LOCUS       DASQJI010000001         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1535891,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000001 DASQJI010000000
VERSION     DASQJI010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535891"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(309..1313)
                     /locus_tag="VEV83_00005"
     CDS             complement(309..1313)
                     /locus_tag="VEV83_00005"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HYK43516.1"
                     /translation="MKNILAYGDNYDVLRDFIANQNIAGKIRLVYLDPPYGTKQEFTF
                     SDDRFSTISRMNGGKIAYTDNLTGEDYLQFLSSRLILIRDLMANDGSIYLHVDNKMGH
                     YVKVLMDKIFGQHNFINHIIRIKCNPKNFSRAGYGNMTDMILFYSKTKKYVWNEPRQK
                     IEIPENDARFRSIASDGRRYTTTPLHAPGETAKGETGKIWKGMMPPKGRHWRYTPAVM
                     DELDEKGLIEWSSTGNPRKKIYADDVMKAGVKMQDIWLFKDPQNPKYPTEKNLELLKT
                     IIKASSNQDDTVLDAFAGSGTTLVAAQDLNRRFIGIDASNAAIDICKKRVSDFDYRSV
                     "
     gene            complement(1411..>1616)
                     /locus_tag="VEV83_00010"
     CDS             complement(1411..>1616)
                     /locus_tag="VEV83_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43517.1"
                     /translation="YVDQLSINNAGQTITVKYSNYKKTDFGNLMPFKEQIISPEGSVD
                     ITFSKVEINKPVDPSFFDEPKKQ"
BASE COUNT          429 a          340 c          353 g          494 t
ORIGIN      
        1 cctatcgcag gcggcggctg attttttccg ccattagcgc caggaaattg cgcgaatatg
       61 ttaagagaga ttattaaagt agcggttgcg aggaaaacct ttttcataca cgtgtttttg
      121 aactgaggca caaaactatt caacagtaaa tgcgattttt agcaaatgag acgagcgcat
      181 gaaatgatgc gacaaacggt ggctcttcgc aaaaaattga atgtccgctt tgaccgcaag
      241 tatgaggaaa tgtgaaagat ttaaaaaatg gaggatggat tggaagtgcg gaaatataaa
      301 aaaccgcttt acacactgcg gtagtcgaaa tcggatactc gtttcttgca gatatcgatg
      361 gcggcattag atgcatctat gccaataaag cgacggttta agtcctgcgc ggcaacgagc
      421 gtggtaccgg agcccgcaaa agcgtccagt accgtatcat cctgattgga cgaagcctta
      481 ataatcgtct tgagcaattc caggttcttt tcggttggat atttggggtt ttgcggatct
      541 ttaaataacc agatgtcctg catttttaca cctgccttca tcacgtcatc tgcgtaaatt
      601 tttttgcgcg ggttaccggt agatgaccat tcgatcaaac ccttttcatc aagctcatcc
      661 attacggcag gtgtgtaacg ccagtgcctt ccctttggcg gcatcatgcc cttccatatc
      721 ttcccggttt ctcctttcgc ggtttcgccg ggcgcgtgca aaggcgttgt tgtatatctt
      781 ctgccgtcgg aagcaataga acgaaaacgt gcatcattct caggtatttc gatcttttgt
      841 cgtggttcgt tccaaacgta tttttttgtt tttgaataaa agaggatcat gtcggtcatg
      901 ttcccgtagc ccgcccttga gaaatttttt ggattacact taatgcggat aatatgatta
      961 atgaaattat gttggccgaa tatcttatcc attaggactt ttacataatg ccccatctta
     1021 ttgtcgacat gcagataaat gcttccgtca tttgccatca gatcacgaat gagaattaaa
     1081 cggcttgaaa gaaactgaag ataatcttct cctgttaagt tgtccgtgta tgcaatcttg
     1141 cctccgttca ttctgcttat cgtcgaaaat cgatcgtcgg aaaaagtgaa ttcctgctta
     1201 gtcccgtaag gagggtcgag gtacaccagc cttatctttc ctgcaatatt ttggtttgcg
     1261 atgaaatcgc gaagcacatc ataattatcg ccgtatgcca aaatattttt catgcacaaa
     1321 tcttcagcaa acgtatcaaa cgatgacttc ttcgttgcag gaagttttca accgatgtag
     1381 aattgatgcc aacattccgg gaattgaacg ctattgtttc ttcggctcgt cgaaaaatga
     1441 ggggtcaaca ggtttattga tctcgacttt actgaaggtg atgtcgactg aaccttccgg
     1501 cgatatgatc tgctctttga acggcatcag atttccaaaa tccgtttttt tataattgga
     1561 atatttcaca gtaattgtct gtcctgcgtt attgatcgac agctgatcaa cataat
//
LOCUS       DASQJI010000002        29655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2611029,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000002 DASQJI010000000
VERSION     DASQJI010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 29655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29655
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2611029"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="VEV83_00015"
     CDS             complement(<1..867)
                     /locus_tag="VEV83_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43518.1"
                     /translation="MERILFGDNQFFAVSHISDEKSRAQSIKFKDDEAIIRTLDIARE
                     EGINTFMCTTHDRIGNICDIIRANPQKYEHYKIFPCMPYAHKYANAVTELGIAGAMKQ
                     YVPGNFIGSLFKGGVAFLSKDYLSIMELMIDAEMKMFKGIKTPVIFLQNVVTDLLLGL
                     GATSVLKAFHDYVEKKYDAEAGFITMNMPMLLEKLEEAGIENPIICSSINSAGFRMSG
                     GKELYEQTLRTKKLRAIAMQVLGGGAINPKEAIKYVCSLPNISSILFGASSKANIAQT
                     THLIREFDSDTVL"
     gene            complement(871..1881)
                     /locus_tag="VEV83_00020"
     CDS             complement(871..1881)
                     /locus_tag="VEV83_00020"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK43519.1"
                     /translation="MIKVALIGAGKMGISHLSILGAHPDVNVVGVCDSSKMVTDAIGK
                     YTSFPVFSDAEKMIDKIRPDAVFVAVPTKYHYTLAKSFLKNRIHVFAEKPLCLSPSES
                     EELVKLAAENKCVNQVGYHNKFIGTFQQVKQIVSNGYLGNIYHFTGEAYGPVVVKKKQ
                     DTWRSDASEGGGCLMDYAAHVIDLINDILSPVENSKGSFLKQVYSTGVEDSVYSLLEL
                     SSKVTGVLSVNWSDDTYRKMSTSITILGTNGKIISDANELKVFFKGSNFPEGYSKGWN
                     VKYITELTGPVDFYLRGEEYSAQVDYFIKACLGKVPNNINTFQTAWQTDKAISIIKNS
                     SK"
     gene            complement(1878..2630)
                     /locus_tag="VEV83_00025"
     CDS             complement(1878..2630)
                     /locus_tag="VEV83_00025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HYK43520.1"
                     /translation="MTNGYKTVSVMGLTVFSDNLVKIPIAGEKCRVINCSISPNSYTL
                     ALKDAEFRDALKKTDFPVLDGVYFALASILLQGKNIKKNQGPEVYRHFIARLNETSGK
                     AFFLGSSEMVLQKIKDRLAKEYPNITVESFSPPFKKEFSKEDNDDMVSRINKFNPNIL
                     FVGMTAPKQEKWAVKHRDRLHCNLVVSIGNVFDWYAGTQKEIHPIFFKLRIAWLVRIF
                     LRPEILKRNLGNQMLFFWHLVLVFLKIKKEPK"
     gene            3036..3878
                     /locus_tag="VEV83_00030"
     CDS             3036..3878
                     /locus_tag="VEV83_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43521.1"
                     /translation="MEKTKVLYIMGIGRSGSTILGIVLGNLKEYFFAGEMQLWIESKG
                     VPTEREDAIKYWEKIAVNIPDREDYFNTDFENQLEFHTTVPALFGSRDRPIIRKFHKL
                     SEELFNSIRKVTGCTVIVDSSHYPLRAYWLNKNPALDMHYLYLYRDPVDAINALMKKN
                     VEQIPKSFFGANLYLFVVSVLSNFVYMTIRRGKKMKLRYEDLISCPNAVLARVQQLLK
                     TAPDTVDVNDLSTGHIFRANRIRLYKKIKLETEIKRPKTNFFSKSLIYLLHFPFMLLN
                     RKQC"
     gene            3905..4672
                     /locus_tag="VEV83_00035"
     CDS             3905..4672
                     /locus_tag="VEV83_00035"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HYK43522.1"
                     /translation="MVISHKYKYVFVELPLSGSTAVSNELCDLYDGEKILRKHSKYGE
                     FLKIANDEEKKYFVFSGIRHPMDLVVSEFLKVKNNHKQRYTTPSEWRRNGGTLSDENL
                     RLYDEIKNNDLSFQQYFKKYFKLPYDNWSSADHKNFDYIIRFENLRNDFSEVLKRLQI
                     EPARELPQMNKTSEKDDYTKYYTAEIREKAVFVFAPFMKKWGYTFPTDWNAPEPGVSS
                     FILYEILGIAKRIYWKNTESKSAHASSAKKTLVQNGL"
     gene            4662..5420
                     /locus_tag="VEV83_00040"
     CDS             4662..5420
                     /locus_tag="VEV83_00040"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK43523.1"
                     /translation="MGYDSIIILGYKRSGTSLLRVILNSHPEIAIGPEIKFMQVASKR
                     FPGTFDEFMRISERDAKDFAYSRETLRKIYNASKTSDDLLRNWCIEYRDSTGKRIWGD
                     KTPQNFKYLRFLTKKFPDSLYVHIVRHPFDVMISSKKRKQYHGLHTIIAWFVSNWRVR
                     FVNKKNFIFFKYEDFIKDPASYINEILDRLGVQKVDLLSLYQQQDHGKIAEGDWWNKP
                     IQVKPRDESILSAKDKTFINLICFPYLRKYGYLK"
     gene            5454..6368
                     /locus_tag="VEV83_00045"
     CDS             5454..6368
                     /locus_tag="VEV83_00045"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK43524.1"
                     /translation="MPDFIFIGSFKCASSSVHFYLGQHPQIFASTKKETGFFSLHYSK
                     GMDFYAQFFEGAQKDQVLGETTPTYCFLPYVAERIHKHYPNAKLLLCLRNPVERAFSS
                     WLMATGLGRERLPFDAVMEKSKRMYNQMKETLAGPGAEEFWIENNPNAKFAPLEITSI
                     IAGEYAQMLKLYYRYFKPGQIKIIRFEDIYKNLDPTLSDIFSFLGVDPNFVVPNKESV
                     NFYFDRSINEVFYKVFGLKTGRAIIDAVPKSVKNKLKHSLKKPPPKLTMEQRVRYWEF
                     FKDDVAELESMLDADFSYWNPEAKKVAV"
     gene            6403..7338
                     /locus_tag="VEV83_00050"
     CDS             6403..7338
                     /locus_tag="VEV83_00050"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK43525.1"
                     /translation="MTVPNFLIGGPPKCASTSLYFYLNQHPEIFMSPVKQTRFFSEHY
                     DKGTDYYVSNYFSGVNGQKVAGEATPGYFAFPFVTERIYRFNPEMKFIFCLRNPVERA
                     FSGWNMRVGNGTEKLSFQEALKANLQQREQMKFLTEPDTQQWQKNKDHYKMDEVGYRL
                     YIEGSLYAFNLKHYYKFFDPSQVKIIFLESLKIHFEDTIRSIFAFLEVDENYVIKNTE
                     EHNTHKTGKVKSFGRVKRKGKRFSKIISVIPKSLRDKVLAAMFTKSSAEGSKAKLTAS
                     DRKFAYNIFKEDIAELEQLLQVDLSRWKCQEKTSV"
     gene            complement(7330..8391)
                     /locus_tag="VEV83_00055"
     CDS             complement(7330..8391)
                     /locus_tag="VEV83_00055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK43526.1"
                     /translation="MTISNTGLVDPIEKTLVKKKKDRIMIAWVAYQRRVESLSKYCDL
                     NVYYIHYKWEEKSKLYKPLSYIFKIVQTAITLFRTNAKIVFIQLPPTFPLYILVFYCW
                     LKKAVYISDCHNTTFYDGPWIKFPFAKKMLRNSAVVLVHNEDIQEKIKDWGFPYMLLR
                     DPIPQMNVNENIHSVGGINIKEDKYVIFPGSFGTDEPLEELFNAMRLCPDVLFACTWF
                     SEKLSKEQQKTLPANLRLTGFLDEQTFTALYANAAAAIVLTTREGTQPSGAAEAVSLC
                     VPLIISDIATTRRLYSEAGVFVKSNSNSIAEGVNYALSNQDMLRSQVRRLKEKLGSEN
                     NDQLIRFQQRLEQLEQNLD"
     gene            8668..9666
                     /locus_tag="VEV83_00060"
     CDS             8668..9666
                     /locus_tag="VEV83_00060"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK43527.1"
                     /translation="MKGKTLVCGAGGFIGGHLVNRLKEEGYWVRGVDLKANEYGNGNA
                     DEFVIADLRDPKVVEEVVTPDLHDIYQLAADMGGAGFVFTGENDAAIMHNSALINLNV
                     LEEAKRKKVKKIFYSSSACMYPEYNQLDPDNPKCSEDSAYPAAPDSEYGWEKLFSERL
                     YLTYQRNHGIAVRVARFHNIFGPKGTWTGGREKAPAAICRKVAETPDGGVIEIWGDGK
                     QTRSFLIVDECVEGVRRLMESDFSGPVNIGSEEMIAINDFARMVIDISGKQLSVKNIS
                     GPTGVRGRNSDNALIRQKLGWAPSQPLRTGVEETYHWIVGEMRKAAKPQVENFVTA"
     gene            9745..11352
                     /locus_tag="VEV83_00065"
     CDS             9745..11352
                     /locus_tag="VEV83_00065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43528.1"
                     /translation="MHKKKTGIKKIFFQIFCCAFFLSLPAALLFAQTPVLRVTNSFTQ
                     QSVLYNNDTFQHTAWKPVLYTDSTYTKSDRSWLYRKFFEDHLIQVQEPGFNLFGDVVL
                     DLYAGGTKRGIPTETANQHEGKTKTVLMNTRGYMISGNISDNFYFETDLYENQGRFPG
                     YVDSFIHATGVIPFQNRYKNFKNKGFDFTYSTARLVYTPGKHFLFDLGYNTNFIGDGY
                     RSLLLSDYNTPYPYLHVAANFGKFQYSVMWSQYISQGKTDSTIYALGVSRKWGQTYLL
                     DWQATKNLSLGIFNSVVSSVENENHEKQFGLTHFSPIIFLHGSEAPSGLKNNDVAGLN
                     VKYRITPEINVYGQFMVDQLGSAEWENRYGWQLGLHVGNIFGVNGLNAQGEFNTVRPY
                     SYASDTTTTVYAHDNQPLAHPIGANFKEVIGVADYSYKRWWLRAEAFITHYGADSSAN
                     VDYGRDIFKPLYLHSKETDIKTDQGLNTQIYYADFRVAYILNKKNNLRVEAGAVYRSE
                     SNKLYDYKDFYGYIGVRFSFRKLIYDF"
     gene            11361..12995
                     /locus_tag="VEV83_00070"
     CDS             11361..12995
                     /locus_tag="VEV83_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43529.1"
                     /translation="MKRIKNIRTIFLVTGIMLCTQVFAQQIPLNQLVQNRLNELMFEA
                     DSSVFSSFRSMNWLELKQLNIIHKSSLTDSVFGLTTASKSNLGNTNWVLASGKNSTFT
                     IDPYLNLGFGKSSEKDNALTNFSGGIRMQGAFNDKFSFNLDVITNVQQFPSYLDSFIF
                     SKYDRFDTVSTKYIIPGENAATLKNDNRFAYTNFGFNLTYTPNKHFLIATGYGKQFLG
                     DGYRSLLLSDNSNNYPYVRLQARIWKLSYNVLYNRYTNKSWYNVDGDPQPKYSTVHYL
                     GFNAKKFQLGLFDEITWLAKDTNFTRGFDLQYINPLIFMRPLEFAIGSPDNAMIGLNA
                     KYKLYKNGYIYGQVALDDLNLHLSADSNSQFYGNKYALQLGIWNKDIFSVKGLTYRFE
                     WNSVRPYTYGHGVGGNISLNYTHYFQSLTDPFGANFNEIISLFNYSNRRWYAILENLY
                     TVRGENPGVNYNTGEDLWGGELNVVRFGVKTMQGTKTKYSFNQLTAGYLLNPANRLSV
                     EANVAYRSRTSSMVNQKEWYFGIGIKTNIYNFYHDF"
     gene            13034..13519
                     /locus_tag="VEV83_00075"
     CDS             13034..13519
                     /locus_tag="VEV83_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcxB family protein"
                     /protein_id="HYK43530.1"
                     /translation="MRFSFSYNKGKVLQALRYHFIAQSEIRILFIVIILFDIISAVFY
                     FSGKIRPEPFLLGSVIWFVFILSFWFFMPYAVYKKSSTFREAFTISFQPSYVSLENPN
                     GRVEWEWTRFMKYFETPNFFHLYFSAKAFFLVPKDGLTSDTQHELRVLLNSRIQLPLK
                     K"
     gene            complement(13520..13948)
                     /locus_tag="VEV83_00080"
     CDS             complement(13520..13948)
                     /locus_tag="VEV83_00080"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK43531.1"
                     /translation="MAVKLIDHGSGDYRQMVNLRLLLLRKPLGLSFEQEELDKEKDDI
                     LIGCFEDDKLEGCCLLTKLDARTLRLRQMAVVSGLQGKGIGKVLTQFAENIARDRGYK
                     KIIMHARKTAIGFYEKLGYKKSGDEFKEVTIPHYVMEKEL"
     gene            14133..14369
                     /locus_tag="VEV83_00085"
     CDS             14133..14369
                     /locus_tag="VEV83_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008269813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HYK43532.1"
                     /translation="MSDIATRVKKIIVDKLGVEEAEVTNEASFTNDLGADSLDTVELI
                     MEFEKEFNISIPDEQAETITTVGQAVTYLEEHAK"
     gene            14444..15697
                     /gene="fabF"
                     /locus_tag="VEV83_00090"
     CDS             14444..15697
                     /gene="fabF"
                     /locus_tag="VEV83_00090"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HYK43533.1"
                     /translation="MQYDRVVITGMGAITPLGNTVADYWKNLVAGVSGADTITKFDPS
                     KFKTKFACEIKGFDPTQYIDKKEVRRMDPYAQLALAVSDEAMSDAGLVNNNYDPDRIG
                     VILGSGIGGFLSFQEECISYGIANRTPRFSPFFIPKIICDMGAGLVSMRHNLRGPNFA
                     VVSACATSNNAIMEALFHLRLNKADIMVCGGTEMSVCEGGVAGFNAMKALSERNDDPK
                     IASRPYDKDRDGFVIGEACGILILERLDHALERGARIYCELAGAGASADAYHLTAPHP
                     EGKGAIRAMLATFEDAGMQQTDVDYINTHGTSTPLGDIAEVIAIKQVFGDHIYDVNIS
                     STKSMTGHCLGAAGAIEAIASIKAITDGTIPPTINHFTDDPELDPGLNFTFNVAQHRK
                     VRAALSNNFGFGGHNASLLFKEYIP"
     gene            15764..16402
                     /gene="rnc"
                     /locus_tag="VEV83_00095"
     CDS             15764..16402
                     /gene="rnc"
                     /locus_tag="VEV83_00095"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HYK43534.1"
                     /translation="MGIKPGNYSLYYTALSHRSIKEGADENNERLEYLGDAVLSTIVA
                     DYLFKRYPYKGEGFLTEMRSKMVNRQQLNEIALKMGLKKLTIYNKFDSFLKGSQIFGN
                     TLEAIVGAIYLDKGYTKTRKWVLKQLILSYLFVDDLEQIDINLKNRLIGWASKNGKQL
                     EFETLNEKMEGSRRIFTIAVVLDGVILSEARGFNKKDASQVAAQIAIEKLGL"
     gene            complement(16451..17089)
                     /locus_tag="VEV83_00100"
     CDS             complement(16451..17089)
                     /locus_tag="VEV83_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43535.1"
                     /translation="MKRRMMLLISAAMLILAGCSSSKVTSSWKEPENSRNRINKILVV
                     GLFDSQDKVVRAEMEKQLADELKANGINAVTAYNLYGPKYFQDLPEKEVLKKINGNNI
                     DAVITINLVDKNKERQFVPGPRYGGAGYRYNPFLGGWVYKPYYMPYYKSGHFETNVNY
                     NFETNLYSVADKKLIYSVETQSYDPSSISALANDYSKSVVKDIKKKNILTEM"
     gene            complement(17173..17571)
                     /gene="mce"
                     /locus_tag="VEV83_00105"
     CDS             complement(17173..17571)
                     /gene="mce"
                     /locus_tag="VEV83_00105"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009036790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HYK43536.1"
                     /translation="MKHIDHIGIAVKSLAAALPVFEKLLNTKCYKTEVVDAENVTTAF
                     LKTGETKIELLENDSETGPIAKFIDKRGEGIHHIAFEVDDMNAEIQRLESEGFIVINK
                     PRRGADNKLICFLHPKNTHGVLIELCQSVQ"
     gene            17689..18042
                     /locus_tag="VEV83_00110"
     CDS             17689..18042
                     /locus_tag="VEV83_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HYK43537.1"
                     /translation="MNEVTEENITASERAQIKIAELMKQAGVAEDPSYFLRVSVVGGG
                     CSGLSYKLDFDNELKPADQVFEAGDVKLVTDLKSLLYLINTELDFSDGLNGKGFYFKN
                     PNASRTCGCGESFAV"
     gene            18228..21221
                     /locus_tag="VEV83_00115"
     CDS             18228..21221
                     /locus_tag="VEV83_00115"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK43538.1"
                     /translation="MTANRLLKALILCPALLLAAFVSQAQTKTITGKVLDEKGNAVTG
                     ASIVVKGGKSGTTSDATGSFKLAVPTTATAITVSYVGYVPRDVDVSTTTDVSVSLSPD
                     NTSLTDVVVIGYGTAKRKDLSGSYSTVTAKNFNKIPATTPDQLLQGKVPGLQVTVASG
                     APGSVSQVRIRGNNSIRAGTEPLYVVDGVPLDGRSARPGFSSISGLGAIPESNPLSYL
                     NPNDIENISVLKDASASAIYGSRGANGVIQITTKSGTSGPSRFDINTSWGIAGLMTQP
                     DVLDVGQYREALSKYGAHSDSGASINPFDAIIRHKLSQNYSIAFNGGGTERSRFRASF
                     FASSLPGIIDKTQLDKYIGNINGSYKFIDDKLTLKFGLTAANTKEQIAPISNDPGSTG
                     NLVSLSMQWNPTLLLQRGETQYTVNPNGQVNPALLSKAYNDYAVVTTLLGNISAGYKL
                     LPELEYQFFYGVNYSTGTRGQELQGYITGTGGNADGKGLANTGSAELFSQTITHTLTY
                     SKRINDLSVTALAGYEYYSTKYKSQSTSVYQFDYNLSLSNLVPIHYYDNMQDGKQSNL
                     TTSSSNDPTTELQSYFGRVILSYRNKYTVSASIRADGSTKFGENNRYAYFPAVSGKWQ
                     ISEENFMSGGHVFSNLALRVGWGKTGNQSFPSGASQDRYKYNSNGSLGVVNFANPDLK
                     WETVTSTNGGIDFGFMNNRLTGTIDIFFKKTTDPLFPGTLAAPAPAGVLWQNLPGYVS
                     NKGGEIGVNWQIIQNKDFAWSVNPTATYVKNKFVFPEAGEGPLVLTGNLNGKGTSATW
                     VQAIADDQPINVFYLRQFHGFDKDGFAITDNFASYAGDPNPKWVVGITTEVDYKNLSL
                     TVNMHGAYDFFIYNNTIQSVTGLSFITNGSNISKTLIGSPENIANPVSASTRFMLSGN
                     YMKLGNATVNYKVGDLGKVVKNLNVYVTGVNLFTLTKYPGFDPEVNVSKSDINGTGIP
                     SIGIDYVGYPTPRTFIFGLSLSLGN"
     gene            21257..22912
                     /locus_tag="VEV83_00120"
     CDS             21257..22912
                     /locus_tag="VEV83_00120"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK43539.1"
                     /translation="MNINNKFLTIVTALVIASGCTKLNEDFNDSINNPGSGGNTDVTA
                     LLNNAYNDMNTPFNNQDQIFSLEENVTDECLVPTRGGDWDDNGVWRVLHAHSWDVTHQ
                     QAQSVFINLGKLESDATTVLAFKPSQEQAAEALFLRSLAQFYLLDLYAQVPYRTVEKY
                     NSIDAAPVLEPAAAIDTLVANLTQIIPQLSDANQPYKASPNAARFLLMKVLLNKQAFL
                     NRESPGTADNGDMTQIINLGNDIINSGTSNSATGAPLQFTPHYFDNFGPNNGGADPAY
                     GFGVGAEMIFAFPNLPGVSNNNGRNSVGVNARWMMTLHYNSYGHPGDGVYGGAGWNGF
                     STIADFYNAFDASDTMRRGNVPYPGVTNTSGLKVGLLEGQQYDENGQIRVDRNGNPLQ
                     FNPEVHLVEPDPLTLEDNGIRIIKYAPDYQNYTGGQQGNQLQLFRLADVYLMMAEAYL
                     NQGDAASALAKVNEVRAARKAAPLASLSLVNAGNLYDENTLLAERQKELYWESWRRQD
                     LIRMGVYLQPWALKEADDAKYLLFPIPSTQLIVNPNLTQNPGY"
     gene            22978..26313
                     /locus_tag="VEV83_00125"
     CDS             22978..26313
                     /locus_tag="VEV83_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK43540.1"
                     /translation="MKFILPLPFLSSLVFLFSCRSDSKQLLFTLEQNTGIDFNNKVVD
                     GNIENSFLFRNFYNGGGVAVGDLNNDGLPDVFLTSNMGDNKLYLNKGNFKFEDITANS
                     GIKQDSMWSTGVEFVDINHDGWLDIYVCNSGHMKNGNRRNKLYINNKNLTLTEESAKY
                     GLDISAYTTQVSFFDYDLDGDLDCFMINNSPMPVNNLGYDNRRSLPQEQWQVASFLKG
                     GGDHLYRNDNGHFREVTQEAGIHGSLISFGLGVSVGDINGDGFADIYVANDSYERDYL
                     YINQKNGTFKDEFETCIAHTSFSSMGADIADINNDGYPEIFTTDMLPGDDFRLKTLGA
                     FDNIDVFRKKVNQGLYYQYMKNCLQLNNGDGTFSEIANYSGVSATDWSWGALMFDADN
                     DGLNDIYVCNGVNRDVTNLDFMDFFANEVIQKMILTGKKDNVDEVLKQIPVNPMINKC
                     FKNEGNLKFKDVGLDWGFTKPSFSNGAAYADLDNDGDLDLVINNENQPAFIYKNNSRE
                     INHNHSISFLLKGDSLNTFAVGSTIKIYAGKHIFSRELIPARGFQSSVDYKQLIGLGN
                     ISKIDSAVVIWPDHSFNKYTSLKIDSFYTIHKAANRNFYPFAGVQTMKPLFDSVKNNF
                     DKHEEDDYVDFYYERNIPEMLSREGPRAAVGDVNGDHLDDVYIGGTKDHVGCLYIQQA
                     DGSFTKKVEPAFAPFLDFEDEAVLFFDADKDGDLDLFVGPGGNDNPPYSREMQNRFFK
                     NDGKGNFALDADAFPSNGMNTGAVAAYDFNHDGYTDLFVGGRSDPRNYGGDPASYMYL
                     NDGYGHFKDIAKTKNPDLAKIGMVTGAVWADVKGDSSKELIISGEWMSPKIFSYNGDH
                     FVEVQTNIKNLNGLWKTVVATDVNNDGKTDLIFGNIGENFYLQPDEKKPVKLWLNDFN
                     QNGNYDKVLTRTVDGQDMPVFLKHDMQDEIPSIKKQNLQHYDYAKKSIQQLFSAELLK
                     GAVVKTFNYCSSVVALNEGDGKFRIQKLPVSAQLSNVNSICVTDINQDGFPDLVIGGN
                     EENFPPQFGRLDAGFGDVLINNGKGNFISVDSKQSGIKVPGMIKDVCAVHGSNETYLL
                     FLRNNNFPMLYRAHNFFQKNLNQ"
     gene            26392..>29655
                     /locus_tag="VEV83_00130"
     CDS             26392..>29655
                     /locus_tag="VEV83_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK43541.1"
                     /translation="MNWSCNTPAKSPVAFSLLTSKETGLDFTNKLTPSNSFNVFHYMY
                     FYNGAGVAAGDMNNDGLIDLFFASNQGQNKIYINTGKMHFKDATREAHIPNDSGWNTG
                     VSLVDINNDGLLDIYICRVGKYEILNSHNEFLVCKGIDRNGVPYYQDEAKQYGLDFSG
                     FSTQAAFFDYDGDGDMDMYLLNHSIHQNGTFGARKIMINTKSPVSGDHLYRNDDGRFT
                     DVTKQAGINSSILGYGLGICIADINMDGWPDVYIGNDFHEKDYLYINNHDATFKEEDS
                     TCFMHTSQYTMGVDVGDINNDALPEIVSMDMLPSDPYILKRSEGEDENDIFNLKIKYG
                     YSYQYTRNNLQYNRGNGVFSDVGLYANVAATDWSWSPLWIDFDNDGLKDLFVSNGIPK
                     RLNDIDYINYVSNDQVQMDIRLNNLNSKDMSLISKFPEIKIPDKFFRNDGSLQFTDLA
                     ASIKNDQPTFSNGAAYADFDNDGDMDIAINNIDSDAMIYENKSNDGRKDYIELKLKGT
                     PKNVNAVGSKVIVFAKNDVRTYEKFPVRGFMSSSEIPVHIGLNKVTVDSVVLIWPDNS
                     YQTIDWRADTGKIKTINYTPGLSQFNYAELARCSTNQTLPVENITHDVGLNYVHTENQ
                     FPEFDREPLIPHMTSTEGPALAVADINHDGLDDVFIGAAKRIKPAFFMQQPSGKFQKI
                     NEPALDKDSGYEDVSACWTDVNNDNNPDLVVASGGNEFYGTDSNLLPRIYLNDGNGDL
                     VRKYDAFTNIYTAQSCVVPYDFNADGRVDLFIGGRVVPFHYGETPQSYLLLNDGSGKF
                     KDVTNQYAKGLSSVGMVTNAIWYDLDKDGDDDLVLSLEWDGIIAFMNDHGHFTKKYLT
                     DKKGWWNFVMACDLDNDGDVDLIAGNLGLNSRLKASDAQPVRLYINDFDDNGNKEQVL
                     TYYLDNKEIPFANKDELQKQMPGLKKKYLYAGDFAKASLTDLFSESKLKSSTMLSANW
                     FYNTIFINDGKMNFKPIPMPVNAQLSPYRTGTVVDANHDKLPDVLLGGNYYDSNIQMG
                     RYDADYGTILLNEGNDRFLATTLNGLTVKGQVRCIKPIQLKNNRAAFVFARNDDSTLV
                     "
BASE COUNT         8727 a         6026 c         6539 g         8363 t
ORIGIN      
        1 taacacggtg tcgctgtcaa actctcttat caggtgagtg gtttgcgcaa tgttagcctt
       61 agaagatgcg ccgaataaga tcgacgagat atttggtaac gagcaaacgt acttgattgc
      121 ttcttttgga ttgattgcac cgccacccaa aacctgcatc gcgatcgctc ttaatttttt
      181 cgttcttaat gtttgctcat ataattcttt tccgccggac attcgaaaac cggctgaatt
      241 tatcgacgag caaattatcg ggttctctat gcctgcctct tccaattttt ccaaaagcat
      301 tggcatgttc atcgtgataa agccggcctc ggcatcatat ttcttttcaa cgtaatcatg
      361 aaaggctttc aaaacactcg tcgcacccaa tccaagcaac aggtcagtga ctacgttttg
      421 caaaaagatg accggtgtct tgatgccttt gaacattttc atttcggcat cgatcatcaa
      481 ttccatgatg gacagataat ccttcgacaa aaaagcaacc ccgcctttga acaatgagcc
      541 tatgaaattt cccggtacgt attgcttcat agctcctgca atgcccaatt cagtaactgc
      601 gtttgcatac ttgtgcgcat aaggcatgca cggaaaaatt ttgtagtgct catatttttg
      661 cggattggct cttatgatgt cgcagatgtt accaatgcgg tcgtgcgtag tgcacataaa
      721 cgtgttaata ccttcttctc ttgctatatc gagcgttctg atgatcgcct cgtcatcctt
      781 aaattttatt gactgcgccc gcgacttttc atcactgatg tggctaactg caaaaaattg
      841 attatcgcca aacaaaattc tttccatgac ttattttgag ctgtttttta tgattgatat
      901 cgccttgtcg gtctgccacg ccgtttgaaa cgtattgatg ttattgggca ctttacctag
      961 gcacgcctta atgaaataat ctacctgcgc agaatattct tcgccccgca aataaaaatc
     1021 gacgggcccg gtaagttcag ttatatattt tacgttccag cccttggaat atccttccgg
     1081 gaaattcgat cctttgaaaa agaccttgag ttcattcgca tcagaaatta tttttccgtt
     1141 tgttcccagt atcgttatcg atgttgacat tttgcggtag gtgtcatcgc tccagttaac
     1201 tgagagtacg cccgtcactt tcgaggaaag ctccaggaga gaataaacgg aatcttctac
     1261 gccggtggaa tacacctgct ttaagaaact gccctttgaa ttttcgaccg ggctgagaat
     1321 atcgttgatg aggtctatta catgagccgc ataatccatc aaacaaccac ctccttcaga
     1381 agcatcagaa cgccaggtat cctgtttctt ttttaccacg accggtccgt aagcctcacc
     1441 ggtaaaatga tagatgttgc ccaggtatcc attgcttacg atttgtttta cttgctgaaa
     1501 agttcctatg aatttgttgt gatagccaac ctggttcaca catttatttt ctgcagcgag
     1561 ttttacaagt tcttcgcttt cggaagggga taagcacaat ggcttttctg caaaaacatg
     1621 gatgcgattc tttagaaaac tttttgcaag cgtataatga tacttcgtgg gcactgcaac
     1681 gaacaccgca tccggccgta tcttatcgat cattttttcc gcgtcagaaa aaacggggaa
     1741 ggaggtgtat ttaccaatgg catctgtgac catctttgac gaatcgcaaa ctccaacaac
     1801 gttaacatcc gggtgcgctc ctaaaatact caaatgtgaa atacccattt ttcctgcacc
     1861 gatcagtgcg acttttatca tttcggctct ttttttattt ttagaaatac caataccagg
     1921 tgccagaaaa acagcatctg atttccaaga tttcttttga ggatctcagg acgcaggaaa
     1981 attctgacca gccatgcaat gcgcagtttg aaaaagatcg gatgaatttc tttttgagtt
     2041 ccagcgtacc agtcaaatac atttcctatg ctgacaacca ggttacaatg gagtcggtct
     2101 ctgtgtttca ccgcccactt ttcctgtttt ggcgccgtca tcccaacaaa caaaatgttg
     2161 gggttaaatt tgtttattcg cgacaccata tcgtcgttat cttcttttga aaactctttt
     2221 ttaaaagggg gagaaaaact ttcaaccgta atgtttgggt attctttcgc caacctatcc
     2281 tttatcttct gcaaaaccat ttctgacgaa ccaagaaaaa atgctttccc tgacgtttca
     2341 tttaaccgcg cgataaaatg cctgtaaact tccggaccct ggtttttctt gatatttttt
     2401 ccctgcagta aaatggatgc taaagcaaag tatacgccgt cgagcaccgg gaaatccgtt
     2461 tttttaagcg catccctgaa ctccgcgtct tttaaggcga gggtgtagct attcggactt
     2521 atgctgcaat tgatcacccg gcatttctct ccggcaatag ggattttcac caggttatcc
     2581 gaaaatacag taagccccat tacagatact gttttatatc cgttcgtcat cgtttactaa
     2641 tattttggcg actgattatc aactaccaat tatctgactg tatcgtacca ggtaacatct
     2701 gcaaattata cacttaattg ccaaggatta gctcattggc aggggtggca aaggtaatag
     2761 aaatcttata atccttaggt gctggctcgg tcaaaatcaa acaaatcttt acgcaaattt
     2821 ttgaattggt taattcttta ttttgcgcct ttaacttatg taaaagcttt tatcatgcga
     2881 tctgatttct tatatgccgc ccccggcttc ctggaagatc agcaataacc gaataacgca
     2941 gttttccgcc ttgaaaaaaa atctaaaaag ataatatcga aagcctgaac ttcgccgctt
     3001 cgcaagagcg aatgcgccgt tttaagtaag attgaatgga aaaaacaaaa gtgctttaca
     3061 taatggggat cgggaggagc gggagtacga tattgggcat cgttttagga aatttaaaag
     3121 aatatttttt tgcaggcgaa atgcaactat ggatagaaag taaaggcgta cccactgaaa
     3181 gagaagatgc gatcaagtat tgggagaaga tcgcggtcaa tatccccgac cgcgaggatt
     3241 atttcaacac tgattttgag aaccagttgg aattccacac aacggtgcct gctcttttcg
     3301 gttcgcggga ccggccgatc atcaggaagt tccataagct gtcggaagag ctctttaatt
     3361 cgataagaaa agtgaccggc tgtacggtaa tagttgattc atctcattat cctttgcgcg
     3421 catactggct gaataagaac cctgcgctcg acatgcatta tctctacctc tatcgcgacc
     3481 cggttgatgc gatcaatgca ctcatgaaga agaacgttga acaaatacct aaaagctttt
     3541 tcggtgcgaa tttgtatttg ttcgtggtgt cggttctttc aaattttgtg tatatgacga
     3601 taaggagagg caagaaaatg aagcttcgtt atgaagacct gatcagttgt cccaatgcgg
     3661 tgcttgcccg ggtgcagcag cttttaaaaa cagcgcccga taccgtagat gtaaacgatc
     3721 ttagtaccgg ccacattttt cgtgcaaacc ggatcaggct gtacaaaaaa ataaaattgg
     3781 aaacggagat caaaaggccg aagacaaatt ttttttcaaa gagtttgata tatcttctgc
     3841 attttccgtt tatgctttta aaccgcaaac aatgttaagg agcggatgtt aatcaaggtg
     3901 aagaatggtt atatctcata agtacaaata tgttttcgtt gaattgccgc tgagcggctc
     3961 gaccgcggtc agcaatgagc tgtgtgatct ctatgacggc gaaaagatct tacgaaagca
     4021 ttctaagtac ggcgagtttt taaagatcgc gaacgacgaa gaaaaaaaat attttgtttt
     4081 ttcgggcatc cgccatccga tggacctggt tgtaagcgaa tttttgaagg tcaaaaacaa
     4141 tcataagcaa cgatacacaa ctccttcaga atggagaaga aatggtggaa ctttgtctga
     4201 cgaaaatttg aggttgtacg acgagatcaa aaacaatgat cttagcttcc agcagtattt
     4261 taagaagtat ttcaaattac catacgataa ctggagcagc gcagatcata agaattttga
     4321 ttacatcatc aggttcgaaa acctgcgcaa tgattttagc gaggttttga aaaggttaca
     4381 gatcgagccc gcacgcgaac ttccccaaat gaacaaaacg tcggagaaag acgactacac
     4441 aaaatattac actgcagaaa taagagagaa agcagtgttt gtttttgcac ccttcatgaa
     4501 aaaatggggc tatacattcc cgaccgattg gaatgcgcca gagccgggcg tttcttcatt
     4561 cattctctac gaaatattgg ggatcgcaaa acggatatac tggaagaaca cggaaagcaa
     4621 atctgctcat gcatcatccg caaaaaaaac acttgttcaa aatgggctat gacagcataa
     4681 tcatcctcgg atacaaacgc tcaggtactt cactgcttcg cgtaatcctt aattcgcatc
     4741 cggagattgc gattggaccg gaaataaagt tcatgcaggt tgcatctaaa agatttccag
     4801 gcaccttcga tgagttcatg cgcatttcgg aaagagatgc aaaggacttt gcatattcga
     4861 gggaaacctt gcgcaagatc tacaatgcca gcaaaacttc agatgatctg ctgcggaatt
     4921 ggtgtatcga atatcgggac agcaccggta aaaggatctg gggtgataaa acgccgcaga
     4981 acttcaagta cctcagattt cttaccaaaa agtttccgga tagtttatat gtgcacatcg
     5041 ttcgtcaccc ttttgatgta atgatatcat ccaaaaaaag aaagcagtat catggtttac
     5101 acacgatcat cgcatggttt gtgtcaaact ggagagtcag gttcgtgaac aagaaaaact
     5161 tcattttttt taagtatgag gatttcatta aggaccctgc atcgtatata aatgaaatac
     5221 tcgacaggct tggcgtgcag aaagtcgatc tgctttcctt gtatcagcag caggatcatg
     5281 gaaagatcgc ggagggagac tggtggaaca agcctataca agtcaagcca agggatgaaa
     5341 gtattttgtc ggcaaaggat aaaacattca tcaacctgat ctgttttccg tatctaagga
     5401 aatacgggta tttaaaataa tggaataact cttaacctgt gaaggtttaa actatgcctg
     5461 attttatttt tatcggttcg ttcaagtgtg catcttcgtc ggtgcacttt tatttggggc
     5521 agcatcctca aatatttgcg tctacaaaaa aagaaacggg ttttttcagt ttgcactaca
     5581 gcaagggaat ggatttttac gcgcagtttt ttgaaggcgc acaaaaagac caggtgttgg
     5641 gcgagaccac gcccacttat tgttttcttc cttacgtcgc tgaaaggatc cataaacatt
     5701 acccgaacgc caaactgctg ctttgccttc gtaacccggt cgaacgggct ttttcaagtt
     5761 ggctgatggc taccgggctc ggccgtgaac ggcttccttt tgacgccgtg atggaaaaaa
     5821 gtaagcgcat gtataaccag atgaaagaaa cgcttgcagg accaggagct gaagaatttt
     5881 ggatcgaaaa taatccgaat gcaaaatttg ctccgctgga gatcacgtcg atcattgccg
     5941 gtgaatacgc gcaaatgcta aaactctatt acaggtattt taaaccagga caaataaaga
     6001 tcatccgctt cgaagacatt tataaaaatc tagatccaac gctgtcagat attttttctt
     6061 tcctcggcgt ggatcccaac ttcgtggtac cgaacaaaga gtcggtaaat ttttattttg
     6121 acaggtcgat caacgaagtt ttttataaag tctttggttt gaagaccggc cgcgcgataa
     6181 ttgatgcagt accaaaatca gtgaagaaca agttgaaaca ttcactcaaa aaaccgccac
     6241 caaagcttac gatggaacaa cgtgtaaggt actgggagtt ttttaaagac gacgttgcgg
     6301 agcttgaaag catgctcgac gcagattttt catactggaa cccggaagcg aaaaaagttg
     6361 cggtttaaaa aaattgaagc aggtagaatt aaatgatcag cgatgacagt tccaaatttt
     6421 cttataggtg gtcccccaaa atgtgcgtct acttcattgt atttttattt gaatcagcac
     6481 ccggaaatat tcatgtcgcc ggtgaagcaa acacgtttct tcagcgagca ttacgataaa
     6541 ggaacagatt actacgtcag caattatttt tctggtgtta acggtcaaaa agttgccggc
     6601 gaagccacgc ccggatactt cgcgtttccg tttgtaacgg aacgtatcta caggttcaac
     6661 ccggaaatga aatttatttt ttgcctgcgt aaccctgttg agcgcgcatt ttcagggtgg
     6721 aatatgcgtg tcggcaatgg taccgagaaa ttgtctttcc aggaagcact caaggcaaac
     6781 ctgcagcaaa gagaacagat gaaatttctg actgagcccg acacacagca gtggcaaaaa
     6841 aacaaggacc actacaaaat ggatgaagtg gggtaccggc tgtatatcga aggaagctta
     6901 tatgcattca accttaaaca ctactacaag ttttttgatc cttcgcaggt aaaaattatt
     6961 ttcctggagt ctttaaaaat tcattttgag gacactatcc gatccatttt tgcatttttg
     7021 gaagtggatg aaaattacgt catcaaaaac accgaggagc ataacacgca taagacggga
     7081 aaagtaaaat cgttcggccg tgtgaagcgg aaaggaaaaa gattttcgaa aataatttcc
     7141 gtaataccaa agtctctgcg agacaaagta cttgcagcga tgtttacgaa gtcttcagct
     7201 gaaggaagta aggcaaaact tacggcaagc gacagaaaat ttgcttacaa cattttcaaa
     7261 gaagacatag ctgaactcga gcaattattg caagtggacc tgtcgcgctg gaagtgtcag
     7321 gaaaaaacgt cagtctaaat tctgttccag ttgctccagt cgttgttgaa atctgatcaa
     7381 ctggtcgttg ttttcactac ccagcttttc ttttaaacgc cgcacctgcg atcgcaacat
     7441 gtcctggttg ctcaaagcat aatttacccc ctctgcaatt gaattactgt tactttttac
     7501 aaatacacct gcttcactgt aaagccttct ggtggtggca atatcagaga ttatgagcgg
     7561 aacgcatagt gacacagctt ctgcggctcc gctgggttgt gtgccttcac gcgtagttaa
     7621 aacgatcgcc gctgctgcgt tcgcataaag tgcagtgaaa gtttgttcgt cgaggaaacc
     7681 cgtcagccgc aggttcgccg gaagcgtttt ctgctgttct ttactaagct tttcgctgaa
     7741 ccatgtgcag gcgaacagca catcggggca tagcctcatc gcattgaaaa gttcctctaa
     7801 cggctcatcg gtgccaaaac tgcccggaaa tatgacgtat ttgtcttctt tgatattgat
     7861 gccaccaacg ctgtgaatgt tttcattcac gttcatttgc ggtataggat ccctaaggag
     7921 catgtacgga aatccccaat cctttatttt ttcctgaatg tcttcattgt ggaccagcac
     7981 aaccgcggag tttcgcaaca tcttctttgc gaagggaaat tttatccatg ggccgtcata
     8041 aaatgtggtg ttatgacagt ctgatatata aaccgctttt ttaagccagc agtagaatac
     8101 caatatatat aacggaaacg taggcggaag ctggatgaaa acgattttcg cgttcgtcct
     8161 aaaaagtgta attgctgttt gaacaatttt aaaaatatag gataatggct tatacagttt
     8221 agatttctct tcccatttat aatggatata gtatacgttg agatcacaat atttggacaa
     8281 cgattcaacc cttctttggt acgctaccca cgctatcatg atgcgatctt tcttcttctt
     8341 aaccagggtc ttttcaatcg gatcaacaag gccggtattg gatattgtca cggtaattta
     8401 ttagttgaag aattgcggtg ttcctgtttg atgcatgctg atttttacaa atgaaagaaa
     8461 aaatcctgta tgcaaaaaat aacttgttgt attacaattg ccgaaccgaa agccgtaggt
     8521 tttatgataa ggataaggtt tatttgcgga agagtaaacg cagattaatt gctgaccgtt
     8581 tttattgttg agaaagctga ggattatagt gattattaaa agaataataa atattttgcg
     8641 cacttaaata aaacagcaat atcatctatg aaaggaaaaa cacttgtttg cggagctggt
     8701 ggttttatcg gtggccatct tgttaaccgc ctgaaagaag aaggttattg ggtgagagga
     8761 gttgacttaa aagcgaatga atatggcaac ggcaatgccg acgaattcgt gatcgccgac
     8821 ctgcgcgatc cgaaggtcgt tgaagaagtc gttactccgg atctgcatga catttaccaa
     8881 cttgccgctg acatgggcgg agccgggttt gtttttaccg gcgaaaacga cgcagccatc
     8941 atgcacaaca gcgcgctgat aaacctcaat gtcctcgagg aagcgaaacg aaaaaaagtc
     9001 aaaaaaatat tttattcttc ttcggcatgt atgtacccgg agtacaatca gcttgatccg
     9061 gacaacccta aatgttcaga agattctgct tatcccgctg cacccgacag cgaatacggc
     9121 tgggaaaaat tgtttagtga acgtttgtat cttacttatc agcgtaatca cggtatcgcg
     9181 gtgcgcgttg ccaggtttca taatattttc ggtccgaaag gtacgtggac cggcggccgc
     9241 gaaaaagcgc cggcggcgat ctgccgaaag gtggcggaaa ctcctgatgg cggcgtgatc
     9301 gagatatggg gcgatggcaa acaaacgcga tcatttttaa ttgtcgatga atgtgtggaa
     9361 ggggtgaggc gcttgatgga gagcgatttt agcgggcccg tgaatatcgg ttcagaagaa
     9421 atgatcgcga tcaacgattt cgccaggatg gttatcgaca tttcgggtaa gcagctaagc
     9481 gtaaaaaata tttccggtcc tacgggtgtc agaggcagga actctgacaa tgcattaata
     9541 cgccaaaagc tgggatgggc tccttcgcaa ccgctgagaa caggggttga agagacgtat
     9601 cactggatcg taggtgagat gaggaaggct gcaaaaccac aggttgaaaa ttttgttacg
     9661 gcataagcag cgccacaagg gaatcgatct tattcaaatc ttttacttta tttttatcgg
     9721 caccaaataa acaggaaaac ctggatgcac aagaagaaaa ccggaatcaa gaaaattttt
     9781 ttccaaattt tctgctgtgc attttttctt tcgttgcccg ccgctttgct gtttgcacag
     9841 acgccggtgc ttcgggtcac aaatagtttt acacagcaat ctgttttata taataacgac
     9901 acgtttcagc atactgcctg gaagccggtg ttatatacag attcaactta cacgaaaagt
     9961 gatcgttcct ggctctacag gaaatttttc gaagatcatt tgatacaagt gcaggaaccc
    10021 ggttttaatc tcttcggcga tgtggttctc gatttgtacg caggcggcac aaaacgtggg
    10081 attcctacag aaaccgcaaa tcagcacgaa ggcaagacca aaacggtgct catgaatacg
    10141 cggggttaca tgatcagcgg aaacatcagt gacaattttt attttgaaac agacctgtac
    10201 gaaaaccagg gccggtttcc cggctatgta gacagcttta tccacgcaac cggcgtaatt
    10261 ccatttcaaa acaggtataa aaattttaag aacaaaggat tcgactttac ctattcaacg
    10321 gcacgtttgg tatacacgcc cggaaaacat tttttgtttg acctgggata caatacaaac
    10381 ttcatcggcg atggttaccg gtcgctatta ctatctgact ataatacacc atatccatac
    10441 ctgcatgtcg ccgcaaattt tggaaagttt cagtattcgg tcatgtggtc gcagtacatt
    10501 agccagggca aaacagacag caccatttat gctttaggtg tctcaagaaa gtggggccaa
    10561 acttatttgc tcgactggca ggcgaccaaa aatctttcgt tgggaatttt taattccgtt
    10621 gtatcgtctg tcgaaaatga aaaccatgaa aagcaatttg ggctaaccca tttcagcccg
    10681 attatttttc tacacggatc tgaggccccc tcaggtctta agaataacga tgtcgccggt
    10741 ttgaatgtaa aatacaggat aaccccggag ataaatgtgt atggacagtt catggttgat
    10801 cagttgggaa gtgccgaatg ggagaatcgt tatggatggc aattaggctt acacgttgga
    10861 aacatttttg gtgtgaatgg cttaaacgca cagggggaat tcaatacagt gcggccttat
    10921 agttatgctt ccgacactac tactactgtg tatgcacacg acaaccaacc attagctcac
    10981 ccgatcggcg cgaactttaa agaggtgatt ggcgttgcgg attattccta caaaaggtgg
    11041 tggttaaggg ctgaggcatt tatcacacat tatggcgctg attcgtcggc gaacgtcgat
    11101 tacggacgcg atattttcaa gccgctttac ttacacagca aggaaaccga tatcaaaacg
    11161 gaccagggcc tgaataccca gatctattac gccgatttta gggttgctta cattttaaat
    11221 aagaaaaata atttgcgcgt tgaggcgggg gcggtttaca ggagtgagag taataaactt
    11281 tatgattaca aggatttcta tggttatatc ggtgtgcgat tttctttccg caaactgatt
    11341 tacgattttt aaatgaagca ttgaaaagga taaagaacat aagaacaatt tttctggtta
    11401 ccggcatcat gctctgcacg caagtttttg ctcagcagat cccgctcaat cagttggtac
    11461 agaacaggct caatgaatta atgtttgagg ctgattcgtc cgtgttttcg agtttccgtt
    11521 caatgaactg gctcgagttg aagcaactga acattattca caaatcgagc cttacagaca
    11581 gcgtgttcgg actgacgaca gcttcaaaaa gtaatttggg taacacgaac tgggtgcttg
    11641 cttcaggaaa gaacagcaca ttcacgatcg acccgtactt aaatctcggt tttggcaaat
    11701 cgagtgaaaa agacaatgcc ctcacgaatt tttccggcgg gatcaggatg cagggcgcat
    11761 tcaacgataa gttctctttc aatcttgatg tgatcacaaa tgttcaacag ttcccgtctt
    11821 atctcgacag ttttattttt tcaaagtatg accgttttga cacggtgtct actaaatata
    11881 taattcccgg tgagaatgcg gcaacactaa aaaatgacaa ccgttttgct tacacaaatt
    11941 ttgggttcaa tcttacgtat acaccgaata aacatttttt gatcgcgacg ggatatggca
    12001 agcaattttt gggagatggc tacaggagtt tgctgctgtc agacaatagt aataattatc
    12061 cttatgtccg cttgcaggcg cgcatctgga aactctcgta taatgtgttg tataatcggt
    12121 acactaataa atcgtggtat aatgttgatg gtgatcctca gcccaaatac agtacagtgc
    12181 actatttggg tttcaacgct aaaaaatttc agctcggttt gtttgatgaa ataacgtggc
    12241 tggcaaaaga tacaaatttt acccgcggtt tcgatttgca atatataaac ccgctcattt
    12301 tcatgcggcc gctggagttt gcaattggct caccggataa tgcaatgatc ggattgaatg
    12361 cgaagtataa attatataaa aacggttata tctatgggca ggtggcgctt gatgatctta
    12421 acctccatct cagcgcggat agtaacagcc aattctacgg caataagtac gctttgcaat
    12481 taggaatttg gaataaagac atctttagtg tgaaaggcct cacttatcgc ttcgagtgga
    12541 acagcgttcg gccatataca tacggacatg gtgtaggcgg caacatcagc ctgaattata
    12601 cgcattactt ccagtcgctg acagatccat tcggtgccaa ctttaatgaa atcatctcct
    12661 tattcaacta ttccaaccgc cgctggtatg ccatacttga gaacctgtac accgttcgcg
    12721 gtgaaaatcc gggcgttaat tataataccg gcgaagacct gtggggtgga gagctgaatg
    12781 ttgtaagatt cggtgtaaaa actatgcagg gcaccaaaac aaaatattcg tttaaccaat
    12841 taaccgccgg ttatcttctg aatcctgcaa atcgactgag tgtcgaggca aatgtcgctt
    12901 accgcagccg tacatcttct atggtaaacc aaaaagagtg gtattttggg atcggtatta
    12961 aaacaaacat ctataatttc tatcacgatt tttgatagat aattaagttc atcatttcac
    13021 gcatttaagt cgtatgcgtt tcagcttctc ttataataaa ggaaaagttc tgcaggcttt
    13081 aaggtatcat tttatcgctc agtccgaaat acgcatactc ttcatagtaa taatactctt
    13141 cgacatcatt tctgcagtgt tttatttttc cggaaagatc aggccggagc cttttttgct
    13201 cgggtctgtt atctggtttg tgtttatact atcattctgg tttttcatgc catacgctgt
    13261 gtacaagaag tcgtccactt tcagggaagc tttcacgatc tcttttcagc catcttatgt
    13321 ttcattagaa aatccaaatg gaagagtgga gtgggagtgg acgaggttca tgaaatattt
    13381 tgaaactccg aacttttttc acctgtattt ttcggccaaa gcgtttttcc ttgtcccgaa
    13441 agacgggctt acgagtgaca cgcaacatga actgcgggtt ttgttgaaca gtcgtatcca
    13501 gttgccgcta aagaaatagc tatagctcct tctccataac gtaatggggt atggtcacct
    13561 ctttaaattc gtccccgctt tttttgtatc cgagtttttc ataaaacccg atcgccgttt
    13621 tccgggcatg catgatgatc tttttgtaac cgcggtctcg tgctatattt tctgcgaact
    13681 gtgtaagtac cttgccaatg ccttttccct gtaaacctga aacaactgcc atttggcgta
    13741 aacgcaaagt cctggcatca agttttgtaa gtaaacagca gccttccagt ttgtcgtctt
    13801 caaaacaacc gataagtatg tcgtccttct ctttgtcgag ctcttcctgc tcgaacgaca
    13861 atcccaaagg ttttcgtaag agcagcaggc gcaaattcac catttgcctg taatctccgc
    13921 tgccatgatc aattagtttt acagccatag ggggtcttta aaaaatttgc aagcgcaggt
    13981 aaattactaa aaatatggaa acattttgca cacgaaattt tttgaaaaac aagttgcttt
    14041 tttaagtttc aagaccagtg aaacaaaaat tatggaaaat atttgttttt aagtaaaaat
    14101 tatatttttg ccgagtaaca aaactttaca aaatgtcaga catagctaca agagttaaga
    14161 aaattattgt tgacaaatta ggtgttgagg aggctgaggt gaccaatgaa gcatcattta
    14221 ctaatgacct tggcgctgat tcgcttgata ctgtcgagct gatcatggaa tttgaaaagg
    14281 aattcaatat ttctatcccg gatgagcagg cagaaaccat cactactgta gggcaagctg
    14341 ttacatacct ggaagaacac gcaaaataat tcttagccca taaaatattt aggatccgcc
    14401 gcaggtaaac tctgacggcg gattttcaca taacaacttc tctatgcaat atgacagagt
    14461 ggttataaca gggatggggg caattacgcc actcggaaac acagttgctg actactggaa
    14521 aaatcttgtt gcgggtgtct ctggtgccga cactatcacg aaatttgatc cttctaaatt
    14581 caaaacaaag tttgcctgtg aaataaaagg gtttgatccg acacaataca tcgacaaaaa
    14641 agaagtgcgc cgaatggatc cctatgcgca actcgcgctg gccgtatccg atgaagcgat
    14701 gtctgacgct ggtttggtaa ataacaatta cgatcctgat aggataggtg ttatcctcgg
    14761 aagtggcatt ggaggatttc ttagcttcca ggaagaatgc atttcttatg gcatcgctaa
    14821 ccgcacgcca aggttctcac cgttttttat accaaagatc atctgcgaca tgggtgccgg
    14881 gctcgtgtca atgcgccata atttgcgcgg cccgaacttc gccgttgtaa gtgcctgcgc
    14941 cacgagcaat aatgctatca tggaagcttt atttcatctg cggctgaaca aagcagacat
    15001 catggtgtgc ggcggcacgg aaatgagtgt ttgcgaaggg ggcgttgcgg gttttaatgc
    15061 gatgaaggct ttaagtgaac gcaatgacga tccaaagatc gcaagccgtc cttacgataa
    15121 agaccgcgat ggttttgtaa ttggggaagc ttgtggaatt ctcatcctgg aacgactcga
    15181 tcatgcttta gaaagaggtg cacgtattta ttgcgagctt gccggcgcgg gcgcctcggc
    15241 cgatgcttat catttaactg cgccgcatcc ggaaggtaag ggagcgataa gagctatgct
    15301 cgccacgttc gaggacgcag ggatgcagca aactgatgta gactatatca acacacatgg
    15361 cacgtctact ccgcttggag acatcgctga agtaattgcg ataaaacagg tattcggcga
    15421 tcacatatat gacgtgaata tcagttctac aaaatcaatg accggccact gtcttggcgc
    15481 agcgggagcc attgaagcga ttgcgagcat taaagcaata accgacggca ctattccacc
    15541 aaccataaat cattttacgg atgatcccga acttgatccg ggcctcaact tcacgttcaa
    15601 tgttgcccag catcgcaaag taagagcggc gctcagtaac aactttggtt ttggtggtca
    15661 taatgcttca ctccttttta aagaatatat cccataaaaa ttgttcagca aactactcaa
    15721 atccaaacaa actctccatt ttgaaaaaca acttcaaaac gtattgggaa taaaaccagg
    15781 taactattcc ctttactaca ctgcccttag tcaccgttcg attaaagaag gcgccgatga
    15841 aaataatgaa cgattggaat acctgggaga tgccgtgctc agcaccatcg ttgccgacta
    15901 tctttttaag cgttatcctt ataaaggcga aggatttctt acggaaatga gaagcaagat
    15961 ggtgaaccgg caacagctga atgagatcgc cctgaagatg ggattaaaaa agcttaccat
    16021 ctacaacaag ttcgacagtt ttcttaaagg cagccagatc tttggtaaca cactcgaagc
    16081 gatagtaggc gccatctatc ttgataaagg ttataccaaa acgcggaaat gggtgctgaa
    16141 gcaattgatc ctttcatatt tgtttgtaga tgaccttgag caaattgata tcaacttaaa
    16201 gaatcggttg ataggatggg caagcaaaaa tggaaagcaa ctggaatttg aaacgctgaa
    16261 tgaaaagatg gaaggaagcc gcaggatatt cacaatagct gttgttttgg atggagtaat
    16321 cctttccgag gcgcgcggct tcaacaagaa agacgccagc caggtagcag ctcaaatcgc
    16381 gatcgaaaaa ttaggcttgt gacaaataaa aggctgccca ctgtagaaca gcctttacct
    16441 gaattttttt ctacatctca gtcaaaatgt ttttcttctt aatgtctttt actaccgatt
    16501 ttgaataatc gttcgccagg gcagaaatgc tcgacggatc ataggattgt gtttccacag
    16561 aataaatgag ctttttatcg gccacgctat acaggtttgt ttcgaaattg taattcacgt
    16621 ttgtttcgaa atgaccggac ttgtagtagg gcatataata cggcttgtaa acccatcctc
    16681 ctaaaaacgg attataccgg taaccggcac ccccgtaacg cggacctgga acgaattgcc
    16741 gttctttgtt tttatcaaca agattgatgg taataactgc gtcaatattg ttgccgttta
    16801 tttttttaag gacctctttt tctggcagat cctggaaata ctttggtcca tataggttgt
    16861 aagcagttac agcattaatt ccgtttgctt ttaattcatc agccaattgt ttttccattt
    16921 cagcccgcac cactttatcc tggctgtcaa ataaacccac gacaaggatc ttatttatgc
    16981 gattgcggga attttccggc tctttccaac tgctggtcac tttactgcta ctgcatccgg
    17041 ccagtatcaa cattgcagca gaaatcaaaa gcatcattct ccttttcata atctttcatt
    17101 tacttttttg aatagacaaa caaggaaatg cgacgcttat tcagcggtga aaagttaacg
    17161 tttcgaaaac tgctattgaa cggactggca caactcgata agcacgccgt gcgtattctt
    17221 tggatggagg aaacaaataa gtttattatc ggcgccgcgc ctgggtttat ttatgacgat
    17281 gaacccctcg ctttcgaggc gctgaatttc tgcattcata tcatcaacct caaaagcgat
    17341 atgatggatc ccttcccctc ttttgtcaat aaattttgcg atcggtccgg tttcactgtc
    17401 attttcaagc aactcaatct tcgtctcgcc ggttttcaaa aaggccgtcg ttacattttc
    17461 agcgtccacc acttcggttt tgtaacattt tgtattcagt agtttttcga aaaccggaag
    17521 cgccgcagcc aggcttttca cagctatccc gatatggtct atatgtttca ttgtgtaaat
    17581 taaaaatgaa atttactata cgtttcggac gcttttaaat atttgccgga tgatacttaa
    17641 atttgcagta tctggaacaa ttcgctttca gctaaagtcc gaattaatat gaatgaggtt
    17701 accgaggaga atatcaccgc atcagagaga gcgcagatca agatcgccga attaatgaag
    17761 caggcaggtg ttgccgaaga tccatcatac ttcctccgcg tttcagtagt gggtggcgga
    17821 tgttcagggc tcagttataa acttgatttc gacaatgagc taaaacctgc agaccaggtt
    17881 tttgaagcgg gcgatgttaa gcttgtaacc gatctcaaaa gtctgctcta tttgatcaat
    17941 acagaacttg atttttccga tggcctaaac ggtaagggct tttactttaa aaatccgaac
    18001 gcatcacgca cgtgcggctg cggcgaaagt ttcgctgttt agaactgctt ttccacaaaa
    18061 ttttctctga aaatactttt ttaaatcgtg caacttttaa aaggggctga ctgtcttgtt
    18121 atgcacagag atgttaaaaa gttttttaac aaaaggtgta atacttacac atactctgct
    18181 atatttacgg attcaaatgc ttttttaatt aaaaaactgc ttgtattatg actgcaaatc
    18241 gattgctgaa agcactcatt ttgtgtcctg cgctgctgct cgcggccttt gtttcccagg
    18301 cgcagacaaa aacaatcacg ggaaaagttt tagatgaaaa aggaaacgct gtaacaggag
    18361 cgtcgattgt cgttaagggg ggcaagtcgg gaactaccag tgatgccaca ggatctttta
    18421 aattggcagt acccaccacc gctaccgcga tcaccgtctc gtatgttggt tacgtgccac
    18481 gtgacgtgga tgtgtctacc actacagatg ttagcgtaag tttaagtccc gacaatacca
    18541 gtctgacaga cgttgttgtg attggatatg ggaccgcgaa gcgcaaagat ctcagtggat
    18601 cttattcaac ggtaacagcc aagaatttta ataaaatacc agctaccacc cctgatcagt
    18661 tattgcaggg taaagtgccg ggtttacagg taaccgtcgc aagcggagcg cccggatctg
    18721 taagtcaggt taggatcagg ggtaataatt caattcgcgc cggaacggag cctttgtatg
    18781 ttgtggacgg agttccattg gatggaaggt ctgccaggcc cggtttttca agcatcagtg
    18841 gtttaggtgc tataccagag tcgaacccct taagttattt aaatcctaac gatatagaaa
    18901 acatttctgt attgaaggat gcttccgctt cggcgattta tgggtcgaga ggtgcgaatg
    18961 gcgttatcca gatcaccaca aaatcgggta caagcggtcc ttcaagattt gacatcaaca
    19021 catcgtgggg cattgccggt ctaatgacgc aaccagatgt tttggatgta ggccaatata
    19081 gagaagcact gtccaaatat ggcgcccatt ctgattcggg tgcttcaatc aatccgtttg
    19141 atgcgattat caggcacaaa ctctctcaaa attattcaat agcattcaat ggcggcggta
    19201 ctgaacgtag ccgcttcaga gcctcatttt ttgcctcttc tcttccaggc atcattgata
    19261 agactcagct cgacaaatac attggcaaca tcaatggtag ttacaagttc attgacgaca
    19321 agcttacttt gaaatttggc ttgaccgctg ctaatacgaa agaacaaatt gcgcccattt
    19381 caaatgaccc gggaagtaca ggtaaccttg tatcactatc catgcaatgg aaccctacac
    19441 tgctattgca gcggggtgaa acacaatata ccgtgaatcc aaatggccag gtgaatccag
    19501 ccttgttgtc taaagcatat aatgactacg cagttgtcac cactttgttg ggcaatatat
    19561 cagccggtta caagttgctt ccggaactgg aatatcagtt tttctacggt gtgaattata
    19621 gcaccggaac aagaggacag gagctacagg gttacataac cggtacaggc ggtaatgctg
    19681 acggtaaggg attggcaaat acgggaagcg ccgaactgtt ctcccagaca ataactcaca
    19741 cgctaacgta ctccaagcgc atcaatgatc ttagtgtaac tgctttagcc ggatatgaat
    19801 attattcgac gaagtacaaa tcacaatcca caagtgttta tcagtttgac tataatttga
    19861 gtttgagtaa cctggtgccg attcattatt atgataacat gcaggacggc aaacagtcaa
    19921 atttaaccac gtcatcaagc aatgatccta caacagaatt gcagtcatat ttcggccgcg
    19981 tgatcttaag ttatagaaat aaatatacag tttcagcgtc catacgtgca gacggttcga
    20041 cgaaatttgg tgaaaacaac cggtacgcct atttcccggc agtttccgga aaatggcaaa
    20101 tcagcgaaga gaattttatg agtggtggtc atgtgtttag taacctggcc ttaagagtag
    20161 gatggggtaa gacgggtaat cagtcgttcc cgtcaggagc atcccaggac cgctacaagt
    20221 acaattcaaa cggaagttta ggtgtagtaa actttgctaa tccggatttg aaatgggaaa
    20281 ctgtgacttc tacgaatgga gggattgatt tcggattcat gaacaacagg ctcactggta
    20341 cgattgatat cttctttaag aagacaaccg atccattgtt ccctggtaca cttgctgccc
    20401 cagcccctgc tggtgtgctt tggcaaaatt taccaggata tgtgagcaat aaaggaggcg
    20461 aaataggagt taactggcag atcattcaaa acaaagactt cgcctggtca gtgaatccta
    20521 ctgcaaccta tgttaaaaac aagttcgttt ttcctgaagc aggagaagga ccgctggtgt
    20581 tgaccggtaa cctgaatggt aaaggtactt cagcaacatg ggtacaggca attgcagatg
    20641 atcagccgat caatgtgttt tatttgcgtc agttccatgg atttgacaaa gacggattcg
    20701 ctatcacgga caacttcgcc tcttacgccg gagatccaaa tccgaaatgg gtagtcggta
    20761 ttacaaccga agtcgattat aaaaacttgt ctttaactgt caatatgcat ggcgcttatg
    20821 atttcttcat ctataataac actatacaat cagtaacggg ccttagcttt ataacgaatg
    20881 gtagtaacat ttcaaaaacg ctgataggct caccggaaaa catcgcaaac cccgtttcgg
    20941 cttcaacgcg atttatgttg agcggcaact atatgaaatt aggtaacgcg acagttaact
    21001 ataaagtagg cgatctcggt aaggtcgtaa agaatttgaa cgtatatgtt accggagtta
    21061 acttgttcac tttgacaaaa taccctggct ttgatccgga agtaaacgtt tccaaaagcg
    21121 atataaatgg taccggaatt ccatctattg gcatagatta cgttggttac ccaacgccgc
    21181 gtacttttat ctttggactt agtttaagct taggtaacta aaaaaatgta attaaaaaga
    21241 ataaattttt tgtacaatga atattaataa taaatttcta acgattgtaa cagccttagt
    21301 catcgcttct ggttgtacaa agttgaatga agattttaat gattcgatca acaacccggg
    21361 cagcggtggc aatacagacg ttaccgcgct tttgaataac gcgtataacg atatgaatac
    21421 gccgttcaac aaccaggatc aaattttctc gttggaagaa aatgtaacgg atgaatgtct
    21481 cgtgcccacg cgtggtggtg actgggatga caatggcgta tggcgtgttt tacatgcgca
    21541 ctcatgggat gttacgcatc agcaggctca atctgtgttc atcaatctcg gcaaactgga
    21601 gagtgatgca acaacggttc ttgcgtttaa gccttcacag gaacaagccg ctgaagcgtt
    21661 gttcttgaga tcgttggctc agttttatct tctcgatctg tatgcccagg ttccttacag
    21721 aaccgttgaa aaatataatt caatagatgc tgcacctgtt ctggaacctg cagcggccat
    21781 tgataccctt gtcgcgaact tgacgcaaat cattcctcag ttaagcgacg ccaatcaacc
    21841 atataaagcc agcccaaatg ctgcgcggtt cttattgatg aaagttttgt tgaacaaaca
    21901 ggcgtttcta aacagggaaa gtccgggtac tgctgacaat ggcgatatga cacaaattat
    21961 caatttgggt aacgatatca ttaacagtgg aacgtccaat agtgcaacag gcgctcctct
    22021 tcaattcaca ccgcattatt ttgacaattt cggacccaat aatggtggcg cggatccagc
    22081 gtatggcttt ggtgtaggcg ctgaaatgat ctttgcattt ccaaaccttc ccggtgtttc
    22141 aaacaataac ggcagaaata gtgtaggagt aaatgcaaga tggatgatga cgttgcacta
    22201 taactcatat ggccatccag gcgatggcgt ttacggcggc gctggatgga atggtttcag
    22261 tacaattgct gacttctaca acgctttcga cgcttccgat accatgcgca gaggaaatgt
    22321 gccgtatccc ggtgttacca atacatccgg attgaaagtt ggactgttgg agggacaaca
    22381 atacgatgaa aacgggcaaa ttcgtgtaga cagaaatggt aacccgcttc agtttaatcc
    22441 ggaggttcat ttagttgagc ctgatccttt gacccttgaa gataatggta taagaatcat
    22501 caaatacgca cccgattatc agaactatac cggtgggcag caaggcaatc agctgcagtt
    22561 gttcaggttg gcagatgttt atttgatgat ggcagaagcc tatttgaacc agggagatgc
    22621 tgcatcagct ttggccaaag taaacgaagt gagagcggca agaaaggctg caccattagc
    22681 ttcgctgtca ttagtaaatg caggtaattt gtacgatgag aataccttgc tcgctgaaag
    22741 acaaaaagaa ttgtactggg aaagctggcg ccgccaggat ttgatccgta tgggcgttta
    22801 cctgcaacca tgggcgctaa aagaagcaga tgatgcaaaa tatttattgt tcccgatccc
    22861 gtcaacacag ttgatcgtaa acccgaacct tacgcagaat ccaggatact aagaattaat
    22921 ttgttaagtt ttaaaaaaag gtcatttcaa ttgaatgacc tttttttctt ttgttatatg
    22981 aaatttattt tgcccctgcc ttttctttct tcactggtct ttcttttttc ctgcaggtca
    23041 gattccaaac aactgctgtt cacacttgaa caaaacaccg gtatcgactt taataataaa
    23101 gtggttgacg gaaatattga gaatagcttt ctttttagga atttttacaa tggtggtggt
    23161 gttgcggttg gcgacctgaa caacgatggt ttgcccgacg tgtttctcac atctaatatg
    23221 ggagacaata aactttatct gaataaaggc aattttaaat tcgaagatat tactgcaaac
    23281 agcgggatca aacaagacag tatgtggagt acaggcgttg agtttgttga cataaaccac
    23341 gatggctggc tcgacatata tgtctgcaat tccgggcaca tgaaaaacgg gaatcgcagg
    23401 aacaaactct acatcaataa caaaaacctg acactcactg aagagtctgc caaatatggg
    23461 ctcgatattt cagcatacac aacccaggtt agttttttcg attatgatct cgacggcgac
    23521 cttgattgct ttatgatcaa taacagtcca atgcctgtga ataatctcgg ttacgataac
    23581 cgaagaagtt tgccgcagga acaatggcag gttgccagtt tcttaaaagg tggcggcgat
    23641 catttgtata gaaatgacaa tggtcatttt cgggaagtaa cgcaggaggc aggtatccat
    23701 gggagcctta tcagttttgg tttaggagta tctgtaggag atatcaatgg cgatggcttt
    23761 gctgatattt acgttgcaaa tgattcttac gaaagggatt atctctacat taatcagaag
    23821 aatggcacat ttaaagatga gtttgaaact tgtattgcgc atacaagttt ttcttcaatg
    23881 ggagcggata ttgcggacat aaataatgat ggttacccgg aaatcttcac cacagacatg
    23941 ttgcccggcg atgactttcg attaaaaacg ttgggtgctt ttgataatat tgatgtattc
    24001 agaaaaaaag taaaccaggg gttgtactac cagtacatga aaaattgtct ccagctaaac
    24061 aatggggacg gaacattttc agagatcgca aattactcag gtgtttctgc gacagactgg
    24121 agttggggcg cactcatgtt cgacgcagac aatgatggat taaatgacat ttatgtctgc
    24181 aacggtgtaa acagggatgt gacgaatctt gatttcatgg atttttttgc gaacgaggtg
    24241 attcaaaaga tgattttgac cggcaaaaaa gataacgtgg acgaggtgct taaacaaata
    24301 cctgtaaacc cgatgataaa taaatgtttt aaaaatgaag gcaatttaaa atttaaggac
    24361 gtgggccttg attggggatt taccaagcct tctttttcaa acggcgcggc gtacgcggac
    24421 ctcgacaacg atggtgatct tgacctggtg atcaataatg aaaatcaacc ggcctttata
    24481 tataaaaata attcgaggga aataaatcat aatcactcta taagctttct tttaaagggg
    24541 gatagcctca atacttttgc cgttggcagt acaattaaaa tatatgccgg caaacatatc
    24601 ttttcccgtg aattaattcc ggcgagaggc tttcagtcgt cagtagatta taaacaattg
    24661 attggcctgg gtaacataag taaaattgac tcagccgttg tgatttggcc cgatcacagc
    24721 tttaataaat atacgagtct caagatcgat agtttttata cgatccataa agccgcgaat
    24781 agaaattttt atcctttcgc aggtgttcaa acaatgaagc ctttattcga ttcggtcaag
    24841 aataattttg acaaacacga agaagatgat tatgtggatt tttattacga gcggaacatt
    24901 ccggaaatgc tttcccgtga agggcccagg gctgcagtag gagacgttaa tggggaccac
    24961 ctggatgacg tgtatatagg gggaacaaaa gatcatgtag ggtgcctgta catacagcag
    25021 gcagatggtt ccttcacaaa aaaagtggaa cccgcttttg ctcccttttt agatttcgaa
    25081 gacgaggcag tattgttttt tgatgcagat aaagatggcg atctcgacct ctttgttggc
    25141 cccggtggga atgacaatcc tccttatagc cgcgaaatgc aaaaccgctt ttttaaaaat
    25201 gacggcaaag gaaattttgc attggacgca gacgcttttc cgtcaaacgg tatgaacact
    25261 ggtgcagtgg ctgcctatga ttttaatcat gacggttata cagacctgtt tgtggggggc
    25321 agaagtgatc cacgaaatta tggaggagat cctgcgagtt atatgtatct caatgatggc
    25381 tacggacact ttaaagatat cgctaaaaca aaaaatcctg atctggcaaa gatcgggatg
    25441 gttaccggcg ccgtttgggc ggatgttaaa ggagactcga gcaaagaact tattattagc
    25501 ggcgaatgga tgtcgccaaa aatattttct tacaacggcg atcattttgt tgaagtgcaa
    25561 acaaatatta agaatttgaa cgggctgtgg aagacggttg tggcaacaga tgtaaataat
    25621 gacgggaaaa cagatttaat atttggtaac ataggtgaga atttttacct gcagcctgac
    25681 gaaaagaagc ctgtaaagtt atggttgaat gatttcaacc aaaacggtaa ctacgataaa
    25741 gtgctcaccc gaaccgttga tggacaagat atgcccgttt ttttaaagca tgatatgcag
    25801 gatgaaattc catcgatcaa gaaacaaaac ctgcaacatt atgattatgc gaaaaaatca
    25861 atacagcagt tattttccgc ggaattgctt aagggagctg ttgtgaaaac gtttaactat
    25921 tgcagttcag tggttgctct aaatgagggc gatggcaaat tccggataca aaaattgcct
    25981 gtatctgctc agttgtcaaa cgtaaattcc atttgtgtta ccgatataaa ccaggacgga
    26041 tttcctgacc tggtgattgg cggtaatgaa gagaattttc ctccgcagtt cgggcggctc
    26101 gatgcaggtt tcggggatgt gctgatcaat aacggcaaag gcaattttat cagtgttgat
    26161 tcaaaacaat ccggaataaa agtgcccggg atgataaaag atgtttgtgc cgtgcatgga
    26221 agcaacgaaa catacctgct ttttttgcgc aacaacaatt ttccaatgct ataccgggcg
    26281 cataattttt tccaaaaaaa tttaaaccag taattcttgt cctgtagttt catacgaaaa
    26341 aaaatttgcg atcaatctta tttatgcccg gtttttttga ttctgctagt gatgaactgg
    26401 agctgtaaca ctccggcaaa atcaccggtc gccttcagct tattgacatc aaaagaaaca
    26461 gggcttgatt tcacaaataa actcacacct tccaattcct ttaatgtatt tcactacatg
    26521 tatttttata atggcgctgg tgtagcggcg ggtgatatga ataacgatgg tttgatcgat
    26581 ctgttcttcg cctctaatca gggacagaat aaaatttaca tcaacacagg gaaaatgcat
    26641 tttaaagatg cgacccgaga agcccatatt ccaaatgata gcgggtggaa tacaggagtt
    26701 tcccttgtgg atatcaataa tgatggattg ctggacatct atatttgtcg tgttggaaaa
    26761 tacgagatat taaatagcca caacgagttc cttgtctgta aaggcattga ccggaacggt
    26821 gtgccctatt atcaagatga agcgaaacag tacggtctcg atttctcagg tttcagcaca
    26881 caagctgctt tttttgatta tgacggcgac ggggatatgg atatgtatct attgaaccat
    26941 tccattcatc agaacggaac attcggcgcc cgaaagatta tgatcaatac aaagagtccc
    27001 gtgtccggtg atcacttgta ccgaaatgat gatggacgct ttacagacgt tacaaaacaa
    27061 gctgggatca acagttccat tttaggttat ggacttggaa tttgcattgc tgatatcaat
    27121 atggatggat ggcctgatgt atatattggc aacgactttc acgagaaaga ctacctgtac
    27181 atcaataatc atgatgccac attcaaagaa gaagactcaa cctgtttcat gcacacaagt
    27241 caatatacga tgggcgttga tgtcggcgat ataaataatg atgcattgcc tgaaatcgtg
    27301 agcatggata tgttaccttc tgatccatac atcttaaaac gttctgaggg cgaagatgaa
    27361 aatgatattt tcaatttaaa gatcaaatat ggttacagct accagtatac aagaaataac
    27421 ctgcagtata atcgtggcaa tggagtgttc agcgacgtgg gattatatgc aaacgttgcc
    27481 gcaactgatt ggtcatggtc tccattatgg atcgactttg acaatgacgg tttgaaagac
    27541 ctgtttgtgt cgaatggtat cccgaaacgg ttaaatgata tcgactacat caactatgta
    27601 tcaaatgacc aggtgcaaat ggatataagg ctgaataacc tgaattcaaa agacatgtcg
    27661 ctcatcagca aatttcctga aataaaaatc ccggataagt ttttcaggaa cgatggctct
    27721 cttcaattca cggacctggc cgcatcaata aaaaatgatc aaccaacatt ttcgaacggt
    27781 gcagcgtatg cggattttga taatgacggc gacatggata ttgcgataaa taacattgat
    27841 agcgatgcaa tgatctacga gaataaaagc aacgatggta gaaaggatta tattgaattg
    27901 aaattaaagg gtacccctaa aaatgtaaat gcggttggct ctaaagttat tgtcttcgcg
    27961 aagaatgatg tgagaacata cgagaagttt cctgtgcgcg gctttatgtc aagctcagaa
    28021 attccagtgc atattggttt aaataaagtg actgttgatt cagttgtcct tatctggcct
    28081 gacaactcat accaaacaat cgattggcgc gcggatacgg gaaagatcaa aacaataaat
    28141 tatacaccgg gtttatcgca gttcaattat gccgagcttg cacggtgtag caccaatcaa
    28201 actttgcctg ttgaaaatat tacgcatgac gtcggtttga attacgtgca cacagagaat
    28261 caatttcctg aattcgaccg cgagccgctg atcccgcaca tgacgtcaac agaaggcccc
    28321 gcacttgctg ttgccgatat taatcatgat gggcttgacg acgtttttat cggtgctgct
    28381 aaaagaataa aacctgcgtt cttcatgcaa caaccttcag gaaaatttca aaagataaat
    28441 gagcctgcat tggataaaga tagtggctat gaagatgtga gcgcctgttg gacagatgta
    28501 aacaatgata acaatcctga cctggtggtt gccagcggcg gcaatgaatt ttatggaaca
    28561 gattcaaacc ttttgccgcg tatttacctg aatgacggaa acggtgatct tgttcgaaag
    28621 tatgatgcct ttacaaatat ttataccgca cagtcctgcg tagtacccta tgattttaat
    28681 gcggatgggc gtgtagatct ttttatcggt ggaagagtag ttccatttca ttatggcgaa
    28741 acacctcagt cttatttatt actgaacgat ggctctggga aatttaaaga tgtaacaaat
    28801 caatacgcga aagggctgtc aagtgtggga atggttacaa acgccatatg gtatgattta
    28861 gacaaagatg gggatgacga tcttgtgctc tccctggaat gggatggtat aattgctttc
    28921 atgaacgacc atggccactt caccaaaaag tacttaactg ataaaaaagg atggtggaat
    28981 tttgttatgg catgtgatct ggacaatgat ggtgatgttg acttaattgc aggtaacctc
    29041 ggtttgaaca gtcgattgaa agcaagcgat gcacagcctg ttcggcttta tataaacgac
    29101 tttgacgaca acggaaataa ggaacaagtg ctcacgtatt accttgataa caaagagatc
    29161 cccttcgcta ataaggatga attgcaaaaa caaatgcctg gcttaaaaaa gaaatatttg
    29221 tatgcaggcg attttgcaaa ggcatcgttg actgatcttt tttctgagag taaactgaaa
    29281 tcttcaacaa tgctgtcggc aaactggttt tacaatacaa tttttattaa cgacggaaaa
    29341 atgaatttta aacccatccc aatgcctgta aacgcacaac tttcacccta ccgaacgggc
    29401 accgttgttg atgctaatca tgataagctt cctgacgttt tattaggcgg gaattactac
    29461 gatagtaata ttcagatggg caggtacgat gcagattacg gcacgatcct tttaaacgaa
    29521 ggcaatgacc ggtttttggc tacaacctta aacggcttaa cggtgaaagg gcaggtacgt
    29581 tgtataaagc cgattcaact taaaaacaac cgggcggcat ttgtgttcgc caggaatgat
    29641 gacagcacgc tagtt
//
LOCUS       DASQJI010000003        21264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_361, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000003 DASQJI010000000
VERSION     DASQJI010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21264
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /gene="prmC"
                     /locus_tag="VEV83_00135"
     CDS             <1..910
                     /gene="prmC"
                     /locus_tag="VEV83_00135"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HYK43542.1"
                     /translation="GACINQKYLNHFYIAAVTIQQAYQQLSSQLSAIYDAREAANIAD
                     LVIEHISSEKKIDRLLNRNKALDTDQQQLLANYTEKLLQHQPVQYVLHAAWFAGLKLY
                     VDENVLIPRPETEELVEWIVSDLTIHNSQFTILDIGTGSGCIAIALKKKLPSSQLSAL
                     DISEAALKIAQRNAIDNNSQINFFYADILHEEYIENLPRFDMIVSNPPYVKRNEAEEM
                     RTNVFLYEPHVALFVPEEDALLFYRHIARFAIHHLKENGCLYVELNQLLADEVADLFR
                     GSGFRSVEIKKDMQGKDRMIKATRSE"
     gene            969..1277
                     /locus_tag="VEV83_00140"
     CDS             969..1277
                     /locus_tag="VEV83_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HYK43543.1"
                     /translation="MMMGADTAAETWQEVDTDVLTTTFHSYNLIVWNDEVNTFDWVIE
                     TLVEVCGHTPEQAEQCAFIIHFHGKYAVKQGDYDTLKPMREAITDRGINATIEEVVAS
                     "
     gene            1296..1940
                     /gene="aat"
                     /locus_tag="VEV83_00145"
     CDS             1296..1940
                     /gene="aat"
                     /locus_tag="VEV83_00145"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HYK43544.1"
                     /translation="MALYILDNNVWFPPADETTEEGLLAIGGDLSEERLLLAYKNGIF
                     PWFEDDYPLWWCPDPRFVLFPQELKISKSMQQVLRKAEFDFRTNTDFVQVIHQCKTIK
                     REGQHGTWITEAIEEAYTDLFKKGYAHTAETWKGDTLVGGLYGIRLGKIFFGESMFSL
                     FANASKFAFIKYVQLLQQEGVQLIDCQVYTEHLETLGARMIPRKDFLDILKIYV"
     gene            2118..3839
                     /locus_tag="VEV83_00150"
     CDS             2118..3839
                     /locus_tag="VEV83_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43545.1"
                     /translation="MHFIKKSSSNSIDADGLLALKSEEAFLPYEGKTIRYIIVNQYRF
                     EKTFIDTTKSINYFGTKILNRLHKDTRQWAIRDDLFIHENTPLAVYQLADNERYLRSL
                     DYIQDARIIVKPITGTQDSVDVYVITKDFFSLNGQLNNASPGKFKAKVGDVNLFGAAQ
                     NLQGAILIEKDRSPAIGTGIMYTKYNVAGTFIDATVGYTTINRDLHDGTMDEHAGYVT
                     LQRILVSQYSHFAGGLTVGKYQSFNNYSKPEDYFFNYSYHVFDSWLGYNLGPDKLIKD
                     RTRKANQFISLRYFNTFFSQTPVQVQDKLNFRFNNKEAVLAQFTFFKQGYYKTNYIYG
                     FGTTEDIPYGYNMAFTLGMYQQAYLSRPYAGLDANRYKVYNRGDIVQYFLRAGSFWDR
                     GKWQDANILLGVSGFSRLFLFNNFKLRQYMRLSYTRQFNRIGLDPLGINNAFGLRYFS
                     SDSITGNQRFSLHSETITFINYKVLGFKFSPFAFADVVALNLYNETFNKSVWYYGLGG
                     GIRTRNENLVFRTSELRIVYFPRKGNQTQSFKATLAINFRFRYNTNYVLEPDIIQLNS
                     DSQNNIF"
     gene            4114..5958
                     /locus_tag="VEV83_00155"
     CDS             4114..5958
                     /locus_tag="VEV83_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43546.1"
                     /translation="MRYIVKTLTVICILLIYAFHPVLAQPGDSTRTAPKNNIFHYAMH
                     FLKRSRTDSVVGEDLLTTKSEQAFLPYQGKIIRNIIINQYHFEKTFSDTAKSINYFGT
                     RVLNHLHRDTRYWAIRDNLFLKENTPLVAYRCADNERYLRSLEYIQDARIVVKPILGS
                     QDSVDVYVITKDLFSMTGQLNNVSTGKFKAQAGDVNLMGGAQNLQGTIMVQKNRDPAF
                     GFGLRYTKYNVLHSFTDFTVAYSTINPNLYDGSNDERAMYVNLQRDLISQYSHLAGGL
                     TIGRNQSMNSYSKPENIYFNYSYNLFDAWIGYNLGVEKFIKDPGRRDKQFISLRYYNN
                     YFTQTPEQVANKLDFRFNSREAVLAQFTFFKQEYYKANFIYGFGTTEDIPYGYNIALT
                     GGWYKQAYLERPYAGIDANFYKVYRKGDIVQYFVRGGSFWDHGEWQDAGILVGASGFS
                     RLLFFQNFKMRQYLRVSYAKQFNRVGLDPLSINNPFGLRYYSSDSVRGTQRISVHSET
                     ISFINYKLLGFKFSPFVFADVALLTPEDDFQKSGVYYGLGSGLRARNENLVFKTIELR
                     LAYFPRKAYQSNSFAASLRFNIAFRYNTTYVHEPDIVQLNNDYQNNIF"
     gene            complement(5965..6477)
                     /locus_tag="VEV83_00160"
     CDS             complement(5965..6477)
                     /locus_tag="VEV83_00160"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HYK43547.1"
                     /translation="MQLFKLSFFILILAAFGCKVSSKTAETVSSKPAETAQTVAQQHP
                     GIQFIEDDWDLALKKAQSEHKLVFIDIYATWCGPCKMIKQYTFTDSAVGEFFNKNFIN
                     ITIDGEKGVGPQLMQQFAVNAYPTLIVTDDNGKPVLATEGYLPADYLLQFANEAVKRN
                     QQQPSLQSQN"
     gene            complement(6553..7677)
                     /locus_tag="VEV83_00165"
     CDS             complement(6553..7677)
                     /locus_tag="VEV83_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HYK43548.1"
                     /translation="MFPEDKKIKVLYIDDEVNNLLSFQSSFRRKYKVFIASSGAEGLN
                     ILNDERDIQVIICDQRMPHSTGVEFFQVVRKAHPNPVRILLTGYTDVEAIIDAINKGE
                     IFRYIKKPWDELELQNAIQNAHELYTTRWQLRRKVSELEKTNDELNRFVYSTSHDLRS
                     PLASIMGILNLSRMEKSVEDPNNYLSMIETCVNKMDSFIQKIIEYYRSIRVEEEQTEI
                     DFEETLEASIEICRMQRPDVKFNVVIDQPVKFINDGFRVSIILDNLISNAVKYQKPSS
                     SEAPTVNINVKADEYKAQVEIEDNGIGIVEEHLNNIFKMFFRSTSHVNGLGIGLYIVK
                     EALARIGGDISVVSTYAVGTIFRIMIPNLAKQQIASDIVN"
     gene            complement(7683..9860)
                     /locus_tag="VEV83_00170"
     CDS             complement(7683..9860)
                     /locus_tag="VEV83_00170"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7TM diverse intracellular signaling
                     domain-containing protein"
                     /protein_id="HYK43549.1"
                     /translation="MQLIKIIRSCILTLYVVFLLSPALAAEPILFSNPSRIVSVGKNL
                     EILEDKEGKYDERTIMAATGFHISTNDVPLFPIPDVNVWLRFSVTNNSSLNAVYLFIE
                     HFNVSKITLYKAESELKPIYVDGNALHHPADNSLPAYIKNLSLAPGTSGIFYMHVESV
                     HPVVFSTYVGSQPAIQEEIKKQIFTVSVYVGIVAAVFLYNLFLFFPTRDRNYFLYIMY
                     VFCLGFAQLTLAGYPFKFLWLSQPSLNYYAVPVTSCLAGVFGILFSIQFLRTNFYTPV
                     LHKILIATAALYALGIVFSLAHNNKLSYDVLDYNTPVVGILSIIAAFIVTAKGYRPAL
                     YYAISWLFFLAGLIVFSLRNIDVLPSNSFTTYILFMGSSIEAVLLSIALADKINTLKK
                     EKEQSQAEALQKSRENEQLVREQNVMLEQKVVQRTQEIQEANNQLSDALNNLKDTQTQ
                     LVEAEKMASLGQLTAGIAHEINNPINFVKSNINPLRLDVKDLLDVLHEYSSLHSIQDG
                     AILREKLSKIESLKEDIDVELIQKEIHNLILGIEEGAERTAEIVRGLRTFSRLDEAAL
                     KTVNIHDGIVSTLVLLKNSIPYNIKVEKEFNARGNIECFPGKLNQVFMNILTNAIHAI
                     KAKQEKEEEGFIWIKTRDVNNDSTEISIKDTGVGMTEEVKRRVYEPFFTTKEVGEGTG
                     LGMAIAFKIIEKHAGKIEIVSSPCAGAEFIITLPNHHPVSDHL"
     gene            complement(9867..10502)
                     /locus_tag="VEV83_00175"
     CDS             complement(9867..10502)
                     /locus_tag="VEV83_00175"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF018649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYK43550.1"
                     /translation="MRKIVSTLIFTFFINILPLVFKPELLLDYRAIIILIGGLTMFLT
                     QPAFSLEETLENKKTDRFSILIILVASGVSVSSSLVEWAYFGRKNFSLFLPALGIFMI
                     AAGLALRISAIITLGKFFTATARATKQQILVKKGLYGVIRHPSYLGAIIVMTGVPVLL
                     NNRVTLFSTIVLLTLAYSIRIKNEEKVLVSIFGEKYVRYSQRVKRMIPHIW"
     gene            complement(10504..11142)
                     /locus_tag="VEV83_00180"
     CDS             complement(10504..11142)
                     /locus_tag="VEV83_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43551.1"
                     /translation="MTSSAVDWMYSPSVFVIVVESMDRTKLFGGARIHAFTENGQLPI
                     EEATAQMDKRIHTVVRKWAQKGTGELCGLWNSIEVAGLGIGSLFPLRAGIVISEQIGL
                     NSLFFLCSPLTIRFNKWVGSRILHEVGNNGTFYYPKLDLLATAVLLEDAISLSNGHPR
                     EKDKMLSMRKNLTMTTQERSPFKNFYVTVQYALKLADADPQEFVLGLKTVNA"
     gene            11462..11926
                     /locus_tag="VEV83_00185"
     CDS             11462..11926
                     /locus_tag="VEV83_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK43552.1"
                     /translation="MKEKLINVLYVDDEPHNLTAFKAAFRRDYNIFLAESAREANEIV
                     QTSDIHVILSDQRMPVMTGIEFFESLIATRPEPIRILITGYTDINAVVDAINRGQVYK
                     YLTKPWNENDIRIFVDRAYEVFKLRKENEELSRKLLDANRKLEFLVRQSLLS"
     gene            12063..12380
                     /gene="trxA"
                     /locus_tag="VEV83_00190"
     CDS             12063..12380
                     /gene="trxA"
                     /locus_tag="VEV83_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HYK43553.1"
                     /translation="MAQEFTDSNFETNVLKSDKLTVIDFWAEWCGPCRAIGPVIEELS
                     KEYSGRVNVGKVNVDLNPSVSMNYGITSIPAILFIKDGKVVDKQIGAVPKSILEKKIQ
                     ANL"
     gene            12505..13767
                     /locus_tag="VEV83_00195"
     CDS             12505..13767
                     /locus_tag="VEV83_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HYK43554.1"
                     /translation="MQRFQGLIGILLILGLAFIFSNNRKKINRRLVLSGLALQIIIAL
                     LIFKVTIVGVFFEWLGHGMERLQSFARQGASFIYSGIVVTQNDGTVADYVKGGFVFAF
                     NVTATIILICALVAVFYHFGIMQRVVSALARAMNVIMRVSGAEALSNVASAFVGQVEA
                     QIMIRPYLKGMTQSELLASMSGSLACIAGGILIVYASMGAAAGLDLAPKLITASLMAA
                     PGALVISKIVFPETAESETFQRVTLEVRSSYINVIDAVAQGAADGFKIAMNVIAMLIA
                     FIALIALVDYVLLHIGHLFNPGFDLSLNYIFGKLFYPFAWSMGVPQQDISNGATLLGQ
                     KLTVNEFVAFQNLTSKHVPLVTEKGLVIISIAICGFANFSSVGMQIGGIGAIAPERRA
                     DLARLGLKALFCGTLASYLSATIAGILM"
     gene            13796..14311
                     /locus_tag="VEV83_00200"
     CDS             13796..14311
                     /locus_tag="VEV83_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HYK43555.1"
                     /translation="MVKFTTTILRFSEQGEKTGWTYIEIPADIAQKILPNNKRSFRVK
                     GKIDAHTIKGVALMPMGGGNFIMPLNASMRKGIGKRKGATVTAQLELDDTPLAIDKDL
                     MACMNDEPAAIKYFNSLPKSHQNYISNWIRSAKTEPTKTKRIAMAVSALSRNMGFVEM
                     LREQKAKKDLL"
     gene            complement(14303..15244)
                     /locus_tag="VEV83_00205"
     CDS             complement(14303..15244)
                     /locus_tag="VEV83_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HYK43556.1"
                     /translation="MKLPFKAIWKIIKCSASDFITCRITRMSAALAYYTIFSIAPMLI
                     LVISLSAVFYGRNAIEGSVYGEIRSFVGDDAALQIQALIKNATIAKGNAFASGASIAA
                     LIFGATGVFGEIQDSINFIWGLKAKPQRGFWKIILNRLLSFSIIVSLSFILLVSLLVN
                     TVLDLISTRLTDLFPGVEVYTAYAINLLITFLIITSLFAIIFKVLPDAKIKWKDVLTG
                     SVATALLFMFGKFAISFYLGTRNIGNTYGAAGSIVIILLWVYYSAIILYFGAAFTKHY
                     SQARGRRIYPNNYAVWTEHIEKEKSGSLQEVAPTPLQ"
     gene            complement(15356..16492)
                     /locus_tag="VEV83_00210"
     CDS             complement(15356..16492)
                     /locus_tag="VEV83_00210"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HYK43557.1"
                     /translation="MKKVFKILLLALFVSAGTVTVNEAKSQGVNVSFSVFYNSLKPYG
                     RWTHHPKYGQIWISNTRGFSPYSTGGHWAYTDYGWTWVSDYDWGWAPFHYGRWAYERS
                     YGWYWVPDYEWAPAWVAWRSSGDYYGWAPLSPGLSIGVDLSFGNGIPYDRWVFAPHRY
                     ITSPYISRYYVPRSRNTVIIKNTRVINNVTVKNNVRYVVGPRKDEVEKINHTKIQTLT
                     VSNSSRPGKTVINKNTVNVYRPVINDNDKTIVNKNSNNTTVEKNSNNTTVNKNNNNTS
                     TSKSTTTKSSDSKATEKKPEEQKPAVKKNTQQDQEKEKEQQKPPTSSNTNRQKVQPSS
                     EHANVASSKGTQISQEKRQQLTKKAPTQKPTASDKKNPKDHPTK"
     gene            16656..17792
                     /gene="tgt"
                     /locus_tag="VEV83_00215"
     CDS             16656..17792
                     /gene="tgt"
                     /locus_tag="VEV83_00215"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HYK43558.1"
                     /translation="MPIGFQIEYNDVVTGARAGTLTTKHGKVSTPFFMPVGTVGSVKA
                     VSQQQLSADIGAEIMLSNTYHLYLRPGVDVLQAARGLHNFIGWSKPILTDSGGYQVFS
                     LAQSRKINEQGVMFQSHIDGSRHLFTPEKVMDIQRSIGADIIMAFDECPPGQSEYLYA
                     KNSMELTNRWLERCIKRLDETDDLYGYGQTLFPIVQGNTYHDLRIASCEYAASKNADG
                     NAIGGLSVGEPENVMYEITALCCNNLPADKPRYLMGVGTPWNILECINLGVDMFDCVM
                     PTRNGRNGMLFTTHGVINIKNKKWATDFSPIDESLPCTVSNHYTKAYLRHLFVADELL
                     GLQLASIHNLAFYTWMLREARKQMVDGNFLSWKSSAVEQFRQRL"
     gene            17915..19009
                     /locus_tag="VEV83_00220"
     CDS             17915..19009
                     /locus_tag="VEV83_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HYK43559.1"
                     /translation="MKKLDWYILKKFLVTFFFCVFLFTIIAVVIDVSEKTDDFVKAGL
                     SFKDIVNKYYLGFIPYIDALLFPLFVFIAVIFFTSKMALRSEIIAILASGTTYGRMLR
                     PYWLGGILLALLLLFASSFVIPKANAKRTDFEAKYIKVNSSYDPLVNRPSRNMYFRID
                     SFTYAGIRNYDTTTKYGGPFFMHRINDNQLTYNLRAESLQWDTASRKWKLNNVVERTI
                     NGLHETVKREKLLLFNFNFKPADLNQDEYAKDKLNTPQLHHYIADQQLRGTEGLNTLE
                     VEEYRRFATPFSVLVLTMIGAVVASRKVRGGSGAHLAIGFVTAAIFILMDRFSTIFST
                     KSSFPPLIAAWLPNLIFTFVAIYFYRKAPK"
     gene            19208..20533
                     /locus_tag="VEV83_00225"
     CDS             19208..20533
                     /locus_tag="VEV83_00225"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase, eukaryotic"
                     /protein_id="HYK43560.1"
                     /translation="MGVLKDRFREKADSAAAEIKELLQANGNKVIGDVKLAQVYQGMR
                     GITGLVTETSLLDPQEGIRFRGYSIPELREKLPKANDGTEPLPEGLFHLLLIGELPTN
                     DEANHITSVLQRRSHVPTHVFATIDALPLNAHPMTMFVTAVMALQTESNFAKRYAEGM
                     SKKDHWSAIFDDSMDLIARLPRIAAYIYRRKYKENAHIQPNGLLDWAGNLAHMMGFED
                     ESFKELMRLYMTIHSDHEGGNVSAHTTHLVGSALSDPYLSYAAGMNGLAGPLHGLANQ
                     EVIKWIFEMQDELGTKTPSKEQIGEYVRKTLQQGKVVPGYGHAVLRKTDPRFTAQMEF
                     GKKHMPDDPLVQTVWNVYEAVPPILQSLGKIKNPWPNVDAHSGALLVHYGLVEYEFYT
                     VLFAVSRALGVLASLCWDRALGFPIERPKSVTTESVKLWLQGKDEIWEG"
     gene            complement(20535..>21264)
                     /locus_tag="VEV83_00230"
     CDS             complement(20535..>21264)
                     /locus_tag="VEV83_00230"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK43561.1"
                     /translation="SSVSKESLREYFNFPFDVMEIAPCFLIDVQRFIGAWKDHLRIRD
                     AFMEDEFEEEKLALNGDRVQYKNVIAKKIIYCNGIEAASGKYWCNLPFVGNKGQALIV
                     NSTKIPRDFMYKFGHLTMIPWTNDLWWVGSSNELQFDNELPTEDYKTKTVSILTSILK
                     AEFAVTGHVAAIRPAAVERRPFVGIHPHCDNVGILNGMGSKGCSLAPWFAKEMTEYLT
                     TGKPINPLADVKRYSNVLKRMNED"
BASE COUNT         5994 a         4657 c         4593 g         6020 t
ORIGIN      
        1 tggtgcatgt atcaatcaaa aatacctaaa tcatttctac attgcggcgg tgacaatcca
       61 gcaggcatat cagcaattat catcgcaact ttccgcgatc tatgatgcgc gtgaggccgc
      121 gaacattgca gatctcgtta tcgaacacat ttcaagtgaa aaaaaaattg atcgtttgct
      181 gaacaggaat aaagcgctcg atacggatca gcaacaactg cttgccaatt acactgaaaa
      241 attgttgcag catcaaccgg tgcaatatgt tttgcatgca gcatggttcg caggtctcaa
      301 actttatgtg gatgaaaacg tattgatccc ccgccccgaa accgaagaac ttgttgaatg
      361 gatcgtctca gatttgacaa ttcacaattc acaattcaca attctcgaca tcggcacagg
      421 cagtggctgc atcgcgatcg cattgaaaaa aaaattacca tcgtcgcaat tgtctgcgct
      481 tgatattagt gaagctgcct tgaaaattgc acaacgaaat gcaattgata acaattcaca
      541 aataaatttt ttctacgcag atattttgca cgaagaatat attgaaaatc ttccgcgctt
      601 cgacatgatc gtgagcaacc ctccttatgt aaaaagaaac gaagcggaag aaatgagaac
      661 aaatgttttt ttgtacgagc cgcacgtcgc attatttgtt ccggaagaag atgcactcct
      721 cttctatcgg cacattgcac ggtttgcaat tcatcacctg aaggaaaatg gttgtttgta
      781 tgtagaacta aaccaattgc tcgcggatga agttgcggac ctctttcgcg gttcgggatt
      841 tcgttcagta gagatcaaaa aagatatgca gggcaaagac cggatgatca aagcaacacg
      901 tagcgagtag ggagatttta acgacctgct cgattttttt ccccgaaaca aacgattaac
      961 tttgccctat gatgatgggt gcagatacgg ccgctgaaac atggcaggaa gttgacactg
     1021 acgtccttac cacgacgttt cattcataca acctgatagt gtggaatgat gaagtaaaca
     1081 cgttcgattg ggtgatcgaa acgctggtcg aagtctgcgg ccacactccg gaacaagccg
     1141 agcaatgcgc gttcattata catttccacg gcaagtatgc ggttaagcag ggcgattatg
     1201 atacacttaa accaatgcgc gaagcgatca ccgaccgtgg gataaatgcc accattgaag
     1261 aagttgtagc ctcctgatct tcctcccgat ttttcatggc actttatatc ctggataata
     1321 atgtttggtt tcctcctgcc gacgaaacca ctgaagaagg attattagca atcggaggcg
     1381 atctctctga agaacgtctt ttactcgcat acaaaaatgg catctttccc tggtttgaag
     1441 atgactatcc attatggtgg tgccctgatc cgcgattcgt attatttccg caggaactga
     1501 agatcagcaa gagtatgcaa caagtgcttc gaaaagcaga atttgatttt cgaaccaata
     1561 ccgactttgt gcaggtgatt catcagtgca aaactattaa acgcgaaggt cagcacggca
     1621 cctggataac ggaagcaatt gaggaagcct atactgacct ttttaaaaaa ggatatgctc
     1681 atacggccga gacctggaaa ggtgataccc tcgtcggcgg cctatacgga atccggctcg
     1741 gtaagatttt ctttggggag agtatgttca gcctcttcgc caatgcgagc aaatttgcat
     1801 ttattaagta tgtccaactt ctccagcagg aaggcgtcca attaatagac tgccaggtgt
     1861 atacggaaca cctggagact ttgggtgccc ggatgatacc acgaaaagac ttcctcgaca
     1921 ttttaaaaat ttacgtttga ataaattgga ctaccttctg cattggagat tacctgttcc
     1981 atgggtccag tttgaaatcg aaatacatat taaagcttgc atcaattgct tttctgctct
     2041 tagtctgcgc tcgtgcgcgc ggacaggtgc atgataccag tctcacgccg aagaagaaca
     2101 atatctttca ttatgcaatg cactttatta aaaagagcag ttccaatagt attgatgcgg
     2161 acggcttgct tgccctgaaa agcgaagaag cgtttttgcc ttatgaaggc aagaccatca
     2221 ggtatatcat cgtcaatcaa taccggttcg agaaaacgtt tatcgacacg accaaaagca
     2281 tcaactattt tggcacaaaa atcctgaata ggctgcataa ggataccagg caatgggcca
     2341 tacgcgatga tcttttcata cacgaaaaca caccgcttgc cgtttaccag cttgcagata
     2401 acgagcggta cctccgctcg ctcgattata tacaggatgc gcgtattatt gtaaaaccca
     2461 ttactggcac gcaggattca gtagatgttt atgtaattac aaaagacttt tttagtttga
     2521 atggtcaact gaacaatgca agtcctggaa aatttaaagc aaaggttggt gacgtgaacc
     2581 tgtttggtgc ggcgcaaaat ttacagggcg cgattttaat tgaaaaagac cgtagtcctg
     2641 ccattggaac agggattatg tacacaaaat ataatgtggc gggcactttt attgatgcta
     2701 ctgtgggcta tacaaccatc aaccgggatc ttcatgacgg cactatggat gaacatgcag
     2761 gatacgttac attacaaaga attctggtat cgcaatactc gcattttgcc ggcggcttaa
     2821 cagtaggtaa atatcaatcg ttcaataatt attcaaagcc tgaggattat ttttttaatt
     2881 acagctatca tgtctttgac tcctggcttg gttataatct tggtcccgat aaacttatta
     2941 aagacagaac acgtaaagcc aatcaattta tcagccttcg ttatttcaac acgttttttt
     3001 cgcaaacgcc tgtgcaggtg caggacaagc tcaattttcg ttttaataat aaggaagcag
     3061 tgctggctca gtttactttt tttaagcaag gttattataa aacaaattac atctacggat
     3121 ttggaaccac tgaggatatt ccttacggtt ataacatggc gtttactttg ggcatgtatc
     3181 agcaggctta tctctcccgt ccgtacgcgg gcttagatgc caaccgttat aaggtgtaca
     3241 atagaggaga catcgttcaa tactttttgc gggcaggcag cttttgggat aggggtaaat
     3301 ggcaggacgc aaacattctt ctcggggttt ctggtttcag ccggttgttc ctgtttaaca
     3361 attttaagct gcgccaatat atgcggcttt cttataccag gcagttcaac cgcataggac
     3421 tcgatccgct tggcatcaac aatgcattcg gactccgcta cttcagttcc gattcgataa
     3481 ccggcaatca acgcttcagc ttacacagtg aaacaatcac atttataaat tataaggttt
     3541 taggatttaa attttcgccg tttgcatttg ccgatgttgt tgcgcttaac ctttataatg
     3601 aaacgttcaa taaatcagtc tggtattatg ggcttggcgg tggcatacgt accagaaacg
     3661 aaaatctcgt attcaggacc tccgaacttc gtattgttta ttttccacgc aaggggaatc
     3721 aaacgcaatc atttaaagcc acgctggcca ttaatttcag gtttcgatac aatactaatt
     3781 atgtactcga accggatatt attcaactca acagtgattc tcagaacaat attttttgag
     3841 cctgaagatt tctgaattcc agcttgcagt ttcatttcac ccaggtttct ttttcagctt
     3901 cattgacaaa ttgtagcaaa taatccgcgg caaaaaggcc catagtcacc aacaggtttg
     3961 tcggcccagg atcaaatcaa agcggatgcg cggttgggca ataagtttag gccgatgggt
     4021 ttacctggct gaatgatggc ctgaaacgtt ggcttcgccc cgaaattttg gattagttta
     4081 tgcagtaggg taattattca acactttgaa aaagtgagat acattgtaaa gacccttact
     4141 gttatttgca ttttgctgat ctacgctttt cacccggtcc tcgctcagcc gggggattca
     4201 acacgcactg ccccaaaaaa taacatcttc cattatgcaa tgcattttct aaagcgcagc
     4261 cgcactgaca gtgtcgttgg agaagacctt ctaactacaa aaagtgaaca ggcattttta
     4321 ccgtaccagg gaaagatcat ccggaatatc atcatcaatc aataccactt tgaaaaaacg
     4381 ttctcggata cggcaaagtc gataaattat tttggcaccc gggtccttaa tcacctgcac
     4441 agagacactc gctactgggc cattcgcgat aatctttttt taaaagaaaa tacgcctctc
     4501 gttgcatatc gctgtgctga caacgaacgc tacctgcgtt ctctcgagta tatacaagac
     4561 gcaaggatcg tagtaaaacc gatcctcggt tcgcaggatt ctgtagatgt ttacgtgatc
     4621 accaaagatc ttttcagtat gaccgggcaa ctgaataacg taagtacggg aaaattcaaa
     4681 gcacaagcgg gcgacgtaaa cctgatgggc ggagcacaaa acctgcaggg gacaattatg
     4741 gttcaaaaaa acagggatcc tgcgtttggt tttggtctca ggtatacaaa atataatgtg
     4801 ctgcactcgt tcacggactt tacagttgcc tactcaacca tcaacccgaa tctgtatgac
     4861 ggttcaaacg acgagcgtgc gatgtatgtt aacctgcaaa gggacctcat ctctcaatac
     4921 tcccatcttg ccggtgggtt gactatcggc cggaaccaat cgatgaacag ctattcaaag
     4981 cctgaaaata tctacttcaa ttattcttac aatctatttg atgcatggat tggctataat
     5041 cttggagttg aaaaatttat taaggaccca ggcagaagag ataaacaatt catcagcctg
     5101 cgatactaca acaactattt tacgcaaaca cctgagcaag tagcgaataa acttgatttc
     5161 cgtttcaata gcagggaagc agtattagca cagttcactt ttttcaaaca ggaatattat
     5221 aaagcaaatt ttatttacgg tttcggcacc acggaagata tcccttatgg atacaatatc
     5281 gcgctgaccg gtggttggta taagcaggcc tacctcgagc ggccatacgc tggcatcgat
     5341 gcgaacttct ataaagttta cagaaaagga gacatcgttc agtacttcgt tcgcggcgga
     5401 agtttttggg accatggcga atggcaggat gccggcattt tagttggcgc atccgggttc
     5461 agcaggttac tgttctttca gaacttcaag atgcggcaat atttgcgcgt ctcttatgcg
     5521 aaacaattta accgcgtagg actcgatccg ctatcgatca ataatccttt tggtttgcgt
     5581 tattacagtt cagattctgt cagaggaacg cagcggatca gtgtgcattc agaaacgatc
     5641 agcttcatca attataaact acttggtttc aaattctctc cttttgtttt tgcagatgtg
     5701 gcgctgctaa cacccgaaga cgattttcaa aagtccggag tttattatgg cttgggaagc
     5761 gggcttcgcg cccgtaacga aaacctggtt tttaaaacga tagaattgcg gttagcctat
     5821 tttccaagga aggcatatca atcaaactct tttgcagcat cgttacgatt caatattgct
     5881 ttccgctaca acaccacgta cgtgcacgag cctgatatcg ttcaactgaa caacgattac
     5941 caaaacaata ttttctaaca ggaattaatt ttgtgattgc aatgaaggtt gctgttggtt
     6001 tctttttaca gcttcatttg caaactgcag aagatagtct gcaggtaaat atccttcggt
     6061 tgccaaaact ggtttcccgt tgtcatcagt aacgatcaag gtcggatagg cattcaccgc
     6121 gaattgttgc atgagttgcg gccccactcc cttttcgcca tcaatagtaa tattgataaa
     6181 attcttatta aaaaattctc ctaccgcgga gtcagtgaaa gtgtattgtt tgatcatttt
     6241 gcatggcccg caccacgtag cataaatatc aataaagacg agcttgtgtt ctgactgcgc
     6301 ttttttcaac gcgaggtccc agtcgtcttc gatgaactga atgcctggat gctgctgcgc
     6361 gaccgtttgc gccgtctctg caggtttgga agaaacggtt tctgctgttt tagacgaaac
     6421 cttacatccg aaagccgcga gtattaaaat gaaaaaagaa agcttgaata attgcatttg
     6481 cacgagccta ttttttggtt ttctcaccac gcgataataa gcgaagtaaa aaaaaaattc
     6541 ccagtccgaa tcttaattaa caatatctga ggcaatctgc tgttttgcaa gatttgggat
     6601 cattatccgg aatatagttc ccaccgcata agttgaaacg actgagatgt cgcctcctat
     6661 cctcgctaac gcttccttta ctatgtacaa tccaattcct aagccgttca cgtgtgaagt
     6721 actgcgaaaa aacattttga aaatgttatt cagatgctct tcaacaatgc cgatcccatt
     6781 atcctcaatt tctacctgcg ccttatactc gtctgctttc acgttaatat taacagttgg
     6841 cgcttcagac gacgacggct tttgatattt caccgcgttt gaaatcaggt tatcaagaat
     6901 gatagacact ctgaaaccat cattaatgaa cttcaccggc tggtcgatca caacattgaa
     6961 ctttacgtcc ggccgttgca tcctgcatat ttcaatgctg gcctccagcg tttcttcaaa
     7021 atcaatttca gtttgctctt cctctacgcg tatgctgcgg taatattcaa tgatcttttg
     7081 tatgaatgaa tccattttat tcacgcacgt ttcgatcatg cttaaataat tgttcgggtc
     7141 ttccaccgac ttttccattc ttgacaaatt caggatcccc attatggaag caagcggaga
     7201 gcgcaggtcg tgtgaagtgc tgtaaacaaa acggtttagc tcatcgttcg ttttttcaag
     7261 ctctgaaact ttgcgcctta attgccagcg cgtggtgtac agttcgtgtg cgttctgaat
     7321 tgcattttgc agttccagtt catcccacgg ttttttaata taacgaaata tctcgccttt
     7381 gttgatggca tctatgatag cctcgacatc ggtataaccg gtgagcagaa tgcgtaccgg
     7441 gtttggatgt gcttttctta ccacctggaa gaattcaact ccggtagaat gaggcattcg
     7501 ctgatcgcag atgatcacct ggatatctct ttcatcattc aaaatattca gcccctctgc
     7561 tccggaagac gcgatgaaaa ctttatactt tctgcggaat gatgactgaa aactcagcag
     7621 gttattgact tcgtcgtcga tatataaaac tttgatcttt ttgtcttcgg gaaacatggc
     7681 agctagagat gatccgatac cggatgatga ttcggtaaag ttataataaa ttcagcccct
     7741 gcgcaaggag acgaaacgat ctcaattttc ccggcgtgct tttcaattat tttgaacgcg
     7801 atggccattc cgaggccagt cccctctccc acttccttgg tcgtgaaaaa cggttcatat
     7861 acgcggcgtt taacttcttc cgtcatacca acacctgtgt cttttatgga aatttcggtt
     7921 gaatcattat tcacgtcacg ggttttgatc caaataaatc cttcctcttc tttttcctgc
     7981 tttgctttga tcgcgtgtat ggcattggta agaatattca tgaaaacctg gttaagcttg
     8041 ccgggaaagc actcaatatt gcctcgcgca ttaaattctt tttcaacttt tatgttatag
     8101 ggaatactgt tcttcagcag caccaatgtt gaaacgatgc cgtcatgaat atttactgtc
     8161 ttgagcgccg cttcgtcgag ccggctgaag gttctcaggc ctctcacaat ttcagctgta
     8221 cgttcggcgc cttcctcgat acccaggata aggttatgta tttctttttg gatcagttca
     8281 acatctatat cctccttcag cgattcgatc tttgaaagct tctccctcag tatcgctccg
     8341 tcctgtatag agtgaaggct gctatattcg tgcagtacat caagcaggtc ttttacatca
     8401 agtcgcagcg ggttgatgtt tgattttaca aaattgatcg ggttgtttat ctcatgagcg
     8461 atgccagcag taagttgtcc gagtgacgcc attttttcag cttcgacaag ttgtgtctgc
     8521 gtatctttta aattatttaa cgcgtcgctt agctggttgt ttgcttcctg tatttcctgc
     8581 gtgcgctgca caactttttg ttcaagcatc acattttgtt ctcgcacgag ttgttcgttt
     8641 tcgcgcgact tctgtaacgc ctccgcttgc gactgctctt tctctttttt cagcgtattg
     8701 atcttgtcgg caagcgcaat tgacagcaga actgcttcaa ttgacgaacc cataaacaag
     8761 atgtacgttg taaaagaatt tgacggcaac acgtcaatgt tgcgtaagct gaatacgatc
     8821 agtcccgcaa gaaagaacag ccacgagatc gcataatata acgccggcct gtatcctttt
     8881 gcggtaacaa tgaatgcggc aattatcgaa agtattccaa cgaccggtgt gttataatcg
     8941 agtacgtcgt agcttaactt attgttgtgt gccaaactga aaacgatccc gagcgcatat
     9001 aaagctgcag tagcgatcag gatcttatgc aagacaggcg tataaaaatt agttcttaag
     9061 aattggatcg aaaacaaaat tccgaaaact ccggcgaggc acgatgttac gggcaccgcg
     9121 tagtaattca gagaaggttg agaaagccaa agaaatttga acgggtatcc tgccagcgtg
     9181 agctgagcaa agcccaaaca aaaaacatac atgatataca aaaaataatt tcggtccctg
     9241 gtgggaaaaa ataggaaaag gttataaagg aacaccgccg ctacaatgcc aacgtatacc
     9301 gaaacagtaa atatttgttt tttgatctct tcctggatcg caggttgtga tcccacgtat
     9361 gtggaaaaaa caaccggatg aacactttca acgtgcatat aaaaaatgcc gcttgttccg
     9421 ggtgcgagag acaggttttt aatgtatgcg ggtaatgaat tgtcagcagg atgatgtaat
     9481 gcattaccat caacataaat tggtttcaat tccgactctg ctttgtataa tgtgatcttc
     9541 gaaacattga aatgctcaat aaaaagatat actgcgttga gtgaagaatt gtttgtaaca
     9601 gaaaaccgca accaaacgtt cacatcgggg ataggaaata aaggaacatc gttcgtgctt
     9661 atatgaaagc ccgtcgccgc catgatcgtg cgttcatcat acttcccttc tttgtcttca
     9721 agtatctcca ggttttttcc aacgcttacg attcgtgagg gattgctgaa caaaatgggt
     9781 tcggcagcaa gtgcaggtga cagtaaaaaa accacgtaca gcgtgagtat gcacgacctt
     9841 ataattttta tgagctgcat aagctgttac cagatgtgag gaatcattct ctttactctt
     9901 tgcgagtatc gaacgtattt ctctccaaag atagatacca gtactttttc ttcgttctta
     9961 atgcgaatgc tgtacgctaa agtcagcagc actatcgttg aaaaaagagt caccctgtta
    10021 ttcaaaagca ccggcacacc agtcattacg attattgccc ccaggtatga aggatgcctg
    10081 atcacgccat acagaccctt tttcaccaag atctgttgtt tcgttgcgcg agctgttgcc
    10141 gtgaagaatt ttcccagcgt aatgatggcg gaaatgcgca acgctaagcc agccgcgatc
    10201 ataaaaattc caagcgccgg caaaaacaaa gaaaaatttt ttcgtccgaa ataagcccat
    10261 tctaccaatg acgagctcac actgacgccc gaggcgacga ggattatcag aatagaaaac
    10321 ctgtcggttt ttttgttttc aagtgtttct tccaaactaa aagcgggttg cgtaagaaac
    10381 atagtaagcc caccaattaa gatgatgatg gccctgtaat ccagcaacag ctccggcttg
    10441 aagaccagtg gcaaaatatt aatgaaaaaa gtgaagatca gcgtacttac aatttttcgc
    10501 atcttacgcg ttgacagttt ttaggcccag tacaaattcc tgcggatcag catcggctaa
    10561 ttttaatgca tactgaaccg ttacgtaaaa gtttttaaac ggagatctct cctgggttgt
    10621 catcgtaaga ttctttcgca tggacagcat tttgtccttt tcacgcggat ggccgtttga
    10681 caagcttatc gcgtcttcca gcaatactgc agttgcaagc aaatccaact ttggataata
    10741 aaacgtcccg ttattgccaa cttcgtgcaa aatacggcta cctacccatt tattaaaacg
    10801 aatggttaat ggcgaacaga gaaagaagag tgaattgagc ccgatttgtt ccgatatcac
    10861 aatacccgcg cgcaacggaa acaagctccc aatgcccaac cctgccactt cgatcgaatt
    10921 ccaaagtccg cagagctctc ctgttccctt ttgtgcccac tttctcacga ccgtgtgaat
    10981 gcgcttgtcc atttgggcgg ttgcctcttc tatcggcagt tgtccgtttt cagtgaacgc
    11041 atgaatacgg gctcctccaa ataattttgt acggtccatc gattctacca ctataacaaa
    11101 taccgaagga ctgtacatcc agtcgaccgc agacgatgtc accttatata tgccatgatt
    11161 ttcgaggact ttttgatggc ccagtatgaa tcgaagacaa gtatccggat catgcgttgc
    11221 tctaaaagcc cttatctgta tttcagtctc catccctgca ataaacgcga caaattaaaa
    11281 aaacttcgca aagctgtgaa aattaattga aatcaaacgg tgccgcaatc acgtaaattg
    11341 ttgtcaatgt tgagaaaaaa tgaatatttt agatttttgt attgcgtgcc aattcaggga
    11401 gcatgacaca attttttgta tgcggactcg atcttagtcc tgttattaaa tccaatgtct
    11461 gatgaaagaa aagctgatta atgtgcttta cgtagatgac gaaccgcata acctgacggc
    11521 atttaaagcg gcttttcgcc gcgattacaa catctttttg gcagagtctg cccgtgaggc
    11581 aaacgaaata gtacaaacgt ccgacattca tgttattctc agcgatcagc gcatgcccgt
    11641 gatgacgggt atcgaatttt tcgaatcgct gatcgcaaca cgcccggagc cgatcaggat
    11701 ccttattaca ggatataccg atattaacgc tgtggtagat gcgattaacc gcggccaggt
    11761 ttacaaatac cttactaaac cgtggaacga gaatgacatc cgcattttcg ttgaccgtgc
    11821 ttacgaggta tttaagctga gaaaagagaa tgaagaacta agcaggaagt tgctcgacgc
    11881 gaaccggaaa ctcgaatttc ttgtcaggca gagtttatta tcctgattcc gactgcctcg
    11941 atgtcagcat ctttcttact attttctgtg cacaactctt aataagtcat taatagcagg
    12001 tattttcatt tggacttatt tttgctttga taaagtaatt tttacatcaa aataatcaat
    12061 gtatggcgca ggaattcacg gactcaaatt ttgaaacgaa cgttttgaaa agcgataaat
    12121 taacagtaat agatttttgg gcagaatggt gcggcccatg tcgcgcgatc ggtcccgtta
    12181 tcgaggaact gtcaaaggaa tattcgggaa gggtaaacgt aggcaaggtg aacgtagacc
    12241 ttaatccttc ggtaagcatg aactatggca tcacttcgat ccccgctatt cttttcataa
    12301 aagatggaaa agtagtggac aaacaaatcg gcgctgtgcc aaaatctatt ctcgaaaaaa
    12361 agatccaggc aaatctttga caagccggca aaaattatta atgcccccgc cgcacggggg
    12421 cttttttatt cgcacgatcg ctcatggagt aaaccaccaa caataaactt tgattatctt
    12481 gaagtttaat ttcacgacac taacatgcaa cgcttccagg gtttgatcgg cattctgtta
    12541 attctgggct tagctttcat cttctcaaac aatcgaaaaa aaataaaccg cagattggtg
    12601 ctcagcggcc tggcgctgca gatcataata gcattattga tatttaaagt aacgattgtg
    12661 ggagtgtttt ttgagtggct cggtcatggc atggaacgac tccagtcctt tgcacgacag
    12721 ggagcttcgt tcatatactc aggtattgtt gttacacaga atgatggcac cgttgctgac
    12781 tacgtcaaag gcggttttgt cttcgccttc aatgtcactg cgactatcat cctcatttgt
    12841 gcgctggtgg cagtcttcta tcattttggt atcatgcaac gcgtggtttc agcgctcgcg
    12901 cgcgcgatga atgtgatcat gcgtgtgagt ggcgccgagg cgttgagtaa tgtagccagc
    12961 gcttttgtgg gacaggtcga agcgcagatc atgatacgtc catacttaaa aggcatgacg
    13021 caaagcgagc tgctcgccag catgagtgga agccttgcgt gtatcgcggg tggaatactg
    13081 atagtgtatg caagtatggg cgcggcggcg ggccttgatc ttgcaccaaa actcatcacc
    13141 gcgagcttaa tggcagcgcc cggtgccctc gtgatttcaa agatcgtttt tccggagact
    13201 gcagaaagcg aaacttttca acgcgtgacg ctggaagtaa gaagcagtta cataaacgtg
    13261 atcgatgcag tcgcacaagg cgccgctgac ggtttcaaga tcgcaatgaa tgtgatcgcg
    13321 atgctcatag cctttattgc cttgatcgca ttggtggatt atgttcttct gcatatcggt
    13381 catcttttca atcccggttt tgatctttcg ctgaattata tttttggcaa attattttac
    13441 ccgttcgcat ggagcatggg cgtaccccaa caagacatca gtaacggcgc tactttgctc
    13501 ggccaaaagt taacagtgaa tgagtttgtg gcttttcaga atttaacgag caaacatgtt
    13561 ccgttagtga ctgaaaaagg gctcgtgatc atcagtattg cgatttgtgg atttgcaaac
    13621 ttcagcagcg tcggcatgca gatcggcggc attggcgcga tcgcaccaga gcgcagagcg
    13681 gatctggcac ggctcgggtt gaaagcgttg ttctgcggaa ctctcgcgtc ctatttatcg
    13741 gcaaccatcg caggtatttt gatgtaataa ttttgacgat ccaagacata tcatcatggt
    13801 aaagtttacg acaacgatct tgcgattttc agaacaggga gaaaaaaccg gctggaccta
    13861 tattgaaata cctgcagata tagcgcagaa aattcttcca aataataaac gatcattccg
    13921 cgttaaaggc aaaattgatg cgcacacgat aaaaggcgtg gcgttgatgc cgatgggcgg
    13981 aggaaatttt atcatgccgt tgaacgctag catgcgcaaa gggatcggca aacgaaaagg
    14041 ggcaacagtt accgcgcaac tggaactgga cgatacaccg ctggcaatag ataaagatct
    14101 tatggcgtgc atgaatgatg aacctgccgc gatcaagtac ttcaattctc ttcctaaaag
    14161 tcatcaaaac tatattagta actggatcag aagcgcgaaa actgaaccaa caaaaacaaa
    14221 acggatcgca atggccgtat ctgcattatc gagaaatatg ggtttcgttg aaatgttgcg
    14281 tgagcaaaag gcaaagaaag atctactgta aaggcgtggg cgccacctcc tggagtgaac
    14341 ctgatttttc tttctcgatg tgttcggtcc aaactgcata gttgttagga tatattctcc
    14401 ttcccctcgc ctgcgaataa tgttttgtaa aagcagcgcc gaaataaaga atgattgccg
    14461 aataataaac ccataagagt atgatcacaa tggagcctgc tgctccataa gtgtttccaa
    14521 tatttcttgt tccgaggtag aaactgatgg caaacttgcc aaacatgaaa agcaaggctg
    14581 tggcaacaga accggtaagc acatctttcc acttgatctt tgcatcgggc aacactttaa
    14641 agatgatcgc gaacaaggac gtgatgatca aaaatgtgat caataaattt attgcgtagg
    14701 ctgtgtacac ttcaacgcct ggaaataagt cggtaagacg ggtagaaatc agatctaaaa
    14761 cagtattcac caacaaagag actaagagaa taaaactgag gctaacgata attgaaaagc
    14821 ttagcagccg gttgagaatg atcttccaaa atccgcgttg aggttttgct ttcaagcccc
    14881 aaataaaatt gatcgagtcc tgaatttctc cgaatacacc ggtagcgccg aagatcagcg
    14941 cagctatgct tgctccggag gcaaacgcat ttccttttgc aatcgtcgca ttttttatca
    15001 gtgcctggat ctgtaaggca gcatcatcgc ccacgaacga tcttatctct ccatacacgc
    15061 tcccttctat cgcatttcga ccataaaaca ccgcgcttaa actgatcacg aggatgagca
    15121 tcggcgcaat tgaaaatata gtatagtacg ccaacgctgc gctcatgcgc gttatccggc
    15181 aagtgataaa gtcactggcg gaacatttga taattttcca gatcgcttta aaaggcaatt
    15241 tcattccatc tgtttataaa gtgttgtgaa ctcaatttcg aaacgacgca aaacccgcat
    15301 aaaaataaaa aaaccggcta atcgaaatta accggctttc ttttttaagt gctatttatt
    15361 tagtcgggtg atcttttgga ttctttttat cgctcgcagt tggcttttgt gttggcgctt
    15421 ttttcgtcaa ctgctgcctt ttctcctgcg aaatttgtgt tccttttgag cttgctacgt
    15481 ttgcatgttc agacgacggc tgaacttttt gcctgtttgt attgctgctg gtaggcggct
    15541 tttgctgttc cttttctttt tcctggtctt gctgtgtatt cttctttact gcaggcttct
    15601 gttcttcagg ctttttttca gttgccttgc tatcgctact cttcgtagtt gtgctcttgc
    15661 tggtcgacgt attattgttg ttcttattta cagtggtgtt gttgctgttt ttttcgaccg
    15721 ttgtgttatt agaattttta tttacgatcg tcttatcgtt atcatttatc accggcctgt
    15781 aaacattaac tgtgttctta ttgatgacgg tcttaccggg tctggaagaa ttagatacag
    15841 tcaacgtctg tattttcgta tgattgatct tttctacctc gtcctttctc gggccaacta
    15901 cataccgtac attattttta acggtaacgt tgttaatcac ccttgtgttt tttatgatga
    15961 ccgtattgcg actacgcgga acataatacc tcgaaatgta aggacttgtt atatacctgt
    16021 gcggcgcaaa tacccacctg tcgtacggaa taccgtttcc aaaacttaaa tcaacaccga
    16081 tacttaatcc gggagacaaa ggagcccatc cgtagtaatc accacttgat ctccatgcta
    16141 cccatgcagg agcccattca taatcaggca cccaatacca accgtaactg cgttcatatg
    16201 cccagcgtcc ataatggaac ggagcccagc cccaatcata atcagaaacc caggtccatc
    16261 cgtagtcggt gtaggcccag tgacctccag ttgaataagg gctaaaaccg cgggtattag
    16321 atatccatat ttgaccgtat tttgggtgat gcgtccagcg cccgtaaggc ttcaatgaat
    16381 tatagaagac agagaagctt acattcacac cttgcgattt tgcttcattg acggtaaccg
    16441 taccggcgct tacaaacagc gccagaagca aaattttaaa gacttttttc ataacaattc
    16501 agattttatt ttttaaaaaa attggttcat cgagttcctg tattaagaag gaaaatcaag
    16561 ccaaaggatt agtgcgtaat tgttaaaagc cattaagttt ttacagcact ttttgagtat
    16621 ttctttccct aaaaagcgac aactacattt gcaaaatgcc gatcggtttt caaatcgaat
    16681 acaacgatgt tgtcaccgga gccagagctg ggacacttac cacaaaacat ggaaaagttt
    16741 caacaccttt tttcatgccc gttggcacgg taggttccgt taaagctgtt tcgcagcaac
    16801 agttatcagc agatattgga gctgagatca tgcttagtaa cacttatcat ttgtatttac
    16861 gtccgggcgt tgatgttttg caggcagctc gcgggctgca taacttcatc gggtggagca
    16921 agccaatact tactgatagt gggggatacc aggttttttc gcttgcacaa agcagaaaaa
    16981 taaatgagca aggtgtgatg ttccaaagtc atatcgatgg tagccggcat ttgttcacac
    17041 cggaaaaagt aatggacatt cagcgcagta ttggtgccga cattatcatg gcatttgatg
    17101 agtgtccgcc cgggcagtct gaatatctat atgcgaaaaa cagcatggag ttaacgaacc
    17161 gctggttgga aaggtgtata aaacgtttgg acgaaacaga cgacctctac ggttatggac
    17221 aaactctttt tcccatcgtg cagggcaata cataccatga tttgcggatc gcctcatgtg
    17281 aatatgcggc ttcaaaaaat gccgatggaa atgcgatcgg aggactcagt gtaggtgagc
    17341 cggaaaatgt gatgtatgaa ataactgcac tttgttgcaa caatctgccc gcagataaac
    17401 cgagatacct gatgggtgtt ggtacaccat ggaacatact tgaatgcatc aaccttggcg
    17461 tagacatgtt tgattgtgtt atgcctacac gcaacggacg gaatggcatg ctgtttacta
    17521 cgcatggcgt catcaacata aagaataaaa aatgggccac cgatttttcg cctatagacg
    17581 aaagtttacc gtgcacagta agtaaccatt acacgaaagc ttacctgcgc catctgtttg
    17641 tggctgacga attactcggt ctgcaactcg ccagtattca caacctggcg ttttacacct
    17701 ggatgctgcg ggaagcaaga aagcaaatgg ttgacggaaa ttttttaagt tggaaatcgt
    17761 cagccgttga gcaattcagg caaaggcttt aaacgttatc aacatattaa cctgcggcca
    17821 tatcatgtta tctataattt tgtttgatat tgcacgccac gtgaataaca gttttccgaa
    17881 tgtataatac tttttctctg ttcacccgca gctgatgaaa aaactcgact ggtatatact
    17941 caagaaattt ctcgtcacct ttttcttctg cgtgtttctt tttaccatta tagccgttgt
    18001 aatagatgtg agcgagaaga cagatgattt tgtaaaggct ggtctcagtt ttaaagacat
    18061 cgtcaacaaa tattacttag gattcattcc gtacatcgat gcactgttat ttccattatt
    18121 cgtgtttatt gctgtgatat ttttcacatc aaaaatggcc cttcgcagcg agatcattgc
    18181 catccttgca agcgggacca cttatggaag aatgttgcgg ccatattggt tgggcggaat
    18241 tttgcttgca ctgttgctgt tgttcgcgtc ttcattcgta attcccaaag ccaatgcgaa
    18301 aagaacggac ttcgaagcga aatatatcaa agtaaattca agctatgatc cgctcgtaaa
    18361 tcgcccttcg cgcaacatgt atttccggat cgattcattt acatatgccg gtatccgtaa
    18421 ttacgatacg acgacaaaat acggaggtcc gttttttatg catcgcatca atgacaatca
    18481 gcttacttac aacctgagag ctgaatcgct gcaatgggac actgcatcgc gtaaatggaa
    18541 actgaataac gttgttgaac gaacgatcaa tggtctgcac gaaaccgtaa aaagggaaaa
    18601 attgcttttg ttcaacttca attttaaacc ggcggacctt aaccaggatg aatatgcgaa
    18661 agacaaacta aacacaccgc agttgcatca ttacatagca gatcaacagt tgcgtggcac
    18721 agaaggattg aacaccctcg aagttgaaga gtacaggcga ttcgcgacac cattctcagt
    18781 gttagtgctc acgatgatag gtgcggtggt ggccagccgc aaagttcgtg gcggcagcgg
    18841 cgctcatctc gcgattggtt ttgtgaccgc tgcaatattc attctgatgg accgattctc
    18901 cactatcttt tcaacaaaaa gcagtttccc tcctttgatc gcagcctggt tgccaaacct
    18961 gatctttact ttcgtcgcca tttattttta taggaaagct cccaaataaa cccataatta
    19021 ttcttttcgc accaggctga aataattttt tcgcgatata acttatggta tctttaagcg
    19081 cctgaatatc taaagtttta ttgagcaata ttgcaccgtt tggacacaca tgtattcagc
    19141 accgcgaaca acattcgcac attatactga tcaagattcc aaaatctttc tgccaaaaaa
    19201 ataactcatg ggcgtattaa aagacaggtt cagggaaaaa gctgacagtg ccgcagctga
    19261 gatcaaagag ctgctgcagg caaatggcaa caaggtgatc ggcgacgtaa agttggcgca
    19321 ggtgtaccag ggcatgcggg gtatcaccgg ccttgttaca gagacgagtt tactggatcc
    19381 acaggaaggg attcgttttc gcggatattc gatacctgaa ttacgtgaga agttgccgaa
    19441 ggcaaacgat ggcaccgagc cattaccgga aggtctcttt caccttttgc tgatcggcga
    19501 attaccaaca aacgatgaag cgaatcatat tacttctgtt ttgcagcgcc gcagccacgt
    19561 acctacccat gtattcgcaa cgatcgacgc cctaccgtta aatgcgcatc cgatgacgat
    19621 gttcgttacc gctgtgatgg ctttacaaac tgaaagcaat tttgcgaaac gctatgcaga
    19681 aggaatgagc aagaaagatc actggtcagc aatatttgac gattcaatgg acctgatcgc
    19741 aaggttgccg cgcatcgccg cttacatata tagaagaaaa tacaaagaga atgctcacat
    19801 tcaaccaaac ggtcttcttg actgggcagg caatcttgcg cacatgatgg gatttgaaga
    19861 cgaaagtttt aaagagctga tgcgattata catgacgatc cattctgatc atgaaggtgg
    19921 aaatgtttcg gcacatacaa cgcatctcgt tggatctgct ttaagtgatc catatttgag
    19981 ctacgccgca ggcatgaatg gattggcagg tccattgcat gggctcgcaa accaggaagt
    20041 gatcaagtgg atatttgaaa tgcaggacga attgggtacc aaaacgccat caaaagaaca
    20101 gatcggtgaa tatgtacgga aaacattgca gcagggaaaa gttgtaccgg gatatggtca
    20161 tgctgtactg cgcaaaaccg atccgcgatt taccgcacaa atggaatttg gaaaaaaaca
    20221 tatgcccgac gacccgctag tgcaaacggt ctggaacgtt tacgaggccg tgcctcctat
    20281 tttgcaaagt ttgggcaaga tcaaaaatcc atggccaaat gtggacgcac acagcggcgc
    20341 attgcttgtt cattacggtt tggttgaata cgaattttat accgttttgt ttgcagtgag
    20401 tcgcgcgctc ggtgtgttag cgagcctgtg ctgggataga gctctcggct tcccaattga
    20461 acgcccaaaa tcggtaacaa cagaatctgt gaaattgtgg ctgcagggta aagacgaaat
    20521 ttgggaagga tagttcagtc ttcattcatt cgtttcaaga cattcgaata acgctttaca
    20581 tcagctaatg gatttatcgg cttgcctgtc gtcagatatt ctgtcatttc tttcgcaaac
    20641 cacggagcca aagaacatcc tttagaaccc atcccattta aaattccgac attgtcgcag
    20701 tgcggatgaa tacccacaaa aggccttcgt tcgacagccg cgggccgtat ggcagctaca
    20761 tgcccggtaa cagcaaattc agctttcaaa attgatgtga ggatcgaaac tgttttcgtt
    20821 ttataatctt cagttggtaa ttcattgtca aattgcaatt cattactgct gccaacccac
    20881 cagagatcgt tcgtccatgg tatcatcgtg agatggccaa acttgtacat gaagtcgcgc
    20941 ggtatttttg ttgagtttac gatcaaagct tgtcctttat tgccgacaaa agggaggtta
    21001 caccagtatt ttccagaggc cgcctctatt ccgttacaat aaataatctt tttagcgata
    21061 acatttttgt actgcacacg atcgccgttc aaagccaact tttcttcttc aaattcatct
    21121 tccataaaag cgtcgcgaat tcgcaaatgg tctttccacg cgccgataaa gcgttgcaca
    21181 tcgattagaa aacatggggc gatctccata acgtcgaatg gaaagttgaa atattcgcgc
    21241 agcgattcct tacttacgga agag
//
LOCUS       DASQJI010000004        20674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1382593,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000004 DASQJI010000000
VERSION     DASQJI010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 20674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20674
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382593"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VEV83_00235"
     CDS             complement(<1..310)
                     /locus_tag="VEV83_00235"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYK43562.1"
                     /translation="MDTSTYFDSIYRNAKFNGILIMDHSGIIQEINHAFNIRFGYTNE
                     DLAGKNFAVLFTEEDQLKNRPESEIDRTIAEGSANDENYLVHKDGNKIWVTGESVLVS
                     G"
     gene            complement(544..3333)
                     /gene="clpB"
                     /locus_tag="VEV83_00240"
     CDS             complement(544..3333)
                     /gene="clpB"
                     /locus_tag="VEV83_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HYK43563.1"
                     /translation="MLNGTAFQAVKFEINAIISNEVLLDYFLQDKSDFMAVDQPIFIL
                     IIKNNALNLGAYKNMNLGNFTIKAAEAVQQAQQLAFNNGNPNIETEHFLKALLDQQDS
                     PVEYLLKKNNVTLNLLENKLDEAMRKLPKTNGEAAQSISREANNAVLRAGAVLKQFDD
                     EFVTPEHLLLAILKGSDSTAKLLKDAGLTEKGLVTAITDLRKGETVTSQTQSQEFNAL
                     NKYARNLNEMARQGKLDPVIGRDEEIRRTLHILSRRTKNNPILVGEPGVGKTAIAEGI
                     AHRIVNGDVPENLKSKIIYALDMGQLIAGAKYKGEFEERLKAVVKEVSTSEGEIILFI
                     DEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQKFFEKDKALERRFQK
                     VLIDEPTADDAISILRGLKDRYETHHHVRIKDEAIVAAVELSQRYITDRFLPDKAIDL
                     IDESAAKLRLEMNSMPEELDQLERQIRQLEIEREAIKRENDEEKLRTLGVEISNLSVE
                     RDTLRAKWQQEKELVDKIQNAKAAIEDLKQEAEQAERNGDYGKVAEIRYGKIKEQEKG
                     IESLTVQLDELSQHGRRLMKEEVDAEDIAENVAKATGIPVTRMMQSEREKLLHLEEHL
                     HERVVGQDEAITAVADAIRRSRAGLQDPKKPIGSFIFLGTTGVGKTELAKALAEYLFD
                     DESMMTRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKA
                     NPDVWNVLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNIGSALIQDAFQDVNENNLEDV
                     VDRTRMDVMSLLRQTIRPEFLNRVDEIIMFQPLLKKEIRNIVRIQLNALKKTLEGSHI
                     ELTFTDYLLDYLADNGYDPQFGARPLKRLIQKQIVNQLSKKILAGEIDRSNPVLIDVF
                     GNTVVFRNEVAEKVK"
     gene            3445..3729
                     /locus_tag="VEV83_00245"
     CDS             3445..3729
                     /locus_tag="VEV83_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43564.1"
                     /translation="MFISICLGIGIAGYHYLADIPWLDSLHNASMILSGMGPVVAINT
                     VAGKLFSSFYAIFSGVAFISSISFLLAPAVHRFFHRLHLEESDGLDDKKN"
     gene            complement(3726..5627)
                     /locus_tag="VEV83_00250"
     CDS             complement(3726..5627)
                     /locus_tag="VEV83_00250"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK43565.1"
                     /translation="MKNILFFVLASYICASATAQNYNALLIPDSLTKHANVVGRFEEL
                     HIIIKDIDKAIIRHKYARTILNEAGNKYAPYINDYSRLVDLSDIDGNLYDALGKKLKN
                     VKKKDIADFSDDDEALATDSRLKAHNFFYFQYPYTVEYEDEQHYNGIFYLPRWQPERY
                     ENFSVQESILIVETPVDYKLRYKQANYPGEPVITQDKDKMIYTWRVKNQPARYVQPYS
                     PPWEETITSVLVAPTQFSIQGFAGSMDTWQNFGTFCQALAAGRDELDDATKKKVHEIT
                     DTIKDQRRKIAALYKYLQQNTRYINIQFGIGGWQPFDAKYVAQKKYGDCKALSNFMGA
                     LLKEAGINSYYTVIKAGENKTFFWPDFPSTQFNHAIRCVPLGEDTMWLECTSETLPAG
                     YLGDFTCNRPALLITETGGKLVRTPYYSENDNQYSRKIEATLNENGDLTANVATIYKG
                     LEYDDVHNHFHYLNKEDLKKYLNESFDVSSYEINDFKYDETNASIPSITEQISFLSNS
                     YAHVSGKRLFITPNIVEHNPIKLDTSEKRTVDIYYPYSFQHTDTFYIAIPAGYTVESV
                     PKNMTVSNKFGSYEATYAVSDDKISYTRLYKRVLGRFPASDYPEFVKFYNDMYKADRS
                     QVVLVKKTN"
     gene            complement(5630..7654)
                     /locus_tag="VEV83_00255"
     CDS             complement(5630..7654)
                     /locus_tag="VEV83_00255"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3858 domain-containing protein"
                     /protein_id="HYK43566.1"
                     /translation="MNCRTFCIMMFAVITSPIFSQDKSAVKFGKVSAADFDIPRNPII
                     DSSDGAVIIADIGSTTFVGNYKGWFNQLYKRSTRIKILNDNGFDLATVKIRLYTSSQS
                     KENLKDLTATTYYIENGKVMSRTISKGDIYEEKLDKNHIEKRFTLPAVSTGCIIEYSY
                     SIESDFDFHLRSWTFQSEQYPCLWSEYKVSVPELLSYAAINQGSDPFFLKEVTEERAN
                     YRVTEPPNSSAYGASGQELNVDTYNNIFRWAMKDVRPLKQQDFVSTVKNYVDKIDFQL
                     RSWSNGQNVIMVRSTWQDIAKELLNTEYSEILNFSSSEHADWYANNVTAFIKNDSDTL
                     QAAKQIYYRVQKLFNCTSHNGIFVNSKLNQILKNTSGSAAEINLLLTALLRTKGIDAE
                     PLILSTRENGFMDLHYPVAEQANYVICKAIINGKILYMDASVRVLGFGTLPYECYNGY
                     AREISFLHADSIYLSANSLQEQNVTSVLLVSNEQGVSGMYNSTFGTYGSIDLRKKLKE
                     KSFAEFEKEFKLSGENVSMQNLSADSLDDPESTVSLKSNVSLPQYKEDIIYFKPVISS
                     LFNSNPLSATARSYPIEMPYCFDNTYILDMEVPKGYKVEELPKQAKASLSRNDGSFEY
                     LIQQNGNRIQLRCRTKLNKAIFSTNEYESLRNFFDLVVQKQAEQIVFKKI"
     gene            complement(7676..9631)
                     /locus_tag="VEV83_00260"
     CDS             complement(7676..9631)
                     /locus_tag="VEV83_00260"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3858 domain-containing protein"
                     /protein_id="HYK43567.1"
                     /translation="MFFNRFTAIICGIVISVAATAQVKLDKLKFGDIKPEDFKSDYYS
                     IDSSADAVYLDNMASARYDPGNGLTISYKVHRRIRLLHKKSFDDLATVKIPLYQHGYK
                     EDYVQNLQAATYTYEGGKVVTTKLDKASIFKDKDGDDKIEKFTFPDLKEGCIIEYSYT
                     KVSEFSSLPRWNFQSDYPELWTEYTVETPEYLDFVVLSKGFLTPVFDTVIKSYQAFIQ
                     GNMIEHTWAYKDVPALKEESYVTNLSNYRQSIEFQISAVRFPGRETQYFMHTWYQTVD
                     ELMKDEDFGEELSKENGWLKDDVKAVTAGRTDAVGKAKAIYESIRDNYTCIDDEAIYL
                     SQPLKKTQQTKKGTVADINLLLIAMLKVAGLDVSPVLLSTRGNGKTIDEYPIMSKFNY
                     VIARLQIDNTSYLLDASDPVLGFGHLGEDCYNGSARIIASDPLILNLSADSLRDAEVT
                     SLLLINGEEGKVSGSYKSIMGQIHSADMRDKMRKSNPDDYFKELKKNFGIEAEISGAT
                     IDSLKQFDMPVSVQYNVSFKPEDDIWYFNPLIGADLYKENPFSAAERSYPVEMPYCMD
                     KTYILSMQIPAGYQLDELPKQAKVTLNENEGSFEYLVQQAGDRIQLRTRIKLNKANFA
                     PQDYETLRNFFAFIVQKQAEQIVFKKS"
     gene            complement(9715..11688)
                     /locus_tag="VEV83_00265"
     CDS             complement(9715..11688)
                     /locus_tag="VEV83_00265"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3858 domain-containing protein"
                     /protein_id="HYK43568.1"
                     /translation="MHSLQAQDADYKFGNVSAKDFDVSAYSIVDDNASAVTLYEAGKT
                     HFIGNKRSWFSYVFTCTRKIKIRDKRAFDAATVEIELYKKDDDEEQLSDLKAVTYNLN
                     NGAISTSKLAKDGVFSERPDKNHIIKKFTLPGVQEGSIIEYTYTITSGFVFSIPSWQF
                     QNANFPALWSEYEVSIPSALIYISSMQGNDSFYIQKSWQGKQTYRVTQAADKNILGMQ
                     DRELAVTAVTNNFKWVKTNVPALKTEEYVSSLNNYVDKIEFQLSSTDNGEETSQVMNT
                     WKSVSEDFLKDDDFQQALSHDNAWIRDLDNHSPGETDLNIAKKIYYYVQANYMCTESS
                     TIFKYEDLSTVYKKQRGTVRGVNLLLIAMLNDQGVDAKPVLLSTRDHGFINPNYPILD
                     KFNYLICRATLSNGISFLLDATVPHLAFGELSNKCYNGYARIIDLAGGDAVFLSTDSL
                     KESSQTSLFLSNSDDGKISGTYKCLMGKTESMDMRAQMSKSNTGEYLKEIKQFFGTET
                     EISNLVIDSLSEPGMPVSVQCDISFSSEGDIFYVTPLMGQDVYRENPFKAARRSYPVE
                     MPYRIDKTYIFNMEVPAGYKVEELPKSAKIALNGDEGSFEYLIQQSGNMVQLRCVTKL
                     NRANFEPDDYETLRNFFTVVVAKQNEQIVFKKE"
     gene            complement(11826..13856)
                     /locus_tag="VEV83_00270"
     CDS             complement(11826..13856)
                     /locus_tag="VEV83_00270"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3858 domain-containing protein"
                     /protein_id="HYK43569.1"
                     /translation="MREFLKDQNMFFNRLTALFPGVVICCASFCQVTKPDIKFGDLTP
                     EDFAASYYSIDSSADAIYLYDAGSSHFESGAIGGVFLVYTEHKRIRLLHKNGFNVAST
                     KIYLFDHGSTSDELEDLQAATYTLENGKITVSKVDKTSIFKTKQGNIQSVTFTFPNLT
                     EGCIVEYSYKETIPTYSYIPAWSFQNSFPHLWSEYSVEVPQFLDFVTLNQGYIEPVLD
                     TGSTAASDFTFVVRDYRGGTRLNTFRSTTVKHTWAFQNVPAVKEESYITNLSNYIEQI
                     EFQLQAIRIPGEQPKFFMNDWNETSKQLMKEENFGYELTKENHYLKDAIQLATAGSAD
                     QFDKARRIFDFVRQNYFCFNHSAISLSQPLRKTYDTKRGNVADINILLLAMLRYAGFT
                     ADPVLLSTRQNGKTYDVYPILSKYNYVIVKIEFDDQFYLLDASDNKIAFGFLPPACFN
                     DNGIVIAQPSSEINLSSDSLDEQSLVSVFLTNDSNGISGSCKTVLGTVESYNVRNKLV
                     TSSKDEYLKELFTKGSFDINVSDPTIDSLQQLQYPVSTQYNINFNLTGDLFYFNPMFA
                     DPRKENPFHAANRSFPVEMPYCMDKTYVLNMQIPEGYYVEELPKPARATLNDNEGMFE
                     YIIEQSNDRLQLQCRVKLNKANFESNDYQTLRNFFTIIVDKENEQIVFKKQQ"
     gene            13896..14837
                     /gene="queG"
                     /locus_tag="VEV83_00275"
     CDS             13896..14837
                     /gene="queG"
                     /locus_tag="VEV83_00275"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HYK43570.1"
                     /translation="MNSITKHTRFIKSSAAQLGFHDCWIAKAVKLDDDARRLESWLHK
                     GFHGKMQYMENYFELRIDPTKLVPGANSVITLLLNYFPAETQHPEAPRISKYAYGNDY
                     HEVIRGKLNELLHQVRTTIGEVHGRGFVDSAPVLERSWAVRSGAGWVGKNGNLINKTA
                     GSYFFIATLIVDLELLYDDPFAKDHCGSCTRCIDSCPTAAILDNKVIDGSRCISYFTI
                     ELKDALLPGEMKNKFENWAFGCDICQDVCPWNRFSKPTPEIAFKPLPEILNLKTAEWE
                     NMSEQSFKKIFAHSPLKRAKFEGIQRNLKFLQNASVV"
     gene            complement(14842..16206)
                     /locus_tag="VEV83_00280"
     CDS             complement(14842..16206)
                     /locus_tag="VEV83_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43571.1"
                     /translation="MQENEFEKRVRKLMDDFQVSPSASVWEQVQARIMQRRRKWPLVL
                     FLLLSMLGTGYLIYHQFHENPPGIVQAKGKTTRPEDLKSKDDRQGSQEQNAVKENNLQ
                     QNIVIKTEKPTANRSAHESAVSQNVHQQNVGTEEARSPEVKEEDHLLENHFPTSNPAT
                     SEQQSVDSNSINQQKTDSVSAPKTDTVSRRIAAADSNSEHTTPIQNAKVPEKNSAGKW
                     SIGITAFAGKSNTIEQLFGNSKTYPSANYVNDTLAPGTTHPDKPFTASGSYEAGIFVQ
                     RKISEKNSITLAINYLHFSNEAEVSNSNSSFILAVAGPAGVEYVNNYYMPAAPEDKMR
                     VKNKYDFLSVGAQFHQLIINSKKTPLYGSAGLSALRLLSANTLIYDNKTNTYYHKDEW
                     LSKWQGSFNAAVTLHINLNHNNYLFVGPQMSYGFTNLLNNKNYVPQHLFNYGVQVGWA
                     IGKK"
     gene            complement(16187..16720)
                     /locus_tag="VEV83_00285"
     CDS             complement(16187..16720)
                     /locus_tag="VEV83_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK43572.1"
                     /translation="MKHIPEAQWELYNHFAPAMMGVCYRYTKTHSNAEDVLQEGFVKV
                     FNNLSQYRFEGDLAAWIRRIMVNTALTYLKKHKQYAEDLAFDEIKLHPVSPENPQLLL
                     QAKEIADLIRQLPTGYQTIFNLHAVEGFTHVQIGEMLGIDTGTSRSQYARARALLMTW
                     IQNVETVKENFYAGKRI"
     gene            complement(16891..17097)
                     /locus_tag="VEV83_00290"
     CDS             complement(16891..17097)
                     /locus_tag="VEV83_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43573.1"
                     /translation="MSTTRDTSDDASGCDLSLRRDDGSNGLDDESNGLNHVPSCGRQE
                     TSLIIHPVEISRRVEMTGAMVSIT"
     gene            17145..18416
                     /gene="bioA"
                     /locus_tag="VEV83_00295"
     CDS             17145..18416
                     /gene="bioA"
                     /locus_tag="VEV83_00295"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HYK43574.1"
                     /translation="MSLLSRDQKFVWHPFTPQKNMPEPLAITSAKGSLLFDEEGNQYI
                     DAISSWWVNIHGHAHPYIAEKIYRQALQLEHIIFAGFTHQPAVDLAEKLLALLPLNFS
                     KIFYSDDGSTSTEVAIKMALQYWWNQHEHQTSGQKRNKILAFNNAYHGDTFGAMSVSD
                     RSVFTAAFQELLFDVIFIDTPSEENITTSKKIIEDNAKEIAAFIYEPLVQGAGGMKMY
                     NPILLDELLLFIKQKNIICIADEVMTGFGRTGKMFASEYMQTKPDIICLSKGLTAGTM
                     ALGVTGCSEDIYRAYISDDVQKTFFHGHSFTANPLACSAALANLELFKSENTLERVHH
                     ISEQNIAFAKQLRQLNGIKNVRTTGTILAFELMNGKDEYVNNISQVVTKKCLEKGVYL
                     RPLGNTVYIMPPYCITTEELETIYSVILDVI"
     gene            complement(18417..18920)
                     /locus_tag="VEV83_00300"
     CDS             complement(18417..18920)
                     /locus_tag="VEV83_00300"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYK43575.1"
                     /translation="MRFLKFVIISLTFLFILLTAIGLLMPSSVTVGRSVEINAPIDSI
                     RTYTNDLENWKLWLNGADTAFYKQLTPGTRDKDSKIKLGTYMITVIKNDTKYMITLWQ
                     GEHTREQVNRIELYYNGSTTTVNWSFEQQLKWYPWERLSAMLHDKVFGPSMEVSLNKL
                     KQVAEKS"
     gene            complement(19151..>20674)
                     /locus_tag="VEV83_00305"
     CDS             complement(19151..>20674)
                     /locus_tag="VEV83_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HYK43576.1"
                     /translation="FGLPIAMVILSITFVPAFGRLKVFTPYEFLEQRFGIKTRAFTSF
                     LFLLSRGFSTGISVYAPSIILSTLFGWNIFYTNILMGGILIIYTVTGGAKAVAYTQQL
                     QLVIIVTAMCIAGYFIVHAMPANVSLTDALHVSGASGRLNIITTGVGENGFAWKDKYN
                     IINGVIGGLFLALSYFGTDQSQVGRYLTAKNTTQSRLGLLINGLVKVPMQFLIFLLGA
                     LLFVYYQFSSAPIFFNKTAEEKVYAAPYNDSLRDITAAFNSVNAEQKNVAAEYISSVH
                     GNDTAQIASTKSQLQALNTKANDLRIQYKTVLHRADPSVDTNDTNYIFLRFVIDHLPE
                     GLVGLLIAVIFLASWGSIAAALNALASCTMVDFYLRFTKHHAHPSKKDWEEERKYRIS
                     RWFTLGWGIFCIIIAEFASRMGSLIEAVNKYGSIFYGVILGIFLVAFYFKNIKGNAVF
                     LSAVISEILVIVLFVLDSNNIIGLAFLWLNVIGALAVIAIGWLIQKASPTEAGLKYS"
BASE COUNT         5478 a         4621 c         4316 g         6259 t
ORIGIN      
        1 tgccggaaac caaaaccgat tcacctgtta cccagatctt gttgccatct ttatgaacga
       61 gataattttc atcgtttgca gaaccttccg caatcgttct gtcaatttca ctttccggtc
      121 gatttttaag ttgatcttcc tcggtgaaca ggacggcgaa gttctttcct gcgagatctt
      181 cattcgtgta accaaagcga atattgaacg catgattgat ctcctggatg atgccggagt
      241 ggtccatgat aagaatcccg ttgaattttg cgttcctgta aatagagtca aagtaggtag
      301 aggtgtccaa tgtaaagttt ttagattagc gaacaacagg cataccgacg aagtgtggtg
      361 ccgacacttc attaaaatat ttttttgcct gctgatacga aacaaacaaa gtaccaaaat
      421 ttacttgaca taataaaaac gccccaccgc tttcttttta actcacgtca aaaatggtta
      481 cgctcatatg aaatgaaaaa gtcccgctta ctgtgcggga cttccatgcg atctatgcag
      541 gtactatttt actttttcag ccacttcgtt tctaaagaca accgtgttac caaaaacatc
      601 gatcaaaacc gggtttgatc tgtcgatctc accggcaagt attttcttgc taagctggtt
      661 cacgatctgc ttttgaataa ggcgctttaa aggccttgct ccgaactgcg gatcatagcc
      721 gttatcagcg agatagtcga gcaaataatc tgtgaaagtc agttcgatat ggcttccttc
      781 cagcgtcttt ttgagtgcat tcaactggat gcgtacgatg tttcgaattt cttttttcaa
      841 aagcggctgg aacatgatga tctcatcaac ccggtttaaa aattcaggcc ggatcgtttg
      901 ccgcaggaga ctcattacat ccatcctcgt gcgatcaaca acatcttcga ggttgttttc
      961 atttacatcc tggaatgcat cttgtatcaa tgcgctccca atattgctcg tcatgatgat
     1021 aatggtattc ttgaagttca ccacgcggcc cttgttatcg gtgagccttc cgtcatccag
     1081 tacctgcaac agcacgttcc atacatccgg atttgccttt tctatttcat caagtaatac
     1141 aacgctgtac ggtttgcggc gcacggcttc ggtgagctgg ccgccttcgt catagcctac
     1201 atatcccgga ggtgcaccca ccaaacgtga gaccgtatgt ttttcctggt actcactcat
     1261 gtcaatcctt gtcatcatgc tttcgtcatc aaacaaatat tcagcgagag cttttgcaag
     1321 ctctgtttta ccaacacctg ttgtgccgag aaatataaat gaaccaatag gtttttttgg
     1381 atcctgcaaa ccggcacggc ttcttcgtat tgcatctgcg acagcggtga tggcctcatc
     1441 ttgtccaacc accctttcgt ggagatgctc ctcaaggtgc aataattttt cgcgttcact
     1501 ttgcatcata cgcgtcaccg gaatgcctgt cgcctttgca acgttttcgg caatatcttc
     1561 tgcatcaact tcctctttca tcaaacgccg tccgtgttgg ctaagctcat ccaactgaac
     1621 tgtcaggctt tcaatacctt tttcctgttc ttttatttta ccatagcgga tctccgccac
     1681 tttaccgtag tctccgttgc gttctgcctg ttcagcttct tgtttcagat cttcgatcgc
     1741 tgcttttgca ttttgtattt tgtcaacaag ctctttttcc tgttgccatt tcgcccgtaa
     1801 tgtgtcacgc tcaacactga ggttgctgat ctcaactcct aacgtcctaa gtttttcttc
     1861 atcattctcg cgttttatcg cttcacgttc aatttcaagt tgcctgatct gtcgttccaa
     1921 ctggtcaagt tcttcaggca ttgaattcat ttcaaggcga agttttgctg cactttcatc
     1981 tatcaaatcg atcgccttat cgggtaaaaa tctgtcagtg atatagcgct gtgaaagttc
     2041 aaccgcggca acgatcgctt cgtcttttat gcgtacgtgg tggtgcgttt cataacgatc
     2101 tttcaatccc ctcaaaatag agatcgcatc gtcagccgtt ggttcatcga tcagtacctt
     2161 ctgaaaacgg cgttcgagcg ctttgtcttt ttcaaagaat ttttgatact cattcaaagt
     2221 ggtagcgccg atcgcacgga gctcgcctct tgccaatgca ggcttcaata tgttggctgc
     2281 gtccattgcg ccttcgccac caccagcacc aacgagcgtg tgtatttcgt caatgaaaag
     2341 aatgatctcg ccttcgcttg tgctcacttc tttcacaacg gctttcagtc tttcctcaaa
     2401 ctcacccttg tacttggcgc cggcaattag ctgccccatg tcaagcgcat aaataatttt
     2461 tgacttcaaa ttttcaggca cgtcgccatt cacgatacga tgagcaattc cttctgcgat
     2521 cgcagtttta ccaacgccag gctcaccaac aagtatggga ttgttttttg ttctgcgcga
     2581 aagaatgtga agtgtccttc gtatttcttc atcacggcca atcacgggat cgagttttcc
     2641 ctggcgcgcc atctcattga gatttctcgc atacttgttc agcgcattaa attcctgcga
     2701 ttgcgtttgt gaagtaacgg tttcgccctt gcgcaaatcg gtgatggcag taaccaggcc
     2761 tttttccgta agccctgcgt ctttcaatag ttttgctgtg gaatcgctgc cttttaatat
     2821 tgccagcagc aaatgttccg gcgttacaaa ttcgtcgtcg aattgtttta atacggcacc
     2881 agcgcgcaga acagcgttgt tcgcttcacg gctgattgat tgagctgctt ccccatttgt
     2941 tttaggaagc ttacgcatcg cttcgtcgag tttattctca aggagattga gggtaacgtt
     3001 gttcttcttc agcaggtatt ctaccggcga atcctgttga tcgagcagtg cttttaagaa
     3061 atgctctgtt tcaatattcg gattgccatt gttgaacgca agttgttgcg cctgctgaac
     3121 agcttccgca gctttgatag tgaaatttcc aaggttcata ttcttatagg cccccaaatt
     3181 gagggcatta tttttaatga ttaaaatgaa tattggctga tcaacagcca taaaatcgct
     3241 cttatcctgc aaaaaataat ccaagaggac ttcgttagaa attatggcat tgatttcaaa
     3301 cttaactgcc tgaaatgcag ttccattaag catttgctgt aattttatca gtaacaacga
     3361 cgtatgtacg agaccacttc tcaaccgctt gcgcccaaaa gcgtttttta tagccgcctt
     3421 cgcaagaatt ttttttatat gtgtatgttc atttcaatct gcctggggat cggcattgcc
     3481 ggctatcatt atttggctga tattccgtgg ctggattcac tgcataacgc ctcgatgatc
     3541 ttaagcggaa tgggaccggt cgtggcgatc aacaccgttg cgggaaaatt gttttcttct
     3601 ttttatgcga tattcagcgg tgtggctttc atcagcagca taagttttct gctggcccct
     3661 gctgtgcatc gtttcttcca caggcttcac ctggaagagt cggacgggct tgatgataaa
     3721 aagaattagt ttgttttctt gactaaaaca acctggctgc ggtcggcttt gtacatgtcg
     3781 ttatagaact tcacaaattc ggggtaatcg gaagccggaa agcggccgag aacgcgtttg
     3841 tataatctcg tataagaaat tttgtcgtca cttaccgcgt aggtcgcctc gtaactgcca
     3901 aacttgtttg acaccgtcat attttttgga accgattcaa ctgtgtagcc ggctggaatg
     3961 gcaatataga acgtatccgt gtgctgaaaa gaatatggat aataaatatc aaccgttcgc
     4021 ttttcagaag tgtcgagctt gatcggattg tgctcaacga tgttaggtgt tataaataat
     4081 cttttccctg acacatgagc gtaagaattc gagaggaaac tgatctgttc tgttatggat
     4141 gggatcgatg cgtttgtttc gtcgtactta aaatcattga tttcataact ggagacatcg
     4201 aaactttcat tcaaatattt ttttagatcc tctttattga ggtagtgaaa atgattatgc
     4261 acatcgtcat attcgagtcc tttgtaaata gtggcaacat ttgcggttag atcgccattc
     4321 tcattcaggg ttgcttcaat ctttcgcgag tattggttat cgttttcaga ataatagggt
     4381 gttcgaacga gcttccctcc tgtttcagtt attaataagg ccggccggtt gcaggtaaaa
     4441 tctcccaggt aaccggcagg cagggtttca ctggtacatt caagccacat cgtgtcttca
     4501 cccaggggaa cacagcggat agcatggttg aactgcgttg aaggaaaatc gggccagaaa
     4561 aacgtcttgt tctcaccggc cttaataaca gtatagtaag agttgatgcc agcttcttta
     4621 agcaatgctc ccatgaaatt tgaaagcgct ttgcaatctc catatttttt ttgcgcaaca
     4681 tattttgcgt cgaagggttg ccagccacca atgccaaact ggatgttgat ataacgcgtg
     4741 ttctgttgca gatatttata caaagccgcg atcttccgcc tttgatcttt tatcgtgtcg
     4801 gtaatttcat gcactttctt tttagttgca tcatcgagtt catcacggcc tgctgcaaga
     4861 gcctggcaaa acgtcccaaa gttctgccac gtatccatgc tgccggcaaa tccctgtata
     4921 gaaaattgag taggcgctac caatacactc gtgatggttt cctcccacgg cggactgtaa
     4981 ggttgcacat accttgctgg ttggtttttt acgcgccagg tatagatcat tttatcctta
     5041 tcctgcgtga tgaccggctc acccggataa ttcgcctgtt tatatcttag cttatagtca
     5101 actggcgttt ccacgatgag tatgctttcc tgcacggaga aattctcata tcgctccggt
     5161 tgccagcgcg gcaaataaaa tatgccgttg tagtgctgct catcttcata ttccaccgtg
     5221 tacggatatt gaaaataaaa aaagttgtga gctttcaacc gcgagtccgt ggcaagagct
     5281 tcatcgtcat cggaaaaatc ggcaatgtct tttttcttta cgttcttcag tttttttccc
     5341 aaagcgtcgt agaggttccc atcgatgtca gaaaggtcaa ccaaacgcga gtaatcatta
     5401 atatatggcg catatttatt accggcttcg tttaagatgg tccttgcata tttatgcctg
     5461 atgatcgctt tatcaatgtc cttaatgata atgtgcaatt cttcaaaccg cccaaccaca
     5521 ttggcatgtt ttgtaagaga gtcgggaatt agcagcgcat tataattctg cgccgtggcc
     5581 gaagcacata tgtaactggc gagaacgaaa aataaaatgt ttttcatgtt catattttct
     5641 tgaagacaat ttgctctgcc tgtttttgca ccaccaggtc aaaaaaatta cgtaaggatt
     5701 catattcgtt tgtactgaat attgccttgt tcaattttgt acgacagcgc aactgaatac
     5761 gatttccgtt ttgttgaatt aaatattcaa aagacccgtc gttccggcta agagatgctt
     5821 ttgcctgttt tggcaattct tctactttat agcctttggg cacttccata tcaaggatgt
     5881 aggtattgtc gaaacagtaa ggcatttcaa taggatacga tctcgctgtt gcggatagcg
     5941 ggttgctgtt gaaaaggctg gagatgacag gcttgaaata aataatgtct tccttatatt
     6001 gcggtaggct aacattcgat ttcaaactaa cagttgattc cggatcgtct aacgagtcgg
     6061 cggaaaggtt ttgcattgaa acattttcgc cggaaagttt gaactctttc tcaaattctg
     6121 cgaaactttt ttcctttaat ttctttcgaa gatctatgga gccgtaagta ccgaatgttg
     6181 aattgtacat tccgcttact ccctgctcgt tactgaccag cagaacgctt gtgacattct
     6241 gttcctgtaa actgtttgcc gagagatata tagaatctgc atgcaagaaa cttatttctc
     6301 ttgcgtaacc gttgtaacac tcgtacggta acgtgccaaa accgagtacc cggaccgacg
     6361 catccatgta caatattttt ccattgataa tagccttgca aatcacataa tttgcctgct
     6421 cagctacggg ataatgcagg tccataaaac cattttccct tgtgcttaag atcaaaggct
     6481 cagcatcaat gccctttgtt cttagcaatg cagtcagcaa gaggttgatc tccgccgcgc
     6541 ttccagaagt gtttttaagt atttggttga gtttgctgtt tacaaatatt ccattatgac
     6601 tggtgcaatt aaataatttt tgaactctgt aatatatctg cttcgcggcc tgaagcgtat
     6661 cactgtcatt cttaataaat gcggttacat tgttggcata ccagtctgca tgctcactcg
     6721 aactaaaatt taagatctcc gaatactccg tattcaacag ctctttggca atgtcttgcc
     6781 acgtggatct gaccatgatc acattctggc catttgacca ggaccttaac tgaaaatcga
     6841 ttttgtcaac ataatttttc acggttgata caaaatcttg ctgtttaagc ggacgcacat
     6901 ctttcattgc ccagcgaaaa atgttgttat acgtatcaac attcagttcc tgtccagatg
     6961 ccccgtaagc agacgagttc ggaggctcgg tgacccgata gtttgcccgt tcttccgtca
     7021 cttcctttaa aaaaaatgga tcgctgccct ggttaattgc tgcataactt aacagctcag
     7081 gcaccgacac tttgtattca ctccaaagac atggatactg ttcactttga aatgtccagc
     7141 ttcgcaaatg aaagtcaaaa tctgactcaa ttgaataaga atattcaatg atgcatcctg
     7201 tcgaaactgc cggtagcgta aatctttttt ctatatgatt tttatcgagc ttctcttcat
     7261 aaatgtcacc cttactgatc gtccgggaca tcacttttcc attttcgatg tagtaggtgg
     7321 tcgccgtaag atcctttaga ttttctttgc tctggctgga ggtgtacaag cgaattttca
     7381 cggtcgcaag atcaaaaccg ttatcattga gaatttttat ccttgtactc cttttgtaca
     7441 actggttgaa ccatcccttg taatttccga caaacgttgt cgacccaatg tctgctatga
     7501 ttacagcgcc atcagaactg tcgatgatcg ggtttcgtgg aatgtcgaag tcggcagcac
     7561 taactttacc aaatttcacc gcgcttttgt cctgactgaa aatcggcgat gtgatcaccg
     7621 caaacatcat tatgcaaaaa gttcggcagt tcatggactc ggattatggg atcaattaac
     7681 ttttcttgaa cacgatctgt tccgcttgtt tttgcacaat aaaggcaaag aaatttcgaa
     7741 gtgtctcgta atcctgcggc gcgaaattcg ctttattaag tttgatgcgg gtgcgcagct
     7801 ggatgcggtc gccggcttgt tgaacaagat attcgaagct tccttcattt tcattcaaag
     7861 taacttttgc ttgtttaggc aattcatcga gctggtagcc ggccgggatc tgcatgctga
     7921 gaatatacgt cttgtccatg cagtagggca tttccacagg gtaagaacgt tcggcagcgc
     7981 taaacgggtt ttctttatac agatcagcgc cgatgagcgg attgaaatac caaatgtcat
     8041 cttccggctt aaacgaaaca ttgtattgca cagatactgg catatcaaat tgtttcaacg
     8101 agtcgatcgt ggcaccgctg atctcagcct cgatcccgaa atttttctta agctccttaa
     8161 aatagtcatc tggattcgat tttctcattt tgtcgcgcat gtccgccgag tgaatttgac
     8221 ccatgatgga tttgtaactg cccgacacct tcccttcttc tccattaatt aaaagcaaac
     8281 tggtaacttc cgcatcgcgc agcgagtccg cagataaatt gaggatcagc gggtctgaag
     8341 ctattatccg tgcgctgcca ttatagcaat cttcgcctaa atgcccgaaa cccaataccg
     8401 gatctgaagc atccaggaga tatgatgtat tatcaatctg cagccgggcg atcacgtaat
     8461 tgaatttgct catgatggga tactcatcaa tcgttttacc atttcctcgt gtgctcagga
     8521 ggaccgggct aacatctaaa ccggcaactt tcagcatcgc aataagcaac aggttaatgt
     8581 ctgcaacagt accctttttc gtttgttgtg ttttcttaag gggttgagac agatagatcg
     8641 cctcgtcatc tatacaagtg tagttgtcgc gtatagattc gtaaatcgct ttcgcttttc
     8701 caacagcatc tgttcgacct gcggtaaccg cttttacgtc atctttcaac cagccatttt
     8761 ctttgcttaa ttcttctccg aagtcttcat ccttcatcaa ttcgtccacc gtctggtacc
     8821 atgtatgcat gaaatactgt gtttccctgc ccggaaaacg aactgccgag atctggaact
     8881 ctatgctttg ccggtaattt gaaaggttag taacatacga ttcttccttg agagcaggaa
     8941 cgtctttgta agcccaggta tgctctatca tgttgccctg aatgaatgcc tggtacgatt
     9001 tgataaccgt atcaaagacg ggcgtgagaa agcctttgct cagaactaca aaatctaaat
     9061 attcgggcgt ttccaccgtg tactcggtcc acagttcggg atagtcgctc tgaaaattcc
     9121 agcggggcaa acttgaaaat tcagagacct ttgtatagct gtattcgatt atgcaccctt
     9181 ctttaagatc cggaaaagtg aatttttcta ttttatcgtc tccatcttta tccttaaaaa
     9241 tggaagcttt gtcgagtttt gttgtgacca cttttccgcc ttcataagta taagtggctg
     9301 cctgcaggtt ctgtacataa tcttctttat agccatgttg atacagcggg atcttgacgg
     9361 tagccaggtc gtcaaagctt tttttgtgaa gcagccttat tcgccggtgt actttataac
     9421 ttatggtcag cccattaccg gggtcatatc gtgcggatgc catattatcc aaatacaccg
     9481 catctgcaga tgaatcaatg gagtaatagt cgcttttgaa atcttccggc ttgatatcgc
     9541 cgaatttgag cttatccagt ttaacttggg ctgttgcggc aacagagata acgataccac
     9601 aaatgattgc ggtgaagcgg ttgaaaaaca taagcagtag aattttaatg aacaataata
     9661 gcaaaaatta taataatcac gaaccgtttg cacagcagtt tgccgggtta tttgttactc
     9721 ctttttaaaa acgatctgtt cattctgttt tgcaaccaca accgtaaaga aattcctcaa
     9781 cgtctcataa tcgtccggct caaaattcgc cctgttcaat ttcgttacac aacgcagttg
     9841 caccatattt ccactttgtt gaatgagata ttcaaagctt ccttcatcgc cgtttaatgc
     9901 aattttagcc gacttgggta attcttctac cttgtaacct gccggcactt ccatgttgaa
     9961 aatatacgtt ttgtctatgc ggtaaggcat ttctacagga taagaacggc gtgccgcttt
    10021 aaaaggattt tcacggtaaa catcctgccc catgagtggt gttacgtaaa atatgtcacc
    10081 ctcagaggaa aatgaaatat cacattggac ggatacaggc attcccggtt ctgaaagaga
    10141 atcgatcact aagttgctta tttccgtttc agtaccaaaa aactgtttta tctctttcaa
    10201 atattcgccg gtgttcgatt tgctcatttg cgcacgcata tccatcgatt ccgttttacc
    10261 catcaaacat ttgtatgtgc cggaaatttt accatcatct gaattcgaca aaaacaagct
    10321 ggtttgcgat gactctttca gggaatctgt tgataaaaat accgcatctc ccccagccag
    10381 gtctatgatc ctcgcataac cgttgtaaca tttatttgaa agttcaccga acgcgaggtg
    10441 gggaacagtc gcatcaagca aaaaagaaat cccattgctc agtgttgccc ggcaaattaa
    10501 ataattgaac ttgtcgagaa tcgggtaatt gggattaata aaaccgtgat cccgcgtact
    10561 aagcaacact ggtttagcat cgacaccctg atcattcagc attgcgatca ataataaatt
    10621 aacaccgcga acagtgcccc tttgcttctt gtaaacagtc gataggtctt catatttgaa
    10681 aattgtcgaa gactctgtgc acatgtaatt tgcttgtaca taataatata tttttttggc
    10741 aatattcaag tctgtctctc cgggtgagtg attatctaaa tccctgatcc atgcgttatc
    10801 gtgagaaagt gcttgttgaa aatcgtcgtc ctttagaaag tcttccgaaa cagacttcca
    10861 tgtgttcatt acctggcttg tttcctcccc gttatccgta cttgaaagct ggaattcgat
    10921 cttatcgacg taattgttaa gggaggaaac atactcttcc gtttttaaag cggggacatt
    10981 tgttttcacc catttaaaat tattcgtaac tgcagttact gccagctcgc ggtcctgcat
    11041 tcccaaaata ttcttatctg ctgcttgcgt aacccggtac gtctgctttc cctgccacga
    11101 tttctgaatg taaaatgaat cgtttccctg catagatgat atatagatca acgcggaagg
    11161 aattgacacc tcgtattcac tccacagcgc cgggaagttc gcattttgaa attgccatga
    11221 aggtatactg aaaacaaaac cagaagttat ggtatatgtg tactctatta tcgagccttc
    11281 ctgtacgcct ggtaaagtaa atttctttat aatgtgattt ttatccgggc gttccgagaa
    11341 aacaccatct ttagcaagct tactggtaga aattgctcca ttatttaaat tgtaggtcac
    11401 cgccttcaag tctgacagct gttcttcatc gtcgtctttt ttatataatt cgatctcgac
    11461 ggttgctgca tcaaatgctc ttttatcccg gatctttatt ttccgtgtac acgtgaaaac
    11521 gtagctaaac cagcttcgct tgtttcctat aaaatgcgtt ttgcccgctt catataatgt
    11581 aaccgcactg gcattatcat ccacgatact atatgcggat acatcgaaat ctttagctga
    11641 tacatttccg aatttatagt cggcgtcctg ggcctgtaat gaatgcatgg ggaaaataat
    11701 catgcacgag gctattgcgg ccagtcggtt gaaaaacata agcaggtcat ttagaaaaac
    11761 aatagtagca attttttttg agccgtagaa tttttagaca ggcgcgctaa aagcgtcgtc
    11821 tcgcatcact gctgcttttt aaaaacgatc tgctcatttt ctttatcaac aatgatcgta
    11881 aagaagttgc gtaatgtttg ataatcattc gattcaaaat tcgccttatt caacttaacg
    11941 cggcattgga gttgcagcct gtcattactt tgttctatga tatattcgaa catgccttca
    12001 ttatcgttca acgttgctct tgccggtttc ggcagttctt ctacataata cccttcggga
    12061 atctgcatgt taagaacata cgtcttgtcc atgcaatagg gcatttcaac cgggaaagat
    12121 ctgtttgcag catgaaacgg gttttctttt cgtggatcgg caaacattgg gttgaagtag
    12181 aacagatcgc cagtcaggtt gaaattaata ttgtattgag tcgagaccgg atattgtagt
    12241 tgctgtagcg agtcaatagt cggatcgctg acgtttatat caaagctacc cttcgtgaac
    12301 agttctttca aatactcgtc tttagaggaa gtaactaatt tgtttcttac attatacgac
    12361 tccaccgttc caagaactgt cttgcagcta ccgctaatgc cattactgtc gttcgttaag
    12421 aatacgctga ccaaactttg ttcgtccaaa gaatcagagc tgagatttat ttcggatgat
    12481 ggctgtgcaa tcactattcc gttgtcgttg aagcacgcag gcggcaagaa accaaatgcg
    12541 atcttgttgt cagaggcgtc cagcaaatag aattggtcat caaattcaat ttttacgatc
    12601 acataattat acttactcag aatagggtaa acatcatacg tttttccatt ctgcctggta
    12661 ctgagtagta cgggatcagc agtgaagccg gcgtagcgga gcatcgccag cagcaagatg
    12721 ttgatatccg caacgttgcc gcgtttcgtg tcgtaagttt tcctgagtgg ctgcgataac
    12781 gaaatcgcgg aatgattaaa acagaaataa ttttgcctca caaaatcaaa gattcgccgc
    12841 gctttatcaa attgatctgc agaacctgcc gttgcaagct gtattgcgtc cttgagataa
    12901 tgattttctt tagtcagctc atagccaaaa ttctcctctt tcatcaattg tttggaggtt
    12961 tcgttccagt cattcatgaa aaatttcggt tgttctccag gaattcttat cgcctgtaat
    13021 tgaaactcta tttgttcaat gtagtttgac aagttcgtta tataactttc ttcttttacc
    13081 gctggaacgt tttggaatgc ccaggtatgt ttaactgtcg tacttctgaa agtattaagt
    13141 ctcgttccgc cccgatagtc acgaacaaca aatgtaaaat cgctcgcagc ggtgctgccg
    13201 gtatcgagca ccggttcaat atagccctgg tttaaagtca cgaaatcaag aaattgtgga
    13261 acttcaacgc tgtattcgct ccataagtgc gggaaagagt tttgaaatga ccaggccggt
    13321 atatagctgt acgtcggaat cgtttccttg taactatact caacgatgca cccttctgtt
    13381 aaattcggaa acgtaaatgt taccgattga atattgcctt gctttgtttt gaaaattgag
    13441 gtcttgtcta ctttactaac cgttatctta ccattttcca aagtataagt tgctgcctgc
    13501 agatcttcga gctcatcgga cgtgctgccg tggtcgaata aataaatttt tgtcgaagca
    13561 acattgaagc cgttcttatg aagtagcctg attcgcttat gttcagtgta gacaagaaaa
    13621 actccgccta tagccccgga ttcaaaatga gatgacccgg catcgtataa ataaattgcg
    13681 tctgcagagg aatcaatgga ataataagaa gctgcaaaat cttcaggcgt taaatcgccg
    13741 aactttatat caggtttggt aacctggcag aaagaagcgc agcatataac aacgccggga
    13801 aacaaagcag tcaggcggtt gaaaaacata ttttggtctt tgagaaattc acgcaatgct
    13861 acaaattttt tagaatacca gtttattttt gcggtttgaa ctcaataaca aaacataccc
    13921 gtttcattaa atcatcagcc gcccagcttg gcttccacga ttgttggatc gcgaaggccg
    13981 ttaaacttga cgacgatgcg cggcgcctgg aaagctggct tcacaaaggc tttcacggca
    14041 agatgcaata catggaaaat tattttgagc tgcgcataga cccaacgaaa ctcgtgcccg
    14101 gcgcaaatag tgtgatcacg ctattgctaa attattttcc ggcagaaacg caacatccgg
    14161 aagctccgcg aatttcaaag tatgcctacg gcaacgatta tcatgaagtg attcgcggaa
    14221 aactaaatga gcttcttcac caagtacgga caaccattgg cgaagtgcac ggtcgcggtt
    14281 ttgtcgacag cgctcctgtt cttgaacgaa gctgggcggt acgcagcggt gcaggatggg
    14341 taggcaagaa cggtaacctg atcaacaaaa ctgccggctc gtatttcttt attgcgactt
    14401 tgatcgtcga cctcgaatta ttgtacgacg atccgtttgc aaaagatcat tgcggcagtt
    14461 gcacaagatg catcgactcc tgccctactg ctgcgatact tgacaataaa gtgatcgatg
    14521 gcagtcgttg catttcatat ttcacgatcg agttgaaaga tgcactgctc ccaggtgaaa
    14581 tgaaaaataa atttgagaat tgggcatttg gctgcgacat ctgccaggat gtttgtccat
    14641 ggaaccggtt cagcaaaccg acaccggaaa ttgcttttaa accgctaccg gaaattctca
    14701 atttaaaaac agcggaatgg gaaaacatga gcgaacaatc attcaaaaaa atatttgctc
    14761 actcgccgct taaaagagca aaattcgaag ggatacaaag gaatttaaag ttcttacaaa
    14821 acgcaagtgt tgtatagtca attatttttt gccgatcgcc catcccacct gcactccata
    14881 attaaacaaa tgctgtggca cataattttt attgttgagt aaattggtaa acccgtaact
    14941 catttgcgga ccgacaaaca aataattatt gtgatttaag ttgatatgta gggtcacagc
    15001 ggcattaaat gatccctgcc acttgctcag ccactcgtcc ttgtgatagt acgtgttcgt
    15061 tttgttgtcg tagatcaacg tgttggccga caataaacgt aatgctgaca agcctgcact
    15121 tccatacagc ggtgtctttt tactatttat tattagctgg tgaaattgcg cgcccacgct
    15181 aagaaaatcg tatttatttt ttacgcgcat tttgtcttct ggggcagcag gcatgtaata
    15241 gttattcacg tattcaacgc ccgcaggacc ggcgacagcg agaataaaag atgaattgga
    15301 attactgacc tcggcctcgt ttgaaaagtg caggtaattt attgcaaggg tgatcgaatt
    15361 tttttcagag atctttcttt gaacaaatat ccccgcctcg tatgagccag aagccgtgaa
    15421 tggtttgtcg gggtgagttg taccaggcgc gagtgtatca ttgacataat tcgccgaggg
    15481 atatgttttg ctgttgccaa ataattgttc aatcgtgttg ctttttccgg caaaagcggt
    15541 aatgccaatg ctccatttgc ctgcactgtt tttctcaggc actttcgcgt tttgaattgg
    15601 agtcgtgtgt tcagagttac tgtctgctgc agctatacgc cgagacactg tatccgtttt
    15661 gggagcggaa acggaatcag ttttttgttg gttgattgaa ttgctatcaa ccgattgttg
    15721 ttcgcttgtt gcggggttgc ttgtgggaaa atgattttca agcaggtgat cttcctcttt
    15781 cacttccggc gaccgtgctt cttcagtgcc gacattctgt tgatgaacat tttgcgagac
    15841 agcactttca tgcgcagacc ggttcgctgt tggcttctcc gttttgatga caatattttg
    15901 ttgcagattg ttttccttta cagcattttg ttcctgcgag ccctgcctgt catctttgct
    15961 cttcagatct tctggcctcg tagtttttcc ttttgcctgt acaattccag gcggattttc
    16021 gtggaattgg tggtagatca aataaccggt tccaagcatc gatagcagta aaaatagaac
    16081 cagcggccat ttgcgccggc gttgcataat gcgggcctgc acctgctccc acacggaagc
    16141 agatggcgat acctggaaat cgtccatcag tttgcgaacc cgtttttcaa attcgttttc
    16201 ctgcataaaa attctctttt acagtttcaa cattttggat ccaggtcatt aacaatgccc
    16261 ttgctcttgc gtactgcgat cgcgaagtgc cggtgtctat tccaagcatc tcaccaattt
    16321 gtacatgagt aaaaccctct acggcatgca gattaaagat ggtttgatat cctgtcggta
    16381 attgccggat aaggtcggca atttctttcg cctgcagcaa gagttgagga ttttcaggtg
    16441 aaaccgggtg gagcttgatt tcgtcaaacg cgagatcttc cgcgtattgc ttgtgctttt
    16501 ttaaatacgt gagggctgta ttgaccatga tcctgcggat ccatgcagca aggtcgcctt
    16561 caaacctgta ttgagataaa ttgttgaaca cttttacaaa gccttcctgc aaaacgtctt
    16621 ccgcgttgct gtgcgttttg gtgtagcggt aacacacgcc catcatcgcc ggcgcaaaat
    16681 ggttgtacaa ctcccattgc gcttccggta tgtgtttcaa acagtctttt acaagctttc
    16741 tataatccac ctgtgcttat ctatttgtgc tgacaattaa agtaaatgaa ccgttgcata
    16801 gacaagggat tttttgacgc agctaatatt cccgccgtgc acatgaatgc gcgtcattcc
    16861 acgccatcct cctgtcatcg aggctatcgc tcacgtgatc gagaccatcg ctcccgtcat
    16921 ctcgacgcga cgagagatct caaccggatg gattatcagg gatgtctcct gtcgtccaca
    16981 tgacggcaca tgattcaaac cattgctttc atcatcgaga ccattgctcc cgtcatctcg
    17041 acgcaaggag agatcacaac cggatgcatc atcagaggtg tctcttgtcg tcgacatgac
    17101 ggcggcggta gcggcattgt gcgtacaacg actatttttg ttcaatgagt ctgctttcaa
    17161 gagatcaaaa gtttgtctgg caccctttca caccgcaaaa aaatatgccg gagccgctag
    17221 ctataacttc cgctaaagga agtttgttat ttgatgaaga gggcaaccaa tacattgacg
    17281 cgatcagcag ttggtgggta aatatccacg ggcacgcgca tccatacatc gctgaaaaga
    17341 tctaccggca ggcattgcaa ttggagcata taatatttgc cggttttacg catcaaccgg
    17401 ccgtcgatct tgcagaaaaa ttgttggctc tgctgccact gaacttctct aaaatttttt
    17461 acagcgacga tggctcaaca tcgacagaag tagccataaa aatggcgttg caatactggt
    17521 ggaaccagca tgaacatcaa acatcaggtc aaaaaagaaa caagatactt gcattcaaca
    17581 acgcctacca tggcgatact ttcggtgcga tgagtgttag cgaccggagt gttttcacgg
    17641 ccgctttcca agagctttta tttgatgtga tctttatcga cactccgtcg gaagaaaaca
    17701 tcaccacatc aaaaaaaata attgaagaca atgcaaagga gatcgcggct tttatttatg
    17761 agccactcgt gcagggcgcc ggaggtatga agatgtataa tccaatattg ctggatgaat
    17821 tgttgctgtt catcaaacag aaaaatatca tttgcattgc cgatgaagtg atgacgggtt
    17881 tcgggcggac aggaaaaatg tttgcgagtg aatacatgca aacaaagccg gacattattt
    17941 gcctgagcaa aggattaacc gcaggaacga tggcacttgg tgtcactggt tgttcggaag
    18001 atatttaccg cgcgtatatt agtgatgatg ttcaaaaaac tttttttcat ggccattcgt
    18061 ttaccgcgaa tccgcttgcg tgttctgcag cactggcgaa ccttgagctg ttcaaaagcg
    18121 aaaacacact cgaaagggtt catcatattt cagaacaaaa cattgcattt gcaaaacaac
    18181 tgagacagct aaatggaatt aaaaatgttc gcacaacagg cacaattctc gcctttgagc
    18241 ttatgaacgg gaaagatgaa tatgtaaaca acatcagcca ggtcgttaca aaaaaatgcc
    18301 ttgagaaagg tgtctactta agaccgcttg gaaataccgt ttatatcatg ccgccatatt
    18361 gcatcacaac agaggagttg gaaacaattt attcggtgat cctcgacgtg atctgatcaa
    18421 ctcttttctg caacctgttt tagtttattt aaactcacct ccatcgaagg accaaatact
    18481 ttgtcatgaa gcatggcaga caggcgttcc cacggatacc atttcaattg ctgctcaaaa
    18541 ctccagttga cggtagtagt tgaaccgttg taatacagtt cgatccggtt tacctgctct
    18601 cttgtgtgct cgccctgcca caacgtgatc atatactttg tgtcattttt gataacagtg
    18661 atcatgtatg tgcccagctt tatcttcgaa tctttgtctc tcgtaccagg cgttaattgt
    18721 ttgtagaaag ccgtgtctgc tccgttcagc caaagcttcc agttttccag gtcgtttgta
    18781 tatgttctta tgctgtcaat gggagcattg atttcaacag atcggccaac ggtcaccgag
    18841 gacggcatta aaagaccgat ggctgttaat aaaatgaata agaaagtaag acttatgata
    18901 acgaatttca gaaatctcat gtgttgaaaa taacgtgtgc aatgtaaagc aaatgacgaa
    18961 acactaactc aacagaatgt gtatctgcca gcacacatat ttggcttgct tctgaaacat
    19021 atgtattaat aattagggcg atgaaacaag tggatcctct aaaaattcag tggacaaaaa
    19081 agactaaaaa aaataattgc aggaatgaaa atactttatt agctttagtt ttgaaaagct
    19141 cttaacacaa ctaagagtac ttcaggccag cctcagtagg gctggccttt tgtatgagcc
    19201 agcctatagc aatcactgcc agcgctccta tcacatttaa ccacaaaaaa gcaagcccga
    19261 taatattgtt gctgtcaagc acaaacaaaa caatgacaag gatctctgaa attactgcag
    19321 acaaaaacac tgcgttgcct tttatgttct taaaataaaa tgcgacgagg aagatgccga
    19381 gtatcactcc gtaaaatatt gaaccgtatt tattcactgc ttcgatcaaa cttcccatgc
    19441 gacttgcaaa ttctgcaatg atgatgcaga agatccccca gccgagagta aaccatcttg
    19501 agatgcgata tttccgctcc tcctcccaat ctttttttga aggatgtgca tgatgctttg
    19561 taaaccgcag gtaaaaatcg accatcgtgc aacttgcgag cgcattcaat gctgccgcaa
    19621 ttgaacccca tgatgctaaa aagatcacag cgatcaacaa tcccacgagg ccttcaggca
    19681 aatggtcaat tacgaatcgt aaaaaaatat agttcgtgtc gtttgtgtcg acggacggat
    19741 ctgcgcgatg aagaactgtt ttgtattgga tgcgcagatc atttgccttt gtattcaacg
    19801 cctgcaattg cgatttcgtg gatgctattt gcgcggtgtc gttgccatgc accgatgaaa
    19861 tgtattccgc tgcaacattt ttttgctccg cgttgaccga attaaatgca gcagtaatat
    19921 ctcttagtga atcgttgtat ggcgcggcat acactttttc ctcggctgtc ttgttgaaaa
    19981 aaattggagc tgaagaaaac tggtaataca cgaacagcaa tgcaccaagc agaaagatca
    20041 ggaactgcat gggaactttt accaggccat ttatcaataa acccaaccgg ctttgcgttg
    20101 tattttttgc agtaagatat cttccgacct ggctttggtc ggtgccgaaa taacttaatg
    20161 ctaaaaacaa tccgccgatc accccgttaa taatgttgta tttatctttc caggcaaatc
    20221 cgttttcgcc gacgccggtt gttatgatgt tcaacctgcc cgaagcaccg ctcacatgga
    20281 gcgcatctgt taagcttaca ttcgcaggca tcgcatgaac aataaaatat ccggcaatac
    20341 acatcgcggt tacgatgatc accaactgga gttgctgtgt gtatgctacg gcttttgctc
    20401 cgccggtcac cgtgtaaata atgagaatac ctcccattaa aatattggta taaaaaatat
    20461 tccatccaaa aagcgtagat agaatgatcg acggcgcgta aacactgatg ccagttgaaa
    20521 acccacgtga taaaagaaac aggaaagaag tgaacgccct cgttttgata ccgaaccgct
    20581 gctcaagaaa ttcgtacggt gtaaatactt tcagtcttcc gaacgcaggc acaaatgtta
    20641 tagatagtat caccatcgcg atcggtaatc caaa
//
LOCUS       DASQJI010000005         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_523, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000005 DASQJI010000000
VERSION     DASQJI010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1623)
                     /locus_tag="VEV83_00310"
     CDS             complement(<1..1623)
                     /locus_tag="VEV83_00310"
                     /inference="COORDINATES: protein motif:HMM:NF028477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5127 domain-containing protein"
                     /protein_id="HYK43577.1"
                     /translation="MPLRHYRYFLGFLFLFFLGDAKSQVTKMPAYPLATHDPYFSIWS
                     FTDKLNESNTKHWTGKEQPLLGLIRVDDKVYNFMGVPAHPAQWIAPLSDQQPHACKYT
                     TEKPGNDWMNENFNDEVWAAATLPFGNKEANPSTEWNTKEIWVRRNFDVFDLNIEQLV
                     LSLRNDDDVEVYINGEKVYECNCWTPDYQQHDLPASFIKKLHRGTNLLAIHCINTGGN
                     AWLDAGIATRELIKNIAHAQQDALYVTATQTKYIFSCGKVNLEVDFLSPLLANDLDML
                     SRPVSFVTLAVTAKDSSIHEVNILLAESSNVANDKGSEFMKATSYQANDLNILKCGTD
                     AQPILEKKGDDVRIDWGYTYVAAPQQKQYETKITSMQDVTKDFLSNGLLTSRYTGSDV
                     MDKDMLLAVKTTLFTGTGSQNNRAMIMLGYDDVYSIQYFGQNLQAWWKKNFNSMEELL
                     QTSAQQYSNIISTCDAFDKQLYADATKAGGETYAKLCVMAYRQSLAAHKLVRGAKDEI
                     LFPQKENFSNGSIWTVDVTYPSAPLSLVYNPDL"
BASE COUNT          551 a          451 c          450 g          617 t
ORIGIN      
        1 cagatcggga ttatatacta atgaaagcgg agcggaaggg tacgttacat caactgtcca
       61 tatagaacca ttactgaaat tttctttttg aggaaagagg atctcgtctt tcgcgccgcg
      121 cacgagcttg tgtgcagcga gcgattgtcg atatgccatt acacaaagtt tcgcataggt
      181 ctcaccgccc gcctttgttg catccgcata cagttgtttg tcgaaggcat cacacgtgga
      241 aataatattt gaatattgtt gcgctgaagt ttgaagtagt tcctccatcg aattaaaatt
      301 tttcttccac caggcttgca gattttgtcc gaagtattga attgaataaa catcgtcata
      361 tccgagcatg atcattgcac gattattttg agaaccggtt ccagtgaaca gggttgtttt
      421 tacggctaac agcatatcct tatccattac atccgaacca gtatatcgtg atgtaagtaa
      481 tccgtttgat aaaaaatctt tagttacatc ctgcatcgaa gtgatcttcg tttcatattg
      541 tttttgttgc ggtgcggcaa catatgtgta tccccaatcg atgcgaacat catcgccttt
      601 cttttccagg attggttgcg catcggtacc gcatttaagt atgttgagat cgtttgcctg
      661 gtagctcgtt gccttcatga attcactgcc tttatcgtta gctacgtttg aactctcggc
      721 aagcaggatg ttcacttcgt gaatactgct gtcctttgcc gtaacggcaa gcgtgacaaa
      781 agaaaccggc cgtgaaagca tgtccaggtc atttgccagc aatggcgaaa gaaaatcgac
      841 ctcaagattt actttgccgc aactgaaaat atattttgtt tgtgtggcgg taacatacag
      901 cgcatcctgt tgtgcatgcg cgatattctt tattaactcg cgcgttgcaa tgcctgcatc
      961 gagccatgca tttccgccgg tgtttatgca gtggatagca agcaaattcg tgccgcgatg
     1021 taatttcttt atgaacgaag cgggcagatc atgttgttga taatccggcg tccagcaatt
     1081 gcattcgtaa actttttcgc cgttaatgta aacttctaca tcgtcatcat tgcgcagcga
     1141 taaaaccaat tgttcaatat tcagatcgaa tacatcaaag ttgcggcgga cccagatctc
     1201 ttttgtgttc cattcagtgg aagggttggc ctccttattg ccgaatggaa gggtggccgc
     1261 tgcccaaact tcatcattaa aattttcatt catccagtca ttgcccggct tttcagttgt
     1321 gtatttgcac gcatgcggct gttgatcact caggggggcg atccactgtg ccggatgtgc
     1381 gggtacgccc atgaaattgt agaccttgtc atcgactcta atcaaaccaa gtaatggctg
     1441 ttctttccct gtccaatgtt ttgtgtttga ctcatttagt ttatccgtaa atgaccaaat
     1501 gctgaaatat ggatcatggg tggcgagcgg gtaagcaggc atttttgtaa cctgcgattt
     1561 tgcatcaccg aggaaaaata aaaatagaaa tcccaaaaaa taacgatagt gtcttaaagg
     1621 cattgcgaaa tgagtttcac gcaaagtagc aaagaagcgc aaagaagcaa agaaatgagt
     1681 aatgagttat cagtgatcaa cgtactatgc agcgttgttg cacgagcatc agtcaataat
     1741 gtgaaacaac aacggtcaga cggtttcaaa ccgtctgacc gttacattta attcaaattt
     1801 gaaggttcta agtaacggcc agcattatta agcgtttaat cgttagaact tgcatgttaa
     1861 cctgcaactt gcaacctgca acatcaacct gcaacatgca accggtaact gggaaccgcg
     1921 aaactaatag ttcactttta tctccttcat cttcgtcggc agccaaacct gcatttcgtt
     1981 ttttcctcgg ttagcccaac tatagtaagg aattgctgtc accgtttttg caactgtgtg
     2041 caaactgttt ccgtcagccg caggttcga
//
LOCUS       DASQJI010000006         4691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2457880,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000006 DASQJI010000000
VERSION     DASQJI010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4691
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2457880"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VEV83_00315"
     CDS             complement(<1..474)
                     /locus_tag="VEV83_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HYK43578.1"
                     /translation="MRRTIRYYRIIWLKYDLPAGLSVFLVALPLCLGIALASGAPLYA
                     GLLSGMIGGLVVSFISGSQLAVSGPAAGLTTVVAASLVSLGDYRLFLLAVIVAGLLQV
                     ILGLLKLGAVAYYFPSAVIKGMLAAIGIILISKQIPIALGYDQPDFWTSGFVQLFS"
     gene            complement(568..1011)
                     /locus_tag="VEV83_00320"
     CDS             complement(568..1011)
                     /locus_tag="VEV83_00320"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HYK43579.1"
                     /translation="MNTSADHCEKLARMYLSAPINDIIYKGITIDISDGKAEVSLQID
                     PKFFHAANAIHGSVYFKMLDDAAFFAVNSIVTDVFVYTVSFNTQLLRPASAGIIRSIG
                     ELKFKSTNLFIADSNLYDEKNKLIGRGSGSFMRSKIELAENIGYK"
     gene            1187..2008
                     /gene="murQ"
                     /locus_tag="VEV83_00325"
     CDS             1187..2008
                     /gene="murQ"
                     /locus_tag="VEV83_00325"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HYK43580.1"
                     /translation="MQDFIPVTEQPSLYRHLEEMPVEEIIAHINEEDKTVASAVEKAL
                     PQIEKLIIAITDRMLAGGKLFYVGAGTSGRLGILDASECPPTYGVPYSLVQGIIAGGP
                     AAITRAAEFAEDDARQGWLDLKARGVSAHDFVVGIAASGTTPYVIGALKQCRKNGIDT
                     GCITCNEGTPLASVADYPVEVITGPEFVTGSTRMKSGTAQKMVLNMISTTVMIQLGRV
                     EDNRMVHMQLNNEKLVDRGVKMLMQKTGLDNYEQAKSILLKAGSIKKAIQSVSKT"
     gene            2060..3310
                     /locus_tag="VEV83_00330"
     CDS             2060..3310
                     /locus_tag="VEV83_00330"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK43581.1"
                     /translation="MKNKILPIVSLLLLLSTAINSFSQSRKFFAVTGEQFGSVNWIAF
                     RQIDMDGVAPVKTLYVPAADNEAVYDALTGQQLINASTEAVASASPAQPCGCLNKRMV
                     AAIAYDATNNRLYYTPMLGNQLRYLDLNSDHPKSYAVTTQLLKSFTNQPGEASVVTRM
                     VFAANGLGYALTNDNQHLIQFTTGKQTAITDLGKLTDAKTNGEHSINTQFKSWGGDLV
                     ADAKGSLYLFAMQRGVFQINLNSRVATYLGNIQNIPDDYTVNAAMVEKDGYVIVGSAT
                     NTSTYYRVDLNTMQAVELNKSTKQVYNVSDFANANLLFAKSTSQQSAVSLKTIDRSSV
                     TIYPNPAVSRNFVVQFSNFTNDKYVIQLNEMAGKSVLQKEVIISGSQTEKVQLPLSIT
                     SGTYLLKIVNSKGESVYTDKIIVN"
     gene            3924..>4691
                     /locus_tag="VEV83_00335"
     CDS             3924..>4691
                     /locus_tag="VEV83_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43582.1"
                     /translation="MKYLFVPFILIACSSIADAQNVDWFKGTWYGLKSFTDARIGIRV
                     LVRIEVDSVRGNRFSGRFIYMYPKDTLSRLIKTFDGSFKEKIISVNKSKELYLLDPRS
                     RSFWSNCSQCNETGSFYIKDTNLVFRITTANCGDSCNGESFFLRNLGSYDSSTEIAVR
                     NFVSNEKPAPTAKTSSKQKKEAKSTSIPVKNRDNDTLASLNIDSLAHIIRSETPAAAN
                     IVSNRRKESALSPKNSLLDTGNNKQTVARANDQQSIRH"
BASE COUNT         1448 a         1027 c         1049 g         1167 t
ORIGIN      
        1 agaaaaaagt tgaacaaagc cgctggtcca aaaatccggc tgatcgtatc ccagcgcaat
       61 gggaatttgt tttgaaatga gaataattcc tattgccgcc agcattcctt tgatcaccgc
      121 agaaggaaaa taatacgcaa cggctccaag cttcaaaagg ccaagaatga cctgtaacaa
      181 accggccacg atgacagcaa gcaaaaaaag cctgtaatca cccagtgaaa ccaatgaagc
      241 tgcaaccact gttgttaaac ctgctgctgg tccggacact gcaagctgtg aaccgctgat
      301 aaatgacact acaaggccgc cgatcatgcc tgacaacagt cctgcatata gaggcgctcc
      361 ggacgctaag gcaatgccca aacaaagtgg gagtgcaaca agaaaaacgg agaggccggc
      421 gggtaaatcg tatttaagcc aaataattct gtagtacctt atcgtccgtc tcataagccg
      481 tgaaaattgc gcaaaggtaa aagtttcacc aggctttcaa caacaggctg cgacgtgttg
      541 gaatttcttg cgtttgaaaa ttcagtgtca tttatagccg atgttttcag ccagttcgat
      601 cttgctcctc ataaaacttc ccgatccccg gccaatcagt ttgttttttt cgtcatacaa
      661 attagaatca gcaataaaca agttagtcga tttgaatttc agctcgccga tggatctaat
      721 gattccagca gatgctggcc gaaggagttg tgtattgaac gagacagtat aaacaaacac
      781 atccgttacg atcgaattca ccgcgaaaaa agcagcatcg tcaagcattt taaaataaac
      841 cgagccatgg atggcattgg ctgcatgaaa aaattttggg tctatttgaa gtgaaacttc
      901 tgctttcccg tcggagatgt caatcgttat tcctttatat ataatatcgt ttatcggcgc
      961 agacagatac atccgcgcca gcttttcgca atgatctgct gatgtattca ttgatatgag
     1021 taagcgataa aattaacgaa gttaatttca ccctttagat gctgagcact ttcattttat
     1081 tgcttcaaac aacagagcaa cgtaggcgtt acgcactcat tgttgatatc cttgatagag
     1141 cgcggaatta taatctctaa ctttgaagcg gaattgtcaa tagaatatgc aagattttat
     1201 tcctgtaaca gaacaaccct cgctgtacag gcatctcgaa gaaatgccgg ttgaagagat
     1261 catcgcacat ataaatgaag aagacaagac agtagcgtct gcggttgaaa aagctttgcc
     1321 acagatcgaa aagctgatca tagccattac cgaccgaatg ctggccggtg gtaaattatt
     1381 ttacgtcggc gcaggcacga gcggtagact cgggatattg gatgccagcg aatgccctcc
     1441 tacttacggc gtgccgtata gcctggtgca gggaattatt gccggtggac ccgcagcaat
     1501 tacgcgcgct gcagaatttg ccgaggacga cgcaaggcag ggctggcttg acctgaaagc
     1561 ccgtggcgtt tcggcacatg attttgttgt aggcattgct gcgagcggaa caacccctta
     1621 cgttatcgga gctttgaaac aatgcagaaa gaatggtatt gatacgggct gcattacctg
     1681 caacgaagga acgccgcttg caagtgttgc cgactacccg gttgaagtga tcacagggcc
     1741 cgaatttgtg acaggcagca cgaggatgaa aagcggcact gctcaaaaaa tggtgctgaa
     1801 catgatctca acaacggtaa tgatacagtt aggccgcgtg gaagacaacc gaatggtgca
     1861 tatgcaactg aacaatgaaa agctcgttga ccgcggggta aaaatgctta tgcagaaaac
     1921 aggtctcgat aactatgaac aagcaaaaag catcctgcta aaagccggca gcataaagaa
     1981 ggctattcaa tccgtcagta aaacttaatt ggctaatttg aattttgtag ctaatttggt
     2041 catgcaaaaa tcatcgtgta tgaaaaacaa aattttaccc attgttagtt tactccttct
     2101 tctatcaact gctataaata gtttctcgca atccaggaaa ttttttgccg ttacaggcga
     2161 gcagtttggg agtgttaatt ggatcgcatt ccggcaaata gacatggatg gtgttgcacc
     2221 cgtgaaaaca ttgtacgttc ctgctgccga taatgaagca gtttacgatg cgttgacagg
     2281 gcagcagctc attaatgcca gcacagaagc cgtagcaagc gcatcaccgg ctcaaccctg
     2341 cggatgtctt aacaaaagaa tggttgcggc aatagcatat gatgcaacga ataatcggtt
     2401 gtactatacg cctatgcttg gaaaccaatt gcgttatctc gatctgaaca gcgatcatcc
     2461 taaaagctac gccgttacaa cacagctatt gaagtcattt acgaatcaac cgggcgaggc
     2521 atctgtagta acgcggatgg tttttgccgc aaatggcctt ggttatgcac ttacaaacga
     2581 taaccagcac ctgatccagt ttacaaccgg taaacaaacg gctatcactg atcttggaaa
     2641 actcactgac gcaaagacca acggtgagca ttcaataaat acacaattca aaagttgggg
     2701 cggcgacctg gtagctgacg caaaagggag tttatatttg tttgcgatgc agcgcggtgt
     2761 gttccaaata aatctcaatt caagagttgc aacgtatctc ggcaacatcc aaaatatccc
     2821 ggatgattat acggtaaacg cggctatggt tgaaaaagat ggttatgtaa ttgttggcag
     2881 tgctacaaac acttctacct attacagggt tgatctgaac accatgcagg cagtcgaatt
     2941 aaacaaaagc acaaagcaag tttataatgt ctctgatttt gcaaacgcga atctcctttt
     3001 tgcaaaaagc acttcccaac aaagcgctgt tagcttaaag acgatcgata gatcatcagt
     3061 aaccatatat ccgaacccgg cggtaagccg caattttgtg gtgcaattca gcaattttac
     3121 taatgacaaa tatgttattc agctcaatga aatggctggt aaatcagttt tgcaaaaaga
     3181 agttattatc tctggttccc agactgaaaa agttcagttg cccctttcca ttacttcagg
     3241 aacttacttg ctaaaaatcg tgaacagcaa aggcgaaagt gtatacactg acaaaataat
     3301 tgtgaactaa tcagcttagt aagtagccgt gatcccgccg cgttttttgg cgggattttt
     3361 tttgtgtagt gctcagcaag tgaagataaa acgtggacgt ttttcgaaac gaaatgccct
     3421 ttcgatgcac gcacgctgca ggtcaccagg catcttaaat ttaaagccgt aagattaagg
     3481 aactgggcgt ctgcctgaat caaaccaacc tgcaattgca cgagcaggtt cccgctttcg
     3541 ccggaatgac gttcaagagg ttgttttttt tctctcggct tcatgaggct ggagcaaaaa
     3601 caaccacatc gacgtcatgc cccaacgaaa tcatcataag tgtaatcagc atatgatcgg
     3661 gcatcttgaa cttaaagcgt gaagattaag caacccagcg tctgcctcga taaaagcaaa
     3721 attcaactga acgagcagct tcccgccttc gcgcgcaaag gcgggaatga cctacaatat
     3781 cggcaattcg caagccctgc atgaaattac ggattcattt tgtcggtgca ccttccggct
     3841 tttattatca attgaccggc tgatcatttg caagtatggt tttaaatttg acgttcgcgc
     3901 aattgtgccc tccgcgaaaa actatgaaat atctgttcgt cccattcatt cttattgcgt
     3961 gctcgtcaat agcggatgcc caaaacgttg attggttcaa ggggacatgg tatggattaa
     4021 aaagttttac ggacgcacga atcgggatac gagtgcttgt acgaatagaa gttgactccg
     4081 tacggggaaa ccgtttttca ggacggttca tctatatgta cccgaaggat acgctttcca
     4141 ggctcatcaa aactttcgac ggaagcttca aggaaaaaat cataagcgtg aataaaagca
     4201 aagaacttta tttgctcgat ccacgttcgc gaagtttttg gagcaactgc tcacaatgca
     4261 atgaaaccgg aagcttttat ataaaggaca cgaacctcgt tttcagaata acgacagcta
     4321 actgtggcga tagttgcaac ggtgaaagtt tcttcctgag aaacctgggt agctacgata
     4381 gctcaacgga aattgcagta agaaatttcg tctcaaacga aaagccagcg ccaacggcta
     4441 agacgagttc aaaacaaaaa aaggaggcaa agagcacgtc gatccctgtg aaaaataggg
     4501 ataacgatac gctggcatcc ttaaatatcg actcccttgc acacataatt agaagtgaga
     4561 caccagcagc ggctaacatt gtcagcaacc gaagaaaaga gagtgcgctt tcaccaaaaa
     4621 atagtctgct cgatactggt aataataaac agactgtcgc cagggcaaat gatcagcaat
     4681 cgatcagaca t
//
LOCUS       DASQJI010000007         8048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_614982,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000007 DASQJI010000000
VERSION     DASQJI010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8048
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614982"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /locus_tag="VEV83_00340"
     CDS             complement(<1..758)
                     /locus_tag="VEV83_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase subunit L"
                     /protein_id="HYK43583.1"
                     /translation="MPKDNSIQSVLIIGSGPIIIGQACEFDYSGSQAARSLREEGIKV
                     ILINSNPATIMTDPMMADKVYLLPLTVESIEQILEENQIDAVLPTMGGQTALNLCKEA
                     DELGVWQKNNVRLIGVDVDAIDTAENREKFRQLMINIGIKVAPSRVANSFLEGKEFAQ
                     DIGFPLVIRPSFTLGGTGGGFVHDKSELDEALQRGLQASPIHEVLVEKAVLGWKEFEL
                     ELLRDKNDNVVIICTVENMDPMGIHTGDSITVAPA"
     gene            complement(869..1963)
                     /locus_tag="VEV83_00345"
     CDS             complement(869..1963)
                     /locus_tag="VEV83_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYK43584.1"
                     /translation="MKKLLRKLFQKPVLRWADKFSSRPDKERVFAALTELHEKIEAGK
                     EKKGPVIPFDTATQKFIILSDQHKGTKNHADDFAVCENNYLAALKYYFDLGFYFIDLG
                     DGEELWENTIVSVKKYNQPSFDKEKLFLQQDRFIKIFGNHDLDWANNPAAPLILQGIY
                     GQKISISEGCILKTTINDRQFQVYLTHGHQGDMQSDGNWFSKFFVANVWGPLQSLLDI
                     NPNTPANNDQLKTLHNQIMYEWSSAQKNLLLITGHTHQPVFMSLTHLERLYFRLNEAK
                     TKNDADAIKQLETEMLKHKLEGGAIVEFNNVVPSYFNSGCCCFSDGDITGIEIADGSI
                     RLIRWKYINNVPAREILEEISLAALEKLLP"
     gene            2075..4594
                     /locus_tag="VEV83_00350"
     CDS             2075..4594
                     /locus_tag="VEV83_00350"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK43585.1"
                     /translation="MRKNLLLATLICYCSLVNAQNNVVVRQLDSALTFLFEQHLFNGA
                     VLYAEGGKVLYKKAFGTADFRTGAALQTNSSFNLASVSKQFISMCVLMLQEEGKLSVD
                     DDIKKYIPELPYSGITIRNLLTHTSGIPEYFDYFQNNRTPLDTLTNERMIRLFANLKP
                     PLDFETGTKWQYCNTNYCLLSSIVQRVSQMPIEKFIQEKIVSPLHLEETYMYNVFLPV
                     PANHVIGFSEENGRQKLDDLNYFDGITGDGNMYSSVEDLFKWEQSLYTEKLVKRSTLQ
                     QAFTPVHMKNDSTYGYGFGWFIEKENEIYWHTGGWAGFRNLIYRDVKKQRTFILLSND
                     NSGWGPRLARNIVEGKPFSLPSIQLITNVSLIDGTNTPARKASVRILDKTIIAVGNLS
                     AYKGETVIDGGGKILAPGFIDSHSHLDGSLQEHPEAIPALSQGITTIVVGQDGESDPI
                     DSINAHIKLKPIAINIASYTGQTTLRANVMGDSDLHRMATQPEIDSMKKLLAVEMKKG
                     SLGLSTGLEYEGSHFSSRDEVIQLAKVAGEFKGRYISHMRSEDIGLSDALDEIINIGR
                     EANLPVQISHFKIALKDDWGTAPQLLAELESARQRGIDITADCYPYEFWYSTLRVLFP
                     KTDYSNLESAQFVIDHTLDATASVVFPFAPNKAYEGKTITEIATMRNESPAQTLINLI
                     AILDEYEKKNPGDDNAEGIIGKSMTDADIIPLLSWSNTNLCSDGGAGGHPRSHGAFTR
                     MLAYYVREKKILTVENAVYKMTSLAAEHTGLKDRGIVAAGYAADLVLFDPATVKDNST
                     IKDATALSDGILKVWVNGKVVFQGKQTTHQYPGVFIERANK"
     gene            4626..5693
                     /locus_tag="VEV83_00355"
     CDS             4626..5693
                     /locus_tag="VEV83_00355"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HYK43586.1"
                     /translation="MEISDKANAIVITNGMLKEVNAKTAHGLIRGTSRFNIVGVLDKA
                     FAGQDAGAVLDGKHRNIPVFDSIESARHAVSDIRYCIIGVATHGGILPEAFITVIEEC
                     IQSGISIVNGLHEGLRDNPRLVAMAKEHHVELIDIRRPKQRFDLHFWHGKINEVDVPI
                     IAVLGMDCAIGKRTTCRMVMEACASNNIHAEMIYTGQTGWMQGSKYGFIFDTTLNDFI
                     SGEIEHAIVSCWKDTDADVILIEGQSSLRNPSGPCGSELLVSGNARYTILVHAPKRIY
                     YDHLPEWGLIPSVKSEIELIGMYHSKVIALALNTELCSDEEAFAFQKQFEHELKIPVL
                     LPIQEGVDKIIPVIKALLSPR"
     gene            6184..6612
                     /locus_tag="VEV83_00360"
     CDS             6184..6612
                     /locus_tag="VEV83_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HYK43587.1"
                     /translation="MRKYVPCGTTPKLVLMTENELATIAVDICYKLHTTLGPGLLESV
                     YEAAFIYELELRGISYTGQEATPAIYGNVILEVGFRADIVMDEKLLIEIKSVERLEKL
                     HHKIILTYLKLSRIKLGLLVNFNVDLIRDGIHRKIHGQLL"
     gene            6717..7781
                     /locus_tag="VEV83_00365"
     CDS             6717..7781
                     /locus_tag="VEV83_00365"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HYK43588.1"
                     /translation="MKIRSIQAWREKLPLKKPYTIAYKTIADTDLIFAEITLENGITG
                     IGSSNPFPEVVGETSESTVANLNSELIQNFVGRDIRAFQQLIDETATNFPNRPGTLAA
                     IDIALHDAFAKYLGISVLNFYGKKIEPLPTSITIGIKETNAMIEEAKAYRALGFRVLK
                     IKTGHNVDDDVERVLKIKEAFNNAFIIRVDANQGYTLEQLQKFIKDAGKQVELIEQPV
                     KAGADDLLQQLHTNERKVLAADESLLDATNASFLSHPPQSYGIYNIKLMKCGGIKAAK
                     EIASIAKHAGINLFWGCNDESIISITAALHAAYSCSNTKYLDLDGSFDLSKDLVEGGF
                     VVKDGYVYPTNEPGFGFTKI"
     gene            complement(7836..>8048)
                     /locus_tag="VEV83_00370"
     CDS             complement(7836..>8048)
                     /locus_tag="VEV83_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43589.1"
                     /translation="KPRFKEVMRLSDRDMNVIKGILDNSRKYNNFDIAARTSDKIRSL
                     LNITDYEEPVEFLETLLKDYNYFSNQ"
BASE COUNT         2294 a         1770 c         1784 g         2200 t
ORIGIN      
        1 gctggcgcaa ccgttattga atctccggta tggataccca ttgggtccat gttctcaacg
       61 gtgcatatga taacaacatt atcgttctta tcgcgcagca actcaagctc aaattctttc
      121 cagcccaaca ccgccttttc aaccaaaacc tcatggatcg gcgatgcctg caaaccgcgt
      181 tgtaatgcct catccagttc tgatttatca tgtacaaatc caccgcctgt tccgccaagt
      241 gtaaaggaag gacgaattac gagcggaaac ccgatgtctt gcgcaaactc ttttccttcc
      301 aggaaactgt tagctactct gctgggcgct accttgatcc caatattgat catcagttgc
      361 cggaatttct cccggttctc tgccgtgtct atcgcgtcaa cgtcaacacc gatcaggcga
      421 acattattct tttgccacac accaagttca tcggcttctt tgcaaagatt caaagcagtt
      481 tggccgccca tcgttggcaa tacagcatcg atctgatttt cttccaatat ttgttcaatg
      541 ctttccactg tcagtggtaa caggtacacc ttgtccgcca tcatcgggtc tgtcatgata
      601 gtggccgggt tgctattgat caggataact tttatgccct cttcgcgaag gctgcgtgcg
      661 gcctgcgaac cactgtaatc aaactcacag gcctggccaa tgatgatagg acctgaaccg
      721 attattaaaa cagattgaat ggaattgtct ttgggcatga cgagtaaatt ctgcaaatgt
      781 aattcgcagt ttctttttta ctacgtaaat tttcaaggtg ttccccacat ttcaaaatcg
      841 gttaccatta acagtgtaaa caataaattt atggaagcag tttttctaac gcagccaggc
      901 taatttcttc gagtatttcc ctcgccggca cattgtttat gtatttccat cttattaaac
      961 gaatactccc atccgcaatt tcgatcccgg ttatgtcgcc atcgctaaaa caacagcagc
     1021 cactattaaa atacgaaggg accacgttgt taaattcgac aatcgcacct ccttcgagtt
     1081 tgtgttttag catttccgtt tcaagctgct ttatggcgtc agcgtcgttt tttgtcttcg
     1141 cttcgttcaa cctaaaatat aaccgttcga ggtgtgtgag cgacataaac acgggttgat
     1201 gtgtgtggcc cgtgataagt aaaagatttt tttgagcact gctccattca tacatgatct
     1261 ggttatgcaa agtttttagc tgatcgttat ttgccggcgt attcgggtta atgtccagca
     1321 aggattgcaa cgggccccaa acatttgcaa caaagaattt actgaaccag ttaccgtcgc
     1381 tttgcatatc tccctggtgg ccatgtgtaa gatatacctg gaactggcgg tcgttgatcg
     1441 ttgttttaag aatgcatcct tcggagatag agattttttg gccgtagatg ccctgcaata
     1501 tcagtggcgc cgccgggttg ttcgcccagt caaggtcgtg attaccgaat atttttataa
     1561 accggtcttg ttgtaaaaac aacttctcct tatcgaatga aggctggtta tattttttca
     1621 ccgacacaat agtgttctcc caaagttcct ccccatcacc aaggtcgata aagtaaaatc
     1681 ccaggtcgaa ataatatttg agtgccgcca ggtaattgtt ctcgcatacg gcaaaatcgt
     1741 cagcgtgatt ttttgtgcct ttatgctgat ctgaaagtat aatgaatttt tgcgttgcgg
     1801 tgtcgaaagg aatgactggt cctttttttt ctttgcctgc ttcgattttt tcatgcagtt
     1861 ccgtcaatgc agcaaacacc ctttctttgt ccggcctgga ggagaattta tcggcccaac
     1921 ggagtacagg cttctgaaac aatttgcgca acaatttttt catacgggaa agaaataaaa
     1981 ctaagaaacg aatttcctga gcccggctta agatgggcgc gttaatcgtt tggctatttt
     2041 cgcatcgacg atgtcaattc gccgaatcaa aactatgaga aagaatttac tcttagcaac
     2101 gctcatttgc tattgctctt tagtgaatgc acaaaacaat gttgtcgtca ggcaactcga
     2161 ctcagcactt acttttttat tcgaacaaca tctgtttaac ggggctgtgt tgtatgcaga
     2221 gggcggaaag gttctgtata aaaaagcatt tgggacggcc gactttagaa caggcgccgc
     2281 acttcaaacg aactcttcct ttaatcttgc ttctgttagc aagcagttta tctcaatgtg
     2341 cgttttgatg ctgcaggaag aggggaaact ttctgtggat gatgacataa aaaaatatat
     2401 tcctgaactg ccgtacagcg gtattactat ccgcaacctg ttaactcata catcaggcat
     2461 tcccgagtat ttcgactact ttcaaaataa ccgaacgcca ttagatacac tgaccaatga
     2521 acgtatgatc cggttatttg ccaatctgaa accgccgctt gattttgaaa cgggaaccaa
     2581 atggcaatac tgcaacacaa attattgcct gctgtcgagt atcgtgcaac gcgtttcgca
     2641 gatgcccatt gaaaaattca tacaagaaaa gatcgttagt ccactgcacc tggaagagac
     2701 atacatgtac aatgtttttc ttccggttcc cgctaatcat gtgatcggat tctcagaaga
     2761 aaacgggcgt caaaaactcg atgacctgaa ttatttcgac ggcataaccg gggatgggaa
     2821 tatgtactct tccgttgagg atctttttaa atgggaacaa agtctgtaca ccgagaaact
     2881 tgtaaaacga tcaacgctgc aacaggcgtt tacaccggtg cacatgaaaa acgattcgac
     2941 ttatggttac ggattcggat ggtttattga aaaagaaaat gagatctatt ggcacaccgg
     3001 tggctgggca gggttcagga atcttattta tcgtgatgta aaaaagcaac gcacattcat
     3061 tcttctgagc aatgataata gcgggtgggg gccacgcctg gcgcgcaaca ttgttgaagg
     3121 caagcctttc tctcttccat cgattcaact tattacaaat gtttcgctaa tcgacggtac
     3181 gaacacgccg gcccgaaaag cttcagtgcg tatcctcgat aaaaccatca tcgctgtcgg
     3241 aaatctttct gcatataaag gcgaaaccgt gatcgacggc ggcggaaaaa ttttagcacc
     3301 aggctttatt gatagtcata gtcatctgga cggctcgtta caggaacatc ctgaagcgat
     3361 ccctgctttg agccagggca ttacaactat tgtggtagga caggatggtg aaagcgatcc
     3421 gatcgacagt attaacgcac acatcaaatt gaaacctatc gcaataaaca ttgcaagtta
     3481 tacagggcaa acaacgttgc gggcgaatgt tatgggtgat agtgatcttc atcgaatggc
     3541 gacgcaacct gagatcgatt caatgaaaaa gttgctcgcc gttgaaatga aaaagggctc
     3601 gcttggttta tctaccggtc tcgaatatga aggttcgcat ttttcctcac gtgatgaagt
     3661 gatacaactg gcgaaagtag ccggtgaatt caaaggcaga tacatcagtc atatgcgaag
     3721 tgaggacatc ggattgtctg atgcattgga tgagatcatt aatatcggtc gtgaagcaaa
     3781 cctgcccgtg cagatctcgc attttaaaat tgcattgaag gatgactggg gaacggcgcc
     3841 acaacttctt gctgaactcg agtcagcaag gcagcgggga attgacataa ccgcggactg
     3901 ttatccatac gaattttggt atagtacgct acgcgtgtta tttccaaaaa cggactactc
     3961 aaaccttgaa agcgcgcagt tcgtaattga tcatacgctg gacgccacag cttcggttgt
     4021 ttttccattc gcgccgaata aggcatatga aggaaagacg atcaccgaaa tcgcaacgat
     4081 gcgcaatgaa agtcccgcgc aaacactcat taatctgatc gccatcttag acgaatatga
     4141 aaagaaaaat ccgggcgacg ataacgcgga aggaattatc gggaagtcaa tgaccgatgc
     4201 cgatattatt ccattgttat catggtcgaa cacaaacctt tgttcagatg gtggcgccgg
     4261 cggccatcca aggagccatg gcgcgttcac acggatgctt gcctactacg tgcgtgaaaa
     4321 aaagatcctg acggttgaaa atgcggtcta caaaatgacg tctctcgctg ccgaacacac
     4381 cggtttgaaa gaccgtggca ttgttgcagc tggttacgcg gctgaccttg tgttatttga
     4441 tccggcaaca gtaaaagata attcaacgat aaaagatgca actgcattgt cggatggtat
     4501 tctcaaagtg tgggtgaacg ggaaggtagt ttttcagggg aaacagacaa cacatcaata
     4561 cccgggtgtg tttattgaaa gagcgaataa atagaaaagt tactgaaatt ctcaaacaag
     4621 gtaacatgga aatatcagac aaagcaaatg cgatcgtgat cacgaatggt atgctgaagg
     4681 aagtgaatgc aaagactgct catggactta tacgcgggac cagcagattc aatattgtcg
     4741 gtgttcttga caaggcattc gcggggcagg atgccggcgc agtgcttgat ggcaaacata
     4801 gaaatatccc tgtcttcgat tcgatagaaa gtgccaggca tgcggttagc gatatcaggt
     4861 attgcatcat tggtgttgcc acgcatggag gtattttacc cgaagctttt ataacggtta
     4921 tcgaagaatg tattcagtca ggcatctcga tcgttaacgg tttgcacgaa ggtttgcgcg
     4981 ataatcctcg tttggttgcc atggcaaaag aacatcatgt ggagctgatc gatatccgcc
     5041 gcccaaagca gcgattcgat cttcatttct ggcatggaaa gatcaacgag gtcgatgtgc
     5101 cgataatcgc agtgctcgga atggattgcg cgatcgggaa aagaactaca tgcaggatgg
     5161 tgatggaagc ctgcgcttca aataatatac acgctgaaat gatctatacc gggcaaaccg
     5221 gttggatgca gggtagcaag tatggattta ttttcgacac cacattaaac gattttattt
     5281 ccggcgaaat tgaacacgca atcgtcagtt gttggaaaga cacggatgcg gatgttattc
     5341 ttatcgaagg gcagtcgtcg ctgcgaaatc ccagtggccc ctgcggctcc gaattactcg
     5401 tttccggaaa tgcgaggtac acaatacttg tgcatgcacc aaaacggata tactatgatc
     5461 acttgccaga gtggggttta attccttcag tcaaatctga aattgagctg atcggcatgt
     5521 atcattctaa agttattgcg cttgcattaa acacggaatt atgttctgat gaagaagcat
     5581 tcgcatttca aaaacaattt gagcatgagc ttaagatccc ggtgctatta cccattcagg
     5641 aaggagtaga caagataatt ccggtaatta aagccttgct ttctccgcgg taagtttcgt
     5701 tcgagccacc tcatctcaac tgaatttttt ttgcgcaaat gcttcgcacg caaacacttt
     5761 gtgctcttgg cgcgcttcgt gggaaacaaa aaagcgttgc ccgcaaaggc acagcgctta
     5821 caaaggaaag cttagaaatt ccgctgcaca gcgatctttc gtcgagatcg cataaaacaa
     5881 ctttgtgccc tttgcgcgct tcatgggaaa ttatcgcctt cgaaattttc atcgtggaag
     5941 tatttcacct cgaccttaat ttctttgccg aaacgattaa actatttttt tcttcaaagc
     6001 tttgtgccct tttgccgcct ttgtgggaag atcatacatc ttgaaattcc gtttcgaacg
     6061 ctgacctcaa tatgaaattt cctttgcgca aatcattgtg ctctttccgg ccttggtggg
     6121 aaaaaaattg cgggcttgcg cccagactca cttcaatacg tattcgaaac atcatacaca
     6181 tgcatgagaa aatatgtacc ttgtgggaca actcctaaac tcgtgcttat gacggaaaat
     6241 gaattagcaa cgatcgccgt cgacatctgc tataaacttc acaccacgct cggacccggc
     6301 ttacttgaaa gtgtttatga agcagctttt atctacgaat tagaacttcg tgggatatct
     6361 tacaccgggc aagaagctac cccggcaatt tacggcaacg ttatcttaga agttggcttc
     6421 agggctgaca tagtgatgga tgaaaaattg ctcattgaaa taaaatcggt cgaacgactc
     6481 gaaaaactgc atcacaagat catcctaact tatttgaaac taagccgcat aaaacttgga
     6541 ctgcttgtaa actttaatgt agatctcata agggacggca ttcatcgaaa aattcatggg
     6601 cagttactct aaaaacaact gcacaaattc gttgttcgga ctctagcatt gaaagaaaag
     6661 ctttgcgtac tttgtgtgct ccgcgcgaaa accaaatctt tgtgagaata ttgtaaatga
     6721 aaatacgatc tatacaagca tggcgggaaa aactaccgct caaaaaacct tacacgatcg
     6781 cttataaaac gatcgccgat acagatctca tctttgcaga aatcacactc gaaaacggta
     6841 tcaccggcat cggctcttct aacccgttcc ccgaagtagt gggtgaaaca tcagagagca
     6901 ccgtggccaa tctcaacagc gagttgattc aaaattttgt tggcagagat atccgcgcat
     6961 ttcaacaatt gatcgacgaa acggcaacta attttcctaa ccgtccggga actcttgctg
     7021 ctatcgacat tgcattgcat gacgcgttcg caaaatatct cggaatttct gttctgaatt
     7081 tttacggaaa aaaaattgag ccattgccta cttcgattac gatcggcatc aaggaaacaa
     7141 acgcaatgat cgaagaagcg aaagcttacc gggctttggg atttcgtgtg ctaaaaataa
     7201 agaccggcca caatgtggac gatgatgtcg agcgggtgct caaaataaaa gaagctttta
     7261 acaacgcgtt cataattcgt gttgatgcaa accagggcta cactctggaa cagctgcaga
     7321 aatttatcaa agacgcaggt aagcaagttg aactcatcga acaaccggtg aaagcaggag
     7381 ccgatgattt attgcaacaa ctacatacga atgaaagaaa agtactagct gcagacgaat
     7441 cgctcctcga cgcgacaaac gcgtccttct taagtcatcc accgcagtct tatggcattt
     7501 ataacataaa gctgatgaaa tgcggtggta ttaaagcggc aaaagagatc gcttccatag
     7561 caaagcatgc tggtataaat ttattctggg gttgcaacga cgagagcatc ataagcatca
     7621 cagcagcgct gcatgcggca tactcatgtt caaacacaaa atatcttgat ttggatggaa
     7681 gttttgatct gagcaaagac cttgttgaag gaggatttgt ggtgaaagac ggttatgtgt
     7741 atccaacaaa cgaaccagga tttggcttta caaaaattta gctgccacgc caagcctatc
     7801 ttttatcgtt gtgaagaggc tggaagcact gcttattatt ggtttgaaaa ataattgtaa
     7861 tccttcagca gcgtttctaa aaattcaact ggttcttcat agtccgtgat atttaataac
     7921 gagcggatct tgtcactggt gcgtgccgcg atgtcgaagt tgttatactt cctgctgttg
     7981 tccaaaatcc ctttgatcac attcatgtcg cgatcgctta aacgcatcac ttctttaaat
     8041 ctcggttt
//
LOCUS       DASQJI010000008         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2304397,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000008 DASQJI010000000
VERSION     DASQJI010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304397"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2240
                     /locus_tag="VEV83_00375"
     CDS             <1..>2240
                     /locus_tag="VEV83_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK43590.1"
                     /translation="IRFGGADLHMPVTSDMMGELLKKDYPQVEEYTRIYTFNGDKLIK
                     KGTDYIDEQKVANVDSTFFKVFQLPAVAGDLNTALVEPNTVVLTESSAKKYFPQDAAH
                     GLTHVIGKTIEIKDDKNPLYKVTAIVSDMPENSHFHFDFFFSMKNVDYDWGQLTSHNF
                     YTYLKLKQGTDYKAFEKNFPAFIDKYVLPQAKQFMNINSMDEFEKAGNKLVYSLMPLT
                     DIHLHSDRAFELSPSGNMQYVYIFSAVAIFILLIACINFMNLTTARSSKRAREVGIRK
                     VLGTERKDLISQFLFESTLIVLVSLVLAIGVAFAVLPLFNDVANKQMTIGSLFNPYIL
                     PLLIALPFVVGLMAGSYPAFFLSAFRPIEVLKGKLKLGGRSGGLRSVLVVVQFTASIV
                     LIVGTIVVYKQLNYIQTRNLGYNKDQVIVVDGVSALNTNTAAFKNEVLKMPGVVSGTV
                     SGFLPVSNSFRSDNTYSKEAVMDSKNGFDMQNWFVDYDYINTLGMHIIKGRNFSKDFG
                     GDSAAVIINETTAKILGYPDPIGKKVYTSIDAQGHTAAFDIIGVVKNFNFETLHQEVG
                     PLCFRLGGGGGSASFKINAANARALIPQIESKWKALAPGLPFSYRFLDESFNEMYRSE
                     QRVGKIAMTFSVLAIFIACLGLFGLATFIAEQRTKEIGIRKVLGASVNGIVQMLSRDF
                     VILVAVAFVVATPLAWWLMRSWLQDFAYRINVEWWMFVAAGVAALCIALITVSTQAIR
                     AAIANPV"
BASE COUNT          606 a          476 c          546 g          612 t
ORIGIN      
        1 atacggtttg gcggcgccga cctgcacatg ccggtaacat ctgacatgat gggtgaactg
       61 ttgaaaaaag attatccgca ggtggaagaa tacacgcgca tctacacatt caacggcgac
      121 aaactcatca aaaagggtac ggattatatc gatgagcaaa aagtggcgaa tgtagattct
      181 acttttttca aagtattcca actgccggct gttgcaggag atctcaacac ggcactggtt
      241 gagcctaaca ccgtagtgct tacggagtcg tcggcaaaaa aatattttcc gcaggatgct
      301 gcccatgggt taacccatgt aatcggaaag accatagaaa taaaggacga taaaaacccg
      361 ctctataagg ttaccgcaat agtaagcgat atgcccgaga actcgcattt tcatttcgac
      421 ttctttttct ccatgaaaaa tgtggattat gattggggac agcttacaag ccacaatttt
      481 tacacttacc tcaaattgaa gcagggaact gactataaag ccttcgaaaa aaactttcct
      541 gcatttatcg acaaatacgt tttgccacag gcgaaacagt tcatgaacat aaacagtatg
      601 gacgagtttg agaaggccgg gaataaactt gtgtattcat tgatgccgct gaccgatatt
      661 cacctgcact cagaccgcgc gtttgaatta agtccaagcg gaaacatgca gtatgtgtac
      721 attttttcag ccgtcgctat attcatactc ctcattgcgt gtatcaattt tatgaacctg
      781 accaccgcgc ggtcctcgaa acgtgcgagg gaggtgggca taagaaaagt gcttggcact
      841 gaacgaaaag atctcatctc gcaatttctg tttgaatcaa cattaatagt tttggtgtcg
      901 ttggtgcttg ccatcggagt tgccttcgcc gtgctgccgt tattcaacga cgtagccaac
      961 aagcaaatga ccatcggaag cttatttaat ccctacattt tgccgttgct gatcgcactt
     1021 ccgtttgttg ttggcttaat ggccggtagt tatcccgcat tctttttatc ggcattcagg
     1081 cctattgaag tgttgaaagg aaaactaaaa ttgggcggca ggagtggtgg cctgagaagt
     1141 gtgctcgtcg ttgtacagtt taccgcatcg atcgtgctga tcgtcggaac catcgtcgtg
     1201 tacaagcaac ttaactatat tcaaacaaga aatcttggct ataataaaga ccaggtaatc
     1261 gtggtcgatg gtgtttccgc gttaaataca aacaccgccg catttaaaaa cgaggtgctt
     1321 aagatgcctg gtgtcgtgag cggcacggtg agcggatttt tacctgtttc aaattcattc
     1381 cgaagtgata acacgtactc gaaggaggca gtgatggatt cgaagaacgg gttcgatatg
     1441 cagaattggt ttgtggatta tgattacatc aacacgctgg gcatgcatat cattaaaggc
     1501 agaaatttct ctaaagattt tggcggcgat tccgctgctg ttattattaa cgaaacgaca
     1561 gcgaaaattt tgggctatcc tgatcctatt ggaaaaaagg tttataccag cattgatgca
     1621 cagggtcaca cggcggcttt tgatatcatc ggtgtggtaa agaatttcaa tttcgaaacg
     1681 ctacaccagg aagttggccc gttatgtttc cgacttggtg gtggcggagg ttccgcatcc
     1741 tttaagatca acgccgctaa tgcgcgggcg ctgatccccc agatcgaaag taaatggaaa
     1801 gcattggcgc cgggcctgcc tttcagctat cgtttccttg atgaatcgtt taatgaaatg
     1861 taccgttctg agcaacgtgt cggcaaaatt gcaatgacat tttcagtgct cgcgatcttt
     1921 attgcatgcc tcggcttatt tggacttgca acatttatcg ccgaacaacg cacaaaagaa
     1981 attgggatca ggaaagtact cggtgcaagt gtgaatggta tcgtgcaaat gctaagcagg
     2041 gattttgtga tactggtagc tgttgcgttt gttgtagcca caccgctggc atggtggctc
     2101 atgcgcagtt ggttacagga tttcgcgtat cgcatcaacg ttgaatggtg gatgtttgtc
     2161 gcggccggtg ttgcagcatt gtgcattgcg ctgataacgg taagtaccca ggcgattcgc
     2221 gcagcaattg caaatcccgt
//
LOCUS       DASQJI010000009        12689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_922281,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000009 DASQJI010000000
VERSION     DASQJI010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12689
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922281"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1688
                     /locus_tag="VEV83_00380"
     CDS             <1..1688
                     /locus_tag="VEV83_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HYK43591.1"
                     /translation="QQKTYCNPINIDYGFTPIPNFSEQGRHRATADPVIVLYKDKYFL
                     FSTNQWGYWWSDDMLHWKFIPRKFLKPYHHVYDELCAPAVIALHDTLMVIGSTYTQDF
                     PLWMSTNPTVDDWKEAVDSFKVGAWDPALFADDDGRMFIYFGSSNFYPTYGQEIDRKT
                     FQPVGERKELLHLNDTIHGWERFGEYHDNTFLPPFIEGSWMTKHNGKYYLQYGAPGTE
                     FSGYGDGVYVGEHPLGPFTYQSHNPFSYKPGGFATGAGHGATFQDVFGNWWHVSTIVL
                     NVKNNFERRIGIWPAGFDKDDVLYCNTAYGDYPTYLPSVKNEDHIKGNFTGWMLLNYD
                     KPVQVSSTYGTYEANNAVDENIKTYWCAKTADKGEWIQSDLGVVSTVKAIQINYADQD
                     ADILGKRTDLYHQYKLYSSLDGKTWEVLVDKSNNHSDVPHDYVELEKPVQARYIKLEN
                     IHMADGKFAISGLRVFGNGNGSRPDTVKHFVALRGNSERRNCWLKWQRSDDAYAYVIY
                     TGIAPDKLYTSIMVYNTNEYYFSAMEKNLPYYFQIEAINENGISKRTSVIKVE"
     gene            complement(1760..3946)
                     /locus_tag="VEV83_00385"
     CDS             complement(1760..3946)
                     /locus_tag="VEV83_00385"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK43592.1"
                     /translation="MKNVIGGLCALILVLHCSAQYHYPSTKTVDSSDTYFGVTYHDPY
                     RWLESIETPEVETWFKQQAAYTDSALSQLNGRDELVEEWKAMDKLRPAVMSSFSYENG
                     RLFYRKTMPGENVGKIYYRKGTSGEEQLLFDPTSYVPGKTLSVQYILPSYDGKKLAIA
                     YSEQGAELSVVKFIDVDSKQFLKDSLYPTLFFGGAWAFDNNSFLYGWIKSADSKDPAS
                     RLNPKTKLHKLGTEMSDDIDYLSNASYPELHIDPSVYPFVFVSEDSKNYVFGGAGSVQ
                     PEFEIYYAPIGEFNNQKINWKVLAKPADKLVRSFVVKDDDVYAITYNNAKNYKVIATS
                     LKNPDWNNSITIAAENPDRTIEGLAYSKDYLFITYSDGINNYLSKYDFATKKTSDVKL
                     PFSGTVGVTCFDTKSNDCLIGITSWTKPYTEFNYNAETDAFTPSSFNKPVVYPKPYQD
                     LVAEEVQVKGHDGVMIPLSIIHKKGINMDGSNVCFMDSYGAYGSSMTPYFSVRENSLA
                     VRGVVVAIPHVRGGSEKGEEWYRAGYKTTKPNTWKDFISCAEYLIDKHYTSPQKLAGT
                     GTSAGGILISRAVTERPDLFAAAICNVGCANAMRLEFGANGPVNIPEFGTVKDSAECR
                     ALYEMDGMQHVVKGTKYPAVLCVGGWNDPRVVAWEPGKFAAALQNASTSGKPVFLKIN
                     YDNGHFTEDKSVTFANFANQYAFVLWQCGHPDFQPKKPGQAPYKKL"
     gene            complement(4007..4624)
                     /locus_tag="VEV83_00390"
     CDS             complement(4007..4624)
                     /locus_tag="VEV83_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HYK43593.1"
                     /translation="MEYIDHLRKDKKLATLINEPLHERIRPHKNIPLQLIGNIMSQQL
                     NTKVADIIYNRFLALYNNKVPTTQQILDTADEKLRAIGLSNAKVKYVKNVAEFCVKNK
                     VTDKKLQAMTNEEVIELLTQIKGVGKWTAEMLLMFALGREDVFSIDDYGIQSGMVKLY
                     KLHKLEKKQLRERLMKISNKWAPYRTYACLYFWHWKDNAPVKTEK"
     gene            complement(4672..5457)
                     /locus_tag="VEV83_00395"
     CDS             complement(4672..5457)
                     /locus_tag="VEV83_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HYK43594.1"
                     /translation="MAKRSKKKKKERNNLIVIGCSLTAILVIYIVIVYRARRDENASR
                     FALYPDFNIEIPMGYKIHGIDVSSYQGNIYWPAVAKMQDQDVRIQFAFIKATEGLSNV
                     DRQFKRNWQKAKEANITRGAYHYFLATKSGRIQAENFIRTVKLQEGDLPPVLDVEELY
                     GVPVDSMRNRVKVWLQTVEKTYGVKPIIYTNVSFYQNFLGTSFDGYPLWVAHYFVKKQ
                     PGITEGWFFWQHNAAGKVDGIRTRVDFNVFSGDTTSFQNLLVH"
     gene            complement(5468..7453)
                     /locus_tag="VEV83_00400"
     CDS             complement(5468..7453)
                     /locus_tag="VEV83_00400"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK43595.1"
                     /translation="MRSIVIIVMIGFALQSTAQPTRIDKAIQLAESEKQTFAATHYAT
                     AQSLASGNFVVDYYRCEWNINPAIRYISGSVTSYFTITTATSQIVYDLSKQLTVDSVR
                     LRKKLLSFSQKLNNTLVIHFSTTLSPGKRDSISVFYHGTPPDTGYFAGSFVQTTHGNN
                     IPVLWTLSEPYGAMAWWPCRNGLDDKADSIDIYITHPSQYKASSNGIPVSEMPNGASI
                     TSHYKHRYAIASYLVGIAVTNYSVDSRVIPIGNHNVPLIQYVYPEDLTTFQNNTFTVS
                     EALQLYSSYFGLYPFAKERYGQTEFSRGGGMEHQTNSFVTSATENLMTHELGHQWFGD
                     KVTCGSWQDIWLNEGFATYLADMFYTEMIDTTYYMPYVEGDLSYIVSQPGGSVWVNDT
                     TSIDRVFDSRLSYKKGAFLLRMLRWTLGDSAFFKGIKQYLNDPQLRYGFASTADLQRN
                     LESASGQNLDYFFRQWFYGEGYPSFKVQWGQDSITGQVNFIVSEKTSVPLSVDFFKVA
                     LPIQLMNGSKKKTVTLVCKFNNQQFTLPDPGFKVKSIAIDSDHYFISANNRAIKQPSL
                     QFTSAAISAPSLQGAKIWVSPNPVTTVATVTLQNVHGHVQLKLFNSTGVQSWTYSGDV
                     QSRSLQLQIPFGSYAAGSYRLVLTEANGSTSSAMIVK"
     gene            7548..8579
                     /locus_tag="VEV83_00405"
     CDS             7548..8579
                     /locus_tag="VEV83_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HYK43596.1"
                     /translation="MRYFNWNDSINLISKLSLRRSLNAAKVITSYQLTKLFGKPIQWG
                     YPISISFEPTTSCNLRCPECPSGLREFTRPTGMLKKDFFKETIDAVHKELLYLIFYFQ
                     GEPFLNPDFLEMVKYAHDKGIYTATSTNAHYLNDEKARRTVESGLDRLIISIDGTTQE
                     VYKQYRVGGNLEKVLEGARNIVKWKKELKSRTPFVFFQFLVVKPNEHQVEDVKRLAKE
                     TGVDQVRFKTAQVYDYDNDPNHLIPSIDKYSRYRKDKNGKMQIKSGLSNHCWKLWHAN
                     VITWDGLVVPCCFDKDAMHRLGNLRTQSFKDIWHNENYKQFRSELMKSRKNIDICANC
                     SEGLTVWED"
     gene            8632..9534
                     /locus_tag="VEV83_00410"
     CDS             8632..9534
                     /locus_tag="VEV83_00410"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK43597.1"
                     /translation="MKQLLNCCLLMGIFFSNTYAQDTVITSQNNAALKTEDSVRSFAP
                     EKSVQQIPQTSVYHIKWKVDGPVLAAGFGLSAVGLSLIQNKDDLTQEELATKTKDDIP
                     FFDRGNAGYYDENANDASYIPFFAAFGMPVAVLLVDKTERNQAGKILVMYTEALAITS
                     SMYTLSAGLIDRSRPLVYGGEEVPLEKKLSNNSQRSFYAGHVAASACASFYAAKVYSD
                     LHPDSKFRTYLWIVSAAVPAVTAYYRYQAGQHFLSDCILGYALGASTGILVPQLHKIK
                     NFDRVSIYPATWPKAKGLGVAYRF"
     gene            complement(9690..10292)
                     /locus_tag="VEV83_00415"
     CDS             complement(9690..10292)
                     /locus_tag="VEV83_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43598.1"
                     /translation="MKKVLTAVCVLTALFSVSRSTAQTATFKAAVFDIDIMVQALPEY
                     RGIDSLTQIYERDTLGSEYQIYQSEYQRLDSTFKSDSTLKKPQSVLDYTNNQKQQMAF
                     NLIYWNQIAQNKSDSYRGRLAQPLYQKVLAAYKKVLSTRKYNLILKTNTYEVGTQIDN
                     LFPLVAKEMNVTLPPGLMGDPNQALQEPQNLPQSKPASNQ"
     gene            complement(10320..10835)
                     /locus_tag="VEV83_00420"
     CDS             complement(10320..10835)
                     /locus_tag="VEV83_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HYK43599.1"
                     /translation="MKKVLLATLFVIGAACSVNAQKYAIIDTKYILGKMPDYVDADKK
                     LQAISDQWQKEIDNLQAQLNDMYKNYDAEQYMLSDDLKKKREDELFNKEKELRDLQKR
                     RFGYQGDLFKEREKLVKPIQDRVYNAVQKMAVAHGYDLVLDKSEGITIIFADPKLDRS
                     DDILRELGVKD"
     gene            complement(10880..>12689)
                     /locus_tag="VEV83_00425"
     CDS             complement(10880..>12689)
                     /locus_tag="VEV83_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYK43600.1"
                     /translation="RDAAIVQDTQYVAAKSNNMHIEIQLDEGHKYYFGNISWSGATKY
                     SDSLLAALLGIKKGDIYNRDILDKKLGITISPEGGDISGLYMDDGYLFFHVDPVETAV
                     YDDTIDYNIKVYEGPQATFKNIKISGNDRTKEYVIRRELRTLPGEKFSRSDVIRSQRE
                     IANLGFFNQEKIVPDIVPDQENGTVDVNWQVEEKSGDQLELSAGFGGGIGVTGTLGVT
                     FNNFSAKNIFRKEAWDPLPVGDGQKLSLRVQSNGRAYRSYNASFTEPWFGGKKRNAFS
                     LSFYDTKFANAYDPTTGTYTKVAADTSYFKTTGFTVGLSKQLKWPDDYFSAGVAFTFA
                     RYKLKNYYIDPTNLPGYNNGNSYNMNLKFTLQRYSEDQQIFPRTGSNFMLSLQLTPPY
                     SLIDPSLVHAVNPYEWIEYYKWRFNGEWFVPIGRAGGPDHNKQFVMKFAAKFGYMDRY
                     NTALNISPFERFQVGDAGLSNSYALLGYEIISQRGYPVYQTSDPKVNPDQQGASEYFT
                     IFNKYTLEMRYPFALNPSSTIFGLTFFEAANGWYSFKEYNPFRLRRSVGVGLRFFLPM
                     FGLLGFDYGVGLDRYGPNSSIKDASRFTFMLGYEPE"
BASE COUNT         3432 a         2818 c         2830 g         3609 t
ORIGIN      
        1 ctcagcaaaa aacctactgc aatccgatca acatcgatta cggtttcacg cctatcccaa
       61 atttttctga gcagggccgc catcgtgcga cggcagatcc tgtgatcgtt ttatataagg
      121 ataaatattt tctgttctcc accaatcaat ggggttattg gtggagtgat gatatgctgc
      181 actggaaatt tattccgcgg aaatttttaa agccttatca ccatgtgtat gatgagttgt
      241 gcgcaccggc agtgatcgcg ttgcatgata cattgatggt gatcggttct acatacacgc
      301 aggattttcc gttgtggatg agcactaacc caacagtcga tgactggaag gaagctgtgg
      361 attcatttaa ggttggagca tgggatcccg cattgtttgc agacgatgac ggccggatgt
      421 ttatttactt cggctcaagt aatttttacc caacgtacgg acaggagatc gaccgcaaaa
      481 cttttcaacc tgtcggcgag cgaaaggaac ttctgcattt gaacgatacc attcatggct
      541 gggaacgttt cggcgagtat cacgacaata cttttcttcc tccgttcata gaaggttcat
      601 ggatgacaaa gcataatggg aaatattatt tgcagtatgg tgcgccgggc accgagttca
      661 gcggctatgg cgatggcgta tatgtgggtg agcatccgct gggcccgttt acgtatcaat
      721 cgcataatcc attttcatat aaaccgggag gcttcgcaac cggcgcagga catggagcaa
      781 ctttccagga tgtgtttggc aactggtggc atgtaagcac gatagtcctc aacgtaaaaa
      841 ataattttga gcggcgcatc ggcatttggc ccgcgggttt tgataaagat gatgttcttt
      901 attgcaacac cgcatatggc gattatccaa cttatttgcc gtcggtgaaa aatgaagatc
      961 atatcaaagg aaattttacc ggctggatgc tgttgaatta tgacaagccg gttcaagtgt
     1021 cgtcaaccta tggaacttac gaagcgaata atgctgtcga cgaaaacata aagacatatt
     1081 ggtgcgcaaa aaccgctgac aagggcgagt ggatacaatc tgacctgggt gttgtaagca
     1141 cggtgaaggc aattcaaatt aattatgcag accaggatgc tgatattctt ggcaagcgca
     1201 cagatctcta tcatcaatac aaactatatt cttcacttga tggaaaaacg tgggaagtgc
     1261 tggttgacaa aagcaacaat cattcagatg ttcctcatga ttacgttgag ctggaaaaac
     1321 cggtacaggc gcggtacatc aaacttgaaa acattcatat ggccgacgga aaatttgcga
     1381 tcagcggcct gcgtgttttt ggaaatggca acggttccag gcctgatacg gtaaaacatt
     1441 tcgtcgcatt gcgtggcaac agcgaacgcc ggaattgctg gcttaaatgg caacgaagtg
     1501 atgatgcgta tgcgtacgtt atctatacag gcatcgcacc tgataaatta tacacgagca
     1561 tcatggtgta taataccaat gaatactatt tcagcgcgat ggaaaaaaac ctgccttatt
     1621 acttccaaat cgaagcgatc aatgaaaacg gcatcagcaa aagaacaagc gtgataaagg
     1681 tggaatgacc gatttaaaac gcaattgata atccgaatta ccgtcagctg taactacaat
     1741 gcttttcggg aagaatgtat taaagctttt tataaggcgc ctgccctggc tttttcggct
     1801 gaaaatccgg atgcccgcac tgccataata caaaagcata ctggttcgcg aagtttgcaa
     1861 acgttacgct tttatcttct gtaaaatgtc cgttgtcata atttatttta aggaacacag
     1921 gctttcccga tgtggacgcg ttctgcaaag cggcggcaaa ttttcccggc tcccatgcaa
     1981 caacgcgcgg atcattccac ccgccgacgc agagaactgc gggatatttt gttcctttta
     2041 ccacatgctg catgccgtcc atttcatata aggccctgca ttctgcactg tcttttactg
     2101 tgccgaattc aggaatgttc accggaccat tcgcgccaaa ttcaagcctc atcgcattgg
     2161 cacaacccac attgcagata gccgctgcga aaagatcagg cctttctgtt actgcccggc
     2221 tgatgagaat tccgccggca cttgttcctg tgcctgcgag cttttgaggc gaagtgtagt
     2281 gtttgtcgat caaatattca gcgcagctaa taaaatcttt ccacgtattt ggtttggtgg
     2341 ttttgtaccc ggcgcgatac cattcttcac ccttttcgct tccgccacgc acatgaggta
     2401 tggcaacgac gacgccacgc actgcaagcg aattttcacg cacgctgaaa taaggagtca
     2461 tgctactgcc ataagcaccg tagctatcca taaaacaaac attggagccg tccatgttga
     2521 tgcccttttt atgaataatt gagagcggga tcataacccc gtcgtggccc ttcacctgaa
     2581 cctcttctgc aacaaggtcc tggtaaggtt ttggataaac cactggctta ttaaaactgc
     2641 tcggcgtaaa cgcatcagtt tccgcattat aattgaattc agtataaggc tttgtccacg
     2701 aggtgatgcc gatcaaacaa tcatttgatt ttgtgtcaaa gcaggtaaca ccgacagtgc
     2761 ctgaaaaagg aagtttaacg tcgctggttt tcttcgttgc aaaatcatat ttcgacaaat
     2821 aattgttgat gccgtcgctg taagtaatga agaggtaatc tttactgtaa gccagccctt
     2881 caatcgttct gtcaggattt tctgcagcaa tcgttattga gttattccag tcaggatttt
     2941 tcaggctggt tgcaatcacc ttataatttt ttgcattgtt ataagtgatg gcatatacgt
     3001 catcgtcttt cacaacgaaa ctgcgaacca gtttatcagc aggtttagcg agcaccttcc
     3061 agtttatttt ctgattgttg aattcaccaa taggcgcgta gtaaatttca aactcaggct
     3121 gcacacttcc ggcgccaccg aaaacataat tctttgaatc ttcgctcaca aacacgaatg
     3181 gataaacact cggatcaata tgcaattccg ggtaactggc attgctgaga taatcgatat
     3241 cgtcgctcat ttctgtgcca agcttatgca gtttggtttt tggattcagc cgtgaagcag
     3301 ggtctttact gtctgcagat tttatccatc cataaagaaa agagttgttg tcgaatgccc
     3361 aggctcctcc aaagaaaagt gtaggataaa gcgaatcttt cagaaattgt ttcgagtcaa
     3421 catcaataaa ttttacaaca gacaattccg cgccctgctc tgaataagca atggccagtt
     3481 tttttccgtc gtagcttggc aaaatgtatt gcactgaaag cgttttcccg ggtacataag
     3541 atgtgggatc aaacaatagc tgttcttcgc ccgatgtacc cttccggtaa tagatcttgc
     3601 ccacattttc tccgggcatt gttttgcggt aaaacaatct gccgttttca taactaaatg
     3661 aactcatcac ggcagggcgg agcttatcca tcgccttcca ttcttcgaca agttcatctc
     3721 tgccgtttag ctggctcagt gccgaatcgg tataggctgc ctgctgtttg aaccacgtct
     3781 caacttcagg cgtttctata gactcaagcc agcggtaagg atcatgatac gttacaccaa
     3841 agtaagtgtc gctgctgtca accgtttttg tcgacggata atggtattgt gcggagcaat
     3901 gcaatactag aatgagggca caaaggcctc cgataacatt tttcattatg gcgaattgag
     3961 tgttagaaaa attataggcg taaatataat aaaacgaaat tccaattcat ttttcggttt
     4021 tcacaggcgc attgtccttc cagtgccaga agtagaggca cgcgtaagtt ctgtacggcg
     4081 cccatttgtt cgagatcttc atcagccttt cccgcaattg ttttttctcc agcttatgca
     4141 gcttatacag tttcaccatg cctgattgaa tcccgtaatc atctatagaa aaaacgtctt
     4201 cccttccgag cgcaaacatc aataacattt cagcggtcca ttttcccacg cccttaattt
     4261 gcgtaagcaa ttcgatgacc tcctcgttgg tcatagcctg aagtttctta tcggtgacct
     4321 tgtttttcac acaaaactcc gccacgttct tgacgtattt gacctttgca tttgaaagac
     4381 cgatcgcgcg caacttttcg tcggcagtgt caagaatttg ctgagtagtg ggcactttat
     4441 tattgtacaa tgcaaggaac cggttataaa tgatgtcagc gaccttggtg ttcagttgct
     4501 ggctcatgat atttcctatc aattgaagcg ggatattttt atggggcctg atgcgttcat
     4561 gcaaaggctc attgatcaag gttgcaagct tcttgtcttt ccgtaaatgg tctatatatt
     4621 ccataaattc aagttgtaca tccgcgagga ataaatatca agaaagaaaa cttaatgcac
     4681 aagcaaattt tgaaagctgg ttgtatcgcc gctgaatacg ttgaagtcaa cacgtgtcct
     4741 gatgccgtct actttacctg cagcattgtg ctgccagaag aaccatccct cggtaatgcc
     4801 gggttgtttc tttacaaaat aatgcgccac ccataacggg tagccgtcaa agctggttcc
     4861 caaaaaattt tgataaaagg aaacattggt ataaatgatc ggttttacgc cgtaggtttt
     4921 ttccacggtt tgcagccaca ccttaacacg atttcgcatc gaatcgacag gcactccgta
     4981 caattcctcc acatcaagca caggaggcag gtctccctct tgtaatttta cggtccttat
     5041 aaagttttca gcctgtatcc gtccgctttt cgtcgcgaga aagtaatgat aggcgcctct
     5101 cgtaatattt gcctcctttg ccttttgcca atttcgcttg aattgcctgt ccacattcga
     5161 caatccttcc gtcgctttaa taaatgcgaa ttgtatccgc acatcctggt cttgcatttt
     5221 ggcaacggca ggccagtaaa tatttccctg gtaactgctc acatcaatgc catgaatttt
     5281 ataacccatt gggatctcaa tattaaaatc aggatacagc gcaaaccgcg aagcattttc
     5341 gtcccgtcgc gcccggtaaa ctataacaat ataaatgaca aggatcgcag ttagtgagca
     5401 accgatgacg ataagattat tcctttcctt ttttttcttc ttcgatcttt tcgccattaa
     5461 aggaaaatta tttgactatc attgctgaac tggttgaacc attagcttct gtaagaacga
     5521 gcctataact tcctgccgca tatgagccga aaggaatttg caattgcaga gacctgcttt
     5581 gcacatcacc cgaataagtc cacgattgca cacctgtact gttgaacaat ttcaactgca
     5641 catggccatg aacattctgt aatgtgactg ttgcgaccgt cgtgactgga tttggactaa
     5701 cccaaatttt tgcaccttgc agagacggtg ctgaaatggc ggcgctggta aactgaagag
     5761 agggttgttt tatcgccctg ttattagcgc tgatgaaata atgatcggag tcgatggcta
     5821 tcgattttac tttaaagccc ggatccggca gtgtgaactg ttggttattg aacttgcaga
     5881 cgagggtgac ggtctttttc tttgaaccgt tcataagttg tatcggaagt gcgactttga
     5941 aaaaatcaac ggacaatgga accgaagttt tctcgctcac aataaagttc acctggccgg
     6001 tgatcgaatc ctggccccac tgaactttaa acgagggata tccttcgccg taaaaccatt
     6061 gcctgaaaaa ataatcaagg ttttgtccgc ttgcactttc aagattgcgc tgaaggtcgg
     6121 cggtgcttgc aaatccgtaa cgcaactggg gatcattgag atactgttta atgcctttga
     6181 agaaagcact gtcacccaaa gtccatcgca gcatacgtaa aaggaacgcg ccttttttat
     6241 agcttaaacg cgagtcaaaa acgcgatcga tgctcgtggt gtcgttcacc caaactgaac
     6301 cgccgggctg agagacaata taagaaaggt ctccttcaac gtacggcata tagtaggtag
     6361 tatcgatcat ttctgtataa aacatatctg cgagataggt ggcgaatcct tcatttagcc
     6421 atatatcctg ccagcttccg caagtcactt tgtcaccaaa ccattggtgc ccgagctcat
     6481 gcgtcatgag attttcagtt gcgcttgtaa cgaaagaatt tgtctggtgc tccattccgc
     6541 cgccacggct aaattcggtt tggccatagc gttcttttgc aaacggatac aacccgaagt
     6601 agctgctgta tagttgcaat gcctctgaga cggtgaatgt attgttctga aacgttgtca
     6661 gatcttccgg ataaacgtat tgaataagcg gtacgttgtg gttaccgatc ggtatcactc
     6721 ttgaatcaac gctatagtta gtgacagcga tgccgaccag gtacgaggca attgcatagc
     6781 gatgtttgta atgggaagtg atcgaggcac cgttcggcat ctcacttacc gggatgccgt
     6841 tagaagacgc tttgtattga gacggatggg tgatgtaaat atcaatgctg tcagctttat
     6901 catctaatcc atttctgcaa ggccaccatg ccatggcgcc gtacggctca ctaagtgtcc
     6961 acaatacagg gatattattg ccgtgtgttg tttgcacgaa cgatcctgcg aaataaccgg
     7021 tgtcaggcgg agtgccgtga tagaagacag aaatcgaatc tcgttttccg ggtgaaagtg
     7081 ttgttgaaaa atgaatgaca agcgtgttgt ttagtttttg cgagaaggac agcagttttt
     7141 tacgaaggcg aacactgtcg acagtgagtt gtttgctaag atcgtaaacg atctggcttg
     7201 tagcggttgt gatcgtaaaa taggaagtga cacttccgct gatataccgt attgccgggt
     7261 ttatgttcca ctcgcatcgg taataatcga ccacaaaatt tcccgaggca agcgactgcg
     7321 cggttgcata atgggtagcc gcaaatgttt gcttttccga ttctgcaagt tgtatagctt
     7381 tatcaatacg tgtgggctgt gctgtggatt gcagagcaaa acctatcatt acaatgatta
     7441 caattgatct catgaacatc gaattgaagg gagtcatcac aatataacat atcctttctt
     7501 tagtgaagca gcccattacg tctataattg taattttaca atcctttatg cgctatttca
     7561 actggaacga tagtatcaat cttatatcca aacttagcct gcgtcgcagt ttaaacgctg
     7621 caaaggttat aacgagttac cagttgacta aattattcgg taagccaatt caatggggtt
     7681 acccgatatc gatatctttt gagccaacca cttcatgcaa tttgcgttgc cccgaatgtc
     7741 caagtggcct tcgggagttt acacggccga ccggcatgtt gaagaaagat tttttcaaag
     7801 aaacgatcga cgccgttcac aaagaacttc tttatctcat cttttatttc cagggggagc
     7861 cgtttttaaa cccggatttt ttggaaatgg taaagtatgc gcatgataaa gggatttata
     7921 ccgctacctc aacaaatgcg cactatttga acgatgaaaa agcgaggcga actgttgaaa
     7981 gtggcctgga ccgcctgatt atttcgatcg atggaacgac gcaggaagtt tacaaacaat
     8041 atcgcgtggg tggcaatctc gaaaaagttt tggaaggggc gcgaaatatt gtgaaatgga
     8101 agaaagaact gaagagcagg acacctttcg ttttctttca atttctcgtg gtaaaaccca
     8161 atgagcacca ggtggaagat gtgaagcgtt tggccaaaga gacgggtgtg gaccaggttc
     8221 gtttcaaaac tgcccaggta tacgattacg ataatgaccc taatcacctc attccttcaa
     8281 tagataagta tagccgttac cgcaaagaca aaaacggcaa aatgcagatc aaaagcggct
     8341 taagcaatca ctgctggaaa ctttggcacg caaatgtcat tacatgggat ggactggtcg
     8401 tgccttgctg tttcgacaag gatgccatgc accggttggg gaacctccgg acgcagtctt
     8461 ttaaagacat atggcataac gagaattata aacagtttcg cagtgagtta atgaagagtc
     8521 gcaagaatat tgacatctgc gctaactgca gcgaaggcct caccgtctgg gaagattaag
     8581 ttccttccct gtctgaacgt caagcaaacc tttaaataaa atcaataaac tatgaaacag
     8641 cttctaaact gttgcctgtt aatgggcatt tttttcagca atacttatgc ccaggacacg
     8701 gtgatcacat ctcagaacaa tgctgcgcta aaaaccgaag actcggttcg atcttttgct
     8761 ccggaaaaat ctgttcaaca aattcctcaa accagtgttt atcatatcaa gtggaaggtc
     8821 gacgggccgg tgcttgcagc aggatttgga ttaagtgcgg tcgggctatc acttatacaa
     8881 aataaagatg accttaccca ggaagaactt gcaacaaaaa ctaaagacga tattcctttt
     8941 tttgatcgcg ggaacgcggg ttattacgat gaaaatgcga acgacgcgag ttacattccg
     9001 ttttttgcag cctttggtat gcccgtcgca gtgctgcttg ttgacaaaac ggaacgcaac
     9061 caggcaggga aaattctggt catgtacacg gaagcacttg ccattacatc gagtatgtat
     9121 acactgagtg cgggattgat agaccgtagt cgtccactgg tgtatggtgg agaagaggtg
     9181 cccttagaaa agaaactgag taataactcg cagcgttcat tttacgcggg ccatgtcgca
     9241 gcatctgcat gtgcgagctt ctatgctgcc aaagtgtata gcgacttgca tccggattca
     9301 aaattcagaa cttatttgtg gattgtctcg gctgctgtgc cggcggtgac agcatattac
     9361 cggtaccagg cgggtcagca ttttttaagc gactgcattc ttgggtatgc gctcggcgca
     9421 agtaccggca tcctcgtgcc gcaattacat aagataaaga attttgatcg cgttagcata
     9481 tatcctgcaa cgtggcctaa ggcaaaaggg ctcggagttg catatagatt ctgagcatct
     9541 gagttgagag tttagatact actgaagacc gagcgaaggt cgattaacct gtcatctacc
     9601 aaccgtcatc cgtcaacagc tagataaatg attaaacaaa aaagaccata cgatctcgca
     9661 tggtcttttt cgtgtgatat gatttctaac tattgattag acgccggctt tgattgcggt
     9721 aaattttgcg gttcctgcaa ggcctggtta ggatcgccca ttaaacccgg cggcaaagtc
     9781 acattcattt ctttggcaac aagcggaaaa aggttgtcga tctgtgtacc cacctcatat
     9841 gtatttgtct tgaggatgag gttgtacttt cttgtggaaa gaactttctt gtaagccgcc
     9901 aacacttttt ggtataatgg ctgggctaat ctgccgcgat agctatccga tttattttgt
     9961 gcgatctggt tccagtaaat aagattaaat gccatctgtt gcttttgatt attcgtgtaa
    10021 tcaagaacag attgaggctt cttcagagta gaatcagatt tgaatgtgct gtcgagacgc
    10081 tgatattcgc tctggtagat ctggtattca gagccgagcg tgtctctttc gtagatctgc
    10141 gtcaagctgt caatgccccg gtattcagga agggcctgaa ccatgatatc tatatcgaaa
    10201 accgcagctt tgaatgttgc tgtttgtgca gttgagcggg aaacggaaaa taaagcagtg
    10261 agaacacata ctgcagtgag aaccttcttc attttttacg tattgattta tttgattgtt
    10321 taatccttaa cccccaattc acgaaggata tcatcgctac ggtccaattt ggggtcggca
    10381 aagataatgg taattccttc acttttatcc agtaccagat cgtagccgtg cgcaacggcc
    10441 attttttgca cagcgttata aacgcggtcc tggatgggct tcaccaactt ttctctttct
    10501 ttgaaaagat caccctggta tccaaaacgg cgcttttgga gatcgcgcaa ttctttttcc
    10561 ttattgaaca attcgtcttc gcgtttcttt ttcagatcat cgctaagcat gtactgttca
    10621 gcatcataat tcttatacat gtcgttcaac tgagcttgca ggttatcgat ctctttctgc
    10681 cattgatcgc tgatagcctg cagcttttta tcggcgtcca cataatccgg cattttccct
    10741 aaaatatatt tcgtatcgat gatggcatac ttctgcgcgt ttacactaca tgccgcacca
    10801 atcacaaaaa gggttgccag taagactttc ttcataacaa caattttaat ggtatcaaat
    10861 attggtgtgt taaatgtagt tattcaggct cataacccag cataaacgtg aacctcgatg
    10921 catctttgat cgatgagttt ggtccataac gatcgaggcc aacgccgtag tcaaatccaa
    10981 gcaaaccaaa cataggcagg aagaagcgta aacccacccc cacagaccgg cgcagccgga
    11041 agggattgta ttctttaaat gaataccagc catttgctgc ttcgaaaaaa gtgagaccaa
    11101 aaatcgtact gctcggattt aaagcgaatg gataacgcat ttcaagcgtg tacttattaa
    11161 agatggtaaa gtattctgaa gctccttgtt ggtcaggatt gaccttggga tccgaagttt
    11221 gataaaccgg ataacctctt tgtgaaatta tttcgtaccc caataaagca taactgttgc
    11281 ttaagcccgc atcgcctacc tggaagcgtt caaacggaga aatattcagt gcggtgttgt
    11341 accggtccat gtacccaaac ttcgccgcaa acttcatgac gaattgttta ttgtgatctg
    11401 gtcctccagc ccttcctatc ggcacaaacc attctccgtt gaaacgccat ttgtaatact
    11461 cgatccattc atacgggttc actgcatgta caaggcttgg gtcgatcaaa gaatacggag
    11521 gagtaagttg caggctaagc atgaaattgg aaccggtacg cgggaatatc tgctgatctt
    11581 ctgagtaacg ctgaagcgta aacttcaaat tcatgttata tgaattccca ttattgtagc
    11641 cgggcaaatt tgttggatct atgtaataat ttttgagctt ataccttgca aacgtaaatg
    11701 caacgcctgc tgaaaaataa tcgtcgggcc atttgagttg ctttgataat cctactgtga
    11761 aaccagtcgt cttgaaatat gaggtgtctg cagcaacttt tgtataggtg cctgtggttg
    11821 ggtcgtaagc gtttgcaaat ttggtatcgt agaagctaag agaaaaagca ttacgctttt
    11881 tgccaccaaa ccagggttcc gtaaaggaag cattgtaaga gcgataagca cgaccgttac
    11941 tttgtacacg caggcttaac ttttgcccgt cgccaactgg cagcgggtcc catgcctctt
    12001 tgcggaaaat gttctttgcc gaaaagttgt tgaaagtaac cccgagtgtt cctgtaacgc
    12061 cgatgccgcc gccaaagccc gcactgagct caagctggtc tccggatttt tcttccacct
    12121 gccagttaac atccacagta ccattttcct ggtcgggcac aatgtcggga acgatttttt
    12181 cctggttaaa gaagcccagg tttgcaattt cccgttgtga acggatcaca tcagaacggc
    12241 tgaacttttc acccggcaat gttcttaatt cacggcggat cacatactcc tttgtcctgt
    12301 cattgccgct gatcttgata ttcttgaacg tcgcctgcgg tccctcatac actttgatat
    12361 tataatctat cgtgtcgtcg taaaccgccg tttctaccgg gtcaacgtga aagaacaggt
    12421 acccatcatc catatataag ccactgatgt cgccgccttc gggagaaatc gttatgccca
    12481 attttttgtc gaggatatcc ctgttataga tatcaccttt ttttatccca agcaaagcag
    12541 cgaggagaga gtctgaatac ttggtcgcgc cactccagct aatatttccg aaataatatt
    12601 tatggccttc gtcgagctgt atctctatgt gcatgttgtt cgactttgca gccacatatt
    12661 gagtgtcctg cacgatcgct gcgtcgcga
//
LOCUS       DASQJI010000010         2267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_308108,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000010 DASQJI010000000
VERSION     DASQJI010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308108"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..640
                     /locus_tag="VEV83_00430"
     CDS             <1..640
                     /locus_tag="VEV83_00430"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK43601.1"
                     /translation="NFSQLLHINRIDPVKVIDTARTPNITIVFYPPGVNHYIPGHLCD
                     LVKKNDGDPSYIPLEKFFPFDGFSKKVFSLKTRREQLSFMEEYLLKKYCGMEMPLLND
                     AISLLSDLEQPHTIPGICSRLGTSPRNLTRLFNKHICLSPVELKSIYQFRFSLEKKFE
                     TGGKLRYKDIGYESNYSHSSYMIRMYRKYTGLNPSSFFDKVSVEGNYVSLSL"
     gene            729..1706
                     /locus_tag="VEV83_00435"
     CDS             729..1706
                     /locus_tag="VEV83_00435"
                     /inference="COORDINATES: protein motif:HMM:NF042672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6624 domain-containing protein"
                     /protein_id="HYK43602.1"
                     /translation="MKQIKLMLLCGCAFLFLHTNAQLTNAYKDTVKKAEQLYYSKDYD
                     RSARTYSKAFALNGGQATQDDRYNAACSWALAGEKDSAFFHLLKAARDNKYDNYSHIT
                     IDSDLNSLHDDARWKDVLAMVTKNKEAAEANYIKPVVAILDTVYIEDQRYRRDIVQLI
                     KDSGMQSQVVQRQLKLMDDADSVNLEKVTKILDEYGWLGYDKVGRMGALTIFLVIQHS
                     PLAVQQKYLPMMREAVAKKQAHPANLALLEDRVAIREGRKQIYGSQVATDTTTGKNFL
                     LPLEDPDNVDARRASVGLGPLADYLKSFDVDWDVDEYKKELAEKEGKKE"
BASE COUNT          750 a          470 c          497 g          550 t
ORIGIN      
        1 taacttcagc cagctattgc atatcaacag gatcgacccg gttaaagtga tcgacaccgc
       61 aaggactcca aatatcacga tcgtctttta tccgcctggc gtaaatcatt acatccccgg
      121 ccacttgtgc gacctggtta aaaagaacga tggtgatccc tcatacatac cacttgaaaa
      181 attttttccg tttgatggat tttccaaaaa agtgttttca ttaaaaacgc gtcgcgaaca
      241 attgtcattc atggaagaat atctgctgaa gaaatattgc ggaatggaaa tgccgttgct
      301 gaatgatgct atctcattac taagtgacct tgaacaacca cacacgatcc ccggtatctg
      361 tagccgcctg ggtacaagcc cccgcaatct tacgcgtctt ttcaacaaac acatttgcct
      421 ttcaccggtt gaattgaaaa gcatatatca atttcggttt tcgctcgaaa agaaattcga
      481 aaccggaggt aagttgcggt ataaagacat tggttatgaa agcaactaca gccactcgtc
      541 gtacatgatc cgcatgtata ggaaatatac ggggctaaat ccgtcctcgt tttttgataa
      601 ggtttctgtg gaaggtaatt atgtttcgct ttcattgtaa catcaacatt ccattaacaa
      661 agctgtccga aaagtgcaat tctgcattca gtctccacca tagttttggt taactgaaaa
      721 tgccatttat gaaacagatc aaattaatgt tgctgtgcgg ttgcgctttc ctttttcttc
      781 acacaaacgc tcagctcacc aacgcctaca aagacaccgt gaaaaaagcg gaacagcttt
      841 attacagtaa agattacgat aggtctgcac gaacatattc caaagccttt gcattaaatg
      901 gtggacaggc aacacaggat gaccggtaca atgcggcgtg ctcctgggcg cttgccggtg
      961 aaaaagattc tgcgttcttt catttgctaa aggcagcccg cgacaacaaa tacgacaatt
     1021 attcgcacat tacgatcgat tcggacctaa actctctaca tgacgatgcc cgatggaaag
     1081 acgtgctggc catggttaca aaaaataaag aagcggctga agcgaattac atcaaacccg
     1141 tggtagcaat attggatact gtttacatcg aagatcaacg ataccgtcgg gatattgttc
     1201 aactgataaa ggactcagga atgcagtcgc aggttgtgca gcggcaatta aagcttatgg
     1261 atgatgcgga ttctgtgaac ctcgaaaaag tgacaaagat ccttgacgaa tatggatggc
     1321 ttggatatga taaggtcggt cgcatgggag cgctgacgat cttcctcgtc attcagcatt
     1381 cgcctttggc ggtgcagcaa aaatatttgc cgatgatgcg tgaggcggtt gcaaaaaaac
     1441 aggcacatcc ggctaatctt gctttgcttg aagatcgcgt tgcgatccgt gaaggaagaa
     1501 agcagatcta tggcagccag gtagccacag acaccacaac cggaaagaat ttcttgttgc
     1561 cgttggagga tccggacaat gtcgatgcga gaagagcgtc ggtagggttg ggccctttgg
     1621 ctgattattt gaaaagtttc gacgtggact gggacgtaga cgaatataaa aaggaactgg
     1681 cagaaaagga agggaaaaag gagtgagacg gagtgtaccg gctgaatatg gaaatgaagt
     1741 gcgagattta ggaataaaaa ttcaagaaac aaatagcaag atccaaagaa attaaaaaga
     1801 caaaacttta aaagcgtcgc caattcagaa agcaaatcaa gcgcagaata aaaattcaag
     1861 aaacaaatat caagatccaa ataaataaaa aatgaaaaac tccaaagccg tctccgtagt
     1921 cagcgtactt ctttaatctg caatctgaaa tcgccagtct gcaatcgaaa aatcgaaatt
     1981 cgtacatcca atgagatgcc cgatcaaggc cttctgtgat ctgattgggc agacgttcat
     2041 gacgtcgagg agcttgctat taaatttcaa aaggcgagag aaaaattaga aagcaaatga
     2101 caggtgataa taaaacattc aagaaacaaa tcacaagatc caaataaata aaaaatgaaa
     2161 aagtccaaag ccgtggccct ggcaggcgaa ttgaaaaaaa tctgcaatct gcaatctgca
     2221 atcgccaatc tgcaatcgaa aatcgaaatt cgtacatcca atgagat
//
LOCUS       DASQJI010000011         3261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_308169,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000011 DASQJI010000000
VERSION     DASQJI010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308169"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VEV83_00440"
     CDS             <1..613
                     /locus_tag="VEV83_00440"
                     /inference="COORDINATES: protein motif:HMM:NF037725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide ligase PGM1-related protein"
                     /protein_id="HYK43603.1"
                     /translation="INPLGEVEIISTHDQVLGGEENQVFIGAAFPAAKEYAAEVAYMA
                     ERVANLMATQGVLGRFSIDFLSAFTEDSWRHYALEINLRKGGTTHPFLMLQFLTDGVY
                     DAPSGCFQMPNGQSRFYFASDNVESPAYIGLTPSDLIDIAMFHGLMYDSTTQEGVMFH
                     LIGALSQYGKLGMVCIASSHERAQMLYQKTIEILDYECIQKDF"
     gene            661..1089
                     /locus_tag="VEV83_00445"
     CDS             661..1089
                     /locus_tag="VEV83_00445"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HYK43604.1"
                     /translation="MLGSLTHNEIDEVLQNNIVGRIGCGVGSKIYVVPINYVYDGKHI
                     LAHAMPGLKIDMMRTHPDVCFEVDQVQNVTNWKSVILWGTYDELLDERSRNEAIKALA
                     EKMIHIKVSSSSLKENAHDSVRPVIFRIIIDEKTGRFERD"
     gene            complement(1114..2268)
                     /locus_tag="VEV83_00450"
     CDS             complement(1114..2268)
                     /locus_tag="VEV83_00450"
                     /inference="COORDINATES: protein motif:HMM:NF037527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43605.1"
                     /translation="MKPDEYHWDAVELEIILVKRRHMNSNILHKHDPVVDPIQDAPAV
                     SIIMPFEPMMVPKAELELRLKHAAETAEAGLLANYSFERTMPVIVKLRLLLLHLNYNS
                     NKKSIVIFVSPFTEQVYYLGVHVEEKVIVDESFEIRDLIYNKKQDVKYLVLLLSAESS
                     RIYLGNCSPFQLIKANVPDNILAYKNDIAERVANFSDPVKRKEILLEKFLHHMDQGLK
                     YVLHVYNLPVFVLGAEKVLGYFKKISKNREKLAAFIHGNYVDASEADIRKVLQPYLKD
                     WRKIKEQTILQEVERANDDGKLASGIENVYAAAMQNNSRLLVVEKDFTYPAHLLINKD
                     KAYQLSASSVSFYIKDVVDNIIEKVLKHGGDVEFIDDLQEHEHIALIQYY"
     gene            complement(2488..2667)
                     /locus_tag="VEV83_00455"
     CDS             complement(2488..2667)
                     /locus_tag="VEV83_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43606.1"
                     /translation="MNTKFSGLILAGLAAFAWYKYSKMSPEQRRNLVNNVKDKGKKIY
                     DQYMPSKAKETVETI"
     gene            complement(2784..>3261)
                     /locus_tag="VEV83_00460"
     CDS             complement(2784..>3261)
                     /locus_tag="VEV83_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43607.1"
                     /translation="DAHFALLQAMQEIDLIIGKEVLKLMPQKMDTNTVNTSDDNVTSN
                     VGFIGTTIHRSWGTQKNVDLSIIGNSPLVATLNAFLNTPVLGGMMSNGNNKIIKVQGY
                     KGQLQKEDNGSGQTNYTIQIPLGNSLITFAGKNCTDTQIMAWANTMPLQQIAKLIQ"
BASE COUNT          860 a          684 c          746 g          971 t
ORIGIN      
        1 tatcaatcca ctgggtgaag tggaaattat tagcacgcac gaccaggttc ttggcggtga
       61 agaaaaccag gtgttcatcg gagcggcatt tcctgccgca aaagaatatg cagcagaagt
      121 cgcatacatg gcagaacgtg tggcaaacct catggcaaca cagggcgtgc ttggaaggtt
      181 cagtattgac tttttaagtg cattcaccga ggatagctgg cgccattacg cgcttgaaat
      241 aaatctgcgt aagggcggca ctacacaccc gttcttaatg cttcagtttc ttaccgatgg
      301 cgtgtatgat gcaccgtcgg gatgctttca aatgcccaat ggccagtcga ggttttattt
      361 tgcttctgac aacgtggagt cgccggcata cattgggctc acgccgtcag atcttatcga
      421 cattgctatg tttcatggct tgatgtatga cagcaccacg caggaaggtg tgatgtttca
      481 cctgatagga gcgctttccc agtacggaaa attgggcatg gtatgtatcg cttcaagtca
      541 tgaacgcgcg cagatgttgt atcagaaaac gattgagatc ctcgattatg aatgcataca
      601 aaaggacttt tagcgcgtaa tagactcttt acaatatttc tcagcttgac aaaaaataat
      661 atgttaggta gtctcacgca taacgaaata gatgaggttt tacaaaacaa tattgttgga
      721 aggatcggct gcggggtagg cagcaagata tatgtcgttc cgatcaatta cgtgtacgac
      781 ggcaaacata ttcttgcgca cgcaatgccc gggttgaaaa ttgacatgat gcgcactcat
      841 ccggatgttt gctttgaagt agaccaggtg cagaatgtta caaattggaa gagcgtcatc
      901 ctgtggggta cttacgatga gctgctggac gaacgaagcc ggaacgaagc aataaaagcg
      961 ttagccgaaa aaatgataca tatcaaagtc agcagtagct ctctgaaaga aaatgctcat
     1021 gacagtgtac ggccggtgat attcagaata attatcgacg aaaaaaccgg caggtttgaa
     1081 cgcgactgac ggcaaggggc ggcgacttct gatttagtaa tattgaatga gggcgatatg
     1141 ttcgtgctct tgcaggtcat cgataaattc cacatccccg ccgtgtttca aaactttctc
     1201 aatgatgttg tcaacgacat cctttatgta aaatgatacg ctcgatgcag aaagttggta
     1261 agccttgtct ttgttgatca gcaaatgtgc aggatacgtg aagtcctttt cgaccacaag
     1321 taacctgctg ttgttttgca ttgcggccgc atatacattt tcgatgccgc tggcaagttt
     1381 gccgtcatcg tttgctcttt caacttcctg cagaatagtc tgctctttga tctttcgcca
     1441 gtctttcagg tacggctgca aaactttccg gatgtccgcc tcacttgcat ccacataatt
     1501 gccatgaatg aaagcagcca gtttttccct gttctttgaa atttttttga agtaaccaag
     1561 cactttttcc gccccgagca cgaagaccgg caggttgtaa acatgcagta catactttaa
     1621 gccctggtcc atgtgatgca aaaatttttc gagtaatatc tccttccttt tgaccggatc
     1681 tgaaaaattt gccacgcgct ctgcgatatc gtttttatat gcaagtatgt tgtcagggac
     1741 gttcgccttt attaattgaa acggtgaaca attgccgaga tagatcctgc ttgattctgc
     1801 acttaataaa agcacgaggt atttgacgtc ttgttttttg ttgtaaatca gatcacgaat
     1861 ttcaaacgat tcatcgacga tgaccttttc ctccacatga acaccgagat aatatacctg
     1921 ctctgtgaac ggagaaacaa agatgactat gcttttttta ttagaattgt aattgaggtg
     1981 tagcagcaat agccttagtt taactattac gggcatcgtt ctttcaaaac tgtagttcgc
     2041 taacaatccg gcttcggcgg tttctgccgc atgttttaaa cgaagctcga gttcggcttt
     2101 gggcaccatc atgggttcaa acggcatgat gatggaaact gcaggcgcat cctgtattgg
     2161 atctacgacc ggatcgtgtt tgtgtaaaat gtttgaattc atgtggcgac gctttaccaa
     2221 aattatttca agttcaacgg cgtcccaatg atattcatca ggtttcatgg tgactgctaa
     2281 cactccacca tacatctgca aaatcgcttt ataaattagt aatgggtgag tcctcgtgcg
     2341 cgagcggcgt ggaaacgctg gacatgttga ccagtaaaca aacaaaaaag cgatgaaaaa
     2401 agtagtcatc gctttgtgtc atcatttccg tgagaccgga gatgatgtct tgcttacgta
     2461 agcaggttga gagatcaacg tgctacatta aatagtttcg acggtttcct tcgctttgga
     2521 gggcatatat tgatcatata tttttttgcc cttgtcttta acgttattaa cgaggttcct
     2581 cctttgctca gggctcatct tggaatattt ataccatgca aatgcagcaa gacctgcaag
     2641 gatcaatcct gaaaattttg tgttcatgac agtattttta aagtaattca ataatggact
     2701 acttattaaa gaatcatgcc agatttatgg aatctgtcaa tctgcgagtt gtattttttt
     2761 agccggtagc atccgagcga tatctactgt atgagttttg ctatttgctg aagcggcatt
     2821 gtgtttgccc atgccattat ttgagtatct gtgcagttct taccagcaaa cgttatgagg
     2881 gaattcccca aagggatctg tattgtgtaa ttagtttgtc cactgccgtt atcttctttt
     2941 tgcagttgtc ctttgtaccc ctgcaccttg atgatcttgt tgttcccgtt gctcatcatg
     3001 ccgccgagca ccggcgtatt gagaaaggca ttaagcgtcg cgacgagcgg tgagttgccg
     3061 ataatggaaa ggtccacatt tttctgtgtt ccccaactgc ggtggatggt tgtgcctata
     3121 aagccaacat ttgatgttac attatcgtca cttgtgttaa cagtattagt gtccattttt
     3181 tgcggcataa gcttgagtac ttccttgcca atgataagat cgatctcctg catcgcctgc
     3241 aataaggcaa agtgcgcgtc c
//
LOCUS       DASQJI010000012         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_461756,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000012 DASQJI010000000
VERSION     DASQJI010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461756"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2080
                     /locus_tag="VEV83_00465"
     CDS             <1..2080
                     /locus_tag="VEV83_00465"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HYK43608.1"
                     /translation="AKGTPGKTFNIGEAKNFTPYILVEPGGAITIFNTKPEMGQGTFQ
                     SIPALIAEEFEVSLDQVTIKQSNGEKEFGDRQRAGGSASVRTSYTDLRKVGASAKAVF
                     ITAASQKWQVDEASCYAENGKVIHSPTNRTFTYGDLVEEASKLELPKEPKLKDPKDFK
                     ILGKISKRPDVPLKINGAAEFGIDVQLPNMLYATVERCPVLGGTLKSFDASEAMKVPG
                     VQKVVKAERVVGVYHFTGVAVIANSYWAALNGRKKLKVEWDTKGFETFNSSTYEDHLR
                     SLSNEQGLIDNNAGSVDSLNISSENSIEAFYETPIVAHHPLEPLNCVAEVQGDKLEVW
                     VSTQVASAITGSGPNDLPQRVGFTPDNVKLHAKFVGGGFGRRLNLDFIIEAVNIAKQV
                     NQPVQVIWTREDTTEQGPFRPMTFSKLKGGFSSDGRLMSFEHKVISPSLQQANRAEFD
                     SNKVDGSMVEGIAEQAYEIPNIRTSYVRADFHVPIAAWRSVTSSTLAFAQECFLDELA
                     NKAKKDPLEFRLELLSKPSDAKRVLLKLKEVSKWDTPLVAGKGRGVAQWEFFAGLCGQ
                     VVEVTYNADKSIKIDKVYAVIDLGEVVNPDNVKNQVEGAIVMALGAATKPGITFKNGK
                     VVEGNVYNNQLVRMHETPDIEVHILAEGGKIKGVGEPGLPPFAPALGNAIYAATGKRV
                     RKMPFDLRNI"
     gene            2103..2429
                     /locus_tag="VEV83_00470"
     CDS             2103..2429
                     /locus_tag="VEV83_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HYK43609.1"
                     /translation="MISAATFREMALSFPHTEQVPHFERIGFKIIGRRMFCTYLETNN
                     TANIFLTPAEQKIFCEIDNVNIYAVPNKWGEKGATTFELNTVAKEIIMEALLSAYNVV
                     LKRKKG"
     gene            complement(2697..>2906)
                     /locus_tag="VEV83_00475"
     CDS             complement(2697..>2906)
                     /locus_tag="VEV83_00475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43610.1"
                     /translation="SCDILDHADLLIHHWQGGNNNSGTNCIHPCTTFSPPNSFSSLPA
                     MSCHVLKVDKHEANLLSDQVEETEG"
BASE COUNT          896 a          587 c          709 g          714 t
ORIGIN      
        1 tgctaaggga actcccggca aaactttcaa tatcggcgag gcaaaaaatt ttacgccgta
       61 catactcgtt gagccgggcg gagccattac gatcttcaac acaaaacccg aaatgggcca
      121 gggaacattc caatcgattc ccgcactcat cgcggaagaa tttgaggttt cacttgacca
      181 ggtaacgatt aaacaatcaa acggagaaaa agaattcggt gaccgtcaac gcgcgggagg
      241 cagtgcatcg gttagaacga gctatactga cctgagaaaa gtcggtgctt cagcaaaagc
      301 tgtattcatc acagcagcaa gtcagaaatg gcaggtcgat gaagccagtt gttatgcaga
      361 aaatggcaaa gtaattcata gcccaacaaa ccgcacattt acgtacggcg acctcgtaga
      421 agaagcgtcg aaactcgagt taccaaaaga accaaaactc aaagacccga aagatttcaa
      481 aatcttaggt aagatcagta agcggcctga tgtgccatta aaaataaatg gcgcggctga
      541 attcggcatc gatgttcagt taccaaatat gttgtatgcg acggtggaaa gatgcccggt
      601 tcttggaggc actttgaaaa gttttgatgc aagcgaagcg atgaaagttc cgggtgttca
      661 aaaagttgtt aaggcagaaa gggtcgtcgg cgtttatcat tttaccggtg ttgccgtaat
      721 tgccaattct tattgggcag ctttaaatgg acgaaagaag ctcaaggttg aatgggatac
      781 gaaaggcttt gaaacattca actcatcaac ttacgaagat cacttgcggt cactttcaaa
      841 cgaacaaggc ttgatcgata acaatgctgg ttcggttgat tcattgaaca tttcgtcaga
      901 aaattcgatc gaagcttttt atgaaacgcc aattgttgca catcatccat tggagccatt
      961 gaattgcgtc gccgaagtgc aaggcgataa attagaagta tgggtatcga cgcaggtagc
     1021 aagcgcaatt accggaagcg ggccgaatga tcttccgcaa cgtgttggct ttacacctga
     1081 caatgtaaaa ctgcacgcaa aatttgttgg cggtggtttt ggcagaagac tgaacctgga
     1141 ttttatcatc gaagcagtaa atattgcaaa acaggttaat caacctgtgc aggttatctg
     1201 gacccgtgag gacacgacag aacaagggcc tttcagaccc atgacctttt cgaaattgaa
     1261 gggcggcttt tcaagcgatg gtagattaat gtccttcgag cataaagtga ttagcccttc
     1321 attgcaacag gcaaaccggg ccgagtttga cagcaacaag gttgatggtt caatggttga
     1381 aggcattgct gagcaggcgt atgagatccc aaatattaga acatcatatg tgcgcgctga
     1441 ttttcatgta ccgatcgcag cgtggagatc ggtcacaagt tcaacacttg catttgcgca
     1501 agaatgtttt ttggacgagc tcgcaaataa agcaaagaaa gatccattgg agttccggtt
     1561 agaattactt tcaaaaccat ccgacgctaa aagggtttta cttaaactta aagaagtgtc
     1621 gaagtgggat acaccattgg ttgcaggcaa aggaagaggc gtagcgcaat gggaattttt
     1681 tgccggctta tgcgggcagg tggtggaagt gacatacaac gccgacaagt caatcaagat
     1741 cgacaaagtt tatgccgtca tcgatttggg cgaagtggtt aatccggata atgtaaaaaa
     1801 ccaggttgaa ggcgccatag tgatggcact tggagctgca acaaagcctg gcattacatt
     1861 taagaacgga aaagttgtgg aaggcaatgt ttacaacaac cagcttgtcc gcatgcatga
     1921 aacgccggac atcgaagttc atattctcgc agaaggagga aagataaaag gcgttggaga
     1981 accgggattg ccaccgtttg cacctgcctt aggtaacgca atttatgcag ccaccggaaa
     2041 acgcgtccgt aaaatgccgt ttgatcttcg aaacatttag atggtagcaa atcgacgaga
     2101 gaatgatcag cgctgcaaca ttccgtgaaa tggctctctc ttttccgcac acagaacaag
     2161 ttccgcattt tgaaaggatc gggtttaaga tcattgggag acgaatgttc tgtacttatc
     2221 tcgaaacaaa taacactgcg aatatttttc taacacccgc agaacaaaaa attttctgtg
     2281 aaattgacaa tgtaaatatt tacgccgttc caaataaatg gggcgaaaaa ggagcgacaa
     2341 ctttcgagct taatactgtc gcgaaagaaa ttataatgga agcgttgctg tctgcataca
     2401 acgtcgtgtt gaaaagaaag aaagggtaag aagtgaatag agctgtcgaa aaagttacat
     2461 tgcttggtga agtatttggc gttatccacg cggcaggcgt ttctccgtcg caagcttcac
     2521 cggaaaccat tcttaaagtt gacctatacg gaaccgcgtt agttctgcaa gaatttggaa
     2581 atgtgattgc aaacgatggc tcttgtgttg tcattgcatc ccaatcaggg catcgttacc
     2641 gccattatca attgagcaaa ataaagcgct tgctaccacg ccggttgaag aattgcttag
     2701 ccttccgttt cttcaacttg atcagataaa agattcgctt catgcttatc aactttcaaa
     2761 acgtggcaac tcattgcagg taatgagctg aagctgttcg gtggggaaaa cgtggtgcaa
     2821 gggtgaatac aattagtccc ggaattatta ttaccccctt gccaatgatg aattaaaagg
     2881 tccgcgtggt caaggatatc gcagga
//
LOCUS       DASQJI010000013         7388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1040, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000013 DASQJI010000000
VERSION     DASQJI010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7388
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VEV83_00480"
     CDS             complement(<1..674)
                     /locus_tag="VEV83_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK43611.1"
                     /translation="MKLVFILLLACCHCCLLSQPISKDTLYLLKPDRVFDGEQMHEGW
                     QVLVKNNKIIEVGNINAKNENAEVIELKGCTLLPGLIEGHSHLFLHPYNETSWNDQVL
                     KESNAERVARATVHARNTLFAGFTTVRDLGTEGAGYDDVGLKQAIQKGIIPGPRMLVA
                     TKAIVATGSYGPKEMKDEIDVLKGAAEADGVDALIKEVRTQIGKGADLVKLYADYRWG
                     INGEAEP"
     gene            807..2153
                     /locus_tag="VEV83_00485"
     CDS             807..2153
                     /locus_tag="VEV83_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HYK43612.1"
                     /translation="MKRILFAAFFFTTNNLFSQTLIQRDPEIEQMVKEVSPDSLRSYI
                     NTLVAFGTRNTLSTQTDPKRGIGAARNWVLRKFNEFAKQSSGRLTAIIDTTTLQPDGK
                     RVDTTLLLGNVMATLKGTNANDTRIFIISGHLDNMRSNVMDRTGDAPGADDDGSGTAA
                     VLECARIMSKHSFPATIIFVAVSGEEQGLLGSTYMANKAKKENWNIEAVLNNDIMGSN
                     NSNETNIIDNTKVRVFSEGLPAYETEKSATNIRTLGLENDGKARQLARYVKETGERYV
                     DNLQVVLIYRNDRFLRGGDHLPYVQDGFAAVRITEMDENYTRQHQDVRTENGIKYGDL
                     ADHIDLEYLRKNTALNLCNLANLAKAPGMPDSVKIEVKRLTNFTQLYWQAPKFGKPKG
                     YYVLMRETTSAFWQKKFFTTDTAMQLPYSKDNYFFAVQSVNEAGNESLPVVPDVAR"
     gene            complement(2268..3185)
                     /locus_tag="VEV83_00490"
     CDS             complement(2268..3185)
                     /locus_tag="VEV83_00490"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HYK43613.1"
                     /translation="MEDMINLSDLLKHEILDLYSAEEQIIDALPGMIEKASNGELKKA
                     LRQHLEVTKQQKNRLDQVKEWMGEGSENGKGNDKGFFSRMFSGNNGSGGEKCKAMEGL
                     IAEGEKMMSADASEEVCDAAIIASAQKIEHYEISGYGTARTYARELQLEDVARLLEQT
                     LNEEYQADDLLTRIATGRINLEAEAATEIDDNRSSKTSGGRKSANGKPSSSSTRVSSR
                     QGSEKTSGSERSKSSSNGKSNGRSSSSNNKKSSSAKNSSNKNGSSKSNRSASSSRSGS
                     KSQTSKGNKSSKRSSTNNKKQRSKSSASR"
     gene            complement(3301..3732)
                     /locus_tag="VEV83_00495"
     CDS             complement(3301..3732)
                     /locus_tag="VEV83_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYK43614.1"
                     /translation="MNYIRQVEIRWSDLDPNYHVRHSAYYDFGAYCRLAFLNDHGITP
                     EVMLSHSLGPVLFREECVFKREINFGDRVSIYLTLRQASPDFRKWTMVHELWKNETTL
                     AAVITVDGAWMNTQQRKIIAPPDIFKTAFEAIPKSDDFKII"
     gene            complement(3755..4159)
                     /locus_tag="VEV83_00500"
     CDS             complement(3755..4159)
                     /locus_tag="VEV83_00500"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HYK43615.1"
                     /translation="MNQPRTGLNNITPMPAKPHLKDPLNKHSFFEDVWDVARQIPKGR
                     VTSYGAIANYLGTKMSARMVGWAMNGASNVKPKVPAHRVVNRNGMLSGKMHFDTPDLM
                     QQRLEKEGIEVKKDKVVQFDKLFWDPAKELTL"
     gene            complement(4302..4502)
                     /locus_tag="VEV83_00505"
     CDS             complement(4302..4502)
                     /locus_tag="VEV83_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5522 domain-containing protein"
                     /protein_id="HYK43616.1"
                     /translation="MSKQLKDEDDDYYFNSGGLVVFTAEYLLERGYCCGNGCLNCPYD
                     YKNVPEPKRTELLKKRREGNGQ"
     gene            complement(4480..5187)
                     /gene="trmB"
                     /locus_tag="VEV83_00510"
     CDS             complement(4480..5187)
                     /gene="trmB"
                     /locus_tag="VEV83_00510"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HYK43617.1"
                     /translation="MGQKKLLRFEELKTFPNVLEYPTGIAGRWHEFFENSNPITLELA
                     CGKGEYALGLGRLYPAHNFIGIDVKGNRIWKGAKTALDQGLKNVAFLRTQIDKLTDYF
                     ATDEISEIWITFPDPQLRFSKMKKRLTHPKFLRLYKNIMRSNGSIHLKTDSPALYEFT
                     KAVIDLYHLQLVHDNDDLYAGEHINEVLKIKTHYEQLDIAQSNKVQYLAFRIDKALPK
                     EKDDQLKQLFREQATEG"
     gene            5441..6778
                     /locus_tag="VEV83_00515"
     CDS             5441..6778
                     /locus_tag="VEV83_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HYK43618.1"
                     /translation="MNIRVLILSLFICSSSSGQVVQDTTERLQIAGEMETTIQQMLHA
                     WYPQNMDTMYGGFLTEFTYDFKPTSNQNKFIVTQARHTWSTSKAAMRYPNVVYYKTLA
                     ANGYKFLHDVMWDKSYGGFYTMVDRKGNVIDSTKNAYGNAFGIYAVAAYCQLTNDPDA
                     VYFAQEAFMWLENHSHDRVHKGYYQHMQRDGTPIKRTATTPATAETGYKDQNSSIHLL
                     EAFTELYPVWQSAIVRERLYEMLLLIRDTMIGTKGYLTLFFQPDWTPVSISDSSDTYI
                     VQHHGLDYVSFGHNVETSYLLLEASHALGIENDTATLRIAKQMVDHALQNAWDDKLGG
                     FYDAGYYFKNKPGLTIISKEKNWWSQAEELNSLLMMSKLFPNDRNNYYDKFEQQWNYI
                     QTYMIDHTYGDWYANGTDIDPQIKTALKGQIWKGNYHQFRSMMNCVDRLKGEE"
     gene            complement(6797..>7388)
                     /locus_tag="VEV83_00520"
     CDS             complement(6797..>7388)
                     /locus_tag="VEV83_00520"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HYK43619.1"
                     /translation="GTFFTPISYMQSKVRLFGHPVHPMIVPFPIAFYTATLVCSIVYA
                     SNGNTFWLHVSFIANCSALVMAAVAVLPGLIDWLSIPELTDAKTTGLKHMVANVFTLG
                     LFTANAAVTYPKLDDPHPAVQSSIMLTGFGFLIMLYAGFKGWKMVQTHHIGIDAPSDA
                     EVPDEKNDVKNANEIFSETTATPKRGSGENQKSETV"
BASE COUNT         1981 a         1731 c         1605 g         2071 t
ORIGIN      
        1 ggctccgctt cgccgttgat cccccaacgg taatctgcgt acagctttac aagatctgcg
       61 ccctttccga tctgtgtacg aacttctttt atcaacgcat ccaccccatc agcttctgct
      121 gctcctttta gaacatcgat ctcatccttc atttcttttg gaccgtaact ccccgtagca
      181 acaatcgctt tcgtcgcgac aagcatgcgc ggtccgggaa tgattccttt ttgaatcgcc
      241 tgtttcaatc caacatcgtc gtaacctgcg ccctcagtgc ccaggtcccg aacggttgta
      301 aaccctgcga acaaagtatt cctggcatga acagttgctc ttgccacacg ttctgcgttc
      361 gattccttca gcacctggtc attccagctt gtttcattgt atgggtgaag aaataaatga
      421 ctgtgtcctt caatcaaacc cggcaacaat gtgcagcctt ttaattctat tacttcagca
      481 ttttcgtttt tcgcattgat gtttccaact tcaatgatct tattattctt tacgagcacc
      541 tgccaacctt cgtgcatttg ttcgccgtca aaaacgcgat ccggtttaag aagatacaat
      601 gtgtcctttg aaattggctg ggaaagtaga cagcagtggc agcaagcaag cagcagaata
      661 aaaacaagtt tcatattcaa cacggcgaat ttaattgaat atactaaacg tcgccgtgaa
      721 gaatttgctc gagcggcgat gatgaaagat cgcggaaact tagctttgag aacgaatttg
      781 tcaacctcat caaatttctt ctgttcatga aacgaattct ctttgcagcc ttctttttca
      841 cgacaaataa tttgttttcg cagaccctca ttcaaaggga tccggaaatc gagcagatgg
      901 taaaagaagt ttcacccgat tctctgcgat cctatataaa tacgcttgtt gctttcggta
      961 caagaaatac actcagcaca caaacggatc cgaagcgtgg aattggggcg gcgcggaatt
     1021 gggtgctgag aaagtttaac gagtttgcca aacaatccag cggcagactt acggctatta
     1081 tcgatacaac aactttacaa ccggatggta aacgcgttga cacaacattg ttgcttggaa
     1141 atgtaatggc gacgttgaaa ggaaccaatg caaacgatac gcgcatcttc atcatcagcg
     1201 gtcacctcga caacatgcgc agtaacgtta tggaccgaac gggcgatgca cccggcgccg
     1261 acgatgatgg cagcggaaca gccgcagttc tggagtgtgc aaggatcatg agtaagcatt
     1321 cctttccagc aactataatt tttgtggcag taagcggtga agaacaggga ttactcggtt
     1381 ctacttatat ggcaaacaag gcaaaaaaag aaaattggaa tattgaagct gtattaaata
     1441 atgacattat ggggagcaac aacagcaatg aaacaaatat tattgacaac acaaaggtgc
     1501 gtgtgttcag cgaaggattg ccggcatacg aaacagaaaa atcggccacg aatattcgga
     1561 cgcttgggct tgagaacgat ggcaaggcgc gacaactcgc ccgttatgta aaagaaaccg
     1621 gcgagcgtta tgtggacaac ctgcaagtgg ttttaatata ccgcaacgac aggttcctgc
     1681 gcggtggcga ccatctgccg tatgtacaag acgggttcgc cgcggtgcgc attaccgaga
     1741 tggacgaaaa ttatacccgc cagcaccagg atgtacgaac agaaaacgga attaaatacg
     1801 gcgaccttgc ggaccatata gatttagaat accttcgaaa gaacaccgcg ctcaatcttt
     1861 gcaacctcgc gaatttggcg aaagcaccag ggatgccgga ttccgtgaag atcgaggtga
     1921 agcgattgac caacttcaca cagctttact ggcaagctcc gaaattcggc aaacccaaag
     1981 gctactatgt gctcatgcgc gagaccacca gcgctttctg gcaaaagaag ttcttcacaa
     2041 ccgacacggc tatgcagctg ccttattcaa aagacaatta ttttttcgcc gtacaatccg
     2101 ttaatgaggc agggaacgaa agccttcccg ttgtcccgga tgttgcacga tgatcaaatc
     2161 aacgccggaa tcttcacgcc gaagttttca aacggcacga gccacagggc acaatcgagt
     2221 tactcgacat aaagattact tgaaccatga gttattatgc gagcctgcta acgagatgcg
     2281 ctgcttttgc tgcgttgttt tttgttattt gtggacgagc gtttgctgct tttgttgcct
     2341 ttcgaagttt ggctcttact tccggacctt gacgagctcg ctgagcgatt gcttttagat
     2401 gaaccgttct tgtttgatga attctttgct gacgaactct ttttattgtt tgaagagctg
     2461 ctcctgccgt tgctcttgcc attagaagag cttttgcttc tttcagaacc agacgttttt
     2521 tctgaaccct ggcgcgacga aaccctggtt gatgaggaag agggcttgcc gtttgcgctt
     2581 ttgcgtccac ccgaagtttt cgaagatcga ttatcgtcta tctcagttgc ggcttccgct
     2641 tccaggttga tacgaccggt agcaattctc gtgagcagat catcggcctg gtattcttcg
     2701 tttagtgttt gttccagcaa acgcgctaca tcttcgagtt gtaattctct tgcgtaggtt
     2761 cttgccgtgc catagccgga gatctcatag tgctcgatct tttgtgcaga agcgataatg
     2821 gcggcatcgc aaacttcttc acttgcatct gcagacatca ttttttcgcc ttcggcgatc
     2881 aagccttcca tcgctttgca tttctcgcca ccggaaccgt tgttgccgga gaacatccgc
     2941 gaaaaaaatc ctttgtcgtt tccctttccg ttttcgctgc cttcgcccat ccattctttt
     3001 acctggtcga ggcggttctt ctgttgtttc gttacttcaa gatgctgacg aagcgctttt
     3061 ttcagctcgc cattacttgc cttctcgatc atgcccggta aggcatcgat gatctgctct
     3121 tctgctgaat aaaggtcgag gatctcatgt ttcagcaaat cgcttagatt gatcatgtct
     3181 tccatagtgg tgtttttaaa gttaaaagaa taacctaaca gcattaaaaa ccatgcctga
     3241 tattggcact cgattgtaga ctgcagattg acgattgcag attgcaaaga cttcgtttag
     3301 tcagattatt ttaaaatcat ctgactttgg tatcgcctca aacgcagttt tgaagatgtc
     3361 gggcggtgca attatttttc gttgttgcgt attcatccag gctccatcaa cggtgatcac
     3421 cgccgcaagg gttgtttcat tcttccacaa ttcatgaacc atggtccatt tcctgaaatc
     3481 aggcgacgcc tggcgaagcg tcaaataaat cgaaaccctg tctccgaaat tgatttccct
     3541 tttaaaaaca cattcttctc taaacagtac cggtcctaaa gaatgactaa gcattacctc
     3601 cggggtgata ccgtgatcgt tcagaaaggc cagtctgcaa taggcaccga aatcgtaata
     3661 cgccgaatga cgcacatgat aattaggatc caggtcgctc cacctgatct cgacctgcct
     3721 tatataattc atcttgtaga aattgcaacg aattttatag agtcaattct tttgccgggt
     3781 cccaaaataa cttgtcaaac tgtaccacct tgtctttttt cacttcaatt ccttcctttt
     3841 ccaggcgctg ttgcataaga tccggtgtat cgaaatgcat cttcccgctg agcatgccgt
     3901 tcctgtttac cacgcggtgc gccggaactt ttggtttcac gttcgatgcg ccattcatcg
     3961 cccagcccac catgcgggcc gacattttcg tacccaggta attggcgatc gctccgtagc
     4021 tggtaacccg tccctttgga atttgacgag ccacgtccca aacatcctca aagaatgaat
     4081 gtttgttgag aggatctttt aaatgtggtt ttgcaggcat cggtgtaatg ttgttcaacc
     4141 ccgttcgggg ttggttcatc gcgcttattt tgcaatcccg gatttcatcc ggggctaatg
     4201 aagttaaatc cctccgggct tttgtgccat ttataccttt gaacgaagaa acgctacgga
     4261 atgggagagc cattcacaat tgaccactca cattcaagac gctactgacc gttcccttcc
     4321 ctcctcttct tcagcagctc cgttcttttc ggttcaggaa catttttata atcgtacgga
     4381 caattgaggc atccgttacc gcaacaatat ccgcgctcca aaagatattc ggctgtgaac
     4441 acaacaagtc cgccgctgtt gaaatagtaa tcgtcatcct catccttcag ttgcttgctc
     4501 acgaaatagt tgttttaatt ggtcgtcttt ttcttttggc aatgctttgt ctatccgaaa
     4561 agcaaggtac tgcactttat tgctctgcgc aatgtccagt tgttcgtaat gtgtttttat
     4621 tttcagtact tcatttatat gctcgccggc atacaggtca tcgttatcgt gaaccaactg
     4681 aaggtgataa agatcgataa ccgctttcgt gaattcatac agtgcggggc tatcagtttt
     4741 caaatggatg ctgccattcg atcgcatgat atttttatac aacctcaaaa atttgggatg
     4801 ggttaatctt ttcttcattt tggaaaaacg caattgcgga tcagggaatg tgatccagat
     4861 ttcactgatc tcatctgtag caaaataatc tgtaagctta tcgatttgtg ttcgcaggaa
     4921 tgctacattt tttaagcctt gatcgagcgc agtctttgct cctttccaaa tgcggttacc
     4981 tttaacgtcg ataccaataa agttatgtgc cggatataat ctgcccaggc ctaatgcata
     5041 ttcgcccttg ccgcaggcga gttcaagtgt gatcggattt gaattttcaa aaaactcatg
     5101 ccatctacca gctatgccgg ttggatattc caaaacattt ggaaacgttt ttagttcttc
     5161 aaatcgcaat agtttctttt ggcccatcgg tacaaaacta agagagaaac gaaattcatg
     5221 ctttgcttaa ctttaggaac atctaccagg atttattgaa ccacacaggc acatcgaaac
     5281 atagagattt cacacagtga agactttcgc acacttcaac catatgagaa cttcaatcga
     5341 ctgtcgccta tcttgcgcct attgcggtct aaatgtgata gggttcaaaa aaaagtaata
     5401 ggttcaaccg cgcaaactaa aaagtatcga tatttcaatt atgaacatta gagttctcat
     5461 cctctcattg tttatctgct caagctccag tggacaggtc gtgcaggaca caaccgaacg
     5521 cctccagatc gccggtgaaa tggaaactac gattcaacaa atgcttcatg catggtatcc
     5581 tcaaaacatg gatacgatgt atggcgggtt cttaactgaa ttcacatatg atttcaaacc
     5641 aacatcaaat caaaacaaat tcattgtcac ccaggcgcgg cacacatggt caacatcaaa
     5701 agcggcgatg agatatccga acgttgttta ttacaaaaca ctcgcggcaa atggctataa
     5761 gtttttgcac gacgtgatgt gggataaaag ttatggcggt ttttatacga tggtcgacag
     5821 gaagggcaat gttattgatt caacaaagaa cgcttatgga aatgcattcg gcatttatgc
     5881 ggtcgcggca tattgtcaac tgacaaacga tccggatgcc gtttattttg cgcaggaagc
     5941 ttttatgtgg ctggaaaacc acagccatga tcgggtgcat aaaggctatt accagcacat
     6001 gcagcgcgat ggcacgccaa taaaaagaac tgcaaccaca ccggccactg cagaaacggg
     6061 gtataaagat caaaacagct ccattcattt gctggaggcg ttcacagagt tgtatcctgt
     6121 ttggcaaagc gcgattgtcc gcgaacgttt atacgaaatg ttactgctca tacgagatac
     6181 catgatcggc accaaagggt accttacgct attctttcag ccagattgga cacccgtttc
     6241 tatcagcgat tcttctgaca catacatcgt gcaacatcac ggacttgatt atgtttcctt
     6301 tgggcataat gtagaaacga gctacctgct gcttgaggca tcgcatgcat taggtatcga
     6361 aaatgataca gcaactttgc gcattgcaaa gcaaatggtt gatcatgctc tgcaaaatgc
     6421 gtgggacgat aaattgggcg gattttacga cgcaggttac tatttcaaaa acaaacccgg
     6481 gcttactatt atcagcaaag aaaagaactg gtggtcgcag gcagaagaac tcaattctct
     6541 tctcatgatg agtaaacttt ttccaaatga tcgcaacaat tattatgaca aattcgaaca
     6601 gcagtggaac tatattcaaa cgtacatgat cgatcacact tacggcgact ggtacgcgaa
     6661 cggcaccgac atcgatccgc agatcaaaac tgccttaaag ggacaaattt ggaaaggcaa
     6721 ttatcaccag ttccgttcaa tgatgaattg cgtggacagg ttgaagggag aggagtgagt
     6781 tgcccctgtc tccgagctat actgtttcgc tcttttgatt ttcccctgag cctctttttg
     6841 gtgtagcagt cgtctcagaa aatatttcat ttgcattttt cacgtcattt ttttcatccg
     6901 gtacctcagc atctgatgga gcatcgatac cgatatgatg ggtctgcacc attttccatc
     6961 ctttaaatcc tgcgtataac ataatcaaaa aaccgaaacc cgtcagcata atactcgact
     7021 ggactgccgg atgagggtca tcgagtttcg gataagtgac agctgcgttt gcagtaaaca
     7081 gtcccaaagt aaaaacgttt gcgaccatat gttttaatcc ggtcgttttc gcatctgtaa
     7141 gttcggggat tgacagccag tctatcaatc cgggcagcac ggccactgcc gccattacga
     7201 gtgctgagca gttcgcgatg aatgaaacat gcaaccagaa tgtatttccg ttagaggcgt
     7261 aaactattga gcaaacaagc gtggcggtat aaaacgcaat gggaaaaggg acgatcatag
     7321 ggtgaacagg gtggccgaat aatcttactt tgctctgcat gtaagaaatc ggcgtaaaaa
     7381 atgtgcca
//
LOCUS       DASQJI010000014        10847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2919198,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000014 DASQJI010000000
VERSION     DASQJI010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10847
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919198"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VEV83_00525"
     CDS             complement(<1..209)
                     /locus_tag="VEV83_00525"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK43620.1"
                     /translation="MKKVFLFVCATLTLAAMASAQSLHIGAKAGANMNKIDGQSFKQG
                     YELGYQLGGYVELNFNKNWGIQPELL"
     gene            complement(413..805)
                     /locus_tag="VEV83_00530"
     CDS             complement(413..805)
                     /locus_tag="VEV83_00530"
                     /inference="COORDINATES: protein motif:HMM:NF025494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4296 domain-containing protein"
                     /protein_id="HYK43621.1"
                     /translation="MNLRLPMLSCLVCFFSCTPEDQKIPPEIMSIDSMKVIIWDMTLA
                     SEYASHQKELDTARKPVNTAYFTEVLNTHHIDKSTFTRSFDFYQAHPALNKILWDSIT
                     IYAQRQRPQIYRPGQKAKIDSLRRTQPL"
     gene            complement(802..1734)
                     /locus_tag="VEV83_00535"
     CDS             complement(802..1734)
                     /locus_tag="VEV83_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4835 family protein"
                     /protein_id="HYK43622.1"
                     /translation="MLKKYLPNILILSAALITNLSSQAQELQGKVTVLAQQVGGSVDR
                     TVFTNLQNQLTNFITHRKWTSDVFQPQERIRCNFLLNIQSVDDNNVYQATLSVQAARP
                     VYNSSYQTALINCQDPDVDFRYVNFQSLEFNENRVQGTDALAANLTAIFAYYVYVILG
                     FDYDSFSPKGGEQFFQKAQNIVNNAPESKDISGWKSFDGARNRYWLAENLMNSRYNNF
                     HDIIYSYYRDGLDNMYQNSEDARSNILDALEQLQDFNQQNPNTMIAQFFVQGKSDEYI
                     GIFKKGNPQERTQASQILSVIDVSNAGNYKQELK"
     gene            complement(1727..2923)
                     /gene="coaBC"
                     /locus_tag="VEV83_00540"
     CDS             complement(1727..2923)
                     /gene="coaBC"
                     /locus_tag="VEV83_00540"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HYK43623.1"
                     /translation="MLKGKKILLGITASIAAYKAILLVRLLVKHGADVKVIMTPAAKD
                     FVSPLVLSTLSKNKVLIGLSEDDAWSNHVMLGRWADVMLVAPLSCNTLAKMATGQCDN
                     LLLAVYLSATCPVVLAPAMDEDMWHHSATKRNLRTVKEFGNLIVDVDTGELASGLYGP
                     GRMAEPENLFLFLIENFFRREELKSKKALITAGPTYEPLDPVRFIGNHSSGKMGFALA
                     EALYERGADVTIVTGPTQQQKKYKGINIVQVSTADEMYDACIKLHSHMNIEVMSAAVA
                     DYKPANVSPEKIKKQKNDVTLTLEKTKDILAALGQDKKNGQFLAGFALETNNERDYAK
                     NKLKAKNADMIILNSLRDENAAFGYDTNKVSIFFADGTEKQLALAAKKEIADQIVDLI
                     IQKLDA"
     gene            complement(2978..3319)
                     /locus_tag="VEV83_00545"
     CDS             complement(2978..3319)
                     /locus_tag="VEV83_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HYK43624.1"
                     /translation="MSKLRRQLSANTPNIVETKNLVDIKAKTGNLYESIAIVGKRANQ
                     INIALKEELHNKLEEFASHTDSLEEIHENKEQIEISKAYEKMPNPAILATQEFMENKI
                     YYRKNDDDLFR"
     gene            complement(3288..4124)
                     /gene="bamD"
                     /locus_tag="VEV83_00550"
     CDS             complement(3288..4124)
                     /gene="bamD"
                     /locus_tag="VEV83_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HYK43625.1"
                     /translation="MKFLGIILSLVLLASCTSKFGKVLKSKDKEYKLKMAEQYYANKD
                     YDKAQQIYTDILPLFKGDPRFEDIYYKYANTAYNQKDYLNAENLFKMYSENFPNSERV
                     EDAEYMRCMAYYKQSPKVDLDQTNTAKTIALLQAYINTHPDSKRVKDATDIIDQCRKK
                     LETKEYKNAQLYYDLGFFKAASVAFNVLMDDFPDSESGDMYALSSIKSYYRYAENSIT
                     DKQEERFEKVISQVDDFTERFPDSKLMADANNFKTQSENNLRKIQNQTQNNEQTKATT
                     QR"
     gene            4305..4940
                     /locus_tag="VEV83_00555"
     CDS             4305..4940
                     /locus_tag="VEV83_00555"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HYK43626.1"
                     /translation="MKQLFLLVCLVPMTLVSLYAQSSGDDAQKILDRASSKLRSAKGI
                     TTNFSLTQKDKSNHLQGTAKGVVKIKGNKYYVKEGDNQVFCNGSQQWNFNGRDEVTVS
                     KADNSDPDDLSPQQILSGFSKTDFTSKLISSSGTNYQILLTPIDKRKNFKQVTIFVSK
                     SSNLITKALIIDKSDNKIEITFSNVNLNATLADSEFSFDAKKHPGVEVINQ"
     gene            4981..5691
                     /gene="cmk"
                     /locus_tag="VEV83_00560"
     CDS             4981..5691
                     /gene="cmk"
                     /locus_tag="VEV83_00560"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HYK43627.1"
                     /translation="MREKIVITVDGYSSCGKSTLAKQIARELHYTYVDSGAMYRAITL
                     YFLRNSIGPSDLKKINTSLKNIELSFVYHPISGTSDMHLNGENVETLIRDMIISEKVS
                     EVAAIKEVRAFALVRQRELGVKKGIVMDGRDIGTTVFPHAELKIFMTADIAVRVERRF
                     KELFAVNKNITIEEVRDNLEMRDYIDTNREVSPLRKAKDALVLDNTDLTMAQQLKLAL
                     QWAHERVAGLNSKIKVAE"
     gene            5710..6276
                     /locus_tag="VEV83_00565"
     CDS             5710..6276
                     /locus_tag="VEV83_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43628.1"
                     /translation="MHDIEPFYNWRHIYTAEEDPKSPFYGRVYSEFEFSQAIYNYYIH
                     PQWDEFGSKTLYLKIIYVDYELAYAVIEMIGEWNDAIENDIMSLKRDVIDFLMRTGIS
                     KFILITENVLNFHSGDKDYYQEWFEENNENKGWVVALNMSEAAQYDFKRKKLNNYIEL
                     INLPDWRIYKPYHLFRKIDSMLNMRLHD"
     gene            6526..6723
                     /locus_tag="VEV83_00570"
     CDS             6526..6723
                     /locus_tag="VEV83_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43629.1"
                     /translation="MKQELNSSKVYLEQEELDRLCIEVKEVVATDIAIQPASKQAFGL
                     ADLWNIQRMRKEHQRRPTLWN"
     gene            complement(6758..7939)
                     /locus_tag="VEV83_00575"
     CDS             complement(6758..7939)
                     /locus_tag="VEV83_00575"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43630.1"
                     /translation="MHRSFRKILVLLILFLSLFKAAHASDTVYAPVRVAVLVPLYLDS
                     AFNGYEYHLSNTKIPQFFLSGLEFYNGVMMAVDTLQKRGANLDVWIYDTHKAGANMQT
                     IMSELQPMNFSMIIASLSNSAEQKAVSDFSAKNSVPVISATFPNDAYLNYNPFFVMVN
                     STWKTHIDAIYNFLERNYRGKEIIYLTRRGSLEDKIMQELQGMNADRAVTFFNIVLND
                     EFSDNDVLSHLDSTRDNIVVCGSLNESFGKAIIKTLNANGESYSSVLIGMPTWNGMTG
                     TSGNACNHIQIVITTPYNYLRDKTSLTYLSENYRANYYARPSDMVFKGYETMYHFTNL
                     LLQYPQNFISRLSDNSFKVANDYNFEPVRLSKTSFVPDYVENKKIYFIRIINGDVQSV
                     E"
     gene            complement(7971..9506)
                     /gene="guaA"
                     /locus_tag="VEV83_00580"
     CDS             complement(7971..9506)
                     /gene="guaA"
                     /locus_tag="VEV83_00580"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HYK43631.1"
                     /translation="MTEKILVLDFGSQYTQLIARAVREANVYCEIIPYHQSFTIDETL
                     KGVILSGSPFSVNEANAPSANIPAFIEKIPVLGVCYGAQLTVKEFGGIVEKSNKREFG
                     RARLHKQKDDILLADVVDESQVWMSHSDTITRLPQGFELLATTGSIPVAAFYKHQNGT
                     KPLYGLQFHPEVYHSTEGKKIIRNFLVNICGCQQNFTPASFINETVDKLRQQIGDAHV
                     IMALSGGVDSTVAATLISKAIGERLHGIFVDNGVLRKNEFESVLHTYKDLHLNVRGVD
                     AKQQFYDALEGKVDPEEKRKAIGRTFIDVFQHEALTLKEVKFLGQGTIYPDVIESMSV
                     HGPSMTIKSHHNVGGLPDTLHLSLVEPLRFLFKDEVRKVGLELGIPADMVNRHPFPGP
                     GLAIRILSDVTDEKVKLLQEADDIFISSLKEKDLYNQVWQAAAILLPVKSVGVMGDER
                     TYEYTIALRAVTSVDGMTADWAHLPYEFLAHVSSDIINNIRGINRVVYDISSKPPSTI
                     EWE"
     gene            complement(9588..10487)
                     /locus_tag="VEV83_00585"
     CDS             complement(9588..10487)
                     /locus_tag="VEV83_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK43632.1"
                     /translation="MVKYLTAICCLLAVFTDAQKTDEKLEKKITELLKGFHGDVGVYV
                     RDLKHNRIVEINADTVFPTASIVKIPILIGIMDKIQKGELDYHQRLLYTDSLFYDEGD
                     DILSRFKDSSSIELSKVMMLMLTISDNCASLWLQGLAGGGARINAILDSLGYKYTRVN
                     SRTPGREEIREVYGWGQTTPGEIAVIMESVVNGNMLSKASSEKMLRLLSRQYWDEEAL
                     SQIPPGVFVADKNGAVDESRNEVVYVNSKENPYIFSIFTKNNSDTTWEPTNEAWVLTR
                     KLSALLWSYFNPKSDWTAAQAVK"
     gene            10616..>10847
                     /locus_tag="VEV83_00590"
     CDS             10616..>10847
                     /locus_tag="VEV83_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HYK43633.1"
                     /translation="MKKIAVIPARYASTRFPAKLMQMLGDKTIIRTTYENTVSTGLFD
                     EVLVVTDSELILNEINQFGGNAVMSKRAHESGT"
BASE COUNT         2941 a         2455 c         2276 g         3175 t
ORIGIN      
        1 agaagttccg gctgaatacc ccagttcttg ttgaaattca gttccacgta gccgcctaat
       61 tggtaaccaa gttcataacc ttgtttaaac gattgtccgt caattttatt catgttagca
      121 cctgcttttg cgccaatgtg caaggattgc gctgaagcca tcgcagcaag ggttagcgtt
      181 gcacatacga acaaaaaaac ttttttcatt tggtaaaatt tttgattttt taatagctaa
      241 aaaaataatc ggtcacactc tgactcgcca tttgtgaaaa tgttacgcga gcaacagaaa
      301 aatttcttta gataattact tttagccgtg acgttgattt tgatttgcca attgttgtgc
      361 cagtgttcaa accaaaaacg agcagcgcgg atcgatattg tttaataaaa acttaaagcg
      421 gctgtgtacg acggagcgaa tcgatctttg ctttctggcc tggcctatat atttgtggcc
      481 gctgcctttg tgcataaata gttatcgagt cccacagtat tttatttagt gcagggtgag
      541 cctggtaaaa atcaaagctg cgcgtaaaag tgcttttatc aatgtgatgc gtatttaaaa
      601 cttcggtgaa gtaagcggta ttgaccggtt tacgggcggt gtccagttct ttctgatgcg
      661 acgcgtactc actagccagc gtcatatccc aaatgatgac tttcattgaa tcgatcgaca
      721 tgatctcggg cggaattttt tggtcttccg gcgtacagga aaaaaaacac accaggcagc
      781 taagcattgg caggcgtaaa ttcattttaa ctcttgttta taattgcctg cgttggaaac
      841 atcgatcacg gacagaattt gggacgcctg cgtgcgctcc tgtggatttc ctttcttaaa
      901 tatgcctatg tattcatcgg atttcccctg tacaaagaac tgggcgatca tcgtgtttgg
      961 gttttgttga ttgaagtcct gcagctgctc caacgcgtca aggatatttg accgggcgtc
     1021 ttcactgttc tggtacatat tgtcaaggcc gtcgcgatag tagctgtaaa tgatatcgtg
     1081 aaaattgttg tacctcgaat tcatcaaatt ttctgctaac caataccggt tccgcgcgcc
     1141 gtcaaaagat ttccagccgc ttatatcttt agattctggt gcgttattca cgatattttg
     1201 cgctttctga aaaaattgtt cgccgccttt tggtgaaaac gaatcataat cgaagcccag
     1261 gatcacatac acataatacg caaatattgc cgtgagattt gcggcaagcg catcggttcc
     1321 ctgcaccctg ttttcgttga attccagcga ttgaaagttt acgtagcgaa aatcaacatc
     1381 cgggtcctgg caatttatca gagcggtttg atacgacgaa ttataaaccg ggcgcgcggc
     1441 ctgcaccgat aatgttgcct ggtaaacgtt attgtcgtcc acactttgaa tattgagtaa
     1501 aaaattgcag cggatccttt cctgcggctg gaatacatcg ctggtccatt tacggtgcgt
     1561 gataaagttc gtgagttgat tttgaaggtt cgtgaacacc gttctgtcaa cactaccacc
     1621 aacctgttgc gccagtacgg tcactttgcc ttgcagctcc tgcgcctgcg aagagagatt
     1681 tgtaattagc gcagccgata ggataagaat attcggtaaa tactttttaa gcatccaact
     1741 tttgtataat caggtcaaca atttgatcag cgatctcctt ttttgcagcg agggcgagtt
     1801 gtttctccgt tccgtctgca aagaaaatgg aaactttgtt tgtatcatat ccaaaggctg
     1861 cgttttcatc acgcagtgaa ttcaagatga tcatatcggc attcttggcc ttcaatttgt
     1921 ttttcgcgta gtcgcgttca ttgttggtct ccaacgcaaa tcccgctaag aattgcccgt
     1981 tttttttgtc ttgacctaat gccgcgagaa tgtcttttgt tttctcaagc gtaagcgtaa
     2041 cgtcattctt ttgctttttt attttttccg gcgatacgtt ggcaggctta taatcggcaa
     2101 cggccgccga catcacttca atgttcatgt ggctatgcag tttaatgcac gcatcataca
     2161 tttcgtcggc ggttgacacc tgcacgatgt ttattccttt atattttttt tgctgctgcg
     2221 taggcccggt tacgatcgtt acatccgcgc cccgttcata caatgcctca gccagcgcaa
     2281 aacccatttt ccccgatgag tggttaccga taaaacgaac cggatcgagc ggttcgtatg
     2341 ttggcccggc agttatcaac gcctttttgc ttttcaattc ttcgcgcctg aaaaagtttt
     2401 ctatcaaaaa caaaaaaagg ttctccggtt cagccatgcg gccgggtcca tatagcccgc
     2461 ttgccagctc acccgtatca acgtccacga tcaggtttcc aaattctttt accgttcgaa
     2521 gatttctttt tgtagcagaa tgatgccaca tgtcttcatc catagccggc gccagcacca
     2581 ccgggcatgt cgcggaaaga tatacggcaa gcagaagatt atcacactgc ccggtcgcca
     2641 tcttcgcaag tgtattacaa ctgagcggcg caacaagcat cacatcggcc caacggccga
     2701 gcataacatg gttgctccac gcatcatcct ctgagagacc gataagcact ttgtttttgg
     2761 aaagcgtaga caggacaagc ggagaaacga aatccttagc agccggcgtc atgatgacct
     2821 ttacatctgc gccatgtttt acaagcaagc gtaccagcag gatcgcttta tacgccgcta
     2881 tgcttgctgt aatgccaagt aatatttttt tgcctttaag catttctcaa aacaaaaaat
     2941 cccgcgaacg cgggattaaa attaagtctt acgccgctta acggaaaaga tcgtcatcgt
     3001 ttttacgata atagatcttg ttctccataa actcctgcgt tgccaggatt gccgggttag
     3061 gcatcttctc atatgccttt gatatctcga tctgttcctt gttttcatgg atctcttcga
     3121 ggctgtctgt gtgactggca aactcttcga gcttattgtg caattcctct tttagagcaa
     3181 tgtttatctg gtttgccctt tttccaacga tcgcgataga ttcataaagg tttccggtct
     3241 tagcctttat gtcgacaaga ttttttgttt caacaatgtt cggcgtatta gcgctgagtt
     3301 gtcgccttag tttgctcatt attttgagtt tgattttgaa tttttcgtaa attattttct
     3361 gattgtgttt tgaaattatt tgcgtctgcc atcagcttgc tgtcagggaa acgctcggta
     3421 aagtcatcaa cctgcgagat caccttctca aacctttcct cctgtttgtc agtaatgctg
     3481 ttctctgcat acctgtaata agattttatt gaacttagcg catacatatc accgctttcc
     3541 gagtcgggga aatcatccat cagcacattg aacgcaacgc tcgcagcttt aaaaaaaccc
     3601 aggtcgtaat atagctgcgc atttttatat tcttttgttt ccagtttttt cctgcattga
     3661 tcaattatgt cagtagcgtc tttcaccctt tttgaatcag gatgtgtgtt gatataagcc
     3721 tgcaacaatg caatggtttt cgccgtattg gtctgatcca ggtccacttt cggtgattgt
     3781 ttgtaatacg ccatacagcg catgtattcc gcgtcttcta ccctttcgct gttgggaaag
     3841 ttttccgagt acattttaaa aaggttctca gcgttcaggt aatccttctg gttatacgcc
     3901 gtgtttgcat atttataata tatatcctca aaacgcggat ctcctttgaa caaaggcaat
     3961 atgtcggtat atatctgctg agccttgtcg taatccttgt tcgcatagta ctgctcagcc
     4021 attttcagct tatattcttt gtccttgctc ttcagcacct tcccgaattt agacgtgcag
     4081 gaagcgagta gaacgaggct caaaattatt cccaggaatt tcataaagcg cgcaaagata
     4141 atttattcgg gcaaattagt cataaccgcg ctcgaagaag ggcgacgagc gttaataaaa
     4201 ataaaaatat cagcgtttcg tgttaagtaa tctgctggaa ataaacgctt tcattttaaa
     4261 caagtcgaat ttcgcgatct aaatgatcct gttaaaaatc tttcatgaaa caactttttc
     4321 tcttagtgtg ccttgtacca atgacgctgg taagccttta cgcgcagtcc agcggtgacg
     4381 acgcccaaaa gatcctcgat cgggcatcct caaaacttcg ttccgcgaaa ggaattacta
     4441 caaatttttc gctgacgcaa aaagataagt cgaatcatct gcagggaact gcaaaaggcg
     4501 tcgttaaaat aaagggtaat aagtattacg taaaggaagg cgacaaccag gtgttttgca
     4561 acggcagtca acaatggaat ttcaatggcc gcgatgaggt aactgtgagc aaggcagata
     4621 acagtgatcc agatgatctt tcacctcagc agatcctgtc aggatttagt aaaaccgatt
     4681 ttacttccaa acttatttct tcatctggca caaattatca aatattgctc acgcccattg
     4741 acaagcgaaa aaattttaaa caggtcacga tcttcgtcag caaatcaagc aacctcatca
     4801 cgaaggcttt gatcatcgac aaatcagaca acaaaattga gatcaccttt tcaaacgtta
     4861 acctcaatgc gacgcttgca gacagtgaat tcagttttga tgcgaagaaa catccgggcg
     4921 ttgaagtgat caatcaataa acttctttct ccttttaaaa tttttactca gctttgctgc
     4981 atgagggaaa agatcgtaat caccgttgac ggatattctt cctgcggcaa aagcacattg
     5041 gcaaaacaaa ttgcgcggga gctgcattac acctacgtag acagcggtgc gatgtacagg
     5101 gcgatcaccc tgtatttttt gcggaattcg atcggccctt cagacctgaa aaaaataaat
     5161 acctccctga aaaatataga gctctcattt gtttatcacc ccatctccgg cacgagcgac
     5221 atgcatctaa atggcgaaaa tgttgaaacg ctcatccggg atatgatcat cagtgaaaag
     5281 gtgagtgaag tggctgcgat aaaagaagtg cgggcgtttg cgcttgtcag gcagcgggaa
     5341 ctgggcgtaa aaaaagggat cgtgatggat ggcagagata ttggtaccac cgtttttcca
     5401 catgcagagc tgaaaatttt tatgacggcg gacattgcgg ttagagttga acgacgattt
     5461 aaggaattat tcgcagtgaa taaaaatatc accatcgaag aagtgaggga taatcttgaa
     5521 atgcgtgatt acatagatac caatcgcgaa gtaagcccgt tacgaaaagc aaaggacgcc
     5581 ctggttcttg ataacaccga tcttactatg gcacagcaat tgaaactagc tttacaatgg
     5641 gcgcatgaaa gagttgccgg ccttaacagt aaaataaaag ttgcagagtg aaaaaagtga
     5701 cgaagatgta tgcatgatat agagccattt tataactgga gacacattta tacagccgaa
     5761 gaagatccaa agtcaccgtt ttatggccgg gtgtatagtg aatttgaatt ttcgcaggcc
     5821 atctacaact attatataca cccgcaatgg gacgaattcg gcagcaaaac gctatatctt
     5881 aagatcattt acgttgacta tgaattagct tatgctgtaa tagaaatgat cggtgaatgg
     5941 aatgacgcga tcgagaatga cattatgagt ttaaaaagag atgtcatcga tttcctgatg
     6001 cgtacgggga tttccaaatt tatcctgata acagaaaatg tgctcaactt tcacagcggc
     6061 gacaaagact actaccagga atggttcgag gaaaataacg aaaacaaagg gtgggtcgtc
     6121 gctctgaaca tgagtgaagc tgcgcagtat gatttcaagc gcaaaaagct aaacaactat
     6181 atcgaattga tcaaccttcc cgattggcgc atttacaagc cgtatcacct tttcaggaag
     6241 atcgacagta tgctgaacat gcgtttgcat gactagcgtt acgctggaat atattagcgc
     6301 ttatataata accaggatac tgatattaag ctttcattta ggattttctc ttgcttctta
     6361 accgcatagt ccctaccttt gcggcaccaa tttggaaatg atcatctcct tcccggtaaa
     6421 acccacgctg cgcgttttta ctgatgtttg cctgccatct gaataaattc ataacacgct
     6481 tttgtttgcc attgaagatt tttattaaca gacaaaaagt gtaatatgaa acaggaatta
     6541 aacagttcaa aagtttatct tgaacaggaa gaattagaca ggctctgcat cgaagtgaag
     6601 gaagttgtgg caacggatat tgcaattcag ccggcgtcaa agcaggcgtt cggattagct
     6661 gacctttgga atatccaacg aatgagaaaa gagcaccaaa gaagacctac tctttggaac
     6721 tgatataatc aacggggcgg taatcactgc ccctttttta ttccacagat tgtacgtcgc
     6781 cgtttatgat gcggataaaa taaatctttt tgttctcgac gtaatcaggc acgaacgaag
     6841 tctttgaaag ccttaccggt tcgaaattgt aatcatttgc aactttaaac gaattgtctg
     6901 aaagcctgct gataaaattt tgaggatatt gtaaaagcaa attagtaaag tggtacatgg
     6961 tttcatagcc tttaaaaacc atatcgcttg gccgcgcgta ataattcgcc cggtaatttt
     7021 ctgataaata tgttaggctt gtcttatcac gcaaataatt ataaggcgta gtgatcacga
     7081 tctggatgtg attacatgcg ttccctgatg tgccggtcat cccgttccac gttggcatgc
     7141 cgattaaaac tgatgaatag ctctcaccat ttgcgttgag ggtttttata attgccttgc
     7201 cgaaactttc gttcaagctt ccgcagacaa caatattatc acgagtactg tcgaggtgag
     7261 acagcacatc attatcagaa aactcatcgt tcagcacaat attgaaaaat gtaactgccc
     7321 tgtccgcatt catcccctgc aactcctgca tgatcttgtc ttccagagag ccccttcgcg
     7381 tcaaataaat tatttctttg ccccggtaat ttctttccag gaaattgtat atggcgtcaa
     7441 tatgcgtttt ccaggttgaa tttaccatta caaagaacgg gttgtagttg agatacgcat
     7501 cgttcggaaa cgtcgctgag atcaccggta cgctgttctt tgcagaaaag tcactcacag
     7561 ctttttgttc ggctgaatta gacaaagaag cgatgatcat cgaaaaattc atcggttgta
     7621 attcgctcat gatcgtctgc atgtttgccc ctgctttatg cgtgtcgtat atccaaacgt
     7681 ccaggtttgc gccgcgcttt tgtaaagtat ctacagccat catcacgccg ttgtaaaact
     7741 ccaatccgga caaaaaaaat tgcgggattt tggtgttgct gagatgatat tcgtaaccat
     7801 taaacgccga gtcgagataa agcggtacaa gaaccgccac acgtaccggt gcatacacgg
     7861 tgtctgaagc gtgtgcggct ttaaaaaggg agagaaataa aatgagcagg actaaaattt
     7921 tccgaaagga tctgtgcata aacgtggtaa ggaagacaca aatttaatgc ctattcccac
     7981 tcgatagtgg aaggtggctt actgctgata tcgtagacaa cgcgattaat cccgcgtata
     8041 ttgttgatga tgtcgcttga aacatgtgca agaaattcgt acggtagatg cgcccagtct
     8101 gcagtcatgc catcgacaga cgtaactgcc cgcaatgcga tcgtatattc ataggttcgc
     8161 tcgtcgccca ttacaccgac gctttttacc ggcaacaaaa tagcggcggc ctgccacact
     8221 tgattataca ggtccttttc ttttaaagaa ctgataaaaa tatcatctgc ctcctgcagg
     8281 agcttgacct tttcatccgt tacatcactc agaattctga tggcaagacc ggggcccgga
     8341 aacggatggc gattgaccat gtctgcagga attccgagtt ccagtccaac cttgcgcact
     8401 tcatctttga ataagaatcg caaaggctca actaaggata aatgcagcgt gtcaggcagc
     8461 ccgccaacat tgtgatgcga cttgatcgtc atggacggtc cgtgcacgct catactttca
     8521 atgacgtccg gatatatagt gccttggccg agaaatttta cttctttgag agtcaacgct
     8581 tcatgctgaa atacatcgat gaatgttctt ccaatcgctt ttcgtttctc ttcaggatct
     8641 actttgcctt cgagcgcatc gtagaattgt tgttttgcat cgacccctct tacattcagg
     8701 tgcagatctt tataggtatg cagcaccgat tcaaattcat ttttccgcaa cactccattg
     8761 tccacaaaaa ttccatggag cctctcgccg atagctttgc tgatgagcgt cgcggccacc
     8821 gtgctgtcaa cgcctccgct caatgccatt atcacatgcg catctccgat ctgctgacgc
     8881 agtttatcta cggtttcatt aatgaacgac gccggtgtga aattctgttg gcatccacaa
     8941 atattaacca ggaaattccg gatgatcttt tttccttcag tggagtgata aacttccgga
     9001 tgaaactgta aaccatacag cggctttgtt ccattctgat gcttataaaa tgccgccaca
     9061 ggtatcgagc ccgttgtagc cagcaattcg aagccctgcg gcaatcttgt aatggtatcg
     9121 ctgtggctca tccacacctg gctttcatcc accacatcgg ccaataatat gtcatctttt
     9181 tgcttgtgca gccttgcgcg gccaaattca cgcttattcg atttttcaac tattcctcca
     9241 aattccttca cagttaactg cgccccgtag caaacgccaa gcaccggaat tttttctatg
     9301 aacgccggaa tatttgcgga aggcgcattt gcttcattca cgctgaacgg agagccgctg
     9361 agtataacgc ccttgagtgt ctcgtcaatt gtgaatgact ggtgataagg aatgatctcg
     9421 caataaacgt tcgcttctct tacggcgcgt gcgatcaatt gtgtgtactg acttccaaaa
     9481 tcgaggacta gaatcttttc cgtcatagaa gagccgcgaa tataagctat tctatcatca
     9541 gctaccgggc tgaaaactca caccgtgtta attaaccagc gaaaaatcta tttcaccgcc
     9601 tgcgctgccg tccagtcgct ttttggattg aaataactcc ataataatgc tgacaacttt
     9661 cttgtcagca cccacgcctc attcgtaggc tcccatgttg tatctgaatt attcttggta
     9721 aaaattgaaa agatgtatgg attctctttg ctgtttacat agacaacttc gttgcggctt
     9781 tcatcgacgg cgccattctt atctgccaca aaaacgcccg gaggaatttg gctcagcgct
     9841 tcttcgtccc aatactgcct gctcaacaaa cgcagcattt tttcgctgga cgctttactc
     9901 agcatgttac cgttcactac actttccata atgaccgcga tctctcctgg tgttgtctgt
     9961 ccccacccat aaacttcacg tatctcttcg cgcccgggag ttcggctgtt cacgcgcgtg
    10021 tatttatacc cgaggctatc gaggatcgca ttgatccttg cgccgccacc cgcgagccct
    10081 tgcagccaaa ggcttgcaca gttgtcacta atcgtcagca tgagcatcat caccttactt
    10141 agttcaatcg aagagctgtc cttgaacctt gaaagaatat cgtcgccctc gtcataaaac
    10201 aacgaatctg tatacaaaag ccgctgatga taatccaact ctcctttttg gatcttatcc
    10261 atgatgccta ttagaatcgg gatctttaca atgctcgcgg ttggaaaaac ggtgtcggca
    10321 tttatttcaa ctatccggtt atgttttaaa tcacgcacat aaacaccaac gtccccatga
    10381 aatcctttca gaagttccgt tatctttttt tccagctttt catctgtctt ttgtgcatcg
    10441 gtgaaaacag ctagtaagca gcagatcgca gtcagatatt taaccatcga aaaatgattt
    10501 tcgatgaaga tactgatgtc tgttcatcct cgcactccgc gatgactgat atcagagtta
    10561 ttaacctgat cttccttatt tatcattcag gcaattcgtt tatacatttg ctcaggtgaa
    10621 aaagatcgct gttataccag ctcgttatgc ctccacgagg tttccagcga agctcatgca
    10681 gatgctcggt gataaaacca ttataagaac tacttatgaa aatacagtaa gcaccggctt
    10741 atttgatgaa gtactcgtag tgacagatag tgaactcatt ttaaacgaga tcaatcagtt
    10801 tggcggcaac gcagtaatga gcaaacgggc gcatgaaagc ggcaccg
//
LOCUS       DASQJI010000015         2160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1256, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000015 DASQJI010000000
VERSION     DASQJI010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(475..546)
                     /locus_tag="VEV83_00595"
     tRNA            complement(475..546)
                     /locus_tag="VEV83_00595"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(511..513),aa:Arg,seq:cct)
     gene            628..1074
                     /locus_tag="VEV83_00600"
     CDS             628..1074
                     /locus_tag="VEV83_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK43634.1"
                     /translation="MKKVCSTIFLFSLASIFSILKAQPQFNHITVYVVDLKKSADFYK
                     TALHLQEIPEPFHDNRHVWFKIGEHSQLHVVSGAKEVSAHDINIHLAFTVPSVENFSR
                     HLDSLSIKYGNWAQSTKEPQLRPDGIKQIYLQDPDGYWIEINDDKF"
     gene            1186..1839
                     /locus_tag="VEV83_00605"
     CDS             1186..1839
                     /locus_tag="VEV83_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43635.1"
                     /translation="MKLYNLLIKYRFWLSILAIVIGAVLNLTGTGFWPAFPLYFVGLI
                     GLLSHFFIGPLRLLQQPMEEGKFEEVEKILAGIWFPNLLYKPIRSTYYTVKGNLAMMK
                     QDFDTAEKHLKKSASLGAPMPEAEGANKLQLGMMSMQKGDFKAAEGYMRAAIRAGIPD
                     KESQAIAYLGMCQIFMNKREFRAAKDFFRKAKACKPTTKQVVDQIKEIERYISRAPG"
BASE COUNT          655 a          448 c          434 g          623 t
ORIGIN      
        1 tttagtgagc tatttaataa agtttcgaat gatctttaac gtatcttctt tttatcaatc
       61 gttcttctat ggcctgcttc attatatctc aactgaacaa ttcaattccc cgcaagtaat
      121 catcatacct ccatctaaag acagaatttt tcgttgttgc acttttgcat agcgggtagc
      181 aagtacgccc catcttgaaa gttcggcggg agtggtcata agcagttctt gaaaattaaa
      241 ttacagatat tttctaatta aaaatccaat ccggttaagt ataatttttt ataccggaaa
      301 taatcgtttt tcaactacag gactatagaa aaataactat gggcaaataa ggtttaaaaa
      361 aattgttctt taggaacgta aaagcgatac gtgcttaaaa tctacacagt ttaatcggtt
      421 aaaagtggcg gagaagaatg gactgtatct gaagttttag tcgcaatcga aaagtagccc
      481 cgacaagaat cgaacttgta tctaaagttt aggaaacttc tattctatcc attgaactac
      541 ggggccattg aatccgcaaa agtaacaatc aaggttatca acctgccgga aattgaaatg
      601 aattattttt aggcaaattt atttcagatg aaaaaggttt gctccacgat cttcctgttt
      661 tcgctggcct ctatattttc cattttaaag gcacagcctc aattcaatca cataacagtt
      721 tacgttgtcg atcttaaaaa gagcgcagat ttttataaaa ccgctctgca cctccaggaa
      781 attcctgagc catttcacga caatcgtcat gtttggttta agatcggaga gcatagccag
      841 cttcatgttg tttcaggcgc aaaggaagtt agtgcccacg atatcaatat ccatctcgct
      901 tttactgttc catctgtcga aaacttctca aggcatcttg attccctctc tataaaatat
      961 ggaaactggg cccaatccac taaagaacca caactgagac cagacggtat aaagcaaatc
     1021 tatttacagg accccgatgg ttactggatc gagatcaatg acgacaaatt ctaacttctt
     1081 tattagaata ttcagtatga cgatgttggc cgagtgcgca gaccggtgaa gatatctcaa
     1141 tatcacaaag gataaactat cttcgccgct ctcaaaaatg tgcgtatgaa gttgtataat
     1201 ctccttataa aataccggtt ctggttaagt atccttgcaa ttgttattgg cgctgtcctc
     1261 aatctcacag gtactggttt ttggcctgca ttcccactat attttgtagg cctgattggt
     1321 ttgctgagtc acttttttat tgggccctta cgactgctgc agcaaccgat ggaggaaggc
     1381 aagtttgaag aagtggaaaa gatccttgcg ggtatttggt ttccaaacct gttatacaaa
     1441 ccgatccgtt ctacgtacta taccgtaaag ggaaatcttg ccatgatgaa gcaagatttt
     1501 gacactgctg aaaaacatct gaaaaaaagc gcgtccctgg gcgccccgat gccggaggcg
     1561 gagggagcga acaaactgca attgggcatg atgtctatgc aaaagggcga ttttaaagca
     1621 gcagaaggat atatgcgcgc agctatccgt gccggtatcc ctgataaaga aagccaggcg
     1681 atcgcatatc tcggcatgtg ccagatcttt atgaataaaa gagagtttcg tgcggcaaaa
     1741 gattttttca ggaaagccaa agcctgcaaa cccacgacga agcaggtcgt tgaccagata
     1801 aaagagatag agcgatacat ttcccgcgcg cccggataga tcgcccaacc ctcgctgtaa
     1861 aagtgtccgc aactaacaga ggccgaagcc acatgcgatc acgtaatcgc aattgtttta
     1921 gtgcaggcta tcgtttctcc tctgaaaaac ggattcacag taagagtatt tgttccacat
     1981 ttgctgcaac gaatagggaa ggtttttttt aagctttggt ataagtttaa ttgaaggtat
     2041 tcgcttcagt catcacccaa ctcagcacga tccgctcaaa aattcttgag ctaatgccga
     2101 gctcaattga cgatctttta ttgaaaacaa ctggcagcaa aaaattatcg ttttgttttt
//
LOCUS       DASQJI010000016         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2919297,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000016 DASQJI010000000
VERSION     DASQJI010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919297"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..783
                     /locus_tag="VEV83_00610"
     CDS             178..783
                     /locus_tag="VEV83_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43636.1"
                     /translation="MKQRNFCFLFFILWMQSCVPTAHIENEWSAPDAKIDSTKMFQKI
                     LFVALLKDNPTRRIAEDKLVAEVRPRGVASYSYLGAVSTTPNEGLIADRLRQDGFDGV
                     VVMRLAEVDKNKNYVPGSYPSYYSSWYGYYSSSYPAFSDPKYYAPGGFYTIETNVYSL
                     VQNKLVWTGVTSAVNFTDTNKMMDNVISMIKQRMKSQGLIK"
     gene            complement(792..1292)
                     /locus_tag="VEV83_00615"
     CDS             complement(792..1292)
                     /locus_tag="VEV83_00615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43637.1"
                     /translation="MHRKMFMQQLSLASGSLLATPIISFAQRDQNPPLPIEMVKEFVI
                     AGHGNFDKTKELLQQQPALLYATYDWGNGDFETALEGAGHTGNKDIANFLIDKGGRTN
                     LFVLTMLGKTQIVKSFLETFPSYLIARGPHGLTLLHHAQKGGDDAKELLDYFQSMGLK
                     ETVMKL"
     gene            complement(1393..>1596)
                     /locus_tag="VEV83_00620"
     CDS             complement(1393..>1596)
                     /locus_tag="VEV83_00620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43638.1"
                     /translation="APGTAGEATVEPSHDCLNYCPVHNGSVVCELVAEDHCPMNGYWH
                     TNKSQHLSPDDSAVTHVSFSPMK"
BASE COUNT          441 a          343 c          370 g          442 t
ORIGIN      
        1 aaacgcaaat atgaaatagc cccaacaaat aaattgtttc aacaacgacg ttgatatgac
       61 gtgcgttatt ggtttattcc ggaaaacaaa atgaaaagcg gaactttatc aagcgccggt
      121 tggcgatgta ccaaccgata aaaaactagg cttaacttca cttaaacgaa gttgataatg
      181 aagcagcgaa atttttgttt cttatttttt attttgtgga tgcaatcatg cgtgcctacc
      241 gcacacattg aaaatgaatg gagcgctcct gacgcaaaga tcgacagtac gaaaatgttt
      301 cagaagatct tgtttgtagc cctgttgaag gacaatccca caaggagaat tgcggaagat
      361 aaactggtag ctgaagtaag gccccgcggc gtcgcatcat acagttacct cggcgcagtc
      421 agcaccacgc caaacgaagg tttgatcgcc gacaggttga ggcaagacgg atttgatggc
      481 gtagtcgtga tgcggcttgc ggaagttgac aagaataaaa attatgtacc cggcagctat
      541 ccttcttatt atagttcatg gtatggttat tatagttcct cgtacccggc gttcagtgat
      601 ccaaaatatt atgcacccgg tggcttttac acgattgaaa ccaatgtgta ttccctggta
      661 caaaataaac tcgtgtggac cggtgtgacg tcagcggtga acttcaccga cacaaacaaa
      721 atgatggata atgtgatctc aatgatcaag cagagaatga aaagccaggg gctgataaaa
      781 taaaacctcg tctacaattt cataactgtt tccttcaaac ccattgattg gaaataatcc
      841 agcagctctt tagcatcatc gcctcctttt tgtgcatggt gcaatagtgt tagtccatga
      901 gggcctcttg ctatcaaata cgatggaaat gtttccagga atgatttcac gatctgtgtt
      961 ttgccgagca tagtcaacac aaataaattg gtgcgcccgc ctttgtcgat gaggaaattg
     1021 gcgatgtctt tattgccggt atggcctgcg ccctcaagcg ccgtttcaaa gtcgccgttg
     1081 ccccaatcat acgttgcgta cagcaaagcg ggctgctgtt gaagcaattc ttttgtttta
     1141 tcgaaatttc catgccccgc gatcacaaac tctttaacca tttctattgg aagcggtgga
     1201 ttttgatctc tttgtgcgaa tgatattatg ggtgtggcaa gcaagctgcc tgaagcgagg
     1261 cttagctgct gcatgaacat tttgcgatgc attttttatt taaaggttgc tgattaaacc
     1321 gaatttcagc taccgtttat caattcgcga aggcggaggg attgtacttc gcgacaacag
     1381 ccggaacagt tgctacttca ttgggctaaa cgaaacatgg gttacggctg aatcatcagg
     1441 cgataaatgt tgagacttat ttgtgtgcca gtaaccattc atcgggcaat ggtcttctgc
     1501 gaccaactcg catactactg atccattgtg caccgggcaa taattcaggc aatcgtgtga
     1561 tggctctacc gttgcttcgc cggccgttcc gggtgc
//
LOCUS       DASQJI010000017         3901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_462015,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000017 DASQJI010000000
VERSION     DASQJI010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3901
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462015"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VEV83_00625"
     CDS             complement(<1..361)
                     /locus_tag="VEV83_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43639.1"
                     /translation="MKTKFYFAAIVHLIFLCGGLNAQTNIFPSTGAVGIGTTSPDPSS
                     LLEIVSTSKGLLIPRMNKTQRDAIATPSTSLLIYQTNSTPGFYYFDGSIWKPISAKGA
                     NQTLSNLTTTSVNAPLQP"
     gene            complement(413..2386)
                     /locus_tag="VEV83_00630"
     CDS             complement(413..2386)
                     /locus_tag="VEV83_00630"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK43640.1"
                     /translation="MKISYYTTLGLLFMLTRHSFSQTNVFPSTGSAGIGTTTPDASSI
                     VEMKSTTQGMLIPRMSKTQRDAIGSPATGLMIFQTNSTPGFYYYSGTAWTAVFSKGAN
                     TALSNLKSPTAVNVDILPDSAGKRNFGAGGFTWNNIYFHGKWYRDSIQLLSSNSVNLF
                     FGDNAGLINAGQYNTAFGLAAFSSNKAGQLNTAIGYQALSLDSTGFENTAVGSQALYL
                     HKTGGDNSAIGSGALLNSTTGYRNTALGAAALYFSTTGYENVAIGYKALGNSTGFRNT
                     ATGPVAMNANTSGYDNVATGDSALYSNHDGSNNAAVGNNALHENISGIYNTAAGFRAL
                     YKNDGFRNTALGNEALSSNTSGNFNTSVGDNAGSNVKTGSNNIFIGAGANCGTTGAIS
                     NSTVIGSNAVNTVSNSFVFGDANITGWGFGVGAGARAIKVGSSASNGNGAYLTVGGTW
                     TSTSARSKKEDFQKQDENLILQKINQLDVTKWKYKGTKDEYHYGPMADDFHRLFVVGD
                     DSSTSDMDKTGVLFLGMQQLIKLNDEKDAKINDLQKQIDELKAMIVSGGHAQTGMNDE
                     LSVMSGASLQQNIPNPFNHTTTINYLLPEKYSSAKMIVTDNTGKVLKEENIAANRKGS
                     LSVDGATLASGAYQYSLYVDGRLIDSKQMLLSR"
     gene            2742..>3901
                     /locus_tag="VEV83_00635"
     CDS             2742..>3901
                     /locus_tag="VEV83_00635"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK43641.1"
                     /translation="MPKFLSRFLPLLFLAVFRFSTLVNGQTLDSLRGNLQRASGTAEK
                     ASALAKFSFALASSHPDSAMLLAKQSLQLAQSLKIDSLIAASYNSIGWCYFRLGSKDS
                     AEYFLEKARSGYHELRNANEEGKCLVNLSSVHNEYHEYAKSLTSLITARTLLEKANNE
                     TMLAYIDRTVGVVYRQQGMYDKSAQYFRSAIATFKRLQNFSYLADTYTSYGSVFWQEN
                     NYDSALYYYRNAYTIYRTKTNNIIGKAYAAENIANAFYKKANEQNVHPWIDSAYFFYT
                     AALNAFIKIGGEENIKFEQTYLAETLRILGQYETAAKYLDDSFRYFDSAGDVTYAYNT
                     ADGLSRLYKDQGDYKKAYEYALLAGQYKDTLDDRNRADSIAKMFAEYETEKK"
BASE COUNT         1061 a          866 c          835 g         1139 t
ORIGIN      
        1 ctggctgcag cggagcattt acggaggttg ttgtgagatt agacaaagtt tgattggcgc
       61 ctttggctga tataggcttc catatcgatc cgtcgaaata ataaaagccc ggcgtgctgt
      121 tggtttgata gatcaataag ctggtcgatg gagttgcaat agcatcacgc tgggttttat
      181 tcatgcgcgg aattaaaagt cctttcgatg tggaaacaat ttcaagaagt gaagaaggat
      241 cgggcgaagt ggtaccaatc cccacagcac ccgtagacgg aaaaatgttc gtttgtgcat
      301 ttaatcctcc acacaaaaaa ataaggtgaa caatggcggc gaaataaaat ttggttttca
      361 tgattaacga ttttatggtt gcgaggtaaa aagaggatcg accaagtcac aattatctgc
      421 taaggagcat ttgcttcgaa tcaatcaatc tgccatcaac atacaatgaa tattgataag
      481 cgcctgatgc aagcgtagca ccgtcgacgg acaaacttcc tttacgattg gcggcaatgt
      541 tttcttcttt caaaactttg ccggtgttat ccgtaacaat catcttagcg gaagaatatt
      601 tttccggcaa taggtagttg atcgttgttg tatgattgaa aggattcgga atgttttgtt
      661 gcaacgacgc gccactcatc actgataact catcattcat tcctgtttgt gcatgaccac
      721 cggaaacgat catcgctttc aactcatcga tctgtttttg gaggtcgttg atcttcgcat
      781 ctttttcgtc attcagtttg atcagttgct gcattcccaa aaacaacaca cctgttttat
      841 ccatgtctga cgttgagctg tcatcaccga ctacaaacaa gcgatgaaaa tcgtctgcca
      901 tcgggccgta atgatattca tcctttgttc ccttgtactt ccattttgtc acgtcgagct
      961 gatttatttt ttgcagtatc aggttttcat cctgcttctg aaaatcttct ttcttactgc
     1021 gtgcagaagt actggtccat gttccgccta cagttaagta tgcgccgttc ccgtttgatg
     1081 cagacgatcc cacctttatt gctcttgccc ctgcgcctac accaaaaccc cagccggtta
     1141 tgttagcatc gccaaaaaca aaactgttgc tcactgtgtt gacggcgtta cttccaatca
     1201 ccgtcgaatt gcttattgcg ccggtagttc cgcagttagc gccggcgcca atgaaaatat
     1261 tattgcttcc tgtttttaca ttagagcctg cgttatcgcc tacagatgtg ttgaagttac
     1321 ctgaagtatt tgaagacagc gcttcatttc ccaatgccgt gtttctaaaa ccatcgtttt
     1381 tataaagcgc cctgaatcca gctgccgtat tgtagatccc ggaaatattt tcatgtagtg
     1441 cattattacc caccgctgca ttattactgc catcgtggtt tgaatataac gctgagtcgc
     1501 ctgtggcaac attatcgtaa cccgatgtat ttgcattcat cgctacagga ccggtagctg
     1561 tgtttcggaa gcctgtcgaa tttccgagcg ccttatagcc tatagcgaca ttttcgtatc
     1621 ctgtggtact gaagtaaagt gcagcggcgc ccaatgccgt attcctgtaa ccggttgtag
     1681 aatttaaaag tgcaccactg cctattgcac tattatcgcc tccagtcttg tgtaagtaca
     1741 gcgcctgcga accgactgcg gtattttcaa atccagtgct atccaggctc aacgcctggt
     1801 agccgatagc cgtgttaagc tggcctgctt tatttgaaga aaaagctgca aggccaaatg
     1861 cggtgttgta ctgccccgca ttgatgagtc ctgcattgtc cccaaagaac aagttcacag
     1921 aattgctgct caacaactgt attgagtcac ggtaccattt gccatgaaag taaatattgt
     1981 tccaggtaaa gccacctgcg ccaaaatttc ttttgcctgc actatccggt aaaatatcaa
     2041 cgttaactgc tgtgggcgat ttcaggtttg acaaagctgt gttggctccc tttgaaaaaa
     2101 cggccgtcca cgccgttcca ctgtaatagt aaaaccccgg cgtgctattc gtttgaaata
     2161 tcattaaacc tgttgcagga gaaccaatgg catcgcgctg cgttttgctc atacgcggaa
     2221 tgagcattcc ctgtgttgtt gatttcattt caacaataga ggatgcatcc ggtgtagtgg
     2281 taccaatacc cgcgctgcct gttgagggaa agacattcgt ttgggaaaag ctgtgccggg
     2341 tcaacataaa tagtaaccca agtgtcgtgt agtaactgat tttcattaaa aaagaaattt
     2401 tattgatggc gagacttgaa attacaggcg cttatttaac cgtgcccgat gatctataat
     2461 atttttcgtt acaaaatgcc tccatgctgt gtacaaccga atctgtctgt tgatcaagta
     2521 ctgtggtgta ttatttcttt cttggtcatc attttttaca cttacaaagc tatccggtca
     2581 aaatgatgtc gtcaatcccg aatatgagtg agaaacataa tagcgccgga caacagttgg
     2641 caacaaaatt gcatgtcttc gggtagttcc gccggattcc aatgtctaca tacgtattcg
     2701 cgataagacc tgcaatcttg caattctgca attcgtcttc tttgccaaaa tttttaagcc
     2761 gattcttacc gttattgttt ctcgcagttt ttcgtttttc tacgctggtt aatgggcaga
     2821 cactggattc attgaggggg aatttgcagc gcgcatccgg caccgccgaa aaagcatcag
     2881 cacttgcaaa attttctttt gcccttgctt cttctcatcc agattccgcg atgttacttg
     2941 caaagcaaag tttgcagctt gcgcaaagcc tgaagatcga cagtctgatt gcggctagtt
     3001 acaactcgat cgggtggtgt tattttcgtt taggcagcaa agattccgct gaatattttt
     3061 tagagaaagc gcgcagcggg tatcatgaat tacgaaacgc taatgaagaa ggcaaatgcc
     3121 tggtaaatct cagctccgtt cacaacgaat atcatgaata tgcaaagtca ctgactagtt
     3181 tgataactgc gcgaacgctt cttgaaaagg cgaacaatga aacgatgctg gcttacatcg
     3241 atagaacagt tggcgttgtt tatcgccagc agggaatgta tgataagtcg gctcagtatt
     3301 ttcgatccgc gatagcgacc tttaaacgac tacagaattt ttcttacctc gcggatacat
     3361 acacatccta cggctctgtg ttctggcaag aaaacaatta tgattcggcc ctttattatt
     3421 accgcaatgc ctatactatt tatcgcacta aaacaaacaa cataatagga aaagcgtatg
     3481 cagccgaaaa catagctaat gctttttaca aaaaagcgaa tgaacaaaat gtgcacccgt
     3541 ggatcgactc agcgtatttc ttttacacag cggccttaaa tgcatttata aaaataggtg
     3601 gtgaagaaaa cataaagttc gaacagacct atttagcgga aacactgcgt atcctgggtc
     3661 aatatgagac cgccgctaaa tatcttgatg attcttttcg ctattttgat tctgcaggag
     3721 atgtaacgta cgcttataac acagctgatg gattaagccg attgtataaa gaccagggcg
     3781 attacaaaaa agcctacgaa tacgccctcc ttgccgggca atacaaagac accttagacg
     3841 acaggaatcg ggctgattcg atagctaaga tgtttgcgga atatgaaacg gaaaaaaaag
     3901 a
//
LOCUS       DASQJI010000018        15445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1076254,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000018 DASQJI010000000
VERSION     DASQJI010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15445
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1076254"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..973)
                     /locus_tag="VEV83_00640"
     CDS             complement(98..973)
                     /locus_tag="VEV83_00640"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYK43642.1"
                     /translation="MSETNLTTLNRIIHFPVIKMLIGIAAVVGSVALIEWGGRSLLDE
                     TQFPDELKNLVIAVVESVVAVYVYFTLFKIYEQRPITELSRKLFFKHASRGFSMGFLL
                     QTLFIFILYLAGGYDVIAINPVSFLLPAFTSALSAGFVAEILIRGIAFRLTEESLGTL
                     ISVLIFAVLFAIFHLNASGATIFSVIATALLAGLLLSSAYVLTRSLWFPIFLHFAWDF
                     TEPGIYGAINPGNSVTESFIASVVGGPVSLSGGEMGPQNSVQSIITCLAASLFFLWIA
                     KRRNNFVRPFWSRHA"
     gene            complement(1178..1996)
                     /locus_tag="VEV83_00645"
     CDS             complement(1178..1996)
                     /locus_tag="VEV83_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GLPGLI family protein"
                     /protein_id="HYK43643.1"
                     /translation="MEFLKDRGGHTGKSTVVMMRNFLIFIVATVLMHGKLLSQDVFIS
                     SGKIEFEKRVNLYKNLDDQSSDNEGGFDWTSQLKKTLPEYQVTYFNLIFDNNKTLYKP
                     GREVVQSQKIPDWFEGPASANTVFNDLQNGKSTAQKTVYETMFLLQDTLRHTPWRISS
                     DTRVIAGFKCRKATAIIMDSVFVIAFYTDQIVTTGGPESFNGLPGMIMGLAVPRLHTT
                     WFATKVELTEPKPEELAPPLKGKKATNEELVQKLKSSMKDWGKWGQHAQWEILL"
     gene            complement(1948..4752)
                     /locus_tag="VEV83_00650"
     CDS             complement(1948..4752)
                     /locus_tag="VEV83_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK43644.1"
                     /translation="MRKILTLVFLVFLIEFAPAQVGNQPNQQASVKGTIVDTTNKKNL
                     LNTTIALLHAKDSVLYKFTRSKEGGSFELDHLDSGRYILMITHNAYADYLDTFTLHLN
                     ETKDLGNVMMTLEANLLADVTVRTKIAAMRMKGDTLSYAADSFHVRQGASVEDLLKVL
                     PGIQVDKSGNITAQGEKVQKVLVDGEEFFGDDPTVATQNLQADAVKEVQVFDKKSDQA
                     EFSGIDDGQKTKTINLKLKDDKKKGYFGKLDVGAGTDERWNNSGMINDFKGKKKISAY
                     GIMSSTGRTGLNWDEQNSYGESGGGLEFNDDFGGFMFFGNNDDEFANGSYYGQGVPKS
                     WATGLNFGNKFNDDKQNLNGSYRFNKITSDGSGSTFAQSILPDSLFYNTESARTFNSR
                     WRHSLSTLYEQQFDSSFSLKLTAKGYMGHLNTFSDYKSQSLDAAGAPVNQSLRNSNSE
                     GDNSSLTANLILRKKFKKIGRTFSLNLNEVYNGSTTDGFLYSLNSFYDKTVLTNQDTT
                     DQEKKKDSRVNMFNSKATWTEPVAKNVFAEFNASYRLSTSDAENLSYDRNLDGKYNLL
                     NDTFSSHYNFDVTTLTGGLAFKYNGKKITAGLGSDVSTTNFNQTDIFKDTVFERNYTN
                     FFPRANFVYKFNQTSRLFLSYNGRTEQPTITQISPLADNTNPLIIYIGNPGLNEQFIH
                     NFNFNANSFKVLSQRGFYMYGNMTVTENAIVTNQVTDTNGITYFRYVNTNGNYNSWMG
                     LNYFKKFAKLDADFNWGINFNASRYNNFVNGVKNKTDNYAPGVQFGFNKSKEKKYNVN
                     YWANFNYNISKSSINQEQQTKYWTQSHNVDVTIYLPWKLEVNNQLQADLRQKTETFIN
                     NNNVFLWNGYIGRKFLKNDKGLLKLYAYDILDQNKGYDRQVNTNVVTERNYETLTQYF
                     LLSFVWNFSKTAAGTPANQP"
     gene            4858..6891
                     /gene="glgB"
                     /locus_tag="VEV83_00655"
     CDS             4858..6891
                     /gene="glgB"
                     /locus_tag="VEV83_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HYK43645.1"
                     /translation="MGSDTNNKTRTSRADSVGSEEANDETHRKHHSKKYEDIHFVDST
                     KPVWNYSLFNEEEIRNFQNGTNYRLYELFGNKQIEVLDTKGTYFAVWAPNATEINVIG
                     NFNNWDKDSHKLFVRLDHSGIWEGFIPNVWSGESYKYHIHGFKGAQLDKGDPFCHLWE
                     KRPLTASITWGTFYEWTDAHWMKHRKKNNSHEAPFSVYEVHLASWMRPDKFDEESYNT
                     YAQIAENLVPYVKHMGFTHVEFMPVMEHPFDGSWGYQGTGYFAPTSRFGSPQDFAAMV
                     DAFHNAGIGVILDWVPSHFPYDSHGLFMFDGTHTYEYADMRKGYHPDWNSYIFNYKRG
                     EVKSFLISNARFWCERFHADGLRVDAVSSMLRLDYSRKEGQWEPNEHGGNGNLEAIAF
                     IKDLNETLYRDFPDVQTMAEEATDWPKISRPTFEGGLGFGMKWMMGWMHDTLDYFKME
                     PMLRHLLQNKFTFSIMYFYDENFMLPLSHDEVVHGKSPMLYKMPGDEWQKFASLRLLY
                     TYMYTHPGAKLLFMGNEFAATSEWNYKTELQWDLLQFPSHGGMKYCVQKLNELYRDEP
                     ALYEKQFEPGGFEWGDLTKGHDAVLSYIRKGNKHKDDVIVILNMTPVVRHDWEMYVHG
                     KGDWKEIFNSDSKEFWGTGDVYNPEIKSELVDKPTKAYKLTLHLPALAGIVLR"
     gene            6955..8613
                     /locus_tag="VEV83_00660"
     CDS             6955..8613
                     /locus_tag="VEV83_00660"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HYK43646.1"
                     /translation="MTTSFDRLGLNDVLLTAIKDLGFQTPTAIQEKAIPVLLSGTKDF
                     IGLAQTGTGKTAAFSLPLLQLIDVQEKYPQALIVCPTRELCIQIVNDIGLFKKHIRGM
                     HVVAVYGGTSISTQVKDIKKGVQVVAATPGRLIDLIERKAINLEKIKYVVLDEADEML
                     NMGFQDDIEFILQNTPRRESTWLFSATMPPEIRKVSRRYMNTPFEVTIGKANTGSSDI
                     DHQFYVTSAHHRYETLKRLIDFHPGIYGLIFTRTKVDAQQIAERLTREGYDIDALHGD
                     LTQQQRDKVMGQFRDKSLQLLIATDVAARGIDVQGITHVINYELPDDVEVYTHRSGRT
                     GRAGNTGISISILHSRELYRLKQIERMIQQPFHRLEIPTGKDVCRKQFFFFMEKLLQA
                     DISHGDYETYVPMLAEKFAGIPKEEVLKRVAALEFDRFLKYYENAEDLNVRDQRSDGR
                     VLAGRDGRDGRTKDRFRKHETTDDYTRLFVNLGTKDGFYKASFLQFILDMSDLRKEVL
                     GKIDMKEMNSWVEVEPKAAKQMIRSLDGKNYKGRRIRMNEANSR"
     gene            8619..9293
                     /locus_tag="VEV83_00665"
     CDS             8619..9293
                     /locus_tag="VEV83_00665"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYK43647.1"
                     /translation="MARIFAIGDIHGCGLTLEKLLQEIQITAEDEIYFLGDYIDRGPN
                     SKKVIDLILRLQKENYHVHNLRGNHEQLFIDSEKDFENFDNWMANGGTRTLQSFGIIR
                     FSELKEEYNSFFNGTEFYFETPGFLFVHAGFNFDDENIFEDTEAMLWIRNMKVDKNKT
                     AGKLIVHGHTPTRLQTVRKNISSARQTGAINIDTGCALKNLPGYGLLSALEVSSMQLF
                     SVENVD"
     gene            complement(9893..10678)
                     /locus_tag="VEV83_00670"
     CDS             complement(9893..10678)
                     /locus_tag="VEV83_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HYK43648.1"
                     /translation="MNTATWQIKLPQFEGPFDLLLFFIERDELDIYNIPITKITNDFL
                     DFIHKQEKLNVEQGSEFILFISTLMRIKAKMLLPRKELDAQGNEIDPRQELVDKILEY
                     KKYKEAAAHMVEMEAVRLLMMKRGNLQRELMQVGDEASEGTEIQTVTLFRLMKAFERV
                     MRRVQERQNKPVHTVIRYNYTMEGSREFMLKTVQQQSTVSFEKVFEVCENRIHAIFLF
                     LSLLELVQQRYMSILTGEGRNNFIIEWNEGREQEGAEIEVKNE"
     gene            complement(10924..11346)
                     /gene="mscL"
                     /locus_tag="VEV83_00675"
     CDS             complement(10924..11346)
                     /gene="mscL"
                     /locus_tag="VEV83_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HYK43649.1"
                     /translation="MGFVKEFKEFALKGNVMDLAVGVIIGAAFKTIVDSVVNDLIMPI
                     VGIFFKSDFSNLYIPLSSKIPPDLPLAEARKLGPVFAWGNFVSVVINFIILAFIIFLI
                     IKGMNRLKRKEQDVVPSPPGPSSTDQLLIDIRDELRKK"
     gene            complement(11409..12155)
                     /locus_tag="VEV83_00680"
     CDS             complement(11409..12155)
                     /locus_tag="VEV83_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HYK43650.1"
                     /translation="MDNTRLDKIDTRAPASFDKKKTKEKTERILKELNELQNLLYAES
                     RHAVLIIIQGVDASGKDGLIRNVFGHLNPQGVMVQSFKIPTAEELSHDFLWRIHKHTP
                     AKGVVQIFNRSHYEDVIVTRVHKMIHDDIAFKRMKAINDFEELLVKHNNTSILKFYLH
                     VSAKEQRERLDERIRDVSKQWKYNQQDFVEAALRKDYLAAYEDCFEHCNKIPWVIVPA
                     DQNWYKEFLVAQTLRNALKNLDLQYPGLKK"
     gene            12203..13081
                     /locus_tag="VEV83_00685"
     CDS             12203..13081
                     /locus_tag="VEV83_00685"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HYK43651.1"
                     /translation="MNARTYNWLLFVVLSLIWGSSFILMKIGLQHLTAYDVASIRILS
                     AGIVLLPFARTAWKQVPRNKVGTVIIAGLVGNFFPAFLYCIAEIKIDSSLAAILNALT
                     PLCTIVIGVIFFQLRTTTAKIIGVLIGFFGLVLLPFAQREQINFTNFGYSTLVLIATL
                     CYGLNGHIVNRYLRDISSLQIAALSFSSFIPICVLILAFNGFFKLDILHDGIPFSVLA
                     SVVLGIMGTAIATIWFYMLVKSAGTIFASLVTYGIPFTAIIWGFLYGESINLLEMLCL
                     ALILAGVYLSSKQKNK"
     gene            13229..14203
                     /locus_tag="VEV83_00690"
     CDS             13229..14203
                     /locus_tag="VEV83_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HYK43652.1"
                     /translation="MSKGPISQFIQHHYRHFNAAALVDAAKGYEEHLMDGGKMMITLA
                     GAMSTAELGVSLAEMIRQDKVHIISCTGANLEEDIMNLVAHSHYQRVPQWRDLTPQEE
                     YKLLEKGLNRVTDTCIPEEEAFRKIQKHIHKLWKDADERNERYFPHEYMYKLLLSEVM
                     KPGYEIDEKDSWMVAAAQKNLPIVVGGWEDSTMGNIFASYVIKNEIRASTMKSGIEYM
                     VWLSDYYKNNCSGKGIGFFQIGGGIAGDFPICVVPMMYQDLEMHEIPFWSYFCQISDS
                     TTSYGSYSGAFPNEKITWGKLDIHTPKFIIESDATIVAPLVFAWLLGW"
     gene            14215..14730
                     /locus_tag="VEV83_00695"
     CDS             14215..14730
                     /locus_tag="VEV83_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43653.1"
                     /translation="MNIEELFLEAEADIKRNAHVDALRKFETILYDEPNHAPTHNSLG
                     WLYKTQFDDYHKAEMHFRAAIKSDPSYPHPYFHYAVLFTDMERYDELKRHLSRCLNVP
                     TIEKSWVYYRYAIAEELNMQFDAAITFFEKAILVSLNDEKIKEYRNDIDRCRKKIELA
                     LSHKDWTGHKK"
     gene            14898..>15445
                     /locus_tag="VEV83_00700"
     CDS             14898..>15445
                     /locus_tag="VEV83_00700"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK43654.1"
                     /translation="MQYRRMPIEIEAPEGYGYENIECNLSESSFTDQKLSDLGISVDN
                     LVLFYGDHRGKTELRKLIAAEANFSRDDVLITPGAAAALFIVATSLLDKNDHVVVAKP
                     NYATNIETPRALGATVSYLNLRFENRYQLDLDELQNLITEQTKLVSLTYPHNPTGVMI
                     DEATLRKIFDIVESKNTWLLFD"
BASE COUNT         4377 a         3360 c         3404 g         4304 t
ORIGIN      
        1 cagaaagttt ttggtatgca tatattttag ttttcagaag caagcagggc gccacagtta
       61 agttgcatga aaaaaagaca tcgttttact tgcacaccta agcatgacgg ctccaaaatg
      121 gacggacgaa attgtttctt ctctttgcga tccataaaaa gaacagcgac gcagccaaac
      181 aagttatgat cgattgcacc gagttctgcg gccccatttc accgcctgac aatgatacgg
      241 ggccaccaac aacgctggca ataaaacttt cggtgacgga attgccgggg ttgatcgctc
      301 catatattcc gggttcggta aagtcccacg caaaatgcag aaatatcgga aaccacagcg
      361 accttgtaag aacataagct gatgaaagca gcaaccctgc cagcaaggcg gtggcaatga
      421 cagaaaatat tgtagcgccc gatgcattca aatgaaatat tgcaaacagc acggcaaaaa
      481 ttagcacgct tatcagtgtg ccgaggcttt cttccgttag ccgaaatgca atgccacgaa
      541 tcagaatttc ggctacaaag cctgcactaa gggctgaagt aaatgcaggt aataaaaatg
      601 aaacaggatt gatcgcaata acatcgtatc cgcctgcgag gtaaagaatg aaaataaaaa
      661 gtgtttgcaa aagaaagccc attgaaaatc cgcgggacgc gtgtttaaaa aataatttgc
      721 gactcaattc ggttatcggt ctttgttcgt atattttgaa cagcgtaaaa taaacataca
      781 cggcgacgac actttcgacc accgctatta caagattctt tagttcatcc ggaaattgtg
      841 tttcatcaag cagtgatctg ccgccccatt cgatcagtgc aactgacccc acgacagctg
      901 caatgccgat cagcattttg atgacgggaa aatgaatgat cctgttcagc gtcgttagat
      961 tggtctcaga catttatgtg tcgttatcat caaacaaatc taaattcttt tgtaattaca
     1021 cttacgatgg aggagggaaa tgcggcgcaa caattggccg cgaagaatgc gaaaacaatt
     1081 tttagcgcaa cgcttagttt agatttgaac acctgggaca aggttcgcat gggacctgat
     1141 tctgagaaat ggcttcatag aaagccggtc agccgaacta caacaatatc tcccactgcg
     1201 catgctgccc ccacttgccc caatctttca tgctactctt caacttctgt acaagctctt
     1261 cattggttgc ttttttacct tttagcggcg gggcgagttc ttccggcttt ggctctgtga
     1321 gctctacctt cgtggcaaac catgtggtgt gcaggcgcgg aactgcaagc cccattatca
     1381 ttccgggcag gccgttgaag gattcaggcc ctccggtcgt gacgatttgg tccgtgtaaa
     1441 atgcgatcac aaaaacagaa tccataataa tcgctgtcgc tttccggcat ttaaaccctg
     1501 caatgacacg tgtatcgctg cttatgcgcc atggtgtatg acgcaaggta tcctgcagaa
     1561 ggaacatagt ctcatacacc gttttttgag ccgtgctttt cccgttctgc aagtcgttaa
     1621 aaactgtatt cgcgctcgcc ggcccctcga accaatcggg gatcttttgt gattgaacca
     1681 cctcacgtcc gggtttataa agcgtcttat tgttgtcgaa tattaaatta aaataagtga
     1741 cctggtattc aggcagggtc tttttcaatt gagacgtcca gtcaaaaccg ccttcgttat
     1801 ctgatgattg atcatcgaga tttttataca ggttgactct tttttcaaat tctatctttc
     1861 ctgacgagat gaatacatcc tggctcaaca gtttgccgtg catgagcacc gtcgccacaa
     1921 taaatattaa gaagtttcgc atcataacta cggttgattt gccggtgtgc ccgccgcggt
     1981 ctttgagaaa ttccatacga agctcagcag aaaatattgt gtaagcgttt cataatttct
     2041 ctcggtaacg acgtttgtat ttacttgcct gtcgtaaccc ttgttctggt caaggatatc
     2101 gtaagcatat aactttaaaa gccccttgtc attcttcagg aactttcggc cgatataacc
     2161 attccacaaa aagacgttgt tgttatttat aaaagtctcc gttttctgac gaagatcagc
     2221 ctgcaactgg ttattgactt ccagtttcca tggtaaataa atagtgacgt cgacattgtg
     2281 agattgcgtc caatatttcg tttgttgctc ctggttgatc gaagatttgg aaatgttgta
     2341 gttaaaattg gcccagtaat taacgttgta cttcttctct tttgatttgt tgaaaccgaa
     2401 ctgcacgcct ggcgcatagt tgtccgtttt atttttcacg ccattgacaa agttgttgta
     2461 acgggatgca ttaaagttga ttccccagtt gaaatcagca tctaattttg cgaacttttt
     2521 aaaataattc aaacccatcc atgaattgta attgccgttg gtattcacat atctaaaata
     2581 ggtgatcccg tttgtgtcag taacctggtt ggtaacaatc gcattctcgg taacagtcat
     2641 atttccgtac atataaaatc cgcgctgact cagcactttg aaactgttgg cgttgaaatt
     2701 aaaattatga atgaactgct cgttgagccc aggattgccg atgtatatta tgagcggatt
     2761 tgtgttatcc gccaggggag aaatttgtgt aatggtaggt tgctccgtgc ggccattgta
     2821 cgacaggaac agcctggaag tctggttaaa tttataaacg aagttagcgc gcgggaaaaa
     2881 gtttgtgtag ttacgttcaa acaccgtgtc tttaaaaatg tccgtttgat taaaattcgt
     2941 tgttgaaaca tcactaccaa gaccagcagt gatcttctta ccattatatt taaatgccag
     3001 cccgccggtt agggtggtca cgtcgaaatt atagtgactg ctgaaagtgt cgttcagcag
     3061 gttgtacttg ccgtcgagat ttctgtcata tgataaattc tccgcgtcgc tcgtgcttaa
     3121 acggtaactg gcgttgaatt ctgcaaacac atttttcgcg acaggttcag tccacgttgc
     3181 tttactgttg aacatattca cacgcgaatc ttttttcttt tcctggtctg ttgtatcctg
     3241 gttggttaaa acggtcttgt cataaaacga attcagtgaa tataaaaatc catccgttgt
     3301 actaccgtta tatacttcat tcaggttgag agaaaatgtc cggccgatct ttttaaattt
     3361 ctttcgcagg ataagattgg ctgttaaact cgaattatca ccttccgaat tgctattgcg
     3421 caaactttga tttacaggcg cgcctgccgc gtcgagcgac tggcttttat aatcactgaa
     3481 agtgttcaag tgacccatat atcctttggc agtaagtttt aacgagaagc tgctgtcaaa
     3541 ctgttgttca taaagcgtac tgagcgaatg cctccagcgg ctgttgaaag ttcttgcaga
     3601 ttctgtgttg tagaacaagc tgtccggtag aatagattga gcaaaagtgc tgccgctgcc
     3661 atcagaagtt atcttattga atcgataact gccattgaga ttctgcttat cgtcgttaaa
     3721 cttatttccg aagttcaagc cggtcgccca acttttcgga acgccctggc cataatagct
     3781 gccatttgcg aattcatcgt cgttattgcc aaaaaacatg aagccgccaa aatcgtcatt
     3841 gaattccagt ccgccgccac tttcgccgta gctgttctgt tcgtcccagt tcaaacccgt
     3901 tctgccggta ctgctcatga tgccgtatgc ggatattttt ttcttgcctt tgaaatcgtt
     3961 tatcatacca gagttattcc atcgctcatc agtacccgct cccacgtcga gctttccgaa
     4021 ataacccttc ttcttgtcat cttttaattt taggttgatc gttttcgtct tttgcccgtc
     4081 atcgatgccg ctaaattcag cctggtcact ttttttatca aagacttgta cctcttttac
     4141 cgcatctgcc tgcaggttct gtgtggcaac tgtgggatca tcaccaaaaa attcttcgcc
     4201 gtcaacaagc accttttgaa ctttctcgcc ctgcgccgta atgttgccgc ttttatctac
     4261 ttgtattccc ggtagtactt ttagcaggtc ttctaccgaa gcgccctgcc gtacgtgaaa
     4321 actatctgct gcatatgaaa gcgtgtcgcc cttcatgcgc atcgccgcga tctttgtacg
     4381 aacggtcaca tccgccagca aattggcctc gagtgtcatc atcacattgc ctaaatcttt
     4441 cgtttcattt aagtggagtg taaacgtatc caggtaatcg gcatatgcat tgtgcgtgat
     4501 cattaaaata tatcgacccg agtccaggtg atccaactca aaagatccac cctccttact
     4561 gcgcgtaaac ttgtacaaaa cagagtcctt tgcatgcagc aaggcgatgg tagtgtttag
     4621 aagatttttt ttattggttg tatcgacaat agtacccttt accgacgcct gctggttagg
     4681 ctgattacca acttgggctg gagcaaactc aataagaaaa actaaaaaaa caagtgttag
     4741 aatttttctc atccgggatc aagtttggga agacaagatg gacaaataat ttcagaaaag
     4801 aagtttcagt atgctaattt tatattaaag gcttctcaaa tatctaaacg gctcactatg
     4861 ggatctgaca caaataacaa aacgcgaacg tcaagagcgg actcagttgg cagcgaagaa
     4921 gcaaacgatg aaacgcatcg caaacatcat tctaaaaaat acgaagacat tcacttcgta
     4981 gacagtacta aaccggtatg gaactactct ttatttaacg aagaagagat ccggaatttt
     5041 cagaatggaa caaactaccg gttatacgaa ctgttcggca acaaacaaat tgaggtgctc
     5101 gatacgaaag gaacttattt cgctgtgtgg gcccctaatg cgaccgaaat aaacgtgatt
     5161 ggcaatttca ataactggga taaagattcg cataaacttt tcgtaaggct tgaccacagt
     5221 ggtatttggg agggttttat tccgaatgtg tggagcggcg aaagttacaa atatcacatc
     5281 cacggattta aaggagcaca acttgataaa ggcgatccgt tttgtcattt gtgggaaaaa
     5341 cggccactta ctgcgtcgat cacctgggga actttttacg aatggaccga tgcgcactgg
     5401 atgaaacatc gcaagaaaaa caattcgcac gaggctcctt tttcggttta tgaagtacac
     5461 ctcgcaagct ggatgcgtcc tgataaattt gacgaagaga gttacaacac ctatgctcaa
     5521 atcgctgaga atttagtgcc atacgtgaag cacatgggat ttacgcatgt ggagttcatg
     5581 ccggtgatgg aacacccgtt tgatggaagt tggggttacc agggcaccgg ctacttcgct
     5641 cctacttcgc gctttggaag cccgcaggat tttgcggcca tggtggatgc ctttcacaat
     5701 gccggcattg gagtgatcct cgactgggtg ccttctcatt ttccatatga ctcgcatggt
     5761 ttattcatgt ttgatggtac ccacacctat gaatacgcag atatgcgaaa aggttatcat
     5821 cctgactgga attcttacat cttcaattac aaacgcgggg aagtaaaaag ttttttgatc
     5881 agcaatgcaa gattctggtg cgagcgcttc catgctgatg gattaagggt tgatgcagtt
     5941 agttccatgt tgcgtcttga ttacagccgc aaagaaggcc aatgggaacc aaatgagcac
     6001 ggcggcaacg gcaacctcga agcgatcgct tttattaagg atctcaatga gacgctgtat
     6061 cgcgattttc ctgatgtgca aacaatggcc gaagaagcca cagactggcc gaagatcagc
     6121 aggccaacat ttgaaggcgg tttaggtttt ggaatgaaat ggatgatggg atggatgcat
     6181 gacacgctcg actatttcaa aatggaacca atgcttcgtc atttgctgca aaataaattt
     6241 acgttcagca tcatgtattt ctacgatgag aatttcatgt tgccgctcag tcatgacgaa
     6301 gtagtgcacg gtaaaagtcc aatgctgtat aaaatgccgg gtgatgaatg gcagaagttt
     6361 gccagcctgc gtttattgta tacgtacatg tacacgcatc cgggcgccaa gctgttgttt
     6421 atgggaaatg aatttgccgc tacgagcgaa tggaattata aaaccgaatt gcaatgggac
     6481 ctgttgcaat ttccaagtca tggcggcatg aaatattgcg tgcaaaagtt gaatgaacta
     6541 taccgcgatg agcctgcgct gtatgaaaaa caatttgagc cgggtggttt tgaatggggc
     6601 gacctcacca aaggacacga cgcagttctt tcgtacatac ggaaaggaaa taaacacaag
     6661 gacgatgtga tcgtgatatt gaacatgacg cccgttgtgc gacacgattg ggaaatgtat
     6721 gtgcatggta agggcgattg gaaagagatc ttcaacagcg acagcaaaga attttggggt
     6781 accggtgatg tgtataatcc cgagatcaaa agtgaattgg ttgataagcc gacgaaagcc
     6841 tacaaattaa ccctgcactt gcctgcgttg gctggcattg tgcttaggtg ataacactgg
     6901 ccggcaagaa caagaacacg gtgaacatac tgtacctttg ccgaaatttt ttccgtgacg
     6961 acttcattcg atcgattagg gttaaacgat gtattattaa ctgcgataaa agacctgggc
     7021 ttccagactc ccactgcaat tcaagaaaaa gctatccctg ttttattaag cggaacgaaa
     7081 gatttcattg gtcttgcgca aacaggcacg ggcaagactg cggcattcag cctgccattg
     7141 ttgcaactca tcgacgtgca agaaaaatat ccgcaggcat tgatcgtttg cccaacgcgc
     7201 gaattgtgca tacagatcgt gaacgacata gggttattta agaaacatat ccgcgggatg
     7261 catgtcgtgg ccgtctatgg cggcacaagc atcagcacgc aggtaaagga catcaagaaa
     7321 ggagtgcaag tggttgctgc tacgccagga cgtttgatcg acctgataga acgcaaagcg
     7381 atcaaccttg aaaagataaa gtacgtcgtg cttgacgaag cggatgaaat gcttaacatg
     7441 ggcttccagg atgacattga atttatttta caaaacacac cgcgtcgcga atcaacgtgg
     7501 ttgttcagcg caacaatgcc gcctgagatc aggaaggtga gcaggcgtta tatgaatacc
     7561 cccttcgaag taacgatcgg caaagcaaat accggaagca gcgatataga ccaccagttc
     7621 tacgtaacgt ctgcacatca ccgttatgaa acgttgaagc gcctgatcga ttttcacccc
     7681 ggcatttatg gattgatatt cacgcgtacg aaggttgacg cccaacaaat cgcggaaagg
     7741 ctcacccgtg aaggatatga catcgatgcg ctgcatggcg atctcacgca acaacagcga
     7801 gataaagtaa tgggacagtt tcgcgacaag agtctacagt tattgatcgc gacggatgtt
     7861 gctgcaagag ggatcgatgt acagggtatc acgcatgtca tcaattatga attgccggat
     7921 gatgttgaag tgtatacgca ccgaagtggc aggaccggtc gcgcaggcaa tacgggcata
     7981 agtataagca tcctccattc acgtgaatta tacaggttaa agcagatcga gagaatgatc
     8041 cagcaaccat ttcaccgact cgagatccca accggaaaag atgtctgcag aaaacaattt
     8101 ttctttttca tggagaaact gttgcaggca gatataagtc atggcgatta tgaaacgtat
     8161 gtcccaatgc tcgcggaaaa attcgccggc atcccaaaag aagaagtttt gaaaagagtt
     8221 gcggctcttg agtttgacag gttccttaaa tattatgaaa atgctgagga cctgaatgtg
     8281 cgcgaccaaa ggtccgatgg acgagtgctg gcaggccgcg acggaagaga tgggagaacg
     8341 aaagatcgtt tccgtaagca tgaaacgacc gacgattaca cgcggctttt tgtaaacctc
     8401 ggaacaaagg acggattcta caaagcaagt tttttacaat tcattcttga tatgagtgac
     8461 ctgagaaaag aggtactcgg aaaaattgat atgaaagaaa tgaatagctg ggtcgaggtt
     8521 gaacccaagg cggcgaagca aatgataaga tcgctcgacg gcaaaaatta taaaggcaga
     8581 agaataagaa tgaatgaggc taacagcagg tagaaaacat ggcaaggatt ttcgcaattg
     8641 gtgatataca cggatgcggg ttgacgttag aaaaattgtt gcaggaaatt caaataacgg
     8701 cggaggacga gatctatttc ctcggcgatt atattgaccg tggccccaac agcaaaaaag
     8761 tgatcgatct tattttacga ttacaaaaag aaaactacca cgtgcacaac ttacgcggta
     8821 atcacgagca actctttatc gattcagaaa aagattttga aaactttgat aactggatgg
     8881 caaatggtgg cacgcgcacg ctccagagtt ttgggatcat acggttcagc gagttgaaag
     8941 aagaatacaa ttcatttttc aatggcactg aattttattt tgaaacaccc ggttttcttt
     9001 ttgtgcatgc cggttttaat tttgacgacg aaaacatatt tgaagacacg gaagcgatgc
     9061 tatggatacg caatatgaaa gtggacaaaa ataaaactgc cggcaagttg atcgtgcatg
     9121 gccacacgcc cacccggctg caaacggtaa gaaaaaatat ttcttcggcc aggcagaccg
     9181 gcgcaataaa tattgatacg ggctgcgcct tgaagaactt accaggttac ggattgctgt
     9241 cggcacttga agtgtcgagt atgcaattat tttcagttga gaatgttgat tgatatgatg
     9301 aatcccgcag tcctcattgc gcttatgtcg ccggtcgggg tgttttttcc aaacaaccac
     9361 cacctcgatc aacttcagac ggtgcgattt ttttcgaagt gccagctgat tttttctaag
     9421 tgtgtcttcg tgccttcagg acttcgcggt tcaaaggttc agaaactacg gagaccagga
     9481 cagaaagttt cacaaagcat aatgaaacat cgcattacat gcttcttaat tttaatggca
     9541 cgacgcgtta atttctaatt actgatattt gaaaacggat ttattaccgg aagaaaaata
     9601 tttagaaaat aatcaacagc tacatcgaat caactaatag tcaataatcg tatgagtatt
     9661 caatcagccg gaaaattttt actcgtgtcc ttaattagcc tcgcggtctt tagcctcatt
     9721 tatttttttt atccgaaccg caatatgcag ctggccgttt taaacctgct gtacctcgcc
     9781 ttgttgctga cgataatctc cgtgataact tatattatcg tgcgcataaa acgaagacat
     9841 gactattgag gacggtgaca gtaatgagta atgagtcctg atagtcgagc cattattcat
     9901 tctttacctc tatctccgcg ccttcctgtt cccggccctc gttccattct atgatgaaat
     9961 tgttgcggcc ttcacctgtg agtatgctca tatatctctg ttgcaccaat tcgagcaaag
    10021 aaagaaataa gaatatcgca tgaatgcgat tctcgcagac ctcaaatact ttttcgaatg
    10081 aaactgtact ttgttgctgc accgttttca gcatgaactc ccggctgcct tccatggtgt
    10141 aattataccg gataaccgtg tgaacgggtt tgttttggcg ctcctgcacc cggcgcatta
    10201 cccgttcaaa tgccttcatc aatcggaata gcgtcaccgt ttgtatttcg gtgccctccg
    10261 acgcttcatc gcccacctgc atcaactccc gctgcaggtt gccacgcttc atcataagca
    10321 ggcgcacggc ttccatttcc accatatgtg ccgcagcttc tttgtacttt ttatactcga
    10381 gaattttgtc aaccagttcc tgccgcggat caatttcatt gccctgcgca tccaattctt
    10441 tccttggcaa tagcattttg gccttgatcc gcatgagcgt ggaaataaac aaaatgaatt
    10501 cactaccctg ctcaacgttc agcttttcct gtttatgaat aaaatcgaga aaatcgttcg
    10561 tgatcttagt gatcggaata ttatagatat ccagttcgtc ccgctcaatg aagaacagga
    10621 ggaggtcgaa agggccctcg aattgtggaa gttttatttg ccaggttgcg gtattcacaa
    10681 agtcgtttta agaagataac tgcgccaatg ccgcaatgta gcaagagaaa tgaacaacgc
    10741 gaaagcgagt tttacacaac cgaatgcgtt gcaggtatct tttgacgatc cacatacaat
    10801 ccgatccaac gatgggcatt cttcacaaag tcggcggtgc ttcgtcatgc gaaagttagc
    10861 gggcatcggc aaagcgttcc ctctgctatc ccgaggttag gagggatctg caacccagca
    10921 gtctcatttc tttctcaact catcccttat gtcgataagc aactggtcag tgctcgacgg
    10981 gcctggagga gatggcacca catcttgttc tttgcgtttc aagcgattca tgcctttgat
    11041 gattagaaaa atgataaacg ccaggatgat aaaattaata acgacagaaa caaaatttcc
    11101 ccaggcaaaa acgggcccta gctttctcgc ctcagccaac ggaagatcgg gagggatctt
    11161 tgaagacaag ggaatatata agttactaaa atctgattta aagaaaatcc ccacaatcgg
    11221 catgatgaga tcatttacaa ccgaatcaac aatcgtttta aaggctgcgc caatgataac
    11281 accgacagca agatccatta cattgccctt cagagcaaat tctttgaatt cttttacaaa
    11341 gcccataaac tagtttttgt ggttaattga tgtgtgaata taatattttc ggaaacgcgg
    11401 ctttggcttt atttttttaa cccggggtat tgcagatcca ggttttttag tgcattccgc
    11461 aatgtttgtg caacaagaaa ttctttgtac caattttgat ccgccggcac gatcacccac
    11521 gggatcttat tgcaatgctc aaagcagtct tcatatgcgg ccaaatagtc ctttctcaga
    11581 gcagcttcta caaaatcctg ttgattgtat ttccactgtt tgctcacatc cctgatcctt
    11641 tcatccagcc tttcgcgttg ttctttcgcc gacacgtgaa gataaaactt cagaattgac
    11701 gtattgttgt gcttaacgag caattcttca aaatcattga tcgctttcat tcgtttgaac
    11761 gcaatatcgt catggatcat tttatgcaca cgtgtcacga tcacgtcttc ataatgcgac
    11821 cggttgaata tttgcacgac tcccttagcg ggcgtgtgct tatgaattcg ccacaaaaaa
    11881 tcatggctca attcttcagc agtgggaatt ttaaacgact gcaccatcac tccctgtgga
    11941 ttcaggtggc caaaaacatt tcgtatcaat ccatcctttc cacttgcatc aaccccctgt
    12001 ataataatga gcaccgcatg cctggattcc gcatacaaaa gattttgcag ttcattgagc
    12061 tctttgagaa tacgctccgt tttttctttt gtttttttct tgtcgaaaga tgcgggcgcc
    12121 cgcgtatcaa ttttatcaag ccgggtgtta tccatatagt gtttttcttg aatgaatgta
    12181 tgacatttgc gcaaaatttt gattgaacgc aagaacctat aactggctgt tgtttgtcgt
    12241 gctctctctc atatggggca gttcttttat ccttatgaag attgggttgc aacatctcac
    12301 cgcttacgat gttgcatcga taaggatact aagcgccgga atagtcttac tgccgtttgc
    12361 gcgcacggcg tggaagcaag tgccccgcaa caaagttggc accgtgatca tcgcgggttt
    12421 ggtcggtaat ttcttcccgg cgtttcttta ttgcattgcc gaaataaaga tcgacagttc
    12481 actggccgcg attttaaatg cgcttacgcc gctgtgcaca atcgttatag gcgtaatatt
    12541 ttttcagcta agaaccacaa ccgcgaagat aatcggtgtc ttgattggct tttttggatt
    12601 ggtactgctt ccctttgcac aacgggaaca gatcaatttc acaaacttcg gctactccac
    12661 attagtactg atcgcgacct tgtgttacgg actgaatggc catattgtca atcgctacct
    12721 gcgagacata tcatcgttgc aaatagcggc actttccttt tcctcgttta ttccgatttg
    12781 tgttttgata cttgcattca acggtttttt caaacttgac attttgcacg atggcattcc
    12841 gttttctgta ctcgcttctg tagtgttggg catcatgggc actgctattg caactatttg
    12901 gttttatatg ctcgtaaaaa gtgccggcac tattttcgct tcactcgtca cctacggcat
    12961 tccttttaca gcaattattt ggggatttct atatggcgaa tcaataaacc tgcttgagat
    13021 gctctgcctt gcattgatct tagcaggagt ttacctttca agtaaacaaa aaaataaata
    13081 aacctcttca gtgcagacgc caacattaac ttttgcggtc tcatccacat cccaatctcg
    13141 aataatccaa tagcccaaat agcctaataa accaattaac tccctgcctt atcacccttg
    13201 aaacttattt ttactttaaa tttagcgaat gagcaaaggt ccgatatcac aatttataca
    13261 acatcattac cggcacttta atgctgcagc gctggtggat gcggcgaaag gatacgaaga
    13321 acatttaatg gatggcggca aaatgatgat cacgcttgca ggggcaatga gcacagcaga
    13381 acttggcgtt tcactggcag agatgatacg acaggataag gtgcatatta tttcatgcac
    13441 cggtgcaaac ctcgaagaag atattatgaa ccttgtcgcg cacagccact atcagcgcgt
    13501 gccgcaatgg cgcgacctta caccacagga ggaatataag ttgcttgaaa aaggcttgaa
    13561 tcgtgtaaca gacacctgca ttcccgaaga agaagcgttc aggaaaattc aaaaacatat
    13621 tcataaacta tggaaagatg ctgatgaaag aaatgagcga tattttccgc atgaatacat
    13681 gtacaagctc ttgttaagtg aagtgatgaa acctggttat gagatcgatg aaaaagacag
    13741 ttggatggtt gcagcggctc aaaaaaatct cccaattgtc gtcgggggat gggaagatag
    13801 cacaatgggc aacatttttg caagctatgt gataaaaaat gagatcaggg caagcaccat
    13861 gaagagcgga attgaataca tggtgtggct ctctgattac tataagaata attgcagcgg
    13921 caaaggaatt ggatttttcc agataggcgg gggaatcgcc ggcgactttc cgatctgcgt
    13981 tgtgccgatg atgtaccagg atttggagat gcacgaaatt ccgttctgga gttatttctg
    14041 tcaaattagt gattcaacta cgtcatacgg atcatactct ggtgcatttc cgaatgagaa
    14101 aataacatgg ggaaagctgg acattcacac gcctaaattc atcatagaaa gcgacgcaac
    14161 catcgttgct ccactggtat ttgcgtggtt gctgggctgg taaaaataaa cgctatgaat
    14221 atagaagaat tatttttaga agccgaggcg gatattaaaa ggaatgcgca tgtagatgct
    14281 ttgcgaaaat ttgaaacgat tttgtatgac gaacccaatc acgcgccaac acataactca
    14341 ctgggttggt tatacaaaac gcaatttgac gattatcaca aggcagaaat gcactttagg
    14401 gctgccataa aaagcgatcc ctcttacccg catccatatt ttcattacgc cgtactgttc
    14461 accgacatgg agcggtatga tgaattgaaa agacatttat cccgttgctt gaacgttccc
    14521 acgatagaaa aatcctgggt ttattaccgt tacgccattg ccgaagaatt gaatatgcag
    14581 tttgatgctg cgatcacttt ttttgaaaag gcgatccttg tttcgctcaa cgacgaaaaa
    14641 ataaaagaat accgaaacga catagaccgt tgcagaaaaa agatagagct tgccttgagc
    14701 cacaaagact ggacgggaca caaaaagtga ctttatctga ttccttactt atcattgaac
    14761 ttccgcggta tggcgattta attttcccag cgtttccttt ctcgtatgca ttccatcagg
    14821 ctctttagtg actgccttca actttatcga aaagagagcg gtcaattgtt atgcactaac
    14881 ttttaaaata aaatcgtatg caatacaggc gaatgcccat agagatcgaa gcaccggaag
    14941 gatacgggta tgagaatatc gaatgtaact tatcggaaag ttcatttact gatcagaaat
    15001 taagcgacct cggcatctca gtagataacc tggtgttgtt ctatggtgat catagaggca
    15061 aaaccgagtt gcggaaactg attgctgcag aagccaattt cagtcgtgat gatgttttga
    15121 taacgccggg tgctgcagcc gctcttttca ttgttgcaac gtcattatta gataaaaacg
    15181 accatgttgt agtcgccaaa ccgaattacg ctacgaatat tgaaacgccg cgtgcgctcg
    15241 gcgcaactgt cagctacctg aatctgcgtt tcgagaatcg ctatcaactg gatcttgacg
    15301 aattacaaaa ccttatcact gaacaaacga aacttgtcag cctcacctat ccgcacaatc
    15361 ccactggcgt aatgatcgat gaagcgacat tgagaaaaat ttttgatatt gttgaaagca
    15421 aaaacacatg gctgcttttt gatga
//
LOCUS       DASQJI010000019         5261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1230139,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000019 DASQJI010000000
VERSION     DASQJI010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5261
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1230139"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VEV83_00705"
     CDS             complement(<1..747)
                     /locus_tag="VEV83_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43655.1"
                     /translation="MTVTVAEINFEREKNTKALGYTAGLLGALFLFFIFMSWTLPVPP
                     PPVVDTGVEVNLGNSDQGLGDIPPQIPGEPSQEQQTNFNPPPTVQAQAETQPEVAEND
                     EADATPIVTSPKPQVKKQVAVENNDNKKVSTQTVVNPTPAPPKPKAVYAGGTSAGSGG
                     NNADTYNNSRNQGIAGGHGDQGKPNGNPNSDSYTGNGGTGTAGISITNGLQGRRISSS
                     AHFQDAYKYGGKVSVDVTVDENGSVTSARVK"
     gene            939..2366
                     /locus_tag="VEV83_00710"
     CDS             939..2366
                     /locus_tag="VEV83_00710"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family peptidase"
                     /protein_id="HYK43656.1"
                     /translation="MKKLFFAAGILTLLSCNQATKQSGSDKKDVLSKASRENKNGWIY
                     VHLEGSPSDIGYQHGYLLADDIDTSIQAVAYYLQHDTHREWSFYHDAAKNFLWDKLDR
                     EYKDEINGIVAGLHDKNKTYDSLDLTAYNALEELAFYYVPQQDNLAKPGSGNNKAPGN
                     CSAFIATGSFTKDGKIVMGHNNWTEYLIGQHWNVIADIVPANGHHMMMDCMPGFIHSG
                     DDFVINDNGILITETTITQFLGFDSSGTPEFMRARKAAQYGNSIDDVINIFLKGNNGG
                     YANDWLIGDTKTNEVAKFELGLKDYRVWRSKDTAIIGSNFASDPKLIKEETTFDAADN
                     TTSPNARKLRMEQLVCVDMKGKLDEATGKQIEADHVDATQGKTVANRCVICGHIDADA
                     KGCKEWDLAPYYPMGAVQSKVTTADLAKNMQFWAHMGHPCGESFIGADFYKQHPEYAW
                     QAKYLNNMLSYPWTLFSAKAGGGPK"
     gene            2546..2827
                     /locus_tag="VEV83_00715"
     CDS             2546..2827
                     /locus_tag="VEV83_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43657.1"
                     /translation="MRDLKPFQKIVLVHAAIAALIALYYTMAEGGQGFADFALGFGLV
                     CLLSGIADVAISLILFIVSSRIWGKGFLLSAGILLLLSGISCGLAAGFY"
     gene            2832..3119
                     /locus_tag="VEV83_00720"
     CDS             2832..3119
                     /locus_tag="VEV83_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43658.1"
                     /translation="MTYDEFILSIENDAEPHNVSIYLDALWWDAKGDWTRAHTAVNDL
                     EDGKGCWVHAYLHRKEGDISNADYWYRRAGRNRPSVSLQDEWTSIVMELLT"
     gene            3194..3775
                     /locus_tag="VEV83_00725"
     CDS             3194..3775
                     /locus_tag="VEV83_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK43659.1"
                     /translation="MDDLLNIMQGCMVNDAKCQKIFYDRYLPYALRVSYRYVHSFDNA
                     AHAANDAFVKIFKNFTKFEIRDYEHVEPMLMGWMRRIVINASIDYMGRENLVASNGNG
                     YLPEAAWEKKGIGNSGENQLLYKELIALVRKLSPAYRVVFNLHVIDGYSHQEIADMLG
                     ISVGTSKSNLSKARAFLQKYLIKDDNGNVLCFT"
     gene            3763..5070
                     /locus_tag="VEV83_00730"
     CDS             3763..5070
                     /locus_tag="VEV83_00730"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK43660.1"
                     /translation="MFYVKEDDMDDLLRRAAENYSVDADKAHDWEAIRAAIEETAPAR
                     AVVQPKRKRRFIFWWLLLIPAGWFASTEWNKFQASHKTAQQVQQPANITREKSSVPHG
                     NSNDDNAGSATDVSGNSNETKTEQKLSDENAYTVAGNRSDGHRLKTGIVPATPKPFQA
                     TADQKQQNGTNISSSKDQPVQNDNDAAKVVNDKEASVNNSVTPQQNVVPAGNASSNDS
                     KKETTAGQAMTSTFAKKKSTSASNYFYAGLILGPDISFVKFQQAREVGINAGVIAGYK
                     FKKLSIETGLIYAEKNYYTSGEYFDKSKIPYFNNAQITSVDGYCHMFEIPLNLRYNFG
                     EKKNHAWFASAGFSSYLMHKEYYNFNYIRNDSTHEGAYPYYNASKNWFSILNLSAGYE
                     LKTGNKTSLRIEPYYKLPINGVGMGSISLSSVGINAGITRRIP"
     gene            complement(5067..5234)
                     /locus_tag="VEV83_00735"
     CDS             complement(5067..5234)
                     /locus_tag="VEV83_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43661.1"
                     /translation="MANHNAPNDPRRFTLIAFIAFVVVFVFVMIMMLWHGSYSINDDR
                     KINYNTQVNEP"
BASE COUNT         1483 a         1153 c         1275 g         1350 t
ORIGIN      
        1 cttgacgcgg gcactggtca cacttccgtt ctcatcaact gtaacatcaa cggaaacttt
       61 tcccccgtac ttgtatgcat cctggaaatg cgcagagctt gaaatacgcc ggccctgcaa
      121 tccatttgtg atgctgatcc ctgcggtccc agttccaccg ttgccggtat aactgtcgct
      181 attgggattt ccattcggtt ttccctggtc gccgtgccct ccggcgatgc cctggttgcg
      241 cgaattgtta taagtgtctg cgttgttccc accactgcct gcgctggtcc cgcccgcata
      301 gactgctttc ggttttggcg gcgccggcgt gggatttact actgtttgtg tgcttacttt
      361 cttattatcg ttgttttcga cggccacctg ttttttcacc tgtggttttg gtgatgtaac
      421 gatcggagtc gcatctgctt cgtcattttc cgcaacctca ggctgggttt ctgcctgcgc
      481 ctgaacggtc ggtgggggat tgaagtttgt ttgctgctcc tgcgacggct cgccggggat
      541 ctgtggggga atatctccca ggccctggtc gctgtttcca aggttcacct ctacgcccgt
      601 atccactaca ggcggaggag gaaccggaag ggtccaactc atgaaaataa aaaagagaaa
      661 caacgcaccc aaaagcccag ccgtataacc gagcgctttg gtgttctttt ctctttcaaa
      721 atttatttca gcaacagtga ctgtcatata acaaaattat cgtgaagcct taagagcgcc
      781 tgttataaag atgctaacat gtgtgaattc gccgccagga ttttcgggaa gagcttgttt
      841 gcatcttact ttcaaagccc tgttttctct ccgtccaatg ctcccctaag ccaatttgac
      901 ttctctaaaa gattatattt ggttttataa actgttttat gaaaaaatta ttttttgccg
      961 caggcatttt aaccttgctt tcgtgtaacc aggcgactaa gcagagcggc agcgataaga
     1021 aagatgttct ttccaaagct tcccgggaaa ataagaatgg ctggatctat gtgcatctcg
     1081 aggggtcacc atcagacatt ggttaccagc acgggtattt gctggcagat gatattgata
     1141 cttctatcca ggccgttgcc tattaccttc agcatgacac gcatagagag tggtctttct
     1201 accacgatgc agcaaagaat tttttgtggg ataagcttga ccgtgaatac aaagatgaga
     1261 tcaatgggat tgttgccggg ctgcacgaca aaaacaaaac gtatgacagc cttgacctca
     1321 cagcctacaa tgccttagag gaacttgcat tttattacgt ccctcaacaa gataacctgg
     1381 caaaaccggg cagcggtaac aataaagcgc cgggcaattg cagtgcgttt attgcaacag
     1441 gcagttttac aaaagacggc aagatcgtaa tgggccataa taactggacc gagtacctca
     1501 tcgggcagca ctggaatgtg atcgcagata ttgtgccggc gaatgggcat cacatgatga
     1561 tggattgcat gcccggattt attcatagtg gtgacgattt tgtaataaat gataacggca
     1621 ttttaataac cgaaaccacc atcacccaat tccttggttt tgattcttcg ggcacgcctg
     1681 agttcatgcg cgcaagaaag gcggcgcaat atggcaacag catcgacgat gtgataaaca
     1741 tttttctaaa ggggaataat ggcggctacg ccaacgactg gctcattggg gatacgaaga
     1801 caaatgaagt cgcaaaattt gaactcggtt taaaagatta ccgggtttgg agaagtaaag
     1861 acactgctat catcggttct aatttcgcca gtgatccaaa attgatcaaa gaagaaacaa
     1921 cgtttgatgc agccgacaac acgacatcgc caaatgcaag aaaattgcga atggagcaac
     1981 tggtttgcgt tgatatgaaa ggtaaactgg atgaggcaac gggcaagcag atcgaagcag
     2041 atcatgttga tgccacccag ggtaagaccg tagctaatcg ctgtgtgatc tgcggccata
     2101 tcgacgcaga tgcgaaaggc tgtaaagagt gggaccttgc tccttactac ccgatgggcg
     2161 ccgtacagag taaggtgaca acggcggacc tcgctaagaa catgcaattt tgggctcaca
     2221 tgggccatcc gtgcggcgag agtttcatcg gcgcagactt ttataagcag cacccggaat
     2281 atgcgtggca ggcaaagtat ttaaacaata tgttgtctta tccgtggacg ctgtttagtg
     2341 caaaggccgg aggcggtccg aaatgaggaa tgagccacga gctgcgagca atgagccccg
     2401 agcaaatgag caattgggaa tgagagatca aagatcagag atcagagatc agagatcaga
     2461 gatcagagtc agaggtgagc aagttacttt atcgcccgga tttacgagta ctctttcatc
     2521 attcacacct cagatcaaat gacacatgag ggatttgaag ccgtttcaaa agatcgtatt
     2581 ggtgcacgct gctattgctg cgttaatcgc gttgtattat accatggccg agggtggtca
     2641 aggatttgct gattttgctc ttggcttcgg cttagtttgt ttgctgagtg gtattgcaga
     2701 tgttgcgata agtctaattt tgtttattgt ttcctcaagg atatggggaa aaggcttttt
     2761 actcagcgcc ggcattttgt tattattaag cggcatctca tgtggacttg ccgccggctt
     2821 ttattgactt tatgacttac gacgaattca tcttaagtat tgaaaacgac gccgagccgc
     2881 ataacgtgag catttacctg gatgcattat ggtgggacgc gaaaggcgac tggacgaggg
     2941 cacacactgc ggtaaatgat ttggaagatg gcaaaggatg ttgggttcac gcatacctgc
     3001 accgtaagga aggcgatatt tcaaacgccg actattggta ccggcgcgcc ggccgaaaca
     3061 ggccgtcagt gtctctacag gacgaatgga cgtcgatagt aatggaattg cttacctgaa
     3121 tttcgactgg aaagcaaccc ttttagcgct gcaacagttt atttaataca attaaatcag
     3181 cacagccggc aaattggacg atctcctaaa tatcatgcag ggttgtatgg taaatgatgc
     3241 gaagtgtcag aagatattct atgaccgcta tttgccgtat gcactgcgtg tttcgtaccg
     3301 gtacgtacat tcattcgata atgccgcgca cgcagcgaat gacgcgtttg tgaagatctt
     3361 taaaaatttt acgaagttcg agataagaga ttatgagcat gttgaaccta tgctgatggg
     3421 ctggatgcgc agaattgtta tcaatgcgtc tatagattat atgggccggg aaaatctcgt
     3481 cgccagtaat ggcaatggat atcttcccga ggcagcctgg gaaaaaaaag gaattggaaa
     3541 ttcaggagaa aatcaattgc tgtataaaga actaattgcg ttagtgagaa aattgagccc
     3601 cgcataccgc gtggttttta accttcatgt gatcgacggg tactctcacc aggaaatcgc
     3661 agatatgcta ggcatttctg taggcacatc aaaatcaaat ctatcgaagg caagagcttt
     3721 tcttcaaaaa tatctgatca aagatgataa tggtaatgta ctatgtttta cgtgaaggaa
     3781 gacgatatgg atgatctgtt acgcagagcc gcggaaaact attcggtcga tgccgataaa
     3841 gcccacgact gggaagctat tcgggctgcg attgaagaaa cggctcctgc gcgtgccgtt
     3901 gttcagccga aaagaaaacg ccgatttatt ttttggtggc tgttactcat tcctgcaggc
     3961 tggttcgcaa gcacggaatg gaacaaattc caggcatctc acaaaacagc ccagcaagtg
     4021 cagcaacctg ccaatattac ccgtgaaaaa tcgtccgtac cccatggaaa cagcaacgac
     4081 gataacgcag gttctgcgac cgacgtttcc ggcaacagca acgaaacgaa aacagaacaa
     4141 aagttgtctg atgaaaacgc atatacggtt gcaggcaaca ggtctgatgg gcacaggctt
     4201 aaaacaggga ttgttcctgc aacccctaag ccctttcaag cgacagccga tcaaaagcaa
     4261 caaaatggca caaacatttc gtcgtcgaaa gatcaaccgg ttcagaatga caacgacgcc
     4321 gccaaagttg ttaatgataa agaggcaagt gtcaacaaca gcgtcactcc ccaacaaaac
     4381 gttgttcccg ccgggaatgc atcatcaaac gattcaaaaa aggaaacgac tgcgggtcag
     4441 gcaatgacgt caaccttcgc aaaaaagaaa agcacatcag catcaaatta tttttatgcg
     4501 ggacttattt tggggccgga cataagcttt gtcaaatttc agcaggcgcg cgaggtgggc
     4561 attaacgccg gcgtgatcgc gggatacaag ttcaaaaaat taagtattga aaccgggctc
     4621 atctatgctg agaagaatta ttataccagt ggcgaatatt tcgacaagag caagatccct
     4681 tacttcaata atgcgcaaat aacatccgtt gatggctatt gccatatgtt tgagataccg
     4741 ctgaaccttc gatataattt tggtgaaaaa aagaatcatg catggttcgc gagcgctggc
     4801 ttttcttctt acctgatgca caaagaatat tataacttca attacataag aaacgacagt
     4861 actcacgaag gagcatatcc ttactataat gcttccaaga actggttctc catcctcaac
     4921 ctgagtgcag gttatgagct aaagaccggt aataagacca gcttaaggat agagccgtac
     4981 tacaaacttc caataaatgg tgtgggcatg ggaagtattt cgctttccag cgttggcata
     5041 aacgcaggta tcacaagacg tatcccctaa ggctcgttta cctgggtgtt ataattgatc
     5101 ttccgatcgt cgttgatcga atagctacca tgccaaagca tcatgatcat tacaaaaaca
     5161 aaaactacaa caaaagcaat aaaagcaatc agtgtgaagc gtcttggatc gttcggtgca
     5221 ttgtgattgg ccataagatg gtattaagat tttttgagcg c
//
LOCUS       DASQJI010000020         5955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_462209,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000020 DASQJI010000000
VERSION     DASQJI010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5955
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462209"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VEV83_00740"
     CDS             complement(<1..322)
                     /locus_tag="VEV83_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43662.1"
                     /translation="MTRKPILLICLIVGSFACRAQEKPLSENDKIQNVVINMFQQLAD
                     RDAEKLKIYCTADIMVLENGSVWNFDTLLQKINQNKMISDFKRINRIDFIKTESKGSI
                     SWTSY"
     gene            complement(570..1001)
                     /locus_tag="VEV83_00745"
     CDS             complement(570..1001)
                     /locus_tag="VEV83_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43663.1"
                     /translation="MKKYSVWLKTAAVLQFIAAISHAITLFVTLPPNNETEKQLFMMM
                     DTYKFDFGAGFHRTMGQLLFALSACFCLVCLLGSLLNWYLLRKKVGPEIMKGVVTINL
                     LVFGILFGLTATFAFLMPVILAGLIFIFLIFSRVTMSKPNK"
     gene            1528..1818
                     /locus_tag="VEV83_00750"
     CDS             1528..1818
                     /locus_tag="VEV83_00750"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK43664.1"
                     /translation="MKLFVAGFPNDFDDVDLKDMFGLYGEVTSARFVIDRATGKSKGF
                     GFIEMPDKTEAMETIAILHGIGIKGKKISVQKAEERQSNGNYKPRNDFNRRY"
     gene            complement(1911..2330)
                     /locus_tag="VEV83_00755"
     CDS             complement(1911..2330)
                     /locus_tag="VEV83_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43665.1"
                     /translation="MYDYDARFYTCTNSSQLYCNYRIDDNSYSIEGNTTAVSPELYTN
                     VTSTTDTRFNLSDNNMGVRFNVWFAFDNYANIYPGDITVNGVEVEMDISPGQSEIYLY
                     RNDVTVGGIREGWFNIYYKDTNGQKHDITGNFRVKIN"
     gene            2465..3907
                     /gene="cls"
                     /locus_tag="VEV83_00760"
     CDS             2465..3907
                     /gene="cls"
                     /locus_tag="VEV83_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008808 - cardiolipin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0032049 - cardiolipin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HYK43666.1"
                     /translation="MNYKLVILIIYCLALIFICIRILYDTHSSTKTIAYLLLCIFLPV
                     FGIIFYLAFGINYWKNKLYSQKMNENIKMLNELKKKIPEYNKCTIDPKHFPDDSAELA
                     SMLLKDLQSPLTRNNKIDLLVNGEEKFPELVKSLKAAKHHIHIEYYIFEQDEIGSSVI
                     EILIAKAKEGVQVKFIYDDFGSPSIKKKIEKKMRTAGIEVYPFSKVIFYLLANRINYR
                     NHRKIVVIDGHTGFIGGINVSDRYINNGKQPLYWRDTHVRIEGPGVYYLQFLFMTDWN
                     FCSATKLKPSPEFFAPCDHIKEGALIQIAGSGPDSREPSILFSILEAINLAQEEILIT
                     TPYFIPGDSISNALRIAALGGVTVKLLVPGKSDSRIVNAASKSHYDALLQAGVEIYMY
                     QKGFVHAKTMVTDGKLSMVGTANMDHRSFELNFEVNAVIYDESFAKKLRRVFSEDIKH
                     AKKLNAKQWYERSLLTQFPEKLARLLSPSL"
     gene            complement(3929..4939)
                     /locus_tag="VEV83_00765"
     CDS             complement(3929..4939)
                     /locus_tag="VEV83_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYK43667.1"
                     /translation="MDSLTHIALGACMGEAFAGKTLGRKAMVWGIIAQSIPDIDFIAS
                     TWLDTPSGLLAHRGFTHSLSFALVVALIMAMLANHWHRPHNISFTRWLFFFSAAILTH
                     IFIDAFNNYGVGWFEPFSHERISFNAIYVADPFFSAAPGIAFIMLLLLKQRNKKRQFW
                     WKFGLGISAIYLVYCIVNKTIIDYNVKKQLAQQHIPDTKYFTTPAPLQNWLWYVVAGN
                     DTDYYVGYHSVFSKAKKLSLQRFPRNTSFIDSIHNRKDVRQLIRFSQDFYTIEKRQDT
                     LIFNDLRFGQIIGWQNPHEEFAFHYYLHPDIDNTLVVQRGRFAKWNWDVVKSLCSHIA
                     GN"
     gene            5339..5596
                     /locus_tag="VEV83_00770"
     CDS             5339..5596
                     /locus_tag="VEV83_00770"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43668.1"
                     /translation="MENSAGNIFITYSASFCGTDAYCLGMLSLKTGGDPLNENDWTKS
                     STPVFTTNAAGGAFGPGHNGFFVSPDGTENGSFIMQTLKAV"
     gene            5719..>5955
                     /locus_tag="VEV83_00775"
     CDS             5719..>5955
                     /locus_tag="VEV83_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 43"
                     /protein_id="HYK43669.1"
                     /translation="MKCALFLFIATVSALLVTAQQKTFTNPLLKSGADPYSFYNDGYY
                     YYTNTLADSIVIWKTKNLSELKTAEHRTIFRPPAG"
BASE COUNT         1846 a         1200 c         1209 g         1700 t
ORIGIN      
        1 gatatgatgt ccacgaaata ctccctttag attccgtctt aataaaatca atcctgttaa
       61 tacgtttaaa gtctgaaatc attttgttct gatttatttt ttgaagcagg gtgtcgaaat
      121 tccaaacgct tccattttcc aaaaccatta tatctgcagt acaatagatt tttaatttct
      181 ccgcgtcgcg atctgctagc tgttgaaaca tattaataac aacattttgg atcttatcat
      241 tttcacttag cggcttttcc tgcgctctgc aagcaaaaga gccaacgatt aaacagatca
      301 gcaatattgg ttttctggtc ataagatttc tgattgcgaa aagttgaaca atttggtgtc
      361 gaacgttatc gtattgctgc aggtcggata ttcgttgaac gtccggcctg acaaatgctg
      421 attaaaacat attgttgaag ataacatttg cagcttaaat tattaacgtt gaacgggaac
      481 tgttgctgag tgaagatttg ctagtgattg cttttccctc ctacgctgtt atggtagcat
      541 gccagcgtca gtttgggtgt cagaactaat tatttatttg gcttactcat ggtaactctt
      601 gaaaaaatta agaatataaa gatcaacccc gccaagataa caggcattag aaaagcgaac
      661 gtcgcagtta ggccaaacaa aattccgaac acaagcaggt taatggttac cactcctttc
      721 ataatttcgg gtccgacttt ttttcgaagc agataccagt tcaacaaact tcccaataaa
      781 caaaccagac aaaaacaggc actcagcgcg aatagaagct gacccattgt tcgatgaaaa
      841 cctgcgccga aatcgaactt gtaagtgtcc atcatcataa acaattgctt ttcggtttcg
      901 ttgtttggag gtaacgtaac aaaaagggtg attgcatgac taattgcagc aatgaactgc
      961 aagacagcgg ctgttttaag ccataccgaa tattttttca tatactatgt cgttattccg
     1021 gccgagcagg ttctgatttc tgtcaaacaa ttatttgcct ggtaatttct ttaaagtcag
     1081 cacttgatta acctgtgata acgtaacaat gtctcggtgt aaaaattgcc gctacgtaaa
     1141 aaattttcga tcggcagcat actctgtgat tcctcacgcc ggtactgtcg ccgaattctg
     1201 ttttcgttgc ggaaggtaac atttatcggc ggtgcaattc cgtcgctcga gaacttcaaa
     1261 tgcaatagga aaaaccaagc gatttaccgc gcttgcaata aggaaatgct cagcgtacag
     1321 cagaacaaaa atgtttccct aaatttttag gcataacaat gacctgaagc tcttgcggaa
     1381 aagaaggaaa acagtgctgc cgcctatgaa aggttcacca cctcaaaaaa ttcttacttc
     1441 cctatttaaa tccaaatatg ccgccaaaga gataacttaa ttagctaaca gaccgtctag
     1501 gtgcttattt ttgtcaaaat attctatatg aagttattcg ttgcaggatt tccaaatgat
     1561 tttgatgacg ttgatctgaa agacatgttt ggattatatg gtgaggttac ttctgcaaga
     1621 tttgtcattg atagggcaac gggcaaaagc aagggatttg gctttattga aatgcccgat
     1681 aaaacagaag caatggaaac aatagcaatt ctacatggta tagggatcaa agggaaaaaa
     1741 atatctgtgc agaaagcaga ggaaaggcaa agcaatggca actacaaacc gaggaacgat
     1801 tttaatagaa gatattaata aagaagcgta cgtccgccac gctgaagatt tttacagctt
     1861 tcgagttaat cacccatgga gagtcaataa agactgggat gccaaaggca tcaatttatt
     1921 tttacccgaa aatttcctgt gatatcatgc ttttgtccgt tagtatcctt gtagtaaata
     1981 ttaaaccacc cttcccggat accaccgact gtaacgtcgt ttctatataa gtaaatttca
     2041 ctttgtccgg gtgagatatc catttcaact tccacaccgt ttactgttat atcaccggga
     2101 tagatattag cataattatc aaatgcaaac caaacgttga aacggacacc catgttgtta
     2161 tcggataaat taaaacgggt gtccgtcgta cttgtgacat tcgtatacaa ctccggggaa
     2221 accgcggtgg tatttccttc tatggaataa ctgttgtcat cgatcctgta attgcaatat
     2281 aactggctgc tgttagtgca ggtgtagaat cttgcatcgt aatcgtacat ataatttgtg
     2341 ccggctgatg gcgaacttac accaatgggc tcgtgcgcat gacaaagccg gtctcaatta
     2401 atgtatgctt tttgcaggcg agtattacag ttttaaatag attgcccctg ttaacaaaaa
     2461 cgcattgaac tataagcttg ttatattaat tatttactgt cttgcgctaa tttttatttg
     2521 cattagaatt ctttacgaca cacacagtag tacaaagact atcgcttacc tgctcctgtg
     2581 catttttctg cctgtgtttg ggataatctt ttacctggca tttggcatta attactggaa
     2641 aaataaattg tattcgcaaa agatgaacga gaacataaaa atgctgaatg aactaaagaa
     2701 aaaaattccc gagtacaata aatgcaccat tgatccaaag cattttccgg atgacagcgc
     2761 cgaactagct tccatgttat tgaaagatct gcaaagcccc cttacacgca acaataagat
     2821 agacctgctt gtaaacggcg aagaaaaatt tccggaactt gtgaaaagcc tgaaggcagc
     2881 caaacatcat attcacatag agtattacat tttcgaacag gatgagatcg gcagttctgt
     2941 tattgaaata ttaatcgcaa aagcgaaaga aggtgtgcag gttaaattca tttatgatga
     3001 tttcgggagc ccttctatta aaaaaaagat tgaaaagaaa atgaggacag ccggaatcga
     3061 ggtgtaccca ttttcaaaag tgatctttta cctgcttgct aaccgcatca attaccgcaa
     3121 ccatcgcaaa atagtggtga ttgacgggca taccggtttt attggcggaa tcaatgtaag
     3181 tgacagatac atcaataatg gaaaacaacc gttatactgg agagacaccc atgttcgtat
     3241 tgaaggaccg ggcgtttatt atcttcaatt tctttttatg accgactgga atttttgttc
     3301 tgccacaaag ctgaagcctt cccctgaatt ttttgctcca tgcgatcata ttaaggaagg
     3361 agccttgatt caaatcgccg gcagcggacc agacagccgg gaaccctcta tattgttttc
     3421 tattttggaa gctattaacc tggcgcagga agaaattctt atcaccacac cttactttat
     3481 tcccggtgac agcatatcga atgcgctaag gattgcagca cttggcgggg taactgtaaa
     3541 attgcttgtt cccggaaaat cagattcaag aattgtgaac gcggcttcga aatcacacta
     3601 cgatgcgttg ctgcaggcgg gcgtagaaat ttacatgtat caaaaaggat ttgtgcatgc
     3661 gaaaacaatg gtaacagatg gcaagttatc aatggtcgga acagcgaaca tggatcatcg
     3721 gagctttgaa ttgaattttg aagtgaacgc cgttatttat gatgaatctt ttgcaaaaaa
     3781 attgcgcagg gttttttcag aggatatcaa acatgctaaa aaattaaacg caaagcaatg
     3841 gtatgaacga tcactgctca cacaattccc ggaaaaactt gcacggctgc tttcaccttc
     3901 gctgtgatca cggatctgaa gcagctgttc agtttcctgc gatatgagaa cacaatgact
     3961 tgaccacgtc ccagttccac tttgcaaatc gtcctctttg aacaaccaat gtattatcta
     4021 tatcgggatg gagataatag tgaaatgcaa actcttcatg agggttttgc catcctatga
     4081 tttgcccgaa tcgaagatca ttgaagataa gtgtatcctg ccttttttcg attgtgtaaa
     4141 aatcttgtga gaaacgaatc agttggcgca catctttcct gttgtgtatt gaatcaatga
     4201 acgaagtgtt ccgtggaaat ctttgaagtg ataatttttt cgctttcgaa aacacagaat
     4261 gataacctac ataatagtct gtatcgttcc cagctaccac ataccacaac cagttttgca
     4321 gcggtgcagg tgtagtgaaa tattttgtat ctggtatatg ctgctgtgca agttgttttt
     4381 ttacattgta atcaatgatg gttttattta ctatacaata taccagataa atagcgctaa
     4441 tgcccaatcc aaacttccac caaaattgtc ttttcttatt gcgttgtttc aatagcagca
     4501 acataataaa tgcaatgccg ggcgctgcag aaaaaaaagg gtctgccaca taaatagcat
     4561 taaaggaaat cctttcatga gagaatggtt caaaccaacc tacaccgtaa ttattaaacg
     4621 catcaataaa aatgtgtgtg agtatggcag cgctaaaaaa aaacagccag cgggtgaatg
     4681 aaatattatg cggacggtgc cagtgatttg caagcatcgc cattataagt gcaacaacca
     4741 gcgcaaatga aagagaatgc gtgaagccac gatgcgccaa taacccagac ggtgtatcaa
     4801 gccatgttga agctataaag tctatatcgg gaatactttg tgcgataata ccccacacca
     4861 ttgcttttct gcccaatgtt ttacccgcaa aagcttcgcc catacatgca ccaagagcga
     4921 tatgagtaag tgagtccaaa ccttttattt aatttaataa agttatttaa tgagactgaa
     4981 aacggcagcc cggtttggct cgatatgcaa tctgcagcag acagcagcgg acatgacaaa
     5041 cacatagaat ttatgcgctt gagaattcgt ccccagatcc aactacggta aattggcaat
     5101 taaaaggaga attaagtgac ccgccagata attgggcgat cgacgcgtct ctgtttgaat
     5161 acaatggctc atcttaatct ttgtggtccg gatagagtac tgctttgggc ggccagcaaa
     5221 atacttacat cgcacagctt tcaaatcctt ataccattga cgcacccgtg ttttaatttc
     5281 ttctccaact tatgattggg agaaaaacgg atttgccata aatgagggtt cggaagaaat
     5341 agaaaattct gcgggcaaca tttttatcac ctactccgcg agcttctgtg gaaccgatgc
     5401 ctattgtttg ggaatgcttt cgttaaaaac aggcggcgat cctttaaacg aaaacgactg
     5461 gacaaaatca tcgacgcctg tttttaccac caacgcagcc ggcggcgcat tcgggcccgg
     5521 acataacggt ttttttgttt cgcccgatgg caccgagaat ggatcattta tcatgcaaac
     5581 cctcaaagcg gtttaggctg tggcgatagc cggaatcgga gaatgcaaaa gtttacatgg
     5641 aatgcgaatg gaacgcctaa ttttgcgcgc ccggttgcta ttgatacgcc aataaaaaac
     5701 ccttcaggtg aatagcagat gaagtgtgcg ctttttttat ttattgcgac agtaagtgcg
     5761 cttcttgtta ctgcgcagca aaaaacattt acgaacccgt tgctaaaatc aggcgcagac
     5821 ccttacagtt tttataatga cggatattat tattacacga acaccttagc cgatagcatt
     5881 gtaatttgga aaacaaaaaa tttgtccgag cttaaaacag cggagcacag aacaattttt
     5941 cggccgcccg caggc
//
LOCUS       DASQJI010000021         6298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2765892,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000021 DASQJI010000000
VERSION     DASQJI010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6298
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2765892"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VEV83_00780"
     CDS             <1..234
                     /locus_tag="VEV83_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43670.1"
                     /translation="RPVGDTAQSLTRLNSAFANAFNILEETDMPPTVAVREAVTSSNM
                     TLKKLLSTWNEIKANQLRIVNDALNKAGYQPIK"
     gene            complement(359..1393)
                     /gene="ruvB"
                     /locus_tag="VEV83_00785"
     CDS             complement(359..1393)
                     /gene="ruvB"
                     /locus_tag="VEV83_00785"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HYK43671.1"
                     /translation="MSNPNLHTEKSELTVAEREYENSIRPKEIIDFAGQQQIIANLVI
                     FIKAAKLRGEALDHILFHGPPGLGKTTLSRIVANELGVNIRETSGPVIEKPGDLAGLL
                     TNLETNDVLFIDEIHRLSNVVEEYLYAAMEDFRIDIMIDTGPNARSIQINLNQFTLIG
                     ATTRSGLLTAPLLSRFGIKSRLEYYDSATLKKIIERSATILNTAISDDAAGEISRRSR
                     GTPRVANGLLRRVRDFAQVLNDGIIDLGITQHALKALNVDEHGLDDMDNRILTTIIQK
                     FKGGPVGISTIATAVGEEPGTIEEVYEPFLIQEGFLQRTPRGREVTYKAYEHLGKRPN
                     AGGYAGNLFS"
     gene            complement(1403..1846)
                     /locus_tag="VEV83_00790"
     CDS             complement(1403..1846)
                     /locus_tag="VEV83_00790"
                     /inference="COORDINATES: protein motif:HMM:NF016535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HYK43672.1"
                     /translation="MRYLLMFLTLLVGGLMPVQAVLNTRLGRQIGGPLMGSLMSFTVG
                     LICLLVLNLAINTSAVINLKVASTGPWYIWLGGFIGAIFVGYITWVNQQQGIALTFAL
                     AISGQMFLSLMIDHYGLFGAAVRTITLEKIIGVGLIICGIVLIKK"
     gene            1973..2638
                     /locus_tag="VEV83_00795"
                     /pseudo
     CDS             1973..2638
                     /locus_tag="VEV83_00795"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
     gene            2662..3969
                     /locus_tag="VEV83_00800"
     CDS             2662..3969
                     /locus_tag="VEV83_00800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43673.1"
                     /translation="MSVTTPIEPRWPSWKKVVFRFLFVYFLLCMAPWTWLDTVPGVSY
                     ITGYYYQLMDWAVNAANDYIFHVKKVLVPPNGSGDTSYAWAQLWLFIWLGFVGCIAWT
                     LTDTERTNYRALKYGLCLFMRYYVAMIAFSYGIIKLFALQMPFPNLSQLATPLGDFLP
                     MRLSWMFLGYSAPYQIFAGGLEVAVGVLLLYRRTVTLGILLATAVFTNVMMLNLSYDI
                     PVKIFSIQLVLMCLYLLANEYDRIVCFLFLNKPAPVCNTYDFSYTTRWMRVTRIVLKT
                     VFIIVAVGLTFYQSWGWYSEVSHPQQIKPIKPGVYDVSVFARNGDTLAAFTTDTTRWQ
                     DVIFDWNGSGSIKTSDTVFRRVYNRSYFSYTTDTLKNTMTFKKFAGDTSTIMTMRYAL
                     PDTSTIRLWAKEMNDSLYLELKRSHRHFQLAERQFHWLSEYNR"
     gene            4141..4830
                     /locus_tag="VEV83_00805"
     CDS             4141..4830
                     /locus_tag="VEV83_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HYK43674.1"
                     /translation="MDFGKEFEKYAVKHRGLNSNTLQGYKQHTVTNLTPYIIEERPLN
                     VASMDVFSRLMMDRIIFLGEPIDDYVANIVTAQLLFLDSTDRTRDIQMYINSPGGSVY
                     AGLGIYDTMQFVSPDVSTICTGIAASLGAILMCAGVKGKRSALKHSRIMLHQPFGSIG
                     GQASDIEITAKEIRKIKHELYSIIAHHTEKDIAQVEQDCDRDFWMNADESKAYGVVDE
                     VLVTNPRKVNK"
     gene            4897..5529
                     /locus_tag="VEV83_00810"
     CDS             4897..5529
                     /locus_tag="VEV83_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HYK43675.1"
                     /translation="MVDMKYIDPLRLNDEEEEQPKEDKQEQSPYLMKKMEQLFLKKRA
                     VYLWGPVEDKSARDIVSKLLLLDADKPGQEIKFYINSPGGVVTSGMVIYDTMRMIQSP
                     VVTICMGLAASMGSILLSGGVKGKRLIFPHGEVMIHQPSIGGYFQAASADIEIHAKQM
                     QRTKEISAQILAQNTGKSFERILKDFDRDYWMDAKEAVDYGIVDTVVEKL"
     gene            5619..>6298
                     /gene="clpX"
                     /locus_tag="VEV83_00815"
     CDS             5619..>6298
                     /gene="clpX"
                     /locus_tag="VEV83_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HYK43676.1"
                     /translation="MAKQTNLHCSFCGRSREEVKILIAGQEGHICENCIEHAQEIIMQ
                     ELQVRDENRTTQYKFNIRKPVEIKNYLDQYVIGQEDAKKILSVAVYNHYKRITRKQQT
                     DDVEIEKSNIIMVGETGTGKTLLAKTIAKLLNVPFAIVDATVFTEAGYVGEDVESMLT
                     RLLQACNYDVSAAEKGIVFIDEIDKIARKGDNPSITRDVSGEGVQQGLLKMLEGTEVL
                     VPPQGGRK"
BASE COUNT         1776 a         1371 c         1502 g         1649 t
ORIGIN      
        1 aggcccgttg gcgacacggc gcaaagcctc actcgtttga acagtgcttt tgcaaacgca
       61 ttcaatattc tggaagaaac tgatatgccg cccaccgttg cggtgcgaga agcagtaaca
      121 agctcaaaca tgacactgaa aaaattgctt tcaacctgga atgaaatcaa ggcaaatcaa
      181 ttgcgaattg taaatgatgc gttgaacaag gcgggatatc agccgataaa ataattaaat
      241 cgtcttcaac acagcgcgtt gtaattacac agcggcgaat agtattaagg ccgaggatat
      301 aaaagaattt ttccgccagc aagaaatatg tggttagttt ttaattgctg cgttcacgtc
      361 aactaaataa attccctgcg tagccgccgg cgtttggtct ttttccgagg tgctcataag
      421 ctttgtacgt cacctcccgg cctcttggag ttcgctgcag aaatccttcc tggatcaaaa
      481 acggctcata cacttcttcg atagtaccgg gttcttcgcc caccgcagtg gcgatcgtgg
      541 aaataccaac ggggcctccc ttaaattttt gaatgatcgt agttagaatg cggttgtcca
      601 tgtcatcgag accatgttca tccacgttta aggctttcaa agcatgttgt gtaatgccga
      661 gatcaataat gccatcgttt aacacctgtg caaaatctct cacacgccgc aataaaccgt
      721 ttgctacgcg tggcgtgcca cgactccttc gtgagatctc tccagcggcg tcatcgctta
      781 tggctgtatt taagatggtc gcactgcgtt caattatttt tttcaatgtt gccgaatcgt
      841 aatattccaa tcgcgatttt attccgaatc ttgaaagtag aggcgccgtt aataatccac
      901 ttcgcgttgt tgctccaatg agcgtgaatt gattgagatt tatctggatg ctccttgcgt
      961 taggcccggt atcgatcata atatcgatcc tgaaatcttc catcgcagcg tataaatatt
     1021 cttcgacgac attgcttaaa cgatgtatct catcgataaa taaaacgtca ttggtctcaa
     1081 gatttgtgag gagaccagcc aggtcgccgg gtttttcgat caccggaccg cttgtttcac
     1141 gaatgtttac gccaagttcg ttggcaacga tcctgcttag agtcgtcttt cccaaaccgg
     1201 gcgggccatg aaacagtata tgatctaaag cttcgccgcg cagttttgcc gctttgataa
     1261 aaataacgag gttggctatt atttgctgct gacctgcgaa gtcaatgatc tcttttggcc
     1321 tgatgctgtt ttcgtactcc cgttctgcaa cggtcaattc cgacttttct gtatgtaagt
     1381 ttggattgct catgtagccg ccctatttct taattaaaac gatcccgcaa atgatcagcc
     1441 caacaccgat gatcttttcc aaagttattg ttcgtacagc ggcgccaaat aatccgtaat
     1501 ggtcgatcat taaagagaga aacatttgcc cgcttatcgc cagcgcaaaa gtaagtgcaa
     1561 ttccctgttg ttggtttacc caggtgatat agccgacgaa aatggcgccg ataaacccgc
     1621 cgagccagat ataccacggc cccgttgaag caactttcaa atttattacc gccgatgtat
     1681 ttattgccag gttcaggaca agcaggcaaa ttagtccaac ggtgaaactc ataagtgagc
     1741 ccatcagtgg cccgccgatc tgcctgccaa gccgcgtatt aagaactgcc tgtaccggca
     1801 taaggccgcc aaccaataaa gtgaggaaca tcagtaagta gcgcatttta attttttttg
     1861 gaagataaaa caatcaactt tgaaatgaaa aaacaccgtt tgtatgttta cggtttgcgc
     1921 ggagcacgcg aacgcagaag acgacaacta atatcaaaaa acaaataata aaacttctaa
     1981 aacactaacc attatgaaaa ttggaataat cggatccggc caggtagggc gtgcccttgc
     2041 caaagcattt aaaagtgaag gctacgatgt aatgctcggc acgcgaaaca catcaaacga
     2101 acacgtggtg cagttcaatg acgaagcaaa gatcgacgtg ggcacttttg atgagaccgc
     2161 aaaatttggt gacattgttg tgctggccac aaagggaact gccgctgaag aggcagttca
     2221 tcttgcgggc aaggaaaatt tagatgggaa gatcgttatc gacaccacca atccaattgc
     2281 tgactcaccg ccggtaaacg gcgtgctgca ttacacgaca tccctcgaga cctctatgat
     2341 ggaacgtttg cagcaggtgg tgccgggagc taagtttgtg aaggcgttca acattgtcgg
     2401 tcacgcgctc atgtacaaac caaaactgca gggtggaaaa ccaaccatgt ttatttgcgg
     2461 caatgatgat gatgcaaaga aaacagtgac aggcatcctt gacaaattcg gttgggaaac
     2521 agaagatttt ggtaaggccg aatcagcacg cgcgattgag ccgctggcga tcctttggtg
     2581 cattccgggt tttttgcgga acagttggat gcatgcgttt aagttgctaa gaccctgacg
     2641 caacgttcat aaaccaatta tatgagtgtg actacgccga ttgaaccacg atggccatcg
     2701 tggaaaaagg tcgtgttcag gtttttattt gtctatttcc ttctctgcat ggcaccgtgg
     2761 acgtggctcg acacggtgcc gggcgtcagc tacattaccg ggtattatta ccaattgatg
     2821 gattgggcgg ttaatgccgc caacgactat atttttcatg tgaaaaaagt gttggtgccg
     2881 ccaaatggca gtggcgacac gtcttatgca tgggcgcagc tctggctttt catatggttg
     2941 ggttttgtcg gctgcattgc gtggacctta accgatacag agcgcaccaa ctatcgcgcg
     3001 ttaaaatacg gtctttgcct gtttatgcgg tattatgttg cgatgatcgc tttttcgtac
     3061 ggcattatta agttgttcgc attgcaaatg cctttcccga acctgagtca actcgccact
     3121 ccgctcggtg attttttgcc gatgcgttta tcctggatgt ttctcgggta ttcggcgcct
     3181 taccagatct tcgcgggcgg gttggaagtt gctgttggcg ttttgcttct gtatcggaga
     3241 acggttacac ttggcatttt gctcgccacg gcagtcttta cgaacgtgat gatgctaaac
     3301 ctgagctacg acatccccgt gaaaatattc tcgatccaac tggtgctcat gtgcctttat
     3361 cttttggcga acgagtatga tagaattgta tgctttcttt tcttaaataa accggctcct
     3421 gtttgcaata cgtatgattt ttcttatacg acaagatgga tgcgcgttac gcgtatagtt
     3481 ttgaaaactg tgtttattat tgtggcggtt ggactcacgt tctatcaaag ttggggttgg
     3541 tattcagagg tcagccatcc gcagcaaatc aaaccgatca aacccggcgt gtacgatgtg
     3601 agcgtctttg caagaaacgg cgacacactt gcggccttca ccactgatac tacgagatgg
     3661 caggatgtga tcttcgactg gaacggctca ggcagcatca aaacatcaga caccgtgttc
     3721 aggcgtgttt acaaccgctc ttatttttca tacacaaccg acaccctgaa aaacacgatg
     3781 acgttcaaaa aatttgccgg cgatacttcc acgattatga cgatgcgtta tgctttacca
     3841 gacacgagca cgatccgcct ttgggcaaag gagatgaatg attcactgta tcttgaactg
     3901 aaacgaagcc ataggcattt tcaactggcc gaaaggcagt ttcattggct gagtgagtat
     3961 aatcgttaac caggaatcag gaattagcgg attaggattt aggaattagg atttccaacc
     4021 tcaacctcaa acttcaaacc tcaaacctca aacatttcac tgtccttttg tctcgatatt
     4081 tgttttgcat ggtatttggt tgcaataggt ttctatttat cttcatctaa ataaatgaac
     4141 atggattttg gaaaggaatt tgaaaaatat gcagtaaagc acaggggtct caactcaaat
     4201 actttacaag ggtataagca acatacagtc accaatctca caccctatat aattgaagag
     4261 cgtccgttga atgtggcaag catggatgtg ttcagccggc tgatgatgga ccgcatcatt
     4321 ttcttaggcg aaccgattga tgactatgta gcaaatatcg ttaccgcgca gttgctgttt
     4381 ctcgacagca ccgacagaac aagagacatt caaatgtaca tcaacagtcc cggtggaagt
     4441 gtttatgccg gccttggcat ttacgataca atgcagttcg tgagccctga cgtttcaacg
     4501 atctgcaccg gtattgctgc aagccttggt gcgatcctga tgtgcgccgg tgtgaaagga
     4561 aaacgaagtg cattgaagca tagtcgtatc atgctacatc aaccgttcgg ttctatcggc
     4621 gggcaggcaa gtgatataga gatcacggcg aaagaaatcc ggaagatcaa acacgaattg
     4681 tatagcatca tcgcacatca cacagaaaaa gacatcgccc aggtagagca ggattgtgat
     4741 cgcgacttct ggatgaatgc cgatgaaagc aaagcctatg gtgtggttga tgaagtgttg
     4801 gtcacaaacc cgaggaaggt taacaagtga ggagggaagt aggaattcgg aattaggaat
     4861 tcggatttga aagcttacta aaaaaattta agaattatgg tagacatgaa atatatagat
     4921 ccgcttagat tgaatgacga ggaggaggag caaccgaagg aggacaagca ggaacaatct
     4981 ccatacctca tgaaaaaaat ggaacagctt tttctcaaga agagagctgt ttacctgtgg
     5041 ggaccggtgg aagataaatc tgcgagggac atcgtgagta aattattgct gctcgatgca
     5101 gacaaaccag ggcaggaaat aaaattttac atcaacagtc cgggcggcgt cgtgaccagc
     5161 ggcatggtga tctatgacac gatgcggatg atacagtcgc ccgtagtaac gatatgcatg
     5221 gggctcgctg cgagcatggg ttctatcctt ttgagcggtg gtgttaaagg caaacgcctc
     5281 atttttccgc acggggaagt gatgatccac caaccgagca ttggtggtta tttccaggca
     5341 gcaagtgcgg acatagaaat acacgctaaa caaatgcagc gcaccaaaga gatcagcgcc
     5401 cagatacttg cacagaacac gggcaaatcg tttgaaagga tcttgaaaga tttcgaccgc
     5461 gattattgga tggatgccaa agaggcagtt gattatggta tcgtagacac cgtggttgaa
     5521 aagctataag ggcccgaata acaaatttgt aaaaggccgc cggtaaaact attaagtttt
     5581 atctttgttt agctttttca ggcaatcctt tatcatatat ggcaaaacaa acaaacttgc
     5641 attgctcctt ttgtgggcgc agccgtgagg aagtaaagat ccttatcgcg ggccaggaag
     5701 gacatatttg cgaaaactgt atcgagcatg cccaggaaat tatcatgcag gaattacagg
     5761 ttcgcgatga aaaccgcact acgcaatata aattcaacat tcgcaagcct gtagaaataa
     5821 aaaattacct cgaccagtat gtgataggcc aggaagatgc caagaaaatt ttatccgtcg
     5881 cagtttacaa tcattacaaa cgcatcacgc gcaagcaaca aacagatgat gttgaaatag
     5941 aaaaaagcaa catcatcatg gtgggcgaaa ccggcaccgg gaaaaccttg ctggcaaaaa
     6001 cgatcgccaa acttctcaat gttccattcg ccattgttga tgcgaccgtt ttcacagagg
     6061 ctggttatgt gggtgaagac gttgagagca tgcttacacg tttgttacag gcttgtaatt
     6121 acgatgtttc ggctgcggaa aaaggtattg tgttcattga tgaaattgat aagatcgcac
     6181 gcaaaggaga taacccttcc attacacgcg atgtaagcgg cgagggtgtg cagcagggat
     6241 tattaaagat gctggaagga actgaagtgc ttgtgcctcc gcaaggcgga agaaaaca
//
LOCUS       DASQJI010000022         5327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2151457,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000022 DASQJI010000000
VERSION     DASQJI010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5327
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2151457"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VEV83_00820"
     CDS             complement(<1..231)
                     /locus_tag="VEV83_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYK43677.1"
                     /translation="MDFKLTEEHLMIRQAARDFANQECLPGVIERDEKMIFPKDQIMK
                     LGELGFLGMMVNPKYGGSGLDTVSYVIAMEEIS"
     gene            663..3785
                     /locus_tag="VEV83_00825"
     CDS             663..3785
                     /locus_tag="VEV83_00825"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK43678.1"
                     /translation="MSYCKYFPCVITALLLFLPATRVEAQTQRPNIILILGDDIGYQT
                     LTCNGGTSYSTPRLDSLAQQGMRFTQCHGSPLCSPSRFMLLTGKYNFRNYTHWGKMDT
                     SERTIANMMKDAGYKTACYGKWQFDGGDASVHAFGFDRYCIWSPFQQEGDPRYKSPHL
                     YTNGAFIADEETHNKYSEDIFIDSVLNFLDSNKSTPFFVYYPMVLAHSPFSPTPDDSD
                     FPTWSDSDVVNNVSDTSYYHSMIKYMDEKIGQIVNKVKTLGIENNTAIIYVGDNGTPG
                     KVTEIVDDTVATGQKGKTNIYGTHVPLIVYWPGTVNAGVVNNNLVDFTDFLPTIAGIA
                     NNPLPTTYGPLDGVSFFPQLTGQTATPRDWIFFHYDPHPHDNRYRRWVQNATYKLYDT
                     SFYKHKRTFYNIALDPRETNAIPDSTLTDGERSIQAQFIDVINSYRAQGTPLLSETDL
                     SATTDSSSIATDTIYTNGGSTISSSGVVWSSDPNPTLLTGNYSSGTAGTGWYKSNMHG
                     LSASTTYYVRSYAINFAGVGYGKQKIFRTHLGAPHAIASRAIDTSSFIAKWNTLSGAT
                     SYRLDVSTLQTFCTFKLLKLNEGFDSGITAPKGWKISSGIVASTKKFGLAAPSLQFRE
                     TGQQVTTKVLFGPAVKLSFWLQGSIGNPGNLLVEGFNGINWTTIDNLTNIQAQPAVVL
                     YDSLSTPRLGSDFTQFRFTYTKTNGLLFFDDISINFNKITPSLLTGYEDLVVNDTAQS
                     VTGLTRNANYYYRVRATNADGSSPNSNVISAKACNPPLITNVTSLNLLCSGDNGGSIQ
                     LSATGVAPLLYNWSGPNGFTSSNKDINNVAAGTYKIIVTSNDGCATDSSVVLTEPAAL
                     SATLSANPILCNGGTTSLIATATGGTGNYHYTLSDSANNLTGPQNDSQFVVSSGTYVV
                     TVTDDNGCLFTSESIQVNDGTNGCGGMVAVNSNQSRSGNVTAKNNSGLNASIYPNPSS
                     TAFTLRIQSNDNANVKITILDVYGRKVYQAEGRGHDTFLFGAEFVPGTYLVKVVQGKN
                     IKTFKILKGT"
     gene            4489..>5327
                     /locus_tag="VEV83_00830"
     CDS             4489..>5327
                     /locus_tag="VEV83_00830"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK43679.1"
                     /translation="MAQTQRPNIILILADDIGYNTLTCNGGTTYSTQNLDSLAQQGMR
                     FTQCHASPLCSPSRFMLLTGKYNFRNYTLWGKLDTGQKTIGNMMKDAGYKTACYGKWQ
                     LDGGDASVRTVGFDNYCLWDPFQSENQPRYKNPLIYTNGAYVSSPMTADKYGEDIFTD
                     SVLNFLDSNKSVPFFIYYPMVLAHYPFSPTPDDSDFSTWSDSNVINGVSDTSYYYSMI
                     KYMDKKIGLIINKVKSLGIENNTVIIYTGDNGTPGKITEIVGDSIAMGQKGKTNELGT
                     HVP"
BASE COUNT         1594 a         1160 c         1106 g         1467 t
ORIGIN      
        1 tgaaatttct tccatcgcaa taacatagct taccgtatcg agtccggagc cgccatattt
       61 tgggtttacc atcataccca aaaaacccag ttcgccaagt ttcattattt gatcttttgg
      121 aaagatcatt ttttcatcac gctctatgac ccctggtaaa cattcctggt ttgcaaagtc
      181 acgtgcagcc tgccgaatca tcaaatgctc ttcagtcaat ttaaaatcca tagccgttaa
      241 gtttcagcaa aaatacacta acggctgtat gttcttgaac aactaagttt tgaacatgct
      301 gaataaatct tgcttttcaa tgctaaatgt atttatctta gttcacgtgt aatatcatgg
      361 agtgaaacat cgcccgaaaa atggcactcc ctggaattat gtgtattttc tgcttactga
      421 aatcatcgct tacctctgaa tttcattttt cgttcccaac aaaactgcgc gtatgattgt
      481 aacaagtatt caacgatcaa caatcgcgcg cgtgccgtga acacttgtta gacctgtgaa
      541 aaattactgt tgacaaattt tgagaagacg cctgctcaaa tcaattgtgc ggacgtcgac
      601 gaaattgaaa cgtgcatact atcaagccaa tatcaatgtg taaccgtgta cattttagca
      661 aaatgagcta ttgcaagtat tttccatgcg ttattaccgc tttacttctt tttcttcctg
      721 caacgcgagt agaggcacaa acgcagagac ctaacatcat tttaatactg ggcgatgata
      781 taggttatca aacgctcact tgcaacggcg gaacctcata ttcaacgccg cgacttgata
      841 gtttagctca gcagggtatg cgcttcaccc agtgccacgg ttctcctttg tgctcaccct
      901 ccaggtttat gctgcttacc ggcaaataca attttcggaa ttacacccac tggggcaaaa
      961 tggatacaag tgaaagaacc attgcaaata tgatgaaaga tgcaggctat aaaacggcgt
     1021 gctatggcaa atggcaattc gacggcggag atgcttctgt ccatgcattc ggattcgaca
     1081 ggtattgtat atggagcccg ttccagcaag aaggagatcc aaggtacaaa agtccgcacc
     1141 tgtatacaaa tggtgccttt atcgcagatg aagaaaccca taacaagtat agcgaagaca
     1201 tttttattga ctcggtactg aattttttag atagtaacaa atcaacacct ttttttgtgt
     1261 attatccgat ggtattagcc cacagccctt tctctcctac ccctgatgat tccgatttcc
     1321 caacttggag cgattccgac gtcgtcaaca atgttagcga cacctcctat taccattcta
     1381 tgataaaata tatggacgaa aaaattggtc agatcgtaaa caaagtcaaa acgctgggaa
     1441 tagaaaacaa tacagctatc atttacgtag gagataacgg aacaccggga aaggtcacag
     1501 aaatagtgga tgatactgtt gcgacgggtc aaaaaggaaa gactaatata tatgggacac
     1561 acgttccgct aattgtttac tggcccggta ctgtcaatgc aggagttgtc aacaacaacc
     1621 tggttgattt tacagatttc ttaccaacga tcgccggtat tgcgaataac ccgttgccca
     1681 ctacatatgg tccactggat ggagtcagtt ttttcccgca actaacaggt cagaccgcaa
     1741 caccaagaga ctggattttt tttcattacg atccacatcc tcatgataac aggtacaggc
     1801 gttgggttca aaatgcgacg tacaaattat atgacacctc tttttacaag cacaaacgca
     1861 ccttttacaa tatagccctc gatccaaggg aaactaatgc aattccagat agcactttaa
     1921 ccgatggtga acgttcaata caagctcaat ttatagacgt tatcaatagc tatagagcac
     1981 agggcactcc gctgttgtca gaaacagacc tttcagcgac gactgactcg tcgtcaattg
     2041 cgacagacac tatttacaca aatggcggct cgactatttc ctcttcaggc gttgtgtgga
     2101 gcagcgatcc gaatcctaca ttgctcacgg gtaattacag ttccgggact gcagggactg
     2161 gatggtataa aagtaatatg cacgggctaa gcgccagtac aacgtattat gtaagatcat
     2221 atgcgattaa ctttgcgggt gttggatatg gaaaacaaaa gatcttcagg acccatttgg
     2281 gggcacctca tgcaatagct agcagagcca tagatacgag cagctttata gcaaaatgga
     2341 ataccttaag cggagccacc agctacaggc tcgatgtaag cacgcttcaa acattctgca
     2401 cctttaagct gttaaaactg aacgaaggat tcgacagcgg aattactgca cccaaaggat
     2461 ggaaaataag ttcagggatt gttgccagca ccaaaaaatt tgggttagct gcaccttcac
     2521 tgcaattccg cgaaacgggg cagcaggtta caaccaaggt gctatttggg cctgcggtta
     2581 aactgagttt ttggttacaa ggttcaatcg gcaatccagg taatttgttg gtggaaggat
     2641 tcaacggcat taactggaca accatcgaca acctgacaaa tatccaggca cagcctgcgg
     2701 tggtgctata cgatagtttg tcaactccgc gtttgggcag cgactttact caattcaggt
     2761 tcacttatac caaaacaaac ggtcttcttt tttttgatga catctcaatc aattttaata
     2821 aaataacccc ctctttgcta accgggtatg aagaccttgt agttaatgat acggctcaaa
     2881 gcgtaacagg actgacccga aacgcaaatt attactatcg cgtgcgtgca accaatgccg
     2941 acgggagttc acctaactca aacgtgatct cagcgaaagc atgcaatcct cctttgatca
     3001 caaacgtaac atctcttaac ttactttgtt ctggcgacaa cggcggttcg attcaacttt
     3061 ctgcaacggg tgttgcaccg ctgctgtata actggagcgg gccgaacgga tttacttcat
     3121 caaataaaga catcaacaac gttgcagccg gaacgtataa gatcatcgtt acttcaaacg
     3181 acggctgtgc taccgatagc agtgttgttt taactgaacc agccgcctta tcagctactt
     3241 taagtgctaa cccgatttta tgcaacggtg gcacgaccag tttgattgcc acggccaccg
     3301 gaggaaccgg gaactatcat tatacattat cagattctgc aaataacctc actggtccgc
     3361 agaatgacag ccagtttgta gtttcttcgg gcacttatgt ggtcactgta acggatgaca
     3421 acggctgttt atttacatcg gaatccatac aggttaacga tggtacgaat ggatgtggag
     3481 ggatggttgc ggtaaatagc aaccaaagca gaagcggaaa cgtcacggca aaaaataatt
     3541 ccggactcaa tgcgagtata tatccgaatc cttcctcaac tgcgttcact ctgcggattc
     3601 agagcaatga caacgcaaat gtgaaaataa caatcctgga tgtttacgga agaaaggttt
     3661 accaggccga aggacgcgga catgatacat ttttatttgg tgccgaattt gtaccgggaa
     3721 catatttagt aaaagtggtg cagggaaaaa atatcaagac ctttaaaatt ttgaaaggca
     3781 catagctgct ttctattggg aacatctata ggttccagca ttcagtttct atcgcatttt
     3841 ttttgaatga ctgcagtcac caaattttcg aaaattatta agggcgcata aagtaaaccg
     3901 ggaaaagtga tcggagcaac accgttgcgc atactttcga aaggataaaa aatatggttg
     3961 gctgatgtgg ccatagaaat gacgttattt cgaataaaat aaagcgccga aaatattaca
     4021 cggcgcttct actctgtaat tttgaatcga acttaagcaa cctactgatg tgcgttctga
     4081 gtatttcctg tgttggtctc tgctgaaaaa gttcgttcta ttgctcctgt acctttcgtg
     4141 gtaagtttaa ccttcatgcg gtggcatggc ggttagcgat ttccggttta aatttttttg
     4201 aacgggaaaa atgtggcatt ggttgaaaac ttgaccgggc tatgaagacc actttcgtca
     4261 acaaataatg gatttgctat ttgtgagaca aaggatttga ttcatggaat ttgatcgaag
     4321 aaaagattcg ttgaattaaa gctcaaagtc tttagaatgt catttctcac tgcttaaacc
     4381 aatatcctca tgttcccttt ccaatttccg aaagccgaat tcttttgccg ttcactgtat
     4441 gttcttacgc ttacattggc cttagacgct ctgatttcag aatgcgccgt ggcgcaaact
     4501 caacggccta atatcatttt aatattagcc gatgatatag gttataacac acttacgtgc
     4561 aatggaggca caacctattc aacacagaat ctggacagcc tcgctcagca aggtatgcgc
     4621 tttacacaat gccatgcttc gcccttgtgt tcgccatcaa ggtttatgct gcttacagga
     4681 aaatataatt tccggaatta taccctttgg gggaaactgg acactggcca aaaaaccatt
     4741 ggtaacatga tgaaagatgc aggctataag acagcttgct atggaaaatg gcaactggac
     4801 ggcggagatg cgtctgttcg tacagtggga tttgacaatt attgtctttg ggatcccttc
     4861 caatcggaaa accagccgag atataaaaat cctctcatct acacaaacgg cgcctacgtt
     4921 agttctccca tgactgccga taaatacggc gaagatatct ttaccgattc tgtgcttaat
     4981 tttttagaca gcaacaaatc agtccctttc tttatatatt atccgatggt tttagctcac
     5041 tacccgttct cccccactcc ggatgattca gatttttcaa catggagcga ttctaacgtg
     5101 attaatggtg taagcgatac ctcatattac tattctatga taaaatacat ggacaaaaaa
     5161 atcgggctga tcataaataa agtcaaaagc ctgggtatag aaaataatac agtcattatt
     5221 tacacaggag ataacggaac gcccggtaag attacagaaa tcgttggtga cagtattgcg
     5281 atgggtcaaa aaggaaagac aaatgagctc ggtacacacg ttccttt
//
LOCUS       DASQJI010000023         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1537, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000023 DASQJI010000000
VERSION     DASQJI010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            535..1392
                     /locus_tag="VEV83_00835"
     CDS             535..1392
                     /locus_tag="VEV83_00835"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK43680.1"
                     /translation="MKKFTTAFLFALFIPAYFFGQSDTIVLRDIKWDKSSPAGSKELF
                     IPSKGALLAGLLYKPNGSDKHPTLLLLHGYPGNERNLDLAQVVRAHGWNVIFFDYRGS
                     WGSGGKFGFQNCVEDVVNVVAFCNKYQDSLHIDTSNIVLFGHSMGGWVCLKALEQLPQ
                     VKKGFALSTWDILSDFKNVHDEQQMVEAAKTPGLDGGYFVLNSTLTEIFTPVIKEPTY
                     FDLVANTSMLANKQIIMLDEHPGNKQIAEAIRNSATSFFEYDVWDTDHGFTNKRVSLM
                     NKVLAFLDR"
BASE COUNT          475 a          325 c          329 g          473 t
ORIGIN      
        1 gctttttcag tgtcaaagtc tgatgtcgac aaagtttgca ggtatataat taatcaacaa
       61 gagcatcata agaaagtgag tttcgaagag gaatacaata agtttcttaa acattatcaa
      121 agaacgttga gacaataagg ggataaggtc catcattcac ttattggttc gcttgttact
      181 aagataataa ggtagttgat tttactttca gctgcccggt gaaattaata tcctggcttg
      241 tgctctattg agattcctgt tcatttatga gaaaactcat aagaagattc ttttcgaaaa
      301 agatagcgcg gccagcaaag tttttgctct ctctattagc tttctggata tttgtgcaaa
      361 cctgtgagac aaacaatcgt cacagataac aaggatgacc actgatcatt ttcatgcaac
      421 actgatacac gctttcgttt gcgatctctg ttacctctgc gcgaactaaa ttatattgca
      481 ggcatgtgcg aaaatctgtg ataaaaccta ccatcagatc tttcaattac aaacatgaaa
      541 aaatttacga cagcattttt atttgctctt tttattcccg cctatttttt tggacaatca
      601 gatacgatcg ttttaagaga tattaagtgg gacaaaagtt ctcctgcggg ttcgaaagaa
      661 ttatttattc cgtcaaaagg tgctctgctt gcggggttac tttataaacc taacggaagt
      721 gacaaacatc ctacactcct gctgttgcac ggatatcccg ggaatgaacg caatctcgac
      781 ctcgcgcagg ttgttagagc gcacggatgg aatgtgatct ttttcgatta taggggttcg
      841 tggggaagtg gcggaaaatt cggctttcaa aattgcgtag aagatgtcgt gaacgttgtc
      901 gcattttgca ataaatacca ggactcgtta cacatcgaca cttccaatat tgtattgttc
      961 ggacacagta tgggcggatg ggtttgcctt aaagcgctcg aacaactgcc gcaagtaaaa
     1021 aagggatttg ctttatcaac atgggatata ttaagcgact ttaaaaatgt tcatgatgaa
     1081 caacaaatgg ttgaagcggc aaaaactccg ggtctcgatg gcggctactt tgtgttaaac
     1141 tcaacgctca ccgaaatttt tactccggtg atcaaagagc caacatattt tgacctggtg
     1201 gccaatacct cgatgctggc gaacaaacag atcatcatgc ttgatgaaca tccgggtaac
     1261 aaacaaatcg ccgaagcaat tcgaaattcc gcgacttctt tttttgagta cgatgtgtgg
     1321 gacaccgatc acggatttac aaataagcgt gtctcactga tgaataaagt tcttgcattt
     1381 cttgaccgat aacccgggat tcaggacgcg taaaaacaaa ttcaaggttg acgtttatac
     1441 atcaaccttg cacggcctca gattaagttc cgttaagcat tctctaaagc ctcgatatca
     1501 aacttcttca ttttcatgta cgcttgcatc accttcggcg ctttttcagg atcacttaaa
     1561 agccttggta ataccgttgg cacgatctgc catgaaacac cg
//
LOCUS       DASQJI010000024         6547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1537351,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000024 DASQJI010000000
VERSION     DASQJI010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6547
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537351"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..856)
                     /locus_tag="VEV83_00840"
     CDS             complement(<1..856)
                     /locus_tag="VEV83_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43681.1"
                     /translation="MKKIILIILLFTYCKIIAQNKEVKLDDLKTPNSPGFQILDISPS
                     SIERPTNPKEFALKVFNLTNNGSALPKNFAFEIAPYWFAKPQNTNLYKYLNIKYSDES
                     GTHNNIATGIYNKLNLSLASSFSDSIAGSLLANTNYISFGVRTNLITLRTKQQNQALN
                     TLFVNISKRLGQLSDDLDQKANLIDQKILFEQDSGKRKILEDSVLLLTRARAQLVSEA
                     AEKDILYKSYLEDSLPELSTPLFQLDAAYAYSEAFPNNEYADKRFNRSGLWATATLSS
                     THLALIILG"
     gene            complement(866..1270)
                     /locus_tag="VEV83_00845"
     CDS             complement(866..1270)
                     /locus_tag="VEV83_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43682.1"
                     /translation="MARENYILSNNSNDVSIEVNVSTPGIAITKVFKITPVEIEEIKR
                     SEDGTGDIEPTDIDKASTLNNTLIKITEDIDLKNVAQDLWQSCFDNLVIQYTMRGGIN
                     GAETFTCKNEEKSQSNNKRFIGCEKRIFLSIA"
     gene            complement(1383..1988)
                     /locus_tag="VEV83_00850"
     CDS             complement(1383..1988)
                     /locus_tag="VEV83_00850"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HYK43683.1"
                     /translation="MSYQLLKEDVLFYQRFLKSAGFYNDELDGDWGPNTNKADADFLS
                     TGASIAEQLGKFDARSEGNIITLLPKAQIEARKFLQLCKNAGKDVRIISGTRTYNEQN
                     TIYAQGRTTPGPVVSHARGGQSNHNFGIAWDIGIFNNGSYSTNDEEYISLAETILPNI
                     TTLEWGGNWHSIKDNPHYQLKAVSNDVGDIRLLFENGQVYV"
     gene            2478..2885
                     /locus_tag="VEV83_00855"
     CDS             2478..2885
                     /locus_tag="VEV83_00855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43684.1"
                     /translation="MKFLLRASSTILIIFLLIGCADKYPAASTALEAGREFIDGCLKG
                     DFEKASAYMINDNENKSELLKIKRDYDSKSKEQKTSFATASIIITEDATINDTMHVIN
                     YKNSYDQFARKVKVVKRDGAWKVDFKYTFNGNL"
     gene            2891..3265
                     /gene="crcB"
                     /locus_tag="VEV83_00860"
     CDS             2891..3265
                     /gene="crcB"
                     /locus_tag="VEV83_00860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HYK43685.1"
                     /translation="MKTIIIVFTGSGIGGVARFAVQSWIAGIDQFVFPLGTFIVNIAG
                     CFLIGLFYALGERGSLLTPEWRIALTTGFCGGFTTFSTFAFENMNLLRTGDYLYLALY
                     ISFSILLGIAGVFLGIATMKFI"
     gene            3272..3619
                     /locus_tag="VEV83_00865"
     CDS             3272..3619
                     /locus_tag="VEV83_00865"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HYK43686.1"
                     /translation="MELSGTSILLRVFTGEADHIGHMPVYECIIKAAREKNIAGATVL
                     RGIMGFGASSVIHTARLIEISGDLPIVVEIVDTENKIEEFIPVIQQIFEQSKKGGLIT
                     TEKVNVLFYHPDK"
     gene            3635..4183
                     /locus_tag="VEV83_00870"
     CDS             3635..4183
                     /locus_tag="VEV83_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HYK43687.1"
                     /translation="MITVLHPWHGVSYGEKAPRIVNAVIEIPQGSRCKYEIDKESGLL
                     KLDRVIYSSFHYPINYGFIPQTYGDDKDPLDILVLTSLPVQPLTLMEAKVIGVMQMID
                     SGDADDKLISVANHDPAVNHYNNIEELPKHFFEELRHFFEEYKRLEKKTVIVEEFGDK
                     ATALEIISDGINLYKEMFRKNA"
     gene            4300..4452
                     /locus_tag="VEV83_00875"
     CDS             4300..4452
                     /locus_tag="VEV83_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43688.1"
                     /translation="MATRKSSSNYWIRFLLWIGVLILLIVFYPQLLWMALPGIVTNFA
                     LALNIM"
     gene            4522..4761
                     /locus_tag="VEV83_00880"
     CDS             4522..4761
                     /locus_tag="VEV83_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43689.1"
                     /translation="MGHIIENDSKALQKLNINLPLQSGPNHLHGSPVYFEIKMGRNTS
                     MRGVRDGSSSNFQNNSQKATGIVWASHPTAATHWM"
     gene            4722..5090
                     /locus_tag="VEV83_00885"
     CDS             4722..5090
                     /locus_tag="VEV83_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43690.1"
                     /translation="MGIAPYSGNSLDVIVPGIVQAFDANDVQHELWNSNINATGDSIG
                     RFAKFVCPTMANGNVYMATFSNQLAVYGLLANPQTRSGNFAITAYPNAAANRLYIKCV
                     SNTSNDKISLRMVSSLGYTV"
     gene            5434..5904
                     /locus_tag="VEV83_00890"
     CDS             5434..5904
                     /locus_tag="VEV83_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43691.1"
                     /translation="MRNHIFVHVNGKTYMQRLKPTLVGPLLFVFFVISIGYLGTESVW
                     TILAGLLLLGFYLIEKLRWGRIYITDIRELPDEKLKITYLDKDEVKEYVGEKKSLHLQ
                     RNAVWYTTHADKEQYIVIKDEQKGFSLKQYALGDWENEMIDKLVKDWEPQGSLV"
     gene            complement(6026..>6547)
                     /locus_tag="VEV83_00895"
     CDS             complement(6026..>6547)
                     /locus_tag="VEV83_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HYK43692.1"
                     /translation="ARLEKDYDILYLGTNGTCAHEFIVDLRPFKKTAEIEAEDVAKRL
                     IDYGFHAPTMSFPVPGTIMIEPTESEDKGELDRFCEALLTIRDEVRSIEDGHSDKKDN
                     ALKNSPHTQAVVCADEWNHNYSRKEAAFPLHYVALNKFWPSVARVNNTYGDRNLVCTC
                     EPVSAYVGETVDE"
BASE COUNT         1795 a         1358 c         1411 g         1983 t
ORIGIN      
        1 tgcctaaaat aattaaggcc agatgagtgg atgatagggt tgcagttgcc cataagccgc
       61 ttctgttaaa tcgcttgtcg gcatactcgt tattagggaa tgcttccgag taagcgtatg
      121 ctgcgtcgag ctgaaaaagt ggcgtgctca gttcgggtaa gctgtcttcc agatatgatt
      181 tataaagaat atctttttcc gcagcctctg aaactaattg agcacgtgct cttgtaagca
      241 ggagtacact atcttctaga atttttcttt ttcccgaatc ctgttcaaaa agaatctttt
      301 ggtcaataag gtttgctttt tgatccaggt cgtcagacaa ttgtcctaat cgttttgata
      361 tgttcacgaa cagcgtatta agagcctggt tttgttgttt tgtccttagg gttattaaat
      421 tcgttctcac tccgaaagaa atgtagttcg tatttgcaag caggctgcct gcaatggaat
      481 cactgaatga agaagcaagg gaaaggttta atttattata gatgcctgtt gcaatattgt
      541 tgtgtgtgcc cgattcgtct gaatatttta tgttgagata tttgtaaaga tttgtattct
      601 gtggttttgc aaaccagtag ggagcaattt caaaggcaaa atttttgggt aaggcactgc
      661 cgttattggt caaattaaac acctttagag caaattcttt agggtttgtt ggtctttcaa
      721 tgctggacgg tgagatatcc aagatttgaa atcccggtga atttggagtt tttaaatcat
      781 ccagcttaac ttctttattc tgggcaatta ttttacagta ggtaaagagg agaataatta
      841 gtattatctt tttcatagaa cgagtttacg cgattgataa aaagatcctt ttctcacaac
      901 caataaagcg cttattatta ctttggcttt tttcctcgtt cttgcaggta aatgtttcgg
      961 caccgttaat accgccccgc atggtgtatt gaattactaa attgtcgaaa catgattgcc
     1021 ataaatcttg agcaacattt tttaagtcga tgtcctcggt gattttaata agagtgttat
     1081 ttaaagtgct ggctttgtcg atatcggttg gttcaatatc cccggtgcca tcctccgacc
     1141 ttttgatttc ttcaatttcg actggcgtta ttttgaaaac tttcgtgatt gctatacctg
     1201 gtgtagacac atttacttca atcgaaacgt cgttgctatt gttgctgaga atataatttt
     1261 ctcttgccat gattttagat ttttcgccta ttctattccc ttttcggctt ccgggtactt
     1321 actctgttat caggctgctg tgggggttaa ggattttcag cgttcttcct tgatgaatac
     1381 tcctacacgt atacctgccc attttcaaat aaaagacgta tgtcacccac gtcattactt
     1441 acagctttta actggtagtg tggattgtct ttgatggagt gccagttgcc tccccactcc
     1501 agtgtagtta tattaggtaa tatggtttcg gcgagagaaa tgtactcttc gtcattggtg
     1561 ctatagcttc cattgttaaa aattccaatg tcccacgcaa taccaaagtt gtggttgctt
     1621 tggccacctc ttgcatggct aacaacaggt ccgggtgttg ttctgccttg tgcgtatatg
     1681 gtattttgct cattgtaggt acgtgtgccg gagatgatgc gcacatcctt ccctgcattt
     1741 ttgcacagct gtaaaaactt tcgggcctca atctgtgcct taggtaataa ggttattata
     1801 tttccttcac tgcgtgcatc aaattttccg agctgctccg cgatggaagc acccgttgac
     1861 aaaaaatcgg catctgcctt atttgtgttg ggcccccaat cgccatctaa ttcgtcgtta
     1921 tagaagcccg cagatttcaa aaatctttgg tagaagagta cgtcttcttt taataattgg
     1981 taactcatat taatttattt tggtttgtat tgaaatcgcc ttgctggttt tgaacttaac
     2041 gaatgcattt cttctgttta agcttgctgt tcaggaaact tgaaaccaag ataggtcgtg
     2101 gcagttagac cctgcaaagc cagtaatgtt gcaccgaaaa cgggcattga caaatttttc
     2161 caaactgagt aaaggaagat taggcctaat acgaaagtcc atacaaacat ctgcagacga
     2221 tgaaaggtta cacacgtgct ccgcgccctt caacggggaa atccccggcg cacacatgta
     2281 ttttccttgt ttacaaaatc ttaatgctga cggattactc gaagcgagct ttgcaatggg
     2341 taacggaaag tagtcttagt tttgatctat tgtttcgcag gtctgcttag gtctatttcc
     2401 agtgataata ttacctactg tttttcgaaa atccaagtgt ttgtcaaaaa aattttcttt
     2461 tgagtaattt tgaaggaatg aaatttcttc ttcgtgcgtc ttcaacgatc cttataattt
     2521 ttttgctcat cggctgtgcg gataaatatc ccgccgcatc cactgcactg gaagcaggac
     2581 gtgaatttat tgacggctgc ctgaaaggtg atttcgaaaa agcatctgct tacatgatca
     2641 acgataacga aaataaaagc gaactgctga aaataaaacg agattatgat tccaagagca
     2701 aagaacagaa gacgtcgttt gccacggcat caatcattat caccgaagac gcgactataa
     2761 acgataccat gcatgtcatt aactacaaga attcgtacga tcagtttgcg cgtaaagtga
     2821 aagtggttaa aagagacggt gcatggaaag ttgattttaa atacacgttt aacggcaatc
     2881 tttgatccac atgaaaacaa taatcatagt ttttacagga agcgggatag gaggagttgc
     2941 caggtttgcc gtacaaagct ggatcgcggg aattgatcaa tttgtatttc cgctgggtac
     3001 ctttattgtg aatattgcgg gttgtttttt gatcggttta ttttatgcac tcggagaacg
     3061 gggaagctta cttacgcctg aatggaggat cgctctcacc acaggttttt gcggaggctt
     3121 caccaccttc agcacatttg cattcgagaa tatgaacttg cttcgaacag gcgattatct
     3181 ataccttgcc ttatatattt ctttcagtat actgctcggc attgcgggag tttttcttgg
     3241 tatcgccaca atgaaattta tttaatcgtc tatggagcta agcggaacat ccatattgct
     3301 gcgagtgttt accggcgaag cggatcacat tggccacatg cctgtatacg aatgcatcat
     3361 caaagcagca cgcgaaaaaa atattgccgg tgctacggta ttgcgcggaa ttatgggctt
     3421 cggagcgagc agtgtaattc ataccgcaag gcttatcgaa atttcgggtg atctgccgat
     3481 cgtggtagag atcgtagaca cggaaaacaa aatcgaagaa tttattccgg tgattcaaca
     3541 aatttttgaa caaagcaaga aaggcggtct tataacgact gaaaaagtaa atgttctttt
     3601 ttatcatccg gataaataaa atcaaaacag tcacatgatc acagttcttc atccatggca
     3661 cggggtgagt tacggagaaa aagctccgcg catcgtcaac gcagtgattg aaattcccca
     3721 gggctccagg tgcaaatatg aaattgacaa ggagagcggc cttctcaaac tcgaccgggt
     3781 gatctattcc tcatttcatt acccgataaa ttatggcttc attccgcaga cttacggcga
     3841 cgataaagac ccgcttgata tccttgtgct aacttctttg ccggttcagc ctcttaccct
     3901 aatggaagca aaagttatcg gcgttatgca gatgatcgac agcggcgacg cggatgataa
     3961 actgatatcc gtcgccaacc acgacccggc tgtgaatcat tacaataaca ttgaagaatt
     4021 gccaaaacat ttttttgaag agctgcgcca ttttttcgaa gaatacaaac gcctcgaaaa
     4081 aaagacggtg attgtggaag aatttggtga caaagcaaca gcgctcgaaa taatttcgga
     4141 tgggattaac ctgtacaagg aaatgttcag gaaaaacgca tgagcatttg cagaattatt
     4201 ttgttgcagg tgttgacgtg ctcgctataa aaattgtttt tattgacaaa taatttttcg
     4261 gcagtttgta tgaacactat ttttgcaaaa acaactcgca tggcaacgcg caagtcatct
     4321 tcaaactact ggattcgttt tttactttgg atcggagttt tgatcctgct gatcgttttt
     4381 tatccccagc ttttgtggat ggcgcttccg ggcattgtta cgaattttgc gttggcgctt
     4441 aacattatgt aacctatatc tttgttgcct tcgaacttat taaaacgctg aggatattcg
     4501 cacctgatca ataacgatga tatgggccat atcatcgaaa atgattcgaa ggcgctgcaa
     4561 aaactgaata tcaatctacc gctgcaatca ggacccaacc acctgcacgg cagccccgtg
     4621 tacttcgaaa tcaaaatggg caggaataca tctatgcgtg gggtgaggga cggctcctca
     4681 agcaatttcc aaaataattc tcaaaaagcc accggtattg tatgggcatc gcaccctaca
     4741 gcggcaactc attggatgtg atagtgcctg gtatcgtaca ggcatttgac gcgaatgacg
     4801 tacaacatga attatggaac agcaacatca acgcaaccgg ggattccatc ggccgatttg
     4861 caaagtttgt gtgccccacc atggcaaacg gaaacgtcta tatggcaacg ttttctaatc
     4921 agcttgcggt ttacggcctg ttagccaatc cgcaaacgcg ttccggcaac tttgcaataa
     4981 ctgcctatcc aaatgctgca gcaaatcgtc tatacataaa gtgtgtgagc aatacgtcta
     5041 atgacaagat ctcgttgagg atggttagct ctttgggtta cacggtttga atttcaccgc
     5101 cacgttggtc gaagatctgc cgcacaacat aagaagcggt ttctacatac tgatcgccac
     5161 aaattcggaa ggcgaatcca gaaacagtaa ggttatcatt cagcggtgag acgtgcaaat
     5221 gcagattcgc gctgaacaca acttatccac ccaccgaaaa aattcatttt tggacagtta
     5281 atttttgtac cttttcactt caatttcagc atatcgaagt gaattctatt tgaaaaattt
     5341 attggaagca ttaagctttg tttagagctt gatgtagcga atgtggatga aacggtaaca
     5401 acacttctat tgtaaacgtt caaaattctc cttatgcgca accacatttt cgtacatgta
     5461 aacggaaaaa cgtacatgca gcgcttaaag cctacgctcg tgggccctct tctgtttgtc
     5521 ttctttgtaa ttagtatcgg ctatttggga acagaatctg tctggacaat cctggccggt
     5581 ctgctgctcc tcggttttta tctcatcgaa aaattgagat ggggacggat ctacatcact
     5641 gacattcggg aacttcccga tgaaaaactg aagatcactt atctcgacaa ggatgaagtg
     5701 aaggaatatg tcggtgaaaa aaaatcgctg catcttcaac gcaacgccgt ctggtatact
     5761 acccacgccg acaaagagca gtacatcgtc atcaaagatg agcaaaaggg atttagcctg
     5821 aagcaatatg cgcttggcga ttgggaaaac gaaatgatcg acaagctggt taaagattgg
     5881 gaaccgcagg gcagcctggt gtaggtattt gtgtcttcaa ccaaacatta agcacaaacc
     5941 gatatcgagg tcgcggcatt atgcgctgca aacctttggc cggctttatt gccgcatttc
     6001 tcagcgaaaa attaacgggt tctttttact catccacagt ttcaccaacg tatgcactca
     6061 ccggttcgca agtgcataca aggttacgat caccgtaagt attatttact cttgctaccg
     6121 aaggccagaa tttattgagg gctacatagt gcagcgggaa tgccgcttcc tttcttgaat
     6181 aattatgatt ccattcatct gcgcacacga cggcttgtgt atgcggggaa ttttttaacg
     6241 cgttgtcttt cttgtctgaa tgcccgtctt caatacttct gacctcatcg cggatcgtta
     6301 acaatgcttc gcaaaatcga tcaagctcac ccttatcctc gctctcggtt ggctcgatca
     6361 tgatagtgcc gggaaccggg aagctcattg tcggagcatg aaagccataa tcgatcagtc
     6421 gcttcgctac atcttcagct tcgatctctg cggttttctt aaatggccgc agatcaacta
     6481 taaattcatg cgcacatgtt ccatttgttc cgagatacaa gatgtcataa tctttctcga
     6541 gtcttgc
//
LOCUS       DASQJI010000025        11715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_155243,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000025 DASQJI010000000
VERSION     DASQJI010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11715
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155243"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1146)
                     /locus_tag="VEV83_00900"
     CDS             complement(<1..1146)
                     /locus_tag="VEV83_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HYK43693.1"
                     /translation="MSVRYKEFSRLDLPAIEKEILRKWKEDHAFEKSVSIRDGAPDFV
                     FYEGPPSANGMPGIHHVISRTLKDLVCRYKTMRGYQVKRKGGWDTHGLPIELGVEKEL
                     GITKEDIGKKISVEEYNKKCREAVLRYKDKWDELTERIGYWVDLEHPYITFQNEYIET
                     LWWLLKQLYERGLLYEDVSIQPYSPAAGTGLSSHELNQPGTYKDVKDTSCVAMFALTL
                     KGTKEPHRFAKKLLESAQEAWHDFVLPAGGAEVFFLAWTTTPWTLPSNLGLTVGGNIE
                     YVLVKTFNPYTHLPVNLILAKALVGRYFKAEGENAAFENYSPDAKILPWRIIAEFRGK
                     DLEGISYEQLLPFEANKTDNPNAFNVLLGDFVTTEDGTGIVHTAPAFG"
     gene            complement(1308..1922)
                     /locus_tag="VEV83_00905"
     CDS             complement(1308..1922)
                     /locus_tag="VEV83_00905"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK43694.1"
                     /translation="MKKRTIVLAALCITCFSLYRCNTPSPNSTAGADSASSGNDMYHG
                     YASQSEWGKHLVTVGACGDCHTPKKLGARGPEDDSSLLLSGHPAQMPVASISKEELAK
                     GVAATTDLTGWVGPWGTSYAANITPDSTGIGAWSEQQFITCIRQGLFKGLPGSRPIMP
                     PMPVNSFRNFSDDELKAIFAYLKTVQPVHNVVPDYQPPAGAPKQ"
     gene            complement(2053..2925)
                     /locus_tag="VEV83_00910"
     CDS             complement(2053..2925)
                     /locus_tag="VEV83_00910"
                     /inference="COORDINATES: protein motif:HMM:NF015818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HYK43695.1"
                     /translation="MEQLTQHISEALSNHFNQHVEIKHHSQVFGGDINQNFQLQTNIG
                     RFFLKVNHHRYADMFAKEFAGLKLLYDTHSIRVPQPIFHGRFREHIFLLQEFIEKGNA
                     RQNFWETFANKLAALHRNSNDRFGSEDDNYIGSLEQRNTFCDTWPEFYRTQRIMPLMQ
                     RAFDAKKVSKQELARAEKLCDRFEHFFPPETPSLIDGDLWSGNYLSDESGDPVIFDPA
                     VYYGNREMDIAMSMLFGGFEQSFFDQYNDAFPLESNWRERIHLCQLYPLLVHLILFGG
                     HYYSSVMNVITAYA"
     gene            complement(2980..4791)
                     /gene="typA"
                     /locus_tag="VEV83_00915"
     CDS             complement(2980..4791)
                     /gene="typA"
                     /locus_tag="VEV83_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HYK43696.1"
                     /translation="MDIRNIAIIAHVDHGKTTLVDKILHATKVFRDNQETGDLIMDSN
                     DLERERGITIFSKNAAVVYKGVKINVIDTPGHSDFGGEVERVLKMADGVLLLVDAFEG
                     PMPQTRFVLQKALQLNLHPIVVINKVDKPNCRPDEVHDAIFELFFNLDATEEQLDFPT
                     FYGSGKHGWFNDSLTQSEDITPLLDGILKYVPEPKVAEGPLQMQITSLDYSSFLGRIA
                     IGKVSRGEIKENQQIALVQTDNNIKKLRVKELYVFEGMGKKKVAEVKAGDLCAVVGLE
                     DFNIGDTIADIENPEALPVISVDEPTMSMLFSINNSPFYGRDGKFVTSRHLRDRLMKE
                     TEKNLALRVEDTGGADSFLVYGRGILHLGILVETMRREGYELTVGQPKVIVREINGKK
                     CEPFEILVVDVPQEFASKVIDLVTRRKGELHVMETKGEMQHLEFEIPSRGLIGLRSNM
                     LTNTAGEAVMSHRFIEYRPWKGNIPGRNNGVLLSKNQEKTTAYSIDKLQDRGTFFVEP
                     GEEVYTGQIIAEHIKPGDLVVNATELKKLTNHRASGSDDASRIAPKTLLTLEECMEYI
                     QFDECIEVTPNHIRMRKVILDEEERKRQQKRLQAEEV"
     gene            complement(5035..5214)
                     /locus_tag="VEV83_00920"
     CDS             complement(5035..5214)
                     /locus_tag="VEV83_00920"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HYK43697.1"
                     /translation="MANTTSTRGRSQDRKKVAGGQDYEVNYEAKKTNTSSKEVRNAVK
                     SAGNSRSKVERKLKK"
     gene            complement(5257..6954)
                     /gene="ggt"
                     /locus_tag="VEV83_00925"
     CDS             complement(5257..6954)
                     /gene="ggt"
                     /locus_tag="VEV83_00925"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HYK43698.1"
                     /translation="MKHATIFLLLIFIATKLFSQDRLTGKSFSTRSEVIAQHGMACTS
                     HPLATMVAIDILKKGGSAIDAAIGANAVLGVVEPEMNGIGGDLFAIVYDAKTRKLYGL
                     NASGRSPYSLTLDEFKKQGLTSIPVYGPLSVSVPGCVDGWFELNKKFGKISMQQILQP
                     AIDYAKNGFPLADEAAYYFNSLQQTYSSSPGFAQQYYPNGVVPQRGDIFKNPQLANTL
                     EKIADGGRDAFYKGDIAKTIDAFMKKNGGFLSYKDLADHTSTWVDPVSTTYRGYRVWE
                     LPPNGQGIAVLQMLNILEGFDFSKIAWGSAEHIHLFVEAKKLAYEDRAKYYADPEFAK
                     IPVDKLISKEYAAQRRKLIKPEHASDDFEAGDVALKNGETVYLTVADSAGNMISLIQS
                     NFSAFGSGMVPDGLGFVLQNRGRLFTLEEGRNNSYAPHKRPFHTIIPAFVTKDDKPYM
                     SFGVMGGGFQPLGQVQVLMNMIDFGMNGQEAGDAPRIDHQGSSEPTGIKSAGVGTIYL
                     ESGFSFDTIRTLTQWGHKIASRAPGDFGGYQCIRYDAEHKVYYGASDPRKDGMAAGY"
     gene            7008..8315
                     /locus_tag="VEV83_00930"
     CDS             7008..8315
                     /locus_tag="VEV83_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43699.1"
                     /translation="MLKIKLVISCMLVVVIFQSSFFDANHFGGSTPKATLIPSKKFSF
                     NSFVDCNMAEAWIGDTFRIFPGKYGEDPLWGNARDLKFANGKNADEAFSSTKENFTEP
                     NMPVDAKPATAGLHGAVWFETIYQDKKDETGKTLYAVYHNENYPSTLPYDASTGEGYI
                     DKDWPQGLTGATTPAAVCRIGIMKSADGGRSWENKGIFIEDLQPRMILKPQNTSVTFA
                     GGVGDPSAVVSGDYLYLFYGEYGYPGTYSNEHYNMLTEWGGQCISVARISLQDLDDPV
                     GKAKRWDGKGFNADFNGVGFPIASLQIPIIDGGGPASSPTSKFHWGPSVSWNTYLHCW
                     VMLMAMAEGPSWKGGSIWISFNTNPDFGAGFNSQKWSTPQMLLNRPGHTIWYPSLQPT
                     NTASDVQERNTCLKLGQEARLFFKDTHGDTSEYLSEYKLRFEK"
     gene            complement(8421..9176)
                     /locus_tag="VEV83_00935"
     CDS             complement(8421..9176)
                     /locus_tag="VEV83_00935"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK43700.1"
                     /translation="MKILIVEDEIPALQNLKMCIAGADNSIQIAGTTRSVAETIAWLQ
                     NNPSPDLILMDIQLSDGLCFHIFREHAVQCPVIFTTAYDKYMIDAFEYNCIDYLLKPI
                     DLNKLTHTLHKYKNLQHYFVNNYSTILEYLNANKKNKSRIIVKKGTEFLSIRLDDVAY
                     FFTEHKLVFLVDKENKKYLCETNSLSDIEVMLDSKTFFRVNRKYIVNADFITKFKSIE
                     KSKISVEISLPVMEELIVSQENASVFKKWISEI"
     gene            complement(9173..10249)
                     /locus_tag="VEV83_00940"
     CDS             complement(9173..10249)
                     /locus_tag="VEV83_00940"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK43701.1"
                     /translation="MKPVATIDVLPSGGKKIFKNDTFVKIISIPILAIGVVNCTKIIT
                     NEKYSPLVLITDYIFFIALAWLVWEGNVRLMIYLKKNFPVSFAAYYKSILTLYAIVIT
                     YTAFVAFSGLGLWLAFSSEDTGSLNRLFSTVAVIVVLAMFVASVYEIFYLSEEQADTV
                     KRAKQLDIAKTHAELVALKNQIDPHFIFNSLNTLSYLISTDPLNARLYNDTLAKVYHY
                     ILFNREKNLVLVREEIEFLSNFFYLLKIRFGNAIDMLIEIDSLQAEELCVPPISLQIL
                     LENAIKHNELSEHNPLTIHISVSPNFIVVRNRIIKKTYQQPTAGTGLNNLDNRYKLLT
                     AKNIIVYKTADDFIVKLPVLNSKK"
     gene            10566..11663
                     /locus_tag="VEV83_00945"
     CDS             10566..11663
                     /locus_tag="VEV83_00945"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK43702.1"
                     /translation="MSIHPFVFSNSKQYRIARHALFWIVWILYYSVMSALLMTKKYGF
                     TLSFFEALTEVAESTPLDMCFCYFIIYFLLPEFLYKGRYIGMLFLWLAASIFFIVLYE
                     LNAMFVVPYIRGWYGLKVTVSTPSNYVWDFFTLFSQINMEGCVAAAIKLGKLWYIKQQ
                     EIDLLKEEKQNIQPHEQQGLVHPAFLTDLLTRMESIANENPIVAAQSMKKIRHLLLYI
                     LYENSSAQVSLRKELSLLQEYIDLEKLTNEKEIEMRTVIDAVPDHQTIAPFIILPLVE
                     NAFKQVSLFSLDKSKVNLNIQLQQDVLHVALSWSKPVDTSSLTNGRNVILHNISRRLR
                     LIYPQSHELKMMIETEKILVKLSLNLRKAIN"
BASE COUNT         3125 a         2657 c         2561 g         3372 t
ORIGIN      
        1 accgaatgcc ggcgcggtat gaacgatgcc cgttccgtct tcggtggtta caaaatcacc
       61 gagaagaacg ttgaatgcat tcgggttgtc tgttttgttg gcttcaaacg gaagcaattg
      121 ctcatacgaa attccttcca ggtcttttcc cctaaattct gcaatgatcc tccacggaag
      181 aattttcgcg tctggagaat aattttcaaa cgcggcattc tctccctccg ctttaaaata
      241 cctcccgacc aaagcctttg cgagaattaa gtttacgggc aaatgtgtat aaggattgaa
      301 ggtttttaca agcacgtact cgatgtttcc accaactgtc agcccgagat tagacggaag
      361 cgtccacggc gtggtcgtcc atgcaagaaa aaatacctct gcgcccccgg ccgggagtac
      421 gaaatcatgc cacgcctcct gcgcgctttc taaaagtttc ttcgcaaaac gatgaggttc
      481 ttttgtcccc ttcagggtta gggcaaacat ggccacgcag cttgtatcct ttacatcttt
      541 atatgtgccg ggctgattca gttcatgcga actcaagcct gtaccagccg cgggcgaata
      601 gggttggata ctcacatctt catataacaa accacgttcg tataattgtt tcagcagcca
      661 ccaaagtgtc tcgatgtact cattctggaa tgtaatgtaa ggatgttcca ggtcgaccca
      721 atagcctatc ctttcggtta gttcatccca cttatccttg tagcgaagca ccgcttcacg
      781 gcatttctta ttatattctt caaccgagat ctttttgccg atatcttctt tggttatacc
      841 aagctctttc tctactccca actctatagg taatccatgc gtatcccacc cgcccttgcg
      901 tttcacctgg tagccgcgca tcgtcttata acgacaaacg agatctttga gcgtgcgtga
      961 aatcacatga tgaataccgg gcatgccatt agcgctcggc ggcccttcgt aaaaaacgaa
     1021 atcaggcgct ccgtccctga tgctgacact tttttcaaac gcatgatcct ctttccactt
     1081 tcgcaaaatt tctttttcga tcgcaggcag atctaaacgc gaaaattctt tgtatcgcac
     1141 actcataacc accgaatgct tctatttctt taaaaaggct gcgaagttag gaagatactg
     1201 tcaaagatct tctcaaaaaa ggaggtgcgc gaacagtggc tgaatggcac ccaacaaaaa
     1261 aagccgggca acaacacccg gctatactca ttcagttttg catgcattta ttgttttggc
     1321 gcaccggccg gtggctgata gtcgggcaca acgttatgaa caggttgcac tgttttgaga
     1381 tatgcgaaaa tcgccttcaa ctcgtcgtct gaaaaattcc tgaagctgtt taccggcatc
     1441 ggcggcataa tgggacgaga gcctggcaat cctttaaaaa gtccctgcct gatgcaggta
     1501 atgaattgtt gctctgacca cgctccaatt cctgttgaat caggcgttat gttcgcagca
     1561 tatgaagttc cccacggccc gacccaaccc gtaaggtcag ttgtggcggc gacgcctttt
     1621 gccaactcct ctttactgat tgaagcaaca ggcatttgcg caggatgtcc tgataacaac
     1681 aggcttgaat catcttcagg cccgcgtgct cccaatttct ttggagtgtg acagtcaccg
     1741 caagctccta cggtaaccag gtgtttgccc cattccgact ggctggcata gccgtgatac
     1801 atgtcgttac cggaagacgc ggaatccgca ccggcggtgg aatttggaga cggcgtgtta
     1861 caccgataaa gtgagaaaca ggtgatgcac agggcagcga gcacaatggt tcgttttttc
     1921 atgtgttaac tttttagttt tgttttcagt tgaagtttgg gggcagcggg tattttgtcg
     1981 ctgcgaaata aaataatttt tttgaaatac gttttgcgtg cgacggctcg tttgaatttt
     2041 tttcgcaact tgtcaggcgt aggcggttat cacattcatg acgctgctgt agtaatggcc
     2101 gccaaataaa atgaggtgaa caagcagcgg atataattgg caaagatgta ttctctcacg
     2161 ccagtttgat tcaagtggaa aagcatcgtt atattgatca aaaaaactct gttcgaatcc
     2221 accgaacagc atactcatgg caatatccat ttcccggtta ccatagtaaa cagcaggatc
     2281 gaaaattacc gggtcgcccg actcatcgct caagtagtta ccgctccaaa gatcgccgtc
     2341 aattagcgac ggcgtttccg gcggaaaaaa atgttcaaat cgatcacata atttttctgc
     2401 acgtgccagc tcttgtttgc tgactttctt tgcgtcaaat gcccgttgca tcaaaggcat
     2461 gatgcgttgc gtgcgataaa actccggcca tgtatcgcaa aatgtatttc gttgttccag
     2521 agaaccgatg taattgtcat cttctgatcc gaatcgatca ttgctgtttc gatgcaaagc
     2581 ggccaacttg ttagcgaacg tttcccagaa attttggcgg gcgttcccct tctcaataaa
     2641 ttcttgtagc aggaagatat gctcacgaaa tcgtccgtga aagattggct gcggaacccg
     2701 gatcgagtgt gtatcataca acaattttaa tcccgcaaat tcttttgcga acatgtcggc
     2761 ataacgatga tggttcactt tgagaaagaa gcggccgatg ttggtttgta gttgaaagtt
     2821 ttgattgatg tcaccgccga acacctggct gtgatgtttt atttctacat gttgattgaa
     2881 atgatttgaa agtgcttcgc tgatgtgttg agtaagttgc tccatcaatt gcgaaaataa
     2941 gcgtgtgacg catcaaagcg tctgacagat aaatcacacc tagacttcct ccgcctgcaa
     3001 tcttttttgc tggcgctttc tctcttcttc gtccaggata actttacgca tgcgaatgtg
     3061 gtttggtgtt acttcgatgc attcatcaaa ctggatatat tccatacatt cttccagcgt
     3121 caataatgtt ttgggcgcga tgcgggaagc atcgtcactg ccgctggcgc ggtgattggt
     3181 caattttttc aactccgtcg cattcacaac gaggtcgcca ggttttatat gctcggcaat
     3241 gatctgccct gtatatactt cttcaccggg ctcaacaaaa aaagttccgc ggtcctgtaa
     3301 tttatcgatt gagtaggcag ttgttttttc ctggtttttt gaaagcaaca cgccattgtt
     3361 cctgccggga atattcccct tccacggcct gtattcaata aacctgtggg acatcactgc
     3421 ctcgcctgcc gtattagtaa gcatgttgga acgcagcccg atcagccctc ttgaaggaat
     3481 ttcaaattca aggtgttgca tttcgccttt tgtttccatc acatgcaatt cacccttgcg
     3541 ccgggtaacc aggtcgatca ccttgctcgc gaattcctgt ggtacatcca caactaatat
     3601 ttcaaaaggc tcacactttt tgccgttgat ttctctcact atcactttcg gttggccaac
     3661 ggtcagctca tatccttcgc gacgcattgt ttcaaccagg atcccgagat gtaaaattcc
     3721 ccgtccatat actaaaaagc tgtccgcgcc tcccgtatcc tccactctta aagcaagatt
     3781 tttttcagtt tctttcatca aacgatcacg caagtgccgt gaagtcacaa actttccatc
     3841 ccgtccataa aacggtgagt tattgatgct gaacagcata ctcatcgtgg gttcatccac
     3901 acttatcacc ggcaatgctt ccgggttttc aatgtcggcg atcgtatcac cgatattgaa
     3961 atcttcaagt ccaaccactg cacatagatc gccggccttc acttcggcca ctttcttctt
     4021 acccatcccc tcaaaaacat acaactcctt tacgcgtaat ttttttatgt tgttgtcagt
     4081 ttgtacgagc gcgatctgct gattctcttt tatttccccg cgactaactt taccgatcgc
     4141 gatcctcccc aggaaagaag aataatcgag cgaagtgatc tgcatctgta atggtccttc
     4201 ggccacttta ggctcaggaa cgtattttaa aattccatcg agtaaaggtg taatatcttc
     4261 tgactgcgtc agcgaatcgt tgaaccaacc atgtttgccg ctgccataaa aagttggaaa
     4321 gtccaattgt tcttctgttg catcaagatt gaaaaacagt tcgaagatgg catcatgcac
     4381 ttcgtccggt cggcagttcg gtttgtccac tttatttatt acaacgatgg gatgcagatt
     4441 taactgcaat gctttctgca aaacaaatct cgtttgaggc atcgggcctt caaacgcatc
     4501 gactaataat aacacaccgt cagccatttt taaaacgcgt tctacttcac ctccgaaatc
     4561 tgagtgacca ggagtgtcaa tcacatttat cttaacgcct ttgtacacga ccgcggcgtt
     4621 tttcgaaaat atggtaatac cgcgctcacg ctccaggtca ttgctgtcca tgatcagatc
     4681 gcccgtctcc tggttatcgc gaaatacttt ggttgcgtga aggatcttgt ccaccagcgt
     4741 agtcttccca tggtcgacat gcgcaatgat ggctatattt ctaatgtcca tataagtaag
     4801 aagtaaaaat tagaaagtca gctagacgaa atcacttttg cgttcctggc tttttaattt
     4861 tgagttaagc cggcaaaagt acgcaataac ggcggggtgc gcaagagatg aaagtgaaga
     4921 ttatgttatg tgcggaatga aagcatcaaa aatgatatgc tggacacgca gtataaaaat
     4981 aaaaaagcct ctcgtttcat agggaggctt tttttccaat caaatgttcc tctgctattt
     5041 tttcaatttc ctctctactt tgcttcgtga attacctgcc gacttaactg cgttccgtac
     5101 ttccttactg ctagtatttg ttttcttagc ttcatagttc acttcataat cctgtccacc
     5161 agctactttt ttacgatcct ggcttcggcc acgggttgat gttgtgtttg ccatgattaa
     5221 aatttatact atcagtacat aaaaatgcgt gccaaattaa tagcccgcag ccattccatc
     5281 ttttcttggg tcagatgctc cgtagtaaac tttatgttca gcatcataac gaatgcattg
     5341 gtaacctcca aaatcacccg gggcacgaga cgcgatttta tgtccccact gcgttaacgt
     5401 tcttatcgtg tcgaaagaaa agccggactc gaggtaaatc gtaccaacgc ccgcactctt
     5461 aatgcccgtt ggctcagaag aaccctggtg atcaatacga ggtgcatcac ctgcctcctg
     5521 tccattcatg ccaaaatcga tcatattcat tagcacctgc acttgtccga gtggctgaaa
     5581 gccgccgccc attacaccga agctcatgta tggtttatca tcttttgtaa caaaagcagg
     5641 gatgatcgta tgaaacggcc ttttgtgtgg agcgtagctg ttgttcctgc cttcttcaag
     5701 tgtaaataac cttccacgat tttgcagaac aaatcccaaa ccgtcgggca ccatgccgga
     5761 gccaaatgca gaaaagttac tttggatgag agagatcata ttgcctgcag aatcggcgac
     5821 ggtgagatag acggtctcgc catttttcaa cgcaacatcg cctgcttcaa aatcatctga
     5881 tgcgtgttcc ggtttgatca gttttcttct ttgcgcagca tattctttcg aaatgagttt
     5941 atccaccggg atctttgcga actcaggatc cgcatagtat ttcgcgcggt cttcgtaagc
     6001 aagttttttt gcctcaacaa aaaggtggat atgctcggcg ctgccccagg ctattttgct
     6061 gaaatcgaat ccttccaaaa tattcagcat ttgtaaaaca gcgataccct ggccatttgg
     6121 cggaagttcc caaacacgat aaccgcgata cgttgttgat accgggtcga cccatgttga
     6181 cgtgtgatct gccaggtctt tgtaagaaag aaaaccgcca ttctttttca tgaatgcatc
     6241 gatggtcttt gcgatatcgc ctttgtagaa agcatcgcgg ccgccgtcag caattttttc
     6301 aagcgtatta gcaagctgcg gattcttgaa aatatcgccg cgttgtggca caacgccgtt
     6361 aggataatat tgctgagcga aaccagggct ggaagaatat gtttgctgca aactgttgaa
     6421 gtaataggct gcctcatctg ccaggggaaa tccgtttttg gcgtaatcaa tcgctggttg
     6481 aagaatctgt tgcatggaaa tctttccaaa tttcttattg agttcgaacc atccatcgac
     6541 gcacccaggt accgaaaccg acaatgggcc gtacacgggg atcgacgtga gcccctgctt
     6601 tttaaattca tccagggtga gcgagtacgg tgaccggccg gatgcattca gaccatataa
     6661 tttccttgtt ttcgcatcat acacgatcgc aaaaagatcg ccgcctattc cattcatttc
     6721 aggttctacc acgccgagta cggcattggc gccgatcgcc gcatcgatcg cagaacctcc
     6781 cttttttaaa atgtcgatgg caaccatggt cgctaacgga tgactggtac aggccattcc
     6841 gtgttgcgcg atcacttctg agcgggtaga aaaagatttt cctgtaagac ggtcttgtga
     6901 aaaaagtttc gtggcaataa aaatcaaaag aagaaaaata gtcgcatgct tcattgctgg
     6961 attgttttca tttgtgatgt tacatttgaa taactgaaag taaacggatg ctgaaaataa
     7021 agttagttat aagctgcatg ctcgtggtgg tgatttttca atcgtctttt ttcgatgcaa
     7081 atcattttgg tggatccact ccaaaagcaa cgttgatccc ttcgaaaaaa ttttctttta
     7141 actcgttcgt cgattgtaat atggctgaag catggatcgg agatacattc cggatctttc
     7201 cgggcaagta tggagaagac ccgctatggg gcaatgcgcg cgatctgaaa tttgcgaatg
     7261 gaaaaaatgc tgacgaagcg tttagcagca caaaagaaaa ttttaccgaa ccgaacatgc
     7321 ctgtcgatgc taagccggcc acggctggtc ttcacggcgc agtttggttt gaaacgattt
     7381 accaggacaa aaaagatgag accggaaaaa cattgtacgc ggtgtatcac aacgaaaatt
     7441 atccctccac tttgccgtat gatgcgtcga ccggtgaagg ttacattgat aaagattggc
     7501 cacaaggact aaccggtgca actacgcccg ctgctgtgtg ccggatagga attatgaaat
     7561 ctgctgatgg cggaagaagc tgggaaaaca agggaatttt tatcgaagac cttcagccgc
     7621 ggatgatatt gaaaccgcag aacacttcgg tcacttttgc cggcggtgtc ggagatccgt
     7681 ctgcagttgt gagtggtgat tacctgtatc tattttatgg tgaatatggt tatcccggca
     7741 cgtattcgaa tgaacactat aatatgctca ccgaatgggg cggacaatgc ataagcgtag
     7801 caagaattag cttacaagat ttagatgatc ctgttgggaa agcaaaacga tgggatggta
     7861 agggcttcaa cgcagatttt aatggcgtag gtttccccat cgcttctttg cagatcccga
     7921 taattgatgg aggtggaccc gcttcatcac ccacgtcaaa atttcattgg gggccttcgg
     7981 tgagctggaa cacgtactta cattgctggg taatgttgat ggcaatggct gaagggccat
     8041 cgtggaaagg cggcagtatc tggatatcgt tcaacacaaa tccggatttc ggcgcgggtt
     8101 tcaattcgca aaaatggagt acaccacaaa tgttgttgaa caggccaggc cacaccatct
     8161 ggtatccttc attgcagcca acgaatacag cgtctgacgt tcaagaaagg aacacatgtt
     8221 tgaaactcgg acaagaggcg cggttatttt ttaaagacac gcatggcgat acgagtgagt
     8281 atctgtcaga atataagctg aggtttgaga aatgaatgcc acggggttcc ggcacgtatg
     8341 attggttaca gttttttttc atcggcctgg tatcggtcag acgcttcaga agcgtcagac
     8401 cgtaatgctt caacacacac tcaaatctcg ctgatccatt ttttgaacac tgaagcgttc
     8461 tcctggctca caattaattc ttccatcaca ggcagcgata tttcgacact gatcttactt
     8521 ttctcgatgc ttttaaattt cgtaatgaag tcggcgttca caatatattt cctgttcacc
     8581 ctgaaaaaag ttttactatc aagcatcact tcgatatcgc tcagcgaatt tgtttcgcac
     8641 aggtattttt tattttcctt atccaccaaa aaaacaagtt tgtgttcggt gaaaaagtaa
     8701 gcaacatcat caaggcggat acttaaaaat tctgttccct tctttacgat gatccttgat
     8761 ttgttttttt tgtttgcgtt taaatattca agaatggtgg aataattatt gacgaagtag
     8821 tgctgcagat ttttgtactt gtgcagcgta tgggtaagtt tattaaggtc aataggtttt
     8881 agcaaataat ctatacagtt gtattcaaac gcatcgatca tgtatttgtc atatgcagtt
     8941 gtaaatatca cagggcattg aaccgcatgt tctctgaaaa tgtgaaagca aaggccatcc
     9001 gacaactgta tatccattaa aatcaggtca ggcgaaggat tattctgaag ccacgcgatg
     9061 gtttcggcga cgcttctagt agtgcccgcg atctgtatgc tattgtccgc accggctata
     9121 cacattttca aattttgtag agcaggtatc tcatcttcga cgatcaggat cttcattttt
     9181 tcgaatttag aacgggcaac tttacgataa agtcgtccgc ggttttatac acaataatat
     9241 tttttgccgt taataattta taacggttat cgaggttgtt taaccccgtg cctgccgttg
     9301 gttgctggta ggtttttttt atgatcctgt ttcttacaac gatgaagttg ggtgaaacag
     9361 atatatggat cgtgagcggg ttatgctcgc tgagctcatt atgcttgatc gcgttttcca
     9421 atagtatttg cagagatatc ggcggcacgc ataattcttc ggcctgcagg ctgtcgattt
     9481 cgatcagcat atcgatcgcg ttgccaaaac gaattttgag caggtaaaaa aagttgctca
     9541 gaaattcgat ctcctcccgg accagcacca ggtttttttc gcggttaaat aaaatataat
     9601 ggtacacttt ggcaagcgta tcgttataca ggcgcgcatt taaaggatca gtggaaataa
     9661 gataggatag agtatttagc gaattgaaaa tgaaatgagg atcgatctgg tttttgagcg
     9721 caaccagttc agcgtgggtc ttcgcgatgt ccagttgttt cgcgcgcttc acggtgtcgg
     9781 cctgctcttc gcttaaataa aatatctcgt aaacactcgc aacaaacatg gccagtacaa
     9841 cgatcactgc cacggtgctg aaaaggcgat ttagcgaacc tgtatcttct gatgaaaaag
     9901 cgagccacaa accaaggcct gaaaatgcaa caaaggcggt gtatgtgatc acgatcgcat
     9961 acaaggttaa gatgcttttg tagtatgctg cgaaacttac agggaaattt tttttcaggt
    10021 agatcatcaa tcgcacattg ccttcccaga cgagccacgc aagcgcaatg aaaaaaatat
    10081 agtcagtgat gagaaccagt ggactatatt tttcattggt aatgatcttc gtgcaattca
    10141 ccacgccgat tgcaaggatg ggaatgctta tgatcttgac aaatgtgtca ttcttgaaaa
    10201 ttttttttcc accagacggc aatacatcta ttgttgcaac aggcttcatg cagaacaatt
    10261 gacaacgtaa tattttcccg atcgggtaat aaaaaaagtt aataatgacc agcggagagc
    10321 cggcctttac ttgctcatca ctaaaacata gacaattaaa acgcccgaaa tcaggcttgg
    10381 gtttaaaaat ttctgccttc ggtgaatttt aggaaaatca atcaggcatt gacatctagt
    10441 ttagagcgat cagagcaaat ttttttttct cattttgaca accggagggt agtttctact
    10501 accttccctt tttttaaaac cagggctagc gcaggggaag agattcaaag ttaaggtttt
    10561 cgcacatgag catacatcct tttgtttttt caaattcgaa gcaatatcgg attgcgcgcc
    10621 atgcgctgtt ttggatcgtt tggatcttgt attattcggt catgtcagcc ttgctcatga
    10681 caaagaaata cggattcacg cttagttttt ttgaggcatt aacagaggta gctgaatcga
    10741 caccgctcga catgtgcttc tgttatttta ttatatattt cctgctgccc gagtttttat
    10801 ataaaggccg ttatatagga atgcttttct tatggcttgc tgcaagcata tttttcatcg
    10861 tattgtacga gctcaacgca atgtttgttg tgccgtacat aagaggatgg tatgggctaa
    10921 aagtcaccgt cagcacaccg tcaaattacg tttgggattt cttcacgttg tttagccaga
    10981 taaatatgga agggtgcgta gctgctgcta taaagctcgg caaactgtgg tacattaagc
    11041 aacaggaaat tgatctgctg aaagaggaaa aacaaaacat ccagccgcat gagcaacaag
    11101 gcctcgtaca cccggcgttt ctgacagacc tcctcacgcg catggaaagt atcgccaatg
    11161 aaaacccgat cgtggccgct caatcaatga aaaaaataag acacctgctc ctgtatatct
    11221 tatatgaaaa ttcttctgca caggtttctc tccgaaaaga actttcattg ctgcaggagt
    11281 atatagacct tgaaaaactt accaatgaaa aagaaataga aatgcgaacg gtgatcgacg
    11341 ctgtaccaga ccaccaaacg atcgctcctt tcatcatact gcctttggtt gaaaacgcat
    11401 ttaaacaagt gtcgcttttt tcactcgata aatcgaaggt gaacctcaac attcagcttc
    11461 agcaggatgt gcttcacgtt gcattaagct ggagtaaacc ggtcgataca tcttcattaa
    11521 ccaatggccg aaatgtgatc cttcacaata tctcgcggcg gctcaggctc atctatccgc
    11581 aaagccacga attaaaaatg atgatcgaaa cggaaaaaat cctggtgaag ttgagcttga
    11641 atctcaggaa agcgatcaat tgatgagatg agtgatgagt ggagaaagct taagtgagtt
    11701 tgaatccttt caaaa
//
LOCUS       DASQJI010000026         3720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1383814,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000026 DASQJI010000000
VERSION     DASQJI010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3720
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383814"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1328)
                     /locus_tag="VEV83_00950"
     CDS             complement(<1..1328)
                     /locus_tag="VEV83_00950"
                     /inference="COORDINATES: protein motif:HMM:NF015585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HYK43703.1"
                     /translation="MRRLLPVQVCLFVCIHVFSQQAQSFTIGDPLQSNMVIQQDKPMK
                     IWGTAPAGDIIKIKADWLNNAVIVQANQHNEWTGKIQVPAIAAGDFQPHAISITHDSD
                     WIVLTNILIGEVWLCSGQSNMDMQLKPFLPWLKGVLDFENEIAAADHPEIRLLDIQTD
                     FKAAPAERSRGTWKICTPANAADFSAVAYYFGLELLNKLHVPVGLITSAVGASGCQAW
                     TSRETLSADTALNAKYLYPFDTSAVSKETLDSVVTFEKVLRPTLLYNAMIYPLRNISL
                     RGFLWYQGESNKDDGAMYTKLCTAMIHNWRALFNQGNLPFYFVQVAPYNWLQNDSTAF
                     NYAVFREAQEAILKEKNTGMALTMDIGDPDDIHPRDKKNVGLRLALDALANTYGVKGT
                     AYIGPQFSGFSVEKDHAIISFEKKSIGAGLTTSDQQPPKHFFIAGDDKVF"
     gene            complement(1379..2590)
                     /locus_tag="VEV83_00955"
     CDS             complement(1379..2590)
                     /locus_tag="VEV83_00955"
                     /inference="COORDINATES: protein motif:HMM:NF025182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4185 domain-containing protein"
                     /protein_id="HYK43704.1"
                     /translation="MRKYGQVSALPIACCLLLFFSCTSGNHISQQPENADLASLKFTT
                     EEATDWTNLFYRKSGWFGADGIFSIAENGVDTAGAGKDAETMLFFSDTMLGEIINDSL
                     KPGYMMIHNSVAIIKGDQPKNEKIEFYWSKKTDGKPVALFTPNTPHAEEGDYYWLGDG
                     FVNKELNATYLFAYRIRDTSAAAFGFAELGNALIKIPNGSKPPFSDHKQIETPFFLGG
                     TAETYGSFGACVFPNTKDAGYKTADGYVYVYGVRGKAKNVMVARVLPKDFEQFNKWRF
                     WDGSKWNRDMNSVANITDRASNELSVTPLPDGRYAMVFQTDGIGTAVGLRLSNHPQGP
                     FGPVIKLYECQEPKIAKNIMVYNAKAHSNLSQPNELLISYNVNSFDFWNDVKIYPNLY
                     RPRFIRVKLLQ"
     gene            complement(2729..3517)
                     /locus_tag="VEV83_00960"
     CDS             complement(2729..3517)
                     /locus_tag="VEV83_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43705.1"
                     /translation="MKRIVLIISCVAIGVFFVGISCKKSADPNLAAMTLKPAMVSGKS
                     GHDTTAQLDIVAPYGVSKLLITKTVNLVPDTAFGTLSVMPESTGADTYHYMFSYTFRP
                     DEVDKLVGINFHLEDSTGHVAEKDLTVNTIASGAQIIYSHKWKLISKFWATANPPAEN
                     IQDCEKDNIYSYNADGTIPTPNYGMNPCLFDGFNIYDNWTLSDDEKVFTQTYHSVFDT
                     TKVTTEVYNVESLTSDRWVMDITLDLTAFGLSDHEKFVYTYQSE"
     gene            complement(3526..>3720)
                     /locus_tag="VEV83_00965"
     CDS             complement(3526..>3720)
                     /locus_tag="VEV83_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK43706.1"
                     /translation="MLLDSIGSAFTFWIYMTMAIFAFIFVYRLVPETKGKSLEEIEKY
                     FMHSEDEVASLNVSKTKSTF"
BASE COUNT          997 a          866 c          766 g         1091 t
ORIGIN      
        1 taaaatacct tgtcatcacc cgcaataaaa aaatgctttg gcggctgttg atccgaagtg
       61 gttagccctg caccaatact ttttttctca aaagaaataa ttgcatggtc tttttcaaca
      121 ctaaacccgg aaaattgagg gccgatatat gcagtccctt tcactccgta cgtatttgcc
      181 aacgcatcaa gtgcaagccg gagaccgaca ttttttttat cgcgtggatg aatatcatcc
      241 gggtctccga tatccatggt aagcgccatt cccgtatttt tttctttaag aatcgcttcc
      301 tgcgcttcgc gaaaaaccgc atagttgaat gcggtagaat cgttttgcaa ccaattgtaa
      361 ggtgcgactt gtacaaagta aaaaggaaga ttcccctggt tgaataaggc ccgccagtta
      421 tggatcatcg cggtgcacaa tttggtatac atcgccccgt catctttatt tgattctccc
      481 tggtaccata aaaatccacg caacgagata tttctgagcg ggtagatcat ggcattgtat
      541 agcaatgtcg gccgcagcac tttttcgaaa gtgactacgc tgtccaatgt ctcttttgaa
      601 actgcgctgg tatcaaaggg atacagatat tttgcgttga gtgcagtatc agcggacaat
      661 gtttcgcggc tggtccaggc ctggcaacct gaggcaccaa cagcgctcgt gatcagaccg
      721 acaggaacat gtagtttgtt cagtaattcc aatccaaaat aataggcaac tgcactaaaa
      781 tctgcagcgt ttgcaggtgt acaaattttc caagtgcccc ttgatctttc tgcaggggca
      841 gctttaaaat cagtttgaat atcgagcagt cgtatctccg gatgatcggc ggcggcgatc
      901 tcattttcaa aatcaagtac gcctttcagc cacggcagga acggtttaag ctgcatgtcc
      961 atgtttgatt gtccgctgca aagccacact tcaccgatca aaatgtttgt tagtacaatc
     1021 cagtcgctat cgtgggtgat gcttatggca tgcggttgaa aatctccagc tgcaattgcg
     1081 ggcacttgta tcttaccagt ccattcatta tgctgattag cctgcacgat cactgcgtta
     1141 ttcaaccagt ccgcttttat ttttattatg tcgccggctg gagcagtgcc ccatatcttc
     1201 atgggcttat cctgttgaat caccatgttg ctttgcaaag gatcaccaat ggtaaacgat
     1261 tgcgcttgct gcgagaaaac atgtatgcag acaaacaaac aaacctgtac gggtaatagt
     1321 cttctcatta ccttaattct caaattcgca tattttcaaa ttttcaactt cactttattt
     1381 attgcaacag cttcactcga ataaatctcg gccgatataa gtttggatag atctttacat
     1441 cgttccagaa atcaaaagaa tttacgttat agctgatcag taattcattt ggctgcgaaa
     1501 gatttgaatg ggctttcgcg ttatagacca taatgttttt cgcgatctta ggttcctggc
     1561 attcatataa tttaataaca ggaccgaagg ggccctgcgg atgattgctt aatcgcaaac
     1621 caaccgcagt gccaatgcca tctgtttgaa acaccatggc atatcttcca tcgggaagcg
     1681 gggtcacgct tagttcgttt gaagcacggt ctgtaatatt cgccaccgaa ttcatgtccc
     1741 gattccattt gctgccatcc caaaagcgcc atttattgaa ctgttcaaaa tcttttggaa
     1801 gcaccctcgc gaccattaca ttttttgcct tgccgcgcac gccataaaca tacacatacc
     1861 catccgcagt tttataaccg gcgtcttttg tgttcggaaa aacacacgcg ccgaatgaac
     1921 catatgtttc agcggttccg cctaaaaaaa atggcgtttc tatttgcttg tggtctgaga
     1981 acggaggttt gcttccgttt ggaattttta tcagcgcatt gcccaactcc gcaaagccga
     2041 atgcagcggc gcttgtatcg cggatacgat aagcaaaaag gtaagtggcg ttgagttctt
     2101 tgttcacaaa cccgtcgccc agccaataat aatctccttc ttctgcatgt ggtgtgtttg
     2161 gtgtgaacaa ggccaccggt ttcccgtccg tttttttact ccagtagaat tctattttct
     2221 cgttctttgg ctggtccccc tttatgatgg caaccgaatt gtgtatcatc atgtagccgg
     2281 gcttcaaact gtcgttgatg atctcgccaa gcatcgtgtc gctgaagaac aacatcgtct
     2341 ctgcatcttt accagcaccg gctgtatcaa caccgttttc ggcgatggaa aaaattccat
     2401 ctgcgccaaa ccaacccgat ttcctgtaaa acaaatttgt ccagtcggtg gcttcttctg
     2461 tcgtaaattt taaagaggcc aggtcagcat tctctggttg ctgcgagata tgattgcctg
     2521 atgtgcacga aaaaaataac aacaaacaac aggcgatcgg taatgctgag acctggccat
     2581 attttctcat cgcgtaaaaa tttctatttc gattttgatt tatttaataa cgacagtcac
     2641 tttcgtggca caatgcgact taagactgtt gaccaagaat cgcaactgtc ccccctggtt
     2701 ccttaatgca caaacgatac tgcacgcatc actccgattg atacgtgtac acaaactttt
     2761 catgatcgct taatccaaac gctgtaagat caagcgttat atccatcacc cacctgtcac
     2821 tcgttaatga ttctacatta tatacttcag ttgtaacctt tgttgtatca aacaccgaat
     2881 gatatgtttg cgtgaaaact ttttcatcat cactcagcgt ccagttgtca tagatattga
     2941 agccgtcgaa caggcacgga ttcattccat aattcggagt cggaatagtg ccatcagcat
     3001 tgtaggagta gatgttgtct ttttcgcaat cctgtatatt ttctgccgga ggatttgcgg
     3061 tcgcccaaaa cttcgagatc agtttccact tatgcgaata aatgatctgg gcacctgaag
     3121 cgatcgtgtt cacagtaaga tccttttctg caacgtgacc cgttgaatct tcaaggtgaa
     3181 agtttattcc aacaagctta tcaacttcat caggccgaaa agtataagag aacatgtaat
     3241 ggtatgtatc ggcacccgta ctctcgggca tgacactcaa cgttccaaat gcggtatcag
     3301 gaacgaggtt gaccgtcttt gtgatgagca gtttactaac gccgtaaggc gccacgatat
     3361 ccaactgagc ggttgtatca tggccggatt tgccgctaac cattgccggc ttcaaggtca
     3421 ttgcggcgag attagggtcg gcagattttt tacacgaaat accaacgaaa aatacgccga
     3481 ttgcaacaca ggatattatt aaaacaattc gtttcatata cagtattaaa aagtagattt
     3541 tgtttttgat acgttgagtg aagcgacttc atcttctgaa tgcatgaaat acttttcgat
     3601 ctcttcaagc gattttcctt ttgtctccgg cacaagcctg taaacaaaaa tgaaagcaaa
     3661 aatggccatc gtcatatata tccagaatgt gaatgcgctt ccaatagaat cgagcagcat
//
LOCUS       DASQJI010000027         2469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1383880,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000027 DASQJI010000000
VERSION     DASQJI010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383880"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1072
                     /locus_tag="VEV83_00970"
     CDS             <1..1072
                     /locus_tag="VEV83_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HYK43707.1"
                     /translation="YVLNLSNNQIEKILAPVTMLATGGLGQVYRSTTNPKIATGDGIA
                     MVYRAKGKVENMEFIQFHPTALYEPGVSPSFLITEAVRGDGGILRNKAEEAFMEHYDE
                     RKDLAPRDIVARAIDNEMKRMGTEHVYLDCRHMDTNKFIHHFPNIYEKCLSIGVDVFK
                     QMIPVAPAAHYSCGGIKTNEWACTSITNLYACGECASTGLHGANRLASNSLLEAMVFG
                     HRAYLSVVNESNDGTAAVRPWAEVQVPDWNAEGTSEPKEMILITQSLKELQQIMTDYV
                     GIVRNDVRLDRAMKRLDLLFDETEALYKSTKVSPQLCELRNLITAGYLIVRSAQFRKE
                     SRGLHYNTDHPGKSSLLQNIIL"
     gene            1102..1983
                     /locus_tag="VEV83_00975"
     CDS             1102..1983
                     /locus_tag="VEV83_00975"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYK43708.1"
                     /translation="MYYLLYGFLFLFSLLPFWILYGISDLFHFIVYHLWGYRKEIVMN
                     NLAIAFPQKSVEERKKIAKQFYQNLIDSFIETIKLLSISRRELNRRFTCDYSFVNSYY
                     EKGLSVQVHLGHFFNWEYANLSVGINSDYAVLVVYMPLLNRAMNRIFLKLRTRFGAKM
                     IAATRFRKEFLPHVKSSNCLVFVADQNAGMPDSAYWSHFFGKLVPFVTGPEKTARLNN
                     NPVLFVKFHKMKRGFYDAKFQLLSDAPRSLHEGELTKRMIAKIEESIEEEPANYLWSH
                     RRWKHDFDPARHGKLVI"
     gene            complement(2079..>2469)
                     /locus_tag="VEV83_00980"
     CDS             complement(2079..>2469)
                     /locus_tag="VEV83_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYK43709.1"
                     /translation="LDGGFRAWLNAGEPIDMIIDVEPSELALDIPHDEHLVVIDVRRE
                     AEFGDGHVKGAINIPLADLADAGSMATLEDDQNLYITCRTGYRSVIAASLLKRQGIHN
                     LYNVLGGWEKIKLEEKIKQEKETSVLN"
BASE COUNT          696 a          543 c          560 g          670 t
ORIGIN      
        1 atatgttttg aatctttcaa acaaccagat agaaaaaatt ttagcgccgg ttacgatgct
       61 tgcaacaggc gggctgggac aagtataccg cagtacaaca aatccaaaga tcgctaccgg
      121 cgatggcatc gctatggtgt atcgcgccaa gggaaaagtt gaaaacatgg agttcatcca
      181 gtttcatcca acagccttat acgagcctgg agtttctccc tcttttttga tcaccgaagc
      241 agtgcgtggc gacggcggca tattgcgcaa caaggccgaa gaagcgttca tggagcatta
      301 tgacgaaagg aaggacctgg cacctcgtga tatcgtggcg agggctattg acaatgaaat
      361 gaagcgcatg ggaacggaac atgtttacct cgactgccgg cacatggaca caaataaatt
      421 cattcatcac tttcctaaca tctacgaaaa atgtttgagt atcggggtgg acgttttcaa
      481 acaaatgata cccgttgcac ctgctgcgca ttacagttgc ggcggtatta aaacaaatga
      541 gtgggcatgc acatcgatca caaatttata tgcatgcggc gaatgtgcga gcaccggctt
      601 gcatggcgcc aaccgtcttg cgagcaacag tctcctggaa gcgatggttt tcggacatcg
      661 cgcataccta agtgtggtta atgaatcgaa tgacggcact gccgccgtgc gcccatgggc
      721 tgaagtgcag gtacccgact ggaatgcaga gggcacttca gagccgaaag aaatgatctt
      781 aattacccaa agcctgaaag aactgcaaca gatcatgacc gattatgttg gaatagttcg
      841 caacgacgtg cggcttgatc gcgcaatgaa acgccttgac cttttgtttg atgaaacgga
      901 agctctgtat aaatcgacca aagtatcacc acaattgtgc gagctgagaa atctcatcac
      961 agccggatat cttatcgtga gaagcgccca attcaggaag gaaagccgcg gcctgcatta
     1021 caacacagat caccccggca aaagcagcct gttgcagaac atcattctat aaccaattat
     1081 atttgggcct accgatcgcg catgtattac ctgttgtatg gatttttatt tcttttttcg
     1141 ctcctgcctt tttggatcct gtacggcata agcgatcttt ttcattttat cgtgtatcat
     1201 ctttggggct acaggaaaga aattgtgatg aacaacctcg ccatcgcgtt tccgcaaaaa
     1261 tcagtggagg aaagaaaaaa gatcgcgaaa caattttacc agaacctcat agacagcttt
     1321 atcgagacca taaaactctt aagtatctcg agaagagaac tcaacaggag atttacatgt
     1381 gattattctt ttgtaaatag ttattatgaa aaaggtttga gtgtccaggt gcatcttgga
     1441 cattttttta actgggagta tgctaatctt tcggtaggta tcaattctga ttacgccgtg
     1501 ctggttgtat acatgccgtt actgaaccgc gctatgaata gaattttttt gaaactaagg
     1561 acacgatttg gcgcaaaaat gatcgctgct accaggttcc gaaaagaatt tctgccacat
     1621 gtaaaaagca gtaactgcct cgtctttgtt gctgatcaaa atgcaggcat gcctgattct
     1681 gcctactgga gccatttctt tgggaaactg gttccttttg ttaccgggcc cgaaaaaacg
     1741 gccaggctaa acaataaccc ggtgctgttt gtgaaatttc ataaaatgaa acgtggtttc
     1801 tacgatgcaa aatttcaatt actttcagat gctccgcgaa gtttgcatga aggggagctc
     1861 accaaaagga tgatcgctaa aatagaagag tctattgagg aagagcctgc aaattattta
     1921 tggagtcacc gcagatggaa acatgatttt gatccggcgc ggcatgggaa gttggtgatt
     1981 taggattatt gggttattgg ggtattgagt tgtcggttat ctggttattg tcaaattacg
     2041 atctccctaa taaaccaatt aacgaataaa ccaataacct aatttaaaac actcgtttct
     2101 ttttcctgtt tgatcttttc ttcgagcttt attttttccc agccaccaag aacgttgtaa
     2161 agattatgga tcccttgtct ttttagcagc gatgcagcaa ttacactgcg atacccggtg
     2221 cgacaagtga tatacagatt ttgatcgtct tcaagtgttg ccatgctgcc tgcatctgca
     2281 aggtccgcca gcggaatatt gattgcacct ttcacatgcc cgtcgccaaa ctccgcttct
     2341 cttctcacat ctattaccac gaggtgctca tcatgcggaa tgtcgagtgc caactcagaa
     2401 ggttcaacgt caatgatcat gtcgatcggt tcacctgcgt ttaaccatgc gcggaatccg
     2461 ccatccaaa
//
LOCUS       DASQJI010000028        10101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1703, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000028 DASQJI010000000
VERSION     DASQJI010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10101
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VEV83_00985"
     CDS             complement(<1..863)
                     /locus_tag="VEV83_00985"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK43710.1"
                     /translation="MNLMIRKAILACSVALVISVKMFGQLDTAAKNLTLQECIAMALK
                     NNSDVQHQQVTSDIARVDWQGAKGNMIPTLNGDISHGINQGRSIDPFTNSYANQRISF
                     GNYSLNSSVTLFNEFAIQNNIKQTRLFFDASREQVQQTKDLIAMNVILEYLQVLTNAD
                     LVEVAKQQMEVSAKQVERLDILNQEGAISPSQLYDLKGQYANDQLGLVNAENSLETAK
                     VALAQLMNVPYQKNMGFEHIGLTDAMAANKGTTDSIYQAALQNLAIVKAAELHRRSAV
                     YGVKTYRSLRYP"
     gene            complement(880..1545)
                     /locus_tag="VEV83_00990"
     CDS             complement(880..1545)
                     /locus_tag="VEV83_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK43711.1"
                     /translation="MIELKHISKWVNIGGAKTYILKDVNLSIGEGEFVSIMGPSGSGK
                     STLLNVIGMLDDFNEGEYTFMGEAVHKLKEKHRSQLYKQYIGFVFQAYHLIDELTVYE
                     NIETPLIYQNSKTSERKAIVADTLDRFNIVGKKDLFPTQLSGGQQQLVGIARALVAKP
                     RLLLADEPTGNLNSKQGEEIMELFEKLNKEDRVTIIQVTHSEKNAGYGSRIINLLDGR
                     IES"
     gene            complement(1714..2445)
                     /gene="aroE"
                     /locus_tag="VEV83_00995"
     CDS             complement(1714..2445)
                     /gene="aroE"
                     /locus_tag="VEV83_00995"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220870.1"
                     /note="AroE; catalyzes the conversion of shikimate to
                     3-dehydroshikimate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HYK43712.1"
                     /translation="MRQYGLIGFPLKHSFSQNYFHHKFLNEGITDAEFLNFSIAKISE
                     VETIFDEHPFLKGLAVTIPHKKAILEYIDEISDEVKQTGACNCVQITSGKKAGYNTDI
                     TGFETSFKKNLQPYHKKALILGTGGAAAAVEYVLRKNQIGYAFISRTPAKDMFTWDQI
                     DEKLLDEFKVIINCTPLGTYPNTAEKPNMPYHFLTPRHYLFDLVYNPPQTQFLLEGEK
                     HGCYVQNGYEMLVIQAEENWKIWNS"
     gene            complement(2445..3215)
                     /locus_tag="VEV83_01000"
     CDS             complement(2445..3215)
                     /locus_tag="VEV83_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HYK43713.1"
                     /translation="MNFGLTQIPDRNEKPRASGITMIMDKGLSIEEAKNFLSIAHPHI
                     DILKLGFGTSFVTPNLKEKIEVYQGYDIPVYFGGTLFEAFLIRNQFNDYITLCKNYNI
                     TYMEVSDGSITIPHAEKCGYIEKLTKYGTVLSEVGSKDAEHIIPPYKWIELMRSELEA
                     GSSYVIAEAREAGNVGIYRGSGEVREGLVQEILTQIPGEKIIWEAPQKAQQLYFLELL
                     GCNANLGNIAPSEVIPLEAMRLGLRGDTFHLFLNKELQ"
     gene            complement(3286..4710)
                     /locus_tag="VEV83_01005"
     CDS             complement(3286..4710)
                     /locus_tag="VEV83_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK43714.1"
                     /translation="MHEHSSDQNAYEIEELLRHYEELRAGRNASFLDEESFEIIIDYF
                     DEKDEFSKALEATDTALSYYPYSAQLLIKKADLLIATHHYAEALEILKQAESFDASDI
                     DIYILKTDAYLALDMQGEAARLLEEALLFFEGDEKVDLLFELTDVYDDYEDFEKVFDC
                     LKLILEQEPTNEEALYKICFWTDFTGRNEESIRLHQSLIDQHPYSELAWFNLGSAYQG
                     LKLYEKAIDAYQYAVVINEKFDYAYRNMGDAYIRLRKYKEAIEVLEKVCEITRPEEVI
                     FEAIGHCYHRIGKYAQARFNYRKASHINPTDSKLYYKIALTYINEELWESAVKQLENA
                     LRIHRNVPEYNLAMGQCAMKLENYKDAVHYFSLVVRSRPKNVKGWEALIQCLFEASYF
                     EEALQQCKAAIKMTEGKPVFYFLYSAVLFAAGKSKEGLVQLEHGLKEAPSQVKKFVEF
                     NPSILQNSQVVDMIARYRKPKRNR"
     gene            4829..5185
                     /locus_tag="VEV83_01010"
     CDS             4829..5185
                     /locus_tag="VEV83_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43715.1"
                     /translation="MKRLFSLKRVFLLLAFVVSFQTFAAFVGKRTNGDGDKKITLKNF
                     SKYSNKPSAYPSLRLSQFQFKGSQNLYQIHLNNSIEGQSMIRLQNGNTTYVYPYKYTV
                     KVPLFKTPAPPSATLR"
     gene            complement(5201..5821)
                     /locus_tag="VEV83_01015"
     CDS             complement(5201..5821)
                     /locus_tag="VEV83_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43716.1"
                     /translation="MKKLLLIPTAFLLYAHALTQSAKIISDCTISYSVTGAGSQNAAQ
                     FSGAAKTVYIRGREIRTDLSSDHINQTIFYNSNTGQATVLKEVGQSKYISQYNAAEWE
                     KENEMYKVAGFSLTGVTKKILNFDCKEAVLQLKNGKTYTIYFTPEIIPSVSENPFEFK
                     DVPGFVLKYESSTQDKRLEYTATNINFDPVPAYQFEIPKTGYRVLH"
     gene            complement(5882..6745)
                     /locus_tag="VEV83_01020"
     CDS             complement(5882..6745)
                     /locus_tag="VEV83_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HYK43717.1"
                     /translation="MRSFKISSSITNRETFSLQRYLREVSKLDMISSKEEELLTRRIK
                     KGDQKAIEQLVKANLRFVVSVAKQYQYQGLPLSDLINEGNVGLIKAATRFDETRGFKF
                     ISYAVWWIRQNILQAIAENGKLIRLPMNKFNLFARVRSESEQFEQTYEREPSTGELAD
                     SLHLEESDINDAMNVSQPHVSVDAQFADSEQTLCDVIVNSNAEMADRALHHESLRTDV
                     QNVLKILSTRQKEILCSLYGIGTEQTLSLDDLGSKYNLSRERVRQIRDKALSKIKSHH
                     TCKYLCCYLTE"
     gene            6991..8988
                     /gene="tkt"
                     /locus_tag="VEV83_01025"
     CDS             6991..8988
                     /gene="tkt"
                     /locus_tag="VEV83_01025"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HYK43718.1"
                     /translation="MNSDLTQLCINTVRILSADAVQKANSGHPGTPMGTAPMGHVLWS
                     RVMNYNPKNPDWPNRDRFVLSAGHACMLQYAYLYLTGYDITLDDIKNFRQLGSKTAGH
                     PEYGLLSGIEVTTGPLGQGFANGIGMAIAQQYLASRYNKEGFNLFDYNIYAICSDGDL
                     MEGVSAEAASLAGHLKLGNIIYLYDNNHISIEGDTALAFDNEDVAKRFQAYGWHTQAV
                     DDGNDVDAIEAAIQNAKQETERPSLILVRTHIAFGSPHAVDTPESHGAPLGAEEVKAT
                     KKNLGFDPEKSFYVPDEVLEYYRKAGEKAAEGEKKWNDLYASYKEKFSELANEYELFS
                     RRDLPDGWKEKLPVFNGDEKVATRSASGKTLNAIADYFPLLIGGSADLAPSTDTLLKK
                     YESFSADNHGGRNFHFGVREHSMGSVLNGMAVTKGITPYGATFLIFSEYMRPPIRLAA
                     IMRIKPIYVFTHDSIGLGEDGTTHQPVEQLISLRSIPNLTVIRPADANETVQAWRVAL
                     EHSDGPVALILSRQKLPIIDQDKHAKASELERGAYILSDANSPQIILIATGSEVQLAL
                     KAQVLLKEQDIASRVVSMPSWELFEKQDTAYKEKVFPPSTRKRLAIEAGSPLGWHKYV
                     TDEGDVIGVTKFGESAPGDEVMKAYGFSVENVVTKAKGLLQ"
     gene            9146..9307
                     /locus_tag="VEV83_01030"
     CDS             9146..9307
                     /locus_tag="VEV83_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43719.1"
                     /translation="MKPVFEFLLACLLVFVAGCSAIAGIFNAGVWAGIIVLFTISALL
                     ILFLVKARK"
     gene            9634..>10101
                     /locus_tag="VEV83_01035"
     CDS             9634..>10101
                     /locus_tag="VEV83_01035"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYK43720.1"
                     /translation="MKKIFFTLFAISHWLLTVHAQSFQISGQVFATNKPVEAATVRLL
                     KADSSILKQTVSDRDGFFSINESQEGIYLVSIQAVGSQTYFSDMISLNDSHPQYDLKA
                     IELTQTANLQDVTVTAKKQFIEQKIDKTVINVDASPTSVGLSALELLEKTPGVT"
BASE COUNT         2722 a         2229 c         2118 g         3032 t
ORIGIN      
        1 gggtatctca gcgaccggta agtcttaact ccgtaaactg cgcttcgcct gtgcaactcg
       61 gcagccttaa cgattgccaa attctgtaag gcggcctggt agatcgaatc tgtcgtgcct
      121 ttatttgccg ccatagcatc cgttaacccg atgtgttcaa accccatatt tttttgatac
      181 ggaacattca ttaattgagc gagtgccact ttcgcggttt cgagcgaatt ttctgcattc
      241 acgagcccca actgatcatt tgcatattgc cccttcagat cgtaaagctg gctcggacta
      301 atagctcctt cctggtttaa gatatcgagc ctttcaactt gtttagcaga aacttccatt
      361 tgctgctttg ccacttccac aaggtcagca tttgtcaaca cctgcaagta ctctaagatc
      421 acattcattg cgatgaggtc cttcgtttgc tgcacctgct ccctgctcgc gtcaaaaaag
      481 aggcgggttt gtttgatatt gttttgaata gcgaactcat tgaaaagtgt cacgctgctg
      541 ttcaggctgt agttgccaaa acttattcgt tgattggcgt agctgtttgt aaacgggtca
      601 atgctgcgac cctggttgat gccatggctg atatcaccat tgagggttgg gatcatattt
      661 cctttggctc cctgccagtc aacccgtgcg atgtcagacg ttacctgctg gtgttgaacg
      721 tcggaattgt ttttcaaagc catggcaata cattcctgca gcgtgagatt ttttgctgcg
      781 gtatccaact gaccaaacat ttttaccgat atcaccaatg ccacggagca agctaaaatc
      841 gcttttcgta tcatcaaatt catgtgcgtt ctataagatt tatgactcta ttcttccgtc
      901 gagtaaattg attatcctgg agccatagcc ggcattcttt tcagaatgtg ttacctgtat
      961 gatggtcaca cggtcttcct tgttcaattt ttcaaaaagc tccatgatct cttcgccctg
     1021 tttggaattc aaattacctg ttggttcatc tgcaagcaac aatctcggct tggccaccag
     1081 tgccctcgcg atacctacca attgctgctg gccaccggat aactgggttg gaaacagatc
     1141 ctttttgccg acgatattaa aacgatccaa tgtgtctgcg acgatcgctt tacgttcaga
     1201 cgtttttgaa ttctgatata tcaaaggggt ttctatattt tcataaaccg tcagctcatc
     1261 gataagatga taagcctgga aaacaaaacc aatatattgt ttatatagct gcgatctatg
     1321 cttctctttt aatttatgaa cggcttcgcc catgaatgtg tattcaccct cattaaaatc
     1381 atcgagcatg ccgatcacat tcagcaatgt agattttcct gaacctgacg gacccattat
     1441 cgatacaaat tccccttccc caatgctgag attcacgtcc ttcaaaatat atgtttttgc
     1501 cccgccgatg tttacccatt ttgaaatgtg ttttaattct atcatgccgt atagccaggt
     1561 ttttagtttt tgactacaac aagtatatga aagatgtacc aattgtagca gcgattgaaa
     1621 agcaatagct tagggtttta tcagctgtca tgactgtccg cttttgatac agttattgtt
     1681 catttttagt atggtgaatt tgaagcggca agtttaggaa ttccatattt tccagttctc
     1741 ttcggcctgg attacgagca tttcgtagcc attctgaacg tagcacccat gcttttcccc
     1801 ttccaaaaga aattgcgttt gtggagggtt ataaaccagg tcaaataaat aatgcctcgg
     1861 tgttaagaaa tggtacggca tgttcggttt ttccgctgtg ttgggatacg ttccgagcgg
     1921 tgtgcaattg ataatgactt tgaattcatc caaaagcttt tcatcaattt gatcccatgt
     1981 aaacatgtcc ttagccggtg ttctggaaat gaaagcgtaa ccaatttggt tttttctcag
     2041 aacgtattcc acggcggcag cagccccacc cgtacccagg atcagcgcct tcttgtgata
     2101 gggttggaga ttttttttaa acgatgtttc aaaaccggtg atatcggtat tatagcctgc
     2161 cttttttcca cttgttatct gaacacaatt acaggctcct gtctgtttta cctcgtcaga
     2221 gatttcatcg atgtactcga gaattgcttt tttgtggggg atcgttactg ccagcccttt
     2281 gagaaaagga tgctcatcga agatcgtttc cacttcgctt attttggcaa tagaaaaatt
     2341 taggaattct gcgtcggtaa tgccctcgtt caaaaattta tggtgaaaat aattctgaga
     2401 gaaagaatgc tttagtggaa aaccgatcaa tccatattgc cgcattattg cagttcttta
     2461 ttaaggaata agtgaaaagt gtctccccgc agaccaagcc gcattgcttc aagcggaatg
     2521 acttccgatg gagcgatatt gcctaagttg gcattgcaac ccagcaattc aagaaagtag
     2581 agttgctgtg ctttttgcgg cgcttcccaa atgatctttt cacctggaat ttgagtgagt
     2641 atttcctgca cgagcccttc gcgcacttcg ccagaacccc gataaatccc aacattccct
     2701 gcttctcttg cttcagcaat aacatacgac gagcccgcct ccagttccga acgcattaac
     2761 tcgatccatt tgtatggcgg tataatatgc tctgcatcct tgctgcccac ttcgctcaaa
     2821 acagttccat actttgtgag tttttcgata tagccgcact tttctgcatg cggaattgtg
     2881 atcgatccat cgcttacctc catgtaggtt atgttgtaat ttttgcaaag ggtaatgtaa
     2941 tcattgaact ggttacggat caagaacgcc tcgaaaagcg ttccgccaaa ataaactgga
     3001 atgtcatagc cttggtagac ctctattttt tctttcaggt tgggcgttac gaacgaagtt
     3061 ccaaatccga gtttcaaaat atcaatgtgt ggatgtgcaa tgcttaggaa attctttgcc
     3121 tcttcaatgc tcagaccctt gtccatgatc atcgtaattc cacttgcgcg tggtttttcg
     3181 ttacggtcag gtatctgcgt aagtccaaaa ttcatgaaac agttttgaga gcgcaaattt
     3241 aagggaacgt tccttacaca tgaagataac cttaatgagt gaaggctatc tgtttctttt
     3301 tggtttccga taacgggcaa tcatgtctac tacctggctg ttctgaagga ttgagggatt
     3361 aaactcgaca aattttttca cctggcttgg tgcctctttt aaaccatgct ccaattgaac
     3421 aaggccttct tttgacttgc ctgcggcgaa aagtacagcg ctatacagaa aataaaatac
     3481 cggcttgccc tcagtcattt ttatcgcggc cttgcattgt tgtaacgctt cttcaaaata
     3541 cgatgcctca aacaggcact gaataagcgc ttcccaacct ttcacgtttt tagggcggct
     3601 tcttaccaca aggctgaagt aatgtaccgc gtctttgtaa ttttccagct tcatggcgca
     3661 ttgacccatg gccaggttat attccggaac attccggtgt atgcgtagcg cattctccaa
     3721 ctgttttaca gcactctccc acagctcttc gttgatataa gtgagggcta tcttataata
     3781 taacttactg tcggtgggat ttatgtgaga cgcctttcta tagttgaacc gcgcctgcgc
     3841 gtatttgcct atgcgatggt agcaatggcc gatcgcttca aaaataactt cctcaggccg
     3901 tgtgatctcg caaacctttt ccagcacttc tattgcctct ttgtatttgc ggagtcttat
     3961 gtaggcatcg cccatgttac ggtacgcata gtcgaatttt tcgttgatca caactgcgta
     4021 ctggtaggca tcgatcgctt tttcatacag tttgaggccc tggtaggccg atccgagatt
     4081 aaaccaggca agctcagaat atggatgctg gtcaatgagg ctttgatgga ggcgaatact
     4141 ttcttcattg cgccccgtaa agtcggtcca gaaacatatt ttatacaatg cctcctcatt
     4201 cgttggctcc tgttcaagta tcaacttcag gcagtcaaaa actttttcaa aatcttcgta
     4261 atcatcatac acatctgtca gttcaaaaag caggtcaacc ttttcatcgc cttcaaagaa
     4321 taacagcgcc tcttcgagca ggcgtgctgc ctccccttgc atatcaagag cgaggtaagc
     4381 atcagtcttc aaaatgtaaa tatctatgtc gctggcatcg aaggattcag cctgtttcaa
     4441 tatttcaagg gcttctgcgt aatgatgggt ggcgattaat aggtctgcct tcttaataag
     4501 taattgtgca gaataaggat aataacttaa tgcggtgtcc gttgcttcga gcgctttcga
     4561 aaattcatcc ttttcgtcaa aataatctat gataatttca aatgattctt catccaggaa
     4621 cgaggcattc cttccagcgc gaagttcttc ataatgcctc aagagttctt ctatttcata
     4681 tgcattttga tccgatgaat gctcgtgcat aagttctctg ttgcctgaaa gttaccgttg
     4741 gaaattaaaa tttccaattt tgtaacaaat ctttatcaaa aagcgttata taattagaca
     4801 acttgttaaa ttttcgtata ttcgcgtcat gaaaaggctg ttttcgttaa aaagagtgtt
     4861 tctgttactg gcttttgtag tcagttttca gacattcgca gcttttgtag gcaaaagaac
     4921 aaacggagac ggagacaaaa agataaccct gaaaaatttt agcaagtatt caaacaaacc
     4981 ttctgcttat ccttcgttaa gattgtctca gttccagttt aagggttctc agaacttgta
     5041 ccagattcac ctgaataatt ctatagaagg gcagtcaatg atcaggctcc agaacggcaa
     5101 tacaacctac gtatatccgt acaagtacac agtgaaggtc ccacttttca aaacaccagc
     5161 tcctccttct gcgaccctcc gctaataagt ctctctcatt ttaatgtaag acgcgataac
     5221 cggttttcgg tatttcaaat tggtatgcag gtacggggtc aaaatttata ttagtagcag
     5281 tatactccaa tcttttatcc tgcgtactgc tttcgtattt cagcacaaat cctggtacat
     5341 ctttaaattc aaaaggattc tcggagaccg acgggatgat ctccggcgta aagtaaatag
     5401 tgtacgtttt cccattcttc aactgaagga cggcctcttt acaatcgaaa ttcaaaattt
     5461 ttttcgtaac gcccgtaagc gaaaagccgg ctactttata catttcgttc tccttctccc
     5521 attccgctgc attgtattga gaaatatact tagattggcc cacttccttc aaaacagttg
     5581 cttgtcctgt attgctgttg taaaaaatag tttgattgat gtggtcgcta ctcaggtcgg
     5641 ttcttatttc ccttccacga atgtaaacag tcttcgccgc gcccgaaaat tgggcggcgt
     5701 tctgtgatcc ggcgccagtt accgaataac tgatggtaca gtcggaaata atttttgccg
     5761 attgggtcaa agcgtgcgca tacaaaagaa aagcagttgg tattagtaat aattttttca
     5821 tccagcagaa tctacgttaa atgtaagaac attctgctga aacaaacgct gcttttgttt
     5881 gttattcggt caaataacaa caaaggtatt tacacgtatg atgcgatttg atcttgctca
     5941 acgctttatc acggatctgg cgcacccttt cccgcgataa attatatttc gatccgagat
     6001 cgtcaagact tagtgtttgc tccgtgccta ttccatataa cgagcaaagg atttcctttt
     6061 gccttgtgct taatattttc aatacattct gcacatctgt tcttaacgat tcatgatgaa
     6121 gcgctctgtc ggccatctct gcatttgaat tcacgatcac atcgcacaac gtttgttctg
     6181 aatccgcaaa ttgagcatca acgcttacat ggggctggct aacattcatc gcatcgttaa
     6241 tgtcagactc ttcaagatgt aaactgtccg caagttctcc ggtagaaggt tcgcgttcat
     6301 acgtttgttc aaattgttcg gattcagacc taacacgcgc aaacagattg aatttattca
     6361 tcgggagacg aataagtttc ccattctctg caatcgcctg cagaatgttt tgacggatcc
     6421 accacactgc gtatgaaatg aatttgaaac cgcgcgtttc gtcgaaccgg gttgctgctt
     6481 ttatcaatcc aacattccct tcgttgatga ggtctgacaa gggcaatccc tggtactgat
     6541 attgtttcgc cactgagaca acaaaacgga gatttgcttt cacgagttgt tctatagctt
     6601 tttgatcacc ttttttaatt ctgcgggtta atagttcttc ttccttggag ctgatcatgt
     6661 ccagctttga cacttcccgc aaataccttt gtaatgaaaa tgtttcccgg ttggtgatag
     6721 aggatgaaat tttgaacgag cgcatacaat ggattttgaa atgcttaaat aattaagcct
     6781 tgctgcaagg ttgctatgcg caaaaaacta caattagttt tcttagatag ttaatgaagt
     6841 attgggaaaa tttgctgagg aatcaccaag atagaaaaat ctttcaaact aacaaaaaat
     6901 aataaagtta ttaacgaaag gttttagcgg ctggcctgca aaatattatc atccatttta
     6961 ttttatcttg ccgacctaaa aaatacaggg atgaattctg acctaactca gttatgcatt
     7021 aacacagtga ggatcttgtc tgcagacgct gttcagaaag ctaattccgg acacccgggc
     7081 actccgatgg gaactgcgcc aatgggccac gtgctttgga gccgggttat gaactataac
     7141 ccaaaaaatc ctgactggcc aaatcgggac cgtttcgtct tatctgcagg ccacgcgtgc
     7201 atgttgcaat atgcttactt gtatttgaca ggctacgata ttacgctgga cgacataaaa
     7261 aatttcaggc aactgggcag taaaaccgca ggtcatccgg aatatggttt gctaagtggc
     7321 atcgaagtaa ctaccgggcc gctcgggcag ggatttgcga atggaatagg tatggcgata
     7381 gctcagcaat acctcgcctc ccgctataat aaagaagggt ttaatttatt tgactataat
     7441 atctatgcga tctgcagcga tggtgattta atggaaggtg ttagtgctga ggccgcgtca
     7501 ttggcagggc acttaaagtt gggcaatatc atttatctgt acgacaacaa tcatatttca
     7561 attgaaggtg atactgccct ggctttcgac aatgaagacg tcgctaagcg ctttcaagca
     7621 tacgggtggc atacgcaggc agtagatgat ggaaatgatg tagacgctat cgaagccgca
     7681 attcaaaatg ccaagcagga gaccgagcgg ccttcgctga tacttgttcg aacgcatatt
     7741 gcgtttggca gtcctcatgc agttgataca ccagagtcgc atggcgcgcc gcttggagcg
     7801 gaggaagtaa aagcgacgaa gaaaaatttg ggtttcgatc cggaaaaatc tttttatgtc
     7861 ccagacgaag tgcttgaata ttatcggaag gcaggagaga aggctgcaga aggtgaaaaa
     7921 aaatggaatg acttgtatgc ctcctacaaa gaaaaatttt cggaactagc gaacgaatat
     7981 gaattattca gccgccgcga cttaccggat ggttggaaag aaaaattacc tgtcttcaat
     8041 ggtgatgaaa aggttgctac gcgaagtgca tcagggaaaa cgttaaatgc gatcgccgat
     8101 tattttcctt tactgatcgg aggctcagca gatcttgctc cttcaacaga cacattactg
     8161 aaaaaatatg aatcattttc cgccgacaac catggtggca gaaattttca tttcggagta
     8221 cgcgagcact caatgggctc agtattaaat ggaatggctg taacaaaagg tataactccg
     8281 tacggcgcca cgtttctgat ctttagcgaa tacatgcgtc ctccaatccg gcttgcagcg
     8341 atcatgcgga ttaagccaat atatgttttt actcatgata gtattggcct cggtgaagac
     8401 ggcaccacgc atcaacccgt agaacaacta atttctttgc gctcgattcc taacctcaca
     8461 gtcattcgcc cggcagacgc aaacgaaacg gtacaagcct ggcgtgtcgc gctggaacat
     8521 tcggatgggc ccgtcgcgtt gatcttatcg agacaaaaat tacccataat cgaccaggat
     8581 aaacacgcga aagcgtctga acttgaacgc ggagcttaca ttttgtctga tgcgaattct
     8641 cctcaaatca ttctgatcgc tacaggcagc gaagtgcagc ttgctttaaa agcacaggtg
     8701 ttgctcaaag agcaggatat cgcttcgcgg gttgtcagta tgccatcctg ggaattattc
     8761 gaaaaacaag acacagcata caaagaaaaa gtttttcctc cttctaccag gaaacgcctc
     8821 gcaattgaag ccggatctcc gctcggatgg cataagtatg ttacagatga gggggacgtg
     8881 atcggcgtga cgaagtttgg cgagtctgcg ccgggcgatg aagtgatgaa agcttatgga
     8941 ttctcagttg aaaatgtggt tactaaggca aaggggctgt tacaataggt tctataaatt
     9001 taggcgttgc ctattcaatt gaaacgatgc ggttgaacag ctgctcactg ctgaaaaatt
     9061 taccctaaca ttgttttcca cacggtcagg tttcacgatc aattagtcgg cacagttttt
     9121 tgttccatta agtaaaagct gttttatgaa acctgtattc gaatttttgt tagcgtgttt
     9181 gttggtgttt gttgccgggt gttctgcaat tgccgggatt tttaacgcag gcgtatgggc
     9241 tggcatcatc gttctcttca ctatcagtgc cctccttatt ttgtttttag taaaggcgag
     9301 aaaatagttg caccaaacgg ctgtagcaac caacactttc gaaaatactt tcagctgact
     9361 gtaaaatgag tacgttgctc catccaatga gcgtttttat tttaatgcaa cgatagtcct
     9421 agcagtgtag cgagaaaaga cggtttctca gacagcttct cgttaataca cagtttcctt
     9481 tccgtcaaac ttcgaagccc gcacgaaaca acttcctttt ttatccaatc aaaagtaaat
     9541 tctgccgctt atacataagc atgtactatg caagacatag tatctatatt tgttctgtaa
     9601 tcatttaaac aaggaactat aaacgcatct aaaatgaaaa aaatattttt taccctattt
     9661 gctataagcc attggttgtt aacggtacac gcacaaagtt tccaaatcag cggccaggtc
     9721 ttcgccacaa ataagccagt agaggccgca accgtccgcc tgttgaaggc tgattcgtcg
     9781 attctaaagc agactgtttc agaccgggat ggattcttct caatcaacga aagtcaagaa
     9841 ggtatctacc tggtctccat acaagctgtc ggcagccaaa cgtacttttc ggacatgatt
     9901 tctttaaatg atagccatcc gcaatatgat ttgaaagcaa tagaattaac gcagaccgct
     9961 aatttgcagg atgtgaccgt cactgcaaaa aagcagttca tcgagcaaaa aatcgataag
    10021 acagtgataa acgtcgacgc ttcgccgacg agtgttgggc tttcagcttt agaactcctg
    10081 gagaaaacac ccggtgttac c
//
LOCUS       DASQJI010000029         2652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2305475,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000029 DASQJI010000000
VERSION     DASQJI010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2305475"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VEV83_01040"
     CDS             complement(<1..978)
                     /locus_tag="VEV83_01040"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK43721.1"
                     /translation="MFRRNIVTAFRSLKKDLRYSVTNLAGLSIGITCCILILSFVKYE
                     LSFDQFHSKKDRIYRVNYDVLMGGNETISPSVPVFVAPQLESKFPEIEDAVRFSTEWV
                     PRTIRHGNVLFDESNFCYADPGFFKVFDFKAAEGDLQTALNKPNTVIITKSIATKYFG
                     KSDPTGQVLVFNNKKEFVVSAVAEDVPSNSHFSFDFLTSFYSVDGFDSLEAQQSWNNP
                     NYTTFLLLKPNTNVDALTKKIDGWVNPPAQDQSVSQNSLHLRLEPLSDVHFDTQAYNY
                     KNTLAVTDRKYINIFITIGILILLIACANYINLSTAKASARSKEVGIRKV"
     gene            complement(1384..>2652)
                     /locus_tag="VEV83_01045"
     CDS             complement(1384..>2652)
                     /locus_tag="VEV83_01045"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK43722.1"
                     /translation="SLLLFAVLVSFFAGVYPAIILSGTQVMGVLKKGFSFTGGNNMLR
                     KTLIVAQFGISVFLIIYTVIIMQQMHYMQTKNLGYDKDHVVVLPIGGSMYDNIQTLKD
                     AFTNVKGVESVTASYETPEYVEWGDGLTAIDEKGKHDISLNAMPVDLDFIKTMKMQLV
                     AGRDFQQSDFAMMQDTSHNGANYHVPYIINETLAKKIGWTPQQAIGRQVENRALGPVV
                     GVVKDFNFSSLHDPIGPLLMFLGRDFSRDFMLRINGNDIEGTIGRLEMVWKQRIPDRP
                     FNYHFLDEDYNKLYLAEQRSSALFSVAAGLAIILACLGLFGLAAFTTVQRTKEIGIRR
                     VLGARVSSITLLIAKNFLQLIGVAILIAAPVAWWAGNKWLQDFAFRIPVQAYVFVATA
                     IITALIALCTVGYHSVRAALTNPVKSLRTE"
BASE COUNT          749 a          606 c          571 g          726 t
ORIGIN      
        1 cacctttcgg ataccgactt cttttgaacg cgcagaagct tttgcagtgg acaagtttat
       61 ataattggcg caggcgatca ataagatcaa tatcccgatc gtaataaaaa tgttgatgta
      121 tttacgatct gttacagcga gtgtattttt atagttgtat gcctgcgtgt caaaatgaac
      181 atcgctgagt ggttctaacc tgagatgcaa agagttttgg gaaacagatt gatcctgcgc
      241 cggcggattt acccagccat cgatcttttt agtaagcgcg tcgacatttg tgtttggctt
      301 tagcaaaaga aaagttgtgt agttgggatt gttccatgat tgctgcgcct cgagactatc
      361 aaatccatcg acgctataaa atgaagtaag aaaatcaaaa ctgaagtgtg aattggaagg
      421 aacgtcttcg gcaacagcag aaacaacaaa ctccttttta ttattaaaga ccaatacctg
      481 cccagtcgga tcggacttgc caaaatattt tgttgcaatg ctttttgtaa ttattacagt
      541 attgggtttg ttgagcgctg tttgaaggtc gccttctgct gctttaaaat caaatacttt
      601 aaaaaagccg ggatcggcat aacagaaatt gctttcatca aataaaacat tcccgtgcct
      661 gatcgttctc ggtacccatt cagtggaaaa acgaactgca tcttcgatct caggaaactt
      721 actttccaat tgcggcgcaa cgaaaacggg gacggaaggt gaaatagttt cattcccacc
      781 catcaacaca tcataattaa ccctgtaaat gcggtctttc tttgaatgaa actggtcaaa
      841 gctcaattca tattttacga aagaaaggat gagtatgcag caggtaatgc ctatagatag
      901 tcctgccaaa tttgtgacag aataacgaag atctttcttc agcgatcgga acgctgtaac
      961 aatatttctt ctaaacatag gtgtttgtct tctctatcca cttagagaag aggaatttta
     1021 aatgtatgat cggttttgag tacgtcatag ttggcgacaa gacatggctc cggctctgcg
     1081 ttgaaagcgc ggcaaccgtt atgccaatac ggaaatcctt tactgcaaag ggtttacggg
     1141 atcgaacgct gctttaaact gtacgaaaac ggacatgtct tgtacgaaaa tgcaataggg
     1201 aaacgtccgc caatggcggg ggatattaat tggtcaaatg agtagcagct ctcacaaaaa
     1261 agcgctgcct ttttgcatca ggcgtcagca gtgcgtcatt cgttggataa tcgcatatgt
     1321 tccttgaaca tcagcgccgt cacgaattca ccatgtactg cactctttca ctcatcactc
     1381 tcatcattcc gttcgcaatg atttcaccgg gttggtcagc gcagctctta ccgaatgata
     1441 acctacggtg cacaatgcga tcaacgcagt tataattgcg gtggcgacaa acacatatgc
     1501 ctgcacagga atgcggaaag caaaatcctg caaccattta ttgcccgccc accacgcaac
     1561 aggcgctgcg atgaggatcg caacacctat tagttgtaag aaattttttg ctatcagcaa
     1621 cgtgatgctg ctgacccttg cgccgagtac tcttctgatg cctatctctt tggtgcgttg
     1681 tactgttgta aatgcagcta gtccaaataa cccgagacaa gcgagtatga tagccaggcc
     1741 tgccgccaca ctgaacaatg cagatgaccg ttgctcagcg agatatagtt tgttatagtc
     1801 ctcatcgaga aaatggtaat tgaacggcct gtcgggaata cgttgtttcc aaaccatctc
     1861 cagccttcca attgttcctt ctatatcatt gccgttgatc cgcaacataa agtcccggga
     1921 aaaatcacga ccaagaaaca tcagcaacgg cccaatcgga tcatgcaggc tgctaaaatt
     1981 gaaatcctta acaacgccca ccaccgggcc aagcgccctg ttctcgacct gccttccgat
     2041 ggcctgctgt ggtgtccatc ctattttttt tgcaagcgtt tcgttgatga tataaggcac
     2101 atgataattc gcgccgttgt ggctggtatc ctgcatcatc gcaaaatccg actgctgaaa
     2161 atcgcggccc gccacaagtt gcatcttcat cgtttttatg aagtcgagat caacaggcat
     2221 tgcattgagt gaaatatcgt gcttaccttt ttcatcgatg gcagttaggc cgtcgcccca
     2281 ttctacgtat tcaggcgttt cgtaggaagc ggtaacagat tccactcctt tcacattggt
     2341 aaacgcgtct ttcaaagttt ggatgttatc gtacatgctt ccgccgatcg gaagcacgac
     2401 aacgtgatct ttatcgtatc caagattctt tgtttgcatg taatgcattt gctgcatgat
     2461 gataaccgta tagatgatca ggaagaccga aataccaaat tgcgcaacga tcagggtctt
     2521 gcgcagcatg ttattgccac ctgtaaaact gaaacctttc ttcagtacac ccatcacctg
     2581 cgtgccggat aaaataatcg cagggtatac accggcaaaa aagcttacaa gcaccgcaaa
     2641 taaaagaaga ga
//
LOCUS       DASQJI010000030         8516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_155663,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000030 DASQJI010000000
VERSION     DASQJI010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8516
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155663"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VEV83_01050"
     CDS             complement(<1..741)
                     /locus_tag="VEV83_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43723.1"
                     /translation="MRGLCLLLSAIAFGQSLGQSVDTIFYSAVKGGTISGEQKSWQAG
                     PNEYHYTYYFNDRGRGSNINAVVRTNDNGFITALNATGFDYYKNPYTENFKIEGDSAV
                     WDVNGDRKAKKFANQCYTSTPAPAIDEITLRWLVKQPGKRADVLPEGFIYTTDPSIYS
                     ISLNAKTASLKLYAIYFDTIAQPIEYLWVSNDMHFFASVSAWMSILRKGYESWADTLF
                     SLQERADKDFYTAQMKKFSSDVPAHVLIM"
     gene            complement(898..1515)
                     /locus_tag="VEV83_01055"
     CDS             complement(898..1515)
                     /locus_tag="VEV83_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43724.1"
                     /translation="MAGKKTSQDLHDSKRDEERLQQDEATLDLPEVKDIPGQENIQVP
                     KMREMRDTTISSADEEGVGVWNSDQPQEDRSDERVGPAQEVDQNDLRMNSNEKKLEAK
                     LDAEELKQTDDLDITDEPTDPEASVTPDEVEALERTENMDTRDNENLYRAELDDTDFE
                     GEKLNEDIEVSGGDLDIPGADLDDPNEDIGEEDEENNLYSLGDNE"
     gene            1817..2407
                     /locus_tag="VEV83_01060"
     CDS             1817..2407
                     /locus_tag="VEV83_01060"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HYK43725.1"
                     /translation="MKKFMSIFFTGCLCAFVACNSGTTSQDSVDSAKDVNDSVMDNND
                     TGANTMATPVSEHDANWAVEVANAGMTEVELSKVAKDKATSPRLKNFADMMVTEHGQA
                     NDQLKQIAATKNITLPANLSDASQKKLDNLNKKTGRDFDKQYMDDMLSDHKDAVDKFQ
                     KATNDLQDPDLKSFAQQVLPKIQVHLDSIKAISGKK"
     gene            2533..3792
                     /locus_tag="VEV83_01065"
     CDS             2533..3792
                     /locus_tag="VEV83_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HYK43726.1"
                     /translation="MDKFLYILFVKLYTPAAFLLSFFNQKAAWWYHGRKGIFDKIKAA
                     IGDDKSEKVWMHCASLGEFEQGRPLLERIKALSPECKLVLTFFSPSGYEVQKNSNSAD
                     YIFYLPIDSKKNASRFLDLVQPTLILFVKYEYWYHYLKESHARKIPMLLVSGIFLPHY
                     SFFQWYGKMRRQMLRFFSHYFVQDERSKQLLASVGITNVDVTGDTRFDRVLKVASERR
                     TFPEIERFISGRKTVVAGSTWLEDDEELDHFANTHPDLRFIIAPHDIGKDRIRECCKL
                     YKSSVLYSTYKNSTASADHSVNTMIVDNIGMLKFLYRHGTVCYVGGGFGRDGIHNILE
                     AAVYYKPVVFGPEYENFSEAIELVKRGGAFDVHDALELEQQLDELLSDEKLYSEASKI
                     SGDYVKESVGATEAIIAYIQENRLLIN"
     gene            complement(3765..4436)
                     /locus_tag="VEV83_01070"
     CDS             complement(3765..4436)
                     /locus_tag="VEV83_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43727.1"
                     /translation="MERVELLIERLLEQYRNNAGTDKLMLTAQLLIAELQKEQRSDDQ
                     FAGQKISVFYPAASHFSSSALKETVEEVVIPQEKKSAPKVKLPEPEPPAPNQRQLFDP
                     LLEIPTLALKQQELNEAMAIKAQSLNDKLKSGTTEIAHTLKDGPIKDLRKAIGINDRY
                     LFINELFRGDEIMYERSIKTINGFHIYGEAEFWIKRELKLKLGWKEDSEAVRVFDQLI
                     KRRFS"
     gene            4502..5077
                     /locus_tag="VEV83_01075"
     CDS             4502..5077
                     /locus_tag="VEV83_01075"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HYK43728.1"
                     /translation="MFVEPHTTGERRGWIEVICGSMFSGKTEELIRRLKRAKMANLST
                     EIFKPAIDDRYHPVHVVSHNENTIPSLAVDTAGSILQAAAGIDVVGIDEAQFFDKEIV
                     KVCESLALQGTRVIVAGLDMDYLGQPFEPVPMLLAIADYVTKLHAICVHCGHIANISY
                     RKTKQTGKIVLGETDIYEPRCRVCYLKGDAL"
     gene            5074..5778
                     /locus_tag="VEV83_01080"
     CDS             5074..5778
                     /locus_tag="VEV83_01080"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYK43729.1"
                     /translation="MRKFVTWLLACIAASSQPKAQSISSFDLLFKNSKQALYVETSSL
                     SAIHGTMKLYERKNEHTEWKLVYSFRVTVGRTGLAKDAENLLRLPDTMPVKHEGDGKS
                     PAGIFQLGAVFSYHDLEKLHMPFVRVDTTDLCVDDENSAYYNTLIRSDSAKHDYKSFE
                     YMKRRDSLYEYGVWVLYNSTPVRRGNGSCIFLHVWRDENSPTAGCTAMSRENILKLIY
                     RLDKKKNPVLVQVVSR"
     gene            5897..8488
                     /gene="mutS"
                     /locus_tag="VEV83_01085"
     CDS             5897..8488
                     /gene="mutS"
                     /locus_tag="VEV83_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HYK43730.1"
                     /translation="MAKPPDDTPLMQQHKAIKQKYPDAILLFRVGDFYETFGSDAITA
                     SHVLGITLTKRNNGTAASSELAGFPHHALDTYLHKLVKAGYRVAICDQLEDPKLAKGI
                     VKRGVTELVTPGIATNEKLLEINSNNFLAGVHFNEDVFGLAFLDISTGEFFVAEGNHE
                     YADKLLQTLKPAEVIYQRSNQKLFKEKFGARFYTYTLEHWIFDEAFATENLLKHFQTH
                     SLKGFGIENLHNGIIAAGAVLHYLKETEHPNLQHITTVQRLEKEDFLWMDRFTIRNLE
                     LLSTGTDQQSSLLTILDNTVSPMGSRLLKRWLLLPLKDSIRINERLDTTEFLILQTDL
                     RKQLQQLTKHCGDIERLVSRIPSKKINPRDVLHLAKGLQYSTQIKQLCSKCSDEYIKR
                     LADALNPCHYICEKIFHEITEVPPVAIHKGGVIKKGVDASLDELRDIASGGKQFLVNI
                     QQREAEETGINTLKIGFNNVFGYYLEVTNSQKAKVPAGWMRKQTLANAERFITPELKE
                     YEEKITGAEEKILTLEAEIYDKLLIELHDYIAPIQNNGSILAVLDCLCCFAQNALQYN
                     YKKPQLHDGLELELKASRHPVIERNLGAGEQYVSNDIFLDPSTQQIIILTGPNMSGKS
                     ALLRQTALITLLTHMGSFVPADEARVPLTDKIFTRVGASDNLSGGESTFMVEMNETAS
                     IINNISQRSLILLDEIGRGTSTYDGISIAWSIAEFLHSAPAAPKTLFATHYHELNELE
                     NKLPRIKNFHVTNKEIGNKIIFLRKLAPGGSTHSFGIHVAKMAGMPPQLIDRANQILK
                     QLEAKQEESLDAGKKIVAPQLQLSIFDAHSQTFGTIRELLDHIDINRLTPVEALMKLN
                     EIKNLLK"
BASE COUNT         2391 a         1911 c         1867 g         2347 t
ORIGIN      
        1 catgatcaaa acatgtgcag gaacatcaga agaaaacttc ttcatctgcg cggtataaaa
       61 atctttatca gcccgctcct gcaaagaaaa taaagtatca gcccatgatt cgtatccttt
      121 cctcagtatc gacatccacg cagaaacgga tgcaaaaaaa tgcatgtcat tcgataccca
      181 taaatattct attggctgcg cgatggtatc aaaatagatc gcatataatt ttaatgaagc
      241 agttttagca ttcaaagaga tcgagtatat ggaagggtct gttgtgtaaa tgaagccttc
      301 cggcagtaca tctgcgcgtt tgccgggctg tttaaccagc caacgtagcg tgatctcgtc
      361 aattgccggt gcaggcgttg aagtgtagca ttgatttgca aacttttttg ctttgcggtc
      421 accgttcaca tcccaaactg cagaatctcc ttcgatctta aaattttcgg tgtacggatt
      481 tttataataa tcgaaccccg ttgcgttgag cgcagttata aacccgttat cgtttgtacg
      541 caccacggcg tttatgttac tacctctgcc acgatcattg aagtagtatg tatagtgata
      601 ttcatttggc ccggcttgcc aggacttttg ctcgccgcta atggtaccgc ctttcaccgc
      661 agagtaaaag atcgtatcaa cagactgacc caaagattga ccgaaggcaa ttgcagacag
      721 tagcaggcat aaccctctca taagtttttg cttcgaatat aagaaggtta agaagagggt
      781 cgattgggaa ttgggattta gccccttggc gtcatccttc ggtagtttct aatttgttta
      841 ttcttgtttc ttgtttcttg tttcttactt cttacttctt atttcttatt tcttggctca
      901 ctcattatct cccaaactgt acagattgtt ttcctcatct tcctctccga tgtcttcatt
      961 tgggtcatcg agatcagcac cgggaatgtc gagatcgccg cccgacacct caatatcttc
     1021 attcaatttt tcaccttcga aatccgtgtc gtccaactca gcgcgatata aattctcatt
     1081 atcccgcgtg tccatgtttt cggttctttc cagcgcttct acttcatcgg gagtcacact
     1141 agcttccgga tcggttggtt cgtctgtgat gtcaaggtca tcggtttgtt ttaattcttc
     1201 agcatccagt ttcgcttcca actttttttc gttgctattc atccgcagat cattttggtc
     1261 cacctcctgc gccgggccga cgcgctcgtc gctccgatcc tcctgcggct gatcactgtt
     1321 ccatacgccg actccttctt catccgcaga agaaatcgtt gtatcacgca tttcgcgcat
     1381 tttgggaacc tggatatttt cctggccggg tatatctttc acctccggca aatctaacgt
     1441 tgcttcatct tgttgtaaac gctcttcatc tcttttggag tcatgtaaat cttgcgaagt
     1501 ttttttgccg gccatgatat tgtttaatgt tatctggtgc taaaacagtg ccatgcgcgg
     1561 cgttgttaaa atttttcacg gtgctgcgtg taaaacgctt ccgtttagaa aatcagggaa
     1621 aataatctac agagtttagg gattgaagat ctatatctta caattttctc tttcagccga
     1681 cagtaggcga aaatcgctga ttccaaattc ataaatccca tttacaactg caatttctct
     1741 aattcggctt ggcatttgtt attatttgat tcgttgctgc acgaaatatt ttataaccta
     1801 taaaactcca tattttatga aaaagttcat gagcatattc ttcacaggct gtctttgtgc
     1861 atttgttgcc tgtaacagcg gtactacttc ccaggacagt gttgacagcg caaaagatgt
     1921 taacgacagc gtgatggaca ataacgatac tggtgccaac acaatggcga cgccagtgtc
     1981 tgagcatgac gccaattggg cagtggaagt tgccaacgct ggtatgaccg aggttgagtt
     2041 gagcaaagtg gctaaagata aagcgacttc tccgcgcctg aagaattttg cggatatgat
     2101 ggtaaccgaa cacggacaag cgaatgatca gcttaaacaa atagctgcca caaaaaatat
     2161 tacgctgccc gcgaacctta gcgatgcttc tcaaaagaaa ctggataatc tgaacaaaaa
     2221 aaccggtaga gattttgaca agcaatacat ggatgatatg ctgagcgatc ataaagacgc
     2281 cgtagacaaa tttcaaaagg cgacgaatga tctgcaggac cctgatttga aaagctttgc
     2341 tcagcaggtt ctaccgaaga tccaggtgca cctcgattct ataaaagcaa tttcaggcaa
     2401 aaaataaagt ttcattcctt taccggaaag gggatgcatt gcgtcccctt ttttatgaat
     2461 atgtttatcc acatcatgaa gacaacatac ttcaactgat cgcttcaaat attctttctt
     2521 tgcgcaggct gcatggataa attcctttat atactttttg taaaacttta tacgcctgcc
     2581 gcttttcttc tctcgttctt caatcaaaaa gctgcatggt ggtatcatgg aagaaaaggg
     2641 atcttcgaca aaataaaagc tgcgattggt gacgataaat ctgagaaagt atggatgcac
     2701 tgcgcttcat tgggcgaatt tgagcaggga cgcccattac tggaacgaat caaagcgctg
     2761 tctccagagt gtaaacttgt acttacattt ttttcaccgt ctggttacga agtgcagaaa
     2821 aatagcaata gtgctgacta catattctac ctgcccatcg attcaaaaaa aaatgcatcg
     2881 cgatttctcg acctcgtgca gccgacactt attttgtttg tgaagtatga atactggtat
     2941 cattatttga aggaatcaca cgcgagaaaa atcccgatgc tgctggtatc cggaattttt
     3001 ttaccgcatt attccttctt ccagtggtac ggaaaaatgc ggaggcagat gcttcgattt
     3061 ttctcgcatt attttgtgca ggatgaacgg tccaaacaac ttttagcgtc ggtgggaata
     3121 acaaacgttg atgtaaccgg cgacacaaga ttcgacaggg tattgaaggt ggcttccgaa
     3181 cgcagaacgt ttcctgagat cgagcggttc atttcaggca ggaaaaccgt cgttgcaggc
     3241 agtacctggc ttgaagacga cgaggaatta gatcattttg cgaacacgca tccggaccta
     3301 cgcttcatca ttgcaccgca tgatataggg aaagaccgca tcagggagtg ctgtaaattg
     3361 tataagtctt ctgtcttgta ttccacttat aaaaattcga ctgcaagtgc agatcattct
     3421 gtgaatacca tgatcgttga caatatcggc atgctcaaat ttctataccg tcatggaacg
     3481 gtctgttatg taggcggtgg atttggccgc gatggcatac acaacatcct tgaagccgcc
     3541 gtgtattaca aaccggttgt gtttggcccg gaatatgaaa atttttcaga ggcgatagag
     3601 cttgtgaaaa gaggcggcgc tttcgacgtg catgatgcgc ttgaactgga acaacaactt
     3661 gacgaacttt tatccgacga aaaactttat tcagaggcga gcaaaatttc aggagattac
     3721 gtgaaagaga gcgtcggagc aacagaagcg atcatcgcat atattcagga gaatcgtctc
     3781 ttgatcaact gatcaaaaac cctcactgcc tcactatctt ctttccatcc caattttaat
     3841 ttcagctcac gcttgatcca aaactcagct tcaccgtaaa tatgaaagcc attgatggtt
     3901 ttaatgctgc gttcatacat gatctcatcg ccgcggaaca gttcattaat gaacaaatag
     3961 cggtcgttga tgccgatcgc cttgcgcaga tcttttatcg gtccatcttt taaggtatgc
     4021 gcgatttctg ttgttccaga ttttagttta tcgttcaggc tttgagcttt tatcgccatc
     4081 gcctcgttca attcctgttg ctttaatgca agcgtcggaa tttctaacag tggatcgaac
     4141 aattggcgtt ggttaggcgc cggaggctct ggttccggaa gtttaacttt cggtgctgat
     4201 tttttttcct gcggaataac aacttcttcc accgtttcct tcaaagcact tgaactaaaa
     4261 tgagaagcag cgggataaaa cactgaaatt ttttgcccgg caaactgatc atcacttcgt
     4321 tgctcttttt gcagttcggc tatcagcaat tgcgctgtca gcattagctt gtctgttcct
     4381 gcgttattgc ggtactgttc aagcaagcgt tcgattaata actccactct ttccatgaga
     4441 tggtttacat ttgaaaatta cgactttaag gttataacgc tgccaacaaa tttttatttt
     4501 gatgttcgta gaaccgcaca caacaggcga acgaagaggc tggatcgagg tgatttgcgg
     4561 ttcgatgttc agcggaaaaa ccgaggagct gatcaggcga ttgaagcgcg cgaaaatggc
     4621 caaccttagc accgaaattt tcaagccagc catagacgat cgctatcatc ctgtgcatgt
     4681 tgtgagccat aatgagaaca cgattccatc gctcgccgtt gacactgcgg gaagcatttt
     4741 acaagcagcc gccggtatag acgtcgttgg aattgatgaa gcgcagtttt tcgataagga
     4801 aatagttaaa gtatgtgaat cccttgcttt gcaaggcaca agggtgatag tagcagggct
     4861 tgacatggat tatcttggcc agccctttga acccgttcct atgttattgg cgatcgcaga
     4921 ttacgttacg aaacttcatg ccatctgcgt gcattgcggt catatcgcca acatttcgta
     4981 ccgaaaaacc aaacagacgg gaaagatcgt tttaggagaa accgatattt atgagccgcg
     5041 ttgccgcgtt tgctatttga aaggagatgc cctatgagaa aatttgtaac ctggctactg
     5101 gcttgtatag ccgcaagttc tcaaccaaag gcccaatcca taagcagttt tgatttgctt
     5161 tttaagaatt caaaacaagc cctctacgtc gaaacttcat cgctctctgc catacatggc
     5221 acaatgaaac tgtatgaaag aaaaaatgag cacacagaat ggaaactcgt ttattcattc
     5281 cgcgtaacgg tcgggcgaac gggactggca aaagacgctg aaaacctttt gcgacttccg
     5341 gatactatgc cggtgaaaca cgaaggcgat ggaaaatctc ccgcaggtat atttcagttg
     5401 ggagccgttt tcagttacca cgatctggaa aaactgcata tgcctttcgt acgggtggac
     5461 acgactgacc tgtgcgtgga cgatgaaaat tcggcgtatt acaacacctt aatccgatcg
     5521 gattctgcaa agcatgacta caaaagcttt gagtacatga agcgaaggga cagcctctac
     5581 gaatacggtg tttgggtgct ttacaacagt actcccgtta gacgcggaaa cggttcctgc
     5641 atttttcttc acgtgtggcg agatgaaaac tcccctactg ccggatgcac tgcaatgtct
     5701 agggaaaata ttttaaaact tatatacagg ttggataaaa agaaaaaccc tgtattggtg
     5761 caggttgtga gcagataagc gacgccagct tacccaattt ctggttggtt tttaaaccgt
     5821 aactttagac tgcgcactta tccacaaatg ccgcaaccaa cgtctatcaa tcaaccccta
     5881 aactaaattt gccggtatgg caaagccgcc cgacgatacg cccttgatgc agcagcacaa
     5941 agccatcaaa caaaaatatc ctgacgcaat cttgctgttt cgggtaggtg atttttatga
     6001 aaccttcggc agcgatgcga ttaccgcttc acatgtgctc gggattacac taaccaaaag
     6061 aaataacggc acagcggcaa gtagtgagct ggcaggtttc ccgcatcatg cactcgacac
     6121 ttacttgcat aaattggtaa aggcgggtta ccgtgtggcg atatgcgatc agctcgaaga
     6181 tcccaaactg gcgaaaggaa ttgtcaaacg cggtgtaacg gaattggtca cacctgggat
     6241 tgccacgaat gaaaaattgc ttgagatcaa cagcaataat tttttagccg gtgttcactt
     6301 taatgaagac gttttcggcc tggcttttct ggatatttca acgggagaat tttttgttgc
     6361 ggaaggaaat catgaatacg ccgacaaatt attgcaaacc ttaaagccgg cagaagtcat
     6421 ctaccagcgc tctaatcaaa aattattcaa ggaaaagttt ggagcccggt tttacaccta
     6481 cacgctcgag cattggatct ttgacgaagc attcgccacc gaaaatcttt taaagcattt
     6541 tcaaactcat tcgctcaaag gttttggaat tgaaaatctg cacaacggca ttatagcagc
     6601 gggcgcagtg ttgcactatt tgaaggagac ggaacatccc aaccttcaac atatcaccac
     6661 tgttcagcgc cttgaaaaag aagatttttt gtggatggac cggtttacga tccggaatct
     6721 tgaactcctg agcaccggaa ccgaccagca aagtagttta ttaacaatcc ttgacaacac
     6781 agtgagtccc atgggatcgc gtttacttaa acgctggctt ttgctgccat taaaagattc
     6841 cattagaata aacgaaaggc tggacacaac ggagtttctc attttgcaaa ccgacctccg
     6901 caaacaactg caacagttga caaaacattg cggagatata gagagattgg taagcaggat
     6961 cccgtcgaaa aaaataaacc cgagagatgt gctgcatctt gcgaaaggcc ttcaatattc
     7021 aacgcagata aagcaactat gtagtaaatg ttcggatgaa tatatcaaac ggcttgctga
     7081 cgctcttaat ccgtgccact atatctgcga aaaaattttt cacgaaataa ccgaagtgcc
     7141 tcctgttgcg atccataaag gcggggtaat aaaaaaggga gttgacgctt cgctggatga
     7201 attgcgagat attgccagtg gcggcaaaca gtttctcgtg aatattcagc agcgggaagc
     7261 cgaggaaacc ggcatcaaca ctttgaaaat tggtttcaac aatgtcttcg gttattacct
     7321 cgaagtaacg aattcacaga aagcaaaggt tcctgctgga tggatgcgca agcaaacact
     7381 cgcaaacgcc gagcgattta taacgccgga attgaaagag tacgaagaaa agatcaccgg
     7441 tgctgaggaa aaaatattga cactcgaagc ggagatctac gacaagctgc tcatagaact
     7501 gcacgattat attgcgccga tccaaaacaa cggaagcatc cttgcggtac tcgattgttt
     7561 gtgttgcttc gcacaaaatg cccttcaata caactataaa aaaccacagt tacacgacgg
     7621 ccttgaactt gaattaaaag caagccgtca tccagtgatc gaacgtaatc tcggtgcagg
     7681 tgagcagtat gtttccaatg acattttcct ggacccgtcc actcagcaga tcataattct
     7741 taccggtccg aacatgagtg gtaaaagtgc cctgctgcga caaacggcgc ttatcacttt
     7801 gcttacacac atgggcagct ttgtacccgc tgatgaggcg cgcgtgcccc ttactgacaa
     7861 aatatttacg cgtgttggtg cgagcgataa tttaagcgga ggcgaaagta cttttatggt
     7921 ggagatgaat gagaccgcca gcatcatcaa taatatttcg caacgcagtt tgatcctgct
     7981 tgatgagatc ggccgtggca cctcaactta tgatggcatc tcaattgcat ggagcatcgc
     8041 ggaattttta cactctgctc ccgctgcgcc caagacgcta tttgccacgc actatcatga
     8101 actgaatgaa ctagagaata aattgccccg gataaaaaat ttccatgtca ccaacaagga
     8161 aatcggcaac aagatcattt tcctgagaaa gcttgcgccc ggtggcagca cacatagctt
     8221 tggtattcac gttgcaaaaa tggccggtat gccgccacag ttaatcgacc gtgcaaacca
     8281 gatattgaaa cagctcgaag caaagcagga agaaagcctt gatgccggga aaaagatcgt
     8341 ggcgccccaa ctacagcttt ccattttcga tgcacattca caaacgttcg gcacgatacg
     8401 cgagctctta gaccatatcg acattaatcg gcttacgccc gtcgaggcat tgatgaagtt
     8461 gaatgagatc aaaaatttgc tgaagtgata tgtatgcttg caattcctgt tgattg
//
LOCUS       DASQJI010000031         9546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_770095,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000031 DASQJI010000000
VERSION     DASQJI010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9546
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770095"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VEV83_01090"
     CDS             complement(<1..725)
                     /locus_tag="VEV83_01090"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK43731.1"
                     /translation="MKKFIKFITENMRQVLLIVVVCTSGGVMAQRGTQPPEEFGNIKK
                     SVNLTSSSQYIGAKKDYTQNACGFYPASGVRVQAISTTYGGNGCATVITSGSSTVYFT
                     AKDKVILLPGFIAREGSHFIACVEACSSGLVPPTQAMSDARKDIKTSVALEAGISQEA
                     ALANAKTDESITVAPNPFSGSFVLSINANKYGRARVAIYNSFGGMVKELQQVNLVKGF
                     NNLSFNGSNFASGVYMLEVNFGDS"
     gene            complement(751..1866)
                     /locus_tag="VEV83_01095"
     CDS             complement(751..1866)
                     /locus_tag="VEV83_01095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43732.1"
                     /translation="MKKKLSLGLAVALILCSLQKTHAQNWKIGGNIVSSDTTFGTQNS
                     FDLEFITNNATRMTIVKNGRVSIGTGSFNKAKITTDGTVGNTMALFGNTLHGISLVND
                     IPTIGFNNYYSGGWKTLNNGYSGWIAVDNTTGNMQFATCPSALAGVAVAPSVRMLIAE
                     NGNVGIGTTSPGSLLHVAGNQTLAGNLTFTNGTQSIQFANPGVAPAPMIFMFTSGTTN
                     ASRMIIAHSPGFPTWGLQYTDAGDQFDFLGAGTSRMSINLSNGNVGIGVASPAYRLEV
                     CGTIRAKEVRVETGWCDYVFEKDYQLRSIDELEKFITNNKHLPGIAPASEVEKDGLKV
                     AEMNKAMMEKIEELTLYVIQLSKDNKKLQEEINALKK"
     gene            1937..2515
                     /locus_tag="VEV83_01100"
     CDS             1937..2515
                     /locus_tag="VEV83_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43733.1"
                     /translation="MSYHYRVTTKWHATFEWCSFGFSSLSLDVWPPFINERCVVCVHP
                     PAKKIAFLNFFKVKTLDQLKFRRPVSFCRITVEVLNQESCIFKKASTNIDHFIALNRL
                     NVQLKNKKHSGNNSYAISDVKALSPTGRHLPVYKKAIATSRSHAAAILLPEQNIRKTI
                     ISIICLHRNRPRKSTATFALETCAFEFAFSPF"
     gene            2695..3939
                     /locus_tag="VEV83_01105"
     CDS             2695..3939
                     /locus_tag="VEV83_01105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43734.1"
                     /translation="MKNDILLHIDNPRQLEKLYRHNKSGFKQQFNMIYPELKENKIAD
                     FWNERLNYESEDLYWGTTRDISFVIIASILAGIIAKLPAFFHLDQEYFYQRNIGFIVF
                     PILSLYFAWRNKLKTKAIVFIIVAILVCLLFINLLPDQKGSDSLLLSCIHLPLFLWCI
                     LCYAFVGGSLSNYEGRLDFLRYNGNLAVMMALIVIAGGILTGATIGLFSLIDLDIKEF
                     YFENVVICAAATIPIIGTYLTETNPQIVNKVSPLIAKIFSPLVLVTLAAYLAAIVISG
                     KDLYNDREFLMTFNGLLIGVMAIIFFSVAGTSTPTKNYPETLILFVLSILTLIVNGIA
                     LSAIVFRISAWGITPNRIAVLGGNILMLTNLIFITIRLLKALRRKNDKTEVGAAIASF
                     LPVYAIWVFFVTFFLPLIFNFK"
     gene            4692..5546
                     /locus_tag="VEV83_01110"
     CDS             4692..5546
                     /locus_tag="VEV83_01110"
                     /inference="COORDINATES: protein motif:HMM:NF012486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosinase family protein"
                     /protein_id="HYK43735.1"
                     /translation="MKKQTNRAESSKKNGKMRMTENSKFEELLNENLRTVSRSPMTFA
                     KMMEMDKSLASMISKWHWFFPPMCHRKDQATLTEIEKQRYICAFNMVNNDGTLGQMVE
                     THNIVFGQHGSTLLLPWHRIFLLLFEEALHNYHPDVCIPYWDWTNPSEQHFPDWLSGI
                     LPTVHTPTRTINVIRGLHDDSALSATVSGTASAMSQTTYDTFTTPINGIHGGVHIWVG
                     GTMGTYDSPADPVFWLHHANLDRLWWMWYNSAAGNHQNPAIAGTINPWTYTEPDTRNI
                     ITLGYNYV"
     gene            5642..7894
                     /locus_tag="VEV83_01115"
     CDS             5642..7894
                     /locus_tag="VEV83_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43736.1"
                     /translation="MASKKSKLSSLTVRLSENAGVKKSDNLHAYVVNAQGKVVASIPF
                     DGREASISDKHLPPDGSEKIYLAPGLPSGLTLTDLTERDLLKASAYRPTASFTDKRLI
                     DVAHIPASALRPLYLNWCLIKGHIHKSFFIDGEWKDLSLCNMRVHVCEVETEFLLPHL
                     PIYYRRIPDWVIVEVAEKIKGLQQQVNPLPVPVPNPIGPVSMQKFNLPLRSLGMNKSV
                     ETRSAKMPAVSALPDHVSKAISTTSVNDLRAAFSQHHQILYPYFCLWPIYWPWFYFLE
                     EDPDDIVYTDCDGNFELWENLLFEDGPLNIYIWVEACINHVWQTVYRPPIPCNTWWNY
                     HCNTNIDINITDSRVMPCTCDDQLQGEIVWFKSVGWGATALHVEQVDANTVTVANGTH
                     TATMLNVGCTDIIDSHRISPFGGMLGLRILFGDGLPAGNITHYRWTQTKIKDANLTSI
                     LSPVTSVIGGQINKGYYVITNVGGVYHFETHSAVLGAEGSGDNIGYRIPQWDVYSDPG
                     VAAADKVFTLQWTSPDFFGAWIDSNSLSDGLYRFDLELLSKDASGVFHVVPVPRTVFQ
                     VSEYSNSGNSEPAPDAYINLAGSNARNLTIKLRVDNAPCHADIHDVELVDAAGNPVID
                     AVTGLPVKSGKCGFIKYTDISQKARISFEATQPRNFATFGFGVVKGNGSESTGVAADR
                     YVVTSAADFTLIAGVYTQNVPITQLLGSCPGQAAFAENLNVYALATDGSNRLQYGYDA
                     GDTNAFALSN"
     gene            complement(8464..>9546)
                     /locus_tag="VEV83_01120"
     CDS             complement(8464..>9546)
                     /locus_tag="VEV83_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HYK43737.1"
                     /translation="YGVTHMNEVVEFFKNENSLKPVVVNTREEFFDSQQQFDVDFNDV
                     KGQENIKRALEIAAAGGHNAILIGPPGAGKTMLARRLPTILPPLSLYEALETTKIHSV
                     AGKLPENSSLISKRPFRSPHHTISDVALVGGGGIPQPGEISLAHNGVLFLDELPEFKR
                     TVLEVMRQPMEERRVSISRAKVAVDFPASFMLIASMNPCPCGFYNHPERECTCPPGAV
                     QKYLNRISGPLLDRIDLHVEVTPVAFSELSNMKSKGECSASIRERVIKARDIQTERYK
                     EIEGMYCNAQMSSKQLREICVINQAGENLLKRSMEKLNLSARAYDRILKVSRTVADLA
                     GSDDIKVEHLAEAIHYRSLDREGWAG"
BASE COUNT         2584 a         2191 c         2037 g         2734 t
ORIGIN      
        1 gaatcaccaa aatttacctc gagcatataa acacccgatg caaagttgga gccgttaaat
       61 gaaaggttgt tgaaaccttt tacaagattt acttgttgta gttcttttac cattcctcca
      121 aaagagttat aaatagcaac ccgcgctctg ccatatttgt ttgcattgat ggataataca
      181 aaggatccac taaaaggatt aggtgctacg gtaatgcttt catcggtttt tgcatttgcc
      241 aacgcagctt cctgcgaaat acccgcttca agtgcaaccg aagtttttat atcttttctc
      301 gcgtcactca ttgcctgcgt cggaggaact aacccactgg agcatgcttc aacgcaggca
      361 atgaaatgtg agccctctcg agctataaaa ccaggaagaa ggatcacttt atcctttgcg
      421 gtaaaatata cagtgcttga accggatgta atgaccgtcg cgcaaccgtt gccaccataa
      481 gttgttgata ttgcctgtac gcgaactccg gaagcagggt aaaagccaca ggcattttga
      541 gtatagtcct tttttgcacc aatatattgt gatgaggaag tcaggtttac cgactttttg
      601 atattcccga attcttcagg gggttgtgta ccgcgctgcg ccatcacacc gcctgaagta
      661 catacgacta ctatgagcag cacctgccgc atgttttcag tgataaattt tataaacttt
      721 ttcatgtcaa ttctttttag attgtcaaac ttatttcttc aatgcattaa tttcttcctg
      781 caactttttg ttatccttgc ttaactgaat aacatacagt gtaagttctt caatcttctc
      841 catcatagcc ttattcattt ccgccacttt caaaccgtcc ttttccactt cgcttgccgg
      901 cgcaataccc ggtaaatgct tattgttagt aataaatttt tctaattcat caattgatct
      961 caactgataa tctttttcaa atacataatc gcaccaaccg gtttccacac gtacctcttt
     1021 tgcacgtatg gttccgcata cttctaatct atatgccgga cttgcaacac caatgcctac
     1081 attgccattt gacagattga tagacatcct gcttgtgcca gcgcccaaaa agtcaaattg
     1141 gtcaccggca tcggtgtact gtaaacccca ggtaggaaaa ccaggtgaat gtgcaatgat
     1201 catgcggctc gcatttgttg taccagacgt aaacataaag atcatgggag ccggtgcaac
     1261 gccgggattt gcgaactgaa tggattgcgt accattggtg aaagtaagat tgccggctag
     1321 tgtttggtta cccgcaacat gcaacaagga accgggactg gtagtgccga tgcctacatt
     1381 accattttcc gcgatcagca tgcgtacgga tggagcaaca gcaacgcccg ccagggcgct
     1441 aggacaggtt gcgaactgca tattccccgt ggtattatca actgcaatcc atccactgta
     1501 accgttatta agtgttttcc atccaccact gtaatagtta ttaaagccaa ttgtgggaat
     1561 gtcattcact aaagaaatgc catgtaaggt gttgccaaac aacgccatcg tattacctac
     1621 tgttccatcg gtggtaattt ttgctttgtt gaaggaacca gttccgatag aaactctgcc
     1681 attctttact atggtcatcc tggtagcatt gtttgtgatg aactctaaat cgaaactgtt
     1741 ctgtgttccg aatgtggtat cgcttgaaac gatattgccc ccgatcttcc aattctgggc
     1801 atgtgttttt tgcaggctgc acagtattaa tgcaactgct aatccaagag ataatttttt
     1861 tttcatgaga attgtttttg gatgtttatg agatgatcgc ttgttctctt aacagctttg
     1921 agcattcgaa ttataaatgt cttaccatta tcgggtaaca actaagtggc atgcgacttt
     1981 tgaatggtgt tccttcggtt tctcatcact gtctcttgat gtctggccgc cttttataaa
     2041 tgaacgttgt gtagtttgcg ttcaccctcc tgcaaaaaaa attgcctttc taaatttctt
     2101 taaggtaaaa actctggatc aacttaaatt tcgtcgtccc gtcagctttt gtcgtataac
     2161 cgttgaggta ttgaatcagg aatcgtgcat ctttaaaaag gcttcaacaa atatagacca
     2221 ttttattgct cttaatcgat tgaacgtgca gcttaaaaac aaaaagcaca gcggaaacaa
     2281 ttcctacgcg attagcgatg tcaaggcgct gtctcccacg ggtcggcatt tgccagtata
     2341 caaaaaagca attgctacgt cgcgttcaca tgctgctgcg attcttctgc cggaacaaaa
     2401 tatccgtaaa acaattattt caataatatg tctgcatcgt aaccggccgc gcaaatcaac
     2461 cgccaccttt gcccttgaaa cttgcgcatt tgaatttgct ttttcgccct tttagaattg
     2521 tacataaaaa agtttacatc aatcattgga tttctaaaga acttacgttt actttgtatt
     2581 tcaaagcact tcgtacgcag aagcgccgaa tgaagtgtga aggactcgtc ggctttggct
     2641 aatcatacag tcctatatga aagaaaatta tcaagaaata ctataacgat ttttatgaaa
     2701 aatgatatcc tgttacacat tgacaacccc cgccagcttg agaagttgta caggcacaac
     2761 aagtcgggtt tcaaacaaca gtttaatatg atttaccctg aactgaagga gaacaaaatt
     2821 gccgatttct ggaatgaaag acttaactac gaaagtgagg acctgtattg gggaacgacc
     2881 agggacatat cctttgtcat catcgcttct attctcgcag gcattattgc aaagctccct
     2941 gcattttttc acctcgacca agagtatttt taccagagaa acattggttt catagtcttc
     3001 ccaatactga gcttgtactt cgcgtggaga aacaagttaa aaactaaagc aattgttttt
     3061 ataatcgtcg caatactcgt ttgtttgctt ttcataaact tgcttccaga tcagaaggga
     3121 agcgacagtt tgcttttatc gtgcatacac ttaccattat ttctgtggtg tatcttatgt
     3181 tatgcttttg ttggcggaag cttaagcaat tatgaaggcc gactcgattt tttaagatac
     3241 aatgggaacc tcgctgtaat gatggctctt atagtaatcg cagggggtat cttaacaggt
     3301 gccacaatcg gccttttctc cctcatcgat ctggacatta aagaattcta ttttgaaaat
     3361 gtggtgattt gtgctgctgc gacaataccg ataataggca cttatcttac agaaacaaat
     3421 cctcaaattg taaataaagt ttcaccccta atcgcaaaaa tatttagtcc gcttgtcctg
     3481 gtaaccctgg cagcttacct ggcagccatt gttatctcgg ggaaggacct ttacaatgac
     3541 agggaatttc ttatgacgtt caacggcctg ctgattggag ttatggctat tatattcttt
     3601 tctgtcgcag gtacgtccac gcctacaaaa aattatccag aaactttaat tcttttcgtg
     3661 ctatcgattc ttactttaat tgtaaatgga attgctttat ccgcaattgt atttagaatc
     3721 tcagcgtggg gcattactcc caacagaatt gcggtgcttg gaggaaatat attaatgttg
     3781 acgaacttaa tttttataac aataagactg ctcaaagcat taagaaggaa gaatgataaa
     3841 acagaagtgg gggctgcaat cgcatcattt cttcctgtct acgctatatg ggtgttcttt
     3901 gttacttttt tccttccatt gattttcaac tttaaataat gaagcgtttg gctgagctgt
     3961 attgcaatta gattctgtca aacatttcac ttttatatca tcaggcgccg cgtggtctgc
     4021 aagggttcgg ccagtctgaa tgtttgcacc gaagaacgct cctttgtaac attacaatac
     4081 atgccctcaa tttctttgta acgttccgtt tgtatatctc gtgctttaat aacaagttct
     4141 cggattgatg gagaacatcg cgtttcgatt tcaaattgct cagctcactg aatgcaacag
     4201 gagtaactgc aacatgcata tcaatcctgg caaacaaatg gtccagggat gttgttgaaa
     4261 tatttttgta ctgcaccagc tagacgataa gtagtgcatt atgccctccc gccgctgcaa
     4321 ttcaagtgcg cctttatatt ttcctcccct ttcacatcat ttaatttacg tcgaactgct
     4381 gctgtgcatc aaaatttatt tggaaaaaac aaaaaatgat ttatcttact cgtgaattga
     4441 ttgcttcaat tgctcttctt gattttgtta cccaactagt aaaacttcgt cgctgacctg
     4501 attttaatta accctttcct cgtgggtatt atccatcgtt catcgtccgc ttgagcccgg
     4561 gaaaggatct aaaaaggcag atggagagga gaggtttctg gaaacaaatc tttggcagga
     4621 acctaaagat ccatgaagga gtacgcgcct gtatcgtggc ctgaaacgac caacaaaaaa
     4681 ttataaatca aatgaaaaaa caaacaaaca gggcagagtc atcaaagaaa aacggcaaaa
     4741 tgcgaatgac tgagaactca aagtttgaag aactattaaa tgagaatctt cgaactgttt
     4801 ctcgttcgcc aatgacgttt gcaaagatga tggagatgga caaatcactt gcttccatga
     4861 ttagtaaatg gcattggttt tttcctccca tgtgccatcg taaggaccag gcaacgctta
     4921 ctgagatcga gaagcagcga tacatctgtg catttaatat ggtaaataat gatggcacgc
     4981 ttgggcaaat ggtggaaacg cataacattg ttttcggcca gcacggcagc accctgcttc
     5041 ttccatggca tcgcatcttc ctgctcttgt ttgaggaagc cttacataat tatcaccctg
     5101 atgtttgcat accttattgg gattggacaa acccatctga gcaacatttc cctgattggc
     5161 tttccggaat tcttcccacg gttcatacac ctacacgcac aataaatgta attcggggat
     5221 tgcatgatga cagcgctctc agcgcaacgg tctcaggaac tgcatcggca atgtctcaaa
     5281 ccacttatga tacattcacc actcccatca acggcataca cggcggagtt catatatggg
     5341 ttggaggaac gatgggcact tacgattcac ctgctgatcc tgtattctgg ttgcatcacg
     5401 ccaatcttga tcggctatgg tggatgtggt acaatagtgc agcaggaaat catcaaaacc
     5461 cggctatcgc tggcactata aacccatgga catatacaga gcctgatacc agaaacatta
     5521 ttaccctggg atataattat gtataacagt ccgaaaaagg gaggaagctg aaaatccgtt
     5581 taaaagagta agcgcccgga tgccgaaaag ggtttcagag taggcggaaa aaacataagc
     5641 aatggcaagt aaaaaaagta agttatcctc actcacggtg cggctttcag aaaatgccgg
     5701 tgtgaaaaaa tcagacaacc tgcatgcata cgtggtaaat gctcagggta aggtggtagc
     5761 atcaattccg tttgatggca gggaggccag catcagcgat aagcatcttc ctccggatgg
     5821 ttctgaaaag atttatctcg caccaggtct tccttccggg ctaacactca ctgacctgac
     5881 tgagcgcgat ctgctgaaag catcggcgta ccgtcccacc gccagcttca ctgacaagcg
     5941 gctcattgat gtggcgcaca ttcccgcttc tgcactgcgc ccgttgtacc tgaactggtg
     6001 ccttatcaaa ggtcatattc acaaaagctt tttcattgat ggcgagtgga aagacctttc
     6061 gctctgcaac atgcgtgtgc atgtgtgcga ggtggaaacc gaattcctac tgcctcatct
     6121 gcctatttat tacaggcgta taccggattg ggtaattgtg gaggtggcgg aaaaaattaa
     6181 agggcttcag cagcaggtga atcctttgcc tgttcctgtt cctaatccaa ttggcccggt
     6241 gagcatgcag aagtttaatt tgccgctgcg ttcactgggg atgaacaaga gtgttgaaac
     6301 acgttctgca aaaatgccgg cagtgagcgc attgccggat catgtgtcga aggcgatcag
     6361 caccacgtcg gtgaatgatc ttcgtgctgc attctcacaa caccaccaaa ttctttatcc
     6421 gtacttctgc ctttggccta tttactggcc atggttttat ttcctggaag aggatcctga
     6481 cgacattgtt tataccgatt gtgatggcaa ctttgagctg tgggaaaatc ttctgttcga
     6541 agatggaccg ctcaacatct acatctgggt agaagcgtgc atcaaccacg tctggcaaac
     6601 cgtttatcgc ccacccattc cttgcaacac ctggtggaat tatcactgca acaccaacat
     6661 tgacatcaac attacagatt cgcgcgtgat gccgtgcact tgcgacgatc agttgcaggg
     6721 tgaaatcgtt tggttcaaat cagtggggtg gggtgcaact gcattgcacg tggagcaggt
     6781 tgacgcaaac actgttaccg ttgcaaatgg cacgcacacg gcaactatgc tcaacgtggg
     6841 gtgtaccgac attattgact cacaccgcat cagcccattt ggaggcatgc ttggtttgag
     6901 aatcttgttt ggcgatggcc tgcctgcagg aaacatcacg cattaccgct ggacgcaaac
     6961 gaaaataaaa gatgccaacc tgacttctat cctgtccccg gttacctcgg tgattggagg
     7021 tcagatcaac aagggctatt atgtaatcac caatgtgggt ggggtgtatc attttgaaac
     7081 gcactcggcc gtacttggcg ctgaaggcag cggcgacaac attggctacc gcattcctca
     7141 atgggatgtg tacagcgatc cgggtgttgc cgcggcagat aaagtattca ccctgcagtg
     7201 gacaagcccc gatttcttcg gtgcatggat tgacagcaac tcgctttccg acggcttgta
     7261 tcgttttgat ctcgaattgc tgagcaaaga tgcgtcaggc gtgtttcatg tggttccggt
     7321 tccgcgaaca gtgttccagg tctcggagta ttccaactcc ggtaacagcg aacccgcacc
     7381 cgatgcatac atcaatcttg caggcagtaa cgctcgcaac ctcaccatca agcttcgcgt
     7441 tgacaatgca ccctgccatg cggacatcca cgatgtagag ttggtcgatg cagcagggaa
     7501 cccggtgatt gatgctgtga cggggctgcc agtgaagagt ggcaaatgcg gattcattaa
     7561 gtacactgat atttcgcaaa aggcgcgcat cagctttgaa gcaacgcagc cacgcaattt
     7621 cgccacattt ggttttggcg tcgtgaaggg gaatggcagt gaatccacgg gagtagcagc
     7681 ggaccgttat gtggtcacca gtgcagccga ttttacgctc atcgctggcg tgtatactca
     7741 gaatgttccg attacacaat tgctcggcag ctgcccgggt caggcggcat ttgcagagaa
     7801 cctgaatgtc tatgctcttg caaccgacgg cagcaatcgt ttacaatacg gttacgatgc
     7861 aggcgacacg aatgcatttg cattgagtaa ttagaccctt ttcactcctc ctgttcgcca
     7921 ggcgcgaaag gcgacaggag gagtttttga acaacgaatt ggaggaagtc gcttcacgtg
     7981 cgggattatg gcgtgatata aggacattca ggctgaaata aaatgtgcat gtgaattaat
     8041 ttattttcaa ccattctgcc cgtgaagtga acaccaaaaa ttcaattaac atgtcgacga
     8101 ctgatttcct ttggtttgat aataactttc gaggagtctc ttgtggccaa aagaattttt
     8161 tattttgatt caattttgag actgagcgga cgggcaggta tcgagttaat agcagcaacg
     8221 cggtaaaata caacctgtgc tggtctttaa gtttgtagtc tctggtcaag aaactttttg
     8281 agttaacagt tgaaaatgtc tactagcaca agtacccatc ccacattacc ggcctgcata
     8341 cttgccacaa atccggaaac ggtaattgag cttctacaaa cccgttcaac gaccggcaca
     8401 gaagcgaccg cagccttccg gtcgggcagg cattcacaac tcacaattgc gaattcccca
     8461 ttctcatccc gcccaaccct ccctatccaa acttcgatag tgaatggcct ctgctagatg
     8521 ttcgacttta atatcatcac ttcctgccag atcggccaca gtgcggctga ctttcaaaat
     8581 gcgatcataa gcgcgtgcag ataaattcaa tttttccatt gaacgtttca ataaattttc
     8641 gccggcctgg tttattacac aaatttctct gagctgtttg ctgctcattt gcgcattgca
     8701 atacatgccc tcaatttctt tgtagcgttc ggtttgtata tctcgtgcct taataacgcg
     8761 ttcccggatt gatgcagaac attcgccttt cgatttcatg ttgctcaact cgctaaatgc
     8821 aacaggtgta acttcaacat gcaaatcgat cctgtcgagt aacggacccg atatcctgtt
     8881 caaatatttt tgtactgcgc cgggtggaca cgtgcattca cgttcgggat gattgtagaa
     8941 gccgcagggg cacggattca tactagctat caacataaaa cttgcgggaa aatcaactgc
     9001 aacttttgct ctcgaaatac taactcttcg ttcttccatc ggctgacgca tcacttcgag
     9061 aactgtacgt ttgaattccg gcaattcatc caaaaacaaa acaccattgt gtgctaaaga
     9121 aatttcaccc ggctgcggaa ttccacctcc gccaaccagt gccacatcgc tgatcgtatg
     9181 atgtggcgag cggaaaggcc tcttactgat cagcgaacta ttttcaggca acttgcctgc
     9241 cacactgtga atctttgtcg tttctaaagc ctcatataaa ctcagcggcg gaagaatagt
     9301 tggcaatctc cgcgcaagca tggtttttcc cgcccccggc ggaccaataa gtattgcatt
     9361 atgcccaccg gccgctgcga tttcaagtgc acgtttaata ttttcctgtc ctttcacatc
     9421 attgaaatcg acatcgaact gctgctgtga atcaaaaaac tcttcgcgcg tatttacgac
     9481 gactggctta agcgaatttt catttttaaa aaattcaacc acttcattca tatgcgtgac
     9541 gccgta
//
LOCUS       DASQJI010000032         5282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1077084,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000032 DASQJI010000000
VERSION     DASQJI010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5282
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077084"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VEV83_01125"
     CDS             <1..188
                     /locus_tag="VEV83_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43738.1"
                     /translation="LFRSENFFVSHLSAPEEPPVYKKPGNVSCGSIGASFIKVIDGKE
                     RPVQGSPGERILTSECG"
     gene            complement(226..1227)
                     /locus_tag="VEV83_01130"
     CDS             complement(226..1227)
                     /locus_tag="VEV83_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HYK43739.1"
                     /translation="MFIVHSYSLAVVFCIITMLCWGSWANTQKLASKTWRFELFYWDY
                     VIGILLFSLVAAHTLGSMGTEGRNTTDDLHQASTANVLSAFIGGIIFNAANILFSAAI
                     AIAGMAVAFPLAIGLALVLGVMVNYFAAQKGDPVLLFAGVACVAVAIIINAIAYKKKS
                     GSEQKVSTKGIVLSLVAGLLMSFFYRFIAASMDLENFENPAAGKMTPYTAVFIFSVGI
                     FVSNFLFNTILMKKPFDGPAVTYKQYFKGRFATHMVGVLGGLIWGLGNSLNLIAAGKA
                     GPAISYGLGQGATLVAALWGVFIWKEFTNAPKGTNSLITAMFLFFIVGLGLIIYAGR"
     gene            complement(1274..2191)
                     /gene="rbsK"
                     /locus_tag="VEV83_01135"
     CDS             complement(1274..2191)
                     /gene="rbsK"
                     /locus_tag="VEV83_01135"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004747 - ribokinase activity [Evidence
                     IEA];
                     GO_process: GO:0019303 - D-ribose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HYK43740.1"
                     /translation="MKSSIVIVGSSNTDMVIKTSHLPALGETVLGGTFFMNAGGKGAN
                     QAVAAARLGGNVVFIAKTGDDIFGTQAVELFQSEGIDTSCIVTDHRHPSGVALITVDA
                     HGENCIVVAPGANAALTANDLKHALPKLDAASIILMQLEIPVDTVSYVAAIAAERKIQ
                     LVLNPAPACKLPDQLLRHVSVITPNQKEAEMLTGVKVTNIATAEQAATFLNAKGIKTV
                     IITMGKQGALLLHEGNCKMITAPKVQAVDTTAAGDIFNGALVVALSENKSMEDAVRFA
                     CKAAAISVMRLGAQASAPYRNEVMQTSIR"
     gene            complement(2748..3338)
                     /locus_tag="VEV83_01140"
     CDS             complement(2748..3338)
                     /locus_tag="VEV83_01140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HYK43741.1"
                     /translation="MAESNHLFPIFLKLEELNLLIVGGGNVALEKLNAVLSNSPKTNI
                     RLVAREISDSIKTLVAGRTNIELLEQAYQSSHLENIHLVIAAVNDVSLAEQILNDAHH
                     RNLLVNVADKPSLCDFYLSSVVQKGNLKLAISTNGKSPTIAKRLREIFSELLPEEIDE
                     VLDNMQQIRNTLKGDFAEKVARLNEMTKTFLAGKQQ"
     gene            complement(3346..4635)
                     /gene="hemL"
                     /locus_tag="VEV83_01145"
     CDS             complement(3346..4635)
                     /gene="hemL"
                     /locus_tag="VEV83_01145"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HYK43742.1"
                     /translation="MNISTSISLFSRAQQAIPGGVNSPVRAFKSVGGTPVFIKNAMGA
                     YLYDADDNKYIDFVNSWGPMILGHAFGPVVEAIQRKVLDSTSFGAPTELEIEIAELIK
                     SMVPNVDLIRMVNSGTEACMSAIRLARGFTGRNKIIKFDGCYHGHADSFLVKAGSGLA
                     TFNIQTVPGVTAGVAVDTLTAPYNDLDAVRNLIAEHKNEIAAIIIEPVAGNMGCILPQ
                     NGFLEGLRKLCDEENIIYIFDEVMTGFRLSPGGAQERLRIDADLVTYGKVIGAGMPVG
                     AFGGKLEIMKHIAPLGNVYQAGTLSGNPLAMIAGFTLLSYLKNHPSVYEELETKGHYL
                     RSGLQKVFQQSGIAFVINHMGSMISVHFSGQPVVDFASASSANNGLFSKFFHAMLDSG
                     IYLPPSAFESWFLSNALSYADLDFTIEAAGNALKYLA"
     gene            complement(4691..5041)
                     /locus_tag="VEV83_01150"
     CDS             complement(4691..5041)
                     /locus_tag="VEV83_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK43743.1"
                     /translation="MFLELAHTKLPIFQLSQKLAMESYAITKCFPSEERYAMIQQIRR
                     AALSTHLNIAEGCSRKSLVERRRYFEIARGSVIEIDAALDIAVKLRYCSLEHLKELGE
                     AIVNTFKQLTGLMN"
     gene            complement(5136..5273)
                     /locus_tag="VEV83_01155"
     CDS             complement(5136..5273)
                     /locus_tag="VEV83_01155"
                     /inference="COORDINATES: protein motif:HMM:NF012702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43744.1"
                     /translation="MIKAAAKMGWIDESKAIMETLTSIKRAGASLIATYFAKEAASMM
                     G"
BASE COUNT         1435 a         1250 c         1142 g         1455 t
ORIGIN      
        1 acttatttcg ctcggaaaat ttttttgtgt cgcatctgtc ggctccagag gagccacctg
       61 tttataaaaa accgggaaac gtttcttgtg gctccatcgg agcctccttt ataaaagtca
      121 tcgatggtaa agagaggccg gttcaagggt cgcctggcga aaggattttg acgagtgaat
      181 gtggctagcc atgtcattaa ataaatgcgt gatacaacga gacagttatc gtcccgcata
      241 aataatcaac cccagcccaa caataaagaa caaaaacatc gcggtgatca aactgttcgt
      301 gccttttggg gcgttcgtaa actccttcca gatgaagacg ccccacagcg cggcaacgag
      361 cgttgcgccc tgcccaagtc catatgaaat cgcaggaccc gccttacctg cggctataag
      421 gttaagagaa ttacccaatc cccagatcaa accgcccagc acaccgacca tatgagttgc
      481 aaatcttcct ttaaaatact gcttgtatgt aacggccgga ccatcaaaag gttttttcat
      541 gaggatggta ttgaataaaa aattgctgac aaaaattcca accgaaaaga taaatacagc
      601 agtataaggc gtcatctttc cggctgcagg gttttcaaaa ttttctaggt ccattgaagc
      661 tgcgataaaa cgataaaaaa aggacatcag caatcctgca acaagtgaaa gaacaatgcc
      721 cttcgtcgaa actttttgtt cactgccgct tttcttttta taagcgatcg cattgatgat
      781 gatcgccact gcgacgcacg cgacaccggc aaagagtaaa acaggatcgc ctttttgagc
      841 tgcaaaataa ttgaccatga cgcccagtac cagtgctaat ccaatcgcaa gagggaatgc
      901 aacggccatg ccagcgatcg cgatagcagc agagaacaaa atattcgccg cattgaaaat
      961 tattcctcca ataaaagcgc tcaacacatt tgccgtgctc gcctggtgaa gatcgtctgt
     1021 tgtatttctg ccttcagtac ccatgctgcc gagtgtgtgc gctgctacaa gtgagaacaa
     1081 caaaatgccg atgacataat cccagtaaaa caattcaaat cgccaggttt ttgaagccag
     1141 cttttgggtg tttgcccacg aaccccagca aagcatagtg atgatacaaa agacaactgc
     1201 aagggagtat gagtgtacaa tgaacatgtg tcaattgatt gagtactgat ctattgttaa
     1261 ttgtgaaatc tgttcatcgg atactggtct gcatcacttc atttctgtat ggcgcagacg
     1321 cctgcgcacc gagccgcatg acagatatgg cagcagcctt gcacgcaaac cttaccgcat
     1381 cttccatcga tttgttttca gataaagcaa ctaccaatgc cccgttgaaa atatcgccgg
     1441 ccgcggtcgt atccactgcc tgaacttttg gcgctgttat cattttacag ttgccctcat
     1501 gcaacagcaa tgcgccctgc tttcccatcg taatgatcac cgtcttaatc ccttttgcat
     1561 ttaaaaatgt tgcagcttgc tcagccgtcg caatgtttgt cacttttacg cccgtaagca
     1621 tttctgcttc tttttgattc ggtgtgatca ccgacacatg ccgtaataac tggtcaggta
     1681 gtttacacgc cggcgcagga ttcagcacaa gctggatttt tctttcagca gcaattgctg
     1741 cgacgtagga cactgtgtcg acaggtattt ccagttgcat tagtatgatc gatgccgcat
     1801 caagtttggg caatgcatgt ttcaagtcgt tcgctgttag cgcagcgttt gctccgggcg
     1861 cgacgacaat acagttctcg ccatgcgcgt caacagttat tagtgcgact cctgaaggat
     1921 gccggtggtc tgtaacgatg caggatgtgt cgatcccttc ggattgaaac aattccacag
     1981 cctgcgttcc aaaaatatca tcacccgttt ttgcgatgaa gacaacattt ccgccaagcc
     2041 gcgcggctgc gaccgcctgg tttgcgccct tgccacctgc attcatgaaa aaggtgccgc
     2101 ccaaaacagt ttctccgagc gcaggcaaat gactggtttt gatgaccatg tcagtattcg
     2161 agcttccgac gatgacaatg gaagatttca tatatataag caagctgaag tcaaaagatt
     2221 tatgaagata agggaaaagg tgctgcgata tctacagata cacggattag tatttagcgt
     2281 gtttgttatt aagatcgacc acgagaaatt cgtttgatct attttgctgc cggaacatat
     2341 gacaaccacg cggccgtcat gccgggcccc gaccgggcat ctgctctaag tagttttaga
     2401 ggccaataaa taaatctttc catccggtat tgaaatctga aatcaattta tccttcaaac
     2461 atcgattcat ttttttcagt ttgtttttct cttgcaagtg cctcctctat ttgccgcctt
     2521 cgcgggaaag acgtgcgctg acgttcgtga aatttggaca ctattttact gcgaggatcg
     2581 gcatcattcg actcaacttt aatagcacaa cccgttagta tttagaaaaa tttatcagtt
     2641 atgaagcaac atttagtcaa aaaaaggagt tcataagaaa caaggaagtt tttggtgtta
     2701 ataaaaatga gtactcttcc ttcacccccg cgaaagcggg gtttttttta ttgttgcttg
     2761 ccggccagaa acgttttagt catctcgtta agccgtgcga ctttttcagc gaaatcacct
     2821 tttagcgtat tccggatctg ctgcatgtta tcgagcactt catcaatttc ttccggaagt
     2881 aattcagaaa agatctctct tagacgtttc gctattgtgg gcgacttacc gtttgttgaa
     2941 atggcaagtt tgaggtttcc tttttgtacg acagagctca aataaaaatc gcagagtgaa
     3001 ggtttgtccg caacgttcac aagaagattc cggtgatgag cgtcatttag aatttgttca
     3061 gccagcgaaa catcgtttac agcagcgatg acaagatgta tattttcgag gtgagaggat
     3121 tgatacgctt gttcgagcaa ttcaatattt gtacgcccgg caaccaatgt tttgatacta
     3181 tcactgatct cacgcgcaac cagtcgaatg tttgttttcg gagagttact taaaactgcg
     3241 ttcaattttt caagggcaac gttgcccccg ccgacgatca gcaggtttaa ttcttccagt
     3301 ttgagaaata ttgggaacag gtggtttgac tcagccataa aacttctaag ctaaatattt
     3361 caaggcattt cctgccgcct caattgtaaa atccaggtct gcgtagctta atgcattgct
     3421 caaaaaccag ctctcgaagg cagacggcgg aagatagatg ccgctatcaa gcatcgcatg
     3481 aaaaaatttg ctgaagagac cgttgttggc tgatgacgcc gatgcaaaat cgacaacagg
     3541 ttgcccgctg aaatgaacgg agatcatcga gcccatatgg tttatgacaa acgcaatacc
     3601 tgactgttga aaaacttttt gcagccctga tcttagataa tgtcctttcg tttctaattc
     3661 ttcgtaaacg gaaggatggt ttttcaggta tgaaagcaaa gtaaagcccg cgatcatagc
     3721 aagcggattt ccactcaacg taccggcctg ataaacattt ccaagaggtg caatgtgttt
     3781 cataatttcc agcttcccgc caaacgcacc gacgggcatt ccggcaccga tcacctttcc
     3841 gtacgtaacg agatctgcgt cgatccgcaa tcgttcctgt gcgccacccg gcgacaaacg
     3901 aaaaccggtc atcacttcat caaaaatgta gatgatattt tcttcatcac ataattttcg
     3961 caaaccttct aaaaaaccat tttgcggaag tatgcagccc atgtttccgg caacaggttc
     4021 gataatgatc gccgcgatct catttttatg ctccgcaatc aaattgcgta ctgcgtccag
     4081 gtcattgtat ggagcagtta atgtatccac agcgacgcca gccgttacac ccggaacggt
     4141 ttgaatgtta aaagttgcca aaccacttcc cgccttgacg agaaacgaat ctgcatgacc
     4201 atgataacat ccgtcgaatt ttatgatctt gttgcggccg gtgaatcctc ttgccaagcg
     4261 tatcgcgctc atacatgcct ccgtgccgct attgaccatc cgaatgaggt caacgttcgg
     4321 caccatgctt ttgatgagct cagcgatttc gatttccagc tccgtcggcg caccaaacga
     4381 agttgaatct aatacctttc tttgaatcgc ttcaacaacc ggtccaaatg catgacccaa
     4441 tatcatcggt ccccacgagt tgacgaagtc gatgtatttg ttgtcatccg cgtcatataa
     4501 gtaagcaccc attgcatttt ttataaagac cggagtacct cccacgcttt taaatgcgcg
     4561 caccggagaa tttactccgc cgggaatggc ctgctgagcg cgggagaaga gggagatgct
     4621 ggtggagata ttcattttgt gaatggtgaa caatgagtaa tgagtgatca gtaatgagtg
     4681 tgggacgcgc ctagttcatc aaacccgtta attgtttaaa agtgttgaca atggcttccc
     4741 caagttcctt tagatgctct aaagagcaat aacgaagttt aacggcaatg tcgagagcag
     4801 catcaatctc aataacagag cctcttgcaa tttcaaaata tcttctccgt tctacgagag
     4861 atttccggga gcaaccttca gcgatgttta gatgagtcga cagtgcagcc cgcctgatct
     4921 gttggatcat cgcgtacctt tcctcggaag gaaaacactt tgtaatcgca taagattcca
     4981 ttgcaagctt ttgcgaaagt tggaagatgg ggagtttcgt gtgagcaagt tctaaaaaca
     5041 tggttttgat tttttagggt caaaaaattt tggctggtca agttagtcca acttttagaa
     5101 tttttactca tcactcatca ctcattattc attactcatc ccatcatgct cgccgcctcc
     5161 ttcgcaaagt acgttgcgat caaacttgcg ccggctcgtt ttatggatgt gagtgtttcc
     5221 ataattgctt tgctctcatc aatccagccc atcttcgccg cagcttttat catcgcatat
     5281 tc
//
LOCUS       DASQJI010000033         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2920435,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000033 DASQJI010000000
VERSION     DASQJI010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2920435"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1383
                     /locus_tag="VEV83_01160"
     CDS             <1..1383
                     /locus_tag="VEV83_01160"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK43745.1"
                     /translation="KQFLVESFVVSLIAFVIAIALTQLVLPFFNELANKKLSLSYLSD
                     GYLYTGYFLLLLVTALAAGFYPSLVLSSFEPVKVLYSRQTPGGRNYLTRALIVLQFAL
                     AIFLIIGSIAVNSQLNFLFHADLGYDRENLVRMNIPVNNSSDKLPALFKNELLNKPNI
                     ISVAARSSGRSISGAKVDGKQIEIEYCKIDDQFLPTFKIPIIRGRNFSASYPSDSMNS
                     IIVNESFVKEAGWKLDQAVGKQVEFGESHDDRKVNIVGVVKDYHFLSLKEKISPEVFT
                     MEPAFNFGEIWVKIKPTDAPHTLNLLQATFKNILPYYPYSYDFMDDINAKNYEAETKW
                     KQIIGIASALFIFISCIGLLGLVILSIQQRTKEIGIRKVLGAAVAKIVVLISRDFVIL
                     ISIAFVIAVPAGYYFTNKWLQNFAYRINMAWWMFGLAGAVVILVALFTISLQAIKAAI
                     ANPVKSLRTE"
     gene            1506..>1937
                     /locus_tag="VEV83_01165"
     CDS             1506..>1937
                     /locus_tag="VEV83_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK43746.1"
                     /translation="MIKHYFKIALRNLGRQKVLSLINIIGLSLGLACFSLFLLYAVNE
                     FSFDRFHTNADNIFRLYRWTEPMNGQEAEGDVYMPSPLGPALKRDMPDVVNYVRFRDA
                     WQESFIKIDGQVKRKKMSFADPSVLSVFSFPLKYGAKNALQD"
BASE COUNT          523 a          358 c          475 g          581 t
ORIGIN      
        1 aagcaattcc ttgtagaatc gttcgttgtc tcgttgatag cctttgtcat tgcaattgcc
       61 ttgacgcagt tggttctgcc gttctttaat gaactggcca ataaaaaatt gagcctgtct
      121 tatttgtctg acggatattt atatacaggc tatttcctgt tgcttttggt gaccgcatta
      181 gctgctgggt tttatccgtc gcttgtactt tcttcgttcg agccggtaaa ggttttgtat
      241 agcaggcaga cgcctggcgg caggaattat ctgacgaggg cattgatcgt gctgcagttt
      301 gcactggcga tttttttgat cataggtagc attgcggtga attcacaatt gaacttttta
      361 tttcacgcag atcttggcta tgatcgagag aacctggtta gaatgaatat tcccgtgaat
      421 aattcgagcg acaaattgcc ggcacttttc aaaaacgaat tgctcaacaa accaaacatt
      481 ataagtgttg ctgcaagaag cagcgggcga agtatttccg gggcaaaggt ggacggtaaa
      541 caaattgaaa tagaatattg caagatcgac gaccagttcc tgcccacttt taaaattcct
      601 atcatccgtg gaagaaattt ttctgcatcg tacccgtctg attcgatgaa ttcaataatt
      661 gtgaatgaaa gcttcgtgaa ggaagctgga tggaaattgg accaggcagt tggaaagcag
      721 gttgaatttg gcgagtcgca cgacgacagg aaagtaaata tcgtaggcgt tgtgaaagat
      781 tatcacttcc tgtcgttaaa agaaaaaata tccccggaag ttttcacgat ggaaccggcg
      841 ttcaatttcg gtgagatttg ggtgaagata aagccgacag acgcgccgca tacattgaac
      901 ctgttgcagg cgactttcaa aaatatattg ccatattacc cgtattcata tgacttcatg
      961 gatgatatca atgcgaagaa ttatgaggca gaaacaaaat ggaagcagat catcggcatt
     1021 gcctcggcac tgttcatttt tatttcgtgc atcggtttgt tgggcctcgt gattctatcg
     1081 attcagcaac gcacaaaaga gatcggtata cgcaaggtgc ttggtgcggc tgtggcaaaa
     1141 attgttgtgc ttatttccag ggattttgtg atactgattt caatagcatt tgttatcgca
     1201 gttccggccg ggtattattt cacaaataag tggcttcaaa attttgcgta tcgaattaat
     1261 atggcctggt ggatgtttgg attggcagga gcggtcgtga tcctcgttgc actgttcacg
     1321 atcagtttgc aggcgatcaa agcagcaata gcaaatcccg tgaaatcatt gcgcacggag
     1381 tgacgagatg agtgatgagt aatgagtgat gagtgatgag tgatcagagt tgtcaatggt
     1441 cgatggtgaa ttgtgaatga atgttcaaat tgtaaatcgt aaatcgtaat tcgtaaatcc
     1501 gaaaaatgat caaacattat ttcaagatcg cgttgcgaaa cctgggccgg cagaaagtat
     1561 tgtcgctgat caacatcata ggcctgtcgc tgggccttgc gtgtttttcg ttgtttcttt
     1621 tatatgccgt gaatgaattt agtttcgacc ggtttcatac caacgctgat aatatttttc
     1681 gcctgtatcg atggactgaa cctatgaacg gacaagaggc ggaaggcgat gtttatatgc
     1741 cttcgccact cgggccagcg ctaaaaaggg atatgcccga cgtagtgaat tatgttcgtt
     1801 tcagagatgc atggcaggaa agttttataa agatcgatgg ccaggtaaaa cgtaaaaaga
     1861 tgtcttttgc tgatccttct gtgctttctg ttttttcttt tccgcttaag tacggcgcca
     1921 aaaatgcatt gcaggat
//
LOCUS       DASQJI010000034         3048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_463211,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000034 DASQJI010000000
VERSION     DASQJI010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463211"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..2118)
                     /locus_tag="VEV83_01170"
     CDS             complement(205..2118)
                     /locus_tag="VEV83_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HYK43747.1"
                     /translation="MSSALTILRQYWGYELFRPQQEAIIQSVLEHKDTLALLPTGGGK
                     SICYQVPALIKEGLCLVVTPLIALMKDQVENLNKRNIPALALHSGQNFSDVKRTLENA
                     LHGNFKFLYVSPERLQSRLFNEYLPGLNLNLVAVDEAHCISQWGYDFRPPYLQIATLR
                     ETTDAPIIAVTASATPKVLEDIKEKLQLKNAAIFRQSFARPNLSYSAFHVDSKINKAM
                     EVLTNVAGSSIVYCKSRKLTKQVAGLLNLQKLQADFYHAGLNHEERSKKQLAWLNDET
                     RIMVCTNAFGMGIDKADVRTVVHYDVPECIENYYQEAGRAGRDGKKSYAVLLHNGEDK
                     STLKNLPEVRFPPVQEIRKIYQALADYLQVPVGIGEGRYYDFDLNEFVKNFKLDVFAV
                     MSTLKVLEQEGYVSFNESVFLPSQVSFLVPKEILFDFERSHPKLEPLIKCLLRTYEGI
                     FDNKVSVNEKQLAKLTKNSVDEIKEGLTQLNALGVIEHAPQKETPQLYFHTNRAPAEH
                     LQINIEQYRRRKEDFRLRTDTMLRYMETATACRSTFIANYFGDKEVSDCGVCDNCLKR
                     KTLPLSEKEFALIKERIDNVLTNKNVAVQDVLQACRGIKKEKLWKVLEYLQGENLITI
                     AADGNVKGAARNV"
     gene            complement(2144..>3048)
                     /locus_tag="VEV83_01175"
     CDS             complement(2144..>3048)
                     /locus_tag="VEV83_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HYK43748.1"
                     /translation="LEVFKDIKQVVFDKTGTLTTGNFKISNSKFYRDEDFAKRIAFSL
                     EKYSNHPIAKAIAQSFQRKDEIKWSAIEEIKGFGMRATDKDGNVYMAGSFAIAKHLTS
                     DASHSVYITKNDGLLAWFDVEDQIRSEAQHVISLLKAKKIKTILLSGDRKEKCEAVAV
                     RLGIDEVYAGQTPEQKLQTIEALNQQAPTAMVGDGINDGPALAKATVGISLSDASHIA
                     MQSAQVVLMNNGLKNLPLSLGLGKHTFTTIKQNLFWAFFYNIIAIPVAAVGLLTPTFA
                     ALMMGLSDVVLAINSIRLNWKKVV"
BASE COUNT          748 a          725 c          641 g          934 t
ORIGIN      
        1 agcgttttag gtgcgctggg tttaggagga cgaagcagga gacgttggta gtgtctgaca
       61 tcggccaacc gtcggaacgc ttaaagcggt ctgacggatt tcattcgtga aatgccttgc
      121 ctcaaaaacg ccgattcagt agggcagttc tttagcggtc aggtcgccgc gagcgccccg
      181 accgtaaaaa gtgtctgaca cgtttcaaac atttcgcgcc gcacctttca cgtttccatc
      241 cgctgcaatc gttattaaat tctcgccttg caggtactct aaaaccttcc aaagcttttc
      301 tttttttatt ccgcggcatg cctgtaacac gtcctgcacc gctacattct tatttgtcag
      361 aacattatcg atcctttctt tgatcagggc gaactctttt tcagaaagcg ggagagtttt
      421 gcgcttcaaa caattatcgc aaacgccgca atcgcttacc tctttatcac caaagtaatt
      481 tgcaatgaaa gtgctgcggc aagcggttgc agtttccatg tatcgcagca ttgtatccgt
      541 ccgcaaccta aagtcttctt tgcgtcgacg gtattgttct atgtttattt gcagatgttc
      601 tgcaggtgcg cggttcgtat gaaaatataa ttgcggcgtt tccttttgtg gcgcgtgttc
      661 aattacaccc agcgcattta attgagtgag accttccttt atctcatcaa cagaattttt
      721 ggtgagtttt gcaagctgtt tttcattcac cgagaccttg ttgtcaaaga tgccttcgta
      781 cgtcctgagc aagcatttga tcaaaggttc gagctttgga tgactcctct cgaaatcgaa
      841 tagtatttcc ttcggtacta aaaacgaaac ttgtgacggc agaaatacgc tctcattaaa
      901 actaacatat ccctcttgtt ccagcacttt caatgtgctc atcacggcaa acacatcgag
      961 cttaaaattt tttacgaatt cattcagatc aaaatcgtaa tacctgccct cgccgatgcc
     1021 caccggtacc tgcaggtaat cagcgagtgc ctggtagatc tttcttattt cctgcactgg
     1081 tggaaagcgc acctccggta gatttttcag agtcgatttg tcttcaccgt tgtgtagaag
     1141 cactgcgtaa gatttcttcc cgtccctgcc tgcacggcct gcttcctggt aataattttc
     1201 aatacactcg ggcacatcgt aatggacaac cgttcttacg tcggctttat cgatacccat
     1261 gccgaatgca tttgtgcaaa ccattattct tgtttcatcg ttcaaccatg ccagttgctt
     1321 tttacttctt tcttcgtggt ttaaaccagc gtgataaaag tccgcttgta acttttgaag
     1381 gttcaacaaa ccagcgacct gctttgtaag cttcctgctt ttacagtaaa caatgctgct
     1441 gccggcaacg tttgtcaaca cttccattgc tttgttgatc ttactatcaa catgaaaagc
     1501 actgtatgaa agattgggcc gcgcaaatga ctgccgaaag atggccgcat ttttcagttg
     1561 tagcttctct tttatgtcct ctaaaacttt aggagttgca gacgcggtta ctgcaattat
     1621 aggagcatcc gttgtttccc gcaaggtcgc gatctgcagg tatgggggcc ggaaatcgta
     1681 accccattga gagatgcaat gtgcttcgtc aacagcgacg agattcaaat ttagacctgg
     1741 cagatattca ttgaatagcc tgctctgaag acgttccggc gagacataca ggaacttaaa
     1801 atttccatgc agtgcatttt ctaaagttct ttttacgtca gaaaaatttt gtccactgtg
     1861 caaagccagc gcaggaatat ttcttttgtt taaattttca acctggtcct tcattaaagc
     1921 gatgagtgga gttacaacta aacacaaccc ttcttttatg agcgccggaa cctggtagca
     1981 gatcgatttt cctccgcccg ttggcagaag cgcaagtgtg tccttatgtt ctaatactga
     2041 ttgaatgatc gcttcctgtt gcggccggaa taattcatat ccccagtatt ggcgcagtat
     2101 ggttaaggct gaagacattt aaacgttgtt ggcgaacgct aatttagact acttttttcc
     2161 aattaagtct tattgaatta atcgcgagga ctacatcact taatcccatc atgagcgcgg
     2221 cgaaagttgg cgttaataat ccgactgcgg cgacagggat ggcgatgata ttatagaaaa
     2281 aagcccaaaa caaattctgt tttatggtcg tgaaagtatg tttccccaaa cccagcgata
     2341 atggtaaatt tttcagcccg ttattcatga gcacaacctg cgcgctttgc atcgcaatgt
     2401 gcgaggcatc actcaaagaa attccgacag tcgcctttgc aagagcggga ccatcgttaa
     2461 tgccatcgcc aaccattgca gttggtgctt gttgatttaa cgcttcgatc gtttgaagtt
     2521 tctgctcggg cgtttggccg gcatatactt catcgatgcc gagtcgtact gcaacagctt
     2581 cacatttttc ttttctgtcg ccgcttaata aaatcgtctt tatttttttt gctttgagta
     2641 agctgatgac atgttgcgcc tcgctccgaa tctggtcctc cacgtcgaac cacgcaagca
     2701 agccgtcatt cttggtgata taaacactgt gcgaagcatc gctcgtgaga tgtttggcaa
     2761 tggcgaatga gcccgccata tacacattac catccttatc tgttgcccgc attccaaacc
     2821 cctttatctc ctctatggca gaccatttta tttcgtcttt cctttggaac gattgggcga
     2881 ttgccttggc aatcggatga ttcgaatatt tttcgagcga aaaggcaatt cgttttgcaa
     2941 agtcctcatc cctgtaaaat ttcgagtttg aaattttgaa attgccggta gtcaatgtgc
     3001 ctgtcttgtc aaatacaacc tgcttaatat ccttgaacac ctcaaggc
//
LOCUS       DASQJI010000035         2448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2566, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000035 DASQJI010000000
VERSION     DASQJI010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2566"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..516
                     /locus_tag="VEV83_01180"
     CDS             85..516
                     /locus_tag="VEV83_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HYK43749.1"
                     /translation="MEFKLLESFDNYIDANLTLGRLEEAGIRCWLKDENTATINPILT
                     NAIGGIKIMVAEEDIENAVEILHELKEIKRKSIACPHCGSHNIEYITSNRKTTNVLIS
                     FLTWIFGSYAIGVHQVWHCFDCKEEFEQPVELNTQDALKEE"
     gene            655..1740
                     /locus_tag="VEV83_01185"
     CDS             655..1740
                     /locus_tag="VEV83_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43750.1"
                     /translation="MNKVSTFILPCLFMFLSIDNFAQQKFTGGYLIVANGDTLRGYLQ
                     EDVEGSLVTGVTFSNNENGTSSKKYVVTDAKAFHYDQGSSFEAVSYNDLNNTRTTTFA
                     KLLLTGYYRLYSLRMKDVIFFVVKNNDSTQLIFDDIRRTDGSIETTGNYVNVLSFLSR
                     TCDKLKSEVTRLHYAEPEMLSFISRLNQCISPNETNTSFYIKPHSTATVYLYAGGLPL
                     GDKYELIGRVGTKITTPSISKNLSLDVAFTYSTHKEIETYEYSSTTYKYDHILKLQTL
                     SGSFQYDIATGRLRPYFQAGVGLTFSQEQDPINHGGIEKFENDFGPSFLGAIGVEGYV
                     TKHLAIKADWRYELFFHYPTIGLAYFF"
     gene            complement(1957..2388)
                     /locus_tag="VEV83_01190"
     CDS             complement(1957..2388)
                     /locus_tag="VEV83_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43751.1"
                     /translation="MKKFMALMLIIGSSGTAAMAQCDKKVLYTSMKEEWLNSKDEIQK
                     TDQDKVTVEVSKTNIVINHNDDPNDQMKGEIKNADCKWSEAFKNGKTTIHAQLVEGSN
                     DVHDATLTIEGKDGAMFILIELADHPDMRIKAYVDKYEEQG"
BASE COUNT          694 a          540 c          498 g          716 t
ORIGIN      
        1 agaagataaa acggaagcga cccaactaac tttttcacgt aaaatgccaa cacttttcca
       61 tgaccggaat acaacctcaa gaatatggaa tttaaactgc ttgaaagctt cgacaattac
      121 atcgatgcaa atctaacctt aggaaggctt gaggaagcag gcatcagatg ctggctcaag
      181 gatgaaaaca cagcaacgat aaacccaata cttacaaatg ctatcggcgg gataaagatc
      241 atggttgcag aagaagacat tgaaaatgct gtagaaattt tacatgagct aaaagagatc
      301 aaaagaaaaa gcattgcatg tccacactgc ggcagccaca atatcgaata tatcacgtca
      361 aaccgaaaaa cgacaaacgt tttgatctcg tttctcacat ggatcttcgg gagttatgcg
      421 atcggcgtcc accaggtttg gcattgcttc gattgcaaag aagaattcga gcaaccggtt
      481 gaattaaata cacaggacgc cctcaaggaa gaataagaat tctcgcttgt ttttatcaac
      541 ttacaatttt cgctatccat gcggctgcct tgtgcgtgtg tccgctcctc tcgagttgaa
      601 acattttgct tgattctttt ttaattattt ttagcctgtc aaaacaactg ctttatgaat
      661 aaggtttcaa cattcatttt accctgtcta ttcatgtttt tatcgatcga caattttgcc
      721 cagcaaaaat ttacgggagg atacttgatc gttgcgaatg gggacacgct tcgcggttat
      781 ttgcaggagg acgttgaagg cagcctggtg acgggtgtta cgttcagtaa caacgaaaac
      841 ggaacttctt caaaaaaata tgtggtaact gatgcaaagg catttcacta cgatcaagga
      901 agctcatttg aggctgtctc gtataatgat ctgaacaaca cgcgcaccac cacttttgca
      961 aaacttcttt taacaggcta ctacaggtta tactcgctgc gaatgaaaga tgttatattt
     1021 tttgtggtaa agaacaatga ttcaacgcag cttattttcg atgacatccg aagaaccgac
     1081 ggcagcatag agacaacagg aaactatgta aatgtgcttt cgtttctttc acggacctgc
     1141 gacaaactca aaagcgaggt aacgcggctg cactatgccg agcccgaaat gttgtctttt
     1201 atatcccgct tgaatcaatg tatttctccc aatgaaacga atacctcgtt ttatataaaa
     1261 ccacattcta cagccacagt gtacttgtac gcgggcggac tgccgcttgg agataagtat
     1321 gaactgatag gaagagttgg aactaaaatc acaactccgt ccatcagtaa aaatttgtct
     1381 ttagatgtgg cgttcaccta ctcgacgcat aaagaaatcg aaacttacga gtactcgagt
     1441 accacgtata aatatgatca catcctaaaa cttcagacct tatccggatc attccagtat
     1501 gatatcgcga ccggccgtct gagaccgtac tttcaagccg gggtggggct tacattttca
     1561 caggaacaag atccgatcaa tcacggcgga atagaaaaat ttgagaacga ttttggtccg
     1621 tcgtttctcg gtgcgatcgg cgttgagggc tacgtaacaa aacatttagc tataaaggct
     1681 gactggcggt acgaactttt ctttcattat ccaacgattg ggctggccta ttttttttaa
     1741 ataggtttat gataacctcg cttcttttaa acttgcgata acgttcgggt tgtcaaggcc
     1801 tcttcggcgg gcaatctcaa ctctgcaatt tgcaacgtga aatcggaatt tgctttcacc
     1861 ttccaggcaa gtgcctcaaa ttttttgtag actaccacct gcaatgctcc taaatgcatc
     1921 gtcgctgcaa caactgcaat tgccggcgcg taatgatcac ccttgttctt cgtatttgtc
     1981 gacgtatgct ttgatgcgca tatccggatg gtcggcaagt tcaataagta tgaacattgc
     2041 tccgtctttt ccttctatcg tgagggttgc atcgtgcaca tcattgctgc cttcaacgag
     2101 ctgcgcgtgg atcgttgtct tgccattttt gaaagcttcg ctccacttgc agtccgcatt
     2161 tttaatttct cctttcatct ggtcgtttgg atcgtcgttg tgatttataa caatattcgt
     2221 tttgcttacc tctaccgtca ctttatcctg gtcagtcttc tgtatttcat ctttactgtt
     2281 cagccattct tccttcatcg acgtgtacaa aactttcttg tcacattgtg ccatcgctgc
     2341 cgtgccggat gagccaataa taagcatcag cgccataaat tttttcatga tcatttattg
     2401 tttgattaaa gatgaacgat ctacggtcaa gagtgatgcc aaaaaaaa
//
LOCUS       DASQJI010000036         3238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_924100,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000036 DASQJI010000000
VERSION     DASQJI010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924100"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VEV83_01195"
     CDS             <1..238
                     /locus_tag="VEV83_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4197 domain-containing protein"
                     /protein_id="HYK43752.1"
                     /translation="FSPVIKQSLDKVDATKYWSQTFSVYNKFSTKRVNTDLTAYVTQK
                     AIDGIFYQVALEEQKIRKDPAARVTDLLRSVFGQ"
     gene            complement(419..982)
                     /locus_tag="VEV83_01200"
     CDS             complement(419..982)
                     /locus_tag="VEV83_01200"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HYK43753.1"
                     /translation="MNKETNPWQVVAEKNIYDNKWINVKEYDVINPSGGKGIYGKVHF
                     KNHAIGIVPLDEQYNTWLVGQFRFATNNYSWEIPEGGGLLNEPPLAAAQRELLEETGL
                     KADGWREVLEMHLSNSVTDEYCFVYVATGLTLHQTSFDETEKITIKKLPFNEAYEMVM
                     NNSITDAITVAAILKVNMLLQEGKLEL"
     gene            1098..2114
                     /locus_tag="VEV83_01205"
     CDS             1098..2114
                     /locus_tag="VEV83_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43754.1"
                     /translation="MFESNKAGMSFFRYTSIARKVYKEIRIQKKFNREFLIPYLDELE
                     KKYNGKFQSEQRGKILDYYGLFITSFLCSSYKRLYGKALTLDERKRATLFGILTPVGD
                     DLFDIDKLDQESIRQITFAPETFDATTFSACVAKEIQTYLLHNVPHKKEYIEASKNVL
                     NIQVETVRQKNRDIAIDDMRRITYTKGAVSVIIYHQCLDEAADTQMQEVLFLIGSLYQ
                     VGNDIFDLYKDVRDNIYTLVNTCEDFEQFRKEFLERVKLQNEKIHALPYDQKDKEEFC
                     IVMNTINARSVVAIEQFIAMEKRVGKNIDWWQWQRKDMIVDMEKTKNILRWLHYIYTL
                     PKLK"
     gene            2139..>3238
                     /locus_tag="VEV83_01210"
     CDS             2139..>3238
                     /locus_tag="VEV83_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43755.1"
                     /translation="MNGMRRNEDARVDAARTLKIICIAFILFIQSNFLFAQNRDSLIH
                     VLLRDIASMQVTNNGEFYAGQFPTFRECAGAPHNYQPDNNIFYTAVAAFALRNMLPYV
                     DSKDRELAEQIITRIQKIYPLYRNKHGYPYYAFWAQDDVIMPHSYFYKYLKQVFGQGE
                     DADDTVIIMMTDSTDDATTLQLKRRLEEMSNLSSPGRRIRATYSKYKNIPAYSTYLGG
                     RTVPDFDFAVQCNILYFVYDKNLPLSRQDTATLHLLTEMVHNREYMTAPVYLSPYYVR
                     SSILIYHIVRLMTVFHIPQLEPYRQQLIGDAQKEFNESTNVMDKIILSTSLMKLGVNA
                     EVPPFTSISEFEGSNQKQFVFFQARAAFSYPTP"
BASE COUNT          939 a          676 c          716 g          907 t
ORIGIN      
        1 gtttagcccg gtgatcaagc aatcacttga taaagtggat gcgacaaaat actggagcca
       61 aacattttcg gtctataata agttttctac caaacgggta aacaccgatc ttaccgctta
      121 cgttacccaa aaggcaatcg acgggatctt ttatcaagta gcgctcgaag aacaaaagat
      181 caggaaagat cctgcggcgc gtgtgactga tcttttgaga tcggtttttg gacaatgatc
      241 tttaaggttt gatgtttgag gtttgaggtt tgaagttcgt ttactggttt attgggttat
      301 tcgtaattgg tttattgggt tattcggtta ctggtttatt gggttattgg tttaatgggt
      361 tagtgggtta ttgggggttc gtaatttcat ttgccacccg caattcacca ttgacaattc
      421 acaattccag cttgccttct tgcaatagca tgttcacctt tagtatcgcc gcaaccgtga
      481 tcgcgtcggt aatagagttg ttcattacca tctcgtatgc ttcattgaac ggcaactttt
      541 tgatggttat tttttctgtt tcgtcgaagc tggtttgatg gagcgttaaa ccggtagcaa
      601 cataaacaaa acaatactca tcggtcacag aattagagag gtgcatctcc agcacttcgc
      661 gccaaccgtc cgctttcaag cctgtttcct cgagtagttc ccgttgcgcg gcagcaaggg
      721 gcggctcatt caacaggcct ccgccttccg ggatctccca actgtaattg ttcgtggcaa
      781 aacgaaattg tcctaccagc caggtgttat actgttcgtc gagcggcact atgccgatcg
      841 cgtgattctt gaaatgcact ttgccataaa ttcctttacc acctgaagga ttgatgacat
      901 cgtactcttt tacatttatc catttgttgt cgtagatgtt tttttcggcg acgacctgcc
      961 agggattagt ctctttattc attgcagtaa taaagtgggc aaagctaaga gcctatgatt
     1021 tctgggtcaa attaaagttg tcatcaaata gcttttatcc tgttccgttc aacatgcaaa
     1081 cttctcaact tttaactatg tttgaatcta acaaagcagg gatgagtttc tttcggtaca
     1141 ccagcatagc gcgcaaagtt tataaggaga tcaggataca aaaaaagttc aacagggaat
     1201 tcctcattcc gtacctggat gaactggaga aaaaatataa tggaaaattt caatcggaac
     1261 aaagaggaaa gatcttagat tactacggtt tgttcattac atcgttttta tgcagcagtt
     1321 acaagaggct gtatggaaaa gcgcttaccc ttgatgaacg caaacgggca acgctatttg
     1381 gtattttgac gccggtaggt gacgacctgt ttgatatcga taaacttgat caggaaagca
     1441 tcaggcaaat aacgtttgcg ccggaaactt tcgatgctac tactttttcg gcgtgtgtag
     1501 caaaagagat tcagacttac ctgctgcaca atgtaccgca caagaaagaa tatattgagg
     1561 cctcaaaaaa tgtattgaac atacaggttg aaaccgtaag gcaaaaaaac cgtgacattg
     1621 cgatagacga catgcggcgg ataacgtaca cgaagggtgc agtgagcgtg atcatctatc
     1681 accagtgtct tgatgaagct gctgacacgc aaatgcagga agtactcttt ttgatcggca
     1741 gcttatacca ggtcggcaat gatatttttg atttatacaa agacgttcgc gacaatattt
     1801 atacactcgt aaacacgtgt gaagattttg aacagttcag gaaagaattt ttagaaaggg
     1861 tgaagttgca gaacgagaag atccacgcgc tgccgtacga tcaaaaagat aaagaagaat
     1921 tttgcatcgt gatgaatacg atcaatgcaa ggagcgtagt tgctatcgag caattcatcg
     1981 caatggaaaa aagggttggc aaaaacatcg attggtggca atggcagcgt aaggatatga
     2041 tagtagacat ggaaaaaaca aagaacatcc tacggtggct acactatatt tatacccttc
     2101 cgaaattgaa ataaaaaagc caaattggta accagccgat gaacggaatg cgacgcaacg
     2161 aagatgccag ggttgatgca gcccgtaccc taaaaattat atgcattgcg tttatcttat
     2221 ttattcagtc taatttttta ttcgcgcaaa accgcgactc gctcattcat gtgctgctaa
     2281 gggatattgc ttcgatgcag gtaacaaata atggagaatt ttatgcaggc cagtttccga
     2341 cattccgtga atgtgccggc gcgccgcata actaccagcc cgataataat attttttaca
     2401 cggctgttgc tgcgttcgcg ttgcgcaata tgctgcctta tgtcgacagc aaagacagag
     2461 aattagcgga gcagatcata acccgtattc aaaagattta cccgctgtac cgaaataaac
     2521 atggctatcc ctattatgca ttctgggcgc aggacgatgt tatcatgcct cattcttact
     2581 tctacaaata tttaaaacaa gtcttcggcc agggtgagga tgcagacgac acggtgatca
     2641 ttatgatgac cgacagcact gatgatgcaa ccactttgca attaaaacgg cggcttgaag
     2701 aaatgagcaa tctttcatca ccggggcgaa ggatacgggc cacttattcg aaatacaaaa
     2761 atattcccgc ctacagtact tatctcggcg ggcgaacagt tcctgatttc gacttcgcag
     2821 tacaatgcaa cattctgtac tttgtatacg ataaaaacct tccacttagc agacaggaca
     2881 ctgcgacgtt gcacttgcta accgaaatgg tgcataatcg tgaatacatg acggcgcctg
     2941 tttacctctc accgtattac gttcgttcct cgatcctcat ctatcatatc gtgagattga
     3001 tgaccgtatt tcacatccct cagcttgaac cgtacaggca gcaacttatt ggggatgcac
     3061 agaaagagtt caacgaaagc actaatgtga tggacaagat catactcagc acttcgctta
     3121 tgaagttggg cgttaatgca gaagtgccac cattcaccag catatctgaa tttgagggca
     3181 gcaatcaaaa gcagtttgtt tttttccagg cgagagctgc attttcttat ccaacacc
//
LOCUS       DASQJI010000037         3894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1384903,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000037 DASQJI010000000
VERSION     DASQJI010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3894
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1384903"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2819)
                     /locus_tag="VEV83_01215"
     CDS             complement(<1..2819)
                     /locus_tag="VEV83_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK43756.1"
                     /translation="MKLRTAIFYLCCFSACLAIDSCKNGDALFESISSSHSGITFSNN
                     ISENDSINPLDVENMYNGGGVGVGDFNNDGLQDLYFTGNMVSNKLYINKGNFKFADVT
                     TEAGVDGGGNWSRGVAVVDINNDGLLDIYVSETIKNDPAQRANLLYVNRGNDNNGIPH
                     FKELAREYGLADTGHSTQAAFFDYDNDGDLDVYIATNVISKNRFTDQFRPILKNGENP
                     STGRLYRNDWNESLKHPVFTDVSEQAGIRTEGYAHAVTVADINNDGWKDIYVTNDFIT
                     NDLLWINNHDGTFTNELSEYFKHTSANAMGNDITDINNDGRPDVVALDMDPQDNFRKK
                     MMLNANNYQRYLNSDRFGYNYQYIRNTLQINCGNTVGENDSIGHPIFCDAGFYAGIAE
                     TDWSWAPVVADFDNDGYRDIIVTNGYPRDVTDHDFIAFRNQATYIANKQQLLDAIPQV
                     KIHNYAFHNNGDLTFSNATDSWGMETPTFSNGAVAVDLDNDGDLDLVINNINDEALVY
                     KNKSRDKNKSNSHFLVVKFSGDKNNINGIGALADIYYDHGRGHQFWENTPYRGYLSTV
                     QDVAHFGLDTISSVDSIIIRWPGNRKQVLQNVKADQTITAKVQDAHEQYFFDTAKINN
                     NSLFENITKTVNVNYVHKERDFIDFNIQKLLPHKFSQYGPGMAAGDIDGNGLDDIVTG
                     GSLNNSGQIFFQQANGSFIQKVLLPGKDSADKNSEDEGLLLFDADGDGDLDLYIASGG
                     YETDHESPSYQDQLYLNDGKGSFKLDSLALPQNFTSKFCVRAADYDKDGDLDLFVAGR
                     VEPWNYPKSVSSFILRNDSKNGVVKFTDVTSSVAKDLVNIGLVCDAVFSDYNNDGWPD
                     IILAGEWMPIMFFENNKGVFKNVTSASGIDDETGWWNTIAPGDFDNDGDIDYIVGNTG
                     LNSFYRASEKYPVSVYGKDFNNDGS"
     gene            complement(2904..>3894)
                     /locus_tag="VEV83_01220"
     CDS             complement(2904..>3894)
                     /locus_tag="VEV83_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK43757.1"
                     /translation="NGPESVFAAQTSVQDGSSVDWGGDPNGNYGDILNFPYTGGPGAC
                     CGFYNPSQDLANAYKTDANGLPLLDASGEWTGYQGAWVSDQYNPPYTGTVDPRIDFTM
                     GRPGIPYLDWGPHPGIAWIRNPVNDGNKSPKKNVYAASQKDQYTDVGSAYWGPTELVA
                     NNVNIIRFADVILWAAECAADAGDLVAAKDYVNMVRNRIADNPDTWVYKNADYNAATA
                     KYSSTATPADKYLIKPYTSFPSKDYAVNAVRFERRLELAMEGHRFFDLVRYGSDVAEA
                     TLDAYMNREQDIRPLKEGGDWKPGKNEYFPIPQDVINNMNSDGTERLVQNPGY"
BASE COUNT          991 a          925 c          836 g         1142 t
ORIGIN      
        1 tagcttccgt cattattaaa gtctttgccg taaacagaca ccgggtattt ttcacttgcc
       61 ctgtaaaatg agttcaaacc ggtattgccg actatgtaat cgatgtcgcc gtcgttatcg
      121 aaatctcccg gtgcgatggt gttccaccag ccggtttcat catcgatgcc ggaagccgaa
      181 gtaacattct taaatacgcc tttattgttt tcgaaaaaca tgatcggcat ccactcacct
      241 gcaaggataa tatccggcca gccatcgtta ttatagtctg aaaaaacggc atcacaaaca
      301 aggcctatgt taacgaggtc tttggcaacg ctggatgtga cgtcagtaaa tttcacgacg
      361 ccgttctttg aatcatttcg caggatgaag ctggaaactg acttaggata attccatggc
      421 tcaaccctgc cggctacgaa gaggtcgaga tcgccgtctt tgtcgtaatc ggccgcacgt
      481 acacaaaatt tgctggtaaa attttgaggc aaagcgagac tatccaattt gaaacttccc
      541 ttgccgtcat ttagataaag ctggtcctgg tagctcggag attcgtgatc ggtctcgtat
      601 ccgccgctcg caatgtatag atcaaggtcc ccgtcaccgt cagcatcaaa tagcaaaagc
      661 ccctcgtctt ccgaattctt atccgcagag tccttacccg gcagaagaac tttttgaata
      721 aatgagccgt tcgcttgctg aaaaaagatc tggccactgt tattaagtga tccgccggta
      781 acaatatcat ctaaaccgtt tccatcaatg tcacctgccg ccatgccagg accgtattgt
      841 gagaatttat gcggcaacaa tttttgtatg ttgaagtcga taaagtctct ttccttgtgc
      901 acataattaa cgttgaccgt tttggtaatg ttttcgaaaa gactgttgtt gttgatcttt
      961 gccgtgtcga aaaaatattg ctcgtgtgca tcctgaactt tcgctgtgat ggtctgatct
     1021 gcttttacat tttgtaatac ctgttttcta ttgcccggcc accttatgat aattgaatcc
     1081 accgaactta tcgtatcaag cccgaaatgc gcaacgtctt gtaccgtgga aaggtagccg
     1141 cgatagggag tgttctccca gaattggtga ccgcgaccat gatcataata aatatctgca
     1201 agagcgccga taccatttat attgtttttg tcgccggaaa attttacaac caggaagtga
     1261 gagtttgatt tattcttatc tcttgatttg ttcttataaa ccagcgcctc gtcgttgatg
     1321 ttgtttatga caaggtcaag atccccgtca ttatctaggt caactgccac agcaccgttg
     1381 gagaatgtcg gcgtttccat tccccatgaa tctgtcgcgt ttgagaaagt tagatcaccg
     1441 ttattatgga aggcatagtt gtggatcttc acctgcggga tcgcgtctaa taattgttgt
     1501 ttgttcgcga tataggttgc ctggtttctg aatgcaatga aatcgtgatc cgtgacatct
     1561 cttggatagc cgtttgtgac aatgatatcg cgatatccgt cgttatcaaa atcggccacc
     1621 accggggccc agctccagtc tgtttctgca atgcctgcat agaagccagc gtcgcagaat
     1681 atcggatgcc cgatcgaatc attctcaccg actgtgttgc cacagtttat ttggagtgtg
     1741 ttcctgatgt actggtaatt atatccaaac cgatcgctgt tgagatagcg ctggtagttg
     1801 ttcgcattca gcatcatttt ctttctgaag ttatcctgtg gatccatatc caacgccaca
     1861 acatccgggc ggccatcatt atttatatcc gttatatcat tccccatggc attcgcggaa
     1921 gtgtgtttga agtactccga cagctcattc gtaaatgttc catcgtgatt attgatccag
     1981 agcagatcgt tggtgataaa gtcattcgta acataaatat ctttccatcc atcattgttg
     2041 atgtcagcga cggtaaccgc atgcgcgtaa ccttcggtcc ggatgccggc ttgttcagaa
     2101 acgtctgtaa aaaccgggtg cttcagtgat tcattccagt cgttgcggta aagtctgcct
     2161 gtgctgggat tctctccatt ttttaaaatc ggccgaaact gatccgtaaa acggtttttc
     2221 gagatcacgt tcgtggctat gtaaacatcc agatcgccat cgttgtcgta atcgaaaaaa
     2281 gcggcctgcg ttgaatggcc agtgtctgcc aatccatact cgcgagccaa ttctttaaaa
     2341 tgcggaattc cattgttatc atttccccgg ttcacataca aaagattggc ccgttgcgca
     2401 ggatcattct taattgtctc ggatacgtat atgtcgagca acccatcgtt attaatgtct
     2461 accactgcaa caccacgcga ccagtttccg ccgccatcaa caccggcttc ggttgttaca
     2521 tctgcgaatt tgaaattgcc tttgtttatg tacagcttat ttgagaccat gttacctgtg
     2581 aagtacaaat cttgtaatcc gtcgttattg aaatcgccga cgccgacacc gccgccgttg
     2641 tacatatttt ctacatccag cgggtttatt gaatcgtttt cggagatatt gttactaaaa
     2701 gttattcctg agtggctgga gcttattgac tcgaaaaggg catcaccgtt tttgcaggaa
     2761 tcaatggcaa ggcaagcaga gaagcagcac aaatagaaaa tggccgtacg taatttcact
     2821 tcgttttgca gttaaataga aatagaaagg cagagctaaa ataactctgc cttacttaat
     2881 aaaaagcaaa tgatttttaa atattaatag cccggatttt gaactaaccg ttcagtaccg
     2941 tctgaattca tgttattaat gacgtcttgc ggaatgggga aatattcgtt cttgcctggt
     3001 ttccaatcgc ctccctcctt caatggcctg atatcttgtt ccctattcat ataagcatcg
     3061 agtgtcgctt cagcaacatc gcttccgtat ctcacgagat cgaagaatcg gtgtccttcc
     3121 atcgccaatt ccaatctcct ttcaaaccga acagcgttga ctgcatagtc ttttgaaggg
     3181 aacgaagtat aaggttttat taaatactta tcagccggtg tcgctgtgct cgaatactta
     3241 gcagttgccg cgttgtaatc agcatttttg tatacccagg tgtcggggtt gtccgcgatc
     3301 ctgttccgca ccatgtttac ataatccttt gctgcaacca gatcgcctgc gtcagcagcg
     3361 cattcagctg cccataaaat aacatcagca aagcggataa tgttcacatt gttcgcaaca
     3421 agctctgttg gtccccaata agcactacca acgtcggtgt actgatcttt ttgcgaagcg
     3481 gcatacacat ttttcttggg actcttattt ccgtcattca ccgggtttct gatccatgct
     3541 ataccagggt gcggacccca atccaggtaa gggatgccag gtctacccat cgtgaaatca
     3601 attcttgggt caacggtacc cgtgtatgga ggattatatt ggtcgctaac ccaagcgccc
     3661 tgataaccag tccattctcc agaagcatcc agtaacggca ggccattcgc atcagtcttg
     3721 tacgcattgg cgagatcttg cgaaggatta taaaaaccgc aacaagcgcc gggaccaccc
     3781 gtgtaaggga agttcaggat atcgccatag ttaccatttg gatcaccacc ccagtctaca
     3841 gaagaaccgt cctgaacaga agtttgtgca gcgaaaactg attccggacc attt
//
LOCUS       DASQJI010000038         4905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2920838,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000038 DASQJI010000000
VERSION     DASQJI010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2920838"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1522)
                     /locus_tag="VEV83_01225"
     CDS             complement(<1..1522)
                     /locus_tag="VEV83_01225"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK43758.1"
                     /translation="MKRTRSAARLLLACLLLSSCNQKEEQARMPKQYTAEQLRNTVSI
                     EAAGFNSDESKVLVDDNSTGIFNVYELNVSDTAIKPLTTSSKESFFVADYLPGTDKFI
                     FTHDIGGNENYHLYLMSNGDTTAKDLTPWANSQNSFTGWSEDKKSLYISSNKRDARFF
                     DLWKMDTATWTPSLFYQNDSGLDVAGVSKSQRYVALAKSITTDKNDLYLYDRTTKSMK
                     RLSNDNEATWFAQAIEKNDSIMYYTTNDGSEFSYLVKYNINTGKAEKFYEDKWDVSGM
                     TLSEHEKYHTILINEDGKNKVLLFDHATNEPVSFPEIKDADVQSVIISPTETKLLVTA
                     GSSTSPQNLYVYDLVKKELKQLSSTLNKEIDENDLVKAEVVRFKSFDGKEIPAIYYKP
                     LQASKENKVGALVWVHGGPGGQSRIGYSNSVQYLVNHGYAVLAVNNRGSSGYGKTFYK
                     MDNKDHGGGDLKDCVWGKKWLAEQDYIDSNAIGIYGGSYGGCMVLNALCFYPDEFKA"
     gene            complement(1768..3717)
                     /locus_tag="VEV83_01230"
     CDS             complement(1768..3717)
                     /locus_tag="VEV83_01230"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK43759.1"
                     /translation="MTVTAFGGSSKWKDAPAAIALLNKTQLERFDEKSLVPVMNTVAG
                     VRMEERSPGSYRLSIRGSLLRSPFGVRNIKIYRNDIPLTDAAGNTYLNLVDINQLESI
                     EIIKGPASSMYGANTGGAVLLRSDPSLISQKNNFNALLEAGSFGLFNEQAGWNYHGKN
                     ISFNVQQSHVQCDGYRQQSALRRDAIQGDLKWNLNSKEQFSALLFYTNLHYETPGGIT
                     KQQMDSLPTLARQPAGIFPGAVEQQAGVYNKTGFAGITLKSLIGKSWSNTTSATINHT
                     DFKNPFITNYEHRDELNYGGRTVFQFDNSKWKWLTGAEWQQNISRINNYENNGGDPGD
                     LLFKDEVHVTQYFLFTQLNVQFNRFTAQAGISANRQLLKYNRLSDSVYNYWQHQNTNI
                     FVAPRLSLLYRITNAFSVYGILAKGFSPPTLAEVRPSTNQFYNLQPEYGWNVEGGLKG
                     AVAGGRFEFDGSVYSFNLKNAIVRQTDSSGADFFLNAGGTKQTGMELWLSAHLVRNND
                     RFVSNLTISNSFAYQPYKFNDYVSGTKDFSGNHLTGVPKNIDVIMADIVTKSGIYLNT
                     NFNFTSSIPLTDANDVHADAYKLWQLKLGYKKQFSKTVLDLFIGADNLLDETYSLGND
                     LNALGGRYYNPAPGRNYFGGVVLSF"
     gene            complement(3983..>4905)
                     /locus_tag="VEV83_01235"
     CDS             complement(3983..>4905)
                     /locus_tag="VEV83_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HYK43760.1"
                     /translation="RVFLMGEEVAEYNGAYKVSQGMLAEFGPKRIIDTPISELGFSGV
                     AVGAAQNGLRPIVEFMTWNFAVLALDQILNTASKMLAMSGGQIGCPIVFRGPNGSAGQ
                     LGAQHSTAFENIYANIPGLKVVSVSNGYDAKGLLKQSIRYEEDPVIFMESEVMYGDKS
                     EVPEDEYYIELGKADIKRPGGDVTIVSFNKLMKVALGAAAELEKEDVSAEVIDLRTIR
                     PLDWYTVLESVKKTNRLVIVAEEWPMCGVASELAYRIQKEGFDYLDAPVRRITTADAP
                     MHYAPNLVAAYLPDIPRTVKLVKEVMYMKK"
BASE COUNT         1252 a         1157 c         1038 g         1458 t
ORIGIN      
        1 cagccttgaa ttcatccgga taaaaacaca acgcgttcaa caccatgcaa ccaccgtagc
       61 ttcctccata aatgccaatc gcattgctgt cgatatagtc ctgttccgcg agccattttt
      121 taccccacac acaatctttt agatcacctc caccatggtc cttgttatcc attttgtaaa
      181 acgtttttcc ataaccgctg cttccacggt tattaacagc gagaactgca taaccatgat
      241 tgacgagata ctgcaccgaa tttgaataac cgatccggct ttggccgccg ggacctccat
      301 gcacccacac caaagcgccc actttgtttt ctttgcttgc ctgcaatggc ttataataaa
      361 tggcaggaat ttctttgccg tcgaaagatt tgaatcgcac cacttctgct tttaccaggt
      421 cattttcatc gatctctttg ttgagtgttg agctgagttg cttcaattct tttttaacca
      481 aatcgtaaac gtacagattc tgcggacttg tgctgcttcc ggcggtcact aataatttcg
      541 tttcagtagg tgatataatg acactttgta catcggcatc ctttatttca ggaaaactca
      601 ccggttcatt cgttgcatga tcaaacagca acactttatt tttcccgtct tcattgatca
      661 atattgtatg atacttttcg tgctcgctca gtgtcatgcc ggagacatcc cacttgtctt
      721 cgtaaaattt ttccgctttg cctgtgttga tattgtattt taccaggtaa ctgaactcgc
      781 ttccatcgtt cgtggtataa tacatgatgc tgtcattctt ttcaatagcc tgcgcaaacc
      841 acgtcgcttc attatcgtta ctgaggcgct tcatgctttt tgtagtgcgg tcgtagagat
      901 acaaatcgtt cttatcggtg gtaatgctct ttgcaagagc cacataacgc tgcgatttgc
      961 ttacacctgc aacgtcgagt cctgaatcat tttgataaaa caacgacggg gtccatgtag
     1021 cggtgtccat tttccagaga tcaaaaaatc ttgcatcccg tttattgctg ctgatataaa
     1081 gcgatttctt atcctcgctc cagccggtaa aactgttctg gctgttagcc cacggtgtaa
     1141 gatcctttgc ggtggtgtcg ccattgctca ttaagtataa atgatagttc tcatttccac
     1201 cgatgtcatg tgtgaaaata aatttatcgg ttccgggcaa ataatcggcg acgaaaaaag
     1261 attctttgga tgacgtcgtt aacggcttga tggctgtgtc tgaaacgttc agctcataca
     1321 cattaaagat gccggtactg ttgtcgtcga ccaatacttt gctttcgtct gaattgaatc
     1381 cggccgcttc gattgaaacg gtgtttctca attgctcagc tgtatattgt ttgggcattc
     1441 ttgcctgttc ttctttttga ttgcatgatg acagcagcaa gcaagcaagt aagagacgtg
     1501 cggcagatcg tgttcttttc ataacagtag ttttgtcgct gaaatttcgg cgacgcaagt
     1561 ttaaacaatt taatgatacg gctggagccg ccggtaaaat gaaggattga agaacgactt
     1621 atcggaaaac gcagccaggc ttgttattaa tctcaacgtg ctcgcacttt ccctgctggc
     1681 tgtgcctatg acaggatgct tcaaaaaaaa ttatccgttt caacttagta gaattgaatt
     1741 aatgcaagac gggataacaa gaatggttta aaaactaagt acaactcctc caaaataatt
     1801 tcttccggga gccggattgt aatacctgcc gccgagggcg ttgagatcat taccaagact
     1861 atacgtttca tcaagtaaat tgtcggcgcc gataaaaaga tcgaggacag tttttgaaaa
     1921 ttgttttttg taaccaagct tcagttgcca tagtttgtac gcatccgcat gcacatcgtt
     1981 cgcatctgtt aacgggatcg atgaagtgaa attgaaattt gtgtttagat aaatgcctga
     2041 tttggtaacg atgtcggcca tgataacgtc gatgtttttt ggaacacctg ttaaatgatt
     2101 tcctgaaaaa tcttttgtgc cggacacgta atcattgaat ttatacggtt ggtatgcaaa
     2161 gctgtttgag attgtaaggt tgcttacaaa ccggtcattg ttcctcacga gatgcgcgct
     2221 caaccacagc tccattccag tttgtttcgt gccgcccgcg ttcaaaaaaa aatctgcgcc
     2281 gctgctatcc gtttgccgaa cgattgcatt ctttaaattg aatgaataca ccgacccatc
     2341 aaattcaaat cggccacccg caactgcgcc tttcaggcct ccttcaacat tccatccata
     2401 ttcaggctgc aggttataga actgatttgt tgacggcctg acctctgcca gtgtcggcgg
     2461 cgaaaagcct ttcgctaaaa ttccataaac cgaaaatgca tttgtgatcc tataaagcaa
     2521 gctcagtctt ggcgcaacga atatgttggt gttttgatgc tgccaatagt tatacactga
     2581 atcagaaagg cggttgtact ttaatagctg gcggtttgca ctgatgccgg cctgcgcagt
     2641 gaaacggtta aactgaacgt tgagttgggt gaataaaaaa tactgcgtta catgcacttc
     2701 gtctttaaat aacaggtctc ccggatcgcc gccattgttc tcgtaattat ttatccgcga
     2761 gatattttgt tgccattctg cgccagttag ccatttccat tttgaattat cgaattgaaa
     2821 caccgtcctg ccgccataat tcaattcgtc gcgatgctca tagtttgtaa taaaaggatt
     2881 tttgaaatcc gtatgattaa tcgtggccga tgtagtattg ctccacgatt ttccgatcaa
     2941 agattttaaa gttatgcccg caaagcctgt tttattataa acgcctgcct gttgttccac
     3001 agcgccggga aaaattcctg ccggttgccg cgccagtgtg ggcaaagaat ccatttgttg
     3061 tttagtgatc ccgccgggtg tttcataatg aagatttgta tagaataaaa gcgccgagaa
     3121 ttgttctttc gaattcaggt tccatttcag atctccctgt atcgcgtccc ttctcaacgc
     3181 gctttgctgc cggtagccgt cgcactgcac gtgagattgc tggacgttaa acgaaatgtt
     3241 ttttccatga tagttccagc cagcctgttc attaaataat ccgaaagatc cggcttccag
     3301 cagcgcgttg aaattatttt tttgactgat gagcgatggg tctgatcgca gcaatacggc
     3361 gccgcctgtg ttggcaccgt acatgctgct tgcaggaccc ttaatgatct ctatcgattc
     3421 aagctggttg atgtcgacca aattcaaata ggtgtttccg gctgcatcgg taaggggaat
     3481 gtcgttgcga taaattttga tatttctcac accaaacggc gaccgcagca aactgccgcg
     3541 gattgacagg cgatagctgc cgggacttct ttcttccatt cttactcccg ccactgtgtt
     3601 catcacaggt acgagcgact tttcatcgaa acgctcgagt tgggttttat ttaatagcgc
     3661 gatcgctgct ggtgcgtctt tccattttga tgaaccgccg aatgcagtga ctgtcactga
     3721 ttcgagtgtt gcggtgtctc catttctttt tgaagaatca atttgtgagg atgcaggaat
     3781 tgaaagcaga aagtaaaaga caacaattaa gaacgtccgc aagcgtttgc tgcagatgaa
     3841 acgcgcaact gttcgacaat cccgaaataa atttgggaca aactttagca aagcatcata
     3901 gtagtaaccc agattagaca aacaaatact tcccttttat gaacgcgaag ttaatactcc
     3961 ctttagggca cgggcctcct ctctacttct tcatatacat cacttccttc acgagcttta
     4021 cagtgcgggg aatatcggga aggtatgctg caacaagatt gggtgcgtag tgcatgggcg
     4081 catcggcagt cgtaatccgg cgaaccggtg catcaagata atcgaagcct tctttctgaa
     4141 ttcgataagc aagctcactg gctactccac acatcggcca ttcttcagcc actataacga
     4201 gccggtttgt cttcttcacg ctttccaaaa ccgtgtacca gtcgagcggg cggatagttc
     4261 gtaagtcgat cacttcggca cttacgtctt ctttttccaa ctcggcggcc gcaccgagcg
     4321 caactttcat cagtttatta aatgacacga tcgttacatc accgcctggc ctctttatgt
     4381 cggccttacc gagttcaata taatattcgt cttcgggcac ttcgctttta tcaccataca
     4441 ttacctcgct ttccatgaag ataacaggat cttcttcgta acgaatagac tgtttcaata
     4501 agcctttcgc gtcatagccg ttagaaacgg aaacgacttt tagcccggga atatttgcat
     4561 aaatgttttc aaaggcagtg gaatgttgtg cccccaattg acctgcactt ccattagggc
     4621 cgcggaacac gatagggcag ccgatctgtc cgccgctcat tgcgagcatt tttgaagcgg
     4681 tattcaaaat ctggtccaga gcgagcacgg caaaattcca ggtcataaat tcaacgatag
     4741 ggcgcaaccc attttgcgca gctccaacag cgacccctga aaatcccagt tctgaaatag
     4801 gcgtatcaat aattcgctta ggcccgaatt cggcaagcat gccctggctt actttataag
     4861 cgccgttata ttcagcaact tcttcaccca tcaaaaaaac gcggt
//
LOCUS       DASQJI010000039         9764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1692139,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000039 DASQJI010000000
VERSION     DASQJI010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9764
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692139"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VEV83_01240"
     CDS             <1..493
                     /locus_tag="VEV83_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43761.1"
                     /translation="IAQEVDAAAQKINYDFSGIDKTGAIWGLRYSEFVMPLIKAVQEL
                     SAENTELKSRLDKIEALLSTQAQPQTNTSAQNSAAINARLEQNSPNPFTSETTIRYSL
                     PANTQNAYINFYASSGALLKSVKVAALGGSIRVSSSELPKGVIQYSLVIDGKIVDTKE
                     LMH"
     gene            1548..1877
                     /locus_tag="VEV83_01245"
     CDS             1548..1877
                     /locus_tag="VEV83_01245"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYK43762.1"
                     /translation="MKIEYNNLYTHFIFTTLHRQPIIAEKHRRRIEKYLTGIARHNYS
                     QLYCIYANPEHMHFLLSKSPKLSEERIATTIAESSQKFIHQNRLCGREFAWQETASAF
                     SVSKGRR"
     gene            2190..3665
                     /locus_tag="VEV83_01250"
     CDS             2190..3665
                     /locus_tag="VEV83_01250"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HYK43763.1"
                     /translation="MKPTNIIALLAGPAAFFVTFFFADLSPGHPEVTRMAAVTLWIAI
                     WWLTEATHVSVTALLPFLLIPLLGIADTKLVAAQYMDQTIFLFIGGFLLAFAIERWNL
                     HQRIALSILSKLGRSPSTMLAGVMMTTFFISMWVSNTATTMMMISAVLAVILEIEKHN
                     ISDIQKNSTAKALLLGLAYAASIGGMATVIGTPPNIVFYKIYLDTYPNANNMDFFYWF
                     VVAFPLALLLLVAAFFILKKLFLRRTKQIVFDTNQFNIMRHKLGKMSWEEKVVSIVFV
                     ITILLWFTRADIDFGSFELKGWNRIFGAEAPYITDSTVAIAMAVLLFVIPSKNEKGKM
                     LMSWEEAKKLPFGMIILFGSGFALSKGFEESGLSNWLALHLLFLKHAAPILIIGGICA
                     IVCLISELASNTASVQLVLPILIATQKATGLLPLMLMVPATLAASLGFMLPVATAPNT
                     IVYGTGRIRPADMRNAGSLLNVAGIIIITFVSMVIGIRLWK"
     gene            3676..3939
                     /locus_tag="VEV83_01255"
     CDS             3676..3939
                     /locus_tag="VEV83_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43764.1"
                     /translation="MNNEVILPYSSLIICSKEHTDMDATDIHGWKINPWRSVPRVRLA
                     SAQHSRRPYYPSSINSYKTSIHCFRPIKNPFHFCNHFISQHTY"
     gene            4017..5042
                     /locus_tag="VEV83_01260"
     CDS             4017..5042
                     /locus_tag="VEV83_01260"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HYK43765.1"
                     /translation="MSQLKISRLYLFLLLFSLTNVKATAQNTFIYTSDDRPVMRRKEL
                     ITTCLESFHADRNDTAALAICECQLDNLNRRFSYKQYKKYNHGGLIDIQALLDEDTVV
                     KKAVQNCFTNSNRTMLIQAQGFENDFMDSCFQNIRRNTNKNLDDGNVRNFCSCQLNLI
                     KTKKLSDAKLRELDNPNSLLFYEVMYACGDPFREKGEVTSDWTKDAKNDITGPEVDTV
                     SIITINGLSYVEIKMGSLVQYWLFDTGASDLLINNDMEKTLLQEGVLTQQNYLGTGEY
                     EMANGIVDTCRKYMVKNTSIGKYIVDNVVVAVTDKGKRIIVGRSLLNKFNNWKLDNEK
                     NLLILNK"
     gene            5382..5921
                     /locus_tag="VEV83_01265"
     CDS             5382..5921
                     /locus_tag="VEV83_01265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK43766.1"
                     /translation="MVEAADEKIMYRVKDGQLPELTQLFDRYSTAVYNFFLKLTMDTG
                     ASEDLTQNLFYRIIRYRHSFNAGNGSFKSWMYQMARNLHADYCKEKMRLAQIVANVHN
                     YPEDVADKHDGFAEQDFEKLKKALEGLGPVDRELIVLSRYQGLKYAEIAKMKNMTLSS
                     IKVQIHRALKELRTLYFKQ"
     gene            5918..6748
                     /locus_tag="VEV83_01270"
     CDS             5918..6748
                     /locus_tag="VEV83_01270"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HYK43767.1"
                     /translation="MKEVTMQCYEAESLLIDYLDNQLHPGDKVPLEQHLQGCPSCRQT
                     LEEYRTLFATIESDKAEKPGPALREKFENMLQSEINVESTARIVEMEKERNDRKIIPL
                     KRTSILFRIAASIVLIASGIFIGSFFIVNRTNGNDEVADLKNEVNEMKETLMFNGLTE
                     ESASERIKAVSYADDMHDPDNKIVTALINTMNEDKNVNVRLAALYAIAKFSDNSAVTN
                     ALIASLSKQTEPLMQIALINILTEKKETKAKEPIKQILQDKNTLPPVKEIAQKGLQLL
                     "
     gene            6921..7700
                     /locus_tag="VEV83_01275"
     CDS             6921..7700
                     /locus_tag="VEV83_01275"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYK43768.1"
                     /translation="MKPLKYLLSLGLVVISASALHAQEYKISVQNTKDGKLSLNDFPN
                     DLPVEGYSGTEIIVTSDLPGKAPERAKGLQPVYAGGTDNTGIAVNVEKNGNQVTLQCL
                     LPITKSASYKIKVPDNFNIEINNECGHSGDVHVQNVKGEVAVENCQSIDVKNVSGPLV
                     LSTISGNIDIAFTTIATDRPISLASVSGDIDVTVPVKLGLDVELETVSGAIYSDFDFS
                     AEDKKLKRIGGNSIKSQLNGGGASVKITNVSGNIYFRKAQQ"
     gene            7871..8518
                     /locus_tag="VEV83_01280"
     CDS             7871..8518
                     /locus_tag="VEV83_01280"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYK43769.1"
                     /translation="MKNIIILLILCTCSCFTHAQKIVEKHMAFSQQKSINLDIQIADS
                     IRIVTWNKSEVYAKASIDINDNKDNEVYVTNFDEKGNSIEVKAEFDDKKKAGYNDSCH
                     CCCNYNSKIYWDIYIPEQSSFSVETIDGNIVIQGNTKEIKAHSISGFIDLSFASSRKA
                     DLDMSTVSGTIYTNLALNDASKRNGGNNVRTQYNGGGEDVELETVSGDIFLRKAE"
     gene            8806..>9764
                     /locus_tag="VEV83_01285"
     CDS             8806..>9764
                     /locus_tag="VEV83_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43770.1"
                     /translation="MRKTFLILALATISSANFFFSPVSRRGHASEVEQFFRQGLDTTI
                     NKLLALEAAVQNNRSDKFLRQSFLNARSAYKQIEFLLEYYYPYLVRTVNGPALPFADG
                     ENSLAVLPPQGFQVIEELLFPTYNIHNSTELLREAALLKQILLDIRDQKDPYGFQDKY
                     VWDAMRLEMFRLIGLGISGFDSQSAENSVAEAAAVITSLKHILHFYSGDIHDSALVHE
                     LDDKIASALKYLDANKNFNSFDRLTFIRSYGNPLSEMLALCTEKLNYNLPSERRLLSP
                     SASNLFSYSFYNPSVYSPNEEANATADKILLGKKLFFDNILSA"
BASE COUNT         2964 a         2062 c         2107 g         2631 t
ORIGIN      
        1 tattgcgcag gaagtggatg ctgcggcaca aaagatcaac tacgatttta gcggcataga
       61 taaaacaggc gcgatctggg gattgcgtta cagcgaattt gtgatgccgt tgataaaagc
      121 cgtgcaggaa ctttcagcag aaaatacaga attgaaatca agactcgata aaatagaagc
      181 actattatcc acgcaggctc agccacaaac aaatacatct gcacaaaaca gtgccgccat
      241 aaatgcaagg ctcgagcaaa atagcccgaa tccatttact tcggaaacaa cgatcaggta
      301 tagcctgcct gcgaacacgc aaaatgctta cattaatttt tatgcatcgt caggtgcatt
      361 gttaaagtcg gtaaaggttg ccgcgttggg tggaagcatt cgtgttagtt catccgaatt
      421 gccaaaagga gtaattcaat attcgttggt tattgatgga aagattgttg atacgaagga
      481 actaatgcat tgaagtttgg ttgtaaggta ttcctcttat gaaatggaca gcagttattg
      541 cttgtgttta gaaggagaaa agctttagca cccgggatgg acagcttaag ttatgcatgg
      601 aaaattattt tccgtaccca cccgcccaat tgataaggtt tataaggttg tgggatacca
      661 tacaatcttt ctactaaggt tgataaggtt tgcaatactc gttgaactca ggggatattc
      721 gctcgctgtt ttatgtgcgt ctgagtaggt tttctgcgtt gaattagttc tgacggtaac
      781 cgttttgtga gattgaccaa cagttattgc ttgcctagaa cgaagaactt cagcaccggg
      841 gatgagcagc ttaagttatg ccaaggaaaa ttatcttccc gtacggagct gccaaattga
      901 taaggtttat aaggttgtgg tctaccataa aatctttcta ctaaggttta taaggtttgc
      961 aacactcgtt gaactcacca aggatattcg ctcggcctat tctgatgtgc ctctgaatag
     1021 gttttgatgc attgaattag ttgtgacggt atcggcagat tgaccaactg ttattgcctg
     1081 cttaagacga aaagttcagc acgcaaaaca agtagcttaa gttgtgcagc taaaaattta
     1141 tttgtgcgcg aaccttggca aattggttgt ggtctacctt gtgtccaaat acacccggca
     1201 gccttctgta caactcgact taagagtttt catgaggtaa actttacccc ccgtttatcg
     1261 aaagcaaaca ctgtgtcgca tatcaaaatt gattagattt acaaccttat caaccttagt
     1321 acaacacgtt caaagccaat ctatcaacct tataaacctt atatcatgaa aatcgaatac
     1381 aacaacctgt atacaactga actcaagatg ttgttatcag ctagacgtta gccctccatt
     1441 aatcgaaggc aaccatgtcg catatcaaaa ttcattaaat ctataacctt atcaacctta
     1501 ctacaaagcc tgcaaaccca atccatcaac cttataaacc ttatgtcatg aaaatcgaat
     1561 acaacaacct ctacacgcac ttcatattta ctactttgca tcgtcagcca ataatagctg
     1621 aaaagcacag aagacgaatt gaaaaatatc ttacaggcat tgccaggcac aattactcac
     1681 aactatactg catttatgcg aatccggagc atatgcattt tctgttatcc aaatctccta
     1741 agctttcgga ggaacgtatt gctaccacta tagcggagag ttcgcaaaaa ttcatacatc
     1801 agaataggct ttgcggacgc gaatttgcat ggcaggaaac tgcgtcggca ttttctgtat
     1861 caaaaggaag acgttgacag agtttgcaag tatattctta accaaccgga ccatcatcgc
     1921 aaggtaacct ttgaagaaga atataataag ttgatgaagt tttaccagac gccattgacc
     1981 ttgttcgcca cgaataaggc cgggtaaggt aatccgtaat tgggttatta agtcgcccgt
     2041 cgacaatacg gtttaatttt attcgacacc attaccgaca tggtattgcg ttctggtttc
     2101 tcattttcat acttgcagat ttctctcgac aaatcgggac aggataacaa tgagaatata
     2161 tctgtacttt gccctcttaa ccagactaat tgaaacctac gaatattatt gccctgcttg
     2221 ccgggccggc ggccttcttt gttacattct ttttcgctga tttgtctcct ggccatcctg
     2281 aagttacgag gatggcggcc gtcacgctat ggatcgctat atggtggcta acagaagcaa
     2341 cccacgtttc agtgacggcc ctgcttccct tcctcctcat tcctttactc gggatcgcag
     2401 atacaaaatt ggtcgcagca caatacatgg atcaaaccat ctttcttttc ataggcggct
     2461 tcctgcttgc ctttgccatt gaacgatgga acctgcatca gcgcatcgca ttatctattc
     2521 tttcaaaact tggaagaagt ccgtccacga tgcttgcagg cgtcatgatg accactttct
     2581 ttatttcaat gtgggtctcc aacacggcga ccaccatgat gatgatctcg gctgtactgg
     2641 cagtaattct cgaaatcgaa aagcacaata tttcggatat acaaaaaaat tctactgcaa
     2701 aggcattact gctaggcctc gcttatgccg cttccattgg cggaatggca acggtgatag
     2761 gcacgccgcc aaatatcgtt ttctataaaa tttatctcga cacgtatcct aatgccaaca
     2821 acatggattt cttttattgg tttgttgtag catttcctct tgctcttctc ctgctggtcg
     2881 cagcattctt tattcttaag aaattattcc tgcgtcgaac gaaacaaatt gtatttgaca
     2941 cgaatcaatt taatatcatg cgacacaaac tgggaaaaat gtcatgggaa gaaaaggttg
     3001 tgtcaattgt cttcgttatc accattctct tatggtttac acgtgctgat attgatttcg
     3061 gcagttttga attgaaggga tggaatcgca tcttcggtgc cgaagcaccc tatattactg
     3121 atagtacagt ggccattgcg atggcagttc tgctgtttgt tattccatca aagaatgaga
     3181 aaggaaagat gctgatgagc tgggaagaag caaaaaaact tccattcgga atgatcatct
     3241 tattcggaag tggttttgct ttgtcaaaag gttttgaaga atctggttta agtaactggc
     3301 tcgcgttgca cttgctcttt cttaaacacg ccgcacctat tctcattatt ggcggcattt
     3361 gtgcaatcgt ctgcctgatc agcgagctgg cttcaaatac ggcaagcgta caactggtat
     3421 tgcctattct tattgctact caaaaagcaa ctggtctgct accgctcatg cttatggtgc
     3481 ctgcaacact agctgcttcg ctcggattca tgctgcctgt ggctactgca ccgaatacga
     3541 tcgtatatgg caccgggagg atcaggccgg ccgatatgcg caatgccgga tccttgctca
     3601 acgtcgctgg cataatcatt atcacatttg tttcgatggt gattggaata cggctttgga
     3661 aatgaaaaat gagtgatgaa taatgaggtg atcctgccct actcatcact catcatatgc
     3721 agcaaagagc acacggacat ggatgcgaca gatattcacg gatggaaaat caatccctgg
     3781 cgttccgtgc ctcgcgttcg cctggcttcg gcgcagcaca gccgcaggcc gtattatccg
     3841 tcttccatca attcttacaa aacgtctata cattgtttcc gtcccatcaa aaatcctttc
     3901 catttttgta accattttat ctcgcagcat acttattaat atatgcgaac gtgaacttag
     3961 acctgcctca tgtttcatta caaacggtta actttagcag taactgcatc tatcatatgt
     4021 cccaacttaa aatttcaaga ctgtaccttt tcttattact attttcttta accaacgtaa
     4081 aagcaactgc tcaaaatact ttcatatata catcagatga tcggccggtg atgcggcgga
     4141 aagaattgat cacaacttgc cttgagtcat ttcacgcgga tagaaatgat accgctgctc
     4201 ttgcaatttg tgagtgccaa ctggataatc tcaatcggcg tttttcttat aaacaatata
     4261 aaaaatacaa ccatggtggc ttaatagata tacaggcact attggacgag gacacggttg
     4321 tgaaaaaagc agtgcagaat tgttttacca attccaacag aacgatgctg atacaggcac
     4381 agggttttga aaatgacttc atggatagct gttttcaaaa cataaggcgc aatacaaaca
     4441 aaaatttaga cgacggcaat gtgaggaatt tttgcagttg ccagttgaac ctgattaaaa
     4501 caaaaaaact ttccgacgca aaattgcgtg agctggataa tcctaactcc ttgctttttt
     4561 atgaagtaat gtatgcatgc ggagacccgt tcagggagaa aggtgaagtg accagcgact
     4621 ggacaaaaga tgcaaaaaac gatattaccg gtcctgaggt tgacaccgta agcattatca
     4681 ctataaacgg gctctcttat gttgaaataa aaatgggaag tttagttcag tactggctgt
     4741 tcgataccgg cgcttcagat ctgttgatca ataatgacat ggaaaagact ttgctgcagg
     4801 agggtgtgct cacgcagcaa aattacctgg gtactggtga atacgaaatg gcaaacggta
     4861 ttgtagatac ctgccggaag tatatggtta aaaatacaag cattggaaaa tatatagtgg
     4921 ataatgttgt agtggcggta actgacaaag gcaaacgaat aattgtgggt agatctctac
     4981 tgaacaagtt caacaactgg aagcttgata atgaaaagaa tcttcttatt ctgaataaat
     5041 aaaggtgcga aaagtgagat tcgagtacgg gcccgataaa ttagtgatca gtgtcccctc
     5101 actcatcatt catcgaacta ttcgacactc tacgcgtcgg tcttggcagc aaagttttca
     5161 cactcttcga atacttatac aaagcacagg cacagcccgc tcaatcaact tcataacgat
     5221 gaaatgattt gggccagatc aagtctgcgg caggctcgta gccagtgcca taaaaaacag
     5281 cagcccgtat ccaaaatata tcctctcaaa aaaaatctct ctctttttgt aaccatttta
     5341 cctttccgca gtattcatta tagcgaatat aaatttcacg cgtggttgaa gcagcagacg
     5401 agaaaatcat gtatagggta aaagacgggc aattgccgga gttgacgcaa ttgttcgacc
     5461 gctacagcac ggccgtatat aatttttttc taaagctgac gatggacacc ggcgccagcg
     5521 aagaccttac gcagaattta ttttaccgca tcatccgtta ccggcacagc ttcaacgcgg
     5581 gcaatgggag ttttaaatcc tggatgtacc agatggcgag gaacctgcat gccgattatt
     5641 gtaaagagaa aatgcggctt gcccagatag tcgctaacgt gcataattac ccggaggatg
     5701 tcgcagacaa acacgatggc tttgcagaac aggattttga aaaactaaaa aaagcgctcg
     5761 agggattagg tccggtagac cgtgagctga tcgtattaag ccgctaccag ggattgaaat
     5821 acgcggaaat agccaagatg aaaaatatga cgctgagctc gataaaagtg cagatacatc
     5881 gtgcgttaaa agaacttaga acactttatt tcaaacaatg aaggaggtta ccatgcaatg
     5941 ttatgaagca gaatcattgt tgatagatta cctcgataat caactgcatc ccggcgacaa
     6001 ggtgccattg gagcagcatt tgcaaggatg cccatcatgc aggcaaacat tggaagaata
     6061 caggacactg tttgctacga tagagagcga caaagcggaa aaaccggggc cggcgcttcg
     6121 cgaaaagttt gagaacatgc ttcagtcgga gataaatgtt gagagcactg cgcggatagt
     6181 agagatggaa aaagaacgta acgatcgtaa aataataccg ctcaaaagga cttcgatact
     6241 ctttagaata gcggcgagta ttgtactgat cgcatccgga atttttattg gatccttctt
     6301 catcgttaat cgcacaaatg gtaacgatga agtggcggac ctgaagaacg aagtgaacga
     6361 aatgaaagaa acactcatgt tcaacgggct cacggaagaa tcagcgagtg agcgcatcaa
     6421 ggcagtgagc tatgcagacg acatgcatga tccggataac aagatcgtta cagctctcat
     6481 caacacaatg aatgaagaca agaacgtaaa tgtgcggctg gctgcgctgt atgctattgc
     6541 aaagttttct gataattctg cggttacaaa tgcactgata gcatcgctaa gcaaacaaac
     6601 cgaaccgcta atgcagatcg cgctcatcaa tattcttaca gagaaaaaag aaacgaaagc
     6661 caaagaaccg atcaagcaga ttttgcagga taaaaacact ttgcctcctg taaaagagat
     6721 cgcgcagaaa gggcttcagc ttttgtaaag cgtcgcagat tcctggttag aatgcttccg
     6781 cttccgtaga atgaaggtca ctctaaatga cagcggccgg ccatgactgt cagttagatc
     6841 ccgccttgcg gaagagagat ctgcaacgca aataacgccg gcaattgcca ggaaaattta
     6901 ttatttaaaa aaaaagaaaa atgaaaccat taaagtattt actatcgtta ggcctcgttg
     6961 tcatttccgc ttccgctctt cacgcacagg agtacaagat cagtgtgcag aatacgaaag
     7021 acggaaagct ttcgctcaat gattttccta acgacctgcc ggtagaaggt tacagtggca
     7081 ctgagatcat cgttacctca gacctgccgg gtaaggcgcc cgaaagggcg aaaggacttc
     7141 aaccggttta tgccggcgga actgacaata cgggtattgc cgtgaacgta gaaaaaaatg
     7201 gcaaccaggt aacgctgcaa tgtttactgc ccattacaaa gtcggccagc tataaaatta
     7261 aagtgcccga taattttaat atcgaaatca ataacgaatg tggccattcg ggcgatgtac
     7321 atgtacaaaa tgtaaaaggg gaagtggctg ttgaaaattg ccagtcaata gacgtgaaaa
     7381 atgtttcagg tccattggtg ctgtcgacga tcagcggaaa catcgatata gctttcacaa
     7441 cgatcgctac tgaccggcca atttctcttg catcagtaag tggcgacatc gatgtaaccg
     7501 tgccggtaaa actcggactt gatgtagaac tggaaacagt ctccggcgcc atttattcgg
     7561 attttgattt ttccgcagag gataaaaaat tgaaacgtat tggtggcaac agcataaaaa
     7621 gccagttgaa cggcggcggc gcaagtgtga agatcacgaa cgtgagcggc aatatttatt
     7681 tcaggaaagc acagcaatga tgagatgagt gatgaatgat gagtaatgag tggtgatacg
     7741 ttgctgtcat ttcgagtgac tatgaatgca gctcaccttc caacgagaat tcttcaacgc
     7801 aacattatca tttttctacc atcatccgtc aactttcatc ttctttcaaa cacaacgaaa
     7861 aaaggtaaac atgaaaaata taatcatact tctcatacta tgcacgtgca gttgttttac
     7921 gcatgcgcag aagatcgttg aaaagcacat ggcgttttcg cagcagaagt cgataaacct
     7981 cgacattcag atcgcggatt cgatcaggat cgttacatgg aataaaagcg aagtgtatgc
     8041 caaagcttca atcgacatta acgataataa ggacaacgaa gtttacgtga ccaacttcga
     8101 cgagaaaggg aacagtatag aagtgaaggc agaatttgat gataaaaaga aagccggtta
     8161 caatgattca tgtcattgct gctgcaacta caatagcaaa atatattggg acatttatat
     8221 tccggaacaa tcttcgtttt ctgtcgaaac gatcgatggc aatatagtga tccagggcaa
     8281 cacaaaagaa ataaaagccc attctatcag cgggtttatt gatctgagtt ttgcttcttc
     8341 ccgaaaagct gatttggaca tgagcaccgt cagcggcact atctatacga acctcgccct
     8401 gaacgatgct tcaaagagaa acggagggaa caatgtgaga acacaataca atggcggcgg
     8461 cgaggatgtg gaactggaaa cggtgagcgg ggatatattc ctgagaaagg cggaatgagg
     8521 gaatgagaaa atgagtaatc aataatcagt gatcagtaat gtgtaaaagc gaaaaggatt
     8581 cggcctgaaa gttttctctt cgctgggtcg cctggttcaa agccccttaa tcatttcacc
     8641 tgtgttgcac gatgaggcgg cctttggtac agatcgtaaa ggatttgatt ttcttatccg
     8701 cgaagatccg tcggatctgt gttatccgtg tgcattgttt ttcgcttccg tgttccgttc
     8761 cctcattcta cctaatttcg tttggggtga aaccaaatgt aattagtgag aaagacattc
     8821 ttaatactgg cgctggcaac aattagctca gccaactttt ttttctctcc tgtttccagg
     8881 cgcgggcatg cctcagaagt cgaacaattt ttcaggcaag gacttgatac gaccataaac
     8941 aaattactgg cccttgaagc ggcggtacaa aacaatagga gcgacaaatt tcttcgacaa
     9001 agttttctga acgcaaggtc agcgtataag caaatcgaat ttttactgga gtattattac
     9061 ccttacctcg tgcgtaccgt aaacggacct gcacttcctt tcgcagacgg cgaaaattcc
     9121 ctcgccgtat tacctccgca gggcttccag gtgatcgagg aactgttgtt ccctacgtat
     9181 aacatacaca actcaacgga attgttgcgc gaggctgcgt tgctcaaaca aatactcctg
     9241 gatataagag atcaaaaaga cccttacgga ttccaggata aatatgtatg ggatgctatg
     9301 cgtttggaaa tgttccggct cattggctta ggcatcagtg gttttgattc gcagtcagcg
     9361 gaaaattccg tcgcggaagc tgcagcagtg ataacttctt taaaacacat cttacatttt
     9421 tattccggcg acatacatga ttcagcgctt gtacatgaac ttgacgacaa gatcgcgagt
     9481 gctctcaaat atttagatgc aaacaaaaac ttcaactctt tcgacaggct cacgtttatt
     9541 cgctcctatg gaaatcctct ttctgaaatg ttagctctgt gcacagaaaa attaaattat
     9601 aatttaccat ctgaaagaag attgctttca ccatctgctt ctaacctttt ttcatattcc
     9661 ttttacaatc ccagtgtgta ttctccgaat gaagaagcaa acgcaacagc ggataaaata
     9721 ttactcggca aaaaattatt ctttgataac attctctctg caaa
//
LOCUS       DASQJI010000040         3692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_770931,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000040 DASQJI010000000
VERSION     DASQJI010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770931"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VEV83_01290"
     CDS             <1..1185
                     /locus_tag="VEV83_01290"
                     /inference="COORDINATES: protein motif:HMM:NF027814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 27 protein"
                     /protein_id="HYK43771.1"
                     /translation="TIIFLSAALQLHAQKFEGLALTPPMGWNSWNTFNTKISEDLVKH
                     TADIMVSSGMKDAGYVYLVLDDGWMSKERDKNGNLVADPEKFPHGMKAVADYVHSKGL
                     KFGLYNCAGTLTCAGYPGTRGYEYQDARLYASWDIDYLKFDWCNTDGINAKEAYTTMS
                     KALKTAGRPIVFSLCEWGTNKPWEWAAPVGHLWRTTGDITAQFDSLRNEGTWVSNGTM
                     WIVDMQVGLQKYAGPGHWNDPDMLEVGNGMKPSEDRAHFSMWCMLAAPLMAGNDITKM
                     SQASRDILTNKDAVTIDQDPLGVEGFRYTAANGLEVWAKPLSNNNWAICFLNRSSSPQ
                     KINFDWQKENIYDSVSKQQFNASASYKIFDVWSKKNLGNTSSPLSAEVPSHDVLMVKL
                     SR"
     gene            1463..2131
                     /locus_tag="VEV83_01295"
     CDS             1463..2131
                     /locus_tag="VEV83_01295"
                     /inference="COORDINATES: protein motif:HMM:NF018749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1349 domain-containing protein"
                     /protein_id="HYK43772.1"
                     /translation="MHKDLYTAGFLLCMLVTQAAFAQNAPVHLPPIPFELSWENSPAS
                     YEVSGNTLKIVAGAKTDMFRDPNVTYNTDNAPKLLFKPDQDFVFIASIEHAFASKWDG
                     GAIVLKKDSLNWIKFCFEKDYTGARRVVSVVTKNISDDCNSVEITSNKVFYKMAKADN
                     VITLYYSVDGRKWFLVRHLQFDVNGDFYLGFLAQSPTGERCEVNFSDISYEAKKIEDP
                     YAGE"
     gene            2508..2969
                     /locus_tag="VEV83_01300"
     CDS             2508..2969
                     /locus_tag="VEV83_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK43773.1"
                     /translation="MIKVTRTNSDHPDFISLVKLLDDDLAKRDGDEHSFYAQFNNIDT
                     IKHAVILYEDEKPVACGAIKQYAEHVMEVKRMYTLPVYRGKGIATIVLNELEKWAAEL
                     GYANCILETGKRQPEAISLYTKNGYMIIPNYGQYAGVENSVCFEKAISSTV"
     gene            complement(3348..>3692)
                     /locus_tag="VEV83_01305"
     CDS             complement(3348..>3692)
                     /locus_tag="VEV83_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43774.1"
                     /translation="QLKARLDLIEQKLGLTSGTGNSTGVTLDKATLEQNVPNPFNHPT
                     TIGYTLPQHYSSAKIIVTDKSGKVLKEMNLSGSGKGTLAVDAATLSSGVYQYSLYVNG
                     RLIDTRQMIKGK"
BASE COUNT         1069 a          755 c          866 g         1002 t
ORIGIN      
        1 acaataattt ttctttctgc agccctgcag cttcacgcgc aaaaatttga aggcctcgct
       61 ctcacgccac cgatgggctg gaatagctgg aatacattca acaccaaaat aagcgaagac
      121 ctcgtaaaac atacagcaga cattatggtt tcgtcgggga tgaaagacgc gggctacgta
      181 tacctggttt tggatgatgg ctggatgtcg aaagaacggg acaaaaatgg caacctcgtc
      241 gccgatccgg aaaaatttcc acacggcatg aaagcagttg cagactatgt gcattcaaaa
      301 ggtttaaagt tcggattata caattgcgcg ggcacactca cctgcgcggg ctacccggga
      361 acacgcggat acgaatacca ggatgcgcgc ctgtacgcat catgggatat cgactactta
      421 aaatttgact ggtgcaacac agacggcatc aatgcaaaag aagcatacac aacgatgagt
      481 aaagcattga aaactgcggg ccgcccgatc gttttcagct tgtgcgaatg gggaacgaat
      541 aaaccgtggg aatgggcggc gcccgtcggg catttgtggc gcacgaccgg agacatcact
      601 gcccaatttg attctcttcg caatgaagga acgtgggtgt ccaacggaac gatgtggatc
      661 gtcgacatgc aagttggttt acagaagtac gcaggccccg gccactggaa tgaccctgat
      721 atgctcgaag taggtaatgg catgaaacca agtgaagacc gcgcacactt tagcatgtgg
      781 tgtatgctgg ctgctccgct gatggcggga aatgacatca caaaaatgtc gcaggcatca
      841 cgggacattt tgaccaacaa agatgcagtt acgatcgacc aggatccact cggtgtggag
      901 ggttttcgtt acaccgctgc aaacggactt gaagtgtggg cgaaaccttt atcaaataat
      961 aactgggcca tttgttttct gaaccgcagt tcgagtccgc aaaaaataaa cttcgactgg
     1021 cagaaagaaa atatttatga cagtgtttcg aaacagcaat tcaacgcatc ggcgtcttac
     1081 aaaattttcg atgtgtggag caagaagaat ttgggtaaca catcgagtcc cttgagtgca
     1141 gaggttccat cgcatgatgt gttgatggtg aaattgagta ggtgaatggt gaattgcgtg
     1201 gtgtatgaat tgtgaatggt caatggcgat tgaacaacga cgcatgattt ctgatgtaag
     1261 agaatttatt tgtgaatcct ttgcacatca atgagaacgc gctaaaaaat tcctcttgca
     1321 catgtgaaca tcaaacaaac aagttatccg ggcaacaatc cattaaaatc cgtgccctaa
     1381 ggccgtgtca tccgtgttct ataaaatcgc ctgggtggcg agcattcacg ttggatctaa
     1441 tctcaaaact tgaaaattaa ttatgcataa agacctttac accgctggtt ttcttctatg
     1501 catgttggtt acgcaggccg cgttcgcaca aaatgcgccg gttcacctcc ctcccattcc
     1561 gttcgaattg tcatgggaaa attctccggc gagttacgaa gtctccggca ataccttaaa
     1621 aattgtggca ggcgcaaaaa cagacatgtt tcgtgatccg aatgtgactt ataacaccga
     1681 caacgcgccg aagcttttat ttaaaccgga ccaggatttt gtttttatcg cctccatcga
     1741 acatgcattt gcaagtaaat gggacggtgg cgcgatagtg ttgaagaaag atagtttgaa
     1801 ctggataaag ttttgttttg aaaaagacta caccggtgca aggcgagtcg ttagtgtggt
     1861 aacaaaaaat atttccgacg attgcaactc ggttgagatc acgtccaaca aagtgtttta
     1921 caaaatggcg aaagcggata atgtgatcac actctattat tcggtggatg gaagaaagtg
     1981 gtttttagta cggcatttac aatttgatgt caatggagat ttttatcttg gcttcttagc
     2041 gcaatcgccg accggtgaac gatgtgaagt gaatttttca gatattagtt acgaagcgaa
     2101 gaagatcgag gatccatatg cgggggaatg agaattgatg gtaaattgtg aatttgtgaa
     2161 ttgtaaatgg tgagtggtga atggctgttg agaatcgatg agcgatttcg aaatgcaatc
     2221 tttattaatg cttgaaaatg aaactcggcg acaatcaagt ccaacatggc acgaactaaa
     2281 ggagcaatgt atctaaacat gagaaatcta agaattaatt gagcggcact tcgtataact
     2341 tggcgcctca gagcctttgt ggttttgatg cttcgaccca cgaacatttc gaaggcgcga
     2401 aaacacgcgg agaaaaatgg ggccgaaaac cggagacttc agatctgcaa ctggtgaccg
     2461 taacttgtga cctgtaacca gcaacctgca acctgtaaca agatacaatg atcaaagtaa
     2521 cgcgcacaaa ctccgatcat ccggatttca tctctcttgt aaaattgctc gatgatgatc
     2581 ttgcaaaaag agacggtgat gaacattcat tttacgcgca attcaacaac atcgatacaa
     2641 taaaacatgc ggtgatcctg tacgaggatg aaaaaccagt ggcgtgcgga gcgataaaac
     2701 aatatgcaga acatgtcatg gaagtaaaac gcatgtacac attacctgta tatcgaggga
     2761 aaggaatcgc aaccatagtg ttgaacgaac tggaaaaatg ggctgcagaa ttgggttatg
     2821 caaattgcat tttggaaacc gggaaacggc aaccggaagc aatatcgctt tacacaaaaa
     2881 acgggtacat gatcattcca aactatggcc agtatgccgg cgttgaaaac agtgtgtgct
     2941 ttgagaaagc aatatcttca actgtgtgaa atcgtactca cctgccgtga tggttttgat
     3001 gttttgaacc accaggtctc gaaggcacga gcagaaagaa aaaaagcttg tgctttagaa
     3061 ttatagaata acacattaat ctttatcaaa agttattgac caaaccattg ccgttatcac
     3121 atgattgacg cgtgatgcca aagcagcagg tctaaaaacc ctgaaccttc tttcgctgct
     3181 tgtgttgtcc tcctggtccc ttggttttta tatttggttt ctttccttgg ctcttatttc
     3241 tttgttcttt ttcctggctt aaggttcttc ttttttggtt cttgtttctt gcttcttgtt
     3301 tcttggttct tgtttcttgg tttttgttat ttgttttttg aacctggtca tttgccctta
     3361 atcatctgcc tcgtatcaat caatcgtcca ttcacatata aagaatattg ataaacgcct
     3421 gatgaaagcg tcgccgcatc gacagccaaa gtgccttttc cactgccgga caggttcatt
     3481 tctttcaaaa cctttcccga tttatctgtt acaataattt ttgcggaaga atagtgttgc
     3541 ggtagtgtgt aaccgatagt cgttggatga ttaaacgggt taggaacgtt ttgttccagc
     3601 gttgctttat cgagcgtgac tcctgtagaa tttccagtgc cacttgttaa accaagtttt
     3661 tgttcaatca agtcaagtct cgcctttaat tg
//
LOCUS       DASQJI010000041         9413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1384999,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000041 DASQJI010000000
VERSION     DASQJI010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9413
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1384999"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..2881)
                     /gene="alaS"
                     /locus_tag="VEV83_01310"
     CDS             complement(197..2881)
                     /gene="alaS"
                     /locus_tag="VEV83_01310"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HYK43775.1"
                     /translation="MSSAEIRQRFLDFFKSKGHDIVPSAPIVIKNDPTLMFTNAGMNQ
                     FKDYFLGNKKPPFLRVADTQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFK
                     PDAIAWSWELLTEVYKIEKDRLYVTVFEGDAKEHLPADDEAFNEWKKWISEGRILFGS
                     KKDNFWEMGDTGPCGPCSEIHVDSRSDEERKVVDGKTLVNADHPQVIEIWNNVFIQFN
                     RLKDGTLQPLPAKHVDTGMGFERLVRVLQNKHSNYDTDVFTRTIEEIEKIVNKKYDYS
                     ESKEAIAFRVIADHIRAISFTIADGQLPSNTGAGYVIRRILRRAVRYYYSYLGYKQAL
                     LNQLVPVIGKQFENVFPELQKQADFVSKVVREEEDAFLRTLEKGIQKFDTWAKGIKSI
                     ALIDQVDTKTYEAAMKFPGEEAFELYDTYGFPVDLTELMAKEIGINGVEMDEFTKLMQ
                     LQKQRSRAATTVDTGDWVVVSDEHAQNEFVGYDSLEIKTKVVKYRKVKSKGKESYQIV
                     LEATPFYAESGGQVGDEGELIFSDGTSTQVTTIIDTKKENDLIVHYAAAIPNDLTGDV
                     IAKVDVAKRKSTEIHHSATHLLHAALRTVLGTHVEQKGSLVNAEHLRFDFSHFAKMTD
                     EEIRKVESLVNEKIRENIPVIIKLMPKEDAMKMGAMALFGEKYSDTVRVVVIDRTYSM
                     ELCGGTHVGSTGELGFFKIKHETAIAAGVRRIEAVSGLVAEELVNAQFEQLRLIREFL
                     KNPKDVSKAIENLSAENAELKRKLESAEAKQLSGLRDQLIRSAEDLNGVNFIGANVEV
                     SNAEALKKLCFEIKSQLANHIAVLTSNVNGKAAVAISIDEAVAEQKNLDAAKIIKEHV
                     APVIRGGGGGQKTLATAGGQDASNLARVIEVVRKLLIA"
     gene            3144..4115
                     /locus_tag="VEV83_01315"
     CDS             3144..4115
                     /locus_tag="VEV83_01315"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HYK43776.1"
                     /translation="MKKIKYYFNTHTLRYEKLVTPLRVKLLRVFAFFATAIVTAGILV
                     AIAFQYIDSPKAILLEQQNADLKNDYVLIQQQLNQLQQKMDELLKRDNNVYRSIFESS
                     PIPDSARLKEMEMSKEVQLVNSLSSSELLKSITAQLNDLTLLVAYQQKSFSDIENMVK
                     DKEKLLAAIPAIQPVSDKDLTRIASGFGMRIDPVYKVPKFHAGLDFTAPIGTPIYATA
                     DGIVTESGFSPDGYGNRVVINHGYGYESLYGHMYRTKVRNGQKIKRGEVIGYVGSTGK
                     STGPHCHYEVHKGGQAVDPVYFFYNDLSPEQYDRLLKLAQTANQSFD"
     gene            4168..4587
                     /locus_tag="VEV83_01320"
     CDS             4168..4587
                     /locus_tag="VEV83_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HYK43777.1"
                     /translation="MSKELDRPVRVLVAKVGLDGHDRGAKVIATALRDAGMEVIYTGL
                     RQTAEMVVNTALQEDVDAIGISILSGAHMTVFPKIIRLMKEKQMDDVLLTGGGIIPEE
                     DMVKLHEMGVGKLYAPGTDTREIAGDIRTWVKANRNF"
     gene            4596..4793
                     /locus_tag="VEV83_01325"
     CDS             4596..4793
                     /locus_tag="VEV83_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43778.1"
                     /translation="MAERRIKIFKSLEEQEMDFLEYFFDLTPSERLEALANLQKKNYG
                     REFLQKPQKKITLRKHFIYGY"
     gene            4894..5265
                     /locus_tag="VEV83_01330"
     CDS             4894..5265
                     /locus_tag="VEV83_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43779.1"
                     /translation="MTEDLDIWIAPTNENKESFLSTLRCMRYVEDEINLIKNEDFTTY
                     FVCRLGTRPHVIDVLTIVHSQLNFDEAEKNIVIHKVENNIELRIVPYDVLIETKLKSN
                     RPKDYWDVAKLDELRNLKNKK"
     gene            5262..6041
                     /locus_tag="VEV83_01335"
     CDS             5262..6041
                     /locus_tag="VEV83_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HYK43780.1"
                     /translation="MTYQTLLTSLDDNIYIITVNRPDKLNALNRTVIEELSSAVDEVY
                     SNDQIKSAVITGAGEKAFVAGADISEFLQLNADEGEALAKRGQQMVFDKIENSRKPIV
                     AAVNGFALGGGCELALACHFIIASDNAKFGQPEVNLGLIPGYGGTQRLTQLIGRNRAM
                     QLIMTGEMIKAEDAEKYGIVNKVVSQKQLLEEVKTILQVIHAKSPLAISKIIETINNF
                     DHTQQGYDFEMQKFGECFGTEDMKEGVHAFLEKRKPLFKGR"
     gene            complement(6117..7511)
                     /locus_tag="VEV83_01340"
     CDS             complement(6117..7511)
                     /locus_tag="VEV83_01340"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HYK43781.1"
                     /translation="MSEFIGHFHVALVHLPIGILLMALLLLWLRKNERYHISQQVLKI
                     ILLIGVVAALLSCVTGYILSTTDEYEKPLVVWHMWMGIAVAIVSMFLYMKLARQEFDS
                     IYKGLAVGLLLLIFVTGHLGGSLTHGTDYISLNFNSENFDTIKIRPIANVQQARAYAD
                     IIQPILQTKCYGCHSSKKQKGGLRLDKYELIMKGGKDGKIIVPGNPDTSDIIRRLLLP
                     TENEDHMPPREKPQPNDRQITLLHWWIENGADTTSKVKDMPQPPPIDKYLLALQADHI
                     EHKLPATVPQVAVEKADDKALEELKEKGVIVLPVAQNSNYLMANFVTASNISDKDLSL
                     LLPLKKQLVWLKLGDTNISDSAMTYVAQCENLTLLQLDSTNITDKGLQKLQTLKHLQS
                     LNLVGTNITDAGLASLKDLKQLQSIYLYETKVDKRDWIQLQRMFPKTVLDSGGYDVPL
                     FPNDTVVLKAKAYK"
     gene            complement(7548..7901)
                     /locus_tag="VEV83_01345"
     CDS             complement(7548..7901)
                     /locus_tag="VEV83_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK43782.1"
                     /translation="MRNFKKLQIWQKGFEIAVDTYKLIDGFPKSEKFCLGQQATKAAI
                     SIPSNIAEGSSRRSEKDYYRFIEISLGSSFELETQLLIAQAVDFGDKHLLSNTLNKID
                     EEQKMLVAFANRLCS"
     gene            complement(7965..8888)
                     /locus_tag="VEV83_01350"
     CDS             complement(7965..8888)
                     /locus_tag="VEV83_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK43783.1"
                     /translation="MKRRNFIELSASSAAAFMVSLDAFSSSYKPNFTVNKNFELKVLA
                     TNWGFGGTIDQYCAKVKQEGYDGIEIWWPTEKKEQDALFAALKANDLEVGFLTAGHES
                     RYEDHLNTFKNMVDAAAMNTVQKPLYINCHSGRDYFSYDQNKTFIDHTMQLAKDTGLK
                     ICHETHRSRILFAAPVARHYIDTIPGLRITFDVSHWCNVSESLLEDQQETVDLALQRV
                     DHVHARIGHPEGPQVNDPRAPEWDDAMKAHFAWWDKIVEIKKQQGDRLTILTEFGPPT
                     YMPTLPYTQEPLADQWAINVHMKDLLRKRYG"
     gene            complement(8921..>9413)
                     /locus_tag="VEV83_01355"
     CDS             complement(8921..>9413)
                     /locus_tag="VEV83_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43784.1"
                     /translation="SRTNAEIILYLYKSIRDAAGGMYLIGCNTISHLSAGMFELNRIG
                     DDTSGKEWERTKKMGVNTLGFRMVQHKTFYAVDGDCVGLTTAVSWEKNKQWMQLLAQS
                     SAPLFISAQPDAVGEEQKAFIKQCFADASKSQPVGEPLDWITNPQPAKWKLDGQVVNF
                     DWN"
BASE COUNT         2581 a         2137 c         1944 g         2751 t
ORIGIN      
        1 gtactgcgga agaatgatgt tctccaacgc tgcagttgtg ttctcgattg tgggcgctgg
       61 ttcatgaaca tatttgataa cattcgggtt gctgttaagg tcaaacaaaa gctgcacatc
      121 gttcagtgtg aattcacgaa aaagcagtcg tgatgattcg aagataatct tcatcaaaat
      181 tttttttatg cagccgtcac gcgatcaata actttctaac cacctcaatc accctcgcca
      241 aattacttgc atcctgccca ccggcggttg ccaacgtttt ttgtccgcct ccaccgcctc
      301 taataaccgg ggcaacatgt tctttgatga tcttcgcagc atcgagattc ttttgttcgg
      361 cgactgcttc gtcaattgaa atggcaacgg ctgccttgcc attcacatta gaagtgagaa
      421 ctgcaatatg atttgcaagc tgactcttta tttcaaaaca taacttcttt aatgcttctg
      481 catttgaaac ttcaacgttt gcgccgataa aattaacgcc gttaagatct tccgcgctgc
      541 ggatcaactg atctcttaat ccgctcagtt gttttgcctc tgcactttcc agttttcttt
      601 ttaattcggc gttctctgcc gataaatttt cgatggcctt gctcacatct ttcggattct
      661 tcaaaaactc acgaatgagc cgcaactgct caaactgggc gtttactaat tcctctgcca
      721 caagtccact cacggcttct atacggcgca caccagcagc aattgcggtc tcgtgtttta
      781 ttttaaaaaa gccaagttca ccggtcgatc caacatgcgt gcctccgcac aattccatcg
      841 aatacgtccg gtcgattacg acgacgcgca ccgtatcact atatttttct ccaaacaatg
      901 ccatagcgcc catcttcatc gcgtcttctt taggcatcag ctttatgata acaggtatgt
      961 tctcgcgaat tttttcgttg accaacgatt caactttccg gatctcttca tcggtcatct
     1021 ttgcaaaatg agaaaaatcg aaacgaagat gttctgcatt tacaaggctt cctttttgct
     1081 caacatgtgt ccctaacact gttcttaaag ctgcgtgcag caaatgcgta gcactgtgat
     1141 ggatttccgt tgacttgcgt ttggcaacat ctactttagc gattacatcg ccggtgaggt
     1201 cgtttggaat cgcagctgca taatgaacga tcagatcgtt ttcttttttt gtatcaatga
     1261 tggtggttac ctgagttgac gtgccgtcac taaaaatcaa ttcaccttcg tctccaacct
     1321 gtccgccact ttccgcatag aaaggagttg cttccaaaac aatttgatat gattctttcc
     1381 ccttcgattt caccttcctg tacttaacga ctttcgtttt tatttcgagt gaatcgtaac
     1441 ccacaaattc attttgtgcg tgctcatcac tgacgacgac ccagtctccc gtatcgactg
     1501 tggttgcagc acggctcctt tgtttttgta gctgcatcag cttcgtgaat tcgtccatct
     1561 ctactccgtt aattccgatt tctttagcca tcagttcagt aaggtcaacc gggaagccat
     1621 acgtatcata taattcaaac gcttcttcgc cggggaattt cattgcagct tcatacgttt
     1681 ttgtgtcgac ctggtcgatc aatgcaatgc tctttattcc ctttgcccag gtgtcgaatt
     1741 tttgtattcc tttctcaagc gttctcaaga atgcgtcctc ttcttctctt acaaccttgc
     1801 tcacaaaatc tgcctgtttt tgtaattcgg gaaatacatt ttcgaattgc tttccgatga
     1861 caggcaccag ttggttaagc aaggcctgct tatacccgag gtaggaataa tagtatcgaa
     1921 ctgctctgcg taagatccgc cttatcacat aacccgcgcc tgtgtttgaa ggaagctgcc
     1981 catcggcgat cgtaaaactg atcgcgcgaa tatgatcagc gatcacgcga aaagcaatag
     2041 cttctttgct ctcgctgtaa tcatattttt tgtttacgat cttttctatt tcttcgatcg
     2101 ttcgcgtgaa aacgtctgtg tcgtagttgc tatgtttgtt ttgaagaact cggacaaggc
     2161 gctcaaagcc catcccggta tcgacatgtt ttgccggcaa gggttgcaga gttccatcct
     2221 tcaagcgatt gaactggatg aatacattgt tccaaatttc gatcacctgc ggatggtctg
     2281 cattcaccaa tgtttttccg tcaacaactt ttctttcttc atcactgcga ctgtcgacat
     2341 gaatttcact gcaaggcccg cacggccctg tgtcccccat ttcccaaaaa ttatccttct
     2401 tgcttccaaa taagatccgg ccttcgctga tccatttctt ccattcatta aatgcttcgt
     2461 cgtctgccgg caggtgctct tttgcatctc cctcaaacac ggtcacatac agcctgtctt
     2521 tttcgatctt ataaacctct gttagtagtt cccaactcca ggcaattgcg tccggcttaa
     2581 aataatcccc aaagctccag ttgccgagca tctcaaacat cgtatgatga tatgtgtcaa
     2641 ctccaacttc ctctaaatcg ttgtgcttac cgcttacgcg caaacatttt tgcgtgtcgg
     2701 caactcttaa gaaaggtggt ttcttatttc cgaggaaata atctttgaac tggttcatgc
     2761 ccgcgttcgt gaacatcagg gttggatcgt tcttaataac gatgggtgcc gacggaacga
     2821 tatcatgtcc tttacttttg aaaaaatcca aaaatcgttg tcttatttct gctgaactca
     2881 taatcttttt gcgtgcgtac aaaacaatgg tcttgttcta ccgcaacctt tttacaaatt
     2941 attttctatt gataaaaatt acctttgaac taaaaaatca agggtctcaa aggtaagaat
     3001 tgccgtttta aggaaaatca ggcaaagtaa ttgctatatg gcaaacgcta ttacagagct
     3061 ctaacgaacc aggaggccat gctatttcac tcaaaaactt aatatccgca ccgatctatg
     3121 cgcaagacgg ataacgccgg ctaatgaaaa aaattaagta ctacttcaac acgcatacac
     3181 tcaggtatga gaaactggta acgccgctgc gtgttaaact cttgcgggtg tttgcatttt
     3241 ttgctactgc cattgtgacc gccggaatac ttgtcgcgat tgcctttcag tatatagatt
     3301 cgccgaaggc aatcctcctc gaacagcaaa acgctgattt gaagaatgac tatgttttaa
     3361 tacagcaaca attaaatcag cttcaacaga agatggatga gttgctcaaa cgtgataaca
     3421 atgtgtaccg ttccatattc gaatcgtcgc cgattcccga tagcgcacga ctgaaagaaa
     3481 tggagatgag caaagaagtt cagttggtaa acagtttgag cagcagcgaa ctgcttaaaa
     3541 gcattacagc acagctaaat gatctcacgc tgctcgttgc ttaccaacaa aaaagttttt
     3601 ccgatataga aaacatggta aaggataaag agaaactgtt agcagccatc cctgccattc
     3661 aacccgtgag cgataaggat ctcacccgca tagcatccgg atttgggatg cgaatagacc
     3721 ccgtgtacaa ggtgcctaag tttcatgcag ggcttgattt tactgctcca ataggaacgc
     3781 caatttatgc gacagcggat ggcattgtga cggaatcggg atttagtccc gatggatatg
     3841 gtaaccgcgt tgtgatcaac catggttacg gttacgaaag tttatatgga catatgtatc
     3901 gaacaaaagt taggaatggt cagaaaataa aacgcgggga agtgatcggg tatgtaggca
     3961 gcacaggaaa gagcaccggt ccgcattgtc attatgaagt gcataaaggc gggcaggcgg
     4021 tggacccggt ttactttttt tataacgatc tttctcctga acagtatgac cgtttgttga
     4081 agctggctca aacagcgaat caaagttttg attaatataa agccgtcggg tgcccgttac
     4141 ttaaatttga actgaataat cgctttcatg agcaaagaat tagatagacc cgtgagggtt
     4201 cttgttgcaa aagttggcct ggatggacac gaccgcggcg cgaaagttat tgcaaccgcg
     4261 ttacgcgatg caggtatgga agtaatttat acagggttaa gacaaactgc agaaatggtc
     4321 gtgaacaccg cgttgcagga agatgtggat gcgattggca tcagcatctt aagcggagcg
     4381 catatgaccg tttttccaaa gatcattcgc ctgatgaaag aaaaacaaat ggacgatgtg
     4441 ctgctcacag gcggaggcat catccccgaa gaagatatgg tgaagctgca tgaaatgggc
     4501 gttggaaaat tgtatgcacc cggaaccgac acccgcgaga tcgctggtga catccgaacc
     4561 tgggtaaaag caaacaggaa tttttaaatt tgcgtatggc tgagagaagg ataaaaattt
     4621 tcaaaagtct tgaagagcag gagatggatt tcctggaata cttctttgac ctgacacctt
     4681 ctgaacggtt agaagctctt gccaatctgc agaaaaaaaa ttatggccgg gagttcttgc
     4741 aaaaaccgca aaaaaaaata acactccgca agcacttcat ttatggatat tgaaaatgag
     4801 gaattccttc tttttctaaa atgcgctcag cagaataagt taagatatct gtgcataggc
     4861 ggttatgcag tgaactatta cggatttcat agaatgactg aagatctgga catttggatc
     4921 gcacccacaa atgagaacaa ggaaagcttt ttaagtacac tacgttgcat gcgctacgtc
     4981 gaagatgaaa tcaacctcat aaaaaatgaa gatttcacaa catattttgt atgcaggtta
     5041 ggaactagac ctcatgtaat agacgtatta acgatagtcc actctcagct aaatttcgac
     5101 gaagccgaga aaaatattgt cattcataaa gtggaaaaca atattgaact gcgaattgtc
     5161 ccatatgatg tcctaattga aacaaaatta aaatcaaacc gtcccaaaga ctattgggat
     5221 gttgcaaagc tggatgaact aagaaaccta aaaaataaaa aatgacctat caaacactgc
     5281 tcacgtcgtt agacgataat atttacataa tcaccgttaa ccgtcctgat aaattgaatg
     5341 cactaaacag aacggtaatt gaagaactaa gctctgcagt tgatgaggtg tacagtaacg
     5401 atcagatcaa atccgccgtg ataacaggcg caggagagaa ggcttttgta gcaggagcag
     5461 atatcagcga gtttttacaa ttgaatgccg atgaaggtga ggcgttggca aaacgcgggc
     5521 agcaaatggt gtttgacaaa attgaaaact cccgtaaacc aattgttgcg gctgtaaatg
     5581 gatttgcttt aggcggcggc tgtgaattgg cacttgcttg tcattttatt atcgctagtg
     5641 ataatgcaaa atttgggcag ccggaagtga acctcggttt aattcctggt tatggcggca
     5701 cacaacgttt aacacaattg atcggcagga acagggcaat gcaactgatc atgacgggcg
     5761 aaatgataaa agccgaagac gcagaaaaat atggcatcgt gaacaaggtc gtttcccaaa
     5821 aacaattgct tgaagaagtc aaaaccattc tacaggtcat tcatgcaaaa tcgccgcttg
     5881 ctatttcaaa aattattgaa acgatcaaca attttgacca cacgcagcag ggttatgatt
     5941 ttgagatgca aaaattcggt gaatgctttg gcacagaaga catgaaagag ggagttcatg
     6001 cctttcttga aaaacggaag cccctgttta aaggaaggta gcgttgcaga tctctccttc
     6061 gtcgagatga cagtcccgct gattcattcg acttctcatt ttgatcagcg ttgattttat
     6121 ttatacgcct tagctttcaa cacaaccgta tcatttggaa acaacggcac atcatacccg
     6181 ccggaatcca ggacggtttt aggaaacata cgctgcaact ggatccagtc tcgcttatca
     6241 actttcgttt cgtacaagta aatcgattgt agttgtttca gatctttcaa acttgcaagc
     6301 ccggcgtcag taatgttcgt gccgacaaga tttaatgatt gcaggtgttt caaggtctgc
     6361 agtttctgca atcctttatc cgtgatgttt gtactgtcca gttgtaataa cgtgaggttt
     6421 tcgcattgag ctacgtatgt catggcacta tccgaaatat ttgtgtcgcc gagtttcagc
     6481 cacaccaatt gtttttttaa cgggagcagc aacgacaagt ctttatcgga aatgtttgac
     6541 gcggttacaa aattcgccat gaggtagttg ctgttttgcg caaccggcaa cacgatgacg
     6601 cctttttctt ttaattcttc taacgctttg tcatccgctt tttccaccgc gacttgagga
     6661 acagtagccg gcagtttgtg ttcgatatga tctgcctgca aagccaataa atacttgtca
     6721 atcggtggcg gttgcggcat gtcttttact ttgctcgttg tgtcagcgcc gttttcgatc
     6781 caccaatgca gcaatgtaat ttgccggtca tttggctgag gcttttctct cggtggcatg
     6841 tgatcttcat tttctgtcgg caacaataat cgccggatta tatcactggt atccgggttg
     6901 cccggcacaa ttatttttcc atccttgcct cctttcatga tcaattcata tttgtcaagc
     6961 cgcaatccgc ccttttgttt tttcgagcta tggcatccgt aacatttcgt ttgaagtatt
     7021 ggttgaatga tatctgcata cgcccgtgcc tgctgcacat ttgcgatcgg cctgatcttg
     7081 atcgtgtcaa aattctccga attaaaattc aaagaaatat aatcggtacc gtgagttaat
     7141 gagccgccta aatgaccggt aacaaaaatc agtagcaata agccgaccgc gaggcctttg
     7201 taaatggagt cgaattcctg tcgcgcgagt ttcatatata gaaacatcga tacgatcgca
     7261 acagcgattc ccatccacat atgccatact acaagaggtt tctcatattc atcggttgtg
     7321 gatagaatat atcctgttac acaggaaagc aaagctgcga ccacacctat gagtaaaatg
     7381 atcttaagta cctgttggga tatatgataa cgttcattct ttcttagcca cagcaatagc
     7441 aaagccatta gtaaaattcc tattggaaga tgaacaagag caacatgaaa atgaccgatg
     7501 aattcagaca tgagaaagct gttagctgtc agctgcgagc tgcgagccta cgaacaaagt
     7561 ctattagcaa aagcgacaag catcttttgc tcttcgtcaa ttttgtttaa tgtgttacta
     7621 agtaaatgct tgtccccaaa gtccaccgct tgcgcaatga gtaattgtgt ttccagctca
     7681 aacgaagaac ctaacgaaat ctcgatgaac ctgtaataat ctttttcgct tcttctactg
     7741 ctgccttctg caatgtttga tggaattgaa atggctgctt tggtcgcttg ctgaccaagg
     7801 caaaactttt ctgactttgg aaaaccgtca atcaatttgt aagtatcgac cgcaatctca
     7861 aaacctttct gccagatttg aagtttttta aaatttctca tatttgtagg tttagttttc
     7921 gcttttccag ctcgccgctc gaagctcaca gctcgtagct gactttatcc ataccgtttc
     7981 ctcaataggt ccttcatatg cacattgatc gcccactggt ctgcaagcgg ctcctgcgtg
     8041 tagggcaatg taggcatgta tgtcggcgga ccaaattcgg tgagtattgt taggcggtct
     8101 ccctgctgtt tttttatctc gacgatcttg tcccaccagg caaagtgtgc tttcatcgca
     8161 tcatcccatt caggcgcacg cgggtcattt acctgcgggc cttccgggtg accgatgcgt
     8221 gcatggacat gatcgactcg ttgtaacgcc aggtcgactg tttcctgctg atcctccaac
     8281 aggctttcac ttacattgca ccaatgtgaa acatcaaatg tgatgcgcaa gccggggata
     8341 gtgtcaatgt aatgtcttgc caccggcgcc gcgaataaaa tgcgcgaacg gtgtgtctca
     8401 tgacagatct taagtccggt gtctttcgca agctgcatcg tatgatcgat aaaagttttg
     8461 ttctgatcat atgaaaaata atctcttccg gaatgacaat ttatgtaaag cggtttttga
     8521 acagtattca tcgccgcagc atcaaccata ttcttaaacg tgttcaaatg atcctcgtat
     8581 ctactttcat gaccggccgt caaaaaacct acttcaagat catttgcttt taatgcagcg
     8641 aacaacgcat cctgctcttt cttttcggtg ggccaccata tttcaattcc gtcataacct
     8701 tcctgtttta ctttggcgca atactggtcg atcgttccgc caaaccccca attcgtggca
     8761 agcactttta attcaaaatt tttattcacg gtgaaatttg gtttgtatga tgaagaaaat
     8821 gcatcaagcg aaaccatgaa tgcagccgca gatgatgcac tgagttctat aaaatttctt
     8881 cgtttcaaat tcgtacttta aaatagagat gaaatgtaaa tcaattccag tcaaaattta
     8941 caacctggcc atccagtttc cattttgcag gctgcgggtt agttatccag tccaacggct
     9001 cgccaaccgg ttgagatttt gaagcatctg caaaacattg tttgataaat gccttttgtt
     9061 cttcaccaac agcatctggc tgcgcagaaa taaatagcgg tgcactgctc tgtgccagta
     9121 attgcatcca ctgtttgttc ttctcccagg aaaccgcggt tgtcaggccg acacaatcgc
     9181 catccactgc ataaaaagtt ttatgctgaa ccattctgaa gccaagcgta ttcacaccca
     9241 ttttttttgt gcgctcccat tctttaccac tagtgtcatc gccaatacga tttaactcaa
     9301 acatgcccgc agataaatga ctgatggtat tgcatcctat caaatacata ccgcccgccg
     9361 catcccgaat tgacttatac aggtacaaaa tgatttctgc atttgtcctt gaa
//
LOCUS       DASQJI010000042         3378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2152953,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000042 DASQJI010000000
VERSION     DASQJI010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2152953"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(611..>3378)
                     /locus_tag="VEV83_01360"
     CDS             complement(611..>3378)
                     /locus_tag="VEV83_01360"
                     /inference="COORDINATES: protein motif:HMM:NF026255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK43785.1"
                     /translation="SFAQKTIVEGRVYDSVMHSALAYTTVSLVRASDSALVTFARADS
                     SGKFILNAIEKGSYLLSASYVGHVTVWQQVDVSGMSIQNIGNVYMQDLKSAHDVTVNA
                     KRAPVVMNNDTLEFNAENFKTQPNAVVEDMLKKMPGVTVEKDGTIKVNGQTVRRVLVN
                     GREFFTGDVKMATQNLPADAVDKVQVFDRQSDQSQFTGVDEGNKEKTINLKLKKDKDN
                     ALFGKLMAGAGTDERYDAQANVNKFKGKEQLSLLGMSNNTNRQGFQLMDVLNFTGQVG
                     RDMRNGGNVQIRVDNNDGNNNGLPITGLGQTQPGIATTTAGGINYNNVWNKEKTDWSS
                     NYMGSNIHLVTSSQTNTENIIPDNTFNSAELSNTIYDNTQHRFNVILDQKVDSSFSFR
                     ITPSVTWQTTNKKDESRYMSEAASGVKLNDGFSNTTSNADAFNFNSEFLFRKRFAKKG
                     RTISLDVSTLYNHSSSEGTLVTNNTFYNPDGSTDDSALNQINYRDAITRNFASTLIYT
                     EPVGKRSLLELKGYVSTNVGNSNKETYDFDNLSGKHDAYNNTLSNDYQSNYTYTGGGI
                     NFRTNQKKVNITAGTQLQHAQLESINNSVQHTVAQNFTDLLPTAVVQYNISRMKNLRF
                     EYSTFTTQPTVLQLQPVADVSDPLNIIVGNAYLKRQYTNNLQLNLFAANPVARKNLFG
                     FFNFSSVANAITRSDTIKQNGARVSSYTNLNGTYSMFGNLEYGFPLKKLKSRLEVGTS
                     ARYNKNASIVNAERNDIHALTVGPNVDYHFGIDNKIDVDLTARVTLNNTKYSLQSYAD
                     NHYFQQNYGIDMTNYLPWHISLHNDFSYIINTGRADGFNENIPLWNASVAKSFLKNSR
                     GEFKFSVQDLLNKNTGITRSSNQGYIVDEKFNVLQQYFLLSFTYSLNKSGLNQGGPRA
                     VIRTFNN"
BASE COUNT          812 a          764 c          757 g         1045 t
ORIGIN      
        1 gcgcgaacga agttcattct cccacaaagc gcgcgaaggc cacaaaggag cattaaaaat
       61 ctctcttcgt gaattccgtg ggctttgtgg gatccatatg agttcgggtc gcaccttaat
      121 atgaaaacgg cgctaaagaa agttctttct cccataaagc acgcgaagtc cgcaaaggaa
      181 acatcgaaat ctctctttgt gcgctcagtg ggctttgtgg gatttatata agttgcggcc
      241 gcacgttaaa atgaaactgc gcgaacgaag ttcttctcgc ataaagcacg cgaagtccgc
      301 aaaggaatca ttaaaaatcc cttcgtgaac tccgtgggct ttgtgggatc tatatgagtt
      361 gggacgcacg ttaaaatgaa aactgcgaaa acgaagttca ttctccacaa agcacgcgaa
      421 gggcgaaaag aaaacattga aatctctctt tgtgcactcg gtgggctttg tgggatcgat
      481 atgagttggg acgcacgtta aaatgaaaac tgcgcgaacg aagttctttc tccgcacaaa
      541 gcacgcgaag gccacaaaaa aaccatgaaa tcttttttcg gtgacgtcat cgacctcgtg
      601 ggatccatgc tcaattatta aacgtcctta tcacagctcg tgggccgccc tggttcaatc
      661 ctgatttgtt taaactgtaa gtgaagctga gcaggaaata ttgctgaagc acattgaatt
      721 tctcgtctac gatataaccc tggttactgc tgcgcgtaat gccggtgttt ttgttaagca
      781 ggtcttgcac gctgaacttg aattcgccac ggctattttt taaaaagctt tttgctacag
      841 acgcattcca taaaggaatg ttttcgttga atccatcggc tctgccggtg ttgatgatgt
      901 aactaaaatc attgtgcaga gaaatgtgcc acggcaaata attcgtcatg tcaattccgt
      961 agttctgttg aaagtaatgg ttgtccgcgt atgattgtag agagtacttt gtattgttca
     1021 gtgttacgcg ggcagtcaga tcaacatcga tcttattgtc gatgccgaag tggtaatcta
     1081 cattcggccc gacggtgagc gcatggatgt cgttcctttc tgcgtttacg atggatgcat
     1141 ttttattgta cctcgcactt gtcccaactt caagccttga tttcagtttc tttagcggaa
     1201 acccgtattc aagatttccg aacatgctgt aggttccgtt gagatttgtg tagctgctca
     1261 cgcgcgcacc attttgctta atggtgtccg atcgcgtgat cgcatttgct acagacgaaa
     1321 aattaaaaaa accaaacagg ttcttcctgg ccaccggatt tgcggcaaac aaattgagct
     1381 gaaggttgtt tgtatattgt cttttcaaat acgcgttgcc aacaattatg ttcaacgggt
     1441 cactcacgtc agcaaccggc tgtaattgca aaacggtggg ctgcgtggtg aaagtgctgt
     1501 attcgaatct caggttcttc atgcggctga tgttgtattg aacgacagca gtgggtaaaa
     1561 ggtcagtgaa attttgagcg acagtatgct gaacggaatt gtttatgctt tctaattgcg
     1621 catgctgcag ttgagtgccg gccgtaatat ttaccttctt ttgatttgtc ctgaagttga
     1681 taccgccacc tgtgtaagta taattgcttt gatagtcatt gctcaatgtg ttgttgtatg
     1741 catcgtgctt acctgacaga ttatcgaagt cataagtttc tttattgctg ttccccacgt
     1801 ttgtgctcac gtagcctttt aattcaagca aggacctttt accaacaggt tctgtgtaga
     1861 tgagtgtgga agcgaaattt cttgtgatcg cgtcacgata atttatttga ttaagcgccg
     1921 aatcatcggt actaccgtcc gggttgtaaa atgtattatt tgttaccaat gttccttccg
     1981 aactgctgtg attatacagc gtcgacacat cgagtgaaat tgttctgcct ttctttgcaa
     2041 atctttttcg gaacaaaaat tcgctgttga aattaaacgc atcggcatta gatgtcgtat
     2101 tgctgaagcc gtcgttcaat ttaacgccgc tcgcggcttc actcatgtac cgcgattcat
     2161 cttttttatt tgttgtttgc catgtaaccg aaggcgttat cctgaacgaa aacgaactat
     2221 cgaccttctg gtcgagtatt acgttgaacc ggtgctgcgt gttgtcgtaa atggtgttgc
     2281 tcagttctgc gctgttgaac gtgttgtcag gaatgatatt ttctgtgttt gtttggctgc
     2341 tggttacaag atggatattg ctgcccatat aattcgagct ccagtctgtc ttttccttat
     2401 tccaaacatt attgtaattg atgccgcctg cggttgtggt tgcaatcccc ggctgcgttt
     2461 ggccgagacc ggttatcggc aagccgttgt tgtttccgtc attgttgtcc actcttattt
     2521 gaacattgcc tccgttgcgc atgtctctgc cgacctggcc tgtaaaattc aatacatcca
     2581 tcagttgaaa tccctggcgg ttcgtgttat tgctcatccc gagtagggaa agttgttctt
     2641 tccctttaaa tttattcacg tttgcctgcg catcataacg ctcatccgta ccggcgccag
     2701 ccataagttt tccaaacaat gcattgtctt tatctttttt cagcttcagg ttgatcgtct
     2761 tttctttgtt tccctcatcc acgccggtaa attgcgattg gtcgctctgc cggtcaaaca
     2821 cctgtacttt atcaactgcg tctgccggta aattttgcgt tgccattttc acatcacccg
     2881 taaaaaattc cctgccgtta acaagcacgc gccgcacagt ttggccattc acttttatcg
     2941 tcccgtcttt ctccacggta acgcccggca tttttttgag catgtcttcc acaaccgcgt
     3001 tcggctgtgt tttgaagttc tctgcattaa attcaagcgt atcgttgttc attacaaccg
     3061 gcgcacgttt ggcatttacc gtaacatcat gcgccgactt taagtcctgc atataaacat
     3121 taccaatatt ttggattgac atgccgctca catcaacttg ttgccagact gtaacgtggc
     3181 ccacatatga tgcagagagc aggtagctgc ctttttcgat cgcgttcagg ataaacttgc
     3241 ctgatgagtc ggcccttgca aaggttacaa gcgcagaatc gctcgcgcgc acaaggctaa
     3301 cagtcgtgta agcaagcgcg gaatgcatga ccgaatcata tactcttcct tcaacgattg
     3361 tcttttgcgc aaacgaaa
//
LOCUS       DASQJI010000043        11225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1231660,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000043 DASQJI010000000
VERSION     DASQJI010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11225
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231660"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VEV83_01365"
     CDS             <1..632
                     /locus_tag="VEV83_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43786.1"
                     /translation="QPALRISAKIVSYVLHPLFIPSYVFAWLSWRFPQTFAGISTAGM
                     TFKKISVFLNASFFPAFAVFLLWRLKFVDSIYLRTQKDRIIPYIITMIFYWWMWYLSR
                     DPKFDDQPDVLKFFYFGIFLTTVFGLIINNFIKISMHAMGAGTVFAFVILTCLFYRTF
                     LGTDILLVSFLAGLVCTARLLLSEHSSAEIYTGFVVGILCQLLGVWIAM"
     gene            complement(672..1085)
                     /locus_tag="VEV83_01370"
     CDS             complement(672..1085)
                     /locus_tag="VEV83_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK43787.1"
                     /translation="MISKMSHVSVYVLNQDSAYDFYVNKLGLKVHTDAPMGPGMRWLT
                     VTPPEQPELEITLMPVTEGMVFTKESAAAMKELVSKGTFGFGVFECDDIYATYEELKA
                     KGVEFTKPPKKEFYGIEALFKDDSGNWFSLGQKQK"
     gene            complement(1143..1577)
                     /locus_tag="VEV83_01375"
     CDS             complement(1143..1577)
                     /locus_tag="VEV83_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK43788.1"
                     /translation="MISESYPKVYLYRRVVQAKLFIDNNYAEKIDLNNIADEAFFSKF
                     HFIRLFKKIYRKTPHQYLKTVRIEKAMELLRANVAVSETCYEVGFESLGSFSALFKRI
                     AGMSPSAYLLRQQQIKAHILKTPLDFIPNCFAEKKGWKEKQF"
     gene            complement(1838..2398)
                     /locus_tag="VEV83_01380"
     CDS             complement(1838..2398)
                     /locus_tag="VEV83_01380"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYK43789.1"
                     /translation="MLTVNFTPFPTLYTDRLTLRRFTKNDASDLFRLRSNENLMQFID
                     RPRARSMKDALDLIEKINDSLIANEAITWAITLKSYSTVVGTIGFWRILKEHYRAEIG
                     YLLDPQLQGKGFMQEAMQVVLDHGFRVMRLHSVEANVNPSNSDSIKLLERNHFVKEAH
                     FKENYYYNGRFLDSVIYSRVVSGNDK"
     gene            2813..3190
                     /locus_tag="VEV83_01385"
     CDS             2813..3190
                     /locus_tag="VEV83_01385"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK43790.1"
                     /translation="MVAILAIAGNELLYLMQQLIHRQRPAEPLIENVAGYSFPSGHAF
                     AAYTFFGLLTFLLARSKRLKTRKIILSIIFFVAATIIAATRIYLHVHYATDMLGGFCL
                     SIMWLTFSVWVLNKLDDKSYQTR"
     gene            complement(3249..4031)
                     /locus_tag="VEV83_01390"
     CDS             complement(3249..4031)
                     /locus_tag="VEV83_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK43791.1"
                     /translation="MKQMRIVLFFLAVISVSFSPGEDTKSKKGKWVSLFNGKDLNNWI
                     PKIAGYKAGDNFGNTFRVHDGILSTRYDAYDSFRNRFGALFYDKKFSNYKLRVEYRFT
                     GDTVPGAPSWGFRDGGIQYHCQSPSSMNVDQPFPVCLEYNLLGGNGKQQRPSGEICAN
                     GIYVEINGKRNASYCSPPIVKRTLSGDDWVMAEIDVQGGKIKHFINGEEVLEFDNPKY
                     DSTNALAKKFITGRNDKVSEGYISLQSNSHPMDFRRIEIMEY"
     gene            4119..4787
                     /locus_tag="VEV83_01395"
     CDS             4119..4787
                     /locus_tag="VEV83_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYK43792.1"
                     /translation="MFIGHYAIAFAAKKNAPAISLGWLFIAVQFLDLLWPTFLLLNIE
                     HVNINYDPSEITPLAFTYYPFSHSLLMAAIWAILFGIGCYMLTKKRAYSFVLFLCVIS
                     HWFLDLLVHYPDLPLYPGNAPKVGLGLWGMPFLENVIEFLMLAAGVILYLGATREKNK
                     TGKYLTWVLVLLLVTAHLANILGPTPTNTKIVAWGAQLMWLFVIIAFWADKNRIPMVD
                     TAAA"
     gene            complement(5024..5857)
                     /locus_tag="VEV83_01400"
     CDS             complement(5024..5857)
                     /locus_tag="VEV83_01400"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK43793.1"
                     /translation="MQIIIRGVRGSIPTTAPDASHYGGNTSCVVVLEENWMLVMDGGS
                     GMQRFNLTDGTNIKRIDILLTHLHLDHIQGLGFFSPLFDPSFEIHIWGPASNTSSLRA
                     RLSRYLSPPLFPVLLRDLPCSLTLHEIENSKFGIGPFLVESRYIIHPGPTVGFRIETQ
                     RSVFSFIPDHEPALGPFNSQTDKQWISGIDLALNADVLLHDAQYSALEYQSKIGWGHS
                     SMDDALKFAAAAEVKRLLLSHHDPAHSDKKLNKLFDNLKEQNNYSFNYELAAEGTHIE
                     L"
     gene            complement(5881..6273)
                     /locus_tag="VEV83_01405"
     CDS             complement(5881..6273)
                     /locus_tag="VEV83_01405"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HYK43794.1"
                     /translation="MAYDIEIILNRQLADCLSMPVFITDTMGNLIFYNEPAEKVLGTR
                     FEEAGEMKADEWSTIFKQQDDDGNLLGADELPLMRTLRDHYPYHKTFCIVSLKGETEK
                     ISVTSYPIIGRTGKFLGAVAIFWKAKEL"
     gene            complement(6423..9197)
                     /locus_tag="VEV83_01410"
     CDS             complement(6423..9197)
                     /locus_tag="VEV83_01410"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HYK43795.1"
                     /translation="MRKILYVVLLAFTTATLFAQTVKQVQLTKFDMQSSAAISDDGTV
                     LSTTNYRSNNYWFPVKVPCTVLTGLVANKVYPDPYIGMNNMLIPDASDSFNHEYHLEK
                     YSYLPGEPNPWKKPYWYRTTFSVPATDKGKFFQLIFKGINYRAEVWLNGNRIADSSQM
                     AGMFAEYFLNATSAINAGGVNVLAVKIYPLDEPGLPAHPQLNALGDFYANGGPTGDIG
                     KNVTMLCSAGWDWIPEVHDRNIGIWQPVYLRTTGQVIIQQPHIITDLPNLPDTSIAKL
                     TLRFTLSNHANATSNGKLKLIISPETFEGKAFIIEQNVSVAANDKKDIELNADNVKQF
                     VLNKPHLWWPNNYGNPDLYRMRIQYINGNDISDDTSFLFGIRTVSSKATTVNGWIRRD
                     FYVNGKRVHLVGGAWVPDMMLNRDSIRNDYELHLCRNANVNLVRIWGGGIGETDDFYD
                     CADRYGMMVWQDFWITGDTHGEFKGSADYPPQGDVYVRNIVSTILRIRNHASLLVWTG
                     GNEGHARKELYDAMRDNVATLDGTRPFIPSSSGFAKQPSGWKGSWPDDMPSGVYSGGP
                     YSWQDAAQYYKLADAGKDWVFKDETGLPSQPPYSTLPKIISNLVPDPSLPYPLNDTWG
                     YHDACSGNGHYELYYKAMKDRYGEPTSMKNFCDKMQLVNADGYRGIFEAAGHKLNETG
                     GVMLWKLNAAFPSVVWQVYDWYLQPNAGYYFMQNACEPVHVQLNLDDSMVAVINRTYH
                     PQPNLSVHVQVVDINGTSLYNETKNVNLDTTAVKEISSLSSALEKAEGIVFVVLHLKD
                     AHGETISRNTYWMQPHHDYRMLSQMKPAQLSVKVLHSTKEKNNYQYTIELTNTSGALA
                     FFINPQLMIDDEEIAPSFWSNNYFSLTANESITINLSCPVEKLNHKQPKLVTSGWNVA
                     AQSIDLNGNQ"
     gene            9284..9625
                     /locus_tag="VEV83_01415"
     CDS             9284..9625
                     /locus_tag="VEV83_01415"
                     /inference="COORDINATES: protein motif:HMM:NF025442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4258 domain-containing protein"
                     /protein_id="HYK43796.1"
                     /translation="MFKLLIILLAFVDCNNAAKDFDRDPQAIHYSKHARCRMECRHVD
                     ESEVKEMIEKGDINFSKSELNNDACYKRYALEGMSHDSQRLRIIVAECNDELTVITVI
                     DLGKDWPCDCE"
     gene            9751..>11225
                     /locus_tag="VEV83_01420"
     CDS             9751..>11225
                     /locus_tag="VEV83_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK43797.1"
                     /translation="MKSLWNEAAAEQLKGDLLKLRVYTSQLLGAEPDLVLHGGGNTSV
                     KISESNLFGENEELLYVKGSGWDLATIREEGFAPVRMSVLLKMAQLDRLSDADMVKHQ
                     RAAMTNPNAPAPSVEAILHAIIPFRFVDHTHADSVVTITNTPGGKKRIEEIYGNDVLI
                     VPYVMPGFILSKEIYKLTQGLDWKTIKGIILLNHGIFTFHDEAKESYEQMITLVSKAE
                     RYLRNKKATIVVAKKKQKPNLMKLARLRKAVSSRMGNGCIALLQDSLSSIGFSNLENV
                     SSITARGPMTPDHIIRTKRTAMILGDEPEKSVERFSQDYEKYFNKHTNRNLTQLDAAP
                     RWAVWPGHGVVTFGKSLEEAKIVADISEHTIKAIQQAEKLGGWQSLPQKDLFEMEYWE
                     LEQAKLKKSASTKNFQGKIALVTGAASGIGKACAIALAKEGAVVVALDINAAIQKMQT
                     PGVFGITCDVRNKTALNNAVENTIKQFGGLDLLISNAGIFSS"
BASE COUNT         2994 a         2466 c         2507 g         3258 t
ORIGIN      
        1 cacaaccggc gttacgaatc tcggcgaaaa ttgtttccta tgtactgcat ccacttttca
       61 ttccgagcta tgtttttgca tggctaagtt ggcgttttcc tcaaacattt gcgggtatca
      121 gtaccgctgg tatgacgttc aaaaagatca gcgtatttct taacgcatcg ttctttcctg
      181 cgtttgcagt ctttcttttg tggcgactaa agtttgtcga cagcatttac ctgcgtacac
      241 aaaaagaccg cattatacca tacatcatca cgatgatttt ttattggtgg atgtggtacc
      301 tgagccgcga tccaaaattt gacgaccaac cggatgtgct caaattcttt tatttcggca
      361 tctttctcac gacggtcttt gggcttatca tcaacaattt catcaagatc agcatgcatg
      421 caatgggagc aggtaccgtt tttgcattcg tgatactgac ctgcttattt tatcgaacat
      481 ttctaggcac cgatattctt ctcgtctcat tcctggccgg gctcgtctgc acggccaggc
      541 tgctgttgag cgagcattca agcgcagaga tctatacagg gttcgttgtt ggtatcctct
      601 gccagttatt gggcgtgtgg atagcgatgt gaggtgtcag acactttgga agtgtcagac
      661 acctcttact ttcacttttg tttttgtcct aacgaaaacc agttcccgga gtcatcttta
      721 aatagcgctt caattccgta aaattccttc ttcggtggct ttgtaaattc aacacctttt
      781 gccttcagtt cttcgtaagt tgcatagatg tcgtcacact caaacacgcc gaatccaaac
      841 gttcctttgc tcacaagttc tttcatggcg gcagcagact cttttgtgaa caccatccct
      901 tcagtcaccg gcatcagcgt gatctccagt tctggctgct ctggcggggt gacagtcagc
      961 cagcgcatgc caggtcccat cggcgcgtcg gtgtgaactt taagtccaag tttatttacg
     1021 tagaaatcat aggcgctgtc ctggttgaga acatacacgc tcacgtgcga catttttgag
     1081 atcattgttt acttttttga ttaaggatac aaaagtgaag gccttttcaa tgatcggttt
     1141 cttcaaaatt gcttttcttt ccaacctttt ttttctgcaa aacaatttgg aataaaatcc
     1201 agcggtgttt tcaaaatatg cgcttttatt tgttgctggc gcaaaaggta tgcggacggg
     1261 gacattccgg cgatgcgttt aaaaagcgca ctaaatgagc cgaggctttc aaagccaact
     1321 tcgtaacagg tttccgacac agcaacattt gcgcgcaaaa gttccattgc tttttctata
     1381 cgcactgttt tgaggtattg atgcggtgtt tttctgtaaa tttttttgaa cagcctgatg
     1441 aaatgaaact ttgagaagaa ggcttcgtcg gcaatgttgt tcaggtcgat cttttcagcg
     1501 tagttattat cgataaaaag ctttgcctgc acgactcgtc ggtataagta aacttttgga
     1561 taagattcgc ttatcatggc ttgcggcaaa tttagcaatc gggatcagag acatcaaaaa
     1621 cgcaaaatta attactgaag atcgcctttg caacaaattt ccctcacggc aaattgcaat
     1681 ttgtatcaat ttctcaaaac gtgaaatctt ttatgatcgg ctttcaatac tcaatcaaac
     1741 tccaaaacgt tgtagcatgc gaacatcgcg gcattaatgt tttgaggacg gtcaaattgt
     1801 aaattgtaaa tcctagattg taaatctaaa tcggacctca cttatcgttg ccggaaacta
     1861 cccgcgaata gatcactgaa tcgagaaacc tgccattgta ataatagttc tctttaaaat
     1921 gcgcttcctt cacgaaatga tttctttcaa gcaactttat cgaatcactg ttgctcgggt
     1981 tcacattggc ttctactgaa tgcagcctca taactctgaa cccatgatca aggacaacct
     2041 gcattgcctc ttgcatgaat ccctttccct gcaattgcgg gtcgagtaaa tagccgattt
     2101 ctgcgcgata atgttctttc agaatacgcc aaaaaccaat tgttccaaca acggttgaat
     2161 aactttttag cgtgatcgcc caggttatgg cttcattggc gatcagcgaa tcgtttatct
     2221 tttcaatcag gtcgagcgca tctttcatcg atctcgcacg gggccggtca ataaactgca
     2281 taaggttctc atttgatcgc agcctgaaca gatcgctcgc atcgttcttt gtaaatcgac
     2341 gcaaagttaa cctgtcagta tataaggtgg ggaacggcgt gaaatttacc gtaagcataa
     2401 gttggtatta ttaaagggaa aatctaattt tcataatgga tccggaaaac tgttttgcat
     2461 gagtcaagct atatagagat tgtgtaaaat gcaagttttc taaaaatttt tttctatcga
     2521 acccccggtc aaaagaaagc gagcaaattc gaccgctacg gttgtcttat ctataatttc
     2581 gttcgtcctg gcgcttgccg ctttttattt tttagcaatt accgtcacag gccatgaaga
     2641 aacgagcctg gacagttcag cattcgaatt tttctcgcat gttagttctc ccttggttac
     2701 acggctaatg gtcttgatca cattcctcgg gtcgagatac tttatgtttc ccgcatacac
     2761 ggcccttgtt atatactgct tgttgttccg ccgaaagata aaactgggta ttgtggtcgc
     2821 aatacttgcc atcgcaggga acgagttgct ctatttgatg cagcagttaa ttcaccggca
     2881 aaggccagct gagccgctga tagaaaacgt ggccggttac agctttccga gcgggcatgc
     2941 atttgcagca tacacatttt ttggcctgct aacgtttctg ctggctcgaa gcaaacgtct
     3001 aaagacgcgg aaaataattt tgtctattat cttttttgtg gcggccacaa ttatcgcagc
     3061 tacaaggatc tacctgcatg tacattatgc caccgatatg ttaggaggct tttgtctaag
     3121 catcatgtgg ctgacttttt cggtttgggt actcaacaaa ttagatgata aaagttatca
     3181 gacccggtga actcgctaaa tagtttgctt acccgccgct gcaataacag actatattca
     3241 gcgcatcact aatattccat gatctcaatc cttctgaaat ccatcgggtg actattcgat
     3301 tgcagggata tatatccttc gctcacttta tcgtttctgc cagtaataaa ttttttggca
     3361 agggcatttg ttgaatcata ttttggattg tcgaattcaa gcacttcttc tccattaatg
     3421 aaatgcttta tttttcctcc ctgcacatca atttctgcca tgacccaatc atctccgctt
     3481 aaagttcttt ttacgattgg cggtgagcaa tagctggcgt ttctttttcc gttgatctca
     3541 acataaatgc cgttcgcaca gatctcccct gaaggccgtt gctgcttacc atttccgccg
     3601 agaagattat attcaaggca cacgggaaaa ggctgatcta cattcatgga ggaaggtgac
     3661 tggcaatgat actgtatccc tccatccctg aatccccacg atggtgcgcc gggcacagtg
     3721 tcaccagtaa agcggtattc aaccctcagc ttgtagtttg agaatttctt atcataaaat
     3781 aacgcgccaa acctgtttcg aaagctatca tacgcatcat acctcgtact aagaattcca
     3841 tcatgcacgc gaaatgtgtt tccaaaattg tcgcctgcct tgtatcctgc aattttcggg
     3901 atccagttat tgaggtcctt cccattgaac aggctaaccc attttccttt tttggacttc
     3961 gtgtcttctc ctggtgaaaa tgatacagaa ataaccgcaa gaaaaaataa aactatccgc
     4021 atctgtttca tgaagggcaa tttggtggga agttaaaaaa ctttttactc gcgaaatcgg
     4081 cgcttcctat atttgttgtg ttcgccaaac aaatcaacgt gttcataggt cattatgcga
     4141 tcgcgttcgc agctaaaaag aatgcgccag ccatttctct tggatggtta tttattgcgg
     4201 ttcaattttt ggacttactg tggccgacat ttttattgct gaatatcgaa catgtaaata
     4261 ttaactatga tccttctgag ataacaccgc tagcgttcac ttattacccg ttctcccata
     4321 gcttgttgat ggcagcgatt tgggcaatcc tgtttggaat aggttgttac atgttgacga
     4381 agaaacgtgc atacagtttt gttttatttc tctgcgtgat cagccactgg tttcttgatc
     4441 tgctggtgca ctatcccgac cttccattat acccgggtaa cgctccgaaa gtcggacttg
     4501 gcttgtgggg catgcccttc cttgaaaatg taattgagtt cctgatgctc gcggctggcg
     4561 tcattcttta cttgggggcg acaagggaga agaataagac aggcaaatat ttaacatggg
     4621 tgcttgtttt gctgcttgtg acagctcatc tcgcgaatat tctcggtcct acgcctacta
     4681 atacaaaaat agttgcatgg ggcgctcaac tcatgtggct tttcgttatc atcgcttttt
     4741 gggcggataa gaatcgaatt ccaatggtcg acactgcagc agcctgatct ttttctcgtt
     4801 gcgcgtttac ctcttgtcgc tcaagtgaaa aaaattgacg cactggcaaa tgctgtctca
     4861 tcagttatac gtgctttccg tggattttta taaatgtatt gcggcgaacc tgctgcatgc
     4921 gggaaggaat cgataactaa gacctgctta ccaaaaagat tgaaggcgac aaatccgtag
     4981 acatattaaa agctgaaatg atattttcaa cgcacacatt taattaaagc tcgatgtgcg
     5041 taccttctgc tgcgagttcg taattaaaag aataattgtt ctgttccttt agattgtcaa
     5101 acaatttgtt gagttttttg tctgaatggg caggatcgtg atgcgataaa agaagacgct
     5161 tcacttcggc agcggctgca aattttagtg cgtcgtccat gctgctgtgg ccccatccga
     5221 ttttgctctg gtattcgagc gcgctgtatt gtgcatcgtg caacagcaca tccgcattca
     5281 acgccaggtc aatgcctgat atccattgct tgtccgtctg tgagttgaaa gggccgagag
     5341 cgggttcatg atcagggata aaactgaata cggagcgttg cgtttcgatc cggaagccaa
     5401 ccgtgggtcc gggatgaata atataccggg attctacaag aaacggtccg atcccaaact
     5461 tactgttttc gatttcgtgc agcgttaatg agcaggggag atcacgcagc agcaccggga
     5521 aaagcggtgg agaaagatac cggctaaggc gtgcacgcaa actgcttgtg ttggaggctg
     5581 gcccccaaat gtgtatctcg aaagagggat cgaaaagcgg gctgaagaat ccgaggccct
     5641 ggatgtggtc caggtgcaaa tgcgttagca ggatatctat tcgcttaatg tttgtaccgt
     5701 cagtaaggtt gaatctttgc attccggaac caccatccat tacaagcatc cagttttctt
     5761 ccaatactac cacgcacgag gtgttgccgc cgtagtgaga cgcatcaggc gcggtagtgg
     5821 gaattgagcc gcgaacccct cggatgatga tttgcatttt ttatttttga gatcgaattg
     5881 ttataattct ttcgccttcc agaagatcgc aacagctccc aggaattttc cggttcttcc
     5941 aataatagga tatgatgtga ctgagatctt ttcggtttct cctttcaggc ttacgatgca
     6001 aaaagtcttg tggtatgggt agtggtccct cagtgtgcgc atcaggggta actcatcagc
     6061 gcccagcaaa tttccgtcgt cgtcctgctg tttaaaaatt gtcgaccatt catctgcctt
     6121 catttcaccg gcttcttcaa aacgggttcc caaaactttt tcggctggct cattataaaa
     6181 aatcaggttc cccatcgtgt ccgttataaa aaccggcatc gacagacaat cggccaactg
     6241 gcgatttaag atgatttcta tgtcgtaggc catacacgaa attttcgcgg gagcaatggt
     6301 ttctaaaagt aaagcgaaat ggatgaaaaa gagaaatttt tttatatacg caaatgaacg
     6361 tttgttgaaa tgcctcgacg cttggccata caattagtgc cgatacgggt gcgggaacaa
     6421 cctcattgat tcccgttcaa atctatcgac tgtgcagcaa cgttccatcc cgatgttacc
     6481 agtttcggtt gtttgtggtt tagtttttca accgggcaac tcagattgat cgttatgctt
     6541 tcgttggcag taagggaaaa ataattattc gaccaaaagg aaggggcgat ctcttcatca
     6601 tctatcatta actgcggatt gatgaagaac gcaagcgcac ctgatgtgtt cgtaagctcg
     6661 atcgtgtatt gatagttatt tttttctttc gtcgagtgaa gaactttcac agacaattga
     6721 gcaggcttca tttgcgacag cattctgtaa tcatgatggg gttgcatcca atatgtattt
     6781 cgtgagatcg tttcaccgtg cgcatctttc aaatgcaaaa cgacaaatac aatgccttcc
     6841 gctttttcca gtgccgatga gagcgatgat atttctttaa cggccgttgt atcgagattc
     6901 acgttttttg tttcgttgta aagagaggtt ccgttgatat cgaccacctg gacatgaact
     6961 gagagatttg gttgtgggtg atacgttcga tttatcacag ctaccatcga gtcatctaaa
     7021 ttcaattgaa cgtgaacagg ctcgcatgca ttttgcatga aataataacc ggcattcggt
     7081 tgaagatacc agtcgtacac ctgccaaaca acgctcggga aagctgcgtt caatttccac
     7141 aacatcacac cgcccgtctc gttgagcttg tggcccgccg cttcgaatat gccacggtaa
     7201 ccatcagcgt ttaccagttg cattttgtcg caaaaatttt tcatacttgt tggttcacca
     7261 tatcggtctt tcatcgcttt ataatataac tcgtaatgtc cattgccgga gcatgcatca
     7321 tggtatcccc atgtgtcatt caatggatat gggagcgaag gatcagggac aagattggaa
     7381 atgatctttg gaagtgttga ataaggcggt tgcgacggca accccgtttc atctttaaag
     7441 acccagtctt tacccgcatc tgcgagctta taatactgcg ccgcatcctg ccatgaatac
     7501 ggaccgccac tgtacacacc cgaaggcatg tcatcaggcc aggaaccttt ccagcccgat
     7561 ggttgttttg caaaacccga tgaacttgga ataaatggcc tcgtgccgtc aagcgttgca
     7621 acgttatccc gcattgcatc atacaattcc tttcgcgcat gaccttcatt gcctccggtc
     7681 cacaccaata aacttgcgtg gttgcggatc cgcaatatgg tgctgacaat attccggaca
     7741 tacacatcgc cttgcggagg ataatcggcc gagcctttga actcgccatg cgtgtcgccc
     7801 gttatccaaa agtcctgcca caccatcatg ccataacggt ctgcacaatc ataaaaatca
     7861 tctgtttcgc cgatgccgcc gccccaaatg cgtacaagat tcacattcgc atttctgcat
     7921 aaatgcaatt cataatcgtt gcgaattgag tcgcggttca acatcatgtc aggcacccat
     7981 gcaccgccga ccaggtgcac acgtttccca ttcacgtaaa aatctctgcg aatccagcca
     8041 tttaccgtgg tcgcttttga actcacggtt cgaataccaa atagaaagga agtgtcgtca
     8101 gagatgtcgt tcccgttgat atattggatg cgcatccggt acaggtcagg attgccataa
     8161 ttatttggcc accataaatg cggtttgttc agcacgaact gctttacatt atcagcattg
     8221 agctcaatgt ctttcttgtc atttgcagca acagaaacat tttgttcgat tatgaatgcc
     8281 ttgccttcga atgtttcagg cgaaataata agtttcagtt tcccgtttga agttgcattt
     8341 gcatgatttg aaagtgtaaa tcgcaaagta agttttgcaa tgcttgtatc aggaaggttg
     8401 ggtaagtctg ttattatatg aggctgctga atgataacct ggccggttgt acgcagatac
     8461 accggctgcc agataccaat gttgcggtcg tgcacttccg gtatccaatc ccatccggca
     8521 gaacaaagca tagtaacatt tttcccaatg tcgccggttg gtcctccgtt ggcataaaaa
     8581 tctccgagcg cattgagctg cggatgagca ggtagaccgg gttcatccag cggataaatt
     8641 tttacggcaa gcacgtttac gccacccgcg tttattgcag aagtcgcatt caaaaaatat
     8701 tctgcaaaca ttcctgccat ctgcgatgaa tcggcgattc ggtttccatt cagccaaact
     8761 tctgcgcggt aattaatgcc tttaaagatg agctgaaaaa attttccctt atctgttgct
     8821 ggtacggaaa atgtcgttcg gtaccaataa ggtttcttcc agggattcgg ttcgccaggc
     8881 aggtaactgt acttttcgag atgatattca tggttgaaag aatcagacgc atcagggatg
     8941 agcatgttgt tcatcccaat gtacggatca ggataaactt tgtttgctac caagccggtc
     9001 agtacagtgc acggaacttt tacggggaac caataattat tagaacgata attggttgtt
     9061 gataaaacag tgccgtcgtc cgatatcgct gccgacgatt gcatatcgaa tttcgtaagc
     9121 tgaacttgtt ttacggtttg agcaaacagc gtagcagttg taaaagcaag aagaaccacg
     9181 tataaaattt ttctcatgac agatcttttg cagcaataaa tttaaggaag agatgtaact
     9241 ggtcttgcac ttatttttgt tacagatgga gcggctcaat tctttgttca aactgctaat
     9301 aattctttta gcttttgttg actgtaataa cgccgcaaag gattttgatc gggatccgca
     9361 ggcaattcat tattcgaaac atgcaaggtg cagaatggaa tgccggcatg ttgacgaatc
     9421 cgaggtgaaa gagatgatcg aaaaaggaga catcaacttt tcaaagagtg agcttaataa
     9481 cgacgcatgt tataaacgtt acgcactgga aggcatgagt cacgacagtc aacgattgcg
     9541 catcattgtt gccgaatgca acgatgaatt gaccgtaata acggtgatcg atcttggaaa
     9601 agattggccg tgtgattgtg aataaagcat ggcgtggtat ttcaaaacaa catttctgtg
     9661 cgcatcttag gaagacggcg gtaaaagaat ttctctactt tcggccgtga aacaaaaaaa
     9721 ccaagttctt caatcgcatt tagctcgatt atgaaaagtt tatggaacga agccgcagcg
     9781 gagcaactga aaggcgattt gctgaagttg cgagtgtaca catcgcaatt attaggagca
     9841 gagcccgacc ttgtgctaca tggtggagga aatacatccg ttaagataag cgaaagcaac
     9901 ttgtttggcg agaatgaaga attgctttac gtaaagggga gtggttggga tctcgcaacg
     9961 atcagggaag aaggattcgc gcctgtgcga atgagcgtgt tgttaaagat ggctcaactc
    10021 gatcggcttt cggatgcgga tatggtgaaa caccagcgtg ctgcaatgac aaatccaaat
    10081 gcacctgctc cttctgtgga ggcgatttta catgccatta taccgttccg gtttgtggat
    10141 cacacgcatg cagattcggt agtaacgatc accaatacac cgggcggaaa aaaacggatt
    10201 gaagaaattt atggcaacga tgtgttgata gttccatatg tgatgccggg atttatctta
    10261 tctaaagaaa tatataaact cacgcaaggg cttgactgga aaacaatcaa agggatcatt
    10321 cttctgaacc atgggatctt tacctttcat gatgaagcca aagaaagtta cgagcaaatg
    10381 atcacgctgg tgagtaaggc cgaacgctat ctgcgaaata aaaaggcaac gattgtcgtg
    10441 gctaaaaaaa agcaaaagcc caatttgatg aaactggcaa gattacgaaa ggctgtttca
    10501 tcaaggatgg gaaacggatg tattgccctg ctgcaagatt cactttcatc catcggcttc
    10561 agcaacctgg aaaatgtttc atccattacc gcgagaggtc caatgacacc cgatcatatc
    10621 attcgcacga aacgtacagc catgatttta ggtgatgagc cggaaaaatc ggtggaacga
    10681 ttttcacagg attacgaaaa atacttcaac aagcatacaa accgaaacct cacgcaactt
    10741 gatgctgccc cgcgatgggc agtgtggccc gggcatgggg tcgttacatt tggtaagagt
    10801 ttggaggaag cgaagatcgt ggctgatatc agcgaacata ctatcaaagc gatccagcag
    10861 gcagaaaaac tcggaggctg gcaatccctt ccgcaaaaag atcttttcga aatggagtat
    10921 tgggagctcg aacaggcgaa gttgaaaaaa tctgcgtcaa caaaaaattt ccagggaaaa
    10981 attgcattgg taacgggcgc cgcaagtggc atcggcaaag catgtgcgat tgcacttgca
    11041 aaagaaggtg ctgttgttgt tgcactcgac atcaacgccg caattcagaa gatgcagacg
    11101 ccgggagtgt ttggaataac gtgtgatgta aggaataaaa cagcattgaa taatgcagtt
    11161 gagaacacga tcaaacagtt tggtggtttg gatctgctga tctctaatgc tggtattttt
    11221 tcttc
//
LOCUS       DASQJI010000044         3124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_771091,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000044 DASQJI010000000
VERSION     DASQJI010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771091"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..401
                     /locus_tag="VEV83_01425"
     CDS             51..401
                     /locus_tag="VEV83_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43798.1"
                     /translation="MQFLALQPFVPSGGDFEKSKQLFVAIGFKINWDAGDYTGFERDG
                     CKFILQKFDNKPFAENFMISVNVSNAQEFWNEVNEKQLPQKFGIRVKEPTEMPYGKEV
                     NMIDLAGVCWHFVE"
     gene            complement(418..1101)
                     /locus_tag="VEV83_01430"
     CDS             complement(418..1101)
                     /locus_tag="VEV83_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43799.1"
                     /translation="MNSIQKILLSVSTIILCCEVAAQTRFWANPYFAPGVSFTSAAIK
                     INGVPSTYDSLLKIDDTSLLKVEVYDKKLASKMLGQNEGKKGVVLVTTRTHKPFEYVI
                     QTTTDSAKYFVMNGDTIFMKASTRASIGGDTTSNTWNKFLEKNLQPQVPADNGAPPGR
                     YWTTVRFFVNTDGSVSNPTIEEDPGYGIGPEVLRLMSKSPAWQPAVYNGRNVKAYQQQ
                     VVIFEVTEM"
     gene            complement(1175..2482)
                     /gene="murA"
                     /locus_tag="VEV83_01435"
     CDS             complement(1175..2482)
                     /gene="murA"
                     /locus_tag="VEV83_01435"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HYK43800.1"
                     /translation="MAVFEVIGGKRLKGEITPQGAKNEALQIISAVLLTADKVTVKNI
                     PDILDVNLLIELLTLLNVKVERVGKDECTFQADDVDVDYLASEDFRQKSSRMRGAVML
                     AGPMLARFKKAYIPKPGGDKIGRRRLDTHIIGFEKLGAKFEHDDNENVFFLKSTELTG
                     TYMLLDEPSVTGTANILMAAVMAQGHTTIYNAACEPYLQQLCRMLNSMGAKVSGIGSN
                     LLTIEGVDELHGTEHTMLPDMIEVGSFIGLAAMTRSEITIKNAGIQHLGIIPDKFRQL
                     GIKMEYIDDDIHIPAQETYEVQRYFDGSTVTISDHPWPGFTPDLLSIILVTAIQGRGS
                     VLIHQKMFESRLFFVDKLIEMGAQIILCDPHRAVVVGLERKQKLRGVIMASPDIRAGV
                     ALLFAALSAEGKSIIQNIDQIYRGYQHIDERLQSLGAAIRKLE"
     gene            complement(2567..>3124)
                     /locus_tag="VEV83_01440"
     CDS             complement(2567..>3124)
                     /locus_tag="VEV83_01440"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK43801.1"
                     /translation="LSDEAIRTAKQLSAELNIPAEFICSNVYDTLDHIREPYDIVFTS
                     YGVIGWLPDLNKWADIISKALKPGGIFFLAEFHPVLWMFDDDFEYIKYAYHNERVIAE
                     TQTGTYADRSADITYEEYSWNHSLSEVMTALIEHGLFIAEFRELNYSYYNCFKKTIRG
                     ENGYWCIKGLENKIPMMYAIKACKT"
BASE COUNT          809 a          716 c          694 g          905 t
ORIGIN      
        1 atcgaaagca aaatcgggag cggcaattag ctttacaaaa aaaaatcgtc atgcaattcc
       61 tagcgcttca gccattcgtt ccatcaggag gtgatttcga aaagtcgaaa caactgtttg
      121 tagccatcgg tttcaaaatc aactgggatg ctggcgacta cacgggtttt gaaagggacg
      181 gctgcaaatt cattcttcaa aaattcgata ataagccttt cgccgagaac ttcatgatca
      241 gcgtgaacgt gagcaacgcg caagaattct ggaacgaagt aaatgaaaag caattgccac
      301 aaaaatttgg aataagagta aaggagccga ctgaaatgcc ttatggcaaa gaagtaaata
      361 tgattgatct tgccggcgtg tgctggcatt ttgtggagtg atctttcatg atcactgcta
      421 catttctgtc acctcgaaga tgaccacctg ctgttgatac gcttttacat ttcggccatt
      481 gtataccgca ggctgccatg caggagactt tgacattagc cgcaacactt caggccctat
      541 tccataacca gggtcttctt ctatagttgg atttgaaacc gaaccgtcag tatttacaaa
      601 gaagcgcaca gtcgtccaat atctccccgg cggagcgcca ttgtcggcgg ggacctgtgg
      661 ctggagattt ttttcgagaa atttattcca ggtgttggat gtcgtgtctc cgccaatact
      721 tgctcttgtt gaagccttca taaagatggt atcgccattc atgacaaaat attttgcaga
      781 atcggtggtt gtctgaatta catattcaaa gggtttgtga gtgcgggttg tgaccagtac
      841 aactcccttt ttgccttcat tttgtccgag cattttggat gctagctttt tatcatagac
      901 ttcaactttt aatagtgagg tgtcgtcgat ttttaaaagg ctgtcgtacg tggacggcac
      961 accatttatt ttaatagcag ccgatgtgaa ggaaacgccc ggcgcgaaat atgggttcgc
     1021 ccaaaaccga gtttgggcgg caacctcgca gcaaagtatt atcgtactga cggaaaggag
     1081 gatcttttgg attgagttca tggcagtagt ttggtttttt aacagagaga ttataaacgc
     1141 tttttcaaac acggacattt gccgaccctt aaaattattc aagctttctt atcgcagctc
     1201 caaggctctg aagtctttca tcgatgtgct gatagccgcg atagatctgg tcaatatttt
     1261 gaatgatgct tttgccttcc gcgctcaatg cagcaaaaag caaagcaact cctgcgcgaa
     1321 tgtcggggct tgccatgatg actccacgca acttttgctt acgttccagg ccaacaacta
     1381 cggcacgatg cggatcgcat aagatgatct gcgcgcccat ctcgatgagt ttgtcaacaa
     1441 agaacaggcg gctctcaaac attttttgat ggatgagcac gctgcccctt ccctggatag
     1501 cagtaaccaa aattatacta agcaggtccg gcgtaaaccc gggccatgga tgatctgaaa
     1561 ttgtaaccgt gctgccgtcg aaataacgtt gcacttcata cgtttcctgc gccggtatat
     1621 gaatatcatc gtcaatatat tccatcttta ttccgagctg acggaattta tccgggatta
     1681 tgccgaggtg ttgaatgccc gcattcttga tggttatctc gctccgcgtc attgcggcga
     1741 gaccgatgaa gctaccgacc tcgatcatat caggtaacat cgtatgctct gtaccatgca
     1801 attcatcaac gccttcgatg gtgagcaagt tacttcctat tccgctgacc tttgcgccca
     1861 tgctgttcaa catgcggcaa agctgttgca ggtacggctc acaagcggca ttataaattg
     1921 tagtgtggcc ctgtgccatt accgccgcca ttaaaatatt ggctgtgccg gttaccgacg
     1981 gttcgtccag cagcatatac gtgccggtga gttccgttga tttgaggaag aaaacatttt
     2041 cgttgtcatc gtgctcgaat ttggcaccta gtttttcgaa tccaataata tgtgtgtcga
     2101 gccttcggcg accgatcttg tcgccacctg gtttcggtat atacgctttt ttaaatcgcg
     2161 ccagcatagg gcctgccagc atgaccgcgc cacgcatgcg gctgcttttt tgccgaaaat
     2221 cctccgaagc gaggtagtca acatcaacgt catcggcctg aaaagtgcat tcatcttttc
     2281 caacacgttc cacctttacg ttcagcagcg ttagtaattc aataagaaga tttacgtcaa
     2341 ggatgtcggg aatatttttg acggtcactt tgtcggccgt gagtagaaca gcggagatta
     2401 tctgcagtgc ttcgtttttt gcaccctgcg gcgttatctc gccctttaat ctttttccgc
     2461 cgatgacttc aaacactgcc ataatctgaa ttcagttgcg aaagataaat ctaatgtgcg
     2521 aattgaaaat ctcgcaattt gaaaaatgcc cgatcgactc ctttactcaa gtcttgcagg
     2581 cttttattgc atacatcatt gggatcttat tttccaaacc tttgatacac cagtagccat
     2641 tttctccgcg aattgttttc ttgaaacagt tgtaataact gtaattgagc tctctaaatt
     2701 ccgcgataaa taaaccgtgt tcgatcaaag cggtcatgac ttcgcttaag ctgtggttcc
     2761 atgaatattc ctcataagtt atgtcagcac ttctgtcagc ataagtgccg gtttgtgttt
     2821 cagcgatcac tctttcatta tgataagcat acttgatgta ttcaaaatca tcatcgaaca
     2881 tccaaagcac cgggtgaaat tctgcgagaa aaaatatgcc tcccggtttt agcgctttgc
     2941 taataatgtc tgcccatttg ttcagatccg gcaaccatcc gatcacaccg tacgaggtaa
     3001 aaacaatatc gtatggctcg cggatgtgat ctaatgtatc atatacgttg gaacaaataa
     3061 attcagcggg aatattcagc tccgcgctta attgttttgc ggttcggatc gcttcgtcgg
     3121 aaag
//
LOCUS       DASQJI010000045         3214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1692376,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000045 DASQJI010000000
VERSION     DASQJI010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692376"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VEV83_01445"
     CDS             <1..1262
                     /locus_tag="VEV83_01445"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK43802.1"
                     /translation="SMFSITYFRNMLSATTSLYRNAFKGLSRNTWFLSLVMLVNRSGT
                     MVIPFMTMYCTQKLHFTLPQAGTVMGLFGGGAIVGAYIGGKITDKAGFYTQQLASLLL
                     GGIMFITVGFLESFVSLCIGTFILSVCNESFRPANAAAIAYYSAPENRTRSYSLNRLS
                     INLGWAVGGGLGGLLASINYHLLFWVDGCTNIVAALLLLKLLPYGARKRNIGEEVIHR
                     KKRAYSDAFYVAFVILAFLFASCFFQLFTIQPVFFKTEWHFNEAFIGLLMALNGIIIV
                     VVEMIVVYSIERKKLNTFFIRSGYLVAALAFACLNILPPGWQTAVLSIVLITIGEMLS
                     MPFMNSFWIERSSAHNRGEYAALYAMSWSVAQIVGPLSGSRIAAHAGFSTLWWTLSSV
                     CVAAAIGILVLEQKLNSSKKQQLVSSA"
     gene            1272..2225
                     /locus_tag="VEV83_01450"
     CDS             1272..2225
                     /locus_tag="VEV83_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HYK43803.1"
                     /translation="MATTKKVSPVFKPNADTGFGVSPDAQGGRFINKDGSFNVVKTGT
                     PLHERFSPYYKLLMMPAWEFTLALLSFFFVVNVFFTIVYLLMDPREFTGVIAESSTDR
                     AFELFFFSAQTFTTVGYGRINPVGHLGGFIASVEALAGLSSFALITGVLYGRFSRPRA
                     YLKFSEKALVGPYQDKTALMFRFVSYKENHTLTDVEVKVTLGLTEHDGKAVFKFFQLP
                     LERSRVDSLSMNWTVVHPIDEESPLFGFDSDDLKVLDAEVYVLVRGFDDVFSNTVLQR
                     TSYRFNEIVFNAKFERMYHENADDTTTIVEINKLNDFKILS"
     gene            complement(2327..2923)
                     /gene="folE"
                     /locus_tag="VEV83_01455"
     CDS             complement(2327..2923)
                     /gene="folE"
                     /locus_tag="VEV83_01455"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HYK43804.1"
                     /translation="MAYTKKEIYAPDRLESLKESYRATIELLGEDTQREGLLKTPERI
                     AKAMLFNTQGYGQDAVAILNSAKFREDVSEMIVVKDIELYSMCEHHMLPFFGKAHIAY
                     IPSCWITGLSKIARVVDVFSRRLQVQERLTTQILGAIKEALDPIGVAVVIEAKHLCMM
                     MRGVQKQNSVTTTSAFSGEFEKVPTRSEFLKLISADLS"
     gene            complement(2969..>3214)
                     /locus_tag="VEV83_01460"
     CDS             complement(2969..>3214)
                     /locus_tag="VEV83_01460"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HYK43805.1"
                     /translation="DSRTGYVIDLKLLSDLIKTEVLKKFDHKNLNLDTEEFKQLNPTA
                     ENIAIAIYHILRPKLGNHLDLQVRLYETERNFVEYPV"
BASE COUNT          785 a          686 c          759 g          984 t
ORIGIN      
        1 actccatgtt ttcgattacg tattttcgca acatgctttc tgcgacaaca tctttatata
       61 gaaatgcatt caaaggcctt tcgagaaaca cctggttcct ttcattggtg atgctagtaa
      121 acaggagcgg gacgatggtg atcccgttca tgacgatgta ttgcacgcag aaactacact
      181 tcacgctgcc acaagcggga acggttatgg gtttgtttgg aggaggcgcg atcgtaggcg
      241 catatatcgg cggcaagatc accgataagg ctggctttta cacgcagcaa ctggcgtcgc
      301 tattgcttgg cgggatcatg ttcatcacgg ttggatttct tgaatcattc gtatcgctgt
      361 gcattggtac atttatctta agcgtatgca atgaatcttt tcgcccggca aacgcagcag
      421 cgatcgcgta ttacagcgcg ccggaaaacc ggacgcgttc ttattctttg aacaggcttt
      481 ctatcaatct cggctgggct gttggcggag gtctcggtgg tttactggct tcgataaatt
      541 atcatctgct gttttgggtt gacggatgta caaacatcgt ggcagcattg ctgcttctca
      601 aacttttgcc ctacggggct cgcaaaagaa atatcggcga agaggtgatc catcgaaaaa
      661 aaagagctta ttcagacgct ttctatgttg cctttgtgat ccttgcattt ctgtttgctt
      721 cttgtttctt ccagttgttt acaatacaac cggtgttctt caaaaccgaa tggcatttta
      781 atgaagcttt catcggattg ctcatggcat taaacgggat catcatcgtc gttgtagaaa
      841 tgatcgttgt ctattcaatt gaaagaaaaa aactgaatac attttttata cgcagcggct
      901 acctggttgc tgcgctcgca ttcgcctgtc tgaatatttt gcctccgggc tggcaaaccg
      961 ccgttttgtc aattgtgctt atcacgatcg gagaaatgtt gtcgatgcct ttcatgaatt
     1021 cattttggat cgaacgcagt tccgctcata accgcggtga gtatgctgcc ttatacgcga
     1081 tgtcgtggag cgttgcgcag atcgttggac cgttatccgg cagtcgcatc gccgcacacg
     1141 cgggttttag tactttgtgg tggacgcttt cgtcggtgtg cgttgctgcc gcgattggca
     1201 tcttagtgct tgagcaaaaa ttaaattcat ctaaaaaaca gcaactggtt tcttctgcat
     1261 aaattttttt tatggcgaca actaaaaaag taagcccggt ttttaagccc aatgcggata
     1321 cgggatttgg cgtgagtcca gacgcacaag ggggccgctt tatcaataaa gatgggagtt
     1381 tcaatgtagt gaaaacgggc acacctcttc acgaaaggtt cagtccctat tataaattgc
     1441 ttatgatgcc tgcgtgggaa ttcacgctcg cgctgctaag cttttttttc gtggtaaatg
     1501 ttttcttcac cattgtttat ctgctcatgg acccgcgtga atttaccggc gtcatagccg
     1561 agagtagtac agaccgggcg tttgaacttt tctttttcag cgctcaaact tttacgacag
     1621 tagggtatgg aagaataaat cctgtcgggc atctcggagg atttattgcg tctgtcgaag
     1681 cgctggccgg gttgtcttca tttgcactca taactggtgt actttacggg cggttttcgc
     1741 ggccacgggc ctacttaaag tttagcgaaa aagcgttggt gggaccgtac caggataaaa
     1801 cagcactgat gttccgcttt gtgtcataca aagaaaatca cacgctcacc gacgttgaag
     1861 tgaaagtaac gttgggatta acggaacacg acggaaaggc tgttttcaaa ttttttcaac
     1921 ttccactaga aaggagtcgt gtggacagcc tttcgatgaa ttggaccgta gttcacccga
     1981 tagatgaaga gagcccattg tttggttttg attccgacga cctcaaggtc ttggatgcag
     2041 aagtctatgt tttggttagg ggattcgatg atgttttttc caacacggtg ttacaaagaa
     2101 catcatatcg ttttaacgag atagtgttta acgcaaaatt tgaaaggatg tatcatgaaa
     2161 atgcagacga tacaacaacg atagtggaaa taaataagct gaatgatttt aaaattttgt
     2221 cgtgatgcgg tggggttatt tggtgattgg gctactggga tatagggtta ttgggctact
     2281 cggttattcg gaacgaccca aatagcccaa taaattaata aactaattaa ctcaaatccg
     2341 cacttatcaa cttcaaaaac tcactacgtg taggcacctt ttcaaattcg ccggagaaag
     2401 cagaagttgt ggttaccgaa ttttgttttt gcacgccgcg catcatcatg caaaggtgtt
     2461 ttgcctcgat cacgacggca acgccgatgg gatcgagtgc ttctttaatc gctcccaata
     2521 tttgcgtcgt taatctttcc tggacctgca gcctgcgtga aaagacatct accacacgtg
     2581 ctatcttgct gagcccggtg atccagcaac tcgggatgta tgcaatgtgt gctttgccaa
     2641 aaaatggcag catatgatgc tcgcacatac tatatagttc tatgtccttt acaacgatca
     2701 tctcgctcac gtcttccctg aattttgccg agttgaggat agcgactgca tcctggccat
     2761 agccctgtgt gttaaacagc atagctttcg caatacgctc gggtgttttc aaaagtcctt
     2821 cccgttgtgt atcctctcca agcaattcga tagtggctct gtaactttct ttcaggcttt
     2881 ccaggcgatc aggcgcgtaa atttctttct tagtgtatgc cataaaattt tctgttttca
     2941 aaattgcatg ttttttttag cggccccgtt atacaggata ttcgacgaaa tttcgttctg
     3001 tttcatataa acgcacctgc aggtcaagat ggttgcctag cttcggcctc aagatatgat
     3061 agatggctat tgcgatattc tccgcggttg gatttagttg cttgaactct tctgtgtcca
     3121 ggttaagatt tttgtgatcg aattttttta agacctctgt tttgatgagg tcgcttagta
     3181 atttgaggtc gatcacataa cccgtcctgg agtc
//
LOCUS       DASQJI010000046        23154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2921144,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000046 DASQJI010000000
VERSION     DASQJI010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 23154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23154
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2921144"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1474)
                     /locus_tag="VEV83_01465"
     CDS             complement(<1..1474)
                     /locus_tag="VEV83_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYK43806.1"
                     /translation="MSVATGSEPIMNEKHTNHLIKETSPYLLQHAHNPVDWHPWGEEA
                     LEKARSADKPILVSIGYSACHWCHVMERESFEDEETAALMNESFINIKIDREERPDLD
                     HIYMDAVQAMTGSGGWPLNVFLTPALKPFFGGTYFPPVRAFNRSSWKEVVIAVASAYR
                     NKKNEIEEQAETLVKHLVAANNLQGGATAGGPSDRASLQTIADNLLKTADKEWGGFGN
                     PPKFPHTFSILYLLRHYHFFGHKPSLEHAVLSLDKLMMGGIYDQLGGGFARYATDRRW
                     QIPHFEKMLYDNALLLEAFTEAYQLTKKKDYAKVIHDTIGFLQREMMSAAGGFYSALD
                     ADSEGVEGKYYTWGIEEVRALLGDESETFCDVFDVSKTGNWEQTNILWMPEPLENFSD
                     GKLGDWSASLEGSKAKLFEARQQRIRPGLDDKIILGWNALMIKSLCKAYAATGEQQYR
                     QLAELNISFLEKNLQKNEEPFFYHSWNKKINSQEAFIDDYA"
     gene            complement(1550..2347)
                     /locus_tag="VEV83_01470"
     CDS             complement(1550..2347)
                     /locus_tag="VEV83_01470"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HYK43807.1"
                     /translation="MLNNGLKKSSGNHTPGQILITQPKPESEKSPYFELERKYNIQLT
                     FFPFIKLESIPARDFRKQKIDVCSFSAVIFTSRNAIDHFFRMSEELKISVSQDNKYFC
                     ITEAVALYLQKFILYRKRKVFYGADGTNKSMFDVINKHKENEKFLYVCSENQQDNEIV
                     SWLKANHCEFQLAFMYRSVSNDVKVVMENKSFDIICFFTPSGVRSLFDNYPQFTQNGM
                     LIGAFGNNTVKAGEDAGLSVNIKAPAPQSPSMVSALDHFLATTVKKK"
     gene            complement(2371..3348)
                     /locus_tag="VEV83_01475"
     CDS             complement(2371..3348)
                     /locus_tag="VEV83_01475"
                     /inference="COORDINATES: protein motif:HMM:NF025459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4271 domain-containing protein"
                     /protein_id="HYK43808.1"
                     /translation="MRYFILIFGLTLTHCALAQDTSVVPQITDSTSVVKPDSGVQNVG
                     TSDTIKSDSVAAVNDTGRAFRRPDSARTARTDSIVSIAAPQMAVKKDSLLKKAAVQLK
                     AGAKRNVPDRDIVFFVLVFILFFLGLIRTAFPKYFNSIFSLSFQATFRQTQTRDQMAQ
                     NVMPAFMLNILFILSGGLFITLFAEFNQWATTDFWQLFVYSTSILAMIYLIKYFVIVF
                     TGWVFNASDSAAEYRFIVFLINKLIGILLIPSLFLMTYADDEIKKISITIGICIAVFM
                     IVLRYLVSVARIRKNLRITAFHFFIYLCAVEIMPLLVIYKILFLRTGNT"
     gene            complement(3384..5177)
                     /locus_tag="VEV83_01480"
     CDS             complement(3384..5177)
                     /locus_tag="VEV83_01480"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYK43809.1"
                     /translation="MAKLTQYISKICCALSFSFLFLSLNAQRSCDLFIISADKDSAFL
                     RSLQLQSSFVDKTSCIQYIHRLPQLLALKGYASSSVDSIREDSASVWIKLFIGNKFTW
                     EKLSISDSANNLLNTLGYHPSEFDHQNFLQQNLEKLYNDVLGHFADNGYPFAKISLDS
                     IFVNGDRISGHLNIQSGPLYHVDTVIVEGNVKISRYFLQQYLQVHDHDVYSQQRLDGI
                     NQRLSALNYLQQSQPWQIEMLNTGAQLHLYLQPTKSNSVNLLVGLLPQSDQNSGKLLF
                     TGEATVGLRNSFGTGETLGLNWLQPQPRSPQLNVVYQQPYIFRSPFGLNLDFQLQKQD
                     SAYLNINGQFGVQYELNQHQSGALIIQASSTSVLSVDTNQVKLTGELPPVADVNTTSL
                     GLQYNFYNTDYRFSPRRGNEFFASGIFGNKNVKENSSITQIKDPNFDGGKLYDSVELH
                     SYQFRLQGSAAKFFPLGRQSTIKVAINAGWFQSPDCFQNELFRIGGFKLLRGFDEESI
                     YTNRYSVETAEYRYLLGRNSWFYGFTDLGWAAYNVNDVKFSHTYLGFGVGLSLETNSG
                     IFSISLAEGKRDDTQINFQQAKIHLGFISLF"
     gene            5275..6399
                     /gene="hemW"
                     /locus_tag="VEV83_01485"
     CDS             5275..6399
                     /gene="hemW"
                     /locus_tag="VEV83_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HYK43810.1"
                     /translation="MAGIYIHIPFCKKACHYCNFHFSISQKEIPKMIEAICAEAALRN
                     DYLHQDIATVYFGGGTPSLITIYDLRFTIEKLRSLFRIVDDAEITLEINPDDISAEKL
                     EGWTSVGINRLSIGVQSFFDEDLQWMNRAHNSVQAKTAIALSKQAGFDNISIDLIYGV
                     PGLTDQRWEQNLETAFAFGIPHLSCYALTVEPKTALKKMIDHNKKEDVNAEKQAAQFE
                     LLMQLTNAAGYEHYEISNFSKPGFRSKHNSSYWQCKPYLGLGPSAHSYNGGSRQWNVS
                     SNALYIESISKKILPQQQEMLSQTQKLNEYIMTGLRTSEGISLKAVEQLSDEPTALQI
                     LKEAQKFIYEKLMGVSDGTLFLTRKGKLFADGIASDLFRM"
     gene            complement(6431..7429)
                     /locus_tag="VEV83_01490"
     CDS             complement(6431..7429)
                     /locus_tag="VEV83_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HYK43811.1"
                     /translation="MQFGILGSGSWGTALAKILTDSGENIHWWVRNNETISHIRQRRH
                     NPHYLSGAYFDTSKLELSSNINFVIEACDTLLLVIPSAYVNQSLGGLNKDALKNKKVI
                     SAIKGILPEKNQLLNEYLAENFNVDLKDYFTVLGPCHAEEVAAEKLSYLTFSGLDADH
                     AEKLASCFNTEFIKTLINPDIIGVQYAAVLKNIYAMGAGIAHGLEYGDNFLSVYIANS
                     ANEMVRFLREVKHEDSTASLNYAASVYLGDLLVTCYSLYSRNRMLGNMIGKGYSVKAA
                     QLELGMVAEGYNASRCVHKTNEQLKVAIPIAEIIYQILWEQLPPAEGFEQIETLLL"
     gene            complement(7576..8958)
                     /locus_tag="VEV83_01495"
     CDS             complement(7576..8958)
                     /locus_tag="VEV83_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYK43812.1"
                     /translation="MSKKKIRWIIGILLLLIVLLVVLSKAGVLGKDEGTKVTAEKAID
                     RNITETVTASGKVFPEVEVKVSPDISGEIVDLTVQEGDTVHRGQVLARIYADIYASQR
                     DEAAAVVAQSQAQVANSQAQLGALKATLDQAQATYNRQKTLLDQKVISQSEFESAQQA
                     YESAKANYAAAQSGIKANQANVQNAMAGLTRASKDVNRATLIAPMDGVVSLLSVKKGE
                     RVAGNSFTLGTEMMRIADLSSMEVQVDVGENDIPKVKFGDTAIVEIDAFNNRKFKGVV
                     YKIANPASLATAAANTSSTSVTNYQVHIRLLPSGYTDLIVKGQPFPFRPNMTASADIQ
                     TQTHAHVLSVPLNAVATRTKKDLEKKDTSKAAKTTAAITPDNSSLGSSEDSDLVEVVF
                     VVQPDSKVKVVPVRTSIQDINYIEITSGLKPGDQVVTGPYDVVSKSMKDGDKVKVVTK
                     DELVQGFQKK"
     gene            complement(8987..10429)
                     /locus_tag="VEV83_01500"
     CDS             complement(8987..10429)
                     /locus_tag="VEV83_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK43813.1"
                     /translation="MRKITRYVLPLLLLLNIGKIQAQEKWDLRRCVDYAMKNNISVQQ
                     ADVQARIADLEVEQAKKNKWPTASFTGNAGGQFGRSISPTTNLYTTNNLFFNQFQLQG
                     GAPIYNWGRLKNIQAAASFNAQAALIDIQKTANDIALSVASYYLQALAANEQVEISRI
                     QISQTKAQYDITKKKVDAGALPELNLVELESQLATDSSNLVTAQGTFDQDVLALKAVL
                     NLDMAVAFEIDTPPVETIPLQPLSELQPDYVFNLASQNWAEQRAYQLRIKGSEKNIQA
                     NKALMYPSFSGFYGLGTNYNNQAIIISDSFPVIIPSQKIGYVKGTLDDVYSFESAYTS
                     YGTSKQKYFDQISHNFNQNIGVGVSIPILNNGNYRITYERSKLDLENVKLQAAQAKQT
                     LQSNIYTAYSNAVSSMEKYNASTKAVASAQKAYDFALKRYDVGLLSTIDLLTNQNNLL
                     RAKLEQLTNHFDYVFKMKVLEFYKGQGVQF"
     gene            complement(10588..10935)
                     /locus_tag="VEV83_01505"
     CDS             complement(10588..10935)
                     /locus_tag="VEV83_01505"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK43814.1"
                     /translation="MFKKLRTVIYHVEDLEKGKEWYKIVTGTDPYFDQPFYVGFDING
                     CELGLDPNMTGVVNGNHSVAYWAVDNIEEAIQKLTGNNAAISSPITDVGDGIKVATVK
                     DPFGNTIGLIEGA"
     gene            complement(10928..12256)
                     /locus_tag="VEV83_01510"
     CDS             complement(10928..12256)
                     /locus_tag="VEV83_01510"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYK43815.1"
                     /translation="MKETRKLALFDITMIVIGLVIGMGIFRTAKDAAAASSSPAFYFS
                     VWILGGLIALCGALTYAEIGSRYPITGGYYKIFAVCYHPSIAFAINCVILISNAASLS
                     GVALIGSEYIAPLLFKDPAPFSEAMIAMSAIVLFYGVNLMGLHMSSKTQNVLMVIKIG
                     MILTLIAALFFPALYNSQSQTLSPISDSITTNKFLMFGMALKAASFSYGGYQQTINFG
                     EEVQNPQRVMPRGIVIGIFVIIALYLAVNFSYYKIIGFEELKNTRGIAAMVVGKMFGE
                     SGRYVISILLFIAVLAYVNVLLLSNPRVMYAMSLDGILPAAFRRKDEKRDVLTVSLTV
                     FAGICVIVLFFADKFEQILSFTIFLDSIGMATSAACIFILRKRTKHLDNAGIYKMKLY
                     PLMPGIFIIAYVFVGTVIAITNPQYAVTGLSVLTVFIILYFITHKKRSNV"
     gene            complement(12348..12707)
                     /locus_tag="VEV83_01515"
     CDS             complement(12348..12707)
                     /locus_tag="VEV83_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HYK43816.1"
                     /translation="MQENSFLGKDSLPEIAPTSDEKTLALLAHILTFVAPILAPLIIY
                     LVKKDQSQFVTYHAKESLNFQITLFVIVVILCITIIGILLLWVVGILSLVLVIVATMR
                     ASEGKLYRYPVSIRLIK"
     regulatory      12797..13007
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            13120..15063
                     /locus_tag="VEV83_01520"
     CDS             13120..15063
                     /locus_tag="VEV83_01520"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK43817.1"
                     /translation="MKKILTTALAAVSIASFAEAQTDSTKFNLLDELVVTATKSPKKL
                     SETGKVLTVITQQQLQRSSSHSIGEILNEQTGLIVGGSTANAGTNQTIYLRGASAGNT
                     LILIDGVPMYDPSGISSEYDIGFLNINQIERIEILKGAQSTLYGSDAVAGVINIITKK
                     ASSKPFAGFADVSAGSYGTINSAAGINGTSGKFRYTVGSSYIHTEGFSSAHDSTEKQD
                     FDKDSYSQSGLNASLGYKFSSRFDVRGSAQFNQYKAGIDAGAYTDDKDYNFKDKNTIA
                     RLTAAYNGENHHVIFNYQYSFISRSLLDDSTDVGGFATYQNGSYKSRSHFVELYDHAA
                     LSKHLEFLLGSDFRHYSTSQSYFLVSFFGPYETALGDSAKVDQESLYASFFIKELSGF
                     NAEIGGRVNHHSIYGWNGTYSFNPSYNINKMWKVFANIASAYRTPSLYELYSEYGNKD
                     LKPEVSETYELGIQLAKERLQSRIVYFKRDIRDVIAYYTDPQTYASQYINADRQKDNG
                     IEAELSFAVLKSLNVTANYSYVDGEITTASPVTSKDTSFFNLYRRPHNVFNFDVRWNY
                     SNVFSVSAHLHTASHYYEAMYGTGPQRIDGYYTLDLYAEYKPVEYLTVFTDARNITDQ
                     QYFELPGYNSKRFNIMAGVRLNF"
     gene            complement(15060..15554)
                     /locus_tag="VEV83_01525"
     CDS             complement(15060..15554)
                     /locus_tag="VEV83_01525"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK43818.1"
                     /translation="MKVFFVLTGLVLLNFASAAPGDTAHLYNPNANAEKEIALAIGKA
                     KAQKKFVMLIAGGNWCSWCKLFNKTVTEDKQLDSLLNANFIVYHLNYSDENKNEKVFS
                     KYAYPQRFGFPVFIILDEKGNRIHTQNSEYLEEGKGYNKKKVMEFFQAWSPGALDPAL
                     YKSD"
     gene            15629..16201
                     /locus_tag="VEV83_01530"
     CDS             15629..16201
                     /locus_tag="VEV83_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HYK43819.1"
                     /translation="MDFNKLLTVTFTLFAVIDIIGSIPVLISLKERLGNIHSLRVTLV
                     SGLFMVVFLFVGEQFLKILNLDIHSFAVGGSIVMFLIGLEMVLGMEIFKQDSEASTGT
                     VVPIAFPIIAGSGTLTTVMSLKANFEQQYILIGILVNLLFVFLVLHLLKWIERILGKA
                     GLIVVRKFFGVILLAISVKIFGSNLAAFGK"
     gene            complement(16369..16440)
                     /locus_tag="VEV83_01535"
     tRNA            complement(16369..16440)
                     /locus_tag="VEV83_01535"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16405..16407),aa:Arg,seq:ccg)
     gene            complement(16594..17052)
                     /locus_tag="VEV83_01540"
     CDS             complement(16594..17052)
                     /locus_tag="VEV83_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43820.1"
                     /translation="MKKQILSLALGLAIFGLANAASGNNNKAAAANEKAHKNFEKQFK
                     DVSNPTWYTLQDGFKAEFTKDGHQTNSVYGKRGNWVYTIEYFTADNLDKNLIDLVKTE
                     YDRYYISGIEKVDCPASDAVYVVHLEDQHSYKTVRISKTDMELVQEFKKG"
     gene            complement(17326..18486)
                     /locus_tag="VEV83_01545"
     CDS             complement(17326..18486)
                     /locus_tag="VEV83_01545"
                     /inference="COORDINATES: protein motif:HMM:NF017634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene cyclase family protein"
                     /protein_id="HYK43821.1"
                     /translation="MKDHYDYIITGAGCAGLSLLRRMMTNRFFDDKNILLIDKSDKTS
                     NDRTWCFWEQEAGFFEDIVFHRWKQIDFFSNDFSARFDMEPYAYKMIRGIDLYTLVLD
                     EAKRHANIDIYNESVTSVDSNDANALVICASRSFSADYVFNSLLFDDWRQNALQKKNI
                     YVLLQHFKGWLIETDKDIFDEHVATFMDFRVSQEKGTTFMYVMPLSKNEALVEYTLFT
                     DKILEPGEYDAELSTYISNFMKIDRYSVKHTEFGVIPMTNYPFSGGEKRVINIGTAGG
                     QTKASSGYTFQFIQKHSDRIIDALTKGEDPLLNKSFLEKRFGLYDRIFLNVLYKKKMR
                     GDELFATLFQKNTLPQVLKFLDNETTLPEEIKIMNSVPLRTFLPASLQEVFS"
     gene            complement(18490..19464)
                     /locus_tag="VEV83_01550"
     CDS             complement(18490..19464)
                     /locus_tag="VEV83_01550"
                     /inference="COORDINATES: protein motif:HMM:NF042637.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6569 family protein"
                     /protein_id="HYK43822.1"
                     /translation="MKLPAFFFSARSLLCIVLLFFGCDVRAQLTYNELTVQYDSPWTY
                     KKLQLIPVRFKGAGDGAASQKITAFENGVISFSDALRRKKISITETSSGGGPDVATLV
                     VKSRSKENILLLSGEMVQGGKQDRAFGKTTIIPAGRHKNYVPVFCVEKGRWDDKPKSF
                     RYAGTADARIRKQIDVTQRQNKVWKEIDNELTSKKKKNKTSAYLQAYNDSTQIDTSYL
                     RYFINRMKASDSSYAGFIAITGNRIINAELFSGTDLCVAAYIEMIKSYMHTLTPADGV
                     PGKKHDEIKAFTDKFLPDKATQKKYLTANGRLYYYGSDVIHLIAYDSP"
     gene            complement(19667..22291)
                     /locus_tag="VEV83_01555"
     CDS             complement(19667..22291)
                     /locus_tag="VEV83_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel family protein"
                     /protein_id="HYK43823.1"
                     /translation="MKKVFLATATLIISLNIFAQFPGANGGKNQPPPAIGHIYGKLVD
                     TTGKPVADASVVLLQNKFDSATKKNKQVLYKGGATKANGEFDFSDLPLFGITMKITAV
                     GYKPYEEKISFQPKANGGSAAPSNNPAGQMASMMGNFDKDLGNIKLQSDANQLQNVTV
                     STSVSALKMDIDKKTFNVDKNIVSSGGTALDVMKNVPSVQVDIDGNVKLRNAAPQIYV
                     DGRPTTLSLDQIPADAIQSVEVITNPSAKYDASGGNAGILNIVLKKNKKTGYNGNLMA
                     GVDSHGGLNGGGNFSVRQGKINLNAAVMANQRHDRTNGTTDRLDFGDTLTHIYQENTS
                     KTNGAFIFGKLGLDYFVTNRTTLSLSGIRVHGQFKPTDVFDKTTTSVFDSGQINSLSV
                     GNSNNTRIFNANGLQFGMVHNFAKKDEQLTADGNYFSGKNEGSALYTTNYYDAIGNHT
                     GNSVQQQLSNGNNQFFTVQTDYTNPLSQKTKLETGLRMQINEIENNNQTYNQAADGEF
                     TKIPGTANNYTNSNKVYAAYATVTSSIKNFGYEVGLRAESSNYHGELTNTGEKFSNSY
                     PISLFPSVFLSQKLKNRQELQLNFSRRINRPNFFQLIPYTDYSDSLNITRGNPNLVPE
                     FTNSVEFSYSKTYKKNNNLLASIYYKHTNDLITRYQDTAYNAASGKTDLINSYINATS
                     AYSYGAEFTSVNYVNKWWDFTLNVNLYKSKINTDNVSQLQQDAMLSWFSKFNNNFKLP
                     ANFSIQLSTSYQSKTNLPVNTGGQQFGPPSQAQAASQGYIEPFWVADIAIKKTFLKNN
                     AAAVTLSMSDIFRSRVNEQVSFNQFFYQDYYRLSNPQLVRLNFTYRFGKMDISLFKRQ
                     SKGQGEGAQEATQMGGTR"
     gene            complement(22493..>23154)
                     /locus_tag="VEV83_01560"
     CDS             complement(22493..>23154)
                     /locus_tag="VEV83_01560"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HYK43824.1"
                     /translation="NFINHIIRIKCNPKNFSRAGYGNMTDMILFYSKTKKYVWNEPRQ
                     KIEIPETDARFRSIDPDGRRYTTTPLHAPGETAKGETGKIWNGMMPPKGRHWRYTAAV
                     MDELDKNGLIEWSSTGNPRKKIYADDVMKAGVKMQDIWLFKDPQNPKYPTEKNLELLK
                     TIIKASSNQDDLVLDAFAGSGTTLVAAQELNRRFIGIDASNAAIDICKKRVSDFDYRS
                     V"
BASE COUNT         6304 a         5173 c         4933 g         6744 t
ORIGIN      
        1 cagcgtagtc atcgataaaa gcttcctggg aatttatctt tttattccag ctgtgataga
       61 aaaatggctc ttcgtttttt tgcaggtttt tttcgagaaa tgagatattc aattctgcaa
      121 gctgacgata ttgttgctcg ccggtggctg cataggcttt gcaaaggctt tttatcatca
      181 atgcattcca gcccaaaatt attttgtcat caagaccggg ccggatgcgc tgctgccttg
      241 cctcgaacaa tttcgccttg gatccttcta aacttgcaga ccaatcgccc agcttcccgt
      301 ccgaaaagtt ttccaggggc tccggcatcc aaaggatgtt tgtttgttcc caattaccag
      361 tcttcgagac atcaaacacg tcgcaaaaag tttcgctctc atccccgagt aacgccctga
      421 cttcttctat accccaggta tagtatttgc cctcaacgcc ttcactatcg gcgtcgagtg
      481 cgctgtaaaa cccacctgca gccgacatca tctcgcgttg caagaacccg atggtatcat
      541 gtataacttt tgcatagtct tttttcttag ttagttggta tgcttcggtg aacgcttcca
      601 gtaacagcgc attatcatac aacatttttt caaaatgcgg tatttgccaa cgcctgtccg
      661 ttgcgtaacg ggcgaagcct ccacccagtt gatcgtaaat ccctcccatc atcaatttat
      721 caaggctcag gacggcatgc tccagcgatg gcttgtgccc gaagaaatga taatgcctta
      781 ataagtataa aatggagaaa gtatgcggaa attttggcgg gttgccaaaa ccgccccatt
      841 ctttatctgc ggtctttagt aagttatccg ctatcgtttg aagcgaagcg cgatctgatg
      901 gcccgccggc agtcgctcca ccctgtaagt tgtttgccgc caccaggtgt ttcaccaacg
      961 tctctgcctg ctcctcgatc tcattttttt tattccggta cgctgaagcg acagcgatta
     1021 caacttcctt ccagctactc ctgttgaagg cgcgcaccgg aggaaaataa gtgccgccaa
     1081 aaaaaggctt caaagcaggc gtcaaaaaaa cattcaatgg ccatccgccg ctgcctgtca
     1141 tcgcctgcac cgcatccata taaatatgat ccaggtcagg gcgttcttcc ctgtcaattt
     1201 ttatgttaat gaaggactcg ttcattaacg cggccgtttc ttcatcttcg aaactttccc
     1261 gctccattac atgacaccaa tgacacgccg agtatccaat actcacaaga atcggcttgt
     1321 cagccgaccg tgctttttct aaggcttctt ctccccacgg atgccagtca acaggattat
     1381 gcgcatgttg taacaggtaa ggacttgttt cttttataag atgatttgtg tgcttttcgt
     1441 tcatgatcgg ttcgctgcct gttgctacag acaaattttg aagcatgcgc attcaaacga
     1501 gtgcgttcaa aaaaacccgt tcaatgaacg ggactggaat tatcgaagct tatttctttt
     1561 tgacggttgt ggccagaaaa tgatcgagcg cagagaccat gcttggactt tgcggtgcgg
     1621 gagccttaat gtttacggaa agcccggcat cttcgcccgc cttcacggta ttattaccga
     1681 acgcaccgat aagcattccg ttttgagtaa actgaggata gttgtcaaat aaactgcgaa
     1741 cgccgctcgg cgtgaagaaa caaataatgt caaacgattt gttttccatc acaaccttca
     1801 catcattgct caccgaccgg tacataaatg caagctggaa ttcgcaatgg ttcgctttca
     1861 gccagctcac aatttcattg tcctgctgat tctcgctgca gacgtaaagg aacttttcgt
     1921 tttccttgtg tttgttgatc acatcaaaca tgcttttgtt cgttccgtct gccccataaa
     1981 aaaccttacg ttttctgtaa agaatgaatt tctgcaggta caatgcgaca gcctccgtta
     2041 tgcagaaata tttattgtcc tggcttaccg aaatttttag ttcctcgctc atcctgaaga
     2101 aatggtcgat agcattgcgg cttgtaaaga tcactgccga gaagctgcaa acatcaattt
     2161 tctgtttcct gaagtcccgg gccggtatgg attctaactt tataaaaggg aaaaaagtta
     2221 gttgaatatt gtatttcctt tccagttcga agtagggtga cttttcgctt tctggcttcg
     2281 gctgggtgat tagaatctga ccgggcgtat gattgccgga cgattttttt aacccgttat
     2341 ttaacatgcg taactactcg atttttttag ttatgtattg ccggttcgaa gaaataatat
     2401 cttgtaaatg acaagcaagg gcattatttc cacggcgcaa aggtaaataa aaaagtgaaa
     2461 cgcggtgatg cgcagatttt tccgaatacg tgcgacggaa acaagatatc gtaaaacgat
     2521 catgaaaacg gcaatacaaa tacctattgt aatagaaatt ttttttatct catcatctgc
     2581 atatgtcatc aggaacaaag atggaataag cagtatccca atgagtttat tgatgagaaa
     2641 aacaataaat ctgtactctg cagctgaatc actagcgtta aagacccacc cggtaaaaac
     2701 aataacaaaa tatttgataa ggtaaatcat ggcaaggatg ctggtcgaat aaacaaacaa
     2761 ctgccagaaa tcagtggtcg cccattgatt gaattctgca aacaatgtaa tgaaaaggcc
     2821 cccggaaagt ataaacaaaa tgttgagcat aaaagccggc attacatttt gagccatttg
     2881 gtctcttgtt tgcgtttgcc tgaacgttgc ctggaatgac aaagagaata tgctattgaa
     2941 atacttgggg aatgcggtcc ttattaaacc gagaaagaag agaatgaaaa caagcacaaa
     3001 aaaaacgatg tcccggtcag gaacatttct ttttgcaccg gcttttaact gaacagcggc
     3061 tttttttaag agcgaatctt tttttactgc catttgaggc gctgcgatgg aaacgatcga
     3121 atcggtgcgg gccgtgcggg cgctatccgg ccgccgaaag gctctgccag tatcgttcac
     3181 cgcagccaca gaatcacttt taattgtatc agaggtgccg acgttttgta caccagaatc
     3241 tggtttcacg acggatgtgc tgtccgtgat ttgcggcaca acactggtat cctgtgcaag
     3301 agcgcagtgg gtaagagtaa gtccgaatat caaaataaaa tatcgcaatc aatttccggt
     3361 tgccgcaaaa gtaattggta cgtttaaaac aggctgataa atccgagatg aatttttgcc
     3421 tgctgaaaat ttatttgggt gtcatcacgc ttgccttccg caagagagat actaaagatt
     3481 ccgctattgg tttcaagcga aagtccaacc ccgaaaccta gataggtatg actgaactta
     3541 acgtcgttga cgttatacgc cgcccagcca aggtctgtaa acccataaaa ccatgaattc
     3601 cttccaagca aataccggta ttccgccgtc tctacagaat acctgtttgt ataaatactt
     3661 tcctcgtcaa acccgcgtaa caacttgaaa ccgccgattc ggaataattc attttgaaaa
     3721 caatcaggcg actgaaacca accggcattt atcgccacct ttattgtcga ctgccttccc
     3781 aacgggaaaa attttgctgc actcccctgg aggcggaact ggtaactatg caactccacg
     3841 gaatcatata atttacctcc atcaaaattg ggatccttta tttgagtaat ggagctattt
     3901 tcttttacat tcttgttgcc aaagatgccg ctcgcgaaaa actcgtttcc gcgcctcggg
     3961 ctaaaccggt aatctgtgtt gtaaaaattg tactgcaaac caaggctcgt ggtgtttacg
     4021 tcagcaacag gcggcagctc gcccgtgagt tttacctggt tcgtatccac actcaaaacg
     4081 ctggttgaag acgcctgtat gatcagagct cctgactgat gctggttgag ctcatattga
     4141 acaccgaact gtccattaat attcaaataa gctgaatctt gcttttgtaa ctgaaaatct
     4201 aaattcagcc cgaatggcga acgaaaaatg tacggttgtt gatacaccac gttcaattgc
     4261 ggcgatctcg gctgtggctg tagccaattt aaacctagcg tctcgccagt gccgaaagaa
     4321 ttgcgcagtc caaccgtcgc ttccccagtg aacagaagtt taccactgtt ttgatcactc
     4381 tgtggcagca aaccgaccaa cagatttacg ctgttacttt ttgtgggctg aagatataaa
     4441 tgtaactgtg cgccggtgtt caacatttca atttgccatg gttgcgattg ttgcaggtag
     4501 ttaagcgccg acaatcgctg gttgatgcca tccagtcgct gctggctata aacatcgtga
     4561 tcatggacct gcagatattg ctgaagaaaa taccttgaga tctttacatt cccttccacg
     4621 ataacggtgt cgacgtgata aagagggcca ctctgaatat taagatgccc tgagattcgg
     4681 tccccattca cgaaaatgct atccaatgag atcttcgcga aaggatagcc attatctgca
     4741 aaatggccaa gcacatcgtt gtacaatttt tcaagatttt gctgcaggaa attttgatga
     4801 tcgaattcgc tgggatgata tccgagggtg tttaataagt tgttcgcaga atcactgatg
     4861 gaaagttttt cccacgtgaa tttgttgccg atgaaaagtt taatccacac tgacgcgctg
     4921 tcttcacgta tagaatcaac agaagatgat gcatatcctt ttaaagcaag taattgcggc
     4981 aaccggtgta tgtattgaat gcaacttgtc ttgtcaacaa aactggattg taattgaagc
     5041 gatctgagaa atgcagaatc cttgtcggca ctgataatga acagatcgca tgaccgttgc
     5101 gcatttaatg ataaaaacaa aaagctaaat gacaaggcgc agcagatctt cgatatgtat
     5161 tgagttaatt ttgccatgct gcatttcatt cttctctgca tgcaaagagg aaagcggaaa
     5221 taaaaaaatt acaaacagta gctttaaaca cttaacaaga ttacaaaact ttcgatggca
     5281 ggcatttata ttcacatccc gttttgcaaa aaggcttgcc attattgcaa cttccacttt
     5341 tccatttctc aaaaagaaat accaaaaatg atcgaggcga tttgcgcgga agccgccttg
     5401 agaaacgact acctgcatca agatattgcg accgtttatt ttggcggggg aacaccgagt
     5461 ctaattacga tttacgatct acgatttacg attgaaaagc ttaggtcatt gtttaggatt
     5521 gtcgacgacg cagagatcac actcgagata aatccggacg atatttctgc ggaaaagttg
     5581 gaaggatgga catctgttgg tataaatcga ttgagcatcg gtgttcaaag tttttttgat
     5641 gaagacctgc aatggatgaa ccgggctcac aactctgtcc aggcgaaaac tgcaattgcc
     5701 ttatcaaagc aggccggctt tgataatata agcatcgatc tcatttatgg cgttcctggt
     5761 ttgacagatc aacgctggga gcagaacctg gagaccgcat ttgctttcgg gataccgcat
     5821 ttgtcatgtt acgcgttgac ggtagaaccg aaaacagctc tgaaaaaaat gatcgaccat
     5881 aacaaaaaag aggacgtgaa cgcagagaag caagcggcac aattcgaatt gttgatgcaa
     5941 cttacaaacg ctgctggtta tgagcactac gagatctcaa acttctcgaa gccgggcttt
     6001 cgcagcaagc ataacagcag ttactggcaa tgcaagcctt atcttggact tggtccgtcg
     6061 gcacattcct ataatggcgg ttcaaggcaa tggaatgtct cgagtaacgc tttgtatatt
     6121 gaaagtatta gtaagaaaat attgccacag caacaggaga tgctaagtca aacgcaaaag
     6181 ctaaatgaat atattatgac gggccttagg accagcgaag gtatttcgct gaaggccgtt
     6241 gagcaactta gcgatgaacc aacagcttta caaattttga aagaggcgca aaaatttatt
     6301 tatgaaaagc tgatgggagt aagcgatggt actctttttt taacgcgaaa aggaaaacta
     6361 tttgccgatg gaattgcttc ggatctcttt agaatgtaag catcgtgcca ttcaacacgc
     6421 tctattgaaa tcaaagcaac agcgtttcga tttgttcaaa gccttcggct ggcggcaact
     6481 gttcccataa aatttgatag atgatctctg cgatcgggat cgccactttc agctgctcat
     6541 ttgttttatg cacacacctg ctcgcgttat agccttcagc taccatgccc aactcgagtt
     6601 gcgccgcttt aactgaatag cctttgccta tcatgttacc aagcatgcga ttgcgactgt
     6661 ataaagaata gcatgtaacg agcaggtctc ccaggtacac cgaagcagca taattaagtg
     6721 aggccgtgga atcttcgtgc ttcacctcgc gtaaaaaacg caccatttcg tttgctgagt
     6781 tggcaatata aacactaaga aaattatcgc catattctaa tccgtgcgcg atgccggcac
     6841 ccatcgcata aatattttta aggacagctg catactggac accaataata tcagggttga
     6901 tcaaagtctt aatgaattca gtgttgaagc atgacgcaag tttctctgca tgatctgcgt
     6961 caagtcccga gaacgtgaga taggaaagct tttcggccgc gacctcttct gcatggcaag
     7021 ggcccaatac tgtgaaataa tctttcagat caacattaaa attttcagcg aggtattcat
     7081 tgagcaactg atttttttcg ggcaaaattc ccttgatcgc ggaaatgacc tttttatttt
     7141 taagcgcatc cttgttcaac ccgccgagcg attgatttac ataagcagaa ggtatcacga
     7201 gcagcaaagt atcgcacgct tcaatcacaa aattgatatt actgcttaac tctagcttgc
     7261 tggtgtcgaa gtaagcgccg ctcagataat ggggattgtg ccgtcgctgg cgtatatggc
     7321 taatggtctc gttattgcgg acccaccagt gaatattttc gccgctatca gtcaggatct
     7381 ttgctaatgc tgtaccccag cttccactcc cgagaattcc aaattgcatg cagtaatgtt
     7441 cgtagtaaag ataggaattt gggttgttgg gttatgggct accgggttat tcgtttattg
     7501 ggttattggc tatttgaact atctctgcgc agtgcactcc taataaaccg atatcccaat
     7561 aaactatcaa actatttatt tcttctgaaa accctgtacc aattcgtctt tggttacaac
     7621 cttcactttg tcaccgtcct tcatgctctt actaacaaca tcgtatggcc cggtcacaac
     7681 ctggtcgccc ggctttaaac cactcgtgat ctcgatgtag ttaatgtcct gtatcgatgt
     7741 gcgcaccggt accactttca ctttactgtc cggttgcact acgaacacca cttccacaag
     7801 gtcgctgtcc tctgaactgc ccaacgaact gttgtctggc gtaattgcgg cagttgtttt
     7861 agcagctttc gaagtgtctt ttttctcgag gtcttttttc gttctggtag ctacagcgtt
     7921 tagcggcact gacaaaacat gagcatgtgt ttgcgtttga atatcggcgc tcgccgtcat
     7981 atttggacga aatggaaaag gttgcccctt tacgatcagg tccgtgtagc cggacggaag
     8041 cagcctgata tggacctggt aattggtgac ggatgttgac gatgtgtttg ctgcagccgt
     8101 agccaacgat gcggggtttg caatcttata aaccacaccc ttgaacttgc gattgttgaa
     8161 tgcatcgatc tcaacaatag ccgtatcccc aaatttcact tttggaatat cattttcacc
     8221 cacgtccacc tgcacttcca tgctgcttag atctgcaatg cgcatcattt ctgtgcccaa
     8281 cgtaaaacta ttgccggcaa ccctctcacc ttttttcaca ctcagcaagc tgacgacccc
     8341 atccatcggc gcgatgagcg ttgccctgtt cacgtctttg ctggcgcgcg ttaaacctgc
     8401 catcgcgttt tgaacgtttg cctggtttgc cttgattccg ctttgggcgg cggcataatt
     8461 tgctttcgct gattcatacg cctgctgcgc tgattcgaat tctgattgcg agatgacctt
     8521 ctgatccaac aacgtttttt gacggttgta agtagcctgc gcctggtcca atgttgcttt
     8581 tagtgcccca agctgcgctt gtgaatttgc cacctgcgcc tgtgactgtg caaccacagc
     8641 cgccgcctca tcacgttgcg aagcatatat atcggcataa attctcgcga gcacttgtcc
     8701 gcggtggact gtgtcgccct cctgtaccgt gagatcaaca atttctcccg aaatatccgg
     8761 gctaactttc acttccactt ccggaaatac ctttccgctg gctgtaacag tttctgtaat
     8821 gttgcgatct atcgcctttt cggcggttac ttttgtacct tcatctttcc ccaacacacc
     8881 cgctttgctt aacacaacca gtagcacgat caacagtaac agtataccaa ttatccatct
     8941 tatttttttc ttgctcataa gaacttaaat tttatgcctt ctggccctag aactgtacgc
     9001 cctggccttt gtaaaactct agaactttca ttttaaaaac ataatcaaaa tgatttgtca
     9061 actgctccag tttagcacga agtaaattat tttgattggt aagtagatcg atggtagata
     9121 gcaatccaac gtcgtatctc tttagcgcaa aatcataagc cttttgcgcc gatgccactg
     9181 cttttgtact ggcattgtac ttttccattg aggaaactgc attactgtat gctgtataaa
     9241 tatttgactg cagcgtttgc tttgcctgtg cagcctgcag tttaacattt tccaggtcaa
     9301 gctttgatcg ttcgtaagtg atcctgtaat taccattgtt caaaatcggg atggatacgc
     9361 ccactccaat gttttgattg aagttgtgac tgatctggtc aaaatatttt tgtttcgagg
     9421 ttccgtaact tgtataagcg ctttcaaaag aatacacgtc gtccaacgtt cctttaacgt
     9481 aacctatttt ttgagacggg ataatcacgg gaaaagaatc tgaaataata atggcctggt
     9541 tattataatt tgtccccaaa ccataaaagc ctgaaaacga agggtacatc agcgctttgt
     9601 ttgcctggat atttttttcc gatcccttta ttcgaagctg atatgctctt tgttcagccc
     9661 agttttgtga cgcgaggtta aaaacatagt caggttgaag ctcactaagc ggttgtagtg
     9721 ggatcgtttc aacaggaggt gtgtctattt caaaagctac agccatatca agatttaata
     9781 cggcttttag agcgagaacg tcctggtcaa aagttccttg cgccgtcacc aggttactac
     9841 tgtctgtagc caactgagat tcaagctcga ctaaatttag ttcgggcaaa gcaccagcgt
     9901 caactttctt tttcgtaata tcatattgcg cctttgtttg cgagatctgg attctgctta
     9961 tttcgacctg ttcgtttgct gccagggctt gcaaatagta agatgctaca ctaagcgcaa
    10021 tatcatttgc tgttttttgt atatcgatca aagccgcctg tgcattgaat gaagctgctg
    10081 cctggatatt tttcaaacga ccccagttat atatgggcgc gccgccctgt aactggaatt
    10141 gattgaagaa aagattattg gtagtgtaca ggttagtggt aggggagatc gaccggccaa
    10201 attgcccgcc cgcatttccg gtaaaagaag cagtgggcca tttgttcttt ttcgcctgtt
    10261 caacctcaag gtcagcaatt cgtgcctgta catctgcctg ctggaccgaa atattatttt
    10321 tcattgcata atccacgcaa cgccgcaaat cccatttttc ctgtgcctga atttttccaa
    10381 tgttcaacaa aagcaacaaa ggcaaaacgt acctggtaat ttttctcatt tttgtataac
    10441 gcattttctt atggaggcgc agtttcctga gtataaagcg ctcatacgca agcaacaaaa
    10501 ataatcgaaa gcctttttcc ggtgttttaa tttttttata agcggaaaac cagcgatgtg
    10561 tcaggcaatg taaaagataa tcattaacta agctccttca atcaacccga tcgtatttcc
    10621 aaacgggtcc ttaactgtgg caactttaat tccatcgccc acatcagtta tgggcgatga
    10681 aatggcggcg ttgttgcccg ttaatttttg aatggcctct tcaatgttat cgaccgccca
    10741 ataagctact gagtgatttc cgtttacaac accggtcata ttcgggtcca ggccgagctc
    10801 acacccgttg atatcaaacc caacataaaa tggttgatcg aagtatggat cagtcccggt
    10861 tactatttta taccactcct ttcctttttc caggtcttcc acgtggtaga taaccgtgcg
    10921 caatttctta aacatttgat ctctttttat gtgtgataaa atataaaata ataaaaacgg
    10981 tcaacacact caagcctgtc acagcatatt gcggattggt gatcgcgatc acggtaccta
    11041 cgaaaacgta cgcgatgatg aatatcccgg gcatcaaagg atacaatttc atcttgtaaa
    11101 tcccagcgtt gtccagatgt ttcgtacgtt ttctcaaaat aaaaatacac gctgccgaag
    11161 ttgccatgcc tatcgaatcg aggaagatcg taaagcttag tatctgctca aacttgtctg
    11221 cgaaaaataa gactatcaca caaatgcctg caaataccgt aaggcttaca gtcaatacat
    11281 ctctcttttc atcttttcgc ctgaatgcgg ccggaagaat tccgtcgagg ctcatcgcat
    11341 acatcacgcg cggattactc agcaataaca cattcacata agcaagaacg gcaatgaata
    11401 ataaaataga gatcacatac cttccgcttt ctccaaacat ttttcctacc accatagccg
    11461 ctatacccct tgtgttcttt agctcctcaa agcctatgat cttgtagtag gaaaaattta
    11521 cagcgaggta cagcgcgatg atgacaaata tgccgatcac tattccgcgt ggcatcacgc
    11581 gctgaggatt ttgtacttct tcgccaaaat ttatcgtttg ctggtaaccg ccatacgaaa
    11641 aggacgccgc cttcaaagcc ataccgaaca ttaagaactt gtttgtggtg atgctgtcgg
    11701 agatcgggga caatgtttgc gattgcgagt tatacaaagc cgggaaaaat aaagccgcga
    11761 tcaacgtgag gatcattccg atcttgatga ccattaaaac attttgggtt tttgagctca
    11821 tgtgcaaacc catcaggtta acaccataaa acaacacgat cgcagacatt gcgatcattg
    11881 cttccgaaaa tggcgccgga tctttaaaaa gaagtggggc aatatattca ctgcctatca
    11941 atgcaacgcc ggatagcgac gctgcgtttg agatcaggat aacacaattg atcgcaaatg
    12001 cgattgacgg gtgatagcac acggcgaata ttttataata gccgccggta ataggatatc
    12061 gtgaacctat ttcagcgtaa gtgagcgctc cgcacagagc gatcaacccg ccgagtatcc
    12121 acactgaaaa ataaaatgca ggagacgaag aagctgccgc cgcgtccttg gccgtgcgaa
    12181 aaattcccat gccgatcaca agcccgataa cgatcatcgt aatatcgaac agtgccaact
    12241 tcctggtttc cttcatgaaa gtaaatgtat gaactacggg agagtaatgt tagtacccac
    12301 tgttcttcag cagcatggct gacgaaatcg ctctcgcgga gaaaggctta cttaatcagt
    12361 cttatactaa ccggatagcg gtacaacttt ccttcactcg ccctcatggt tgcaacgatc
    12421 acgagaacga gcgaaaggat accgactacc cacaaaagca agatgccgat gatggtgatg
    12481 cagagaatga caacgatcac aaacaacgtg atctggaaat tcaatgattc tttcgcgtga
    12541 taggttacaa actgagactg atcttttttt accaggtaaa tgatcagcgg cgccaatatc
    12601 ggtgcgacga aggttaatat gtgtgctaac aaagcgagcg tcttttcatc gctggttgga
    12661 gcgatctccg gcaaagagtc ttttccgagg aacgaatttt cttgcataag gttaattttt
    12721 tgaaaagata ggaaagcctt tttattcttt atgaacatcg ttgaataaat ctttttttga
    12781 acaaggatgt gtcatttaca tttgtgcctg atttggttcc ctgcataagt gccgggatta
    12841 aaagggaagt ccggtgcaag tccggcgcta tccccgtagc tgtaagtaat gcgctcattc
    12901 tcctgaaggg attgagaaac atcttaaaat tttgccactg tttattaatg ggaaggcttt
    12961 aagatgaatt acaagccaga agacctgcca atctttattt cattgagctt tcgggtgaaa
    13021 agcgggatga gcctcttcta agagattcat ttctgatcat ttcatttatt cgaaagctca
    13081 ttcttcaaat cattaataaa actcaaaaga agaatgagca tgaaaaagat tctaaccacg
    13141 gcgcttgccg ctgtttctat cgcgtcattt gcagaagcgc aaaccgattc aacaaaattc
    13201 aatttgcttg atgagctcgt tgtaacagca acaaagagtc ccaagaaact aagcgagacg
    13261 ggaaaagtgt tgactgttat cacgcaacaa caactgcagc ggagcagcag tcattcaatt
    13321 ggagaaattt tgaatgaaca aacaggttta attgtcgggg gaagcaccgc aaatgccggc
    13381 accaaccaaa cgatctattt gcggggggcg tcggccggca acacgctaat actgatcgac
    13441 ggcgttccaa tgtatgaccc atccggcatc agcagtgaat atgatatcgg ttttcttaac
    13501 ataaaccaga ttgaaagaat agagattttg aaaggcgcgc agtcgacctt atacggcagt
    13561 gatgccgttg cgggcgtcat aaacatcatc actaagaaag cctcttccaa acctttcgcc
    13621 ggctttgccg acgtgagtgc ggggagctac ggaacaatta actcagcagc tggtatcaac
    13681 gggacgtcag gcaagttcag atacacagtg gggagttcct acatacacac tgaagggttt
    13741 tcatctgcac atgactcaac tgaaaaacaa gattttgata aagacagtta ttcgcaatca
    13801 gggcttaacg cttcactcgg ctataagttt agttcccgat tcgacgttcg cggctccgcg
    13861 caattcaacc agtataaagc aggcattgac gcgggtgctt acactgacga caaagattac
    13921 aacttcaaag ataaaaatac gattgcacgc ttaacggcag cctacaatgg cgaaaaccat
    13981 cacgtgatat ttaattacca gtacagcttt attagccgca gtttacttga cgattcaact
    14041 gatgtcggtg gctttgcaac gtatcaaaac ggctcttata aaagcaggtc tcatttcgtg
    14101 gaattatatg atcatgctgc cttaagtaaa caccttgaat ttttgttagg cagcgacttt
    14161 cgtcactatt caacaagcca aagttatttt cttgtaagtt tttttggacc atatgaaaca
    14221 gccttgggag attccgcaaa agtggaccag gagagtttat atgcatcatt cttcataaag
    14281 gagctatcgg gttttaatgc agagatcggc ggcagagtga atcatcattc catttatgga
    14341 tggaacggaa cttacagctt caacccatcg tacaatataa acaagatgtg gaaagttttt
    14401 gcaaacatcg cgtccgcata tcgaacgcct tctttatacg agttgtacag cgaatacggg
    14461 aacaaagacc tgaagccgga agtatcagaa acgtatgaat taggaatcca attggcgaag
    14521 gagagactgc agtccaggat cgtatatttt aaaagagaca ttcgtgacgt tatcgcatat
    14581 tatactgatc cgcaaacgta tgccagtcaa tatataaatg ccgacaggca aaaagacaac
    14641 ggtatcgagg cagagttgtc gtttgcagta ttaaaatcgc ttaatgtcac cgcgaattat
    14701 agttatgtag atggagaaat aacaactgct tctcccgtta cgagtaaaga cacgtccttt
    14761 ttcaatttgt acaggaggcc gcacaacgtt ttcaacttcg atgtgaggtg gaactattcg
    14821 aatgtcttca gcgtgtccgc acatttgcac actgccagtc attattacga agcgatgtat
    14881 ggtacagggc cgcagcggat tgatggctat tacactttgg atctgtacgc ggagtataaa
    14941 cccgtcgaat atctgaccgt cttcacagac gcgagaaaca ttactgatca acaatatttt
    15001 gaattgcccg gctacaatag caaacgattc aacatcatgg caggagtgcg cttaaatttt
    15061 tagtcacttt tatataaggc cggatccaac gcaccgggcg accacgcctg gaagaactcc
    15121 attacttttt tcttgttgta gcctttacct tcttcaagat actcggagtt ttgtgtgtgg
    15181 atccggtttc ctttttcatc cagaatgatg aacacgggaa atccaaatcg ctgcgggtaa
    15241 gcatattttg aaaatacctt ttcatttttg ttttcgtcgc tgtagttcag gtggtacaca
    15301 ataaagttcg cattcagcaa agagtcgagc tgtttgtctt ctgttacggt cttattgaaa
    15361 agtttacacc agctgcacca gtttccgccc gcgataagca tcacaaattt tttttgagcc
    15421 ttggctttac cgatggccaa ggcaatttct ttttctgcat ttgcattcgg gttgtataaa
    15481 tgtgcggtat cgccgggagc tgcgctcgcg aaattgagca acaccaaacc tgtcaaaaca
    15541 aaaaatactt tcataagaac aactatagat attaactcct caattcacta ttgaagtaaa
    15601 caaaattaac tttacaaaaa ccaggcccat ggatttcaac aaactgctta cggttacatt
    15661 caccctgttt gctgtgatcg atatcatcgg ctccatacca gtacttatct cactaaaaga
    15721 aaggctgggg aacatacatt cgttgcgcgt tacactcgtc tccggtcttt ttatggtcgt
    15781 gttcttgttt gttggcgaac agttcttaaa aatactgaac ctggacatac attcatttgc
    15841 tgttggcggc tctatcgtga tgtttttaat tggattggag atggtgctgg gaatggaaat
    15901 attcaagcag gacagcgaag caagcaccgg aacagttgtc cccatcgcat tcccgatcat
    15961 cgcaggaagc ggaacgttga caaccgttat gtcgctaaaa gcaaacttcg agcagcaata
    16021 tattttgatc ggcatattgg taaacctgct ttttgttttc cttgtattgc atttattgaa
    16081 atggatcgag cgaattttgg ggaaagcagg actgatcgta gttcgtaaat ttttcggagt
    16141 gatattgctc gcgatctctg taaagatatt cggaagcaat ttggctgcgt ttggaaagtg
    16201 agcgacaacc agtgtcgtga aacgaactcc gatgtgatct cgcccagaat ccccgcccgt
    16261 accggtcaag ccagaattgt gctggtgaag tcttttttgg aaatcctgac aatggccctt
    16321 gtaaaaatgc ttttcaaaac atacgcataa aacataaaag agttgatgtg atctcgccca
    16381 gaatcgaact gggatatcaa gttccggaga cttgcgtact atccgttgta ctacgagacc
    16441 aatgaaagga actgcgaaat taattctttt tgcagagccg cggacgatag aaaattaaaa
    16501 cagttccgca ctccggagag ttaggaactg ttgttaaaaa aatgctcgca acttttaaat
    16561 actccagcac tccttcaaag cctgtaacat ctattatcct ttcttgaact cttgtaccaa
    16621 ctccatgtcc gtcttactaa tgcgcactgt tttatatgaa tgctggtctt caagatgtac
    16681 aacatacacc gcatccgaag ccggacagtc cactttctcg ataccggaaa tatagtacct
    16741 gtcgtactca gtcttgacaa ggtctatcag gtttttgtcc aggttatccg ctgtgaaata
    16801 ctcaatggtg taaacccaat taccacgttt cccataaaca ctgttcgtct ggtgcccatc
    16861 ttttgtgaac tcagctttga agccgtcctg taatgtatac caggttgggt ttgaaacgtc
    16921 tttgaattgt ttctcgaagt ttttgtgagc cttctcatta gctgcagcag ctttgttatt
    16981 gttgccggaa gcagcatttg ctaaaccgaa gatcgcgagg ccaagggcca acgataagat
    17041 ttgctttttc atttgttaga tttttcgttt tgataaatat ttttaattgc cagctttttg
    17101 attcttcaat tgttaatgtg aatcgttcgc ttgcagatta ttcatcgaaa ggaataccat
    17161 aaacaagttc gcaggacgaa aggcgccagt gcattgacaa aaggcttatt atttgtttgc
    17221 tggaaaaagc ggcagaaaaa aaattgttcg ttaccggaca aacttcgtac gatatcggac
    17281 tgattattgg gaaatgacaa atttcatttt aacaattggt cttcatcaag agaaaacttc
    17341 ctgcagtgaa gcaggtaaaa atgtacgaag cggtacgctg ttcatgatct ttatttcttc
    17401 gggtaaagtg gtttcgttgt ccaggaattt taatacctgc ggcagtgtat ttttttggaa
    17461 gagtgtggca aacaactcat caccccgcat cttttttttg tacaaaacat tcaggaatat
    17521 gcggtcatat aagccgaacc gtttttcaag aaatgattta tttaataaag gatcttctcc
    17581 tttcgtcaaa gcatcaatga tccggtccga atgtttttgt atgaattgaa atgtgtaccc
    17641 gctgctggct tttgtttgtc cgcctgctgt gccaatattg atcactcttt tctcaccgcc
    17701 cgaaaaagga taattggtca tgggtatcac tccaaactcg gtatgtttta ccgagtaccg
    17761 gtcaatcttc ataaaattgc tgatataagt tgatagctca gcatcgtact cacctggttc
    17821 taatatttta tcagtaaaca aagtatattc tacgagtgct tcatttttcg agagtggcat
    17881 cacatacata aaggttgttc ccttttcctg gctcacacgg aaatccatga atgttgcaac
    17941 atgctcatcg aaaatatctt tatctgtttc tatcagccac cctttgaagt gctggagcag
    18001 gacgtaaata ttttttttct gaagagcatt ttgtctccaa tcgtcaaaga gcagactgtt
    18061 aaacacgtaa tctgcagaaa aagatcttga agcacaaatc acaagtgcat tcgcgtcgtt
    18121 gctatcaaca gaggtaacgg actcattata gatgtcgata ttggcgtgcc gcttcgcttc
    18181 atccaggacc aaagtataca gatcgatgcc cctgatcatc ttataggcat atggctccat
    18241 gtcaaaacgc gcagaaaaat cgttagaaaa aaaatcgatc tgcttccagc gatgaaacac
    18301 gatgtcctca aagaaaccag cttcctgctc ccaaaagcac cacgttctgt cgttgctcgt
    18361 tttgtcagac ttatcgatca acaaaatgtt cttatcatcg aagaaacgat tagtcatcat
    18421 cctgcgcagc aaactcaaac ccgcacaccc ggcgcctgtt attatataat cgtagtgatc
    18481 tttcacatct taaggcgagt cgtaagcgat caaatggatc acatcgctgc cataataata
    18541 caaccttccg tttgcagtga gatatttttt ttgcgtcgct ttatcgggta aaaacttgtc
    18601 ggtaaacgcc tttatttcat catgcttttt accaggcacg ccgtcagcag gcgttagcgt
    18661 atgcatataa cttttgatca tttcgatgta tgcggccacg catagatcag ttcctgaaaa
    18721 aagttccgca ttgatgatcc tgtttcctgt tattgcgata aaacccgcat agctgctatc
    18781 gcttgccttc attcggttga taaagtatcg caggtaagac gtatctattt gcgtgctgtc
    18841 attgtacgcc tgcaagtatg cagacgtttt attctttttc tttttcgaag tgagctcgtt
    18901 gtcaatctct ttccaaactt tgttctgacg ctgtgtaaca tcgatctgct tcctaatgcg
    18961 cgcatcagcc gtacccgcgt acctgaatga tttcggctta tcatcccatc gccctttctc
    19021 aacacaaaaa acaggaacat aattcttatg gcgtcccgcg ggaatgatcg tcgtcttacc
    19081 aaatgccctg tcttgcttcc cgccttgcac catttcaccg ctgagtaaca aaatattttc
    19141 ttttgaacgg ctcttaacca ccagcgttgc cacgtccgga ccgccgccgg atgaagtttc
    19201 tgttatagag atcttcttcc gacgcagagc atcgctaaag ctgataacac cattttcgaa
    19261 tgcagtaatt ttttgtgatg ctgcaccgtc gccggcacct ttaaaacgta cgggaatcaa
    19321 ctgtaatttt ttgtacgtcc atggactgtc gtattgaacc gtcaactcat tataagtaag
    19381 ttgggcccta acatcacagc cgaaaaaaag taacacgata caaaggagcg atcgcgccga
    19441 gaaaaaaaaa gcaggaagtt tcattattaa ttcaaacgca aactgcctgc atttgttata
    19501 taacatgtat aaggaagagt aagcagtcac tggctgataa aggtaatgcc tcaaccttat
    19561 aaatcggaag agcccgcgcg ggcgcaggct ctttgtgaat aattatcagt tgttgtttga
    19621 actttatcaa tcgtgactac atcagaaatt gcttgcaatt cgtgacctac ctggtgccac
    19681 ccatttgcgt cgcttcctgt gcgccttctc cctgcccctt gctttgacgt ttgaataaag
    19741 atatgtccat cttaccgaac ctgtatgtga agttcagccg cacgagctgt ggattgctga
    19801 ggcgatagta atcctggtag aagaactggt taaaagatac ttgttcgttc accctgctcc
    19861 ggaaaatatc actcatgcta agtgtaacgg ccgcagcgtt gtttttaaga aatgtttttt
    19921 tgatcgcaat atcagctacc caaaaaggtt cgatatagcc ttgagatgct gcctgtgcct
    19981 ggctcggcgg gccgaactgc tggccaccgg tgttgacagg tagatttgtc ttgctttgat
    20041 aacttgtaga aagctggatg ctgaagtttg caggtaattt gaaattgttg ttgaatttac
    20101 taaaccagct cagcattgca tcctgctgaa gttgactaac gttatccgta ttgatctttg
    20161 atttatacaa gttcacgttc agcgtgaagt cccaccattt gttcacgtag tttactgacg
    20221 tgaactctgc tccgtatgag taagcagaag tggcgtttat ataactattg ataagatcag
    20281 ttttacctga cgctgcattg tacgccgtgt cctggtagcg ggtgatcaga tcgttggtgt
    20341 gtttgtaata gatcgatgcg agcaaattgt tattcttctt atacgttttg ctgtatgaga
    20401 actcaacgga attagtaaat tccggtacga ggttcggatt accacgggta atattcaaac
    20461 tatcgctgta gtccgtataa gggatcaact ggaaaaagtt cggcctgtta atgcggcgcg
    20521 agaaattcaa ttgcagctcc tgcctgtttt ttaacttctg gcttaggaac accgaaggaa
    20581 acaagctgat ggggtaactg ttgctaaatt tttcaccggt gtttgtaagc tcgccatgat
    20641 aattgctgct ttctgcgcga agtccaactt cataaccaaa atttttgatt gagcttgtta
    20701 ccgttgcgta ggcagcatac actttgtttg aattcgtgta gttgtttgca gtgcccggga
    20761 tcttcgtgaa ttcaccgtca gcggcctggt tatacgtttg gttgttgttt tcaatttcgt
    20821 tgatctgcat ccttaagcct gtttccagtt ttgttttctg gctgagcgga tttgtataat
    20881 cggtttgaac agtgaagaac tggttgttgc cattcgataa ttgttgctga acggagttgc
    20941 cagtgtggtt gccaatcgca tcataataat tcgtagtata caaagcactg ccttcattct
    21001 tgccggaaaa ataatttccg tcggctgtta actgttcgtc cttttttgca aagttgtgta
    21061 ccatgccgaa ttgcaaacca ttagcattaa atatcctggt gttgtttgaa tttcccacac
    21121 taagtgaatt gatctggccg gaatcaaaaa cgcttgtggt cgtcttatca aaaacatcgg
    21181 ttggcttaaa ttgcccatgc accctgatac cagataaaga caacgttgtt ctgttggtaa
    21241 caaaataatc aaggcccaat ttgccgaaaa taaaagcacc gtttgtttta ctggtattct
    21301 cctggtaaat gtgtgttagt gtgtccccga aatccagcct gtcagtagta ccgttggtac
    21361 gatcgtgacg ttgattcgcc attacggctg cattcagatt tatttttccc tggcgcacgc
    21421 tgaagtttcc gccaccgttc aaaccgccat ggctgtccac acctgccatc aggtttccgt
    21481 tgtaacctgt tttcttattt ttcttcagga cgatattgag gataccggcg ttaccaccac
    21541 ttgcgtcata tttagcagaa ggatttgtga tcacctccac gctttgaata gcgtcggcgg
    21601 gaatttggtc tagtgatagc gtggtcggcc tgccgtcgac atagatctgg ggagctgcat
    21661 tacgcaattt tacattacca tctatatcta cctggacaga cggaacattc ttcataacat
    21721 caagggcagt accacctgag ctgacaatat ttttgtcgac gttaaatgtc tttttatcaa
    21781 tatccatctt caacgctgaa acacttgttg aaacagtgac attctgcaac tggttcgcat
    21841 ctgattgcag tttgatatta ccaaggtctt tatcaaaatt gcccatcatg cttgccattt
    21901 gccctgcagg attattcgac ggtgcagcac tcccaccatt ggctttcggc tgaaaactga
    21961 tcttttcttc gtacggtttg tagcccacgg ctgttatttt catcgtgatg ccgaataagg
    22021 gtagatcgga gaaatcgaat tcgccgtttg ctttagtggc tcctccttta taaagcacct
    22081 gcttattttt cttagtggcg ctgtcaaact tgttttgtaa caggacgacc gatgcgtccg
    22141 cgaccggttt gcctgtagta tcgaccaatt taccgtagat atgtcctatc gcaggcggcg
    22201 gctgattttt tccgccatta gcgccaggaa attgcgcgaa tatgttaaga gagattatta
    22261 aggtagcggt tgcgaggaaa acctttttca tacacgtgtt tttgaactga ggcacaaaac
    22321 tattcaacag taaatgcgat ttttagcaaa tgagacgagt gcatgaaatg atgcgacaaa
    22381 cggtggctat gcgcgtaaat tgaatgaccg ctttgaccgc agtatgcggc aatgtgaaag
    22441 acgtgaaaaa aagcaggacg gatttgaagt ggcggaaata taacaaaccg ctttacacac
    22501 tgcggtagtc gaaatcggat actcgtttct tgcagatatc gatggcggca ttggatgcat
    22561 ctatgccaat aaagcgacgg tttaattcct gcgcggcgac gagcgtcgta ccggagcccg
    22621 cgaaagcgtc gagtacgaga tcgtcctgat tggacgaagc cttaatgatc gtcttgagca
    22681 actccaggtt cttttcggtt ggatattttg ggttttgcgg atctttaaat aaccagatat
    22741 cctgcatttt tacacctgcc ttcatcacgt catctgcgta aatttttttg cgcgggttac
    22801 cggtggatga ccattcgatc aaaccatttt tatccagctc gtccattacg gcagccgtat
    22861 aacgccagtg ccttcccttt ggcggcatca tgccgttcca tatcttcccg gtttctcctt
    22921 ttgcagtttc gccgggcgca tgcaaaggcg tcgttgtata tcttctgccg tcgggatcaa
    22981 tggaacgaaa acgtgcatca gtttccggta tttcaatctt ttgtcgtggt tcgttccaaa
    23041 cgtatttttt tgtttttgaa taaaagagga tcatgtcggt catgttcccg tagcccgccc
    23101 ttgagaaatt ttttggatta cacttaatgc ggataatatg attaatgaaa ttat
//
LOCUS       DASQJI010000047         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1999718,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000047 DASQJI010000000
VERSION     DASQJI010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1999718"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..373
                     /locus_tag="VEV83_01565"
     CDS             101..373
                     /locus_tag="VEV83_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43825.1"
                     /translation="MHCKKLRSAIVACEISFFIVACNNNGTDYHDYDTTSSTSTPRAV
                     DSQIANMPADSSATKTPPTIDSSLNKPIVAEKKPIIPVSKPKLKRN"
     gene            674..1483
                     /locus_tag="VEV83_01570"
     CDS             674..1483
                     /locus_tag="VEV83_01570"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HYK43826.1"
                     /translation="MQQYHELLQHILEHGTPKTDRTGTGTKSWFGYQMRFDLSQGFPL
                     VTTKKIHLKSIVYELLWFLRGETNIAYLKENGVSIWNEWADENGELGPVYGKQWRSWL
                     TSNGETVDQISDAVKQLKNNPDSRRIIVSAWNVADLPDMALMPCHTLFQFYSAEDESG
                     KRRLSCQLYQRSADVFLGVPFNIASYALLTMMMAQVCDMEPGDFVHTFGDVHIYNNHI
                     DQVKLQLSRTPYPLPTMKLNPAVKNIFDFKFEDFTLENYQCHPAIKAPVAV"
     gene            1659..>2123
                     /locus_tag="VEV83_01575"
     CDS             1659..>2123
                     /locus_tag="VEV83_01575"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HYK43827.1"
                     /translation="MILSLVVAASTNNAIGKNNQLLWHLPNDLKFFKNVTWGMPVLMG
                     RKTYESLGNKPLNGRVNLILTTQKNFKREGVVVVNKIKDAIFFAGEHDYKELMILGGA
                     NVYAQTIDDANKIYLTRVHHVFEAADAFFPVIDENKWKLASNQDFSKDDKHTY"
BASE COUNT          647 a          501 c          435 g          540 t
ORIGIN      
        1 gatctaaaag aacttgtccg aacgtcaatg gcatcttctt tgaaatattg atggtattat
       61 tcactggatg attagcattc actcattaaa gcatttactc atgcattgca agaaattaag
      121 atcagcaata gtcgcctgcg aaatctcttt cttcatcgtc gcttgcaaca acaatggaac
      181 cgattaccac gattacgata ctaccagctc cacatctact cccagagctg tagactcgca
      241 aattgctaac atgccggcag acagcagtgc aacaaaaaca ccacccacca tcgacagttc
      301 attaaacaaa cccatcgtcg cggaaaaaaa gcctatcatt cccgtcagta aaccgaaact
      361 gaaaagaaac tgaatgccgg catcagcaca tgccgacaac atttgcaatc gaaaaataag
      421 gcgcttcggt cagccgcttc gaaaaacgtc cggcagctga aaatgatgaa cttaaaaacg
      481 ggttactaaa agtaagcgta catttccccc atcggcttga cggcgtcaaa ccgcctgacc
      541 ggtctttact tcccacgctc ctcgcctgct cgcagctcaa agctccccgc tcatagcctc
      601 cctgtcattc acatcttccc cacagctcgt cgctcacagc ttacggctcg cagcattttt
      661 ttaccttgca cctatgcagc agtatcacga attattacaa catattctag agcatggcac
      721 accgaaaacg gaccggacag gcacaggcac gaaaagctgg ttcggttatc aaatgcgctt
      781 tgatcttagc caggggtttc ctcttgtaac cacgaaaaaa attcatctta aaagtatcgt
      841 ctatgaactt ctctggtttc tccgcggcga aacgaatatt gcctatctca aagaaaacgg
      901 cgtaagcatt tggaacgaat gggcggatga aaacggcgag ctcggtcctg tgtacggcaa
      961 gcaatggcgc agctggctga catcaaatgg cgaaactgtc gatcaaatta gtgacgcagt
     1021 taaacaatta aaaaataacc cggacagcag gcgcattata gtaagtgcat ggaatgtggc
     1081 cgatcttccc gacatggcat taatgccttg ccatactttg tttcaatttt attcagctga
     1141 ggacgaaagt ggtaaacgaa gacttagctg ccagttatat cagcgcagtg cggatgtttt
     1201 tttaggagtg ccgtttaata tcgcgtctta cgctttactc accatgatga tggcgcaggt
     1261 ttgtgatatg gagccgggcg attttgtaca cactttcggc gacgtgcaca tttacaacaa
     1321 tcatatcgat caggtaaaat tgcaattgtc aagaacgccg tatcctttac caacgatgaa
     1381 attaaacccg gcggtaaaaa atattttcga tttcaagttc gaagatttca cgttagaaaa
     1441 ttatcaatgc catccggcga taaaagcacc ggtcgccgta tagggaggag accaagccca
     1501 gtatccccta aaggggagaa agaaactctt ccaaacattc tgaataagtt atttttgata
     1561 cattatttaa cgaaccagct ttagaaagta tttacacgtc attagcggta gtatttactt
     1621 catccagggc tgggctaaac tccctttagg gttggggcat gatcctttca ttagtcgtcg
     1681 cagcatcaac aaacaatgcc atcggcaaga ataatcaatt gctctggcat cttccaaatg
     1741 acctgaaatt ttttaagaac gtcacctggg gaatgcccgt gcttatggga cggaaaacgt
     1801 acgagtctct tggaaataaa ccgttgaacg ggcgcgtcaa ccttatcctc acaactcaaa
     1861 aaaattttaa acgtgaaggt gttgttgtgg tgaacaaaat aaaagatgct attttttttg
     1921 cgggtgaaca cgactataaa gaattaatga tactgggcgg cgcgaatgtg tatgcacaaa
     1981 caatcgatga tgcgaacaaa atttatctca caagagtcca tcatgtattt gaagctgccg
     2041 acgctttctt tcccgtcatc gatgaaaata aatggaagct tgcctccaac caggactttt
     2101 caaaagacga taagcatacc tat
//
LOCUS       DASQJI010000048        13486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1846406,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000048 DASQJI010000000
VERSION     DASQJI010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13486
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846406"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VEV83_01580"
     CDS             complement(<1..726)
                     /locus_tag="VEV83_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HYK43828.1"
                     /translation="MRLIDTHCHLYLQDFSKDLDEVMQRAIDAGVEKFFLPAIDSLVI
                     DDLLGMEKKFPGRCFAMMGLHPCSVKENFKTELQVVNEYINKRSFAAIGEIGLDFYWD
                     TTFVNQQYEGFEMQMNWALEKNLPVVIHTRNAMQETINTVKSFAAKNLTGIFHCFGDT
                     YEMAAQIIDMGFYLGVGGVLTYKKSGLDRVIKKIDLEHIVLETDAPYLTPVPFRGKRN
                     ESSYLKIIAGKLAEVKDISVDEVA"
     gene            complement(865..1485)
                     /locus_tag="VEV83_01585"
     CDS             complement(865..1485)
                     /locus_tag="VEV83_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYK43829.1"
                     /translation="MFYLVRTPSWFIRLNSSLVWNIPTEQKELYLTFDDGPHETATPF
                     VLDQLKAYNARATFFCLGKNVKAYPKIYERILDEGHAVGNHTFSHLNGWKTNNNTYMR
                     DIAEAAKYIDSKLFRPPYGKLSPFVSKLLRSLNYRIVMWEILSGDFDTEVTPEKCLEH
                     VVLYSRPGSVIVFHDSTKAWQRMQFALPKVLQHFNEQGFKFKGIPQ"
     gene            complement(1566..2894)
                     /locus_tag="VEV83_01590"
     CDS             complement(1566..2894)
                     /locus_tag="VEV83_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HYK43830.1"
                     /translation="MKRLLIFLLAASFSLQSPAQEYIPSKENLAAREWFSDAKFGLFI
                     HWGPFSIPGDGEWVMNNRNITVKNYTRLMDFFNPIEFDAAQWVGMAKNAGMKYITLIT
                     RHHDGFSMWDTKASDFNIMNSPYHKDIVKMIADECHKQGIKLFLYYSLLDWRRDDYSY
                     WTGRTGHGTGRTVHGDWNNYIAFMKQQLTELLTNYGEIAGIWFDGYWDQLNNDSDKIN
                     KPHVDWHFGELYALIHHLQPQCLVGNNHHLQPLPGEDFQMFEKDLPGSNTTGFGGASV
                     SSLPLETCETINNSWGFNITDTSFKTTKQLVDYLVRAAGFGANFLLNIGPMPNGEIQP
                     EFKERLAYMGSWLRVYGESIYNTRGGYLRPQSWGAITQRGDTLYVHVLDKGAASVTLQ
                     NFPYSKILKAYLIKDHTPVDAQLHDGAVAIPVKQMNEDQPDEVIAVVVKK"
     gene            3247..3675
                     /locus_tag="VEV83_01595"
     CDS             3247..3675
                     /locus_tag="VEV83_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43831.1"
                     /translation="MKYSELEFSAGRAFMHLLIYCTLMDGVFKEDEETELCKHINDLE
                     IFDSLRLDDEIAIFRTYRPDIDSRLQYFRFLIEKMSPQHPAGIFLHVLELAVSDNEFS
                     SEEDLAYSLLGSVLGLPELHQELLKAAIMDKRLMKIKKHP"
     gene            complement(3688..3930)
                     /locus_tag="VEV83_01600"
     CDS             complement(3688..3930)
                     /locus_tag="VEV83_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HYK43832.1"
                     /translation="MEKTFEYSNGEITIVWKPDLCEHSGVCVRTLPAVYHPKERPWIN
                     PLNATTAELIDQLNQCPSGALSFRYDKKNVDEEGRQ"
     gene            3991..4680
                     /locus_tag="VEV83_01605"
     CDS             3991..4680
                     /locus_tag="VEV83_01605"
                     /inference="COORDINATES: protein motif:HMM:NF018766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HYK43833.1"
                     /translation="MHRVQIIRSRYFKEHWEITLILIISSLYATALELLRIYISPKNN
                     YLFFIWNLFLAWIPYLIGIYLPVAYYTMRSKFFAYALLIIWFLFWPNSPYILTDLLHL
                     KQKQNIPLWFDLGLILSFAWAGLMLGFISLIEIQNIIRKRINKTISWFFACFVLLTGA
                     LGIYIGRYGRLNSWDVFIPGKLYSTLLVSFNDKTTRIDMLGMTGMYAIFLFIGYVTVK
                     LIIKIPDRMAL"
     gene            4833..5594
                     /locus_tag="VEV83_01610"
     CDS             4833..5594
                     /locus_tag="VEV83_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HYK43834.1"
                     /translation="MALFQSGNPTLTQKIFDRSLAQQDAGTMTVRGAINKFGFLLFMV
                     LAGAAYTWHLYYNNQQSTMMTLMWVGIIGGLISVFAIAFKPTWAPYLSPAYGLLEGFF
                     LGAISAVMNDAFAEKYPGLIMQAVGLTFGVAIAMFLLYNFRIIRATERFKSVIFTATL
                     GIAIFYGLTLLLRLFHVDVAFMYDSSMLGICLSLFVVAIAALNLIIDFDMIEKGADMG
                     APKFMEWYGAFGLLVTIVWLYVEILRLLSRFAGRK"
     gene            complement(5689..7107)
                     /locus_tag="VEV83_01615"
     CDS             complement(5689..7107)
                     /locus_tag="VEV83_01615"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK43835.1"
                     /translation="MADLRRTLNFRTTIAIVIGGIIGSGIFMKPSLMAAQLGSPLLLL
                     SVWIVAGCITLFGALSNAEVAAMFPETGGQYIFFQKMYGDGFAFVYGWAAFAVFNTGG
                     NASIAYVCSQYADYFVHLPRLDSQSEHAVFFHLPFIGNIYPLENAGVKSLTIVIIFLL
                     SLINYYSVAYGGALQRFLTALKAIAILCLIGGILFSGKGHFENLFHNAPSRPVSGALI
                     GAYVAAIAGAFWAYDGWNNITFVAGEVQDPQKNIPRSLFVGLFFCIVVYALVNLAYIY
                     VMPVEKLSASSFVAADAATVAWGTIGGSAIALMVIFSTFGTTNANVLSTARVTFAMGE
                     GNRWFRWAGRVQPKFQTPGNALWLNAIWATFLIISGSFDMLTDMLIFVTWFFYGMSAL
                     GVFILRRKFPGIPRPYKVWGYPVVTFLFVAFTTFFLISTLYTDISNYLTGKAPIINSV
                     LGLLITCIGIPLYYLQGRRIVS"
     gene            7190..8575
                     /locus_tag="VEV83_01620"
     CDS             7190..8575
                     /locus_tag="VEV83_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK43836.1"
                     /translation="MKTSYSRRRFVKDVAASGLAVSAIHAPLHVFASPKKEKVRMGMI
                     AVGLRGQSHLDEFLKRNDVEVVAMADPDSYMMKQARKLVQQYGKKAPAEYGNGNYDYK
                     NLLKRDDIDAVMISSPWEWHVEQAIDAMQAGKIPGVEVCGAIKLQDCHDIVNTHHQTK
                     IPVMMMENVCYRRDIMAVLNMVRLGMFGELLHMQGGYEHDLREVLFNDGTPDGSGVEF
                     GEKGFSEAKWRTNHYVTRDGELYPTHGLGPVAVMLDINRGNRLTKLSSVSTKSKGLHR
                     YIVNSPKGGQNHPNAKVKFKEGDIVTTQLQTANNETVVLTHDTSSPRPYNLGFRVQGT
                     NGIWVDNHAGEPTAGLIYFEGKSPEHEWENTKSYMDQYDHPLWKRYSKDAEGAGHGGM
                     DFFVDNAFIECLKRDVEFPLDVYDLATWYAITPLSEKSIAEGGTLQHIPDFTDGKWEN
                     RKPIFGLDDRY"
     gene            complement(8687..9736)
                     /locus_tag="VEV83_01625"
     CDS             complement(8687..9736)
                     /locus_tag="VEV83_01625"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HYK43837.1"
                     /translation="MEQLLAAYGMRPAETTVQPFGSGLINSTWIVASNGHQYILQKIN
                     KAVFTRPDDIDRNIHAIDHYLTNRHPSYTFITPLPAVNGETLLQYEDEYYRLFKFISS
                     TTYVSAPDASVAFEAARQFGMFTKFLSGFDANTLEETIPHFHDIDLRYSQFLRAIEHG
                     NNERIGHSAKLIASLQRHESIVSIYKDIRNDSSFKKRVTHHDTKISNVLFDENNKGIC
                     IIDLDTVMPGYFISDIGDMMRTYLAAATEEETNFDLIEVRDDFFKAIVEGYLGQMIGE
                     LSKQEVNAFVYSGKFLIYMQALRFLTDYLNDDVYYGARYELHNFNRARNQLRLLECLV
                     EKEELYNSIVRKFVG"
     gene            complement(9843..10778)
                     /locus_tag="VEV83_01630"
     CDS             complement(9843..10778)
                     /locus_tag="VEV83_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3078 domain-containing protein"
                     /protein_id="HYK43838.1"
                     /translation="MKKWLFIFFVLALYQSKAQDSTVRILRTEANRTITKTVPDTIHK
                     NWIKGGVFNLNIAQGSLKNWAAGGDEFSISMNLYSNGHAFYKKGKFSWDNNVDINIGY
                     INSSSLGTRKNDDRFDFISKAGYAIGSNFFVSGLLNVRTQFFDGYTYSTPEAPLFSST
                     ALSPAYVVLSPGIDFQPVKNLSIFLSPISSRWVIVANPTLSKIGSYGVDSGKHAMNEL
                     GAFGTITFSSNFTKTVSYNARLDLFSNYEHNPENVDLYMTNLFVAKINRIFSVTWSVD
                     MIYDDDVKIFGPYRNAPRLQLKSMVGVGILVKVGT"
     gene            complement(10960..11814)
                     /locus_tag="VEV83_01635"
     CDS             complement(10960..11814)
                     /locus_tag="VEV83_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HYK43839.1"
                     /translation="MELGIVQTKLSPRLCAYLPLCVKRMKYVLYLFASIFFAGVVSAQ
                     NVLPKPNPPRLVVDDAHVLTAPQLQILEQKLDAFNDTTSNQIAVVTIPTLNDVPVEDY
                     AVKLFREWGIGGSKHNNGVLILVARDDHKIKIEVGYGLEGAITDVMSKDIIENDLAPN
                     FRSGDYFHGLDEATNSLAKAAAGEYKERGTSTSDNNGGSSIIKFIIIFIIVIIILGGR
                     GRRGGGGMFSRRGYGGWWVPGMFMGGGNWGRGGGGGWGGGFGGGGGGGFGGFGGGSSG
                     GGGASGGW"
     gene            complement(11874..12335)
                     /locus_tag="VEV83_01640"
     CDS             complement(11874..12335)
                     /locus_tag="VEV83_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HYK43840.1"
                     /translation="MLSFLKLKQQKFFSPAEEHKIIEAIRTAETQTSGEVRLYIESKC
                     RFVDPLDRAAEIFYQLKMNETASHNGVLVYIATMHRQLAVFADEGIYKKAGQEFWNNA
                     VNAMLLEFKKEHYAEGLVNIILKIGELLKTHFPYDAGTDKNELPDDIVFGR"
     gene            complement(12345..12938)
                     /locus_tag="VEV83_01645"
     CDS             complement(12345..12938)
                     /locus_tag="VEV83_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HYK43841.1"
                     /translation="MKTKNLGLIVIVFLIVVLAGCGCNSYNGFVKGDQAVQNAWSNVE
                     TNYQRRTDLYNSVVKTIQGSANFEKSTLQAVIEARARATSVHVDVNDSTSMAQFQQAQ
                     GQLQGAFSRLLAVAEAYPQLQTTQAFRDFQSQIEGTENRINIARRDYNTQVNDYNLRV
                     RTFPSNLFAGMFGFHSKAYYKADIGSEKAPDINFDIK"
     gene            complement(12998..>13486)
                     /gene="pgk"
                     /locus_tag="VEV83_01650"
     CDS             complement(12998..>13486)
                     /gene="pgk"
                     /locus_tag="VEV83_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HYK43842.1"
                     /translation="ASLCEEDRVETAKDIMAKADEKNVCIHLPSDSIIADKFANDANI
                     SSSMSTNIPHDWMGLDIGPMACDMFSKVIRNSKTILWNGPMGVFEMECFQHGTKTIAH
                     AVADATQKGAFSLVGGGDSVAAVNQFGYADKVSYVSTGGGAMLEFFEGKELPGIAAIN
                     KG"
BASE COUNT         3703 a         3103 c         2879 g         3801 t
ORIGIN      
        1 agctacttca tcaacagaaa tatccttcac ttcagccagc ttacccgcaa tgatttttag
       61 gtaactgctc tcattcctct ttccacgaaa aggcaccggc gtcaaataag gagcatccgt
      121 ttccagcact atatgttcga gatcgatttt ttttattacc ctgtcaagcc ccgacttttt
      181 ataagtcagt accccgccga cgcctaaata aaaacccata tcgattattt gcgccgccat
      241 ctcgtacgta tctccaaagc agtgaaaaat gccggtaagg ttctttgctg caaaggattt
      301 gactgtattt atggtttcct gcatcgcatt ccgagtgtgg atcacgacag gcaaattttt
      361 ttccagtgcc cagttcattt gcatttcaaa accctcgtac tgctgattta cgaaagttgt
      421 atcccagtaa aaatcaagac ctatttctcc gatcgcggca aatgaacgtt tgtttatgta
      481 ctcattgaca acttgcagtt cagttttaaa attctctttt actgaacacg gatgcaggcc
      541 catcatcgcg aagcaacgac ctggaaactt tttttccatg cctaacaagt catcgatgac
      601 caggctatca atggctggaa gaaagaactt ttcaacccct gcatcaattg cacgttgcat
      661 cacctcatca aggtctttgc tgaagtcttg taaatacagg tggcaatgag tgtcgatcaa
      721 ccgcataaac aaaatttact cttttgagta tttttatata caaatttttg gtggggaata
      781 gaattattat ccctattttc gtaacagttt tcatagggta cggattaaaa acgggctaag
      841 gtttctacct tggccttccg ttttttattg ggggatacct ttgaatttga aaccctgttc
      901 gttgaaatgc tgcaaaactt ttggcaacgc aaactgcatc ctttgccagg ctttagtact
      961 atcatgaaag actattactg acccgggccg cgaatacaac acaacatgtt ctaaacattt
     1021 ttccggcgtt acttccgtat caaaatcacc gcttaaaatt tcccacatca ctatccggta
     1081 attcaacgat cgtaatagtt tcgaaacaaa tggagacaat tttccatacg gtggccgaaa
     1141 aagttttgag tcgatatact tcgctgcttc agcaatatca cgcatgtatg tattgttgtt
     1201 tgtcttccat ccgttcaaat gactaaaggt gtgattgcca accgcgtgcc cttcgtctaa
     1261 aattcgttca tagatcttcg ggtatgcttt cacatttttt ccaaggcaaa aaaaagtggc
     1321 tcttgcatta tatgctttga gttgatcaag tacaaaaggc gtagctgttt catgcgggcc
     1381 gtcatcaaac gtgagataca attctttttg ttccgtcgga atgttccaaa ccaatgacga
     1441 attaagccgg atgaaccatg acggcgtgcg aacaagatag aacatgaaca aaattataaa
     1501 atgcggctaa gagactgcga cattcgtctt cgtaatacgc ggaagacttg taagtttttt
     1561 cgatatcact ttttcacgac aaccgcaatt acttcatcag gttggtcctc gttcatttgt
     1621 ttcactggaa tcgctacggc accatcatgt aattgtgcgt cgaccggcgt atgatctttt
     1681 atcaaatacg cctttagtat ttttgaatac ggaaaatttt gcaacgtcac cgacgcggca
     1741 cctttatcaa gcacatgcac atataaagta tcacctcgct gcgtgatcgc gccccagctt
     1801 tgcggtcgca aataaccacc tcttgtattg taaatacttt ctccataaac acgtaaccag
     1861 ctacccatat atgcaaggcg ctctttaaat tctggttgta tctcaccatt gggcatcggt
     1921 ccaatattca ataaaaaatt tgcgccaaat ccggctgcgc gaactaaata atcaacgagt
     1981 tgcttggtgg ttttaaaact ggtgtctgtg atattaaaac cccacgagtt attgatggtt
     2041 tcgcatgttt caagaggaag gctggaaaca gaagctcctc cgaaaccggt agtgttgcta
     2101 cctggcagat ctttttcgaa catctggaaa tcttcgcctg gtaatggctg aagatggtga
     2161 ttatttccga ccaaacactg gggctgtaaa tgatgtatca aagcgtacaa ctctccgaaa
     2221 tgccagtcta catgaggctt atttatttta tctgaatcat tatttaactg gtcccaataa
     2281 ccatcaaacc atattcctgc gatctcacca taattcgtca ataactccgt gagctgttgt
     2341 ttcatgaatg cgatataatt attccagtca ccatgaactg tgcgacctgt tccatgccct
     2401 gttctccccg tccaatagct gtagtcgtca cgtcgccagt cgagaagaga ataatacagg
     2461 aaaagtttta tgccctgttt gtggcattca tcggcgatca tcttcacgat atctttatga
     2521 taaggtgagt tcatgatatt aaagtcagac gcctttgtat cccacatgct aaagccatca
     2581 tgatggcgag ttatgagtgt gatatatttc atgcctgcgt tcttcgccat acctacccat
     2641 tgtgctgcat caaactcaat cggattaaaa aaatccatga ggcgtgtata atttttgacc
     2701 gtgatattcc tgttattcat tacccattcg ccgtctcccg gaatgctgaa cggtccccag
     2761 tgaataaaca acccaaactt ggcatcgctg aaccattccc ttgctgcaag attttctttt
     2821 gaaggaatat attcctgcgc cggcgactga agagaaaaag acgctgcaag aagaaaaatt
     2881 aaaagtcgtt tcatcgttta aaaaattgtt tttaaagata agagaaatcc ggccgttcag
     2941 catgccagta ataattgcac gcgtgaacaa acgcaggcac caattgtttc cgttgaaaac
     3001 actgttgctt ttaccgtcat caaaatggca tagttttaaa tgtgtttaga aaactttcat
     3061 aacatgcgtg attggctcag aacattaata gccggctacg gcgcgtacag gtggggcggt
     3121 ggttgcctcg gaagcatcat tgtttttatg ctgatttatt gggcgttggg acattgctga
     3181 aacgtgcctt tatttcttcc gcataaagcc agaatggatt aacattgcac tcattagaat
     3241 tttttcatga aatactctga gctggagttc tctgccggac gtgcattcat gcacctcctg
     3301 atatattgca cgctgatgga cggtgttttc aaagaggacg aagagacaga attgtgtaag
     3361 catatcaacg atttggaaat tttcgattcg cttcgcctgg atgatgagat cgccatattc
     3421 cggacatacc gccccgacat agattcccgg ttgcaatatt ttagatttct gattgaaaag
     3481 atgagtccgc aacaccctgc cggaatcttt cttcatgtat tggaactcgc ggttagcgac
     3541 aacgaatttt catccgagga agatcttgct tatagcttgc tcggttccgt cctcgggctt
     3601 ccggaactcc accaggaact tttgaaagcc gcaatcatgg acaagcggct gatgaaaata
     3661 aagaagcacc cttgagagca gaaatcttca ctgccttcct tcttcgtcca cgtttttctt
     3721 gtcatagcga aaacttaaag cacctgaagg acattggttc agctggtcta ttaattcggc
     3781 tgttgtagca tttaacggat ttatccaggg cctttctttc ggatgatata ctgcaggcaa
     3841 ggttcttaca caaacgcccg aatgctcgca caagtcgggt ttccaaacga tcgtgatttc
     3901 cccattcgaa tattcaaacg tcttttccat cacctaaaat taccggatat atgctgttct
     3961 attttaaatc tatcttcaat caaaaattca atgcatcgtg tacagatcat tcgcagcaga
     4021 tatttcaagg agcactggga gatcacattg atacttatca tctcctcgct atacgcgaca
     4081 gcactcgaac tgctgcgaat ctacatcagc ccaaaaaata actatctgtt cttcatctgg
     4141 aatttgttcc tggcatggat tccatacctg atcggcattt atcttccggt tgcctattat
     4201 acaatgcggt caaaattctt tgcttatgcg cttttgataa tatggtttct tttctggcca
     4261 aattcgcctt atatacttac cgatcttctt cacctgaagc aaaaacaaaa catcccttta
     4321 tggtttgatc tcgggcttat cctttccttt gcatgggccg ggttaatgct tgggtttatt
     4381 tcgctgatcg aaattcaaaa cataatccgg aaacggatca acaagaccat ctcttggttc
     4441 ttcgcatgtt ttgtgctcct taccggcgcg cttggtattt atataggacg gtacgggcgc
     4501 ctgaatagct gggacgtgtt tattcccggg aaattgtatt caacactttt ggtcagcttc
     4561 aacgataaaa ctacacgcat cgacatgctt ggtatgaccg gcatgtatgc gattttcctg
     4621 ttcatcggat atgtcactgt gaaacttatc atcaagatcc ctgaccggat ggctttatga
     4681 tgcgtaaaaa gcctcttaag gcgccatatc aaagagtcat cggatcttgc ggttaagctg
     4741 ccttacccgg aactaagatt tttataaatt ttaccggcaa aaaactgctt cttgtacttt
     4801 gtattatttt tatgccttaa acaaaacaaa ttatggcact ttttcagtcg ggcaacccga
     4861 ctctaactca aaagatcttt gatcgctcac tggcccaaca agatgccgga actatgactg
     4921 tgcgtggcgc gatcaacaaa ttcggctttc tgcttttcat ggtattggcc ggcgccgctt
     4981 acacctggca tttatattat aacaaccagc aatcgacgat gatgaccctg atgtgggttg
     5041 gcatcattgg cggattgata tcagtttttg caatcgcttt taaaccaaca tgggcgccgt
     5101 acctgtcgcc ggcttacgga ttactcgaag gatttttcct cggcgcgatc tcggccgtta
     5161 tgaatgatgc gtttgcagaa aagtatccgg gccttatcat gcaggcagtt ggacttactt
     5221 tcggtgttgc gatcgcaatg ttcctgctgt ataattttcg catcataaga gctaccgaaa
     5281 gatttaaatc tgtgatcttc acagccacgc tcggtatcgc aattttctat ggactaacct
     5341 tgttgctgcg gctcttccac gttgacgtag cctttatgta cgatagctcg atgctcggca
     5401 tttgcctttc gctgtttgtc gttgctattg ccgcgttgaa tttgataatc gatttcgaca
     5461 tgatcgaaaa aggtgcagac atgggtgctc caaaatttat ggaatggtac ggcgcatttg
     5521 gcttactggt caccattgtt tggctttatg tggagatcct gagattactc agccgattcg
     5581 cgggacggaa ataatttagg aaaaaaatta aaccaggaaa accggctcat actgatccgg
     5641 tttttttgtt tggggcgatc aacaaattca cctgtgcttt gttcgtggtt aagatacaat
     5701 ccgtctccct tggagatagt ataagggaat tccaatgcaa gttatcagca ggccaagcac
     5761 agaatttatg atcggcgcct tgccggtaag ataattgctt atatcagtat ataaagtaga
     5821 tatcaaaaag aaggttgtga aagctacaaa caaaaacgtt accaccggat atccccaaac
     5881 tttgtacggt cgcggtatgc cgggaaattt tcttcttaga ataaaaacgc caagcgcgct
     5941 cattccgtag aagaaccacg tgacaaaaat gagcatgtcg gtgagcatat cgaaagaacc
     6001 actaatgatg aggaacgtcg cccaaattgc attcaaccaa agcgcattgc cgggagtttg
     6061 aaattttggc tgcacccgac ctgcccatcg aaaccatctg tttccttctc ccatggcgaa
     6121 cgttaccctt gcagttgaaa gtacattcgc gtttgttgtt ccaaacgttg aaaaaattac
     6181 cattagcgca atagcagaac cgccaattgt gccccatgcg accgttgctg cgtcggctgc
     6241 cacaaatgat gatgcagata atttttcgac tggcatcaca tatatataag caaggtttac
     6301 cagtgcgtac acgacgatac agaaaaacaa tccgacgaat aaacttcgcg gaatattctt
     6361 ttggggatcc tgaacttctc ccgcaacgaa tgtgatatta ttccatccgt catacgccca
     6421 gaacgctcct gcgattgcgg caacgtacgc gccgatcaat gctccactca ccggccttga
     6481 gggtgcattg tgaaaaagat tttcaaaatg tccttttccc gaaaataaaa tgccaccgat
     6541 caaacacagg attgcaattg cttttaatgc ggtgagaaat cgctgaagcg cgccaccgta
     6601 tgctacgctg tagtaattaa taagacttaa taaaaaaatg atcacgatag tcagcgactt
     6661 tacgcctgca ttttccaatg gataaatatt accgataaat ggcaaatgaa aaaagacggc
     6721 atgctcggat tgtgaatcaa gccggggcag atgcacgaag taatcagcat actgagaaca
     6781 cacataagcg atcgacgcat tcccgccggt attgaagact gcgaatgcag cccatccata
     6841 cacaaatgca aatccatcac cgtacatttt ttggaagaaa atatattggc cgcccgtttc
     6901 ggggaacatg gctgcaactt ccgcattgct taatgcgcca aataaagtaa tgcagccggc
     6961 aacgatccaa acactgagca ataataatgg cgatccgagc tgcgcggcca tcagcgaagg
     7021 tttcataaaa atgccagagc cgatgatgcc gccaattaca atagcaatgg ttgttctgaa
     7081 atttaatgtg cgcctgagat cggccatgaa gcaggttgta ttgacttcgg aaaatacagt
     7141 atttaaaaat aattgaagtt tattatgttt acgcttcaat taactaacga tgaaaacaag
     7201 ttatagccgc aggcggtttg taaaagacgt tgctgcatca ggccttgcag tttctgcgat
     7261 tcatgctcct ttgcacgtct tcgcttcgcc aaaaaaggaa aaagtgcgga tggggatgat
     7321 cgcggtaggt ttgcgcggac aatcacatct tgacgaattc ttaaagcgga acgatgttga
     7381 agtagttgcg atggccgatc cggatagcta catgatgaag caggctcgga aacttgttca
     7441 gcaatacggc aaaaaagctc ctgcggaata tggcaacggc aactacgatt acaaaaattt
     7501 attaaagcgc gacgatattg atgcggtcat gatctcctcg ccgtgggaat ggcacgtgga
     7561 gcaggcgatc gacgcaatgc aggcaggaaa aattccgggc gttgaagtat gcggcgcaat
     7621 caaattgcaa gactgccacg atatcgtaaa cacacatcat caaacaaaaa ttcctgtgat
     7681 gatgatggaa aatgtttgtt accgcagaga tatcatggca gtgctcaata tggtaaggct
     7741 cggcatgttt ggtgaactgc ttcacatgca gggcggatac gaacatgacc ttcgcgaagt
     7801 gctgttcaac gatggcacgc ccgatggcag cggtgttgag tttggtgaga aaggattcag
     7861 cgaagcaaaa tggagaacga atcactacgt aacgcgggat ggcgaattgt atccaacaca
     7921 tggcctcggt cctgtggccg taatgcttga cattaatcgt ggtaaccggc taacaaagct
     7981 ttcgtctgta tcaacaaaat ccaaagggct gcatcggtat atcgttaata gtccgaaggg
     8041 cgggcaaaat catccgaacg caaaagtaaa atttaaggaa ggtgatattg taactactca
     8101 acttcaaacg gcaaacaatg aaacagttgt tttaacgcac gacacgtcat ctccccgtcc
     8161 gtataatctt ggctttcgcg tgcagggcac aaacggcatc tgggtcgaca atcatgcagg
     8221 cgagccaaca gcaggcttaa tttattttga aggtaagagc cccgaacatg agtgggaaaa
     8281 cacaaaatca tacatggacc aatatgatca tccgttgtgg aaacgatatt caaaagatgc
     8341 cgagggtgcc ggtcatggcg ggatggattt ttttgtcgac aacgcattta tcgaatgttt
     8401 gaaacgagat gttgaattcc cgttagacgt gtatgacctg gcaacgtggt atgcgatcac
     8461 acccttaagt gagaaatcaa ttgcagaagg agggacgctg caacatatcc ccgatttcac
     8521 ggacggcaaa tgggagaatc gcaaaccgat attcggattg gacgacaggt attagaaatg
     8581 agtaatgagt gatcaatcat gagcgaaggg aagagtaaag tcaaaggttt agagtctgca
     8641 aaccaataac ccaataaccc aataacccaa taaaccagtt aaccaatcac ccaacaaact
     8701 ttctgacaat agagttatac aattcctctt tttcaaccaa acactccagc aatcgcaact
     8761 ggtttcttgc gcggttgaaa ttatgcagtt cgtatctcgc gccatagtaa acatcgtcat
     8821 tgagataatc ggttagaaaa cgaagagcct gcatgtagat caaaaatttt ccggagtaaa
     8881 caaatgcatt tacctcctgc ttcgagagct caccgatcat ctgtccaaga taaccctcga
     8941 cgatcgcttt gaagaaatcg tcccttactt cgatcagatc aaaattggtt tcttcttcag
     9001 tggcagccgc gagataagtg cgcatcatat cgccgatatc gctaataaag taaccgggca
     9061 taacagtatc aaggtcgatg atgcaaatgc ctttgttatt ttcatcgaac aacacattgc
     9121 tgatcttcgt gtcgtgatgt gttactcttt ttttgaaaga tgaatcgttt ctaatgtcct
     9181 tatatatact gacgatgctt tcatgacgtt gtaatgatgc gatcaatttt gccgagtggc
     9241 cgatcctctc gttattcccg tgctcaatgg cccggagaaa ttgtgaataa cgcagatcga
     9301 tatcatgaaa atgcggaatc gtttcctcca gggtattcgc atcaaagcca gataagaatt
     9361 tggtaaacat tccaaactgt ctggcggcct caaaagctac ggacgcatcg ggagccgata
     9421 catatgttgt cgacgaaatg aacttaaaga ggcggtaata ttcatcttca tattgaagaa
     9481 gtgtctcgcc attgacggcg ggaagcggag tgataaatgt gtaagacggg tggcggttcg
     9541 tcaagtaatg gtcgattgca tgaatgttcc ggtcgatgtc atccggcctc gtaaaaaccg
     9601 ctttgtttat tttttgaaga atgtattggt gtccgttgct ggcgacgatc catgtactgt
     9661 tgatcagtcc cgatccaaat ggctgaactg tcgtctctgc cgggcgcatg ccgtatgcgg
     9721 caagcaattg ttccatggat tttttttgaa agataacagc ttatcatttt ccgcgatgga
     9781 taaaaattcc tggccgcctc gagatgatcc gcgcacatat gacgggcgaa taacaagcag
     9841 cactatgtac ccactttaac gaggataccg acaccgacca tcgattttaa ctgaagtcgc
     9901 ggcgcgttcc ggtaaggacc gaatattttc acatcatcat cgtagatcat atcaacgctc
     9961 caggtaacag aaaagatccg gttgatcttg gcaacgaaca aatttgtcat ataaagatcc
    10021 acgttctcgg ggttgtgttc ataattggag aagagatcca gccgtgcatt ataactaacc
    10081 gttttggtga agttggaact aaaagttatc gttccaaatg cacctaattc attcatcgcg
    10141 tgcttcccgg aatcgacgcc atacgagccg atcttcgaga gcgtcgggtt tgcaacgatc
    10201 acccatcgtg atgagatcgg tgaaagaaag attgataaat tttttacggg ctggaaatcg
    10261 atgccagggc ttagcacaac gtaagccggc gacaaagccg tcgatgaaaa caacggcgcc
    10321 tccggcgttg agtacgtgta cccatcaaag aattgggttc gcacgttaag taagccggac
    10381 acgaaaaaat ttgagccgat agcatatccg gcttttgata taaagtcaaa tcggtcatca
    10441 ttttttcgcg ttcccaaact gctgctgtta atgtacccga tgttgatgtc aacattattg
    10501 tcccacgaaa attttccttt cttgtagaac gcgtgtccgt ttgaatacag gttcatcgaa
    10561 attgaaaatt catctccgcc tgctgcccag ttctttaacg agccctgcgc tatgttcaaa
    10621 ttaaagacgc cgcctttgat ccagtttttg tgaatcgtat cgggaactgt tttagtgatg
    10681 gttcggttgg cttcggttct taatatccga acggttgagt cttgtgcttt gctttgatat
    10741 aatgccagta caaaaaaaat gaaaagccat ttcttcatta cggttttttt tggctgactt
    10801 gcaaaaatga tgaaatgttt tgcaggtacg tgcggcggta ggctcatcat gactgcagga
    10861 ataacgaatg ttattgttgc tgcagtgaaa gcgatgaata aaatttatgt gaaaaattaa
    10921 tggtcaacta aaatcatgga acgggttgtc gtgccaaggt caccatccgc cgctcgcgcc
    10981 gccgcctccg ctactacctc caccaaaacc tccgaagccg ccacctcctc cgccaccaaa
    11041 cccaccgccc cagccaccac cgccgcctct tccccaattg ccaccaccca tgaacatgcc
    11101 cggaacccac cagcctccat agcctctgcg gctaaacatg ccgccgccac cacgacgtcc
    11161 acgcccacca agaatgataa taacaatgat gaagatgatt atgaatttga taatagagct
    11221 gcctccgttg ttatcacttg tgctggtgcc ccgctctttg tactcgcccg cagccgcctt
    11281 cgcgagtgag ttggttgctt catccagccc atgaaaataa tcgccgctcc tgaaattggg
    11341 cgcaagatca ttttcgatga tgtcttttga catcacgtca gttatcgcac cctctaaacc
    11401 atagccaact tcgatcttta ttttatgatc atccctggca accaggatca gcactccgtt
    11461 attatgtttc gatccgccaa ttccccattc gcgaaataat ttcactgcat agtcttcaac
    11521 cggcacatcg ttcaatgtgg gtatcgtaac aacagcgatc tggttgcttg tcgtgtcgtt
    11581 gaatgcatcg agtttttgtt cgagtatttg cagttgcgga gctgtcagaa cgtgtgcatc
    11641 gtcaaccacg agccgcggcg ggttcggttt cggcaaaacg ttttgagcag aaacaactcc
    11701 tgcgaaaaag atggaggcaa ataaataaag aacgtacttc attcgcttca cgcaaagcgg
    11761 caaataggcg caaaggcgag gcgaaagttt tgtttgcacg attccgagtt ccatttgtat
    11821 ttattacagc ttattcacaa ttctgtgaat gccatggcgc ctttgcgtga agatcatctt
    11881 ccaaacacaa tatcatcagg caattcattt ttatctgtac cggcgtcgta agggaaatgt
    11941 gttttcaaca gctccccaat cttcagaata atgtttacaa ggccctcggc ataatgctcc
    12001 tttttgaatt ccagcagcat cgcattcacg gcattgttcc aaaactcctg cccggctttt
    12061 ttataaatgc cttcgtctgc aaaaacagca agctgcctgt gcatcgtagc gatatagaca
    12121 agcacgccat tatggcttgc agtttcgttc atttttaatt gatagaaaat ttctgcagca
    12181 cggtcgagcg ggtctacgaa ccggcacttg ctctcgatgt acaggcgcac ttcaccgctg
    12241 gtttgagttt cagcagtacg aatggcctca attattttat gttcctctgc aggtgaaaaa
    12301 aatttttgct gcttaagttt caaaaatgag agcatcagca aaaattattt tatatcgaaa
    12361 ttaatgtcgg gcgctttttc cgacccaatg tcggctttat agtaagcttt tgaatgaaag
    12421 ccgaacattc cggcgaacaa attgctcggg aatgtgcgta ccctgaggtt gtaatcgttc
    12481 acctgtgtgt tatagtcccg gcgcgcaata tttatccggt tttctgtgcc ttctatctgc
    12541 gactgaaaat cccggaacgc ctgcgtggtt tgtaattgcg gataggcttc agcgactgcg
    12601 agcaacctgg agaatgctcc ctgcaactgg ccctgcgcct gttggaattg tgccatcgaa
    12661 gtggagtcgt tcacgtcaac atgtacactc gttgcccttg ctcttgcttc tatcactgcc
    12721 tgcaaagttg atttttcaaa attggcagat ccctgtatag tttttaccac gctgttgtag
    12781 agatcggtac ggcgttggta attcgtttca acattactcc atgcattttg cacggcctgg
    12841 tctcccttta caaatccgtt atagctgttg caaccgcagc cggcaagcac aactatcaaa
    12901 aacacgatga caattaaacc gagatttttt gttttcatgc ttgaatttta agaggcaaat
    12961 ttactgcatt tgaaaatcta aatgatgacg tcagttgtta acctttatta atagcagcaa
    13021 tgccgggcaa ttcttttcct tcaaaaaact caagcattgc gccaccgccc gtcgaaacgt
    13081 aacttacttt atcggcataa ccaaactggt taaccgccgc cacgctgtcg ccaccaccaa
    13141 ccagtgagaa ggcgcccttt tgtgttgcgt cggcaacggc gtgtgcaatt gtttttgtgc
    13201 cgtgttgaaa gcattccatc tcaaaaactc ccatcggccc gttccacaag atcgttttcg
    13261 aattcctgat cactttactg aacatgtcgc acgccatcgg cccgatatcc agtcccatcc
    13321 agtcatgcgg aatatttgtg ctcatcgaag aggagatgtt tgcgtcgttt gcaaacttgt
    13381 ctgcgataat tgaatcgctc ggcaaatgaa tgcacacatt tttttcgtca gcctttgcca
    13441 tgatgtcttt tgcagtttcg acccggtctt cttcgcacaa tgatgc
//
LOCUS       DASQJI010000049         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_617684,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000049 DASQJI010000000
VERSION     DASQJI010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617684"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..947
                     /locus_tag="VEV83_01655"
     CDS             81..947
                     /locus_tag="VEV83_01655"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HYK43843.1"
                     /translation="MSNANGNSCPVPVGTLVIIGGKESKGEMPENHKAPEGYDPLEVL
                     RTFSELLPKNNVHVEVVTSGSSQGDESFREYKKLFKKLGIEDVGHIHHQNRKEALDDD
                     LEERIKIADGVFFSGGDQLLLTSFYGGTPFLTMLKEKYIKHKIVIAGTSAGAMALSTP
                     MIYSGSQEEQQITNEIKVTTGLEFIKDVCIDTHFVHRGRLLRLAQVVATNPTSIGVGI
                     DEDTAIIVRDGLEAEVKGSGVVVILEGFDISYTNVDGKPDQPPLSMRDIRMHILAHQD
                     KYTFKQTNPPHQ"
     gene            1159..>2088
                     /locus_tag="VEV83_01660"
     CDS             1159..>2088
                     /locus_tag="VEV83_01660"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HYK43844.1"
                     /translation="MIKAVVLIATVLNFLPATTKAYSVLTHEAIVDASWEKSIQPLLL
                     KKYPGATADELNDARAYVYGGAIMPDMGYYPFGNKFFTDLVHYVRSGDFVTALLEESQ
                     DLNEYAFAVGALCHYNADKYGHMIGVNRSAPLIYPDVKEKYGDVVTYAEDKTSHLRTE
                     FGFDVLQTARGNYLPTSYHNFIGFEIAKPVLQRAFMKVYGLDIDDVFGNFSLSVSTFR
                     FAVKDLFPEITKAAWASKKSDIKKTNPASTRRSYIYKMRTSAYNKQFGKERTKPGFFA
                     GILGFVIKISPKIGPLKAMKFKPPTPDAEKLFTE"
BASE COUNT          601 a          454 c          489 g          544 t
ORIGIN      
        1 cacagtgttt tcatttttgt gtcggtgttc ccacaattta tttgtacgct ttttgtaatc
       61 agaacgtaaa ccgttaacct atgtcaaacg caaatggcaa ctcttgcccc gttcctgttg
      121 gcacgcttgt tattattgga ggaaaagaaa gcaagggtga aatgccggag aatcacaaag
      181 cgccggaagg atatgaccca ctcgaagttt taaggacatt ttccgagcta ttacccaaaa
      241 acaacgtgca tgttgaggta gtcacttccg gctcatcgca gggagacgaa tcattcaggg
      301 agtataaaaa attgttcaaa aaacttggga tcgaagatgt ggggcacatc catcatcaga
      361 atcgaaaaga agcattagac gacgacctcg aggaacgaat aaaaattgct gacggagttt
      421 tcttcagtgg cggcgaccaa cttcttctga cttcttttta tggggggacg ccatttctta
      481 ccatgctcaa agaaaaatac ataaagcaca aaattgtcat cgcaggcaca agtgcggggg
      541 caatggccct ttcaacaccg atgatctatt ccggcagcca ggaagagcag cagataacca
      601 atgaaataaa agtaacaacc ggcctcgaat tcattaaaga cgtttgtatc gacactcatt
      661 tcgtgcaccg cggaagatta ttaagattgg cccaggtggt ggcgactaat ccgacctcga
      721 tcggtgtagg cattgacgaa gacacagcca ttattgtgcg tgatggcctg gaagcggaag
      781 tgaaaggcag tggtgtggtt gtgatcctcg agggatttga tatttcatac accaatgtag
      841 acggcaagcc tgatcaacca cctctttcta tgcgggatat tcgaatgcat atccttgccc
      901 accaggataa gtacaccttt aaacaaacga acccgccaca ccaataatcg ttttttgttc
      961 aatgttcatc gcgcgtcctt ccggaaaagg taaggtacac ggttacagaa agttgggcgg
     1021 ttttatacac atttcggtgg atcaatcggc gttcacattc tttttgcatg aaaatgaagc
     1081 gcacagatga aaaatctccc gttaacagcc agccggctat aattggaagg atagttgcag
     1141 ttatatgttt tttggcttat gatcaaagca gtagttctta tagctaccgt acttaatttt
     1201 ttgccggcta ccacgaaagc ttattcggtg cttacccatg aagcgattgt ggatgcaagt
     1261 tgggaaaagt ctattcaacc cctgttgcta aaaaaatatc cgggggcgac ggctgacgaa
     1321 ttgaatgatg cgcgggccta cgtgtacggc ggagcgatca tgcctgatat gggttattat
     1381 ccgtttggca acaagttctt caccgatctt gtgcattatg tgcgcagcgg cgactttgta
     1441 accgcattgc tcgaggagtc gcaggatctg aatgaatatg cattcgcggt tggtgcgctt
     1501 tgccattaca acgccgacaa atatggccac atgataggcg tgaaccgttc agctccgttg
     1561 atataccccg acgtaaaaga aaaatacggt gacgttgtta cctacgccga agacaaaact
     1621 tcacacctga gaacggagtt tggttttgat gttttacaaa ctgctcgggg caattacctg
     1681 cccacttcct atcacaattt tatcgggttt gagatagcta aaccggttct tcaaagagcg
     1741 tttatgaagg tctatgggct ggatattgac gacgtgtttg gaaatttttc gctttcagtg
     1801 tcgacctttc gttttgcagt aaaagacctg ttccccgaaa tcaccaaagc ggcctgggcg
     1861 tcaaaaaaat ccgatattaa aaaaacgaac cctgcttcca caagaagatc ctacatatat
     1921 aaaatgagga cctcggctta caataagcag tttggaaagg aacggacgaa gcccgggttt
     1981 tttgcaggca tacttggatt tgtgataaaa atttctccaa agatcggccc gctgaaggcg
     2041 atgaagttca aaccaccaac accggacgct gaaaaattat ttaccgaa
//
LOCUS       DASQJI010000050         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1539113,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000050 DASQJI010000000
VERSION     DASQJI010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539113"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1207
                     /gene="nuoH"
                     /locus_tag="VEV83_01665"
     CDS             161..1207
                     /gene="nuoH"
                     /locus_tag="VEV83_01665"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HYK43845.1"
                     /translation="MVNLMTIDWILLLEKFILIAIVILASLFVAMYETYAERKIAAFM
                     QDRRGPNRAGPFGILQPLADGVKLFFKEEIIPSSSNKVLFILGPSLAMLTAMMTCAVV
                     PWGGNLELFGRTISLQIADVNIGILYVFAVVSLGVYGIMIGGWSSNNKFSLLSALRGA
                     SQVISYELAMGISLIALLMLTGSLSMKTIVEQQMQTHWNILYQPLGFLIFFICALAEC
                     NRTPFDLPEAENELNMGYHQEYSSMKLGFYLFAEYVNMFISSAIMATLFFGGYDVPFF
                     NESSLAPNLAAIIGVVAFMVKIGIFIFLFIWIRWTIPRFRYDQLMNLGWKKLIPLALA
                     NMLITGAVILWLNK"
BASE COUNT          415 a          303 c          372 g          437 t
ORIGIN      
        1 agccgcctga atttttggaa gatatcatgc atggaactca cccgcgatac atgctggaca
       61 ttcacaatgt aagcgaagtg aatgcggcgg aggtgaggtt ggatttgatt gaggggcccg
      121 ctcacaccga ggattttgaa agataataaa gaggcgtcga atggttaatt taatgacaat
      181 agactggatc cttttattag aaaaatttat tctcattgca attgtgatcc tggcatcgct
      241 tttcgtggca atgtatgaga cctatgcaga acgaaagatc gccgcgttta tgcaggacag
      301 gcgcgggcct aatcgcgccg ggccatttgg aattttacag ccattggcag acggtgtcaa
      361 attatttttc aaggaggaaa ttattccgag cagctcgaat aaggtgttat ttattcttgg
      421 tccgtcactc gcgatgctaa cagcgatgat gacgtgtgcg gttgttccgt ggggtggaaa
      481 ccttgaactt tttggccgga ccatttcttt gcagatcgct gatgtcaata tcggcatctt
      541 atacgttttt gcagttgtta gcctgggagt atatgggatc atgatcggcg gatggtcatc
      601 aaacaataaa ttttctttac tgtctgccct tcgcggcgca agccaggtga taagctatga
      661 actggcgatg ggcatttcgc tgatcgcctt gctgatgctg accggttctt taagcatgaa
      721 gacgatagtg gaacaacaaa tgcaaacgca ttggaatatt ctctatcaac cgctcggttt
      781 tttgatcttc ttcatttgcg cgttggctga atgtaaccgc acgccgttcg atctgccaga
      841 ggccgagaac gaattgaaca tgggctatca ccaggaatat tcttcgatga agttgggctt
      901 ttacttattt gcagagtatg tgaatatgtt tatcagcagt gcgatcatgg caacactttt
      961 ctttggaggc tacgatgtgc ctttctttaa tgaaagcagc ctcgcgccga acctcgctgc
     1021 cattatcggt gtggttgcat tcatggtcaa gatcggaatt tttatcttcc tgtttatctg
     1081 gatccggtgg accatcccgc gtttccgtta cgaccaactg atgaacttag gatggaaaaa
     1141 gctgatcccg ctggcgctgg cgaacatgtt gataacgggg gcagtaattt tgtggctgaa
     1201 taaataaatt aaaaacgcgt tgcgtgctgt taagaatcaa agaagataga agacggaaag
     1261 tggccatact ttgtgaaact tagcgccttg gtgacttggt ggtttctgtt ctcttttgaa
     1321 ccacgaagac tcgaagacac aaaaacacac taagaaaatg agccgcacac tatgaaaaat
     1381 caatagcacg tcaaattaaa agtcaaatta aaaagacgga agaaagcgaa tgttattttg
     1441 acttgttact ttttactttt gaattttcta aatgataaca ttaacaaaca ggagtgcacc
     1501 agtcgaccgg aaaccaatga cgttcct
//
LOCUS       DASQJI010000051         3961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1999965,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000051 DASQJI010000000
VERSION     DASQJI010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1999965"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..2714
                     /locus_tag="VEV83_01670"
     CDS             267..2714
                     /locus_tag="VEV83_01670"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK43846.1"
                     /translation="MFKNYFIVAFRNFWRNKIFSLINITGLAIGISASLVIFLLVEYD
                     FSFDKFEKDGDRIYRVVSDFTFSGESFKNSGVPSPMPAAVKTDITGLDVVAPFRTWNN
                     NAKITIPQSKGDPTIFKKQNSIVFADENYFKLLEYTWLAGSARSSLKQPYQVVLTESN
                     AKLFFPKLTASQVVGQEIIFNDTVMTTVTGVVKDIEQNTDFTFKTFISRATLESTSLK
                     PDDWDQWESTTSDSQLFLKLSEGTAPSKMQEQIMKLFKKYDKPNPENHGTTSYALQPL
                     NDVHFNADYDNFDQRLAHKPTLYALLAVAAFLLLLACINFVNLTTAQASQRAKEIGIR
                     KTMGSSKKQLMLQFLSETFLLTLISTVISLFITPLLFKVFADFIPKDLHFSFTSQPEI
                     FIFLALLVVTVTLMSGFYPAIVLSSFQPVLVLKNQVVSGGSSRRAWLRKSLTVSQFVI
                     AQVFIIGTILVSKQISYSLNRDMGFKKDAIINFTTNFYDTVASHRAVLMDKLRAIPEI
                     AMVSLGNSAPSSNSTWSSTMKYKDGKKETESDVQVKLGDTNYVKLYQMKLVAGTNLPQ
                     QDTIHSVIINETYAHVLGFQQPQQAIGKHIDWDGKQDPIVGVVADFHQHSFHDPIKPL
                     VITTHTSQMRNFSVLLQPQNEAGTTWKTAISKIEKVFKQVYPEDDFEYTFFDESIAKY
                     YTAEQNMSRLLMWATGLAIFISCLGLLGLAIYITNQRTKEIGIRKVVGATVTQIVSLL
                     SRDFLRLIGLAFIIAIPIAWYGANIWLQNFAYRTQVSWWIFLAGGAIMFAIALMILCI
                     RTFKAANANPVRALRSE"
     gene            2801..>3961
                     /locus_tag="VEV83_01675"
     CDS             2801..>3961
                     /locus_tag="VEV83_01675"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK43847.1"
                     /translation="MFKNYFIIAWRNLLRNKIFSLIKILGLSIGLTVCMLIFLYTKDE
                     ISYDQFQENKGHLFRITQDWNMGADQNQTIGVTNGIMGETFGKEIPEVQQFVRVNGVA
                     VTVKKNNDVFTENPLFVDDNFLSVFTLPLIDGRKRTALHDPHSIILSKDMAKKYFGTT
                     DVVGDVMQIKIDTAFENFTVTAVAENSPQNSTIKAGMLMPYSFYKNYNSNTNWIGGSL
                     NTFLLLADNANVQTVEQKMQALFDKHTSDKIAQAEKEQGISINIRLHLQPITDIHLST
                     KTGPDNGLSDGSSPTYSYILSSIAIFILIIACINFINLAVAQSLKRSKEIGVRKVVGS
                     TRTQLIKQFLVESFVVSLIAFVIAIALTQLVLPFFNELANKKLSLSYLSDGYL"
BASE COUNT         1159 a          825 c          899 g         1078 t
ORIGIN      
        1 tatgcgtaca ggatcgatat aacgtggtgg atgtttgtga tagcagggat agtttcaatt
       61 ttgatcgcgc tgataacggt gagtttccag gcgatcaaac tagccatggc gaatcctgtg
      121 agaagtttga gaacggaatg atgggatgag taatcagtaa tgagtaatga gtaatgagtt
      181 tgtaggtgag atcgtaataa gaattgtggg gaatggtgag tgaaatatgc gatctaaaat
      241 cgtaaatctg aaatcgtaaa tcgtaaatgt tcaaaaacta tttcatcgtc gcttttagga
      301 acttttggcg gaataagatc ttttcgctga tcaatattac agggctcgca atcggcatca
      361 gcgcttcgct ggttattttc ctgctggttg aatacgattt tagttttgat aaattcgaaa
      421 aagacggtga tcgcatttat cgcgtcgtgt cagactttac tttcagtggg gagagtttta
      481 agaactcggg tgttccttca ccgatgcctg ccgcagtgaa gaccgacatt accgggctgg
      541 atgtggtcgc gccgtttcgc acctggaata acaacgcaaa gatcacgata ccacaatcga
      601 aaggagatcc cacgatattt aaaaaacaaa acagtattgt ttttgccgat gaaaattatt
      661 ttaagctgct tgaatacacc tggctggcgg gctccgcacg atcctcattg aaacaaccct
      721 accaggtagt gctcaccgaa tcaaacgcca aactattctt tcctaaattg accgcgtcgc
      781 aggttgtcgg tcaagagatc atttttaatg acacggtgat gactactgtt acaggcgtag
      841 taaaagatat tgagcaaaac accgatttca cttttaaaac tttcatctca agagccacgc
      901 tagaaagcac aagtttgaaa cctgatgatt gggatcagtg ggaaagcaca acgtccgact
      961 cacaattgtt tctgaaattg tcggaaggca cagctccgtc gaaaatgcag gagcagatca
     1021 tgaagctctt taaaaaatat gacaaaccca atcctgagaa ccacggcaca acatcatatg
     1081 cactccagcc attgaacgat gtacatttca acgcggacta cgacaacttc gatcagcgtc
     1141 tcgcgcacaa accaaccttg tatgcacttc tggctgttgc agcatttttg ttgctgcttg
     1201 cgtgcatcaa ctttgtcaat cttaccacgg cacaggcatc gcaacgggca aaggagatcg
     1261 gcattcgtaa aacgatgggc agctcgaaga aacagctcat gcttcaattc ttaagtgaga
     1321 cttttctttt gacgcttatc tcaactgtga tatcgttatt cataacaccg ctgctgttta
     1381 aagtgttcgc agatttcatt ccaaaagatc tgcacttcag tttcacatcg cagccggaga
     1441 tctttatttt tctcgcgttg ctcgtggtaa cggttacatt gatgtcaggc ttttacccgg
     1501 cgatcgttct ttcctcattt cagcctgttc ttgttttaaa gaaccaggtg gtttcaggtg
     1561 gaagttcacg cagagcctgg ctaagaaaat cgctcactgt ttcgcaattt gtgatcgccc
     1621 aggtatttat tatcggaaca atactcgtta gcaagcagat cagctattct ctcaacagag
     1681 acatgggctt taagaaagat gcgatcatca atttcaccac gaatttttat gacaccgttg
     1741 ccagccatcg tgcggtgctc atggacaagt tgagagcgat tcctgaaata gcgatggtga
     1801 gccttggcaa cagtgctcct tcttcaaaca gtacatggag cagcacgatg aaatataagg
     1861 atggaaagaa agaaacggag tctgatgtac aggtgaaatt gggagatacc aattatgtga
     1921 aattgtacca gatgaaattg gttgccggta ccaaccttcc gcaacaggac accattcaca
     1981 gtgtgatcat taatgaaaca tatgcgcatg ttctcggttt tcagcaacca caacaggcaa
     2041 taggaaaaca tattgactgg gatggcaaac aggatccgat cgttggcgtt gtcgctgact
     2101 tccaccagca ttcattccac gatccgatca agcccctcgt gataacgacg cacacctcgc
     2161 agatgcggaa ttttagtgtc ttgctgcaac cgcaaaacga agcgggcact acatggaaga
     2221 cagcgatcag caaaattgag aaagtgttca agcaggttta tccagaagac gatttcgagt
     2281 acacgttttt tgatgaaagc attgcaaaat actacactgc cgagcagaac atgtcccggc
     2341 tactcatgtg ggctacaggc ctcgcaatct tcataagctg tctcggtttg ctcggtctcg
     2401 cgatctacat aaccaatcaa cgaacaaaag aaatcggtat aagaaaagtt gtgggcgcga
     2461 cagtgacgca gatcgtttca ttgttatcaa gagatttttt aaggctgata ggtcttgcat
     2521 tcattatcgc aattcctatt gcatggtacg gagcaaacat ctggttgcaa aatttcgctt
     2581 accgcacgca ggtaagctgg tggatatttt tggctggagg cgcgatcatg tttgccatcg
     2641 cgttgatgat attatgtatc aggactttta aggcggcgaa cgcgaacccg gtcagggcat
     2701 taaggagtga atgatgaaat gagtaatgag taatgagtga tgagtaggtg aattgtgaat
     2761 tgtcaatctg caatcgccaa tctgaatctg aaatcgtaag atgttcaaaa attatttcat
     2821 aatcgcctgg agaaatttgt tgcggaacaa gatattctct ttgataaaaa tactcggctt
     2881 gagcatcggc cttacggttt gcatgcttat ctttttgtac acgaaggacg aaattagtta
     2941 tgaccagttc caggaaaaca aagggcatct gtttcgtatt acacaagact ggaatatggg
     3001 cgctgaccag aaccaaacga tcggcgtcac gaatggcata atgggcgaaa cttttggaaa
     3061 ggaaattcca gaggtccaac agttcgtccg ggtaaacggc gttgctgtaa cggtaaaaaa
     3121 gaataatgac gtctttacgg aaaatccttt gttcgtggat gataattttt tatcggtctt
     3181 tacgcttcca ttgattgacg gaaggaaacg aactgcatta catgatccgc attccattat
     3241 cctttcaaag gatatggcga aaaaatactt tggaacaaca gatgttgtcg gcgatgtgat
     3301 gcagataaag atcgataccg cttttgaaaa tttcacagta acggccgttg ctgaaaattc
     3361 accgcaaaac tcaacgatca aggcgggcat gttgatgccg tactcgttct acaaaaatta
     3421 taatagtaat acaaattgga taggcggaag cctgaacaca tttttactgc tcgccgataa
     3481 tgcaaatgtg caaacggtcg agcagaagat gcaggctttg tttgataagc atacgagcga
     3541 caaaattgcg caagctgaaa aagagcaggg catctcgata aacatcaggt tgcacctgca
     3601 acccataaca gatattcacc tgagtacgaa gactggcccc gacaacggtt taagcgatgg
     3661 cagcagcccc acctattctt atatcctttc ttctatcgcc atctttattc taattatcgc
     3721 gtgtatcaat tttatcaacc tcgcagttgc acaatcttta aaacgcagta aagagatcgg
     3781 cgtaagaaaa gttgttggca gtacccggac ccaactgata aagcaattcc ttgtagaatc
     3841 gttcgttgtc tcgttgatag cctttgtcat tgcaattgcc ttgacgcagt tggttctgcc
     3901 gttctttaat gaactggcca ataaaaaatt gagcctgtct tatttgtctg acggatattt
     3961 a
//
LOCUS       DASQJI010000052         8289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2307393,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000052 DASQJI010000000
VERSION     DASQJI010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8289
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307393"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..916
                     /locus_tag="VEV83_01680"
     CDS             <1..916
                     /locus_tag="VEV83_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK43848.1"
                     /translation="TIAPGDFDNDGDIDYIVGNTGLNSFYRASEKYPVSVYGKDFNND
                     GSYDAVTSLYLPDKNHNATVKEFPAASRDELIRQMISMRRRYENYVSYANSTMDSVIP
                     ADQRQDAVIKHANNFASCYVRNDGSGKFSLQRLPVNAQLSTLCGIAVSDFDGDGNLDV
                     VINGNDYGTEVGTGRYDALNGLMMKGDGSGGFTALTIMQSGIFIPGNGKSLVQLRSSD
                     KSYLLAAAENRGPLRIFKLKRDVNMLPAEAGEVGAIVFLKNGKKRKQEIYYGASYLSQ
                     SSRFVAIDGNVKSVQFYNSTGATRTINF"
     gene            926..2452
                     /locus_tag="VEV83_01685"
     CDS             926..2452
                     /locus_tag="VEV83_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK43849.1"
                     /translation="MHKRPVSFFLASSLVIFFTSCHDYEKNSSHGSTPDASIREGKTL
                     AAKYCASCHLLPDPSLLDSKSWENGVLPQMGPRLGIFYYGSRQYPSYVNDLNVGKNFY
                     PAEPVISFDDWQHLIDYYAATSPDSLLPKSSPARIDYSSTMFQPQSPALRLNAPATSF
                     IKITSQQIVVCDVVAKKLFRFNGSLNLIDSCDTRTAVTDVIIDSNQYTLCNTGVLNPN
                     NGKFGLVGLINLAEQVSDTIIDKLMRPVQVSRADLDHDGKDDYLVCEFGNLSGALSWL
                     QNTDTGYVRHVIRPFPGAIKTYIDDYNHDGLPDIWALFAQGEESVFLFTNKGNGQLQQ
                     KEILRFPPSYGSSSFELDDFNKDGFPDIVYTCGDNADYSVILKPYHGVYIFINDGKNN
                     FTQKYFFPINGCYKAIARDFDNDGDLDIATIAFFPDYVRRPEEGFVYLKNEGNFQFKP
                     YTVNAAKNGRWLTMDAGDVDGDGKIDLVLGNFAVAPAMIRSTVDWKKQPQFLLLRNIQ
                     "
     gene            complement(2453..3166)
                     /locus_tag="VEV83_01690"
     CDS             complement(2453..3166)
                     /locus_tag="VEV83_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HYK43850.1"
                     /translation="MKQATVYLIPIALHDDITALRALPAYIIDAVKNCSIFFVENERT
                     ARRFLKKVFREIVIDSYEWHTIGDEQTLIEKMFRNALSNGSTIGIMSEAGCPGIADPG
                     QRLVQIAQQMNARLCPLVGPNSVVLALMASGMNGQCFQFVGYLPVDTHERKKKIGELE
                     NDSAKRNCTKIFIETPYRNNQLLNDILLTARPNTYLCIASDLTAVSESVKTKKISEWK
                     KTTPDLHKHPTIFLLYAGL"
     gene            complement(3163..3939)
                     /locus_tag="VEV83_01695"
     CDS             complement(3163..3939)
                     /locus_tag="VEV83_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HYK43851.1"
                     /translation="MLKEIIIAVQGYYKAHHFIQQHRLWKWIIIPGVMYTLLFIISMY
                     FFGKTANNFIEWLTLKTGLKVWLDKTGSGLLGFLFAFAGVMLWLIQMLFYFSLFKYIW
                     LIVGSPVFAYLSERTDSIIENKEFNFDGKQFLKDVIRGIRIAMRNCLWQSVYMISIVL
                     LSLIPVLGWLTPLLALLVECYYYGFSMLDYSFERKKMTAAESIYFIGNHKGLAIGNGL
                     IFYLMQLLPLLGWVLAPAYAVVAATLSLHDIRESIPVKAE"
     gene            3976..4638
                     /locus_tag="VEV83_01700"
     CDS             3976..4638
                     /locus_tag="VEV83_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HYK43852.1"
                     /translation="MILSKLTLKERQLLASLQTLSASFYTRHDVVQIAKDLLGKVIVT
                     YFDDQLTVARIVETEAYQGITDKASHAHNNRRTRRTEIMYAAGGAAYVYLCYGIHHLF
                     NVVTNVQDVPHAVLIRAAEPLAGIQIMLQRTGKKIADHTLTRGPGNVSKALGIYTHHT
                     GTDLKSENFFIAKDSLRLKPHRIVESTRIGVAYAAEDALLPYRFFIKDNPYVSGTKGS
                     RN"
     gene            4695..5747
                     /locus_tag="VEV83_01705"
     CDS             4695..5747
                     /locus_tag="VEV83_01705"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HYK43853.1"
                     /translation="MLYPVLRSVLFALPPENVHHLSMNCLKLACSIQPSKRLIQKNFQ
                     YSADALTKEVFGLKFKNPVGLGAGFDKNAIYLKELEALGFGFVEIGTVTPIPQKGNEK
                     PRLFRLPKDEALINRMGFNNDGVYEVRKRVEEWRTSNVKRQTDFIIGGNIGKNKITAN
                     EDAWKDYETCFRELFDSVDYFVVNVSSPNTPGLRELQEKKSLKKILSHLQTINHSNVN
                     PKPLLLKIAPDLNVAQLDDIIQLASEVQLDGIVATNTTVEREHLLTPKEMLDEIGAGG
                     LSGKPLRKKSTEIVQYLSKSLDSKISIVASGGVFSGSDAKEKLDAGAALVQVWTGFIY
                     EGPAIVKRINRFLVTR"
     gene            complement(5762..6475)
                     /locus_tag="VEV83_01710"
     CDS             complement(5762..6475)
                     /locus_tag="VEV83_01710"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HYK43854.1"
                     /translation="MNRFEILFEDDHFVAISKPSGLLSIPDREGKEISLKNILQQKRG
                     EIFTVHRLDRLTSGVIVFAKDAESHRNLCQLFEERQTEKIYFGIVHGSVSPISGTIEA
                     PIMAHPSGNSKMIIHAKGKPSLTEYEVVETFKLFSWVKFRIHTGRTHQVRVHAQHIGH
                     SIVCDDLYGSPEPLYLSGLKRNYHLSKKEDAERPILSRVALHAASLAFTLNKTEYFFE
                     SPLPKDLKAVLQQLRKLNA"
     gene            complement(6462..7544)
                     /locus_tag="VEV83_01715"
     CDS             complement(6462..7544)
                     /locus_tag="VEV83_01715"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HYK43855.1"
                     /translation="MKQHAFDKFVNKEKGAKKKEAIRQEKRKWKQEKRNKYDEAQTRE
                     KAARKKPVDRMLVSSSRTDPRLETSNRNFKTEHKKQADKIPDPKSRRQAGEVRHQASG
                     IRHQRSSEMPLNKFISHAGICSRREAAELVKEGKVKVNNEVISEPGFKVTENDKISVN
                     QRQVHLRKNLVYILLNKPKDYITTVKDPQGRKTIFQLIKNAADERIFPVGRLDRNTTG
                     VLLLTNDGELTQKLTHPSFGVKKIYEVRLDRPLEKRDMEKILQGITLEDGPIVADAIG
                     YADMKDKAIIGIEIHSGRNRIVRRMFEHLGYDVKNLDRVLFANLTKKNVERGKWRYLT
                     EKEIRLLKYMNQSFIKRSRAGKNESI"
     gene            complement(7726..>8289)
                     /locus_tag="VEV83_01720"
     CDS             complement(7726..>8289)
                     /locus_tag="VEV83_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK43856.1"
                     /translation="NGVWVAKYAWLSNLITIAILAGFSSVILVMLLGQSRVFFTMSRD
                     GLVPKAFSDVHPKYRTPYKSNWIFFVLCALFAGFIPADVVGEMTSIGTLFAFILVCAG
                     VWIMRVKNPELQRQFKTPMVPVTATIGIVVCGAMIFGLGWTNWARLVVWLIIGLIIYF
                     GYSRKHSKLQHGEVVEPKDPVDPLNRK"
BASE COUNT         2311 a         1800 c         1797 g         2381 t
ORIGIN      
        1 caccatcgca ccgggagatt tcgataacga cggcgacatc gattacatag tcggcaatac
       61 cggtttgaac tcattttaca gggcaagtga aaaatacccg gtgtctgttt acggcaaaga
      121 ctttaataat gacggaagct acgatgctgt tacttctctt tatcttcccg ataaaaacca
      181 taatgctact gtcaaagaat ttccagcagc ctcacgcgac gagctaatac gccagatgat
      241 cagcatgcgc aggcgatatg agaactatgt gtcgtatgca aattcgacga tggactcagt
      301 tattccggca gatcagcggc aggatgctgt tataaaacac gcaaacaatt ttgcatcctg
      361 ttatgtaaga aatgatggca gtggaaaatt tagcttacaa agattgccgg tgaatgcaca
      421 actttccacg ctgtgcggga tagcggtatc agatttcgac ggcgatggaa atctcgatgt
      481 cgtgatcaat ggcaacgact acggaacaga agttggtacc gggagatatg atgcattgaa
      541 cggactcatg atgaagggag atggaagcgg cggctttacg gcgcttacca taatgcaaag
      601 cggcattttc ataccgggca atggaaagtc gctggtgcaa ttgcgaagca gcgataaaag
      661 ctacctactt gccgccgctg aaaatcgcgg acccctgcgc attttcaaat tgaaaagaga
      721 tgtcaacatg ttgcctgcgg aggcaggtga agtaggcgcg atcgtatttc ttaagaatgg
      781 gaagaaacgc aaacaggaaa tttactatgg tgcttcctac ttgtcgcaat catcgcgatt
      841 tgtggctata gacggaaatg tgaagtcggt acagttctat aattcaacag gggccacccg
      901 tacgatcaat ttctaaaatc attcgatgca taaaagacct gtgtcttttt tcctcgcttc
      961 ttcgctggta atttttttca cgtcgtgcca cgattatgag aagaacagct ctcatgggtc
     1021 aacgccggat gcaagcatca gggaaggcaa gacacttgca gcgaagtact gcgcatcgtg
     1081 tcatcttttg ccagacccgt cattattaga ttcaaaaagt tgggaaaatg gagtccttcc
     1141 gcaaatgggt ccacggcttg gtatttttta ctacggctcg aggcaatacc catcttatgt
     1201 aaatgatcta aatgtgggga agaattttta tcctgccgag ccggtaatat ctttcgacga
     1261 ttggcagcat cttatcgatt actatgcggc cacttcacct gattcgcttt tgccgaagtc
     1321 atcacctgct cgtatcgatt atagttcaac aatgtttcaa ccccaatcgc cggcattgcg
     1381 tttgaatgca cctgctactt catttataaa gatcacgagt cagcagatcg ttgtttgcga
     1441 tgtagtagca aaaaagttgt ttcgttttaa tggttcactt aatttaattg attcctgcga
     1501 cacgcgaacg gcggtgacag atgttatcat cgactcgaat caatatactt tatgcaacac
     1561 gggtgttctc aatccaaaca atgggaagtt tggtttagtt ggattaatca atcttgctga
     1621 gcaggtttcc gatactataa tcgacaaact aatgaggccg gtgcaagtgt cccgcgcaga
     1681 cctggatcac gacggcaaag atgactacct cgtgtgtgaa tttggaaatt tgtcaggggc
     1741 tttatcatgg ttacaaaaca cagataccgg ctatgtgcgg cacgtgatac ggccatttcc
     1801 cggcgcgatt aaaacttata ttgacgacta caaccatgac ggcttgccgg atatttgggc
     1861 gcttttcgcg caaggggaag aaagtgtatt cctcttcaca aataaaggaa atgggcaatt
     1921 gcagcagaag gagatcctgc gatttcctcc ttcatatggg tcttcttcgt tcgagctgga
     1981 tgacttcaat aaagacggtt tccctgatat tgtttatacc tgtggcgaca atgctgatta
     2041 ttcagtgatc ttaaaaccat atcacggcgt gtatattttt atcaacgacg gcaaaaacaa
     2101 tttcactcag aaatatttct ttcccattaa cggttgttat aaagcgatcg cccgcgattt
     2161 tgataatgac ggcgatctgg atattgctac aattgctttt ttccccgatt atgtacgtcg
     2221 gcctgaagag ggatttgttt atctgaaaaa tgaaggcaac tttcaattta aaccatatac
     2281 tgtaaatgct gcgaagaacg gcaggtggct taccatggat gcaggggacg tagacggcga
     2341 tgggaagatc gacctcgtgc tcggcaactt tgccgtcgcg cctgctatga tcaggtcaac
     2401 cgttgattgg aaaaagcaac cgcaattttt actgttgaga aatattcaat gatcataggc
     2461 cggcataaag taaaaatatc gttgggtgtt tgtgcagatc cggtgtcgtc tttttccatt
     2521 cgctgatctt ttttgttttg acagactcgg atacagcggt aagatcagaa gcaatgcata
     2581 aatatgtatt tggcctggcc gtaagcaaaa tatcgttcaa caactggtta ttcctgtaag
     2641 gcgtttcaat aaagattttc gtgcagtttc tttttgccga atcattttca agttcaccga
     2701 tcttcttttt tcgttcatgc gtatcaaccg gaaggtaacc gacgaactga aaacattgcc
     2761 cgttcattcc gctggccatt agcgcaagaa cgactgaatt cggaccaacc aacgggcaca
     2821 aacgtgcgtt catttgttga gcaatttgca ccaatctttg acctggatct gcaatacccg
     2881 ggcatccagc ctcactcatg ataccgatcg tacttccatt tgataacgca ttcctgaaca
     2941 ttttttctat cagtgtttgt tcatcgccga tcgtatgcca ttcatagctg tcaataacaa
     3001 tctcccgaaa tactttcttc aaaaatcgcc tcgctgttct ttcattttcc acaaaaaaaa
     3061 ttgaacaatt ttttacggca tcaataatgt aagcgggcag tgcgcgcaac gctgtgatgt
     3121 catcatgcaa agcaatagga ataagataga cggttgcctg tttcattcgg ctttcacggg
     3181 aattgattct ctaatgtcat gtaaactcaa agtggctgca acaaccgcat aagccggagc
     3241 cagtacccaa cccagcagcg gcaataactg catgaggtag aagatgaggc cgttgccaat
     3301 tgcaagacct ttgtggttcc caataaaata aatgctttcc gcagcagtca tcttttttcg
     3361 ttcaaagctg taatcgagca tcgaaaatcc gtaataataa cattctacaa gcaaagcgag
     3421 aaggggcgtg agccagccta aaacaggaat tagggacagc aagacgatcg agatcatgta
     3481 aaccgattgc cacaggcaat ttctcattgc gatccggatc cctctaataa cgtctttaag
     3541 aaattgcttt ccatcgaaat taaattcttt gttttcaatg atcgaatcgg ttctttcgct
     3601 caggtaagca aatacaggag atccgacgat caaccagata tatttaaaaa gggaaaagta
     3661 gaagagcatt tgaataagcc acagcatcac gccggcgaaa gcaaataaaa atccgagcaa
     3721 accgctcccg gttttgtcta gccacacttt caaacccgtt tttaaagtaa gccattctat
     3781 gaagttattt gcagttttgc caaagaaata catggagata ataaatagta acgtatacat
     3841 tactcccgga ataattatcc atttccatag ccggtgctgt tgaataaaat gatgagcttt
     3901 gtaatagccc tgtactgcta tgataatttc tttcagcaac cgggattatt tttaagcgta
     3961 aattacttga attgaatgat tctgtccaag cttaccttga aggaacgaca gttgctcgcg
     4021 tctctccaaa ctttaagtgc atcattttac acgaggcacg atgtagtgca gatcgcaaaa
     4081 gatcttctag gtaaagtgat cgttacgtat tttgacgacc aacttacggt agcacgcata
     4141 gtagagaccg aagcttatca aggaatcacc gacaaagctt cgcatgcgca taataaccgg
     4201 cgcactcgtc ggacggaaat tatgtatgca gcaggaggag ctgcgtacgt ttacctatgc
     4261 tacggcatcc atcatttgtt taatgttgtt actaacgttc aggatgtgcc gcatgcagta
     4321 ctcattcgcg ccgcagaacc acttgccgga atacaaataa tgttacaacg cacaggcaaa
     4381 aaaattgctg accacacttt gacgcgcggg ccaggaaatg tttctaaagc gcttggaata
     4441 tatacacatc acacaggaac cgatttgaaa agtgaaaatt tttttattgc gaaagatagc
     4501 cttcgcctga aaccacatcg aatcgttgag tcaacgcgta ttggcgtagc atatgcagca
     4561 gaggacgcgc tattgccata ccggttcttt ataaaagaca atccttatgt aagcgggaca
     4621 aaaggaagta ggaattaggc gtttggaatt tgcgatttga gagttgattt ttcacgacag
     4681 cctatcttcg cgtcatgttg tatcctgtgc tgcgctcggt cctgttcgca cttccaccgg
     4741 aaaatgtgca tcatctttct atgaactgcc tgaagttggc gtgcagtatt caaccttcga
     4801 aaaggcttat tcaaaaaaat tttcagtatt cggccgacgc gttgacaaaa gaggtatttg
     4861 ggttgaaatt caaaaaccct gttggtcttg gtgcaggttt tgataagaat gcgatctatt
     4921 taaaagaact tgaagcgctc ggttttgggt ttgttgaaat tggaacagtg acgcccattc
     4981 ctcagaaagg aaatgagaaa cctcgcttat tccgcttgcc aaaagacgag gcactcataa
     5041 accgcatggg ctttaataat gatggcgttt atgaggtgcg taagcgagtg gaagaatggc
     5101 gaacgtcaaa cgtcaaacgt caaacagatt ttataatagg gggcaacatc ggtaagaaca
     5161 aaatcactgc aaatgaagat gcatggaaag actacgaaac gtgtttcagg gaattgtttg
     5221 attccgtaga ttattttgtc gttaatgtaa gttcgcctaa cacaccgggc cttcgggagt
     5281 tgcaggagaa gaaatcgctg aagaaaatat tatcacatct gcaaaccata aatcacagca
     5341 acgtgaatcc gaaacctttg ctgttgaaaa ttgcacctga ccttaatgtg gcccagctag
     5401 acgatataat tcagcttgcg tctgaagtac aactggatgg aatcgtcgcg accaacacaa
     5461 ccgttgaacg tgagcacctg ttaacgccaa aagaaatgct tgacgaaatt ggtgccggtg
     5521 gcttaagcgg taagccgctg aggaaaaaat cgactgaaat tgtgcaatac ttgtcaaaga
     5581 gtcttgacag taaaatttcg atcgtagcaa gtggtggcgt tttcagcggt agtgatgcga
     5641 aagaaaaact cgatgcgggc gctgcgcttg tgcaggtctg gaccggcttc atttatgagg
     5701 ggccggcaat cgtgaaaaga ataaacaggt tccttgttac acgataatta tcttcgcaat
     5761 tttacgcatt caattttctt aactgttgaa gaacggcttt cagatctttt ggcaatggcg
     5821 attcaaaaaa atattccgtt ttattcagtg tgaaagcaag cgatgctgca tgtaatgcaa
     5881 ctcttgaaag tattggcctt tccgcatctt cttttttgga aagatgataa ttgcgtttca
     5941 gtcctgaaag ataaagaggc tccggtgagc catacaaatc gtcgcaaaca atactatggc
     6001 cgatatgctg agcatgcacc cgtacctggt gtgttctgcc agtgtgtatc ctaaatttca
     6061 cccagctaaa taatttaaaa gtttcaacca cctcgtattc cgtcaacgat ggtttccctt
     6121 ttgcatgaat gatcatcttg ctattgccgg aagggtgtgc catgataggt gcctcaattg
     6181 ttccgctaat tggcgatacg ctgccatgca cgatgccgaa atatattttt tcggtctgtc
     6241 tttcttcgaa caattggcat aagttcctgt gactctccgc atctttcgca aacacgatca
     6301 caccgctcgt taatctatcg aggcgatgta ctgtaaatat ttcgccgcgt ttttgctgca
     6361 aaatattttt caatgaaatt tccttgccct ctctgtctgg tatgctcaat aatccggatg
     6421 gcttactgat ggcgacaaag tgatcgtctt caaaaaggat ttcaaatcga ttcatttttc
     6481 ccagcccggc ttctctttat aaaactttga ttcatgtatt tcagcaggcg tatttctttc
     6541 tcagtcaggt aacgccattt gccacgctcc acattttttt ttgtaaggtt cgcaaacaaa
     6601 acgcggtcaa gattttttac atcgtatccc aggtgttcaa acatccggcg gacaatccgg
     6661 tttcggccac tgtgtatctc aatcccaata atggctttat ccttcatatc ggcataaccg
     6721 atcgcatcgg caactatcgg cccgtcttca agtgtgatgc cctgcagaat cttttccata
     6781 tccctttttt caagaggcct gtcgaggcga acttcataaa tcttttttac tccaaaagaa
     6841 ggatgcgtaa gtttctgtgt gagttctccg tcatttgtaa gcaaaagaac gccggtggtg
     6901 ttgcggtcca gtctaccgac gggaaaaatt ctttcgtcgg ctgcattttt tattaattga
     6961 aatatggttt ttcggccttg cggatccttt accgttgtga tgtaatcttt cggcttattc
     7021 aacaaaatat agacaagatt ttttctcagg tgaacttgcc tctgattcac acttatctta
     7081 tcattttctg taaccttgaa acctggttcg ctgattacct cattatttac tttcactttc
     7141 ccttctttca ccagttcggc ggcttctctc cttgaacaaa taccggcgtg cgagatgaat
     7201 ttgttcaaag gcatttccga agatctctga tgcctgatgc ctgatgcctg atgtcgaacc
     7261 tcaccggcct gtcggcggga tttaggatcg ggaatcttat ctgcttgttt tttgtgttct
     7321 gttttgaagt ttcggtttga tgtttcaaga cgtggatctg tacgactcga actcactagc
     7381 atcctatcca ctggtttctt acgtgcggct ttttcgcgag tctgtgcctc gtcatattta
     7441 tttctttttt cttgcttcca ttttcttttt tcctgccgga tcgcttcctt ctttttcgca
     7501 cctttctcct tgttcacgaa tttgtcaaat gcatgttgct tcatcttgta aagttcaatg
     7561 tttttacaac atactttctt gcgggatttg cagaatatag tggctagtcg gactagttca
     7621 ttaggacact aaaggttgtt taataactag gagactactt atgctcttta aattcacatc
     7681 agggaaaggt agcggtaaaa acggcggctt gtaacttcaa tgattttatt tccgattaag
     7741 tggatctaca ggatcttttg gctcaactac ttctccatgc tgcagtttgc tgtgtttgcg
     7801 gctgtagccg aaataaatga tcagaccaat gataagccat acaaccaagc gtgcccagtt
     7861 tgtccagccc aaaccgaaga tcatagctcc acaaaccaca atgccaatag tagcggttac
     7921 aggaaccatt ggagttttaa actggcgctg aagctcaggg tttttcacac gcatgatcca
     7981 aacgccagcg cacacaagaa taaacgcaaa cagagttcct atactcgtca tttctcctac
     8041 cacatcggcg ggaataaatc ctgcgaacaa agcgcaaagc acaaaaaata tccagtttga
     8101 tttatacggt gttcgatact tgggatgcac gtcagaaaaa gcttttggta cgagaccatc
     8161 gcggctcata gtaaaaaata cgcgggactg ccctaacagc attactagta ttacggaaga
     8221 aaaaccggcg agaatggcta tagtaatcaa atttgaaagc cacgcatatt ttgcaaccca
     8281 aacaccatt
//
LOCUS       DASQJI010000053        17465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1386030,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000053 DASQJI010000000
VERSION     DASQJI010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17465
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386030"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..503
                     /locus_tag="VEV83_01725"
     CDS             36..503
                     /locus_tag="VEV83_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43857.1"
                     /translation="MKLNAVIFCLILLSCNEPTNNNLQTKIDSLQSVIDKSYRPGLGE
                     FMSNIQLHHAKLWFAGENKNWELADFEINEIKEAMQGIKDYCSDRPEVRSIGSINPAI
                     DSVSASIGKEDPVLFKNAFVQLTNSCNNCHKQTAHGFNVIQIPDTPPFSNQKF"
     gene            736..3798
                     /locus_tag="VEV83_01730"
     CDS             736..3798
                     /locus_tag="VEV83_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK43858.1"
                     /translation="MFRSVKYLLIFFCCISAQQLSAQQIIPQYNFQQLDVQNGLAQNI
                     VYHFLQDSKDYVWIGTHNGLTKYDGRNAVSFLHDAQKENSLASNFITRILEDTAHQIW
                     IGNEKGIDLFNRADESFTHFGVDRPNGEKDNTYCVPTGFVSPTEFWFIDPKTKSIRAF
                     NVKTKATQFVCDMDEVDGVTFVDSATNTIHFWSYQSIGTVHLVFKGRKLIQKQTFFSA
                     GDNRLSNQPHVVHALQQNDSTIWLSTNEGLICLNPLKNTFALYNKWNGETVNELRYAA
                     FSPDKVLWLGSGPSGVYTFDINRRKFIGNYRNNKLDPFSICSNNIVSVYFDRCGNLWC
                     GSYGNGASYTSVENNFFSKHMINKEESMNNVIGLAVDGDDNCWCLIEDENGFWVFDKT
                     FSTSRNIIPRTEDGTIFDGSINRLLVDGDEHIWCAGNKGLYLYNIRANKMRRINYDYL
                     SDTHFGSNVIKCLIKLHDGSVVFSTFAGLYRASRHNEDVVVKLYSRLNDIYDKSFSSL
                     FQDEEENLFVKGDDSLFILKTFLDGREPVETKAFLFAPDIHQYFSDPVQHFVYIATSD
                     GLYVLDKKNLTLQKEKFAGHVPFQSAGCVFEKNDRLWIFGEKGLYSFDKKTNSGRTFT
                     IEDGLPGNEFNVSIMGFADDGKCVAGTTRGLVSFYPDKLLQDLYPPRAQLDHIYINDT
                     VHDPNEIANETNQLHLTYRENTFAFEFSAVAFQHNRECTFEYKLDAFDKGWIKSGSAH
                     YTRYSKIPPGKYNFIVRVYDVNGVLSPFTKELKIEVAKAFWQTNLFTGGVFVLIILIG
                     WLMVKAYLAAKIRKQKVMFEKQQAVEQERTRIAMEMHDDLGSGLTAISYLAGSLSTES
                     SMATRERASKIANSAKTLVDAMNDIIWTMKSDNNSVKDVLAYIKKQAAEQLEAADLNF
                     TFAFPAQIPDIKLSSEQKRNVLLISKEIIHNVIKHANATEVVVTAEIDDRCLQVTITD
                     NGKGFDAGKPSQFGNGLKNMQRRAREMNAQLEIFNHAGTTVKLTLTFG"
     gene            3850..4464
                     /locus_tag="VEV83_01735"
     CDS             3850..4464
                     /locus_tag="VEV83_01735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK43859.1"
                     /translation="MITVCIVEDLEDIRNGLAAIINMTPEFTVLQTFSNAEDALDNLA
                     SLRPDIVVMDIHLPGMSGIECIRRLHERSRSIQFMMFTIYENSDTVFEALEAGASGYI
                     LKNSSPSKIVESLRELYQGGSPMNAEIAKKLVTRFQKQNENEYHLTPKEQQIIELMAK
                     GYLYKEIAFELKNTVNTIKQHIRHIYEKLHVQNKAEAINRMYLK"
     gene            4713..7745
                     /locus_tag="VEV83_01740"
     CDS             4713..7745
                     /locus_tag="VEV83_01740"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HYK43860.1"
                     /translation="MRKFTKHFTPVACLLITIVTTSIAPAINAQDILTGLTSNGGPEG
                     KGTAFSIKSNGTSFSIIKGFADWGRVPKGDLYRHTDGNFYGMTSAGGIYDDGTIFKMS
                     STGAITIIRNFDYTNDGAYPEGELIKGPDGNMWGMTSSGGSNTTGVIFKLTTAAVFTV
                     VHVFDYTPDGSSPHGHLVLGKDGNFYGITAAGGTYGYGTIFKMTPSGTYSVLRHLNGG
                     SDGGPSYGSITEGSDGNLYGMTYGGGTNNIGTIIKISKTGSGFTVLRNFTYATDGGYS
                     RGDLVQATDGFLYGMTAAGGVNGHGIIFKIKTTGGSFADLRDLTGTDGENPTGGLVQH
                     TDGFLYGLAYGGGAHGGGTFFKISTAGAFTPLYAFTPDTDGGYPDGGVIVSSDGNLYG
                     MTSDGGPNFLGTAFKVTTSGTFTLLASFNGATLGNTPYESLVRGNDSAFYGTTSNGGG
                     NRYYGAIFKICAGNTTLLHTFDGTTGGNPKGSLVQASNGIFYGTTEIGGTNNAGTIFK
                     ITKSGTYTVLKNLTGATDGEYPNGSLIQGTDGNLYGMNYSGGANSGGTIFKITLTGTL
                     TVLRHLSTADGYYPYGGLIQGTDGNFYGCTSTGGANGGGTIFKITSTGTFTVLRNLAS
                     GDGTNPYCSLVQHPNGNFYGTTTQGGNNGGGTIFRISSAGSFQVLKHLTTATNGGVPK
                     GSLFVGTDTSLYGMTSDGGSYDAGTIFKITTTGTYTVLRNLNLVTDGGTPYGSLIIFP
                     ANTLVANAQSLTTKEDTKKNITLTGSGASPLSFNIVTSPKHGTLTGTGAARVYKPAAN
                     YNGKDSFSFNVSFNCINSDPAKINITVTAVADTPVLAPIGNKTIKKDSTLTFTAKATD
                     GDKGDVLTFSLIGAPAGASINGSTGVFTWTPTSTGSFMFKVRVTDNSALLLYDEETIT
                     VTVTTLFAKNDRGAQMDATIYPNPVHDKLIVSLNTTVESLAATITDTRGFELARHEIQ
                     LNGVKSFEINVSELSPGTYFLRLKTKDEIKVFNFVKEE"
     gene            complement(7989..8963)
                     /locus_tag="VEV83_01745"
     CDS             complement(7989..8963)
                     /locus_tag="VEV83_01745"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK43861.1"
                     /translation="MRKFFKVLKWIGITLSVIIIVLVVVVAFRQNKTYDAPYPAIHAS
                     NDSAVIARGQYLAFGPAHCSGCHTPQSDESKIAAGEHLPLLGGRDFKIQIGTIRSHNI
                     TPDASGIGNFSDSEIARALRYGVTPGGAPIFDFMPFHNLSDEDLTAVISFMRAQQPVK
                     NDVKRMDLNPLGRAVYAFLIKPVGPVGEISKSVTRDTTAIYGSYLANSIANCRGCHTQ
                     RNMMTGAFIGAPFAGGLKFDHPESAMSLVTPNLTPDKETGRLYGWTEQMFINRFRQGR
                     LIKESDMPWDQFAQMSDNDLRAVYNFLMSINPVKQDNGPVMVKNQSKD"
     gene            complement(9164..9793)
                     /locus_tag="VEV83_01750"
     CDS             complement(9164..9793)
                     /locus_tag="VEV83_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43862.1"
                     /translation="MQQDYHCPLVPGNVYHLINRAVGNEKLFRTGDNYIYFLAKYAQH
                     TKSVCETYCYCLLPDHFHLLVKMKEKREIASFFETIKRKKLLPNNDAAMSDFLMERFS
                     NWLNAYAKAYNKVYDRKGALFLDYTKRLLIKQNGCFGGVIQYIHANAVHHRLVRAVSA
                     WQHSSYNSLLSAAPTLLLRDEVMALFGSKNKFISFHQQPFDRGLTQLLE"
     gene            complement(9959..11869)
                     /locus_tag="VEV83_01755"
     CDS             complement(9959..11869)
                     /locus_tag="VEV83_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK43863.1"
                     /translation="MKRFLITCLVCLPVISFSQSTMSPELLWHLGRLAPIGLSKDKQY
                     VLYSVSTPDISANKMNTKSYRIPVAGGVAEEINRTDTMMENIHVSPNGKWKISDSDVK
                     LMNVYGNDFYPALPKSNVQIYNSLMYRHWDTWEDGKFSHVFLNAVNDTVRKDLMAGEP
                     YDCPLKPFGNGADYIWNPDGKHVVYVTKKKSGTEYTLSTNTDLYEYDIESGATKNLTE
                     GMMGYDVSPSFNKKGDLAWLSMKRDGYEADKQDIVVSNGVSKINLTASRDDIHVEAFR
                     WSDDDKNIFFVAPKDGTLQLFQVNYPGATKIGPVVTQITKGDYDVAAIVGQSGNSLIV
                     TRTDMNHAAEIYSVDLDNGSMKKLTSVNDSTYNALALCKTERRYVTTTDNKQMLVWVI
                     FPPNFDPSKKYPTLLYCQGGPQSPLTQFYSFRWNFQLIASQGYIIVAPDRRGMPGFGT
                     QWNEQVSKDWGGQVLRDYLSAIDAVSKEKYVDTSRRGCVGASFGGFSSFALEATHNHR
                     FKTFIAHDGTFDFRSMYGTTDEMWFENWDKGGPYWDKSNAAAQRSFSQSPSNFVDKWD
                     APILIFQGGKDYRVPIEQGQQAFQAAQLRGIKSRFIYLPDENHWVLNAQDALVWQHEF
                     FQWLEETMPAKN"
     gene            complement(12127..12531)
                     /locus_tag="VEV83_01760"
     CDS             complement(12127..12531)
                     /locus_tag="VEV83_01760"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK43864.1"
                     /translation="MTLEHVAIWTNNLERLREYYSKYFAGVPNQKYINPEKKFESYFL
                     SFESGARLELMSMIDIPNNKNDTIEKQHLGIIHLAFGVASMKDVDLKAAQLKNDGFRI
                     LSGPRRTGDGYYEFETLDPDNNRLEVSTKFQE"
     gene            complement(12534..13766)
                     /locus_tag="VEV83_01765"
     CDS             complement(12534..13766)
                     /locus_tag="VEV83_01765"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045550 - geranylgeranyl reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranyl reductase family protein"
                     /protein_id="HYK43865.1"
                     /translation="MVETIETNICIVGAGPAGSVTSIVLSKMGIPHLIIDAAVFPRDK
                     ICGDGLDLKVVRVLNNIDPSIIKNEFSNEELFMPSMGMRFILPKGKYVDLMCAGNGNT
                     LFKQPVFYTSRRTSFDEFLLNKIDKNVADLRLGYTIEKITKQGEDWLLEGQAHSKQLR
                     IRCRMLVGADGDHSVVLKHVSDRAIDRKHYAAAIRQYWKNVQGIHPQKLIEIYFPEKY
                     PFAYFWIFPLNDHDANVGFGMASYHVAKENINVRKTLQEIIRSDPYISTRFKEAEPLE
                     EIRGWGIPMATLHRKAHGDGWLLTGDAASLVCPKSGEGIGPAMLSGYIAAHYIERAVK
                     KNSFAAEMFSGYDREMHRRSQDEERLYKFANAMPSWLFIKGVDTVLSSSIFKKWYAEK
                     EMKRWLITAYQKPITINF"
     gene            complement(13938..14657)
                     /locus_tag="VEV83_01770"
     CDS             complement(13938..14657)
                     /locus_tag="VEV83_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK43866.1"
                     /translation="MKISCAIIDDEPLARKGLTEYVHDVDFLHLEGVYEDALKAGTAM
                     TLHKIELIFLDIQMPRITGIDFLKTIAHPPLVILTTAYPQFALEGYELNVLDYLVKPI
                     SFPRFLKAVVKAKEQLELKHHEQPAQDLKDDYIFIKADNKLVKIFFKNILYVEALQNY
                     VCVHTADKKYITYLTFKSIEDNLPHDLFLKVHKSYIVQLARVDAVDGNELHLGQFRVP
                     ISRNNKEDVMQKLVANKFLKR"
     gene            complement(14665..15696)
                     /locus_tag="VEV83_01775"
     CDS             complement(14665..15696)
                     /locus_tag="VEV83_01775"
                     /inference="COORDINATES: protein motif:HMM:NF025854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK43867.1"
                     /translation="MPAKKTYKAIFYHLLFWVLFFAGWYFFRYQDFGSPALAARLTFL
                     KVLDLAILVYISNYLLVPKLLYEKKYLLFGLMYFLLVFSFSLFKMYLEGLIMHNPGMF
                     DLHTRFKARMYDNTIPHFLLVTSGVAFKLLLDYARAQKRIVEIATEKAEAELNFLKSQ
                     LNPHFLFNSLNSVYFLIDKKNTDARGALHTFSEMLRYQLYECDGQETTIEKEINFLKD
                     YIAVQRLRRNDNCELHFEVSDIDTSARIEPLLLVPFVENAFKHLSHFDNGQKDIINVS
                     LTSKNDHLVFKVENTMNTSNANELVRQGGIGLKNLKRRLELLYPEKHEFHTEEAGGWF
                     KACLDVKLN"
     gene            15862..16506
                     /locus_tag="VEV83_01780"
     CDS             15862..16506
                     /locus_tag="VEV83_01780"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43868.1"
                     /translation="MKNIVSLSACFCLIALAGCAQTPHKNSSDRRVGGSCEGCEAINS
                     SPVAFEKLLWIDTLPDFNEPGPKLIISGVIYKHDGKTPAPNVVLYVYHTDQTGHYTNK
                     YNEPGYAGRNGYIKGWMRTNEKGEYKFYTLLPGHYPGTTVPAHIHPIIKEPGMNEYYI
                     DEYLFNDDPVLTADERSKQEKRGGNGIISLEKKNGILYGRRDIILGLNVPDYPD"
     gene            16851..>17465
                     /locus_tag="VEV83_01785"
     CDS             16851..>17465
                     /locus_tag="VEV83_01785"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HYK43869.1"
                     /translation="MISIVEKLIKTFGSEAVLTAEEAAMRVASNWRQHENLRCLALLR
                     PKNTQQVSQMLKICNEFNQPVVPHGGLTNVVGGVVTNENEIALSLEQMNRVEEISVQN
                     KTVTVQAGVVLQQLQKIVSENGMLFPLDLGAKGSCMIGGNIASNAGGLHALRYGVARN
                     LVLGLEVVLADGTIISSMNKMMKNNAGYDLKQLFIGSEGTLGIIT"
BASE COUNT         4961 a         3929 c         3833 g         4742 t
ORIGIN      
        1 cgccagcatc ttataataaa atcgggtaac aaactatgaa attaaacgct gttatttttt
       61 gtttgatact tctcagttgc aatgagccta ctaacaacaa cctgcaaacg aaaatagata
      121 gcctgcagtc tgtgatcgat aaaagctaca gacccgggct tggagaattc atgagcaaca
      181 tccagctgca ccatgcaaaa ctgtggttcg cgggcgaaaa caaaaattgg gaacttgcag
      241 attttgagat aaacgagatc aaagaggcca tgcagggaat aaaagactac tgcagcgatc
      301 ggccggaagt gcgctcgatt gggtcgatca atcctgcgat cgacagcgtc agcgcttcca
      361 tcggcaaaga agatcctgtc ttgtttaaga atgcgtttgt tcaactcacc aattcgtgca
      421 acaattgtca taaacaaacg gctcacggtt tcaatgtcat tcagattccg gacacaccac
      481 cgttctctaa ccaaaagttc tagtaaaaca ggcgggcgct gcatatgaca ttaattagca
      541 tcggccttga ccgtcctcat tcaccgtaca tgtgtcttcg ttgaccttgc caagaagttg
      601 gttatgttaa ctttcccgag tgacctcggt cgccgccgtt aaaccaagtg tttctcgttt
      661 acagattatc ggcagggact gttgtcagaa ttattcttaa attgtacaag gtaaccatga
      721 ctgcagcgcc tgcttatgtt cagatccgta aaatacctgc tgatcttttt ttgttgcatc
      781 tcagcgcagc aattgtctgc gcagcagatc attccgcaat ataattttca acagctcgat
      841 gttcaaaacg gcctcgccca aaacatcgtt tatcattttt tgcaggacag caaagactac
      901 gtctggatcg gaacgcataa cggccttaca aaatatgatg gccgcaatgc cgtaagtttt
      961 ttgcacgatg cacaaaaaga aaattcgctt gccagcaatt ttataacgcg cattctggaa
     1021 gacacggcgc accaaatatg gatcggcaac gaaaagggca tcgacctgtt taaccgcgct
     1081 gacgagagtt tcacccattt tggagtcgac aggcccaacg gcgaaaagga caacacgtat
     1141 tgcgtaccga ccggatttgt ttcaccaaca gagttttggt tcatcgatcc aaaaacaaaa
     1201 tcgatcaggg ctttcaacgt aaaaaccaaa gccacgcaat ttgtttgcga catggatgaa
     1261 gttgatggcg tcacctttgt ggattcggcc acaaacacga tccacttttg gtcatatcaa
     1321 agcataggca cggtgcacct ggttttcaaa gggagaaaat taatacaaaa gcaaacgttc
     1381 ttttcagccg gcgataaccg tctttcaaat cagccacacg tagttcatgc attgcaacaa
     1441 aacgacagta caatttggct aagcacgaat gaaggtttga tttgtttgaa cccgctcaaa
     1501 aatacgttcg cgctttacaa caaatggaat ggcgaaacag tgaatgagtt gcgatatgct
     1561 gcattttcgc cggacaaggt tctatggctt ggcagcggac cttcgggggt ctacacattc
     1621 gacataaacc ggcgcaagtt tatcggcaat tacagaaata acaagctcga tcctttcagc
     1681 atctgcagta ataatattgt ttctgtatac tttgacagat gcggaaacct gtggtgcggc
     1741 agttatggta atggcgcgag ctatacgagc gtcgaaaata attttttcag caagcacatg
     1801 atcaataaag aggaaagcat gaacaatgtt attgggctgg ctgtagacgg tgatgacaat
     1861 tgctggtgcc ttattgaaga tgaaaatgga ttctgggttt ttgacaaaac attttcaaca
     1921 agccgaaata ttattccgcg tactgaagac gggacaatct ttgacggctc gatcaatcgt
     1981 ttattggttg acggagatga gcatatatgg tgtgccggca ataaaggatt gtatttgtac
     2041 aacatccggg caaacaaaat gaggcgcatc aattacgatt atttatcgga cacacatttc
     2101 ggaagtaatg ttataaaatg cctgatcaaa ttacacgatg gctccgtggt tttctccacg
     2161 ttcgcgggcc tttaccgcgc cagtcggcac aatgaggatg tggtagtgaa attgtacagt
     2221 cggcttaatg atatttacga taaaagcttt agttcgctgt tccaggatga agaagaaaat
     2281 ttatttgtaa aaggtgatga cagcttattt attttaaaaa cgttcttaga tggccgcgaa
     2341 cccgtggaaa caaaggcatt cttgtttgct cctgacattc atcaatattt cagcgatccg
     2401 gttcagcatt ttgtttacat cgccacaagc gacgggttat acgtgctcga taaaaagaat
     2461 ttgacacttc aaaaggaaaa gtttgccggg catgttcctt ttcaaagtgc gggctgcgta
     2521 tttgaaaaaa atgacaggtt atggatcttc ggtgaaaaag gcctctattc ctttgacaaa
     2581 aaaacaaaca gcggcaggac ctttacgata gaggacggtc tgccgggcaa tgaattcaac
     2641 gtgtcgataa tgggttttgc ggacgatgga aaatgtgtcg caggcactac tagaggattg
     2701 gtttcttttt acccggataa attactccag gacctttatc cgccccgcgc tcaacttgac
     2761 catatctaca tcaacgatac cgtgcacgat ccaaatgaga tcgctaacga aacaaaccag
     2821 cttcacctca cctaccggga aaatactttt gcctttgaat tttcagcagt cgcatttcag
     2881 cacaaccggg aatgcacttt cgaatataaa cttgatgcgt ttgataaagg ctggataaaa
     2941 agcggctctg cacattatac gcgctacagc aagattcctc ccggcaagta taattttatc
     3001 gtacgcgtct acgatgtgaa tggtgtgctt agtccgttta cgaaagaact taagatagaa
     3061 gttgcaaaag cattttggca gacaaacctt tttacgggcg gcgtgtttgt tttgatcatc
     3121 ttgatcggat ggcttatggt gaaagcctat ttggctgcga agatcaggaa gcaaaaagta
     3181 atgtttgaaa agcaacaggc agttgaacag gaacgaaccc gaatcgctat ggaaatgcac
     3241 gacgatcttg gctccggcct taccgcaatc agctacctgg ctggaagctt gtcaaccgaa
     3301 tcgtcgatgg ccacgcggga aagagcaagt aagatcgcaa attcagccaa aacactcgtt
     3361 gatgctatga atgatattat ctggacaatg aagtcggata ataattctgt gaaagatgtg
     3421 cttgcttaca ttaaaaaaca ggcagccgag caactggaag cggctgatct caatttcact
     3481 tttgcttttc ctgcccaaat acctgacata aaattgagca gcgaacagaa gaggaacgtg
     3541 ctgctcattt caaaagaaat tatacataat gttatcaaac acgcaaatgc caccgaagtg
     3601 gtggtaacag cggaaatcga tgatcgctgt ttacaggtaa cgatcaccga caacgggaag
     3661 ggttttgatg caggaaagcc aagccagttt ggcaacgggt tgaaaaatat gcagcgtcgt
     3721 gcacgggaaa tgaacgcgca attagaaatt ttcaatcatg ccggaaccac cgtaaaactg
     3781 actcttactt ttgggtgatg cgaaaacaat ggataaaaca atagttttga atttttctaa
     3841 aatcgcagga tgatcactgt ttgcattgta gaagacctcg aagacatcag gaatggactg
     3901 gctgccatca tcaacatgac cccggaattt acggtattgc agacattctc aaacgcggaa
     3961 gacgcattag acaatcttgc ctcattgcgg cccgatatcg tggtaatgga tattcacctt
     4021 ccgggaatga gcggcatcga atgtatccgc cgtcttcatg agcgaagcag gtccattcaa
     4081 ttcatgatgt tcaccattta tgagaacagt gatactgtct ttgaagcgtt ggaggccggc
     4141 gcgagcggtt atattctgaa gaattcctct ccttcaaaga ttgttgaatc actacgcgag
     4201 ctttaccagg gcggatctcc tatgaatgca gagatcgcta aaaaactcgt aacgcgtttt
     4261 caaaaacaaa acgaaaatga atatcaccta actccgaaag agcaacagat aatagagctc
     4321 atggctaaag gatatctcta taaagagatc gcttttgaat taaaaaatac tgtcaatacc
     4381 atcaagcaac atattcgcca catctatgaa aagctccacg tgcaaaacaa agccgaagca
     4441 atcaacagga tgtatctgaa gtaatggtga tggtcaatgg tgaatggtca attgtgaatg
     4501 gtcaattgtg aatcggcgca tatgcacgaa atccgaaatg tgcaattgtg cgtcgaatgg
     4561 tatatcccaa ttcctaattc ccaattccta attcctaatt cctaattccc aattcctaat
     4621 tcctcacccc tctccctttt gggcgattga cacgcttcaa ggcttcaatg aaatttgtgc
     4681 agtgattttt ttccaatacc aaaaacattt ttatgcgcaa gtttacaaag cattttacac
     4741 ctgttgcctg cttgttgatc acgatcgtga ctacctcgat agctccggca ataaacgccc
     4801 aggatatctt gaccgggttg acgtctaacg gagggccgga aggtaaagga acagcgtttt
     4861 cgatcaaatc taatggtacg agcttttcta ttattaaggg cttcgccgat tggggccgcg
     4921 tccccaaagg cgacctgtac cgtcacaccg atggaaattt ttatggcatg acctcggcgg
     4981 gtggcatata cgacgacgga actattttca aaatgagttc taccggcgca attacaatta
     5041 tcagaaattt tgactatacc aatgacggcg cttaccctga aggcgaattg ataaaagggc
     5101 ccgacgggaa tatgtggggc atgacgtcca gtggcggaag caataccacc ggagttattt
     5161 ttaagctgac aactgcagcc gtcttcacag tagtacatgt gtttgactat actcccgatg
     5221 gcagttcacc gcacggacac cttgtactcg gaaaggacgg aaatttttac gggatcaccg
     5281 cagcaggcgg cacgtatggg tacggaacaa ttttcaaaat gacgccttca ggaacttata
     5341 gtgtgctgcg gcacttgaac ggcggatcag atggtgggcc aagttatggc agcatcactg
     5401 agggctcaga tggcaatctt tacggaatga cttatggagg cgggaccaat aatatcggca
     5461 ccatcattaa aatatcaaaa accggaagcg gcttcacggt tctgcgcaac tttacatatg
     5521 ccaccgatgg tggttactca agaggcgacc ttgtacaagc tacagacgga tttttatatg
     5581 gtatgactgc tgcgggcgga gtgaatgggc atggcattat tttcaaaata aagacaacag
     5641 gcggatcctt cgctgacctt cgcgatttaa cgggaacaga cggagaaaac ccaacaggcg
     5701 gccttgtgca gcacaccgat ggttttctgt acggcctggc gtacggaggc ggagctcatg
     5761 gcggcggcac tttctttaag atctcaacag ccggtgcgtt cacacctttg tatgctttca
     5821 cccctgacac agacggaggt tatccagacg gaggcgtcat cgttagcagc gatggaaatc
     5881 tctacggtat gacaagcgac ggcggcccga attttcttgg cactgcattc aaagtcacta
     5941 catcaggcac ctttactttg ctcgccagtt ttaacggcgc gactctcgga aatacacctt
     6001 atgaaagtct tgtaagggga aatgacagcg cgttctatgg taccaccagt aatggcggag
     6061 ggaacaggta ctatggtgcg atcttcaaaa tttgtgcagg caacacaact ctattacaca
     6121 cttttgatgg aacaacaggc ggtaacccga aaggaagtct cgtgcaggca agcaatggaa
     6181 tattttatgg cactacagaa atcggtggaa ctaataacgc cggaactatc ttcaagataa
     6241 cgaagtctgg tacgtatacc gtgctaaaga atctcacggg tgcaacagac ggagagtacc
     6301 cgaacggaag ccttatccag ggcacagatg gaaatttgta tggaatgaat tattcgggcg
     6361 gagcgaacag cggcggaact attttcaaga tcacgctgac gggcacattg acggtgttgc
     6421 gtcacctttc gacagcggat ggctattatc catacggggg tctcatacag ggtactgatg
     6481 gcaactttta tggatgcacg agcaccggcg gcgccaatgg cggaggaaca attttcaaga
     6541 tcacatctac aggcacattt acagtactgc gtaaccttgc aagcggtgat ggcaccaatc
     6601 cttactgcag cctggtgcag catcccaatg gaaattttta cggcactact acccagggcg
     6661 gcaataatgg cggcggcacg atcttcagaa tatcgtctgc gggaagtttc caggtattaa
     6721 agcacctcac cacagcaaca aatggaggag tgccgaaggg aagtttattt gttggaaccg
     6781 acactagcct ttacggtatg acaagtgacg gcggttcgta tgatgcaggc acgatcttca
     6841 aaataactac gaccggaact tacacagttt tgcgcaatct taacctggtt accgatggag
     6901 gaacgccgta tggaagctta attattttcc cggctaacac acttgtcgca aatgctcaaa
     6961 gcctcacgac caaggaagac acgaagaaga atattacact aacgggctca ggcgcttcac
     7021 cgcttagttt caacattgtc accagtccga aacatggcac gctcacgggc accggcgcgg
     7081 cgcgagttta taaacctgcc gctaactaca atggcaaaga ttctttcagc tttaatgtaa
     7141 gtttcaactg cattaattcc gacccggcaa aaatcaatat cactgttaca gccgttgctg
     7201 acacacctgt gcttgctcct attggaaaca aaaccattaa aaaggattca acgctcactt
     7261 tcacagcaaa ggccacggat ggcgataaag gcgatgtact tactttctct ttgatcggcg
     7321 cgccggcagg cgcaagcatt aatgggtcaa cgggcgtgtt cacatggaca ccgacatcaa
     7381 ccggaagttt tatgttcaaa gtacgagtga ctgataacag cgctctccta ctgtatgacg
     7441 aagaaacaat tactgtaacg gtcaccacat tattcgcgaa aaatgatcga ggtgctcaaa
     7501 tggatgcgac gatctatcct aatccggttc acgacaagct aatcgtgtca ttaaatacaa
     7561 ccgttgaatc gctcgccgcg acgataaccg acacgcgcgg ttttgaactc gctcgccacg
     7621 aaattcagtt gaacggtgta aaaagttttg aaataaatgt cagtgaattg agtccgggaa
     7681 catactttct gcgactgaag acaaaggacg agatcaaggt tttcaatttt gtgaaagagg
     7741 aataaataat ttataaaagc ggtataaaaa aggaaggatg gcccgtggag atcgcgaatc
     7801 tctgcgggct ttttttgcgg ttgcaagcgc gatcgcaatg cacattaagg gcgtatttac
     7861 tcatgtccgt ccaaatgccc cattaaaaac aattcgcaac gcttgaaatt ttgaaaacga
     7921 tacaacttct taactttttt cgtcattgaa ttttgtcgaa ccgtaaatgc agtatcaaac
     7981 gatatgcctt agtctttcga ttgattcttc accatcaccg ggccattatc ctgcttcacc
     8041 ggatttattg acattaaaaa attatagaca gccctcaggt cattatcgga catctgcgcg
     8101 aattgatccc acggcatatc agattctttt attaacctgc cttgtcgaaa acgattgatg
     8161 aacatttgct ctgtccagcc atatagtctg ccggtttctt tatctggtgt aaggttcggc
     8221 gtcaccaaag acatcgcgct ttcgggatga tcgaatttca ggcctcccgc aaaaggcgca
     8281 ccaataaacg ccccggtcat catgttcctc tgtgtatgac atcccctaca attagcgatg
     8341 ctgttggcga gatagctgcc atatatagcg gttgtgtcgc gtgttactga ttttgaaatt
     8401 tcgccgacag gaccgacggg tttaatgagg aaagcgtaca cggcccttcc caatggattc
     8461 aggtccattc tttttacatc attcttcaca ggttgttgcg cacgcataaa ggatattaca
     8521 gcggtcagat cttcatcgct caagttatgg aatggcataa aatcaaagat cggtgcgcct
     8581 ccaggtgtta cgccatagcg aagtgcacgc gcgatttcgg aatctgagaa attcccaatt
     8641 cctgaagcat caggggtgat attatgtgac cggatggtgc cgatctggat tttaaaatcg
     8701 cggccgccaa gcaaaggaag atgttcgcca gccgcgatct ttgattcatc gctttgcggt
     8761 gtgtggcagc ctgaacagtg cgcagggccg aaagcaagat attgccctct tgcaatcacc
     8821 gcactgtcgt tactcgcatg aattgccgga taaggagcgt catatgtctt attttggcgg
     8881 aaagccacta caactacaag tacgataata ataacgctga gcgtgatgcc gatccattta
     8941 aggaccttga aaaactttct cattagacag ctgctttggt aatacttaat gttctgcagc
     9001 gctaagttgt gaaaaaatcg cattaatatc aaaaaggtca acagacgatt acaacttcgt
     9061 tattcgcatt tggtctgcgg ctttccgacg ggttattgtt tcacggagcg cttggtgaag
     9121 ctagatgtaa acctataagg ttttcgaaac cttataggtt tttttattca agcaactgtg
     9181 tcaggccgcg gtcaaaaggt tgttgatgaa aactgatgaa tttatttttg cttccaaata
     9241 gagccatcac ctcatctctt aatagtaagg taggtgcagc actgagcagg ctgttgtatg
     9301 acgagtgttg ccaggcgctc acagccctaa ccaatcgatg atgcacagca ttcgcatgga
     9361 tgtactgaat gactccgccg aaacaaccat tctgttttat gagcaaccgt tttgtataat
     9421 caaggaacaa agctcctttg cgatcgtaca ctttattgta tgctttcgca taggcgttaa
     9481 gccagttgct gaaacgctcc atcaggaaat cactcatagc agcgtcgtta tttggcaaaa
     9541 gttttttccg tttaattgtc tcaaaaaagg atgctatttc ccgtttctct ttcatcttta
     9601 ccaagaggtg aaaatgatca ggaagtaagc agtaacaata agtctcgcaa acgctctttg
     9661 tgtgttgtgc atattttgcg aggaaataaa tataattatc gcctgttcta aagagtttct
     9721 catttcctac agcgcgattg attagatgat aaacgttgcc gggcacaagc gggcaatgat
     9781 agtcttgttg cataaagggt tttttgggtt attgcaaacc tataaggttt ttggaaaacc
     9841 ctataggttt tttttcaact caccctaaca gaaatatacc tcggttgatc tttcgcaatt
     9901 tgagctggta cataaccgcc agcgaatcaa aaaaagtagt tatgcaacca ccacttgatc
     9961 agttcttcgc cggcattgtt tcttccagcc attggaaaaa ttcatgttgc cataccaatg
    10021 cgtcctgtgc attcaagacc caatgatttt cgtcgggcag atatatgaac ctgctcttaa
    10081 ttcctcttag ttgcgcagcc tggaatgcct gctgtccctg ctcaataggt acgcgataat
    10141 ctttaccacc ctgaaaaatt aaaataggtg cgtcccattt atcgacaaaa ttgctcggac
    10201 tttggctgaa tgaacgttgg gctgctgcat tgcttttatc ccaataaggg ccgcccttgt
    10261 cccagttctc aaaccacatt tcatccgttg ttccgtacat gctgcgaaaa tcgaatgtgc
    10321 cgtcatgcgc aataaatgtt ttgaaccggt gattgtgtgt tgcctccagc gcgaatgaac
    10381 taaatcctcc gaaactggct ccaacacatc cccttcgcga agtgtcaaca tatttttctt
    10441 ttgacacggc atcaatcgcg ctcaaataat cccgcaaaac ctgtccgccc cagtctttac
    10501 tcacctgctc gttccactgt gtgccgaacc cgggcatccc acgccggtca ggcgcaacga
    10561 taatgtatcc ctgcgacgct attaattgaa aattccagcg gaaggaataa aattgtgtga
    10621 gcggactttg cggaccaccc tggcaatata acagcgtcgg atattttttt gatggatcaa
    10681 agtttggcgg aaagatcacc cagacgagca tttgcttatt atcagttgtg gttacatatc
    10741 tccgttctgt tttgcacaac gcaagagcat tataagtact gtcattcacc gatgtgagtt
    10801 ttttcatgct gccgttatcc agatcaacag aataaatttc cgcagcatga ttcatgtctg
    10861 ttctcgtaac gattaaagaa tttcctgatt gtcctacgat agcagccaca tcataatcgc
    10921 ccttggtaat ttgcgtgaca actggaccga tctttgtcgc tccgggataa ttcacttgaa
    10981 acaattgaag cgttccgtct ttcggcgcaa caaaaaaaat attcttgtca tcatcactcc
    11041 acctaaacgc ttcaacatgg atatcgtctc tgcttgccgt caggttgatc ttcgacacac
    11101 cgtttgatac aacgatgtcc tgtttgtctg cctcataacc gtcccgcttc atactcagcc
    11161 acgccaggtc gcccttttta ttgaacgacg ggctaacatc gtagcccatc attccttcgg
    11221 taagattttt tgtagctcca ctttcaatat catattcata caagtctgtg ttagtactga
    11281 gcgtgtattc tgttccggat tttttctttg tgacataaac aacatgtttt ccatcggggt
    11341 tccatatata atctgcgccg ttgccaaacg gtttcagcgg acagtcgtaa ggttctcccg
    11401 ccatcagatc ttttctaacg gtgtcattaa ctgcattcaa aaacacatga ctgaatttcc
    11461 cgtcttccca tgtatcccaa tgacgataca tgagtgaatt atagatctgc acattgcttt
    11521 ttgggagcgc aggataaaaa tcatttccat atacgttcat caatttcaca tcgctgtcgc
    11581 tgatcttcca tttaccgttc ggcgaaacat gaatattctc catcatcgta tctgttcgat
    11641 tgatctcttc agcaacccca ccggcaaccg gtatgcggta gctcttcgtg ttcattttat
    11701 ttgcggagat atcaggcgtc gaaacagaat agagcacata ctgtttgtcc ttagatagcc
    11761 cgataggcgc cagtcgcccg agatgccaaa gcaattccgg gctcatagtg ctttgtgaaa
    11821 aagaaatcac aggaaggcaa accaaacacg ttataagaaa tcttttcatt tggaaatttt
    11881 ttcgggcgct aacttaacta tttctgctca cgtttaatgg atagcatttt cccggaggtg
    11941 cggaaaaacc ttttatccgc ctgtgtgttt cggaaatctg ataagtgaac gcgatattga
    12001 aaggcggttt aactgcttaa tgaaaaattg ttaacgcaga catattctgt gcagcacatg
    12061 atgagagtat tcgcaatcgc tctcgagcac ccaatatcca aataacccag taacccaaca
    12121 acatcctcac tcctgaaact tcgtcgacac ctctaaacga ttattatccg ggtcaagcgt
    12181 ttcgaattca tagtaaccat cacccgttct cctcggcccg cttaagatcc tgaaaccatc
    12241 gttctttaat tgtgcagcct tcaaatcaac gtccttcatc gaggcaacac cgaaggcgag
    12301 gtgaatgatg ccaagatgtt gcttttcgat cgtatcattt ttgttatttg gaatatcgat
    12361 catgctcatc agctcaagtc ttgcgccgga ttcaaaactg agaaagtaac tttcaaattt
    12421 cttttccgga ttgatgtatt tctgatttgg cacaccagca aaatatttgg agtaatattc
    12481 ccgcaacctt tcgaggttat ttgtccagat cgcgacatgc tccagtgtca tcttcaaaaa
    12541 tttatcgtta ttggtttttg ataagcagta atgagccaac gtttcatttc tttttcagca
    12601 taccattttt taaagatcga actcgacaat acagtatcga ctcctttaat gaatagccat
    12661 gaaggcatgg cgtttgcaaa tttgtataac cgctcttcgt cctgggagcg gcgatgcatc
    12721 tccctatcgt aaccgctaaa catttcggcg gcaaaagaat tttttttcac ggcgcgttca
    12781 atgtaatgcg cagcgatata accggacaac attgcaggac caattccctc tcccgatttc
    12841 gggcacacaa gagaagcggc atcgcccgta agcagccatc cgtctccgtg agcttttcga
    12901 tgtaatgttg ccatcggtat tccccaaccc ctgatctcct ccaggggctc tgcctcttta
    12961 aaccgtgttg agatgtaagg atcgctgcgg attatttctt gcagtgtttt cctgacatta
    13021 atattttctt tcgccacatg ataactggcc atcccaaaac cgacatttgc gtcgtgatcg
    13081 tttaacggga atatccagaa ataagcaaaa ggatactttt ccggaaaata tatctctatt
    13141 agtttttgcg gatgaatacc ctgcacattt ttccaatatt gtcttatggc ggcggcgtaa
    13201 tgttttcgat caattgcacg atcgcttacg tgttttaaaa caacggaatg atctccgtcg
    13261 gcgccgacaa gcatccggca ccgaattcgt aattgttttg aatgggcctg gccttcgaga
    13321 agccagtcct ctccttgctt tgtaattttt tctatcgtgt atcccaggcg aagatccgca
    13381 acgtttttat cgatcttatt cagcaaaaac tcatcgaagc tcgttcgacg cgatgtataa
    13441 aaaacaggct gtttgaaaag tgtattccca ttgcctgcgc acatgaggtc aacatatttt
    13501 cctttcggta aaatgaaacg catgcccata gacggcataa aaagctcttc attggagaat
    13561 tcatttttta tgatcgaagg atcgatgttg ttcaaaacgc gcaccacttt caggtcaagc
    13621 ccgtcgccgc agatcttatc acgcggaaaa accgcggcat caatgatcaa atgcggtatg
    13681 cccattttgc tgagcacaat ggaagttacg gacccagccg gtcccgcgcc aacaatgcag
    13741 atgttcgttt cgatcgtctc caccaccggc tcaaattaaa gctttttggt gttttctttg
    13801 cgaacacagc gctggtcatc ccgacgtaca gagagatctt aacgaacaga tattcagaga
    13861 tgtctcctgt cgtcgacatg acatggcggg gctttgcctt cgttttttcg gggcaacgag
    13921 agatctcagc aaccaggtta tcttttcaaa aacttattcg cgacaagttt ttgcatcaca
    13981 tcttctttat tgttgcggct aatcggaacg cgaaactgcc caagatgcag ctcattgcca
    14041 tcaacggcat ctaccctggc aagttgaact atgtatgatt tatgcacttt gaggaaaaga
    14101 tcatgcggga gattatcctc gatgcttttg aaagtgagat atgtgatata ttttttgtct
    14161 gcggtgtgaa cgcacacata gttttgcaat gcttccacgt acaaaatgtt tttaaagaaa
    14221 atttttacga gcttgttgtc agctttgata aatatgtagt catcttttaa atcctgtgct
    14281 ggttgttcgt ggtgtttcaa ttcaagttgt tcttttgctt ttacaaccgc tttcaaaaaa
    14341 cgcggaaatg aaattggctt cacgaggtag tcgagcacat tcaactcata tccttccaaa
    14401 gcaaattgcg ggtaagccgt tgtaagaatc accaacggcg gatgggcaat tgttttcaaa
    14461 aagtcaatgc cagtgatccg cggcatttga atgtcgagaa agatcagctc gatcttatgt
    14521 aaagtcattg ccgtcccggc ttttaatgcg tcctcgtaaa caccctcgag atgcagaaaa
    14581 tcgacgtcat gcacatattc ggtaagtcct tttcgtgcca gtggctcatc gtctatgatc
    14641 gcgcaactta ttttcatgtt ttcctcaatt tagttttaca tcgagacagg ctttgaacca
    14701 tccgcctgct tcttccgtgt ggaattcgtg cttttcagga tataatagtt ccagtcgcct
    14761 tttcaaattc ttcagcccta tgccgccttg tctcacaagc tcattcgcgt tggaggtgtt
    14821 catagtattt tcaactttaa aaacaagatg atcgtttttc gacgtcagcg agacgttgat
    14881 gatatctttc tgcccgttgt caaaatgaga taaatgtttg aatgcatttt caacaaaagg
    14941 aacgagcagc aacggttcaa tacgggcact tgtgtctata tccgaaactt caaaatgcag
    15001 ttcacagtta tcgtttcggc gcagtcgctg caccgcaata taatctttca gaaagttaat
    15061 ttctttctct atcgtagttt cttgtccgtc gcattcgtac aactggtagc gcagcatttc
    15121 agaaaaagtg tgcaatgcac ctcgagcgtc tgtgtttttt ttgtcaatca aaaaatacac
    15181 tgaattcaac gaattaaaca ggaaatgcgg gtttagctgc gacttgagga aattcaactc
    15241 agcctcagct ttttccgtgg caatctcgac tatgcgtttc tgagctctgg cataatcaag
    15301 caagagcttg aaggcaactc ctgaagtcac gagcaggaag tgagggatcg tgttgtcata
    15361 cattcgtgcc ttgaaacggg tatgcaggtc gaacatgccc gggttatgca tgatcaaacc
    15421 ttcgagatac attttaaaaa gactgaagct aaatacaagt aaaaaataca tcaatccgaa
    15481 aagcaggtat ttcttctcgt acaacagttt aggcacgagt agataattac tgatataaac
    15541 gaggatcgca aggtcgagta cctttaaaaa agtaagacgt gccgccaacg ccggtgaacc
    15601 aaaatcctgg tagcgaaaaa aataccatcc tgcaaaaaat aacacccaaa aaagtaagtg
    15661 gtaaaaaatc gccttatatg tcttttttgc gggcatcact tcaaaataaa tataggaaaa
    15721 aacgatggca tgccatttta cacgaaacgc gtttttgtcg ttgcataatg cagaatcgac
    15781 tatacatcaa tcaagattgc atgttcgtgt aaatattctt tacaggaccg gcgcatgtgc
    15841 gaactttcgc aaaaatgttg tatgaaaaac atagtttctt tatccgcatg cttttgcctc
    15901 atagcacttg caggttgcgc gcaaacgcct cacaagaata gcagcgaccg ccgggttggt
    15961 ggaagttgtg aaggatgtga agcgatcaac tcgagtccag ttgcgtttga aaaattattg
    16021 tggatcgaca cgctgccgga ttttaatgag ccgggcccaa aactcatcat cagtggtgtg
    16081 atctacaaac atgatggaaa aacgcccgcc ccgaacgtgg tgttgtatgt ctatcatact
    16141 gaccaaaccg gccactacac aaataaatac aatgaaccgg gttatgcagg acgcaatggt
    16201 tatatcaagg gctggatgcg aacaaatgaa aaaggagaat acaagttcta cactttgctg
    16261 cccgggcatt atccgggcac gaccgtaccc gcgcacattc atccgatcat caaagagcca
    16321 ggcatgaacg aatattacat tgatgaatat ttatttaatg atgacccggt tcttaccgcg
    16381 gacgaacgca gtaaacagga aaagcgtggc ggcaacggca ttatttccct tgaaaagaaa
    16441 aatgggattc tttacggccg aagagatatt atcttagggt tgaatgtgcc cgactaccct
    16501 gattgatttt tttttcgcaa taaagctgca atctgcatcg cgtgatccgc gctttcaaaa
    16561 tgatgccgag tattttcagc tcgttccttt caatctgctt taaactgaag cacggctaaa
    16621 aaatcttctg aaaaatattt cattttcttc aaattgtttg gcctcattcg ccgaaaagct
    16681 aaatcaattc tttaagagtc agctaagaac gatctgaatc ttatttttgg atcgtgggct
    16741 ttgaacaata aaagaagtcg ccgcggcttg catcgtgcgg gcatgatcag aaaaaatcca
    16801 gcgcaagtcc ttagaataaa ttttacagca gtaaagaaag aaaaacaaga atgatatcaa
    16861 tcgttgagaa actcatcaaa acttttggaa gcgaggctgt gctaaccgca gaggaagcgg
    16921 caatgcgtgt tgcaagcaac tggcggcaac atgaaaacct gcgatgtctt gcgctgctac
    16981 ggccaaaaaa tacgcagcaa gtttcacaga tgcttaagat ctgcaatgaa tttaatcagc
    17041 ctgtcgttcc ccacggcggc ttaacaaacg ttgtgggcgg tgtggttaca aacgaaaatg
    17101 aaattgcctt aagccttgaa caaatgaacc gggttgaaga gatcagcgtg caaaacaaaa
    17161 ctgtgactgt acaagccggt gtggtgttac agcagctcca aaagatcgtt tcagaaaatg
    17221 gtatgttgtt tccgctcgat cttggcgcaa aaggaagctg catgataggc ggcaacatcg
    17281 cctccaatgc gggcggcctg cacgcactcc gttacggtgt tgcccgaaat ctcgtattag
    17341 gattagaggt tgttttagca gatggtacaa tcatttcatc aatgaacaaa atgatgaaga
    17401 ataatgcagg gtacgatcta aaacagctct ttatcggctc tgaaggcaca ttagggatca
    17461 taaca
//
LOCUS       DASQJI010000054        12371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_618218,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000054 DASQJI010000000
VERSION     DASQJI010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12371
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618218"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VEV83_01790"
     CDS             complement(<1..245)
                     /locus_tag="VEV83_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK43870.1"
                     /translation="MAATATLSSPPSVERPRLTVSQLFNMSFGFFGIQFGFALQNANV
                     SRIFQTLGADLDKIAILWIAAPVTGLLVQPIIGYLSD"
     gene            complement(387..1922)
                     /locus_tag="VEV83_01795"
     CDS             complement(387..1922)
                     /locus_tag="VEV83_01795"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HYK43871.1"
                     /translation="MSGDITSKHILLFGAGKSATVLIEYLKQLATEKNWQVTIADSDA
                     EAVQKKVGRHSNVFPVAVDVTNGEERDRYVKQADLVISMMPPHLHYLIALDCLTNKKH
                     LLTASYLDEQIKELAPRIKDSNIFFLYEMGLDPGIDHMSAMKLIHSIKEKGGEITSFK
                     SHCGGLIAPESDDNPWHYKISWNPRNVVMAGKAGALYKENGKEIHLPYEKLFSLENSV
                     EVPGSGWFSYYPNRDSLSYLPLYELTGIETFVRTTLRHPDFCFGWKNIIDLKLTNEEK
                     AYETDGLSISAFFKQHFEKFGFSEWLTKLLSSRLEYAKNMMEQLMNLMQAEQEAISEG
                     ENPEDDFMMIDEKGQLTTLNVDEVKNRAAESVAVQMHEANLTLKQLFFLGLNDDAPIN
                     RGLCSAADILQFILETKLALKPDDKDMIIMLHELEYEDPQFGKGSARRVQKLKSCLVV
                     KGEDNLNTAMAKTVGLPLGIATKLILEGKINEKGLHIPVLPTIYEPVLEELKKHDIFF
                     NES"
     gene            complement(1966..3657)
                     /locus_tag="VEV83_01800"
     CDS             complement(1966..3657)
                     /locus_tag="VEV83_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43872.1"
                     /translation="MSSKIYRLLRDNKEQGPFTSEELIQKGFKRYDLIWVDGRSAAWS
                     YPGELPEFKLYVPEPEEQPFDRFFKKETDSVSPAVQAAVAINDTTIQTQTKQPKPRYK
                     VSAAWSRIQTITVPLNREQMVSRNNEHTPLSTSGTETAFQSKPMSWEDAWRDWEKEKS
                     QVRPQQYDPYPPQQKIQVQPEPVVAVAQPIFPAQTQSINERFAESPLLETKYSEPLDS
                     LKDKYIDNLLKQKKKSNIGFSLGRLSELVVPCIALFVIFSIGYWLLHNDNKTAAALGS
                     SPTQTAQPAASNPASELPSTLNTNATDNSATEIETAKQPEVQEKPVTNQPTVVARTEQ
                     KKVAGTQKITTNIARTNIAVNNDVAASEKVNTTKKLTDSKALPTASNTNKIQENKSNT
                     SSSSKLFDPKVINNVPRDNALNDKSSGAPGDLNAAENRPVRRRTNGGDITGKQSGTNN
                     DAASDQPTVSKRSTGKANLKYVNVPQYVEMDNGTGSVKIENVSDVDLDLVVVDVQYYD
                     ASSRFRKGETLYLHNLKAGRSVVVKTPRDLNSQYATSKVALVSADSKGVYIVGDN"
     gene            3918..4808
                     /locus_tag="VEV83_01805"
     CDS             3918..4808
                     /locus_tag="VEV83_01805"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HYK43873.1"
                     /translation="MQTPKGKLIAIGGAEDKGTEVEKGEIHKNNLNFFELGILRRIVE
                     EAGGVKKRIEVITTASMIPHQVGENYLNAFGKIGCVNVGIMHIRNREDMLQPEYMQRL
                     KACDCVMMTGGNQMRLTATLGGTEFLKTLRDRYLNEKIVVAGTSAGAMAMSSTMIYEG
                     NPFRAHLKGEVRITTGLRMIDNVIFDSHFEKRGRFVRLAQAVASNPACIGIGLGEDTG
                     MIITHGNRMEAIGSGLIVIIDGHEVIHTNIADIPEGNPMSIENLHVHFCARGNGYIID
                     ERRFVEKMGKETTPFMTDVF"
     gene            4818..5504
                     /locus_tag="VEV83_01810"
     CDS             4818..5504
                     /locus_tag="VEV83_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HYK43874.1"
                     /translation="MNITSKLVWVFLFVAVFLLMSFLRDRNKTNKVIFFGDSITQMGV
                     NPGGYISLMKDMLVQQNITNYDLVGAGIGGNKVYDLYLRMPQDVIAQSPDIVVIYVGV
                     NDVWHKATYGTGTDADKFEKFYRAIVRELQAHNIKPMLVTPAVIGEKNDYSNQQDGDL
                     NKYSQIIRNIAKDLALPLCDLHAVFHTYEVNNNTANADKGILTTDGVHLNDAGNKLVA
                     EEMWKVLKTM"
     gene            complement(5616..6518)
                     /gene="xerD"
                     /locus_tag="VEV83_01815"
     CDS             complement(5616..6518)
                     /gene="xerD"
                     /locus_tag="VEV83_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HYK43875.1"
                     /translation="MWDSYKKGYKAYLQLERSLSDNSVEAYIRDLEKLTQYLQATGQL
                     KSPAEIQLKDLQDFVRWIAELGMNAASQSRVVSGIRNFFKYCVLENIVTKDPSVLLDT
                     PKLSRKLPDVLSFEEIERIISQVDVSTADGARNKAILETMYSCGLRVSELVNLKISCF
                     YPDIGFVRVIGKGDKERLVPIGRDAIKFIRIYKDQVRVHTMPQKNFEDILFLNKFGKS
                     LSRVMIFYIVKDLAKKASIAKNISPHTFRHSFATHLVEGGADLRAVQEMLGHESITTT
                     EIYTHLDRDYLRATLHQYHPAFRK"
     gene            6752..7186
                     /locus_tag="VEV83_01820"
     CDS             6752..7186
                     /locus_tag="VEV83_01820"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HYK43876.1"
                     /translation="MRRIEKKAPRALDSSIAIINTEVWQEVDCLSCANCCKQMSPTYN
                     SKDIRRISRHMKMTPAQFKEKWLHYDKKEGDWLNKSLPCQFLDLETNLCKIYPIRPDD
                     CAGFPHLAKKKMVDYMHVHKQNISYCPATYKMVEKMMERMPV"
     gene            complement(7291..7647)
                     /locus_tag="VEV83_01825"
     CDS             complement(7291..7647)
                     /locus_tag="VEV83_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HYK43877.1"
                     /translation="MNWNQTTGSKGEELAADHLSKRGYAIIERNWRFRNAEVDIIAAK
                     QNRLHFFEIKTRTSGRYGKPEESMSYKKMKMLKTAAEEYQYQHMEWKYVQFDVLAITI
                     VNGTPTEYFLIEDVYF"
     gene            7674..8876
                     /gene="manA"
                     /locus_tag="VEV83_01830"
     CDS             7674..8876
                     /gene="manA"
                     /locus_tag="VEV83_01830"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HYK43878.1"
                     /translation="MLQDKIFKLKGKVQPYAWGGKEFIPAWLGVENRDEKPFAEYWMG
                     AHPSASSTVIIDNAEQSLYDLIKKRPVEFLNEQVAAEFGELPYLLKILDVKDMLSIQV
                     HPSKEAAKIGFDEEEEKGVPINASNRNYKDKNHKPEVMVALSEFWLLHGFLPETKLLH
                     VLRRVPEFNGFEKFVKSTGYKGLYEHVMTMPQKEVNKLLRPVVEKAIAFRKENKITKH
                     QPGWWAAKLYEHVEPTDIDRGLFSIYFFNIVRLRPGEAIFQGAGVPHAYLEGQNVELM
                     ANSDNVLRGGLTPKHVDVPELMKQVVFESIEPKILNGVPLKNGEINYPCPVRDFGISK
                     IELQPSDNYQAASRSFEILVAIKGSFTIKNGKSLQVKKGEAVAILPNEAYEISTNDHL
                     LAYKAFVP"
     gene            8915..9493
                     /locus_tag="VEV83_01835"
     CDS             8915..9493
                     /locus_tag="VEV83_01835"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HYK43879.1"
                     /translation="MKLSRQLIIFFFILIAVTTIVKIICAPQINLSGFSTVIAVALFA
                     GITVKEKKFAFLLPLLALFISDSLQQLLYVLNLFPYEGFYSGQLYNYALLVLITLVGI
                     GLRNYKTPGIIAAAFIGPTVFFLLSNFVVWKTQGSFMGYSNDINGLLQSYTLGLPFYR
                     NSLLATIIFLPAFIGFYHWMKYRKFSLQVADK"
     gene            complement(9613..10215)
                     /locus_tag="VEV83_01840"
     CDS             complement(9613..10215)
                     /locus_tag="VEV83_01840"
                     /inference="COORDINATES: protein motif:HMM:NF015423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HYK43880.1"
                     /translation="MELVQVIAYSGVFVFAITGALKARKHRMDIFGAAVLAFVTAYGG
                     GTIRDLLLGIRPVSWVNDYIALSLVIGAVMIVSLVRRSSIKFIRTIFITDAIGLGLFT
                     STGIEIALHNDINSAYAVVMGVITGTFGGLLADILSNTIPDLLKRGELYATASLIGGL
                     IYILFLKAGIPHNVDQLVCVVVVVAVRIISKVKRLVLPDI"
     gene            complement(10256..10843)
                     /locus_tag="VEV83_01845"
     CDS             complement(10256..10843)
                     /locus_tag="VEV83_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43881.1"
                     /translation="MMRFKIYRAIAFIFFLLTLAVSFPPLRSSERWTDVRMVITIVIA
                     ILFFVCYSFLLSIFNYYEEPGWKNVAVIIFLSGNSVFYFLPLTRAIPNLFFNFSLLIF
                     YMPLIVAFATLNEKEIKPLTQSFAYLMLIICLLHIVLPFVRGTIDLSGYSYAFNAIFL
                     LPSALMVLLFHRMAILSAKENEEQSESDEQQHDLL"
     gene            11040..12341
                     /locus_tag="VEV83_01850"
     CDS             11040..12341
                     /locus_tag="VEV83_01850"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK43882.1"
                     /translation="MRNYFPIILLVCLGCQKIDPSLHAPGTSSHMKADSTSQPNIILI
                     VADDVGYELLTCNGGESYETPHLDAMANAGVRYANCHGTPDCSPSRFMLLTGKYNFRN
                     YKQWGVMDTSNRTIGNMFRDAGYSTCFVGKWQLDGFEPSIHALGFDKYSVWQPSQEDS
                     AGSRYKSPHIYENGAYLPDSVTLNKYADDWFTDYLSHFRDTVRKPYFIIYSMSLCHGP
                     FSPTPDDTKFAIWTPDKRGDPKYFPSMVKYMDKKVGQIIDSTDENTVVIFAGDNGSPQ
                     EITSIWNGDTVVGAKNSLTIFATHVPLILYRKGYPARVDSSLVDFTDFMPTLASISNI
                     PLPINYGILDGTPFYPTSTREWVYCYFEPRPYLDAQATWVHNKVYKRYGADSLLGPQK
                     NKLYNIALDPYEQHILGQKKQTPEEHAIDSTFKKILKSMHN"
BASE COUNT         3404 a         2776 c         2785 g         3406 t
ORIGIN      
        1 ctgtcactta aataaccaat gatgggttga accagcaacc cggtaacggg agcagcgatc
       61 cataaaatcg ctattttgtc aagatctgct ccgagcgtct gaaaaattct gctcacattc
      121 gcattctgca gggcaaagcc aaattgaatt ccgaaaaaac caaaactcat attgaataac
      181 tggctaaccg taagccttgg tctttctaca gaaggtggcg aagagagagt agcagttgcg
      241 gccataacca tcgtttaggc aacaaatatg tgtaaaaatc acatacccat gaaaggaaat
      301 cttgagggcg tcagtttaag gattactccg cagatgggat tgcgtcagga tttgggattt
      361 aggaattagg atttgggatt tacaggtcag gattcattaa agaagatatc gtgctttttc
      421 aattcttcaa gcacgggttc gtagatggtc gggagcaccg gaatatgcaa tcccttctca
      481 ttgatctttc cttccaggat aagtttggtc gcgatgccaa gcggtaaacc tacagttttt
      541 gccatcgcag tgttgaggtt gtcttcacct tttaccacca ggcaactctt aagtttttgc
      601 acccgccgtg cactgccctt tccaaattgt gggtcctcat attcgagctc atgcagcatg
      661 atgatcatgt ctttatcatc cggctttaag gccagctttg tctcaagaat aaactgtagt
      721 atgtcggccg cgctgcataa accgcggttg ataggcgcat catcgttcaa tcccaaaaaa
      781 aataattgtt tcagagtaag attagcttca tgcatctgca ccgcaacgct ctcggctgcg
      841 cgattcttta cttcatcaac attcagcgtc gtaagttgcc ctttctcatc gatcatcata
      901 aaatcatctt ccggattttc gccttcgctt atggcctcct gttctgcctg cattaaattc
      961 atcaactgtt ccatcatatt tttcgcatac tcaagcctcg aactcaacag cttcgtcagc
     1021 cactcactaa aaccaaattt ttcgaaatgc tgtttgaaga atgcggagat gctcaggccg
     1081 tccgtttcat aagccttctc ttcatttgta agcttgagat cgataatatt tttccagccg
     1141 aagcaaaaat caggatgccg caatgtggtg cggacaaagg tttcgatgcc ggtcaattca
     1201 tataacggca gatagcttaa tgaatcacgg tttggatagt aagagaacca gcctgagccg
     1261 gggacttcaa cgctattctc cagtgaaaat aatttctcgt atggcaggtg gatctctttg
     1321 ccgttctcct tgtacagggc accagctttg ccggccatta caacattgcg cgggttccag
     1381 cttattttgt aatgccacgg attgtcatcg ctttccgggg cgatcagtcc tccgcaatgc
     1441 gatttaaaag atgtgatctc gcctcctttt tctttgatgg agtgtatgag cttcatggcg
     1501 ctcatatgat caatgccggg atccaaaccc atttcataca ggaaaaaaat attgctgtct
     1561 tttatccttg gtgcaagctc tttgatctgc tcgtcgagat acgaagcagt cagcaaatgt
     1621 tttttatttg tcaggcaatc aagtgcaatt aaataatgaa ggtggggagg catcatcgaa
     1681 atgaccagat cggcctgctt cacatagcgg tcgcgttctt cgccattcgt aacatcaaca
     1741 gcaaccggga atacatttga gtggcggccc accttctttt gcactgcttc agcatcactg
     1801 tcagcgatcg ttacctgcca gtttttttcg gtggccagtt gttttaaata ttcgatgagg
     1861 acggtcgcag atttgcctgc cccaaaaagg agtatatgct tagaggtgat atcgcccgac
     1921 atcgaaaaaa tttatgggca aagttaagct ggttacgccg agattttagt tgtcgccgac
     1981 aatatagacg cctttcgaat cagcgcttac aagggcaact tttgaagtgg catactggga
     2041 gttcagatcg cgcggcgttt tcaccacgac actccgtcca gccttcaaat tatgcaggta
     2101 tagagtttcg cctttccgga accggctgga ggcgtcgtaa tattgcacat caacaacaac
     2161 aagatcgagg tccacatcgc tcacgttttc aatctttacg ctccccgtac cgttgtccat
     2221 ttctacatac tgcggcacat tcacatattt caaattggct ttgccggtcg aacgtttgct
     2281 tactgttggc tgatcgctgg ctgcatcgtt atttgtaccc gattgctttc cggtaatgtc
     2341 gccgccattt gttctccgac gcaccggcct gttttcagcg gcgttaagat cgccgggagc
     2401 tccggaagac ttgtcgttaa gtgcattatc cctcggaaca ttattgatca ccttcgggtc
     2461 aaatagtttc gagctcgagc tagtattcga tttattttcc tgtattttat tagtgttcga
     2521 agcggttggc agagccttgc tgtcggtcaa tttctttgtc gtatttactt tctctgatgc
     2581 agctacatcg ttgttaaccg cgatgttggt ccgcgcaata ttggtggtta ttttttgcgt
     2641 tccggccact ttcttttgtt ccgtccgcgc aacaaccgtt ggctgatttg tcaccggttt
     2701 ttcctgaact tccggttgtt ttgctgtctc aatttcggta gcgctattgt ctgtcgcgtt
     2761 cgtatttaag gttgacggaa gttcgctcgc cggattggat gctgcaggct gtgccgtttg
     2821 tgttggcgag gagccaagag ccgcagcggt tttgttatca ttgtgcagga gccaatagcc
     2881 aatactgaaa ataacgaaca gcgcgataca tggtaccacc agttctgaca gccttcccaa
     2941 tgaaaatcca atgtttgatt tcttcttttg cttaagaaga ttgtcaatgt atttgtcctt
     3001 aagagaatcc agaggttctg aatacttggt ttcgagaaga ggggattctg caaagcgctc
     3061 gtttatgctt tgtgtttgcg ctggaaatat aggttgagca acggccacta caggctcggg
     3121 ttgaacttga atcttttgct gaggtggata aggatcgtat tgttgagggc gaacctggct
     3181 cttttctttt tcccagtcgc gccacgcgtc ttcccaactc atcggctttg actgaaaggc
     3241 agtttcggta ccggaagtgc tcaagggtgt gtgctcatta ttccggctaa ccatttgctc
     3301 ccggttcaat ggcacagtga tcgtttgaat acggctccag gcagcagaca ctttataacg
     3361 cggcttgggc tgtttagttt gggtctggat ggtagtgtca tttatagcta cagccgcctg
     3421 tactgcaggg cttactgaat cagtttcttt cttgaagaag cgatcgaaag gttgctcttc
     3481 cggctccggc acgtatagtt tgaactccgg taactcaccc gggtaactcc aggcagcgct
     3541 ccgaccatcg acccatatga gatcgtatcg tttgaagcct ttttgtatga gttcctcgga
     3601 agtaaagggc ccttgctctt tgttgtctcg caaaaggcgg taaattttac tgctcatatt
     3661 aacgtgttag ctataaatgc ggaaacgtgt gcaatattgc aatggctatg ataattttcg
     3721 gctccaatag tttaacgcaa aaaggccaaa atttatttcg tggctgagcc ccaccgtacg
     3781 ttgcgatcgt ttcccgaaaa tctcaaaccg aaaaaagtca gccttttcct catgttattc
     3841 acgccgcgtt gattgttaac gcttttctac atccggcaca aaatcaattg acgtactttt
     3901 gcccaaccag tttaattatg cagacaccaa aaggaaaact aattgcgatc ggaggtgcag
     3961 aagacaaggg aacggaggta gaaaaaggcg agattcacaa aaacaacctt aatttttttg
     4021 agcttggcat tcttcgacgc attgtagagg aagccggggg agtcaagaag cgaatagagg
     4081 tgatcaccac cgcctcaatg ataccgcacc aggtgggtga gaactacctg aatgcgttcg
     4141 gaaagatcgg ttgtgtgaac gtgggcatta tgcatattcg caaccgcgaa gacatgctgc
     4201 aacccgaata catgcaaaga ctgaaagcct gcgattgtgt gatgatgacg ggcggaaacc
     4261 agatgcggct aactgcaaca cttggcggca ctgaatttct aaaaacactc cgggaccgtt
     4321 atctcaatga gaaaattgtc gtggccggca catctgcagg tgccatggct atgagcagca
     4381 cgatgatcta tgagggcaac ccgttcaggg cgcatttaaa aggtgaagtg agaataacga
     4441 cgggccttcg gatgatcgac aacgtaatat tcgattcgca ttttgaaaag aggggacgct
     4501 tcgtgcggct ggcgcaggct gttgccagca atcctgcgtg catcgggatc ggccttggcg
     4561 aggacacggg gatgatcata acccacggca atcgcatgga agcgatcgga agtggtttga
     4621 tagtgattat cgatggccat gaagtgatcc acacgaatat tgccgatatc ccggaaggga
     4681 atccaatgag catagaaaat cttcacgttc acttttgtgc aaggggaaat ggttacatca
     4741 tcgacgagag acggtttgta gaaaaaatgg gtaaggaaac cactcctttt atgaccgatg
     4801 ttttctaaat tcatttcatg aacattacca gtaaactcgt ttgggtcttt cttttcgttg
     4861 ccgtatttct acttatgtcc tttttaagag accgcaataa gaccaataaa gtgatcttct
     4921 tcggcgattc gatcacgcaa atgggtgtca acccgggtgg ttatatttcc ctgatgaagg
     4981 acatgcttgt tcaacaaaat attacgaact atgatctcgt tggcgcaggc atcggaggaa
     5041 ataaagtgta tgacctttac ctgcgaatgc cgcaggacgt tatcgcccaa tcgccagaca
     5101 ttgttgtgat atacgtcggc gtgaacgacg tgtggcacaa ggctacgtat ggcacgggca
     5161 ctgacgcgga caagtttgaa aaattctatc gcgccattgt tagggagttg caggcacata
     5221 atatcaaacc gatgctggta acgccggcgg tgatcggaga aaaaaatgac tacagcaacc
     5281 agcaggatgg cgacctgaat aaatactccc agataatccg gaatatagcg aaagacttag
     5341 cgctccctct atgcgacctg cacgctgtat ttcatacgta cgaggtaaat aacaacacgg
     5401 cgaacgccga caaaggtatt ctcactaccg acggtgtgca tttgaatgac gccggaaata
     5461 aattggtagc ggaagagatg tggaaggttt tgaaaacaat gtaacgattg cagattggcg
     5521 attgcagatt gcggattgac gactcgcgtt taacattcac aatttgcgat cgactactcc
     5581 ggcttgaggc taactcatca ctcattattg atcactcatt ttctgaacgc cggatgatac
     5641 tggtgcaacg tcgctctcaa ataatcgcga tcaagatgtg tatatatttc ggtggttgtg
     5701 atgctttcat ggccaagcat ttcctgcacg gcacgcaggt ctgcgccgcc ttcaacaaga
     5761 tgcgtggcga aagaatggcg gaatgtatgc ggtgagatgt ttttagcaat gcttgctttc
     5821 tttgccaggt ctttcacaat gtaaaatatc atcactcttg acaggctctt gccgaacttg
     5881 ttcaaaaaaa gaatgtcctc aaaatttttt tgaggcatcg tatgtacgcg cacctggtct
     5941 ttataaattc gtataaactt gatcgcatcc cggccaattg gcacaagccg ttccttgtcg
     6001 cctttcccga tgacgcgaac aaaaccgata tcaggataaa agcaacttat cttcaggttt
     6061 accagttcgc ttacgcgcaa accgcaactg tacatcgttt ctaaaattgc cttgttgcgg
     6121 gcaccgtcgg ctgtgctgac atcaacctgg gaaatgatcc gctcaatttc ttcgaaactc
     6181 aaaacatccg gtagctttcg actaagcttt ggcgtgtcaa gtaaaacaga cgggtctttt
     6241 gtaacaatgt tttccaacac gcagtattta aagaaatttc tgataccgga aacgacccgt
     6301 gattgcgacg cagcattcat gccgagttcc gcgatccagc gcacaaaatc ctgcaggtct
     6361 ttcaactgaa tttctgcagg agatttcaac tggccggtcg cctgtaaata ttgcgtcagc
     6421 ttttcaaggt cgcgaatgta ggcttcaacg gagttatcgc tcagcgagcg ttccagttgc
     6481 agataagctt tgtatccttt cttatatgaa tcccacatga caatttacga tttacaattt
     6541 gctatttaca attgcacatt gcagatttga cactaaatat gctgcttgct accaaatcca
     6601 ccattcacaa ttgaccattc acaattcaca attccttact ttcgcaaacg caaatgcaat
     6661 atacaatctg ataccaacgt ccatgcaacc cgttaatcta tattccttca ggaaaaagct
     6721 aagccttcga aaaaaaatgt ttttaaaata tttgcgaaga attgaaaaaa aagctccgcg
     6781 tgcattagac agcagtattg ccataatcaa cacagaggta tggcaggaag ttgactgcct
     6841 tagttgtgcg aattgctgca aacaaatgtc gccgacgtac aattcaaaag acataaggcg
     6901 tatttcacgt catatgaaga tgacgcccgc tcagttcaaa gagaaatggt tacactacga
     6961 caaaaaagaa ggcgactggt taaataagtc tttgccctgt cagttcctcg acctggaaac
     7021 aaacttgtgt aagatctatc ccatcaggcc cgacgattgc gccggctttc ctcatcttgc
     7081 aaagaagaag atggtcgatt acatgcacgt acataaacaa aatatttcct actgccccgc
     7141 cacatacaaa atggtggaga agatgatgga acggatgcct gtttgatgtc tgaggtttga
     7201 ggtttgaagt ttgaagttca acatacatca gacatcctac atcatacatc agacatcata
     7261 catcctacat catacatcct acatcctgcc tcagaaatac acatcctcga tcaaaaaata
     7321 ctcagtcggt gttccattca cgatcgtgat ggccagtaca tcaaactgaa catacttcca
     7381 ctccatgtgc tgatactgat attcttcagc cgcagttttg agcatcttca tctttttgta
     7441 gctcatgctt tcttcgggtt tgccataccg accggaggtt cgcgttttga tctcaaagaa
     7501 gtgaagccga ttttgctttg cagcgataat gtcgacctca gcatttctaa aacgccagtt
     7561 acgttcaatg atcgcgtagc cgcgttttga aaggtggtct gcagcaagtt cttcgccctt
     7621 actgccagta gtttggttcc agttcaaaat aatatcttta agggtttaca aatatgttac
     7681 aagataaaat ttttaagtta aaaggaaaag ttcaacctta tgcatggggt ggaaaggaat
     7741 ttattcctgc gtggcttggc gtggaaaacc gtgacgaaaa acctttcgcc gaatactgga
     7801 tgggcgccca tccttcagct tcatcaaccg tcatcataga taatgcggag cagtcgttat
     7861 atgatctgat caaaaaacgt ccggtagaat tcctgaatga acaagtggct gcagaatttg
     7921 gtgagctgcc ctatcttcta aaaattcttg acgtaaaaga catgctcagc atacaggtcc
     7981 atccctcaaa ggaggcggcg aagatcgggt ttgatgaaga agaagagaaa ggcgttccga
     8041 taaatgcttc aaatcgcaat tacaaagaca aaaatcataa gcccgaagtg atggtcgcgt
     8101 tgagcgaatt ttggttgctt catggcttcc tgcccgaaac aaaattattg cacgttttaa
     8161 gaagggtacc ggaatttaat ggatttgaaa agttcgtcaa aagcacaggt tacaaggggt
     8221 tgtatgaaca tgtgatgacg atgccgcaaa aagaagtaaa taaattattg cggccagtgg
     8281 ttgaaaaagc gattgctttc agaaaggaaa acaaaatcac aaagcaccag ccgggttggt
     8341 gggcagcaaa attgtatgaa catgtcgaac ctacggacat agacaggggg ctcttttcca
     8401 tttatttttt taatatcgtg cgcctgcgtc cgggcgaagc gatcttccag ggagcaggcg
     8461 tgccgcatgc atatcttgaa ggccagaatg ttgagctgat ggcgaacagc gacaatgttc
     8521 tgcgtggcgg cttaacgccc aaacatgttg atgtgccgga attaatgaag caggtcgttt
     8581 tcgagagcat tgaaccgaaa attttgaacg gagtgccgct gaaaaatggt gaaataaatt
     8641 atccatgccc tgtacgcgat ttcggcatca gtaaaattga attgcagccg agcgacaatt
     8701 atcaggcagc ctcgcggtca tttgaaatac ttgtggcaat aaaaggttct ttcaccatca
     8761 aaaacggcaa gtctttacaa gtaaaaaaag gagaagcggt ggcgatcctt ccaaacgagg
     8821 cgtatgaaat atccacaaat gatcacctgc ttgcttataa ggcttttgtg ccgtaatcca
     8881 tattgactta tttttgtttt tcaaatcacc cattatgaaa ttgtccaggc aactcattat
     8941 ttttttcttc atcttaatag cggttaccac gatcgtaaaa atcatctgtg cacctcagat
     9001 caacctgagt ggttttagca ccgtaatagc ggttgcgctg tttgcaggca tcacggtcaa
     9061 agaaaaaaag tttgcattcc tgcttccgtt gcttgcactt tttatcagcg attcactgca
     9121 gcagctttta tacgtgttga atctttttcc gtacgaagga ttttatagtg gccagctgta
     9181 taactacgcg ctgctcgtgc tgatcacgct cgtgggtata ggcctgcgga attataagac
     9241 acccggaatt atcgctgcag cattcattgg gcctaccgtt ttcttcctac tttccaattt
     9301 tgtggtatgg aaaacacaag gcagctttat gggatacagt aacgatataa atggtttgct
     9361 tcagtcgtac acacttggcc ttccttttta ccgcaacagt ttactcgcaa cgatcatatt
     9421 tcttcctgcg tttataggat tctaccactg gatgaagtac cggaaattca gcctgcaggt
     9481 tgcagataaa tagacaacca cttcggtttg taacttcaaa ccggtacctg ttccacatag
     9541 gatttttatt ctcgacttcc caggttcaaa attcgtgcaa gcgtatgcga tcgttgcaac
     9601 tgcgccgaat cgctaaatat caggcaagac caatcgcttt accttggaaa ttattctcac
     9661 cgcaacgaca acgactacgc aaacgagttg atctacattg tgcggaatgc ctgcttttaa
     9721 gaagaggata taaataagcc ctccaattaa actggcggtt gcataaagtt cgccgcgctt
     9781 caaaaggtca ggaattgtat tgctgagaat gtctgccagc aaaccaccga aagtgcccgt
     9841 tataacgccc ataacgactg cataagctga atttatgtcg ttgtgaaggg cgatctcaat
     9901 accggtggat gtgaatagac ccaggccaat agcgtctgtt ataaaaatgg ttcggataaa
     9961 ctttatagaa cttctgcgca ccagggaaac gatcataaca gcgccgatca ccagagacag
    10021 tgcgatataa tcattcaccc aacttacggg cctgataccg agaagcagat ccctgatggt
    10081 gccgccgccg tacgcagtta caaaagccag caccgcagct ccgaaaatat ccatgcggtg
    10141 ttttcgtgcc ttcaatgcgc cggtaatcgc aaaaacaaat acgcctgaat atgcaatcac
    10201 ctggactagt tccatctgaa tagttaagga acaaatataa tttaagcgac ctcagtcaca
    10261 atagatcatg ttgctgctcg tctgactcag actgctcttc gttctctttg gccgacagaa
    10321 tagccattct gtgaaaaagc agcaccatta atgcggaagg caacagaaaa attgcattaa
    10381 atgcatagct gtagccggaa agatcgattg tcccccttac gaatggcaac acgatatgca
    10441 gtaagcaaat gataagcatt aaatacgcaa aggactgggt aagcggtttt atttccttct
    10501 cgtttaaggt ggcgaatgca actatcaatg gcatgtagaa gatgagcagc gaaaaattaa
    10561 agaagagatt tgggattgcc cgtgtgagcg gtaaaaaata aaatacgctg ttaccgctta
    10621 agaaaatgat caccgcaacg tttttccagc ccggctcttc gtaataattg aatatgctta
    10681 agaggaaaga gtaacagacg aaaaacaaga tagcgatcac gattgtaatg accattctta
    10741 cgtcggtcca tctctcagat gaacggagag gcggaaaact cacagccaat gtaagcaaaa
    10801 agaatatgaa agcgatcgcg cggtatattt taaatctcat cattcggcag agcgggaatt
    10861 tactataaac aagcgattaa tgtttttctt cgtcgcatat cctgattgga ccagaattat
    10921 ttcatttttc agcaacagga aaattcgtta cttttcgaaa atcttacctt atgataactt
    10981 gcaggctgag ccgtgatgga caatttcgaa tacgcatttt aattatcaac ttctgctgaa
    11041 tgagaaacta ttttccaata atcctgttgg tttgtttggg ttgtcaaaag attgacccat
    11101 cgctccatgc tcccggcact tcatcgcata tgaaggctga ttcaacaagc cagcccaata
    11161 ttattctgat cgtagccgat gatgtaggtt acgaactact cacctgtaac ggcggcgaat
    11221 cctatgaaac gccgcacctt gatgcgatgg caaacgcggg cgtgcgatat gcaaactgcc
    11281 atggtacgcc agactgctct ccttccaggt ttatgctttt aaccggcaaa tacaatttta
    11341 gaaattacaa gcaatggggc gtgatggaca cttcgaaccg tacgatcggc aatatgttca
    11401 gggacgctgg ttactcaact tgctttgtag gaaagtggca gttggatgga tttgaaccat
    11461 ctattcatgc acttggtttt gataaatatt ctgtttggca accgtcccag gaggacagcg
    11521 caggaagccg gtacaaaagc ccgcatatat atgagaatgg agcgtattta ccggatagcg
    11581 tcaccttgaa caaatatgct gacgattggt ttaccgacta tctctcccat ttcagagaca
    11641 cggtgcggaa gccatatttt attatttatt caatgtcttt gtgccatggc ccgttttctc
    11701 caaccccgga tgataccaaa tttgcgatct ggacacccga taaacgcgga gatccgaaat
    11761 attttccttc catggtaaag tacatggata aaaaagttgg gcaaataatt gacagcaccg
    11821 acgaaaacac cgtggtgatt tttgcaggcg acaatggaag tccgcaggag atcacatcga
    11881 tttggaatgg agataccgtt gttggtgcta agaactcctt gactattttt gctacgcatg
    11941 tgccgttaat tctctaccgc aaagggtatc ccgcgcgggt tgattcgtcg cttgtcgatt
    12001 ttaccgattt tatgccgacg cttgcttcca tttcgaacat accgcttccg atcaactacg
    12061 gtatcttaga cgggacgcct ttttatccaa caagcacccg cgaatgggtt tattgttact
    12121 tcgaaccccg cccatatttg gatgcccagg ctacctgggt gcacaataaa gtatataaaa
    12181 ggtatggagc agacagcttg ctgggcccgc aaaaaaataa attgtacaac attgcactgg
    12241 acccgtacga gcaacacatt cttgggcaaa agaaacaaac acccgaggag cacgctatcg
    12301 atagtacctt caaaaagatc ctgaaaagta tgcacaacta aaagttgttt cgaaacaata
    12361 aaggtgttta t
//
LOCUS       DASQJI010000055         9013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_925315,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000055 DASQJI010000000
VERSION     DASQJI010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9013
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925315"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VEV83_01855"
     CDS             <1..792
                     /locus_tag="VEV83_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HYK43883.1"
                     /translation="LFNIKKVVAGCDAESLEEIAKVYGIVVQAGVHKTSSIKVAEAAK
                     VIENTQRDLNIALMNELSIIFDKIGINTYEVLEAAKTKWNFLSFKPGLVGGHCIGVDP
                     YYLTYKASEIGFNSRVITAGRYVNDTMGNYIAKKIIQHIIKHSNNVKEAKVLVMGATF
                     KENVADIRNSKVADIVKTLGDYYLNVDVTDPHASSEELQAEYGFSLTDNLANDYDVVI
                     IAVCHDEYNCLDENYFLSITKPYALIADLKGLYSDKIKARAYWSL"
     gene            1082..1969
                     /gene="rfbD"
                     /locus_tag="VEV83_01860"
     CDS             1082..1969
                     /gene="rfbD"
                     /locus_tag="VEV83_01860"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HYK43884.1"
                     /translation="MATSKILVSGKNGQLGKELQQLSTQFPGIEFIFLDKQGLDIAEE
                     SSVKRAFEKYSPSHFINCAAYTAVDKAETEQEAAYKTNAEAVGNIARYAYEFNTSLVH
                     VSTDYVFEGNAKNPYKETDPTNPINYYGYTKWLGEQLALQNNPNTIIIRSSWIYSSFG
                     HNFVKTMLRLMKERKEISVVNDQFGSPTYAKDLAEAILSIVNGELSVVNGEDQTSNIF
                     HFSNDGIISWYDFAVAIKNIEGLDCIIHPIATTSYPTPAKRPAFSGLDKTKISRAFGI
                     RLKNWQDSLKECLELLSSK"
     gene            2133..2465
                     /locus_tag="VEV83_01865"
     CDS             2133..2465
                     /locus_tag="VEV83_01865"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HYK43885.1"
                     /translation="MAHWLVKSEPSTYGWEHLIKDKETRWDGVRNFAARGHLKSMKKG
                     DEVFFYHSNEGMEIVGIAKVAKEFYPDPTAKEGNWLAVDLKPVKAFKRPVSLAEIKAD
                     KRLQNMAR"
     gene            2752..3183
                     /locus_tag="VEV83_01870"
     CDS             2752..3183
                     /locus_tag="VEV83_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43886.1"
                     /translation="MKTKIHAAIVIAVAASIVSCNWLIHKNEQANKSPLLTGRYEVVS
                     ITDSSLQHKLKPTDTLSSFFSSAVRDSLPRYLDFSSDSLVTYETEAKVDSTTFYTDST
                     SKVVYFKNDSTYQPFNIVAQSDSSLDLFAANDSVYISLKKL"
     gene            3244..4128
                     /locus_tag="VEV83_01875"
     CDS             3244..4128
                     /locus_tag="VEV83_01875"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HYK43887.1"
                     /translation="MKSQLYWVAFAVLSLVACSNHSSDQNAGKQESAAAEPGNQVSPK
                     QEEKQIRISDTAGTGTEPANTPAPTQTVNQDWDKKIIKTADIELKLDDYKKFNSTIHA
                     SLKQFGAYVAAEKQTENDLRIENSLTVKVPVDQFDALVNSFSGDGIKLMAKNVSTEDV
                     TGEVVDTKARLQAKMAVREKYLELLKQARNMNDILQVQSQINDIQENIEAANGRIQYL
                     QHASAYSTINLNYYQYLNGRTADDLKPDFFTKMTRAFSTGTSFLIGLFLFCVSIWPFI
                     IAGFIAWLYFKKPAIKKA"
     gene            4254..4529
                     /locus_tag="VEV83_01880"
     CDS             4254..4529
                     /locus_tag="VEV83_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43888.1"
                     /translation="MYNPKSNKRTDTEIKPAPYADAAMTDEDLTSRAEETDTEDEDFE
                     DDDLTDEADDMEDDGSFAEDDEIEEIEIEDVDDLDENIELEEDDPIE"
     gene            complement(4758..6041)
                     /locus_tag="VEV83_01885"
     CDS             complement(4758..6041)
                     /locus_tag="VEV83_01885"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HYK43889.1"
                     /translation="MSVATKSVIAVILGGGAGTRLYPLTAARSKPAVPIAGKYRLVDI
                     PISNCINSEINRIFVLTQFNSASLNKHIKNTYLFSHFSSGFVDILAAEQTPDNPGWYQ
                     GTADAVRQSLRHIRNNDFDYILILSGDQLYQMDFGAMLNDHIEKGAEISIATIPVGDR
                     EAPEFGILKTDENNHITSFIEKPKKEILPEWVSDTGQQMQQQGRNYLASMGIYIFNRK
                     LMAELLMQHHPDAADFGKEIIPASIHNHQVISYQYDGYWTDIGNIYSFFEANLALTSD
                     IPTFNLFDSARPVYTRPRMLPPAKISGTTLEKTMIAEGCIILASRLENTVMGIRSRVG
                     HGTTIVSSYLMGNDLYETIEQMDENNAMGVPRIGIGDRCYIKNAIIDKNCRIGNDVRI
                     NGGSHLENIDHSLYTIKDGIVVVKKGAILPDGFVI"
     gene            complement(6077..7498)
                     /locus_tag="VEV83_01890"
     CDS             complement(6077..7498)
                     /locus_tag="VEV83_01890"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HYK43890.1"
                     /translation="MEIIHLSAECYPVAKAGGLGDVVGALPKYQTQMGHYAKVVMPMY
                     RTKFLYQHDWIVDFKGRTNLADWWFDFTVIKEKDNTLGFDLYLIDINSLLDRENIYGY
                     SDDTQRFVAFQIAFVNWLSHWQHKPDVLHCHDYHVGLIPFMVKYCYDYNHLADIPTVL
                     TIHNAQYQGWMSWDQSRLIPRWDTWKGGLLEWNNNINPLAAAVKNAWKVTTVSWSYLD
                     ELRYNSNGLEALFEYERGKCVGILNGIDADVWDPATDKFIAVNYDADDVDEGKEETKK
                     SLCEEFNLNPEKPLVIFIGRLVGEKAADLLPDAIISSMYSMHGNVNFLVLGSGEPHVE
                     WQLRQLTQTFPGNYNAVIGYNEALSHRMYAGADFLLMPSRVEPCGLNQMYAMQYGTVP
                     MVRSTGGLRDTVTDMGDWQGWGIRFTHASIGDIVHAISRAVALYYDDRESLTRMRKHM
                     MQINNSWENSVQQYLNIYQSLKF"
     gene            7646..>9013
                     /locus_tag="VEV83_01895"
     CDS             7646..>9013
                     /locus_tag="VEV83_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK43891.1"
                     /translation="MDTNILMDDAPESSLRIAEPIKTNTGALATLVVVFFFWGFIAAS
                     NSIFIPFCKHFFHLDQFQSQLIDFAYYLAYYVGSLVLYIVGVSRGRDIMGHWGYKKGI
                     IYGLFLSVVGAVLMILSVNYGGFSAILTSLFVVALGFSLQQTAAQPFAIELGDPATGT
                     HRVNLGGGVNSFGTTIGPIIVAIALFGSTTVTDEQIASLNLDKVTILYSCVGGLFFLA
                     ALLFIFSKKLPAGTSESSIEKSNKATAVLVVMTILLIACFIPVFYSYKTIPTNDAEKH
                     ALEIYRLWWLLGSLAVIVVSLIYANRRATKNSEGWGAMKYSQLVLGMLGIFTYVGVEV
                     TIASNLGHLLEQPEFGSMPAATIAPFVSVYWGSLMIGRWAGSIPVFNPSKSMKNFLLV
                     IVPLIGFGVILAVNAIAKNDMSQLYWYIVCVFIQIAGFFISQERPATMLLLFSVFGII
                     AMVIGL"
BASE COUNT         2598 a         2005 c         1935 g         2475 t
ORIGIN      
        1 ctgttcaaca taaaaaaagt tgtcgccggt tgcgatgccg aatcgctgga agaaattgcg
       61 aaggtctatg gaatcgttgt gcaagccggc gttcataaaa cttcgtcgat aaaagttgcc
      121 gaagccgcaa aggtgatcga aaacacgcag cgcgatctga acattgcttt aatgaatgag
      181 ctttcaataa tcttcgacaa aataggaata aacacatacg aagtactgga ggcagcaaaa
      241 acaaaatgga actttctttc ctttaagcca gggcttgtag gaggacattg catcggcgtc
      301 gacccatact atctaactta caaagcatct gagataggct tcaattcgcg cgtgatcacc
      361 gccggaagat atgtgaacga cacgatgggc aattacattg cgaaaaagat cattcagcac
      421 atcatcaaac acagcaataa cgtgaaggaa gcgaaagtac tggtaatggg tgcgaccttc
      481 aaggaaaatg tggccgacat ccggaattca aaagttgctg acatcgttaa aacgcttggc
      541 gactattact tgaatgttga cgtaaccgat ccccatgctt cttccgaaga actgcaggct
      601 gaatacggtt tctcactcac cgacaatctt gcgaacgatt atgatgtcgt tatcattgct
      661 gtgtgtcatg atgaatacaa ttgtcttgac gaaaattatt ttttatcgat cacaaaaccg
      721 tacgcgctca ttgctgatct aaaagggtta tacagtgaca aaataaaggc gagggcatat
      781 tggagtttgt aaatggacgt ggacacacga gttcttccat atcgacccgt caaatttttg
      841 ttcacatctc taatccgtat tcgccacgat atcaggctaa aggcaaggta acgcgcaatc
      901 tcgtcaaccg tcatgcccga aacgcatcat gctaaatata caatcacatt gatcgggcat
      961 ctcattcaga aatgcggcaa taaatcttct tgatatattt ggactttctt gtaaagagat
     1021 ctgaggtgac gccgatgtat aacccctcgt tccttttgat gaaaacttat ttttttgttg
     1081 aatggctaca tccaaaattt tagtaagcgg taaaaatggc cagttaggaa aagagttaca
     1141 gcagttgtca acacaatttc cgggcattga atttattttt cttgacaagc aaggcctgga
     1201 tattgcagaa gaatcttccg taaaacgtgc cttcgaaaaa tattcacctt ctcacttcat
     1261 caattgcgcc gcttatactg cggttgataa agccgagaca gaacaagaag ccgcatacaa
     1321 aacgaatgcg gaggcagtcg gcaatattgc caggtacgca tacgagttca atacgagcct
     1381 ggtccatgtc tctacggatt atgttttcga aggcaatgca aagaaccctt ataaggaaac
     1441 ggaccctaca aatcccatca actactatgg ttacacaaaa tggctcggcg aacaactggc
     1501 tttacaaaat aatccgaaca cgatcatcat ccgctcgtca tggatctaca gcagcttcgg
     1561 gcacaatttt gtgaaaacga tgttgcggtt gatgaaggaa agaaaagaga tcagcgtcgt
     1621 gaacgaccag ttcggctcac caacatatgc gaaagacctg gcggaggcga tcttgtcaat
     1681 tgtgaatggt gagttgtcag tggtgaatgg ggaagatcaa acttcaaaca ttttccattt
     1741 cagtaacgac ggaatcattt catggtacga tttcgcggtt gcaataaaaa acattgaagg
     1801 acttgactgc attattcatc caattgcaac cacatcttat ccaactcctg caaaacggcc
     1861 tgccttttca ggtttggata aaacaaagat cagccgcgca ttcggcattc gattaaagaa
     1921 ctggcaagac agcctgaagg aatgcctcga attgctctcg tcaaaataat attgaaattt
     1981 tgttcgtact aaaaagtggg tatccgtgta agattgaatt cggtaaccac agcaccgctt
     2041 catctacacg attttttccg cggataaaaa agcgtaaaaa ttttatcttc acccaatagc
     2101 ctaataaacc aattaaccaa taaacatttt ttatggcaca ctggcttgta aaatcagaac
     2161 cttccacata cggctgggag catctcatca aagacaaaga aacgcgctgg gatggcgtac
     2221 gcaatttcgc cgcacgaggt catcttaaat cgatgaagaa aggagacgaa gtcttttttt
     2281 atcatagcaa cgaaggcatg gagattgtcg gcatcgcaaa agttgccaaa gagttttatc
     2341 ccgacccaac agccaaagaa ggcaactggc ttgcggttga ccttaagccg gtaaaagctt
     2401 ttaagagacc ggtatcactc gccgagataa aggcagataa acgtttgcaa aacatggcgc
     2461 ggtgagatta ggaaggttgt cggtccaacc agtttcagat gaagaatggg acatcgtaat
     2521 ggaattgggt gaaatgaaat aatttttaaa ctaacctcga aagcaaccac acatcatccg
     2581 tcacactcgc ctgatcattt tcgcgcaagt aaatttcctg gagcaatggc cgcgctgcca
     2641 acaatctttt cttttgcttt gttttaactc gtcttgctgg gttacaaaat tttttttttg
     2701 ttattaatta cttgcaggcc tgcaaaattc ttcactttca aaaatcaaaa aatgaaaacg
     2761 aaaattcatg ctgcaattgt aattgcagtt gctgcaagca ttgtgtcctg caactggcta
     2821 atacacaaaa atgaacaagc aaacaaatct ccactgctca ccggaaggta cgaagtggtt
     2881 agcattacgg actcttctct tcagcacaaa ctgaaaccaa ccgatacgct cagctcgttt
     2941 tttagttctg cggtgcgtga ttctttaccg cgatatttag atttctcctc agacagcctg
     3001 gttacttatg aaacagaagc aaaagttgat tcaacaacgt tctacactga tagcacaagc
     3061 aaagttgttt actttaaaaa tgacagcaca tatcagccgt ttaatatcgt cgcgcaatct
     3121 gatagtagcc tggatctctt cgctgcgaat gacagtgttt atatttcttt gaagaaactg
     3181 taagcacact tatgtaaaac cgtctttcag gcatcttatt tacaacaatt caaaaagttt
     3241 tttatgaagt cacaattata ttgggtggcc tttgccgtgc tttcacttgt cgcatgctca
     3301 aaccattcaa gtgaccagaa cgccggcaag caagagtcgg ccgctgcaga accaggcaac
     3361 caggtgtctc cgaaacagga ggagaagcaa atccggatct cagacacggc aggcaccggt
     3421 acggaaccgg cgaatactcc ggcaccgacg caaactgtca atcaggattg ggataaaaag
     3481 atcatcaaga ccgcagacat cgaattgaaa cttgacgatt acaaaaaatt caactcaaca
     3541 attcacgcat cgttgaaaca attcggcgct tacgtggctg cagaaaaaca aactgagaac
     3601 gatctgcgaa ttgaaaatag tttaacggtg aaagttccgg tcgatcaatt tgacgccctt
     3661 gtaaattcat tcagcggtga cgggatcaag ttaatggcga aaaatgtatc gacagaagat
     3721 gtaaccggtg aagtggttga tacgaaagcg cggctccagg cgaagatggc tgtccgcgaa
     3781 aaatacctgg agcttttgaa acaggcgagg aatatgaatg atattttgca ggtacagagc
     3841 cagatcaacg acatccagga aaacatcgaa gcggcgaatg gcaggataca ataccttcaa
     3901 cacgcttctg cgtacagcac catcaatctt aattattacc agtacctgaa tggtcgtacc
     3961 gcagatgatc tgaagcccga cttttttact aagatgacaa gagctttttc aactggcacc
     4021 tcttttctta ttggcctgtt tttattctgt gtcagcatct ggccatttat catcgccggg
     4081 ttcatcgcat ggctttattt taaaaaaccg gcaataaaaa aagcatagtg gctccatttc
     4141 aaaggagttg atcattttat ctgtaagcag cagttcacaa aaagaattta tcgttaagtt
     4201 tcgggtgtaa aaaattatgg cttgctaatt gcgtttgatg taagaaacgt tttatgtaca
     4261 atccgaaatc aaacaaaaga accgacaccg aaataaagcc ggctccttat gcagatgcgg
     4321 cgatgaccga tgaagactta acatcccggg cagaagaaac agatacggaa gatgaagact
     4381 tcgaagacga tgatctcacc gatgaagcgg atgacatgga agatgatggg tctttcgcgg
     4441 aagatgatga aattgaagaa atagaaattg aagatgtcga tgatcttgac gaaaacattg
     4501 agctggaaga agatgacccg atagagtaaa atttaaactg tgcaaagccg ttcaagtcgg
     4561 cgagtataac cgaagcaatg ataaagacgg catgaattgg cgcccgcaat taagtttctg
     4621 ttatttgtcc ggctcctttt cattggctgc aactcgaata ttgcatcacc ggagatgaaa
     4681 gcagcaaaac gcgcggcatg taaaaataat gctggcgata gtgaattcat tagaagcttt
     4741 ccgtcgccag cattcattta tatcacgaaa ccgtcaggaa ggatcgcacc ctttttcaca
     4801 accacgatcc catcctttat tgtgtagagt gaatgatcaa tattttccag gtgactgcca
     4861 ccatttattc tcacatcatt tcctatcctg cagttcttgt caatgatcgc gttctttata
     4921 taacagcggt cgccaattcc aatgcgcgga acacccatcg cattattttc gtccatctgt
     4981 tcgatcgttt catagaggtc gttccccatc aggtagctgc taacaatcgt cgtgccgtgg
     5041 ccaacgcgtg agcgaatccc catgaccgta ttttcaagcc tgcttgcgag aatgatacat
     5101 ccttctgcta tcattgtttt ttcgagcgtg gtgccgctga tcttggcagg cggcaacatg
     5161 cgtggacgcg tataaaccgg tcttgcactg tcaaacaaat tgaacgtagg aatgtctgac
     5221 gttaatgcaa gattcgcttc aaagaaggag taaatatttc cgatgtctgt ccagtagccg
     5281 tcatactggt aactgatcac ctggtgattg tggatcgatg ccggtattat ttccttaccg
     5341 aaatccgcag cgtcgggatg atgctgcatc aggagttcgg ccatcagctt gcgattgaaa
     5401 atataaatgc ccatcgacgc aagataattt ctcccctgtt gctgcatctg ctgccctgta
     5461 tcgctcaccc attcgggtaa aatttctttc ttgggttttt cgataaatga agtgatatga
     5521 ttgttctcat ccgtcttcaa aattccaaac tcgggtgctt ccctgtcgcc aaccggtatc
     5581 gtcgcaatcg atatctcagc acctttctca atatgatcat tcagcattgc gccaaaatcc
     5641 atttgataca actggtcgcc gcttaagatc agtatgtaat cgaaatcgtt attcctgata
     5701 tgccgcaatg attgacgaac tgcatccgca gtgccctggt accagcccgg gttatcgggt
     5761 gtttgttcgg ccgcaagaat atcgacgaag ccagaactga aatggctgaa gaggtaagtg
     5821 ttctttatgt gtttgtttaa cgacgctgaa ttgaattgcg ttaaaacaaa tattcgattg
     5881 atctctgaat ttatgcaatt actgatcggg atgtcaacca aacgatattt gcccgcgata
     5941 ggaacagccg gctttgaacg tgctgcagtt aaaggatata agcgcgtgcc tgctcctcct
     6001 cccaatatta ccgcgatcac agactttgtt gctaccgaca tatgttcaaa tttattttga
     6061 aaatttatca ctaaagctaa aactttaagc tctgataaat atttaaatat tgctgcacag
     6121 aattttccca gctgttgttt atctgcatca tatgcttgcg catccgagtc aatgattctc
     6181 tatcatcata atacaatgcc acagctctgc tgatcgcatg cacaatgtcc ccaatgctgg
     6241 catgcgtaaa ccgaattccc cagccctgcc agtcgcccat gtccgtgacg gtatccctca
     6301 gcccgccggt acttcgcacc atgggcaccg tgccatattg catcgcatac atttgattca
     6361 gtccgcacgg ctcaacacga ctcggcatta acaggaaatc tgcgcccgca tacatacgat
     6421 gactcagcgc ttcgttataa ccgatcacgg cgttatagtt tcctggaaat gtttgtgtga
     6481 gttggcgcag ttgccattca acgtggggct ctccgctgcc gagcacaaga aaattcacat
     6541 tgccatgcat ggagtacatg gaagaaatga tagcatcagg cagaaggtcc gcagcttttt
     6601 cgccaaccaa tcttccgata aaaataacaa gaggtttttc aggattcaga ttgaactctt
     6661 cacataaact ttttttcgtt tcctctttac cttcatccac gtcgtcggca tcataattta
     6721 cggcaataaa cttatcagtc gccgggtccc aaacatcggc atcaattccg tttagtatac
     6781 caacacactt tcctctttcg tattcaaaca acgcttcaag tccgttcgag ttgtaacgca
     6841 gttcatcgag ataactccag ctcacggtgg tgactttcca cgcattcttt acggcagccg
     6901 cgagcgggtt aatattatta ttccattcga gtaaacctcc tttccatgta tcccagcgcg
     6961 gaatcagtcg gctctggtcc caactcatcc agccctgata ctgcgcatta tgaatcgtga
     7021 gcactgttgg aatatccgca aggtgattgt agtcgtagca atattttacc atgaaaggaa
     7081 taaggccaac atgataatcg tggcagtgca aaacgtccgg cttatgttgc cagtggctga
     7141 gccagtttac aaatgcaatt tgaaacgcaa cgaaacgttg tgtgtcgtcg ctatatccat
     7201 aaatattttc gcggtcgagc aggctattga tgtcgatcag gtaaagatcg aagccaagcg
     7261 tattatcttt ttctttgatg accgtaaaat caaaccacca gtctgcaagg ttcgtccttc
     7321 ccttaaaatc aacaatccaa tcgtgttggt ataaaaattt tgtcctgtac atgggcatca
     7381 caacttttgc gtaatggccc atttgtgttt gatactttgg aagcgcgcca acaacatcac
     7441 ctaaaccacc ggccttcgca accgggtaac attccgcact caggtgaatt atttccatgc
     7501 aataagtaat ggatttatga acagagaaat tcggttatca aattaacgac aatatgaaaa
     7561 ctattttaaa aatttttaga aagataaaat gtgattactt ttaaacgtca tttcattcct
     7621 tcaataaaat aacgatgagc cagcaatgga tacaaacatc ttaatggacg atgctcccga
     7681 atcaagtttg cggatagcag agccaatcaa aaccaacacc ggcgcgcttg ccactttagt
     7741 agtcgtattt tttttctggg gatttatagc agcaagtaac agtattttca ttcccttctg
     7801 caaacacttt tttcacctgg accaatttca gtcacagctg atagactttg cctactatct
     7861 tgcttattat gtgggctcgc tcgttttata tattgttggt gttagcaggg gaagagatat
     7921 aatgggacac tggggctata aaaaagggat catttatggt ttgtttctct cggtggttgg
     7981 tgcggtgcta atgatcttat ctgtgaatta tggcggcttc tctgctattc tcacatcatt
     8041 gtttgttgtc gcactcggct tttcccttca acagaccgcc gcgcaacctt ttgcgattga
     8101 gttgggcgat cctgccaccg gaacacatcg cgtgaatctt ggaggtggag taaattcttt
     8161 cggaacgacg atcggcccga tcatcgttgc gattgctttg tttggatcga cgactgttac
     8221 ggatgaacag atcgcatcct tgaacctcga taaagtaaca attttataca gctgcgttgg
     8281 cggactgttt tttctcgccg cgttgttgtt tattttttcg aaaaaattac ctgcaggaac
     8341 gtctgagtcg tctatcgaaa aatcaaacaa ggcaactgcg gtgctggtcg tcatgacaat
     8401 tttgttgata gcatgtttca tccccgtctt ctacagttac aaaacaatac ccacgaacga
     8461 cgccgagaaa catgcgctcg aaatttacag gttgtggtgg ctgctcggct cccttgccgt
     8521 aattgttgtg agcttgattt atgccaacag gcgtgccacg aaaaacagcg aagggtgggg
     8581 cgcgatgaaa tattcacaac ttgtgctcgg aatgctcggc atatttactt atgtgggtgt
     8641 agaagttact attgccagca accttgggca tttactggag caacccgagt ttggaagtat
     8701 gcccgcagcg actatagcgc cgtttgtatc cgtatactgg ggcagtttga tgattggcag
     8761 atgggcgggt tcgatacctg tcttcaatcc gtcaaagtcg atgaagaatt tcctgcttgt
     8821 gatcgtgcca ctgatagggt tcggcgtaat cctggccgtg aatgcaattg cgaaaaatga
     8881 tatgtcgcaa ttatactggt acattgtctg cgtcttcatc cagatcgcag gattttttat
     8941 ttcgcaagaa aggcccgcga caatgcttct ccttttctcg gtctttggta ttattgctat
     9001 ggtgatcggg tta
//
LOCUS       DASQJI010000056         2669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_925338,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000056 DASQJI010000000
VERSION     DASQJI010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925338"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="VEV83_01900"
     CDS             complement(<1..1145)
                     /locus_tag="VEV83_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HYK43892.1"
                     /translation="MDTVIEEEVKSKRKKKTFSFIVIAIAILVLAIWLVRTSFASSLQ
                     KSNITTAVVERGDIENTISASGEILPEFEEVITSPINASIQNVLMDAGNKVEPGQSIL
                     TLDKSTSQTEYEKEKFELESKRNDIQKLKLELAKSFYDIQSNNNIKQLRINSLQADVE
                     NAKRLYKAGGGTKEDVDKAELDLKVALLEKQQLENEIKTKQQTMQVQIRESEIAAAIQ
                     QNDLHALERKLNAANIVATRAGVVTWVNKNIGVSVHEGESLARIADLSSFKVTGSISD
                     NYLDQLHNGMTAIIRINETQIRGTVSNIYPSVQNGIVSFDIQLNEQDNKLLRPNMKVD
                     VYLVTASHGNVLRVANGPAFRGASSQDIFVLNNGKAERRSVHIGMTN"
     gene            1282..2334
                     /locus_tag="VEV83_01905"
     CDS             1282..2334
                     /locus_tag="VEV83_01905"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding domain-containing
                     protein"
                     /protein_id="HYK43893.1"
                     /translation="MKKPAGLYKTIRIARVNEEVRDFKTFAFADDHNITYKPGQYITL
                     VYHSRNVEVRRSYSITSTPVLNEPLSIGVKRIENGLLSRQLVDTAMIGDELITIGSGG
                     LFILPDDIENYKQIFFFAAGSGITPIYSLIKTALYAHPHLSLVLIYSNASPEKTIFLH
                     HLKDLQETFPFRFHIEFLFSNILELSRARLHRDLLLEFLAGYAVSDPTEILFYICGPE
                     SYMRMCTYTLREHDVPNDNIKREDFAINAIRKRDASPPDKNAHKVFIQFNRQEIDIIV
                     NYPDSILQSAKKQGIVLPYSCEAGRCGSCVAKCVKGTVWHSYNEVLTEKELQQGLVLT
                     CVGHPVGGDVELRIDV"
     gene            complement(2478..>2669)
                     /locus_tag="VEV83_01910"
     CDS             complement(2478..>2669)
                     /locus_tag="VEV83_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HYK43894.1"
                     /translation="LFFEDHSGDILQDDVISRLLTFKNVLITSHQAFLTDTAIKNIAE
                     TTIYNLDCFENNVACENEL"
BASE COUNT          716 a          560 c          599 g          794 t
ORIGIN      
        1 aagtttgtca tgccgatatg cacacttctt ctttctgctt ttccattatt caatacaaat
       61 atgtcctgtg aagaagcgcc tctgaatgcc gggccattcg caacccgcag cacattgcca
      121 tgcgaagcag tgaccaggta cacatccact ttcatattcg gtcgtaataa cttattgtct
      181 tgttcgttga gctggatatc gaaggagacg ataccatttt gaactgaagg ataaatatta
      241 gaaacggtac cccggatctg cgtttcattg atgcggatga tggccgtcat accgttgtgc
      301 aattgatcca ggtaattatc tgaaatgctt ccggtgactt tgaaactact caaatcggca
      361 atgcgtgcga gggattcgcc ttcgtgcaca gacacaccga tatttttgtt cacccaggtc
      421 acaacaccgg cgcgggttgc aactatgttt gccgcattca gtttgcgttc gagtgcatgc
      481 agatcgtttt gctgtatagc agcggcgatc tccgattcgc gtatctgcac ctgcatggtt
      541 tgctgttttg tttttatttc gttctccagt tgttgctttt cgagcagggc aaccttcaaa
      601 tcgagttccg ctttgtcgac atcctctttg gttccgcctc cggctttata taaacgcttc
      661 gcattttcta cgtcggcctg aagactgttg atacgcagtt gttttatgtt attgtttgac
      721 tgtatgtcgt aaaagctttt ggccaattcg agcttcaatt tttgtatgtc attacgtttc
      781 gattcgagct caaatttttc tttctcgtat tctgtttgcg acgtggactt atcgagcgtt
      841 aagatcgatt gtccaggctc caccttgttg cctgcatcca ttaacacgtt ttgaatggaa
      901 gcatttatcg ggctcgtgat gacctcttcg aactccggta aaatttctcc gctggcactg
      961 atggtatttt caatatcacc tctctcaacc acggcggtcg tgatattaga tttttgcagg
     1021 gacgatgcga atgaagtgcg gacgagccaa atagccagga caagaatggc aatggcaatc
     1081 acaataaaag aaaaggtttt cttttttctc ttcgacttaa cttcttcttc gatcactgtg
     1141 tccattatat aattttgctc atttattttc caatacggat gccaaagcga aaacgttaga
     1201 aataagcgag ttatcaaaat ttctttttaa aaaattgtcc ggtatcggac aaaacgtttg
     1261 agaacggaat aattttaagc gatgaagaag ccggctggat tatacaagac aattcgcatc
     1321 gcacgcgtca acgaggaagt aagggatttc aaaacgttcg cctttgctga tgaccataac
     1381 atcacgtaca aacccgggca atatataacg ctggtttacc attcgcgcaa cgtggaagta
     1441 agacggtctt attcgatcac gtcaactccc gtcttaaacg aacctttatc gatcggcgtt
     1501 aagcgaattg aaaacggatt gttatcaaga cagttggttg acacagcaat gattggcgat
     1561 gaactaataa ccattggcag cggcgggctt tttattttac cggatgatat tgagaattac
     1621 aaacagatct ttttcttcgc ggcaggcagt ggcattacgc ccatttattc cctgatcaag
     1681 acagctttgt atgcgcatcc tcatttgtca ctcgttctca tttatagtaa tgcctcaccg
     1741 gaaaaaacaa ttttcctgca tcacttaaaa gatctgcagg aaacatttcc gtttcgtttt
     1801 cacatagagt ttttattcag taatattctt gagctgtcaa gagcacgatt gcacagggac
     1861 ttgttgttag agtttttggc tggatatgcg gtgtctgatc ccacagaaat tttgttttac
     1921 atatgcggcc cggagtcata catgcgcatg tgcacataca cgttgcgtga acatgatgtg
     1981 ccgaacgata atataaagcg cgaggatttt gcgatcaatg ctattaggaa aagagatgca
     2041 tcgccgcctg ataaaaatgc acacaaggta tttattcaat ttaaccgcca ggaaattgat
     2101 atcatcgtca attacccgga ttctattttg cagtccgcaa aaaaacaggg aatcgttttg
     2161 ccttacagtt gtgaagcggg ccgctgcggc agttgcgtgg cgaaatgtgt gaagggaaca
     2221 gtctggcatt cgtataatga agtgctcacc gaaaaagaat tacagcaggg attggtgtta
     2281 acgtgtgtgg ggcatccggt agggggtgat gttgagttga ggattgatgt gtgagaaaat
     2341 ggaacacgga tcagacggat gagacggttt tagagggatc ttattttaaa acaaaatgaa
     2401 gagggaaggt caaaagtggg cagcaaggaa atccgtgaag atccgtgccc gcaggccgtg
     2461 tcatccgtgt tccatcatca caactcgttt tcgcacgcaa cattgttttc aaaacaatcc
     2521 aaattataaa tcgtagtctc ggcgatattt ttaatagcgg tatcagtaag aaaagcctgg
     2581 tggcttgtga tcagtacatt cttaaaagtc agcaatcgcg aaatcacatc atcctgcaaa
     2641 atatctccgg aatggtcctc gaaaaaaag
//
LOCUS       DASQJI010000057         2971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_157531,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000057 DASQJI010000000
VERSION     DASQJI010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157531"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..707
                     /locus_tag="VEV83_01915"
     CDS             <1..707
                     /locus_tag="VEV83_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43895.1"
                     /translation="QSDFTVIVKDRAIDTLIGCTIAFIVSLFVLPVWEEQQTPLMIEA
                     ALGANHLYFNVVASLFLQKAFTREEYNAARKKAFVALANLNDNFQKMLSEPRSKQQNM
                     EHYHQFVASSYMLTVHIATLSSLFARAPDNFRRNDLEPLVHNINAKFKRATHLVQHRV
                     DKPVTSKRAPITNKVQALLHQRQQEIESGFKEVQSDARVTLRELKSITDEFETIDSIV
                     GDEIRILKVVIERIKR"
     gene            complement(837..1046)
                     /locus_tag="VEV83_01920"
     CDS             complement(837..1046)
                     /locus_tag="VEV83_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HYK43896.1"
                     /translation="MDNLELKGNWNVFKGKLKQTYGDLTDDDLRYEEGKEDELWGRLQ
                     NKTGRTREQLTRWLNGKDERDRNRI"
     gene            complement(1172..2497)
                     /locus_tag="VEV83_01925"
     CDS             complement(1172..2497)
                     /locus_tag="VEV83_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HYK43897.1"
                     /translation="MQFFFQAAFILVTIIAVFLFSKKIKELRRNILLGRDESISGDTS
                     ERWKSVLLIAFGQKKMFRNPLVAVIHFVIYAGFIIINIEVLEIVIDGLFGTHRVFAQP
                     LGRSYPWLINSFEVLAVGVLTACIIFLARRNLIYVRRLWMKELNGWPKSDANYILITE
                     ILLMTFFLTMNSADTVLQQRGFGEYARHQTGNFIASALIHPLFSNMSSGSLMALERTC
                     WWLHILGIFAFLNYLPYSKHLHILFAFPNTYYARLQPKGKIDNMPEIQKEVLFAMQPE
                     TAATEAAADGQKRFGAKDIFDLSWKNLLDAYSCTECGRCTAACPANITGKVLSPRLIM
                     MKTRDRAEEVGRNINANKEFKDDGRTLLHTYVTEEELRACTTCQACVEECPVSINPLD
                     IILQLRRYLIMEESNAPQEWNAMFSNIENNFAPWKFSPDERDKWAEEMT"
     gene            2577..>2971
                     /locus_tag="VEV83_01930"
     CDS             2577..>2971
                     /locus_tag="VEV83_01930"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HYK43898.1"
                     /translation="MSKRRIILSSDVAAEKLHRMALEVAEQLSDESTELVVIGIEGAG
                     KFGTKGAGRFIASKIEGYLRQYLSCSITLVSLHMDKHAPSVITLTEEINFDDKNVLLI
                     DDVSNSGKTLLYALKPLMRFQPKRIQILVL"
BASE COUNT          839 a          642 c          663 g          827 t
ORIGIN      
        1 atcaatccga cttcacggta atcgttaagg atcgtgcgat tgataccctg atcggatgca
       61 caattgcttt tattgtttct ttattcgttt tgcctgtgtg ggaagagcag caaacgcctt
      121 taatgatcga agcggcactg ggggcaaatc acttatattt caatgtagtg gcttccctat
      181 tcctgcaaaa ggcattcacc cgtgaggaat acaacgctgc acggaaaaag gcattcgtgg
      241 cgcttgcgaa tctcaacgac aactttcaga aaatgctttc ggaaccacga agtaagcagc
      301 agaacatgga acattaccat caattcgtgg cgagcagtta catgctaacg gtgcatatag
      361 caacgctttc ttctctgttc gcacgcgcac cggataattt tagacgaaat gatcttgagc
      421 cgttggttca caacatcaat gcgaaattta aaagggcgac tcatctcgtg cagcatcgcg
      481 ttgacaagcc ggtcacttca aagcgtgcgc ccataacaaa taaggtgcag gctttgctgc
      541 accagaggca acaggagatc gaatcgggat ttaaagaagt gcaatctgat gcccgggtaa
      601 cgttacgtga attaaaaagc atcaccgatg aatttgaaac tatcgacagt attgtaggcg
      661 atgagataag aatcctgaaa gtggtgatcg aaagaataaa gagatgagtg atcaatgatg
      721 agtaatgagt gatgagtaga gcacgaccac aacacggctt tcgaataagt ttttcaacgg
      781 ctcatcgtgc gagaaaatta aaaaaaaaag ccggcgttgg ccggcccttt atgaagttaa
      841 atccgattcc tgtctctttc atcttttcca ttcaaccacc ttgttaattg ttcgcgggtc
      901 ctgcctgttt tgttttgcag ccgtccccac agttcgtctt cctttccttc ctcgtacctc
      961 agatcatcgt ctgtaagatc accataagtc tgtttcaatt tacctttgaa gacgttccag
     1021 tttcccttta attctaagtt gtccataaaa actgattttg ggtttaacaa tacaatattt
     1081 gtttccataa ttgtaccaaa cggcctttgg aaaaaaatat taacggggaa aagtatcagc
     1141 cacgaagaag aagagcacaa aagaggcaac tttatgtcat ctcttcggcc catttatccc
     1201 tttcgtcggg ggagaatttc cagggagcga agttattttc gatgttgctg aacatcgcat
     1261 tccattcctg cggcgcatta ctttcttcca tgatcagata cctgcgcaat tgcaaaataa
     1321 tatccagcgg gtttatgcta acgggacatt cttccacaca agcctggcaa gtggtgcatg
     1381 cgcgcagttc ttcttcggta acgtaagtat ggagtaaggt tctaccgtcg tctttgaatt
     1441 ctttgttcgc attgatattc ctgcccactt cttccgccct gtctctcgtt ttcatcatga
     1501 tcagcctcgg gcttaaaact ttaccggtaa tatttgcggg gcaggcagcc gtgcatcttc
     1561 cacattctgt gcaactgtac gcatccagca aatttttcca actcagatca aaaatgtctt
     1621 ttgcgccgaa tcttttttgt ccatcggctg ccgcttctgt ggccgcggtt tcaggttgca
     1681 ttgcgaacaa gacctctttt tgaatttcgg gcatgttgtc gatcttgcct tttggctgga
     1741 gccgtgcata atatgtattg ggaaatgcaa aaagtatgtg caggtgttta gaataaggaa
     1801 gataatttag aaatgcaaaa attccgagga tgtgcaacca ccagcatgtc cgctccaggg
     1861 ccatgagaga accgctactc atgtttgaaa atagtggatg gatcaaagca gaggcaataa
     1921 agttcccggt ttgatgacgt gcatattcgc caaagccacg ctgttgcagc actgtatctg
     1981 cagaattcat agtcagaaag aaagtcatca aaagtatctc ggtgatcagg atatagttgg
     2041 cgtcgctttt tggccagcca ttgagctctt tcatccataa acgccgcaca taaattagat
     2101 ttcttctcgc caaaaagata atgcaggcgg tcaaaactcc tactgccaac acttcgaacg
     2161 aattaatgag ccagggatac gatcgaccaa gtggttgagc gaagacgcga tgagtaccga
     2221 agagcccgtc tatcacgatc tcgagcactt cgatattaat aattatgaaa ccggcgtaga
     2281 tcacgaagtg tatcacagca acaagtgggt tgcgaaacat tttcttttgt ccgaacgcga
     2341 tcagtaatac acttttccat cgttccgatg tatcaccact gatgctttca tctctgccga
     2401 gcaagatatt tcttctgagc tcttttatct ttttgctgaa aagaaacacc gcaatgatgg
     2461 taacaagtat aaaggctgcc tggaaaaaaa actgcatagt gttttatgtg ttgcgaagat
     2521 aaagttttga cttcaagctg ttatttaaaa agctgatgtc ttacatttga aaaactatga
     2581 gtaaaaggag aataatactc agttcagatg tggccgctga gaaactacat cgcatggcgt
     2641 tggaagtcgc ggaacaactg agcgatgaaa gtacggagct ggtagtgatc ggcattgaag
     2701 gagcgggaaa attcggaacg aagggtgcgg gaagatttat tgcttctaaa atagaaggtt
     2761 atttacggca gtatttgtcg tgttccataa cactggtctc gctgcacatg gataagcacg
     2821 caccatctgt cattacgctg actgaagaaa tcaattttga cgacaagaat gttttgctga
     2881 tcgatgacgt tagcaacagc ggcaaaacgc tgttgtatgc cttgaagccg cttatgcgat
     2941 ttcagccaaa acggattcaa atactcgtac t
//
LOCUS       DASQJI010000058         6366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1539756,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000058 DASQJI010000000
VERSION     DASQJI010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6366
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539756"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VEV83_01935"
     CDS             <1..309
                     /locus_tag="VEV83_01935"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HYK43899.1"
                     /translation="TKNPALQTNPDLKLFIITNENPEIQLQQVLHHFNLKNFQPFSRC
                     IVCNGLIKPVEKEDIALRLQPNTAKYFDEFWQCENCKGVYWKGSHYERMRKWELGIRN
                     "
     gene            515..1003
                     /locus_tag="VEV83_01940"
     CDS             515..1003
                     /locus_tag="VEV83_01940"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HYK43900.1"
                     /translation="MKNKFLNGKKIPAVFLSLIFTAVLIGSCNKDDEDNNNNQPYNIS
                     GNANGMQVVPSNAATGTGTITGTFDPSTNTLTYTSTWTGLSGAPSSAGFYVGASGVAG
                     TVVGEPWTLDTTMTTDGTVSSSVVLTADQASQLLAGNMYYSYYTATYPGGEIRGQITA
                     TR"
     gene            complement(1124..3100)
                     /gene="gyrB"
                     /locus_tag="VEV83_01945"
     CDS             complement(1124..3100)
                     /gene="gyrB"
                     /locus_tag="VEV83_01945"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HYK43901.1"
                     /translation="MNEEQVNPTPQEGNYGAESIQVLEGLEAVRKRPAMYIGDLSVKG
                     LHHLVYEVVDNSIDEALAGYCKNISVTIHEDNSVSVIDDGRGIPTGIMAKEQRSALEV
                     VMTVLHAGGKFDKNTYKVSGGLHGVGVSCVNALSTHLHVTVQREGKIFEQEYRAGVPQ
                     YSVREIGVSSSTGTKIHFWPDHTIFQTITYNKDILEGRLRELSYLNKRVRITLTDLRE
                     KDDAGNYYSKVFYSEGGIVEFVEMLDKSGKRNSLLPKTLYIEGLDEASNVAVEVALTY
                     NDDFKEHIFSYVNNINTIEGGTHVSGFRTAITRVFKTYGDKNGLFEKAKVEVEGDDFR
                     EGMSAIVSVKVPEPQFEGQTKTKLGNSEVSGVVQTTVSRVLEAYLEENPKEAKNIISK
                     VIIAAQARVAARKARELVQRKTVLSGGGLPGKLADCSERNAEKCELFLVEGDSAGGTA
                     KQGRDRSYQAILPLRGKILNVEKAMEHKIYENEEIRNIFTAMGVTIGTAEDPKALNIT
                     KLRYHKLIIMTDADVDGSHIATLILTFIFRYMKELVDQGYVYIAQPPLYLVKRGKEQE
                     YAFDEDQRKLLIEKLSNGKEDGVHIQRYKGLGEMNADQLWETTMDPSRRTLRKVTIES
                     LANADEVFSMLMGDEVAPRRLFIESHAKYAKIDV"
     gene            complement(3294..4154)
                     /locus_tag="VEV83_01950"
     CDS             complement(3294..4154)
                     /locus_tag="VEV83_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK43902.1"
                     /translation="MDTKQTPFPPQKQNLPGSEQEMKPRPVTDNPNYKPTGKLKDKVA
                     LITGGDSGIGKAVAILFAKEGAKVVIVYLSEEQEDADDTKKIVEKYGGTLLQIPGDVS
                     REEFCKDAVQKTVDEFGRIDILVNNAAQQIPAENIEEIETKNLVHTFEVNIFSMFWLT
                     KAALKHMAEGSVIINTTSVTAYKGSPELLDYSATKGAITAFTRSLSQNLVKKGIRVNG
                     VAPGPIWTPLIPASFDEKRTSEHGKNAPMKRAGEPVEVAYSYLFLATEESSYFTGQIL
                     HPNGGTVVNA"
     gene            complement(4361..4771)
                     /locus_tag="VEV83_01955"
     CDS             complement(4361..4771)
                     /locus_tag="VEV83_01955"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK43903.1"
                     /translation="MTDTLQTLAVETNFQKIILLVDDDEDEHDIFLSALNGTGEDCTL
                     ISAISSDEALNILRTVTPDVIFLDINMPRITGIKCLEEIRKIKSLAHIPVYIYSTGIN
                     SREGQKAILLGAKDYIIKPNSINDLSSVLKDILQ"
     gene            complement(4975..>6366)
                     /locus_tag="VEV83_01960"
     CDS             complement(4975..>6366)
                     /locus_tag="VEV83_01960"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK43904.1"
                     /translation="HHHKWAKKARQGEAKYQDYFYMYPDRTIPDEFEKAMPEIFPESA
                     PGNFTYITECDKWVMTVFHNYQWDLNYTNPQVCVEMLENIFFYANLGVDMLRIDAPAF
                     IWKQVGTTCQNLPRAHTILQLIKQCTNTATPGMALLAEAIVEPAEIMKYFGTGLATAK
                     ECDFAYNATQMALQWDALATGDTRVMLAAQPELSRKPYGTSWITYTRCHDDIGLGYND
                     YMIEQAGFNAFEHRKFLMQYYSGNYNDSPARGALFSANAKTLDARISGSLASLCGLEK
                     ALLDNDENEIDTAISRILMMQAHTFFIGGIPMIFYGDEAGYTNDYSYLLDAGKSYDNR
                     WMHRPIIEWEKNKKIEEEETVENKIFTSTQRLIALRKKFSVIADHKNLTWLPPHNLHV
                     AGYIRTGKHHELYCLFNFSKQKAFLTWYIFKQHGHTPQHVYDHWQELQHVVGADDEYL
                     TLEPYQFCLLEPA"
BASE COUNT         1591 a         1484 c         1403 g         1888 t
ORIGIN      
        1 acaaaaaatc cggcgcttca aacgaacccg gatctcaaac tttttatcat cactaacgaa
       61 aatccggaaa tacaacttca acaagttctt catcatttca atctcaaaaa ctttcagcca
      121 ttttcaagat gtattgtgtg caatggttta ataaaacctg tggagaaaga agacatcgca
      181 ttacggttgc aacccaacac tgcgaaatat tttgatgagt tctggcaatg cgaaaactgc
      241 aagggggttt attggaaagg ctctcattat gaaaggatgc gaaagtggga attaggaatc
      301 aggaattagg aattaggatc acatcaaaga tcagagatca gacattacga tttacaatct
      361 caaattgaca actcacaact cgccccaccg ctgcctgctt aaccggcaat ttctcattcc
      421 gttcacaaat tattgcagaa ccgattagtt aagggcatgc aaattggttg taggttttct
      481 ttaatttatt ccccaactaa aaaacagagc ttttatgaaa aacaagttcc tgaacggaaa
      541 aaaaattccc gctgtcttcc tgtctttaat ttttactgcg gtgctgatag gcagttgcaa
      601 caaagatgat gaggataata acaacaacca gccctataac atcagtggca atgcaaacgg
      661 catgcaggta gttccttcaa acgctgcaac gggtaccgga actataacag gcacattcga
      721 tccttccact aacacgctca cctacacttc cacctggacc ggtctttccg gtgcgccgtc
      781 atcagccgga ttttatgttg gtgcttcagg tgttgcagga actgttgttg gtgaaccgtg
      841 gaccctcgac acaacaatga ccaccgatgg aaccgtcagc agcagtgtag tactcaccgc
      901 tgaccaggca tctcagttgc ttgcaggcaa catgtattat tcatattaca cggctactta
      961 tccgggtggt gagattagag gacagataac ggcgacgcga tgattaccgt ttattaatgc
     1021 gagaaaaagt aggagaacta cggttaaagc ataaccacaa acgtcttagc gtataaatgt
     1081 tgatcactca aacctgccag gaaactggca ggttgttttt ggatcatacg tcgatcttcg
     1141 catatttcgc atggctctcg atgaataagc ggcgaggcgc tacttcatcc cccattaaca
     1201 tgctgaagac ttcatctgca ttggcaagac tttcaattgt aacctttcta agcgtgcggc
     1261 ggctggggtc cattgtcgtt tcccataact ggtctgcatt catttcgccg agccctttat
     1321 agcgttgaat gtgcacgccg tcttcttttc cattgctcaa tttttcaatg agcaatttcc
     1381 gttggtcttc atcaaaagca tattcctgtt ccttgcctct ttttacgagg tataaaggcg
     1441 gttgggcgat gtaaacatat ccttggtcaa ccaactcttt catgtatctg aaaatgaaag
     1501 tgagtatcag cgttgcgata tgcgacccgt ccacatcagc atccgtcata atgataagct
     1561 tgtggtaacg aagctttgta atgtttagcg ctttcgggtc ctcagcagtg ccaattgtta
     1621 cacccatcgc ggtgaaaata tttcgtattt cttcgttctc atagatctta tgctccattg
     1681 ccttttctac gttaagaatt ttgccacgga gcggaagtat tgcctggtaa cttctgtctc
     1741 ttccctgttt tgcggtgccg ccggcgctat cgccctcaac taaaaacaat tcgcatttct
     1801 ccgcattgcg ctcactgcag tcggcgagct taccgggcaa accgccgccg ctcaaaaccg
     1861 ttttgcgttg cacgagctca cgcgccttgc gcgcggcgac ccgtgcctgc gccgcgatga
     1921 taaccttact gattatattc ttcgcctcct tcggattctc ttcgagatat gcttcaagca
     1981 cacgggaaac tgttgtttga acaacgccac tcacctcact gttgcccaac tttgtttttg
     2041 tttgtccttc aaactgtggc tcgggaactt tcaccgacac gatcgcactc atcccttcgc
     2101 gaaaatcatc gccttccact tcaacttttg ccttttcaaa caagccattc ttgtcgccat
     2161 acgttttaaa cacccgcgtg attgccgttc taaagccgct cacatgggtt ccgccttcaa
     2221 tcgtgttaat attatttacg taggaaaaaa tgtgctcttt aaaatcatcg ttgtaagtga
     2281 gcgcaacctc aacagcaaca ttcgatgctt catcgaggcc ttctatatac agggtctttg
     2341 gaagcagtga atttctttta ccgcttttgt cgagcatttc aacgaattca acgattccgc
     2401 cttcgctgta aaatactttg ctgtaataat ttcccgcatc gtctttctca cgcaggtcgg
     2461 tcagcgtgat ccttactctt ttgttcaaat agcttaattc acgcaggcgg ccttcgagga
     2521 tgtccttgtt ataagttatt gtttgaaata tggtatgatc aggccagaaa tgaatcttgg
     2581 tcccggttga ggatgagacc ccgatctcac gcaccgagta ttgcggtacg ccagcccggt
     2641 actcctgttc aaagatcttc ccttcgcgtt gcacggttac atgcaggtgc gtacttagcg
     2701 catttacgca actcactcca acgccatgca ggccacccga cactttgtag gtgttcttat
     2761 cgaattttcc acccgcatgc aacacggtca ttaccacctc cagcgcgctg cgctgttctt
     2821 ttgccatgat gcctgtggga atgccacggc catcgtcgat cacgctcacg ctattgtctt
     2881 catggatcgt aactgaaata ttcttacaat agccggctaa ggcttcgtcg atggagttat
     2941 ctactacttc gtatacaagg tggtgcaatc cttttacgct caggtcgcca atatacatgg
     3001 cgggccgctt gcgaactgct tccaaacctt ctaaaacctg tatgctttct gctccgtaat
     3061 ttccttcttg cggcgtggga ttcacttgct cttcattcat aaaatctgtg cggaaaaact
     3121 gatgtgatct tcaaaaaatt gactggccgc gaagttactg aaaggcagcc gtttttccgc
     3181 ataaaatacg gcctattttg gtacttgatt ttgcacacga aaaagaagtt gtccacgcgt
     3241 atttatcgat ggtttttccg tctttttagg aaagtgtaat gcctgcttat cgatcatgcg
     3301 tttaccaccg tgccgccatt tggatggagg atctggcccg taaagtatga cgactcctca
     3361 gtggcaagga acaggtatga atacgcaacc tcaacaggtt cacctgcgcg cttcatcggc
     3421 gcgttctttc catgctcact ggtccttttc tcatcaaatg aagcggggat caatggcgtc
     3481 cagatcggac caggcgcaac cccatttacg cgaatacctt ttttaacgag attctgcgac
     3541 aaactgcggg taaatgccgt gatagcgcct ttggtggcag aataatccag cagttcagga
     3601 ctccctttgt atgcagtgac tgaagtggtg ttgatgatga cgctgccctc agccatgtgc
     3661 tttaacgccg cctttgttag ccagaacatc gaaaatatat tcacctcgaa agtgtgaacg
     3721 agattttttg tttcgatctc ttcgatgttt tcagctggga tttgctgtgc tgcgttgttc
     3781 accaggatgt caattctgcc aaattcatcg actgtttttt gaacagcgtc tttacaaaat
     3841 tcttcacggc ttacgtcccc tggaatttga agcaacgtac cgccgtattt ttccacgatc
     3901 tttttcgtgt catccgcatc ttcttgttcc tccgagaggt aaacgatcac cactttagcg
     3961 ccttctttcg caaacaagat ggcaacagct ttgccgatgc cgctgtcgcc gcccgtgatc
     4021 agcgctactt tatctttcag cttgccggtg ggtttgtagt tcggattgtc ggtgaccggc
     4081 ctgggtttca tttcctgttc cgagcctggc aaattctgtt tttgtggtgg aaatggtgtt
     4141 tgtttcgtgt ccatggttag cgtttgtggg ttaaaaaatc gatacgggtt atttcataca
     4201 aattccctgc taagaattgg gagttaggaa gtaagaaata ggaagtagga attagcaatc
     4261 gggaagtagg aggcaggacg taggaagtaa tgcgggaaat tagaaattaa atctgaaacc
     4321 gcagatcata catcatacat cagagatcag agatcggaga tcactgcagt atgtctttca
     4381 acacggaact gaggtcgtta atgctgttag gcttgatgat gtaatctttt gcaccgagca
     4441 ggatcgcttt ttgtccttct cttgaattga tacccgttga ataaatgtac accggaatgt
     4501 gcgccagtga ttttatcttt ctgatttcct caaggcactt aatgccggtt atcctcggca
     4561 tgtttatatc gaggaatatg acgtcgggcg taacagtccg gaggatattt aatgcttcgt
     4621 cgctgcttat ggcgctaata agcgtgcaat cttcgccggt tccattcaac gcggagagaa
     4681 aaatatcatg ttcgtcctcg tcatcgtcga ctaataaaat aatcttttga aaattagttt
     4741 caacagcaag agtctgtaga gtgtctgtca tttccttcat agttgttctt ctctaagctg
     4801 gttttaaaca caatattgca gcaatgatat tatatcgctt catacgttag gatgcaatga
     4861 tgtatttatt aattcagtaa tggttgtaaa ggcttgaaat cggaataaag gtagaaaaaa
     4921 cttgtggaaa caaaaccttt ttttgaccgt tcggcaatcg ggcggcagta tgaattatgc
     4981 gggctctaac aggcaaaatt gataaggctc gagggtcaaa tattcatcat cggcgccgac
     5041 gacgtgttgc aactcttgcc aatggtcata gacgtgctga ggtgtatgac catgttgctt
     5101 aaaaatatac cacgtgagaa aagctttttg tttgctgaaa ttaaagaggc aatataactc
     5161 gtgatgcttg cccgtgcgga tatagcccgc tacgtgaagg ttgtgcggcg gaagccacgt
     5221 aagatttttg tgatcggcaa ttactgaaaa ttttttccta agagcaataa gcctttgagt
     5281 agatgtaaag atcttgttct ccacggtctc ctcttcttca atttttttat ttttttccca
     5341 ctcgataatt ggacgatgca tccaacgatt atcgtaactc tttcctgcgt cgaggagata
     5401 ggagtaatca ttcgtgtatc cggcttcgtc tccgtagaag atcatcggta tgccgccgat
     5461 gaaaaaggtg tgtgcctgca tcatcaaaat gcggctgata gccgtgtcga tctcattttc
     5521 gtcattgtcg agaagcgctt tttcaagccc gcacagtgat gcgagtgacc cgctgatcct
     5581 tgcgtccagc gtttttgcgt tcgccgaaaa taatgcgccg cgtgcaggag aatcgttgta
     5641 gttacccgaa taatattgca ttaagaattt ccgatgttca aatgcattaa aaccggcttg
     5701 ttcgatcata tagtcattat atcccaaacc aatgtcgtcg tggcagcgtg tataagtgat
     5761 ccatgatgtg ccatacggtt ttcgtgaaag ttctggctgt gcagcaagca ttactcttgt
     5821 atcgccggta gcaagagcat cccattgcaa agccatctgt gtggcattgt atgcaaagtc
     5881 gcattctttc gcagtagcga gaccagtgcc aaaatatttc atgatctccg ccggttcaac
     5941 tatcgcctcg gcaagcaggg ccatgcccgg cgttgctgta tttgtgcact gttttatcaa
     6001 ttgaagaatg gtatgcgctc ttggaagatt ttggcaggtg gtgccgactt gtttccagat
     6061 gaaagcgggc gcatctatgc gcagcatgtc gacgccgagg ttggcataga aaaaaatatt
     6121 ttccagcatt tcaacgcata cctgcgggtt tgtgtaattc agatcccact ggtagttgtg
     6181 aaacacggtc atcacccatt tgtcgcattc cgttatataa gtgaaatttc ccggtgcgct
     6241 ttcaggaaag atctcgggca ttgccttttc gaactcatca ggtattgttc gatccggata
     6301 catataaaag tagtcctggt attttgcttc accctgcctt gctttttttg cccatttgtg
     6361 atgatg
//
LOCUS       DASQJI010000059         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_618424,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000059 DASQJI010000000
VERSION     DASQJI010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618424"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /locus_tag="VEV83_01965"
     CDS             <1..1053
                     /locus_tag="VEV83_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HYK43905.1"
                     /translation="GYSVALFEKEEYPFHKVCGEYISLESYGFLQRIGLPLNDWNLPV
                     IKKLVVSDQNGKAYNFKLDLGGFGITRYKIDDELYHLAAEKRVLVYTNTKVNDVLFED
                     DTHIIQTNKGEAAVKTAVCACGKRSNLDVRWQRNFVQQKPGKLNNYIGVKYHVLCDQP
                     ADEIALHNFNDGYCGISAVEENKYCLCYLTTANNLSISNNSILEMQDQVLFRNPVLKK
                     IFNTAEFVNSVPYTISQISFEKKTRVEKHMLMLGDAAGMITPLCGNGMSMAMHSAALA
                     FDQIRLFFQKKISRNEMEKNYLKRWNKNFSSRLATGRFVQRFMGNNSTSLFLKLMHAV
                     PLLSERVIRSTHGNAF"
     gene            1137..1670
                     /locus_tag="VEV83_01970"
     CDS             1137..1670
                     /locus_tag="VEV83_01970"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK43906.1"
                     /translation="MMKVISTLLIILSTSSLLSAQSLKPVNDGSEIQFTIKNFGLNVT
                     GHFSGLTGTIQFDPSNLSTSSFNVSVDATTVNTGVDMRDNHLKKEEYFNTAKYPAINF
                     TSTHITGDANGYTVSGRLTIKGTTKEISFPFTAVRQGDGFIFSGNFSINRKDFDLGGG
                     SAVMGNNVDVSLKVFAK"
     gene            complement(1717..>2325)
                     /locus_tag="VEV83_01975"
     CDS             complement(1717..>2325)
                     /locus_tag="VEV83_01975"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK43907.1"
                     /translation="GITDFNKFAVVNGTDIVLPLAITDLKAWRQGSCVNLLWRSQHES
                     NTDHYEIQNASEAKEFRFVGTAAAKNAPFFNDYSFIDEHPLAGMNYYRIKVVDKNGHE
                     SYSSVVFIDMPQTMNQVSIYPNPVQGSVIRIFAPNVKTGNYWLEMYDRIGRKIFKKEI
                     EYSGTSVSEEIILPSAVAAGLYEIILRNDKEILMKSFLVVVR"
BASE COUNT          685 a          487 c          494 g          659 t
ORIGIN      
        1 ggttattctg ttgcattgtt tgagaaagaa gaatatccgt ttcataaagt ctgcggtgaa
       61 tatatcagtc ttgaaagcta tggcttctta caacggattg gcttgccttt gaatgattgg
      121 aatttgcccg taataaaaaa gcttgtggtc tccgaccaaa atggaaaagc ctacaacttc
      181 aaacttgatc tcggagggtt tggtattact cgttataaga tcgatgacga attataccac
      241 ctcgcagcag aaaaaagagt gctcgtttat acaaacacaa aggttaacga tgtgctgttt
      301 gaggatgaca ctcatatcat tcagacaaat aaaggggaag ctgcggttaa gaccgctgtt
      361 tgtgcgtgcg gcaagcgtag taatctcgat gtgcgctggc agagaaattt cgttcagcaa
      421 aaaccaggca agctgaataa ttacatcggt gtaaaatatc atgtgctctg tgatcagccg
      481 gcagacgaaa tagcgcttca caacttcaac gacggatatt gtggaatttc tgcggtggaa
      541 gagaataaat attgcctttg ttatctcact actgcaaata atttgtcgat aagtaataac
      601 tcgatacttg aaatgcagga ccaggtatta ttcaggaatc ccgttttgaa gaaaatattt
      661 aataccgctg agtttgtaaa ttccgtgcct tatacaattt cacaaattag ctttgaaaag
      721 aaaacacgcg tcgaaaagca tatgctgatg ctaggcgatg ctgccggcat gataacccct
      781 ttgtgcggga atggaatgag tatggcgatg cacagtgcgg cgcttgcatt cgaccaaatc
      841 cggttattct ttcaaaaaaa gatctcacgc aacgaaatgg agaaaaatta tttgaaacgc
      901 tggaataaaa atttttcgtc gcgcctggca accgggcggt ttgtacagcg gtttatgggt
      961 aataattcaa caagcttgtt tttgaaattg atgcatgcgg tgcctctcct gtccgaacgc
     1021 gtcatacgtt cgacacatgg gaacgctttt tgagcgtttc gtgtagacgg ccgttgattt
     1081 taatgtttcc ttagtaacct tatgacaggt aaggaaatct atccgttata aaaatcatga
     1141 tgaaagttat atcgactctg ttaataatct tatcaaccag ttcccttctt agcgcccagt
     1201 cccttaaacc ggtaaacgac gggagtgaaa tacaattcac gataaaaaat ttcgggctga
     1261 atgtaacggg ccatttcagc gggctgaccg gaacgataca atttgaccct tcaaatcttt
     1321 ctacatcatc ttttaatgtt tcggtagacg caacgacggt aaacaccggt gtcgacatgc
     1381 gcgataacca tttgaaaaag gaagaatatt tcaacactgc aaagtatccg gcaataaatt
     1441 tcacatctac ccacattacc ggtgacgcca acggttacac ggtatcagga cgtttgacga
     1501 tcaaaggcac gacaaaagaa atttcattcc cctttacagc ggtacgacag ggcgatggat
     1561 ttatttttag cggaaacttt agcatcaacc gtaaagactt tgatctaggc ggtggcagtg
     1621 cagtaatggg aaacaatgta gacgtaagtt tgaaagtgtt tgcgaaataa agtgttgcct
     1681 gcttaccccc gacgtcgcgc cgggatgagc acaaatctat cttacaacta caaggaaact
     1741 tttcatcagt atctctttat cgtttcttaa gattatctcg tacaaacctg ctgcaaccgc
     1801 cgagggcagg atgatctcct cgctgaccga agtgccggaa tattcaattt cttttttaaa
     1861 tattttcctt ccgatccggt cgtacatctc gagccaataa ttgccagtct tcacatttgg
     1921 cgcaaatatg cggatcacac tcccctgcac cggattcgga taaatcgata cttgattcat
     1981 cgtttgaggc atatcgatga aaacaaccga gctgtaactt tcatgaccat ttttatcgac
     2041 aaccttgatc cggtaataat tcatgcctgc taatggatgt tcatctataa agctgtagtc
     2101 gttaaaaaag ggcgcgtttt tcgccgcagc tgtacccaca aaccgaaatt ctttagcctc
     2161 tgatgcattc tgaatttcat aatgatcagt gttcgattca tgttgacttc tccataaaag
     2221 attgacacac gagccctgtc tccatgcttt tagatctgta attgccagcg gaagcacgat
     2281 atccgttcca tttacaacgg caaatttgtt gaagtcggta atacc
//
LOCUS       DASQJI010000060         2661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1079108,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000060 DASQJI010000000
VERSION     DASQJI010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079108"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VEV83_01980"
     CDS             complement(<1..205)
                     /locus_tag="VEV83_01980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43908.1"
                     /translation="MKTKIYTAITLLMPFAYCNTSGAQSANTSLSNLVSPTAVNIDLL
                     PNKDNKRDLGSSGKSWKDIHLDGS"
     gene            complement(599..>2661)
                     /locus_tag="VEV83_01985"
     CDS             complement(599..>2661)
                     /locus_tag="VEV83_01985"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK43909.1"
                     /translation="LLIYQTNSTPGFYYFDGSIWKPISAKGANQTLSNLTTTSVNAPL
                     QPDSDNVRNLGSASNSWKDIYLDGSVYLGGARFLAYKTGSGANNTAVGSASLNANTTG
                     FNNTATGGTALFLNETGNDNTASGYEALYSNITGSYNVANGTYALYASTGSYNTATGY
                     DALGYNTTGNYNAAVGALALSKNTTGNNNVASGYNALAANTTGYGNVAVGINALKNNA
                     IGHNMVAIGDSALFHQTGDIFYEYGNVAVGSKAMYQNSTGKQNTAIGFEALYTGDDNE
                     LNTAIGYVALHANTGGSGNTGVGAEALSSNTTGYENAALGFGALSGNQTGGYNTATGY
                     TALYRNGGGSSNTASGFQALYSSTGDNNVAIGAGTGISATSADNNTYLGYHAGNTVTT
                     GNSNTIIGYGADVSSGALTNATALGNLAVSGASNRVRIGNGSVSSIGGAVGWTNFSDE
                     RIKTDIKENVPGLKFINLLKPVTYHFDIDKEENITGRKSDAWDGKYDIKKIQFTGFLA
                     QEVEKASKQVGYDFSGVDEPKNEKDLYGLRYAEFVVPLVKAVQELSKMNDEKDSKIHN
                     LQNQLNDQQKQIDELKSMIVSNRPTANSQQSTIASASLQQNIPNPFNHTTTINYTLPP
                     QYSLAKIIITDKSGKVLKESNLTTGGKGSLNVDASTLSSGAYQYSLYLDGKLIDTKQF
                     VVAK"
BASE COUNT          658 a          582 c          570 g          851 t
ORIGIN      
        1 ctgaaccatc gaggtggatg tctttccatg acttacccga tgaacccagg tcgcgcttat
       61 tatctttatt aggcagcagg tcaatattta ctgcagtggg tgaaacaaga ttggataaac
      121 ttgtgtttgc actttgtgca ccgctcgtat tgcaataagc aaatggcatc agtaaagtaa
      181 tcgcagtgta aatttttgtt ttcataattc atgtttgttg atgttattgt tttgaagaac
      241 acaagatcca gatgttgaaa gattgatcac aatctttgcg gaggttctaa ttcgtggtgc
      301 acttcgtggc cctggatttt ttggagcaca acgaacacga agaagacact atgaagacaa
      361 agtgggatca aaaaaatatt catcgcgtta aaatcttttg tgtccgttgt gattcgtcgt
      421 ccacttcgtg ctcctgaatt tttggagcac agcgagcgaa gaagacacta tgagcacaaa
      481 gtgtgcgatc aaaaaatatt cgtctcattc gaatctttgt gtccgttgtg attcgtcgtg
      541 cactttgtgt tcctggattt ttttcgagca caacgagcac gaaaaatctg caacacattc
      601 attttgcaac aacaaattgc ttcgtatcaa tcaattttcc atcaaggtac aaggaatatt
      661 gatatgcccc tgatgaaagc gtagaggcat ccacattcaa gcttccttta ccacccgttg
      721 tgagatttga ttccttcaac actttgccgc tcttgtcggt gataatgatt ttggctaatg
      781 aatattgtgg cggtaatgtg taattgatgg ttgttgtatg attgaaagga ttcggtatgt
      841 tttgctgaag cgaagccgaa gcaatagttg actgttgaga gttggcagtt ggccgatttg
      901 aaacgatcat cgattttaat tcatcgattt gtttttgctg atcattcaat tggttttgca
      961 ggttgtgaat tttggaatct ttttcatcat tcatcttgct tagttcctgc actgctttca
     1021 ccagcgggac aacgaattct gcataacgta atccatagag gtctttttcg ttctttggtt
     1081 catcaacgcc actgaaatca taaccaactt gtttagacgc cttctccact tcctgtgcaa
     1141 gaaatcctgt gaactgtatt ttctttatat catattttcc atcccaggca tcagattttc
     1201 tgcctgtaat attctcttct ttgtcgatat caaaatgata agtcaccggt ttcagaagat
     1261 tgatgaattt taaaccgggc acattttcct ttatatctgt ttttattctt tcgtcagaaa
     1321 agtttgtcca gccaactgca ccaccaatgg aactgacaga accattgcca attcgcaccc
     1381 tgtttgatgc acccgacaca gctaaatttc cgagtgctgt tgcgttggtc aaagcgccgc
     1441 tgcttacatc tgcaccataa ccgataatag tatttgagtt tcctgttgtg acagtgttgc
     1501 ctgcatggta accgagatat gtgttgttgt cagccgaagt agcagagatg cctgtgcccg
     1561 ctccaattgc gacattattg tcacccgtag agctatacaa tgcctggaag ccgctggcag
     1621 tgttggaaga gccgcctccg ttcctgtaca acgctgtgta tcctgttgcc gtgttgtatc
     1681 cgccagtttg atttcccgac aatgctccga aacccaatgc ggcattctca taaccggtag
     1741 tgttcgaact aagcgcttca gcgcccaccc cagtattgcc gctgccgcct gtgtttgcgt
     1801 gaagtgccac ataccctatt gcagtattaa gttcgttatc atcacctgta taaagtgcct
     1861 cgaagcctat tgcagtgttt tgcttccctg tagaattctg atacattgct tttgacccca
     1921 cagctacatt tccatattca taaaatatgt cacccgtttg atgaaacagc gcagagtctc
     1981 cgatcgccac catattgtgc ccgatcgcgt tattttttag tgcattaatt cctacagcca
     2041 cattgccgta gccggtggta tttgccgcaa gtgcattgta tccactggct acattattat
     2101 ttccggttgt atttttcgaa agggccaagg ctcccacggc ggcattataa tttccggtag
     2161 tgttatatcc tagagcatcg tatccagttg ctgtattata agagccggtg ctggcatata
     2221 aggcatatgt gccattagca acattgtagg agccggtgat gtttgagtac agagcctcat
     2281 atccgcttgc agtgttatcg ttgcctgttt catttaaaaa caacgccgtt ccaccggttg
     2341 ctgtgttgtt gaagcccgtt gtatttgcat ttaacgaagc agagccaact gcagtattat
     2401 ttgcgccgct gcctgtttta tatgcgagaa atcttgcccc tcctaaataa acagagccgt
     2461 ccagataaat atctttccat gagtttgaag ctgagcccag gtttctcaca ttatcactgt
     2521 ctggctgcag cggagcattt acggaggttg ttgtgagatt agacaaagtt tgattggcgc
     2581 ctttggctga tataggcttc catatcgatc cgtcgaaata ataaaagccc ggcgtgctgt
     2641 tggtttgata gatcaataag c
//
LOCUS       DASQJI010000061        17687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_157991,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000061 DASQJI010000000
VERSION     DASQJI010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17687
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157991"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..1617)
                     /locus_tag="VEV83_01990"
     CDS             complement(91..1617)
                     /locus_tag="VEV83_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HYK43910.1"
                     /translation="MPAADEFLKTVQTGYAFKGENVKFGVGMFEGNVLRNADVFLPLK
                     TMNRHGLIAGATGTGKTKTLQLISEFLSDASVPVLLLDIKGDLSGLAAAGSANDKVIE
                     RCRLVNFSYEPSAFPAEFLSLSNEKGVRLRATVTEFGPILLSKILGLNDTQGGLVAMI
                     FKYCDDNKLPLLNLQDFIKVLQYVSNEGKDEIKKMYGNVSSTSTGTILRKVIELQQQG
                     ADIFFGEPSFEIDDLMRINDDGRGVINILRVTDMQSKPKLFSTFMLQLLAELYATCPE
                     EGDVDKPKLVMFIDEAHLLFEESTDALLQQMETVIKLIRSKGIGIFFCTQNPQDVPAS
                     VLSQLGLKIQHALRAFTAADRKTIKQAAENFPETPFYKTEDLLTQMGIGEALVTFLND
                     RGIPTPLVHTMLCPPRSRMDVLTSAELEAIVDKSKLVPKYNREIDSRSAYEILNQKLE
                     DASSRSAQSVQTKSSREKKETSIFDTPAMRQVERTAASVITRSVLGALGLGGRSRRRW
                     "
     gene            complement(1619..2605)
                     /locus_tag="VEV83_01995"
     CDS             complement(1619..2605)
                     /locus_tag="VEV83_01995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HYK43911.1"
                     /translation="MTKFERSIVTFAPVAFLIDRSKKMILPGFHGLCLYDVARFFINQ
                     VNRIGLRDRASAVAFNFVMAIPATAIFLFTLIPYFPIAKKIQKELFDFIQDVLPDNES
                     RSLIMTTMNDLFNKPKTGLLSIGFILALFYSSNAMLGIIRTFDASLVVKRKRNFLHRR
                     LRAIKLTLILLLLLIATILLTIGQGALFASFLNWLHVSHIEKNFWTELLRWFLMIMLF
                     LYSIAFIYKYAPSVHKRWKLLSPGAIFATFLIILTTSLFSVWAQNFSSYNRIYGSIGA
                     LLLVMLLIFINSFMLLIGYELNVSINYLKTKSDEKKIEQIINTPELSKSLKN"
     gene            complement(2602..3648)
                     /gene="mltG"
                     /locus_tag="VEV83_02000"
     CDS             complement(2602..3648)
                     /gene="mltG"
                     /locus_tag="VEV83_02000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HYK43912.1"
                     /translation="MKRIILISFGIIVLLVLIIAWIFFGPATKFPESSRYLYVRDQPS
                     GEVQIMRQVDTAHLIRNSSLFSFLAKQSKAWQRVKPGRFEIKKGESIFSLVRKLRNNS
                     QSAVRLTVKKIRVREDLAHVIGRNFSSDSATAMNFLSNNDSLIGLGVDTNTVMTLVIP
                     DTYFFNWNTSVKNILERLKNEEEKFWVKDDRRKKASSLNLTPNQVYTLASIVEEETNK
                     NDEKGNIASVYYNRLNNGMKLQADPTVKYATRNFAAKRIYTTYLSTPSAYNTYLNYGL
                     PPGPICTPQTTTIDAVLNMPRTDYLFFVARSDFSGYHQFSNNFAEHQKYARQYQEVLN
                     EWLKRDSLNKNSAH"
     gene            complement(3782..4720)
                     /locus_tag="VEV83_02005"
     CDS             complement(3782..4720)
                     /locus_tag="VEV83_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HYK43913.1"
                     /translation="MIQFFKNISNKTVEIEKPESDIWVNLMPPFKEEEFVQLSTSLGI
                     PIEFLRDSLDIDERPRYEVEDEVRFIVIKTPAENNSFNDSDAFYITIPICIILTPYQI
                     ITVNSFDNDAIKKFLSTFQKRNPEKRNMMVLKIFEKVVQNFMDFLKEINNRRNTYEQK
                     LYDSNRNEELLNLMRIQKSLLYFVTALRGNELLMMKLERTNFLGMSEEEREILNDLIV
                     ETSQALEMANIYNNILSSTLDAFASIISNNLNNVMKRLTSITIILSLPALVTSIYGMN
                     VEIPYAHTAHAFYIPVVLSLVVSIIIAGYFMKKKWF"
     gene            complement(4803..5609)
                     /gene="dapF"
                     /locus_tag="VEV83_02010"
     CDS             complement(4803..5609)
                     /gene="dapF"
                     /locus_tag="VEV83_02010"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HYK43914.1"
                     /translation="MKQSIHDLMAITFYKYQGTGNDFVIIDNRGTTVDLTKEQIHRLC
                     DRHFGIGADGLMLMNEHAGFDFEMKYYNADGNESSMCGNGGRCLVQCAIDLGLLKREY
                     VFNAIDGEHRASVEDNGWIALKMQDVQRIDSSFFSDFILDTGSPHYVKSVSDVWNYDV
                     VKEGREIRYSKRFAKEGINVNFVEVGNEENISVRTYERGVENETLSCGTGVTAAALVF
                     AHNDNGFNRVEVRTPGGHLAVEFDKLGDTSFRNIWLSGPATFVFKGETEI"
     gene            complement(5590..6471)
                     /locus_tag="VEV83_02015"
     CDS             complement(5590..6471)
                     /locus_tag="VEV83_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HYK43915.1"
                     /translation="MLVIPESELVINERGAVYHLNLLPEELAPIVITVGDPSRVAQVS
                     SRLDEVELKRQHREFVTHTGRLGAKRISVISTGIGTDNIDIVLNELDALVNIDLSQRK
                     IKQDFRSLKIIRIGTCGSLTTPVAVDSFVVSTHALGLDNLLNFYTNANNEEEKNILQH
                     FNACTQINETVSPPYIAGASASLLKHFVEGFHHGITVTCPGFYGPQGRVLRLGLANPE
                     LMNSIAQFEYGNYRILNFEMETSGIYALGKLLGHHCLSISAVVNNRITGKFTNDVNAV
                     VDRLIKKTLDILETINT"
     gene            6653..6723
                     /locus_tag="VEV83_02020"
     tRNA            6653..6723
                     /locus_tag="VEV83_02020"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6685..6687,aa:Cys,seq:gca)
     gene            6768..7160
                     /locus_tag="VEV83_02025"
     CDS             6768..7160
                     /locus_tag="VEV83_02025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43916.1"
                     /translation="MKYSQLLGVFGVIALAGVCYMPWSVIPEKHLTVTGMSTAGTDFG
                     KPGLMHVVLGVLLIAFFLVPKLWAKRINVFVAAINLAWGIRNYILLSTCYMGECPVKK
                     PGLFLMLSLCTFIQVMTLFPKIELPSND"
     gene            7376..8443
                     /locus_tag="VEV83_02030"
     CDS             7376..8443
                     /locus_tag="VEV83_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK43917.1"
                     /translation="MFKRTTTTIISGILSLAAFSQTDSSKTSPSPTFSGSVDAYYRYN
                     FANAKGADGKPITNNYTSFTNSHNSFELGMASIRADHSFGKVSATADLGFGKRAEEFS
                     YNDDGITAAVKQLYMTYTPVNNLKFTAGKWATGFDCELPDAYLNRNYSMSYLFSYGPF
                     FHTGLKAEFTKGQTLFMLGVANPTDYTSTTESHKFVIAQIAYTSKDSKLKTYLNYHGG
                     KSNDSSKINGFNLTAFYTVSSKFSIVSNSSLKLAQSRTIEKWSSADKWWGTALYLNVD
                     PISWFGLTWRNEYFNDEEYLAGFGGNIFESTLSGNFRIDNLTIIPEFRLDNAKNEIFY
                     KNDGSTTGSTGSFVLGVTYHF"
     gene            complement(8526..10565)
                     /locus_tag="VEV83_02035"
     CDS             complement(8526..10565)
                     /locus_tag="VEV83_02035"
                     /inference="COORDINATES: protein motif:HMM:NF025486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HYK43918.1"
                     /translation="MIKRVGVIVFLTMLHAVIYAQVYDTIPGEQYQYDSRGRPVKVDT
                     ASQTLKHRDIYEDSITIFFRYWDSTRINKIDSSINDFYTRFPVSWRYTDLGNFGSAAR
                     PFVFHPILTPGFDAGFHGYDVYRYTPENTRFFQTTRPYSETIYMIGSRAEQMIDLFHT
                     QNRKSNFNTGFEFRVINSPGAFKNQNTNISTLRLNSFFQTNNKRYSNYFVYIHNKILA
                     SENGGLKENQNLDSLSFNDPFGANTKLGSEVITYRSVFGSNIAIGTEYQEGIFLMRQS
                     YDFGQKDSLVTDSVTYKLFYPRIRFQHTFEYSKNSYEYHDFAAVDSDYNNYFHFALPA
                     GTDTIRFTDNWQNLTNDLAIISYPQKNNLNQFLKLNAGYEWLKGELNPYIKTYTNIYA
                     AAEYRNRTRNQLYDVEASGKLYVTGHYAGDYSAYISLRRSLKKNIGSLLLGFQNVNRT
                     PSFMASEYIADTNFKQSLTNFPVNPQGSFNKENTTRMFAVIDVPPAHLQLMGEYYLVT
                     NYTYFATLYNSTQESTLFNVLHVSAAKVIGLSKHWNWYLEGDVQQATGNPPVNLPLVL
                     ARSRIAYEGNFFKNLFLSTGFEVRYHTPYKADGYSPLTGQFYFQDTTTISNRPDINAF
                     LNFRIKSFKAFIRMENLNSLDPSNGWAFTKYNYVAPNYPAKALWFRLGIWWSFVN"
     gene            10757..12316
                     /locus_tag="VEV83_02040"
     CDS             10757..12316
                     /locus_tag="VEV83_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYK43919.1"
                     /translation="MRKLFAALTAGCLISVHGSSQEKIDLSVIQKIKQEEADQSQVMK
                     IAFNLTDSSGPRLTASPGFMRAANYAKQQLQQWGLVNVMLDPWGEFGKGWQLEKSYVA
                     MKAPYYRPINAFPKAWCDGTNGLQSADVLLITAKDSAGLDEYRGKLAGKILIVDRDLQ
                     YHQSFQPDAKRFTRAELDSMGSITTIESDTAAQRRRREFFARMSPPLSMVNELKKIAK
                     QDGAIALLSMSAFSHDGTLFVQGGGSYKTTDLQNFLDIQIGLEDYLTTLRLLKAGVAV
                     KLEADVQTTFYSNDMNGYNVIGEIPGTNPALKDEVVMLGAHLDSWQGATGATDNGAGS
                     VVMMEAVRILKALNIQPKRTIRIALWSGEEQGLLGSKGYVKKTFGDPKTMQLLPAHQK
                     FDVYFNVDNGTGKIRGIYLQGNDACREIFSNWFEAFGDSSAKTVTLSKTGGTDHQSFD
                     AVGLPGFQFIQDPIEYDTRTHHSTMDSYDHLIADDLKQMASVVAAFVYTAAQRDDKLP
                     RKELPKVVPTQ"
     gene            complement(12331..13155)
                     /locus_tag="VEV83_02045"
     CDS             complement(12331..13155)
                     /locus_tag="VEV83_02045"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HYK43920.1"
                     /translation="MDKNILQQLTETTAFIKSKYAASPHIGIILGSGLGNFTQEMQID
                     TEISYEDLPHFPVSTVEGHSGKLIFGKIADRNIIVMAGRFHYYEGYSTQQVTFPVRVM
                     KMLGVEILFISNAAGGVNTEFRVGDLMIIKDHISFFTVNPLLGKNEDAIGKRFPDMSE
                     PYSKDLIAKAKSVAKQLGYTLQEGVYTGVTGPSFETRAEYKLIRALGGDAVGMSTVQE
                     VIAAVHAGIKVFAVSVITDIGIREEENKITHEEVLAAAAEAEPKLTVLLKEMIALV"
     gene            complement(13355..14557)
                     /locus_tag="VEV83_02050"
     CDS             complement(13355..14557)
                     /locus_tag="VEV83_02050"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK43921.1"
                     /translation="MYNRNSLLWLFLGAAVLLISCKPATPTEQYGFITRLGNDTISVE
                     SVTRQGNTLTSDEVDRFPRVRIRHAVIELADDGSIRHLAMDIHTPSEPANQRERKVIA
                     DVTADAVHISKTDGTGTVKRDFASGGGVVVAHVPQMYSLYEIYFAAALRHATASKLDV
                     ELRQFYIDREFDGFPLGRAHVRQLGGGKMEVWHDWLSGTGEATVDSNYHMLSYSGART
                     TYKVNVTRLATPPDVKDIADRFEAQEMKAGPVREISVRDTVRAQIGDAMFTVDYGRPL
                     ARGRKLLGDVIVYDRVWRTGANAATQFTTSVPITLAGMQVPAGKYTLWTVPHTSGVDL
                     IVNKQTGQWGTDYRGSENLGTSRMNSETLTTPVEKFTISIVSSDPKHGTLAMEWGSFR
                     WTAPIEVK"
     gene            14751..15947
                     /locus_tag="VEV83_02055"
     CDS             14751..15947
                     /locus_tag="VEV83_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43922.1"
                     /translation="MQTITVHGPTARKEKMYLVSIRDMIAKTILSIPLIAAMCMLTSH
                     APATHPLRPADTASVKRYLYVAVPGIRDYLGYGGHGILVFDIDHDHRFVKRIPTKGFH
                     PDGSPSNVKGIAVSIPLNSVFISTIESLQRIDLATDKVVWEKTFEGGCDRMAISPDGK
                     TMYLPSFEGPFWNVVDCETGNIIKKIDVYKRAHNTIYGPSGRNVYLDDIASAWLYVAD
                     AEKNQLAKKVGPFSNFVRPFTINAKETLAYVTVDSLLGFEVGDLTSGKKISHVEVKGW
                     DAGPVRRHGNPSHGIALTPDEKELWLADGHNMRLHVFNADAPYQQLTTIPLRDMPGWI
                     TFSIDGNFVYPSSGEVIEAKSRKIITVLQDEFHNNVGSEKMVEIDFAGNQAVNAGNQF
                     GIGGLR"
     gene            complement(16057..16776)
                     /locus_tag="VEV83_02060"
     CDS             complement(16057..16776)
                     /locus_tag="VEV83_02060"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HYK43923.1"
                     /translation="MHDYEMENQNVIALQRKAGKLAGLLFLVAMATGLFAEIYVRFPS
                     TLIVSGDASKTASNIIANERLYRIGIANNLITFALDVVLIWALYTLLKRVNRNVALLA
                     LLFRLVETTIACVAIIYSYVAMQYITDADHLKAFDSNQLENLSIMHYTYALAFNVVAI
                     FLGLGSSLFNYLLFKSAYIPKALAVWGMFASLLLLLSQFTIIIFPGTERIIIPACYGP
                     IAIDEIALGMWLLFKPLNIPG"
     gene            complement(17072..17650)
                     /locus_tag="VEV83_02065"
     CDS             complement(17072..17650)
                     /locus_tag="VEV83_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43924.1"
                     /translation="MSERVSALLFAALLVSAGISAQDKKIDTVVSQGAVGYRVVCNNK
                     SPSSNEVSISPKGFGKDVKNMAFTLKGTLRKILLDDLNADGYPDVILCIYSGVDGEIG
                     NAAAVVSAGKNSLTPAALPDIYSNPALREGYKGHDVFTTLMGTVMQSFPVYKTGNADT
                     ATGITRVIQYDIGKSESGGITFKVLRSYEKKN"
BASE COUNT         4858 a         3997 c         3862 g         4970 t
ORIGIN      
        1 tactgaatcg gcgtttttga ggcaaggcat ttcacgaatg aaatccgtca gaccgcttta
       61 agcgttccga cggttggccg atgtcagaca ctaccaacgt ctcctgcttc gtcctcctaa
      121 acccagcgca cctaaaacgc tcctggtaat tactgaagca gcggttcgtt ctacctggcg
      181 cattgcgggt gtatcgaaga tgctcgtttc ttttttttcg cgtgacgatt tagtctgaac
      241 ggactgagct gagcgggaac ttgcgtcttc cagcttttgg ttaaggatct cgtatgcact
      301 gcggctatct atttccctgt tgtattttgg caccagttta ctcttgtcca cgatcgcttc
      361 cagttccgcg cttgtaagca catccatgcg actgcgcggc gggcacaaca ttgtatgcac
      421 gagtggcgtt ggtatccctc ggtcattgag gaacgtaacc aatgcttcgc caattcccat
      481 ttgagtaagc aggtcttccg ttttgtaaaa cggggtctcg ggaaaattct ctgcggcttg
      541 tttgatcgtc tttcgatccg cagccgtaaa ggcacgcaat gcatgctgta tctttagtcc
      601 aagctgactt aaaacggatg cgggcacatc ttgcggattc tgcgtgcaaa agaaaatacc
      661 aattcctttc gagcggatca gttttattac agtttccatc tgctgcaaca aagcgtcggt
      721 cgattcttca aacaggagat gcgcttcatc tataaacatc acgagcttag gtttatcgac
      781 gtcgccttct tccggacaag ttgcatacaa ttccgcaagt aactgcagca tgaatgtcga
      841 aaataatttt ggtttgcttt gcatatcggt tacccgcaaa atattgatga caccccggcc
      901 gtcatcgttt atgcgcataa ggtcgtcaat ttcaaaactc ggttcaccaa aaaatatatc
      961 cgctccctgt tgctgcaatt cgatcacttt tcttaaaatc gttcctgttg acgtcgacga
     1021 aacgttgccg tacatttttt tgatctcatc ctttccttcg ttgctcacat actgcaggac
     1081 cttgatgaaa tcctgtaaat tgagcaatgg caatttgttg tcatcgcagt atttaaagat
     1141 catggccaca aggccgcctt gcgtatcatt taagcctagt atttttgaaa gcaagatcgg
     1201 gccaaattcc gtgaccgttg cgcgcaggcg aactcctttt tcattgctta aagacaaaaa
     1261 ttctgcagga aaagcggacg gttcatagct aaaattcacc agccggcacc gctcaataac
     1321 cttgtcattc gcagatccgg cggcggcaag cccactgagg tctcctttta tgtccagcaa
     1381 caaaaccgga acactggcat cactcaaaaa ctcgctgatc aattgcaacg tttttgtttt
     1441 gcccgtgccc gtggcgccag caatcagtcc atggcggttc atagttttca gcggcaggaa
     1501 aacatctgca tttctcaata cgttcccttc aaacattccg acgccgaatt tcacgttctc
     1561 acctttgaat gcatatccgg tttgtactgt tttcagaaat tcgtctgctg ctggcatatt
     1621 aattctttaa agattttgat agttcaggcg tgttgatgat ctgctcaatt ttcttttcgt
     1681 ccgatttcgt tttaagataa tttatactca cgttcagttc atagccgatc agcaacataa
     1741 atgaattaat gaaaataaga agcataacaa gaagcaatgc cccgatcgat ccatagatgc
     1801 ggttgtagct ggaaaaattt tgcgcccaca cagagaaaag cgaggtagta agtatgatga
     1861 ggaaagttgc aaaaatcgct cccggcgaca acaatttcca tcttttgtgg accgatggag
     1921 catacttata aataaaagcg atagaataaa gaaacaacat gatcatcaaa aaccatcgca
     1981 gtaattctgt ccagaaattt ttttcgatat ggcttacatg cagccagttc aggaacgatg
     2041 caaacaatgc gccctggccg atcgtaagta aaatggttgc gatcagcagc aacaataaaa
     2101 tgagtgtcag ctttattgct cttaaccggc ggtgcagaaa atttcttttg cgctttacta
     2161 ccagggacgc gtcaaacgtg cggatgatac caagcattgc attcgacgaa tagaacaacg
     2221 ccagaataaa tccgatggac agcaggcctg tttttggttt attgaacaga tcgttcatcg
     2281 ttgtcatgat cagcgaccgc gactcattgt cgggcaatac atcctgtata aaatcaaaaa
     2341 gttctttctg tatttttttc gcaatgggaa agtatggtat aagcgtgaat aaaaagatcg
     2401 ccgttgccgg gatggccatt acaaaattga aggcgacggc ggatgccctg tcacgaagac
     2461 cgatgcggtt tacctggtta ataaaaaatc gcgctacatc gtaaaggcat agtccgtgaa
     2521 agccgggcag aatcatcttc ttgcttcggt cgatgaggaa agcaacaggc gcaaacgtta
     2581 ctatagatcg ttcaaatttt gtcaatgcgc agaattttta tttaaactgt cccgcttcag
     2641 ccactcgttc aaaacttcct ggtattgcct cgcatatttc tggtgctcgg caaagttatt
     2701 actgaactgg tgatagccgc tgaagtcgct gcgcgcaaca aaaaacaagt aatctgtcct
     2761 tggcatattc aacaccgcat ctatcgtggt tgtttgcggc gtgcagatcg gccctggcgg
     2821 caacccatag ttaaggtacg tattataagc ggaaggcgtt gacaaataag tcgtataaat
     2881 tcttttcgct gcgaaatttc gcgttgcgta tttcacggtg ggatctgcct gcaacttcat
     2941 gccgttattc aaacggttgt aataaacact tgcaatattt cctttttcat cattcttgtt
     3001 ggtttcttcc tccacgatgg atgcaagtgt gtaaacctgg ttgggtgtaa ggttaagcga
     3061 cgacgctttt ttccggcgat catcttttac ccaaaatttt tcctcctcgt tcttcaaacg
     3121 ttcgaggata ttttttactg aagtgttcca gttgaagaaa tatgtgtcag gaataacaag
     3181 tgtcattaca gtgtttgtgt ccacacccag accaatgaga gagtcattgt tagataaaaa
     3241 attcatcgct gttgcggagt ctgaagaaaa atttcttccg atgacgtgag caagatcttc
     3301 tctcacccgt atttttttta cggtaagccg caccgcgctt tgactattgt tgcgaagttt
     3361 ccgtaccaac gagaaaatac tttcgccctt ttttatttca aacctgcccg gtttaacgcg
     3421 ctgccacgct ttcgattgtt tggcgagaaa actaaataac gagctgttcc ggattaaatg
     3481 cgctgtatcc acttgtcgca tgatctgcac ctctcctgaa ggttggtctc tcacatatag
     3541 atagcgcgac gactcaggga attttgttgc agggccgaaa aagatccatg cgatgatcag
     3601 cacaagcagg actatgatgc caaaagaaat taggattatt cttttcattc aaaggcaaat
     3661 ttaaatgagc gatcattccg taaataattt tcaacttttc tttcatcatt tcgaaaatga
     3721 agcctgcagc ctaaatgaaa agtcacagat cagagatcac agatcataca tcagagatct
     3781 tctaaaacca ctttttcttc ataaagtacc ctgcaatgat aatagacacc accagtgaaa
     3841 gaactacggg gatataaaaa gcgtgggcag tatgggcata agggatctcg acgttcatac
     3901 cataaatgct cgttactaaa gcaggcagcg aaagtatgat cgtgatggat gtaaggcgct
     3961 tcattacgtt gttcaggttg ttgctgatga tgctcgcgaa tgcatcgagc gtactgctca
     4021 atatattatt gtagatgttt gccatctcaa gcgcctggct cgtttctacg atgaggtcgt
     4081 tcagtatttc acgctcttct tcgctcatcc caaggaaatt agtgcgttca agcttcatca
     4141 tcagcagttc atttccgcga agcgcagtta caaagtataa aaggcttttc tggatccgca
     4201 tcaggtttag cagttcttca ttacggttgc tgtcgtacaa tttttgttcg tatgtatttc
     4261 tcctgttgtt gatctccttc aaaaagtcca taaagttttg caccaccttt tcaaagatct
     4321 tcagcaccat catatttctt ttctcagggt tacgtttttg aaaagtgctc aggaatttct
     4381 taatggcatc gttgtcaaag gagttaacag taatgatctg gtatggcgtc aaaatgatgc
     4441 aaatggggat cgtgatatag aacgcatcgc tgtcgttgaa cgaattattc tccgcgggcg
     4501 ttttgataac gataaaacgc acttcgtcct ccacttcata acgggggcgt tcatctatat
     4561 caagagaatc tcttaaaaat tcgatgggta tcccgaggct ggtacttagt tgaacaaatt
     4621 cttcctcttt aaaaggaggc attaggttga cccagatatc gctctccggt ttttcaattt
     4681 caaccgtttt gttactgata tttttaaaaa actggatcat tcgcgttgaa ccctgtgaat
     4741 ctcatttgat cgtttgactg ttaatcgtgc gcgaaagtaa gcgatgtgta ttttataatt
     4801 cgctaaatct cggtttcgcc tttaaaaaca aacgttgccg ggccggagag ccatatatta
     4861 cgaaaggaag tatcgcccaa tttatcaaat tcaacggcga gatgcccgcc tggcgttcgt
     4921 acttcaaccc tgttgaagcc gttatcgttg tgggcgaaaa ccagcgctgc tgcagtcaca
     4981 ccagtgccac aactcaacgt ttcgttttca acgcctcgtt cataagtacg aacgcttata
     5041 ttttcttcat tgcccacctc tacaaaattt acattgatgc cttcttttgc gaagcgcttg
     5101 ctatatcgta tttcgcggcc ttccttaacg acgtcgtaat tccaaacatc acttaccgac
     5161 tttacatagt gtggggaacc ggtgtccaaa atgaaatcag aaaaaaatga agaatcgatc
     5221 cgctgtacat cctgcatttt aagtgctatc catccgttat cttccacgct tgcccggtgt
     5281 tcgccatcga tcgcattaaa aacatattcg cgcttcagga ggccgaggtc gatagcgcat
     5341 tgaaccaaac acctgccgcc attgccacac atactgctct cgttcccgtc ggcattataa
     5401 tacttcattt caaaatcaaa acccgcatgt tcattcatca gcatgagacc atcagcgcct
     5461 attccaaaat gacggtcgca aagtcggtgg atctgctcct tcgttaaatc aacggttgtt
     5521 ccgcggttgt cgattatgac aaagtcgttg cccgtgccct ggtatttgta aaatgtgatc
     5581 gccattaagt catgtattga ttgtttcaag aatatcgagc gtctttttta ttaaacgatc
     5641 gaccacagca tttacatcat ttgtaaattt acctgtaatc cggttgttca cgactgcgct
     5701 aatacttaaa caatgatgcc ccagtaattt tccaagcgcg tatatgccgg aagtttccat
     5761 ctcaaaatta aggatgcgat aatttccata ttcaaattgt gcaatgctgt tcatgagttc
     5821 aggattggca aggcccagtc tcaacacacg gccctgcgga ccgtaaaaac ccgggcaggt
     5881 gacggtaatg ccgtgatgaa aaccttcaac aaaatgtttg agcaaggacg ccgatgcgcc
     5941 cgcgatgtaa ggcggcgaaa ctgtctcatt tatttgtgta cacgcattga agtgttgcag
     6001 aatatttttt tcttcttcat tgttagcatt cgtataaaag ttcaggagat tatccaaacc
     6061 gagtgcatgc gtagacacaa cgaagctgtc cacagcaacc ggtgttgtta aagagccgca
     6121 cgttcctatc ctgataattt ttaaactgcg gaagtcttgt tttatttttc tttggctgag
     6181 atctatgtta accaacgcat cgagctcatt gagcacaatg tcgatgttat ctgtcccgat
     6241 gcctgtggaa ataacgctga tccgttttgc tccaagcctg ccggtgtgcg tcacgaattc
     6301 ccggtgctgc ctcttcaatt ccacctcatc caaacgactg ctaacttgcg ctacccgcga
     6361 aggatcaccg accgttataa caatgggcgc gagttcctcc ggaaggagat tcaaatgata
     6421 aaccgcaccc ctttcattaa taactaattc gctttctggt atcaccaaca tattgtattt
     6481 ttcctttcac ggagtttacg aaattcggct tttattgttg tcggctgaaa tacaagaagc
     6541 ccatatttca aattacgctt gtaatattga ataaccagtt tctgcgcatt aacacgattg
     6601 tttttgatgc ttgccccctt tgatttattt tcgcagccgt atattttaaa aaggttccgt
     6661 ggccgagtgg ctaggcagag gtctgcaaaa ccttccacag cagttcgaat ctgctcggaa
     6721 cctcaggaaa gatccccggt tcaggcgggg atttttaatt ttagaagatg aagtattcgc
     6781 aactcttagg cgttttcggt gtcatcgcgc ttgcaggagt gtgctatatg ccctggagcg
     6841 ttattccgga aaagcatcta acggtgacgg gcatgagcac cgccggtacc gactttggta
     6901 agccgggact gatgcatgtt gtattaggcg tgttgttgat cgcgtttttc ctggtaccaa
     6961 agctttgggc caaacgcata aacgtatttg tggccgctat caatcttgcc tggggaattc
     7021 gaaattatat tttactcagc acctgctata tgggcgaatg cccggtcaag aaacccggac
     7081 tctttctcat gttatccctt tgcactttta tccaagtgat gacccttttc ccaaaaattg
     7141 agttaccctc taacgactaa tcacctcacc ggttatacac attagaataa tataaatgtt
     7201 tggcatttga cacgaatatt ggacaaactg ttacttttgt tctaggtaca caagcatatt
     7261 aatattttta atttgatatg cacgggtact actaaagatt gcttgatcag gctggcataa
     7321 gcctgtctgt ttgcatgtga aacgaaaatt gttcttaacg ctaaaaatca agcacatgtt
     7381 caaaagaacc actacaacca ttatttcagg aatcctttct ctggcggcat ttagccagac
     7441 agactcttcc aaaacatcgc catcgccgac tttcagcggc tcagtcgacg cctactatcg
     7501 ttacaatttc gcaaacgcaa aaggcgcgga cggtaagccg atcacaaata attacacgtc
     7561 attcacaaac tcgcacaact cttttgagct gggaatggca agcattcggg ctgaccattc
     7621 atttggaaaa gtgagtgcga ccgctgacct cggttttgga aaaagagcag aagaatttag
     7681 ttataacgat gacggcatca ctgccgcagt gaagcaatta tatatgacct atacacccgt
     7741 caataattta aagttcacgg cgggtaaatg ggcgaccggt tttgattgtg aacttcccga
     7801 cgcatatctc aaccgaaact atagcatgag ttatttgttt agctatgggc cgttttttca
     7861 cacaggactg aaagctgaat tcacaaaggg gcaaacgttg ttcatgctcg gtgttgcaaa
     7921 tccaactgat tatacaagca caaccgaatc acacaaattt gtgatagcgc agatcgccta
     7981 tacatcgaaa gacagtaaac taaaaaccta tctcaactat cacggcggca aatcgaatga
     8041 cagctcaaag atcaacggtt tcaacctgac tgcattttac acagtatctt ccaaattcag
     8101 cattgtaagt aacagttctt taaaacttgc tcaaagcaga acaatcgaaa aatggagttc
     8161 ggcggataaa tggtggggta ccgcgctgta cttgaacgtt gatcctatca gctggtttgg
     8221 cttaacctgg cgtaatgaat atttcaacga cgaagaatat ttagctggtt tcggtggtaa
     8281 tatttttgag tcaacgcttt ccggaaattt ccgaattgat aatttgacca tcattcccga
     8341 attccggctc gacaacgcca agaatgagat cttttacaaa aatgacggta gtacaaccgg
     8401 cagcaccggc tcattcgtcc ttggcgtaac ctatcatttt taaggcgagg gaggttttca
     8461 atgaacccga ccgcaatctt tcgatcggcg gttgggtttt cattccttgt tttttaacgt
     8521 gatggtcagt tgacaaaact ccaccagatg cccagtctaa accacaaggc cttcgccggg
     8581 tagttgggag caacgtaatt atattttgtg aatgcccagc cgttggatgg atcaaggcta
     8641 ttcaaatttt ccatccggat aaaagccttg aagctcttga tgcggaagtt caggaaagca
     8701 ttgatgtcag gacggttcga gatcgttgtt gtatcctgaa aataaaactg tcctgtaagc
     8761 ggagaatatc catccgcttt gtatggtgtg tgataacgaa cctcgaagcc ggtcgacaaa
     8821 aaaaggtttt tgaaaaaatt tccttcatag gcaattctgc tgcgcgccaa caccagcggc
     8881 aaatttacag gcgggttacc ggttgcctgt tgaacatcgc cttccaaata ccaattccag
     8941 tgcttgctta agccaataac ttttgctgca gaaacatgca acacgttaaa caaagttgat
     9001 tcctgggtgg agttatataa agttgcaaaa taagtgtagt ttgtcacgag atagtattcg
     9061 cccattaatt gcagatgggc aggaggcaca tcgatcacag caaacatcct ggtcgtgttt
     9121 tccttattaa aacttccctg cggattcacc ggaaaattgg tgagcgattg cttgaagttt
     9181 gtatcggcga tgtattcact tgccatgaat gaaggcgttc ggtttacatt ctgaaaaccc
     9241 agcagcaaag aaccgatgtt ctttttcaag gaacgtctca aactgatgta ggccgaataa
     9301 tctcccgcat aatgaccggt aacgtatagt ttaccagaag cttcaacatc gtataattgg
     9361 tttcgggttc tgttacgata ttcagcagcg gcgtagatat tggtgtacgt ttttatataa
     9421 ggattcagtt cgcctttcag ccattcatat ccggcattca atttcaaaaa ctggttgagg
     9481 ttattctttt gcggatatga aataatcgcg agatcatttg ttagattttg ccagttatct
     9541 gtaaaccgaa tggtgtctgt tcctgccggt aatgcaaaat gaaaataatt gttgtaatca
     9601 gaatctaccg ctgcaaaatc atgatactcg taactatttt ttgaatattc aaacgtgtgc
     9661 tgaaaacgta tgcgcggata gaataattta taagtgacag aatcggtcac aagcgagtcc
     9721 ttctgaccaa aatcgtagct ctgcctcatt agaaaaattc cttcctggta ctccgttcct
     9781 attgctatgt tggaaccgaa aacacttcga taggttatta cttcactgcc cagcttggta
     9841 ttggcgccaa aaggatcgtt aaacgagagg ctgtcaaggt tttgattttc ttttaaaccg
     9901 ccgttttctg aggcgaggat cttattgtga atatatacaa agtagtttga atatcgttta
     9961 ttgttcgttt gaaaaaagct gttcaatcga agcgttgaga tgtttgtgtt ttgatttttg
    10021 aaggcgccgg gcgaattgat aacgcggaat tcaaaccccg tattgaaatt acttttcctg
    10081 ttttgagtgt gaaagagatc tatcatttgt tcggcacggc tgccgatcat gtatatcgtt
    10141 tccgaataag gccgcgtagt ttgaaaaaac ctcgtgttct ccggtgtata acggtacaca
    10201 tcatacccat gaaagccagc atcgaagccg ggtgttagaa ttggatgaaa aacaaaaggg
    10261 cgcgctgctg aaccaaagtt gcccaggtca gtatacctcc acgaaacggg gaagcgcgtg
    10321 taaaaatcat tgatcgatga atcgatctta ttaatccgcg tagaatccca gtatcgaaaa
    10381 aaaattgtga ttgaatcttc gtaaatatcg cggtgcttga gtgtttgact ggcggtatct
    10441 acttttacgg gtctgccacg actgtcatat tgatattgtt cgccgggaat ggtgtcatag
    10501 acctgcgcgt aaataaccgc atgcaacatc gtgagaaaaa cgataactcc aacacgcttt
    10561 atcaaggtgc aaatacttaa agtttccaat gcgcaaagta atgtcaaaga tgtgaatgga
    10621 attacaattc acgtaatcgc aacacgctga gctatcatgt ccagaaaaaa attttcggaa
    10681 ttacagcacg ctttttttcc aggataattg catattgttg caaattcgat ttcatcatca
    10741 taatgtattt ccgtcaatga gaaaattatt tgcagctcta accgccggat gcctgatatc
    10801 agtacatggg agctcgcagg aaaagatcga tttatcagtc attcaaaaaa tcaaacaaga
    10861 ggaagccgat caatcccagg tcatgaagat cgccttcaat ctaaccgata gttccggccc
    10921 ccgtctcact gcatcgcccg gatttatgcg cgcagctaat tatgcaaaac aacaactgca
    10981 gcaatgggga ctggtgaatg taatgcttga tccatggggt gaattcggaa aaggctggca
    11041 gttagagaaa tcctatgtcg cgatgaaggc gccctattat cgaccgataa atgcattccc
    11101 aaaagcgtgg tgcgatggca ctaacggttt gcaaagcgcc gatgtgctgt tgatcactgc
    11161 aaaagattct gcaggtcttg atgaataccg tggaaaactc gcaggcaaaa tattaattgt
    11221 ggatcgcgat cttcaatacc accaaagttt tcagcccgat gcaaaacgat ttaccagggc
    11281 cgaactcgat tcgatgggca gcataaccac gattgaaagt gatacagctg cacaacgcag
    11341 gcgacgtgaa ttttttgcaa ggatgagccc gcctttgtcc atggtcaacg aactaaaaaa
    11401 aattgccaaa caagatggag cgatagcgtt gcttagcatg tcagcgttta gccatgacgg
    11461 tacattgttt gtgcaaggcg gaggctctta caaaacaaca gaccttcaaa attttcttga
    11521 catccagata gggcttgaag attatcttac tacacttaga ttactgaaag caggagtagc
    11581 tgtaaagcta gaagcggatg tgcaaacgac attctattca aacgacatga acggttataa
    11641 tgtgattggt gaaataccgg gcacaaatcc tgcactgaaa gacgaagtgg tgatgttagg
    11701 cgcgcacctc gattcgtggc agggagcaac cggcgccaca gataacggtg ccggttctgt
    11761 cgtgatgatg gaggctgtga gaatattaaa agcgctgaac atccaaccaa aacgtaccat
    11821 tcgaattgcg ttgtggagcg gcgaggaaca aggtttgtta ggatcaaaag gatacgtaaa
    11881 gaaaactttc ggcgatccta agacgatgca actattaccg gcacatcaaa aatttgatgt
    11941 ttatttcaac gtagataatg gtacaggaaa aataagaggc atttatttgc agggaaacga
    12001 cgcttgccgc gagatatttt ctaactggtt cgaagcattc ggcgattcat ccgcaaaaac
    12061 tgtcacgtta agtaaaacgg gtggcacaga tcatcaatca tttgatgctg taggtttgcc
    12121 gggcttccag tttatccagg atcctatcga atatgatacg cgaactcatc acagcaccat
    12181 ggattcatat gaccatttga tagccgacga tctaaaacaa atggcttccg ttgtcgcagc
    12241 ctttgtctat accgctgcgc aacgtgatga taagttaccc agaaaggaat taccgaaagt
    12301 cgtaccgacg cagtagccag ccttcagcct tcaaacaaga gcgatcattt ctttgagcaa
    12361 gacagtcaat tttggctcag cctccgcagc cgcagccaat acttcttcat gcgtgatctt
    12421 gttttcttcc tctcttattc ctatatctgt gatcacactc acagcaaaaa cctttatgcc
    12481 ggcatgcact gcagcgatca cttcctggac ggtactcata cctacggcat caccacctaa
    12541 tgctctgatc aatttgtatt ccgcacgcgt ttcaaaagaa gggccggtga ctcccgtata
    12601 aacaccttct tgcaatgtgt agcctaattg ctttgctacc gattttgctt ttgcgatgag
    12661 atctttgctg tatggttcgc tcatatcagg aaatcgcttt ccgatagcgt cttcattttt
    12721 tccaagcagc gggttgacgg taaaaaaact gatatggtct tttatgatca tgaggtcgcc
    12781 aactctaaat tctgtgttca ctccgcccgc ggcgtttgaa ataaacaaga tttctacacc
    12841 gagcatcttc atcacgcgca ccggaaaggt cacttgttgc gtgctgtaac cttcgtagta
    12901 gtgaaaccgc cctgccatta caatgatatt tcggtcggca atcttaccga agatcagttt
    12961 gccgctatgt ccttccacgg tgcttactgg aaagtgcggc aggtcttcgt agctgatctc
    13021 ggtatcgatc tgcatctctt gcgtaaaatt tcccagtccg ctgccaagga taattccaat
    13081 atgtggcgac gccgcatatt ttgatttgat aaaagccgtt gtttcggtga gttgctgcaa
    13141 aatattctta tccatagaac aagaacaaat atagatgatg catttttttg acgtcgtgta
    13201 tgattgaaaa gaaagcagcc ggttttcaaa agatgatacg acaagaaaaa ttttatcgca
    13261 ctacagcgca tgctaacgga aggtttctgc atcctgacga gttcaaataa cgatgtgccc
    13321 caggtggtgc aaaggcgcgt tgtgtgagga gcttctactt cacctctatc ggtgctgtcc
    13381 atcggaacga accccattcc attgccagcg ttccatgctt tgggtcgctt gaaacgatgg
    13441 agatcgtaaa cttttctacg ggtgttgtga gtgtctcaga attcattctt gatgtgccga
    13501 ggttttctga accgcgataa tccgttcccc attgaccagt ctgcttgttc acgatcaaat
    13561 caacgccgct ggtgtgcgga actgtccata atgtgtactt tcctgcaggc acctgcattc
    13621 cggcgagcgt tattggcacc gacgtcgtaa actgcgttgc ggcattcgct ccggtgcgcc
    13681 ataccctgtc gtacacaatc acatcgccca gcagtttgcg tccccgtgcc agtggccgcc
    13741 cataatcgac ggtgaacatc gcgtcgccaa tttgtgcacg cacagtatcc cttacgctta
    13801 tttctctaac cggaccagcc ttcatttcct gcgcctcaaa tctgtcagcg atgtctttta
    13861 cgtcaggtgg cgtcgcgaga cgggtcacat ttaccttata cgtagtccgc gcgcctgaat
    13921 aactcagcat atggtagttg gagtcaaccg tcgcttcgcc ggtgccggat agccagtcgt
    13981 gccagacctc catctttccg cctccaagtt gtcgcacatg ggctctgccc agaggaaacc
    14041 cgtcgaactc ccggtcaatg taaaattgcc gtaattcgac gtcaagcttc gacgcagtcg
    14101 catgcctcag tgccgcggcg aagtaaattt cgtaaaggct gtacatctgc gggacgtgtg
    14161 cgaccacgac accgccaccc gatgcaaaat cacgtttcac tgtgcccgta ccatccgtct
    14221 tcgaaatgtg cacggcatcg gcagtaacat cggcgatcac tttgcgttca cgctgatttg
    14281 ccggctcact cggtgtgtga atatccattg cgaggtgccg aatactgccg tcgtccgcaa
    14341 gttcgatcac tgcatgccgt attcgaacac ggggaaacct gtcaacttca tcgctagtta
    14401 atgtgttacc ctgtcgcgtg acgctctcaa ccgaaatggt atcgttgcca agtcgtgtga
    14461 tgaatccgta ctgttcggtt ggtgtagcag gcttgcaaga aattagtaac accgccgcgc
    14521 cgagaaacaa ccataacaga gaatttcgat tgtacatgga agaggtataa atattttaga
    14581 agacaacgcg ccgaatttag cacaggcgcg ttttcatgtt tgtttttgaa gaacaaagcg
    14641 ccgcgcatca aatgcggcca tagttgttaa ttcattgtcg taaatatcat tgtttatttc
    14701 gagtttgact tgccagccgt gtaatttctg caactcctca cgtcaagtga atgcaaacga
    14761 tcacagttca tggacctaca gccagaaagg aaaaaatgta ccttgtgtca attcgtgata
    14821 tgatcgcaaa aacaattctt tccattccat tgattgcagc gatgtgcatg ctaacatcgc
    14881 atgcacctgc gacgcatccg cttcggcccg cagacacggc aagtgtaaag cgatatctat
    14941 atgtggctgt gccgggcatc cgtgattatc taggctatgg cggacatggt attcttgttt
    15001 ttgacatcga ccatgatcat cggttcgtta agcgcatacc aacaaaagga tttcaccccg
    15061 acggcagtcc ttcgaatgtg aagggaatag cagtcagtat tccactcaac agtgttttta
    15121 tcagcaccat tgaatcgttg caacgcatag accttgccac tgacaaagtg gtttgggaaa
    15181 aaacttttga aggtggctgc gaccgcatgg ccatttctcc tgatggcaaa acaatgtacc
    15241 tcccgtcttt tgaaggacct ttttggaatg tagtggattg cgaaacaggt aacatcatca
    15301 aaaagatcga tgtatacaaa agagcgcaca ataccattta tgggccgtca ggtcgaaatg
    15361 tttacctgga tgatattgct tccgcgtggt tatatgtagc ggatgccgaa aaaaatcagc
    15421 ttgcaaaaaa agtgggccca ttcagcaatt tcgtgcggcc ttttacaatc aacgctaaag
    15481 aaacgctcgc ttatgttacc gtggatagtt tgctcggttt tgaagtaggt gacctcacaa
    15541 gcggaaaaaa gatttcacat gtggaagtga aaggatggga tgccggtccg gtaagaaggc
    15601 atggcaaccc aagtcatggc attgcattaa cgccggatga aaaggaacta tggttagcgg
    15661 atggacacaa tatgcgctta cacgttttta atgctgatgc gccttaccag caattaacca
    15721 cgataccgtt acgggatatg cccggatgga taacgtttag tattgacggc aattttgttt
    15781 atccttccag tggtgaagtt atcgaagcaa aatcgaggaa aataatcact gttctgcagg
    15841 atgaattcca taataatgtg ggcagcgaaa aaatggtaga gattgatttc gcaggaaatc
    15901 aagcggtgaa cgcaggcaac cagtttggga tcggtggatt acggtaacaa gtaattccct
    15961 ttttcttttt gaaatcgacg cgactacgat cataaaaaat gtcctttaat attacttgaa
    16021 ggcattcatg gttgacagta aggttgcaga cagcgatcat ccgggaatat tcagtggctt
    16081 aaacaacaac cacatcccaa gcgcaatttc atcaatagcg attgggccgt aacaagcggg
    16141 gataatgatt ctttctgttc cagggaagat aattatcgta aactggctaa gcaaaagtaa
    16201 cagcgaagca aacatgcccc atacggctaa tgctttcgga atatatgcag acttgaatag
    16261 caggtaatta aacaatgacg aacccagccc taaaaatatt gcaacaacat taaaggccag
    16321 ggcatatgtg taatgcatta ttgacaaatt ctcgagctga tttgaatcaa atgctttcag
    16381 atggtcagca tcggtgatgt attgcatggc gacgtacgaa tatattattg caacgcaggc
    16441 gatcgtcgtc tccactaatc tgaacaaaag cgcaagcaag gccacgtttc tattaacacg
    16501 ctttagcaac gtataaagag cccatatcag cactacatct aaagcaaaag tgattaagtt
    16561 gttcgcgatg ccgatacgat agagtcgttc gttcgctatg atgttgcttg ctgttttcga
    16621 agcgtctccg ctcacaataa gagtggatgg gaagcgtaca taaatctcag cgaagagccc
    16681 ggtagccatc gcaacgagga ataacagtcc tgcaagtttt cctgcttttc gttgcagtgc
    16741 gataacattt tgattttcca tttcgtagtc gtgcattatt ttcaaacgaa tgcatgacga
    16801 agctaacagt aaatacagac gctttactgc attgtctact gactacaacg aatggtcaac
    16861 gaacaacaga aaatgtatcg acctgtcatt agctatctga agtaatcggg acaattccca
    16921 ggcgattagt aatcgacatg gattgcatgg atgagtcgat ctttgaattt ttgagctcag
    16981 ttgcaatcgc agaaaaatgg tgcaagatga agacctgagg gagtattttg cagactatgg
    17041 cgagtccgat taaattcgga tgcaggttct gtcaattctt tttttcatac gaccgcaaaa
    17101 ccttgaacgt tatacctccg ctttcagatt ttccgatgtc gtattgtatc acacgtgtaa
    17161 tgccggtggc agtatcggcg ttcccggttt tataaacggg aaagctctgc attacagtgc
    17221 ccataagcgt cgtaaacaca tcatgacctt tataaccttc acgtagagct gggttgctat
    17281 agatgtcggg caaagctgca ggcgtcaaag aatttttccc ggcagaaaca acggctgccg
    17341 cattcccgat ttccccgtcc acgccactgt aaatgcataa gatcacgtcc gggtagccat
    17401 cagcgttaag atcgtccagt aagatcttac gcaacgtccc ctttagggtg aacgccatat
    17461 ttttcacatc tttaccaaaa cctttcggag atatcgacac ctcgtttgaa ctcgggcttt
    17521 tattgttgca taccactcta tatcccaccg caccctggct tacgacagta tcaatttttt
    17581 tatcctgggc ggatatgcca gcagatacta acaaagctgc aaaaagcagc gcagaaactc
    17641 tttcactcat tgtacaaatt aaggcaatta atcaatcccg acacgaa
//
LOCUS       DASQJI010000062         6152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1079169,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000062 DASQJI010000000
VERSION     DASQJI010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6152
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079169"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VEV83_02070"
     CDS             complement(<1..248)
                     /locus_tag="VEV83_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYK43925.1"
                     /translation="MDSLREQWLILISTPLYFIIIGIELLLSHISHRKSYTIKDTFAN
                     VYLMLLNSGIDLAFRIVYLAVLQYFYVRAFMNWNNAFA"
     gene            285..749
                     /locus_tag="VEV83_02075"
     CDS             285..749
                     /locus_tag="VEV83_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HYK43926.1"
                     /translation="MNDWQKQSASHQKQYKQLLQRADKNRVLKQLPSLHEEAFSKIDC
                     LNCAACCKNYSPRFKTPDIKRISRHLRMKEGDFIETYLRIDEDGDYVVKSTPCPFLGG
                     DHFCSIYEVRPSDCVRFPYTNEDVVFKRPAITLKNSTFCPIVVHVLEGLLEK"
     gene            840..2288
                     /gene="sufB"
                     /locus_tag="VEV83_02080"
     CDS             840..2288
                     /gene="sufB"
                     /locus_tag="VEV83_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HYK43927.1"
                     /translation="MSEMIATLEQTALSDYKYGFVTDIEADEAPKGLDEGTIRFISQK
                     KNEPSWMLDWRLKAFRHWKTLDHKEPQWANVKYPAIDYQDIKYYSAPKQKPKLNSLDE
                     IDPELRRTFEKLGISLDEQKRLGGIAVDAVIDSVSIATTFKEQLAEQGIIFCSITEAI
                     HNHPELVKKYMGSVVPMTDNFFAALNSAVFTDGSFCYIPKGVRCPMELSTYFRINAEN
                     TGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELIALDNAEIKYSTVQNWYP
                     GDKQGKGGIYNFVTKRGICGRNSKISWTQVETGSSITWKYPSVILKGDNSTGEFYSVA
                     VTNNYQQADTGTKMMHVGKNTRSRIVSKGISAGHSNNSYRGLVQVGKNAHNSRNFSQC
                     DSLLLGDRCGAHTFPYIETKNSTSIVEHEATTSKIGEDQIFYCNQRGLDTETAVALII
                     NGFAKEVMNQLPMEFAVEAQKLLAISLEGSVG"
     gene            2373..3134
                     /gene="sufC"
                     /locus_tag="VEV83_02085"
     CDS             2373..3134
                     /gene="sufC"
                     /locus_tag="VEV83_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HYK43928.1"
                     /translation="MLTVHNLHASIEDKKILNGIDLKIKSGEIHAIMGPNGSGKSTLA
                     SVLAGRAEYEVTDGTVEFMGKDLFEMAPEERAREGLFMAFQYPVEIPGVSTTNFIKTA
                     VNETRKHRGLEPLDAVAFLKLMKERMKLVHIDQSLLSRSLNEGFSGGEKKRNEIFQMA
                     MLEPKLAILDETDSGLDIDALRIVADGVNTLRRKDNAVLVITHYQRLLDYIVPDFVHV
                     LYNGRIVKSGGKELALELEEKGYDFIRQEAQVETV"
     gene            3164..4465
                     /gene="sufD"
                     /locus_tag="VEV83_02090"
     CDS             3164..4465
                     /gene="sufD"
                     /locus_tag="VEV83_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HYK43929.1"
                     /translation="MSLVNTIQEKYSEIQSKNGSALLHSMREKAYDAYSRMGIPTQRH
                     EEWKYTRLNALVNKDFRFSNPALPSAATIETVKLQQGPAAQLFFANGTFIKEISSFDE
                     DAIVVLPLLEAAAGEYKRYVEKHLGHSSKYMKDGMNALNQAFVTNGLFVLLKKNKVLE
                     QPVYVYHITDTIEDNVFVQPRSLFVVEENAQVQLVETYYNKGQHESFTNEVIEIAVYE
                     NARFEYYKVQDQEPNCHHVGTTHIQQVGKCFTHCVTVTINGGTIRNNMNMILEAANNE
                     GHLYGLYMVNGKTHVDNHSIVDNVMPNCFSNEFYKGIMDGNSTGVFNGKIFVRQDAQK
                     TNAYQSNKNVLMGNSASVNSKPQLEIFADDVKCSHGCTVGRLDDEALFYLRTRGIDEK
                     NAKALLLRAFAEDILEQVKPQPLRKYLEQKINERLDIERLD"
     gene            4537..5781
                     /locus_tag="VEV83_02095"
     CDS             4537..5781
                     /locus_tag="VEV83_02095"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HYK43930.1"
                     /translation="MISTVPHIKSYNVAEIRKQFPVLERMVKGKRLVYFDNAATAQKP
                     KVVLDALINYYEHYNANIHRGIHSLAEEATAAFEATRDTVREFINAKYREEIIFTRGV
                     TEGINLVSSTWGRQNIKEGDEIIISAMEHHSNIVPWQILCLEKKAKLKIIPINDRGEL
                     VMDEFKRLFTSKTKLVSIVHASNSLGTINPVEEIISIAHQHNVVVLVDGAQSSVHLDI
                     DVQEMDCDFFVLSSHKIYGPTGVGVLYGKKEILDEMPPYMGGGEMIKEVTFDGTTYND
                     LPYKFEAGTPNIADTVAFKAALDFVNSLGKENIRTHEEQLTRYAMSELSKIDGVRLIG
                     TAKQKTSVVSFIVEGVHPQDIGILLDNYGIAVRTGHHCCQPLMNRLEIPGTVRASFGM
                     YNTKEEVDELVKGVRKVVKMLK"
     gene            5822..>6152
                     /locus_tag="VEV83_02100"
     CDS             5822..>6152
                     /locus_tag="VEV83_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HYK43931.1"
                     /translation="METVQTIQETEDEIVDEFSLFDSWEDKYEYIIDLGKKLKPLEAE
                     FKIEGNKIKGCQSQVWLIADENNGRIYFKADSDAVIVKGLVSMLIRVLSGHKSDEIIN
                     AKLDFINK"
BASE COUNT         1963 a         1183 c         1487 g         1519 t
ORIGIN      
        1 taagcaaacg cattgttcca attcatgaac gcgcgtacat agaaatattg caggacagca
       61 agataaacta tccggaacgc caggtcaata cctgaattca gcagcatcag gtaaacatta
      121 gcaaacgtat cctttatcgt atacgatttg cgatgactga tatgcgagag cagcaactca
      181 atgccaatga taataaagta caaaggcgtc gagatcagaa ttaaccattg ctcgcgtaat
      241 gaatccattt aagcgtttaa gtttgcaaac ttaatataag acttgtgaac gattggcaaa
      301 aacaaagtgc atcacatcaa aagcaataca aacaactgct gcaaagggct gataagaaca
      361 gggtgctcaa acaattgcct tcgttgcacg aagaagcttt ttcaaaaata gattgcctca
      421 actgcgcagc ttgttgtaag aactattctc ctcgttttaa aacgccggat ataaaacgca
      481 taagcaggca tttgcgaatg aaggaaggag actttatcga aacgtatttg cggattgacg
      541 aagatggcga ttacgtcgta aaatcaactc cgtgcccctt cctcggaggc gaccatttct
      601 gcagcattta tgaagttcgt ccctcggatt gcgtacgctt tccatatacc aacgaggacg
      661 tagttttcaa gcgtccggcc attacattaa aaaattcaac gttctgcccg atcgttgttc
      721 atgttcttga aggtttactc gaaaagtaaa taccccttag gtgttttcta aaaacggaaa
      781 agtttccctt tcacttctat ttatactttt ttgtacaaat tgaggcgtaa atttgcagaa
      841 tgagcgaaat gatagcaacc ttagagcaga cggccctaag cgattacaag tacggatttg
      901 taactgacat tgaagcagat gaggctccga aaggccttga tgaaggtaca atccgattca
      961 tttcccagaa gaagaatgag ccgtcatgga tgcttgactg gcggttgaaa gcttttcggc
     1021 actggaaaac ccttgatcac aaggaacctc aatgggctaa cgtaaaatat cccgctatcg
     1081 attaccagga tatcaaatac tactcagctc cgaagcaaaa accaaagctc aacagtttgg
     1141 acgaaataga cccggaattg cgcaggactt tcgaaaagct tggaatttcg ctggatgaac
     1201 aaaaacgatt gggcggaata gcggtggatg cggttataga cagcgtttct atcgccacca
     1261 cttttaaaga acaactggct gaacaaggca ttattttttg ctcaattacg gaagccatac
     1321 ataaccatcc tgagttggtg aagaaatata tgggctcggt ggtcccaatg accgataact
     1381 tttttgccgc actaaattcc gctgtcttta cggacggttc attttgctac atcccgaaag
     1441 gcgttcgttg cccgatggaa ctatcgacct acttcaggat taatgccgaa aataccggtc
     1501 aatttgaacg gacgttgatc gtggctgacg aaggaagcta tgtaagttac cttgaaggct
     1561 gcacggcgcc gatgcgcgac gagaaccaat tgcacgccgc ggtcgttgaa ctgatcgcgc
     1621 tcgacaatgc ggaaataaaa tattcaacag tgcagaactg gtacccgggc gataaacaag
     1681 gaaagggcgg catctacaat tttgtcacga agcgcgggat ctgcggaagg aatagtaaga
     1741 tatcatggac gcaggttgaa accgggtcgt ctattacatg gaaataccca agcgttatac
     1801 tcaagggcga taattctaca ggcgaatttt attccgtcgc ggtgacgaat aattaccagc
     1861 aggctgatac gggaactaag atgatgcacg ttggaaaaaa tacccgcagc cggatcgtga
     1921 gcaaaggcat ttctgcgggc catagcaaca atagttaccg cgggctggta caggttggaa
     1981 aaaatgcaca taactcgcgc aatttctcgc agtgcgattc attgttgctc ggcgacagat
     2041 gcggcgccca tacgtttcct tacatcgaga caaagaacag tacctccatt gtagagcacg
     2101 aggcgacgac cagcaagatc ggtgaggacc agatattcta ttgcaatcaa cgtggcctcg
     2161 atacggaaac cgctgtagcg cttatcatca atggtttcgc aaaagaagtg atgaatcaat
     2221 tgccgatgga atttgcggtg gaagcacaaa aattgctggc aattagttta gagggaagcg
     2281 tggggtagaa aggctccagg ttgcaggttc caggttgctg gtttcaaagt ttcaagatca
     2341 ataaagaaaa aagtaaaagg ataaatcagt ttatgttaac ggttcacaat ttacacgcgt
     2401 cgatagaaga taaaaagatc ctaaacggaa tcgatcttaa aatcaagtca ggcgaaatac
     2461 acgcaatcat gggcccgaac gggtcaggta aaagtacgct ggcatcggtg cttgccgggc
     2521 gcgccgaata cgaagtaaca gacggcacgg tggaatttat gggcaaagat ctttttgaaa
     2581 tggcgcctga agaaagagcg agggagggtc tgttcatggc atttcaatat cctgtagaaa
     2641 tccctggcgt tagcacaacg aactttataa agacggctgt gaacgaaaca cgtaaacacc
     2701 gcggtcttga accattagat gctgttgcct ttttgaagtt gatgaaggaa agaatgaagc
     2761 ttgttcatat agatcaaagc ttattaagca ggtcgttgaa tgaaggtttc agcggaggtg
     2821 aaaaaaagcg taacgagatc tttcaaatgg cgatgctcga accgaagctt gcgatcctgg
     2881 atgaaacaga cagcggtctc gacattgacg ccctccgcat cgtcgctgat ggcgtgaata
     2941 ctttgaggcg caaagacaac gctgttttgg tcatcacgca ttaccagcgc ctgcttgact
     3001 acatagttcc tgattttgtg cacgtattgt acaatggacg aatagtaaaa tccggtggca
     3061 aagaactggc attggagctt gaagaaaaag ggtatgattt tattcgccag gaagcgcaag
     3121 ttgaaacagt ataaaagaga attcgaaaag tcaccgaaat aagatgagtt tagttaatac
     3181 aatacaagaa aaatattccg agatacaatc aaaaaacgga agtgcgttgc tgcatagcat
     3241 gcgcgagaaa gcctatgatg catatagccg catgggcata ccgacccaac gtcatgagga
     3301 atggaaatat acgaggttga atgcgctcgt gaacaaggac tttagatttt caaacccggc
     3361 attgccgtca gcagcaacga ttgaaacggt gaaattgcaa caaggtcccg ctgcacaact
     3421 gtttttcgca aacggaactt ttataaaaga gatctcttcc tttgatgaag atgcaatcgt
     3481 cgttctgcca ttgctggaag ctgcggcagg tgagtataaa agatatgtag aaaaacatct
     3541 tggccacagc agcaagtaca tgaaagacgg tatgaatgcg ctgaaccagg cgttcgtcac
     3601 aaacggcttg tttgtgctgc ttaagaaaaa taaagtattg gagcagcccg tgtatgtgta
     3661 tcatatcacc gatacgatcg aagacaatgt tttcgttcag ccgagaagtt tatttgtggt
     3721 tgaggagaat gcacaagttc aactagtcga aacatactat aacaaggggc agcatgaaag
     3781 ctttacaaac gaagtgattg agatcgccgt gtatgagaat gcaaggtttg aatattataa
     3841 ggtgcaggac caggagccta attgtcatca tgtaggcacg acacatattc agcaggtggg
     3901 taaatgtttt acgcattgcg tgaccgtcac cattaacggc ggaacaatac gtaataacat
     3961 gaacatgata ctcgaggcgg caaataatga aggccatctt tacggtttat atatggtaaa
     4021 tggaaaaacg cacgtcgaca atcatagcat cgttgacaac gtgatgccca attgtttcag
     4081 caacgaattt tataaaggca tcatggatgg caattcaacg ggcgttttca atgggaaaat
     4141 ttttgtgaga caagatgcac agaaaacgaa tgcatatcag tcgaacaaaa atgtattaat
     4201 gggtaattct gcatctgtca attcgaagcc gcaattggaa atttttgcag acgatgtaaa
     4261 atgttcgcac ggttgtaccg tggggcgcct ggatgacgaa gcattatttt atctccggac
     4321 aagaggcatc gatgaaaaga atgcaaaggc cttgttatta cgcgcttttg ctgaagacat
     4381 tcttgagcag gtaaagcctc agcccttgcg aaaatatctt gaacaaaaaa ttaatgagcg
     4441 gttggatata gagcgtttgg actaagagaa tattgtttgg ctaagtccgt ttaaagaaaa
     4501 aatttaatga tccctgccta aaggcgttaa tgattcatga tctcaacagt tccacatata
     4561 aagtcatata atgttgcgga gatacgcaag cagttccccg tgctcgaaag aatggtaaaa
     4621 gggaaaaggc ttgtgtattt tgataatgca gcgacggcgc agaagccgaa ggttgtattg
     4681 gacgcgctta taaattatta cgagcactac aatgcaaata ttcaccgcgg aattcattca
     4741 ctggcagaag aagcgacggc tgcgtttgaa gcaacaagag acactgttag agaattcatc
     4801 aatgccaaat atagggagga gataatcttc acaagaggtg tcaccgaagg tatcaatttg
     4861 gtttcgtcaa catggggcag gcaaaatatt aaggaaggag atgagatcat catatctgca
     4921 atggaacacc attccaatat cgttccctgg cagatacttt gtttggagaa gaaagcgaag
     4981 cttaaaataa ttccgatcaa tgacagaggt gagttggtga tggatgaatt taaaaggctc
     5041 tttacctcaa aaacaaaact tgtttccatc gttcatgcgt ctaattcact cggcacgatc
     5101 aatccggtgg aagaaattat cagcatcgcg catcagcaca atgtagtcgt attggttgat
     5161 ggagcgcaat catcagtcca tcttgatatc gacgtgcagg aaatggattg cgactttttt
     5221 gttttatcca gtcataaaat atatgggcca accggcgtag gtgtccttta tggcaagaaa
     5281 gaaatcttag atgagatgcc tccgtatatg ggtggcggtg aaatgatcaa ggaggttact
     5341 tttgacggta caacgtataa cgacctgcca tataaattcg aagctggcac tccaaatatc
     5401 gcagacactg ttgcatttaa ggctgcactg gattttgtga attcgctcgg caaggaaaat
     5461 atccgtacac atgaagaaca gttgacgcga tatgcaatga gcgaattgtc aaaaatagat
     5521 ggagtaaggc tgatcggtac agcgaaacaa aaaacaagtg ttgtttcgtt catcgttgaa
     5581 ggcgttcatc cgcaggacat cggaatattg cttgacaatt atggcatcgc tgttcgcacg
     5641 ggccatcatt gttgccagcc actaatgaac aggctggaaa taccgggtac agtgcgcgca
     5701 tcctttggca tgtacaacac gaaggaagaa gttgacgagt tggttaaagg agtgcggaag
     5761 gtggttaaga tgttaaagtg aatccggcaa ttttgaaatt aggaaattgg gaaacgatca
     5821 aatggaaaca gtacagacga tacaggaaac ggaagatgaa attgtcgatg agttttcttt
     5881 gtttgatagc tgggaagaca aatatgagta catcatcgac ctcggaaaaa aattaaagcc
     5941 gttagaagct gaatttaaaa tagagggaaa caaaataaaa ggttgccaga gccaggtttg
     6001 gctgatcgca gacgagaata acggaagaat ttattttaaa gctgacagtg atgcagttat
     6061 tgtgaagggg ttggttagta tgctgatcag agttttatca ggccacaagt cggacgagat
     6121 cataaacgcg aaattggatt ttatcaataa ga
//
LOCUS       DASQJI010000063        13579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1386647,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000063 DASQJI010000000
VERSION     DASQJI010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13579
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386647"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VEV83_02105"
     CDS             complement(<1..350)
                     /locus_tag="VEV83_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HYK43932.1"
                     /translation="MNLHEYQAKELLKKFNVPVQEGYACSAVHEVEEAYRQIKNQTQN
                     NFAVVKAQIHAGGRGKGKILGTEQRGVAVGKSLEEVATIAGNILGGTLVTVQTGPAGK
                     KVNKVLVAQDVYYPG"
     gene            complement(408..710)
                     /locus_tag="VEV83_02110"
     CDS             complement(408..710)
                     /locus_tag="VEV83_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43933.1"
                     /translation="MGLFDKKNDGGEHKGGRFKQAFEAAKPMLRLSPDQENQVMRIFN
                     EFRDERKDLKNSSREDAPEAIRAARKETKEKIMSVLTEDQKRILQENLQKWKEQAD"
     gene            complement(863..1621)
                     /locus_tag="VEV83_02115"
     CDS             complement(863..1621)
                     /locus_tag="VEV83_02115"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HYK43934.1"
                     /translation="MSVAERYYCEACDSEVKGFHRFCHHCGEYLGYDATRISLFNHSK
                     LQSAFKFFIIYLFVCLVVHFTNWFDEYDRLFWVEILLGSVTLYFVWMNFGEIKPVLRF
                     RNFSVVRLTGCITLAAFMSFIVNIIVSKLNISFFGTDASYYGRYSVYTIPALIMVYSI
                     AINPAIFEELAFRGVIYNYLNSFLDERLVVIVTAFTFAIMHLNFISLFWLVPFGILVG
                     SMRRRFGTIWYGVIFHFVFNFVAVLFDLYKQGHL"
     gene            complement(1618..2229)
                     /locus_tag="VEV83_02120"
     CDS             complement(1618..2229)
                     /locus_tag="VEV83_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43935.1"
                     /translation="MIQVQKRMSHFRKLPSAQKINLLPDVLAKPQADVCAHCNYVNKT
                     DYSFCTNCGYPVHNKLLVDIYHKRLQHRTDLLYKAESSVLVARIVLYIMASFLLLGIF
                     FVFSESSEKYFMVILAVILSALFYFLAFWSRSNPFTAMLTAFIILITFSAINIFGKLV
                     DSFTTLSGVIGMMLCLALLFVVLKGVQGAYRVSLIKEELQTKL"
     gene            2335..2562
                     /locus_tag="VEV83_02125"
     CDS             2335..2562
                     /locus_tag="VEV83_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43936.1"
                     /translation="MRKLVVLIACLFFFTKGPSLFGQCSICTKTASQLGEKPGKGLNA
                     GIIYLMLTPFAVGGYIGYRWWKREKQLMNEE"
     gene            complement(2760..3650)
                     /gene="meaB"
                     /locus_tag="VEV83_02130"
     CDS             complement(2760..3650)
                     /gene="meaB"
                     /locus_tag="VEV83_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HYK43937.1"
                     /translation="MLHPTIKQIQQGDMKALARAISLIENESSGYGELLKNLPYSEKK
                     IIGITGPPGAGKSTLTDALIGEFVKNNETVCVLCVDPSSPFHHGALLGDRIRMQSWYN
                     NPAVFIRSFSARGSMGGLHPKILEITELVKAAPLDRIVIETIGVGQSELEIAALADTT
                     VLVLVPEAGDEIQAMKSGLIEIADIFVVNKADRPGAAEFMKNLMQTVAHGHDEKETPV
                     IQTIATEKKGIDNLLEKIILHQQGLRSNEKKIAALADKAYVLIQQKRMRNVNRQQLSQ
                     QLRDAFDGKDFNLYAFVEQF"
     gene            complement(3759..4820)
                     /locus_tag="VEV83_02135"
     CDS             complement(3759..4820)
                     /locus_tag="VEV83_02135"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HYK43938.1"
                     /translation="MHDDKKILVDVERMRYPNTGLYYYCLHLANALQQQQARHKARLG
                     FYLRKETKSLFPTNNLNRVQYSLDKHHMSFAGKFDVWHCTFQGSNYFPASSKAKIVFT
                     VHDLNFLHEKLPGRKQRKFLDALKKKVDRADVIITISAFVKTDLQANLEADDKKIKII
                     HNGCNINTDSAASTPAVIPQTPFIFTIGAITEKKNFHVLPGMLLKNDHCLVIAGITHN
                     EQYRQKIVETAKRLGVHERVMFTGGISEGEKYWYLQNCVAFAFPSLAEGFGLPVIEAM
                     HFGKPVLLSKATSLPEVGGNYAYYLDSFEPSYMSDELQHALDDHAVNHRAAKIIEWSE
                     QFNWDVTAQKHWEIYESLL"
     gene            complement(4824..5618)
                     /locus_tag="VEV83_02140"
     CDS             complement(4824..5618)
                     /locus_tag="VEV83_02140"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HYK43939.1"
                     /translation="MRINVSKFLNAVSNLRNWPEYVFHKREVQQRLLHFVTKPVPVKL
                     EVNAENYPVFKEIFIEDFYKTTKLFSNLPAKITVIDIGANEGFFAALVLSKVKDAVVY
                     AFEPLPSNVRKIERLKEINPFAENKIIIDAKAVTDGSSQTVELFTQEESAESSIASIY
                     REFDARNLKSLHVPAITLRNIIDDNKLAEVNLLKLDCEGAEYEILYSTDAIALKKIKR
                     MLIEVHPLDDAKRNEKYLASFLSTNGFTTETTPFHNGCYSMIAEQN"
     gene            complement(5608..6645)
                     /locus_tag="VEV83_02145"
     CDS             complement(5608..6645)
                     /locus_tag="VEV83_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK43940.1"
                     /translation="MKHTFSNILLSRTDSIGDMVLALPMAKALKDQFPDMKVYFLGRD
                     YTQPVVEACSYTDGFIKLEDFLQTQTLINGEPVSAIVHVKPFAPVAKRAKKLGIEWRV
                     GTNHRVYHWNTCNKLINLSRKKSDLHEAQLNLKLLEPFGIDKEFSLQDISDSYGLTNL
                     DPLRKEFASLIDRTKYNLILHPKSRGSAREWGLQNFIRLVKELDPARYKIFVTGTTAE
                     RQILQPLINEISHKVTDITGAMELGQFISFISACNGLIAASTGPLHLAAAMGKDAFGI
                     YAPIRPLHPGRWGPIGKCAEVFVLDKECHDCAKNRAPCHCIAEVHPAWVKASLDSKAD
                     ALHKTEFIHAN"
     gene            6685..7377
                     /locus_tag="VEV83_02150"
     CDS             6685..7377
                     /locus_tag="VEV83_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HYK43941.1"
                     /translation="MEVHNTGIFTFARIMTNFIPIFPLELVVYPGEKVNLHIFEERYK
                     QLIAECNKDKKLFGIPAVIKNKISETGTLVAIEDIVKQYDDGRLDITTKGVSVFRILE
                     VIDSIPAKLYSGAIVKHLSADENGTSKHVQKVIDAIRELHVLLHVKKDFNKPDAELKS
                     FDIAHHAGLSLEEEYELLNLLREDQRVEYLRRHLKKIIPLVAGVENLKKRIQLNGHFR
                     ELKGFDPGIGKK"
     gene            7383..8108
                     /locus_tag="VEV83_02155"
     CDS             7383..8108
                     /locus_tag="VEV83_02155"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HYK43942.1"
                     /translation="MQTTLCLDFGNTRLKYAVFNDDELKEVLVLENDDPSSIEKVLQQ
                     YQPSKSILSSVIDHNPEIENILAVKTRFHKLSYQSKLPFRTPVGKPETIGADRLALVA
                     GAVHFYPNQHNLVIGLGSCITYNFVNKFHEFLGGSISPGLEMRFKAMHTFTAKLPLAK
                     PNANFPLIGYDTNTNLLSGVILGITHEIEGIIDEYGLRYSNFNVHLTGGDMGFFVPHL
                     KKKIFASPYLIFKGLYAISETNG"
     gene            8083..9462
                     /locus_tag="VEV83_02160"
     CDS             8083..9462
                     /locus_tag="VEV83_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43943.1"
                     /translation="MQLVKPTANYIFFFLLLFFSHVAFGQENSPFSRYGLGDLYPQQH
                     ITSRGMGGVSAAYTNYQALNTLNPASYGSLSWVTYDFSLSIDDRTLRSADPVAKYNST
                     NFLPSYLQLGIPLNRKRTALVFGLRPYTRVNYSVEQSKTLFYDSLGVTDSVHNLYEGD
                     GGMNQVFAGIGKTWAGKNLSMSLGLNAGYEWGSKNISTKINFPADSLRYYMSNSTDTS
                     HFWGVFFNPGVQFNLKLKQGINAYTKNRESYHLTIGGSGTFEQELNVSKIITRETFYY
                     TDGGAMRQYDSILKIADTAGKINVPLTYTAGFMLTKTIGNTAFELNKWSIGADYTSTK
                     WTKYRYYGLPDQLSDSWFLRAGIEFSPSPLTNGSVLSRGTYRVGYYTGQDYINADGNG
                     YKVHAYTVGFSFNLRRFRSYDRQFTTINTAVEVGKRGSTVNNITENFFKFSLGLSLSD
                     VWFIKRKYD"
     gene            9494..10027
                     /gene="lptC"
                     /locus_tag="VEV83_02165"
     CDS             9494..10027
                     /gene="lptC"
                     /locus_tag="VEV83_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HYK43944.1"
                     /translation="MAFLGCCFILSCANNYQEVQNLAKKPVPVDKATNVDSYLSQDGI
                     VKARLTAPLMTRTVLADTPKTEFPNSLHVDFYDTTKIQSRLFAKYGLYYTNKRLVYLR
                     DSVIVFNMQGDTLRCEELWWDQNREQIYTNVPVHIRKPDEKIDGTGLVADQNFRTWTI
                     TNAKGPINVPDSTLPAN"
     gene            complement(10063..11544)
                     /locus_tag="VEV83_02170"
     CDS             complement(10063..11544)
                     /locus_tag="VEV83_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HYK43945.1"
                     /translation="MPQNDPQRQQLRVLKKLLHKARFTEFGQQYRFDEILLQQDPIKK
                     FQQNVPLYNYSKIYKEWWHRTLEGMPDVCWPGKIKYYALSSGTSEAASKYIPITNDLL
                     KGNRVAMIRQILTLRNYEDLPMRSIGKGWLMLGGSTALQKGAGYYAGDLSGITAKRVP
                     FWFQPFYKPGRKIARQRNWTRKLNEIVKKAPEWDIGFVVGVPAWIQMCMEMIIERYKL
                     NTIHDIWPNLAIFVHGGVSFQPYKKGFEKLVDKPLIYVETYLASEGFLAYQDRPHASG
                     MRLITNEHIFHEFIPFDDKNFDANGDPAGHPQVLTIGEVEEGKDYAILVSTSAGAWRY
                     LMGDTIRFTDKKRCELVITGRTKHYLSLVGEHLSVENMNRAIEMASAEMNISIPEFTV
                     AGVPYGNLFAHHWYVACDDPVNAETLRHKIDDNLKQLNDDYATERKHALREVRLDVLS
                     EKTFIQFMRKMGKVGGQHKFPRVLKGKILEDWRKFLKEQLVER"
     gene            complement(11645..12805)
                     /locus_tag="VEV83_02175"
     CDS             complement(11645..12805)
                     /locus_tag="VEV83_02175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK43946.1"
                     /translation="MQVSIIIVSYNVKYFLEQCIYSVEAACKNLNAEIIVVDNASSDG
                     SADYLSSNFPQVTFVKNEINHGFSRANNKGLSLASGDCILFLNPDTIISENSITACLD
                     FLSAQQDAGAVGVRLVDGSGNFLPESKRSFPSPMASFYKLTGISLLFPRSPVFNRYAL
                     GNLHEDEIAEVDVLPGAFFMARRQMLTELNGFDENFFMYGEDIDLSYRIKNSGCKNYY
                     LGTTVAIHFKGESTQKDRPAYRKNFYHAMKIFVDKHYSKASATFLKTAISATTFFSSF
                     KRTIQKNNDLGSAHFLLVGADDDIQSAEKILLPLHYSFEKIHSLSQLHQTSKFKHQTS
                     NLVFCTGKLSYGETIDFVTRNNNRFSYYWHKGGSKSITGSSSSNTMGKIYHL"
     gene            12897..>13579
                     /locus_tag="VEV83_02180"
     CDS             12897..>13579
                     /locus_tag="VEV83_02180"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HYK43947.1"
                     /translation="MLKQVLLQATEAAAAVIKDYSTRSFSISSKEGINNLVTEVDHKS
                     EEVIFAIIKQNFPGHQILSEESGELVQDSTYKWIIDPIDGTVNYANHIPLCCVSIGVE
                     IEGKIELGAVYNPFINEFFFAQRGFGSTLNDARIHVSTTEHVLNSCLVTGFPYTYLDM
                     PNGPLEVFSKFIRKGVPVRRLGSAAMDLCWVAAGRFDGFYEHKLNAWDSAAGFLIVEE
                     AGGKVTDMTG"
BASE COUNT         3739 a         3066 c         2947 g         3827 t
ORIGIN      
        1 cccggatagt acacatcctg cgccaccaaa accttattca ccttttttcc cgctggtcct
       61 gtttgcacgg tgaccagtgt accgcccaga atatttccgg caatcgtggc aacctcttca
      121 agacttttgc cgacggcaac gccacgttgt tcggtgccca aaatttttcc ctttccgcgg
      181 ccaccggcgt gtatctgcgc tttaacaaca gcaaaattat tttgcgtctg attctttatc
      241 tgccggtatg cctcttccac ttcatgcacg gcgctgcatg cataaccctc ctgaacgggc
      301 acattaaatt ttttcaataa ttcctttgcc tggtattcgt gaaggttcat aaagaatgtt
      361 tgcgcgaaga taagatttgc ccttcgctca aacagtccgc ggaaagatta atctgcctgt
      421 tctttccact tctgcaaatt ttcctgcagg atcctttttt gatcttcggt caaaacgctc
      481 atgatctttt cttttgtttc tttacgcgct gcacgaatcg cttcaggtgc gtcttcgcga
      541 ctgctgttct tcagatcctt cctttcatcg cggaattcat taaatattct catgacctga
      601 ttttcctggt ccggcgaaag gcgcagcatc ggttttgcag cttcaaacgc ttgtttaaaa
      661 cggccacctt tatgttcacc gccatcgttc tttttatcaa atagtcccat aactcgtttt
      721 taatttaaga attgtagata aacgcaaata ttatgctcgt ttattcatga ccacttgtct
      781 aaaatgaatg gagtgtattg ccttgccggg ctgttgtcgg gtctggttgc gatggaccgg
      841 agaaaactta ccacgatgct tatcagagat gtccctgctt atataaatcg aagagaacag
      901 cgacgaagtt gaatacaaaa tggaagatca caccatacca gatcgtaccg aagcgccgcc
      961 gcatggaacc gactaaaatt ccaaaaggca cgagccagaa caacgaaata aaattaagat
     1021 gcatgatcgc aaaagtgaat gctgtgacta tcacaaccag tcgctcatcg aggaaactgt
     1081 tcaggtaatt gtagatcacg ccgcgaaagg ccagctcttc gaagatcgcg ggattaatgg
     1141 caatcgagta taccattatg agtgcaggta tcgtgtaaac gctgtaacgt ccataatagc
     1201 ttgcgtcggt accaaagaat gagatattca attttgatac aatgatgttg acgataaacg
     1261 acataaaagc agccagcgta atgcaccccg ttaaccggac gacactgaaa tttcggaagc
     1321 gcagcaccgg tttaatttcg ccgaagttca tccaaacaaa gtacaacgtg acagaaccaa
     1381 gaagtatttc aacccaaaac aaccggtcat attcatcaaa ccaattggta aaatgaacca
     1441 cgaggcaaac gaacaggtat attataaaaa atttaaacgc tgactgaagc ttgctatgat
     1501 taaagaggct gatccgggtc gcgtcgtaac caagatattc cccgcagtgg tggcaaaagc
     1561 ggtgaaaacc tttcacttca ctatcgcagg cttcacaata atatctttcc gcaacgctca
     1621 taattttgtt tgaagttctt ctttgataag ggatacgcgg taggcgccct gtacgccttt
     1681 caacaccacg aacagcaatg cgaggcacaa catcataccg atcacgccgc tcagggtcgt
     1741 aaacgagtcg accaattttc caaaaatatt tatcgccgaa aaagtgatca ggatgatgaa
     1801 ggccgttagc atcgctgtaa aaggattgct gcggctccaa aaagcaagaa aataaaacaa
     1861 tgcggaaaga attaccgcca gtataaccat gaaatatttt tcgctgcttt ctgaaaagac
     1921 gaaaaatata ccaagcaaca ggaacgaagc cataatataa agaacaatgc gcgccacaag
     1981 cactgaagac tcggccttgt atagcaaatc ggtccggtgc tgcaaacgtt tatgataaat
     2041 atctacgagc aacttgttat gaaccgggta accgcaattg gtgcaaaaag aatagtctgt
     2101 tttgttcaca taattgcagt gcgcacacac gtcggcctgc ggcttcgcga gcacatctgg
     2161 cagtaaattg attttttgag cggagggaag tttcctaaaa tgcgacatac gcttctgcac
     2221 ttgaatcact ctgcaaattt tgttctattc tttaacgatc cggcggtcaa atatgttatg
     2281 ggaaagatac tgaattaggt cttaccttct atctttgcag ggaaattggg agacatgagg
     2341 aagcttgttg ttttgatcgc gtgtttattt tttttcacta aagggccgtc gttgtttggt
     2401 caatgttcaa tttgcacaaa gaccgcttct caattgggtg aaaaacctgg caaagggctc
     2461 aacgccggta tcatttattt aatgctgacc ccgtttgccg tcggcggcta catcgggtat
     2521 aggtggtgga agagggaaaa gcagctgatg aacgaagagt agatctgatt taggaaatag
     2581 gaattaggaa ttaggcagta gcatttagga tttaccgttt gtaattgatc aaccattcac
     2641 tattgacaat tcaccattga caatcggaat taggatttag gaattaggat ttaggatttt
     2701 cagatatact cttcgaaatt gatcaaccca ttcaccattc acaattcacc attcacaatt
     2761 cagaactgct caacaaacgc atacaagttg aagtctttcc cgtcaaacgc atcgcgtagc
     2821 tgctgactga gttgctgacg attaacattc ctcattcttt tctgttgaat taacacgtat
     2881 gccttgtctg ccagggcagc gatctttttt tcatttgatc gaagaccctg ctgatgcaaa
     2941 atgattttct cgagcaaatt atctatacct tttttttctg tagcaattgt ttgaatgacg
     3001 ggcgtttctt tttcatcgtg tccgtgcgca acggtttgca ttagattttt catgaactcc
     3061 gctgcgccag gccggtcagc tttgtttaca acgaaaatat ccgcgatctc gatcaatccc
     3121 gacttcattg cctggatctc atcgccagcc tcaggaacca acaccaaaac agttgtatca
     3181 gcgagcgctg ctatctctaa ttcgctttgc cccacgccga tcgtttcaat aacgattcga
     3241 tccaaaggtg cggctttcac cagctccgtt atttcaagaa tttttgggtg aagtccgccc
     3301 atactgccgc gcgcagagaa cgatcgtatg aaaactgcag gattgttgta ccatgattgc
     3361 atgcgtattc gatcgccaag caacgctcca tgatgaaaag gcgaagatgg atcaacgcat
     3421 aacacacaca ccgtttcatt gttctttacg aactcgccga tcaaggcgtc ggtaagcgtg
     3481 cttttgcccg cgcctggcgg accggttatg ccgatgatct tcttttctga atagggcaaa
     3541 ttctttaaaa gctcgccata tccgctgctt tcattttcga tcaaagaaat ggcccgtgcc
     3601 agcgctttca tatcaccttg ctggatttgc ttaatggtag gatgcaacat gcgaagtaaa
     3661 gtaataaatt ttttgcgttg acatgcccct tgtatcgctt agtagcgacg acgtgtgatt
     3721 gcggatcaat caaggtctat gaaagctgca caattctctt acaaaagact ttcatagatc
     3781 tcccaatgtt tttgggcagt aacgtcccag ttgaattgct cagaccattc gatgatcttg
     3841 gcggcacggt gatttacggc gtgatcatcc agggcgtgtt gcagttcatc actcatgtat
     3901 gatggctcaa aactgtctaa gtaatatgcg taattaccac cgacttcagg cagcgacgtg
     3961 gcctttgaca acaataccgg tttcccaaag tgcatagctt cgatcacagg caatccaaag
     4021 ccttcagcaa gggaaggaaa tgcaaacgcc acgcaatttt gcaggtacca gtatttttct
     4081 ccttctgaaa ttccgccggt gaacatcact ctttcatgta cgcctaatct ttttgcagtt
     4141 tcaacgattt tttgtctata ctgctcatta tgagttatgc cggctatcac caggcaatga
     4201 tcattcttca gcaacattcc gggcaacacg tgaaaatttt tcttctccgt aatggcaccg
     4261 atcgtaaaga tgaaaggagt ctgcgggatg actgccggag tagatgccgc tgaatcagtg
     4321 ttaatgttgc acccattgtg aatgatcttt attttcttat catccgcttc taaattcgcc
     4381 tgcagatcgg tttttacaaa cgcagaaatg gtgatgatca catcagcacg atcaaccttt
     4441 ttcttaagtg cgtcgaggaa ttttctttgt ttccggccag gcaacttctc atgcagaaaa
     4501 ttgaggtcgt gaacggtaaa cacgatctta gcttttgaac tggccgggaa ataattcgat
     4561 ccctggaatg tgcagtgcca cacgtcaaac tttcccgcga aagacatatg gtgtttatcc
     4621 aaagaatatt gaacgcgatt caagttattg gttggaaaca acgacttcgt ttcttttcga
     4681 aggtaaaaac caagacgtgc tttgtgcctg gcttgctgct gttgcaaagc gttggccagg
     4741 tgcaggcaat aatagtaaag cccggtattg ggatatcgca ttcgttctac atcaaccaaa
     4801 atctttttgt catcgtgcat gcatcagttt tgttcagcga tcatcgagta gcatccatta
     4861 tgaaatggcg ttgtctccgt cgtaaatcca tttgtggaaa gaaaagatgc gagatacttt
     4921 tcgtttcgtt tcgcatcatc caggggatgc acttcgatca gcattcgttt tatttttttc
     4981 aatgcgatcg catccgtgct gtataaaatt tcatactcgg cgccctcaca gtccagcttt
     5041 aataaattca cttcagctag cttgttgtca tcgatgatat tcctgagtgt gatcgcaggt
     5101 acatggaggc tcttcaggtt tctcgcatca aattcccggt agatcgaagc tattgaactt
     5161 tctgcgctct cctcttgtgt gaacaattct accgtttgag agcttccatc tgtgaccgct
     5221 tttgcgtcga tgatgatctt attttccgcg aaaggattta tttctttgag cctttcgatc
     5281 ttccgcacat ttgatggcaa cggttcaaac gcataaacaa cggcgtcctt caccttgctg
     5341 agcacgagcg ctgcgaaaaa accttcgttg gcgccgatat ctatcacggt tattttcgcc
     5401 ggcaggttgc tgaataattt agttgtctta taaaaatcct ctataaaaat ttctttgaat
     5461 acagggtaat tctcagcatt cacttccaat tttaccggga ccggctttgt aacaaaatgc
     5521 aacagccttt gttgtacttc gcgcttatga aacacatatt ccggccagtt gcgcaggttg
     5581 gacactgcat taagaaactt tgaaacgtta attcgcatgt ataaactccg ttttatgcag
     5641 cgcgtcggct ttagagtcaa ggctagcctt tacccatgcc gggtgaactt ctgcaataca
     5701 atggcatgga gcgcggtttt ttgcacagtc atggcattct ttatccagta caaaaacttc
     5761 ggcgcatttg ccgattgggc cccaccgtcc tggatgcagc ggtcggattg gcgcataaat
     5821 accgaaagcg tctttgccca ttgcagcggc aagatgcagc ggccccgtac tcgcggcgat
     5881 caaaccatta catgctgaaa tgaaactgat aaattgcccc agttccatgg cacctgtaat
     5941 gtctgtaacc ttgtgcgata tttcattgat taatggctgc aagatctgac gttcagccgt
     6001 tgtgcctgtt acaaatatct tataccgcgc gggatcgagt tcctttacca gcctgataaa
     6061 attttgcagt ccccattctc tcgcactgcc ccgcgatttc ggatgtaaaa taagattgta
     6121 tttagtccta tcgatcaacg aagcgaattc ttttcgcaaa gggtcaaggt tggtgaggcc
     6181 ataagagtcg ctgatgtcct gcagagaaaa ttctttgtca atgccaaaag gctccagcaa
     6241 tttcaagttc aattgagctt cgtgcaaatc tgattttttg cgactcagat tgatcagctt
     6301 gttgcaggta ttccagtgat agacgcggtg attcgtacca actctccatt caatgcccaa
     6361 tttctttgca cgcttcgcaa ccggtgcaaa cggttttaca tgaacgatcg cgctgaccgg
     6421 ttcgccgttt atgagcgttt gagtttgtaa aaaatcttcc agtttaatga atccgtcggt
     6481 ataagaacaa gcttcgacta ctggttgtgt ataatccctt ccgagaaaat acactttcat
     6541 gtcgggaaac tgatctttta acgctttggc catcgggaga gcgagcacca tgtctccaat
     6601 gctgtctgtc ctgctgagaa gaatatttga gaaggtgtgc ttcaacgcca caatttacac
     6661 gagcaaaaat aaagcggaat gattatggaa gtacataata cgggcatctt tacttttgct
     6721 cgcattatga caaactttat tcccatattt cctcttgagc ttgtggtgta cccgggggaa
     6781 aaagtgaatc ttcacatttt tgaagaacgt tacaaacaac tgatcgcgga atgcaacaaa
     6841 gacaaaaaat tgtttggaat tcccgcggtg ataaaaaaca aaatatctga aaccggcacc
     6901 cttgtagcaa ttgaagacat tgtgaagcaa tatgacgatg ggcgcctcga tatcactact
     6961 aagggcgtga gcgtttttcg cattctcgaa gttattgatt cgatccctgc gaaactgtac
     7021 agtggcgcaa ttgttaaaca tctctctgct gatgagaatg gcaccagcaa gcacgtgcaa
     7081 aaggtgatcg atgcgatacg cgagcttcat gttttgctgc acgtaaagaa agactttaat
     7141 aaacctgacg ccgaactgaa aagttttgac atagcgcatc acgccggcct ctcacttgaa
     7201 gaagaatatg agctgcttaa tttattgcgc gaagatcagc gcgtggaata tttacgccgt
     7261 cacctgaaaa aaataattcc gctcgtagcc ggtgttgaga atttaaaaaa gagaatacaa
     7321 ctcaacgggc atttcaggga gctaaaagga tttgaccccg gcattggaaa aaaataagct
     7381 gcatgcaaac cacactctgc ctggattttg gcaatacccg tttaaaatat gctgtattta
     7441 atgatgatga attgaaagag gtactcgtgc ttgaaaatga tgatccgtca agtattgaaa
     7501 aagttttaca acaatatcag ccatctaaat cgatcctttc atcggtgatc gaccataacc
     7561 cggagatcga aaatattctt gcggtaaaga caagatttca caaactttcc taccagtcta
     7621 aattgccatt cagaacacca gttggcaaac cggaaacgat cggcgccgac aggcttgcgc
     7681 tcgtggccgg cgcggtgcat ttctatccca atcagcacaa cctggttatc gggcttggtt
     7741 cgtgcatcac atacaatttt gtaaataagt ttcatgaatt tttgggagga agcatttcac
     7801 cgggccttga aatgcgtttt aaagcgatgc atacttttac cgccaaactt ccgcttgcaa
     7861 aacccaacgc aaattttccg ttgatcggat atgacaccaa cacgaattta ctaagcggtg
     7921 ttatacttgg aattactcac gagatcgagg gcatcattga tgaatacggc ttgagataca
     7981 gcaactttaa cgtccattta accgggggag atatgggctt ttttgtgcct catctcaaaa
     8041 agaagatatt tgcaagccct tatttaatct ttaaaggtct ctatgcaatt agtgaaacca
     8101 acggctaatt atattttttt ctttcttctc ttattttttt cacacgttgc tttcggccag
     8161 gaaaattctc cgttctcgcg ctatggttta ggcgatttgt acccgcaaca acatattacg
     8221 tcgcgcggaa tgggaggggt ttcggcagca tatacgaatt accaggcgct caatacgctg
     8281 aacccggcca gttatggatc attgagttgg gtcacttacg atttcagcct gagcattgac
     8341 gaccgaactt tgcgaagtgc ggatccggtt gcaaagtata attccacgaa ctttctgccc
     8401 tcgtatcttc agttaggaat tccgttaaac cgaaaaagga ccgcgttggt atttggcctc
     8461 aggccgtaca cgcgtgttaa ctacagcgtg gagcaaagca aaaccttgtt ttatgacagt
     8521 cttggcgtaa cagacagcgt gcacaatttg tatgaaggag acggtggaat gaaccaggta
     8581 tttgccggga tcggaaaaac atgggcggga aaaaatctta gcatgagtct tggtttaaat
     8641 gcaggctacg aatgggggag caaaaacatc agcactaaaa tcaattttcc ggccgacagc
     8701 cttcgttact atatgtccaa ttcaacggac acaagccatt tttggggagt cttttttaat
     8761 cctggtgttc agttcaatct gaagttgaag caaggcatca atgcatacac caaaaaccgg
     8821 gagagttacc atttgaccat cgggggttcc ggaacttttg aacaggagtt aaatgtatcg
     8881 aagatcatta ccagggaaac attctactat acagacggag gagcaatgag gcaatatgac
     8941 agcatactaa aaattgctga caccgccgga aaaataaatg tgccacttac ttacaccgca
     9001 ggcttcatgc tcacaaaaac tatcggcaat acggcattcg aactcaacaa gtggtcaatc
     9061 ggcgcagatt atacatctac aaaatggacg aagtaccgct attacggcct gccggatcaa
     9121 ttgtccgata gttggttcct gcgtgctggt atagaatttt ctccatctcc gctaaccaac
     9181 ggaagtgtat taagccgcgg tacatatcga gtaggctatt atacgggcca ggactatatc
     9241 aatgccgatg gaaacggata caaagtacat gcatacacag tcggattttc atttaatcta
     9301 cgaagattca gatcgtacga caggcagttt acgactataa acactgccgt cgaagtcggt
     9361 aaacgtggca gcaccgtaaa taacatcaca gaaaacttct tcaaattttc gctcggctta
     9421 tctttaagtg atgtttggtt tatcaagaga aaatatgatt agctcgcccc aacgcatttt
     9481 tccaaaaaat gtaatggctt ttttagggtg ctgctttatt ctcagttgcg caaacaacta
     9541 ccaggaagta caaaatcttg caaaaaaacc ggtaccggtc gataaggcaa ccaacgtaga
     9601 cagctactta agccaggatg gaattgtaaa agcaagactc actgcgcctc tgatgacgag
     9661 gaccgtttta gccgacacac caaaaaccga gtttcccaat tcactccatg tagattttta
     9721 tgatactaca aagatccaga gcaggctctt tgcaaagtat ggattgtact atacgaataa
     9781 acgcctggtt tatctgcgcg acagtgtgat cgtttttaat atgcaaggtg acactttacg
     9841 ctgcgaagaa ctttggtggg accaaaacag ggagcagatc tatacgaatg ttccggtgca
     9901 tatccgcaaa cccgatgaaa aaattgatgg aaccggcctt gttgcggatc aaaatttcag
     9961 aacgtggacc atcacgaatg caaagggtcc aatcaatgtg cctgacagta cgttgccggc
    10021 aaattgagtt tgaggtttca cgtttgaagt ttgaggtttt tatcagcgtt caaccaattg
    10081 ttcttttaaa aatttcctcc agtcttcgag gatctttcct ttcagcacgc gcggaaattt
    10141 atgctggccg ccgaccttcc ccatcttccg catgaactga atgaacgttt tttcgctaag
    10201 cacatcgagt ctcacttccc gcaatgcatg tttgcgctcc gttgcatagt cgtcgttgag
    10261 ctgtttaaga ttgtcatcga ttttatgccg caaagtttcg gcatttaccg ggtcatcgca
    10321 ggccacatac caatggtggg caaacaagtt gccatatgga acgccggcaa ctgtaaattc
    10381 aggaatggaa atgttcattt cagcgcttgc catttcaatg gcgcggttca tgttttctac
    10441 actcaggtgc tcacctacaa gacttaaata atgtttcgtg cggccggtga ttacaagctc
    10501 acatcgtttt ttgtcagtga atcgaatcgt atcgcccatg agataccgcc atgcacctgc
    10561 gctggtactt acaaggatcg cgtaatcttt tccttcttcc acttcgccga tggtaagcac
    10621 ttgcggatgc ccagcaggat caccgttcgc atcaaagttt ttgtcgtcaa acgggatgaa
    10681 ttcatggaag atgtgttcat tcgttatgag gcgcattccg cttgcatgcg gtcggtcctg
    10741 gtatgcgaga aaaccttcac ttgcgaggta ggtctctaca taaataagtg gtttgtcaac
    10801 cagtttctca aaacccttct tatatggttg aaagctcaca ccaccgtgca caaaaattgc
    10861 gaggtttggc catatgtcgt gaatggtgtt gagcttgtaa cgttcaatga tcatctccat
    10921 acacatctgt atccatgccg gcacgccaac aacgaaaccg atgtcccact cgggagcttt
    10981 tttcactatc tcattgagct tgcgtgtcca gtttctttgc cgcgctatct ttcttcccgg
    11041 tttgtaaaaa ggctgaaacc agaaaggaac tcttttggcg gtgatgccgc tgaggtcacc
    11101 ggcatagtaa ccagcgccct tttgtaatgc agtactgccg cccagcataa gccacccttt
    11161 tccaattgaa cgcattggca ggtcttcgta attgcgaagc gtaaggatct gcctgatcat
    11221 cgcgacccgg ttgcctttaa gcagatcgtt ggtgatcggg atatatttac ttgcagcttc
    11281 actcgtgccg ctgctaagag cgtaatattt tattttaccg ggccagcaca catcgggcat
    11341 tccttcgagc gtgcgatgcc accactcttt atagatcttg ctgtaattgt ataacggaac
    11401 gttctgctgg aacttcttga taggatcctg ctgaagtaag atctcatcaa aacggtactg
    11461 ttgtccaaac tctgtaaaac gcgctttatg cagcaatttt ttcagcaccc gcaactgctg
    11521 tcgttgtggg tcattctgcg gcaagcgcaa agtttttaga atcgtttggg ggagattgat
    11581 gtcaaatatc gccatcagtg atatcaatct tttgatttag ctacgaagct aatgaataaa
    11641 gcgttcaaag atgatatatt ttacccatcg tattactgct actgctgccc gtaatacttt
    11701 tcgaacctcc tttgtgccag taatatgaaa accggttatt atttcgcgtc acgaagtcga
    11761 tggtctcgcc ataagatagt ttgcctgtac agaagaccag gtttgaagtt tgatgtttga
    11821 actttgatgt ttgatgcagt tgtgaaagag aatgaatttt ttcgaacgaa tagtgtagag
    11881 gcaacaatat tttctccgct gattgaatat cgtcgtcagc accgactaac aaaaaatgtg
    11941 cactaccgag atcgttattt ttttgtatag ttcttttgaa cgatgagaaa aatgttgtag
    12001 ctgagatcgc cgtttttaga aacgtagccg atgccttcga atagtgttta tccacaaaaa
    12061 ttttcatcgc atggtagaaa ttttttcgat aggccggacg atctttttgt gtgctctcac
    12121 ccttgaaatg gatggcgaca gttgtgccaa ggtaatagtt tttgcagccc gagtttttta
    12181 tgcgatagct cagatcaatg tcttccccat acatgaaaaa gttttcatcg aaaccgttaa
    12241 gttcggtcaa catttgcctg cgtgccataa agaatgcacc ggggagaaca tcgacttcag
    12301 caatttcgtc ttcatgcaaa ttgcccagcg cataccggtt aaagaccggt gatcgtggaa
    12361 acagcaacga tatcccggtt aacttataaa acgatgccat cggcgacgga aaggagcgct
    12421 tgctttccgg taagaaattt ccgctgccgt cgaccagccg cacgcccact gcacctgcat
    12481 cctgctgcgc tgaaagaaaa tccaaacaag cggttatact gttttcagat atgatcgtat
    12541 caggattcaa aaacaaaata caatctccgg acgccaggga caagccttta ttgttagccc
    12601 tcgaaaaacc gtggttgatt tcattcttaa cgaaagtcac ctgtggaaaa ttcgagctta
    12661 gataatctgc acttccatct gaagacgcgt tatcaacaac tattatttct gcattaaggt
    12721 ttttgcaggc agcttcaacc gaataaatac attgttctaa aaaatatttt acgttgtagc
    12781 taactatgat tatcgaaacc tgcatcgctt ttgcgaatta cgatgaattt tttcgaaacc
    12841 gtaaccggtc actttagcag caatcacaaa agcgaacgag aattctatat ttgcgcatgc
    12901 ttaaacaggt actattacag gcaacggaag ccgcggcagc cgttataaaa gattactcaa
    12961 cccgcagttt ttctatcagc agcaaagaag ggatcaacaa tcttgttacc gaagtggatc
    13021 ataagagtga agaggtgatt tttgcgatca tcaaacaaaa ctttcctggc caccaaatac
    13081 tgagtgaaga atcaggcgag ctcgtacaag actccaccta taaatggatc attgatccga
    13141 tagacggaac ggtaaattac gccaatcata ttccattatg ttgtgtaagc atcggcgttg
    13201 aaatagaagg taaaattgaa ttgggtgctg tgtacaaccc gttcatcaat gaattctttt
    13261 ttgcgcagcg aggtttcggt tcaacgctga atgatgcacg cattcatgtg agcacgaccg
    13321 agcatgtgct caacagttgc cttgtaacag gatttcctta tacctacctc gacatgccga
    13381 acgggccact cgaagtgttc agcaagttta ttcgcaaggg tgtgccggtg cgcaggttag
    13441 gcagcgccgc aatggacctt tgctgggtcg cggcaggccg cttcgatggt ttttacgagc
    13501 acaagttgaa tgcatgggat agtgcagccg gattcctgat agtagaagaa gctggcggaa
    13561 aagtaacaga catgacggg
//
LOCUS       DASQJI010000064         6636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2615261,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000064 DASQJI010000000
VERSION     DASQJI010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6636
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2615261"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..2053)
                     /locus_tag="VEV83_02185"
     CDS             complement(74..2053)
                     /locus_tag="VEV83_02185"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK43948.1"
                     /translation="MRKLFIVACLVSCIKIAAQSSSSDSGTFLIHKFEQHIGREKYTV
                     TKNANTLKYNIDFAYTDRGSPVTLKAMLQLNPNLQPLAFTIKGGTSRFSSVNDSVVIN
                     NKTVEMRIDDSSFNEPLQQNSFTIAGYSPATAQMLLIQYWKKHDKPANIHTIPFGSVQ
                     VRIDGLDTFSFNHNSLILERYVITGLIWGNELLWADKNGQLYCLITNDAEGDKQEMML
                     DAYESLLPTFIDKAAIDGMRLFINTAKPSSQKHDVIAIKGGTIIDVVNKTSIPGGVVV
                     IENGMIKSVGTANTVNIPSDAFVIDAAGKAILPGLWDMHSHFEQAEWGPAYLAAGVTT
                     VRDCGNEFGYINSIQKAIDDGHGIGPHILKAGIIDGKGPYALGIIQADTKQQAVEAVQ
                     RYNENGFVQIKIYSSMKPEIVKAVCDEAHRLGLTVTGHIPGGMTLQQGVDSGMDMVNH
                     VQYVGSVMKPNKADSLISVDDSTNKGVLEFIKTHHVVIDPTLGVYELVFRPLKNSITS
                     IEPAFSTLPAPLQKIFVNTGMEDERYLRYGSILMKNYKAIVKAMYDDGVPIVAGTDMD
                     FPGYSVDRELELYVESGLTPMQAIETATIIPATVMKQANITGSIETAKRADILIIDGD
                     PLQDIRNLRKVVTIIKDGNIYDPLQLHKIAGFNVK"
     gene            complement(2088..2234)
                     /locus_tag="VEV83_02190"
     CDS             complement(2088..2234)
                     /locus_tag="VEV83_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43949.1"
                     /translation="MKLVIESFMPNNGVIFSDGIENDFIRFNSGAIVTIGIAGEKANL
                     VLRT"
     gene            2598..3857
                     /locus_tag="VEV83_02195"
     CDS             2598..3857
                     /locus_tag="VEV83_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK43950.1"
                     /translation="MADIFERLIKHYGPIGEHRDKAHGYYTFPKLEGEIGNRMKFRGK
                     EVIVWSLNNYLGLANHPEVRKADAEASAEFGLAYPMGARMMSGNSNHHEQLERELAEF
                     ESKEDAILLNYGYQGIMSAIDTLCGRHDVVVYDAESHACIIDGLRLHPGHRYVFRHND
                     LEDCEKQLQRATSMIEKQGQGGILVITEGVFGMAGDQGRLKEICDLKKKYNFRLLVDD
                     AHGFGTLGNTGAGAGEEQGCQDDIDLYFSTFAKSMASIGAFIAGPRTIIDFIRYNIRS
                     QIFAKSLPMPYVIGNLKRLHMLRSMPELKERLWKNALQLQSGLKEYGFDIGKTNSVVT
                     PVYMKGGAPEATAMVTDLRENYGIFCSIVVYPVIPKGHIIYRLIPTAVHTEEDIETTL
                     TAFSETKDKLDAGVYNVEDILPMAEAR"
     gene            4116..4637
                     /locus_tag="VEV83_02200"
     CDS             4116..4637
                     /locus_tag="VEV83_02200"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK43951.1"
                     /translation="MQRTKWTDRKFTFNIPPGWMQNIFERLRGTELRLRALVDGLPDD
                     KISFKPGGKWSIKEHIGHLSDLEELHEGRIDDFIAGKQTLRAADMSNTKTNNAQHNDM
                     PIHELLDEFAFKRIIFISRLETLDDETQEFQSMHPRLQVHMKPVDMAFFTAEHDDHHL
                     ASIREIIDNDEIA"
     gene            4661..5104
                     /locus_tag="VEV83_02205"
     CDS             4661..5104
                     /locus_tag="VEV83_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HYK43952.1"
                     /translation="MKKIVIAFSLLAACVEKQADLSKQSAEEIIQTDRAMSDEAAKNG
                     FFKTLLSYADDSVVKPQEGMAPVIGKTALQKFWSSRTDFKELTWEPFKAEASKSGDIG
                     YTLGNWKLVTKDTTMYGNYYTIWKKQPGGKWKFLVDGGNNTPAPK"
     gene            complement(5155..>6636)
                     /locus_tag="VEV83_02210"
     CDS             complement(5155..>6636)
                     /locus_tag="VEV83_02210"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HYK43953.1"
                     /translation="NALTEPLKQNPHIFVSLTGPSESDYKLPDNATLLQNTYAAQKTA
                     VAPYTEKAIASELLKKKPAAGTITNETKNKTLGITELTFSNGARVVLKPTDFKNDEII
                     LTSFHKGGTSRYNAADKYNANYASTVVQQMGIGDFSPTDLSKFLSGKNVTVSPRIGGL
                     TAGVNGSSSVKDFETMLQLIYLYLTSPRKDEALFNGWKDKQKSAVQFSLQDPQTAFVD
                     TFYQTLYQKNPLTPVIVPRPAYFDSIDLNRAMQIYHDQLSDANEFTFIFTGSLNVDSV
                     KPLLATYIGGLPHTNNQSLFADNGVRPIKGDINMNVYKGSEDKSLIIKFYSGEVPYSA
                     DLALRAQALTEILNIKIIDDLREKLGAIYGGGIFGGLNKLPYNNYSFVLQLPCGPSNV
                     DTLLKAANDEIERIKKNGPDQSDLDKVKKTWIEQYKVQIKENGFWSGKLQGIYFQGDD
                     PQRIFEYEANVNALTTDDIKRTANQLLNGDNVITAILYPEKKL"
BASE COUNT         1828 a         1424 c         1479 g         1905 t
ORIGIN      
        1 aaaaaccgtt tgtttaaaaa gcaatcatct tagcgatttt caaaacggag ctataaatag
       61 cctgtattaa atgttatttt acattaaaac cagcaatctt atgcagttgc agaggatcat
      121 aaatatttcc atcttttatt attgtgacca ccttgcgcag gtttcggata tcctgcagag
      181 gatcaccatc aatgataaga atgtctgccc gcttcgcagt ttcaattgac cctgtaatat
      241 ttgcttgttt cattacggtt gcaggaatta ttgtcgctgt ttcaattgcc tgcataggtg
      301 tgagccctga ttcaacatat aactcgagct ccctgtcgac gctgtacccg gggaaatcca
      361 tatcggttcc agcgacgatc ggaacaccgt catcgtacat agcttttaca attgctttat
      421 aattcttcat taaaatactt ccatatctta gatatctttc atcctccatc ccggtgttaa
      481 cgaaaatctt ttgcaaaggc gcgggtaatg tggagaaagc aggctcgatg ctcgtaatgc
      541 tgtttttaag gggacgaaat acaagctcgt acacgccgag ggtagggtcg atcaccacgt
      601 ggtgtgtttt tatgaattcg agtacgcctt tatttgttga atcatcaacg gaaataaggc
      661 tgtcggcttt atttggtttc atcacagaac cgacatactg aacatgattt accatatcca
      721 tgcccgaatc aacgccttgt tgcagcgtca tgccacccgg tatatgtccg gtcaccgtca
      781 ggccgagccg atgcgcttcg tcgcagacag ccttcacgat ttcgggcttc atggagctgt
      841 aaatttttat ctgcacaaag ccgttctcgt tataccgttg aactgcctca accgcctgct
      901 gtttcgtatc tgcctggata atacctaatg catatggccc tttaccatca ataatacctg
      961 cttttaaaat atgcggaccg attccatggc cgtcgtcaat tgctttttga atggagttga
     1021 tataaccgaa ttcatttccg caatccctga cggttgtgac cccagcggcg aggtaagccg
     1081 gtccccattc ggcctgctca aaatgcgagt gcatatccca taaaccgggg agtattgctt
     1141 taccggctgc atcaattaca aaagcatcgg acggaatgtt tacggtattt gcagtgccaa
     1201 cacttttgat catgccattt tcaattacga caacaccacc cggtattgaa gttttgttta
     1261 caacatcgat gatagtgcca ccttttatag ctataacatc atgtttttga gaagatggct
     1321 ttgcagtatt tataaacaaa cgcatgccat ctatggcagc tttgtcgata aacgtcggta
     1381 acaaagattc atatgcgtcg agcatcattt cctgcttatc tccttcggca tcgttggtga
     1441 taagacaata aagttgcccg ttcttatcag cccacaataa ttcattgccc cagatcaaac
     1501 cggttattac atacctttca agtataagag aattgtggtt gaatgaaaaa gtatcgagac
     1561 catcaattct tacctgtaca cttccgaacg ggatcgtgtg aatgtttgca ggtttatcgt
     1621 gttttttcca gtattgaatc aacaacattt gcgcagtcgc cggcgaataa cccgcgatcg
     1681 tgaaactgtt ttgttgaagt ggctcgttga atgacgaatc gtcgatcctc atttctacgg
     1741 ttttgttatt aatgacgacg gaatcgttca cggatgaaaa cctcgaagtc cctcctttta
     1801 ttgtaaacgc aagcggctgc aggtttggat tgagttgcag catcgctttt agcgtaaccg
     1861 gcgaaccccg gtcagtgtat gcaaaatcaa tattgtattt aagagtgttt gcatttttgg
     1921 ttactgtgta tttttcgcgt cctatgtgtt gttcaaattt gtgaataagg aaagttccgc
     1981 tgtcagaaga tgatgattgg gcagcgattt taatgcagct gaccaggcag gcaacgataa
     2041 aaagttttct catatgtttt aaataaagaa ggaaggtaaa gctaccttca agttcttaga
     2101 acgaggttcg ccttttcacc ggcaatgcca atggtaacga ttgcgcccga attgaatctt
     2161 atgaaatcgt tttcaattcc atcggaaaag atgactccgt tattcggcat gaaagattca
     2221 ataacaagtt tcacatcccc cattaaaata cctgcgggta tgtctgttcg cgtcttcttg
     2281 ctcgcaaatg gtttttactc ctaggttctt actgttgtct tgataacttt tattccgaac
     2341 atgcagtctt gatttagtta gtcaaatata aagtgcaggc atcgattaac tcagaataag
     2401 taagcttgtt caatttattt ggtcttcttt tccacaacgc agcaggattg tggaaaaccg
     2461 atgcacaatc ccaattcttt aacgctttgc ttaagcttac actttggtcg tacgcgtcat
     2521 ttttctattt ttgcgcgatc tatccaggtt accaggttgc ttagcagcat ttcctcattc
     2581 tgaaaacttt tttacacatg gcagatatct ttgaaaggct cataaaacat tacgggccta
     2641 tcggtgaaca tcgtgataaa gcacacgggt attacacctt tcctaaattg gaaggtgaga
     2701 ttggcaaccg tatgaaattc agaggaaagg aggttattgt ttggagcctc aataactatt
     2761 tgggcctggc aaatcatccc gaggtgcgga aagcagatgc agaggcaagc gccgaattcg
     2821 gattagcata tccgatgggc gcgcgcatga tgagtggcaa cagcaatcac catgagcaac
     2881 tcgaaagaga actggccgaa tttgaaagca aggaagacgc gatccttttg aactacggct
     2941 accagggtat tatgagcgcc atcgacacgc tctgcggccg gcatgatgtt gtggtttatg
     3001 atgccgagtc gcacgcgtgc atcatcgatg gattgcgttt gcacccgggc caccgctatg
     3061 tcttcaggca taatgatctt gaggattgtg aaaaacaatt acagcgcgca acgtcgatga
     3121 tcgagaagca gggacaaggt ggaatattag tgatcactga gggtgtgttt ggaatggcag
     3181 gcgaccaggg ccggctgaaa gaaatatgcg acctcaaaaa gaaatataat ttcaggctgc
     3241 tggttgatga cgcgcatgga tttggaacac tgggcaacac tggtgctggc gcgggtgaag
     3301 aacaaggctg ccaggacgat attgatcttt atttctcaac ctttgcgaaa tcgatggcat
     3361 ctatcggcgc attcatcgcg gggccaagaa ctattatcga ttttattcgc tacaatatcc
     3421 gctcgcagat cttcgcaaag agccttccaa tgccgtatgt gatcggcaac ttgaaaaggc
     3481 tgcacatgct gcgttcaatg cccgaattaa aagagcgtct ttggaaaaat gcgttgcaac
     3541 ttcaaagcgg tttaaaggaa tacggttttg atattggaaa aacaaattca gtcgttacac
     3601 ctgtgtacat gaaaggcggt gcaccggaag caaccgcaat ggttacagat ctgcgcgaga
     3661 actatggtat attctgttcg atcgtagtgt accccgtgat tcctaaagga cacataattt
     3721 accggttgat ccccactgct gttcatacag aggaagatat cgaaaccaca ttaacggcat
     3781 tcagcgaaac aaaggataaa ctggatgcag gtgtatacaa tgtggaggat attctcccga
     3841 tggcagaagc taggtgagat gaaggcaaaa tccaaatctc acatatcaag atccaaacaa
     3901 ataaaaaaga aaaatttcaa atctcaatcg tgtcgccggt catggaaggc tatttggtgt
     3961 agcatttgat atttcttgtt tcttgtttct tgttatttgg ttcttggttc ttaagatgaa
     4021 acttcatata tcccctctca aattgagagg gttttttatt tattaaaacc gttttcgttg
     4081 gatggcttcc gccgtacatt tggaaaacat cgctcatgca acgaacaaaa tggaccgacc
     4141 gaaagtttac tttcaatatc ccgccggggt ggatgcagaa tattttcgaa aggctccggg
     4201 gcacagaact tcgattacgg gcactggttg atggattacc ggatgataag atttctttca
     4261 aaccaggtgg caaatggagc attaaagagc atatcggtca tttaagcgac ctcgaagaat
     4321 tgcatgaagg acgcatcgat gatttcattg cagggaaaca aactttgcgc gctgcggata
     4381 tgagtaatac caaaacaaac aatgcacaac ataacgacat gccgatacat gagctgctgg
     4441 atgagttcgc gttcaaacga attattttta tttcaaggct tgaaacactt gacgacgaaa
     4501 cgcaggagtt tcaatcgatg catccaagat tgcaggtaca catgaagccg gtcgatatgg
     4561 ctttctttac ggctgaacat gacgaccacc acctggcgtc gataagagaa attatcgaca
     4621 acgatgaaat cgcctgatca catgaacaaa aaatttctgc atgaaaaaaa ttgtaattgc
     4681 gttctccttg ctggcagcgt gcgtcgaaaa gcaagctgat ctcagcaaac agtctgctga
     4741 agagatcatc caaacagaca gagctatgag cgatgaagcc gcgaaaaacg gtttctttaa
     4801 aacgcttctc tcctacgccg atgatagcgt tgtgaaaccg caggaaggca tggcgcccgt
     4861 gatcggtaaa actgctttac aaaaattctg gagcagcaga acagatttta aagaactcac
     4921 gtgggaacct ttcaaagctg aagcatcgaa aagcggcgac attggttata cgttagggaa
     4981 ctggaaactg gttactaaag acaccaccat gtatggcaac tactatacga tctggaaaaa
     5041 acaacccggc ggtaagtgga agtttctagt ggatggaggt aataatacgc ccgcaccaaa
     5101 ataaaaagac gtgccggttt ttgaaaaccc gacaggcctt ttgacacata cgtcttacaa
     5161 ttttttctcc ggatacagga tcgctgtgat cacattatcg ccgttcagca attgattcgc
     5221 ggttcttttt atatcgtcgg tcgtgagcgc attcacgttt gcctcgtatt caaatattcg
     5281 ctgcggatca tcgccctgga aataaattcc ctgtagtttg ccgctccaaa aaccgttttc
     5341 ctttatttga actttgtatt gctcgatcca tgttttcttc actttgtcca aatcgctttg
     5401 atcaggccca ttctttttta tcctttcgat ctcgtcgttt gctgccttaa gcaaggtgtc
     5461 aacgttcgaa gggccgcagg gtaactgcag tacgaacgag taattattgt aaggtagttt
     5521 gttcaatccg ccaaaaattc caccgccgta gatcgcacca agcttttcac gcaggtcatc
     5581 aattattttg atgttcagga tctcagtgag agcctgtgcc cgcaacgcga ggtcagccga
     5641 gtaaggaact tcaccggaat aaaattttat gatcaggctt ttatcctccg agcctttgta
     5701 aacgttcatg ttgatgtcgc cctttattgg acgcacaccg ttgtcagcaa aaagagattg
     5761 attatttgta tgcgggagtc caccaatata agttgcaagc aacggtttca ccgaatcgac
     5821 atttaagctt ccggtgaaaa tgaaagtgaa ctcatttgca tcgcttaact gatcgtggta
     5881 tatctgcatg gcgcgattca aatcgatact gtcaaaatat gccggccttg gaacgatcac
     5941 gggtgtcagt ggattttttt gatacaacgt ttgatagaag gtatcaacaa aagccgtttg
     6001 tgggtcctgc aaagaaaact ggacggcaga cttttgtttg tccttccagc cattaaacaa
     6061 agcttcgtct tttcttggag aggttaaata caaatagatc agttgaagca tcgtctcgaa
     6121 gtcttttaca ctgctgcttc cattcacacc agcggtcaag ccaccaatgc gtggcgacac
     6181 cgtgacgttt tttcctgaaa gaaatttaga aagatcagtg ggtgaaaaat caccaatgcc
     6241 catttgctgc actaccgttg aagcgtaatt cgcgttgtat ttgtctgcgg cattataacg
     6301 cgaggtgcct cctttatgaa acgatgtgag aatgatctcg tcgttcttaa aatctgtcgg
     6361 cttcaaaacc accctggcac cattagaaaa agtaagttcg gttatgccaa gcgttttgtt
     6421 ttttgtttca ttggtaatcg tacctgcggc tggtttcttt ttcaaaagtt cagaggcgat
     6481 cgctttttca gtgtagggag caacagccgt tttttgcgca gcatacgtgt tctgcaaaag
     6541 cgttgcgtta tccggcagct tgtaatcgct ttcagacggg cctgtaaggc ttacaaaaat
     6601 gtgtggattt tgtttcaggg gttcggttaa tgcgtt
//
LOCUS       DASQJI010000065         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1540187,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000065 DASQJI010000000
VERSION     DASQJI010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540187"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1172)
                     /locus_tag="VEV83_02215"
     CDS             complement(<1..1172)
                     /locus_tag="VEV83_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK43954.1"
                     /translation="MHKKSPAYPCTYARNKHLASDPFTIYNSQFATVFLQLNFFKLEE
                     AAVQSVQPKTIFSVLFAISFSHLLNDTIQSLIPSIYPIVKNSFHLSFAQVGFITLTFQ
                     LCASLLQPVVGNYTDRKPKPFSLATGMSFSLAGLVLLSQSSSYTMLLVSVGLIGIGSS
                     VFHPEASKLAYMAAGNRRGLAQSIFQVGGNTGSSLGPLLAALIIVPYGQSNILWFSLL
                     AFLGILVLSRLGFWYRAHLLSIKKKPRPKHFHNLHLSKRRVTISVIILLTLIFSKYFY
                     LASMTSYYTFYLIHKFHVSIQTSQLYLFAFLAAVAVGTILGGPLGDRFGRKYVIWFSI
                     LGAAPFTLLLPHVSLFVTCVLSIFIGLIIASAFSAILVYAQELLPGKVGMVSGLFFG"
BASE COUNT          526 a          323 c          328 g          387 t
ORIGIN      
        1 ccaaaaaata atcccgaaac cattcccact ttgccgggta ataattcctg ggcataaaca
       61 agtatggcag aaaaagcaga agcgattatc aatccaatga atatgctaag cacgcacgta
      121 acgaatagtg aaacgtgcgg aagcaataac gtaaacggag cggcgcctaa tatggaaaac
      181 cagatcacat attttctgcc aaacctgtcg cccaacggac cgccgagtat ggtgccaact
      241 gcgactgccg ctaaaaaagc aaacaggtac agttgagacg tttgaatcga aacatgaaat
      301 ttatggatga ggtaaaaagt ataataactc gtcatcgacg ccaggtagaa gtatttcgaa
      361 aagatcagcg tcagtaaaat gataacgctg atcgtgaccc tgcgttttga taaatgcagg
      421 ttatgaaaat gttttggtcg cggtttcttt tttatcgaaa gtaaatgtgc tcgataccaa
      481 aaccccaacc tgcttagcac aaggatgccg agaaaagcaa gcaatgaaaa ccataaaata
      541 tttgactgtc cataaggcac gatgatcaat gcagcgagca atggcccgag cgaactgcct
      601 gtattgccgc ctacctggaa gatagattgg gccaatccgc gacggttacc ggcggccatg
      661 tacgcaagtt ttgatgcttc cggatgaaac accgatgagc caataccgat caatccaacg
      721 gataccagca acatcgtata cgacgatgat tgcgataaca aaaccaagcc agctaaacta
      781 aaactcatac cggtcgccaa tgagaacggc tttggttttc tgtctgtata attgcctacc
      841 accggctgca ataaagatgc gcatagttga aaagtgagcg taataaatcc aacctgcgca
      901 aagcttaaat gaaaagaatt ctttacaatg ggataaatag aaggtatcag cgattggata
      961 gtatcattta ataagtgaga aaaacttata gcgaataaga ccgaaaatat tgttttaggc
     1021 tgaactgatt gaacggcagc ttcttccaat ttaaaaaaat taagctgcaa aaatacggtg
     1081 gcgaattgtg aattgtaaat ggtgaatggg tcgcttgcca gatgtttgtt tctcgcatat
     1141 gtacacggat acgcaggtga ttttttgtgc aaagttttct gtgagaaaat ttcttcgatt
     1201 tcgcacggag cgaaccgaga cagaaaagtc tctcacagat gtacacggat gcgcacagag
     1261 gaatttttat ggaaagtttt ctgtggtttt ctgtgatcat ccgtgagaaa atatgtcgca
     1321 cagagctaac agagaacaca gagaaaaccc tctgttaact ctgcgtgctc tgtgcgaacc
     1381 ggttcaaact tcaaatcgga attttcaata atcaacaatc aatgctcaat gttcaatttt
     1441 tgaaaccgcc gtgcaatgaa tattgaattg aatattgctt attgaacttc aaacctcgaa
     1501 cctcaaactt taaacttcaa acctcaaaca atcattccgt acttccggcg acaacaactt
     1561 taaa
//
LOCUS       DASQJI010000066         9122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1386802,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000066 DASQJI010000000
VERSION     DASQJI010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9122
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386802"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2795)
                     /locus_tag="VEV83_02220"
     CDS             complement(<1..2795)
                     /locus_tag="VEV83_02220"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK43955.1"
                     /translation="MKIKLKIVALLLLFATQLHAQQTRTVTGKVTDARTGEALPGVTI
                     KAGNSNLLTQTNSDGTFSLSLPSATQSLTFSYVGYADAQVSVTDNMTVQMTTTEKNLN
                     EVVVVGYGQTVRRQLTGSIAKVTSKEVENVPLPSFESAIQGKAAGVVIESGSGKLGQG
                     IKIRIRGTSSISASSQPLYVIDGLPITSTSQSDVNNDATNPLIDINPNDIESVEVLKD
                     ASASAIYGSRAANGVVLITTKKGRNNQKTTLQLDANTSISNPARHRHFLDAKQYVDLI
                     HIAAKNDGTFDFEHGYDLFGVNPQTVEDDIAAYEAWYEENVLDAYSLGTDWRKPEVNT
                     DWTSLLYNHNAPASQINLSASGGDNKTRFFASGFYNVQDAIVIDNKFYRYGGRLNLEH
                     NPTDRLSLGMNVAVDRSELDRVSNDNAFSTPGQLVAQLPISPLYDPQTGELNSQTLYP
                     NGLFDAQFNTDKQVTYRTIGNVFGNYNLLPSLSFRTEFGADIFNLDESAFQGKETIDG
                     GGIGKANLISSQSTTFNTNNYFTYTPKIGDNSKLNAVVGMSYLQNDTKQSSSYGEQTP
                     SDQIKNLSGTTSITFANSTDFRYTFLSYFARANYSFKDKYLFSASLRDDGSSRFGPNN
                     RYGLFPAVSAGWIISDEKFMENSSVLNYLKLRGSWGLTGNAEIGEGSYLTLYGVSNYP
                     NLPGFTPVQLSNPDLKWEKTAQTDIGLDFGIFKSRVTAEMDFYYKKTSDLLLNVNIPA
                     TTGYTFITRNLGNMQNKGFEIAINSTNIDNGGFRWTTSFNAAYNKNEVLDINGQVIEA
                     GFSLTQRAVEGFPIGEFYAQQFVGVDPKTGDAQYLGENGKPTTNFGKAARVPLGNSNP
                     DWTGGLTNTFTYKGFDLNVFFTFVSGNKIYNAGGVYMSAGFYNGFDNQTTDMMDSWQK
                     PGDQTNIPRVGWFFGSG"
     gene            complement(3106..4923)
                     /locus_tag="VEV83_02225"
     CDS             complement(3106..4923)
                     /locus_tag="VEV83_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK43956.1"
                     /translation="MKKYSRIFSYLKKYIPQILLYFLFTVLSIIFSIVSIGMLMPFLE
                     LIFNVGSGTLTELTKHSGNPMLNFVRNTLTSLINQNGKLNTLTLICSFIIVSVFLKNM
                     FLYLSSYILNPLKNSVVNRLRSDLYDKILQLPIGYFTEKRKGDLISRITNDISEVENS
                     VVGALEGWIRDPLSILFNIGFLFYLSPQLTLFLIVLIPLMGLVIGRISRSLKKQSATA
                     AIKYGESVSILDETLTGLRVIKAFNAESLLRSKFFKVNDELLHAKNHIGYRRDLASPV
                     SELMGVMMFAAILWYGGSGILTGKLALEGSVFIGYLGLFYNIITPAKSLSTSFSNMQK
                     GSAAIARIEEVLGAANTVDDNPNGKKLDHFLHSIEFRNVSFKYEDVTILKDINLKIEK
                     GKTIALVGSSGAGKSTLADLVPRFHDVSCGEIVIDNLNIKDYSLKSLREQISIVTQEP
                     ILFNDTIANNIALGEQNARQAAIEHAAQVANAYNFIQHKEKKFDSNIGDRGSKLSGGE
                     RQRLTIARAVLKNPPILILDEATSSLDTESERLVQDAINKMMENRTSIVIAHRLSTIR
                     HADEIIVLQKGEIAERGTHDSLMRAEGIYYRLVQMQEVR"
     gene            5088..5471
                     /gene="rbfA"
                     /locus_tag="VEV83_02230"
     CDS             5088..5471
                     /gene="rbfA"
                     /locus_tag="VEV83_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HYK43957.1"
                     /translation="MEEGKRQKQIAAVLSEEINDIFRRLSLNMINGGMVSISSIKVTP
                     DLLEARIYLSMYKVDDQNAALKKIEAQSWEIKRELANRVKHQLRRIPVLKFYIDDTLD
                     HVFRMEELFKQINQQQQTPPSPKGE"
     gene            5515..6732
                     /locus_tag="VEV83_02235"
     CDS             5515..6732
                     /locus_tag="VEV83_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK43958.1"
                     /translation="MNFLFAWRYFKSKKSTNAINIIAWISMLAIMVSTAALIIVLSVF
                     NGFEGLVKSLYGDFYADIKILPAEGKFITSDSSLVQKIKSTQGVSEISFVVEEKAVLV
                     NGDYQTIVFLKGVDANYDRVNKLQRYITAGKYDLGTTDAPAIIAGAGIANAVGADPRS
                     PLSNLVLYLPNRKAKNFSSLDAMHSFVMKPAGIFSVQQEFDDKYAFTNLPFVQYMLDL
                     DANQYTGIEISVTNQDDINKISERLANIAGKKFVVQTRYQQNQSLFTVMQIEKWVIYA
                     ILSLILLVAAFNMIGSLTMLVLEKEKDIAVLKAMGATNERIQNIFLSEGFLLAGAGGI
                     IGMLIAFVICYAQIKYKLIKLEGGTFIIDYYPVKMVAPDFILVTITVLIVSLVASWIP
                     AKKAATQFFSLKS"
     gene            complement(6736..8664)
                     /gene="dxs"
                     /locus_tag="VEV83_02240"
     CDS             complement(6736..8664)
                     /gene="dxs"
                     /locus_tag="VEV83_02240"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HYK43959.1"
                     /translation="MHIHAGPLLSTINSPDDLKKLSRDQLFQVCDELRQYIIDVVSVY
                     GGHFGASLGVVELTTALHYVYNTPYDQVVWDVGHQAYGHKILTGRRDNFMTNRKYKGL
                     SGFPKRSESEYDTFGVGHSSTSISAALGMAMAARYKNEKDRKAVAVIGDGAMTAGLAF
                     EGLNHAGVADADLLVILNDNCMSIDPNVGALKEYLTDITTSPVYNRLRDDIWHLLGKL
                     PAGKKFTRDMAAKLEASMKGLVSKSSNLFEALKFRYFGPIDGHNITKLVDTLKDLRKI
                     PGPKLLHIITVKGKGYALAEQDQTKWHAPGLFDKVTGEIYKKKFDLPQPPKYQDVFGH
                     SIIELAEKNDKILAITPAMPSGSSLKFMMEAMPDRAFDVGICEQHAVTVSAGLATQGM
                     RVFCNIYSSFMQRAYDQVIHDVAIQNLPVVFCLDRAGLVGEDGPTHHGAYDIPYMRCV
                     PNMIVSAPMNESELRNLMYTAQLESLQNPFVIRYPRGEGVMSEWKTPFREIKIGTGRK
                     LKDGEGIAILSFGHPGNFATAAIRELKTEGINPAHYDLRFVKPIDEELLHEVFREFDK
                     VITVEDGTVVGGFGSAVLEFMNENNYSAQIKMLGIPDRIIEHGSPKELHHECGYDAAA
                     IAEAVRLMVKTSNTLVAS"
     gene            8842..>9122
                     /locus_tag="VEV83_02245"
     CDS             8842..>9122
                     /locus_tag="VEV83_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43960.1"
                     /translation="MRRNQLAYWWCQLAGWTFYCSSMFFFIWIFHIQITSIFVFRLLL
                     SVSFGLLFTHILRFIILKFKLLPPIFGKQWIDLFTITLIVCVTYSFVSST"
BASE COUNT         2429 a         2117 c         1950 g         2626 t
ORIGIN      
        1 tacccgctac caaaaaacca tccaacacgc ggtatatttg tttggtctcc cggcttctgc
       61 cagctatcca tcatatccgt tgtttgatta tcgaaaccgt tgtaaaaccc ggccgacata
      121 tatacaccgc ccgcgttata aattttattg ccacttacga acgtgaagaa aacattcaga
      181 tcaaaacctt tgtaggtaaa cgtgttcgtc aggccgccgg tccaatcggg gttggaattt
      241 ccgaggggca ctctcgcagc tttcccaaag tttgttgtag gttttccatt ctctccaaga
      301 tattgcgcat cacctgtttt cggatcaaca cctacgaatt gttgcgcata aaattcgccg
      361 atcgggaatc cttcgactgc gcgctgcgtt aaactgaaac ccgcttctat cacctggccg
      421 tttatatcta gcacctcgtt cttattgtat gccgcattaa atgaagtggt ccacctgaaa
      481 ccaccattgt caatgtttgt tgagttgata gcgatttcaa atcctttgtt ctgcatattg
      541 ccaaggttac gcgtaatgaa cgtgtagcct gtcgtcgcag gaatatttac attgagcaac
      601 aaatcagacg tctttttata ataaaaatcc atttcggcag tcacgcggct tttgaaaatg
      661 ccgaagtcaa gaccgatatc tgtttgagcc gttttttccc atttcagatc agggttggat
      721 agttggacag gagtaaatcc aggcaggttc gggtaattgc tgactccata caaagtcaga
      781 tagcttcctt caccaatttc cgcattacct gttagccccc aacttcctct caactttaga
      841 taattgagaa ctgaactgtt ctccatgaat ttttcgtcac tgatgatcca acctgcagac
      901 acggcgggaa acaatccata gcgattattt ggtccaaacc tggacgaacc atcgtcgcgt
      961 aaactggccg aaaaaagata cttgtctttg aatgaataat tagcgcgcgc gaaataggaa
     1021 aggaatgtgt atctaaaatc tgttgaattg gcaaatgtta tagaagtagt accactcaga
     1081 ttcttgattt gatcagacgg cgtttgctcg ccatatgaag aggactgttt agtatcgttc
     1141 tgcaaataac tcatgccgac aacggcattt agcttgctgt tgtcaccgat tttcggcgtg
     1201 tacgtgaaat aattgttcgt gttgaaagtg gtcgattgag aactgatcag gtttgctttc
     1261 ccaattcccc caccatcaat cgtttcctta ccctggaaag ccgactcatc gaggttaaaa
     1321 atgtccgcgc cgaattcggt tcgaaaactc aacgatggaa gtaagttata gttgccgaaa
     1381 acgtttccga tcgtgcggta agttacctgt ttgtcagtat tgaattgtgc gtcgaacaat
     1441 ccattcggat aaagtgtttg actatttagt tccccggtct gcggatcata caaaggcgat
     1501 ataggtagct gcgcaaccaa ctgtcccggc gttgaaaatg cattatcatt acttacacga
     1561 tctaattcgc tacggtcaac ggccacattc atgccgagcg ataaacgatc ggtcggattg
     1621 tgttcaaggt tcaaacggcc accataacga taaaatttat tgtcgatcac aattgcatcc
     1681 tgcacattat aaaaacccga tgcgaagaac cgcgttttgt tatcaccccc ggacgccgaa
     1741 agattaattt gactcgccgg cgcattatgg ttgtatagca gggatgtcca atctgtgttc
     1801 acttcaggtt tccgccagtc tgtcccaagc gaataagcgt caagcacatt ttcttcatac
     1861 caggcttcat aggccgctat atcgtcttct accgtttgag gattcacgcc gaatagatcg
     1921 tatccatgtt cgaaatcaaa cgtaccgtca ttcttggcag cgatgtggat cagatcaacg
     1981 tattgcttag cgtctaaaaa atgccggtgg cgtgccgggt tactgatgct ggtattggca
     2041 tctaattgaa gtgtagtttt ttgattatta cgtccttttt ttgtggttat taatactact
     2101 ccgttggctg ccctcgaccc atagatcgca gatgcagacg catctttcaa tacttctacc
     2161 gattctatgt catttggatt gatgtcgatc aacggattcg ttgcgtcgtt gttcacatcg
     2221 ctctggctgg ttgaagtgat cggcagcccg tctattacgt agagtggttg gctgctcgca
     2281 gaaattgatg atgtgccccg gatacggatc ttgatgccct ggccgagctt accgctaccc
     2341 gattcgatca caacgccggc cgccttcccc tgtatggcag attcaaaact cggtagcggc
     2401 acattctcta cttccttcga tgttaccttg gcgatcgacc ccgtcaattg cctccgtact
     2461 gtttgaccgt atcccacgac aaccacctca ttcaaattct tttcagtcgt cgtcatttgc
     2521 acagtcatgt tatccgttac tgaaacctgc gcatccgcat accccacgta agaaaatgtc
     2581 aaactttgag tagcagacgg tagtgaaagt gaaaatgtcc cgtctgagtt tgtttgtgtt
     2641 agtagatttg aattaccggc cttgatcgta acgcccggca gcgcctcgcc ggtcctggcg
     2701 tctgtgacct taccggtaac cgttcttgtt tgctgagcat gtaactgcgt cgcaaacaat
     2761 aaaagcagtg caacaatttt tagtttgatc ttcataaaaa cgtatttgag attaagaatt
     2821 atacaggatt attcaggata tcctcagttt gacatagaat aaggcacgac aaaaatgctc
     2881 ccttttctga cagacaccta aatcagggga aacgctgatt tatttttgct cacgcacgat
     2941 taaatgacaa attaatggca aaagacatgt gtgctttcac cgacaaaatt actcaaaccg
     3001 gaaatttggt tactgaaaaa ggattttctg ggattgaagt tacagaactc tactcgcgaa
     3061 cggaacgttt tacgagtcgg ccagggtaac attttttttt gacaactatc ttacttcctg
     3121 catttgtaca aggcggtaat aaattccttc agccctcatc aaagaatcgt gtgtacctct
     3181 ttccgcaatt tctccttttt gcaacactat tatttcatcg gcgtgcctga tggtcgataa
     3241 ccggtgcgcg ataacgatag acgtcctgtt ctccatcatc ttattgatcg cgtcctgtac
     3301 taatctctca ctttcggtat ctaacgacga agtggcttca tcaagtatga gtatgggtgg
     3361 gttttttagg acagcccgtg cgatggtaag tctttgcctt tctccaccgc taagtttgct
     3421 gcccctgtcg ccgatatttg aatcgaattt tttttcttta tgctgaatga agttgtacgc
     3481 gttggccact tgtgcagcgt gttcaatcgc cgcctgcctt gcgttctgtt ctccaagcgc
     3541 aatattattc gctatcgtgt cattaaataa aataggctcc tgcgttacaa tgcttatctg
     3601 ttctctcaaa ctttttagtg aataatcttt gatgttcaaa ttatcgatca caatttcgcc
     3661 gcagcttaca tcgtgaaatc gcggtacaag gtcagcaagc gtgcttttgc cggcaccgga
     3721 tgaaccaacc aacgctatcg tttttccttt ctcgatcttc aggttgatat cttttaagat
     3781 ggttacatcc tcatatttaa aacttacatt cctgaattca atgctatgca aaaaatgatc
     3841 gagtttcttc ccattgggat tgtcatcaac cgtgtttgct gctcccagta cttcctcaat
     3901 gcgtgcgatg gcagcacttc ctttttgcat attgctgaac gaagttgata acgatttcgc
     3961 cggtgtgatg atattataaa acaacccgag gtatcctatg aacaccgacc cttccagcgc
     4021 cagtttgccg gtgagtatac cgctaccacc ataccacaat attgctgcaa acatcatcac
     4081 tcccatcaac tcactcaccg gggaagcaag atcgcgcctg tagccaatat gattttttgc
     4141 atgtaacaac tcatcgttca ccttaaaaaa ttttgaacgc aatagcgatt cggcattaaa
     4201 tgctttgatc acgcgaagac cggtaagagt ttcatccagg atcgaaacgg attcaccgta
     4261 tttaatcgct gccgttgccg attgtttttt taaggaacgc gaaatgcggc cgatgaccaa
     4321 tcccatcagc gggatcagta caatgagaaa cagggtaagt tgcggactta aataaaaaag
     4381 aaagccaata ttgaaaagaa tagataacgg gtcgcggatc catccttcca gtgcgcctac
     4441 aactgaattt tcaacttccg aaatatcgtt tgtaatgcgg ctgatgagat cgccttttcg
     4501 tttttcggta aaatagccga tcggtaactg caggatctta tcgtacaagt cgcttcttaa
     4561 cctgttcact acagaatttt tgagcgggtt caaaatgtaa gacgacaaat acaaaaacat
     4621 gttttttaaa aaaaccgaaa cgatgatgaa actgcaaatg agcgtgagtg tgttcagctt
     4681 tccattttgg ttgatcaggc ttgtcagcgt gttcctgacg aaattcagca tagggtttcc
     4741 tgagtgtttc gtaagttccg taagcgttcc cgatccgaca ttaaaaatca attctaaaaa
     4801 tggcatcagc attccgatcg agacaattga aaagatgatc gacagaacgg tgaaaagaaa
     4861 gtataaaaga atttgaggaa tgtatttttt taaataagaa aagatcctgg agtatttttt
     4921 catgtgtcga ttccgatttt tttcaaaagg cacatgcctg gctgtccact gacaggtaag
     4981 tcgtccggcc gcgatcggac ttttcatttg ttataattag cgcttgcagc aagattgagc
     5041 ggcagcatag cgtaattcgg gctaatttta cctacaaagg taatagtatg gaagaaggta
     5101 aaagacaaaa acaaatagcg gcggttttat cggaagagat caatgatatt ttcagaagac
     5161 tgagcctgaa catgatcaac ggagggatgg tgtcgatctc atccatcaag gttactccgg
     5221 acctcctcga ggcgcgcatt tacttaagca tgtataaagt tgacgatcaa aatgcagcct
     5281 taaaaaagat tgaagcacag agctgggaaa taaaacgtga gcttgcaaat cgcgtaaaac
     5341 accagctccg ccgcatcccg gtcttaaaat tttatattga cgacacactc gatcatgtat
     5401 ttcgtatgga agaattgttc aaacagatca atcagcaaca acagacgccc ccatccccta
     5461 aaggggagta atatccatga cccgaaacca gtgaacttgt aaacttgtaa acttttgaat
     5521 tttctcttcg cctggcgata tttcaaatca aaaaaatcta cgaatgccat caatatcatt
     5581 gcatggataa gcatgcttgc cattatggtc agcacggcgg cgcttatcat tgtgctcagt
     5641 gtatttaatg gtttcgaggg tttggtgaaa agcctttacg gtgatttcta cgcagacata
     5701 aaaatacttc cggctgaagg aaagttcatt acctccgatt cttcgctcgt tcaaaaaatt
     5761 aaatcaacgc aaggcgtgtc ggaaataagc tttgtggtag aggagaaggc agtgctggtg
     5821 aatggcgatt atcaaacaat cgtttttttg aaaggcgttg atgccaacta tgatcgcgta
     5881 aataaattgc aacgatatat caccgcaggc aagtacgatc ttggcacgac agatgcgcca
     5941 gcaattattg caggcgccgg cattgcgaat gcagttggtg ccgacccacg gtctcccttg
     6001 tcaaatctgg tattgtacct gccaaaccgg aaagcaaaaa actttagtag cctggatgcc
     6061 atgcattcat tcgttatgaa acccgctgga atattttctg ttcaacagga atttgatgat
     6121 aaatacgcat ttaccaacct cccgtttgtt caatacatgc tcgacctgga tgcaaaccaa
     6181 tacaccggca ttgagatatc tgtaacgaac caggatgaca tcaacaagat cagtgagcgg
     6241 ttggcgaata tcgcagggaa aaaatttgtg gtacaaacgc gttatcagca aaatcaaagt
     6301 ttattcacgg tgatgcaaat agagaaatgg gtgatctatg ctatcctgtc gcttatcctg
     6361 ttggtagcag catttaacat gatcggttct ttgacgatgc ttgtactcga aaaagaaaag
     6421 gacatagcgg tgttgaaagc gatgggagcg accaacgaac gcattcaaaa tatttttctc
     6481 agtgaagggt ttttgcttgc cggtgcgggc ggaataattg gaatgctcat tgcattcgtg
     6541 atctgctacg cgcagataaa atataagctg atcaaactcg aagggggaac ttttattatt
     6601 gactattacc cggtaaagat ggtcgccccg gattttatac tggttaccat taccgtcctg
     6661 atcgtctccc tggttgcgtc atggatacca gccaaaaaag cggcgacgca gttcttctca
     6721 ctgaaaagtt gagcgctaag aagcaacaag cgtattactt gttttcacca ttaaccgtac
     6781 agcttctgca attgccgcag catcgtaccc acattcgtga tgaagttctt tcgggcttcc
     6841 gtgctcaatg atgcggtcag ggataccgag catttttatt tgcgcggaat aattattttc
     6901 attcataaac tcaagaaccg ccgacccaaa tcctccgaca acagtgccgt cttccactgt
     6961 gatcaccttg tcaaattctc taaacacttc atgcagcaac tcttcgtcga tcggttttac
     7021 gaaacgcaga tcataatgcg cagggttgat cccttcagtt ttcaactccc gaattgcggc
     7081 cgttgcaaaa tttcccgggt ggccgaaact gaggattgca atcccttcac catctttcaa
     7141 cttcctgcca gtccctatct tgatttccct gaatggtgtc ttccactctg acatcacgcc
     7201 ttcaccgcgg ggatagcgga tcacgaaagg attttgaagg ctctcaagtt gagcggtgta
     7261 catcaaattg cggagttcac tctcattcat tggcgcactc acgatcatgt tcggcacaca
     7321 gcgcatgtag ggaatgtcgt aagcgccatg gtgcgtgggc ccgtcctcac ccacaagtcc
     7381 ggcgcggtcc aaacaaaaga ccaccggaag gttttgaatg gctacatcgt gtatgacctg
     7441 gtcatatgcg cgttgcataa acgatgagta aatgttacag aacacacgca taccctgtgt
     7501 agcaagtccg gcgctcaccg ttacggcatg ttgttcacaa attcctacat caaacgcacg
     7561 atccggcatc gcttccatca tgaacttgag cgaggaaccg ctcggcatgg caggcgttat
     7621 tgccaatatc ttatcattct tttcggctaa ctcaataatt gaatgaccga aaacgtcctg
     7681 gtatttgggc ggctgtggaa gatcaaattt tttcttatag atctcgccgg ttactttatc
     7741 gaacaacccg ggggcatgcc atttcgtttg gtcttgttcg gcaagcgcat atcctttgcc
     7801 tttcacagta ataatatgaa ggagctttgg ccctggaatt ttgcgtaggt cttttaatgt
     7861 gtcaacaagt ttggttatgt tatgaccgtc gataggtccg aagtaacgaa acttcaacgc
     7921 ttcgaagaga ttactgctct tgctcaccag gcccttcata ctcgcctcga gctttgctgc
     7981 catgtcccgc gtaaattttt tccctgcagg cagtttgcca agcaggtgcc aaatatcgtc
     8041 tcttagcctg ttgtaaaccg gggaagtagt gatgtcagtg aggtattcct ttaacgcacc
     8101 aacattcgga tcgatgctca tgcaattatc attcaaaatc accagcaggt ccgcatcggc
     8161 aacaccagca tgattcaatc cttcaaacgc aagtcctgcc gtcatcgccc cgtcccctat
     8221 aacagcaacg gcctttcggt ctttttcatt tttgtaacgg gcggccatgg ccatcccaag
     8281 ggcagccgaa atagaagtag acgaatgtcc aaccccgaac gtatcgtatt cgctttcgct
     8341 acgtttggga aagccgctga ggcctttgta tttgcgattc gtcatgaaat tatctcgacg
     8401 gcctgtcaat atcttatggc cgtatgcctg gtggccaaca tcccacacca cctggtcata
     8461 aggtgtgttg tacacatagt gcagcgctgt cgtaagttca acgacaccca agctggcgcc
     8521 aaagtgaccg ccgtacacac tcaccacatc tatgatgtat tggcgcaatt cgtcgcagac
     8581 ctggaaaagt tgatctcttg aaagtttctt aagatcatcg ggggaattaa tagtgctgag
     8641 caaaggcccg gcgtgtatat gcatctaaca aacgattaga ttgtaaaatt agtccatttc
     8701 gtcctttgtg tctaaactat aaacgttttt ggattgtttt cggtttggcg tagcgtaatt
     8761 ttaaaccaga cagacggcaa atttgccttt aatcaatttt gacaaaaaag cggcctgcat
     8821 aactgattaa atttgcgaaa gatgagaaga aaccagttag catattggtg gtgccagctt
     8881 gccggctgga ctttctattg ttcctcgatg ttctttttca tctggatctt tcatatacag
     8941 atcacgtcta tattcgtttt ccggctcttg ctgtctgtct ccttcgggct gctcttcacg
     9001 catattttgc gcttcattat tctaaaattc aaattgctgc cgcctatttt cggcaaacaa
     9061 tggatcgatc tttttacgat cacgctcatc gtttgcgtca cctacagttt tgtgagcagc
     9121 ac
//
LOCUS       DASQJI010000067         2991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2461714,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000067 DASQJI010000000
VERSION     DASQJI010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2461714"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..319
                     /gene="rpsU"
                     /locus_tag="VEV83_02250"
     CDS             122..319
                     /gene="rpsU"
                     /locus_tag="VEV83_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HYK43961.1"
                     /translation="MLIIDSKDCENIDKALKKYKKKFEKSKILLQLRERQTFTKPSVK
                     RRNQVLKAVYKQKIASGKIEI"
     gene            373..1269
                     /locus_tag="VEV83_02255"
     CDS             373..1269
                     /locus_tag="VEV83_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HYK43962.1"
                     /translation="MSYPQYPQLQAFLDYLRFEKRYSQHTLISYQNDLDQFLTFLLSQ
                     FDGPAVGEITSVMVRSWLAELKEDGLSSKSINRKISSLKSFFKFMIRNGEIESTPLSS
                     VSAPKLNKRLPVFVEQKDIRTLFEHVEFTDDWDGRTQRMILEVFYNTGIRISELINLK
                     ETQVDAAYSQVKVLGKGNKERIIPISNDLVAALLKYVKEKPAAGKHVPNVFVSEKGRP
                     LYAKQVYNIVAKNLNLVTTVQKKSPHILRHSFATHLTNNGADLNAVKELLGHSSLAAT
                     QVYTHNSIEKLKEVFKRAHPKA"
     gene            1431..1730
                     /locus_tag="VEV83_02260"
     CDS             1431..1730
                     /locus_tag="VEV83_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HYK43963.1"
                     /translation="MNLNIETVHFAADVKLTEYVRKKAQKLNTFHDRIIKVDVFLKLD
                     NVVHNIKDKIAEIRIFVPRHSFFVKACTKSFEESFDTALDSAINQIKRKKEKQAA"
     gene            2048..2120
                     /locus_tag="VEV83_02265"
     tRNA            2048..2120
                     /locus_tag="VEV83_02265"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2081..2083,aa:Thr,seq:tgt)
     gene            2139..2221
                     /locus_tag="VEV83_02270"
     tRNA            2139..2221
                     /locus_tag="VEV83_02270"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2173..2175,aa:Tyr,seq:gta)
     gene            2346..2418
                     /locus_tag="VEV83_02275"
     tRNA            2346..2418
                     /locus_tag="VEV83_02275"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2379..2381,aa:Gly,seq:tcc)
     gene            2707..2778
                     /locus_tag="VEV83_02280"
     tRNA            2707..2778
                     /locus_tag="VEV83_02280"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2739..2741,aa:Thr,seq:ggt)
BASE COUNT          928 a          579 c          677 g          807 t
ORIGIN      
        1 gatggacggt aaatagcgtc gagccatgcg ctttcgcata gaacctggag ctacccagaa
       61 tttggaaatt tgctttcaat ccttatcttt gcgtcccaat aaaaatgagg taacgtttta
      121 tatgcttatt attgattcca aggattgcga aaacatcgac aaagccctaa agaaatacaa
      181 aaagaaattt gagaaaagca agatattgct ccaactgaga gagcggcaga ccttcactaa
      241 accttccgtg aaacgacgta accaggtgtt aaaggcggtt tataaacaaa agatcgcgag
      301 cggcaaaata gagatctaaa gttttttaga tataggaaac agccataagg ttattaactt
      361 tatggctgtt ttatgtcata tccacaatat cctcaactgc aggccttcct tgactacctg
      421 cgttttgaaa aacgctattc tcaacacact ttaatatctt atcaaaacga cctggaccaa
      481 ttccttactt ttcttttatc gcaatttgat ggtccggccg ttggagaaat aacttcggtc
      541 atggttaggt cgtggctggc tgagctgaaa gaggacggcc tttcgtcaaa gtctataaac
      601 cggaagatct cttcgcttaa atcgtttttc aaattcatga tcaggaacgg tgaaatcgag
      661 tcaactccat tgagcagtgt gtctgcaccg aaattaaaca aacggctgcc ggtttttgta
      721 gaacaaaaag acattcgcac gttatttgag catgttgaat ttaccgatga ctgggatggc
      781 agaacgcaga gaatgatcct cgaagttttt tataacacgg gcatccgcat tagtgaattg
      841 atcaatctaa aggaaacgca ggtagacgct gcttatagcc aggtaaaggt gctcggaaaa
      901 ggtaataagg agcgtataat acctatcagt aatgatctcg ttgccgccct gttgaaatat
      961 gtgaaagaaa aaccagccgc gggcaaacat gtgccaaacg tttttgtaag cgaaaagggc
     1021 agaccgctat atgcaaaaca ggtttataat atcgtggcaa agaatttgaa tttggtgacc
     1081 acggtgcaga agaaaagccc gcatatttta cgacatagtt tcgcgacgca tttaacgaac
     1141 aacggtgcag acctgaacgc cgtaaaagaa cttctcggtc atagcagcct ggctgcgacg
     1201 caggtttata cgcacaacag tattgagaaa ctaaaagagg ttttcaagcg cgctcatccg
     1261 aaggcttaaa gaactcaaaa aaatggctga accggcaaaa aatcaattga aaaaaaatca
     1321 tatctggtat taagttttta ccttcattga agtaaaaacg atgtcggtac aaaacagttt
     1381 ttaccgcaca gttctttcaa ttattgtctc acatttaaag cgatttgatt atgaatctaa
     1441 acattgaaac ggtgcacttt gccgcagacg tgaaactaac agagtacgta cggaaaaaag
     1501 cccaaaagct gaacacgttt cacgatcgaa ttattaaagt ggatgttttt ttgaaattgg
     1561 acaacgtggt acataatatc aaagacaaga tcgctgagat tcgaatattc gtaccccggc
     1621 acagcttttt cgttaaggca tgtacgaaat cgtttgagga atctttcgat actgcattag
     1681 attccgcaat taaccagatc aaaagaaaaa aagaaaagca agctgcttaa aaacatgggc
     1741 ctcgcaagtg cggggctttt ttttgaacat gcacaaaccc cggctcaaaa attatttcta
     1801 aaattttgct gaacaaagtt ttcgcttacc tttgccatcc cgaaaaattt cgggtttttt
     1861 tctttgaaat atatgccagg atgagtgtga ctggtaagct gttgttcgat aagccagagt
     1921 agctcagctg gtagagcatc ccgatcgcaa tcgggatggt cgggggtctt tgaaataaat
     1981 taccagagaa gctcatctgg aaagtcatag agaggcgcat gttgaatgct ttttgacatt
     2041 gttagtcgcc agagtagctc agctggtaga gcagctgatt tgtaatcagc tggtcggggg
     2101 ttcgagtccc ttctctggct cttagtgtga gctgcattgg gcagtttcca gagtggccaa
     2161 atggggcgga ctgtaaatcc gctgtctttc gacttcggtg gttcgaatcc accactgccc
     2221 acttcaattt gaaaatgatt caatttgaat atttgaaaat tgatatgttc tttgagtttg
     2281 aatgttttta aagcgttgac aattttcaaa ttgcgcccgc cttcgttaaa agttcggcgg
     2341 ataaagcggg agtagctcat ttggtagagc gatagccttc caagctatag gtggccagtt
     2401 cgagcctggt ctcccgctca gaggttagat gacagatgag ggatgacagt tgacggaagt
     2461 tcatccctgt caactgacaa cggtcaactg tcaacttttt ttgagatgcc gttgtagctc
     2521 agtggtaggc atcccgcttg tatagggaag gtcgcggttc aaagttcttt taaatgaaag
     2581 tgagaagcaa actcacaact gagtatgccg ttgtagctca gtggtaggca tcccgattgt
     2641 atcgggaagg tcgcgggttc aaagttcttt taaatgaaag tgagaagcaa actcacaact
     2701 gagtatgccg ttgtagctca gtggtagagc acttccttgg taaggaagag gtcgtgagtt
     2761 caattctcat caacggctct gagttttaaa aacgaacttg ctgagcagaa gataaagcgt
     2821 acaagagtgc gacgcaacga tgcttaattt aaattctgtc gctgggtaca gaaaaatata
     2881 aatgctaaag gctgaaagct gatagctcaa ttttaaaacc acaatacaaa aacgataaaa
     2941 atgtctaaag agacttttaa gagggacaaa ccccacgtaa acgttggtac c
//
LOCUS       DASQJI010000068         2114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_4606, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000068 DASQJI010000000
VERSION     DASQJI010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4606"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1082
                     /gene="hisB"
                     /locus_tag="VEV83_02285"
     CDS             150..1082
                     /gene="hisB"
                     /locus_tag="VEV83_02285"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008624740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HYK43964.1"
                     /translation="MKKFLFIEFDGVVIEPGSHDNDDQKFVPGVIHNLYRINKQLAYD
                     ISFVISKDSARPYSKALRLLEDESINFRIIHAGEAAGDNELAVRRDGKAFQISADNSV
                     SNVDNWEQIFQYLKSARRKISHSRTTTETKIRIDINLDGTGKYNVSTGLGFFDHMLEQ
                     FAKHGNIDLDLRVQGDLHIDEHHTIEDTAIALGESVLLALGNKKGIERYGFVLPMDDC
                     LAQVALDFGGRSWLVWDADFKREFVGEVPTEMFHHFFKSFCDGAKCNLNIKAEGTNEH
                     HKIESIFKAFAKAVKTAVAVNYDSSSLPTTKGIL"
     gene            1079..1660
                     /gene="hisH"
                     /locus_tag="VEV83_02290"
     CDS             1079..1660
                     /gene="hisH"
                     /locus_tag="VEV83_02290"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HYK43965.1"
                     /translation="MSIVIIKYNAGNVRSVNVALQRLGVEAVITDDPNEISNADKIIF
                     PGVGAAAPAMQYLQQKKLDVLIQQCEKPFLGICLGMQLLCDHSEEGNTRCLGVFSQAV
                     KKFLTNEKVPQIGWNNIYDLKSSLFNGVSENGFMYFVHSYYAECGPNTIAKTNYGVEY
                     SSGIQKDNFYAVQFHPEKSGDAGELILKNFLAL"
     gene            1657..>2114
                     /locus_tag="VEV83_02295"
     CDS             1657..>2114
                     /locus_tag="VEV83_02295"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HYK43966.1"
                     /translation="MIEVIPAIDIIDGKCVRLSQGDFETKKVYSESPLETAKQFESAG
                     ITRLHMVDLDGARQGRLINLASLSQVASNTNLKLDFGGGIKTKEDVLSVLNAGAGMIN
                     IGSIAVKQPTLVSAWIDEFGSDKILLGADVRDEKIVMHGWQVSTDIGIVE"
BASE COUNT          627 a          433 c          526 g          528 t
ORIGIN      
        1 gccgcgacgt tgtatgacta cctggtggca aatgatatag ttgttcgtaa caggagcagt
       61 caaccccttt gcgaaaactg tttgcgtgta accgtgggaa caccgcaaga aaatgaattg
      121 ctggtgcacg cattaaaaaa ctattttcta tgaagaaatt tttgttcatc gaattcgatg
      181 gcgtcgttat cgaacccggc tctcatgata acgacgacca aaagtttgta cccggggtga
      241 tacataacct gtatcgtatc aacaagcaac tggcttacga catttctttt gtgatcagca
      301 aagactcggc gcggccatat tcaaaggctt tgcggttgct tgaagacgag tcaatcaatt
      361 ttcgtataat acatgccgga gaggctgccg gcgacaatga gctggccgtt agaagggatg
      421 gaaaagcctt tcaaatttcc gcagataaca gtgttagcaa tgttgacaac tgggagcaaa
      481 ttttccagta tctcaaatct gcgcggcgaa aaatatcgca cagcagaaca accacggaaa
      541 cgaagatccg gatcgatata aatcttgacg gcaccggaaa atataatgtt tcaacgggtc
      601 ttggcttctt tgatcatatg ctcgaacaat ttgcaaagca cggcaacatt gatcttgatc
      661 ttcgcgtaca gggcgatctt cacatcgatg aacaccacac gatcgaggac accgcaatag
      721 cacttggcga gtcggtcctg cttgcactcg gcaataaaaa aggaatagaa cggtatggat
      781 ttgttttgcc aatggatgac tgcctcgcgc aggttgcgct tgatttcgga ggcaggagct
      841 ggctggtttg ggacgcggat tttaaacgtg aattcgtcgg cgaagtacca acggaaatgt
      901 ttcatcattt ttttaaatca ttttgcgacg gcgcaaaatg caacctgaat attaaggccg
      961 aaggaacgaa cgaacaccat aagatcgaat ccatcttcaa agcctttgca aaagcggtaa
     1021 agaccgctgt cgccgtaaac tacgacagtt cgtcgctgcc gacaacaaaa ggaattttat
     1081 gagcatcgtg atcataaaat ataatgccgg caacgttcgc tcagtgaatg tggcgctgca
     1141 gcgcctgggc gtcgaggctg tcatcacgga tgatccaaat gaaatctcga acgctgacaa
     1201 aattattttt ccaggcgtag gtgcggcggc gcccgcaatg caatacctgc aacaaaaaaa
     1261 actcgacgta cttatccaac aatgcgaaaa gccattcctg ggtatttgtc ttggcatgca
     1321 gttgttgtgt gatcattccg aggagggcaa tactcgctgc cttggtgtat ttagccaggc
     1381 tgtgaaaaaa tttctaacga acgaaaaagt tccccaaata gggtggaata atatttacga
     1441 tctcaaatca tctttattca acggcgtgag tgaaaatgga tttatgtatt tcgtgcacag
     1501 ttattatgcg gaatgtggac cgaacacgat cgcgaaaaca aattatggcg ttgaatatag
     1561 ttcggggata cagaaagata atttttacgc agtgcaattt caccctgaaa aatcaggtga
     1621 tgcaggcgag ctcatactaa aaaattttct tgcattatga ttgaggtgat ccctgcgata
     1681 gatatcatcg atggaaaatg tgtgcggctt tcgcagggcg atttcgaaac gaaaaaagtt
     1741 tacagtgaat cgccgttaga gacggcaaag caatttgaat cagccgggat cacgagactt
     1801 catatggttg accttgacgg agcaagacag gggaggctga ttaatttggc gtcgctgtcg
     1861 caggtggcgt ctaatacgaa cttgaaatta gattttggcg gagggataaa aaccaaagag
     1921 gatgtgttgt cagttttaaa tgcaggggcc ggcatgatca atatcggcag tatcgccgta
     1981 aaacaaccaa cacttgtttc agcatggatc gacgagtttg gcagcgacaa aatattactg
     2041 ggagcggatg tgcgcgatga aaagatcgta atgcacggat ggcaggtatc aaccgatatc
     2101 ggcatcgtgg aatt
//
LOCUS       DASQJI010000069         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_465330,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000069 DASQJI010000000
VERSION     DASQJI010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465330"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            348..>1534
                     /locus_tag="VEV83_02300"
     CDS             348..>1534
                     /locus_tag="VEV83_02300"
                     /inference="COORDINATES: protein motif:HMM:TIGR04534.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELWxxDGT repeat protein"
                     /protein_id="HYK43967.1"
                     /translation="MKPKNLLLLAVMIMYTALAGLAQNGAYKEPPAKDIFQFGQRRSL
                     PDLSKYPGISLQGTNTAFMKGINSFNANEIKKHPEEFKQQLQKGRAIGSQSFQRNHMH
                     AANGPEGNNSHSDFHLTKDLNALAESNPGNAADFYVNTSYATLHQVAYFAADDGVHGN
                     ELWRSDGTAAGTFMVKDIEPGAASTYLYNITAVNGKIYFSAATAAYGLEPWVSDGTEN
                     GTQLLMDIKPGPLWSYPTEFAGADNQVYFVSDGDFSSWGALWKTDGTTAGTKLVKSIG
                     DEGGGGTLITQPTEANGQLFFTFLNFSTFSWELWRSDGTNAGTYAVSSNTYFPSVPAQ
                     LTHYNNKLYFSADDGTGRKLWVSDGTDAGTTPAPNNNDIVIDADYLGTTFPVLNSVLY
                     IPGS"
BASE COUNT          476 a          325 c          313 g          420 t
ORIGIN      
        1 aatcgagaaa agaatatgct aaatataaat aacaagcagt attaagatat ccgctgatga
       61 ttgatcctta aagcttaaaa acgctacact aagaagagcg gttcttaggc aaatttcttt
      121 cttcaaaata aaccggtcaa agcctgttgt actgcagcgg gcttttttat ttcaaagcat
      181 tcgcactacc actattggta attgttcggc cttctctttc atcattcttt tgtggagaga
      241 atattatgta gccatcaaag actggtgatc ctgcaaattt tattttcctt gttccaaaaa
      301 aaatcaattg ctcaataaaa aatcacttca tcaaaaaaat aaatcacatg aaaccaaaaa
      361 atctactcct tctagctgta atgataatgt atacagcatt agcagggctt gcacaaaatg
      421 gcgcctataa agagcctcct gcaaaagaca ttttccaatt tggacaaagg cggtcgctgc
      481 ctgatctttc aaagtaccca gggatatctt tacagggcac aaataccgct ttcatgaagg
      541 gaatcaattc ctttaacgca aatgagataa agaaacatcc tgaggaattc aaacagcagt
      601 tacagaaggg aagggccatt ggatctcaat cttttcaaag aaaccacatg catgctgcaa
      661 atgggcctga aggcaacaat agccattcag attttcatct cacgaaggat cttaatgcgc
      721 ttgccgaaag caatcccggc aacgctgcag atttttatgt taatacctct tatgcaaccc
      781 ttcaccaggt tgcttatttt gctgcggatg acggggtaca tggaaatgaa ctctggagaa
      841 gtgatggaac tgctgccggc acttttatgg taaaggatat tgaacccggc gccgcatcta
      901 catatttgta caacattact gctgtaaatg gcaaaatata tttttccgcg gccactgcag
      961 catatgggct tgaaccctgg gtatcagatg gaactgaaaa cggcacacaa ctgttgatgg
     1021 atatcaaacc cggaccgttg tggagttacc ccacagaatt tgccggggcg gacaaccagg
     1081 tatattttgt atcagatggc gatttttctt catggggagc actatggaaa acagatggaa
     1141 ctacagccgg tacgaaactg gtaaaaagta tcggcgatga gggcggtgga ggtacgttaa
     1201 taactcaacc gacagaggca aatggccagc tattctttac ttttctcaat tttagtactt
     1261 tttcctggga gctttggaga agtgatggca ctaatgcagg aacatatgct gtcagcagca
     1321 atacctattt tccttccgtc cctgcacaat taacccatta caataataaa ctttattttt
     1381 ctgcagacga cggtaccggt cgcaaactat gggtatccga cggtaccgat gccggcacta
     1441 cgcctgcacc gaacaataat gatatagtaa tagatgccga ttatttagga acaacttttc
     1501 cggttctgaa cagtgtttta tatatacctg gctc
//
LOCUS       DASQJI010000070         4481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1847780,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000070 DASQJI010000000
VERSION     DASQJI010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4481
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847780"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2203
                     /locus_tag="VEV83_02305"
     CDS             <1..2203
                     /locus_tag="VEV83_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYK43968.1"
                     /translation="VAVVKQPNTNLIELSDAVKKKAAELQKILPPGITIRPYYVQADF
                     VNDSIKSVSDSLWIGLVLAIIVAIIFLRSFKASATILITIPVTICLTLISMYAAGYTL
                     NIMTLGAIAAAIGLIIDDAIVVVEQIHRTHEEHPDEPTTTLVQKAIRYLWPAMVGSSC
                     STIVIFIPFELMTGVAGAYFKVMTNTMIITLVCSFFVTWLFLPVIYLILTKQKKPTKK
                     NAENVVEVKKQRWVSFFIFRPYISIIIIIAFAAGIFLILPQLETGFLPEMDEGSIVLD
                     YWSPPGTSLQETDRMLRQAEKIILSVPEVETYSRRTGTQMGFFITEPNTGDYLIQLKK
                     DRDRSTEDVINDIRQKIESTQPALRVDFGQVMGDMLGDLMASVQPIEIKIFGDDIEKL
                     HQYSKRVSDIVENIEGTADVFNGIVIAGPSVSVVPENTQLAQFGVTPSDLQSQVQLAL
                     EGLQAGSILEKEQLSPVKIIYPYSNTRSVADLQKMQIFLPSGKLRPLTDLAAIRFDSG
                     DAEIERENLQSMGVVTGRLEHRDLGSVMKDIQQKVSSELVLPQGYHIEYGGAYAQQQQ
                     SFKELLMILIAASLLVFGVILFLYKDFLVALSILIIAVLGIAGSYVALYITNTALNVG
                     SYTGLIMIVGIIGENAIFTYLQFRDSLQTKTVDESIVYAISTRLRPKLMTALGAIIAL
                     MPLALGIGTGAQLHQPLAIAVIGGFIAALPLLLIVLPSMLTVITRKKEAAP"
     gene            complement(2245..2520)
                     /locus_tag="VEV83_02310"
     CDS             complement(2245..2520)
                     /locus_tag="VEV83_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43969.1"
                     /translation="MEPRKQLALMDKIIRELDDLQNSQTAVLKKIAQIEADNINLNVD
                     LLADGLPDIHQEVDDAVQKVTQLLDGFAEVRNKYEQDNKAALAEPVA"
     gene            2900..>4481
                     /locus_tag="VEV83_02315"
     CDS             2900..>4481
                     /locus_tag="VEV83_02315"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HYK43970.1"
                     /translation="MFRSFPSCFLILLAFTACNTANKTESANNNSDASFNDFQPRFLD
                     AYWQENPSAAIFAGYGKYYDRLVIPDSNAFLHIVNFSKAWLDSLHDYKYNSLSDDNKI
                     NYNIIQNQLQSTIWYIDTFRNQHWDPSSYNLGGDCYYLLNQNYAPLTERLQTLSKHIQ
                     NASDYYAAAVKNIDHPTKEYTQLAISQNEGSLDVFGRGLSDSIKASTLAQPEKDTLQQ
                     RISKTIEAIKNYVGALKALVADKNYSVRDFRIGKDLFTQKFKYDLVTDYTPEQMFAKA
                     DSAKHVYHKEMFRIANELWSKYCADQQKPNDSLMLIKAVLDKISLNHASPQHVVDTAK
                     ELVHDLEHFIISKHLFHYDTTHALKVRIMPAYMAGVSLANAEFIPPYQKSGTTYYNIM
                     DLSKMPAPDAESELREYNTYSLQFLSIHEAMPGHCMQGVYNNRNAGSKIKSVFGNGAM
                     IEGWAVYCEQMMMENGWGNNAPELWLTLYKWRLRECSNVLIDYGIQCLNYTEDDVKKL
                     LKNETFQEDGQIKEKYHRA"
BASE COUNT         1301 a         1017 c          989 g         1174 t
ORIGIN      
        1 ggtggcggtt gtaaaacaac caaacacaaa tcttatagag ttgtcagatg cggtgaagaa
       61 aaaagcggcc gagctgcaga agatcctgcc tccgggcatc accatacgtc cgtattacgt
      121 gcaagccgat tttgtgaatg attccatcaa aagtgtaagc gacagcttgt ggattgggct
      181 ggtgctcgcg atcattgtcg caattatttt tctgcggtcg ttcaaagcaa gtgcaacgat
      241 cttaattacg atccctgtta ccatctgtct cacgcttata agcatgtatg ctgcaggtta
      301 cacgctgaac atcatgacgc tcggagcaat cgcagcagct atcggcctta tcattgacga
      361 tgcgatcgta gtagttgagc aaattcatcg cacgcacgaa gaacatccag atgaaccaac
      421 gacaacgctt gtacaaaaag caatcagata tttatggccg gccatggtag gttcatcgtg
      481 cagcacgatc gtaatattca ttccatttga actgatgacg ggcgttgccg gcgcttattt
      541 caaagtgatg accaatacaa tgatcattac attggtgtgt tcgttctttg ttacgtggct
      601 attcctcccg gttatctatc tcatccttac caaacaaaag aaaccaacta agaagaacgc
      661 agaaaacgtt gttgaggtaa aaaagcagag atgggtctca ttttttattt tcaggcccta
      721 catcagtatc ataattatta tcgcgtttgc agcgggcatt tttttgatat tgcctcaact
      781 agaaaccggc tttctgccag agatggacga aggaagcatc gtgttggatt attggtcgcc
      841 tccgggtacc tctttgcagg aaaccgacag gatgctgcgg caggcagaaa aaataatttt
      901 atcagttccc gaggttgaaa cgtattcgcg gcgaacaggt acgcaaatgg gtttttttat
      961 tacagagcca aacaccggcg attatcttat acagctcaaa aaagaccgcg accgttctac
     1021 cgaagatgtt atcaacgaca ttcggcaaaa aatagaatcc acgcaacctg cattgcgcgt
     1081 cgatttcgga caggtaatgg gtgatatgct cggcgacctc atggcctcag tgcagcctat
     1141 cgaaataaaa atttttggtg atgatattga aaagcttcat caatattcaa agcgagtatc
     1201 agacattgtt gaaaacatcg aaggcactgc ggacgtattt aatggaattg tgatcgctgg
     1261 tccgtctgtg agtgttgtac ccgaaaacac gcagcttgcg cagtttggag taacgccatc
     1321 ggatctgcaa tcgcaggtgc agttggcact tgagggtttg caggccggaa gcattttaga
     1381 aaaggaacag ctatctcctg tgaagatcat ttatccgtat agtaacaccc gcagcgttgc
     1441 tgaccttcag aaaatgcaaa tctttttacc atccggcaaa ctaaggccac tcaccgacct
     1501 cgcggccatt cgttttgatt caggcgatgc agaaattgaa agagagaatc ttcagtcgat
     1561 gggtgttgtt accggcaggc tcgagcatcg tgatctcggt agtgtcatga aagacataca
     1621 gcaaaaagtt tcttcagaac tcgtgttgcc acagggatat catattgaat atggcggagc
     1681 ttatgcgcag caacagcagt cgttcaagga actgctgatg atcttaatag cagcaagcct
     1741 cctcgtattt ggcgtgatac tttttcttta caaagatttt cttgtcgcct tatcgatcct
     1801 catcatagcg gtgcttggca tcgcaggcag ttacgtggcg ttgtatatta ccaatacggc
     1861 attgaacgtt ggcagttata ccggcctcat catgatcgtt ggcatcatcg gtgaaaacgc
     1921 aatttttact tatctgcaat ttcgcgattc gttgcaaacg aaaacggttg atgagtcgat
     1981 cgtgtatgcc atctccacac ggcttcgtcc aaaattgatg accgcgctgg gtgccatcat
     2041 tgcgctcatg cccctggctc ttggcattgg aaccggtgcg caactccatc aaccattagc
     2101 gatcgcggtg atcgggggtt tcatcgcggc gttaccttta ctgttgatcg tactgccatc
     2161 gatgctgacg gtgatcacaa gaaagaaaga agcagcacct tgatcgagcc tttggccgaa
     2221 acaaatttga cgcgtacacg aacactacgc aaccggttca gcaagtgcag ccttattatc
     2281 ctgctcgtac ttatttctta cttcagcaaa tccatccagc agttgcgtca ctttttgtac
     2341 ggcgtcatcc acttcctggt gaatgtccgg caaaccgtca gcgagcagat caacgttcaa
     2401 attgatatta tcagcctcaa tctgcgcgat ctttttcaaa acggcggtct gactgttctg
     2461 caggtcatcc agttcccgaa tgatcttatc catcagggcc agttgtttgc gaggttccat
     2521 aattgtgttt tgttttcggc aacaaacacc acgccaacga ccaatggctg cagaaaggga
     2581 ttgggaatat ggttcgtgaa ggcatgtttc acaagaaaag agagtctatc aaataatctc
     2641 gcccacatca ggcgtttgga accgtcatgc ccgaccgcaa tcatcaataa gtgcactttg
     2701 cgcgtgatcg ggcatctcga atttaagaag gtctacgtta cgcaatcaag cgccacttga
     2761 ataaaaccag ttggtatgta agagcaggct gcgcacccgg acaggtcgca ggaatgacgg
     2821 atctaatgta cgggggagca aacaccacaa actttttcgt caggtaaatc ttctttactt
     2881 tacgaaccaa accacgatca tgttcaggag tttccctagc tgcttcctta tattgctcgc
     2941 attcactgca tgcaatacgg cgaacaaaac cgagtcggct aataataata gcgatgcatc
     3001 attcaacgat ttccaaccac gttttctgga tgcatattgg caggaaaatc catctgcagc
     3061 aatttttgca ggctatggca aatattatga ccggcttgta atacccgata gcaacgcgtt
     3121 tctgcatata gttaattttt caaaggcatg gctcgattca ttacatgatt acaagtacaa
     3181 cagtttgtct gacgacaata agatcaacta caatatcatc caaaaccagt tgcaaagcac
     3241 catatggtac atcgacacat tcaggaatca acattgggat ccctcatcat ataatcttgg
     3301 tggtgactgt tattacctgc tcaatcaaaa ctacgcgccc ttgactgaac gtttacaaac
     3361 gctttcaaag catattcaaa atgcatcaga ttattatgca gccgcagtaa agaatatcga
     3421 ccatccaact aaagaataca cgcaattagc cattagccag aacgaaggca gcctcgatgt
     3481 atttggccga ggactttcag attccatcaa agcttcgaca cttgctcaac ccgaaaaaga
     3541 tacattacag caacgcattt caaaaaccat cgaagcgata aaaaattatg ttggcgcatt
     3601 aaaggctctt gtcgccgaca aaaattattc ggtccgtgat ttccggatcg gcaaagacct
     3661 cttcacccag aaattcaaat acgatcttgt aacagattat acacctgagc aaatgtttgc
     3721 gaaagcggac tccgcaaaac atgtttatca caaggaaatg ttccgcattg ccaatgaact
     3781 gtggtcgaaa tattgcgccg atcagcagaa accaaatgat tcgttgatgc tgataaaggc
     3841 tgtgctcgac aaaatttcat taaatcatgc ttcaccgcag cacgtcgttg acaccgcaaa
     3901 agaacttgtc cacgaccttg aacacttcat catcagtaaa catctttttc attacgacac
     3961 aacccatgct ttaaaagtac gaatcatgcc tgcgtacatg gccggagttt cattagcgaa
     4021 cgcagagttt atcccgcctt atcaaaaatc gggaacaaca tattacaaca ttatggactt
     4081 gtcaaaaatg cctgcgcctg atgctgaaag cgagctaagg gagtacaata cttactcact
     4141 gcagtttctt tcgatacacg aagcaatgcc cggccattgt atgcaagggg tatataacaa
     4201 taggaacgca ggtagtaaaa taaaatctgt atttggtaac ggagctatga tagaaggctg
     4261 ggcggtgtat tgcgaacaaa tgatgatgga aaacggctgg ggtaataatg ctcctgagct
     4321 ttggcttaca ttgtacaaat ggcggttgcg cgaatgcagc aacgttttga tcgattatgg
     4381 aattcaatgt ttgaattaca ctgaagatga cgtgaagaaa ttattgaaga acgagacttt
     4441 ccaggaagac ggacagataa aggaaaaata tcatcgtgca a
//
LOCUS       DASQJI010000071         9117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2615609,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000071 DASQJI010000000
VERSION     DASQJI010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9117
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2615609"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1216)
                     /locus_tag="VEV83_02320"
     CDS             complement(<1..1216)
                     /locus_tag="VEV83_02320"
                     /inference="COORDINATES: protein motif:HMM:NF012931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HYK43971.1"
                     /translation="MKRSFSVLVVVTLFLFSQSATAQAKDFIVKGFHLDLRIQVMKMD
                     ALKAFAKKLSEQGINTLVMEWEATYPFETHPLIPNKYAYTKDEIRSFISYCGSIGIDV
                     IPLQQSFGHVEYILRHERYKDLREDQKDYSQVCPLQAEGDKQLFTDLFTELAATHPSK
                     YFHIGGDETYLLGHCDKCKAMAAKEGTSKLYIDHIKMLCDIVISLGKIPVMWADIALK
                     HPEALQLLPKQTILVDWNYGWDMNNFGDHEKLMQSGFEVWGAPAIRSHPDNYFLTQWE
                     KHFKNIRDFMPICRQLGYKGIIMTSWSTSGQYSTVWETSDDITDLYAIRHVYPITGFN
                     MLLAAYTKSLQTQNPLDIPEFIKTFGKEQYGFKEQESFSFWKALTTCPFEISQGKVLA
                     PLDITVSQLADSQ"
     gene            complement(1355..3283)
                     /locus_tag="VEV83_02325"
     CDS             complement(1355..3283)
                     /locus_tag="VEV83_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK43972.1"
                     /translation="MKHVITVIMLVFVFETVYAQNIEKHAPAGFDSVQNIAHGKIDTI
                     SYYSTTVGTRRRSLIYTPPGYSKKKKYPVLYLLHGIGGDEKEWFINGHPEIILDNLYA
                     HEKAEPMIVVLPNGRAMKDDRAIGNIFDSAKVAAFANFEKDLIHDLIPYVEKNYPVYQ
                     DREHRAIAGLSMGGGQSLNFGLGNLDKFAWIGGFSSAPNTKTPDQLVPDPGKARQQIK
                     LLWISCGDADGLISFSKRTHDYLVEQNVPHIFYIEPGIHDFKVWKNSLYLFSQLIFKP
                     VDVSKFNQYSLVGIPASTNIRNAKYPQVLPNNRVIFRIQAPDAQKVQIDLGKKYDMQK
                     DTGGYWIVTTDSVSEGFHYYSLIIDGVSVADPGSETFYGMGRQASGIEIPFAGEDYYA
                     LKDVPHGDIRIKNYFSQVTRSWRQMYIYTPPGYDSNVNQKYPVLYILHGGGEDERGWA
                     TQGKTNLILDNLIAAGKATPMLVVMPDANIGLGGFNANAIESSLKMFEGEIKQSIIPF
                     VEKNYRALNGANDRALAGLSLGGLHTLYTGVTNTDMFAYLGVFSSGWILPMQEKFAEA
                     QYDFIKTNTDKINNNLKLFWLSQGGKDDIAYNNGQIMLGKLDELKIRHTYYEYPGGHT
                     WPVWRNDLYNFAPLLFKN"
     gene            3503..4414
                     /locus_tag="VEV83_02330"
     CDS             3503..4414
                     /locus_tag="VEV83_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK43973.1"
                     /translation="MLTLFWKYYRNKAETTPKQQLGPFATDLSVYKEIPGTGLRITWI
                     GHSSLLIEIDGKKILTDPVWAERASFSSLVGPKRFFPAPLQLNELPSLDAVIISHDHY
                     DHLDHSVIKQFANKQIPFFTSLGVGKYLEEWGIKSGLIKELDWTDKVMLGHDCELTAL
                     PARHFSGRGLHNRFETLWSSFVIKTSKHKIFYGADSGWFDGFNEIGDIYGPFDLTMIE
                     IGAYNEDWADIHMGPENAVNAHIALKGKLMMPIHWGTFNLALHAWREPIERLLKYAAE
                     KQVQLLLPKPGEPTEVTNEGWDSEWWM"
     gene            complement(4458..5288)
                     /locus_tag="VEV83_02335"
     CDS             complement(4458..5288)
                     /locus_tag="VEV83_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HYK43974.1"
                     /translation="MIVHLIDGTYELFRHFYGLRSFNKGKDKPFGATIGVLNGVLQMI
                     EEGATHLGVATDHVIESFRNELWADYKTGAGIDWALLSQFHPTEEALTSMGVVVWPMI
                     ELEADDALASAAHLAAKDARVQKVCIWTPDKDLAQCVRGDRVVQIDRRTLTIRDANEV
                     TRRFGVKPELIPDFLALVGDSADGYPGISGIGKVGAARLLNQYGKIERFPKNVLGTKR
                     QQALLFKRLATLRTDAGLFDDVEELRWRGPSPGFAAFTKKIGNPRLLERANALAAKAV
                     "
     gene            complement(5418..7562)
                     /locus_tag="VEV83_02340"
     CDS             complement(5418..7562)
                     /locus_tag="VEV83_02340"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitobiase/beta-hexosaminidase C-terminal
                     domain-containing protein"
                     /protein_id="HYK43975.1"
                     /translation="MHVVKKVCESILIGALFFLLFILAFEQKLLIPNWLQVVGRMHPM
                     FLHFPIVLLIVSFLTLWLPIQRENEWLHFLWLCAGLSAVLTSIMGLLLSLQESSDSQV
                     LIWHKWGGVAVALLGTSFYWFHSFFRKKIIVGKTFTVLATMCILLTGHWGADITHGEN
                     FILAPVEKRQTVPIDQAIAFKDVIKPILDEKCMTCHGEASKKGGLLLQDIPGILRGGK
                     TGPLFEPGKPAASLIMQRIHLPLTEKKHMPPASKEQLTEDEAMLLWAWIKSGAVIDKK
                     VTSLPVEDSFRILATHYLVPSDNYVPDQPVYDFKAADESNIKSLNNNYRVIEQLGKNS
                     PALSVRFYGKSMYSSKAMQELLPVKDQIVDLNVAHMPVKNDDLKTIQQMANLRRLNLN
                     YTDITNEGLMELSNLKDLEALSLSGTAVTAAALRKLLSLLRINELFVWNTKVDSTQAI
                     ALRNEYKNVKIETGYVDNGEVMMALSAPMIQTKSAVFDSTIQIKMKHPFRGAEIRYTL
                     DGSRPDSVNSPVYKEPIELTNTATLVARAFREGWYGSDSSRAVYLKKGVNPDSIQLLT
                     QPDPQYKAPNGNLLSDNNLADLNYNNSTGEWLGYRKTEAAYLLYFHDNVTAQNVFLNM
                     LENTGGYIFPPVTVEVWGGAEKNKLKLLGRITPQMPKKYEDAKLIQEKISFAPSQMRI
                     MKIVAKPLPRLPSWHGGKGEPAWIFLSEIVVN"
     gene            complement(7837..8862)
                     /locus_tag="VEV83_02345"
     CDS             complement(7837..8862)
                     /locus_tag="VEV83_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HYK43976.1"
                     /translation="MKRRTFIQQTSLLTCSIIITKDLFAKPKGAVYGHGDMKYRMDVK
                     WGELNAAKHPVNDCHEMIEDKKDRIVLLTNETKNNVIVYGKSGKLLQTWGHEFPGAHG
                     LTLHNENGEDFLYITDITLHQVYKTTIDGSLLMTIDYPAETGAYKKKEEFVPTETTVL
                     DNGDFYIADGYGAQYIMQYDAKGKLKNLFGGRGDGNEHLDNAHGITIDTRQSPATLLI
                     TDRTRNCFKRFSMDGKLLEVISLPGACVCRPVIHGDHLYAAVLRSPDMNAEKSGFVTI
                     LDKNNKVVSNIGGTEPVYKDGQLQPMAQAEKIFIHPHDVCVDDDENLYVAQWASGKVY
                     PYKFTRV"
BASE COUNT         2462 a         2012 c         1863 g         2780 t
ORIGIN      
        1 cctggctgtc tgccaattgt gatacagtaa tgtccagtgg agcaagcact ttcccctggc
       61 ttatttcaaa aggacatgtt gtcaacgctt tccaaaacga gaatgactcc tgctccttga
      121 agccgtactg ttcttttcca aacgttttaa taaactccgg aatatccaac gggttttgcg
      181 tttgcaaact tttagtatat gctgcgagca acatgttgaa accggtgatc ggatatacat
      241 gtcttattgc gtacaggtct gttatatcat cggaggtttc ccaaacagtg gagtattggc
      301 ccgatgttga ccatgacgtc atgataattc ctttatagcc taattgcctg cagatcggca
      361 taaaatcgcg tatgttttta aaatgctttt cccattgcgt tagaaaataa ttgtcgggat
      421 ggctgcgtat tgcaggcgcg ccccacactt caaagccgga ctgcataagc ttttcatgat
      481 ctccaaaatt attcatatcc caaccgtaat tccagtcaac aagaatggtt tgctttggta
      541 aaagttgcaa agcttccgga tgttttagcg cgatgtctgc ccacatcacc gggatcttgc
      601 cgaggctaat cacgatatca caaagcattt taatgtggtc tatatacaat tttgatgtgc
      661 cttctttggc agccatggct ttgcatttgt cacaatggcc aagcagatag gtttcatcac
      721 cgccgatgtg aaaatatttt gaaggatgtg tcgctgccag ttctgtaaac agatctgtaa
      781 ataattgttt atccccttct gcctgtaacg ggcaaacctg tgaatagtct ttttgatctt
      841 cccgcagatc tttataccgc tcatgccgta aaatatattc tacgtgtcca aagctttgtt
      901 gcaatgggat aacgtcaatc ccaatgctac cgcaataact tataaaggat cttatttcgt
      961 ctttggtata agcgtattta ttggggatga gcggatgtgt ctcgaatgga taagtagctt
     1021 cccattccat caccagtgtg tttattccct gttcgcttag tttttttgca aaagctttta
     1081 gtgcatccat cttcattacc tgtatcctca ggtcaagatg aaaacctttt acgataaaat
     1141 cttttgcctg tgcggttgca gactgagaga acaaaaacaa cgtgacaaca actaatacgc
     1201 tgaaggatct tttcataaga ttgtagttat ccctggaaag actaagataa ggtgtaatta
     1261 ttatcggaag tgaaaaaggc taacgtccaa agttgactgt acctaaaact tattactttt
     1321 ttgtcgcaga taaatcttca ctggtgttgt tgaattaatt tttaaataac aggggcgcga
     1381 aattatacaa atcatttctc cataccggcc atgtgtggcc acccggatat tcatagtaag
     1441 tgtgcctgat ctttaattca tccaactttc ccaacatgat ttgcccattg ttgtaagcaa
     1501 tgtcgtcttt accgccttgt gaaagccaga agagtttcaa attgttgttg atcttatctg
     1561 tatttgtttt tataaaatca tattgtgcct ctgcaaattt ttcctgcata ggtaagatcc
     1621 aacctgaact aaacacgccc aggtaagcga acatatctgt gttagtaact cctgtgtata
     1681 atgtatgcaa cccgcccaat gataagcctg ccaatgcgcg atcatttgca ccgtttaatg
     1741 cacggtaatt tttttcaaca aaggggataa tggattgctt tatttcaccc tcgaacattt
     1801 ttaatgaaga ttcaattgca tttgcattaa agccacccag gccaatgttt gcatctggca
     1861 ttacaacaag cattggcgtt gctttgcctg ctgcaataag attatcaaga attaaatttg
     1921 ttttgccttg tgttgcccac cctctttcgt cttcgccacc gccatgcaag atgtatagca
     1981 caggatattt ttgattgacg tttgaatcgt aaccaggtgg cgtatagata tacatttgac
     2041 gccaggaacg tgttacctgt gaaaaataat ttttaattcg tatatcacca tgcggcacat
     2101 ctttcaatgc ataataatct tcacctgcaa aaggaatttc aataccgctt gcttgtctgc
     2161 ccataccata aaacgtttca cttccgggat ctgcaacgga aacaccatca ataattaagg
     2221 aataatagtg aaagccttcg cttacagaat cagtagtgac gatccaatag ccgccggtat
     2281 ctttttgcat atcatatttc tttcccagat caatttgtac tttttgtgca tcaggtgctt
     2341 gaatgcgaaa gatgacacgg ttgttgggaa gtacctgcgg atattttgca ttgcggatat
     2401 tagttgaagc gggtataccc actaaactgt attgattaaa ttttgaaaca tcaacaggtt
     2461 tgaaaatgag ctgcgagaac aaatacaaac tgttcttcca aaccttgaag tcatgaatgc
     2521 ctggttcaat ataaaatata tgcggcacgt tttgttcaac aagataatcg tgtgtgcgtt
     2581 tgctgaagct tattaagcca tcagcatcac cgcaggaaat ccacagcagc tttatttgtt
     2641 gtcttgcctt cccgggatca ggcactaatt ggtcaggtgt tttcgtattt ggtgcagaag
     2701 agaagccgcc gatccatgcg aacttgtcaa ggttgcccaa accaaaattt aatgattgcc
     2761 cgccgcccat cgacaatccg gcaatcgcac ggtgttctct atcctggtaa acaggataat
     2821 ttttctcaac gtaaggaatt aaatcatgta ttaaatcttt ttcaaagttt gcaaaggctg
     2881 caactttagc gctgtcgaaa atattaccga tggcgcgatc atctttcata gctcgtccgt
     2941 ttggcaacac aacaatcata ggttctgctt tttcgtgcgc atataaattg tctaaaataa
     3001 tttcaggatg gccattgata aaccattcct tttcatcgcc gccgatgcca tgcaataaat
     3061 acagcactgg atattttttc ttttttgaat agccgggcgg cgtgtaaatc aaacttcttc
     3121 gccttgtgcc aacggttgtc gagtaataac taatcgtatc aattttacca tgcgcaatat
     3181 tctgaactga atcaaaacca gctggagcat gcttttcaat attctgcgcg taaactgttt
     3241 caaaaacaaa caccagcatt ataactgtaa tgacgtgctt catcttgttt gtaaattttt
     3301 cttgttcagt gctgaatttg tactgaaaag ttatttaaac gaaaatagtt tttcaaaaaa
     3361 tcttactatg catataaatt aatatttttc ctgtttttac ctggctacct aaaatgtaac
     3421 aatgcaatat ctgcatcgtg ctcaaaaaaa cgggaagaag tttttaaacc ctgtcccgac
     3481 cgaaatatct accggctcaa atatgctaac gcttttttgg aaatattacc gaaacaaagc
     3541 tgagacaaca ccgaaacaac agttaggccc ttttgctaca gacttatcgg tctacaaaga
     3601 aatacctggg actggattgc gaattacatg gatcgggcat tccagcttgt taattgagat
     3661 tgacggaaaa aaaattctga cagatcctgt ttgggctgaa cgggcatctt tttcttcctt
     3721 ggttgggcct aaaagatttt ttccggcgcc tctacaattg aatgagctgc cctcattaga
     3781 tgcggtaata atttctcatg atcattatga tcacttagat cactccgtga taaagcaatt
     3841 tgcaaacaag caaatccctt ttttcacctc gttaggcgtg gggaagtatc ttgaagaatg
     3901 gggaatcaaa tccggtttaa taaaagaatt agactggaca gacaaagtga tgctcggtca
     3961 tgattgcgaa ttgacagcct tacctgcgag acatttctcg ggcagaggtc ttcacaatcg
     4021 ttttgaaaca ctttggtctt cctttgtgat caaaacgagt aaacacaaga tattttatgg
     4081 tgcagactct ggctggttcg acggtttcaa cgaaatcgga gatatatatg gaccttttga
     4141 tcttacaatg attgagatag gtgcttacaa cgaagattgg gctgatatac atatgggtcc
     4201 cgagaatgca gtgaatgcac acattgccct aaaaggaaaa ctgatgatgc cgatacattg
     4261 gggaacattt aacctcgcgt tgcatgcatg gagagaacca attgaacgat tactaaagta
     4321 tgctgcagaa aaacaggttc aattgttatt accgaagccg ggcgaaccga cagaagtgac
     4381 gaatgaaggt tgggattcag aatggtggat gtaagcaatg agtactagca attcttttct
     4441 acatttcgca aaccttctca cacagctttc gcagccaaag catttgcgcg ctcaagtaac
     4501 cggggatttc cgatcttctt tgtaaacgcc gcaaaccccg gcgatggacc tcgccatcgc
     4561 agttcttcca cgtcatcaaa taaccccgca tccgttcgca atgttgcgag gcgtttgaaa
     4621 agaagggctt gttgccgttt tgtgccgagt acattttttg gaaatcgttc aatttttcca
     4681 tactgattga gcagccttgc tgcgccgacc ttgccgatgc cggaaatgcc ggggtagcca
     4741 tctgcgctgt cgccaacgag tgcaagaaaa tcaggaatga gttccggctt cacgccaaac
     4801 cttcttgtga cctcatttgc atcacggatc gtcaaagttc tccgatcgat ctggacaaca
     4861 cgatcgcccc gaacgcattg tgccaggtct ttgtccggcg tccaaatgca tactttctga
     4921 acgcgggcat ctttcgccgc aaggtgtgct gccgaagcta atgcatcatc agcttcgagc
     4981 tctatcatcg gccaaacaac aacacccata gaagttaatg cttcctccgt cggatgaaat
     5041 tgagacaaaa gcgcccagtc gattccggcg cccgttttgt aatcggccca cagctcgttg
     5101 cgaaatgatt cgatcacatg atctgtcgct accccgagat gagtggctcc ttcttcgatc
     5161 atttgcagta cgccgttgag aacaccgatg gttgctccaa acggtttgtc ctttcctttg
     5221 ttgaaactac gcaggccata aaaatgacga aacagttcat aagtgccgtc gatgagatgg
     5281 acgatcattg catttccaaa atgatgaaca atttaattca ctcagggttc gatcccaatg
     5341 caatgtatgt tttgataatt taggagagtg aagaaatttc gcattttcaa atgatagcac
     5401 gaccgatttt cagtcgatta attcaccacg atctcactta aaaatatcca tgcgggttct
     5461 ccttttccgc catgccacga aggaagtcgt ggcagtggtt ttgcaacgat cttcataatc
     5521 cgcatttgcg aaggcgcaaa tgaaattttt tcctgaataa gttttgcgtc ttcatatttc
     5581 tttggcattt gtggagtaat ccttccaagc aacttcaatt tatttttttc cgctcctccc
     5641 cacacttcaa cagttaccgg cggaaaaata taacctcccg tattttcgag catgtttaga
     5701 aaaacatttt gggccgtgac attatcatgg aaatataaca ggtaagcggc ctccgttttt
     5761 ctgtagccaa gccactcgcc tgtactgttg ttgtaattca ggtctgcgag attattatcc
     5821 gacaataaat ttccattcgg tgccttgtat tgcgggtcgg gttgtgtaag caattggatc
     5881 gaatcgggat taacaccttt ctttaagtaa actgcccggc tggaatcgct tccataccag
     5941 ccttccctga atgctcgtgc tacgagtgtt gcggtattag taagttctat tggttctttg
     6001 taaacagggc tattgacact gtccggccgg gatccatcca atgtgtatct tatctctgcg
     6061 ccccggaacg gatgtttcat tttgatctga atggtgctgt caaacaccgc tgatttcgtt
     6121 tggatcatgg gtgcactgag cgccatcatc acttcaccat tatcaacata gcctgtttct
     6181 atctttacgt ttttatattc atttcgcaaa gcgatggctt gtgtgctgtc gacttttgtg
     6241 ttccaaacga aaagctcgtt gatgcgtaat aaagacagta attttcgcaa agctgcagcc
     6301 gttaccgctg ttcctgagag cgataatgct tcaaggtctt tcaaattgct tagctccatc
     6361 aaaccctcgt tggttatatc agtgtaattg aggttgagtc ttcgcagatt tgccatttgc
     6421 tggatcgttt tcaaatcgtc attttttaca ggcatgtgcg cgacattcaa gtcgacgatc
     6481 tggtctttca ccggcaataa ttcctgcatt gctttcgaag agtacatgct ttttccgtaa
     6541 aaccgtacgg agagagcggg agaatttttt ccgagctgtt caataacacg gtagttattg
     6601 ttgagtgatt tgatgttgga ttcatcggct gctttaaaat catacactgg ctggtcgggc
     6661 acgtaattat cggaggggac tagataatgt gttgccagaa tgcgaaatga atcttcaact
     6721 ggtaagctcg ttactttttt atcgatcact gctcctgatt ttatccatgc ccacaatagc
     6781 attgcctcat cttctgtcaa ttgttctttt gaggcgggcg gcatgtgctt cttctctgtt
     6841 aatggcaaat gaattctttg cattatgaga ctcgccgcag gtttcccagg ctcgaacaac
     6901 ggacccgttt ttccccctcg taaaatacct ggaatatcct gaagcagtaa cccgcctttc
     6961 ttacttgctt caccgtgaca ggtcatgcac ttttcatcaa gaattggttt tatcacatct
     7021 ttaaatgcga tcgcctggtc gatggggacc gtttgtcttt tttctacggg ggcgaggatg
     7081 aaattttcac cgtgtgtaat atcggcgccc caatgcccgg taagaagaat gcacattgtt
     7141 gcaagaaccg taaatgtttt gccgacaatt atttttttgc gaaaaaagga atgaaaccaa
     7201 taaaatgatg tgcccaataa agcaaccgct acgccgcccc atttatgcca aatcaaaact
     7261 tggctgtcgc tgctttcctg cagggataac aataaaccca tgatacttgt gagaaccgca
     7321 gacaggcccg cacagagcca aaggaaatgt aaccattcat tctctctttg gatcggcaac
     7381 cataacgtaa ggaaagaaac aataagcaac acgatcggga aatgcaaaaa catcgggtgc
     7441 attcttccaa ctacctgcag ccaatttggg atcagtagtt tttgctcaaa tgcaagaatg
     7501 aaaagcagga aaaataacgc accaattaaa atgctttcac aaaccttttt aactacatgc
     7561 atatattgtc agaagccctt tgttgggtca aataatattg tactctgtag tgaatcgtta
     7621 ttccccttga acttaatttt caagcagagt atttttaaac caccagattg catgtactaa
     7681 agttagcaga ttcccgcctt cgccggaaag acgtgcggtc ccgttcatga aacttgggca
     7741 ctattttacc gcaaggatcg cgatcattcg agtaaacttt aatagcacga caccttaagt
     7801 tccaatttgc gattcacgtc gcacatctta ctataattac actctcgtaa atttataagg
     7861 atacactttc cctgatgccc attgcgccac atacagattt tcgtcgtcat ccacgcatac
     7921 atcgtgcgga tggataaata ttttttctgc ttgtgccatt ggttgcagtt gcccgtcttt
     7981 ataaaccggt tccgtgccgc caatgtttga tactacttta ttattcttat cgagtatggt
     8041 gacaaaaccg ctcttttctg cattcatatc aggcgagcgc agcaccgcag catacaagtg
     8101 atcgccatga ataacggggc ggcaaacgca agcgccgggt aatgaaatca cctcaagtaa
     8161 tttgccatcc attgaaaaac gcttgaaaca attacgcgtg cggtcggtaa ttaataatgt
     8221 tgctggagat tgtcttgtgt caatggtgat tccatgtgca ttatccaggt gttcattacc
     8281 gtctcctctt ccgccaaata aatttttgag tttgcctttt gcatcatact gcataatgta
     8341 ttgtgcgccg taaccatcgg caatgtaaaa atctccgttg tcaagcacgg ttgtttcagt
     8401 cggcacaaat tcttctttct ttttataggc tcctgtttcc gcgggataat cgatcgtcat
     8461 caaaagactg ccgtcaattg tggttttgta cacctggtgt agtgtgatat cagtaatgta
     8521 taaaaaatct tcaccgttct cgttatgaag tgttaagcca tgggcgcccg gaaattcatg
     8581 tccccatgtt tgcaataact ttcccgattt gccataaaca atcacattgt tcttcgtttc
     8641 attcgtgagc aagacgatcc ggtctttttt atcctctatc atttcatggc aatcattcac
     8701 cgggtgtttt gcggcgttca attcgcccca ctttacatcc attcgatact tcatatcgcc
     8761 atggccatag acagcgcctt tcggttttgc aaagagatct tttgttatga tgatactaca
     8821 tgtaagcagg ctggtctgtt gtatgaatgt tcttcgtttc attttgagtt aatttgtttc
     8881 taaggttatt cataagctgc gagtttcgag cggcgagcta cgagcagacc tcgaagcagc
     8941 agctacttgc tcaagttttt gttgcagtac aagagtgcga cgcaacgaaa gtttaatagt
     9001 agcaatgtag ccgggctcat aaaaattatc aagctgcgag cctcgagcgg cgagctacga
     9061 gcaggctcga agctcgtggc tcatagctcg cggctcctac gttaaaatat ctctcac
//
LOCUS       DASQJI010000072         5501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1540569,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000072 DASQJI010000000
VERSION     DASQJI010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5501
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540569"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1537
                     /locus_tag="VEV83_02350"
     CDS             281..1537
                     /locus_tag="VEV83_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HYK43977.1"
                     /translation="MDSVNLLLGIGITLLLIAFFAGLEIAFISSNRLSIELKKKQGHV
                     SGIILSRFMENPSRFLGACLVGVNIFFVIYGILFSELLRMDLWNPLHLENEYIRLLCD
                     TALSSFVVLVIGEFLPKAIFKAKNDSLLSFFAPVAQVFYRLFNPISSLFVNLADGILK
                     YLFNVRIKDKEHFSKVDLEHFYQQTKEQAPDSQELNTELFENALSLPSVKVRQCLVPR
                     TEIEALELDDSVETALQQFIDTKLSKLVVYEGNIDNIQGYIHQLDLFKKPSDLRSILL
                     PIPVVPETMSATDLMNKFTKERKSIAWVVDEFGGTAGIVTMEDLLEEIFGEIRDEYDT
                     EEFVEKQIAENEYIFSGRLELDYLNEKYDLDFPKSESETLSGYIINQYETIPQLKERI
                     FVDNYEFDVLNVSETRIEMVKLKVLR"
     gene            1617..2474
                     /gene="tatC"
                     /locus_tag="VEV83_02355"
     CDS             1617..2474
                     /gene="tatC"
                     /locus_tag="VEV83_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HYK43978.1"
                     /translation="MTEGFFGRRNQGKGEMAFVDHLEELRWHIIRSLLAILFFAVIIF
                     IKIQWVFDNIIAGPINPNFISYRGICNFSHAIGLGDNLCLPPVSINMQTTTFGGQFFA
                     SFSIAFIGGLIAAFPYIFWELWRFVKPALKPRELKGTRFVIFWVSFFFLLGGAFGYFI
                     LGPFTFNFLATFQVSGLNMIQTKPTINDYIDNLTNLILGCGIAFEMPVLAYVLTKIGI
                     ITPNFLKRTRKYAIVVILVLAAIITPSPDWYSQTIVFLPLFSLYELGVYVSGRVYKRE
                     QKKEMEEWS"
     gene            2518..3993
                     /locus_tag="VEV83_02360"
     CDS             2518..3993
                     /locus_tag="VEV83_02360"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYK43979.1"
                     /translation="MKKIFLFFSIILSLNLTAQNKAAEKFAATITPADLKEKLSVIAG
                     AEMEGRETATEGQRKAATYIEDYFKKLKLSPGDSGKYQMPFPVYQDSLLSATVTVNNT
                     EFAFGDDFAPAGSGIPSGSWKTPLVVFAGDGVKDSTHNDYDSLDLKGKWVMIAPHNLN
                     ENSDFAILRKTLLASGYKADGLLIVSDTFPRAAARRKGMMYNAPGNKNAFPALFISKK
                     LARQILGADTITDFHSLARKGYETEFEFTAAKTQNNLQSTDVIGVLPGTDKKSEYVFI
                     TAHYDHLGKRDSVIYYGADDDGSGTSSVLEIAEAFAAARDKGIKPRRTIVFMTVSGEE
                     KGLWGSAYYTDHPVFPLDSTSIDLNVDMVGRIDPTRTYGDSLNYVYTIGEHKISTDLK
                     RISDSINKMYSHLELDRKFNDPKDPNRFYYRSDHFNFAKKGVPIIFYFNGTHADYHRP
                     TDTVDKINFELMAKRVKLVFYTAWEMANRNEMVKRDKPLNE"
     gene            complement(4141..4863)
                     /locus_tag="VEV83_02365"
     CDS             complement(4141..4863)
                     /locus_tag="VEV83_02365"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK43980.1"
                     /translation="MKLFYSGAFITLSAFTSCFNPFHETIHGDGHITTTERNIQSVHA
                     VRCSGSYDVQLTQGSPTSVKIETDQNLQSYIVTDVSGDALTIRSKEDVNLDPSGKIKV
                     YITTDRLEEFKLSGSGNITTQNKFTGGSHLDLDISGSGDMHFDVNTPEIDCNISGSGN
                     MYLSGETKEAKIEIAGSGNYHAEDLKSENSTVKIAGTGNAWLFAENTLDINIAGMGDV
                     SYKGNASVTQNIAGTGKIKKME"
     gene            complement(5177..>5501)
                     /locus_tag="VEV83_02370"
     CDS             complement(5177..>5501)
                     /locus_tag="VEV83_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HYK43981.1"
                     /translation="RETFDFLHSLDISYLHVFTYSERDDTKALGIKPVVPMRIRHERN
                     KILRNLSYQKMQYFISQHRGEKRKVLFEDHNKTGMMEGYSDNYIRITTPYRQEWANQV
                     VEFMI"
BASE COUNT         1534 a         1177 c         1216 g         1574 t
ORIGIN      
        1 gttcatgatc aaaaaagatt tgtggacggc aaaagagttg atccgtcaaa accatatgac
       61 ccaaacgcac ctccgtttga gcctgacaaa gacaaatgat ccattgtttt ccgcgagttc
      121 gaatcttaag aaattatgca tgaagagttg attcgccggt tggctgtttt tgacagaaag
      181 cgtaaaacag cagtaaaaat taatgtcatc gttgtcgtgc gtgatgtgct atgttgatcg
      241 gcgtagtatc aaattatcca acttttcata cattcgattt atggattcgg ttaacctgct
      301 gttaggaatt ggaattactt tactgctgat cgcctttttt gccgggcttg aaatcgcttt
      361 catcagctcg aaccggctaa gtatcgaact caaaaaaaaa cagggacatg taagtggaat
      421 tattctttca cgcttcatgg agaatccttc gaggtttttg ggcgcgtgcc tcgttggcgt
      481 aaatattttc ttcgttatct acggcattct tttcagtgag cttttgcgaa tggatctttg
      541 gaatccgctc cacctggaaa atgaatacat caggctacta tgtgatacgg cgctttcgtc
      601 tttcgtggtg ttggtgatcg gtgaatttct tccaaaagca attttcaaag ccaaaaatga
      661 tagcctgctg agcttctttg caccagtggc acaagtattt tacaggctgt tcaatcctat
      721 ttcatcattg tttgtgaatt tggctgacgg tattttgaaa tacctgttca atgttcgcat
      781 aaaagacaaa gagcattttt cgaaagttga cctggaacat ttttaccagc agacaaaaga
      841 acaggctcct gattctcagg aattaaatac cgagttgttc gaaaatgctt tgtcgttacc
      901 gtccgtgaaa gttagacaat gcctcgttcc gcgtacagag atcgaagcgt tagagctgga
      961 tgattctgtt gaaacggcgc tgcaacaatt catagataca aaactcagta aactggttgt
     1021 atatgaaggg aacatcgaca atatccaggg ttatattcac cagcttgatc ttttcaaaaa
     1081 accttcagac ctgcgctcga tcctgttgcc aattcccgtt gtccccgaaa ccatgagcgc
     1141 aactgatctt atgaacaagt tcacaaaaga aagaaaaagc atcgcatggg tcgttgacga
     1201 attcggcggc acagcaggta tcgttacgat ggaagatctg ctggaagaaa tttttggtga
     1261 gatcagggac gagtatgata cagaagaatt cgttgaaaag cagatcgcgg aaaatgaata
     1321 tattttttct ggccggcttg aactcgacta cctaaacgaa aaatatgacc ttgactttcc
     1381 taagagcgag tcggaaactt tatcgggcta cattatcaac cagtatgaaa ccattcctca
     1441 gcttaaagaa cgcatcttcg tcgacaatta tgaatttgat gtcctcaacg taagcgaaac
     1501 gcgtatcgaa atggtcaagc tgaaagtatt gcgttaaaaa tttccgtttc aaatttttaa
     1561 atgacggcgg ttatttgccg ccgcgtacat ttgtaccctt taacaaaaat gaaagaatga
     1621 cggagggctt tttcgggcgg cgcaaccagg gcaaggggga aatggctttt gtggatcatc
     1681 tcgaagaatt aagatggcat atcattcgtt ccttactcgc gatcttattt tttgcagtca
     1741 ttatttttat aaagatccaa tgggtattcg ataacatcat cgccgggcct atcaatccta
     1801 attttatcag ctatcgtggc atttgcaatt ttagtcatgc cattggtctt ggcgataatc
     1861 tctgcctgcc accagtcagc atcaacatgc aaaccaccac attcggcgga cagttcttcg
     1921 caagtttttc catcgcattt attggcgggt tgatagccgc ctttccatac attttttggg
     1981 aactgtggcg attcgtgaaa ccggcgctga agccacgcga gttgaaggga acacgcttcg
     2041 taatattttg ggtgtcattc tttttcctgt tgggaggagc gttcggctat tttattcttg
     2101 gcccttttac attcaacttt cttgcaacgt tccaggttag cggtttgaat atgatccaaa
     2161 cgaaaccaac cattaatgat tacatagaca atctcacaaa tctaatttta ggctgcggca
     2221 tcgcattcga gatgcctgtg cttgcttatg tgctcaccaa gatcggcatc atcaccccaa
     2281 attttttgaa gcgcacacgc aaatacgcga ttgttgttat tcttgtgctt gctgctatta
     2341 ttacacccag cccagattgg tacagccaga cgatcgtctt tcttccgcta ttttctttgt
     2401 acgaacttgg cgtgtatgtt tcaggcaggg tgtataaacg tgagcagaaa aaagagatgg
     2461 aagaatggag ttgatgcgaa gggtaaaatc ataaagagat acgaacatcc gatattcatg
     2521 aaaaagatct ttctcttttt ttcaatcatc cttagcctca atctcaccgc tcaaaataaa
     2581 gcggcagaaa aatttgcagc cacgatcacg ccggctgatc tcaaagaaaa gctaagcgtg
     2641 atcgccggtg cggaaatgga aggacgtgaa actgcaacag aaggccagcg gaaggcggct
     2701 acatacattg aagactattt caaaaaactg aagctctcac caggtgattc gggcaagtat
     2761 caaatgccgt ttcccgttta ccaggattca cttctctccg ccacggtgac tgtaaacaac
     2821 accgaatttg cattcggtga cgatttcgcg ccggcgggat ccggcattcc ttccggatcg
     2881 tggaagacgc cgctagtggt ttttgccggt gatggcgtta aggattcaac ccacaatgat
     2941 tacgatagcc ttgatctgaa aggcaagtgg gtgatgatcg ctcctcacaa cctcaacgaa
     3001 aactcagact tcgccatcct gagaaagacg cttttggcgt cgggttataa agcggatgga
     3061 ttgcttatcg tttcggatac ttttccacgt gcggccgcga gaagaaaagg catgatgtat
     3121 aatgcgcctg gaaataaaaa tgctttccct gcattgttta tctcaaaaaa acttgcacga
     3181 caaattttag gtgctgatac gatcaccgac ttccacagtc ttgcgcgaaa aggatatgag
     3241 accgagtttg aattcacagc tgctaaaaca caaaacaact tacaaagcac agatgtgatc
     3301 ggtgtgctgc ccggtaccga taaaaaaagc gaatacgttt ttattaccgc tcactatgat
     3361 cacctgggca aacgggattc cgtgatctat tatggcgctg acgacgacgg cagcggcact
     3421 agcagcgttc ttgagatcgc agaagcattt gcagctgcaa gagataaagg aattaaacca
     3481 cgacgtacga tcgtatttat gaccgtttcc ggagaagaaa aaggtttgtg gggaagcgcc
     3541 tactataccg atcacccggt tttcccgctt gattcaacat ccatcgatct taatgtcgac
     3601 atggtcggtc gtatagatcc aacacgcaca tacggcgatt cgttgaacta cgtttacacc
     3661 atcggtgaac ataaaataag taccgatctg aagcgcattt cagacagtat aaataaaatg
     3721 tattcacatc ttgaactgga cagaaagttt aacgatccaa aagaccccaa ccgtttttac
     3781 taccgtagcg accatttcaa ctttgcaaaa aaaggagtgc ccattatttt ttatttcaat
     3841 ggcacgcatg cagactatca tcggccaacc gataccgttg acaagatcaa ttttgaactg
     3901 atggcgaaaa gggtgaaatt ggttttttac accgcctggg aaatggcgaa cagaaatgag
     3961 atggtcaaga gagacaagcc gttgaatgag tgacgcgttt gaattgtgaa tggtcaatgg
     4021 tgaatgggct gttgaaaatc gaaacttaaa ataccaaatt gaagccgtca aatcgttaag
     4081 agtagattaa attgtaactt ggccaatctg caatctgcaa tctacaatct gcaatctccc
     4141 tcactccatc ttcttgatct tccccgttcc cgcgatattt tgcgttacgg aagcgtttcc
     4201 tttgtagctt acgtcaccca taccggcaat gttgatgtcg agcgtatttt ccgcgaatag
     4261 ccacgcattt ccggtgcctg cgatttttac tgttgaattt tcgcttttca gatcttctgc
     4321 gtggtagttg cccgaacccg cgatctcgat cttagcctct tttgtttctc cagaaagata
     4381 catgttgcca ctgccggaaa tattgcagtc gatctctggt gtgttcacat caaagtgcat
     4441 gtctccgctg ccggaaatat caaggtcgag atgactgccg ccggtaaatt tattttgcgt
     4501 cgttatatta ccactgccgc ttaatttgaa ttcttccagc ctgtctgttg tgatatagac
     4561 cttgatcttc ccggagggat cgaggttcac gtcttccttg ctgcggatgg taagcgcatc
     4621 gccactaaca tccgttacaa tatatgactg cagattttga tcagtttcga tcttcacgga
     4681 agtcggtgat ccctgcgtaa gctgcacatc gtaactgccg gagcatctca ctgcgtgcac
     4741 cgactgaata ttgcgttcgg ttgtcgtaat gtggccgtca ccatgaatgg tttcgtgaaa
     4801 tggattaaag caggaagtga acgcggacag cgtgataaaa gctcctgagt agaacagttt
     4861 cattgaggta atttttaaag acttgaagat acgaaatgtg aatggtgaaa ttgtgaatgg
     4921 tgaattgtca attgtgaatg gctcttgaac tttgacctgc aatactgatt agtggttatc
     4981 aattacgaag agtgatcaaa ccggatcatt aactacattt tgttggtcag cgaccaacaa
     5041 aggcagtgac ttaagtacga cttgtgaatt ggcaattgtg aatggctctt gactgcgaag
     5101 tagaatacta aatccaactc ttactcatgc aaatatcaaa tcgcggtggc aaatcctaaa
     5161 tcctaattcc caaatcctaa atcataaact ccaccacctg attcgcccat tcttgccggt
     5221 acggcgtagt gatacgaatg tagttatccg agtatccttc catcatgccg gtcttgttat
     5281 gatcttcaaa taagactttt cttttttctc cgcggtgctg ggagatgaaa tattgcatct
     5341 tttgatacga aagattgcga aggatcttat tgcgttcatg acgaatgcgc attggaacga
     5401 caggtttgat gccgagtgct tttgtatcgt ctctttctga atatgtgaat acatgcaggt
     5461 aagaaatatc caggctgtgt aagaaatcaa atgtttcccg g
//
LOCUS       DASQJI010000073         5840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1848117,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000073 DASQJI010000000
VERSION     DASQJI010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5840
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1848117"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VEV83_02375"
     CDS             complement(<1..753)
                     /locus_tag="VEV83_02375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43982.1"
                     /translation="MMRIFAISLVIISCLGCKNQADELSGDKPVKPENFLKAFPFLKT
                     PLVISDTGLIHFGDTTNISYSVFSQFIPDSVLAAQLGAQSQKAIIHPVGAIRNDDNDY
                     LLAKFTLAKKNKLVVFVLSTDHKFVTSLALLTGHEPGDPYNRSVSVTVEPTFIVRQEK
                     AGKDNQLLYTRHGFAFNSASKNFDEVMNESNEQQTNDVINPIDTVPATNKFSGEYVRD
                     GKNFISVRDGKNAVTYAFFLHFEKNNGECTGEL"
     gene            834..1499
                     /locus_tag="VEV83_02380"
     CDS             834..1499
                     /locus_tag="VEV83_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HYK43983.1"
                     /translation="MLSNFTIAEENYIKSIYHLQRADDTVSTNALAERLKTKPASITD
                     MLKKLQAKGLVNYNRYKGFRLSRDGNKAALAIIRRHRLWEYFLVDQLQFSWEDVHEVA
                     EQLEHVSNRKLVDKLDAFLGYPKFDPHGDPIPDSNGRINLQDQIPLFTLPLHTAAVIT
                     SVKSESSDLLSFLSSRKITIGTKVEVKRRLDFDNSLEVKVRSRQPIHISEQVANAIQV
                     NPL"
     gene            1512..3389
                     /locus_tag="VEV83_02385"
     CDS             1512..3389
                     /locus_tag="VEV83_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HYK43984.1"
                     /translation="MMNYGVQNSLSDVHETVDVTQQRKGWKRFLPYLGPAYLVSVGYM
                     DPGNWATDLQGGAKFGYTLIWVLLMSNLMALLLQSLSARLGIVRRKDLAQANREVYPP
                     LTNFCLYVLAEFAIAACDLAEVLGMALGIELLTGLPLVYGVLITVLDTFLLFYLQKKG
                     IRAMEAFIISLVLIIGCSFLVEIFLAKPEAGELIRGFIPTPLSNEALYIAVGIIGATV
                     MPHNLYLHSALVQTRKIRNNQHGIKKALKYNFIDSTIALNAAFFVNAGILILAASVFY
                     FHGQSSVAKIEDAHRLLQPMLGTKLAPILFAVALIASGQSSTITGTLAGQVVMEGYLH
                     LRINPWLRRLLTRLLAMIPAVVVISIYGEQKVDDLLVLSQVLLSLQLGFAIIPLIHFV
                     SDKVSMGQFAIKLPTKIVAWCVAGFLVFLNVRLVVNEMLGVFAQDGQIFLKVLISIAA
                     ILFAWLFVMMTIYPFYSRRKTQRSESIHGEIPQLHQLSVQPFKRVAVALDFNRMDEKL
                     IAHAIKQGELEASYLLVHIVETVSASFSGTATDDIETIKDKERLEALASQMKQMGYNV
                     DTEIGYQSRVSEIVRIVKKYGADILVMGAHRHTGLKDVLYGATVNQVRHKLTIPVLIV
                     N"
     gene            3389..3871
                     /locus_tag="VEV83_02390"
     CDS             3389..3871
                     /locus_tag="VEV83_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK43985.1"
                     /translation="MAAIIRNIEPGDNESLAFIVRHVLKEFNADKPGTAYFESSTDNI
                     HGVFEKPRSKYFVAELDGKVVGGGGIYATDGLPEGYCELVKLYLLKEARGTGLGRSLL
                     EKCFAWAKGKGYTHVYLESMTELMDAVGLYIKLGFKYIDHPLGNCGHAVCGIWMTREL
                     "
     gene            complement(3890..4573)
                     /locus_tag="VEV83_02395"
     CDS             complement(3890..4573)
                     /locus_tag="VEV83_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HYK43986.1"
                     /translation="MSSIFLLSLLFMGISFLVSATLKNKFLQYSQMPLSQALTGKEVA
                     EKMLRENGIYDVKVTSSDGYLTDHYNPLTKTVNLSADVYNGKSIASTAVAAHECGHAV
                     QHATAYRWLMLRSRLVPFVQFSSNIVQWILLAGIIMIKAFPALLLIGIGLFALTTLFA
                     FITLPVEYDASNRALAWLERTDVTLPQEHAKAKDALNWAALTYVVAAIASLAILLQYI
                     MIYSNGRRR"
     gene            4960..>5840
                     /locus_tag="VEV83_02400"
     CDS             4960..>5840
                     /locus_tag="VEV83_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HYK43987.1"
                     /translation="MSKVKTAFFCSSCGYESAKWLGKCPACNTWNTFIEEVIERNQRE
                     KNLWKEMSGERQTTKAKLLDEVENITEQRVITTDHELNRVLGGGIVEGSLILIAGEPG
                     IGKSTLLLQDALLLQNIIVLYISGEESEKQIKMRANRLNIQNENFYILTETSLSVIFS
                     EIKKLDPSLVIVDSIQTLQSDNVDAAPGSITQVRECAASLQRFAKETQTPVFLIGHIT
                     KDGMIAGPKILEHMVDTVLQFEGDQHYAYRILRTVKNRFGSTAELGIYEMMGNGMRMV
                     SNPSEILIPQKDEVLSG"
BASE COUNT         1646 a         1252 c         1358 g         1584 t
ORIGIN      
        1 caactcaccc gtacattcgc cgttgttttt ttcaaagtgc agaaaaaaag cataggtcac
       61 cgcattcttt ccatctctca cagaaataaa gttcttgccg tcccgaacat actccccgct
      121 aaacttattg gtcgccggaa cggtatcaat cgggtttatt acatcattag tttgctgttc
      181 gttcgactca ttcattacct catcaaaatt ttttgacgca ctgttaaatg caaacccatg
      241 ccgcgtgtat aagagttggt tatcttttcc ggctttttcc tgcctgacga tgaatgtggg
      301 ttcaactgtg accgatacac tgcgattgta aggatcgccg ggctcatgcc ctgttaagag
      361 agcaagcgat gtaacaaatt tgtgatcggt acttaataca aaaacgacca gcttattctt
      421 tttagctaaa gtgaattttg ctaacaggta gtcgttgtca tcgttacgga tagcaccaac
      481 cggatggata atagcctttt gtgactgtgc ccctagctgc gccgccaaaa cggaatcagg
      541 aataaattga gagaaaaccg aataactgat attggttgtg tcgccgaaat gtattagacc
      601 ggtgtctgaa ataacaagtg gagtttttaa gaatggaaaa gctttcaaaa aattttcagg
      661 tttaactggc ttgtcgcctg aaagttcgtc cgcttgattc ttacagccga gacacgaaat
      721 gatcactaaa ctaatggcga agattcgcat catacgattc ttttgttaaa aataatttta
      781 aaaagacaac gcgcttgaaa aataattttt agatttgcct aaaatttttt tacgtgttgt
      841 ctaattttac tattgctgaa gagaactaca tcaaatctat ttatcacttg cagcgggcgg
      901 atgataccgt aagtaccaac gcattagctg aacggctcaa aacaaagcca gcctctatta
      961 ccgacatgct taagaaattg caggcaaagg gattggtaaa ctacaatcgt tacaaaggct
     1021 tccggctttc ccgggacggc aataaggccg cgcttgcaat aatcaggaga caccggcttt
     1081 gggaatactt tctcgttgac caattacagt ttagctggga agacgttcac gaagttgccg
     1141 aacaacttga acacgtgagc aaccgcaaac tcgtcgacaa actggatgcg ttccttggat
     1201 atccaaaatt tgatccgcat ggtgatccaa tacctgacag caacggcagg atcaacctgc
     1261 aggatcagat cccgctgttc acgttaccgt tacatactgc tgccgtgatc acctcggtaa
     1321 aaagcgagtc aagtgatctg ctctcatttt taagcagtag aaaaataacc atcggaacaa
     1381 aggtggaagt aaaacggcgg ctcgattttg acaattcgct tgaggttaag gtacggagcc
     1441 gacagccgat ccacattagt gaacaagtgg ccaatgcaat acaggttaac ccgttataat
     1501 atttttttgc tatgatgaat tatggtgtgc aaaactcatt aagcgacgtt catgaaacgg
     1561 tagatgtaac gcagcaacgc aagggctgga aacgattcct tccctacctc ggtcctgcgt
     1621 acctcgtaag tgtcgggtat atggatccgg ggaactgggc gaccgatttg cagggcggcg
     1681 cgaaattcgg atataccctt atctgggttt tattgatgag caatttgatg gcgctactcc
     1741 tccaatccct aagcgcacga cttggcattg ttagaagaaa agatcttgca caggcaaacc
     1801 gcgaagtcta tcccccactt acaaatttct gcctgtatgt tttggccgag tttgcgatcg
     1861 cggcgtgtga cctggcagaa gtcctcggaa tggcgcttgg tattgagttg ctaacagggc
     1921 tgccgctggt atatggcgtt ttgatcaccg tgctcgacac gtttctgctt ttttacttac
     1981 agaagaaagg tattcgtgcg atggaagcct ttatcatttc gcttgttttg atcatcggct
     2041 gttcgttcct ggttgagata ttcctggcaa agccggaagc cggtgaactg atcagggggt
     2101 tcattcctac gcctttaagc aatgaggcat tgtatatagc tgttggtatc attggagcca
     2161 ccgtcatgcc gcataatctg tatctccatt cggctttggt gcaaacaaga aagatccgaa
     2221 acaatcagca tgggatcaaa aaggcattga aatataactt cattgatagc accattgctt
     2281 tgaatgcagc tttttttgta aatgccggaa ttcttatcct ggctgcttcc gtgttttatt
     2341 ttcatggaca atcatctgtg gcaaagatcg aagacgcgca ccggttgctg caaccaatgc
     2401 tcggaactaa gctcgcacca attctctttg cggttgccct tatcgcttcg ggacaaagct
     2461 caaccatcac cggcaccctt gccgggcagg tcgtgatgga aggatacttg catctgcgaa
     2521 taaatccctg gctcagaagg ctactcaccc ggttacttgc gatgattcct gccgtagtgg
     2581 tgatctcaat ttatggggaa cagaaggttg atgacctgct cgtgctgagc caggtactat
     2641 tgagcctgca gttaggcttt gcgatcattc ctctgatcca ttttgtaagt gacaaagtaa
     2701 gtatgggcca gtttgcaatc aagcttccca caaaaattgt cgcatggtgc gtggcgggtt
     2761 tcctggtctt tttaaatgta cgattggttg taaatgagat gttgggagta tttgcacaag
     2821 acgggcagat ttttctgaaa gttcttattt caattgccgc catattattt gcctggttgt
     2881 tcgtaatgat gaccatatat ccgttttatt caagaagaaa gacgcaacga agcgagagca
     2941 ttcacggcga gataccgcag ttgcaccagt tatcggtaca gccgttcaaa cgcgtggcgg
     3001 tcgcgctcga tttcaatagg atggatgaga aactgatcgc acatgcaata aagcaggggg
     3061 aattggaggc ttcatatctt cttgtccata tcgtggaaac cgtttctgca agtttctccg
     3121 gaacggcaac agatgatatt gaaacgatta aagacaaaga acgtcttgaa gcgcttgctt
     3181 cgcaaatgaa gcaaatggga tacaatgtcg atactgagat cggctaccaa agcagggtga
     3241 gtgagatcgt tagaatcgtt aagaagtacg gtgctgatat tttggtcatg ggagctcatc
     3301 ggcacactgg gctgaaagac gttctatatg gcgccacggt aaaccaggta cgacataagt
     3361 taaccatccc ggttctgatc gtaaattgat ggcagcaatc attcgaaata tcgagcccgg
     3421 cgacaatgaa agccttgcat tcatcgtacg gcatgtgctt aaggagttca acgctgataa
     3481 accgggcacc gcttattttg aatcgtcgac ggacaatatc cacggcgtct ttgaaaaacc
     3541 acgatcaaaa tattttgtgg ctgagttgga tggcaaagtg gttggcggcg gcggcatcta
     3601 tgcaacagac ggccttccgg aaggttattg cgaacttgta aaactatact tgctgaaaga
     3661 ggcacgaggc accggtttgg gccgctctct tcttgaaaaa tgtttcgcat gggcaaaagg
     3721 gaaaggttac acccacgtgt acctggaaag catgacggaa cttatggatg ccgtcggact
     3781 ttacataaag ctaggtttca aatacatcga ccatccgctc ggtaactgcg gtcacgccgt
     3841 ttgcggcatt tggatgacca gggaactatg accgggcttt ctgatatact tatcgccgtc
     3901 ttccgtttga atatatcata atatattgga ggagtatggc taacgatgct atcgctgcaa
     3961 ccacataagt caatgccgcc cagttcaatg catctttcgc cttcgcatgt tcctgcggta
     4021 atgtaacatc ggtccgttcc agccaggcaa gcgcccggtt actggcatcg tattccacgg
     4081 gcagagtaat aaacgcaaag agcgtcgtga gcgcaaacaa accgatgccg atcaatagca
     4141 atgccggaaa cgccttgatc attataatac cagccagcaa tatccattgg acgatgttgc
     4201 tactaaactg aacaaatgga accaaccggc ttctcagcat cagccatcta taagcggtcg
     4261 catgctgcac cgcatgcccg cactcatgcg cagcaacagc ggtggacgct atgctcttac
     4321 cgttatagac atcggcgctg aggttgacgg tttttgtaag tggattataa tggtcggtca
     4381 aatagccgtc tgaagaggta acttttacat cataaatacc attctccctt agcatctttt
     4441 cagcgacctc tttacctgtc aaagcttgtg ataaaggcat ttggctgtac tgcaaaaatt
     4501 tgtttttcag ggtggctgag accaggaagc taattcccat aaaaagcagg gatagtaaga
     4561 atattgagct catttttaag cgtttatctt ttcttcagca aatttataac catttcaaaa
     4621 tcagtagata caaacgttct tgttaagaat taaaacgaca agctgacggc ttgaatcggt
     4681 ttacgcgcca atgagagcga cattctgtcc aacggccgct caaggtccct gggttagatc
     4741 aataaaaagt tttcaacaac ctcaaaaatt tattttgtaa tgtagctcat tattgtaatt
     4801 tagtggcaga atttaatggg ttagtaagta aaaggtcggt agtcatgccg gcctttttta
     4861 tttaagcaaa taatgagttt tatctaaccg cctgcacgat acattctcgc cattgtttca
     4921 tacctggcgg tttgcatgca atcgaattat ctttatgaga tgagtaaagt taaaactgcc
     4981 ttcttttgtt ctagctgcgg atatgaaagc gcaaaatggt tgggaaaatg tcccgcttgt
     5041 aatacctgga acacttttat cgaagaagtg attgagagaa atcagcgcga aaaaaatctt
     5101 tggaaagaga tgtcgggaga aagacaaacg accaaagcaa aattgctgga tgaagtcgag
     5161 aacatcacag agcaacgcgt tataacaact gatcatgagc tcaaccgcgt attaggaggt
     5221 gggattgttg aaggcagttt gatcctgatc gcaggcgaac cgggaattgg caagagcact
     5281 ttgttgctgc aggatgcgtt acttcttcaa aacattatcg ttttatacat aagcggagaa
     5341 gaaagtgaaa agcagatcaa gatgcgcgcg aacaggctga acattcaaaa tgaaaacttc
     5401 tatatactta cagagacttc gttgtcagtg atattttccg aaatcaaaaa actggatcct
     5461 tctcttgtca ttgtcgattc aattcaaacg ttacagtcag ataacgttga cgccgctccc
     5521 ggcagcatta cgcaggtaag agaatgcgca gcgagtcttc aacgatttgc gaaagaaact
     5581 caaacacccg tttttttgat cggccacata acaaaagatg gaatgatcgc gggaccgaaa
     5641 attcttgaac acatggttga tacggtgtta cagtttgagg gcgatcaaca ttatgcctac
     5701 agaatcttac gaactgtaaa aaatcgtttt ggcagcactg ctgagcttgg catctatgaa
     5761 atgatgggca acggtatgag gatggtcagc aacccttcag aaattttgat cccgcaaaaa
     5821 gatgaggtct taagcgggag
//
LOCUS       DASQJI010000074         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_926558,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000074 DASQJI010000000
VERSION     DASQJI010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926558"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VEV83_02405"
     CDS             <1..772
                     /locus_tag="VEV83_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HYK43988.1"
                     /translation="IGGDVYVTNDVPHFITIPTTAGTGSEVGRSAIIADDETHQKKIL
                     FSPKLLAKIVFVDPLLTMELPPFITAATGMDALTHNMEAFLAKMPHPMCEGIALEGIS
                     LINQSLEKAVNEPDIESRSKMLIASLMGAVAFQKGLGVVHSLAHPLSSLLDTHHGLAN
                     AVNIPYGMEFNIEGFEHKFKRIARTLELKDETGDGVVKYLFDLNSKINIPHKLSAIGV
                     KEEHIETLADLALADFAHPNNPKPVNREDFRNLYRKAL"
     gene            787..1518
                     /locus_tag="VEV83_02410"
     CDS             787..1518
                     /locus_tag="VEV83_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617516.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HYK43989.1"
                     /translation="MKKKIGISFTSTHFQNYWNWFTKEELGDDVELVELSFEKDNVND
                     IQSCDAFILTGGVDVHPSFYNGKTIYENSPSSLQLPRDIFEEKIYRHAQKHKLPVLGI
                     CRGMQLINVLEGGRLIQDLQHHNVKHRKEEKDKEHTIIAQHDTLLSNIAGSLSGHVNS
                     AHHQAIDPDHIGDNLVANAHDDDAEQIIEGLEFKNKEGKGFMLCVQWHPERMQDKDQN
                     PFSQKIKERFLEEVRNTTRSTDADH"
     gene            1505..>2241
                     /locus_tag="VEV83_02415"
     CDS             1505..>2241
                     /locus_tag="VEV83_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYK43990.1"
                     /translation="MQIINPANEEIIGEVPEDTHETLKKKFDVLRSGESDWQKRSLEE
                     RIAVIKNFSALLETHIEPLSNVLTSEVGKPLQQSGNEIKGGRARIQWLTDNASKYLSD
                     EVMSATNGMEEKISYEPLGVICNISAWNYPYLVGINVFVPALIAGNAVMYKPSEYATL
                     TGLEIAKLLRQAGVPENVFIVATGAADVGQALLDLPFDGYFFTGSYKTGRYIYQQVAS
                     KMVPCQCEMGGKDPLYVADDIGDIKKVA"
BASE COUNT          703 a          460 c          530 g          548 t
ORIGIN      
        1 tatcggcgga gatgtgtatg tgacaaatga tgtacctcac tttataacaa taccaaccac
       61 tgcaggcaca ggcagcgaag tgggcagaag cgcgatcata gcggacgatg aaacgcatca
      121 gaaaaagatt ctcttctccc ccaaactgct tgcgaaaatc gtttttgttg atccattgtt
      181 gacgatggag ttgcctccgt ttattacagc ggcaactggc atggatgcac ttactcataa
      241 catggaggcg ttccttgcaa aaatgccgca tccgatgtgt gaaggaattg ctttggaagg
      301 aatttcgctc atcaatcaat cgcttgaaaa agcggtgaac gaacccgaca ttgaatcaag
      361 aagtaaaatg ctcatcgctt cgttgatggg tgcggtcgca tttcaaaaag gtttgggtgt
      421 tgtacattca cttgcccatc cgctgtcttc attgctcgac acacatcatg gccttgcaaa
      481 cgcagttaat attccgtatg gaatggaatt taatattgaa ggatttgagc ataagttcaa
      541 acgcattgcg cgaacactcg aattaaagga tgaaacaggc gatggtgtgg tgaaatattt
      601 attcgacttg aattcaaaaa tcaatattcc tcataaactg tcggcaattg gcgttaaaga
      661 agaacacatc gaaacattgg ccgatctcgc gctggcagac tttgcgcatc ccaataatcc
      721 gaagccggtg aaccgtgaag attttagaaa tttgtaccgg aaagcgttat agaaagacgc
      781 cgaaaaatga aaaagaaaat aggcataagt tttacaagca ctcattttca gaattattgg
      841 aactggttca caaaagaaga gctcggagat gacgtggagt tggttgagtt atcattcgag
      901 aaagataatg ttaacgatat tcaaagttgc gatgccttta tccttacagg cggcgtggat
      961 gtgcatcctt ctttttataa cggtaaaaca atttatgaga atagcccgtc atcacttcaa
     1021 ctgccgcgcg atatttttga agaaaagatc tatcgtcatg cccaaaagca caagctgccc
     1081 gtgctcggca tttgccgcgg catgcaattg ataaatgttt tggaaggagg acggcttata
     1141 caggacttgc aacatcataa cgtaaaacat cgcaaggaag aaaaagataa agaacacacg
     1201 atcatcgcgc aacatgatac gttgttatca aacattgcgg gttctctttc aggacatgtg
     1261 aacagtgctc atcaccaggc aatcgatccg gatcatattg gagacaacct ggtggcgaac
     1321 gctcatgatg acgatgcaga gcagatcatt gaagggctcg aattcaaaaa caaagaagga
     1381 aagggcttca tgctttgcgt gcaatggcac ccggaaagaa tgcaggataa agatcagaat
     1441 cctttttccc aaaagatcaa agaacgattc ctcgaagaag tacgaaacac aacaagaagc
     1501 accgatgcag atcattaacc cggccaacga agagatcatt ggcgaagtgc cagaagacac
     1561 gcacgaaacg cttaaaaaaa aatttgacgt gctgcggtcg ggggaaagcg attggcaaaa
     1621 aagatcgctc gaggaaagga tcgcagtgat caaaaatttt tcggcgttgc tcgaaacgca
     1681 tatagaaccg ctttcgaatg ttttgacatc ggaggttggc aagccgttgc agcagtccgg
     1741 caatgaaata aaagggggaa gagcaaggat acaatggctc acagacaatg caagcaaata
     1801 cttatctgat gaggtaatga gtgccaccaa tggcatggaa gaaaaaattt cttatgaacc
     1861 gctcggtgtc atttgtaaca tttctgcctg gaattatcct tacctggtcg gcataaatgt
     1921 ttttgtaccc gcattgatcg ctggtaatgc agtcatgtac aaaccttctg aatatgccac
     1981 actaaccggc ctggaaattg caaaactgct gcggcaagcc ggcgtaccgg aaaatgtttt
     2041 tatcgttgcg accggcgctg ctgatgtcgg acaagctctg ctggatcttc cgtttgacgg
     2101 atattttttt accggctcgt acaaaaccgg ccgatacatt taccaacaag ttgcatcaaa
     2161 aatggttccc tgccaatgtg agatgggagg aaaggacccg ttgtatgttg cagatgatat
     2221 tggtgatata aaaaaagtcg c
//
LOCUS       DASQJI010000075         2882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_619422,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000075 DASQJI010000000
VERSION     DASQJI010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619422"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1545
                     /locus_tag="VEV83_02420"
     CDS             <1..1545
                     /locus_tag="VEV83_02420"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK43991.1"
                     /translation="MLAFAVHKSRGIWRIPNNGFQIGNLFRFNIRTQIQTTIIGVSIF
                     SFLVIGAVTISFFIARFDKSTYDQLFKTAQVLVNEIQQTMKSQLIPDDIFDISDFGAG
                     SDFEKKILDIAMLHNTDINFYAKNGSLMVTSQSSIYNKSVLSNKIDPDAFYEMHYRHS
                     TKFVHTEQIGNFEYQSIYMPVKDENDETIAYLNIPSLSSHSELQEEISDFLVTLIILN
                     ALIFIFAGAIAVTLTGRITSSLELIGNKMKDISIGHTNEEIEWKGKDEIGVLVDEYNK
                     MVKKLEQSVNALAKSEREGAWREMARQVAHEIKNPLTPMKLSVQYLQRAIENNAPNTR
                     ELSQNVASTLVEQIDQLSKIAGDFSQFANIEHIKPERFDVSEVIHALVNLYNADSHLQ
                     IRWKHEKRNFDIMSDKTQINRLFTNLIKNALEASTENKTAYISINQFAQNGNVVISLS
                     DKGHGIERSLQSKIFDPNFTTKSSGTGLGLAICKAIVEKANGKIWFETEPGRGTTFFV
                     ELPLAH"
     gene            1614..>2882
                     /locus_tag="VEV83_02425"
     CDS             1614..>2882
                     /locus_tag="VEV83_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HYK43992.1"
                     /translation="MISSLDDFQNVFFIGIAGAGMSAIAQYLKGIGKNVSGSDRFFKD
                     GSFNETRNKLEALGILCVEQNASGIDHNTELVVVSAAIEDTVAEVVKAKQLRIPIIKR
                     SEILALICSSKKTIAIGGTSGKSTTVAMLFEILDRAGLEPNLITGAGLVRLIKQGEIG
                     NAKNGKGEWLIIEADESDGSIIHYHSEVGVLLNIDKDHKDLPELIELFTVFRSNSKKF
                     LVNRSHILTAALSQDARQDFSSDENIPAGYIATDFQQRGFTISFSINGVPFTVNAMGK
                     HSMENALAASSAANIAGVDLSVCAQALKNYQGIYRRHQVIGNKNGIWLIDDYAHNPAK
                     CAASIRACQPVASKLIAWFQPHGYGPTKFLRKDFVKEIAAALRPQDEIWMSEIFYAGG
                     TTTKDISAADLINDIKPLHANAFFVENRNDF"
BASE COUNT          872 a          625 c          669 g          716 t
ORIGIN      
        1 atgctggctt ttgccgtgca caaaagcaga gggatatggc gtatcccaaa taacggattt
       61 cagatcggaa acctttttcg tttcaacatt cgaacgcaga tccagacaac catcatcggc
      121 gtgagcatct tttcattcct cgttattgga gcggtaacga tttcgttttt cattgcccgg
      181 ttcgacaaga gcacttatga tcaactgttc aaaactgcgc aggtactcgt aaatgagatc
      241 cagcagacca tgaaatcgca gttgatcccg gatgatattt ttgatatcag tgatttcggt
      301 gccggcagcg attttgaaaa aaagatatta gacatcgcta tgctgcataa caccgacata
      361 aatttttacg cgaagaatgg aagcctgatg gtgacttccc aatcgtccat ctataataag
      421 tcagtcctga gcaataagat agatccggac gctttttatg aaatgcatta ccggcacagc
      481 acaaagtttg ttcacaccga acagatagga aatttcgagt atcaaagtat ttacatgccc
      541 gttaaagatg aaaatgatga gaccattgct tatttaaata ttccgtcatt gagctcgcac
      601 agtgagttgc aggaagagat atccgacttc ctcgtaacgt taattattct gaacgcactc
      661 attttcattt tcgccggcgc gatcgctgtc accctcacag gccgaatcac ttcttcgctt
      721 gagctcatcg gcaataagat gaaagatatc agcattgggc acaccaacga ggaaattgaa
      781 tggaaaggta aagatgagat cggcgttttg gttgatgaat acaacaagat ggtcaagaaa
      841 ctcgaacaaa gcgttaatgc actcgcaaag agcgaacgcg aaggagcgtg gcgcgaaatg
      901 gcaaggcaag ttgcacacga gataaaaaat ccgctgacac ctatgaaact aagcgttcaa
      961 tacctgcagc gcgcaattga aaacaatgca ccgaatacgc gcgaactttc acaaaatgtt
     1021 gcctccacac tcgtcgaaca gatcgatcag ctttcgaaga ttgccggcga cttctctcaa
     1081 tttgcaaaca tagaacacat taaacccgag cgctttgatg tgagcgaagt tattcatgcg
     1141 cttgtgaacc tgtataatgc ggactcacat cttcagatca ggtggaaaca tgaaaaaagg
     1201 aatttcgata tcatgtctga caagacgcag ataaaccggc tgttcacaaa cctgatcaag
     1261 aacgcgctcg aagcttcgac agaaaataag actgcataca tttctataaa ccagttcgcg
     1321 caaaacggca atgtggtgat ctctttgagc gacaagggac acggtataga acgatctttg
     1381 cagtcgaaaa tttttgatcc caatttcact accaaatcat ctggcaccgg gcttggtctt
     1441 gcgatctgca aagccatagt tgagaaagcg aatggcaaga tctggttcga gacagaaccg
     1501 ggaagaggca ctacgttctt cgtcgaattg ccattagcgc attaggcgcg tcattttaac
     1561 tgctgaggcg tttcaaagct ttcgtcgatg tgcattatat tgccggcgtt attatgatct
     1621 cgtctttaga tgattttcaa aacgtttttt ttatcggcat tgcgggtgcc ggcatgagtg
     1681 cgatcgcgca atatcttaaa ggcattggca aaaacgtaag cggtagcgac cgctttttca
     1741 aggatggatc gttcaacgaa acaaggaaca aacttgaggc tcttggaatt ctttgcgttg
     1801 aacaaaatgc gtccggcatt gatcataata cagaactggt ggtggtctca gcagcaattg
     1861 aagataccgt cgcagaggta gtgaaggcaa aacaactgcg cattcccatc attaagcgaa
     1921 gcgaaatact cgctttaata tgcagcagta aaaaaacgat cgcaatcggt ggcacatcgg
     1981 gaaaaagtac gacggtggcg atgctgtttg aaatattaga tcgtgccggc ctcgagccta
     2041 atcttattac aggtgccgga ttggtacgcc tgataaagca gggtgaaatc gggaacgcga
     2101 aaaacggcaa aggcgaatgg ctgataattg aagctgatga aagcgatggc agcattatac
     2161 attatcattc ggaagttggc gtgttattaa acatcgacaa agaccataag gaccttcctg
     2221 aattgattga actattcacc gtctttagaa gtaacagcaa aaaattttta gtcaaccgct
     2281 cgcatatatt aacagcagct ctttctcagg acgcaaggca agatttttcc tcagacgaaa
     2341 atattcctgc cggctacatc gcaacggatt ttcagcaacg cggattcacc atctcgtttt
     2401 caataaatgg agtaccgttc actgtaaatg cgatgggaaa gcacagcatg gaaaacgctt
     2461 tggcggcaag cagcgcagcg aacatcgcag gtgttgatct atcggtgtgc gcgcaggctt
     2521 taaaaaatta tcaaggtatt tatcggcgac accaggtgat cggaaataaa aatggaattt
     2581 ggctgatcga tgattacgcg cacaaccctg ctaaatgcgc agcgagtatc cgcgcctgcc
     2641 agcctgtagc gtcaaaactc atcgcgtggt ttcagccaca tggctacggc ccaacaaagt
     2701 tcctgcgcaa agatttcgta aaagaaattg ctgcagcatt aaggccgcag gatgaaattt
     2761 ggatgagtga gatcttttat gcggggggca cgacgacaaa ggatatttca gccgctgacc
     2821 tgatcaatga tatcaagccg ctgcatgcaa acgctttttt tgtcgaaaac aggaacgatt
     2881 tt
//
LOCUS       DASQJI010000076         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1694467,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000076 DASQJI010000000
VERSION     DASQJI010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694467"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1677
                     /locus_tag="VEV83_02430"
     CDS             <1..1677
                     /locus_tag="VEV83_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK43993.1"
                     /translation="VAYYNIAGVYVEDQDYKHALFYLFKAKDVDEKAKDSSALLYDNY
                     SLASAYSRMGRQDSALLYIRRAYNLMQQLHDKDMPAAILNVYAEIYLAAHDTTRADNY
                     YRLSIPYAEAIEDNEVLVSNYYGLAQVFDERSIPDSAIAYALKGLTLAKQGRFFKQVL
                     DITSFLSGVFKNKKVFDSAFYYQELSIAIKDSLFNVAQVRKLQDLKFSEQQRQQSIET
                     AQLKYQNRVRLIVVIAAALVLLIIAVLLWRNNRQKQAANILLQQQKEKVESALNELRL
                     TQAQLIQSEKMASLGVLTAGIAHEIQNPLNFVNNFSEVNAELIRELKAEHRKPLDKRD
                     LELENDVLDDLEVNEEKVTLHGRRASSIVKSMLQHSRTSTGQREPTDINALADEYLRL
                     SYHGMRAKDKSFTVALETHFDPALSLPQNKLNVVPQDIGRVLLNLYNNAFYAVSAKAP
                     ATADAVSEKLVARSLQLDANSAPYVPTVTVATKKLNDRIEISVKDNGSGIPQNIVDKI
                     FQPFFTTKPTGQGTGLGLSLSYDIIKAHGGEIKAETAESGGTEFIIQLPA"
     gene            1839..2603
                     /locus_tag="VEV83_02435"
     CDS             1839..2603
                     /locus_tag="VEV83_02435"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYK43994.1"
                     /translation="MHQPRHDSSRIQFQLERFLFFSDGIFAICITLLIIEIKVPDHSL
                     HIQTDSQLWNYLSNNSLDFLSFLISFGIIGHYWLVHHRIFGYAKNYTISLVWINLAFL
                     FSVVLLPFSSGLVGEFGSNTAMTLPYGIYVANMCFTGLMNCWLWLYVSNPRRDLLTRR
                     ISRARIELGLYRSLVTPLVFLVAFIISFFLPLVSRLVPVCIPIILHWGLKWLEKKADQ
                     KDMLEVQLAGAGTLSDEEADEANVTAKPSLSDVSDT"
BASE COUNT          809 a          620 c          660 g          713 t
ORIGIN      
        1 gttgcttatt acaatattgc cggcgtgtat gtggaagacc aggattacaa acacgccttg
       61 ttttatcttt tcaaagcaaa agacgttgat gaaaaggcga aggacagttc tgccttgttg
      121 tatgataatt attcgctcgc ttctgcttat tcacgcatgg gcaggcagga ttcagcacta
      181 ctttacatca ggcgagcgta caacctgatg cagcagttac atgataaaga tatgccggct
      241 gccatcttaa atgtatatgc agagatatac ttagcggcgc acgacacaac gcgtgctgac
      301 aactattatc ggctgagtat tccttatgca gaggcaattg aagacaatga agtgcttgtt
      361 tcaaattatt atggattggc gcaggttttt gatgagagat ccattcctga ttccgcaatt
      421 gcctatgcac ttaaaggttt gacactggca aaacaaggac gcttttttaa acaggtgctc
      481 gacatcacca gctttctaag cggtgtgttt aaaaacaaaa aggtcttcga cagcgcgttt
      541 tattaccagg agttgagcat tgccataaag gacagtttgt ttaatgtggc gcaagtgaga
      601 aaactgcagg accttaagtt cagcgaacag caacgacagc agtccatcga aacggctcaa
      661 ttaaaatatc aaaacagggt acggctaatt gtcgtaatag ccgccgcgct ggtgttgttg
      721 ataattgcag ttttactttg gcgtaataac cggcaaaaac aggcggcaaa cattttactg
      781 cagcagcaaa aagaaaaagt ggaaagcgcc ttgaacgagc tcaggctaac acaggcacag
      841 ctcattcaat ctgaaaaaat ggcttcgctc ggcgtgttga ctgccggcat cgcacacgaa
      901 atacagaacc cactcaactt cgtgaataat ttttctgaag taaatgcgga gttgataagg
      961 gagctgaaag cggagcaccg gaagccgctt gataaaagag atctcgaact agagaatgat
     1021 gtcctggacg atcttgaggt aaacgaagaa aaggtaacgc ttcatggcag gcgggcaagt
     1081 tcgatcgtga agagtatgtt gcaacattca cgaacgagca ccggtcaacg cgagccgaca
     1141 gacatcaacg cactcgcgga tgaatacctg cgcctttcct atcatgggat gcgcgcaaag
     1201 gataagtctt tcaccgtcgc cctggaaaca catttcgatc cggcgttgtc attaccccag
     1261 aacaaattga acgtagttcc gcaggatatc ggacgagtgc tgctgaattt gtacaataat
     1321 gcgttttacg ccgtgtccgc gaaagccccg gcgacggcgg atgcagtgag tgaaaagctc
     1381 gtagctcgca gcttacagct cgacgctaat agcgcgcctt acgtccccac cgtcacagtt
     1441 gccacaaaaa agctgaatga taggattgaa atttctgtaa aagacaacgg ctccggcatc
     1501 ccacaaaaca tcgttgataa gatctttcag cccttcttca ccacaaagcc aaccggacag
     1561 ggcacaggtt tgggtttgag tttaagttat gatattatca aggcacatgg tggagagata
     1621 aaggcggaaa cagcagaaag tggcgggact gagttcataa tacagttgcc ggcatgacag
     1681 ctttcttgaa catcgccggt ggccaatccc tggcgaaccg cggaaatgga ggcactctta
     1741 caaaggcctg caaaaccgca aaccggaaaa cgagaaactg aaaagctctt tttaaattta
     1801 cggcgtaaat gaaagcttaa caacatcaaa ccatttgtat gcatcaaccg aggcatgaca
     1861 gttcaaggat ccagttccag ttggaaagat ttcttttttt cagtgatggc atttttgcga
     1921 tctgtatcac attgctgata atagagatca aagtgcctga tcattcattg catattcaaa
     1981 ctgatagtca attgtggaat tatctttcta ataattcgct cgatttttta agcttcctca
     2041 tcagcttcgg tattatcggc cactattggt tagtgcacca tcgcattttt ggatatgcaa
     2101 aaaattatac catctcactc gtttggataa atcttgcttt tcttttctcc gttgtgttgc
     2161 ttccttttag ctccggcctg gtgggcgagt ttggctcaaa tacggcgatg accctgccct
     2221 atggaattta tgtagcgaat atgtgtttca ccgggttaat gaattgctgg ctttggctgt
     2281 atgtaagcaa tccgcgccgc gacctgctga cacgcaggat ctcgcgcgca aggatagagc
     2341 ttgggttata cagaagcctg gtaactcccc tcgtgttcct ggtcgcattt attatttcct
     2401 tttttcttcc gcttgtgtca aggcttgtcc cggtttgcat tcccatcatc ttacattggg
     2461 gattgaaatg gcttgagaaa aaagcagatc agaaagacat gcttgaagtg caattagcgg
     2521 gtgccggcac actgtctgac gaggaagcgg acgaagcaaa cgttactgcg aaaccttcgc
     2581 tgagcgacgt gtctgacact tgaaaagtgt ctgacacctt cacttcaacg agctgaaata
     2641 aactggcgcg ggagaaaaag aacacagtaa atttaccttc gtcattccaa tcgataaaat
     2701 ggacgataca caaggcgaac tgcagtcacc cgatgtcgaa ctgaaagaac aactagccag
     2761 taaaacaatt gagctggagc gaacgcaaca tgagctacat at
//
LOCUS       DASQJI010000077        20931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_312572,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000077 DASQJI010000000
VERSION     DASQJI010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 20931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20931
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312572"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VEV83_02440"
     CDS             complement(<1..332)
                     /locus_tag="VEV83_02440"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase"
                     /protein_id="HYK43995.1"
                     /translation="MKKAPGIFIILLGIGLASCGQPPQQKFAVTKTADEWKKILTPDQ
                     YSVSREAGTERPFTGEYWNNHEKGTYYCVCCGVPLFSSETKFESGTGWPSFYAPLSKK
                     YVGEREDNS"
     gene            complement(393..1559)
                     /gene="lpxB"
                     /locus_tag="VEV83_02445"
     CDS             complement(393..1559)
                     /gene="lpxB"
                     /locus_tag="VEV83_02445"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HYK43996.1"
                     /translation="MKYYIIAGEASGDLHGSNLIKELLRLDAGAGIRCWGGDLMQAAG
                     GTLVKHYRDLAFMGFAEVAMNLKTILSNLKFCKEDVLRFKPDVLVLIDYPGFNLRVAK
                     WMWEIRNKGLERRNEKGNNSSPLTKIIFYISPQVWAWKESRVPKMKKYIDKMIVILPF
                     EKDYYKNKWDWDVEYTGHPLVQVIDHFKEANQTSNLNPQTSNIVALLPGSRKQEIAKK
                     LPIMLEVSKSFPDHQFVVAKASALDDEFYAGFMHLYTNVSSVKNKTYELLMQAKAALV
                     TSGTATLETALFEVPEVVCYKGGNISYQIAKRLVKIKYIALVNLIMNKPVVKELIQDD
                     LTVENLKDELSQLLNDPERRRQLQQDYHELRQMLSAGGDASANAARIIFNFSSA"
     gene            complement(1660..1959)
                     /locus_tag="VEV83_02450"
     CDS             complement(1660..1959)
                     /locus_tag="VEV83_02450"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK43997.1"
                     /translation="MKNTTVQISNNEKDQRFEMPVGDGLAVIVYRWQNGKLALMHTEV
                     PPEAEGKGIAAKLAKFAFEQAKQQQRKVLVYCPYISSYLRRHPEYDELVERDYNK"
     gene            complement(2068..2361)
                     /locus_tag="VEV83_02455"
     CDS             complement(2068..2361)
                     /locus_tag="VEV83_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK43998.1"
                     /translation="MKRNSLLFGIILGLIAPILGMLGYYFWKFYPTYSLGAFFDVIFS
                     NKSILSGLSTFALFANVVLLTLYLNTRRDETAKGIFLISCVYAIAAIVLKLFI"
     gene            complement(2358..3155)
                     /gene="surE"
                     /locus_tag="VEV83_02460"
     CDS             complement(2358..3155)
                     /gene="surE"
                     /locus_tag="VEV83_02460"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HYK43999.1"
                     /translation="MAKASKGKKDVPVILVTNDDGVSAPGIQTLVEAVKELGKVVVVA
                     PDKPQSGMGHAITIGHPLRLTPVQVFGEIEAYQCSGTPVDCVKLAVDKVLHRKPDMCL
                     SGINHGANHSINVIYSGTMSAALEASIESIPSIGFSLLDYSIEADFSGAAYYANLLVK
                     QLLTKKIDKHLCLNVNIPPVKKELLKGLKICRQAYAKYEERFDERHDPSGRKYYWLTG
                     EFQNFDTGRDTDVWALENNYISVVPVQFDLTNHKLKTKMQKVLTRRH"
     gene            complement(3327..4904)
                     /gene="atpA"
                     /locus_tag="VEV83_02465"
     CDS             complement(3327..4904)
                     /gene="atpA"
                     /locus_tag="VEV83_02465"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HYK44000.1"
                     /translation="MVGIKPDEISAILREQLTDFKTAAQLEEVGTVLQIGDGIARVYG
                     LNNVQAGELVEFESGVRAIALNLEEDNVGVVMMGETAGIKEGANVKRTGLIASIKVGN
                     GLVGRVINTLGEPIDGKGPIAGELFEMPLERKAPGVIFREPVKEPLQTGIKAIDAMIP
                     IGRGQRELVIGDRQTGKSAICIDTIINQKEFYAAGKPVYCIYVAIGQKASTIAGVMKT
                     LQDNGALAYTTIVAASASDPAPQQFYAPFAGAAIGEFFRDTGRPALIIYDDLSKQAVA
                     YREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKIITNDKVASQMNDLPDSIRHLVKG
                     GGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLEGNLFNSGIRPAINVGISVSRVG
                     GNAQIKSMKKVAGTLKLDQALFREMEAFSKFGGDLDPATKVVIDKGTRNVEILKQPQY
                     SPYPVEKQVAIIYLGTQGLLRDVAVKNVKAFEEHFLMEMETKLPHVMAEFKKGNLPED
                     GVNQMVELAQGIIPAYK"
     gene            complement(4941..5504)
                     /gene="atpH"
                     /locus_tag="VEV83_02470"
     CDS             complement(4941..5504)
                     /gene="atpH"
                     /locus_tag="VEV83_02470"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HYK44001.1"
                     /translation="MRNKLIAQRYTKALMDLAVQTNQVEEVKADIDFIRATLTPDLRM
                     ALSSSVISDSKKIEIFRAIFKERLKPLTCSFFDLVFSKRRELLLPEIADEFIEKYREL
                     KGIEIIEITTAVEISDKIKNDLRLRFQSLERFRHKTVEIRSKVDDSILGGFIAKSHDI
                     LFDASLKNDLQYIGRQFLENLYVQRIR"
     gene            complement(5519..6031)
                     /gene="atpF"
                     /locus_tag="VEV83_02475"
     CDS             complement(5519..6031)
                     /gene="atpF"
                     /locus_tag="VEV83_02475"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HYK44002.1"
                     /translation="MQLLTPALGLIIWTLIAFLVVFFILKKYAWPAIINGLSKREQVI
                     ADSLATAERIKAEMAQFKNENEAVLAKARSERATILKEAKDASDKMIADAKDKAKTEY
                     DRIVTDAQSAIEQQKNAAIVDVKNMIGKMVIEVTEKLIRKELVNKEDHEEYILKLADD
                     LTNTDSRGRN"
     gene            complement(6181..6426)
                     /gene="atpE"
                     /locus_tag="VEV83_02480"
     CDS             complement(6181..6426)
                     /gene="atpE"
                     /locus_tag="VEV83_02480"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HYK44003.1"
                     /translation="MDLLNVVLLADLANAGGAIGAGLAAIGAGIGIGQIGRGAVEAIA
                     RQPEASNDIRANMILTAALVEGVALFGVIVGILAMFI"
     gene            complement(6455..7636)
                     /gene="atpB"
                     /locus_tag="VEV83_02485"
     CDS             complement(6455..7636)
                     /gene="atpB"
                     /locus_tag="VEV83_02485"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HYK44004.1"
                     /translation="MTIRMVKPLLALGFSVFLLFFSIPVFAQGQLPETAEDTQKEEKK
                     GFDANEVIFGHVLDAHEFHFFSYKGADGTEHDAAIPLPVILYSPQKGFSAFNFSRFHH
                     GEETYNGYAVLNAEKIKEENLDPKKYNDGQIVAVNGNGQIDESVKVYDLSLTRNVVQM
                     IIALALLVWIMISIAKRYSSGQGVTSAPKGRQSLLEPVILFVANDVAKPNLGSRYQKY
                     LPYLLTVFFFILINNLVGLIPGTANVTGNIAFTFVLACISFIVILASSNKHFWGHIFN
                     PPVPTGIKPILLIVDLLGVFTKPFALMIRLFANMIAGHIIIISLISLIFIFGALSTAA
                     GWGFSPLSVAFVIFIYLIEILIAFLQAYIFTNLTAVFIGEAFAGGHEHEGHPEDIAVV
                     A"
     gene            complement(7758..8579)
                     /gene="murI"
                     /locus_tag="VEV83_02490"
     CDS             complement(7758..8579)
                     /gene="murI"
                     /locus_tag="VEV83_02490"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HYK44005.1"
                     /translation="MQQGPIGVFDSGYGGLTVLKEIQKKLPAYNYLYLGDNARTPYGN
                     RSFETVYHYTWQCVQWFFKQRCPLVILACNTASAKALRSIQQNQLAKNFPEKRVLGVI
                     RPTTETIGNYSTTGHVGILATTGSVQSGSYIIEIEKFFPQLAVVQQACPMLVPLIENN
                     DFENEGADFFIRKYLGELLAKDENIDTVLLACTHYPLIKQRIEKFLQPHISVVAQGEI
                     VAASLEDYLHRHPEIENQLEKSSTANFCTTDSNEDFDSHATIFYGREVQSKHVEL"
     gene            8721..10316
                     /locus_tag="VEV83_02495"
     CDS             8721..10316
                     /locus_tag="VEV83_02495"
                     /inference="COORDINATES: protein motif:HMM:NF014675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HYK44006.1"
                     /translation="MCLLFFFLAKLTDGQPSAFNSTSRSFDRATSISTSPKYEFRAVW
                     IATVMNIDWPANKTSGTNEQKQEFIDILDQQQKLGMNAVIVQIRPSADAFYASSYEPW
                     SEFLTGKQGVAPSPYYDPLAFMVQETHKRGMEFHAWINPYRAVFNVSSPVSSNHITKQ
                     HPDWFVKYGDKKYFNPGIPAVMQYLTQVVKDIVTRYDIDGIHMDDYFYPYRIAGKEFP
                     DRQTYLKYGGSMSRDKWRRSNCDSVVKMIHDVILEYKPLIKFGVSPFGVWRNSSADPK
                     GSETQAGQTCYDDLYADILLWLKEGWVDYIAPQLYWEIGNRLCDYETLLDWWSSNSYG
                     KQVYIGHGVYRAIERPTAAWRNPNELPNEIRLLRADDNVQGSVYYSSSSVLSNINGWA
                     DSLRFNYYRMPALIPPMNWIDTTAPKQPHISKIDIEPDKGGQAFTISGNGINKKETES
                     IKTFALYLSPSLVGLTDHPAAIIPADKSLKFDFSFLSTLIPKDWKKCYFTVTSVDREN
                     NESDPGNVIMLEKDDFNWEVKQK"
     gene            10345..10659
                     /locus_tag="VEV83_02500"
     CDS             10345..10659
                     /locus_tag="VEV83_02500"
                     /inference="COORDINATES: protein motif:HMM:NF019491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dabb family protein"
                     /protein_id="HYK44007.1"
                     /translation="MQLQNIFVHHVFFYLKQHDAANVAALVQGLQKLSSASTIRQFHI
                     GVPAETYRDVVERSYGVSWLVFFDNPADQESYQTDPVHLQFIRECSHLWNKVVVYDSV
                     NA"
     gene            10668..11588
                     /locus_tag="VEV83_02505"
     CDS             10668..11588
                     /locus_tag="VEV83_02505"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK44008.1"
                     /translation="MRKIIFAVFFICCFMYRSLEQPTIALYNGHVPNSKPYSTKEFWE
                     PQDNGDTIVHFISEPTLTIFLPDREKANGTAVIICPGGGYWINSIVKEGYAVAREFNQ
                     WGVAAFVLKYRIPNDSSMVDKKIGPLQDAQRALQLVRMHAKEWNVDVKKVGIMGFSAG
                     GHLASTAATHFTGSVIENGNNVDLRPDFAILIYPVISFQSNIGHLGSRDQLIGNNARQ
                     DLIDSFSNELRVTRQTPPTFLVHATDDDAVPVMNSIAFYEALLKYKIPAELHIYKAGG
                     HGFGMHNPTTQDEWMDRCRNWMQSMGWIGK"
     gene            11749..12126
                     /locus_tag="VEV83_02510"
     CDS             11749..12126
                     /locus_tag="VEV83_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44009.1"
                     /translation="MQKAILSGAAPSSIFSSEYIARTHAGPGILKKFFSWCATQDDNK
                     FMWLAISFFGLIGMVLPITAMAILFAGGNSLALWIIACAFNVPVLILNLAAQPSKIVL
                     SALTLAVLVDVCVIAVSLVVFAI"
     gene            12143..12454
                     /locus_tag="VEV83_02515"
     CDS             12143..12454
                     /locus_tag="VEV83_02515"
                     /inference="COORDINATES: protein motif:HMM:NF021165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44010.1"
                     /translation="MKKFIGIFLISIFAACVATSKFEPTAAELPALQAKVPGLTYEDA
                     MQGYKLYTSHCSNCHRLHNPNEFTATKWNKVLPEMFGKAKLSDGNQQQYVRDYLESKA
                     K"
     gene            complement(12499..13140)
                     /locus_tag="VEV83_02520"
     CDS             complement(12499..13140)
                     /locus_tag="VEV83_02520"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYK44011.1"
                     /translation="MTSWRKTFIYLLPLVLLLTTAAAFYFFSEWFGKKRGYFFGFLFY
                     WIVWCVTIPLLMIGARGVIELYKTRGPALGKKKLRNIAFLVFPLVVVYCYEFPKVIGN
                     ANQSVIVSSAVLAVVNGTFEEILWRGTFLKIMGENSRLYVLVSSLGFAIWHLAPQIVF
                     RNPHPGGAFSFVAVSFALGLLYSIVVKDTRSIFLTTVSHILFDFSGLGGRLYF"
     gene            complement(13140..13574)
                     /locus_tag="VEV83_02525"
     CDS             complement(13140..13574)
                     /locus_tag="VEV83_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44012.1"
                     /translation="MKVFLKILAGILLAFNGMSALYGGLNLLVYPNGNSLQLPLDHLQ
                     HSPFENYFIPGLILFSLNGLSSVFVCVTILLDSKRYAVLILMQGCILAGWIFVQSMMT
                     DFSSYLQLVFAIIALLLIFCGAMLARSDHPKISHQKNRINIA"
     gene            complement(13571..14080)
                     /locus_tag="VEV83_02530"
     CDS             complement(13571..14080)
                     /locus_tag="VEV83_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44013.1"
                     /translation="MEALKEWLWPYIISNIVFGLTILSALKKPMLARIFLGGFFLWAS
                     YFNSTSALNSPEIYLDYARLDPLPAYTNFINGFFSRHITPFVCTIAAGQFLIFAGMVL
                     NKRLTELACVGGIIFGLAIAPLGVGSAFPSTVSMAIAFHILLKKYDHDFIWHFKQYNS
                     QMHVKPASV"
     gene            complement(14067..14414)
                     /locus_tag="VEV83_02535"
     CDS             complement(14067..14414)
                     /locus_tag="VEV83_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44014.1"
                     /translation="MQIAVDLPGQLSNHVDEKQVCCLTGRLLWQSTVVRIAVRMPHRK
                     IVVQPAKLRPAMKINKAWHLAHRMPKNATTDQRIEWHLEHVKNCNCRTDIPAKVLEEM
                     RKRKIAVPGYGST"
     gene            14661..15962
                     /locus_tag="VEV83_02540"
     CDS             14661..15962
                     /locus_tag="VEV83_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HYK44015.1"
                     /translation="MPKTGDSNYINNEEQLKALFNYATIGIIVTDSRGTIVNFNKQAE
                     AIFGYLKEEVVGKTVELLIPADLRKAHEHHREDFYQQPSPRNMGHGRDLFGQRKDGSE
                     FPVEVSLSNYTLENELFIIAFVIDITTRKQHEAVVLQQKKELETITTQVKQLNRDLEK
                     KIQDRTKMLRETLSALEASKEDLSAALKNEKELGELKSRFVTMASHEFKTPLSTILSS
                     AFLLEKYNNTPDAVDKRLKHTERIKNAVADMKNILDDFLSLGKLEEGLIRANMATIPA
                     EVCFNEVDNAIVEMETNLKKGQRIDFIRNGDGQVMIDKHLLKNIVINLLSNAIKFSPE
                     NSLIEINCSTYNSTFALSVKDVGIGISAEDKEHLFERFFRAKNAINIQGTGLGLHIIA
                     KYLELMRGSIELESTLNEGSIFTIHIPKKRKHASEQKNIGN"
     gene            15931..17001
                     /locus_tag="VEV83_02545"
     CDS             15931..17001
                     /locus_tag="VEV83_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44016.1"
                     /translation="MQANKKILVIEDNPEVRENIAEILELSNYEVRTAENGKEGVETA
                     LQATPDLIICDIMMPELDGYGVLHLLSKHIETYGVPFIFLTAKSEKSDLRKGMELGAD
                     DYITKPFDGIELLKAIEIRLQKAEAVKKHFESSHTGNIDAFINDAGKLGRVQLTSDER
                     EVYDYKKKQLLYAEGQRPKAVYYIKKGKVKVYKTNEEGKELITNIFATGDFLGYTYIL
                     EEMNYKENAEILEDAEIMKIPKDDFVSLITNDTQIARQFIKIITHNVIEKEESLLNLA
                     YSSLRRKVAFQLLHILEKFRNNDNNKNELRISRENLAQIAGIATESLIRTLSDFKAEK
                     LIDIQSGTIVILNEDKLRNLPY"
     gene            complement(17018..17383)
                     /locus_tag="VEV83_02550"
     CDS             complement(17018..17383)
                     /locus_tag="VEV83_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44017.1"
                     /translation="MKLFLEKESQIEGIKKVFSAFYPFLKIEFYKKPLRTNNHSLKKE
                     AISSHTALLQLAKLNSRKGIDISQNRTVKDVEKDFESLGLFAEVFRKSGNVWIETSLT
                     NDWTLQQQNLEGEEITRGI"
     gene            complement(17437..18240)
                     /locus_tag="VEV83_02555"
     CDS             complement(17437..18240)
                     /locus_tag="VEV83_02555"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYK44018.1"
                     /translation="MKTILAPTDFSEVSLNAVRYAADLAVAIHAKLLLLHAVEVPAAV
                     GDMPVAGVSYDELSSENELLRVRKNLLEHTNDKISIEAKQLWGSLENELVKLCAYNKP
                     FAIVMGTHGNALAARYFLESTTVYVAKHLNYPVIVVPQDRSFKPIKKIVLATELKNLD
                     DLPWQQVTSLLNIFGASLHIVHVNKTDKEIGENLLKDLFSQHPLKTADPYFHVVENPN
                     VQKGISLFAEQNDADLVLVVPKKHGLFHKSDSRQFIFYSPVPVMALHKE"
     gene            complement(18359..19588)
                     /locus_tag="VEV83_02560"
     CDS             complement(18359..19588)
                     /locus_tag="VEV83_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44019.1"
                     /translation="MEPEHFQKWFRIAIFNLLLVALLGIILRYKIVFSLPFVNQKFLL
                     NAHSHFAFAGWVSQALMIFITAYIRMHLQRFQWKKYQYLLIANLFTAYGMLLSFPITG
                     YATVSIIFSTLSIFASYAFLIVAWTDLNKIGRNKIVHHWFKASFVFNALSSLGAFALA
                     IMMANKILHPNWYLAAIYFFLHFQYNGWFLFACMGLFASKLDEQLVSKKLQRNVFYAF
                     LFACVPTYFLSALWLPLPLWVYMLVVAAALTQFLAGTILLTAIMKKRKLIFSKAPTLA
                     LYTWCLSAIALTIKLFLQAGSTIPALSTWAYGFRPIIIGYLHLILLGVITLFILGYAM
                     YEGYLPHNKNAVRGMSIFIAGFIFNELLLLVEGLGAITYTAIPYVNEVLLFAAIVMFS
                     GLLILNVAGKKFAPKTV"
     gene            19779..20258
                     /locus_tag="VEV83_02565"
     CDS             19779..20258
                     /locus_tag="VEV83_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK44020.1"
                     /translation="MKKSILIVVAMFISSLLIFSCGGGTGSENKDTSSTATTSTGNPD
                     YDPNRGVGRFTTVDVGDHLDAAMAAEGKKVFDVKCSSCHKLTNEKLVGPGWAGVTSRH
                     QPVWIMNFATNPDEMINKDPKAQAMLEICLVRMPNQNLTDAEARSVLEFMRENDGVK"
     gene            20284..>20931
                     /locus_tag="VEV83_02570"
     CDS             20284..>20931
                     /locus_tag="VEV83_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase"
                     /protein_id="HYK44021.1"
                     /translation="MKFSPRLAAFALLVSMAAAFYSCKPKNAATAVAGNAAKAYVAPG
                     KYDEFYNFVSGGFSGQVAVYGIPSGRLLRVIPVFAADPESGYGFSEETKPMLNTSHGY
                     IPWDDQHHPELSQTNGDLDGKWLFANANNTPRVARIDLTTFRTAEIIEIPNSAGNHSS
                     PFTTDNGEYIVAGTRFSVPLDNENGDVPINTYKQNFKGTVSFIHIDPATGGMKLGF"
BASE COUNT         5961 a         4677 c         4622 g         5671 t
ORIGIN      
        1 gagttgtctt ctctttctcc aacatacttc ttacttaaag gtgcataaaa acttggccag
       61 ccggtaccgc tttcaaattt tgtttcacta ctgaacaacg gcacgccaca gcatacgcaa
      121 tagtatgttc ccttttcatg gttattccag tattccccgg taaacggccg ctccgtgcca
      181 gcttcccggc tgaccgagta ctggtccggg gtaaggatct ttttccattc gtccgctgtt
      241 ttggtcaccg caaacttttg ttgcggtggc tgcccgcacg atgctaaccc tatcccaagc
      301 aagatgataa aaattccggg agcttttttc atgttgtgtt tattgagcta ctgtaaataa
      361 cgaaaaacga tggtaaccgg tttgttaaag atttatgctg aagaaaagtt gaagataata
      421 cgtgcagcat tggcagaggc gtcgccgccg gcagaaagca tttgccttaa ttcatgataa
      481 tcctgttgaa gttgtctccg tcgttccgga tcgttaagca attgcgataa ctcatctttt
      541 aaattttcaa cagttaggtc atcctggatc aactctttta cgacaggctt attcatgatg
      601 agattgacca gcgctatgta ttttattttc accagccgtt tcgcgatctg gtaactgatg
      661 ttgccgccct tgtagcatac aacctcagga acttcaaaca aagcggtttc aagggtcgct
      721 gtgccactgg taaccaatgc agcttttgcc tgcatcaata actcgtaggt cttgtttttt
      781 actgaggaga cattggtata taaatgcatg aagccggcgt agaattcgtc gtccaaagct
      841 gaagcctttg cgaccacgaa ttggtgatca gggaatgact tacttacttc gagcatgatg
      901 ggaagctttt ttgcgatctc ctgctttctg ctgcccggca atagcgctac aatgtttgag
      961 gtttgagggt tgaggtttga ggtttgattt gcctccttga aatgatcgat cacctgtact
     1021 aaaggatgac cagtgtattc aacatcccaa tcccatttgt ttttatagta atctttttca
     1081 aatggaagga tcacgatcat cttatcgatg tactttttca tctttgggac gcggctttcc
     1141 ttccacgccc acacctgcgg cgaaatgtag aagatgattt ttgtgagagg tgacgaattg
     1201 tttcctttct cattccttct ttctaaaccc ttatttctta tctcccacat ccatttggcc
     1261 acccgcaaat tgaaaccggg ataatcgatc agaacgagca cgtccggttt gaacctcaga
     1321 acatcttctt tacaaaattt cagattgcta aggatggtct taagattcat cgcaacctcc
     1381 gcaaagccca tgaaagccag gtcgcggtag tgtttaacaa gtgtcccacc cgccgcctgc
     1441 ataagatcgc cgccccaaca acggatcccg gcgccggcat ccagtcggag taattctttt
     1501 ataagattgc tgccatgcag gtccccgctt gcttcacctg caataatgta atacttcatg
     1561 cgcttagatt cctgccgtag cggagattct taacacgcaa atttgtaatc tcacgtaaat
     1621 cttccgctaa aaagttataa aagtagtgcg agaagtctat tacttgttat agtccctttc
     1681 gacaagttcg tcatattcgg gatggcgcct gaggtaggat gagatataag gacagtatac
     1741 caaaactttt ctctgttgtt gctttgcctg ttcgaatgca aatttcgcaa gctttgcggc
     1801 aatccctttc ccttcagcct ccggcggcac ttcggtgtgc atcagcgcca gctttccatt
     1861 ttgccatcga taaacaataa cggctaagcc atcgccaacg ggcatttcaa atcgttgatc
     1921 tttttcgttg tttgatattt gcacggtcgt gtttttcatg atctctgaaa taaggattgg
     1981 cattaaacca agcaaaaacc gtgcattgaa ctgctgcttg aagttagcgc tgcaaagggc
     2041 agttcaaatc cgctgaacat aaccacgtta aatgaacagt ttgagaacga tcgcagctat
     2101 cgcgtagaca caagagataa gaaaaatacc tttcgccgtt tcatcgcgtc gtgtattgag
     2161 atacagtgtc agcagcacaa cgttggcaaa cagtgcaaac gtcgaaagac ctgacaggat
     2221 acttttgttt gaaaagatca cgtcgaaaaa agcgcccagc gaatatgtcg ggtaaaattt
     2281 ccaaaagtaa taaccgagca tgccaagaat gggcgcaata aggccgagaa tgattccgaa
     2341 caaaagagaa ttacgtttca atgcctgcgg gttaaaactt tttgcatttt agttttcagc
     2401 ttgtggttgg tgagatcgaa ctgcaccggc actacgctga tataattatt ttccaatgcc
     2461 catacgtccg tatccctgcc cgtatcaaaa ttctggaatt cgccggtaag ccaataatat
     2521 tttcttccgc tcggatcgtg gcgttcgtca aatcgttctt catatttcgc atatgcctgc
     2581 cggcagatct taagaccctt taataactcc ttttttaccg gcggaatatt tacattaagg
     2641 caaagatgtt tgtcgatctt ttttgtgagc agttgtttta ccagcaggtt agcataatag
     2701 gcagctccac taaaatcggc ctcgatgcta taatcgagca aactaaagcc aatgctggga
     2761 atgctttcga tagatgcttc cagggccgcg ctcatggttc ctgaatagat cacattaata
     2821 gagtgattag ctccgtgatt gatgccactc aaacacatgt cgggctttcg gtgcaacact
     2881 ttgtctacgg caagcttcac gcaatcaacc ggtgtgccgc tgcattgata cgcttctatt
     2941 tcaccaaaaa cctgcaccgg tgttaatcgt agcggatgac cgatagtgat cgcgtgtccc
     3001 atcccgctct gcggtttatc cggggctacg acaaccactt tcccaagctc ttttaccgct
     3061 tcaaccaatg tttgtatgcc gggagcagaa acgccatcat cgtttgtaac aaggattacg
     3121 ggtacgtctt tttttccctt actcgccttc gccatgaggt gcaatatact tcgtttgatg
     3181 tttgacgttt gaggtttgat gtttgacgtt tgaggtttga agttgggtgc tggtcatcag
     3241 ttggaggtga cagaattgcc atacgagtaa taaaaaacag ccctgaattt gtcgggctgc
     3301 tttaaaaata taaattaaag aagattctac ttatacgccg ggataattcc ttgcgctaat
     3361 tcaaccattt ggtttacccc gtcttccggt aaattgcctt tcttaaattc cgccataacg
     3421 tgcggcagct tagtttccat ttccataagg aagtgctcct cgaacgcctt cacgttctta
     3481 acggccacat cgcgcaacaa tccctgagtt ccaagataaa tgatcgccac ctgcttttca
     3541 accgggtagg gagaatattg tggctgctta aggatctcta cattacgtgt gcctttatcg
     3601 atcacaactt ttgttgcagg atcaaggtct ccaccgaatt ttgaaaaagc ttccatctca
     3661 cggaacaaag cctggtcaag ctttagtgtc ccggccactt tcttcatcga ctttatctgt
     3721 gcatttccac cgacgcggct taccgaaatg cccacgttaa ttgcgggacg gatgcccgag
     3781 ttaaaaagat tgccttcgag gaatatttgt ccgtcggtaa tggagatcac attggtagga
     3841 atatatgcgg acacgtcacc cgcctgcgtt tcaatgatcg gcaaggctgt tagggaacca
     3901 ccgcctttta ccaggtgcct gatgctatca ggcagatcgt tcatttgact tgccaccttg
     3961 tcgttggtaa tgatctttgc ggcgcgttcc aataaccggc tatgcaaata aaacacatca
     4021 ccgggatacg cttcgcggcc aggaggcctt cttaacaaca acgacacctc ccgataagca
     4081 actgcctgtt tggaaagatc gtcataaatg atcaatgcag gccgtcccgt atcgcggaag
     4141 aattcgccga ttgctgcccc ggcaaacgga gcgtagaact gttgaggtgc cggatcggat
     4201 gcagacgcag caacgatcgt ggtataagcc agcgcaccgt tgtcttgcag cgtcttcatt
     4261 acacctgcaa tcgtcgaagc tttttggccg atggcaacat aaatacaata taccggtttg
     4321 cctgcggcgt aaaattcttt ttgattaatg atcgtgtcga tgcaaatggc cgatttgcct
     4381 gtttgcctgt cgccaatcac cagttcacgt tgtccgcggc caattgggat catcgcatcg
     4441 atagccttga tacctgtttg caatggttcc ttcactggct cacggaaaat aactccgggc
     4501 gccttacgtt ccaatggcat ttcaaacaat tcacccgcga tcgggccttt gccgtcgata
     4561 ggctcgccga gtgtgttgat gacacgacca accaaaccat tgccgacttt aattgatgcg
     4621 ataaggccag tgcgttttac gttagctcct tcctttatgc ctgcggtttc tcccatcatc
     4681 actacgccca cgttatcttc ttcaagattg agcgcgatcg ccctgacgcc actttcaaat
     4741 tcgacaagct cgcctgcctg cacgttgttc aacccgtaca cgcgcgcgat gccatcgcct
     4801 atctgcaaca ccgttccaac ttcttccagt tgggcggcag ttttgaaatc ggtcagctgt
     4861 tcgcgcagaa tagcagatat ttcatcgggc ttgatcccta ccataatatg ttgtttatac
     4921 tgttatttgt gaaattgtgt ttagcgaatt ctttgtacat acaaattttc aagaaactgc
     4981 ctgccgatat attgtaaatc atttttgagg ctcgcgtcaa ataagatgtc gtgacttttt
     5041 gcaataaatc cgcccaatat actatcgtca actttggatc ttatctcaac cgtcttgtgt
     5101 ctgaaccttt ccaaactttg aaaacggagc cgcagatcat tctttatttt gtctgagatc
     5161 tcaacggccg ttgttatttc gatgatctct atccctttta attcgcgata tttttcaatg
     5221 aattcgtcgg ctatttccgg cagcaacagt tcacgccttt ttgaaaaaac aaggtcaaaa
     5281 aatgaacagg tgagaggttt cagccgttct ttaaaaattg cacggaagat ctcgattttc
     5341 ttcgagtccg aaattaccga tgatgacagc gccatccgca ggtcaggggt gagcgtggcg
     5401 cgaatgaaat caatatccgc cttcacctct tccacctggt tagtttgaac agccaggtcc
     5461 ataagtgctt ttgtataacg ctgcgcgatt aacttgtttc gcataaacgg tcccgggatt
     5521 aatttcttcc tctgctatcc gtgtttgtaa gatcatcggc cagtttcaaa atgtactctt
     5581 cgtgatcctc tttgtttacc aattccttcc ggatgagttt ttccgtcact tcaatcacca
     5641 ttttgccgat catatttttg acatcaacga tcgcggcatt tttttgttgc tcgatggcgc
     5701 tttgcgcatc ggtaacaata cgatcatatt ccgtttttgc tttgtctttt gcgtcggcaa
     5761 tcatcttatc gctggcatcc ttcgcttctt taagaatggt agcgcgttcg ctgcgtgctt
     5821 ttgcgagcac ggcttcgttc tcatttttga actgcgccat ctctgccttt attctttcgg
     5881 cagttgccag ggaatcagct ataacctgtt cgcgtttgct cagcccattg ataatagcag
     5941 gccaggcata tttttttaaa atgaaaaaca cgaccaaaaa cgcaatcagc gtccatatga
     6001 tcaaacccaa cgctggtgta agtaattgca taaaaacaag cctccatcct ccgccgcacg
     6061 cggaagtgtt tagaaactaa tcgaatcttt ttaagcgatt catataataa tagactacac
     6121 agttacacat tcattcaacc gccaaccgtt ccttaaatca aaaataattt aagacccggc
     6181 ttatatgaac atagccaaaa taccaacgat aactccgaac aaggcaacac cttctacaag
     6241 tgctgcagtg aggatcatgt tggcacgtat atcgttcgac gcttcaggct ggcgggcaat
     6301 cgcttctact gcgcccctac caatctggcc aataccgata cctgcgccaa tagcggctaa
     6361 acctgcgcct atagcaccgc cggcattagc caggtcagcc aacaaaacaa cattcagtaa
     6421 atccataatt ctgcttttat aaatgattaa aaatttaagc aacgactgca atatcttcag
     6481 gatggccctc atgttcatgg ccacccgcaa acgcttctcc gataaataca gctgtcaggt
     6541 tcgtaaatat ataagcttgc aaaaacgcaa ttaatatctc tatcaggtaa ataaatatca
     6601 cgaatgcgac agacaagggc gaaaagcccc aacccgcagc ggtgctcagt gcgccgaaaa
     6661 taaagatcag cgagatgagc gagataatga tgatgtgtcc cgcgatcatg ttcgcgaaaa
     6721 gacgaatcat gagagcaaac ggttttgtga atacgcccag cagatcaacg atcagtaaga
     6781 tcggtttgat accggttgga accggtggat taaaaatatg tccccaaaaa tgtttgttcg
     6841 agcttgctaa gatcacaatg aaagaaatac acgcaagcac aaacgtgaac gcaatattcc
     6901 cggtcacgtt agcggtgcct ggaataagcc cgaccaaatt attgataaga atgaagaaaa
     6961 aaacggttaa caagtaagga agatatttct ggtatctgct tccaagattg ggctttgcca
     7021 catcgttggc gacaaaaagg ataaccggct cgagcaaact ttgtcttcct ttcggggcgg
     7081 atgttacacc ctgtccgctg ctataacgtt tggctatcga gatcatgatc cacacgagca
     7141 gggccaatgc gatgatcatc tgcacaacat tgcgcgtgag agacaggtca tacaccttta
     7201 cgctttcatc aatttgacca ttgccattca ctgcaacgat ctgcccgtcg ttatacttct
     7261 ttgggtcgag attttcttcc ttgatctttt cagcattcaa aaccgcgtac ccgttgtacg
     7321 tttcctcgcc gtgatggaac ctggaaaaat taaaagcgga gaatcctttt tgaggtgaat
     7381 ataagatcac cgggagtgga atagcggcat catgctcagt gccgtcagcg cccttatatg
     7441 agaaaaagtg aaactcgtga gcgtcgagaa cgtgaccgaa aataacctcg ttcgcatcaa
     7501 atcccttctt ttcctctttt tgcgtgtctt ctgctgtttc aggcagttga ccttgagcaa
     7561 aaaccggaat agaaaaaaag agtaagaaaa cactgaaacc aagagccagt aaaggtttca
     7621 ccatcctgat ggtcataatc ggcctttaaa tttgcggcaa agataagcgt acaccgctaa
     7681 ataatgaaac gagatcgaaa acttaattgt cgcattcaga taattaaatt tttacagctt
     7741 gcgtcatgcg ttttcactca taattctaca tgcttcgact gtacttcgcg accataaaaa
     7801 atggttgcat ggctgtcaaa atcctcattt gaatctgtcg tacagaaatt agcagtactg
     7861 cttttttcca gttggttttc aatttcagga tggcgatgca aataatcttc caggctcgcg
     7921 gcaacgatct cgccctgcgc tactaccgaa atgtgcggct gcaaaaattt ttcgatcctt
     7981 tgtttgatta gcggataatg tgtgcaggcg agtaaaactg tgtcgatgtt ctcatctttc
     8041 gctaataact cgccaagata ttttcgaatg aaaaaatctg cgccctcatt ttcaaagtcg
     8101 ttgttttcaa ttaatggaac gagcatcggg cacgcttgct gtaccacggc gagctggggg
     8161 aagaactttt cgatctcgat gatgtaagac ccggattgca ccgatccggt tgttgcgaga
     8221 atgcccacat gcccggtcgt ggaataattt ccaatggtct ctgtagtagg tcgtatcacg
     8281 ccgagcaccc gcttttccgg aaaatttttt gccaattgat tttgctgaat actgcgcagt
     8341 gccttcgctg aagccgtatt acaagcaagg atgaccagcg ggcacctttg tttgaaaaac
     8401 cactgcacac actgccaggt ataatgatat actgtttcga atgaccggtt gccatagggg
     8461 gtgcgggcgt tatcaccgag atagagataa ttatatgcag gtaatttttt ttggatctct
     8521 ttgagaacgg tgaggccacc ataacctgaa tcaaaaacgc cgatcggtcc ctgttgcatg
     8581 cgtcaaaata aataaataaa acctataaca atagtaagag gcctttcgtt taccctttta
     8641 taatgcattt gtaaaattaa cgggcagcct taggaaaatt cgctttgata atatctttgt
     8701 gtatgcggaa aattttttgt gtgtgcctgc tgtttttctt cctcgcaaag ctaactgacg
     8761 gtcaaccttc cgcatttaat tctacttcaa gatcattcga ccgggcaaca tcgatcagca
     8821 cttcgccgaa atatgaattc agggcagttt ggatagctac ggtaatgaac atcgactggc
     8881 cggcaaacaa gacttcgggc acaaatgagc aaaagcagga atttattgat attttggatc
     8941 agcagcagaa gctcggcatg aatgcggtga tcgtgcagat aaggccgtcg gcggacgcgt
     9001 tctatgcatc aagctacgaa ccatggagcg aatttctaac gggtaagcaa ggcgtcgctc
     9061 cttcgccata ttatgatccg ctcgctttta tggtacagga aacgcataaa cgcggcatgg
     9121 aatttcatgc atggataaac ccttatcgcg cagtgttcaa tgtgtcttcg ccggtctctt
     9181 caaatcatat tactaaacaa catcccgact ggtttgtaaa atacggcgat aaaaaatatt
     9241 ttaatcccgg tattccggct gtaatgcaat atctcacgca ggtggtgaaa gatattgtga
     9301 cacgatatga cattgatggc atccacatgg acgattattt ttatccatac aggatcgccg
     9361 gcaaagagtt tcccgatcgt caaacctatt tgaaatatgg cggcagcatg agccgcgata
     9421 aatggcgccg gagtaactgc gacagcgtgg ttaaaatgat acacgacgtt attctcgaat
     9481 ataaaccact gatcaaattt ggagtaagcc cgtttggggt ttggcgcaac agttctgctg
     9541 atccgaaagg cagcgaaaca caggctggcc aaacatgtta tgatgatctg tatgcagaca
     9601 tcctgctctg gttaaaagaa ggctgggtcg attacatcgc tccgcagttg tactgggaaa
     9661 tcggcaacag gctatgcgat tacgagacgc tgttggattg gtggtcatct aacagttatg
     9721 gcaaacaggt ttatatcggc cacggagtgt atcgggcgat agaaagacca accgcggcct
     9781 ggcgtaatcc aaacgaactg cccaacgaaa taagattgtt gcgtgctgat gacaacgtac
     9841 agggaagcgt gtactatagc agcagcagcg tgctgtcgaa cataaatggt tgggccgaca
     9901 gcctgcggtt taattactat cgcatgcccg cactcattcc gcccatgaac tggatcgata
     9961 ccacagctcc gaaacaacct cacatctcga agatcgacat cgaaccggat aaaggcgggc
    10021 aagcgtttac tattagcggc aacggcatca acaaaaagga gactgagtcc atcaaaactt
    10081 ttgcattata tctttctccc tcgctggttg gattaaccga ccatccggcg gcaattattc
    10141 ctgcggataa gtcgctgaaa ttcgattttt cctttttgtc gactctaata ccgaaagatt
    10201 ggaagaaatg ctatttcact gttacgagtg ttgaccgtga gaataatgaa agcgatccgg
    10261 gcaacgtgat catgcttgaa aaagatgatt tcaactggga agtgaaacag aaataaagtc
    10321 tattttcatc gaaaataatc gggcatgcaa ttgcaaaaca tttttgtaca tcatgtattt
    10381 ttttatttga aacaacacga tgcggccaac gttgcggcac ttgttcaggg tttacagaaa
    10441 ttatcttccg catcaacgat caggcagttt catataggcg ttcccgccga aacttatcgt
    10501 gatgttgtag aacggtcata cggagtttca tggcttgtat tctttgataa tcctgccgac
    10561 caggagagct accaaacaga cccggttcac cttcagttta ttcgggaatg ctcacacttg
    10621 tggaataaag ttgttgtgta tgattcggtt aatgcttaat caatggtatg agaaaaataa
    10681 tctttgctgt tttctttatt tgttgtttta tgtatcgctc ccttgaacaa ccgaccattg
    10741 ccctgtataa cggccacgta ccaaacagta agccctatag cacgaaagaa ttttgggaac
    10801 cgcaagacaa tggagacacc attgttcatt tcatttcgga gccgacactc acaatttttt
    10861 tgcccgacag ggaaaaggcc aatggtacgg cagtaataat ttgccccggt ggcggctact
    10921 ggatcaactc gatcgtaaaa gaaggatacg ctgttgccag ggagttcaat caatgggggg
    10981 tggccgcatt tgttttgaaa tatcgcattc cgaatgattc ttcaatggtg gataaaaaga
    11041 tcgggccgtt gcaggacgca caacgtgcgc ttcaactggt gcgcatgcat gcgaaggaat
    11101 ggaatgtgga tgtgaagaag gtgggcatca tgggtttttc tgcaggcggt catctcgctt
    11161 ccaccgctgc gactcatttc acaggcagcg ttatcgaaaa tgggaacaac gtagatcttc
    11221 gccccgattt tgccatattg atttacccgg ttatcagctt tcaatcaaac atcggacacc
    11281 ttgggtcacg cgatcaactg atcggaaaca acgcgaggca agatttaatt gatagtttct
    11341 ccaatgagtt acgcgtgacg cgacaaacac cgcccacttt tctcgtgcat gctacagatg
    11401 acgatgcagt gcctgtgatg aacagcattg ccttttatga agctttgttg aaatacaaga
    11461 tcccggctga gctccacatc tataaagcgg gcgggcatgg gttcggcatg cataatccca
    11521 ccacacaaga tgaatggatg gacaggtgca ggaattggat gcaaagtatg ggctggatag
    11581 gaaaatgatg ttatacctcg cagtttgccg cgtgttcctg aagcgaccac accgcagatg
    11641 tggttccttg aacgcaggca caggtgacca ggaatatctt catgactgat ccggatcatg
    11701 tttttcagaa ttcatcgctt gcagttttgc gtcataaatt tcaagtgtat gcaaaaagcg
    11761 atcttatccg gcgctgctcc ttcgtcaatt ttttcttctg aatatattgc aagaacgcac
    11821 gcaggcccag gcatcctaaa aaaattcttt agctggtgcg ctacacagga tgataacaag
    11881 tttatgtggc ttgcgatcag ttttttcggc ttaataggca tggtacttcc gataacagcc
    11941 atggcaattt tgttcgcggg tggcaatagc cttgcgttgt ggatcattgc gtgcgctttt
    12001 aatgtgcccg tgctcatatt gaacctggca gcgcaaccgt caaaaatagt gttatcagct
    12061 ttgacgctcg cagttcttgt cgatgtgtgc gttattgctg tctccctcgt tgtgtttgca
    12121 atctaagacg ctttggtaag tcatgaaaaa atttattggc atttttttga tcagcatatt
    12181 cgcggcttgc gtcgctactt caaagtttga gccgacggct gctgagttac ccgctttgca
    12241 agcgaaggtg cctggcttaa cttatgagga tgctatgcag ggttataaat tatacacatc
    12301 acattgcagc aattgtcacc gtctccacaa tccaaacgaa ttcaccgcaa caaagtggaa
    12361 taaagtgctg ccagaaatgt ttggcaaggc gaagctctcg gatggcaatc aacagcaata
    12421 cgtgagagat tacctggaat caaaagcaaa ataagagtcg aaaacggtgt gcggcgaatg
    12481 cgtcttctct cttttcattt aaaaatataa tctgccgcct aagccggaaa aatcaaacaa
    12541 gatatgagac acggtagtca ggaagattga ccttgtatct ttaaccacga tgctgtacaa
    12601 cagccccaac gcaaacgaca cggcgacaaa tgaaaaagct cctcccggat gtggattgcg
    12661 aaacacgatc tgcggcgcta agtgccagat tgcaaatcct aaagacgaaa caagtacgta
    12721 caatctggaa ttctcgccca tgatcttcaa aaatgtcccc cgccataaaa tctcttcaaa
    12781 agttccattc acaacagcaa gtaccgcgga tgaaacgatg acactttgat ttgcattgcc
    12841 aatcactttc gggaattcat aacagtaaac aactaccagc ggaaaaacaa ggaatgcaat
    12901 gttccgcagt ttcttttttc cgagtgcagg tccgcgagtt ttgtataatt cgataactcc
    12961 gcgggcacca atcatcagaa gcggaatagt tacgcaccaa acgatccagt aaaaaagaaa
    13021 tccaaaaaaa taaccgcgtt tctttccaaa ccactcacta aagaaataaa atgcagcggc
    13081 agtcgtaagt aacaagacaa gcggaagtaa ataaatgaac gtttttcgcc atgatgtcat
    13141 cacgcaatgt tgatcctgtt tttctggtgg ctgatttttg gatgatctga tcgcgccagc
    13201 attgcaccac aaaatatcaa taacaaagcg atgatcgcaa aaacaagctg cagatacgaa
    13261 ctaaaatccg tcatcatact ttgcacgaat atccagccgg ccaaaataca tccctgcatc
    13321 aggatgagta ctgcatagcg tttggaatct aaaagaattg tgacgcacac gaacacgctc
    13381 gataatccat ttaaactaaa caggatcagc ccgggtataa agtaattttc aaatggtgaa
    13441 tgttgcagat gatcgagtgg tagttgcagg ctattcccat tcgggtacac tagcaggttc
    13501 aacccgccgt acaatgcact catgccgtta aaagctaaga gaatgccggc caatatcttt
    13561 aagaacactt tcatacactc gctggtttaa cgtgcatttg actattgtat tgtttgaaat
    13621 gccagatgaa gtcatgatca tattttttca ggagaatatg gaaagcgatc gccatcgata
    13681 cagttgatgg aaacgctgat cctactccga gcggcgcaat agcaagtccg aaaataatgc
    13741 cgcctacgca tgcgagttct gtaaggcgtt tattgagcac catcccggcg aatatcaaaa
    13801 attgtcctgc ggctatcgtg caaacgaacg gcgttatgtg ccgggaaaag aaaccattga
    13861 tgaaattggt gtaagcgggc agcgggtcaa gtcttgcata atcgagataa atttcaggtg
    13921 agtttagcgc tgacgtggag ttaaagtaac tggcccataa aaagaacccg ccgagaaata
    13981 ttcttgccag catcggcttt ttaagggcag aaagtatcgt taacccgaat acaatatttg
    14041 aaataatata aggccaaagc cattctttaa gtgcttccat aaccagggac tgcaattttt
    14101 ctttttctca tttcctccaa aacttttgca ggaatatcag tgcggcaatt acaatttttc
    14161 acatgctcaa ggtgccactc aattcgttga tctgtcgtcg cattcttcgg catgcggtga
    14221 gccaaatgcc atgctttgtt gattttcatt gccggtctca atttagcagg ctgcacaacg
    14281 atcttacgat gcggcatacg aaccgcaatg cgcaccactg tcgactgcca caaaaggcga
    14341 cctgttaaac aacaaacctg tttttcatct acatggttgc ttagctgtcc aggtaaatca
    14401 acagcgatct gcattagttg aacgaagcga ccgtttcaat acaatcagca actgcaaccg
    14461 gcgctgtacc tcatttcagg atgattgttt aagtaagccg tgaccgccta agttcgttat
    14521 tggtgaaatt ctaaaaaatg agtttaatca tcggctggta tgacgtaaat cagttttaat
    14581 gcctcatctc aaattagttt cgcatgtcaa cgcgctcagc ggattgcatt tttattttca
    14641 cacgtcaaac gtatcggcag atgccaaaaa ccggtgactc aaattatata aacaacgaag
    14701 agcaactaaa ggcgttgttt aattacgcaa ctattggcat cattgtaaca gactcacgcg
    14761 gcacaatcgt aaacttcaac aaacaagcgg aagcaatatt tggctatctg aaagaagaag
    14821 tggtcggaaa aactgttgaa ttactgatac ctgccgatct tcggaaggca cacgaacatc
    14881 accgcgaaga cttttaccag cagccatcgc ctcggaacat ggggcatggc cgggaccttt
    14941 ttggacagag gaaagatggt agcgaatttc ctgttgaagt gagcctgagc aattacacgc
    15001 tagaaaacga attatttata atagcttttg tgatcgatat aacgacgcgc aagcaacacg
    15061 aggcagttgt gctccaacaa aaaaaggagc tcgagacgat cacgacacag gttaagcaat
    15121 taaacaggga cctggaaaaa aagatccagg acagaacaaa aatgttgcgc gaaacacttt
    15181 cagcgcttga agcctcaaag gaagacctga gtgcagcgct gaaaaatgaa aaagaattgg
    15241 gcgaattaaa atcaagattt gtgacgatgg catcccatga atttaaaacg ccgcttagca
    15301 cgatcttgtc ttcagcgttt ttgcttgaaa agtataataa tacccctgat gccgtcgaca
    15361 aaagattgaa gcatactgag cgaataaaga atgcagttgc cgatatgaaa aatatcctcg
    15421 acgattttct ttcactcggc aagctcgaag agggcttaat aagagccaac atggccacta
    15481 taccggccga agtatgcttt aacgaggtag acaatgcgat cgtagagatg gagacgaatc
    15541 ttaaaaaggg acaacgcata gacttcattc gtaacggtga cggacaggtt atgatcgaca
    15601 agcatcttct aaagaatatc gtgatcaacc tgctgtcaaa tgctattaag ttctcgccgg
    15661 aaaacagttt gatagagatc aattgttcaa cttataacag cacctttgcg ctttctgtaa
    15721 aagacgtggg catcggtatt tcagcggaag ataaagaaca tttgtttgag cgttttttca
    15781 gggcaaagaa tgcgatcaat atccagggca ccggccttgg gctacacatc attgccaaat
    15841 atcttgaact gatgcgcggc agcattgaac tggagagcac gttaaacgaa ggatcaatat
    15901 ttaccattca cattccaaaa aaaagaaaac atgcaagcga acaaaaaaat attggtaatt
    15961 gaagataatc cggaggtgag ggagaacatt gctgaaatac ttgagctttc gaactacgaa
    16021 gttcgtactg cagaaaacgg aaaagaaggc gtggagactg cattgcaggc aacgcctgat
    16081 ctgatcattt gcgatatcat gatgcccgag ctggatggat atggcgtatt gcatcttttg
    16141 agtaagcata ttgagacgta cggagttcct tttatttttc ttactgctaa atcggaaaaa
    16201 tctgatttga gaaaaggcat ggaactcggg gcggacgatt atataacgaa gccattcgac
    16261 gggatcgagt tattaaaagc gatcgagatc aggttgcaaa aagcagaggc ggttaagaaa
    16321 cactttgagt cgtcgcacac cgggaacatt gacgcattca taaacgacgc gggcaaactg
    16381 ggaagggtgc aactcacatc agatgagaga gaggtgtatg actataaaaa gaaacaattg
    16441 ctgtatgcag aaggccagcg cccaaaggcg gtgtattata tcaaaaaagg aaaggtaaaa
    16501 gtttataaaa cgaacgaaga aggtaaggaa ctgataacaa atatttttgc caccggagat
    16561 tttctcgggt acacatatat actggaggag atgaattaca aagagaatgc agagatcttg
    16621 gaagacgccg agatcatgaa gatcccgaag gacgatttcg tttcacttat tacaaacgac
    16681 acgcagatcg cgcgacagtt cataaagatc atcacgcata acgttatcga aaaggaagag
    16741 agtcttttga atttggcgta cagctctttg cggagaaagg tggcgtttca actgctgcac
    16801 attttagaaa agttcaggaa taatgacaat aacaaaaatg aactgaggat ctcgcgcgag
    16861 aacctggcgc agattgccgg gatcgccaca gaatctttga tcaggacctt atccgatttc
    16921 aaggcggaaa aattaataga tatacagagt gggactatcg tgatattgaa tgaagataaa
    16981 cttagaaatc ttccatactg attgcggcca gcagtggtta aatgccacga gttatttctt
    17041 ctccttccag gttttgctgt tgcagcgtcc aatcgttcgt taaagaagtt tcgatccaaa
    17101 cgttaccgga tttacggaat acttcggcga acaacccgag tgattcaaaa tctttttcca
    17161 catcctttac agttctgttc tggctgatgt caatgccttt acggctgttc agttttgcca
    17221 gctgaagtaa agcggtgtga gatgatatgg cttctttttt taaggaatga ttatttgtcc
    17281 tcagcggttt tttatagaac tcaattttta agaaagggta gaatgctgaa aaaacttttt
    17341 tgatcccttc gatttgactc tccttctcca gaaataattt catggtcgtt ctttttacag
    17401 tataaatttt gtttaccgct ttaatattat tgatggctac tccttgtgta acgccataac
    17461 cggaaccggt gagtagaaga taaattgcct ggagtcgctt ttatgaaaga gaccatgttt
    17521 cttaggcacg actaaaacaa ggtccgcgtc gttttgctcg gcaaataggg aaattccctt
    17581 ttgcacgttc ggattttcta caacgtggaa atacgggtct gccgttttga gcggatgctg
    17641 cgaaaacaga tccttcaata aattttcgcc gatctcttta tctgttttat ttacgtggac
    17701 gatgtgcagg gatgcgccaa aaatgttcag taagctggtg acctgctgcc acggaagatc
    17761 gtccaggttt ttcaattcag ttgccagcac aatttttttg atgggtttaa aactcctgtc
    17821 ctgcggcacg acgatcaccg ggtaattaag atgctttgcc acataaaccg tcgtgctttc
    17881 caggaaatac cgtgcagcca atgcgttgcc gtgtgtgccc ataacgatcg cgaatggctt
    17941 attgtacgcg cataatttta cgagttcatt ttccagggaa ccccataatt gtttggcctc
    18001 gatggatatt ttatcattcg tatgctcaag caaatttttt ctaaccctga gcaattcatt
    18061 ttctgaacta agctcatcat aactcacgcc tgcgacaggc atatcgccaa cagcagccgg
    18121 cacttccact gcgtgcagca gcaggagctt tgcatgtatt gctactgcaa gatccgccgc
    18181 ataccgcacg gcattcagcg aaacctctga aaaatcggtg ggtgccagta tcgttttcat
    18241 gtgaggaaat tttaaaagtt aattcaaaag taacggaagc cgcaagaggt taaaatgact
    18301 ccaatcaaaa caaaggatga ttgttgtcaa taaagagcag agccctggag gatcacggtc
    18361 agacggtttt gggcgcaaat tttttgccag caacatttaa aattaaaagt ccgctgaaca
    18421 ttacaattgc cgcaaacaat aatacctcat tcacgtatgg aatagctgta taagtgatgg
    18481 cgccaagtcc ttctacaagc agcaacaatt cgttgaagat aaatcctgcg ataaatattg
    18541 acatgccgcg aactgcattc ttgttgtgcg gcaagtagcc ttcgtacatc gcatacccaa
    18601 gaataaaaag tgttatgacg cccaatagta tcaagtgcag atagccgatg atgattggcc
    18661 gaaagccgta agcccacgtg cttagcgcag gaattgtcga gccggcctga agaaataatt
    18721 ttattgtcag tgcgatagcc gacaaacacc aggtatataa tgcaagcgtc ggcgccttac
    18781 taaaaattaa ttttcttttt ttcatgatcg cagtcaacaa aatggttccc gctaaaaatt
    18841 gggtgagcgc ggcggcaaca acgagcatgt aaacccacaa gggcaatggt aaccacaaag
    18901 ccgataagaa atatgtgggc acacatgcaa acaaaaacgc gtaaaaaaca tttcgctgca
    18961 attttttaga gaccaattgt tcatccagct tactggcaaa cagccccatg caggcaaata
    19021 agaaccaacc attatattga aaatgaagaa agaaatatat agctgccaaa taccagtttg
    19081 ggtgcaaaat tttgttcgcc atcataatgg ccaacgcaaa agcacctaga gatgacaacg
    19141 cgttaaaaac aaaggatgct ttaaaccagt ggtgaactat tttgttgcgg cctattttgt
    19201 tcagatcagt ccatgcaaca ataagaaaag cataagaggc aaagatcgat aaagtcgaaa
    19261 agatgatgga gacggtcgca tagccggtga tagggaagct cagcagcatg ccatatgcgg
    19321 taaacaaatt agcgatcaac aaatattgat attttttcca ttggaaacgc tgcaagtgca
    19381 ttcgaatgta agccgtgata aagatcatta gtgcctgtga tacccagcca gcgaatgcaa
    19441 aatgtgaatg tgcattcaga agaaattttt ggttgacaaa cggaagcgaa aaaacaattt
    19501 tataacgcag gatgatacca agcaatgcga ccagcagcag gttgaagatc gctatcctga
    19561 accacttttg aaaatgctcg ggttccacac atttttccat cgggcaaaga aaaaatagaa
    19621 gttacctgca atccatgatc gtcgtcatta tttcgttttg ccatggggaa caatgtgaac
    19681 gattcgggtg aaagtcatag catgatatga ttgtggtcat gcgccacctt ttatgatgca
    19741 tctaatttgc ggcccttcat tcatactaaa tatgcgatat gaaaaaatcc attctaattg
    19801 ttgttgcgat gtttatttct tccctgctga tattttcatg cggcggaggt accggttccg
    19861 aaaataaaga cacctcttca acagctacaa cttcaaccgg aaatcccgat tatgacccca
    19921 accgtggtgt gggaagattt acaactgtgg atgtaggtga tcatttagat gcggctatgg
    19981 ccgcagaggg caaaaaagtt tttgatgtta aatgctcctc gtgtcataag ctcaccaacg
    20041 aaaagttggt cggcccgggg tgggctggag tcacatcgag acatcagccg gtatggataa
    20101 tgaattttgc gacgaacccc gacgaaatga tcaataaaga cccgaaggca caggcaatgc
    20161 ttgaaatatg tcttgtgcgt atgccgaatc aaaatctcac tgatgccgaa gcgcgcagtg
    20221 tgctggagtt tatgcgcgaa aatgacggcg taaaataaaa gtaataccac caaaatataa
    20281 gatatgaaat tctctcccag gcttgcagct tttgctttac tggtttcaat ggcagcagct
    20341 ttctattcgt gtaaaccaaa aaatgcggct actgccgttg cgggaaacgc ggccaaagcg
    20401 tacgtagctc cgggcaagta cgacgagttt tacaattttg tctccggagg tttcagcggg
    20461 caggtagctg tatacggaat tccttcaggg cgacttctgc gtgtgatccc ggtttttgct
    20521 gcggatccgg aatccggtta tggttttagt gaagaaacca aacccatgtt gaatacttcg
    20581 catggatata ttccctggga cgatcagcac catcctgaac tatctcaaac aaacggtgat
    20641 cttgatggta aatggttatt tgcaaacgct aataatacac cgcgtgtcgc aagaatcgat
    20701 ctaacaacct ttcgaacggc cgaaatcatt gaaataccaa acagtgctgg caaccactcc
    20761 tcaccattta ctacagataa cggcgagtat attgtagctg gtacacggtt cagcgttcca
    20821 ttggataatg aaaacggcga tgtgcctatt aatacttaca agcaaaattt caagggaaca
    20881 gtaagtttca tccatattga tccggcgacg ggaggtatga aacttggctt c
//
LOCUS       DASQJI010000078         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_927001,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000078 DASQJI010000000
VERSION     DASQJI010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927001"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2025
                     /locus_tag="VEV83_02575"
     CDS             <1..2025
                     /locus_tag="VEV83_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HYK44022.1"
                     /translation="AYPLDESELPLVLPNMEDIKPGKDGEGPLSNLKDWVEVAGKDLT
                     PNPSPLNPSPSPRVEKDGSVHQDSKNQAAEPKGAANVPKYSVYSPTQYEFAKQNRKGY
                     TEAEKILWDQLRDSKLGVKFRRQHPIDAYITDFISLQNRLVIEVDGGYHETEEQKKYD
                     ADRTNVLEKIGFTVIRFSNEEILENVFAVTKKIRQILSNLKSFPNKESLPESIPLSTR
                     GEGQGVRETSTMPGYAGSSWYFLRYMDPHNDEEFCSRQASDYWGQVDLYIGGTEHAVG
                     HLLYSRMWTKFLYDMGLIGHDEPYKHLVNQGMIQGSSRFAYRISISSFGTISEVQDVD
                     VSALYKRQVFISKNLYDTFRDNSTQELIKEFLSGEYKNFTATVDDLEPPTPIHVDVNI
                     VDGVELDMDAFRKWKSEYKDAIFICEDGSINEPLSLAEGQGARSNQKYICGVEVEKMS
                     KSKFNTVNPDDLVEKYGADTFRMYEMFLGPVEQSKPWDTKGIEGVHRFLRKLWRLFFD
                     DQKGKIWTEAPANETELKTLHKAIKKIEEDTERFSFNTGVSAFMVCVNELTDLKCSKK
                     EILEPLLTLLAPYAPHICEELWHALGRSDTILDAAYPKLEEKYLVESVKEYPISVNGK
                     LRTTMNISLDASQKEVENLVLENGVVQKWLQGNSPKKIIYVKGRMVNVVL"
     gene            2057..>2521
                     /locus_tag="VEV83_02580"
     CDS             2057..>2521
                     /locus_tag="VEV83_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44023.1"
                     /translation="MKNSLLFTSILSACFLFGCTLTVKTDNDAAGSTAKIRNGIEIHE
                     NGLHAQQAFLTLEDGSLLADNNKVQVGQKVVMRLIIDGWQEENGSIFPEASEKITTDD
                     GEVLVDEPALFEQSLPNGTPSENKEKLTLSAVINQLDKLHDYYLVSFKMWDKK"
BASE COUNT          800 a          539 c          582 g          600 t
ORIGIN      
        1 gcttacccac ttgatgaaag tgaattgcca ctcgtgctgc caaacatgga agatattaaa
       61 cccggcaagg atggtgaagg accgctgagt aatttgaagg actgggttga agtcgcaggc
      121 aaagacctca ccccaaaccc ctctcccctc aaccccagcc cttctccacg ggtggagaag
      181 gatggctctg tgcatcagga ttcgaagaat caggcagcgg aaccaaaagg tgccgccaac
      241 gttccaaaat attcggttta tagtccaaca caatacgagt tcgcaaaaca aaatagaaag
      301 gggtataccg aagcggaaaa aatcttatgg gatcaattgc gagacagcaa gcttggagta
      361 aaatttcgaa gacagcatcc aatagatgct tacatcactg attttatttc attgcaaaac
      421 cgtttggtca tcgaagtcga tggcggatat catgaaaccg aagagcagaa aaaatacgac
      481 gccgacagaa ctaatgtgtt agagaagatt ggttttactg tgatacgttt ttcaaatgag
      541 gaaatattag aaaatgtctt tgcggttaca aaaaaaatac gccaaattct ctctaacctc
      601 aaaagctttc cgaacaaaga atcgctgccc gaatcaattc ccctctccac tcgtggagag
      661 gggcaagggg tgagggaaac gtccaccatg cccggctacg ccggctcttc ctggtacttt
      721 cttcgctaca tggacccgca caacgacgaa gaattttgca gcaggcaggc gagcgattac
      781 tggggacagg ttgatcttta tattggaggc actgagcatg cggttggtca tctgctttat
      841 agccgcatgt ggacgaaatt tttgtatgac atgggtttga tcggtcatga tgaaccatac
      901 aaacacttgg tgaaccaggg aatgatacaa gggagttcaa ggtttgcgta tagaattagt
      961 atatcaagtt tcggaacaat ttcagaagtt caagatgttg acgtcagtgc gctgtataag
     1021 cggcaggttt ttatttctaa aaatttatac gacaccttca gagataactc gacacaagag
     1081 ttaattaaag aatttttatc aggagaatac aaaaatttta cagcaaccgt tgatgatttg
     1141 gaacctccaa caccaattca tgtcgatgta aacattgttg acggtgttga attagacatg
     1201 gatgcgtttc gcaagtggaa atccgaatat aaagacgcga tctttatttg cgaagacggt
     1261 tccattaatg aacccctctc cctcgcagag ggtcaggggg cgaggtcgaa ccaaaaatac
     1321 atctgcggag ttgaagttga aaaaatgtcc aaatcaaagt tcaacactgt caaccctgac
     1381 gacctcgtag agaaatatgg cgcagatact ttccgcatgt atgaaatgtt tctcgggcct
     1441 gttgaacaaa gcaaaccgtg ggatacaaag ggcattgaag gagtccatcg ttttctccgc
     1501 aaattgtggc gcttgttttt tgacgaccaa aaaggaaaaa tatggacgga agcacccgca
     1561 aacgaaacgg aattaaaaac gctccataaa gcgatcaaga aaattgaaga agatacggaa
     1621 cgtttttctt tcaatacagg cgtctccgca ttcatggttt gtgtgaacga gctgactgat
     1681 cttaaatgca gcaagaaaga gatcctcgag ccattgctta ccctgcttgc accatacgct
     1741 ccccacatat gcgaagaatt gtggcatgcc ctgggaagaa gtgatacgat cctcgatgca
     1801 gcctatccaa agcttgaaga aaaatatctt gtggaatcgg taaaggaata cccgatcagc
     1861 gtaaacggca aactgcgcac gacgatgaac atctcactcg acgcttcgca aaaagaagtc
     1921 gagaacctgg tattggagaa tggcgtggtt caaaaatggc tgcaaggcaa tagcccaaaa
     1981 aaaataattt atgtaaaagg caggatggta aatgtggttc tataagtctt atatttattc
     2041 atcataacaa tcatgtatga aaaactccct gcttttcacg agcatcctat cggcttgttt
     2101 cttattcggc tgtactttaa cagtaaaaac cgacaacgat gccgcaggct caacggccaa
     2161 gatcaggaac ggcattgaga tccacgagaa cggcctgcat gcgcaacagg catttttgac
     2221 gctggaagat ggttcgctgc tcgccgacaa taataaggtg caggttggtc agaaagttgt
     2281 aatgcgcctg atcatcgacg gatggcagga agaaaacgga tccattttcc ccgaagcttc
     2341 ggaaaagatc accaccgatg atggcgaagt gctggttgac gagcctgccc tattcgaaca
     2401 atcgctgcca aacggaactc cttctgaaaa taaagaaaaa cttaccttat cagcggtaat
     2461 aaaccagctc gataaattac acgactacta cctggtatcg ttcaaaatgt gggacaaaaa
     2521 a
//
LOCUS       DASQJI010000079         1625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_312692,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000079 DASQJI010000000
VERSION     DASQJI010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312692"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VEV83_02585"
     CDS             complement(<1..701)
                     /locus_tag="VEV83_02585"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK44024.1"
                     /translation="MKKYVFFLLPLILFGGCKNITRPFNSNLAADNKDVKAARSAHPN
                     IILIVGDDIGYEVLSCNGGQSYQTPFLDDIAAKGVRYTECHACPLCSPSRVSLLTGKY
                     NFRNYTAWGYLDPASNKTIGNMLQDQGYATCYAGKWQLSGYDSSIHALGWQKYSVWDP
                     GDPLIAGSRYKNPHIYQDGNFLPDTAIVNKYGEDMFVDYISSFMDTATKPYFIYYAMT
                     LAHAPFSPTPDDAEFA"
     gene            949..>1625
                     /gene="ftcD"
                     /locus_tag="VEV83_02590"
     CDS             949..>1625
                     /gene="ftcD"
                     /locus_tag="VEV83_02590"
                     /EC_number="2.1.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR02024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030409 - glutamate formimidoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030412 - formimidoyltetrahydrofolate
                     cyclodeaminase activity [Evidence IEA];
                     GO_process: GO:0019556 - histidine catabolic process to
                     glutamate and formamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate formimidoyltransferase"
                     /protein_id="HYK44025.1"
                     /translation="MQQIIECVPNFSEGNDLNIIRQITNEIESVDGVRLLNVDPGKAT
                     NRTVVTFVGDPQPVLIAAFKAIRKAGELIDMSKHKGEHPRMGATDVCPLIPVSNISME
                     ETADYARKLAERVGNELNIPVYLYECAQPKKERSNLSMIRAGEYEGFFKKINLPEWQP
                     DFGPAEFDAKRGATVIGARDFLIAYNVNLNTTSVRRANSIAFDVREGGRVKREGNPIT
                     GKIVRDE"
BASE COUNT          482 a          347 c          372 g          424 t
ORIGIN      
        1 gcaaattcag cgtcatccgg cgtaggcgaa aaaggagcgt gggcaagcgt cattgcataa
       61 taaatgaagt atggttttgt cgctgtgtcc atgaatgaac tgatgtaatc aacaaacata
      121 tcttctccat atttattcac gatcgctgta tctggcagga aatttccatc ctggtaaatg
      181 tgcggattct tatacctcga accggcaatc aacggatctc cggggtccca gacagaatat
      241 ttttgccaac ctaaagcatg tatggaagaa tcgtagccac tcaattgcca ttttcctgca
      301 taacaggttg catacccctg gtcctgcaac atgtttccaa tggttttgtt tgaagccggg
      361 tccaggtaac cccacgcggt atagttccga aaattatatt ttcccgttag cagtgaaact
      421 cgtgacggcg aacacagagg gcacgcgtgg cattcagtgt atcttactcc tttcgcggca
      481 atatcatcta gaaagggagt ttgatatgat tgaccgccat tacagctcaa cacttcgtag
      541 ccaatatcat caccgacgat caagatgata tttgggtgag ccgaccgtgc agccttgacg
      601 tctttattat ctgccgcgag gttcgaatta aaaggacgcg ttatattctt acatccgcca
      661 aaaagaatta atggcagcag aaaaaaaaca tactttttca tgtgggtggg cctaagattt
      721 aaagagttta gacaacggca aaaagagtct cagccttggt aaaaataaga acgaaaatta
      781 aaaattccgt agcaaaattc gttttttaag cagatctcct tttttccgct gtgagatgcg
      841 attttcagtt accgaaaacc gccggccggt tgaataaaag tattaaggct attcgcttat
      901 cttcacctct tatcatccga aaatttttcc tggaccgaat cacagtttat gcagcagata
      961 atcgaatgtg ttcccaattt cagcgaagga aatgatctga acatcatccg ccagatcaca
     1021 aatgaaattg aatctgttga tggtgtccgt ttgctcaatg tggatccggg taaagccacg
     1081 aatcgcacgg tagtgacttt tgtcggagat ccgcagcctg ttttgatcgc tgcttttaaa
     1141 gcaataagaa aagcaggtga attgatcgac atgagcaaac acaaaggtga acatccgcgc
     1201 atgggtgcaa ccgatgtttg cccactcatt cctgtttcca atatttcaat ggaagagact
     1261 gcggattatg cgaggaaatt agcagagcgc gtagggaacg aattaaacat tcccgtctat
     1321 ttatacgaat gcgcgcaacc aaagaaagag cgtagtaatt tatcgatgat acgagcgggc
     1381 gaatacgaag gcttctttaa aaaaataaac ttgcccgaat ggcaacccga ttttggtccg
     1441 gcagaatttg atgcaaaacg cggcgcgacc gttatcggcg cgcgagattt tttgatcgcg
     1501 tataatgtga acctgaatac gacctcagtg cgccgcgcaa attctatcgc gttcgatgtg
     1561 cgtgaaggag gcagagtaaa acgtgaagga aatccgatca caggcaagat cgtaagagat
     1621 gagaa
//
LOCUS       DASQJI010000080         1989 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1234058,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000080 DASQJI010000000
VERSION     DASQJI010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1234058"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VEV83_02595"
     CDS             complement(<1..404)
                     /locus_tag="VEV83_02595"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HYK44026.1"
                     /translation="METVLQEVAEKRHKEPIKTSTKYVFSFHEGDGKNKKLLGGKGAN
                     LCEMTQIGLNVPPGFVISTEACMSYLSGNKQLPPGVMEQVLGQMTNVEKEAGKKFGDQ
                     NDPLLVSVRSGSALSMPGMMDTILNLGLNKKT"
     gene            complement(630..1826)
                     /locus_tag="VEV83_02600"
     CDS             complement(630..1826)
                     /locus_tag="VEV83_02600"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HYK44027.1"
                     /translation="MSSIHQVVIVGGGNAGISVAAQLLRKDKHLDIAVIEPAEKHYYQ
                     PAWTLVGAGVFNILKTVRKESDVMPKGVTWIKKRVAGFDAEHNKVLLDGNDELQYEYL
                     IVAPGIQLNWNEIKGLEETLGKNNVCSNYSYQTAPYTFQCLKNFKGGKAIFHSPNTPV
                     KCGGAPHKIMYLAADYFRKHGVLDKADVELWSGGTRLFGVEKYERTFLKVVRRDRIKL
                     NFFVRLEEIDGPNHKAKFVGFGEKNKGEAHWVDFDMLHITPPQSAPDFVRNSSLANAA
                     GWVDVDRNTLQHVRYPNIFSLGDASSLPTGKTGAAVRKQAPVVVANLLALIEHKKVNA
                     SYTGYTSCPVVTGYGKLVLAEFDYTNKPVETFPFDQSKERWSMYQLKKRILPWLYWHK
                     ILKGKI"
BASE COUNT          541 a          467 c          387 g          594 t
ORIGIN      
        1 aaagtttttt tgttcagtcc aaggttaagg atcgtgtcca tcatgccggg catcgataac
       61 gccgaacccg aacgtacgga aacgagcaac ggatcattct gatcaccgaa tttttttccg
      121 gcttccttct caacattcgt catttggccg agcacttgtt ccatcacacc tggaggtagt
      181 tgcttattac ccgatagata actcatacac gcctcagtgg agatcacaaa accgggcgga
      241 acattcaaac caatttgcgt catctcgcaa aggttcgctc ccttgccgcc aaggagtttt
      301 ttatttttgc catctccttc atgaaaagag aagacatatt tagtggaagt ctttattggt
      361 tccttgtggc gtttttcagc cacttcttgt aatacagttt ccatatcagt gtttttttga
      421 agaaggccaa ggtagattgc gaaaagacaa gagatactga tcataatcag ttcaggcaca
      481 gagtttcatc atgaatttga gaagtgaatg gtgaacgcgg atgggtcgac aggatcgcaa
      541 cgcttaaaac gctctgatgg attttcgttc cacctgtgag gtcgccttaa ccgtccgacc
      601 gtacgtagac aaggctgtga tttgaagaac taaattttgc ctttcaaaat tttatgccag
      661 tatagccagg gcaaaattct tttcttcagc tggtacatgc tccatctttc ttttgactga
      721 tcgaatggaa aagtttcgac aggtttgttt gtgtaatcga attctgctaa caccagtttg
      781 ccatagccgg ttaccacggg gcatgatgtg taacccgtat aggatgcgtt cacttttttg
      841 tgttcgatca aagccaacag gttcgcaaca acgaccggcg cctgctttct taccgcagca
      901 cctgtttttc ctgttggcaa actggaggcg tcgcccagtg aaaatatgtt cggatagcga
      961 acgtgttgca gtgtgttcct gtctacatcg acccagcccg cagcgttggc cagggaactg
     1021 ttgcgcacga agtccggcgc gctctgcgga ggtgtaatgt gcagcatatc gaaatcaacc
     1081 caatgcgctt ctcctttatt tttttcaccg aatccaacaa attttgcttt gtgattaggc
     1141 ccgtcaattt cttcaaggcg cacaaaaaaa ttcagtttga tacgatcgcg tctaacaact
     1201 ttaaggaatg ttctttcata tttctccaca ccaaacaatc ttgtgccacc actccaaagt
     1261 tcaacatcag ccttatcgag cacgccatgt tttcgaaagt aatctgctgc caggtacatt
     1321 attttatgag gagcgccacc acatttcacc ggtgtgttag gactgtgaaa gatcgctttg
     1381 ccgcctttaa agtttttaag gcattgaaaa gtgtaaggtg cggtttgata actataatta
     1441 gaacaaacat tattttttcc caatgtttcc tctaatcctt tgatctcatt ccaattaagc
     1501 tgtatacccg gggcaacaat caaatattca tattgcaatt catcattccc atccagtaac
     1561 actttgttgt gttctgcatc aaaacccgct actcttttct ttatccacgt aacgcctttc
     1621 ggcattacat ctgattcttt tcttacggtt tttaaaatat taaaaacgcc tgctccaaca
     1681 agtgtccacg caggctggta ataatgtttt tccgctggtt caatcacagc gatatcgaga
     1741 tgcttatcct ttcttaacaa ttgtgctgcg acagatatac ctgcgtttcc tccgccgaca
     1801 atcacgacct gatgtattga tgacataaaa ttctatttag aaaaaattaa aattactaca
     1861 gccagctccc atgaatcgtg acattcatca cttcatcgct tgacgtttat caaaaaggaa
     1921 aacgaacaat aaaaaaaata gccaggcaaa aaatttaccc ggccatatag aaaaaaccgc
     1981 caccactct
//
LOCUS       DASQJI010000081        10922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2462711,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000081 DASQJI010000000
VERSION     DASQJI010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10922
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462711"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..996
                     /locus_tag="VEV83_02605"
     CDS             52..996
                     /locus_tag="VEV83_02605"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK44028.1"
                     /translation="MQLSIVIPLKNEEESLPELCEWISRVMQENGFSYEVILVDDGST
                     DDSWCVIEKISAANSNFKGIKFQRNYGKSAALNEGFRASKGDVVITMDADMQDSPDEI
                     PELRRMIVEDRYDLVSGWKKKRYDSKLKKNLPSKIFNAATRRVSGINLHDFNCGLKAY
                     RKKVIKSIEVYGEMHRNIPVLAKYAGFRNIGEKVVEHRPRKYGVTKFGWERFINGFLD
                     LLTLTFVGRFAKRPMHFFGLYGMLFFFVGFCISVYLVVAKLMRQNFGLTDKPTFYIGL
                     AVMIIGMQLFLTGFIAELIARNAPDRNNYLVEKKVGID"
     gene            1009..1170
                     /locus_tag="VEV83_02610"
     CDS             1009..1170
                     /locus_tag="VEV83_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44029.1"
                     /translation="MAQIIKLSELAKARKLSPKMKRVKQKLLQGPTMTKGQLKKYKEI
                     DSWMRGWKI"
     gene            1158..1559
                     /locus_tag="VEV83_02615"
     CDS             1158..1559
                     /locus_tag="VEV83_02615"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HYK44030.1"
                     /translation="MENLICLDSSVLIDFFRKKKSEKSFFIKITESGFSGFYIPLMEF
                     EIYFGATVQQINFWDNLFDDFIIVPYTRAVNKIAIDLARTLKRGNVLIDYKDLTIAAT
                     ALYVRSPLATINAKHFKHIKGLSVIGPDTTT"
     gene            1556..2731
                     /locus_tag="VEV83_02620"
     CDS             1556..2731
                     /locus_tag="VEV83_02620"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK44031.1"
                     /translation="MKKIIIIGPAYPLRGGLASFDERLARAFQQQGDVVSVYTFSLQY
                     PSILFPGTSQYSSEPAPKDIDIKVRINSVNPLNWIEVGNELKELRPDIIVVRYWLPFM
                     GPCFGTILRRVKKNRHTKIICIADNVLPHEKRFGDKQFTGYFLKPVDAFITMSEKVMH
                     DLRLFTNKPARQVVHPLYDNFGEKIDKAEARKYLDLNPADRIILFFGFIRNYKGLDLL
                     LEAMNVLKQSSNIKHQTPSDRVIRAGSNIKLLIAGEFYEDRKPYDDIIAKHNLASSLI
                     LRTNFIADSDVKYYLSAADFVIQPYRKATQSGVTPLAYHFEKPMLVTNVGGLPALVPD
                     GKVGLVAEPKPESIAEKIEQLYQLGEEHFLPALKEEKKKYSWNVLVDTIKELAELKS"
     gene            2815..3840
                     /locus_tag="VEV83_02625"
     CDS             2815..3840
                     /locus_tag="VEV83_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HYK44032.1"
                     /translation="MIYRSRAPLRIGLAGGGTDVSPYSDEFGGAILNATISHYAYAVI
                     EPSAENNITVRAADIKQRECYELQNELPINGTLDLHKGVYNRIKKDFGIPEKCFQLTT
                     YVDAPAGSGLGTSSTLMVAIIGAFTEMLKLPLGEYDIAHYAYEIERKDLQLAGGKQDQ
                     YAATFGGVNFMEFYAGDKVIVNPLRIRNEYLHELENNLVLYFTATSRESAAIIKEQQK
                     NVLQKNEKSIDAMHQLKEQARMMKEALLKGRLHEIGEILDFGFQQKRNMAHNISNDFI
                     EEIYEAAKRSGATGGKISGAGGGGFMTFYCPLNTRYKVMETLNTFGGQVKPYQFTKTG
                     LTTWTAH"
     gene            3954..4547
                     /locus_tag="VEV83_02630"
     CDS             3954..4547
                     /locus_tag="VEV83_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HYK44033.1"
                     /translation="MTEKIKGIVRASIDTKQKILNDDAFLKTIENTVDVIVHAFEKGN
                     RIWFCGNGGSAADAQHLAAEFSGRFYKNRRALPAEALHCNTSYLTAVANDYSYDVIYS
                     RLIDGITNEGDILVGLSTSGNSPNILKAFETAREKKLTTVGFTGATGGKMKDVTDHLF
                     NVPSTDTPRIQESHIMIGHIVCELVEEKLFGPNPKGE"
     gene            4549..5307
                     /locus_tag="VEV83_02635"
     CDS             4549..5307
                     /locus_tag="VEV83_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HYK44034.1"
                     /translation="MTQKAPTISAGTVPGIIILAGGLGTRLRKVVADLPKCMAIVNGK
                     PFLSYVVEYFRTQGIRNFIFSLGYKHEIIIEYLERAYSSLMADHPFMTFEYSIEGHPL
                     GTGGAIKKACTYCKCENILITNGDTLFAVDSEKALAFHIVHDADCTIAVKPMKHFSRY
                     GVIKLKPDRSVKSFSEKKYYEEGLINGGFYVLNVKRFLHESLPDKFSFETDYLEQLYH
                     ERKMYGLVQNEYFIDIGIPEDYERAQTEFRTLKF"
     gene            5311..5868
                     /locus_tag="VEV83_02640"
     CDS             5311..5868
                     /locus_tag="VEV83_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HYK44035.1"
                     /translation="MLFDLKKIDKSWTLFLDRDGVINVEKKEEYVLNPTEFIFMPGVL
                     EAIKLLSSQFGTIVVASNQRGIARGLMTVEDLHDVHALMLEEITHAGGRIDKIYFCAD
                     MHDDSPNRKPNTGMALQAKKDFSLIDFSKSIMVGNKLSDMQFGRNAGMQTVFIASTNP
                     EIPFPHELIDARFNSLFDFASAIRN"
     gene            5941..6861
                     /locus_tag="VEV83_02645"
     CDS             5941..6861
                     /locus_tag="VEV83_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44036.1"
                     /translation="MFRYFFPALIVITVSSKAQKISPADFASLKIQEDTLSYCAKSMV
                     FDSFAENRFHYDSLFIRLLVKALKTPNSFEYPFDSVYTISRLYAPDSSFRIFTWQLQK
                     DESYFRQEGAIQMKTRDGSLKLFPLIDASDYTSVPVDSVRSNLNWIGAIYYKIIVKEY
                     KGKKYYTLFGYDDNDFSSTRKWLEVLTFDGTGQPVFGGNYFDYKNDELKPAQPVTRFL
                     LEYQKDARARMVYDPDMDMIIFDHLISESNEPQKKFTLIPDGDYEGFKWQNGKWEHVD
                     KVFNQALQDGQAPRPKPVYDDKGNVLPDNN"
     gene            complement(6872..7558)
                     /locus_tag="VEV83_02650"
     CDS             complement(6872..7558)
                     /locus_tag="VEV83_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HYK44037.1"
                     /translation="MAEQSHIHTDVYLRVAAECKSKNVTLVAVSKTKPVEDILALYEL
                     GHRDFGENYVQELVEKKQQLPADIRWHFIGHLQTNKVKQIVDFVHLIHAIDSFKLLKE
                     INKQAEKIQRHIDCLLQVHIAQEETKFGLNEQELMELVDQISNAQFNNVGVCGLMGMA
                     SFTDDLNKVRQEFRFLKSVQDKLANFKPQTSNFKPQTLSMGMTADYKIAIEEGSNMIR
                     VGSLIFGERS"
     gene            complement(7576..8673)
                     /locus_tag="VEV83_02655"
     CDS             complement(7576..8673)
                     /locus_tag="VEV83_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44038.1"
                     /translation="MDYLLDRIETQQLKRNDFFMDGIFPSYISGNRKFKTRKQDNTMF
                     YNALIAYTLNDHYDAFPSEQKIICDSIISRSKRALSKFKNPNRPTYNFWRRDTTFRFP
                     YNSLFFGPKKTLPDDLDDTVLGLMILKEDDSTNAVHALMQDYTNSKPPLKTTYKIYSR
                     DSAYSTWFGKKMPVVFDVSVLCNILSFVQRNNLQWTTADSASLQLIVKTIQRDDIRKH
                     PLFVSPYYGNTSIILYHLARLMAVKDVPALEQLKPGLVTLARGRLQSSNNMLEKIILT
                     ITLLKWNEDPPSLNLTTSNVRDIETNDLPFFIGNIPSYFKQPWKEDFMSLRLLMYYHY
                     CPAWNDCLLMEYLVLRQRKSKNFETNETFKH"
     gene            complement(9020..9523)
                     /locus_tag="VEV83_02660"
     CDS             complement(9020..9523)
                     /locus_tag="VEV83_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HYK44039.1"
                     /translation="MVTKSVKKDDSPAQPLSLDQKDMAILRLLQHNARITVKEISAKI
                     HLSTTPVHERIKRMEEAGVIRQYATLVDHSKVKKGLMVICYVSLKQHNKTAGAKFIRM
                     IQEMNEVIECYNISGEFDFMLKVVAENMDAYYNFHVNKLSEAENIGHVQSVFVMGIIK
                     QTHVLVH"
     gene            9638..>10922
                     /gene="ahcY"
                     /locus_tag="VEV83_02665"
     CDS             9638..>10922
                     /gene="ahcY"
                     /locus_tag="VEV83_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HYK44040.1"
                     /translation="MSTITQRIDLNLPYKVKDISLAEWGRKEIKLAEAEMPGLMSLRA
                     EYGATKPLKGARIAGCLHMTIQTAVLIETLIELGAEVKWSSCNIFSTQDHAAAAIAAK
                     GIGVFAWKGETLEEADWCIEQTLFFGSEDRPLNMILDDGGDLTNMVFDKYPELIRNIK
                     GLSEETTTGVHRLYERMSNGTLPLPAFNVNDSVTKSKFDNKYGCKESLVDAIRRATDI
                     MLAGKVAVVGGYGDVGKGSAASLRGAGCRVIVTEIDPICALQAAMDGYEVKKMADAVK
                     EADIIVTASGCRDLITEKHFRAMKDKAIVCNIGHFDIEIDVAWLNNNYGDTKDTIKPQ
                     VDLYNIDGKDIVLLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWKNHDKYENKV
                     YVLPKYLDEKVARLHLKKIGVELDELSDEQASYLGI"
BASE COUNT         3241 a         2250 c         2434 g         2997 t
ORIGIN      
        1 gcgaaaaaaa atccgcaagg gccgttcgcg aatcaaccaa tgtaatatat aatgcagctg
       61 tcaatagtca ttccactgaa aaatgaagaa gaatctcttc ccgaattatg cgagtggata
      121 tcacgggtaa tgcaagagaa cggtttcagc tatgaggtga tcctcgttga tgacggcagc
      181 accgatgaca gttggtgcgt aatagaaaag atcagcgcgg cgaactctaa tttcaaggga
      241 ataaagttcc agcgcaacta cggcaaatcg gctgcgctca atgaaggttt tagagcgagc
      301 aaaggagacg tggttataac catggacgcc gacatgcagg acagtcctga tgaaataccg
      361 gaactgcgaa gaatgatcgt tgaagatcgg tatgacctgg tgagcggatg gaaaaagaag
      421 cggtatgaca gtaaactcaa aaaaaacctg ccgtccaaaa tttttaatgc agcgacacgc
      481 agggtctcag ggatcaacct gcatgatttc aattgtgggc tcaaggcgta ccgaaagaag
      541 gtgataaaaa gtattgaagt atacggcgaa atgcaccgca acataccggt tctggccaaa
      601 tatgccggct tcagaaacat cggtgaaaaa gtagtcgaac accgtccaag aaaatatggc
      661 gttacaaaat tcggatggga aaggttcatc aacggtttcc tggatctgct caccctgact
      721 tttgtcgggc gttttgcaaa acggccaatg catttttttg gattatatgg aatgttgttt
      781 tttttcgtcg gcttttgcat aagcgtttat ttggttgttg caaagctgat gcgacaaaat
      841 tttggcctca cggacaaacc gactttctat atcggtctcg ccgtaatgat cataggtatg
      901 caactgttcc ttacaggttt tattgctgaa ctgatcgccc gcaatgcacc cgaccggaat
      961 aattacctgg tagagaaaaa agtcggaatt gattaatttt gactcatcat ggctcaaata
     1021 atcaagctat cagagttggc taaagcgaga aagctctcac ccaaaatgaa acgggtaaaa
     1081 caaaagttat tgcagggacc aacgatgacg aaagggcaat taaaaaaata caaggaaatt
     1141 gatagttgga tgagaggatg gaaaatttaa tttgccttga ttcatcggta ctcatagatt
     1201 ttttcaggaa gaaaaaatct gaaaaaagtt tcttcataaa aatcactgaa tctggtttct
     1261 ccggttttta tattccccta atggaatttg agatttattt tggcgcaact gtccagcaaa
     1321 taaatttttg ggataacctt ttcgatgact ttattattgt gccatataca cgagccgtca
     1381 ataaaatcgc gatagatctt gcaaggacct taaaacgcgg caatgtactt atagactaca
     1441 aagacttaac tattgctgca acggctcttt atgttcgatc tcccctcgcc acaattaacg
     1501 caaaacattt caaacatata aaaggactgt ccgtaatagg tccggatacg accacgtgaa
     1561 gaaaattatc atcatcggcc ctgcatatcc cctacgcggc ggcttagcat cttttgatga
     1621 aaggttggcg agagcattcc aacagcaggg cgatgttgtt tctgtctata ctttctcttt
     1681 acagtatcct tcaatcttat ttcccggcac ttcccagtat tcgtccgagc cggcaccgaa
     1741 agacatcgat ataaaggttc gcattaattc tgtaaatcct ttgaattgga tagaagtcgg
     1801 caatgaatta aaagaattga gacctgacat aattgtagtg cgctactggt tgccgttcat
     1861 gggaccttgc ttcggaacaa tactaaggcg ggttaaaaag aaccgtcata caaagatcat
     1921 ttgcattgca gacaatgtat tgccgcatga aaaacgtttt ggtgataagc agttcaccgg
     1981 ctacttcttg aaaccggtcg acgcatttat tacgatgagc gaaaaagtga tgcatgatct
     2041 tcggctcttc acgaataaac cggcgcgaca ggtagtgcac ccgttgtacg acaatttcgg
     2101 agagaagatc gataaagcag aagcaagaaa atatctggat ctcaatcccg ctgacaggat
     2161 cattttattt tttggcttca tcaggaacta caaaggcctt gacctgctgc tcgaagccat
     2221 gaacgtgtta aaacaatcat caaacatcaa acatcaaacc ccgtccgacc gggtcatccg
     2281 ggcgggctca aacatcaaac tattaatagc cggcgaattc tatgaagacc gcaaaccgta
     2341 tgacgacatc attgcaaaac acaatcttgc ttcgtcgctg atactacgca caaatttcat
     2401 tgcagacagt gacgtgaaat attatttaag cgccgctgac tttgttatac aaccttatcg
     2461 caaagcaacg caaagtggcg taacgcctct cgcgtatcat tttgaaaagc cgatgctggt
     2521 aacgaatgtc ggcggtttgc cggctttggt ccccgacggt aaagttggac tcgtcgcaga
     2581 acccaaaccg gaaagtattg ccgaaaagat tgaacaacta tatcaactcg gcgaagaaca
     2641 cttcctgcct gctttgaaag aagaaaaaaa gaaatatagc tggaatgtac tggtcgatac
     2701 gataaaggaa cttgctgaat tgaaaagcta aaattaaaaa ttcaagaagg tcgcgggact
     2761 gcagtttgtt ttgtggcttt ttgatttttc cgttttcact tttactttgc acaaatgatc
     2821 tacagaagca gggcgccttt gcgcattggt ttggcaggcg gaggcacgga tgtgagtcct
     2881 tacagtgatg aattcggagg cgccatttta aatgcaacga tctcccacta tgcatatgcg
     2941 gttatagagc cgtctgctga aaataacatc acagttcgcg ctgcagatat aaaacagcgc
     3001 gagtgttatg aattgcaaaa cgaactgcca ataaatggca cgctggatct gcacaagggt
     3061 gtgtacaatc gcattaaaaa ggattttggg atcccagaaa aatgttttca gttgacaacc
     3121 tatgttgatg cacctgcggg cagcggtttg ggaacctcat ccacgttgat ggtggcgatc
     3181 atcggcgcct ttacagaaat gttgaaactg ccgttaggtg aatacgacat tgcgcattat
     3241 gcctatgaga ttgagcgcaa agacctgcaa ttggcaggcg gtaagcaaga ccagtatgca
     3301 gcgacgtttg gaggcgtcaa ctttatggaa ttttatgcgg gggataaagt gatcgtaaac
     3361 ccgcttcgca ttcgcaacga gtatctgcat gaactggaaa ataatcttgt attatatttc
     3421 accgctacaa gccgtgagtc tgcagccatc atcaaagaac aacaaaaaaa tgtattgcaa
     3481 aagaatgaga aatcgatcga cgcaatgcac cagttaaagg aacaggcacg catgatgaaa
     3541 gaagccttat tgaaaggaag gttgcacgag atcggcgaaa ttctcgattt tggttttcag
     3601 caaaaaagaa atatggcgca taacatcagc aatgatttta ttgaggagat ctatgaggcg
     3661 gcaaaaagat caggcgcaac cggtggcaag ataagcggcg caggcggagg tggattcatg
     3721 acgttttatt gtccgctaaa cacccgttac aaagtgatgg aaacattaaa tacttttggc
     3781 ggccaggtga aaccatatca atttacaaaa acaggattga ccacgtggac ggcgcactga
     3841 gggatttggg gatttagaat taaggatttc ggatttgaca ttctactgag atttgggatt
     3901 tgagatttat ttgggatttg ctttttggaa tttggaattt ttaaactaca gtaatgacag
     3961 aaaaaataaa agggattgtt cgcgcatcga tagacacaaa acaaaaaatt ttgaatgatg
     4021 acgctttttt aaaaacaatt gaaaataccg tcgacgtaat tgtgcatgcg ttcgaaaaag
     4081 gaaaccggat ctggttttgc ggcaacggcg gaagcgccgc cgatgctcaa cacctcgcgg
     4141 cagaattttc tggtcgtttt tataagaaca ggagagcgtt gcctgctgaa gcgcttcatt
     4201 gcaatacatc ttatctaaca gccgttgcta atgactacag ttacgacgtg atctactcac
     4261 ggctgatcga tggcatcaca aacgagggcg atattcttgt tggcttgagt acttcgggta
     4321 actctccaaa tattttaaaa gcgttcgaaa ctgcgcggga aaagaaattg acaaccgttg
     4381 gctttactgg cgcaactggc ggcaaaatga aggatgtgac tgatcatcta ttcaatgtgc
     4441 cctccacaga cactccgcgc atacaggaaa gccacattat gatcggtcat atcgtctgcg
     4501 aacttgtaga agaaaaatta tttggcccca atcctaaagg ggagtaagat gacacaaaaa
     4561 gccccgacca tttctgccgg gacagttcca gggataatca tcctcgccgg cggtttgggg
     4621 acacgtttaa gaaaggttgt ggccgacctt ccaaaatgca tggcaatcgt aaacggcaaa
     4681 cctttcctgt catacgtcgt tgagtatttt cgaacgcagg gcattagaaa ctttatattc
     4741 tctcttggat acaagcacga gatcatcatc gaatatcttg aacgtgcata ttcatctctt
     4801 atggctgatc atccatttat gaccttcgag tattcgatcg aaggccatcc gctaggtacc
     4861 ggtggtgcga taaagaaggc ttgcacatac tgtaaatgtg aaaatatctt aattacaaac
     4921 ggcgatacgt tattcgcggt ggatagcgag aaagcacttg cctttcatat cgttcacgat
     4981 gcggactgca cgattgccgt gaagccaatg aaacatttta gccggtatgg cgtcatcaaa
     5041 ttgaagccgg acaggtcggt taagagcttt agcgaaaaga aatattacga ggagggactg
     5101 ataaacggtg gcttctatgt gttaaatgtg aaaaggtttc tgcatgaatc attgcccgac
     5161 aaattttctt ttgaaaccga ttatcttgaa caactttacc acgaacggaa aatgtatgga
     5221 ttggtgcaga atgaatattt tattgacatt ggaataccag aagactatga gcgggcgcaa
     5281 acagagtttc gaaccctcaa attttagatt ttgctttttg acctgaaaaa aattgacaag
     5341 agctggacgt tgttcctcga tcgcgatggt gtgatcaatg tggagaaaaa agaagagtac
     5401 gtactcaatc ctaccgaatt cattttcatg cctggtgttc tggaagcaat taagttgctg
     5461 tcatctcaat ttgggaccat cgttgtcgct tctaatcaaa gaggtatagc gcgtgggttg
     5521 atgaccgtag aggatctgca tgatgtgcac gctttaatgc tggaggaaat aacgcatgcc
     5581 ggcggaagga tcgacaagat atatttctgt gccgatatgc acgatgacag cccaaaccgc
     5641 aaaccaaata caggtatggc tttgcaggcc aaaaaagatt tttcgctgat cgatttttcg
     5701 aagagtataa tggtcggcaa taaattaagt gatatgcaat ttggccggaa tgccggaatg
     5761 caaacggtat tcatcgcatc cacaaacccg gaaatacctt ttccgcacga gctcatagac
     5821 gcccgtttca attccctttt cgactttgcc tctgcgatcc gcaattaacg aaaaactaaa
     5881 ttttttcata catactataa ttaaatcggc ggccgttaat ggtttgtatt ttcgcaaaca
     5941 atgtttcgtt atttctttcc cgcgctaatt gttatcaccg tctcgtcaaa agcgcaaaaa
     6001 atatcgcctg ccgatttcgc cagtctcaaa atccaggaag acacgctcag ctattgcgca
     6061 aagagcatgg tgtttgattc gttcgctgaa aatcgctttc attacgacag tctattcatc
     6121 cgtttacttg ttaaagccct caagacgccg aattcttttg aatatccatt cgattctgtt
     6181 tacacgatct cccgtttgta tgcgccagac agcagtttca ggatttttac ctggcagttg
     6241 caaaaggatg aaagttattt caggcaggaa ggggcgatcc aaatgaagac gcgtgatggt
     6301 tcgttaaaat tgtttccctt gatagacgcg tcggactata caagtgtgcc tgtagattca
     6361 gtgcgctcaa acctgaattg gatcggcgcg atctattaca agatcatcgt gaaagaatat
     6421 aaaggcaaaa aatattacac cttgtttggg tacgacgaca acgatttcag cagcacgcgt
     6481 aagtggcttg aagtgctaac ctttgatgga accgggcaac ccgtatttgg cggaaactac
     6541 ttcgattaca aaaacgatga gttaaaaccg gcccaaccgg tcacccgctt tcttttagag
     6601 tatcagaaag acgcacgtgc acgaatggtc tacgacccgg acatggacat gatcattttt
     6661 gatcacctga tcagcgaaag caacgaaccg cagaaaaaat ttacattaat tcccgacgga
     6721 gattatgagg gattcaaatg gcaaaatgga aaatgggaac atgtagataa agtgtttaac
     6781 caggcattgc aggatgggca ggcgccgcga cctaaaccgg tctacgacga taaaggaaat
     6841 gtgttgcccg ataataatta aaccgttgtt gctaacttct ctcaccaaat attaaactgc
     6901 ccacgcggat catattgctt ccctcttcaa tagcgatctt ataatccgca gtcattccca
     6961 tagataaagt ttgaggtttg aagtttgaag tttgaggttt gaagtttgcc aatttatcct
     7021 gtacagattt aagaaatctg aattcttgtc ttactttgtt gaggtcgtcg gtaaagcttg
     7081 ccattcccat tagtccgcac acaccaacat tattgaattg cgcattgcta atttgatcga
     7141 ccagttccat aagctcctgt tcgtttaggc cgaacttcgt ttcttcctgc gcgatatgga
     7201 cctgcagaag acaatctata tgtcgttgga ttttttcagc ctgcttatta atttccttca
     7261 gcagcttaaa gctatcaata gcatgaataa gatgtacaaa gtctacgatc tgttttactt
     7321 tgttggtctg caaatgcccg ataaaatgcc atcggatatc agccggtaat tgttgtttct
     7381 tctcaaccaa ttcctgcacg taattctccc caaaatctct atgtcccaat tcatacaaag
     7441 caagaatgtc ttcaacgggt tttgttttgc taactgcgac aagcgtaaca ttttttgatt
     7501 tgcattctgc tgcaacccgt aaataaacat ctgtatggat gtgcgattgt tccgccattt
     7561 taatgtttca ccgtttcaat gtttgaatgt ttcgtttgtt tcaaagttct ttgatttccg
     7621 ttgtcttagt acaaggtatt ccatgagcag gcaatcattc catgcagggc agtagtgata
     7681 atacatcagc aaccttaaac tcataaagtc ttccttccag ggctgtttaa agtatgatgg
     7741 aatattaccg ataaagaaag gaagatcgtt tgtttcgatg tcccttacat tgctcgtcgt
     7801 taagttcagc gatggcggat cttcgttcca tttcaataat gtaatcgtca aaattatttt
     7861 ctccagcata ttatttgacg attgcagtcg tccgcgcgca agcgtaacaa gccctggctt
     7921 taattgctcc agcgccggca catctttgac ggccataagg cgtgccaggt gatataaaat
     7981 gatggaagtg ttgccatagt aaggcgatac aaacaatggg tgcttcctga tatcatcacg
     8041 ctgaattgtt tttacaatta actggaggct tgcgctatct gcagttgtcc attgcaaatt
     8101 atttctttga acaaaactga gtatgttaca taaaacactc acatcaaaaa ccactggcat
     8161 tttttttcca aaccatgttg aatatgcgct atcgcgggaa tagatcttat aagtcgtctt
     8221 taacggtggt tttgaattag tataatcttg cataagcgca tgtaccgcat ttgtggaatc
     8281 atcctctttc aatatcatga gcccaagcac agtatcatcc aggtcgtccg gcaacgtttt
     8341 tttcggaccg aagaataaag aattataggg aaatcgaaaa gtcgtatccc ttctccagaa
     8401 attgtatgtg gggcggttcg ggtttttaaa tttagagagt gctctcttac tgcgtgaaat
     8461 gatgctgtcg caaatgattt tctgttcaga aggaaatgca tcataatgat cgttaagcgt
     8521 ataagcgatc aaagcattat aaaacatcgt attgtcttgt ttgcgcgttt taaacttcct
     8581 gttaccgctg atataggacg ggaagattcc atccatgaaa aaatcatttc gtttcagttg
     8641 ttgagtttcg atccggtcaa ggaggtaatc catggtgagg ctgtcctggc ccgttgctgt
     8701 aagagtgcaa aggcataggg tgagcaaaac ggtcagacgg ttcaaaaccg tcagaccgat
     8761 acgttgtttt aaaaaatcat tgcggacatt gcccaaaaac gaccggcgtt catgcaaaca
     8821 aggatgcatg agatttccct cccgatctaa atcgggatcg aaatgacgat gtacaatgtg
     8881 gtgtcttctc aaatagaaat ctggattgcc gcacagcaat gcagacgtac aaaagtgcga
     8941 cgcaactggc gatgccataa aatgccgaag ctggctacat aaaaaaaata catccattac
     9001 gcgaacatct taactaaaat taatgcacta aaacatgtgt ttgttttatg atgcccatta
     9061 caaatacact ttgcacgtgc ccgatatttt ctgcttcgct aagtttattc acgtgaaaat
     9121 tataataagc atccatattt tcagcaacca cctttaacat aaaatcaaat tcacccgaga
     9181 tgttgtaaca ctctatcact tcattcattt cctgtatcat tctaatgaac tttgctccgg
     9241 cggttttatt atgctgcttc agcgacacat aacagatcac catcaggcct ttttttactt
     9301 tcgaatgatc cacgagcgtc gcatactgtc ttatgacgcc tgcttcctcc atgcgcttaa
     9361 tgcgttcatg aaccggcgtt gtgctcaggt gaatttttgc ggaaatttct tttaccgtta
     9421 tgcgggcatt gtgctgcagc aagcgcaaaa tggccatatc cttttgatca aggcttaatg
     9481 gctgcgcagg cgaatcgtct tttttaactg atttggttac cataaaactt cgcagttatt
     9541 ctttaaaatt gcggaaaaag ttaattctat cccgattttt gacaaataaa tattatttta
     9601 tcctattatt ttatttttgc cttctaaaca aaaacacatg tcaacaataa cacaacggat
     9661 cgacctgaac cttccttaca aagtgaaaga catttcactc gccgaatggg gacgtaaaga
     9721 aataaagctt gcagaagcgg aaatgccggg actcatgtca ctgcgcgctg agtatggcgc
     9781 caccaaaccg ttgaaaggtg cccgtatagc gggttgcctg catatgacga tccaaaccgc
     9841 cgtattgatc gaaacattga tcgagctcgg cgcggaagta aaatggagtt cctgcaacat
     9901 cttttcaacg caggaccatg ccgcagctgc gatcgccgcg aaaggcattg gtgtttttgc
     9961 atggaaaggc gaaaccctcg aagaagctga ctggtgcatt gaacaaactt tattttttgg
    10021 aagcgaagac cgccctttga acatgatcct cgacgatggt ggcgacctta cgaatatggt
    10081 atttgacaag tacccggaac tgattcgcaa catcaaaggt ttgagtgaag aaactacaac
    10141 aggcgtgcat cgtttatatg aacgtatgag caacggcacg ctgccgctac cggcattcaa
    10201 tgtaaacgat tctgttacga aatcgaaatt cgataacaaa tatggttgca aggaaagttt
    10261 agttgacgcc atacgtcgtg caacagacat tatgttagcc ggaaaggttg cggtcgtggg
    10321 gggttatggt gacgtgggca agggttcagc cgcttcattg cgtggtgcag gttgccgtgt
    10381 tattgttact gagatagatc ctatttgcgc tctgcaggct gcaatggatg gatatgaagt
    10441 gaagaaaatg gcagacgcag taaaagaagc agatatcatt gttacggctt ccggttgccg
    10501 cgacctcatc accgaaaaac acttccgtgc aatgaaggat aaagcgattg tttgcaatat
    10561 tggtcatttc gatattgaaa ttgatgtagc ctggcttaac aacaattacg gtgatacgaa
    10621 agacaccatc aaaccgcagg ttgatctgta taatatcgat ggcaaagaca tcgtgctttt
    10681 agctgagggt cgtttggtaa atcttggttg tgcaaccggg catccgtcgt ttgtgatgag
    10741 taattcattc acgaatcagg tgctggcaca aatagagtta tggaagaacc atgacaaata
    10801 tgaaaacaaa gtgtatgttc tccccaaata cctcgacgaa aaggttgcac gtcttcactt
    10861 aaaaaagatc ggcgtggaac tggatgaatt aagtgacgag caggcttctt atttgggtat
    10921 cg
//
LOCUS       DASQJI010000082         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_927186,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000082 DASQJI010000000
VERSION     DASQJI010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927186"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VEV83_02670"
     CDS             <1..671
                     /locus_tag="VEV83_02670"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HYK44041.1"
                     /translation="FFNHEITTKPNGDTLRESEDRSFNIYQMNYDEVKTYDVGLKVNP
                     RFPQQQKMRAVKPLLTDVIDSVEAYASPHNKKPVFYNIETKCSPDGDDIYHPKPDVFV
                     DLIMKVINEKNLQDRVIIQSFDVRALQYLHERFPSIKTSLLVEQADHIPFAQQLKALG
                     FIPTIYSPEHTLVTALLIKQCHDMGVKLIPWTVNDRSEIDKLKRLGVDGVITDYPNLF
                     NTGK"
     gene            719..1540
                     /gene="pyrF"
                     /locus_tag="VEV83_02675"
     CDS             719..1540
                     /gene="pyrF"
                     /locus_tag="VEV83_02675"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HYK44042.1"
                     /translation="MDRIELIKQIRQKKSYLCVGLDTDLMKMPAFLRSGANAVFDFNK
                     AIVDATRDHCVSYKLNIGFYEVLGSKGWDALKETVDYISKTHFTIADAKRGDIGSSSA
                     QYAKTFFETYDFDAVTVAPYMGEDSIRPFLDYENKVTIVLGLTSNEGARDFELLKTSA
                     NKYFYEEVITKVSTWGTPDNLMFVVGATQASELVNIRKIIPDHFLLIPGIGFQGGSLE
                     DVSKYGINKDCGLLVNVGRAITYASSDEKFAEKAAEVARRYQEEMEGYLELAIRN"
     gene            complement(1681..>2607)
                     /locus_tag="VEV83_02680"
     CDS             complement(1681..>2607)
                     /locus_tag="VEV83_02680"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK44043.1"
                     /translation="KFGYGEFIHLEHRNCKACMMKADKLFRVVEENCFNEVVRLDEMD
                     ATGVVQQVLSTIPVLFNYWANTEDALETSRFFNDHIAEVVSRYPGRFIGIGTVPLQDV
                     DLAIREMERCITELHMPGIEIGTNVNGKNLSEKNLLPFFEAAEKLNCSLFVHPWEMMG
                     ENNMQDYWLPWLVGMPAETSRAICSLIFGGVMEKFPKLKIAFAHGGGSFPFTIGRVKH
                     GFDVRPDLVAVDNNISPEKYLGKFWVDSLVHDGKALKYLIEVIGEDKICLGSDYPFPL
                     GEAEPGKLINESLSDETVKEKLLYKNALEWIS"
BASE COUNT          781 a          585 c          553 g          688 t
ORIGIN      
        1 cattttttaa tcacgagata actacgaagc cgaacggcga tactttgcgc gaaagcgaag
       61 accgatcatt caacatctat caaatgaatt atgatgaagt gaaaacatac gatgttggtt
      121 tgaaggttaa tcctcgtttt ccgcaacagc aaaaaatgcg tgccgtgaaa ccgctcctta
      181 ctgatgtgat cgactctgtg gaggcatacg cctcaccgca taataaaaaa cctgtgttct
      241 ataatatcga gaccaaatgt tcacccgatg gcgacgatat ctatcatcca aagcccgacg
      301 tttttgtgga tttgatcatg aaggtgataa acgaaaaaaa tctacaagac cgcgtgatca
      361 tacaatcgtt cgatgttcgc gctcttcaat atttgcatga acgcttccct tcaataaaaa
      421 catcgttgct ggttgaacaa gccgatcaca ttccgttcgc tcaacaactc aaggcgctcg
      481 gatttattcc aacgatttac agcccggaac acacacttgt cacggcgctg ctcattaaac
      541 aatgtcatga catgggtgtt aagttaattc catggacagt taacgacaga tcagaaatag
      601 ataaactgaa aagactcggt gttgacggcg tgattaccga ttaccccaac ttgttcaaca
      661 ctggcaaata aatatttctt gcgaatagcc ggtaattatt tgaaatttgc gccgcaatat
      721 ggatcgcatt gagctcatca aacaaattcg tcaaaagaaa agttacttat gtgttgggct
      781 cgacactgat ctcatgaaga tgcccgcttt tctgcgatca ggcgcaaacg ctgtattcga
      841 ctttaacaaa gcgatcgtcg acgcgacaag agatcattgt gtgagttaca aactcaacat
      901 tggcttctac gaagtgctgg gctctaaagg ctgggatgcc ttaaaagaaa ccgttgatta
      961 tatttccaaa acacatttca cgatcgcaga tgccaagcgt ggcgacatcg gcagcagctc
     1021 agctcaatac gcgaaaacat tttttgagac ctacgatttt gatgcggtta cggttgcgcc
     1081 ttacatgggc gaagacagta tccgtccgtt tcttgattac gaaaataagg tgacgatcgt
     1141 gttgggtctg acatcaaacg aaggagccag ggattttgag ctgctgaaaa catcagccaa
     1201 caagtatttt tatgaggagg tgataacgaa agtgtcgacg tggggaacgc ccgataattt
     1261 gatgttcgta gttggtgcca cacaggccag tgaactggtg aacattcgaa aaataattcc
     1321 ggatcatttc ttacttattc ccggcatagg tttccagggc ggcagtttag aggacgtaag
     1381 caaatatggg attaataaag actgcggact acttgtaaac gtcggccgtg ctattacgta
     1441 tgcatcaagt gatgaaaagt tcgcagaaaa agcagcggaa gtcgcgagac ggtaccagga
     1501 agaaatggaa ggctatttgg aattagctat taggaattag gaattgggaa gtacgaagta
     1561 ggaagtaaga agtaagaagt aagaagtaag aagtaagaag taggaaggat tacgttagac
     1621 atcgacatca gacatcagac atcagagatc agacatcata catctgacat cagacatctc
     1681 tcaactgatc cactccaaag catttttgta aaggagtttt tcttttaccg tttcgtccga
     1741 caaactttca tttatcaatt ttcctggctc ggcttctccc aatgggaacg gataatcgct
     1801 gcctaagcag atcttatcct cgccaataac ttcaatcaaa tacttcagtg cttttccatc
     1861 gtgcaccagg ctgtcgaccc aaaatttgcc caaatatttt tcgggggaaa tgttgttgtc
     1921 aactgcaacc aggtcgggcc gcacatcaaa gccatgtttt actctgccga tcgtaaatgg
     1981 aaatgagccg ccgccgtggg caaacgctat ttttaatttc ggaaattttt ccatcacgcc
     2041 accgaatatc aaggaacaga tcgccctcga tgtttctgca ggcatgccca caagccacgg
     2101 cagccagtaa tcctgcatgt tgttttctcc catcatttcc catgggtgaa caaacaatga
     2161 acagttcagc ttttcggcag cctcaaaaaa aggaagcaga tttttttcgc tcaaattttt
     2221 tccgttcaca ttcgttccta tctcgatacc aggcatgtgg agttcggtta tgcaacgctc
     2281 catttctcga atggcaagat caacatcctg caggggaaca gttccgatgc caataaatct
     2341 tccaggataa cggctaacta cttcggctat atgatcgtta aaaaatctcg aggtctccaa
     2401 cgcatcctca gtattcgccc agtaattgaa taaaacagga atggttgaca gtacttgttg
     2461 gaccacaccc gtagcatcca tttcatccag tcgaacgacc tcattaaaac aattttcttc
     2521 cacaactctg aagagcttgt cggctttcat catgcacgct ttgcagttac gatgttccaa
     2581 atgaataaac tctccatagc caaactt
//
LOCUS       DASQJI010000083         2775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1695057,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000083 DASQJI010000000
VERSION     DASQJI010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695057"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..840
                     /gene="gldD"
                     /locus_tag="VEV83_02685"
     CDS             103..840
                     /gene="gldD"
                     /locus_tag="VEV83_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility lipoprotein GldD"
                     /protein_id="HYK44044.1"
                     /translation="MWKCKFFTRVFIGRYLRRDDASLMSAMREKAGNRSAITIHNSPF
                     TVHRSHRLQFVRISILIAIFICSSCNSPNTPKPPGYFAISFPEKKYQLFNQPGYPYTF
                     EYPVYGRVVKDTTFFGDPTENPWWINIDFPQFSGRIYLSYKVIGDYTLEKLINDAFNL
                     TNKHSIKASYIDDSVISTQNNVHGMFFKVEGDVATANQFFLTDSTKNFLRGALYFDAT
                     PNQDSLRPVNDFLVQDMKHLINTFRWK"
     gene            910..1494
                     /locus_tag="VEV83_02690"
     CDS             910..1494
                     /locus_tag="VEV83_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3109 family protein"
                     /protein_id="HYK44045.1"
                     /translation="MIAIDNKLVSDEIVEKQFVCDLDKCKGGCCEDGDAGAPLDLSEL
                     DELIHNYEVIKPYLTPEGIKAIEQQGKYHFDREFGWVTPTIKGEMCAYGYKDKNGIIK
                     CGIETAFNEGKLKWKKPISCHLFPIRTKKSTEDRNLEYLNYEPRHDLCKAACKLGKRL
                     QVPVYVFLKDALIRKYGEDFYKALEAAALYVEEK"
     gene            1553..>2775
                     /locus_tag="VEV83_02695"
     CDS             1553..>2775
                     /locus_tag="VEV83_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HYK44046.1"
                     /translation="MNKTASTFIAKSTVKAGNLDHRRKINFNISKYNAVVPAAKLQFA
                     DLLHTRKQAKNIKWKAIEKLDIMLELFEKNISGRGAKVIWAETAEDALSEIGRICKQK
                     QCKTLVKSKSMVTEEIHLNRFLEKHGIESVETDLGEYIQQLDNEAPYHIVTPAMHKSK
                     EDVAKLFAEKLNVPEGLTPQQLTQVARQKLRSKYVEAEIGVTGANFLIADTGSVAVSE
                     NEGNARLSCAWPKTHIVVAGIEKIIPSLNDLALFWPLLATFGTGQQVTVYNTVISGPK
                     QAKEADGPEEMYVILIDNGRTNLLANPKAREALYCIRCGACLNACPVYKNIGGHSYDT
                     AYSGPIGSVITPHLKNMREYKHLSYASSLCGNCTEVCPVRINLHELLLENRYESVASG
                     ESGVSERIAWKMWKQA"
BASE COUNT          844 a          546 c          655 g          730 t
ORIGIN      
        1 cttgaaattc aaaaaaatcg tttacagaaa ataaaaatca cgatcaagcc gcatgtcgca
       61 gcagcaaagt aggaatggtg aatggtgaat tgtcaaatgt caatgtggaa gtgtaaattc
      121 tttacccgtg tttttattgg gcggtacttg aggcgcgacg atgcaagttt aatgtctgcg
      181 atgagggaaa aggctggtaa ccgctcagcc atcacaattc acaattcacc attcacagtt
      241 caccgttctc accgcttaca atttgttcgc atttccatct taattgctat tttcatctgc
      301 tcttcctgca attctccaaa cacgccaaag cctccgggat attttgcgat tagttttccc
      361 gaaaaaaaat accagttgtt taatcagccc ggatatccgt acacgttcga atacccggtt
      421 tacgggaggg tagtgaaaga cactacgttt tttggtgatc cgacagagaa tccgtggtgg
      481 ataaatattg actttcccca gttctccggc cgcatttatt taagctataa agtgattggc
      541 gattatacgt tggaaaaact gataaatgat gcttttaatc tcaccaacaa gcactctatt
      601 aaggcttcat atatcgacga ttcggtgatc agcactcaaa ataatgtgca cggaatgttt
      661 tttaaagtgg aaggagatgt agcgactgcg aaccagtttt ttttgaccga ctcgactaaa
      721 aattttcttc gcggggcttt gtatttcgac gcgaccccaa accaggactc cttgcgcccg
      781 gttaatgatt tcctggtgca ggatatgaaa catttgatca atacgttccg ctggaagtag
      841 ttactgataa gcccgaccgg aatgaactcg tacctttaat tttcaaattt ttacttttta
      901 ctttgtagca tgattgcgat tgataataaa cttgtgagcg atgaaattgt agaaaagcaa
      961 tttgtctgcg acctcgataa atgtaaaggc ggctgctgtg aagacggcga tgccggcgcg
     1021 ccgctggatc taagcgaact tgacgaactt attcataatt atgaggtgat caaaccctat
     1081 ctcacgcctg aaggtatcaa agcgatcgag caacagggaa agtatcattt tgacagggag
     1141 tttggctggg ttacgcctac tataaaagga gaaatgtgcg cgtatgggta taaagataaa
     1201 aatggtatta taaaatgcgg aattgagacc gcgttcaacg aaggcaagtt aaaatggaaa
     1261 aagccgatca gttgtcattt gttccctatt cgtacaaaga aaagcaccga agacaggaat
     1321 ttagaatatt tgaattacga accgagacac gatctatgca aagctgcctg taagttggga
     1381 aaacgcctgc aggttcctgt atatgtattt ttaaaagatg ctttgataag gaaatatggc
     1441 gaagactttt acaaagcatt agaggcggct gcgttgtatg tagaagagaa gtgattcggg
     1501 aattaggaat taggatttta agcactgtcg cattgaccat tcactattca ccatgaataa
     1561 aactgcttcc actttcatag cgaagagcac tgtaaaggcg ggcaatcttg atcaccgcag
     1621 gaaaatcaac ttcaacatta gcaaatacaa tgcggttgta cctgctgcca aattgcagtt
     1681 tgccgattta ctgcataccc gcaaacaggc gaaaaacatt aaatggaaag caatagagaa
     1741 gttggacata atgctcgaat tgtttgaaaa aaatatttct gggcgtggtg caaaagttat
     1801 ttgggccgaa acggcggaag atgcgttgag tgaaattggc aggatctgta agcagaagca
     1861 atgtaaaaca ttggtgaaga gcaaaagcat ggtcaccgag gaaattcact taaaccgttt
     1921 tcttgaaaaa catggtattg aaagcgtgga gaccgatctt ggagaatata tacagcaact
     1981 ggataatgag gcgccatacc acatcgtaac accagcgatg cataagagca aagaagacgt
     2041 tgcaaaattg tttgcggaaa aattgaatgt gccggaaggt ctaacgcccc agcaattaac
     2101 gcaggttgca cggcaaaaac ttcgttcaaa gtatgtggag gcggagatcg gtgtaacggg
     2161 tgcaaatttt ttgatagctg ataccggctc cgttgctgta agtgaaaatg aaggcaacgc
     2221 acgtttaagt tgcgcgtggc caaaaacgca catcgttgtt gcgggcattg aaaagataat
     2281 tccttcgctc aatgatcttg cgttgttttg gccgcttctt gcaacgtttg gcaccgggca
     2341 acaggtcacc gtttacaata ccgtaatttc cgggccaaag caggctaagg aagccgatgg
     2401 acctgaggag atgtatgtga tactcatcga caatggccga actaatttgc ttgcaaatcc
     2461 aaaagctcgc gaggcactgt attgtatccg ttgtggcgca tgtttgaatg catgccctgt
     2521 gtataaaaac atcggtggtc acagttatga cacggcatac agcggcccga tcgggagcgt
     2581 gatcacaccg catctaaaga atatgcgaga gtacaagcac ctaagttatg cttcatctct
     2641 gtgcggcaat tgtactgaag tttgtcctgt tcgaataaac ctgcacgagc tgctattgga
     2701 aaaccgctac gaatccgttg cttcaggaga aagcggcgtc agtgaacgaa ttgcctggaa
     2761 aatgtggaaa caagc
//
LOCUS       DASQJI010000084         1916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_466583,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000084 DASQJI010000000
VERSION     DASQJI010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466583"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VEV83_02700"
     CDS             complement(<1..953)
                     /locus_tag="VEV83_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44047.1"
                     /translation="MSSGSNFGVDSFGVKKLYADNTAKASENWTMGNMLSDSRIRVDG
                     TITDKGGGEWEGHVTSSDNPASFRINVNTTNPNAMDPNTQSILGTDWRKLLAAGYMVD
                     AKDFRNVEMTIYWKVLSWSDSDEMSLYCRGGRHSSGWPAGCLGMCYKGQIQKAGNSRW
                     AKEYHHNSGSTGYWFTAGHNTSTLGDRTNVWTGQKVVVFDKTVNGKPVVRMEVWKETS
                     DETNGNPSTQNWQMINWLEDDGTNTSDPSDTGFISNCHGVSKQQFLWGGPTATFRIDN
                     VIVRVKKASVRHIVGEGTGSVPPPTCPSGQHYDETLQICVQ"
     gene            complement(950..>1916)
                     /locus_tag="VEV83_02705"
     CDS             complement(950..>1916)
                     /locus_tag="VEV83_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44048.1"
                     /translation="IPSHVLDGDEEIGFKAFGQFVSMWAKTSTGFTSGIVPSNIDHGQ
                     LASQGYMLTENDWKDVEMTGYFKFEEGTADDMSISMQARGAQENGVHNCAGTKYMAEI
                     NLAGKVRFGKKQWHLSQFNKDWSDTSVLLNQVDAIANGWFGFKFMIYNVGIGDDNPAG
                     NTGVRLEVWIDADNSNTWVKAAETIDNGGWGNTDNCGITTPPDQIITWGGPLAVFNIN
                     NQQSIRFKLLSVREISPGGEFGSPVNPAGVITGVLPDVTTRVYASLKMHYRIGVIAAP
                     TCFTETPSNPDPGQGGGGTVPPPPPPPSGTVVVTKNLATGYDIIQ"
BASE COUNT          524 a          453 c          343 g          596 t
ORIGIN      
        1 tcttgcacac atatctgtaa tgtttcatca taatgctgac cagaaggaca tgtaggaggt
       61 ggaacgctac cagtaccttc acctacaata tgtcttacac ttgctttctt aacccttaca
      121 attacattgt cgattctaaa agtagcagtc ggtcctcccc ataagaactg ctgtttagaa
      181 acgccatgac agttagaaat gaaaccagta tcggaagggt cagatgtatt tgtaccatca
      241 tcttcgagcc aatttatcat ctgccagttt tgcgtcgaag gattaccgtt agtttcatca
      301 cttgtttcct tccaaacctc cattcgaacc acaggtttgc cgtttacagt tttatcgaag
      361 actacaactt tttgaccagt ccaaacgttt gttctatctc ctaatgtcga agtattatga
      421 cctgcagtaa accaataacc cgttgaacca gaattatgat gatattcttt agcccaccga
      481 ctgttacccg ctttttgaat ttgccctttg taacacattc ctaaacatcc agcaggccat
      541 ccactagaat gccgcccacc tctgcaatat aacgacattt cgtccgaatc tgaccaggaa
      601 agtaccttcc aatagattgt catctctaca ttcctaaagt ctttagcatc aaccatgtaa
      661 ccagcggcta gtaactttct ccaatctgta cctaagatag attgagtgtt agggtccatt
      721 gcattcgggt ttgttgtatt tacgttgatc ctaaaagatg cgggattatc tgaagatgtt
      781 acatgacctt cccattcgcc gccgccctta tccgtaattg taccatcgac tctaattcta
      841 gaatcagata gcatgttacc cattgtccaa ttctcagatg ctttggctgt attgtcagcg
      901 tagagtttct ttactccaaa cgaatcaaca ccaaaattag atccagaact cattgtatga
      961 tatcatatcc tgttgctaga ttctttgtaa ctacaactgt gccgctcggt ggtggtggtg
     1021 gtggtggaac tgtaccgccg ccgccttgtc ctggatcggg atttgaaggc gtttccgtaa
     1081 aacatgttgg tgctgcgata acaccaatac gataatgcat tttcagggaa gcataaactc
     1141 tagtagtaac atctggtaat acccctgtaa taacacctgc agggtttacg ggtgatccga
     1201 attcaccacc tggagagatt tctcttacag ataataattt gaatctaata gattgttgat
     1261 tattaatatt gaaaactgct agcggtcctc cccatgtaat gatttgatcg ggaggtgttg
     1321 taattccgca gttatccgta ttaccccagc cgccattatc aattgtttct gcagctttaa
     1381 cccacgtgtt agaattgtct gcatcaatcc atacttctaa acggacacct gtattacctg
     1441 caggattatc gtcaccaatt ccaacattat agatcatgaa cttaaagcca aaccaaccat
     1501 tagctattgc gtcgacctgg ttcagtaaaa ccgatgtatc tgaccaatct ttattgaatt
     1561 gtgataagtg ccattgcttc ttaccgaaac gaactttacc cgctagatta atctctgcca
     1621 tgtatttagt accagcgcaa ttatgtacgc cgttttcttg agcacctcta gcttgcatgg
     1681 aaatagacat atcgtctgcg gttccttctt caaacttaaa gtacccagtc atttctacgt
     1741 ccttccaatc attttctgtt agcatatagc cctgagaagc tagctgtcca tgatctatat
     1801 tggaaggtac aattcctgaa gtaaaaccag ttgaggtttt agcccacatt gaaacgaatt
     1861 gaccaaatgc tttgaaccct atctcttcat ctccgtctaa aacatggctt gggata
//
LOCUS       DASQJI010000085         6991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2463013,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000085 DASQJI010000000
VERSION     DASQJI010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6991
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2463013"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VEV83_02710"
     CDS             complement(<1..674)
                     /locus_tag="VEV83_02710"
                     /inference="COORDINATES: protein motif:HMM:NF039454.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6443 domain-containing protein"
                     /protein_id="HYK44049.1"
                     /translation="MNKFRYFLSFVACLSCPFLFSPIQAQKPGSQTQPGAGTESIATK
                     PVAYSPTTPVNSIRVWEATKSFATEADLVSTDNTLDEVKQTTQYFDGLGRPLQTVSKG
                     SSPLGYDNVIPFLYDAYGRETLKYLPYVSSGHSDGTFKLNPFQEQEEFLKTFYNPGNA
                     PGGEAYFYGRTDYEASPLNREIATFAPGNSWVGDAVGVSTGYMTNTGTGAGADNVKIW
                     DIGLANG"
     gene            complement(714..1232)
                     /locus_tag="VEV83_02715"
     CDS             complement(714..1232)
                     /locus_tag="VEV83_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44050.1"
                     /translation="MKTIIASVGFIFLAAFVSVNNFYSYSVTTADGKDISLDQYRGKK
                     VLLVVLPVSKTTQDSMLLIAMDSLVTFDTIAIIGIPSYEDGFQDDSLESLTTWYKSLA
                     GDSIVITQGMNTRKTSPYQSDLFAWLTSKDLNGHFDQDVMGAGTKYLINEAGELYGVG
                     SSESLLTDDFIK"
     gene            complement(1236..5465)
                     /locus_tag="VEV83_02720"
     CDS             complement(1236..5465)
                     /locus_tag="VEV83_02720"
                     /inference="COORDINATES: protein motif:HMM:NF039935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5977 domain-containing protein"
                     /protein_id="HYK44051.1"
                     /translation="MRFIRTPIICVIYFLLVCIRSVGQQPQLNESLIAPTPDVVAFVK
                     NGLTPVTLYTGLPNVSIPIIDLKSTKLHLPIVLSYNYNGYQPNQDASWIGMGWNVEAG
                     GVITRIVKGLYDEKANNVTSHWDDYANVGDLINNSEFMQFAGNGQADTEPDLYMFNFN
                     GRSGKFILIGDNAFLFPYQDIIIKRVGTYLKITTEDGTTYTFGTYGAQETTTVPETDI
                     SYISAWYLSKIESADLTDVIDFAYAPFATRPGLNSLSETYSVSFKVVNGCDLTAGGQG
                     WSAQWNLGGTVGAKRLIKITSKNAIIDFIPESTPRLDVGGAQYQNAYALKEIDFSNKS
                     GVLLKKAIFNHTYFPGNTQLKLSSLLIQGSYNQLSASENYSFSYQSETASFPKGTRGI
                     DKWGFYNGNDGNAMLFDETLGLNSYSYPLGDRTVNPTYCAQGILNKITYPTGGYTTFA
                     YENNRIDPAGATQYVHETRTAGDIVFYSGSNPYRSVSSTFTINEEQDVYIDYSRDISN
                     YPNGFLNTYNILTICKQNDQSACYNSPKVNKSESGNSAIVHLTPGTYTYTITCDQGVI
                     SSTAHIRYYWVNTSQIVYIPGPGMRIKTIKAYDNVSNSVPTMTKNYTYADATLLNSND
                     FGFNIIHHTETNTCVQENQTSCSLEGYNEFLYTSDYGNPLLTLVNDQFFYPQVTEINN
                     SQNGSGKTEYYFNAGGSLEALSVYLSKQNDYSYKNNQYILLKSSLTNTTLINPINFTA
                     FTCQLSEIASATGAGGCKMGGVDNPNLLDTIWRDRIYSAKIYNLVSAYNRTVYTKDIM
                     YDQDGLNPITTETDYFYDNPKFIAPTRCVTTNSKAQTITTLFKYPIDYGGSNCNTMHD
                     IIQTFKTARDGVSGDYQTCVQTRMVNATPYCPGYTFISVGGIAPLDCRTALRQYQCEQ
                     TYKTASASVKSALASNWVSVYNLCNGGSAAVAARRNKNIIDDPAEEISFVTKNNTDYF
                     LSALKTDYTSNGIYPKLLYSTKHAASDISLSAFNTSPNNYYDGKVNFVYDANNNLISQ
                     YKTNDVKLDYIWDYNNALPIAQVTWNKPASGDYSNYYAYTSFESDGKGKWSFLGPPIL
                     ATSPTGKYCYRLDNYDITISDLDPSQTYWLTYWTQNTSSYTINTTIGTKGKKVDGWTY
                     FEHQIQPAGGVITIHGTGNIDELRLYPKDAQMTTYTYEPLIGMTTQCDVNNKITYYDY
                     DGLGRLRLIKDQDKNVVKKICYNYAGEPMNCDASIFYNAEKSGTYYKNDCSPGYYGSA
                     VTYTVLAGKYSSTVSQSAANSLATSDKSANGPNYANSVGTCNQIVQVTPSCSNLASVS
                     GFTAVFTSLTTNITYTYNIASNGVLTAQGSTPATLPSGYYDLNISKANNNSIYVFKIN
                     CNLLIAGKSATFSNVEVQQWFCSVITIDLNN"
     gene            complement(5478..>6991)
                     /locus_tag="VEV83_02725"
     CDS             complement(5478..>6991)
                     /locus_tag="VEV83_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44052.1"
                     /translation="SRVYYYSSTQIVSMLLSAYVIRALFFQTVLLACSYYSAAGQTDT
                     SAGDLAGIATVSNKTLEDLQRRYVGLETKIHNHSVKALIRMQKKETDLKRKIQITDTI
                     KAAEIFTSGAQRQYTRLQTNTSLSHELNDFPLREYLPGVDSIQTSLTFLLQSKGLPAD
                     KLRQLQSLSNELKNLESELEYANEVDAFLKEREQLMRTAFINCGAGKQLSNINHQVYY
                     YEQQLAEYKALMNDKQKLKQKILTTIRDLPAFQSFWKKYSYLAALFPTPADYGTPQAL
                     TGLQTRASVQNLIAQRIGGAAATGVDPQQYFQGQVDAAQTQLNQLKERLDKLGTNTGG
                     SDMTMPDFKPNEEKTKTFAQRLEYGFNLQTAPAYYALPATSDFALTLGYKISDTKKFG
                     VGASYKLGLGSIQNIQLSSQGVGLRSYVDIKAKGSIWVSGGFEYNYLSAFNSIQDLQN
                     NIDVWQRSALAGLSKQYKIGKKREGTIQLLYDFLHNQQNPPGQALKFRVGYTF"
BASE COUNT         1853 a         1465 c         1450 g         2223 t
ORIGIN      
        1 ccgtttgcta aaccgatgtc ccaaattttc acattgtctg ctcccgcgcc tgttccagta
       61 ttggtcatat aaccagtact tactcctact gcatcgccaa cccagctatt tcctggtgca
      121 aaggtggcaa tctccctgtt caagggagac gcctcatagt ctgtccttcc ataaaagtat
      181 gcttcacccc ccggcgcatt acccggatta taaaatgttt tcaggaactc ttcctgttcc
      241 tgaaagggat ttaatttgaa agtcccgtca ctatgcccac tggaaacgta tggaagatat
      301 tttagtgttt cccgaccata tgcatcgtat agaaacggta ttacgttgtc atatcccaag
      361 ggactgctgc ccttagaaac agtttggagg ggcctcccga gtccatcaaa atattgggtg
      421 gtttgtttta cctcatcgag ggtattgtcg gtcgaaacaa gatccgcttc cgttgcaaac
      481 gatttcgttg cttcccaaac acgtatacta ttcacaggcg tcgttggcga ataagctact
      541 ggtttagtgg ctatactctc cgtcccggcg cctggctgag tttggctgcc cggtttttga
      601 gcttgtatcg gcgagaaaag aaatggacaa ctcaggcagg caacaaaaga gagaaaataa
      661 cgaaatttgt tcatgcagtc agttttattc agttctaaaa agtcattgat tgcttatttt
      721 atgaagtcgt cggttagtaa agattccgaa cttccgacgc catataactc acctgcttca
      781 tttattagat atttggttcc ggctcccata acatcctgat caaaatgtcc attcaaatct
      841 ttactagtta gccaggcaaa caggtcgctt tgatagggcg atgtttttct tgtattcatg
      901 ccctgggtga taactatgga atcgccagcc aaactcttat accatgtggt taagctttct
      961 aaagagtcgt cttgaaatcc gtcctcatat gaggggatcc caattatggc aatagtatcg
     1021 aacgtaacaa gggagtccat agcaataagc aacatcgaat cttgtgtggt tttgcttacg
     1081 ggcaacacaa ccaataaaac ttttttaccc cgatattgat caagagaaat atccttgcca
     1141 tccgctgtcg tgaccgaata gctgtaaaaa ttgttcacag atacaaatgc tgccaaaaag
     1201 ataaatccta cggatgcaat gatagttttc atgttttaat tgttaaggtc aattgtaatt
     1261 acactacaga accactgttg cacttcgacg tttgagaatg tagcagattt acccgctatc
     1321 aacaggttac agtttatctt aaatacgtag atgctgttgt tattcgcttt cgaaatattc
     1381 aaatcataat agccggatgg caatgttgca ggcgtgctcc cctgggcggt caagacgcca
     1441 tttgacgcta tgttataggt atatgttatg ttcgttgtaa gactggtaaa gactgcggta
     1501 aatccggata cgctcgcaag gtttgagcag gacggggtta cctgtacaat ctgattacat
     1561 gttccaacgc tgtttgcata atttggacca ttggcacttt tatcgcttgt agcaagagaa
     1621 ttggcagcgc tttggcttac cgttgaactg tatttcccgg ccaaaaccgt gtatgttacc
     1681 gcactcccgt agtacccggg tgagcaatca tttttataat aggtcccgga tttttcagcg
     1741 ttataaaaaa tagacgcgtc gcaattcatc ggctctccgg cataattgta acatatcttt
     1801 tttacgacat ttttatcctg gtcttttatc agccgtaacc ggcctaagcc atcataatca
     1861 taataagtga tcttattatt gacgtcgcat tgggtggtca ttccaattaa cggttcatat
     1921 gtgtaagttg tcatttgtgc gtccttagga tacagacgca attcgtcaat attgcctgtt
     1981 ccgtgaatgg taattactcc tccggcaggc tggatctgat gttcaaaata tgtccaacca
     2041 tcaacctttt tccctttagt gcctattgtt gtatttatgg tataagacga agtgttctgt
     2101 gtccagtatg taagccaata tgtttgtgat ggatcgaggt cgctaattgt tatgtcgtaa
     2161 ttatccagtc gataacagta tttgcccgtt ggactcgtcg cgagaatggg tggacctaaa
     2221 aagctccact ttcctttacc atcggattca aaagaggtat aagcataata attactgtaa
     2281 tcaccagacg ctggtttatt ccatgtcacc tgcgcaatag gaagcgcatt gttgtagtcc
     2341 cagatgtaat caagttttac atcgtttgtt ttatattggc tgattaagtt attgtttgca
     2401 tcatatacaa aatttacctt accatcgtag taattattcg gggaagtgtt gaatgctgag
     2461 agcgaaatat cagaggcagc atgtttagta gaatagagca attttggata aatgccgtta
     2521 gatgtgtaat cggttttcaa tgctgaaagg aaatagtcag tattattttt ggtcacaaag
     2581 cttatttctt cagccggatc atcaataata tttttgtttc tacgtgctgc aactgcagca
     2641 ctaccaccgt tacatagatt gtaaacactt acccaattac tagcgagggc agatttaacg
     2701 ctggcgctcg ccgttttata tgtttgctca cattggtatt gtcttaacgc agtgcgacag
     2761 tcaagaggcg caattccgcc taccgaaatg aaggtataac cagggcaata aggagtagcg
     2821 ttgaccatac gagtctggac acaagtttgg taatcgccgg aaacaccatc ccgcgcagtt
     2881 ttaaacgttt gaataatatc atgcatcgta ttacagttgc ttcccccata atctatcgga
     2941 tatttgaaaa gcgttgtaat tgtttgtgct ttgctgtttg tcgttacgca cctggtagga
     3001 gctatgaact taggattgtc ataaaaataa tctgtttcgg ttgtgatagg gtttaaacca
     3061 tcctggtcat acattatatc tttagtatac accgttctgt tgtacgctga caccaaattg
     3121 tatattttgg cactgtatat cctgtctctc catatcgtgt ccaatagatt cggattatca
     3181 acacctccca tcttgcaccc tcctgcacct gtagccgaag cgatttcgct caattgacaa
     3241 gtaaaggctg tgaaattgat cggatttatt agtgtagtat tggttagaga gcttttcaaa
     3301 agtatgtact gattattctt atagctgtaa tcattttgct tgctcaaata aacagaaagc
     3361 gcctctaaac ttcccccggc attgaaataa tattctgttt ttccgctccc attctggctg
     3421 ttatttattt cggtgacttg cgggtaaaag aattgatcgt ttacgagagt tagaagagga
     3481 tttccataat cggacgtata aaggaactcg ttataacctt ccagactaca cgaagtttga
     3541 ttttcctgga cacaggtatt tgtttctgta tgatggatta tattaaatcc aaaatcgtta
     3601 ctatttaaaa gcgtggcatc agcataggta taattttttg tcattgtcgg tacgctgttg
     3661 cttacattgt cgtaggcctt tatcgttttt atccgcatgc ctggtccggg tatataaaca
     3721 atttgtgacg tgttgaccca gtaataccga atgtgagcag tcgagctaat gactccctgg
     3781 tcgcaggtaa ttgtataagt ataagttccg ggtgtcagat gaacaatggc tgagtttccg
     3841 ctttcagact tatttacttt tgggctgtta tagcaggctg actgatcgtt ttgcttacag
     3901 atcgtaagta tgttgtaggt attaagaaat ccattcggat aattggatat atctctcgaa
     3961 taatcgatat aaacgtcttg ctcttcgtta attgtaaaag tggacgaaac tgagcgatag
     4021 ggattactac ctgaatagaa gacaatgtca ccggctgttc ttgtttcgtg aacatattgt
     4081 gttgctcctg caggatctat tctgttgttt tcatatgcga acgtagtata tccgccagtt
     4141 gggtaagtaa ttttatttaa gataccctgc gcacagtagg tcgggttaac ggttctatcg
     4201 cctaaagggt aactataaga attcagtccc agtgtttcat cgaatagcat tgcattacca
     4261 tcgtttccat tataaaatcc ccatttatca atacccctcg tgcccttagg aaaagaagcg
     4321 gtttcgcttt gataggaaaa actatagttt tcggaggcac ttaattgatt ataactgccc
     4381 tggataagga gagaagaaag tttaagctgg gtattacccg gaaaataagt atgattaaag
     4441 atcgccttct taagcaacac gccactttta ttgctaaagt caatttcttt caacgcatat
     4501 gcattttgat actgagcgcc accaacgtct aaccttggag ttgattccgg aataaaatct
     4561 ataattgcat ttttcgaggt aattttaatt aaccttttag ctccaacggt accgccaaga
     4621 ttccactgag cactccaacc ctgtcctccc gccgtgagat cacatccatt taccactttg
     4681 aagctcaccg aatatgtttc cgacagacta tttaggccgg gacgggtggc aaaaggagcg
     4741 tatgcaaagt caataacatc ggttaagtcc gccgattcga ttttagaaag ataccatgca
     4801 gagatataag agatatcagt ttcaggaact gttgtggttt cctgcgcgcc gtacgttcca
     4861 aaagtatacg ttgtgccatc ctctgtcgtt attttcaaat aagtgccaac tcttttaata
     4921 attatgtctt gataggggaa taaaaaagcg ttatcaccaa ttaaaataaa ctttccggag
     4981 cgcccgttaa aattgaacat gtagagatct ggttctgtgt ccgcttgccc attgccggca
     5041 aactgcataa actcactgtt attaataaga tctcctacat tagcatagtc atcccaatgg
     5101 gatgtaacat tgttcgcttt ttcatcgtat agccctttta caattcttgt tataacaccg
     5161 cccgcttcta cattccatcc cattccaatc cagcttgcat cctggttagg ttgatagcca
     5221 ttatagttat aagatagaac gataggcaaa tgaagttttg tggattttaa atcgattatt
     5281 gggatcgata cattcggcaa gcccgtatat agtgttaccg gcgtaagccc gttctttaca
     5341 aaagcaacta catcgggcgt cggagcgatc aagctttcgt ttaactgtgg ttgctgtcca
     5401 acggatcgaa tgcacacgag caaaaaatag atcacacaaa taataggagt tcttataaat
     5461 ctcataaagc aatgttttta aaaggtgtat cccacccgaa atttcaatgc ctgacctggc
     5521 gggttttgtt gattatgtaa aaaatcgtac agcagctgaa tagtaccctc tcttttcttg
     5581 ccaatcttat actgcttgct cagtccggcg agtgcgctac gctgccatac atcaatatta
     5641 ttttgcagat cctgaatgct gttgaatgcg ctcaggtagt tgtattcaaa cccgccactc
     5701 acccaaatac tacccttcgc ttttatatcg acataacttc ttaatccgac accctgactt
     5761 gatagttgaa tgttttggat gcttcctaaa cccaacttgt aactggctcc gactccaaac
     5821 ttttttgtat cacttatttt atacccgagc gtcaaagcaa agtcactcgt cgcaggaagt
     5881 gcatagtatg caggagcggt ttgcagattg aaaccatatt ccagtcgttg cgcgaacgtc
     5941 tttgtctttt cttcatttgg tttgaagtcg ggcatggtca tgtcgctgcc accagtgttt
     6001 gttccgagtt tatctaatct ctccttcagt tgattaagtt gtgtttgggc cgcatctacc
     6061 tgtccttgaa aatattgttg cggatctaca ccggttgcgg cagcaccgcc aatacgttgc
     6121 gcaatcagat tttgaacgct cgctcttgtt tgcagaccag tgagtgcttg tggtgtgccg
     6181 taatctgctg gcgtgggaaa aagagcagcc aggtagctat actttttcca gaatgattga
     6241 aatgccggga gatctctaat ggtcgttaat atcttttgtt ttaatttttg tttatcgttc
     6301 atcagcgctt tgtattccgc aagctgctgc tcataataat atacctgatg attaatattc
     6361 gatagctgct ttccggcgcc gcaattaatg aatgcggttc tcattaactg ttcccgttcc
     6421 ttcaggaagg cgtccacttc gtttgcatat tctaactcgg attccaggtt ttttaactca
     6481 ttgctgagag attgcagttg ccttaatttg tcggccggaa ggcccttgct ttgcaacaaa
     6541 aaagtcaagc ttgtttggat gctgtccacg ccgggcaaat attccctgag cggaaaatcg
     6601 tttaactcgt gtgatagact cgtgttcgtc tgcagtcttg tgtattgacg ctgcgcgcct
     6661 gaagtaaata tttctgccgc ttttattgtg tcagtgattt gtatttttct ttttaggtcg
     6721 gtttcttttt tctgcattct gatcaaagcc ttaaccgagt gattatggat cttcgtttcc
     6781 aacccaacat atcgtctttg aaggtcttca agcgttttgt tgctgacagt tgcgatgccg
     6841 gccaaatcgc ctgctgaggt atcggtttgg ccggcggcag aataatagga acaggctaac
     6901 aggactgttt ggaaaaaaag ggcacgaatt acgtaagcag ataacaacat acttacaatt
     6961 tgggttgaac tgtaataata aactctcgaa a
//
LOCUS       DASQJI010000086         3556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2309752,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000086 DASQJI010000000
VERSION     DASQJI010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3556
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309752"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..754
                     /locus_tag="VEV83_02730"
     CDS             116..754
                     /locus_tag="VEV83_02730"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44053.1"
                     /translation="MPIRVCIFDDNKNILQSLQLLLHGNNEIEVTGVYENANNIEEAL
                     IVSEPDVVLMDIEMPGINGIEAVLEIKKFNAGITVIMQTIFEDEDRIFSSILAGASGY
                     LTKDSPPLAIIQAVEDAHKGGTPMSPCIAKKIIQQFQRQNKGVSAGEYNLTAKETEVL
                     RLLADGLSYKMIADKLNMRYDTAHTHIKSIYRKLHVASMGEAISKAIRGKII"
     gene            1058..2650
                     /locus_tag="VEV83_02735"
     CDS             1058..2650
                     /locus_tag="VEV83_02735"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK44054.1"
                     /translation="MKTKSIFMTACCLFLVATSFTQNRTSSRKITSAPFWTLMGNSGT
                     DTAKNFIGTTDAQPLLFKVNNQKAGFLDFSDLSHNTAFGYQTLINDVVSNVQDATGAN
                     NSAFGYFALLSNTSGEINTAHGAGALFANTTGNANTSTGAFSLFSNTTGGYNTATGDF
                     ALVANTTGSANIANGTSLYSNTEGSDNIASGVLALGSNTTGNANIAFGTFSLGANVTG
                     SNNTAVGFGTDVTADNLMNATAIGNGALVDASNKVRVGNTDVTSIGGQVSWTNFSDER
                     IKDNIKENVPGLEFIKALRPVTYHVSIAKENALLGVKDINAKPITIPELKNGIKIPPM
                     ENLAGYKTRNIKSNDKHDIEKMEFTGFLAQDVDKAAKSIGYDFSGIDNSGKIMGLRYS
                     DFVVPLVKAVQELSKMNDDKDAKIDGLQKQIDELKAMITSNNTTAKTNVTVSDASLEQ
                     NMPNPFIKTTTIGYTLPQKFSNAQIVVTDKNGKLLKQINISGSGKGTATVDAATLTPG
                     SYNYSLVVDGRQISSKQMVLTR"
     gene            complement(2839..3510)
                     /locus_tag="VEV83_02740"
     CDS             complement(2839..3510)
                     /locus_tag="VEV83_02740"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HYK44055.1"
                     /translation="MHKIVQPAILYFGTPVVLISTINEDRSYNLAPISSVFWLGWRCV
                     IGISAFSKTTENIIRTGECVLNMPSSNQADIVNRLAKTTGSNPVPEGKKLKGYRYERN
                     KFSVAGVTGLKADKVHVLRVKECPVQLEAKLVTKHKLAEDDILQNGRILTIELRIVRV
                     HVDESLLMEGYINRIDPNKWRPLIMSFQKFYGLGPEVHYSTLAEIPEELYKSPDMERA
                     EMMLS"
BASE COUNT         1147 a          719 c          717 g          973 t
ORIGIN      
        1 ggaactgaaa taattttgga ggttcctcta accaatattg gcgattagtt aaacgtgtta
       61 ataaaaacta acttacaaca gaattttttg aagcaacaaa atcgcgacaa gtgtaatgcc
      121 tataagggtt tgcatatttg atgacaataa aaatattctg caatcgttac agctgttgct
      181 acacggcaat aacgaaatag aagtgaccgg cgtctatgaa aatgcgaata acatagaaga
      241 ggccttgatt gtaagtgaac ccgatgtggt actgatggat attgaaatgc cgggcattaa
      301 tggcatagaa gcggtgttgg agataaaaaa attcaatgca ggtattactg ttattatgca
      361 gacgatcttt gaggatgaag atcgtatctt cagttccatt cttgcggggg cgagcggcta
      421 ccttacaaaa gactcacctc cgcttgctat catccaggca gtagaggatg cacataaagg
      481 cggcactcct atgtctccat gtattgctaa gaaaataatc caacaatttc aacggcaaaa
      541 caaaggcgtt tcagcaggcg agtataatct tacagctaaa gaaacagaag tgctgcgact
      601 attggccgac ggccttagtt ataaaatgat tgctgacaaa ttgaacatgc gttacgatac
      661 tgcacacaca catatcaaat cgatctaccg caaactacac gttgccagta tgggcgaagc
      721 cattagtaaa gccattcgcg gtaaaataat ctaaggtttg ttgacacggt agttttttgc
      781 ctgcgatctt ctgcaattcg aaatttttca aggataatat tcaggggttt ggaaaattgt
      841 aatctcaaag aataatccat gcaccggttc taatctccat tgaaatttat ctacccacaa
      901 ttggcgattg tagcatttgt tattcgaaac tacttttaca atatagtctt tgcgggcatt
      961 actagtaaac gttgcaagtc taagaaagca ttttttaagt gcggcaaatt gtaatcgatt
     1021 ttccacgtat catttcattt taaaaaaaaa tattattatg aaaacgaaat ctattttcat
     1081 gacagcgtgt tgtttgtttc ttgttgcaac atcatttact cagaaccgta cctcttcaag
     1141 aaaaataaca agtgctccct tctggacgtt aatggggaac agtggcactg acacggccaa
     1201 aaatttcatc ggtacaaccg atgcgcagcc tttgttattt aaagtaaaca atcaaaaagc
     1261 gggcttcctt gacttcagcg atcttagcca caacacagca tttggatacc aaaccttaat
     1321 taacgatgta gtatccaacg tgcaagatgc taccggagct aacaacagcg ccttcggtta
     1381 ttttgctttg ctctccaata cgtcaggtga aataaatacg gctcacggcg ccggcgcact
     1441 cttcgcaaat accaccggaa atgcaaatac ttcgaccgga gccttctcac ttttttcaaa
     1501 tacaaccggc gggtataata cggcaaccgg agattttgcg cttgttgcca acacaacagg
     1561 atccgctaac atagcaaatg gtacatcgct ttattctaac acagagggct ccgataatat
     1621 agcatcaggt gtgttagcgc taggatcaaa cacaaccgga aatgctaata tcgcgtttgg
     1681 cactttctca cttggtgcta acgttacagg aagtaataat acggccgtgg gttttggcac
     1741 agatgtaacc gcagacaatc tcatgaatgc tacagccatc ggtaatggtg ctttagtaga
     1801 tgcaagcaac aaagtgcggg ttggtaatac tgatgtaacc agcataggcg gacaggtaag
     1861 ctggacaaac ttttctgacg aaagaataaa agataacatc aaagaaaatg tgcccggact
     1921 tgaatttata aaagcacttc gcccggtaac gtatcacgta agtattgcaa aggaaaatgc
     1981 attactgggt gtaaaagata taaacgcgaa accaattacg attccagaac taaaaaatgg
     2041 aattaaaata ccgccgatgg aaaatttagc aggttacaaa acaagaaata ttaaatctaa
     2101 cgataagcat gatatagaga aaatggagtt caccggcttt ttagcacagg atgttgataa
     2161 ggctgcaaag agtattggtt atgatttttc gggtattgac aattcgggaa agatcatggg
     2221 cttacgctac agtgatttcg tagtgccgct tgtaaaagca gtacaggagc tttcgaaaat
     2281 gaatgacgat aaagatgcaa agatcgatgg actacaaaaa cagatcgatg aattaaaagc
     2341 aatgatcacc agcaataata ccaccgctaa aacgaatgta acggttagtg acgcttccct
     2401 ggaacaaaat atgccgaatc cttttattaa aacaacaacc attggttata cgctaccaca
     2461 aaaattttcg aatgcccaaa ttgtggtcac tgataaaaat ggaaaactgt tgaaacagat
     2521 aaatatttct ggcagcggaa agggaactgc aactgtagat gcagctacgc ttactccggg
     2581 atcttacaat tattctttag ttgttgatgg acgacaaatc agctcaaaac aaatggtttt
     2641 gaccagataa aatttcttgc aatcgttttt cctggctgca gagttttttc ctcgtttgac
     2701 aaaagactct gcagtttaat aaaaaaaatc ttgaaaaatt cccgcgttgc aacgatgagt
     2761 aaacgcggaa ataaaagcaa aaagaatagc aacaatcagg tatagacgtt atttcgcata
     2821 cacctacaag cggcgcgatc aggataacat catttcggct ctttccatat cgggtgactt
     2881 atacaattcc tcgggtatct cggcaagcgt tgagtaatgc acctccggtc caagtccata
     2941 aaacttttga aaactcatga taagaggccg ccacttgttt gggtcgatcc tgtttatgta
     3001 cccctccatt aagagagatt catcaacatg taccctgaca attctcaact ctatcgttag
     3061 gatgcgacca ttttgcaaaa tgtcatcttc ggctaacttg tgtttcgtaa ccaactttgc
     3121 ttccagttga acaggacatt cttttacgcg cagaacgtgc actttatcgg ctttcaaccc
     3181 ggtgactccg gcaacggaaa atttgttccg ctcatatctg taccctttca gcttcttgcc
     3241 ttcaggaacc ggattggaac ctgttgtttt tgcaagtcga tttactatgt ctgcctgatt
     3301 agaagaaggc atgttgagaa cacattcacc ggtgcgaata atgttttcgg tagtctttga
     3361 aaatgcgctt attccaatta cacatcgcca gcccagccaa aacactgacg atatcggtgc
     3421 aaggttgtat gaccggtctt cattaattgt actgattaaa accaccggcg ttccaaaata
     3481 taaaatagca ggttgaacaa ttttgtgcat gattcaatta tttgcaacaa aattctattg
     3541 acactgcaac ccgtaa
//
LOCUS       DASQJI010000087         2315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2923986,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000087 DASQJI010000000
VERSION     DASQJI010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2923986"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VEV83_02745"
     CDS             <1..346
                     /locus_tag="VEV83_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HYK44056.1"
                     /translation="LKEQFNWLWVGFYLVKNEELVVGPFQGPVACTRIKKGRGVCGTS
                     WAEARTLIVPDVEKFPGHIACSSLSRSEIVVPVIRNNEVVAVLDVDSEMIDHFDTTDE
                     KYLKQVLDEITF"
     gene            complement(343..1002)
                     /locus_tag="VEV83_02750"
     CDS             complement(343..1002)
                     /locus_tag="VEV83_02750"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HYK44057.1"
                     /translation="MTIHREGYRIIGISVLFFGLINLLAFYFFADNLRWLAFFVLLAS
                     FCLLLFILFFFRIPKRNLTFAENKIVAPADGKVVVIEEITDEEYFHDKRIQLSIFMSP
                     VNVHINRVPVSGTVVYDNYFEGKYLVAWHPKSSTHNERHTMVLQNSNGLIMVKQIAGA
                     LAKRICNYAQPGKHFEQGEEFGFIKFGSRVDVLLPTDAKIEVQLGQTVRSGVTVIASF
                     N"
     gene            complement(1046..1918)
                     /locus_tag="VEV83_02755"
     CDS             complement(1046..1918)
                     /locus_tag="VEV83_02755"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HYK44058.1"
                     /translation="MALQLQTFRTRTLTAIVFVVIMLGGMLVSPWSFLLLFSIIHVGC
                     WIDYQKLAGLIDPDYRHISTFHKYGVILAGFGFMLWMTNDVYAIGSVKLSELGWFLMM
                     VVLIALPINEILLSRQFKLKIIFTSLAGLLYISLSCGLMIALRSEGIIFGSLFSLDLG
                     LILPLLLIGTIWVNDTMAYIVGSLVGRTPFSSISPKKTWEGTIGGAVLAIAGITALAF
                     GLFQADVPQVLFVTAIACISGILGDLLESKMKRSAGVKDSGNIMPGHGGFLDRFDSLL
                     VATIFVWIYVKLFM"
     gene            1963..>2315
                     /locus_tag="VEV83_02760"
     CDS             1963..>2315
                     /locus_tag="VEV83_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HYK44059.1"
                     /translation="MNLLGNLVWLICGGFFTAIGYFVTGFVFCVTIIGMPFGIQCFKI
                     GLLELMPFGKKVVPTSSSGGCLALLFNIIWILTGGLYTAIVHLVFAFILFITIIGIPF
                     GRQHLKLVELSLAPFG"
BASE COUNT          673 a          523 c          516 g          603 t
ORIGIN      
        1 attaaaggag caattcaact ggctgtgggt tggattctat ttagtgaaga atgaagagct
       61 cgttgtgggt cccttccagg gaccggtagc ctgcacaaga attaaaaaag gaagaggtgt
      121 gtgtggaaca agctgggcag aggccaggac gctcattgta ccggatgttg aaaaatttcc
      181 gggccatatc gcctgcagca gtttatcccg gtctgagatc gttgtgcctg tcatacgaaa
      241 caatgaggtg gtcgcggtgc tcgatgttga cagtgaaatg attgatcatt ttgatacaac
      301 ggatgagaaa tatctgaaac aggtgctgga tgaaataact ttttaattga acgaagcgat
      361 cacggtaaca ccacttctaa cagtttgccc aagctgcact tcgatctttg catcggtcgg
      421 taataataca tctacgcggc ttccgaattt aatgaagccg aattcttctc cctgctcaaa
      481 atgttttccg ggctgagcgt agttgcagat ccgtttcgca agcgcgcccg caatttgttt
      541 aaccatgata aggccattcg aattttgaag caccatcgta tgcctttcgt tatgtgtgga
      601 cgacttggga tgccatgcaa cgaggtattt gccttcaaaa taattgtcat acacaaccgt
      661 tccgctcacc ggcacgcggt taatatgaac gttgaccggg ctcatgaaaa tgcttaactg
      721 aattcgcttg tcgtgaaaat attcctcatc ggttatttct tcgatgacta ccactttacc
      781 gtcggctggt gcaacgatct tattttcggc aaacgtgagg ttgcgtttgg gtatcctgaa
      841 aaaaaagaga atgaaaagca gcaaacaaaa gctggcgagc aaaacaaaaa aggctaacca
      901 ccgcaaatta tctgcgaaga aataaaatgc caacaggttt attaatccga agaaaagcac
      961 gctgatgccg ataatcctgt atccttcacg gtgaatcgtc ataaattcaa ataactgcaa
     1021 atatacagac cggccgagag ggctcttaca taaatagttt cacatagatc cagacaaaga
     1081 tcgtagccac taagagagag tcgaacctgt caaggaaacc gccgtgaccc ggcatgatat
     1141 ttccgctgtc tttgacacca gcgctgcgtt tcattttact ttccagcagg tcgccgagta
     1201 ttccgctgat acaagcaatc gcagtaacaa aaagaacttg tggcacgtcc gcttgaaaaa
     1261 gtccgaaggc cagcgccgtg attcccgcaa tagcaagcac tgcaccgcca atcgttccct
     1321 cccatgtttt cttaggtgaa atggatgaga atggagtccg tccaaccaat gaaccaacaa
     1381 tataagccat cgtatcattt acccagatcg taccgataag caacaagggc aaaattaaac
     1441 cgaggtcgag gctgaacagg ctgccaaaaa ttattccttc ggaccgaagg gcgatcatca
     1501 agccgcaact caacgagata tagagcaagc cggcaagcga agtaaaaatg attttcaatt
     1561 tgaactggcg gctaagcagg atctcgttga tgggtaaagc aatgaggacg accatcatca
     1621 aaaaccatcc aagctcacta agcttcaccg agcctattgc ataaacatca ttcgtcatcc
     1681 ataacatgaa tccgaatcct gcgagtatca ctccatactt atgaaaggtt gaaatgtgcc
     1741 ggtagtcggg atcaattagt ccggccaatt tttggtaatc tatccagcat ccaacatgta
     1801 ttatggagaa aagtaaaaga aaactccagg ggcttaccag cattccgcca agcatgatga
     1861 caacaaacac aattgcagtg agtgttcttg tcctgaatgt ttgcagttgc agagccatca
     1921 aaattaaaaa tgaagatatt caaaactctt tatttttaaa caatgaacct gctcggcaac
     1981 ctggtctggc tgatctgcgg aggattcttt acggcaatcg gttactttgt aacaggcttt
     2041 gttttttgcg tcacgataat agggatgccg ttcggcattc aatgttttaa aataggcttg
     2101 cttgagctca tgcccttcgg caagaaggtt gttccaacgt cgtcgtcagg cggatgcctc
     2161 gctcttcttt tcaatataat ctggatactc acaggtggcc tttacaccgc gatcgtgcat
     2221 ctcgtatttg catttattct cttcattacc atcattggca ttccattcgg acgacaacat
     2281 ttgaaattgg ttgaattgtc ccttgcgccg tttgg
//
LOCUS       DASQJI010000088         9149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_467083,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000088 DASQJI010000000
VERSION     DASQJI010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9149
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467083"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..3375
                     /locus_tag="VEV83_02765"
     CDS             112..3375
                     /locus_tag="VEV83_02765"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK44060.1"
                     /translation="MKKFTFLVALIMIIASTRTSVKAQWNISGSDIYNSNAGNVGVGT
                     AGVTSASSILEVRSTTKGVLIPRMTKAQRDAIISPATGLLIYQTNSTPGFYYYSGTAW
                     TAVSPKGVNKTLSNLTAPTAVNVDLLPGTANTLDLGSSTYSWKNINIVGDINRLGQRF
                     LSISGTGNAFFGINSGINNTASFNTFLGYQAGISNTTGTENFFGGYNAGNANSTGSYN
                     SFAGGAAGALNTTGSFNSFYGGGAGLSNTSGNNNIFFGARAGLQNLAGNGNIFIGTAA
                     GYGSNQNNLVFIGDSSGFANGAGIALTAVGPGSLRSNTSGTNNSAFGNSALYSNTTGS
                     SNSAFGQYSLKYNMTGSWNTAVGLASLYSNASGASNTALGSYSLYQNMDGTGNTAVGT
                     SSLYNNTNGSGNTAIGMSAMYSNKTGFQNTAVGSSSLEAVTSGFNNTALGYHALYDDT
                     SGSLNTAVGNLALSNNTNGSNNVAIGNNALSTNTTGKYNTAQGMNALNGNTTGDRNTA
                     NGYTALYWNTLGYSNTASGYAALFSNTTGHNNVSYGDSSLYFNTVGNYNTAIGNVSLL
                     NNTTGSNNTSMGHASLDDNTTGISNTAIGQGSLSESTTGNYNTAVGDLALVGLNTGSH
                     NVALGHAALALTIGNSFNVAVGDSSLYSYNDGTVLAYNVAVGHASTKKTTTGSSNSAL
                     GAFSLYNNTTGFANSAFGYSALASNTTGSSNSAFGHNAGFTCNGTANSYFGWKAGFAN
                     ISSNDNAVFGYDAGSSATGGENAFFGSYSGHNVTTGTRNTYIGRQADGSVTTLTNSTA
                     IGYAALVNASNKIRFGNASVTVVEGAAAYTVSDKRFKSNIKEDVIGLKFINKLRPVIY
                     NFEAGKFDEFLQKNLPAEAKEKLKGIDHKKAESLRRSGFIAQEVETIAKEVGYDFDGV
                     HVPENDDDNYSIAYAEFVVPLVKAVQELSASNDTKDAKIDAQQKRIDHLELMMLQMQQ
                     SIQTLQSCSPCNDGNTSVQNQSSVIVSNDAASLQQNVPNPFNHTTSIAYSLPQKFASA
                     QLIVTDKTGKMIKQVQLKEAGKGVVNLDAATLSSGAYHYTLYVDGKMIDSKQMEHIK"
     gene            complement(3701..4219)
                     /locus_tag="VEV83_02770"
     CDS             complement(3701..4219)
                     /locus_tag="VEV83_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HYK44061.1"
                     /translation="MFLQLYWIYDMSKNKKHFGLLALAVFLFIVSFDASAQQGKLPPF
                     RIMQSNGTIFKAEQLPFEKPILIIYFSPDCDHCQAFMKDFFKSAADFKKASVVMVTYR
                     PIADVTKFVADFGVNKYSNIYVGTEGSSFFLKNYYKLLDMPFAALYDKNGNIMTSYRS
                     NISLNELALKIK"
     gene            complement(4220..5701)
                     /locus_tag="VEV83_02775"
     CDS             complement(4220..5701)
                     /locus_tag="VEV83_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HYK44062.1"
                     /translation="MRFCTIILISVLFHQALFGQTKYSEQYRPQIHFSPRAHWMNDPN
                     GMVYNDGVYHLFFQYYPDSTVWGPMHWGHAMSSDMIHWKEQPIALYPDSLGYIFSGSA
                     VVDIHNTSGFGKDGKAPLVAIYTSHNIAGERGGRNDFQTQSIAYSLDNGNTWTKYEGD
                     PVIKNPGIKDFRDPKVMWYEEQKKWIMILAVHDHVSFYSSPNLKIWTKESDFGENIGA
                     HGGVWECPDIFSLADNGKKVWVLISSMNPGAPNGGSGTQYFLGSFNGKVFTPFDTTTK
                     WIDYGPDDYAGVTWSNTGDRKVFLGWMSNWDYGKVVPTVEWRSAMTIPRELRMEHVDD
                     RIFLASKPVRELDEISFDRSTMDNIEETSRKLSIPGRIDLDIENANDFSITLSNDNGE
                     EVVIGFDKKQNQYFINRRKSGNVAFYKSFAARHTAPRLAPGKNINMSLIIDVASVELF
                     ADDGLTVMTEIFFPSKPYDQLHVRSTVPIKKISFSALESIWHN"
     gene            complement(5705..7018)
                     /gene="der"
                     /locus_tag="VEV83_02780"
     CDS             complement(5705..7018)
                     /gene="der"
                     /locus_tag="VEV83_02780"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HYK44063.1"
                     /translation="MSFTIAIVGRPNVGKSTLFNRLLEQRKAIVDNISGVTRDRQYGV
                     ADWNGKTFNVIDTGGFVPDSEDIFETEIRKQVSIAIEEANAIIFMTDVSTGITSLDES
                     MAELLRRATKPVFLVVNKVDNHERQLDATEFYSLGFDNIFFVSSMTGSGSGELLDEVA
                     KLISTENAEETGEENQLPRFAIIGQPNVGKSSLLNALVGAERTIVSEIAGTTRDTIHT
                     HYNLFQKDFVLIDTAGLRKKNKEKDDLEFYSVIRAIKAMDEADVCLLILDAQKGISAQ
                     DVNIFSLAARKGKGIVLLVNKWDLVEKSTNTAKDYERQLKEKIAPFTDVPVLFISAKE
                     KTRIFKAMETALQVYENRKQHVPTSRLNEVMLKAVEAYHAPVVRGHTVKIKYITQLPT
                     VVPSFAFFTNYPDDIKTPYKNYLENQLRSSFNFIGVPVRIFFRKK"
     gene            complement(7030..7770)
                     /locus_tag="VEV83_02785"
     CDS             complement(7030..7770)
                     /locus_tag="VEV83_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44064.1"
                     /translation="MQNNTWLRTAFTVILFCVTVYLRGQVFIEQTPTPKSADPVINMY
                     GSGNLIVSIPYEKVKGSAFWKDDYELANLYGTNARSKWFCRSRLNLVSGEVYFLDKNN
                     QELVANDPINLIIFYKGGDTTVTDAVFVNVTIYPDLIQTKELTSGYLQVLNTGKYQLL
                     KYYKRTVASADSLFGTVKRYYFVTQNRYFISGNQKIEPIKRLTKENVLPDIPASTSCS
                     DWIAQNKIDFRKEEDVVKFLNYYNSKNQ"
     gene            complement(7796..8665)
                     /gene="era"
                     /locus_tag="VEV83_02790"
     CDS             complement(7796..8665)
                     /gene="era"
                     /locus_tag="VEV83_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HYK44065.1"
                     /translation="MKSGFVNIFGKPNAGKSTLLNALVGEKLAIVSSKVQTTRHRIKA
                     FLTEPGDYQIVFSDTPGILDPKYKLHERMMRNVKNAVEDADVALLLADSTADADENIA
                     AFKKIRIKVPCILVLNKIDKLSNKKVEAIAGHYQQSLPCKKVVAVSALNKLNLDELLS
                     SIIDLLPEGEPFYNEDDLSDLPSKFFVSELIREKIYELFGDEIPYQTAVVVNEFREKT
                     TLTKIQADIIVQRESQKAILLGKDGSMIKRLGSIARTDIESFLERKIFLELFIKVRPK
                     WRDSDIHLKEYGY"
     gene            8723..8878
                     /locus_tag="VEV83_02795"
     CDS             8723..8878
                     /locus_tag="VEV83_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44066.1"
                     /translation="MLYACSYGVWWFPTKLSGAKGDAVSKEPRADLLDDTDFFSNKQI
                     NGSNVRL"
BASE COUNT         2573 a         2033 c         1937 g         2606 t
ORIGIN      
        1 aaggctattc acaaccgcat tgtatagcgc acacatcgca tcatcatgcg attgcccaaa
       61 cctttttctt agcgcagctt tacatgataa ttaaatccaa aaagaattat catgaaaaaa
      121 tttacttttt tggttgcgct gataatgatc attgcaagta cgcgtacttc cgtaaaggca
      181 caatggaaca taagcggcag tgatatctat aacagcaatg ccggcaatgt tggtgtgggg
      241 acagcaggtg taaccagtgc ttcatccatt ttggaagtgc gcagtacgac aaaaggagtt
      301 ttgataccaa ggatgacgaa agctcaacgt gatgcaatta tatctccggc aacaggcttg
      361 ctcatttatc aaaccaacag cacgccggga ttctactact acagcggcac tgcctggact
      421 gcagtctccc ctaaaggagt taacaaaaca ctgagtaacc ttacggcccc cacggccgtg
      481 aatgttgacc ttttaccggg aacagcgaat accctcgacc tgggaagttc aacctattcc
      541 tggaaaaaca ttaatatagt tggagacatt aatcgtctcg gtcaacgttt tctaagcatc
      601 tcgggaacgg gaaacgcttt cttcggcatc aactcgggca ttaacaatac tgcatcattc
      661 aatacatttt taggttacca ggctgggatt tcaaacacca ccgggacaga aaattttttt
      721 ggaggatata atgcgggtaa tgcaaactct accgggagtt acaacagttt cgctggcggc
      781 gccgcaggag cattaaatac aaccggcagc ttcaattctt tttatggagg tggtgccgga
      841 ctttcaaata ccagcggtaa taataatatc ttttttggag cccgcgcggg acttcaaaac
      901 ctggctggga atggcaatat ttttatagga actgccgcag ggtacggctc gaaccagaat
      961 aatctcgtat ttattggcga tagcagcggc ttcgcgaatg gcgccggaat agcattaacc
     1021 gctgttggcc cgggttcatt acgttcaaat acgtcaggca caaacaatag cgcttttggt
     1081 aatagtgcgc tttatagcaa tacgaccgga agttctaata gcgccttcgg acaatacagt
     1141 ctgaagtata acatgactgg atcatggaat actgcggttg gccttgcaag tttatacagt
     1201 aatgcatcag gcgcctccaa tactgcgctc gggtcatatt ccctgtatca aaatatggat
     1261 ggtacgggca atactgctgt tggaacatcg tcattgtaca acaatacaaa tggtagcggc
     1321 aatacggcaa ttggtatgtc tgctatgtat tccaataaaa cgggttttca gaatacggct
     1381 gtcggcagta gttcgttaga agcggttact tctggtttca ataacactgc gcttggttac
     1441 catgcgcttt atgacgatac aagcggaagt ctcaatacgg ccgttgggaa tcttgcatta
     1501 tcaaataata cgaatggcag caataatgtt gccattggca acaatgcgct ttctacgaat
     1561 actaccggaa aatacaacac agcccagggc atgaatgcgc ttaatggaaa taccacagga
     1621 gacagaaaca cggctaatgg atacacagca ctatactgga atacactcgg gtatagcaat
     1681 acggcttcag gttatgcagc tctgttttca aacactacgg gtcacaataa tgtctcatac
     1741 ggagacagct cgttatattt taacactgtc ggaaactata atactgccat tggaaatgtt
     1801 tccctgctga ataacacaac gggcagcaac aatacttcca tgggtcatgc ttcgctcgac
     1861 gataacacca cgggaattag caacacggcc attggccagg gtagcttatc agaatctact
     1921 acgggaaatt ataacacggc tgtaggcgat ctggcactag ttgggctgaa tacgggcagc
     1981 cacaacgtgg ctcttggaca cgcagcactg gcattaacta taggaaacag ttttaatgtg
     2041 gctgtcggcg attcttcact gtattcttac aacgacggaa cagttcttgc ctacaatgtt
     2101 gctgttggcc acgcctctac gaaaaagacc actacagggt catcgaattc agcgcttgga
     2161 gcgttttctc tttataacaa tactacaggt tttgcaaatt cagcatttgg atattcggca
     2221 ctggcaagta acacaaccgg ttcgtctaac tcagcgtttg gacacaatgc aggattcact
     2281 tgcaatggca cagccaattc atattttggc tggaaagcag gctttgctaa catttcttct
     2341 aatgacaatg ctgtttttgg ctacgatgcc ggttcttctg caaccggcgg agagaatgca
     2401 ttctttggct cgtattcggg tcataacgtg accacaggaa caaggaatac ttacatcggc
     2461 cggcaggcag atggcagtgt aacgacactg accaattcaa ctgccatcgg atatgcagcc
     2521 cttgttaacg caagtaataa aataagattt ggaaatgcat ctgtaacggt agttgaaggt
     2581 gcggcagctt atacggtttc agataagcgc tttaaatcaa acataaaaga agatgtgatt
     2641 ggattaaaat tcatcaacaa gctgcgtccg gtgatctaca attttgaagc aggaaaattt
     2701 gacgaatttc ttcaaaagaa tcttcccgct gaggcaaaag aaaaactaaa gggtattgat
     2761 cataaaaagg ctgaaagcct gcgccgaagc ggttttattg cacaggaagt agaaaccatt
     2821 gccaaagaag tgggatatga ttttgatgga gttcatgttc cggaaaatga tgatgataat
     2881 tacagtattg cctatgcaga atttgtagtg cctcttgtaa aagctgtcca ggaattatcc
     2941 gcatcaaacg ataccaagga tgcaaagatc gatgcacagc aaaagcgaat cgatcatctc
     3001 gaattgatga tgcttcagat gcagcaatca atacaaacat tacaaagttg cagtccgtgc
     3061 aatgatggga acacttcagt gcaaaatcaa tcttctgtca ttgtttcgaa cgatgcggct
     3121 tctttgcaac aaaatgtgcc gaatcctttc aatcatacga cttcaattgc gtattcattg
     3181 ccgcaaaaat ttgcgagcgc acaattgatc gtcacagata aaaccggaaa aatgataaag
     3241 caggtgcaat tgaaagaagc aggaaaaggt gtggtgaatt tagatgctgc tacgctttca
     3301 tcaggagcgt atcattatac cttgtatgtg gatggaaaga tgatagactc gaagcaaatg
     3361 gagcacatta aataaaaaac agatccgcga catcccgaga gtgatagcga atcgggatga
     3421 ttttggcgaa gtagaaacaa aaacagttaa aaccatcgcg atctggatgt gcgccttgga
     3481 ttttttacgg atgattttga caaaataaaa aaatatttag cctcgtaaaa aactgcttca
     3541 tttcgaagca gtttttattt tataaaggat gggacacaaa gaacactaag aagcacgacg
     3601 aacacaacgt tggagcgttg atggttttgg ctgggtttcg caattgaaca tctgccacaa
     3661 tcagcgctga tagtttgatt tccggagcaa acctaaatct ctactttatt ttcaatgcca
     3721 gttcatttag cgagatatta cttcggtaag acgtcatgat gttaccgttc ttatcataca
     3781 aagcggcaaa cggcatgtct aatagcttgt aataattttt gagaaaaaaa cttgaccctt
     3841 ctgtcccaac gtaaatattt gaatacttgt ttacgccgaa atcggcgacg aattttgtta
     3901 catccgcaat ggggcgatag gtcaccatta caaccgacgc ctttttaaaa tcagcggcgc
     3961 ttttaaaaaa atctttcatg aaagcctggc aatgatcaca atcaggagaa aaatatatga
     4021 tcaggatagg tttttcaaac gggagttgct ctgctttaaa aatagttcca ttggattgca
     4081 tgatgcgaaa aggcggcagc tttccctgtt gggccgacgc atcaaatgaa acaataaata
     4141 gaaaaacggc tagagctaac aggccaaagt gctttttatt tttactcatg tcatatatcc
     4201 aataaagctg taagaacatt taattgtgcc atatactttc caaagcggaa aagctgattt
     4261 ttttgatcgg aactgtcgac cgtacatgaa gttggtcgta tggcttcgat ggaaagaaga
     4321 tttcggtcat cacggtcagg ccatcatctg caaataattc gaccgaagct acatcgatga
     4381 tcaaagacat attgatattt tttccgggcg ccagccgagg tgccgtatgc cgtgctgcga
     4441 aactcttata aaaagcaacg ttccccgact ttctgcgatt gatgaaatac tggttttgtt
     4501 ttttatcaaa gcctattaca acttcttctc cgttgtcatt ggaaagggta atcgaaaaat
     4561 cattcgcatt ttcaatatcg agatcgatcc tgcctggaat acttagtttt ctgcttgtct
     4621 cttcaatatt atccatagta cttcgatcaa aggagatttc atcaagctcc cgtacaggct
     4681 tcgacgcaag aaagatcctg tcgtcaacat gttccattcg aagttcacgt ggtatcgtca
     4741 tcgcacttct ccattcaacc gtaggcacaa ctttcccgta gtcccagttg ctcatccacc
     4801 ctaaaaaaac ttttctatcg ccggtgtttg accaggtaac accagcataa tcatcgggtc
     4861 cgtaatcgat ccattttgtg gtggtgtcaa acggagtaaa tacttttcca ttgaacgagc
     4921 cgaggaagta ttgcgtgccc gaaccgccat ttggtgctcc cgggttcatg ctgcttatta
     4981 gtacccaaac cttttttcca ttatcagcaa ggctaaaaat atccggacat tcccatacac
     5041 ctccatgcgc accaatgttc tcaccgaaat cactttcttt tgtccagatt tttagattgg
     5101 gtgatgaata aaacgagaca tgatcatgaa cggccaatat catgatccat tttttttgct
     5161 cttcatacca catgactttt ggatccctga agtctttgat gcccggattt tttatcacgg
     5221 ggtcgccttc atatttggtc cacgtgtttc cattatctaa gctataagct atgctctgtg
     5281 tttgaaaatc attcctgccg ccacgctcac ctgcaatgtt gtggcttgtg tagatcgcga
     5341 caagcggtgc tttgccatct tttccaaaac ccgaagtatt atgtatatca acaactgcac
     5401 tgcccgaaaa aatatatccc aggctgtcgg gatataaagc aatcggttgc tccttccagt
     5461 ggatcatatc gctgctcatg gcgtgtcccc aatgcatcgg tccccacaca gtactatccg
     5521 gataatactg gaagaataaa tgataaacgc catcattata aaccattcca tttgggtcat
     5581 tcatccaatg cgcacgcgga gaaaaatgta tttgcggacg gtactgttcg ctatattttg
     5641 tttgaccaaa cagcgcctgg tgaaacaaaa ctgagataag aatgatcgta caaaaccgca
     5701 tcgattattt ttttctgaaa aagattctaa cgggaacgcc tatgaagtta aatgacgaac
     5761 gcagttgatt ttcgagataa ttcttataag gtgttttaat atcgtcggga taatttgtaa
     5821 agaatgcaaa tgaaggaacg acggttggca attgcgtaat gtatttgatc ttcaccgtgt
     5881 gtccccgaac aactggtgca tgataggctt caactgcttt gagcattacc tcattcaacc
     5941 ggcttgttgg tacatgttgc ttgcggttct cgtaaacctg cagcgccgtt tccatcgcct
     6001 tgaagatgcg ggtcttctct ttcgcagaaa tgaaaagaac gggcacatca gtgaacggcg
     6061 cgatcttttc tttcaactgc ctctcatagt ctttcgcggt gttcgtcgat ttttcgacga
     6121 ggtcccattt attcacaagc agcacaatcc cttttccttt ccgggccgcc aatgaaaaga
     6181 tatttacatc ctgggcgcta atacctttct gcgcgtcgag tattaataag cagacatcgg
     6241 cttcatccat tgcctttatc gcacgaatca ccgagtaaaa ctcaagatca tctttttctt
     6301 tatttttttt gcgtaacccc gcagtgtcga tcagcacgaa atctttttga aacaggttgt
     6361 agtgtgtgtg gatcgtatcg cgcgttgtgc ctgctatctc actaacgatg gtcctctccg
     6421 cccccaccaa tgcattcagc aaagatgact tgccaacgtt cggctggccg atgatggcaa
     6481 aacgtggcag ttgattttct tcccctgttt cttcggcgtt ttcagtcgag ataagtttcg
     6541 cgacctcgtc aagcaattca ccggagccac taccggtcat gctgcttacg aaaaatatgt
     6601 tatcgaatcc aagtgaataa aattcggtcg catcaagttg acgctcgtga ttgtcaacct
     6661 tattcactac caggaacact ggctttgtag cacgtcgtaa taattccgcc atgctttcat
     6721 ccagggacgt aatgcctgtg gaaacatcag tcatgaaaat aatagcattc gcttcttcaa
     6781 tcgctatgct cacttgcttg cgaatttcag tctcaaaaat atcctcacta tcaggcacaa
     6841 agccaccggt gtctattaca ttaaatgttt ttccattcca atcggcgacg ccgtattgcc
     6901 tgtctcttgt aacaccgctg atattgtcaa caatagcttt tcgttgttca agcaagcggt
     6961 taaataaagt gcttttgccc acgtttggcc tacctacaat tgctatggtg aatgacattt
     7021 tcgaaggggt tattggtttt ttgagttgta ataattcaaa aatttcacaa cgtcctcttc
     7081 cttccgaaag tcgattttgt tttgtgcgat ccagtcagaa caggaagtgg aagctggtat
     7141 gtccggcaac acattttctt tggtgagcct tttgattggc tcaatttttt gattgcctga
     7201 aatgaaatag cggttttgag ttacgaagta atatctcttt accgtgccaa ataacgaatc
     7261 tgcagaagca actgttcgct tgtaatattt aagcagttga tattttcctg tgtttagtac
     7321 ttgcaggtat ccgctggtca attctttggt ttgaataagg tccgggtaaa ttgtcacatt
     7381 tacaaaaaca gcatctgtga cggtggtgtc gccacccttg taaaaaatga tcaggttaat
     7441 tggatcattg gcgacaagtt cctggttatt tttatcgagg aagtagactt cgcctgacac
     7501 caggttcagg cgtgatctgc agaaccactt cgatctggcg ttagtaccat ataaattcgc
     7561 cagctcataa tcatctttcc agaaggcgct tccttttacc ttttcgtaag gaattgaaac
     7621 tatcaaattg ccggatccgt acatgtttat caccgggtct gcagatttag gtgtgggagt
     7681 ttgctcgatg aacacctggc cacgtaaata cacagttaca caaaacaata tcactgtaaa
     7741 ggctgttctt aaccatgtat tgttttgcat gtgctgttta ttccaaaaat atttactaat
     7801 agccatattc ttttaagtgg atatcgctgt ctctccattt gggccgcact tttataaaca
     7861 attcgaggaa gatttttcgt tccaggaagc tttcaatatc cgtccgggca atcgagccaa
     7921 gccgtttgat catgctcccg tcctttccta acagtatcgc cttttgactt tcccgctgaa
     7981 caattatgtc tgcctgtatc tttgtgagcg tggtcttttc cctgaactca tttacgacaa
     8041 cggcagtttg atacggtatt tcatctccaa acaactcgta gatcttttcc cgaatgagct
     8101 cactcacgaa aaatttggat ggcagatcgc tgaggtcgtc ttcattgtaa aaaggctcac
     8161 cttccggcaa caagtcaata attgacgaca ataattcgtc aagattcaac ttgtttaagg
     8221 cagacacagc caccactttt ttgcacggta aagactgctg atagtgacct gcaatggctt
     8281 ctactttttt attcgatagc ttgtctatct tgtttaagac caatatgcat ggcactttta
     8341 ttcgtatttt tttgaatgca gcaatatttt cgtccgcatc cgccgtcgag tcggccaaca
     8401 atagcgccac atcagcgtcc tcgactgcat ttttcacgtt ccgcatcatc cgctcatgga
     8461 gcttgtactt cgggtcaagg attcctggcg tgtccgaaaa aacgatctgg tagtcgcccg
     8521 gttctgttaa aaatgccttt atccggtggc gtgtggtttg aactttggac gacacaatag
     8581 cgagtttctc gcccaccagc gcgttgagca acgtgctttt ccccgcattt ggttttccga
     8641 atatgtttac aaaacctgat ttcatttctc gcggagacgt ctttctccaa tccgcgcaaa
     8701 gtacataaag aaaatttaag ggatgctata cgcttgcagt tacggtgttt ggtggtttcc
     8761 caccaagctc tccggggcca aaggggacgc cgtttcaaaa gaaccacgcg ccgatctgct
     8821 cgatgacaca gacttcttct caaacaaaca aataaatgga agtaacgtgc gcttgtgaat
     8881 aaaaatgaga aaacctttgt gccctctgcg ctctttgtgg gaaaactcgt gatacatcta
     8941 gagccctcag cgttttagtg tcccaccaag ctcgccaagg ccacaaagaa aatgggcttt
     9001 ttgcaaaaac catccccgcg atctgctgga tgccgctgca tgtcatcaaa actaaagagc
     9061 cagaataagt gtaagtgaga ttcttaataa gatgagaaaa ttctttgcgg cctccacggt
     9121 ctccgtgcga aactagtaat aaatcccga
//
LOCUS       DASQJI010000089         2108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_774381,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000089 DASQJI010000000
VERSION     DASQJI010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_774381"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..645
                     /locus_tag="VEV83_02800"
     CDS             169..645
                     /locus_tag="VEV83_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HYK44067.1"
                     /translation="MFLKDYISDVFKATKSLLIGMRRTGYYFTHRKEIITQQYPDNRD
                     ELNLPERFRGEVVMPHDEHNEHACTGCTACELACPNGTIKIVTKFDVTPEGKKKKALD
                     TFIYHLELCTMCNLCIEACPTDAIKMAQSFEHSVFDRNKLTKTLNNPGSKIRAGVE"
     gene            745..1323
                     /locus_tag="VEV83_02805"
     CDS             745..1323
                     /locus_tag="VEV83_02805"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HYK44068.1"
                     /translation="MTATQVAFYCISAFILGTGLLAVTTRKIFRSAIWLLFSLIGIAA
                     LFFWMQLEFIAAVQIIVYVGGIVVLIIFSIFLTQKAGNEMARPLRSRVFFAVVAVIAG
                     FILSYGLIYQYHFQPASTQPLNAGVADIGRQMLSTSNGGYALQFEVVSVLLLAAMIGC
                     IVIAMKSKPAARVNAKPSLELKEKTEIITVEE"
     gene            1378..1692
                     /gene="nuoK"
                     /locus_tag="VEV83_02810"
     CDS             1378..1692
                     /gene="nuoK"
                     /locus_tag="VEV83_02810"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HYK44069.1"
                     /translation="MSQVPLSQVLFVSIALFFIGMYGLFTRRNMITMLMSIELILNSV
                     NINFVAFNKYLYPDRLSGIFFTIFIITIAAAEAAVAIAIIINLYRSHHSIDVEDATEM
                     KW"
     gene            1755..>2108
                     /locus_tag="VEV83_02815"
     CDS             1755..>2108
                     /locus_tag="VEV83_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HYK44070.1"
                     /translation="MRYESYIALIPLLPLASFALLGLFGRKYFKTFSGAIGTIVLLAV
                     TILSFITAYQYFFVDGSVNGVYQPIIPLQYQWLQFSPDVSIDMGIVLDPISVMMLVVV
                     SFVSLMVHIFSLGYMK"
BASE COUNT          592 a          404 c          501 g          611 t
ORIGIN      
        1 taaagcagga agctccgatg gagctgcata aattcgtgcc gatgtttcgt tctataaacc
       61 gaacgctccg atggagcgga atccggagag caatgaacag aacgtacaag agtgcgacgc
      121 aacggaggct taatcgtagc aatggtgctt agttcaaaaa agaaaaaagt gttcttaaaa
      181 gattacatat cggatgtttt taaggcaacg aaatcgttgt tgataggcat gcgcaggacc
      241 ggctattatt ttacacaccg taaagagatc atcacgcagc aatatcccga caatcgcgat
      301 gaactcaact tgcctgaacg gtttcgcgga gaagtggtga tgccgcatga cgaacataac
      361 gagcatgcct gcacaggttg cacggcatgt gagcttgcct gtccgaacgg aactatcaag
      421 atcgttacga agtttgacgt aacgccggag ggtaaaaaga aaaaagcgct cgacactttt
      481 atttaccatc tcgagttatg cacgatgtgc aatctgtgca ttgaggcttg tccgactgac
      541 gcgatcaaaa tggcgcagtc attcgaacat agtgtgtttg atagaaataa attgacgaag
      601 accttgaata atccggggtc gaagatcagg gcgggagtgg aataatgagt aatgagtgat
      661 gagtaatgag taatgagatg cgtaatcaca actggtaact caccaatcac aaaaaagaat
      721 ttagattttt taaaaccata gcaattgaca gcaactcagg tagcatttta ttgcatctct
      781 gcttttattt tggggacagg attgctcgcc gtcacaacaa gaaaaatatt tcggtcggcg
      841 atctggctgc tgttttcact gatcggaatt gccgcgttgt ttttctggat gcagctggaa
      901 tttattgctg cagtacagat aatcgtttat gtaggcggca ttgtggtgct gattatcttt
      961 tcaattttcc ttacacaaaa agcaggtaat gaaatggcga ggccgttgcg gagccgtgtt
     1021 ttctttgcgg tggttgccgt catcgccgga tttattttaa gttatggcct catctaccag
     1081 tatcatttcc aaccggcgag tacacagcca ttaaatgcag gcgttgctga tattgggcgc
     1141 caaatgctca gcacttccaa tggcggatat gccttgcagt ttgaagtcgt gagcgtgttg
     1201 ttgctggcgg ccatgatcgg ttgcattgtg atcgccatga aatcaaaacc tgctgcgcgt
     1261 gttaacgcga aaccgagcct ggagttgaaa gagaaaacgg agatcataac tgttgaagaa
     1321 tgaagatgat ttcttttcaa aacattatta gtattgattg aaaatacttt ttaagaaatg
     1381 agtcaagtcc cgttaagcca ggtacttttt gtaagcattg cgcttttctt cattggcatg
     1441 tatggtttgt tcacaagaag gaacatgatc accatgctga tgtcgataga acttattttg
     1501 aacagcgtta atatcaattt tgttgcgttc aataaatact tgtacccgga tagattaagt
     1561 gggatattct ttacaatttt tattatcacc atcgctgcag cggaagcagc cgtagcgatt
     1621 gcgatcatca ttaatttgta caggagccat cattcaattg atgtagaaga tgcgacagag
     1681 atgaaatggt gaatgtgaat tgtgaatggt gaatagtcaa cggttgatcg tgaatcgatc
     1741 ataacagtag gaacatgagg tatgaatctt atatagcctt gattccgtta ttgccactgg
     1801 caagttttgc gctgctcgga ttatttggcc gaaaatattt taaaacattt tccggcgcaa
     1861 ttggaacaat tgttctcctt gcggttacca tactttcttt tatcacagct taccaatatt
     1921 tctttgtgga tggaagcgtg aacggtgttt atcaacccat catccccctg caatatcaat
     1981 ggttacaatt ttcgcccgat gtttccattg acatgggcat agtcctggac ccgatctcgg
     2041 taatgatgct tgtggttgta agcttcgtct cgctgatggt gcacatcttc agcctcggtt
     2101 atatgaaa
//
LOCUS       DASQJI010000090         4593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_621044,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000090 DASQJI010000000
VERSION     DASQJI010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4593
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621044"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VEV83_02820"
     CDS             <1..582
                     /locus_tag="VEV83_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44071.1"
                     /translation="SFIANYKLWQTSKQNKNDRSLSHQEFWLGAGLKLPTGSYHVDLT
                     DPQAEIGDVNSQMGTGSLDFISTLTYNITFGKVGVNTSANYKINTANNSDFRFGNRLT
                     ASSVAFYQTRAGKTALTPNLGMLYENAATNRLQKEGIPETGGYVALAVTGIELRRGNV
                     SFGASLQLPFAQDFASGQTKAETRGLLYANFSF"
     gene            complement(606..2852)
                     /locus_tag="VEV83_02825"
     CDS             complement(606..2852)
                     /locus_tag="VEV83_02825"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYK44072.1"
                     /translation="MKPVIAGVLLTLFVLFNTAVAQPTSSLSNEQIHRIGDYGKLWSV
                     LKLFNPEMAYNKINEDSLFTNNIGDLLNDPSAANFKSAVRGMLTMLGDPYTSIIEKNS
                     TDSMPLPDRPFLKWVDDSIAVLYFDMNSMMKNVIDQGSLSGFMDSLHAARGIIIDLRK
                     PVPNKTEDDRYYESEFMNTLIGVLADGPVIYPSMRTRIHYGHESETFNSSFYYQGWLS
                     ANGAAINGGKGLHKPVCFIVNRFNNTITDALAALQSKHIATIIADDSLGNFEPASFYQ
                     MQLADSLDVNVRLSEVIYPNGNKSFSPDRQLYRKQGETEESLVHAAIMSLHSENQTKA
                     TGADQLQNSFVSAKTAGYDSLAYPPASLRLLGLMRYWSTINYFCPNKDLIQKNWDSVL
                     YEYVPKLFYAKDSLEYLHTVARLITEIHDGHGFFGSERLEHLREKMPALQLRYIEDKT
                     VVYRVLDDSLKSKISAGDEIIAVNDVPVKTLRDSIAQFISASNNAALQRDVTRWVLAG
                     KENTSVKISFQHQGNRTELVLKRDKNWREMRGAPNESPVWKKLDNKTGYVDFGRLEVP
                     QIDSMFKDLQNTDAIILDDRSYPRGTVWTLISYLTDKTVTSANGTTMVASTPDPALTT
                     VQYELWQIPVSPQSIRYKGKIIVLVNETTQSQAEYSCMVLQAAYKNVTIIGSQTAGAD
                     GDVTGILLPGGINTAFSGHGVHYPDGRPTQGIGIVPDIKVSPTVNGIKEGRDEVLERA
                     IEYAKNGK"
     gene            3134..4240
                     /locus_tag="VEV83_02830"
     CDS             3134..4240
                     /locus_tag="VEV83_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44073.1"
                     /translation="MQAKYNQFQAMLAITKGSLHAILRSPSAVVFGVGFPMVFILVFG
                     FIGENSGISLDIALNKNADTSNGVYRALTHISSLHFVTEDDSIIKEDLEKGNLTAIVD
                     IKKNDAGNPAYTVELTSSEAVNPRNMQILQSILKDVINTINSVMFPSAQTVASIDNHI
                     QEIPGRKYRRIDFILPGQLGFSLLSAGVFGVAFTFFNLRQQLVLKRFFATPIRRTYIV
                     LGEATSRVLFQMLTAIIIIGIGAVAFNFTLVRGFATFMEIMLLSFIALIVFMGFGFIV
                     SSVSKNESTIPPFANMFTLPQFLLAGTFFPITVFPKWLQIFCNILPLTHFNNAMRNIS
                     FEGASFISCWKDVGVLVLWGILIYAVAIKVFRWE"
     gene            4449..4589
                     /locus_tag="VEV83_02835"
     CDS             4449..4589
                     /locus_tag="VEV83_02835"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK44074.1"
                     /translation="MQYGGTVYILTNVHHEVLYIGVTSDLFTRITEHIMKVYPNFIYR
                     KI"
BASE COUNT         1238 a          993 c          995 g         1367 t
ORIGIN      
        1 tcattcattg caaactacaa gctctggcaa acaagcaaac aaaacaaaaa tgaccggtca
       61 ttatcgcacc aggagttttg gttgggtgca ggattgaaac ttccaacggg tagctaccac
      121 gttgatctaa ctgatcctca agcggagatc ggcgacgtaa acagccaaat gggtacaggt
      181 agtctcgact ttatcagtac gcttacttac aatataactt ttggcaaggt cggggtcaac
      241 acgtctgcaa attacaagat caatacagcc aataacagcg actttagatt tggcaatcgt
      301 cttactgcaa gcagcgttgc tttttatcaa acccgtgcag gcaaaacggc gctaacacca
      361 aaccttggaa tgctgtatga aaatgctgca acgaatcggc tgcaaaagga aggtatacca
      421 gaaacgggag gttatgtagc tcttgcggta acaggcattg aattgcgtcg cggcaatgta
      481 tcgtttggcg caagtttaca attgccattt gcacaggatt ttgccagcgg ccaaacaaag
      541 gcagaaacgc gcgggctatt gtatgcaaac tttagttttt aaaatcgccg gtttatcaca
      601 cccgattatt ttccattttt tgcatactcg atagctcgct cgagcacttc gtctcgtcct
      661 tctttgatcc catttaccgt cggggaaact tttatgtcag gaacaattcc tattccttga
      721 gtaggcctgc catcgggata atgtacgccg tgacctgaaa atgctgtatt aattccaccc
      781 ggtaacagga tgcctgttac atctccgtcc gctccggcag tctgacttcc aatgatggtt
      841 acatttttat atgcagcctg taaaaccatg caactgtatt ctgcctggct ttgcgtagtt
      901 tcatttacga gtacgattat ctttcccttg tatcgaatgc tttgaggcga aacaggtatt
      961 tgccatagtt catattgcac ggttgtcaaa gcggggtccg gtgtggaagc gaccatcgta
     1021 gtgccgttgg cagaagtaac cgtcttatct gtcaagtagc ttataagagt ccagacagtt
     1081 ccccgagggt agctacgatc atcaagaatg atggcatcag tgttttgaag atctttgaac
     1141 atgctgtcga tctgcggtac ctcgagtctt ccaaaatcaa catatcctgt cttgttatcg
     1201 agttttttcc atacaggact ttcattgggc gcacctcgca tttcccgcca attcttgtct
     1261 ctttttaata caagttctgt ccggttgccc tggtgttgga agcttatttt taccgacgtg
     1321 ttttcctttc cagccaaaac ccaccgcgtc acatctctct gcaatgcagc attgttggaa
     1381 gcactgataa attgtgcgat gctatcccgc aacgttttca cgggaacgtc attgacagcg
     1441 atgatctcat cacccgcaga gatctttgat ttcaaagaat cgtcgagaac tctataaaca
     1501 acagttttat cttcaatata tcgcaattgc agcgctggca ttttctcgcg caaatgttcc
     1561 aatctttcgc ttccaaaaaa tccatggcca tcatgaatct cggtaattaa acgtgcaaca
     1621 gtgtgcaggt attcgagcga atcttttgcg taaaataatt ttggaacata ctcatataaa
     1681 acgctgtccc agtttttttg aatgagatct ttgttgggac agaaatagtt gatagtactc
     1741 cagtagcgca tgagccccag caatcgcaga gaagctggcg gatacgcgag gctatcataa
     1801 cccgcagttt tcgcacttac aaatgaattt tgtaattgat ccgcacctgt ggccttggtt
     1861 tgattttcgg agtgcagtga cataattgcg gcatgcacaa gcgactcctc cgtttcaccc
     1921 tgcttccgat aaagctgacg gtcgggcgaa aatgatttat taccatttgg ataaatcact
     1981 tcgctcaggc gaacattcac atcgagactg tcggccagtt gcatctggta aaaagatgcc
     2041 ggttcaaaat tgccaaggct atcgtctgcg atgattgtag caatgtgctt gctttgtaga
     2101 gcggcaagcg catctgtaat cgtattatta aaccggttta cgataaagca aacgggttta
     2161 tgcaagcctt tgccaccgtt aatggcagcg ccatttgcag ataaccagcc ctggtaataa
     2221 aacgagctgt taaacgtttc cgactcgtgg ccataatgta tacgtgtacg catcgatgga
     2281 tagatcactg gtccgtcagc caacacgcca atcaatgtgt tcatgaattc agattcataa
     2341 tatcggtcgt cctcggtttt gttcggcacc ggtttcctca gatctataat gatgccgcga
     2401 gccgcatgta aactgtccat aaaaccgctt aatgaaccct gatcaataac atttttcatc
     2461 atggaattca tgtcgaaata aagaaccgca atactgtcgt caacccattt taaaaatggc
     2521 cggtcgggga gtggcatgga gtcggtgctg tttttttcta ttatcgacgt atatggatca
     2581 cccagcatgg tgagcatgcc acgaacagca ctcttgaaat tggcagccga aggatcgtta
     2641 agcaggtcgc cgatattgtt tgtaaataaa ctgtcttcgt ttattttgtt atacgccatt
     2701 tcggggttaa acaatttcaa gacagaccat agtttaccgt aatcgccaat gcgatgaatt
     2761 tgttcatttg aaagcgaaga tgtcggctgc gcgacggccg tattaaagag aacgaagagt
     2821 gtgagtaaaa cccccgcgat gactggcttc atttttcatt cagttttgat cgaaggatcg
     2881 gcgtgatagt tttcggttca aaagcaaccg ccattgatag cacaatttat tcgaaaaaaa
     2941 tgagaacagt tattgaacgc agttagcatc ttttatttta gagattttct gaagagacgg
     3001 ttgtttgatc aatattcgat gctggtcata aaatgaattg agatttcggc tgcctttgtt
     3061 ggactgttca atttaaaaaa aataaatcct ttatatactg attgttgaaa tagttttgct
     3121 gccaatttta attatgcagg cgaaatataa ccagtttcaa gccatgctcg ccattacaaa
     3181 aggcagtttg cacgcgatac ttcgcagtcc gtctgcagtg gtgtttgggg ttggctttcc
     3241 aatggttttt attttggtat ttggattcat cggagaaaac agcggcattt cccttgacat
     3301 agccttaaac aaaaacgcag atacgagcaa cggcgtttat cgagcattga cgcacatatc
     3361 aagcttacat tttgttacag aagatgacag tataataaaa gaagacctcg aaaaaggaaa
     3421 tcttactgca attgtcgata ttaaaaagaa tgatgccggc aatccggcat atacagttga
     3481 gcttacgagt tcggaggccg tgaacccgcg caacatgcag attcttcaat caattctgaa
     3541 ggatgttatc aacaccatta actcagtcat gtttcccagt gctcaaacgg tcgcaagcat
     3601 tgataatcac atacaggaaa ttcccggtcg aaaataccgg cggatcgatt tcattcttcc
     3661 cggtcagctt gggttttctt tgttgagcgc aggtgttttc ggcgttgcat ttactttctt
     3721 caatcttcgg caacaactcg tgcttaaacg ttttttcgct acaccgatac gccgcactta
     3781 tatcgtactc ggagaagcca ccagccgcgt gttgttccaa atgttaactg caattatcat
     3841 tatcggtatc ggcgctgttg catttaattt tacactggtt cgtggcttcg cgactttcat
     3901 ggagatcatg ctgctaagct ttattgcact gatcgttttc atgggcttcg ggtttattgt
     3961 gagcagcgtt tcaaaaaacg aaagcaccat tcctccattc gcgaatatgt tcacactccc
     4021 acagtttttg ttagcgggca cattttttcc gattacggta tttccgaaat ggttgcagat
     4081 attctgcaac attttaccgc ttacacattt taataatgca atgcgtaata tttcgtttga
     4141 gggcgccagt ttcatcagtt gttggaaaga tgtaggcgtg ttggtgttgt ggggcattct
     4201 gatctatgcg gttgcgataa aagtattccg gtgggagtaa tagctaatca cgcaatgaaa
     4261 tttgtgaaca ggttctttct taattacttc tttgaatgcc ttcgagcaac gcatgcgcgt
     4321 gtaaaacgcg ttgtcctatt aacgttgagt cgcaatgatt gccaatcttg caataaaata
     4381 atgttcaggt ttcatgaacg agactgcacg tctttcccgc gaaggcggga atctgctaac
     4441 tttagttcat gcaatatgga gggacagtct acatcttaac aaatgtgcat catgaagttt
     4501 tgtacatcgg tgtaacttct gaccttttta caagaattac agagcatatt atgaaggttt
     4561 atccaaattt catttaccgc aaaatataat tgg
//
LOCUS       DASQJI010000091         6123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_928532,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000091 DASQJI010000000
VERSION     DASQJI010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928532"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VEV83_02840"
     CDS             <1..462
                     /locus_tag="VEV83_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44075.1"
                     /translation="QFGKERTKPGFFAGILGFVIKISPKIGPLKAMKFKPPTPDAEKL
                     FTESFDTVVVHYSGSLHQLDADDFFFTNIDFDTGSKTALGEYPLTDKTYEELVIRLKE
                     KNFSHLNTPLKENILTFYSSNDASTSPTGTDGQDKQKFDEALASLKNAQTQ"
     gene            complement(1250..1843)
                     /gene="coaE"
                     /locus_tag="VEV83_02845"
     CDS             complement(1250..1843)
                     /gene="coaE"
                     /locus_tag="VEV83_02845"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217297.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HYK44076.1"
                     /translation="MLKIGLTGGMGSGKTIVSRIFSVLGVPVFYADDAAKTVMNEDPE
                     LKQKIMSLFGAEAYLEDQLNRKYISSIVFNDPFKLEQLNVLVHPVTIAAADKWMQEQT
                     SPYVIKEAALMFEAGAAAHLDYVIGVFAPQAMRIQRAMQRDGITREQALARINNQVDD
                     NIKMKLCDFVIVNDEQQPVLPQVLKLHEKFLAIANGK"
     gene            complement(2149..2502)
                     /gene="yajC"
                     /locus_tag="VEV83_02850"
     CDS             complement(2149..2502)
                     /gene="yajC"
                     /locus_tag="VEV83_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HYK44077.1"
                     /translation="MTQMIPVLLMASPDGSQPNSSFTLVMMGAIILVFWLFMIRPQAK
                     KAKDQKKFIENLQKGDKIVTIAGIHGTINKVNDDNTIQLETNPGSYMKLEKSAISLEW
                     TQQLHKAISGEADKK"
     gene            complement(2522..2986)
                     /locus_tag="VEV83_02855"
     CDS             complement(2522..2986)
                     /locus_tag="VEV83_02855"
                     /inference="COORDINATES: protein motif:HMM:NF019242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HYK44078.1"
                     /translation="MPKFFILLLLAGGIFFSACNNAEEKPVDVTSIMKDSTKFTTMEW
                     LDTSLDFGTAKKGEKVSLVFRAKNTGDKPLYLYDVRPGCGCTLVDYTKEAIAPGKEGK
                     IMAEYDTNKGSLGAIHKTVYARSNNSNHAQTTLFFSGTVVMGDSTSTAKHKS"
     gene            complement(3018..3950)
                     /gene="nusB"
                     /locus_tag="VEV83_02860"
     CDS             complement(3018..3950)
                     /gene="nusB"
                     /locus_tag="VEV83_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HYK44079.1"
                     /translation="MITRRNIRIKVMQVLYQLETNETTANPEGSKILLNRLDQTARLF
                     AYLIYFLTEVARYAERDAAVRASKHLATSEDKNISIKLAGNTLLWKILENKSYKKAIA
                     DYKFNFEQTGPLVRRVFQELTGSEIYKEYLREPGRDPKKERDIMIFIFTDLMLPDENF
                     TSHLEEYFTNWDDDADMMVALMQSFLQKPGTLNLQEMPDPEKLQFAKELLQTVAEKKD
                     HVTDLIKSRLKNWDPDRIAALDMILMQMGVCEFLYFPTIPPKVTINEYIDLAKEYSTS
                     QSGHFVNGLLDGIHKDLIRDNKIHKTDFKSNKAS"
     gene            complement(4121..5347)
                     /locus_tag="VEV83_02865"
     CDS             complement(4121..5347)
                     /locus_tag="VEV83_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HYK44080.1"
                     /translation="MRLSFNNTETAFAYKTSKELNRGRFLFGTMNYPWFAAIGVRLTP
                     FLMKTGLPVHGIIRQTIFKQFVGGETLEETSEIAKKLGEYDVQVILDYGVEAKQGEKN
                     FDETKDQIIHNIEYAATQPNIPYISIKITGIARFGLLETLNSAPRLRSGVHDHEAEDA
                     EWNRVRDRMYDICEKAAEKNVGVLIDAEESWIQDPIDRLSVEMMEVFNREQCIVFNTI
                     QLYRHDRLNFLKMYHSISRQRGFILGLKLVRGAYMEKERARAVQMGYPSPIQQDKSFT
                     DGDFNTAVEYCIDNINEIATVIATHNEYSNLHAAELLDAKGLPHNHRHIHFSQLYGMS
                     DNITFNLAKAGYSVSKYLPFGPIRDVIPYLMRRAQENSSINGQTSRELLLIKSELKRR
                     KVKTSAQKRQTQTEVV"
     gene            complement(5413..>6123)
                     /locus_tag="VEV83_02870"
     CDS             complement(5413..>6123)
                     /locus_tag="VEV83_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYK44081.1"
                     /translation="WALWGLLLFGSTMFIAYIFYIPCHFLKEPYKARWHRVISRPWMW
                     LFLQGVGCPLRVKGKEIFEGLENCIIVSNHNSLMDVPVTTPFMARANKTIARKDFAKF
                     PVFGWIYGFGSVLVDRNDDASRRKSFEDMKRILSYGLDMVIYPEGTRNRTDKPLKTFY
                     DGAFRLAVDTRKPIVPALVFNTKKVLPVTKKFFMWPHRLEMHFLPPVQSSGLTSKQLK
                     EKVFTIMWDYFEANRNRV"
BASE COUNT         1618 a         1365 c         1296 g         1844 t
ORIGIN      
        1 cagtttggaa aggaacggac gaagcccggg ttttttgcag gcatacttgg atttgtgata
       61 aaaatttctc caaagatcgg cccgctgaag gcgatgaagt tcaaaccacc aacaccggac
      121 gctgaaaaat tatttaccga aagtttcgac actgtagtcg tacattattc gggcagtttg
      181 catcaactgg atgcagatga ttttttcttc accaatattg attttgatac cggaagtaaa
      241 acggcattgg gtgaatatcc gttaaccgac aaaacctatg aggagctcgt gatcaggtta
      301 aaagaaaaga acttcagtca tttgaatacg ccgttaaaag agaatatttt gacgttttat
      361 tcttccaatg acgcatcaac ttcgccgacc ggtactgatg ggcaagacaa gcaaaaattc
      421 gatgaggcac tggcgagttt gaaaaatgcg caaacgcaat gatgtagatg tgaaaggttt
      481 tatttagtta tctttattaa cgaaagaacg ttatggattt ctttgatact gaacatagga
      541 gaataagaat tgcagtcatt gtagtcttaa tcattttcat tatatccgct tgagtttttt
      601 taacgcactt ggtctaacag gtgtatagtt accgctttag cccaatatca ttgtgatgta
      661 ttattaggcc gacgatagaa caaactggtc tgcaaaaaca tcatcgaaat tctactcatc
      721 gatttgcgac agcaactgca gtaacgcgtc gatatctctc ctggcgtcga gatgacaatg
      781 aagtatattg ctagctttcg cttacgcttt gtgcatattg ccccgcgcct tcaggccggg
      841 gacattaaag agcgtacacc tgcgctttag cccgatatta ttctgatgta ttattagcca
      901 aggatagaac aaactggtct gcaaaaacat catcgaaatt ctactcatcg atttacgaca
      961 agtaactaca atatggcgtt gagatctctc ctggcgtcga gatgacgatg aactatattg
     1021 ttattagctt tcgcgtacgc tttgtgcatc tcaatattgc cccgcgcctt gaggccgggg
     1081 acattaaaga gcgtacacct ggggctttag cccgacatta ttctgatgta ttattaggcc
     1141 gacgatagaa caaaatggtc tgcaaaaaca tcatcgaaat tctactcatc gatttgcggc
     1201 agcaactgca gtaacgcgtc gagatgacga taatgatttg caaacgcaat tacttgccat
     1261 tcgcgatcgc aagaaatttt tcatggagtt ttagcacttg cggcagcacc ggctgctgct
     1321 catcattaac gatcacaaaa tcacagagct tcattttgat gttatcatcc acctggttat
     1381 tgatgcgtgc aagcgcttgt tcgcgtgtta tcccatcccg ctgcattgcg cgttgaatgc
     1441 gcattgcctg tggggcaaat acaccgatga cataatcaag gtgagcggcc gcccctgctt
     1501 caaacattaa cgccgcttct ttgatcacat aaggagatgt ttgttcctgc atccatttgt
     1561 ctgcagcggc gattgtgacc gggtgcacta aaacgttcag ttgttcaagt ttgaaagggt
     1621 cattgaaaac gatcgatgaa atatattttc ggttcagttg atcttccagg taagcctcag
     1681 cgccgaacaa tgacatgatc ttttgtttca gttcaggatc ttcattcatc accgtttttg
     1741 cggcatcatc agcataaaaa acgggaacac ccagcacgga gaatattctc gagacaattg
     1801 tcttaccact tcccattccg ccggttaatc cgattttcag cattgctggc aatttaatat
     1861 tctcaataga aagtttgcag tttggtcgct gcttttttcc ggctacttga tgttattcat
     1921 tttttggaac acaaaggata caaggattct cacaaagaac acgaaggaag ttgcatctgt
     1981 tttgaattac ccaagcttca ataaataaat cgttcttcgt aaacttttct ttgtgctctt
     2041 cgcgcctcct tcgtgtacat tgtgctccca ttttccccgc cggcgaatcc cctaaaaata
     2101 aaaaatccga aacttattaa atttcggatc tcttgcttgt cgcatgaatt attttttgtc
     2161 agcttcaccg gaaattgctt tgtgcaactg ttgtgtccat tccaggctga tcgcagattt
     2221 ttcgagcttc atataacttc cggggttagt ttcaagctga atcgtgttat catcattcac
     2281 tttattgatc gttccatgta tacctgcaat cgtgactatt ttgtcgccct tttgcaagtt
     2341 ctctatgaac ttcttttgat cttttgcctt cttggcctgc ggacgtatca tgaagagcca
     2401 gaagacaagg atgatcgcgc ccatcatgac cagcgtaaaa cttgaatttg gttgcgaacc
     2461 atcaggagaa gccatgagaa gaacaggaat catttgtgtc attgtagatt gtttataaaa
     2521 attaagattt atgttttgcg gtagaggttg aatcacccat taccacggtg ccgctaaaaa
     2581 aaagtgttgt ctgcgcatgg ttactgttgt tggagcgtgc atacaccgtt ttgtggatgg
     2641 cgcctaaact gcctttatta gtatcatatt ctgccattat ctttccttcc tttcccggag
     2701 cgatcgcctc cttggtataa tcgaccaatg tgcagccaca accaggcctt acgtcgtaca
     2761 ggtataaagg tttatcaccc gtattcttag cgcgaaatac gaggctgact ttttcacctt
     2821 ttttcgcggt accaaaatcg agagacgtat caagccattc catggtagta aattttgttg
     2881 aatccttcat aatggatgta acatcaaccg gcttttcttc cgcgttattg caggctgaaa
     2941 aaaagatgcc gcctgcgaga agcaacagta taaaaaactt aggcataaaa aaaaatttcc
     3001 ggcaaatgta aggtttctca acttgcctta tttgatttga aatcggtttt atgaattttg
     3061 ttatctctga tcaaatcctt gtgaatacca tccaggagcc cgtttacaaa atgcccgctc
     3121 tgcgaagtgc tgtactcttt tgcgaggtca atatattcgt taatggttac tttcggcggg
     3181 atcgtgggaa aatacagaaa ctcacaaaca cccatctgca tcagtatcat atccaaggca
     3241 gcgatgcggt cgggatccca gttcttcagc cgtgacttta taaggtcggt aacgtgatcc
     3301 tttttttcgg cgactgtctg cagaagctcc tttgcaaact gtagtttttc cgggtcgggc
     3361 atctcctgga ggttaagcgt tcccggcttt tgaagaaaac tttgcatcaa cgcaaccatc
     3421 atgtcagcat catcgtccca attagtaaaa tattcttcca ggtgcgaagt aaaattttca
     3481 tccggtagca tcaggtctgt gaagataaag atcatgatat ctctttcctt tttcggatcc
     3541 cgccccggct cccgtagata ttccttataa atctcggagc ccgttaattc ctggaacacc
     3601 ctgcgaacca gcggcccggt ttgttcgaag ttgaatttat aatctgcgat agcttttttg
     3661 tacgacttat tttccagtat tttccaaagc agcgtgttcc ctgcaagttt aatactgatg
     3721 ttcttatctt ctgacgtggc aagatgtttc gaggcgcgaa ccgctgcatc cctttccgcg
     3781 taccgtgcaa cctcggttaa aaaatatatg aggtaggcga aaagacgcgc ggtctggtca
     3841 agacgattga gcaatatttt acttccttcc gggttggctg ttgtttcatt ggtttccaac
     3901 tggtacaaaa cctgcatcac tttgatcctg atatttcttc tggtgatcat ccttgtcaag
     3961 aactttttct ggggtgcgaa gatagaggat ttgagatagg actggggaat taggaattag
     4021 gaattgggaa ttaggattta ggatttacga attacgtgcg ccgattgccg ctggcaaatg
     4081 aacaatgttt gaccgaacct caaacctcaa acttcaaact tcaaacaact tcagtctgag
     4141 tttgccgttt ttgcgcagac gttttcactt ttcttctttt caattcactt ttgatcaaca
     4201 acaactcccg gctcgtttga ccattgatgc tgctgttttc ctgcgcacgc cgcataaggt
     4261 aagggatcac gtcgcgtatt ggtccaaagg gcaaatattt gctgacagag taacccgctt
     4321 tcgcaaggtt aaaagtgatg ttgtcactca tgccatataa ttgggaaaaa tgtatatgcc
     4381 tgtgattgtg cggaagtccc tttgcatcga gtaactctgc agcgtgaaga ttgctgtatt
     4441 cgttgtgcgt tgctattacg gtcgcgatct cgttgatatt gtcaatacaa tattctaccg
     4501 cggtattaaa atctccgtct gtaaaagatt tgtcctgttg tatcggtgac gggtaaccca
     4561 tttgcactgc ccttgccctt tctttttcca tataagcacc acgaaccagc ttcaggccca
     4621 gtatgaaacc cctttgcctg gaaatgctgt gatacatttt taagaaatta aggcggtcat
     4681 ggcgatacag ttggatagtg ttgaagacaa tgcattgttc gcggttgaaa acctccatca
     4741 tttctaccga aagacggtct attggatcct gtatccaact ctcctccgca tctatcaaca
     4801 caccgacatt tttttcagct gctttttcac agatatcgta catgcggtct ctcacgcggt
     4861 tccattccgc gtcttcggcc tcgtgatcgt gcacaccgct tctgagtcgt ggagcagagt
     4921 tgagtgtttc caataaacca aaacgtgcga tgccggtgat ctttatgctg atgtatggaa
     4981 tattcggctg ggtggcggca tactcgatat tgtgtatgat ctggtctttc gtttcgtcaa
     5041 aattcttttc gccttgtttt gcctctacac cgtaatccag gatgacctgc acatcgtatt
     5101 cgcctaattt ttttgcgatc tctgaagtct cttccaaagt ttcgccgccc acaaactgtt
     5161 taaaaatcgt ttggcgaata atgccatgca ccggaagtcc tgtcttcatg aggaacggag
     5221 tgagccgcac accgatcgcg gcaaaccacg ggtaattcat ggtgccaaaa agaaaacgac
     5281 cgcggtttaa ctctttgctc gtcttataag caaaagccgt ctctgtgttg ttgaacgaaa
     5341 ggcgcatact gatgtgcaaa ttctacgcga atatcggcaa ggaaaaatta aattccatat
     5401 tccatttgac agttaaacgc ggttcctgtt ggcttcgaaa taatcccaca tgatggtgaa
     5461 aactttttct ttgagttgtt tggaagtaag gccgctgctt tgtacaggag gcaaaaaatg
     5521 catttcaagg cgatgaggcc acatgaaaaa ttttttcgtt acaggcaaaa cttttttcgt
     5581 gttaaatact aacgccggaa caatcggttt tcgcgtatcg acagcgagcc ggaaagctcc
     5641 atcgtaaaaa gttttaagtg gcttgtcggt acggttacgt gtgccttcag gatagatcac
     5701 catgtcaagc ccgtaactta agatgcgttt catatcctcg aaacttttgc gacgactggc
     5761 gtcatcattc ctgtcaacca gcacacttcc aaaaccatat atccatccaa acacagggaa
     5821 ctttgcgaaa tctttgcggg cgatggtttt atttgcacgc gccataaatg gtgttgtaac
     5881 cggaacatcc atcaggctgt tgtggtttga gacgatgata caattttcga ggccttcaaa
     5941 tatttccttt ccttttaccc gtaaagggca accgactccc tgtaaaaaca gccacatcca
     6001 cggcctggag attacccggt gccatcttgc tttataaggc tcctttaaaa aatggcatgg
     6061 aatataaaat atgtaagcga tgaacattgt ggaaccaaac aacaacaaac cccacaaggc
     6121 cca
//
LOCUS       DASQJI010000092         5045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1235462,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000092 DASQJI010000000
VERSION     DASQJI010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235462"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1162
                     /locus_tag="VEV83_02875"
     CDS             <1..1162
                     /locus_tag="VEV83_02875"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HYK44082.1"
                     /translation="NYLKPGATKLLGLFLGEGLSTSNGELWLTHRRLMQPAFHTQRLE
                     GIADVINEETTELITRFEKIPADTIIDINHEMLQLTINIISRAMFNVHMKDEMNAMMH
                     ALEKLASFAASWMKSAIKIPTNWPTPGNKIFKENCAVFDKMIYAIIERRRRELATMNG
                     PVHNDLLDMLLSHFDEVTQSPMSDKLLRDEVTTIFMAGHETSAQTLSWMLYHAAKEKD
                     ISEKLRQEAIASSSGQRIGFAEISKLVYNKQVVHETLRLYPPIWAVVRTPLQDDKINS
                     LYLPAHSNVLLNIYGLHRHPDYWESPDEFFPEHFSAVNEQSRPAFVFVPFGGGPRLCL
                     GHNFAMLVMRIVISRLVRSFEFFVPENYVPVVEPNITLRARQGIQLTIKKIV"
     gene            complement(1191..2453)
                     /locus_tag="VEV83_02880"
     CDS             complement(1191..2453)
                     /locus_tag="VEV83_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44083.1"
                     /translation="MSANVNWSIAKVHLLSRKRQTMVAILGVTFGISMFILMISFMNG
                     TNEFLQDAMLSSTPDIHIYNDIKTDSRSSITEQYFRSLPNTIIFVDHPRPKNASKNLK
                     NSDGIMKDLERNEQVAAVSPVVSAHVFFYYGPVQLNGIIDGVNINEEKKVLNISAKMV
                     EGKPEGLTTIDNSILLGQGLAENLNVHTGDLVTVLTEAGNIVQLHVAGIFQFGLGAVD
                     NIKAFMNLSDVQQLLGKDRNFVTEIHVKAKDIGESKKLANVFSQKYNYKAEDWATANA
                     SILATVVTRNVMTWVVSIALLVVAGFGIYNIMNMTIANKLKDIAILKAEGFKGRDIAS
                     IFLSQCIVIGIIGAALGITLGFVLSYLVSRIPFPKSDLVSLKFFPVIFETKYYLLAVA
                     FGVFTTFIAGLMPSVRASKSDPVAILRG"
     gene            complement(2459..3334)
                     /locus_tag="VEV83_02885"
     CDS             complement(2459..3334)
                     /locus_tag="VEV83_02885"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HYK44084.1"
                     /translation="MIDIQMRTSRKLLFSTCLFTSATLFISCDDSATVHATRKNIIES
                     VYASGKIIAENEHSIFSLTNGSVETKLVQEGDTLRKGQALFEINNITSTSGLKVSKDK
                     IDLLQQFTSPGNLAERSYIRSDCDGIVYQVMKEQGEAVRMNEPVAFVGDASKRIIRLG
                     VDQQDIEKIKPGQQVLFKTDITGDSVYPAVVKKIYQMMNESNQSFRVDAVFAEPFPSG
                     FIHCPVEANIVVSKKENALVLPRTALEGKDSLLIEENGKRKKIHVNLGAANGDYVEIL
                     NGIDENTNIIVTQQK"
     gene            complement(3390..4502)
                     /locus_tag="VEV83_02890"
     CDS             complement(3390..4502)
                     /locus_tag="VEV83_02890"
                     /inference="COORDINATES: protein motif:HMM:NF023327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3419 family protein"
                     /protein_id="HYK44085.1"
                     /translation="MNDNHPQGQVQLSKLIFTHNWEDPAMDERALKIKEGDTVFTITS
                     GGCNTLGFLRFNPAAIHCVDINPAQNHLMELKKAAFKKLDHKTVCDLFGLSESNSRKS
                     LYTQLKEFLSPEAAAFWDTNMHIISGGLVMNGRYERFVKIAGKLLQLLQGSKKVKRFF
                     TLQSTDEQKKFYDERWDNKRWRWIFKTMFNKKRLAKKGLVSDYFHFDDGSNSFSESFY
                     KRASHVMTDIPVRDNYFIALYFLGHYLTNDCIPEYLKEKNFSSIRNNIDRIFPSSADS
                     KYWLERQHSNTFDAFALSNICELMDDKDTHKLFEEVIRTAKPGARIIFRNLMIPREVP
                     EDQRNFVVKDEKLSTQLQFDDRSFVYGKVAAYTVHK"
     gene            complement(4499..>5045)
                     /locus_tag="VEV83_02895"
     CDS             complement(4499..>5045)
                     /locus_tag="VEV83_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44086.1"
                     /translation="KVGQLLLCARQHGPLQRQSAQLMQKKIHHTSSTSLTDLVSNADI
                     VISVASSIINNDDLVGLRKHAIVCDAGYPKNLQSTHMQNHERLFYGGMGILTEGFTFE
                     NNAQDILYKFPLSQVSHGCLIESAVLALEKKYCPFSSGKGNITVKAMDEILAMAGKHG
                     IKTAPLFNSSLISEDRHKEVV"
BASE COUNT         1360 a         1127 c         1083 g         1475 t
ORIGIN      
        1 aaattatttg aaacccggcg caacgaaact actggggctt tttcttggtg aaggactttc
       61 aaccagtaat ggcgaactat ggttaacaca ccgccggctt atgcagccgg cttttcatac
      121 acaacgtctc gaaggcattg ccgatgtgat aaacgaggaa acaacggaac tcattaccag
      181 gttcgaaaag atccctgcgg atactatcat cgacatcaac cacgagatgc tgcagttaac
      241 gatcaacatc attagtcgtg cgatgttcaa cgtgcatatg aaggatgaga tgaatgcgat
      301 gatgcatgca ttggagaagt tggcttcatt tgcggcgtcg tggatgaagt ctgcaataaa
      361 aattccaaca aactggccaa cacccggcaa taaaattttt aaagagaatt gtgccgtctt
      421 cgacaagatg atttacgcga tcatcgaacg aagaagaaga gaattggcga cgatgaatgg
      481 accggtgcat aatgacctgc tggatatgtt gcttagtcac ttcgatgaag tgacacaatc
      541 gccaatgagc gataaattat tgcgcgatga agtaacgacg atctttatgg ccggtcatga
      601 aacgagcgct caaacgctta gttggatgtt gtaccatgcc gccaaggaaa aagatatcag
      661 cgagaagctg aggcaggaag caatagcttc ttcgagtggc cagcgaattg gttttgcgga
      721 aatttcaaaa cttgtttata acaaacaggt ggtacacgaa accctgcgcc tgtatccgcc
      781 gatctgggct gtagtgcgga cgccgctgca agacgataaa ataaattcat tgtatttgcc
      841 ggcgcactcg aatgtactgc tgaatattta tggccttcac cgccatccag attattggga
      901 atctccggac gaattcttcc cggaacattt ctccgctgta aatgaacaaa gccggccagc
      961 atttgttttc gtgccatttg gcggcgggcc aagattatgc ctcggccaca actttgccat
     1021 gcttgttatg cggatagtaa tcagtcgcct ggtaaggtca ttcgaatttt tcgtgccgga
     1081 gaattatgtt cctgttgttg aaccgaatat aactttgaga gccaggcaag gcattcaact
     1141 tacgataaag aagattgtgt aactgaatgc ggctgcgctg ctcggggatc ttaacctctc
     1201 aggattgcaa ccgggtctga tttggaagct ctcactgatg gcattaagcc ggcgatgaat
     1261 gttgtaaaca ccccaaaggc tacggccaat agatagtatt tcgtttcaaa gataactggg
     1321 aagaatttta agcttactag atcacttttg gggaacggta tacgagacac gagataggac
     1381 aatacaaagc caagagttat accaagcgct gcgccgatta tgccgatcac tatgcactga
     1441 gacagaaaga tgctggcaat atctcttcct ttaaagcctt ccgctttcag gatggctata
     1501 tccttaagtt tattcgcgat cgtcatgttc ataatgttgt aaatgccaaa accagcaact
     1561 acaagaagcg caatactaac tacccacgtc atcacattac gtgtcacaac cgtcgccagg
     1621 atcgaggcat tggccgttgc ccagtcttca gctttgtagt tatatttttg ggagaagaca
     1681 ttagcaagct tttttgattc tccaatatct tttgctttta catggatctc cgtaacaaaa
     1741 ttgcggtcct tgccaagtaa ctgctggacg tctgaaaggt tcataaatgc ttttatatta
     1801 tcaaccgcgc cgagaccaaa ctggaaaatc cctgccacat gtaactgcac aatattgccc
     1861 gcctccgtta agacagtgac caggtcgcct gtgtgcacgt tgaggttctc agccagcccc
     1921 tggcctaaca aaatgctgtt atcgatcgtc gtcaggccct caggcttgcc ttctaccatt
     1981 ttggcggaaa tgttcaagac ctttttttct tcattgatat taactccatc gatgatgcca
     2041 tttaattgaa ccggtccata ataaaaaaag acatgcgctg aaacaaccgg ggataccgcc
     2101 gctacttgtt catttcgttc aagatctttc ataatgccat cgctattttt taaattctta
     2161 ctggcattct tgggccttgg atgatcaacg aatatgatcg tgtttggaag acttctaaaa
     2221 tattgctctg tgatagaaga cctggaatca gttttaatgt cgttgtatat atggatatcg
     2281 ggagtggaag acagcatggc gtcctgcaaa aactcgttcg tgccattcat aaaactgatc
     2341 atcaatatga acatcgaaat gccaaacgta acacccagga tcgcaaccat tgtttgccgc
     2401 ttgcgtgaaa gcaggtgaac ttttgcaata ctccagttta cattcgcgct catgctgttt
     2461 acttctgctg cgttacaata atatttgtgt tctcgtcaat gccattaagg atctcgacat
     2521 aatcgccgtt tgctgcaccg aggttcacgt gaattttttt gcgcttgccg ttttcttcaa
     2581 tcagcaaact gtctttgcct tcgagcgcag ttcgtgggag cacaagcgca ttttcttttt
     2641 tgctgacgac aatattggct tcaacgggac aatgaataaa accagaaggg aatggttcag
     2701 caaataccgc gtcaacgcga aaggattgat ttgattcatt catcatctgg tagatcttct
     2761 ttactaccgc agggtaaacc gaatcgccgg tgatatccgt tttaaacaat acctgctggc
     2821 ctggtttgat cttttcaata tcctgctgat caacgccgag tcgaataata cgtttagagg
     2881 cgtctccaac aaacgccacc ggctcattca ttcgaactgc ttcgccttgt tccttcataa
     2941 cctggtacac aataccatcg cagtcgctgc gtatatagga ccgttcggcc aggttaccag
     3001 gcgaagtaaa ttgttgcagc aggtcaattt tgtctttcga aacttttaaa cccgaagtgg
     3061 aagtgatatt attgatttcg aacagggcct gtccttttcg cagggtatcg ccctcttgca
     3121 ccagtttggt ttcaactgag ccgttggtta aagaaaaaat gctgtgttca ttttcggcaa
     3181 tgatcttccc ggatgcataa acagattcga taatattttt cctggttgca tgaacagttg
     3241 cggaatcgtc acaggaaatg aacagcgttg cgcttgtaaa aaggcaagta ctaaaaagta
     3301 attttcgtga tgtgcgcatt tgaatgtcga tcatccggtg ttgattaaat ctgttgaagt
     3361 ttacaactgc gatttcaatt ttattttagt tatttgtgaa ccgtgtatgc agccacttta
     3421 ccataaacaa aagaccggtc atcaaactgc aattgcgtgc tcagtttttc gtctttcact
     3481 acaaagttgc gctgatcttc cggcacttcc ctcggtatca tcaggttcct gaatattatt
     3541 cttgcgccgg gctttgccgt acgaatcact tcctcaaaca acttatgcgt gtccttgtcg
     3601 tccatcaatt cgcaaatatt tgatagcgca aacgcatcga atgtattgga atgttgccgt
     3661 tcgagccaat acttgctgtc ggccgatgac ggaaatatcc ggtcgatatt atttcttatg
     3721 ctgctgaaat ttttttcttt caggtattca gggatgcagt cgttagtgag gtagtggccg
     3781 aggaaataca aagcgatgaa ataattatcc cggacaggta tgtctgtcat aacatgagac
     3841 gcacgtttgt aaaagctttc cgaaaatgaa ttggagccat catcgaaatg aaaataatcg
     3901 cttaccaaac ctttcttagc caaacgtttc ttattgaaca ttgttttaaa tatccaccgc
     3961 catcttttat tatcccaccg ctcatcgtaa aattttttct gttcatctgt tgattgcagc
     4021 gtaaaaaatc tttttacttt tttgctcccc tgtaacagtt gcagcagttt gccggcaatt
     4081 tttacaaacc gttcatatcg cccattcatg acgagcccgc ctgaaatgat atgcatgttc
     4141 gtgtcccaga aagctgccgc ttccggggaa agaaattctt tcaattgagt gtacaatgat
     4201 ttcctgctgt tgctctcgct caatccgaaa agatcgcaaa cggttttatg atcgagtttt
     4261 ttgaatgcag cttttttgag ctccatcaaa tgattttgcg ccgggttaat atcaacgcaa
     4321 tgaatcgctg cggggttgaa ccgcaaaaaa ccgagcgtat tgcatccgcc cgaagtgatc
     4381 gtaaaaaccg tgtcaccttc ttttatcttc agcgcccgtt catccatcgc aggatcctcc
     4441 caattgtgtg tgaaaatcag cttggaaagt tgcacctggc cttgcggatg attgtcgttc
     4501 atacaacttc tttatgccgg tcttcggaaa tcaacgaaga attaaataac ggcgctgttt
     4561 tgattccatg ctttccggcc atagcgagaa tttcatccat cgctttaaca gttatatttc
     4621 ccttgccgct tgaaaacggg caatattttt tttccaacgc gagcacagcc gattcgatta
     4681 aacacccatg gctaacttgt gacagtggga atttatataa aatatcctgc gcgttatttt
     4741 cgaatgtaaa gccttcggta agtatgccca tgcctccata aaataaccgc tcgtgatttt
     4801 gcatatgtgt gctctgcaaa ttttttggat accctgcatc gcaaacaatt gcgtgcttcc
     4861 gaaggccaac caggtcatcg ttattgataa tggaacttgc aacacttata acaatatccg
     4921 cgtttgatac aagatctgtt aaagatgtgg aagatgtatg atgaatcttt ttttgcatta
     4981 attgcgctga ctgcctttga agaggcccgt gttgtcttgc gcacaaaagg agttgcccca
     5041 ctttg
//
LOCUS       DASQJI010000093        21016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_160731,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000093 DASQJI010000000
VERSION     DASQJI010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21016
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160731"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VEV83_02900"
     CDS             complement(<1..459)
                     /locus_tag="VEV83_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HYK44087.1"
                     /translation="MSGTVKGYQNRKLFLLMVILDGKSASQKIKDELKDRVSNLRTGS
                     RAPHLAAILVGTNGASETYVASKIRSCAEVGFQSSMIRLEESVAEDFLLQKISELNND
                     QGVDGILVQLPLPKQISEEKVINAIDPAKDVDGFHPFNIGKLVQGYPTFIS"
     gene            744..4016
                     /locus_tag="VEV83_02905"
     CDS             744..4016
                     /locus_tag="VEV83_02905"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK44088.1"
                     /translation="MRKIVSLLTLLLLTTAVAWSQGKISGTIRDQNGDPVPFATVNVK
                     GTKVSVAADANATFTITAKTGDVLVVSAVGMQATEITVGNSATISVVMTRSSGTITDV
                     VVTTALGVQRQAKSLGYSTTKISNSQLNQAKVTNVANGLSGKVSGLTVNLVNNGVKPD
                     VRVTLRGVRSFLGNNQALLVVDGNILNIRFLASINPNDIEDINILKGSSASALYGSDG
                     YNGVIIVNTKKGRGAPKIQVSSTVQQEAIAYTAKFQNRFGPNGGELDPNSFPGIIYFP
                     NDPFKPYVPYENQSYGAEYNGETVPLGAPVQIIDENGEPKTIQKYYSYTAKPDAKKDF
                     FDKGLTVINDVSYSLGDDHSSFLMSFQDMSAKGTIPEDKNHRNTFRIDGYRESGKFRA
                     DYNLSYAVTHTNTTPATFSPFRWGSTGFLGAYVLPVGSTSAFNGGGSYFQGRPVYWTV
                     INTPSFIDLRDFRDWRNDPFASPDGYFNAYYGNPWWQIDQTRLDEKNNDFIGSAALTF
                     KPTDWASITYRFGMARNDYSNNYTKAGYDFAPWAEADVLGAGNIPSSIKNLPPNSGTG
                     SSSNTELTSDLLGNFHKSFGDFDFSLLLGNQVQDKNFRAMSISANALVVPDFYNVATN
                     RTGEANVGEVYSRYRKYALFGDLTVGYKQFLYLHMTGRNDWDSRLAKEIPGDSHNNSY
                     FYPEADAAFVFSQLLKDNGPGWLSYGKVRFAISQVGQVTVNPYSLVNTFDNGAGFPYG
                     ATAGYSVSNTFNNPLLKPEKNLEREIGLELGFLKDRITVSAAAYKSTSKDQTIPIGIS
                     WATGFNTAYVNSGEMENKGVELDARVTVVQTKDIKWDVSGNFSYNENKVVNIGYGLNE
                     IPIFNNTYIALGQPYGIIKGSDWVRDPEGRIVVSKTTGFPTLDATPKYFGTAYAPRSA
                     GISTQLTYKGLTLGIVAEGRFGAVINNDLGGDLDFTGVSWYSAQAGRQVFVIPNSSYQ
                     EGDKYVANTDVTVIEGNNLFWASTWNAAVSPYVNSADFWKLREVSLTYNLPANIIAKT
                     KVLKQATIGINGRNLAAKRASQNVWSDPEFSNTSGNGLGTTDIDQTPPSRFWGGTITL
                     TF"
     gene            4058..5566
                     /locus_tag="VEV83_02910"
     CDS             4058..5566
                     /locus_tag="VEV83_02910"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HYK44089.1"
                     /translation="MKRIMLAAGVVYLFAAAGCKKGYLDINQNPNNPANVAPELVLPA
                     ALNSTAARQINSFTFVSGWMGQWAVSGSYAPSTSNFTTYKETTDFGLGLWGNIYNTLE
                     DYQYVETKSAELGTAQPDKAVYYGFYQGAAKIMKSHDFQQLVDMFGDVPYFNALQGTA
                     NLQPVYDDAQAIYQDLIVQIDAGIDFMQAAISADVSLPTGSDIMFKGDFDEWIRFANS
                     LKLRILIRQSEVNEAYAKEEAGKIQGGFLDKDASVNPGYINSAGKQNPFWSANYNTGG
                     TYINDFWRANQFGLDMYENYDDPRAHLVYGPTPGNSGVWQGNYIGATDGYVGSASSIF
                     GPGVLKSVGQPAVIMLEAESDFLQAEAALRGWISGDPEDYYHDGIVASFEYYGVPDAQ
                     AAAITYYSDPSNTLAYWKSGQTQTFYLNLIIAQKWMAENTVTPLEVWDDYRRLPNLPF
                     NQSIPLTESPYFDVLAVPVRILYVTSEYATNAANVPSQDAQAHHTQKLFWMP"
     gene            5608..6510
                     /locus_tag="VEV83_02915"
     CDS             5608..6510
                     /locus_tag="VEV83_02915"
                     /inference="COORDINATES: protein motif:HMM:NF020111.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1735 domain-containing protein"
                     /protein_id="HYK44090.1"
                     /translation="MKKISLFLQLSLLSAVFFASCVKDRNVGTDFSQIQPVLELRTPV
                     SNIAGLAYFTRATIGNLPDTVQFYANLASEYTLDRDVNVTIGVDQSKIDVYNADTVNA
                     VKYELLPDSTYTIFKTEGTIKSGQRIDSFQIAFYKDKIDATKNYMLPIVILDGDGVLL
                     SANQSVIWFHAIGNPLAGPYLWDFIRWPCTDSTSCAPDIYFTGENTSFSPVDPTTIEV
                     PSYYYIQPRYVLTFKNDGGVLSDFQVSLNQDDVDLMAANGVTVTDGPNILIADPVAGV
                     FQFQYAVHTSTPADRYIKDTYYRP"
     gene            6635..6949
                     /locus_tag="VEV83_02920"
     CDS             6635..6949
                     /locus_tag="VEV83_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3467 domain-containing protein"
                     /protein_id="HYK44091.1"
                     /translation="MPDQPPQQNQLNIEISEEISEGTYANLAIITHSHAEFVIDFVNV
                     MPGTPKSKVKSRIIFTPMHAKRFMRAMQENIERYENVHGKIQDIEQVEIPMNFGGPTA
                     QA"
     gene            7093..8190
                     /locus_tag="VEV83_02925"
     CDS             7093..8190
                     /locus_tag="VEV83_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYK44092.1"
                     /translation="MIGNRFVKFDPAADGKTRFEQLLDMFMQLLTYTSGDVNEALQWM
                     NELDKKYQLTDDEYGMGDFIEDLKRNGYIKDNTETGVLQITAKSEQSIRKRSLEEIFG
                     KLKKTKQGDHTTSKPGQGDEISPDHRPFQFGDMLEQIDFTESIRNAQINHGVESFQMY
                     EDDLQIRETDFKAQTSTVLMIDISHSMILYGEDRITPAKKVAMALSELITTKYPKDTL
                     DIVVFGNDAWPVEIKDLPYLQVGPYHTNTVAGIELAMDILRRRRNPNKQIFMITDGKP
                     TCLKIGKRYYKNAFGLDRKITNRCLNLAAQCKKLKIPITTFMIASDPYLQRFVTEFTE
                     TNNGKAFFASLDKLGAFIFRDFESGKRKTVY"
     gene            8256..9827
                     /locus_tag="VEV83_02930"
     CDS             8256..9827
                     /locus_tag="VEV83_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HYK44093.1"
                     /translation="MKDDSRPAFNGHEAIKTLGELRRSGYKPVAVKDEIRKNLLKKIR
                     TKENPFTGIIGYEDSVIPDTERALLSRHNILFLGLRGQAKTRMARLITDLLDEYIPVV
                     AGSEVNDDPLKPLSKYAKDLIAEHADETPIEWVHRDERYGEKLATPDVSVADLIGDID
                     PIKAANLRLSFADERVIHYGIIPRSNRGIFVINEIPDLQARIQVALFNILEEGDIQIR
                     GFKLRMPLDILFVFTANPEDYTNRGSIVTPLKDRIQSQILTHYPRSIDTSLEITEQEA
                     DVLEEQKALVNVSDLVRRLIEQVAFEARNNEYVDKKSGVSARLPISAFENAYSSAERR
                     AIRNNEKQTQVWISDLVGIIPSITGKIELVYEGEQEGPYQVAVNLLDKSIRSQFIIYF
                     PNPETLKKRKTANKPSQLEKENDNPYKAITRWFDSGKHLDLFVDMKDAEKINALYKVE
                     GLFGFVKKYFPHANEKENALLMEFVLHGLAAYSLISKKVIEGKIEFKDLIGSMMNLGQ
                     MNYNDDDDISDDNFR"
     gene            9846..10169
                     /locus_tag="VEV83_02935"
     CDS             9846..10169
                     /locus_tag="VEV83_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44094.1"
                     /translation="MKLSAFILFISVSLFACVANENPSHDEVEAKLKTAMRDHLYSAV
                     NNDSSKVQYRVENVVFYDDTKANVYICDFTVHMKVKSAARLVDTTGNMRATISKDFKT
                     VKRSS"
     gene            complement(10162..11373)
                     /locus_tag="VEV83_02940"
     CDS             complement(10162..11373)
                     /locus_tag="VEV83_02940"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HYK44095.1"
                     /translation="MRGLFILFIAGLWLNVNAQPFVSVKGSMITLNEKPFQLKGTNLG
                     NWLVPEGYMFKFTHATSPRMINEVLNELLGPAETNRFWNNYLHSYITEADIHYLRSTG
                     MNSIRVPFNYRLFTDEEYMGEKNRNRGFQLLDPLVAWCAKEKIYVLLDMHCAPAGQTG
                     DNIDDSYGFPFLYEDTAAQALTVSIWKRIAEHYKNESFILGYDLLNEPIATYFDSGRF
                     NPKLEPLYRRIVEAIRSVDKNHLVFLGGAQWDSNFDVFGKPFDDKLVYTFHKYWTAPT
                     REVIESYINFSKKHDVPIYCGETGENTNEWIRQFRQMLDSNNIGWHFWPYKKMDNERC
                     IISFKKPPKYDSVIAYANSSRKGFEEIRKARPNNDDVRQALEEFLANCRFENCTENKE
                     YIKALGLNTVN"
     gene            11427..12029
                     /locus_tag="VEV83_02945"
     CDS             11427..12029
                     /locus_tag="VEV83_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HYK44096.1"
                     /translation="MSLLIGRNVFGDQINKGKTLSVEEAERLLDDWVKNPRLKLHMKQ
                     VAHLMFSWAVENENLDGDEAWQWQLAGLLHDADWDQWPATHCKKIIEELESRSVDPEV
                     IHAIASHGPAHFGVEPETKMDKMLYAFDELSGLIHAYSLMRPTGYSGMDVKGVKKRMK
                     EKSFAANVSRDEINDACLRAGISVDELIEFIIDKQPSVQD"
     gene            12079..13326
                     /locus_tag="VEV83_02950"
     CDS             12079..13326
                     /locus_tag="VEV83_02950"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HYK44097.1"
                     /translation="MKQFAVPNIYRSNLVSAIKNKRRIDDKLKKPASSSVRDFSPTLL
                     DFGPLKIYLARHFGFCYGVENAIEIAFTTLDENPGKRIFLLSEMIHNPHVNADLQQRG
                     IQFLQDTHGNQLISFDELNADDIVLIPAFGTTLQIEEVLKAKGIQTEKYNTTCPFVEK
                     VWNRSEQVARKGYSIVVHGKPTHEETRATFSHASAYTPTVVINDMKEAIELGKYITGE
                     KEPALFYDEFKARFSYGFDITKDLERFGVVNQTTQLATDTQAIAEYLKALVKVHYNLD
                     DENIYERFADTRDTLCYATNDNQSAVTGLLKTKADFAIVVGGYNSSNTSHLVELCEAQ
                     LPTYFINDAEKMISSGKIFHCNWKTKEEYITENFIPQKEPVSVLLTSGASCPDALVER
                     VIEKLKSFFPAARTLGELEAEFY"
     gene            complement(13405..13908)
                     /locus_tag="VEV83_02955"
     CDS             complement(13405..13908)
                     /locus_tag="VEV83_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44098.1"
                     /translation="MKKIYTLLLFLFFHSYFCLAQSPDGNDGGGRVEAVKMAYMTEQL
                     NLTPQEAQSFWPVYNSYTNEIRQARQQYANDEVAYEKKVVEIKERYQGNFRKVLGSNT
                     QRVNKVYTSERQFKDLLRNEQKNRQQNYQQKEKEVQQAPPHNNGNKNNANKINNKGGS
                     KKQHPPR"
     gene            complement(13919..14755)
                     /locus_tag="VEV83_02960"
     CDS             complement(13919..14755)
                     /locus_tag="VEV83_02960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44099.1"
                     /translation="MEDNINILTELKEAGSTILLNANRSNLYFISPDYFNNLPRDVMS
                     RIFVESIPRTNPYSVPTGYFDQLSTIILENIGVHDSIPMLDGVGEMLYSVPEGYFENF
                     ASNVLQKIKGQTSDSVQAELEELSPLLSKIPKTNVYAIPDGYFDALTPLKKQKENTPA
                     KIISFGAKTRSWINYAAAACVAAILLGGAYMYFSKPGSEQIANQPKKGIDIQKGLSEL
                     TDSEITDYLNHDNSTAVYTSQGSDEQRDLDVNMLLQNMSDEEIEQYLINNADPGEEKG
                     GI"
     gene            complement(14790..15335)
                     /locus_tag="VEV83_02965"
     CDS             complement(14790..15335)
                     /locus_tag="VEV83_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK44100.1"
                     /translation="MQIDDRELLQQFKIPETKERAFTAIIKKYQEKLYWHVRRMVIEH
                     EDANDVLQNVFIKVWNGLENFREDSQLYTWLYRIATNESLTFLDQQKKKGSVSLSDVE
                     TGLANKVVADKNFDANRLEWKLQLAIQQLPEKQKIVFNLRYYDEMPYEEMSRVLDTSE
                     GALKASYHHAVKKIEEFIKNN"
     gene            complement(15428..16483)
                     /gene="galE"
                     /locus_tag="VEV83_02970"
     CDS             complement(15428..16483)
                     /gene="galE"
                     /locus_tag="VEV83_02970"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HYK44101.1"
                     /translation="MKKILVTGGCGYIGSHTVVDLFESGFDVISIDDNSRSTTYLLDG
                     IEKITGKRLKNYKVDLKNFDETLAVFQENEDIKGIIHFAAFKAVGESVEKPLEYYENN
                     LFSLVNVLRCAKEFHIPHFVFSSSCTVYGNPDSIPVTENSPIKKAESPYGATKQMGEQ
                     IVHDFSTVHEGTSILLRYFNPVGAHPSGLIGELPLGKPENLFPAITQTAIGKLPQLIV
                     YGHDYPTRDGSCVRDYIHVSDIAHAHTLALQYLMDGRQRAKCDIFNLGSGNGVTVLEA
                     IKAFEKVSGRKLNYKLGPRRPGDVIAIYANNDLAINHLGWNISYDLEAMMRTAWAWEL
                     NIKRDEELVTRQNPVLN"
     gene            complement(16572..17711)
                     /locus_tag="VEV83_02975"
     CDS             complement(16572..17711)
                     /locus_tag="VEV83_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HYK44102.1"
                     /translation="MATLLVVIIVLAVVFDFINGFHDAANSIATIVSTKVLTPFQAVV
                     WAAFFNFLAYFIFRDHGVANTVAKTVNAGAYDLTVVLAGVIAAICWNLLTWWYGIPSS
                     SSHTLIGGFAGAAVAHSGFGSINWSLNGGISLTLIFILLAPIIGMVISVFITLVTIQR
                     KFWLKMLIIFVTVTSCLVFIKFKKPFEFWALLVLGVIFTVSYFYNHFRKQTAYRTANM
                     YKRLQLVSSASFSLGHGGSDAQKAIGIIGAAMVAENIIPDIAHIPSWVPFMCYTAMGL
                     GTMSGGWRIVKTMGTKITKVTPLEGVCAETAGAITLFTAANLGAPVSTTHTIAGAIVG
                     VGATKRMSAVRWGITVNLVWAWILTIPVSGLLAAAFYWFFSLFSA"
     gene            complement(17750..18397)
                     /locus_tag="VEV83_02980"
     CDS             complement(17750..18397)
                     /locus_tag="VEV83_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HYK44103.1"
                     /translation="MSLNSIMKIFQPKDKIFYTFFEEVVNTVAEMSSLLKKLITETEK
                     DKRFAILSQIENAEHKNDDTTHRIFTELGRTFITPFDREDIHYLATTLDDVADYIYSS
                     AKRIAFYNINIYDDGIVKLANLIGFAVDEIKIAVTGLRDMKNLQAMTNALVKINSIEN
                     QADDIYDLCVERLFEMEPDVKMLIKKREVYHAMETATDKCEDAGNAIESIIVKYA"
     gene            18440..18922
                     /locus_tag="VEV83_02985"
     CDS             18440..18922
                     /locus_tag="VEV83_02985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44104.1"
                     /translation="MTLKDLTIIYYRLYPGTFNARMKQLQIKARKVALNFCGINIQVI
                     VSAPDGGFNSVKNRWPCAQHIIFASATSLKMNYLNFLYTVTAAFFIAVLIKTTYFFKS
                     TSERTVWKWIYFNKGSLYGSRTRQKLRLKKMQNLLSIILLVLFLSDMLIVLCHMERIL
                     "
     gene            19019..20053
                     /gene="murB"
                     /locus_tag="VEV83_02990"
     CDS             19019..20053
                     /gene="murB"
                     /locus_tag="VEV83_02990"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HYK44105.1"
                     /translation="MKLEQDISLKPYNTFGIDVKARYFARFSNVEELTELLNLQGKTN
                     LKALILGGGSNLLFTKNVNGYVLKNELAGIQLIKEDQNHYYVKVSAGENWHRFVMHCV
                     AHNYGGLENLSLIPGNVGASPMQNIGAYGAELKDVFENLEALRKSDRTIRTFTANDCE
                     FGYRESVFKRKYKDEFVILNVTFRLNKKPVFNTSYGAVAQELEKMGVIEPSIRSISDA
                     VINIRKSKLPDPAQIGNAGSFFKNPTISLAQFEQLQKKVHDKLQAAEIPHYKVDDSHV
                     KIPAAWLIEQCGWKGYREGDAGVHTKQALVLVNYGNASGEALHQLATKISNSVETKFG
                     IELEREVNIV"
     gene            complement(20094..>21016)
                     /locus_tag="VEV83_02995"
     CDS             complement(20094..>21016)
                     /locus_tag="VEV83_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYK44106.1"
                     /translation="KLGYPKNAKVVILHVDDVGMSFDSNEGAINALTKGVATSCSVMM
                     PCPWVPAFVHYLKQHPDIDAGLHLTLTSEWKEYRWGPLAGKSLVPGLTDTEGAMWPEV
                     ADVVQHATADEVEKEIRAQLDRARTMGFEPTHLDSHMGTLFASAAFLQRYVKVGIENH
                     IPVMFPAGKASLIQQQQHFSDAQMEQLRMVGKTIWASGLPLLDDLYNYSYEWQIPNEI
                     KNDDKKLQAYKTQKYIEALKALKPGVTMIIMHCTAPTEVFAHISDSGPTRKADMLAMM
                     DPAFKKALQDEGIILTTWRELKERRTKISQ"
BASE COUNT         5915 a         4535 c         4675 g         5891 t
ORIGIN      
        1 agaaataaag gtagggtatc cctgcacgag cttgcctata ttaaaaggat gaaacccgtc
       61 gacgtctttg gccggatcta tagcattgat cactttttct tcgctgatct gttttggtag
      121 cggcagttgt accaaaatcc cgtcgacgcc ctgatcatta tttagttcgc tgatcttttg
      181 aagcagaaaa tcttcagcaa cggactcttc taatcttatc atggacgact gaaaaccaac
      241 ttcagcacaa cttcttattt tgctggcgac gtatgtttca ctggctccgt tggttccgac
      301 caaaatggcg gccagatgag gggccctcga gccagttcgc agatttgaga cgcgatcttt
      361 aagttcatcc ttgatctttt gggaagcgct tttcccgtct aaaataacca ttagcaaaaa
      421 tagcttcctg ttctgataac ctttaactgt gccgctcata aaaattcagg atgctaacgg
      481 caattagctt taaccttttt ttaacatttt tagctgtttt aattattccg tcttttcgga
      541 aaattttttt ccgataattc attggtattg aaaatgaaac tattgttgta aggaagcggc
      601 atttttctat tgcgctgaaa gcagcacttt ttgcagcgcc tttgtctttt ctgtttgtca
      661 tatttaacaa gccgttcgtt tttttttaac tgcttgttca taatcttata tattcgcaca
      721 cttaaattct aaaattgtct aaaatgagaa aaattgtaag tttacttacg ttgctactgc
      781 ttactaccgc tgtggcttgg tcacaaggaa aaataagtgg tacgattagg gatcagaacg
      841 gggatcctgt tccatttgcc acggtgaatg taaaaggtac aaaagtatct gtggcggctg
      901 acgcaaatgc aacttttaca attactgcga aaactggcga tgtgctggtt gtatctgctg
      961 taggcatgca ggctactgaa ataactgtag gcaattcggc cactatttca gtagttatga
     1021 cccgcagttc aggaacaatt acggatgtgg tcgtaacaac cgctctcggc gttcagcgcc
     1081 aggcaaagtc ccttggttat tctactacga agatcagcaa ttcacagcta aaccaggcca
     1141 aggttaccaa tgtggctaac ggtctttccg gaaaggtttc gggcttaacc gtaaaccttg
     1201 tgaataatgg cgtgaaaccg gacgtccgtg ttacccttcg cggcgtacgt tcatttttgg
     1261 gaaataacca ggcgcttctg gttgttgatg gaaatatcct gaacatcagg ttcctggcat
     1321 caattaatcc aaatgacata gaagacatca acatcctcaa aggatcatct gcatccgcgt
     1381 tgtatggctc agatggatat aacggagtaa ttatagtaaa tacaaagaaa ggaagaggcg
     1441 cgccgaaaat acaggtgagc agcactgttc agcaggaagc gatcgcttac actgcaaagt
     1501 ttcaaaatcg cttcggaccg aacggtggtg aattggatcc caattctttc cccggtatca
     1561 tctattttcc taacgaccct ttcaagccct atgttcctta cgaaaaccaa agctacggtg
     1621 ctgagtataa cggtgaaacg gtaccacttg gcgcccccgt acaaataatt gacgaaaatg
     1681 gagagccgaa aactatccag aaatactatt cttatactgc taagccggat gccaagaaag
     1741 atttctttga taagggattg accgttatca acgatgtttc ttactcattg ggtgatgatc
     1801 acagttcgtt ccttatgtcg tttcaggata tgagtgcaaa gggtacgatc cctgaagata
     1861 aaaaccacag gaacacattc cgtatcgatg gttataggga atcaggaaaa ttccgcgctg
     1921 attacaattt gtcatatgcg gtaactcaca cgaacacaac gccggctacc ttctcgcctt
     1981 tcaggtgggg aagtacaggt ttccttggtg cgtatgtatt gccggttggt agcacttcag
     2041 ccttcaatgg cggtggttcg tacttccagg gccgcccggt ttactggaca gtgatcaata
     2101 cgccgtcatt tattgatctg cgtgatttca gggactggag aaatgatccg tttgcaagcc
     2161 ccgatggtta tttcaacgct tactatggta acccatggtg gcagatcgat caaacgaggt
     2221 tggatgaaaa gaacaacgac ttcattggaa gcgcagcgct cacattcaaa cccacagact
     2281 gggcatctat tacatacaga tttggaatgg ccagaaacga ttacagcaat aactatacaa
     2341 aagctggtta tgattttgct ccctgggcag aggccgacgt tttaggagcc ggtaatatac
     2401 catcaagcat taaaaactta cctcctaact caggtactgg ttcaagcagc aataccgaat
     2461 taaccagcga cttgttgggg aacttccata aatccttcgg tgatttcgac ttctctttgc
     2521 tgttgggtaa ccaggtacag gataagaatt tccgcgccat gagcatttcc gctaatgcgc
     2581 ttgttgttcc ggatttctat aatgttgcaa cgaatagaac aggtgaagct aacgttggcg
     2641 aggtttattc acggtatagg aaatatgctt tattcggaga tctgaccgtt ggttacaaac
     2701 aattccttta cctgcatatg actggaagaa atgactggga tagccgttta gctaaagaga
     2761 tcccgggcga cagccataat aatagttact tctatcctga agcagatgcg gcgttcgtct
     2821 tctctcaact gctgaaggac aacggaccgg gctggttgag ttatggtaag gtaagattcg
     2881 ccatcagcca ggttggccag gtaacagtaa atccgtacag tctcgtgaat acattcgaca
     2941 acggcgccgg ttttccttat ggcgcaacgg cgggttatag cgtgtctaat acgttcaaca
     3001 atcccttgtt aaagcctgaa aagaatcttg aacgcgaaat tggtttggaa cttggattct
     3061 taaaagatcg gatcaccgtt tcagccgcag cctataaatc aacctcaaaa gaccagacaa
     3121 ttccaattgg catttcatgg gctaccggtt ttaacacggc ctacgtgaac tcgggagaaa
     3181 tggaaaataa aggggtagaa ttggatgcaa gggtaacggt tgttcaaaca aaggatatca
     3241 aatgggatgt aagcggtaac ttctcctata atgaaaacaa ggtggttaac ataggatatg
     3301 gcctcaacga aattcccatc tttaataaca catatatagc acttggtcag ccgtatggta
     3361 tcatcaaagg aagtgactgg gtgcgtgatc ccgaaggaag aattgttgtt agcaaaacga
     3421 caggattccc tactctggat gcaaccccta aatatttcgg aaccgcctat gctccacgct
     3481 cggcaggtat tagcactcaa cttacttaca aaggtttaac gctcggcatc gttgctgagg
     3541 gccgctttgg tgctgttatc aataatgacc ttgggggtga cttagacttt accggtgtat
     3601 catggtattc tgcacaggcc ggccggcagg tatttgtaat tcccaactct tcgtaccagg
     3661 aaggtgacaa atatgtggca aacacggatg tcaccgttat tgaaggaaac aacctattct
     3721 gggcgagtac ctggaatgca gcggttagcc catatgtaaa tagcgccgat ttttggaagt
     3781 taagggaagt atcattaacg tacaacttac ctgcaaacat tatcgccaaa acaaaagttt
     3841 taaaacaagc tacgattggt ataaatggaa gaaacctggc tgcaaaacgg gcaagccaga
     3901 atgtttggtc agatcccgaa tttagtaaca cgagtggtaa tggtttagga acaacagaca
     3961 tcgaccaaac gccacctagc aggttctggg gtggcacgat cactttaacg ttctaaaaac
     4021 tttttcgaaa ttacttttaa tcaaaatgag aattaaaatg aaaagaataa tgttagccgc
     4081 gggggttgtg tacctgtttg cggctgcagg atgtaaaaaa ggttatttgg acataaatca
     4141 aaatccaaat aatcctgcca atgtagctcc ggagctggta ttaccggcgg cattaaattc
     4201 gactgctgcc cgccagatca attctttcac tttcgtcagt ggctggatgg ggcaatgggc
     4261 ggtgagcgga agctatgcgc caagcaccag caatttcact acttacaaag aaacgaccga
     4321 ttttggattg ggtttatggg gcaatattta taacaccctt gaggattatc aatatgtgga
     4381 aacaaagtca gccgaattgg ggacggccca gccggataaa gctgtttatt acgggtttta
     4441 ccagggtgcg gcaaagatca tgaagtcgca tgactttcag caactggttg atatgtttgg
     4501 cgacgtgcca tatttcaatg ctcttcaggg caccgctaat cttcagccag tttacgatga
     4561 cgcacaggcg atctatcagg acctgatcgt acagatcgac gctggcattg attttatgca
     4621 ggcggccata agtgctgatg tttcccttcc aaccggaagc gacattatgt tcaaggggga
     4681 tttcgatgaa tggattcgtt tcgcgaacag tctaaagttg cgcatattga tccgccaatc
     4741 ggaggtgaat gaagcttatg cgaaagaaga agccggtaaa attcagggtg gatttcttga
     4801 taaggacgca tctgttaatc ccggctatat caactctgcc ggcaaacaaa acccgttctg
     4861 gagcgctaat tataatacgg gcggcactta cataaatgac ttttggagag ccaaccagtt
     4921 cgggcttgat atgtatgaaa actacgatga cccaagggct caccttgttt acggtccaac
     4981 acccggcaat agcggcgtgt ggcaaggaaa ctacatcggc gcaacggatg gttatgtagg
     5041 ttctgcttcg tcaattttcg gacctggtgt acttaaatct gtaggccagc ccgcggtgat
     5101 aatgctcgag gcagaaagtg attttctcca ggctgaagct gctttgagag gatggataag
     5161 tggagaccca gaggactatt atcacgatgg gatcgtagct tcctttgaat attatggcgt
     5221 tcccgacgcc caggccgcag ctataacata ttactctgat ccgtctaata cgcttgcata
     5281 ctggaagtcc ggccaaacgc agacttttta tttaaatctc ataattgcac agaagtggat
     5341 ggccgaaaat accgttactc cattggaagt atgggatgat taccgcaggt tgccgaacct
     5401 tcctttcaac cagtcaattc cgcttacgga atcaccttat ttcgatgtac tggcggttcc
     5461 tgttcggatc ctgtacgtaa caagtgaata tgcgacgaat gccgcaaatg ttcccagcca
     5521 ggatgcccag gcgcatcata ctcaaaagct attctggatg ccctgattaa ttgaacaacc
     5581 attaaaaaat tagtacaaaa aataattatg aaaaagatat cattgtttct tcaattaagc
     5641 ttgctctccg ctgtgttctt tgcgagttgc gtaaaagaca gaaacgttgg caccgacttc
     5701 tcgcagatcc aaccggtgtt agagttacgg acaccggtca gcaacatagc cgggttggct
     5761 tatttcacaa gagccacgat aggtaatctt cctgacacgg ttcagtttta tgcaaatctg
     5821 gcctccgagt atacgctaga cagagacgtc aatgttacaa taggcgtaga ccagtcaaaa
     5881 atagatgtct acaatgcaga caccgtgaat gcggtaaagt acgagttatt gcctgattct
     5941 acttatacta ttttcaagac ggaaggcacc ataaaaagcg ggcaacgtat tgactctttc
     6001 cagatagctt tttacaagga caaaattgat gcaacaaaaa actacatgct tccgatagtc
     6061 attttggatg gcgacggcgt actgttgagc gcaaatcaga gcgtgatttg gttccatgct
     6121 atcggcaatc cgttagcagg cccttactta tgggacttta tccggtggcc ttgtaccgac
     6181 agtacttcct gcgcacctga tatttatttc accggagaga atacctcatt ttctcctgtt
     6241 gatccaacca caattgaggt accaagctat tattacattc agccccgtta tgtgttaacg
     6301 tttaagaatg atggcggcgt tttgagtgat ttccaggtaa gcctcaacca ggacgatgtt
     6361 gacctcatgg ctgctaatgg cgtaacagta actgacggcc ctaatatttt aattgctgat
     6421 ccggtagctg gagtcttcca atttcaatat gcagttcata cttcaactcc ggcagacagg
     6481 tatataaagg atacatatta taggccatag gcgaattata aggtcgaaga aacacttctt
     6541 cgtaaaaaag ctattccttc gcggggatag cttttttatt taccgccttc agtgtgcttt
     6601 ttttcttcaa atttgtaacc taatttatta aatgatgcca gatcagccac cacaacagaa
     6661 ccagttaaac atagagatca gcgaagaaat atctgagggc acctatgcga accttgcgat
     6721 cataacgcat agtcatgcgg aatttgtgat cgactttgtg aacgtaatgc cgggcacgcc
     6781 aaaaagcaaa gtaaaatcac gaatcatttt tacccccatg cacgcgaagc ggtttatgcg
     6841 cgccatgcag gagaatattg aacgttatga aaacgtgcat ggaaagatcc aggatattga
     6901 acaagtagag atccctatga attttggagg gccaactgcg caggcatagt ttctgcagcc
     6961 agagtatgta ctcttgcaat ttctaaaaga actcagccat ttattttttg tgagatgctt
     7021 tttatgatat aaactttgca tcatcacaat ttgttatcat tttagtacac tgtttttatt
     7081 tagcttacac ctatgatcgg aaatcgattc gtaaaattcg atcctgcagc agatggtaaa
     7141 acgagattcg agcaattgct cgacatgttc atgcagctac tcacctatac gagcggcgat
     7201 gtgaacgagg ctctgcagtg gatgaacgag ctcgataaaa aataccagct tacagatgac
     7261 gaatatggaa tgggcgattt tatcgaagac cttaaacgca atggctacat taaggacaac
     7321 accgaaaccg gtgttctgca gataacagcg aagagtgagc agagtattcg caaacgcagc
     7381 ctcgaagaaa tattcggtaa actgaagaag acaaaacagg gtgatcatac aaccagcaaa
     7441 ccggggcagg gcgacgagat aagtccggat caccggccgt tccaatttgg tgacatgctg
     7501 gagcaaattg attttactga aagcattcgt aacgcgcaga tcaaccatgg cgtcgaaagc
     7561 ttccagatgt acgaagacga tcttcagatt cgcgaaacag atttcaaggc acagacatca
     7621 actgtgctga tgatcgatat ttcgcactcc atgatattat acggcgaaga ccggataacg
     7681 ccggcgaaaa aagtggcgat ggctctaagc gagcttatca caaccaaata tccaaaggac
     7741 acattagata ttgttgtatt tggaaatgat gcatggcccg ttgagataaa agacttgccc
     7801 tatttacaag tgggtccata ccatacgaac acagttgccg gaattgagtt agctatggat
     7861 attttacgtc gcagacgaaa tcccaacaag caaattttta tgatcaccga cggtaagccc
     7921 acctgtctaa agataggtaa gcgctactat aaaaatgcgt ttgggttgga tagaaaaatt
     7981 accaacaggt gtctgaattt ggcggctcaa tgcaagaaac taaagatacc catcactacg
     8041 tttatgatag caagcgatcc ttatttgcaa cgcttcgtga cagaatttac ggagacaaat
     8101 aacggcaagg cgtttttcgc ctcgctggac aaattaggag cgttcatctt ccgtgatttt
     8161 gaaagcggca aaagaaaaac cgtatattga aaaccggaac caggagagag aatttttagt
     8221 tgtaacagat taagtgatct atgcaaagaa tgtttatgaa agatgacagt cgtcctgcat
     8281 tcaatgggca cgaggctata aaaacgttag gcgagttacg gcgtagcggg tataaacctg
     8341 tggccgttaa agatgaaatt cgaaaaaatt tgcttaaaaa gattcgcacg aaagaaaacc
     8401 cattcacagg gatcatagga tatgaggatt cggtaattcc tgacaccgaa cgcgcgctgt
     8461 taagcaggca taatattttg ttccttggtc tgcgcgggca ggcaaaaacg cgcatggcac
     8521 gattgataac ggatctattg gatgagtaca ttcccgttgt ggccggcagc gaagtaaatg
     8581 atgacccgct caagccgtta agcaaatatg caaaggacct tattgccgaa catgcagacg
     8641 aaacgccgat agaatgggtg caccgtgacg agcgttatgg tgagaagctc gccacgcccg
     8701 atgtaagcgt cgctgatctt attggcgata ttgatccgat aaaagctgcc aaccttcgat
     8761 tgagttttgc agatgagcgg gtaattcatt acggcatcat tccgcgaagc aaccgcggca
     8821 tttttgtgat taacgaaatt cccgacttac aggcgcgtat acaagttgcc ttgttcaata
     8881 ttttggaaga aggcgatata cagatcaggg gatttaagct gcgtatgccg ctggatatat
     8941 tattcgtctt tactgcaaat ccggaagatt atacaaaccg tggaagtatt gttactccgc
     9001 tgaaagacag aattcaaagc cagatactca cgcattaccc gcgaagtatc gacacttctt
     9061 tggaaattac cgaacaggaa gcagatgtgc tcgaagaaca aaaagcattg gtgaatgtca
     9121 gcgatcttgt ccgccggctc atagaacagg ttgcttttga ggcgcggaac aatgaatacg
     9181 ttgataagaa aagcggcgtt agcgcaaggt tgcctatttc agcttttgaa aatgcttata
     9241 gcagtgcaga gcgacgggcg atccggaata atgaaaaaca aacgcaggtc tggatcagcg
     9301 accttgttgg tatcattccc tccatcaccg ggaagatcga gctggtttat gaaggggagc
     9361 aggagggacc ttaccaggtt gcagtgaacc tgcttgataa atctattcgt tcgcagttca
     9421 tcatttattt tccaaatccc gaaacattaa aaaagagaaa gaccgcgaac aaaccttctc
     9481 aactggaaaa ggaaaacgat aatccgtaca aggctatcac gcggtggttc gactcgggca
     9541 agcatctgga tctatttgtt gatatgaagg atgctgaaaa gatcaacgct ctttataaag
     9601 ttgaaggtct gtttggattt gtaaaaaagt atttcccgca cgcgaatgaa aaagaaaatg
     9661 ctttgctgat ggaatttgtg ttgcacggcc tggccgctta ttcactcatc agcaaaaaag
     9721 ttattgaggg aaagatcgag ttcaaagatc ttatcggtag catgatgaac ctcggccaga
     9781 tgaactataa cgatgacgat gacataagtg atgacaattt cagataacga tattcccgac
     9841 ttgatatgaa actttctgct tttattcttt tcataagcgt ttcgttattt gcctgtgtcg
     9901 cgaatgagaa tccgtcccac gacgaggtgg aggcaaagct taaaacagcc atgcgggacc
     9961 atctgtacag tgcagttaac aatgactcat ctaaagttca atatcgtgtg gagaatgttg
    10021 tcttctacga tgacactaaa gcaaatgttt acatctgcga ttttacggta catatgaaag
    10081 tgaaatcggc tgcgcggttg gtcgatacta ccggcaacat gcgcgctaca atttcaaagg
    10141 attttaaaac ggtgaagcga tctagttaac agtgttgagc ccgagtgctt ttatatattc
    10201 cttattctcg gtgcaatttt caaaccggca gttggccaaa aattcttcca gcgcctgccg
    10261 cacatcatca ttatttggcc ttgcttttct tatctcctca aagccttttc tcgaactatt
    10321 tgcatacgca atcaccgagt catatttcgg tggttttttg aaactgatga tgcaacgttc
    10381 attatccatc tttttataag gccaaaaatg ccagccgata ttattactgt ccagcatttg
    10441 cctgaactgt cttatccatt cattcgtgtt ctcaccggtt tcaccgcaat agatcggcac
    10501 atcatgtttc ttgctgaagt tgatataaga ttcaattacc tctctcgtcg gcgcagtcca
    10561 gtatttgtga aaagtgtaga caagtttgtc gtcaaaaggt tttccgaaaa catcgaaatt
    10621 ggaatcccat tgagcgccgc ctaaaaacac aaggtgattc ttgtcaacac tgcggatcgc
    10681 ttcaacgatt cgcctgtata atggctcgag cttaggattg aaacgtcctg aatcgaaata
    10741 cgtcgcgatg ggttcattca gtaagtcata tccgagtatg aacgattcgt tcttatagtg
    10801 ttctgcgatc cgtttccaga tcgaaacggt gagtgcctga gcggcagtgt cttcatacag
    10861 gaatggaaat ccataactgt cgtcgatgtt atcgcctgtt tgcccggcag gtgcgcaatg
    10921 catatcaagc agtacataaa ttttttcttt cgcgcaccat gcaacgagtg gatccaataa
    10981 ttgaaatccg cgatttcgat ttttttcacc catatattct tcatcggtga acagccggta
    11041 attaaaaggc acccggatcg aattcattcc tgtagatctc aaatagtgta tatcagcttc
    11101 agtaatgtag ctatgcagat aattattcca aaatcgattt gtttcagcgg ggccgagcaa
    11161 ctcgttcaac acttcattta tcattcgggg agatgttgca tgcgtgaact taaacatata
    11221 tccttcagga acgagccagt ttcccaggtt agtgcctttg agttgaaacg gtttctcgtt
    11281 caatgtgatc atacttcctt tcaccgacac aaaaggctgc gcatttacgt ttaaccaaag
    11341 accagctata aataaaatga ataatcccct catggttaaa atgatttttg agttttgaac
    11401 tagtaggttt gcaataaatc taaattatgt ctttattaat tggccggaat gttttcggtg
    11461 accagataaa taaaggtaaa acgttatccg tcgaagaagc tgagcgtttg ctggacgact
    11521 gggtaaaaaa tccacggctt aagttgcaca tgaagcaggt cgcacacctg atgttcagtt
    11581 gggcggtgga aaatgaaaac ctggacggcg atgaggcctg gcaatggcaa cttgcaggct
    11641 tgttacacga tgccgactgg gaccaatggc cggcaacgca ttgtaaaaag atcattgaag
    11701 aattggaaag caggagtgtg gatccggagg tcatacatgc aatagcttcc catggccccg
    11761 ctcatttcgg tgtcgagcca gaaacaaaga tggataaaat gctgtacgcc tttgacgaat
    11821 taagcggcct cattcatgcc tattcactta tgcgtcccac gggttattcg ggtatggatg
    11881 tgaagggcgt gaaaaaaaga atgaaagaaa aaagcttcgc tgcgaatgtt tcaagagatg
    11941 agatcaatga cgcttgcctc agagccggta tctctgtgga cgaactgatc gaattcataa
    12001 ttgacaaaca accttcggtg caagactgag ttaattcctg atcgcaaagt tgcatgtttg
    12061 ttatcttcgt ggcgctttat gaagcaattt gctgttccaa atatttatcg aagcaatctg
    12121 gtaagtgcca tcaagaacaa gagacgaatt gacgataaat taaaaaaacc tgcctcgtct
    12181 tctgtcaggg atttttcacc caccttactc gatttcggtc cgcttaaaat ttatctcgca
    12241 cgacactttg gcttttgcta tggtgttgaa aacgctattg aaatagcttt tactacgctc
    12301 gatgaaaatc ccggcaaaag aatttttctt ttaagcgaga tgatccacaa tccgcatgta
    12361 aacgccgact tacaacaaag aggcatccaa ttcctgcagg acacccacgg aaatcaattg
    12421 atatcgttcg atgaattaaa cgctgacgat attgtgttaa tacctgcgtt cgggaccacg
    12481 ctgcaaatcg aggaggtatt gaaagcaaag ggtattcaaa cggagaaata caatactact
    12541 tgtccttttg ttgagaaagt atggaaccgg agcgagcagg tcgcgcggaa gggctacagc
    12601 atcgtcgtgc atggtaaacc cacgcatgag gaaacacgcg ctacgttttc tcatgcgtct
    12661 gcatacacac caaccgtcgt gatcaacgac atgaaggagg caatagaatt aggcaagtat
    12721 ataactggtg agaaggagcc tgctttattt tatgatgaat ttaaagcacg cttctcgtac
    12781 gggtttgata ttacgaaaga cctggagcgt ttcggagtag taaatcaaac cacccagctt
    12841 gcaacagaca cgcaggctat cgccgaatat ctgaaggcat tggtgaaggt ccattacaac
    12901 ctggatgacg aaaacatcta cgagcggttt gccgatacgc gcgatacttt atgctatgct
    12961 acaaatgata accagtcggc tgtaacagga ttattaaaaa cgaaagcaga ttttgctatc
    13021 gtggtgggtg gctataacag cagcaacact tcgcatcttg tggagttgtg tgaagcacag
    13081 cttccaacct attttataaa cgatgcggaa aagatgattt catcgggaaa aatttttcat
    13141 tgcaactgga aaacaaagga agagtacatt actgaaaatt ttattcctca aaaagaaccc
    13201 gtgagcgttt tattaacgag cggagccagt tgtccggatg cattagttga acgcgtgatt
    13261 gaaaaactga aaagtttttt tccggcggct agaacattag gagaacttga agcagaattt
    13321 tattgagaca ggcagaaaaa aaataggccc gccctgaaaa gagctggccg ttgctaacct
    13381 atgaaaaaca cctatttaaa tttcttatct cggagggtgt tgcttttttg agccaccctt
    13441 attattaatt ttgttcgcgt tgttcttgtt tccgttgttg tgtggcggag cttgctgaac
    13501 ttctttttct ttttgctggt aattttgttg cctgttcttt tgctcgtttc gaagtaggtc
    13561 cttgaattgc cgctctgatg tgtaaacctt gtttactcgt tgggtgttac ttcctagtac
    13621 ttttctgaaa tttccctggt agcgttcttt tatttcaact acctttttct cataagctac
    13681 ttcatcgttt gcgtactgct gcctggcttg tcttatttcg ttagtgtaac tgttataaac
    13741 gggccagaaa ctctgagcct cctgcggagt gagatttaat tgctcggtca tataagccat
    13801 tttcacggcc tcaacccggc caccaccatc gtttccatca ggggactgtg cgagacaaaa
    13861 ataactatga aaaaataaaa ataacaataa tgtgtatatt tttttcatct ttttcatttt
    13921 agatacctcc tttctcttct cccggatcag cattattgat caggtattgc tcgatctctt
    13981 cgtccgacat attttgaagc agcatattta catccagatc cctttgttcg tcagagcctt
    14041 gagaagtata gacagcggta gagttgtcgt ggtttaaata atctgtgatt tcagaatcgg
    14101 tcaactcgga aagtcctttt tgtatatcga ttcctttttt tggctgatta gcgatctgct
    14161 cgctgccagg tttcgaaaaa tacatgtaag cgcctcccag caatatcgca gcaacgcatg
    14221 cagcagcagc ataattgatc caactccggg tttttgcacc gaacgaaata attttagcgg
    14281 gcgtgttttc cttttgtttt tttaaaggcg tcaacgcatc aaaataacca tccggaattg
    14341 cataaacatt ggtcttcggt atcttactta gcaatggaga aagttcttca agctccgcct
    14401 gtaccgaatc acttgtttgc cctttaattt tttgcagaac attgctggca aagttctcga
    14461 agtatccttc cggcacagaa tagagcatct cgcccacacc gtctaacatt ggaatactgt
    14521 cgtgaacccc tatgttttca agaataattg tggagagttg gtcgaaataa cctgtgggca
    14581 ccgagtatgg attcgtccgc ggaatcgatt caacaaagat ccgtgacatt acatcccggg
    14641 gtagattgtt aaaatagtca ggagaaataa aatacaaatt gctcctgttg gcattcagta
    14701 aaatagtact tcctgcttcc ttcagctcgg tcaatatgtt aatattatcc tccatttgct
    14761 ttggtttgac caatatccct gtttgccgtt taattatttt taatgaattc ctctattttt
    14821 tttaccgcgt gatgatagct ggcttttaag gctccttcgc ttgtatccag aacccggctc
    14881 atttcttcat aaggcatttc atcataatac ctcaagttaa aaacaatttt ttgcttttcg
    14941 ggcagttgtt ggattgcgag ctgcagcttc cattccagcc tgtttgcgtc gaaatttttg
    15001 tcagcaacta ctttgttcgc cagccctgtt tctacgtcgc ttaagctaac tgaacccttt
    15061 tttttctgct ggtcaagaaa agtaaggctt tcattggtgg ctattcggta taaccacgtg
    15121 tacaactggc tgtcctctct aaaattttca agcccgttcc acactttgat aaaaacattc
    15181 tgcagtacat cattggcatc ctcgtgctca attaccattc ggcgtacatg ccaatataat
    15241 ttctcctggt attttttgat gatcgcggta aatgcccttt ctttcgtctc aggtatcttg
    15301 aactgttgta ataactccct atcgtcgatt tgcatgcagg gtattttttg taaaattaaa
    15361 aagccgatcg tttgatttga tccagcctag aaagtttaat aaacgttgct tactccgtca
    15421 agacagatca atttaaaact ggattttgcc gggtcaccaa ttcctcatct cttttgatgt
    15481 tgagctccca tgcccatgcc gtgcgcatca ttgcttcaag atcgtaactg atattccagc
    15541 caagatgatt gatggcgagg tcattattgg cataaatagc aatcacatca ccgggtctgc
    15601 gcggccctaa tttataattg agttttcgac ccgacacttt ctcaaacgct tttatggctt
    15661 caagcaccgt cactccattg ccgctgccta aattaaatat atcgcatttt gccctttgac
    15721 gcccgtccat gagatattgt aaagcgagcg tatgcgcgtg cgcaatatct gaaacgtgta
    15781 tgtaatctct tacacagctt ccatcccggg tgggatagtc atggccataa actatcaact
    15841 gtggaagctt gcctattgcg gtttgtgtga tcgcgggaaa taagttctcc ggtttgccta
    15901 gcggaagctc tccaataaga ccggaaggat gcgcgccgac agggttaaag tatcttagca
    15961 agatagaagt tccctcgtga accgttgaga aatcgtgcac gatctgttca cccatttgtt
    16021 tggtagcgcc gtatggagac tcagcttttt ttatcggtga attttcagtg accggtattg
    16081 aatccgggtt tccgtacacg gtgcatgaag acgaaaacac aaaatgagga atatgaaatt
    16141 cctttgcaca tctcaggaca ttcaccaggg aaaagagatt gttttcatag tattccaggg
    16201 gtttttctac agactcgccc actgccttga acgccgcgaa gtgtatgatc ccttttatat
    16261 cttcattctc ctggaatacc gcaagtgtct cgtcgaagtt tttcagatcg accttataat
    16321 tttttaatct tttacccgtg atcttttcaa taccatcaag aagataagtt gtagaccggg
    16381 aattatcgtc gattgagatc acgtcaaaac cactctcaaa caggtctacc accgtatgtg
    16441 agccaatata accacagccg cctgtgacca ggatcttttt cattttaaat catttcgttt
    16501 ttcatggtta cacaccataa gccaaaagaa gtgtgccagc ttatgggtac ttgcgtggca
    16561 agtaagcaaa gctaagcaga aaacaggctg aagaaccaat agaatgcagc ggccaataat
    16621 ccactcacag gtattgtaag gatccacgcc caaacaaggt tgacagttat cccccaacgt
    16681 accgcgctca tgcgtttagt tgctcccaca cctacgatcg cgccggcaat tgtatgagtc
    16741 gtactcaccg gcgctccgag gttagcagcc gtgaaaaggg tgatcgcacc tgccgtttcg
    16801 gcgcatacgc cctcaagtgg tgtgactttg gtgatctttg tgcccatcgt ttttactatc
    16861 ctccagccgc cactcatagt tccgaggccc atggccgtat agcacataaa aggcacccat
    16921 gaaggaatat gtgctatatc aggaattata ttttctgcaa ccattgccgc gcctattatt
    16981 ccaatagctt tttgcgcatc gcttccacca tgtcctaaac taaagctggc agaggaaaca
    17041 agttgcagtc gtttatacat gtttgcagtt ctgtacgcgg tttgtttccg gaagtggtta
    17101 taaaaataag agaccgtaaa aatgacgccc aggaccaata atgcccaaaa ttcaaagggc
    17161 tttttgaatt taatgaaaac gagacaagac gtaacggtga cgaaaatgat gagcattttc
    17221 agccaaaatt ttctttgaat tgtgacgagt gtaatgaaga cggagatgac cattccgatt
    17281 attggagcga gcaggataaa gatcagtgtt aagctaatgc cgccattgag tgaccagttg
    17341 atactgccga aaccggaatg cgcaacggct gcgccggcga aacctccgat taatgtatga
    17401 gatgaagatg acgggatgcc ataccaccat gtaagcaggt tccagcaaat tgcggcaatt
    17461 acgcctgcca gaaccaccgt aagatcgtac gctccggcat ttacagtttt tgcaacggta
    17521 ttcgcaacgc catggtctct gaaaataaaa taagccaaaa aattgaagaa agcagcccaa
    17581 accacggcct ggaacggtgt aagcactttt gtggaaacga tggtggcaat tgaatttgct
    17641 gcatcatgaa aaccatttat gaaatcgaag acaactgcca gtacaattat tacgaccagt
    17701 aatgtagcca tgtttaatgt gaggtcagat ttaaaaatta gttcgatgct caggcatact
    17761 ttacaattat tgactcgatc gcatttcccg catcttcaca tttgtctgtt gctgtttcca
    17821 tggcgtggta aacttctctt ttcttgatga gcatcttcac atctggttcc atttcaaaca
    17881 agcgctcaac acataggtca taaatgtcgt cagcctggtt ctctatgctg ttgatcttta
    17941 cgagcgcatt agtcatggcc tgcagatttt tcatgtcccg caaaccggta actgcaattt
    18001 ttatttcgtc taccgcgaag ccgatgaggt tcgcaagctt tacaatgccg tcatcgtaaa
    18061 tgttgatgtt gtaaaacgcg atcctcttag cggatgaata gatgtagtca gccacgtcgt
    18121 ctagcgtcgt cgcaagatag tgtatgtctt cgcggtcaaa cggagtgatg aacgttctcc
    18181 cgagttccgt aaatatccgg tgagtggtat cgtcattctt gtgctcggcg ttttctatct
    18241 ggcttaagat cgcgaagcgc ttatcctttt cggtttccgt gatcaacttt ttaaggagac
    18301 tgctcatctc ggcgacggta tttaccactt cttcgaagaa cgtataaaag attttgtctt
    18361 taggctgaaa aatcttcatt attgaattga gagacatacg gaaagttttt atcggttgtg
    18421 tgatattcca aacaaaataa tgactttaaa ggatttgacc ataatttatt accgtctata
    18481 tccgggaact ttcaacgcac gaatgaaaca actgcaaata aaggcccgga aagttgccct
    18541 gaatttttgt ggcataaaca tccaggtcat cgtatccgct ccggacggcg gtttcaattc
    18601 tgttaaaaat cgatggccgt gtgcgcaaca tattattttt gcatcagcaa cctcattaaa
    18661 aatgaactat ctcaactttc tgtacacagt cactgctgca ttctttattg ccgtgctcat
    18721 taaaacgacg tactttttca aaagcacttc agaacggacg gtttggaaat ggatctattt
    18781 caataaaggt tcgctctacg gctcccggac gcgccagaaa ctgcgtttga aaaagatgca
    18841 gaacctgctt tcgatcatcc ttctcgtgct atttctctcg gatatgctta ttgtattgtg
    18901 ccatatggaa agaattctct agccaatttt gttgcgtttg ctggaacggt gtgccgcagt
    18961 ttttcgttct cggcactgaa taggtattga ataactttgc cgctggaaaa ataagccagt
    19021 gaaactcgag caagacatct cacttaaacc gtataatact tttggcattg atgtaaaggc
    19081 aagatatttc gcacgctttt ccaacgttga agaactaact gagctactca acctgcaagg
    19141 caaaacgaac ctcaaggcac tgatccttgg cgggggtagc aacctcctgt ttacaaaaaa
    19201 cgtaaatggg tacgtcctaa aaaatgagct ggcaggaata cagttgatca aggaagatca
    19261 aaatcattat tacgtaaagg tttccgcagg cgagaactgg caccgctttg tgatgcactg
    19321 tgttgctcat aattatggcg gacttgaaaa cttaagtctc attccaggca atgtaggcgc
    19381 atcacccatg cagaatattg gcgcttatgg tgcagaattg aaagacgttt ttgaaaatct
    19441 tgaggcgctt cgtaaatcgg accgaacgat tcgcacattt actgcgaatg actgtgaatt
    19501 tggctaccgt gagtcggtct tcaagcgaaa atacaaggat gaatttgtga tattaaatgt
    19561 gacgttccgc ttaaataaga agcctgtctt caatacaagt tacggtgctg ttgcacagga
    19621 attggagaag atgggagtca tagaaccgtc gattcggtct atctcagacg ctgtgatcaa
    19681 tattcgaaag agtaagttac cggatcctgc tcaaatcggt aatgccggca gtttttttaa
    19741 gaatccaaca atatccctcg ctcagtttga gcaactgcaa aaaaaagtac acgacaaact
    19801 acaagctgcg gaaattccac attataaagt cgacgacagc cacgttaaga tccctgccgc
    19861 ctggctgatt gaacaatgcg gctggaaagg atatcgtgaa ggagatgctg gcgtgcatac
    19921 gaagcaggcg cttgtgcttg ttaattacgg caatgcgtcc ggcgaggcgc ttcatcagct
    19981 tgcaacaaag atcagcaaca gcgtcgaaac gaaatttggg atcgaattag aacgcgaagt
    20041 gaatatcgtt tgatggccaa cgatactcaa ctgttacccg gtgttagctg agcttactgg
    20101 gaaattttcg tccttctttc ttttaattca cgccaggtcg ttaggataat tccttcatcc
    20161 tgcaaagctt ttttgaaagc cggatccatc atggccaaca tgtccgcctt acgcgtggga
    20221 ccactgtcgc tgatgtgtgc aaagacttcg gtaggtgctg tgcagtgcat aatgatcatc
    20281 gttactccgg gcttcagtgc cttgagggct tcaatgtact tctgcgtttt gtaggcctgc
    20341 aatttcttat cgtcattttt tatttcgttc ggtatctgcc actcataact gtaattatat
    20401 aagtcatcta ataaaggaag tccggatgcc cagatggtct ttccaaccat tctcaactgc
    20461 tccatttgtg catcagaaaa atgttgttgc tgttgtatga gcgaagcctt tcctgccggg
    20521 aacataaccg ggatatgatt ttcgatgcca accttcacat agcgctgtag aaaagcagcg
    20581 ctcgcgaata aagttcccat gtgcgaatcg agatgtgttg gctcgaaacc cattgttcgg
    20641 gcacggtcca gttgcgccct gatctccttt tcaacttcat cagcggtcgc atgctgaacc
    20701 acgtctgcaa cttcaggcca catagctccc tcagtatcgg ttaatccggg aactaaactt
    20761 ttgccagcta gtggtcccca gcgatactcc ttccactctg atgttaatgt aaggtgtaaa
    20821 cctgcatcga tgtcaggatg ttgtttcaga taatgaacga aagcgggcac ccaggggcaa
    20881 ggcatcatca cgctgcacga cgtcgccact ccttttgtga gggcattgat ggcgccttca
    20941 tttgaatcga aactcatgcc cacgtcgtcg acatgcagta tcacaacctt cgcgttttta
    21001 ggatagccca attttt
//
LOCUS       DASQJI010000094         7604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_468115,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000094 DASQJI010000000
VERSION     DASQJI010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7604
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468115"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2097
                     /locus_tag="VEV83_03000"
     CDS             <1..2097
                     /locus_tag="VEV83_03000"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HYK44107.1"
                     /translation="YMNSEVWINGHSLGVHPYGYTSFRYDLTPYLNFDKPNVITVKVD
                     NSQQPNSRWYSGSGIYRNVWLVTTGAVYVDHWGTSVTTTNITDQSATINVNTVIRRTG
                     SLDNVLFSTIIYDANNNPVARKMNTPIELTDSITNVSQQIILTKPVKWSLKRPYLYKV
                     VTELIDGRTAIDDCITKFGIRTIDFDVDNGFLLNGEHVKINGVCDHHDLGCLGAAINR
                     RALERQFEILKGMGVNALRTSHNPPAPEVLDLCDSMGILVMDEAFDMWKKPKNRYDYH
                     LYWDDWHEKDLRSMVLRDRNHPSIIIWSIGNEIPEQWGGQDGKDSSGKTIARELASII
                     KGLDNTRYITSACNAPDDPNNQIIQSGALDLVGYNYHHELFSKFPETYPGKKFLATET
                     VSSLATRGHYDMPSDSIRRWPERWDKPFDKGNPDTTCSAYDNCSAPWGSTQEETWKVI
                     KKYNFLSGQFIWTGFDYIGEPTPYPWPARSSYFGLVDLAGFPKDLYYMYKAEWTDEPV
                     LHIFPHWNWKSGDTIDVWAYYNHADAVELFLNGKSLGVKKKQGDDLHVMWRVPYDPGT
                     LKAVSTNNGKKVLTQEIKTAGAAVKIVLTADRNKITADGSDLSFVTVSITDKDGNPVP
                     DASNLIHYSISGEGFIAGLDNGSETDLASFKGHDHKTFNGLGLAVIQSNGTKGKINLT
                     ATADGLQAASVEIKAE"
     gene            complement(2281..4641)
                     /locus_tag="VEV83_03005"
     CDS             complement(2281..4641)
                     /locus_tag="VEV83_03005"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44108.1"
                     /translation="MFRNYLKTAWRNLNKHKLFSFINIFGLASGMTVCMLALIKIKEA
                     YEYDNFHPESYRSYRVITNSTNKGGDHLLYASSPLPLSDFLKSNYSIIERSTAVHFSH
                     DAIIGNGKELPATEAYAGSDFYKIFGFKLSSGSPATNPQTVVLTRETAQRFFGNADPI
                     GRVITIGSSNNFLVTGILENPSSPSHLKFDVLVSLSSLPMQNNKVSVNWDDEGAAYTY
                     VQLKPGASEASLRAVLKNASKEVNALFLASANVNFLFDVQRLDDISPGSIPLHNLTGE
                     PIVPNLVIFAVIGLAMLLLAFFNYVSLTLARALDRAREVGVRKVAGASRRHVMMQFLS
                     ESLLVAIFAFFLACIEVRLVSTLPVVQNLIGNFKYDAQLWLYFIAFTAFTGIFAGWIP
                     ARVFATLQPVKVLKGKFNSKLFGGVGLRKALSVIQFAVSLVAIVILFVFYKQSLFMVT
                     ADYGFEKREMLNIRLPQNSYQKLAPAFSAVPGVESVSAASALFGFSGGNTKFIKRDRT
                     ADSIAGNYFSVSPTFITDTKLQLIAGENLPASSPNNNAHFVLINEKASQALKFKDPGA
                     AVGNTVLLNDTTRCIIAGIVKDFHYASFMTSIQPLLLANQQDEYAVLNLKISPSAAAN
                     IIPALEAAWKKLYPHQPFLASWYDKELTHEHLHKDDLVFLGLLTIMALSIACLGLLGI
                     VIYTTKNRAKEVSVRRVMGANVWRVVIEISRGFAGLLLIATCIGLPIGFVIGGEFLRQ
                     YAYRISVSVSLLAESAAALFVLGGLTIIWQTYRAANANPVVALRGE"
     gene            complement(4734..7160)
                     /locus_tag="VEV83_03010"
     CDS             complement(4734..7160)
                     /locus_tag="VEV83_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44109.1"
                     /translation="MVKNFFKVAFRNITRHKGFSFINIAGLTFGLTACILIGLFVWDE
                     NQYDKFIPGGDQVYRLYDEYTNHDGTQQLAVSPPMFATTLQQEYPEVEQTARILMTAD
                     YKPLFEAGKNKFYEPSGYFVDSTFFQIFPIKFEYGSPVNALDAPNSIVLSTEMAQRFF
                     GDGNPVGKQLMMDKTPYLVRGVFEKNPKFHLQFNYLVPLSAAQIPPERMESWGWHQFF
                     SYVKLKRGTNVQALEAKFQKEAYQKAKAVSNDPTTSEKPFLQPLTDVHLYSSNFKFDP
                     AQRGNITYVNALTIIAIFILLIACFNFVNLATAKSLQRAKEVGVRKSVGADRKQLMLQ
                     FIGETILLSFISIIIAVALAFLLLPWLNEFTGKHISVGLFANPMVIFLMIGLSLVVGI
                     TAGFYPALVLSGFKPIKVLKGTITADEEPGKIPWLRHGLVVTQFTLSVLLIISAIVVF
                     KQVNYLHNKDLGFNKEQIMFFPMRGDNMFKNTDAFKNELLKTPGVSSVSIGYGFPGDA
                     VAGDEIIVPRNGQQTQQSATQLMVDYDYIKTLGLQIVAGRDFSKDMKTDKDHAWIINE
                     TAVKQLGFGTPQKALGQDLYWHPWGASNPDSLKTGKVIGVVKDFNYKSLYDKVETTVL
                     QIFPDAAWKVAVKMNTAGIGNAIAGVRNAWNKFSPEYPIEYKFLDENFEEMYNSEDKL
                     RSLLWIFTGIAIFVGCLGLFGLAAYTAERRRKEVGIRKVLGASTEGLVILLSRDFIKL
                     VFISLLIASPVAFIFMNKWLQNFAYRINISGWVFVIAAFVALAIAFITVSFQAIRAAV
                     ANPVKSLRTE"
     gene            complement(7286..>7604)
                     /locus_tag="VEV83_03015"
     CDS             complement(7286..>7604)
                     /locus_tag="VEV83_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK44110.1"
                     /translation="LVSFMAVQRTKEVGIRKVLGASIKNIVYLFSKEFTILIGVAFII
                     AAPLAWFMMSDWLNNFAYRIKLNADAFVLAMVISLILAWLTVGYKSLRAAMANPVRSL
                     RTE"
BASE COUNT         2172 a         1751 c         1675 g         2006 t
ORIGIN      
        1 tatatgaaca gtgaagtttg gatcaacggg cattcgctcg gcgttcatcc ttatggatac
       61 acatcgttcc gttatgacct tactccttac ttaaactttg ataagccaaa cgtaattaca
      121 gttaaggtcg acaattcaca acaaccaaat tcaagatggt acagcggcag tggcatttat
      181 cgcaacgtat ggcttgtaac aacaggcgcc gtttatgttg atcactgggg cacgtccgta
      241 acaacaacga acataactga tcagtcagcg acgatcaatg tgaacacggt tattcgtcgc
      301 accggcagtc tcgataacgt gttgttcagc acaataatct acgacgcaaa taataatcct
      361 gttgcaagaa aaatgaatac accgatcgag ctgaccgaca gtattacgaa cgtctcgcag
      421 cagatcattt taaccaaacc ggtaaagtgg tcactaaaac gtccgtactt atacaaagtc
      481 gttactgaac tgatcgatgg cagaacggct atcgatgatt gcatcacaaa gtttgggata
      541 cgaacgatcg actttgatgt tgataacgga ttcttgctta atggtgagca tgtaaagatc
      601 aacggcgttt gcgaccacca tgaccttggc tgcctgggcg ctgctatcaa caggagagcg
      661 ctcgaaagac aatttgaaat tttaaaagga atgggtgtaa atgcgctgcg tacttcgcac
      721 aatccgccgg cgcccgaagt gcttgacctg tgcgacagca tgggcattct tgtgatggat
      781 gaagcttttg atatgtggaa gaagccaaag aatcgatacg actatcatct ctattgggat
      841 gactggcatg aaaaagatct gcgctcaatg gtattaagag accgcaacca tccatccatc
      901 atcatctgga gcattggcaa tgaaattccg gagcaatggg gaggccagga tggaaaagat
      961 tcatcaggaa aaacgatcgc aagagaactg gcatcaataa tcaaaggcct tgacaatacc
     1021 cggtatataa cttcagcctg caatgctccc gatgatccaa acaaccagat cattcaatcc
     1081 ggtgcgctcg accttgtggg ttataattat catcacgaat tattttcgaa gttccctgaa
     1141 acttatcccg gcaaaaaatt tcttgcgacc gaaactgttt catcgcttgc aacccgcgga
     1201 cattatgata tgccatcgga cagcattcgc cggtggcccg agcgttggga caagccattt
     1261 gacaaaggca atccggatac gacatgctct gcttacgata attgttcagc tccctggggt
     1321 tcaacacagg aagaaacatg gaaggtgatc aagaaatata attttctttc cggacaattc
     1381 atctggacag gctttgatta catcggtgag ccgacgccat atccatggcc cgcacgcagc
     1441 tcttatttcg gtcttgttga tctggcaggt tttccgaaag atctgtacta catgtataaa
     1501 gccgaatgga ctgatgaacc ggtattgcac atttttcctc actggaactg gaaatcgggc
     1561 gacaccatcg atgtgtgggc atattacaat catgcagacg ctgtagaact tttcttaaat
     1621 ggaaaatcct tgggagtaaa gaaaaagcaa ggagacgatc ttcacgtgat gtggcgtgtg
     1681 ccttatgacc cgggaacgct taaggcagtc tcaacaaaca atggaaaaaa agttttaaca
     1741 caggaaataa aaacggcagg cgcagctgta aagatcgtct taaccgcaga tagaaataag
     1801 atcacagcag atggaagcga cctgtctttt gtcacagttt ctattacgga taaagatggg
     1861 aatcctgtgc ccgatgctag caacctcatt cattattcaa taagcgggga aggttttatt
     1921 gcgggacttg acaatggcag cgagacagac cttgcatctt tcaaaggaca cgaccataaa
     1981 actttcaatg gcctcggcct cgcagtcatc caatcaaacg gaactaaagg aaaaataaac
     2041 ttgacagcaa ctgctgatgg gttgcaggct gcaagtgttg agataaaggc ggaatagttt
     2101 gaggttcgag gtttgaagtt tgatgttggt ttattggtta actcgttgat taggtaattg
     2161 gttattcgca ttcacattgt tacaatactg accactcatt atttatcact gatttctcaa
     2221 tcattccgtc tcaaattttc aattgcgtcg gtcggtagtc tccgcagcat ccgtattgca
     2281 ttactcgccg cgtaatgcta ctaccgggtt ggcgttcgct gcgcggtatg tttgccaaat
     2341 gattgtcagt ccacctaaaa caaataaagc agccgcactt tccgccagca gcgaaacgct
     2401 cactgatatg cggtatgcat attggcgtaa gaattcgccg ccaatcacaa atccgattgg
     2461 cagaccgatg caagtggcga tcaaaagcag gcccgcgaag cctctggata tttctatgac
     2521 cacgcgccac acatttgctc ccatcactct gcgtacactc acttccttcg cacgattttt
     2581 tgttgtgtaa ataacaatgc ccagcaagcc aagacacgct atggaaagcg ccatgatcgt
     2641 caacaatcca agaaatacca ggtcatcttt gtgcaggtgc tcatgagtga gctctttgtc
     2701 gtaccaactt gccaggaacg gttgatgcgg gtacaatttt ttccatgctg cttcaagcgc
     2761 aggaataatg ttagctgccg ccgatggcga aatttttaaa ttaagcacgg catattcgtc
     2821 ttgctgattt gcgagcaaca aaggttgaat tgaagtcatg aagctggcat agtgaaagtc
     2881 ttttacaatg cccgcgataa tacatcgggt agtgtcattc agcaaaacag tatttccaac
     2941 agcagctccc ggatctttaa acttgagcgc ctgtgacgct ttttcattta ttaagacaaa
     3001 atgcgcattg ttgtttggag aagaagccgg aagattttca ccagctatca attggagctt
     3061 cgtgtcggtg atgaatgtgg gactgactga aaaataattg cccgcaatgg aatcggcagt
     3121 cctgtcccgt tttataaatt ttgtattgcc gcctgaaaat ccaaacaatg cggaagcagc
     3181 tgaaacagat tcgacgcccg gaacggcgga gaatgcaggc gctaattttt gatatgaatt
     3241 ttgcggcaag cggatattca acatttcgcg cttctcaaat ccgtagtccg cagttaccat
     3301 gaaaagcgac tgcttgtaaa aaacgaataa gataacaatg gcgacgagtg aaacggcgaa
     3361 ctgaattact gagagtgcct tccttaaacc aacgccgccg aaaagtttcg aattgaattt
     3421 tcccttcagc accttaacag gttgaagcgt tgcaaagacg cgtgccggga tccatcctgc
     3481 aaaaattccg gtaaaggcgg tgaatgcaat aaaatacaac cataattgcg catcatattt
     3541 gaaattcccg atcaagtttt gcacgaccgg caacgtactt acgagtctca cttcaatgca
     3601 cgccaggaaa aatgcgaata tcgcgacaag caatgattcg ctcagaaact gcatcatcac
     3661 atgtcgcctg gaagctcccg caactttgcg cacacccacc tcacgcgcgc gatcgagtgc
     3721 cctcgcgagt gtaaggctta catagttaaa aaatgcaagg aggagcatag ccaggccgat
     3781 gactgcaaaa attacaagat tcggaacgat gggttccccg gtcaagttgt gtaacggaat
     3841 tgaaccggga gatatatcgt ccaatcgttg aacatcgaaa agaaagttga cgttggccga
     3901 tgccaggaat aatgcgttga cctctttgga tgcattcttc aacactgctc ttaacgatgc
     3961 ctctgatgcg cccggcttca attgaacata agtatacgct gctccttcat catcccagtt
     4021 tacagaaact ttattgtttt gcattggcaa tgatgatagg gaaaccagca cgtcaaactt
     4081 caggtgcgaa ggcgacgaag ggttctccaa aattccagtt accaaaaaat tattcgagga
     4141 gccgatcgtt atgacccggc caattggatc ggcgtttcca aaaaagcgtt gcgcagtttc
     4201 tcgtgttaaa acaaccgtct gtgggtttgt cgccggactg ccggatgaaa gtttaaaacc
     4261 gaatatttta taaaaatcgc tgcctgcata agcttccgtt gcgggcagtt ctttgccgtt
     4321 cccgattatc gcatcatgcg aaaaatgcac ggccgtgctt cgttcaataa tactataatt
     4381 gctttttagg aaatcgctca aaggcagcgg cgaacttgca taaagcagat gatccccacc
     4441 cttgtttgtt gagttggtaa tgacgcgata acttctgtat gactccggat gaaaattgtc
     4501 atactcgtaa gcttctttga tcttaatcaa tgcaagcatg caaaccgtca tgcctgatgc
     4561 cagcccaaaa atgtttatga aagaaaatag cttgtgctta tttaaatttc tccaggctgt
     4621 cttaagatag ttcctaaaca tagaacgatt tcgatttcag atttgcgatt gcagattgca
     4681 gatttaaaaa tgcagattca gcactcatca ctcattactc atctctcatt cactcactcc
     4741 gtccgcaacg acttcaccgg gttcgccacc gcagcgcgga tcgcctggaa gctcaccgta
     4801 ataaaggcga tcgctaaagc gacaaatgcc gcgatgacaa acacccatcc gctgatattt
     4861 attcgatacg caaaattttg aagccatttg ttcatgaaga tgaaagcaac cggcgaagcg
     4921 atcaacagcg aaatgaacac aagcttgata aaatctctcg acaaaaggat cactaaccct
     4981 tctgtgctcg cgccaagcac ttttcgtatg cccacttctt tccgcctgcg ttctgcggta
     5041 taagcggcga gaccaaacag accaaggcat ccaacgaaaa tggcgatgcc ggtgaaaatc
     5101 cacaacagtg atcgtagttt gtcttccgaa ttatacatct cttcaaagtt ctcgtcgaga
     5161 aatttatatt cgatagggta ttcaggagag aatttattcc atgcattcct cacaccagcg
     5221 atcgcgttcc cgatgccggc ggtgttcatt tttactgcga ctttccatgc tgcgtccgga
     5281 aatatctgca gcacagtggt ctccacttta tcatataaac ttttataatt gaagtctttt
     5341 acaactccta tcactttgcc cgtttttaaa gagtccggat ttgatgcgcc ccatggatgc
     5401 cagtacagat cctggccaag tgctttttgt ggcgtaccga aacccaattg cttcacagcg
     5461 gtttcattga tgatccatgc atggtcctta tcagtcttca tgtcttttga aaaatctctt
     5521 cctgccacga tctgcaaccc taatgttttt atgtagtcat aatcaaccat caactgcgta
     5581 gctgactgct gtgtttgctg gccattacgc ggcacgatga tctcatcgcc ggcgaccgca
     5641 tcgcccggaa aaccatagcc gatggaaaca gacgagacac ccggcgtttt cagtagttcg
     5701 tttttgaatg cgtccgtatt tttaaacatg ttatcaccgc gcatggggaa gaacatgatc
     5761 tgctccttat tgaagcccag atctttattg tgcaggtagt tcacctgttt gaaaacaaca
     5821 atggcgctga tgatcaacaa tacagacagc gtaaattgag ttacaacgag cccatgccgt
     5881 agccacggaa tcttccccgg ttcttcgtca gcagtaatgg tgcctttcaa cactttgatc
     5941 ggtttgaagc ccgaaagcac aagggccggg tagaagcccg ccgtgatgcc aacaacaagc
     6001 gataacccaa tcattaaaaa gatgaccatg gggtttgcga ataagccgac ggatatatgt
     6061 tttcctgtga attcgttgag ccaaggaagc aataagaaag cgagcgctac ggcaatgatg
     6121 atgctgataa agctgagtaa aatggtttcg ccgatgaact gcaacattaa ctgtttccgg
     6181 tcagcgccaa cactttttct cacgccaact tcctttgcgc gctgcaatga tttcgcggtg
     6241 gcgaggttta caaaattgaa acaggcgatc agcaggataa aaatggcaat gatcgtgagt
     6301 gcgtttacat aagttatgtt gccgcgttgc gcaggatcaa acttaaagtt cgacgaataa
     6361 agatgtacat ccgtgagcgg ctgaaggaac ggtttttcgg acgtggtagg atcatttgaa
     6421 acagccttcg ctttttggta cgcttctttc tgaaacttcg cttccaatgc ctgcacgttt
     6481 gttcctcgtt taagttttac ataactaaag aactggtgcc agccccaact ctccatgcgt
     6541 tccggcggta tttgtgcagc agataacggg accaggtaat taaactgcaa atggaatttc
     6601 ggattttttt caaatacgcc acgtacgagg taaggtgttt tatccatcat cagttgcttt
     6661 cctaccgggt ttccatcgcc aaaaaaacgt tgcgccattt ccgttgaaag cacgattgag
     6721 tttggagcgt cgagggcatt cacaggagac ccatattcaa acttgatcgg gaatatttgg
     6781 aagaaagtag aatcaacgaa ataaccactc ggctcataga atttgttttt accagcttca
     6841 aaaagcggtt tataatccgc tgtcatcaaa atacgagctg tttgttctac ctccgggtat
     6901 tcctgttgaa gcgttgtggc aaacatcggt ggtgaaaccg cgagctgctg cgttccatca
     6961 tgatttgtgt attcgtcgta gagacggtac acctggtcgc cacccgggat aaatttatca
     7021 tactggtttt catcccacac aaacagaccg atcaaaatgc atgctgttag tccaaatgtg
     7081 agcccggcga tattgataaa agaaaagcct ttatgccggg taatgtttct aaaggcaact
     7141 ttgaaaaaat ttttaaccat aatcgagagt tattatcatt taggatttac gattaaggat
     7201 ttaggattca cgctttctga ttcacaattc accattcaca attcacaaaa ggagactcat
     7261 tactcatcat tcatcattca tttcctcatt ccgtacgtaa acttcttacc gggtttgcca
     7321 ttgccgcacg taaagattta tacccgacgg ttagccacgc gagtatgagc gatataacca
     7381 tggccagtac aaacgcatcg gcattcaact tgatacgata agcaaaattg tttagccagt
     7441 cgctcatcat gaaccaggca agtggcgcgg ctattatgaa agcgacacct ataaggatcg
     7501 taaattcttt tgaaaagagg tacacaatat tttttatgct ggcgcccagc acctttcgaa
     7561 tacccacttc ctttgtacgt tgtacagcca taaatgaaac caat
//
LOCUS       DASQJI010000095         6005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_621697,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000095 DASQJI010000000
VERSION     DASQJI010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6005
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621697"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(323..2200)
                     /locus_tag="VEV83_03020"
     CDS             complement(323..2200)
                     /locus_tag="VEV83_03020"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK44111.1"
                     /translation="MHRLLFIFIAITWWHISIAQGLYMPRDIKQAYKKGTRSFDGNPG
                     KNYWQNRARYDITITAMPPDRNIKGKETITYFNNSPDTLLNPVIKLFLNIHKPGAPRN
                     YGATADYLTTGVEIDALTVDGDKFNSPSNPGIFTWFGLHLSNPLLPHDSIHLTFDWHY
                     TISEQSNREGMIDSTTYFLAYFYPRVAVLDDYNGWDRMNFMDNHEFYSDFNDYTVTLN
                     VPKNYIVWGTGTLQHPEKLLQPEILQRYNQSLSSNATVNIVTQENINAKNVTTQNDVN
                     SWQFVANDIPDMAFGISDHFVWDGCSAVVEDATGRRAGAFAAYNDTAKDYHFMAQYAR
                     HSLDWFSHKWPGVPYPYEKTTVFQGYAGMEYPMMANDETYSDTIRSRAVAEHEIAHTY
                     MPFYMGINETRYGFMDEGWATTLELLIGREDIGVEKAEQIYKAFRVARWTHDPSSDED
                     IPIITPGDALTGSGFGNNEYGKAALGYFAMMDFLGDELFKKCLQAYMQRWHGKHPTPW
                     DFFYTFNNVSGQDLNWLWSNWFFNPNYIDLAIEKVDKTNGGYNLTIQNIGGMAAPVNV
                     QISYDDGSADTLHQTPAIWKSDQKKTVVNITTKKQVRSIRLDGGIFMDADESNNVWQS
                     Q"
     gene            complement(2333..2758)
                     /locus_tag="VEV83_03025"
     CDS             complement(2333..2758)
                     /locus_tag="VEV83_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYK44112.1"
                     /translation="MTTLAKRNYRTIDNLFDEFFNNLPSAWGRENGWNVPPVNIHETN
                     EGFHLELVAPGLKKEDFKVALDKGLLTISYEKKAENETNEYKTHRREFSVTNFKRSFR
                     VDDAISVDGIEAKYEDGVLKLYLPKKEEVKVLPKEINIQ"
     gene            3095..4399
                     /locus_tag="VEV83_03030"
     CDS             3095..4399
                     /locus_tag="VEV83_03030"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HYK44113.1"
                     /translation="MYPNLYYLFKDAFGWNLPALKIINSFGFCVALSFLAAAWLLIKE
                     LKRRQAAGTFTYKEVEITVGEPARTLDLALNFILGFLLGYKILGVFIIKGAMNDPQEF
                     IFSANGSYPAGILLGLFFAGMKWWEKNKSKLPKPEKRVIRIWPSDRVGDMTIIAAVFG
                     FLGAKIFDNLENWNRFVEDPWGNLFSPAGLTFYGGLICASAALWYYFKRNKISFIKIA
                     DATAPSLMLAYALGRIGCQVAGDGDWGIINSAFMSNADGTVQLSNSSTAFTRTLTENA
                     TFYLNQFGSLGAVQHAPVRPFLGLPNWMFAYSYPHNVNNEGIPLFGCTWDNYCNHLPL
                     PVFPTPLYEIVVCLILFAVLWSIRKRIQTPGKLFAIYLILNGIERFFVEQIRVNTKYH
                     FLGVNPTQAEIIALGLIVAGLLLYWYSPKLKTAKVVQMPAPD"
     gene            complement(4396..4818)
                     /locus_tag="VEV83_03035"
     CDS             complement(4396..4818)
                     /locus_tag="VEV83_03035"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HYK44114.1"
                     /translation="MFESYITTKDEAVCHLFLHCCFRDGTFSQEEIDNVSSKFVDLQI
                     HRDLNFKEELQHYRTYQNGLEDETEYLRYLAKLITPVQDLALYSYCVELCLSDGLMSS
                     TEELLLKRIAVILEIEEEQSTIDNLMIQRKAVELEKIF"
     gene            5172..>6005
                     /locus_tag="VEV83_03040"
     CDS             5172..>6005
                     /locus_tag="VEV83_03040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK44115.1"
                     /translation="MIPRDGNTISLWQETVDQFNAQNTPGVNTEFDVAIVGGGITGVT
                     TALVLQAAGKKCILFEAYNLCFGTTGGTTAHLNTLLENPYSTIIKDFGKENAQLVARA
                     CKGALELVRANIERYNIDCGFDYTSAYLFAQTEEQVSELEKIYDACAEVNVPTTYADT
                     LPVNIDFKKAILVEKQAQFHPVKYVQALARAFENSGGVILQQCPVKDVKEDEPIELKT
                     PKGSFRSRYLIYATHIPPGVNLLHLRCAPYRSYAIAVTLKDKKYPRELIYDMYDPYHY
                     IR"
BASE COUNT         1614 a         1341 c         1297 g         1753 t
ORIGIN      
        1 atcttctccg ccggatcttt gtttttgaac agtctcgtaa acacttcctg ttcctttttg
       61 caaaccgaag tcgacgccat ttggcggttt ttgtaatatt atgcggagag ttaattcgtt
      121 ttccattgca aataattttg ccgcactaag atgagattta ttggacacag acacacggat
      181 gagacggatc aacacgcatt tcccttaagc aaaagcaaaa gattgcaaca actcacgggc
      241 tacgagtgtc aaatgatcat ccgtacccgc aggccgtgtc atccgtgttg catttctttt
      301 ctttagccat tcccgttcca ttttattggg actgccacac attattgctt tcatcagcat
      361 ccataaaaat gccaccgtct aaacggatcg atcttacttg ctttttggtc gtgatgttta
      421 caacagtttt cttctgatcg ctcttccaaa tagccggtgt ttgatgcaat gtgtctgcac
      481 tgccatcatc gtaacttatt tgcacattaa ccggtgcagc catgccgcca atattttgta
      541 ttgtgaggtt gtacccgcca tttgtcttgt ccactttttc aatagcaagg tcaatgtaat
      601 tcggattaaa gaaccagtta ctccacagcc agtttagatc ctgaccggaa acattgttaa
      661 acgtataaaa gaagtcccag ggagtcgggt gtttcccgtg ccagcgctgc atatatgcct
      721 gcaagcattt cttaaaaagt tcgtctccca aaaagtccat catcgcaaaa taaccgaggg
      781 ccgctttccc atattcatta ttaccaaagc cacttccggt taatgcgtcg ccgggcgtaa
      841 tgattggaat gtcttcatcg gaagagggat cgtgcgtcca ccgggctacc ctgaacgctt
      901 tgtaaatctg ctccgctttt tctaccccga tatcttcccg cccgatcagt aactcaagcg
      961 ttgtggccca gccttcatcc ataaatccat aacgggtttc atttataccc atgtagaacg
     1021 gcatataagt gtgggcgatc tcatgttccg caaccgcccg cgatcgaatg gtgtcagaat
     1081 aagtttcgtc attcgccatc ataggatact ccatgcctgc ataaccctga aagaccgttg
     1141 tcttttcgta aggatacggc acaccaggcc atttatgtga aaaccagtca agtgaatgcc
     1201 tcgcatactg cgccatgaaa tgataatctt tggccgtatc gttatatgct gcaaacgcgc
     1261 ccgcacgcct gcccgtagca tcctcaacaa ccgcactgca tccgtcccac acaaaatgat
     1321 cactgatgcc aaaagccata tcgggaatat cgtttgccac gaactgccaa ctgttcacat
     1381 cattttgcgt ggtaacattt ttcgcgttga tgttttcctg ggttacgatg ttgacagttg
     1441 cattagagct gagcgattga ttgtagcgtt gcaaaatttc aggctgcaat aatttttccg
     1501 gatgctgcaa agttcctgtt ccccaaacga tataattttt cggaacgttc aacgtgacag
     1561 tatagtcatt gaagtcgctg tagaattcat ggttgtccat aaagttcatc ctgtcccagc
     1621 cattgtagtc atccaacacg gcgacacgcg gataaaagta tgcgaggaag taagtggttg
     1681 agtcgatcat gccttcgcgg ttactttgct ccgatatagt ataatgccag tcaaaagtca
     1741 gatggatcga atcgtgtggc aaaagcggat tggaaaggtg gagtccgaac caggtaaata
     1801 tccctgggtt gctgggagaa ttgaatttgt cgccatccac cgtaagcgcg tcgatttcaa
     1861 cccccgttgt tagataatcg gcggtagcgc cgtaatttct tggcgccccc ggtttatgaa
     1921 tattcagaaa taattttatc acaggattta aaagcgtatc ggggctgtta ttgaaatatg
     1981 tgatcgtttc tttccctttg atatttctgt ccggcggcat cgcggtaata gtaatatcat
     2041 aacgcgcccg gttttgccag taatttttgc cggggtttcc atcaaacgat cgggtaccct
     2101 ttttataagc ctgctttata tccctgggca tgtataatcc ttgcgcgatt gaaatgtgcc
     2161 accatgttat ggcgataaaa atgaataata atctatgcat gttgtttttt tgtaaaccga
     2221 tgaaggtagc gcgtgaaaaa aatatgccgt ttatgctttt tatgaacggc aataaaaaaa
     2281 ccccgcgtaa aaacacgggg tcttaaccaa aaccaactgc tacgaaaaaa aattattgga
     2341 tgttaatttc tttcggtaaa accttgactt cttctttttt cggaagatac agtttcaaaa
     2401 cgccgtcttc gtatttagcc tctatgccgt caacgctaat tgcatcgtct acacggaagc
     2461 tgcgcttaaa attcgtaacg ctgaactccc gacgatgtgt cttgtactcg ttcgtttcat
     2521 tctcagcttt cttttcgtag ctgatcgtga gcaaaccctt gtcgagcgct actttaaaat
     2581 cttctttttt caaacctgga gccactaatt ccaggtgaaa accttcattc gtttcatgaa
     2641 tgttcaccgg gggcacattc cagccatttt ctctgcccca ggcggaaggc aggttgttga
     2701 agaactcatc aaacaggttg tcaatggttc tgtagttacg tttagcaaga gttgtcatac
     2761 tattctgttt tttgtttaat taattaattt ggtacactta acacaaagca tgtaccatcg
     2821 gaaatttgaa tgaaaaatct tcacaaaagc gttcgctaaa atgacaagac ggctccatcg
     2881 tttatctttt gatgccagaa tgacttcaga tgtgcggtga ccagtgcttt gaatatttag
     2941 ccgcattcac gtcgccttag cgtttaatcg cctaaattgc gcccagatca ggctaattgc
     3001 atagaaatgc ttttccataa ggtgtatcca atatttcttt aaaaagcggc atctattttt
     3061 tagtaacatt gcacggtttt tttaaattaa aagcatgtat cccaatctat attatttatt
     3121 taaggatgcg tttggatgga atttaccggc ccttaagatc atcaacagtt ttggtttctg
     3181 cgtcgctttg tctttccttg ccgcagcgtg gcttttgatc aaagaattaa aacgaaggca
     3241 ggcggccggt acttttacgt ataaagaagt ggagatcact gtgggcgaac cagccaggac
     3301 attagacctc gcactaaatt ttattttagg ttttctgtta ggctacaaaa tacttggtgt
     3361 ttttattata aagggagcga tgaacgatcc gcaggaattt atcttttctg cgaacggaag
     3421 ttacccggcc ggaatattat taggcctttt tttcgccgga atgaaatggt gggaaaaaaa
     3481 taaatcaaaa ctaccaaagc cggaaaaacg tgtgattcgg atctggccga gcgacagggt
     3541 gggagatatg acgattattg ctgcagtctt cggattcctc ggcgctaaga tcttcgacaa
     3601 tcttgaaaac tggaatcgtt tcgttgaaga tccgtggggc aatttatttt cacccgctgg
     3661 cttgacgttt tacggcggtt tgatctgcgc ttctgctgca ctttggtatt atttcaaaag
     3721 aaataagatc agctttataa aaattgctga cgcgaccgcg ccgtcattaa tgctcgctta
     3781 cgcgctcggc cgtattggtt gccaggttgc aggcgacgga gactggggaa tcattaacag
     3841 cgcattcatg agcaatgcag atggcaccgt ccagttaagc aactcgtcga ccgcattcac
     3901 caggacctta accgagaacg caacttttta tctcaaccag tttggttccc tcggcgccgt
     3961 gcagcatgca cccgtgaggc cctttttggg tttaccaaac tggatgtttg catattcata
     4021 tccgcacaac gtaaataacg aagggatccc attgtttggc tgtacgtggg acaattactg
     4081 caaccatttg cctttgccag tttttcctac gcctttatat gaaatagtgg tttgccttat
     4141 tttgttcgct gtcttatggt cgatcaggaa acgaatccaa acgccgggaa agctgtttgc
     4201 gatctactta atattaaatg ggattgaaag attttttgtc gaacagatca gggtgaacac
     4261 aaaatatcat ttcctcggtg tgaatccaac gcaggcagag atcattgcac ttggtttgat
     4321 cgttgccggt ctgttgcttt attggtattc acctaaattg aaaacagcaa aggttgttca
     4381 aatgcccgcg cctgactaaa agatcttttc cagttcaacc gcttttcgct ggatcattag
     4441 attatcaatg gtgctttgtt cttcttcgat ttcaagaata actgcaattc gtttcagtaa
     4501 taattcttcc gtagagctca tcaacccatc gctcaaacac aactcaacgc aataagagta
     4561 taaggcaagg tcctgtacag gcgtaatgag tttggcaagg tatctcaggt attcagtttc
     4621 atcctcgagc ccgttttgat aagttctgta atgctgcaat tcttctttga aatttaagtc
     4681 acggtgaatt tgcaggtcga caaattttga agatacgttg tcaatttctt cctggctaaa
     4741 tgttccatct ctgaagcagc agtggaggaa caagtggcag acagcctcat ctttggttgt
     4801 tatgtagctc tcaaacataa atttttcctc tatgcatcaa gtttaatgcc ggggaaggac
     4861 gatggcagtg ttggcgctgg tagtcttcat aaattagttc gggtacagtc gtgaaactcg
     4921 aatacttaaa gagagccgac gcgtgcatca tggcatggat ttttctctta ttttcaaaac
     4981 taatttatga aaacacctat gagcaattca cctcaggtca ataaaaaaac acacgttgaa
     5041 aaaaccaggc ccgaaatccg cgataatctc gatagccgtg ccaacgagga gcaacaatcg
     5101 aggggcgacg atgttaccca taaccgcaag ccccatcaca atattaagtc aggcagaaag
     5161 gaaagctctc gatgataccg cgggatggca atacaattag cctctggcag gaaacggttg
     5221 accaatttaa cgcacaaaat acgcccgggg taaataccga atttgatgtt gccatcgttg
     5281 gcggaggaat taccggtgta accactgccc tggttttgca ggctgccggt aaaaagtgca
     5341 ttttgtttga agcatacaat ctgtgctttg gaacgacggg cggcacaacc gcacatttaa
     5401 acaccttact tgagaatccg tattccacta tcataaaaga tttcgggaaa gaaaatgcac
     5461 aattggttgc acgcgcctgc aaaggtgcgc tggagcttgt gcgtgctaac attgagcgat
     5521 ataatatcga ttgcggcttc gactatacct ctgcctatct ttttgcgcaa acggaagaac
     5581 aggtttcaga gcttgaaaag atctacgatg catgtgcaga agtgaacgtg ccgacgactt
     5641 acgcggacac gcttcctgta aatatcgatt tcaaaaaggc aattcttgtt gaaaaacagg
     5701 cgcagtttca cccggtaaaa tacgttcagg cattggcgag ggcatttgaa aattcaggcg
     5761 gcgtgatctt acaacaatgc ccggttaagg atgtaaagga ggacgaaccc atcgagctaa
     5821 aaacgcccaa aggcagcttc cgttcaaggt atttgatata cgccacacat attccaccgg
     5881 gcgttaattt gttgcattta cgctgtgcac catatcggag ttatgcaatc gcggtcactt
     5941 taaaagacaa gaaatacccg cgggaattga tctatgatat gtacgatccg tatcattata
     6001 tccgc
//
LOCUS       DASQJI010000096         6030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2925470,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000096 DASQJI010000000
VERSION     DASQJI010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6030
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925470"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1131
                     /locus_tag="VEV83_03045"
     CDS             <1..1131
                     /locus_tag="VEV83_03045"
                     /inference="COORDINATES: protein motif:HMM:NF014147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 30 protein"
                     /protein_id="HYK44116.1"
                     /translation="MKSPIAACDFASAGPWYSYDETKDDTLMKHFSIERDLAPNGLIT
                     FINSAKRFGKFQIESPMDFAPDWMYYSLKAGEKHIRPEYYNALSNYYCKYLQAYRDKG
                     ITIDYLNLFNEANNSWYSNVTYGEMGEMIKNYVAPRLGSEGLTTRIQLGETANRPEAL
                     EKFPSILNDPGVRKYIHSLTVHGYDWNNFSTLTQLHNAYPDLPIWQTEVCYALGNNVP
                     PGGPSKLPVYDFADGEYWGNMIVSDMKNWASAWIYWNMILDEHGGPWLVSVEHGDPDN
                     NVQHPVVIIDRSTSKTYYTGLYYYLAHFSKFVRPGAYRISATAEANQKNFVAFKNADG
                     SIVLNVINNGVDADFGVEWNNEMIMQELPAHSITTFRWQAIK"
     gene            complement(1137..2411)
                     /locus_tag="VEV83_03050"
     CDS             complement(1137..2411)
                     /locus_tag="VEV83_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK44117.1"
                     /translation="MAAGKKTTEKATPFSPYEKLAIALLATTQFTVILDFMVISPLGD
                     FLMKSLSLYPHQFGFVVSAYAFSAGVSGLLTAGFADRFDRKNLLLFFYVGFIAGTVMC
                     GLAHSYAMLLTARIITGLFGGVIGSISLAIVTDLFPIERRGRVMGFMQMGFGASQVLG
                     IPIGLYFANKWGWEAPFWMVAAIGGLTAVFIFIKLQPVNKHLAMRIDRSAFRHLLHTV
                     AKRNYRIGFTATALLSIGGFMMMPFGSAFAINNLHVTPHELPLLFMVAGVSSLFAMPL
                     IGKLSDKVDKYKIFAIASVYMMIFVVTYTHLSAQPLWVVMLFNILMMAGIFGRMVPAG
                     ALTTAIPDAQDRGAFMSINASLQQIAGGIAAAVAGSIVVQKTKFSPLEHYSTLGYVIV
                     CISTISLFLMYRVSKLIKSKHAPAKSREVAHV"
     gene            complement(2507..2686)
                     /locus_tag="VEV83_03055"
     CDS             complement(2507..2686)
                     /locus_tag="VEV83_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44118.1"
                     /translation="MEISEDRKLLSPAKKKIDTNVSASTETYTQKSEQQKTPDKKSSA
                     PPAPFYDELHFADYE"
     gene            complement(2911..3252)
                     /locus_tag="VEV83_03060"
     CDS             complement(2911..3252)
                     /locus_tag="VEV83_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44119.1"
                     /translation="MNTETRALTIKPHLLPISSPVELFGHVILVESYDTTGYVGCHAL
                     VALRDSPGVTVAVITTSKHHQMQLDTALSTGNLIAFWGTLLTNPPTPLGGTWAVPVYG
                     NIASIILYNFS"
     gene            3535..5082
                     /locus_tag="VEV83_03065"
     CDS             3535..5082
                     /locus_tag="VEV83_03065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK44120.1"
                     /translation="MKALAGWSYRRKLFVLIAAFFVVRLLLAFTIELGNDESYYWLYA
                     QHLKLNYFDHPPMVAFWIRIFSLNLSLAQFPGFLRLGSVIGCSLSTLFIFNCVKALST
                     ERAAWFAACLYNASFYAGITAGTFIIPDSPQMVFWTLSMWLLARITTDEKNWSNWIWF
                     GITSGLCIMSKVHGVFLWVGLGLYVLFYKRLWLANVRLYVAVAISIAICIPILVWNLR
                     YNFVTYSFDSQRINIHGFARNWYTFLRQACGQLLINNPFNVILILIALLTWRHHNMKR
                     LPALTILNFTGLLLASIILFISLYRADTLPHWSGPAYVSLIPLAAIWLDGRNKKRAGP
                     KVLYWALGGHVLFLVLSTLTIYHYPGNLGSKSNTNLGTDDLTLDWYGWKEAGKQFDSL
                     YEKDVRDGIMPEKTPVVCYKWWGAHQEYYFCRPAGIQMIGLGNIINLHEYMWMNRYRK
                     SEVNFQSAYCIVPSDELYDARSLYGAYYEKIDPAAEIKISRGGEPAHNFYIYRLTGWK
                     NDLPEIR"
     gene            5145..5627
                     /locus_tag="VEV83_03070"
     CDS             5145..5627
                     /locus_tag="VEV83_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44121.1"
                     /translation="MKIFITVSAVVGILISACTKTDVDPSKAVAGSSSDEATILKTRS
                     SLLIAHSWMYQEYDFHYIDQHHRGDIQYLRGGSNNVIDLDDTRITFRKDGSCVELDGG
                     YKYHGTWHFSDSTATLLIVDFTNWVDEDSILVLNNNHLKYTEPMGYHDKSYTELITAQ
                     "
BASE COUNT         1684 a         1318 c         1389 g         1639 t
ORIGIN      
        1 atgaagtcac cgatcgccgc ctgcgatttt gcatcagcag gtccgtggta ttcttatgac
       61 gaaacgaaag atgatacttt aatgaaacat ttcagtatcg aaagagattt ggctccaaat
      121 ggattgatca cttttataaa cagcgccaaa agatttggca aattccagat cgaatcgccg
      181 atggactttg cgcccgattg gatgtattat agtttaaagg ccggtgaaaa acatataaga
      241 cccgaatatt acaatgcatt atcaaactac tactgcaagt acctccaggc atatcgggac
      301 aagggcatca cgatagatta tttgaacttg tttaatgaag caaacaatag ctggtactcg
      361 aatgttactt acggggagat gggcgaaatg ataaaaaatt atgtggcgcc gcgtttagga
      421 tctgaaggac ttacaaccag gatacaatta ggtgaaactg caaacaggcc ggaagcgctg
      481 gaaaaatttc cttcgatact caacgatcct ggtgttcgca aatacattca ttcgctcaca
      541 gttcacggtt atgactggaa taatttttca acactcacgc aattgcataa cgcatatccc
      601 gacttaccaa tatggcaaac cgaagtttgt tatgcacttg gtaacaatgt tcctcccggc
      661 ggtccttcaa agttgcctgt atacgatttt gccgacggtg agtactgggg caatatgata
      721 gtcagcgata tgaagaactg ggcgtctgca tggatatatt ggaatatgat attggatgag
      781 catggcggtc cgtggcttgt ttctgttgag cacggcgatc cggataataa tgttcaacac
      841 cccgttgtta tcattgatcg cagcaccagc aaaacatact acacggggct atattattac
      901 ctggctcact ttagcaaatt tgtaaggccc ggagcataca ggatcagtgc aacagcagaa
      961 gcgaatcaga agaattttgt tgcatttaaa aatgctgatg gttcgatcgt cctgaatgtt
     1021 attaataatg gtgttgacgc tgatttcggc gttgaatgga acaatgaaat gatcatgcaa
     1081 gaattgccgg cacactctat tactactttc aggtggcagg caatcaaatg agttaactat
     1141 acatgagcaa cttccctgct cttagccgga gcgtgtttgc tttttatcaa tttgcttaca
     1201 cggtacatta gaaaaaggct aatagtgctg atgcacacga tcacatagcc aagcgtgcta
     1261 taatgttcca acggactgaa tttagttttt tgtacgacaa tgcttccggc aacggcagcc
     1321 gcaatgccgc cggcgatctg ctgcaaagag gcattgatgc tcatgaatgc accgcgatcc
     1381 tgcgcatcag gtattgcggt agtcagcgca cctgccggca ccatacgccc gaaaattcct
     1441 gccatcatca gtatattaaa caacattact acccacaacg gctgcgcaga aagatgcgtg
     1501 tatgtcacga cgaatatcat catatacacg gaagcaattg cgaagatttt gtatttgtcg
     1561 actttgtcgc tcagctttcc aatcaatggc atggcaaaaa gcgagcttac acccgctacc
     1621 atgaataaca acggcaattc atgaggagtt acatgcaggt tgttgatggc aaatgcgctt
     1681 ccgaacggca tcatcataaa tccgccgatc gaaagcaatg cggtcgccgt aaagccgatc
     1741 cgataatttc gttttgcaac ggtgtgcaat aaatgcctga acgccgaacg atcgatccgc
     1801 atagccaaat gtttgtttac cggttgcagt tttataaaga tgaaaactgc ggtcagtcca
     1861 ccaattgctg cgaccatcca gaaaggcgct tcccaacccc atttgtttgc gaagtacagg
     1921 ccaataggaa tacccaatac ctggctggca ccaaagccca tctgcatgaa acccattacg
     1981 cggccgcgtc gctctatcgg gaatagatca gtgacgatcg cgagtgagat ggacccgatc
     2041 acgcctccga ataagccggt aatgatccgg gcagtcagca gcatagcgta cgagtgggca
     2101 agcccgcaca taacggtgcc ggcgataaac cccacataaa aaaacagcaa taggtttttg
     2161 cggtcaaacc ggtcggcaaa gccggcggtg agcaaacccg agacgcctgc gctgaacgca
     2221 taggccgata ccacaaatcc aaattgatga ggatacaggc tgagagattt catcaaaaaa
     2281 tcgccgagcg gcgagatcac cataaaatca agaatgacgg taaattgggt tgttgcgaga
     2341 agcgcgatcg ccagtttttc atagggtgaa aagggcgttg ctttttctgt cgtttttttt
     2401 cctgctgcca tgggtgcttg cttaatgcaa atgcaaagta agcatagatc agtcaaggaa
     2461 gactttcaac aagaccataa cttttcctca agtcggaaat agctagtcat tcataatccg
     2521 cgaaatgcaa ttcgtcgtag aaaggtgccg gaggtgcgga tgatttttta tccggcgttt
     2581 tctgctgttc gcttttctgg gtataggttt ccgtggaagc ggatacgtta gtgtctatct
     2641 ttttttttgc agggctaagt aattttcgat cttctgatat ttccattcaa tgcatcatta
     2701 aaaacaaaat gaaccaaaaa agcttgttca acagggtgca cgtatattaa acgcccctgc
     2761 aagcgttttc gtttgctgac aggaaaaatt ttttgatgct tcccgtttct gctcgtctaa
     2821 cgttctggtt gtctcaatcg gtaagggtga agatctaacg ctgttaggtt aacacaagaa
     2881 aaaaagcaat gaaacgtcgt ttagctttta ctaagaaaag ttataaagta tgatcgacgc
     2941 aatattgcca taaaccggaa ctgcccatgt gccacctaaa ggagtcggcg gattcgtgag
     3001 taaggttccc caaaaagcga taagattgcc agtgctcaac gcagtgtcca gttgcatttg
     3061 atgatgcttt gatgtagtta tcacggcgac ggtcaccccg ggagaatcac gcaaagcgac
     3121 aagggcgtgg catcccacat atccagtggt atcgtaagat tctactaaaa taacatggcc
     3181 gaataattcc acaggagagg aaattggcag tagatgtggc ttaatagtta atgccctggt
     3241 ctcagtgttc atggtttgaa tttttgattt aattaaaaat tatgagagaa acttttgagt
     3301 aatgagctaa caaaaatcac ggcggtgttt agcaactaaa tataacacaa gaaaacggct
     3361 gttcaaagct atttgcaaaa aatacttcgc cggacctcgt tttgtttgct gcccttgaag
     3421 tagtcacaac gaaagtctca ttacatttga ccattactat tctacgcaaa atatcattcc
     3481 gcggcttatc aatcattcac tttgaacttg tagtccccaa aacattttaa atcaatgaaa
     3541 gccttagccg gttggtcata caggcgcaaa ctttttgtct tgatagctgc cttctttgtg
     3601 gtccggctac tactcgcttt tacaattgaa cttggaaacg atgagtcata ttactggcta
     3661 tatgcacagc acctcaagct gaattatttt gaccatcctc caatggttgc tttttggata
     3721 aggatatttt cactcaattt atcattggcg cagttcccgg gctttttaag acttggcagc
     3781 gtgataggat gcagtttgtc aacgcttttc atattcaact gtgtgaaagc gctgagtaca
     3841 gaacgcgcgg catggtttgc agcctgtctg tataatgcat ccttttatgc aggcatcacc
     3901 gccggaactt ttattatccc ggattcgccg caaatggtgt tttggactct aagcatgtgg
     3961 ctgcttgcaa ggatcaccac agacgaaaag aactggtcga attggatctg gttcggcatt
     4021 acatccggat tgtgtattat gagcaaagtg catggcgttt ttctttgggt gggtctaggg
     4081 ctgtatgttt tgttctataa acgactgtgg cttgccaatg tacgattgta tgtggcagtg
     4141 gcgatcagca tcgcgatctg catcccgatc ctcgtatgga atctccggta caacttcgta
     4201 acgtacagct tcgacagcca acgcatcaac atccacggct tcgccaggaa ctggtataca
     4261 tttttgcgac aggcttgcgg ccagttgctc atcaataatc cttttaacgt tatactgata
     4321 ctgatcgctc tgcttacgtg gcgacatcat aacatgaaac gattgcccgc gctgacgatt
     4381 ttgaacttca ctggcctgtt gctcgcatca atcatacttt tcatttcgct ttatcgtgcc
     4441 gatacattgc cacactggag cggaccagca tatgtatcgc tgataccgct tgctgcaatc
     4501 tggcttgatg gaagaaataa gaaacgggcc ggtccaaagg tgttgtattg ggcgttgggc
     4561 ggacacgttt tgttcctggt tctgagcaca ctcaccatct atcattatcc gggtaacctg
     4621 gggagcaagt cgaatacgaa tctcggcacc gatgatctaa cgttggattg gtatggctgg
     4681 aaggaagcgg gcaagcaatt cgattcgttg tatgaaaaag atgttcgtga tggaatcatg
     4741 ccggaaaaga caccagttgt ttgctacaag tggtgggggg ctcaccagga gtattatttc
     4801 tgcaggcccg caggcataca aatgatcggg ttgggcaata tcataaatct gcatgaatat
     4861 atgtggatga accgttaccg gaaaagcgag gtcaattttc agtccgccta ttgcattgtg
     4921 ccttcagacg aactgtatga tgcgcgcagc ttatacggtg catactatga aaaaatagac
     4981 ccggctgctg agatcaaaat ttccagaggt ggcgagccgg cgcataattt ttacatatac
     5041 cggctaacag gttggaagaa tgacctgccg gagatacgct aaagcaacct tttcctttct
     5101 gcaagagttt atccaaataa ccttgttcat tcaaaacaat aaccatgaaa atattcatca
     5161 ccgtttctgc cgtggttggc attttgatat cggcttgcac gaagactgat gtcgatcctt
     5221 ccaaagctgt cgccggaagt tcctccgatg aggcgacgat tttaaaaacc cggtcatcgt
     5281 tgcttattgc acattcatgg atgtaccagg aatatgactt tcattatata gaccagcatc
     5341 acaggggcga tattcaatat ttgcgcggtg gcagtaacaa cgtgatcgat cttgacgaca
     5401 cgcgcattac attcaggaaa gatggaagct gtgttgagct ggacggaggg tataagtatc
     5461 atggcacctg gcatttctcg gacagtactg ccacgctttt gatcgtcgat tttacaaact
     5521 gggttgacga ggacagtatt ctcgttttaa acaacaatca tctgaagtac actgagccga
     5581 tgggatacca tgataaatcc tacacagaat tgatcactgc acaataagcg cgcaagagag
     5641 cgacgagtta tatattttga atgttgctgg atgcgcacac acaatcgctt accaaaaatt
     5701 attttaattt cagcggatgt tacattttcc gcgggtgttg atttcatttt gtttcttttc
     5761 atacctcagc ttttttttcg ttgcgtgtaa tactgatcaa agaaaagctt cagccaacaa
     5821 tcatgattcc gctcaacaat catggctgct tccctttgtg aagcaggatg ctgttaatcc
     5881 gatcatgcac cctggcaacc tgagcttcga atgtccgatc caggagaagg ttgtgaaatg
     5941 ggaaaacaaa aacgtctaca atcccgcggt ggcagtgaag aacgatacgc tttttatgct
     6001 atatcgagcg caggacagcg ccggttgctc
//
LOCUS       DASQJI010000097         3679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_929306,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000097 DASQJI010000000
VERSION     DASQJI010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_929306"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1341)
                     /gene="feoB"
                     /locus_tag="VEV83_03075"
     CDS             complement(<1..1341)
                     /gene="feoB"
                     /locus_tag="VEV83_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HYK44122.1"
                     /translation="MAAPRKSIHIALVGNPNSGKTSLFNALTGLHQKVSNFPGVTVDK
                     KTGVSTLDEEASSTLIDLPGTYSLYPRRADEWVAYKVLMKADEQIKPDVILLIADASN
                     LKRNLLFCTQVIDLKYPVVIALTMMDLARKKGFEIDVAGLSLELGVPVVPVNPRKNKG
                     IAELRKSLALTAKKTQSAQRDFIDNHALAPKAIDTVKHIFPGMSDYGAMHHLMNHESF
                     PLPATIQDVIERAEVDNHFNAPKTQAEEILKRYSRIKQVMKQNVIEPDPLQRKLFTEH
                     LDNILLHRVWGYFILLTVLFLLFQSIFWLAQFPMNAIDWSFSQVSGWLNNTLQESWWS
                     DLLVNGLLAGLNGILVFVPQIMILFGLITLLEDSGYMARISFLSDKLMRKVGLNGKSV
                     MPMISGFACAVPAIMTTRNIENRKERLLTILVTPLMSCSARLPVYTILIALVIPN"
     gene            1558..3198
                     /locus_tag="VEV83_03080"
     CDS             1558..3198
                     /locus_tag="VEV83_03080"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYK44123.1"
                     /translation="MKRLWLILVIIGTVNLVEAQNKKLKAKADKITATNLQTHIQYLA
                     SDKLEGRRAGTPGELLATQYISDVFGKYKLEPKGDNGYVQEFEINQGKQFTTPANTFT
                     VNGQKLEIKNDFYPLAFSANGAATGSVSPLLREEHEIWFWNVADLLEDNANNPHFDIL
                     GAVKQEAQNDAAKGAKALIVYNTSSAADNILFEKQDTSQAVSIPVVYLTKDGAQKYFG
                     DPTNIYDVGVGVDLQVDNRKAHNVIGYINFNAPNTVVLGAHFDHLGYGEDGNSLDGQG
                     EIHNGADDNASGTAALMELGRLLYATKAHNNNYLFIAFSGEELGLLGSKYWLQHKTTN
                     ANINYMINMDMVGRYDPNRKLTIGGYGTSPTWGEVLTKTTDPNLVTMFDSSGAGPSDH
                     MSFYTDSVPVLFFFTNSHSDYHKATDDADKINYKDETEIVDYIVNIITSTDDKGKLTF
                     TKTRDADARPVSLPVTLGVIPDYAYSGNGLRIDGVSKGKIAERIGLKAGDVLMQLGDY
                     KFVDIQTYMQALQHFKKGDQTTLRISRGGEEMSFDVQF"
     gene            3240..3677
                     /locus_tag="VEV83_03085"
     CDS             3240..3677
                     /locus_tag="VEV83_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPExxxVDY family protein"
                     /protein_id="HYK44124.1"
                     /translation="MTKLKLDLEGIEDDFFSGARLLGIMSLMKNYRFCWLINGELGFD
                     FRLNADVEIQLKRKGRYYFFPVYQFWQTECELEHYIYHNQFEGEYLLPEFKHLDFLWL
                     VKSDRIAEDDFINLQQDLKNIDGIQLVAELTHEKIKNKTNLIF"
BASE COUNT         1089 a          827 c          843 g          920 t
ORIGIN      
        1 gttcggtata acgagagcga tcaaaatcgt gtacacgggc aagcgggcac tgcaactcat
       61 caacggggtc acgaggatcg taagtaacct ttccttcctg ttttcaatgt ttcgtgtcgt
      121 catgatcgca ggtactgcgc atgcaaagcc actgatcatc ggcatcacac ttttaccgtt
      181 cagtccaact ttacgcatca gtttgtcgct taaaaaacta atacgcgcca tataacccga
      241 atcttccagc aacgtgatca agccgaacaa gatcatgatc tgcggaacaa aaaccagaat
      301 tccattcaga ccggccagca aaccgttaac taacagatcg ctccaccacg attcctgaag
      361 cgtattgttc agccagccgc ttacctgcga aaaactccag tcgatcgcat tcatcggaaa
      421 ctgagccagc cagaatatac tttgaaaaag caggaacaat accgtgagca ggatgaaata
      481 accccacaca cgatgcagca atatattgtc gaggtgttcg gtaaaaagtt ttcgttgcaa
      541 cggatcaggc tcgataacat tctgtttcat cacctgctta atccggctat agcgcttaag
      601 aatttcttcc gcctgggttt ttggcgcatt gaagtgattg tcgacctcag cgcgttcgat
      661 cacatcctgg atcgttgcag gtagaggaaa actttcgtgg ttcatcaggt gatgcatcgc
      721 gccataatca ctcatgcccg ggaagatgtg tttaacagtg tcaatggcct ttggagcaag
      781 tgcgtggtta tcgataaagt cacgctgagc agactgcgtc ttcttcgccg tgagtgcgag
      841 agactttctc aactcagcga tgcctttatt ttttcgcggg ttcaccggca cgacgggcac
      901 gccaagttca agcgataaac cagcaacgtc tatctcaaaa cctttttttc gcgcaaggtc
      961 catcatagtg agcgcgatca cgacaggata tttcagatct atcacctgcg tgcagaaaag
     1021 aagattgcgt tttaaattgc tcgcgtctgc gatcagcaag atcacgtcag gcttgatctg
     1081 ctcgtcagcc ttcatcaata ctttgtatgc tacccattcg tccgccctgc gtggatacag
     1141 gctataagtg cccggcaggt cgataagggt tgacgatgct tcttcgtcga gggtactgac
     1201 gcccgttttt ttatcaaccg taactccagg aaaattgctc actttctgat gcaaacccgt
     1261 gagcgcattg aataatgaag tctttccgct gttcggatta cctaccagtg cgatatgtat
     1321 gctcttacgt ggggccgcca taaatggggt gcaaaactaa ggttgatatg tttgaccgga
     1381 ttacgatatt ggatgtttcc gccatggcgc gtcctctccg gagcgcagac ggagaacagt
     1441 aatagggaag taaaagaatt ataacaaatg atttgaaatt taagaaacaa attatcattt
     1501 taatatttga ggctgtacaa aattcacatc gttaaatttg tattacaaca acatcacatg
     1561 aaaagactgt ggctgatttt agtgatcata ggcactgtaa accttgttga agcgcaaaac
     1621 aaaaagctaa aagcaaaagc tgataagatc actgcgacca acctgcaaac gcatattcaa
     1681 tacctggcaa gcgacaagtt ggaaggaagg cgagccggta cgcccggtga attactggct
     1741 acgcaataca tttcggacgt gtttggaaaa tataaactgg agccaaaagg ggacaatggc
     1801 tacgtccagg aatttgagat caaccaggga aagcagttca ctacacccgc aaacacattt
     1861 accgtgaacg gccagaagct cgagataaaa aatgattttt acccactcgc attttcagct
     1921 aacggcgcag ccacaggcag cgtgtctccg ttgttacgtg aagaacatga aatatggttt
     1981 tggaatgttg ccgacctgct cgaggataat gcaaataatc ctcatttcga cattttagga
     2041 gcggtgaaac aagaagcaca aaacgacgcg gcaaaaggag cgaaagcgct catcgtttac
     2101 aatacatcat ccgcggcaga taacatctta ttcgaaaagc aagatacttc gcaagcagta
     2161 tccatacctg ttgtttacct tacaaaggat ggcgctcaaa aatattttgg agatcctacg
     2221 aacatttatg acgtgggtgt tggcgtcgat cttcaagtgg acaaccggaa ggctcacaat
     2281 gtgattggat atatcaattt caatgcaccc aacaccgtag tgctcggcgc acatttcgat
     2341 catttgggtt acggggaaga tggaaatagt ttggacgggc aaggcgaaat tcataacggt
     2401 gcggatgaca atgcgagcgg cactgcagcc ttaatggaac ttggaagact gttatacgca
     2461 acgaaagccc acaacaacaa ctatcttttt attgcctttt caggcgaaga gctgggcttg
     2521 ctcggttcaa aatactggct tcagcacaag acaaccaatg cgaacatcaa ctatatgata
     2581 aacatggata tggttggccg ctatgatccc aaccgcaagc tcacgatcgg cggctatgga
     2641 acgtctccaa catggggcga agttctcacc aagaccaccg atccaaatct tgttaccatg
     2701 ttcgacagca gcggcgcagg tccgagcgat cacatgtcgt tctacaccga cagcgtcccg
     2761 gtgcttttct ttttcacaaa cagccattcg gattatcata aagcaaccga tgatgcggat
     2821 aaaataaatt ataaggacga aactgagatc gtcgattata tcgtgaatat catcacctca
     2881 accgatgaca agggcaaatt gacatttaca aagacaaggg atgccgatgc gaggccggtc
     2941 tcattgccag tgacgctcgg cgttatacct gactatgcat atagtggtaa cggtttacga
     3001 attgacggtg tgagcaaagg aaaaattgct gaacggatcg ggcttaaggc cggcgatgtg
     3061 ttaatgcaac tcggcgatta caaattcgtt gacatccaaa catacatgca ggcattgcag
     3121 cattttaaga aaggtgatca aacaacgctg cgtatctcga gaggcggaga ggaaatgagt
     3181 ttcgatgtgc agttttaaaa ggtttgaggt ttgatgtttg aggtttcaat acaacattca
     3241 tgacaaaact taagcttgac ctggagggaa tcgaagacga ttttttttca ggcgcgaggc
     3301 tgctcggcat tatgtcgctc atgaaaaatt accgtttttg ctggctcatc aacggcgagt
     3361 tgggctttga cttccggtta aacgcagatg tcgagatcca actgaaaaga aaaggccgtt
     3421 attatttttt cccggtttat caattttggc aaaccgaatg cgagctcgag cattacattt
     3481 atcacaacca gttcgagggc gaatacttac ttccggaatt taagcatctt gattttttat
     3541 ggcttgtaaa gtcagacaga atagccgagg acgattttat aaaccttcaa caggacttga
     3601 aaaatataga cggaatacaa ctagtagccg aactaacaca cgagaaaatt aaaaacaaaa
     3661 cgaacctgat cttctaaaa
//
LOCUS       DASQJI010000098         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2925647,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000098 DASQJI010000000
VERSION     DASQJI010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925647"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(278..1468)
                     /locus_tag="VEV83_03090"
     CDS             complement(278..1468)
                     /locus_tag="VEV83_03090"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HYK44125.1"
                     /translation="MKDCYIVDAVRTPIGKYGGRLSSIRPDDLLAHVITALMNRNPVD
                     PEAIEDVIAGDANQAGEDNRNVARMAALLAGLPPRVAGNTVNRLCASGLQAIMDASRA
                     IMCGEGMLYIAGGVESMTRAPFVMAKSDGAWNRKAEVVDSTIGWRFVNPALAKMYYPF
                     SMGETAENVAKQWNISREEQDQFALSSQEKYFAALKENKWEAEIVAVEMMNDRLITWF
                     SQDEHPRQTSLEKLATLRPAFVKDGNVTAGNSSGINDGAAALLLASEEAVKTFNLEPL
                     GKIASMGVAGVDPAIMGIGPVPASQKALMRAGLTAEELDLVELNEAFASQSLACIKEL
                     KLDAGKVNVNGGAIALGHPLGCSGARISATLLHEMKRKSLKYGLATMCVGVGQGAAII
                     YEGL"
     gene            1588..>2307
                     /locus_tag="VEV83_03095"
     CDS             1588..>2307
                     /locus_tag="VEV83_03095"
                     /inference="COORDINATES: protein motif:HMM:NF025174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HYK44126.1"
                     /translation="MLKRTTFLVGFLIVILSNSFGQKFTRTTDGIIVYPKQDLSGNTH
                     AIRIETINDRIIKVTASPAENFRDEESLIVVYHPSQKTSFSVDEFPDSIQLKTNALIV
                     TVSKKTGGVSFADVSSKRIVQEKQFNGRTFEPTAFEGEPSYHMKQSFSTTADDGLYGL
                     GQHQDGIVNYKGEQVFLFQNNTEVAVPLLVSGKNYGILWDNYSLTTVGDIRPFQPLSS
                     LKLFSADDQSGWLTTLYFNDKN"
BASE COUNT          618 a          580 c          489 g          620 t
ORIGIN      
        1 tacgacgccg ggaaataaca cggtattttt tagtggaagt aacggaagtg tatcgggtac
       61 aacaagattt ttgtcctgtt cgtcggtttc attgagtgga ataataggca ggaattctgc
      121 gtcctcatcc gtcagcaaaa agttgtcaat cttcatattc tgttcaaacg ccagtttgtc
      181 accaacaaat aaaataagtg cggtaaaagg cgaaggtaga aaggttcaat taaaatgcca
      241 caggttgaaa ataagcgtca aatacgcaaa ttgtcggtca aagaccctcg tatatgatag
      301 ctgctccttg tccaacacct acacacatag tcgcaagtcc gtacttcaag ctttttcttt
      361 tcatttcgtg aagtagtgta gccgatatgc gcgccccact gcaaccgagc ggatgtccca
      421 gcgcgatagc gccgccgtta acattcacct tgcctgcatc aagcttcagt tctttgatac
      481 atgctagtga ttgagacgca aaagcttcat tcaattctac aagatccagt tcttctgctg
      541 ttaagccggc gcgcattaac gctttttgac tcgccggtac aggaccaatg cccatgatcg
      601 ccgggtcaac accggcaaca cccatgctcg cgatctttcc gagcggctcc aggttaaatg
      661 ttttcacggc ttcttcactc gccaacaata atgcagcagc accatcattg atacccgaag
      721 aattcccggc ggtgacattg ccgtccttta cgaacgccgg tcttaacgtc gccagttttt
      781 ccagagatgt ttggcgcgga tgctcgtcct gcgaaaacca ggttattaac ctgtcgttca
      841 tcatttcaac cgcaactatc tctgcttccc atttattttc ttttagtgca gcaaaatatt
      901 tttcctgtga actcagcgcg aactgatctt gctcctcccg gctaatattc cattgtttcg
      961 ccacattctc agcggtctcg cccatcgaaa aggggtaata cattttcgcc agtgcagggt
     1021 tcacaaatcg ccaaccgatc gtggagtcaa ccacttctgc ttttcgattc catgccccat
     1081 cactctttgc catcacaaac ggcgcgcgtg tcatactttc aacaccgccg gcgatgtaca
     1141 gcattccttc gccacacatg atagcacgcg acgcgtccat gatcgcctgc agcccgctcg
     1201 cacacaaacg gttcaccgta ttgcctgcaa cacgcggcgg caaaccggcg agcaacgcgg
     1261 ccatacgcgc aacattacga ttatcttctc cagcctggtt agcgtctccg gcgattacgt
     1321 cctcaatcgc ctcggggtct acggggttcc ggttcatcag cgcggtaata acatgggcca
     1381 gcaggtcgtc aggccgaatt gagctcagtc gcccaccgta ctttccaatt ggagtcctta
     1441 ccgcatctac aatgtaacaa tccttcattg ccgttataac atttaaaaat gggtgcaaag
     1501 ataatccgct ttgcatcgct catctgatat gcgctaattc gaaagctgct tacttttatc
     1561 actttattat ttctttaaat gttggctatg ctaaaacgca ccaccttttt agtcggtttc
     1621 ctcatcgtca ttctcagcaa ttcctttggg caaaaattta ccagaacaac ggatgggatt
     1681 attgtgtatc cgaaacaaga cctgtcggga aatacacatg cgataagaat tgaaacaata
     1741 aacgatcgca taattaaggt aacagcaagt ccggctgaaa attttcggga cgaggaaagt
     1801 ttgattgtgg tttatcatcc atcacaaaaa accagtttca gcgttgatga atttccggac
     1861 tcgatccagt tgaagacaaa tgcactgatc gtaacggtga gtaaaaaaac gggcggcgtt
     1921 tcattcgctg acgtgagtag caaacggatc gtacaggaaa agcagttcaa cggtcgcaca
     1981 tttgaaccaa ctgcatttga aggcgagccg tcttatcata tgaaacaaag tttcagcaca
     2041 acggcagatg atggtttgta tgggcttgga caacaccagg atggtatcgt aaattacaaa
     2101 ggagagcagg tatttctttt tcaaaacaat actgaagttg cagtgccatt gctggtgtcc
     2161 ggcaaaaatt acggaatatt atgggataat tattcgctca caacggtcgg cgatataagg
     2221 ccatttcaac ctctgtcatc tctaaaactt ttttctgcgg atgatcaatc aggctggctt
     2281 accaccttgt actttaatga taaaaat
//
LOCUS       DASQJI010000099        12322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2464961,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000099 DASQJI010000000
VERSION     DASQJI010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12322
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2464961"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(388..963)
                     /locus_tag="VEV83_03100"
     CDS             complement(388..963)
                     /locus_tag="VEV83_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44127.1"
                     /translation="MNIKKILPFGVMLMLAGCGPSTKIEKTWTDPSFTKASVQSVKKV
                     LVMGLLNDESTRRIAEDKMVAAFKNITAVQSYSYLSASDTDRSAVEAKLKQDGFDGVV
                     VMRLANVDKSTSYVPGTTYGGWYGYRYGSSGYYTEDKTYYVETNFYSLTEGKLLWSGT
                     TSSLNPSKLDRTLDDIINTLKAQLQSQGLVK"
     gene            complement(1377..4559)
                     /locus_tag="VEV83_03105"
     CDS             complement(1377..4559)
                     /locus_tag="VEV83_03105"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HYK44128.1"
                     /translation="MTIVQEFMKVSAKRIAIKFLKISGITLVSIVALMFFLPLLFPNF
                     VATKIKTWANAVIITDLNFSKARLSFFNHFPALTLTLYDVSLKGSVPFQNDTLLKADE
                     IALGVDLSTLFSSRMRIDEIFLTKGDVQIKVDKNGQPNYNVYRTDTSTAVSNDTSTTQ
                     LKIELIEIDHTNLVYDDKSIPIVIAAKELNYTGKGDLSKAIFDLASNIEIDSFDLEYD
                     SMRYISAKQLQADLITKINTNSLAFVFEKNDLHINKLPVHFKGNFEFLENGYNMDFRI
                     FSHNTNLRDAFTALPPEYLSWLENTTVSGNTNLDAYLTGKYIEDKNIMPDLGFTMTVR
                     NGNIAHQDAPTPVSNLFLDFDTKLPSLNTDSLYINIDSLFFNMDEDYFSGVVQLKNLN
                     DPHLHAVMNSNLDLEKWNRTMGISAVDLKGKANLHFYADGGYKTTVVYHGLRKQPDTL
                     LSEIPRFRLSASLSQGYFKYASLPQSIHDITFNVNASCPDGNPDHSIFSIENVNATAL
                     NNFIKGYIKISGDEDLPLDVDLKTNLDLGDIKQFYPLDSLSLAVNGNLNIDLQCKGKF
                     NPDKKLFPVTKTFVSLKNGSIQTKYYPRPVEKIQAEVVVTCTSPSPRDVHVALQPVSF
                     QFEGQPFLLKADLKNLDDLRYNVTANGVLDIGKIYKVFAIKGYSVDGMVKTELALRGT
                     QADATAGRYDKLFNSGTLKIQNIVLITDIYPQPFYISTGVFRFEQEKMWFDAFKAHYG
                     KTDFGLKGYLTNVINYALKPGSPLIGNFDLSTPHFFADEFMVFADTSSTSGSNASATT
                     NTAAATAGVIIVPSDLSLTLNATAGRVSYTGLDIKDFKGQVMIDSSRLKLNQTGFYII
                     DAPVIMDATYQSLSPTKAFFTYHINAQNFDVRKAYNEIKIFHDLAPSAANAQGVVSID
                     YNLSGKLNSEMYPVYPSLKGSGVLSVKSVQMKGFKLMNAVSSATDKADVKDPDLSKVD
                     IKTSIENNIITLQRVKLRVSGFRPRFEGQMSFDGKLNLTGRLGLPPFGIIGIPFTVTG
                     TQDNPQVHLRREKDSDKIEETTEEPDTDEQ"
     gene            4928..6055
                     /locus_tag="VEV83_03110"
     CDS             4928..6055
                     /locus_tag="VEV83_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44129.1"
                     /translation="MKKFFLPYLAVAMSLLSVPAFSQTEGDSTAMLNLPGDNLDLYAV
                     LDLFQKSKTIEGFEKSLNDEKEGINNLDLNLDKKVDFIKVVTQKGEDSSYTFILQVDV
                     TKTEKQDVAVILLTKQNGRVSLQMVGDEELYGKDYVIEPKGNSSITANPGYKGEDPVV
                     VNVPASTVTVVQSAPIVQYVYSPAYVPYYPPYYYGYYPPWFGFATVMAVGIYRHNNWY
                     HHGGYYGGHYHGGNNNVIINNGNRNNINHYNNSRNRSNTVSNNMAKGSYGNRPSTSDR
                     ASTSNRASTSNRATTNNRPSTNNNVSNNRASTSNRATTNTRPSTNNSVSNNRASSSSL
                     NRPSTSNFSSSSMGSSRTRSSGSSSFSGGGMRSGGGGGRRR"
     gene            complement(6126..6611)
                     /locus_tag="VEV83_03115"
     CDS             complement(6126..6611)
                     /locus_tag="VEV83_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HYK44130.1"
                     /translation="MESKILKVLLPGFVITLMFACNEKKEEAAPVVVDKDQIKKEIQA
                     KEDEFASLYNNAEMKNIGYYADDATVFYQNKEPLVGKPAIVEFLKSDLTGNTNKISFK
                     TNEVFPSNDGNQVVEVGYYKVVDSANNPINTGNYMILFEKRDGKYVSVREMSASDMPL
                     Q"
     gene            complement(6966..8381)
                     /locus_tag="VEV83_03120"
     CDS             complement(6966..8381)
                     /locus_tag="VEV83_03120"
                     /inference="COORDINATES: protein motif:HMM:NF014335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HYK44131.1"
                     /translation="MKKQFTFILLTGLFQFHVQETLSQTTTNKAFSFGSYGRVGAGFS
                     PAIEGNIGRSLNLNGMGSIGGRMEEADYVELLAALHFKPEDRQGDTTVINMQARLAMY
                     SGKGQLIGNVSSTSAYGGVTVALPELYVEALNIRGSKWSAWMGAKFFRGYDVHIADYF
                     YFDDHSSQGFGVTYNRTSLAVLFPGNVDTGNSLPPNFYVNIIDETPRLGLRGRSMIVL
                     EHVIPFDDDKQKIKLLGEYHHLADATLEDTTTPYNYPAAAGWVFGVEHTINLNTVIGG
                     SFNQAAIRYGHGIANGGDGGNSKTFLTYGAPNLQTNKFDNAYSTTLVDHILVNVSPKY
                     TVNGYGIYTKSRGAADSLNKAPDYFGREIFNRKTEYAFGVRNFWYIKKWFHLITELHY
                     ANRKDGDQPSAAMTKFSLVPTFVPTAKADPWARPHLRVIYSIAKYNQFATDNLYSPYL
                     AEIGHKKWGQYIGIRAEWWLF"
     gene            complement(8446..8688)
                     /locus_tag="VEV83_03125"
     CDS             complement(8446..8688)
                     /locus_tag="VEV83_03125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44132.1"
                     /translation="MQEAKKNQGPEGGSKKKTRKEIEKKLEVALESLMPVLGEKKFRK
                     RIKRAGKILGQDVSGTRADGSFQFKKTKATAKESAE"
     gene            complement(8804..9487)
                     /locus_tag="VEV83_03130"
     CDS             complement(8804..9487)
                     /locus_tag="VEV83_03130"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK44133.1"
                     /translation="MKKIFISLVFLTSLASAAHSQNVRLNLYGGYVFDDKVDNSYSYS
                     EAGYFQGKIKGGFLWGGGLEFRLHEYYGLELLYQRLDTKAPIDYYGTIQGQHANIDLG
                     INYIMVGGARSLRPPGSKAEPYGGFMLGMAIIDAKSQELGDNSATKFAWGLRLGTNVW
                     ASDRVGIKLQMQLLSIPQGAGGGLYFGTGGVGAGVSTYSTMLQFALGGGLTFKLGGQQ
                     PHTTPTQPQ"
     gene            complement(9698..9943)
                     /locus_tag="VEV83_03135"
     CDS             complement(9698..9943)
                     /locus_tag="VEV83_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44134.1"
                     /translation="MESLNAQLRAVKQKFPEQGDRIEQLYEVDEDFRALCADYVLCMR
                     QLVEIEKEFSEKEHSMKEYKNIRRELEKELHDFIYNG"
     gene            10440..11255
                     /locus_tag="VEV83_03140"
     CDS             10440..11255
                     /locus_tag="VEV83_03140"
                     /inference="COORDINATES: protein motif:HMM:NF016974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018193 - peptidyl-amino acid modification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HYK44135.1"
                     /translation="METAAVLFAATRTELSIQKQNEAVPYPQIFSSFCNLTAAMHKNF
                     LIKYARLNLRTDFDSLQIETRELIHSNAWLPHVNKKHYTGEWQVLALRSAGGNLKHIV
                     ADQMNETAFIDTALMDQLPSVKKFTANLECPVMSVRLLNLKSGAIIKPHRDFDLCFEK
                     GEARIHLPIFTNEAVEFILDEERLLMKEGECWYINANLSHSVANYGRTDRLHLVIDCT
                     VNEWLKNIFNEAEKVMIEEKINVHEIQKVIRELRLQNTTMSNKLADQLAEKIR"
     gene            11400..>12322
                     /locus_tag="VEV83_03145"
     CDS             11400..>12322
                     /locus_tag="VEV83_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44136.1"
                     /translation="MSEDSFKNWIPYKLLRDNDDLKCEWLYVGDEPFLEPFFDSTIAR
                     CKQLPENFDHYKNVTALSTMLEWSAKVDAAEPAGFIFHVSRCGSTMVSQLLSMHTEHI
                     VLSEVPFFDDILRMPQIEKYTNAELFKGAVKLYSQKKTGSEKKVFIKTDSWHIRFHKE
                     IREMFPEIVFLLLYRRPDEVVRSLNRAAGMHCVPQFIDPQFFGIPDKVVTITDFYDYP
                     VKVIGKYLETYLEVAATDPNLLLLNYNEGMLPIIEKIGNRVGIIFSVDEQAKMKERLL
                     FQGKQPQLYFSPEPAIDTISDKFSGLFELYDR"
BASE COUNT         3472 a         2591 c         2588 g         3671 t
ORIGIN      
        1 ttagtttttt gaatcgaaga gaatgaagta atcaatgaca ggttcacact gtaaacactg
       61 accaactcat cactcatcac tcattattga tcttttgaaa taaatgatga atgatcagtg
      121 atgagttgag acgctgaaat gcacgcgact cgtttttttc tttcgtttga gtgataaata
      181 ttaaaggaca ggttcacact gtaaacgctg acccactcat cactcattac tgatctctta
      241 aatgaatgat gaacgatcag tgatgaggtg agacgttgaa atgcacgcaa ctcgtttttt
      301 tctttaattt gagtgataag taatcagtga caggttcaca ctataaacgc tgaccaactc
      361 atcactcatc actcattact gatcttccta tttcaccaac ccctgcgact gcaattgtgc
      421 cttcaaggta ttgatgatgt catccaatgt gcggtcaagc ttggatggat tcaaagatga
      481 ggtcgtacct gaccaaagca gtttgccttc agtaagagaa taaaaatttg tttccacgta
      541 atacgtcttg tcttccgtgt aataccctga actgccataa cgatagccat accatccgcc
      601 gtaggttgtc cctggcacgt atgaagtgct cttatctaca tttgccaaac gcattacaac
      661 tacaccgtca aatccatctt gtttcagttt tgcctcaact gcagatctgt ccgtatcgga
      721 agcactcaga taactatacg attgaacggc ggtaatattt ttaaaagccg ccaccatttt
      781 atcttcggca attctgcgtg tggattcatc attcaaaagc cccataacaa gaactttttt
      841 taccgattgc actgacgcct tcgtaaaaga aggatcggtc cacgtttttt caattttggt
      901 actgggaccg caaccggcca gcataagcat cactccaaac ggtaaaattt ttttgatgtt
      961 catagttttg attttcatgt agtaaaatta aagaacagcc tttatcattt aacaagcgca
     1021 tagttaccct tttctctgct atttgtcatt ttacaggttt atttaactgt taactgacga
     1081 aaatcagttt tttttattaa attgaagcgg aaattacacc ggttattcaa taactttatc
     1141 aacggtattt cccgatatct gatcaaaaaa aaattgtcgt ttcataaaaa tattttaaat
     1201 aggtgttttt cataggttag caacggccag ctctttttag ggcaggcctt tttttattta
     1261 cgatttcaga tctacgattt acgatttgcg cagaggttga tgcttcgtga agtttggtga
     1321 gaagacgttt atttacaact acagatttac gatttgcagg gcgatggccg agcatttcat
     1381 tgttcgtcgg tatccggttc ctccgttgtt tcttctatct tatcagaatc tttttcgcgg
     1441 cgcagatgta cctgcggatt atcctgtgtg cctgtaacag taaacggtat tcctataatg
     1501 ccgaatggag gtaaaccaag acggccagtg agattgagtt taccgtcaaa actcatttgc
     1561 ccttcaaacc tcggcctgaa accggaaacg cgtagtttga cgcgctgtaa tgtgatgatg
     1621 ttattttcta tggacgtttt aatatccact tttgaaaggt ccggatcttt tacatctgct
     1681 ttgtcagttg cactgctcac tgcattcatt agcttaaacc ccttcatctg tacactcttc
     1741 acactcaaaa ctccactgcc ttttaatgaa ggatagacag gatacatttc tgaattcagc
     1801 ttgccgctta ggttataatc gatcgagaca actccctgcg catttgcggc agatggcgcc
     1861 aggtcatgga agatcttgat ctcgttgtaa gcttttctca catcaaaatt ttgtgcatta
     1921 atgtgatatg taaaaaaagc tttggtgggt gaaaggcttt gataggttgc atccattatc
     1981 accggggcat caataatata aaagcccgtt tgattcaatt tcagcctgct gctatcgatc
     2041 attacctgtc ctttgaaatc ttttatgtca agcccagtat agcttactct gcccgccgtg
     2101 gcattaagtg ttaatgagag gtctgacgga actatgatca caccggctgt tgcagcggca
     2161 gtattagtgg ttgcagacgc attgctacct gacgtggaac ttgtgtccgc aaataccata
     2221 aactcatcag caaaaaaatg cggtgtgctc agatcaaaat tgccaattaa tggcgaaccc
     2281 ggctttagcg cgtaattgat cacgttcgtt aaatatcctt tcaaaccaaa atctgttttc
     2341 ccgtaatgcg ctttgaaagc atcaaaccac attttttcct gttcaaatcg aaatactccc
     2401 gtagatatat aaaatggttg cggataaata tccgtgatca aaacaatgtt ttgaattttt
     2461 aatgttcccg aattgaacag cttgtcgtaa cgcccggcgg tggcatcggc ttgcgtaccg
     2521 cgtaaggcga gctcagtttt taccatgccg tcaacactgt atccctttat ggcaaacacc
     2581 ttgtaaattt ttccaatatc gagcacgcca ttagcagtta cgttataacg caagtcatca
     2641 agatttttga ggtctgcctt cagaagaaat ggctgtcctt caaattgaaa tgataccggc
     2701 tgcaaggcaa cgtgcacgtc cctgggtgac ggagaggtgc atgttaccac tacttctgcc
     2761 tgaatttttt caacgggccg cggataatat tttgtttgaa tgctgccatt cttcagactg
     2821 acaaatgttt ttgtgaccgg aaataatttt ttatcaggat tgaatttgcc tttgcattgg
     2881 agatcgatat ttagattgcc gttaactgca agacttaaac tatcgagcgg gtaaaattgt
     2941 ttgatatcac cgaggtccaa attcgttttc aggtcaacat ccaggggcag gtcttcatct
     3001 ccgctgatct ttatatatcc ttttatgaaa ttgttcagcg cagttgcatt cacattttcg
     3061 atggagaaga ttgaatgatc cgggttgccg tcggggcatg aagcatttac gttaaaggtg
     3121 atgtcatgga tcgactgagg caatgatgcg tatttgaagt agccctggga gagtgatgcg
     3181 cttaacctga atcgtggaat ttcagaaagc aaggtatcgg gttgctttct taaaccgtgg
     3241 tagacaacag ttgttttgta acctccgtcg gcataaaaat gcaaattcgc ctttcccttc
     3301 agatcaacag cagaaattcc catggtcctg ttccattttt cgagatcaag attcgaattc
     3361 atcaccgcgt gcaagtgcgg atcatttaaa tttttcaact gaacaacacc gctgaaataa
     3421 tcctcgtcca tgttgaagaa aagcgaatcg atatttatat acaaactgtc agtattgagt
     3481 gaaggaagct ttgtgtcaaa atccaagaac aggttgctca ctggtgttgg tgcatcttga
     3541 tgagcgatat tcccgttccg cacggtcatc gtgaacccga gatcgggcat gatgttcttg
     3601 tcttcaatat attttccggt taagtacgcg tccaaatttg tgttgccgct tactgttgtg
     3661 ttttcaagcc aggaaagata ttccggcgga agcgcagtaa aagcatcgcg cagatttgta
     3721 ttgtgtgaaa aaatgcggaa atccatgttg tagccattct caagaaactc aaagttgcct
     3781 ttgaaatgta ccggtagctt gttgatgtgc agatcgttct tttcaaagac aaacgccagt
     3841 gagttagtgt tgatctttgt gatcaggtcg gcctgcaact gctttgcact tatataccgc
     3901 atgctgtcgt actccaaatc gaaggaatcg atttcaatgt ttgaagccag gtcgaagatc
     3961 gccttgctca gatcgccctt gcccgtataa ttcaactctt ttgccgcaat aacgatcggg
     4021 atcgacttat catcatacac gaggtttgta tgatcaattt ctataagctc gatcttcagt
     4081 tgtgtggtgc tggtgtcgtt ggaaactgca gtggaagtat cggtgcggta gacgttataa
     4141 ttcggctggc cgtttttgtc tactttgatt tgcacgtctc ctttagtaag aaatatttca
     4201 tcgatcctca tgcggctcga aaagagcgta gacagatcta cgcccaatgc tatttcatcg
     4261 gccttaagaa gggtatcgtt ttgaaacggc acggatcctt tcaaggaaac gtcatacagt
     4321 gtaagcgtca gagccgggaa atgattgaaa aaagacaaac gtgcctttga aaaattcagg
     4381 tctgttatga tgaccgcgtt ggcccatgtc ttgatcttag tcgcgacgaa atttggaaaa
     4441 agcaacggta aaaagaacat caacgctaca atactgacca gcgtgatacc acttatcttc
     4501 aaaaatttaa ttgcaattct ttttgcagag actttcatga attcctgaac aatggtcatc
     4561 caagttatct caaatttcag ttagctgcct gctttaacgg ttaagcgtag taggcgggaa
     4621 gtcatcaagt cggaaagtcg gaaagttgga aaagtcaggt agtcatggaa atccgaaagt
     4681 tgggaagtca ggaaagtgaa agctgcttca aggaaaaaat tagacattga aatattcaaa
     4741 tctgacagaa taggcatcaa aaaaataatg gtaagccagt tacctattga ttgcgctggt
     4801 aaacattttc atgccttgtc tgcaacgaaa tgctctgcat tctacggtta aaccggcaaa
     4861 tgcagcgttt ttaaatgcaa ctattagtta ccttgcatga gtgccgattt cataaattat
     4921 acacatcatg aaaaaattct ttttaccata tttggcagta gcgatgagtt tgttaagcgt
     4981 gcctgcgttt tctcaaactg agggcgattc aacagccatg ttaaacctgc cgggagataa
     5041 ccttgatctt tatgctgtac tggatctttt tcaaaagtca aaaaccattg aaggctttga
     5101 aaaatcgttg aatgatgaaa aagaaggtat caataacctg gacctaaacc tggataagaa
     5161 agttgatttt attaaggtgg taactcagaa gggggaagat tcgtcttata catttatact
     5221 ccaggttgat gtcaccaaaa ctgaaaagca ggatgttgcg gttatcctgt taaccaagca
     5281 gaatggcaga gtttctttac agatggttgg tgacgaagaa ttgtacggaa aggattatgt
     5341 tatagaacca aaaggaaatt cctccatcac agctaatccc gggtataaag gtgaagatcc
     5401 tgttgttgtg aatgttcctg catcaactgt aactgttgtt caatcggcac ccatcgtaca
     5461 gtatgtttat tcacctgcct acgtgcccta ctatcctccg tattattacg gatattatcc
     5521 tccgtggttt ggatttgcga cagttatggc agttggcata tatcgccata ataattggta
     5581 tcaccatggt ggttattatg gcggtcatta tcatggcggg aataataacg tgatcatcaa
     5641 taatggaaat cggaataaca ttaatcacta taacaacagt agaaacagat ccaatactgt
     5701 gtcaaataat atggcgaagg gaagttatgg caatagaccg tcaactagtg atagagcatc
     5761 aaccagtaat agagcatcaa ccagtaatcg ggcgacgact aataacaggc cctcaactaa
     5821 taataatgta agtaacaaca gagcatcaac cagtaatcga gcaacgacta ataccaggcc
     5881 ctcgaccaat aatagtgtaa gtaacaacag agcatcaagc agtagtctta ataggccatc
     5941 gacttcaaat ttttcttcgt cttctatggg gtcatcgcgt accagaagca gtggaagctc
     6001 aagctttagc ggcggcggaa tgagaagtgg cggcggcggc ggcaggaggc gataattgcg
     6061 tatcttttaa tgtactggca aaaaaaaagc ggccatgcag ccgcggacaa aatatattgt
     6121 ccctcttatt gaaggggcat atcagaagca ctcatttccc ttacggaaac atatttaccg
     6181 tctctttttt caaataggat catataattg ccggtattaa tgggattatt agcagaatcc
     6241 accactttat aataaccgac ttctaccacc tggtttccat catttgacgg aaaaacttca
     6301 ttggttttaa atgaaatctt attagtgttt ccggtcagat ctgatttcaa aaattcaacg
     6361 atcgccggct tgcccaccaa tggttccttg ttttgataaa agactgtcgc atcatcggca
     6421 taatagccta tgtttttcat ttctgcgtta ttataaagtg aggcaaattc atcttcctta
     6481 gcttgaattt ctttttttat ttggtctttg tcaactacga ctggtgcggc ctcttctttc
     6541 ttttcattac aggcgaacat taaagtgatt acaaatccag gtaataatac ttttagaatc
     6601 ttgctttcca taaaaaataa tttgttgctt ttaaaaaagg taagcccacc gcttaaaagt
     6661 aatataaaac atagagtttc ataacatttt ttcaaccggc acagacggaa ttgccggcga
     6721 taaaaagcaa ttgcgaatgg acggctctgc gcaaattttt gttttgatct atcggactca
     6781 ttcttttaat cattgtgtat tcgtacgcga agtttctgag ccatttttta cacgcatacg
     6841 tggttcatgc ttcgccgggc acatgataaa gataaagtta ggggctgatc ggttcggcat
     6901 ttatccgtta aatgagaatg aactttcagc gaagtgtttt acttctgcct gattaagtgg
     6961 atccattaaa acaaccacca ttccgccctg atgccaatgt actggcccca ctttttatgg
     7021 ccgatctccg cgaggtatgg tgaatataaa ttgtcggttg caaactgatt atattttgcg
     7081 atggaataaa ttacgcgcag atgcgggcgc gcccatggat ccgcctttgc ggttgggacg
     7141 aatgttggta ccagtgaaaa tttcgtcatt gccgctgaag gctgatcacc gtcttttcgg
     7201 ttcgcatagt gcagctctgt aattaagtga aaccattttt ttatgtacca gaaatttctg
     7261 acgccaaacg catattctgt ttttcgattg aagatctcgc ggccgaaata atcgggcgct
     7321 ttgttcaagc tatcagcagc gccgcggctt tttgtgtaga taccataacc gttcacggta
     7381 tatttcggac tcacgttcac aagaatgtga tcgacgagcg tggttgaata cgcgttgtca
     7441 aatttatttg tctgcaggtt cggagctcca tacgttagaa atgttttgga gttaccacca
     7501 tcgccaccat tcgcaatgcc gtgtccataa cggatcgcgg cctggttgaa cgaaccaccg
     7561 atcaccgtgt tcaggtttat agtgtgctca acgccgaaaa cccatcccgc tgctgcggga
     7621 taattatacg gtgtcgtggt atcttcaagt gttgcgtcgg caaggtgatg gtattcgccg
     7681 agcaatttta ttttctgctt gtcgtcatca aacggtatca cgtgttcgag aacaatcatg
     7741 cttcttccgc gcaacccgag gcgtggagtt tcgtcaatga tgtttacata aaagtttggc
     7801 ggaagtgagt tgccggtatc aacattgccc ggaaataaaa cagcgagcga ggttctgttg
     7861 tatgtgacgc caaaaccctg gctgctgtga tcgtcaaaat aaaaatagtc tgcgatgtgt
     7921 acatcgtaac cgcgaaagaa tttcgcgccc atccaggcac tccatttcga gccgcgaata
     7981 ttaagcgcct ctacatataa ttcaggcagg gcaacggtga ctcctccgta tgcgctggtg
     8041 ctgcttacat tcccgatcaa ctgtcctttg ccgctataca tggccagtcg cgcctgcata
     8101 ttgataaccg ttgtgtcgcc ttgcctgtct tccggtttga aatgaagagc agcaagcaac
     8161 tccacataat ctgcctcttc catcctgccg ccaatagagc ccatgccatt caggtttaga
     8221 gagcggccga tgttgccttc aatagccgga gaaaacccgg cacccacacg cccataggag
     8281 ccaaaggaaa atgctttatt agttgtggtt tgagataagg tttcctggac atggaattgg
     8341 aagagacccg taaggagaat gaaagtaaat tgctttttca tgcagccgat cggtaagcat
     8401 tttatttatt tcgacgaaaa gcaaactacc aatgatcttt tacagctatt cagccgattc
     8461 cttagccgtt gcttttgttt ttttaaattg aaaagagcca tccgcacgtg tgccgctaac
     8521 atcctggccc aatatttttc cggctctttt gatccttttt ctaaattttt tttcgcccag
     8581 caccggcatt agtgattcga gtgcaacttc aagttttttt tctatttctt ttcgggtttt
     8641 ctttttcgat ccgccttccg gtccctggtt cttttttgct tcctgcatat gtttattttt
     8701 tttgcgataa ttagcgggga taattccctt tataaaaacc aatagcttac ggccgccgta
     8761 agctaaggtt ttgtgcaata tgagtgaatg aaactgcttt gccttattgt ggttgcgtcg
     8821 gcgtggtatg cggttgttgg ccacccagct taaacgtaag acctccaccc aacgcaaatt
     8881 gcaacatggt agagtacgtc gaaacgccag cacctacacc acccgttcca aaatataaac
     8941 caccaccggc accctgcgga atagaaagaa gctgcatttg taattttata cccaccctgt
     9001 cagacgccca aacatttgta cccaaacgta aaccccaggc aaattttgtt gcactgttgt
     9061 cacccaactc ctgagatttt gcatcgatta tcgccatacc cagcatgaat cctccgtagg
     9121 gttctgcttt ggaaccggga gggcgcaatg atcttgcacc accgaccatg atataattta
     9181 tacccaggtc aatgtttgcg tgttgacctt gaattgtccc gtaataatcg ataggagcct
     9241 ttgtgtcgag cctttgatat aataattcga gaccatagta ttcatgtaac cggaattcaa
     9301 ggccaccgcc ccaaaggaat cctcctttta tttttccctg aaagtaccct gcctcactat
     9361 agctatagga attgtccact ttatcatcaa aaacataccc gccgtaaaga ttcaacctta
     9421 cattttgcga atgagcagca gaggccagcg atgtgaggaa aaccaggcta atgaaaattt
     9481 ttttcatatc aatgtttatt tttaagattt cgagaaattt agaactaaca cagttagatt
     9541 ttttccgcta tcaaattcaa tatgttacaa ggtattttta ttaaaatcaa aataaggtat
     9601 taatctcttg aataatggtg acagtatgca tttaacggtt aactcggcaa atccgtcata
     9661 ttttaaacag agttaacaaa tgtgcgcctg ttttgggtca tccgttgtaa ataaaatcat
     9721 gtaattcttt ttcaagttct ctgcggatat ttttatattc tttcattgag tgttcttttt
     9781 cactgaattc cttttctatt tctaccagtt gccgcatgca caaaacgtaa tccgcacaaa
     9841 gggcccggaa atcctcgtcg acttcgtata actgttcaat gcggtcgccc tgttcgggaa
     9901 atttttgttt aactgcacgt agttgcgcat tcaatgattc catttggttc ttcaaataag
     9961 gtgaaacaaa tacaatttcg atttcctata agcaccgcgc ttgatcctga actctataaa
    10021 attacttcgt gtgtctacct aagtgacatt ttgcgatcat tttacggtta acaggccatc
    10081 tgcttcagct atgcgataag agcggatgaa gaatttgaaa tcgttcgttt tttaaaaggc
    10141 caaatgacaa ccatcaaact ttcagaagat gctctttcca cgggcaacta aactgcagga
    10201 tgaaaaacga tccacagttg ttagcgcgtt caccttcaga gcgcacggtg cgaattacgc
    10261 gaggaccgtt ctttattgat tggttgatca tcctcttaag ggtggaaaga tgccatgatt
    10321 ttatgaccat ttgggtatca tggcatcttt atccttctgc atgattatga tgaaataaaa
    10381 gtaagaattg aactggccca atatggtgat ccacttcaca cttagaaatg attgttatca
    10441 tggaaacagc agccgtttta ttcgctgcga ccagaacgga actatccatt caaaagcaga
    10501 acgaagctgt tccttacccg caaatattca gcagcttttg taatttaacg gcggctatgc
    10561 acaaaaactt tttgataaaa tatgcgaggt tgaacctgcg cacagatttc gatagcctgc
    10621 aaattgaaac aagagaatta atacactcaa atgcatggtt gccgcatgtg aataaaaaac
    10681 actataccgg ggaatggcag gtgcttgcat tgcgttccgc gggcgggaat ttaaagcata
    10741 tagtagcgga ccagatgaac gaaactgctt ttattgacac ggcattaatg gaccagcttc
    10801 cgtcggtgaa aaaatttact gcgaacctgg aatgcccggt aatgtctgtg cggttgctca
    10861 atctcaagag cggcgccatt atcaaaccgc atcgcgactt tgatctgtgc tttgaaaaag
    10921 gagaagcgag aattcatctg ccgatattta caaatgaggc cgtcgaattt atacttgacg
    10981 aagaacggtt gttgatgaaa gagggtgaat gctggtatat aaatgcaaac ctcagccaca
    11041 gtgttgctaa ctatggcaga acagacaggt tacatctcgt gatcgattgt acggtaaatg
    11101 aatggctgaa aaacattttc aacgaggcgg aaaaagtaat gatcgaagaa aaaataaatg
    11161 tacatgagat tcaaaaagtg attcgtgagt tgcgattaca aaacacaacg atgtcaaaca
    11221 aattggccga tcaactggca gaaaaaatac ggtgataatt cctggagcag agcaacaaac
    11281 acgatggcga caaacctgga attgcgtaca gattcacgtt agcgtgctca cagctgagtt
    11341 aggtacagag gtgacccgga atgacaacgg ccaacactta aaatattttc ctgatgattt
    11401 tgagcgaaga ttcatttaag aactggatac catataaact gcttcgcgac aacgatgatc
    11461 tcaagtgtga atggctttac gttggagacg aaccattcct cgagccattt tttgattcta
    11521 caattgcccg ctgtaagcag ttgcctgaaa actttgacca ttataaaaat gttaccgctc
    11581 tctccaccat gcttgaatgg tcggcaaagg ttgatgcagc cgagccagcg ggttttatct
    11641 ttcatgtttc gcggtgcggg tctaccatgg tctctcaatt attgtcaatg cacacggaac
    11701 atattgtctt atctgaagtt ccgttttttg atgacatcct gcgaatgccg caaatagaaa
    11761 agtatacgaa tgctgagcta tttaaaggcg cggtgaaatt gtacagccaa aaaaagacag
    11821 gctccgagaa aaaagttttc atcaaaacag atagctggca tatacgcttt cacaaagaga
    11881 tcagggaaat gtttccggag atcgtctttt tgttgttgta ccgaaggcct gacgaggtag
    11941 taagatcgct gaacagggct gctggcatgc actgcgttcc gcaatttatc gatccccaat
    12001 tttttggcat tccggataaa gtggttacca taacggattt ttacgattac ccggtgaaag
    12061 tgatcggaaa atatctcgaa acttacctgg aggttgccgc tactgatccc aatttgctgc
    12121 tcttaaatta taacgaaggc atgcttccca tcattgaaaa gatcggcaac cgcgttggga
    12181 taatattcag cgtcgatgaa caagctaaaa tgaaagagcg gcttcttttc cagggcaaac
    12241 aaccgcagct ttatttctcg cctgaacctg ctattgatac tatttccgat aagttctctg
    12301 gtttgtttga gctctatgac cg
//
LOCUS       DASQJI010000100         6658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1543540,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000100 DASQJI010000000
VERSION     DASQJI010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6658
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1543540"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..935)
                     /gene="hisG"
                     /locus_tag="VEV83_03150"
     CDS             complement(81..935)
                     /gene="hisG"
                     /locus_tag="VEV83_03150"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HYK44137.1"
                     /translation="MKLKIAVQKSGRLYDDSLKILKECGIELPAALNKLLNEAINFPL
                     QILFLRDDDIPQYVEDGVADIGIVGENVIFEKGRNIQLLDKLGFGKCRLSIAIPRNES
                     YTGVDFLHQKRIATSYPFLLQQFLDEQKVEAEIHEISGAVEITTSVGLADAICDLVSS
                     GSTLFSNGLKEAEVVLNSEAALISNKDLDDEKQLLVKKLLFRIQAVKKSRKYKYILLN
                     VPNDKIETICSIIPGMKSPSIIPLTTEGWSSLHSVVHEDDFWNIIESLKEHGAQGILV
                     APIEKMIV"
     gene            1155..2231
                     /gene="pheS"
                     /locus_tag="VEV83_03155"
     CDS             1155..2231
                     /gene="pheS"
                     /locus_tag="VEV83_03155"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HYK44138.1"
                     /translation="MQTFPFLIFAIMQDLLQQIEAYKKEIENFVSENGDSAESFRIKF
                     LGTKGIVKNLMQEMKQVPNEKKKEVGQILNNFKQAAEARYESLKHEASTLKPAGEQTS
                     VNIDYTLPGDRIAFGTRHPLSIVRNRIISIFNRLGFVLAEGPEIEDDWHNFTSMNILE
                     NHPARDMQDTFYIRQNPDWLLRTHTSNVQARVMEKQKPPIRIICPGRVYRNETISARA
                     HCFFHQVEGLYVDDNVSFADLKQTLYFFVQEMFGKEVKIRFRPSYFPFTEPSAEMDID
                     CQLCHGAGCAVCKHTGWVEILGSGMVHPKVLANFDIDPEKYTGFAFGMGIERICQLKY
                     RVNDLRLYSQNDVRFLKQFQGVVF"
     gene            2436..2861
                     /locus_tag="VEV83_03160"
     CDS             2436..2861
                     /locus_tag="VEV83_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK44139.1"
                     /translation="MKNFIACCFLIAVTISSFGQTPDETAIRNVMDVQVKAWNLGDID
                     TFMQTYWQSDSVLFVGSSGPTYGWKNTLDHYKKAYPDTTAMGTLSFNLLQLKPLSSDY
                     YFVLGQWHLKRTIGDIGGYFTLIFKKINGHWVIVADHSS"
     gene            3161..>6658
                     /locus_tag="VEV83_03165"
     CDS             3161..>6658
                     /locus_tag="VEV83_03165"
                     /inference="COORDINATES: protein motif:HMM:NF042648.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N-dimethylformamidase beta subunit family
                     domain-containing protein"
                     /protein_id="HYK44140.1"
                     /translation="MKKASLPKRATYALSCLTLLIILSVFVVFNAAAQNAIATENALP
                     GNPASEWDVDGAGDLSIQGFATDISVNKGETVHFKIKTDASAYTIKIYRLGYYNGDGA
                     RKIGSAKITATLPQSQPNPLTDASTGLVDCGNWSESARWNVPANAVSGVYIAKLTRTD
                     TKGSSHIVFIVRDDTAHSNLFFQTSDATWQAYNAYGGNSLYVGNTSFPNGHAAKVSYN
                     RPFITRNGGGGGGASEDWLFNAEYPMIRWLEHNGYDVTYTTSIDAARHGNLILNHKVY
                     MSVGHDEYWSGEQRANVEAARNAGVHLAFFSGNEIYWKTRFESSIDGTNTSYRTLVCY
                     KEGTLGENVCGGKCDPLSNVWTGLWRDGCNFPQADGCRPENALSGQISWDGTESAIQV
                     PGKYKNLRFWRNTGIATLDSSQTKTLTAGSLGYEWDWSQYKTSYPQGRVLMSSTIING
                     HTHNLSIYRHSSGALVFGAGTVQWSWGLDTKHDRSGSSTDKNIKQATVNLFADMGVQP
                     TTLETGLVLATASNDNNPPASVITYPAQGATITGSPVTITGTSSDVGGGVSVAVEISV
                     DGGATWQSATGTSNWTYTWTPSTGGSITIKSRAVDDLGNLENPGSAPASNAVTVNVSP
                     TQSQCPCTIFQNTDAPFAAPVNDNTGAGIELGVKFKTTSNGYITGLRYYKGAGTTGTH
                     TGHLWTSTGSLLAQATFSNETSSGWQQVTLDNPVAVSAGTIYVASYYSSSGDYAYTDQ
                     YFTQEKVAGPLTAIADSDPNGPNGVFIYTNTPTFPVNAYQASNYWADVVFKDSAGPDT
                     KRPTVVSVSPLDNTQGNSITTKVSAIFSEAIDPSTVSSTTFKLKSAKAIAATVSYDAS
                     KHKAILTPSAPLNYSTTYTATIKGGSTGIKDLAGNPLAADYVWTFTTSAPPPPTFTDG
                     PGGPVLLITSTSNPFSRFPAEILRAEGLNEFKVLDLADVNSKVLDKYDVVVVGNISLT
                     ATKVTLLTNWTNAGGTLIALKPDSKLASLLGLSATSSTLANKYLLVNTSSGAGAGIVN
                     QTIQFHGTSDLYTLNGATALATLYSDATTPTVYPAVTTRDVGSNGGRAIAFTYDLARS
                     IVYTRQGNPLWAGQKRDGQIDPIRSDDLFFPDWIDFNKVAIPQADEQQHLFANIILQS
                     NLHKKPLPRFWFLPRGLKAA"
BASE COUNT         1809 a         1589 c         1534 g         1726 t
ORIGIN      
        1 tcttacggct ctataatcgt gcagaggacg tttcagtaac tgctcataat cttttttgga
       61 tggaaatttg atcacctgca tcatacgatc atcttttcta tcggtgcaac caaaataccc
      121 tgtgctccat gttcctttag cgattcgata atattccaga aatcgtcttc gtgcacaacc
      181 gaatgaagtg agctccatcc ctccgtggtg agcgggatga tcgacgggct tttcatgccg
      241 ggaatgatcg aacaaatcgt ttcgatctta tcattcggaa cattcaacaa aatgtatttg
      301 tactttctcg atttctttac tgcctgtatc ctgaataaaa gtttttttac caaaagctgc
      361 ttttcatcgt caagatcttt gttactgatc aatgcagctt ctgaattcaa aaccacctca
      421 gcttccttca acccatttga aaataatgtg ctgcctgaac tcaccaggtc gcagatcgca
      481 tcagcaaggc cgacactggt ggttatctca actgctccgc tgatctcatg aatttctgct
      541 tctacttttt gttcatccaa aaattgctgc aacaagaaag gatagctggt ggcgatcctt
      601 ttttgatgca ggaaatcaac acctgtgtaa gattcattac gcgggatcgc aatagaaagc
      661 cggcatttgc cgaaaccgag tttatcgagc aactgtatgt tcctgccctt ttcaaaaatt
      721 acgttttcac caacgatgcc aatatcggca acaccgtctt ctacgtattg cggaatatca
      781 tcatcgcgca gaaacaagat ctgcagagga aaattgatcg cctcgttcag caatttattt
      841 aaagcggccg gaagctcaat gccgcactcc tttaatattt ttagagagtc gtcgtacagc
      901 ctgcctgact tttgaaccgc gatttttaat ttcatgttca tttaagtaat taaaataaaa
      961 aaggctcact gttgtagtaa gccttttatg tttgaaattt ttataattac atacaatcac
     1021 agcttacctg tcaaggtaaa tgatgatgat gtgtatgtgc tttgcgaatc attatacgag
     1081 ccgcgaatgt aaggatcaaa ttgtacaact caaaaatttt tctgttcttc tcctgcagcg
     1141 aacgttcaaa acacatgcaa acattccctt ttcttatctt cgctattatg caggatttgt
     1201 tgcaacaaat agaggcgtat aaaaaggaaa ttgaaaactt cgtttcagaa aacggtgact
     1261 ctgcggaatc attccgcatc aagtttcttg gtacaaaagg tatcgtaaag aatttgatgc
     1321 aggaaatgaa acaggtgccc aacgaaaaga agaaagaggt tgggcagata cttaacaatt
     1381 tcaagcaagc cgccgaggcc aggtacgagt cattaaagca cgaagcctca actctgaaac
     1441 ccgccggtga acaaacctcg gtcaatattg attatacact tcccggtgac cgcattgcat
     1501 tcggaacgcg tcatccgttg agcatcgtgc ggaacaggat catttccatt ttcaacaggc
     1561 ttggatttgt gctggccgag ggaccagaga tcgaagacga ttggcacaac tttacgtcga
     1621 tgaacatcct ggaaaatcac ccggcgaggg atatgcagga tacattctac atcaggcaaa
     1681 accctgactg gcttttgcgc acgcatacga gcaacgtgca ggctcgcgtg atggaaaaac
     1741 aaaagccgcc gatccgcatc atttgccccg ggcgcgttta ccgaaacgaa accatcagcg
     1801 cgagagcgca ttgctttttt caccaggtgg aaggattata cgtggacgac aacgtgagct
     1861 ttgccgatct caaacagacg ctgtattttt ttgtgcagga gatgtttggc aaagaagtta
     1921 agatacgttt ccgcccctct tactttccgt tcaccgagcc aagcgcagag atggatatag
     1981 attgccaact ttgtcatggc gccggttgtg ccgtttgtaa gcataccgga tgggttgaaa
     2041 ttctcgggag tggtatggtc caccccaaag tgctcgcgaa ttttgatatt gacccggaaa
     2101 aatatacggg ttttgctttt ggaatgggca tcgaacgaat ttgccagctc aaatatcgcg
     2161 tcaatgatct tcggttatat tcgcaaaacg atgtgcgctt tttgaaacag ttccagggag
     2221 tggtattttg attttttccg tctttttagt ttcacgttta ttaatatttt gacgtgatgt
     2281 gctcttgatt ttttagagtc agccattttg ttagtgtgcc tttcggcctc ctggtagttc
     2341 aaaaattctg aaaccaccaa ggcaccacgg cacgaggttt cacaaagttg aacactcatg
     2401 gaatttttaa tttgtcacca gttgaacttc cacacatgaa gaacttcatt gcttgttgtt
     2461 ttttgattgc cgttacaatt tcatcgtttg ggcaaacgcc ggatgaaact gcgatccgca
     2521 acgttatgga tgtgcaggta aaagcctgga atttgggcga catcgatacc ttcatgcaaa
     2581 cctattggca aagcgacagc gttttgtttg tcggcagttc agggccgact tacggatgga
     2641 aaaacacact cgatcattat aaaaaggctt atcctgacac taccgcgatg ggcacgctct
     2701 cattcaatct gctccagtta aagccgctct catcagatta ttattttgtg ttgggacaat
     2761 ggcatctaaa acgcacgata ggtgatatcg gcggttactt cactttaatt tttaagaaaa
     2821 taaacggtca ttgggtgatc gttgcggatc acagcagtta gttccttttc caggtacaga
     2881 aaaaattttg cgcccttcgc gttcactgat ttctcctggc cgaccgggca gccgaaaact
     2941 gctggctgcc aaaggattac gagcggccac gttcaaaaaa attttttttg ttttgtttgt
     3001 tattcgaaaa aaacctttca cttttgcgct ttaatccctt tactcattcg cccaaatccg
     3061 aacgtgaaaa ctgaataact tttagttcga attttcaact tggctgattt ttcaagcgaa
     3121 tatttcggga taggaacatt tagttaacct agtgctatct atgaaaaaag catcattacc
     3181 caaacgggca acgtatgccc tgtcatgcct cacattgctc atcattttaa gtgtatttgt
     3241 cgtgtttaac gcggccgcgc aaaatgcgat cgcaactgaa aacgccttgc caggtaatcc
     3301 ggcttccgaa tgggacgtcg atggtgccgg agatctttcc atccagggtt ttgctaccga
     3361 catcagtgta aataaaggcg agaccgtcca tttcaaaatc aaaaccgatg cgagcgcgta
     3421 cacaataaag atctaccggc tcggctatta caacggggac ggcgcgcgta agatcggttc
     3481 agcgaagatt acagcaacat tacctcaatc ccaaccaaat cccttaaccg acgcgtcaac
     3541 gggcctcgta gactgcggca attggagcga gtcggctcgc tggaacgtac ccgcgaatgc
     3601 tgtatcaggc gtttatattg cgaaacttac ccgaacagat actaaagggt caagtcacat
     3661 tgtatttatt gtgcgtgatg acaccgctca ttccaacctg tttttccaaa cgtcggatgc
     3721 cacgtggcaa gcgtataatg cctacggcgg caatagtctt tacgtaggaa acacatcttt
     3781 tccaaacgga catgctgcaa aggtgagtta caatcggccg ttcattacgc gcaacggcgg
     3841 tggcggtggt ggagcatcag aggactggtt gttcaatgcg gaatacccga tgatcaggtg
     3901 gcttgagcat aacggctacg atgtgactta cacaacaagc atcgacgcag cgcgacatgg
     3961 caacctcata ttaaatcata aagtttacat gtccgtcggg cacgatgaat attggtccgg
     4021 cgaacagcgt gcgaatgtag aagccgcgcg aaatgccggc gttcacctcg catttttcag
     4081 cgggaatgaa atttactgga aaacccggtt tgaatccagc attgatggta cgaatacttc
     4141 gtaccgtacc cttgtgtgtt acaaagaagg aacgttgggt gaaaatgtat gcggtggaaa
     4201 atgcgatccc ttatccaacg tgtggaccgg actttggcgg gatggttgca actttccgca
     4261 ggctgacgga tgtcgtccgg aaaatgcact gtctggccaa attagctggg atggcacaga
     4321 gagcgcgatc caggtaccgg gcaaatacaa aaatctgcgg ttttggcgaa atacaggcat
     4381 tgcaacactc gacagtagtc agacaaaaac gcttactgcc ggcagccttg gatatgaatg
     4441 ggactggagc caatataaaa ccagctatcc gcaaggcaga gtgttgatgt cttccacgat
     4501 tatcaatgga cacacgcata atttgtccat atatcggcat tccagcggtg ccctcgtttt
     4561 tggcgctggt accgtccaat ggtcatgggg cctcgataca aagcatgatc gctccggctc
     4621 ttcaaccgat aaaaatatta aacaggctac ggtcaactta tttgcagata tgggtgtgca
     4681 gccaactacc ctcgaaacgg ggcttgtgtt ggcaactgca tctaatgata acaatccgcc
     4741 ggcttccgtc ataacgtatc cggcacaggg tgccactata accggttcgc cggtgacgat
     4801 aaccggaaca tcttcagatg tcggtggagg agtttcggtt gccgttgaga tctccgtaga
     4861 cggcggcgca acctggcaaa gtgcaacggg gacatcaaat tggacttaca cgtggacacc
     4921 gtcaaccgga ggaagtataa ccattaagag cagagccgtg gatgacctcg gaaatttgga
     4981 aaatccgggc tcagcgccgg cgtcaaatgc cgttacggta aacgtatcac caacgcaaag
     5041 ccagtgcccc tgtaccatct tccaaaatac cgacgctcca ttcgctgcgc ctgtgaacga
     5101 taacacgggc gccggaatcg agcttggcgt gaaattcaaa acaacgtcga atggttatat
     5161 aaccggccta cgctattata agggtgcagg cacaaccgga acacacacag gtcatttatg
     5221 gacttccacc ggcagccttc tggcacaagc aacgttctcg aacgagacat catcgggatg
     5281 gcagcaagtg acgttggata acccggtggc cgtatccgct ggaactatct atgtggcatc
     5341 ttactacagc agttcaggcg actacgcata cacggatcag tatttcaccc aggaaaaagt
     5401 ggccggtcca ctgactgcaa ttgctgattc ggatccaaat gggccaaacg gagtctttat
     5461 ttataccaac actcctactt ttccggttaa cgcttaccag gcaagtaact actgggccga
     5521 cgttgtcttt aaagacagtg cgggccctga cacgaagcgt ccaaccgttg tgtcagtatc
     5581 gcctctggac aatacgcagg gcaatagtat aacaacgaaa gtttcagcga ttttcagtga
     5641 agcgatcgac ccgtcgacag taagttctac aactttcaaa ctaaaatcag ccaaggctat
     5701 agcagctacg gtttcttacg atgcgagcaa acacaaggcg attctcacgc catctgcgcc
     5761 actgaactat tcaactactt acacggcaac gatcaagggc ggcagcactg gcataaaaga
     5821 ccttgcaggg aatccgctgg ccgccgatta tgtttggaca ttcacgacgt cagcaccgcc
     5881 accgccaact tttaccgatg gtcctggcgg cccggtattg ttgatcacga gtacgtctaa
     5941 tccgttcagt cgttttccgg ccgaaatctt aagggcagag ggtttaaacg aattcaaggt
     6001 gctcgacctt gctgatgtca acagcaaagt attagacaaa tacgatgttg ttgttgtcgg
     6061 caatatttcc cttacggcga cgaaggtgac cttactcaca aactggacga atgctggcgg
     6121 aacactgatc gcgttgaagc cagacagcaa actggcatcc ctcctgggct tgtcagcgac
     6181 ttcatcaacg ctcgctaaca aatatctcct ggtgaatacg tcatccggcg ccggtgcagg
     6241 gatagtgaac caaacgattc aattccacgg cacatcggat ctgtacacgt tgaacggtgc
     6301 tactgctttg gcgacattgt attcagacgc aaccacgccg actgtttacc cggcagtaac
     6361 aacgcgtgac gttggttcaa acggcggaag ggcgattgca tttacctatg acctggcacg
     6421 atcaatcgtt tacacaaggc aaggaaatcc tttatgggcc ggacaaaagc gcgatggcca
     6481 gattgatccc atcaggtcag acgacttgtt cttccccgat tggatcgatt tcaataaagt
     6541 ggcgatacca caagccgatg agcagcagca tttgttcgcc aatatcattc tccaaagcaa
     6601 tctgcacaaa aaaccgttac cacgattttg gtttcttcca aggggcctga aagctgcg
//
LOCUS       DASQJI010000101        11222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_622138,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000101 DASQJI010000000
VERSION     DASQJI010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11222
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622138"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VEV83_03170"
     CDS             complement(<1..1082)
                     /locus_tag="VEV83_03170"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HYK44141.1"
                     /translation="MYRETEILKDAASEPDNLDGSGDLVINVGPQHPSTHGVLHLVIT
                     LNGETIKNVEPHLGYIHRSIEKMCESLSYRQFIYVTSRMDYLSSHINNHGCALCVEKG
                     LQVEVPPRAKVIRVLMDELTRLASHQLWWGAMAMDVGALTPFFHAFREREMINDIMEE
                     TCGARLTMNYMVPGGVMFDLHPNFQRHVKEFIEEFKKKIDEYDELVTGNVIFQNRMKG
                     IGYLTKEDAISYGCTGPTARASGVSCDIRKLYPYEVYDQVQFNEVIQTGGDCFARYLV
                     RMEEIRQSLSIVEQLIDNIPEGDFQAKTKAVLKLPKGEFYSRIETARGEFGVYIVSEG
                     GTTPYRIKFRSPGFSNLSALNHMAKG"
     gene            complement(1104..1559)
                     /locus_tag="VEV83_03175"
     CDS             complement(1104..1559)
                     /locus_tag="VEV83_03175"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HYK44142.1"
                     /translation="MNNEELKLKITELIPSAVVEQGGEWVTAFVDAKSWKDIASQLRS
                     DEALSFDYLFCLTCVDWKTHFTMVYHLTSTNHRHTLVLKSKLDRNNPEIETVSELWRT
                     AEFHEREVYDLFGVKFLNHPDLRRLLLTDDWEGWPLRKDYEDPVNMIKL"
     gene            complement(1588..2166)
                     /locus_tag="VEV83_03180"
     CDS             complement(1588..2166)
                     /locus_tag="VEV83_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HYK44143.1"
                     /translation="MNESQNINGEGKISSASAPDKEQVVFPGAVHPTAGGGIVLSKLD
                     EVINWARSNSLWPLVFGTSCCAIEMMSTASAKYDWSRFGFEVARATPRQADLIIIAGT
                     IVNKMAPVLKRLYDQMADPKYVIAMGACATSGGPFFYNTYSVVKGADHVIPVDVYIAG
                     CPPRPEALLHAMITLQEKIKSGATREQIRNSI"
     gene            complement(2213..2563)
                     /locus_tag="VEV83_03185"
     CDS             complement(2213..2563)
                     /locus_tag="VEV83_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HYK44144.1"
                     /translation="MGPSSLLVLTCAAIAFSAGGIAVAKFLVKGTKNPAKGQPYECGV
                     PSHGSPWNQFNIGYYLFALIFLIFDVELIFLYPWAVVVKEIGVPAFIEIIVFLFILFM
                     GFLYAHKKGALKWM"
     gene            2828..3181
                     /locus_tag="VEV83_03190"
     CDS             2828..3181
                     /locus_tag="VEV83_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HYK44145.1"
                     /translation="MSTVKFVVELTVPDNRLERFKRVAKEMNQIVKNDEPDTLSCKWF
                     YIAGENKWCLTQKFKDSDAFLKHLHQVSEEMNEILEISKVERFEVFGGLSYAARAAIA
                     SFGVKHYTYWTGVVH"
     gene            3216..4292
                     /locus_tag="VEV83_03195"
     CDS             3216..4292
                     /locus_tag="VEV83_03195"
                     /inference="COORDINATES: protein motif:HMM:NF023166.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HYK44146.1"
                     /translation="MKKIITTIFLFASLYAAGQESSSWYKMLTGNIDKYAITMHLHKQ
                     GHSYSGYYYYNSRQSPVYVMGEDTSEKGKIKLAAYADPNEPEYFTFSFSGNAASGTWR
                     KDKTLSLSLTEAHMPVAFTNVYTEGAVKLRPAVEDSPDATFEAASVWPPGNTTTDEFI
                     KSEIRKLFFQKDEGGEIGALLLKMKKKFFADYLEENKDVTNAELKDSYTAYSMDVSDK
                     LMIMFQTSNLVTLAFDNYAYTGGAHGNYGTEFKVLDLTKNRSLTLPDILTESGIAKLQ
                     PKLEASFRKQFNLQPGDSLTDAGLFENKIEANDNICVTGSGLQFVYNPYEIGPYAMGE
                     IELFIPFTELTEYLKPGFKNLLNQ"
     gene            complement(4334..4633)
                     /locus_tag="VEV83_03200"
     CDS             complement(4334..4633)
                     /locus_tag="VEV83_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYK44147.1"
                     /translation="MKKVFLYKLIPPRPTFGMDMTHDERNIMLQHIQYWKEQIDKGIA
                     VAFGPVLDPSGVYGVGIIQVDDEAETRPLAENDPAILSGLHTFEIYPMPNAIVKQ"
     gene            complement(4648..6495)
                     /locus_tag="VEV83_03205"
     CDS             complement(4648..6495)
                     /locus_tag="VEV83_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HYK44148.1"
                     /translation="MNRQDVLLNDVVIKFAGDSGDGMQLTGTQFTNNTALLGIDVATF
                     PDFPAEIRAPQGTLPGVSGFQLHFSSSRIFTPGDLCDVLVAMNAAALKSNLNSLKRGG
                     KIIANIDGFDAKNLRLANYTDGINPLDDGSLDGYEVIKIDVTKLTRESLKDFPELGMK
                     EKDRAKNMFVLGFLYWMYNRTLDNTINFLKEKFGKKETIFNSNIKVLQAGYNFGDTTE
                     TFTTRYKVDKAKLPSGVYRGIMGNQALAYGLIAASQKSGLPLFLGSYPITPASDILHE
                     LSRYKAFGVKTFQAEDEIAAITSAIGASYGGSLGVTTTSGPGMALKAEAMGLAVVLEI
                     PLLIIDIQRGGPSTGLPTKTEQSDLLQAYYGRNGECPMPVVAARTPSDCFDAVFEAVR
                     ISVQHMTPVIFLSDGYIANGAEPWRFPKPDELPAIEVKFKQGLDPDEEKFMPYKRDEK
                     LVRPWAIPGTAELEHRIGGLEKENITGNVSYDPENHQLMVNIREQKVENIADYIPLQA
                     LDSGPSTGKLLVLGWGSTYGAIKSAVGQLQSEGHAVSHAHLRYLRPFPKNLAQILKSF
                     QTVLVPEINNGQLVKIIRDKFFVDAKGYNKVMGIPITKTELLQEIKNYL"
     gene            6820..10485
                     /locus_tag="VEV83_03210"
     CDS             6820..10485
                     /locus_tag="VEV83_03210"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HYK44149.1"
                     /translation="MVTIPMPEKTGTKKLFETSYIIGIGASAGGLDAINEMFENMPDN
                     TGFSFVIIQHISPDYKSLMAELVAKHTAMKVVEAAHEMLVLPNHIYVIPSKKVMTLKF
                     GKLLLHEKERTKSPNNAIDVFFESLAEDAGEYAVGVILSGTGTDGTRGLEAIKSKGGF
                     IAVQEPITAAFDGMPNSAIATGKADMIVSPERMGEELLEFLNEPPEIKAFHARSQKDE
                     LFLRDLLLLIKDRTGHDFSYYKRPTICRRLAKRLSEVGVSDIHTYLAHVETHPEELSV
                     ISKDFLINVSGFFRDKEAFDIVATRVVPAIVKNKTDDDTIKAWCVACSTGEEAYSLAI
                     LFKEALERSNRKNLIVKIFATDIDREALETASRGFYSKTISQDIPANRLARYFLPEEN
                     GYRIHPDIRKMVVFSYHDILKDPPFGRMDMVSCRNMLIYINPQQQKEIQRKLHFALNL
                     GGFLFLGSSENIGIMNLVTEEIDRKWKIYKCTAKTRLEEYNAMLVPLEKRMIAHTQPR
                     QKNPLNHIAELFNETLLEDHHFSGIFINTDFEVKQAIGSYKKFINFPESSFNLNLLKM
                     VDPDLSIVLSVAINKAMRDNQPVITRGVKLGNKENVRSINVIVKPYLQMPDYQHSFLF
                     IALEEEDKPEAGKSAPASETFTTAQRVVELEQELQETRSNLQALLEEVETSNEELRSA
                     NEEAISTNEELQSTNEELQSLNEELHTVSAEHQLKIKELMELNDDLNNYFRNSDLGQI
                     LVDKHLIIRKFTPSVKPMINLIETDINRSLLDITTRIRNRDLIQDIRDVIKTGRTFEK
                     EIILNDNTVYLMRINPYLKQDQSIDGAVINFIDISELTKLNSIVQAIFESSENAITAK
                     KAIRNEHDEVIDFEYIAANKACEKLYGFPVATIIGKRMRTFDELRKDHFALFRKVVET
                     GESIQYEYYDDRLAKWLNMSVAKMMDGIVAIATDVTASKKAADLIAQHYEDLKVTSGK
                     LEASNIQLEQSNLDLMQFASVASHDLKEPLRKIETFGNLLQAKLKDRFDDGEMKYLDK
                     IIKSSHRMQSLIEDVLTFSKLSNNELPLEKIDLNKIVNRIREDLEITIKEKNANIQLQ
                     PLPTVDAVKGQMHQLFQNLISNALKFNDKKEPHVMVSERNIPQYQAESLKINPEHYVC
                     ISVKDDGIGFEEKFREKIFGIFQRLHGNQFEGTGIGLAICKKIIENHNGFLLAESALD
                     QGTEFFVILPRNANGRG"
     gene            complement(10620..>11222)
                     /locus_tag="VEV83_03215"
     CDS             complement(10620..>11222)
                     /locus_tag="VEV83_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter TolR"
                     /protein_id="HYK44150.1"
                     /translation="IVYTVPITGGEPKQITPTGPSYLHGWSPDGKYLAFVGQRNDEFD
                     IYRIASDGSGTETKLTNTKGLDDGPEYSPDGKYIYFNSVRSGTMQIWRMHPDGSKPEQ
                     LTNDEFNNWFPHISPDGKWIVFVSFGQDVKPSDHPFYKHVYIRLMPADGGKPKVIATL
                     YGGQGTMNTPSWSPNGKYIAFISNSNFLSPIYLTEEKEKQ"
BASE COUNT         3205 a         2616 c         2497 g         2904 t
ORIGIN      
        1 tatccctttg ccatatgatt cagcgcagac aaattggaaa aaccgggcga ccgaaacttg
       61 atccggtatg gcgtagtgcc gccttcgctc acgatgtaaa ctccaaattc gccgcgcgct
      121 gtttctatcc tcgaataaaa ttctcccttt ggtaatttca atacagcttt cgtctttgcc
      181 tggaaatctc cttcgggaat gttatcgatc aattgttcaa ctatcgaaag cgattgacga
      241 atttcctcca tgcgaacgag atatcgcgcg aaacaatcac cgcccgtttg gatcacttca
      301 ttaaactgaa cctgatcgta tacttcataa gggtacagtt tcctgatatc gcaacttaca
      361 ccactcgccc tggcagttgg gcctgtgcag ccgtaagaga tcgcgtcttc ttttgtgaga
      421 tagccaattc ctttcatgcg attttgaaag atcacattcc ctgtaacaag ttcatcatac
      481 tcatcgatct tcttcttaaa ttcttcaatg aactctttca catgtctttg aaaattcgga
      541 tgcaggtcaa acattacacc gccgggcacc atataattca tcgtcaaccg tgcgccgcac
      601 gtttcttcca taatgtcgtt gatcatttct ctttcgcgaa atgcatgaaa gaatggagtc
      661 agcgctccaa cgtccattgc catcgctccc caccacagtt gatgcgatgc aagccgggtt
      721 aattcatcca tcaaaacgcg gatcactttt gcgcgtggcg gcacttcaac ctgcaagcct
      781 ttttccacgc ataaagcgca gccatggtta ttgatatgcg aggagagata atccatacgg
      841 ctcgtcacat aaatgaattg ccggtacgat aaactctcac acattttttc aatagaacga
      901 tgaatatacc cgagatgtgg ctcgacgttt tttatcgttt cgccgtttaa tgtgatcacg
      961 agatgcagga cgccatgcgt agatgggtgt tgcggaccaa cattgatcac gaggtcaccg
     1021 ctgccgtcta aattatcggg ctcagaggct gcgtctttca atatttccgt ttcgcgatac
     1081 atttactaat accaacaacg tttttataat ttgatcatat taacagggtc ttcataatct
     1141 tttctcaatg gccagccttc ccaatcatct gtcagcagta atcgacgcag gtccggatga
     1201 tttagaaatt tcacaccaaa aaggtcatag acctcgcgtt catgaaattc ggccgtacgc
     1261 cagagctctg ataccgtttc tatttcagga ttatttctgt cgagctttga tttaagaacc
     1321 aatgtatgcc ggtggttggt tgatgttaaa tgatacacca tcgtgaagtg ggttttccaa
     1381 tcgacacaag tgaggcaaaa cagataatcg aagcttagcg cttcatcgga tcgaagttgc
     1441 gaagcaatat ctttccagct ctttgcatcg acgaaagcgg ttacccactc acctccttgc
     1501 tcaacaaccg ctgaaggaat taattccgtt atttttaatt tcagttcttc gttattcata
     1561 caaatcctaa ttcctaattc ctaaatccta aatcgaattc cttatctgtt ctctcgttgc
     1621 gccgctctta attttttcct gtaatgtgat cattgcatgt aacaatgcct ccgggcgtgg
     1681 aggacatccg gcgatataaa cgtccaccgg tataacatga tccgcacctt ttacgacaga
     1741 ataagtattg tagaaaaaag gaccgccgct cgttgcgcac gcgcccatag cgattacata
     1801 ttttggatcg gccatttggt catatagccg tttgagcacc ggcgccattt tattgacgat
     1861 cgtgccggcg ataatgataa ggtcagcctg ccgtggcgtc gctcttgcaa cttcgaatcc
     1921 aaacctcgac caatcatact tggccgatgc cgtgctcatc atttcaatcg cgcagcaact
     1981 tgtgccaaac accaaaggcc acaatgaatt cgaacgcgcc caattgatca cttcgtcgag
     2041 cttgctaagc acgataccgc cgccagccgt tggatgcact gcgcccggga aaacaacctg
     2101 ctctttgtcc ggcgcgcttg ctgaagatat cttgccctcg ccgtttatgt tttgtgattc
     2161 attcattttt ctgtattggc cccccttaca tgaagaaagg acgtgggcga tgtcacatcc
     2221 atttcagcgc tccctttttg tgtgcatata aaaatcccat gaaaagaata aacaggaaga
     2281 ctatgatctc gatgaatgcg ggtacaccga tttcttttac cacaacggcc cagggatata
     2341 aaaagatcaa ctcgacatcg aaaatgagaa agatcaacgc aaacaagtaa tagccaatgt
     2401 tgaactggtt ccatggcgat ccatgggaag gcacgccgca ctcatatggc tgcccctttg
     2461 ccgggttctt tgttcccttc acaagaaact ttgcaactgc aattcctcct gctgaaaagg
     2521 caatcgctgc acacgttaga acgagcaatg aagatgggcc cattaattaa ttattatcat
     2581 ccacaattta gcatgtaaaa tcatacccgg gctgcaattt ttctttaaat gttgttgtga
     2641 taatcgcaaa cgagcgggtg aaaatatcga aaaacaatat gggaaatact gataaatatc
     2701 atttgctgcg accaatgtgc ataacgaaag aaaaattgtt acttttaaag tttgagtgtg
     2761 gtcatcggag cttgttgcga tttgctttca cacaaccctt atctcgattt ttacaaatca
     2821 acgcaccatg tcaactgtaa aatttgttgt cgaattaact gtccctgaca accggctgga
     2881 gagattcaag cgggtggcga aagaaatgaa ccaaatcgtg aagaatgacg agcctgacac
     2941 gttaagctgc aaatggtttt acatagctgg cgaaaataaa tggtgcctca cacaaaagtt
     3001 caaagactcc gacgctttct taaaacacct gcaccaggta agtgaagaaa tgaatgaaat
     3061 tcttgagatt tccaaagtgg agaggtttga agtattcgga gggctttcgt acgctgcccg
     3121 cgccgcgatc gcttcgttcg gtgtaaaaca ttatacatat tggactggcg ttgtccacta
     3181 aacctttggt agttactttc gtccctattc aaccgatgaa aaaaatcatc accacaatct
     3241 ttttgtttgc gagcctgtat gctgcaggac aggaaagcag cagttggtac aaaatgctca
     3301 caggcaatat tgacaagtat gcaataacga tgcacttgca caagcaggga cattcgtatt
     3361 ccggctacta ttactacaat tcccggcaat cgcccgttta tgtaatgggt gaagacacaa
     3421 gcgaaaaagg aaaaataaaa ttggcggcgt atgcggatcc taacgagccg gaatatttca
     3481 ctttctcatt cagtggcaat gccgcgagcg gaacatggcg aaaagataaa acactgagtt
     3541 tgtcactaac cgaagcgcac atgcccgtcg catttaccaa cgtgtacacg gaaggtgcgg
     3601 ttaagttacg cccggcagtt gaggattcgc ccgacgcaac ttttgaagcg gcgtctgttt
     3661 ggccacctgg caataccacg acagacgaat tcattaaatc ggaaatcagg aaactatttt
     3721 tccaaaaaga tgagggcggc gaaattggcg cgttattact aaagatgaag aaaaaatttt
     3781 ttgctgacta cctggaagaa aataaagatg taacgaatgc agaactaaaa gacagctaca
     3841 ccgcttatag catggatgta tccgataagc tcatgataat gttccaaacg tcaaacctgg
     3901 ttacactggc ttttgataac tatgcataca caggtggggc gcacggcaac tacggcactg
     3961 aatttaaagt gctcgatctc acaaaaaata gatcgttgac gttgccggat attttaactg
     4021 agagcggaat tgcgaagctg caacctaagc tcgaggctag ctttcgtaag cagttcaatt
     4081 tacaaccggg cgactcgttg accgatgcag gtttgttcga aaacaagatc gaggcgaacg
     4141 ataatatttg tgtcacgggc agcggactgc aatttgttta caatccatac gagatcggac
     4201 cttacgcaat gggagagatc gagcttttta tcccattcac agaactgacg gaatatttga
     4261 aaccgggttt caaaaactta ctcaaccaat aaaagaattt tcggcacttc tggagaagcg
     4321 ttggacgtcg tggctactgt ttaacaatcg cgttcggcat cggatagatc tcaaacgtat
     4381 gcaagccaga taaaatcgca ggatcatttt cagcgagggg ccgcgtctct gcttcgtcat
     4441 caacctggat tatgccaact ccgtacacac cactcggatc aagcactggt ccgaatgcaa
     4501 ccgcgattcc cttgtcaatc tgctccttcc agtattgaat atgttgcagc atgatgttgc
     4561 gttcatcgtg agtcatatcc attccaaatg ttggtcgcgg aggaatgagc ttgtacaaga
     4621 agactttctt caaagtgcaa aaggaattta cagatagttc tttatttcct ggaggagttc
     4681 tgtttttgtg atcggaatac ccatgacctt attatagcct tttgcgtcaa caaagaattt
     4741 gtcgcgaatg atcttcacga gctggccatt gttgatttca ggaacaagaa ccgtttgaaa
     4801 acttttgagg atctgagcaa gattttttgg gaacggacgt aagtaacgca agtgcgcgtg
     4861 gctcaccgca tggccttcag actgcagttg tccaacggcg cttttaatgg caccatatgt
     4921 actgccccag cccagtacaa gtaatttacc ggtagaaggg ccgctgtcaa gcgcctgtaa
     4981 tggaatataa tccgcgatgt tctctacctt ctgttcacgg atgttaacca tcagttggtg
     5041 attctcggga tcatagctta cattccctgt gatgttttcc ttttccaaac ccccgatacg
     5101 atgctcaagt tctgccgtac cagggatcgc ccacggccgc accaactttt catcacgttt
     5161 atatggcata aatttttctt catccgggtc caaaccttgc ttaaacttca cttcgatcgc
     5221 aggcagttca tccggtttcg ggaaccgcca gggctctgcg ccgttcgcaa tgtaaccgtc
     5281 gctcagaaag atcaccggcg tcatgtgttg aaccgagatg cgcaccgcct caaacaccgc
     5341 atcgaagcag tcactcggcg tgcgcgctgc aactaccggc atcgggcatt caccgttgcg
     5401 cccataataa gcctgtaaga gatcgctctg ttccgttttt gttggcaaac ctgtcgacgg
     5461 gccgccgcgt tgaatatcga tgatcagcaa tggaatttct aacacgacag cgaggcccat
     5521 agcctcagct ttcaatgcca tacccggccc tgacgtagta gtaacaccga ggctacctcc
     5581 gtagctcgca ccaatagcag aagtgatcgc cgcgatctca tcttccgcct ggaaagtttt
     5641 tactccaaag gccttataac gactaagctc atgcaaaatg tcagaagcag gagtgattgg
     5701 atagctaccg aggaacaagg gcaggccgct tttctggctt gcggcaataa gtccgtaagc
     5761 gagtgcctgg ttgcccataa taccgcggta cacacctgag ggaagtttcg ctttgtcaac
     5821 tttgtatctg gtggtaaacg tttccgtggt atcgccaaaa ttgtaacctg cctgcagcac
     5881 tttgatattg ctgttaaaga tcgtttcttt cttgccgaac ttttccttca ggaaattgat
     5941 cgtattatcc agagtgcgat tgtacatcca gtatagaaaa ccgagcacga acatgttctt
     6001 tgcgcggtct ttttctttca ttccgagttc gggaaagtct tttaatgatt cacgggtgag
     6061 cttcgttaca tctattttta tcacctcata gccgtcgagg ctgccatcgt ccagcggatt
     6121 aattccgtcg gtataattgg caaggcgaag attttttgcg tcaaacccgt caatgttagc
     6181 gatgatcttc cccccacgct ttaaactgtt caggttagac ttcaaagccg cggcattcat
     6241 cgcgacgagc acgtcgcaaa ggtctccggg tgtaaaaata cggctggaag aaaaatgcaa
     6301 ctgaaagccg ctaacgcctg gcaatgtacc ctgcggtgcg cgtatctcgg cgggaaaatc
     6361 cgggaaggtg gcaacatcaa ttcccaataa agcagtatta tttgtaaact gtgtgccggt
     6421 tagctgcatt ccatcaccac tatcaccagc aaacttgatc actacgtcgt tcagcagaac
     6481 atcttgtcgg ttcattaatt tgtatttagc aaaagcaatt gcgacaaaaa tactgataat
     6541 cccacgatgg gagtatgctt gtaattaaca aagggtgaaa atccgggcac catttcaacc
     6601 agaaaggagc gtgttttcgc ggccgacggc attcgcgcat gtttcagaaa aaatatttac
     6661 aggccgtgtt acttctcaac ttggggaatt acttcaccac tgctttccgc tttttcgcgg
     6721 cccaacgttt gtttcaaccc tgcggcacgt aaccacatgc gctcataaaa attggagcga
     6781 ttttttcact caaatccgga aataaaaaac aaggattttg tggttactat acctatgcct
     6841 gaaaagaccg gaacaaaaaa actttttgag acttcctaca ttataggcat tggcgcttcg
     6901 gcaggcggcc ttgatgctat caacgagatg tttgagaata tgccggacaa caccggtttt
     6961 tcttttgtga tcatccagca tatctcgccg gactataaaa gcctcatggc agaactggtt
     7021 gctaaacata ctgcgatgaa ggttgtagaa gccgcccacg aaatgctcgt tttgccaaac
     7081 catatttacg tgatcccctc taaaaaggta atgacgttga aatttggcaa actgctcctg
     7141 catgaaaaag aaagaaccaa atcaccaaac aatgccatag acgtgttttt tgaatcgctt
     7201 gcggaagacg caggcgaata cgctgtcggg gtgatcctgt ccggcaccgg caccgatggc
     7261 acacgcggat tggaagcaat aaaaagtaaa ggcggcttta tagcagtcca ggaacctatt
     7321 actgctgctt tcgatggcat gccaaacagt gcgatagcaa ctggcaaagc ggatatgata
     7381 gtttcacctg aaagaatggg tgaagagctt ctcgagtttc tgaatgaacc tccggagata
     7441 aaagcctttc acgcgcgcag tcagaaggac gagctctttt tacgcgacct gcttctgctc
     7501 atcaaggata gaactggtca cgatttcagc tattataagc gccctaccat ttgcaggcga
     7561 cttgcaaaaa ggctctcaga agtaggagta tccgacatac atacctacct cgctcatgtt
     7621 gaaacacacc cggaagaatt gtccgtcatc agcaaagact tccttatcaa tgtgagcggg
     7681 ttcttcagag acaaggaggc attcgacatc gttgccaccc gggtggtgcc ggccattgtc
     7741 aagaacaaga ctgatgatga tacaataaaa gcatggtgtg tggcatgcag taccggcgag
     7801 gaggcgtact cgcttgcgat attattcaaa gaagcgctcg aaagatcgaa ccgcaaaaat
     7861 ctgatcgtta aaatatttgc caccgatatt gacagggaag cactggagac cgcctcccgg
     7921 ggcttttatt caaagacgat cagccaggac atacctgcaa accgtttggc caggtatttc
     7981 ctgcccgaag aaaatgggta ccggatacat ccagacatca ggaagatggt cgttttctca
     8041 tatcacgaca tccttaaaga tccacccttt gggcgcatgg acatggtgag ctgccgcaat
     8101 atgcttatct acatcaaccc acagcaacaa aaggaaatcc agcggaagct tcattttgcg
     8161 ttaaaccttg gcggctttct tttcctcggc tcgagtgaaa acattggcat catgaatttg
     8221 gtgacggagg agatcgacag gaaatggaaa atatataaat gcacggcgaa gacgaggctc
     8281 gaagaataca acgcgatgtt ggtaccgctc gaaaagcgaa tgattgcgca tacgcagccg
     8341 cggcaaaaaa atccgttgaa tcatattgca gaactgttca atgaaacgct gctggaagac
     8401 catcacttct cgggcatatt tattaacacg gactttgaag ttaaacaggc aataggcagt
     8461 tataagaaat ttatcaattt cccggagagc agcttcaatc ttaatttgct taagatggtc
     8521 gacccggacc tgtctatcgt tctcagcgtg gcaataaaca aggcgatgcg tgacaaccag
     8581 ccggtcatca cgaggggcgt taagttaggc aataaggaaa atgtacggtc aataaatgtg
     8641 atcgtaaagc cttacttgca gatgccggac taccagcatt cctttctttt cattgcactg
     8701 gaagaggagg ataaaccgga ggcgggaaag tctgcgccgg cgtcagaaac attcactacg
     8761 gcgcaacgtg ttgttgaact ggaacaggaa ctgcaggaaa caaggtccaa ccttcaggcg
     8821 cttctggaag aagttgagac atccaatgag gaacttcgca gcgccaatga agaagcgata
     8881 tcaacgaatg aggaattgca gagcaccaat gaagagcttc agtcgctcaa tgaagagctg
     8941 catacggtta gtgctgaaca tcaattgaag ataaaagaat tgatggagtt gaatgatgac
     9001 ctcaataact atttcagaaa ttccgacctg ggacagatcc tcgtcgataa gcatctcatc
     9061 atcaggaaat ttacaccgtc ggtaaagccg atgatcaatt taattgaaac cgacatcaac
     9121 aggtcgctgc ttgatattac gacgcggata cgcaacaggg atcttatcca ggacatacgg
     9181 gatgtaatta agaccggcag aactttcgaa aaggaaatta ttctgaacga caatacggtt
     9241 tacctgatgc ggatcaatcc ttacctcaaa caggatcagt cgattgacgg agcagtgatc
     9301 aattttatcg atatcagcga actgacaaaa ctcaacagca tcgtgcaggc aattttcgaa
     9361 agttctgaaa atgcgatcac agctaaaaaa gcgattcgca atgagcacga tgaggtaata
     9421 gactttgaat acattgccgc taataaagcc tgtgaaaaac tatatggctt tcctgtagcg
     9481 accattattg gaaaacgaat gaggaccttc gacgaattga gaaaggacca ttttgcattg
     9541 ttcaggaaag ttgttgaaac cggcgagtcg atacaatacg aatactatga tgaccgcctc
     9601 gcaaaatggc tcaatatgtc agtggcaaag atgatggatg gaattgtagc gatcgcaacg
     9661 gacgtcacgg ctagcaaaaa agctgctgac ctcatcgcgc aacactatga agatctcaaa
     9721 gtcacgtcag gaaaactgga agcaagtaat attcaactgg agcagtccaa tttagacctt
     9781 atgcaatttg cttcggttgc ctcccatgac ctgaaagaac cgctgagaaa aattgaaaca
     9841 ttcggcaatc tcctgcaggc aaaattgaag gaccgttttg atgacggcga gatgaagtat
     9901 ttggataaga tcatcaagtc atcacaccgc atgcagtcgt tgatcgagga tgtgcttaca
     9961 ttttcgaagc tttcaaacaa cgaacttcct ttggaaaaaa tagatctgaa taagatcgta
    10021 aatcgtatac gtgaagacct cgaaataacg attaaagaga agaatgcaaa tattcaattg
    10081 cagccgttac cgactgtcga tgccgtaaaa ggacagatgc atcaactctt tcaaaacctt
    10141 atcagcaatg ccctgaagtt taacgataaa aaggaacctc acgttatggt aagcgaaaga
    10201 aacattccgc aatatcaagc agagagtctc aagataaatc cggaacatta cgtctgtata
    10261 agcgtaaaag atgacggcat cggcttcgaa gaaaaattca gggaaaagat attcgggatc
    10321 ttccagcggc ttcacggcaa tcaatttgaa ggaaccggca ttggacttgc gatctgcaag
    10381 aagatcatcg aaaaccacaa cggatttctg cttgcagaaa gcgcgttaga ccaaggcacc
    10441 gaatttttcg tgatactgcc acgcaacgcg aatggacgcg gatgagagtt tactgggata
    10501 ttaggtaatt ggtttatttg gttaacagtt tattgccggt tggcagatca cacaacgcca
    10561 cccaattacc ctaacgaact acccaattaa ccagttaacc aattaaccaa ttaaccgttc
    10621 tactgcttct ccttctcttc cgtcaaatag ataggcgaaa gaaaattact gttgctgatg
    10681 aatgcaatat attttccatt cgggctccat gacggtgtgt tcatcgtgcc ttgtcctcca
    10741 tacaaggtag cgatcacttt gggtttgccg ccatccgccg gcatcaatct tatataaacg
    10801 tgcttataaa atggatggtc agatggtttt acatcctgcc cgaaagaaac gaacacgatc
    10861 cactttccat cgggagaaat atgcggaaac cagttattga actcgtcatt tgtaagttgt
    10921 tccggtttgc tgccatcggg atgcattcgc catatttgca tcgttccgct gcgcacagaa
    10981 ttaaaataaa tgtacttgcc atcgggcgaa tattcgggtc cgtcatcgag gcctttagta
    11041 ttagtcagtt tcgtttctgt gccgctgccg tcagatgcaa tacgataaat gtcaaactca
    11101 tcatttcgct gccctacgaa agcgagatat ttcccatcag gactccagcc gtgcagatat
    11161 gaagggccgg ttggcgtaat ttgtttcggc tcgccgccag tgatgggaac cgtgtacacg
    11221 at
//
LOCUS       DASQJI010000102         5750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2157909,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000102 DASQJI010000000
VERSION     DASQJI010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5750
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2157909"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VEV83_03220"
     rRNA            complement(<1..373)
                     /locus_tag="VEV83_03220"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1127..2161
                     /locus_tag="VEV83_03225"
     CDS             1127..2161
                     /locus_tag="VEV83_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK44151.1"
                     /translation="MKKIFTIVIAIAIVNLVVSQNISGTVVTRTISSTYLQNNGGEDP
                     NRRISIYLPPAYDQSKQRYPVIYYLHGFMGNDSIYPGMKNILDMGIAKNKIRPYILVI
                     ADNNTLFSGSFYSNSTLTGSWTDFEAKELVAYMDKNFRTIASRNGRGIGGHSMGGYGV
                     LKIAMLYPDVFSCAYAMSPGLLAFVKEFGPNSDSYKQLAAIKTKEELDKTYYPRVIAA
                     CARAWSANLNKPPFYFDLPFNYINDSLVVDTAVYEKWRSNMPLYMIDKYTNNLKKLKA
                     IKLDWGRNDAPRFPLQCSMFSQELENHGIEHYAEEYIGTHTNKIWTTDGRVLNEMLPF
                     FNDYLQFDDK"
     gene            2285..3604
                     /locus_tag="VEV83_03230"
     CDS             2285..3604
                     /locus_tag="VEV83_03230"
                     /inference="COORDINATES: protein motif:HMM:TIGR00784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015137 - citrate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015746 - citrate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate:proton symporter"
                     /protein_id="HYK44152.1"
                     /translation="MLHALTRLMLAFYGFATILVFLVLIMTKRLSVITALVLVPVVFA
                     FIAGFDYKEIGAMALAGIRQVAPTGILLMFAVLYFSVMLDAGLFDPVIGLIVRSAKGD
                     PLKVVLGTALLTMLVHLDGDGTATFMIVLSTFLPIYKKLGMSRLLLAGIVALSVGPMH
                     LVPWSGTSVRAISTLNSDAVHIFNPNIPAMLAGLVWVLFVAYKFGRKERKRIGIIYLD
                     YKHTENFTEEQKLLRRPKLILINALLTVSLIVVLLMGEIPAPALFVVAGMIALMINYS
                     KLSDQQKILKAHGANIFLVSSMIFAAGVYSGILTESKMIETMANNLVTLVPKQHASLI
                     PVITAVISMPASILFTPDAYYYGVVPVLSHTCSQLGVDPLEIGRASLLGQMTVGFPLS
                     PLTASTFLLIGLAEVELGEHQRFVFKWAWGTTIVMTLIALLTASIHL"
     gene            3601..4929
                     /locus_tag="VEV83_03235"
     CDS             3601..4929
                     /locus_tag="VEV83_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HYK44153.1"
                     /translation="MKEKIRIGCGAGFSGDRIEPAVILADQGDLDYLVLECLAERTIA
                     LAQKRKLEDANKGYDPLLEKRIRALIPHLLRKNIRLITNMGAANPIAAAKKIIDIAAG
                     QNMHIKVAAITGDDLLATIQQKASTTKDLENGKWLSEYDIVSANAYMGATPIVEALQT
                     SAQIIITGRVADPSLFLAPMIFEFKWDENDFDLLGKGTVIGHLLECAGQVTGGYFADG
                     IHKKAEDLDKLGHPFADVFADGRAIISKVEGTGGVIDLQTTKEQLLYEVMNPREYFTP
                     DVVADFTSVHLKQIDKDQVYVSGGSGKAKPRTYKVSIGYKAFYLGEGEISYAGAAAYE
                     RAQLAADILQKRLADSFNELRVDFIGMQSKHQTTFKHEAKPYEVRLRIAAKASTPEQA
                     ALIGEEIEALYTNGPAGGGGARKYVTEVIGIVSTLIDRSSISPQVNIFQS"
     gene            4926..5225
                     /locus_tag="VEV83_03240"
     CDS             4926..5225
                     /locus_tag="VEV83_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44154.1"
                     /translation="MKLFDIAHSRAGDKGNTLMLSLIPYNEKDYPMLCSKITAEKVKA
                     HFKGIVHGDVTRYELPNINSLLFVCSDALSGGVTTSLALDTHGKSLSFALLEMEI"
     gene            complement(5309..>5750)
                     /locus_tag="VEV83_03245"
     CDS             complement(5309..>5750)
                     /locus_tag="VEV83_03245"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HYK44155.1"
                     /translation="TVTTVKGSAFFDSAESFGMIRAGKIDLTVLGAMEVSEKGDIANW
                     KIPGKMVKGMGGAMDLVASAKNIIVAMQHTNPKGESKLLAKCTLPLTGLACVKKVVTD
                     LAVLEITADGFLLTETAPGVSVDEIKAKTRGRLLVDSAVKEMNV"
BASE COUNT         1638 a         1220 c         1238 g         1654 t
ORIGIN      
        1 ttgaccaata ttccttactg ctgcctcccg taggagtcgg gcccgtgtct cagtgcccgt
       61 gtgactggtc gtgctctcac accagttact gatcgaaggc ttggtgggcc gttaccccgc
      121 caactaccta atcaggcgca cagccatctt caagtgataa atctttaaaa ttaaaaagat
      181 gccttttcaa tttactatag ggtattaatc cggatttctc cgggctattc cccgctcgaa
      241 ggaaggttct gtacgtgttc cgcacccgtt tgccggtcgc catcaagtat tgctactcat
      301 gctgcccctc gacttgcatg tattaagcct gccgctagcg ttcatcctga gccaggatca
      361 aactctccat tgtaaaagaa ttgatctgac tataattctc ttagaaaatt aacgtcggat
      421 ttaataaata taattgtgct tataacctta ccgtaaatat cgctatttac gtactgttac
      481 tttccatctt tcaaagaact aacctccatc tccttgcgga actgaagatg tgtgatgcaa
      541 atggagttga accatttcgc agccatcctg ctacatctta tataagaact gttttttgtc
      601 ccgttttatt ttggggttgc aaaagtaaga gccgcattat tcccctcaaa atttttctcg
      661 atgaaatttc aagctatttc ttaaactcct cttgctaaat tatgtgaaaa aactgactga
      721 ttttttttgc ggactgcaaa gataaaacaa cgcaagttcc tgagcaaatg attttgtttt
      781 atctaaagca gtttaacttt tttatcaatg aactgaggct ttcgggaaaa gcggctgcaa
      841 agatataggt caataagtta caggcaaaat gtttttgaaa ataaataatt gacaacatgc
      901 ttttattata attgagataa accgcaaaag aacatgatca agatccaagg tctgtaccca
      961 tccctcattg aataaaatgt aatcagtttt cattgccggg cgacaggcgt tggctttggt
     1021 tcccggaagg ttttatatgc tgaactcttt ccgatcctca ctcaaaatgc gcctatagca
     1081 ggccgcagtt aaacaattta acccacagcc aatcgtaaat tgcatcatga aaaaaatctt
     1141 taccattgtt attgcaattg ccattgtaaa cctggttgtc agccaaaaca tttcgggaac
     1201 tgtggtaaca cgaaccatta gttcgactta tctccaaaac aacggcggcg aggatccaaa
     1261 cagaagaatt tcaatttacc tgccgccggc gtacgatcaa tcaaaacaac gataccctgt
     1321 tatttattac ctgcatggtt tcatgggcaa cgattctatt tatccgggca tgaaaaacat
     1381 tcttgacatg ggcatcgcga aaaataaaat tcgtccatac atccttgtaa tcgccgataa
     1441 caacactttg ttctcaggca gtttttacag caactcgacg ctcaccggta gctggactga
     1501 ttttgaagcg aaggaattgg tcgcgtacat ggacaagaat ttcagaacca ttgcaagccg
     1561 gaacggtcgt ggtatcggtg gacattcaat gggtggttat ggagttttga aaattgctat
     1621 gttgtatccc gatgttttta gttgcgccta tgctatgagt cccggcctgc ttgcttttgt
     1681 aaaagagttt ggaccgaaca gcgactcata caaacaactc gctgccatta aaacaaaaga
     1741 agagctcgat aaaacatact acccgagggt aattgctgcc tgcgcaagag catggtcggc
     1801 caatctaaat aaaccgcctt tttattttga tcttcctttt aattacatca atgacagtct
     1861 tgttgttgat acggccgttt atgaaaaatg gcgcagcaat atgccccttt atatgataga
     1921 taaatacacg aataacttaa aaaaattaaa agcaattaaa ctggactggg gcagaaatga
     1981 tgcccctcgt tttccattgc agtgctctat gttcagccag gaattggaga atcatggcat
     2041 tgagcattat gcggaagagt atatcggaac acacacaaat aagatatgga caaccgatgg
     2101 aagagtgctc aatgaaatgc ttcctttttt caatgactat ttacaatttg atgacaagta
     2161 acttttgttg gcgtgtttca gcgcccacgt catcgcccgc cgtatgatga acatcgttta
     2221 cgcatataat taaaaagtga aaacacagta tcaaaacgct ttttactttt gaattccagt
     2281 ttgtattcta catgcattaa caagactcat gctcgcattc tacggcttcg ctacaatact
     2341 tgtttttctc gtgctgatca tgacgaagcg tttgtctgta ataactgcat tggtgttagt
     2401 gcctgttgtg ttcgcgttca tcgcaggatt tgattacaaa gagattggag cgatggcatt
     2461 agccggaatt agacaagttg ccccaacagg gatcctgctg atgtttgcgg tactttattt
     2521 ttcggttatg ctcgacgccg gcttgtttga tcctgtaatt ggattgatcg ttcgatctgc
     2581 aaaaggcgat ccgcttaaag ttgttttggg aacggcttta cttaccatgc tggtacattt
     2641 ggatggagat ggcactgcta ctttcatgat cgtgctgtca acgttcttac caatttacaa
     2701 aaagcttgga atgagccggc ttctgctggc aggcatcgtt gcattgagtg tcggacctat
     2761 gcatttggtg ccctggtccg gaacgtctgt acgagccata tcgaccttga attccgatgc
     2821 agtgcatatt ttcaatccga atattcccgc aatgctcgcc ggactggtat gggttctgtt
     2881 tgttgcatac aaatttggca gaaaagaaag aaaaaggatc ggtattatat atcttgatta
     2941 caaacacaca gaaaacttta ccgaggaaca aaaactgttg cgaagaccaa aacttattct
     3001 catcaatgcc cttctcaccg tatcgttgat tgttgtttta ctgatgggtg aaataccggc
     3061 accggcttta tttgttgttg ctggtatgat tgcattaatg atcaattaca gcaaattatc
     3121 cgaccagcaa aaaatattga aagcgcatgg agcaaatatt tttcttgtat caagcatgat
     3181 attcgcggca ggtgtgtatt caggtattct gacagaatca aagatgatag aaacgatggc
     3241 gaacaatttg gtgacgcttg ttccgaaaca acatgcatcg ctcatcccgg taataactgc
     3301 tgtaataagc atgcctgcaa gcattttgtt cacgcccgat gcgtattatt atggtgttgt
     3361 tcccgtgctg agtcatacgt gttcgcagtt aggcgttgat ccgctagaga tcggaagagc
     3421 atccttattg ggacaaatga ctgtgggctt tccgttaagc ccgcttacag cttctacgtt
     3481 tctattaata ggtttggcgg aagtagaatt gggagagcac caacgattcg tttttaaatg
     3541 ggcctgggga acaacgattg taatgaccct tatagcgctt ttaacagctt cgattcattt
     3601 atgaaagaaa agatacgaat aggatgtggt gccggctttt ccggtgacag gattgaacct
     3661 gctgtaatac ttgcagacca gggtgacctt gattatctcg tgttggaatg tttggcagaa
     3721 cgcacaatag ctctcgcaca aaaaagaaaa ttggaggatg caaacaaagg ctatgatcct
     3781 ttacttgaaa aaagaataag agcgttaatt ccgcatcttt taagaaagaa tatacgactc
     3841 attacaaaca tgggggctgc aaatccaatc gctgcagcaa aaaaaattat tgatatcgct
     3901 gccggacaaa acatgcatat aaaagtggct gcaattaccg gtgatgacct gctcgcaaca
     3961 attcaacaaa aagcatcaac tacaaaagac cttgaaaatg gtaaatggtt aagtgaatat
     4021 gatattgtgt ccgcgaatgc ctacatggga gcaacaccaa ttgttgaagc actgcaaacg
     4081 agtgcacaaa taattattac cggaagagtt gcagatcctt ccctgtttct tgctccaatg
     4141 atctttgaat tcaaatggga tgaaaatgat tttgatcttt tgggcaaagg gacggttata
     4201 gggcatttgc ttgagtgcgc aggccaggtt actggcggat attttgcaga cggcattcat
     4261 aaaaaagccg aagacctgga taaactggga cacccattcg cggatgtttt tgctgatggc
     4321 agagctatta tcagcaaagt tgaaggaaca ggaggcgtca tagatcttca aacaacaaaa
     4381 gaacaattgt tgtacgaagt aatgaacccg cgcgagtatt ttacgcctga tgttgtcgct
     4441 gattttacat ccgtacatct caaacaaatt gacaaagacc aggtgtatgt atcaggcgga
     4501 agcggtaaag caaaacccag aacatataaa gtaagcattg gttacaaagc tttctattta
     4561 ggtgaaggtg agatttcgta tgccggtgcg gcggcttatg aaagagcgca actcgcggca
     4621 gatattctgc agaaaagatt ggccgattca ttcaacgagc ttcgtgttga ttttataggc
     4681 atgcaatcca aacaccaaac gacatttaag catgaggcaa aaccttatga agtaagactt
     4741 cgtatagcag caaaagcgtc cacgcctgaa caggctgcct taattggcga agaaattgaa
     4801 gccttatata ccaatggtcc cgcaggggga ggtggtgcaa gaaaatatgt aacggaagtt
     4861 atcggcatcg tgtcgacatt aattgatcgc agcagcattt ctccacaggt aaacattttc
     4921 cagtcatgaa attgtttgat atagcgcaca gtcgtgcggg cgataaaggc aacacactga
     4981 tgctctcgct tatcccatat aatgaaaaag attaccctat gttgtgctcg aaaatcacag
     5041 ccgagaaagt gaaagcacat ttcaaaggca tagtgcacgg cgatgttact cgctacgaac
     5101 tacctaatat aaattcgttg ctttttgtgt gcagtgatgc gctatcaggt ggtgttacca
     5161 cctctctggc actagataca cacggtaaat cgttgagttt tgctttactg gagatggaga
     5221 tataacgctg aagttcctgg tcgggcacag tttctggaac gaagcggcat gaaatcatct
     5281 tgcggcgatc gaaggacgaa ggcgtgcttt aaacgttcat ttctttcacg gcactatcta
     5341 cgagcagtct tccgcgggtt ttagccttta tttcgtcaac actaaccccg ggtgctgttt
     5401 ccgtcagcag aaatccgtcg gccgtaattt cgagtactgc aagatccgtg accacttttt
     5461 ttacgcaggc taatcccgtc aacggcaatg tgcattttgc gagcagcttg ctttctcctt
     5521 tgggattcgt gtgttgcatt gcaacaataa tattttttgc gctcgcaaca aggtccatcg
     5581 caccgcccat ccctttcacc atctttccgg gaattttcca attggcaatg tccccttttt
     5641 cgcttacttc catcgcgcca agtaccgtga gatcgatctt gcctgcgcgg atcatcccaa
     5701 aactttctgc gctatcaaag aaagcgcttc ctttcaccgt tgtcaccgtt
//
LOCUS       DASQJI010000103         8586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2311712,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000103 DASQJI010000000
VERSION     DASQJI010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8586
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2311712"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..876)
                     /locus_tag="VEV83_03250"
     CDS             complement(103..876)
                     /locus_tag="VEV83_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002981231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYK44156.1"
                     /translation="MKIALFSDIHANLPALEALFADVTAREPDAIYCLGDLVGYNIWP
                     NEVINEIRKRGIPTIAGNYDFGIGRMSDDCGCAYKTDEEKSMGAVSISFTNQIVGEEE
                     RKYLRTLPAHINVEFQLNNDKINLLLVHGSPRRINEYLFEDREEKSLLRILEGANADI
                     MCFGHTHKPYHRILPGEPGENPHYRHAINIGSVGKPKDNNPKGCYVLLTINADTNISS
                     TETVQVEFVRFDYDIEKAARAVEKSSLPNGYAEMLRKGF"
     gene            complement(973..1467)
                     /locus_tag="VEV83_03255"
     CDS             complement(973..1467)
                     /locus_tag="VEV83_03255"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK44157.1"
                     /translation="MVVIEPMHSQDWQAVKDIYTEGIGTGNATFEQNAPDWEQWNAAH
                     VTHSRLVAKDNNGTIIGWAALTPVSGRCVYAGVGEVSVYVSERARGKGFGKVLLQKLI
                     EESEANNIWTLQAGIFPENIASVKLHELCGFRIVGTRERIGQMNSRWRDTVLLERRSK
                     KVGT"
     gene            complement(1479..2327)
                     /locus_tag="VEV83_03260"
     CDS             complement(1479..2327)
                     /locus_tag="VEV83_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HYK44158.1"
                     /translation="MNNDNSVKAMVREKYSAIAQQEKETNESSCCGSGCCTVENSAIM
                     ADEYSDMAGYNPDADLGLGCGLPTQFAKIKKGDVVIDLGSGAGNDAFIARHETGETGK
                     VIGIDFTPAMIERARHNAEVRGFHNVEFRQGDIEKMPVTSNIADVIVSNCVLNLVPNK
                     DGVFKEIYRVLKPGGHFSISDIVLVGELPDTIRNAAEMYAGCVSGAIQKEVYLQLIES
                     NKFKRLTVQKEKTILVPDDILRNYLSDDQIAAFRNSGAGIYSITVYAEKPVAAEEVCC
                     EPGCCN"
     gene            complement(2429..2758)
                     /locus_tag="VEV83_03265"
     CDS             complement(2429..2758)
                     /locus_tag="VEV83_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYK44159.1"
                     /translation="MGATKSLEFSSKENRLAKYAKALGHPARIAILNLLIQKQACMCG
                     HIVDELPLSQSTVSQHLKELKDAGLIKGDIDGAKVCYCIDEKEWKAAQASLNKLFEAY
                     KGANNCC"
     gene            complement(2961..3395)
                     /locus_tag="VEV83_03270"
     CDS             complement(2961..3395)
                     /locus_tag="VEV83_03270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44160.1"
                     /translation="MNKALIWLPAFLTIGVTTLYKPVKEASKPKIEDKAVSLVIYKAA
                     DYTAPIYNNSTAEAQITIEKVNGKGQRVILWGKTISSETLSEYPTLSSAQPENITVPN
                     VNKKSEHLEVTYVLTYNSNGSELQMQGGDVITEANHNVHIKI"
     gene            complement(3536..4759)
                     /locus_tag="VEV83_03275"
     CDS             complement(3536..4759)
                     /locus_tag="VEV83_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HYK44161.1"
                     /translation="MKKIFTNLTFWVLTAITCGILLGNFYPETAVKMKVLGDYFISVI
                     KCFIYPIIFLTISLGISNMGDLKKVGRVGGKAILYFEIVTTMALLIGILVAHLIQPGS
                     GVNANNIKGDDVSGYITRAEEFSWWHFLKDNFTLQVLLLAIITGVWLSKYKKKQKIVQ
                     PLSLISKYVFKALHFVMLVAPLGAFGGMAYTIGKFGLQTLLPLGKLMACVYITCLIFI
                     FLVLGLMLRYYRVSIFRYLRYIRAELLIVLGTSSSEAALPSLIEKLEQIGCSNSVTGL
                     VVPAGYSFNLDGTTIYLSMAVMFLTQVYQVHLTTTQIFSIIGILMITSKGAAGVTGSG
                     FVVLASTLDAIKVIPLESLALLLGVDRFMSEARSLTNFIGNGAATIWLANNEREFDRT
                     KMETAFKREPQKPLL"
     gene            complement(4854..7004)
                     /gene="ligD"
                     /locus_tag="VEV83_03280"
     CDS             complement(4854..7004)
                     /gene="ligD"
                     /locus_tag="VEV83_03280"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HYK44162.1"
                     /translation="MNISPMLATLVDKPFDEPGWLYEVKWDGYRAIAYLNNGEVNIRS
                     RNNKSFNEKFYPVYDALLTWKINAVFDGEIMVVNDKGISDFSDLQAWRSEADGQLVYY
                     FFDILWLDGHDLMELPLTKRKEILRSIIPKSNILRLSESFDTGATEFFKVAQQMHLEG
                     MIAKKADSIYKPGFRTKDWLKIKTKSRQEMVIGGYTKNENTSRQFSALLMGVYDENGD
                     FNFVTPVGTGFSNKAQTELLKKFKPITIAKCPFRVVPDYNKPSRFRPNPPKAEVTWVK
                     PQFVAEVSFAEETKDGAIRHPSFEGLREDKNPKEVRRESTEHVEEFVERTHASTTKSQ
                     IPNDKSQAPKNRSINSKTDMKEATKIVKNKTPEKSASQKEDLTTKLLKASSNSERKTL
                     LNPTDKSQTRNINGHDITFNNLDKIYYPPIKGQKAVSKRDVINYYYQVAPYMLPYMKD
                     RPQTLIRYPNGIEGESFYQKDVTGKVPDWVAQFPYSSEAGGNRNFLVCTNEASLLLIA
                     SLGGLEMHPWSSRVQKPDNPDWCIIDLDPSETTTFDQVIKAAQTTKQVLDTIDVPAYC
                     KTSGATGIHIYIPLGAQYNYEHSKEFGRVLVRIVHAQIPSFTSIERIVENRKGKMYLD
                     FLQNRPQATLAAPYSLRPKPGATVSMPLHWEEVKKGLKMKQFHIFNAVERVKEQGDIF
                     NGVLAKGISMKEVLKRIEAVFGPQEMHQSLRKLK"
     gene            7247..>8586
                     /locus_tag="VEV83_03285"
     CDS             7247..>8586
                     /locus_tag="VEV83_03285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44163.1"
                     /translation="MKKSTSFFPICMLLSTIAFSQAGTLDSTFGVDGKVITHFGSYRY
                     GGGSAMALQPDGKIVVAGTSSDSKNGDFAVARYNPDGELDSSFGVDGKLMTDLNDSRD
                     EASSVNVLDDGKILVTGSTLGKSYFAMVRYTSNGTIDSGFGTDGKVISDLTTRAHNVL
                     ILPDGKILLDAVVYLEWPNSAFFMTRYNPNGTPDSSFGVNGFGDTIYFNDAFASSAIA
                     LQNDGKIIVAGSAGVTEGDGSYFEALRLNADGTIDKAFGSNGRVITFHIWDWARAFAV
                     IVQPDGKIIQAGDRLNVKDDFVFALVRYKSNGELDSSFGIDGTMFTDFGQGRDARIQS
                     VAIQSDGKIVAAGQSGNGTFEAHDFALARYTKDGQADSSFGRKARTTTDFANGGDYGD
                     IAYAVSVQADGKIVAAGSAHNDFALARYNNEEVLAASIINLKAYTVGTHVKIEWT"
BASE COUNT         2217 a         1948 c         1798 g         2623 t
ORIGIN      
        1 aatggtggga ttgcggtgcc tctaacaaga ctgtcttcaa ttggcttgat gaaccaggaa
       61 ttgtttttct tgaaatcttt gatgattgat ttcctggata atttaaaatc cctttcgcag
      121 catctcagca taaccgtttg gcaaagaact cttttccaca gctctggcag ctttttcgat
      181 atcataatca aaccggacaa actctacctg taccgtctct gtgcttgaaa tattggtgtc
      241 agcatttatc gtgagcagca cataacagcc ttttggatta ttgtcttttg gcttgccaac
      301 tgagccaata ttaatggcat gccgataatg agggttttcg cccggttcgc cgggaagaat
      361 gcgatgatat ggtttatgtg tatgaccgaa gcacatgata tcggcgttgg cgccctccaa
      421 aattctgagt aaactttttt cttcccggtc ttcaaacagg tattcattta ttcgtcgcgg
      481 actgccatgt actaacagca aattaatttt atcattgttc aactggaatt cgacattgat
      541 gtgtgcgggt aacgtgcgca agtattttct ttcttcctct ccgacaattt gattggtgaa
      601 cgaaatcgat acggcgccca ttgatttctc ttcgtccgtt ttataagcac aaccgcaatc
      661 gtcactcatt cttccaatac caaaatcata attgcccgcg atcgtcggga tgcctcgttt
      721 tcgaatttca tttattactt catttggcca gatgttataa ccaaccaaat caccgaggca
      781 atagatcgca tccggctccc tggccgtaac atctgcaaat aatgcctcca acgcgggaag
      841 gtttgcatgg atgtctgaga aaagagcgat tttcatttac ttaaatttga aagacggaaa
      901 atgtagaata accaattcct taatatcctt tagtgttagt tggcgcgcac cagcgctatg
      961 aataatattt ttttatgtgc ctactttctt gcttctgcgt tctaacagca cggtatcccg
     1021 ccacctggaa ttcatttgtc caattctttc tcttgtgccc acaatgcgaa agccacacaa
     1081 ctcatgcaat ttcacactgg caatattttc cggaaaaatg ccagcttgca gcgtccaaat
     1141 attatttgct tcactttctt caatcaactt ttgaagcaac acctttccga agcccttgcc
     1201 tcgcgcccgc tcactcacat aaacactaac ctcgcctacg ccggcataca cgcacctgcc
     1261 ggaaaccggc gtaagtgctg cccatcctat tattgttcca ttattatcct ttgcgactaa
     1321 ccggctatgc gttacatgtg ctgcgttcca ttgttcccag tccggcgcat tttgttcaaa
     1381 cgttgcattt cctgtcccaa tgccctctgt ataaatatct tttacagcct gccagtcctg
     1441 cgagtgcatg ggttcaatta ccaccatagt gcttcttatt aattgcagca gccaggctca
     1501 cagcacactt cttctgctgc aaccggcttt tctgcgtaga cagtgatact atatatacct
     1561 gcccctgaat tccggaatgc tgcaatttgg tcatcagata agtaattacg caaaatgtca
     1621 tcgggcacaa ggatggtttt ttctttttga accgtcaagc gtttgaattt attcgactca
     1681 atgagttgaa ggtaaacttc cttttgtatt gcacccgaca cacagcctgc atacatttcc
     1741 gctgcgtttc tgatcgtatc cggcaattct ccaaccagga ctatatcgga aatgctgaag
     1801 tggccgccgg gcttaagcac gcggtatatt tccttgaaga cgccgtcttt gtttgggacc
     1861 aggttcaata cacaattgct tacaatcacg tccgcaatat ttgaggtgac gggcattttt
     1921 tcaatatcgc cctggcgaaa ctctacattg tgaaagccac gcacttcagc gttgtgcctt
     1981 gcacgttcga tcatcgcggg cgtaaaatcg atcccgatca cttttcccgt ttcaccggtt
     2041 tcatgccgcg caataaaggc gtcattgcca gcgccacttc caagatcaat cactacgtct
     2101 ccctttttta ttttggcaaa ttgagttggc aggccgcagc ccaacccaag atctgcatca
     2161 ggattatatc ctgccatgtc gctgtattca tccgccatga tcgcggagtt ttcaactgtg
     2221 caacatcccg aaccgcaaca agaggattcg tttgtttctt tttcctgttg ggcaatcgcg
     2281 gaatatttct cgcgcaccat tgcttttaca gaattgtcat tgttcatatt ttttgttttg
     2341 atttttttta gtctgttttt tagaagtagt atgatgtcat caaatgcaat ctatattgta
     2401 atattacgat aatacaattc aaaaaaaatc agcaacaatt gttggcgccc ttgtatgctt
     2461 cgaagagttt attcagcgat gcctgcgcgg ccttccactc tttttcatcg atgcaataac
     2521 agactttggc gccatctata tctcctttga ttaatccggc atccttcaat tcttttaagt
     2581 gttgcgacac cgtactttgc gatagcggca gctcgtcaac aatatggcca cacatacaag
     2641 cctgcttttg aatgagcaga ttcaaaatcg ctattcgtgc aggatgaccc aatgctttgg
     2701 catatttagc aagcctgttt tccttactgc tgaactctag tgatttagtc gctcccataa
     2761 tattgtgatc gcaatattac gattaatttc cggtggtcaa aaattatttt tttgaaatgt
     2821 cgtcgcacct ggttaatctg cggcagttgc ccgatctcaa ctgctatggc atttattatg
     2881 agcagttcag tcggctttgt gattttccaa aaaaaaagcc ccatgtggag gcttcgatgt
     2941 agtggaatat gtagaagtga tcagattttg atatgtacgt tatggtttgc ttctgttatc
     3001 acatcgccac cctgcatctg gagttcgctg ccatttgaat tataagtcag gacatacgtt
     3061 acttcaagat gttcactttt cttgttgaca ttcggcactg tgatattttc cggttgcgcg
     3121 ctgctcaaag tcgggtattc actcaatgtt tcagagctga tcgtttttcc ccaaagaata
     3181 acgcgctgac ctttcccatt tactttttca attgtgattt gtgcctccgc tgttgaatta
     3241 ttatagattg gagctgtgta atcggcggct ttgtatatca cgagtgaaac ggctttgtct
     3301 tcaatttttg gtttgctggc ttcctttacc ggcttgtata aagttgtaac tcctatcgtg
     3361 aggaaagcgg gtaaccatat tagagcctta ttcataaaat gttttttgta cttgttttta
     3421 aatttaaccc aacctaacgg tgaagtacca gatgagaagt gggccacata tctgtcggga
     3481 ttagaaacgt tagggtaaca cctttgaatt tcaaactgaa acagttagca gaacattaaa
     3541 gcaaaggctt ttggggctcg cgtttgaaag cagtttccat tttagtacgg tcgaactcgc
     3601 gttcgttgtt tgcaagccaa attgtggccg cgccgtttcc aatgaaattt gtgagcgatc
     3661 tggcctctga catgaaccgg tctaccccaa gcaacaaagc gaggctttcc agcgggatga
     3721 cttttatggc gtccaatgtg gaggcaagga cgacgaatcc gctgcccgta acaccggctg
     3781 ctccctttga ggttatcatc aagattccaa tgattgaaaa aatttgtgtt gtcgtaagat
     3841 gcacctggta aacttgggtg aggaacatta cggccattga aagataaata gtagtgccgt
     3901 ccaggttaaa ggaatacccg gcaggcacca caaggccggt aaccgaattc gaacagccaa
     3961 tttgttccag cttttcaatg agcgatggca gagccgcttc tgaagaggaa gtgcctaaca
     4021 cgatgagcag ttctgcccgg atatatcgca ggtaacgaaa aatacttacc cggtaataac
     4081 gaagcatcag gcccaggaca aggaatatga agatcaaaca agtgatgtaa acgcaagcca
     4141 ttagctttcc taagggcagc aacgtttgca atccaaattt tccaattgtg tatgccatcc
     4201 caccaaatgc tccgagcggt gcgaccaaca tgacaaaatg cagagcctta aaaacatatt
     4261 ttgagatcaa actgagcggc tgtacgattt tttgtttctt tttgtatttg ctcaaccaga
     4321 cccctgtgat gatcgccagc aataacactt gaagcgtaaa gttgtctttc aaaaagtgcc
     4381 accagctaaa ctcttctgcc cgcgttatgt aaccagagac atcatcgccc ttgatgttgt
     4441 ttgcgtttac accactacca ggttgaatga ggtgagccac cagaatgcca attagcaacg
     4501 ccattgtcgt aacgatctcg aaatacaaga tcgcttttcc acccacccgg ccaacttttt
     4561 tcaggtcgcc catgttgctg atgccaaggg agatggtaag aaatattatt gggtatatga
     4621 aacacttgat gaccgaaata aaatagtcgc caagaacctt catcttgacc gcagtctccg
     4681 gataaaaatt accaagcagg atcccgcatg taattgcagt aagtacccag aaagttagat
     4741 tggtgaaaat ttttttcatc gcgaagagaa ataaaattag caagcacgga gaagatgatc
     4801 acaaaaaatg tgtgaggata ttgcggaact gtgaggcaaa atttctataa acgttatttt
     4861 aattttctta gggactgatg catttcctgt gggccgaaaa cagcttctat tcgttttaat
     4921 acctccttca tgctaatacc tttcgccaat acgccgttga aaatatcacc ttgctccttc
     4981 acccgctcca ctgcattgaa aatatgaaac tgtttcatct taagtccttt cttcacctct
     5041 tcccaatgta acggcattga cacggttgcg ccgggttttg gccgtagtga gtacggcgca
     5101 gcgagcgttg cttgcggccg gttctgcaaa aagtccaaat acatttttcc tttccggttc
     5161 tcaacgatcc gctcgatgct tgtaaaggat gggatctgcg catgcacaat tcttacgagc
     5221 actctgccaa attctttgct atgctcatag ttgtattgtg caccaagagg aatatatata
     5281 tgtataccgg tagcgcctga agtcttgcaa tatgcaggca catcgatcgt gtccagcact
     5341 tgcttcgtgg tttgcgccgc tttgatcacc tggtcaaacg ttgtcgtttc gctcggatca
     5401 aggtcgatga tacaccaatc cgggttatcc ggtttctgca ccctgctgct ccacggatgc
     5461 atctccaaac cacccagaga cgctatcaac aataagcttg cttcattcgt gcatacaaga
     5521 aaattacggt taccacccgc ttcacttgag tatggaaatt gtgcaaccca atccggaact
     5581 ttaccggtaa catctttttg ataaaaactt tcgccttcaa ttccatttgg ataacggata
     5641 agtgtttgtg gccggtcttt catgtaaggc aacatgtaag gagcaacctg gtaatagtag
     5701 ttgattacat cacgcttgct cacagctttt tggcccttaa tcggcggata gtaaattttg
     5761 tcgagattgt tgaaggtgat atcgtgcccg ttgatatttc gcgtttggga tttatcggtt
     5821 ggattaagaa gtgttttacg ttcggaattt gatgaggctt ttagaagttt ggtggtcagg
     5881 tcttcctttt ggcttgcgct tttttccggc gttttatttt tgacaatttt tgttgcctct
     5941 ttcatgtccg tttttgaatt tatggatcgg ttttttggag cttgtgattt gtcatttgga
     6001 atttgcgatt tggtggttga agcatgcgtg cgttcaacaa attcttcaac atgttccgtg
     6061 ctctctctcc ttacttcttt cgggttcttg tcttcgcgta atccttcaaa tgaaggatga
     6121 cgaatggctc cgtcttttgt ctcttctgca aaactcactt cagcaacgaa ctgtggtttt
     6181 acccatgtca cctctgcttt aggcggatta ggacgaaatc gcgatggctt attgtaatcc
     6241 ggcaccaccc taaacggaca ttttgcaatt gtaattggtt tgaatttttt caacagctca
     6301 gtttgtgcct tattcgaaaa accggtaccc accggcgtaa caaaattgaa atcaccgttt
     6361 tcatcataca cgcccattaa aagagcgctg aattgccggg atgtgttttc gtttttcgta
     6421 taacccccga tcaccatttc ctggcggctc ttggttttta ttttcaacca gtcttttgtg
     6481 cgaaatcctg gtttataaat actgtcggct ttcttggcaa tcattccttc caaatgcatt
     6541 tgctgagcca ctttaaaaaa ttcagtcgcg cccgtatcaa aactttcact caatcgaaga
     6601 atatttgatt tcggtatgat agaccgtaga atttctttac gttttgtaag cggcaattcc
     6661 atcaggtcat gaccatccag ccataaaata tcgaagaaat aataaaccag ctgtccatct
     6721 gcttcgcttc tccatgcctg gaggtcgctg aaatcagaaa tgcctttatc atttaccacc
     6781 atgatctctc cgtcaaatac agcatttatt ttccaggtca gcaatgcgtc ataaacggga
     6841 taaaattttt cgttgaagct tttattgttt ctcgacctaa tgtttacttc cccgttgttc
     6901 aaataagcaa ttgcgcgata gccgtcccat tttacttcat ataaccagcc gggttcatca
     6961 aaaggtttat caacgagcgt tgccagcatg gggcttatgt tcactggcaa ggatgttttc
     7021 gttgcctttg aaaaatttag gttaatgatc tttgctgaag gcataatata aacataaaga
     7081 aattgtgcca aaacttttgc ttcgcccttt ccggatagcg tgccatacga aaattatccc
     7141 aaaaaattta tcgtcaatcg acggtttttt tattgtccac attttttatc ttcaaataaa
     7201 ttccatctgc tgaaacctca ttttgaaaac cgttaataaa cctttcatga aaaaatctac
     7261 ttcttttttc ccgatatgca tgctgttaag tacaattgca ttctcacaag ccggcaccct
     7321 cgattctact ttcggcgttg acggcaaagt gatcactcat tttggaagtt atcggtatgg
     7381 cggcggatct gccatggcct tgcaaccaga cgggaaaatc gttgtggcgg gtacatcttc
     7441 tgattccaag aacggtgatt ttgcggtagc ccgatacaat ccggatggag aactcgacag
     7501 ttcttttggg gtcgatggca aattaatgac agatttgaac gatagcagag atgaggcttc
     7561 ttccgtcaat gttttagatg atggaaagat acttgtgacc ggatccacct taggcaaatc
     7621 gtatttcgct atggttagat acacgtccaa tggaacaatt gacagtggtt ttggaacgga
     7681 tggtaaagtt atttctgatt tgacgacccg cgcccacaac gttttgatac tgcccgatgg
     7741 aaaaattttg ctggacgcgg ttgtgtatct tgaatggcca aacagcgctt ttttcatgac
     7801 acgctacaat ccaaatggaa cccctgacag cagttttggt gtgaatggtt tcggagatac
     7861 aatttatttt aacgacgcgt tcgccagcag tgccatagct ctgcaaaatg atggaaaaat
     7921 catcgttgct ggctctgccg gagtaacaga aggagacggt tcttattttg aagcgttacg
     7981 gctgaatgcg gacggaacaa tcgataaggc ttttggctca aacggccgcg ttattacatt
     8041 tcacatatgg gattgggctc gcgcctttgc agtgattgtg caaccggatg gaaaaattat
     8101 tcaggccgga gatcgcctga acgtgaagga tgattttgtc tttgcattag tacgctacaa
     8161 atcaaatggt gaacttgaca gctctttcgg catagacggc acaatgttta ctgattttgg
     8221 acagggtaga gacgctcgca tacagtccgt tgcgatacag tccgacggaa aaattgtcgc
     8281 agcaggtcag tccggtaacg gaacttttga agctcatgat tttgcgctgg cccgatacac
     8341 aaaagatggt caggctgata gttcgtttgg cagaaaggca agaaccacca ctgattttgc
     8401 aaatggcgga gattacggag acatcgctta cgcagtatcc gttcaagccg acggaaaaat
     8461 agttgcagcc gggtctgcac acaacgattt cgcactcgcc aggtataaca atgaagaagt
     8521 acttgcggcc agcataataa atctcaaagc atatacagtt ggcacccatg taaaaattga
     8581 atggac
//
LOCUS       DASQJI010000104         2410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_622295,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000104 DASQJI010000000
VERSION     DASQJI010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622295"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..721
                     /locus_tag="VEV83_03290"
     CDS             284..721
                     /locus_tag="VEV83_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK44164.1"
                     /translation="MNKHFLFRLASASIVVVVACISFSFGKRSQQQAYILEHEKDIAQ
                     TQPGPHNGGGESIAYGFFSKAENLNLVFRKRVLQPGSAIGYHLQTQDEIYYIVSGEGM
                     MKMNNETFAVHAGDAILTRPGSSHGLIQTGKENLVVIVNYGKQ"
     gene            complement(771..1148)
                     /locus_tag="VEV83_03295"
     CDS             complement(771..1148)
                     /locus_tag="VEV83_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK44165.1"
                     /translation="MPNDKQPTIGHGKICYLEIPATDIAASANFYKQVFGWNIRTRGD
                     GATAFDDGVGEVSGSWVLNRKPSPEPGLLIYVMVDNVAATVDAVIQAGGIIVQPVGAD
                     APEITARFKDPAGNVLGLYQEPG"
     gene            complement(1166..1591)
                     /locus_tag="VEV83_03300"
     CDS             complement(1166..1591)
                     /locus_tag="VEV83_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK44166.1"
                     /translation="MAALNPYLNFNGNAEEAFNFYKSIFGGDFAAVIRFDQMPGDQKP
                     APDEANKLMHIALPVGKGNMLMASDVPQAYPRAVAGTNYSISITADSEEEARKLFDGL
                     SEGGQVTMPLDKAFWGSLFGMLTDKFGVQWMMSYDYNRH"
     gene            complement(1627..2052)
                     /locus_tag="VEV83_03305"
     CDS             complement(1627..2052)
                     /locus_tag="VEV83_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44167.1"
                     /translation="MPDIYVIKDDIKVACIKAFSFPEGIGGAWAKLFSSLPSQEGRKL
                     YGISYGGDNGNITYLAAVEELHEGEADQLGLESFVVRNGEYVSEFLENWRSDETQIAK
                     TFRELLKDPRIDRKEGYCVEMYLNSKDVLCLVKVDPSNT"
     gene            complement(2064..>2410)
                     /locus_tag="VEV83_03310"
     CDS             complement(2064..>2410)
                     /locus_tag="VEV83_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HYK44168.1"
                     /translation="AFPAATRRILQEVRQTIKKAAPQAEEVISYNMPAFKLHGVLVYY
                     AGYQKHIGFYPTPSAIKAFQKELAQYESSKGAVQFPIDEPMPVELITKIVQFRVRENL
                     AKEKAGKQTKSK"
BASE COUNT          663 a          560 c          536 g          651 t
ORIGIN      
        1 tcagcgaaga taagcttaca aaggccggcg gttacagata tattaaagca aggcggcctg
       61 aattgtacag agacatcatc ggcaagccgc ataaatctga acaaaaagta gtgtggctga
      121 atatggaatg aagcgttgcc agaaagagtc gcggaaacat gaatgcaggg gcggaaagtg
      181 acaaatacaa aacggcgata gacacaaaag ttcatcgtca tttcgagtga caacgagaga
      241 tctcagggta tacaacacat ttcatccaac aaaaacactc tgaatgaaca aacatttcct
      301 tttccgcctt gcaagtgcat caatagtcgt cgttgttgcg tgcatttcat tttcgtttgg
      361 caaaagatcg cagcaacaag cctatatact cgagcacgaa aaagatattg cgcaaactca
      421 accggggcca cataacggcg gtggcgaaag catagcttat ggtttttttt caaaggcgga
      481 aaacttaaat cttgtgttca gaaagcgcgt actgcagccc ggcagtgcga tcgggtatca
      541 tctccaaaca caggatgaga tctattacat cgtaagtggc gagggaatga tgaagatgaa
      601 taacgaaacc tttgctgtgc atgcaggcga tgcgatcctt acccggccgg gcagttcgca
      661 tggattaata caaacgggaa aagagaacct ggttgtaatc gtaaattacg ggaagcagtg
      721 acaacttttg atggccttca cttgccctaa gtgtaagatt tgatattgca ttaaccgggc
      781 tcctggtaaa ggccaagcac attgcctgca ggatccttga atctcgctgt gatctccggt
      841 gcatcagcac ctacgggctg cacgatgata ccgccagcct gaatcacggc atcaacagtt
      901 gccgcaacat tatcaaccat gacataaata agtaggcctg gttccggtga tggcttacga
      961 ttcagcaccc acgaaccgct cacctcgcca acaccgtcgt caaatgcagt agcgccgtct
     1021 ccgcgggttc tgatgttcca gccgaaaacc tgtttataaa aattcgcaga tgcggcgatg
     1081 tcagtagccg gaatttcaag ataacagatt ttaccgtgtc cgatcgttgg ctgcttgtcg
     1141 ttaggcatat tgatcagata gtttattaat gacgattata atcatagctc atcatccact
     1201 gaaccccaaa tttgtcggtg agcattccga acagtgaccc ccagaatgcc ttgtctaaag
     1261 gcattgtcac ctggccgcct tcggaaagtc cgtcaaacag tttcctggct tcttcttcac
     1321 tgtctgcggt gatcgaaatg ctgtaattag tacctgcaac ggctcgcgga tatgcctgcg
     1381 gcacgtcgct ggccatgagc atattgcctt ttccgacagg caaagcgatg tgcattaatt
     1441 tgttggcttc gtcaggagct ggtttctggt ccccgggcat ctggtcgaag cgtatcaccg
     1501 cagcgaagtc gccgccaaaa atcgatttgt aaaaattgaa cgcttcctct gcgttaccat
     1561 taaaattcaa ataaggatta agtgcagcca tgtgtgtaat tttgaaagtt aagaatgaat
     1621 atctgatcag gtgtttgaag gatcaacttt tacgaggcat agaacatctt ttgagttaag
     1681 atacatttca acgcaataac cttctttcct gtcaattcgc ggatctttca acagctcacg
     1741 gaaagttttt gcgatctgtg tttcgtcgct acgccaattt tctaaaaatt cacttacata
     1801 ttcaccgttt cgaacaacaa aactttccag tccaagttga tctgcctcgc cttcatgcaa
     1861 ctcttcaacc gcggccagat aagttatgtt tccgttgtca ccgccgtaag aaattccgta
     1921 caactttctt ccttcctgtg aaggcaaaga agaaaatagc ttagcccacg caccgccgat
     1981 gccttccggg aatgaaaagg cctttataca cgcaactttg atatcatctt ttataacata
     2041 aatgtccggc atattcagta ttcttatttc gatttagttt gctttccggc tttttctttc
     2101 gcgaggtttt cgcgaactct gaactgtacg atctttgtga tcaattcaac gggcatgggc
     2161 tcgtcgatgg gaaattgaac ggcccctttt gaactttcat attgcgctag ctccttttga
     2221 aatgctttta tagcagatgg tgttggataa aagccaatat gtttttgata accggcataa
     2281 taaacaagca cgccatgcaa tttaaacgca ggcatgttat agctgataac ttcttccgct
     2341 tgcggagcgg ctttcttaat tgtttgccgc acctcctgta atatcctcct ggttgctgcc
     2401 ggaaaagcgg
//
LOCUS       DASQJI010000105         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_776005,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000105 DASQJI010000000
VERSION     DASQJI010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776005"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VEV83_03315"
     CDS             complement(<1..190)
                     /locus_tag="VEV83_03315"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HYK44169.1"
                     /translation="MQETYIDNKTFVKDDFIAKPFKRGEYEKCVFNQCDLSNNDLSEC
                     KFIDCEFSSCNLTMAKIDN"
     gene            complement(243..1526)
                     /locus_tag="VEV83_03320"
     CDS             complement(243..1526)
                     /locus_tag="VEV83_03320"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYK44170.1"
                     /translation="MTLFYTAANSQTEIMTWQDGKKGAVSLTYDDGSINQFKYALPVM
                     KRLNLPATFYIITGPIPGSKYPGKFIGRPVSDIISETATVPTNADNYFERASAAKYLG
                     YTGANAYYDSSAILFEDGNEAQSYVVMDSLYSKVRNGSLKKGIELSMEVAQEAGLTWD
                     SIKAYAAEGYEFASHTITHAHMTVLDTANMFYELEKSKEDIRDHLGDQYTFTAEIPFG
                     IEHPRAMKYALPAYPALRNMMTDPYLEEINRGYKTQPGSSTKEYVQWQRGPVSKTSLQ
                     TMQSWVDTTLAHHNIWLVLVFHGVDNLGYEPLSHELLDTYFQYIKKHGNDLWIATFSE
                     VAKYMRERMNTSLKTEKAGEKIVIHMEPSLDTSVYNVPLTLKTYIPAAWKRVQVKQGV
                     RSERAEAQKDNKGSYIFLHAQPNASTIELSASNGN"
     gene            1787..>2115
                     /locus_tag="VEV83_03325"
     CDS             1787..>2115
                     /locus_tag="VEV83_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44171.1"
                     /translation="MNIDKTNITTPKAMADEEGISALCDKYYHGLKNKDVISKLYFEE
                     RVSIAHELVSEAKERGIYLYRREVDGSAQQHDAVSGALVNLASNDYLGFAKHSLIADA
                     AIEGIAE"
BASE COUNT          530 a          450 c          468 g          667 t
ORIGIN      
        1 tgttgtcaat ttttgccatc gttaaattgc agctactgaa ttcgcaatcg atgaatttgc
       61 attcagaaag gtcgttgttt gaaagatcgc actgattgaa aacacatttt tcgtattcgc
      121 cgcgtttgaa cggttttgca ataaagtcgt cttttacaaa agttttgttg tcgatataag
      181 tttcctgcat tttgttttgg aagtttgtta ttgcttatca gcgaatggaa gaaacgactc
      241 tttcaatttc catttgaggc agacaactca attgttgacg cattcggttg ggcatgtaaa
      301 aagatataac tgcctttgtt gtctttttgt gcctctgccc gttcacttcg tacaccttgt
      361 ttcacttgta ctcttttcca tgctgcgggg atataagtct ttaatgtaag cggaacgttg
      421 tacacactcg tatcgagcga aggctccata tgaataacga ttttctcacc ggctttttct
      481 gtttttaaag aggtattcat tcgttcccgc atatactttg ccacctcact gaaagtggct
      541 atccacagat catttccatg cttttttatg tattgaaaat acgtgtcgag taattcatgc
      601 gacaatggct cgtatcccag gttgtctacg ccatggaata caagcaccag ccaaatgttg
      661 tgatgcgcga gcgtcgtgtc aacccacgac tgcatcgttt gcaaagaagt ttttgaaacc
      721 gggcctcgtt gccactgaac atattccttt gttgacgagc cgggttgcgt tttgtagccg
      781 cgattgatct cttccagata cggatccgtc atcatgttgc gcaaagcagg ataggccgga
      841 agtgcatatt tcatggcgcg tggatgctcg atgccaaaag gtatttcggc tgtgaaagtg
      901 tattgatccc ccagatgatc cctgatatct tctttgcttt tctcgagctc ataaaacata
      961 tttgcggtat caagcacggt catgtgcgca tgcgtgatcg tgtggctcgc aaattcgtag
     1021 ccttccgctg cgtatgcttt gatgctgtcc caggtgagcc cggcttcctg cgctacttcc
     1081 atacttaatt cgattccttt ttttagagat ccgtttctca ctttgctata caatgaatcc
     1141 atcactacat atgattgcgc ttcgttcccg tcttcgaaaa gaattgcact gctatcataa
     1201 tatgcatttg ctcctgtgta tcccaaatat tttgctgctg aagctcgttc gaaatagttg
     1261 tcagcatttg ttggaaccgt tgcagtttca ctaattatgt cactcaccgg ccggccgatg
     1321 aattttcccg ggtacttcga gcctgggatc ggcccggtga tgatataaaa cgttgcgggc
     1381 aggtttagtc gcttcatcac cggaagcgcg tacttaaatt gattgatcga gccatcatca
     1441 tacgttaatg aaacggcacc tttcttaccg tcctgccagg tcatgatctc ggtctggctg
     1501 tttgcggcag tgtaaaaaag agtcaaagtc aaaattgtgc aacataatct gtccatggtt
     1561 taaagatagc ataatcattt ttcagttaca ttacgtgaga acagcgtttg tcataccgga
     1621 acgaaagaga aattaatgtt tcggtatcgg catatatttt ttaaattcgg catatcgatc
     1681 gtttaattgt ttgatcaaat aaccattact tgtagcagat gatcattact accaaaaata
     1741 atttgttgag aaagccttgc ctcgttcacc tgattatacc cggctcatga acattgacaa
     1801 aacgaatatc acgacgccga aagcgatggc tgatgaggaa ggtatctcgg cgctttgtga
     1861 taaatattac catggcctga aaaataagga tgttatttca aagctgtatt tcgaagagcg
     1921 tgtatcgatc gcacatgagt tagtcagcga ggcgaaagaa agaggtatat atctttatcg
     1981 cagagaggtt gatgggtcgg cgcaacagca tgatgccgtg tcaggcgcgc ttgttaatct
     2041 cgcttccaat gattacctcg ggtttgcgaa gcactcgtta attgcggatg cagcaattga
     2101 aggcatcgcg gagtt
//
LOCUS       DASQJI010000106         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_622366,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000106 DASQJI010000000
VERSION     DASQJI010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622366"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VEV83_03330"
     CDS             complement(<1..267)
                     /locus_tag="VEV83_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44172.1"
                     /translation="MKSRTPIKRNAAIVELSKDHHFGLLLVWKTREGLKRSIEPERIG
                     RYIIHFFETELKTHFKEEEELLFVEVPQDNKLRMQAEAEHKNIYE"
     gene            complement(459..788)
                     /locus_tag="VEV83_03335"
     CDS             complement(459..788)
                     /locus_tag="VEV83_03335"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK44173.1"
                     /translation="MTDQSPSEVTPFMPAESIDYADGSVVSKMITRKPGGNITLFAFD
                     KGEELAEHSSSHDALVQVLDGVAEITIGGNLSRVERGYCILLPANIPHALKATEKFKM
                     MLTMIKS"
     gene            880..1437
                     /locus_tag="VEV83_03340"
     CDS             880..1437
                     /locus_tag="VEV83_03340"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HYK44174.1"
                     /translation="MHRRNVIKGLGAITLYSSFPAIVSEFLSSCQTKNKTSRAGFFTE
                     EEFHMIEDISDVLIPATGTAGALQVQVPYFIDLVVKNCMNNNDQQMIKKGLQQLNEQS
                     KFSSLSSKEKLEAVKKTDEAAFKDSSDQAWFRIIKKVALIGYFTSQEGMTTALNYVKV
                     PGDYNACIPYKEGDKALAKTFLMYW"
     gene            1509..>2225
                     /locus_tag="VEV83_03345"
     CDS             1509..>2225
                     /locus_tag="VEV83_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK44175.1"
                     /translation="MNTYDAIVVGSGISGGWAAKELTEKGLKTLVLERGRDVKHVTDY
                     TTANLDPWELPNRNMLTQEDLHNYPVQSTVYHFGQDDKHFFLKDSEHPYNQAKPFLWI
                     QGNQTGGKSLLWSRHTFRFSDIDFNANLEEGVGIDWPIRYKDIAPWYDYVERFIGVSG
                     KNEGLPQLPDGQFIPPFEMNCLEKHLKQTIQEKFHERNLIQSRMAVLTQPHNGRGKCM
                     ARNLCHRGCPYGAYFSSNSST"
BASE COUNT          667 a          476 c          462 g          620 t
ORIGIN      
        1 ctcataaata tttttatgct ctgcttcggc ctgcattctg agtttattgt cttgcggaac
       61 ttcaacgaac agcaactcct cttcttcttt aaaatgcgtt ttcaattccg tttcgaaaaa
      121 atgaataatg tagcggccga tcctttccgg ttcaattgat ctcttcaaac cttccctcgt
      181 tttccaaaca agcaacaaac caaaatggtg gtcttttgag agctctacaa ttgctgcgtt
      241 gcgtttgatc ggcgttctgc ttttcattta gttcgtttca atctctgact ttgacgagtt
      301 atgcgattaa aattaaaggt tccatgaatc ttactgaaac ttagtgccct cgtgtctttg
      361 tggttttcag aatttctttt taaaccgcga ggtcttgaag gcacgacgac acactaagga
      421 aaatgagctg gcagttttca accaatagca cgaacaactt aacttttaat cattgtcagc
      481 atcattttaa atttttccgt tgctttaaga gcgtgcggaa tgtttgccgg aagtaaaatg
      541 cagtatccgc gctcaacacg agataggttt ccgccgattg taatttctgc tacaccgtcg
      601 agaacctgca cgagcgcgtc atgcgaagag ctgtgttccg caagctcttc gcctttgtcg
      661 aaagcaaaca gcgtaatatt tccgcctggt ttcctggtga tcattttgct aaccactgaa
      721 ccatccgcat aatcgatcga ttcggctggc ataaatggtg ttacttctga aggagactga
      781 tctgtcattt acgtaatatt agactgttta tccttttgaa aaaaatttct cgcagacgtt
      841 ttctttaaac aattactttt aaaaccaaaa ccattattca tgcatcgccg caatgtgatc
      901 aagggcctgg gtgctataac gttgtacagc agttttccgg ccattgtttc cgaatttctt
      961 tcttcctgtc aaacaaaaaa caaaacatcc agagcgggat tctttactga agaagaattt
     1021 catatgatcg aagacataag cgatgtcctg atacccgcca ccggtacagc gggtgcatta
     1081 caggtacagg tgccatactt cattgacctc gtcgttaaaa actgcatgaa taataatgat
     1141 cagcaaatga tcaaaaaagg tcttcagcaa ttgaatgaac aatcaaaatt ttcgtccctt
     1201 tcttcaaaag aaaaactgga agctgtaaag aaaacagatg aagctgcatt taaagacagt
     1261 agcgaccagg catggttccg gatcataaaa aaagtcgcat tgatcggcta cttcacatca
     1321 caggaaggaa tgacaacagc attgaactat gtaaaagtac cgggcgatta taacgcatgc
     1381 attccatata aagaaggcga taaagcgctc gcaaaaacat ttcttatgta ttggtaaaga
     1441 tgtgcatggg caatggcaga ttcaattcgg accgcgattt aaaaaatcat tctttcaaaa
     1501 aataaaatat gaatacgtac gatgcgatcg tagttggatc tggaatttcg ggcggatggg
     1561 ccgcaaaaga acttactgag aaaggactga agacattggt gcttgaacgt ggtcgtgatg
     1621 taaaacatgt tacagattac acgaccgcaa atctggatcc atgggagctg ccgaaccgga
     1681 acatgttaac acaagaagat ctgcacaatt accccgttca aagtacagtg taccatttcg
     1741 ggcaggatga taagcatttc ttcttaaaag acagcgagca tccgtacaac caggccaagc
     1801 cttttctatg gatacaaggc aatcagacgg gtggcaaatc tttattgtgg tcgcgacaca
     1861 cgttccggtt tagcgatatt gacttcaatg caaacctcga ggaaggtgtt ggcatcgatt
     1921 ggcccattcg ttataaagat attgctccat ggtacgacta tgttgaacgt ttcatcggtg
     1981 ttagcggaaa gaatgagggg ctgccacaac ttcccgatgg ccaatttatt ccaccattcg
     2041 aaatgaactg cctcgaaaaa catttgaagc aaacgattca agaaaaattc cacgaaagaa
     2101 atttaattca gagcagaatg gctgtgctca cacaaccgca caacggaaga gggaaatgta
     2161 tggcgagaaa tctttgtcac cgcggctgtc cctacggcgc ttatttcagc agcaattcgt
     2221 cgact
//
LOCUS       DASQJI010000107         6719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_8133, whole
            genome shotgun sequence.
ACCESSION   DASQJI010000107 DASQJI010000000
VERSION     DASQJI010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6719
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8133"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..982
                     /locus_tag="VEV83_03350"
     CDS             173..982
                     /locus_tag="VEV83_03350"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HYK44176.1"
                     /translation="MNQFKEACDYLLSNGIEAPEVWVVLGTGLHKLLEHVEDQKIIPY
                     SSIPHFPLSTVESHKGNLVYGSIKGKRVLLMQGRFHFYEGYDLQQVVFPVRVMRLLGV
                     KNLFLTNAAGGINLSFKKGDLVLINDHINLQNGNPLAGKNFDDLGPRFPDMSQPYAPQ
                     LMNTLLQNAVQLNVELKQGVYAAVNGPNLETKAEYRYLKIIGADMVGMSTVPEVIACN
                     HMQLPCAAISVITDECDPDNLKPVAIEEIIATAVKADDKLAMLLSETIIGL"
     gene            1305..1700
                     /locus_tag="VEV83_03355"
     CDS             1305..1700
                     /locus_tag="VEV83_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HYK44177.1"
                     /translation="MLSAGSMTLNDLTYKIRGAIFSVHNELGPGLLESVYEAALFYEL
                     TSLGLCVTSQTGLPVFYKTVTLDLGFRLDLLVENKIIIEIKSVECLHEIHKKCLLNYL
                     KLADKKLGILVNFNVVKLVDKESLIRIIN"
     gene            complement(1737..3146)
                     /gene="lpdA"
                     /locus_tag="VEV83_03360"
     CDS             complement(1737..3146)
                     /gene="lpdA"
                     /locus_tag="VEV83_03360"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HYK44178.1"
                     /translation="MAYDVIVIGSGPGGYPAAIRASQLGFKTAIIERESLGGICLNWG
                     CIPTKALLKSAQVFDYMKHAGNYGLSASEVKQDFSAVIKRSRGVADKMSKGVAYLMKK
                     NKIDVIMGTAKIVSKGKIEVVAADNSKQTVEAKYIIVATGGRSRELPNLKQDGKKIIG
                     YREAMVLPQQPKSMIVVGSGAIGSEFAYFYNSMGTKVTIVEFMPRIVPVEDEEVSKEL
                     EKQYKKQGIEIMTSATVEAADTSGNGVKATVKKQDGSTVTIEADILLSSVGVVANVEN
                     IGLEAAGIKTEKGKIVVDKYLQTNVPGFYAIGDCTPNQALAHKASREGIVAAEHIAYV
                     EKKSSHLPEPLDYGNIPGCTYCVPEVSSVGMTEKAAKDAGMEIKVGKFPFQASGKATA
                     ASATEGFVKVIYDAKYGELLGAHMIGFNVTELIAEVVTARKLETTGHEILTAVHPHPT
                     MSEAVKEATAVAYGEATDI"
     gene            3873..4181
                     /locus_tag="VEV83_03365"
     CDS             3873..4181
                     /locus_tag="VEV83_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44179.1"
                     /translation="MKNGTFKYLDIEDTSAYIIIKDTVHTEYHNDGKYYIRSKLTWIN
                     NCEYIMTMTAITIPNFPFHPGDKMEVQVTKIEDGIIYYNSIVNNKKWPGRLRILTGGK
                     "
     gene            4254..5684
                     /locus_tag="VEV83_03370"
     CDS             4254..5684
                     /locus_tag="VEV83_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose isomerase"
                     /protein_id="HYK44180.1"
                     /translation="MDDVELKIGLFGIGLEAYWPQFDGLKQRLEGYLRLVEEKLTVVN
                     CGVINAGLVDNVDKAFAAGKLFRQEDVDVIFLHVTTYALSSTVLPVVQRSKTPVIILN
                     LSPEPAIDYDAFNAMSDRTAMTGEWLAHCSPCAVPEIANVFRRTGINFYQVTGILNED
                     DACWNEITEWIEAAKVMHTMQYNRLGCLGHYYSGMLDIYTDLTQLYAHFAGHIELLEV
                     EELVAFRKEVTDEEKKDRLQLFHETFAIDVECKQEDLVSAAITSVALDGLVKKYKLGS
                     LAYYYKGTGNAENEDAIASIIPGNSLLTARGIPVAGEYEIKNVQAMKIMDTFGAGGSF
                     TEYYAMDFKDDVVLMGHDGPGHIAIAEGKTKLRPLQVYHGKVGKGLSVEMSVKHGPVT
                     LLSVVEKRDGGFIFLVAEGESVTGPILQIGNTNSRYRFPLGARRFVNEWNVHGPAHHC
                     AVGIGHIASKIQKLGKLLHIEAVIVC"
     gene            complement(5733..>6719)
                     /locus_tag="VEV83_03375"
     CDS             complement(5733..>6719)
                     /locus_tag="VEV83_03375"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HYK44181.1"
                     /translation="CLLFLSLFLFEFNTMNKDEKSNTHSAKYELIRGWLQFPKDFHTG
                     QVAGVSVDKNQNVVFFQRTDREWTGQFPDSLISSNTIFLVDKETGRILNGWGANLFIM
                     PHGLTVDNDDNIWVTDVALQQVFKFSHDGQLLMKLGVPKTPGDDSAHFNLPTDVAVAR
                     DGSFYVSDGYENSRIVNFSKEGNYLFEWGKKGTGPGEFNIPHSISLDSRGNVYVADRE
                     NNRIQKFDGNGKFLVEWKNDEATNLFAVSVSRADKIFAVDNLYVNDSLPMGDDVLQFD
                     ANLDLQMRFGRNDSSIDGNSLYHDIAVDDQENIYVADVGRSRIEKFKKVRNN"
BASE COUNT         1870 a         1497 c         1448 g         1904 t
ORIGIN      
        1 gtcacgaagc gtcaaaaagt ataatggtct cgtcgctcac tggatcatca atttttgatg
       61 cctcaacaca atcagtttct cgtttgtcat ttagaacgat cgctttacat tgcgaaaatc
      121 aaacacccgg gcttaaaaaa aatcatcaca tttgcgtgaa cactatctgc acatgaacca
      181 gtttaaagaa gcctgcgatt atttactgtc aaacggaatt gaagcacctg aggtgtgggt
      241 tgtgctcggc accggtttgc ataaattatt agaacacgtg gaagatcaaa agatcattcc
      301 ttattcatct attccccatt tcccgctatc aacggttgag tctcataaag gaaatttggt
      361 gtatggcagc atcaaaggaa aacgtgtgct gctcatgcag ggccgatttc atttctatga
      421 agggtatgat ctgcagcagg ttgttttccc agtgcgtgta atgagattgc ttggcgttaa
      481 gaatcttttt ctcacaaacg cagccggtgg catcaatctc agtttcaaga aaggagacct
      541 ggtcttaata aacgatcata tcaacctgca aaacggaaat cccctcgccg gaaaaaattt
      601 tgatgacctg ggtccgcgct tcccggatat gagtcaaccg tacgcacctc aactaatgaa
      661 cacgctattg caaaacgcgg ttcagttaaa cgtcgaatta aagcaaggtg tgtacgctgc
      721 cgtgaatggt ccgaatctcg aaacaaaagc agagtatcgc tacctaaaaa ttattggcgc
      781 cgatatggtt ggcatgtcaa ccgtacccga agtgatcgcc tgcaaccaca tgcagttgcc
      841 ttgtgccgct atttcagtga tcacggatga atgcgatccc gataacctca agcctgttgc
      901 tatcgaagag attatcgcaa cggctgttaa ggctgatgat aagcttgcaa tgctattgag
      961 cgagacgatc attggattgt agtctcacag atgccacgga tgagcacaga tgtttgtttt
     1021 tgcacgacgg ttgtcaaaca catgtctcaa tttgaaattt ctgtgtccat ctgtgttatt
     1081 ctgagcaaat tctaaatcag gctgtcacgg atgccaccgc taagcagaga taatctttta
     1141 tttcagaaag ttattaaacc catctattaa tttgaagttt ctgtttcgat ctgtgagcaa
     1201 atcttaaatc aagatctcac agatggcacg gatgcgcgca gatatttgtt gtttcaaccc
     1261 aaccgttaaa ctgttcttcc tgaaagaaaa ttctgcgtat atctgtgtta tctgcaggat
     1321 cgatgacttt aaacgatcta acatataaaa ttcgcggcgc gatattttcg gttcataatg
     1381 aattaggacc tggtttattg gaaagtgtgt atgaagcagc gttgttctac gagttaacgt
     1441 cgctcggatt gtgtgtcaca tcccaaacgg ggttgcctgt gttttacaaa actgtaacgt
     1501 tagatcttgg gtttagactc gatttactag tggagaataa aattataatc gaaataaagt
     1561 cagtcgagtg cctgcatgaa atacacaaaa aatgcctgct caattactta aaacttgctg
     1621 ataaaaaatt gggtattctt gtaaatttca atgtcgttaa actggtcgac aaagaaagtt
     1681 tgattcgcat catcaactaa tctgtgcata tctgtgatat ctgtgagaaa catcacctaa
     1741 atgtctgtcg cctccccgta cgcaaccgcc gttgcttcct tcaccgcttc actcatcgtg
     1801 ggatgcggat gtacggcagt cagaatttcg tggccggtgg tttccagctt gcgtgcagta
     1861 accacttctg ctatcaactc cgttacgtta aatccgatca tgtgtgcgcc aagcagctct
     1921 ccgtattttg catcgtagat cacttttaca aaaccctccg ttgcgctggc cgcagtcgcc
     1981 ttcccgcttg cctggaacgg aaattttcca actttaattt ccatgcccgc atctttcgct
     2041 gctttttccg tcatgcccac gcttgaaact tcaggaacac agtacgtgca tcccgggatg
     2101 tttccataat ccaatggctc aggtaaatga gacgatttct tttcaacgta tgcgatatgt
     2161 tctgcagcaa caattccttc acgacttgct ttgtgtgcga gtgcctggtt tggcgtgcag
     2221 tcgccgatag catagaatcc cggcacattc gtctgcaaat atttgtcaac cacgatcttt
     2281 cctttttcag tttttatgcc cgcagcttcg agaccaatat tttccacgtt ggcaacaaca
     2341 ccgacagagc ttaacaaaat atctgcttca atggttaccg tgctgccatc ctgttttttc
     2401 actgttgcct taacaccgtt gcctgacgtg tcagccgcct caacggttgc gctcgtcatg
     2461 atctcaatgc cctgcttctt gtactgcttt tccagttcct tggatacttc ttcgtcttct
     2521 accggcacaa tgcgcggcat gaattcgaca atagtcactt ttgttcccat gctgttgtag
     2581 aagtacgcaa attcagaacc tattgcgccg ctgcccacga cgatcatgct ttttggttgc
     2641 tgcggcagga ccatcgcctc acgataaccg ataatttttt taccatcctg tttcaaattc
     2701 ggtagttccc ggctgcggcc accggtggcg acaataatgt attttgcttc aacagtttgt
     2761 ttggagttat cagcagcgac gacttctatt tttcccttag aaacgatctt cgcagttccc
     2821 atgatcacat cgatcttatt ttttttcatc aggtaggcaa cgcctttgct cattttgtcg
     2881 gctacgccgc ggctgcgttt gatgaccgca ctaaaatcct gtttcacctc cgaggcagac
     2941 aacccatagt tgccggcgtg cttcatgtag tcaaacactt gcgcactttt cagcaaagct
     3001 ttcgtgggaa tgcaacccca gttaaggcag atgccgccca ggctttctct ttcaatgatc
     3061 gccgttttaa accctagttg tgatgcgcgg atagctgcag ggtaaccacc cggaccactg
     3121 ccaataacaa ttacgtcgta tgccatgatg attgcagatt tttagatttc agattgccat
     3181 tctttgaaca aacggaatct taaagctgcg aaaatagttt gtaaaagcca attgggcaat
     3241 taatgggcgt tcatagatat tcttatgacc ggaccgcaag ttctcccgca ttttccggat
     3301 atgcggacat cttaaattta aagcattaag gttaaagcaa acagatgtcc acctgaataa
     3361 aacaaaacgc aattgcacaa tccgtttctt cgcggggatg acgtgaagag gttgattgtt
     3421 ctcttgccta atgcggctga gcaaatgcaa ccaagttgac gtcatgccgg aagtaaatca
     3481 tcatttttgt gggctgtcga ctaatatcat tgctcatctt ttgttccggc tatacgctgc
     3541 tacttcgcca caaacctgcg cacggagcat cagcggggta tccgctgcta tccggcagcc
     3601 attcaactgt tgaatagaaa tcaacaagcg tttacaccac cggatgacgg aattcttcct
     3661 gggcaacaaa tgttatcttt ccaccggatg atgtggcacg gcaacaacaa aaaacacaca
     3721 gtcacaaata tttttcaagg gcgcaatttc aaacagcaga gattcactaa aaaatttgca
     3781 cgtcaatgaa accttataga tgtttaagtt gcttattgtt cttaatcact tcggcggcct
     3841 tttctcaaaa ttcgaaaacg gattgtggtg tattgaaaaa cggaacgttc aaatacctgg
     3901 acattgaaga tacgtcagca tatatcatca ttaaagacac ggttcatacg gaatatcata
     3961 atgacgggaa gtattatatc cggtcaaaat taacctggat aaataactgc gaatatatca
     4021 tgaccatgac agccattacc attccaaatt tcccgtttca tcccggcgat aaaatggaag
     4081 tccaggtaac taaaatagag gacggcataa tttattacaa ctcgattgtc aataataaga
     4141 agtggccggg aagattgcga attctgacag gtgggaaata aaatgctgca atgttgcaag
     4201 ccgtcacttc cgcatctacc ctggatgaaa tctaaaaatc gatactttta tttatggatg
     4261 atgtggaatt aaaaatcggc ttgtttggta tcggactcga ggcatactgg ccccagtttg
     4321 atggattgaa acaacggctg gaaggttatc tgagactagt tgaagaaaaa ttaaccgttg
     4381 taaattgtgg tgtgatcaac gccggtcttg tcgacaatgt cgacaaagcg tttgccgctg
     4441 ggaaattatt caggcaggaa gacgtcgacg tcatttttct tcatgtgacc acgtatgcgt
     4501 tgtcgtcaac ggtgttgccg gtagtacaaa gatcaaagac gcctgtcatt attttgaatc
     4561 tttctcctga gccggctatc gattatgatg cgttcaacgc aatgagcgac cgcacggcga
     4621 tgactggcga atggctcgcg cactgctcac catgcgcggt tccggagatt gcaaatgttt
     4681 ttaggagaac aggaataaat ttttaccagg ttactggcat cttaaacgaa gatgatgcat
     4741 gctggaatga aataacggaa tggatagaag cggcgaaggt gatgcacacg atgcaataca
     4801 accggctcgg ttgtctcggg cattattata gcggcatgct tgacatttat acagatctta
     4861 ctcaactata tgcacatttt gcgggccata ttgaattgct ggaagtggaa gaactagtcg
     4921 cattccgtaa agaagtgact gacgaagaaa aaaaagaccg cctgcaactc tttcatgaaa
     4981 catttgctat agacgttgaa tgcaaacagg aggatttagt aagtgcagcg atcacgtccg
     5041 ttgcacttga cgggctagtg aaaaagtata agcttggttc actggcatat tattacaaag
     5101 ggaccggtaa tgcggaaaac gaagacgcga tcgcctcaat aattcccggt aattcgctgt
     5161 tgactgcgag gggcattccg gttgcaggtg aatacgaaat aaagaatgtc caggctatga
     5221 agatcatgga cacttttggt gcaggtggct ctttcactga atactatgcg atggatttca
     5281 aagatgatgt ggtcttaatg ggacatgatg gtcccggcca catcgcgatt gccgaaggca
     5341 aaacgaaact gaggccttta caagtctatc acggaaaagt tggcaaggga ctgtcagtgg
     5401 aaatgtctgt caaacatgga cccgttacgc tattgagtgt tgttgaaaaa agagatggcg
     5461 gtttcatatt ccttgtcgca gagggagaat cggtgacagg gccgatactt caaattggca
     5521 acacaaacag ccgctataga tttccgttgg gtgcaagaag atttgtaaat gagtggaacg
     5581 ttcacgggcc tgcgcatcat tgcgctgttg gcatcggaca tatcgcatca aaaattcaga
     5641 aactcgggaa gctgttgcac atagaggcgg taatagtttg ctgaaagaaa ttggtcgtta
     5701 tgcagccggt ctacgaaata agatggcctg tattaattgt tgcgcacctt cttaaatttt
     5761 tcgattcttg aacgcccaac atctgctaca tagatatttt cttgatcgtc tacggcaata
     5821 tcatgataca aggaatttcc gtcaattgat gagtcattcc gtccaaaacg catttgcaga
     5881 tccaggtttg catcaaattg cagaacgtcg tcgcccatgg ggaggctatc atttacatat
     5941 aggttatcca cggcgaaaat cttatccgcc cggctaactg acacagcaaa taaattggtt
     6001 gcttcatcat ttttccattc aaccaaaaac tttccgttgc catcgaattt ctggatacgg
     6061 ttattttccc tgtcagctac ataaacattt ccacgcgaat ccagggaaat gctatgcggt
     6121 atattaaatt caccggggcc tgtccctttc ttaccccatt caaaaagata atttccttcc
     6181 ttagaaaaat ttacaatgcg actgttttca taaccatcgc tcacataaaa agagccatca
     6241 cgcgccaccg caacatcggt gggaagattg aagtgagcag aatcatcgcc tggtgttttg
     6301 ggaacaccta atttcattaa taactgccca tcatggctga atttgaacac ctgttgaagt
     6361 gccacgtccg taacccagat attatcgtca ttatcaacag tgagtccgtg cggcatgatg
     6421 aacaaattcg cgccccaacc attcaatatt ctacccgttt ccttatcaac aagaaaaatg
     6481 gtattagacg agatcaaaga atcaggaaat tgtcccgtcc attctctgtc ggttctctga
     6541 aagaaaacaa cgttttgatt tttatcaaca ctaacacctg cgacctggcc tgtgtgaaaa
     6601 tcttttggga attgcaacca gccccttatt aattcatatt tggcggaatg cgtattgctt
     6661 ttttcatctt tgttcatggt attgaattcg aagagaaaca aactaagaaa taataagca
//
LOCUS       DASQJI010000108         5583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2311944,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000108 DASQJI010000000
VERSION     DASQJI010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5583
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2311944"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VEV83_03380"
     CDS             <1..438
                     /locus_tag="VEV83_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK44182.1"
                     /translation="VYECKEVDAKFIWLVRDLRAVTFSKLKRWQVNKRSDKGAYETML
                     DSYAYKKLCKAVLSCMDKQNTLKLRYEVVADEPQKALDTICSSFGLKKFAAPEVMELT
                     NDHTIAGTPGRFESKPIAADNSWRSFYEDKKLLSALGKMFNAL"
     gene            452..1207
                     /locus_tag="VEV83_03385"
     CDS             452..1207
                     /locus_tag="VEV83_03385"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF020604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK44183.1"
                     /translation="MNSHFFILTAPRSGSTVLTRTLDQHPEIFCAGELFHPGDEIYHP
                     EWHFPFWGTKKKKGISRKLFAIANYINGYLFAVKHIKKFYAARELNKNVRGFKLMVAH
                     IKDFPTVWNYMRQNRFKVIILTRRNTFKEALSSFRARQTGVFHSERHTEIMDQKVYVN
                     AALLKNRVDELEAINRSILDVTNGMDKLVIEYEDLDDWQNTLNKVFSFLDVDRIDMQP
                     VLTKTSSNDWRDGVENFKEVEDLLQTTYPHHLE"
     gene            1231..1992
                     /locus_tag="VEV83_03390"
     CDS             1231..1992
                     /locus_tag="VEV83_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK44184.1"
                     /translation="MGTTKFVIFTLPRTGSTLLSKSLNKHPEIFCDDEIFHFSFRDYF
                     SPHQFRFWKFKFVSKKINYVINYPRTFFILKTYLDDFFTNASTENFRARGFKLMYYQT
                     FYTPGLLSYLTRNHIKVILLIRENVFRNAISDLRARATGIYHYQDDGEPSQPLSKLLV
                     DTNALQGKMQHIIDQNKKLEAIVSGMDHIKIRYEDLSDWDDAIRRITDFLGVSNVQVP
                     EAARKLNPESISDMIENVDEVRTWLQKNGYARFEN"
     gene            complement(2087..3250)
                     /gene="sat"
                     /locus_tag="VEV83_03395"
     CDS             complement(2087..3250)
                     /gene="sat"
                     /locus_tag="VEV83_03395"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF003166.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HYK44185.1"
                     /translation="MNQPHGGVLVNRIATGARQQELEEKAQGLFQLTIEDRYGADVEM
                     IAIGAFSPLTGFMGKADSESAIEKMQLTNGLAWGIPILLPAGDKYDEIKTGEEIALLD
                     KTGRVLAIMTVDEKFELDLANLSQKCFKTTEEKHPGVAAILRGGNKFIAGPLEMVNRP
                     LRKEDINEKYYLDPSETRAEFERRNWKTIVAFQTRNPIHRAHEYLIKCAQEIVDGALI
                     HPIVGETKSDDIPAPVRMKCYEALIENYFNPDNTKLSVLPTAMRYAGPREAINHTVIR
                     KNYGCTHMIIGRDHAGVGSYYGTYEAQELMDVQGPKIGMQILKFENTFWCKNTESMAS
                     SKTAPQNPDIVSLSGTKVREMLANGQRPPSEFSRPLVADILIEWATSKAEVPA"
     gene            complement(3277..3891)
                     /gene="cysC"
                     /locus_tag="VEV83_03400"
     CDS             complement(3277..3891)
                     /gene="cysC"
                     /locus_tag="VEV83_03400"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HYK44186.1"
                     /translation="MEATKNIVWHATTITKQDRHRMNGHKSAILWYTGLSGAGKSTLA
                     NKVEEKLFERGIHTYVLDGDNIRHGLNKGLGFSTEDRKENIRRIGEVSKLFVDAGAFV
                     STAFISPYREDRDMVRQLVNDGEFIEIFVNAPLDVCEERDPKGLYKKARAGEIRNFTG
                     IDDPYEAPENAELTIYTGEKSLEECALEVISYLESNGYMEEMES"
     gene            complement(3997..4524)
                     /locus_tag="VEV83_03405"
     CDS             complement(3997..4524)
                     /locus_tag="VEV83_03405"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK44187.1"
                     /translation="MNQVVIRQATASDAELIADLSRETFYNAFAPYNTKANMDKFMNE
                     VFTREKLIAEVAAPGNIFLLAFVGDEPAGYVRMRDKNLPEEPLGTDNIIEIARIYTAS
                     SEISKGIGSLMLKECVSTAKEMRRQYIWLGVWEKNDKAIRFYERHGFKTFGDHTFMLG
                     DDVQTDLLMARQVEL"
     gene            4630..>5583
                     /gene="dnaG"
                     /locus_tag="VEV83_03410"
     CDS             4630..>5583
                     /gene="dnaG"
                     /locus_tag="VEV83_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HYK44188.1"
                     /translation="MISPQTIEQITNRIDIIDVVTEFVKLKKRGANYLGLCPFHNEKT
                     PSFTVSPSKEIYKCFGCGKSGNAITFLMEHEKYSYIEALKWLAERYNVEIEETIVSDE
                     VKLQQQVAESLHALNNFAQKFFSEQLFSSEEGQNNALTYMEERGFGETIMKKFQIGYN
                     PQQRDHFSSAALKQQFSKDILLRSGLSVIRNDELVDNYRGRIIFPIHNTTGKIIGFGA
                     RVIGSMDKGPKYINTPENEIYVKSKILYGSYFARHAIDKNNECLLVEGYTDVISLHQA
                     GMENVVASGGTSLTADQLRLIKKYTNNLTIIYDGDTAGVKAA"
BASE COUNT         1533 a         1238 c         1233 g         1579 t
ORIGIN      
        1 gtgtatgaat gcaaagaggt tgatgccaaa ttcatctggc tggtacgcga cttgcgcgcg
       61 gttacatttt ctaaactaaa aaggtggcag gtgaataaac ggtctgacaa gggagcctat
      121 gaaacgatgc tcgacagcta tgcttacaaa aaattgtgca aggcagtgct cagttgtatg
      181 gacaaacaaa atacattgaa gctgcgttat gaagttgtcg ccgatgaacc tcaaaaagct
      241 ttagacacga tctgttcttc atttgggctc aagaaatttg cggcgcccga agtaatggag
      301 ttaacgaatg atcatacgat cgcgggcacc cccggcaggt ttgagagcaa accgattgca
      361 gccgataatt catggcgttc tttctatgaa gacaaaaagc tgttgagcgc acttggaaaa
      421 atgttcaatg cgctatgatc aaattaagct gatgaactcg cactttttta ttcttacggc
      481 accaagaagc gggtcaaccg ttttaacgcg cacattggac cagcatccgg aaattttttg
      541 cgccggcgaa ttgtttcacc ctggagacga gatctatcat cctgaatggc attttccgtt
      601 ttggggaacg aaaaagaaaa agggcatctc acgaaaactt tttgccatag caaactacat
      661 caatggttac ttgtttgcgg taaagcacat caaaaagttt tacgcggccc gggaactgaa
      721 taaaaacgtc cgcggcttca aactgatggt cgcacacata aaggattttc ctaccgtatg
      781 gaattatatg cgccagaatc gttttaaggt gatcattctt acaagaagaa atacgtttaa
      841 ggaagctctc tccagttttc gcgctagaca aaccggcgtc tttcattccg aacgtcatac
      901 agagatcatg gatcagaaag tgtatgtaaa cgcggctctg ctaaaaaacc gtgttgatga
      961 actcgaagct attaaccgct caattctcga tgtcaccaat ggcatggaca agcttgttat
     1021 tgagtatgaa gacctggacg actggcaaaa cacgctaaac aaagtttttt cttttctcga
     1081 tgttgaccgg atcgatatgc agccggtgct tacaaaaaca agctcaaatg actggcggga
     1141 cggcgtagag aattttaaag aagtagaaga tcttttgcaa acgacttatc cgcaccattt
     1201 agaatgatcg cctgaaattt ttacaaagtc atgggcacta ccaaatttgt gatatttacg
     1261 cttccgcgaa caggctctac attgttaagt aaatcgctta ataaacaccc cgaaattttt
     1321 tgcgacgacg agatctttca ttttagcttc cgcgattatt tcagcccaca ccaattccgg
     1381 ttttggaaat ttaaattcgt cagcaaaaaa ataaattacg tcatcaatta tccgagaacc
     1441 ttttttatac taaaaacata tttggatgat ttctttacca atgcatcgac tgaaaatttc
     1501 agggcgagag gttttaaatt gatgtactat caaacatttt acacgccagg cctgctgtct
     1561 tatctcacca gaaatcatat caaggtgatc ttgttgatcc gggaaaatgt gtttcgtaac
     1621 gccatttcag atctgcgtgc gcgggcaacc ggcatctacc attaccagga cgatggtgag
     1681 ccttcacagc cactttctaa actgcttgtt gatacaaatg cgttgcaagg gaaaatgcag
     1741 catatcatcg atcaaaataa gaagcttgag gccattgtgt ccggcatgga ccatatcaaa
     1801 attcgttacg aagatctttc cgattgggat gatgccatca ggcgcatcac agatttcctg
     1861 ggcgtttcaa acgtgcaggt tccggaggca gccaggaaat taaacccgga aagtattagc
     1921 gacatgatcg aaaatgttga tgaggtgaga acttggctgc aaaaaaacgg gtatgcaagg
     1981 tttgaaaact gaacgcgagt tatggcgttc ttaaaaattg gattatggca taaataaaga
     2041 aaaggtcgct ctttttgaac gaccttttcc ataaaaaaat tatttatcaa gcgggcactt
     2101 cggctttact cgttgcccat tcaattaata tatctgcaac caatggacgt gagaactctg
     2161 aaggaggtcg ttgtccatta gccagcatct ctcttacttt cgtgccactt agagaaacga
     2221 tgtcaggatt ctgtggcgcc gttttgctgc ttgccatgct ttccgtgttc ttacaccaga
     2281 aagtattttc gaatttcaat atctgcatac caatcttcgg tccctgcaca tccatcaatt
     2341 cctgtgcttc gtaggtaccg taatagcttc caacgccagc atggtcgcgg ccgatgatca
     2401 tatgtgtaca accgtaattt ttcctgatga ccgtgtgatt gatcgcttcg cgcggccctg
     2461 catagcgcat tgctgttggc aaaacactca gctttgtatt gtcaggattg aaataattct
     2521 ctatcaaggc ctcgtaacat ttcatacgca cgggtgcagg aatgtcgtcg ctctttgttt
     2581 ctccaacaat aggatgaatt aaagctccgt caacgatctc ctgcgcacac ttgatcaggt
     2641 attcgtgtgc gcggtgaatc ggattgcgcg tttgaaaagc aacgatcgtt ttccaatttc
     2701 gtctttcgaa ttcggctctt gtttcagaag gatcaagata atatttctcg ttgatgtctt
     2761 ctttacgtaa cgggcggttt accatctcga gcggaccggc gataaatttg ttgccacctc
     2821 tcaggatcgc cgcaactccg ggatgtttct cttccgttgt cttaaaacat ttttgagaaa
     2881 ggttcgcaag atcgagttcg aacttttcgt caacggtcat gattgcaagc acacggccgg
     2941 ttttatcgag caacgcgatc tcttctcctg tcttaatctc atcgtattta tcacccgctg
     3001 gcaataagat cggaattccc catgcaaggc cattcgtcaa ttgcattttt tcgatcgccg
     3061 attcactgtc cgcttttccc ataaaaccgg tcagcgggct aaaagcacca atagcgatca
     3121 tttccacatc agcgccataa cgatcttcaa tggttagctg gaaaagaccc tgcgcttttt
     3181 cttctaattc ctgttggcgc gcgccggtag cgattctgtt caccagcacc ccaccatgtg
     3241 gttgattcat gtatgaatat ttttaatgat aaaaaattaa gattccatct cctccatgta
     3301 accgttcgat tccaggtagc ttatcacttc cagggcacat tcttccaggc ttttttcacc
     3361 agtgtaaatc gtcagctcag cgttttcagg tgcttcatac ggatcgtcaa tacccgtaaa
     3421 atttcttatt tcgccggcgc gtgctttttt atataaacct tttggatcgc gttcttcgca
     3481 aacatcaagc ggagcgttta caaaaatttc gatgaactct ccatcgttaa ctaactggcg
     3541 caccatatcg cgatcttcgc ggtagggaga aatgaaagcc gtagatacga aggcccccgc
     3601 gtccacaaac agttttgaaa cttcacctat gcggcggatg ttctccttac ggtcttcggt
     3661 gctgaatcca aggcctttgt tcaacccgtg gcgaatgtta tccccatcga gcacataggt
     3721 gtgaattcct ctttcaaata atttttcttc tactttgtta gcgagggttg acttgccggc
     3781 gccggaaaga ccggtgtacc acagaattgc agatttgtgc ccattcatgc ggtggcggtc
     3841 ctgcttagtg atggtcgtgg catgccagac gatgtttttt gtagcttcca tgcaaacgag
     3901 ttttgttttt ataaaaattt gcggcgaatg tacggctatg catcgagaat tcctattgac
     3961 gcgataggta attgagaaat atgggacatt gtcatcttat agttctactt gtcgagccat
     4021 cagcagatcg gtctgtacgt cgtcgcctag cataaaagtg tggtcgccaa acgttttgaa
     4081 accgtgtctt tcataaaagc ggatagcctt atcatttttt tcccatactc ccagccaaat
     4141 atactgccgc cgcatttctt ttgcagtaga tacgcattcc ttcagcataa ggctgcctat
     4201 gcctttgcta atttctgagg atgcggtgta gattcttgct atctcaatga tattatccgt
     4261 accgagcggc tcttcgggaa ggtttttatc tctcattcgc acataacccg caggttcatc
     4321 gccgacaaat gcgagcagga aaatattgcc tggagcagca acctcggcaa tcagcttttc
     4381 cctggtaaaa acttcattca tgaacttgtc catgtttgct ttggtgttgt aaggagcaaa
     4441 cgcattataa aaggtttcgc ggctgaggtc ggctattagt tccgcgtcag aagcagtagc
     4501 ttgccgtata acgacttgat tcatcctgtg ataggttttc ttaaacagca atggtaattg
     4561 tttttggaaa acttgtgctt aaaaagatcg taaaggattc tggtaggaga gtatttttga
     4621 tgcccgcaga tgatttctcc gcaaaccata gaacagatca caaaccgcat tgatatcatc
     4681 gatgtcgtga ctgaatttgt gaaactgaag aaacggggcg caaattatct cgggctctgt
     4741 ccttttcata acgagaaaac tccatccttc accgtttcgc cgtcgaaaga gatctataaa
     4801 tgtttcgggt gtggtaaaag cgggaatgcc atcaccttcc tgatggagca tgaaaagtac
     4861 agctacatcg aggcgttgaa atggctggcg gaacgttaca atgttgaaat tgaagagacc
     4921 attgttagcg acgaggtaaa actgcagcaa caggtcgccg agagcctcca tgcgctgaac
     4981 aatttcgcgc aaaaattttt cagcgagcaa ttgttttctt cggaagaagg acagaacaat
     5041 gcgcttacat acatggaaga gcgcggcttt ggcgagacga tcatgaaaaa atttcagatc
     5101 ggatacaatc cgcaacagcg cgatcatttc tcgtcggcgg ccttaaaaca gcaattcagt
     5161 aaagacatct tactgagaag cgggctttcc gttattcgca acgatgagct tgttgataat
     5221 tatcgcggac gtatcatatt tccaattcat aataccactg gcaagatcat cggttttggt
     5281 gcaagggtca ttggcagcat ggataaaggc ccgaagtata tcaacacgcc ggaaaatgaa
     5341 atttatgtaa agagcaaaat tttgtacggc tcttattttg cgcggcacgc cattgataag
     5401 aacaacgaat gtttattggt agagggatat acagatgtta ttagcctgca ccaggcggga
     5461 atggaaaatg ttgttgcaag cgggggcacc tctttaactg ccgaccagct ccggcttata
     5521 aaaaaatata cgaataacct tacgatcatt tatgatggcg acacagccgg cgttaaggca
     5581 gcc
//
LOCUS       DASQJI010000109         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_622683,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000109 DASQJI010000000
VERSION     DASQJI010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622683"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VEV83_03415"
     CDS             <1..555
                     /locus_tag="VEV83_03415"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK44189.1"
                     /translation="LRVYESVRKIRNDLILRIEHLGLPSDHHLQKMHELNIHCVSQSI
                     FLKELGKNFEQYLEAERLHSLYPYRKILNNKINLALSSDAPVVKDLDPISGIKAAVFR
                     KDIEGNIIGRGEKISLQEAIYAYTLGAAKANGTDIGNGSIEVGKRADFILLNKKLGDV
                     IEENEEIYVKSTFIDGKEVYRYDP"
     gene            complement(571..783)
                     /locus_tag="VEV83_03420"
     CDS             complement(571..783)
                     /locus_tag="VEV83_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44190.1"
                     /translation="MKAIVALAALLIPIMSFAHPGHGSTDGYNLIHYFVEPEHAVFTW
                     TFVLIGVCLVSMYGVKKRKTDRANPV"
     gene            1004..>1857
                     /locus_tag="VEV83_03425"
     CDS             1004..>1857
                     /locus_tag="VEV83_03425"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HYK44191.1"
                     /translation="MADNATIEFTESKRSGILDKLWKLQNTVGYITDQAVKQIADEYN
                     ISTIEVEGVVSFYHFFHRRPAGKYTVYLNNSIVADIKGFNRIKETFERETRTTFGSVD
                     RTGTFGLFLTPCIGLSDQEPSALINFYPFTNLNGIKVKDIISKLKNGADPASICDTPA
                     DNIRHTPHRSVFFEKMVPGSALAKAGKLGPEGVVSEIKRSELAGRGGAYYPTWKKWEA
                     ARVQPASPKFVICNADEGEPGTFKDRVLMNTQAASMIEGMIICGYTIGAAFGIIYLRG
                     EYWWLKHKL"
BASE COUNT          582 a          377 c          418 g          480 t
ORIGIN      
        1 ttgcgggttt atgaaagcgt caggaagatt cgcaatgatt tgattttacg gatcgagcat
       61 cttggattgc catccgatca tcacttacaa aaaatgcacg agttaaatat ccattgcgtt
      121 tcacaaagta tttttctgaa ggagctcgga aaaaatttcg agcaatattt ggaagccgaa
      181 cgtttacaca gcttataccc gtacagaaag atcttaaata ataaaataaa cctggctctc
      241 tcaagtgatg cacctgttgt aaaagatctc gacccgataa gcgggatcaa ggccgctgtt
      301 ttcagaaaag acatcgaagg aaacataatt ggtcggggtg aaaaaatttc tttgcaagaa
      361 gcgatctatg cgtacaccct cggtgctgca aaagctaacg gcactgatat tggcaatgga
      421 agtattgaag ttggcaagcg tgccgacttt attttattga acaaaaaatt gggagacgtt
      481 attgaagaga atgaagaaat atatgttaag tcgacgttta tcgacggcaa agaggtttat
      541 cgctacgatc cataaatcaa cgctaagaaa ctaaacggga ttcgcccgat ccgtctttcg
      601 cttttttacg ccatacatac tcaccaggca aacgccgatc aaaacaaacg tccacgtgaa
      661 tacagcgtgc tcaggttcga caaaataatg tataaggttg taaccgtccg ttgaaccatg
      721 gccgggatgt gcaaacgaca ttattggaat caaaagggct gcaagtgcaa cgatcgcttt
      781 cataattttt ttttgacttg taaattttca gaataaccgt acaaccggag atgcattgcg
      841 tcatgttgtt gtatgatcct tgtcatgacc ccagtaaaaa tttaacagga atgaccattg
      901 ttaatcgatg ctatgataaa cgtcatgctt cacactcatc gatttaaata gcttagcggc
      961 gcccgtaaat ccaggaagtt agagccaata atttaaagat gttatggccg ataatgcaac
     1021 gatagaattc acagagtcta agcgaagcgg catacttgac aagctctgga aattacaaaa
     1081 taccgttggc tatatcaccg atcaggctgt aaaacaaata gccgacgaat acaacatttc
     1141 gaccattgaa gtggaaggag ttgtttcctt ttatcatttt tttcatcgga ggccggcagg
     1201 caaatacacg gtctatctta acaacagcat agtcgcagat atcaagggat tcaatcgaat
     1261 aaaagaaacg tttgaacgag aaacgagaac tacgtttggt tcggttgatc gtactggcac
     1321 attcggtctt ttcttaacgc cgtgcattgg tctgagcgac caggaaccat cagcgctgat
     1381 aaatttttat ccattcacga acctaaatgg gataaaagta aaagacatta tatcgaaact
     1441 aaaaaatggt gcagatcctg cctcgatttg cgatacacca gctgataaca ttcgccatac
     1501 gccccatcga tctgtcttct ttgaaaaaat ggtgcctggt tccgcgttgg cgaaagccgg
     1561 aaagctcggt ccggaaggag tggtcagtga gataaaaaga tcagagcttg ccggtcgcgg
     1621 cggtgcttat tatcccactt ggaaaaaatg ggaggcagcc agggtgcaac cagcgtcacc
     1681 aaaatttgtg atatgcaatg ccgacgaagg tgaaccaggc acatttaaag accgtgttct
     1741 gatgaatacg caggccgcat cgatgatcga aggcatgatc atctgcggtt acacgatagg
     1801 cgctgcgttt ggcatcattt atttgcgcgg cgaatattgg tggctaaaac ataagct
//
LOCUS       DASQJI010000110         3189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1236858,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000110 DASQJI010000000
VERSION     DASQJI010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236858"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1887)
                     /locus_tag="VEV83_03430"
     CDS             complement(<1..1887)
                     /locus_tag="VEV83_03430"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK44192.1"
                     /translation="MKKFYPVLLLLCYLLNTLKAEAQSQAQTKYNVLFIIVDDMSIAF
                     DAFGNPQSPSPNFERLVQHGVWFKTTYVSYPLCCPSRTATFSGMRPDSNGVVNNGTTN
                     LRWKMGAGFRFFPEYFHDNGYHTESFGKVGPCGEEDQVSWDYTFKADHSKGHFDHVPT
                     WWVDTLVKTIDGTEGSINVDSLLVKMDNPPSTPYMYGLGLQTHNAFTPILDSWNTIGD
                     STAQELVQLDRYGTKTDVKGTSSRKIKMPGGPSNDTADIPSPAFNKDFYPLYGRRKVQ
                     DIRHAYFAEMMEADHNLGTVLDELDSKNLWDNTIVIFTSDHGLHMGEHQGIFLKNTLF
                     EESLRIPFVVCAPGKLKGAVCHQPVEMIDLYPTLIELCGLASKPGQQGSSLVPLLENP
                     NAPWKEAVFSQRALDLDQAKYGDPQGRSVRTMKWHYNNWGSFGEELYDMKADPHEYTN
                     LANDTAYADVLKHMRRLLGEFVAGTALTAPTYTKSTYFMDADGDGYGNDMATTTAYFA
                     PQGYVAKGGDCDDHNTQVYPGAKTCSSQALSSSLSSQKFSVFPNPTADKVNISFTNDK
                     AGGNISLNVYDMGGKLALSKKDVARTGKNTYQLSLGHFAAGTYTVELRASDGSALQQT
                     KVIVK"
     gene            complement(2449..>3189)
                     /locus_tag="VEV83_03435"
     CDS             complement(2449..>3189)
                     /locus_tag="VEV83_03435"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44193.1"
                     /translation="WSFDALTGALIIADVGQSTWEEVDRQKAGSHGGQNYGWRCYEGN
                     HPFNTAGCKPQSAYTSPVFEYQHLNGDCSITGGFVYRGGQYPKLYGKYFCADYCSGFI
                     RAVSIYASTVTAQTVYDGPANAYTAFGEDIHRELYVTDLTRGLIYRVTDSSAAPNIAG
                     QYVPEFFNIVPNPAKGNFNIVYQSATSQQVQVRVENLVGQQFYAGTKSASPGKNIWRI
                     NIDLPAGNYYVTLTDHYGRVINQQLIIR"
BASE COUNT          837 a          752 c          709 g          891 t
ORIGIN      
        1 tttcactatc actttcgttt gttgaagtgc actgccatcg cttgccctta attccacagt
       61 atatgttcct gcggcaaaat gcccgagtga taactggtaa gtgtttttgc ctgtcctcgc
      121 cacatctttt ttgctaagcg cgagttttcc tcccatatca taaacattca acgatatgtt
      181 gccgccagct ttatcattcg tgaagctaat gtttacttta tctgcggtcg gattcggaaa
      241 cacagaaaat ttttgagatg agagcgaact gcttagcgcc tgggagctgc acgtttttgc
      301 acccgggtag acctgcgtgt tatgatcatc gcagtctccg ccctttgcta catatccctg
      361 cggtgcaaaa taagctgtcg tcgttgccat gtcgttacca tatccgtctc cgtcagcatc
      421 catgaaatag gtgctctttg tgtacgtggg tgcggttaac gcagtacccg ctacaaactc
      481 tccgagcaac ctgcgcatgt gttttaaaac atctgcataa gcggtgtcat ttgccaggtt
      541 ggtatattca tgaggatccg ccttcatgtc gtacaactct tcaccgaaac tgccccagtt
      601 attataatgc catttcattg ttctcactga cctgccctgc gggtctccgt atttggcctg
      661 gtcgagatcg agcgccctct gtgagaaaac ggcctctttc catggagcat taggattttc
      721 caaaagcgga accaggctgg atccttgctg gccgggcttt gaagccaaac cacaaagttc
      781 aatcagggtt ggatacagat cgatcatttc caccggttgg tgacaaacgg cacctttcaa
      841 ttttccgggt gcacaaacga caaaaggtat tcgaagcgat tcctcgaaaa gtgtgttttt
      901 taagaatatg ccctggtgtt cacccatatg taagccatga tcgcttgtaa aaattactat
      961 cgtattatcc caaagatttt tgctgtcaag ttcgtcaagt accgttccaa ggttgtgatc
     1021 tgcctccatc atttccgcaa aataagcatg tcgtatatcc tggacttttc ttctaccgta
     1081 cagcggataa aaatccttgt tgaacgcagg cgacggaata tccgccgtat cattggaagg
     1141 gccgccgggc atttttattt tccttgaact ggtaccctta acgtccgttt ttgtaccata
     1201 tcggtcgagc tgtaccaact cctgtgcggt agaatcgccg atagtgttcc agctatccaa
     1261 aattggtgtg aaggcattgt gcgtttgaag tccgagtcca tacatgtatg gcgtagaagg
     1321 cggattgtcc atcttcacca ataatgaatc aacattgatg cttccttcag tgccgtcgat
     1381 cgtttttacc aatgtatcca cccaccaggt aggaacatgg tcgaaatggc cttttgaatg
     1441 gtcagcttta aatgtgtaat cccatgatac ctggtcttcc tctccacaag ggccaacttt
     1501 tccaaagctt tccgtgtgat aaccattgtc gtggaagtat tcagggaaaa atctaaaacc
     1561 ggctcccatt ttccacctga ggttagttgt cccgttattc accacgccat ttgaatccgg
     1621 cctcatccca ctaaaagttg ctgtacggct tgggcagcac aagggatagg aaacataggt
     1681 tgttttaaac caaacaccat gttgtaccaa acgctcgaaa ttaggagacg gagattgagg
     1741 attcccaaac gcgtcaaagg caatgctcat atcatctaca atgatgaaca gcacattgta
     1801 ttttgtttgg gcttgtgatt gggcttcggc ttttagcgta ttcaacaggt agcagagcag
     1861 caagagaacc ggataaaatt tcttcataag tttttaagtt tgcttttaat ggaaaacatg
     1921 ccacaacgaa aaccttgggc gcgataaaaa tagagacaaa tgtgagaata gcaagcaaac
     1981 atctaccttt tttattccgg ccgaaaaaag atttcagtcg caaagaaata aagagaagca
     2041 cacgggttgt attgtttaaa aaatgctttg tgcgcttcgc tagcttactg cgaatggtgt
     2101 ttactctctt caggacacaa tatctctccc acgaagtcta ttgagcccac aaaggaataa
     2161 gaggaagcac accggttgta cggctcaaaa aatgctttgt gcgctttgcg ggttagtggg
     2221 aatggcgtta ctctgatcgg aatgcagtat cgctcccacc aagtccactg agcgcacaaa
     2281 ggaataagac gaaccaactt ctcttgtacc cttaaaaaaa atgctttgtg cgtagcttag
     2341 tgggaaatga tcgttccttt tattggaacc caatatctct cccaccaatt ccactggggg
     2401 cacaaagccg cggcattcgt taagatagat ttaccacaag acaaatcttt atcgaattat
     2461 cagttgctga tttatcacac gcccgtaatg atctgtgagc gttacgtaat aattgcccgc
     2521 agggagatcg atatttattc gccagatatt cttgcccggc gacgctgatt tggtgcctgc
     2581 gtaaaattgc tggccgacaa gattttcaac gcggacttgc acctgttgag aagttgcaga
     2641 ctggtagaca atattaaagt tgcccttcgc tggattagga acgatgttga aaaattcagg
     2701 cacatattga ccggcgatgt taggtgcagc ggaactgtct gttacgcggt agataagacc
     2761 cctggtaaga tcagttacgt acaactcacg atgaatgtct tctccaaatg cagtgtaagc
     2821 atttgcaggc ccatcgtaga cagtttgtgc agttacggtc gatgcgtaaa tgctcacagc
     2881 gcggatgaac ccactgcaat aatctgcaca aaaatatttg ccatacagtt tcggatactg
     2941 gccgcccctg tatacaaaac cgccggtaat ggaacaatca ccgtttagat gttggtattc
     3001 aaaaaccgga gacgtgtaag ccgactgcgg cttgcaacca gcggtgttga atggatgatt
     3061 gccttcataa caacgccagc catagttttg tccgccatgg ctgccagctt tttgacgatc
     3121 gacttcctcc cacgtggatt ggccaacatc tgcaatgatc aaggcgccag taagtgcatc
     3181 aaagctcca
//
LOCUS       DASQJI010000111         3203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2926623,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000111 DASQJI010000000
VERSION     DASQJI010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2926623"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VEV83_03440"
     CDS             <1..565
                     /locus_tag="VEV83_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HYK44194.1"
                     /translation="LKYRGHLDNISNNLLIGAVNFFNNQTDSVKNQLTGEYGAVPATQ
                     RAYKAAGIATVVVGDENYGEGSSREHAAMEPRHLGVRAIIVKSFARIHETNLKKQGML
                     ALTFANKEDYDKVQEDDTIDILGLKEFAPGVPLTIMLHHADGESESFEVNHTYNEQQI
                     EWFKAGAALNIIRKKFNAPASEEVPVS"
     gene            complement(659..1945)
                     /locus_tag="VEV83_03445"
     CDS             complement(659..1945)
                     /locus_tag="VEV83_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK44195.1"
                     /translation="MQTKFPYRYRVLVLLFFLTFITYLDRVCVSLVGVRIKTDFKLTN
                     EQFGWVLGAFSLAYALFEIPSGVLGDKIGQRAVFIRIVLWWSLFTALTGLTNGFLSLL
                     LVRFLFGVGESGAYPTSSGVISRWFPVSETGRSMSSLFIGQNAGAAIAPLIVIPIAIA
                     FGWRATFFVNACLGLVWVIICFYWFKNNPAEKKAVTEEEKNFIENNRRCIDHKGTFSW
                     NVIFKSRSLRALVVTFFCSQWAQYFFVAWMPVYLQEGKHFSEGDMKLVTSYFFVVGMA
                     GVLLTGFLSDLLVRKKGLKFGRRFLGILPMSMLALALVVVALTSNNIIVIVALYFGQL
                     LYSFIPVVSFSTCVDVGGHRAGTIAGTMNFFGQIGAFFLAITFGKFADAMHSFIFPML
                     LIAGVLLAGSLFWLLVDPTKQLVQTSVSEKKVAVVT"
     gene            complement(2063..2380)
                     /locus_tag="VEV83_03450"
     CDS             complement(2063..2380)
                     /locus_tag="VEV83_03450"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HYK44196.1"
                     /translation="MKQIIRLYLCVCSTEPGSDTNLLILCGMVAFLTDVTRTPFTSAI
                     LVLEMTDRHDVIFHLMLAGMVASLVSFVIDKHSLYDHLKFQYMHELTREHEEKESRIK
                     QLS"
     gene            complement(2377..2850)
                     /locus_tag="VEV83_03455"
     CDS             complement(2377..2850)
                     /locus_tag="VEV83_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44197.1"
                     /translation="MSKQIGLVITICTAIISCNTAVQHNATRYDKLPIQGTWKLLTGT
                     LIEKGDTTVTDYTKGKEFIKIINDTHFAFMTHDLNKGKDSTAEYVSGGGDYSLSDNSY
                     TEHLVYCSDRQWEGNDFKFAVSIHNDTLVQQGVEKIDSLGVNRINIEKYVRLDKR"
BASE COUNT          984 a          700 c          696 g          823 t
ORIGIN      
        1 gttaaaatat cgtggccacc tcgataatat ttcaaacaac ttactcatag gcgcggtgaa
       61 ctttttcaat aatcaaaccg acagtgtaaa aaatcaactt accggtgaat atggagctgt
      121 tccagcaacg cagcgcgcat acaaagccgc tggtattgcg acggttgtgg tgggtgatga
      181 aaattatgga gaaggaagca gccgcgaaca tgctgccatg gaaccgaggc atcttggcgt
      241 gagggcgatc attgtaaaaa gctttgcgcg catccatgaa accaatttaa agaagcaggg
      301 aatgctcgca ttaacctttg cgaacaaaga agattacgac aaggtgcagg aagatgatac
      361 gatcgacatt ttgggattaa aagaattcgc gccgggcgtg ccgctcacaa taatgttgca
      421 ccatgcggac ggcgaatctg aaagcttcga agtaaatcac acgtataacg aacagcagat
      481 cgagtggttc aaagcgggag ccgctttaaa cattattcgt aagaagttca acgcgcctgc
      541 atctgaggag gtgccggttt cctagagttg tttagtgtgc gcattgcgtt aagggacttg
      601 tcggacgaga gaactgatgc ccgaccaaga gtataacgga tattcaggta tgaggcactt
      661 atgtaacgac tgctactttt ttttcagata cacttgtttg aacgagttgt ttcgttggat
      721 ctaccaacag ccagaaaaga cttcctgcaa gcaacactcc ggcaattaat aacattggga
      781 aaataaaact gtgcatcgca tccgcaaatt ttccaaacgt tatcgctaaa aagaacgcgc
      841 cgatctgtcc aaaaaagttc atggtgcctg cgatcgtgcc cgcgcgatgg ccgccaacat
      901 caacgcaggt agaaaacgac actaccggaa taaacgaata gagaagctga ccaaagtaga
      961 gcgcaacgat cacaataata ttatttgagg ttaacgcaac tactacaaga gcgagcgcaa
     1021 gcatgctcat cggcaagatg cccaaaaatc ttcggccaaa tttcaaccct tttttcctta
     1081 ccagcagatc gcttaaaaaa cctgtcagga gaacaccagc cataccaaca acaaaaaagt
     1141 aagaagtaac caacttcatg tcgccttcag aaaaatgttt tccttcctgc aagtacacag
     1201 gcatccatgc aacgaaaaaa tactgagccc attgagaaca aaaaaatgtg accacgaggg
     1261 cacgcaagct tcggctttta aaaataacgt tccatgaaaa tgttccctta tgatcaatgc
     1321 agcgtcgatt attttcgata aaattttttt cttcctcagt aacagctttt ttttcggccg
     1381 gattattttt aaaccaataa aagcagataa ttacccatac gagtcccaaa caagcattta
     1441 caaaaaaagt tgcccgccaa ccaaatgcga ttgcaatagg aattacgatg agcggtgcaa
     1501 ttgctgcgcc tgcattttgt ccaataaata atgacgacat actccgccct gtttcagaaa
     1561 cggggaacca gcgcgagatc acaccggagc tcgtcggata agcgcccgac tctcccactc
     1621 cgaaaaggaa gcgaacgagt aagagggata agaaaccgtt cgttaacccg gttaatgcag
     1681 taaacaacga ccaccataat acgatccgga tgaaaacagc acgctggcca attttatcgc
     1741 ccaatacacc agacgggatt tcaaataatg catatgctag tgaaaaagcg ccgagcaccc
     1801 aaccgaattg ttcattggta agtttgaaat cagtttttat tctgactcca acaagagaca
     1861 cgcaaactct atcgaggtat gtgataaaag tgaggaagaa aagaagaacc agcacccggt
     1921 aacgatatgg aaatttggtt tgcattcttg cgacagatat ccagcaaccg gtgaagatat
     1981 gaattcacaa cgggcgacga caatatgcgt ttccatcttg ctgatcaatt ggcgaaatcg
     2041 gaccgtactt gaagcctggc tgttacgaca attgtttgat ccgcgactct ttttcctcgt
     2101 gctccctcgt tagttcatgc atgtattgaa acttgaggtg atcgtacaaa gaatgtttgt
     2161 cgatcacaaa cgaaacgagg cttgcaacca tgcctgccag catcaaatga aagatcacat
     2221 cgtggcggtc agtcatctcc agcacaagta tagctgatgt gaacggggtt cgggtaacgt
     2281 ctgtgagaaa agcgaccata ccacaaagta taagcaaatt agtatcggaa cctggttcag
     2341 tagaacatac gcaaagataa agtctgatga tttgcttcaa cgcttgtcta gccgtacgta
     2401 tttctcaata ttaatcctgt tgacgccaag gctatcgatc ttttccacgc cctgttgaac
     2461 gagggtatcg ttgtgaattg aaaccgcgaa tttaaaatcg ttcccctccc actgcctgtc
     2521 gctgcaataa acgagatgct ctgtgtacga gttgtcggac aaagaataat caccgccacc
     2581 tgatacatat tcagcggtgg agtcttttcc tttattaaga tcatgggtca taaaagcaaa
     2641 atgtgtgtcg ttgatgatct tgataaattc ttttcctttt gtatagtcgg tcactgttgt
     2701 atcgcctttt tctatcagcg tgcccgtgag cagcttccat gttccctgta ttggcaattt
     2761 gtcgtaacgc gtggcgttat gctgaactgc agtgttgcac gaaatgatcg ctgtgcatat
     2821 ggtgataaca aggccgattt gtttgctcat gaatgttgtt tgtcttgtga ttagtggcgc
     2881 aaaatagtta gatcaaacta catttcattc cgctggccaa attatctccg cgaatttgaa
     2941 ttaaatcgaa ggcggactga aattttgagt tgatattttc atttcccaat taaacaatat
     3001 tccggcagct ttgatagaaa cctaattttt aaaaatgtga taaaaaacgg cagatcgttg
     3061 ccgccgggaa aattttttga ttaagtttaa gtctaaaaca aaggaaccaa aaaaatcctg
     3121 cactgtacat gagatgtaac tgcgttttca tatcagttat catgattttc gttttctgcg
     3181 cggggcattt gtttgcccag acg
//
LOCUS       DASQJI010000112         7316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_776744,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000112 DASQJI010000000
VERSION     DASQJI010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7316
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776744"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VEV83_03460"
     CDS             complement(<1..187)
                     /locus_tag="VEV83_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44198.1"
                     /translation="MNKVTKFILRRCKYVAFAMLTILLLLVAFPGFTQLYPHEGFVTV
                     KGGKVWYRIMGSGNKPPL"
     gene            complement(180..560)
                     /locus_tag="VEV83_03465"
     CDS             complement(180..560)
                     /locus_tag="VEV83_03465"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK44199.1"
                     /translation="MLLNLYNNAFYAVSERSKNPEGFGQLEARGPQPEANSEPYVPQV
                     TIVTKKLNDKIEITVSDNGNGIPKNIVDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAH
                     SGEISVETTEGEGTTFIIQLPKHE"
     gene            complement(679..1230)
                     /locus_tag="VEV83_03470"
     CDS             complement(679..1230)
                     /locus_tag="VEV83_03470"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HYK44200.1"
                     /translation="MIKQWWINLLQGILLIILGIYIFAEPASALAGISVAFGTLILII
                     GAAGILAWLSGKERRANGFLVWSVLTALFGLLILMHVVVAVKIITIAYGLLVLLIGFN
                     LLNSGWRIKQDTFTGWMMVLVGLFSIFAGVKMIFNLDSGIAGSATIIGIQALLAGICL
                     VLFAFAKKMVVGKVRSKLKSLID"
     gene            complement(1488..2138)
                     /locus_tag="VEV83_03475"
     CDS             complement(1488..2138)
                     /locus_tag="VEV83_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK44201.1"
                     /translation="MKKITLSIIAFAMLTGCSTMNKQQKGTAIGAGGGAAVGAIVTGG
                     SIWGILAGAVIGGTAGNLIGKKMDQQAKELKQAVPTADVQRVNEGIAITFESGLLFKI
                     NSSDINDAYMADLSSAAEVFVKYPETNITIHGHTDDTGSDEFNMTLSEKRAKSVADFL
                     ISKGVAANRIIEKGFGETLPKYPNDSEENRAKNRRVEIAVVANAEMQQEAKEGKLQ"
     gene            complement(2290..3135)
                     /locus_tag="VEV83_03480"
     CDS             complement(2290..3135)
                     /locus_tag="VEV83_03480"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44202.1"
                     /translation="MKHTTTAFLRWGVPLLLLLLFSSSAMAQTFTMGKECRAKNDSAT
                     ARLKEKKYQEALDAYAAMEKSCKTKDAKEAIAVGKAEAFNGLGKYEDAIKASDAALKI
                     TKNKSLGGYFQKAYAQNKMGQHEESKATFSKMIALTEKNQNTKARASNYATLSAVEYR
                     QLNEKDSAYFYLDKAIQLDSTNANFYIQKGDMLIGEKKYDEAFEQYDKGVASGKADMD
                     MYKIRTDARMKMVQDKYNTDNTQELRSKMTQQEKEQVCTELNKTISLGLHDMRYDMFA
                     SLVCK"
     gene            3473..3715
                     /locus_tag="VEV83_03485"
     CDS             3473..3715
                     /locus_tag="VEV83_03485"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK44203.1"
                     /translation="MQYGGTVYILTNVHHEVLYIGVTSDLFTRIPEHIMKVYPNSFTA
                     KYNCNKLVYYETFGRIEDALQEKNSCRSGIDLGRIH"
     gene            3687..3833
                     /locus_tag="VEV83_03490"
     CDS             3687..3833
                     /locus_tag="VEV83_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44204.1"
                     /translation="MESILEEYIDFGYESGMEGFVHWPLKLLTADARSGPGMTATLLP
                     CVWQ"
     gene            complement(3882..6173)
                     /locus_tag="VEV83_03495"
     CDS             complement(3882..6173)
                     /locus_tag="VEV83_03495"
                     /inference="COORDINATES: protein motif:HMM:NF039776.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GEVED domain-containing protein"
                     /protein_id="HYK44205.1"
                     /translation="MKKTIILISYLLTASANLFANYYTDWIKPADNYQKSGCMIARDN
                     ADNVVVTGYIQAQNIYTRKYDKFGNFMWERTDSSGIHSNYEKPRWVNCDKNKNIYVVG
                     YRYTWSSSWEYPDAVVVLKYNASGTLLWKQNISLSYIVGSSTGLAFNLKSEIDNNGNL
                     YIGTAGTSPSGFVLIKLNPAGTVLVNTTKNLGTIHGFASMRLKGDKVIVTGTASYNQN
                     LAIVAWDTAGTFLWSKVLGGFSGKDVEIDGSGNSYILTTYPNQVSSTSGNDVVIYKFN
                     SAGVQTWTKKFDFGGEETATRFTLVSNKLSVIAFGSINASYFDWITFQITTGGAMLWN
                     ARYNETAGNDEQPYFIAAKASGEVFVTGKGGPMFTQPNGSSYLRMITLKYGNTGVTQW
                     VDSLNIYSGWGIACTIASDSSLFVLSGTNMTAFHFLDHTGVGSCGIPSGLNTTNVKNT
                     SATFSWTPVAGAYLYHLRFKTISAVDWTTVSTNLNSINIKPLTAGTSYNYAVEAICNS
                     GPSAFSPSQNFTTTGTGYCTTAGQDASTEYLTFVWIGAIQNVSASNNGYADFTNLSTP
                     LTQGATVYGYLSATLPYGLSEYYSVWIDYNHDNDFTDAGELAVNISSTFLGYIAINFT
                     VPANAIPGATRMRVTMRYDSPPSPCGSYPRGETEDYTVNITAQQPASSIAENSIATQK
                     EIVDASIFPNPANDYIILNLHGWKGITAICVYDVTGKLMQKRQFINTNQSRLDISSLK
                     SGLYMLRVLDEGGHLSILKFIKE"
     gene            6551..7312
                     /locus_tag="VEV83_03500"
     CDS             6551..7312
                     /locus_tag="VEV83_03500"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK44206.1"
                     /translation="MMKDDISLAEWALVDEIRAGQWKTLDFPKIAREDFGLNGIEFVN
                     TLFEVPTNTYLKTLKDNAAGHGVEMVLIMIDDEGDGCASTRKEREQFAINHRKWIDIA
                     HYLGCHAIRTNCRGTADVSKTDALKIAADSYNLLLEYAAEANVKVLIENHGGVSNDPD
                     WMVSLMRDVNHPLFGTYPDWREPSAEFDNYVYLEKTLPYAKGMSYRNQPTEELTAKMI
                     SLCKESYHGWYGIESSGREAIVEGKRLLNRYLFER"
BASE COUNT         1970 a         1585 c         1562 g         2199 t
ORIGIN      
        1 gcaatggcgg tttgttaccg ctacccatga tcctgtacca aactttaccg ccttttactg
       61 taacaaaccc ttcatgcgga tacaactgtg taaaaccagg gaaagctaca agcaatagca
      121 aaatggtgag catagcaaaa gccacatatt tgcatctgcg aaggatgaat ttcgtaacct
      181 tattcatgtt tgggcaattg aatgataaat gttgtgcctt caccttctgt tgtttccacg
      241 cttatttctc cactgtgcgc tttaataata tcatagctca aactcaaacc taaccccgtt
      301 ccttcgcccg ttggtttcgt ggtaaagaat ggctgaaaga ttttatcgac gatgttctta
      361 ggaatgccat tgccgttgtc gcttactgtt atttcaattt tgtcattgag tttttttgtg
      421 acgattgtga cttgtgggac gtaaggttcg ctattagctt caggctgtgg gccgcgagct
      481 tctagctgcc cgaaaccctc ggggttttta ctcctttcac tcacggcata aaacgcattg
      541 ttgtataaat tcaaaagcac cctccctata tcctgcggaa caagagttat ctcgcaaatc
      601 gtttcagttt taatacttgc atgaaataaa ctgtcgtttg ggcgaaggcc gtgatatatg
      661 acaagccgct ggttaagttc aatcgatcag cgattttagt ttagatcgca cttttccaac
      721 aaccattttt ttagcgaagg caaataaaac gaggcatatt cctgcgagca aagcctggat
      781 cccgataatt gtcgccgacc ccgcaattcc gctgtcaagg ttaaatatca ttttcacgcc
      841 tgcaaaaatt gaaaacagtc caaccaaaac catcatccag ccggtgaacg tatcttgttt
      901 tattcgccag cctgaattca gcaaattgaa gccgatcaat aacaccaaca ggccatacgc
      961 gattgtgatg atctttactg caaccaccac atgcattaaa atgagaaggc cgaacagtgc
     1021 agtaaggacg ctccacacga ggaagccatt tgcgcgtcgt tctttaccgg ataaccaggc
     1081 aagtattcct gctgctccga ttatgagaat taatgttcca aacgcaacag agataccggc
     1141 cagtgcactt gccggctctg caaaaatgta tattccgaga atgatcaaca ggataccctg
     1201 gagaagattg atccaccatt gttttatcat gatattattt ttttgaatga agaattccga
     1261 gcccgctacc ggtcagacgc tttgaaagcg tcagaccggt cacgcaatat tgttagctat
     1321 tttatttttt catgaatgtt caacctagtg aaactttgtg ccgtggcgtc ctggtggttt
     1381 ctgttgtctt gaacgcgaag ccccaaaggc acgaagaata cacgaagaaa aataaggtgc
     1441 tacaatccta tcacgacacg ttagttagag ccaacccgca attaattcta ttgaagtttg
     1501 ccttcttttg cttcctgctg catttctgca ttcgcaacaa cggctatttc taccctgcgg
     1561 ttctttgccc tgttttcttc actgtcgtta ggatattttg gcagtgtttc gccgaatccc
     1621 ttttctatga tacggtttgc cgcgacacct tttgaaatga gaaaatccgc aacggacttc
     1681 gctctttttt cggaaagcgt catattaaac tcatccgatc ccgtgtcatc tgtgtgccca
     1741 tggatggtaa tatttgtttc aggatatttt acaaaaacct ctgcggcgct gcttagatca
     1801 gccatgtatg cgtcgtttat atcactcgaa tttattttga agagcagccc ggattcaaag
     1861 gttatggcaa ttccctcatt tacccgctga acgtcagcgg taggcacggc ctgctttaat
     1921 tccttcgcct gctgatccat ttttttgccg atcaggtttc cggcggtgcc tccaataaca
     1981 gcacctgcca ggatgcccca gatacttcct cccgtaacga tcgcgcccac tgccgcgccg
     2041 cctcccgcac caatagccgt tcccttttgt tgcttattca tagttgagca accagttaac
     2101 atggcaaagg caatgatgga taatgtaatt tttttcatga gtttattttt tgattttatc
     2161 gatgcataat cgcatcgggc gccttgtgtt attttatgtg gcctcattcg cacttccatg
     2221 gtcacgaaga gcacaaagtt tgtcacgaag aacacaacga gggaagatgc atgcagatag
     2281 tgattttaat tatttacaaa cgagggacgc aaacatgtcg tagcgcatat cgtgtaatcc
     2341 aagagatatc gttttattca gttcggtgca aacctgctct ttttcctgct gtgtcatttt
     2401 actgcgcaat tcctgtgtat tgtcggtgtt atatttgtcc tgcaccatct tcatgcgtgc
     2461 atcggtgcgg atcttgtaca tatccatatc cgctttaccc gatgccaccc ctttatcata
     2521 ctgctcaaaa gcttcatcat attttttttc accgatcagc atgtcgccct tctggatata
     2581 aaaattagca ttggttgagt cgagttgtat tgctttatcg aggtaaaaat aggcgctgtc
     2641 tttttcattt aactggcggt actccacggc tgacagcgtt gcataattag atgcgcgtgc
     2701 tttggtgttc tgattttttt cagttaaggc gatcatcttg ctaaaagttg ctttcgattc
     2761 ctcgtgttgt cccattttgt tttgtgcata tgctttttga aaataaccac caaggctttt
     2821 attcttcgtg atctttagtg cagcgtcact cgctttgatt gcatcttcat atttaccaag
     2881 cccattgaat gcttccgctt ttccaacggc aatggcttcc tttgcatctt ttgttttaca
     2941 tgatttctcc atcgcggcgt atgcgtctag tgcttcctgg tatttttttt ccttaagcct
     3001 cgccgtcgca ctgtcatttt ttgccctgca ttctttgccc atggtaaaag tttgtgccat
     3061 tgctgaagag gaaaaaagca ggagcagaag cagaggaacg ccccatctta agaaggcagt
     3121 tgttgtgtgt ttcatatccg atttttagat taattggttc ttgtgaagaa aataagccgt
     3181 ctcattttgt gcccgctcac cgattacagg cacataagaa tgtaattcgg gtgggcgcag
     3241 ttagatgacc cagcggagaa agatactaaa tattcggtgc cggcaaaaaa acggctgcaa
     3301 attcggtaag agcagctttt catttttgaa atcgaacggt attctctaac gtgtggtgct
     3361 attgaacgtt tagtcgcaat gattgccaat cttgcaataa aataatgttc aggtttcatg
     3421 tacgaggctg cacgtctttc ccgcggaggc gggaatccgc taactttagt tcatgcaata
     3481 tggagggaca gtctacatct taacaaatgt gcatcatgag gtcttgtaca ttggcgtgac
     3541 ttctgacctt tttacaagaa ttccagagca tattatgaag gtttatccaa attcattcac
     3601 cgcaaaatat aattgcaaca agcttgtcta ttatgagaca ttcggcagaa tagaagatgc
     3661 attgcaagag aaaaacagct gcagaagtgg aatcgatctt ggaagaatac attgatttcg
     3721 gatatgaatc cggaatggaa ggatttgttc attggccttt aaaattactc acagcagatg
     3781 cccgctccgg gccgggcatg acggcgacgt tgttgccatg cgtctggcag taaactaact
     3841 gaaagaggat ttccgcaagt ccattctaat accacaaccc gttattcttt aataaacttc
     3901 aaaatactaa gatgacctcc ttcgtcaaga acacgcagca tatataaacc gcttttaagc
     3961 gagctgatat ctaatcttga ttgatttgta tttatgaatt gtcttttctg catcagctta
     4021 cctgttacat cgtatacaca aatagctgtt atgcctttcc acccgtgcag atttaaaatg
     4081 atatagtcat ttgccgggtt tggaaaaatg gatgcatcaa caatttcttt ttgtgttgcg
     4141 atgctatttt ctgcaattga agatgccggt tgttgtgccg tgatgttgac ggtataatct
     4201 tctgtttcac cgcgtgggta tgatccgcat ggagatggcg gactgtcata ccgcatcgta
     4261 acgcgcattc gtgttgcgcc cggaatagca tttgccggga cagtaaaatt aattgcaatg
     4321 tacccgagga aagtggatga aatgtttacc gcaagttcgc ctgcatcggt aaaatcattg
     4381 tcatggttat aatcaatcca tacactatag tattcggaaa gcccataagg taaggttgca
     4441 gacagataac cgtaaacagt tgcaccttgt gtaagcggtg tactcagatt cgtaaaatcc
     4501 gcatagccgt tattgctcgc cgaaacgttc tgtatagcac cgatccagac aaaggtcaaa
     4561 tactcagttg atgcatcctg cccggctgtg gtgcaatagc ctgttccggt agttgtaaaa
     4621 ttttgagatg ggctaaacgc tgacggacca ctgttgcaaa tagcttcaac ggcataatta
     4681 taggatgtgc ctgctgtaag cggtttaata ttgattgaat ttagatttgt tgaaacggtt
     4741 gtccagtcaa ctgctgaaat tgttttaaaa cgcaggtgat agaggtaagc gcctgcaacc
     4801 ggtgtccatg aaaatgtcgc gcttgtattt tttacattag ttgtgtttaa tccggaagga
     4861 attccgcacg aaccgacgcc ggtatgatcg agaaaatgaa aggcagtcat attagttcca
     4921 ctcaaaacaa acaaactgct gtcgctggcg atcgtacatg cgatgcccca tcccgaataa
     4981 atatttaatg aatcaaccca ctgcgttacg cctgtatttc catattttaa cgtgatcatt
     5041 cgcaggtatg aagatccatt cggctgcgta aacatcggtc cgcctttacc agtgacaaac
     5101 acctccccgc tggcttttgc agcaataaaa taaggctgct catcattgcc tgccgtttca
     5161 ttgtaacggg cattccagag catagcgccg cccgtagtta tttggaacgt tatccagtca
     5221 aaataggatg cattgatgga gccaaacgca attacactta atttatttga aacaagtgtg
     5281 aaacgggttg cagtttcctc tccgccaaaa tcaaacttct ttgtccatgt ttgtactcct
     5341 gctgaattga atttgtatat gaccacatca ttcccgcttg ttgaagatac ctggtttgga
     5401 tacgttgtaa gtatatacga attaccgctg ccatcaattt cgacgtcttt acctgagaaa
     5461 cctcccaata ctttactcca caaaaacgtt ccggcagtat cccacgccac aatagcaaga
     5521 ttttgattat aagatgcagt gcccgtgaca attaccttgt cgccttttaa acgcatggat
     5581 gcgaagccat gtatagtacc taaatttttt gtggtgttga ctaatacggt tcccgccgga
     5641 tttagtttga tcaggacaaa ccctgacgga cttgtgccgg ctgtgccgat gtacaggtta
     5701 ccgttattgt cgatttcgct ttttaggttg aatgctaatc ccgttgaact cccaacaata
     5761 taactaaggc tgatgttttg cttccataac aaggtaccgg aagcattgta tttcaaaacc
     5821 accacggcgt ccggatactc ccaggaagaa ctccatgtgt atcggtaacc aactacataa
     5881 atgtttttat tcttatcgca attaacccac cggggttttt cataattgct atgaattcct
     5941 gaagagtctg ttcgttccca catgaaattt ccaaacttgt catattttct tgtgtatatg
     6001 ttttgcgctt gtatgtagcc tgttacaact acattatctg cgttgtcgcg ggcgatcata
     6061 cagcctgatt tctgatagtt atcagcgggt ttgatccagt cagtataata gtttgcaaat
     6121 aaattagcgg aggctgtgag gaggtagctt ataagtataa ttgttttctt cataacgatc
     6181 atttattaaa gtgttttcat attgttatca tgaaaaacca agagcattca aaacgaacta
     6241 ttaaaaataa tctaagacca acggcatcgt tcagtgcatt gttgtctact tgagccggcg
     6301 tctttgcaaa ggtgtattgc cttcttgact aaccggcgaa aagaagccct gggaaaggaa
     6361 aatgagtgtt ggaaaaactt cccgcttaaa actaggcaga gaatatttaa agtagtatga
     6421 tttgggttgg tctctagaat gattcgcatc atgcatctaa aaaatgaaaa gaaaaatttg
     6481 tttcataaaa atagtttcgc tttttgaatg ctaccgctaa ctttaaacag ctataaataa
     6541 aaacttcatt atgatgaaag acgacatatc gctcgctgaa tgggcgctcg tagacgagat
     6601 cagggccgga caatggaaga cactggactt tccaaaaatc gcacgggaag acttcggcct
     6661 taacgggatc gaatttgtga atacattatt tgaagtcccc acaaacactt atctaaaaac
     6721 cctaaaagat aatgctgctg gccacggcgt agagatggtg ctgatcatga tagacgatga
     6781 aggcgatgga tgcgcttcaa cgaggaagga gcgtgaacaa tttgccatca atcatcggaa
     6841 atggatcgac attgcgcatt atctcggatg ccatgcgatc cgcaccaatt gcaggggtac
     6901 tgctgatgtc tcaaaaacgg atgcgttgaa aatcgctgcc gactcgtaca accttttgct
     6961 tgagtatgcg gctgaggcga atgtaaaagt gttgatagaa aatcatggtg gcgtttcaaa
     7021 tgatccggat tggatggttt cgttaatgcg cgacgtcaat catcctctgt tcggcacata
     7081 tccggactgg cgggagccgt cggctgagtt cgacaattat gtttacctgg agaagactct
     7141 gccttacgca aagggcatgt cataccgtaa tcaaccaaca gaagagctta ctgcaaaaat
     7201 gatctctcta tgtaaagaaa gttatcatgg atggtatggg attgaatcga gtgggagaga
     7261 agcgatagtc gaagggaagc ggttgttgaa taggtatttg tttgaaaggt aaactt
//
LOCUS       DASQJI010000113         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2312413,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000113 DASQJI010000000
VERSION     DASQJI010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2312413"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..738)
                     /locus_tag="VEV83_03505"
     CDS             complement(25..738)
                     /locus_tag="VEV83_03505"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK44207.1"
                     /translation="MRLFLIRYTKIIFCWLQLHRVFDIFSGLFLNAFYLTKLSKFIYQ
                     NRNAALNDFPVKWNYDARYPMYKAVLEKEIGDASINYFEFGVASGQSFRWFLQQNQNP
                     SSKFYGFDTFTGLPEDWGPYKKGAFSTGNKPPEVNDARAEFHEGLFQQTLSQQLKNID
                     ANKRTVVMMDADLYSATLYVLTTMAPILKKGDLIFFDQFAVPTHEFRAYFDFTQSFYM
                     KLELIAAANNFYFVAFKVV"
     gene            complement(768..2084)
                     /locus_tag="VEV83_03510"
     CDS             complement(768..2084)
                     /locus_tag="VEV83_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HYK44208.1"
                     /translation="MKHLPLDPQIFVENRKRFVKQMQRNSIAIFNSNDELPSNGDALY
                     RFQQNSDLYWLCGIEQEDTMVILFPDNPDPKYREVLVLVRPNEMKEKWDGRRLREKEA
                     KELTGIETIVWLDALDPLLQQWIHLADIIYLNTNENDRKASLLETRDYRYVQEMKERF
                     PLHTYERTAKIMRKLRAVKTKYEIEVIKKAIDITDKTFRRLLGFIQPGVMEYEIEAEI
                     MHEFLRNRAKGEAYGSIIASGDRARTLHYVFNNEECKAGELILMDFGANYGGYAADLT
                     RTVPVSGKFTRRQKTVYNACLHLHNYAKSLLKPGITINEYHEKVGEEATVIFQKIGLL
                     KKTDIKNEDKENRAYRKYLYHGISHHLGLDVHDLGPKTAPLEAGMVLTVEPGIYIEQE
                     QMGVRIENNVWLTKNGNIDLMKNIPIEAEEIETLMASNRKLSALTA"
     gene            complement(2204..>2526)
                     /gene="metG"
                     /locus_tag="VEV83_03515"
     CDS             complement(2204..>2526)
                     /gene="metG"
                     /locus_tag="VEV83_03515"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine--tRNA ligase subunit beta"
                     /protein_id="HYK44209.1"
                     /translation="IVYDDFAKLDFRIGKILSAEKVAKADKLLKLEIDLGFEKRTVVS
                     GIAVHFAAEDIVGRQVVVVANLAPRKMRGIESNGMILMAEDSSGKLHFINPDDDTELG
                     SAVS"
BASE COUNT          646 a          610 c          506 g          764 t
ORIGIN      
        1 attcggaagc tgtttcatgt ttcgttatac caccttgaaa gcgacaaaat aaaaattatt
       61 cgccgctgca attaactcta atttcatata aaatgactgc gtgaaatcaa aatatgctct
      121 gaactcatgc gtgggcactg caaattgatc gaagaaaatg aggtctcctt tttttaagat
      181 gggagccatg gtcgtcagca catacaacgt tgcagagtat agatccgcat ccatcatgac
      241 aacggttcgc ttgttcgcgt caatattctt taactgctgt gataacgttt gttgaaatag
      301 tccctcgtga aattcggccc tggcatcatt cacttcaggt ggtttgttcc cggttgaaaa
      361 agcgcccttt ttgtatggtc cccaatcttc ggggagaccg gtaaatgtat cgaagccgta
      421 gaatttgctg gatggatttt gattctgctg taaaaaccaa cgaaatgatt gcccgcttgc
      481 tacgccgaat tcaaaataat ttatgctcgc gtcgccaatc tctttttcaa gaacagcctt
      541 gtacatcggg taacgcgcgt cataattcca cttgaccgga aaatcgttta gagcagcatt
      601 tctgttttga taaatgaact tcgaaagttt tgtgagataa aatgcattca ggaagaggcc
      661 ggaaaatata tcaaataccc tgtgcaactg aagccagcag aaaatgatct tcgtgtaccg
      721 aatcaggaat aaacgcattc atgtttgtta cacctcaaac aaccatatca cgctgtaaga
      781 gcagatagtt tccggtttga ggccatcagt gtttcaattt cttctgcttc gatcggaata
      841 tttttcatca ggtcgatgtt gccatttttc gtaagccaca cattgttttc aatacgcaca
      901 cccatttgtt cctgttcaat ataaattccc ggttcaacgg taagcaccat gccagcttcg
      961 agcggcgcag ttttcgggcc cagatcatgt acatctaatc ccaggtgatg tgatataccg
     1021 tggtacaaat acttcctgta agcacggttt tccttgtctt cattttttat atccgttttc
     1081 ttgagcaacc cgatcttctg aaaaataact gtcgcttcct ctcccacttt ttcatgatac
     1141 tcgttgatcg ttatgcccgg cttcagtaaa cttttcgcat aattatgcaa atgaaggcat
     1201 gcattgtaga cggttttctg ccggcgcgta aattttccgc tcaccggaac tgtgcgggta
     1261 agatccgcag catagccgcc gtagttcgct ccgaaatcca tcaggatcaa ttcaccggct
     1321 ttgcattctt cgttgttgaa cacataatgc aatgtcctcg cacgatcacc gcttgcaatg
     1381 atgctgccat aggcttcacc ttttgcgcgg tttcttaaaa actcatgcat gatctcagct
     1441 tcaatttcat attccatcac gccgggctgg atgaagccca gtaaccggcg gaatgtttta
     1501 tcggtgatgt cgatcgcttt tttgatcacc tcaatttcat actttgtctt caccgcacgc
     1561 agcttacgca tgatcttagc ggtgcgttcg tatgtatgca gcgggaaacg ctctttcatc
     1621 tcctgcacat aacgataatc acgcgtttcg agcaatgaag ccttgcgatc gttttcgttt
     1681 gtgtttaaat aaatgatatc agcaagatgg atccattgct gtaacaaagg atcgagcgcg
     1741 tcaagccaaa cgatggtctc aattcccgtc aactctttag cttctttttc tctcagccgc
     1801 ctgccatccc atttttcctt catttcattg gggcgaacaa gcaccaacac ttcgcggtat
     1861 tttggatccg gattatcggg gaacaaaata accatggtat cttcctgctc gatgccgcaa
     1921 agccagtaga gatcactgtt ctgctgaaag cggtataatg catcaccgtt tgaaggcagc
     1981 tcatcattgc tgttgaaaat ggcaatacta ttccgctgca tttgcttgac aaaccgcttc
     2041 cggttctcaa cgaaaatctg cggatccaat ggcaagtgtt tcatgataaa aatttacgag
     2101 ttacgattta caatttacga ttgcagattg gcgattgcag attgcagatt tgcattttag
     2161 cgtttgcaat tcacaattca ccattcacaa atcactcatc tccctagctc actgcgcttc
     2221 ccaattcggt gtcgtcgtcg ggattgatga aatgcagttt accgctgctg tcttcggcca
     2281 tcaagatcat tccattgctt tcgatgccgc gcattttcct gggcgcaaga tttgcaacaa
     2341 ctactacctg tctgccgact atatcctccg ctgcaaaatg cacggcgatc ccggacacga
     2401 ccgtcctctt ttcaaaaccg aggtcgatct caagtttcaa aagtttatcc gcctttgcaa
     2461 ctttttccgc cgaaagaatt tttccgatgc gaaaatcaag ttttgcgaag tcgtcgtaaa
     2521 caatct
//
LOCUS       DASQJI010000114         4910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_623059,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000114 DASQJI010000000
VERSION     DASQJI010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4910
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623059"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..853)
                     /locus_tag="VEV83_03520"
     CDS             complement(113..853)
                     /locus_tag="VEV83_03520"
                     /inference="COORDINATES: protein motif:HMM:NF022710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071771 - aldehyde decarbonylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty aldehyde decarbonylase"
                     /protein_id="HYK44210.1"
                     /translation="MNFKFETFEVPVKQESIITDILAQAITGELIGMSNFASLTEVID
                     DVHEKMECVEHANCERGHAEGFMALAKKYNLQPVVNMEGCYWKAVRDCFMSYAKRKDF
                     IGCLIIQEVMLECFAVSMYRDTGAALEGEIGDLFTAISKEEEEHIEHSIDLLRAEMDK
                     DPLAFYEKVKSIHNDCMTILGEWTASTDMRGHCGVCHDTCMKETLHTANLDLKTVRGN
                     ALNLYMSTLDRIGLPGDKTLQWVINLPA"
     gene            complement(899..1954)
                     /locus_tag="VEV83_03525"
     CDS             complement(899..1954)
                     /locus_tag="VEV83_03525"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK44211.1"
                     /translation="MKFTIRDAIQNDSDKLIELTALTPMKGIIGLRIDRKPDFFKLLR
                     LGDSYLALVATTIENDIVGFFAAVRTRLCLSGKETIAWYVRDLKVHPAYKGSSVGFRL
                     VKTMQARLNEVNADILCCTVAAGNDLVVPFFEGRTGIPEFIKLSDFHVYQLLPARVKK
                     NEIKNLSVVNNSLTGFFEKFFKRYSYYPMAYTEEPPEGSIMLTECEGETVNAAIVAFD
                     GQAYRQNVVTSYSWMIAALLAALKFLKLFLPLAPLPGKNEPLKMVYARWYAFAKGKEK
                     AFTVLLKRLRHYAFDNGYHFVCIAVNAADHEVVRMVKPMSSFVFKSSVMIASLKNDHS
                     LLNDMRNGLSYEDYAIV"
     gene            complement(2010..2498)
                     /locus_tag="VEV83_03530"
     CDS             complement(2010..2498)
                     /locus_tag="VEV83_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44212.1"
                     /translation="MKILAFLFTILIAHNLEAQKSIFIRVYDLKGHTIARGHVLSATD
                     TSVQLIREPTNILVRDIGSIRTKHSVGHNLLIGSAIGSSTMAIIGVASANPDEFLGYT
                     AGEGALGGFIVGVPIGAAIGALTIAFKNSKHYVINGDLQKWKAFKSTIPGQKSAQGTS
                     GP"
     gene            complement(2613..3053)
                     /locus_tag="VEV83_03535"
     CDS             complement(2613..3053)
                     /locus_tag="VEV83_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44213.1"
                     /translation="MKILAFLFTILIAHNLEAQKSIFIRVYDLEGHKIARGHVLSATD
                     TSLQLKEKTTSILVRNIGSIRTKHSAGNNMLVGSIIGTTTFAVLGAINGDTDTPAEGA
                     AYWAPVGTLLGAVFGALTIPFKNSKHSLINGDPEKWKAFRSKIP"
     gene            complement(3313..3894)
                     /locus_tag="VEV83_03540"
     CDS             complement(3313..3894)
                     /locus_tag="VEV83_03540"
                     /inference="COORDINATES: protein motif:HMM:NF026253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WG repeat-containing protein"
                     /protein_id="HYK44214.1"
                     /translation="MKRLLLLLMFPLPFCADAQKWAKNYDFVDQCSCGLAKVGKDNKV
                     GYTDNNGKIIIPLMYDEGLTFSEGFTAVRSGSTWIFLDSSGKQLSDAKFEDAQNFHNG
                     LAAVMRNGHYGYIDVQGKVAIDFQFSNARDFSEGLAPIANSHNLWGYVDGSGKTVINP
                     QYDFADSFTNGEASVMKGNKTFYIDRENKVVHQ"
     gene            complement(4263..>4910)
                     /locus_tag="VEV83_03545"
     CDS             complement(4263..>4910)
                     /locus_tag="VEV83_03545"
                     /inference="COORDINATES: protein motif:HMM:NF036772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HYK44215.1"
                     /translation="FVDNPKWIIGYSDITLLHAHIYSNFRIASLHAPMAAAFNEFDED
                     REYLESILYCLTGTKLRYQLAPHDLNKHGIAEGELIGGNLSMLAHIIGTDSDPDTTNR
                     ILFLEDIGEYKYNIDRMLMQLKRAGKFSAISGLIIGSFTEIKDTTIAFGQDVQDLILN
                     KVSEYNFPICFDFPVGHTGKNYALKVGVKHRLAIEKERIVLEEISTQELTTPPSA"
BASE COUNT         1281 a         1136 c         1041 g         1452 t
ORIGIN      
        1 gtttcctgta ccttttcgag tggcaattcg ttgccattgc ctgtaaaacg gaatgcattt
       61 acaaactgca tcaccgtatc ccaggaatcc tggtggccga ttaccgcaaa gtctaggctg
      121 ggagattgat aacccattgt agcgttttgt cgccgggtaa accaattcga tcaagtgtgc
      181 tcatgtaaag attcagcgca tttcctcgga ctgtctttag atcaagattc gccgtatgca
      241 gcgtttcttt catgcatgtg tcgtggcata cgccgcagtg tccgcgcatg tctgttgatg
      301 ccgtccactc gccgagaatg gtcatacaat cattatgaat tgactttact ttctcgtaaa
      361 atgcaagcgg gtctttatcc atttcagccc gcagcagatc gatcgagtgt tcaatatgct
      421 cttcctcttc ttttgatatg gccgtgaaca ggtcgccgat ctcgccctcg agggccgcgc
      481 ccgtgtcgcg gtacatactt acagcgaagc attccagcat cacttcctgt atgatcaggc
      541 agcctataaa atcttttcgt tttgcataac tcatgaagca atcgcggacc gctttccagt
      601 agcaaccttc catatttact accggttgca ggttgtactt cttcgccagc gccataaaac
      661 cttctgcatg cccgcgctcg cagtttgcat gttctacgca ttccattttt tcgtgcacat
      721 cgtctattac ttcagtaagc gaagcaaaat tgctcatacc gatcaattca ccggtgatcg
      781 cctgcgcaag aatatctgta atgatcgatt cctgtttcac aggtacttca aacgtttcaa
      841 acttaaagtt catatcgtta gttttatgtg agagaaaaat aatcttcttc ttagatccct
      901 aaacgatcgc gtaatcttca taacttaatc cgttcctcat gtcattcaac aaactgtgat
      961 cgtttttcaa gctagcgatc ataaccgacg acttaaacac aaagctgctc attggtttta
     1021 ccatccggac aacttcgtgg tcagcagcgt ttactgcgat gcaaacaaaa tgataaccgt
     1081 tgtcaaatgc ataatgtcgc agccttttta acaacacggt aaacgccttt tctttgcctt
     1141 tagcaaaagc gtaccaccgc gcatacacca ttttcagtgg ttcgttcttt ccgggcaatg
     1201 gtgctagcgg cagaaacagc tttagaaatt tcagcgctgc aagcaaagct gcgatcatcc
     1261 acgaatagct tgtaaccaca ttttgcctgt aagcttgccc gtcaaatgct acgatcgctg
     1321 cgttcactgt ttccccttca cattcagtaa gcataatgct gccttcaggc ggttcttcag
     1381 tatatgccat cggatagtag gaatatctct taaagaactt ttcaaaaaat ccagttaatg
     1441 agttattcac tacggataaa ttttttatct catttttttt aaccctggcc ggcaataact
     1501 ggtacacgtg aaaatcactg agttttatga attccggaat gcctgttctt ccttcaaaaa
     1561 atgggactac caggtcattg cccgcggcaa ccgtgcaaca caaaatgtca gcattcactt
     1621 cgttgagtcg cgcctgcatt gtttttacga ggcgaaagcc gaccgatgaa cccttataag
     1681 ccgggtgaac tttcaggtcg cgaacgtacc atgcgatcgt ttcctttcct gataagcata
     1741 acctggttct taccgcagca aaaaaaccaa cgatatcatt ttcaattgtg gtagcaacaa
     1801 gcgctaaata agaatcaccc aaccgtagca gcttaaaaaa atccggcttc ctgtcgatcc
     1861 tcaatccgat aatccctttc atgggggtta gagcagtaag ttcgatcagt ttatcagagt
     1921 cgttctgtat tgcatcccga atggtaaact tcacaagaca atttatgaaa aaattttcaa
     1981 ccccggaaac ttttaaagtg tctattttat tacgggccag acgttccttg tgcactcttt
     2041 tgtcctggta tcgtagactt aaacgccttc catttttgca ggtccccgtt gattacataa
     2101 tgtttagagt ttttgaacgc aattgtcaga gctccaattg cagcacctat tgggacaccg
     2161 acgatgaatc ctcccagcgc cccttcacct gcggtgtaac ccagaaactc gtccggattt
     2221 gcgctggcta ctcctattat tgccatcgtt gatgacccga ttgcggagcc gataagtagg
     2281 ttgtgcccaa ctgaatgctt tgttcttatc gatccgatgt cgcgtacaag gatatttgtc
     2341 ggttctcgta ttaattgtac agatgtgtca gtggctgaaa gcacatgccc ccgtgcgatc
     2401 gtatgtccct tcaaatcata aactcgtatg aatattgact tttgggcctc gagattatga
     2461 gcaatcaaaa tggtgaaaag gaatgcaagt attttcataa acaggatttt tagttgccga
     2521 aattttgaaa attgtttgtg attacgacgg ttttagtatt tattcagtgg gcgacattaa
     2581 tttgggccag atgttggttg ttcagttgtt tgtcatggta ttttagacct aaatgccttc
     2641 cacttctcgg ggtcgccatt aatcaaagaa tgttttgagt ttttgaaagg aatcgtcagc
     2701 gcaccaaaga cagcgcctag cagtgtacct acaggcgccc agtacgcggc tccttcagcg
     2761 ggtgtgtccg tatcaccgtt aatggctcct aacacggcga aagtagttgt gccgattatc
     2821 gaaccaacaa gcatgttgtt tccggctgag tgcttagttc ttatggaacc aatgttacgt
     2881 acaagaatac tcgtcgtttt ctcctttaac tgcaaagatg tgtcagtcgc tgaaagcaca
     2941 tgaccccgtg cgatcttatg tccttccaga tcataaactc gtatgaatat tgacttttgg
     3001 gcctcgagat tatgagcaat caaaatggtg aaaaggaatg caaggatctt catacgggca
     3061 agttttggtt tgcgaaagtt gttggtcatc gatgagatga ttgatatgaa gatcggccaa
     3121 ttgaatgata tatggtagta aatttttacg tggttcgtct gacttgcaaa aacggcgcac
     3181 cgaacgttta tatatacaaa catcccgggt ggtttgacac ccgggaatgc taaattctaa
     3241 aatctgccca cattcatctt tgaacgggct caatgcaaca tccccgtcat gttgtttaac
     3301 actgcggaag actcattgat gtaccacttt gttttctctg tcgatataaa atgtcttatt
     3361 gcctttcatc acggatgctt ccccattggt gaagctgtcg gcgaaatcgt actgcgggtt
     3421 aatgaccgtt ttgccactgc catccacgta accccacaga ttgtgtgaat tggctatcgg
     3481 tgcaaggcct tccgaaaagt cgcgtgcatt gctgaattga aaatcgatcg cgactttgcc
     3541 ctgcacatcg atgtacccgt aatgaccatt cctcattaca gcagcaagcc cgttatggaa
     3601 attttgtgca tcttcaaatt ttgcatcgga caattgtttg ccggagctgt cgagaaagat
     3661 ccatgtgctg ccgctgcgca cggctgtaaa accttcgctg aatgtgagac cttcatcata
     3721 catcaggggt atgattattt ttccgttgtt atcggtataa cctaccttat tgtcctttcc
     3781 taccttggca agaccgcaac tgcattggtc cacgaagtcg tagttctttg cccacttttg
     3841 ggcatcagcg caaaacggta aagggaacat caaaagaagc aataaccgtt tcatacaagt
     3901 aaagttttat ggtaagagaa taatttccct tacaaggtac ttgtagaaat tgcgattttt
     3961 tatgatgacc gacagaggag aaactgatat tgcttagtaa attgaaagaa cgtattgtgc
     4021 cattaaagtt gagtcaaagg atggcgatcc ttgcaataaa atagtgtcca ggtttcatga
     4081 atggcacccc acgtcttgga aggaaaaatt gatttcgatt tcaattcggg tggaaagatt
     4141 tatttattgg cctctaaaat tgcttacgcc agatgcccgg tccggcatga cggcggcgtc
     4201 gttgccatat gttccgccaa ctgcggcgtt ggcgtttggc caatcgggcg attctatcgg
     4261 gcttacgcgg atggcggagt tgtcagttct tgcgtggata tctcctcaag cacgatccgc
     4321 tctttttcta tcgcaagccg gtgtttgaca ccaaccttca acgcgtaatt ttttccagta
     4381 tggccgactg gaaaatcaaa acaaattgga aaattatatt cactgacctt gttcaaaatc
     4441 aaatcctgca catcctggcc aaacgcaata gtagtgtctt tgatctcggt gaaactcccg
     4501 atgatcaaac cagatatggc tgagaatttt ccggcacgtt ttaattgcat caacatgcga
     4561 tcgatattgt acttgtattc accgatatcc tcgaggaaca ggatcctgtt cgttgtgtcc
     4621 ggatccgaat ctgtaccaat gatatgtgca agcatggaga gatttccgcc gatcaattct
     4681 ccttccgcaa taccgtgttt atttaaatca tgcggtgcga gctgataacg aagtttcgtt
     4741 cccgtcaagc aataaaggat cgattcaagg tattcacggt cttcatcgaa ttcattgaac
     4801 gccgctgcca taggcgcatg caatgacgcg atacggaaat tcgaataaat gtgtgcatga
     4861 aggagcgtaa tgtcactata accaatgatc catttcgggt tatcgacaaa
//
LOCUS       DASQJI010000115         5298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_316086,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000115 DASQJI010000000
VERSION     DASQJI010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5298
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316086"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VEV83_03550"
     CDS             <1..586
                     /locus_tag="VEV83_03550"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44216.1"
                     /translation="NEGIASGCNMNSCSVVTTGIEMNDANEKSKIAIIVYDNKGNIDS
                     IPHTSAGYIDTSFYGDEYEAGYAALYDNDAVYVAGKAGDKNQNDFLLIKAILETSPAK
                     KIKPLPADYSLKVYPNPAHGSITLNYTLAQPAMIRFELTSLNGNQTFQLLQRASAAGA
                     QQATMRLPLNIAKGVYTLKMVSKEGVSMRMVVVE"
     gene            complement(1015..2505)
                     /locus_tag="VEV83_03555"
     CDS             complement(1015..2505)
                     /locus_tag="VEV83_03555"
                     /inference="COORDINATES: protein motif:HMM:NF015615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44217.1"
                     /translation="MQNADTTTPINLKEMKYLGSVNERYQSYNVEMAEVVGGRFWRPY
                     KTMDSLPSSGSSFDFSSEQMFRKLPPVNLSDKRLMNLAKALAPAYVRVSGSWTNTVYF
                     QDNDTPQTKAPEGFVNTLTRSEWKGVIDFIKATDSKLITSFAVSTGVRDSAGIWTPKE
                     AEKILNYTNSIGGKIAGAELFNEPTIPIAGGVDTNYNAGNFAKDVAVFKTWAKKEVPD
                     MLLIGPGSTAEGIPGQSFETLMKHFLSTDSLMSAEPKPLFDIFSYHYYGAVSMRVMRS
                     GPFSIKPENALNAEWLQRTEAVADYYIGLRNKYNPGKPLWVTETAEASAGGDPFAATY
                     LDCFRYLYQLGSLAKKGVQVVMHNTLAASEYSLIDQDTHLPKPDYWAALLWAKLMGTK
                     VYEAGTGMPGVYLFAHSMKGSSSGMTLLVLNTNKESTKINIPSRGEQYTLTSDALQSD
                     KLQLNGQDLKLNDDMLPTIKGKKTNAGNIELPSASITFITFENAGK"
     gene            3391..3795
                     /locus_tag="VEV83_03560"
     CDS             3391..3795
                     /locus_tag="VEV83_03560"
                     /inference="COORDINATES: protein motif:HMM:NF025032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4923 family protein"
                     /protein_id="HYK44218.1"
                     /translation="MRKILFFLLTGGIILAGCSKDTENNASIVGTWNVNMITSQVFLN
                     NVLQGSDTTTEGSVEFDSDGSFTSTDSGGPTTGTYNYNTSSKELTVISGGDTSHATVT
                     NLTSNNLHFQQDETQTIGGATVRVTTDADYSR"
     gene            complement(4053..4604)
                     /locus_tag="VEV83_03565"
     CDS             complement(4053..4604)
                     /locus_tag="VEV83_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44219.1"
                     /translation="MKYIATKQHVLNRGVPPDDFLDQLVAWGKQAADEIFAENAHSDI
                     YSSVKNTLGPWRDLKHRRAVMLEVMRVLAGFESSWKWNEGRDITNSTSVTPETIEAGA
                     WQVSANSMNFGQELKDLVLRDVGTLDGNDFQKAMKQNHTLAMEYIARLLRRTTKHNGP
                     VARHEIDPWLRRDAVDEFERLLI"
     gene            complement(4748..>5298)
                     /locus_tag="VEV83_03570"
     CDS             complement(4748..>5298)
                     /locus_tag="VEV83_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44220.1"
                     /translation="DIDSSKLKTLLMKLISRLFFVMVLLVVFQTGDVFGQLTGANIAA
                     HGVLALVGGDKEAKQEKIIDQSTTQEKISGSNVNVLRVKESDIKSKAKAHIIALQNRL
                     DQYHLQYENNQPIDIPKNDSDLIAIMDKDENWPTQYYAGELKAYKRYAFQQKQKTPAA
                     PADSLNIMHTEPIIKDTTGAKL"
BASE COUNT         1535 a         1114 c         1062 g         1587 t
ORIGIN      
        1 taatgagggc attgcctcag gctgtaatat gaatagctgt tcggttgtca caacaggcat
       61 cgagatgaat gacgcaaatg agaaatctaa aattgcaatt atcgtgtatg ataataaagg
      121 caacatcgac agcataccgc acacatcggc aggttatatc gatacgtctt tttatggtga
      181 tgaatacgag gctggctatg cggctttgta tgataacgat gcggtgtatg ttgcgggtaa
      241 agccggggac aaaaaccaaa atgacttttt attaataaaa gccattcttg aaacttcacc
      301 tgcaaaaaaa attaagcctt tacctgcaga ttattctttg aaagtttatc ccaatcctgc
      361 gcacggttca ataaccctta actatacact tgcacaaccc gcaatgataa gatttgaatt
      421 aacttctctc aatggaaatc aaacttttca gttgttgcaa cgggcatctg ctgcaggtgc
      481 acagcaagcc acgatgaggc tgcccttaaa tattgcgaag ggagtgtaca cattgaagat
      541 ggtttctaaa gaaggagtga gtatgaggat ggttgtggtg gaatgaaagt taatagactg
      601 cggcactgag caacagtctg ttttagcgtt cgtgaacagc ccaatcaagt tccgaacgat
      661 gaagtgattg cgacgcaaca gccgatgcca taaaaaactg cagctggtat ccaaaaaatt
      721 cttcttcccc aaaaagttgt ctccattttt aatgtaaaaa aatgctccta ttgttcccgc
      781 acgacgacat gtttttggtc gtagcagggt cttcatttca gctcggcgaa gtgttcggtg
      841 tctcggcaaa gtttgcaact tcgctgcatc tatattaaag attgtaactt ttattcagta
      901 ccaacaacaa aagaagaagt ttaaaacttc agtataaaac aagcgtagtt gcaaacttcg
      961 cttagttcct gttcagtcaa cagcaggtta tttcgaagct aattcaatta aacattattt
     1021 cccggcattt tcaaatgtaa tgaaggtgat acttgcagaa ggtaattcta tatttcctgc
     1081 atttgttttt ttgcctttta tagttggcag catatcatca ttcaatttta gatcttgtcc
     1141 gtttaattgc aatttgtcac tttgcaatgc atctgacgtt aaagtatatt gctcaccacg
     1201 ggagggaata ttaattttag ttgattcttt attggtgttg agcactaaaa gtgtcatacc
     1261 actactactg cctttcatgc tatgtgcgaa taaataaact cccggcattc ctgtaccggc
     1321 ttcataaact tttgttccca tcagtttagc ccacaataac gctgcccaat agtccggttt
     1381 gggaagatgt gtgtcctggt caatgaggct gtattcactt gcagcaagtg tgttgtgcat
     1441 aacaacctga actccttttt tagctaaaga gccaagctga tataaataac gaaaacaatc
     1501 caaataagta gcggcgaaag gatcgccccc tgctgaagct tctgccgttt ctgtaaccca
     1561 taaaggttta ccgggattat atttatttct taaaccgatg taataatcag cgaccgcttc
     1621 tgttctttgt aaccattcag cattgagtgc attctcaggt ttaattgaaa acggaccact
     1681 cctcatcacg cgcattgaca cagctccgta ataatgataa gaaaaaatat caaacagcgg
     1741 tttgggttcg gctgacatta gggaatctgt tgaaaggaag tgcttcatta atgtttcaaa
     1801 ggactgaccg ggaattccct cggcagttga accgggacca ataagcaaca tatcgggaac
     1861 ttcttttttt gcccatgttt taaaaacagc tacatcttta gcaaagttgc cggcattata
     1921 attcgtatct acacctcccg cgataggtat ggtaggttca ttaaaaagtt ctgccccggc
     1981 aatttttcca ccaatactgt ttgtatagtt tagaattttt tccgcttctt ttggtgtcca
     2041 aattcccgcg gagtccctca caccggtaga gacagcaaat gaagtgatca atttagaatc
     2101 ggtagctttt ataaaatcaa tcactccttt ccattcgctc ctcgttaatg tatttacaaa
     2161 accttccggt gcttttgttt gaggagtatc gttgtcttga aagtacacag tgttggtcca
     2221 cgaaccgctt acgcgtacat aagcaggtgc aagcgctttg gctaaattca tcaatctttt
     2281 atcggaaaga tttacgggag gaagttttcg aaacatttgt tcgctcgaaa agtcgaagga
     2341 tgatcctgaa gatggaaggc tgtccattgt tttataaggt ctccagaatc ttcctcccac
     2401 tacctcagcc atctccacat tataggattg ataacgttca tttacgctac ccaaatattt
     2461 catttctttc aaattgatcg gcgtagtggt atcagcattt tgcaaagtgc tgtggttatt
     2521 agctaaactc gatcctctaa agtttagcat aaagaagtta agcattatac atatcgaagc
     2581 aattttcata agaaatcaat ttaaagaaga agtggtttta cttggctgat aacataaagt
     2641 tagatttcaa atctctgaac aaaaaatcag aacgtttata ccccacctcg gtgaagtgtt
     2701 cggtgtctcg gcaataaaca aaacatttta ttcctactcg ttatgaagaa ttgcagtaaa
     2761 cgcagggtct cggggctgca caataccgaa tacgaagacc ctgctaagac aaaataaaac
     2821 tagacggttg caaactaatg ttcctggttg tttttagttc tgcaattaga atctgttctt
     2881 agaatcgtat taaatgagac ataagcaagt ctactatagg atttagtcgg tgcttcgttc
     2941 tcaatgaaac acttggcaca aacaaatagg tcaggcattt ataaagattc gcctcatttt
     3001 tagcgtatgg ccgtttctag agaagatcat gctcaatcaa ccttccgaac gatgaagtga
     3061 ttgcgacgca acagacgatc ccataaaaaa ccacagctgg tatccaaaaa atcctcgtgt
     3121 gtaagcaagg ccattggaca taatttggcg gcaatgaatc ggggcgccgg ggttatgcgg
     3181 agcttcgctg caacaggact tattgatgaa taccgtgcat ctaaaacgac cggatgtgta
     3241 attgcgtctc ccggatcgga gttcggttgg ctctccgtat taatgtaaaa aaatgttgct
     3301 attgttcccg cacgacgaca tgttcaccta attaaacaat aaaaagcata atgccttcgt
     3361 ttgcttagat taaagatcaa ccttttattt atgcgaaaga ttttattttt cctattaacc
     3421 ggcggaataa ttttagccgg ctgcagcaaa gacactgaaa acaatgcaag tatcgtgggc
     3481 acctggaacg ttaatatgat aacttcccag gtttttttaa acaatgtgct ccagggaagc
     3541 gatacaacaa cagaaggcag tgttgaattt gacagtgacg gaagttttac ttccaccgac
     3601 agcggaggcc ctactacagg cacttataat tacaacacat caagcaaaga attaactgtt
     3661 atatcaggtg gtgatacaag tcatgcaact gtaacaaacc taacatccaa taacttacat
     3721 tttcaacagg atgaaactca gacaataggt ggcgctaccg ttagagtaac aacagatgca
     3781 gattatagca ggtaacccca gctctccttg aaatataaga gcacatgttt gttgtgtatt
     3841 tcgccgtcaa gcatcatctc tcgtagaggc tctttcagga gacgatgctg gacatacaat
     3901 tatcctgtat acgctttacg gagttaaggg atattaatat gacgaaatca agttaattta
     3961 ccgaatgtcc ttcctataga aaaggcaagg cagagaaaca ttcggagaag aataggaaca
     4021 aaggcgggag tggcttctcc attataccga tatcaaatta aaagtctctc gaactcatcg
     4081 acggcatccc ggcgtagcca tggatcaatt tcatgcctgg cgaccggccc attatgctta
     4141 gtggttcgac gcagcagcct ggcaatatat tccatcgcca gcgtatgatt ctgcttcatt
     4201 gctttttgga aatcattacc atcgagtgtg ccgacatctc tcagcacaag atctttgagt
     4261 tcctgcccaa agttcattga gtttgcgctg acttgccatg ccccagcttc gatagtttcc
     4321 ggcgttaccg aagtcgaatt ggtgatatcg cggccctcgt tccatttcca cgatgattcg
     4381 aagccggcaa gaacccgcat tacttccagc atgactgccc ggcgatgctt gagatctctc
     4441 cacggcccaa gtgtgttctt tacactcgaa taaatatcgc tatgagcgtt ttccgcaaat
     4501 atctcatcag cagcttgttt tccccaggcc acgagttgat caagaaagtc gtcaggtggc
     4561 acgcccctgt taaggacatg ttgttttgta gcaatgtatt tcatatttat tactcccttc
     4621 tttttatcgg aattctactg ccgaaaggtc gccacatcaa attttaaaac acatttacgt
     4681 gtttatgctg cgcagccacc tctttgaccg acgagcaacg aacagcaatt catcggcaaa
     4741 aatcaactta taattttgcg ccggtagtat cttttattat cggttcagtg tgcatgatgt
     4801 ttaagctgtc agccggtgca gcaggcgttt tttgtttctg ttgaaaagca tatcgcttat
     4861 aagcttttaa ttcgcctgca taatattgag ttggccagtt ttcatcttta tccataatgg
     4921 ctatcagatc gctgtcattc tttggaatat caatcggttg attattttca tattgaaggt
     4981 gatattgatc taaccgattt tgcaacgcaa taatatgggc tttggctttg ctttttatgt
     5041 ctgattcctt tacgcgcaag acgtttacgt ttgatccgct tattttttcc tgtgttgtgg
     5101 attgatcaat gattttttcc tgttttgcct ccttatcacc gccgacaagt gctaacactc
     5161 catgggctgc aatatttgca ccggtcaatt gaccaaagac gtcccccgtt tgaaaaacaa
     5221 caagcaatac cataacaaaa aaaagcctgc ttattagttt cattaaaagt gttttaagct
     5281 ttgatgaatc aatatccc
//
LOCUS       DASQJI010000116         3327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1237276,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000116 DASQJI010000000
VERSION     DASQJI010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237276"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VEV83_03575"
     CDS             <1..402
                     /locus_tag="VEV83_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44221.1"
                     /translation="IPQDIGRVLLNLYNNAFYAVSEKLAAQGSLLTAQDSELEAKDRR
                     YLPTVTLVTKKSSNKIEITVKDNGPGIPQNIVDKIFQPFFTTKPTGQGTGLGLSLSYD
                     IIKAHGGEIKVKTKEGEGSEFEIKLPANEDI"
     gene            448..>3327
                     /locus_tag="VEV83_03580"
     CDS             448..>3327
                     /locus_tag="VEV83_03580"
                     /inference="COORDINATES: protein motif:HMM:NF019136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK44222.1"
                     /translation="MKRLLQFFGFLFSPFLCFSQDLHFTLVPRSQDDIGSVIIAVTQD
                     SKGYLWFATQNGLYKYDGVQYTAYHNQPTNPNSLILENVECVAEDKHGFIWVGHYHSA
                     SGLERLDPATGIFTHYHHDEKNASGLGNDSITVIMQGRDGTLWIGTNDGLDRYDDKTN
                     KFFHYRFNKNDSTSISSNQVRVVYEDKEGTIWVGCGNPFIGENPKHEGGLNQMDVKTG
                     KFKRYMHKENDPNSLMDDRVRAIYEDNHGNFWVGSAGDGLHKMDRKNGTFQRLLYDPA
                     HPEKLSRPPVQKTFEYATDHITFITEDINGLLWIGTFQGGINVYDPAAQKVTYYGIER
                     NSKEILQDKNFWTAYKARDGIMWLTTWGGDLYKINPFQVKAPYTQLGKPCYAFAEDNV
                     NTLWMATSYGLLSKDSSGKLQQFLIDKDTVSVNNLINELEIDEDNRIWTATNHGLYYF
                     DPVKKSFTRFHAGKEGRISLLSDTIITIKKNKQNQLWLGTYKGLELIDIKKGTLKVYK
                     NDPKDSTSISSNIISFVNEDSKGNVWVGCFNGLNRLDKQTGHFKKFINQNRIFQVYED
                     KERDSWAATEKGLFRYDSSTDNFIQYTRESGILNGSQPILWILEDQDKNFWLNTLRGI
                     VKLNKEKDEEVLFGKNQGVNGASLGYKGFTRRNGDMLFTEYSGFFTFNKKLLQQNSSL
                     PIINITNFLLKDIPVQATEHGILSIPIEQTKEIHLAHDQNTFSFEFSNIDFISQHEDT
                     RLLYKLENYDISWHMATESRNAYYFNLPPGHYNFKVKAFSANGASAEKEVSIIITPPW
                     WKRWWAYCMYAILLFVLGFFIHRYQKESVIKAERERTRAKELAQAKEIEKAYHELRTT
                     QAQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNGELVDELKLQLAAGNLQLAT
                     EIADGLKENENKILHHGRRADAIVKGMLQHSRANTAKKEPTDINAL"
BASE COUNT         1161 a          612 c          685 g          869 t
ORIGIN      
        1 ataccacagg acattggaag ggtgctattg aacttataca acaatgcatt ctacgcggta
       61 agcgaaaagc tcgccgctca aggctcactg ctcacggctc aagactcaga gctcgaagct
      121 aaggataggc gctacctccc caccgtcact cttgtcacga aaaaaagtag caacaaaatt
      181 gaaataactg taaaagacaa cggccccggc attcctcaaa acatcgttga taaaattttt
      241 cagcccttct tcacgacaaa accaacaggc caagggacag gattaggttt gagtttaagc
      301 tatgatatta taaaagcgca tggcggagag ataaaagtga agacaaagga aggggaaggg
      361 agtgagtttg agattaaact gcctgctaac gaagacattt aatatgtata ctaaacaaat
      421 gaattatctt ttatcaaact aactgtcatg aagagattgc tgcaattttt cggatttttg
      481 ttctctccgt tcctttgttt ttctcaggat ttacatttta ctctggtacc ccgatcgcaa
      541 gatgatattg gctctgtcat cattgccgtg acccaggact caaaaggata tttgtggttt
      601 gccacgcaaa acggcctgta taaatatgat ggtgtgcagt atacggcata ccataaccaa
      661 cccaccaatc ccaattctct tatccttgaa aatgttgaat gtgttgcaga agacaaacac
      721 ggttttattt gggtaggtca ttatcatagt gcatcgggtc ttgaaaggct tgatcctgcc
      781 accggcattt tcacacatta tcaccacgat gaaaaaaatg cctcaggtct tgggaatgat
      841 tccataacag ttatcatgca aggccgtgat ggaacattat ggataggaac aaatgatggc
      901 ctggacaggt atgatgataa aacaaataaa ttttttcact accggtttaa taagaatgat
      961 tcaacttcaa taagcagcaa tcaggtaaga gtcgtttatg aagacaaaga gggaactatt
     1021 tgggttggtt gtggaaatcc atttataggt gaaaacccaa agcacgaagg gggcctcaac
     1081 caaatggatg taaaaacagg aaaatttaaa cgctacatgc acaaagaaaa tgacccgaat
     1141 agtttgatgg atgacagagt aagggcaata tatgaagaca atcatggaaa tttttgggtt
     1201 ggctcagcag gagatggctt acataaaatg gacaggaaga atggtacatt tcaaagatta
     1261 ttatacgatc cagctcatcc cgaaaagcta agccggcctc ctgttcaaaa aacatttgaa
     1321 tatgctactg atcatatcac ctttattaca gaagatataa atggacttct ttggatcggc
     1381 actttccagg gaggcatcaa cgtatatgat cctgctgcac aaaaagtaac gtattatggt
     1441 atcgaaagaa acagcaaaga gatacttcag gataaaaatt tctggacagc ctataaagca
     1501 agagatggaa taatgtggct taccacatgg ggcggcgact tatataaaat aaatcctttc
     1561 caggtaaaag cgccatatac acaacttggt aaaccttgtt atgcctttgc ggaagacaat
     1621 gtaaatactc tatggatggc cactagttat ggcctgctga gtaaagacag cagtggaaaa
     1681 ttacagcaat tccttattga taaagatact gtatcagtta ataatttaat taacgagtta
     1741 gaaatagatg aagacaaccg catttggact gctaccaatc atggcttata ctattttgat
     1801 cccgtcaaaa aaagttttac caggttccat gcgggaaaag aaggtcgtat aagtttgctt
     1861 tcagacacta tcatcaccat taaaaaaaat aaacaaaatc aactttggct gggcacttat
     1921 aagggattgg aattaattga cataaaaaaa ggaacattaa aagtatataa gaacgaccca
     1981 aaagattcaa ccagtatcag cagcaatata ataagttttg ttaacgaaga cagtaagggt
     2041 aatgtatggg tgggctgctt taatggatta aacagactcg ataaacagac aggccacttt
     2101 aaaaaattta tcaatcaaaa ccgcatattc caggtttatg aagataaaga acgtgactca
     2161 tgggcagcca cagaaaaagg acttttccga tacgattcat caaccgataa ttttattcag
     2221 tataccaggg aatctggcat tttaaacggc tcccagccaa tattatggat tttggaagat
     2281 caggataaaa atttttggtt gaataccctt agaggaattg taaaactgaa taaagaaaaa
     2341 gatgaagagg tactttttgg aaaaaaccag ggtgtaaatg gtgcatctct gggttataaa
     2401 ggatttaccc gacggaatgg agatatgtta tttactgaat attccggttt tttcactttt
     2461 aataaaaaac tgttgcagca aaattcttca ctgcctatca taaacataac taatttttta
     2521 cttaaggata taccagtaca agcaacggag cacggaattc tttcaatacc aatagaacaa
     2581 acaaaagaaa tacacctggc gcatgatcag aatacttttt catttgaatt ttcaaatatc
     2641 gattttataa gccagcatga agatacccgc ctgctctata agctggaaaa ctatgacatc
     2701 agctggcata tggccactga gagccgtaat gcgtattatt ttaatcttcc tcccggccat
     2761 tataatttta aagtaaaagc atttagtgca aacggagctt cggcagaaaa agaagtctcc
     2821 atcatcatca ctccaccctg gtggaagcgg tggtgggcat attgcatgta tgctatattg
     2881 ctatttgtgt taggattttt cattcatcgt taccagaaag aaagtgtaat aaaagccgag
     2941 cgtgaaagaa caagagcaaa agagttggcg caggcgaagg aaattgagaa agcataccat
     3001 gaattgagaa caacgcaggc tcaactcatt caatcagaaa aaatggcttc gcttggtgaa
     3061 ctaactgctg gcattgcaca tgaaatacaa aaccctttga atttcgtcaa taatttttcg
     3121 gaagtaaacg gggagctggt tgatgaattg aaattgcaat tagcagccgg caacctgcaa
     3181 ttggcaaccg aaattgcaga tggcctgaaa gagaatgaaa acaaaatcct tcatcatggc
     3241 aggcgggccg atgcgattgt taagggcatg ctgcaacatt caagagcaaa cacggcgaaa
     3301 aaagaaccga ctgacatcaa tgcactg
//
LOCUS       DASQJI010000117         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_469939,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000117 DASQJI010000000
VERSION     DASQJI010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469939"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(624..>1578)
                     /locus_tag="VEV83_03585"
     CDS             complement(624..>1578)
                     /locus_tag="VEV83_03585"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HYK44223.1"
                     /translation="KEKVRVIMPDTGSGYGGKHKGDAAIEAARLAQEAKKPVKIVWSR
                     EEEFVWAYFRPGGVIEVSAGVNRDGTITGWKFNNYNSGGAGLETQYKVSNQQIAHLPS
                     DTPLRQGSYRGLAATANVFARECSMTDLARLINMDQLAFRLKDLEDDRFIAVLQAAAK
                     AFNWNGSKPAGHGYGIAGAFEKGGYVGCCAEVMISTDKEVKIVRITQAFDCGAIVNPH
                     HLETQAMGSIIQGLGGALFEAVKFADGKILNHRLSAYRVPRFSDVPKIEIVLIDRKDM
                     PSSGAGEACIVGVAPAIRNAIVDATGIGLSTLPMLPNGVLV"
BASE COUNT          444 a          390 c          313 g          431 t
ORIGIN      
        1 tgaggaaacc tgctcctaaa aaagccgctc ctaagaagac tacaaagaag gcagcaaaaa
       61 aagcagcacg ttaattttat ttgcaattac tgcacctgcg ccgagaacgt caagcgtcgt
      121 ctctttcagg aactcgctac ataggacaat gcgatatttg cgagaaatag attttattaa
      181 caggtgcact aaaaataact gaatcaaaac ctgcatattt gttccgacct ctctcagata
      241 aggtgaataa ggttgctgaa gccacgccgg tattttcaac taaggtttaa aggccaaata
      301 gaataaagtt ttaacgcaga tcgcttcaaa tcttgtcgaa acatgcaaca agtttgtaaa
      361 caggaacagc ttcaaacttt ggtaaaagga ttcaacaatt tttgggcaac cttattaacc
      421 ttagtagaag atccaacgat tttttgaacc aaccttatta accttatcat ttgctcgcag
      481 cgcccgatgc gatatttcta cgtaataatg tttttacgta aaacgagggt tactaaaatt
      541 gaacactgat tattgatccg ttgaacattg agtgtttttt gaaaatcttg aattgaccat
      601 tcaccattca caattcacat tgctcaaacc agcactccgt taggcaacat aggcaaagta
      661 ctcaggccta tgcccgtggc atccacgatc gcattgcgga tcgcaggcgc aacaccaaca
      721 atacatgctt cacctgcacc ggaagatggc atgtctttcc gatcaattaa aacgatttca
      781 atttttggta catcactaaa gcgcggaacc ctgtaggcag aaagccggtg attaagaatt
      841 ttaccatctg caaacttcac cgcttcgaat aaagcgccgc caaggccctg gataatagaa
      901 cccatcgcct gggtttccaa atgatgcgga ttaacgatgg cgccacaatc aaatgcctgt
      961 gttatacgaa cgatctttac ttctttatcg gtacttatca ttacttcggc gcaacagccc
     1021 acataaccac ctttttcaaa agctcctgct atgccataac catgaccggc gggtttggag
     1081 ccattccagt taaaggcttt ggcagctgcc tggagaactg cgataaaacg atcgtcttct
     1141 aaatctttta accggaatgc aagttggtcc atgttgatca gtcttgccaa atcggtcatc
     1201 gaacattccc gcgcaaatac gtttgcggtt gcagcgagtc cgcggtatga accttgtctt
     1261 aatggtgtgt cggaaggaag atgtgctatt tgctggttac tgactttata ttgcgtctcg
     1321 agccctgcgc cgccggagtt gtagttatta aacttccagc cggtgatggt gccatctcta
     1381 ttaacgccgg cgctcacttc aatcacgcca cccggcctga aatatgccca cacaaattct
     1441 tcttctcttg accacacaat tttaaccggc ttctttgctt cctgtgcaag gcgtgcagcc
     1501 tcaatcgcgg cgtcaccctt gtgcttccct ccatagcccg acccggtatc gggcattatt
     1561 acacgcacct tttcttta
//
LOCUS       DASQJI010000118         4717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2159076,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000118 DASQJI010000000
VERSION     DASQJI010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4717
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2159076"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1975
                     /locus_tag="VEV83_03590"
     CDS             <1..1975
                     /locus_tag="VEV83_03590"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44224.1"
                     /translation="QQESSADSLRRELVSAKEDTNKVWVLINLGAIYQWSYPDSGILY
                     AQEALRLAQKLNFTTGEINANGVAVEAFSGKGNYPKALEASLKQLELSEKSGDSTNIV
                     WAYVDIGSVYYYSDDYERALYYYNKLKLNHAIFLQNQKLFSGFLGEAYFHLNQVDSAL
                     YYINMCYGLDLKSEHHWSIPYFYLGEIYFQKKEYASALDFYRRGINISIEKLDLLDGY
                     IGIAGIFKKLNLVDSAVYFARRAIDVVHDGSFPSKIVKAAKILTDIYTTSRVTDSALR
                     YMQIMMVAKDSLFNQAKQNLYFNEQTHQQELQQKIEQEQSANRNRQNIIILLSGLTIV
                     LVVAIGLWRKNIYKQKSYTVLQKQKHEIDIQKEKVEHTLEDLRTTQAQLIQSEKMASL
                     GELTAGIAHEIQNPLNFVNNFSEVNRELIEDVEGERSKLNGERDEELETALLSDIKQN
                     TEKIIHHGKRADAIVKGMLQHSRANTAKKEPTDINALADEYLRLSYHGMRARDNSFNA
                     TLQTDFDNSIGKINVVPQDIGRVMFNLINNAFYAVCAKVSATADAVSEKLVDPSSQLA
                     ATSAPYVPTVAVVTRKLSDQIEIRVSDNGPGIPQTIVDKIFQPFFTTKPTGQGTGLGL
                     SLSYDIIKAHGGEIKVETKEGEGAEFILQLPLM"
     gene            2069..4111
                     /locus_tag="VEV83_03595"
     CDS             2069..4111
                     /locus_tag="VEV83_03595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44225.1"
                     /translation="MQSCPQDYHVIDSLKMLLLNGGAQDTNTVRLYLQLGNKYTWNKP
                     DSAIYYHNQALLLSKRLHFTDGEFQALTLKPFPLAIARSDSDAVSCAYRAVKIAEDEN
                     NSDYLSSAYFTLGSVYMYIQEFNKGIMYHRKALSYMSSKDSELIADCNEHFAQCFLGL
                     HQTDSAFYYAKKVYGYNQQHKRQIGFDIYQMGSAYFQKGNLDSALKYYKEALQVGVSS
                     EKNAFKKDIADCNIGIANVFQKKNAPDSAIFYAKNALDIANGTGLSNEKIEALNLLTI
                     LFDSQSKIDSAYIYQKYASALKDTVYNSDRIRQVQLLSFNEDMNRQQLVEQQEKRINT
                     IIIFSLIGALLSSLAIAVIIFKNGKQRKKAYALLQKQKHEIDLQKTKVEQTLTDLKAT
                     QDQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNGELVDELRAQLATGNLQLAT
                     EIADDLKDNEAKILHHGKRADAIVKGMLQHTRTSTGQKEPTDINALCDEYLRLSYHGM
                     RAKDKHFNAQLETNFDGSIGEIKVVPQDMGRVLLNLYNNAFYALSQKLAARGPELDAN
                     SAPYVPTVTLVTKKLDEKIEISVKDNGAGIPSNIVDKIFQPFFTTKPTGEGTGLGLSL
                     SYDIIKAHGGEISARSGGKVQTKESAGLTAGLSDEATAKFEAAPQAGSEFKILLPV"
     gene            4217..>4717
                     /locus_tag="VEV83_03600"
     CDS             4217..>4717
                     /locus_tag="VEV83_03600"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44226.1"
                     /translation="MKLRSWLLLALICSTIIAHAQNHEIDSLKNLLKTAEDINRVNVF
                     ENLSYAYLSSSADSALKYALDGLQLAKDINSPKGEAICLDALGNVYFHIGDNAKALEY
                     YLEYMKLKEELKDLDNISVAYYNIAGVYVEDQDYKHALFYLFKAKDVDEKAKDSSALL
                     YDNYSLA"
BASE COUNT         1568 a          923 c          971 g         1255 t
ORIGIN      
        1 acagcaggaa agttctgctg atagtttacg gcgtgaattg gtttcagcaa aagaagacac
       61 caataaggta tgggtattaa taaacttagg cgccatttat caatggtcat acccggatag
      121 tggtatttta tatgcgcagg aagctttaag attagcacaa aaattaaatt ttaccaccgg
      181 agaaatcaac gctaatggcg tagcggttga ggcattttca ggcaaaggca attatccaaa
      241 agctttggag gcgagtttga aacagttgga gctttccgaa aaatcgggag attctacaaa
      301 catcgtttgg gcctatgtcg acatcggatc cgtttactat tattctgacg attatgaaag
      361 agccctatac tattacaata aactcaaatt aaatcatgca atttttctac agaaccaaaa
      421 actcttttcg ggctttttag gtgaagcata ttttcattta aatcaggttg attccgcact
      481 ttattatata aatatgtgct atggtctcga ccttaaatct gaacatcatt ggtctattcc
      541 ctatttttac ctgggagaaa tttattttca aaaaaaggaa tatgcgtcag ctttggattt
      601 ctatcgaagg ggcattaata tttcgattga aaaactggat ttgttagatg gctatatcgg
      661 tatagccggt atatttaaga aactaaacct cgttgattcc gcggtttact ttgcccgccg
      721 cgccatcgat gtcgtacatg atggctcttt tccttccaag atcgttaaag ccgcgaaaat
      781 acttacggat atttatacaa ccagtcgagt tacagacagc gccctcaggt acatgcaaat
      841 tatgatggtg gcaaaagata gtttattcaa ccaggcaaaa caaaatctct attttaatga
      901 gcaaacgcat caacaggaat tacagcaaaa aatagaacag gaacaatcag ccaatagaaa
      961 tcgacagaac attatcattc ttttaagcgg attgactata gtattggtcg tcgcaattgg
     1021 tctttggcgt aaaaatatat ataaacaaaa gtcatacaca gtacttcaaa aacaaaaaca
     1081 tgaaatagat attcaaaagg aaaaggttga acacacactt gaggacctca ggacgacaca
     1141 agcacaatta attcaatccg aaaagatggc ttcgctgggt gaactcactg ctggcatagc
     1201 acatgagata caaaacccgt taaacttcgt gaataatttt tctgaagtaa acagagagtt
     1261 gatagaggac gttgagggtg aaaggtcaaa gttgaatggt gaaagagatg aagaactgga
     1321 aaccgcattg ttgagcgata taaaacaaaa taccgaaaaa ataattcatc acgggaaacg
     1381 tgcagatgcg atcgtaaaag gcatgttgca acattcacga gcaaacacag cgaaaaaaga
     1441 accgactgac atcaatgcac tggccgatga atatttacgg ctctcttatc acggcatgcg
     1501 cgcaagggat aattcgttca atgcaacgct gcaaacagat tttgataata gcattgggaa
     1561 aataaatgta gtgccgcagg atatcggaag agtgatgttc aatcttatca acaatgcatt
     1621 ttatgccgtg tgcgctaaag tgtcggcaac ggcggatgcg gtaagcgaga agctcgtaga
     1681 tccaagctca cagctcgcag ctacttccgc gccttatgtc cccaccgtcg ccgtcgtcac
     1741 aagaaagcta agtgatcaaa tcgaaatacg cgtctcagac aacggcccgg gcattccgca
     1801 aaccatcgtt gataagatct ttcagccatt tttcaccaca aaaccaacag gccaaggaac
     1861 cggattaggt ttgagtttga gctatgatat tataaaagcg catgggggtg agataaaagt
     1921 ggaaacgaag gaaggtgaag gagcagaatt tatccttcag ctgcctttga tgtagtttgt
     1981 atatccggca ttctgaactt acataacttc ttagacgtaa ttctaaatga aaaacctact
     2041 ctttttactg tcattattat ttgttgccat gcaatcttgt cctcaggatt atcatgttat
     2101 tgacagttta aaaatgttac ttttaaatgg aggggctcag gatacgaata cagtgcggct
     2161 gtatcttcag ttgggaaaca agtacacctg gaacaaacct gattctgcca tttactatca
     2221 caaccaggcg ttgctgttat cgaaacggtt acattttaca gatggagaat tccaggcatt
     2281 gactttaaag ccatttcctt tagcaattgc tcgttcagat tctgatgcgg tatcctgcgc
     2341 ataccgtgca gttaaaattg ccgaagacga aaacaacagc gattatcttt caagcgcgta
     2401 ttttacttta ggctcagttt atatgtatat acaggaattt aataaaggca tcatgtatca
     2461 tagaaaagcg cttagctata tgagttcaaa ggactccgag ttaatagccg attgtaatga
     2521 acacttcgcc cagtgcttcc ttggtctgca tcaaaccgat tcagcgtttt attatgcaaa
     2581 aaaagtatac ggatacaatc aacaacataa aagacagatt ggatttgata tttaccagat
     2641 ggggagtgct tatttccaaa aagggaattt ggacagcgct ttaaagtatt ataaagaagc
     2701 acttcaagtt ggagtttctt ctgaaaaaaa tgcttttaag aaagatattg ctgattgtaa
     2761 tattggaata gcaaatgtgt ttcaaaaaaa gaacgctcct gattcggcta ttttttatgc
     2821 taaaaatgca ctggatattg ccaatggtac tggtttatcg aatgaaaaaa tcgaggcgtt
     2881 aaacttatta actatactct ttgactctca atcaaaaata gacagtgcgt atatctatca
     2941 aaagtatgca agcgcattaa aggatactgt atataattcc gataggataa gacaggttca
     3001 acttctttca tttaatgagg atatgaatag gcagcaactg gtggagcagc aagaaaaacg
     3061 tatcaatact attattattt tttccctgat tggtgccctc ctgtccagcc tcgcgatcgc
     3121 cgttattatt tttaaaaatg gcaaacaaag aaaaaaggca tatgcgcttc ttcaaaaaca
     3181 aaagcacgaa atagatcttc aaaaaacaaa agtggaacaa acgctaaccg atcttaaagc
     3241 cacccaggac caactcattc aatcagagaa aatggcttcg cttggcgagc tcaccgcagg
     3301 cattgcgcat gaaatacaaa atcctttgaa cttcgtgaat aatttttcag aagtgaatgg
     3361 agagctagtt gatgaattga gagcacaact ggcaaccggc aacctgcaac tggcaaccga
     3421 aattgcagat gatctaaaag ataatgaagc taaaattctt caccacggca aacgcgccga
     3481 tgcgatcgtg aaaggaatgc tacaacacac gcgcacaagc acgggacaaa aagagccaac
     3541 agacattaat gcattgtgtg atgaatattt gcgattgagc tatcacggca tgcgtgcaaa
     3601 agataaacat ttcaatgccc aactggaaac aaattttgat ggcagcattg gagagatcaa
     3661 ggtcgttccg caggatatgg gaagagtgtt attgaattta tacaacaatg cattttacgc
     3721 cctaagccaa aagctcgcag ctcggggccc agagctcgac gctaatagcg ccccttacgt
     3781 cccaaccgtc acccttgtca caaaaaaact ggatgaaaaa attgaaataa gcgtaaaaga
     3841 caacggcgcc ggcattcctt caaacattgt cgacaaaata ttccagccat tttttactac
     3901 caaacccacc ggcgaaggaa caggtttggg gttaagtttg agctatgata ttattaaagc
     3961 acacggtgga gaaatatccg cacgatccgg tggaaaagtg cagacaaagg aaagtgccgg
     4021 cctaacagcc ggtttatccg acgaagcaac agcgaagttc gaagctgcac cgcaagcggg
     4081 aagcgaattc aaaatccttt tgcctgtttg atacgtgttc cttatgcgtc aaggaagatt
     4141 tgcaaattca caattaatat tgacgcagga aataattatt attgccgtgc taatgaaaaa
     4201 cgcacgcatt aaataaatga aactaagatc ctggttactt cttgcgctga tctgttcgac
     4261 catcatcgcg cacgcccaaa accatgagat cgacagcctc aaaaatttac tcaaaactgc
     4321 cgaagacata aaccgtgtca atgtttttga aaacctcagt tatgcttacc tgtcctcttc
     4381 ggctgattcc gcattgaaat atgcactgga tggcctgcag cttgcaaaag acattaatag
     4441 tcccaaaggc gaagcgattt gtttagacgc tttaggtaac gtttattttc atatcggcga
     4501 taacgcgaaa gcgctcgaat attatctcga atacatgaaa ttgaaagaag aactgaaaga
     4561 cctggacaat atttctgttg cttattacaa tattgccggc gtgtatgtgg aagaccagga
     4621 ttacaaacac gccttgtttt atcttttcaa agcaaaagac gttgatgaaa aggcgaagga
     4681 cagttctgcc ttgttgtatg ataattattc gctcgct
//
LOCUS       DASQJI010000119         2800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_623394,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000119 DASQJI010000000
VERSION     DASQJI010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623394"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1606
                     /locus_tag="VEV83_03605"
     CDS             134..1606
                     /locus_tag="VEV83_03605"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK44227.1"
                     /translation="MMEIKSEVVLLFFLVHFCSSVAQEARLTPAIKKQINTYIQAEMK
                     AEQIPGLTYAVVSNEKIIDSGAYGLANVELNAPVSTHSLFSIGSIGKTFTATAIMLLQ
                     KDGKLSIDDPINKYLDSIPDSWKEIRIRNLLSHTSGIKDYAHDFPGYPFIEKDRKQEI
                     TEAQFIRMATNLPLNFQPGDRWAYSNSNFVLLGFIIHKLSGKPLAEFMKERIFDPLNM
                     KETRYTSVTEIIPNRAHGYLLDEDDNNKLINGIYVSNFFSTMGDMGIITTATDLAKWS
                     IALDEGKILDKQTLQQMWTPSRLNNGLEAMGLLGINYGLGWAISDHRGTLEVGHGGSF
                     INGYTATLSRFPEKGLNVVVLTNLNPTNVDWIGYSIAGFFIKGLQGIDQIKTQQNADT
                     SFNENMRIFLKSLGTGNYDRSFVTDNFINRINPITKVIFSSANFNFSFTASDKMPEHF
                     ERYGVAVEKINYYQVSFRNETHYLAVYLTADNKIIDVRGY"
     gene            1641..2771
                     /locus_tag="VEV83_03610"
     CDS             1641..2771
                     /locus_tag="VEV83_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HYK44228.1"
                     /translation="MQRRSFVKNTAIMAASVAAGSSFSFKPGKTNPLPQWRGFNLLDF
                     FSPDPANNRHQTEEEHFKWMRDWGFDFVRIPIAYPCYLNIDRTKNISPNDVYKINEVA
                     VDAIDNLVQLAHKHDLHTSINLHRAPGYCVNAGFYEPFNLWKDDAAQQAFYFHWNMWA
                     KRYKNVSNKYVSFDLVNEPAMRDDMNDQHSKSGPVPGDIYRKVAKGARDAIRKETPDR
                     LVIADGNRTGSVVTPELIDLDIAQSCRAYYPGQISHYKAPWANKDTTNLPEPKWPGQV
                     GDKYMSRQMLEDFYKPWIDVANQGVGVHCGEGGCWKRTPHDVFIAWFTDVTDILFSNK
                     IGLALWNFIGDFGILDSGRTDVAYEDWHGHKLDKKLLDLIRK"
BASE COUNT          863 a          578 c          621 g          738 t
ORIGIN      
        1 agtcaaagaa cgcccgctgc tgtcggtaag cggcgagaaa taaggattaa aggaattacc
       61 gtccgctaat taatcaggca ggcgacgttc acctcaactg attccttaac tttattacaa
      121 ctaaattcag gtgatgatgg agattaaatc tgaagttgtc cttttatttt ttctcgttca
      181 tttctgttcc tctgtcgccc aggaagcgag gctaactccg gcgataaaaa aacaaatcaa
      241 tacttacata caagccgaaa tgaaggctga gcaaattccc ggccttacat acgcagttgt
      301 aagcaatgaa aaaataatcg atagcggcgc ctacggcctt gccaatgtag aattaaacgc
      361 accggtctca actcattctt tgttttcgat tggctcaata ggaaaaactt ttacggcgac
      421 tgctatcatg ttattgcaaa aagatggaaa actttctatt gacgatccga tcaataaata
      481 cctcgattcg atccctgaca gctggaaaga aatcagaata agaaatcttt tgagtcatac
      541 ttccggcatc aaagactacg cacatgactt tcctggttat cctttcattg aaaaagacag
      601 aaaacaggag atcacagaag cgcaattcat ccgcatggca actaatttgc cgctcaattt
      661 tcagccgggc gaccgatggg cttatagtaa ttcaaacttt gtattgttag gattcatcat
      721 ccataaacta tcaggcaagc cattggctga gtttatgaaa gaaagaatat tcgatccgtt
      781 aaacatgaaa gaaaccagat acacaagtgt aactgagatc attcccaacc gtgcgcatgg
      841 atatttgctg gatgaagatg acaacaacaa attgatcaat ggaatttatg taagcaactt
      901 tttctcaacc atgggtgaca tgggcataat caccactgca accgacctgg caaaatggag
      961 cattgcactg gatgaaggta aaattttaga taagcagact ttgcagcaaa tgtggactcc
     1021 atctagattg aataatggtc ttgaagcaat gggacttctt ggaataaact atggtctcgg
     1081 atgggcgatc agcgaccacc gcggtacttt agaagttggg cacggcggat ctttcataaa
     1141 tgggtataca gccaccctct cgagatttcc cgaaaaaggg cttaatgtgg ttgttctcac
     1201 aaatctcaac cccacaaatg tagactggat cgggtatagc attgccggtt ttttcattaa
     1261 gggcttacaa ggtatcgatc agattaaaac acaacaaaat gctgatacaa gcttcaatga
     1321 aaatatgcgg atctttctga agagcctggg aaccggcaac tacgacaggt ccttcgtcac
     1381 agataatttc attaatagga tcaatcccat tactaaagtg attttttctt ccgccaactt
     1441 caactttagc tttactgcat cagacaaaat gccggagcat ttcgagcgct atggagtggc
     1501 agttgaaaaa ataaactact accaggtaag tttcagaaat gaaactcatt acctggctgt
     1561 gtatctaacc gcagataata aaataattga tgtgagaggc tattaacccg cttctttatc
     1621 actttgaaaa aaaaattctt atgcaacgaa ggagctttgt aaaaaacaca gctatcatgg
     1681 ccgcttcagt tgcggccggc tcatcgtttt ctttcaaacc aggtaaaaca aatcccttac
     1741 cacaatggcg cgggtttaat ctgctcgatt ttttctctcc tgatccggca aacaatcggc
     1801 accagacaga agaagaacat ttcaaatgga tgcgcgactg gggttttgac tttgtgcgta
     1861 ttcccattgc gtatccctgc tatttgaata ttgatcgaac aaaaaatatc agccctaacg
     1921 atgtttataa aataaacgaa gtggcagttg atgctatcga caaccttgtg caactggcgc
     1981 ataagcatga tctgcatacg agcataaatc tgcatcgtgc tccgggttat tgcgtgaatg
     2041 caggctttta tgaaccattc aatttatgga aggatgatgc tgcacaacag gcgttttatt
     2101 ttcattggaa catgtgggca aagcgctata agaatgtttc caacaaatat gtaagctttg
     2161 acctcgtgaa cgaaccggcg atgcgcgatg acatgaacga tcaacattct aaaagtgggc
     2221 cggtaccggg cgatatttac cgtaaagtgg caaagggagc cagagatgct attaggaaag
     2281 aaacacccga caggttggtg atcgcagacg gaaatagaac gggaagcgtt gtcaccccgg
     2341 aactaattga tcttgacatt gcacaaagtt gcagggctta ttacccggga cagatctcac
     2401 attataaagc gccctgggcg aacaaagaca ctacaaacct gcctgagccg aaatggcccg
     2461 gacaggtggg cgataaatat atgagcaggc agatgcttga agatttttat aaaccgtgga
     2521 tcgatgttgc gaaccagggc gtaggcgtac actgcggcga gggcggatgt tggaagcgca
     2581 cgccgcatga tgtgttcatc gcgtggttca cagatgttac cgacatttta ttttcaaata
     2641 agatcggcct cgcattgtgg aattttattg gtgatttcgg aattcttgat tcaggcagaa
     2701 ctgatgttgc ttacgaagat tggcatggac ataaactgga taagaagttg ctggatctca
     2761 ttcgtaagta agtagttgct gtaaaccgga ggtttatgag
//
LOCUS       DASQJI010000120         8310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2620372,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000120 DASQJI010000000
VERSION     DASQJI010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8310
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2620372"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2115)
                     /locus_tag="VEV83_03615"
     CDS             complement(<1..2115)
                     /locus_tag="VEV83_03615"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK44229.1"
                     /translation="MLSEFYPAQAQQVTCNRVSSPEGSYYGLILDLTQDREGYMWFAL
                     GGGGLRRYNGYHFITYLHDPANPASLAANTLRSVCADHNGIIWVGTEDSGLDRFDPEG
                     GIFTHFRHDTHSPESLSDDRITTIIEDHSGTIWIGTKNGLNRLDEKTRTFTHYYFQRN
                     DSTTLGNNFIQVLYEDHRNTLWVGNRSSNDDQQGKGGLNRFDQRTGKFKRYQHDPKNP
                     HSLIDNRVCSIFEDSKGNFWVSTAGDGLHRMDREKGTFEVLRYDPSDASKLSAPPRIK
                     GVDEDLHLFFICEDGTGVIWIFMSGGWITRYDPETKKVTHYNSINDDVQAMQSVSGGF
                     KSHEGVLWITTWSGAIFTLDPFRNDIHHFATGSIVHAIHEDLSGTLWIGTFYEGIIRI
                     DRGTGRIKRYLNKHDPGKIWDSWVTAFHEGKDDTLWIGHGNGLYLFDTKQERFKHYKN
                     DPQNENSLSKGIVAAIIEDKPGSLWLATGGGLDLLDIKTGVFRHFRNNSTDGDSLSNN
                     GFTSLLKDHSGKLWLGTGNGRLHRFDPRSGKFTHFACGTDIGNIVEDHENIIWVGTST
                     GLYRSNSTLDSFARFVDPGTGLTASTIIAGILEDDQRNLWVSSSAGIFRFNEMRTEIR
                     VYNSNQGVHSSDLAYYLMRGEKCRHGELFFGDRTGYYAFFPGQFKNNTIPPQVVINEF
                     RLADRLVKPGNGGPLVLPIARTK"
     gene            2384..3007
                     /locus_tag="VEV83_03620"
     CDS             2384..3007
                     /locus_tag="VEV83_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44230.1"
                     /translation="MKTLSFFLGIAMTASQVIHLNVNATTAKHSSGSEVPQELLTDDS
                     TYWSITTVSTMGYVNTTPGAYYNTYKSGGGMIVKFKFKEDGTYQFMLYVQANTYNIEN
                     EAWTQIDGTVEFSKDALGQPVFITHANKGTYRMNRNGVVSSRPVPAEELAGKFSNTYL
                     WQKTKLQGDANNVYLLVLDLDEHPGVDLKHPENINPEWVSKFHIPAQ"
     gene            complement(3267..4373)
                     /locus_tag="VEV83_03625"
     CDS             complement(3267..4373)
                     /locus_tag="VEV83_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK44231.1"
                     /translation="MHSRRHFLKNISAAALAVPFSTELISAAACNSEDTPVLRVAIMG
                     LGSYGTRVADAMHDCKAAKLVGVISGHPEKITAWQSKYGIPAKNCYNYENFDNIKNNP
                     DIDAVYVITPNGLHHDEVIRVAQAGKHAICEKPMAINAKQGQEMVDACKKANVKLLVG
                     YRMHFEPKTLEVIRMRMNGEFGKILFFQGLSGFTIGDPTQWRLNKELSGGGSMMDIGI
                     YSINGSRYMIGEDPVWVTAQETKNDPVKFKDGVDETIQFQLGFPGGAVASCLSTYSMN
                     NLDRFFVNGTQGFAEMMPSTGYGPIMGKTHKGELTQPIVTHQTVQMDEMSAIIFQGKK
                     PVVPVDGEEGVKDLKIIDAIYEACKTGKKVELKL"
     gene            4493..5686
                     /locus_tag="VEV83_03630"
     CDS             4493..5686
                     /locus_tag="VEV83_03630"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYK44232.1"
                     /translation="MRKILFLLLLLVCVITFSCNQKEKSPGTAASAVAKDEWVKPEEK
                     DSILLLTDRPPNLETPLKYFLKDYTPNKVFFVRWHLSGLPAKVDVDTFRLRVAGNVTH
                     ELALSMQDLKTKFTPYTIAAVCQCAGNSRSFFDPRVAGGQWKNGAMGNAKWTGVKLKD
                     ILAMAEAKNGSKEVSFNGLDVPPMKETPDFVKSLQYDHATDGEVMIAYEMNGMPLPLL
                     NGFPLKLVVPGWYATYWVGMLSDINVLADTMKGFWMQKAYLVPKNAANGNERPDSLGT
                     NMEPINKMDVRSLFVSPEPGNIIPLRKATDIQGVAFDGGDGISKVEVSTDSGKTWLQA
                     TLSEDLGKYSWRHWHYNFTPAAKQIYYLQVKATNKKGETQPVHQWNRSGYMRNEIETL
                     MIKAE"
     gene            5726..6043
                     /locus_tag="VEV83_03635"
     CDS             5726..6043
                     /locus_tag="VEV83_03635"
                     /inference="COORDINATES: protein motif:HMM:NF021165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK44233.1"
                     /translation="MFYVISVMIVAIACNNNGIQGAPGGAETTDLNAIITELPNAPGY
                     DVFKTNCTSCHSARYVQMQPAFPEKTWTAIVTKMQKNFGAPVSDSSAKEIVKYLVAIK
                     GKT"
     gene            6186..7112
                     /locus_tag="VEV83_03640"
     CDS             6186..7112
                     /locus_tag="VEV83_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HYK44234.1"
                     /translation="MIQKLPLVFLLLISIGYASAQQVTPPAEQIKALTPDWQGERFPD
                     GRPRVSDKILDRLKDVALEEAWGILRNKGYQNQYEGEWMVLNPDSVMTGRVVTAQYMP
                     LRPDVDKLIRDKGKSEGRIGNTNSWPIDVLKDGDIYVADSYGKIVDGTLIGDNLGNSI
                     YAHSKRGVIFYGSVRDIEGLQEIKGFNAWVKGYDPSYIQQMMLTGINVPIRVGRATVL
                     PGDVVLAKKGGVVFIPAQFAEEVVMTAEFIQLRDAFGHQRLREGKYTPGQIDTEWTDE
                     IKKDFLNWINENPSQLKMTKEELDNFLKDRTW"
     gene            7173..>8310
                     /locus_tag="VEV83_03645"
     CDS             7173..>8310
                     /locus_tag="VEV83_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HYK44235.1"
                     /translation="MTPSEKFLSKMGLHETSVDSSGKISNQENNRRDFLKKTTLGGLA
                     LGGFLFAPLEETLAHCTSRVNRNSAPSDLKITDMRYATVMNTTGRCTIIRLDTNQGIS
                     GYGEVRDGADWRYALFLKSRIMGMNPCSVEQIFKRIKQFGFHGRQGGGVCAVEMALWD
                     LTGKAYNTPCYQLLGGKYRDTIRLYADTPEEDDPDKFVAKLKDRLQGKGFTFLKMDLG
                     IELIKNIPGTIVNSNYMDVGRQWNMDPMTYGSTEHPFTAVQITDKGIEELAKYVAKVR
                     DVIGFEVPLASDHYGHFDMNNAIRLGRGLEHYRLAWLEDLIPWHFMNELKEITSSIET
                     PTLTGEDIYLKEDFIKLVDMHAVDMIHPDLATSGGLLETKKIGDY"
BASE COUNT         2394 a         1853 c         1869 g         2194 t
ORIGIN      
        1 ttttgttcgc gctatcggta agaccaaagg gccgccgttg ccaggcttta caagccgatc
       61 tgccagtcta aactcgttga tcacaacttg tggcggaatt gtattgtttt taaactgacc
      121 cggaaaaaaa gcatagtatc cggtcctgtc accaaagaat aattccccgt gtctacactt
      181 ttccccgcgc ataagataat atgcaagatc cgacgagtgc acgccctggt tgctattgta
      241 aacccggatt tcagttcgca tctcattaaa ccgaaaaatg cccgccgatg agctgaccca
      301 aagatttctt tgatcgtcct cgagaattcc tgctatgatt gttgatgccg tcaatccggt
      361 tccaggatct acaaatcgtg cgaaagagtc aagcgtcgaa ttacttctat acagcccggt
      421 tgatgttccg acccagataa tgttttcatg gtcttctact atattgccta tgtctgtgcc
      481 gcaagcgaaa tgggtaaact ttccagagcg tggatcaaac cggtgcaacc tcccgttgcc
      541 agtacccagc cacaactttc ctgaatgatc cttaagcagg gaggtaaatc cgttattgga
      601 caggctgtca ccatccgtcg aattattacg gaaatgcctg aataccccgg tcttaatatc
      661 gagcaggtct aatcctccac cagttgcaag ccataacgac cctggcttat cttcgataat
      721 agctgcaaca atgccctttg acaaactgtt ttcattttgg gggtcatttt tataatgctt
      781 aaatctttcc tgctttgtat caaaaagata caggccattt ccgtgcccga tccaaagcgt
      841 atcgtctttg ccttcgtgga aagcggttac ccaggagtcc caaattttac caggatcatg
      901 tttgtttaaa tatcttttta ttcttcctgt acctcggtca atccggataa tcccttcgta
      961 aaaagtccct atccataagg tgcccgacaa atcctcatga atagcgtgga ctatgctgcc
     1021 tgtagcaaaa tggtggatat cgttacgaaa aggatctagc gtgaaaatag cgcccgacca
     1081 cgttgtgatc caaagaacgc cctcatgcga cttaaagccg ccggaaactg attgcatagc
     1141 ctggacgtcg tcattgatcg agttgtagtg cgttaccttt tttgtttccg gatcatacct
     1201 ggtgatccat cctcctgaca taaagatcca aataacccct gtgccgtctt cacagatgaa
     1261 aaaaagatga aggtcctcgt caactccctt tattctgggt ggtgcactta actttgaagc
     1321 atctgagggg tcatagcgca gcacttcaaa tgttcctttc tcccggtcca tccgatgcag
     1381 tccatcgccc gcagtgctta cccaaaaatt tcctttactg tcttcaaaga tcgaacacac
     1441 gcgattgtca ataaggctat ggggattttt gggatcatgc tggtaccttt taaatttgcc
     1501 tgtccgttga tcaaaacgat ttaaccctcc tttcccctgt tgatcatcat tcgagctgcg
     1561 gttgccaacc cacaacgtat tccggtggtc ttcatatagt acctggataa aattatttcc
     1621 gagcgttgta gaatcatttc gctgaaaata ataatgagtg aaggttcgcg tcttttcatc
     1681 caatcggttc aaaccattct tcgtacctat ccaaatcgtg ccggagtggt cttcgataat
     1741 tgtggtaatt ctgtcgtcgc tcaggctttc cgggctgtgc gtgtcatgcc gaaaatgagt
     1801 gaagatgcct ccttccggat caaaccggtc aagacccgag tcctctgtgc ctacccaaat
     1861 tataccattg tggtctgcac aaaccgaacg aagggtatta gccgctaatg aagccggatt
     1921 agccggatca tgcaggtaag taatgaaatg ataaccgttg tagcggcgca acccaccgcc
     1981 cccaagggca aaccacatgt atccctctcg atcctgcgtg aggtcaagga taagtccata
     2041 ataagaacct tccggcgatg aaacgcgatt gcaggtaacc tgctgcgctt gtgcaggata
     2101 aaattcagat aacaagacta aaaaaataat tgcgaataaa gggcagcaaa ttttcatatg
     2161 gctttcgcgt atcctaaata taatcaactt ttccttttaa atcacaggca gcaatgactc
     2221 aatgcgtatt tgtagaatga gcatccgaca atttttttcc gatgtcttac ttcaattcat
     2281 cccgcgcaaa tctcaattca tttcaaaacc acttttcaag cctgtaacgg ccacacaaat
     2341 ttgctctgca aaaggatcac aaatcatttc aaaatcttaa tgtatgaaaa cactatcttt
     2401 ttttctgggc attgcaatga ccgcttcaca ggtcatccac ctcaacgtaa acgcgacaac
     2461 tgcaaaacac agttcaggtt cagaagtccc acaagagctt ttgactgatg attcaacgta
     2521 ttggagcatt acaaccgtat caacgatggg ttatgtaaat acaactcccg gcgcttacta
     2581 caatacatac aagagcggtg gcggcatgat cgttaaattc aaattcaaag aagacggcac
     2641 ataccagttc atgttgtacg tacaggcaaa tacatataac atcgagaacg aagcatggac
     2701 gcaaattgat ggaacagtgg aattttccaa agatgcatta ggacaaccag tctttattac
     2761 acacgccaac aaaggaacat accggatgaa cagaaacgga gttgtgtctt cacggccggt
     2821 gcctgcagag gaacttgcgg gcaaattttc caatacttat ttgtggcaaa aaacaaaatt
     2881 gcagggcgac gcgaacaatg tgtatttgct ggtgcttgat cttgatgagc atcctggtgt
     2941 tgatctaaag caccctgaaa atattaaccc ggagtgggtg tctaagtttc atattcctgc
     3001 acagtaaatt ttgcaagaaa tcgtttgcaa ggtccggaaa tttggttttc aacaaattct
     3061 agaatgcggc taaagccggt tcaaaaataa agttcttcat cagttggctg aagtcaacta
     3121 caataaataa aggtccccgg aaaaagaagt ctattgcagt cagctttagc tgactgctat
     3181 taagggaaga gctatgcgcg gcttcagccg cattattaaa tgcacctaca caggtcacaa
     3241 acaaattatc agcgcaaacg agcaaattat aatttcaact cgaccttctt gccggttttg
     3301 catgcctcgt agatggcatc gatgatcttg aggtctttca ccccttcttc accatcaacc
     3361 ggcacaacag gctttttgcc ctggaagatg atcgctgaca tttcatccat ttgtactgtt
     3421 tgatgtgtga caataggctg cgtcaattca cctttatgcg ttttgcccat gatcggtcca
     3481 tatcccgttg acggcatcat ctcggcgaag ccttgcgtac cgttaacaaa gaaccggtcc
     3541 aggttgttca tagagtaagt tgataagcat gacgcaaccg caccgcccgg aaaaccgagc
     3601 tggaactgga tggtctcatc aacgccatct ttaaatttta cggggtcgtt ctttgtttcc
     3661 tgtgcagtaa cccaaacagg atcttcacct atcatgtatc gtgaaccgtt gatggaataa
     3721 attccgatgt ccatcattga cccaccaccg gaaagctctt tgttcaaccg ccattgagtt
     3781 ggatcaccga tcgtaaaacc actcaatccc tggaagaata aaattttacc gaattcacca
     3841 ttcattcgca tgcgtatcac ttcaagcgtt tttggttcga aatgcatgcg gtagccaaca
     3901 agcaatttca cgttcgcttt tttgcaggcg tcaaccattt cttggccctg cttcgcgttt
     3961 atcgccatgg gtttctcaca tatggcatgt ttcccggcct gtgcaacacg gatcacctcg
     4021 tcatggtgca aaccatttgg tgtgatgaca tacaccgcat cgatatccgg gttgtttttt
     4081 atgttatcga aattttcgta gttgtaacag ttcttagccg gtataccata tttactttgc
     4141 catgccgtga tcttttccgg gtggccactg atcacgccaa ctaattttgc agccttgcaa
     4201 tcgtgcattg cgtccgctac acgcgttcca tagctgccaa gacccataat cgctacgcgt
     4261 aacaccggcg tatcctccga attgcatgct gctgcagaaa ttaattctgt agaaaaagga
     4321 acggcaagtg cggctgccga aatgttcttt aaaaaatgcc gacgggaatg cataagaatg
     4381 tttttgatga aagacgttca cgcaagttat cgcaaaaagt tttccttcac ttgccgaaac
     4441 gcaggttaac ttgaatatct ttatgcgaag gcttttcata caaattctcg gaatgagaaa
     4501 aattttattt cttcttcttc ttctagtatg cgtgattact ttttcatgta atcaaaaaga
     4561 aaagtctccg ggtactgcag cgagcgctgt tgctaaagac gaatgggtga aaccggaaga
     4621 aaaagattca attttgctac tgaccgaccg gccgccgaat ctcgaaacgc cgctaaaata
     4681 ttttttaaaa gattatacgc cgaataaagt attctttgtt cgttggcatc tgtccggttt
     4741 accggcgaag gtggacgttg acacgtttcg cctgagagta gccgggaatg ttacgcatga
     4801 acttgccctt tcgatgcagg atctgaaaac aaagtttact ccgtacacga tcgcagctgt
     4861 ttgtcaatgc gcaggcaatt caagaagttt tttcgatccg cgtgttgcag gcggacaatg
     4921 gaaaaatggc gcaatgggca acgctaaatg gaccggcgta aaattaaaag acatactcgc
     4981 gatggcagaa gctaagaacg gatcgaaaga ggttagcttt aacggcctcg atgttccgcc
     5041 tatgaaggaa acaccggatt ttgtaaagtc acttcaatat gatcatgcca ctgacggcga
     5101 agtgatgatc gcgtacgaga tgaatggaat gccgttgccc ttgctaaacg gctttccgtt
     5161 gaagcttgta gttcccggtt ggtatgcaac ttactgggtc ggcatgttga gcgatatcaa
     5221 tgttctcgca gatacgatga aaggtttctg gatgcagaaa gcatacctgg ttccaaagaa
     5281 cgccgctaac ggtaatgaac gtccggattc gcttgggaca aatatggagc cgatcaacaa
     5341 aatggatgtt cgctcattat tcgtgtcgcc ggagcccggc aatataattc cacttcgcaa
     5401 agctaccgac atacaaggag tagctttcga tggaggcgat gggatctcta aagtggaagt
     5461 ttccacagac agcggaaaga catggttgca agcaacactc agtgaggatc ttggtaaata
     5521 ttcatggcga cactggcatt acaactttac gccggccgca aaacaaattt attatttgca
     5581 ggtaaaagca acgaataaga aaggagaaac gcaacctgtt caccagtgga atcgcagtgg
     5641 ttatatgcgc aatgaaattg aaaccttaat gatcaaggca gagtaactta tgaaatattt
     5701 taggaggcat attagaccgc atttcttgtt ttacgttata agcgtaatga tcgttgcgat
     5761 cgcttgcaac aataatggaa tacaaggtgc tccgggcggg gccgaaacca cagatctgaa
     5821 tgcgatcata accgaattgc cgaacgcacc gggatatgat gtttttaaga cgaactgtac
     5881 aagctgccat tcagcgcgct atgtacaaat gcaaccggcg tttcccgaga aaacatggac
     5941 agcgattgta actaaaatgc aaaagaattt tggcgcacct gtttctgatt cttcagcgaa
     6001 agagatagtg aagtatctcg ttgccatcaa aggcaagaca tgagagtagt gaaatgaaat
     6061 ggccgccttt aagcattatc acaagaaaaa aaatctttgc caaagcgtcc tgttgatttc
     6121 tgcaattgaa ttttatcttt ataatatcca cttcaatagt ttgtcattac tccaaataac
     6181 caacaatgat acaaaaactt ccgctcgtct ttcttctttt gatcagcatc ggttatgcat
     6241 ctgcgcagca ggtaacgcca ccggctgaac aaataaaagc gctgactcct gattggcagg
     6301 gagaacgttt tcccgacggg cgaccaagag tttccgataa aattctggac aggttaaaag
     6361 acgttgcgct tgaagaagcg tggggaatac taagaaataa agggtatcaa aatcagtatg
     6421 agggagagtg gatggtattg aatcccgaca gcgtaatgac tggtcgcgtt gtaactgcgc
     6481 aatacatgcc gcttcggccg gatgtagata aattaataag agacaaagga aaatcggagg
     6541 gcagaattgg taatacaaat tcgtggccga tagatgtatt gaaagatggt gacatttacg
     6601 tcgccgatag ctatggaaag atcgttgatg gtacgctcat cggcgacaat ctcggaaatt
     6661 ctatttatgc tcattcaaaa cgcggcgtta ttttttacgg atcagtgcgt gacattgaag
     6721 ggctgcaaga aataaaaggg ttcaacgcgt gggtgaaagg ttacgatccg tcatacatac
     6781 aacaaatgat gctgacaggg atcaatgttc cgatccgtgt tggcagggcg actgtcttac
     6841 ccggagatgt tgtactcgca aaaaaaggcg gcgtcgtttt tattcccgca caatttgcag
     6901 aggaagttgt gatgactgcg gagttcatac aactgaggga cgcgttcggt catcagcgcc
     6961 tgcgcgaagg caagtacaca ccggggcaga tcgacacgga atggacagat gaaataaaaa
     7021 aagatttctt gaactggatt aacgagaatc cctcgcaatt aaaaatgacg aaggaggaat
     7081 tggataattt cttaaaggac agaacgtggt gaaaccactg cccgaaaggg agttaaagaa
     7141 cctcgattat aacttcaaaa atcattacaa cgatgacgcc gtctgaaaag tttttatcaa
     7201 agatgggttt gcatgaaacc tcggttgatt caagtggtaa aatttcaaat caggaaaaca
     7261 atagaagaga ttttttaaaa aagacaaccc ttggcgggct tgccctaggc ggatttcttt
     7321 ttgcaccgtt ggaagaaaca cttgctcatt gtacgtcgcg cgtgaacaga aattctgcgc
     7381 cctccgatct aaagataacc gatatgcgtt atgctactgt gatgaataca acagggcgct
     7441 gcacgatcat acggctcgac actaaccagg gcatctctgg atatggtgaa gtacgtgatg
     7501 gtgcagactg gcgttatgca ctgtttttga aaagcaggat catgggaatg aatccatgca
     7561 gcgtagagca gatcttcaaa cgcataaagc aatttggatt tcatggcagg cagggaggcg
     7621 gcgtgtgtgc ggtagaaatg gctttatggg acctgacagg caaagcatat aatacaccgt
     7681 gctaccagtt gctcggcgga aaatatcgcg acaccattcg cctgtatgcc gacacgcccg
     7741 aagaagatga tcccgacaaa tttgtcgcga aactaaaaga ccggcttcaa ggaaaaggct
     7801 tcacgttttt aaaaatggac ctcggaatag aactgataaa aaatattccc ggtaccatcg
     7861 tgaactcaaa ctacatggat gtcggcaggc agtggaatat ggacccaatg acgtatggtt
     7921 caacggaaca tccattcacc gctgtgcaaa taacagataa aggaattgaa gaactggcga
     7981 agtatgtggc gaaagtgcgc gatgtgatcg gttttgaagt tccgctggcc tcggatcatt
     8041 acgggcattt tgatatgaac aatgcgatca ggttgggaag agggttggaa cattatcgtc
     8101 tcgcctggct ggaagatctt attccctggc acttcatgaa tgaattaaaa gagataacaa
     8161 gttcgatcga aacgcccacg cttaccggcg aagatattta cctgaaggag gactttatta
     8221 agctggttga tatgcacgca gttgatatga ttcatcctga tctggctact tcaggcggat
     8281 tgctggaaac aaaaaagatc ggcgactacg
//
LOCUS       DASQJI010000121         1595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1545080,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000121 DASQJI010000000
VERSION     DASQJI010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1545080"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VEV83_03650"
     CDS             complement(<1..233)
                     /locus_tag="VEV83_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44236.1"
                     /translation="MKFYLFVLTVPLLFLSGKKTNFPTETTGDPMHLNVILILADDVG
                     YEVPTVDGGQSYQTPTLDKMAAEGRRFTQCHSSP"
     gene            762..1046
                     /locus_tag="VEV83_03655"
     CDS             762..1046
                     /locus_tag="VEV83_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44237.1"
                     /translation="MTLIGFLVLLLIAAICGAIGQSLAGYDLGGCLVSIIVGFIGAYI
                     GMWIAGKFGLPPIFTISIQGQPFPVVWSVIGSAVFTLIVALLRRAFIGPR"
     gene            1138..>1595
                     /locus_tag="VEV83_03660"
     CDS             1138..>1595
                     /locus_tag="VEV83_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44238.1"
                     /translation="MPAPGTKLTESSEVIVKESALTNGIMGGLYAVLVVVTLVNAPKG
                     SSDQMNTYYYSLILVLVPALLFIFRGFLHKTVITINASGIYQYGMLITAWKDLVNARI
                     TEEDIADSISDNFVLLIDYYSPERGGYFERKIPLTSTQTKSEEEIMEAIN"
BASE COUNT          440 a          360 c          350 g          445 t
ORIGIN      
        1 ggagaactgt ggcattgcgt aaatcttcgg ccttccgcag ccatcttatc caaagttggt
       61 gtttgatacg attggccgcc gtcaacggtt ggcacctcgt aacccacatc gtctgccaat
      121 attaaaataa cattcagatg catgggatca ccagtcgttt cagtggggaa gttcgttttc
      181 tttccggaca aaaaaagcag gggaactgtt agaacgaata aatagaattt catttttgat
      241 tagctcgtaa cattttgcaa agcatctata aaaataccga aaacttgtct tcacgaaaat
      301 tgctttggct attaaagaaa ggcgaaaatt atttatggac cataaactta gttttcattt
      361 tatatacgaa aagattttgg ggctgtcagc tgtattgtca taatcagccg cagttcgggc
      421 tgctgcgtgc tgacggtgct tcactcattt cgcactgcca ctccgcatcc cgcagcctct
      481 catcttttca acacggatca gcaacccatt tttttagacg gtgcatgtaa agccggatcc
      541 ttgggttcac ataaacgatc cgggaagctt tcgggctcat gcaacttgca ttggtgaaca
      601 tcggggacgg ttgcaaaaaa aattgcatca ccgcatagat gatcaatcga catgcgaaag
      661 cactgatcct gtaatcgcca gctaaaaatt cctatcgaaa cattgatcga atattgctca
      721 tcgagtgttc agaaaacttt atttttaata aaatttaagc catgacacta attggatttt
      781 tagtcctcct attgatcgca gctatctgcg gcgcgatcgg gcaatcattg gcaggttatg
      841 atctgggcgg atgcctggta tccataattg ttggttttat tggcgcatac attggtatgt
      901 ggatagccgg caagtttggc ttgcctccaa tctttacaat atctatacaa ggacaacctt
      961 ttcctgtagt gtggtcggtg atcggctccg ccgtatttac gcttattgtg gcgttgctgc
     1021 gacgagcatt tatcggccca agatagcgga gtacagggcc acgactcacg gcagaaattt
     1081 cgtctaacac ataacacatg ttcgcggttt gcttatctta gcaagagctg attgcccatg
     1141 cctgcacccg gtaccaaact cactgaatcg tctgaagtta tcgttaagga atctgcatta
     1201 accaacggca tcatgggtgg cctttacgcg gtcctggtcg tagtcacact tgtaaacgca
     1261 cctaagggaa gcagcgacca aatgaacacc tactactatt cccttatcct ggttttggta
     1321 cccgcactgc tttttatatt cagaggattt ttgcataaga cggtaataac aatcaacgcc
     1381 tcaggcatct accagtatgg aatgctcatt accgcgtgga aggatcttgt gaacgccagg
     1441 atcacggagg aagacatagc agacagtatt tccgacaact ttgttttgct catcgactac
     1501 tacagcccgg aaagaggagg ctatttcgaa cggaaaattc ctttaacgtc aacacaaaca
     1561 aaatcggaag aagaaatcat ggaggcgata aactt
//
LOCUS       DASQJI010000122         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1084245,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000122 DASQJI010000000
VERSION     DASQJI010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084245"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VEV83_03665"
     CDS             <1..182
                     /locus_tag="VEV83_03665"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK44239.1"
                     /translation="MQYGGTVYILTNVRHEVLYMGVTSDLFARIPEHIMKVFKIHLPQ
                     NIIATSLFTMKHSAE"
     gene            complement(569..>2056)
                     /locus_tag="VEV83_03670"
     CDS             complement(569..>2056)
                     /locus_tag="VEV83_03670"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44240.1"
                     /translation="DGVNIASRLQAAAEAGAIYISDVVFHNVSNKKGINTRFVKEDHL
                     KNVKQPVKIYEVEYKKNKATNGAIKTIPPKSIAVLPFVNMSNDPEQEYFCDGISEEII
                     NALAQLNNLRVIARTSAFSFKDKNVDVREIGKTLNVSTLLEGSVRKSGNKLRITTQLI
                     NVADGSHLWANRYDRDMQDIFSIQEDIAQNVATSLRGVLTNEEKEAIRRPETTIVQAY
                     EYFLKGRQLFHQLELRESIKYFRKALELDPEYALAYAGLADAHAWLYEWEGAKNTDLV
                     AATTNSKKALELAPNLSESHSSHGFALSLCSKYDEAAQEFTQAIRLNSNSYDAFYYYA
                     RLCFARGHMEQSADLFLKASEVRREDFQSILLLGQVYRVLNSDKAEDAFIEGVKRLRK
                     YVELNPDDIRALSFGAGALLEIGNRDEAYQWMNRALELDPRNAGVLINGSCLFAKAGD
                     KERALDVLERAVDLGYGKKDWMENDPDYDNIRHESRFKELMERIR"
BASE COUNT          518 a          477 c          452 g          609 t
ORIGIN      
        1 tcatgcaata tggaggaaca gtctacatct taacaaatgt gcgtcatgaa gttttgtaca
       61 tgggtgtaac ttctgacctt tttgcacgaa ttccagagca tattatgaag gttttcaaaa
      121 ttcatttacc gcaaaatata attgcaacaa gcttgtttac tatgaaacat tcggcagaat
      181 agaagatgcc attgcaggag aaaaacagtt gaagaagtgg aatcgatcct ggaagaataa
      241 attgatttca gatatgaagc ccgactggaa ggatttgttc attggccttt aaaattattt
      301 acagcagatg cccggtcggg ccgggcatga cggcgacgtg gttgccatgt gttcggcaag
      361 aggatttccg caagtcgatt ctaatagcac aacacgttcg attcattact cattgttttg
      421 gatttcgcat tttggaatga agatggggca taattttctc tcctcgtttt tgatttattt
      481 gagatttgag atttgggatt taggatttag gatttaggat atgttccggt cacgctgcag
      541 ggagatgcaa atgtttacag gccgcttatt acctaatcct ctccatcaat tccttaaagc
      601 gcgattcgtg cctgatatta tcgtagtccg gatcgttttc catccagtct ttttttccat
      661 aacccaaatc aacggctctt tccagcacat caagcgctcg ctctttgtca cccgcttttg
      721 caaaaagaca ggagccgttg atcaacacac ctgcattgcg aggatcgagt tcaagcgcac
      781 ggttcatcca ctgataggcc tcatccctgt tgcctatttc gagcagtgcg cccgccccaa
      841 acgaaagtgc gcggatatcg tccggattta attccacata cttcctcaat cgttttacgc
      901 cttcgatgaa agcatcctct gctttatcgc tgttaaggac acggtaaacc tgcccgagca
      961 gcaagatgct ttgaaaatct tcccttcgaa cttcagacgc tttaaggaac aggtcggccg
     1021 attgctccat atggccgcgc gcaaagcaga gcctggcgta ataataaaat gcgtcgtacg
     1081 aatttgaatt cagacggatc gcttgtgtga attcctgcgc tgcctcatca tatttgctgc
     1141 acagtgacaa cgcgaagcca tgtgaagagt ggctttcaga taagttcgga gcaagctcaa
     1201 gcgctttttt actatttgtt gtggcggcta cgaggtcagt gttttttgca ccctcccatt
     1261 cgtatagcca tgcgtgagca tccgcaaggc ccgcatacgc aagtgcatat tcaggatcca
     1321 gttccaaagc ctttcgaaaa tattttattg attcgcgaag ttccagttgg tgaaacaatt
     1381 gtctgccctt cagaaagtat tcataggcct gcacaatcgt ggtttcaggg cgccggatag
     1441 cttccttttc ttcattggtc aaaaccccgc gcaatgatgt tgccacattt tgcgcaatat
     1501 cttcctggat ggaaaaaata tcctgcatgt cacgatcata gcgatttgcc cacaaatgag
     1561 aaccgtcagc aacatttatg agctgcgtgg tgatgcgtaa tttgtttccc gatttacgga
     1621 cacttccttc gagcaacgtt gaaacattaa gcgtcttccc aatttcacgc acgtccacat
     1681 ttttatcctt gaaagaaaac gcagacgtgc gcgctataac gcggaggtta tttagttgtg
     1741 cgagtgcatt gatgatctct tccgatatgc catcgcagaa atattcctgc tcgggatcgt
     1801 tgctcatgtt tacaaaaggc aacaccgcga tgctcttggg cggaatcgtt ttgatagcac
     1861 cgtttgtcgc cttatttttt ttgtactcga cctcataaat tttgaccggc tgttttacgt
     1921 ttttcaaatg atcttctttt acgaagcgtg tgttgatccc tttcttattc gatacgttat
     1981 gaaaaacaac atcggagata tagatagctc ccgcctccgc cgccgcctgc aggcgcgaag
     2041 cgatgtttac gccgtc
//
LOCUS       DASQJI010000123         3549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_470510,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000123 DASQJI010000000
VERSION     DASQJI010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470510"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1176)
                     /locus_tag="VEV83_03675"
     CDS             complement(<1..1176)
                     /locus_tag="VEV83_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44241.1"
                     /translation="MIRNHFKIAWRNLMKYKFISFINLFGLTVGLTCCLLILTYILNE
                     LSYDKYNKNADNIYRVTRTFYNGNGEATLSLSTVSPPFGYYLPTDFPEIQKMTRLLNN
                     GTTPLRYKDKLINEKDVYFADENLFDVFSVNVLKGNPKTALADPFTVMLTEETAKKYF
                     GNEDPINKVLRANNQFDVKVTGVYKAFPSNAHLHPNMLVSFNTLKDSTVYGEEGLRTN
                     WGNNSFFTYLLLPDHYNIENMKARFPAFLDKHMEGQYGPNEPSKFTTLDLQKLTDIHL
                     YSHTDYEAEPNGDVKRVYVFAAIALFILLIACINYMNLSTARSALRAREIGIRKVVGA
                     RKRELVIQFLTESVLITWSAILIGFGLLYFALPWLNKVSGQSLSVSILMKWQVLVPLF
                     "
     gene            complement(1279..>3549)
                     /locus_tag="VEV83_03680"
     CDS             complement(1279..>3549)
                     /locus_tag="VEV83_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44242.1"
                     /translation="ACAALIFLWVENELTWNHYFSNRANLYNVKDQQTYDGTTFTFDA
                     TPGPMAQSMKAEIPGIKNTARSTWGNQLLFSVGDKNIYDQGNYVDAPFLTMFQLQFVR
                     GSAATAFDQLYSLVVNETMAKKFFGTIDVLGKSLKVNNTQDYIITGVIRDLPKNVSFK
                     FDWLAPFKIYENDNSWLQHWGSNGVITYVETVPNANVAAINKKLHGYIQTKEPETIAR
                     MSIYPMDRWRLYNNFDTNGKEKEGRLKFVNLFSLIAWIILIIACINFMNLATARSEKR
                     AREVGVRKVLGAAKRKLIGQFIGEALFMSFLATLFAVIIIYLVLPAFNTLVEKQLTLD
                     IFNPLHFGALLLITILCGLIAGSYPAFYLSSFNPVFVLKGLKLKSGSAGFIRKGLVVL
                     QFTISVTLIISTIIIYQQLQHVKDRDLGYNREGLVYTNLTGNMKQNFGVIRNDLLRTG
                     LVQNATLSNDYVLQLGSNTGDFEWPGKDPNKQVLITVEGVSPEYISTMGMHLNAGRDF
                     YSDIKSDSNNLIINQALAKLLGKKNVIGSIITRDDGNEKYTIVGVIDDFVYNSMYAPA
                     APMIMFSDTSHVSFLTVRLKQNADTKTAVAQVEDIVKRNNPGYPVEFSFVDEQFDQLF
                     KTETLIGKLAGVFAVLAILISCLGLFGLSAYMAEKRTREIGIRKVLGASATGLAGLLS
                     KDFIKLVLLSCLFAFPLAGWYMHNWLQDYEYRIGLSWWIFIIAGLLATVIALATVSFQ
                     AIRAAVANPVKSLRTE"
BASE COUNT          989 a          799 c          743 g         1018 t
ORIGIN      
        1 gaacaatggc accaagacct gccatttcat taatatagat acggaaagag attgtcctga
       61 aactttatta agccatggca atgcgaaata taataaacca aaacctatga ggatcgctga
      121 ccatgttatt aacacagact cggtaaggaa ctgaatgacc aactccctct ttctcgcgcc
      181 aaccactttt cgaatgccga tctcccttgc gcgcaatgca gaacgggcgg tggaaagatt
      241 catgtaatta atgcacgcaa tcagcaaaat aaataatgcg atcgcagcga aaacatacac
      301 gcgtttgaca tcaccattcg gttcagcttc ataatcggta tgtgagtaca agtgtatatc
      361 tgtgagtttt tgaagatcga gtgtcgtaaa ctttgaaggt tcattcggac catactgtcc
      421 ttccatgtgt ttatcaagga aagcaggaaa ccgcgctttc atgttttcaa tattgtaatg
      481 atcgggcagc aggaggtacg taaaaaatga gttgttaccc cagtttgtgc gcagcccttc
      541 ttctccatac acagtggaat cttttagtgt attaaaagag acaagcatgt tcggatgcag
      601 gtgcgcattt gagggaaatg ctttgtacac gcccgtcact ttcacatcaa actggttatt
      661 tgctcttaat actttattga tcgggtcttc gttaccgaaa tatttttttg ctgtttcttc
      721 cgttagcatt accgtaaaag gatcggccag tgcagtcttt gggttccctt ttaatacgtt
      781 aactgagaaa acgtcaaaaa gattttcatc cgcaaaataa acgtccttct cgttgatgag
      841 tttgtcctta taacgaagcg gagttgttcc gttattcaac aatctcgtca tcttttggat
      901 ctcaggaaaa tccgtcggca agtaatagcc aaacggcgga gaaactgtgc tgagcgaaag
      961 cgttgcctcg ccgttaccgt tataaaaagt gcgtgtgacc cggtaaatgt tatccgcgtt
     1021 cttgttgtac ttgtcataac ttaattcatt gagaatgtaa gtgaggatga gcaggcaaca
     1081 cgtgagacca actgtgagac caaaaagatt gatgaaggaa ataaatttat acttcatcaa
     1141 attgcgccat gcgattttaa agtgattgcg gatcattgat tttcgattta cgagttacga
     1201 tttacgattt tagattggcg attgcagatt gcagatttac atcgaacttc aaacctcaaa
     1261 ctgcaaactt caaacgcatt attccgttct caaactcttc acaggatttg ccactgctgc
     1321 cctgatcgcc tggaagctta cagtagccaa tgcgatcacc gtcgctaaca aaccggcgat
     1381 aataaatatc caccaactga gcccaatccg atattcgtaa tcctgcagcc agttgtgcat
     1441 ataccaaccg gcgagcggaa atgcgaaaag acaggagagc aaaacaagct taataaaatc
     1501 tttcgataac aaaccggcca acccggtagc tgatgcgcca agcactttgc gaataccgat
     1561 ctctcttgtt cgtttttctg ccatgtacgc cgacagcccg aacaatccaa ggcatgaaat
     1621 taaaatcgca agtacggcaa acacaccggc tagttttccg atgagcgttt ctgttttgaa
     1681 taactggtca aattgttcat ctacaaaact gaattcaacc gggtaacccg ggttgtttct
     1741 ttttactatg tcttccactt gtgcaacggc cgtttttgta tctgcgttct gtttcaggcg
     1801 aacggttaaa aagcttacgt gagaagtatc tgaaaacatg atcatcggtg cggcgggcgc
     1861 atacatggaa ttgtaaacga aatcatcgat cacacctact atcgtatatt tttcgttgcc
     1921 gtcgtcgcgc gtgatgatgc tgccaatcac attttttttc ccgagtaatt ttgcgagagc
     1981 ctggttaatg atgagattat tactgtctga tttaatatcg ctgtagaagt cccttcctgc
     2041 attaagatgc atgcccatcg ttgaaatata ctcggggctc acaccttcaa ccgtgatcag
     2101 cacctgttta ttgggatctt tgcccggcca ttcaaaatca ccggtgttgc tgcctaactg
     2161 caaaacataa tcattgctta aggtcgcatt ctggaccagc ccggttcgca ggagatcatt
     2221 cctgatcaca ccgaaatttt gcttcatgtt gcccgtgaga ttagtgtata caagtccttc
     2281 cctgttgtac ccgagatccc tgtctttcac gtgctgcaat tgctggtaaa taattatcgt
     2341 ggatatgata agcgttactg agatcgtaaa ctgcagaact accaggcctt ttctaataaa
     2401 cccggcactt cctgatttca gctttaatcc ttttaataca aatacaggat tgaatgacga
     2461 aaggtaaaag gccgggtaac tgcctgcgat caatccgcag agaatggtta ttagcagcaa
     2521 agcgccaaag tgcaagggat tgaaaatatc aagtgtgagc tgcttttcaa ccagcgtatt
     2581 gaatgcaggc aatacgaggt aaataatgat cacagcaaaa agagtcgcga gaaacgacat
     2641 gaacagggct tcaccaatga actgtccaat aagttttctc tttgcggcac ccaacacttt
     2701 tcgcacaccc acttcccttg cgcgtttctc cgaacgcgcc gtagcaagat tcatgaagtt
     2761 gatgcacgca attattaaaa tgatccaggc gatcaggctg aacagattca caaattttag
     2821 ccggccttct ttctcttttc catttgtgtc gaaattgttg tacagtctcc agcgatccat
     2881 tggatagatc gacattcttg cgatcgtttc cggctccttg gtttggatat acccatgcag
     2941 ttttttattg atcgcggcta cgttcgcatt tggcaccgtt tcaacataag tgatgacgcc
     3001 attgctaccc cagtgctgta gccagctatt gtcgttttcg taaatcttga acggggcgag
     3061 ccagtcgaat ttaaacgaaa cattttttgg caggtccctg atcacgccgg taatgatgta
     3121 atcctgtgtg ttatttacct tgagtgattt accgagaaca tcaatagtgc cgaaaaactt
     3181 tttcgccatc gtttcgttca ctacgagaga atacagttga tcaaaagcag ttgccgcact
     3241 acccctgaca aactgcagtt gaaacatggt aaggaatgga gcatctacat aattgccctg
     3301 gtcataaata tttttatctc ccacagaaaa aagcagttgg ttaccccatg tgcttcgtgc
     3361 tgtatttttt attcccggga tctcggcctt catcgattgg gccattggac cgggcgttgc
     3421 atcaaaagtg aaggtggtgc catcgtaagt ttgttgatcc tttacattat ataaattggc
     3481 gcggttgctg aaataatgat tccacgtcaa ctcattttcg acccacaaaa agatcaatgc
     3541 agcacacgc
//
LOCUS       DASQJI010000124         1798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_317296,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000124 DASQJI010000000
VERSION     DASQJI010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317296"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..639)
                     /locus_tag="VEV83_03685"
     CDS             complement(238..639)
                     /locus_tag="VEV83_03685"
                     /inference="COORDINATES: protein motif:HMM:NF022443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2809 domain-containing protein"
                     /protein_id="HYK44243.1"
                     /translation="MLLKRRLIYLLLLIFCIWLAFATRLHATWFPAFIAKYGGDTIWA
                     GQFLFFLRIIFIHTSLARLAFLNFSLGVLVETSQLYHAAWIDSIRSTVVGEALFGLGF
                     LWSDIICYAVGTLLAYFICLLIEKLLFPTPK"
     gene            complement(784..1278)
                     /locus_tag="VEV83_03690"
     CDS             complement(784..1278)
                     /locus_tag="VEV83_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK44244.1"
                     /translation="MKEQNSQPDVGKLIQQLVELLQNGHAHVTLNDAVKDIPFELLGK
                     KPGGLTYSIWQIAEHIRIAQWDILDFSRNKNYKEMKWPEDYWPQEDAPESEAAWNDCI
                     KQINEDQGSFIDLLHAHAGDLFKPISHGSGQTLLREALLIADHNSYHVGQIVVIRRLL
                     GNWN"
     gene            complement(1337..>1798)
                     /locus_tag="VEV83_03695"
     CDS             complement(1337..>1798)
                     /locus_tag="VEV83_03695"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYK44245.1"
                     /translation="ISYSCIAVVTLAIVLWYHFSMQSVMLWSASILQRGIAVGAISFG
                     GLVMLLFTRRFFFDLSGADIFRKKKLTQQLIRTDFYKYVRHPLYAATLLFVWGIFFWQ
                     PLLSNLISCACITVYTIIGINFEEKKLVKEFGNTYVVYKSQTPMLIPKLFK"
BASE COUNT          551 a          389 c          378 g          480 t
ORIGIN      
        1 ataattaaga actgcaatag atatgcctgt ttgggaaact ccagccggca ttaaggaccg
       61 gcacccgtgc cgatggcgac ctttatacac atgaatgtga gtataagtac aaattttccg
      121 catgcttttt cttattggga actatgattc aatattcggt ttccgcaata gaatttttcg
      181 aaaataaata atgcaggttc agtttcgtgt gagcgagtgg ttcggcgcgc aataatatta
      241 ttttggagtg ggaaacaata gtttttcaat gaggagacag atgaaatagg ccagcaaagt
      301 accgaccgca taacaaataa tatcactcca caaaaatcca agaccaaaaa gagcttcgcc
      361 cacaacggtt gaccggatgc tatcgatcca tgcggcatga tacaactgcg aagtttcaac
      421 cagtaccccg agggagaagt taaggaaagc aagtcttgct aaagaggtat gaataaaaat
      481 tatccgcagg aagaaaagga attgcccggc ccaaattgta tccccgccgt acttagcaat
      541 gaacgcagga aaccatgttg cgtgcaaacg tgttgcaaag gcaagccaaa tgcaaaaaat
      601 taaaagcagt aaatagatga gccttcgctt aagaagcata aaataaaacc tgataacctt
      661 cgtccatcgg tggaccgata tccatcaatg accatagaaa tttgttagaa tttttagccg
      721 tccatgatcc ccgggtaact tgcaaataac aatgtcgatt tgatgttatc ggatgagcag
      781 acatcagttc caattcccta agagtcttct tattactacg atttgcccaa cgtggtagct
      841 gttgtgatct gctataagca acgcttcgcg caacaaagtt tggccgctgc catgtgagat
      901 cggtttaaaa agatcaccgg catgagcatg gagcaaatca ataaacgagc cctggtcttc
      961 attgatttgc tttatacagt cgttccatgc tgcttcactt tccggcgcat cttcctgcgg
     1021 ccaatagtct tccggccatt tcatttcttt ataattctta ttgcgtgaga aatcaaggat
     1081 gtcccactgc gcgattcgaa tatgttcggc gatctgccaa atgctatagg taagtccacc
     1141 tggttttttt cccagcagct caaacggaat atccttcacg gcgtcattta atgttacatg
     1201 tgcatggccg ttttgcagaa gttcaactaa ttgctgaatg agtttaccga catctggctg
     1261 actgttttgt tctttcattt actacaaatt gaatgataaa attattgaca gatgatgaat
     1321 tgaaaatgta aattgctcat ttaaatagct taggaataag catcggggtt tgtgacttgt
     1381 agacgacata agtgttacca aattctttca cgagtttttt ttcctcaaaa ttgatcccaa
     1441 tgatcgtata gacggtgatg catgcgcacg aaatgagatt gcttaataac ggctgccaaa
     1501 agaaaatgcc ccacacaaac agcagtgtgg cagcgtaaag aggatgtcgc acgtacttgt
     1561 aaaaatccgt cctgatcagc tgctgcgtca attttttttt cctgaatatg tctgccccgc
     1621 tcagatcgaa gaaaaaccgc cgcgtaaaga gcaacatcac caggccgcca aaggaaattg
     1681 cgccgacagc gatgcccctt tgaagtatac ttgcgctcca aagcatcaca ctttgcatcg
     1741 agaaatgata ccacaagacg atcgccagcg taacaactgc aatgcacgaa tatgagat
//
LOCUS       DASQJI010000125        10004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_624396,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000125 DASQJI010000000
VERSION     DASQJI010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10004
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624396"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VEV83_03700"
     CDS             <1..696
                     /locus_tag="VEV83_03700"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HYK44246.1"
                     /translation="LALTATFGMLMLNAQTLDNTIKQRTINVNGSAQMEITPDEIYVQ
                     VELREYNKKNGDKVDIETIRNQFLAAAKSMGIADTDVVVQGYSGWDGNYWWYQKNKKK
                     NPDMKAGINYEVKVKTVDQMDQLVDKLDDEATQNFSISRVWHSRMEELKKQLKIQAVK
                     AAKEKASYLAEAIGEHVGQALTINDPNENTPYPQPYYANKMVAQADNSAPMNVDFKKI
                     KLQFDVNVIFELK"
     gene            824..1921
                     /gene="dprA"
                     /locus_tag="VEV83_03705"
     CDS             824..1921
                     /gene="dprA"
                     /locus_tag="VEV83_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HYK44247.1"
                     /translation="MPKDLLYQIALTLIPNVGCVQAKILVEKYETAENIFRAKKKELG
                     LIENIGVVRASAIKAFDDFSKAEDEIRFVEKYKLLPLFIGDINYPKRLLHCYDSPTLL
                     YYRGTADLNAPKVISIIGTRNNTDYGKQMTEKIIADLKERNILIISGLAFGVDAIAHR
                     AALQNGLETIGVLAHGMHTIYPRQHKSLAKEIMHHGGLLTEFRNDEKPDKHNFPKRNR
                     IVAGIADATIVIETAVKGGSMITAELANNYNRDVFALPGRTTDSKSAGCNYLIQNNKA
                     ILFTDAREMLESLGWQEKTQTKKLQRELFVELTDDEKLLVEILKEKETVHIDQLNLQS
                     NLSSSSIAAAILNLELQGVLAALPGKMYRLN"
     gene            1992..3272
                     /gene="glyA"
                     /locus_tag="VEV83_03710"
     CDS             1992..3272
                     /gene="glyA"
                     /locus_tag="VEV83_03710"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HYK44248.1"
                     /translation="MQKDTAIFSLIQKELDRQRRGIELIASENFVSLQTMQGMGNVMT
                     NKYAEGYPGRRYYGGCEVVDEAEQLAIDRLKQIFNIEYANVQPHSGAQANAAVMLGIL
                     QPGDDILGLDLSMGGHLTHGSAVNFSGKLYKPNFYGVGRETGTVDYDMLEVKAKEIKP
                     KLIVCGASAYSRDWDYQRIRKIADEIGALIMADIAHPAGLIAKNLLNDPFDHCQIVTS
                     TTHKTLRGPRGGIIMMRKDFENPFGLKDNKGNVRMMSNVLDMAVFPGTQGGPLEHIIA
                     AKAISFGEILTDEFTAYAKQIIQNAQAMSKVFIEKGYNIVSHGTDNHLLLIDLRNKNI
                     SGKKAEAVLGKADITVNKNMVPFDDKSAFVTSGIRLGVPAITTRGMQEEHMRFVVDNL
                     DSALTHADDDGCLSSIRKRVNEFMQQFPLYPELG"
     gene            3481..4227
                     /locus_tag="VEV83_03715"
     CDS             3481..4227
                     /locus_tag="VEV83_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44249.1"
                     /translation="MCSCYAQPSPKNKEIKCDAKIEREYTDGPASIAFIHLHANETTA
                     LNAVRQFLERNKGSLFYVKQREARNVSLVIHDSIFQFDPNRMFTRAGRKANLNPYSVT
                     ADSAVKMFASEIVSQLHSYRIVISLHNNTSSNFSISSYKKGGEFESEASRVYMNRKMD
                     EDDFVFTTDENIFNKCRKQKLNVVLQDNVRRTDDGSLSVYCANVKLSYVNIEAEFGHA
                     DQQLKMLEFIYQVVSAGSEERSYAAEKSGE"
     gene            complement(4254..5120)
                     /gene="sucD"
                     /locus_tag="VEV83_03720"
     CDS             complement(4254..5120)
                     /gene="sucD"
                     /locus_tag="VEV83_03720"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HYK44250.1"
                     /translation="MSVLLNKNSKVIVQGFTGTEGTFHAGQMIEYGTNVVGGVTPGKG
                     GSTHLDRPVFNTVADAVKATGANVSIIFVPPAFAADAIMESADAGIALVVCITEGIPV
                     QDMVRVKNYLQGKQTRLIGPNCPGVITAEEAKVGIMPGFIFKKGRIGIVSKSGTLTYE
                     AADQVVKAGLGISTAIGIGGDPIIGTTTKEAVELFMNDDETDGIVMIGEIGGGMEAEA
                     ARWIKDNNRKPVVGFIAGQTAPPGRRMGHAGAIIGGADDTAAAKMKILKECGVSVVAS
                     PADIGKTIAEKV"
     gene            complement(5277..5765)
                     /locus_tag="VEV83_03725"
     CDS             complement(5277..5765)
                     /locus_tag="VEV83_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HYK44251.1"
                     /translation="MENRTANTRVNFFESFAAKVTKGAGSTTAFLVALGFVLGWVFTG
                     PIFDYSQNWQLVINTGTTIVTFLMVFLIQKSQNKESLAVQLKLNELVAAHEFASNRLV
                     DVENMTEEELKVIQKYYSKLKEFTKKEESLQQSHSIDEAHELHEFKKDMEEELRDNVK
                     KK"
     gene            complement(5855..7024)
                     /locus_tag="VEV83_03730"
     CDS             complement(5855..7024)
                     /locus_tag="VEV83_03730"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK44252.1"
                     /translation="MHRKYFLDIFFVLLFCLLSVRCSWVSPHNANIPKQDPSLHATDF
                     HFDSLSPQQKDYYRNAISAFYETNLASKGFNGAILVAKNGQVLFEQYKGYGNFVTKDT
                     LTEHTPFHLASISKTFTGMAVLKLWEDGKLSLDDSLQKYFPQFPYRGVTIRTLLSHRS
                     GLPNYLYFMDSLWDKTKEATNQDVLNAMIVHHPAAYSLPNTRFEYCNTNFLLLSMVVE
                     KITGQPFPEYMKQHVFEPLGMHDTYIFSIKDTAHYVPTWSVTQPFPMDQYDCTYGDKN
                     VYSTVRDLFLWDKSLYEHTFLKKSTLDMAFTPLSNEHRSMHNYGLAWRLFINNGDTVI
                     YHNGKWHGTNTSFVRLVKDTATIIVLGNKQNGNIYHAKEMETIFNGKQEMDNLDE"
     gene            7121..8335
                     /locus_tag="VEV83_03735"
     CDS             7121..8335
                     /locus_tag="VEV83_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HYK44253.1"
                     /translation="MVIILFDTNERQNLYPLTEIRAVSALRCGIFSAKERWEMISGLP
                     VFVQTEGYLMRLYDQIPQDEYLWIDASLWDEPSLRAQILSLQTGEALEDEHGFIAGRI
                     TCEAGEFDYRQPEKFFSKLTSVENARRLQFPWQIFQWNDEQLRKDFLLIFSRLTSQPI
                     STTNQIVQPENIIAEEGAVVEHCIINGSTGPVYIGKNAVVMEGTMIRGPVAICEGAVV
                     KMGARLYGATTIGPYCIAGGEIKNSVMQSFSNKAHDGYLGDSVIGSWCNLGAGTSNSN
                     IKNTAGQVNVWHNRSGEYVSIGAKCGVIMGDYSRTAINTSINTGSVIGVCCSLFGEGF
                     PPRHIRNFNWGFQTPTPYELEKALIDMNNWQKLKGKELTEEEVSVLRYIFELDLKKAK
                     GTRRRAVSSRTN"
     gene            8351..9112
                     /gene="tpiA"
                     /locus_tag="VEV83_03740"
     CDS             8351..9112
                     /gene="tpiA"
                     /locus_tag="VEV83_03740"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HYK44254.1"
                     /translation="MRKQIAAANWKMNLTIDKAEMLLHTVLSQLPILTEDQQVVFAVP
                     FPYLLPAQKIVDSMPSIFVAAQNCYSKLSGAYTGEVSVEMLRSINIPYVVLGHSERRQ
                     YFQESNQFLAEKLNICLAHKITPIFCCGEPLNIREAQTQNEFVAKQLEESLFHFSADD
                     LKKIVIAYEPIWAIGTGKTATSLQAQEMHAYLRSVLADKFGKAVADSITVLYGGSVKG
                     SNAKELFEQPDVDGGLVGGASLVAEEFVAIVNSLK"
     gene            9129..>10004
                     /locus_tag="VEV83_03745"
     CDS             9129..>10004
                     /locus_tag="VEV83_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44255.1"
                     /translation="MDLKKSFAQSIIWRGFYFFSLLLVNIFLSRYLQAAETGMLYFIS
                     IILSFMQVALSLGVESGVTYFASANIIERNKLITVMGLWSGAAGIVTIGLIYGYFVLH
                     PDPALVLPYCIYGFLYVSGQSLATYATSMYYTTENYFMPNFLLGIVNLVFVLVIPGKN
                     ESTTPAEIQRVIYLYFATFFVAGLLAYFSFIIQNRKLGSFGFPGKKHLFQFFRYSITA
                     LAANVIFFMVYRIDYFFVNSSPVCTDADLGNYIQVSKLGQMMLIVPQIIASVVFPRTA
                     SGIDRRMLNNAILVMA"
BASE COUNT         2805 a         2117 c         2329 g         2753 t
ORIGIN      
        1 ttagcactca ctgcaacttt tggaatgctg atgcttaatg cacagacttt ggataacacg
       61 atcaaacaac ggaccatcaa tgtgaacgga tcagcccaaa tggaaattac acccgacgag
      121 atctatgttc aagttgagct acgcgaatac aacaaaaaga acggagataa ggtagacatt
      181 gaaacgatac gcaaccagtt cctggcggca gcaaaaagta tgggaatagc tgataccgat
      241 gtggtcgtgc agggatactc gggatgggac ggtaactatt ggtggtatca aaagaacaaa
      301 aagaaaaatc ccgatatgaa ggccggcatt aattacgaag taaaagtgaa aacggttgat
      361 caaatggacc agcttgtgga taaactggat gacgaagcaa cacaaaattt ttccatcagc
      421 cgtgtttggc atagcaggat ggaggagtta aaaaagcaat taaagataca ggcggtgaag
      481 gccgccaaag aaaaagccag ctatctcgcg gaagcgatcg gtgaacatgt tgggcaggct
      541 ttaacgataa acgatccaaa tgagaatacc ccgtacccac agccatatta tgcaaacaaa
      601 atggtggcac aggccgacaa ctcggctcca atgaacgttg actttaagaa gatcaagctc
      661 cagttcgatg tgaatgtgat cttcgaatta aaataggttt cataatcgtt cattttttaa
      721 gcaggtggta aatgcctcct gcttttttat tttatttcaa tcgaccttct taaataattt
      781 tttaccttca gtttccctta caccatcgac taattacttt tcaatgccta aagacctttt
      841 ataccaaatc gcacttacgc ttatccctaa tgttggctgt gtgcaggcca agatcctggt
      901 tgagaaatat gagactgcgg aaaatatttt tcgtgcgaaa aagaaagaac ttggtttaat
      961 tgagaacatt ggcgtggtaa gggcgtcggc gataaaagcg tttgatgatt tttcgaaagc
     1021 cgaggacgag atcaggtttg ttgaaaaata caaattgttg ccgctgttca tcggcgatat
     1081 taactatccg aaacgattat tgcactgcta cgattcgccc acacttttat attatcgagg
     1141 gaccgcagac ttaaacgcgc cgaaggtcat cagcattatt ggcacaagga ataatacgga
     1201 ttatggtaaa cagatgacag agaaaataat tgcagatctg aaagaaagaa atattctcat
     1261 cattagcggc cttgcgttcg gagtagacgc gatcgcacac agggcagctt tgcaaaacgg
     1321 tctcgaaacc attggcgtgt tggctcacgg tatgcacacg atctatccgc gccagcacaa
     1381 atctttggca aaagaaataa tgcatcacgg cggtttgctc acagaatttc gaaacgatga
     1441 aaaaccggat aaacacaatt ttccaaaacg caaccgtatt gtagccggca tagccgatgc
     1501 gaccatcgtg atcgaaacag ccgttaaagg aggcagcatg atcactgcgg aactggcgaa
     1561 caattacaac cgtgatgtgt ttgcattgcc tggccgcacg acagattcga aaagcgcagg
     1621 ttgcaactat cttattcaaa ataataaggc aatacttttc accgacgcaa gagagatgct
     1681 tgaaagtttg ggttggcagg aaaagacaca aaccaaaaaa ttgcaaaggg aattattcgt
     1741 cgaattgact gatgatgaaa aactgctcgt tgagatcctg aaggaaaagg aaacggtcca
     1801 cattgatcaa ctcaacctgc aaagtaattt aagcagcagt tccattgctg ctgcgatcct
     1861 gaatctcgaa ctacagggtg ttttggccgc cctgccaggc aaaatgtaca ggctaaattg
     1921 agattttcca catgacgttt gaagagctgc tttagtgcct gctaactgtt acttttgcca
     1981 aaattgtaag catgcagaaa gataccgcaa tcttttctct cattcaaaag gaacttgacc
     2041 gtcagcgccg tggcatcgaa cttatagcga gtgaaaattt cgtcagcctg caaacgatgc
     2101 agggaatggg gaatgtgatg acgaacaagt atgctgaagg ttatccgggg cgcaggtatt
     2161 acgggggctg cgaggtggtg gatgaagcgg agcaacttgc gatcgatcgt ttaaaacaaa
     2221 ttttcaacat agaatatgcg aatgtgcagc cacacagcgg agcgcaggca aatgcagcgg
     2281 ttatgcttgg gattcttcag ccgggtgatg atatccttgg tttagatcta agcatgggcg
     2341 ggcatcttac gcatggttct gcggtgaatt tcagtggcaa attatacaag ccaaatttct
     2401 acggcgtagg cagagaaacc ggaacggtag attatgacat gctggaagta aaagcgaaag
     2461 agatcaagcc aaagcttatc gtatgcggcg ccagtgcgta cagccgggat tgggattatc
     2521 agcggatcag gaagatcgct gatgaaatcg gggcattaat aatggctgac atcgctcacc
     2581 ccgcaggctt gatcgcaaaa aatctgttga acgatccgtt tgatcattgc cagatcgtga
     2641 cctcgacaac acacaaaaca ttgcgcgggc caaggggggg cattataatg atgcgaaaag
     2701 actttgaaaa cccgtttggt ttaaaggaca ataaagggaa tgtgcgcatg atgagcaacg
     2761 ttcttgatat ggccgtattt ccgggcacac agggcggacc gctcgaacac attattgcag
     2821 cgaaagcaat ttcgttcgga gagatcctga ccgatgaatt taccgcgtac gcaaagcaga
     2881 tcattcaaaa tgcgcaagct atgtcgaagg tcttcatcga aaagggatat aatatcgtaa
     2941 gccacggaac agataatcac ttgttgttga ttgacctgcg aaataaaaat atttcaggca
     3001 agaaagcgga agctgtgctg ggtaaagctg acataacagt gaataagaac atggtacctt
     3061 ttgatgacaa atcggcgttt gtaacgtcag gcataagatt aggcgtcccg gcgattacaa
     3121 cgcgcggcat gcaggaggaa catatgcggt ttgtggtaga caatctcgat agcgcactga
     3181 cgcatgcaga tgatgatgga tgtttgagta gcattagaaa acgtgtgaat gaatttatgc
     3241 agcagtttcc gctatatccg gagctaggtt aagggaatgc ctggccttgt tagctaggtc
     3301 ctaccaattt ggttcctggt tttttttgat ttgttcttgt gattttgctt tttggttctt
     3361 gttttttgtt tcttggtttt tgtttcttgg ttcttgtgat ttgtttcttg ttattgtttc
     3421 ttttcacccg ctcctctgct tatgagaact cttctttctt gttgtacttt atacttctgc
     3481 ttgtgttcgt gctatgccca gccttctccg aaaaacaagg aaataaaatg tgatgcaaag
     3541 atcgaaagag aatataccga cggtccggca tcgatcgcct tcatccatct tcacgcaaac
     3601 gagacaactg ctttgaatgc cgtcagacaa tttctcgaac gcaataaagg cagtttattt
     3661 tatgtgaagc aaagagaagc aagaaatgtc agcctggtta tacacgattc aatttttcaa
     3721 tttgatccca accgcatgtt tacgagggcc gggcggaaag ccaatctaaa tccatattca
     3781 gttaccgcgg acagcgctgt taaaatgttc gcgagtgaaa ttgtgtcgca gttgcattca
     3841 taccgtatag tcatctcgct gcataacaac acgtcttcaa acttttctat tagcagctac
     3901 aaaaaagggg gagaatttga aagtgaagcg tcgcgggtat atatgaatcg aaaaatggat
     3961 gaggacgatt ttgttttcac gaccgacgaa aacattttca acaaatgccg aaagcaaaag
     4021 ctaaatgttg tactgcagga caatgttcgc cgaacagatg atggatcgct gtctgtttat
     4081 tgtgccaacg tcaagctttc ttatgtaaac attgaagccg agtttgggca tgctgatcag
     4141 caattgaaaa tgcttgaatt tatttaccag gttgtttctg cggggtctga agaaaggtcg
     4201 tatgccgcgg aaaaatcagg tgagtgagac ggaggttgca tcagtagggc taactaaacc
     4261 ttttcggcta tcgtttttcc aatatccgct ggactggcca caacacttac cccgcattct
     4321 ttcaatattt tcatttttgc tgcggcggta tcgtcggctc cgccaatgat tgccccggca
     4381 tgccccattc ttcttccggg aggtgcggtt tgccctgcga tgaaaccgac aacaggctta
     4441 cggttattgt cttttatcca tctcgcagct tctgcttcca tgccgccgcc gatctcaccg
     4501 atcataacaa taccatcagt ctcatcgtcg ttcataaaaa gttcaaccgc ttcttttgtg
     4561 gttgttccga tgataggatc gccgcctatt ccaatcgcgg tgctgatgcc cagtcccgcc
     4621 ttcaccacct ggtctgccgc ttcgtatgtc agcgtcccgg acttcgacac aatacctatt
     4681 ctgcccttct tgaaaataaa accaggcata atcccaacct tcgcttcttc tgcggttatt
     4741 acgccggggc agttaggtcc gatcagccgc gtttgttttc cctgcaaata atttttcacc
     4801 cgcaccatgt cctggacagg aattccctcg gtgatgcaaa ctacgagtgc aattcctgca
     4861 tcggcacttt ccatgatcgc atcggcggca aatgccggtg gcacgaatat gatgctcaca
     4921 ttggcgcctg ttgctttaac tgcatcagcg accgtattga atactggcct gtcgagatgt
     4981 gtgctgcctc ccttcccggg ggtaactcct cctactacgt tagttccata ttcgatcatc
     5041 tggccggcat gaaaagttcc ttcggttcca gtaaatccct ggacgatgac tttggaattt
     5101 ttgttcagca atacgctcat gcagaatttt ttgtgtttaa agatgcacaa aaataggaga
     5161 gacaaatgag aaatgtgaaa cactttgccg gctcaaacaa atcagtatgg taatgcgaaa
     5221 tttatcaatt gtcgagatca cgcgcaaata cgacgaaact gacgacttta acagcgttat
     5281 tttttcttta cgttatcacg cagttcctcc tccatatctt ttttgaattc atgcagttca
     5341 tgggcttcgt cgatcgaatg tgattgctgc aggctttctt ctttttttgt aaactctttt
     5401 aatttcgaat agtatttctg gatcactttc aattcttctt cggtcatatt ttctacatca
     5461 acaaggcggt tactggcaaa ttcatgagct gccaccagct cattcaattt caactgcacc
     5521 gcaagagatt ctttattctg agatttctgg atcaggaaga ccattaagaa agtcacgatg
     5581 gtcgtgccgg tgttaatcac gagttgccag ttctgtgaat aatcaaaaat aggccctgtg
     5641 aagacccatc cgagcacgaa acccagtgcc acaagaaatg cggttgtact tccggcgccc
     5701 ttagtaactt ttgcggcaaa gctttcaaaa aaatttacgc gggtatttgc ggttctattt
     5761 tccataaatg gtttgtttaa acttttaatc aaaagattat accaaaaaaa tattggtgcc
     5821 ggaaaaagct gcagaatttg gtaaggcgac gaaattattc atccaggtta tccatctcct
     5881 gcttaccatt gaagatggtt tccatttctt ttgcgtgata gatgttgccg ttttgtttgt
     5941 tgcccagtac aatgatggtg gcagtgtctt ttacaaggcg tacgaaagaa gtattggtgc
     6001 catgccattt accattatgg tagataacgg tgtctccgtt gttgataaac agccgccacg
     6061 ccaggccgta gttgtgcatg gaccggtgtt cattgctcaa tggcgtgaaa gccatgtcga
     6121 gcgtagattt tttcagaaac gtatgttcgt ataatgattt gtcccacaaa aaaagatcac
     6181 gtaccgtgct gtatacgttt ttgtctccgt aggtgcagtc gtactggtcc atcggaaacg
     6241 gttgagtcac actccaggtg gggacataat gtgcggtgtc ttttatagaa aaaatgtagg
     6301 tatcgtgcat gcccaacggt tcgaaaacat gctgtttcat atattccgga aaaggttgcc
     6361 ccgttatttt ttcaacaacc atcgacagca acaagaaatt tgtgttgcag tattcgaaac
     6421 gcgtattggg caaactgtac gctgccgggt gatgaacgat catcgcattt aaaacgtcct
     6481 ggttcgttgc ttcctttgtt ttgtcccaaa gactgtccat gaagtataaa taatttggta
     6541 ggccgctgcg atgcgataac aacgtcctta tcgtgacgcc gcggtaaggg aattgaggaa
     6601 aatatttttg cagggaatcg tcgagcgaaa gctttccatc ttcccataat ttcagtacag
     6661 ccataccggt aaatgttttg gagatggaag caagatgaaa aggagtgtgt tctgttaggg
     6721 tgtccttggt gacaaagttg ccataccctt tgtattgttc aaaaagcacc tggccgttct
     6781 tagcgacaag aatagcgccg ttaaatccct ttgatgcaag gttcgtttca tagaatgcgc
     6841 tgatcgcatt tctgtaataa tctttctgtt ggggtgaaag ggaatcaaaa tgaaagtcgg
     6901 tcgcatgcag agagggatct tgcttcggta tattcgcatt atgcgggctt acccacgagc
     6961 aacgaacaga cagaaggcaa aacaacaaaa caaaaaaaat gtctaaaaaa tattttctgt
     7021 gcatgaacgg ctgctttatt gctataacaa cacggtatcc aaagaaacgg aaacttaata
     7081 ttttcgcttc cgtatctttc tcacaatacc tttataactt atggtaatca tcttatttga
     7141 tacgaacgaa cggcaaaatt tatacccact tacagagatc cgagcggttt cggcgttgag
     7201 atgcggaatt ttttcagcca aagagcgctg ggagatgatc agtggattgc ccgtgtttgt
     7261 tcaaactgag ggatatctca tgcgcctgta tgaccagatt ccgcaggacg aatacttatg
     7321 gatcgacgca tcgttgtggg acgaaccttc tctgcgtgcc caaatacttt cattgcagac
     7381 cggagaggcg ctggaagatg agcatggttt tatcgccggc aggatcacct gcgaagctgg
     7441 ggagttcgat taccggcaac ccgaaaaatt tttttcaaag ctgacgagcg tggagaacgc
     7501 acggcggctt cagtttccgt ggcagatatt tcagtggaat gacgaacaat tgaggaaaga
     7561 ttttttattg atcttttcgc ggcttacttc gcaaccgatt tctactacaa atcaaattgt
     7621 tcaaccggaa aacattatcg ccgaggaagg cgcagtggta gaacattgca ttattaatgg
     7681 atcgaccggt cctgtgtata ttggcaagaa cgcagttgta atggagggga caatgatccg
     7741 cggccccgtt gcgatttgcg aaggtgccgt ggtaaaaatg ggagcaaggt tatatggtgc
     7801 caccacgatt gggccttact gtattgccgg cggcgaaata aagaatagcg tcatgcagtc
     7861 gttcagcaat aaagcccacg atggttacct gggagattcg gtaattggtt cgtggtgcaa
     7921 tttaggagca gggacaagca acagcaatat taaaaatacg gcgggacaag tgaatgtttg
     7981 gcacaatcga tccggcgaat atgtaagcat cggtgcaaaa tgcggtgtga tcatgggcga
     8041 ttactcgcgt actgccataa acacttcgat caacaccggc tctgtgatcg gcgtctgctg
     8101 cagccttttt ggtgagggtt ttccgccacg gcatatacga aattttaact ggggatttca
     8161 aacaccgacc ccatatgaat tagaaaaagc acttatcgac atgaacaact ggcaaaaatt
     8221 aaaaggcaaa gagttaacag aagaagaggt ttctgtgtta aggtatattt ttgaacttga
     8281 tttaaaaaag gcgaagggaa cccggcgccg cgcagtttca tcacgaacaa attaaaccag
     8341 caaacataac atgagaaaac aaatcgcagc cgctaactgg aaaatgaatc ttacgatcga
     8401 taaggccgaa atgttactcc acaccgtgct gtcgcagcta cccattttaa ctgaagacca
     8461 gcaagtagtt ttcgccgtgc cgtttccata tttattaccg gcgcaaaaaa tagttgacag
     8521 catgcccagc attttcgtcg ctgcgcagaa ttgttacagc aaattgtccg gtgcgtacac
     8581 cggtgaggtc tctgttgaga tgcttcgttc gataaatatc ccgtacgtcg tgttgggcca
     8641 ttctgagcga aggcagtatt tccaggaaag caaccagttc ctggccgaaa aattaaatat
     8701 ctgccttgca cataagatca caccgatctt ttgctgcgga gaaccgttga atattcgcga
     8761 agcccaaacg caaaatgaat ttgttgcaaa gcagcttgag gaatcgttgt ttcatttttc
     8821 cgcggatgac cttaaaaaaa tagttatagc atatgaacct atttgggcga tcggcaccgg
     8881 taaaaccgca acaagtctgc aagcacagga aatgcatgcg tacctgcgtt ctgtgctcgc
     8941 tgataaattc ggcaaagccg ttgcagattc gatcaccgtc ttatacggcg gcagtgtaaa
     9001 aggctctaat gcaaaagaat tatttgaaca gcctgatgtt gacggcggcc ttgttggcgg
     9061 ggcttcgctc gtagcggaag aatttgttgc catcgttaac agtttgaaat aacctactta
     9121 aaactgtaat ggatctaaaa aagtcatttg cacaaagcat catatggcgg ggtttttatt
     9181 tcttctctct tttactcgta aatatttttc tttctcgtta cctgcaggca gccgaaaccg
     9241 gcatgctgta ttttatttct attatcttat cgttcatgca ggtggccttg agtctcggcg
     9301 ttgaatcagg agtgacttat tttgcttcag caaacattat tgaacgaaac aaacttatca
     9361 ccgtaatggg tttatggagc ggggctgcag ggatcgttac gatcggcctc atatatggat
     9421 acttcgtttt acatccggat ccggcacttg tgttaccgta ttgcatttat ggctttttat
     9481 atgtcagcgg gcagtcgctc gcaacatatg cgacctcgat gtattatacc acggaaaact
     9541 atttcatgcc taactttctt ctgggcattg tgaacttggt tttcgtgctg gtgatcccgg
     9601 gaaaaaatga gtccacaacg ccggcagaaa ttcaacgggt gatatactta tactttgcta
     9661 ccttttttgt cgccggtcta ctggcgtatt tttctttcat catccaaaac cggaagttag
     9721 ggtcattcgg gtttccgggt aaaaagcatt tgtttcagtt tttcagatac tccatcactg
     9781 cccttgcagc aaatgtgata ttcttcatgg tgtatcgtat agattatttc tttgtaaaca
     9841 gcagccctgt ttgtactgat gctgacctgg gcaactatat acaggtttca aaactcgggc
     9901 aaatgatgtt gatcgttccc cagatcattg ccagcgtcgt gttcccgcga acagcaagtg
     9961 gcattgacag aagaatgctt aacaatgcga tccttgtaat ggca
//
LOCUS       DASQJI010000126         7025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1392920,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000126 DASQJI010000000
VERSION     DASQJI010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7025
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392920"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VEV83_03750"
     CDS             <1..852
                     /locus_tag="VEV83_03750"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYK44256.1"
                     /translation="GDEVIGTKQDYPNMINAWKQRALRDGIQYKQISFDFPIENDQVI
                     VDAYASAITPKTKVVHVTHMINWVGQLMPVEKIASMAHAKGIEVICDSAHAFGLMDFK
                     IPDLQCDYFGTSLHKFLSAPIGSGMLWIKKEKIAGIWPLVCNDKPHSADIRKFETLGT
                     RSFPIEQGIGEALNFHNAIGAKRKEDRIRYLKNYWAEKVQNVPGIKLSTSLKPQYSCA
                     ICGVSVDGITPAELESALFNKYKIHTVGIVWENISCVRVTPHVYTTLQDLDTLVTGLT
                     EIAEKKG"
     gene            complement(862..3621)
                     /gene="ligD"
                     /locus_tag="VEV83_03755"
     CDS             complement(862..3621)
                     /gene="ligD"
                     /locus_tag="VEV83_03755"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HYK44257.1"
                     /translation="MSLSLYKQKRSFNKTPEPEGGRSASKNELVFVVQKHDASRLHYD
                     FRLEMEGVLKSWAVPKGPSLDPTEKRLAMMVEDHPFDYRTFEGIIPKGNYGAGTVMVW
                     DEGTYEPLHDPSTSKKENEKKLLHELHAGSLKIVMHGKKLKGEFALVKIKNSEDNAWL
                     LIKHRDKYATTDDVTKKDKSVVSKRSLEQIEKAGDRIWKSNRSSSNGKSTSKTPAKKV
                     EKKKIRPEENEQISELLKKGKRAPFPHDVRPMLASLADEPFDDPEWLFEIKWDGYRGI
                     SYLNKGKVEIQSRKNLSFTQKFSAVADALKEWDIDAVIDGEIVAMTDDGIASFQRLQN
                     YANNGSAAQLEYHVFDILWLNGKDLTCLPLIERKFILQKLVPGDSGIIRYSDHIEENG
                     RDFFRLATAKGLEGIMAKRADSVYTTNFRTRQWLKLKNNKILEAIICGFTEGRKSRKY
                     FGAVILGKYEGNKLIYIGHSGTGFTDKSLKELDKKLQPLVTDKMPFDKKPKTNMPVTW
                     VQPKLVCEVKYGEITDEGILRHPVFMGLREDKEAKDEMNVEVVDADERNVSKGRPRSS
                     TVRAETSKANSDAPKKPATKGAISINDKTEHKAAGNNKKKTTGKNDLLARGSKEELIN
                     IQGHEIKFTNLDKVYWPVEKITKRDMLNYYYQVMPYILPYMKDRPQSLNRHPNGINGP
                     SFYQKNVGGKVADWITTYDYQSDSSGDKKFLVCSDEATLMYMASLGCIEMNPWHSRIQ
                     SPENPDWCVIDLDPDDNSFNQVIEAAQAVKKILDAIDVTSYPKTSGSTGMHIYIPLGA
                     KYSYDQSRMLAEIIVNIVYHEIPSFSSLERNPSKRKGKIYLDFLQNRSIQTIAAPYSL
                     RPKPGATVSTPLNWDEVKKGLTVKQFNIHTILDRLKNVGDIFEPVLGKGIDLLKTLKK
                     VNSLR"
     gene            3730..6117
                     /locus_tag="VEV83_03760"
     CDS             3730..6117
                     /locus_tag="VEV83_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-rhamnosidase N-terminal
                     domain-containing protein"
                     /protein_id="HYK44258.1"
                     /translation="MRKIISLAALILIFQHAFSQNISPDILSKTWNAYWIDVPGCKPH
                     DYGVYHFRKKISLREKPSQFIIHVSADNRYKLFVNGQMASFGPAKGDLYHWNFETVDI
                     APYLTEGENVLAAVVWNFGEERAEWQISYQTAFILQGNSSTEYIANTDTSWKCIQNSA
                     YSALQPQLTYTYYAAGPGEKVDMNLWPSGWEESDLDDNTWKNAESIFRGVPKMAFDFS
                     TGWMLVPRSIPMMEITTQRLEKIRMQTGTNIGENFLQGDHAVTIPAHATVHILFDQSF
                     LTTAFPVLKFGKGKKADVSLTYAEALFINEGDSKNWRAQNQKGNRNEVEGKRMVGLKD
                     EVISNGKEHQSFTALAWRCYRYVALDITTHDEPLLVQDIYGLYTGYPFTMNARFESGN
                     DTLHKILETGWRTARLDAHETYTDCPFYEQLQYVGDTRIQAMVSLYNSGDDRLMRNAI
                     EQIANSMLAEGITESRFPTRSHQEIPTFSLIWISMLHDYWMYRGDSNFIRNQLRISRQ
                     VLSFFHNLQTKDGSLHRVPYWIFTDWVEKWDGGIAPIDKNGYSSLLDLQLLMAYEAAE
                     DLERNSGMNIYAEMYDSAIVQLKKSIYANYWDDNRKLLSDTKEKKFFSQHANALAILT
                     GVINRDDVHVLGQKLLSDTSLAPASVYFRYYLYQALTKAGFGDQYLNWLGIWKQNLAM
                     GLTTWAEIDDINRARSDCHAWGSSPNIELYRIVLGIDTDAPGFSKVKIEPHLGALTKV
                     SGSIPHPKGNVSASYELKNGNWSINIQLPQEITGKFLWKGSEYDLKEGENKFALE"
     gene            complement(6129..6584)
                     /locus_tag="VEV83_03765"
     CDS             complement(6129..6584)
                     /locus_tag="VEV83_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HYK44259.1"
                     /translation="MSSNTPSYLWSVITNRCPRCRRGDIFEYHNAYALRKGRYMKMHD
                     HCPLCGQATDIEVGFYYGTGYVSYFLTVFLSVLSFALWWLLIGISVYDNRVFYWLAIN
                     SVVLLATQPLLMRFSRTLWLSWFVKYDPNWESERAKDPERIIKEEMGNW"
     gene            complement(6630..>7025)
                     /locus_tag="VEV83_03770"
     CDS             complement(6630..>7025)
                     /locus_tag="VEV83_03770"
                     /inference="COORDINATES: protein motif:HMM:NF014874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HYK44260.1"
                     /translation="SNSRSQLIEIRTNKLILDAYNANPTSMKAAIENFARMHEKNKVL
                     ILGGMMELGAGSVEEHRAIIELIGRYRWNSVVLVGGDFKAINNSYMYFETADACLEWV
                     RKQNFHDSYFLIKGSRSIQLEKVVNGFKN"
BASE COUNT         1897 a         1576 c         1535 g         2017 t
ORIGIN      
        1 ggcgatgaag tgatcggcac aaagcaggat tatccgaaca tgatcaacgc atggaaacaa
       61 agagccttgc gcgacggcat acagtataaa cagatcagtt ttgattttcc gattgaaaat
      121 gaccaggtca ttgttgatgc atatgcgagc gctatcacgc ccaagacgaa ggtggtccat
      181 gttacacaca tgatcaactg ggttggccaa ctaatgcctg tggagaaaat tgcctcgatg
      241 gcgcacgcaa aaggaattga agttatctgc gacagtgcgc atgcttttgg gttgatggac
      301 ttcaaaattc ccgatcttca atgcgattat tttggaacga gtctacataa atttctgagt
      361 gctccaattg gaagcggaat gctttggata aagaaagaaa aaattgcggg catctggccg
      421 cttgtatgca acgataagcc gcatagtgcc gacattagga agtttgaaac tcttggcacc
      481 cgtagctttc cgatagagca ggggattggt gaagcattga attttcataa tgccatcggt
      541 gcaaagagaa aggaagaccg catacgatac ctgaaaaatt actgggcaga aaaagtgcaa
      601 aatgttcccg gtatcaaact aagcacgtcg cttaaaccgc agtactcgtg tgccatctgc
      661 ggtgttagtg tcgatggaat cacaccggct gagctcgaat ctgcgctgtt caacaaatat
      721 aaaattcata ccgttggtat tgtttgggaa aacatcagtt gtgtccgggt aacgcctcat
      781 gtctatacaa ccttacaaga tttggataca ttggtgacgg gactcacaga aattgctgaa
      841 aagaaagggt aacaaatgat cttacctcaa gctattgact ttttttaagg tcttcaacag
      901 atcaattcct ttgccgagca caggctcaaa aatatctcct acatttttaa gacgatcaag
      961 aatggtgtgt atgttgaact gcttaacggt taatcccttc ttcacttcat cccaattcaa
     1021 aggagtggaa actgttgcgc ctggtttcgg ccgtagtgaa tacggcgcag cgatggtttg
     1081 gattgaccgg ttttgcaaaa aatcgagata gatcttgccc tttcgtttcg aaggatttct
     1141 ttctaaactg ctgaaagatg ggatctcgtg gtagacaatg tttacgatga tctctgcgag
     1201 catcctgctt tgatcgtatg aatatttggc gccgagtgga atgtatatgt gcatgccggt
     1261 agagcccgat gttttcggat aagaagtaac atcgatggcg tccaaaatct tcttaacagc
     1321 ctgcgcagct tctataacct ggttgaagga attatcgtcg ggatcaagat cgatcacaca
     1381 ccaatctgga ttctccggtg attgaatgcg gctatgccac gggttcattt caatacagcc
     1441 taatgaagcc atatacataa gcgtagcctc atcggagcaa accaaaaatt tcttgtcgcc
     1501 gctgctgtcg ctttgatagt catatgtcgt gatccagtcg gcaacttttc caccaacatt
     1561 tttttgataa aaactcggtc catttatccc attcgggtga cggttcagcg actggggccg
     1621 gtctttcatg tatgggagaa tatatggcat tacctggtaa tagtaattca gcatgtcgcg
     1681 cttcgtgatc ttctccaccg gccagtaaac tttgtcgagg ttcgtaaatt ttatttcgtg
     1741 cccttgtatg tttatgagct cctcctttga tccgcgagct aataggtcat tcttgccggt
     1801 ggttttcttt ttattatttc cagcagcctt atgttcagtt ttatcgttta tcgaaattgc
     1861 gcctttggtt gctggtttct taggcgcatc cgagtttgcc tttgacgttt ctgctctcac
     1921 ggttgacgat cgaggtcttc ccttcgagac attcctttca tcagcatcca ccacttcaac
     1981 attcatttca tctttagcct ctttgtcttc tctcaatccc ataaacaccg ggtgccgtaa
     2041 aataccttca tcagttattt caccgtattt tacttcgcac accagttttg gctgaaccca
     2101 tgttaccggc atgtttgttt ttggtttttt gtcgaaaggc attttatcgg tcacaagtgg
     2161 ttgaagtttc ttatctaatt ccttcaacga cttgtcggta aagcctgtcc cgctgtggcc
     2221 gatataaatt agcttgtttc cttcatattt tccaagtatt acggcgccaa aatatttgcg
     2281 gctttttcgg ccctcagtaa agccgcagat aattgcctcc aggatcttat tattcttcag
     2341 cttcaaccat tgcctggtcc taaagtttgt tgtgtaaacg ctgtcggctc tttttgccat
     2401 gatcccttcc aaacctttcg cggtcgcgag ccgaaagaaa tctcttccgt tttcttcgat
     2461 gtgatcactg taacgaatga tgccgctatc tccaggcaca agcttttgca aaatgaattt
     2521 tcgctcgatc aacggcaggc aagtgagatc ttttccattg agccaaagaa tatcgaagac
     2581 gtgatattcg agttgcgctg cactcccgtt gttagcatag ttctgaagcc gctgaaaact
     2641 tgcgatgccg tcatcagtca tcgcaacaat ttccccgtca ataacagcat cgatgtccca
     2701 ttccttcaaa gcatctgcga cggcactgaa tttttgagtg aacgaaagat ttttcctgga
     2761 ttggatctca accttccctt tgttgagata gcttatgccg cgataaccat cccatttgat
     2821 ttcaaataac cattcgggat catcaaacgg ttcatcagca agcgaagcca gcattggcct
     2881 cacgtcgtgt gggaagggtg cccgtttacc cttttttaat agctcgctta tttgctcgtt
     2941 ttcctcggga cggatctttt ttttttcgac cttttttgca ggtgtctttg aagtgctttt
     3001 gccgtttgag ctactccggt tgcttttcca aattctatcg cccgcctttt caatttgctc
     3061 gaggcttcgt tttgaaacaa ctgatttatc ttttttcgtc acatcgtcgg tcgtagcgta
     3121 tttgtcgcga tgcttgatca ataaccacgc attatcttcg ctgttcttta ttttcaccaa
     3181 cgcaaattcg ccctttagct tcttgccgtg catcacgatc ttcaggctgc cggcatgtaa
     3241 ttcgtgcaat aacttttttt cgttttcttt tttactggtc gacggatcgt gcaagggttc
     3301 ataggtgcct tcatcccaaa ccatcaccgt tccggctcca taattgcctt taggaataat
     3361 tccttcaaat gtgcggtaat cgaaaggatg atcttccacc atcatcgcaa ggcgcttctc
     3421 ggtcggatca agagagggcc ctttcggaac tgcccaactc ttgagcacgc cttccatttc
     3481 gagccggaaa tcatagtgca accgcgaagc atcatgcttt tgtacgacaa acacaagttc
     3541 gttttttgat gctgatctcc ctccttccgg ttccggtgtt ttgttgaacg aacgtttttg
     3601 cttatacaat gaaagactca tgaacaagtg tttttataaa agtaacaaaa tgttcgccaa
     3661 aggaagtttg gcgacatggg ttcccgcacc aactttttaa tatgatttat cttcaggaaa
     3721 attttgttca tgcgaaagat catttctctg gcggcactta tcctgatttt ccaacacgca
     3781 ttctcacaaa atatcagccc cgatattctt tcaaaaacat ggaatgcata ctggatagat
     3841 gtgcccggtt gcaaaccgca tgattacggc gtttatcatt tcagaaaaaa aatttcactg
     3901 cgtgaaaaac cgtcgcaatt tattattcat gtttcagcag ataaccgcta taaattattt
     3961 gtgaatggtc agatggcatc gtttgggccg gcgaagggag atctctacca ctggaacttt
     4021 gaaactgttg atattgcgcc atacttaacc gaaggtgaaa acgttttagc cgccgttgtg
     4081 tggaattttg gcgaagagag agcggagtgg cagatctctt atcaaaccgc ttttatttta
     4141 caaggaaact catcaacaga gtacatcgca aatacagaca caagctggaa gtgtatacag
     4201 aatagtgcgt acagcgcttt acaaccacaa ctcacgtaca cttattacgc tgccggtccg
     4261 ggtgaaaaag tagacatgaa tctgtggcca tcgggttggg aggaatcaga tctcgacgat
     4321 aacacctgga aaaacgcaga aagcatcttt cgaggcgtcc cgaaaatggc tttcgatttc
     4381 agcaccggct ggatgctggt cccgcgttcc atcccaatga tggaaataac gacacaacga
     4441 ttggaaaaga tccgtatgca aaccggaacg aacattggtg aaaatttttt gcagggcgat
     4501 catgcggtta ccattccggc gcatgcaaca gtgcacatct tgttcgacca gtcgtttctt
     4561 acaactgcat tccccgtact gaagtttggc aaaggaaaaa aagcggatgt atcgctgaca
     4621 tatgccgaag cattgttcat aaatgaaggc gacagcaaaa attggcgcgc tcaaaatcaa
     4681 aaagggaaca ggaatgaagt ggaaggaaag cgtatggttg gtttgaaaga tgaagttatt
     4741 tcaaatggca aagagcatca gtcgttcacc gcgcttgcat ggcgctgcta ccgttatgtc
     4801 gctttggata ttactacgca cgacgaacct cttttggtgc aagacatcta cggtttatat
     4861 accggctatc catttacaat gaacgcaagg tttgaaagcg gtaatgatac cttacataaa
     4921 attttggaaa cgggatggcg tactgcgcga cttgatgcac acgagacgta tacggattgt
     4981 ccgttttacg agcaactcca atacgtgggc gacacacgca tacaggctat ggtttccctg
     5041 tacaattccg gggatgacag gctgatgcga aatgcgatag aacagatcgc aaactctatg
     5101 ctcgctgagg gcatcacaga aagccgcttc ccaacgcgca gccaccagga gatcccaaca
     5161 ttctccctga tatggataag catgttacat gattattgga tgtatagagg agatagcaat
     5221 tttataagga accaattgcg catttcccgg caagtgctat cgttctttca caatcttcaa
     5281 acgaaggatg gaagtttgca ccgggttcct tactggatat ttaccgattg ggtggaaaaa
     5341 tgggatggcg gcatcgcgcc aattgataag aatggttatt cgtcgttgct ggacctgcaa
     5401 ttactcatgg cttatgaggc agcggaagat ttggaaagaa atagtgggat gaacatctat
     5461 gccgaaatgt atgactccgc aattgttcaa cttaaaaaaa gtatttatgc aaattattgg
     5521 gacgataaca gaaagttgct tagcgatacc aaggagaaaa aattcttttc gcagcatgct
     5581 aacgcattgg cgattttaac cggagtcata aaccgcgatg atgttcatgt gctcggacaa
     5641 aaattactta gcgatacttc attggcacca gcgtcggttt attttcgata ttatttatac
     5701 caggccctca caaaagcagg atttggcgat caatacctca attggcttgg catctggaaa
     5761 caaaacctcg cgatgggatt gacaacctgg gcagaaatcg atgatatcaa tcgcgccaga
     5821 tctgattgcc acgcctgggg aagcagtccc aacatagaat tatacaggat cgtccttggc
     5881 atcgatacgg atgcgccggg attttcaaaa gtaaaaattg aacctcattt aggagcactc
     5941 acaaaagtat caggcagcat tccacatccc aaaggaaatg tgagtgcgtc atacgaattg
     6001 aaaaatggaa attggagtat aaatatccaa ttgccgcaag aaataaccgg aaaatttttg
     6061 tggaaaggaa gcgaatatga tttgaaagaa ggagagaaca agtttgccct cgagtaattc
     6121 atttccagtc accaattgcc catctcctct tttatgattc gttcaggatc ttttgccctt
     6181 tcgctttccc agttcggatc gtattttaca aaccaactca accatagggt tcgcgaaaaa
     6241 cgcatcaaca agggctgcgt agcaaggagc actacggagt taatggccag ccaataaaag
     6301 acgcggttat catataccga aataccgatc agcaaccacc ataaagcaaa actcaggaca
     6361 gataagaaga ccgtcaggaa ataactcacg tatccggtcc cgtaataaaa accgacttca
     6421 atatccgtcg cctgtccgca caacgggcaa tgatcgtgca tcttcatata ccggcctttc
     6481 cgcaatgcgt atgcgttatg atattcaaaa atgtcacctc ttctgcatcg cgggcagcgg
     6541 ttcgtaataa cgctccacaa gtatgacggt gtgttcgatg acattaatta tttccgatca
     6601 atttgtgtgc aaggtatgca catcgatttt taatttttga aaccattcac cactttttcc
     6661 agttgtatgc ttcgggaccc tttgatgaga aagtagctgt cgtgaaaatt ttgcttccga
     6721 acccattcca aacaggcgtc ggctgtttcg aaatacatgt aagaattatt gattgcttta
     6781 aagtcgccgc cgacaagcac aacagaattc cagcgatatc ggccgatgag ttcaatgatc
     6841 gccctatgtt cctcaacact ccccgcaccc aattccatca tgccgccaag gatcagcact
     6901 ttattctttt catgcattct tgcaaaattt tcaatggccg ctttcatgct cgttggattc
     6961 gcattgtatg catcgaggat cagtttgttg gtgcgtattt caatgagttg agagcggcta
     7021 tttga
//
LOCUS       DASQJI010000127        11170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1085441,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000127 DASQJI010000000
VERSION     DASQJI010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11170
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085441"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VEV83_03775"
     CDS             <1..724
                     /locus_tag="VEV83_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44261.1"
                     /translation="AFILNLAGVYGQDNSKDKQYKNVIRYNISNPLLFGFDRYVVLGY
                     ERVINDNQSISINVGRASLPKLVTINTDSFHLNKDTKNSGYNLSIDYRFYLQKENKYA
                     APHGIYIGPFYSYNHFDRDNSWTLNHENGNNELVTTNTKFDIQTFGFELGYQFVFWKR
                     LTLDLVLVGPGVADYKLKTTIDQDLAADNKQQLQDAIEQLLTQKFPGMNYVFADKEFK
                     ADGTIGTWSVGYRYLIHVGFAF"
     gene            824..1411
                     /locus_tag="VEV83_03780"
     CDS             824..1411
                     /locus_tag="VEV83_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44262.1"
                     /translation="MRILMLASLILFAACGPTTKIEKTWTDPSVSSSTVSPFQKILFV
                     ALVKDASTRKMVEDRLVEQSGGRGVASYNVLQPGDSKENEKEIAERLRQNGFDGAVVM
                     RLANVEKNADNVPGNSYGGWYGYYWLAYPDYNNSGYYSANKVYYIETNIYSVSSNKLL
                     WSGVTSTVNPSRTENMVDDITRVIKKKLKEEGLMK"
     gene            1460..2077
                     /locus_tag="VEV83_03785"
     CDS             1460..2077
                     /locus_tag="VEV83_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44263.1"
                     /translation="MNKLTLLCFLIFGNSMFLSAQDTLTCQFEKLFNIKAGMTKPDVL
                     SYIGDNYKATLVNTEVTKLPAYKGSKGDSIVKEILSYKPDQQTCFNGRNTLFQLEFAD
                     NKLYKAYLSTMYPKSQYQEMITNYNSLRNVIKTDWAYEKEIKISGDKMVGFGYDYTKT
                     KSTNKKTEKVSLMYIDSRSDDPTGNYLLEVLWANLSNTRMQNSNY"
     gene            2247..2507
                     /locus_tag="VEV83_03790"
     CDS             2247..2507
                     /locus_tag="VEV83_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44264.1"
                     /translation="MKQLLISLQEFQSRLSRSFLGVRIFNAQIFNVHLLATAQEHESH
                     CYAEQVRWVSRGVQSNVVAVVVRRGLRVPKILFITSLDFFYF"
     gene            complement(3019..4401)
                     /locus_tag="VEV83_03795"
     CDS             complement(3019..4401)
                     /locus_tag="VEV83_03795"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HYK44265.1"
                     /translation="MKPKQLFNLLLVCLVLFTGCLVGKQYTQPPEPTGISYRENVTTD
                     TSQLITWFDLYQDTALRTMIRTTLDSNRDLMTAAARIEEARFQTAVIKANLYPQFGYS
                     AQAGGGQSGTEAQKTGSGVDGGLFNVFGALSWELDVWGKVRHANRAAVAEYLATVQNR
                     NALEVSLVAETASEYFLLRDLDNRLAIAQQTLTSRQQYTQIITDRFNKGYVPELDKLQ
                     AIQQEAIAAASIPALERQIVQTENSIRLLMGMGPGTVSRGYSNFEQTLSPDIPVGLPS
                     QLLQRRPDIMSAEKSLESQFEQIGVAQANRFPSISLTGILGFAAPELTTFISNKGFVA
                     NGFGSIAGPIFNFNQRKNIVESERKRFEQVYYQYQQTVLLAFGDVDNALTNYRTYTEE
                     LAQRTIEVNAASKSLQLSQARYDNGYTSYLEVIIMQNNLFDAQFQQSEALQGKLNSTV
                     LLYKSLGGGW"
     gene            complement(4379..7552)
                     /locus_tag="VEV83_03800"
     CDS             complement(4379..7552)
                     /locus_tag="VEV83_03800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HYK44266.1"
                     /translation="MSEFFIRRPIFAMVLSILMVILGMIVLRGIPISQYPEITPPMIQ
                     VNASYTGANSVNMEQTVATPIEQQVNGVEKMIYMRSVNANDGTTRLEVSFDVGTNLDN
                     ANMLTQNRVAQASPFLPPEVTALGVTTKKSLTFPLMLVSLSSPHNTYDSKFLNNYGFI
                     NVVDELKRITGVGDVFVFGGSEYAMRVWVKPDLLAKYDLTVQDVINSLKAQNVIKPGG
                     SLGGEPAAAGTQNTYTAILQSRLITEKQFSDIILKSNANGAQVRMSDVARLELGTENY
                     TMSSRINSSAASTIAIYQIPGSNALAVADAIRAKMAELQGRFPPDMKMDFALDTTLAV
                     TAGIDEIMHTLLEAVILVIFVVFIFLQDWRATLIPLLTVPVSLIGTFMVFPLLGFSVN
                     VLSLLGLVLAIGLVVDDAIVVVEAVMHNIEHGMTPTEATRKAMKEVGGPVVAIAVILS
                     AVFVPVAFTGGITGRLYQQFAITIAISVCFSAFNALTLSPALAALLLKPKKDQKGWLA
                     RFFAAFNRKFDQFTNGYVKVAGFFARKLIISLIILGGIVALTVGLGMKIPTGFVPEED
                     QGYFIISTLLPDAASLERTDGVTKKIEGILKSIPEIDLYTTINGNNLLNNTVAPNAAT
                     FFITLKPWEERHKTALDVVAEVNALCMKNISEATVIAVGPPPILGLGNGAGFTMMLQD
                     RAGNSPQYLAQQAQRFVAEASKRPEIGKVYTLYRANVPQKSIQIDKEKVDKLGLNLDN
                     VNSTISTMLGGSFVNNFNQFGRQYKTYVMADADYRMRPEDLQQFYVRNATGDMVPVGT
                     VSQVSDTSGPQYTNHFNIYRAAEINGVAAQGYSSSQASAALKEVAAKVLPANMSYQWS
                     NMSYQEEAAAGTGGKAFLMALLFVFLILAAQYESWKLPFSVLMGTPWAVMGAFLGLAI
                     AGIFSLSYVNNIFSQIGLVMLIGLNAKNAILIIEFAKMKRDAGEDTLPAAIDGAKLRF
                     RPILMTSFAFILGVVPLLTASGAGAEGRKVMGMAVFAGMLTATIIGVLLIPAFYVLIE
                     GKKKKAAAKEIDLVKTIPVKDETKTTI"
     gene            complement(7599..8723)
                     /locus_tag="VEV83_03805"
     CDS             complement(7599..8723)
                     /locus_tag="VEV83_03805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYK44267.1"
                     /translation="MKFITAASFLACVLLVSCKEKVEKTETVPEVSVVEAGQKTIPVY
                     SEYVGQTYGQSDVEIRPRVEGWVKSINFKEGSAVQKGQLLYVIQDDELRDREQAAQAQ
                     LAQANIMLVKAKSDLDRVKPLVEMNALARRDLDAAQASYDAQQQAVYSAKASLNNART
                     QLSYSRILAPITGTIGVSNVQVGDYVKNLGQPAINTISAVGAMRVRFSITENDYIRFS
                     QRMNKENLKNLDVQFILNDGSVFPETGRLDFANREIDPQTGSLLVQAVVENRSRLLRP
                     GQYLKVRLKTDEIQNAVLVPQQAINQMQSVYMAFVVNDSSKINPRPVKTGVRVGSNWV
                     ITEGIKPGEKVALVGNALIKPGIVIKPVLNPYSYDSTSVE"
     gene            9007..9786
                     /locus_tag="VEV83_03810"
     CDS             9007..9786
                     /locus_tag="VEV83_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44268.1"
                     /translation="MDSSFIHNTDASLLCIFLFIAMIGLVALGRFAKKIWRKDESEPS
                     GGVNALLTSVFALFGFILAFTFGMSGNRYDNVRMVVLEEANDIGTAVLRADLYSDSVR
                     DAFRSDFKRYLEARIAYYNPGDTASWLQSKKDAASAATALWARAIQQSKEPNMLIPST
                     NMIPALNAMFDIGTTSDVTLQTRVPDLIVYMLFVLALASSFIAGFTSRVVRARDWIIV
                     TGFALLSSMIIYITLDLARPLRGIIKADMGKQAIVDLRSMF"
     gene            10146..>11170
                     /locus_tag="VEV83_03815"
     CDS             10146..>11170
                     /locus_tag="VEV83_03815"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HYK44269.1"
                     /translation="MTKFLRTCIIVASCLLPALAFAQTEKQESDTGYNAIIPIQKQNL
                     LKNIDVIANMQYGLRNEFTDGEYTGSRFRMDQFRFEIKGQVTDKVYFRLRQRYTSELQ
                     PQSVDKITRATDIAMIRLDVSPKVSISAGKLCADWGGIEFDLNPIDIYEYADILEQAD
                     NFLSGVGASYRPNKSNEFTFQVLNSRTKSFEELYGHPPGVEEAKAPLAIVGNWRGTLF
                     GGKLKTIWSYSIFTEAANTHMNYIALGNQLTLNKFALAYDFQISDEGLDRTGIVSATI
                     PDSLYAYAVKKTLYTSHWIKADYRISKKVNLSFVGFVDFANWKDNLDPEKTSNDVRTA
                     YGYIPTV"
BASE COUNT         3047 a         2549 c         2444 g         3130 t
ORIGIN      
        1 cgcctttatc ctgaatcttg ccggtgtgta cgggcaggat aacagtaagg acaaacaata
       61 caaaaatgtt attcgataca atatctcaaa cccgttatta tttgggtttg accggtatgt
      121 ggtgcttgga tacgaacgcg ttattaatga caaccaaagt atttcaataa atgttggccg
      181 cgcgtcactt ccaaagctcg tcacaatcaa taccgacagt tttcatctga ataaagacac
      241 caaaaactcc ggatataatc tgtcgatcga ctatcgtttc tatcttcaaa aagaaaataa
      301 gtatgcagct ccgcacggca tttatattgg gccgttttat tcctataatc atttcgaccg
      361 ggataatagc tggacgctga accatgaaaa cgggaacaat gaacttgtaa cgacgaatac
      421 aaagtttgac attcaaacat ttggattcga attagggtac cagtttgttt tctggaagcg
      481 gctaacgctc gaccttgttt tagttggacc cggcgttgca gattataaac tgaaaacgac
      541 gatcgatcaa gaccttgccg cagacaacaa acaacaactg caggacgcca tcgaacaatt
      601 gctaactcaa aaatttcccg gcatgaatta cgtatttgcc gacaaagagt tcaaagctga
      661 tggtaccata ggcacatgga gcgtcggata ccgctatctg atacatgtcg gttttgcatt
      721 ttagtgaaca gcgcgcacaa atctgagaaa gtttgcgcat tgctgagctt ttaaaaaacc
      781 aattccataa catcttaata ctttctaaat aaacccggat cagatgcgga tacttatgct
      841 ggcgagttta atcctatttg ctgcatgcgg tcccacaacc aaaattgaaa aaacgtggac
      901 cgatccctcg gtcagttcct cgacggtatc gccatttcaa aaaatattat ttgttgcttt
      961 ggtaaaagat gcatcaacgc gcaaaatggt cgaagatcgc ttagtggaac aatcgggtgg
     1021 aaggggagtc gcttcctata atgttttgca accgggcgat tccaaagaaa atgaaaaaga
     1081 aattgcggaa agactaaggc aaaacggatt tgatggtgcg gtggtaatgc gtcttgcaaa
     1141 cgttgaaaaa aatgctgaca atgtaccggg caatagttat ggcggatggt atggttacta
     1201 ctggcttgca tatcccgact ataataacag cggctactat tcggccaata aggtttatta
     1261 tatagaaaca aatatttact cggtgtcttc gaataaattg ctgtggtctg gcgttacttc
     1321 aacggtcaat ccttcaagaa cagaaaatat ggtggacgac ataacgcgtg tcatcaaaaa
     1381 gaaattgaaa gaagaaggat tgatgaaata attttgcgac gcaatgcatg atctgaaatc
     1441 atatcaaaaa acaaagaaca tgaataaatt gactttactc tgctttttga tcttcggcaa
     1501 tagtatgttc ctcagcgcgc aggatactct cacgtgtcaa ttcgaaaaac tctttaatat
     1561 caaagcgggc atgacgaaac cagacgttct gtcgtacata ggtgataatt ataaagcaac
     1621 gctggtaaac acggaggtta ccaaactacc tgcatataaa ggcagcaagg gtgactctat
     1681 tgtaaaagag atcctttcgt acaaacctga tcagcaaact tgctttaatg ggcgcaacac
     1741 attgtttcaa cttgagtttg ccgacaataa attatacaag gcttatttga gcaccatgta
     1801 tccgaaaagc caataccagg agatgatcac gaattacaat tctctgcgga atgtgattaa
     1861 gacagattgg gcgtacgaaa aagaaataaa aatatccggc gataaaatgg ttggattcgg
     1921 atacgactat acgaaaacca aatcaacaaa taagaagaca gaaaaagttt cgttgatgta
     1981 catcgactcc aggtctgatg atccaaccgg caattacctg cttgaagtac tgtgggctaa
     2041 tctttccaac accagaatgc aaaattcaaa ttattagcag cgaacgtatt gtgctattaa
     2101 agttgagtca gatgatcgcg atccttgcag taaaataatg tccaaatttc atgaacggga
     2161 tggcacgtct ttcccgcgaa ggcgggaacc tgctgacttt agttcatgca atatggaggg
     2221 acagtgatat cttaaaaatg tacatcatga agcaacttct gatctcttta caagaattcc
     2281 agagcagatt gagcaggtct ttcctgggag ttcgaatttt caatgctcaa attttcaatg
     2341 ttcatttact ggcgacagca caggaacacg aatcgcactg ttatgcggaa caagtgcggt
     2401 gggttagtcg gggtgtgcag tcaaacgttg tggccgttgt ggtccgtcgt ggccttcgtg
     2461 ttccaaaaat cttgttcatc accagcctgg atttttttta tttctaactg atagaacttt
     2521 ccgaacagct taaaatcggg tgcttgcctt gagcaggtct ctcttggtag ttccaatttt
     2581 caatgctcaa ttgcgcatgt aagtacccgg atttagccga aattattttt cagtgtgaag
     2641 cttgttgatc gaatcaaaaa attattttta ttgggctaaa gcccgtacaa actttctgcc
     2701 tgttaccccg acctgaagct cggggcaata gacacgcata tcatccagaa acaatgacct
     2761 gccagtctga tcctgatcat ttcacaatct gatcatttca caatgcaatt ttcggacatg
     2821 tgagaaaaac aaaaaacccg atttgcatcg ggttgttata tttcttatag tatatggatt
     2881 tgatgagtgt agagcaagat tcagaccaaa ttttcttcat gggtcacaga catgtcattc
     2941 gtcgacgaca gactttgttt tgaacttccc gcgaaatgcc gtcggaccag gaatttaagt
     3001 tgatctcagt gtaaattatc accatccgcc gcccagcgac ttgtacaaaa gcacagttga
     3061 attgagcttg ccctgcaatg cttctgactg ttgaaactgc gcgtcgaata aattgttttg
     3121 cattatgatc acttcaagat atgacgtgta accgttatca tatcgcgctt gcgaaagttg
     3181 caacgatttg gaggcagcgt ttacttcaat ggttcgctgt gcgagttctt ccgtgtaagt
     3241 tcggtagtta gtaagcgcat tgtccacatc gccgaatgcg agcaatactg tttgctggta
     3301 ttgataatag acctgctcaa atctcttgcg ttccgattcc acaatgtttt ttctttgatt
     3361 aaaattgaag atcggtccgg ctatgctgcc gaatccgttc gcgacaaaac ccttgttcga
     3421 aatgaaagtg gtcagttcag gggctgcaaa tccaaggata ccggttaaac tgatgcttgg
     3481 aaaccgattg gcttgagcaa cgccaatttg ttcaaattgc gattcgagag atttttcggc
     3541 ggacatgata tccggccttc tttgcagcaa ttgggacgga agtcctacag gaatatctgg
     3601 ggaaagtgtt tgttcaaaat ttgaatatcc tcttgatact gttccgggcc ccatccccat
     3661 caacagcctg atagaatttt cggtttggac gatctgtctt tctaatgcgg ggattgacgc
     3721 ggccgctata gcctcctgtt ggatcgcttg caacttgtcg agttcaggca cgtaaccttt
     3781 attaaacctg tcggtgatga tctgtgtata ttgttgcctg ctggttaatg tttgttgcgc
     3841 gatagcaaga cgattgtcaa gatctcttag caaaaaatat tctgatgctg tttctgcaac
     3901 gaggcttacc tcaagcgcgt tacggttttg gaccgttgcc aaatactctg caacagcagc
     3961 gcggttagcg tgccttacct ttccccacac atcaagctcc caactcagcg caccaaaaac
     4021 attaaacagc ccaccatcaa ccccacttcc ggttttctgt gcttcggtac cggactggcc
     4081 tccgcctgcc tgggccgaat atccaaactg tggatacaga ttcgctttta tgaccgccgt
     4141 ttgaaatctc gcctcttcta ttcttgctgc tgcagtcatc aggtcccggt tgctatccaa
     4201 tgtagttctt atcatcgtcc gcaatgctgt atcctggtaa agatcaaacc acgtgattag
     4261 ctgagatgtg tcagtcgtga cattttccct gtacgagatt cctgttggtt ccggcggttg
     4321 cgtatattgt ttaccgacca aacaacctgt aaacagaacc aggcaaacaa gaagtagatt
     4381 aaatagttgt tttggtttca tcctttacag gtattgtttt tactaaatca atttccttcg
     4441 ctgcggcttt ctttttcttt ccttcaatca aaacatagaa tgccgggatc aacaacacac
     4501 cgatgatagt tgcagtgagc atgccggcaa acacggccat tcccatcacc tttcttcctt
     4561 cagcgccggc gccacttgcc gtaagcagcg gcaccacacc gagaatgaat gcgaacgaag
     4621 tcatcaatat cgggcggaag cgaagtttcg caccgtcgat ggcagcagga agtgtgtctt
     4681 caccggcatc ccgtttcatt tttgcaaact caatgatcag gatcgcattt ttcgcattca
     4741 atccaatcag catcaccagc ccgatttgag aaaatatatt gttcacataa ctaagagaga
     4801 aaattccggc tatagccaat cctaaaaatg cacccattac cgcccatggt gttcccatta
     4861 gcacactgaa aggaagtttc cagctttcat attgtgctgc aaggatcagg aatacaaaaa
     4921 ggagcgccat caaaaatgct tttcctccgg ttcccgctgc agcttcttcc tggtacgaca
     4981 tgttactcca ttggtagctc atgtttgccg gcagaacttt cgctgcaact tctttcaacg
     5041 ccgctgatgc ttgcgaagaa ctgtaacctt gcgccgcaac tccattgatc tctgctgccc
     5101 gataaatgtt gaagtgattt gtatactgtg gcccgctggt gtccgacact tgtgatacag
     5161 tgcccaccgg aaccatgtca cccgtggcat ttcgaacata gaattgctga aggtcctccg
     5221 gtcgcatgcg gtaatcagca tccgccatta cataagtttt gtattgcctg ccaaactggt
     5281 tgaagttatt tacaaatgat ccgccgagca tggtcgagat cgtgctgttt acattgtcaa
     5341 gatttaaacc aagcttatct accttttctt tatctatctg gatacttttc tgcggaacgt
     5401 tggcgcgata tagtgtataa acttttccaa tttcggggcg tttgctggct tctgctacaa
     5461 agcgctgagc ctgttgtgcg aggtattgcg gagaattgcc cgcgcggtcc tgcagcatca
     5521 tcgtaaagcc ggcgccattt cccaatccaa ggatcggggg cggacctact gctatcaccg
     5581 tagcttctga aatatttttc atgcaaagtg catttacctc tgcaactaca tcaagcgctg
     5641 tcttatgacg ttcctcccat ggtttcaacg tgataaagaa agtagccgca ttaggcgcta
     5701 ctgtattgtt taaaagatta tttccattga tagttgtata tagatctatt tccggaatac
     5761 ttttcagaat tccttcaatc ttttttgtta cgccatcggt acgttcaagt gatgccgcat
     5821 cagggagcag cgtactaatg atgaaatatc cctggtcttc ttccggaaca aatcccgtcg
     5881 gaattttcat cccaagcccc actgttagag caacgatccc gccgaggata atgagagaaa
     5941 tgataagttt ccgcgcaaag aagccggcca cctttacata gccattcgtg aactggtcga
     6001 acttgcggtt gaatgcagca aagaaccttg caagccatcc tttctgatct ttctttggtt
     6061 ttaacaacaa agctgcgagc gccgggctca atgtaagcgc attgaacgcc gagaaacaca
     6121 ccgagatggc aatggtgata gcaaactgct gatacaatct tccggtaatt cctccagtga
     6181 atgcgacggg aacaaacacg gcggaaagaa taacagcgat cgcaaccaca ggtccgccaa
     6241 cttctttcat agctttcctt gttgcttctg tgggcgtcat cccatgttca atgttatgca
     6301 tcaccgcttc caccaccaca atggcgtcat cgaccactaa gccgatggcg agcactaatc
     6361 caagaagaga aagaacattt actgaaaacc cgagaagggg aaagaccatg aaagttccga
     6421 tgagggaaac aggaaccgta agcaatggga tcaacgtggc tctccagtcc tgcaggaaaa
     6481 taaacaccac gaaaattacc aggataaccg cttcaagaag cgtgtgcata atttcatcaa
     6541 ttcctgctgt tacagcgagt gtggtgtcca gcgcgaaatc cattttcatg tcaggtggaa
     6601 atctcccctg caattccgcc atcttcgctc ttattgcatc ggcaacagcg agcgcatttg
     6661 agcccgggat ctggtagatc gcaatcgtgg aagctgctga gctattgatc cggctgctca
     6721 tggtgtagtt ttccgttccc agttcaagtc gggctacgtc actcatgcga acttgcgcgc
     6781 catttgcatt tgatttaaga atgatatcgc tgaattgctt ttcggtgatc aaccgcgact
     6841 gaagaattgc agtgtaagta ttttgagttc cggcagcagc aggttctccg cccaaacttc
     6901 cgccgggttt aataacgttt tgcgctttta gcgagttgat cacatcctgg actgtgagat
     6961 catattttgc aagcaggtcg ggctttaccc acacgcgcat cgcatattct gatccaccaa
     7021 atacgaacac atcacctacg ccggtgatac gctttagttc atccacgacg tttatgaatc
     7081 cataattgtt cagaaatttt gagtcgtaag tattatgggg agatgaaagg gagacaagca
     7141 tcagcggaaa tgtcagcgac ttctttgtcg ttaccccgag cgccgtcact tccggaggaa
     7201 gaaacgggct tgcttgcgca acgcgatttt gtgttagcat gttcgcattg tcgaggtttg
     7261 ttcctacatc gaatgaaact tcaagccgtg tagttccgtc attcgcattc accgaacgca
     7321 tgtagatcat cttttccaca ccattcacct gttgctcgat cggcgtggca acggtttgct
     7381 ccatattcac agaatttgca ccggtataag atgcatttac ctgtatcatg ggcggagtga
     7441 tctcaggata ttgcgagata gggatgccac gcaatacgat catcccgagt atgaccatca
     7501 ggatggacag aaccattgcg aagatggggc ggcgtatgaa gaattcactc atgaataagt
     7561 ttgaagggat ttaataattt tctttttgca ggcagtggtt attcaactga tgtggaatcg
     7621 taagaatacg gattcaaaac gggcttgata acaattccgg gcttgataag tgcattgcct
     7681 accaatgcaa ctttttctcc cggctttatt ccctcagtga tcacccagtt gctccccaca
     7741 cgaacccccg tttttaccgg acgtgggttg atcttgctgc tgtcgtttac cacaaatgcc
     7801 atatacacgc tttgcatttg gttgatcgcc tgttgcggca caagaacagc gttttgtatt
     7861 tcgtcggttt tgaggcgaac tttcagatac tggcctggac gcagtaaacg ggatctgttt
     7921 tctacaacgg cttgtaccag caaagaacct gtttgcggat ctatttcgcg attagcgaaa
     7981 tcgagtctac cggtttcagg aaacacagaa ccatcattca aaataaattg cacatcgagg
     8041 ttctttagat tttccttgtt cattcgctgg ctgaacctga tataatcatt ttcagtgata
     8101 gaaaagcgca cacgcatcgc gccaaccgct gatatcgtat tgatcgcggg ctgaccaaga
     8161 ttttttacgt aatcgccgac ctgcacgttc gatacaccga tggtaccagt tatcggcgca
     8221 agaattcttg aataactcag ttgcgttcgg gcattgttta acgacgcctt cgccgaataa
     8281 actgcctgct gttgcgcatc gtagcttgct tgtgcagcat cgagatcgcg tcttgcgagc
     8341 gcattcattt ccacgagcgg tttaacgcgg tcgagatcag actttgcttt cacaagcatg
     8401 atattcgcct gcgcaagttg tgcctgtgca gcctgttcac ggtcgcgcaa ttcgtcgtcc
     8461 tggatcacat acagcagctg tcctttttgc accgcgcttc cttctttgaa atttatgctc
     8521 tttacccagc cctccacacg cggccttatc tcgacgtcag attgcccata ggtttggcca
     8581 acatattccg aatacactgg tatcgttttc tgacctgctt ctacaacgga tacttcaggg
     8641 acagtttcag tcttttcgac cttttcttta cacgacacta aaagcacaca agccaaaaag
     8701 gaagctgcag ttatgaattt catgaagaac agttttatag tattgatttc aaacgaattt
     8761 cccgagtcgc caagacaagc tctgacctca aatttatctc tgaaaatttt attaatcagg
     8821 ttcaccaaca agttaactgt taaatatcaa tcctcagcct tattgcgtgg attaatccgt
     8881 tattttgatt ttctatttcg tttgcgatat aaacggtccg agtcatcgtt aaactgctct
     8941 ttcgattaca cctcaagttg aatgattttt tagaccatca cacgggcgcg atagacctac
     9001 tgcaaaatgg acagttcgtt tatacataat accgatgcct ctcttctttg tatttttctg
     9061 ttcattgcga tgatcggttt ggtggcgctc ggaagatttg cgaaaaagat ttggcgcaaa
     9121 gatgaaagtg aacccagcgg cggcgtaaat gccttgctca catcggtgtt cgcattattt
     9181 ggatttatac ttgcattcac cttcggcatg tcgggcaacc ggtatgacaa tgtgaggatg
     9241 gttgttttag aggaagccaa cgatattggc acagccgttc tccgtgcaga cctttattca
     9301 gacagtgttc gtgatgcgtt tcgctccgat ttcaaaagat atctcgaagc gcgaattgct
     9361 tattacaatc ctggcgatac ggcttcgtgg ctgcagtcaa aaaaggatgc ggcgtctgct
     9421 gcgactgctt tatgggcacg cgctatccag cagtcgaaag agcctaacat gctcattccg
     9481 tcaacgaaca tgattccggc gttgaatgca atgtttgaca ttggcacaac gagtgacgta
     9541 acattacaaa ccagagttcc tgaccttatc gtgtacatgt tgtttgtact cgcactagcc
     9601 agcagtttta ttgctggttt tacaagtcgg gttgttcgcg ccagggattg gatcattgta
     9661 accggcttcg cgctgttgtc atccatgatc atttatatca cactcgatct tgccaggcca
     9721 ctgcgtggta tcatcaaggc ggatatgggc aaacaagcga tcgttgactt acggagcatg
     9781 ttttaagtgc tgccacttga gtgtttggta catctgccca tgcattacga cgctaactta
     9841 tcatcgcacc gcgacaatta ttgttgcatt gttcatctgc atccaacggc cttgcttatc
     9901 acatcgattc gtaaacatcg gatccagcgt ctccgtcacg gcgtggcttt accaggtcgt
     9961 ggtgaaacta acagtgaaca aagctgtgct taatgaaaaa ttaatatagc gccctgtttg
    10021 ttttagttaa ccgttaaatg ccagcgtgtt gaacgagcct gatagtaaga cgctaatttt
    10081 atgcacgaaa aataccatta cagaaattct gttcgtcgaa aaaaaatctt ttaaaacaaa
    10141 cccaaatgac aaaatttctt cgcacttgta tcattgtagc atcatgcctt ttgccagcat
    10201 tagccttcgc gcaaacagaa aagcaggagt ctgacacggg gtacaatgct attataccaa
    10261 ttcaaaaaca aaacctccta aagaatatcg acgttattgc caatatgcaa tatggtttgc
    10321 gcaatgaatt tactgatggc gaatatactg gcagccggtt tcgcatggac caattccggt
    10381 ttgagataaa gggacaggta actgacaaag tgtatttccg tttgcgccaa cgttatacaa
    10441 gcgagttaca accgcaatca gtagacaaga tcaccagggc tactgatatc gcaatgataa
    10501 gactggacgt atcacctaaa gtaagcataa gtgccggtaa gctttgtgca gactggggtg
    10561 gaattgaatt cgatctgaac cctatcgata tttatgagta cgccgatatt cttgaacagg
    10621 cagataattt tttaagtggc gtcggcgcaa gttacaggcc taataagtca aatgaattta
    10681 ctttccaggt gcttaattcg cgtaccaaat catttgaaga attgtatggc catccgcccg
    10741 gtgtggagga ggcaaaggcg ccgctcgcga tcgttggtaa ctggcgaggc actttgttcg
    10801 gcggcaagct taaaacgatt tggtcataca gcattttcac cgaggccgcg aacacgcaca
    10861 tgaactatat cgcactggga aaccagctaa cattgaacaa atttgctctt gcatacgatt
    10921 ttcaaatcag tgatgaaggc cttgacagaa ccgggattgt tagcgcgacc attcctgact
    10981 ctctgtacgc atacgcagtc aaaaaaactt tgtacaccag ccattggata aaagctgatt
    11041 acaggataag caaaaaagtc aacctgtctt ttgttggctt tgttgatttt gccaactgga
    11101 aagacaacct tgatccggag aagacttcta acgacgtaag gaccgcttat gggtacattc
    11161 caacagttga
//
LOCUS       DASQJI010000128         6345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_164487,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000128 DASQJI010000000
VERSION     DASQJI010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6345
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164487"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VEV83_03820"
     CDS             <1..1039
                     /locus_tag="VEV83_03820"
                     /inference="COORDINATES: protein motif:HMM:NF014214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M36 family metallopeptidase"
                     /protein_id="HYK44270.1"
                     /translation="KSFLLNNITTNATLSPTPMIDGDLDNGIPAHEYTHGISNRLTGG
                     PTTVSCLNNGEQMGEGWSDYFSLMMTTNWATAKYTDSVKPRAIGNYALGLDSTYGGIR
                     TYPYCKKFSIDPWTYDSLISDPDIHEYNVLTHPEVIYYTGELWCSTLWDMTWNLIKTE
                     GFNKTFFKPNSAGGNSTAMKLVMQGLKLQKCSPGCLDGRNAILQADTILYGAAHAREI
                     WTAFARRGMGYSAKQGTNSKIKDGQAAHDLPPGLSAPQTDAISKNELNSAPSITVSPN
                     PTKDLLVVNIPGNTEKLNVQLMSNNGALIGKYVLTGETLRLDASKLAAGVYNLLITGE
                     SYTSKFRVVVQ"
     gene            complement(1108..2238)
                     /locus_tag="VEV83_03825"
     CDS             complement(1108..2238)
                     /locus_tag="VEV83_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HYK44271.1"
                     /translation="MGERIYFDNAATTPLDPQVLEAMMPYLTTHFGNPSSIYSYGRET
                     RLAVENARKTVAKILGANPGEIFFTSGGTESSNMAICAAVHDLCCVRIITSPIEHHAT
                     LHTVEHLHKTGKVALDYVNVLPNGHIDLSHLEELLSPSMGKTLVTLMHANNEIGNIID
                     IQAVGNLCKKYGAIFHSDTVQTVGHFPFNLHATPVDFINGSAHKFHGPKGVGVIYVSE
                     KIKIQPFVHGGSQERNMRAGTENIYGIVGFAKALEIATANYDREREHISGLKKYMMTE
                     LSQHINGVSFNGDPDGCSLYTVLSVNFPKTEKSELILFNLDINNICASGGSACTSGAN
                     MSSHVIGAISPNSDLVTVRFSFSKNNTRDEVDRVVSQLKEII"
     gene            2300..3682
                     /locus_tag="VEV83_03830"
     CDS             2300..3682
                     /locus_tag="VEV83_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HYK44272.1"
                     /translation="MRKTIVSMWLNNILETIGHTPLIRLNKITKDLPCTVLAKVDYFN
                     PGNSIKDRMALKMVEVAEQEGKLKPGGTIIECTSGNTGMGLALAACVKGYKCIFTTTD
                     KQSKEKMDILKAVGAEVIVCPTNVEPDDPRSYYSVARRLEKEIPNSYLCNQYDNLANR
                     LAHYETTGPEIWEQTEGKITHVVCTAGTGGTVTGLGMYLKEKNPNIQIWAIDVYGSLL
                     TKYFRTGEVDMNEVHPYISEGFGEDFVPKNYDMSVIDHFEQVTDKDGAIMARRIAKEE
                     GIFIGYSAGSCVQGLMQLKDRLKKDDLVVCIFHDHGSRYVAKIYNDQWMMERGFLDVK
                     TFKDIVNGRVGKKLITITASQTVAEAVELMKKYDIENIPVMNGHGNGPIGAVSETGLF
                     QKVFDNPELKEARVESIMEQPYPVVEFETPVERLGSLINKGNGAVLAKDEKGDYHIVT
                     KYDVIQSLAK"
     gene            3707..4234
                     /locus_tag="VEV83_03835"
     CDS             3707..4234
                     /locus_tag="VEV83_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HYK44273.1"
                     /translation="MSDDLRYPRGKYLPQLFSHKQKEEWLLDIKFLPSELELSVQNLD
                     AYQLETPYREGGWTVQQLVHHVADSHINAYVRFKLGLTEEEPTIRPYEQDAWVELNDV
                     KSLPVNISLTLLHALHQRWYAMIEPLAEEQWERTVFHPEHKKLISLWELLGMYAWHGK
                     HHVAHIVSLRERKGW"
     gene            4423..4980
                     /locus_tag="VEV83_03840"
     CDS             4423..4980
                     /locus_tag="VEV83_03840"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HYK44274.1"
                     /translation="MSEHLKWETLSSEYLAHETWFTVRRDTCKRGDGKIVNNYYVFEF
                     PEWATAFAVTEEGKILMTRQYRHAINEVCIELPGGCVDATDKSYEDAIRRELLEETGY
                     EFTDVVPLGKISANPSTNSNLMHMFLATGGKKVKEQSLDDNEEIEIIELSFDELKQLI
                     DENKILQAMHMSTIWYALRKLGRTI"
     gene            complement(5192..>6345)
                     /locus_tag="VEV83_03845"
     CDS             complement(5192..>6345)
                     /locus_tag="VEV83_03845"
                     /inference="COORDINATES: protein motif:HMM:NF033543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HYK44275.1"
                     /translation="MVGRDGVFTPLLKHLIEASLEGELDAHLQDTRKLQKNRRNGHGR
                     KNLLSPLGGFEIFSPRDRNATFEPKIIEKRQHKITSDIDAQILALYGRGMSYSDIQSH
                     LSEMYGIDVSEGTISSITDRIIPAIKEWQNRPLENVYPVIWLDAMHFKVRENGVVKTK
                     AIYSILGVTVDGQKEVIGIYFGDHESSSFWRQVLYELNQRGVQDVFVACIDNLKGFAE
                     AIEDVFPQTDVQLCLVHQMRNSIKYMSEKDIKPMVRDLKKVYKAINTDMAQHYLEQAE
                     KVWEPKYTAVFKSWHKNWDRLTNFFKYPPALRRLIYTTNPIESYHRMVRKVTKTKGAY
                     TSEDAIVKQIYLATMNAQTKWTGTIFAWASIRREMNDYFKTRFNNSDTL"
BASE COUNT         1837 a         1349 c         1459 g         1700 t
ORIGIN      
        1 aaaaagcttt ttgttgaaca atataactac gaatgctaca ttgtctccaa cgccgatgat
       61 cgacggagat cttgataatg gcattcctgc acatgagtac acgcacggaa tttctaaccg
      121 cctcaccggc gggcccacta cagtttcatg cctgaacaac ggcgagcaaa tgggcgaagg
      181 ctggagcgat tatttttcac tcatgatgac caccaactgg gcgacggcga agtacacgga
      241 tagtgtaaag ccaagggcga tcggtaacta tgccctcgga cttgacagca cttacggagg
      301 aatcaggaca tacccgtatt gcaagaaatt ttctatcgac ccatggacgt acgacagcct
      361 tatttccgac cccgacattc atgaatacaa tgtgcttacg catccggaag tgatctatta
      421 caccggtgaa ctctggtgca gtactttatg ggatatgaca tggaacctta ttaaaaccga
      481 gggcttcaat aaaactttct tcaaacctaa ctctgccggc gggaactcaa ctgccatgaa
      541 actggtgatg cagggattga agttgcaaaa atgtagcccg ggttgcctgg atggaaggaa
      601 cgcgatactg caggcagaca caattctcta cggtgccgct catgcacgcg aaatttggac
      661 tgccttcgcg cgccgcggta tgggttatag cgcaaagcag ggtaccaatt caaaaatcaa
      721 ggatgggcag gcggctcacg atcttcctcc gggattatca gcgccgcaaa ctgacgcgat
      781 ttctaaaaat gaacttaaca gcgcgccttc gatcacggtg tcgccaaatc caacaaagga
      841 tctcctcgtt gtgaacatac ctggcaacac cgagaagcta aatgttcaat tgatgagcaa
      901 caacggtgct ttgatcggca agtatgtgtt aacaggtgag acgctgcgac tggatgcttc
      961 aaaacttgcg gccggcgttt ataatcttct gataacagga gaaagctaca cctcaaaatt
     1021 cagagttgtg gtacaataat cgttctataa tgcactttat ttaatgcaaa accggggtga
     1081 atgccccggt tttcattttt atcaagatca aattatttct tttagttggc tcaccacgcg
     1141 gtcgacttcg tcccttgtat tgttcttgct gaaagagaaa cgaacagtaa caagatcaga
     1201 gtttgggctg atggcgccga tcacgtggct tgacatgttc gctccactcg tgcatgcgct
     1261 gccaccggat gcgcagatgt tatttatgtc gagattgaaa agaattagct cgctcttttc
     1321 cgtctttgga aaattcacgc ttaatacagt gtacaaacta caaccatccg ggtcgccgtt
     1381 aaaacttacg ccgtttatat gttgcgacaa ctccgtcatc atgtattttt tcaaaccgga
     1441 aatatgttcc cgctcgcggt cataattcgc tgttgcaatt tctagagctt ttgcaaaacc
     1501 gacaatgccg tagatgtttt ctgtgcctgc ccgcatatta cgttcctggc tgcccccgtg
     1561 cacaaagggt tggattttta ttttttcgct cacataaatg acaccaacac cttttggccc
     1621 atgaaactta tgtgccgagc catttataaa atccactggc gttgcatgaa ggttgaacgg
     1681 aaaatggcca actgtttgca ccgtatcgct gtgaaaaatc gcgccgtatt tcttgcacaa
     1741 gtttccaaca gcctgaatgt cgatgatgtt tccgatctcg ttatttgcat gcattagcgt
     1801 gaccaatgtc ttgcccatcg agggcgacag caattcttct agatgcgaaa gatcaatatg
     1861 cccgttcggc aaaacattca cgtaatcgag ggcaactttg ccggttttat gcaaatgctc
     1921 aaccgtgtgc agcgttgcat gatgttctat cggcgatgta atgatgcgca cacaacacag
     1981 gtcatgcacc gcagcgcaaa ttgccatatt gctgctctcg gttcccccac ttgtaaaaaa
     2041 aatttcaccc gggtttgcac ccaatatttt cgcaaccgtt tttcgggcgt tttcaacagc
     2101 aagccgtgtc tcccttccat agctatagat agatgaagga ttaccgaaat gtgtggttaa
     2161 atagggcatc atcgcttcca gcacctgcgg atcaagcggc gtggttgctg cattgtcaaa
     2221 gtaaattcgc tctcccatac atgtaaaata ccgtcttgca aagctgcgaa gttaaaagct
     2281 aaggggtgaa aatgtacctt tgcgcaaaac aattgtgagt atgtggctga acaatattct
     2341 tgagacaatt ggacatacgc cattgatcag gcttaataaa atcacaaagg atcttccgtg
     2401 cacagtgctt gcaaaagtgg attatttcaa tccgggtaac tctatcaaag accgtatggc
     2461 tttgaagatg gtggaagtgg cagaacagga aggaaaatta aagcccggtg gcaccattat
     2521 cgaatgcact tcaggaaaca cgggtatggg cctcgctctc gctgcatgcg ttaaaggtta
     2581 caaatgcatt ttcactacca cagataaaca gagcaaagaa aaaatggaca ttctgaaagc
     2641 cgttggtgct gaagtgatcg tttgtcccac gaatgtagaa cctgatgacc cgcgcagtta
     2701 ctactctgtg gcgcgcaggc tcgaaaaaga aattccgaac tcttacttat gtaatcaata
     2761 tgataatctc gcgaacaggt tagcacatta tgaaaccact ggccccgaga tatgggaaca
     2821 aacggaagga aagatcactc atgttgtctg caccgctggg accgggggca cggtgaccgg
     2881 cctcggtatg tatctaaaag aaaagaatcc gaacatacag atctgggcga tcgatgtata
     2941 tggctcactc ctgaccaagt attttcgaac cggagaagtg gacatgaatg aagtgcaccc
     3001 ctatatcagt gaagggttcg gagaagactt tgttccgaag aattacgata tgagcgtgat
     3061 cgatcatttc gaacaggtga ccgataagga cggagccata atggcgcggc gtattgcaaa
     3121 agaagaaggc atatttattg gctacagcgc aggcagttgt gtacaaggtt taatgcaatt
     3181 aaaggacagg ttgaaaaaag acgacctggt agtttgtatt tttcatgatc atggaagcag
     3241 gtatgtagct aaaatctata acgatcagtg gatgatggaa aggggatttc ttgatgtgaa
     3301 aacattcaag gacatcgtga acggaagagt cggcaaaaaa ttgatcacga tcactgcatc
     3361 gcaaacagtt gccgaagccg ttgaactcat gaagaaatat gatattgaaa atatacccgt
     3421 aatgaacggg cacggtaacg gaccgatagg ggcggtcagt gaaactggct tatttcaaaa
     3481 agtttttgat aatcccgaat tgaaggaagc gcgcgttgaa agcattatgg aacagcctta
     3541 tcctgtcgtt gagtttgaga cacctgtgga acgcctggga agtttgatca ataaaggaaa
     3601 cggtgcggtg ctcgcaaaag acgagaaagg cgattatcac atcgtcacga aatatgacgt
     3661 tattcaaagc ctcgctaaat aaattcaaat actatctgct ttttctatga gtgatgatct
     3721 acgttacccc cggggtaaat atttaccgca actgttttcg cacaaacaaa aagaggaatg
     3781 gttacttgat ataaaattcc tgccatctga attagagctg tcggtgcaaa atctcgacgc
     3841 gtaccagtta gaaacgccat accgcgaagg tgggtggacg gtgcagcaac tggtgcatca
     3901 tgttgcagac agtcatatca atgcatacgt tcgttttaag ctgggtttga ccgaagaaga
     3961 gccaacgatc aggccgtacg aacaagatgc atgggtggaa ttgaacgacg tcaaaagttt
     4021 gccggtcaat atttcgctaa cacttttaca cgcacttcat cagcgctggt acgcgatgat
     4081 tgaacccctc gccgaagaac agtgggaaag aactgtattt catcctgaac ataaaaaact
     4141 gataagtttg tgggaattgc tgggtatgta cgcatggcat ggcaagcacc atgttgcgca
     4201 tatcgtcagt ttgcgtgagc gaaaaggatg gtgagggaat gagtaatgag tgatcagtaa
     4261 tgagtggcta ataacggtca gccactgaca attgataact gacagttgat agatgacgtt
     4321 gacagttgag ttcgagggat gacgagttca ctattcacca ttgaccattc actattcaca
     4381 agccttccta ttactcatta ttcattattc atcattcatc acatgagcga gcacttaaaa
     4441 tgggaaacac tttcttctga atatctcgcc cacgagacct ggttcaccgt tcgcagggac
     4501 acctgtaaac gcggcgatgg taagatcgta aataattatt acgtttttga atttcccgag
     4561 tgggcaaccg cattcgctgt aactgaagag ggaaaaatat taatgacacg acaatatcgt
     4621 cacgcgataa atgaagtttg tattgaattg ccgggtggct gtgttgatgc gactgacaag
     4681 tcttatgaag atgcaatacg gagagaacta cttgaagaaa ctggttatga gtttactgac
     4741 gtagtgccgt tgggcaaaat ttcagctaac ccttcgacca actcaaacct catgcacatg
     4801 ttccttgcga cgggaggcaa aaaagtgaag gagcaatcgc tcgatgataa cgaggagatc
     4861 gagatcatcg agctcagctt tgatgaattg aaacagctca tcgatgaaaa taagatcctg
     4921 caggcaatgc acatgagtac catctggtat gcgttgagaa agttaggaag gacgatttga
     4981 attgggaatt aggaattagg atgtaggaat taggatgtag gagttaggaa ttaggaatta
     5041 ggaattagga attaggaatt aggaattagg agaaggattt accaattggg atttgaacga
     5101 accagggatt gcagatcata catcagagat ctaggaatta ggaattaaga attaagaatt
     5161 aggaattagg ctttgaacga ggtagtgttc attaaagtgt gtcagagtta ttaaatcggg
     5221 ttttaaaata gtcattcatt tctctgcgta ttgaagccca ggcaaatatt gttccggtcc
     5281 acttggtttg agcgttcatg gttgccagat aaatctgttt tacgattgcg tcttcagaag
     5341 tataggctcc ttttgttttt gtcactttcc taaccattct atgatagctt tcaatcggat
     5401 tggttgtata aattaatctc ctaagcgcag gtggatattt gaaaaagttg gttagcctat
     5461 cccagttctt atgccagctc ttaaataccg ctgtatattt tggttcccag actttttccg
     5521 cttgttcaag gtagtgctgc gccatgtcgg tattaattgc tttataaact ttcttcagat
     5581 ctcttaccat gggttttatg tctttttctg acatatactt tatcgagttg cgcatttgat
     5641 gaaccagaca aagttgaaca tccgtttgcg gaaaaacatc ttcaatagct tcggcaaaac
     5701 cttttagatt atcaatgcag gcaacaaaaa catcctgtac gccgcgttga tttaactcgt
     5761 ataagacctg tctccaaaaa gaactggact catgatctcc aaaataaata cctataacct
     5821 ctttttgccc atcaacagtg acacccaaaa ttgaataaat agcctttgtt tttaccaccc
     5881 cgttttcacg aactttaaag tgcatagcat ccagccatat cacaggatat acattttcaa
     5941 gcggccgatt ctgccattcc ttaatcgctg gtataatcct gtcggtaatt gagctaatgg
     6001 taccctctga aacatcaatt ccatacattt ctgacaaatg gctttgaata tcgctatagc
     6061 tcattccacg accatacagc gccaggattt gtgcatcaat atcactggta atcttgtgtt
     6121 gacgcttttc aatgatcttg ggctcaaagg tggcgttacg gtcgcgcggg gaaaaaatct
     6181 cgaagccccc taatgggctt aagagatttt ttctgccatg gccattgcga cggttcttct
     6241 gcagcttacg cgtgtcttgc aagtgtgcat ccagttcacc ctctagcgat gcctcaatca
     6301 gatgttttaa aagcggcgta aatacaccgt ctcgaccaac cattg
//
LOCUS       DASQJI010000129         5676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_471826,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000129 DASQJI010000000
VERSION     DASQJI010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5676
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471826"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VEV83_03850"
     CDS             complement(<1..248)
                     /locus_tag="VEV83_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HYK44276.1"
                     /translation="MKVKDGMIDILKSSQLHITENRLKILEVFQKSAHALSHADIEKL
                     TGKHFDRITIYRTLQTFVEKGIVHIIPTSDNSIMYALC"
     gene            complement(248..898)
                     /locus_tag="VEV83_03855"
     CDS             complement(248..898)
                     /locus_tag="VEV83_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYK44277.1"
                     /translation="MRRKVIGYTLFFVVLTVLFLVFVFAGTDKWKSKSPTISFVKPFH
                     FTTEDNKTFTEKDMAGKVCVVNFFFTSCKGICPEMNSNLLTIYKEFLDEPNFMIVSHT
                     CDPETDSATRLKHYADSMKVDTRRWVFLTGRKDSLYMAARNSYLIDDPNNNVADINDQ
                     FLHSQFIALVDKNGNVRGQVYDALKPDELKLLRSNIRNLLTEKSSSSVTMGTSFAN"
     gene            986..1405
                     /locus_tag="VEV83_03860"
     CDS             986..1405
                     /locus_tag="VEV83_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HYK44278.1"
                     /translation="MVKALAKKINLDALGISTSLLCAIHCAVLPLFFTSLPVFGFEIL
                     QNKTFEYSMIALAAIIGISALRHGWKRHHHKSLPLVVFVTGLLFLIVKEIFPSQEFLL
                     LIPAATLIISAHFLNFHFCRQAKHCHTSDCNHEHLLG"
     gene            complement(1430..1900)
                     /locus_tag="VEV83_03865"
     CDS             complement(1430..1900)
                     /locus_tag="VEV83_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HYK44279.1"
                     /translation="MSTKLNLDKLDFQIIQEMMDSANISYAELGKKLFVSAGTIHVRI
                     KKLQDIGIVKGTKMHVDHKVLGYDVIAFIGIYLEKSSLYDSVARELKKIPEIVRLNYT
                     TGNYSMFAEVVCKDIGQLKFVLHDELQKIKGIERTDTIISLEESFSRNVQVINH"
     gene            complement(2278..3198)
                     /locus_tag="VEV83_03870"
     CDS             complement(2278..3198)
                     /locus_tag="VEV83_03870"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HYK44280.1"
                     /translation="MILLYGISEDSPMSMVRDELNKAGANYLFLDHRNIFNYSIEFNC
                     SDDGPDKVIINAPEISFDLADVSSVYTRPYNFMDYPQMQGRSLDDPAAVTAMGFEHQF
                     MLCLDTSGAFVVNRSEASASNNSKPYQLSVIRQVGLKIPETFITNEPRAAAQFIKTNA
                     ECVYKSVSGVRSIVKRVSESHYDYLEDVKWCPTLFQEFVPGDNYRVHVVNDKVFSVRI
                     ESDNLDYRYGKTLMFIEELPSEIAEKCCTLTAALGLHFSGIDLMRTPDNEWYCFEANS
                     SPAYSYFELHSGLKISTALAEMLMNAGKKN"
     gene            complement(3211..3900)
                     /locus_tag="VEV83_03875"
     CDS             complement(3211..3900)
                     /locus_tag="VEV83_03875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44281.1"
                     /translation="MILLISNIANEAAPAWVSSLPAGAVSLITASDFNRSFKAGISVN
                     NFSSSSLTINGYETTPDELTGVIVTIPAFSPIEFYYINQEDREYVCSEVNAFMNYFLT
                     ALKCKKINPPTRRSLGGLWFQKFEWLKIARKLNIPIVPFIMKNGKYEYAVQKDLLQTF
                     SCTIINDEIMENENEHVHGYVKLLAKEFSLPYLSCYFSTADSKNFQLLDINAIPDITI
                     ASYRDAMLKYL"
     gene            complement(3908..4873)
                     /locus_tag="VEV83_03880"
     CDS             complement(3908..4873)
                     /locus_tag="VEV83_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44282.1"
                     /translation="MPQATIRCFQYVVGAGRSRQPRSPMPGVYPPGLGPIVCYSQQPP
                     NTYVTGTPFTAPFPFPPAGLPCIPDYRFAFQSVTGLVEGGQISTNIMAPCSGTVGTSP
                     ILVTNVYIPPGGTGPGGESGAIIDAFNAETGQFCDDTFVTVSPDSGGNLTSSGNVYGW
                     VSSQGGDETITAYTHIMPSDMYFHDWQIVEGTGTSADNVSGAALTVGAGTNPYAFAFY
                     GRQQKSFYKDIKDLMKEWLADKPVTIDSPRKDLASELPKWKDAAGEGDPWKNIGGPVE
                     QTIQGLVDKVSNLEQQIKEMGQSFIRIQERPVVGKEIAAQGFKPQ"
BASE COUNT         1553 a         1245 c         1193 g         1685 t
ORIGIN      
        1 ttacagagcg catacatgat cgaattatct gacgtgggaa taatatgaac gatgcctttt
       61 tcgacaaatg tttggagggt gcggtaaatc gtgatcctgt caaaatgctt tcctgttagt
      121 ttttctatgt cagcatgcga aagtgcatgt gcacttttct gaaaaacctc aaggatcttc
      181 aaacggtttt cagtgatgtg aagctggctg cttttcaata tgtcgatcat cccgtctttc
      241 actttcatca gtttgcaaat gacgttccca tagtgacgga tgaagaagat ttttctgtca
      301 gcagattcct gatattgctc cgcaacaatt tcaattcgtc cggctttaat gcatcataca
      361 cttgtccccg aacattcccg tttttatcaa cgagtgcgat aaattgtgaa tggaggaatt
      421 gatcattgat atctgccacg ttattgtttg gatcgtcgat gaggtagctg ttccttgcag
      481 ccatgtaaag gctgtctttt ctcccggtta gaaaaaccca tctgcgcgtg tctactttca
      541 ttgagtcggc gtaatgttta agtcgtgttg cagaatctgt ttcggggtcg caggtatgcg
      601 atacgatcat gaaattcggc tcatcgagga actctttgta tatggtaaga agattcgaat
      661 tcatttcagg acaaatccct ttacacgacg tgaagaaaaa gttcactaca caaacttttc
      721 ctgccatatc tttttccgta aaagttttat tatcctctgt tgtgaaatgg aaaggtttta
      781 caaaactgat ggttggtgat ttcgatttcc acttatcggt gcctgcaaac acgaacacaa
      841 gaaacagaac cgtaagcacc acaaaaaaaa gggtgtatcc aattactttc cttcgcatgg
      901 ggcaaaggta tagcaggcgg aaacaaggaa ttgttaacga aaaaaatttt gcaacggcgt
      961 tgcaaactta tactttcgct tttcaatggt taaggcatta gcaaaaaaaa taaacctgga
     1021 tgcgttaggc atctccacat ccttgctttg cgctattcat tgcgccgtat tgccgctttt
     1081 ctttacaagc ctgcccgttt tcgggtttga gatcctacag aataaaacgt ttgaatatag
     1141 tatgatcgct ttggcggcga ttattggcat atccgctttg cgccatggat ggaagcgaca
     1201 tcaccacaaa agcttgccgc tcgtcgtgtt tgtgaccgga ttgttgtttc tcattgtgaa
     1261 agaaattttt ccctcgcagg aattcttatt attgattcct gcagcaacgc ttattatcag
     1321 cgcccatttt ttaaacttcc atttttgcag gcaggcaaaa cattgtcata cgagcgattg
     1381 caaccatgag catttgttgg gctaattggc gacgatcatc gcacaatcac tagtgattta
     1441 tgacttgtac gttccgcgaa aaactttctt ctaaagaaat gatcgtatcg gtgcgctcaa
     1501 tgcctttgat cttctgtagt tcgtcgtgca aaacaaattt caactggccg atgtccttgc
     1561 aaactacttc agcaaacata ctgtagttgc cagttgtgta gttcaagcga actatctcgg
     1621 gaattttttt aagttctctt gcaacactat cgtacagtga acttttttcc aggtaaatgc
     1681 cgatgaatgc aattacatcg tatcccaaaa ctttatgatc gacatgcatt ttggtgcctt
     1741 tcacaattcc gatatcctgc agctttttga tgcgcacatg aatagtccct gcggatacaa
     1801 acagtttctt tccgagttcc gcataagaaa tgtttgcgct gtccatcatt tcctggatga
     1861 tctgaaagtc caatttgtca agattcaatt ttgtgctcat gaaaagagtg ttttttgaaa
     1921 aaaaaccaac gatacaggca agttattaaa cattgtctaa aagttttaaa tttatgttga
     1981 aataaatata ttgaatcggt attatggatt aatattgcat cagcaaaaca gcgagttctt
     2041 taaatacact gtggggtgat gaaacctttg gcagacatgc cctctcgtct cgggggtggg
     2101 gatcacagga taaacaaagc gtagagccga cgttactttt ggtaaggccg accagggttg
     2161 accactaaac tttgcacttt ggctaactgc cccgtggagg ttcgaatcct ccccctacag
     2221 ctaagaaaag cctcaacata tgcacatatg ttgaggcttt ttgttttggg tgattcatta
     2281 atttttcttg ccagcattca tcaacatttc ggcaagggcg gtactaattt tcaggccgct
     2341 atgcagctcg aagtacgaat acgcgggcga tgaatttgct tcaaaacaat accactcatt
     2401 gtctggtgtt ctcatcagat caattcctga aaaatgaagt cccaacgcgg cagtcaacgt
     2461 gcaacatttt tcagctatct cagaaggcaa ctcttcaatg aacatcagcg tttttccata
     2521 gcggtagtca agattatctg attcgatccg cacggaaaaa actttatcgt tcaccacatg
     2581 aacccggtag ttgtcacccg gaacaaattc ttgaaacaac gtagggcacc acttcacatc
     2641 ctccaaatag tcataatgag attctgaaac ccttttgacg atacttctta cgccactgac
     2701 cgatttgtaa acgcattctg cattcgtctt aatgaattgt gccgcagccc gcggttcatt
     2761 ggtgataaaa gtctccggga tcttcagtcc aacctgcctg atgaccgata attgataagg
     2821 ttttgaatta ttggaagcgg atgcctcaga cctgttaacg acaaatgcgc ccgacgtgtc
     2881 caggcacaac atgaattgat gctcaaatcc catggcagta actgcggcgg gatcatctaa
     2941 ggaccttccc tgcatttgcg ggtagtccat aaaattgtaa gggcgcgtat aaaccgaact
     3001 cacgtctgca agatcgaacg atatctccgg cgcattaatg atcactttat ccgggccgtc
     3061 atcgctgcaa ttaaattcaa ttgaataatt aaaaatattt cgatggtcca gaaacagata
     3121 attcgctcct gccttattaa gctcgtcgcg aaccatgctc atcggactgt cttccgagat
     3181 gccataaagt aagatcatgc gttgtaacaa ttaaaggtat ttcaacatcg catcacgata
     3241 gctggcgata gtgatgtcag gaattgcatt gatatccaag agctgaaaat tcttactatc
     3301 tgccgttgaa aaataacagc tcaaatacgg aagtgaaaac tcttttgcga gcagcttgac
     3361 atagccgtgt acatgttcgt tttcattctc cattatctcg tcgttaatta tggtgcatga
     3421 aaaagtttgc aacagatctt tttggacggc atattcatac tttccatttt tcataataaa
     3481 aggcacaatg ggaatattta atttcctcgc aatttttagc cattcaaatt tctgaaacca
     3541 tagacctccg aggctccgtc ttgtaggcgg gttaattttt ttgcacttta atgctgtcag
     3601 aaaataattc ataaacgcat ttacctccga acaaacgtat tccctgtctt cctggtttat
     3661 gtaataaaat tctattggtg aaaatgccgg aatagttact atcacaccgg ttagctcgtc
     3721 gggcgttgtt tcatacccgt ttattgttaa tgaggaagac gagaaattat ttacggagat
     3781 acctgcttta aacgaacgat taaaatcgga ggccgtgatc aatgaaactg cacccgccgg
     3841 caatgaactt acccaggcag gtgcagcttc gttagcaatg ttacttatca gaaggatcaa
     3901 aaaaaactta ttgcggttta aaaccctgtg ctgctatctc tttaccgaca accggtcgct
     3961 cctggatcct gataaaagac tgacccatct ctttgatctg ttgttccagg tttgaaactt
     4021 tgtcaacaag accctgtatc gtttgctcga ccggaccgcc gatatttttc catggatccc
     4081 cttcgccggc tgcatccttc catttaggta gttccgaagc caggtctttt cgcggactat
     4141 cgatagtgac cggtttgtcg gccagccatt ctttcataag atctttaatg tccttataaa
     4201 acgacttttg ctggcgtcca taaaatgcga aagcatatgg attagtacct gcgccgaccg
     4261 ttaacgcagc gcctgacaca ttatcggctg aggtgcccgt gccttctacg atctgccagt
     4321 catgaaagta catatcgctt ggcataatgt gggtatatgc agtgatggtc tcatcacctc
     4381 cctggctgct gacccaacca tagacgtttc cggaactcgt taagtttccg ccagagtccg
     4441 ggctaacggt tacaaacgtg tcgtcgcaaa actggccggt ttctgcgttg aacgcatcga
     4501 tgatagctcc gctttcgccg cccggtcctg tgcccccggg tggaatataa acgttcgtta
     4561 caagaattgg ggaagtgcca acggtgcctg aacagggcgc catgatgttg gttgatattt
     4621 gtccgccctc gaccaggccg gtcacacttt gaaaagcaaa cctataatcg ggtatgcatg
     4681 gtaaacctgc tggtgggaaa gggaacgggg ccgtaaatgg tgtcccggtt acatacgtgt
     4741 ttggtggttg ctgcgaatag caaacaatag gaccgagccc gggcggataa acgcccggca
     4801 tgggagacct cggctggcgg ctgcgacccg cgccaacaac gtactgaaaa catctgatcg
     4861 ttgcttgtgg catattattc tatttagatt tttcgcttac tctttgccgg attttcagct
     4921 tactccgtct tctatgcagt tgattaaggc gtgatcatag tcgaaaccac tggcattgct
     4981 aatgccagct tgttgtttcg ctatatcaaa aattttttca ccggattcga tgacttgcta
     5041 ccagcgaata atcgcttgct tattatagcc ggtttgaaaa aattgttttc ttaaatgaac
     5101 ctgtactgca aataagattg gtaaaaattc gcagcaagtt atcacgaggc aggaatacat
     5161 gggagccgtc caatgtgtga cggcctgcac atcatagaaa ttggattcgt aattattgat
     5221 gaaagttaga gcatatttta taaaggaaaa atctttttta gaaaagcgaa tcgcaatttg
     5281 ccgagcataa acacggggtg gtcggtcatt aaaaatcatt cgttctctct acgcaacttt
     5341 cgtaataaaa ctttggatgc cgatctcagc tcgcctgaac cggcatcgat cacaattatt
     5401 gatttgcata acgggtgatt aacttctatt cgccgaacaa cataaaatag gttactattg
     5461 taccggcggc acgaaaacca aactgctaaa cattctaact gccaggattt aaaatttgga
     5521 ctgatcttat cttgaattag aaacagaaaa ccaaaacagt atgcctgata attcgagcga
     5581 caacatattt gccagcctga aaggccttat atggagtgcg tttattggtg ttgtatcgtt
     5641 tcagatctta gctcctaaca tctgggacta tttgca
//
LOCUS       DASQJI010000130         2481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1700553,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000130 DASQJI010000000
VERSION     DASQJI010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700553"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VEV83_03885"
     CDS             complement(<1..546)
                     /locus_tag="VEV83_03885"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYK44283.1"
                     /translation="MNTPLNVNAVNKLPLGDGGLRTIAIVMDIGGTKIKLGLVKDDKI
                     ICTRSIDADSANGLKEKLQVIAKLVDEMLLDQHVSLNDVAGVGISMPGIVDSKQKKVL
                     SIDNKFNDVVELNLTEWVNNTWHTNLEMENDARCALIGEWKYGKGRSSDNVVLMTIGT
                     GVGSSAVIEGNVLRGKHFQAGC"
     gene            complement(599..2077)
                     /locus_tag="VEV83_03890"
     CDS             complement(599..2077)
                     /locus_tag="VEV83_03890"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK44284.1"
                     /translation="MKKYSFAALIMLAAVVLTFSSCKKFLEEDPKNLITDANFFQTEN
                     DAVAAVNAIYSYLNSTSTGSTAGVYHSTFWVIAGCASDEMKDSSIFWPDISQISNFSH
                     GPINNSLEETWTVQYKAITLANLAIDNIPQIQMDTVLRTRLINEAHFLRGLLYFNMVR
                     MFGTIPLVLHESDPLTPPIASVDDIYNQIIADLTAAQALPLNYEPGNGRGRATSGAAN
                     AILAKVYLTLKEWDKCAERCKDVMNSNQYALWDDFADVFKLSSRGGKEAIFSVGFGDG
                     GGAISFWEVGQFNVRLLPPQLSVEGVQNAQGWQVPTLELYNEYDLLDRRREVTFITEI
                     HNPDGSITVIRPYIQKYWDRAAEPEGNGSANDFPVIRYADVLLMYAEAENELDNSGEA
                     HTYINMVRKRARWDGAVERNAVPDYVGLTKEQFRAAVLKERRLEFVAEGQRWFDLVRT
                     GTLETLVPIAKPGIVPQAKHYLFPIPQREIDLNPNLKQNEGY"
     gene            complement(2095..>2481)
                     /locus_tag="VEV83_03895"
     CDS             complement(2095..>2481)
                     /locus_tag="VEV83_03895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK44285.1"
                     /translation="NFTGQNNVLASAALDRWTPENHSNQNPRAYAASSLDVGIFSSAI
                     VEDASYIRLKNVTLSYTLPRSILQRAKIQSVRLYVSGSNLWTLTDYTGYDPEANTYGQ
                     NTTVIGIDNGGYPQSRTYQVGATLSF"
BASE COUNT          643 a          624 c          495 g          719 t
ORIGIN      
        1 acagccggcc tggaaatgtt ttcccctcag tacatttcct tcaatcactg cagaagaacc
       61 aacaccagtg ccgatggtca tcagcaccac gttatcactg ctcctccctt taccatattt
      121 ccattcgccg atgagtgcac atcttgcatc attttccatc tcaagatttg tgtgccatgt
      181 gttatttacc cattcagtca aattcaattc caccacatca ttaaatttat tgtcgatcga
      241 aagaactttt ttttgtttgc tgtcaacaat ccccggcata gaaattccaa cacctgcaac
      301 gtcatttaaa cttacgtgtt gatcgagcaa catttcatcg acaagctttg caatcacctg
      361 taatttttct ttcagcccat ttgccgaatc agcatcgatg cttcttgtac aaataatttt
      421 atcatccttt acaagaccca gtttaatttt tgttccaccg atatccatta cgatcgcgat
      481 ggtgcgcaag cccccatccc ctaaagggag tttattaaca gcgtttacat ttagcggcgt
      541 attcaatttc agtgtttcaa agtttactta cagctccctt ctccctttag gggcggggct
      601 aatatccctc gttctgcttc aggtttggat tcaaatcaat ttctctctgc ggaattggaa
      661 acaggtaatg ttttgcctgc ggcacaatgc caggctttgc gatcggcacc aatgtttcca
      721 gcgtcccggt acgaaccaga tcaaaccagc gctggccctc ggcaacaaat tcaagtcttc
      781 tttctttcag caccgcagct ctgaattgct cttttgtcaa gcccacataa tcaggcaccg
      841 catttcgttc aacggcgcca tcccatcttg cgcgctttct aaccatattg atgtaggtgt
      901 gcgcttcacc tgaattgtcc aattcgtttt ccgcttcggc atacatcaac aaaacatcgg
      961 catacctgat cacaggaaaa tcatttgctg aaccgttgcc ttccggctcc gcggcacgat
     1021 cccaatactt ctgaatatat ggccggatca ctgtgatcga accatcagga ttgtgtatct
     1081 cggtaataaa agtgacttct cttctgcgat cgagaagatc gtactcatta tataattcca
     1141 gggtaggcac ctgccagccc tgcgcatttt gcacgccttc aacactaagt tgaggtggca
     1201 gcaatcgcac attaaattga ccgacttccc agaaactgat cgcaccgcct ccgtcgccaa
     1261 aacctactga aaagatcgct tcctttccac cgcgacttga taatttaaaa acgtctgcaa
     1321 aatcgtccca caacgcatat tgatttgaat tcattacatc cttgcatctt tcagcacact
     1381 tatcccactc tttcagtgtg agataaactt tcgcaagaat ggcattcgct gcgccgctcg
     1441 tcgccctgcc acggccattt ccgggttcat aattcagcgg caaagcctgc gctgcagtga
     1501 gatcagcaat gatttggtta tagatatcat ccactgaagc gattggcgga gtaagtggat
     1561 cagactcatg caacaccagc ggaattgtgc cgaacatacg caccatgttg aagtataata
     1621 atcctcttaa gaaatgcgct tcgtttatca gccgcgttct taaaacggtg tccatctgga
     1681 tttgagggat gttatcgatc gcaaggtttg cgagggtgat cgccttgtat tgaacggtcc
     1741 atgtttcttc taatgaattg ttgatgggcc cgtgagagaa gttgctgatc tggctaatgt
     1801 cgggccagaa aatagaacta tccttcattt catctgaggc gcaacctgcg atcacccaaa
     1861 atgtgctatg ataaactccc gctgttgagc cggtgcttgt agagttcaga tacgaataga
     1921 tggcatttac ggccgcgacc gcatcatttt cagtttgaaa aaagttagcg tccgtaatta
     1981 aattctttgg atcctcttcc agaaattttt tacatgaaga aaatgtgaga acaacagcag
     2041 caagcatgat cagcgcagca aatgaatatt ttttcatgac gataagatta agatttaaaa
     2101 actgagcgtg gcaccaacct ggtaagtcct tgattgcgga taaccgccat tatcaatgcc
     2161 tatcaccgtc gtattctgcc cgtatgtatt agcttcagga tcatagcctg tatagtcggt
     2221 gagcgtccac aaattgcttc cacttacgta aaggcgtacc gattgaattt ttgctctttg
     2281 taaaattgaa cgaggcagcg tgtagctcag tgtcacattt tttaatcgta tataagacgc
     2341 gtcttcaacg atggcagaag aaaagatccc aacatccaaa ctgctcgctg cataagcacg
     2401 cggattttga ttgctgtgat tttcgggcgt ccacctgtcg agcgcagcgg atgctagcac
     2461 attgttttga ccggtgaaat t
//
LOCUS       DASQJI010000131         5564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_11343,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000131 DASQJI010000000
VERSION     DASQJI010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5564
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11343"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..773)
                     /locus_tag="VEV83_03900"
     CDS             complement(39..773)
                     /locus_tag="VEV83_03900"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK44286.1"
                     /translation="MKKIFGWSLSLFMLSVRCLIGPDAIAQKNLTDSLYTYGAASSGG
                     TGKFYLGREIAHVMGASNAEWLDRSSRPQEEHTQLAIDKIEIPENGVIADIGAGTGYY
                     TFKLAPRVPKGKVYAVEIQQEMINALNDRKKKTNSRNVEVIKGTTTSSELPANTVDLA
                     IMVDVYHELEYPVEMLRSIKNALKKDGRLLLIEYKGEDPDVHIRPLHKTTGSQLNKEL
                     GANGFKLVYDGEFLPLQHFLLYEITD"
     gene            1056..1229
                     /locus_tag="VEV83_03905"
                     /pseudo
     CDS             1056..1229
                     /locus_tag="VEV83_03905"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
     gene            1271..1423
                     /locus_tag="VEV83_03910"
     CDS             1271..1423
                     /locus_tag="VEV83_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44287.1"
                     /translation="MESIMEGQFDFGFQTRVERIYLLASKLVRADAPAGPGMTAAWLP
                     YVPAAN"
     gene            1585..2211
                     /locus_tag="VEV83_03915"
     CDS             1585..2211
                     /locus_tag="VEV83_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK44288.1"
                     /translation="MAFFLLSALSSFGATSAQRYLFYLHGKIVEDQGAHAKDTINGFG
                     SYLYEDILDAFRKNNFIVVSEVRQKDTDVEMYAKKVKEEIDSLLHKGVAASDITVVGA
                     SKGSVIAMLVSSLMKNEHMNFVFMAACNDYNFNSMPQINFCGNILSIYERTDDIGRSC
                     VSFKNRSQQKMPHYKEIELNTGLKHGFIFKPLSEWVKPVINWANGKYD"
     gene            complement(2282..3118)
                     /locus_tag="VEV83_03920"
     CDS             complement(2282..3118)
                     /locus_tag="VEV83_03920"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HYK44289.1"
                     /translation="MTPETFRQIPLFSTLTPEEIRDLLGQLQVIKYPAHAVIFWMEEP
                     GDQLYIIDKGEVRISRTTREGKEFTMAVLAEGAFFGELSLLDGGPHTGTARAVTETTL
                     LTIDQAQFYSFLDKHPPFSRALLATLVDNLRRNSNNIRDSSDIIVAPPSEGARRFVDR
                     AARTVATGKFLFFAALFLLAWISFQTWYYVHQHHKPVDFADTPPTFFLLGFLLTLTSF
                     LLTILVLTSQRRSAEHDRIQAEIEYQVNLKAQAEIMRLQLKMDQLIRQLEQNEKQREG
                     SN"
     gene            complement(3321..>5564)
                     /locus_tag="VEV83_03925"
     CDS             complement(3321..>5564)
                     /locus_tag="VEV83_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44290.1"
                     /translation="SGVWVDPKNENHVYVMNVQFWQSIDGGKTFTAINQEHGDNHDMW
                     INPSNPDNFIIGDDGSTAVTFNGGKTWTDEDLPTGQFYHVNLDNDFPYNAYGAQQDWG
                     PVRIATRTTNAFIGKNDWYIPAGGEAGYIVPDPTNPRVTYGGEYDGLLIRHDKSNEQY
                     SIVSVYPEVNDGAGVVEKKYRFQWTYPIAFSPWNNSTIYCTSQYVHRSTNGGMSWETI
                     SPDLTTNDTTKQRQSGGPITPDNTGAEVYCDIYAFAESSAKQGVLWAGSDDGLVHVSK
                     DNGAHWEKVTPPGLPKWATVSIIEPSHFEEGTCYLAAHAYRIDDTKPYIFRTTDYGKT
                     WQLITHGLPQNVYSRCVREDPNRKGLLYAGTETGVYVSFDNGERWHSIRQNLPVTPVH
                     DIQINKDLKEIVLATHGRGFWVLDDAGPLYEATHDILNSDYHLFTPRVSYRMDGFQVD
                     DPNLQEGTNAPNGVIVYYRLTKPLSGELKLEFLTEKGDSIIAYSSLKDRRGKAVDKNE
                     DFYEEKKDKIDEVLKNDVGTYRFVWDMSYGDAKRFSDEWIYNGQLSGPRALPGNYKVR
                     LYNGDKMLSERSFTIKLNPKVKSTQEDLQAQFDLENKITQKQTEVSTAIKQLQSVRKQ
                     VNDFINGFDDTVKIKPLKDLSKPILDSLQAIEEVLYQPKIKAGEDGLRYPVRLMEKLG
                     SLKQQVAQGDARPTQQSYDLFNDLSQRFDGPLQRLKNIIEVQIPKFNEAAAKYQSQAV
                     DVSKGLK"
BASE COUNT         1451 a         1302 c         1150 g         1661 t
ORIGIN      
        1 attttttggg cggaaggttt attcgtgatg gcgaccgttc aatcagttat ttcgtataaa
       61 agaaaatgtt gcaacggaag aaactctcca tcataaacaa gcttaaagcc atttgctccg
      121 agttctttat ttaattggct acccgttgtt ttatgcaatg gcctgatatg aacatcggga
      181 tcctcacctt tgtattctat caacaagagc cggccatctt tttttagcgc attctttatc
      241 gaccgcagca tctcaaccgg gtactccaat tcgtggtaca catcgaccat tatcgcaaga
      301 tccaccgtat tcgccggcaa ctctgaggaa gtagttgttc cttttatcac ctcaacattt
      361 ctgctatttg ttttcttttt tctgtcatta agcgcattga tcatttcttg ctggatctcc
      421 accgcatata cttttccctt tggcactctt ggtgcaagct taaaagtata gtaaccggtg
      481 ccggcaccaa tgtcagcgat cactccattt tcaggtattt caattttgtc aatggcaagt
      541 tgcgtgtgct cttcctgcgg cctgctgctg cggtcgagcc actcagcatt cgatgctccc
      601 attacgtgtg cgatctctct tcctaaataa aattttccgg ttccgccgga cgacgctgca
      661 ccgtaagtgt acaatgaatc cgtcaagttt ttttgtgcaa ttgcatcagg accgatgagg
      721 catcgcaccg aaagcataaa taatgagaga gaccagccga agatcttttt catgtcatga
      781 atttaggtac acgaaaacaa atgcccgaaa aagaaccaaa ttacaaatca caaaattcca
      841 atcaaagtga aatcatgttg cttttttgat ttacgatttc ttattttatt ttcgatcttg
      901 caatttgaga tttgcttttt tctttaagta tcctgatttg tcggctatta aagttgagtc
      961 gaatgatcgc tatccttgca gtaaatagtc tccaagtttc atgaacggga acgcacgtct
     1021 ttcccgcgaa agcgggaatc tgctaacttt acttcatgca atatggcggg atagtcgata
     1081 ccttaacaaa tgtgcaccat gaagtcttgt acattggcgt gacttctgac ctttttacaa
     1141 gaattccaga gcatatcatg aaggtttatc caaattcatt caccgcaaaa tataattgca
     1201 acaaacttct ttattatgag acatttggca gaatagagaa tgcaattgca aagagaaaaa
     1261 caactgaaaa atggaatcga tcatggaagg acaatttgat ttcggatttc aaacccgggt
     1321 ggaaagaatt tatttattgg cctcgaaatt agttagagca gatgccccgg cggggccggg
     1381 catgacggcg gcatggttgc catacgttcc ggcagcaaac tagcttaaca gcatttttcg
     1441 tggtcgatct ttataacaca acacgttaac ttctactctt tattacaaaa cggatccatg
     1501 gactcgtaca cggtaaaagc cggcatcgat gaagctgtga tttcaaaaca cattaaagtt
     1561 taaaccaata atattaaaat gaaaatggct ttctttttac tcagcgcgct ttcatcgttt
     1621 ggcgcaacat cggctcagcg atacctgttt tacctgcacg gaaaaattgt tgaggaccag
     1681 ggagcgcatg caaaagatac gatcaatggt tttggtagct acctgtatga ggatatcctt
     1741 gatgcgttca ggaaaaacaa ttttatagtt gttagtgaag tacggcaaaa agatacggat
     1801 gttgaaatgt atgcgaaaaa agtaaaggaa gaaattgata gcctgcttca taaaggcgtc
     1861 gctgcttccg atataaccgt tgttggcgcc tctaaaggat ccgtcattgc aatgcttgtt
     1921 tcttcactaa tgaagaatga gcacatgaac tttgttttca tggcagcctg caacgattat
     1981 aatttcaaca gcatgccgca aataaatttc tgtggaaaca ttttgtcgat ctacgaaagg
     2041 acggatgata ttggcagaag ctgcgtttcg ttcaagaatc gatcccagca aaaaatgccg
     2101 cactataaag agatagaatt aaacacggga ttgaagcatg gttttatatt taagccgtta
     2161 agcgagtggg taaaaccggt tataaattgg gcgaatggaa agtatgatta agccatgggg
     2221 cgttgttctt cttctaattt gcttcgcgcg gtatgttatt cgttccaact tcaaacgctc
     2281 ttcaattcga accttcccgt tgtttttcgt tttgctccag ctgcctgatc aattgatcca
     2341 tttttagctg cagtctcatt atttcagctt gtgctttcag gtttacctgg tattcaattt
     2401 ctgcctgtat tctgtcatgc tccgcggacc ggcgctgact ggtaagcaca agaatcgtaa
     2461 gtagaaaaga cgtgagcgtt aacaaaaatc ctaaaaggaa aaaagtgggc ggcgtatcgg
     2521 cgaaatcaac aggtttgtga tgctgatgaa cataatacca tgtttgaaaa cttatccatg
     2581 ccagcagaaa caacgctgca aaaaaaagaa atttgccggt ggctacagtg cgcgcagccc
     2641 gatcgacaaa tcttcgcgcg ccttccgaag ggggcgcaac aataatatcg ctggaatcgc
     2701 gaatattatt ggaattccta cgcaggttat caaccagtgt tgccagcagc gcccgtgaaa
     2761 acggcggatg tttatctaag aaagaataaa actgagcctg gtctatcgta agtaaagtcg
     2821 tttctgttac agcacgcgcc gtaccggtgt gcgggcctcc gtcgagtaga gaaagctcgc
     2881 cgaaaaacgc tccttcagcc agtaccgcca tcgtaaactc tttcccttca cgtgtagtgc
     2941 ggctaatgcg cacttctcct ttgtcaataa tatacaattg gtcgcccggt tcttccatcc
     3001 agaagatcac ggcatgagca ggatatttta ttacctgcag ttgcccaagc aaatcacgaa
     3061 tttcttcggg tgttagcgta gagaacagcg ggatctgcct gaatgtttcc ggcgtcatat
     3121 tttcataatt acagcgttat cttttgcgaa taattgaaac ctttgcacaa cagctaaatt
     3181 ttccaacact ttttcatcct ccactttcaa tactcacttt cgaagatgcg agggctttgg
     3241 atctttttcg ataaaagtgc gaacagggtc tcacgcaaac attctcctct ccatattccg
     3301 cgctttctaa ttcctctctc ctattttaaa cccttactta catccactgc ctgcgactga
     3361 tacttcgctg ccgcttcatt gaactttggt atttgaacct ctataatatt ttttaatctt
     3421 tgcaacgggc cgtcaaatct ttgagaaaga tcgttaaaca gatcatacga ttgctgcgta
     3481 ggccttgcat caccttgtgc tacctgctgt tttaatgagc cgagcttttc cataagccga
     3541 accgggtaac gtaaaccatc ttcgccggct tttattttcg gttgatatag tacctcttcg
     3601 atcgcctgca aagaatcaag aatcggctta ctcaaatctt tcaatggctt tattttcacc
     3661 gtatcgtcga agccattgat gaaatcatta acctgtttgc gcacgctctg caattgtttg
     3721 atcgccgtac tcacctcggt ctgcttttga gtgatcttgt tctccaaatc aaattgcgcc
     3781 tgcaggtcct cctgggtcga ttttactttc ggattcaatt ttattgtaaa agaacgttca
     3841 gaaagcattt tatctccgtt gtacaatctc actttataat tgccgggtaa ggctcgcggg
     3901 ccggagagct ggccattata tatccattca tctgaaaaac gttttgcatc gccataactc
     3961 atatcccaaa caaaccggta tgtgcccaca tcatttttca acacctcgtc tatcttgtct
     4021 tttttctcct cataaaaatc ttcgttcttg tcaacagcct ttcctctcct atcctttaag
     4081 cttgaatatg ctatgatgct atcgcctttt tcagtaagaa attcaagttt caattcgccg
     4141 gacaaaggtt tggtgagccg gtagtacacg atcacgccat tcggcgcatt cgttccttcc
     4201 tgcaaatttg gatcatcaac ctggaagccg tccattcggt aggaaacgcg cggcgtaaaa
     4261 agatgataat cgctattcaa tatatcatgc gttgcttcat acaatggccc tgcatcatcc
     4321 agtacccaaa aaccgcgacc atgggtagcc aaaacaatct ctttcaggtc tttgtttatt
     4381 tgtatgtcat gcaccggtgt taccggcagg ttctgtcgta tcgaatgcca acgctcgccg
     4441 ttgtcaaaag aaacgtaaac tcctgtttcg gtgcccgcat acaataagcc tttccgattt
     4501 ggatcttccc gaacacatct tgaatacaca ttttgcggga gtccgtgcgt gataagttgc
     4561 caagtcttcc cgtaatctgt cgtacggaaa atgtaaggct tcgtgtcgtc gatgcgatat
     4621 gcatgtgcgg cgaggtaaca agtgccttct tcaaaatgcg aaggttcgat gatgctgacc
     4681 gttgcccact tcggtaaacc tggcggcgtt actttttccc aatgcgcgcc gttgtctttg
     4741 ctcacatgca caagaccatc gtcgctgcct gcccatagca cgccctgctt cgccgatgat
     4801 tcagcaaatg cgtagatatc acaatacact tccgcacccg tgttatccgg cgtgatcggc
     4861 ccgccgcttt gtctttgttt cgtagtatca ttcgtggtaa gatcagggct aatcgtttcc
     4921 caactcatac cgccgtttgt tgaacggtgc acatattgag acgtgcaata gatcgtactg
     4981 ttgttccagg gtgaaaacgc gatcgggtaa gtccactgaa aacgatattt cttttctacc
     5041 accccggcgc catcgtttac ctcaggataa actgaaacga tcgagtattg ctcattgctt
     5101 ttatcatgac ggatcaggag cccgtcgtac tctccaccat acgtgacccg cggattcgtt
     5161 ggatcgggaa cgatataacc tgcctctccc ccagccggaa tataccagtc attcttgccg
     5221 atgaaggcat tggtagttct agttgcgatg cgaaccggtc cccaatcttg ttgcgcccca
     5281 tatgcgttgt acggaaaatc attgtcaagg ttcacgtgat aaaattgtcc ggtcggaaga
     5341 tcttcatctg tccacgtttt tccgccgttg aatgtaacgg ccgtacttcc atcgtcgccg
     5401 ataatgaaat tgtccgggtt cgaaggattg atccacatgt cgtggttgtc tccatgttcc
     5461 tggtttatcg cggtaaatgt ttttcctccg tcgatcgatt gccaaaactg aacgttcatc
     5521 acatacacat gattttcatt ttttggatcg acccaaacgc cgct
//
LOCUS       DASQJI010000132         8747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1393790,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000132 DASQJI010000000
VERSION     DASQJI010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8747
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393790"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VEV83_03930"
     CDS             <1..610
                     /locus_tag="VEV83_03930"
                     /inference="COORDINATES: protein motif:HMM:NF025182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4185 domain-containing protein"
                     /protein_id="HYK44291.1"
                     /translation="SPPFNGQRQIETSLHINNKTLGEGNMGAGLLVNTKWAGAPAPDG
                     YVYVYGCIGNDKNLVVARVQPKDFEKLSEWRYWSGSGWSENKDEMKSLTNAVSNELSV
                     TPLKNGKFLLVFQVLGLSDKVGVRIGDSPVGPFSDIIEVWKCPEWDKGLWTYNAKAHY
                     NLSKPGELLISYNTITPDFWNDIQKDATIYHPRFIKLKFEDR"
     gene            997..3363
                     /locus_tag="VEV83_03935"
     CDS             997..3363
                     /locus_tag="VEV83_03935"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYK44292.1"
                     /translation="MKNSRCIQKAKLFPKQLRGELYSPGSFQIYFYNVRKRIFLLFKA
                     AILITLNLHAQQQPYKPLRITEKIILDGQLDEPAWREAPLEDDFMQYDPSAGAAPSEK
                     TEVRIIYDDDYLFVGLRAYDREPSKLIANALERDFELGNDDGFALVIDSYNDKSTGLV
                     LASNLLNARWDEEISGDGASENVNYNTFWDVASHIDSLGYTIEFRIPFSSLRFQTKDT
                     VTMGFKIVRLIKRKAELDLFPKCPPDVQDALFKVSLAREMQLVNLKSKRPFYIIPYAI
                     ANFAQENVLNADESGYEKNSTFLTRKNYVKNEALDKLLSNIGADAKYGLSKNFTLDLT
                     LNTDFAQAEVDNLIVNLSKYDVNLPEKRSFFLESQNYLSFTTSLEDELFISRTIGNEN
                     NQVVPIIAGARITGKTKEWQMGTLDMQTTAIESDSIDAHNFFVFRTRKFTDSLGSFFG
                     GIITNKINTSGSGGSYQSIGMGGVKVFNPNLSLLANVAGTFKDADVTDFAKRSYYNVS
                     ISRTAKQGWNYYTELGLIGKDFQPEMGFVQENDLGNIALKGGYTWKAKEESKIAYYYV
                     HSNSRYKWKPSFHEEESKFINGEAGISFKNGAEIQTTPVEYFVDTLFEAWDISDHIHI
                     PQKTYHMFTPDVDIIAPAQSTYNAGLSMKWGDFYGGNRISISPTASYIFNKHFKVGIE
                     YEYDRVQFPDEYSDNGNALFQSNLLRLNIGYFLNSKISVKLFSQLDDLSNQVTSNLRF
                     RYNPEEGTDLYIVFNQGLNTDRTRLDPHLPVVDAQALTIKFIKTFDMK"
     gene            complement(3618..4973)
                     /locus_tag="VEV83_03940"
     CDS             complement(3618..4973)
                     /locus_tag="VEV83_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK44293.1"
                     /translation="MPAAIVAIGGDLNKLHLLQHSPYLLYSDGRGNIFEDQSLYAVGR
                     AGWDAFPIADDDWIELPHGGNLYELPGRTAIGIDVRTGQMRLCEKGLAVAAFIPPAHT
                     GLYLAAYESKPGAPTLPLFCYTAAGWHNNKFYVPAVRIEKDVRQECAGYDDEKIRTGA
                     EYLLQSYPHNRLVKHLMENCCLTYHCPAARNLSLARWECPVPSSPACNANCIGCISFQ
                     PEEETIVSTQDRLTFRPTPEEIAEFSVPHLLHAPYPIISFGQGCEGEPLLMWETICDA
                     IIEIRKHTQRGSININTNGSKPAAVEALCKAGLNSIRVSMNSAQPHIYAAYYRPNNYV
                     FEDLVETLNVVERYNGWTSINYFVFPGITDSVEEYEALRHFIRQTNLRMIQWRNFNID
                     PDWYLGKIGIVETGEMLGIKQLMELLKEEFPHLKFGYYNPPMERIKGDFEMDFARAVM
                     R"
     gene            complement(4937..5515)
                     /locus_tag="VEV83_03945"
     CDS             complement(4937..5515)
                     /locus_tag="VEV83_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44294.1"
                     /translation="MARKKEYNFVVTLKHPPYRLYNAIGILLCLMATTAEVVGLLYSG
                     FATIMWINVGLVAFIIIYMIVTLVFFNNKKYVAGFGWPLFAGALLWFFAPLRNLVISL
                     SYVLAAFLEMQLKFPQEIGFDEEEVAFNHFPSKNYSWDEIQNVILKDNIITIDFKNNR
                     IFQKETETETKPELEKEFNDFCRQQLSLSAVI"
     gene            complement(5515..6558)
                     /locus_tag="VEV83_03950"
     CDS             complement(5515..6558)
                     /locus_tag="VEV83_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase family protein"
                     /protein_id="HYK44295.1"
                     /translation="MADLSKFDVNAVGNPDNNIFGLPFTEEESLVILLPVPWEVTVSC
                     NPGTARCIEHIFKASTQVDLLDTNLPEGWQKGFFMKETDKKILMKSDYLRKEAELYID
                     FISHGQDVKNNKFMTKSLKEINEGSAMLNKWVYEQTRDLLNRDKLVGLIGGDHSVVLG
                     YYKSLAEKYGSFGILQIDAHCDLRQAYENLNYSHASIMYNALEEIPAIEKLVQVGIRD
                     YSPAELKYISDSNSRVVAYFDEQMKEREFSGDTWTIISDEIVSQLPHHVYLSVDVDGL
                     DPKLCPHTGTPVPGGLQIEQLVFLFKKVVDSGRKVIGFDVVETGVGDSNYDAVVASRL
                     LWKMCNLLVKSNS"
     gene            6650..7501
                     /locus_tag="VEV83_03955"
     CDS             6650..7501
                     /locus_tag="VEV83_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase family protein"
                     /protein_id="HYK44296.1"
                     /translation="MSCNPGKSYKTLCLALAACLFILSSHAASVDTVLIYSNSMHKNV
                     KCVVIKPAAYEDEKQRFAVLYLLHGWSGDYSNWVLKVPALLQEVDENGCMVVCPDGAY
                     NSWYFDSPIDTNIRYETNVALEIPAYIDAHYRTIADRKARAITGLSMGGHGALYLAIR
                     HEDVFGAAGSMSGGVDFRPFPNNWDIKKVLGDYSTHAEDWNKNVVVDLVDSLHNGDLK
                     MIIDCGVGDFFLPVNRDLHQKLLAAKIDHDYIERPGEHNWDYWSNSIKYQLLFFHDYF
                     LEQKVLN"
     gene            7510..8532
                     /locus_tag="VEV83_03960"
     CDS             7510..8532
                     /locus_tag="VEV83_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44297.1"
                     /translation="MEISKRNASATFTVNLFGGAIIGFHFLDGDHINPLSFAFSKDQM
                     PDNNKAGAPYRGHFLCLGRWGLPSAGEIKAGVPNHGEIANIVWRQRDAGELVLKMETT
                     SMLEGLRVERSMQLDHNDAVLAVKETVSNINPLGRLYNMVQHPTLAAPFLNASTIINS
                     NATIGFNQSCYKQVAASTFTWPNVKHENGAVIDLRNPAAKYNSVFSFVADKNAETGWI
                     SAYSPEFNLLFGYVWQRSDYPWIHLWQHWEDNTIKYRGIEFGTAGIHQPFKEILMTST
                     RLFGEKTFEYIDAGESVSKKYFSFLYKPVNKITGVNNIKIECEYINVMTNQDETIRLH
                     ISCDQL"
     gene            8529..>8747
                     /locus_tag="VEV83_03965"
     CDS             8529..>8747
                     /locus_tag="VEV83_03965"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK44298.1"
                     /translation="MNWTDKIALITGGAKGIGAATAKLFYDEGATVVTLDIEHKPDVK
                     DERMLCLKCDVSDEAQVREAFQNIAKRFS"
BASE COUNT         2539 a         1908 c         1934 g         2366 t
ORIGIN      
        1 aagccctccg tttaacgggc aaaggcaaat tgaaacctcg ttacatatca acaacaaaac
       61 acttggcgaa ggaaacatgg gggcaggtct tttggtaaac acaaaatggg caggcgctcc
      121 cgcgcccgac ggatatgtat atgtgtacgg atgtatcggt aatgataaaa accttgttgt
      181 ggcaagggtt caaccaaaag attttgaaaa gctcagcgaa tggagatatt ggagtggcag
      241 tggatggagc gaaaacaaag acgaaatgaa atcgttgacc aacgcagttt caaacgaact
      301 cagcgtgaca ccattaaaaa atggaaaatt cttgttggtg ttccaggtgt tgggattaag
      361 tgataaggta ggagtacgca ttggagacag tcccgtcggg ccgttttctg acattatcga
      421 agtttggaaa tgccctgaat gggacaaagg cttatggacc tacaatgcaa aagcacatta
      481 taatttatca aagcccggtg aattgctgat ctcgtacaac acgatcacgc cggatttttg
      541 gaatgacatt caaaaagacg cgacgatcta tcatccgagg tttattaagt tgaagtttga
      601 ggacaggtga gcgtcatttt gctgaagcct ttcttcttgg ttcttccgct acctacatgt
      661 tgaactaaca cgtcgctgca ccgtcatttc gatcctgccg gccgggagag aaatctctac
      721 gtggaaatcc ggccggcgtg ctcaacaact ctgttgagat ttctcagtcg cgggagggaa
      781 gcacaccggg atgactattc gaatcgctcc tttgaaatga cgccaatatc gacgctatgg
      841 aacaacagtg ccggcacttg taaaacacgt catcaaacct tacgtcaaga gaaaaagaaa
      901 ttttgtcgtg ccttgttgat ggaatgagct ataggctgat tgccgaaaaa tgcttcatca
      961 gtattgatac cgttggggga cacattcgaa atatttatga aaaactccag gtgcattcaa
     1021 aaggcgaagc tatttccaaa gcaattaaga ggcgaattgt atagtccggg ttcatttcaa
     1081 atttattttt acaatgtgcg taaaaggata tttctacttt tcaaggcggc tattttaata
     1141 accctgaatt tgcatgcaca acaacagccc tataaaccat tgcgcatcac cgaaaaaata
     1201 atattagacg gacaattaga tgaacctgcg tggagagaag cgcctcttga agacgatttt
     1261 atgcaatacg atccgtcggc cggagccgca ccgtcagaaa aaacggaagt gcgtattatc
     1321 tacgatgacg attatttatt tgtcggactt cgcgcttatg acagggagcc ttcaaaactt
     1381 atagctaatg cccttgagcg ggatttcgaa ttgggtaatg atgatgggtt tgccctggtg
     1441 atcgacagct ataacgataa aagcacaggt cttgtacttg ccagcaatct tttgaacgca
     1501 aggtgggatg aagaaatttc cggagatgga gccagtgaaa atgtaaacta caatacattc
     1561 tgggatgtgg caagccatat tgattcttta ggctatacaa tagaattccg cattccgttc
     1621 tcttcgttaa ggttccagac aaaggacacg gtaacaatgg gtttcaaaat agtgagattg
     1681 atcaagcgca aagccgaact cgatcttttt ccgaaatgtc cacctgatgt ccaggatgcg
     1741 ttgtttaaag tttcacttgc ccgtgaaatg cagttggtga atttaaaaag caaaagacca
     1801 ttttatatca ttccgtatgc cattgcaaat tttgcccagg aaaatgtttt gaatgctgat
     1861 gaaagcggtt atgaaaaaaa ttccactttc ctaacccgga aaaattatgt aaagaatgag
     1921 gccctggata aattgcttag caatattggt gcggatgcca agtatggtct cagcaagaat
     1981 ttcacactcg atctcacact aaacacagat tttgcccagg cggaagtaga taacctcatt
     2041 gttaatttat ccaagtatga tgtgaacctg cctgaaaaaa gaagtttttt ccttgaatca
     2101 caaaactatc tcagtttcac aacctcgctt gaagatgaac tattcatttc acgcacaatt
     2161 ggcaatgaaa acaaccaggt cgttcccatt attgcaggcg cacgtatcac agggaaaacc
     2221 aaagagtggc aaatgggtac attggatatg caaaccaccg caatagaaag cgattcaatt
     2281 gatgcacata acttttttgt ttttcgcacc aggaaattca cagattcact cggcagtttt
     2341 tttggaggaa taattaccaa taaaataaat acgagtggca gcggaggctc ttaccagtct
     2401 atcgggatgg gcggagtgaa agtatttaat ccaaatttat cattgcttgc aaacgttgca
     2461 ggtacgttta aagatgccga tgtaactgat tttgcaaaac gctcgtatta caacgttagc
     2521 ataagccgca ccgctaaaca gggttggaat tattatacag aactcggttt gataggaaaa
     2581 gattttcaac cagagatggg ctttgtccag gaaaatgacc tggggaatat cgcattaaaa
     2641 ggcggatata cgtggaaggc aaaagaggaa agtaagattg cctactatta cgtgcacagt
     2701 aattctcgct ataaatggaa accgtctttt catgaagaag aatcgaaatt tataaatgga
     2761 gaggctggca tcagttttaa gaatggcgct gaaatacaaa caacgcccgt tgaatatttt
     2821 gtcgacactt tgtttgaagc ctgggatatt tcagaccata ttcacattcc ccaaaagaca
     2881 tatcatatgt ttacaccgga cgtcgatatt atcgctccgg cgcaaagcac gtataacgca
     2941 ggtctttcta tgaagtgggg cgatttctac ggcggaaaca gaatttcaat tagtccgacc
     3001 gcgtcttata ttttcaataa acattttaaa gtagggattg aatatgaata cgaccgcgtt
     3061 caatttccgg atgagtattc tgataatggc aatgcattat ttcaaagcaa tctgctgaga
     3121 ttaaatattg ggtatttctt aaactcaaaa atttctgtaa aattgttttc ccagttggat
     3181 gatctgagca accaggtaac aagcaacctg cgttttcggt acaacccgga agaaggaacg
     3241 gacctgtata ttgttttcaa ccagggtcta aacacggacc gtacaaggtt ggatccgcat
     3301 ttgccggtag tagacgcgca agctcttaca ataaaattta taaaaacgtt tgatatgaaa
     3361 tgagcaagtg atataatttg aaaacgtcaa acctttggtg caaccatttc acaacatcaa
     3421 cttttccatt taaggtagcg cctgcagtaa cacttcttta caccgtcatt tcgattccga
     3481 tccggtcggg acagaaatct taacgcggaa atccagttcg gtgctcacaa ttcgttgaga
     3541 tttctccagt cgcggaaaac atcgatgaag ggaacaagca gatgttgcgc tccttcgaaa
     3601 tgacggcaat gtcgacgtta tcgcataacc gccctcgcaa aatccatctc aaaatctccc
     3661 ttaattctct ccatcggtgg attataatat ccaaacttta aatgaggaaa ctcttctttc
     3721 agcaattcca ttaattgctt aatgccgagc atctcaccgg tttcaacgat gcctattttc
     3781 ccgagatacc aatccggatc gatattgaag ttgcgccatt gtatcatgcg gagattcgtc
     3841 tgccggataa aatgtcttag cgcttcatat tcttcaacgc tatcggtgat accaggaaag
     3901 acgaaataat ttatgctggt ccatccatta tatctttcaa ctacgttcag tgtttccacg
     3961 aggtcttcga acacataatt attcggcctg taataagcag cgtagatatg cggctgcgcg
     4021 ctgttcatgc taacgcgaat gctattaagg cctgctttac ataaagcttc caccgcagcc
     4081 ggctttgagc cgttcgtgtt gatgttgata cttccccgtt gggtgtgctt tcgaatttcg
     4141 atgatggcat cgcatatcgt ttcccacatc agcaatggtt ctccttcgca tccctgccca
     4201 aagcttataa tagggtacgg cgcatgcagc aagtgaggaa cgctgaattc tgcaatttcc
     4261 tccggtgttg gcctgaacgt taacctgtcc tgcgttgaaa cgatcgtttc ttcttcgggc
     4321 tgaaatgaaa tgcacccgat acaatttgca ttacaggccg gcgaacttgg taccgggcac
     4381 tcccacctgg ccagtgataa atttcttgcc gccgggcaat gatacgtaag acaacaattc
     4441 tccattaaat gctttaccaa acgattgtgc ggatacgact gcagtaaata ttctgcacct
     4501 gttcttattt tttcgtcgtc gtaacccgcg cactcctgtc gcacatcttt ttcaatgcgt
     4561 acggcaggca cgtaaaattt gttgttatgc catccggccg ccgtgtaaca aaataatgga
     4621 agcgtcggcg cgccaggttt gctttcgtac gcggcgaggt atagcccggt gtgcgcaggt
     4681 ggaatgaacg ccgcaacggc aagccctttt tcacacaaac gcatctgtcc tgtccttacg
     4741 tcaattccga tcgccgtgcg gccaggcaat tcataaagat taccgccatg tggtaattcg
     4801 atccaatcat catctgcgat tggaaacgca tcccagccag cgcggccaac cgcatacaaa
     4861 ctttggtctt cgaaaatatt tccccgccca tcggagtata acaaatatgg agaatgctgc
     4921 aacaaatgaa gtttatttag atcaccgccg atagcgacaa ttgctgccgg caaaagtcgt
     4981 tgaactcttt ttccagctcc ggctttgttt ctgtttcagt ttctttttga aagatcctgt
     5041 tgtttttgaa atcgatggtg atgatgttat ctttcaggat cacattttga atttcgtccc
     5101 acgaataatt tttggagggg aagtggttga acgcaacttc ttcctcgtca aaaccgatct
     5161 cctgtggaaa ttttaattgc atttcaagga atgcggccaa aacataagac aagctgatca
     5221 ccaggttacg caatggagca aaaaaccata acaatgcacc ggcaaacaga ggccagccaa
     5281 aacctgcaac gtatttcttg ttattaaaaa atacaagcgt aacgatcata tatattataa
     5341 tgaatgcaac caacccaacg ttgatccaca ttattgtggc aaagccggaa tacaataggc
     5401 cgaccacttc cgcagtcgta gccatcaggc acaacaaaat tccgatcgca ttgtataacc
     5461 ggtacggcgg gtgcttcagc gttacgacaa agttgtactc ttttttcctg gccatcagga
     5521 gttgcttttt acgagtagat tgcacatttt ccataacagc cgcgaggcga caaccgcgtc
     5581 ataattactg tcaccgacgc cggtttcaac cacatcaaat ccaatcacct ttcttccgct
     5641 gtcaacaact tttttaaaga ggaaaacgag ctgctcgatc tgcaatccac caggaacggg
     5701 cgttccagtg tgcggacaaa gcttcgggtc gaggccatcc acatcaacac ttaaataaac
     5761 atggtgcgga agctgggaaa ctatctcatc tgaaatgatc gtccacgtgt caccgctaaa
     5821 ctccctttct ttcatctgct cgtcaaaata ggcaacgacc cttgaattgc tgtcggagat
     5881 atatttcaat tctgcgggtg aataatctct tatgccaacc tgcactaatt tttcgatcgc
     5941 tggaatttct tcgagtgcat tatacatgat gctcgcgtgc gagtagttca aattttcata
     6001 ggcctgccgg agatcgcagt gcgcatcgat ttgtaaaatg ccgaagcttc catatttctc
     6061 tgcaagcgat ttataatacc cgagcactac gctgtgatcg cccccgatga ggcccaccag
     6121 tttgtcgcgg ttcaacaggt cgcgcgtttg ctcgtaaacc catttattca gcatcgcgct
     6181 gccttcattg atctccttca ggcttttcgt catgaactta ttgttcttca catcctgtcc
     6241 atgcgaaatg aaatcaatat acaactctgc ttcttttctc aaataatcgc tcttcatgag
     6301 gatcttcttg tcggtctctt tcataaagaa acctttctgc caaccctccg gcaagtttgt
     6361 gtctaaaaga tcgacttgtg tgcttgcttt gaaaatatgc tcgatgcacc tggctgtgcc
     6421 gggattacaa ctcacggtaa cttcccacgg aacaggcaat aaaatcacca gcgattcttc
     6481 ctctgtaaaa ggcagtccga atatgttgtt gtcaggattt cctaccgcgt taacatcaaa
     6541 tttcgacaaa tcagccatat aggaatttta aaaagatgtg caagatactg gctaatttta
     6601 gaaatgaagg agcgaaatat gtaccatatt tgagaaacgg tcacacgaaa tgagttgtaa
     6661 tcccggaaaa tcttacaaga cactctgcct tgctcttgca gcctgtttat tcattctcag
     6721 ctcccacgct gcttcagttg acacggtctt gatctatagc aacagcatgc acaaaaatgt
     6781 aaagtgcgtt gtgataaagc cggcggcata tgaggatgaa aagcaacgat tcgctgtttt
     6841 gtaccttttg catggatgga gcggagatta cagcaactgg gtgctgaaag tgccggcctt
     6901 gttgcaggaa gttgatgaaa acggttgcat ggtagtgtgt cctgatggtg cgtataacag
     6961 ttggtatttt gatagcccca tagatacaaa catccgatat gaaacgaacg tggcattaga
     7021 gatccctgcg tacattgatg cacactatag aacgatcgct gaccgcaaag caagagccat
     7081 caccggccta agcatgggcg gacatggcgc gctgtacctc gcaattcgtc atgaagatgt
     7141 gtttggcgca gccggcagca tgagcggcgg cgttgatttt cgtccgttcc ccaacaattg
     7201 ggacataaaa aaggtgttgg gcgattattc aacacatgca gaggactgga acaagaacgt
     7261 ggttgttgat ctcgttgact cgttgcacaa cggtgacctg aaaatgatca tcgattgcgg
     7321 tgttggcgat tttttcctgc cggtgaatcg cgacttgcat cagaaattac tggctgctaa
     7381 gatcgatcat gattacatcg aaaggcccgg agagcacaat tgggattact ggagtaattc
     7441 cataaagtat caactgcttt tctttcatga ctattttctt gagcaaaaag ttttgaactg
     7501 atcatcccga tggaaatctc taaacgtaac gcctctgcaa ctttcacggt taacctgttt
     7561 ggcggtgcga tcatcggttt tcattttctt gacggtgacc atattaatcc cctgagcttc
     7621 gctttttcaa aagaccaaat gcctgacaac aataaagcag gggcgcctta ccgcggacat
     7681 tttttgtgcc tgggccgatg gggcttgccg tctgcaggag agataaaggc cggcgtaccg
     7741 aatcatggcg aaatcgcaaa tattgtttgg cgacaaaggg acgcaggtga actggtgttg
     7801 aagatggaaa ccacaagcat gcttgaggga cttcgtgttg aaagaagtat gcagctcgat
     7861 cataatgatg ccgtgttggc ggtaaaagaa accgtttcaa acataaatcc gctgggaaga
     7921 ttgtacaaca tggtgcaaca tccgacactg gctgcgccgt tcctgaacgc gtcaaccatt
     7981 atcaacagta atgcaacgat cggttttaat cagtcgtgct ataaacaagt ggcagcaagt
     8041 acgtttacat ggccgaatgt aaaacatgaa aacggtgctg ttattgatct gcgaaacccg
     8101 gccgcaaaat acaattcagt tttctccttt gtcgctgaca agaacgccga aacgggatgg
     8161 atcagtgcat attcgccgga attcaatttg cttttcggat atgtatggca acgcagcgat
     8221 tatccctgga tacatttatg gcagcattgg gaagataata caataaagta tcgcggtatt
     8281 gaatttggaa cggcaggcat tcatcagcct tttaaggaaa tactcatgac ctcgacgcgg
     8341 ttattcggtg agaaaacatt tgaatatata gatgcaggtg aatccgtttc aaaaaaatat
     8401 tttagttttc tttacaagcc ggtaaataaa ataacgggcg tgaataatat taaaattgaa
     8461 tgtgaatata tcaacgtcat gaccaatcaa gatgaaacca tccgcttaca tataagctgt
     8521 gatcaattat gaactggacc gataagatcg ctctgattac cggtggcgcg aaaggcattg
     8581 gcgctgccac ggcaaaatta ttctacgacg aaggcgctac cgtggtaaca cttgacatcg
     8641 agcacaagcc agatgtaaaa gacgagagaa tgctctgctt aaagtgtgat gtgtcagatg
     8701 aggcacaagt gagagaagca tttcaaaaca ttgccaaaag attttca
//
LOCUS       DASQJI010000133         2886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1547169,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000133 DASQJI010000000
VERSION     DASQJI010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547169"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VEV83_03970"
     CDS             <1..591
                     /locus_tag="VEV83_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK44299.1"
                     /translation="AYFPDSGPVSSHIILSFKGKNGKPDVKLHWMDGGIQPERPEELL
                     PNEQMGDGGNGIIFIGTKGKMMAGTYGINPQLLPTSKTKETVVPQTIARVPGGDDGHY
                     AAWVEASIAGYGSDKANNLSSRFDVAGPLTESVLMGNLAIRSSDVRKKNANGDWDYPG
                     RHIQFVWDGENMKITNFDEANQFVKRTYRDGWSLGV"
     gene            735..1010
                     /locus_tag="VEV83_03975"
     CDS             735..1010
                     /locus_tag="VEV83_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HYK44300.1"
                     /translation="MVNDPNEPNRTDVGNNNSKQPGIPSNSNAEKNPDEWITGDEPMT
                     GAQRSYLKTLSDEAGEPFDETLTKADASKRIEQLQQKTGRGLNKTGN"
     gene            complement(1073..1303)
                     /gene="yidD"
                     /locus_tag="VEV83_03980"
     CDS             complement(1073..1303)
                     /gene="yidD"
                     /locus_tag="VEV83_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HYK44301.1"
                     /translation="MKQVLRILGLPFILLIKIYQHVLSPILGPKCRYTPTCSQYAIQA
                     LRKYGVLKGLWLAVKRISRCHPWGGSGYDPVP"
     gene            complement(1287..1679)
                     /locus_tag="VEV83_03985"
     CDS             complement(1287..1679)
                     /locus_tag="VEV83_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HYK44302.1"
                     /translation="MKQFTYSKTEKLKSRKQTEELFNKGKSFTIFPLRVVYLQVEQQE
                     GPAKAGVGVSSRNFAKAVQRNRIKRLLREGYRTEKIPLYHHLQNTGRHLTLFLLYIDK
                     QMPEYVLVKEKMRLVIQRLIKELSETGS"
     gene            complement(1731..1886)
                     /gene="rpmH"
                     /locus_tag="VEV83_03990"
     CDS             complement(1731..1886)
                     /gene="rpmH"
                     /locus_tag="VEV83_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HYK44303.1"
                     /translation="MKRTFQPHNRRRKSVHGFRKRMQTANGRKVLASRRAKGRKKLSV
                     SDERTLK"
     gene            2081..>2886
                     /locus_tag="VEV83_03995"
     CDS             2081..>2886
                     /locus_tag="VEV83_03995"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HYK44304.1"
                     /translation="MLTKFSLIVFLSASIISACRPVDRKPPQGMVLVPAGTNNQGKQM
                     KAFFMDVSPVTVARFDSFVRATGYVTEAQKFGNSEVFDTATHTWGLVDGANYLYPLGP
                     TKGKALANQPATQVSWHDAAAYCAWAKKRLPTREEWTYAAMNADGHYAKKYPWGDSLV
                     ENGKYRANVWEGSFPFFNTVADGFAYTSPVGFFGRTPLGLTDMGGNVWEWIEEWQNPN
                     DTASQTAEKLQMGGSCLCDWQVCHGYKIGNTAHSTPESGLCHVGFRCVKDV"
BASE COUNT          782 a          661 c          707 g          736 t
ORIGIN      
        1 gcgtattttc ctgacagcgg cccggtttct tctcatatta ttctttcgtt caaaggcaag
       61 aatggaaagc cggatgtgaa actgcattgg atggatggcg gcatacagcc ggaacgtcca
      121 gaagagttgt tgccaaacga acagatgggt gacggcggga atggaataat ttttattggg
      181 acaaaaggaa aaatgatggc gggtacgtat ggaattaatc cgcagttgct cccaacatca
      241 aaaacgaagg aaacagtagt tccacaaact atcgcgcgtg tgcccggtgg tgatgacggg
      301 cattatgcgg catgggtgga agcgtctatt gcaggctacg gcagcgacaa agcaaataat
      361 ctgagttcaa gatttgatgt agccggcccg ctcacggaaa gtgtgctgat gggaaatctc
      421 gcaattcgca gcagcgatgt gcgcaaaaaa aatgcaaacg gcgattggga ttacccggga
      481 cggcacatac aatttgtttg ggacggcgag aatatgaaga tcacaaattt tgacgaagca
      541 aaccagttcg tgaagcgcac ctaccgcgac ggctggagcc ttggcgttta atgttttcac
      601 gcaaagcagc gaagagctct caggacgcca aagaaattcc cctttccgcc gttgcgagac
      661 ttagcgtctt cccgtgaaac tgcacctttt tcagttatgg tttatttttt gcgtgttaac
      721 tgaaaacgtt ttttatggtt aatgacccta atgagccgaa tcgcacagat gttgggaata
      781 ataactcgaa gcaaccgggt attccttcta attcaaacgc tgaaaagaat ccggatgaat
      841 ggataacggg cgacgagccg atgacgggcg cacagcgctc atatttgaaa acattgtcag
      901 acgaagctgg tgagccgttc gatgaaaccc ttacgaaggc cgacgcctcc aaacgcatcg
      961 aacaacttca gcagaagact ggccgcggtt taaataaaac ggggaactga tgcattgtca
     1021 tcggtatgga gcatttacga ccttcaaacc tcaaacttca aacgtcaaac tatcaaggca
     1081 caggatcata tccacttcca ccccagggat gacaccgcga gatcctttta acagcgagcc
     1141 acaatccttt gagcactcca tattttctta gagcctgtat ggcatactga gagcatgtgg
     1201 gtgtgtacct gcatttcggc ccaaggatgg gcgacaacac atgctggtaa atctttatca
     1261 gcaggatgaa aggcagacca agtattctaa gaacctgttt cactcaattc ttttattaaa
     1321 cgctgaatga cgagccgcat cttctctttc accaaaacat attccggcat ctgtttgtcg
     1381 atgtacaaca aaaataatgt gaggtggcga cctgtattct gcaggtgatg atacaatgga
     1441 attttttctg tccgatatcc ctctcgaagt aagcgcttga ttcgatttcg ctgaaccgct
     1501 tttgcaaaat tccggctgct tacaccaaca ccggctttgg ctgggccctc ttgttgttca
     1561 acctgcaggt aaacaactct cagtggaaag atcgtaaagc tcttcccttt gttgaaaagc
     1621 tcttccgttt gtttgcggct ttttagcttt tctgttttgc tgtaggtgaa ttgtttcatc
     1681 aaacaaaaaa gtcccgcaag ggcgggactc aaaatatgat ttgtatatta ttatttcagt
     1741 gttctttcgt cagaaactga gagttttttg cggccttttg ctctccggct cgcaagcact
     1801 ttcctgccgt tggctgtttg catccgcttc cgaaaaccat gcacgctttt tctgcggcgg
     1861 ttatgcggct gaaatgtacg cttcataaaa aaaattttta atcttaaatg aatttcaact
     1921 aaaacaggca acagccacca tgctgttccc ggtgaaagga cggcaaaagt aaaggaatcc
     1981 gctgaataat ttgctattaa ctcccgaacg ctgccggttg aaataaattt tgataaattg
     2041 taaacatttc atcactgaac tttacggcct ttcaaaaaca atgctgacca aattctccct
     2101 tatagttttc ctgtcggcct ctattatttc ggcgtgccgg ccggttgatc gaaagccgcc
     2161 acagggtatg gtactggtgc ccgccggaac aaataatcag ggcaaacaaa tgaaggcgtt
     2221 cttcatggat gtttcacctg ttaccgtcgc gcggttcgac tcgttcgtgc gcgcgaccgg
     2281 gtatgttacc gaagcacaga aattcggtaa ttctgaagtg tttgacaccg ctacccacac
     2341 gtggggcctg gtagacggcg cgaattatct gtatccgctt ggaccaacaa aaggaaaggc
     2401 gctcgcgaac caaccggcca cgcaggtgtc gtggcacgat gcggctgcct actgcgcgtg
     2461 ggctaaaaaa cgattaccca cgagagagga atggacatac gcggcgatga atgccgacgg
     2521 ccattatgca aaaaaatatc cgtggggcga ttcactggtc gaaaacggga agtaccgcgc
     2581 caacgtatgg gaaggaagtt ttcctttctt caacactgtc gctgatggat ttgcttacac
     2641 ttctcccgta ggcttttttg gaagaacacc attgggcctt accgacatgg gcggcaatgt
     2701 ttgggaatgg atcgaagaat ggcaaaatcc aaacgatact gcaagtcaaa cagccgaaaa
     2761 gctacaaatg ggtggatcct gtctctgtga ttggcaggtg tgccatggat acaagattgg
     2821 caatacggca cattcaacac ctgagagtgg cctgtgccat gttggatttc gctgtgtgaa
     2881 ggatgt
//
LOCUS       DASQJI010000134         9117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_11625,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000134 DASQJI010000000
VERSION     DASQJI010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9117
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11625"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1422
                     /locus_tag="VEV83_04000"
     CDS             <1..1422
                     /locus_tag="VEV83_04000"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYK44305.1"
                     /translation="WYHDHAMGITRLNVYAGLAGFYVLTDDHELQLKAAHKLPADEYD
                     IGLAIQDRMFTTDGQLYYPADLEEQGQISPSIIPEFFGNFILVNGKAWPVLNVEPRQY
                     RFRILNGSDSRFYNLFLSGNKTFWQIGSDQGLLTAPVLMNQMLIGPGQRKEVIIDFSD
                     PALWGQTIIVQNNAKSPYRKGETVDPNTTGKIMAFRIDKPLNTNIAVSVLPAKYHSPI
                     APLVQNGPTRKLILGEFNDDLGRIEPMLGTVDGGAMDFDEPVTENIKLNDTEIWEIYN
                     TTVDAHPIHLHLVKFQAISRQKFTATTDPLTGKLTNIQLLGKPELSNVDEEGWLDTKV
                     MFPGEVTRIIAKFDRTGKYVWHCHILSHEDHDMMRPFIVIAPATTSQSAVQAASKNNL
                     SIFPNPLASIATIQMTLAEQGSVSIKIYNAQGTEVATVFSGDKAAGKYSIPFNAGKLS
                     AGVYICRLVINNEVLQQKLVIQK"
     gene            1743..2066
                     /locus_tag="VEV83_04005"
     CDS             1743..2066
                     /locus_tag="VEV83_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44306.1"
                     /translation="MKFKFIIPLLFLSGKLLAGYTVRVVVTGPVNNRTIYIAGTFNNW
                     NRCGTNYKLAPAGDNKQQIVLTNIPGGLVEYKFTKGGWENVETTNIATEIPNRRFHLT
                     RDTKR"
     gene            2287..2916
                     /locus_tag="VEV83_04010"
     CDS             2287..2916
                     /locus_tag="VEV83_04010"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HYK44307.1"
                     /translation="MLIQNFWVFALTALMLNLTPGNDMLFVIARSTSQGSKAGIVSSL
                     GIMAGCMVHIFAAMAGLSAVIASSSLAFDIIKYIGAAYLIYLGIRAVLSKKHSLEIKS
                     PVKKLSYKKIFWQGFFTNVLNPKVALFFLAFLPQFIDITKENTGWQILFLGTWFDVGG
                     TLVNIVVALLFGKVGQWLNRSAAFVQWQQRITGTLLIALGIKVALSSRK"
     gene            3220..3393
                     /locus_tag="VEV83_04015"
     CDS             3220..3393
                     /locus_tag="VEV83_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44308.1"
                     /translation="MARKNDIIVVRVRQSRFPPGVEMTVHDVFSTEFVGAVPYSRTVT
                     PDLTGASHLSGLV"
     gene            complement(3379..3714)
                     /locus_tag="VEV83_04020"
     CDS             complement(3379..3714)
                     /locus_tag="VEV83_04020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HYK44309.1"
                     /translation="MICRIWHGFTTFENADGYESMLRQDVLPGIGKVKGYKGAQVLRR
                     EHETETEFITMTYFEDIYAVVEFAGEDYTKAVIHAEAGKLLSHYDERSGHYELVDMVM
                     PDFLSLNKT"
     gene            complement(3760..4164)
                     /locus_tag="VEV83_04025"
     CDS             complement(3760..4164)
                     /locus_tag="VEV83_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK44310.1"
                     /translation="MRKTIVVALVFFALISVAAKQPPQTSKQRGNELYKKYCLTCHQA
                     NGTGVPRMNPPLIKTTYVTGDKKKLIKWVLQGSVQNIPIDGRTYSNNMPAQAYLTDQE
                     IADVLTYVRSSFGNKATPVTAAEVKTVRASIP"
     gene            complement(4168..5430)
                     /locus_tag="VEV83_04030"
     CDS             complement(4168..5430)
                     /locus_tag="VEV83_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYK44311.1"
                     /translation="MKRCFIWLGIFHFAVFAGIAQGPKPDANNAGLKLPAGFVALKVA
                     DGLGAARHLAVAPNGDIFVKLEGLKSGKSIYWLHDANKDGRAEQKTGFAKYIGTGMYI
                     KGNYLYASSNTDIYRYKLDDSFRPDTAHPEKIVTGLLARHQHESKSIVLDNEGNLYTN
                     IGAYSNACQEQDRTKGSPSLNPCPILDSAGGIWQFKADKPDQTYGDGVRYATGLRNVV
                     GLDWNTQTNSLFVMQHGRDQLGDLFPDLYTTQQSAELPAECMYELHKGSNCGWPYIYY
                     DQIEHKKILAPEYGGDGKKEGGQDAQDPVVAFPGHMAPNGLLFYTGDMFPEKYKNGAF
                     IAFHGSWNRAPEPQKGFFVVFVPFQDGKPNGDWEIFADGFSGKSTVVSPGDAAHRPCG
                     LAQGPDGSLYVSDDVKGTIYRIMYTGKK"
     gene            complement(5540..5884)
                     /locus_tag="VEV83_04035"
     CDS             complement(5540..5884)
                     /locus_tag="VEV83_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015266947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44312.1"
                     /translation="MNEVEIKFDDMKTLSECIDKAAAHGYIEQFSVDENGLRNFDGSK
                     HYLPDEVKITNFSRFEGNSDPEDNSILYMLATNDGTKGLLVDAYGVYSDQKIGAFIVQ
                     VAELHEQDGGSE"
     gene            complement(5918..7006)
                     /locus_tag="VEV83_04040"
     CDS             complement(5918..7006)
                     /locus_tag="VEV83_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HYK44313.1"
                     /translation="MVDIEISHDEFVEITRNYSLAAEKVNLVYVSDKDQGITRMKKGK
                     GYCYYFKNAVVRQNDQLERIRKLVIPPAWRNVWICIYENGHLQATGYDSLNRKQYRYH
                     ALWNSLRNETKFHRMYEFGKRLPELRARVEEDMQLKTLSDKKVLATVISVMERTYIRS
                     GNAEYEKLHGSYGITTLKDKHVKIDGNKVLFAFTGKRGVSHNITIKNKRLAKAVKDCR
                     EIPGKELFQYYNENGERKPIDSSMLNAYIKEATGSDFTAKDFRTWAGSLTMLRCLKCL
                     EKATTDAQRKSNIVAALNEVSKKLGNTRTVCKKYYVHPGIIDLYEKDEIEKYLEELDG
                     IEEPDNKTGLTKDETILMDILTKLVNAA"
     gene            complement(7023..7364)
                     /locus_tag="VEV83_04045"
     CDS             complement(7023..7364)
                     /locus_tag="VEV83_04045"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44314.1"
                     /translation="MKKVLIIDDEIDLCILLKNYLTRHHYQVETSHQLAKGLEKALSF
                     RPDIIFLDNNLPDSEGWTKAEWLLNLLPEADIYLISAYKTVPSIPENARLKIIEKPLS
                     LKSIEQLISRP"
     gene            complement(7551..8975)
                     /locus_tag="VEV83_04050"
     CDS             complement(7551..8975)
                     /locus_tag="VEV83_04050"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HYK44315.1"
                     /translation="MNLSAGILSAALATLIVLSIIFYNRFSSFVKFSEQTAHTYSVID
                     QIERAESILKDVETGTRGFIITRDTSFLRPLFNARALLKPAFDSLKDLVADNSDQVND
                     FNQLQHLAFLKLNLSESARTFSMFNDLQKDSLYIAMVYSKQVMDQFRSIAKHMVNRET
                     DLLAFRKKQMEYFRNRVPGNFTVIFVSALVTSLAFGIWTFVELRKRIMYQSSLEEHIV
                     QLNQNNAELEQIAFAASHDLQEPIRKIRIFSERLKSATPEEFRESAPGVIEKINRFAV
                     RLHGLIADLSNLIDAVRTRPESQVVSLSDIVEDVEKQFDEQIAKTGCKIIHSDLPPVE
                     GSPEQLKTIFANLLSNSLHFASPDRKPVIIIAADVVGGNEITGLPKQLSSKTYHHIKF
                     QDNGIGFDQHFRDKLFMPFQRLHNDTKNEMKRKGMGLAICKRIMVNLGGWIDAEGHEN
                     KGTALHLYFPLGAVERASDADEKV"
BASE COUNT         2462 a         2066 c         1929 g         2660 t
ORIGIN      
        1 tggtatcacg atcatgccat ggggatcacg cgactaaatg tttacgccgg actggccggt
       61 ttttatgtac ttaccgatga ccacgaacta caattaaaag cagcacacaa attacctgcg
      121 gatgaatacg acattggttt agcaatacag gacaggatgt ttacaacaga tggtcaatta
      181 tattatccgg ccgatctgga ggaacagggg cagatctcgc cgagcatcat acctgaattc
      241 tttggcaact ttattttagt gaatggcaaa gcatggccgg tattgaatgt agagccacgc
      301 caatatcgtt ttcgcattct taatggatcg gatagcaggt tctataattt attcttatca
      361 ggaaataaaa ccttctggca aatcggaagt gaccagggat tgcttactgc acccgtttta
      421 atgaatcaaa tgctaattgg cccagggcag cgcaaagaag tgatcatcga tttttccgac
      481 cctgcattat gggggcaaac gatcatcgtt cagaataatg cgaagtcacc ttatcgcaaa
      541 ggagagaccg ttgatccaaa caccacggga aagatcatgg cattccggat agacaaaccg
      601 ctcaatacaa atattgccgt gagtgtccta cccgcaaaat atcattctcc tatagctcca
      661 ttagttcaaa atgggccgac cagaaaactt atcctgggtg aattcaacga tgacctcgga
      721 agaattgaac caatgctggg cacagtagat ggcggcgcga tggattttga tgaaccggta
      781 acagagaaca taaaattgaa cgacacggaa atatgggaga tctataatac cactgttgat
      841 gcgcatccta tccatttaca tcttgtaaaa ttccaggcga tcagccggca aaaatttact
      901 gccactactg atccgctcac aggaaaattg accaacattc aactacttgg caagccggag
      961 ttaagcaacg tagacgagga gggctggctg gatacgaaag ttatgtttcc cggcgaagtc
     1021 acgcgcataa tagcaaagtt tgaccgtacc ggtaaatatg tgtggcattg tcatatcctc
     1081 agtcatgagg atcacgatat gatgcggccg tttattgtaa ttgcccccgc gactacatcc
     1141 caaagtgccg tgcaggccgc atcaaaaaat aatcttagca tatttccaaa tccgctcgcg
     1201 tctattgcaa caatacaaat gacgctggct gagcaaggca gcgtcagtat caaaatttat
     1261 aacgcgcagg gcaccgaagt ggccaccgtt ttcagcggcg ataaagctgc cggtaagtat
     1321 agcattcctt tcaacgcagg caaactgtct gcaggtgtat acatctgccg gctagtaatt
     1381 aataatgagg tcttgcaaca gaaacttgtt attcagaaat aataaaaatt cgtatcaccc
     1441 attattttct aaaagccgcg ccaactttat gacgcggctt tttttgtggt cgactgtatc
     1501 ggtctgacgc ttttgaagcg tctgaccgat taaacagtct ttttgaagag tgagaacagc
     1561 ttgctttgaa tcgttatacc ggaaccacaa cgaagacctc ctcatgttcg gtcaccgttt
     1621 actcaactgc aacggccata tactaataag ggaaaaccag cgaatcaaat tatcttattt
     1681 tgggcgccag cgagttttgt atttttaatc ggcctgtgcg tctctttcag agaaattata
     1741 gcatgaaatt taagtttatt ataccgctac tctttctttc gggaaaactg cttgcaggtt
     1801 ataccgtgcg ggttgttgtc accggtcctg tgaataacag gactatctat atagcgggta
     1861 catttaacaa ctggaatcgt tgcggcacta attataagct tgcacctgcg ggtgataata
     1921 agcaacaaat tgttttaact aatattcccg gcggattggt cgaatataag tttacaaagg
     1981 gtggttggga aaatgtcgaa acgacaaata tcgccaccga aatacccaac aggagattcc
     2041 atttaaccag ggacacgaag agatgatagt ctgtttcata aaatgatttt ttaataatta
     2101 gaaatggtta aaagattttt ataaagatga accgcgttga agaacacatt ttggctcttt
     2161 gagcaggttg cggcggtaaa tgagcagaat gcatgaaacc ggccgagcgt gatctgtaga
     2221 gtgtgaaatc gatcgtcttt tcctgcatta tattaccttc agtgctcgca gtaacaaacc
     2281 gcaatcatgc tcatccaaaa cttttgggtc tttgctctta ccgcattaat gctgaatctc
     2341 acaccgggta atgacatgtt gttcgtaatt gcgcgcagta catcgcaggg aagtaaagct
     2401 ggcattgttt cttcgttggg aataatggcc ggatgcatgg tacacatctt cgctgcgatg
     2461 gccggtttgt ctgctgtcat cgccagttct tcgcttgctt ttgatatcat aaaatatatt
     2521 ggcgctgcgt atttgatcta tctcggtatt cgtgctgtac tcagcaaaaa acattcgctt
     2581 gaaataaaaa gcccggtgaa aaaattatcc tacaagaaaa ttttctggca aggctttttt
     2641 acaaatgtgc tcaatccaaa ggtcgctttg ttctttctcg cgtttcttcc gcagtttatt
     2701 gacatcacaa aagaaaacac aggctggcaa attttatttt taggtacttg gttcgacgta
     2761 ggcggcacgt tggtaaatat cgtcgtggct ttgttgtttg gcaaggttgg acagtggctg
     2821 aacagatctg ctgcgtttgt gcaatggcaa caaaggatca ccggcacatt attaattgca
     2881 cttgggataa aggtggcgtt gagttcgagg aaatgagcct aatagaaata aaaagcagtt
     2941 tcatatttcg aacgagcgaa aaatacttta ttcttttgcg ccgttcatgc gactgagaaa
     3001 tctcggtaaa tccaaattaa caagctcggc gtagagattt ctccttgcgt cgaaatgacg
     3061 gtgcatgatg gttcaatcaa gatttctcct ggcgtcgaaa tgagtgcatc atgttttcaa
     3121 aagagagttc gtccggagtt gcaacagttg caccaatatt gccgacctta caggaactct
     3181 gcacctgtga ggtcttgtta aagttcaaaa aaatcaggca tggccagaaa aaacgacatc
     3241 atagtagtgc gagttcgtca atcaagattt ccaccaggcg tcgaaatgac ggtgcatgat
     3301 gttttcagca cagaattcgt cggcgcagtc ccatacagtc gcaccgtaac tccagacctt
     3361 acaggagctt cccacctgtc aggtcttgtt taagctcaag aaatccggca tcaccatatc
     3421 aacaagttca taatgccctg aacgttcatc gtagtgcgag agtaactttc cggcttcagc
     3481 gtgtataacg gctttcgtat aatcctctcc ggcaaattca acgaccgcat aaatatcttc
     3541 gaaatacgtc attgtaataa attccgtttc tgtttcatgt tctctcctta aaacctgtgc
     3601 gcctttgtaa ccctttactt tgcctattcc tggcaacaca tcttgtctta acatgctttc
     3661 atagccatca gcattttcga aagttgtaaa cccgtgccat attctacaga tcataaagta
     3721 ttttaagtga agaaaaaact ttgaggcaac tattgatctt tatggaatcg acgccctaac
     3781 cgttttcacc tcggcagccg tcaccggcgt cgccttattg ccaaaactgc tccgcacata
     3841 tgtaagcaca tctgcaattt cctggtccgt taaataagct tgcgccggca tattgttgga
     3901 atatgttcgg ccatcgattg ggatgttttg aacggatccc tgtagcaccc attttatcaa
     3961 tttcttcttg tcgccggtta catacgtcgt ttttatcaag ggtggattca tgcgcggcac
     4021 accagtgcca ttagcctggt gacacgtaag acaatatttt ttgtataatt catttccgcg
     4081 ttgttttgaa gtctgtggtg gttgtttggc agcgacggaa atcaaagcga agaataccag
     4141 ggctacaaca atagttttcc gcatgaatta ttttttgcct gtgtacatga tacggtagat
     4201 cgttcctttt acatcatcgc tcacatataa tgagccatct ggtccctgcg caagaccgca
     4261 tgggcggtgt gcagcatctc ccggcgaaac taccgttgac tttcctgaaa atccgtccgc
     4321 aaaaatttcc cagtcgccgt ttggctttcc gtcttgaaaa ggaacgaaca cgacgaaaaa
     4381 ccctttctgc ggttcgggcg ccctgttcca tgaaccatga aaggcgatga aggcgccatt
     4441 tttatatttt tcagggaaca tatcaccggt gtaaaatagt aagccgtttg gtgccatatg
     4501 gcccggaaaa gcaacaacag gatcttgtgc atcttgccca ccctcttttt tcccatcccc
     4561 tccatattcg ggagccaata tttttttgtg ctctatctga tcataataga tgtatggcca
     4621 tccgcaattg cttcccttat gaagttcata catacattct gcaggtaatt cagcgctttg
     4681 ttgtgtagta tacaagtctg gaaaaagatc cccgagctgg tcgcgcccat gctgcattac
     4741 aaacaacgaa ttggtttgcg tgttccagtc caatccaact acgtttctta gaccggttgc
     4801 atagcgcact ccgtcgccat acgtttgatc cggcttatcg gctttaaact gccagatacc
     4861 accggcagaa tcaagaatag gacaaggatt cagtgatggg gaacccttcg ttcggtcctg
     4921 ctcctggcag gcgtttgaat aagcgccaat atttgtataa aggttcccct cattgtcaag
     4981 tacgatggat tttgattcgt gctgatgacg ggccagtaag ccggtcacga tcttctcggg
     5041 atgggcagta tcaggcctga agctatcatc cagtttgtaa cgataaatat ctgtgttaga
     5101 agaagcatag agataattgc cttttatata catgcccgtt ccaatatatt ttgcgaaccc
     5161 tgtcttctgt tcggcacggc cgtctttgtt tgcatcatgc agccaatata tgcttttgcc
     5221 actcttcagg ccttcgagct tgacaaaaat atctccattc ggagcaacag caagatgacg
     5281 cgctgcaccg agaccatccg ccactttcaa tgcaacaaaa ccggcaggca attttaagcc
     5341 tgcgttattt gcatccggct ttgggccttg cgcaattccc gcaaagactg cgaaatgaaa
     5401 aatacccaac caaataaaac atcgtttcat gatagccttt tcaatgttct aaaaataaaa
     5461 agttcggcaa tttatcaaat gttgccaacg gatgaaagta tgtattgcac gttgaacgga
     5521 tgtgggtgag gaaacccagt cactcactcc caccatcttg ttcatgcaac tccgcgacct
     5581 ggactatgaa cgcgccaatt ttttgatcgg agtatacacc ataagcatca accaataatc
     5641 cttttgtgcc gtcatttgtt gctaacatgt acaaaatgga attgtcctcc ggatccgaat
     5701 taccttcgaa cctggaaaaa tttgtgatct tcacttcgtc gggtaagtaa tgcttgctgc
     5761 cgtcaaaatt tcgcaggcca ttttcgtcaa cggagaactg ttcaatgtag ccatgcgccg
     5821 ctgccttgtc gatgcactcc gacaaagtct tcatgtcatc gaattttatt tcaacttcat
     5881 tcatgattta attttgctaa agttatgaat tgaaatttca ggcggcattt acaagctttg
     5941 tgagaatatc catcaatatc gtttcgtctt ttgttagccc agtcttgtta tcaggctctt
     6001 caattccatc aagctcttca aggtattttt caatctcatc cttttcatac agatcgataa
     6061 tacccgggtg aacataatat ttcttgcaga ctgtcctggt gttgccgagc ttcttgctta
     6121 cctcgtttag cgccgcaacg atattcgatt tccgctgagc atcggtggtt gctttttcaa
     6181 ggcatttcaa acatctcagc attgttaaag aaccggccca tgttcggaag tcttttgccg
     6241 taaaatctga accggtcgct tctttaatat aggcgttcag catactcgaa tcgatcggct
     6301 tacgttctcc attttcgtta tagtactgga ataattcttt tcccgggatc tcccggcagt
     6361 cttttacggc cttggcgagc cgtttgtttt taattgttat gttatgagaa acgccacgtt
     6421 tgccggtaaa ggcgaataaa accttgttac cgtcgatctt tacatgttta tctttcaagg
     6481 tcgtaatgcc atatgaacca tggagtttct catactcggc gttgcccgac cgtatataag
     6541 ttctttccat cacgctaatg actgtcgcca gcaccttttt atctgacagc gtcttcagct
     6601 gcatgtcttc ttctaccctc gcccgcaact caggtaacct ttttccaaac tcgtacatgc
     6661 ggtgaaactt tgtttcatta cgcagcgaat tccacagggc atggtagcgg tactgtttcc
     6721 ggttaaggct gtcgtagccg gtcgcctgca aatggccatt ttcataaatg catatccaga
     6781 cgtttctcca ggcgggggga atcacaagct ttcttatcct ttcgagctga tcattttgcc
     6841 tcacaaccgc atttttgaaa taatagcaat accctttccc tttcttcatg cgagtaatgc
     6901 cctggtcttt atcactcaca taaaccaggt ttactttctc agctgcgagt gaataattcc
     6961 ttgttatttc aacaaattcg tcatgcgaaa tttcaatatc taccatgtaa aaaagggtta
     7021 tgctaaggtc ttgagatgag ttgctcaatt gacttaagag acaatggctt ttcaattatt
     7081 ttcaaccggg cattttcagg gattgacgga actgtcttgt aggcgcttat caagtatatg
     7141 tccgcctcag gtaataggtt taacaaccat tcagccttcg tccaaccttc ggaatcggga
     7201 aggttgttat caagaaatat gatatccggc cgaaagctta aagccttttc caatcccttc
     7261 gccagttgat gggatgtttc aacctggtaa tggtgcctgg taaggtaatt cttaagcagt
     7321 atgcacaaat ctatctcgtc atctataatg agaactttct tcacccactg gatattttcg
     7381 tttatacatt aaaaaatgtg cctgataatc aaatacaatg aaaaacaaga aaattgaacc
     7441 gaaaccggca gaaacgtctt tacctggcac ttcgcgcgct tgttcatgca acatgcgggc
     7501 caccgcttcc tccaggaagg agcacgctct gggtattttt ttgaccacaa tcatactttc
     7561 tcgtccgcgt ctgacgcccg ttcaacggct cccaaaggaa aataaaggtg caaagctgtt
     7621 cctttattct cgtgtccttc cgcgtctatc cacccgccaa gattcaccat aatgcgcttg
     7681 catatagcaa ggcccatgcc cttccgcttc atctcattct tggtgtcgtt atgcaggcgc
     7741 tgaaagggca taaataactt gtcgcgaaag tgttgatcga agccaatgcc gttgtcctgg
     7801 aattttatat gatgataggt ttttgaactt agctgttttg gcaggccggt gatctcatta
     7861 ccgcctacga catccgcagc aatgatgatc accggtttgc ggtccggaga tgcaaagtgc
     7921 agtgagttgg aaagcaagtt cgcaaagatc gttttcaatt gttcgggaga accttctacc
     7981 ggcggcagat cactatgaat tattttacaa ccggtctttg cgatttgttc atcaaattgt
     8041 ttttcgacat cttcgactat atcagaaagc gaaacgacct ggctttcggg gcgcgtcctc
     8101 accgcatcaa taagattcga aaggtcggcg ataagaccgt gaagccgcac cgcaaaccgg
     8161 tttatttttt caatgacgcc gggcgcagat tcgcgaaatt cctcgggggt tgcgctcttt
     8221 agacgctctg agaatattct tatttttctg ataggttcct gcaagtcgtg cgaagcggca
     8281 aaggcgatct gttcgagctc tgcgttgttt tgattaagct gaacgatatg ttcctccagg
     8341 gacgattgat acatgatccg tttacgcaat tcaacaaacg tccaaatacc gaatgccaac
     8401 gacgttacga gcgctgatac aaaaataacc gtgaaattgc cgggcactct gttcctgaaa
     8461 tattccatct gtttctttct gaaagcgagc aaatccgttt cccggttaac catatgtttt
     8521 gcgatgcttc gaaattgatc catcacttgt ttgctataga ccattgcaat gtacaagctg
     8581 tccttttgaa ggtcgttgaa cattgagaat gtccttgcgg attcagacaa gtttaatttc
     8641 aaaaaagcaa gatgctgcag ttgattgaaa tcattcacct ggtcagagtt atcagcgaca
     8701 aggtctttta aggaatcaaa cgctggtttt aataacgccc ttgcattaaa caaaggccgc
     8761 aaaaaacttg tgtctcttgt aatgatgaaa ccgcgggttc cggtttccac atcttttaat
     8821 atggattcag ctctttcgat ctgatcgatg acgctgtaag tatgcgctgt ttgctcgcta
     8881 aatttcacaa acgagctaaa gcgattataa aaaattatgg acaagactat caaggtggca
     8941 agcgcagcac ttaaaatacc cgccgataag ttcaagacgt tcgaaaactt tttaaaaagg
     9001 ttcatttgtg gagaaaaatc tacgttatta tctgcgtatc tttattcggc cagtcaaaag
     9061 ttcgtttcag gagttacaca aaattggtct cttacttgca tattgtgtta actgaaa
//
LOCUS       DASQJI010000135         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1547412,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000135 DASQJI010000000
VERSION     DASQJI010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547412"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1435
                     /locus_tag="VEV83_04055"
     CDS             122..1435
                     /locus_tag="VEV83_04055"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK44316.1"
                     /translation="MKKIFLAAAFASTALFTSAQIGNVLKHAKDKAASTANNKANSTV
                     DNTVDKTVNGTDTNDPNSTSTNQNTPANNTTQSNANNTADTAGQHSQANSAPVSIKAY
                     SKYDFVPGEKIVVLEDFMQDAIGDFPDKWNTNSSGEIVTIDKNQGHWLMMPRTGVFMP
                     EFIDSLPDNFTFEYDLFCIHGNKLGGWGTFQTAICELSNREKIQEWQFADNNYYFSVY
                     GGNASDATISYARKKEGNSEGGVQITTHQLADKSKPCHVSLWRQKERLRVYFNEEKVL
                     DIPKALTPGANYNSIIYVQPDADEENYYAISNLRLAVGAPDTRNKMLTENKWVTHGIL
                     FDVNSANIKPESYGTLKEMANVLKENPDLKVKIIGHTDADGSDAANLDLSKRRAAAVK
                     DELTTDFGIDASRMQADGKGESEPIDKSDTPAGKANNRRVEFIKL"
     gene            1632..>1829
                     /locus_tag="VEV83_04060"
     CDS             1632..>1829
                     /locus_tag="VEV83_04060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44317.1"
                     /translation="MKRNKLLLSSVTLLLFITTAFRQDQKPNLADGKRWSGTVKWMRK
                     TQGGHTVFFEWRMEATIEDGVC"
BASE COUNT          578 a          380 c          427 g          444 t
ORIGIN      
        1 attcacaatt gacaattcac cattcacaat cataactttc gttctattgc ccatcgcaca
       61 tcatcttctt aatttcaagt ctaattacat tacaggagga ccatgtaaaa aatctgtctt
      121 tatgaaaaaa atatttttag ccgctgcttt cgccagtact gctctgttta cgtctgcgca
      181 aattggtaat gtattaaagc atgcaaagga taaggctgca tcgaccgcga ataataaagc
      241 gaatagcacg gttgataata cggtggacaa gacggtaaat gggacggaca cgaacgatcc
      301 aaatagtact agcaccaatc agaatactcc ggcaaataat accacgcaga gtaatgcgaa
      361 caataccgcc gatacagccg gccaacattc acaggcaaat tcagcacctg tttcgataaa
      421 agcatacagc aaatacgatt ttgtgccggg agaaaaaatt gtagtgctgg aagatttcat
      481 gcaggatgcc attggcgatt ttcccgataa atggaatacc aattcatcag gtgagatagt
      541 aacgattgat aagaaccagg gacattggct catgatgcca cgaaccgggg ttttcatgcc
      601 ggagtttatt gactcgttgc ctgacaattt cacgtttgag tatgacttgt tttgcataca
      661 tgggaataaa ctcggaggat ggggcacttt ccagacggca atttgcgagc tatccaaccg
      721 ggaaaaaatt caggaatggc aatttgcaga caacaattat tacttctcgg tttatggcgg
      781 aaacgcaagc gacgctacca tcagttatgc gcgcaaaaag gaaggcaatt ctgaaggagg
      841 ggtccagata acaactcatc agctagctga taaaagcaaa ccttgtcatg tttctctgtg
      901 gcgccaaaaa gaacggttgc gggtgtattt caacgaggaa aaagtcctgg atattcccaa
      961 agcgctgacg cctggtgcaa attataatag catcatttac gttcaaccgg atgctgatga
     1021 agagaactat tatgcaatca gcaatctgcg cctcgcggtt ggagcaccgg atacccgtaa
     1081 taaaatgctc actgaaaaca aatgggtcac tcatggaatt ttattcgatg taaacagtgc
     1141 gaacatcaaa cccgaatctt acgggaccct gaaagaaatg gcgaacgtgc tgaaagaaaa
     1201 tcctgacctg aaagtgaaga tcattggcca cacagatgct gatggcagcg atgcagcgaa
     1261 ccttgatctt tccaaacgaa gggccgccgc tgtaaaagat gaattaacga ctgactttgg
     1321 tatcgacgca agccgcatgc aggccgacgg caaaggtgag agcgagccaa tagataaaag
     1381 cgatacgccc gccggtaagg ccaacaatag gagggtggag ttcatcaagc tctagtgaaa
     1441 tgctgctata aattatgtca tgcgaaccat atctactgct cttaaagtgc gcgttcgtgt
     1501 gttagcttat tctttgtcaa gagagctatt tgcaggcaat gatcgtagat aaaaattctg
     1561 gtttgagcgg ttgttatgaa aaatattcag gagttcgcat cgacaggatg cataaatcac
     1621 aaattatctc aatgaaaaga aacaaactgc ttttgagctc agttacactg ctgcttttta
     1681 ttacaacggc atttcggcag gatcaaaaac caaaccttgc ggacggtaag cgatggagtg
     1741 gtaccgtgaa gtggatgagg aaaacccagg gcggtcatac ggtctttttc gaatggcgaa
     1801 tggaagcaac catcgaggac ggtgtttgc
//
LOCUS       DASQJI010000136         2668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2929562,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000136 DASQJI010000000
VERSION     DASQJI010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2929562"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VEV83_04065"
     CDS             complement(<1..321)
                     /locus_tag="VEV83_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK44318.1"
                     /translation="MNITLSANCRTHRIAVSVFFFVAGITVSSWASRIPDIKEKLQLS
                     EAALGGVLFALPVGQLVSLPLSGWLISRFGSRQLVTAAAILSPLTPNLLGCATAIWQL
                     IAVLF"
     gene            complement(455..949)
                     /locus_tag="VEV83_04070"
     CDS             complement(455..949)
                     /locus_tag="VEV83_04070"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF003559.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008929 - methylglyoxal synthase activity
                     [Evidence IEA];
                     GO_process: GO:0019242 - methylglyoxal biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HYK44319.1"
                     /translation="MNTRTIKAVKNVVFVMNENNKTELIEWSYFNRELLLPHTITATA
                     AAGKILEGTLNKPVNKLVSGPRGEYKQIADMINEGKVDVIVFFGAGSETLFRTNEFEA
                     LIATARENNIIIALSRSTADFVFTSLHMNKDYSIEPPVSENQKKELPLSKERLQDCEA
                     VKAA"
     gene            complement(1271..2032)
                     /locus_tag="VEV83_04075"
     CDS             complement(1271..2032)
                     /locus_tag="VEV83_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HYK44320.1"
                     /translation="MKTSLSTRRQFVKNASAVVGFLSLPDLLNAKNKRQAENKKIVCV
                     GGHPDDPESGCGGTLSKLASAGHDVTIIYLTTGEAGIEGKTHDEAAAIRKQESINACK
                     IINAKPVFAGQIDGDTIVNNESVDKMHQLITAEQPGIVFTHWPVDSHKDHQCASLLSM
                     RSWMRNEGRWPLYFFEVCAGQQTMSFHPTDYVDITEVQEQKRKAVYCHISQDPAGIYD
                     CGHASMEDFRGRELGVKAAEAFFRVNGRSMGGFNI"
     gene            2215..>2668
                     /locus_tag="VEV83_04080"
     CDS             2215..>2668
                     /locus_tag="VEV83_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44321.1"
                     /translation="MKNLFLCFLLIAACKEVKKNKPLPLMSQEEIQKRQPVEYNLYRL
                     IRQPPDSIEQHFGKPNKIIRHPKDCAHLPYCTEMDYKNGLITVLYKDNKALWFEFDSL
                     HNHVWEFLPAIFALPDSAPSQVNDDVAMYRHVFPALEDVTFVRSKNHYD"
BASE COUNT          745 a          565 c          526 g          832 t
ORIGIN      
        1 gaacaagaca gcgatcaact gccatattgc tgttgcacat ccgagcagat tcggcgtcag
       61 cggagaaagt attgccgcgg cagtaacaag ttgcctgctt ccaaacctcg aaattaacca
      121 gcctgaaagt ggaagactca cgagttgtcc aacgggtagc gcaaacaaga ctccgccaag
      181 cgcagcttcg ctgagttgca atttttcttt gatgtccggt atcctgctgg cccaacttga
      241 aacggtgata ccagcgacga agaaaaaaac actcactgcg attcggtggg tcctgcagtt
      301 tgcagagaga gttatattca taaaaaaata tttcattatt cgaaccgcat aggcacaata
      361 gacacatagg ctttgcatcc ctctatgtgt ttctgttatg tcctatctgc ctgcgtggtt
      421 ccggttacta aattttgtat aatcatttga agtcctaagc agcttttacc gcttcacaat
      481 cttgcagtct ctccttagat agtggtaatt cttttttttg attttctgaa acaggaggtt
      541 caattgaata atctttattc atgtggagag aagtgaacac aaagtcggca gtacttctgc
      601 tcaatgctat gatgatatta ttttcgcgcg cggttgcgat caacgcttca aattcattag
      661 tacgaaaaag tgtttcgctg cctgctccga agaaaacgat cacatcaacc ttgccttcgt
      721 tgatcatatc tgcaatttgt ttgtattcgc cacgaggacc gcttactaat ttgtttacag
      781 gcttgttcaa tgttccttct aatattttac cggctgcagc ggtcgctgtt attgtatgcg
      841 gtaataaaag ttccctgttg aaataagacc attctatcaa ctctgttttg ttattttcat
      901 tcataacaaa tacgacgttc tttacagctt taattgttct tgtattcatt gttttgtatt
      961 tatagtttac acctcttccg tcttgcggat cagttgaggt ggcaataaat cgtttgctaa
     1021 aaaaaatctt gatgggatta gattatattg gtatcaccat caattactga agtgctcagt
     1081 ctacatcagc acgggtttca attctgtgta gatattcaaa atacttgcca atagtgtaat
     1141 tgttacacat taattccatc tggccttaaa aagtaacctg ttaaattgaa tttataaacg
     1201 aatgatagtt agtattgatt gaataaggca ttgcttttca gcagcagttg catgaggaag
     1261 cggagctaga tcaaatgttg aacccgccca tacttctgcc atttacccgg aagaaagctt
     1321 ctgctgcctt cacccccaat tctcttccgc gaaagtcttc catagatgca tggccacaat
     1381 cataaatacc tgcagggtcc tggcttatgt gacaataaac cgcttttcgt ttttgttcct
     1441 gcacctcggt gatatcaaca taatcggtcg gatgaaagct catcgtttgc tggccggcac
     1501 atacttcaaa aaaatagagg ggccagcgac cctcgttccg catccatgaa cgcattgaaa
     1561 gtaaactcgc gcactggtgg tctttgtgtg aatcaacagg ccagtgtgtg aaaacgatac
     1621 caggttgttc agcagtaatg agctgatgca ttttatcaac cgattcattg ttgacgatcg
     1681 tatctccgtc gatctgtccc gcgaataccg gttttgcgtt tatgatcttg caggcgttga
     1741 tcgattcctg tttacggatc gcagctgctt catcatgtgt tttaccttcg attcctgctt
     1801 cgccggtggt caaataaata atagttacgt catgccctgc acttgcaagt tttgagagcg
     1861 taccaccaca accactttcc ggatcatcag gatgaccgcc cacacaaaca atctttttgt
     1921 tttcggcttg tcgtttgttt ttcgcattca acagatcagg taaagacaag aagccaacaa
     1981 ctgctgatgc attttttaca aactggcgac gagttgataa agatgtcttc ataataaagt
     2041 tttgcatcgc gaatgtagtg agttggcatt gttttgaaaa ccaacaattc agaaaatcgg
     2101 tgttttgttt cttttattcc tattcaaatt tctttgaagt gtagacgaga cattcaacat
     2161 tcaatagcgt attgcaaacc cgtctgcgca acgtatcttt ctaaaaactt cgtcatgaaa
     2221 aacctattcc tttgtttttt attaattgca gcatgtaaag aagttaaaaa aaataagcct
     2281 ttaccattga tgtcacaaga ggaaattcaa aaaagacaac cggttgaata taatctgtat
     2341 cgactgataa gacagccgcc agactcaatt gaacagcatt tcgggaagcc caacaaaatt
     2401 attcggcatc caaaagattg tgctcatctt ccatattgca ctgaaatgga ttataagaat
     2461 ggactgatca ctgttttgta caaggacaat aaggccttgt ggtttgaatt tgacagttta
     2521 cacaatcacg tatgggaatt cttgcctgca atttttgcat tgccagatag cgctccttcg
     2581 caggttaacg acgatgtagc tatgtataga cacgtatttc ccgcgttaga agatgtcact
     2641 tttgttagat ccaaaaatca ttacgata
//
LOCUS       DASQJI010000137         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1855373,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000137 DASQJI010000000
VERSION     DASQJI010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1855373"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VEV83_04085"
     CDS             <1..454
                     /locus_tag="VEV83_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44322.1"
                     /translation="ASAFLNDETYKTKAFVEVDNFYPWLLQNGFQSSFSLSKSGSTYQ
                     TLSENDYDQIAYGIEPMFAAAAEAYNETLDDRYADIAGHIAAWLLGANDPAMNMYDTA
                     TGRCFDAIFSATGVNRNSGAESTIEALLTLQKVEEVPAIKRALDKYKK"
     gene            620..>1591
                     /locus_tag="VEV83_04090"
     CDS             620..>1591
                     /locus_tag="VEV83_04090"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44323.1"
                     /translation="MKNSFIKSDHLIFTPDDVDLSFSPLRKSLKESTYVLGAFNPGLC
                     RLPNGNLLMMVRVAEALSDPVVNKKVHSIRWDEENGFVTDEWPLEKVNMLDPRKFRIN
                     DYAFPVFALTSLSWLLPVELNEDGSSVKQVHYDKIIAPELTSQEYGIEDARISFIDSR
                     YYMTTCCVSSERHSTMLYVSDDGLNYKNCGVVLDHQNKDMLLFEGKISNTYYALTRPM
                     GECYFASSPSSPFHPGAAIHLASSPDTLHWKPHDKPFLRGRRSTLSNVKIGGGTPPVL
                     TQDGWLILYHGVENNNDVGIYRTFWALLDKEDPSQIVRMEDSIPLLEA"
BASE COUNT          457 a          330 c          371 g          433 t
ORIGIN      
        1 cgcttctgca tttttgaatg acgaaactta taaaaccaaa gcatttgttg aagtggataa
       61 tttttatcca tggctactgc aaaacggatt tcagtcttcc ttttcgttgt cgaagagcgg
      121 tagcacctat caaacattat ctgaaaatga ttacgaccaa atagcgtacg gcatagagcc
      181 catgtttgcc gcagccgctg aagcatataa tgaaacgctc gatgatagat atgcagacat
      241 agccggtcat attgcggcgt ggctgttggg agcgaatgat cctgcgatga atatgtatga
      301 taccgccacc ggacgttgct ttgatgctat cttctccgca acgggcgtaa atcgtaattc
      361 tggtgctgag tcaactattg aggctttgct cacattacaa aaggtggaag aggtgccagc
      421 gataaagagg gctttggata aatataaaaa gtagtgatgt ttttaatgaa gggcgttctc
      481 gctggtttgc agactcggca cactgcgttg cagattgcca tacaacgttg cagattcccc
      541 gcacctcgga atgacaggag aaccgtgtca tgccgactaa cggacgcatc tgaaacgcat
      601 tctcaaacgg aatactcaaa tgaaaaatag ttttataaaa tctgaccatt taatatttac
      661 acccgatgat gtagacctgt ctttttcacc attaagaaaa agcttgaaag aatccactta
      721 tgttttaggc gctttcaatc ccggcctttg ccgtttaccg aatgggaatt tgctcatgat
      781 ggtccgcgtt gcagaagcat tatcagatcc ggttgtaaat aagaaagtcc attcaataag
      841 atgggatgaa gaaaatggat ttgttacgga cgaatggccg ttggaaaaag tcaatatgct
      901 tgacccgcga aaattcagaa tcaatgatta tgctttcccg gtgtttgcgt taacgtctct
      961 atcatggttg cttccggttg agttaaacga agacggcagc tcagtaaagc aggtccatta
     1021 tgataagata attgctcctg aactcaccag ccaggaatat gggatcgaag acgcgaggat
     1081 atcgtttatc gatagccgtt attatatgac cacgtgttgt gtaagctcgg aaaggcactc
     1141 aaccatgcta tatgtttccg atgatggatt gaactataag aattgcggtg ttgtgcttga
     1201 tcatcagaat aaggatatgc tcttgttcga agggaagatc agcaatactt attatgcttt
     1261 aacgaggccg atgggtgaat gttattttgc atcatcacca tcatcaccgt ttcatccagg
     1321 cgcagcgata catctcgcat catcacccga cacgttgcat tggaaaccac acgataaacc
     1381 atttttacgc ggacgccggt ccactttatc aaatgtaaaa attggcggtg gcacaccgcc
     1441 ggtcctaacg caagacggtt ggctaatatt atatcacggc gtagaaaata ataacgatgt
     1501 cggcatatac cgcacgttct gggcgttgtt ggataaggaa gatccgtcac agatcgttcg
     1561 catggaagat tcgataccgc tgctggaagc g
//
LOCUS       DASQJI010000138         4988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1394840,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000138 DASQJI010000000
VERSION     DASQJI010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4988
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394840"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VEV83_04095"
     CDS             <1..195
                     /locus_tag="VEV83_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44324.1"
                     /translation="QSLNQGMWALELLKNDSQERSAFIEQFIWAAKLSGKCLPCAKGE
                     AITGLDRRRHIRTIFQFLFL"
     gene            820..1272
                     /locus_tag="VEV83_04100"
     CDS             820..1272
                     /locus_tag="VEV83_04100"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HYK44325.1"
                     /translation="MIRSISTILLLMVFAASCNKPQSFEYRGMQNFKIDSVGLVNSKI
                     SLELLYFNPNNFGVELRNVTCDVYINHNYLGKYMLDTLMHIPKRAEFFVPSSMQVDMK
                     NVFKNAFGALLSNQVLVELKGTTRLGKAGIFITVPFTYSAMQTFSLFN"
     gene            complement(1269..1655)
                     /locus_tag="VEV83_04105"
     CDS             complement(1269..1655)
                     /locus_tag="VEV83_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HYK44326.1"
                     /translation="MNKAFLITAAIFGAISVMLGAFGAHALKNKMSADAFEIFETAIK
                     YQFYHVFALLAAGILAQAFPGGFITWSGRFFIAGILLFSGSLYLLSYFKASGNQQMNW
                     LGAITPFGGLSFITGWILLCIAIMKS"
     gene            complement(1648..2157)
                     /locus_tag="VEV83_04110"
     CDS             complement(1648..2157)
                     /locus_tag="VEV83_04110"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HYK44327.1"
                     /translation="MANKIFLIGLMGSGKSFWAAKIANALTIPFFDLDAEVERNEKQS
                     ITTIFETEGQDEFRRKEAEALRAFANYDAFILSTGGGTPCFNDNMQWMNEHGITIWLD
                     ESLDIIAERLKGERAHRPLVSRLHEGGVKEFLSDMLMNRRAFYEQAKFHLAGAEINEE
                     NFLKIIRNE"
     gene            complement(2164..2463)
                     /locus_tag="VEV83_04115"
     CDS             complement(2164..2463)
                     /locus_tag="VEV83_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44328.1"
                     /translation="MRVHRTLVFVLLFNLIAAFVFFVITVKFTNEYYLPLMQPFGWIF
                     WLGISSFLTPLFVSREKAFAWFQEKYFWSSFVLFALHIVFLVMIVQLIVLHYGVD"
     gene            complement(2472..3656)
                     /locus_tag="VEV83_04120"
     CDS             complement(2472..3656)
                     /locus_tag="VEV83_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYK44329.1"
                     /translation="MASRTDVFQSPDYYLLDELLSEEQKLVRESVRNYVKKEISPVIE
                     DYAQRAEFPEFIVKQLGDLGCFGPTIPHEYGGGGLDYISYGLMMQELERGDSGVRSTA
                     SVQGSLVMFPIYEYGSEDQRKKYLPKLASGEWLGCFGLTEPDFGSNPAGMLTNFKDDG
                     DHVILNGAKMWISNAPYAQVAVVWAKDEAGDIKGLIVERGMEGFSTPTTHGKWSLRAS
                     ATGELVFHDVRVPKENIFPNVKGLKGPLGCLTKARYGISWGALGAAMDCYDTALRYSK
                     ERIQFDRPIGGFQLQQKKLAEMITEITKAQLLVWRLGVLMSEGRATPAQVSMAKRNSC
                     EIAANIARDARAMLGGMGITSEYSIMRHMMNLESVLTYEGTHDVHLLITGMDVTGLNA
                     FK"
     gene            complement(3753..4163)
                     /locus_tag="VEV83_04125"
     CDS             complement(3753..4163)
                     /locus_tag="VEV83_04125"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44330.1"
                     /translation="MPHFKKVLLIDDDEITVTICDRLMKISMFATEVIACPDGQRATD
                     YLVQNVSSFPEIILVDLQMGVMNGWEFLKWFQKWSASLPGCPAVYVLSSSLSHEDVQR
                     SESYKCVKGFIVKPITVEHLNNIAAEVSGASPHE"
     gene            complement(4173..>4988)
                     /locus_tag="VEV83_04130"
     CDS             complement(4173..>4988)
                     /locus_tag="VEV83_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MutS2/Smr-associated SH3 domain-containing
                     protein"
                     /protein_id="HYK44331.1"
                     /translation="LGGAFAEVILDELNRKHALGVITTHYLNLKVMANHTPGILNGSM
                     VFDESHLQPLYKLTIGKPGSSYTFAIAERIGLAPHLIERAKKLVDEHHFQLDRLLNRT
                     EQDLQTINKERQELKTLIAENQKLKRQLSVDLDKEKHKQQVEVLKQQNKITEDRISYL
                     RDMERKLKQIVLEWKKSENKNEVVKQIQELLFKRKEHHIINKLAKKVESRYRELDAAI
                     CVGSKVKMKKNHQVGEVKEIRGKRAVVQIGVLPMNIDLNDLVAVEEKIGTPEK"
BASE COUNT         1366 a         1179 c          974 g         1469 t
ORIGIN      
        1 caatccctca atcaaggaat gtgggcgctc gagcttctta aaaatgacag ccaggagaga
       61 agtgctttta tcgaacaatt catatgggcc gcaaaattaa gcggtaagtg cttaccgtgc
      121 gccaaagggg aggccataac aggacttgac cggcgacgac acattagaac aatctttcaa
      181 tttctttttt tatgaactta aaaagtagtt ttacatactt atctgctgaa aattaactga
      241 ttgacgttta aagcacagcg gccatgaaaa gaaaacgtag tgtaatgcat ttcggatgtc
      301 ccgacgcgga ctgacgcaat atatatcata aatttaaaaa ttcaaattta gccataactc
      361 aatatatgtc caacagttgt gtataaagat tataaactaa tattactagc ctaatatctt
      421 tacccgtctt aagtcgattt actaaaactt ctaggcaggt aattttcaaa aaaagtacgc
      481 cgtcgttcgt ggccgcaaaa atttccgaaa aaaattagtg atctgccggc agcccggtga
      541 atcgtaaaag gaaattccgc acaacagccg cccgctattg gtttaatgtc tatatttggc
      601 tttttcgtgg gaaatatatc tctacaattg tagcccccgt ttctacaggg gcttttttct
      661 gatcggccga tcctaaccaa ttgctagcat ctggttttaa actttaggaa attcgtatca
      721 tctcttttgt caatatttga gaaaaaaagt cgggtttgcc gcgatggggg tttctgtttc
      781 aagacacgct ctccttccat gctttttact tttcgcaaaa tgatacgatc aataagcact
      841 attttattgt tgatggtttt cgccgccagc tgcaacaagc cgcagtcatt tgaatacagg
      901 ggaatgcaaa atttcaagat cgatagcgtc ggcctggtga acagcaagat cagcctcgag
      961 ctgctctatt tcaatccaaa caatttcgga gttgagttaa ggaatgtaac gtgcgatgtt
     1021 tacataaacc acaattatct tggtaagtat atgttggata cgttaatgca tattcccaaa
     1081 cgcgctgaat tcttcgttcc atcaagtatg caggttgata tgaaaaacgt atttaagaat
     1141 gcgtttggag cacttttgtc caaccaggtt ttggttgaat tgaaagggac aacaaggctt
     1201 ggaaaagcgg ggatctttat aacggttccg tttacctatt cagccatgca aacattcagc
     1261 ttgttcaact agcttttcat gatcgcaatg caaagaagga tccaacctgt gatgaagctc
     1321 aggccgccga atggtgtgat cgcacccagc cagttcatct gctgattgcc tgaagcttta
     1381 aaatatgaca acaagtaaag tgagccggaa aaaaggagaa taccagcaat gaaaaaccgg
     1441 ccgctccagg ttataaaacc tccgggaaac gcctgcgcta aaattccggc tgctaatagt
     1501 gcaaaaacgt gataaaattg gtatttgatt gctgtttcaa aaatttcaaa ggcgtctgct
     1561 gacattttgt tttttaaagc atgagcgccg aacgctccta acatcacgga gatcgctcca
     1621 aagattgctg ctgttattag aaaagcttta ttcatttcga atgattttca aaaaattttc
     1681 ttcgttgatt tcagctcctg cgagatgaaa tttcgcttgc tcataaaatg cgcgcctgtt
     1741 catcagcatg tctgaaagaa attcttttac tccgccctcg tggagtcgag aaaccagagg
     1801 acgatgtgct cgttctcctt tcagccgttc tgcaattata tcaagggact cgtcgagcca
     1861 gatggtgatc ccatgctcat tcatccattg catattgtca ttaaaacagg gcgtacctcc
     1921 tcccgtagaa agtatgaagg catcgtagtt tgcgaaagca cgcaatgcct cagcttcttt
     1981 ccgcctaaac tcatcctgtc cttccgtttc aaagatcgta gtaatcgatt gtttctcgtt
     2041 tctctctact tctgcatcca gatcaaagaa gggaatggtc aacgcgttgg caatttttgc
     2101 agcccaaaaa ctttttccgc ttcccatcag acctatcaaa aaaattttgt tggccatgtt
     2161 tgtttagtcg actccgtaat gtaggactat tagctgcacg atcattacca aaaaaactat
     2221 gtgcagcgcg aatagaacaa agctgctcca aaaatatttc tcctggaacc acgcaaacgc
     2281 tttttcccgg ctcacaaata aaggcgttag aaaagatgaa atgcctaacc aaaagatcca
     2341 gccgaacggt tgcatcagtg gcaaataata ttcgttggtg aacttaactg taattacaaa
     2401 gaaaacaaac gccgcaataa ggttgaatag cagaacaaaa actaatgttc tgtggactcg
     2461 catttactta tttatttaaa cgcatttaag cccgttacat ccatgcctgt tataagcaaa
     2521 tgcacatcat gcgtgccttc gtatgtgagt acgctttcga gattcatcat gtggcgcatg
     2581 atactgtact cgcttgtgat ccccatccca ccgagcattg cgcgcgcatc tcgtgcaatg
     2641 ttcgccgcga tttcacaact attgcgcttt gccatactaa cctgggccgg cgttgcacgg
     2701 ccttcgctca tcagaacgcc taaacgccaa accagcaatt gcgccttagt tatttccgtt
     2761 atcatttccg ccagcttttt ttgctgcagc tgaaatcctc caattggcct gtcgaactgg
     2821 atcctttctt tgctgtaacg caatgcggtg tcatagcaat ccatagcagc gcccaacgct
     2881 ccccatgaaa taccgtagcg cgctttggtt aaacaaccga gaggaccctt cagtcctttc
     2941 acgtttggaa aaatattttc tttaggaacc cgcacatcat gaaacactaa ctcgccggtc
     3001 gcactcgcgc gcaaactcca ttttccgtgg gtggtgggtg ttgaaaagcc ttccattccc
     3061 cgttcaacga ttaatccttt aatgtccccc gcttcgtctt ttgcccaaac cacagcgacc
     3121 tgcgcgtaag gcgcattgct gatccacatt tttgctccgt ttagtatcac atggtcacca
     3181 tcgtctttaa agtttgtcaa catcccggca gggttgctgc caaagtccgg ctccgttaac
     3241 ccaaaacatc caagccattc tcccgatgca agcttcggta agtatttttt cctctgatcc
     3301 tcgctcccat actcataaat tgggaacata accaggctac cctgcacgct cgcggttgag
     3361 cgaacgccgc tgtctccgcg ttccagttcc tgcatcatta atccatagct gatataatca
     3421 aggccaccgc caccgtattc atgcgggatg gtgggaccga agcatccgag atcaccaagt
     3481 tgcttaacga tgaactcagg aaattctgca cgctgcgcat agtcttcgat gactggcgag
     3541 atttcctttt tcacataatt gcgaacagat tcgcgaacca gtttttgctc ttcgctcaac
     3601 aattcgtcaa gtaaataata atccggcgat tgaaatacat cagtcctgga agccatcgtt
     3661 aattttttga atttgaagat atcgatcagc aacctgatca aaaaaaacgt cgcaaaggta
     3721 aagcgttgaa gattgcgtca aacttttttg tgtcattcat gcggcgaagc accggagact
     3781 tcggcagcga tgttatttaa atgctcaaca gttatcggtt taactatgaa acctttcaca
     3841 catttatacg attcagagcg ttgaacatct tcatgtgata aacttgatga cagtacgtac
     3901 actgccggac atccgggcaa tgaagctgac catttttgaa accatttaag aaattcccat
     3961 ccattcatta cacccatctg caggtccacc aaaataattt caggaaaaga cgaaacattt
     4021 tgtacgagat agtccgtggc gcgctgtccg tccgggcatg caatcacctc tgtagcgaac
     4081 atgctgatct tcattaaccg gtcacaaatt gtaacggtga tctcatcatc atctattagt
     4141 aatacctttt taaaatgtgg catgctttca cattattttt caggagtgcc gattttttct
     4201 tcaaccgcca ccaaatcgtt caaatcaatg ttcataggca aaaccccaat ttgtacaaca
     4261 gcacgcttgc cgcgaatctc tttgacctcg ccgacctggt gattcttttt catctttact
     4321 ttcgatccta cacagatagc agcatccagt tctctgtacc tcgattcaac cttctttgca
     4381 agtttgttta ttatatgatg ctcttttcgt ttgaagagca gttcctggat ctgttttaca
     4441 acctcatttt tattttcaga ttttttccat tccagcacaa tttgtttcaa ttttcgttcc
     4501 atgtcgcgta agtaggatat cctgtcctcc gtgatcttgt tttgttgctt caaaacctca
     4561 acctgctgct tgtgcttttc cttatccagg tccacagata actgcctttt caatttttga
     4621 ttttccgcga tcaaagtctt cagttcctgt ctttctttat taatggtttg cagatcctgc
     4681 tccgtgcgat ttaataaccg gtcaagttga aagtgatgtt cgtctactaa tttttttgca
     4741 cgctcgataa gatgtggcgc aaggccaata cgctctgcaa tagcaaacgt atatgaactt
     4801 cccggtttgc caatcgtgag tttgtataat ggttggagat gactctcatc gaacaccatc
     4861 gaaccattca atatgccggg tgtgtgattc gccatcactt tcaaattaag gtaatgcgtt
     4921 gtgatcacac ccaatgcatg cttccggttg agttcgtcaa ggatcacttc agcaaatgcg
     4981 cctccaag
//
LOCUS       DASQJI010000139        15042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_626404,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000139 DASQJI010000000
VERSION     DASQJI010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15042
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626404"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /locus_tag="VEV83_04135"
     CDS             <1..1065
                     /locus_tag="VEV83_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYK44332.1"
                     /translation="RDEKMIFPKDQIMKLGELGFLGMMVNPKYGGSGLDTVSYVIAME
                     EISKVDASTSVCMSVNNSLVCWGLEAFGTEDQKQKYLTPLAMGKKDNELHIGAFLLSE
                     PEAGSDATSQHTIAEDKGDHYLVNGTKNWITNGNSASVYLVMAQTDASKKARGINALI
                     IEKNWPGVSVGAKENKLGIRGSDTHSIQFSDVKVPKENRIGKDGFGFKFAMQVLSGGR
                     IGIAAQALGIASGAFERALRYSQERKAFGTPIINHQAIQFKLADMATRIEAARLLCFR
                     AAFDKDNRDDYTISSSMAKVFASETAMWVTTEAVQVHGGYGYVKEYHVERLMRDAKIT
                     QIYEGTSEVQRMVIGRSLAK"
     gene            1336..2109
                     /locus_tag="VEV83_04140"
     CDS             1336..2109
                     /locus_tag="VEV83_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HYK44333.1"
                     /translation="MNLQISRPLAIIDLETTGVNVSVDKIIEIAIVKLLPDGTTQLKR
                     KIINPQSPIPASSSDVHGITDEMVKNAPTFKQVANEIKQFLDNCDLGGYNSNRLDIPM
                     LIEEFLRVGLEFNTDGRRFIDVQKIFHMMEQRTLAAAYKFYCNKALEQAHSAQADALA
                     TLEILHAQIERYPQIGTTIETILNCVGEEDCVDFARRMVRIDGIEIFNFGKHKGKAVA
                     EVLRIEPQYYDWMMKGDFPMNTKQKLTEILNRTLIKKVN"
     gene            2186..2977
                     /locus_tag="VEV83_04145"
     CDS             2186..2977
                     /locus_tag="VEV83_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HYK44334.1"
                     /translation="MEKIVIIPTYNEIENIPLILDSIFANNDNYHVLVVDDSSPDGTA
                     TEVKRLMNRYAGKLFVEEREGKLGLGTAYIYGFKWAIRKGYEFIFEMDADFSHNPSDL
                     ERLYETCKFEGYDVAIGSRYVEGGKIENWPVDRHIYSKGGALYTRLITFMPVKDPTAG
                     FVCYRKQVLEAINFDEIKFIGYAFQIEMKFVAWKLGFKIKEVPIVFVDRKIGVSKMSK
                     RILSEGVLGVLAIQMKSLFKNYRRRMAAQPLAPKSYPASVLTESE"
     gene            3170..3436
                     /locus_tag="VEV83_04150"
     CDS             3170..3436
                     /locus_tag="VEV83_04150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44335.1"
                     /translation="MYSYALLEPGCYYLVQEKENEGLTLLQTKVVSDHCMYVEKYAES
                     VVQEWKRKTDPIFDIVELLSDDVVKEWTDLYYSNEDAYHEEDDE"
     gene            complement(3452..5005)
                     /locus_tag="VEV83_04155"
     CDS             complement(3452..5005)
                     /locus_tag="VEV83_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44336.1"
                     /translation="MAVATILWVDDEIENLQSQKLFLENKGYEVHTRANGFDAIDFVK
                     ENNLDIVLLDETMPGITGLETLQKIKEVSNIPVVMITKNETENLMEEAIGSQITDYLI
                     KPVNPNQVLLCLKKIIDNKRLVAERTTSAYQQQFRNLFMALNSSPDYNEWMDIYKKLV
                     YWELEMEKSNSPEMQEVFQTQKQEANTEFFKFISKNYLSWVNAKTTDAPVMSHNVFRH
                     KILPQIEKGTPTFFVLIDNLRLDQWKAIQPIFAESFRILEEETFYSILPTATQYSRNA
                     IFAGMLPVEIEKQFPNQWKNDDDEGSKNSYEEDFFRAQLKRLKRDDIKFSYTKVLHHN
                     DGQQLLNNIHNLLNNDLNIIVYNFVDMLSHARTEMEVLKELAGDEISYRSITRSWFEY
                     SPLHQALKKIADKKINLILATDHGSVRVNTPYKVIGDKQTTANLRYKHGRNLNYEARD
                     VLAFRDPRLGGLPVPNVNSSYIFAKEDGYLCYPNNYNYYVNYYRNTFQHGGISMEEMI
                     VPLIKMTSR"
     gene            5185..6396
                     /locus_tag="VEV83_04160"
     CDS             5185..6396
                     /locus_tag="VEV83_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HYK44337.1"
                     /translation="MEQTKRKIINDPIYGFITVDHPLLFFIIDHPWYQRLRRIYQMAL
                     AQLVYPGAVHTRLHHSLGAYHLISLAINELRNKGVDISKDEEIAAKAAILLHDIGHGP
                     FSHALENVLVPGIHHEHLGLEIMHEMNHESGSKLDMTISIFTDEYEKPFLHQLISGQL
                     DVDRMDYLTRDSFYTGVSEGVIGYDRILKMLAVVDGSLMIEEKGLYSVEKFLVARRQM
                     YWQVYLHKTVLAAEKMIVKIIERAREINACRSRSGQFYSTLDYFLEDFKGMDGSALAK
                     FCLLDDYDIMFAIKQWSNHDDQVLSILCRSLLNRKLFKSRLQTLPFDDEEVQLKRQEI
                     ARQFNVPIEEAAYFAFTGEAVNTTYQLADERINIVSKDGTIRDISQVDDPLIHKTLSM
                     PVKKFYICYLT"
     gene            6452..7504
                     /gene="lpxD"
                     /locus_tag="VEV83_04165"
     CDS             6452..7504
                     /gene="lpxD"
                     /locus_tag="VEV83_04165"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HYK44338.1"
                     /translation="MKINADRIALLIRGKVEGDGNATVNSFGKIEEAKPGQLAFLANP
                     KYEEFLYTTNASIIIVNDAQELKQPVPATLIRVPDAYLAFASLLQKYQAMIQEQLTGI
                     QQPSFIDPSACLGENVFVGAFTYIGENANIGNNVKLFPGVYIGNDTTIGDNSILHPGV
                     KIYFGCVIGKQVTIHAGTVVGGDGFGFAPQDDGTYQKVPQIGNVVIEDDVEIGSNSTI
                     DRATVGSTIIRAGTKLDNLIQIAHNVEVGNNTVIAAQAGISGSTKIGSNVMIGGQAGI
                     VGHLQLADGVKVNAQSGVSKSIKQKNTAVTGSPAYDYTSALRSQAISRNLPQLEKRLA
                     ELEKLVQQLMQEKVSF"
     gene            7662..9068
                     /locus_tag="VEV83_04170"
     CDS             7662..9068
                     /locus_tag="VEV83_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP
                     dehydratase"
                     /protein_id="HYK44339.1"
                     /translation="MDTNFNPDKQHTLSKAVTISGTGLHTGVLVDMRLNPAHPGFGVQ
                     FQRVDLPGSAPIKADCDLVTDTSRGTTLQVDDAKVSTVEHILAALVGMGVDNVLIEIN
                     GPEIPIMDGSSQPFLDLIEEAGVSEQEAAKAWYSLEENIYHYDEEKRVEMTAFPSTSY
                     QITTLIDFNSPVLGTQHAGLKNMRDFKDEIAPCRTFCFLHELEMLLDNNLIKGGDINN
                     AIVVVDKVVDAEEMKRLKKVFKKDRIEVKSEGYLNNLELRFPNEPARHKLLDVVGDLA
                     LIGYPIKARIIANRPGHSSNVEFARKIKQYIKKNKHVKDVPVYDPSQPPVYGHSYIEK
                     TLPHRFPFLLIDKIIELTDTRIVGIKNVTFNEWFFQGHFPSNPVMPGVLQVEALAQTG
                     GILCINAMPNGKYDTYFLKIDNCKFKQKVVPGDTMILKMELNGPIRRGICDMKGTVYV
                     GGKVATEADLVAQLVKVD"
     gene            9163..9960
                     /gene="lpxA"
                     /locus_tag="VEV83_04175"
     CDS             9163..9960
                     /gene="lpxA"
                     /locus_tag="VEV83_04175"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HYK44340.1"
                     /translation="MIHPHTYIHSNAKLAENVKIDPFTVIHEDVEVGAGTWIGSNVTI
                     MEGVHIGKNCRIFPGAVIGAVPQDLKYNGEKTSVEIGDNTTIREFVTIHRGTRDRWKT
                     TVGNSCLIMAYSHIAHDCSVGNNCIMSNNSQMAGHVVMSDYAWIAGFTAIHQFVKIGQ
                     HAFIAGGSLVRKDVPPFIKAVRNPLSYGGVNSVGLKRRGFSLDKINEILDIYRIIYNK
                     GLNTSKALEFIEEEMAASDERDEIISFIRESERGIIKRYTKTDDDDD"
     gene            9992..10615
                     /locus_tag="VEV83_04180"
     CDS             9992..10615
                     /locus_tag="VEV83_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK44341.1"
                     /translation="MKIILNNAGKRFSREWIFRKLDYEFSGDNWYAITGPNGSGKSTL
                     LQILSASMLLNEGQVEWVNGKAIEPDTVHLWISFAAPYLELIEEMTAKEFLHFHSTFK
                     KFLNGFSAEQILSMAALDHAMDKQIRNFSSGMKQRLKLAQAIFSDVPVVLLDEPCTNL
                     DTSGFELYYKWINEFCKGRLLIISSNDVAEYKFCNEQLKMQDFKTSP"
     gene            complement(10624..11988)
                     /gene="tig"
                     /locus_tag="VEV83_04185"
     CDS             complement(10624..11988)
                     /gene="tig"
                     /locus_tag="VEV83_04185"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HYK44342.1"
                     /translation="MATITREKLGTLNDKLTINLGKEDYLPSFEKSLKSYAKSANIPG
                     FRKGMVPSGLIKKMYGQSVFTEEVLRTVEKELQNYMTAEQLEIFAQPLPLESDSRMLD
                     MHHPGDYAFAFEIGLKPDFEINTDDMQVTKYKVEVTDEMIDEEINRMRTRYGKMTEPE
                     TISREEEVLNVHFTEADPAGKNIEEGIEKDNSLLLKYFSPDTQNELRGRKKDDTILIQ
                     LNKAFEEKEREWILDDLGLDKEQPKNAEKFFNLQITKIGFVEKAEMDENFFKTLYPES
                     GISNEEEFRNAVKVEIERYYDSQSRNQLDDQIYHYLVDHVQIDFPENFLKRWLQEGGE
                     KPKSAEDAEKELPVFLNQLKWTLISTKLINDNQVKVEQEEIKDFARAQISSYMRGQSI
                     NDAPWLDEYANRMLHDKKFVEETYTRLQTEKLFTLLETRATIIEEPVSAKEFEEKAHH
                     HHHH"
     gene            complement(12096..12177)
                     /locus_tag="VEV83_04190"
     tRNA            complement(12096..12177)
                     /locus_tag="VEV83_04190"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12141..12143),aa:Leu,seq:tag)
     gene            12408..13049
                     /locus_tag="VEV83_04195"
     CDS             12408..13049
                     /locus_tag="VEV83_04195"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK44343.1"
                     /translation="MKKLLLAAVLTYALNAAYSQSFGVQAGAAFYSGKATSQGVSIKY
                     DTKVGFTAGIVYSAPIGSKFSFMPSLNFTQKGGTYTLDDGDEDKLTLSYIELPLNFVY
                     NATSKGGTFFIGAGPDLAFGMGGKEDFEGDKTDINFGSGDDDDFKSFDFGVNILAGYR
                     LNSGLFFAANYNPGISDIAPDNAGDVEWHNNGFAIRLGYMFGGKKAPSSSSTQ"
     gene            13366..14001
                     /locus_tag="VEV83_04200"
     CDS             13366..14001
                     /locus_tag="VEV83_04200"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK44344.1"
                     /translation="MKKILLIFPLVLCITATHAQDPSATQLAYDSKKWSLGFHAGASF
                     YYAKETFASRPLRYGGKTGLTAGVVCSARIGRKFSFMPSLNFTQKGGTYPFDGEVTLN
                     YIELPLNLVYHINCGSGSFFFGAGPDIAFGVGGTEKFDGQETDVHFGTGDDDDLKPFE
                     FSANILAGYKLRNGLCFAANYNPGISNIATGNDGVSKWHNHGSVFRIGYLF"
     gene            complement(14086..15009)
                     /gene="lipA"
                     /locus_tag="VEV83_04205"
     CDS             complement(14086..15009)
                     /gene="lipA"
                     /locus_tag="VEV83_04205"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HYK44345.1"
                     /translation="MEQSVCAPENGLKPKIKKPDWLRVKLPIGESYKHVRNLVDTHKL
                     HTICESGNCPNMGECWGAGTATFMILGNICTRSCGFCAVATGRPNAVDWDEPERVAEA
                     IYLMKVKHAVITSVDRDELRDGGSVIWQNTIKAVKALNPKTTLETLIPDFKGEHENIQ
                     RIMEAAPEVVSHNIETVERLTRQVRIQAKYRRSMDVLRILKKGGMRTKTGIMLGLGES
                     KEEVIETMNDLAAVNVDVLTLGQYLQPTSKHLVVERFVHPDEFAEFREIGYSLGFDYV
                     ESGPLVRSSYHSEKHVFAGYGRKEWLNEKVS"
BASE COUNT         4187 a         3219 c         3436 g         4200 t
ORIGIN      
        1 cgtgatgaaa aaatgatctt tccaaaagat caaataatga aacttggcga actgggtttt
       61 ttgggtatga tggtaaaccc aaaatatggc ggctccggac tcgatacggt aagctatgtt
      121 attgcgatgg aagaaatttc aaaagtagac gcgagcacca gcgtttgcat gagcgtgaac
      181 aatagtcttg tttgttgggg acttgaggcg ttcggcactg aggaccaaaa acagaaatat
      241 cttactccgc ttgcaatggg aaaaaaagac aatgagctac acatcggcgc attcttatta
      301 agcgagccgg aagcaggaag cgatgcaact tctcaacata ccatagctga agataagggc
      361 gaccattacc tggttaatgg aacaaagaac tggatcacga acggcaacag tgcaagtgtt
      421 tacctggtga tggcgcaaac cgatgcgtca aaaaaagcca ggggtatcaa cgcgttgatc
      481 attgaaaaaa attggccggg tgttagcgtg ggggcaaaag agaataaatt gggtattcgc
      541 ggcagcgaca cacattctat acaattcagc gatgtaaaag ttccaaaaga aaacaggatc
      601 ggaaaagacg gctttggttt caagtttgcg atgcaggtgt taagcggcgg aaggatcggt
      661 attgcagcgc aggcgttggg aattgcaagc ggcgcttttg aaagggcatt gcgctattcg
      721 caggaacgaa aggcttttgg aacacctatt attaatcacc aggcgataca atttaaactc
      781 gctgatatgg cgacacgcat tgaggcggcg cgtttgcttt gcttcagggc agcttttgat
      841 aaagacaacc gggacgacta taccatcagt tcatctatgg caaaagtgtt cgcgtcagaa
      901 accgcaatgt gggtgactac cgaagcggta caggtgcacg gcggatacgg atacgtaaaa
      961 gagtatcatg tggaacgttt gatgcgcgat gcgaagatca cccagattta tgagggtacg
     1021 agtgaggttc agcgtatggt cattggccga tcgctggcaa aatgatcatc ttccctttct
     1081 gaaataatta ggatcgtggg aaggacagct tgcactactc cggctcatat aacatgatga
     1141 aaagaccgac gaaagaaata ataccgtcag cagtagtatg aatgttttac gcatagaagc
     1201 caatttctct gaaaaataga cgtcaaatat aataacgatt ttatgataat aaaaagtatt
     1261 ggctcgtttt tttgcgtaat cgcctcctgc cttacacatt aacttagtaa tttcgccacg
     1321 ccaactatcg attgaatgaa tcttcaaatt tcacgtcccc tcgccattat cgaccttgaa
     1381 acaaccggtg taaacgtatc cgttgataag ataatagaga tcgctatagt gaagctgctg
     1441 ccggacggca ccacgcagct gaaaagaaag atcatcaacc ctcaatcgcc aattcccgcc
     1501 agctcaagcg atgtgcacgg aattaccgat gagatggtga agaatgcgcc aacgtttaag
     1561 caggtagcaa atgagataaa gcagtttctt gacaattgcg accttggcgg atataacagc
     1621 aatcgcctcg acatcccgat gctgatagaa gaattcctga gagtgggact ggagtttaat
     1681 accgatggaa gaagattcat tgacgttcaa aagatcttcc atatgatgga acagcgaacg
     1741 cttgcggcgg cttataaatt ttattgtaat aaagctctcg aacaggcgca cagcgcgcag
     1801 gcagacgctt tagcaacatt ggagatacta cacgcacaaa tagaacgata cccgcagatc
     1861 ggaacgacaa tcgaaacgat actgaattgt gttggcgaag aagattgcgt tgattttgca
     1921 cgacgtatgg tgaggattga cggaattgag atcttcaatt tcggaaagca taaaggaaag
     1981 gccgtggccg aggtgcttcg aatcgaaccg caatattatg actggatgat gaaaggcgat
     2041 ttccccatga acacaaaaca aaagctcacg gagatactca accgtacact gatcaagaaa
     2101 gttaattaaa ttccagtttt ggctttttat ttacctgatt gcttaggaat attgtatttt
     2161 cgaatgctcc caagctgccg tctttttgga aaagatagtg atcataccta cctacaatga
     2221 aattgagaat atcccactga ttctcgactc aatttttgcc aacaatgata attatcacgt
     2281 actggttgtc gatgatagct cacccgatgg aactgcaacc gaagtaaagc ggttgatgaa
     2341 tcgttatgcc ggaaaattat ttgtggagga gcgggaaggc aaactgggtc ttggaactgc
     2401 atacatatac gggttcaagt gggcgattag aaaaggatat gaatttattt ttgaaatgga
     2461 tgccgacttc tcgcataacc cgtctgatct tgagcgcctt tatgaaactt gtaagttcga
     2521 aggatatgac gttgcgatcg gaagtcggta tgtggagggt gggaaaatcg agaactggcc
     2581 ggttgaccgc cacatctatt caaagggtgg cgccttatac accaggttga taacatttat
     2641 gcctgtcaaa gacccgacag ccggctttgt ttgttatcgc aaacaagttt tggaagcgat
     2701 aaattttgat gaaataaagt tcattggtta tgctttccag atcgaaatga aatttgtcgc
     2761 ctggaaactg ggcttcaaaa taaaagaagt gccgatcgta tttgttgacc gcaagatcgg
     2821 cgtaagtaag atgagcaaac gaattttaag cgaaggtgta cttggcgtac ttgctatcca
     2881 gatgaaaagc ctgttcaaaa actaccggcg gcggatggca gcacagccgc ttgctccgaa
     2941 aagctaccca gcttctgtcc tcacagaatc agagtaaatc taaacaattg ctttttagcg
     3001 ctttaccaat tattaagaaa agcatctaag agtttacatt attttaatag ctttgtccat
     3061 accccggtcc ggaaaaaaat cgaatttgca ttgctaaccc aggcattcta accggttccc
     3121 gttaaattct cgatagattc tttcagaaaa agtatttaaa agtcaggcta tgtattcgta
     3181 tgctttatta gaaccaggtt gttattatct agtacaggaa aaagaaaatg aaggcctcac
     3241 acttttgcaa accaaagtgg tgagcgatca ttgcatgtat gttgagaagt atgctgaatc
     3301 agttgtacag gaatggaaac ggaaaaccga cccgatcttc gacatcgtgg aattgttgag
     3361 tgatgatgtc gtaaaggaat ggaccgatct ttattacagc aacgaggatg cttatcatga
     3421 agaagatgac gagtgagtaa gccagtcggc cttacctgct agtcattttt attaggggaa
     3481 cgatcatttc ctccatactt atgccgccat gctgaaaggt attgcggtag tagttcacgt
     3541 aataattgta gttattaggg taacataaat aaccgtcttc cttagcaaaa atgtaagagg
     3601 aattcacatt aggaaccggc agtcctccta gcctcggatc acgaaaggct aaaacatccc
     3661 tcgcctcgta gttcaaatta cggccatgtt tgtaacgaag attggcggta gtttgtttgt
     3721 caccgataac tttatacggc gtattcacac gcacacttcc atggtctgta gccaggatga
     3781 gatttatttt tttgtcagcg atcttcttta atgcctggtg cagcgggctg tattcaaacc
     3841 agctccgggt gatgctgcga tagctgatct catctcctgc cagctctttc aacacttcca
     3901 tttctgtgcg cgcatggctg agcatatcaa caaaattgta aacgataatg ttgaggtcgt
     3961 tgttcaacag gttatgaata ttgttgagca attgctggcc gtcgttgtga tgcaacactt
     4021 ttgtataact gaacttaatg tcatctcttt tcagcctttt caactgcgcc ctgaaaaaat
     4081 cctcttcata tgaattcttg cttccctcat cgtcgtcatt cttccattgg tttggaaatt
     4141 gtttttctat ttcaacgggt agcattcctg caaaaattgc attgcggctg tattgcgttg
     4201 cggtgggaag aatgctgtag aacgtttctt cttcaagtat gcggaagctt tcggcaaaga
     4261 ttggctgaat agctttccat tgatccagtc gcaggttatc gatcaacaca aaaaaagtag
     4321 gcgtcccctt ttctatctgc ggcaaaatct tatgacgaaa gacattgtgg ctcattaccg
     4381 gggcatcggt cgttttcgca ttcacccagc tcaaataatt tttactgatg aatttgaaaa
     4441 attcagtatt ggcctcttgt ttctgcgttt gaaacacctc ctgcatttca gggctgttgc
     4501 tcttttccat ttccagttcc cagtaaacaa gctttttgta aatgtccatc cactcgttat
     4561 aatccgggct gctattcaat gccatgaaga ggttgcggaa ctgctgttgg taagcggagg
     4621 ttgttcgttc agccaccaac cttttattgt caatgatctt tttcaggcaa agcaaaacct
     4681 ggttcgggtt cacaggttta ataaggtagt cagttatctg gctgccgatg gcttcctcca
     4741 tcaggttttc agtttcattc tttgtgatca tcacaacggg gatgttgctt acttctttga
     4801 tcttctgcaa tgtttccaat cctgtgatac ccggcatggt ctcgtcaagc aatacaatat
     4861 ccaggttgtt ttcttttaca aaatcaattg catcgaatcc gtttgcccgt gtatgaactt
     4921 cgtatccttt attttctaaa aataatttct gtgattgaag attctcgatc tcgtcgtcaa
     4981 cccaaagtat agttgctaca gccatttcaa ttacgattta aagtttgcga tttacgattc
     5041 ccttctcgtg aaagattttt tggctcgcgt caaaagatat cggcggtttt gcaatctttg
     5101 tagagtttgt aaaagtattt tttaaaagcc ggagtgattt atataataag ttattaaaaa
     5161 ctcatttaac aaagcgtcaa cagcatggag cagactaaaa gaaaaataat aaatgatccg
     5221 atctatggtt ttatcactgt tgaccatcct ctcttgtttt tcatcattga tcatccgtgg
     5281 taccagcgat tacgccgtat ttaccaaatg gcgctggcac aattggtcta tcccggcgca
     5341 gtacacacac gactgcatca ttcattgggc gcgtatcatt tgatcagcct ggcaataaac
     5401 gaattgcgaa ataagggcgt tgatatctcg aaagacgagg agatcgcggc caaagcagca
     5461 atactgttgc acgacatagg tcatggccca ttttcacacg ccttagaaaa tgtgctggta
     5521 ccgggcattc atcatgagca cctgggtttg gagatcatgc atgagatgaa tcacgagtca
     5581 gggagcaagc tagatatgac catatcgatt tttacggacg aatatgaaaa accttttttg
     5641 caccagttga taagtggcca gctcgacgtc gacaggatgg attatttaac ccgcgacagt
     5701 ttttataccg gcgtaagcga aggagtgatt ggatatgatc gcatcctgaa aatgcttgca
     5761 gtggtggatg gcagtttgat gatcgaggaa aagggcttat acagcgtgga aaaattcctg
     5821 gttgcgcgac gacaaatgta ttggcaagtg tacttgcata aaacggtttt ggccgcagaa
     5881 aaaatgatcg tgaaaattat tgaacgggca agggaaataa atgcttgccg cagtcggtcg
     5941 gggcaatttt attcaacgct cgattatttt cttgaagatt ttaaaggcat ggatggatcg
     6001 gcccttgcaa aattttgttt gcttgatgat tacgatatca tgtttgcgat caagcaatgg
     6061 agtaatcacg acgaccaggt gctttccatt ttgtgccgtt cacttttaaa caggaagctt
     6121 ttcaaaagca ggcttcaaac gcttccgttt gatgacgagg aagtgcagct gaaaagacag
     6181 gaaattgccc gacaattcaa cgtcccgatc gaggaagccg catactttgc ttttaccggc
     6241 gaggcagtta ataccacgta ccagctcgcg gacgagcgta tcaacatagt ttcaaaggac
     6301 ggcactatac gtgatatctc ccaggtcgac gatcccttaa ttcacaaaac actttctatg
     6361 ccggttaaaa aattttacat ttgctattta acatagccgt gcacatattt ttcaaggcgt
     6421 tcccgttaac caggaaccac aaagtttttt tatgaagatc aatgcagacc gcattgccct
     6481 gttgattcgt ggaaaagtgg aaggagatgg caacgcaacg gtaaattcat ttggaaagat
     6541 tgaggaagca aaaccaggcc aactagcttt tcttgccaat ccgaaatatg aagaatttct
     6601 gtacacgacc aacgcgtcaa tcataattgt aaatgatgcg caggaattga aacaaccggt
     6661 ccctgcaaca ttgatccgtg tgccggatgc ttatctcgct tttgcgagct tgctccaaaa
     6721 ataccaggct atgatccagg agcagttgac cgggatccag cagccaagtt ttatagatcc
     6781 atctgcatgt ttaggcgaga atgtgtttgt aggcgcgttc acgtacattg gtgaaaacgc
     6841 aaacattggc aacaatgtga aactctttcc gggcgtttac atcggcaatg atacaaccat
     6901 aggcgataac agcattttgc atccgggcgt aaagatctat ttcggttgtg tgattggcaa
     6961 acaggtgact attcacgcag gcactgtggt tggcggcgat ggattcggtt ttgcaccgca
     7021 ggatgatggc acttaccaga aggttccgca aatcggtaat gttgtcatag aagacgatgt
     7081 tgaaattgga tctaactcaa ctattgaccg cgcgaccgtg ggttcaacaa ttattcgcgc
     7141 cggtaccaag cttgataacc tcatacagat agcgcacaat gttgaagttg gtaacaacac
     7201 ggtcattgct gcgcaggcag gcattagtgg cagtacgaag atcggaagca atgtaatgat
     7261 cggcgggcaa gctggtattg tgggtcacct gcagctcgcg gatggagtta aggtgaatgc
     7321 tcaaagtggc gtttcaaaat ccatcaaaca aaaaaatact gctgttaccg ggagccccgc
     7381 ctatgattac acaagtgcac tccgaagcca ggctatcagt cgcaatcttc cacaacttga
     7441 aaagaggctc gctgaacttg aaaaattagt gcagcaattg atgcaggaaa aagtaagttt
     7501 ttaaaggaac cacttccgta tcgataactc tcacctgcgt tgagatccag gggacatcac
     7561 cgaatgctgt cgataattaa accttatttt tgcagccgaa aaaaactacc ggcctaatcc
     7621 tgtgcacgtt gaacgaattg acggttaaac taaatgtata gatggatacg aactttaatc
     7681 ctgataaaca acatactctt tccaaagcgg taacaatcag tgggacaggt ttgcataccg
     7741 gtgtgctggt tgatatgagg ctaaacccag cccatccagg tttcggagtt cagttccagc
     7801 gcgttgatct gccggggtcg gcgcctataa aggcagattg cgacctcgtc accgatacca
     7861 gccgcggcac aaccttgcag gtagatgatg cgaaggtgag cacggtagaa catatacttg
     7921 cggccctcgt gggaatggga gttgacaatg tcctgatcga gatcaatggc cctgaaatac
     7981 ctatcatgga tggcagctcg cagcccttcc tcgacttgat agaagaagct ggcgtgtctg
     8041 agcaggaggc tgcaaaagcg tggtacagtc ttgaagaaaa catttatcat tacgatgaag
     8101 aaaagcgggt ggaaatgact gccttccctt caaccagcta ccagatcacg accctgatcg
     8161 atttcaacag ccccgtactt ggaacgcaac atgcaggatt aaagaatatg cgcgatttca
     8221 aggacgagat cgctccgtgc cgtactttct gttttttgca tgaattagaa atgttgctcg
     8281 ataataacct tataaaaggc ggcgacatca acaatgctat tgtcgttgta gataaggtgg
     8341 tcgatgcgga agaaatgaag cgcctgaaaa aagttttcaa gaaagacagg atcgaagtaa
     8401 aaagcgaggg atatttaaac aacctggagc tccggttccc gaacgagcct gcccgacata
     8461 aactgcttga cgttgtcggc gacctggcgc tgatcgggta tccgatcaag gcgaggatca
     8521 ttgcgaaccg gccgggccat agcagcaatg ttgagtttgc gaggaagatc aaacagtata
     8581 tcaaaaagaa caagcatgtg aaggacgtcc ctgtttacga tccgtcacag ccgccggtgt
     8641 acggtcactc gtacattgaa aaaaccctgc cgcatcgttt cccattttta ttgatcgata
     8701 agatcattga attaactgac acgcgcatag tgggcattaa gaacgtaaca ttcaacgaat
     8761 ggtttttcca ggggcatttt ccgtctaatc ctgtaatgcc cggtgttttg caagtggagg
     8821 ccctggcaca aaccggtggt attttgtgta ttaatgcgat gccgaatggc aaatacgata
     8881 cctatttctt aaagatcgat aactgcaaat tcaaacagaa agttgtaccg ggcgacacga
     8941 tgatcttgaa gatggagctg aacggcccta tacgcagagg catatgcgac atgaagggta
     9001 ccgtgtatgt gggtggaaaa gtcgctactg aggcggacct tgttgcgcag ctggttaaag
     9061 tggactaaaa acggttttag cactatttta agactgaacg tttaactttg cgccatttct
     9121 ctgtcaaatg atcgcgcttt tataaacggg ccgaaaccag aaatgattca tccgcatacg
     9181 tatatacact ccaatgccaa acttgctgaa aatgtaaaaa ttgatccgtt tacagttatc
     9241 cacgaggatg ttgaggtagg cgcaggtaca tggataggca gtaacgtaac cattatggag
     9301 ggagttcata tcggaaagaa ttgtcgaatc tttcccggcg cggtgatcgg cgctgttccc
     9361 caggatttga agtacaatgg tgaaaagaca tccgttgaaa tcggtgacaa tacgactata
     9421 agggaatttg tgacaataca tcgcggaacc cgcgaccgtt ggaaaacaac ggttggcaat
     9481 agttgcctga tcatggcata cagccacatt gcgcacgact gttctgtcgg caataattgc
     9541 atcatgagca acaacagcca aatggctggc catgttgtga tgtctgatta tgcctggata
     9601 gctggtttta ccgcgatcca ccagttcgtg aaaattggcc agcatgcttt tatagcaggc
     9661 ggaagccttg ttcgcaagga tgtgcctcct ttcattaagg ctgttcgaaa tcccttaagc
     9721 tatggcggcg tcaatagcgt cggccttaaa cgaagggggt tttcgctcga taagatcaac
     9781 gaaatacttg acatctatcg catcatttac aataaaggct taaacacttc caaggcgctc
     9841 gaattcatcg aagaagaaat ggctgccagt gatgaacgcg atgagatcat tagcttcata
     9901 cgcgaaagcg aaagagggat cataaaacgg tacaccaaaa ccgatgatga cgacgattaa
     9961 ctaactgtcg tcccctcagc tccaatcaaa catgaagatc attctgaata atgccggcaa
    10021 acgtttcagc cgcgaatgga ttttccgtaa gcttgattat gaattttcgg gcgacaattg
    10081 gtatgctata acagggccaa acggtagtgg gaaaagtacg ttattgcaaa tactgtcggc
    10141 ttcaatgttg ttgaacgaag gacaggtgga atgggtaaat ggtaaggcca ttgaacccga
    10201 cactgttcat ctctggattt cctttgctgc tccctacctg gaattaattg aagaaatgac
    10261 cgcaaaagaa ttcctgcatt ttcattcaac ctttaaaaag tttcttaatg ggttttccgc
    10321 ggagcaaatt ctttcgatgg ccgcacttga tcatgcgatg gataaacaaa tacgcaactt
    10381 cagcagcggc atgaagcaga gactaaaact cgcgcaggca atattttccg atgtgcccgt
    10441 ggtcttactc gacgaacctt gcaccaatct tgataccagc ggatttgagt tatattacaa
    10501 atggataaat gagttttgca agggacgctt gctgatcatc tcaagtaatg acgtagccga
    10561 atataaattt tgcaatgagc agttaaaaat gcaggatttc aaaacatctc cgtgatcgca
    10621 aaatcaatga tgatggtggt gatgagcttt ttcttcgaac tcttttgcgc tgaccggctc
    10681 ctcgataatg gttgccctcg tttcaagaag ggtaaataat ttttcagttt gaagacgagt
    10741 gtaagtttct tccacgaatt ttttatcgtg taacatgcgg ttcgcatatt catcgagcca
    10801 gggggcgtcg ttaatactct gacctcgcat ataactggaa atctgggcgc gcgcaaaatc
    10861 tttgatctct tcttgctcaa cttttacctg gttgtcattg atcagctttg tgctgataag
    10921 cgtccatttc aactggttca ggaaaaccgg taattctttt tccgcatctt cggccgactt
    10981 gggtttttca ccaccttcct gcagccaccg tttcagaaaa ttctcaggaa agtcaatttg
    11041 tacatggtct acaagatagt ggtagatctg atcgtcaagc tgattccggc tttggctatc
    11101 gtagtaccgc tcaatttcaa ctttgacggc gttgcgaaat tcttcttcat tcgaaatgcc
    11161 gctttccggg tataacgttt taaaaaagtt ctcgtccatc tctgcttttt ctacgaaccc
    11221 tattttggtt atttgcaggt tgaaaaactt ttccgcattt ttcggttgct ccttgtcaag
    11281 tcccaaatca tccaatatcc attcccgttc cttttcttcg aatgctttgt tgagctggat
    11341 cagaattgta tcgtcctttt ttctgcctct taattcgttt tgcgtatcag gtgaaaaata
    11401 tttgagcaaa agggaattgt ctttttcaat tccttcttca atattctttc ctgcaggatc
    11461 tgcttcggta aaatgcacat ttagtacttc ctcttctctg cttattgttt ccggttcggt
    11521 catctttcca tatcgtgtgc gcatccggtt tatttcttcg tcgatcattt catcagttac
    11581 ctctactttg tacttcgtta cctgcatatc atctgtgttg atctcaaaat cgggttttag
    11641 accgatctca aacgcaaagg catagtcgcc cggatgatgc atatcgagca tccgcgaatc
    11701 agattcgaga ggaaggggct gggcgaaaat ctccagttgt tccgccgtca tatagttctg
    11761 cagttctttt tcaactgtgc gcaacacttc ttccgtaaac accgactgcc catacatttt
    11821 cttgatcagg cctgagggta ccatgccctt tctgaaacct ggtatgttcg cgctcttagc
    11881 gtaactcttc aaactttttt cgaacgatgg gaggtaatct tctttcccaa gattgatcgt
    11941 gagcttatca ttcagtgttc ctagcttttc tcttgtgatc gttgccattg atatgaagtt
    12001 aattagttta ttgggtgact ggtttattag ttaatttgga aacgctcgaa tacacgaata
    12061 aactaatgaa ccgataaact aatcacctta ttttgtgcgg atggaggggg tcgaacccac
    12121 atgccttgcg gcgccagatc ctaagtctgg tgcgtctgcc agtttcgcca catccgctca
    12181 acaccaaacc gtgccgcaag ctcgcatact taaaaacagc gtgaagctgt ttgaatttcc
    12241 accccgccgg tttgcgatta agggcggcaa aaataatata aaaatcatga gcgtgcaagc
    12301 ctagttattc cactaacaat tgttaggaaa taattgactg ctgatcgtgt gaactttcat
    12361 gtggcaggct aaatttgctt tactttctaa actaaaacag aacatttatg aaaaagcttt
    12421 tgctggcagc cgtactcaca tacgcattaa acgctgccta ttctcaaagt ttcggcgtgc
    12481 aggccggtgc agccttttat tcaggcaagg caacgtctca gggcgtctcc attaaatatg
    12541 acaccaaggt aggttttacg gcaggtattg tttactctgc tcccattggc agtaagttca
    12601 gtttcatgcc ctcgctgaat tttacgcaga agggtggaac atataccctt gacgatggtg
    12661 atgaggacaa actcacttta agttacatcg agcttcctct gaattttgtg tacaacgcta
    12721 caagtaaggg aggtacattt tttattggcg ccggccctga tcttgcgttt ggcatgggag
    12781 gcaaggagga ctttgaaggt gataagacag acatcaattt tggaagtgga gatgatgacg
    12841 acttcaaatc ttttgatttc ggcgtgaata ttcttgcagg ttaccgcttg aatagcggcc
    12901 tattcttcgc ggcaaattat aaccccggga taagcgacat cgctcctgat aatgccggcg
    12961 acgttgaatg gcacaacaat ggatttgcaa ttcgccttgg gtacatgttc ggaggaaaaa
    13021 aggcgccttc cagttccagc acccaataga agagttgtct ggacacaaat ctaaaaaccg
    13081 aagctcattt caaacttcgg ttttttattt tcggcaattc gcgcgagcaa gggcgagcgc
    13141 cataaaaaga tcatttgttt tctgcatacg tcccgtcctt ttgttataga gagcccgcgt
    13201 tgtttccgtt tagacaggac cggccttgtc tccatgttta ccaaccgaaa attaaaaatt
    13261 cgcccgcacg tgttggcctg atattatgat aagtaaatcc taaatcacat tatatgttac
    13321 atttcaaatc ttactttagg gttcgtgctc aaccaaagtt agtttatgaa aaaaatacta
    13381 ttaatttttc cgttggtgct gtgtattacg gcaacacacg cacaagatcc gtcggctact
    13441 caattggcct atgattccaa aaagtggtcg ttgggatttc acgccggtgc atctttttac
    13501 tacgctaaag aaacattcgc gagtaggcca ctgcggtatg gtggaaaaac agggctaaca
    13561 gcgggcgttg tctgttcagc gcgaataggt cgtaagttca gttttatgcc ttccttgaat
    13621 tttacacaaa aagggggtac ttacccattt gatggcgaag tcacacttaa ctacattgaa
    13681 cttcctctga acctcgtata tcacataaat tgtggtagtg gtagcttttt tttcggagcc
    13741 ggacctgaca ttgcttttgg tgtgggagga acagagaaat ttgacggaca agaaacagat
    13801 gttcattttg gaaccgggga tgatgatgat ctaaaacctt ttgaatttag cgcaaacatc
    13861 cttgccggct ataaattaag aaatggatta tgctttgcag caaattataa tccgggcatt
    13921 agcaatattg caacaggcaa cgatggcgtt tccaaatggc ataatcatgg atccgtcttt
    13981 cgcattggtt atttgtttta atcgcattag aaaacagtaa atacgagcga agtaaacttc
    14041 aacaagggat agggcgctta caatttggct aatttactcc agtgatcaac taactttctc
    14101 attcaaccat tcctttcttc cataacccgc aaaaacgtgc ttttcgctat ggtatgagga
    14161 gcgcaccagc ggaccgcttt ctacataatc gaaaccgagc gagtacccga tctctctgaa
    14221 ctccgcgaac tcgtcaggat gaacaaaacg ttccaccacg agatgttttg aagtaggctg
    14281 tagatattgt ccaagtgtca gtacgtccac atttacagcg gcaagatcat tcatcgtctc
    14341 tattacctct tctttacttt ctccgaggcc aagcataatg ccggtctttg tgcgcatgcc
    14401 gcccttcttc aatatccgta gcacgtccat gctcctgcgg tactttgcct gaatgcgcac
    14461 ttgccgcgtc aatcgttcta ccgtttcaat attgtggctc actacttcgg gtgcagcttc
    14521 catgatccgc tgaatgtttt cgtgttctcc cttgaaatcg gggataagtg tttctaaggt
    14581 agttttcggg ttcaatgcct ttaccgcttt aatggtattt tgccagatca cagaaccgcc
    14641 gtctcttaat tcgtcgcggt cgacactcgt gatcaccgca tgttttacct tcatcaggta
    14701 gatcgcctca gcaacacgtt caggctcgtc ccaatctaca gcattaggcc ggccggttgc
    14761 aactgcgcaa aagccgcagc ttcttgtgca aatgtttccg aggatcataa aagttgcagt
    14821 gcccgcaccc cagcattctc ccatgtttgg acagttacca ctttcgcaaa ttgtatggag
    14881 cttatgcgtg tcaacaagat tgcggacatg cttgtagctt tcaccaatgg ggagcttcac
    14941 ccgcaaccag tcgggctttt ttatttttgg cttaaggcca ttttccggtg cacagacgga
    15001 ctgctccatg agcttacaaa cttttggatg atctgagaag aa
//
LOCUS       DASQJI010000140        10573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1087105,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000140 DASQJI010000000
VERSION     DASQJI010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10573
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087105"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VEV83_04210"
     CDS             <1..439
                     /locus_tag="VEV83_04210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44346.1"
                     /translation="TIMKQALLRFSGKKFISAAILSASLLLTSSGGFAATHSSNIEIL
                     SGEKTSVQFMGSTADALIFRVQIKNAKSENFTLSIQNEAGDVLFSRSFSDSNFLKQFK
                     VVNGETANEKYYFTIKSKDSDLQETYVASAVTKTVANVEINKL"
     gene            627..1475
                     /locus_tag="VEV83_04215"
     CDS             627..1475
                     /locus_tag="VEV83_04215"
                     /inference="COORDINATES: protein motif:HMM:NF025029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HYK44347.1"
                     /translation="MKKLILASAVCLFLFTALTSMIAQKKAAITHPTVNKIVSTVSST
                     DSSADLTLLIDSLYSSMHLSDAGLNRDVFLNAFKGYEYFVAENALNKPGLLTICDFSQ
                     PSSKKRLYVLDLNAGKILFNTYVAHGRNSGNDYATSFSNSDESHKSCLGFMITAETYN
                     GDNGYSMRLDGQENGFNNNVRPRAIVMHGSAYVNRERALNGTMMGRSWGCPAVPAAEV
                     HSIIDCIKGGSCFFNYYPDKLYTKASAILNSNFVWPVAHSLQTATAKIKDTMSAFTGS
                     VSNLMN"
     gene            1590..1862
                     /gene="rpsO"
                     /locus_tag="VEV83_04220"
     CDS             1590..1862
                     /gene="rpsO"
                     /locus_tag="VEV83_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HYK44348.1"
                     /translation="MSYLTTEKKTNIFTEFGGNASNTGSVEAQIALLTERITSISKHL
                     QQNKKDFATHSGLMRMVGQRKRLLTYLQKHNLQGYRALIEKLGLRK"
     gene            2002..4149
                     /gene="pnp"
                     /locus_tag="VEV83_04225"
     CDS             2002..4149
                     /gene="pnp"
                     /locus_tag="VEV83_04225"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HYK44349.1"
                     /translation="MLSQPIQVSFQLPDGQEVIIETGRLARQADGSVTVRQGNCIILA
                     TVVASKEPREGQSFFPLTVDYMEKFASAGRIPGSFFKREGRLNDYEVLVSRLIDRALR
                     PLFPEDYLCDVQVLVTLISSDAEILPDSLACLAASAALAVSDVPIKEIISEVRVGKVD
                     DEFVINPTRSQYAKATMDFMIGATEKNLMMVEGEAEECSEEDLINALQAAHDAIRVQI
                     KAQAELRQKIGVNEKREYAKPEHNEELKAKVVALCKDRLYQVSAGGTAKAERSEAFSL
                     IKDDLIISLGEDVSEDHIALAKKYYEELQWEVVRNMILDERKRLDGRKLDEVRPLNME
                     IDVLPSPHGSALFTRGETQSLTTVTLGTPLDELLVESAASSEYSRFILHYNFPPFSTG
                     EVKMMRGPGRREVGHGNLALRSLKQMMPGNEYPYTVRIVSDILESNGSSSMATVCAGS
                     LALMDAGVPIPKHVGGVAMGLITRADDNNYAILTDILGDEDHLGDMDFKVTGTRDGIC
                     GVQMDIKIDGLSMEVMREALDQARKGRLHILEAMYATTEAARPEVKPHAPRMEKLIID
                     KEFIGAVIGPQGKVIQEIQKETGTTINIEEVGSFGEVSIFSTNKEGVEKALRWIKGIV
                     AVPQVGDVYEAKVKTIQPYGAFVEFLPKKEGLLHISEISWKRLETIEGVLKEGDIVKV
                     KLIGIDHKTGKFKLSRKVLIPKPELKPKSQDQA"
     gene            complement(4365..5249)
                     /locus_tag="VEV83_04230"
     CDS             complement(4365..5249)
                     /locus_tag="VEV83_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HYK44350.1"
                     /translation="MILTPVTTVDDITPAHFKQTFYDAEVPVVIKNLSRRWPAYTKWN
                     WDYLKQIAGDKKVGIYNNVKSDAYTPINKADDYTTFGEYVDMIQKGPAAWRIFLFNIF
                     NHAPQLTEDFTWPEDYMKGFVKRVPMLFTGGQGSITHMHFDIDLSHILHTQFMGRKKV
                     LLFPFNEQHKLYRKPFEVLSLADFSNYYDAEKSKLDANKFPALNAAKGYEVTLEHGDT
                     LFMPGGYWHHMEYLDSGFAMSLRALNSSVTGKLKGLWNIAGMRNIDTLMKKTMPHKWY
                     AWKEKTLFEAAEKVVGAK"
     gene            5433..5897
                     /locus_tag="VEV83_04235"
     CDS             5433..5897
                     /locus_tag="VEV83_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44351.1"
                     /translation="MYDILLSLHNLLRWVILFLLVLNLIRHFAAINRPFNGLDKQLGL
                     WLMIAAHITLLIGLYQWFAGSLGLPNILQNGMGTVMQNPTYRFFAVEHAVGMLIAITL
                     ITIARGVYRKQLPDGKKHRRCIVFYILALVIILASIPWPGMEEISRPLFRNF"
     gene            complement(5938..6897)
                     /locus_tag="VEV83_04240"
     CDS             complement(5938..6897)
                     /locus_tag="VEV83_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK44352.1"
                     /translation="MKNGNNSTTSYFSVARNVWGMKDVFVNFYMIKNGDPDKWVLVDA
                     GLKTSYPRIKKMAHALFGEKKPEAIILTHGHFDHVGALKKLAEEWNVPVYAHYLELPY
                     LTGRSHYPPPDPTVGGGMMAFMSFMYPTDPVDIGNQISVLPEDGTVPGLKGWKYVHSP
                     GHTPGHISLFREEDKLLIAGDAFVTTKSESAIAVMLQTKKISRPPAYLTSDWQTAYRS
                     VKQLYDLSPEVVATGHGQPMTGEEARDGLEYLYQHFAEEMPLNGRYVDEPAVADANGL
                     LYTPPRKAAAIDAWVIAAVAATVVTAVTLSLVLRKRKRSRLRF"
     gene            complement(6905..9556)
                     /gene="cphA"
                     /locus_tag="VEV83_04245"
     CDS             complement(6905..9556)
                     /gene="cphA"
                     /locus_tag="VEV83_04245"
                     /EC_number="6.3.2.29"
                     /EC_number="6.3.2.30"
                     /inference="COORDINATES: protein motif:HMM:NF010623.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0051235 - maintenance of location [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HYK44353.1"
                     /translation="MKILELKVMRGPNYWSTYRQKLIVMKLDLEESEEFPTNKIDGFA
                     DRIQELIPTLYSHRCSEGKPGGFFERVRQGTWMGHVIEHIALEIQSLAGMQCGFGRTR
                     STNKSGVYHVVFSYQVENAGLYAAKAAVRIAQALESDIHYDIAKDIKELSRINKNEGL
                     GPSTQAIVNEAVKKGIPYKRIDNDSLLRLGQGIHQKLIRATMACTTSSIGVDIASDKE
                     ETKRILAESFIPLPRGKDVATVEELDEVIRDLGYPIVIKPVNGNHGRGVTTNILSKEK
                     AYEAFEVAHELSDKVIVEKFVRGIDYRFLVVNYKLVAVAKRTPAMVMGDDKSTIKELI
                     DDTNNDPRRGEDHENVLTTIKVDNVTNSILVQKNLTLNSVLPLGEILFLKDTANISTG
                     GTAKDVSDVVHPYNVFLAERIARLMNLDICGIDVIAEDIAIPITEKNGAVLEVNAGPG
                     FRMHLSPSIGPGRNVAEPLIKMLFPPGSASRIPIVAVTGTNGKTTVTRLIAHIASQAG
                     QSVGYTTTDGIYIQNQPVFFGDCSGPSSAEVVLRDPIVDFAVLECARGGILRSGLGFD
                     KCNVGIVTNISEDHLGLDEIHSLRELAKVKSVVPRSVFNHGYAVLNADDDLVFKMQED
                     LDCKIALFSMDADNDRIQEHCENGGLAAIVEKGYITICKGEWRTRIAKIKEIPLTFSG
                     RAQCMVQNILPAILTAVIYDFKIDTIRAALRSFIPSAETTPGRMNIFKFRNFDFMIDY
                     AHNVDSLRQLKTFIDQTTATAKIGIIASPGDRRDEDIRNLGFLAGKIFDEIIIRHDKD
                     GRGRTKEQLTQLTVQGIMQANAHAVINIISDELEAIQYAMDNAKKGSFIVLLSDKVQE
                     SIEYVSGLLKNEKQEKQKKQVNQNSYN"
     gene            complement(9898..10323)
                     /locus_tag="VEV83_04250"
     CDS             complement(9898..10323)
                     /locus_tag="VEV83_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44354.1"
                     /translation="MNYDYPQTDLSRGVLAGLLTGIVAAVVNTIFVILYRSATEFYEF
                     SGLDITVIVFGSILLSITCGLLFYFLVHYMRRGMAFYRAIVCIVTVLIVLLGIIVRRS
                     VMGNVPGEFKVLVVGTQVIIGGLGAFFIPYLFSHDRLIS"
BASE COUNT         2859 a         2445 c         2347 g         2922 t
ORIGIN      
        1 aacaattatg aaacaggcat tattaagatt ttcaggaaaa aaattcatct cagcagctat
       61 cctatcggca tctcttctat taacctcctc cggcggtttt gcagccactc attcttccaa
      121 tattgaaatc ctctcgggtg agaaaaccag tgtgcaattc atggggagca cggcggatgc
      181 gttgatcttt cgcgttcaaa taaaaaacgc caaaagcgaa aacttcacac tttcgattca
      241 aaatgaggcc ggcgatgtct tattttccag gtcgtttagc gattcgaatt ttctcaaaca
      301 attcaaagtg gtgaacgggg aaaccgcaaa tgaaaaatat tatttcacca ttaaatcaaa
      361 agacagcgac ctgcaagaaa cttatgtcgc atctgcggtt accaaaacgg tcgcgaacgt
      421 tgagatcaac aaattgtaaa catcaattgt ttggtactgg ctctcacttt cttcaaaaag
      481 aggtgagagc ctttttttgg actttatgta acatttcatt agaagaaagt tttgattctg
      541 cggcgtacct ttgcactcca ctattactca gggtttttta gaaaaaaata aatttccaac
      601 atcctttaaa aaaacaagat tttttaatga aaaaattaat cctggccagc gctgtatgtc
      661 tctttctttt tacggcgtta acttcaatga ttgctcaaaa aaaagctgcc attacccacc
      721 ctaccgtcaa caagatcgtt tccactgttt cctcaacgga cagcagcgct gatctgacct
      781 tgttgataga ttccctgtac tcatcgatgc atctttctga cgccggtttg aaccgggacg
      841 tgtttctcaa tgcattcaaa ggttatgagt acttcgttgc cgagaatgcg ctcaacaaac
      901 cgggcttatt aaccatttgc gatttcagcc aaccaagcag caagaaaagg ttgtatgtat
      961 tggatctaaa cgctggtaag atccttttca acacgtatgt ggcccacgga agaaattcgg
     1021 gtaacgatta tgcaaccagc ttttcgaaca gcgatgaatc gcataaaagt tgtcttggct
     1081 ttatgatcac ggctgaaacc tataatggcg ataacggtta cagtatgcgg ctcgatggac
     1141 aggagaatgg ctttaacaac aacgtaaggc cgagagccat cgttatgcat ggaagtgcat
     1201 acgtaaatcg cgagcgagct ctgaacggaa ctatgatggg ccgcagttgg ggatgtccgg
     1261 cggtacctgc cgctgaagtg cacagcataa ttgattgcat caaaggagga agctgtttct
     1321 ttaattatta tcctgacaag ctctatacga aagcgtctgc gatcttaaat tcaaattttg
     1381 tttggcctgt tgctcattcg ttgcaaacag ccaccgccaa gattaaggac acgatgtctg
     1441 cgttcaccgg cagcgttagc aatttgatga attaacctga ccaaccgggt gcttaaaata
     1501 acatgtcatt cgcttttcag ttttttaaat tacttttgcc gccttatata aagaagaaaa
     1561 aatctggatg ccttttaaat taaattgaga tgtcttattt aactactgaa aagaaaacaa
     1621 acatttttac ggaatttggc ggtaacgcgt cgaacacagg ttctgtggaa gcacaaattg
     1681 cgcttcttac tgaacgcatt acaagtatct ccaaacactt gcagcaaaac aaaaaagact
     1741 ttgctacaca cagtggcctg atgcggatgg ttggccaacg taagcgcctc ctcacgtatc
     1801 tgcagaaaca taacctgcaa ggctaccgtg ctctaatcga aaaacttggc ctcagaaaat
     1861 aatattcaaa agattatcct ggctgctgtg cagttgggat ttctttttaa ttgctgccac
     1921 cctctctcta atttctaagg cgatatcagc acgacgtgca cgctcattct ttcatttctc
     1981 aaattttatt caaaaaaatt tatgttatct caaccaatac aagtaagttt tcaactgccc
     2041 gatggacaag aagttattat tgaaaccggc cggcttgcac gccaggctga tggctctgta
     2101 actgttcgac agggtaactg catcatcctc gctacagtgg tggcctctaa ggaaccaaga
     2161 gaaggacagt ccttctttcc tctcaccgtc gactatatgg aaaagttcgc gtcggcagga
     2221 agaattcccg gttcgttttt taaacgagaa ggaagactca atgattatga ggtgttggtc
     2281 agccgcttga tcgaccgggc tttgcggcct ttattcccgg aagattattt gtgcgacgta
     2341 caggttctcg tgacactgat ctcgtctgat gctgaaatat tgcctgattc attggcttgc
     2401 ttagccgcca gcgctgcttt ggctgtgtct gatgttccga tcaaagagat catttctgaa
     2461 gtgcgtgtcg gcaaagttga tgatgagttt gttatcaacc ccacgcgttc gcagtatgcg
     2521 aaagcaacga tggatttcat gatcggtgcc accgagaaga atttaatgat ggtggaaggt
     2581 gaagctgaag aatgcagcga agaagatctt atcaatgcat tgcaggccgc acacgatgcg
     2641 atccgtgttc aaataaaagc gcaggctgaa ttgcggcaaa aaattggcgt gaacgaaaaa
     2701 cgcgaatatg ccaaacctga acacaatgaa gaactaaaag caaaggtggt tgcattgtgt
     2761 aaagaccgtt tgtaccaggt gtcagccggc ggaacagcga aagcagagcg cagcgaagca
     2821 tttagcctga taaaagacga ccttattatt tcccttgggg aagatgtatc agaagaccat
     2881 attgctcttg caaaaaagta ttacgaggaa ttgcaatggg aagtcgtgcg aaatatgatc
     2941 ctcgatgaaa gaaaacgttt ggacggccgg aaactcgatg aagttcgccc gttgaatatg
     3001 gagatcgatg tgctcccatc accgcacgga tcagcattat tcacgcgcgg tgaaacacag
     3061 tctttgacta ccgtaacact cggtacacct ctcgatgaat tattggttga aagcgctgcg
     3121 agcagcgaat acagccgctt cattttacat tataacttcc cccctttttc aactggtgaa
     3181 gtaaaaatga tgcgtggccc gggccggcgc gaagttggcc acggcaacct cgcgttgcgc
     3241 agcctgaagc aaatgatgcc cggcaatgaa tatccttaca cggttcgtat cgtgagcgac
     3301 attttggaaa gcaatggctc atcctctatg gccacggtat gcgctggttc tcttgcgctc
     3361 atggatgccg gtgtacccat cccaaaacat gtaggcggcg ttgccatggg attgatcacc
     3421 agggcagatg ataacaacta cgctatcctc accgacattc tgggggacga agatcacctg
     3481 ggggatatgg atttcaaagt aacaggcacc cgtgatggga tctgcggtgt gcagatggat
     3541 attaagatcg atggattaag tatggaagta atgcgcgaag cgctggatca ggcgcgcaaa
     3601 ggcaggcttc atattcttga ggccatgtat gccacaacgg aagctgcacg ccccgaggtg
     3661 aaaccacatg cgccgagaat ggagaaactg ataatcgaca aggaatttat cggagcagtt
     3721 atcggtcccc aaggcaaggt gatacaggag atccaaaaag aaactggtac taccatcaat
     3781 attgaagaag taggcagttt cggagaagta agcattttct ctaccaacaa agaaggcgtt
     3841 gaaaaggcgc tgagatggat aaaagggatt gttgcagtgc cgcaggttgg cgacgtgtac
     3901 gaggcaaaag tcaaaaccat tcagccgtac ggcgcgtttg ttgaattcct gccaaagaaa
     3961 gaaggtcttc ttcacatcag tgaaataagc tggaaacgtc tggaaacaat tgaaggcgtt
     4021 ttaaaagagg gcgacatcgt aaaggtaaaa ctcattggta tcgatcataa gactggcaaa
     4081 tttaaattaa gccgaaaagt acttatacca aaaccagaac taaaaccaaa gtcgcaggac
     4141 caggcctgat cagtcttcac ctaatctttt tttaagccat gtatcccatg gctttttgtt
     4201 ttacgacaaa cagacgtgtg aaaaatcaca tcgaaaaatg tgagaaatca catttttcag
     4261 gctcttgcct cgaaggaact ttgtgctgtt atgagccttt gctcaaacga tttattgggg
     4321 gttatatgct gacaaaaatt acggcggttt tttaaccgct gtttttattt tgcacccacc
     4381 accttctctg cggcttcaaa taaagttttt tctttccatg cataccattt atgtggcatt
     4441 gtctttttca tcagcgtatc gatgttgcgc atgccggcaa tgttccaaag gcctttcaac
     4501 ttgccggtaa ccgagctgtt aagtgctcgc aggctcatag cgaagccact gtccaggtat
     4561 tccatgtgat gccagtagcc gcccggcata aacagggtat cgccgtgttc cagcgtgact
     4621 tcatatcctt ttgccgcatt cagcgcaggg aacttgttcg cgtcgagctt acttttctct
     4681 gcatcgtaat agttgctgaa atctgcgagg ctcaatacct cgaacggctt ccgataaagt
     4741 ttgtgttgtt cattaaaagg aaacaacaat actttttttc gccccatgaa ttgggtatgc
     4801 aaaatatgac tgaggtcaat gtcgaaatgc atatgggtaa tggaaccctg gccgccggtg
     4861 aatagcatag gcacgcgttt tacaaagcct ttcatataat cttcaggcca ggtgaaatct
     4921 tctgttagct gcggagcatg attgaaaata ttgaacaaaa aaattctcca ggccgcaggg
     4981 cccttttgta tcatatccac gtactcgccg aaggtggtat aatcatctgc tttgttgatc
     5041 ggggtgtaag catcactttt tacattgttg tagataccaa ccttcttatc ccccgcaatt
     5101 tgttttaaat aatcccagtt ccacttcgtg taagccggcc atcgcctcga taagtttttt
     5161 atcaccaccg gcacctcggc gtcatagaaa gtttgtttga aatgtgcggg ggtaatatcg
     5221 tcaacggttg taacaggcgt gaggatcatg caaaaaattt acggtgcaaa aatatgctgg
     5281 ctggccttaa tgcaaagttg ggattattta tcagttcaac tcatcccgat aaaaatccag
     5341 cttgcaaact ccagttgtga attgcaattc atatcaatta ttcatctttc atgtttgcgc
     5401 cttatttttg aagcggacaa attcgccaaa ccatgtatga tatcctgctc agcctccaca
     5461 atttgttacg gtgggtaata ctgtttctgc tggtgttgaa cctgataagg cactttgccg
     5521 caatcaatcg gccgtttaat ggactcgaca agcaactcgg cctttggctt atgatcgcag
     5581 cacatatcac gttattgatc ggtctatacc agtggtttgc aggtagcctc gggttaccaa
     5641 atattttgca gaatgggatg gggaccgtga tgcaaaatcc aacctaccgt ttttttgcgg
     5701 tggaacatgc ggttggcatg ctgatagcta tcacattgat cacaattgct cgtggcgtat
     5761 atagaaaaca gttgcccgat gggaaaaaac acaggcgatg cattgtgttt tatattctgg
     5821 cgctggtaat catccttgcg tcgattccgt ggccgggcat ggaagaaata agccgaccat
     5881 tattcaggaa tttttgagac taacagcaaa acattgacgg ccgtgccttc attctcttta
     5941 gaagcgcaga cgcgacctct tcctctttct taagacaagc gataatgtaa ccgcagttac
     6001 cacagtggct gcaactgcag caatcaccca cgcatcaatg gcagccgctt ttcgcggagg
     6061 cgtataaaga agaccgttag catccgcaac ggccggctca tcaacatatc ttccattcaa
     6121 gggcatctct tcggcaaaat gctggtacaa atactcgagc ccgtcacggg cttcttcacc
     6181 cgtcatcggt tgcccgtgcc cggttgcaac aacttcaggt gagagatcgt acaattgctt
     6241 caccgatctg taagcagttt gccagtcgct tgtcaaatat gcgggcggtc ttgagatctt
     6301 tttagtctgc aacatcacag caatggctga ttcacttttt gtagtaacaa atgcatcgcc
     6361 ggctatcaat agcttatcct cctccctaaa gagactaatg tgccccggcg tatgtcccgg
     6421 tgaatgcacg tatttccaac ccttcaggcc tgggacggtg ccatcttcag gtaacacgct
     6481 tatttgatta cctatgtcaa ccggatcggt gggatacata aacgacatga aagccatcat
     6541 tccgcctcct actgttggat ccggaggagg ataatgggat ctgccagtca ggtatggaag
     6601 ttcgaggtaa tgagcgtaaa ccggcacatt ccattcctcg gccaattttt tcagcgctcc
     6661 cacgtgatca aaatgtccat gcgtgagaat gatggcttca ggttttttct ctccaaaaag
     6721 agcgtgcgcc atttttttga tcctcgggta tgacgttttc aaaccagcgt ctaccaacac
     6781 ccacttatcc gggtcgccgt tcttgatcat gtaaaagttg acaaaaacgt ctttcattcc
     6841 ccaaacattc cgtgcgacag aaaagtagga ggtcgttgag ttatttccgt ttttcataag
     6901 ggttttaatt gtacgagttt tgatttactt gtttcttttg cttttcctgt ttttcatttt
     6961 tcaacaatcc tgacacatat tcgatgcttt cctggacctt atcactgagc agcacgatga
     7021 atgaaccttt cttcgcatta tccatcgcgt actgaatcgc ctccaactcg tcggaaatta
     7081 tattaatgac cgcatgcgca tttgcctgca ttattccctg cacggtgagt tgcgtcagtt
     7141 gctcttttgt cctgccccgg ccatctttat catgacggat aatgatctcg tcaaaaattt
     7201 tccccgcaag aaagcccagg ttccttatgt cttcatcccg acgatcaccc ggcgaagcga
     7261 tgatcccgat ctttgcagtt gccgtcgttt gatctatgaa tgttttaagc tgccgcaggc
     7321 tgtcgacatt gtgcgcataa tcgatcatga agtcgaaatt cctgaacttg aaaatattca
     7381 tgcgccccgg cgtggtctct gcggacggga taaaagatct taatgctgct cttatcgtgt
     7441 cgatcttgaa gtcatagatc actgctgtta agattgcagg aagaatattt tgcaccatgc
     7501 actgcgctct gcctgaaaat gtgagcggga tctctttgat cttcgctatt ctcgtccgcc
     7561 actccccttt acagatcgtg atataacctt tctcgacgat cgctgcaagg ccaccattct
     7621 cgcaatgttc ctggatccga tcgttatctg cgtccatgct gaacagcgcg attttacaat
     7681 ccagatcctc ctgcatttta aaaacaaggt cgtcgtctgc attcagcacc gcatatccat
     7741 ggttaaacac gctgcgtggc accacagatt ttacttttgc aagttctctt agagaatgta
     7801 tctcgtcgag gccgaggtgg tcttctgaaa tgtttgtaac aatacccaca ttgcacttat
     7861 caaatcccaa acctgagcgc agaattcctc cgcgcgcaca ttcaagcaca gcgaaatcaa
     7921 ctattgggtc ccgcagtact acttctgcac ttgacggacc gctgcagtcg ccgaaaaaca
     7981 ccggctggtt ctgtatataa attccgtcgg tcgttgtgta tcccacagat tggccggcct
     8041 ggctcgcgat gtgcgcgatc aaacgggtaa ccgtagtctt tccgtttgtg cctgtaacag
     8101 caacgatcgg aatgcgtgag gcactgccgg gaggaaaaag cattttaatg agaggttcag
     8161 caacattcct gcccggacca attgaaggag acaaatgcat ccggaaacca gggccggcgt
     8221 ttacttccag caccgcccca tttttttcag tgattggaat ggcaatgtct tcagcaatga
     8281 cgtctattcc acagatatca agattcatta atcgcgcaat acgttccgcg aggaaaacat
     8341 tgtacggatg cactacatca ctcacatctt tagcggtgcc gccggtgctt atgttcgcag
     8401 tatccttcaa gaacaatatt tcaccaagcg gcaacaccga gtttaacgta agattttttt
     8461 ggaccaggat cgaattagta acattgtcaa cttttatagt cgtcaaaaca ttttcatggt
     8521 cttcgccgcg ccgtggatcg ttgttcgtgt cgtcgatgag ttctttgatc gtcgatttgt
     8581 catcccccat caccattgcg ggcgtccgct ttgcaacagc gacgagcttg taattgacaa
     8641 ccaggaaacg gtaatctatg ccgcgcacaa atttctcgac gatgaccttg tcagataatt
     8701 catgcgcaac ttcgaaagct tcgtatgctt tttcttttga gagaatgttc gttgtaacgc
     8761 ccctgccgtg gttcccgtta accggcttga tcacgatcgg ataaccgaga tcccggatca
     8821 cctcgtcgag ctcttcaaca gtcgcaacat cttttccgcg aggaagcgga ataaaagatt
     8881 ccgccaatat tctttttgtt tcttccttat cagaggctat gtcgacacca atgctgcttg
     8941 tggtgcaggc cattgttgcg cgaatcagtt tttgatgaat tccctgtccg agcctcaaca
     9001 acgaatcgtt gtcgatacgt ttatatggaa tccctttttt caccgcctca tttacgatgg
     9061 cctgcgtgct cgggccgagg ccttcatttt tattgatgcg cgatagctct ttaatatctt
     9121 ttgcgatatc ataatgaatg tcgctttcga gcgcctgcgc gatccgcacg gctgctttgg
     9181 cggcatatag tccggcgttt tccacctggt atgaaaacac cacatgatac acgcccgatt
     9241 tatttgtcga gcgtgttctt ccaaatccgc attgcatacc agcaagcgac tggatttcca
     9301 aagcaatgtg ttcgataacg tgacccatcc aggtgccttg tcttaccctt tcaaaaaagc
     9361 cgcccggttt tccttccgag cacctgtggc tgtacagcgt ggggatgagt tcctgtatcc
     9421 tgtcagcaaa accatcgatc ttatttgtcg gaaattcctc tgactcttca aggtccaact
     9481 tcattacaat cagtttttgc ctataggtag accaatagtt cggtccccgc ataactttca
     9541 attcaaggat cttcataact tatttttaga tgaataagga tttaaaattt gttgagtgaa
     9601 taggttggca attggctgga aagtgagcga tcagatatat ggatggttcg catcatacga
     9661 ctagctgatt ctctattgca aacaatgtgc tcacaatttt tcattacact tgctaaatgt
     9721 taattgcggg cagttgggga agcgctgggc ggatattcca caattttaaa gccgcccgtt
     9781 ttgcatgcac gttttcatat aatatccaaa gacgaaaatg aagagagcag gcagtcgtat
     9841 tgaagtatag tggatgaaag atgcgtagcg gcgcttttta ctacatatcg cgtttattca
     9901 gctgatcaag cggtcatggc tgaaaagata ggggataaaa aaggccccaa ggccgccgat
     9961 aatcacctgc gttccaacga ctaaaacttt gaactcgcca ggcacattgc ccattaccga
    10021 acgccgcaca attatcccta acaaaacgat caggacggtt actatgcaaa cgatcgcgcg
    10081 gtaaaaagcc atacctctcc tcatgtaatg cacaagaaaa taaaacagca ggccacaggt
    10141 tatagaaagt aatattgaac caaaaacaat aactgttatg tcaaggccac tgaattcgta
    10201 aaactcggtg gcgctgcggt acaggatcac gaaaatagta ttcacaacag cagccacgat
    10261 gccggtgagt aacccggcca gaacgcctct tgaaagatcg gtttgcggat aatcgtaatt
    10321 catactccct gatttttgtt ttagcaattt ggttactaca gaccgtgaag gttcgatgcc
    10381 aggcattgat atgaatcagc gaagagttat atgcaatcgt tagtctgctc cagtgaaggt
    10441 acttatattt aaaaaacgta cgtaaattgt tgtcaatttt ttatcgcgtt acacacccat
    10501 ccgtactatg ccattaaata taaaactaga ggatcttgta accaggggaa agcaggccga
    10561 gtctgatgaa gac
//
LOCUS       DASQJI010000141         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1701857,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000141 DASQJI010000000
VERSION     DASQJI010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701857"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /gene="bshA"
                     /locus_tag="VEV83_04255"
     CDS             complement(<1..785)
                     /gene="bshA"
                     /locus_tag="VEV83_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HYK44355.1"
                     /translation="MRIGIVCYPTYGGSGVLATELGKALADKGHQVHFITYQQPVRLN
                     IFSANIFYHEVSVPTYPLFDYPPYELALASTMVDVILNHDLDLLHVHYAIPHASAAYM
                     AKQIVLKTGRSIPVITTLHGTDITLVGRDKTYEPVVTFSINESDAITAVSENLKEETY
                     RSFAITKDIQVIENFVDNSRYNKKPIDAFRKVIAPNNEKIIIHASNFRKVKRVEDVIR
                     IFANVHEKLRAKLLLVGDGPERRSMEDLGRQLQVQDDVRFLGK"
     gene            924..2318
                     /locus_tag="VEV83_04260"
     CDS             924..2318
                     /locus_tag="VEV83_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYK44356.1"
                     /translation="MKSFLVALFFCPLLATSQHYDSDLKSDSLFIHKIAVNILSSDAP
                     YNNLHYLTKNIGGRLAGSPQMVLAEQWGYTALKEAGADNVILQECMVPHWVRGGKDRA
                     FVIYKDEHGSQQAYNLNVLALGNSIGAGDVGIHAPLIRVNNFDELEAKKHDVKGKIVF
                     YNNPFDDTLINPFSAYGKNVVYRSDGASRAAKYGALGVMIRSMTNTPGNYPHTGSLHY
                     SDSAQKIPAAAMGLEDVKKLNELFDKNIPVAASLFTYGYMLPDTIGHNVIGELTGSEH
                     PEEIITVGGHLDSWDPAEGANDDGTGVVQTIEVLRTFVALGYRPKHTIRFVLFANEEN
                     GTRGAKKYAEEARTKKEKHIFAFESDAGGFTPRGFGFDVADSTWKKLNEWKVLFIPYY
                     GDRFEKGGDGADIGPLKENFKTPLAGLFPDSQRYFYIHHAATDVFENVDIREMKLGAI
                     NMAALIYLVDKYGL"
BASE COUNT          645 a          513 c          568 g          622 t
ORIGIN      
        1 tgtttaccaa gaaaacgcac atcgtcctgc acctgcagct ggcgtccgag gtcttccatg
       61 ctgcggcgct ccggcccgtc gcccaccagc aacaattttg cacgtaattt ttcatgcacg
      121 ttcgcaaaga tgcgtatcac atcttcaact ctttttacct tcctgaagtt cgatgcatga
      181 ataattattt tttcattgtt cggcgcgatc acttttctaa aagcgtcgat gggtttttta
      241 ttgtaacggc tgttgtcaac aaagttttcg atcacctgta tgtccttcgt gatcgcgaat
      301 gagcgatacg tttcctcttt gagattttcg gaaacagcag tgatcgcatc gctttcgttg
      361 atggaaaacg taacaacggg ttcatacgtc ttgtcacgtc caaccagggt gatatcagtg
      421 ccatgcaacg tagtaataac agggatactt ctcccggtct tcaaaacaat ttgtttggcc
      481 atatacgcgg cagacgcgtg cggaattgcg tagtgcacat gcagcaggtc aaggtcgtgg
      541 ttcaggatca catctaccat tgtgcttgca agagccagtt catacggcgg gtaatcgaat
      601 agcggataag ttggcacgct cacttcatgg taaaaaatat ttgcgctgaa gatattcaac
      661 ctgacgggct gctggtatgt tatgaaatga acctggtgac ctttgtcggc aagcgctttt
      721 cccaactctg ttgccagtac accgcttccg ccataggttg gataacaaac tatacctata
      781 cgcatgcaat ctaattttca gcaaagtaac gatgtattgc gataggtaag gagccgcttg
      841 tcatggaaaa ctaatcgatt cgcttgcgct ccttcagttc aataaactct ttattttcgc
      901 atctttcaaa aacaaaagaa ctaatgaaaa gttttttggt ggcgttattt ttttgtccac
      961 tattagccac ttcccagcat tacgatagcg acctgaaaag tgattctttg ttcattcaca
     1021 agatagcagt gaatattctt tcgagtgacg caccttataa caatctccac tatctcacaa
     1081 aaaatatcgg cggccggttg gcaggatcac cgcaaatggt cctcgcagaa caatggggat
     1141 atactgcatt aaaagaagcc ggtgctgata acgttatcct gcaggaatgc atggtgccgc
     1201 attgggtgcg cggtggaaaa gaccgtgcgt tcgttattta taaagatgaa catggaagtc
     1261 agcaggcata caatctcaac gttctggcgc tgggcaattc gatcggtgcg ggcgatgtgg
     1321 gtatccatgc gccgctgatc cgtgtaaata atttcgatga actggaggca aagaaacacg
     1381 atgtgaaggg gaagattgtt ttctataaca atcctttcga tgatacattg atcaacccgt
     1441 tttctgccta tggaaaaaat gtagtgtacc gctccgacgg cgccagccgt gcagcaaaat
     1501 acggtgcgct cggggtgatg atccgcagta tgacaaacac gcccggcaat tatccgcaca
     1561 cgggctcact tcattacagc gattcagcgc aaaaaattcc tgcggctgcg atgggacttg
     1621 aagacgtaaa aaaactcaac gaactattcg ataaaaatat tccggtagcc gcctctttgt
     1681 ttacttatgg atacatgttg cccgacacaa tcggccacaa tgtgataggt gaactcaccg
     1741 gcagcgagca cccggaggaa ataataaccg ttggtggcca tcttgacagt tgggatccgg
     1801 cagaaggtgc aaatgatgat ggcaccggtg tggtacaaac gatcgaagtg cttaggacat
     1861 tcgtagcatt gggttatcgc ccgaaacata cgatacgttt tgttttgttt gccaacgaag
     1921 agaatggcac acgtggcgca aaaaaatatg cggaggaagc aaggacgaaa aaagagaaac
     1981 acatcttcgc atttgaaagc gatgcaggcg gttttacgcc gagaggcttt ggattcgatg
     2041 ttgccgacag tacatggaaa aaattaaacg aatggaaagt cttgttcatt ccttactacg
     2101 gagaccgttt tgaaaaaggc ggtgacggcg cggatatcgg acctttaaaa gagaatttca
     2161 aaacgccgct ggcggggttg tttcccgaca gccaacgcta tttttatatt catcacgcag
     2221 caacggatgt ttttgagaac gttgatatac gcgaaatgaa actcggcgcg atcaatatgg
     2281 cagcgttgat ctatttggtg gacaagtatg ggttgtgagg atgaatgatg cttgatgaat
     2341 catgagta
//
LOCUS       DASQJI010000142         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1548767,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000142 DASQJI010000000
VERSION     DASQJI010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548767"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..>1537
                     /locus_tag="VEV83_04265"
     CDS             91..>1537
                     /locus_tag="VEV83_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYK44357.1"
                     /translation="MSSIKQLAGQTFWYGLSSIAARFINYLLTPYLTYSAIITKADYG
                     QMGAIYAAIPLFNSLFTYGMETTYFRFMQRTENKEAVNNTATISLLVSSIVLSILLWM
                     NQGWVAKVTTLQDFPVLIQLSIFIIGLDALCTIPFARLRYEGRPRLFAFIKISAIILN
                     VAFTIFFLSYCPAKAKADPNSWAAFVYRPDVNPISYVLLANVMQSLFCLICLSKWMLP
                     KKWKFDLPLWTSMMIYTIPMLVAGLGGMVNETFDRLMLGWWLPGSNDFADEQRGIYNA
                     CYKLSILITLFIQAFRMGAEPFFFKQAEHENPQRVYARVTKFFVITVSVMFLAVTLFL
                     PAWKYFIDPKYWEGLRVVPILLLANMSLGIYYNLSIWYKITNKTMAGAAITFIGVAIT
                     FAINYFFIPRYSYMASAWATFLCYFSMMVISYVWGQKNYYVPYAWKKLLAYMIIALLL
                     FFLHRALSGLYQNTIFELGLAVILISLFALLI"
BASE COUNT          394 a          324 c          353 g          466 t
ORIGIN      
        1 cgggggaata ttaacttgtt gccagttgcc ggttaccagt ctccggtaac tggtaacagt
       61 ctcataccta tttttgcgaa aattttttag ttgagcagca taaagcaact ggcaggacaa
      121 acattttggt atggattaag cagcatcgcg gcacgtttca tcaattatct tcttacacca
      181 tatctcacct actcggcaat aatcacaaaa gctgattatg gacaaatggg cgcgatctat
      241 gccgccatcc cgttatttaa tagcctgttc acgtacggaa tggaaacaac gtatttccgc
      301 ttcatgcagc gaacagaaaa taaggaagcc gtcaacaaca ctgcgaccat tagtttgttg
      361 gtaagttcca tcgtgctcag cattttatta tggatgaacc agggctgggt ggcaaaagtg
      421 acgacgctcc aggatttccc ggtgctcatt caactgagca tttttattat cggtcttgat
      481 gcactctgca cgatcccgtt cgcaagatta agatatgaag gaaggccacg tttatttgca
      541 ttcataaaga tatctgcgat cattctcaac gttgcgttta cgatcttctt tttaagttat
      601 tgcccggcga aggccaaggc tgatccaaat agctgggctg catttgtgta ccgccccgac
      661 gtaaatccta taagttacgt gctgctcgca aatgtgatgc agtcgttatt ttgcttaata
      721 tgtttaagca aatggatgtt gcctaaaaaa tggaaattcg atcttccttt gtggacgagt
      781 atgatgatat acacgatacc catgctggtc gcgggacttg ggggtatggt gaatgaaaca
      841 tttgatcgtt taatgctggg atggtggcta ccgggttcga atgatttcgc agatgagcaa
      901 cgaggcattt acaatgcttg ttataaactg tcgattctga taaccttgtt catccaggca
      961 ttcaggatgg gagcggagcc attctttttc aagcaggcgg agcacgaaaa tccgcaaagg
     1021 gtttatgcgc gcgtcacaaa attttttgtg atcactgttt cagtcatgtt cctagcggtt
     1081 acattgttcc tcccggcctg gaaatatttc atcgacccaa aatattggga agggcttagg
     1141 gtggtgccca tacttttatt agccaatatg agcctcggca tctattataa cctcagcatc
     1201 tggtataaga tcacaaacaa aacgatggcg ggtgcagcga tcacgttcat cggggtggcc
     1261 atcacatttg caataaatta tttcttcatt ccgcggtaca gttatatggc atcggcctgg
     1321 gcaaccttcc tgtgctattt cagcatgatg gtgatcagtt atgtatgggg acaaaaaaat
     1381 tattacgtgc cgtatgcgtg gaagaagttg cttgcataca tgatcattgc gttgctatta
     1441 tttttcttac atcgtgccct ttcggggttg taccaaaaca caatttttga acttggtctt
     1501 gcggtgatcc tgatctcgct ttttgccttg cttattg
//
LOCUS       DASQJI010000143         4022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2470253,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000143 DASQJI010000000
VERSION     DASQJI010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2470253"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..529
                     /locus_tag="VEV83_04270"
     CDS             149..529
                     /locus_tag="VEV83_04270"
                     /inference="COORDINATES: protein motif:HMM:NF021525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2255 family protein"
                     /protein_id="HYK44358.1"
                     /translation="MMKKFSRAFLKCVNETQITSVRAGADRTKFTGIWMVVVNGRIFS
                     RSYYGAVKSWYTSLLTAEYGEIKCAKDIVAVRGIKPSDLKEITEAINKAYEKKYLTRP
                     SNKKWVDGLNDPERIARTMEFIAT"
     gene            659..841
                     /locus_tag="VEV83_04275"
     CDS             659..841
                     /locus_tag="VEV83_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44359.1"
                     /translation="MKKEVTQHAPHSAVYGLGFIGAAVYYISNATSFGLGILGFLKAI
                     VWPAFLVYDAFKALNG"
     gene            complement(851..1174)
                     /locus_tag="VEV83_04280"
     CDS             complement(851..1174)
                     /locus_tag="VEV83_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44360.1"
                     /translation="MKTKTFNQEILLMTNTTFARREWCEKSQNNGRDPSAIDQLEEAC
                     WNGMLESLLPGIMERTASGRRLFLWQVVPYNSFLEIELCESPFYGQIELSINPYLFLG
                     DMTAN"
     gene            1473..2072
                     /locus_tag="VEV83_04285"
     CDS             1473..2072
                     /locus_tag="VEV83_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK44361.1"
                     /translation="MRSLFLCSLLFLSLFVSGQTKEKLFNGKDLTGWKIHGTEKWYVE
                     NGELVCESGPDKQYGYLSTNKNYKDFILTLEFKQEANGNSGVFFRSQIPEGVKISGWQ
                     AEVAPAGQHTGGIYESYGRGWLVQPRPEDEKVLKMGEWNLYKIQVNGDEVTTWLNGQQ
                     MCYIKDEKIGQGEGFIALQIHEGGGIKVRWRNIEIQELQ"
     gene            2137..3420
                     /locus_tag="VEV83_04290"
     CDS             2137..3420
                     /locus_tag="VEV83_04290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK44362.1"
                     /translation="MNARTSNASWHPAKKVLFRFCFLYFVIYCFPFPLDAFEFTKPLA
                     QPFYNFLDWLIPIVAKKFQLNAVPAFPMFDKLDDSNYGLAFCYLNLIISATVAIVWTL
                     LNRKRGQYENLYQWLRLYLRFFLAAYLFGYGFVKVFPSQFQAITASRLASTVGDESPM
                     LLAWNFMGYSNVMMRLNGIAEVLAGLLLLFRRTTTIGAILSAGVFSFVVTMDFCFNVP
                     VRMLASHLLIISAFLTLDDSRRLLNIFFLNRPTATTVYAPLIAQPRGRKIFFAVQTVL
                     AVCILYSGIASALEAQKEYGWNPNPTDVPLYGVYNTTYFIRNSDTIPAIETDSLRWKE
                     MVIDGGNWQRSGIIEFVSGKKLFCDISADTTKKIINIQSKADTSEKYSLNYLENGNQI
                     LFKGKWEQDSIEALMTKYDLNNYLLHREKFSWIKQ"
     gene            3525..>4022
                     /locus_tag="VEV83_04295"
     CDS             3525..>4022
                     /locus_tag="VEV83_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK44363.1"
                     /translation="MERRKFIKSTATISAFTILKPHIVFGTNANSAIRIGVIGCGNRG
                     TAVISSMSANTNSNIIAIADLFNDKLSAAEKNFNQLNAFKSFPALNKQNIYKGSKAYM
                     RLLEKKDVDAVLISSPAYSHVDFLEAAVAAGKHVYCEKPVATDVDGCRRVIAAGEKLN
                     GKQSVV"
BASE COUNT         1175 a          839 c          899 g         1109 t
ORIGIN      
        1 accttcattc gatatggcgg caaccatttc aggcgttgta acgccaagca tcggcgcctg
       61 cactaaaggg taatcgacag acaaaatttc ggttaaagtg tttttcagct tcatgatggg
      121 gcaaagttat tcagcttaat aactttgaat gatgaaaaag ttttcaaggg catttcttaa
      181 atgcgtaaac gaaacacaga tcaccagtgt ccgcgccgga gctgacagaa caaagtttac
      241 gggcatttgg atggtggtag tgaatggaag gatctttagc cgttcgtatt atggcgcggt
      301 caaaagctgg tacacaagtc ttttgaccgc cgaatatggt gagataaaat gcgcaaaaga
      361 tattgtagcg gtgcgtggta ttaaaccgtc agacctcaaa gagatcactg aagcgatcaa
      421 caaagcttac gagaaaaaat atttaaccag gccatctaat aaaaaatggg tagatggatt
      481 gaatgatccg gaaagaatag cgagaacaat ggaatttatc gcgacctgag agttgaaccg
      541 ttcgaaaaag gatttacaat gaataacggc acaagcgctg ttgatatcta tcatcggcag
      601 gtttgacatt gatcatcggt ttttaactca tgatttgtga gttttatgca aaaaggcgat
      661 gaaaaaagaa gtaactcagc atgcgccaca cagcgcggta tacgggttgg gatttatcgg
      721 tgccgccgtt tattacatct ccaatgcaac aagctttggg cttggcattc tcggttttct
      781 taaagcaatt gtatggccag cgtttcttgt gtatgacgct ttcaaggcac tgaatggata
      841 gcgcgaaaat ttagttggcg gtcatgtcgc ccaaaaataa ataaggattg atggaaagtt
      901 ctatttggcc atagaaaggt gattcgcata gttctatttc caaaaacgaa ttgtacggga
      961 caacttgcca aagaaataat cttcttcccg atgccgttct ttccatgatc cctggcaaca
     1021 aactttcgag catcccattc cagcaagcct cttcaagctg gtcgatcgct gaaggatccc
     1081 ttccattatt ttgacttttt tcgcaccatt ccctgcgggc aaatgtcgtg tttgtcatca
     1141 gcaggatctc ctggttaaac gtttttgttt tcatgaccga tagtttaagt ggtgcgaaat
     1201 ttttgtctct gaatacagat caaaattcat gtaccatcgt gccgaaaaaa gaataaacta
     1261 ttacgaactg taataaacaa gcaacaaagc ggtaaataat gctgatgaat agcagatcgg
     1321 gcagagcgcg cggttctggt gaaacaaaaa cgttgttcgc ttttgacaca atactgttca
     1381 aaatcgatat aagtcccaaa cggacgcaca cactacgccg gcttgtgtga aaaaaaacat
     1441 ttgtttcatt atattcgtga aaacagatca gcatgcgatc actgtttctt tgctcgcttt
     1501 tatttttgag cctcttcgta tccggtcaaa caaaagaaaa gttgttcaac ggaaaagacc
     1561 tcacagggtg gaagattcac ggcactgaga aatggtatgt tgagaatggc gaactggttt
     1621 gcgaaagtgg ccctgacaaa caatatggct acctgtccac caataagaat tataaggatt
     1681 ttatccttac actggaattt aagcaggaag caaatggcaa cagcggagtt ttttttcgct
     1741 cgcagattcc cgaaggcgta aagatcagcg gatggcaggc ggaagttgca cctgcgggac
     1801 aacacaccgg tggcatttat gaatcatatg gaagaggctg gcttgtgcaa ccgagacccg
     1861 aagatgaaaa agttttgaaa atgggcgaat ggaatcttta taagatacaa gtgaacggtg
     1921 atgaagtcac gacatggctt aacgggcagc aaatgtgcta catcaaagac gaaaagatcg
     1981 ggcagggaga aggttttatt gccttacaaa tacatgaagg aggtggaata aaagtacgat
     2041 ggagaaatat tgagatacaa gaactgcaat agcgtctggg gaacggcttg atctcattct
     2101 gaaattacct aacggctgca tggtaaactg cttactatga acgctcgaac gtcaaatgct
     2161 tcatggcatc ctgcaaaaaa ggtcttgttc cgtttctgct ttctgtattt tgttatctac
     2221 tgttttccct ttccattaga cgcatttgaa tttacaaaac cgctcgcgca accgttttac
     2281 aacttccttg actggctcat tcctattgtt gcaaagaaat ttcaactgaa cgccgttccc
     2341 gcattcccca tgtttgataa gcttgatgac agcaactacg gccttgcctt ttgttatctc
     2401 aacctcatca tttcagcaac cgtcgcgatt gtgtggacgc tgttaaaccg taaacggggc
     2461 caatatgaaa atctttatca atggctcagg ctttacctgc gtttctttct tgcggcgtat
     2521 ttgtttggat acggatttgt aaaagttttt ccatctcaat tccaggcgat caccgcttcg
     2581 aggctggcat caacagtcgg cgacgaaagt ccaatgcttc tcgcctggaa tttcatgggt
     2641 tactcgaacg tgatgatgcg gctcaacgga attgcggaag tgctggccgg gttgctatta
     2701 ttgtttcgcc gcaccactac gatcggcgca attttatcgg ctggcgtttt cagttttgtc
     2761 gtaacgatgg acttctgctt caatgttccg gtaagaatgc tggcctcaca cctgcttatc
     2821 atctccgctt ttttgacgct ggatgatagc aggagactgt tgaatatttt ttttctcaac
     2881 aggcccaccg cgacaaccgt gtatgctccg ctcatcgctc agcctcgcgg acgaaaaata
     2941 tttttcgcag tgcaaacagt actcgctgta tgtattttat attccggaat tgctagtgca
     3001 cttgaagcgc aaaaagagta tggctggaac ccgaatccga ctgatgtgcc tctttatgga
     3061 gtttataaca caacctattt cattaggaac agcgatacta ttccggcaat agaaaccgat
     3121 agccttcgct ggaaagaaat ggtgatcgac ggcggcaact ggcaacgctc cggcatcatc
     3181 gaatttgtat ccggcaaaaa acttttttgc gacatcagcg cagacactac aaaaaagatc
     3241 atcaacatcc agagtaaagc cgatacttct gagaaatatt cgctgaatta cttggaaaat
     3301 ggtaaccaaa tcttattcaa aggcaagtgg gaacaagaca gcatcgaagc attaatgacg
     3361 aagtacgatc ttaataacta tttgcttcac cgcgaaaaat ttagctggat caagcaataa
     3421 acatttttgg catcgcagct ttctgaacat tttttgcata cgttcatctt ttgaaataat
     3481 ttgggtttcg actacacttg ttataatcgt taaacgtcac cattatggaa cggagaaaat
     3541 ttataaaaag cactgctacg atctctgctt ttacgatcct gaaaccacat atcgttttcg
     3601 gcacgaacgc aaactctgct atcaggatcg gtgtgatcgg ctgtggaaat cgcgggacgg
     3661 ctgttatctc gtctatgtcc gcaaacacta atagcaacat tatcgccatt gctgatcttt
     3721 tcaatgataa attgtctgca gcagaaaaaa atttcaatca actgaatgca tttaaaagtt
     3781 ttcctgccct gaacaaacaa aatatttaca aaggctcaaa ggcctatatg agattgcttg
     3841 agaaaaaaga cgtggatgct gtgctcatct cctcccctgc ctacagtcat gttgattttc
     3901 ttgaagctgc ggtagctgcg ggcaagcacg tgtattgcga aaagcccgtc gccaccgatg
     3961 tggatggatg caggcgtgtg attgcagccg gtgaaaaatt gaatggcaaa caaagcgtcg
     4021 tt
//
LOCUS       DASQJI010000144         7483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1548946,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000144 DASQJI010000000
VERSION     DASQJI010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7483
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548946"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VEV83_04300"
     CDS             <1..249
                     /locus_tag="VEV83_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44364.1"
                     /translation="NAEDPTVARPSIDELKKYWSQINSRLTEHFKTMEPADWFSRHML
                     VSEEDFSKEPHRNKLNVLINRTAHQSYHLGQMAYLRKV"
     gene            complement(267..1883)
                     /locus_tag="VEV83_04305"
     CDS             complement(267..1883)
                     /locus_tag="VEV83_04305"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HYK44365.1"
                     /translation="MRKMITYPAAFFFLSLISSNAFAQQPTVAWAARYNGPDNKVDNA
                     REMDLDGSGNVYVTGTSATKNGSVYIATVKYNAQGIQQWVARYSGPVSGDNYPYALTT
                     DANGNVYVTGRSIGNNSTYDIATVKYNSSGVQQWAARYNGTANANDVPGDLKVDAAGN
                     VFVTGLTDGQYINNGNAIVTLKYNALGQQQWVAKYDQLPNGPNSNSEQGNSLAIDANG
                     NIYIVGTSAGMVTIKYGTSGQSVWVRNITNVEGRKVLIDGANNIVVSSFNSTIVKYDA
                     GGNLIWQNNASNPSAAFWDMTLDAADNIYVTGECTGTNGHSDYITGKFSSDGTQQWLV
                     PFNGSLNDLDFARSIALDGAGNVYVTGRCSVANGTRTGGVNFGTVKYDNNGVQQWVQL
                     YDSPDKSGSDAFVVLTDAANNVYVTGASATKSTSYDYATIKYSQGNGLNSTTDVLNKT
                     RSVNFGLHNYPNPVHQNTIIKYELPKDAKVKLIIYDVRGNLLATMVNETQAAGIHTVG
                     FSANHLLAGTYYYRLESEGSTETKKMIISK"
     gene            2269..4554
                     /locus_tag="VEV83_04310"
     CDS             2269..4554
                     /locus_tag="VEV83_04310"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44366.1"
                     /translation="MNDDSFSLCLIKRRCFSRSVIKAISRAFLLCLFLVSSTAVAFAQ
                     NNAVIDSLKLVLRNTSNDSTKLVLMYKIGWQYAWAGQYQSQHHYAEAIIKLAEKINNI
                     PYLARGYYDLGIYFNSVDNYDQAMFNTNRALQLFAECHDTLGMASVYQRLGLYQAANH
                     KSNAIENYKTASRLFLAIGQPSDAATVEDAIGSLYFDINNFSESVKHVALSLKYFEND
                     KEQEGYINPLNLYRMQGYYDEILQLYLRKLNEFEKSGYVTTMRIGRIKIVIGNVYNEK
                     GDYEKAIRYLTEGIASFRNKVPVVVLPVYEGLAKAYLMKVRDPAAARMYNYTFTDSAV
                     RNATKALQLATGLHDKESMEECTVLLASAFLERAKYSGKKGDLLNALHLFGKIKLPAG
                     TYRNKMLMRDAYAGMAEVYSSLGDYKRAFQLSKYSSRLKDSITNDDNAIKMERLRLQV
                     EVDKTVETERAESQKLLYEEQMRHRNAMAEQKRSEDRLLSLKEAKTNRILAAGGLLLV
                     TGFFSVLFFRQRSAKNRALEKAETLHRMTELELQSLRAQLNPHFMFNSLNAIQELILL
                     EDNERSHIYLSAFADLLRMLLDNADQPFISLESEIAFLKLYLSLENLRIPDLNYSIEI
                     DPAIDAERTMIPNMLFQPYIENAIWHGLAHKKGDRRLQITVDERDNAMIFQIMDNGIG
                     RKKASELKSIYRKKHRSKGMELLSKRFSLLSKEYAAKIETSITDVYANGEAAGTLVQI
                     VVPSFLSEKFEASFYGAHNHN"
     gene            4532..5296
                     /locus_tag="VEV83_04315"
     CDS             4532..5296
                     /locus_tag="VEV83_04315"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK44367.1"
                     /translation="MVRTIIIDDEPSAINVLSIFLKKKFKDDVEVIATSTSAAEGKEL
                     IEKLRPDLVFLDIEMPGISGIDLVRSCTNTDFRLVFVTAYDTYAVEAFELSALDYLLK
                     PVSAEKLYRVMEKIKAEPGNSRDRLNAQLQKLEKILKLQSAGHEKISISTADKIIFIN
                     ISEIIYCEASGAYAHVHLCSGKNIFTSRTLGDFESQLSSENFFRIHNSFLINLNRIKE
                     FQRNEGSYVLMENNIKLAVSQRRRKDFLDAIEKFVL"
     gene            5469..6527
                     /locus_tag="VEV83_04320"
     CDS             5469..6527
                     /locus_tag="VEV83_04320"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HYK44368.1"
                     /translation="MANSRITELLADKAEYLLNYTSNTIDRSQLHFPGPDHIDRIWSQ
                     SNRNNQVLRSMQQLLGSGRLANTGYCNIFPVDQGIEHSAGASFAPNPIYFDPENIIRL
                     AVEAGCNGVASTFGVLGIMSRKYAHRIPFIVKINHNEFLSYPNKFDQTLFGSVKSAWN
                     MGAVGIGATIYWGSAESARQLKEIAEVFEFAHELGMMTILWCYTRNNAFKVEGVDYHT
                     SADLTGQANHLGVTIQADIIKQKLPTNNGGYLATKHGKTHKLVYEKLTTDHPIDLCRY
                     QVINCYMGRVGLINSGGESKGASDLADAVTTAVVNKRAGGMGLILGRKAFQRPFTEGV
                     EMLQSIIDVYLDKSITIA"
     gene            6586..>7483
                     /gene="accD"
                     /locus_tag="VEV83_04325"
     CDS             6586..>7483
                     /gene="accD"
                     /locus_tag="VEV83_04325"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HYK44369.1"
                     /translation="MNIDREDDLDESLSGEEISKEPPASGEARTKWYRRLRKGITTST
                     AEKREMPEGLWSKCPECHYICTTSELKENLYVCPKCSYHHRIGSEDYFEILFDNNTYT
                     ELFDNIRSKDFLGFTDLKSYQKRLDEIHANTNLKDSMRVAVGEMKGREIVTACMDFEF
                     IGGSLGSVMGEKFSRAVDYCIQNRLPFLVISKSGGARMMESAFSLMQLAKTSGKLSQL
                     SDAGLPYISLLTDPTFGGISASFGMLGDFNIAEPGALIGFAGPRVIKETIKKDLPEGF
                     QRSEFLLEHGFLDFIVDRKSLKN"
BASE COUNT         2163 a         1560 c         1689 g         2071 t
ORIGIN      
        1 aatgcggaag atccgactgt tgcaaggccg tcgatcgatg aattgaaaaa atactggagc
       61 cagatcaact cacgtcttac agaacatttt aaaactatgg agcctgctga ttggttcagc
      121 aggcacatgt tggtttccga agaagatttc tcaaaggaac cgcaccggaa taaactgaat
      181 gttcttatca acaggaccgc tcaccaaagt tatcatcttg gccagatggc gtatctcagg
      241 aaagtctgag gaaacaatag caatttctat tttgagatta tcattttttt cgtttcagta
      301 cttccttctg attccagtcg atagtagtaa gttccggcga gaagatgatt tgcagaaaaa
      361 cccaccgtgt gtatgcctgc cgcttgagtt tcatttacca tcgtcgcgag caggtttccc
      421 ctcacatcgt aaatgatcag cttaactttt gcatcctttg gcaattcata ttttatgata
      481 gtgttttggt gaaccgggtt aggatagtta tgcaaaccaa aatttactga ccgcgtttta
      541 tttaaaacat ctgtggtaga gttcaagccg ttaccttgtg aatacttgat tgtcgcataa
      601 tcataggatg tggatttggt agcacttgca cctgttacgt atacattgtt cgcggcatct
      661 gttagtacaa caaatgcatc gctcccgctt ttgtcagggc tatcatatag ttgtacccat
      721 tgctgcactc cattattatc gtatttcacg gtgccgaaat tgacaccgcc tgtccgggtt
      781 ccattagcaa ccgaacaacg gcccgttaca tatacatttc ccgcaccatc taatgcgatt
      841 gatcgtgcaa aatcgagatc atttaacgat ccgttgaatg gcacgagcca ttgctgtgta
      901 ccgtctgaac taaattttcc tgtgatataa tcggagtgac cgttggttcc tgtacattca
      961 cccgtcacat atatattgtc tgccgcatct aatgtcatgt cccaaaatgc tgcggaagga
     1021 tttgacgcat tgttttgcca aatcaagtta ccgccggcat cgtacttaac aatggttgaa
     1081 ttgaagcttg agaccacgat attgtttgcc ccgtcaatca gcacctttcg gccctcaacg
     1141 tttgtaatat ttcgaaccca tacactttga cctgatgtac catattttat agtgaccatc
     1201 cctgcgctgg ttcctactat ataaatatta ccgtttgcat caatggcaag tgaattaccc
     1261 tgctcgctat ttgagttggg accgttgggt agttggtcat atttcgctac ccactgctgc
     1321 tgccccaatg cgttatattt tagagttaca atagcgttac cattgttgat atattgacca
     1381 tcagtaagac ctgtgacaaa tacattgccg gctgcatcca ctttcagatc accgggcaca
     1441 tcatttgcat tcgcggtgcc gttgtacctt gctgcccatt gctgcacacc tgatgaatta
     1501 tatttgactg tagcaatatc gtaggtggaa ttgtttccga tactacggcc ggtaacataa
     1561 acatttccgt tggcgtcggt tgtcaacgca taaggatagt tgtcgccact gacaggtccg
     1621 ctgtaccgcg caacccattg ctgtatacct tgggcattgt acttaacggt tgcgatatag
     1681 accgaaccat ttttcgtcgc gctggtacca gtcacgtaaa cattaccact cccgtctaaa
     1741 tccatctctc gggcattatc cactttattg tcgggcccgt tataacgggc tgcccatgca
     1801 acagttggct gttgtgcaaa agcgttagaa gaaataagag acagaaagaa aaacgcggcc
     1861 gggtatgtga tcatctttct catttgtatt agtttttgat gcgcaatttt aaaaagaagg
     1921 catagttgaa taattatcat cgggatttaa aactatttta ttcacccgtg cagcgcaagg
     1981 ggtatttagt aactgccgtc aacgagtttg caggcgatta ttaatgccgg ctaaacgtat
     2041 gcgagcgttc ttgatgaaat acgtatcgag cagcgcgcca cgcagttaaa atttatttta
     2101 ctgaggccaa taaaataaag tcgcttgttc gtttaatttc acaacagttt atatatttac
     2161 tcatctcttc gccgccgatc aacaattttt ttaatggtaa atattcggtc tttcttcctg
     2221 gtgaaggcgg actgaataaa aagaataata acgggtaaca tccaggcgat gaacgatgac
     2281 agcttttctc tatgccttat aaaacggcga tgcttttccc gctccgtcat aaaggcaatc
     2341 agccgtgcgt ttttgctttg tctctttttg gtttcttcaa ctgccgttgc gtttgctcaa
     2401 aacaatgcgg ttatcgactc gcttaaactt gttctgcgaa acacttctaa cgacagtacg
     2461 aagttggttt tgatgtataa gattggttgg caatatgcat gggcaggcca gtatcagtca
     2521 cagcaccact atgctgaggc aatcatcaaa ctggctgaaa aaataaacaa cataccgtac
     2581 ctggcaaggg gctactatga cctgggcatt tactttaatt ccgtagataa ctacgaccag
     2641 gctatgttta ataccaaccg ggcactgcaa ttatttgctg aatgtcacga tacgttggga
     2701 atggcctctg tgtatcaaag actggggcta tatcaagctg cgaatcacaa gagcaacgcg
     2761 attgaaaatt ataaaacagc atcgcgattg ttcctggcga ttggccaacc gtcggacgct
     2821 gccaccgttg aggacgcaat tggctcgttg tattttgata tcaacaattt ttctgagtct
     2881 gtaaaacatg tagcactatc attaaaatat tttgaaaatg acaaagagca ggagggttat
     2941 atcaatccat taaacctgta ccggatgcaa ggatattacg atgaaatttt gcagctctat
     3001 ttgcgcaaat tgaatgagtt tgaaaaatct ggttatgtta ccacgatgcg gatcggccgt
     3061 attaaaattg tcatcggtaa tgtatacaac gaaaagggcg actacgaaaa ggctatcagg
     3121 tatttgaccg aaggcatcgc ttctttcaga aacaaggttc cggttgttgt acttccagtg
     3181 tatgaaggcc tggccaaagc gtaccttatg aaggtgcggg atcctgcagc tgccagaatg
     3241 tataattaca cttttactga ttctgcggta cggaatgcaa ccaaggcgtt acaactggct
     3301 acgggtttgc acgataaaga gtcaatggag gaatgtacag tcttacttgc cagcgcattt
     3361 ttagagaggg cgaaatatag tgggaaaaaa ggagacctct taaatgcgtt gcatttgttt
     3421 ggaaagatca agcttccggc tggtacctat agaaataaaa tgcttatgag agatgcttat
     3481 gccgggatgg ctgaagtcta ttcaagttta ggagattaca aaagggcgtt tcaattatcc
     3541 aaatattcgt cgcgattaaa ggattctatc acaaacgatg ataacgcaat taaaatggaa
     3601 cgacttcgtc tgcaggtcga agttgacaaa acggtagaaa ctgaaagagc agagagccaa
     3661 aaacttttgt acgaggaaca aatgcgccat cggaatgcaa tggcggagca aaaaagaagt
     3721 gaagatcgac tgttaagttt gaaggaagca aaaacaaacc gcatactggc ggctggcggg
     3781 ttattgcttg taaccgggtt tttttccgta ttgtttttcc gtcagcgatc cgcaaaaaac
     3841 cgggctcttg agaaagctga aactcttcac agaatgacag agctcgaact gcaaagtttg
     3901 agggcgcagc ttaatcctca cttcatgttc aattcattaa atgcgatcca ggaacttatc
     3961 cttctcgaag acaatgagcg ttcgcatatc tatctatctg cctttgcaga cctgctaaga
     4021 atgcttcttg acaacgcaga tcagcctttt atttcattgg agagcgaaat tgcatttttg
     4081 aaactttatc tttcgctcga aaatcttaga attcctgacc ttaattattc tatcgaaatt
     4141 gatccggcta tcgacgcgga aagaacgatg atcccgaaca tgcttttcca gccgtatata
     4201 gagaatgcta tctggcatgg tcttgcacat aaaaaaggtg acaggagact gcaaataaca
     4261 gtcgatgaaa gggataacgc aatgatcttt caaatcatgg ataatggaat tgggcggaag
     4321 aaagcatcag agcttaaaag catttatcga aaaaaacatc ggtcaaaagg catggagttg
     4381 ttgtcaaaac gtttcagcct gttgtccaaa gaatatgctg caaaaattga aacttcgatc
     4441 actgatgtat atgcgaacgg agaagccgca ggcacattgg ttcaaattgt agttccttcc
     4501 tttttatcag aaaaattcga agcaagtttt tatggtgcgc acaatcataa ttgacgacga
     4561 accttctgca atcaatgtgc tgagcatatt cctaaagaaa aaatttaagg atgatgtaga
     4621 ggtaatcgcg acgagtactt cggctgctga aggaaaagag ctcatcgaga aattgaggcc
     4681 tgacctcgtc tttcttgata tcgagatgcc cggaatatca gggatcgacc tggtgcgtag
     4741 ttgtacaaat accgactttc ggctcgtctt tgttacggct tacgatacct atgcggttga
     4801 agcgttcgag ttaagtgcgt tggactattt actgaaaccg gtgagcgccg aaaaactgta
     4861 ccgggtcatg gaaaaaataa aggcggagcc cggcaatagc cgcgatcggt tgaatgccca
     4921 attacaaaag ctggaaaaaa ttttgaaatt gcaatcagcc ggtcacgaaa agatctcaat
     4981 aagtaccgca gacaagatca ttttcataaa catatcggaa atcatttatt gcgaagcaag
     5041 cggtgcgtat gcacacgttc acctgtgcag cggcaagaac attttcacat caagaacact
     5101 tggtgatttt gagtcgcagc ttagcagcga aaattttttc cgcattcaca attcattcct
     5161 gatcaatctt aatcgtatta aggagtttca acggaatgaa ggctcctatg tgctgatgga
     5221 aaacaatatc aaactggcag tttcacagcg gaggcgaaaa gactttttag acgcgataga
     5281 aaaatttgtt ttatgaccaa tcgcagctct tctattcaga tttcgagggt cggatgtttc
     5341 gtttcacgag cttaaaatca gcggaagaaa tttgaaattt tgaagaaatt ctttaaaaat
     5401 atactgccta tatttgttcc ccacagtaaa agcaaactgc tgtcaacaaa acttattaat
     5461 ttttaatcat ggcaaactcc cggataacag aactgcttgc cgacaaagcg gaatacctgt
     5521 tgaattatac aagcaatact atagaccgtt cgcaattgca ttttcccggg ccggatcata
     5581 ttgaccggat ctggtcacaa agcaatcgca ataaccaggt tttgcgtagt atgcagcagc
     5641 ttttaggaag tggcaggttg gcaaacaccg gctattgcaa catttttccc gttgaccagg
     5701 gcattgagca cagcgccggt gcttcgttcg cgcctaatcc gatttatttc gatcccgaaa
     5761 atattatcag attggcagtt gaagccggct gtaatggagt ggcttcgaca tttggcgtcc
     5821 tgggaattat gagccggaaa tatgcacata gaattccgtt cattgtcaaa ataaatcata
     5881 acgagtttct cagttatccg aacaagtttg atcaaacttt gtttggaagc gttaaaagcg
     5941 cgtggaatat gggtgctgtt ggtatcggtg caacaattta ttggggaagt gcagagagtg
     6001 ccaggcagtt aaaagaaatt gcggaagttt ttgaatttgc gcatgagctg ggcatgatga
     6061 cgatcttgtg gtgttacacg cggaataatg cgttcaaagt tgaaggtgtg gactaccata
     6121 cgtcggcgga tctaacgggc caggcgaatc atcttggtgt tacaatacaa gcggatatca
     6181 tcaagcaaaa attgccgacc aacaatggcg gttatcttgc cacgaaacat gggaagacac
     6241 ataaacttgt ttacgaaaaa cttacaaccg atcatcctat agatctatgc cggtaccagg
     6301 tgatcaattg ttatatggga agagttggcc tgatcaattc tggcggtgaa agtaaaggcg
     6361 cctctgacct tgccgacgca gttacaacag cggtagtgaa caaacgggct ggcggcatgg
     6421 gcttgatact tggccggaaa gcgtttcagc gtccgttcac tgaaggagtc gaaatgctcc
     6481 aaagtatcat cgatgtttac cttgataaaa gcataacaat tgcctgatta aaaatctaaa
     6541 cgcgcccggt gaaagtcgtt ttgccggcct gcctgagata agcatatgaa tatcgatcga
     6601 gaagatgatt tagatgaatc gctttcggga gaagaaattt ctaaagaacc tcccgcttcc
     6661 ggcgaggcac gtaccaaatg gtaccggcgt ttacgaaagg gaatcaccac gtcaaccgca
     6721 gaaaaaaggg agatgccaga aggactgtgg agtaaatgcc cggagtgcca ttatatctgt
     6781 acaacaagtg agctgaaaga aaatttatac gtgtgcccta aatgcagtta tcatcaccgc
     6841 attggcagcg aggattattt cgaaatatta tttgacaaca acacctacac agaacttttc
     6901 gacaacatac gaagcaaaga ttttcttggc tttaccgatc tgaagtcgta tcaaaaacgc
     6961 ctggatgaaa ttcacgcgaa tacgaatctt aaagacagca tgcgcgtggc ggttggcgaa
     7021 atgaagggaa gagagatcgt tactgcgtgc atggattttg aatttatcgg cggctcgttg
     7081 ggaagcgtga tgggagaaaa gtttagtcgc gccgttgatt attgtattca aaaccggctc
     7141 cctttcctcg tcatcagcaa gagcggtggc gcgcggatga tggaaagtgc attcagcctg
     7201 atgcaactcg caaagaccag cggcaaactt tcccagttaa gtgatgccgg ccttccttat
     7261 atatcacttt taacagaccc cacattcggc ggcatatcgg cgagctttgg catgctcggc
     7321 gattttaata ttgccgaacc gggcgccctc attggttttg ccggccctcg cgtgatcaaa
     7381 gagaccataa aaaaggacct ccctgaaggt ttccaaagaa gtgaattcct ccttgagcac
     7441 ggttttctgg attttattgt tgaccggaag tctttaaaaa ata
//
LOCUS       DASQJI010000145        10792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1395750,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000145 DASQJI010000000
VERSION     DASQJI010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10792
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395750"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VEV83_04330"
     CDS             <1..885
                     /locus_tag="VEV83_04330"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK44370.1"
                     /translation="KEKYASEKIDVEVKAADKNYLSTYGLQLTAGRWFDDNDEHSVND
                     AIPDSLKRYAFVLNETAVKALGFASAQDALGKYVTFGMNDISAPVIGVVKDYNTTSLR
                     DAVKPVLMVEFPFFYYNAGMKLSNGYSAQTLSAIEKAWTSVYPNQLFESNFLDEHIAS
                     LYKNEKRTQQLFNVFTFLSIVINVLGLVGLLSFMIEQKTKEIGIRKVLGASVKDISFI
                     LSKDFLRLIVIAFFIAAPAGWLLMNKWLQDFAYRTTISWWVFVAAVVAALLVTGIAVG
                     FQTIKAAVANPVKSLRTE"
     gene            1020..3407
                     /locus_tag="VEV83_04335"
     CDS             1020..3407
                     /locus_tag="VEV83_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44371.1"
                     /translation="MYKNYFKTAWRNLIKNKIYSIINILGLAAGMAVAMLIAFWIWDE
                     LTYDTYHTNHAQLAQVMTTFIDNDGKQSTGQAVCLPIGDELRTKYGSDFKNISMASWN
                     FGHVLAVGEKKITSSGMWVESNFPSMFSVKMLQGNINALSDPSAILINASLAKTLFGD
                     ANPINKMIRLDNKDNYKVAGVFEDFPHNTTLNDTKLLLPWKKYITTEEWVKEAVTQWN
                     NHSWQAYVQVADNIDMDKETEKIKNVVMVHKNAKTDGLEQAVLFPMDKWRLYSDFKDG
                     KATGGRIQFVWLFSIIGVFVLLLACINFMNLATARSEKRAREVGIRKTVGSFRGQLIR
                     QFLTESIVVAFVSFVFSIIFVLLLMPMFNRLADKNIQVPWTNALFWIIALTFTLITGL
                     IAGSYPALYLSRFQPVKVLKGTFRVGRFASLPRKVLVVVQFTFSIALIIGTIIVFNQI
                     QYAKNRPVNYRSEGLITVMMSTPDLYGHYDAIRSDLLATGVVDNMAESSSPTTNVWSN
                     QIGFNWQGKDPNSLPSFGTIAVMEDFGKTIGWQIKEGRDFSREFATDSLAMVLNESAV
                     KLIGMKRDIVGQTIQFNDRNYTVIGVIKDMIMESPYRPVTPTVFLCNHNWANVITIAI
                     KQGAPVKTALSKIEAVFKKYNPTAPFDYTFNDEDYAKKFADEERVGNLSTFFTILAIF
                     ISCLGLFGLASFVAEQRKKEIGVRKVLGASVYNLWRMLSKEFALLVAISCFIAIPLAW
                     YYLNGWLKQYDYRTPISLWIFIVSGVGALAITLITVSFQAVRAAIANPVKSLRTE"
     gene            3543..5939
                     /locus_tag="VEV83_04340"
     CDS             3543..5939
                     /locus_tag="VEV83_04340"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44372.1"
                     /translation="MFKNYFKTAWRNLVKNKISSSINIAGLTIGLTCCLLIALYIQHE
                     LSFDKFQANGDRLARVIMRYSFDGSSESNEGNFTSVRVAAIFPKTFPEVESAIKMTQY
                     SRVVRYGDKMFDEKNFMYADANFFDIFSFKLLNGNIHDALSMPYDVVLTESTARKYFG
                     SSDPVNRMLRVGNDSNLYRVTAVMQDCPRNSQIQCDFVASFSSLGITKDAEDTYWDAN
                     YTTYLLLKNKDNIASLERKFPAFMKKEMAGEGATVNFHLERFNKIHLYSPYDSFVPNN
                     SITYIYILAAVALLILIIACFTYVNLSTARSLERAREVGVRKVIGALKNQLFWQFINE
                     SFLISLIAVLLSLLLSALLLPFFNSLSNEQLEARSLFSLPFVLFSISVAVMISLLAGI
                     YPALILTKFQPVKVLKGAFKNTASGQALRKSLIVFQFAISVFLIVSTFIVQQQLYFIQ
                     HIKLGYDRDHVVVLPLDNKMLDNLAVIKQQFRQNPGVLSVSSCSTTPVQGGGGFNMRS
                     DIMPADKQIAVTADRVDEDFVSTLGLQIIAGRDLTAQDMKDVSNDDYKKNIFHFILNE
                     SASKELGWTAQEAIGKKMFLGDDRPGIVAGVVKDFHFESLHAPIKPFILFPESWRRQL
                     LVKVSGAHLQQTISYLESRWKALVPQRPFEFHFLDDDYNKLYRSEITLGTIMDVFAGI
                     AIVLACLGLFGLSAYTVQQRFKEIGIRKVLGASVSNIALTLSRDFIVLTGIAIVIAIP
                     AAWWASAKWLQGFSYRTTVSWNVFALAAVATILLAVITVSVQAIKAAVANPVQSLRTE
                     "
     gene            6050..8422
                     /locus_tag="VEV83_04345"
     CDS             6050..8422
                     /locus_tag="VEV83_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44373.1"
                     /translation="MFHNYFKTAWRNIIRTFGYSLLNVLGLATGMAVALLIGLWVYDQ
                     YSYDKFLPGYQSLYRVQRNYDSNGDTLTFQTTSLRLADALRSQVPGIEYVAESDWMGQ
                     HGLMVGDKKLFINGAQAGTDFLKMFQYPLIYGNAGTVFKDAYSIVLTQSTAKALFGNE
                     DPIGKRVRFDNENDLKVTGILKDIPYNSTNKFNFVVPFTYIEQTNPNVKTRGHASFSN
                     NSRQIFVKLEPGISYAQIAPKIRTIEHIETDNTNAMNSYVTLQPMERWHLYSNYVNGQ
                     DTAGFLEYVRIFTIIGILVLLIACINFINLTTARSEKRAKEVGVRKAIGSQKKDLIIQ
                     FLSESFLLTLIAFIFSVLFVQLALPLFNTLTETQISIPSSTAGFWLLMAACVLTTSLI
                     AGSRPAFYLSSFNPVKVLKGRMQTGRSASLSRKILVVVQFSCSIALIISTVVIYQQIQ
                     YAKDRPTGYDINRVMKTYMNNDLTKNYTALKNELIQKGIAEDVTTATSPAIDVTWHTD
                     IDYWPGKHAGETVEMGNIYVSDDYFKTVGMKMKEGRDFLGGYDSTSVIFNQTAIERLR
                     LKNPIGQTITYGGQQLAIVGVVKDALMISPFTSAEPTMFHCVPDPQDVMLYKLSPHIK
                     TADAIKQLTVIFNKYDPSYPYDYSFEDENYASKFQLESLIGKLSGLFAALAIFISCLG
                     LFGLAAYIAEQRTREIGIRKVLGASVQQVWMLLSKDFILLVVISCLIASPISFYLLHN
                     WLMKYDYRINIHAGVFILSAGVALLVTIVTISFQAIKAAVANPVKSLRTE"
     gene            8518..>10792
                     /locus_tag="VEV83_04350"
     CDS             8518..>10792
                     /locus_tag="VEV83_04350"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44374.1"
                     /translation="MFRNYLKVVWRNLSKNKLYSFINIAGLSVGIACCVLIFLYVQYE
                     LSYDKYNVKAGQIYRLTEVLHLPDGNNERAVTSPPMAPKLQANFPEVLKSVRISYSGR
                     YLSYEKKKIPSSHIMYADSAFFDIFTFPMISGSPQKALVNPYSIVLTESMAKKYFGAV
                     SPLGKIMQLSDTIPLTITGVVKDVPINSHFSFDCILSRSTINALSQNQPETEWFNNNY
                     YTYLLLPANCDYHALENKFSSFVRKEMADEIKSSGLYYDLKLQPLLNIHLRSNLNSEI
                     NPNGDITYVYIFSAAAFLILLIACINFINLSTAKSVTRAKEIGLRKVIGANRFQLVVQ
                     FLGESLLFTVIATVISVVLIQIGLPYFNSFTGRSLTLFRGNAGIVFLFAAIIFLAGFL
                     AGIYPALLMSSFSPVQALKGPAKYEWRDIFLRKGLVVFQFTVAIILIAGAGLVYKQLQ
                     FIQNQKIGLNKDQVIEVPIPPSQSLQKDILLQQFQETPNVVNASLTSFSFKEPVSRIA
                     TLPEGFADNQVNSYNSIFVDQNFVPTFQIPLAAGRNFSTAFPTDSNEAFIINEAAVKA
                     FRWKNDQAAIGKNIDWGLGKKGKVIGVVKDFNYTSLHDNVKPLIIQILPEGYSFIALR
                     VNATGLPQTIAALSSKWKELIPDESFQYSFLDDDFAALYQSEQNLQRVLGLFTVLSVF
                     IACLGLFGLAAFTIRQRFKEIGIRKVIGASTFSIVSLISKDFLKLVVISFLIAAPVAW
                     FGVNKWLQNFAYQVSISW"
BASE COUNT         3078 a         2133 c         2467 g         3114 t
ORIGIN      
        1 aaggagaaat acgcttcaga aaaaattgat gttgaggtga aagctgctga taaaaattat
       61 ttgagcacct acgggttgca gttaacagcc ggaagatggt tcgacgacaa tgatgagcac
      121 agtgtaaatg atgccattcc cgattcttta aaacgatatg catttgtatt gaacgaaacg
      181 gcggtaaaag cgcttggttt tgcgtccgcg caggatgcgt taggtaagta tgtaacgttc
      241 ggtatgaatg atatttccgc gcccgtgatt ggcgtggtga aagattacaa cacaacttcg
      301 ctgcgcgatg ctgtaaagcc ggtattaatg gtggagtttc ccttcttcta ttacaacgca
      361 ggcatgaaat tgagcaacgg ttattctgcg caaacattgt ccgccattga aaaggcgtgg
      421 acatctgttt acccaaacca attattcgaa agtaatttcc ttgatgagca cattgcttct
      481 ttatataaga atgaaaaacg aactcaacaa ttattcaacg tcttcacttt tctatctatt
      541 gtgataaacg ttctcggtct tgtcggcttg ctttcattta tgatcgaaca aaaaacaaag
      601 gagatcggga taagaaaagt gttaggtgct tctgtgaaag atatttcatt tatactctca
      661 aaagactttt tgcggttgat agtaattgca tttttcattg ccgcgcctgc cggatggtta
      721 ctgatgaata agtggttgca ggactttgca tatcgcacca ctataagctg gtgggtattt
      781 gttgcggctg tcgtggctgc gttgcttgta accggcattg cggtaggatt tcaaacgata
      841 aaggcagcgg tggcgaaccc ggtgaagagt ttgaggacgg aatgataaga tgagtaatga
      901 gggatgagta atgagtttgt gaatggtgaa tggtgaattg tcaatggtga atctgtaaat
      961 ctgcaatctg caattgcaaa tcctaaatcc taaatcttaa atcgtatatc agtagcgtta
     1021 tgtataaaaa ctatttcaaa acagcctgga gaaatcttat caaaaacaag atctattcga
     1081 tcataaacat acttggtctt gctgctggca tggccgtggc catgttgatc gctttttgga
     1141 tctgggacga acttacctac gacacgtacc atactaatca tgcgcaactg gcgcaggtga
     1201 tgacgacttt catcgacaac gatggcaaac agtcaaccgg gcaggccgtt tgcctgccta
     1261 ttggtgatga gttgcgtacc aaatatggaa gtgatttcaa aaatatttcc atggcgtcgt
     1321 ggaatttcgg acacgtgttg gctgtgggcg agaagaagat cacctctagt ggtatgtggg
     1381 tagagtcaaa ttttccgtcc atgttttccg tgaaaatgct gcaaggaaat ataaacgctt
     1441 tgtctgatcc ttctgcgatt ttaataaatg cctcactcgc aaaaacattg ttcggcgacg
     1501 cgaaccctat caacaaaatg atcaggcttg ataataaaga caactacaaa gttgcaggcg
     1561 tattcgagga ttttccgcat aacacaacac tcaacgatac aaaattgctt ttgccatgga
     1621 aaaaatatat aaccacagaa gagtgggtaa aggaggctgt gacgcaatgg aacaatcatt
     1681 catggcaggc atacgtgcag gtggccgata acatagacat ggataaagag acggagaaga
     1741 taaaaaatgt ggtgatggtc cataaaaatg caaagacaga tggcctggaa caagctgttt
     1801 tgtttcccat ggataagtgg cggttataca gcgattttaa ggacggcaaa gcaaccggtg
     1861 gccgcatcca gttcgtatgg ctgttctcaa taataggcgt gtttgttttg ttgcttgcct
     1921 gtataaactt catgaatctc gcgacggcgc gaagtgaaaa acgcgcacgc gaagtcggta
     1981 ttcgcaagac ggtcggttca ttccgcggcc agttaataag acaattcctc accgaatcca
     2041 ttgttgttgc atttgtttcg tttgtattct caataatttt tgtgctgctg ttaatgccga
     2101 tgtttaacag gcttgcagac aaaaacatcc aggtgccatg gacgaatgcg ttgttttgga
     2161 tcatcgcatt gacatttacg ttgatcacag ggctaattgc cggaagttac ccggcgcttt
     2221 acctgtcccg ctttcagccg gtaaaagttt taaaaggaac ctttcgtgtt ggaagatttg
     2281 catccctacc acgtaaagtt ttggtcgtgg tccaatttac attttctatt gcattgatca
     2341 taggaacgat catcgtcttc aatcaaatcc aatacgcaaa gaaccggccc gtcaattacc
     2401 gcagcgaagg acttattact gtaatgatgt cgacgcctga tctgtatgga cattacgatg
     2461 cgataaggtc ggatctgctt gcaacgggtg tggtcgataa catggctgaa tcttcaagcc
     2521 ccacgacgaa cgtatggtca aaccagatcg gttttaactg gcagggaaaa gatccgaact
     2581 cgttgcccag tttcgggact atcgcagtga tggaagattt tggcaagacg atcggatggc
     2641 agatcaaaga aggcagagac ttttccaggg aatttgccac agacagcctg gcgatggtat
     2701 taaatgagtc tgctgtgaaa cttatcggaa tgaaacgtga tattgttggc caaaccattc
     2761 agttcaacga cagaaactat acagtgatcg gcgtgataaa ggacatgatc atggaatcac
     2821 cctacaggcc ggtaacacca acagtttttt tgtgtaatca taattgggcg aatgtgatca
     2881 caatcgccat aaaacagggc gcaccggtaa agactgcgtt gagtaagatc gaagctgtat
     2941 tcaaaaaata caatccaacc gcgccgtttg attatacatt caacgacgaa gattatgcaa
     3001 agaagtttgc agatgaagaa cgcgtcggaa atctttcgac cttcttcacc atactggcaa
     3061 tattcatttc atgtctcggt ttgtttgggc ttgcatcatt tgtagcagaa cagcgcaaaa
     3121 aagaaattgg agtccgaaag gtactcgggg cgtcggtgta caatttatgg cgtatgttat
     3181 cgaaagaatt tgcattgctg gtagcgatct cctgctttat tgcaattcca ttagcgtggt
     3241 attatttgaa cggctggctt aaacaatatg attacaggac acccatatcg ttgtggatct
     3301 ttattgtttc cggcgttggt gcgctggcga tcacattgat cacggtgagt ttccaggcag
     3361 tgagggcagc gatcgctaac ccggtgaaaa gcttaaggac ggagtgacga aatgagtgat
     3421 gagtgatgaa taatgagtga ggtaatgatt aattggcaaa tctaaaatct gaaatctgca
     3481 atctgaaata gtacttcatg ttcagaggtt gtgggaacaa tttcaaaatt tagaaatcag
     3541 aaatgtttaa aaattatttc aagaccgcat ggcgaaatct tgtcaagaat aagatttctt
     3601 cctctataaa tattgccggg ttaacgatcg gtttaacgtg ttgcctgctc attgccttat
     3661 acattcagca tgaattgagc tttgataaat tccaggcaaa tggagaccgc cttgcacgtg
     3721 tcatcatgcg atacagtttc gatggcagca gtgaatcaaa tgaaggaaac tttacaagcg
     3781 ttcgggtggc ggcaattttt cccaagactt ttccggaagt ggagtctgcg attaagatga
     3841 cacaatacag cagggtggtg agatatggag acaagatgtt tgatgagaaa aatttcatgt
     3901 acgcagacgc gaacttcttc gatattttct cattcaaatt gttgaacggt aatattcacg
     3961 atgcactgtc catgccgtac gacgttgtac ttacggaatc aactgcgaga aaatattttg
     4021 gcagtagcga tccggtcaat agaatgctgc gtgttggtaa cgatagcaac ttataccgcg
     4081 ttacggccgt tatgcaggat tgcccccgca attcgcaaat tcaatgcgat ttcgttgcat
     4141 cattttcatc attgggtatt acaaaagatg ccgaagacac ttattgggac gctaattata
     4201 ccacttactt attactgaaa aataaggata acattgcgtc gttggagaga aagtttcctg
     4261 cgttcatgaa aaaagaaatg gcaggagaag gcgcgactgt aaacttccat cttgagcgct
     4321 tcaataaaat acacctgtat tctccatacg acagtttcgt gccaaacaac agcatcactt
     4381 atatctatat tcttgctgcg gtagcgttgc tgattctcat tattgcctgc ttcacatacg
     4441 taaacctcag cacggcacgt tcgttggaaa gagctagaga agtaggtgtg cggaaagtga
     4501 taggcgcatt gaaaaatcaa ttgttctggc aatttatcaa cgaatcattt ctaatttctt
     4561 tgatcgctgt cctgttaagc ttgttgttgt cggctctctt gttaccattt ttcaatagcc
     4621 tgtcaaacga gcagctagaa gcaagatcac ttttttcttt gccttttgtt ttgttctcca
     4681 tatcggtcgc tgtgatgatt agtttacttg caggaatata cccggcgctc attctaacga
     4741 aatttcaacc ggtaaaagtt ttgaaaggag ctttcaagaa tacagcatcc ggccaggcac
     4801 tacgaaagtc cctgatcgtt ttccagtttg cgatctcggt gtttcttatt gtgtccactt
     4861 ttattgtgca gcaacaatta tatttcattc aacatataaa acttggttat gatcgcgatc
     4921 atgttgttgt attgcctctt gacaacaaga tgctggataa cctggcagta ataaagcaac
     4981 aattcaggca aaaccccggt gtgttaagcg tttcatcgtg ctcgaccacg cctgtgcagg
     5041 gcggtggtgg attcaatatg cgatctgata tcatgcctgc tgataagcaa atcgcagtca
     5101 ccgccgatcg cgtggatgaa gattttgtca gtacactcgg cctgcaaatt atagcgggaa
     5161 gagatcttac tgcgcaggat atgaaagatg tgtcgaatga tgattataaa aagaatattt
     5221 ttcacttcat cctcaacgaa tcggcttcaa aagaattggg atggaccgca caggaagcca
     5281 tcggtaaaaa aatgttcctg ggagacgatc gtcccggaat tgttgcaggt gtcgtaaagg
     5341 attttcattt tgagtctttg catgcaccaa taaaaccttt tatacttttt ccggaaagct
     5401 ggcgaaggca attgctcgtg aaagtttcgg gcgcgcattt gcagcagacg atctcgtatc
     5461 tcgaatcaag gtggaaagca ttggtgccac aacgtccatt tgaatttcac tttttagatg
     5521 acgattataa caaattgtat cgctccgaaa taacgctcgg aacgatcatg gatgtcttcg
     5581 caggaattgc aattgttctt gcatgtttgg gtttgtttgg attgtcggct tacactgtac
     5641 aacaacgctt caaagagatc ggcataagaa aagtgctggg tgcatcggtc agtaatattg
     5701 ctctcacgtt atcgcgcgat tttattgtac tcaccggtat tgcaattgtg atcgcgatcc
     5761 cggcagcctg gtgggcgtcg gcgaaatggt tgcaggggtt ttcatatcga actaccgtat
     5821 catggaatgt ttttgcactg gcagctgttg caacgatcct ccttgcggtt attacggtaa
     5881 gcgtgcaggc gataaaagcg gcggtggcaa acccggtgca gagtttgaga acggaatgat
     5941 tgaaatgagg atagagtgat gagtgagtgg tgaatttgtg aatggtgaat tagcctggga
     6001 tatgtaaatc gtaaatcgta aatcgtacat cgaaaaatca ggagtggtca tgtttcataa
     6061 ttatttcaaa actgcatggc gtaacataat aagaacgttt ggctatagcc tgctaaatgt
     6121 tttaggcctt gctaccggaa tggctgttgc attactgatt gggctgtggg tatatgacca
     6181 atactcctac gataaattcc tgccaggata tcaatcactt taccgggttc agcgcaatta
     6241 cgacagtaac ggagatacac tcacttttca aactacttct ttgagattgg cggatgcatt
     6301 acgcagccag gtccccggaa tcgaatacgt ggcagaaagc gactggatgg gccagcatgg
     6361 attaatggtt ggcgataaaa aattatttat caacggtgca caggcaggta cggatttcct
     6421 taagatgttc cagtatcctt tgatatacgg aaatgccggc actgttttca aggacgcgta
     6481 ttcgatcgtg ttaacgcaat caactgcaaa agcgcttttc ggcaatgaag atcctattgg
     6541 taaaagggtg cggtttgata atgaaaatga tctgaaagtc accggcattt tgaaagacat
     6601 tccttacaac tcaaccaaca aattcaactt cgttgttcca ttcacttaca tcgagcaaac
     6661 aaatccgaat gtaaaaacca ggggccatgc aagtttcagt aataacagcc ggcagatctt
     6721 tgtaaaactc gaaccaggca tttcttatgc gcaaatagct ccgaagatca ggaccattga
     6781 acacattgaa acggataata ctaatgcaat gaattcttac gttacacttc aaccaatgga
     6841 gcgctggcat ttatattcaa attatgtgaa cggccaggac acagcaggtt tcctggaata
     6901 tgtaagaata tttacgatta tcggcattct tgttttgctg atcgcctgta taaattttat
     6961 caatctcacg acagcacgtt ctgaaaaaag agcaaaagaa gttggtgtac gaaaagccat
     7021 tgggtcacaa aaaaaagatc tcattataca gttcctgtca gaatcatttt tgctcacttt
     7081 aattgcgttt attttttcag tgttgtttgt acaattagcg ttaccgttat tcaatacgct
     7141 tacagaaacc caaatttcca tcccatcttc gactgccggc ttttggttgt tgatggcagc
     7201 ttgtgttttg acgacttcgc ttatcgccgg aagcagaccc gcattctatt tgtcttcttt
     7261 caacccggta aaagttttga aaggaagaat gcaaacaggg agatccgctt cactttcaag
     7321 aaaaatttta gtggtcgttc aattcagttg ttcgattgca ttaattataa gtacggtcgt
     7381 catttaccaa caaatacaat atgcgaaaga caggccaacc gggtatgaca tcaacagggt
     7441 gatgaaaacc tacatgaata atgacctgac aaaaaattat acggctttaa aaaatgaatt
     7501 gattcaaaaa ggaattgccg aagatgttac aactgcgaca agccccgcga tagatgtaac
     7561 gtggcacaca gatatcgatt attggccggg caaacatgca ggcgagacgg tggagatggg
     7621 aaacatttac gtatctgatg attacttcaa aacggtcggg atgaagatga aagagggtag
     7681 ggattttttg ggcggatatg attcaacaag cgtgatattt aaccagacag caatcgaacg
     7741 ccttcgactc aaaaatccca tcggtcaaac tatcacttac ggagggcagc agttagctat
     7801 tgttggcgtc gtaaaggatg cattgatgat ctcgcctttt acgtctgccg agccaaccat
     7861 gttccattgt gtccccgatc cgcaggatgt gatgttgtat aaattgtctc cgcatataaa
     7921 aacagcagat gctataaaac aacttactgt tattttcaat aaatatgatc cttcttaccc
     7981 gtatgattat tcttttgagg atgagaatta tgcatcaaaa ttccaacttg aatcattgat
     8041 cggtaagctt tcaggtttgt ttgcagctct tgcgatcttt atttcctgcc tgggtctgtt
     8101 cggtttagct gcatacatcg cagaacaacg tacccgggaa ataggcatcc gcaaagtgct
     8161 gggtgcttcg gtgcaacagg tttggatgtt gctttcaaaa gattttatcc tgttggtagt
     8221 aataagttgc ctgatcgcat caccgatctc attttatctc ctgcataact ggttaatgaa
     8281 atatgattac cgcatcaaca ttcatgcagg agtatttatt ttaagtgcag gcgttgcatt
     8341 gctcgttacg atcgttacaa tcagtttcca ggcaataaaa gcggcggtgg cgaacccggt
     8401 gaaaagtttg agaacggagt aaaaaaatga gtaatgaata atgagtgatc actgtatttg
     8461 tgaattgtga atggtcaatc aatctgcaat ctgcaatcgg aaatcagaat aaggtctatg
     8521 ttcagaaatt atttaaaagt cgtgtggagg aatttgtcga agaacaaatt gtactcattt
     8581 ataaatattg ccggcctgtc agtaggcatc gcatgttgtg tgttgatctt tttgtacgtg
     8641 caatatgagt tgagttatga caagtacaac gtaaaggcag ggcagatcta tcgactgacg
     8701 gaagtgctgc acctgccaga cggaaataac gagcgggctg ttacctctcc tccgatggct
     8761 ccaaagctgc aggctaattt cccggaagtt ttaaagagcg tacgcatcag ttattcgggc
     8821 aggtatttgt cgtacgaaaa aaagaagatt ccaagctcgc atatcatgta tgctgactct
     8881 gccttttttg acattttcac tttccccatg atcagcggga gcccgcaaaa agcattggta
     8941 aatccgtact cgatcgttct tacagaaagc atggcgaaaa aatattttgg cgctgtgtct
     9001 ccgctgggaa aaataatgca gttgtcagac acgattccgt taacgataac aggagtagtg
     9061 aaagacgttc cgattaattc gcattttagt tttgactgta ttctttcgcg ttcaacgata
     9121 aatgcgctaa gccaaaatca accggagacc gaatggttca ataataatta ttatacatat
     9181 ctcttgttgc ctgcaaactg cgattatcac gcgttagaaa ataaattcag ctcttttgtt
     9241 cgcaaagaaa tggccgatga aataaagtcg tccggtttgt attacgacct gaaacttcag
     9301 ccgttactca acattcattt gagatcgaac ttaaattcgg agatcaatcc caatggcgat
     9361 attacttacg tgtatatttt ttctgcagct gcctttctca tacttcttat cgcttgcata
     9421 aattttatca acctgtcgac tgcaaaatcg gttacacgtg caaaagagat cgggttaaga
     9481 aaagtgatcg gcgcaaaccg gttccagttg gtcgtgcagt ttctcgggga gtctctttta
     9541 tttacggtga tcgcaacggt catttccgtt gttttgatcc aaattggttt gccgtacttt
     9601 aattcgttca cgggacggtc tctcacttta tttaggggta atgccggcat cgtatttctc
     9661 tttgcagcca taattttttt ggcgggattc ctggcaggaa tttatccggc cttgctgatg
     9721 tcatctttct cgccggtaca agcgttgaaa ggtcctgcga agtatgagtg gcgcgatatc
     9781 tttttgcgta aaggcctggt tgtttttcag ttcacagttg ccatcatttt gattgctggt
     9841 gcgggattgg tatacaaaca acttcagttc atacaaaatc aaaagatcgg tttgaacaag
     9901 gaccaggtca tagaggttcc aatccctcct tcacaatctc tgcaaaaaga tattttactg
     9961 cagcaattcc aagagacacc gaacgtagta aatgcgtccc taacgagctt ttcttttaag
    10021 gaacctgttt cgcgtatcgc aacgttacca gaaggatttg ctgacaacca ggtaaattct
    10081 tacaactcga tatttgtcga tcagaatttt gtcccgacat ttcaaattcc actggctgcg
    10141 gggcgcaatt tctcaacagc attcccaaca gattccaacg aagcctttat cattaacgaa
    10201 gctgccgtaa aagctttccg atggaaaaac gaccaggctg cgatcggcaa aaacatcgac
    10261 tggggattag ggaaaaaagg aaaggtgatc ggcgttgtaa aagacttcaa ttacacttcg
    10321 ttgcatgata acgtaaaacc gctgatcata cagatcttgc ccgaaggcta cagctttatt
    10381 gctttgcggg tgaatgcaac cgggttgcca caaacaatag ctgctttgtc ctccaaatgg
    10441 aaggaactta ttcctgacga gtcgtttcaa tattcatttc ttgacgatga ttttgctgcg
    10501 ctttatcagt ccgaacaaaa tctccagcgc gttttgggct tgttcaccgt gctttccgtt
    10561 ttcatcgcat gtctcggcct ttttggtttg gccgcattta cgatcaggca gcgatttaaa
    10621 gaaataggaa taagaaaagt tatcggggca agcacgttca gcattgtgtc attgatttcc
    10681 aaagattttc taaagctggt ggtcatatcg tttttgatcg ctgctccggt agcctggttt
    10741 ggggtgaata aatggctgca aaattttgca taccaggtga gcataagctg gt
//
LOCUS       DASQJI010000146         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2316903,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000146 DASQJI010000000
VERSION     DASQJI010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2316903"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..466)
                     /locus_tag="VEV83_04355"
     CDS             complement(44..466)
                     /locus_tag="VEV83_04355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYK44375.1"
                     /translation="MLEQTKINEESYKLLIESVKDYAIVMTDPEGYIISWNKGAEKIK
                     GYTADEIIGQHISLFYTADEIESGEPEKNLQRAKESGRFEDEGWRVRKNGSRFWANVG
                     KDHRIVRVLRHALQCGARRTLMSAHREVVILRCKNYGP"
     gene            689..1810
                     /locus_tag="VEV83_04360"
     CDS             689..1810
                     /locus_tag="VEV83_04360"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK44376.1"
                     /translation="MKNMFLILSVTFATLVLPEHGIAQNAGSQLSYTSKYDFVQGDKI
                     IAYEDFSSANLGDFPVRWNTDGSAEVVTVDKMEGKWLKIAEKGIFYPEFIKDLPDNFT
                     FEFDLAVNNANYLSPLCLNIANLKKPEDFVDYAYLVSLRPEHAVHLEFAAANSIYDGS
                     SKLITGKSGSATINNAVNFKVWDVSKNNLAHISLWRQAQRLRVYLNGEKIWDSPRAFE
                     APGTYNAITFAFYGPYGKEDYYLLSNLRLAIGAPDARNKLMTEGKFVTSGIHFDVNSD
                     KIKPDSYGILKEVANVLKENEAIKLKIVGHTDSDGDDSKNMDLSKRRAESVKNTLMNE
                     FQISGSRMETDGKGESMPVTKNDSPEGKAQNRRVEFLKM"
     gene            2078..2164
                     /locus_tag="VEV83_04365"
     tRNA            2078..2164
                     /locus_tag="VEV83_04365"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2112..2114,aa:Ser,seq:cga)
BASE COUNT          862 a          583 c          600 g          861 t
ORIGIN      
        1 taaggcagga aacgaactac cagtatattg ttttataaaa gttttaagga ccatagtttt
       61 tgcacctaag gatcacgact tcgcgatgtg ctgacattag agttctccgc gccccacact
      121 gtaaggcatg ccgcagcact ctaacgatgc gatgatcctt gcctacgttg gcccaaaacc
      181 tgcttccgtt ttttctgaca cgccatcctt catcctcgaa cctgcccgat tcttttgccc
      241 tttgcaagtt tttttcgggt tctccgcttt caatttcatc agcagtataa aataaagaga
      301 tgtgctggcc gataatttca tctgcagtgt aacctttaat tttttctgcg cctttattcc
      361 agctaataat ataaccttcg ggatctgtca taacaattgc atagtcttta acgctttcaa
      421 tcaaaagctt ataactttcc tcgtttattt tagtttgctc taacataacg aaaagtaaac
      481 cgtttcaatt tcgaccgaga ttttcgacgc tcaacttgtt aaatgcgtag ttattttcgg
      541 gcaatagatt tgcaatgcga atttattaca ataaaaatct tacagttatg attctgatgt
      601 cctcctctcc tttccgcatg agaaagaata aaaaatgcaa cctgtttatt ttcgaactgt
      661 ttttcttaga ttagccaaaa cttgcaatat gaaaaacatg tttctgatcc tatcagtcac
      721 tttcgccact ttggtactgc ccgagcacgg catcgcgcaa aatgcgggat ctcaattatc
      781 gtatacatca aaatacgatt tcgtgcaggg agataaaata atagcttatg aagatttcag
      841 ttcagccaat ctcggagact tcccggtcag atggaataca gatggaagcg cagaagttgt
      901 cacggtcgat aagatggaag gcaaatggct gaagatcgcg gaaaaaggta ttttctatcc
      961 ggagtttata aaggatcttc ccgacaattt tacatttgaa tttgatctcg cggttaataa
     1021 tgcaaattat ttaagcccgt tatgtttgaa tattgcaaac ctcaaaaaac ctgaggattt
     1081 tgtcgactat gcatacctcg tgtctctgcg tccggagcat gctgttcacc ttgaatttgc
     1141 tgcagcaaat tcgatttatg acggatcatc caaattgatc accggtaaat cgggtagtgc
     1201 gacaatcaat aatgcggtca attttaaagt atgggatgtt agtaaaaaca acctcgctca
     1261 catttcttta tggcgccagg cgcagcgcct tcgtgtttat ttaaatggag aaaaaatatg
     1321 ggatagccct cgtgcatttg aagcacccgg tacgtacaac gctataacat ttgcttttta
     1381 cgggccatac ggcaaagaag attattattt gttgagcaat ttacgccttg cgatcggagc
     1441 gcccgacgca agaaataaac tgatgacgga aggaaaattc gtaaccagcg gaattcattt
     1501 tgacgttaat tcagataaaa taaaaccaga ttcgtatggc attttaaaag aagttgcgaa
     1561 tgtgcttaag gaaaatgaag caattaaatt aaagatcgtt ggacataccg acagcgacgg
     1621 cgatgactca aaaaacatgg atctttctaa aagaagagcg gaatcagtta agaatacttt
     1681 gatgaatgag tttcaaatca gtggttcaag aatggaaact gatggtaaag gagaatcaat
     1741 gccggttact aaaaatgatt cccctgaggg caaggctcaa aacaggcgag tcgagttctt
     1801 gaaaatgtaa cttgtcaacg ttcggtgagc aggtacaact ccacctttaa gaatctaaga
     1861 atgcacgcgc cgaaaccgat tttcgcaagg gcttcgttac gttgatggct gcacacgggt
     1921 tttaaaaatc agctttttgc aagtaatcgt ctgctaaaac aataagcgac cggaaaagat
     1981 tttttgctga cattgttttt cacgactcgt tattgtcggg atctatcgat tttattccca
     2041 cgaaaaaata taaatttgaa agttgattat cgagcatgga gagatgccag agcggtcgaa
     2101 tgggacggtc tcgaaaaccg ttgtatgggc aactgtaccg agggttcgaa tccctctctc
     2161 tccgctgtca ggcttcgtag ctttagcgaa ggaggctttt tcaccctaaa ccggaatttg
     2221 tgttttacgt ttatatcctc agatgccgcg atggtttgta ctataccggc tgcacaaaaa
     2281 atttagacaa tcggcttgaa aggcaccaaa aagggtatgt ccctgcaact tgcaaaacac
     2341 tccggtgatg gtaatttttt actgtgcctt tgaaaacaag aataaggctt ttgaatttga
     2401 gcggtatttg aaatcgggat ctgggatcgc gtttagaaat aagcattttg tttaaagaag
     2461 ttcctcctac gtcaagactt cggaggacac gtcgaatccc tctctctccg caaaacaagt
     2521 aatgtccccg caacaagcag gggcattttt attttcggag tgttgcgagt cagcttgcat
     2581 aaacgcagaa aacaaaaaat gcaagtgagc gaagaaacgg acattacttc tctgctattc
     2641 cttttgccgg cggcatccca ggtgatcgcg ctgctgaacc atcacagtag ctgtgatttt
     2701 tgtacattag cgaatcataa ggttgacagt aaacaaagaa actcagcctt acataaaagt
     2761 atttccacat taagggtttt aaaggattaa gatcatcaga cttaaattgt gattgtgaaa
     2821 aaggtgcttg ccattttatc gctgtttctt gtaactatta tttgcctttg tttttcttct
     2881 tgttttcata ataaaaagga cgacgt
//
LOCUS       DASQJI010000147         2716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1088028,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000147 DASQJI010000000
VERSION     DASQJI010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088028"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VEV83_04370"
     CDS             complement(<1..687)
                     /locus_tag="VEV83_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK44377.1"
                     /translation="MQNLFIEYIFLIMIILILVMIANRLRVAYPIVLVLGGLLLSFTV
                     RFTNATINPEMVFFIFLPPLLYEAAWQVSWKEFWKWRRIIASFAFLIVIITSCVVAFA
                     SYWIIPGFTLALGFLLGGIISPPDAVSASTIMRQVKVPRVLRSIIEGESLLNDASSLI
                     VYRFALAAVVTGEFHFQQAAINFFLVIIAGTLIGLAIGFIFYAIHRWFPTTSSIEIIL
                     TLIAPYCMYYA"
     gene            complement(899..1162)
                     /locus_tag="VEV83_04375"
     CDS             complement(899..1162)
                     /locus_tag="VEV83_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44378.1"
                     /translation="MFAPGSKLSWHIHPAGQYLLLTEAGYYQEKGQPGRIVHKGDIIT
                     CLPGVAHWHGAAQISSFAYISVTPVTKGKTIWLQPVTDEEYIV"
     gene            complement(1386..2369)
                     /locus_tag="VEV83_04380"
     CDS             complement(1386..2369)
                     /locus_tag="VEV83_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK44379.1"
                     /translation="MKKRMLGKSGLEVSALGLGCMGLSFGLGPATEKQNAIQLIRKAF
                     ELGVTFFDTAEAYGPFENEELLGEALAPFRNDVVIATKFGFKEGKTSLGTDSRPENIK
                     AMTEAALKRLRTDVIDLLYQHRVDPNVPIEDVAGTVKDLIKEGKVKHFGLSEAGVQTI
                     RRAHAVQPVTALQSEYSLWWREPEQEILPVLEELGIGFVPFSPLGKGFLTGKIDENTT
                     FDKSDFRNTVPRFSEENRKANQALVDLLAKIAKEKRATNAQVALAWLLAQKPWIVPIP
                     GTTKLHRLQENIGAAEIILDAEDLKEINEAVSKIEVQGARYSAQAQKMIDR"
     gene            complement(2483..>2716)
                     /locus_tag="VEV83_04385"
     CDS             complement(2483..>2716)
                     /locus_tag="VEV83_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK44380.1"
                     /translation="PGIIITPLANDELKGPRGEGYRKMIEASTAKRAGTPDEVGTVGA
                     LLMGNDGAFITGSDFLMDGGVTAAYWYGELAPK"
BASE COUNT          750 a          627 c          547 g          792 t
ORIGIN      
        1 ggcataatac atacagtatg gagcaatcag cgttaaaata atttctatgc tgcttgtcgt
       61 gggaaaccac cggtgtatag cgtaaaagat aaaaccgata gccaaaccta tcaaagttcc
      121 tgctatgata acgagaaaga aatttattgc tgcctgttga aaatggaact cgccggtaac
      181 tactgccgct aaagcaaaac ggtatacgat caaagacgaa gcatcattga gtagactttc
      241 accttcgatg atacttcgca gtactcttgg tactttcacc tgtcgcatta ttgtggatgc
      301 cgacactgca tcgggcggag aaataatgcc gcccagcaga aagcctaatg cgagtgtgaa
      361 acccggaatt atccaatagg aagcgaaggc aacaacgcat gatgtaatga tcacaatgag
      421 aaacgcaaaa cttgcaatga tccgccgcca tttccaaaac tctttccatg acacttgcca
      481 ggctgcttca tagagtaatg gtggaagaaa aataaaaaag accatctcgg ggtttatagt
      541 cgcattcgta aaccggacag taaagctgag tagcagcccg ccgagtacga gcacgatcgg
      601 gtaagcgacg cgcagccggt tcgcgatcat gactagtatg agaatgatca tgatcaggaa
      661 tatgtactca atgaataagt tctgcatggt agaagatcag gtttgaaaat agcaaaaaag
      721 catgaaagca aaattgcatg aataacgcta tgaggtaaca ccctgatggg tgcagaatac
      781 cacgatcaaa cattgcgctg aagaatttcc gcttgctatt aaaatctcta cagtgtgact
      841 ctaacggtat ccttggctcg tcatgtcgag ataacgagac atctcaacgt tttttatttt
      901 acactatata ttcttcatct gttacaggtt gcagccatat tgtttttcct tttgtaacgg
      961 gagtaacaga aatgtaagcg aagctgctaa tttgcgctgc gccatgccag tgtgctactc
     1021 cgggaagaca tgtaattata tctcctttat gtactattcg ccccggctgt cctttttcct
     1081 ggtaataacc agcctccgta agtagcaggt attgccctgc cggatgaatg tgccagctta
     1141 atttcgagcc gggtgcaaac actgcttgtg ccaggctaaa cgtgaagttg ctgtcaggat
     1201 gatttaattc attcagccaa ctagtgcccg tacaatcatc tttgtttacg ccaatttctc
     1261 ctttcgaaat aacgtggcgt cctgcgcctt tgccgtattg tctaaacttg cggcaatcaa
     1321 tagcactata aaaatttctt ttttcattta attaattatt gtgtttcatt aagatgatgc
     1381 aattgttatc tgtcgatcat tttttgtgct tgtgcactat aacgggcacc ttgcacttca
     1441 atctttgaaa cagcttcgtt aatttcttta agatcttcgg catccagtat tatttccgct
     1501 gcgccgatgt tttcttgaag acgatgcaat tttgttgtac caggaatagg aacaatccag
     1561 ggcttttgtg caagcagcca cgctaatgct acctgcgcat tggtggccct tttttcttta
     1621 gcaatcttgg ccagcagatc aaccagggcc tggttggctt tccggttctc ttcagaaaaa
     1681 cgtggcactg tgtttcgaaa atcagattta tcgaatgtgg tattctcatc aatcttgccg
     1741 gttaaaaaac ctttgcctaa agggctgaaa ggcacaaagc caattcctaa ttcttccagt
     1801 accggcaaaa tttcctgttc aggctcgcgc caccacaatg agtattcact ttgcaatgca
     1861 gtaaccggtt gaacggcatg tgccctgcga attgtttgaa ctccggcttc cgataatcca
     1921 aagtgcttta cttttccttc tttgatcaga tccttcactg ttcctgcaac atcttcaatt
     1981 ggaacattcg gatcaacacg atgctgataa agcaagtcaa ttacatcggt tcttaaacgt
     2041 ttcaacgcag cttcagtcat tgctttaata ttttcgggac gactatcggt tcctaatgat
     2101 gttttacctt ctttgaaacc aaattttgtt gcaatcacaa cgtcatttcg aaacggcgct
     2161 aatgcttcac caagcagttc ttcgttttca aatggaccgt aagcctcggc agtgtcaaag
     2221 aaagtaacgc caagttcaaa tgcctttctg attaattgaa tagcattctg cttttctgta
     2281 gcgggaccta aaccgaaact caatcccatg caacccaggc caagcgccga tacttccagc
     2341 ccgcttttac ctaacattct ttttttcata attgattttt taaaaaataa tcattcaatc
     2401 ttatgttacc caaccatttt acattgcagg acgcggtgat cgaaggaaag tttgatcatc
     2461 agcgttgatg ccgcatcagt cgttatttcg gagccagttc tccataccaa taggccgctg
     2521 ttacacctcc gtccattaag aagtcgctgc ctgtgataaa tgcaccatca ttacccatca
     2581 gcaaagcacc aacagttccc acttcgtcag gggttcccgc acgttttgcc gtcgatgctt
     2641 caatcatttt gcgatacccc tcacctctgg ggccttttaa ttcatcattt gcaagtggag
     2701 tgataataat tccggg
//
LOCUS       DASQJI010000148         8684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2163347,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000148 DASQJI010000000
VERSION     DASQJI010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8684
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163347"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VEV83_04390"
     CDS             complement(<1..206)
                     /locus_tag="VEV83_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44381.1"
                     /translation="MKRFIAILSLTFLVACAATSRFAPTAEEMPALQSKVPGLTYEEA
                     NQGYKLYISHCSNCHRLHNPNEYTA"
     gene            complement(213..1022)
                     /locus_tag="VEV83_04395"
     CDS             complement(213..1022)
                     /locus_tag="VEV83_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44382.1"
                     /translation="MQRIFIATALLLFTSLITRAQDRFFARTYTTNVLPKGNVDFELW
                     HTSRFGHENQYYHAQDQRMELEFGLGHNWQTAFYFNRYQERYSDSSDGTLTSNEIGFS
                     NEWKWKLSDPTLNRLGAALYGEWGVKGGDELEFEGKLILDKYVGKNLFAFNGVFEYEK
                     EFEWEDGKIKSGESETPVEFDLAYMYNFNSSFGLGFEMRNLNQIETGEGWKNSVLYGG
                     PTINYRTGKWFVIANYLPQWVNLHKTDESPGSKVLDEQERTEARILVGISF"
     gene            complement(1121..1891)
                     /gene="pgl"
                     /locus_tag="VEV83_04400"
     CDS             complement(1121..1891)
                     /gene="pgl"
                     /locus_tag="VEV83_04400"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HYK44383.1"
                     /translation="MELHVCKNYEELSDHVADWMVGYICKTLATKDRFSIVLTGGSTP
                     KRLYELLASDEYNHKIDWSRANVFIGDERFVPFDDERNNSAMIQKTLLDHVSVRQEHV
                     HFMQTENMSPETSANAYEEVLHYYFYHQPSNAGGSDRQTSNLKSTFDLVFLGMGDDAH
                     TLSLFPGQTNAIDEQNRWCTYLWLEQQNMHRITLTAPVVNAAKCVVFLVSGAGKKEAL
                     HNVFNENYNPAKYPSQIIKPASGQLHWFVDEDAMGNHL"
     gene            complement(1918..3432)
                     /gene="zwf"
                     /locus_tag="VEV83_04405"
     CDS             complement(1918..3432)
                     /gene="zwf"
                     /locus_tag="VEV83_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HYK44384.1"
                     /translation="MNNRRPPASIIFIFGGSGDLNQRKLTPALYNLFIDGWMPEQFSI
                     VGIGRTPFSDDDFRKHLLEGIREFSRRKDGDDGSWEKFSACISYLQMDAEDEAAYKNI
                     SDRVQKFQQEIGKQPNALFYLAVAPQLVPDIAKKLSTVKVCSDEKATRIVIEKPFGHD
                     LKSAHDLNVLLTQMFAEDQIYRIDHYLGKETVQNILALRFANALFEPIWNRNYIDHVQ
                     ITVAETVGVEGRGGYYEQSGALRDMVQNHILQLLCMVAMEAPVNFEANEIRNKKVDVL
                     NALRKITKEEVRDFAVRGQYGDGWIKGEKVNGYRQEEKVNKNSNVETFAAVKFYIDNW
                     RWQSVPFYVRTGKYMHQKTSVITIQFKPAPHYAFPAEAAETWRPNRLTISIQPEMDIR
                     LRFQAKRPGQSMTLNPVDMIFSYQDWYKDDHEPEAYETLLLDVMEGNPAQFMRADQVE
                     AAWNVVMPVIEAWEQRPPIDFPNYAPDSWGPEDAEALIARDGHNWITLPPREKR"
     gene            complement(3522..5039)
                     /gene="gndA"
                     /locus_tag="VEV83_04410"
     CDS             complement(3522..5039)
                     /gene="gndA"
                     /locus_tag="VEV83_04410"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HYK44385.1"
                     /translation="MENGLYDFGMVGLGVMGSNFLLNMADHGYKVIGFDLDAAKAKKL
                     EDEATSGTTVKGVITLQDMVQQLDKPRRIMMLVPAGKPVDEVISNLIPLLEANDVLID
                     GGNSHYTDTLRRVRTLEEKGIHFMGMGVSGGEEGARKGPSIMPGGDLSAWQRVKPILE
                     AVSAKVDGEPCVAYMGKDAAGHYVKMVHNGIEYAIMQLISEVYDLLKRGLGLSNNKLA
                     NVFKKWNEEELQSFLVEITSEIFLKNDEDAKERLVDVISDKAGSKGTGKWTSQDAMEL
                     PVSIPTIDVAVAMRTLSGYKEERIVASQLYRHEVKELKGKKDDDLKQIRDALYFATII
                     CYAQGLAMLYKASSELSMDIPLHDVVKIWRGGCIIRSSLLEDFYKAFTKDQVLSNILL
                     DKSVAKLLKKREKNIRAVIRLAVQSKIPVMGFMSALGYFDAYCTERMPTNLIQAQRDY
                     FGAHTYERIDKEGKFHTEWVHEVVKGEKHGAETENPTAPAHKRRGKPTVNDLKTN"
     gene            5300..6334
                     /locus_tag="VEV83_04415"
     CDS             5300..6334
                     /locus_tag="VEV83_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HYK44386.1"
                     /translation="MNSVANGAPTLTAKDFVTDQEVRWCPGCGDYSILAQVQKVMPTI
                     GVPRENIVIISGIGCSSRFPYYMNTYGMHSIHGRATAIASGLKAARPDLSVWIVTGDG
                     DGLSIGGNHTIHLLRRNFDVNILLFNNQIYGLTKGQYSPTSERNKVTKSTPLGSIDQP
                     FNPLALAMGADATFIARSMDRDPKHLQEMLVRANKHKGSSFLEIYQNCNIFNDGAFEA
                     FTEKATKPEETLFLEPGKPLLFGAAKNKGVKLDGFKPVVVELGVNASVDDVWVHDEFD
                     FYKAQILVRMFDDPKRDGHLPRPFGVFYETERGCYEDILQQQIDTTIAAKGHGNLERL
                     LRGSEVWEII"
     gene            6483..7028
                     /locus_tag="VEV83_04420"
     CDS             6483..7028
                     /locus_tag="VEV83_04420"
                     /inference="COORDINATES: protein motif:HMM:NF016144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HYK44387.1"
                     /translation="MTVTIADYNPEWPKMYEHEVALVMQAFPINNCLVEHVGSTSVKD
                     LKSKPVIDIMVGVEVLPDDITPIEEYLKPFGYEYMERYNQLIPERRFFQKEQNGVRTH
                     QIHLTSFHSDFWQKLLFFRDQLRENPSLRKGYEKLKLELAKRSWDSVNDYASAKDEFV
                     ESVDKKRKALKLKMQSTSAER"
     gene            complement(6997..8106)
                     /gene="nagA"
                     /locus_tag="VEV83_04425"
     CDS             complement(6997..8106)
                     /gene="nagA"
                     /locus_tag="VEV83_04425"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008448 - N-acetylglucosamine-6-phosphate
                     deacetylase activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HYK44388.1"
                     /translation="MSNRKAYIASTIFTGYNALPLHAVIVDDAKIEDVIPFQNVDRRC
                     EIIDFKDSVIAPAFIDLQLYGAYKRLLATYPDAETVKAIYEYSKSGGASHCMPTVATN
                     TYATIFKCIDAIKSYWHAGGAGVLGLHVEGPWISKEKRGAHNEEWIFIPMVEKVKELL
                     DYGKDVIKIITLAPEVCSDEIIGLIHSYDVLVSAGHTNASYERATEAFNNGIKTATHL
                     YNAMSALQHRDPGMVGAILDHPSVFSSIVPDGYHVSFPAIRIAKKIMGNRLFAITDAV
                     TETTEGFYKHTLEGDKYTANGILSGSALTMNKCAKNFVDQCGIDVDEALRMCSLYPAR
                     VIRKEMELGLIEAGRNANMVILDKQFNVLQTLTAS"
     gene            complement(8099..>8684)
                     /locus_tag="VEV83_04430"
     CDS             complement(8099..>8684)
                     /locus_tag="VEV83_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HYK44389.1"
                     /translation="ATDLYFNRLIWMLPTGEYGVYDKRHLFAYGDEHNHYSSGSKRLI
                     ASVNGWKINLQVCYDLRFPVWARQSPPFLSDTDGGSSSLLQKAETSLEYDVLIYVANW
                     PERRSLAWKTLLQARAIENQCYVIGVNRVGEDGTGVYYAGDSMVVNAMGEILYHKQHE
                     EDVFTTQLNKEHLEETRKRFPFWKDADRFIITNE"
BASE COUNT         2203 a         2080 c         1887 g         2514 t
ORIGIN      
        1 gccgtgtatt cgtttggatt atgcaggcgg tgacaattac tgcagtgaga tatataaagt
       61 ttgtacccct ggttggcctc ttcataggtg aggcccggca ctttagactg caacgcaggc
      121 atttcttctg ccgttggcgc aaacctggat gttgctgcac atgccaccag gaaagtcaag
      181 gataatattg caataaatct cttcattggt tatcaaaacg aaatacctac caaaattctt
      241 gcttcggttc gttcctgctc gtcaagtact ttagacccgg gcgattcatc ggtcttgtgc
      301 aagttcaccc attgcggaag atagtttgcg ataacaaacc atttccctgt gcggtaattg
      361 atagtgggtc cgccgtataa caccgagttt ttccatccct cgcctgtttc aatttggtta
      421 aggttgcgca tttcaaaacc aaggccaaaa ctgctattga aattgtacat gtaggcgaga
      481 tcaaactcta ccggggtttc ggattcaccg gatttaattt tgccgtcttc ccactcaaat
      541 tctttttcgt attcaaacac gccattaaaa gcaaaaagat tttttccgac atatttatcg
      601 aggatcagct tgccttcaaa ctcaagctca tcaccgcctt taacacccca ttctccatat
      661 aaagctgccc ccagcctgtt caatgtcggg tcgctaagtt tccacttcca ctcattgctg
      721 aagccgatct catttgatgt gagcgtgcca tcactgctgt cactgtaccg ttcctggtag
      781 cggttgaaat aaaacgcggt ttgccagtta tgccctaacc caaactccaa ttccatgcgt
      841 tgatcctgcg catggtaata ttgattttca tgcccgaatc ttgatgtatg ccataattcg
      901 aaatcaacgt ttccctttgg taaaacgttt gtcgtatatg tcctggcgaa aaaacgatct
      961 tgcgcccgtg ttattaatga agtgaacaga agtagtgccg ttgctataaa tattctctgc
     1021 atggttttta cttgtggcgc aaagaaagat gtttgtcgtt tctgtgagct tacgtgatgc
     1081 ggaaaccggt ttacggaaac aggaaacatg tgtgagcggt tcatagatga ttgcccattg
     1141 catcttcgtc tacgaaccag tgaagctggc cacttgccgg tttgatgatc tgcgagggat
     1201 attttgccgg gttgtagttt tcattgaaca cattatgcaa cgcttctttt ttgccagctc
     1261 cgctaacgag gaagacgacg cacttcgccg cgttaacaac aggggcagtt agcgtgatgc
     1321 gatgcatgtt ttgttgttcg agccacaggt aagtgcacca cctgttttgt tcatctatag
     1381 cattcgtttg gcccggaaag agcgaaagcg tgtgggcatc atcgcccatg ccgagaaaga
     1441 caaggtcaaa tgttgatttg agatttgaag tttgacgatc cgacccgcct gcattcgacg
     1501 gttgatgata gaaatagtaa tgtaacactt cttcgtatgc gtttgccgaa gtttcagggc
     1561 tcatgttttc ggtttgcatg aagtgcacgt gttcctgccg cacagacaca tgatccagta
     1621 aagttttttg gatcatcgcc gaattgtttc gctcgtcatc aaacggaaca aaacgctcat
     1681 cacctataaa aacatttgcg cggctccagt ctattttatg attgtattcg tcgctggcta
     1741 gcagctcata caatcttttt ggtgtactgc ctcccgtaag aacgatagaa aagcggtctt
     1801 ttgtagccaa cgttttacag atgtagccca ccatccagtc ggcgacgtgg tcgctgagtt
     1861 cttcataatt tttacaaacg tgcagttcca ttgttgatgt ttcagtgttt caaagtttca
     1921 gcgtttctct cgcggtggca gcgttatcca attgtggcca tcacgggcta tcagcgcttc
     1981 ggcgtcttcg ggtccccagc tatccggcgc ataatttgga aaatcgatcg gcggcctttg
     2041 ttcccacgct tcgatcacag gcatcactac attccacgcg gcttcaacct ggtcagcgcg
     2101 catgaactga gctggatttc cctccatcac gtcgagtagc aaagtttcat aagcctcggg
     2161 ttcatgatcg tctttatacc aatcctggta actgaagatc atgtcaaccg gatttagcgt
     2221 catgctctgt ccagggcgct ttgcctggaa ccgtaaacga atgtccatct ccggctgaat
     2281 actgatcgtt aaccggttcg gcctccacgt ttcagcggcc tcggcaggaa aagcataatg
     2341 tggcgctggt ttaaattgaa tggtaatgac ggacgttttc tgatgcatgt actttcctgt
     2401 gcgaacatag aacggaacac tttgccagcg ccagttgtcg atataaaatt ttacggcagc
     2461 aaacgtttca acatttgaat ttttgttcac cttttcttcc tgccggtaac cgttcacttt
     2521 ttcacccttg atccagccgt cgccatactg accgcgcact gcgaaatcac gcacttcttc
     2581 cttcgttatt tttcgaagtg catttaaaac gtcaaccttt ttatttcgga tctcgttcgc
     2641 ttcaaaattc accggcgctt ccatcgccac catacacaac aactgcagaa tatggttttg
     2701 caccatgtct cttaacgcgc cgctttgctc ataataaccg ccgcgacctt caacgcctac
     2761 cgtttccgcg acggtgatct gtacatgatc gatgtaattg cggttccata ttggttcaaa
     2821 taatgcattc gcaaaacgta acgccaggat gttttgaaca gtctctttgc cgagataatg
     2881 atcaatgcga tagatctggt cttcagcaaa catttgggta agcaagacat tcaggtcatg
     2941 ggcacttttg agatcatggc caaaaggctt ttcgatcacg atccgcgtag ctttttcatc
     3001 gctgcacact tttaccgtcg ataatttctt tgcaatgtca ggcaccagtt gaggcgcaac
     3061 ggccaggtag aacagtgcgt ttggttgttt gccgatctct tgctgaaact tttgaacacg
     3121 atctgagatg tttttgtaag cggcctcgtc ttcggcatcc atttgcaaat aagaaatgca
     3181 ggcagagaat ttctcccatg atccatcgtc gccgtctttt ctccggctga attcccttat
     3241 cccttccagc aagtgttttc tgaagtcgtc gtccgaaaaa ggcgtccgcc cgatcccgac
     3301 aatcgagaat tgttcgggca tccaaccgtc gatgaataaa ttgtataaag cgggagttag
     3361 cttacgctgg ttaagatctc cgcttccacc gaaaataaaa ataatagaag caggtggtcg
     3421 tctgttgttc ataagccctg gcccctacag gggaatttaa ttaaatccct ttgacgagat
     3481 ttaagcaagt gataaagatt ctaagttatt ttaaataatt ttcaatttgt ttttaaatcg
     3541 tttacggttg gtttgccgcg ccgcttatgg gccggcgcgg tggggttctc tgtttctgcg
     3601 ccatgctttt ctccttttac aacttcatgc acccattctg tatgaaattt tccttccttg
     3661 tctattcgct cataggtgtg ggcgccaaaa tagtcgcgtt gcgcctggat caggttggtt
     3721 ggcatccgtt cagtacagta tgcatcaaaa taacccagtg cgctcataaa acccatgacc
     3781 ggtatcttgc tttgcacggc gagtcggatc accgcgcgta tgttcttttc ccttttcttt
     3841 aaaagcttag ctacactttt atccaataag atatttgaca gcacctggtc ttttgtgaaa
     3901 gccttgtaga agtcttcgag cagcgaggaa cgaataatgc aacctccgcg ccatatctta
     3961 actacatcgt gcaacggaat atccatgctt aattcagagg atgccttata caacattgcc
     4021 agtccttgcg cgtaacaaat gatggtcgca aaatataaag cgtccctgat ctgcttcaaa
     4081 tcatcgtctt tctttccttt taattctttt acttcatgac ggtataactg tgaagcaacg
     4141 atcctttctt ctttataacc cgacaaagtg cgcattgcga cagccacatc gatcgtggga
     4201 attgaaacag gcagttccat cgcatcctgt gatgtccatt tgccggttcc ctttgagcct
     4261 gctttatcag agatcacgtc aaccaatctt tcttttgcat cctcatcatt tttcaaaaat
     4321 atttcggatg ttatttcaac caggaaagac tgcagttcct cctcattcca ttttttaaac
     4381 acattcgcca gcttgttatt gctcaagcca agtcctcttt tcaacaagtc atacacttca
     4441 cttatcaact gcataatggc gtattcaatg ccgttgtgca ccattttcac ataatgacct
     4501 gctgcatctt tacccatgta agcgacgcag ggctcgccat caacttttgc ggaaacggct
     4561 tcgagtatag gctttacacg ttgccacgct gacaagtcgc cacccggcat tatactcggc
     4621 cctttgcgtg ctccttcttc gccgccgctt acgcccatgc ccataaagtg aatgcctttt
     4681 tcttccagcg tgcgcacgcg gcgcaacgtg tcagtgtaat gcgagttgcc accatcgatc
     4741 aatacgtcgt tggcttcaag cagtggaatt aagttgctga tcacctcatc aaccggttta
     4801 cccgcgggga cgagcatcat gatgcgccgc ggtttgtcga gctgttgaac catgtcctgt
     4861 aacgtgatga ctccctttac cgttgttccg gatgtggctt catcttcgag tttttttgcc
     4921 tttgcagcat ccaggtcaaa tccaatgact ttgtaaccat gatcggccat gttcagtaaa
     4981 aaattactgc ccattacgcc aagtccgacc attccaaaat catacagacc gttttccatt
     5041 tcgcaaattt tttaagagtg tgcaagttag ttaatgagag tgaatgtgaa agtgacgaac
     5101 atgaattcta cgggaagttg tttctcacag atggcacaga tgtgcccgga tttttggcta
     5161 aaggtggcgg actattgctt gatcgaattt cagtcagggt acttattcgg cttgaatcag
     5221 tgagtatctg tgtgatctgt gagccctatc actgtccaat aaaaaatcct atcttcgctg
     5281 acaatttatt ttttgatgta tgaatagtgt tgcgaatgga gcaccaacct tgactgcaaa
     5341 agacttcgtt accgaccagg aagtgcgctg gtgccctggg tgcggggatt attcgatttt
     5401 agcgcaggta caaaaagtaa tgccgacgat cggcgtgccg agggaaaata ttgtgatcat
     5461 cagcggcatt ggctgtagca gccggttccc ctattatatg aacacttatg gcatgcactc
     5521 aattcacggt cgcgcaacgg cgatagccag cggcctgaaa gccgcccgcc cggatctgag
     5581 tgtatggata gttaccggcg acggtgacgg attgagcatc ggtggtaacc acaccatcca
     5641 tctgctgcgc agaaattttg acgtcaacat tttattgttc aataaccaga tctatggctt
     5701 aacgaaaggt caatattctc cgacttcgga acgaaataaa gtgaccaaaa gcacgccgct
     5761 cggcagtatc gaccaaccat tcaatccatt ggcgcttgct atgggcgctg acgcaacatt
     5821 cattgcccgc agtatggacc gggacccgaa acatctccag gaaatgcttg tgcgtgctaa
     5881 taaacacaag ggctcatcgt tcttagagat ttaccaaaac tgcaatattt tcaacgacgg
     5941 cgctttcgaa gcgtttactg aaaaagcaac caaacctgaa gaaacgttgt tcctggaacc
     6001 aggcaaacct ttactgtttg gcgctgcgaa aaataaagga gttaagttag acggcttcaa
     6061 acctgtcgtc gttgagttgg gtgttaatgc aagtgtggac gacgtttggg tacatgacga
     6121 atttgatttt tataaagctc agatattggt caggatgttt gatgatccaa aacgcgacgg
     6181 ccacctgccg cggccttttg gtgtgttcta tgaaaccgag cgcggctgtt atgaagacat
     6241 cctgcaacaa cagattgata ctacgatcgc agcaaaaggg catggcaacc ttgaaagact
     6301 tttaagagga agcgaagttt gggagatcat ctaaaccaat ttgaaacgcg gtttatcgtt
     6361 taactgttta gtcaacgcca aacgaatcac gcctcaattt atctttgata aataaattat
     6421 ggtcctttgc accattttcg ttttgccata ataacaccaa aatctaacag ttatttttta
     6481 caatgacagt cacaatcgcc gactacaatc cggagtggcc gaaaatgtat gaacatgaag
     6541 tggcgctggt gatgcaggca tttcctataa acaattgcct ggtcgagcac gttggaagta
     6601 cgtcagtaaa agatctgaag tcaaaacctg tgatagatat tatggtgggc gtggaggtct
     6661 tgcctgatga tatcactccg atcgaagagt atctcaaacc attcggctac gaatacatgg
     6721 agaggtacaa ccaacttatt ccggaacgaa gattctttca aaaagagcag aatggagtac
     6781 gcacccacca gatacacctc acctcgttcc attccgactt ctggcagaaa cttttgtttt
     6841 ttcgggacca attgcgcgaa aatccgtccc tacgcaaagg ttatgaaaag ttgaagttag
     6901 agctggcaaa aagatcctgg gattccgtga acgactatgc gagtgctaag gatgaatttg
     6961 ttgagtccgt tgataaaaaa agaaaagctc ttaagcttaa gatgcagtca acgtctgcag
     7021 aacgttgaac tgcttatcga gtatgaccat gttcgcattt cttccagctt cgatcaaacc
     7081 cagttccatt tcttttctta ttacccgcgc cggataaaga ctgcacatcc ggagtgcctc
     7141 atccacatcg atcccacatt ggtcaacgaa attctttgca cacttgttca tcgtcaaagc
     7201 agagccgctc aaaatgccgt tggcagtata tttatctcct tcaagcgtgt gcttatagaa
     7261 cccttcggtt gtttcggtaa ccgcatcggt aatcgcgaat aatcggttcc ccataatttt
     7321 ttttgcaatt cggatcgcag gaaaactcac gtggtatccg tccgggacaa tgctggaaaa
     7381 aacggaagga tgatcgagga tggcgcccac cataccaggg tcacggtgct gcagtgcgct
     7441 catcgcattg tataaatgcg ttgccgtttt tatgccgtta ttgaaggcct cggtcgctct
     7501 ttcataactg gcgttggtat gtccagcaga aacgagaacg tcataagaat gaataaggcc
     7561 tataatttcg tcgctgcaaa cttcaggcgc taatgttatt attttgatga cgtcttttcc
     7621 atagtcaagt aattctttaa ctttctcaac catcggaata aatatccact cttcattgtg
     7681 agcacctcgt ttttctttgc tgatccaagg accttcgaca tgtaatccta aaacgcctgc
     7741 tccacctgca tgccaataac ttttgatcgc gtcaatacat ttaaagatcg tcgcataggt
     7801 gtttgtcgca acggtgggca tgcaatgcga tgcgccacct gacttgctgt attcataaat
     7861 agctttcaca gtttctgcat cagggtatgt tgccagtaat cttttatatg cgccgtacaa
     7921 ctgcaggtcg ataaaagccg gggcgatcac cgaatcttta aagtcaatga tttcgcaacg
     7981 tctatcgacg ttttgaaacg gaattacgtc ctcgattttt gcatcatcta ctatcacggc
     8041 atgcagcggt agtgcgttgt accctgtaaa aattgttgaa gcgatgtatg cttttcgatt
     8101 actcattagt gatgatgaac ctgtcggcat ctttccaaaa aggaaatctt ttccttgttt
     8161 cttcgagatg ctccttattt aactgtgttg tgaaaacatc ttcttcatgc tgtttatggt
     8221 acaatatttc tcccatggcg ttcaccacca tgctgtcacc tgcataatag acaccggtgc
     8281 catcttcgcc tacacgattc acaccgatca cgtaacactg gttttcaatg gcgcgggcct
     8341 gcaataaagt tttccaggca agagatcttc gctcaggcca gtttgcaaca tagatcaata
     8401 catcatattc cagcgaggtt tcagcttttt gtaacaagga cgaagagccg ccgtccgtgt
     8461 cggaaaggaa aggaggcgac tgacgtgccc aaacaggaaa tcgcagatcg taacaaacct
     8521 gcaaatttat tttccatcca ttcaccgacg cgatcaatcg cttactgccg ctgctgtaat
     8581 gattgtgctc atcaccgtag gcgaaaaggt ggcgcttatc gtaaacacca tactcgcccg
     8641 ttggcagcat ccaaattaaa cggttaaaat aaaggtcagt cgcc
//
LOCUS       DASQJI010000149        28588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_320763,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000149 DASQJI010000000
VERSION     DASQJI010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 28588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28588
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320763"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(526..1959)
                     /locus_tag="VEV83_04435"
     CDS             complement(526..1959)
                     /locus_tag="VEV83_04435"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HYK44390.1"
                     /translation="MKKLWILISVLVSGACWYLSFDLSGDFWYLLWLAPVPVLLISFR
                     ASAGLSFAVAFLSFLIGRLSWVPYLLSVLPLLLAIVFTVLFPIVFAVVVVLTRKIVSK
                     QISWSVFAFPVLWCCFEFLMFKFSRDGTAGSIAYSEANFLPAIQIASVTGIIGVSFLV
                     TLFPSAVALVIHKRYSRKLPLLLALIIVVVFLSFGMIRLNQSNNETKSITMGLAVVDE
                     KFHSETHQPKAADVMRLASMYAGQIAALAQNGAQVIVLPEKMINIKDGFGDSARNMLE
                     EAAKVNHVTVVAGYTQFNDGKSYHNNAWVISANGSFLASYQKVNLFEGEAISGFVGGD
                     TISTFDLLNIPSGLAICKDMDYDGFMRMYALQKAQVLYVPAWDFIRDGWLHSRMAILR
                     GVENGYAIVRTARQGRLTVSDYRGKVLYEASCENNKTASLVGKVNVVSTRTVYSRFGD
                     WFGYVVVGGAIYFLIVFFVKDRGLAKK"
     gene            complement(1966..3564)
                     /locus_tag="VEV83_04440"
     CDS             complement(1966..3564)
                     /locus_tag="VEV83_04440"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYK44391.1"
                     /translation="MQRIYLVAIATAFLFSCNTQTKNTVAKPVAEAPAIEGNFNYASG
                     IKFDSSSIQKFLDDKPSFKEFRKDFQAFYGGNQYNYVWYDKNGLIESAGILVSDAANV
                     ATEGVNPDIPYLDSLESLLESNSESKNELAPDLNTELMLTGIYFSYAKKIWAGSLNTK
                     TDSLEWFLPKKKLSYATLLADNLKNDSIGETKGPVVAVQYQGLKKELTHYRDIDSKGG
                     EVFVPLLKKPGIVRPNTSSPEVVLIRRRLMQLGDVIDADTSAVFDSKLAAVISDIKGR
                     YGLKKDSLITNAFITEINVPAKKRVEQIMVNMERLRWIPPRDSSSHEFILVNIPEYNL
                     HYYEEGKDVWQCNVVVGKPMTKTVIFSGKMQYVVFSPYWNVPPSIINKEIKPAMKRNP
                     NYLASHNMEWNGGRVRQKPGPRNSLGLVKFLFPNSNNIYLHDTPSKSLFTEDKRAFSH
                     GCIRVAKPKDLAMRLLRNYPEWTSEKIDAAMRAGTERTVTLKPTIPVYIGYFTAFLDN
                     DGQLNFRSDVYNRDGSLLNMLMQQ"
     gene            complement(3751..4521)
                     /locus_tag="VEV83_04445"
     CDS             complement(3751..4521)
                     /locus_tag="VEV83_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK44392.1"
                     /translation="MSTGNYADVNGIKMYYEIHGEGNPLVLIHGGGSTIQTTFGTILP
                     MLAKRYKIIAVELQAHGHTSDRDAPETFQQDADDVAALLQQLNIRKASIIGFSNGGST
                     TLQIAIRHPEIVNKIIVVAGAYKREGFISGFFDGMVAATLDNMPQHLQDAFLAINPDP
                     GALFNMFNKDKTRMINFQDWNDNDLRSIKAPALVISGDKDVTLTEHALEMSRLIPNAE
                     LLVMPGVHGSCLGEIETIVPGSKQPEITVQLVEEFLEK"
     gene            complement(4728..5447)
                     /locus_tag="VEV83_04450"
     CDS             complement(4728..5447)
                     /locus_tag="VEV83_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EcsC family protein"
                     /protein_id="HYK44393.1"
                     /translation="MSNYSKQISEELIHWQKKMLRKPSFTNRLAKKMQTKMNSLIPEK
                     AHQAITATIKQMIRVVLFGAGVFTSKPDKKSSLEKKETIIRERIKMYRTTGAAEGGLT
                     GAGGILLGLADFPLLLGIKIKLLFDIGSLYGFNVNDYKERVYILYIMQLAFSSQEERR
                     NVYLKMANWEEHAKLLPDDIHAFDWRTFQQEYRDYLDIAKMAQLIPIIGAPVGIIVNY
                     RLITKLGETAMNAYRMRLIKP"
     gene            5560..6618
                     /gene="cax"
                     /locus_tag="VEV83_04455"
     CDS             5560..6618
                     /gene="cax"
                     /locus_tag="VEV83_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HYK44394.1"
                     /translation="MSKKDIIIGIAALLMTVFAGVATYFEINSIFTFAVTAVALVLLA
                     MNVGHATEQLGNRMGPAVTGILQSALGNLPELFVAIFALRAGLDKVVQAALVGSILGN
                     SLLVFGLAVLFGGLKNGTQKFNSEPPKMMATLMLLAFAALAIPSLASRLHTPAAANIN
                     KLDIMVAIVLLIVFVASLTFSIKGDKAVVPEERREPHEASWSLPITVLVLLAAGTGAA
                     FVSDWFIEALQPAMKILGINEVFAGLVIVALAGNAIENLVGIQLAIKNKADYAVSIML
                     NSSLQIALGLFPLLLLLSFFLGGAILSFVLSPLLLAALALAVLVSAFVVFDGESIWLE
                     GVALIGLYCIIAAAFWWG"
     gene            6967..8526
                     /locus_tag="VEV83_04460"
     CDS             6967..8526
                     /locus_tag="VEV83_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44395.1"
                     /translation="MTSNRFTDALFQLIRSLEKSEKRHFKLYIRRSSSKEDLKIIQLF
                     DALDKMHDYDEKALLKKLAPITKPQLSNLKAHLYKQVLASLRLLKTSVNIDLQLSELL
                     DNARVLYNKGLKMQSFKMLERAKELAKSNHKYNFLAQVISLDKKIETLHITRSSLEKT
                     ELLATEAAEISGHIDKVIKLSNLALLLYRWYVQNGYARNKEDEKGIRAFFKENLPDNA
                     GTITDFYERLYLYQSYCWYAFIRQDFLMYYRYSQKWIDLFDEEPEMRRVETGHFVKGM
                     HTLLNAHFNLRNFQQFQAVLKKFEAFSKSTAANTNDNFRIHTFIYIHAAKINWHLMTG
                     GFAEGLALIPHIEANLAEYSAYVDRHRILVFNYKIAMMYFGSGDYERCIDYLQRIIND
                     HVSLRIDLQCYARLLHLMAHYELGNDSIIESLIKSVYRFMAKMQNLTVVEEEIFKFIR
                     NSFKVSPELLKPSMKEFLNKIKHLEKNRFETRAFAYLDVISWVESKVYQKPLSEVIHE
                     KYIASKKRIYR"
     gene            8643..9158
                     /locus_tag="VEV83_04465"
     CDS             8643..9158
                     /locus_tag="VEV83_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44396.1"
                     /translation="MSTFLKLQVAKRFVLSLLALTLLSFASRAGGESYEIYLNNKLIC
                     KQVNGKFLCGDKGLQLTKTNMNDNLVITYNHCGRVGTGRTIVAKDEHDRSLKEWKFED
                     NASITIPVKQILSLQKNSVVNLYYFSTQYLPKGRMLTSINIAEKETTQNDRGKDWFVA
                     AMFMLVCFRLV"
     gene            complement(9235..9876)
                     /locus_tag="VEV83_04470"
     CDS             complement(9235..9876)
                     /locus_tag="VEV83_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK44397.1"
                     /translation="MIKVEYFTFNPFAENTYVLSNEKGDALIIDAGCYFTAEEKTLED
                     FIASNGLKPVQLLNTHCHIDHVFGNEWVHKKYELELYMHAGEKMVLEYAPAAGNMYGL
                     QFTNYKGPVHYLNEGDEIWSGDDKLTILLTPGHSPASICFYCEAQHFLIGGDVLFRES
                     IGRFDLPGGNEQQLLKSIREKLYVLPDQTIVYPGHGESTIIGHEKKYNPFVNG"
     gene            9927..13373
                     /locus_tag="VEV83_04475"
     CDS             9927..13373
                     /locus_tag="VEV83_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44398.1"
                     /translation="MRDMQSKSLRPEIVLGITLLFLPFLLAAQVNTVEFGKNRVQYEK
                     FTWKFYQSPNFNVYFNQGGLELAKYITQVAEEELDSIETDIDYSLQRRTTLVLYDNYD
                     DYKSSNIGLGIDWQNAGGLTTLVNNKIPLYFDGNHNTLHLRIRQGIARILTDNILFGD
                     DIGEFASNQALLDLPKWLTDGYVDYIAQHWSTENDDELKNAILGGDYNNFYQFAFDKP
                     VLAGHAFWYYIARKYKPQNVTYFLYLARLYKNLNTASERICKKKFKEVLQDFMAEEQT
                     RYVADIKQRRNAPKGKLSVVEDLTKSDFYHFNANPNPKNNSYAVVQFTKGKYKVKYYD
                     NVFDEHTLLEFGVRTISGDMNPNMPILAWDGKGSRLLCMYTKEGKTYMFVYDVIANIK
                     RFKQEVIGFEQVLDAGFIFNANTLLLSAVKNGHTDIFTYRIDNEDIKQVTNDIYDDLD
                     PTFVSFPNRLGIIFASNRPGVNAPNSDTVLPSRNRFNIFLADINNNSEFRQITQLTNL
                     KYGNARYPMQYNQNHFTFVSDENGIGNRWAGFFTTQPGGIDTLYYVGEDILRNPDPNE
                     MDSTLRAWQKAQPDSISYFKVYQDSTYTFPITNYQSSLLETRVSGNNDQVSEVRKEGD
                     YKFLYKLRVDSATLRKRNVNARPTDYVRRMITEERLAGGQSVQIAPTDTAQNNNNQFQ
                     NEFEEEKKDSATNVSNVAPVVPEYTAPRPDYLAKSKLYDYKLKFEADYVLAGFSNNIL
                     ITRYQPFGGYSQTGPIYLNNGNAVNFTFRVGVSDIMEDVKLIGGVRLGTSLDDKDAFL
                     TFQNYRKRIDWGLTYYRSNVSNYDGFYRGIDYNTSVDYNLLDNVVITNLYQANVSYPF
                     NEVNRLSLVMGLRKDIGTLRPEYAGVALYPDVLKLPDSVSSTIISRLEFVHDNTIHPA
                     DNIWNGFRWKIYTELFVPANAASALKNKNTINVGIDARHYLKIYRNFIWAVRAAADFS
                     FGDAKLIYYLGGEDGWVFPKFNHLDADTRVPYSFQTLALNLRGFNQNAANGSNNAVIN
                     SELRLPVFTTLLSSPINNAFLRNFQLVQFIDLGTAWAGPVSAIKRPTVIYHLDPPPPA
                     GLSPLDVKIKAGGIGPFAGGYGFGARSTLLGYFLKADIGWQMRGIFRGPAVFYFCLGF
                     DF"
     gene            complement(13437..13820)
                     /locus_tag="VEV83_04480"
     CDS             complement(13437..13820)
                     /locus_tag="VEV83_04480"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HYK44399.1"
                     /translation="MQTDLNAGPAQSFVAAVANAFHGIIDFFRLERNGRIQGLITIIV
                     LLASAVLRLTSIEWIVVLLCICAVLGLEMVNSALEHLCNLVQRDFHPLVKKIKDVSAG
                     AVLVASIISVVIGLIIFIPKIFALV"
     gene            complement(14000..15406)
                     /locus_tag="VEV83_04485"
     CDS             complement(14000..15406)
                     /locus_tag="VEV83_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK44400.1"
                     /translation="MKIKMILPALTEAKSPFWRPIKYSLFPPLGLATLAAYCDENDDI
                     NLQDEHVEELYIDDEPELVVIQVYITNAFRAYKLADHYRKKGAYVCLGGLHVTSLPDE
                     AMQHADTVFVGPGEECWPRFLKEYKSGNAQHVYSSIERTIENIPPVRRDLIKRHLYLV
                     PNSIVVSRGCPYHCDFCYKDAFFEGGKSFYTQKVDAALAEIERLQGRHLYFLDDHLLG
                     NQKFASALFEGMKGMNRVFQGASTINAVLHGRLVEKAAEAGLRSLFVGFETLNGNNLA
                     QSNKKQNVGQDYNEGIKRLHSLGVMINGSFVFGLDDDDKSVFMRTVEWAVKNALTTCT
                     FHILTPYPGTRLFKKMEEDGRILHRNWDLYDTRHVVYKTAGLNERELKKGYDDAYRSF
                     YSWPNIFRASMAHDNFKHIIKHFTYAGGWKKFEPLWNFLIKTGALNKMLPLLEAVLSR
                     TKSADSTQKQLSPFPAIA"
     gene            complement(15403..15975)
                     /locus_tag="VEV83_04490"
     CDS             complement(15403..15975)
                     /locus_tag="VEV83_04490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44401.1"
                     /translation="MKSSLFIAHFAAAVILTCGILLVYASVQQAHRSAANDPQLQLAR
                     DLGIALNSGKTVNNLFPKDTIDIAQSLAVFAETFDEQGNPLRSTGLLNGQLPQPPAGV
                     LDFTKNNQEDVITWQPENGVRMAMVYEKVNAAGTGFVAVGRSLKEVELRENKLVRMVA
                     IAWIACLAVLLVHLLVQIYLFRKASIKQAA"
     gene            complement(16141..16440)
                     /locus_tag="VEV83_04495"
     CDS             complement(16141..16440)
                     /locus_tag="VEV83_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HYK44402.1"
                     /translation="MKNPIENLNKVFDSRIRLGIMSALMVNDSINFNDLKALIQVTDG
                     NLASHIKALEESGYIKVQKGFIGRKTNTLYSATKAGEKAFRFHLDALEQMIKRMN"
     gene            complement(16450..17091)
                     /locus_tag="VEV83_04500"
     CDS             complement(16450..17091)
                     /locus_tag="VEV83_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44403.1"
                     /translation="MNATEKLSNELRDIKQMMERSSRFISLSGLSGISAGICALIGAW
                     FARDILEQRSALDGANSKTDADSVLRGDLLNSGLLQIAVLTFMAAVFFAFIFTYRRSR
                     VTNVPIWGAQAQRVLVHVAVPMIAGGIFLLALLKNGVYDFIAPGCLIFYGLGVLNASK
                     FTLPETKWLGYSEILLGIINLFFTGQGLYFWAVGFGVLHIIYGAAMWSKYERN"
     gene            complement(17358..18491)
                     /locus_tag="VEV83_04505"
     CDS             complement(17358..18491)
                     /locus_tag="VEV83_04505"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYK44404.1"
                     /translation="MKRALYFITGIILVAACHKKETGAFTITGKFKSAPGDTVYLQKL
                     SYQTADMKTVDSVKLAADGSYKLSSADTQQNLYLISFKNNPAVIVVNDSKDIHVDVDM
                     NGYHEPEVSGSEATKQLYGFIGDYFQKDSMISATYYQLDTIGAEAMKDTALIKMLQMK
                     YTKEINALDELFRNFIAKSNNPAGICFVLDKAKGIVSPDELYALVEDASKRFPQHNGL
                     AIFKSAITQSVRGGSAGSSYTLLNQQAPDLTMKDVNGKNLSVSTFRGKYLLVDFWASW
                     CAPCRAQNPVVVAAYNKFRNKNFQILGVSLDADKGDWMRAIKADNLNWPQMSDLKHWE
                     SSAVTTYQFEAIPFNVLIDPAGKIIAAGLRDEELDKKLSEVLQ"
     gene            complement(18508..19953)
                     /gene="gatB"
                     /locus_tag="VEV83_04510"
     CDS             complement(18508..19953)
                     /gene="gatB"
                     /locus_tag="VEV83_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HYK44405.1"
                     /translation="MKGEQKYEAVIGLEVHARLLTNSKLFSSDANAYGSEPNENVSVI
                     TLAHPGTLPKTNKKAVEHAVKMGIACGCTIKEKNYFARKHYFYPDLPKGFQTSQHAAP
                     ICLGGNLKIKTSAGDHDVILHHIHLEEDAGKSIHDMDDAFSFIDYNRAGTPLIEIVTE
                     PCMHSAEEAGIFLTELRKLVRWINICDGNMEEGSLRCDANVSLRLNGDQKLGTKVEIK
                     NLNSIRNVRKAIEFEIERITAILDDGGIVLQQTRSFDAGTDTTFAIREKEEANDYRYL
                     PEPDLPPLHLTKDYVNTIRTSMPALPHELIQRYQQEYNLSEYDAAQLCLEKEIADYFD
                     STLEHTTNYKAVANWINGPLKQLLNEQTISLSDIKPSPRKLAEIIKLIEDGHISFSAA
                     SSKLLPAVLGNEDSPVFEMAKDLNLIQTTDAGELDEWIRTVLNKMPDKVAEYRKGKKG
                     LIGLFVGEVKKISKGKADPQTVTAMLEKELN"
     gene            complement(20129..20587)
                     /locus_tag="VEV83_04515"
     CDS             complement(20129..20587)
                     /locus_tag="VEV83_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HYK44406.1"
                     /translation="MDESLQQVWQKVTHYCAYQERCHAEVREKLFSFHLKGREVETLI
                     AKLIEENYLNEQRFATAFAGGKFRIKHWGKQKIRLGLKQKRVSEYCIRKALDAIDNSA
                     YQRTFARLAEKKLQLLKSEKNIFIKKRKLRDHLLQKGYESALITEWFKNI"
     gene            20664..22643
                     /gene="pulA"
                     /locus_tag="VEV83_04520"
     CDS             20664..22643
                     /gene="pulA"
                     /locus_tag="VEV83_04520"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:TIGR02104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051060 - pullulanase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pullulanase"
                     /protein_id="HYK44407.1"
                     /translation="MKKFIPGFVFFFIVLLANAQDYDTYPVYHGQLGLMYSKSASSFR
                     IWSPVAEEAKIVFYKDGAGGTVVQTESMKKDDGGTWYIRINKDLKGAFYTFSVKVNDT
                     WLNEVPDPYAKAVGVNGKRAMVVDLKETDPPNWNSDKSPPFSKNNYATDAVIYELHVR
                     DASIDDNSGIQHKGKFLGLTETGTKNNARLSTGLDHLKELGITHVHLLPCFDFSSIDE
                     SKPDSAQYNWGYDPLNYNVPEGSYSTNPYDGVTRIKEFKKLVQTFHSNGLRVVIDVVY
                     NHTGVTANSNFNQLVPGYYYRHKSDGSFSDATACGNETASERPMFRKFMLESVMYWVR
                     EYHVDGFRFDLMGVHDIETMNLISDSLHKIKPDIILYGEGWTAGDCPLPDSLRALKPN
                     AYKLHGIAVFSDDIRDGIKGSVFDINDRGFASGKAGMEESVKFGIVASCSHPQVDYQK
                     VNYSKAAYAAAPWNTITYCECHDNNTLWDKLSLSYPTATEEARVHMQQLALTIVLTSQ
                     GIPFLHAGTEFLRNKKGVENSFNKPDSINEIDWDAKTKYRSTTNYLQYLIRLRKEHPA
                     FRMTTDEGIKKNIVFDATARAGTIIYTINGSAAGDKWKRIWIAFNGTDKELSIPLPQG
                     SWKTAVDSNGMHEMNRPVTGQLNLKGYSSAILYED"
     gene            22828..23712
                     /locus_tag="VEV83_04525"
     CDS             22828..23712
                     /locus_tag="VEV83_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK44408.1"
                     /translation="MTTRRTFIKSTTFASAALLVKPSVLNFNHSYIGLQLYTVRDQMA
                     KDPQGTLEQVAKIGFNSIECAGYAKEKFYGMDSTQFSALLKNTGLIMPSAHYRLGLEK
                     EKDGTDTQGTILHDWQRAVDDAAAVGVKYMVCAWLSETERGGIDHYKEMAGQFNTAAE
                     TCKKAGIQFCYHNHDFEFVEQNGQLPYDVLLANTDKDLVKLELDLYWVTKAGHDPVQI
                     FETHPHRFPLWHVKDMDSTPKHDFTEVGNGTIDFKRIFKFSGKAGLQYFFIEQDKCPG
                     SPFDSITKSITYLKQNLI"
     gene            complement(23733..24518)
                     /locus_tag="VEV83_04530"
     CDS             complement(23733..24518)
                     /locus_tag="VEV83_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HYK44409.1"
                     /translation="MCYDVAYTAKASELSTWVPELIFDEDVQLLLDGTHIIGHDYREH
                     PIIYKSRQDQKLHCRLMEWGCIPYYIKNEHAYLRQRAGMLNARSERILEDKTSYWYEI
                     RNRRCLIPVTGFYDHRGIKGWKKKVPYHIKLKNHEMFFIAGLYSVAELPDTGTGEMIK
                     RWTYTLITRPANDIMRNIHNDGENKWRMPLMLPFEMSMEWLATELTVDRYKEILSFEM
                     PDAELDYWPVWTIRTSKDRPDGKAKNVYFEWEKLPELGEANPD"
     gene            24942..25346
                     /locus_tag="VEV83_04535"
     CDS             24942..25346
                     /locus_tag="VEV83_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44410.1"
                     /translation="MRKRCNLFLISLSLLACFTFSCAKHLNNPEPSERLVSYSLSSSN
                     YQPFSDITYINGDGAQASASAADSTSYWSTTVATSMNPFNAHMEVKGFNNTADTLRFT
                     ISIYLSGVLQASKQDSVLQFSTFDSEVATVIQ"
     gene            complement(25505..25577)
                     /locus_tag="VEV83_04540"
     tRNA            complement(25505..25577)
                     /locus_tag="VEV83_04540"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25542..25544),aa:Phe,seq:gaa)
     gene            complement(25820..26422)
                     /locus_tag="VEV83_04545"
     CDS             complement(25820..26422)
                     /locus_tag="VEV83_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HYK44411.1"
                     /translation="MPENISAEDSYLLRAGILAEFGKIICISTGYFYENADKKTCLKI
                     KSIFGDDEKALLQSFIKITDAFYKINNRFQFAGHNIREFDVPYICRRLLINNQSLPYY
                     LQFHGAKPWEIEMVDTLQWWKFGDYKNYISLDLLATVLDIPTSKADMDGSKVRDVYYE
                     DKDLERIRVYCEKDVVVAANVILRFKHLPILEDGCVAIVK"
     gene            26609..27595
                     /locus_tag="VEV83_04550"
     CDS             26609..27595
                     /locus_tag="VEV83_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44412.1"
                     /translation="MSYSNYPSSGNEPASQPRDNRKLIYGILIAALVGTWGYIIYDKN
                     KTNERIQQVTTQYTAADSSRSAVETEYNDALARMDSLTGSNTKLSGELAARKTEIDDL
                     KSRIKSELGKKNADLKKAKSMIAELNGKITDLLAQVDQLKQENQTLTVANTDLTAQRD
                     TLTVQKAAVEQTLATTTAEKEHVEDVGSTLHASNINIAALDIKGSGKEKTTSTAKRAD
                     VFRISFDLDENRIAPSGSKELFVCVTGPDGHPITIPANGSGTFQTREEGEKVFTNKVD
                     VNYEQGKRMPVSFDWKPDNGKYQTGSYKIEIYQNGYKIGEGVKELKKGGLFG"
     gene            27689..>28588
                     /locus_tag="VEV83_04555"
     CDS             27689..>28588
                     /locus_tag="VEV83_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HYK44413.1"
                     /translation="MIERWLNGKTLIFIISAAIVSGTIFYSSYLAKKIGNDEKKRVET
                     WVEAQRTILNASDEVSLNLASKISSENTEIPIIETNERDSITNNYLNLDSNKIKHDST
                     YLPKKLAEFKKQHEPIILVVSEKPYYVNKYYYGDSVLQREVQYYPIVQLIIVGLFLVV
                     TIMAQRTAYRSEQNQLWAGMAKETAHQLGTPVSSLKGWVEVLKEMPGNEKLSAEIEKD
                     VNRLELITDRFGKIGSNPQLEQKNLVEQVHNMIDYIKRRAAGKVKFNFDTGNETNIPA
                     MISPPLFDWVIENLLKNALDAIEG"
BASE COUNT         7999 a         6512 c         6074 g         8003 t
ORIGIN      
        1 ttaggtggca ctctcagttt ttaaaccagg tagcaagttg ctatatggaa ggctgtcttc
       61 aaatgaaggc ggccttttta tgcaatctca tgtctgggtt gtttaatctt caacccttcc
      121 agggttgcgc tccgccttca tcgtgcgttt cgttggattg catccaacgc tattcaaatt
      181 cagcccctcc ggggcaagtc gtttttgata caaactgata acacaaataa atttcgtctg
      241 ttcgctctgc gcgaattttt ttcatttgcg ctcgtgatga gagttatttt ttcgctaacg
      301 ctaatgaagg cggccttttt atgcaatctc atgcctgggt tgttagtgtt caacccttcc
      361 agggttgcgt ttccggcctt catcctccgt ttcgttggat tgcatccaac ggtattcaaa
      421 ttcagcccct tccgggcaag tcgtttttga tacaaactga taacacaaat aaatttcgtc
      481 tgttcgctct gcgcgaattt ttttcatttg cgctcatgat gagacttatt ttttcgctaa
      541 ccctcgatcc ttcacaaaaa acactatcaa aaaataaatt gcgccaccta ccacaacata
      601 tccaaaccaa tcaccaaacc ggctgtagac ggttcgggtg gaaaccacgt tcacttttcc
      661 aacaagcgat gctgttttat tattctcaca actcgcttcg tataaaacct ttccccggta
      721 atcactcacc gtcaatctgc cttgtcgcgc cgtgcgaaca attgcatagc cattttcaac
      781 accccgcaga attgccatgc gtgaatgcaa ccagccatcg cgaataaaat cccacgccgg
      841 cacataaaga acctgcgctt tttgaagagc atacattctc atgaatccat cataatccat
      901 gtccttgcaa attgccaggc ctgaagggat attgagcaga tcaaaagttg agatcgtgtc
      961 cccgccaacg aacccgctta tcgcttcgcc ttcaaacagg ttaaccttct ggtagcttgc
     1021 aaggaaactt ccattcgccg agatcaccca cgcattattg tgataactct tgccatcgtt
     1081 aaattgtgtg taaccggcta caaccgtaac gtgattaact ttcgcggctt cctccaacat
     1141 atttctcgcc gaatctccga agccgtcttt tatgtttatc attttttccg gaaggacaat
     1201 cacctgggct ccattctgcg caagcgctgc gatttgacct gcatacatac ttgccaaacg
     1261 catcacatcc gccgccttag gttgatgtgt ttccgaatga aatttttcat caacgacggc
     1321 aaggcccata gttatgcttt ttgtttcatt gttactttgg ttgagcctta tcatcccaaa
     1381 tgaaagaaag acgaccacaa tgatgagagc aagaagcaac ggcaattttc ggctgtatcg
     1441 tttatgaatt accagcgcaa ccgctgaggg aaaaagtgta accaaaaaac ttactccgat
     1501 aatgccggtg accgacgcta tttgtattgc cggcaaaaaa ttcgcttcgc tgtatgcaat
     1561 gctgcctgca gttccatcgc gcgaaaattt gaacatcagg aattcaaagc agcaccacag
     1621 aaccgggaat gcaaaaaccg accagcttat ttgctttgaa acaatttttc tcgtgagtac
     1681 aacgacaact gcaaaaacga tcggaaacaa aactgtaaaa acgattgcga gtaagagggg
     1741 aagaaccgac aagagataag gaacccaact gaggcgcccg ataagaaaag aaagaaacgc
     1801 aactgcaaaa ctcaggcccg ctgaagcccg aaaagaaata agcaatacag ggaccggtgc
     1861 taaccaaagc aggtaccaaa aatcacctga aaggtcgaac gacaaatacc agcacgcgcc
     1921 ggagacaagt acgctgatca gtatccataa ttttttcatg cggtgttact gttgcatcag
     1981 catatttaat aaactgccgt ccctgttgta cacatcagaa cgaaaattca actggccgtc
     2041 attatcaaga aacgcagtga aatacccgat ataaacaggt atggttggtt ttagcgtaac
     2101 ggttctttct gtgccggcac gcattgccgc atcaattttt tcagaagtcc attcggggta
     2161 atttctcagt aacctcattg caagatcttt tggttttgca acccggatac atccatggct
     2221 gaacgccctt ttatcctctg tgaacaaaga cttggaaggc gtgtcgtgca ggtaaatatt
     2281 gtttgagttt ggaaataaaa attttaccag accaagcgaa ttgcgtggac ccggcttttg
     2341 cctcacgcgg ccaccattcc attccatatt gtgcgatgcg aggtaattcg gatttcgttt
     2401 catcgcaggt ttgatctcct tattaatgat gctgggcgga acgttccagt acggactaaa
     2461 aacaacgtat tgcattttgc cgctaaagat cactgttttc gtcatcggtt ttccgacaac
     2521 tacattgcac tgccaaacat ctttaccttc ttcataatag tgcaaattat attcgggaat
     2581 attaacgagt atgaattcgt gcgaactgct gtccctcggc gggatccacc gcaatcgttc
     2641 catgttcacc attatctgct caacccgttt ttttgcaggc acgtttatct ccgtgataaa
     2701 tgcatttgtg atcaacgaat ccttctttaa cccatatctt cctttaatat cgctgatcac
     2761 cgcagcgagc tttgaatcaa atacggcgct tgtgtcggca tcgataacat cacccaattg
     2821 cattaaacgc ctccggatca aaacaacctc cggcgaagat gtgttcggcc tgactatgcc
     2881 cggctttttt aaaagtggaa cgaagacttc gccgcctttg ctgtcaatat cgcggtagtg
     2941 cgtgagctcc ttttttaagc cctggtattg caccgcaaca acaggccctt ttgtttcgcc
     3001 aatgctgtca ttctttaaat tatccgccag cagagttgca tatgaaagtt ttttcttcgg
     3061 caggaaccat tctaaggaat ctgttttagt gtttaaggat ccagcccaga tcttcttggc
     3121 gtaggaaaaa tatattcctg tgagcattaa ttcagtgtta aggtcaggcg ccaattcgtt
     3181 ctttgattca gagttgcttt cgagtaacga ctcaagactg tcgaggtaag gaatgtcagg
     3241 gttcacacct tctgttgcaa cgtttgctgc gtccgacacc agtattccgg cgctctcgat
     3301 caatccattt ttgtcgtacc aaacataatt gtactgattg ccgccataga acgcctgaaa
     3361 gtcttttctg aattctttga atgatggctt atcgtcaaga aatttttgga tcgagctgct
     3421 gtcgaatttg atcccggatg cgtaattgaa gttcccttct atcgctggtg cttctgcaac
     3481 cggttttgcg acagtgtttt tagtttgcgt attgcatgaa aaaagaaagg cagttgctat
     3541 ggcgactaaa taaatccttt gcatggtact tgaatgtaat tacaatcctg tcgggcacct
     3601 ttggaggatg tttgaatagc cctgttgtat gtatttcaaa aattgtgcga tcaaatgtaa
     3661 ggatgaatca gcaacaaatg atgatgatga cagcatcacc gttgggcttc tgaaaagatg
     3721 ccttcataca aagcaattgt accgctcaat tcatttctcc aaaaactctt ccaccagttg
     3781 taccgtgatc tcaggctgtt tacttccagg tactatcgtt tcaatttctc cgagacacga
     3841 accatgtaca ccaggcatta cgagcaactc cgcgtttgga ataagccttg acatttccaa
     3901 tgcgtgttca gttagtgtaa cgtctttgtc gccgctgata actaaagctg gcgctttaat
     3961 ggatcgcaga tcattgtcgt tccaatcctg aaaattgatc atcctcgtct tgtctttatt
     4021 gaacatgtta aacagtgcac caggatccgg attgatcgcc aggaaagcat cttgcaagtg
     4081 ttgcggcata ttatcgagcg ttgcggccac cattccgtca aagaaaccag agataaatcc
     4141 ttcgcgttta taggctcccg ctacaacaat tattttattt acaatttcag gatgacgaat
     4201 tgcaatttgc aacgtggtac ttcctccatt gctaaaaccg atgatcgatg ctttacggat
     4261 gttgagttgt tgcagtaatg ccgcaacatc atccgcgtcc tgctgaaatg tttcaggcgc
     4321 gtcgcggtcg ctggtatgtc cgtgcgcctg caattccacc gcaattattt tgtaacgttt
     4381 cgcaagcatc ggcagtattg ttccaaatgt tgtttgaatt gttgaaccgc caccgtgtat
     4441 cagcacgaga gggttgcctt ctccatgaat ttcataatac atctttattc cattcacgtc
     4501 cgcataattt cctgtactca ttcgtaaccg tttttaaatt ggtttgtaac ctttatcctg
     4561 atttaaaatt ataatattac aaaaatagca aaaccaaaag ccggcgtgtg accgaagaac
     4621 gtgcgaaata tgaatgcaac ttccattctt gcactgcacg cgaaaattca atgcacgtta
     4681 atcaatgcgg caaaatacac aacctcttgg aaagtccctt tatggatcta gggctttatc
     4741 aatctcatcc ggtatgcatt catcgcagtc tcacccagtt tagttatgag ccgatagttt
     4801 acaattatac caacaggcgc tccaattatg ggaatcagtt gagccatctt cgcaatgtcg
     4861 agatagtcgc gatattcctg ctgaaacgtt cgccaatcga atgcatggat atcatccggt
     4921 agaagcttcg cgtgctcttc ccaattcgcc attttcagat atacattcct gcgctcctcc
     4981 tggctcgaga acgcaagctg cataatatat aaaatgtaca cgcgctcttt gtaatcattc
     5041 acattaaaac cataaagcga cccgatgtcg aacaacaatt tgatcttgat acctagcaac
     5101 agcggaaaat cagcgagccc gagcaagatg ccacccgctc ccgttagacc tccttctgct
     5161 gcccccgtgg tcctgtacat tttgatacgt tcacgaataa tggtctcctt tttttcaagg
     5221 ctgctttttt tatcgggctt cgaagtaaat acgcccgcgc caaacaatac aaccctgatc
     5281 atttgcttta tcgtcgcagt gattgcctgg tgcgcttttt caggtatcag gctgttcatt
     5341 tttgtttgca tctttttggc cagcctgttg gtgaatgaag gcttccgcag catcttcttc
     5401 tgccagtgta ttaattcttc tgatatctgt ttactgtaat ttgacattga atttcctgcg
     5461 aagatcaaaa tccaaaaaga tgccagcaaa caactccata aaaattgaaa aatcaatatt
     5521 ttcacggcgc aggatcattc cacctttaaa tcaaaccatt tgtcaaaaaa agatattatc
     5581 atcggcattg ccgcactgct gatgaccgtc tttgccggcg ttgctacgta ttttgaaatt
     5641 aattcaattt ttacttttgc ggtcacagca gttgcattgg tgctgctcgc aatgaatgtg
     5701 ggtcatgcca ccgaacaact tggcaaccga atgggacctg cggttacagg tatccttcaa
     5761 tcggcactcg gaaatttgcc ggaattgttc gtagcaattt ttgcgcttcg tgcgggactc
     5821 gacaaagttg tccaggcagc actggtcggt tcaatacttg gcaactcatt gctcgtcttc
     5881 ggcctggccg tgttgttcgg cggattgaaa aacggaacgc agaagtttaa ttccgaaccg
     5941 ccaaaaatga tggccacgct catgttgctt gcgtttgctg cactggcgat tccttcgctt
     6001 gcatcacgcc tgcatacacc ggcggccgca aacatcaaca agctcgatat aatggtggcg
     6061 atcgtgttgt tgatcgtttt tgtagcgagc cttacatttt caattaaagg cgataaagcg
     6121 gtggtgcctg aagaaagacg ggaaccacat gaagcttcgt ggtccttgcc gataacggtc
     6181 ctggtgcttt tggcagccgg tacgggtgcg gcttttgttt cggattggtt catagaagca
     6241 ctgcaacctg cgatgaagat acttggcatc aatgaagttt ttgcgggatt agtgatcgtg
     6301 gctcttgccg gaaatgcaat tgaaaacctc gtaggcattc agttggcgat taaaaacaaa
     6361 gccgactatg cggtcagcat catgctcaac agctcgctgc aaattgcgct cgggctgttt
     6421 cccttgttgt tgttgctttc ttttttctta ggtggagcga tcctttcatt tgtgttgagc
     6481 cctttattgt tggcggcact agcgcttgcg gtactggtga gtgctttcgt tgtgtttgac
     6541 ggtgaatcta tctggcttga gggtgtagcg ctgatagggc tgtattgcat tatcgccgcg
     6601 gcattctggt ggggataggc aagtttgacg agatctgatt tatgaacgac gaaaaaattc
     6661 ttattggtgg aacgagatta tgaaataact tagcgcggca aaaaaaatgg ccactccgtg
     6721 gaaacggact ggcctctaac gattgcttgc catatgaaaa agttctaaaa ttcttttcgt
     6781 gcttgccccg gcctctttac gattgcccct ctttcgattg cctgcctgtg aaatctttat
     6841 tcaggcgtaa aagtacttgc cagtgttcgc aggaacaaaa caacttatac acagtttgat
     6901 tatgccaaaa atgagaaaac cattgcaaaa cccttactgg cattgggttt gaggagattg
     6961 ctcgctatga cgtccaacag gtttacagac gctttatttc aactcatccg gtcgcttgaa
     7021 aaatcggaaa aaaggcattt caagctgtat ataaggcgaa gttcttcaaa agaagacctg
     7081 aaaataatac agctcttcga cgccctcgac aaaatgcatg actacgatga aaaggccttg
     7141 ttgaaaaaac tggcgccgat aacgaagcct caattgtcca atctgaaagc acacttgtac
     7201 aagcaggtgc ttgcgagttt acgcctcctg aaaacatcag tcaatataga cttgcagttg
     7261 agtgagctcc tggataatgc gcgtgtgtta tataacaagg gacttaagat gcaaagcttc
     7321 aaaatgcttg agcgcgcaaa agagcttgcg aaatcaaatc ataaatacaa tttcctcgcg
     7381 caggttattt cactcgataa aaaaatagaa acgctgcaca ttacgagaag ttcgcttgaa
     7441 aaaaccgaac tgctggccac cgaggctgcg gagatcagtg gccatatcga caaggtaatt
     7501 aagctttcga accttgcttt gcttttatac cgctggtacg ttcaaaacgg gtatgcgcga
     7561 aataaagaag atgaaaaagg cattcgtgct tttttcaaag agaaccttcc tgacaacgcg
     7621 ggcaccatca cggattttta tgaacgcctt tacctatatc aaagctattg ctggtacgcg
     7681 ttcattcgcc aggatttcct gatgtattat cgttacagtc aaaagtggat cgaccttttc
     7741 gacgaagagc ctgaaatgag acgcgttgaa acgggccatt tcgtaaaagg gatgcacacg
     7801 ttgctcaacg cacattttaa cctgcgcaat tttcagcaat tccaggctgt gcttaaaaaa
     7861 ttcgaggcgt tttcaaaaag caccgccgcc aacacaaacg ataatttccg gatccatact
     7921 tttatttaca tacatgctgc aaagatcaac tggcacttaa tgaccggtgg tttcgcggag
     7981 ggactggcgc tgatcccgca tatcgaagcc aatcttgctg aatactccgc atatgttgac
     8041 aggcatcgaa tactggtgtt taactacaag atcgctatga tgtattttgg cagcggcgac
     8101 tacgaacgct gcatcgatta cctgcaacgc atcatcaacg atcatgtgag cctgcgcata
     8161 gacttgcagt gttatgcaag gcttttacat ttgatggcgc attacgaatt gggcaatgac
     8221 agcatcattg aatcgctgat aaaatcggtg taccgtttta tggctaaaat gcaaaacctg
     8281 acggtcgttg aggaagagat attcaaattc atacgcaatt cgttcaaggt ctctccggaa
     8341 ttattaaaac cctcgatgaa ggaatttcta aacaagataa aacacctcga aaaaaaccgt
     8401 tttgaaacgc gcgctttcgc ttatctcgat gttatttcat gggttgaaag caaagtatac
     8461 caaaaaccgc tgagcgaggt gatccacgaa aaatacattg ccagtaaaaa aaggatctac
     8521 cgctgatcac tgcagtacat caagcatttt gatccttata tcaaacacat cattttcccc
     8581 ctccagatca gtttttcttt gttgaatgaa tttcaaatta ttcatcaact taaaattttt
     8641 ttatgagcac ctttttaaaa ttgcaagtgg caaaacgctt tgtgctaagc ctgcttgcgc
     8701 tgacgttgtt atcgtttgcc tcacgcgccg gcggcgaatc ctacgagatc tatctcaaca
     8761 ataaactgat ctgcaaacaa gtgaacggaa aatttctttg cggagataaa ggtttgcagt
     8821 tgacaaaaac aaacatgaac gacaaccttg ttataacata caaccattgc ggccgggttg
     8881 gcaccggcag aacgatcgtt gcaaaagacg aacatgaccg gtcattaaag gagtggaagt
     8941 ttgaagacaa tgcatccatt accatccccg tgaaacagat attgagtctg cagaaaaatt
     9001 cagtagtaaa cctttattac ttctcgacac aatatctgcc gaaaggccgc atgcttacct
     9061 ccatcaacat cgcggaaaag gaaactacac aaaacgatcg cggaaaagac tggttcgttg
     9121 cggcgatgtt catgctggtt tgcttcaggc ttgtgtagcc tttgaaaaac ttaacctgtc
     9181 aggtttttca ataaaaagga ttcgaacaaa aaagtaaacc tgacaggttt ttgcttatcc
     9241 gttcacaaac ggattgtact tcttctcatg tccgataatt gttgattccc cgtgaccggg
     9301 atatacgatc gtttgatccg gcagaacgta taatttttcg cggatacttt taagaagctg
     9361 ttgttcgtta ccgccgggca gatcaaaccg tccaatgctt tcccggaaaa gtacatcacc
     9421 tccgatcaaa aaatgctgtg cctcgcagta aaaacaaata ctcgccggcg aatggccggg
     9481 cgtaagaagg atcgtcaact tatcatcacc tgaccaaatc tcgtcgccct cattcaagta
     9541 atggaccggc cccttataat tcgtgaactg tagcccgtac atattaccag ccgccggtgc
     9601 atattccaac accatttttt cgccggcatg catgtataat tccagctcgt actttttgtg
     9661 cacccactcg ttaccaaaaa cgtgatcaat gtggcaatgt gtattcagca attgcaccgg
     9721 tttcaaaccg tttgaagcaa tgaaatcttc cagtgttttt tcttcggcag taaaataaca
     9781 accggcgtct ataataagcg catcgccttt ttcgttgctc aacacataag tattttcagc
     9841 gaaaggatta aacgtaaaat actctacttt tatcatactg gtttttacaa gtcctttaca
     9901 agttattatg ctaattttaa gattttatga gagatatgca aagtaaaagc ttaaggccgg
     9961 aaatcgtcct cggaataaca ctgctcttct tacccttttt actcgctgct caagtcaaca
    10021 ctgtcgaatt cggcaaaaat cgcgttcaat atgaaaaatt cacctggaag ttttatcaaa
    10081 gccccaattt taatgtgtac ttcaaccagg gcgggcttga gttggctaaa tatattacgc
    10141 aggtagctga agaagaatta gactctatcg aaacggatat cgactactcg ctgcagcgcc
    10201 gcacgaccct tgttctttac gataattacg acgattacaa aagcagcaat ataggactgg
    10261 gaattgactg gcagaatgcg ggcgggctca ccacacttgt gaacaataag atccctcttt
    10321 attttgatgg aaatcacaac acgcttcatt tgaggatcag gcaaggcatc gcaagaattc
    10381 tcactgataa tattctcttt ggtgacgaca ttggcgaatt tgcgagcaac caggccctgc
    10441 ttgatcttcc aaaatggctg acagacggct acgttgatta tatagctcaa cattggagta
    10501 ctgaaaatga tgatgagctc aaaaatgcca tcctcggcgg cgattataat aatttttacc
    10561 agtttgcttt tgataaaccc gttcttgcgg ggcacgcgtt ctggtattat atcgcacgga
    10621 aatataaacc tcaaaacgtt acctattttt tatacctcgc gcgtttgtat aagaatttga
    10681 acacagcctc cgagcgcatt tgcaagaaaa agtttaagga agttttgcag gattttatgg
    10741 ccgaagaaca gacccggtat gtagccgata tcaaacaacg ccgaaatgcg ccgaaaggaa
    10801 aattatccgt agttgaagat ctcaccaaaa gcgatttcta tcacttcaat gcgaacccaa
    10861 atccaaaaaa caattcttat gctgtggtgc aattcaccaa gggaaaatat aaggtgaagt
    10921 attacgataa tgtttttgat gaacacacac tgcttgaatt tggggtacgg acgatctccg
    10981 gagacatgaa tccgaatatg ccgatcctcg cgtgggatgg caagggatca agactccttt
    11041 gcatgtatac gaaagaaggc aagacctaca tgtttgttta tgacgtgata gcgaatatca
    11101 aacgttttaa gcaggaggta atcgggtttg agcaggtgct tgatgccggt tttattttta
    11161 atgcaaatac ccttttgctc agtgcggtaa agaatggcca cacggatatt tttacgtacc
    11221 ggatcgataa cgaggatatt aaacaggtca caaacgacat ctacgacgat cttgatccaa
    11281 cgtttgtttc attccccaac cggctgggaa taatcttcgc ctcaaaccgg ccgggcgtga
    11341 atgcgccaaa ttcagacacc gtattgccta gccgcaatcg cttcaatata tttctcgcag
    11401 atatcaataa caacagtgag tttcggcaga tcactcagct taccaattta aagtatggta
    11461 acgcgcgtta cccgatgcag tacaatcaaa atcatttcac atttgtaagc gacgaaaatg
    11521 gcatcggtaa tcgctgggca ggctttttta ccacgcagcc tggtggaatc gatacgttgt
    11581 attatgtggg cgaggacatc ttgcggaacc ctgacccgaa cgaaatggat tctacgttgc
    11641 gcgcatggca aaaggctcaa ccggacagca taagttattt taaagtgtac caggatagta
    11701 cgtacacgtt tcccataacc aattatcaaa gcagcctgct ggagacacgc gtgtcgggaa
    11761 ataatgacca ggtaagcgaa gtccgaaagg aaggagatta taaatttctg tataagctgc
    11821 gcgtagattc ggcaacactg cgaaaaagga acgtaaatgc gagaccgacg gattatgtgc
    11881 gcagaatgat aacggaggaa cggctcgctg gcggccagtc ggtgcagatc gccccaacgg
    11941 atacggcaca gaataacaat aaccagtttc agaatgaatt tgaagaagag aaaaaagatt
    12001 ctgcaacaaa tgtctccaac gttgcgccgg tagtgccgga gtatacggcg ccacgcccgg
    12061 attatttagc aaagtcgaaa ttgtatgact ataagctgaa gttcgaggcg gattatgtgc
    12121 tcgccggttt cagcaacaat attctcataa ccaggtatca acctttcggc ggatatagtc
    12181 aaaccggacc catctattta aacaatggca atgcggttaa tttcacgttt agagttggtg
    12241 tgagtgatat catggaggat gtaaagttaa ttggcggggt gcggctcgga acatcgctcg
    12301 atgataaaga tgcgtttctt acgtttcaaa actaccgcaa gcgtattgac tggggattga
    12361 cctactaccg aagcaacgtt tcaaactacg atgggtttta tcgcggaata gattacaaca
    12421 ccagcgtcga ctataacctt ttagacaacg ttgtaattac aaacctgtac caggcaaatg
    12481 tttcttatcc ttttaatgaa gtgaacaggc tgtcgcttgt tatgggattg agaaaggaca
    12541 tagggacgct ccgaccggaa tatgcaggcg tggctcttta tcctgacgtg ctgaagcttc
    12601 ctgattccgt ctcatcgaca ataatttcga gacttgaatt tgtgcatgat aacacgatcc
    12661 acccggcaga taatatatgg aatggtttca ggtggaaaat atatacggag ctgtttgtgc
    12721 cggcaaacgc agcgtcggct ttgaagaaca aaaacaccat caatgtaggc atcgatgcgc
    12781 ggcactactt aaagatctac cgaaacttta tttgggccgt aagagcagca gcagattttt
    12841 ctttcggaga tgcaaaactg atctattatc tcggtggaga agacggatgg gtctttccaa
    12901 agtttaacca cctggacgca gacaccaggg tgccgtactc ttttcaaacg ctcgctttaa
    12961 atctgagggg ctttaatcaa aatgcagcaa acgggagtaa caatgctgtc ataaatagcg
    13021 aactaaggct tcccgtgttt actacgttgc tcagtagtcc aataaacaat gcgttccttc
    13081 gcaatttcca actcgttcaa tttatcgatt tggggacggc gtgggccgga ccagtgagcg
    13141 ctatcaagcg gccgaccgtt atttaccatt tggatccacc tccgcctgcg gggcttagtc
    13201 cgctggatgt caaaataaaa gcgggtggaa tcggtccatt tgccggcggc tatgggtttg
    13261 gtgcaaggag cactttgctc ggatattttt tgaaggcaga tatcggctgg cagatgcgcg
    13321 gaatattccg cggtccggca gtattctatt tctgtctcgg atttgatttt taaattttca
    13381 acgaattcaa tttaaaactg ctctgcatta atatgcgggg cagttttttt tgaacttcat
    13441 acaagcgcaa atatttttgg tatgaaaatt atcaggccta tgacgacgct gatgattgat
    13501 gcaacgagga ctgcgcccgc cgaaacatct tttatttttt ttaccaacgg atgaaaatcc
    13561 cgctgcacca ggttacacaa atgttccagt gcgctgttga ccatctctaa accgagcacg
    13621 gcgcaaatac acaaaagcac aacgatccat tcgatggaag ttaaacgaag aacagcactc
    13681 gcgagcagta caatgatcgt aattaagccc tggatcctgc cgttcctttc caatcgaaaa
    13741 aaatctatga tcccgtgaaa ggcatttgcc actgctgcca caaaagattg tgccgggcca
    13801 gcgtttagat cagtttgcat ataaacgatt ttaataaggc ttatcgcggt tgtgatgaaa
    13861 tgttttcagc acaaaaaaga taattgcgag gtaagccaat gcaaagatca cgatgtaaat
    13921 cggtacgtgt acatccctta tgagccgcaa tgacaaaatg gttctcagta tcagttttat
    13981 tctaatcatg gaaattgctt tacgcgatcg ccgggaaggg cgacagttgt ttttgcgtcg
    14041 aatcggctga ctttgttctt gataacaccg cttccaggag aggcagcatt ttattcaatg
    14101 caccggtctt gatgaggaaa ttccaaagtg gttcaaactt tttccatcca cctgcatagg
    14161 tgaaatgttt tatgatgtgt ttgaaattat cgtgcgccat gcttgcacga aaaatgtttg
    14221 gccagctata aaaactgcga taagcgtcgt cataaccttt ctttaattcc cgttcattaa
    14281 gcccggctgt tttataaact acatgacgcg tgtcgtacag atcccagtta cgatgcagga
    14341 tccttccgtc ctcttccatt ttcttaaaca gccttgtgcc gggatacggc gtaagaatgt
    14401 gaaatgtgca ggtggttaaa gcatttttta cagcccattc aacggtgcgc ataaaaacag
    14461 atttatcatc gtcgtcgagc ccaaacacaa agctgccgtt gatcataacg ccaagactgt
    14521 gaagtcgctt gatgccttca ttgtaatcct gcccgacatt ttgttttttg ttgctctgtg
    14581 ccaggttatt accattcaat gtttcaaaac ctacgaacaa actgcgcagt cccgcttcag
    14641 ccgctttttc aacgagcctg ccatgcaata ctgcgttgat ggttgacgcg ccctggaaaa
    14701 cacggttcat tcctttcatg ccttcaaaca atgctgaagc aaatttttga tttcccaaca
    14761 ggtggtcatc gagaaaatac aggtgacgcc cttggagccg ctcgatctcc gcgagtgctg
    14821 cgtcgacttt ctgcgtgtaa aaacttttgc cgccctcaaa gaatgcatcc ttatagcaaa
    14881 agtcgcaatg gtagggacag cctcttgaga cgacgatcga attcggcacc aggtataaat
    14941 gacgtttaat gagatctctt ctaaccggag gaatattttc tattgttcgt tcgattgaag
    15001 aataaacgtg ctgcgcatta cccgacttat attctttcag aaaccgcggc cagcactctt
    15061 caccgggacc gacgaatacc gtgtcggcat gttgcatcgc ttcgtctgga agagatgtaa
    15121 catgaagacc gcctaaacaa acataagcgc cttttttcct gtaatgatcc gcgagcttgt
    15181 aagcacgaaa agcgtttgtg atatacacct ggatcacgac aagctccggc tcatcatcga
    15241 tatacagttc ctccacatgt tcatcctgca aattgatatc gtcattctca tcacaataag
    15301 ccgccagtgt tgcaagacca agcggtggaa acaatgaata tttgatcggc ctccaaaacg
    15361 ggctctttgc ttccgttaaa gccggcagga tcattttaat tttcatgccg cctgttttat
    15421 ggaagctttt ctgaataaat atatctgcac taataaatgc acaagcaaaa ctgcaaggca
    15481 tgcgatccat gcaatagcga ccatgcgcac aagcttgttt tcccgtaatt caacctcttt
    15541 caatgaacgg cccaccgcaa caaatccggt acccgcagca tttacttttt catagaccat
    15601 cgccatccga acaccgttct caggttgcca ggtgatcaca tcttcctggt tattttttgt
    15661 aaaatccaac acgcccgcag gtggttgtgg caattgtccg tttaaaagcc ccgttgatcg
    15721 taatggatta ccctgctcat cgaaggtttc tgcaaacact gcaagacttt gagcgatatc
    15781 aatcgtgtct ttaggaaata aattgttcac cgttttgccg gaattcaacg caatgccaag
    15841 gtctctcgca agctgcagtt gcggatcgtt ggcagcggac cggtgtgctt gctgaactga
    15901 agcatacacg agcaaaatgc cgcatgtaag gatcacggct gcggcgaagt gtgcaataaa
    15961 taatgaggat ttcatattaa tattttttat gttacggtta cagctgaaca agtacaacaa
    16021 tttgccagac cgatatgaac gggccttata ccagactttt ttttgctagc gcggaaccat
    16081 ccgtgattcc agtatttaaa agtactttga aatacaaagt ttgtgatcaa aaaaaaatct
    16141 ttaattcatt ctctttatca tctgctccaa tgcgtcaaga tgaaagcgaa aagctttttc
    16201 accagccttt gttgccgagt aaagcgtgtt tgtttttctg ccgataaaac ctttctgcac
    16261 ttttatgtac ccgctttctt caagcgcttt gatatggctg gccaggtttc cgtcggtcac
    16321 ctggatcaat gctttgaggt cgttgaaatt tatggagtca tttaccatca gcgcactcat
    16381 aatgcccagc cggatccggc tgtcgaagac cttgtttaaa ttttctattg gatttttcat
    16441 cagcacgact caatttcttt catattttga ccacattgca gctccgtaga taatatgcaa
    16501 taccccaaag ccgacggccc agaaatataa cccctgtcct gtaaaaaaga gattaatgat
    16561 gccgagcagt atctcgctat agccaagcca tttcgtttcg gggagcgtaa acttgcttgc
    16621 attcaggaca cctaaaccat aaaatatcaa acaaccgggc gcaatgaaat cgtaaacgcc
    16681 gtttttcaaa agtgccagta agaaaattcc gcccgcgatc attggaacag ccacatgtac
    16741 gagcacccgc tgtgcctgcg cgccccatat cggaacatta gttacccggc ttcgccggta
    16801 agtgaatatg aacgcaaaaa aaacggcggc cataaatgta agcacggcga tctgcaacaa
    16861 accgctgttt aaaagatcac cgcgcaggac gctgtcggca tcggtcttgc tattagctcc
    16921 atcaagagcg cttctttgtt ccaggatgtc tcgcgcgaac caagccccga tcaaagcaca
    16981 gatgcctgct gatatgccgc tgagtccact gagactgatg aaccggctgc tgcgctccat
    17041 catttgcttt atatcgcgga gttcattcga aagtttttcc gtagcattca taaaaagcac
    17101 tttgaaagac aaagtaaatg gatatgtgtc gtttccaaaa atcttttttg agaagtggat
    17161 aagtcgtcga attaaattgt tgttgtccga gtgatgtggt tactcggaga ttgtcgcggg
    17221 tcgaagttcc tgtttaatgt tccggcagag cgagcggagg tcgaagaggt tctctacctg
    17281 gtctattctt ttcgtcgaaa aatagttctc actggtgtgc ggctctcgtt acaaaaaagc
    17341 gccttggaca agattattta ttgcaagact tcactcaatt tcttgtcaag ctcttcatcg
    17401 cgcagacccg ccgcaattat ttttcctgcc ggatcaatga gcacgttgaa aggtatcgct
    17461 tcgaattgat atgtggttac ggcagagctt tcccagtgtt tcaggtcact catctgcggc
    17521 cagtttaagt tatccgcttt tattgcacgc atccaatctc ccttgtccgc atccagtgac
    17581 acgccgagga tttgaaaatt cttatttcga aacttgttgt aagcggcgac tacaacgggg
    17641 ttttgagcgc ggcacggcgc acaccagctt gcccaaaaat caaccagcaa atattttccc
    17701 ctgaaagtgc tgacactcaa attttttcca ttcacgtctt tcattgtaag atccggcgcc
    17761 tgctggttaa gtaatgtata ggaactacct gcagagcctc cgcgtacaga ttgtgtgatg
    17821 gcactcttaa atatcgccag cccattatgc tgaggaaaac gtttagaagc atcctcaaca
    17881 agcgcataca attcgtccgg tgaaacaatg cctttggcct tgtcgagaac gaaacagatg
    17941 cctgccgggt tatttgactt cgcgataaaa ttcctgaaga gctcatctaa cgcatttatt
    18001 tcttttgtgt acttcatctg gagcattttg atgagagctg tgtctttcat cgcttctgcg
    18061 ccaatagtat ccaactggta atatgttgcc gagatcatcg agtctttctg gaagtaatca
    18121 ccgataaagc catacaattg tttggtcgct tccgaaccgc tgacctcagg ctcgtggtag
    18181 ccgttcatgt ccacatccac gtgaatatcc tttgaatcgt tcacgacgat caccgccggg
    18241 ttattcttaa agctgatgag atacaaattt tgttgagtat cggcggagct tagcttatag
    18301 cttccatcag cagcgagctt tactgaatca acagttttca tatcagcagt ttgatacgaa
    18361 agcttctgaa gatagaccgt atcacccggc gcacttttaa atttgcctgt tatcgtaaag
    18421 gcgcctgttt ctttcttatg acacgcagcc accaggataa tccctgtaat aaagtataat
    18481 gcacgtttca tgtgaactat gattgtatca attcaattcc ttttcgagca ttgccgttac
    18541 cgtttgtggg tccgccttgc ccttactgat cttttttact tcaccgacaa ataatcctat
    18601 caaacccttt tttcccttcc tgtattcggc gactttgtcg ggcatcttat tcaacacggt
    18661 cctgatccat tcatcgagtt cgccggcatc agttgtttgg ataagattta aatcttttgc
    18721 catttcaaaa accggcgagt cctcatttcc caaaactgcc ggcaacaatt tggaagaagc
    18781 ggcagaaaaa ctgatatgcc catcttctat caattttatt atttccgcaa gttttctggg
    18841 agacggcttt atatcgctga gagagatcgt ttgttcgttc aataattgct tcaacggccc
    18901 gttgatccag tttgccaccg ctttatagtt cgttgtatgc tcaagcgttg aatcgaagta
    18961 gtctgcgatc tctttttcga ggcagagttg cgcagcatcg tactcactca gattgtattc
    19021 ctgctggtaa cgttgtatta attcatgtgg aagtgccggc attgaagttc ttatcgtgtt
    19081 aacgtagtcc tttgtgagat gcagcggtgg aagatccggc tccggcaaat accggtagtc
    19141 attcgcttct tctttttcac gaatagcaaa cgttgtatcc gtacctgcat caaaactcct
    19201 cgtctgttgc aatacaatgc cgccatcatc cagtatcgct gttattcttt caatttcaaa
    19261 ttcgatcgcc tttcttacat ttcgaatgga gttaaggttc tttatttcaa ctttcgtccc
    19321 caatttttga tctccgttca atcgcaaaga aacgttggcg tcgcaacgca ggctgccctc
    19381 ttccatgttt ccgtcgcaaa tatttatcca gcgcacgagc ttacgcaatt cggtcaaaaa
    19441 tattcctgct tcttccgcag aatgcatgca cggttcagta acgatctcta tcagcggtgt
    19501 acctgcacgg ttataatcga taaaactaaa agcatcatcc atatcgtgga tgcttttccc
    19561 ggcatcttcc tcaaggtgaa tgtgatgaag tatcacatcg tggtctccgg ctgaagtctt
    19621 tattttaagg tttccaccca aacatatcgg tgccgcgtgc tgagaagttt gaaacccttt
    19681 cggcaaatcg ggatagaaat aatgcttgcg ggcgaaataa tttttttctt tgatggtaca
    19741 gccgcacgca attcccattt tcacagcgtg ttcaacggct ttcttgtttg ttttcggaag
    19801 cgttccggga tgcgccagcg ttatcacgct cacattctcg ttcggttctg acccgtaagc
    19861 attcgcatcg ctgctaaaca gtttgctatt ggtcaataaa cgggcatgca cctcgaggcc
    19921 aatgactgct tcatattttt gctcgccctt cataaaaccg caaatatagg cggacataga
    19981 tgtaaaagaa ccttaaaacc ttctgccgga agagtcatag ctttccaaca ttcatgcgac
    20041 ggagcgtatc ctttcttgat gatatacttt aaaatttcta tgatgtaaat agccgtctgt
    20101 gattacctga tcgataaaaa attttgaatt aaatgttctt gaaccattcc gttatgagtg
    20161 cgctttcata tcccttctga agcaggtgat cgcgcagctt tcttttttta atgaaaatat
    20221 ttttttcgct tttcaagagc tggagttttt tttccgcaag tcgtgcgaat gtcctttgat
    20281 acgctgaatt atcaattgca tcaagtgcct tcctgataca atattcactc actcgttttt
    20341 gtttcaatcc aagcctgatc ttttgcttac cccaatgctt tatccggaac ttaccacccg
    20401 caaatgctgt tgcaaatcgt tgttcattta aatagttttc ttcgatgagt tttgcaatca
    20461 gcgtctcaac ttctcttcct ttcagatgaa acgaaaatag tttctccctt acttccgcat
    20521 gacatctttc ctggtaagca caatagtgcg tgactttctg ccagacctgt tgtaacgatt
    20581 cgtccatatg aatgaggtga aattaaccga aaacattttg atcgaattta gtgcacaggc
    20641 ttactttagc gtaaacgagc gagatgaaaa aattcatacc tggatttgta ttcttcttta
    20701 ttgtcctttt agcaaatgcg caggactatg atacctatcc tgtgtatcac ggacaattgg
    20761 gtttgatgta ttctaaaagt gcatcttcct tccggatatg gagcccggtt gccgaggaag
    20821 caaaaatcgt cttttacaaa gatggcgccg gaggcacggt cgtgcaaaca gagagcatga
    20881 agaaagatga tggaggcacc tggtacatca ggataaataa agatcttaaa ggggcctttt
    20941 atacgttctc ggttaaagta aatgatacat ggctgaacga agttcctgac ccatatgcaa
    21001 aagcggtggg cgtgaatggc aaacgggcta tggtcgttga ccttaaagaa acggatccac
    21061 caaactggaa ctcggataag agtccgcctt tttcaaaaaa caattatgca accgatgcag
    21121 tgatctacga gctccatgtt cgtgatgcaa gcattgatga caattcaggc attcaacata
    21181 aaggaaaatt cctcggccta accgaaaccg gtacaaaaaa taacgctcga ctgtcaaccg
    21241 gcctggatca tttaaaagaa ctcggaataa cacacgttca tttattaccg tgtttcgact
    21301 tcagctcgat cgatgaatca aaacctgaca gtgcgcaata taactgggga tatgacccgc
    21361 taaactataa tgtgccggaa ggatcatata gcactaatcc ctatgacgga gttacacgta
    21421 taaaagaatt taaaaagctc gttcaaacat ttcacagtaa cgggttaaga gtggtcatcg
    21481 atgtcgtgta caaccacacc ggcgttacgg cgaattccaa tttcaatcaa ctcgttccag
    21541 gttattatta ccggcacaaa tcggatggca gcttttcaga tgcaaccgcc tgcggaaacg
    21601 aaacagcaag tgagcgtcca atgttcagaa agtttatgct tgaaagcgtt atgtattggg
    21661 taagagaata tcacgttgac ggatttcggt tcgacctgat gggcgtgcat gatattgaaa
    21721 caatgaacct catctctgat tcgctgcaca aaataaaacc ggatattatt ttatatggtg
    21781 aaggctggac ggcgggtgat tgcccattgc cggattcact gcgcgctctg aaacccaatg
    21841 cgtataaatt gcatggcatc gccgtcttca gcgacgacat tcgagatggc atcaagggca
    21901 gtgtatttga tattaatgac cgtggttttg ccagcgggaa agcaggcatg gaagaatcgg
    21961 taaagtttgg aatagttgct tcatgcagtc atccgcaggt ggactaccaa aaagtaaatt
    22021 attcgaaagc ggcctacgcc gccgctccat ggaataccat tacctactgc gaatgtcacg
    22081 acaataacac gctttgggat aaactgagct tatcatatcc gactgcaacg gaagaagcgc
    22141 gtgtccacat gcagcagctc gcactaacaa tagtacttac atcacaaggg attccgtttc
    22201 ttcatgcagg taccgaattt ttgcgtaata aaaaaggagt tgaaaattct ttcaacaaac
    22261 ccgatagtat caacgaaatt gactgggacg ccaaaaccaa gtatcgcagt actaccaatt
    22321 atctgcaata tttgatccgc cttcgtaaag agcatcctgc cttcagaatg accaccgatg
    22381 aagggataaa gaaaaatatc gtttttgatg caaccgcacg ggcaggaacc atcatctata
    22441 cgatcaacgg ctccgctgca ggagataagt ggaaacgaat atggatcgca ttcaacggca
    22501 ccgacaaaga gctcagcatt cctttgccac aaggcagttg gaaaactgct gtcgattcga
    22561 atggcatgca tgaaatgaac cggccagtaa caggacaact gaatttgaaa ggatatagtt
    22621 cggcaatttt atatgaggat tgacttacct ttaacaagtt caaatcgcgt ttgaaaatcg
    22681 tctcgtggta agccgtgttt tgggcattca gccgactctt cgatggtact gatttccggc
    22741 taatggttaa actttggccg tacatctttg tcttttggca gcgagaattc gacaacgcgt
    22801 gtttgtctta acgctaacaa ttgtcacatg accacccgac gtacatttat taagtcaaca
    22861 acattcgctt ctgccgcatt gttggtaaag ccatccgttc tgaatttcaa tcattcctac
    22921 atcggcttgc agttgtatac tgtgcgggac caaatggcaa aagatccaca gggcacatta
    22981 gagcaggtcg caaaaattgg gtttaattca atcgagtgcg ccgggtacgc gaaggagaaa
    23041 ttttacggca tggattcaac acaattttca gcattgctaa aaaacaccgg gctcatcatg
    23101 ccaagcgctc attaccggct aggtctcgaa aaggaaaaag acggaacgga cacgcaggga
    23161 acaattctgc acgactggca gcgggctgta gatgatgctg cagccgttgg cgtaaaatac
    23221 atggtatgcg catggctttc agaaaccgaa cgcggaggaa tagaccatta caaggaaatg
    23281 gcgggacaat ttaatacggc cgcagaaacg tgcaagaagg ccggcatcca attttgctat
    23341 cacaatcacg actttgaatt cgttgaacag aacggccagt tgccatatga cgtgctactc
    23401 gccaacacag ataaagatct cgtaaaatta gaactggatc tttattgggt taccaaagcg
    23461 ggacacgatc ctgtgcagat cttcgagacg catccgcatc gtttcccgct gtggcatgta
    23521 aaggatatgg acagcacacc taaacatgat tttactgagg ttggcaacgg gacaatagat
    23581 tttaaacgca ttttcaagtt ctctggcaaa gcaggtcttc aatacttttt tatcgaacag
    23641 gataaatgtc cgggctcgcc gttcgacagt ataacgaaga gtattacata tttgaagcag
    23701 aatttgatct gatatctttc agcagcttat catcaatccg gattcgcttc gccaagttcc
    23761 ggcaatttct cccattcaaa ataaacattc ttcgccttgc cgtcaggtcg gtccttcgat
    23821 gttcttatcg tccaaacggg ccaataatct aattccgcat ccggcatttc gaagcttaga
    23881 atttctttat agcggtcaac agtgagttca gtagccagcc attccatgct catttcgaaa
    23941 ggcagcatca gaggcattct ccatttattt tctccgtcgt tgtgaatatt gcgcatgatg
    24001 tcattcgccg gccttgtaat taatgtgtat gtccagcgct tgatcatttc tcctgtccca
    24061 gtgtctggca attccgctac cgagtacaat cctgcgatga aaaacatttc atggtttttc
    24121 aatttgatat gatatggcac tttctttttc catcccttaa ttccgcgatg gtcgtaaaaa
    24181 ccggtgactg gaatcaaaca tcgcctgttc cgtatctcgt accaataact tgttttgtct
    24241 tcaagtattc tttcacttct tgcgttcagc atgcccgccc gctgccgtaa ataagcgtgt
    24301 tcatttttaa tgtaatatgg aatgcatccc cactccatca aacggcagtg caacttttga
    24361 tcctgcctgc ttttgtaaat gatcgggtgc tcacgatagt catgaccgat tatgtgtgta
    24421 ccatccagga gcagctgaac gtcttcgtca aagatgagtt ccgggaccca cgttgagagt
    24481 tcacttgctt ttgctgtata agcgacatcg taacacatat gactgtaaaa ttttttttag
    24541 agcctggaaa aatagatcgt gcgcaacagt ctgcaaaaaa atagaataaa tttatagcaa
    24601 ccaacagatg tcatcgctca cattttcgaa gtgaacggat gggtgtttgg acaaagcgcg
    24661 tcaattcgtg cttgaagtgc aggctgcctg atcagacaaa atcggtaaaa caattttttc
    24721 ttaattggcc ggctgcaact atgatttttt ttacttcgaa tattcaggcg gcaactagag
    24781 caaacgatac cggacattga agcgctttta accaattctc tgcggagact taggaaattt
    24841 ccaacccgga gatattgaac ttgatttgtt gtatgtttta taaagctcag attttaaatt
    24901 cgatagatgg caaacggtct taattttgcg aaaaatcatt catgcgtaaa cgttgtaatt
    24961 tatttctcat tagtttgtcc ctgctcgctt gcttcacctt ttcctgtgct aaacatctca
    25021 ataacccgga gccatcagaa cgcctggtat catattcatt gagttcatcg aactatcaac
    25081 ctttttctga tatcacttat ataaatggtg atggtgcgca agcttctgct tcagcagccg
    25141 attcaacgtc ttattggtca acaaccgttg cgacatctat gaatccgttc aatgcgcaca
    25201 tggaagtgaa aggttttaat aatactgcgg atacgctgag gtttacgatt tcaatttact
    25261 taagcggggt actacaggct tcaaaacaag attcagtatt acaattctcg accttcgatt
    25321 ctgaagttgc aacggtaatt cagtagcgcc ggcagagcta ttcatttgtc tcactcctca
    25381 tgcgtagaca gagcacattt gcaagagcgg cgtagaaacc taaaggcaag tgttccggat
    25441 actcccggaa acagcaaacg tttgcaaaaa cttcactctg caaacgtttt cttaagtttt
    25501 gttgtggtgt ggggcgggat cgaaccgccg acacaaggat tttcagtcct ttgctctacc
    25561 gactgagcta ccgcaccata atttttttat tcaatcgaat cgccgatgca accctgcaca
    25621 actaagccat tcaggcggcc atttttagtc cttttcccga tacgatcggg ataccgcact
    25681 aacattttct attcaagtcg aaccgctgag gcaaggctgc ccgaataact cattcaagcc
    25741 gcgattttca gttcttgttc gttttgaacg ggctgcaaat atagaagctt tttgcaaaaa
    25801 gcaggctgcg tttgcgcaac tattttacaa tcgccacgca accgtcctcc aatataggca
    25861 gatgcttaaa acgtaagatc acattcgctg caaccactac atctttctcg caataaacgc
    25921 ggatgcgctc caggtcttta tcctcataat atacatccct cactttgctt ccgtccatat
    25981 cggcctttga agttggtata tcaagcaccg tggcaagcag atcgagtgat atataatttt
    26041 tatagtctcc aaacttccac cactgcaacg tatcaaccat ttctatctcc catggtttag
    26101 cgccatggaa ttgcaaatag taagggaggg actgattatt aataagcaat cggcggcaga
    26161 tatatggcac atcaaactcc ctgatgttat gtcctgcgaa ttgaaacctg ttattgattt
    26221 tgtaaaatgc atcagtgatc ttaatgaatg attgcagtaa tgctttttca tcgtcaccaa
    26281 aaatgctttt aatttttaaa caagtttttt tgtccgcatt ctcgtaaaaa taaccggttg
    26341 aaatacaaat tatttttccg aactccgcaa gaattccagc acgcaataaa tagctgtctt
    26401 cagccgatat gttttctggc atggttttgg aaattttgtc gagccagagc aatttccact
    26461 ctttgggtaa catatcgaac cgattaaaat aaggtactgt ctctatatcc agcaacagta
    26521 ggttgaatat ggatgtagtt gaattcagaa gtattgtttt ggtttcaata tagtaaacaa
    26581 tttcataaaa tataaatcag ttttttgtat gagttacagt aattatcctt catccggcaa
    26641 tgagcccgca tcccagccca gggacaaccg gaaattaatt tacgggatat tgatcgccgc
    26701 gcttgtcggc acatggggct atatcattta tgataaaaac aaaacaaacg aaagaattca
    26761 gcaggttacc acgcagtaca cagccgcaga ttcttcgcgc agtgccgttg aaacggagta
    26821 caacgatgca ttggcgagaa tggattcttt gaccgggtca aacacaaagc tatccggcga
    26881 attagcggcg cgtaagaccg aaatcgatga tcttaaatcg cgcattaaat cagaattagg
    26941 taagaaaaat gcagacctga agaaagcgaa atcaatgatc gctgaattga atggcaagat
    27001 cacggacctt cttgcacagg ttgaccagtt gaaacaggag aatcaaacac ttactgttgc
    27061 caacactgat cttaccgcac agcgcgacac gctgactgtt caaaaggcag cagttgaaca
    27121 aactctcgcc actacaacag cagaaaaaga acacgtggaa gacgtgggct ctacgctgca
    27181 cgcgtcaaac ataaacatcg cggctcttga tatcaaaggc agcggaaaag agaaaacaac
    27241 ttcaaccgca aaaagagctg atgtgtttag aatttctttc gacctcgacg aaaatcgtat
    27301 tgcacccagc ggcagcaaag aactgtttgt ttgcgtaacg ggtcccgacg gtcacccgat
    27361 cacgatccct gcaaacggaa gcggaacttt ccagacacgt gaagaaggcg aaaaggtttt
    27421 cactaacaaa gtagacgtta attatgaaca aggcaagcgt atgccagtaa gcttcgactg
    27481 gaaacctgat aatggtaaat atcaaacagg tagctataag atagagatct atcagaacgg
    27541 ttataaaatt ggtgaaggtg tgaaggaact taagaaaggc ggattattcg gttaattaac
    27601 tccggcatat atttcccatt ggttatttga aaatcccgca cttgttgcgg gatttttatt
    27661 tgcccttaca tttttctatt ttaggagcgt gatagaacga tggctaaatg gaaagacttt
    27721 aatatttatt atttctgctg caattgttag cggtactatc ttttactctt cgtacctcgc
    27781 gaaaaaaatt ggaaacgatg aaaagaaacg agttgagacc tgggtagaag cgcaacgcac
    27841 catcctgaat gcatcagacg aagtaagctt gaatctcgca tcaaagatct cctctgaaaa
    27901 tacggagata ccgatcattg aaacgaatga aagagatagc atcacgaata actatctcaa
    27961 cctcgacagc aacaagatca aacacgacag cacatacctc cccaaaaaac tggcggaatt
    28021 taaaaaacaa catgaaccaa tcatcctcgt ggtgagcgag aagccgtact atgtaaacaa
    28081 atattattac ggcgacagcg tcctgcagcg tgaagttcaa tactatccca ttgtgcagtt
    28141 aataatcgta ggcctatttc ttgtcgtcac gatcatggca cagcggaccg cctatcgcag
    28201 cgaacagaac cagctttggg caggaatggc aaaagaaact gcacatcaat taggcacgcc
    28261 cgtttcaagt ttgaaaggct gggttgaagt attaaaagaa atgccgggta atgaaaaact
    28321 cagcgcggaa attgaaaaag atgtgaacag gcttgaattg ataacagacc ggtttggcaa
    28381 gatcggtagc aacccgcagc tcgagcaaaa aaatttggtc gagcaggtgc acaacatgat
    28441 cgactatata aaaagaagag cagccggaaa agtgaagttc aatttcgaca caggcaacga
    28501 gacgaatatt ccggcaatga tctctccgcc gctgtttgac tgggtgatcg aaaatctctt
    28561 aaagaatgcg ctcgatgcga tcgaaggc
//
LOCUS       DASQJI010000150         4293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_935018,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000150 DASQJI010000000
VERSION     DASQJI010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4293
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935018"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VEV83_04560"
     CDS             <1..781
                     /locus_tag="VEV83_04560"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK44414.1"
                     /translation="NRTASKMEPLVSAGATPCSSVKDLAAACDIIFSIVADDAALNQI
                     TLDEDGIVKNLKEGGIHVSISTILPQTAGKLASEHASKNQQYVAAPVMGRPAAARARK
                     LNFLVSGNAVAVQNVKPFLTYCGAAGIWEFGEQVPAANVAKLCNNYLIVAAIEAMSEA
                     IELAEKSGIDKQQWANMITQTLFSAPVYINYSKLLLEENYLPAGFFLRLGLKDVNLVL
                     EQAKSVEAKMPVAELAKKQFENCMEKGLGEYDWTAVRMALQ"
     gene            complement(817..2937)
                     /locus_tag="VEV83_04565"
     CDS             complement(817..2937)
                     /locus_tag="VEV83_04565"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYK44415.1"
                     /translation="MKISVLTLLSFFIAQNIHSQTMLLSHYQALTAPKAPKKQHLMEQ
                     HGDVRDDEYYWLGTRDSDAVIKYLNDENNYCSQVLKPAEKLQKTLYDEMLGRIKQDDN
                     TVPYLKNGYYYYTRYETGKQYPIFCRKKGSETAPEEILVDANTEAKGHAYCVVTGINV
                     SPNNRYLVYSVDTSGRYLYKAFVKDLETGKLLEENFPSAFGNTVWANDSKTIFYDTKD
                     AVSLRTNKVWRHTLGTPVTGDGLVYEEKDETAYASISKSKSEKYIFIASGYTQTYETQ
                     FIDADHPENKPIVIAPREKNFYYEVEAFGDSFYIKTNYQNAPNFKLVSVAVNNFSREN
                     WKDVIPHRDDVLLQSFDVFKDYLVLNERINGISKVRIIGWHNRADKYITFDEPTYVSS
                     LDYNPQLNTDIVRVNYSSMITPTSVIDYNMRTHEKKIRKVQPVIGYDKEQYTSEYLWA
                     TARDGSKIPVSVMYKKSALKDGNNPCLLYAYGSYGVSSDPYFNSNILSLVDRGFVYAI
                     AHVRGGMEMGFKWYEDGKMMHKINTFTDFIDAAEYLVANKYTNPDKLFANGGSAGGLL
                     MGAIANMRPDLFKGILADVPFVDVITTMSDPSIPLTTGEYSEWGNPSNKEEYFYMKQY
                     SPYDNVAKKDYTNMLITTSYSDSQVQYFEPSKFTAKIRELKTDHNLLLLYCNMHGAHG
                     GSSGRFDKLHDIARKYAFVLGLLE"
     gene            complement(3100..>4293)
                     /locus_tag="VEV83_04570"
     CDS             complement(3100..>4293)
                     /locus_tag="VEV83_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HYK44416.1"
                     /translation="GELSFFKVFSGIIKSGMELENESTNTSEKINQLFLVEGNKRVAV
                     NELAAGDIGATLKLKNTHVNNTLHTRGKNYELKPIEFPPPNITVAVEAVKKGEEEKLS
                     QALHQIREEDPTLIVEFSPELKQILIHCQGDMHLAVAKWKIEHLFRLEVRFVKPRIPY
                     RETIRKEADANYRHKKQSGGAGQFGEVYMRIEPWYEGIPEPHGLNVRGRDTYDLDWGG
                     KLVFYNCIVGGAIDARFLPSILKGVMEKMHNGPLTGSYARDIRVCVYDGKMHAVDSND
                     ISFKIAGLQAFRQAFKDADPQILEPVYKVEVLCPDDLTGAVMGDLQTRRAIVEGIDAE
                     GHFQKVTAKVPLAEMDGYSSSLRSLSQGRAKFRSRFSEYAPVPYELQRKLIDEHSKTE
                     KEEVA"
BASE COUNT         1101 a         1010 c          937 g         1245 t
ORIGIN      
        1 caacaggact gcctcaaaaa tggaaccgct ggtttcagcg ggtgctacgc cgtgcagttc
       61 tgtgaaagat cttgcggccg cttgcgacat cattttttcg atagtcgccg acgatgcggc
      121 cttaaaccag atcaccctgg atgaagacgg catcgtgaag aacttaaaag aaggaggcat
      181 tcatgtttcc atcagtacga tccttccgca gactgccggg aagcttgcct cagagcacgc
      241 ttcaaaaaat cagcaatatg tcgcggcgcc ggtgatgggc agacccgcgg cagccagggc
      301 cagaaaacta aattttcttg tttcaggaaa tgctgttgct gtacaaaacg taaagccttt
      361 tctcacctac tgtggcgctg cgggcatttg ggaatttggt gaacaggtgc ctgcggctaa
      421 cgtggctaag ctctgtaaca attatttgat cgttgctgct attgaagcca tgagcgaggc
      481 tattgagctt gcagaaaaaa gcggcatcga caaacagcaa tgggcgaaca tgatcaccca
      541 aactcttttt agtgcgccgg tgtatattaa ttacagcaaa ttgttgctgg aagaaaatta
      601 tctgcctgcg ggattttttc ttcgccttgg attgaaagat gtgaatcttg ttttggaaca
      661 ggcaaaatca gtcgaagcta aaatgcctgt agctgagctc gccaaaaagc aatttgaaaa
      721 ttgcatggaa aaagggcttg gagaatatga ttggacggcg gttcggatgg cattgcagta
      781 actatatttc taaacaagaa tttttacaaa agagaatcat tcaagcagcc cgagcacaaa
      841 tgcatatttc ctcgcaatat cgtgcagttt gtcaaaccgt cccgatgaac cgccatgcgc
      901 gccatgcata ttgcaataaa ggagcagcag gttgtgatcc gttttcagtt cgcgaatttt
      961 cgcggtgaac ttcgatggtt caaagtattg gacctggctg tcgctgtaac tggtcgtgat
     1021 cagcatattc gtgtaatcct tcttagcaac attgtcgtag ggtgaatatt gtttcatata
     1081 aaaatattct tccttgtttg acgggtttcc ccattcggag tattcgccgg tagtgagcgg
     1141 aatggatgga tcactcatcg ttgtgataac atctacgaaa ggcacgtcgg ccaaaattcc
     1201 tttgaacaag tcaggacgca tgtttgcgat cgcgcccatc aacaatccgc ctgcgctgcc
     1261 gccattcgca aaaagtttat ctgggtttgt gtatttgttg gccaccaggt attcggcggc
     1321 gtcaataaaa tcggtgaacg tgtttatttt atgcatcatc tttccatcct cataccattt
     1381 gaatcccatc tccattccgc cacgaacatg ggcaatagca tagacaaatc cgcgatcgac
     1441 cagcgacaga atatttgagt tgaaataagg atcgcttgat actccgtatg agccgtatgc
     1501 atacaagagg cacggattat tgccgtcctt cagcgcactc ttcttataca tgaccgaaac
     1561 aggaatcttc gaaccgtccc gcgcagtggc ccagagatat tcacttgtat actgttcttt
     1621 gtcgtaacca atcaccggtt gaacctttct tatttttttt tcgtgcgtcc gcatattgta
     1681 atcgatcacc gatgttggcg tgatcatgga cgaatagtta acacgaacaa tgtctgtgtt
     1741 taactgcgga ttgtaatcga gtgaagaaac gtacgtgggc tcatcgaatg taatgtattt
     1801 atctgcgcgg ttgtgccagc caatgatcct cacctttgag atgccattta tgcgctcatt
     1861 caaaacaaga taatctttga aaacatcaaa gctctgcagg agtacatcat cgcgatgtgg
     1921 aattacatct ttccagtttt cccgtgaaaa attatttaca gcaaccgaca ccagtttaaa
     1981 gttcggcgcg ttttgataat ttgttttgat ataaaagctg tcgccaaagg cttcgacttc
     2041 gtaataaaaa tttttttccc tcggcgctat gacgataggt ttattttcag ggtggtctgc
     2101 gtcgataaac tgtgtttcat acgtttgcgt ataaccagat gcgatgaaaa tatatttctc
     2161 cgatttcgat ttagaaatac tcgcataggc cgtttcatct ttctcttcat aaaccagccc
     2221 atcgccggta accggtgttc ccaacgtgtg tcgccatacc ttgttagtac gaaggcttac
     2281 cgcatccttc gtgtcataga aaattgtctt cgaatcatta gcccaaacag tattgccgaa
     2341 ggcgctcggg aaattctctt caagcaattt gccggtttca agatctttga caaaggcctt
     2401 atataaatag cgtccgctcg tgtcgactga gtacaccagg tacctgttgt ttggactcac
     2461 attgatgcca gtaaccacgc agtacgcatg cccttttgcc tcggtgttgg cgtcaactaa
     2521 aatttcctcc ggcgccgttt cgctgccttt cttacggcag aagatcgggt attgctttcc
     2581 ggtttcatag cgggtataat agtaatagcc gtttttcaga tagggaacgg tgttatcatc
     2641 ctgcttgatc ctgccaagca tttcatcata caaagttttt tgcagttttt cggcgggctt
     2701 tagaacctgg ctgcaataat tgttttcgtc gttcagatat tttatgaccg catcgctgtc
     2761 gcgggtgcct aaccaataat attcgtcatc acggacgtcg ccgtgctgct ccattaaatg
     2821 ttgttttttg ggcgctttag gtgcagttaa tgcctggtag tgagaaagca acatggtttg
     2881 cgaatgaata ttttgagcga tgaaaaagga gaggagggtt agaacagaga ttttcataaa
     2941 attacagctt cagaattatt ttagtcataa caatcatcat ggtaaaaata caaacttagc
     3001 ttcttcaccg gtgtctcgcg cagaccaaag caaaaaaagc cgctccataa ggaacggctt
     3061 tcaaaattaa ttaaacgtca aactccgaac gtcaaacttc taagcaactt cttccttctc
     3121 tgttttgcta tgctcatcaa tcagcttgcg ctgcaattca tacggcaccg gtgcatactc
     3181 agaaaacctg ctcctgaatt ttgcgcgccc ctgcgataac gaacgcaaag aagaagagta
     3241 tccatccatt tctgccagcg gcacttttgc cgtcactttt tgaaagtggc cttcggcatc
     3301 tataccttct acgatcgcac gccttgtttg cagatcgccc attacagcgc cggtaagatc
     3361 atccggacat aatacctcaa ccttgtaaac cggttcaagg atctgtgggt ctgcatcttt
     3421 aaatgcctgg cggaacgctt gcaatcccgc tatcttgaat gaaatatcgt tgctgtcaac
     3481 cgcgtgcatt tttccgtcgt acacgcatac ccgtatgtca cgcgcgtaag agccggtaag
     3541 tggaccatta tgcattttct ccataacacc tttcagaata gatggaagaa aacgcgcatc
     3601 gatcgcgcca cctacgatgc aattataaaa tacaagctta ccaccccaat ccaggtcata
     3661 cgtatcgcgg ccacgcacat ttaagccgtg tggctcagga atgccttcat accagggctc
     3721 gatgcgcatg tacacttctc caaactgtcc ggcgccgcca ctttgtttct tgtggcgata
     3781 attcgcatcc gcctctttgc gtatggtttc gcggtaaggt attcggggct ttacaaatct
     3841 tacttcgagt ctgaaaagat gttcgatctt ccacttcgca acagccagat gcatatcgcc
     3901 ctggcaatgg atcaggatct gtttcaactc gggtgaaaat tcaacgatca aggttggatc
     3961 ttcttccctt atctggtgta aagcctgcga caatttttct tcctcgcctt tcttcaccgc
     4021 ttccactgca accgtaatat ttggcggcgg aaattcgatc ggctttaatt cataattctt
     4081 tcccctggtg tgaagcgtat tatttacatg tgtatttttt agttttaatg tagcgccgat
     4141 atcgcctgcc gcaagttcat ttaccgcaac gcgcttattg ccctccacca aaaacaactg
     4201 gtttattttt tctgatgtgt tcgtgctttc attttccagc tccattccgc ttttaatgat
     4261 cccggagaac actttgaaaa aggaaagttc acc
//
LOCUS       DASQJI010000151         1920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_474289,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000151 DASQJI010000000
VERSION     DASQJI010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474289"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1343
                     /locus_tag="VEV83_04575"
     CDS             <1..1343
                     /locus_tag="VEV83_04575"
                     /EC_number="5.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HYK44417.1"
                     /translation="SFAIRDLKCQGGVVCTASHNPKEYNGYKAYWNDGGQLVPPHDKN
                     VIKEVEAIKSVDDVKFSGGESNITIIGKDMDNAYISMVKSLSVYPEVIAKQHDLKIVY
                     TPIHGTGITLVPEVLKQFGFTNVTIVEEQSTPDGNFPTVVYPNPEESEAMSIGLKKAR
                     EMNADILLGTDPDADRVGIAIKNHKDEWVLMNGNQTAVLACAYMIEARKAKGIARPND
                     MVIKTIVTTDMIDAIAEKNGVACYNVLTGFKWIAELIKEKEGKENYIIGGEESFGLMV
                     GDKLRDKDAISAVAFLCEMAAYIKDQGHTLYDKLIELYIEYGFYYEELISITKKGMRG
                     QEEIAEMMQQYRDNPPTHINNCPVLEILDYQTQQGKNLKSGESWKLELPKSNVLQFKL
                     EDGTKISARPSGTEPKIKFYFSVHAHLENKTKFDETLLMLKQRIHDVIADMKLE"
     gene            1416..>1920
                     /locus_tag="VEV83_04580"
     CDS             1416..>1920
                     /locus_tag="VEV83_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008628036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HYK44418.1"
                     /translation="MRKLSMAELNRKTVEEFKQAEKNKIIVLLDNIRSAYNVGSIFRT
                     ADAFLIEAIFICGYTPPPTHRSVHKTALGAVDTVDWMHFPNIEDAIAQLNENGYRVYA
                     IEQAEQSMKLEKFALPEGGKIAVIFGNEVEGVQNSVLKIADGCIEIPQHGMKHSLNVS
                     VAAGIVLW"
BASE COUNT          608 a          365 c          494 g          453 t
ORIGIN      
        1 tgagctttgc cattcgtgat ctgaaatgcc agggcggagt ggtttgtacc gcgtcgcata
       61 atccgaaaga gtacaatggt tacaaggcgt attggaacga cggtgggcag ttggttccac
      121 cgcacgataa gaatgtgatc aaagaagtgg aagcgatcaa aagcgtggat gatgtaaaat
      181 tttccggtgg tgaatccaat attacgatca tcggaaagga tatggataat gcatacatca
      241 gcatggttaa aagcctgagt gtatatccgg aagtgattgc caagcagcac gacctgaaaa
      301 tagtttatac gcccatccat ggaacaggca tcacgctggt gccggaagtg ttgaagcagt
      361 ttggtttcac gaacgttact attgttgaag agcaatcaac gccagacggc aattttccga
      421 cagtggtgta ccctaatcct gaagaaagtg aagcgatgag cattggtctg aaaaaagccc
      481 gcgaaatgaa tgcggatatt ttattaggga cagatcctga cgccgaccgt gttggaatcg
      541 ctataaaaaa tcataaagac gaatgggtcc tgatgaatgg caatcaaaca gccgtacttg
      601 catgcgccta tatgatagag gcaaggaaag ctaaaggaat tgcgcggccg aatgatatgg
      661 tgattaagac gatcgttacc actgatatga tagacgcaat tgcagaaaag aacggcgttg
      721 cgtgttacaa cgtgctcacg ggttttaaat ggatcgcaga actaattaaa gaaaaagaag
      781 gaaaggaaaa ttacatcatc ggcggcgaag aaagtttcgg gcttatggtt ggagataagc
      841 tgcgcgacaa agatgccatt tccgcggttg ctttcttatg cgaaatggcg gcctacataa
      901 aagaccaggg acatactttg tacgataagt tgattgagct gtatattgaa tacggttttt
      961 attacgaaga actcatcagc atcaccaaaa aaggaatgcg cggccaggaa gaaattgctg
     1021 aaatgatgca gcagtaccgc gataatccgc caacacatat caataattgc ccggtgttgg
     1081 agatactgga ttatcaaact caacaaggga aaaatttaaa gagcggcgag agctggaagc
     1141 tcgaactacc gaaaagcaat gtgttgcagt tcaaacttga ggatggcacg aagatctctg
     1201 cgaggccgag tggcacggag ccgaagatca aattttattt cagcgtgcat gcgcatcttg
     1261 aaaacaagac caaatttgac gaaacgctct tgatgttaaa acagcggatc cacgacgtga
     1321 tcgcagacat gaaattggaa tgattgacgc caaatacgtt tacgcgaatt gacgattacc
     1381 ccgcaaatgc cgcggggtaa tttatttttg tgtttatgcg aaagcttagc atggctgaat
     1441 tgaatcgcaa gaccgttgaa gaattcaagc aggcagaaaa aaacaagatc atcgtcttgc
     1501 ttgataacat ccgcagtgca tataatgtgg gcagcatatt caggaccgct gatgcatttt
     1561 tgatcgaagc gatttttatt tgcgggtata ctccgccccc gacacaccgt tccgtgcaca
     1621 aaacagcatt gggagcagtt gacactgttg attggatgca ttttccaaac atcgaagatg
     1681 ctatcgctca gctaaacgaa aacgggtatc gagtgtatgc catagagcaa gcagaacaaa
     1741 gcatgaaact cgaaaaattc gcgctgccgg aaggggggaa aattgcagta atatttggca
     1801 acgaagtgga aggtgttcaa aactccgtgc ttaaaattgc agatggttgt atagagatcc
     1861 cgcaacatgg aatgaagcat tcgttgaatg tgtcggttgc tgcaggtatt gtactatgga
//
LOCUS       DASQJI010000152         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1088347,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000152 DASQJI010000000
VERSION     DASQJI010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088347"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1316)
                     /locus_tag="VEV83_04585"
     CDS             complement(<1..1316)
                     /locus_tag="VEV83_04585"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HYK44419.1"
                     /translation="MPLSNAVVMRCPFTLLMILCSCVNVNARSPNTKDSNIVISAAKD
                     VFEFVYDKPSNSVQVKEQISTDYLCNDYRSTIQVVQFYNDKMQINDVDFSIDGKKPKG
                     ITPVFSYYEIDDYFYSDAHICHFPLPLEKKGSIGSVTFTRTYKDPRYLTNIFFSEYYP
                     VVSKQIVFKIPSWMSIELKEMNFTGYSISKTKDSNGDEDVYTYTAKNIGARITEESCP
                     GPTYIYPHILVVSKEAHPQGNSFTYFKTVADQYAWYRYILKDLSNNETIIKAKADEIV
                     AGKTDDMEKVKAIFYWMQNNIRYIAFEDGIAGFLPDKAEEVLRKKYGDCKGMANLTKQ
                     LLKAEGFDARLCWLGTNHIAYDYSTPSLAVDDHMICALIYKGKTYFLDATENYLGLND
                     YAERIQGRQVLIEDNDKYILTHVPATTYTQNLDSEKRVLTVQGSNLT"
     gene            1692..2405
                     /locus_tag="VEV83_04590"
     CDS             1692..2405
                     /locus_tag="VEV83_04590"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK44420.1"
                     /translation="MEPNIIIRIADSGDAQYAETITQQMEESAKARGTGIAKRSVEYI
                     IDKMKEGKAVIALTEDGCWVGFCYIEEWSHGAFVANSGLIVSPQFRKSGVARQIKRKI
                     FDLSRERYPNSKIFGLTTGLAVMKINSELGYEPVTYSELTNDEQFWSGCKSCVNYDIL
                     MSKERKNCLCTAMLYDPADHYEPTETKEHFEQKSKVYERLLNFKQSRFLQAFRKKDKQ
                     KDGQKQRKSFISLFSIFFS"
     gene            2519..>2707
                     /locus_tag="VEV83_04595"
     CDS             2519..>2707
                     /locus_tag="VEV83_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /protein_id="HYK44421.1"
                     /translation="MSSNQNNDVPFYSHLGDGGVSRIVLGFSGGLDTSFCVKYLTQDK
                     GYEVHSIIVNTGGFSDDEL"
BASE COUNT          776 a          583 c          581 g          767 t
ORIGIN      
        1 gtaaggttgc ttccctgcac cgttaagacc cgcttttctg aatccaggtt ttgcgtataa
       61 gtcgtagccg gaacatgcgt tagaatgtat ttatcgttat cttctatcaa cacctgcctg
      121 ccctgtattc gttctgcata atcattcagg ccaaggtagt tttcagtagc atcaaggaaa
      181 tatgtttttc ccttatagat gagcgcgcag atcatgtggt catcgaccgc cagcgacggt
      241 gttgagtagt cgtaagcgat atgattcgtg ccgagccaac acagcctcgc gtcaaatcct
      301 tcagccttca gcagctgttt tgtgagattg gccatccctt tgcaatcgcc atattttttt
      361 ctcaagactt cctcagcctt gtccggcaga aatcctgcga taccatcttc gaaagctata
      421 taccggatat tgttttgcat ccagtaaaag atcgctttca ctttttccat atcgtccgtt
      481 ttaccggcga cgatctcatc agccttcgct tttatgatcg tctcattgtt cgacagatct
      541 tttaaaatat agcgatacca cgcatactgg tcggcaaccg ttttgaaata agtaaatgaa
      601 ttgccttgcg gatgcgcctc ttttgaaacc actaatatgt gtggatagat atacgttgga
      661 ccgggacaac tttcttccgt aatacgtgca ccaatgttct ttgcagtgta tgtgtaaacg
      721 tcttcgtcgc cgttcgaatc ttttgttttg ctgatcgaat agccggtaaa attcatttcc
      781 ttaagttcaa tactcatcca cgatggaatt ttgaaaacaa tttgctttga gacaacagga
      841 tagtattcgc tgaaaaaaat attggttaag tagcgcggat ctttatatgt ccgggtgaat
      901 gtcaccgatc cgatacttcc cttcttctcc aatggcaaag ggaaatgaca gatgtgcgcg
      961 tctgaataaa agtaatcatc gatctcgtag tatgagaaaa ccggtgtaat gcctttcggc
     1021 ttcttgccgt cgatcgaaaa atcaacgtcg ttgatctgca ttttatcatt gtaaaattga
     1081 actacctgta tcgtgctccg gtaatcgttg cacagatagt cggttgaaat ttgttccttc
     1141 acctggacgc tgttcgaagg cttgtcgtac acaaattcga acacgtcttt agcagcgctg
     1201 atgacaatat tggaatcttt cgtgttcgga gaacgggcat ttacattcac gcagctgcac
     1261 aatatcatga gtaaggtaaa agggcacctc attaccacgg catttgataa aggcaaagta
     1321 ggaatttttc gggaatgatc tcatgacttt atttgcttct tgcggactgc tgttacgaac
     1381 acctgttcgt attatgagaa aatttaacgg cgttgtattt taaacattat tatttttgct
     1441 gcctcaaaca attttggtca cacatatctt gagctaaagt tgaaaacgaa cacaacatac
     1501 aatagcaggc actgtttcca tcacggatgt atgatgggtg ttgttgacct acctaatcct
     1561 ttctgtttcc gaccggctcg acgaccgaga atttaatact ccccccaggc aggcagcaca
     1621 tcgtgctgca cggtatttgc gaaaccatca ttcgcaactc taaatttttt tacaagcaag
     1681 cttagaaaat cgtggaacca aacataatca ttcgtatagc cgatagtggc gacgcccaat
     1741 atgcggaaac tattacgcag caaatggaag agtccgcaaa ggcgcgcgga acaggtattg
     1801 ctaaacgtag cgtagaatac atcatcgaca aaatgaagga aggaaaagcc gttatagcct
     1861 tgacggaaga cggctgctgg gttggttttt gttacattga agaatggagt catggcgctt
     1921 ttgttgctaa cagtggtttg atcgtatcgc cacagttcag aaaaagcggt gtggccaggc
     1981 agataaagag aaaaatattt gacctctcaa gagaacgtta tcccaactcg aaaatatttg
     2041 ggctcaccac cgggctcgcc gtaatgaaga taaacagcga actgggttac gagccggtca
     2101 cctattcaga gttaacgaat gatgaacagt tttggagcgg atgcaaaagc tgtgtcaatt
     2161 acgatatact catgagcaag gagagaaaga attgcttatg cactgcgatg ttgtatgatc
     2221 ctgctgacca ctatgaaccc acggaaacga aagaacattt cgagcaaaaa agcaaagtat
     2281 acgaacggct gctgaatttt aaacaaagcc gtttcctgca agcctttaga aaaaaagata
     2341 agcagaagga cggccaaaag cagcgaaaat cattcatttc actgttctcc atatttttct
     2401 catgaatgtg aatgatgtga attgtcaatt gtgaatggag actgcaccgc aacgattaaa
     2461 acgaaaaaaa tccgcctgca aatcattcac caaaaatgtt ccttcaaaaa atatagaaat
     2521 gtcatcgaat caaaataacg acgttccctt ttactcccat ctaggagatg ggggcgtcag
     2581 ccgcattgtt ctcggttttt ccggtgggct ggatacgtct ttctgcgtaa aatacctaac
     2641 gcaagacaag ggctatgaag tgcacagcat catcgtaaac acaggtggtt tctctgacga
     2701 tgaacta
//
LOCUS       DASQJI010000153         4704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_167382,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000153 DASQJI010000000
VERSION     DASQJI010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4704
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167382"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2100
                     /gene="lon"
                     /locus_tag="VEV83_04600"
     CDS             <1..2100
                     /gene="lon"
                     /locus_tag="VEV83_04600"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HYK44422.1"
                     /translation="VAKIVKLIKMPDGGTTIIIQGKKRFSVGSIVQQEPYYVATITVL
                     ADDELAKDDQFDAHAGSIKDLASQIIQLSPNLPAEAAIILKNIENPSFLVNFVSSNLN
                     SDVSDKQNLLEIDDLKLRAEKLIELLQKELQFAELKNKVTTKTRTEIDKQQREYFLQQ
                     QLKSIKDELGGDVNEREVAEMKKKGEAKKWPQAAKDMFHASIAKLERMHPTTPDYSVV
                     YNHLDLLLDLPWQEYTQDNYDLKHAAKILNADHYGMKKIKERILEYLAVLKLKGDMKS
                     PILCFSGAPGIGKTSLGRSIAHAIGRKYVRVSLGGLHDESEIRGHRKTYIGAMPGRIV
                     QSIRKIKSSNPLIVLDEIDKVGNDFRGDPSSALLEVLDPEQNHTFYDNYLELEYDLSK
                     VLFIATANNIQNIQPALRDRLEIIELSGYAVEEKIEIAQRHLIPKQKEAHGLCNLNFR
                     ISNNVLQKIIENYTRESGVRELDRQLAAIMRYKAKEFTMRNKIGRTISTHEIEKILGR
                     QKYSNEIYKTANIPGVAVGLAWTYVGGDILFIETLLSEGKGELKLTGNLGNVMKESAS
                     TALSYLQGNAKKYGIDGSLFNTRNIHIHVPEGAVPKDGPSAGVTMLASLTSAFTGKRI
                     KPYLAMTGEITLRGQVLPVGGIKEKVLAAKRAGLKEIILCALNEKDVKEIDNSFISGL
                     DFHYVKNLQQMLEIALQ"
     gene            2126..3415
                     /locus_tag="VEV83_04605"
     CDS             2126..3415
                     /locus_tag="VEV83_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK44423.1"
                     /translation="MRLLICSLLVFICTSGTSQRKTDSFLQEILSRSDDSVFQKVLRQ
                     RDTFRVQIIYTQIDRDKKNKPSFKNFYFNVDSLFYFNPASTVKLPLACLALEKLNKMH
                     VAGVNKYTTMQFDSAYPHQEKLYADSTSEIGRPSIAQFIRKAFLVSDNDAYNRLYQFV
                     GQQTINENLHAKGYRDVRITREFMGFTADENRHTNPIRFINKDGRLVYSQPMLYNTDS
                     FDFSHVNKLGRAYYNNHDSLMNEPIDFSRVNNISLEDLQQILQSILFPESVPPKQRFD
                     LTADDYKFLYQYLSQFPSETNYPKYDTADYYDSYVKFFFRNGSHRMPDGVRVFNKVGW
                     AYGFLIDVSYVADFKNNIEFMLSAVVYVNSDGVLNDDKYDYDSVGWPFMYQLGQTIYQ
                     YELGRARKYKPDLGKFGIEYETRDVNDTRPAIKDVDN"
     gene            complement(3440..3853)
                     /locus_tag="VEV83_04610"
     CDS             complement(3440..3853)
                     /locus_tag="VEV83_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44424.1"
                     /translation="MKIVLFIIAIFFTIGARAQVMQGKAQWATISVPQLKCWECEQRL
                     NQYLIREKGPGTDAEIVQWKMDLRNATVKIQFIPDRMTLDYIRTAIANAGFDADTIKA
                     EPDSYKILPIQCRKKEDGGGPFKYCELEPADRPKN"
     gene            complement(4011..4661)
                     /gene="pyrE"
                     /locus_tag="VEV83_04615"
     CDS             complement(4011..4661)
                     /gene="pyrE"
                     /locus_tag="VEV83_04615"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HYK44425.1"
                     /translation="MKNEQIVAEKLLQIGAIKLSPSEPFTWASGWKSPIYCDNRKILS
                     YPYVRDFIKSELCNIIFEQYPEAGLVAGVATAGIAWGAMAADQLKLPFIYVRPKPKEH
                     GLGNQVEGFFEEGQKAVVVEDLISTGKSSLQVIEVLRNSGIEVTGLVSIFNYGFQVAE
                     RAFKEARVEYESLTNYNELIKAAIEKHLITPETEQLLLNWRIDPANWPSVAKFEDT"
BASE COUNT         1396 a         1033 c         1027 g         1248 t
ORIGIN      
        1 gttgcaaaaa ttgtgaagct gataaaaatg cccgacggcg ggactacaat aatcatccag
       61 ggaaaaaaaa gatttagcgt cggcagcatt gttcaacaag aaccatacta tgtagccacg
      121 atcacagttc tcgccgacga cgaattagcg aaagatgatc agtttgacgc gcatgccggc
      181 tcgatcaaag atcttgcttc acagatcatc caactatcgc caaacttacc ggcggaagca
      241 gcgatcatct taaagaacat cgaaaatcct tcgttcctcg taaattttgt gagcagcaat
      301 ctgaacagtg atgtaagcga caaacaaaac ttgcttgaga tcgacgacct gaagcttcgc
      361 gctgagaaat tgatcgagct gcttcaaaaa gaattacagt ttgcagaatt gaagaataag
      421 gtgactacca aaacccgcac tgaaatcgac aaacaacagc gcgaatattt tttacagcag
      481 caattaaaga gcattaaaga tgagctcggc ggcgacgtta atgagcgcga ggtggccgag
      541 atgaaaaaga agggcgaggc aaaaaaatgg ccgcaggcag caaaggacat gtttcacgcc
      601 agcatcgcga aattagagag aatgcatcct accacgccag actattctgt tgtgtacaat
      661 catctcgatc ttttgcttga tctcccgtgg caggaatata cgcaggataa ctacgatctt
      721 aaacacgctg cgaaaattct gaatgcagat cactatggca tgaaaaagat caaggagcgg
      781 atccttgaat acctggcggt tttaaagttg aaaggcgata tgaaaagccc gatactttgt
      841 tttagcggtg ctcccggtat tggcaagaca tctctggggc gaagcattgc gcacgctatt
      901 ggaagaaaat atgtgcgggt aagtttaggt ggtttgcatg acgaaagtga aatacgcggt
      961 catcgtaaaa catatattgg cgcgatgccc ggaaggatcg ttcaaagcat acgaaaaata
     1021 aaatcatcca atccccttat cgtgctcgat gagatcgata aagtaggaaa tgattttcgc
     1081 ggcgatccat catccgcctt gcttgaggtg ttagatcctg agcaaaatca tactttctac
     1141 gacaattatc tggagcttga gtatgatctg agtaaagtgc tgttcatcgc aacggcgaac
     1201 aacattcaaa atattcagcc cgcgttgcgc gaccgcctgg aaataattga gctgagcggt
     1261 tatgcggttg aggaaaagat cgagatcgcc caacgtcacc tcatacctaa acaaaaagaa
     1321 gcgcatggct tatgcaattt gaatttcagg atcagcaaca atgtgcttca aaaaataatc
     1381 gaaaactata cacgtgaaag tggggtccgc gaactcgaca ggcagcttgc tgcgatcatg
     1441 cgatataaag caaaagagtt tacgatgcgc aataagatcg ggcgcactat tagcacacac
     1501 gagatcgaaa aaatattggg ccgccagaaa tacagcaatg agatctacaa aaccgctaat
     1561 attcccggcg ttgctgttgg ccttgcgtgg acgtatgttg gtggcgacat tttgtttatt
     1621 gaaacccttt taagtgaagg aaagggagag ttgaagctga ccggcaatct tggaaatgtg
     1681 atgaaggaaa gcgcgtcaac tgccttaagt tacttgcagg gtaacgcaaa aaaatatggt
     1741 attgatggtt ctttattcaa cacaagaaac attcacatac acgtgccgga aggcgctgtg
     1801 ccaaaagacg gccccagtgc tggtgttacc atgttggcct cattaacttc tgcatttacc
     1861 ggcaaaagaa taaagcctta cctggcaatg accggcgaga tcactcttcg tgggcaagtg
     1921 ttacctgttg ggggcatcaa agaaaaagtg ctggctgcga aacgtgcagg cttaaaagaa
     1981 ataatcttgt gcgcgctaaa tgaaaaagat gttaaggaga tcgataacag ctttatttcg
     2041 ggcctcgatt tccactatgt aaagaatctg caacagatgc ttgaaatagc gctgcagtag
     2101 ttcaggatcc tttctagttt tagacatgcg tttacttata tgctcgttgc ttgttttcat
     2161 ctgtacgtcc ggaacatccc aaagaaaaac ggattcgttt ctgcaagaaa ttttgtcgcg
     2221 cagcgatgat tcagtcttcc aaaaagtttt gcggcaacgt gacacatttc gcgtccagat
     2281 catctacacg cagatcgacc gcgataaaaa gaataagccg tctttcaaaa atttttattt
     2341 taatgttgac tcactcttct attttaatcc ggcttcaacg gtaaagctgc cacttgcgtg
     2401 ccttgccctc gagaaattaa ataagatgca tgttgcgggt gtaaataaat acaccaccat
     2461 gcaattcgac agtgcatatc cgcaccagga aaaactgtac gcagacagca cgtctgaaat
     2521 tggacgacca tcaattgccc agttcataag gaaagctttt ttggtaagcg acaacgatgc
     2581 gtataaccgc ctttatcaat ttgtcggaca gcaaaccatc aacgaaaatc ttcatgcaaa
     2641 aggttaccgc gatgtaagga tcacgagaga gttcatggga tttacggccg atgagaaccg
     2701 gcatacgaac ccaatacgtt ttataaacaa agacgggcgt ttggtatata gtcaacctat
     2761 gttgtacaac accgactcat tcgactttag tcatgtaaac aaactcggaa gagcttacta
     2821 taataatcat gatagtctca tgaatgagcc gatcgatttc agccgtgtaa ataatatttc
     2881 ccttgaagac ctgcaacaga tactgcaatc cattttgttc ccagaatcag tgccgccaaa
     2941 gcaacgattc gatctaactg ccgatgatta taaatttctc tatcagtatt tgtcgcaatt
     3001 tccatctgaa acaaattatc cgaaatatga tacagcggat tactacgaca gttacgtaaa
     3061 attctttttc aggaatggca gccatcgaat gccggatggg gtaagggtct tcaacaaagt
     3121 tggttgggca tacggcttcc tgatcgatgt atcgtacgtg gccgacttta aaaataatat
     3181 cgaattcatg ttatctgctg tcgtgtatgt aaacagcgac ggggttttaa atgatgacaa
     3241 gtacgattat gactccgtcg gctggccttt tatgtatcaa cttggccaaa caatttatca
     3301 gtatgaatta ggccgtgcga ggaaatataa accagacctg ggtaagttcg gaattgaata
     3361 tgaaacacgt gatgtaaacg atacacggcc ggcgatcaaa gacgtggata attgaccgtt
     3421 tattcgagca tgtgcacgct taattctttg gacgatctgc aggttcaagc tcacagtact
     3481 taaatggacc accgccatct tccttttttc tgcactggat cggcaggatc ttatatgaat
     3541 ccggttcagc cttgatggta tcagcatcaa agccagcgtt cgcaatagca gttcttatgt
     3601 agtcgagtgt catgcggtcg gggatgaatt gtatcttgac cgtcgcattc ctgagatcca
     3661 ttttccattg aacgatttca gcatcggtgc ccggtccttt ttcccgaatc aaatattggt
     3721 tcaatctctg ttcacattcc cagcacttca actgtggtac acttatcgtc gcccactgcg
     3781 ccttgccctg catcacctgc gcccgggcac cgatggtaaa aaatattgcg ataataaaaa
     3841 gtacaatttt cataaatcaa gaactctaag taaaagcttt tattgtgttc ttgaaacgca
     3901 tgtgagtacg aatctgaacg tgaaaatttt tcgggaaggt gatttacatt gcgcaacact
     3961 tcaactacag catcattatc tctccgcaat tgaagtgttg tatcgcaatt tcaggtgtct
     4021 tcaaattttg caacggacgg ccaattagct ggatcaattc tccaattcag caataattgt
     4081 tccgtttccg gtgtgatcag gtgcttctct atcgcagctt tgatcaattc attgtaattg
     4141 gtcaacgatt catactcaac cctcgcttct ttaaatgccc gttcagccac ctggaaccca
     4201 tagttaaaaa ttgaaacgag cccggtcact tcaatgccgg aattgcgcaa aacttctatc
     4261 acctgcagac tgcttttgcc agtggatata agatcttcca ctacgactgc tttttgtccc
     4321 tcttcaaaaa atccttccac ctggtttccc aatccgtgtt ctttcggttt tggtcgcaca
     4381 tagataaaag gaagcttaag ttggtcggcg gccatcgctc cccatgctat acctgctgtc
     4441 gcaacgcctg ccaccagtcc tgcctcggga tattgttcga aaatgatgtt gcacagttcg
     4501 cttttgatga aatcgcggac gtacggatat gaaagtattt tacgattatc acaatagatc
     4561 ggactcttcc atccgctcgc ccacgtaaac ggttcagacg gactcaattt tattgccccg
     4621 atctgtaata atttctctgc gacgatttgt tcattcttca tgctgcgaag atattgacta
     4681 ttaaaaaatg cgcgagttca aaac
//
LOCUS       DASQJI010000154         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_935588,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000154 DASQJI010000000
VERSION     DASQJI010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935588"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(711..929)
                     /locus_tag="VEV83_04620"
     CDS             complement(711..929)
                     /locus_tag="VEV83_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44426.1"
                     /translation="MSSAFVKESDEQWLHDVQPTLQALIFYLTRENNGVRVYEKNSFI
                     DPKLGKTVHVMSNGGSYTKDDDGRWYIV"
     gene            complement(1001..>1589)
                     /locus_tag="VEV83_04625"
     CDS             complement(1001..>1589)
                     /locus_tag="VEV83_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44427.1"
                     /translation="PFIKTEILMLARKSSKWLWLLNAAGVIALVFAPLSIAHQIILPI
                     LWFLQVSRWSDIATKEKTHRMHYFTFAAYQPVRRLLVSQIIAGIILAVALAVPLIIRY
                     LVTGDLMHVLEIFTGAVFIVAFAVCLGILSGGNKLFEILFFLMTYSAVNKIPFMDYFG
                     GMHNGLNYAGLMLVIIIFLLAMSFALRSYEIGHAV"
BASE COUNT          477 a          371 c          320 g          421 t
ORIGIN      
        1 ggagcgaaat gacagccctt tttttgcact tacaatccgc gactgggaaa tctcaacgaa
       61 cattggcgcc attctctgtt aataacaaac cgtgaggatt gcgtagagat ttctcctggc
      121 gtcgaaatga cggtgcagag tctaatcgaa acgcacgcac accgtcattt cgaaggagcg
      181 aaatgacagc cctttttttg cacttacatt ccgcgactga gagatctcaa cgaatattag
      241 cgcaattctt tattaataac aaaccgggag cattactttg agatttctcc tggcgtcgaa
      301 atgacgacgc acggttttgc cgaaagcaag cacgtcgtca tttcgaagga gcgaaacgac
      361 accccttttt ttgcacttac attccgcgac tgagaaatct caacgaacat tagcgccatt
      421 ctctgctaat aacaaactgg ccgcatcacg ttgagatttc tcctggcgtc gaaatgacgg
      481 tgcagagttt aatcgaaacg caagcacacc gtcatttcga aggagcaaaa tgacaagccc
      541 tttttttgca cttacattcc gcgactgaga aatgtcaacg aacattagcg ccattctctg
      601 ttaatagcaa accgtgagga ttacgtagag atttctcctg gcgtcgaaat gacgacgcac
      661 agtcttagct cagcgtactc tgtgcgaaaa ctcaggtgat acattaaatt tcatacaatg
      721 taccaccggc catcatcgtc tttcgtatag cttccgccat tgctcattac atgaactgtt
      781 ttaccaagct tcggatcaat aaaactattt ttctcataca cgcgcacacc attgttttct
      841 cgggtgaggt agaaaatgag tgcctgtaaa gttggctgca catcgtggag ccattgctcg
      901 tcgctttctt ttacaaatgc ggaactcata tgatggtttt tgtagagaga tcgaaaaatc
      961 atgcctgttc cacaatacaa gagtgaaacc gcgtttctcg tcacacagca tgcccgatct
     1021 cataacttct cagtgcaaaa ctcattgcta gcaaaaagat tattattaca agcatgagtc
     1081 ccgcatagtt gagaccattg tgcatccccc caaaataatc catgaaggga attttgttca
     1141 cagcactata agtcatcagg aaaaaaagaa tttcaaataa cttgtttcca ccgctcaata
     1201 tgccgaggca tacagcaaag gccacgataa atacagcgcc ggtaaaaatt tctaagacgt
     1261 gcataagatc tccggtgacc aggtagcgaa tgatgagtgg aactgctaat gcaactgcta
     1321 aaatgattcc ggctattatt tgagaaacca acaatcgcct tacaggctga taagcagcga
     1381 aggtgaaata atgcatacgg tgtgtttttt ctttcgttgc tatatcagac cagcgactca
     1441 cctgtaaaaa ccaaagtatc ggtagtataa tttgatgtgc tatcgacaaa ggtgcaaata
     1501 ccaatgcaat cacaccagcg gcattcaata gccaaagcca ttttgaactt ttccgcgcaa
     1561 gcattaatat ttctgtctta atgaatggc
//
LOCUS       DASQJI010000155        13550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_14154,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000155 DASQJI010000000
VERSION     DASQJI010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13550
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14154"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VEV83_04630"
     CDS             complement(<1..362)
                     /locus_tag="VEV83_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HYK44428.1"
                     /translation="MQEAYIVAGYRTAVAKSKRGGFRFYRPDDLAVDVIKGLMASVPQ
                     LKAERVDDVIVGNAVPEAEQGLQVGRIIAARALGFEVPGATVNRYCASGLETIAIATA
                     KIRTGMADCIVAGGTESM"
     gene            550..855
                     /gene="rpsJ"
                     /locus_tag="VEV83_04635"
     CDS             550..855
                     /gene="rpsJ"
                     /locus_tag="VEV83_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HYK44429.1"
                     /translation="MSQRIRIKLQSYDHNLVDKSAEKIVKTVRSTGAVVTGPIPLPTH
                     KRVFTVLRSPHVNKKSREQFQLATHKRLLDIYTSSSRTVDALSKLDLPSGVEVEIKA"
     gene            1223..1840
                     /gene="rplC"
                     /locus_tag="VEV83_04640"
     CDS             1223..1840
                     /gene="rplC"
                     /locus_tag="VEV83_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016275270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HYK44430.1"
                     /translation="MKGIIGKKIGMTSIFSPDGRQTACTIIEAGPCIVTQVKTKDTDG
                     YSSLQLAFGDKNEKHSNKAETNHFSKSSTAPKKFVKEFRDYSIDKNLGETVTVDIFAE
                     GENVDVVGTSKGKGFQGVVRRHGFHGVGGQSHGQHDRSRAPGSIGNSSDASRVFKGVR
                     MAGRMGGDRVKLKGLKVVKIFPDKNYILISGSVPGHNGSIVFIQK"
     gene            1854..2498
                     /gene="rplD"
                     /locus_tag="VEV83_04645"
     CDS             1854..2498
                     /gene="rplD"
                     /locus_tag="VEV83_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013618005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HYK44431.1"
                     /translation="MQVDVLNIKGEKTGRTLELPDDIFGIEPNEHVIYLAVKQYQAAQ
                     RQGTHKVKTRAEVHGASRKLHRQKGTGGSRKGNIRNPLYKGGGTVFGPKPHGYGFKLN
                     KKVKDLARISALSFKAKNSGLVVVEDFEFEAPKTKQVADALKNLQIADKKTLLVVDTF
                     NENVFLSLRNLPRVEKTVLADMNTHDILHADVVVFTENAAKGLIEEAEGEPAEA"
     gene            2524..2823
                     /gene="rplW"
                     /locus_tag="VEV83_04650"
     CDS             2524..2823
                     /gene="rplW"
                     /locus_tag="VEV83_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HYK44432.1"
                     /translation="MQLAEVLIKPIITEKANNQQEKLKRYAFKVSKRANKLEIKKAVE
                     DFYGVSVIDVNTLVVPGKNKTRYTKAGFIKGVRPSYKKALVTLAEGDTIDLYANI"
     gene            2910..3749
                     /gene="rplB"
                     /locus_tag="VEV83_04655"
     CDS             2910..3749
                     /gene="rplB"
                     /locus_tag="VEV83_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HYK44433.1"
                     /translation="MALKKYKPVTAGMRWRIGNAYAELTTDKPEKSLLEPNHNPAGRN
                     VQGRRSMRYLGGGHKRKYRIVDFKRNKKNIEAKVQTIEYDPNRSAFIALVEYSDGEKR
                     YIIAPQGLQVGTTILSGDNIAPEIGNALQLKNMPLGTMVHNIEMQPGQGAKLARSAGS
                     SAQLTSKEEKYAVLKMPSGEVRRILINCYATVGVVSNSDHNLQTMGKAGRNRWRGIRP
                     RNRGVAMNPVDHPMGGGEGKASGGHPRSRTGKYAKGQITRKRNKASNKLILQRKNGKK
                     LAK"
     gene            3781..4047
                     /gene="rpsS"
                     /locus_tag="VEV83_04660"
     CDS             3781..4047
                     /gene="rpsS"
                     /locus_tag="VEV83_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007212071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HYK44434.1"
                     /translation="MGRSIKKGPYVDVKLDKKITNINEGKNKKSVIKTWSRRSTITPD
                     FVGHTFAVHNGNKFIPVYITEFMVGHKLGEFAPTRNFKGHSGNK"
     gene            4125..4466
                     /gene="rplV"
                     /locus_tag="VEV83_04665"
     CDS             4125..4466
                     /gene="rplV"
                     /locus_tag="VEV83_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HYK44435.1"
                     /translation="MEAVAKLKNYPTGPRKMRLLADVIRGMQVEKALGILEHHPQHSA
                     APLAKLLRSAINNWEQKNTDQGAADANLIVKTVFVDGGRVLKRMRPAPQGRGYRVRKR
                     SNHVTIIVDKK"
     gene            4541..5317
                     /gene="rpsC"
                     /locus_tag="VEV83_04670"
     CDS             4541..5317
                     /gene="rpsC"
                     /locus_tag="VEV83_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HYK44436.1"
                     /translation="MGQKANPIGNRLGIIRGWESNWYGNKKDFAKKLIEDNKIRNYLN
                     ARINKGGISKIVIERTLGKLIVTIHTSKPGIIIGKGGNEVDRIKEELKKLTSNEDVQI
                     NILEIRRPELDAAIVADNIARQIENRINYKRAIKMSIASALRMGAEGIKVKVSGRLGG
                     AEIARTEEIKQGRVPLHTFRMDIDYANVFALTVYGKIGIKVWICKGEVLGKRELNPNF
                     IGGKSDVSDRRERRGGGDHRDRDRDRDGRGGGGGQRRDRR"
     gene            5428..5847
                     /gene="rplP"
                     /locus_tag="VEV83_04675"
     CDS             5428..5847
                     /gene="rplP"
                     /locus_tag="VEV83_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HYK44437.1"
                     /translation="MLQPKRSKHRKAQKGRIRSVAKRGTSLSFGTYGLKALDPIWLTN
                     RQIEAARQAMTRAMKREGNVWIRIFPDKPITRKPLEVRMGKGKGNPEFWAAVVEPGRI
                     LFECDGVTEQVAKEAMLLAAQKLPIKTKFIARRDMQS"
     gene            5925..6134
                     /gene="rpmC"
                     /locus_tag="VEV83_04680"
     CDS             5925..6134
                     /gene="rpmC"
                     /locus_tag="VEV83_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HYK44438.1"
                     /translation="MANKIEFNKSLKDLNENDLNARITEDKLRLKKLEFAHAISPLEN
                     PLSIRILRKDIARLKTELKNRTLQA"
     gene            6138..6395
                     /gene="rpsQ"
                     /locus_tag="VEV83_04685"
     CDS             6138..6395
                     /gene="rpsQ"
                     /locus_tag="VEV83_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016660790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HYK44439.1"
                     /translation="MSDRNLRKTRTGVVSSNKMDKTITVAVERKVKHPIYGKFVKKTT
                     RFHAHDEKNECTIGDIVKIMETRPLSKIKRWRLVEIVEKAK"
     gene            6509..6877
                     /gene="rplN"
                     /locus_tag="VEV83_04690"
     CDS             6509..6877
                     /gene="rplN"
                     /locus_tag="VEV83_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HYK44440.1"
                     /translation="MIQQESRLNVADNSGAKEVLCIRVLGNSGQDYAKIGDKIVVTVK
                     DALPSGGIKKGTVSKAVIVRTTHKLRRKDGSYIRFDDNAVVLLNAADEPRGTRIFGPV
                     ARELRDKGYMKIISLAPEVL"
     gene            6981..7343
                     /gene="rplX"
                     /locus_tag="VEV83_04695"
     CDS             6981..7343
                     /gene="rplX"
                     /locus_tag="VEV83_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HYK44441.1"
                     /translation="MSKRFKAKFNIKKGDTVIVISGNSKPLKDDNGKILYKPRKVVKV
                     LPEDSRIIVEGVNVVTHHTKPSARNTKGGIVKREAPIHISNVMLWDAKAGLPTKVKRS
                     REDGKLVRVAKKSGEVIK"
     gene            7343..7906
                     /gene="rplE"
                     /locus_tag="VEV83_04700"
     CDS             7343..7906
                     /gene="rplE"
                     /locus_tag="VEV83_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HYK44442.1"
                     /translation="MSTTKYAPRLAGKYKTDVVPALMKKFGYTSVMQAPKLNKICINR
                     GVNGAVADKKLVDVAVDELSQISGQKAVATFSKKDISNFKLRKGMPIGARVTLRGEKM
                     YEFLDRLISVALPRVRDFKGINDKSFDGRGNYTLGVTEQIIFPEIDIDKVNKITGMDI
                     TFVTSGKNNEEAYELLKELGMPFKNVK"
     gene            8008..8277
                     /gene="rpsN"
                     /locus_tag="VEV83_04705"
     CDS             8008..8277
                     /gene="rpsN"
                     /locus_tag="VEV83_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HYK44443.1"
                     /translation="MAKKSIEARQRKRERMVAQYATRRAALKAAGDYPALDKLPRNAS
                     PVRLKNRCQLTGRPRGYVGYFGISRIMFRDMALAGKIPGVKKASW"
     gene            8372..8770
                     /gene="rpsH"
                     /locus_tag="VEV83_04710"
     CDS             8372..8770
                     /gene="rpsH"
                     /locus_tag="VEV83_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HYK44444.1"
                     /translation="MVTDPIADFLTRVRNAQLAGHRVVDIPASNLKKRITEILYDQGY
                     ILKYKFEDDNKQGVIKIALKYDPQTRQPAIRSLERVSRPGLRQYSKPAEFKRVINGLG
                     IAIVSTSKGVMTDKQAKAQNVGGEVLCYIS"
     gene            8869..9423
                     /gene="rplF"
                     /locus_tag="VEV83_04715"
     CDS             8869..9423
                     /gene="rplF"
                     /locus_tag="VEV83_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008372550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HYK44445.1"
                     /translation="MSRIGKAPVNLPKGVTISVGNDNVITVKGPKGELKQAIDRDIKI
                     EESDGVVQISRPTDQIRHRAMHGLYRALISNMVKGVTDGYKKDLELVGVGFKASNQGN
                     VLDLSLGYSHNIIFEVPKELKVATATEKGQNPKILLEGIDKQLLGQVAAKIRGLRKPE
                     PYKGKGVKYSGEFIRRKAGKAAGK"
     gene            9501..9854
                     /gene="rplR"
                     /locus_tag="VEV83_04720"
     CDS             9501..9854
                     /gene="rplR"
                     /locus_tag="VEV83_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_026114014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HYK44446.1"
                     /translation="MDNKVLRRQKIRYRIRKNVSGISQKPRLSVFRSNTEIYVQLIDD
                     ANGKTLASASSKDKDIVPQKGNKTEKSKLVGAAIARKAADLGITTVVFDRSGYLYHGR
                     VKALADGAREGGLQF"
     gene            9943..10464
                     /gene="rpsE"
                     /locus_tag="VEV83_04725"
     CDS             9943..10464
                     /gene="rpsE"
                     /locus_tag="VEV83_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016196837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HYK44447.1"
                     /translation="MSKITVNKVKPGGDVELKEKVVAVNRVVKTTKGGRTFSFSALVV
                     VGNENGVVGQGLGKAKEVQEAITKGIEDAKKNLVKIPVMHGTIPHDQFAKEGAAKILI
                     KPAAQGTGVIAGGSMRAVLESAGITDVLAKSLGSANPHNVVKATIKALTLLREPIQVS
                     RERNIKLSRVFQG"
     gene            10559..10741
                     /gene="rpmD"
                     /locus_tag="VEV83_04730"
     CDS             10559..10741
                     /gene="rpmD"
                     /locus_tag="VEV83_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HYK44448.1"
                     /translation="MKKIKVTQVKSAIDRSERQKLTLKALGLNKLNASKEIEATPQIL
                     GMIRKVDHLVKVEELA"
     gene            10809..11258
                     /gene="rplO"
                     /locus_tag="VEV83_04735"
     CDS             10809..11258
                     /gene="rplO"
                     /locus_tag="VEV83_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HYK44449.1"
                     /translation="MQLHNLQPAQGSTHKQKRLGRGEASGKGGTSTKGNKGGQSRAGY
                     KRKMSHEGGQMPIQRRLPKRGFKNNNRIEYKIFNVGQVDSLLEKYEFAEFSVENLYSY
                     GLAGKTDKVKILGGGELKTKLVFKVNAVSEKAKSLIEAAGGSIEILK"
     gene            11320..12669
                     /gene="secY"
                     /locus_tag="VEV83_04740"
     CDS             11320..12669
                     /gene="secY"
                     /locus_tag="VEV83_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HYK44450.1"
                     /translation="MKKLIQTLKNIWGIEELRNKIITTLALILVYRIGTHIVLPGIDP
                     NKLETAAATTNKNGLLGLFDTFAGGAFSHASIFALGVMPYISASIFMQLMTILVPQMQ
                     KLQKEGESGRKKINQWTRYLTVGVTALQASAYVSYLKTPSYAVALLPAYQSYFLISTV
                     IILTAGTLFVMWLGEKIQDKGLGNGTSIIIMIGILARFPTAIAQEFSTKQGRGGGGLL
                     IFLIEIAILIAIIMGLIVLIQGVRKIPINYAKQIIGNRQFGGARQFLPVKVNSAGVMP
                     IIFAQAIMFLPTLFSFTNLESAQGIVKIFSDHSNAWYMVIYGVMVIAFTFLYTALIFN
                     PKQMSEDLKRNNGFIPGVKPGQPTADYIGAIMDKVTLPGAIFLAIVGILPGFAQRLNV
                     TQSFSTFFGGTSLLIMVGVILDTLQQIETHLLMRQYDGLMKGGRIQGRQTVTPAASR"
     gene            complement(12762..13130)
                     /locus_tag="VEV83_04745"
     CDS             complement(12762..13130)
                     /locus_tag="VEV83_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44451.1"
                     /translation="MKKTLLLAVCICVLGTVFAQTPQTTPQQAPEQSQQKKTTTTKKQ
                     ASSTTAPSKTQKKQDVSAAKSKLKTDKANHASTATKKEDRKQVTTAKHENKKTAPKTK
                     DKTTTKKTPTQPESTPPTNQ"
     gene            13281..>13550
                     /locus_tag="VEV83_04750"
     CDS             13281..>13550
                     /locus_tag="VEV83_04750"
                     /inference="COORDINATES: protein motif:HMM:NF018949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HYK44452.1"
                     /translation="MIDQHILLATLWLGFSALHSILAATAIKRKIESLLKHNYKFYRI
                     SYSCIAVVTLAIVLWYHFSMQSVMLWSASILQRGIAVGAISFGGLV"
BASE COUNT         4263 a         2673 c         3329 g         3285 t
ORIGIN      
        1 ctcatacttt cggtgccacc agctactatg caatctgcca tgcctgtcct tatcttagca
       61 gtcgcgattg caattgtctc gagcccactt gcgcagtaac ggttcactgt tgcgccaggt
      121 acttcaaacc ccaatgcccg cgccgctata atgcggccca cctgtaagcc ctgctctgcc
      181 tcaggtaccg cgttgccaac gatcacgtca tccacccttt cggcctttaa ttgcgggacc
      241 gatgccatca atccttttat gacatccacc gccaggtcgt cgggcctgta aaatctgaac
      301 ccgcctctct tgcttttggc aacggcggtg cgataaccgg ctactatata agcttcctgc
      361 atgctgaaga atttgtttca aagttcggag tttcattctt tacaagttat tttcgccggc
      421 atcgtcgaaa acaaagggga agaatggaaa gcgaaacatt gaactattcc aaaaaacttt
      481 cctaaaagct tgtcttgtat agatgatacg cttacctttg cgctcccaat aaataattgg
      541 atctcggata tgtctcaaag aatcagaatc aaattgcagt cttacgatca caacctggta
      601 gataaatctg ccgagaagat cgtgaaaact gtacgtagca cgggtgcagt agtaacaggt
      661 ccaattccac tgccaacaca caaaagggtt tttacggttc tgcgttcgcc ccacgtgaac
      721 aaaaaaagcc gtgaacagtt ccagttggct acacacaaac gtttactcga tatctacact
      781 tcttcttcgc ggacggtaga tgctttaagt aaattggatc tgccatcggg cgtcgaagtt
      841 gagataaagg cataatctgc aacccggatt tgggcggatt tatgctgatt gaaacgagcg
      901 ttaagttctt atacatattt catctgtcaa tcctgattca tttcaggaga aaacagctct
      961 gaaactattc tgaaaggttt gggtgattaa taataaaaaa atctacccaa acacagttca
     1021 gacaaacata taaacaagcc cttcgaggtt tgtttactgc cggtacttcc atcgccctct
     1081 gtagctttag cgaaagaggg ttacaaaacc tctcctccgc agaaactacg gagagcaaag
     1141 ggaaaaggtc ggcggcaaac agggattgaa gccagagtca tcaggctgtc ctaataacca
     1201 tgcggggcaa aaaccgcaaa agatgaaagg aattattggt aaaaagattg ggatgaccag
     1261 tatcttcagt cccgatggcc ggcaaacagc ctgcaccatc attgaagctg ggccctgcat
     1321 tgtaacccag gttaagacaa aagacaccga cggttattct tctcttcaat tggctttcgg
     1381 cgataagaat gaaaagcact ccaacaaagc cgaaacgaat cacttctcaa aatccagtac
     1441 agcccctaaa aagttcgtaa aagaatttcg cgattacagt atagataaaa accttggtga
     1501 aacagtcacc gttgacattt ttgctgaagg tgaaaatgtt gatgtggttg gaacatcgaa
     1561 aggtaaaggt ttccagggtg tagtaagacg ccatgggttc cacggtgtcg gcgggcaatc
     1621 gcatggccag cacgatcgtt cgcgtgctcc cggatctatt ggtaattcgt ccgatgcatc
     1681 gcgcgttttt aaaggcgtgc gcatggcagg ccgtatgggc ggtgatcgcg taaaactgaa
     1741 aggcctcaag gttgtgaaaa ttttccctga taaaaattat attcttatca gcggctctgt
     1801 gcccgggcac aacggctcaa ttgtttttat tcagaaataa ttaatcgaaa gaaatgcaag
     1861 tcgacgtttt aaatataaaa ggagaaaaga ccggccggac attggagcta cccgatgaca
     1921 tttttggtat cgagccaaat gagcacgtga tctacctcgc agtgaaacaa taccaggcag
     1981 cacaacggca gggaactcat aaagtaaaga caagagctga ggtgcatggc gccagccgta
     2041 agcttcatcg gcagaagggt accggtggtt caagaaaagg gaatatcaga aacccattat
     2101 ataaaggtgg cggtacggtg ttcggaccga aacctcacgg ctatggattt aagttgaaca
     2161 aaaaggtgaa ggacctcgcg agaatcagtg cattatcatt caaagcaaaa aacagcgggc
     2221 ttgttgttgt tgaagacttc gagtttgagg caccaaaaac gaagcaggtc gcagacgctc
     2281 tgaagaatct ccagatcgca gataaaaaaa cgctgcttgt tgttgatacg ttcaatgaga
     2341 acgtgttcct aagcctgcgg aatttgccga gggtggaaaa gaccgtcctg gcagatatga
     2401 atacgcatga tattcttcat gctgacgtgg ttgtgtttac agaaaacgca gcgaagggcc
     2461 tgatagaaga agcggaagga gaaccagcag aagcgtaatt gaataacatt tcaataaaag
     2521 aaaatgcagt tagcagaagt tttaataaaa ccgatcatca cggaaaaagc aaataaccag
     2581 caggagaaac tgaagcgtta tgcttttaaa gtgagcaaaa gagcaaacaa gcttgagatc
     2641 aaaaaagcgg ttgaggattt ttacggtgta tctgtaatag atgtaaatac gctggttgtt
     2701 cccggtaaga ataaaaccag gtacacaaag gctggtttta taaaaggagt tcggccttct
     2761 tacaaaaaag cgctggtaac attggccgaa ggcgatacga tcgacttgta cgccaacata
     2821 taaattggag attggcgatt gcagattgcg gttcacagca atctggatcc aaaatctgaa
     2881 atcgtaaatc tgaaatctga aatcaaatca tggcactaaa aaaatataaa ccggtaacag
     2941 caggaatgcg ttggagaatt ggcaatgctt atgctgagct tacaacggat aaacctgaaa
     3001 aaagtttgtt ggagccgaac cataatccgg ctggccgcaa tgttcagggg cgtcgttcta
     3061 tgcgttacct gggtggcgga cataaaagaa aatatcgcat cgttgatttt aaacgcaaca
     3121 aaaaaaatat cgaagcgaaa gttcagacca ttgagtatga tccaaaccgt tctgctttta
     3181 tagcgctggt ggaatattca gatggagaaa agagatatat catagcaccg caaggtttac
     3241 aggttggaac aaccattctt tcgggcgaca acattgcacc tgagatcgga aatgcgctgc
     3301 agcttaagaa tatgccgttg ggtacgatgg tgcacaacat agaaatgcaa ccgggccagg
     3361 gcgccaaatt ggcgagaagt gccggatcct cagcgcagct tacatcgaaa gaagaaaagt
     3421 atgcggtatt gaaaatgccg tcaggtgaag tacgcaggat ccttatcaat tgttatgcaa
     3481 ccgttggcgt tgtatcaaac agcgatcaca acctgcagac gatgggtaaa gcgggaagga
     3541 atcgttggag aggcattcgt ccgcgcaacc gtggtgtggc tatgaaccct gtggatcacc
     3601 cgatgggtgg tggggaagga aaagcttcag gtggacatcc gaggagcaga accggcaaat
     3661 acgcaaaagg tcaaataacc aggaaacgga ataaggcaag caacaagctg atccttcaac
     3721 gcaagaatgg taaaaaactg gcgaaataaa ttaatctgaa atcgtaaatc tgaaatatac
     3781 atgggtcgtt cgattaaaaa aggtccttat gttgatgtaa agctggataa aaaaattacc
     3841 aacataaatg aaggcaagaa caagaaatca gtgatcaaaa catggagccg tcgctctacg
     3901 atcacgcctg attttgttgg acacacgttc gcggtacaca atggcaataa gttcatcccg
     3961 gtttatataa ctgaattcat ggtgggtcat aagttgggtg aattcgcgcc gaccaggaat
     4021 tttaaaggac actctggaaa taaatagttt gacgtgtgaa gttcgaagtt tgaggataag
     4081 gacaaacatc gaacatccaa acatcgaaca tcaaacaatt agaaatggaa gcagtagcaa
     4141 aacttaaaaa ttatcctaca ggtccgcgca aaatgcgttt gctcgctgat gtgatacgcg
     4201 gcatgcaggt ggaaaaagcg ctcggaattt tggaacatca tccgcagcac agtgcggcgc
     4261 cgttagctaa attattaaga agcgcgatca ataattggga acaaaagaat actgaccagg
     4321 gcgctgctga tgcgaatttg attgtgaaga cggttttcgt ggatggtggc cgtgttttga
     4381 aacgcatgcg tcctgcccca cagggccgtg gatacagggt ccgcaagcgc agcaatcacg
     4441 taacaattat tgtagacaaa aagtaaaaaa tcaaatatca aatccgaaat atcaacacat
     4501 tggttcttga attttgagat ttggatttta aaaaaataac atgggtcaaa aagcaaatcc
     4561 aattggtaac cggttaggta ttatccgcgg atgggaaagc aactggtatg gcaataaaaa
     4621 agattttgcc aagaagctca tcgaggataa taagatcagg aactacctca atgcgcgcat
     4681 aaataaaggc ggcatttcaa agatcgtgat tgagcgcacg ctggggaaac ttatcgtgac
     4741 gattcacaca tcgaaaccgg gtatcatcat tggaaaaggc ggaaacgaag ttgaccgtat
     4801 caaagaagaa ttgaagaagc tgacgagcaa cgaagatgtc cagatcaata tcctcgagat
     4861 acgccggcct gaactggatg ctgcaatcgt agctgacaat atcgcacggc agatcgaaaa
     4921 tcgtatcaac tacaaaagag cgataaagat gtcgatcgcc tcagcgctca gaatgggcgc
     4981 ggaaggaatt aaggtgaaag taagtggtcg cctgggaggt gctgaaatcg ctcgtacaga
     5041 agagatcaaa caaggccgtg taccgctgca cacattccgc atggacattg attatgcaaa
     5101 tgtttttgct ttgacagtgt acggcaagat aggcatcaaa gtatggatct gtaaaggtga
     5161 ggtacttggt aagagggaac tcaatccaaa ctttatcggt ggcaagagtg atgtgagcga
     5221 tagaagagaa agaagaggtg gtggtgacca cagggacagg gatagagata gagatggccg
     5281 cggcggtggt gggggacaga gaagagatag aagataaaaa cagctacaag ccgcgagcga
     5341 tgagccgcga gccgtgtaat ataattgtgt tgaatcgcta taagcggaga gctcgaagct
     5401 cgaagctgat agctcaaagt ttaaaaaatg ttacagccta aaaggagtaa acacaggaag
     5461 gcgcaaaaag gcaggatccg cagtgttgcg aagagaggaa cttcattgtc atttggtact
     5521 tatggtttga aggcgctgga tccgatctgg ttaacaaacc gccagataga agcagctcgc
     5581 caggcaatga cgcgtgcgat gaaacgtgaa ggaaacgtgt ggatccgcat cttccccgat
     5641 aaaccgatca cgcgcaagcc gcttgaagtg agaatgggta aaggaaaggg aaatccggaa
     5701 ttctgggctg cagtggttga accgggacgt atcttgtttg aatgcgatgg tgtaacggag
     5761 caggtggcta aggaagctat gttattagcc gctcagaagt tgcccatcaa aacaaaattc
     5821 attgcaagaa gagatatgca atcttaatgt ggcaacgtga ggtttgcaaa tgaaatcatc
     5881 attcattttc aaattctcaa attgtaaatt ctcaaattag aaaaatggcc aataaaatag
     5941 aattcaataa aagtctgaaa gatctgaatg agaacgatct gaatgcgcgg atcaccgagg
     6001 acaaattgcg cttaaaaaaa cttgagtttg cgcacgctat ttctcctttg gaaaatcctt
     6061 tgagcatccg cattctccgc aaggacatag cacgtttgaa aacagaattg aaaaacagaa
     6121 cattacaagc ataaaagatg tcagacagaa atttacgtaa aacgcgaacc ggggttgtga
     6181 gcagtaacaa gatggacaaa acaattactg ttgctgtgga aagaaaggta aagcacccga
     6241 tctacggaaa gttcgtgaag aagacgacca ggtttcatgc acacgatgaa aagaacgagt
     6301 gtacaattgg tgacatagta aaaattatgg agacgcgccc cttgagcaaa ataaaaagat
     6361 ggcgtttggt ggaaatagtt gagaaagcga aataggaaaa agctgtgagc cgtgagcgtc
     6421 gagccacgag cgcagacttc agttaaaatc aaaagttatt aattgctaaa agctcgcagc
     6481 tcgcagctaa tagctcaaag cttaaaaaat gattcagcag gaaagccgtc ttaatgtggc
     6541 agataacagt ggcgcaaaag aagttctctg tattcgcgtg ttgggcaaca gcgggcagga
     6601 ttatgcgaag atcggggaca agatcgtggt gactgtgaaa gatgctttgc ccagcggtgg
     6661 gataaaaaaa ggaacagtat cgaaggcggt gatcgttcga actacccaca agttgaggag
     6721 aaaagatggt tcctatatcc gtttcgatga caatgcagtc gtactgctga acgccgctga
     6781 tgaaccgcgc ggcacacgca tattcggacc ggtggccagg gagttacgtg ataaaggtta
     6841 tatgaaaatc atttcgctgg cgccggaagt attgtagaaa agctacgagc cgcgagcgat
     6901 gagctccgag ccgtataaaa tatgaaaatg ctatagcgga aagcccaatg ctcgaagcgt
     6961 atagctcaaa gcttaagtaa atgagcaaga gatttaaagc aaaatttaat atcaaaaaag
     7021 gcgatacggt catcgttatc tccggtaaca gcaaaccgct gaaagatgac aatggaaaga
     7081 tcctttacaa gccgcggaaa gtggtaaagg tcctgccgga agatagccgg atcatagtgg
     7141 aaggagtaaa tgtggtcaca catcatacaa aaccttctgc ccgcaatacc aagggtggca
     7201 ttgtgaaaag agaagcgccc attcatataa gcaatgtaat gctgtgggat gcaaaggccg
     7261 gcctgccaac gaaagttaaa cgcagccgtg aagatgggaa attggtccgc gtcgcaaaaa
     7321 aatcagggga ggtaattaaa taatgagcac gacaaaatac gctccgagat tagcgggaaa
     7381 atataagact gacgttgttc ctgctttaat gaaaaagttc ggttacacaa gcgttatgca
     7441 agcgccgaag cttaataaga tctgcatcaa ccgtggagtg aatggagctg tcgcagacaa
     7501 gaagctcgta gatgtagcag tagatgaatt atcacagatc tccggtcaaa aagccgtagc
     7561 taccttcagc aagaaagata tttcaaattt taagttgcgt aagggcatgc cgatcggcgc
     7621 aagagtgact ctgaggggcg aaaaaatgta tgaatttctc gatcgactga tatctgtggc
     7681 cttaccacgt gttcgcgact tcaagggaat aaatgacaag tcgttcgatg gccgcggtaa
     7741 ctatacatta ggcgtaactg aacagatcat ttttcctgag atcgatattg ataaagtgaa
     7801 taagataaca ggcatggaca tcacattcgt gacatccgga aaaaacaacg aagaggcgta
     7861 cgagctattg aaagagctgg gaatgccttt taaaaatgtg aagtaaaaat cacaagaaac
     7921 aaatcgcaaa aaacaaataa cgattaagca agttccaaag tccaaattgg atcttgagat
     7981 ttggatcttg aaattttaaa aaaaattatg gcaaaaaaat caattgaagc caggcaaaga
     8041 aaaagagaac gtatggtggc gcagtatgcg accaggcgtg ctgcattgaa agccgctggt
     8101 gattatccgg ctctcgataa attaccgagg aatgcatcgc ccgtacgttt gaaaaatcgt
     8161 tgccagctca ccggtcgtcc gaggggatat gttggatact ttggcatatc gaggatcatg
     8221 tttcgcgata tggcactcgc gggcaaaata ccgggagtga aaaaagcaag ctggtaatgc
     8281 ctaccgccct aagggcagaa ggcttacaaa atggaaattt caaaattaaa taataacata
     8341 ctctcccttt agggagttgg agggtaaata aatggtaact gatccaatag cagattttct
     8401 cacgcgcgta cgaaatgccc agttggctgg ccatcgtgta gttgatattc ctgcgtcgaa
     8461 cctgaaaaaa cgtataacgg aaatattgta cgaccagggc tatatattaa aatacaagtt
     8521 tgaagatgac aacaaacaag gcgtgattaa gatcgctttg aaatatgatc ctcaaacgcg
     8581 tcagcctgcg attcgttcgc tggaacgggt cagccgtccg ggtttgcgcc agtattcaaa
     8641 gccggcggaa tttaagaggg tgataaatgg cctaggtatc gctattgtta gcacttcgaa
     8701 aggcgttatg actgataaac aggcgaaggc ccagaatgtc ggtggtgaag tgttgtgtta
     8761 catttcatga ttgtttagat cggctacttt caaaatttga aaatggtttt gaaatggccc
     8821 tgaaattcat tattacattt tcgaatcgat aatttcaaat taagttgtat gtcacgtata
     8881 ggcaaggctc cggtaaatct tccaaagggt gttacgatct ctgtgggaaa cgacaacgtt
     8941 attacggtga aagggccgaa aggagaattg aagcaagcca tcgaccggga tattaaaatt
     9001 gaagagtctg acggcgttgt acagatctca cgtccaacag accagatccg ccaccgcgca
     9061 atgcatggat tgtaccgcgc attgatatca aatatggtga aaggcgtaac cgatggttat
     9121 aaaaaagatc ttgaattggt cggggtaggt ttcaaggctt caaaccaggg aaatgttctt
     9181 gacctttctt tgggttattc gcataacata atttttgaag ttcctaaaga attaaaagtt
     9241 gctacggcaa ctgaaaaagg tcaaaaccca aaaatattat tagaagggat cgacaagcaa
     9301 ttgcttggac aggttgccgc caaaatacgc ggcttacgca agcctgagcc gtacaaagga
     9361 aaaggggtaa aatattcagg cgaatttatc cgccgtaaag ccggtaaagc tgcgggcaaa
     9421 taaggagctg atttgagaat tggacgtggc aaaacatttt caattttcat ccaactcgcg
     9481 gcacaaattt tcaaattaat atggacaata aagttttaag aaggcaaaag atcaggtacc
     9541 gcattcgcaa gaacgttagc ggtatttctc aaaaaccgag gctatcggtc ttcaggagta
     9601 acacagagat ctatgttcag ctgatcgatg acgctaatgg taaaacattg gcatccgcgt
     9661 cctcaaagga taaagacatc gtgccgcaaa aaggtaacaa aaccgaaaaa tcgaagctgg
     9721 taggcgccgc cattgcacgc aaggcagccg atcttggaat tacaacggta gtgttcgaca
     9781 gaagtggtta cttatatcat ggccgtgtta aggcgttggc agacggtgcg agagaagggg
     9841 gattacaatt ttagatttca gattgcacga ttgcagattt gttcagagta aggatcgaca
     9901 aatcgtaatt ggtaaatcgt aattcgtaaa tcataaatac agatgtcaaa aatcacggta
     9961 aataaagtta aaccgggtgg tgatgtagag ctaaaggaaa aagtggtcgc agtaaacaga
    10021 gttgtgaaaa caacaaaggg cggccgcaca ttcagtttct ctgcgttggt agtcgttggt
    10081 aatgaaaatg gcgtagtagg tcagggcttg ggtaaagcaa aggaggtgca ggaagcgatc
    10141 acgaagggca ttgaggatgc aaaaaagaat ttagtaaaga ttcctgtgat gcatggcacg
    10201 atccctcacg accagtttgc aaaggaaggc gctgcaaaaa ttctgatcaa acccgcagca
    10261 caaggtactg gtgtgatcgc gggcggaagt atgcgcgctg ttttggaaag cgcaggcatt
    10321 actgatgtat tagcaaaaag cctcggctct gcaaatccac ataatgtggt taaagcgacc
    10381 attaaggctt tgactttgtt aagagaaccg atccaggttt caagggaacg caacataaaa
    10441 ttgagcaggg ttttccaggg ataaaagctc agcttctctc ctgtcgggca gcattctgcg
    10501 aaagcaaatg cgcggtggga tcacaaattc aaattcaatt ctcttagaat tagggcagat
    10561 gaaaaagatt aaagtaacac aggtaaaaag tgcgatcgac aggtcggagc ggcaaaaact
    10621 gactttaaaa gcacttggtc tgaataaatt aaatgcttca aaagaaattg aagcaactcc
    10681 tcagatctta ggcatgatcc ggaaagtgga tcatctggtg aaagtagagg aattagcata
    10741 acgattgctt gccaacattg attaagcgag ctctgcgatt gcggagcgtt aagtaaaaaa
    10801 tcaaaaaaat gcaacttcac aacttacagc ctgcacaagg ttcaactcac aaacaaaaac
    10861 gtttaggccg gggcgaggcc agtggtaagg gcggcacctc gacaaaagga aataaaggcg
    10921 gacaaagccg cgctggttac aaacgaaaaa tgtcgcacga aggaggccag atgccgatcc
    10981 agcgtcgttt gcctaaacgc ggattcaaga acaataaccg cattgagtac aaaattttca
    11041 atgtcggcca ggtcgattcc ttacttgaga aatatgaatt cgctgagttc agcgtcgaaa
    11101 atttatacag ctacggcctc gctggaaaaa cagacaaagt aaaaatttta ggcggtggcg
    11161 aattgaagac taaacttgtt ttcaaggtaa atgccgtgag tgaaaaagct aaatcgctta
    11221 tagaagcggc cggcggaagc atcgagatat taaaatgatt ttgccgatat ttgctgactg
    11281 catctgaacc ggtgcgtttc gtttctaaaa atttttccag tgaaaaaact cattcaaaca
    11341 ttaaagaaca tctggggcat tgaggagctg aggaataaga taatcactac actggcactc
    11401 attctcgttt atcgcatagg tacccatatt gttttacccg gcatcgatcc aaacaaactc
    11461 gaaaccgctg cagcgactac taacaaaaat ggtttgcttg gcctcttcga tacattcgct
    11521 ggcggtgcat tctcgcatgc gtccattttt gcgcttggcg taatgcctta tatctcggca
    11581 tcgatcttta tgcagttgat gacgatactt gttccgcaaa tgcaaaagtt gcagaaagaa
    11641 ggcgagagcg gaagaaaaaa gatcaaccaa tggacacgct atttaactgt tggggttacg
    11701 gctttgcagg caagtgcata tgtgtcgtat ttgaaaactc cttcgtatgc ggtcgcgttg
    11761 ttaccagcat atcaaagtta cttcctcatt tcaactgtta tcattcttac cgccggcacg
    11821 ttgttcgtga tgtggcttgg cgaaaaaata caggataaag gtttgggcaa cggaacgtcg
    11881 atcattatca tgatcggcat attagcccgg ttccctacag ctattgcaca ggaattttct
    11941 accaaacagg gacgaggcgg tggcggattg ctgatcttct taattgaaat agcaattctc
    12001 attgcgatca ttatgggatt gatcgtgctg atacagggcg ttcgaaagat ccctatcaat
    12061 tatgcaaaac aaattatcgg gaacaggcaa ttcggaggtg cgagacaatt tctgccggtg
    12121 aaagtaaaca gcgccggtgt gatgcctatc atctttgcgc aagcgatcat gttcctgccc
    12181 acattatttt ccttcactaa cctggaatct gcgcagggta tcgtaaaaat attttcagac
    12241 cacagtaatg cgtggtatat ggtgatttat ggcgtgatgg tgatcgcgtt cacattcctg
    12301 tacaccgcgc tcatctttaa cccgaagcaa atgagtgaag atctgaagcg gaataatggc
    12361 tttatacccg gggtaaaacc gggtcagccg acggccgatt atattggtgc aatcatggat
    12421 aaagtgacgt tgccgggcgc gatcttcctt gcaattgttg ggatacttcc cggttttgca
    12481 caacggctca atgttacaca gagtttcagt acatttttcg gcggcacttc attgttgatc
    12541 atggtcgggg taattctcga cacgctgcag caaatagaaa cacatctttt gatgcgtcaa
    12601 tatgatggtt tgatgaaggg tgggcgaatc cagggaagac aaacagttac accggcagca
    12661 agccgataaa gagataaaat attttcaata gagaagcctg ttgaagccaa cgggcttttt
    12721 tatttcggcg aaaacagaaa agtcccgttg gcattgaaga attactggtt tgttggcgga
    12781 gtgctttcag gttgtgtcgg cgtcttttta gtcgtcgttt tgtcctttgt ctttggcgct
    12841 gttttcttgt tttcatgctt tgccgtcgtc acctgtttgc gatcctcttt ctttgtcgca
    12901 gtggaagcat gatttgcttt gtctgtcttc aactttgact ttgctgcgct aacgtcctgt
    12961 tttttctgtg ttttactagg cgccgttgtg ctgcttgcct gctttttagt ggtggtcgtc
    13021 ttcttttgct gagactgttc aggagcctgc tgtggagttg tttgcggagt ctgagcgaag
    13081 accgtaccga gtacgcaaat gcatactgcc aacaaaagtg tctttttcat attaaaaaat
    13141 tttgctagcc aagacgcatt ttcaaaaatg cggtttaaaa tgcatcgctc acttttttca
    13201 ttttttaaca gaacggcctt taaaccttac ttttttttaa aattgcacgc ataaatctta
    13261 aatggtaaat tggctgtcgc atgatcgatc agcatatact cctggcaacc ctttggctgg
    13321 gcttttctgc gttacatagc atactggctg ctactgctat aaaacgaaaa atagaatcgc
    13381 ttctcaagca taactataaa ttctaccgaa tctcatattc gtgcattgca gttgttacgc
    13441 tggcgatcgt cttgtggtat catttctcga tgcaaagtgt gatgctttgg agcgcaagta
    13501 tacttcaaag gggcatcgct gtcggcgcaa tttcctttgg cggcctggtg
//
LOCUS       DASQJI010000156         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2778661,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000156 DASQJI010000000
VERSION     DASQJI010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2778661"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..550
                     /locus_tag="VEV83_04755"
     CDS             164..550
                     /locus_tag="VEV83_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK44453.1"
                     /translation="MSTKTQTSIEPWLSVRSTAKAVAFYKTAFAAVETYRLEDPDGNA
                     VVKLSIDGAGFWLSDSPSTNDRQVLGGDTIRMILTVAEPDVVFSGALKAGATEVFPVS
                     EEHGWRIGRLIDPFGLHWEIGKQLNV"
     gene            882..>2132
                     /locus_tag="VEV83_04760"
     CDS             882..>2132
                     /locus_tag="VEV83_04760"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44454.1"
                     /translation="MSKPLSFFNLVFVFVYQISLAQNTPELINSGELIAQGAKLNDDG
                     KYKEAIQLYSKISRSDTNYSAALHELAFSCYVDSQIEASLNYARTGLKLFPEKSAEWY
                     TLMGNAYDQGHQRNEAIRCYDSALKLRPYNYLTWFNKGIACYNINQYDEAKACLQRAV
                     LINPYHSSSHYFLGAICVAQGKIVPAMLSFTTCLLANPGSRYMNSATKYLSQLSKMTD
                     DITAKISNSVHTEGDNFELQQEIIVSEVALDKNYKLQTGIDDPITRQLQVLFEKLQFD
                     AGDKGFWMQFYVPFYTNLFKKGQFDPFVNYIFSGLDIKAVKDYNRKNSKEVESFTSDA
                     VDYLNAIRRTEAVNYADRTPENYKYYYGSDNLLGIGKWTERGEDDDFYGPWEFFYDNG
                     QLKSKGNFNNNGEREGEWVYYYANG"
BASE COUNT          621 a          471 c          518 g          522 t
ORIGIN      
        1 aacgcagaat gcagaaggaa agaaggcaga attcacagga atcactattg caaaatttaa
       61 agacggcaaa ctggtggaag gctggaacgg ttatgacttt ctttccatgt atcaacagtt
      121 gggatttaaa ctcgccgctg aatgatcact caaatctttt tcaatgtcga caaagaccca
      181 aacttccatc gagccctggc tgtctgttcg gagcacggca aaggcagttg cattctataa
      241 aacagcgttt gccgcagtgg aaacctaccg cctcgaagat cccgacggca atgctgtggt
      301 caaactttcg atcgacggcg ccggattttg gctgagtgat tctccgtcca caaacgaccg
      361 ccaggtactg ggcggcgata cgattcgcat gatcttaacc gtcgcagaac cggatgtggt
      421 tttttccggt gctttaaaag ccggcgcaac tgaagtgttc cctgtatcgg aggaacatgg
      481 ttggcgtatt ggccggttga tcgatccgtt tggacttcac tgggagatcg gcaagcagct
      541 caatgtatga cgtgtctcgt gcgattaaca attaaacgcg acgcctgacg gatggttcac
      601 atcatacttt gtgaaacttt gtgcctcgga ctctccgtgt gtccgaattt tgaaccacga
      661 agtcgcgaag gcacgacgac ccaccaggaa aaaatgagct ggcacctgag gaatcctagc
      721 acaatacgtt aatccacagt aaaccactga tcgcagtttt tcaattctga gtaacaatta
      781 ataaacacgg caagccgtta tatagcggcg cgcaaataag ttaaccgatt ttttttatct
      841 tgcaggcccg ttccctacag ccaaaattga cttgacgctt tatgagtaaa ccactttcgt
      901 ttttcaacct tgtctttgtt ttcgtctacc aaataagctt agcgcagaac acgccggagc
      961 ttatcaacag cggtgagctg atcgcccagg gagcaaagtt gaacgacgac gggaaataca
     1021 aggaagcaat ccaattgtac agcaagatct cccgcagcga tacgaattac agtgcggcgc
     1081 tccatgaact ggcgttttca tgttacgtcg atagccagat cgaggcaagc ttgaattatg
     1141 cgcgcaccgg tttgaagctg tttccggaga agtcggccga atggtacacg ctgatgggca
     1201 atgcatacga ccagggacac cagcggaatg aagcaatcag gtgctacgac agcgcactta
     1261 aattgaggcc atataattat ttaacgtggt tcaataaggg cattgcctgt tataatataa
     1321 atcaatacga cgaggcgaaa gcttgtttac aaagagcagt gctcatcaat ccttatcact
     1381 cttcctctca ttattttctt ggggcgatat gcgtggcaca gggcaaaatt gttcctgcca
     1441 tgctgagttt caccacatgc ttgcttgcga accctggaag ccggtatatg aacagcgcaa
     1501 cgaaatattt gagccagttg tcgaagatga ccgacgatat cacggccaag atttcaaatt
     1561 ccgtgcatac tgaaggagac aattttgaat tgcagcagga aataatcgtc agcgaagtag
     1621 cgttagacaa aaactacaaa ttgcaaacag gtattgacga tccgatcaca aggcagctac
     1681 aggtgttgtt tgaaaaactt cagtttgatg ccggggacaa gggcttttgg atgcagtttt
     1741 atgtgccttt ttatacaaat ctttttaaaa agggacagtt cgatccattc gttaattaca
     1801 tattcagcgg gctcgacatc aaagcggtga aagactataa caggaaaaac agcaaggaag
     1861 tggaaagttt tacgtcggac gcagtggatt acctgaatgc gatccgccga accgaggctg
     1921 taaactatgc agaccggacc cccgaaaatt ataagtacta ctacggttca gacaatttac
     1981 ttggcatagg caaatggaca gagagaggtg aggacgatga tttttacggc ccgtgggagt
     2041 tcttttatga caacgggcaa ctaaaatcga aaggcaactt caacaataat ggcgaaagag
     2101 aaggtgaatg ggtttattac tacgcgaatg ga
//
LOCUS       DASQJI010000157         2582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_628342,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000157 DASQJI010000000
VERSION     DASQJI010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628342"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VEV83_04765"
     CDS             complement(<1..635)
                     /locus_tag="VEV83_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016110865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIM24 family protein"
                     /protein_id="HYK44455.1"
                     /translation="MRNHEIDYKIFGEELQYVEIELDPGETAVAEPGAFMMMDDGISM
                     QTIFGDGSQQRDNSLVGQLFSAGKRLLVGENLFMTAFTNTASGKKHISFAAPYTGKVV
                     ALNLLQLGGRVIAQKDAFLCAAKGVSIGIEFQRKLGTGLFGGEGFIMEKIEGDGMAFL
                     HAGGFVQEKDLQQGELLKIDTGCIVGFTGTVDYDIQFVGGIKNTIFGGEGL"
     gene            1192..1608
                     /locus_tag="VEV83_04770"
     CDS             1192..1608
                     /locus_tag="VEV83_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44456.1"
                     /translation="MENNLPDSFLTKVKQFDNAVFYCINSSSQRQAVGIVRNVSLIGE
                     NTLEFSLSHFPVLENSWNVFAAELHFYKKGLPFSMDVHGTAWFISPNELTVQFNVLQT
                     DYFWRVDMKHYSLHETLADFFSSTGLFFKKMLVTGF"
     gene            complement(1605..2039)
                     /locus_tag="VEV83_04775"
     CDS             complement(1605..2039)
                     /locus_tag="VEV83_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44457.1"
                     /translation="MKTFLLLMSIAVAVCGFSQKITITVSAQGKSVSASPDDENNDKV
                     LVLQRSAAAAAAHLVAKVNKEEISAGWKRTFVVYDNEDKEIITLDSMKTNCYGVPLQA
                     LLPVLQQPKQYALYTIVLPEDPQKAMEVRIARQLVCKIQVTD"
     gene            complement(2121..>2582)
                     /locus_tag="VEV83_04780"
     CDS             complement(2121..>2582)
                     /locus_tag="VEV83_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HYK44458.1"
                     /translation="AMFNPGSHANHWKDGLADYDNADIGEMFVSHTMIDKNQNVPFMD
                     GPTVFKKAVIKFPEVIMEALDTNGYKPSDLTMLIPHQANLRISQFVQQKLKLRDDQVY
                     NNIQKYGNTTAASVPLALCEAWQEGKIKRGDLVCLAAFGSGFTWASALLKW"
BASE COUNT          719 a          620 c          507 g          736 t
ORIGIN      
        1 aacaaccctt ctcctccgaa aattgtgttc ttgatcccac cgacaaattg aatgtcatag
       61 tccacagttc ctgtaaatcc aacaatgcaa ccagtatcga tcttgagcaa ttcgccttgc
      121 tgcaggtcct tttcctgcac aaatccgccg gcatgcagaa atgccatgcc gtcgccttcg
      181 atcttctcca taataaaacc ttcaccacca aacaaaccgg ttccaagttt tctttgaaac
      241 tcaatgccaa tacttacacc tttcgccgca cataaaaacg catctttttg tgcgatcacc
      301 ctgcccccta attgtaaaag attcaatgcc accacctttc cggtataagg cgcagcgaaa
      361 ctgatatgtt ttttgccgct ggcagtattt gtaaatgcgg tcatgaagag gttttcacct
      421 accagcaagc gttttcccgc gctgaaaagc tgacccacaa ggctgttatc acgctgctgg
      481 cttccatcgc caaaaatcgt ctgcatcgaa ataccgtcat ccatcatcat aaatgcaccc
      541 ggctctgcaa cagcggtttc tcccggatca agttcgatct ctacgtattg aagctcttca
      601 ccgaagatct tatagtcaat ttcgtggttg cgtatcatac atttttattt acacaacgaa
      661 agtatataat cataaaataa catggggcgc ggttgcacga cttcaattga atttacattt
      721 gtccgatgcg cgacaaaaca ggatgggcga tcaatgagta aaaaattgcc cagacccggc
      781 cagctataaa tagcggttca aaagttcgca gcttgtgtcg ataaagtgcc cgatgctttt
      841 gaatttatag atcagccgca gcttatagtc aaaatgcaag aagataaggc acgacggctc
      901 agaagctgtg gcgctcttac agacattgac acaacacctg gtaaccgaaa aggatgccct
      961 atcttacggc acgtttccaa ccgcaacaaa gaaccgcctc atagcattcc ggagcggtag
     1021 atttttaagc cgttcatgaa gaattttggg gcggcataat ctttggtctt taactgttac
     1081 cattcctatg gacatcacga caaatcaata atttaagaac aaaaaaaacg catgtataag
     1141 atgcagcgta tcacaagaag tttatatctt taaaagtaaa tagcaaccat catggaaaat
     1201 aatctacccg atagttttct aaccaaagtt aaacagttcg ataacgccgt cttctactgc
     1261 atcaactcat cttcacaacg acaagctgtt gggatcgtta ggaatgtatc gctaattggt
     1321 gaaaacacac ttgaattttc actctcacat ttccctgttc tggaaaatag ctggaatgtg
     1381 ttcgcagctg aactgcattt ttataagaaa ggcctaccgt ttagcatgga cgtgcacggt
     1441 accgcgtggt ttattagtcc aaatgaactg actgtacaat tcaatgttct gcagacagac
     1501 tatttctggc gtgtggacat gaagcattat tccttacacg agactcttgc tgacttcttc
     1561 agtagtacag ggttgttttt caaaaagatg ttggttacag ggttttaatc ggtcacctgt
     1621 attttgcaga caagttgtct tgcaattctt acctccattg ctttttgcgg atcttcaggt
     1681 aatacgatag tatagagcgc gtattgtttg ggctgctgca gcactggtag cagcgcttgt
     1741 aaaggaacgc catagcaatt tgttttcatt gaatcgaggg tgatgatctc tttatcttca
     1801 ttatcataca caacaaacgt acgtttccat ccagcgctta tttcttcctt gttgacttta
     1861 gcgactaaat gggctgcggc tgcagctgcg gatctttgta acaccaatac cttgtcgttg
     1921 ttttcgtcat ctgggctggc gctcacagat ttcccttgcg cagagaccgt gattgttatc
     1981 ttctgtgaaa agccgcatac cgcgaccgca atcgacatca gaagcaaaaa cgttttcatt
     2041 caataaatca gtaatgagtg atcagtagtg agaatcttaa ctcggcaaca tcaaacatca
     2101 aacttcaaac cgcaaccatt ctaccacttc aacaatgcac ttgcccaggt aaaaccactt
     2161 ccaaatgcag cgaggcaaac gaggtccccc ctttttattt ttccttcctg ccacgcttcg
     2221 cataacgcaa gcggaacaga ggctgctgtt gtgttcccgt atttctgaat attgttatac
     2281 acctggtcat cgcgcaactt taatttttgc tgcacaaact ggctgatgcg caagtttgcc
     2341 tggtgcggaa taagcatagt aagatcggag ggcttgtagc catttgtatc gagcgcctcc
     2401 atgatcactt ccggaaattt tattacggct ttcttaaata cagtcggacc atccatgaac
     2461 ggaacatttt ggtttttgtc gatcatcgta tgactaacga acatttcgcc aatgtcagca
     2521 ttgtcgtaat cggccaaacc atctttccaa tgatttgcgt gagacccggg attgaacatt
     2581 gc
//
LOCUS       DASQJI010000158        10823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2625528,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000158 DASQJI010000000
VERSION     DASQJI010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10823
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2625528"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VEV83_04785"
     CDS             <1..510
                     /locus_tag="VEV83_04785"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HYK44459.1"
                     /translation="KVTSPDDLYKAIGKHKPDEKVTITYLRNGKQATTQATLSKSDQM
                     KVYSWNTPEGGFQLRHGEPYDFAFAFDGRPRLGIEAQDTEDANGVKITDVDDGDDESP
                     SPAAKAGLKEGDVITQVNGKAIKSVDELRESLKDVKKGDTVKITYKRNNQTQTIDVKF
                     PRELKTIDL"
     gene            660..1721
                     /locus_tag="VEV83_04790"
     CDS             660..1721
                     /locus_tag="VEV83_04790"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HYK44460.1"
                     /translation="MKFSVLFVLMFLSTAAFAQRKTATFSSIDWRVADIDANSPDTLA
                     IQLTSPYVTDLEKVRAIFRWITEHIEYNTLRSQPYSTVYYDDGIESAHDNDSILQPLD
                     VRVAEIVLKRRVAFCEGYARLFKTLCGYAGIRSEVISGYSRTNMNSGKQFRCNHKWNA
                     VQIDSNWYLLDVTWASGYLNFAGDRFIRDYNDYYFLTPPKNFISDHYPEDIKWALLPD
                     APTLSEFKHSPFKQAAYSPYKISSYSPSRGIIDAYVGDTISIELETSDAKKHLCLLDV
                     PSADSATIALNDSLARANRLTVIKGDKVRCSYVVSSEDVQWLQVIYNGDMVLRYKLDV
                     KRSPLDFPPIKIQPIMGTN"
     gene            1820..3745
                     /locus_tag="VEV83_04795"
     CDS             1820..3745
                     /locus_tag="VEV83_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HYK44461.1"
                     /translation="MKKIASLLMVFNVVTAFCQQNREIAIIPEPVQVTKTSGYFTLPH
                     PVAIEADEKNHLHYAVTFLQQRLSIPTGYNVSVKETAPAADIRLVLNNNKDEQLGSEG
                     YRLSVTPKNIIIKANNAAGIFYGIQTLMQLLPKEIESAELVHDVDWKIPCVEITDYPR
                     FAWRGLMLDVSRHFFTKQEVEQYIDQMARYKFNVFHFSLVNDEGWRIEIKSLPKLTQV
                     GAWNVKRVGHFGDFKPIQPDEPRDYGGFYTQDDIREIVQYAKDRFVDVLPEIDMPGHS
                     LAAIASYPELSCTPGAEKYKVASGEKFMEWPDTGHFYGLVDNTICPANEKVYPFIDKV
                     MTEVAQLFPFEYIHIGGDECARNFWQKSDAVTQLMKRENLKNYDEVQSYFEKRVVKIV
                     ESKGKKAIGWDEILEGGLAPGAAVMSWRGEKGGIAAAKQGHDVVMSPTTFVYLDYMQS
                     DRVMEPHVYASLRLSKTYQFDPVPAGVDAKYIKGGQGNLWTEQVYNFRQAQYMTWPRA
                     FAIAECTWSPKEKKNWNDFIERVEQHFKRFDIEEVKYAPSMYDPDFKATKDAKGRLNI
                     SMSTEIPGLDIYYSFDNSYPDRFYPKYNGPLIPPIDATTLKVITYKGNKPVGRMISMP
                     IDEMQRRADNKKANDED"
     gene            complement(3759..5576)
                     /locus_tag="VEV83_04800"
     CDS             complement(3759..5576)
                     /locus_tag="VEV83_04800"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44462.1"
                     /translation="MLASTLRRICPGLMAVFVFHLNSFCQESLRHSPVINYTLKIDPA
                     DFTSLHVEMDISNLPDTFQVAMVAHPGYDDRYWRFIKDMDVEDKNGKAKIIRQDSALW
                     RIIVNDSRATLSYTLQLPPKERNPSTWKPFIDSSGALIGGTHSFMYVVGATNAPSHIS
                     LQLPKYWQVATSLTPTTAKNVYYAPSVEALTDAPILAGTLKVWPFTVDGIRHDVVYYS
                     KTRISFDSASLVDAIKKIVEQASALFRGLPYKKYLFLLRDNAYGALEHRDCLTLGAPA
                     SELEKDLQPIIADIAHEYFHAWNLMRIRPAEFGDPVYKTPPLSRGLWWSEGLTMFYAD
                     LLLRRAGLPVYDSTRTAHLEKLIARYYNSPGNQKNVEEVSMAEFAPPGLLGDYIGSTH
                     VQGELLGNMLDLLIRYATNGERSIDDAIRKMFEISGGKGFTNGDIEKIVSRICGCEDH
                     QFFNDYITGNKVFDFNVYLQLIGLHATVSWKNAQQDDGKPAPDLRVYAFIPPNQADLQ
                     IGIVDPANCWGNAGLHTGDRLLSINDSLMTSRNDFYSYLRRVHIGDTLYIAIQKASGI
                     SKTRVVITGYQQAWVKIEEIADATEKQKALRSLWVTGKN"
     gene            complement(5753..6388)
                     /locus_tag="VEV83_04805"
     CDS             complement(5753..6388)
                     /locus_tag="VEV83_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44463.1"
                     /translation="MKKFLLSFLVTVVCGVYTQAQTADDTLHKAAIAVCDCLTKANLG
                     TNVTEEQLQQAFLSCVLTSAPDLITQIMASGDDYQKAGEEIGTKLSLELMKTGCPAFT
                     KIAASMALQGDEGISIQTEKPTAVETAEGIVTKVEERDFTYVTLKTTAGRELTFIYYG
                     YVPGSDDWIKDAVTKLKNKNVSVSYAETEVYQPKYKEFMNVKEIKSLTIKK"
     gene            complement(6385..7383)
                     /locus_tag="VEV83_04810"
     CDS             complement(6385..7383)
                     /locus_tag="VEV83_04810"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK44464.1"
                     /translation="MKFLIIRFSSIGDIVLTTPVIRCLKKQLPDAEVHYVTKGEFTTI
                     LESNPYIDKLHVLSDLKTTIRELKQEGFDYIIDLHHNLRTLKIKMSMFNVLSYSFNKL
                     NIEKWLLTNFKINVLPKKHIVDRYMETVTFFNIRNDGRGLDYFIPEKDVVQPSHLPAT
                     HVHGFITIAIGAAHNTKKLPLHKLKELCGLIDHPIMLLGGKQDRAIADEITSTDAIKI
                     YNACGKFNLNESADLIRKSKLLITHDTGLMHIAAALQKPIISVWGNTVPQFGMYPYYG
                     NNEIRHVKFEIQHLPCRPCSKIGYNRCPLTHFKCMELHSMNELSKTITGFLKKSDR"
     gene            7648..8442
                     /locus_tag="VEV83_04815"
     CDS             7648..8442
                     /locus_tag="VEV83_04815"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK44465.1"
                     /translation="MKKSTSLYLLLIAFLTSNFNCKKDSRVPTGVSSNEIVHVQTATL
                     TLDSGLLCYLPFNSNLKDKSGQGNNGTLQGGNISYVADRFGIASRAISFSASNSWIEI
                     PEADFAGLKTATIAMDFYPTTTGQQVLISKMSYSAAIGSPDFYQSFAIVFEATAQLGF
                     EIRQKGLCNGTTGWNPVLYSNVAVILNTWNHIAITFNNTRQKMYLNGNLVSSGTKTAS
                     PICQGEPIRLGIWWQTDPEFYTGNMDEVRIYDRVLSQQEVKQLSKK"
     gene            complement(8498..8584)
                     /locus_tag="VEV83_04820"
     tRNA            complement(8498..8584)
                     /locus_tag="VEV83_04820"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8548..8550),aa:Leu,seq:taa)
     gene            complement(8664..8736)
                     /locus_tag="VEV83_04825"
     tRNA            complement(8664..8736)
                     /locus_tag="VEV83_04825"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8701..8703),aa:Gly,seq:gcc)
     gene            complement(8885..9085)
                     /locus_tag="VEV83_04830"
     CDS             complement(8885..9085)
                     /locus_tag="VEV83_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44466.1"
                     /translation="MEHETDYKEKDFGYNWVNSSRFLFYLQVLCFAALTVGMCYNLYL
                     HRYKGKPDVQVPANTLYTPEYK"
     gene            complement(9127..10155)
                     /locus_tag="VEV83_04835"
     CDS             complement(9127..10155)
                     /locus_tag="VEV83_04835"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK44467.1"
                     /translation="MHFPSAAVVILNYNGRNYLERFLPSVIDTNYPNKKIIVADNAST
                     DDSVLFLATNFEEVEIILLDKNYGFAGGYNRALKKVKADYYVLLNSDVEVTSDWLTQV
                     IALMEKDLQIAACQPKILSWHNKKIFEHAGACGGWIDALGYTFARGRVFDVCEEDTGQ
                     YDSTSEIFWATGAALCIRTNCFHELNGLDAYLFAHMEEIDLCWRLQRHGYKIFCCPEA
                     VVYHVGGGTLPKTNSRKTFLNFRNNFIILLKNLSLAEGLWKIPARMFLDWLFAFKILI
                     QGDVKSFTAVFKAHGGVLKWIFTSRKYAKLPTTKLNKLTGVYRGSIVWGYFIRKKRHF
                     SEFVRAKE"
     gene            10276..>10823
                     /locus_tag="VEV83_04840"
     CDS             10276..>10823
                     /locus_tag="VEV83_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK44468.1"
                     /translation="MFGVTILGNNSALPAHDRHPTAQVVTMSDHLFLIDCGEGTQIQM
                     NAYKIRRSRINHIFISHLHGDHYFGLPGLITSYGLLDRIHDLHLYAPAPLKTILDLQL
                     SMSGTELPYPLHFHALEEEDELINEEKFSVNCFKVFHRIDCWGFLFREKRNPRKINGE
                     QTTKYQVPITYFEKLKHGEDYIA"
BASE COUNT         3134 a         2337 c         2388 g         2964 t
ORIGIN      
        1 aaggtcactt cgcctgacga cctgtataaa gcgattggca aacacaagcc ggacgaaaaa
       61 gtcacgatca catacttaag aaatgggaag caggcaacta cgcaagcgac gcttagtaaa
      121 tcagatcaaa tgaaagtcta ttcatggaac actcccgaag gtggctttca actgagacat
      181 ggtgaaccat atgattttgc tttcgctttt gatggaaggc ctcgtttggg tatcgaagcg
      241 caggacacag aggatgcgaa tggcgtgaag atcacggatg ttgatgacgg cgatgacgaa
      301 tcaccatcac ctgcggcaaa agcgggtttg aaggaagggg acgtgataac gcaggtaaat
      361 ggaaaggcca ttaagtccgt cgacgagctt agggaaagcc tgaaggacgt aaaaaaagga
      421 gatacggtca aaatcactta taaacgcaac aatcaaacac aaactattga cgttaagttt
      481 ccaagagaat tgaaaacgat cgatctctga tagtttcatt tttctcatgt gcaatcaccg
      541 ctgctttcca gcagcggttc ttttttgccc atactttaaa ttttcgattg caaaaatttc
      601 caggcgtgat ctattttatg ctgtaatttt attccgctta cctgtagagt ctgcggcgta
      661 tgaaattttc agtattattt gtgctcatgt tcctgtcgac tgcggctttt gcgcagcgca
      721 aaacagctac cttttcgtcg atcgactggc gcgttgcgga tatcgacgca aattcgcccg
      781 atacgcttgc aatacaactc acatcgccgt atgtcaccga cctcgaaaaa gtgagagcca
      841 ttttccgttg gataacagaa catattgaat ataacacgct gcgcagccag ccgtatagca
      901 ctgtatacta tgatgacggc attgaatcgg cgcacgataa cgattcgata ttacaaccgc
      961 tggacgttcg cgttgcggag atagtgctga aacgaagggt cgcgttttgc gaaggttatg
     1021 cgaggctctt taaaacactt tgcggttatg ccggtatcag gagcgaggtt atcagcggat
     1081 actcgcgcac gaacatgaac agcggcaagc agttccggtg caaccataaa tggaatgccg
     1141 ttcagatcga cagtaactgg tatttgcttg acgttacgtg ggcaagtggc tacctgaact
     1201 tcgcaggcga ccggttcatt cgtgactaca acgattatta ttttcttacg ccacctaaga
     1261 attttataag cgatcattat cctgaagata tcaaatgggc gctgctgccg gatgctccaa
     1321 cgctttcaga atttaaacac tcaccattta aacaggctgc atacagtcct tacaaaatat
     1381 cgtcttactc gccttccagg ggaattattg acgcatatgt gggtgacacg atttcaatcg
     1441 aattggaaac aagcgacgca aaaaagcatc tttgccttct cgatgttcca tctgctgact
     1501 ccgcaacgat cgcattaaat gactcgttag cgcgagccaa tcgtctcacc gttattaaag
     1561 gtgacaaagt gcgatgcagt tatgtggtat cttcagaaga tgtgcaatgg ctgcaggtga
     1621 tttataacgg agacatggtg cttcgttata agctcgatgt taaaaggtcg ccactcgatt
     1681 tcccgccgat caagatccag ccgatcatgg ggacaaatta aaccgcaaat tattcccggt
     1741 tcctatagct atttaccccg cagaaacact gatatctatt cttgccttat ttttatcgcc
     1801 taaaaacatt ttttgcgaaa tgaaaaaaat tgccagcctg ctgatggtct tcaatgtcgt
     1861 tactgcgttt tgtcagcaaa acagggaaat tgcgattatt cccgagccag tacaggtcac
     1921 gaaaacgtcc ggatatttta cattaccaca tccggttgct atagaagccg acgaaaaaaa
     1981 ccatttacat tatgcggtga ctttcttgca gcaaaggctt tcaattccta cggggtacaa
     2041 cgtctcggta aaagaaacgg cacctgctgc ggatataagg cttgttctca ataacaacaa
     2101 agatgagcag ctcggctccg aaggttaccg gttatctgtg actccaaaga atatcatcat
     2161 taaagcaaac aacgcagccg gaatatttta tggtattcaa acgctgatgc aattgttgcc
     2221 aaaagagatc gaaagcgcgg aacttgtaca tgacgttgat tggaagattc cctgtgttga
     2281 aataacggat tacccgcgat tcgcgtggcg tggcctgatg ttggacgtat caagacattt
     2341 ctttactaaa caagaagtgg aacaatacat tgatcaaatg gcgagatata aattcaatgt
     2401 ttttcatttc agcctggtta atgacgaagg ctggcgcatt gagataaaat ctttgcccaa
     2461 actaacacaa gtaggtgcat ggaatgtaaa acgcgttggt cactttggag attttaagcc
     2521 gatacagccg gatgagccac gcgactatgg aggcttctat acacaagatg acataaggga
     2581 aatcgtgcaa tatgcaaaag acagattcgt tgatgtttta cctgaaattg atatgcccgg
     2641 acatagcctc gctgcgattg cttcgtatcc tgaattgtcc tgcacgccgg gtgctgaaaa
     2701 atacaaagtg gcttcgggcg aaaagttcat ggagtggccc gatacaggtc atttttatgg
     2761 cctggttgat aatactatct gtcctgcaaa tgaaaaagtt tatccattta tagataaggt
     2821 gatgaccgaa gttgctcagt tgttcccgtt tgaatatata cacatcggcg gcgacgaatg
     2881 cgcgcgaaac ttttggcaaa aaagcgacgc agtgacgcaa cttatgaaaa gagaaaactt
     2941 gaaaaattat gacgaggtgc aaagttattt tgagaaacgg gtagtaaaga ttgttgagtc
     3001 aaaagggaaa aaagccattg gatgggatga gatcctggaa ggaggcctcg cgcctggtgc
     3061 cgctgtgatg agttggcgag gcgagaaagg tggaattgca gccgctaagc agggacacga
     3121 tgttgtgatg agtccaacta catttgttta cctggattat atgcaaagcg atcgtgttat
     3181 ggaaccgcat gtatatgctt ctcttcggtt gagtaagaca taccagttcg accctgtccc
     3241 cgcaggcgtt gatgcaaagt atatcaaagg aggccaggga aatttatgga ccgaacaagt
     3301 atataatttc aggcaggctc agtacatgac gtggccgcgc gcttttgcaa ttgcagaatg
     3361 cacctggtcg ccaaaagaaa aaaagaactg gaacgatttt attgaacggg tggaacaaca
     3421 tttcaaacgt tttgatattg aagaagtgaa atatgcaccg agcatgtacg atccggattt
     3481 caaagcgaca aaagacgcga aaggccggct gaatatttca atgtcgaccg agataccggg
     3541 actggatatt tattacagct ttgacaattc gtatccggac agattttatc cgaaatacaa
     3601 tggccctctc attccaccga tcgatgcaac cacattaaag gtgatcacat acaaaggaaa
     3661 caaaccggtt ggaagaatga tcagtatgcc gatcgacgaa atgcaaagaa gagcagataa
     3721 caaaaaggcc aacgacgagg attgatgctg ctggcagttt aatttttccc cgtcacccac
     3781 aacgagcgaa gtgctttttg tttttcggtg gcgtcggcta tttcttcgat tttaacccac
     3841 gcttgttggt agccggtgat cactactctt gttttcgata ttcctgaggc tttctgaatt
     3901 gcgatgtata aagtgtcgcc tatgtggacc cgtcgcaggt atgagtagaa gtcatttctg
     3961 cttgtcatta gcgaatcatt gatcgataga aggcggtcac cggtatgaag gccagcgttt
     4021 ccccaacaat tagcaggatc gacaattcct atctgaaggt ccgcctggtt tggcggtatg
     4081 aacgcatata cccgaaggtc gggtgcaggc ttgccatcat cctgttgtgc gttcttccac
     4141 gacaccgttg catgcaagcc gatcaattgc aaatacacgt tgaagtcaaa aaccttattg
     4201 cctgtgatat aatcattgaa aaattggtgg tcttcgcagc cgcaaattcg cgacacaatt
     4261 ttttcaatgt ctccgttcgt aaaacctttt ccaccagaaa tttcaaacat ttttcggata
     4321 gcatcatcaa ttgatctttc tccgtttgtt gcgtatcgaa taagaagatc aagcatattg
     4381 cccaaaagtt caccctgtac atgtgtgctc ccaatatagt cccccagcag gccgggtggc
     4441 gcgaattcag ccatactgac ctcttcaaca tttttttgat taccgggact gttgtaataa
     4501 cgggctatca gtttttctaa atgcgctgtc ctggttgaat cgtaaacagg caaaccggcg
     4561 cgccttaaca aaaggtcagc ataaaacatc gtcagtccct cgctccacca caggccgcgc
     4621 gacaggggcg gcgttttgta taccgggtcg ccgaattctg caggacggat gcgcataaga
     4681 ttccatgcat ggaaatattc atgcgcgatg tcagcgataa ttggctgcaa gtctttttcc
     4741 agttctgaag ccggagctcc gagcgtcaaa cagtcgcgat gttccaatgc tccgtaggca
     4801 ttgtcgcgca acaaaaacaa atattttttg tagggcaacc cgcggaaaag agcggaagct
     4861 tgttcaacaa ttttttttat cgcatccacg aggctcgcac tatcaaagga tattcgagtt
     4921 tttgaatagt aaacaacatc atgccgaatg ccatcaaccg taaatggcca aacttttagt
     4981 gtgccggcta agattggtgc atcggtcaat gcttcaacag aaggcgcgta ataaacattt
     5041 ttagcagttg ttggtgtcag gctcgttgca acctgccaat actttggaag ctgcaagctg
     5101 atgtgcgacg gagcatttgt tgcaccgaca acatacatga atgaatgagt gccgcctatc
     5161 aatgcaccgg acgagtcgat aaatggtttc catgtggatg gatttcgttc tttcggtggt
     5221 aattgcaacg tataactgag agttgcccgc gaatcattaa ctatgatgcg ccaaagagcg
     5281 ctgtcttgcc ggataatttt ggccttacca tttttatcct caacatccat atcctttatg
     5341 aatcgccaat accggtcatc gtatccaggg tgtgcaacca tagcgacttg aaaagtatca
     5401 ggcagattgc tgatatccat ttcaacgtgc aacgatgtaa aatcagccgg atcgatcttt
     5461 agcgtataat ttatgaccgg gctgtggcga agagattcct ggcagaagct atttaagtga
     5521 aaaacaaaca cagccatcaa gccaggacag attcttctta aagttgatgc tagcattact
     5581 caaaattaga acgggtaacg cctaaccgat gccgcattac atcaactgaa agaatttctt
     5641 tatgaaacgc gcgaaatctg taacgatttt gaaatggacg ttatcgacag agaaagaaag
     5701 tttgtgtcca cataccggga cttaagcccg acgcaggtga gcaggtacga acctattttt
     5761 ttatggtcaa tgattttatt tcttttacat tcataaattc cttgtacttc ggctggtaca
     5821 cttcggtttc ggcataagaa actgaaacat tcttattctt caatttcgta accgcatctt
     5881 ttatccaatc gtcggacccc gggacataac catagtaaat aaaggttagt tcgcggccag
     5941 cagttgtttt caacgttaca tacgtaaaat ctctttcttc aaccttcgtt acaattcctt
     6001 cagcagtttc tactgcagtt ggcttctctg tttgaataga gataccctcg tcgccttgta
     6061 aagccatcga tgcagcgatc tttgtgaacg cagggcaacc ggtcttcatt aattccaaac
     6121 tcagttttgt accaatctcc tctcctgcct tttgataatc atcgccactg gccattatct
     6181 gagtgataag atccggcgcc gatgtaagaa cacagctaag aaatgcctgc tgcaattgct
     6241 cttctgtaac attggtgccc aggtttgcct tggttaaaca atcacatacg gcgatcgcag
     6301 ctttgtgcag ggtatcgtct gctgtttgtg cctgtgtgta aacgccgcaa acaacagtga
     6361 ccaggaaact taaaagaaat tttttcatcg atctgatttt tttagaaatc cggttatggt
     6421 tttcgaaagc tcattcatgc tatgcagctc catacattta aaatgtgtta gcgggcacct
     6481 attgtaaccg atcttgctgc atggcctgca aggtaaatgt tgaatttcga atttgacgtg
     6541 ccgaatttca ttatttccat agtaaggata catgccaaat tgaggaacgg tatttcccca
     6601 aacggaaatt attggttttt gcaaggcggc ggcaatatgc attaacccgg tatcatgtgt
     6661 aataagaagc tttgattttc tgatcaggtc cgcgctttca ttcaaattga actttccgca
     6721 agcattgtaa attttaatgg catcggttga cgtgatttca tctgctatcg ccctatcttg
     6781 ttttccgccg agaagcatga tcggatggtc aattagccca catagctcct ttaatttatg
     6841 caacggaagc ttttttgtat tgtgtgctgc gccgatcgct atcgtgataa aaccatggac
     6901 atgcgttgca ggcagatgtg aaggttgtac cacatctttt tcagggatga aataatccag
     6961 ccctctccca tcatttcgta tattaaaaaa tgtcaccgtt tccatgtagc gatccacaat
     7021 atgtttttta ggcaagacat ttattttaaa atttgtgagc agccattttt caatgtttag
     7081 cttattgaac gaatagctca aaacattgaa cattgacatc ttaattttca acgtacgcag
     7141 attgtgatgc aggtcgatga tgtaatcgaa accttcttgt ttaagttccc tgattgtcgt
     7201 tttaaggtcc gataatacgt gcagtttgtc gatgtaggga ttactttcaa gtatcgttgt
     7261 gaattctcct tttgtaacat aatgcacttc ggcatccggc aattgcttct tgaggcaccg
     7321 gataacgggc gtagtaagga caatatcccc aatggaagag aaacgaatga tgaggaactt
     7381 cattgcatta aaattatacg cataacggtt gctaacaaaa gatgtggaat taattaattc
     7441 tgatagggca agattaaatg tttctttaat cgccatcggt cggcattctg tttctattcg
     7501 ccgcggacct ggctaattcg cagaaccatg gtgacctatg aaggaatcat aaaagaattt
     7561 gtgcgggtca tagaaaggta ttgttcaaga caacttagaa tagttgttga aagaacatat
     7621 attgcacgga tcaaaactgg ctcaaaaatg aaaaaaagta catcgcttta tttattatta
     7681 attgcgtttc taacttcaaa tttcaattgc aaaaaagatt cccgtgtacc tacaggcgtc
     7741 agttcaaatg agattgtgca tgtacaaacg gcaaccttaa cgcttgacag cggtttatta
     7801 tgttatttgc catttaacag taatctcaag gataaaagcg gccagggaaa caacggaacg
     7861 ttacagggag gtaatatttc atacgttgcg gacaggtttg gaattgcttc acgtgcaata
     7921 tcattcagtg cctcaaattc atggatcgaa attcccgaag cagattttgc agggctgaaa
     7981 acagccacga tcgctatgga tttttatccc accacaacag gtcaacaagt tctcatcagt
     8041 aaaatgtcat acagcgcggc gatcggctcg cctgattttt atcaatcatt tgctatcgta
     8101 tttgaagcaa ccgcacaact aggttttgaa attcgtcaaa aaggattgtg taatgggacc
     8161 acagggtgga accctgtttt gtatagtaat gttgccgtta ttctaaatac ctggaatcat
     8221 atagcaataa catttaacaa cacccggcaa aaaatgtatt tgaatggaaa tcttgtttct
     8281 tccggtacaa aaactgcgag cccgatctgc cagggagagc caatcagatt aggaatctgg
     8341 tggcagactg atccggaatt ttataccggc aatatggatg aagtgagaat ttatgataga
     8401 gttttgtcgc agcaggaagt gaaacagctt tcaaaaaaat aactctacgt ttgggtggat
     8461 ttcttagatc cttccctctt gtgcaaggat cttaaagtgc cccgggcggg aattgaaccc
     8521 gcactcgctt tttcggcgaa caggatttta agtcctgcgt gtctaccagt tccaccacca
     8581 gggctttaaa aagtttgagg tttgaagttc gatgttcgat gtcataaaac gtcaaacctc
     8641 aaacgccaaa cctcaaactt aagagcggaa gaccgggctc gaaccggcca ccctaacctt
     8701 ggcaaggtta tgctctacca aatgagctac ttccgcatga atatttagga tgtgggattt
     8761 caggatttag gatttcatac cattggtctg agtcataact cctaatccaa aatcgggcat
     8821 tcgtaaatca aagaacaggg gtgcaaaaat aggaatctgc actgcaaccc aaaaatttta
     8881 attgttattt atattccgga gtgtaaagcg tattggcagg aacctgcacg tcgggcttgc
     8941 ccttatagcg atgaagataa aggttgtaac acatgccgac agtaagcgca gcaaaacaaa
     9001 gaacctgcag gtaaaacaaa aacctggacg agttcaccca gttgtatccg aagtcttttt
     9061 ctttatagtc tgtttcgtgt tccataagaa aatttaacat cgcaaaaata aggcgtgcgc
     9121 atcaaattat tcttttgcac gcacaaattc tgaaaaatgc cgcttcttcc tgataaaata
     9181 tccccaaacg atcgacccgc ggtaaacacc ggttaactta ttcagtttcg tcgtcggaag
     9241 tttggcgtac ttccgtgacg taaatatcca cttaagcact cccccgtgcg ctttaaaaac
     9301 agccgtgaag ctttttacgt caccctgtat caggatctta aaggcaaaaa gccagtcgag
     9361 gaacatgcgc gcaggaattt tccacaagcc ttctgcaagg gaaagatttt tcagcaggat
     9421 aataaaattg tttctgaagt tcagaaaagt tttgcggctg tttgtctttg gaagcgttcc
     9481 gcctcccacg tggtaaacga ctgcctcagg acagcaaaat attttatagc cgtgacgttg
     9541 caaacgccag cacaggtcga tctcttccat gtgcgcaaaa agatatgcgt cgagaccgtt
     9601 caactcatga aagcaattcg tgcgtataca caacgccgca cctgttgccc aaaaaatttc
     9661 cgacgttgaa tcgtactgac ccgtgtcttc ttcgcacacg tcaaataccc gtccccgtgc
     9721 aaacgtgtaa cccagtgcat cgatccaacc accacacgca ccggcatgtt caaaaatttt
     9781 tttgttgtgc catgacaata tttttggctg gcaggcggcg atctgcaggt ccttttccat
     9841 gagcgcaatg acctgggtca accaatcgga cgtcacttca acatctgaat tcaggagcac
     9901 ataataatcg gcctttactt ttttaagagc cctgttatac ccgcctgcaa atccataatt
     9961 tttatcgagc aaaatgattt caacttcttc aaagtttgtc gcgaggaata aaacactatc
    10021 gtcggtcgag gcgttatctg ccacaatgat cttcttgttg ggataatttg tatcaataac
    10081 cgatggtaaa aatctttcga gataattacg gccattataa ttgaggataa cgacggcggc
    10141 agagggaaaa tgcaaataag tttttttcaa aataaaggaa aaatgaatcg cggcaggcgt
    10201 tttatcgtgc acgttttggt aaaatgttcc aactggctta agttgcaaca acggtaaaga
    10261 gaaaaatcaa cgagtatgtt tggagtgact atcctgggca ataattccgc tttgccggca
    10321 cacgacaggc accccaccgc acaggtagtt accatgagcg accatctctt tttgatcgac
    10381 tgcggcgaag gcacgcaaat acagatgaat gcatacaaaa ttcgccgaag ccgcatcaat
    10441 cacattttca tttctcactt gcatggagac cattatttcg gtctgcccgg tctcattacc
    10501 agctatgggt tgctcgacag aatacatgac ctgcatttgt acgcacccgc gccactgaaa
    10561 acaattcttg atctgcagtt gagcatgtct ggtaccgaat taccgtaccc attgcatttt
    10621 cacgcgctgg aagaagagga cgaactaata aacgaggaaa aattttcagt gaactgcttt
    10681 aaagtttttc atcgtataga ctgttggggc ttcttatttc gggaaaaaag aaatccgcga
    10741 aagatcaacg gtgagcaaac aacaaaatac caggtaccga tcacatattt tgaaaagctc
    10801 aaacacggtg aagactatat agc
//
LOCUS       DASQJI010000159        10726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2932278,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000159 DASQJI010000000
VERSION     DASQJI010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10726
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2932278"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VEV83_04845"
     CDS             complement(<1..777)
                     /locus_tag="VEV83_04845"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HYK44469.1"
                     /translation="MKAISKIFRSRYAWIFFLVLLVLAIYVSASLRYRIDLTAEKRFS
                     LNQSTKKLLEDLDSTVDVTVFLTGDLPADYKKLSIASRDLLSEFRDVSHNHVIFHFEK
                     PGERLSDSGKRAIYRRYLNNISDIDDNTKDSIYFQVSKSNDSLNSVVQQILVDSLSKI
                     GVVFDQSETHLSANHNDGVQEYVIPSAILNYNDHLPVVIDLRSSRTVFKNYNVVDQEP
                     QEDKEATLNSAEALLEYKFADAIEKLTRKNVPVIAYTLGNG"
     gene            complement(774..1502)
                     /locus_tag="VEV83_04850"
     CDS             complement(774..1502)
                     /locus_tag="VEV83_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYK44470.1"
                     /translation="MWMICKKEWNQFFSSLTGYIALIVFLLLNGLIFFVFPNTSLLDF
                     GYASLEGFFSLAPWILLFLIPTITMRSFADEYKGGTFELLKTFPVTPVQIVWGKFFGA
                     LLIVLLALLPTAVYAFSLQHLSSQGGIDAGASIGSYIGLFLLGSVFTSVGLCASSFTN
                     NTVVAFISGAFVCLLFYAGFQAVASLPVFANGNDYYVQMLGIDFHYSSISKGVIDIRD
                     VIYFLAVIIFFILLTKRNLQTRQA"
     gene            complement(1615..2394)
                     /locus_tag="VEV83_04855"
     CDS             complement(1615..2394)
                     /locus_tag="VEV83_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HYK44471.1"
                     /translation="MTQNVVSYQIADSIDVKEFSAAFKAELSYNDPSELFYKTGEGQY
                     AYIFKYGAICFLNYDVVRISEFINFIKPFCRNLFEKSLTDEFIVETDARELRVGFNKI
                     DIPSADIDVLRLVMLNVSQSVALDYYEEQTNKLLEETNFFTQRLEKNGKLNISAKKLK
                     QYIGRTLLLKNRIAENIYVFDSPPETWENENLTKIDADLKRTFDLQVRVRTIQEGLNI
                     IRDNLELFRGLLQYRNSNILEWIVIILILLEVLNLIIEKLF"
     gene            complement(2490..3179)
                     /locus_tag="VEV83_04860"
     CDS             complement(2490..3179)
                     /locus_tag="VEV83_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44472.1"
                     /translation="MKQIFLLLLCFRFAPTAHSQDMTDLINKVKAKLDRVNDYTADGI
                     LKTDVAFIKAPVSKVKMYYKKPNHFRLKKDNGISVLPKGGISINMSNIVSMTNFVALA
                     AGDVTVDGVPTKVVKLLPADENSEIVLSTLYIDEANLLIRKAVTTTRENGTYEMNMSY
                     GKYASYGLPDKILFSFNAKDYKLPKGITMDFDEGTQASDLDKLKDKKGKVEITYTSYT
                     INRGVDEAIFK"
     gene            complement(3321..5156)
                     /locus_tag="VEV83_04865"
     CDS             complement(3321..5156)
                     /locus_tag="VEV83_04865"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HYK44473.1"
                     /translation="MTPEKVSITIVCLVILVCPVLGQHSVGKNNNSTARVLCQHLPAD
                     FTVEFNVCDQYQIDFENNSLSASAVAWDFGDGSTSNGKDSVSHVYKAEGLYKVTLVVL
                     NQNGCNDTIVKPFLLSIDKGNIFSSKNVSVCTGASFRMPGDPDAFKNCWSPAKFLSAT
                     DTYDPLCTPTTDVAYQYNIIKKGATVITNGNFSNGNNGFYTDYIFDSTINTSGHYFVG
                     PKPKQWNPLYDNCFMDTTTFIGDTMLIVNGGTQKGMLVWDSTVTVAPNTNYIFSFFAQ
                     SLTITDSVVLSSSINGGEVIDHTHLSPTPCIRQRIMTTWYSDSNTTVSIKITDLDTNA
                     VKNDFAIDSITFRPIYLKTDSIFVAITPAPLFTVDPPSSIICSGDSVMLTAAGGDSYS
                     WSPSATVAQPNAPGTLVSPVSNTNYKVVITESSCNISDSLFVNVLVKPKPVVNATKSN
                     DLTCTIIQANLNATGGISYHWWPDSTLSDANIPNPIAQPHDNTIYHVSVTGENGCTAE
                     DSVQVLILKDKDAQGYLLPSAFTPNNDGLNDCFGIRKWGNVTDLQFFVFNRWGNRIFS
                     GTNASDCWDGMYKRMPQPAGTYIYYLRGNTLCGYVERKGTIVLLR"
     gene            complement(5370..5822)
                     /locus_tag="VEV83_04870"
     CDS             complement(5370..5822)
                     /locus_tag="VEV83_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44474.1"
                     /translation="MRKTTLIVAAMFSVIAARSQHLPDVASIKLDKKEDFNMAANDAA
                     LQVSVYLLTTPIEKSNADRDLAGAYLLKWMKGTPDFYFSLDEDAAELAERDNALFIVF
                     MAAMSKYVLQNPSEAADIKKVKLNSVKMLIEYAKDPKNNANADLKKTI"
     gene            6075..6623
                     /locus_tag="VEV83_04875"
     CDS             6075..6623
                     /locus_tag="VEV83_04875"
                     /inference="COORDINATES: protein motif:HMM:NF022838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HYK44475.1"
                     /translation="MKTLKNCVVVATVAIMLSSLTTFGFAAAPGPSGSKVTIAGKDTV
                     VVPDNVRVTFQAKYPQATNVVWYKVQDMKDDEFTDTYPGLYDPSDYYVTYNTDGTEYV
                     TWYSPTGEWVMTTNTISSDKLPAPALKSLQDAYNGFTIVKVDEDRYNGGTRYDVKMTK
                     GDEKLKVHVTADGQILKVKDKQ"
     gene            6831..7355
                     /locus_tag="VEV83_04880"
     CDS             6831..7355
                     /locus_tag="VEV83_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK44476.1"
                     /translation="MKKLIYPAAAIMIMAASAFTVIKSQNWTIADNYSVKFDGGDPSG
                     EFKGLKGTVNFDPANLETSKFDVSIDVATINTGNGMKNTHAKSAMWFDAEKYPLIKFT
                     SSAISKTASGYEAKGILELHGVQKEVSIPFTFQNNVFAGSFEVNRMDYNINTAEPNHG
                     AATFKVDISVPVTQ"
     gene            7359..7760
                     /locus_tag="VEV83_04885"
     CDS             7359..7760
                     /locus_tag="VEV83_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44477.1"
                     /translation="MFKKIFFHAITAAVLASVAAIIYTRIYFFATEADFSKVLNTTSV
                     IGLNAIICLLAAFLFWILQVSMKKKGEVIFNFVFSIASFACVIIPISLTLPLDIEFPE
                     LFPGLAVPMIFFPAVAWYTVQPLFVPKDTKS"
     gene            complement(8010..8453)
                     /locus_tag="VEV83_04890"
     CDS             complement(8010..8453)
                     /locus_tag="VEV83_04890"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44478.1"
                     /translation="MMESMYKKNIILYADDDKDDQQLVQEAFERYASNVKIILADNGV
                     EALDYLNSLLPIEPAPCLIILDINMPRVDGKEALVQIRKTERFAHIPIILFTTSSQPQ
                     DKMFAAKHKAGFITKPIDGNQMRLIADIFIDHCSDEIKRSIRVAQ"
     gene            8440..8739
                     /locus_tag="VEV83_04895"
     CDS             8440..8739
                     /locus_tag="VEV83_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44479.1"
                     /translation="MLSIIRAGLLLLFDNAIFNSNQYQFIHLNLIQVRVEDVGGLTYM
                     KTFYLPAILHKKYFDIKAVHLVQHGSKTIQCPFADIYAFLIQQLSFRIVWQRFKG"
     gene            complement(8899..9771)
                     /locus_tag="VEV83_04900"
     CDS             complement(8899..9771)
                     /locus_tag="VEV83_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYK44480.1"
                     /translation="MWQLLQIEVYKIFKRPRTYIAFGAIGALIFMVQFGLKVDGQQYA
                     DFMLRSLGGFDVQGKLINGYMVCYIILQLMLVHVPLLVTLISADMISGEANMGTLRLM
                     FAKPYSRTQILFAKFFATCIYTLLLLIWVAILALLLSMFLFGTDDLFLMKTEYIVLIK
                     QDDVFWRYCLAFCYAFAALVTVAAVGFFLSVFAENSIGPIVATMSLIVFFTVIGALDL
                     PVFRVITPYLFTTHMVTWKEFFDEKVNADNEAIAGSIQNLPQIFHSLIILFAHIIVLL
                     SASVWFTNKKDVLS"
     gene            complement(9749..>10726)
                     /locus_tag="VEV83_04905"
     CDS             complement(9749..>10726)
                     /locus_tag="VEV83_04905"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK44481.1"
                     /translation="PGYLFFFHASIFERMQPVVQTRNLSKHYRNIKAVDELSFTVQQG
                     DVYGFLGQNGAGKSTTIRMLLTLVQPTKGEIELFGMKLHAHRKQILRRIGAVIEKPDV
                     YKFLSAYHNLRLFARMSGVDPAEKELMHQLDMVGLADRAHDKVKTYSQGMKQRLGIAI
                     ALIHDPQLIILDEPTNGLDPQGIADIRNLILHLSRDLKKTVVVSSHLLNEMEQIATRL
                     LIIDRGRKLVEGTTTELFDPSRMLLELDTLDNKSALTLLENSQWQKCLQPERNNVLLL
                     KMHRNDIPDFHIWLVQQNIKIISLQSRHSLEDYFLQVTSGTQHVATFAN"
BASE COUNT         3053 a         2355 c         2306 g         3012 t
ORIGIN      
        1 accattgccc agtgtatagg cgatcaccgg gacgtttttt ctcgtcagct tttctatcgc
       61 atctgcaaac ttgtattcaa gcaaagcttc agcagaattg agtgttgctt ctttatcttc
      121 ctgcggttcc tggtcaacga cgttatagtt cttaaacacc gtgcggctgc tgcgaaggtc
      181 aattactact gggagatgat cgttataatt cagtatcgcc gagggaataa catactcttg
      241 gacgccatca ttatgatttg ccgacaagtg ggtttccgac tggtcaaaaa caacaccgat
      301 tttcgaaaga ctatcgacta aaatctgctg aaccacacta ttcaagctgt cattactctt
      361 gctgacttga aagtaaattg aatccttagt gttatcgtct atgtcggaga tattattcaa
      421 ataccgccga taaatcgccc gcttacctga gtcacttaac ctttctcctg gcttttcaaa
      481 atgaaatatc acatgattgt ggcttacgtc gcgaaattca gaaaggagat ctcttgaagc
      541 gatgctgagt ttcttataat cagccggaag gtcgccggta agaaacacgg ttacatcaac
      601 ggtggaatca agatcctcaa gcaatttttt tgttgattga tttaagctga atcgtttttc
      661 agccgtcagg tcgatccggt aacgaagcga tgccgacacg tatatggcaa gaacgaggag
      721 gacaagaaaa aatatccagg catatcgtga acgaaatatt ttactaatag ccttcatgcc
      781 tgtctcgttt gcagatttcg ttttgtgagc aggataaaga atatgatgac ggcaagaaaa
      841 tagatcacat cccttatgtc gatcacgcct ttgctgatac tcgaataatg aaaatcaata
      901 ccaagcattt gcacataata atcattgccg tttgcaaaaa ccggcaggct cgccaccgcc
      961 tggaagccgg catagaacaa caaacacaca aaggcgccgc tgataaaagc gacgaccgta
     1021 ttattggtga agctgcttgc gcataaaccc accgacgtaa acacagatcc gaggagaaac
     1081 aacccgatat aacttccgat gcttgcgcct gcgtcaatgc cgccctgtga acttaaatgc
     1141 tgcaatgaaa atgcgtaaac agccgtggga agcagggcca gtaagacaat cagcagcgcc
     1201 ccgaagaatt tgccccaaac gatttgaaca ggcgttaccg ggaacgtttt taatagctca
     1261 aatgttccgc ctttgtattc atctgcaaaa ctgcgcatcg taatggtggg gataagaaaa
     1321 agcaatatcc atggcgccag gctgaaaaat ccttcgagcg acgcataacc gaaatcgagc
     1381 aagcttgtat tgggaaatac aaaaaatatc aggccattca aaagcaaaaa aacgatcagt
     1441 gcaatataac ctgtgaggct gctaaaaaac tggttccatt cctttttgca gatcatccac
     1501 atcggccaaa actactatct ataagttctc tgaaagaaga ttttattaat gattaactaa
     1561 aatgaaatga cgccgcatcc tccgcaccga accttgattt tgtgctcatt ttttttaaaa
     1621 gagcttttcg ataatgagat tgagcacttc caataatatc aggatgatga ctatccattc
     1681 caggatgttg ctattgcggt attgcagcaa cccgcgaaat aattcaagat tgtctcttat
     1741 aatgtttagc ccttcctgaa ttgtcctcac cctcacttgc aggtcgaaag tgcgcttaag
     1801 gtcagcgtct atttttgtga ggttctcgtt ctcccaggtc tccggtggtg aatcaaagac
     1861 gtaaatattt tcagcgatac ggtttttcag aagcagcgtc cttccaatgt actgtttcaa
     1921 ttttttcgct gaaatattca gtttaccatt cttctccagg cgctgggtga aaaaattggt
     1981 ttcttcgagc agcttattgg tctgttcctc gtaatagtcg agcgccaccg attgagagac
     2041 gttgagcatc accaaacgca acacatcaat atccgcagac ggtatgtcga tcttgttgaa
     2101 accaacgcga agttccctgg catcagtttc aactatgaac tcgtcggtca gacttttttc
     2161 aaacaaattc ctgcaaaatg gtttgataaa atttatgaac tctgaaatgc gaaccacgtc
     2221 ataattcaaa aagcatatgg cgccgtattt gaaaatgtat gcatattgtc cttcgccggt
     2281 tttataaaaa agttccgagg gatcattgta agacagttcg gccttgaaag cggccgaaaa
     2341 ttcctttaca tcgatcgagt cagcaatttg gtatgatacg acgttttgcg tcatgatgaa
     2401 aattatccgg aacgaggaaa gcgatctgca ttcaatgtga agttaattat ttgccccgcg
     2461 caattttctc acgcgaaaga acacacacgc tatttaaaaa tggcttcatc aacgccccgg
     2521 ttgatagtgt aagacgtata tgtgatctcg accttccctt tcttgtcttt cagcttatcg
     2581 aggtcagatg cctgcgtgcc ttcatcgaaa tccattgtaa tgccttttgg cagcttgtaa
     2641 tcttttgcgt taaaactaaa taatatctta tcggggaggc catagctcgc atacttgcca
     2701 taagacatat tcatttcgta ggtaccgttc tcacgcgtag ttgttacggc tttgcgtatt
     2761 aaaagattcg cttcgtcaat gtataatgtt gagagaacga tctccgagtt ttcatccgcg
     2821 ggcagcagct tgacaacttt ggtgggaaca ccgtccaccg ttacgtctcc tgcagcgagc
     2881 gcgacaaaat tcgtcatact aacaatgttg ctcatgttga tacttatgcc ccctttgggc
     2941 agaactgaaa taccgttatc ttttttcagg cgaaagtggt ttggtttttt gtaatacatt
     3001 tttaccttac tcaccggtgc cttgataaag gcaacgtctg ttttcaaaat gccatctgcc
     3061 gtataatcat ttacccggtc aagttttgcc tttaccttat tgatgaggtc cgtcatatcc
     3121 tgggaatggg ccgtaggtgc gaatcggaaa caaagcagca gaaggaatat ttgtttcatg
     3181 gtattaatca cgatatactt ttcggctgat cagatggaac aggcgggcac ttgctatttt
     3241 ttatgcaaag caaaacaatt aagtgcatgg agtattcaag ggaagcgtta ataaaacgct
     3301 catgttttat tacttccaca ctatctcaac aagacaatag ttccttttcg ttcaacatag
     3361 ccacataatg tgtttcccct gaggtagtaa atgtaagttc cggcaggctg cggcattctt
     3421 ttgtacatgc cgtcccaaca gtcagaggca ttagtcccgg agaatatgcg gtttccccag
     3481 cggttaaaaa caaagaattg aaggtccgtg acattacccc atttacgaat gccgaagcag
     3541 tcgttaagtc catcgttgtt tggcgtaaat gctgacggta aaagatagcc ctgcgcatcc
     3601 ttgtctttaa ggatcagcac ctgcacagaa tcttcagctg tgcacccatt ctcgccggtc
     3661 acggaaacgt ggtaaattgt attatcgtga ggttgtgcga tcgggtttgg aatattcgca
     3721 tctgataatg tgctgtcggg ccaccaatga tagctgatgc cacctgtggc gttcagattg
     3781 gcctgaatga tcgtacacgt tagatcgttc gactttgtag cgttaacaac cggcttcggt
     3841 tttacgagta cgttcacaaa cagtgaatcc gaaatgttgc agctgctttc cgtgattaca
     3901 accttataat ttgtatttga aaccggagag acaagcgtgc ccggcgcatt aggctgggca
     3961 acggtggccg acggcgacca cgagtatgaa tctccgccgg cggccgttag catcaccgag
     4021 tctcctgagc aaattatgga tgacgggggg tcgaccgtga acagtggagc cggcgttatg
     4081 gctacaaaga tcgaatccgt tttcagataa atgggcctaa aagtaatgct gtctatcgca
     4141 aaatcatttt tcactgcgtt cgtatcaagg tctgtgatct ttatcgagac tgttgtgttt
     4201 gaatcggaat accatgttgt cataattctt tgacggatgc acggagtcgg cgacagatgt
     4261 gtgtgatcta tcacctctcc gccatttata gaagagctca acacaaccga atccgtaatg
     4321 gtgagagact gtgcaaaaaa tgaaaatatg tagtttgtgt tcggagcaac ggtgacggta
     4381 gaatcccaca ccagcattcc cttttgagtg ccaccattca cgatcaacat agtgtcaccg
     4441 atgaaagtag ttgtatccat gaaacaattg tcgtaaagtg gattccattg ttttggtttc
     4501 ggacccacga aataatgacc tgacgtattt atagtgctgt caaaaatata atcagtataa
     4561 aagccattat tcccgttact gaaattgcca ttcgtgatca cagttgcacc tttctttatg
     4621 atgttgtact gataggcgac gtcggtcgta ggcgtacata acgggtcata agtatcggtg
     4681 gcactgagaa atttcgccgg agaccaacag tttttaaaag cgtccggatc gccgggcata
     4741 cgaaaagaag cgccagtgca aacactaaca ttcttcgagg aaaaaatgtt gcccttatca
     4801 atgctcaaaa gaaatggctt aactatagta tcgttacaac cattttgatt taatacaaca
     4861 agcgttactt tataaagacc ctctgccttg taaacatgag aaacagagtc ttttccattg
     4921 ctggtagagc cgtctccaaa atcccatgca acggcagacg cggatagtga gttattttca
     4981 aaatcaatct ggtattgatc gcacacatta aattcaacag tgaaatcggc aggtaaatgc
     5041 tgacacaaaa ccctggcggt agaattgtta ttcttgccaa cagaatgctg gcccaatacc
     5101 ggacatacca atattaccag gcaaacgatt gttatgctga ctttttcggg ggtcaatttc
     5161 tacaattaag gcaatttacg acaactgcga atttgcatag caaaaattaa tccacaatgt
     5221 tttaataagc aacgagatgg ggttatgtga taaaaattct taagaaggag ttcgaagatg
     5281 ttggctgcgg gttttaagca gctaaagcaa caaacggttt acttacgtgt actaccgcgt
     5341 ggttttaaag gtgtgatcag gaaaagcact tagatcgttt tcttcaggtc ggcattggcg
     5401 ttgttctttg gatctttcgc atattcgatc aacattttta cgctgttgag ttttaccttt
     5461 tttatatcag ctgcttcgga cggattttgc agtacatatt ttgacatcgc agccatgaac
     5521 acgatgaaga gcgcattatc acgctccgca agttcagccg catcttcatc caggctgaaa
     5581 taaaaatccg gtgtaccctt catccatttc agcaggtatg cgcccgcgag gtcccggtcc
     5641 gcattactct tttcgatcgg tgtcgtcaac aaatacacgg aaacttgcaa tgcagcatca
     5701 tttgcagcca tattgaaatc ttctttcttg tcaagtttaa tagaggcaac gtcgggtagg
     5761 tgctgcgaac gggcggcaat aactgaaaac atagccgcaa cgataagcgt agtttttctc
     5821 ataaacaggt tttagcagta aagttttgag ttcagcagat ttacgctatt atcacgattt
     5881 caaaaaaata atattgtcaa tcggtacgaa ttttttttcg ttgccttctt acttctcgtt
     5941 ttcgactggc acacagacga aaaacagaaa cgaaaaagat gaggattttt atagagatca
     6001 accgttgttt ggcatacatt atgaataaaa gcggttgaaa attctcgatt attttttcac
     6061 taaaaatcga ttttatgaag actcttaaga attgcgttgt tgttgcgaca gtggcaataa
     6121 tgctcagctc acttacaacc tttggattcg ccgcagctcc cggaccgtcc ggcagtaagg
     6181 ttaccatcgc gggcaaagac acggttgtag tgcccgacaa tgtgcgggtt actttccagg
     6241 caaaatatcc gcaggctacc aacgtggttt ggtacaaagt acaagacatg aaagatgatg
     6301 aatttactga cacatacccg ggactatacg acccctctga ttattacgta acctacaaca
     6361 cagacggtac tgaatacgtg acctggtaca gcccaacggg tgaatgggtc atgaccacaa
     6421 atacgatcag cagcgacaag ttgcccgcac cagcacttaa gtccctgcag gacgcttaca
     6481 atggcttcac gatcgtaaag gtggacgaag acaggtataa tggtggaacg aggtatgacg
     6541 taaaaatgac gaaaggcgac gaaaaactaa aggtgcatgt gacggctgac gggcaaatat
     6601 tgaaagtaaa agataaacaa tagtaagttt aagagtttag atgaaaaagg ctgtcccaca
     6661 ttgggccggc cttttttatt gtgtttccct cgtatcgttt gcgcgtgatg agtgcgccaa
     6721 ctataaaacg tgccttttgt cgcaacattt ttccgtgtca tctatttttt ttatgtgaat
     6781 gtgcccggct cgatagtttt accgtcgatt atctcaaaca aaaattttat atgaaaaaac
     6841 ttatttatcc agcggcagcg attatgatca tggctgcttc cgcgttcacg gttattaaat
     6901 ctcagaattg gacgatagca gacaactatt cggtaaaatt tgacggcgga gatccgtcgg
     6961 gggaatttaa aggtctgaaa ggcacggtta attttgatcc ggcgaatctt gagacttcca
     7021 aatttgatgt gagtatcgac gtcgctacca tcaacaccgg caacggaatg aaaaatacgc
     7081 acgccaaaag cgctatgtgg tttgacgccg aaaaatatcc gttgataaaa ttcacgtcat
     7141 cggctatttc aaagaccgca tccggctacg aagcaaaagg cattctcgaa ctccatggtg
     7201 tgcaaaaaga agtttccatt cctttcactt ttcagaacaa tgtttttgcc ggaagttttg
     7261 aagtaaatcg catggattat aacatcaaca cggcagagcc taaccacggc gcagctacgt
     7321 tcaaggttga catttctgtt cccgttactc aataaaaaat gtttaagaag atattttttc
     7381 atgcgatcac ggcagccgtg cttgcctccg tggcggccat catttacacg cgcatttatt
     7441 ttttcgcaac cgaggcagat ttttcaaagg tgcttaacac gacaagtgtt atcggcctga
     7501 atgcgatcat ttgcctgctc gcagcttttc tgttttggat tctgcaggta tcgatgaaaa
     7561 agaaaggcga agtgatattc aattttgttt tttccattgc ttcttttgca tgcgttatca
     7621 ttccgatctc tttaacgctg ccacttgata ttgagtttcc ggaattattt ccgggtttgg
     7681 ccgtacccat gatatttttc ccggccgttg cctggtacac cgtacagcct ttgtttgttc
     7741 cgaaggatac aaaaagttag gggtctgtaa tttaaacttt catcagtcct gcgccgtaag
     7801 aacgcaggac tttttgcttg atacccgctg gacgagctac aaactaaaca gccagtcaac
     7861 aacggcgata atgatcacag caccaataac aataatagcg atcacgtaag gcaatagccg
     7921 tctcttttca tcgtcgtcat ttttcatccg gcaaaagtac taatgtgatg tgcagaaagc
     7981 aggagctcca aatatttgcc tggttcactc tactgcgcaa ccctgataga tcttttgatc
     8041 tcgtcggaac aatgatcgat aaatatatcc gcgatcaagc gcatttgatt tccatcgatg
     8101 ggttttgtga tgaagccagc tttgtgtttt gccgcaaaca tcttatcctg cggctgtgag
     8161 gaggtagtaa ataaaatgat cgggatgtga gcgaaccgtt ccgttttcct gatctgtacc
     8221 agcgcctctt tgccatccac gcggggcata tttatgtcaa ggatgatcag gcagggcgcc
     8281 ggctcgatag gaagaagact gttcaaataa tcaagggctt caacaccatt gtcggccagt
     8341 atgatcttca catttgacgc atatcgttca aatgcttcct ggaccaactg ctggtcgtct
     8401 ttgtcatcgt ctgcatacag gataatgttc tttttgtaca tgctttccat cataagggct
     8461 ggcttattat tgctgtttga taatgcaatt tttaattcaa accaatatca attcattcac
     8521 ctcaatttga tccaggtaag ggttgaggat gtgggtggac tcacttacat gaaaacattt
     8581 tacctgcctg cgatactgca taaaaaatat ttcgacataa aagctgtgca cctggtacag
     8641 cacggcagta agaccattca atgcccgttt gccgacatat atgccttcct tatacagcag
     8701 ttgagtttta gaattgtatg gcagcgattc aaaggttaaa atggttacat cattattgtt
     8761 gacactcata aaaagcaacg ttccttttcg gtatgcagcg ggatcagttt ttaaaaatac
     8821 gaattgccgc gaaactaaaa taattttttg cagaagctat tctttttaac agctgggcaa
     8881 aaatacctcc cggcggtttc aactcagcac atctttttta tttgtaaacc agaccgatgc
     8941 gctcaacaag acaattatat gagcgaaaag aataatgagg gaatgaaata tttgaggcag
     9001 gttttgtatg ctgccggcaa tagcctcatt atctgcattc actttttcgt caaaaaattc
     9061 tttccaggtc accatatgtg tagtgaaaag gtagggcgtt attacgcgaa acaccgggag
     9121 atcgagggcg cctatcactg tgaaaaaaac aatgagactc atagtggcaa cgatagggcc
     9181 gatggaattt tctgcaaata ccgaaagaaa aaaaccaacg gcagccacgg tgaccagcgc
     9241 cgcgaatgca tagcaaaacg caaggcagta ccgccaaaat acatcgtctt gttttatcag
     9301 cacgatgtac tcggttttca tcagaaacag gtcatcagtt ccaaaaagga acatgcttaa
     9361 aagcaatgcg aggatcgcaa cccagatgag caacaataaa gtgtaaatgc aagtggcgaa
     9421 aaattttgca aataagatct gcgttcggct gtacggtttt gcaaacatca gccgaagcgt
     9481 gcccatgttt gcttcaccgg agatcatgtc cgcagatatt aaagtgacga gcaatggtac
     9541 atgcaccaac attaactgca ggatgatata acataccatg tagccattaa ttagtttgcc
     9601 ctgcacatcg aaaccgccaa gacttcgcaa cataaaatcg gcatattgct gtccatccac
     9661 cttcaggcca aactgcacca taaatatcaa ggcgccgatc gccccaaaag cgatgtacgt
     9721 tcgcggccgc ttgaaaattt tgtaaacttc aatttgcaaa agttgccaca tgttgtgtac
     9781 cgcttgttac ctgtaaaaaa taatcttcga gtgaatgccg tgactggagg gaaatgatct
     9841 ttatattttg ctgcacaagc cagatatgaa aatccgggat gtcgttacga tgcattttca
     9901 gcaacaaaac attgttacgc tccggctgca ggcacttttg ccactggcta ttttccaata
     9961 atgtcagcgc acttttatta tcgagtgtat cgagttccaa aagcatccgt gatggatcaa
    10021 acaattcggt cgttgttcct tcaacaagtt tcctaccacg atcgatgatc aacaaccgcg
    10081 ttgctatttg ctccatttca ttgagtaaat gggaagacac caccaccgtc ttttttaagt
    10141 cgcggctcag gtgcaatatc aggttgcgta tatcagcgat tccctgcggg tctaaaccat
    10201 ttgtcggttc atcgagaatg ataagttgcg gatcatgaat taaagcaatg gcgatgccaa
    10261 gccgctgttt cattccctgg ctgtaagttt ttaccttgtc atgcgcacgg tctgccaaac
    10321 ctaccatgtc cagttggtgc atcagctctt tctccgccgg gtcaacaccg ctcatacgtg
    10381 caaacaaccg caggttatga tacgcggata agaatttata cacgtcaggt ttctcgatca
    10441 ctgcgccgat gcggcgtaag atctgtttcc ggtgcgcatg cagcttcatt ccaaacaatt
    10501 ctatttctcc ctttgtaggt tgcacgagtg taagcaacat acggatcgtt gtcgacttcc
    10561 cggcaccatt ctgaccgagg aaaccatata catcaccctg ctgcactgtg aaagacaact
    10621 catcaacagc tttgatattc cgataatgtt tcgagagatt cctcgtttga acaacaggct
    10681 gcatccgctc aaagatagat gcgtgaaaga aaaataagta accggg
//
LOCUS       DASQJI010000160         7979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1242635,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000160 DASQJI010000000
VERSION     DASQJI010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7979
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242635"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VEV83_04910"
     CDS             <1..440
                     /locus_tag="VEV83_04910"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44482.1"
                     /translation="STGWDFSAAQAGPAYGTTVKTKRRSGITAFGYFTVLSTATPTLQ
                     GSITTANSENRMQQVTTGVRILVYPTIVQRSVNISVSKAAEDTETMNVTIMNAAGKTV
                     LRKEKINFQSQQLSLPHLPSGAYIMLIQYGGNSHNQKIIVSGQ"
     gene            500..2650
                     /locus_tag="VEV83_04915"
     CDS             500..2650
                     /locus_tag="VEV83_04915"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK44483.1"
                     /translation="MKTSTQNFFVLLISLFFIDIDVKAQTNIFPSTGAAGIGTLTPNT
                     SASLDITSTSKGILIPRMTQAQRNAIVSPATGLMIFQTNNTPGFYFYNGTAWTPISTK
                     GVNTTLSNLKTPTAVNQSLLPGTTNSIDLGSSSMMWRNAYLSGNVGIGTTVPAAKLDV
                     NGDALINGITVGLGTGNLPYNVSVGRQALYNNTIGNSNTANGYRALYTNTAGSGNTAN
                     GETSLYSNTTGAANTANGYETLYFNTDGFGNTANGYNALFSNTSGYSNVAIGADALYS
                     NTTQSNLVAVGDSALLRNTTGLGNTAIGSKSLYANTGGGFNTASGYQALGHNTTGGIN
                     TASGFQALHYNTTGNDNTADGYGALFYNNTGHWNTANGVTALYGNTTGSQNTASGYHT
                     LTSNITGSGNTALGAYADVSIDNLANATAIGYNAIVSASNKVRIGNSAITLVESNAGW
                     WTLSDGRFKNNIKEDVKGLEFIKLLRPLTYNFDANKFDEFLMQNYPDSLKEKRFKQID
                     KTSAAKASAIKESGFIAQEVAEAVKKSGYDFNGVHAPENPTDNWSLSYEKLVVPLVKA
                     VQELSKSNDDLILKMSQFENLKIENAEQGKKLNDLQKQIDELRAMMTTNHASAGGNLS
                     TVNSQQSSSLSQNVPNPFNHTTTINYNLPQQYSSAKIIVIDELGKTIQNINLSGHGKG
                     NVNFSSRLTAGASYQYSLYVDGKLIDTKQMILTR"
     gene            3400..3561
                     /locus_tag="VEV83_04920"
     CDS             3400..3561
                     /locus_tag="VEV83_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44484.1"
                     /translation="MKFELSEHNDARNKTHNNKVAELSLMSMSSLQQLLQPLSQQFYR
                     WQSLTTVET"
     gene            3654..5234
                     /locus_tag="VEV83_04925"
     CDS             3654..5234
                     /locus_tag="VEV83_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44485.1"
                     /translation="MRKMFTLTIAVSCATLIVTNCVAQNVGINTTNPQATLDVKGGQR
                     VGGASHFTTYDSATGKIVWKNSNLFVNSAQYLMKHSASSEGLYYGASQLEYRYSDGTP
                     RFYTNWATGNGYFYGNLGIGDAAPNFPLSFANAAGDKISLWTNGSASYGFGLQSYLLQ
                     IHTDISDADIAFGSGSSASFSETMRVKGNGNVGIGTSAPGTKLHVFNGSSGYVGGYFP
                     GILIEGSGNTYANIITPNGNESALLFGNPSNIAAGGIVYNNASDPNGLQFRTNGNATR
                     MVIDQNGNVGIGWTSPNTPLTFPPYVGQKITLYPGATGNVGFAVQANLLQIYSDNPFA
                     DIAFGYDQTGTGLTEKFRFKANGAFAVNGNTGTSGQVLKSGGSGSSPTWGTLSSFLFD
                     NTSQIEQTNEVKATTNGNIALPGMRKTDYTITVTTNAKLIISTSVHGVTTSCAGCSAT
                     NFWVVTSIYKNGNPVAYAKVDADGSCGNGAYGSLTTGLTMIDVEPGTYTFETSAGVHN
                     GPDISVRHGRLFVVLVPQ"
     gene            5327..6610
                     /locus_tag="VEV83_04930"
     CDS             5327..6610
                     /locus_tag="VEV83_04930"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44486.1"
                     /translation="MKNYIRIIVFCSPLLSSAGSIAQFTNKGAQITIKSGAILYSKQG
                     FQNSVGGIVTNNGSIVSDSFITNNTGCTFAGNGIYKLQGNWKNSGTYTAGKSRLIFFG
                     KGNSDITSGGASVYDLELSKNSNGILNMLDALKVLDTIQFSSSKNWVQLNKTTLTLDS
                     NCKITGYDETKYFITNDSGFLKKINVGNKRFTFPVGFNKSTYNPLSITESGSADNYSV
                     RCLQHALLNGGTGNAITHGGIDVSWLVKEGVAGGMNAILEAQWYPANGDQLTGFDSSK
                     CMVVRYTGTAWDYNAATAGLASGTTVRTRKRTGVTAVGYFTVLSTANPTLQEIVNAVN
                     SENISAVNISDARISVYPTIVKNSINVSVIQTHHDIETMNMTLADASGKTVLQKQKMS
                     FQSQQLWLPNLTPGIYFILIEYGPNTYKQKIIVSE"
     gene            6664..6867
                     /locus_tag="VEV83_04935"
     CDS             6664..6867
                     /locus_tag="VEV83_04935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44487.1"
                     /translation="MQEIIQSLQQKLGLDAGKAQTAVETVVNFIKSKLPESMHQPIDS
                     AISGGNIQDTLKGAAGNLGGMLK"
     gene            complement(6997..7386)
                     /locus_tag="VEV83_04940"
     CDS             complement(6997..7386)
                     /locus_tag="VEV83_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HYK44488.1"
                     /translation="MNKEVEEYNNAQSAGDKQICNLLSAEISRNLPEAENKIWHAHPV
                     WFLHENPIVGYSKLKDCIRLLFWSGRSFDEDALQNEGTFKAAEIRYTSASQINKDDLK
                     RWLAKSRQIQWDYKNIVKRKGKLERLQ"
     gene            complement(7536..>7979)
                     /locus_tag="VEV83_04945"
     CDS             complement(7536..>7979)
                     /locus_tag="VEV83_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HYK44489.1"
                     /translation="NGIAQENTEEFLKTIDCYVMGSRTYEHAVELSASYGWAYGDTPT
                     VVLAHRKLPVKRNNIEFYAGDLNILVNQLKAKYNNVWVVGGAVVAKDFIRLQLVDEIR
                     LSILPIILGDGTLFFDQLQSEQALHLKDVIGYKSGMVELCYELKK"
BASE COUNT         2383 a         1771 c         1715 g         2110 t
ORIGIN      
        1 agagcacagg ctgggatttt agtgcggcgc aggcagggcc cgcatacggc acaactgtaa
       61 aaacaaagag acgaagcggt attactgcgt ttggttattt cacagttctt tcaactgcta
      121 ccccaacact gcaaggttca attacgacag ctaatagcga gaatcgtatg cagcaggtta
      181 caacgggcgt ccggatactt gtttacccaa ccatagtaca acgcagtgtc aacatatctg
      241 tatcgaaagc ggctgaagac actgagacta tgaatgtgac catcatgaat gcagccggaa
      301 aaactgtttt gcgaaaagag aaaataaatt ttcaatcgca acagttatcg ttaccgcatc
      361 tcccatcagg cgcatatata atgctcatcc agtatggagg caatagccat aaccaaaaaa
      421 taattgtcag cgggcaatga tgcgcagcgt taccgggttg atgccctata aattttttcg
      481 aaacaaaaaa ttatgtttca tgaaaacatc tacacaaaat ttttttgtcc tgttgatctc
      541 actgtttttt attgacattg acgtcaaagc acaaacaaat attttccctt ccacaggcgc
      601 tgcgggtatt gggacgctta ccccaaatac atctgcgtcg ctcgacatca cttcaacatc
      661 aaaaggcatt ttaattccac gcatgacgca agcacagcgc aacgctattg ttagccctgc
      721 aaccgggttg atgatcttcc aaactaacaa tacgcccggc ttttattttt acaacggaac
      781 tgcgtggacg cctatttcca caaagggagt caacacaact ctatctaatt tgaaaacccc
      841 gactgcagta aatcaaagcc tccttccggg tacaacgaat tcaattgatc tgggttcctc
      901 ctccatgatg tggagaaatg cttacttaag tggcaatgtc ggtatcggaa caactgtccc
      961 tgctgctaag ctggatgtta acggtgatgc gcttataaac ggcattacgg taggcctggg
     1021 taccgggaac ctaccctata atgtgtcggt aggtcgccag gcgctttata acaacacaat
     1081 cggcaactcc aataccgcga acggatatcg ggcgctttat acgaacaccg cagggtctgg
     1141 caatactgca aacggagaaa cttcgcttta ctcgaacaca acaggcgctg ctaatactgc
     1201 aaacggatac gagacgcttt attttaacac cgacggcttt ggcaatactg caaacggata
     1261 taatgctctt ttttcgaaca cctcaggata cagtaacgtt gcaatcggcg cagacgcact
     1321 ttattctaat acgacccaat cgaatcttgt agccgttggc gactcggcat tgcttcgtaa
     1381 cacaaccgga ttaggaaata ccgccattgg ttccaaatcg ctatatgcca acaccggcgg
     1441 aggcttcaat accgcaagcg gctatcaggc gcttggtcat aacactactg gaggtataaa
     1501 tacggcgagt ggatttcaag cgcttcatta caacaccaca ggaaacgata acacggctga
     1561 cggctatggg gcgctttttt acaacaacac agggcactgg aatactgcga atggcgtaac
     1621 ggccctgtat ggcaatacaa caggaagcca aaataccgca tccggttatc acacactaac
     1681 tagtaacatc acaggctctg gcaacactgc ccttggtgct tatgcagacg tctcaataga
     1741 caatttagca aacgcaactg cgattggata caatgccatt gttagtgcca gcaataaggt
     1801 gaggattgga aatagcgcca tcacgttagt tgaatcgaac gccggctggt ggactctctc
     1861 tgacggtcgt tttaagaaca acataaaaga agacgtaaag ggtctggaat ttataaaact
     1921 gctgcgccct cttacttaca atttcgatgc aaacaagttt gacgaatttc tgatgcagaa
     1981 ttatccggac agtcttaaag aaaagcggtt caaacaaatc gataaaacat ctgcagcaaa
     2041 agcctcagcc ataaaagaat ccggttttat agcacaggaa gtagccgagg ccgttaagaa
     2101 aagcggttat gattttaacg gcgttcacgc gcctgaaaat cctacagaca actggagtct
     2161 ttcttacgaa aaattagtcg tgcccctggt gaaagccgta caggaattat ccaaatctaa
     2221 tgatgatctc attttgaaaa tgtctcaatt tgaaaatctg aaaattgaga acgctgagca
     2281 gggtaagaaa cttaatgatc tccaaaaaca aattgatgaa ttaagagcga tgatgaccac
     2341 gaatcatgca tccgcaggtg gcaacctgtc aacggtcaac agtcaacagt catcttctct
     2401 ctctcaaaac gttccaaatc ccttcaatca cacaacaacc atcaactaca atttgccgca
     2461 acaatattct tcagcaaaaa ttattgtgat tgatgagctg ggaaaaacaa tacaaaacat
     2521 caatctttcc gggcacggca agggaaatgt aaatttttct tctcgcttaa ctgctggggc
     2581 ttcttatcaa tattcgttgt acgtggatgg aaagctgatc gatacgaagc aaatgatttt
     2641 gaccaggtaa aacaaatatt cacaaaatca tccgatgtgg tgatgtgcgc tggtttttgc
     2701 gatcgagcat cttaaatgga aaatagatta acgacgtgca gggccattgc tctcattggg
     2761 ccgacaaggg acacgaagat cacgacgaac cacaacgggt acaacgacgt ttaataagag
     2821 cgcacttttt tttcaatgct tgctcttatg cttcctgccc acaaataatt tttgataaga
     2881 ctagaaattt tcaatgcgtt gtgtgcttcg tgtctccttc gtgttcttgg cgtcccaaaa
     2941 aaactaataa ccaaaatcca aaaatcatat ttcattttca tcgaaagcat ttttctgact
     3001 taactgctct tcaaaaaaca aatttgtcat gaaaaggata tttacacttg tgattcgcct
     3061 ggcgtttttc gaactaacgt taaaatgacg gcaaagtagt ttagaaaata caacgcgatc
     3121 gtcatttcga acgagcaagt gcacattgtt ttgtgtctgt tagatttact tgcgaatgag
     3181 aaatctcgtt cagaatgtgt tcagatttct cctaacgtcg aaatgacggc atagtacggt
     3241 ggagaaatct tactgccaac catcttgaag aaggacaaat ttatcaaatc ttcaactctc
     3301 cgaggagagt cttccaacca gaaatcccgc gtttagggga tgtttagtgg ttgaatatag
     3361 tctacatttg tttacgttcc ttcagtatga gttgtcttca tgaaatttga gctgtcagaa
     3421 cacaacgatg cgcgcaacaa aacacataat aataaggttg ctgaattatc attgatgagc
     3481 atgagttcct tacaacaatt attgcaacca ttatcgcaac agttttatcg ctggcaatca
     3541 cttactactg tcgaaacgta acgcatcgcg cagtactgca cgatcattaa cacttcaacc
     3601 aaagtaagcc ctgagtctta cagccctgtt gttcttaaca ttaaaattct tttatgagaa
     3661 agatgtttac actcacgatc gccgtttcgt gtgctacatt gatcgtcaca aattgtgtgg
     3721 cacaaaatgt tggcatcaat acaacaaacc cgcaggctac gcttgatgtt aaaggtggcc
     3781 agcgtgttgg aggcgcaagc catttcacta cgtacgattc tgctacagga aaaatcgttt
     3841 ggaagaattc caatctattt gtcaactcgg cgcaatatct tatgaagcat tcggcctctt
     3901 cagaaggcct gtattatggc gcttctcaac tcgaatatcg ctactccgat ggcactccgc
     3961 gattctatac aaattgggca accggcaatg gatactttta tggaaacctt gggatcggag
     4021 atgcggcacc caactttcca ttgtcattcg cgaatgcagc cggagataaa atttcgttgt
     4081 ggacgaatgg cagtgcaagc tatggattcg gattgcaaag ctacctgctc caaattcaca
     4141 cggacatatc ggatgctgac atagcgtttg gctctggcag tagtgcaagt ttttctgaaa
     4201 caatgcgcgt aaagggaaac ggaaatgtgg gcataggtac aagtgctccc ggtacaaagc
     4261 tgcatgtttt caatggctca tccgggtatg tcggcggtta ttttccggga atacttattg
     4321 aaggcagtgg caacacctac gcgaatatta ttacacccaa cggaaatgaa agcgcattgc
     4381 tgtttggcaa tccttcaaac attgcggcag gtggcatcgt ttataacaat gcgtctgatc
     4441 caaacggtct gcaattccgc accaacggaa acgcaacccg gatggtaata gatcaaaacg
     4501 ggaacgtggg cattggctgg accagtccaa atactccgct aacttttccc ccttatgtag
     4561 gccaaaaaat tacgttatat ccgggcgcca caggaaatgt gggatttgcc gttcaggcaa
     4621 acttactgca gatctattcc gacaatccgt ttgcagacat cgcgtttggt tacgaccaga
     4681 cgggcacagg gctcacggag aaattccgtt ttaaggcgaa cggagccttt gcagtaaatg
     4741 gtaataccgg cacttccggc caagtattga agtccggtgg ttccggcagt tcaccaacat
     4801 ggggcacctt gtccagtttt ttattcgata acacctcgca gatagagcag acaaatgagg
     4861 tgaaggcgac cacgaatggg aacattgctt tgccgggaat gagaaagacc gattatacga
     4921 taacagtaac tacaaatgca aagctgataa ttagtacatc ggttcacggt gtaacgactt
     4981 cgtgtgctgg ctgtagtgct acaaattttt gggtagtcac ttctatttac aaaaacggaa
     5041 atccggttgc ctacgcgaag gtcgatgcag atggaagctg cggtaacggc gcttatggat
     5101 cattaacaac cggactcaca atgatcgatg tcgaaccagg cacttacact ttcgaaacca
     5161 gtgcgggcgt tcacaatggg ccggatattt cagtgaggca tggccggcta ttcgtcgtgc
     5221 ttgttcctca atgagaaagt ttgaaacgcg ctaacgcaga acttatcccg ttatggccag
     5281 aataagacta gcgctgtttt gaatagaaac attaaaaaag caagacatga aaaattatat
     5341 acgcataata gttttttgca gcccgcttct ttcttccgcc ggtagtattg cgcagtttac
     5401 caacaaaggc gcacagatca cgataaaaag cggtgcaatt ttatacagta aacaaggttt
     5461 tcaaaattct gttggaggca ttgtaacgaa caatggctcc attgtttcgg attcgttcat
     5521 cactaacaac accgggtgca cgttcgcagg gaatggcatt tataagttac agggcaattg
     5581 gaaaaattca ggcacctaca cggcgggcaa atcgcggctt atattttttg gaaaaggtaa
     5641 ttctgatatc acgtccggcg gcgcgagtgt atacgatctg gagctcagta aaaattctaa
     5701 tgggatccta aacatgctgg acgcactgaa ggttttggac acgatccaat tttcgtcctc
     5761 gaaaaactgg gtgcagctaa acaagaccac acttacgctt gattcaaact gtaaaataac
     5821 cgggtatgat gagacaaaat attttatcac gaatgactcc ggcttcctca agaaaataaa
     5881 tgtcggcaac aaaagattca cttttcctgt tggctttaat aagtccacgt acaacccact
     5941 ttcaataact gaatcaggaa gcgcagataa ttattctgtg cgctgcctgc agcatgcatt
     6001 gttaaatggt ggtacgggaa atgcgataac acatggagga attgatgtga gctggcttgt
     6061 gaaggaaggc gttgctggcg gtatgaatgc aattctcgaa gcgcagtggt acccggcaaa
     6121 cggcgaccaa ttgacaggat ttgattcttc aaaatgtatg gtagtaagat ataccggtac
     6181 ggcgtgggat tataatgcag caacagcggg actcgcctcg ggcactacgg taagaacaag
     6241 gaagagaact ggtgttactg ccgttggata cttcacagtg ctttcaactg cgaaccctac
     6301 gttgcaagag attgtcaacg cggttaacag cgaaaacatt tcagcagtaa acataagcga
     6361 tgcgcgcata tcagtgtatc caacgatcgt aaaaaacagc atcaacgtat cggtaataca
     6421 aacccatcat gatattgaaa cgatgaacat gacccttgca gacgcttcag gaaagacagt
     6481 tttacaaaaa cagaaaatga gttttcagtc gcagcaactc tggttgccca acctcacacc
     6541 tggaatatat ttcatcctga tcgagtatgg gccgaacact tacaaacaaa aaataattgt
     6601 gagcgagtaa agactcgcat caaatttgca ttcatttcgt ggtcatagct aaaagacatt
     6661 cttatgcaag aaatcattca gtctttacaa caaaaattag gtttggatgc cgggaaagca
     6721 caaacagctg ttgaaacagt cgtgaatttc ataaaatcaa aactgccgga atcaatgcat
     6781 cagccgattg attctgcgat aagcggcgga aacatccagg atacactcaa aggcgctgca
     6841 ggaaatttgg gcggaatgct taaatgattt ttaatgcatg cagggttggg tttttgttat
     6901 agagagctgg caggattgaa cagtgatgta ttgagaaccg tcttttgatt gtgctgattt
     6961 aaaaatattc agtattcaat tctcaatttt caatgatcat tgcaatcgct ctaacttgcc
     7021 tttgcgttta acgatgttct tgtaatccca ttgaatttgg cgagactttg caagccagcg
     7081 tttcaggtca tccttattta tttggcttgc ggaggtgtaa cggatctcag ccgccttaaa
     7141 agtgccttcg ttttgtaaag catcctcatc aaacgatcgt ccgctccaaa acagtaaccg
     7201 gatacaatct ttcaatttgc tgtatccaac aataggattt tcatgcagaa accaaaccgg
     7261 gtgagcgtgc cagattttgt tttctgcctc gggcaaattc cggctgatct cggctgacag
     7321 caggttgcat atttgtttat caccagccga ttgagcatta ttatattcct ccacctcttt
     7381 attcattttg tcctggtttt tattcgcgtg gcgtctaaga actgcatgaa gttaacttaa
     7441 ttgaacgatc atgtgtgacg aacgccgcaa acgttcctct ctgaacgcgt gaaaacaaaa
     7501 tcatcaatca gtcgatagtg aattctgacg caggtttatt tttttagttc ataacacaac
     7561 tcaaccattc cacttttgta tcctatcaca tctttcaggt gcaatgcttg ttcgctttgc
     7621 aactggtcga aaaataatgt tccgtcaccc agtatgatag gcaaaattga taatcttatt
     7681 tcgtcaacga gttgtaaccg aataaaatcc ttcgccacga ctgccccgcc aacaacccaa
     7741 acattgttgt atttagcctt tagttgattg acaagtatgt tcaagtcgcc ggcataaaat
     7801 tcaatgttgt ttctcttaac cggcaatttc ctgtgagcaa gtacaacagt cggcgtgtct
     7861 ccgtaagccc acccataaga tgctgaaagt tccacagcgt gctcgtaagt ccgcgaaccc
     7921 attacatagc agtcaatagt tttcaggaac tcctcggtgt tttcctgggc aattccatt
//
LOCUS       DASQJI010000161        19017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2164529,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000161 DASQJI010000000
VERSION     DASQJI010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 19017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19017
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2164529"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1220)
                     /locus_tag="VEV83_04950"
     CDS             complement(<1..1220)
                     /locus_tag="VEV83_04950"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HYK44490.1"
                     /translation="MKILLQQVSIADPSSPHNGQIKDILIVDGVIEKIHDHIDSEDTT
                     IFQQPHVQVSPGWVDIFTHASDPGFEFKETLETCAAAAAAGGYTRIFTIPNTYPFVDN
                     KAQVEYITQKSRSLPVYAQPLGGISKKGEGKELAEMYDMRQCGAAAFTDGLNPLQSAG
                     LLVKALQYVKTFDGVVIQLPQDKSINAHGLMNEGITSTRLGLPGMPAIAEELMVARDI
                     ETAQYTDSELHFTGISTAKSLGCIKEARMRGLKITCSVTPYHLFFCDEDLHAYDVNLK
                     VNPPLRSRTDMVVLRKAVEEGDIDCIASHHIPQDWDNKTCEFEYAKFGMIGLQTCYAA
                     VTTACPNLTSEQIVKLFSTNARMIFGLDSATIKEGNAAELTLFNNEQHTFKKEEIKSR
                     SQNSAFINLSLTGSV"
     gene            1559..1632
                     /locus_tag="VEV83_04955"
     tRNA            1559..1632
                     /locus_tag="VEV83_04955"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1593..1595,aa:Pro,seq:ggg)
     gene            1761..2636
                     /locus_tag="VEV83_04960"
     CDS             1761..2636
                     /locus_tag="VEV83_04960"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6089 family protein"
                     /protein_id="HYK44491.1"
                     /translation="MVKKKHWIPLLIIFSILFQNTLPAQQLSLQLSAGLMNYGGDLQD
                     KTYSFTLTHPTVGASLAYQVDHFVLRTGLVFGRVSADDKQSTLYKSRNLNFTSNITEF
                     SFCLQYDFLLLNETRKFTPYVFAGIALFHFNPYTYNGNTKVYLQPLGTEGQGLALYPD
                     RKFYSLTQIEDPFGIGIKYKVSPRIMLGLEFNSRLLFTDYLDDVSKEYPDQTELFKAR
                     GQLPVDLSFRGDEIDPTLPFPSDKIRGNPGQNDNFYTSMFTFTYTFPEHPLFGGNSGG
                     SRHGGKSIACPKKVH"
     gene            2733..4571
                     /locus_tag="VEV83_04965"
     CDS             2733..4571
                     /locus_tag="VEV83_04965"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HYK44492.1"
                     /translation="MTYQSLEECLLHLESNGHLVRIKETVDPNLEMAAIHLRVHEAHG
                     PALLFEQVKGSAYRAASNIFGTLERSKFIFQNELKKVRGAIQLREDPLSLLRKPLISL
                     RTGRDLFSALPLKDPSDKPVLANQIRITELPLIKHWPMDGGAFVTLPQVYTEDVEQPG
                     IKHSNLGMYRIQLTGNDYKLNEEVGLHYQIHRGIGVHQTKANAAGKPLRVSVFVGGPP
                     AHSLAAVMPLPEGLSEIMFAGLLAGRRFRYCYKDDFCISTDADFVITGNVYEKDNKRE
                     GPFGDHLGYYSLKHPFPVMHVHQVYAKKNAIWPFTVVGRPPQEDTAFGALIHELTGDV
                     IQKEIPGLKELNAVDAAGVHPLLLAIGSERYTPFNQTKQPAEILTIANHILGTGQLSL
                     AKFLFISADDTNKISTKNIEQFFAHILKRIDLARDIHFYTNTTIDTLDYSGTELNSGS
                     KVVLAAYGQEMRDLCTDVPPVLSQLQFFERPTLALPGIVCLQAKKFLSYNDALKEINS
                     LHEQLLGRTGELTTCPMIVISDDSTFTAQSLRNFLWVTFTRCNPSHDIHGLNSFYENK
                     HWGCTNLLFDARIKPHHAPVLEKDPAVEKKIDRLFDKGGSLYGVLK"
     gene            complement(4678..5094)
                     /locus_tag="VEV83_04970"
     CDS             complement(4678..5094)
                     /locus_tag="VEV83_04970"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HYK44493.1"
                     /translation="MSNLTFTMIKPDATSKGHTGAILDRILKAGFKVKAMKWTWLSKE
                     KAGAFYAIHKERPFYSELVAFMSSGPIVAAILEKENAVAEFRKLIGATNPAQADEGTI
                     RKDFAASVGENAVHGSDSDENAIIESNFFFSELERF"
     gene            5225..6232
                     /locus_tag="VEV83_04975"
     CDS             5225..6232
                     /locus_tag="VEV83_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HYK44494.1"
                     /translation="MQPIKNLYPLLDRQRKIVITMHQKPDGDAMGAALALFHFLKSLD
                     HAVCVISPTNWARFLNWMPGCKEVIDFEMHTDKCREIIEGAELLFCLDFNSMHRAKRM
                     ETLLLGARCVKVLIDHHEQPTEEHFDYGVSDAARSSTCEMVYDFIVGSGRADKLDLDM
                     AACIYTGIMTDTGSFRFSITTAHTHEVVMHLKQLGLQHSIIHENIYDNFLENRLRFTG
                     NALLHHLHVFYEYNTALMAIPKRDILRYEIQTGDTEGLVNYMLTIEGIKLGALLIDRI
                     EERKWSFRSKGDFDVNEFARAHFEGGGHKNAAGGRSSDSLEANIQRFKEIIKQYELQL
                     Q"
     gene            6284..7222
                     /locus_tag="VEV83_04980"
     CDS             6284..7222
                     /locus_tag="VEV83_04980"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HYK44495.1"
                     /translation="MKTTIAALFALGLVACNINYEKTPSGLAYKIFHGKGDTIKPKAG
                     QFAKFNIEYTLVDRDSVLQTTYGRIPVYNQVDTGKRADYSYMEVLGLMNEGDSAEISI
                     SIDSLKSKGIIPDYNPLFVKGQLIKCRLHLQKVFKDEKQMLDDYDKSMEAEKNSEVKS
                     LEGYMAKNNLKGIKTKNGAYVVVENPGDQSQKADSGKMASVMYRGYLASNGKVFDTNM
                     DSSKGHTDPIPVPVGNLRSGIIQGWHEGLPYFGKGGKGKILVPAMLAYGPQPQGADIP
                     AFSNLVFDIEVIDVRDMPKAPAQEGHDSTGHAPEGD"
     gene            complement(7299..8297)
                     /locus_tag="VEV83_04985"
     CDS             complement(7299..8297)
                     /locus_tag="VEV83_04985"
                     /inference="COORDINATES: protein motif:HMM:NF025749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4421 family protein"
                     /protein_id="HYK44496.1"
                     /translation="MKHGLPLVLVLTLVLSHESYAQKIKHTHDTSYYAVYPGSLVLRL
                     YYTEKYSGVEFPSADNSTEFKYKPNTNQGIGLGFTYNYFSLNLAFGPSFMNNNEDKGK
                     SKGFGLQLHAYPHKWALDIVTGFNQGCYIDPQGYATAASNTYYYRPDVDLNFAGVALY
                     RVPNGDKFSYHAAMTQNEWQKKSCGSLLYGGQAYYTKLKGDSNLVPKEVASSFNESIA
                     TDVHVFGIGAGVGYAYTLVVAKRLFFMGSLVVNANLNFSGESGDTISVNRTTLNPGSI
                     FKASAGYNGQKWNISANWTGLSLSFPSASAEENYNVPAGNFRFIIARRLMVGKHGG"
     gene            complement(8416..8934)
                     /locus_tag="VEV83_04990"
     CDS             complement(8416..8934)
                     /locus_tag="VEV83_04990"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYK44497.1"
                     /translation="MSEILQHGRHEKTGNRKPNKKFIRVDLTPMVDLGFLLISFFVFT
                     TSIAHPTAMKLVLPADSDSLDSGEVPASKTLNLLLGGNNKIYAYSGNSLDAVQDLGAD
                     PRVLRSALMQKKNEIRIRYGSDSGIIVLIKPTPHATYSNVVDALDEMQICAVKTYLLM
                     DPDKTELEKIHE"
     gene            complement(8980..11487)
                     /locus_tag="VEV83_04995"
     CDS             complement(8980..11487)
                     /locus_tag="VEV83_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HYK44498.1"
                     /translation="MDIKDTKGYKIIHQWLASKKLQPFRFQEDAWQHIIYRGSGLVNA
                     PTGCGKTFSVFLGSVIQFINENQKSWQTKKNSGLQLLWITPLRALAKDIGRAMEDVIR
                     ELGMKWQIGIRNGDTDITERQRQTRQMPEVLIITPESLMLLLAQKNYPHFFSSLQIIA
                     VDEWHELLGSKRGVQVELALSRLVNVNCELPTSNIKPQTSNFKPSIWGISATIGNLEE
                     AKEVLLSSLVDGLDKAVIVKAQMDKRIEVFSIIPEEIEKYPWSGHLGIKLADKIVPII
                     EQSNTTLIFINTRSMSEMWYQTLLTIAPQFAGVIALHHGSIEHELRTWVEEALHAQKL
                     KAVVCTASLDLGVDFRPVDTVIQVGSPKGVARFLQRAGRSGHGPGEVSKVYFLPTHSI
                     ELVEAAALKNAIDEGIIESRQPMLLCFDVLMQYLCTLAIGEGFEQQQIFEEVKSTYCY
                     RDLAREEWKELLQQITGGGKALEHYDEYKKVELDEKGLYRIRNRRIAMRHRMQIGTIV
                     SDAMMKVRMMNGTYLGMIEEYFLSRLEPGDAFTFAGRNLELVTIKEMTAHVRPSKTKK
                     SIIPSWMGGRMSLTANLGMVLRRTFNKALTSAVIELEALRPLFKLQQELSHIPQSDEL
                     LIEQIEDKDGFHLLVYPFEGRQIHEAMSSILAYRISQFTPITFSIAMNDYGFELLSDQ
                     PVPVDDTNVRELFTTENLINDIQRSVNSVEMGARKFRDIAVIGGLIFTGYPGEPKKAK
                     HLQASASLLFKVFSEYDPKNILLRQAYHEVFEQQMEEVRLRNALERIQKNDIILKFPR
                     RLTPLSFPIVVDGLSRYNLSSEKFEDRVKKMQKQLEK"
     gene            complement(11573..12445)
                     /locus_tag="VEV83_05000"
     CDS             complement(11573..12445)
                     /locus_tag="VEV83_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase"
                     /protein_id="HYK44499.1"
                     /translation="MGKKIVGLFTMMSNGRKIKVAILDLYEGAPNQGMRCLHQIINQW
                     GEDNKFPVQLDVFEVRSKVELPDLSYDVFISSGGPGSPIASEGSEWDRKYMNWISHVE
                     KWNDDFANYPKKHVFFICHSFQLACRYFKIGKVCERQSTAFGIFPVHMTRAGKNEVVF
                     EQMKDPFYAVDSRDYQVIQPNHNRIKELGAEILAIEKERPHVAHFERAIMAVRFNDYF
                     IGTQVHPEADAVGMSMYLQREDKKTTVIDNHGEDKWRSMLEHLEDPDKIRWTYDHVLP
                     NFLNAAIEALVPHS"
     gene            complement(12519..12914)
                     /locus_tag="VEV83_05005"
     CDS             complement(12519..12914)
                     /locus_tag="VEV83_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYK44500.1"
                     /translation="MNFKIDTREKFTIITPVLDSFSDNLTADLSSIAHSYLEKKINVV
                     LNLKNVLSINEQAIQQIAAFQQQFYEENLSFVLCELQPAVEALVEQLELDDVMNITPS
                     ETEAWDIVQMEEIERELLDDEENSGEREH"
     gene            13006..15534
                     /locus_tag="VEV83_05010"
     CDS             13006..15534
                     /locus_tag="VEV83_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HYK44501.1"
                     /translation="MDNNFSAQVKEIISYSREEALRLGNDFIGTEHLLLGLIRDGENT
                     AIKVLKQLNVDLYELRKEVELAVKDKTGKNIANINSLPLTKQAEKVIRVTVLEAKALK
                     SPLVETEHLMLSILKNKENIATQILNQYDVDYDIFKNELGVVRSNEPRSEYTEENDDD
                     FEDERKQGYSQQKNKPAGTAKSKTPVLDNFGRDITKLAETGALDPIVGREKEIERVSQ
                     ILSRRKKNNPILIGEPGVGKTAIVEGLALRIVQRKVSRVLYDKRVISLDLAALVAGTK
                     YRGQFEERMKAIMNELEKNRDVILFIDEIHTIVGAGGASGSLDASNIFKPALSRGELQ
                     CIGASTLDEYRMYIEKDGALDRRFQKVMVDPPTVEETIQILNNIKPRYEDYHNVVYSD
                     DAIDACVKLSDRYMTDRLLPDKAIDVLDEVGARVHLKNINVPQNILDLEKQIEDIKLE
                     KNRVVKSQRFEEAAALRDTEKRLGEELDKAKSEWEEESKHKRYPIDEENIAEVVSMMT
                     GIPVKRMVQAESEKLRKMADDMASMVVGQQEAIQKVVKAIQRNRVGLKDPRKPVGSFI
                     FLGPTGVGKTELARALARYMFDSEDALIRIDMSEYMEKFTVSRLIGAPPGYVGYEEGG
                     QLTEKVRRKPYSVILLDEIEKAHPDIYNILLQVLDDGQLTDGLGRKIDFKNTLIIMTS
                     NIGVRQLKDFGEGVGFATAARVQSADENNKAVIEKALKRTFSPEFLNRIDDVVIFNSL
                     TKEHIFEIIDILMKGVFKRLTNMGFTLRITNDAKEFIAEKGYDIQFGARPLHRAIQKY
                     LEDPLAEEILSLNIKQGDVLIADLDKENSKIKFEFGKKEEEASV"
     gene            15839..16429
                     /locus_tag="VEV83_05015"
     CDS             15839..16429
                     /locus_tag="VEV83_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK44502.1"
                     /translation="MESLHLLIQGCISNDSKSQREFYEHYYGFALKTVFRYIYKYEKA
                     TDVVNDGFVKIFKSLPRFQINKGSKDTEKILMGWMKRILINTAIDELRRQQLIPEIGE
                     LPNYIWNEMDKGQNADQKILYKELICEIKRLPPSYRTVFNMFVIDGFSHQEIANMLGI
                     SEGTSKSALAKAKAQLKKFINNRFSETKHAILRRQF"
     gene            16404..17669
                     /locus_tag="VEV83_05020"
     CDS             16404..17669
                     /locus_tag="VEV83_05020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44503.1"
                     /translation="MQFSDDNFDDLVQKAAEEYPLRTDNSNWDVISVRLNTNGFHQKP
                     IQNRKWPYAAVLLLLLGGVLFTIVEYSGNSSTANQNAGVQKAADQKNTTNATTNRPEG
                     NKPDVAGVQISKANSVNPSVASEAVPGTRISKADPSGNGNVAYDFNSFVATPEQQTDA
                     VQSEALTETRVPQSNQSSLKPESANQDVQNSIASTTPVTTNANAATTKNEKASTTIPI
                     TLKTQPKTLYGRFFAGPQLSTVKFQQTDKVGYRIGVAVGYRLNNRFSLELGMQREKKN
                     FFSDGKYFDRSSLRLKESTAIESLHGSSVLTDIPISLRYNLNAKGKGQFFATAGLSGV
                     LITHTERYDYAVTKDGIPDNLSRSYSSAETTKYFSTANMSVGYETPLSKSLKLQVEPY
                     YQVHLQGFGIGDLPLNSFGINLGVVKGFK"
     gene            complement(17942..>19017)
                     /locus_tag="VEV83_05025"
     CDS             complement(17942..>19017)
                     /locus_tag="VEV83_05025"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HYK44504.1"
                     /translation="SVNTLTGGTEVNLYVPRILAPFNLNTSSAFVPQTRFRAQYELYN
                     KTTEYLLTSALGSVGYIWKTRIPVEHELTPFIINYVQPRNITDSFQKVLDSNIVLARS
                     IEQQFILGNSYNYNYNTLARANTDRNNFFFNGNVSLSGNLIGLITGANVKTGNQKEIF
                     GTPFNQYVRLEADARYYRRLGTQFRSFNARVLGGLGVAYGNTLNMPFIKAFFAGGVSD
                     QRGFRARTLGPGSYYAGNPRDTFVADQPGDIKLLTMLEYRDRLFSIVRWAAFLDAGNV
                     WTLREDTDRPGAKFTSQFLNQVAVDAGLGLRFDISFLVFRIDIAFPLRLPYVPPDGKT
                     IDIGNSDWRKNNIVWNLAIGYPF"
BASE COUNT         5441 a         4097 c         4256 g         5223 t
ORIGIN      
        1 acactgcctg ttaaactaag attgataaac gctgaatttt gcgatctgct tttgatctct
       61 tcctttttga aagtgtgttg ttcgttatta aacaatgtga gttctgcggc atttccttcc
      121 ttgatggttg cgctgtccaa accaaatatc atcctcgcat ttgttgagaa caattttaca
      181 atttgttcgg aagtaagatt cggacaggca gtcgttactg ctgcataaca ggtttgtagc
      241 ccgatcattc caaacttcgc atattcaaac tcacatgttt tgttgtccca atcctgcgga
      301 atgtgatgcg acgcgataca atcaatgtca ccttcctcca ctgcttttcg aagcacgacc
      361 atatcggttc gactgcgtag cgggggatta acttttaagt tcacatcata agcgtgtaga
      421 tcctcgtcgc aaaaaaataa gtgatagggt gtaacagaac aggtgatctt caatccccgc
      481 atccgtgctt cttttatgca tcccagcgat ttggcagtgc tgatgccggt aaaatgcagc
      541 tccgaatctg tgtattgtgc agtttcaata tcccttgcca ccatgagttc ctccgcgatc
      601 gccggcatgc cgggcaggcc aagtctcgtt gacgttattc cttcattcat caatccatgc
      661 gcattaatgc ttttatcctg cggcaattgg ataactacgc cgtcaaaagt ttttacgtac
      721 tgcagagcct tcaccagcaa acccgccgac tgcaatgggt tcaagccgtc ggtaaatgct
      781 gcggcgccgc actgccgcat atcatacatt tctgcaagct ctttgccttc tccttttttt
      841 gatatgcctc cgagcggttg tgcatacaca ggcaacgatc tggatttttg ggtgatgtac
      901 tcaacctgcg ctttattgtc gacaaatggg tatgtgttcg gaattgtaaa gatccgggtg
      961 taaccaccgg ccgcggctgc cgcggcgcat gtttcaagtg tttctttaaa ttcaaatccc
     1021 ggatcagatg cgtgcgtgaa aatatccacc caaccgggtg aaacttgtac atgcggctgc
     1081 tgaaatattg ttgtgtcttc actgtcgata tgatcgtgaa tcttttcaat aacgccgtca
     1141 acaattaaaa tgtctttgat ttgcccgtta tgcggagagg aaggatctgc aattgaaacc
     1201 tgttgcagta atatcttcat tgcagtatgc aaaatttgtc aaatataacc tgaattttat
     1261 aaaaaggctt ttacatttgc gcgtatcgcg acttcggttt caatgcaaaa acgaaaaatt
     1321 gcggtaaatg aatttttttc tttgaaattc ctgttgatgt aaaatatttt atttgcgtgt
     1381 cctttataga tttttagtgg tgctgcgcaa aaaagataaa ataaaacatt cgggcggtgt
     1441 cccgatcaat cgggatcaaa attgggagta acggacaata aaaatattcc ggtggtggcg
     1501 tcccgatcaa atcgggagta gcgaatttgc accacgaaaa aagataaata aaaatattcg
     1561 ggtggtggcg cagcccggta gcgcatttgc atggggtgca aggggtcgct ggttcgaatc
     1621 cagtccaccc gacctttcta aacctaattt caagaataca tacttgcacc gtctgccatc
     1681 tgcagacggt tttttataaa tacaactata gttggaataa ttttcgcttt taagcgttat
     1741 tcataaaaac agtcagataa atggtgaaga agaagcactg gataccttta ctgataattt
     1801 tttctattct ttttcaaaac accctgcccg cccagcaatt aagcttacag ttgtccgccg
     1861 gacttatgaa ttacggtgga gatctgcagg acaagaccta tagttttact ttaacgcatc
     1921 ctacggtcgg cgcttcactt gcctaccagg tggaccattt tgtccttcga acggggcttg
     1981 tatttggcag agtgagcgca gacgacaaac aaagcaccct gtacaagtcg cgcaatttga
     2041 acttcacatc aaatatcaca gaattcagct tttgcctgca gtacgacttt ttgctgctca
     2101 atgaaaccag gaagtttact ccttatgttt ttgccggcat cgcgctgttt cattttaacc
     2161 cgtatactta taacgggaat acgaaagttt atctgcaacc attgggaacc gaagggcagg
     2221 ggcttgcgct atatcccgac cggaaatttt attcactgac acaaatcgag gatccgtttg
     2281 gaatcggcat caaatacaaa gtgtcgccgc gcatcatgct tggacttgaa ttcaacagcc
     2341 gtcttttatt taccgattac ctcgatgatg taagcaagga atacccggat caaacggaat
     2401 tgttcaaagc gcgcggacaa cttcccgtgg acctttcatt cagaggagat gagatagatc
     2461 caacgctacc atttccatct gataagatcc gcggtaaccc tggccagaat gacaattttt
     2521 atacctctat gttcaccttt acttatactt ttcctgaaca tcccctgttc ggaggtaata
     2581 gcggcggcag caggcacggc ggtaaatcca tcgcgtgtcc aaaaaaagtt cactagttac
     2641 actaaccgcg ctcgtttatg gttctgcttt aaacatcaat ggacaattaa ccatcgattc
     2701 ataggtttgc atttgtcaaa ctggtttttc atatgacata tcaatcgctt gaagaatgtt
     2761 tattacatct tgaaagtaat gggcatttag tcaggattaa ggaaacggtc gacccgaacc
     2821 ttgaaatggc agcaattcat ttgcgtgttc acgaggccca cggacctgca ctattatttg
     2881 aacaggtaaa aggttcagcc tacagagcgg cgtcaaatat ctttggtaca ctcgaacgga
     2941 gcaagttcat atttcaaaac gagctaaaaa aagtgagagg cgcaattcag ttgcgcgaag
     3001 atcccctgtc tttgttgcga aagccgttaa tttctttgcg gaccggcaga gatctttttt
     3061 ctgcgctccc attgaaagac ccctcagaca aaccggtact ggcgaatcaa atcaggataa
     3121 ctgaattgcc tttaattaag cattggccga tggacggtgg tgcttttgtg acgttgccac
     3181 aggtctacac ggaggatgtg gaacagccag gcatcaaaca ttcaaacctg ggcatgtacc
     3241 gtattcaact gacggggaat gattataaat taaatgaaga agttgggctt cattaccaga
     3301 tccatcgtgg cattggcgtt catcaaacaa aggccaatgc tgcaggtaag ccattgcgcg
     3361 taagtgtttt cgtaggcggc ccgccggcac acagccttgc tgcggtaatg ccgttgcctg
     3421 aaggcttgag cgagatcatg tttgcgggcc tgctagcagg aagaaggttc cgatattgtt
     3481 ataaagatga tttctgcata agcacagatg ccgattttgt tatcacagga aatgtgtatg
     3541 aaaaggacaa caaacgcgaa ggaccgtttg gagatcattt gggctactac agtttgaaac
     3601 atccgtttcc agtgatgcac gttcatcaag tgtacgcgaa aaaaaatgct atctggccat
     3661 ttaccgtggt cggtcgaccg ccgcaggaag acaccgcgtt cggtgcgctg attcacgaac
     3721 tgacgggtga tgtgatacaa aaagaaattc ccggcctgaa agaattaaat gcagttgatg
     3781 ccgcaggcgt gcatccgtta ttgctcgcca tcggtagtga gagatacaca ccgttcaatc
     3841 aaacaaaaca gccggcagaa atacttacca ttgcaaatca tattttgggg accggccagc
     3901 ttagcctggc taaattctta tttattagtg ctgatgacac gaataagatc tcaacgaaaa
     3961 atattgaaca attcttcgcg cacatcttaa agaggatcga cctggccagg gatattcatt
     4021 tttatacaaa cactaccatc gatacgctgg attattccgg cacggagctc aattcaggca
     4081 gcaaagtcgt tcttgccgca tatggtcagg agatgagaga tctgtgcaca gatgtgccgc
     4141 cggtgctttc gcaattgcag tttttcgaac gtccgacact ggcattacca ggcattgtct
     4201 gtctccaggc aaaaaaattc ctgagttata atgacgcttt aaaagaaata aattctttgc
     4261 acgaacagtt actgggacgg acaggcgaat taacgacttg tcccatgatc gtgatctccg
     4321 acgattcaac attcacggcg caatcattac gaaattttct gtgggtgacg ttcacgcgct
     4381 gcaatccttc gcacgacatt catgggctga acagctttta tgaaaataag cattggggct
     4441 gcacaaacct gctttttgat gcgcggataa agccgcatca tgcacctgtt ttggaaaaag
     4501 atccggccgt agaaaagaag attgatagat tatttgataa aggaggcagt ttatacggtg
     4561 tcttaaaata aaattggggc tgacgaagaa tcgtcgcccc ttttttcaac cctaaaccct
     4621 taaaaaacga aggtagcagg aaaaaatcat gccacaaatt tttttattga actgatttta
     4681 aaagcgttcc aactcggaaa aaaagaagtt tgattcgatg attgcattct cgtcgctatc
     4741 actcccgtgc actgcattct cgcctacaga agctgcaaaa tcttttcgta tcgtgccttc
     4801 gtcagcctgt gccggattgg ttgctccgat cagttttctg aattcggcga ctgcattttc
     4861 tttttcaagg attgccgcca caattggtcc gctgctcatg aatgcaacca actctgaata
     4921 gaatggcctt tccttatgga tcgcataaaa agcaccggct ttttcttttg acaaccaggt
     4981 ccatttcatg gcctttactt taaagcccgc ttttaaaatg cggtccaata tagcgcccgt
     5041 atgtccctta gaggttgcat cgggctttat cattgtaaat gtaagattgc tcatatgtgt
     5101 ttataaaaat gagcgcaaat gtaagggttc atattttttt caaggcgatt tcagatcagc
     5161 ctcattctta aaaagcaaaa ttgatttgaa ggaatgcatt taaagccgca attttgccgc
     5221 ccttatgcag ccgataaaga atctttatcc cttattggac cggcagagaa agatagtaat
     5281 taccatgcat caaaaacccg acggggatgc aatgggcgct gcacttgctt tgtttcactt
     5341 tctgaaaagc ctggaccacg cggtgtgtgt tatctcacct accaattggg caaggtttct
     5401 caattggatg cccggctgca aagaggtgat cgattttgag atgcacacag acaaatgccg
     5461 ggagatcatt gaaggcgcgg aacttctttt ttgcctggat ttcaacagca tgcatcgtgc
     5521 aaaaagaatg gaaacgttgt tgctcggggc aagatgtgta aaggtgctca tcgatcatca
     5581 tgagcaaccc accgaagagc actttgatta cggcgtaagc gatgctgcga gaagctccac
     5641 gtgtgaaatg gtttatgatt ttattgtcgg atcaggtcgc gcagataagt tagacctgga
     5701 catggcagcc tgtatataca ccggtatcat gacagatacc ggatcattta gattctcgat
     5761 cacaacggcg catacgcacg aagtagtgat gcatttaaaa caactgggct tgcagcatag
     5821 tatcatccac gaaaacatct acgataactt tttggagaac cggttgcggt ttacaggtaa
     5881 tgcgcttttg catcatttgc atgtatttta tgaatacaac acggcgctca tggctattcc
     5941 aaagagggat atattgaggt atgaaattca aaccggcgac actgagggcc tcgtaaatta
     6001 tatgctcacg atcgaaggaa taaagctcgg cgctttgctg attgaccgga tagaagagcg
     6061 caagtggagt ttcaggagta agggagactt cgacgtaaat gaatttgcgc gcgctcattt
     6121 tgaaggcggc gggcacaaga atgctgcggg aggccggagc tcagacagcc tggaggcaaa
     6181 cattcaaaga tttaaagaga tcattaaaca atacgaattg caattacaat aaacgcgtta
     6241 aatcacaata aaggcaagca cgacttgcat aaacaaaaca aaaatgaaaa caacaatcgc
     6301 agcattattt gctttgggct tggttgcatg taatattaat tatgaaaaaa caccgtctgg
     6361 cctggcgtat aaaatttttc atgggaaagg ggacacaatt aaaccgaaag cgggccagtt
     6421 tgctaagttc aatatcgaat atactctggt tgacagggac tctgtgctgc aaacaactta
     6481 tggcagaatt ccggtttata accaggttga caccggcaag cgtgctgact attcgtatat
     6541 ggaagtattg ggtttgatga atgaaggtga cagcgctgaa ataagtatca gtatcgattc
     6601 tcttaaatca aaggggatca ttcccgacta taatccgctt ttcgtaaaag gccaattgat
     6661 aaaatgcagg ttgcaccttc aaaaagtatt taaagatgaa aagcagatgc ttgatgatta
     6721 cgataaatca atggaggctg aaaaaaattc ggaggtgaaa tctcttgagg gatatatggc
     6781 aaagaacaat ctcaaaggaa taaagacaaa gaatggagcg tatgttgttg ttgaaaatcc
     6841 gggtgatcag tctcaaaaag ccgactcagg aaaaatggcg agtgtaatgt atcgcggcta
     6901 cctggcatca aacggtaaag tgtttgacac gaacatggac agttccaaag gacatacaga
     6961 ccccataccc gttcctgtgg gaaatcttcg ctcaggcatt atccagggtt ggcatgaggg
     7021 cctgccgtat tttggaaaag gtggcaaggg caaaatactc gttccggcta tgctcgctta
     7081 tgggccacag ccgcagggtg ctgatatacc tgctttttcc aatctcgtct tcgatataga
     7141 agtgatcgat gtgcgggata tgcctaaagc gccagcacag gaagggcacg acagtacggg
     7201 ccatgcacct gaaggtgatt aactataaac aaaagatctt gtaacggcat gcaatggacc
     7261 cattggatgc cgttactttt ttaatgatat tcgccttctt agcctccgtg ttttccaacc
     7321 attagccttc gcgcgatgat aaatctgaaa tttcctgcag gcacgttata gttttcttcg
     7381 gccgatgcgc tcggaaacga tagcgaaagg cccgtccagt ttgcactgat gttccatttt
     7441 tgaccgttat agcccgccga agctttaaag atacttccag gatttaaggt tgttctgttt
     7501 acgctgatag tgtcaccgct ttcgccagaa aaattcaaat tagcatttac aaccaacgac
     7561 cccataaaaa aaagacgttt tgctacaacc agcgtatatg cgtaacccac gcccgcacct
     7621 attccgaata cgtgtacgtc cgttgcaata gactcattaa acgatgaagc aacttctttg
     7681 ggtacaaggt tgctatcccc tttgagcttg gtgtagtagg cctggccacc ataaagaagg
     7741 gaaccgcacg attttttctg ccattcattc tgcgtcatgg ctgcatgata agagaactta
     7801 tctccattcg gcacacgata aagggccacg ccagcaaaat tcagatcaac atcaggccgg
     7861 taataatacg tgttggaagc ggcagttgca taaccctgcg gatcaatata acacccctgg
     7921 ttaaaaccgg ttacaatgtc taacgcccat ttgtgcggat aggcgtgaag ttggagtcca
     7981 aagcctttcg atttgccttt gtcttcattg ttgttcataa acgagggacc aaaagcaaga
     8041 ttcagcgaaa aataattata ggtaaagccg agccctatgc cctggttagt attgggtttg
     8101 tatttgaatt cggttgaatt gtctgctgat ggaaattcta ccccggaata tttctctgtg
     8161 taatacaaac gcagaaccag cgaaccagga tatacggcat aataagaggt gtcatgagta
     8221 tgctttattt tttgcgcgta cgattcgtgc gaaagtacaa gagtcaagac caggaccagt
     8281 gggagaccat gtttcatgca tgcggttttt agaatgaagg cataaaatta atgcctcaaa
     8341 gatggcgaaa aattttactg ccattaaatt ttgcatgtaa tcaactcaat ttgtatacca
     8401 gcaaaaacga aactattatt catgaatttt ttctaactcg gttttgtcag ggtccatcaa
     8461 cagatacgtt ttaacagcgc agatctgcat ttcatcaagc gcgtcgacaa cattgctata
     8521 tgttgcatgt ggcgttggtt taatgagtac tataatgccc gaatcgctgc catagcgaat
     8581 cctgatttca ttttttttct gcatgagtgc agatcgcaga accctcggat cagctccgag
     8641 gtcttgtacc gcatccagcg agttgccact gtatgcgtag atcttattgt taccgccaag
     8701 caataaatta agcgttttgc tggccggcac ttcacccgaa tccaacgagt cgctgtcagc
     8761 aggtaataca agtttcatcg cagtgggatg agcaattgaa gtagtgaata caaaaaatga
     8821 gatcaacagg aaaccaaggt cgaccattgg tgtgagatcg actcttataa actttttatt
     8881 cggtttacga ttccccgttt tctcatgccg gccatgttgc aggatctcac tcataagttt
     8941 tttatttatg agatgaaata ttttagcgat tccacacatt catttttcca actgcttctg
     9001 cattttcttt acccggtcct caaatttctc ggaggaaaga ttataccggc tcagcccatc
     9061 aacaacgata gggaaggaga ggggtgttaa ccgacgagga aattttagaa tgatatcgtt
     9121 cttttgaatt cgttcaagcg cattgcgtag tcgcacttct tccatctgct gttcgaagac
     9181 ttcatgataa gcctgccgca acaaaatgtt tttgggatca tattcgctga agactttgaa
     9241 caacagagaa gccgaagcct gcaaatgttt cgccttcttt ggctcacctg gatagcctgt
     9301 aaatattaaa ccgccgatca ctgctatatc gcgaaatttt ctcgctccca tttctacaga
     9361 gttcacgcta cgctggatat cgtttattaa attttccgtt gtgaataact cccgaacatt
     9421 ggtatcgtca acgggcacag gctgatcact gagtaactcg aatccgtaat cattcattgc
     9481 aattgaaaaa gtgatcggcg taaattgact gatccggtaa gcaagaattg aactcatcgc
     9541 ttcatgaatc tgccttcctt caaaaggata tacaagtaga tgaaaaccgt ctttgtcttc
     9601 tatctgctcg atcagcaatt catcactttg cggaatatgc gacaattcct gttgcaattt
     9661 gaacaatggc cgtaatgctt ccaattcaat tacggcagac gtcaatgctt tgttgaatgt
     9721 tcgccgaaga accattccga ggtttgccgt aaggctcata cgtccgccca tccaacttgg
     9781 aatgattgat ttttttgttt tcgacggacg cacatgtgca gtcatttctt ttatcgtcac
     9841 caattccaaa tttctgccgg caaacgtaaa tgcgtcgccg ggctcaagtc gacttaagaa
     9901 atattcttct atcatgccga ggtacgttcc gttcatcatg cgaactttca tcattgcatc
     9961 gctcacgatg gttccgatct gcatgcggtg tctcatcgca attcgcctgt tcctgatccg
    10021 atatagaccc ttttcgtcca gttccacttt tttgtactca tcgtaatgtt ccaatgcttt
    10081 gccgccaccg gttatttgtt gcaataattc tttccattct tcacgagcga gatcgcggta
    10141 gcaatacgtg ctttttactt cttcaaaaat ttgctgctgc tcaaagcctt cgccaattgc
    10201 aagcgtgcag agatattgca tcagcacatc gaagcaaagc aacataggct ggcgactttc
    10261 gatgatccct tcatcgatcg cgttcttcaa ggcagcagct tccactaatt cgatcgaatg
    10321 tgttggaaga aagtaaactt tacttacctc tcccggaccg tgaccgctgc gtccggctcg
    10381 ttgcagaaaa cgcgcgacgc cttttgggga accaacttgg atcactgtat cgacgggccg
    10441 gaaatcaacg ccgaggtcaa ggcttgctgt gcaaaccact gcttttaatt tctgcgcatg
    10501 cagagcttct tccacccacg ttctcaactc atgttcaatg ctgccatgat gcaaagcgat
    10561 cacacccgca aattgtggtg caatggtcag aagagtttga taccacattt cactcatgct
    10621 tcgcgtattg atgaagatga gtgtggtatt actttgttct atgatgggaa cgattttatc
    10681 agcgagtttt attccaagat gtccggacca cgggtacttt tcgatctctt cgggaatgat
    10741 ggaaaagacc tcgatgcgtt tatccatttg cgctttcacg atcactgcct tatccaggcc
    10801 gtcgacaaga gagctgagca aaacctcttt cgcctcttcc aaatttccga tcgttgcact
    10861 tataccccag attgatggtt tgaagtttga agtttgtggt ttgatgttcg atgttggcaa
    10921 ttcacaattc acattcacta gcctgctcag cgccagctct acctgcacgc cgcgtttact
    10981 gccgagcagt tcatgccatt cgtcaactgc aattatttga agcgatgaaa agaaatgcgg
    11041 ataatttttt tgtgccagca atagcatcaa actttcggga gtgatgatga gcacttctgg
    11101 catttggcgc gtttgccgct gtcgctcggt gatgtcagta tcaccgtttc ggatcccgat
    11161 ctgccacttc atgccgagtt cgcgtatcac gtcctccatg gcccggccaa tatcttttgc
    11221 caatgctctt aatggagtta tccataacaa ctgcagaccg ctgttctttt tggtttgcca
    11281 gcttttttga ttttcattaa tgaactgaat aacgctgcca agaaaaaccg aaaaagtttt
    11341 tccgcaacct gttggtgcgt tcaccagccc gctgccgcgg taaataatat gctgccatgc
    11401 atcttcctgg aaccggaatg gctgcagctt tttggaagcc agccattgat gaatgatctt
    11461 atatcccttt gtgtctttaa tatccactgg cgctgaatta aagaccacaa agttgggtgg
    11521 cgcagtttaa gcgcgcaaaa ttcgtctgaa aattttggag gtatggaccg cactacgagt
    11581 gaggcactaa tgcttcgatt gcggcgttga gaaagtttgg gagtacatga tcgtacgtcc
    11641 aacgtatctt gtcgggatct tccaaatgtt cgagcatgct gcgccatttg tcttccccat
    11701 gattgtctat aactgttgtt ttcttgtctt cgcgttgcag atacatgctc atgccaacgg
    11761 cgtcggcttc cgggtgcacc tgcgttccaa taaaatagtc gttaaaccgg acagccataa
    11821 tagctcgttc gaagtgagcg acatgcggcc gctccttttc aatggccagt atttcggcgc
    11881 ccaactcttt aatgcggtta tgattgggtt gtattacctg gtaatcgcgg ctatcgaccg
    11941 catagaacgg atccttcatc tgttcaaaaa caacttcatt tttcccggcg cgggtcatgt
    12001 gcaccggaaa tattccgaaa gctgttgact gtcgttcgca cactttgccg atcttgaaat
    12061 acctgcacgc caactggaaa ctgtggcaaa taaaaaacac atgttttttc ggatagttgg
    12121 cgaaatcatc gttccacttt tcaacatggc tgatccaatt catgtatttc cggtcccact
    12181 cacttccttc ggaagctatc ggcgaccctg gtccgccgct cgaaatgaac acatcgtatg
    12241 aaaggtccgg caactcaact tttgaacgta cttcaaatac atccagttga acgggaaact
    12301 tgttatcctc accccattga ttaatgatct gatgtaaaca cctcatgccc tggttgggcg
    12361 ctccttcgta cagatccaga atcgcgactt tgatctttct tccattactc atcatggtaa
    12421 acaaacctac aatttttttg cccaaagcat tggttgcgac ttttcaacag ctgttgaata
    12481 gaattatgct tttaagacat gaattcggca aaaaaggttt aatgttcgcg ctctccggag
    12541 ttttcttcat catcgagcag ttcgcgttca atctcttcca tctgcacaat atcccacgct
    12601 tcggtttcac tcggggtgat gttcatcaca tcatccaatt cgagttgctc aaccagcgct
    12661 tcgactgcag gttgcaactc gcataagacg aatgagagat tttcttcgta aaattgctgt
    12721 tgaaaagcag ctatttgctg aattgcctgc tcattaatag aaagaacatt cttaagattc
    12781 agaacgacgt tgattttttt ttcgaggtac gaatgcgcaa tgctactgag atctgctgtt
    12841 aaattgtcag agaaagaatc cagaaccggc gttattatcg taaatttttc tctggtatca
    12901 attttgaaat tcatagtaac tattgttaaa tcattaacat catgtgtata atagatttat
    12961 cagggagctc aaaaatattt cttatacttg tacaaacaca attaaatgga taacaacttt
    13021 tctgcccagg taaaggaaat catatcgtat agcagggagg aggcattacg acttggaaat
    13081 gatttcatag gaacggaaca tttgttgctg ggattgataa gggatggtga gaacacggca
    13141 ataaaagttc ttaaacaact aaacgttgat ctctacgaat tacgcaaaga agtagaactt
    13201 gctgttaagg ataaaactgg aaagaatatt gcaaatatta atagcctgcc attaacaaag
    13261 caagcagaga aagtgatacg cgtaaccgtt ttggaagcaa aagcattaaa gagtccattg
    13321 gttgaaactg aacatttaat gctttcgatc ctgaagaata aagaaaacat cgctacacaa
    13381 attctaaatc agtacgacgt ggattatgac atttttaaaa acgaattagg tgttgtgcgc
    13441 agtaatgaac cccgcagcga atacaccgaa gagaatgacg acgattttga agacgaaaga
    13501 aagcaaggat attctcaaca aaaaaataaa ccggcgggca ctgcaaaaag taaaacgccc
    13561 gtgctggata atttcggtag agacattaca aaacttgccg agacgggtgc actagatccg
    13621 attgtggggc gtgaaaaaga gattgaaaga gtttcacaaa tattaagtcg cagaaaaaag
    13681 aacaacccga ttctgatcgg tgagccaggt gttggtaaga ccgctatcgt tgaaggctta
    13741 gcgttgcgca tagtacagag aaaagtgagc agagtgctgt atgataaacg cgtaatcagc
    13801 cttgaccttg ccgctcttgt cgcaggtaca aaatatcgtg gccagtttga agagcggatg
    13861 aaagcgatca tgaacgagct cgaaaagaat cgcgatgtga tcctcttcat cgatgaaata
    13921 catactatcg tcggcgccgg tggtgccagc ggctctctcg atgcgagcaa tatcttcaaa
    13981 ccggcgttat cgcgcggcga attgcagtgt attggcgcat ccacgctgga tgaatacagg
    14041 atgtatattg aaaaggatgg cgcactcgac cgcaggtttc aaaaagtgat ggtcgatcct
    14101 cctacggttg aagaaactat ccaaatatta aacaacatta aaccgagata cgaggattat
    14161 cacaatgtag tctacagtga tgatgctatt gatgcttgtg ttaaattaag cgaccgttat
    14221 atgaccgacc ggctgcttcc tgataaagca atcgatgtgt tggatgaggt gggagcaagg
    14281 gtccatttga agaacatcaa tgttccacaa aacattcttg acctggaaaa gcaaatagag
    14341 gacatcaagc ttgagaagaa ccgggtggtt aaaagccagc ggtttgaaga agcggctgct
    14401 ttgcgcgaca ctgaaaaacg tttgggcgaa gaacttgaca aagcaaaatc agaatgggaa
    14461 gaagaaagta agcataaacg ctatccgata gatgaagaaa atattgctga agtggtgagt
    14521 atgatgaccg gaataccggt taaaagaatg gttcaggctg aaagtgagaa actgaggaag
    14581 atggcagatg atatggccag catggtagtt ggtcagcagg aagcgataca gaaagtagtt
    14641 aaagcaattc agcgtaacag ggtaggttta aaagatccca gaaaacctgt gggaagtttt
    14701 atcttcctcg gtccgacggg cgttggtaaa acggaattgg ccagagcact tgcgagatac
    14761 atgttcgatt ctgaagatgc tttgatacgg atcgacatga gtgagtacat ggaaaagttc
    14821 accgttagcc gtttgatcgg tgcacctccg ggctatgttg gatatgaaga aggtggccaa
    14881 ttaactgaaa aggtccgtcg caagccgtac agcgtaatat tgctcgatga aattgaaaaa
    14941 gcacatcccg acatttataa tatcctgtta caggttctcg atgatggtca attgaccgat
    15001 ggtcttggaa gaaagataga cttcaagaac acgctgatca ttatgacatc aaatattggt
    15061 gttcggcagt tgaaagattt tggtgaagga gtcggatttg ctactgccgc tcgcgtgcaa
    15121 agtgcggatg agaataacaa agcagttatt gaaaaagcac tcaagcgcac gttctcaccg
    15181 gagtttttaa acaggataga tgacgtcgtt atctttaact cccttaccaa ggaacatatt
    15241 tttgagatca ttgatatcct gatgaaggga gtgttcaagc gcttgactaa tatgggcttc
    15301 acattgagga taacgaacga cgcaaaagag tttatcgctg aaaaagggta tgatattcag
    15361 tttggtgcaa ggcctttgca cagggcaatt caaaaatatc ttgaagatcc acttgcggaa
    15421 gaaatactta gcctcaacat aaaacagggt gatgtgctaa tcgcagacct cgataaagaa
    15481 aacagtaaaa taaaatttga atttggtaag aaagaagaag aagcgagtgt ttaatgtgca
    15541 ttccttaccg taagaaagct tgccgcttag gcaggctttt ttatttcttg tagagatcgg
    15601 tcggtttcgt ttacagaacg gcgcgccgga acataagcag gccaaatttc acttttagtt
    15661 tccgtaaata aactggtgcc aattgcgaaa atggtatatc tttcgcatac agaatttttc
    15721 taaactatgt aagaacaaaa ccaaatcgca tgttatacgc tcagttgttt ttaaaatctc
    15781 aggcaacccc tgccagccgc aatacgtatt ttattcacaa atattaaccc ttggaaactt
    15841 ggaatcccta catctattaa tccagggttg tattagtaac gattctaaga gtcagcggga
    15901 attttatgaa cattattacg gtttcgcttt aaaaacagtt ttcaggtata tttataaata
    15961 cgaaaaggca acggatgtag tgaatgatgg atttgtaaag atctttaaaa gtcttcccag
    16021 gtttcagatc aataaaggaa gtaaggatac agaaaagatc ttgatgggat ggatgaagcg
    16081 tattttgatc aataccgcaa ttgatgaatt aagacgacaa cagcttattc cggaaatcgg
    16141 cgaactaccg aattatatct ggaatgaaat ggacaaaggt cagaatgctg atcagaaaat
    16201 tctgtacaag gaacttattt gcgagatcaa acgactgcct ccttcctatc gcacggtgtt
    16261 caacatgttt gttatagacg gtttttccca ccaggaaata gcgaatatgc tcggtatttc
    16321 tgaaggaaca tcaaaatccg cgttagcaaa agcaaaggct caactgaaaa aatttattaa
    16381 taacaggttt tcagaaacaa aacatgcaat tctccgacga caattttgat gacctggttc
    16441 aaaaagcggc tgaggagtat cccttgagaa ctgacaactc caactgggat gtgattagcg
    16501 tgcggttgaa tacaaatggg tttcatcaaa agcctataca aaacaggaaa tggccatatg
    16561 cggccgtcct gttgttgctg ttaggcggtg tactgtttac gatcgtcgag tattcgggta
    16621 actcgtcaac tgcaaatcaa aatgccggtg ttcaaaaagc agccgatcaa aaaaacacaa
    16681 cgaatgccac aacgaacagg cccgagggta ataaacccga tgttgcagga gttcaaataa
    16741 gtaaagctaa cagcgttaat ccaagcgtag catcagaagc ggttcccggt accagaattt
    16801 caaaagctga tccttcggga aacggaaatg ttgcatacga tttcaatagt tttgtggcaa
    16861 ctcccgaaca gcaaacagat gccgtacaga gcgaggcttt gactgaaacg cgcgttcctc
    16921 aatccaatca aagcagtttg aagcccgaga gtgcaaatca ggatgttcaa aattcaattg
    16981 catccaccac gcctgtgacg acgaatgcga atgcagcgac aactaaaaat gagaaagcat
    17041 caacgactat acccataact ctgaagacgc agccgaagac attatacggc aggtttttcg
    17101 caggtccaca actgtcaacg gttaaatttc agcagacaga taaggtcggc taccggatag
    17161 gcgtagctgt tggctaccgg cttaacaacc gattcagcct ggaattgggc atgcaaagag
    17221 agaaaaagaa tttcttcagc gatggcaaat actttgaccg ctcaagcctg agattgaaag
    17281 agtcaaccgc gatagaatca ctccatggaa gttcggtttt aacagacatt cccattagtc
    17341 ttcggtacaa cttgaatgct aaggggaaag gtcagttttt tgcaacggca gggctgagtg
    17401 gagttctgat cacacatacc gaaaggtacg actatgcagt taccaaagac ggtataccgg
    17461 acaacttatc gcgcagctac agttctgcag aaaccacaaa atatttttca actgcgaaca
    17521 tgagcgtcgg ttatgagaca ccgctgagca agtcattgaa gctgcaagtt gaaccgtatt
    17581 accaggtgca tctacaggga tttggcatcg gtgatctgcc tttaaatagt ttcgggatca
    17641 acttaggagt tgtgaagggt tttaaatagc agtgtacctt ttttgtttgt ttatagtgtt
    17701 taatgttccc ttagcccggc ctaaaaaaaa caaatctttg ggggttcttt tagagtggta
    17761 aactcggcct cgctaccagg cggggctttt ttgtggggtt aatcgggtga ttagtttatc
    17821 gggataatgg gagtattggg ctattaggag tttcgagtac tgccacgttg tctccgaatt
    17881 ataaatgaga tcccgccaaa caaaccaata accaaataaa caaattaacc aatagccact
    17941 tctaaaatgg ataaccgatc gcgaggttcc acacgatgtt gttctttctc caatcggagt
    18001 tcccgatgtc gatcgtttta ccatccggtg gcacataagg cagccttaaa ggaaacgcaa
    18061 tatcgatcct gaataccaaa aagcttatgt caaaacgcaa acccaaaccg gcgtcaacgg
    18121 ctacctggtt gaggaactgg cttgtaaatt ttgcccccgg tctgtctgtg tcttctctta
    18181 gggtccaaac atttcctgca tcaagaaacg cggcccagcg cacgatcgaa aataaccggt
    18241 cgcgatattc gagcatcgtg agcaacttga tatctcccgg ctgatcggcg acaaaagtat
    18301 cccgcggatt acctgcataa taagagcccg gtcctagtgt ccttgctcta aaaccgcgct
    18361 gatcgctaac accacccgca aaaaatgctt ttatgaatgg catgtttaag gtattgccgt
    18421 aagcaacgcc aagaccgcca agtacgcgcg cattaaagga acgaaactgg gtgcccagtc
    18481 gcctgtagta tcttgcatct gcttcaagcc ttacatactg attaaaaggc gtcccgaaga
    18541 tctctttctg gtttccggtt tttacgttag cacccgtgat aagtcctatt aaatttccgg
    18601 agaggctgac gttgccgttg aagaaaaaat tattgcggtc tgtattagcc cgggccagcg
    18661 tattgtaatt gtaattataa gaattcccca atataaattg ttgttctata ctgcgagcta
    18721 acacgatatt cgagtcaagc actttttgaa agctgtccgt tatatttctt ggttgaacat
    18781 aattaattat gaaaggcgtg agttcgtgct caaccggaat ccttgttttc caaatgtatc
    18841 ccacgctacc aagtgccgag gtaagcaggt attcggttgt cttgttatat aattcgtatt
    18901 gagcgcgaaa tcttgtttgc ggaacgaagg cgctgctcgt gttcagattg aacggggcca
    18961 gtattcgcgg cacgtacagg ttaacctcgg taccaccagt cagtgtattc acgctgc
//
LOCUS       DASQJI010000162         4414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1242735,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000162 DASQJI010000000
VERSION     DASQJI010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4414
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242735"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /gene="ychF"
                     /locus_tag="VEV83_05030"
     CDS             complement(<1..768)
                     /gene="ychF"
                     /locus_tag="VEV83_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HYK44505.1"
                     /translation="MALQAGIVGLPNVGKSTLFNALSNAKAQAANFPFCTIEPNVGVI
                     TVPDERLFELKKLVHPQRVIPATVEIVDIAGLVKGASKGEGLGNQFLGNIRNTDAIIH
                     VLRCFDDDNVIHVDGSVDPVRDKEIIDIELQLKDLDTVEKKIARTEKVSRTSADKEAL
                     RGLEILQQLKTHLEQGRNARALDVNETEKAKHLEDLFLLTMKPVIYVCNVDEKSVVKG
                     NNYTQAIEEAVKNEEAEILFISAAIESEIAAMDSFEDR"
     gene            900..2138
                     /locus_tag="VEV83_05035"
     CDS             900..2138
                     /locus_tag="VEV83_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HYK44506.1"
                     /translation="MALNIVWIAFFAIAFLIALIKCIFFGDTLIFKTLTDGLFDAAKT
                     SVTDVAFPLAGTLIFFLGLMNIAEKAGAIKKLAQWLNPFMKRLFPEVPANHPAMGEMV
                     MNFSANMLGLDNAATPFGLKAMESLQSLNPRKEVASNAQIMFLVLHTSGLTLIPLSII
                     AYRLANNSKEATSIFIPCVAATVVTTLVSILIVSFWQKLKWDLILIAWILGISVIIGC
                     ILFYVATLNDAQRNTFSNISGSLILLLLIMAIIAAGVYKRVPVFETFIDGAKDGFNVV
                     LKVIPYLVGMLVAIRVFRDSGAFDYIVNGITAVVKLTGLNTDFVPSLPVAIMKPFSGS
                     GARGMMIDIFKNPAYGADSFVGKLASTFQGSADTTFYILALYFGSVGIKNVRYAVWAG
                     ILADIIGVVAAIIIGYLFFH"
     gene            2291..3601
                     /locus_tag="VEV83_05040"
     CDS             2291..3601
                     /locus_tag="VEV83_05040"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK44507.1"
                     /translation="MVSKLSSDEVLSFLIIVSIILITARILGEIFRKFKQPAVIGEIL
                     AGVILGPSLLGTLAPDFFAKVFTSGNGVPYKAFDGLAQIGIILLMFIAGFEVDLKQIR
                     KQGRQAASISLMGLIFPFALGFGTVWFFYDRIFSAPSSTNLVIPAMFFGTALSITALS
                     VIAKILLDLNILRSKIGNLVLTAAMIDDFLGWILFSIIIQMMGKSDGSFGSVALVIGF
                     TVFILTIGRWIVDKIFLIADKFLSVGGLITIAVCLCLLSAVLTEYLGVRGIFGAFLMG
                     VAIGDSKYFPERLQSILHQFVVNIIAPLFFASIGLRVNFVTNFNIEIVTIILLIACVA
                     KLVGAGIGSRMSGMSKNESYAVAFGMNSRGSQEIVLGTLALQAKIIDEPIFVGLVVMT
                     VVTILIAGPMMKYFLAKHEAVVQGTRAKETITIIGQHEGVATGA"
     gene            3756..>4414
                     /locus_tag="VEV83_05045"
     CDS             3756..>4414
                     /locus_tag="VEV83_05045"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK44508.1"
                     /translation="MVSKLSAEEVLTFLIIVSVILITARIFGEICRKFNQPAVIGEIL
                     AGIMLGPSLLGSVFPDLFKEIFISQPRSYAAFDGLANIGIILLMFIAGFEVDLKQIRK
                     QGKQAASISIMGLAFPFMLGFATVYVFYNSIFATSSSDRTITAMFFGTALSITALSVI
                     AKILLDMDMLRSKLGNLILTAAMINDFIGWILFSIIIQLMKTGSQEGSFSSVTLVLLF
                     T"
BASE COUNT         1087 a          969 c          983 g         1375 t
ORIGIN      
        1 tctgtcttca aaactgtcca tagcagcgat ctcactttct atagcggcgc ttataaaaag
       61 aatttcagct tcctcgttct taactgcttc ttcaatagcc tgggtataat tatttccttt
      121 cacaacagat ttctcatcaa cgttgcacac ataaattaca ggcttcatag tgagcaggaa
      181 aagatcttca aggtgcttcg ccttttccgt ttcgtttacg tcgagcgccc gcgcgtttct
      241 tccttgttca agatgcgttt tcagttgttg caaaatttca aggcctctta gtgcttcctt
      301 atccgcgctt gtccgggaaa ctttttctgt tcgtgcaatt ttcttttcaa ctgtgtcaag
      361 gtcttttagc tgcagctcga tatcaatgat ctctttgtcg cgcaccggat ctacgctgcc
      421 atccacatga attacattat cgtcgtcaaa acaacgcaat acgtgaatga tcgcatcggt
      481 gtttcgaata tttccgagaa actggttgcc gaggccttcg cctttgctgg caccctttac
      541 taagccggcg atgtcgacta tttcgacggt tgcgggaatc acacgttgag gatgaaccaa
      601 ttttttaagc tcgaaaagtc tttcatccgg cactgttatt acgccgacat ttggttcgat
      661 agtacagaaa ggaaaatttg cggcctgcgc ttttgcgttg ctcagcgcat taaacaaagt
      721 tgactttccc acatttggta atcctacaat tcccgcttgt aatgccattt cgatttacga
      781 attacgtttt acgattacga tctctgtttg ttgatcgttt tcaaaatttt gaggcgcaaa
      841 agtagtaatc ctccgataat aagaaagttt caattatttt acgtcctcat caccgtcata
      901 tggctttaaa cattgtatgg atcgcatttt ttgcaattgc ctttctcata gcgctcatca
      961 aatgtatttt tttcggtgat acactcatct ttaaaaccct taccgacgga ctcttcgatg
     1021 cagcaaaaac ctccgttaca gacgtcgctt ttccgctggc agggacgctg atattttttt
     1081 taggattgat gaatatcgcg gagaaggccg gcgcgataaa gaaactggcg caatggttaa
     1141 atcctttcat gaaaagatta tttcctgaag tgccggcaaa tcacccggcc atgggagaga
     1201 tggtcatgaa tttcagtgcc aatatgcttg gacttgataa tgctgcaacg ccattcggac
     1261 taaaagcgat ggagagcctt caatcgctca atccccgaaa ggaagttgcg agcaatgcgc
     1321 agatcatgtt tcttgttttg catacaagtg gccttacact catcccgctt tctataatag
     1381 cttatcgact cgcaaataat tcaaaagagg caacgagcat cttcattccg tgtgttgcgg
     1441 caaccgttgt tacaacgctt gtatcaattc tgattgtctc attctggcaa aagttgaaat
     1501 gggatcttat attaattgcc tggatattgg gcatcagcgt gatcatcggt tgtatcctct
     1561 tttatgtcgc gactttgaac gacgcccaaa gaaatacttt tagtaacatt tcaggcagtc
     1621 tcattctact gttactgatc atggcaataa tcgcagctgg cgtttacaaa agggtccccg
     1681 tgttcgaaac attcatcgac ggcgcgaaag atggtttcaa cgttgtattg aaggttatcc
     1741 cttatctcgt tggcatgctt gtcgcgattc gtgtgtttag agacagcggc gcatttgact
     1801 acattgtaaa cgggatcacc gcggtcgtaa aactaacagg attgaatacc gattttgtac
     1861 cctcgcttcc agtcgctatc atgaagccgt tcagcggtag tggcgcacgg ggaatgatga
     1921 tcgatatttt caagaacccg gcatatggcg ccgactcttt cgttggaaaa ttagccagca
     1981 cgttccaggg atctgccgac acaacattct acattcttgc gctatatttc ggaagtgttg
     2041 gaataaaaaa cgtgcgctat gcggtgtggg ctggcattct tgccgatatc atcggcgtgg
     2101 tggcagctat tatcattggt taccttttct ttcactaaaa aattgggtcc tcacttctaa
     2161 cgaacaagtg ccgcccgcct gcagacgcaa aatttttttt caaattccta gtacgttact
     2221 aggacatatg gaataaatat ctttattttt ggtttcgttt accatttgtt tatcaccaaa
     2281 aatcagcact atggtttcca aacttagttc agatgaagtg cttagttttc tcatcattgt
     2341 aagcatcatc ctgatcacag cccgcatttt aggagagatc tttcgcaaat tcaaacaacc
     2401 tgccgtcatc ggagaaatac ttgccggcgt gatactcggc ccgtctttgc ttggtacatt
     2461 ggctccggat ttcttcgcaa aagtttttac ttccggaaat ggtgttcctt acaaagcgtt
     2521 tgacggactg gctcaaattg gcatcatact actgatgttc attgcgggtt ttgaggtgga
     2581 ccttaaacag atccgcaaac agggcaggca ggccgcgtcg atcagcctga tgggacttat
     2641 atttcctttt gcacttggat tcgggaccgt ttggtttttt tatgaccgga tcttttccgc
     2701 gccgtcatcc acgaatcttg tgataccagc gatgtttttc ggaacagcgt tgtcgataac
     2761 cgcactttct gtgattgcaa aaatcttact tgatcttaat atccttcggt ctaaaatcgg
     2821 caatttggta ttgaccgctg ccatgataga tgacttcctt ggttggatat tattttcgat
     2881 catcatccag atgatgggta aatccgacgg ttcttttggc tcggtagcgc tcgtaattgg
     2941 ttttaccgtt ttcatcctga cgatcggtcg ctggatcgtt gacaagatct ttttgatcgc
     3001 agacaaattt ttatccgtag gcggattgat cacgatcgct gtatgcctct gcctgctgag
     3061 tgcagtattg actgaatatc tcggcgtacg cggaatcttc ggggcgttcc tgatgggcgt
     3121 tgcgatcggc gactcaaaat actttcccga aaggcttcaa agtattttac accaattcgt
     3181 agtgaatatc attgcacccc tgttctttgc ctcgattggt ttgagggtaa actttgtgac
     3241 gaatttcaac atcgaaattg tgacaattat tttattgatc gcgtgcgttg caaaactcgt
     3301 tggggcgggc attggcagcc gcatgagcgg tatgagcaaa aatgaatcat acgctgtggc
     3361 atttggaatg aattcgagag gatcgcagga aattgtattg ggaacgcttg cgctgcaggc
     3421 gaagatcata gacgaaccga tttttgttgg gctcgttgta atgacggttg ttaccattct
     3481 catcgcaggg ccaatgatga agtatttcct ggcgaaacat gaagcggttg tgcagggcac
     3541 gcgagctaaa gaaacaatca ccatcatcgg gcagcacgaa ggtgtggcta cgggagcgtg
     3601 agataaaatt tttcttaata atatcatagc ggctttggcc gctatttttt taaccgtcaa
     3661 caagcgaggc cggctaattt ctactaaagt catagcctta gggataattc ttatttttga
     3721 ggccgatagc gatcaccacc aacaaataat aagctatggt ttcaaagctt agcgctgagg
     3781 aagtgctaac gtttctgatc attgtgagtg taatattgat cacggcgcgg attttcggag
     3841 agatctgcag aaaatttaac caacccgcgg taatcggtga aattcttgct ggtatcatgc
     3901 tcggcccgtc tcttttaggt tctgttttcc cggatctttt caaagaaatt tttatttcgc
     3961 aaccgaggag ttatgcggct tttgatggcc tggcaaatat tggtatcata ctgctgatgt
     4021 ttattgcggg attcgaggtt gacttaaagc agatccgtaa acaggggaaa caggctgcct
     4081 cgatcagcat tatgggactg gcatttcctt ttatgctagg ctttgctacc gtgtacgtgt
     4141 tttacaatag catattcgca acctcgtcat cagatcgaac aatcaccgca atgttttttg
     4201 gaacggcgtt atcgatcaca gcactttctg tgatcgcgaa gatcctgctg gatatggata
     4261 tgcttcgttc gaaacttgga aaccttatcc ttactgctgc gatgataaat gacttcattg
     4321 gctggatatt attttccatc atcatccaac tcatgaagac cggcagccag gaaggatcgt
     4381 tctcgtcggt aacactggtg ttgttgttta cgat
//
LOCUS       DASQJI010000163         4190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1242805,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000163 DASQJI010000000
VERSION     DASQJI010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4190
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242805"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VEV83_05050"
     CDS             complement(<1..546)
                     /locus_tag="VEV83_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK44509.1"
                     /translation="MKHKIVLLCAVVVAAIQQTTAQNFDTVQIKTVKITETISMLQGS
                     GGNVGVLTGKDGIVIIDDQFAPLSEKIKAALKALSDKPVRFVINTHFHGDHVGGNENF
                     GGEGAIIVAQDNTRLRMTSDQFSKAMNFEQKAAPYDALPKVTFADSVTLHLNGETAKV
                     IHVKNAHTDGDAFIYFKESNVV"
     gene            complement(594..2753)
                     /locus_tag="VEV83_05055"
     CDS             complement(594..2753)
                     /locus_tag="VEV83_05055"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYK44510.1"
                     /translation="MRKFLLLPVIACCTWCCTNAQSKEGIKVTDMLQIKSIGSVWITD
                     DGSKAAFSVLNIEPDTAKWEYKYVTQIWTVNTDGSHLRQLTFSKDGASQPKWSHDGKQ
                     LAFVRAVDGKPQVFLMRFDGGEAMQLTSFKYGASSPEWSKDDKHILFSSSISLRDLLT
                     DTALNPNKEIPKWPFEKPGFANNSNLKRDTTTADPDGSLTAIRSYLASNERDNKAKVI
                     DKLDFEEEAVTSSNINFNHIFITDLTPGAKPKEITHGFYSFSNANFVDEKTLVVEGDV
                     DNKEHPDRSLESEIFRVNIDGTGLQQILGKDSMNYNSATVSSTGKWLAYMYGRSNDVD
                     VPFLAVMPLDGKEENRVDIPYDRIKFNLSWTKDENYLYFAAQSNGGVVLCRFDMRAKK
                     LDTLTDFNSGIVNYAVSANKLLFAKTEVADPSELYMADAAGKNAQKITSFNSSWLQNR
                     QLSFPEKHTFINDKGMTVEYWVMKPVNYQAGKKYPLLLEIHGGPSSMWGPGEFTMWHE
                     FQFFCAKGYGVVYSNPRGSGGYGVDFLRANINDWGEGPTSDVLTAFDKTVAEGWADTS
                     KLLITGGSYAGYLVSWIIGHDHRFKAACSQRGVYDLSTFFGEGNAWRLIPLWFGGYPW
                     EQKVKEMLDKESPISYVQNITTPYIIFHGENDLRTGITQSEMLFRSLKVLDRPVEYVR
                     HPGATHEITRSGNNRQRIDQMLRTYEFFERFISTTNN"
     gene            2923..3669
                     /locus_tag="VEV83_05060"
     CDS             2923..3669
                     /locus_tag="VEV83_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HYK44511.1"
                     /translation="MTVCIYDNSSALGKAAGTDAADLIQSAIHSNGRANIILATGTSQ
                     FETLDHLVDATGIDWHRVVMFHLDEYIGLPVNHPASFRKYLQERFVSKASALEATYFI
                     HGDEDPARECARLNKIMAEHEIDVALVGIGENGHLAFNDPPADFETEDPFIVVELDEK
                     CREQQLAEGWFKSIDEVPKKAISMSIKQILKSKNIICSVPGARKAIAVKNCLEEAVSN
                     LYPASVLQQHPNCTIYLDDLSASLLSKNIA"
     gene            3759..>4190
                     /locus_tag="VEV83_05065"
     CDS             3759..>4190
                     /locus_tag="VEV83_05065"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK44512.1"
                     /translation="MKELIKIHNGKLITSDKIVDDASVLVRSGTIVEVRETDIQNENA
                     MEIDAKGNYISPGFIDMHVHGGGGCDFMDATESAFLTIAETHAKYGTTSLLPTTLSAS
                     KEDILKTLAVYEIANRNNINGAQFLGMHLEGPYLSSRQCGAQ"
BASE COUNT         1128 a          966 c          901 g         1195 t
ORIGIN      
        1 tacaacattc gattctttaa agtagatgaa tgcatcgcca tcagtatgtg cgtttttcac
       61 atgaataacc ttcgcggtct ctccattcaa atgaagcgta acggagtctg caaaagttac
      121 ttttggcaac gcatcataag gagctgcttt ttgttcaaag ttcatggcct ttgaaaattg
      181 gtcgcttgtc attcgaagcc gcgtgttgtc ctgtgccacg atgatggcgc cctctcctcc
      241 aaaattttca tttcctccca cgtgatcacc gtgaaaatgc gtgttgatca cgaaccttac
      301 cggtttgtcg ctcagtgctt ttaaagcagc ttttattttt tctgataatg gagcaaactg
      361 gtcatcgatg atgacaatgc catccttccc cgtcaacacg ccaacatttc caccagaacc
      421 ctgcagcatc gaaattgttt cggtgatctt gaccgttttg atttgtactg tatcaaaatt
      481 ttgtgcggtt gtttgctgga ttgcggcgac caccactgcg caaaggagaa cgatcttgtg
      541 cttcataaaa actgttttac agtgaagaga agttagagcg acgaatattc tgtttaatta
      601 ttagttgttg aaataaatct ttcaaaaaat tcatacgtcc tcagcatttg atcaatgcgc
      661 tgacgattgt tgccacttct tgtgatctca tgcgtcgctc ccggatggcg aacatattcc
      721 actggcctgt ccagcacttt caaacttctg aacagcatct cactttgtgt aataccggtt
      781 cgcagatcat tctctccatg aaaaatgata taaggcgttg tgatgttttg tacgtagctg
      841 atcggggatt ccttgtcgag catctccttt actttttgtt cccacgggta tccgccgaac
      901 caaagcggta tgaggcgcca tgcgtttcct tcgccaaaaa atgtactcag atcgtacacg
      961 ccacgctgag aacacgctgc cttaaaacga tgatcgtgac cgatgatcca tgaaacaaga
     1021 taacccgcgt aagatcctcc ggtaataagc aacttgcttg tatcagccca cccttcagca
     1081 acagttttgt cgaacgctgt taacacgtca ctcgttggcc cctcgcccca atcgttgatg
     1141 ttcgctctta agaagtcgac accataaccg ccggagccgc gggggttgct gtataccacg
     1201 ccgtaacctt tcgcacagaa aaattgaaac tcatgccaca tggtgaattc gcccgggccc
     1261 cacatcgacg aagggcctcc atgtatctcc aacaacaaag gatatttttt tccggcctga
     1321 taattaaccg gcttcatcac ccaatattca acggtcattc ccttgtcgtt tataaatgtg
     1381 tgcttttcag gaaagctcaa ttggcggttt tgtagccacg aagaattgaa cgaagttatc
     1441 ttctgtgcat tttttccggc tgcatcggcc atgtataatt cggatggatc agcaacttca
     1501 gtttttgcaa acaacaattt gttcgcactc accgcgtaat ttactatgcc gctgttgaaa
     1561 tcagtaagcg tgtcaagttt tttcgctctc atgtcgaacc tgcatagcac gactccccca
     1621 ttactttgcg ctgcgaaata caaatagttt tcatccttcg tccacgacag gttgaatttg
     1681 atcctgtcat aaggaatatc gacccggttc tcctcctttc cgtccagcgg cattacagcc
     1741 aggaaaggca cgtccacatc attactcctt ccatacatat aagccagcca tttccccgta
     1801 gatgaaaccg tagcgctgtt gtagttcatg ctgtccttac ccagtatttg ctgtaagcct
     1861 gtaccgtcaa tgttgacacg aaatatttca gactccaaac ttctgtcagg atgttctttg
     1921 ttgtccacat cgccttcaac tacaagtgtt ttttcgtcca cgaagtttgc attcgagaaa
     1981 gaataaaagc catgcgtaat ttcttttggt ttagcgccgg gcgtcagatc agtgatgaat
     2041 atatgattga agttaatgtt ggacgatgta acggcctctt cttcaaagtc gagtttgtcg
     2101 atgactttcg ctttgttgtc tctttcattg cttgcaagat aagaccggat ggctgtcaag
     2161 cttccatccg gatctgcggt ggttgtatcc cgctttaaat tgctattatt tgcgaatccg
     2221 ggtttttcaa aaggccactt tggaatttct ttgtttgggt ttaacgcggt atccgtaaga
     2281 agatcgcgca gagaaataga agacgaaaat aaaatatgtt tatcatcctt gctccactcg
     2341 ggactgcttg ctccgtactt aaagctggtc aactgcatcg cctcaccgcc atcaaatctc
     2401 atgagaaata cttgaggctt accatcaacg gcgcgaacga acgcaagttg ttttccatcg
     2461 tgactccatt ttggttgcga agctccgtcc tttgaaaagg ttaactgcct gagatgcgag
     2521 ccgtccgtat taacggtcca tatttgtgtc acatatttat attcccattt ggccgtgtcg
     2581 ggctcaatgt ttagtactga aaaggccgct ttgcttccat cgtccgtgat ccaaacactg
     2641 ccgatcgatt ttatctgcag catgtcagtg accttgatcc cttctttgga ttgcgcgttt
     2701 gtacaacacc aggtgcaaca tgcaataaca gggagcaaaa gaaattttct cataagaatt
     2761 atgtttttgt cagtaaaccg tgagcgaaga aattgcaata taatgattcg aaacaagcat
     2821 gtgccgtttg ccggcttaac ggcctgattt tggtttatgg cgcgaatgca tctttcgcga
     2881 acttaacttc gttgaaattt ttcgaatcca tcctgaactt agatgacggt ctgtatttat
     2941 gataatagtt ccgcgttggg caaggccgcg ggcacggacg ccgcagattt gatccaaagc
     3001 gccattcatt caaatggccg cgcaaatatt attcttgcga caggcaccag ccaattcgaa
     3061 acattagatc atttggtaga cgcaacagga attgactggc acagagtggt tatgtttcat
     3121 ttggatgaat acatcgggct gccggttaac cacccggcaa gttttcgaaa atatctgcag
     3181 gaaagatttg tgtcaaaagc gtcggccctc gaagccacgt actttataca tggagacgaa
     3241 gatccggcac gggaatgcgc aaggctcaac aaaataatgg cggaacacga aattgatgtg
     3301 gcacttgtcg gcatcggaga aaacgggcac ctggccttca atgatccgcc agcagatttt
     3361 gaaacagagg atccatttat tgttgttgaa ttggatgaaa agtgcagaga acaacaactt
     3421 gccgaaggct ggttcaaatc tattgatgag gttccaaaga aggccatcag catgtcgatc
     3481 aaacaaattt taaaatcaaa aaatattatc tgttcagttc ccggtgcacg aaaggcgatc
     3541 gccgttaaga attgcctcga agaggcggtg agcaatttat atcctgcaag cgttttgcaa
     3601 caacatccaa attgcaccat ctatctcgac gatctttcag catcgctgct gtcaaaaaat
     3661 atcgcatgaa ccaacttgtg gataatattc aaagtccaaa cggtcagacg gttgaaaccg
     3721 tcagaccgat accaaatttc atttaaggaa atcattggat gaaagaactg ataaaaatac
     3781 acaacggaaa actgataaca agcgataaga tcgttgatga tgcatctgtt cttgtgcgca
     3841 gtggaacaat cgttgaagtt cgtgaaactg atattcagaa tgaaaatgct atggagatcg
     3901 atgcgaaggg aaactatatt tctcccggtt ttattgacat gcacgtgcat ggcggaggcg
     3961 gatgtgattt tatggacgct actgaaagcg catttctcac gatagccgaa actcatgcga
     4021 aatatgggac cacttcgctg ttgccaacca cattatcagc gagtaaagag gacattttaa
     4081 aaacgcttgc tgtttatgaa atcgcaaaca gaaataacat caacggtgca cagtttttag
     4141 ggatgcatct tgaaggcccg tatttatcaa gcaggcagtg cggtgcacaa
//
LOCUS       DASQJI010000164         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2472097,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000164 DASQJI010000000
VERSION     DASQJI010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2472097"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VEV83_05070"
     CDS             complement(<1..558)
                     /locus_tag="VEV83_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44513.1"
                     /translation="MKAILLLTVMCICYQCFSQNDVPSADVQIKSALLAAPKEKRDSC
                     TVYGYSADKQFIVLRQGTNELICLADDPNDSGFSAACYVKELEPFMQRGRELRKQGMD
                     DKQVFDTRGKEVEAGTLQMPKQPAALFVYTADDKDFDRTTGEVKNGYLRSVIYIPYAT
                     SASTGLPESPSGKGMPWLMNAGTYRA"
     gene            complement(735..>1832)
                     /locus_tag="VEV83_05075"
     CDS             complement(735..>1832)
                     /locus_tag="VEV83_05075"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK44514.1"
                     /translation="KFHERNLIQSRMAVLTQPHNGRGKCMARNLCHRGCPYGAYFSSN
                     SSTLPAAYNTGNLTLRPFSVVHSIIWDEQKHKATGVRIIDAETMQATEYFAPLIFLNA
                     SALNTTKIMLQSKSNTFPNGFANSSGVLGHYLMDHYSGPGVAAGFDILKDQYYFGQRS
                     TSVYVPRFQNVLKRDKKYARGFAYEVYVSRSEWTRGYNEQGAGAEWKDSLSLPGDWTA
                     SMFAFGECLPNEKNHVSLDESKKDKWGLPLLNVEMEYGENELAMHDDMISSAKEMLQT
                     GGPVWVQDISAPAVPGMTIHEMGTARMGNDPKTSVLNKFNQCHDAPNVFVTDGACMVS
                     TACQNPSLTYMALTARACDYAVQQLKKGEIK"
BASE COUNT          499 a          427 c          372 g          534 t
ORIGIN      
        1 tgctctgtat gtacccgcat tcatgagcca gggcatgccc tttcccgatg gactttcagg
       61 caaacccgta ctggcagacg tagcataagg aatataaatc acggaacgta agtaaccatt
      121 ctttacttcg ccggttgttc ggtcaaaatc tttatcatct gccgtataaa caaacagcgc
      181 agcaggttgt tttggcattt gcagtgtacc tgcttccact tcctttccac gtgtatcaaa
      241 tacctgtttg tcgtccatgc cttgttttct aagttcccgg ccacgttgca taaacggttc
      301 aagctcctta acgtaacatg cggcagaaaa gccggaatca ttaggatcat cggcaagaca
      361 aataagctcg ttggtacctt gtcgcaaaac gatgaattgt ttatcagcag agtacccata
      421 caccgtgcaa ctatctctct tctcctttgg tgctgccagc aaggcagatt ttatttgtac
      481 gtctgcagac ggtacatcat tttgcgaaaa gcattggtaa caaatgcaca tgacagtgag
      541 gagaagaata gctttcatat gaattcattt aagtgaaatt ttaaatcagg atacagaaga
      601 attaagctat taaagataaa tattttaaaa gcactgatgt acagcagcca ggaaaatgaa
      661 gtaatgaatg atgagtatta gcacatccgc tagttacaat gcactcatca ctgatcactc
      721 attactcatt caactcactt gatctccccc ttctttaact gctgcaccgc atagtcgcac
      781 gctcttgcag ttaacgccat gtaagtaagt gaaggatttt gacaagcagt agaaaccatg
      841 caagcgccat cggttacaaa aacattaggc gcatcatgac attgattgaa tttatttagc
      901 acagaagttt ttggatcgtt acccattctt gctgttccca tttcatgtat tgtcataccg
      961 ggcacggcgg gtgcgctgat atcctgtacc cagaccgggc caccagtttg aagcatttct
     1021 ttcgcggaag agatcatgtc gtcatgcatc gccagttcgt tttcgccata ttccatttct
     1081 acattcaata gtggcaatcc ccatttatct ttttttgatt catcgagact cacatgattt
     1141 ttttcattgg gcaaacattc accgaaagca aacatcgagg cagtccagtc gcccggaaga
     1201 gaaagagaat ctttccattc tgcacctgca ccctgttcat tgtatcctct tgtccattca
     1261 ctgcgcgata cataaacttc gtaggcaaag ccccgggcat atttcttatc gcgtttcaaa
     1321 acattttgaa accgcggaac ataaacggaa gttgagcgtt gaccgaaata atattggtct
     1381 ttcaatatat caaaccctgc agctactccg ggtcccgaat aatggtccat caaataatgt
     1441 cccaacaccc cgctgctgtt tgcgaatcca tttggaaatg tatttgactt tgattgcaac
     1501 atgatctttg tcgtgttgag cgccgatgca ttcaaaaaaa ttagtggtgc gaaatattct
     1561 gtggcctgca tggtttctgc atcgatgatg cgaacgccgg ttgctttatg tttttgttca
     1621 tcccagataa tactatgcac gaccgaaaac ggacgcagcg ttagattacc agtattatat
     1681 gccgcaggaa gagtcgacga attgctgctg aaataagcgc cgtagggaca gccgcggtga
     1741 caaagatttc tcgccataca tttccctctt ccgttgtgcg gttgtgtgag cacagccatt
     1801 ctgctctgaa ttaaatttct ttcgtggaat tt
//
LOCUS       DASQJI010000165         3363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_782844,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000165 DASQJI010000000
VERSION     DASQJI010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_782844"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VEV83_05080"
     CDS             <1..552
                     /locus_tag="VEV83_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYK44515.1"
                     /translation="NNFTGIPLNHQQMTKIGLLSDTHNYLDDAVLKQLDTCDEIWHAG
                     DFGNIDIANRLRALKPLKGVYGNIDGYDIRSEFSEQLLFYCEEVKVLMKHIGGYPGRY
                     APGVKNIIAKEQPQLFISGHSHILKIMYDDKLKCLHMNAGAAGLQGWHKVRTIIRFVV
                     DGKELTNCEVVELGSRSKLSNLI"
     gene            complement(1195..2358)
                     /locus_tag="VEV83_05085"
     CDS             complement(1195..2358)
                     /locus_tag="VEV83_05085"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HYK44516.1"
                     /translation="MPSTRRKKYLSKPLKILIVVIAVLVILRLLLPSIVLHYANKSLA
                     NLDGYYGHVDDIDISLYRGAYQINGMYLNHVDKRTGKQTDFFKVTTIDLSVEWSALFH
                     GSLVGELEFESPQLIFTKNKTEISDVKKDTNDFRKILKDFMPLKVNRFEVNNGSIHYS
                     DKTASPDVDVALTQTYILAQNLRNVEDTRTVLPSTVVAHANAYGGSMSLNMKLNLLAE
                     RATFDLNAEVKNTNLVSLNDFLKAYGGFDVNKGTFGLYTEFAAKNGKYKGYVKPVIKD
                     LDVVGREDKGDSFFQKAYETLVGAAGKILENRKKEQVATKVPIEGEFGASHTNVVEAI
                     FQLLKNAFIQALLPSVDNQININSVDQNADEHQSLLHKIFGGGKKKDAEENKK"
     gene            complement(2573..2989)
                     /locus_tag="VEV83_05090"
     CDS             complement(2573..2989)
                     /locus_tag="VEV83_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HYK44517.1"
                     /translation="MALQEKYKELIDTAKSSGVRNLRVSEQNNVLHVTGEAPTGQVKD
                     NLWNVYNKIDPDYRAGDLVLDVNTNSAPGTKAKVVTETSNLNIRKGPGTDQAIVGKAG
                     HNEIVTIVSKANDQWSLIRTDNGEEGYVYSQYLSPV"
     gene            complement(3000..>3363)
                     /locus_tag="VEV83_05095"
     CDS             complement(3000..>3363)
                     /locus_tag="VEV83_05095"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYK44518.1"
                     /translation="LKIQFMKRQKLRSCMLVLVAAAALTTSSCKDKAKETDNTSTATS
                     ADTTSATTMDTSTVVSDDALRTQLKDATKDYPGVTATVDNGEVTLTGTIKRDKLQDLL
                     QAVNALNPKKVNNNLTIQ"
BASE COUNT          893 a          728 c          688 g         1054 t
ORIGIN      
        1 aataatttta cagggatacc tctcaaccat cagcaaatga cgaaaatcgg cttgctatca
       61 gacacgcata attatttgga tgatgcggta ttaaagcaac tggatacatg tgatgaaata
      121 tggcatgcag gtgatttcgg aaacatagat attgctaatc gtttgcgtgc cttaaaacct
      181 ctgaaaggcg tgtatggcaa tattgatggc tatgatataa gaagcgaatt cagcgaacag
      241 ttattgtttt attgcgaaga agtaaaggtg ttgatgaagc atatcggcgg ttacccggga
      301 agatatgcac ccggcgtaaa aaatataatt gcaaaagaac aaccccaatt atttatatcc
      361 ggccactcgc atatattaaa aataatgtac gatgataaat tgaagtgctt acacatgaac
      421 gccggtgctg cggggttgca gggctggcac aaagtaagga ctataataag gtttgttgtt
      481 gatggcaaag aactaaccaa ctgtgaagta gtggagcttg gcagcagatc gaagttatcg
      541 aacttgatat aaccttcatc ttgagcagta tcatccgttc cccgcctttc tttggttact
      601 ttttaacccg ttgctgttcg ccggccagca aagagacctt tgaatgaggc gtattgctgc
      661 catcaaaaaa agagccgtac aagtgagcga cgcaacgaag acgccataaa ataccacaga
      721 cggttacaag aaataaatta taaaaattgc tgacctgcca ttccttttaa aaatcaattt
      781 tacggcgtcc ccgtttcatt tcatcacggc aacatgccat aaaaaaaccg cctgcttcta
      841 ccacgggcgt tttaataact aacgaaataa ttttttattg ataacccggg ttttgttcaa
      901 tattcggatt gacctgcaac tctgattgcg gtatcggggc aaccgtgtga tgatctgtat
      961 aaggtatgac catggaccgg aaatggcgcc ggattgtggt gctctaaacc agctgagcta
     1021 acagccctaa ggaacgcaaa ataatgagaa ataaggacga gaaagtgcct gttcgctgaa
     1081 atcagctttc tcaatcatct ctcacggatg gtctcagatt cccataacag aagaaaaaat
     1141 tttgtgtaca cctgtatctg tgagaaactt ttctgattcc ctggttagtg ttttttactt
     1201 tttattttct tcagcatcct tcttttttcc gccgccgaaa atcttatgca acaacgattg
     1261 gtgctcgtca gcattttgat caacggaatt gatgtttatc tggttgtcca cactaggtaa
     1321 caacgcctgt atgaatgcgt ttttcagcag ttgaaatatg gcctcgacaa cgttggtgtg
     1381 tgatgcgccg aattcacctt caataggtac tttcgtggcc acctgctcct tcttccggtt
     1441 ctcaagtatt ttacctgcag cgcctactaa agtttcatat gccttttgaa aaaagctgtc
     1501 gcccttatcc tcacgcccca ctacgtcgag gtcttttatc accggcttta catacccttt
     1561 gtacttcccg ttctttgcgg cgaattctgt atataaacca aacgttcctt tattgacgtc
     1621 gaagcctcca taggctttta gaaaatcgtt cagacttaca aggttggtat tttttacttc
     1681 agcattaaga tcaaacgttg ctctttctgc caaaagattc agcttcatgt tgagcgacat
     1741 gctgccgccg tatgcattgg catgcgcaac aacagttgac ggaagaactg tcctggtgtc
     1801 ttcaacgttc ctgagatttt gagcaagtat ataggtttgc gtcaatgcaa catctacatc
     1861 agggctggca gttttatcgc tgtaatgaat actgccgtta tttacttcga accggtttac
     1921 tttgagcggc atgaaatctt tcaggatctt tcgaaaatca ttggtatcct tttttacgtc
     1981 gctgatctca gttttgtttt ttgtaaagat caattgtgga gattcaaatt ctaactcgcc
     2041 caccagcgaa ccatgaaaca acgcgctcca ttcaacagac aggtcaatag ttgtcacttt
     2101 gaagaaatcc gtttgcttgc ctgtgcgctt atctacatgg ttcaaataca taccattgat
     2161 ctggtaagcg ccgcggtaca acgaaatatc aatgtcatcc acgtgcccat aatatccatc
     2221 caggttcgca agtgatttat tcgcgtaatg caatacaatg gagggaagta gtaagcgcag
     2281 gatcaccagt accgctataa cgactatcag gattttaagc ggcttgctga gatatttttt
     2341 tcgccgggtt gatggcataa caaactgctt tttaaagcgt atagcattta ttataccata
     2401 caactccgcg aatatcaaac agattgttat aacagtcggc tgcaggagag agcgagaatg
     2461 aggataagaa atgtgaaatg ggaaagtatg agtttaagaa gccgaacttg ctcatttctt
     2521 attttttctt ttctcaagtc ttatcttctt acggtaaatc aatttttaat tttcataccg
     2581 gcgataaata ttgggagtac acataccctt cttctccgtt atctgttcgt atcaaagacc
     2641 attgatcatt ggctttgctg acgatcgtaa caatttcatt atgccctgcc ttacccacaa
     2701 tagcctggtc tgttccgggc ccttttctga tattgagatt cgatgtttcc gttacgactt
     2761 ttgcttttgt acccggtgcg ctgtttgtgt tcacatcgag tacaagatcg cctgccctgt
     2821 agtcaggatc gatcttattg tacacgttcc ataagttatc ttttacctgc cctgtcggcg
     2881 cttcgcccgt cacgtgcagt acattatttt gttcgctcac ccgcaaattg cgcacacctg
     2941 agcttttcgc tgtgtcgata agctctttat atttttcctg taatgccata atatacctcc
     3001 tactgaatgg ttagattgtt gtttactttc ttaggattga gtgcattcac agcctgcaac
     3061 aagtcctgca gcttatccct ttttatagtt cctgtaagag ttacttcccc gttatcgact
     3121 gtggctgtaa cacccgggta atcttttgtt gcgtctttaa gctgtgttct taaagcatca
     3181 tcagatacaa cagttgatgt atccatcgta gtcgctgatg tagtgtccgc gcttgtcgct
     3241 gtgcttgtgt tgtcagtctc ttttgccttg tctttacacg acgatgtggt gagagctgct
     3301 gcagctacaa ggaccaacat gcatgacctt aatttttgtc gtttcataaa ttgtatttta
     3361 agt
//
LOCUS       DASQJI010000166         3664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1704187,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000166 DASQJI010000000
VERSION     DASQJI010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704187"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VEV83_05100"
     CDS             complement(<1..191)
                     /locus_tag="VEV83_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK44519.1"
                     /translation="MYSKEFSNEVAIITGAGQGIGFEIAKQLCLKGAFVVLNDVDEKL
                     AQDAAAKIAGNCIAVAGDAA"
     gene            complement(528..2126)
                     /locus_tag="VEV83_05105"
     CDS             complement(528..2126)
                     /locus_tag="VEV83_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK44520.1"
                     /translation="MKNRLGIILLLFLSFVNRSFSQNSDHPNDPQGEVIYHLFQRSFY
                     DSNGDLQGDLNGVREKLDYLQDLGVTSILLLPLYESVFYHNYFSGDFEKIDEEFGSMT
                     DFIDLVKAVHAHGMKIYLDMETQYVTEDHQWWKDSYGNLNSAYSDYILYDDSAHTKPA
                     SIVFDLTSVTGYDNTTRKAGTVNLKSKNVLEYNYKLFKYFVDPNGDGKFDDGADGFRL
                     DHMMDNLDGKPQLTNLFADFWSPLFLRLRQVNPNLKFIAEQANWMSYGFDYFNEGNVD
                     RVFAFGLQYAISSFNKKKIEAIADTTFNGTPAGKEQVVFIENHDMKRFASAMNRDLNK
                     EKVGAALSLLLGGVPSVYYGQELGMFGIGGFNRFNNTDANDIPQREAFEWNKSDAGKG
                     MAIWYKNSGPWWDSTNLKANDGVSLEEEKNDPMSLYNFYKKMIALHKTNQAIAFGSYK
                     TVDNDNASVLTFMRSFENRKVLVAVNLSSSNQVASVIPGGTGTGNFSNSSLHLLYRSS
                     EPNNKTHALSFDLRPYAIEVWGTE"
     gene            2217..3371
                     /locus_tag="VEV83_05110"
     CDS             2217..3371
                     /locus_tag="VEV83_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 172 protein"
                     /protein_id="HYK44521.1"
                     /translation="MKKIHCLFMLMIPCVTFAQESFNGIDVNLSNLYRLSDAKTRSIS
                     PENFNGEKGKGGMATQGTGSNASKNLGQGWKVSPSVLIKSKTTFTVAEINGPGSISHI
                     WMTPTGNWRYTILRFYWDDEPNPSVEVPVGDFFCMAWGQYASVQSLAVTVNPGSAFNC
                     YWPMPFRKKCKITMENIADEDMIVYYQVDYVLTPVPDDAAYFHAQFHRVNPLPLKQNY
                     VIVDSIRGKGQYVGTYLAYGSNKNGWWGEGEIKFFMDGDTQFPTINGTGTEDYFCGSY
                     DFDTRKKNAAGVEESAYTEFSNPYTGLPQVIRGDGHYNIAQRFGLYRWHITDPIRFEK
                     DLKVTIQDLGWHQDGTYMLLQDDIASVAFWYQTEPHHPFGPLPSRYELER"
BASE COUNT         1007 a          832 c          784 g         1041 t
ORIGIN      
        1 gccgcatctc cggcaacggc gatacaattt ccagcaatct tcgcggccgc atcctgcgca
       61 agcttttcgt caacatcatt caacacaacg aaagctccct ttaaacataa ttgtttcgca
      121 atttcaaaac cgatgccctg ccccgcaccc gtaatgatcg ctacttcgtt tgagaattct
      181 tttgaataca tctttattat tgtgcttgcc taccgaaacc tttatgaagg tgtgggggtg
      241 atctgcatca ctccatggtg ctttacttgc cacgctcgct tgtacgtcca gtaattctat
      301 tcagcatata gcatctcact gaaaacatct ttgtttcctt attcaaatgt catttgttat
      361 cccaaaagtt tgcattggta cagtttagtg catctcatct ggaaataata gttacaagat
      421 acatcaacat caccatcaca aaaagcaacg aacccaatat tcgaccaaca tgaaattctc
      481 ttgcgtcgcc cggtacaaaa tattcatcct aattcctccg gcgtgactta ttcagttccc
      541 cacacttcaa ttgcataagg tcttagatcg aaagataatg cgtgcgtttt gttatttggt
      601 tcggagctcc gatacaacaa atgcagtgag gaatttgaaa aattaccggt tccggttcct
      661 cccgggatga cgctcgcgac ctggtttgag gaagaaagat tcaccgcgac aagaaccttt
      721 ctattttcaa acgaccgcat gaatgtaagg acagacgcat tgtcgttgtc gactgtttta
      781 taagaaccga atgcgatcgc ctggtttgtt ttatgtagtg ctatcatctt tttataaaag
      841 ttatacagcg acatcggatc gtttttttct tcttcgagcg aaacgccatc gttcgctttc
      901 aaattcgtgc tgtcccacca tggcccggaa tttttgtacc aaatcgccat gccttttccg
      961 gcgtcagatt tattccactc aaatgcttca cgctggggaa tatcgtttgc atcggtgttg
     1021 ttaaacctgt tgaaaccgcc aatgccaaac atgccgagtt cctgtccgta ataaacagac
     1081 ggaacaccgc ctaataataa gcttagcgcc gcgccaactt tctccttatt gagatcacgg
     1141 ttcatcgccg atgcaaaccg tttcatatcg tgattctcta taaatacaac ctgttcttta
     1201 cctgccgggg ttccgttaaa agtggtatcg gcgatcgctt cgatcttctt tttattgaag
     1261 gatgaaatag catattgaag cccaaaggca aaaacgcggt caacatttcc ttcgttaaaa
     1321 tagtcgaatc cgtaagacat ccagttggct tgctcggcga taaatttgag attagggttc
     1381 acctgtctca atcttaaaaa cagcggcgac caaaaatcag cgaataggtt cgtgagttgt
     1441 ggcttcccgt caaggttgtc catcatatga tcaagccgga atccatccgc gccgtcatcg
     1501 aattttccat cgccgtttgg atcaacaaaa tatttaaaaa gcttatagtt gtactccagc
     1561 acatttttgc ttttaagatt taccgtcccc gcctttcgcg tcgtgttatc ataacccgtc
     1621 acgctggtaa ggtcaaatac gatcgacgca ggctttgtgt gtgctgaatc gtcatacagg
     1681 atgtaatcac tgtatgccga attcaaattt ccatacgaat ctttccacca ctggtgatcc
     1741 tcggtcacgt attgagtttc catgtcaaga tagatcttca ttccatgtgc atggaccgct
     1801 tttacgaggt caatgaaatc cgtcattgac ccgaactcct catctatttt ttcaaagtca
     1861 ccggaaaaat aattatgata gaaaacggat tcatataaag gcaacagcaa aatggaagtt
     1921 actccaagat cttgcaggta atcgagcttt tcccgcactc cgttcaggtc gccctgcagg
     1981 tcaccgttgc tgtcgtaaaa gcttcgttga aacaggtggt atatcacttc cccttgcgga
     2041 tcgtttggat gatcggaatt ctgggaaaat gaccggttga caaatgacaa gaagagcaag
     2101 agtataatgc cgagtctatt tttcatacac gaactgttga actaaaatgt gcttgaaaat
     2161 ataaaaaact tcaggactgt ttatatttat tgattatttg ttttaaaaat ctaacgatga
     2221 aaaaaattca ctgcttgttc atgctgatga tcccgtgcgt cacttttgca caggagtcgt
     2281 ttaacggtat cgacgtaaat ctttcgaatc tttatcgatt gtcggatgcc aaaacgcgtt
     2341 cgatcagtcc tgaaaatttt aatggcgaga aagggaaagg cggaatggcg acacaaggca
     2401 caggttcgaa tgcttcgaag aatttagggc agggatggaa ggtaagcccg agtgtgctga
     2461 tcaaatcgaa aacaactttc accgttgcgg aaatcaatgg ccccggttcc atatcgcaca
     2521 tttggatgac gccaacagga aactggcgtt ataccatcct tcgcttttat tgggatgatg
     2581 aaccaaaccc ttcagtagaa gtgccggttg gggatttttt ctgcatggcg tggggacaat
     2641 atgcgtcggt gcaatcgctt gccgttacag taaatccggg cagcgcgttt aattgttact
     2701 ggcctatgcc attcaggaag aaatgcaaaa taacaatgga gaacatcgca gatgaagaca
     2761 tgatcgtcta ttaccaggtg gattacgtgc tcacaccggt gcccgatgac gccgcctatt
     2821 ttcacgcaca atttcatcgg gtaaatcctt tgcctttaaa acagaactac gtgatcgttg
     2881 acagcattcg tggcaaaggg caatatgtgg gtacatacct tgcgtacggc tccaataaga
     2941 acggatggtg gggtgaaggc gagataaaat ttttcatgga tggggacacg caatttccca
     3001 cgatcaacgg aacaggcacc gaggattatt tctgcggctc ctatgatttc gatacaagaa
     3061 agaaaaatgc ggctggcgtt gaagaatcag cgtacactga gttctcaaat ccgtacaccg
     3121 ggctgccgca agttattcgc ggcgatggac attataacat tgcacaacga ttcggtttgt
     3181 atcgctggca tatcaccgat ccaattcgct ttgaaaaaga cctgaaggtg accatacaag
     3241 atctcggctg gcaccaggat ggtacgtaca tgcttctgca ggatgacatc gcttcggtgg
     3301 cgttttggta tcaaacagag ccgcatcatc cgtttgggcc gctgccatcg aggtatgagt
     3361 tggagagatg atgttggaaa tgagaaatca ggaatctaac ttgctgtgct ttcgattcta
     3421 aagcggaaac gttattcctc ttcgtgtgtt cttagtgtat tctaagactt acaaattgcc
     3481 aaaaaacttt ttaggccgtt tgtaaatagt tctcgataaa tggcgtttgt cgttttatga
     3541 cttcgagact tggtccgaaa aattagaaac caccaagcca ccacggcacc aagtttcacc
     3601 aagttgaata tccatgcaat ctttggtttt caagtagcgc acgatgtaga aatttcacaa
     3661 agcc
//
LOCUS       DASQJI010000167         6908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_783028,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000167 DASQJI010000000
VERSION     DASQJI010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6908
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783028"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..1297
                     /locus_tag="VEV83_05115"
     CDS             47..1297
                     /locus_tag="VEV83_05115"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HYK44522.1"
                     /translation="MKRTIKYAVAVSLMCTVFALTAKAQQKNYNVAIFLYDKVELLDF
                     AGPGEVFASTNGFHVYTVSADGKEIRSQGFVTVKPEYSIDNAPKPDIIVFPGGNTSAS
                     QKDKKVLEWVNKTIADGNTVMSVCTGAAILAKAGLLDNLTVTTHHGFIEGLQAMLPDG
                     KVVTQTRFVDNGNIITTAGVSAGIDGALHMVARIKGQDVADATAWYMEYEKGIHAEGK
                     VVYKNPYIEKMKTRSGTQVNYSTASASIPYEGELTDLAKHLWTEGMYEQEAKVLEDAV
                     KWYPDQSTFYTLLSDVYHKLGKTAPMNETAFIKLLDEGRVDEAVAVYEKGRKDFPGWK
                     IFGEDAVNQAGYRALQKNDYANAIKIFELNVSAYPGSGNVYDSLGEGFLRAGDKKNAL
                     IYYQKSLDIDPANTNAKDVIKTLL"
     gene            complement(1672..2670)
                     /locus_tag="VEV83_05120"
     CDS             complement(1672..2670)
                     /locus_tag="VEV83_05120"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK44523.1"
                     /translation="MKKNLLLLLVFVKAFFAIGQTPDPPGKFIDIGGYRLHIDVHGTG
                     SPAVIFIAGSQAFSFDWALVAPEIANITTAVTYDRPALAWSDPGPMPRSLQQDVYELH
                     LLLERAGVKPPYVLVGHSLGGFIARLFEKKYPDEVKGLVEVDGTSEDVLLFINNKITR
                     LRSLTQNRELPPIKTSVDTFTKIPSKKDMDDFLKMIGQPGIDPPFDKLPEKYQQARMW
                     AQKQPKVLLADNGQYWAEEFEAMYTDSTYSLGNKPLFVLTSLRNDYPQSLGDSVRNEL
                     IQQKAKQQDRIAALSANSKHVVTTKSPHEIHLTEPELVINAVMEVINSVKTGQPLK"
     gene            complement(2789..3589)
                     /locus_tag="VEV83_05125"
     CDS             complement(2789..3589)
                     /locus_tag="VEV83_05125"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYK44524.1"
                     /translation="MRILPAGKYLGTKTESYTHNKLIFSKTTYCSSEAKDWHCHQNAF
                     FAYFLKGSNSERRESREIVSSPGTLLYYRSMEPHCNQRYSTGCRIFHVEIDNTWFHDN
                     DLVSKNVKADVIKDPTPKNTFAHMLQEFEIRDEFTGDSVENLLLYMWNLLSRNSQDRN
                     CIPPWVKKFDELQNDCTDNKLTLTAVAKQLNIHPVTLSKEFPRHYHRSFGDHVRHLRV
                     EKALKFLSKKNMPLAEVAFASGFSDTSNFIRSFRKVKGITPNQFRKLM"
     gene            complement(3665..4693)
                     /locus_tag="VEV83_05130"
     CDS             complement(3665..4693)
                     /locus_tag="VEV83_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44525.1"
                     /translation="MPFSPFFRHISDYPSDRETGWSEELQGVTHDDNNWFITQRDRLW
                     KMRVTVDLNSAINGPDPNRGIFNVPIPPELKAYNHMGDPDHFEGHLFVPVEKIDSTRV
                     ASIACIDAETLRFIGSALVREQREHASWCAVNPADRFLYSSTFDNNTSINAYEFTIDA
                     AGFKIKLHHKISLTDRGRSFTLNGIQGGVFSVDNAENFLYLSSNDDDSRGVHVFRWPD
                     GKRVQTISIPRDFFGAGEEIEGLTFWDLDGGIAPGIRGQLHVLELDNDSAFPPDDVKG
                     FKHYRLIQFPFVANSNPRCREVHRSDCRFIDLMKSEHKVGYRSFRKALDDRYDACHFC
                     IGGKFDRR"
     gene            complement(4727..5548)
                     /locus_tag="VEV83_05135"
     CDS             complement(4727..5548)
                     /locus_tag="VEV83_05135"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK44526.1"
                     /translation="MAGNLNFHEPIFSHVEPVLAVQDITVTIQYWQDVLGFPNKWTWG
                     DPPVHGGISWQKVFVQFTLNPERATASKGNSIWIRLKHVNSLYDLHTKNNADIVSPPE
                     DKPWGMTEYVVREINGYYLHFAGVTAERKGSGQGLRGTIQIVSRKPSITEYRHLASSV
                     GWSASNDDAVIETILAAPVFAVVAEDSSVHETVGCALLLGDNATFYYVKDVMVHPSLQ
                     RNGIGTAMMRMIADWLQTNAANNALAALISGETLETFYQQFGFAPAFSMVRYIHR"
     gene            5742..5909
                     /locus_tag="VEV83_05140"
     CDS             5742..5909
                     /locus_tag="VEV83_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44527.1"
                     /translation="MKKIRLSTNFAIFLLFFGVATLEAFETRNWLKAAFWAAIGIAFL
                     IADNVKEVTKR"
     gene            complement(6780..6902)
                     /locus_tag="VEV83_05145"
     CDS             complement(6780..6902)
                     /locus_tag="VEV83_05145"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYK44528.1"
                     /translation="MFVSSLSGQHLDRLVIKNNKVTGEERLLSDKNNRIRDVTY"
BASE COUNT         1890 a         1514 c         1545 g         1959 t
ORIGIN      
        1 catgtacttg tgattcgcgg cactaatctc tcaaaaaatc aaaatcatga aacgtaccat
       61 caaatatgca gtcgccgtgt ctttaatgtg tactgtgttt gctctgacgg caaaggcgca
      121 gcaaaaaaat tacaacgtcg cgatctttct ttacgacaaa gtggaactgc ttgactttgc
      181 cgggcccggc gaagtttttg cgtcgacgaa tgggtttcac gtatacacag tttctgcaga
      241 cgggaaagaa attcggtcac agggttttgt gaccgttaaa cccgagtatt ctatcgataa
      301 tgcaccaaag cccgatatca tagttttccc gggcggaaat acttcagcct cgcaaaagga
      361 taaaaaagtt cttgaatggg tcaataagac gatagcggat ggaaataccg tcatgtctgt
      421 ctgcaccggt gcggcgattc ttgctaaagc gggattgctt gataacctca ctgttactac
      481 acaccacgga tttatcgaag gcttgcaagc gatgctgccg gatggcaaag tggtgacaca
      541 aactcgtttc gtcgataacg gaaatattat tacgaccgca ggtgtatcag caggtattga
      601 tggagcgctg catatggtgg caagaataaa agggcaggat gtcgccgatg caacagcgtg
      661 gtacatggaa tacgaaaaag gaattcacgc tgaaggaaag gtggtgtaca aaaatcctta
      721 catcgaaaaa atgaaaacgc ggtccggaac gcaggtgaac tatagcacgg caagcgcttc
      781 aattccttac gagggtgagt tgaccgatct ggcgaaacac ttatggactg aaggcatgta
      841 cgaacaggag gcgaaagttt tggaggacgc agtaaaatgg tacccggacc aaagcacctt
      901 ttacaccctg ctttcggatg tgtaccataa attaggaaag acggcgccga tgaacgaaac
      961 tgcttttatc aaattgctcg acgagggcag ggttgacgaa gctgttgcgg tttatgaaaa
     1021 gggtcgcaaa gattttccag ggtggaagat ctttggcgaa gacgcagtta accaggcagg
     1081 ctacagggcg ttacagaaaa acgattacgc gaatgcaata aaaatatttg aactgaatgt
     1141 ttctgcgtat cccggttcag gcaatgttta tgatagcctt ggcgaagggt tcctaagagc
     1201 aggggacaaa aagaacgcgc ttatctatta tcagaaatct ttggacatcg accccgcaaa
     1261 tacaaatgcg aaagacgtga taaaaacatt gttgtaaaca tatgcgtacg tgtctgacac
     1321 tttcaaagtg tctgacacct tacttttcca aaggaaacct gcaatgtttt tttgcaacgt
     1381 ctccttggcg ttttccgaag ccttacaaac gtcgtttctt ttgaaccaca aagtcgccaa
     1441 ggcactaagg gccaccaaga attttcgtta aagcatcagg ggtgctgatt tttcaggaat
     1501 aaaaacaaat caaaaaaaat tccgtgcctg aaagccgggt gatgcgtgtt ttttcttcgt
     1561 gaaactttat gccttccagt cttggtggtt ttgtaagtcc gctaaaaaat tagttcaagt
     1621 taaatgctgc tcaccttatc gcccagatcg ctcaaagcgt tccgaccgtt cctattttaa
     1681 cggctgccct gtttttacag agttgataac ttccatcaca gcgttgatca caagctccgg
     1741 ttctgttaaa tgaatttcat gcgggctctt agtagttacc acatgtttgc tgtttgcaga
     1801 cagtgcggct atccggtcct gctgctttgc tttttgttgg atcagttcgt tgcgcacgga
     1861 gtcgcccaac gactgcgggt aatcgttcct caggctggtt agcacgaaca aaggtttatt
     1921 gcctaaagaa taagttgaat cggtgtacat cgcctcaaat tcttccgccc aatactgacc
     1981 attatccgcc aataaaacct ttggttgttt ttgtgcccac attcttgctt gttgatattt
     2041 ttccggcaac ttatcgaacg gaggatcaat gcccggttgg ccgatcattt ttagaaaatc
     2101 atccatgtct ttttttgaag gaatttttgt aaatgtatct accgatgttt ttatgggagg
     2161 aagttccctg ttttgggtca gcgacctgag ccgggtgatc ttattattta taaaaagcaa
     2221 cacgtcttca gaagtgccgt caacttcaac aaggcctttc acttcgtcgg gatatttttt
     2281 ttcaaacaac ctggcaataa aaccgccgag cgaatgtccc actaaaacat aaggtggttt
     2341 aacgccggcc ctttctaata acaagtgcag ttcgtacaca tcctgctgaa gtgatctcgg
     2401 catgggaccc ggatcgctcc atgcaagcgc gggcctgtcg tatgttactg cggtggtgat
     2461 gtttgctatt tcgggtgcga ctaatgccca gtcaaaagaa aatgcttgtg aacctgcgat
     2521 aaagatcacg gcaggacttc cggttccatg cacatcaata tgcagacgat agcccccgat
     2581 gtcgatgaac ttgccaggtg gatctggcgt ttgcccgatt gcaaaaaatg ctttcacgaa
     2641 aaccaacagc agtaacagat tttttttcat aaaatcaatt tgtaaatgct tattacgata
     2701 actgtcgtac ttttagccaa aacaaattta aaagggaaag agaaaattta atgatcaatt
     2761 attagctgag tggtcaacag ttagcgactc acattaactt tctaaactgg ttgggcgtaa
     2821 ttccttttac tttcctgaag cttcgaataa agttgctggt atccgaaaac cccgaagcga
     2881 aggctacctc cgcgagaggc atattctttt tcgaaagaaa ttttagtgct ttctcaacgc
     2941 gcaagtggcg cacgtggtcg ccaaaactcc gatgataatg ccgcggaaat tcttttgaca
     3001 gtgtcacagg gtgaatattc aactgcttcg cgacagccgt taaagttaac ttgttatctg
     3061 tgcaatcgtt ttgcagctcg tcaaattttt tcacccacgg cggaatgcag tttcgatctt
     3121 gtgaattcct cgacaataaa ttccacatgt acagtaagag attttcaact gagtcgcccg
     3181 taaactcatc gcgtatctca aattcctgca acatgtgggc aaacgtgttt ttgggggtcg
     3241 gatccttgat cacatccgct ttcacgtttt tcgatacgag atcgttatcg tgaaaccatg
     3301 tattatcaat ctcaacatga aatattctgc acccggtcga gtagcgttga ttgcaatgag
     3361 gctccatcga gcgataataa agcaaggtcc ctggtgaaga cacgatctcc cgtgactcgc
     3421 gacgttctga attactccct ttcaggaaat acgcaaagaa tgcattttga tgacagtgcc
     3481 aatcttttgc ctcactactg cagtaggttg ttttggaaaa gatcaactta ttatgtgtgt
     3541 acgattcggt ttttgtgccg agatattttc cggccgggag aatgcgcata gcaatttttt
     3601 ctgaagttac gatccatgaa aatatccctg cttccccttt gtgtaaaatg ggaaagaatt
     3661 agacctaacg ccggtcgaat tttcctccga tacaaaaatg acaggcatcg tatcgatcat
     3721 caagcgcttt tctgaaactt cggtatccaa ctttgtgttc gctcttcatg aggtcaataa
     3781 atctgcaatc ggaacgatgc acttcccggc accgcggatt tgagttcgcg acaaaaggaa
     3841 actggatcaa ccgataatgt ttgaagcctt tcacatcgtc tggtggaaaa gctgaatcgt
     3901 tatccagttc gagaacatga agctgcccac ggatccccgg cgcaatccct ccatccagat
     3961 cccaaaaagt gagtccttca atttcttcac ccgccccgaa aaaatcgcgc gggattgaga
     4021 tggtttgaac gcgctttccg tccggccaac gaaatacgtg cacaccgcgg ctatcgtcgt
     4081 cattcgacga caggtaaaga aagttttccg cattgtcaac agaaaatacg cccccctgga
     4141 ttccgtttag cgtaaaactt ctgccacggt cggtcaaact tattttatga tgcagtttta
     4201 ttttaaatcc tgcagcatca attgtaaact cataagcgtt gatagaagta ttattgtcga
     4261 aggtcgagct gtataaaaat cgatcggccg gatttactgc acaccaggat gcgtgttcgc
     4321 gttgttcacg caccaacgca ctaccgataa accggagcgt ttctgcatca atgcaggcaa
     4381 tgcttgcaac ccttgtgctg tcgatctttt ccaccggcac aaataggtgt ccttcaaaat
     4441 ggtcagggtc gcccatgtga ttatacgctt tgagttcagg tggtatcggc acgttgaaaa
     4501 ttccgcggtt cggatcagga ccattgattg cgctgttaag atctacggta acgcgcatct
     4561 tccaaagccg atctctttgt gtgatgaacc agttgttgtc gtcatgcgtt acaccctgca
     4621 actcttcgct ccaacccgtc tcacggtcgg aaggataatc ggagatgtgt ctaaaaaaag
     4681 gtgagaatgg catatcatag attttttggt gacgaccggg gcggtcttag cgatggatgt
     4741 agcgcaccat gctgaatgcc ggtgcaaaac caaactgttg gtaaaacgtt tcaagcgttt
     4801 ctcctgatat gagtgcagcc aatgcgttat tggcagcatt cgtttgaagc cagtcagcga
     4861 tcatgcgcat catggccgtt ccgattccat ttcgctgcag gctcggatgc accattacgt
     4921 ctttcacata ataaaaagtt gcgttgtcac caaggagcaa agcacatccc acagtttcat
     4981 ggacggagct atcttcggca actacggcaa atacaggcgc tgcaaggatg gtttctatta
     5041 cagcgtcgtc gtttgatgca gaccaaccaa ctgaacttgc caggtgtctg tattcggtaa
     5101 tcgatggttt tcttgaaacg atctgtattg ttccccgcaa gccttgtccg ctcccttttc
     5161 tttctgcggt cacgccggcg aaatgcaggt agtaaccatt tatttcacgt accacgtatt
     5221 cagtcattcc ccacggtttg tcttccggcg gtgaaacgat gtctgcgttg ttctttgtgt
     5281 gtagatcgta caaagagttg acatgtttaa ggcgtatcca aatcgaattt ccttttgagg
     5341 ccgtcgcccg ttccggattc aaagtgaact ggacaaaaac tttctgccat gaaattcctc
     5401 catgcacagg tggatcgccc catgtccatt tattcggaaa accgagaacg tcctgccaat
     5461 actggatcgt cactgttatg tcctgcacag caagtaccgg ttcaacgtga gagaaaattg
     5521 gttcgtggaa attcaggttg cctgccattt catgcgggct ttagttctcc aaatctaatg
     5581 attattattc ccaaatgttg ccggttgtcg gtcgcccggt caccggtagc tggtaactgg
     5641 taaccggcaa ctggtaaccg gcaacttcat tcacaatgct tattcatcgc ctgaccctcg
     5701 tcattctttt tcttacatcc gcttcgtagc ttagcaatgc catgaagaaa ataaggctca
     5761 gtacgaattt cgcaatattc cttctctttt ttggcgtggc gacgctggaa gcatttgaaa
     5821 cacgcaattg gctgaaagct gctttttggg cggcgatcgg tatagcgttt ttgatcgcag
     5881 ataatgtgaa agaagtaacg aaacgttgaa ggattggtgg gcggagggtt gatttgtgat
     5941 cgctgatgtc tgatctctga tgtatgatct ctgatctctg atgtatgtaa atcccaaatc
     6001 tctcatctgc aatcctgaat ttgggaattc tcaatggtga attgtgaatg agcgtacgaa
     6061 tttctcgata acctaattaa gacagttccg cagtatatat ggtgataact agaaattgta
     6121 aattgtaaat cctaatacgt aaatcccaaa tcctaaatct gccatctgca atcctgaatt
     6181 tgggaattgt caatgatgaa ttgtgaatga gcgtatgaat ttctcgataa cctaattaag
     6241 acagttcggc aggatatatg gtaataacta gaaattgtaa attgtaaatc gtaattcgta
     6301 aatcccaaat cctaattctg ccatctgcaa ttctgaattt gtgaattgtc aatggtgaat
     6361 tgtgaatgag cgtatgaatt tctgaataac ctaattaaga cagttccgta atgggataaa
     6421 catgatcaca gatgagtgtg atgatgagga taatctctga tctctgatct ctgatgtatg
     6481 taaatcccaa atcccaaatc ctaaatccga aatctgcaat cctgaatttg tgtattgtca
     6541 atggtgaatt gtgaatgagc gtatgaattt ctcgataacc taattaagac agctgtgtga
     6601 taagctaatg ggataaataa taatgatcac agatgagtgc gacgaagaaa ttgtaaatcg
     6661 taattcgtta aatcccaaat cctgaatgtg caatctgcaa tcgccaatct gtaatctcat
     6721 catttcttgc tgatgcgata gatatcgcca tcatccgtta tagcaaacaa catattgttc
     6781 taataggtta catcgcggat gcgattattc ttatcagaaa gtaatctttc ttcaccagtt
     6841 accttgttgt ttttgatcac gagcctgtca agatgctgcc cgctgagcga cgaaacgaac
     6901 aaattatt
//
LOCUS       DASQJI010000168         3850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_168994,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000168 DASQJI010000000
VERSION     DASQJI010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168994"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /locus_tag="VEV83_05150"
     CDS             complement(<1..1250)
                     /locus_tag="VEV83_05150"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HYK44529.1"
                     /translation="MKTNMRLILLLAPAFLFCSLTPANATIYPVTNTNDAGAGSLRQA
                     ILDANANPGLDNINATGVTGTINLSTGQLAITDALTITGPGATLLDVHNLSFITGESR
                     RVFFIGNIAVTFSGLTISGGATSGYGNYSLLDGGGIYNSGQLTITNCAISNNVVYGCS
                     NCGTFGDGGGICNTGTLTITGSVINNNQVGFGGDFGTANGGGIANKGGTVTINNSTIS
                     GNSSSSGAGIYNGGPTTINNSTISTNTAGVGGGIQQNNGKLIVTNTTISANVAGNGGG
                     INYSSDSCRITNCTVTGNDGYGGGIYDHQYALSGVVPPNVFIIQNSIVAGNTNSRNGS
                     LGADYYFPSDESIPPAGYANLTSLGHNIFGKVDAPWNWTFTGTGDQAGTYPSPIDPLL
                     GSLADNGGPTFTHALLTGSPAINTG"
     gene            complement(1886..3019)
                     /locus_tag="VEV83_05155"
     CDS             complement(1886..3019)
                     /locus_tag="VEV83_05155"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK44530.1"
                     /translation="MKNQNIMRLFTLIILLFLVNCTETTSTKSESYQAGFKTIHAIDK
                     SRIYKQNTDTTDYLHYRPIDIDIWYPADSSATDTLLLVRDLLGLLEQRANYYTASNTG
                     NGIAGQIAQLFCTGFKCSDSTKLLSFKTNSFKNAAAANGNFPLIIYMTAFNGMSYENF
                     ALFESLAKKGFVVVSISSIGRFPGDMTMKREDLMEQVNDGVISLNTLKQNPNIDFNKI
                     GIVGYSWGGLAGVVLADKVPNVRCLVSYEGSEFHHYGNAKDENADFNIIRSSKEFKDI
                     HLTIPYLRLESAPSTQPDKIDSVYSFYPNHVNNAQVFTIDSMQHEDFDCFSFVVRKSG
                     NCLINQRYNTALTLAVSFLEDNLKNENHFSTTVREMNNITRKK"
BASE COUNT         1147 a          801 c          756 g         1146 t
ORIGIN      
        1 cccgtattga tagcagggct gccggtaagc aatgcatgtg taaatgttgg tccaccatta
       61 tcagccagcg accccagcaa tgggtctatc ggggatggat aagttcctgc ctggtcgcct
      121 gttccagtga aagtccagtt ccacggggca tctaccttgc caaagatatt gtgcccaagc
      181 gaggttaagt ttgcgtagcc cgcgggcggt atactttcat cgctgggaaa atagtaatct
      241 gctcccaggc tcccgttgcg actattggtg tttccggcta caatagaatt ctgtatgata
      301 aagacattcg gaggaacaac tcccgacagt gcgtactgat gatcgtatat tccgccgccg
      361 tagccatcgt tccccgtaac agtacaatta gtgattctgc aactgtcaga tgaatagttt
      421 ataccgccac cattccctgc tacattagct gagatagtcg tattagttac aattaattta
      481 ccattgttct gttgaatacc gcctccgact cctgcagtgt tggttgagat tgtagagttg
      541 ttgatcgtcg tcgggccacc gttatagata ccggcgccgg aagaagaact gttgcccgaa
      601 atagtggaat tattgatagt taccgttcct cccttgttag cgattccacc gccattggca
      661 gtgccaaagt ctcctccaaa gccaacctga ttattattga ttactgaacc ggtaatcgtt
      721 aatgtcccgg tattacagat gcctcctcca tctccaaaag tgccgcagtt tgaacagccg
      781 taaacaacgt tgttagaaat tgcacagtta gtaatagtta attgaccgct attgtaaata
      841 cctccgccat ctaatagtga gtaattacca tatccactgg tagctcctcc ggaaatggtc
      901 aggccggaaa aggtcactgc aatatttcct ataaaaaaga ctcttctgga ctcgcccgtt
      961 atgaaagata aattatgcac atcgagtagc gttgctccag gtccggttat agttagtgcg
     1021 tccgtaattg caagctggcc tgttgataaa ttgattgtac cggtaacccc ggtcgcattg
     1081 atgttatcta aaccgggatt cgcattagca tcaagtattg cctgccttag tgaaccagca
     1141 ccagcgtcgt ttgtattcgt tacaggatat atagttgcat ttgcgggtgt caatgaacaa
     1201 aacaaaaaag caggcgcaag cagtagaatt agtcgcatgt tcgttttcat aaagcagttt
     1261 tatacgtttg ggaaattgtc ggtttagaaa aatggaggcg ccggaaggta tcgaacatta
     1321 tgcacagcaa aagatatatt atcgttgcct aacaggcaga tgcgcatttc atgtttccgc
     1381 ctgcttcttg attcatgtta gtcgttacct ccctaattca aaaacaacat gagccgccca
     1441 ggcaaaaagg attcggtctt tccagcatcg agcggctttt tcttagaatt tatatgtgag
     1501 ttaaacaagg tggtaaatct taaaaatcgc gatcgtattg aaaaaccaaa cgattagcat
     1561 gtaacccgct tggattatga gatatttccg gcgagcgggt tttttctgcc catcaggtac
     1621 attacctgcc cgtttgcacg ggcagtttat taagaattgc attaagtacc cccgggagtg
     1681 gcgatctctg tacaattgtt ttttccgcgt cttcttggtt ttggcttagg gaaaagtacg
     1741 ctcataaacc agcgatactt ttcaaggtta ggatatgagc atttagctgt ccgttttcca
     1801 agaaccaccg cataattgaa aaatgaaagt tgaaagacac gttacatcag cctgcatttt
     1861 gacaataccg ctgttgtgcg atgttttatt tcttcctggt tatgttattc atttcccgaa
     1921 cagttgttga aaaatggttt tcatttttaa ggttgtcttc caaaaagcta actgctaatg
     1981 tcaaagccgt attgtagcgt tgattaatca gacagttacc agactttctc acaacaaatg
     2041 aaaagcaatc aaagtcttcg tgttgcattg aatcaatagt gaaaacttga gcgttgttaa
     2101 catgattcgg ataaaagcta taaactgaat ctattttatc cggttgggtt gaaggagcgc
     2161 tttccaaacg cagatatgga attgtaagat gtatgtcttt aaattcttta ctgcttctaa
     2221 ttatattgaa atcagcattc tcatcttttg catttccata atgatgaaac tctgaacctt
     2281 cataagaaac caaacaacga acattgggca ctttatcagc taaaacaacc ccagctagac
     2341 caccccaact ataaccaaca ataccaattt tattaaaatc aatattcgga ttttgtttta
     2401 atgtgtttaa actaataact ccatcattaa cttgttccat caaatcttct ctcttcatgg
     2461 tcatatcacc gggaaaacgc ccgatagaac ttatggaaac cacaacaaac cctttttttg
     2521 ccagcgattc aaacaaagca aaattttcat agctcattcc attaaaggcg gtcatatata
     2581 ttattaatgg gaagttgcca tttgcagcag cagcgttttt aaaactattt gttttaaagc
     2641 tgagcaactt agttgagtca gagcatttaa agcccgtaca aaacaattgc gctatttgtc
     2701 cggctattcc attgcctgta tttgaagcgg tataataatt tgcgcgttgt tccagcaatc
     2761 ctaataagtc acgtactaaa agcaaagtgt ctgttgcgga agaatctgca ggataccaaa
     2821 tatcaatatc aattggtctg tagtgcaggt aatccgtcgt atcagtattt tgcttgtaaa
     2881 ttcttgactt atcaattgca tgaattgttt tgaagccagc ttggtaagat tcagatttcg
     2941 tacttgttgt ttctgtacaa ttcaccagaa acagcaatat aattagggta aataatcgca
     3001 taatgttttg atttttcaca atgtaatttt ctaaaactta aacattgtta gagttgttct
     3061 aaaaatatgg cacaacgaaa aaatgtattg atggcggaat tgtgagcaac taaaaataaa
     3121 ttataggtat atttactaac cagtaattca tttccactac tcactcttct ccattctgct
     3181 gacaactatt gaaacaacac atagttattc gctaaaccgt ttgaacactt aatctgatac
     3241 aatgaaaccg aagctgcttt ttaattctaa catcgcaaat aattctttat gctgatgcac
     3301 aaacatattt tcaccataga tcgggtaagt atggcgttaa agatgctgca ggaaacgtga
     3361 tcgttgcacg aaatacagtg cttgattggc tcatcaacgc taatctcttc ttttggcttt
     3421 attatctaca agttagctcg agccaacgct cataatacac cgcctatgcc ggtgaatatg
     3481 gacggcacga ttgcagcgtg tgtaatcgat gagcacttga ataagatcat tccaaaaaat
     3541 caggacggta gcatcaacat ccgactgtgc agtttataac cttcccgatt tttcgttcta
     3601 ccaaatcata ttcaaactca gcaacaataa ttcttacata atggaacaac attgtcagag
     3661 cttgacaagt tgcaaacatt gataactccg cggttggctg aatacagaca agcagtaggg
     3721 ataagaagaa gtttgaagag gtgaaaacaa tctatgttga gatgaaggaa ctgcaaaaac
     3781 aagcaaccgc cccaatacaa aaggctcaca gattgcactc tgaaggttct caaaaaaacc
     3841 cgtggaagca
//
LOCUS       DASQJI010000169         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2779957,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000169 DASQJI010000000
VERSION     DASQJI010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2779957"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            586..1641
                     /locus_tag="VEV83_05160"
     CDS             586..1641
                     /locus_tag="VEV83_05160"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44531.1"
                     /translation="MRVKLPHYTSKDYVVMVWVMIPLSIILNSVIFGKFYYSQWSVFV
                     PATLITGLAACIDFIGCGAVAVAMKNRFPADNQVVKRLTFMIGIFLIVSGLFLFLLFS
                     GYEWIHFHGYTFNENGFIGAYISMGTVNIFLTFLHEAISRFERWKANVKETEELKKTV
                     LQSQLLGLKSQVNPHFLFNSLNSLSSLINESPDDAEAFLDEMTKVYRYMLRNEEILVP
                     LEKELQFIRSYDALLKARYGDAIQVQIDIKPECKPLLLPPLSLQVIIENAFTQNMHTK
                     SAPLTIRIRSENDMLIIRNNIQRKIMTTDADFEAGLDNLVSRYKLLSGQPLVIRDLKS
                     ERIIELPLLEKELEVVA"
     gene            1638..>2462
                     /locus_tag="VEV83_05165"
     CDS             1638..>2462
                     /locus_tag="VEV83_05165"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44532.1"
                     /translation="MNSWLKPTRTEWITFFILMPAINIVALYIMFGKRLWHDGNLWLY
                     AFWIGYFVGLVTWYLLVITMHKFQALMPELRQTPKRVTFEAICFTIITSIVFGFVFWG
                     YDALRLFGFEATMLQFKLSIGVVLGTVMLTASLWESEYIYKKYKESFIEKETMQQLGM
                     QQEFDSLRNQINPHFLFNCFNTLSSLISEDREQADAFLNELSKVYRYLLQNNEEGLST
                     LQDELNFIHSFYKLLKTRHGDAIELQIEVDKKYSNYLLPSLSLQLLVENAVKHNVVS"
BASE COUNT          697 a          482 c          566 g          717 t
ORIGIN      
        1 atccgcaaag ccacgaatta aaaatgatga tcgaaacgga aaaaatcctg gtgaagttga
       61 gcttgaatct caggaaagcg atcaattgat gagatgagtg atgagtggag aaagcttaag
      121 tgagtttgaa tcctttcaaa atcctgaatc gtaaatgtga attgtgaatt ggtgaattgt
      181 caatcgtatg cgtctcaaaa tcctaaattg caaatccaac tcctaattct taccagatta
      241 tggaaacttc tttgccgaaa gtgatcccgg taacgcgaac aatttgtcgc ggcatgtcag
      301 ggaattttga gcgtggtgct cgacatttct tcggatgtgc tggggctgtt tggacctttc
      361 agaatcgagc tgcagaaaca atagcgtctt tagtttttga tgttaagcaa agctgtcttc
      421 agagatttct ctgcaaggca gcttccgctt tacactggtt tgagaatgat catctgttga
      481 ttcctcacag ttgatgcatt gttttactca attcatcccc cggttaattt aattcatcca
      541 gttacctgcg gcagccaatc atataaaatc ggtaatttgt aaactatgcg ggttaaactg
      601 ccacattaca ccagcaaaga ctatgttgta atggtctggg tgatgatccc tttgagcatc
      661 attctcaaca gtgtgatctt tggaaagttt tattatagcc agtggagtgt atttgtgcct
      721 gccacattga tcactggcct tgccgcctgc attgatttta taggttgtgg tgcggtggcg
      781 gtcgcgatga agaaccgctt tccggcagat aaccaggtag tgaagcggct tacttttatg
      841 atcgggatct ttcttattgt ctccgggctt tttcttttcc tccttttttc agggtatgaa
      901 tggatacatt ttcatggata tacttttaat gaaaatggtt tcatcggtgc ttacatcagc
      961 atgggaacgg taaacatatt cctcacattt ttgcatgaag ccatttcaag atttgagcgt
     1021 tggaaagcaa acgtaaaaga aacggaagag ctaaagaaaa cggtgcttca aagtcaactg
     1081 cttggcttga aaagccaggt aaatccacac ttcttattca atagcctcaa ctcactttct
     1141 tcgctgatca atgaatcgcc tgatgatgct gaagcatttt tggatgagat gaccaaggta
     1201 taccggtaca tgcttcgtaa cgaagagata ctggttccgc ttgaaaaaga attgcaattc
     1261 attcgctcgt atgatgcgtt acttaaagca cgctatggtg atgccatcca ggtgcagatc
     1321 gatataaaac cggaatgcaa gccgctgctt ttacctccgc ttagcctgca ggtgatcatt
     1381 gaaaacgctt tcacgcaaaa tatgcatact aagtcggccc cgttaacaat caggattcgc
     1441 tcggagaacg atatgttgat cattcgaaat aatatccagc gaaagatcat gacgactgat
     1501 gccgatttcg aagccgggct cgataacctg gtaagcaggt ataagctgct gagcgggcaa
     1561 cctcttgtaa ttcgcgactt gaaaagtgaa cgcattatag aattaccatt gttagaaaaa
     1621 gagctggagg tagttgcatg aacagctggc tgaaaccgac aagaactgaa tggatcacct
     1681 ttttcatttt aatgccggcg atcaacattg tagcgctgta tatcatgttt ggtaagaggt
     1741 tatggcatga cgggaacttg tggttgtatg ctttttggat cggttatttt gttggactgg
     1801 taacatggta cctgctggtg atcacaatgc ataagttcca ggcgctaatg cccgagctgc
     1861 ggcaaacgcc taaaagagtt acgttcgagg caatttgttt caccattatc acatcgattg
     1921 ttttcgggtt tgttttttgg ggctatgatg cgctccggtt gtttggcttc gaagcaacga
     1981 tgctccaatt taaattatcc atcggcgtag ttctgggaac ggtgatgctc acggcatcgt
     2041 tgtgggaatc cgaatatatc tacaagaaat acaaggaaag ctttattgaa aaagaaacga
     2101 tgcaacaact gggcatgcag caggagttcg acagtcttag gaaccagatc aacccgcact
     2161 ttctttttaa ttgcttcaat acattatcgt cgctgataag tgaggatagg gaacaggcag
     2221 atgcattttt aaacgagctc agcaaggtct accggtatct tttacaaaac aatgaagaag
     2281 gattgtcgac gctgcaggac gaattgaatt tcatccattc attttacaaa ttattaaaaa
     2341 cgagacacgg agacgccata gaactgcaga tcgaagtcga taaaaagtac agcaattacc
     2401 tgctgccctc attgagtttg caattgcttg ttgaaaacgc agtaaagcat aacgtggtgt
     2461 cg
//
LOCUS       DASQJI010000170         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2472657,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000170 DASQJI010000000
VERSION     DASQJI010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2472657"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..513)
                     /locus_tag="VEV83_05170"
     CDS             complement(103..513)
                     /locus_tag="VEV83_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK44533.1"
                     /translation="MTKPRKRSDCPVSTSLDIWGDKWSLLIIRDLMFAKQCTYGDFLK
                     APEGIATNILASRLQALEENKIIEKLDHPESKAKVLYRLTRKGIDLLPVMIEINLWAE
                     KYFPVPADRKAMLKEVKKDKTAFIKSLTKELEKQ"
     gene            602..1408
                     /locus_tag="VEV83_05175"
     CDS             602..1408
                     /locus_tag="VEV83_05175"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK44534.1"
                     /translation="MKQTILVTGASSGFGLLIANKLHESGHHVIGTSRNPEKYDGELP
                     FKLLELDIADDDSIESFSQQLFGHIRKLDVLINNAGYLLTGLAEETSIEIGKQQFETN
                     FWGTVKLTNELLPYFRKQKQGKIITVGSLLGLVSLPNVAYYAASKHALEGYFKALRIE
                     LKQFNIKVSMVEPSTFKTNIGNSASNVKGDIRDYDVFRQKMTSYTKTQFEQAPGPEPV
                     MNTVLKIVNERNPKYSHPVGKGASLILTLQRFAYTLLENTVLKNVNAAKI"
     gene            1418..2419
                     /locus_tag="VEV83_05180"
     CDS             1418..2419
                     /locus_tag="VEV83_05180"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HYK44535.1"
                     /translation="MKAFIVKRYGKKEKLQLTDVAEPVVKENDILLRIHAAGVNLLDS
                     KIRNGEFKMILRYETPFVLGHDVAGVVIKIGSKATKFRAGDEVYARVADYRIGTFAEL
                     IAINENDAALKPKNLSMAEAASIPLVSLTAWQALVEKAKLKKGQKVFIQAGSGGVGTF
                     AIQLAKHLGAMVATTTSATNINLVKSLGADIIIDYKKDDFETVLRDYDVVLNSQDAKT
                     LKKSLQILKPGGKIISISGPPDPAFGRQINANWFLKIILQFLSAGTRKKAKRRGVDFS
                     FLFMRAQGEQLSQITKLIESGVVKPVMDRVFPFEQTNEAMAYVETGRAKGKVVVKVN"
BASE COUNT          763 a          447 c          515 g          705 t
ORIGIN      
        1 gattatttca gtgagccttt ttttattttt cgttcatgtt tccggttggg gcgaggaccc
       61 tgcaggaaaa aatgggattt gctatcctaa aaatcttttc ttttattgtt tctctaattc
      121 ttttgtcagt gatttgataa atgcggtctt atctttttta acttctttca acattgcttt
      181 tctatctgcc ggaacgggaa agtatttttc agcccataag tttatttcaa tcatcacagg
      241 aagtaagtca attcctttcc tggttaaccg gtataacact tttgctttgc tctcggggtg
      301 atctagtttc tcaatgatct tgttttcttc gagtgcctgt aatcttgaag cgagaatatt
      361 cgtggctata ccttccggtg cctttagaaa atcgccatac gtacactgtt ttgcaaacat
      421 caggtccctg attatgagga gagaccactt atctccccag atatcaagcg aagtgctaac
      481 cgggcaatct gacctttttc ttggtttggt cataaaaatt ttttccaaat cacttgcaat
      541 ttgcaagtaa agtatatatt tgcacttgca aaatgcaagt aaaattacaa aacaagaaga
      601 aatgaaacaa acaattttag taaccggggc ttcttcagga ttcggacttc ttatcgccaa
      661 taagctccac gaaagcggcc accatgtaat tggtacaagc cgtaatcccg aaaaatacga
      721 tggggagctt ccttttaaac tattggaatt ggatattgca gatgatgatt caattgaatc
      781 ctttagccaa caactgttcg gtcacatccg caagttggat gtgctgatca ataatgccgg
      841 ctacttattg acaggacttg cggaagaaac ttccatcgaa ataggaaaac agcaatttga
      901 aaccaacttt tggggcaccg ttaaacttac aaacgagtta ctgccgtatt tcagaaagca
      961 gaagcaaggc aaaataatca ctgtaggttc attacttggt ttagttagcc ttccgaatgt
     1021 cgcttattac gcggcttcaa aacatgcttt ggagggctac ttcaaagcct tgcgaattga
     1081 attaaagcaa ttcaacatta aggtaagcat ggttgaacct tcgaccttca aaaccaatat
     1141 cggcaacagc gcatccaatg taaaaggaga tattagagat tatgatgtat ttcgccaaaa
     1201 gatgacctct tatactaaaa cacagtttga gcaagcaccc gggccggaac cggtgatgaa
     1261 caccgtgttg aaaattgtaa acgaacggaa tcccaaatac agtcatcctg tcggtaaagg
     1321 cgcttccctg attcttacgt tacaacgttt tgcatatacc ttacttgaga atacagtatt
     1381 gaaaaatgta aatgcagcaa aaatttagac aggacaaatg aaagcattca tagtaaagcg
     1441 atacggtaaa aaggaaaaat tacaactcac tgacgtggca gagccagttg taaaagaaaa
     1501 tgatatcctc cttcggatac atgcggcagg tgtgaatctt cttgattcaa agatcaggaa
     1561 tggtgaattc aaaatgattt tgcgttatga aactccattc gttttagggc atgatgttgc
     1621 gggcgttgta ataaaaattg gctcaaaggc tactaagttc cgggctggcg atgaagttta
     1681 tgcaagagtt gctgattata gaattggaac ttttgccgaa ctgattgcaa tcaatgaaaa
     1741 tgatgcggct ctaaaaccaa aaaatctttc tatggcagaa gcagcttcta ttccgttagt
     1801 tagtttgact gcatggcagg cgctggttga aaaggcaaag ctgaagaaag ggcaaaaagt
     1861 tttcatccag gccggttcag gtggtgtggg cacatttgca attcagctcg caaaacattt
     1921 aggtgcaatg gtggcgacta caacaagtgc aaccaatatc aatttggtaa aaagtctggg
     1981 tgcagatata ataatcgatt ataagaaaga tgattttgaa acagtactta gggattacga
     2041 tgtagtgttg aatagccagg atgcgaaaac gcttaagaaa tctcttcaaa tattaaaacc
     2101 cggcggaaaa attatctcta tttctggccc gcccgaccct gcttttggac gacaaattaa
     2161 tgcgaattgg tttttgaaaa taatattgca atttttaagt gcaggaacca ggaaaaaagc
     2221 aaaacgtcgt ggcgtagact tttcctttct ttttatgaga gcacaaggag agcaattgag
     2281 tcagattaca aaactaatag agtcaggcgt cgtaaaacct gttatggatc gagtgtttcc
     2341 atttgaacaa acgaatgaag ccatggcgta cgtagaaacg ggtagggcaa aaggaaaggt
     2401 tgttgttaag gtgaattagt ttgcagaaac
//
LOCUS       DASQJI010000171         3760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_322798,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000171 DASQJI010000000
VERSION     DASQJI010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322798"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VEV83_05185"
     CDS             complement(<1..401)
                     /locus_tag="VEV83_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44536.1"
                     /translation="MKLTIYRIFSFLLLPIALLFAISVLLFIRAALANPGMLIPLFII
                     ACVTIYSFAALNFLIKGIDGKKYLGRSSKELLKVNAIVSVIFCLLMISQCVVFIIQPE
                     MLHQLAVQAKQNSGDELKIGLDTFENYLRITS"
     gene            complement(512..2347)
                     /gene="aspS"
                     /locus_tag="VEV83_05190"
     CDS             complement(512..2347)
                     /gene="aspS"
                     /locus_tag="VEV83_05190"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HYK44537.1"
                     /translation="MFRTHTCGELTLKDAGSSVTLAGWVQTIRKFGAITFVDLRDRYG
                     ITQLLFGEHLNAQLDTNPLGREFVLQATGNVSERSNKNKNIDTGDIEIVVDSFSILNK
                     SATPPFTIQDDTDGGDDLRMKFRYLDLRRNAVKKNLELRYAVNRSARNYLHENGFIEI
                     ETPFLIKSTPEGARDFVVPSRMNPGEFYALPQSPQTFKQLLMVSGYDRYYQIVKCFRD
                     EDLRADRQPEFTQIDCEMAFVEQHDIINMFEGLVKRIFKEVNGFDYTEPVERMSWEDA
                     MWNYGNDKPDIRFEMKIANLKVPGHVFKNKQIALQNFPLGAKTTGFRVFDEAETVVAI
                     SVPGCSEYSRKQTDELIEWVKRPQIGMAGLAFIKMNNDGTIKSSFDKFFDEERLRTLA
                     EFCQAKKGDLILILAGREERTRKAISELRLEMARRLSLRKKDEFKLLWVLDFPLFEYD
                     DEMNRWVARHHPFTSPKPEDISVMIDNSPLIEDREKYLEHPYADIRANAYDMVLNGNE
                     VGGGSIRIYQRELQEKMFAALGMSKEEAFHKFGFLLGAFEYGAPPHGGIAFGFDRLCA
                     ILGGSEGIRDFIAFPKNNAGRDVMLDAPSTIDDKQLTELQIRLTS"
     gene            complement(2432..3118)
                     /locus_tag="VEV83_05195"
     CDS             complement(2432..3118)
                     /locus_tag="VEV83_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HYK44538.1"
                     /translation="MTDITPHISTELVASGKVETLPVMEAFYTLQGEGFHQGKAAYFI
                     RLGGCDVGCVWCDVKESWDFSAHPQKSIAQIVDEAKSTVGNQSTVNTQLHNKHVCVIT
                     GGEPLMHDLSNLTNLLQETGFATHIETSGAYPLTGSWDWICVSPKKFKRPLKEVLQTA
                     SELKVVVYNKSDFSWAEDNAALVSPQCQLYLQPEWSKANTITPLIIDYIKSQPRWQLS
                     LQIHKYINIP"
     gene            complement(3140..>3760)
                     /locus_tag="VEV83_05200"
     CDS             complement(3140..>3760)
                     /locus_tag="VEV83_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HYK44539.1"
                     /translation="GILVQLPLPKQISEEKVINAIDPAKDVDGFHPFNIGKLVQGYPT
                     FISATPYGILLLLKHYGIGTKGKHAVVIGRSNIVGRPISILLSANRDYGNCTVTVCHS
                     HTANLNEISLQADILICALGRPGFVEANMVKPGAVVVDVGITRVEDASAKKGYRIQGD
                     VKFEEVAPKSSAITPVPGGVGVMTIAALLENTFHAYLQREKFATTN"
BASE COUNT          955 a          889 c          810 g         1106 t
ORIGIN      
        1 gatgtgatgc gcagatagtt ttcgaaagta tcaaggccta tcttaagttc gtcaccacta
       61 ttctgtttcg cctggaccgc cagctggtgc aacatctccg gctgaatgat gaacacaaca
      121 cattggctta tcatcaataa acaaaagatt acgctcacga tggcattcac tttaagcagc
      181 tcttttgacg accggccgag gtactttttc ccgtcaattc cctttatcaa aaaattcaac
      241 gcggcgaaac tgtagatggt tacacacgca attatgaata gcggaatcag cataccagga
      301 ttcgccagcg cagctcttat gaaaagcaat acggatatgg caaacagcaa tgctataggc
      361 agcaacaaaa aactaaagat ccggtatata gtgagtttca ttgaatcgat ttgtatttcc
      421 ggcgaagata tatgaacgca ctgcggtttc ggttaagaga attgtgaaaa gaaatgaccg
      481 gccgggtcag tggcgatatg tgttgcggaa tctacgaggt taacctgatc tgtagttccg
      541 ttaactgttt gtcgtcgatc gttgacggcg cgtccagcat cacatccctg cccgcattat
      601 tttttggaaa tgcaataaag tcgcgaatgc cttcgctgcc gccgaggatc gcgcagagtc
      661 tgtcgaatcc aaatgcaata cctccatgcg gtggcgctcc gtattcgaat gcgcccagca
      721 aaaacccaaa tttgtgaaac gcttcctctt tgctcatgcc taatgctgcg aacattttct
      781 cctggagctc tctttgatag attctgatag accctccacc cacttcattt ccatttagca
      841 ccatatcgta tgcgtttgcc cttatatcag catatggatg ttccaaatat ttttcacggt
      901 cttctatcag aggactgtta tcgatcatga ccgaaatgtc ctccggctta ggcgacgtga
      961 acgggtgatg tcttgcaacc catcgattca tttcgtcatc gtactcaaat aacgggaagt
     1021 cgagtaccca caataatttg aactcgtcct tctttcttaa actaagtcgc ctggccattt
     1081 caagacgcaa ctcgctgatg gctttacgtg ttcgttcttc gcgtccggca agtatcaata
     1141 tgagatcgcc tttttttgct tgacaaaatt ctgcaagggt tcttagtcgt tcttcatcaa
     1201 aaaatttgtc gaaactgctt tttatcgttc cgtcattatt catttttatg aaggcaagcc
     1261 cggccattcc tatttgcgga cgtttcaccc attcgatcag ttcatcagtt tgcttacggc
     1321 tatattcgct gcagccagga acagaaatgg ctaccacagt ttctgcctca tcaaaaaccc
     1381 taaagccggt tgttttggcg cctaacggaa aattctgtaa agcgatttgt ttgtttttga
     1441 aaacgtgccc gggcacttta agattcgcga tcttcatttc aaatcttata tccggcttgt
     1501 cgtttccgta gttccacatc gcgtcttccc aactcatccg ttcgacaggt tcggtgtaat
     1561 caaatccgtt cacctctttg aagatccttt tgacgagccc ttcgaacata ttaataatgt
     1621 cgtgctgttc aacaaaggcc atttcacagt caatttgtgt gaactccggt tgccggtcgg
     1681 cacgcaggtc ttcatcgcga aagcatttga cgatctggta atagcggtcg tagccactta
     1741 ccattaataa ttgcttgaac gtttgcggac tttgtggcag cgcatagaat tccccggggt
     1801 tcatacgact cggaaccaca aaatctcttg cgccttccgg agtcgacttg attaagaatg
     1861 gagtttcaat ttcgatgaac ccattctcat gcaaataatt tcttgcagaa cgattaaccg
     1921 cgtagcggag ttcaagattt tttttcacag cgttcctgcg gagatcgaga taacggaatt
     1981 tcatccgaag atcgtcgccg ccgtcagtgt catcctgtat ggtgaaagga ggtgtagcag
     2041 atttgtttag aattgaaaat gaatcaacga cgatttcgat atcgcccgtg tcgatattct
     2101 tattcttatt gcttcgttca gacacatttc ccgtcgcctg caaaacaaac tcacgaccga
     2161 gcgggtttgt atccagttgg gcgttcaagt gttcaccaaa taataattga gtgatcccgt
     2221 aacgatcacg caggtcgaca aatgtgatcg ctccaaattt ccggatagtt tgcacccagc
     2281 cggctaatgt aaccgacgac ccggcatctt ttagtgttaa ttctccgcat gtgtgtgtcc
     2341 taaacataag ccaactctaa aggaattttt ttggctggca aagataagcg gattgattgt
     2401 cgaaagctaa gggagttgtc tttcggattc cttatggaat atttatgtac ttatgaattt
     2461 gcaaactgag ttgccagcgc ggctgcgact ttatataatc aataattaat ggagtaattg
     2521 tgtttgcctt gctccattcg ggttgaagat atagttggca ttgcggtgat accagtgctg
     2581 cgttgtcttc tgcccaactg aaatcagatt tgttataaac cacaactttc agctcactgg
     2641 ctgtttgtaa aacttctttt aacggacgtt tgaatttttt cggagatacg cagatccagt
     2701 cccatgaacc tgtgagcggg taagcaccag atgtttcgat gtgggtggca aaaccggtct
     2761 cctgtaacaa attcgttaag ttggaaaggt catgcattag cggttcaccg ccggtaatga
     2821 cgcaaacatg cttgttatga agttgagtgt tgacagttga ctgattccct acggtcgatt
     2881 tggcctcgtc aacgatctgc gcaattgatt tttggggatg ggccgagaaa tcccagcttt
     2941 cttttacgtc gcaccagaca catccaacgt cgcagccgcc gagtcggata aaataagcgg
     3001 ccttgccctg gtgaaatcct tcgccttgca gtgtgtaaaa cgcctccatt accggcaacg
     3061 tttcaacttt gcccgatgca acaagttcag tggaaatatg aggggtgata tctgtcatta
     3121 attaataagc gaatatttct caattagtag tcgcgaattt ttctctttgt agataagcat
     3181 ggaacgtatt ctccagcaat gctgctatgg tcataacgcc aaccccgccc ggaactggtg
     3241 ttatggctga tgattttgga gccacctctt caaacttcac gtcgccctgg atgcgataac
     3301 ctttttttgc cgaggcatct tcaactcttg ttattcctac atccacaacc actgcgccgg
     3361 gtttaaccat gttcgcttca acaaatcccg ggcggcccag cgcacaaatt aatatatcag
     3421 cctgcaaact tatttcgttc aaattggccg tatgagaatg gcaaaccgtt actgtgcaat
     3481 ttccataatc cctgttagcg cttaataaaa tgctgatcgg ccggccgaca atattgcttc
     3541 gccctattac gaccgcatgt ttgccctttg tcccaatgcc gtaatgttta agcaaaagca
     3601 ggatcccata tggtgtcgca gaaataaagg tagggtatcc ctgcacgagc ttgcctatat
     3661 taaaaggatg aaacccgtcg acgtctttgg ccggatctat agcattgatc actttttctt
     3721 cgctgatctg ttttggtagc ggcagttgta ccaaaatccc
//
LOCUS       DASQJI010000172         2712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2012314,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000172 DASQJI010000000
VERSION     DASQJI010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2012314"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..1921
                     /locus_tag="VEV83_05205"
     CDS             83..1921
                     /locus_tag="VEV83_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK44540.1"
                     /translation="MARGRRSSHYKVPEPTLKEKFDALGNLPRFFKLVWQTNHWYTIV
                     NASLRLIRSAIPVSILYIGKLIIDEVLALSKGTITDHTFLWELVAAEFALAILSDGLS
                     RATTLVDSLLGDLFSNYTSVKIMEHAATLDLEQFEDSEFYDKLERARQQTVGRTVLLS
                     QVLAQIQDVITMIFLLAGLIAFNVWLILLLLIAIIPSFLGESYFNDRTYALTRRQTPE
                     RRELDYIRYVGASDETAKEVKLFNLSGFVIDRFKLLSEKFYNSNKKIAVKRASWGTLF
                     SFIGSLGYYTAYVVMILKTIEGGISIGTLTFLAGSFRQLRTLLESILSRFTSVSQGAI
                     YLRDYFDFFEIQPKIKTGAGSLSFPNPVKYGFTFENVGFRYQNSEVWANRNLNFTLHA
                     GEKLALVGENGAGKTTLVKLLARLYDPTEGRILLDGIDLREYDLLELRRNIGVIFQDY
                     LHYQMSVAQNIAVGNIDEQHNRDLIEAAAEKSLASTVVQKLPNKYEQALGKRFNDGVE
                     LSGGEWQKVALARAYMREAQLLILDEPTSALDARAEYQVFQRFSELTQGKIAVLISHR
                     FSTVRMADRILVLDQGNMLEIGTHEQLLASGGRYAELFELQAMGYR"
     gene            complement(1935..2339)
                     /locus_tag="VEV83_05210"
     CDS             complement(1935..2339)
                     /locus_tag="VEV83_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44541.1"
                     /translation="MKAKYLAPILFLTIAACKKESGGLVSDVQGTWELRSSDGGWSGH
                     QEYAPGNGNTYSFSGTTYAHQIKTTDTTYEYSGTFQIYTGKPCDFAPEQTLIEFDHNL
                     SPASFSLSGGELMIGTTECIADGWSGTYRKIE"
BASE COUNT          721 a          589 c          646 g          756 t
ORIGIN      
        1 accgcatcta ttctttcgcc gtacggttgt gcacaaaaca gcgtatgttc gataattttg
       61 caaaaatcgc aggagcaaat gcatggcaag aggaagaaga tcatcgcact acaaggtccc
      121 tgaaccaact ctgaaggaaa aatttgatgc acttggaaat ttgccaagat tcttcaaact
      181 ggtctggcaa actaatcatt ggtacacgat agtgaacgca tcgctgagat tgatccgctc
      241 tgcaattccg gtatccattt tatacatcgg aaaattgatc attgacgaag tgcttgcatt
      301 aagcaaaggc accattacag accatacctt cttatgggag ctcgttgccg ctgaatttgc
      361 attggcaatt ttgtcggatg gattgagccg tgcgacaaca ctcgtggaca gtttgcttgg
      421 tgacttgttc agcaattata catcggtaaa gatcatggag cacgctgcta cccttgacct
      481 ggagcaattt gaagactcag aattttacga caagctggaa cgcgcaagac agcaaacggt
      541 tggcaggacg gttctgttat cacaagtgtt ggcgcaaata caggacgtca taacgatgat
      601 ctttttgctc gcggggttga tcgcattcaa cgtgtggctc attttgttac tgctcattgc
      661 gatcattcct tcgtttctcg gtgaatcgta tttcaacgac cgcacatatg cgctcacacg
      721 caggcaaaca cccgaacgcc gtgagctcga ttacatacgc tacgtgggcg ccagcgatga
      781 aaccgcgaaa gaagtgaagc tcttcaatct ttccggtttc gtgatcgaca ggtttaagct
      841 gctatcagaa aaattttaca acagcaataa gaagatcgcg gtgaagcgtg cgtcatgggg
      901 aacattgttt tcttttatag gcagtttggg ttactacact gcctatgttg ttatgatctt
      961 aaaaacaatt gagggaggga tcagcatcgg aacgcttact ttcctggcag gctcgtttcg
     1021 gcaactgaga acgttgcttg aatccattct ttcgcgtttt acaagtgtgt cgcaaggcgc
     1081 gatctacctg cgtgattatt ttgatttttt cgagatccaa ccaaaaataa aaactggcgc
     1141 cggttcattg tcttttccaa acccggtaaa atatgggttc acatttgaaa acgttggttt
     1201 tcggtaccag aacagcgagg tgtgggcaaa tcgaaacctg aatttcacat tacatgcagg
     1261 ggaaaaactt gcgctggtgg gggagaacgg cgcaggtaaa acaacgcttg tgaaacttct
     1321 cgcgcgttta tatgatccga ctgagggtcg aatattgctt gacggcatcg atcttcgtga
     1381 gtacgatctt ttggaattgc gcagaaatat cggcgttatc ttccaggact atctgcatta
     1441 ccagatgagt gtcgcgcaaa atattgcagt gggaaatatc gatgagcagc ataaccgcga
     1501 tttgatcgag gccgcagcag aaaaaagttt ggcgagtacc gttgtccaaa aactgccgaa
     1561 caaatatgag caagcactcg gcaaacgctt taatgacggc gttgaattaa gtggcggaga
     1621 atggcagaag gttgcgctcg caagagctta tatgagggaa gcgcagttgc tcattcttga
     1681 tgaaccaaca agcgctcttg atgcgcgtgc agaataccag gtgttccaac gcttctctga
     1741 acttacgcaa ggaaagatag ctgttcttat ctcgcaccga ttttcgacgg tgcgcatggc
     1801 agaccgtatt cttgttttag accagggaaa catgcttgag atcggcactc atgaacaatt
     1861 actcgcatcc ggtggtcgtt atgctgaatt gttcgaacta caggcaatgg gatacaggtg
     1921 atttcggcat tcgatcattc gatctttcga taggtaccgc tccatccatc cgcaatgcat
     1981 tcggttgtgc cgatcataag ctctccgccc gataaagaaa aactggctgg agaaaggttg
     2041 tgatcaaatt caatgagcgt ctgttcaggc gcaaagtcgc agggcttacc cgtgtaaatc
     2101 tgaaacgtgc ccgaatactc ataagttgta tcggtcgtct ttatttggtg tgcatatgtg
     2161 gttccgctaa agctgtacgt gtttccattg cctggcgcat actcctggtg gccgctccaa
     2221 ccgccgtcgg acgaccttaa ttcccaggtg ccctgcacat cagatactaa gccgccgctt
     2281 tcttttttgc aagctgctat tgtcaggaac aatattggag cgagatattt tgccttcatt
     2341 tattttcctt tgtttcgcac gttgacaact gtttttttag aaacgttgca cgttcaacag
     2401 ctattgcatt agccggacta gaagtggcaa aaggcaaata attgtatgcg caaacggact
     2461 acaggagtct tctggaaaaa atttaatttg ccgcaccaaa ttattttaat gcttttaatg
     2521 agataactgc tttactgcgt tatcaaatat tttgacacaa attcctctgc cgggttaagt
     2581 gcagaacatg tttagttgat atcaaatgtt taccgacaac ctgctttcga ttcttttttg
     2641 ctttgcgttg gtgctgtacg cgtttgcatc gataagaaac gttctgaagg aaaaaggtgt
     2701 ggaccctgaa ct
//
LOCUS       DASQJI010000173         5146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1551407,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000173 DASQJI010000000
VERSION     DASQJI010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5146
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1551407"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1415)
                     /locus_tag="VEV83_05215"
     CDS             complement(<1..1415)
                     /locus_tag="VEV83_05215"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HYK44542.1"
                     /translation="MKCFSLFTCILVLMSASEENIAQSQPGTDFKTITNNNGPTLGYS
                     PSSGVKILDVDGLRFKDLDKNGKLDTYEDWRLPVDVRAKDLASKMSIEQIAGLMLYSA
                     HQAIPANTKGLGAGTYNGKPIDSTDMQPYDLSDQQKKFLKEDNLRHILVTRVKSPEVA
                     ARWNNNVQAFVESLGLGIPANNSSDPRNGVVANAEYNLGAGGTISMWPESIGMAATFD
                     PSIVQTFGRIAAQEYRALGISTALSPQIDLATEPRWSRFSGTFGENPKLATDMARAYV
                     DGFQTSTGSAEIKDGWGYHSVNAMVKHWPGGGPGEGGRDAHYAYGKFAVYPGNNFQTQ
                     LIPFVDGAFKLDGKTKYAAAVMPYYTISFNQDTTNGENVGNSYSRYIINDLLRTQYKY
                     DGVVCTDWLITADEGKTPDVFAGKSWGVEKLSVAERHYKILMAGVDQFGGNNVAGPVL
                     EAYQMGVKEHGEAWMRQRFEQS"
     gene            complement(1637..2470)
                     /locus_tag="VEV83_05220"
     CDS             complement(1637..2470)
                     /locus_tag="VEV83_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK44543.1"
                     /translation="MKNTITLLACLGLFSVASAQHVNPAKDWKLGIALWTFHTVTFAQ
                     ALNMVDSAGVKYIEPNNFTKTLPELKDSTLAQLSPEGILKLKSLIEQRGLKCKSFYVA
                     GGKDIIAWKKQFETAKQLGAEFITTEPPLNMWDSIDSLAGIYKIKVAIHEHWRGMSHY
                     WDPDTTLMALKGHPNFGVCADIGHWPKSGINPLNAIKKLSGHIIALHLKDIAAYNDPK
                     LTDVPIGTGVVDFPAIFQELKKQGFKGYIYIERDTIEPGGNLPSVMQEVKYYNEQVKK
                     L"
     gene            2862..3815
                     /locus_tag="VEV83_05225"
     CDS             2862..3815
                     /locus_tag="VEV83_05225"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HYK44544.1"
                     /translation="MRFKDLNERQVLAVAITAEEEDAHIYRDFAESLRRDFPASAELF
                     LKMAEEEDIHRHRLIDLYRSKFGEHIPLIRRQDVKGFLQRRSSWISQTLRPEYAREEA
                     ALMEIEARRFYEAAALKAQDAGIRQLLGDLAQEEISHENKFEQINTAQIASGEVNIEH
                     ETARRLFVLRFIQPGLAGLMDGSVSTLAPLFAAAFATSSPLDAFKVGLAASIGAGISM
                     GFAEALSDDGKISGRGSPLLRGIVCGVMTTMGGLGHTIPFLISNFHTAVTVAMIVVII
                     ELAVIAWIRKRYMDTPLLSAIFQVVVGGMLVFFVGWLVGSG"
     gene            complement(3863..>5146)
                     /locus_tag="VEV83_05230"
     CDS             complement(3863..>5146)
                     /locus_tag="VEV83_05230"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HYK44545.1"
                     /translation="HFCEPISIMATNKKAAITFIFFTLLIDVMGFGLIIPVMADLIAQ
                     LKHIPMNIASNYGAILLSVFAITQFLFSPVIGNLSDRFGRRPVLLCSLLGFGVDYIVL
                     AVAPAYGWLFIGRIVAGITGASFTTATAYIADVSTNETDRAKNFGLIGAAFGIGFVLG
                     PALGGFLAHWGIRAPFYAAAALCLLNCLYGYFFLPESLDAQHRRPFEWRRANPFGSLR
                     FLTRHPEIGGLAIGFFLIYLGAQSIQGNWNFFTMYRFGWSEKMIGISLALVGVLVGGV
                     QAGLTRVINPKIGNENSIYLGLSLYTFGLLLFAFANQSWMMFAFLVPYCMGGICGPSL
                     QSVISGHVPVNQQGELQGALTSLMSLTTIIGPPLMSLSFSYFTTDKAPFYFPGMQFLI
                     GAACMLLSVIIIYKVLNKEKKEHPELRTVIDNENV"
BASE COUNT         1342 a         1229 c         1194 g         1381 t
ORIGIN      
        1 gattgttcaa aacgttgacg catccacgcc tcgccatgtt ctttcactcc catttgatac
       61 gcttcgagga cgggacctgc gacgttattc ccgccaaatt gatcaacacc cgccatcaat
      121 attttgtaat gccgttcagc aaccgaaagt ttttcaacac cccacgactt tcctgcgaat
      181 acatccggtg tcttgccttc atccgcagtt atcagccaat cggtgcacac cactccatcg
      241 tatttgtatt gtgttctcag cagatcgttg atgatgtatc tgctgtagct gttgccaacg
      301 ttctcgccat tcgttgtatc ctggttaaaa gagatcgtat agtacggcat caccgcagcc
      361 gcatatttcg ttttgccgtc aagcttaaat gcgccatcaa caaacgggat aagttgcgtt
      421 tgaaaattgt tgcccgggta cacagcaaat tttccataag cataatgcgc gtcacgtcca
      481 ccttcgcccg ggccgccgcc aggccagtgt ttcaccatcg cattcacgct gtgataaccc
      541 catccatctt ttatttcagc agaccctgtt gaagtttgaa aaccgtcaac ataagcacgt
      601 gccatgtccg tggcgagttt tggattttcg ccgaatgttc cgctaaaccg gctccatcgc
      661 ggttctgttg caagatcaat ttgcggcgat aaagccgtac taatgcccag tgccctgtat
      721 tcctgcgcag ctattcttcc aaatgtttgc actattgaag gatcgaacgt tgcagccatc
      781 ccaattgatt caggccacat agaaatagtt cccccggcgc caaggttgta ctcagcattt
      841 gcaacaactc cgttgcgcgg atcggagctg ttattggcag gaataccaag acccaaactc
      901 tcgacgaatg cctgcacatt gttgttccat cgcgccgcaa cttccggact tttcacgcgg
      961 gtaaccagga tgtgcctaag gttgtcttct ttcaaaaatt ttttttgctg atcgctcagg
     1021 tcgtacggct gcatgtcggt cgaatcgatt ggcttgccgt tgtaggtgcc tgctccaaga
     1081 ccttttgtgt tcgcaggtat cgcctggtgt gcgctataca acatcaggcc agcgatctgc
     1141 tcgatgctca ttttgctggc aaggtccttc gctctcacgt caaccggcaa ccgccagtct
     1201 tcgtaagtgt caagcttacc gtttttatcc aggtctttga aacgaagccc gtcgacgtca
     1261 agaattttta cgccggaaga aggcgagtaa ccaagcgttg gcccattatt attggttatc
     1321 gttttgaaat cggtgccagg ctgactttgt gcaatgtttt cttccgaggc actcattaaa
     1381 acaaggatgc aagtgaagag gctaaagcat ttcattggcg aagtttattg cgatgaagaa
     1441 tggcaaccta aaattttcgt caaggtaaat taaatcgcga cttgtgcatt aagcttgcgt
     1501 gagtatgcga caagcgccaa aaatgccgcg acaaaataga aagagttttg caaccggcct
     1561 ctgctttgca aattgcctgc ttcagtcaga ctggcaaaac atacgtgatg ccggtttggg
     1621 tatgctcagc gcttcatcac aactttttca cctgttcatt ataatacttc acttcctgca
     1681 taacagatgg caagttgccg ccgggttcta tggtgtcacg ctcgatataa atatatcctt
     1741 tgaatccctg ttttttcagc tcctggaaaa tagcaggaaa atccacaacg cctgttccaa
     1801 tgggaacatc tgtcaacttg ggatcgttat aagctgctat atcttttaaa tgaagagcaa
     1861 tgatatggcc gctcaatttt tttattgcgt tcaaaggatt gatcccgctt ttcggccaat
     1921 gcccaatatc agcacacacg ccaaaatttg gatgaccttt caaagccatt aatgttgtat
     1981 ccgggtccca atagtggctc attcccctcc agtgttcatg tatggccact ttaattttat
     2041 aaatgcctgc aaggctatcg atgctgtccc acatatttaa aggcggttct gttgttatga
     2101 attcagcgcc gagttgtttc gctgtttcaa actgcttttt ccacgcaatg atatctttcc
     2161 cgcccgccac gtaaaacgat ttgcatttca atcctctttg ttctatcaat gactttaatt
     2221 tgagaatgcc ttcgggggat aattgtgcaa gtgtggagtc tttcagctca ggcagcgttt
     2281 tggtaaaatt atttggctcg atatatttca caccagcgct gtcaaccata ttcagcgcct
     2341 gcgcaaaagt tacggtatga aatgtccaca atgcgatccc cagcttccag tctttcgcag
     2401 gatttacatg ttgggccgaa gcaacggaaa acaatccgag gcaggcaagc aacgttattg
     2461 tgtttttcat ttttatttat ttttttgaaa gatattattt atgaatggcg aaaggccacg
     2521 gccaatttcc aatttgccgt ttaaatcgga tgtcgaaaat aaacacaatt agcctttttt
     2581 tgccttggcg ccgggtcatt ttcatcattg cggcgggtgg tggaattagt ggaacacaaa
     2641 gcgcacaacg aaccacaaag ttcacaaggg aaaaagccgg ccttacgttg tgttcgtcgt
     2701 gccagcttcg tggtcgtcgt gctccacagt ttttctcgaa gacgggacac cagtttaaga
     2761 aatccttttt cgcccactgc ataaaacgct ccaaccatct aaaaaaattt aatttagatt
     2821 ttctaaacag gtggtcttca tgtaaccaaa caaactgacg tatgcgtttt aaggatctca
     2881 atgaacggca ggtgctcgct gttgcaataa ctgctgaaga ggaagatgca catatctacc
     2941 gcgattttgc agaatcgttg cgccgcgatt ttccggcttc agcagaactg tttctaaaaa
     3001 tggcggagga ggaagacatt cacaggcatc gcctgatcga tctatatcgc agcaaattcg
     3061 gcgaacatat tccattgatc aggagacagg acgtaaaagg ttttttgcaa agacgcagtt
     3121 cgtggatcag ccaaacttta aggcctgaat atgcacgcga agaagctgct ttgatggaaa
     3181 ttgaagcgcg gcgtttttat gaagcggcgg ccctcaaagc gcaggatgcg ggcattcgtc
     3241 aattgttagg agatcttgcg caggaagaga tctcgcatga aaacaagttt gagcaaataa
     3301 acacggcgca gatcgcttca ggtgaagtaa acattgaaca cgaaactgca cggcggttat
     3361 ttgtgttgcg ttttattcaa ccggggcttg ccggtttaat ggatggttcg gtttctacat
     3421 tagctccgtt gtttgcagcg gcttttgcca catcaagtcc gctggatgct ttcaaggtcg
     3481 gattagcggc gtcgatcgga gccggcatta gtatgggttt cgccgaagca ctttcagatg
     3541 atggaaagat aagcgggcgc ggttcgccat tgctgcgcgg tatcgtttgc ggtgtaatga
     3601 caacgatggg tggattgggg cacacgatcc cgttcctgat cagtaatttt catactgcag
     3661 taactgttgc catgatcgtg gtgatcattg aattggccgt catcgcgtgg atcaggaaac
     3721 gctatatgga cacgccattg ctttctgcca tattccaggt tgtcgtgggt ggcatgctgg
     3781 tcttttttgt tggatggctg gtgggatcag gataatgagg aatgagtgat gagtgatgag
     3841 taatcagtct gaacctcaaa cctcaaacat tttcattatc gataaccgtc cgcaactccg
     3901 ggtgttcttt cttttccttg ttcaatactt tgtagatgat gatcacgcta agcaacatgc
     3961 acgcggcgcc gatgaggaac tgcatgcctg gaaaataaaa cggtgcttta tcggttgtga
     4021 aataactgaa actaagactc attaacggtg ggccgatgat agtagtgagg ctcattaaac
     4081 tcgtaagagc tccctgcagt tcgccctgtt ggttaacggg gacgtggccg gatatcactg
     4141 attgcagaga cggtccgcaa ataccgccca tgcagtaagg cacgaggaat gcaaacatca
     4201 tccagctttg attggcaaac gcaaaaagaa gcagcccgaa tgtatacagg ctcagaccaa
     4261 gataaatgct gttctcgttc cctatttttg gattgatcac acgcgtaagg cccgcttgca
     4321 cgccgccgac caacacgccc acgagtgcga gcgaaatgcc tatcatcttc tcactccatc
     4381 caaaacggta catcgtgaaa aaattccagt tgccctggat cgattgcgcg cccaaataaa
     4441 tcaggaagaa tccgatcgcg agtccgccga tctcagggtg gcgggttaag aatctcaatg
     4501 acccaaaagg atttgctctc ctccattcga aaggtctgcg gtgctgcgca tccaaagatt
     4561 cgggtaaaaa gaaataaccg taaagacagt tcaacaaaca aagtgcagca gccgcataga
     4621 acggcgcacg aatgccccag tgtgcaagaa aaccaccaag tgctggaccg agcacgaagc
     4681 cgataccaaa cgccgctcct atcaatccaa aattttttgc gcgatccgtt tcgtttgtac
     4741 tcacgtcggc gatgtatgca gttgcagttg taaaactggc tcctgtgatg cccgcgacga
     4801 tgcgaccaat gaacaaccat ccataagcag gtgcaaccgc gagcacgata taatcaactc
     4861 caaagccgag taaagagcat aataaaacag gacgccggcc aaacctgtcg ctcaggttgc
     4921 cgataaccgg agaaaaaaga aactgtgtga tcgcaaacac cgaaagcaaa atcgcgccat
     4981 agttgctggc gatattcatc ggaatgtgct ttaactgcgc aatgagatcg gccattaccg
     5041 gaatgatcaa accaaatccc atgacatcga tgaggagcgt gaagaagata aaagttatag
     5101 ctgctttctt attggttgcc atgatagaaa ttggttcgca aaaatg
//
LOCUS       DASQJI010000174         9196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_323187,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000174 DASQJI010000000
VERSION     DASQJI010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9196
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323187"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VEV83_05235"
     CDS             <1..307
                     /locus_tag="VEV83_05235"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK44546.1"
                     /translation="ALKAPHGETHGAEDILDICEQNHVPLIPFFSILTAHKKKDNRVA
                     EVASKYNATEAQINIAWLLHRSPWILPIPGTSSLKHFQENIKAVNIELTQEDMDYLD"
     gene            919..1926
                     /locus_tag="VEV83_05240"
     CDS             919..1926
                     /locus_tag="VEV83_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44547.1"
                     /translation="MKANQLSALLMLAFSACSKMDNQPIRSGVMNNSAAEFTDTVKVA
                     LTDLGTGTYFGITGGLYPGGLNYPTLQYKKDLKSFASAIRPLNNIGAVDSTVGKIVLI
                     SLGGSTAGHMMRALKIKTKNDTSTNPFLKLIDCSDGHATGSFQSIANPNDPYWTLVFD
                     AISTNTATPEEVQVIYIESEDSSQVISFPDRPYEAKNDIEAAMRACKMKFKNLKLVYF
                     LGRTTTFSETHDLKQTTNREPCPYYNGWATKFAIEDQINGVPGTEYKGANAVAPLLTW
                     GWYQWADGTNIPRQDGFTWQDSDTVDGLHATDVGENILSDRFKNFLLTDKFASIWYKR
                     N"
     gene            2285..2884
                     /locus_tag="VEV83_05245"
     CDS             2285..2884
                     /locus_tag="VEV83_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44548.1"
                     /translation="MKCSAYLVLSLLAVQIFFSGCQKSVDDSMITTGPEISDVKGKIL
                     YQFSFENNNYDTSLQGWKSPNYSFSKDVPPGGGVWSLQLTPGWIPQQGYAEHSVKLDS
                     GNYQLKFKSETRVVNNSTNALGGGYIRLIKRSISATNTTKDNILAEKQFTNTTWKIHA
                     VLSPVHIGAGDLIVIQVSAGATELVTWSTLFDNVMLLSQ"
     gene            complement(2916..3440)
                     /locus_tag="VEV83_05250"
     CDS             complement(2916..3440)
                     /locus_tag="VEV83_05250"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HYK44549.1"
                     /translation="MVITDLTIIAQESVTKEEENFVLGEILKNKNSDEIDELVFQLNE
                     SISSQIDCTQCGNCCRSLMINIDSDDTQRLAAHLHTSTKKFEKKYIEHSGEGTLAVMN
                     AIPCNFLHENKCSVYAARPKECREFPALHHKGFTGRLFAIFMHYGRCPIVYNVIESLK
                     TKIATSDETSFADY"
     gene            complement(3532..5208)
                     /locus_tag="VEV83_05255"
     CDS             complement(3532..5208)
                     /locus_tag="VEV83_05255"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK44550.1"
                     /translation="MTNFCRFVLLCCSLLNVSRAEAQRPYNVIFIIVDDMSIAIDAFG
                     NPQAPSPNFQRLMQHGVLFKTTYVSYPLCEPSRTALFSGIRPDTNGVVNNGTTNIRWK
                     LGSDFRFFPEYFHDHGYRTEAFGKVGPCGEEDQISWDHIFKADHEEGHFDHVPTWWID
                     TSAKTFTGTMGGINVDSLSVKIDHPAATPYLYALGLSTHNAFTPIMDSWNMTGDSTGT
                     ELVPLDRYGTKTNVKGYQSALIKLPGGPPDDISDIPAPAFNKDFYPQYTDQQVRDIRH
                     AYFAELLEADMNLKTVIDELDKTNAWENTVVVFCSDHGLMMGEHGGLFLKNTLFEEAL
                     RIPFVVCAPGKLRGAVCEQPVEMIDLYPTLVELCGLPLKRGMQGVSLVPLLENPDIPL
                     HDAVFSQRALDLDKAKYGDPQARAVRTVKYHYNNWGDFGEELYDIQNDPHEYTNLASD
                     PAYAAVLQDMRKLLAEFMGAHEPVTQPLFVFPNPATGTVTISYHSITRANVHLKIYDA
                     VGKLVFTKQEVASPGENRYQVFLGDLKTGAFILQLDNGDSPQQAKIIIQR"
     gene            5472..5948
                     /locus_tag="VEV83_05260"
     CDS             5472..5948
                     /locus_tag="VEV83_05260"
                     /inference="COORDINATES: protein motif:HMM:NF017936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK44551.1"
                     /translation="MSAQNIIDKLKLTRHPEGGFYRETYRSDHVIVNDRNEDRNLSTA
                     IYYLLKDEDRSLFHRIRSDELWFFHAGEPLEIVLIEREQLTTITLGNNIEQQFPQVRI
                     PANTWFAARVKNAKGFSLVSCVVSPGFDFADFELAKRADLIGQFPHLKNAIEELTQ"
     gene            6179..8794
                     /gene="ppsA"
                     /locus_tag="VEV83_05265"
     CDS             6179..8794
                     /gene="ppsA"
                     /locus_tag="VEV83_05265"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HYK44552.1"
                     /translation="MNSYVLTFQEIDKTKLSLVGGKAANLAELCMIEGIKVPDGFCIS
                     TKAFKRIIAQTPMINSLLDELSVLIADKREKITRLSSEIRRTIEDTSIPSDIADEISG
                     HLTSHGEKNAYAIRSSATAEDLPTVSFAGQQDTYLNVIGGKAILHHIRKCWASLFTDR
                     AVIYRIQNEFDHRKVQMAVIVQKMIFSNVAGIMFTADPITSNRKILSIDASFGLGEAL
                     VSGIVNADNYKVRSGEIIDKKISNKKLAIYALKDGGTNELPLAPQDHDNQALADEEIL
                     RLENIGRKIEEYFSSPQDIEWCLHDNNFYIVQSRPITTLFPIPETNDQENHVYVSVGH
                     QQMMTDAMKPLGISVWQLTAARPMYTAGGRLFVDVADILSSPATRANMLDVLGKSDPL
                     IKDALTTIIERGDIIKSFSDDAKEEASGKSNQDPPPDFKTLKEYDPAIVSVLIRNSER
                     SIEALKQNIETKSGTALIDFILEDRQELRKGLSDPESFGVIMTAMNASAWINEKMNEW
                     LGEKNVADVLSQSVPNNVTSEMGLELLEVADVIRPYPQVVEYLQHVKDDNFLNELGMF
                     NGGKEAHHAINNFLDRYGMRCAGEIDITRTRWSEKPVTIIPLILNNIKNLSRGESKRK
                     FEQGKQQASQKEQDLLRRLSQLPDGDEKVKQTKRMIDLVRNLSGYREYPKYSIVSRYF
                     VYKQALLKEAERLARASVIRDKKDIYYLTFEELGDVIRRNTIDQELVSKRKDEYRRFE
                     KLTAPRVITSDGEIVNGQYKREHLPANAIVGLAVSSGVVEGRARVIPSIEHAELEEGD
                     ILVTSFTDPSWTPLFLSIKGLVTEVGGLMTHGAVIAREYGLPALVGVENATKRIHDGQ
                     TIRVNGTEGYVEILT"
     gene            8945..>9196
                     /locus_tag="VEV83_05270"
     CDS             8945..>9196
                     /locus_tag="VEV83_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HYK44553.1"
                     /translation="MASDTFKITIHMVSSLDGMIAKKDNSVSWFDTSDHYENGIAQEN
                     TEEFLKTIDCYVMGSRTYEHAVELSASYGWAYGDTPTVVL"
BASE COUNT         2745 a         1972 c         2045 g         2434 t
ORIGIN      
        1 tgcgcttaaa gctccgcatg gtgaaacaca tggcgcggaa gatatcttgg atatctgcga
       61 gcaaaaccat gttccgctca tacccttctt ttccatcctt actgcgcata aaaagaaaga
      121 caatcgcgtt gcagaagttg cgtcgaagta caatgccaca gaagcacaaa taaacattgc
      181 atggttgctt catcggtcgc catggatatt acctataccg ggcacatctt cgttaaagca
      241 ttttcaagaa aatattaaag ctgtaaatat tgagctgaca caagaagata tggattattt
      301 ggactgacgg gtggcagttg agagttgacg gctgacagtt gacaggtgcg caacactcaa
      361 tacccaatat ccaataaatc aatactcaag tgcagctctg tagcgcgact caacgagttg
      421 agagttgacg gttgacagtt cacagttgat aacattcaat agtcaatatt caatagatca
      481 atattcaact tgagatctgc ctgcggtctc tgtaagaacc ttagatgggg ccgaccgaag
      541 cctatacttt gtttaccacc tcgcgctctg aatgaaacaa gatatattat cagccttagc
      601 acaaggatga gttttactaa ggcagatcaa catcggatcc attcatgcgg cgctgtccac
      661 cttctgaaac gcggcgaaac atcaacgtta atcagctacg catgccgggc agttttactt
      721 cactcatttg tttttacagt taaagtataa aaaatgtaaa cccgttaaat aacggagaaa
      781 taaatcgtcc ttacatccgt cagatgtagc gaaacgtaca ttgatttcac cttttttgaa
      841 gtggattttt gtgtcatgat gtgaaaaaat gataaactct tgaggcgttt ttttgaatca
      901 tgatcaaaat ctctttgtat gaaagcgaat caactttccg cactgctgat gctggcattt
      961 tccgcctgta gcaaaatgga taaccagccc ataagatcgg gagtgatgaa taatagtgct
     1021 gctgaattta cagatacagt aaaagttgca cttaccgacc ttggaaccgg aacttatttt
     1081 gggattaccg gcgggttgta tcccggagga cttaactatc caacgctgca atacaagaag
     1141 gatttgaaaa gttttgcttc ggctatcagg ccgctgaata atattggcgc agtagattca
     1201 acggttggta aaattgtttt aatttcatta ggaggcagca cggccggaca catgatgcgt
     1261 gctttaaaaa taaaaaccaa gaatgacact tctactaatc cttttttgaa attaatcgat
     1321 tgctccgacg gccatgccac cggatcattt caaagcatcg ctaatccaaa cgacccttat
     1381 tggactttag tcttcgacgc aatttcaaca aatacagcaa cgcctgaaga ggtgcaggtc
     1441 atctatatag agtcggaaga ttcttcacaa gtaataagct ttcctgatcg tccgtacgag
     1501 gctaaaaatg atattgaagc ggcaatgcgg gcttgtaaga tgaaatttaa gaatctgaaa
     1561 ttagtctatt tccttggcag gaccacaaca ttctcggaga cccatgatct taagcagact
     1621 acgaatagag aaccttgtcc atattataat ggttgggcga cgaaattcgc cattgaggac
     1681 cagatcaacg gtgtgccggg cacagaatat aaaggagcca atgctgtcgc tcctctgctt
     1741 acctggggtt ggtaccaatg ggcggatgga acaaatattc cgcgacagga tggttttacc
     1801 tggcaggaca gtgatactgt agacgggctt catgccacgg atgtggggga aaatatactc
     1861 agcgaccgtt tcaagaattt tttgcttaca gataagtttg caagcatctg gtataaaaga
     1921 aattaaaaga ccagtcggga ttagtagatg actgcggaga gtgagaaccc ggcaacgatc
     1981 aatactcaat atttaaacgt gttgtgccat taagatcgac cacgaaaaat tctgttaagc
     2041 tagtttgctt ccggaagata tggcaccacg ccgccgtcat gctcggcccc gaccgggcat
     2101 ctgctgtaag taatttagag gccaataaat aaatctttcc acccgggatt gaaatgcgaa
     2161 aacaactatc cttccatgat cgattctact ccgcatcatg agttcgcatt ttgttgtgtt
     2221 aggaaagtgc ccaattgcat gcaacgtttt gcataatttc aaagccaaac aaaaaaatac
     2281 tgtcatgaaa tgttccgcct atctggtgct ttccctgctt gctgtccaaa tatttttttc
     2341 cggatgtcaa aaatcagtgg atgattcgat gatcaccacc ggtccggaga tcagcgatgt
     2401 gaaaggcaag atcctgtacc agttcagctt tgagaataat aattatgata caagccttca
     2461 aggttggaaa agtcccaact acagcttttc taaagatgtg ccgcccggcg gtggagtatg
     2521 gtcgcttcaa ttaacgcccg gctggatccc gcagcagggt tatgcggaac attctgttaa
     2581 gcttgactcg ggcaactacc agttgaagtt caagagtgaa accagggtgg tgaataactc
     2641 aactaatgcg cttggtggcg gctatatccg actgatcaag cgatctatat ccgcaaccaa
     2701 tacgacgaag gacaacatac ttgcggaaaa acaatttacg aatactacct ggaagatcca
     2761 tgcagtatta tcaccagtgc atattggggc cggagatctg attgtcatcc aggtttcggc
     2821 gggcgccacc gagctcgtaa cgtggtcgac tttatttgac aacgtgatgc tgctaagcca
     2881 atagtccgcg agcatgccgt gaaacgtgag cgagatcaat aatctgcaaa tgaggtttca
     2941 tcactggtcg caatcttcgt tttcagggat tcaataacat tatagacgat cgggcaacga
     3001 ccataatgca taaagattgc gaatagcctc ccggtaaaac ctttgtgatg taatgccgga
     3061 aattctctgc actctttcgg tcgcgccgca taaacactgc atttattttc atgaagaaaa
     3121 ttacacggaa tcgcgttcat tacggccagc gttccttcac ccgaatgttc aatatatttt
     3181 ttttcgaatt tttttgttga ggtatgcaag tgtgcggcca atctttgcgt gtcgtcgctg
     3241 tctatattta tcatcagact cctgcaacag tttccgcatt gcgtgcaatc aatttgagac
     3301 gaaatcgatt cattcaattg aaaaaccaat tcatcaattt catcgctgtt cttatttttt
     3361 aagatctcgc ccaaaacaaa attttcttct tctttcgtaa ccgattcttg tgctattatg
     3421 gtgagatctg ttattaccat gaatgcaagg tagatgttaa gtatcaagct tgtctctgcc
     3481 gagagcattt gggtagccct tgaataattc caccaaggac gctgtatcgc gttatctctg
     3541 tatgatgatt ttcgcctgct gtggtgaatc gccgttatct agttgaagaa taaatgcacc
     3601 ggtctttaag tcgcctaaaa atacctggta tctgttttcc cccggcgatg caacttcctg
     3661 cttcgtaaac accagtttcc cgactgcatc ataaattttt aaatgcacgt tagcccgtgt
     3721 tatgctgtga taactaatgg taaccgtacc ggtagcagga ttcgggaaga caaacagtgg
     3781 ctgcgtcacc ggttcatgcg ctcccataaa ctctgcaaga agtttacgca tgtcttgtaa
     3841 tacggctgca tatgcgggat cacttgcaag gtttgtatat tcatgaggat cgttttggat
     3901 gtcatacaac tcttccccaa aatcccccca gttgttataa tgatatttga ctgttctcac
     3961 tgcccttgcc tgcggatctc catacttagc cttgtcaaga tcgagcgcac gttgagaaaa
     4021 gacagcgtcg tgcaacggaa tatccgggtt ttccagaagc ggaacaaggc ttacgccctg
     4081 catgcctcgc ttcagcggta atccacaaag ctcaacaagg gtaggataca aatcgatcat
     4141 ctccaccggt tgctcgcaaa ccgccccccg caatttgccc ggcgcgcata cgacaaaagg
     4201 tattcttagc gcttcttcaa acaatgtatt tttcaaaaac agccccccat gctcgcccat
     4261 cattaaaccg tgatcggaac aaaagacgac cacagtattt tcccacgcat ttgttttgtc
     4321 cagttcatcg atcaccgttt ttagattcat atccgcttca agcaattcgg caaaatatgc
     4381 atgtcggata tcgcgcacct gctggtcagt gtactgcgga taaaaatctt tgttgaacgc
     4441 cggagccggt atgtctgaaa tatcatcagg cggaccaccg ggtagcttaa taagtgcgga
     4501 ttgatagcct ttcacatttg tctttgtacc atacctgtca agcggcacta gttcggtacc
     4561 tgttgaatcg ccggtcatat tccaggagtc cataatagga gtgaaggcgt tgtgcgtgga
     4621 aagcccaagc gcatataaat acggagttgc cgcaggatga tcgattttta cacttaatga
     4681 atcaacattt atgccgccca tcgtgcctgt aaacgtcttc gcgcttgtat caatccacca
     4741 tgtaggaacg tgatcgaaat ggccttcctc atggtcggct ttaaaaatgt gatcccagga
     4801 tatttggtct tcttctccgc agggaccaac ttttccaaag gcctcggtcc ggtacccatg
     4861 atcatgaaaa tattcaggga agaacctgaa atcagaacca agcttccacc ggatgttagt
     4921 tgttccattg ttaacgacac cgtttgtgtc gggccgtatt ccactaaaca acgctgtgcg
     4981 actcggttcg caaagaggat atgaaacgta tgttgtttta aacagaacac catgctgcat
     5041 taaacgttgg aaatttggcg aaggcgcctg tgggtttcca aatgcatcaa ttgcgatgct
     5101 catatcatct acgataataa aaattacatt ataaggtctt tgagcctctg cccgcgagac
     5161 atttaacaga ctgcaacaaa gcagaacgaa gcgacaaaag tttgtcatca ataggaggta
     5221 tgcttataaa tatattaaaa acctatttac ataacaagta aaatacgatg atcctgatat
     5281 aagttgatga cggtattgca aattttattt tctgctttca aagatgaggc gtgtttgcgt
     5341 gcatcttaaa aaattgaatg ctgcaacaca attaaaccaa actgcgtagc tctttctttg
     5401 taaatcccag gcaagttttc cttccattac gttctaatct atccgtaact tcatgtcagt
     5461 ccccggtaaa tatgagtgcg cagaatataa tcgataaact gaaactaaca cgccatcccg
     5521 aaggcgggtt ctaccgagaa acatacagat ctgatcatgt cattgttaat gacagaaacg
     5581 aagatagaaa tttaagcact gcgatatatt atttgctgaa ggatgaagac agatctcttt
     5641 tccatcgtat ccggtcagat gaattatggt tttttcatgc aggcgaaccg ctggaaatag
     5701 tattaattga gcgagagcag ttaacaacga tcacgctcgg caataatatt gaacagcaat
     5761 ttccgcaggt gagaattccg gcaaacacgt ggtttgctgc gcgggttaag aatgcaaaag
     5821 gattttcgct tgtgagttgc gttgtctctc caggctttga ttttgcagat ttcgagttgg
     5881 caaaaagagc agacctgatc gggcagtttc cgcatttaaa aaacgctatt gaagaattga
     5941 cccaataaga aatatcgcca ccacaacaaa ctcttcagcc gatggcgctt ccaaaaaaca
     6001 tatttaatcg ataagtccaa acatcaacta tttaattgga taacgcgatt gcaataacta
     6061 ttgttgcatt taaaaaatat agtatcaaaa gcattttcgg cttaatgatg acaaatattt
     6121 ttggagaaaa tttttttgca cgaccgaatt tgatcatcac agaaaaactg ttgaacgcat
     6181 gaattcatat gtgctgactt ttcaggagat cgacaaaaca aaactcagcc ttgttggcgg
     6241 taaagccgca aacctggcgg aactttgcat gatcgaagga attaaggtac cggatgggtt
     6301 ttgtatttcc actaaagctt ttaaacggat catcgcacaa acgccgatga tcaactcgtt
     6361 actcgatgag ctatcagttc tcatagcgga caaacgtgaa aagatcaccc ggcttagtag
     6421 cgaaattcgg cgcaccatcg aagacacgag cattccgtct gacattgccg acgagatcag
     6481 tggccatctc accagccatg gcgaaaagaa tgcatatgca atacgatcga gtgcaacagc
     6541 ggaagatctg ccaacagtat ctttcgcagg acagcaggat acttatttga acgttattgg
     6601 cgggaaagca atcctacatc acatccgcaa atgctgggca tcactgttta cggaccgtgc
     6661 cgtgatctac cgaattcaaa acgagttcga ccatcgtaaa gtgcaaatgg ctgtgatcgt
     6721 tcaaaagatg atcttttcta atgtggccgg cattatgttc actgccgatc caatcacttc
     6781 caacaggaaa atattatcga tcgatgcgag cttcggcctt ggcgaggcgc ttgtttccgg
     6841 aattgtaaat gctgacaatt ataaagtacg aagcggcgag atcatcgata agaaaatttc
     6901 caacaagaag ctggctattt atgcgctaaa agatggcggt accaatgaac tgccgctcgc
     6961 gccgcaagac cacgacaatc aagcattggc ggatgaagaa attttacggc ttgaaaacat
     7021 cggcagaaag atcgaagaat atttcagttc gccacaggac atcgaatggt gtttgcacga
     7081 taacaacttt tatatcgttc aaagccgtcc gatcacgact ttgtttccta ttcccgaaac
     7141 aaatgatcag gaaaatcacg tttacgtttc tgttggacat cagcaaatga tgacggatgc
     7201 gatgaagcca ctgggcatat ccgtatggca gctaactgct gcgcgcccaa tgtatactgc
     7261 cggcggacga ttgtttgttg atgttgcgga catcctttct tcacctgcga cgagagcgaa
     7321 tatgttggat gtgctcggaa agtcggatcc gcttataaaa gatgcattga cgacgatcat
     7381 agaacgcgga gacatcataa aatcattttc ggatgatgca aaagaagagg cttccggcaa
     7441 aagcaatcaa gatccgcccc cggattttaa aacactaaaa gaatatgatc cggcaattgt
     7501 ttcggttttg atcaggaata gtgaaagatc tatagaagcg ttaaaacaaa atatcgaaac
     7561 gaaatcggga accgcgctga ttgattttat cctggaagac aggcaagaac ttcggaaagg
     7621 tttatctgac ccagaaagtt ttggcgtgat catgaccgca atgaacgctt cggcatggat
     7681 caacgaaaaa atgaatgaat ggttaggcga aaaaaatgtg gcggacgtac tctctcaatc
     7741 cgtgccgaac aatgttacgt cggagatggg tcttgagcta ttggaggtag ccgatgtgat
     7801 tcgtccatat ccgcaggtag tagaatattt acagcatgta aaagatgata actttttgaa
     7861 tgagctcggg atgtttaatg gaggaaaaga agctcatcac gctatcaata attttctgga
     7921 caggtatggc atgcgttgcg ccggtgaaat agatataacg aggacgaggt ggagcgagaa
     7981 acctgttacg atcattccct taattctaaa taacatcaaa aatttgtcac gcggtgaaag
     8041 caaacggaaa tttgagcaag gaaaacaaca agcatcgcaa aaggaacaag acttattgcg
     8101 ccggttgagt caattaccgg atggcgacga aaaagtaaaa caaacaaaac gaatgatcga
     8161 cctcgttcga aatctttctg gttaccgcga atatccaaaa tacagcattg taagtcgata
     8221 cttcgtttac aagcaggctt tgctgaaaga agctgaacgg cttgcccggg caagcgttat
     8281 tcgtgataaa aaagatatat actatctcac ctttgaggaa ctgggtgatg taatacgtcg
     8341 caatacaata gaccaggagc tcgttagcaa acgaaaagat gagtatagaa gatttgaaaa
     8401 gctaactgcg ccgcgggtta taacgtctga tggagaaatc gttaatggac aatataaacg
     8461 agaacatctg ccggcaaatg ctattgttgg cctggctgtt tcttccggcg ttgtagaggg
     8521 aagagcacgc gtgatcccga gcatagaaca cgctgaactg gaagaaggag atatattggt
     8581 cacctccttt acggatccga gttggacacc attgttttta tcaataaagg gattggtcac
     8641 cgaagtcggt ggactgatga cgcacggagc agtgatcgcg cgtgaatatg gattgcctgc
     8701 actggtcgga gtggaaaatg ctaccaaacg catacacgac gggcaaacaa ttcgcgtaaa
     8761 cggaacagaa ggatatgtgg aaatcctaac gtaggacgtc gacgctgata ttgaagggaa
     8821 gtatgaaccc ggagccaaag gcatgcattt gcgctcgttc gattcaccta acttcatcga
     8881 tgcatgttta aacagtgatc acttacacaa atatttttag aagctgaaaa aagtccacca
     8941 acaaatggcg agcgatacat ttaaaataac catacacatg gtgtcaagcc ttgacggaat
     9001 gattgccaaa aaagataaca gtgtttcatg gtttgataca tccgaccact acgagaatgg
     9061 aattgcccag gaaaacaccg aggagttcct gaaaactatt gactgctatg taatgggttc
     9121 gcggacttac gagcacgctg tggaactttc agcatcttat gggtgggctt acggagacac
     9181 gccgactgtt gtactt
//
LOCUS       DASQJI010000175         3075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1243923,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000175 DASQJI010000000
VERSION     DASQJI010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243923"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VEV83_05275"
     CDS             <1..227
                     /locus_tag="VEV83_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44554.1"
                     /translation="KDLLKPVLLAAIIAIPVAYYAMHNWLENFAYRTPLQWWIFVVAA
                     LITVAIALITVSIKAVRAAIANPVDSLRTE"
     gene            395..574
                     /locus_tag="VEV83_05280"
     CDS             395..574
                     /locus_tag="VEV83_05280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44555.1"
                     /translation="MSNYDLLVAVVREKGAAASLNSSAFLVGASLMCLVALLILLTRT
                     KDKNDAAAIEEKAEA"
     gene            706..3075
                     /locus_tag="VEV83_05285"
     CDS             706..3075
                     /locus_tag="VEV83_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44556.1"
                     /translation="MFPNYFKTALRNLWKNKAFSLINIFGLALGLACSLLIMLWVNDE
                     YSIDAFHKNGSQLYSVYERQNHDGVWSAFHGTPGVMAEEMKRVLPEVQYATNYAWNEL
                     STFEANNKIIKENGNHAGEDFFKMFSYPLLEGNAINALKTPSDIAISKKMAEDFFGSP
                     AEAIGKTIKYQNSQDFKIAAVFDNVPKNSTLKFDYMLNWQAFLAGNSWAKEWTNNGPP
                     CYIMLRNGTDAKAFESKIVRFLDKYNKEQTPNDYTRLGIERFGDMYLYSDFKDGQLSG
                     GRIQYVQLFSIVAIFILLIACINFMNLTTARSVKRAKEIGVRKVVGALRSSLIRQFIG
                     EALLIVTLAVLFAILIVTLVLPQFNMLTQKAIVLPFGEPKFWLTIAGLILITGFISGS
                     YPALYLSGFNPVRVLKGTVKFSNASLWFRRGLVVFQFMLSIMLIIGTIVIRKQVDYVQ
                     SVNLGYDRENLIYVPLEGDLITKYELFKNEAVNMPGIQSMTRMTQNPTEINNGTGGVE
                     WVGKDPNSGVEFTQAAVGYDFTKTMHAQMAQGRDFSKDFATDSVGYIVNEAALKIIRY
                     KKPVGSPLTFWGSKGTIIGVIKDFHFNSLHEQINPLVLRLGENIEWGEALVRTQPGKT
                     KQALASLEKVCKELNPQFPFTYKFSDQEYQNLYKSEQVVSQLSDYFAFLAIFISCLGL
                     LGLVMFTAEQRTKEFGIRKVLGASAGTLFGLLSKEFLLLVAIALIIATPLAWLLMNNW
                     LRDYAYRIDITWWMFVIAGIVSILIALITVSFQAIKLAMANPVRSLRTE"
BASE COUNT          869 a          645 c          767 g          794 t
ORIGIN      
        1 cgaaagacct tttgaagccc gtgctgctcg cagcgatcat cgcgatacca gttgcgtatt
       61 acgcgatgca caactggctt gaaaacttcg cataccgcac gcctttgcag tggtggatat
      121 tcgtggtagc ggcgttgatc actgttgcga tcgcgttgat cactgtaagc attaaggcag
      181 taagagctgc gatcgcgaac ccggtagata gtttaagaac ggaatgatga ggtgaatggt
      241 caatggtgaa tcgtgaatgg ctgttgcggg tgaaagagcc ccagtaacga aatgagtgat
      301 gagtaatgag tgatgaatgc gtggcaaatc tgcaatctgc aatcgccaat ctggaatcct
      361 aatcctaaat cgtaaatctt aaaaactgca agctatgtct aactatgatc ttctggtggc
      421 tgttgtaaga gagaaaggcg cagccgcaag tttaaattcg tccgccttcc tcgtgggcgc
      481 atctctgatg tgcctggtgg ctttgctaat attattaacc agaacaaaag ataaaaatga
      541 cgcagctgcg atcgaagaga aggcagaagc gtgatatcat tgactgatga acaaaacaaa
      601 ggagataaca aaattgtcaa tcataaatgc taaactgtca ttctgcaatc tgcaatcgcc
      661 aatctgcaat tgtagatcgt aattcgtaaa tcgcaaatca acaacatgtt ccccaattat
      721 ttcaagaccg cactgcggaa cctgtggaag aacaaagcgt tctccctgat aaatattttt
      781 ggtctcgccc tcggtttggc ctgcagcctg ctgatcatgt tgtgggtaaa cgatgaatac
      841 agcatagatg cattccataa gaatggttcc cagttataca gtgtatacga gcgccaaaat
      901 cacgatggcg tatggagcgc ctttcacgga acgccgggcg tgatggctga agaaatgaaa
      961 cgcgttctac ctgaagtaca atatgctact aactacgcgt ggaatgagct gagcactttc
     1021 gaagcgaaca acaagatcat caaagaaaat ggaaatcatg ccggcgagga tttctttaag
     1081 atgttttctt accccttact tgagggcaat gcgataaatg cattgaagac accttcggat
     1141 attgccatct cgaaaaaaat ggctgaagat ttttttggtt caccggctga agcgatcgga
     1201 aaaacgatca aatatcaaaa cagccaggac ttcaagatcg cagccgtttt cgacaatgta
     1261 ccgaagaaca gcacgctgaa attcgattac atgctcaact ggcaggcatt tcttgcgggc
     1321 aactcgtggg cgaaagaatg gacaaacaat ggccctccgt gctacatcat gcttcggaat
     1381 gggacggacg cgaaagcatt cgagtcgaag atcgttcgct tccttgataa gtataataaa
     1441 gaacaaacac ccaatgatta tacccggctc ggtatcgaaa gatttggaga catgtacctg
     1501 tactcggatt tcaaagacgg ccaattatcg ggcggcagaa ttcaatatgt gcaactgttc
     1561 agcattgtgg ccattttcat tttgctgatc gcgtgcatca atttcatgaa cctcacaacg
     1621 gcacggtccg taaagcgtgc aaaagaaatt ggagtaagaa aagtagtagg tgcattacgt
     1681 tcgtcgctta tcaggcaatt tattggtgag gcgttattga tcgtaacact ggcggtgctt
     1741 tttgcgatcc ttatcgtaac gctggtgctg ccacaattca acatgctaac gcaaaaagca
     1801 atagtccttc cttttggcga gccgaaattc tggctcacca ttgcggggct gatcctgata
     1861 acaggtttta tctccggcag ctacccggca ttgtatctat caggattcaa cccggtgcgt
     1921 gttttgaaag gcacggtcaa attcagcaat gcgtctcttt ggtttcgccg cggccttgtg
     1981 gtttttcaat ttatgctgtc tatcatgctt atcatcggca cgatcgttat acgcaagcaa
     2041 gtagattacg tgcagtcggt gaacctcggt tacgaccgcg agaatcttat ttacgttccg
     2101 ctcgaaggtg accttattac taaatacgag ttgttcaaaa acgaggcggt caatatgccg
     2161 ggcatacaaa gcatgacccg gatgacgcaa aatcccacgg aaatcaataa cgggaccggc
     2221 ggcgttgagt gggtaggaaa ggatcccaat tcaggtgttg agtttaccca ggcagcagta
     2281 ggatatgact ttacaaaaac gatgcacgcg caaatggcgc agggcaggga tttttcaaaa
     2341 gattttgcaa cggattccgt aggctatatc gtgaacgaag ccgccttgaa gatcatacgg
     2401 tacaaaaaac ccgttggtag tccgcttacg ttttggggat caaaaggaac gatcatcgga
     2461 gtgataaaag attttcattt caattcatta catgagcaga tcaatcccct ggtacttcga
     2521 ttgggggaaa acattgagtg gggtgaggcg ctcgtgagaa cgcaacccgg taaaaccaaa
     2581 caggcgctgg caagtttgga aaaagtttgt aaagagctga atccgcaatt tccgttcact
     2641 tacaaatttt ctgaccagga atatcagaac ctgtataaga gcgagcaggt ggtgagccaa
     2701 ctgtcagatt attttgcgtt cctcgcgatt tttatttcat gcctcggctt gctcggtctt
     2761 gtaatgttta ctgcggaaca acgcacgaaa gagtttggca tcaggaaagt gttgggtgcg
     2821 agtgcaggaa ctttgttcgg attgctgtca aaggaatttt tgttattggt tgcgatcgcg
     2881 ctgatcatcg ctacgccgct tgcctggcta ctgatgaata actggttgcg ggattatgcg
     2941 tacaggatcg atataacgtg gtggatgttt gtgatagcag ggatagtttc aattttgatc
     3001 gcgctgataa cggtgagttt ccaggcgatc aaactagcca tggcgaatcc tgtgagaagt
     3061 ttgagaacgg aatga
//
LOCUS       DASQJI010000176         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_323190,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000176 DASQJI010000000
VERSION     DASQJI010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323190"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VEV83_05290"
     CDS             <1..354
                     /locus_tag="VEV83_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYK44557.1"
                     /translation="VSKRRSRYFSEDLKRKKVEELDKKLTTVSEICREYEVSHTAVYN
                     WIYKYSLMKKKGVKMVVEAESDTAKIKALRQHISELEQLLGQKQFEIDFLKKQMEIAS
                     DQYGIDLKKKRFGKP"
     gene            351..1331
                     /locus_tag="VEV83_05295"
     CDS             351..1331
                     /locus_tag="VEV83_05295"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HYK44558.1"
                     /translation="MTWYWEHRGEHRYKMNKIYGYIGYSKQAFHQRMGRKLRDHEQEL
                     LLLPIITELRQEHPGVAARQLYEMLQPEKIGRDKFERLCFEHGFKLQRSKSYRRTTDS
                     RGVIRFPNLIAAVEFTGINQAWSSDITYYQIDSTFYYITFIIDLFSRKIVGFTVSQKL
                     LTEQTTIPALSMALHNRKPPAGLIFHSDGGGQYYCNAFLKLTRAYKIKNSMCDVVYEN
                     AHAERVNGTIKNQYLRGYNPQNYSSLVKMTEKAVNNYNRIRPHQSLKKLSPEAFEKKL
                     PAGGSSLSNDDFCNFCNGSKLDQKNHHLPPRLNLTIKNEIKTLEKTVNVF"
     gene            complement(1495..>1801)
                     /locus_tag="VEV83_05300"
     CDS             complement(1495..>1801)
                     /locus_tag="VEV83_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK44559.1"
                     /translation="ALKAPHGETHGAEDILDICEQNHVPLIPFFSILTAHKKKDNRVA
                     EVASKYNATEAQINIAWLLHRSPWILPIPGTSSLKHFQENIKAVNIQLTKEDMDYLD"
BASE COUNT          590 a          324 c          393 g          494 t
ORIGIN      
        1 gtgtccaaaa ggagaagccg ttattttagc gaagatttga agaggaagaa agttgaggag
       61 ctggataaga aacttactac tgtttcagaa atttgcaggg aatatgaagt tagccatacg
      121 gcagtgtaca actggattta caaatattct ttgatgaaaa agaaaggtgt gaaaatggtt
      181 gtggaagctg aaagtgatac agcaaaaatt aaagccttaa ggcagcacat ttctgagctt
      241 gaacagttgt tgggtcagaa acaatttgag attgactttt tgaaaaagca aatggaaatt
      301 gcttctgacc aatatggcat tgatttgaaa aaaaaacgtt ttgggaagcc ctgacctggt
      361 attgggagca tagaggagaa cacaggtaca aaatgaataa gatatacgga tatatcgggt
      421 atagtaaaca agcttttcat caaaggatgg gaagaaaact tcgggaccat gagcaagaat
      481 tgctgttact tcccattatt acggagttac ggcaggagca tcccggagta gcagcaaggc
      541 aactgtatga aatgctgcag ccggaaaaga taggtagaga taagtttgag cggttatgct
      601 ttgagcatgg atttaagctg caaagaagca aatcttatag aagaacaaca gacagcagag
      661 gggtaattcg tttccccaat ctaattgcag cagtcgagtt tacaggtata aaccaggcat
      721 ggagcagcga cattacttat tatcagatcg actcaacgtt ttactacatc acttttatca
      781 tcgatttatt ttcgaggaaa attgtaggct ttactgtaag tcaaaaatta ttgacagaac
      841 aaacaacaat acctgcatta agtatggcat tgcacaatcg taagccgcct gcaggtctta
      901 tctttcattc tgacggaggt ggtcaatatt attgcaacgc atttttaaaa ctaaccaggg
      961 catataaaat caaaaacagc atgtgcgatg ttgtttatga aaatgctcat gcagaaagag
     1021 ttaacggcac aattaagaat caatatctga gaggatacaa tccgcagaat tattcatccc
     1081 tggttaaaat gactgaaaaa gcagtgaata actataatag gatccggcct catcaatcat
     1141 taaaaaaatt atcgccagag gcatttgaaa agaagttgcc tgccggcggc tcctcgttgt
     1201 caaatgatga tttttgcaac ttttgtaacg ggtccaaact agaccagaaa aatcatcatt
     1261 tgcccccgag gctgaatttg actataaaaa atgaaataaa aacacttgaa aaaacggtca
     1321 acgtatttta ggcattgaca tgttttatca accgtgaact gtcaaccgtc aactctcaac
     1381 tcgttgcgtc gcgctacaga gctgcacttg aatattgatt tattgaactc ggcattgggt
     1441 attaagtgtt gcgcacctgt caactgtcag ccgtcaactc tcaactgcca cccgtcagtc
     1501 caaataatcc atgtcttctt ttgtcagctg aatatttaca gctttaatgt tttcttgaaa
     1561 atgttttaac gaagatgtgc ccggtatagg taatatccat ggcgaccgat gaagcaacca
     1621 ggcaatattt atttgcgctt ctgtggcatt gtacttcgat gcaacttctg caacgcgatt
     1681 gtctttcttt ttatgcgcag taaggatgga aaagaagggt atgagcggaa catggttttg
     1741 ctcgcagata tccaagatat cttccgcgcc atgtgtttca ccatgcggag ctttaagcgc
     1801 a
//
LOCUS       DASQJI010000177         9280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_937496,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000177 DASQJI010000000
VERSION     DASQJI010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9280
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937496"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VEV83_05305"
     CDS             complement(<1..596)
                     /locus_tag="VEV83_05305"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HYK44560.1"
                     /translation="MKDNVSLISVPYDSAHFNERMGAGPRHVINHGLIEKIQRLGCEV
                     FFKEVITEQNFPTEIATCFELLDLIRKEIIRTKENRSLPIVLAGNCSATVAVIAGFKS
                     NDPGVIWFDAHGDCETPETTTSGFLDGMGIPMLLNRCWENLLSSYNLTASLKSENIVL
                     IGARDLSKSEEQFIKTNAIKYITVDAIRRSNIEIAKAA"
     gene            complement(797..1456)
                     /locus_tag="VEV83_05310"
     CDS             complement(797..1456)
                     /locus_tag="VEV83_05310"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HYK44561.1"
                     /translation="MSIRLNETAPDFQAETTQGPISFHEWIGDGWAILFSHPKDFTPV
                     CTTELGYMAKLEPEFQKRNCKIIGLSVDPVENHSKWAADIEETQGHAVKYPMIGDRDL
                     TVAKLYDMLPASETGTSEGRTAATNATVRSVFIIGPDKKVKLTLTYPMTTGRNFDEIL
                     RVLDSMQLTSAHKVATPVNWKNGEDVIIAGSVTDDEARQKYPEGWKSPKPYIRIVPQP
                     Q"
     gene            1909..4185
                     /gene="bglX"
                     /locus_tag="VEV83_05315"
     CDS             1909..4185
                     /gene="bglX"
                     /locus_tag="VEV83_05315"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HYK44562.1"
                     /translation="MSYRFALIFIAQFSACLLLAELNHAQNVPAGNGKRTIDEKVDSV
                     LRLMTLEEKIGQMNQYNGDWEATGPITKDGDKQNQIRNGKLGSMLNVTGVDHTRELQE
                     IAMESRLKIPLLFGQDIIHGYRTIFPIPLAEASSWDTSIIKLSARIAATEAAAAGVHW
                     TFAPMVDIARDPRWGRVMEGAGEDPYLGAVIAAARVRGFQGNGLGNTDAVMACAKHFA
                     AYGAAIGGRDYNSVDMSDHTLWEIYLPPFKAAADAGAATFMNSFNDLNGIPATGNSYL
                     QRDILKGKWNFKGFVVSDWGSIGEMINHGYAKDNYEAALEAVTAGSDMDMESRSYIDN
                     LSKLIKEGKVKHELIDDAVRRILRKKFEMGLFDDPFRFCNKEREQQQWNNADNLKAEK
                     MVAEKSIVLLKNENQLLPLSKQVRTIAFIGPFVKAVRDNLGFWSYSYADDSSRIVTQW
                     QGVQNKVGPTAKLLYAKGCGINDSSRAGFAEAIEIAKQADVVIMSIGEASDWSGEAKS
                     RSSLRLPGMQEELVKAIYATGKPIVILINAGRPLIFDWTADHVGAILYTWWLGTEAGD
                     AIADVLFGDYNPSAKLPITFPRTEGQIPIYYNHYSTGRPATSDSDRFYRSAYIDLSIY
                     PKFPFGYGLSYSHFNYSDIELSSATMKADETIIATITVTNSGNYDGEETVQMYIQDFV
                     ASVVRPVKELKGFEKIFLRKGESKQVQFRIDVNKLKFYSQRSGSDVEPKYIYEPGDFK
                     VYIGGNSQDVKESRFTLR"
     gene            4365..6218
                     /locus_tag="VEV83_05320"
     CDS             4365..6218
                     /locus_tag="VEV83_05320"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HYK44563.1"
                     /translation="MSAAKILVTAFGFVHCTYGVFCQSALSQTQTKTNRTNGAIGCRP
                     DPGDFKVDFNACKQHEVFFTNSPANGSAVSWNFGDGSTGAATNRTSHVYSAEGIYGVT
                     LIAKDAKGCRDTTVKKFLLQIDTGHIFSTKSFPLCTGTNMSLPGDSTAVQSFWSPPDY
                     LSGTDVAYPLCAPITDTRYQYNIVKRDGANLITNGNFFDGNTGFSTKYKYDSLATGAG
                     HYFISTNPHQVNPFFETCPWDTLYSFDTMMIVNGSTVPNTTVWNSKPQVTPNTNYIFS
                     FIGAALTFTTSLQLQVTINGDQVISRLGLPDTPCIRKKFMTTWFSGDDTVANIRIIDL
                     KTDSVNNSFSLDSLMLKVVALKTDSLLVSIRPTPVFSVQPASAIICPGDSVIFTGTGA
                     DQYEWFPSTTTVAATDTSGTTAFPSATTTYKVVMSENVCNVTDSVYIPVYVKAKPTVT
                     VTKSNDLSCTVTQATLYATGGIRYHWSEDSTLSGSNTPNPVASPYQTTTYHVSVTAEN
                     GCVMQDSIEVKMIRADSSTTTFVLPSAFTPNHDGLNDRFGVHYWGYVDDLRFAIYNRW
                     GKMVFYTTDTQKCWDGTYQGMPQPTGTYVYFVKGTTICGPVQRKGTVTLLR"
     gene            complement(6300..7067)
                     /locus_tag="VEV83_05325"
     CDS             complement(6300..7067)
                     /locus_tag="VEV83_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44564.1"
                     /translation="MNKHNWIFLLTTLTFATLIGCTKDDENNNEQQAITFGNAVALGD
                     DSIRSYVVTDVSGQPKEIGLQLGENALNSLPTDTSGGIREFSYPIPAPANIAGTGVNH
                     IEVDWNPYGHDPVGIYTVPHFDFHFYYVDEATQGSVTPGVDTVSVAPQYLPQDYVSGV
                     VAVPNMGVHFIDTTSAEFHGVPFTSTFIYGFYHGNFMFLEPMVTKAFFESHPDFTAPV
                     KQPQAFQIPGYYPTSYAVKYDAENHVYRIALTELTKH"
     gene            7263..7694
                     /locus_tag="VEV83_05330"
     CDS             7263..7694
                     /locus_tag="VEV83_05330"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK44565.1"
                     /translation="MQKIFSWQPLLAYGTLTAIVRIVMGVFMMYHGWEVFNKEPIDTY
                     TGWLTDMHFPQPHYWALLGKGIELVGGCFLLPGFLTRFITIPLMLDMLFIVFVLGHGK
                     IFYEDQYPLLFFLFFMYLFLAGAGKWSIDETVVQKLSAKDA"
     gene            complement(7829..8578)
                     /locus_tag="VEV83_05335"
     CDS             complement(7829..8578)
                     /locus_tag="VEV83_05335"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYK44566.1"
                     /translation="MEKKQQLVTRRSAIITGVSALGGLLISGCSSKPSPPTYGNILRM
                     GDAFTYKAQRALLPGQSLAKEFDRRDISSFPATGTTNPGDPSYRYFSKDYAQLQANGL
                     ENWRLSIEGRVARPGLYSLKDLQRFPSRTQITRHMCEEGWTAIAEWTGVPLHLVLQSA
                     GILKTARYVNFYGFDGYMESVDMLDAFHPQTILAYAMNGRDLPLQHGAPLRARVETQV
                     GYKSAKYLQRILVTDEFVDQGNTGWAWYVGI"
     gene            complement(8607..>9280)
                     /locus_tag="VEV83_05340"
     CDS             complement(8607..>9280)
                     /locus_tag="VEV83_05340"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HYK44567.1"
                     /translation="SFLLLVFSGVEILMVHPRLYWGDVGNDLTPALFELPISRNYHHG
                     GWEKTQPFYDYANSPISASRTYDIFNQNGWGRSLHFLSAWFLVAIGLVYLVAAIFSGH
                     VYRNLLPKVKELSPRSFYRDIAGHMKMKIRFAKGPQYGPLQKLSYISVIFLLLPLIVL
                     TGLTMSPAITASYPFLLTIFFGVQSARTIHFFAAVLLVLFLIVHVVMVIRSGFRQHMR
                     AMTFG"
BASE COUNT         2592 a         2026 c         2151 g         2511 t
ORIGIN      
        1 aaggcagctt ttgcgatttc aatatttgag cgccttatcg catcaacggt gatatattta
       61 attgcgtttg ttttgatgaa ttgctcttcg gacttgctca gatcgcgtgc gccgatcaat
      121 acaatatttt cacttttcaa agatgcagtg aggttatacg aggaaagtaa attttcccag
      181 caacgattca ataacatcgg tattcccatg ccatccaaaa aaccactcgt tgttgtttcc
      241 ggcgtctcac aatccccatg agcatcgaac catatcacgc caggatcatt gcttttaaat
      301 cctgcgatca cggccactgt cgccgagcaa tttccggcta agacaatagg caacgatcga
      361 ttttctttcg tacgaattat ttcctttcgt atcaggtcaa gcagttcaaa acaagttgcg
      421 atctcggttg gaaaattttg ttctgttatg acctccttaa aaaaaacttc acacccgagc
      481 ctttgtattt tttcaattag tccatgattt ataacgtgcc ggggacctgc ccccatgcgt
      541 tcattaaaat gggccgagtc gtatggtacg gatatgaggc taacattatc tttcatcggt
      601 cagcaaaatt aattcacgct gattttccga aaaggcgtga cgtagcgcaa aaacaaaact
      661 gtcattacaa gcggtattca ttattgcgat gataataatg cagacactca agccgacaac
      721 accaaatgct tagtgtcttt gtagattgcg gcgtccaacc aatccaccat taaccaaata
      781 aactaataga ctttctttac tgcggctgag gtacgattcg gatgtatggt ttcggtgatt
      841 tccagccttc gggatatttc tgtctcgcct cgtcatctgt tacggagccg gcaataatta
      901 catcctcccc gtttttccaa ttgaccggcg tagcaacctt atgtgcagag gtcaactgca
      961 ttgaatccaa aacgcgaagt atttcgtcaa aattgcggcc tgttgtcatt gggtaggtta
     1021 gcgtcagctt tactttcttg tccggtccga taataaacac cgagcgtacg gttgcattgg
     1081 tagcagcggt cctgccttca gaagtacctg tctctgacgc gggcagcata tcgtaaagtt
     1141 ttgctacagt caagtcccga tcgccgatca tgggatattt aaccgcatgc ccttgtgttt
     1201 cttcgatgtc ggccgcccat tttgaatgat tttccaccgg gtccacacta aggccgatga
     1261 tcttgcaatt tcttttctga aactcaggtt caagctttgc catgtatccc aattccgtcg
     1321 tgcaaacggg tgtaaaatct ttgggatgag agaaaaggat cgcccagcca tcgccgatcc
     1381 attcgtgaaa actgatgggg ccctgagtag tttccgcctg gaaatcaggc gcagtttcat
     1441 tgagacgtat tgacataaat tgtagctttt agttgtttca aatttagggc gacgaaatta
     1501 gtcaaatttt aataactaca aagcgcgctg tgacgaaaga attaatagag gcaacgtttt
     1561 gtgctattaa ttttcagagt gtgcggctca ttttcttagt tctttgtgtc ttggtctcag
     1621 tggttcaaaa aaacaaaccg ctaagacacc agggcaccaa gtttcataaa gtctggcctg
     1681 ttttccacct acaccatctt tcattcttaa tagcacaacg cgttagcggt aacgtttcgt
     1741 gtaaccattc ctttgcctgc tttgcgcgtt ctgaagattg ttcgttgaga taaacggcca
     1801 tttccgtttg atgatttgct tgttttatct tcagcatttt gcttgcgtcg atttttggta
     1861 aagttgtaaa ttgaaaatat accttgacgg tgtaaaatga aaaataagat gtcttaccgc
     1921 ttcgcgttga tttttatcgc tcagttttct gcttgcttac tgctagccga gttgaaccac
     1981 gcgcagaatg tgcctgccgg aaatggaaaa agaactatcg atgaaaaagt tgattcagtg
     2041 ctccgattaa tgacacttga agagaagata gggcagatga atcaatacaa cggcgactgg
     2101 gaggcgacgg gtccgatcac aaaagacggc gataagcaga accagattcg caacggcaag
     2161 ttaggctcca tgctaaatgt taccggtgtt gatcacaccc gcgagttgca ggaaatagca
     2221 atggaatcaa gactgaaaat tccgttgttg tttggccaag acattattca tggataccga
     2281 actattttcc cgataccatt ggcagaggca tcgagctggg atacttctat tattaaacta
     2341 tctgcgcgca tcgctgccac cgaagcggca gccgctggtg tgcactggac atttgcccct
     2401 atggttgaca tcgcacgtga tccgaggtgg ggacgagtaa tggaaggggc aggtgaagat
     2461 ccatacctcg gcgcagtgat cgctgctgcg cgtgtgcgcg gcttccaggg caacggttta
     2521 ggtaacaccg acgccgtgat ggcttgcgca aaacattttg cagcttacgg tgccgctata
     2581 ggaggccggg attataattc tgttgatatg agtgaccaca cattgtggga gatctatttg
     2641 ccaccgttta aagcggcggc cgatgcgggc gcagccacat tcatgaattc gttcaacgat
     2701 ttgaatggga tacctgcaac gggcaatagt tatctccaaa gagatatttt gaaaggcaaa
     2761 tggaatttca aagggtttgt tgtaagcgac tggggttcga tcggcgagat gatcaatcat
     2821 ggttatgcga aagataatta tgaagctgct cttgaagctg tgaccgcggg cagcgacatg
     2881 gatatggaaa gccggagcta tatcgataat ctatcaaaac tcataaaaga aggaaaagta
     2941 aaacatgaat tgatcgatga tgctgtgagg cgcatccttc gaaaaaaatt tgaaatgggc
     3001 ttgtttgatg acccattcag attttgcaat aaagaaagag agcagcagca atggaacaat
     3061 gctgataatt taaaagcaga aaaaatggtc gctgaaaaaa gtattgtgct gttgaaaaat
     3121 gaaaatcagt tgttgccgct tagtaaacaa gtaagaacga tcgcgttcat cggtccattc
     3181 gtaaaggcgg tgagagataa tctcggattt tggtcgtact catacgccga cgattcttca
     3241 cgcatcgtta ctcaatggca gggtgttcaa aataaagtgg ggccaaccgc gaaattgtta
     3301 tacgcgaaag gatgcgggat caatgatagt tcacgtgccg gttttgctga agcaattgaa
     3361 atagcgaagc aggcagatgt tgttatcatg agtataggcg aggcgagtga ctggagtggc
     3421 gaagctaaga gtcgcagcag tctgcgtttg ccgggcatgc aggaggagct cgtaaaagcg
     3481 atctatgcaa caggtaaacc aatagttatt ttgatcaatg caggaaggcc tttaatattc
     3541 gactggactg cggatcacgt tggcgcaatt ttatacacgt ggtggttggg taccgaagct
     3601 ggtgatgcga tcgccgatgt attgtttggg gattacaacc cttccgcaaa attgccgatc
     3661 acttttccga ggaccgaagg ccagataccg atctattaca accattacag caccggtcgg
     3721 cctgcaacaa gtgatagcga cagattttat cggtctgctt acatcgatct ttccatctat
     3781 ccgaaatttc cgtttggata cggcttgagc tatagccact ttaattacag cgatattgag
     3841 cttagtagcg caacgatgaa ggctgatgaa actattatcg caacaatcac ggtaactaat
     3901 tcaggcaatt acgatggtga agaaacggtg cagatgtata tacaagactt cgttgcatcc
     3961 gttgttagac cagtgaaaga attgaaagga tttgaaaaaa tatttttgag aaaaggagaa
     4021 agcaaacaag tgcaattcag gatcgacgta aacaaactga aattttatag tcaacgctct
     4081 ggcagcgatg ttgaaccaaa atacatttat gagccgggtg attttaaagt ttacataggt
     4141 ggtaactcgc aagatgtaaa ggaatcacgt tttacattga gataatgcaa ccacaagatt
     4201 tctcttgatt tcgctctgat atgagatggt gaacggtgca agacgataaa ctaataggcc
     4261 ccggttaaca ctaatcatat gctgtgtgcg ttaatttttc ttttggtaac ttgaaaatta
     4321 ttgtatcttt ccctcagtaa aatccatttc ctaacaggaa gaacttgagc gctgcgaaaa
     4381 ttttagtaac tgcttttggc tttgtacatt gtacatatgg cgtgttttgc caatccgctt
     4441 tgtctcaaac gcaaacaaaa accaaccgca ccaacggtgc aatcggctgc cggccagacc
     4501 ctggcgattt taaagttgat tttaatgcat gtaagcaaca cgaagttttt tttacaaaca
     4561 gtcccgccaa cggatccgcc gtatcatgga attttggaga cggctcaacg ggcgcagcaa
     4621 caaacaggac atcccatgta tatagcgccg agggtattta cggagtaaca ctcattgcga
     4681 aggatgccaa gggatgccgt gataccacag tgaaaaaatt cctgttacaa attgatacgg
     4741 ggcatatttt ttcaaccaag agtttcccgc tttgtacagg caccaatatg agtttaccgg
     4801 gcgattccac agcggtccaa agtttttggt cgccgccaga ttatctgagc ggcacagacg
     4861 ttgcttatcc tttatgcgct ccaataacag acacaaggta tcagtataac attgtgaaac
     4921 gtgacggcgc caatctcatt acgaatggaa actttttcga tggaaacacg ggcttcagta
     4981 caaaatataa atatgatagc ctggctactg gtgcaggcca ctactttatt agcaccaacc
     5041 cgcatcaggt gaaccctttt tttgaaactt gcccgtggga cacactgtat tcattcgaca
     5101 caatgatgat tgtgaacggc tcaacagtgc cgaatactac cgtttggaat tcgaaaccac
     5161 aggtcacgcc aaatacaaat tacattttct catttattgg cgccgcgctc actttcacaa
     5221 cttcgctgca gttacaggta acgattaatg gcgaccaggt catcagtcgg ctcgggctgc
     5281 ctgatacgcc atgcattcga aaaaaattta tgactacatg gttctcgggt gatgataccg
     5341 tagcaaacat tcgaatcatc gatctaaaaa cagactctgt aaacaacagt ttttctttag
     5401 atagtttaat gctcaaagtt gttgcactta aaacggattc cttattggta agtataagac
     5461 caacaccggt gttttctgtg cagccggcat ccgctatcat ttgtccgggt gactccgtaa
     5521 tcttcaccgg taccggcgct gaccagtacg agtggtttcc gtcgacaacg acagttgctg
     5581 cgacggacac atcgggcaca accgcgtttc catcagctac aacaacgtac aaagttgtaa
     5641 tgtcagaaaa tgtgtgcaac gtgacggatt ctgtatacat acctgtctat gtaaaagcaa
     5701 aaccaacagt aaccgtgacg aaatcgaacg acctgagctg caccgtaacg caggcgacac
     5761 tgtatgcaac gggcggcatc agatatcact ggagtgaaga cagcacatta tccggtagca
     5821 atactccgaa cccggtagca tcgccttacc aaactacaac ataccatgta tcagtaaccg
     5881 cggaaaacgg ctgtgtaatg caagattcga tcgaggttaa aatgataagg gcagacagca
     5941 gcactaccac ttttgtgttg ccatctgcat ttactccaaa tcacgacggc ctcaatgatc
     6001 gttttggtgt gcactattgg ggctacgtcg atgatctgcg atttgccatc tacaaccgtt
     6061 ggggcaaaat ggtgttctat actactgaca cgcaaaaatg ctgggacgga acataccagg
     6121 gaatgccgca acctaccggc acctacgttt atttcgtaaa aggaactact atttgcggac
     6181 cggttcaacg caaaggaaca gtgacgctgc tgcgataacc aagctcgccg gccctttaca
     6241 accggcaatt tttcaaaaga aaagaaagaa aggccgaaga aatttctccg gccccagaat
     6301 taatgtttag taagctcggt caatgcgatc ctgtatacat gattttccgc gtcatacttt
     6361 accgcgtatg aagtagggta ataacccgga atttgaaatg cctgcggttg tttaacaggc
     6421 gctgtaaaat ccggatgcga ttcaaaaaac gccttcgtga ccatcggctc taagaacatg
     6481 aagttaccgt gataaaatcc gtagataaat gttgatgtga aaggcacgcc gtgaaattcg
     6541 gctgacgtcg tatcaataaa atgaacgccc atgttaggaa ccgcaaccac accggagaca
     6601 taatcctgag gtaggtattg cggtgcgacg gaaaccgtat caactccggg agttaccgat
     6661 ccctgggttg cctcgtcaac ataataaaaa tgaaaatcaa aatgagggac cgtgtaaatg
     6721 ccgaccgggt catggccgta cgggttccaa tcaacttcaa tgtgattaac gcccgttccc
     6781 gcaatgtttg ccggggctgg tatcgggtaa gaaaactcgc gaattccgcc agaagtatcc
     6841 gtcggaaggg agttcagtgc attttcgccc aactgtaagc caatttcctt gggttgcccg
     6901 cttacatccg ttacaacgta tgagcgaata ctgtcatcgc ccaacgcaac ggcatttccg
     6961 aatgtaattg cctgttgttc attgttgttc tcgtcatctt tggtgcatcc gataagtgta
     7021 gcgaaggtta gcgtcgtcaa tagaaagatc caattgtgtt tgttcatatc tgtgttttta
     7081 aaaaggttac ttaagtcgcg tcgggaacaa aacgttttcg ggagaaaaat attttacgca
     7141 ttaagcgtgc gacaggaaat ataggaagcc tttaattatt ccgagaggtc aaccgccagg
     7201 ccagcagttt gcgaatcatt tttactcagg attttttttt agttttcgtc caaacaacct
     7261 gtatgcaaaa aattttttcg tggcagccat tgcttgctta cggcacgctg actgcgatcg
     7321 ttcggattgt catgggcgtt ttcatgatgt atcatggatg ggaagttttt aataaggagc
     7381 cgatcgatac ttacaccggt tggcttacag acatgcactt tccgcagccg cattattggg
     7441 cgttgttggg taaaggaata gaattggtgg gcggatgttt tctgctgcca ggatttttaa
     7501 cgaggttcat aacgattcct ttaatgcttg acatgctctt catcgtattt gtgttggggc
     7561 atggtaaaat tttttatgaa gatcaatatc ctctattgtt ctttttattc ttcatgtatt
     7621 tatttctcgc aggtgcgggt aaatggagca ttgatgaaac ggttgttcaa aaactgagtg
     7681 cgaaagatgc ttgaggaaat ttttgtgtaa aaaaatgaag caggacctta ctcgggaatc
     7741 ataagttatg tttcattgca atgttgctct tcatcaacac tcagcgcatg gctgggaatt
     7801 caagtacatc gattggtttc ttaaactttt aaattcccac ataccacgcc caacccgtgt
     7861 tgccctggtc gacaaattcg tctgttacga gaatgcgttg caaatatttt gcactcttat
     7921 aaccgacctg tgtttcaact cttgcacgca atggcgcacc gtgttgcaga ggcagatcgc
     7981 gaccgttcat agcataagca agaattgttt gcgggtgaaa tgcatccagc atatccacgc
     8041 tttccatata gccgtcaaat ccatagaagt ttacgtaacg tgcagtctta agaataccgg
     8101 cactttgtaa aacaaggtgc agtggtacgc cggtccattc ggcaattgca gtccatcctt
     8161 cctcacacat atgtcgggtg atctgggtgc gtgatggaaa tcgctgaagg tctttaagcg
     8221 agtatagccc tggccttgca acgcgccctt cgatcgaaag ccgccaattt tctaaaccgt
     8281 tggcttgaag ttgagcgtag tctttactga agtagcgata cgagggatcg ccgggattcg
     8341 ttgtgcctgt cgccggaaaa gaagaaatgt cgcgacgatc aaattctttt gcgagggact
     8401 ggcccggcaa cagtgcgcgt tgcgctttgt aggtgaacgc atctcccatc cttaaaatat
     8461 tgccgtaagt gggcggcgat ggttttgacg aacatccgct gatgagcaat ccgcccaaag
     8521 cagagactcc tgtaatgatc gccgatcgtc gtgtaacaag ttgttgcttt ttttccatct
     8581 gttctttttt cagttgatag atgcggctat ccaaaagtca ttgcccgcat gtgttgcctg
     8641 aatcctgatc tgatgaccat aacaacgtgc acgatcaaaa acagcactag caaaacagca
     8701 gcaaaaaaat gaatggtacg cgcagattgt actccaaaaa aaattgtcag cagaaacgga
     8761 taagaagctg tgatagccgg agacatcgtg agtccggtta atactatcag cggcaacagc
     8821 aaaaaaatga cgctgatgta actgagcttt tgcagcggtc catattgcgg acctttggca
     8881 aatcggattt tcattttcat gtggcctgca atatcacgat agaacgaccg cggtgacaac
     8941 tctttcacct tgggcagaag attacgatat acatgcccgc tgaaaattgc ggcgacgagg
     9001 tagaccaggc cgattgcaac aagaaaccat gccgacaaaa agtggaggct tcggccccaa
     9061 ccgttttgat tgaaaatatc atatgtgcgg cttgcgctga ttggagaatt ggcataatca
     9121 taaaacggct gcgtcttttc ccaaccgcca tgatgatagt tacgactgat cggtaattcg
     9181 aaaagcgcgg gcgtaagatc attgcccaca tcgccccagt aaagccgtgg atgcaccatc
     9241 aatatttcta ctccgctgaa tacaagcagc aaaaaactca
//
LOCUS       DASQJI010000178         5550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_937890,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000178 DASQJI010000000
VERSION     DASQJI010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5550
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937890"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1230
                     /gene="glpK"
                     /locus_tag="VEV83_05345"
     CDS             <1..1230
                     /gene="glpK"
                     /locus_tag="VEV83_05345"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HYK44568.1"
                     /translation="RKTGAPLYNAIVWQDRRTASYCDELKQEGHASMIQQKTGLIIDA
                     YFSATKLKWVLDHIDGAREKAANGELCFGTIDTWLLWNLTQGKVHATDVTNASRTMLF
                     NIHSLQWDDDLLSLFDIPRSVLPQVRSSSETYGHTQNILSAKNIPVAGIAGDQQAALF
                     GQMCTQPGMVKNTYGTGCFMLMNTGEQPVLSKNNLLTTIAWQLKGKTVYALEGSVFIA
                     GAVVQWLRDGLGIISNSSHVEQLAKEVTSGDGVYLVPAFAGLGAPYWNQHARGTIVGI
                     TRGTTSAHIARAALESIAYQTMDVINAMQADANITVKELRVDGGATANDLLMQFQSDL
                     LNTKVIRPKITETTALGAAYLAGLAVGYWQSVDEVASQWQVEKTFEPQMPQNQTADLI
                     KGWKRAVRAVQGWSEDV"
     gene            complement(1459..2133)
                     /gene="mnmD"
                     /locus_tag="VEV83_05350"
     CDS             complement(1459..2133)
                     /gene="mnmD"
                     /locus_tag="VEV83_05350"
                     /inference="COORDINATES: protein motif:HMM:NF033855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD"
                     /protein_id="HYK44569.1"
                     /translation="MSDRILQVTADGSHTISIPALNVSYHSRYGAIQESRHVFIEAGL
                     QCFLDFANIPPEEAVKIFEVGFGTGLNALLSLIEAVRMPRKIYYNAVEPFPLSIDEVE
                     KLNYVSLLSKNLSREFMRMHEGPPDNEIAIHPYFSFKKSNIIELETEEKFHVIYFDAF
                     DPNVQPGLWTQHIFRKMFNMLEPNGLLTTYSSKGAVRRALQAAGFKVEKLPGPAGKRE
                     MIRARK"
     gene            2216..2791
                     /locus_tag="VEV83_05355"
     CDS             2216..2791
                     /locus_tag="VEV83_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III"
                     /protein_id="HYK44570.1"
                     /translation="MMATIVSNERKRIHPHKFTLWVAMGSIIMMFAGLTSAYLVRRAQ
                     ANWLSFQLPPIFWISTLVILLSSLTIHLSLKSFKARAMRRYRLLITITAALGVLFAAL
                     QYSGFNYLYRHGVQVFGEGSNPAASFLGVIIGLHALHVVGGVIALLVIFINAYRTKIK
                     SYNATPIEIASTYWHFVDILWIYLFIFLKWL"
     gene            2872..3546
                     /locus_tag="VEV83_05360"
     CDS             2872..3546
                     /locus_tag="VEV83_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HYK44571.1"
                     /translation="MATTTATTPRMWNGGRSPFNVEYGKLMMWYFLMSDAFTFGAFLI
                     SYGTTRFATNGWPNPNHVFNSYPMSGAFKAPLVFVSLMTFILIISSVTMVLAVHEGHN
                     MNRKGVAKYLFLTILGGLAFLGCQAWEWTHLYHEGAWWGRNPFPNSDGTISTTNFTNF
                     FFTITGFHGFHVFSGVIINIIMLIMVLKGTFDRRGHYLMIEKAGLYWHFVDLVWVFVF
                     TCFYLI"
     gene            3558..3977
                     /locus_tag="VEV83_05365"
     CDS             3558..3977
                     /locus_tag="VEV83_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HYK44572.1"
                     /translation="MEHTIESLAQEHHVGGGRKEIYRVTIILTVFTLVELALGFYLMN
                     VTNELMRHFIKGVIIIFMLAKAFYIVGYFMHLRHEIRNLIMTIVVPLFLFVWFITAFL
                     SDGNSFKNLKNSLDRGHKERSEQPAPVKKEGEEHKME"
     gene            4020..4853
                     /locus_tag="VEV83_05370"
     CDS             4020..4853
                     /locus_tag="VEV83_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYK44573.1"
                     /translation="MRWFFLSIMNQKAILAVCLAVLVPLISYIWVKQASDKAIEMPRH
                     YLPDTVITRVEKGKSVNDTVWHRAANFHLVNQLGDTVSLYSLQGKLIVMDYFFTSCRS
                     TCPILTRNMLNMQRSFMKGGDAMAKPDSSIVQFISFSVDPETDSVPRLKNYADHYGVD
                     PGNWWMLTGNRDSIYSYAFNELKVDKFDTVPVNPDFVHTTRFVLIDKNFNIRGYYDGT
                     DSLSLDKLSKDIGLLMLSTDDNPEQLPFDPVLLVIFFAITIVATIFAVRLIFRKKTAD
                     A"
     gene            4846..5439
                     /locus_tag="VEV83_05375"
     CDS             4846..5439
                     /locus_tag="VEV83_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HYK44574.1"
                     /translation="MRELLQPVITKNDKQARLLILVFSFVVFAAVSFLTKLKLDVNPG
                     FDVHVFALANAIINSVIAVLLIAALIAVKSNNYLLHKRIMLTALALSVIFLISYVTHH
                     LLAGEAIYGDADHDGILSDTEAQAVKSTRLIYLIILLTHIFLAAIILPFILFTAYRAL
                     IAEFPRHKKLARITWPLWLYVSISGPVVYWMIHPYYR"
BASE COUNT         1444 a         1224 c         1267 g         1615 t
ORIGIN      
        1 cgaaaaaccg gtgcgccctt gtataatgca attgtatggc aggaccggcg aactgcttct
       61 tattgcgacg agctgaaaca ggaaggccat gcttcaatga tccagcaaaa aacgggattg
      121 ataatcgatg cctatttttc agcaacgaaa ttaaaatggg tgctcgatca tattgacgga
      181 gcacgggaaa aagcggcaaa cggcgaacta tgttttggaa cgatcgacac ctggcttcta
      241 tggaatctta cccagggaaa agttcatgct actgatgtta caaatgcatc gaggacgatg
      301 ctgtttaata ttcacagcct gcaatgggac gatgacctgc tttcattatt cgatataccc
      361 aggtccgttt tgcctcaggt gcgcagcagc agcgaaacat acgggcatac tcagaacatt
      421 ttaagtgcga aaaatattcc cgttgccggc attgcaggtg atcagcaggc agcgttgttc
      481 ggacaaatgt gtacacaacc gggtatggta aaaaatacct acggtaccgg ctgttttatg
      541 ttgatgaaca ctggtgaaca accggtgctt tcaaaaaata atctgcttac cacgatcgcc
      601 tggcaactaa agggaaagac agtgtacgcg ctggaaggaa gtgtgtttat cgccggcgct
      661 gttgtgcaat ggctgcgcga tggtttgggc atcatctcca attcatcgca cgttgaacaa
      721 cttgctaaag aagtaacgag tggtgatggt gtttacctcg tgcctgcttt tgccggcctc
      781 ggtgcgccgt actggaatca gcatgcgcgc ggaacgatcg ttggcatcac acgcggaaca
      841 acatccgcgc atatcgcgag agctgcttta gagagtatcg cctatcagac catggatgtt
      901 ataaacgcca tgcaggcaga cgcgaatatc actgtcaaag aactacgtgt tgatggcggc
      961 gccactgcaa atgatctctt aatgcagttt caaagtgatc tgctgaacac gaaagtgatc
     1021 aggccaaaga tcaccgaaac aacggcgctg ggcgcggctt atctggcagg cctagctgtt
     1081 ggatactggc aaagcgtgga cgaagttgca agtcaatggc aggttgaaaa aacttttgaa
     1141 ccgcagatgc cacagaatca aacagcagac ttaataaaag gctggaaacg cgcggtgaga
     1201 gcggtgcagg gttggagcga ggatgtttga gagttaagta gtttattggg ttattgggtt
     1261 attaggtatt cggttgttag gtgttcacgg aatgtttttt ctcatttctt ttttattctg
     1321 ctctgcttct cttttgcctt tatttttggt tcttcttttt tgtttcttgt tttttggttc
     1381 ttgtaatttg cttcttgttt tttggttctt gtgatttggc tcttgtaatt tgatttcgca
     1441 acaagtcatc attcaccctc atttcctcgc cctgatcatc tctctcttcc ccgccggtcc
     1501 gggaagtttt tcaactttga aacctgccgc ctgcagtgct cttcgaactg cgcccttgct
     1561 gctgtaagtg gtaagtagtc cgttcggttc aagcatatta aacattttgc gaaatatatg
     1621 ttgtgtccac aaccccggtt gcacgtttgg atcgaatgca tcaaaataaa taacatgaaa
     1681 cttctcttcc gtctcaagct cgatgatatt tgattttttg aatgagaagt atggatgaat
     1741 agcgatctca ttgtctggcg ggccctcatg cattcgcata aattcacggc tgagattttt
     1801 gctcaacaaa gagacgtaat tcagcttttc tacttcgtcg atggacagtg gaaacggttc
     1861 aacggcatta tagtaaattt tgcgaggcat gcgaaccgct tcaatcaacg acagcaaggc
     1921 gttcaacccg gtgccaaaac caacttcaaa aattttgaca gcttcctccg gcgggatgtt
     1981 tgcaaagtcg aggaaacatt gtaatcctgc ctcaatgaac acatgcctgc tttcctgtat
     2041 cgctccgtaa cggctatgat aactcacatt gagcgcaggt atcgagatcg tgtgcgaacc
     2101 gtcagctgtg acttgtaaaa tgcgatcgct catgaggcaa aagttaggac ttatcatcta
     2161 aaaatttgaa tcagaaactc aggcgctcag cgtaaatttg cggcaatccg aaaaaatgat
     2221 ggcgacaatt gtaagcaatg agagaaaaag gatccatccg cacaaattca cgctttgggt
     2281 ggcaatgggg agtattatca tgatgtttgc tggtttgaca agcgcctacc tcgtgcgccg
     2341 ggcgcaggct aattggctaa gctttcagtt accgcccata ttctggatct ctacgcttgt
     2401 tattttactc agcagcctaa ccatacatct ttcactaaaa tcattcaaag caagggcaat
     2461 gaggcgatat cgtttgctca taacgatcac cgccgctctt ggcgtactat tcgccgcgct
     2521 gcagtactca ggcttcaatt acctatatcg gcatggtgta caggtcttcg gggagggcag
     2581 taacccggca gcatcttttc tcggcgtcat tatcgggttg catgcgttac acgttgttgg
     2641 tggcgtaatc gctttactgg tgatcttcat taacgcatac cgcacaaaaa taaaatcata
     2701 caatgcgaca cccattgaga tagcaagcac ttattggcat tttgtagata tcctgtggat
     2761 ttatttgttc atatttctca aatggttata agtgcagaaa aaacttgtgc tgatttatta
     2821 tttttgatgc tcagccaata actttgccac catacaatca ctaaaatcaa gatggctaca
     2881 acaactgcaa caacacccag gatgtggaat ggaggaagaa gtccgttcaa tgttgagtat
     2941 ggaaagctga tgatgtggta ttttttgatg agtgacgcct ttacgtttgg cgccttcctg
     3001 atctcttatg gcaccacgag gtttgcaaca aacggttggc cgaacccaaa ccatgttttt
     3061 aattcctatc cgatgagtgg cgcattcaaa gctccgctgg tgtttgtgag cctaatgacg
     3121 ttcatcctga tcatcagctc cgtcactatg gtgcttgctg tacacgaagg ccataatatg
     3181 aaccggaagg gagttgctaa atatcttttc ctgacaattt taggaggcct tgcattttta
     3241 ggatgccagg cgtgggagtg gacacatctc tatcatgaag gagcgtggtg gggacgcaat
     3301 ccttttccaa actcagacgg cacgatcagc actacaaatt tcaccaactt cttttttacg
     3361 ataactggct ttcacggctt ccatgtattc tcgggtgtaa ttataaacat catcatgctg
     3421 atcatggtac tcaaaggcac gtttgaccgg cgtggccatt acctgatgat cgagaaagcc
     3481 ggtttatact ggcattttgt tgacctggtt tgggtgtttg tgttcacttg tttttatctt
     3541 atttaaaaaa tattctgatg gagcatacta tcgaatcgtt agcgcaggaa catcatgtcg
     3601 gaggaggaag aaaggagatt taccgggtta ccataattct tacagtcttt accctcgttg
     3661 aacttgcatt gggcttctac ctcatgaatg tgacgaacga attaatgagg cattttataa
     3721 aaggggtcat catcattttc atgttggcaa aagctttcta tatcgtggga tattttatgc
     3781 acctgcgaca tgagatcagg aacctgatca tgacgatcgt cgtgccgctg tttttgttcg
     3841 tctggttcat cactgctttt ctgtccgatg gcaattcgtt taaaaacctc aaaaacagcc
     3901 tcgatcgcgg acacaaagaa cgcagtgaac agcccgcacc ggtcaagaaa gagggtgaag
     3961 agcataaaat ggagtaatcg taaatgttta aataattgtt ttcaaaccat cgctttcctt
     4021 tgcggtggtt ttttctttcc atcatgaatc aaaaagcaat attagctgtt tgcctcgcag
     4081 ttcttgttcc actgatcagc tatatctggg taaagcaggc aagcgataaa gcgatcgaaa
     4141 tgccacggca ttatttgccg gatacagtga tcacgcgggt agaaaaaggt aaaagcgtca
     4201 acgacactgt atggcacagg gccgctaact ttcatctcgt aaaccagctc ggcgatacgg
     4261 tgagcctgta ttcattgcag gggaaattga tcgtgatgga ttattttttt acatcgtgcc
     4321 ggtcaacctg ccccattctc acgcgaaata tgctgaacat gcagcgttcg ttcatgaaag
     4381 gtggcgacgc gatggccaaa ccggattcat ccattgtgca gttcatatcg ttttctgttg
     4441 acccggaaac tgactcagtt ccgcgcttaa aaaattatgc tgatcattat ggcgttgatc
     4501 ccggcaactg gtggatgctg accggcaatc gcgattcgat ctatagctat gcgttcaacg
     4561 aattgaaggt ggacaagttt gacacagttc ctgtgaaccc ggactttgtt catactacga
     4621 ggtttgtttt gatcgataag aatttcaata tacgcggcta ctacgacggc accgattcgt
     4681 tatcgcttga taaattatca aaagacatcg gccttttgat gctgtcgacc gatgataacc
     4741 ctgaacagtt gccgttcgat cctgtactac tcgtcatctt cttcgcgatc actattgttg
     4801 caaccatatt tgctgttagg cttatctttc gaaaaaagac tgctgatgcg tgaattgttg
     4861 caaccggtca ttacaaaaaa tgataaacaa gcgaggctcc tgatccttgt tttttcgttt
     4921 gtcgtattcg cagctgttag tttcctgaca aaactaaaac tggatgtaaa tcccggcttc
     4981 gatgttcacg tattcgcgct ggcaaacgca ataattaatt cggtcatcgc ggttttattg
     5041 atcgcggcac tgatagcagt gaaatctaat aattatcttt tgcataagcg gatcatgctg
     5101 acagcgctgg cactctctgt tatctttttg atctcctacg taacacatca tttgcttgcc
     5161 ggtgaagcga tttatggaga tgccgatcat gacggcatcc tcagcgacac ggaagcacaa
     5221 gctgttaaga gcacgcgatt aatttatctt atcatcttgc tgactcatat ctttcttgcc
     5281 gccatcatcc tgccatttat tttatttacc gcgtaccgtg cactaattgc agaattccca
     5341 cgacataaga aacttgcacg tatcacctgg ccgctctggt tgtacgtttc tatcagcggg
     5401 cctgttgttt attggatgat tcatccgtat taccgttagg gcactacgaa aatcaaatta
     5461 accctggtca atccgcactg cctctttaag caactttaca attgcagctt catcaatttc
     5521 ctccggcgat ctatagattt tgtaaaagac
//
LOCUS       DASQJI010000179         4132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_784403,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000179 DASQJI010000000
VERSION     DASQJI010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4132
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784403"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VEV83_05380"
     CDS             <1..271
                     /locus_tag="VEV83_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HYK44575.1"
                     /translation="SDAAIILPGGYGTMDELFEMITWNQLNIHDKKIVLLNSDGYYDH
                     LIAHIDRMQEQNFLYEDSLKSLLIIPDSQALASLMDEDKNRTLPE"
     gene            complement(201..833)
                     /locus_tag="VEV83_05385"
     CDS             complement(201..833)
                     /locus_tag="VEV83_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44576.1"
                     /translation="MMKKWLLLFVLVSAIEVLQAQDRDNGEGNGGFKKENVFLGGSIS
                     LGFGSGSFGIGANPEVGYSLAQWLDAGLVFNINYLSQKYYGDPYSHDISVSNFNYGGG
                     PFLRIFPLPFLFAQFQLEHNWTNSTTKDLVTNETAKYTVGATSLLAGIGYGQRAIGQG
                     GFFTFIGIDLLTDPYSPYRDAYGGAIPVIRGGYDFYLRPSRKPRPESRVL"
     gene            complement(875..2281)
                     /locus_tag="VEV83_05390"
     CDS             complement(875..2281)
                     /locus_tag="VEV83_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HYK44577.1"
                     /translation="MNKETDNVELINALQTICGINHVFADDEARHYYGHDETEELLYL
                     PEVVVKPSTADEISSIISYCNERKIPVTPRGAGTGLSGGAIPHTGGIVLSIERLNKII
                     DIDERNLQVTTEPGVITEVLQNAVKEKGLFYPPDPASRGSCLIGGNIAEGSGGPKAVK
                     YGVVKDYVLNLQVVLPTGEIIWTGANVLKNSTGYNLTQLMIGSEGTLGIVTKIVLRLI
                     PLPKYDLLMLAPFASLEKASEVVSAIFKAGFTPSALELVEIDALQIVSRMIDRHIVPV
                     SDDVAAHLIIEVDGNDLNVLMTEMEAIAQLLQEYEAGEIFFAEDAQQKTELWKMRRAV
                     AEMVKIAGYTIEEDTVVPRAELPALIKGVKALGKQHDFHAVCYGHAGDGNLHIRIKKE
                     GIPNSYGNEEMTGILREFFAFVKSLGGTISGEHGIGLIQKKYMNVVLGEPNLRLMREI
                     KKVFDPNNILNPGKIFDL"
     gene            2474..3571
                     /gene="mnmA"
                     /locus_tag="VEV83_05395"
     CDS             2474..3571
                     /gene="mnmA"
                     /locus_tag="VEV83_05395"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HYK44578.1"
                     /translation="MSKKGKVLVAMSGGIDSTVTALMLHHEGYEVVGITMKTWDYASS
                     GSTGKETGCCNLDSFNDARAAAVQNGFPHFILDIREEFGDFVIENFVEEYLAGRTPNP
                     CVMCNTHIKWRALLKRADALNCDYIATGHYANVHQHSNGRYFVSKGVDDLKDQSYVLW
                     GLQQDLLSRTILPLGKYRKPAIRQMAVDYGYPELAKKSESYEICFVPDNDYRRFLKHR
                     VEGLEEKVSGGWFVDKNGLRLGNHKGYPFYTIGQRKGLDIAFGRPVYVTAIDPQTNTI
                     VLGDEADLEQNNMLVSKINWMKYENVTDGMEVLTKIRYKDKGCLSNIYPDGENIRVRF
                     YEHVKSIAPGQSAVFYEGDDVIGGGIIQRHE"
     gene            complement(3669..>4132)
                     /locus_tag="VEV83_05400"
     CDS             complement(3669..>4132)
                     /locus_tag="VEV83_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HYK44579.1"
                     /translation="ALYCIRCGACLNACPVYKNIGGHSYDTAYSGPIGSVITPHLKNM
                     REYKHLSYASSLCGNCTEVCPVGINLHELLLENRYESVASGESSVSERIAWKMWKQAS
                     LSRRMMNTGNGKIKNKMVNRFFKDWTKHREELHFSEKTFNQMWKEGKGGRN"
BASE COUNT         1129 a          958 c          913 g         1132 t
ORIGIN      
        1 cagcgatgcg gctattattt tgcccggtgg ttatgggacc atggatgagt tgtttgaaat
       61 gataacctgg aatcaattga atattcacga caaaaagatc gtgcttctta attcagacgg
      121 atattatgat catttgatcg cgcacatcga caggatgcag gaacaaaatt ttttatatga
      181 agattctttg aaaagcttac ttataatacc cgactctcag gccttggctt ccttgatgga
      241 cgaagataaa aatcgtaccc tccccgaata acagggatgg ctccgccata cgcatcgcgg
      301 taaggtgaat aaggatcagt gagcaagtcg atgccaatga aggtgaaaaa accgccctgc
      361 ccaattgcac gctgtccata cccgattccg gccaataaac ttgtagcgcc aaccgtgtat
      421 ttagcagttt cgttggtcac gaggtctttt gttgtagaat tggtccagtt atgttctaac
      481 tggaactgag caaacaggaa agggagcggg aaaattcgca agaaaggacc gcccccataa
      541 ttgaaatttg atacgctaat atcgtggctg tacggatcac cgtaatattt ttgagacaaa
      601 taatttatgt tgaacaccaa cccggcgtcg agccattgtg cgagcgaata accgacttcc
      661 ggatttgcgc ctatcccaaa tgaaccggaa ccaaaaccca gcgaaatact tcccccaaga
      721 aaaacatttt cttttttgaa tccgccgttg ccctccccgt tatcccggtc ctgggcctgc
      781 aaaacttcaa ttgccgatac caggacaaaa agcaggagcc atttcttcat catgtcaaaa
      841 ttttttatgc aacgtcaaaa gtgcatcata aatttcagag gtcgaaaatt ttgccgggat
      901 ttaagatatt attggggtcg aagacttttt ttatttcgcg cattagccgc aggttaggtt
      961 caccgagaac gacgttcata tatttctttt ggatcaaacc aatgccgtgc tcgccgctga
     1021 tcgtcccacc aagacttttt acaaacgcaa agaactcgcg aagtattcca gtcatttctt
     1081 cgttaccata actatttgga atgccttctt tctttattct gatatgcaga ttcccatctc
     1141 ctgcatggcc gtaacataca gcatgaaaat catgctgctt gccaagtgct tttacgcctt
     1201 tgatcaacgc gggtaattcc gcgcgtggca ccaccgtatc ttcctcgatc gtgtaacccg
     1261 cgatcttaac catctctgcc accgccctgc gcatcttcca taactctgtt ttttgctgcg
     1321 catcttccgc gaaaaaaatt tctcctgcct cgtattcctg cagcagttga gctatcgctt
     1381 ccatttctgt catcagcaca tttagatcat tgccatcaac ttcaatgatc aggtgcgccg
     1441 ccacgtcgtc cgacactggc acgatatgac gatcgatcat tctgctcacg atctgcaatg
     1501 catcaatttc aactaactcc aaagcactcg gcgtgaatcc tgctttgaaa atggcgctca
     1561 ccacctcgct tgctttctcg agtgaggcaa acggtgccag catgagcaga tcatatttag
     1621 gaagcggaat aagccgtaaa acgatttttg tgacaatacc caaagtgcct tcactgccga
     1681 tcatcagttg agtgagatta taaccggtcg aattttttag gacattcgcc cccgtccaaa
     1741 tgatctcacc tgtcggcagc accacctgca ggttcaacac ataatctttc accacgccat
     1801 atttcacagc cttaggtccg ccgctgcctt cagcaatgtt gccaccaatt aaacacgagc
     1861 cgcggctcgc aggatcgggc ggataaaata gccctttctc cttaacagca ttttgcagca
     1921 cttccgttat aacgcctggc tctgtggtga cctgcaagtt gcgttcgtcg atgtcaatga
     1981 tcttgttcaa tctttctata gataaaacaa ttccgccggt gtgaggaatt gccccgccgc
     2041 tcaaaccggt gccagcgcca cgcggtgtta caggaatctt acgttcatta caatatgata
     2101 tgatagaact tatctcgtcg gcggtcgacg gcttcaccac aacctcggga aggtataata
     2161 gttcctcggt ttcatcatgg ccgtagtaat gccgcgcttc gtcgtctgcg aaaacgtgat
     2221 tgatcccgca gatcgtctgc agagcattta tcaattcgac attatctgtt tctttattca
     2281 ttagttaagc atgaacggca aaaataggta tgactaataa ataccaaacg tgattgagca
     2341 agtgcaaaaa acatttagtg cagatgatgt acccaacgtt cataaaaacg cggagcgcca
     2401 aagttgaaag tgaagtgccg tatatttgcc gtttttattt caaacaactc ccgcgagctg
     2461 gcggacacag ggtatgagca agaaaggaaa agtgttggtt gcgatgagtg gtggtatcga
     2521 cagtaccgtt actgcattaa tgcttcacca tgaaggttat gaagtggtgg ggattactat
     2581 gaagacgtgg gactatgcga gcagtggttc gacagggaaa gaaacgggct gttgcaatct
     2641 tgacagcttc aacgatgcgc gcgccgctgc cgttcaaaat gggtttccgc atttcatctt
     2701 agacatccgc gaagaattcg gcgatttcgt gatcgaaaat ttcgttgaag aatatctcgc
     2761 gggccgcacg cctaatccct gcgtgatgtg caatacgcac atcaaatggc gcgcgttgtt
     2821 aaaaagggct gatgcgttga actgcgatta tattgcaacc ggtcattacg ccaatgtaca
     2881 ccaacattcg aacggtagat attttgtaag caaaggagtg gacgatctaa aggatcagag
     2941 ttatgtttta tgggggttgc agcaagactt gctgagccgt acaattttgc cgctcggtaa
     3001 ataccggaag ccagccatca ggcaaatggc tgtcgattat ggctatcctg agctcgctaa
     3061 gaaaagcgag agctatgaga tatgtttcgt gccggataat gattaccgca gatttttgaa
     3121 acatcgtgtt gaaggattgg aagaaaaagt aagcggggga tggttcgtcg ataaaaacgg
     3181 attaagactt gggaatcata aagggtatcc gttttatacg atcggtcagc gcaaaggttt
     3241 ggatatcgct tttggaagac ctgtttatgt gactgctatc gatcctcaaa caaataccat
     3301 tgttctgggc gacgaagctg atcttgaaca aaacaatatg ttggtgtcaa agatcaattg
     3361 gatgaagtac gaaaacgtaa cggatggcat ggaagtattg acgaagatcc gttataagga
     3421 caaaggatgt ttaagtaata tttatcctga cggggaaaat ataagagtgc gtttttacga
     3481 acacgtaaaa agtattgctc ccggccaaag tgctgttttt tatgaaggtg atgatgtgat
     3541 cggtggtggg attattcaaa ggcatgagta atgagtgatc aatgatcagt gagatcaaat
     3601 cccaaatgcc aaattccaaa caaggtcata agtccaatat caaaatccta attcctaaat
     3661 cctaattcct aattcctacc tcccttcccc tctttccaca tttggttaaa cgttttttcg
     3721 ctgaagtgaa gttcttccct gtgttttgtc cagtctttga aaaacctgtt caccatttta
     3781 ttttttattt ttccgttgcc agtgttcatc atgcgccggc ttagactcgc ttgtttccac
     3841 attttccagg caatacgttc gctgacgctg ctttctcccg aggcaacgga ttcgtaacga
     3901 ttttccaaca atagctcgtg caggtttatt ccaacaggac aaacttcagt gcaattgccg
     3961 cacaaagatg aagcataact caggtgcttg tactctcgca tattcttcag atgcggggtg
     4021 atcacgctcc cgatcgggcc gctgtatgcc gtgtcataac tgtgaccacc gatgttttta
     4081 tacacagggc acgcattcaa acaagcacca cagcgaatgc aatacagtgc ct
//
LOCUS       DASQJI010000180         5387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1399276,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000180 DASQJI010000000
VERSION     DASQJI010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5387
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399276"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VEV83_05405"
     CDS             <1..936
                     /locus_tag="VEV83_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK44580.1"
                     /translation="LAEPRTNEYARADKAADWMVLAKLYLNAEVYTGTARYADCINYC
                     NKILGAGYTLDPEWKNLFLADNNTSNEIIFPVAFDAIHTQTYGGMVYLIHAEIGGTMN
                     AADFGVSSGGWAGLRTTKNLVDAFPDPSGTTDKRAMFYTDGQNLEIKIILNNFPDGYA
                     ITKYKNINQAGQAESDPTGQFVNTDFPMFRLADVYLMYAEAVLRGGGGDEGTAVGYIN
                     QLRERAYGNTSGNIAQSDLTLDFILQERSRELYWEATRRTDLIRFGKFTSSSYLWPFK
                     GGVLGGTGVADYRTIFPIPVSDITVNPNLKQNPGY"
     gene            954..1784
                     /locus_tag="VEV83_05410"
     CDS             954..1784
                     /locus_tag="VEV83_05410"
                     /inference="COORDINATES: protein motif:HMM:NF025650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusE domain-containing protein"
                     /protein_id="HYK44581.1"
                     /translation="MKTLLKLPALLLLTALIFGGCEKDETKLYFTGGTPPQLTAAAGA
                     DVNYLNADEVSLTLNWTNPDYTFTTGVSSMDVSYNIEIDTVGSNFTNPAKKVITVNKD
                     LTYSFKASDLNDIMLNQLSLDVASSHTLEIRVVSSLTNNSAQLISNSVQYTATPYVIP
                     PKVEPFTYDLFITGSATDGGWMVGGGVGVPANQEFTEIDSLHYTITVHLIGGQEYLFL
                     PVNGDWGHKYACKDKSVQPLTGGDFGRDLSDNFPGPAADGIYKIDVDFQKGKYTVTKQ
                     "
     gene            1803..3191
                     /locus_tag="VEV83_05415"
     CDS             1803..3191
                     /locus_tag="VEV83_05415"
                     /inference="COORDINATES: protein motif:HMM:NF025650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusE domain-containing protein"
                     /protein_id="HYK44582.1"
                     /translation="MKNILKALLIIVGSVSMFAACEKTEVLPHYDTGTAPVLSSDVNS
                     IAPAPSDSDNTVLTLSWTDPGYATNASTVKYVVQIDTAGGDFADAATRMVTGELSTSF
                     IAKDLNAILLGFGFEFGIQYSIDVRIVSSYANNNDQKISNVLSLQVTPYVVPAKVLPP
                     QSGTLFLVGSATAGGWGNPVPVPAQQFTRIDSLDYEGTFYLKGGQEYLMLPVNGDWSH
                     KYAVADKSVAGLSGGGDFGYDLSDNIPGPAATGMYKISVDFQHGTFVVTPVNLFDFLW
                     VPGDYQGWDPATAATLASPNKDGTYEGYVNIPAGGTYEFKLTNEPDWAGTVYGDGGAG
                     TISTSGGNLKFPGPGYYKVNVNTNDNTYALTATSWGLIGSFAGSGWSTDADMTYDAGN
                     NLWHGTITLADGDEFKFRSNHDWGLNYGDKGADGSLEENGDNLKGYSAGTYDISLYLG
                     NSGFYTYKIIKQ"
     gene            complement(3266..4318)
                     /locus_tag="VEV83_05420"
     CDS             complement(3266..4318)
                     /locus_tag="VEV83_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44583.1"
                     /translation="MIKAKNVSPDKLSAFTAVCLSIPIAIGFYLLSYKWSDFLIALGL
                     VFFASFFMIRFVLNEFIYRKIKVIYKFIYQTKASKKEEMYYKYILPNKSIEEVNEDVE
                     NWAEQKKQEIEYLRHNESYRKEFLQNLSHEIKTPIFAIQGYVDTLLNGAMDNPEISRK
                     FLENTSRNVGRMVDLVNDLDEITRLESGEQPMHKENFVVQDLTREVYETLAPKAIEKN
                     ISCSIKKGCEQPIEVLADREKITRVLINLVENSIKYGQPGGYVVAGIYKTDDKHVLVE
                     VSDNGIGIAEEHLPRIFERFYRTDKGRSRNVGGTGLGLAICKHIIEAHGQSIHVRSKT
                     DVGTTIGFTLGTVKDQ"
     gene            complement(4402..5091)
                     /locus_tag="VEV83_05425"
     CDS             complement(4402..5091)
                     /locus_tag="VEV83_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44584.1"
                     /translation="MELKAKTILVADDENDIVEIVSYNLLKEGYDVYTARDGNEALEK
                     ARVIEPDLLILDILMPYKSGVEVCRILRSQAKFKNSLIVLLTALGDEGSHIKGLDSGA
                     DDYITKPISTKVLMSRVNALFRRVQKEENDVLTVGDIIIDASKYSVQVNSVGISLAKK
                     EFELLHLLATKPGRVFLRNEILEQVWGNEVIVGDRTIDVHIRKIRQKLGVNCITTVKG
                     VGYKFDYSSSL"
BASE COUNT         1470 a         1216 c         1183 g         1518 t
ORIGIN      
        1 cttgctgaac caagaacaaa tgaatatgcg cgggccgata aggcggcgga ctggatggtg
       61 ttggcgaaat tgtatttaaa tgccgaagtt tatacgggaa cagcccgtta tgcagactgt
      121 attaactatt gcaataaaat actcggcgcg ggatacactt tggaccctga gtggaaaaat
      181 ctttttcttg ccgacaataa cacttcgaac gaaattatct tcccggtcgc cttcgatgct
      241 attcatactc aaacttatgg cggtatggtt tatttgatac atgcagaaat aggaggtact
      301 atgaacgctg ccgatttcgg cgttagctca ggcggatggg ccggtttgag aacaacgaag
      361 aatttggttg acgcgtttcc tgatccctcc ggaactacag ataaaagagc gatgttttat
      421 acagatggac aaaacttaga aataaaaata atcctcaata atttccctga cgggtatgct
      481 attaccaaat acaaaaatat caaccaggca ggccaggcag aatctgatcc taccgggcaa
      541 tttgtaaata ctgattttcc gatgtttcgc ttagctgatg tgtacctgat gtatgctgaa
      601 gcagtattga gaggtggagg aggtgatgaa ggcacagctg tgggttatat aaatcagtta
      661 agggagcggg catatggaaa tacttcaggc aatattgctc aaagcgacct gacccttgat
      721 tttattttac aggaaagatc gagggagttg tattgggaag cgaccaggcg cactgacctg
      781 atacgattcg ggaaatttac tagcagctct tatttgtggc cattcaaagg tggcgtactg
      841 ggcggaacag gggttgctga ttatcgtact atttttccga ttccggtcag cgatataaca
      901 gtcaatccta atcttaaaca aaatcccggc tattaattta aaattaagtg agaatgaaaa
      961 cattattaaa actaccagct ctattgctgt taacagcttt gatttttggc ggatgtgaaa
     1021 aagatgaaac caaattatat ttcaccggag gcacccctcc gcagttaacg gcggctgcag
     1081 gggcagatgt aaattacttg aatgctgacg aagtttctct cacccttaat tggacgaacc
     1141 cggattatac tttcaccacc ggtgttagct ccatggacgt gagttataat atagaaatag
     1201 acactgttgg ttccaatttt accaacccgg caaaaaaggt aatcacggtg aataaggatc
     1261 tgacctattc attcaaggct tccgatctaa atgatataat gcttaatcaa ttaagtttag
     1321 acgtcgcttc ctcccataca ttagagattc gtgtggtttc cagtctcact aacaattctg
     1381 ctcagctaat atctaactca gttcaataca cggctacccc ctatgtaatt ccgccaaaag
     1441 tggagccatt cacttacgat ttatttataa ccggaagcgc aacagacggc ggttggatgg
     1501 ttggtggtgg tgtgggtgtg ccagcgaacc aggagtttac tgaaattgat agtttacatt
     1561 acacaataac agtacacttg attggaggac aggagtattt attcctgccc gttaacggag
     1621 actggggaca taaatatgct tgtaaagaca aaagtgttca acctttgaca ggcggcgatt
     1681 tcggacgcga tctgagcgat aattttccag ggcccgcagc tgacggtatc tacaaaattg
     1741 acgtcgattt ccagaaagga aaatatactg taaccaaaca ataactctaa tacaatcttt
     1801 atatgaaaaa tattttaaag gctcttttga tcatcgttgg ttcagtatcc atgttcgccg
     1861 cctgcgaaaa aacagaagtg ctcccgcatt atgatacggg cactgcccct gtattaagca
     1921 gcgatgtgaa ttcaattgcg ccggctccat ccgattccga taacactgtt ctcacactgt
     1981 catggacgga ccctggttac gcgacaaatg catccaccgt gaagtacgtg gtacagatag
     2041 acacagccgg tggagatttt gctgatgccg ccacccggat ggtgaccggc gaactgtcta
     2101 cttcgttcat tgcaaaggac ctaaatgcta ttctcctcgg ttttggtttt gaattcggta
     2161 ttcaatacag cattgatgta aggattgtat cgtcttatgc gaacaacaac gatcagaaaa
     2221 tatccaatgt gctctctttg caggtaaccc cgtacgttgt acccgcaaaa gttttaccgc
     2281 cgcaatcagg cactttgttc cttgtgggta gtgcaactgc aggaggttgg gggaatcctg
     2341 tacctgtgcc tgctcaacag ttcacaagaa tagattcgct cgattatgaa ggcacttttt
     2401 atttaaaggg tggccaggag tatttgatgc tcccggtgaa cggggactgg agccacaaat
     2461 atgctgtcgc cgacaaaagt gtggctggcc taagtggcgg aggtgatttc ggctatgatc
     2521 taagcgataa tatccccggc cccgccgcaa caggcatgta taaaatttca gtggatttcc
     2581 aacacgggac tttcgtagtt actcctgtca atttattcga ttttttgtgg gttccgggtg
     2641 attaccaggg atgggatccg gccactgctg caacgttggc ttctccaaac aaggacggta
     2701 cttacgaggg ctatgtaaac ataccagccg gcggcactta cgagtttaaa ttgaccaatg
     2761 agccggattg ggccggcact gtgtatggcg acggcggtgc tggcacaata agcacaagtg
     2821 gtggaaatct caaatttccg ggtccgggct attataaagt gaacgtgaac acaaacgaca
     2881 acacatacgc attaaccgca actagctggg gactgattgg aagctttgcg ggaagtggct
     2941 ggagcaccga tgctgatatg acctatgatg ccggcaacaa cctttggcat ggaacaataa
     3001 cgctggcaga cggggatgag ttcaaattca ggtcaaacca tgactggggc ctaaattacg
     3061 gcgataaggg cgccgatgga agcctcgaag aaaatggcga caacctcaaa ggatattcgg
     3121 cgggcacata cgatatttct ctctatcttg ggaactctgg cttttatacc tataagatta
     3181 taaaacaata ataactcgtt ttactacttg ctaacaacgg ccgcccactg ggtggccgtt
     3241 ttcgttgctg agatatgatg ccgaactact gatctttaac tgtgcctaat gtaaacccga
     3301 tggttgtgcc cacatcggtc ttgctgcgta cgtgaatgct ttgcccatgt gcttcaataa
     3361 tgtgcttgca gatcgcaagg cccaaccctg ttcctccgac gttacggctc cggcctttat
     3421 cggttcgata aaaacgctca aatattctcg gcaggtgttc ctccgcaatg ccaataccat
     3481 tgtctgaaac ctcgaccagc acgtgcttgt catcagtctt atagattccg gccacaacat
     3541 aaccgcccgg ctgtccatat ttgatggagt tctctaccag gttaattaaa acacgcgtga
     3601 tcttttccct gtcagcgagc acttctatcg gttgttcaca acctttcttt atactgcagc
     3661 ttatattttt ttcgattgcc tttggcgcca gtgtttcata aacctccctc gtgagatcct
     3721 gcactacgaa attctctttg tgcatcggct gctcaccgct ttcaagacgc gttatttcgt
     3781 cgaggtcgtt aacaaggtca accatgcggc ctacattgcg cgatgtgttt tcgagaaatt
     3841 ttcgggagat ctccggatta tccatcgcgc cattcagaag agtatccaca taaccttgta
     3901 tcgcgaagat gggtgtcttt atttcgtgcg ataaattttg caaaaactct ttccggtagc
     3961 tctcgttgtg gcgcaggtat tcgatctcct gtttcttttg ctctgcccaa ttctccacat
     4021 cctcattcac ctcttcaatg ctcttgttcg gaagaatgta tttgtagtac atctcttctt
     4081 tcttgctcgc tttggtttga taaatgaatt tatagatcac ttttattttc cggtagataa
     4141 actcattcag aacaaaacgg atcataaaaa acgaggcgaa aaaaaccaga ccgagagcaa
     4201 tgaggaaatc actccattta taactgagca aataaaagcc gatagctatt ggaatagata
     4261 aacaaacggc tgtaaatgcc gagagcttgt cgggagacac gtttttcgcc ttgatcatgg
     4321 aatcttctta tttggcaaat ttagcgcgga gacggagtaa caagcaaggg tttacgtttg
     4381 cagaaaattt cgacatcaaa attagaggga actggagtaa tcaaatttat accctacgcc
     4441 tttgacggtt gtaatacaat taacgccaag cttctgccgg atctttctga tgtgcacatc
     4501 gatcgttcga tcgcctacga tcacttcatt accccacact tgttccagta tctcattccg
     4561 cagaaatacc ctgcctggtt tagtagcgag caaatgaagt aattcgaatt ctttttttgc
     4621 gagcgagatg ccaacactgt tcacctgcac cgagtacttc gacgcgtcta tgatgatatc
     4681 gcccactgtg agcacatcgt tctcttcttt ctgcacccgc cggaacaacg cattcaccct
     4741 gctcattaaa acttttgtgc tgatgggttt tgtaatgtaa tcgtcggcac ccgagtcaag
     4801 cccttttata tgagatcctt catcgcccaa agctgtcagc agtacgatca aactgttttt
     4861 gaacttagcc tgtgatcgca gtatgcggca cacctcaacg ccacttttgt agggcattaa
     4921 tatatcaagg atgagcaggt cgggctctat cacccttgct ttctcaagag cttcattgcc
     4981 atcccgcgcc gtatatacgt catatccttc cttcaacaag ttgtaagaaa cgatctctac
     5041 aatatcattc tcgtcgtcag ctacaaggat agttttcgct ttgagctcca ttaacacaaa
     5101 gtttacacaa aaataatttt cacaactaca tactcacata tccacatatt atgttattgt
     5161 taaggcatcc ggcacgatat tgttataact ttgaattcat tcaaacgcat gtctgagtca
     5221 ccgtcaattc cgtcctgcta aatgaaaaac cgcggagatg agaataaaat ctaacagatg
     5281 aaaaaatttt tcctctttat tttttctttt tgttctgctg ccttgttaac ccgggcccaa
     5341 aactcagcga aacaggaaat tccccttgtt cgtgtgtatt tccatga
//
LOCUS       DASQJI010000181         5000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_938180,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000181 DASQJI010000000
VERSION     DASQJI010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5000
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938180"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..309)
                     /locus_tag="VEV83_05430"
     CDS             complement(187..309)
                     /locus_tag="VEV83_05430"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK44585.1"
                     /translation="MIKLIHAAVERGVTFFDTAEVYGPLVNEQLVSDPAKRLTL"
     gene            complement(459..1478)
                     /locus_tag="VEV83_05435"
     CDS             complement(459..1478)
                     /locus_tag="VEV83_05435"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HYK44586.1"
                     /translation="MASRVRYIGLPRNFPHWKSAEFEGPGREPGTNYGAGARPPVYIK
                     TIEKIAENMKHLLITFAMISFSASHSMAQEPIDQFTKKDTMNRIERSKETYEKLFKQI
                     QSVSGSDDPELMTILQRFIFGEIFYIGNLSDTTRELITITALATNQTLPQLRAHTNTA
                     LNIGVKPIEIREVIYQLAPFIGYPKVLNALETINTVFKDRKIKLPLQNEATITDNERF
                     DKGKEIQSPIYGEGMKQNMTDLPGEFADAIPRILTESCFGDFYTRSGLDLKTRELMIF
                     CALVTLGGADRQLGSHAVGNMKVGNDKETLLSALVQLYPYIGFPRIANAIYAIKDAKV
                     EADVH"
     gene            complement(1606..3333)
                     /locus_tag="VEV83_05440"
     CDS             complement(1606..3333)
                     /locus_tag="VEV83_05440"
                     /inference="COORDINATES: protein motif:HMM:NF013469.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5597 domain-containing protein"
                     /protein_id="HYK44587.1"
                     /translation="MKKLSFLFFLFVSCGALGQTSSLPHLEKTDHITQLIVKGKPFLI
                     LGGELHNSSTSGAAYMRPIWEQMKKKNLNTVIAPVYWELIEPQEGKFDFSLVDSMIYG
                     ARKQDLHLVILWFGSWKNGYSMYVPAWVKNDTKRFPRVKNKKGESFVVLSALSEVSMH
                     ADAKAFKMLMQHIRQVDEKYQTVIAAQIENEVGLFYEPRDYSEEAVKAYEQGVPSDLM
                     NYLAVNKAKLQPELDSAWKANGYKTSGSWEDVFGKSILDKENWKALSYLPEELFTVYH
                     YSKYIGQVAAAGKEAYPIPMYVNAWIKQPGFGSPAKYPSGGPVPHTLDIWRANATAID
                     FIAPDIYVSIPEARYTIEQYHRSGNPLFIPEFKPGAASASLAFWAYGQHDAISFSPFG
                     IDESTPDEDPITKSYAALSQVQQLILQQNGKGTMAGIYLDTTEKSQTFELNGYNIKAN
                     LAVPMFAPAGGAVAGLSSSDKRVISAGGIIFSTGPDEFIVVGKDFSATFTPVKTDAQK
                     PKIDIEYTDEGTFLNGKWITLRRLNGDEGTGGGDYGFGFNKGYSALLRFPLSSTGDYN
                     IVKFKMYRY"
     gene            complement(3719..4075)
                     /locus_tag="VEV83_05445"
     CDS             complement(3719..4075)
                     /locus_tag="VEV83_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK44588.1"
                     /translation="MTVKPIKTKKDYQQALERLETVFDAKKGSAKGDKLEVLSILIEK
                     YENEHFPIGLPDPIEAIKFRMEQLGYNQADLAKVVGLKSRASEILNKKRKLSLDMIRQ
                     LHDKLKIPTEVLIQAY"
     gene            complement(4072..4371)
                     /locus_tag="VEV83_05450"
     CDS             complement(4072..4371)
                     /locus_tag="VEV83_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HYK44589.1"
                     /translation="MRVIAKKILREFWEKYPDCKQQLKAWFQETGKAEWRNPKDIKKE
                     YPSASILLDNRVVFNIKGNHYRLVVKINYDYQMVWIKFIGTHADYDKIDATKIKR"
     gene            4672..>5000
                     /locus_tag="VEV83_05455"
     CDS             4672..>5000
                     /locus_tag="VEV83_05455"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HYK44590.1"
                     /translation="MYERYFEHFTEKVPLTEDEMNFIKNYLTVKKIRKRQYLLQEGDV
                     CKCVAFVEKGAMRLYRVNEDGSEHIVAFALDGFFITDLYSFLTQETSTYNIDAIEDSE
                     LVLITRSA"
BASE COUNT         1376 a         1039 c          955 g         1630 t
ORIGIN      
        1 aaaactaata gagtcaggcg tcgtaaaacc tgttatggat cgagtgtttc catttgaaca
       61 aacgaatgaa gccatggcgt acgtagaaac gggtagggca aaaggaaagg ttgttgttaa
      121 ggtgaattag tttgcagaaa cgaggctctc ttgaacgttg gctattgtgc ctgtactttc
      181 cgcgccttac agtgtgagcc tttttgcagg gtcgcttacc aattgttcat ttactaaagg
      241 accatatact tctgcggtat caaaaaatgt tacgccacgt tcaaccgcgg catgaataag
      301 tttaatcatt tcatccttgc ccttttgttt cgcgataaga ccaactcata catacagcca
      361 agaccaagtg cagacacttc aagtccgctg ttacccaatt ttcttttttg tagtgttttc
      421 atttttaaaa aatttcttta atgagattct atgtttgatt aatgcacgtc cgcttcaact
      481 tttgcatctt tgattgcgta aatggcatta gctattcttg gaaacccgat atagggatac
      541 aattgaacca atgcagaaag aagcgtttct ttatcgttgc caactttcat atttccaact
      601 gcatgtgagc ccagttgtct atccgctcct cctaatgtaa cgagggcaca gaatatcatg
      661 agctctcttg tttttagatc gagaccgctc ctggtataaa aatcgccaaa gcatgattcg
      721 gttaatattc tcggaatggc gtccgcaaac tcgcccggca aatctgtcat gttttgtttc
      781 atgccttcac cgtaaatcgg agattgtatt tctttccctt tatcaaatct ttcattatct
      841 gttatcgttg cttcattctg tagaggcagt ttaatttttc tgtctttgaa aacggtgttt
      901 atagtttcta aagcattcaa cactttggga taaccaatga atggtgctaa ttgatagatc
      961 acttccctga tctcaattgg ctttacacca atatttaaag cggtatttgt atgtgctctt
     1021 aattgtggca gcgtttgatt cgtggcaagc gccgtgattg taattagttc acgggtagtg
     1081 tcgcttaaat ttccgatgta aaaaatttct ccaaaaataa aacgctgcag aatggtcatc
     1141 agttcaggat catcggaacc cgacacagac tgaatttgct tgaaaagctt ttcatacgtt
     1201 tctttcgatc tttctattct gttcatggtg tcttttttag taaactggtc aattggctct
     1261 tgtgccattg aatgtgatgc cgaaaaacta atcattgcaa atgttatgag gagatgtttc
     1321 atattttcag ctattttttc aattgtttta atgtaaacgg gtggccgggc gccagcacca
     1381 taattggttc cgggttcacg acccggtcct tcaaattctg cggatttcca atgcggaaaa
     1441 tttcgcggaa gccctatgta ccggacacgg gatgccatat cagcattttc gtttgctcag
     1501 caaaccccat attgtgcgtt cgtacaataa attttgtttg atttcctcat aaacagatca
     1561 taagaattgc gttttcagaa gaacttttga agccggtgtg cttcactaat acctatacat
     1621 tttaaacttt acaatattgt aatcaccggt agacgatagt ggaaatctca ataaagcaga
     1681 gtaaccttta ttaaatccaa atccgtaatc accgccaccc gttccttcat caccattcaa
     1741 ccttcttagg gttatccatt taccgtttag aaacgttcct tcatccgtat actctatgtc
     1801 tattttaggt ttttgggcat cagtttttac gggtgtaaat gttgccgaga agtctttgcc
     1861 aacaacaata aattcgtctg gcccggtaga gaaaataatt ccaccggcag aaataactct
     1921 tttgtctgac gatgagagac cagcaactgc gccgcccgca ggtgcaaaca tgggtactgc
     1981 aagatttgct tttatattat agccgttgag ttcaaaggtt tgagactttt ctgttgtatc
     2041 aaggtatata ccagccatcg tcccctttcc attctgttgt aaaatcaatt gctggacttg
     2101 cgataatgcc gcatagcttt ttgtgatcgg gtcttcatca ggagtacttt catcaatacc
     2161 aaatggagaa aaactgatcg catcatgctg gccatatgcc cagaaagcta agcttgcaga
     2221 tgcagcgccg ggtttaaatt caggaataaa taaaggattg ccagaacgat gatactgctc
     2281 aatggtatac cgggcttccg gtatagacac ataaatatcc ggtgcaatga aatctattgc
     2341 cgttgcatta gctctccaaa tgtccagcgt atgtggaaca gggcctccgc ttggatattt
     2401 tgcaggcgac ccaaaaccag gttgctttat ccacgcgttt acgtacatag ggatagggta
     2461 tgcttcttta ccggctgcag ctacctgccc aatgtatttg gaatagtgat aaaccgtgaa
     2521 cagttcttca ggtaagtaag aaagtgcttt ccaattctct ttatccaaaa tactttttcc
     2581 aaatacatct tcccagcttc ctgaagtttt gtaaccattc gctttccagg cactatctaa
     2641 ttccggttgc agttttgctt tattaacagc taaataattc atcaggtcag aaggaactcc
     2701 ctgttcgtat gccttaactg cttcctcgct ataatcacga ggttcgtaaa acaaacccac
     2761 ttcattctct atttgtgcag caataacagt ttgatatttt tcatctacct ggcgaatgtg
     2821 ttgcataagc attttgaaag cctttgcatc ggcgtgcata gaaacttcgc taagggcaga
     2881 aagcacaaca aatgattcac cctttttatt cttcactctt ggaaatcttt ttgtatcatt
     2941 tttcacccaa gccggaacat acatagagta cccattcttc catgaaccaa accacaagat
     3001 gaccaaatgc agatcttgtt tcctggcacc atagatcata ctatccacta aagaaaaatc
     3061 aaactttcct tcttgtggct ctatcaattc ccaatacaca ggtgcaataa ccgtgttgag
     3121 attttttttc ttcatctgct cccatatcgg ccgcatgtaa gcagcaccgg aagtgcttga
     3181 attatgcaat tctccaccca agatcaggaa aggttttccc tttacaatca gttgagtgat
     3241 atggtccgtt ttttcaaggt gcggtaaaga ggatgtttgt cccagtgcac cacaagagac
     3301 aaaaagaaaa aataagaagg acaatttttt cattaatgag cttgtttaag aaggtaaaat
     3361 tagtcgcaca cccagatata tcgagaatta ttttgaccac aaatagcatg aaaaattgag
     3421 aaatttaacc ccatattcat tgctcttttt cgcaaagctt ctccgttagt tcgggttgtt
     3481 caaagatgtg taggatgttt attaaaaata ggaagcaacg aaaaagtatt tgcgatggca
     3541 ggatatcatt gaacgtccag cccgaacaac tgctctatcg gaatattttg ctgaagataa
     3601 aatttgtagc taattattaa cgtcaagccc gaactagagc cgagtagcta tttgctgccg
     3661 attgttcttc cgtcggcctg ctattgcaaa tactcatgtt gggcgttcgt gcctcttgtc
     3721 agtaagcttg tatcaatact tcggttggga ttttcaactt atcatgcagt tgacgtatca
     3781 tgtcaagtga cagttttctc tttttattca aaatttcgct ggccctgctt tttagcccga
     3841 cgacctttgc caagtccgcc tgattataac ccaattgctc catcctgaat tttatagcct
     3901 caatagggtc aggaagtccg attggaaaat gttcgttttc atatttctcg attagtatgc
     3961 tcaatacttc tagcttgtct ccttttgccg aacctttttt tgcatcaaaa acggtttcga
     4021 gcctttctaa ggcttgttgg taatctttct ttgtttttat tggttttact gtcatctttt
     4081 aatttttgtt gcatcgattt tgtcataatc ggcgtgcgta cctatgaact taatccatac
     4141 catttgataa tcatagttaa ttttaacaac aagccggtaa tgatttccct taatattaaa
     4201 aacgactcta ttgtcgagga ggatgcttgc gcttggatac tcttttttaa tgtctttggg
     4261 gttcctccat tccgctttac ccgtttcctg aaaccaggct tttaattgct gtttacaatc
     4321 tggatacttt tcccaaaatt cacgaagtat cttttttgca attaccctca acctttcagt
     4381 ttctcaaagt taaagaagtt cccgaaatgg gatattttat ttttggatgt ataacttttt
     4441 ggtgcatgac gtccattcct gcattgccga accgttgttt ttgaaaagcg cggcaataca
     4501 ggtaatatag gctggtttta cgatatgata tttcgaaaat tgaagccacg cgtctttact
     4561 tcttcaacac caaagcatga aggaaaagac gcgatcaact tcatgattaa aatcagcaag
     4621 ctcaattttt aatttggtta tattgcacta acattcattt ggcgctgctt tatgtacgaa
     4681 cgctacttcg aacattttac ggaaaaggtg ccgcttacgg aagatgaaat gaattttatc
     4741 aaaaattatc ttaccgtaaa aaaaattcga aaaagacagt atttactgca ggagggtgac
     4801 gtatgtaaat gcgtggcttt tgtggaaaaa ggagcaatgc gtttgtaccg tgtgaatgag
     4861 gacggctcag agcatatagt ggcatttgcg ctggatggat tcttcatcac cgatctgtac
     4921 agctttctga cacaggaaac ttccacgtat aatattgatg caattgaaga ttcagaactc
     4981 gttcttatca caagatctgc
//
LOCUS       DASQJI010000182         6969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_477388,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000182 DASQJI010000000
VERSION     DASQJI010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6969
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477388"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..1642)
                     /locus_tag="VEV83_05460"
     CDS             complement(71..1642)
                     /locus_tag="VEV83_05460"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK44591.1"
                     /translation="MHLCFSAVSQTNIYWQQQVNYKIAVALNDVNKTLSGFERLEYFN
                     NSPDTLHYIWFHIWPNAYKDETSAFYQQLGHLSEGKEIIQKFKERGYIDSLSFKADGE
                     TIRYENHPQYNDVIKLLLNKPLYPGQHLVLTTPFFVKIPSYISRLGHDGNSFMITQWY
                     PKPAVYDRKGWHEMPYLDIGEFYSEYGTFDVNITVPSAYVVAATGLLETDKERNLYQS
                     IGKKNKDIIASNNGSRQKIKFNYYQDETGGVKTLSWHADSVHDFAWFADKEFVINYDT
                     LQLASGKVIDAYTFYHSTDKQWYNSEDDVEDVIRHYSAWLGEYAYPAANAVAGPVNGL
                     SGGMEYPMITLITDPKADEVKLDGLLAHEVGHNWFYAMLGTNERDHPWMDEGINTFYQ
                     FKYEGQKHRSNLVFGNSIPQSAKTLNEAAFFSAIYNSMNMIPMQEPVETPSDSFKDDQ
                     EYSKIVYLKTAIWMYTVELSLGTDKLQQAMQSYFSEWKFRHPYPEDMKASLEKSLNMG
                     VDDLFALLQHEGNFK"
     gene            complement(1678..3102)
                     /locus_tag="VEV83_05465"
     CDS             complement(1678..3102)
                     /locus_tag="VEV83_05465"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HYK44592.1"
                     /translation="MQQFKTIKTGWYVLSDVVASAITWILVSHQRKILLNEEPLTYSG
                     LFTADPFFYKSFLLALIFWTALFAVAGSYNDSLYKKSRLKELTSTFNQCLIGSVILLF
                     ILFLNDNEPHYSYFYNAFFMLIILQLVFTSVGRLLLISIAKKKIRRHNYLFNSIIIGN
                     NQKSVAVYNELRRNLSLPGYHVLGFLSNEKNIKNGVSRNLPFLGTVDNVEEVIRKNNI
                     DQVVVALEKSEQALTEKLISKLSGEDVEIKLVPDTLEILAGSVKIKDVPGAVWMDIDT
                     AVMPAWQSNVKRLFDVAGSLVSIIILSPLMLFVSVRTKLSSEGPVMFAQERIGYKGKR
                     FNIHKFRSMYADAEKNGPALSSENDPRITSWGRVMRKWRLDELPQLWNILKGEMSFVG
                     PRPERKFYIDQINERTPYFRYLLKVKPGLTSWGMVQFGYASTVEEMIARMKYDLVYIE
                     SSSLLLDFKIMLYTLKTIFLGKGK"
     gene            complement(3113..4087)
                     /locus_tag="VEV83_05470"
     CDS             complement(3113..4087)
                     /locus_tag="VEV83_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK44593.1"
                     /translation="MLKVGVFGVGHLGKFHLNNWKEIKNAQLVGFFDPADETAGEVEK
                     KYKLKRFKEASALMDVVEAVDVVAPTPYHFELCEQAVRKGKHVFVEKPMADTLEEGKH
                     LVEMVQEAGVKFQVGHVERFNPAFLAIKDISLNPMFIEVHRLAQFNPRGTEVSVILDL
                     MIHDIDIILKLVKSDVKHISASGVAVMTDTPDIANVRIEFNNGCVANLTSSRISMKKM
                     RKMRLFQKDAYIGIDFLEKKTEIIKLKTEGDEDAFSFDIETPSGSKTISIINPPIEAV
                     NAIHEELQAFVHAIETNAPPPVNEIDGYLAMETAHRILEKISNTAILA"
     gene            4280..5968
                     /locus_tag="VEV83_05475"
     CDS             4280..5968
                     /locus_tag="VEV83_05475"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HYK44594.1"
                     /translation="MHLLRVLSVPAFIVFTYTASAQINTKTWYLQDPSTDSVDGISLA
                     KTYQFLKGKKSTPVIVAVIDSGVDTTHEDLKKILWTNKNEIPGNGIDDDHNGYVDDVH
                     GWNFLGNKNGQNINKASDEKSRVYYKYKERYEGKTINEDSLSEDERWIYEEWTRASAD
                     MTISSDEQMEVLMLEALDKTLRKQDAILQQELGKSEYSLNDLELTQNLSVKGKQAKTS
                     FLNILKMEQVEPETTNKAVLQDLEEYLDEKRRLLENKTAAPPDYRAEIIKDNYDDIND
                     KFYGNNDIMGPDAEHGTHVSGTIAAVRDNNIGVQGIADNAQIMMIRAVPDGDEYDKDI
                     ALAIKYAVDNGAKVVNMSFGKSYSPQKKWVDEAVKYAEDHDVLLVHAAGNESNNVDSV
                     QNFPNRELVFEKTTAPNFINVGAYGDPHINDGKFIAYFSNYGKNSVDVFAPGVKIYST
                     IPHSYGFHDGTSMASPVVTGIAALIRSYYPQLSAEQVKYAIEKSVKQYTDLVNKPGEY
                     NSTEQISINELSKTGGFVNADAAVELAATLKPEAPQKIQDKKKASFQNNIQTNQ"
     gene            5968..6480
                     /locus_tag="VEV83_05480"
     CDS             5968..6480
                     /locus_tag="VEV83_05480"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK44595.1"
                     /translation="MARPQAHECAPYYQKYIALAKGDSVNEIVKNHAFELQEFYNSLP
                     DAKADFTYADGKWTLKQVLQHVTDAERVFAYRALRIARNDTTPLASFDENVYVENGFA
                     NERALSSLKQEFNSVRAATDVFLLGLNEEQINRLGTASNNPVSVNALAFIIYGHLLHH
                     QNIFRERYGL"
     gene            6742..>6969
                     /locus_tag="VEV83_05485"
     CDS             6742..>6969
                     /locus_tag="VEV83_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44596.1"
                     /translation="MKCAIAILLWPLIFTFFSCRKQFSEQTFSSRSNNHFLSSTPNII
                     VILGDDVGYEIPTYTGGQSYSTTNIDYLAANG"
BASE COUNT         2038 a         1519 c         1463 g         1949 t
ORIGIN      
        1 gcgtgtgaaa gaaaaaaagt aaggataaaa aaaattaaat gcagtagttt tttcatcttc
       61 tgcataattg ctatttaaag ttcccttcat gctgcagcag cgcgaacaaa tcgtcaacgc
      121 ccatgtttaa acttttttcc aaagacgctt tcatgtcttc cgggtatgga tgcctgaatt
      181 tccattcaga aaaataggac tgcattgcct gttgcagctt atcagtccct aatgagagct
      241 ctacggtata catccagatg gcggtcttca ggtaaacgat cttcgaatat tcctggtcgt
      301 ctttgaacga gtccgatggc gtttccacag gctcctgcat gggaatcatg ttcatcgaat
      361 tataaatagc gctaaaaaaa gctgcctcgt tgagtgtttt ggcgctttga ggaattgaat
      421 taccgaatac aagattcgaa cgatgtttct gcccttcata cttaaattga tagaaagtgt
      481 tgatgccctc gtccatccag ggatgatcgc gctcgtttgt tcccagcatc gcgtaaaacc
      541 aattatgccc cacttcatgg gcaagcaggc catcaagttt tacttcatct gcctttggat
      601 cggtaataag cgtgatcatt gggtattcca tcccaccaga caatccgtta actggtccgg
      661 ctactgcatt tgccgccggg tacgcatatt ctcctaacca ggcagagtaa tgccggatca
      721 catcttcaac atcgtcttcg ctgttatacc attgcttgtc tgttgaatga tagaaagtat
      781 aagcatcgat cactttacct gatgcgagtt gaagggtgtc gtaattgatc acgaattctt
      841 tgtcggcaaa ccaagcgaaa tcatgaacgc tatccgcatg ccacgaaagc gtttttacac
      901 ctccagtttc atcctgataa tagttgaatt ttattttttg cctgctacca ttatttgacg
      961 ctatgatgtc tttattcttt ttcccgatcg attgatacag gttcctctct ttgtccgttt
     1021 ctaacaaacc tgttgctgca acaacatatg cagaagggac agttatgttg acgtcaaagg
     1081 ttccatactc actgtaaaat tcaccaatgt ccaggtaggg catttcgtgc cagccctttc
     1141 ggtcatacac tgcaggcttg gggtaccatt gcgtgatcat aaaagagttt ccatcatggc
     1201 caagcctcga aatatacgag ggaattttta cgaagaatgg agttgtaagg accaagtgct
     1261 gcccgggata cagcggtttg tttaacaaca attttataac atcattatat tgagggtgat
     1321 tttcgtaacg aatagtttcg ccatccgctt taaaagaaag actgtcgatg tagccacgct
     1381 ctttaaattt ttgaatgatc tcttttcctt cgctcaaatg acctaactgc tggtaaaaag
     1441 cagaagtttc atctttatat gcgttaggcc agatatgaaa ccagatataa tgcagagtat
     1501 ccggtgagtt gttgaagtac tcaagcctct caaaaccgct gagtgtttta ttcacatcgt
     1561 tcagcgcaac agcgatcttg tagtttactt gttgttgcca gtaaatgttc gtttgagaga
     1621 cggcagaaaa acataggtgc acgctcagaa gagcgcaggt tattcttttt attgaactca
     1681 ttttcctttc cccaaaaaaa ttgtttttag tgtatataac atgatcttga agtcaagtaa
     1741 caaggagctg ctctcaatat aaacaagatc atacttcatt cttgcgatca tttcttcaac
     1801 agttgaggca tagccaaact gcaccatacc ccaggatgtg agcccgggtt ttactttcag
     1861 caagtagcga aaataaggtg tgcgctcatt tatctggtcg atataaaatt ttctttcagg
     1921 ccggggaccg acaaaactca tttcgccttt taaaatattc catagttgcg gcaattcgtc
     1981 gagacgccat ttacgcatca ctcttcccca tgatgttata cgcggatcat tttcggatga
     2041 caacgccggt ccattctttt cggcatcagc gtacattgag cgaaacttat ggatgttgaa
     2101 ccgctttcct ttatagccaa ttctttcctg cgcaaacatt accggcccct ccgaggacaa
     2161 cttggtgcgc actgacacga agagcatcaa gggcgaaaga ataattatcg ataccaatga
     2221 accagctaca tcgaatagtc gtttcacatt gctttgccag gctggcatca cggccgtgtc
     2281 gatatccatc catacagctc caggcacatc ctttattttt accgaaccgg ccaaaatttc
     2341 gagcgtatcc ggcacaagtt ttatctcgac atcttcgccg cttaatttac tgatcagttt
     2401 ttcggtgagc gcctgctctg atttttcaag tgcgaccacc acctggtcga tattgttttt
     2461 gcgtattact tcttcaacat tgtctacagt accgagaaag ggtaaattcc ggctgacacc
     2521 attttttatg tttttttcat tcgagagaaa tccgagcaca tgatagccgg gcaatgacaa
     2581 attccttctt aactcattat aaaccgcgac ggatttttga ttgttgccga tgataattga
     2641 attgaataaa tagttatgcc gacggatctt tttcttggca atgctgataa gcaacagcct
     2701 gccgaccgat gtaaacacca actgcagtat gatcagcatg aagaaagcat tatagaaata
     2761 tgagtagtgc ggttcgttat cgttcaaaaa gagtatgaat agcaagataa ctgaaccgat
     2821 gaggcattga ttgaaggttg atgtgagttc ttttagtctc gacttcttat atagcgagtc
     2881 gttgtaagaa cctgcaaccg caaaaagtgc tgtccagaag atgagcgcca acaaaaaaga
     2941 cttataaaaa aacgggtccg cggtaaacag tccactgtat gttaatggct cctcattcaa
     3001 aaggatcttc ctttgatgag acaccagtat ccacgttatt gcagatgcga cgacatctga
     3061 aagaacatac cagccagttt tgatggtttt gaattgctgc atggcaagcc gatcaagcca
     3121 agatagcagt attgctaatt ttttccaaaa tacggtgagc cgtttccatt gcgagatacc
     3181 cgtctatttc gtttacgggc ggtggcgcat ttgtttcaat agcatgcacg aaggcctgca
     3241 gttcttcgtg aattgcattt actgcttcaa ttggcggatt aattatggaa atcgttttac
     3301 tgcccgacgg cgtttcgata tcaaacgaaa aagcatcctc gtcgccttcc gttttgagtt
     3361 ttatgatctc ggttttcttt tcgaggaaat cgatcccgat gtaagcatct ttctgaaaca
     3421 agcgcatctt ccgcatcttc ttcatgctga tgcgactgct cgtaagattt gcgacgcacc
     3481 cattattaaa ttcgatcctc acgttggcta tgtcaggtgt atcagtcatc accgctactc
     3541 cgctcgcgga tatatgcttt acatcgcttt ttaccaattt caaaataatg tcaatgtcgt
     3601 gtatcatgag atcgaggatg acgctcactt cagttccccg cggattaaat tgagcaagtc
     3661 ggtgcacttc gatgaacatt ggattgaggg aaatatcttt gatcgcaaga aaggcaggat
     3721 taaatcgttc gacatgccca acctggaact tgacgcctgc ctcctgcacc atttcgacca
     3781 ggtgctttcc ttcttcaagc gtatcggcca tcggtttttc tacaaaaaca tgtttgcctt
     3841 ttctaaccgc ctgctcacat agttcaaaat gatacggcgt aggtgcaacg acatcaaccg
     3901 cctcgacgac atccattagc gcggacgctt ctttgaaccg tttaagtttg tatttttttt
     3961 ccacttcgcc tgcggtttca tcggccggat caaagaaacc aaccagctgc gcatttttta
     4021 tttctttcca attattgaga tgaaattttc cgagatgccc cacgccgaaa acgcccactt
     4081 ttagcataaa aaaaatttat caggtaaaga tagtgattag gataaaggag ttggaattgc
     4141 gatgcccgcg gctatcaaca atcgttcatc actttgttag aattctttac taattctttc
     4201 ataaaattgc agattgcatt catcaaagct ttatcttgtt tgatatttgc aggctcaaaa
     4261 aatacacaag attgccacca tgcatttatt aagagttttg tcagtccccg cttttatcgt
     4321 atttacttac accgcctcag cccagatcaa cacaaaaaca tggtatctcc aggacccgtc
     4381 gacagattcg gttgatggga tcagccttgc gaaaacatac caatttttaa aagggaagaa
     4441 atcaacaccg gtgatcgtag ccgtgatcga ttcaggagtt gatactacac atgaggacct
     4501 taaaaaaatt ctttggacga acaagaacga gatacccggc aacggaattg acgatgacca
     4561 taacggttac gtggatgacg tgcacggctg gaatttcctc ggaaataaaa acggccagaa
     4621 cattaataag gcatctgacg aaaaatcacg ggtatattat aaatacaagg aacgttacga
     4681 aggcaaaact atcaatgaag attctttaag cgaagatgaa agatggatct acgaagagtg
     4741 gacgagagcg tcagctgata tgaccatttc aagcgatgag caaatggaag tgctgatgct
     4801 ggaagcgctc gacaaaacat tgaggaaaca ggatgcgata ctgcaacagg aacttggtaa
     4861 atcagaatac tcgctgaacg accttgagct tacgcagaac ctgagcgtga aaggaaagca
     4921 agcaaaaaca agctttttga atattcttaa gatggagcag gttgaacctg aaaccaccaa
     4981 caaagctgtt ctgcaggacc ttgaagaata tctcgacgaa aaaagaagat tgctcgaaaa
     5041 caaaacggca gcgccaccgg attatcgcgc ggaaatcata aaagataatt acgacgacat
     5101 caacgataag ttttatggca ataatgatat aatgggtccc gatgccgaac atggcactca
     5161 tgttagtgga acaattgcag cagtgcgcga taataacata ggcgtccagg gcatcgccga
     5221 caacgcgcag atcatgatga tacgtgctgt gccggatgga gatgaatacg acaaagacat
     5281 tgctttggca attaaatatg cggttgataa cggagcgaag gttgtgaaca tgagttttgg
     5341 caaaagttat tctccgcaaa agaaatgggt agatgaagca gtgaagtacg cagaggacca
     5401 cgatgtgttg ctcgtgcacg cggcaggtaa tgagtcgaac aatgtggact cagttcaaaa
     5461 tttccccaac cgcgagctgg tttttgaaaa aacgaccgca ccgaatttta tcaatgtggg
     5521 cgcgtatggc gatccacata taaacgacgg aaaatttatt gcatacttca gcaactatgg
     5581 aaaaaactct gttgatgtct tcgcgccggg cgtgaagatc tattcaacga ttccacatag
     5641 ttacggcttt cacgacggca cgagcatggc ttcacctgta gtaaccggca tcgccgcact
     5701 catacgttcg tactatccgc aactttcagc ggagcaagtg aaatatgcga ttgaaaaatc
     5761 ggtgaagcaa tatactgacc tggtgaataa acctggcgaa tacaacagta cggaacagat
     5821 ttcgatcaac gaattaagca agactggcgg atttgtaaat gccgacgcgg cggtagaact
     5881 tgccgcaaca ctgaagcccg aagcgccgca gaagatccag gataaaaaga aggcttcttt
     5941 ccagaataat attcaaacga atcaataatg gcaagaccac aagcgcacga atgcgctccc
     6001 tattaccaga aatatattgc tttggctaaa ggagattcgg ttaatgagat cgtcaaaaat
     6061 catgctttcg aattgcagga attctataac agcctccctg atgctaaagc ggatttcact
     6121 tacgcagatg gcaaatggac tctaaaacag gttttgcaac acgttacaga tgcagagcgc
     6181 gtgtttgcat atcgtgcttt acgcatcgct cggaacgata caactcccct cgcctctttt
     6241 gatgaaaacg tatacgttga aaatggattt gcaaacgaac gcgcgttgtc gtcgttgaag
     6301 caggagttta attcagtgcg tgcagcaacg gatgtatttc tgctgggctt gaatgaggaa
     6361 caaataaatc gcctcggcac agcttctaat aacccggttt cagtaaatgc gctcgcattt
     6421 atcatctatg gccatcttct gcatcatcaa aatatttttc gggagcgtta cggtttatag
     6481 atttcaaaaa taatttcttt cgtattttgt aacctgaata aacacactat tgtggtgtct
     6541 aaaacctttt cagcatatca ttactcgaat agcatcataa aacagccagg acgttttgaa
     6601 agggaaatta cgacctcaat agatgacgag cttcagtttt cttgttcaaa aacgtaaggg
     6661 atacttggcg aaaaataatt gaattggcga aaggctagca caaccatgtc gattctccta
     6721 acctttttaa aacactaaac aatgaaatgt gcaatagcaa ttctactctg gcctcttatt
     6781 ttcacatttt tttcctgcag aaagcaattc tcagaacaaa cgttttcctc aagaagtaat
     6841 aaccattttt taagcagcac accaaacatc attgttatcc tgggagacga tgttggttat
     6901 gaaattccga cgtatacagg agggcaatct tattcaacta ccaatattga ttacctggcg
     6961 gcaaatggc
//
LOCUS       DASQJI010000183         4106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_16763,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000183 DASQJI010000000
VERSION     DASQJI010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16763"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VEV83_05490"
     CDS             complement(<1..500)
                     /locus_tag="VEV83_05490"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HYK44597.1"
                     /translation="MIALLLILVPVLGGIAAFFINNLRTVRLFSIFVALVTLAVSIAG
                     IFSSQTTQLLYDVPWLSEFNSRFTIGLDGLSKILSLLNAISLVVIIASTYKNVYANAN
                     RFYGLMFLCQAGMMGVFLSMDALLFYFFWELALIPAYFLCSTWGGERRIQVTFKFFIY
                     TFVGSLL"
     gene            complement(507..2408)
                     /gene="nuoL"
                     /locus_tag="VEV83_05495"
     CDS             complement(507..2408)
                     /gene="nuoL"
                     /locus_tag="VEV83_05495"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HYK44598.1"
                     /translation="MVYLVPLFPLIGFLINGLFRNSLSKNLISLIGCGVVLASFIVSI
                     VLFLDVRSHGAMPVHPLFQFISVEAFKIDFAFQVDQLSCLFLLIITGVGFLIHVYSTS
                     YMHDETPDHFARYFSYLNLFVFSMLILVLGANYVIMFIGWEGVGLCSYLLIGYWFKND
                     NYNYAATKAFVMNRIGDLGFLLAIFWMLARLGSASFGDVFIETSRLTPADVTGITVLL
                     FVGAMGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGIYMVARSNVLYSLSLVAQ
                     NLVAIIGLATALLAATIAIKQNDIKKVLAYSTVSQLGYMFLGLGVGAYSSAVFHVMTH
                     AFFKALLFLGAGSVIHAIHNQQDIRYMGGLKKYLPITNATFLIGCIAISGIPPFSGFF
                     SKDEILAAAFSRNQVYWALGVIGSGMTAFYMFRLYATTFLGTFRGSEEQRNHLHESPS
                     PITIPLIILAALSAIGGFVNIPEVFGGEEQLSKFLSPVVPGGAQGHVLSSRTEFSLMA
                     VSVVVAVIAIFFAVRKYTKKPEIGEPQGFGKVLADKWYIDELYDAIIVNPLHSIAGFF
                     KNVVEKSGIDGFVNGVGTFIQYSSRRIRLVQNGRVGTYILLMVFSILLLWLVFWWEAQ
                     IILFFQKIF"
     gene            complement(2508..2855)
                     /gene="nuoK"
                     /locus_tag="VEV83_05500"
     CDS             complement(2508..2855)
                     /gene="nuoK"
                     /locus_tag="VEV83_05500"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HYK44599.1"
                     /translation="MPIQYYIILAAALFCIGVAGVLIRRNAIIIFMCIELMLNSVNLM
                     LVAFSKMHYAIGSTAGAGKEVALNIGSDAQLFVFFIMVVAAAEVSVGLAIIVMMYRNV
                     HSIDINFLNRLKN"
     gene            complement(2961..3464)
                     /locus_tag="VEV83_05505"
     CDS             complement(2961..3464)
                     /locus_tag="VEV83_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HYK44600.1"
                     /translation="MTATEILFWILSALALFSALMVLVSKNPVHSVLWLIVVFFAISG
                     HYILLNAQFLAIVNLIVYAGAIMVLFLFVIMLMNLSATGEPQRNFLMRLAGIVAGGLL
                     LSVMISAVRSAGELTGKQAIMNEGDIGLIQNLGKVLFTQYVVPFEISSVLFLSAMVGA
                     VVIGKKD"
     gene            complement(3473..4021)
                     /gene="nuoI"
                     /locus_tag="VEV83_05510"
     CDS             complement(3473..4021)
                     /gene="nuoI"
                     /locus_tag="VEV83_05510"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HYK44601.1"
                     /translation="MITLTNRSAPVDRKPMTFLESLYLWNILKGMAITLRHFFKKKAT
                     ISYPEQKREFSPVFRGLQVLNRDEEGRERCTACGLCALACPAEAITMEAAERMPGEEH
                     LYREEKYAAKYEINMLRCIFCGFCEDACPKDAIYLSETFAPSAYNRKNFIYTKEDLLI
                     PDPKTQPDEFERARGLREQKNR"
BASE COUNT         1306 a          971 c          818 g         1011 t
ORIGIN      
        1 agcaatgaac caacaaatgt gtaaatgaaa aatttaaaag tcacctgtat ccttctttcg
       61 ccgccccagg tcgagcaaag aaaataggct ggtatcaatg caagctccca gaagaaataa
      121 aagagcaatg catccataga aagaaacaca cccatcattc cggcctggca caaaaacatc
      181 aggccgtaaa accggttggc atttgcatat acgtttttgt aagttgaagc aatgataaca
      241 acgagcgata tggcgttgag caggctgagt atcttgctta aaccgtctaa ccctatcgta
      301 aagcggctat taaattcaga tagccaggga acatcataaa gcaactgtgt tgtttggctg
      361 gaaaaaattc ctgcgatgga gacggccaat gtaaccagcg ccacaaaaat ggaaaacaat
      421 cttacagttc taagattatt tataaagaac gccgcgatgc ctccaagtac aggaacaagt
      481 attagtaata aagcaatcat ccgcgattaa aagatttttt gaaagaaaag tatgatctgc
      541 gcttcccacc aaaacaccag ccacaataac aatatcgaaa acaccatcaa taaaatatac
      601 gtgccgacgc gtccattttg aacgagcctt attcttcttg atgagtattg gatgaatgtg
      661 ccgacgccat ttacaaaacc gtcaatgccc gatttttcaa ctacattttt aaagaagcca
      721 gcgatgctat ggagcgggtt aacgataatt gcgtcgtata attcatcgat ataccatttg
      781 tcggccagca cttttccaaa accctgcggt tctccgatct ctggcttttt cgtgtattta
      841 cgcacggcaa agaaaattgc aatcacggcg acgacaacag agactgccat caaactaaat
      901 tctgtcctgc tggatagcac atgcccttgt gcgccgcctg gaacaaccgg cgacaggaat
      961 ttgcttaatt gttcttcacc tccgaacact tccggaatgt tgacgaagcc accgatcgca
     1021 ctcaatgctg ccagtatgat caacggaatt gtgatcggtg aagggctttc atgtaaatga
     1081 tttcgttgtt cctcacttcc tctgaatgta ccaaggaatg ttgtagcata caatcgaaac
     1141 atataaaatg cggtcattcc tgaaccgatc acgcccaaag cccaataaac ttgattacgg
     1201 ctgaacgcag cggcgaggat ctcatccttg gaaaagaatc cactaaaagg gggaatacct
     1261 gagatcgcaa tacacccgat caaaaatgtt gcgtttgtga tcggcaaata ttttttcaag
     1321 ccacccatgt aacgaatatc ctgctgatta tgtattgcgt ggatcaccga gcctgcaccg
     1381 aggaacaaaa gtgctttgaa aaaggcatgc gtcatcacat gaaaaaccgc gcttgaatac
     1441 gcaccgacgc caaggccgag gaacatgtac ccgagctggc tcactgtgga gtatgccaat
     1501 acctttttaa tatcattttg ttttattgcg atcgttgcgg ctaatagagc tgtagcaagc
     1561 ccaatgatcg caactaaatt ctgtgcgacg agacttaacg agtacaacac attgctgcgc
     1621 gcaaccatat aaattcccgc tgtaaccatc gtggcagcat gtatcaacgc cgaaaccggc
     1681 gtgggacctg ccatcgcgtc gggcagccag gtgtataaag ggatctgcgc acttttaccc
     1741 atcgcgccga cgaacagtaa aacggtgatg ccggtaacat ctgctggagt taagcgtgaa
     1801 gtttcaataa acacatcccc aaacgaagcc gaaccgagtc ttgcgagcat ccaaaatatg
     1861 gcgagaagaa aacccaggtc gccaatgcgg ttcatcacaa acgccttcgt tgcagcataa
     1921 ttataattat cgtttttaaa ccaataacca atgagcaggt aagaacagag ccccactcct
     1981 tcccatccaa tgaacattat cacatagttt gctcccagca caaggatgag catggagaac
     2041 acaaataaat tcaggtatga gaaatagcgc gcgaaatgat ccggagtttc gtcgtgcatg
     2101 taggatgtag agtacacatg gatcaagaat ccgactccgg taatgatcag caggaacaag
     2161 cacgagagct gatcaacctg gaaagcaaaa tctatcttaa aagcttcgac gctgatgaat
     2221 tggaatagcg ggtgaacggg catcgcaccg tgcgatctta catcaagaaa caaaacaata
     2281 cttacaataa aagaagcaag aacaactccg catccgatca gtgaaattaa attcttcgat
     2341 aacgaatttc gaaaaagtcc gttgatcaaa aaaccaataa gcggaaaaag cggaactaaa
     2401 taaaccataa atgaaaatcc aaattttcaa aaatcaagaa ccaaaaatta aagtcacaag
     2461 tgaaagtcaa aaacaactga ccgtctgtgc atttttactt ttgcttttca atttttgagc
     2521 ctgttcaaaa aattaatatc gatcgaatgc acattacggt acatcatcac aattattgcg
     2581 aggccaacac ttacttctgc agcggcaacg accataataa agaacacgaa caactgcgca
     2641 tctgacccga tattgagggc cacctcttta ccggcaccag cagtactccc gatcgcgtaa
     2701 tgcatttttg agaatgcaac gagcatcagg ttcactgaat tcaacatcag ttctatgcac
     2761 atgaagatga tgatggcatt ccgccggatc aacacaccgg ccacaccgat acagaacaat
     2821 gcagctgcta agattatgta atactgaatt ggcataccct aaatccctaa agggactttt
     2881 ttgccctaaa tccctaaagg gacttaatgg cggttaaaaa ttcaaatgct gttgcctttc
     2941 tcccctttag gggatggggg ctaatctttc ttcccgatca ccaccgctcc gaccatcgca
     3001 ctcaaaaaca aaacactgct tatttcaaat ggcacaacat attgtgtaaa caaaaccttt
     3061 ccgagatttt gtatcagtcc tatatcgcct tcattcatga tcgcctgctt accggtgagt
     3121 tctccggcgg aacgaaccgc cgagatcatg acgcttaaca agaggccacc ggcaactatg
     3181 cctgccagcc tcatcaaaaa atttcgctga ggttcaccgg tcgcactaag attcatgagc
     3241 atgatcacaa agaggaataa aaccatgatg gcaccggcat acacgatcag gttaacgatc
     3301 gccaggaatt gagcgttcag caaaatatag tgaccggaaa tagcgaagaa aacaacaatg
     3361 agccagagta cgctatgaac aggattcttg ctaaccaaca ccatcaatgc actaaaaaga
     3421 gcaagcgcac tcaagatcca gaataatatt tctgtcgcag tcatcaggta atttatcggt
     3481 ttttctgttc cctcaaacct ctcgctcttt caaattcatc cggttgtgtt tttggatcag
     3541 gtattaacag atcctctttt gtataaataa aatttttacg gttatatgcg gacggcgcaa
     3601 acgtttcaga aagatagatc gcatctttcg gacaagcatc ctcacaaaag ccgcaaaata
     3661 tgcaacgcag catattgatc tcatacttgg ccgcatattt ttcttcacga taaagatgtt
     3721 cttcgccggg catgcgctct gcagcttcca tggttatagc ttcagcagga caagctaaag
     3781 cacaaaggcc acaagcggtg caacgctctc ttccttcttc gtcgcggttc aaaacctgca
     3841 gaccgcgaaa cacagggcta aattctcttt tctgttccgg gtaacttatc gtggctttct
     3901 tcttgaaaaa gtgacgaagc gttatcgcca tgccttttaa gatgttccac aaatacaagc
     3961 tctccaggaa cgtcattggt ttccggtcga ctggtgcact cctgtttgtt aatgttatca
     4021 tttagaaaat tcaaaagtaa aaagtaacaa gtcaaaataa cattcgcttt cttccgtctt
     4081 tttaatttga cttttaattt gacgtg
//
LOCUS       DASQJI010000184         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_324255,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000184 DASQJI010000000
VERSION     DASQJI010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324255"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1547
                     /locus_tag="VEV83_05515"
     CDS             <1..>1547
                     /locus_tag="VEV83_05515"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HYK44602.1"
                     /translation="TTLGRGGSDYTAAIFAAAMNANSLEIWTDVTGMMTADPRWVPNA
                     KTIERISYQEAMELSHFGAKVIYPPTIQPVLQKNIPTHIKNTFAPDQKGTLIEQVVTT
                     DSPQSAVDGGGIITGISSINAIALLSLEGSGMVGIPGFSKRLFEALANEKINVILITQ
                     SSSEHSICVAVNAAAADRAKETVDKTFEIEIHQGKVEPLKIEQGHSIVALVGDKMKSH
                     TGISGKMFESFGRNGINVRAIAQGSSERNISAVIATDDVKKCVNVLHEAFFESTYKQL
                     NIFVVGVGNVGGKLLDQLKQQREFLLQHLNLQARVAGIANSKKMLFAYEGNDLRLDNW
                     KEALQQGNDMNLELFAETIIRKNLRNAVFVDVTADEKVVTVYQKLLSKAVSVVACNKI
                     AASSPYKDYNHLKSLAREYNALFLFETNVGAGLPVIGTLNDLRRSGDKVNKIQAVLSG
                     TLNFVFNNYDGTKLFADVVKQAQDEGYTEPDPRLDLGGTDVMRKILILAREAGEHIEM
                     DDISNSA"
BASE COUNT          456 a          326 c          398 g          367 t
ORIGIN      
        1 caaccacact cggccgcggc ggctcagatt acactgcagc aatttttgcg gcggcgatga
       61 atgcaaattc cctggaaata tggaccgatg ttaccggcat gatgacggca gatccgcgct
      121 gggtgccaaa tgcaaaaacg atagagcgca tatcatacca ggaggcaatg gagctatcac
      181 attttggagc taaggttatt tatccgccga cgattcaacc cgtgctgcaa aaaaatattc
      241 caacacacat aaaaaacact ttcgcacctg atcaaaaagg tacgctaata gaacaagtcg
      301 tcactaccga ttcaccgcag agcgccgtgg atggcggcgg cattatcaca ggcatttcaa
      361 gcatcaacgc aattgcgtta ctaagcctgg aaggaagtgg tatggtcggc atccccggat
      421 tttcaaagag gctttttgaa gcgttggcaa acgagaagat caacgtcata ctcatcaccc
      481 agagttcgtc ggagcattcg atctgtgtcg ctgtaaatgc cgcggcggca gaccgggcaa
      541 aagaaacagt ggacaaaact tttgaaatcg aaatccacca gggaaaagtt gagccattga
      601 agatcgagca ggggcattcg atcgttgcgc ttgtaggcga caaaatgaaa agccacaccg
      661 gcattagcgg aaaaatgttc gagtcattcg gccgcaacgg tattaatgtg agagcgatcg
      721 cacaaggttc ttctgaaaga aatatttccg ctgtaattgc tacagatgac gtgaagaaat
      781 gcgtgaatgt tttgcatgaa gcattctttg agtctaccta taaacagcta aatatttttg
      841 tagttggtgt cggaaatgtt ggcggcaaat tacttgacca gctaaagcag caacgggaat
      901 tcctgcttca acacctgaac ctgcaggcac gcgtagctgg catcgcgaac agtaaaaaga
      961 tgctgtttgc ttacgagggt aacgatctgc gattggataa ttggaaggaa gcattgcagc
     1021 agggcaatga catgaacctc gaattatttg ccgagaccat tatcaggaaa aatttgcgaa
     1081 atgcggtgtt cgtcgatgta acggctgatg agaaagtggt aactgtatac caaaaacttt
     1141 tgtcaaaagc agtttcggtt gttgcgtgta acaagatcgc tgcatcgtcg ccttataagg
     1201 attacaatca tcttaagtcg ctggccaggg agtataatgc attgtttctt tttgaaacga
     1261 acgtcggcgc tggtttgccg gtcatcggga cattgaatga tctgaggcga agtggtgata
     1321 aggtcaacaa gatacaggcg gtgctttcgg gtacactgaa cttcgttttt aataattatg
     1381 atggaacaaa actttttgcg gatgtcgtaa agcaggcgca ggatgaaggc tataccgaac
     1441 ctgatccacg tttggacctc ggcggtaccg atgtgatgcg aaaaatattg atcctcgcac
     1501 gtgaggcagg cgagcatatc gaaatggatg atatcagcaa cagcgca
//
LOCUS       DASQJI010000185         3689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2934923,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000185 DASQJI010000000
VERSION     DASQJI010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2934923"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2214)
                     /locus_tag="VEV83_05520"
     CDS             complement(<1..2214)
                     /locus_tag="VEV83_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44603.1"
                     /translation="MLKNFFKISYRNLLRNKGFSFINISGLAVGMASAILILLWIQNE
                     VSYDQFHANKDRIYEAWNKATFSNKLQCWNTTPKILARTLEHDLPEVERAVRVNWPSS
                     YLFSVGEKRLTLQGNIVDSGFLQMFSFPLLKGNPNTALNDMHSIVLTESLAKDLFGGE
                     NAMGKVIKLDNQDNFTVTGIAKDLPNNTRFDFNYLLPWSYLRYKGDDDSNWGNNSTRT
                     YVMLKQNATLASVAPKIKTLKTKYDTEDPKWEMFLYPLSRWRLYSSFTNGVEDGGGQI
                     EFVRLFGIIAAFILLIACINFMNLSTARSEKRSREVGIRKVVGAKRIYLVAQFIGESI
                     LIAFIAGILAVGIVQLCLPGFNELTGKKLFIDYGNLYFWLCGIAFVIFTGILAGSYPA
                     FFLSSFQPVAVLKGTFKAVHALITPRKILVVAQFTFAIILIICTIIVKQQIDYAQARQ
                     SGYDKNNLVYVFIEGDVGKKYMLLKNELLSSGVATSVTKTSSPLTEGWSDTWGFQWEG
                     KDPNDKTDFDRYVADDGLTKTAGMQLVAGRDFDLKNFPTDSFGVILNESAVKAMNFKN
                     PIGQIVKEDTNYHVVGVIKDFILRSPYLPTKPMVIKGAHDQWANVINIKFNDKNSTAR
                     NLKATEAIFKKYNPEYPFQYHFVDDEYAKKFEDEKRTGTLAGVFAALTIFISCLGLFG
                     LATYMAENRVKEIGVRKVLGASVAGISALLSKDFLKLVLVAFIVAAPVAWWLMTVW"
     gene            complement(2303..2980)
                     /locus_tag="VEV83_05525"
     CDS             complement(2303..2980)
                     /locus_tag="VEV83_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK44604.1"
                     /translation="MIKISELEKIYRTEEVETVALNKLSMEVKEGEFVAVMGPSGCGK
                     STLLNILGMLDDPDAGSFIFNGVEVAHFNERKRADLRKNNIGFVFQSFNLIDELTVFE
                     NVELPLIYTGVKAAERKKRVEQVLDKVQIMHRRNHYPQQLSGGQQQRVAVARAVVNHP
                     KLILADEPTGNLDSNNGNDVMQLLTELNEQGTTIVMVTHSEHDARYSHRIIRMLDGQT
                     VTENILI"
     gene            complement(3022..>3689)
                     /locus_tag="VEV83_05530"
     CDS             complement(3022..>3689)
                     /locus_tag="VEV83_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HYK44605.1"
                     /translation="SQDSISNKQQLSQAQQSYEGSQNALAVMRQKVGDLIVRAPVDGQ
                     LTSLDAEVGQSKNKGERLGQLDVMGAYKVRVEVDEHYLSRIYTGLRGTFTFADTNYVL
                     EIKKVYTQVSNGRFQVDMEFVGKVPRGIRRGQTLQILLALSDERTALLLPKGGFYQQT
                     GGNWIFKVTNDGSKAYRVDIQLGNQNTDYYEVLSGLQAGDKVVTSSYETYGDMQELVL
                     KGK"
BASE COUNT          930 a          883 c          785 g         1091 t
ORIGIN      
        1 ccacacggtc atcagccacc atgccacagg tgcggcaacg atgaacgcaa ctaacaccag
       61 tttcagaaag tcttttgaaa gcaaagcact tattcctgca acagatgcac cgagcacttt
      121 acgcactcca atttctttca cacgattttc tgccatatag gtagcgaggc cgaacaagcc
      181 aagacatgaa atgaagatcg tgagcgcagc aaacacgccg gcgagtgtgc cggtgcgttt
      241 ttcatcttcg aatttttttg cgtattcatc atccacaaaa tgatattgga acggatactc
      301 ggggttatat tttttgaaga tcgcttcagt cgctttcaaa ttcctggccg tcgaattttt
      361 atcgttgaat ttgatgttga tcacattagc ccattggtca tgcgctcctt ttataaccat
      421 aggtttagtt ggcaaatacg gagaacgcaa aatgaaatcc tttatcacac ccactacatg
      481 gtaatttgtg tcttccttta cgatctggcc aatcggattt ttaaaattca tcgctttcac
      541 ggcagattcg tttagtatca cgccaaatga gtcggtggga aaatttttta gatcaaaatc
      601 tctgcctgct accagttgca taccggcggt ttttgtaaga ccgtcgtcgg ccacataacg
      661 atcgaaatcc gttttatcat tcggatcttt tccctcccat tgaaaacccc atgtatcgct
      721 ccacccctct gtgagcggtg aacttgtttt tgtaaccgat gttgccacgc cggaggataa
      781 taattcattt tttagcagca tgtacttctt gcctacatct ccctcgatga aaacataaac
      841 aagattgttc ttgtcgtatc ctgattgtcg cgcctgcgcg taatcaattt gttgttttac
      901 gatgatggtg cagataatga gaatgatggc aaatgtgaac tgcgctacta ccagtatttt
      961 gcggggagtg atgagcgcat gcactgcctt gaaagtgccc ttcagtacgg cgacgggctg
     1021 aaacgatgat aagaaaaatg caggatagct gcctgctaaa atgccggtaa agatcacgaa
     1081 ggcgatcccg caaagccaga agtataaatt cccataatca atgaaaagtt tttttccggt
     1141 gagttcatta aagccgggca ggcaaagttg tacaattcca acggccagga tgccagcaat
     1201 aaacgcgatc aggatcgatt caccaataaa ctgcgctacg aggtaaattc gttttgcacc
     1261 gacgaccttt ctgataccaa cctctcttga acgcttctcg ctgcgtgctg tgctcaggtt
     1321 catgaaattg atgcatgcga tcaggaggat gaacgccgcg atgatcccaa acaacctgac
     1381 aaattcaatc tggccgccgc catcttcaac accatttgta aaacttgaat acaagcgcca
     1441 cctgctgagg gggtataaaa acatttccca tttgggatct tctgtatcgt attttgtttt
     1501 gagcgttttt attttcggtg ctaccgaagc gagcgttgcg ttttgcttca gcatcacgta
     1561 cgtgcgggtt gagttatttc cccagttcga gtcatcatca cctttatacc ttaagtaaga
     1621 ccagggaagc aggtaattaa aatcgaagcg cgtgttattg ggaagatctt ttgcgatccc
     1681 agtcacggtg aagttatcct ggttgtcgag tttgatcacc ttacccattg cattctcacc
     1741 gccaaacagg tctttagcga ggctttccgt aagcactatt gaatgcatat cgttcagggc
     1801 cgtatttgga ttgcctttca gcaacgggaa actgaacatt tgcagaaacc cggaatcaac
     1861 aatgttgccc tgtagggtca accttttttc accaacgcta aataaataac tgctcggcca
     1921 atttacacgc accgcacgtt ctacctcagg caggtcgtgc tctaatgtcc tggcaagaat
     1981 tttcggcgtg gtgttccagc attgcagctt gttgctgaaa gttgccttgt tccatgcttc
     2041 gtatatccgg tctttatttg catgaaactg atcgtagctt acctcatttt gtatccataa
     2101 taaaataagt atggcgctgg ccatacctac tgcgagaccg gaaatattta tgaaggaaaa
     2161 tcctttattc ctgagaagat ttctatatga tattttaaaa aaattcttga gcataacgaa
     2221 tccctacttc ttttgaagcg ccttggttct cttgactgtt ccagtaattt ctccatgcac
     2281 cgggcagtaa ggatctactg ctctagatga ggatattctc agttaccgtt tggccgtcga
     2341 gcatgcggat gatgcgatgg ctataacgtg cgtcgtgttc gctgtgcgtt accattacga
     2401 tggttgtacc ttgctcgttc aattcagtaa gcagttgcat tacgtcatta ccgttattag
     2461 aatcgaggtt accggtaggc tcatcggcga ggatcagttt tggatgattg accacagccc
     2521 tggcgaccgc gacacgttgt tgctgaccac ctgaaagttg ttgcggatag tggttacggc
     2581 gatgcatgat ctgcacttta tcgagaacct gctctactct ttttttgcgc tctgctgctt
     2641 ttactcctgt gtaaataagc ggcaattcaa cattttcaaa aacagtaagt tcatcaatga
     2701 ggttaaagct ctggaacaca aacccgatat tattcttccg gagatctgcg cgtttgcgtt
     2761 cgttgaaatg agccacttcg acgccgttga aaatgaagct gcctgcatca ggatcatcga
     2821 gcattcctaa gatattaagc agtgtcgatt tgccgcaacc ggaagggccc atcaccgcca
     2881 caaactctcc ttcttttact tccattgaca acttgttgag cgcaacggtt tcaacttctt
     2941 ccgtgcggta aattttctcg agttctgaga tctttatcat tttgatgttt tttgatctat
     3001 taaagtatgt gattaaaaaa tttatttccc ttttaaaacg agctcctgca tgtcgccgta
     3061 ggtttcatag ctcgatgtaa caactttatc acccgcttgc aatccactta atacctcata
     3121 ataatcggtg ttctgattac ccagttgtat atctaccctg tacgctttgc tgccatcgtt
     3181 tgttacttta aagatccaat tgccgccagt ctgctggtaa aagccgccct tgggtaacaa
     3241 aagtgcggtt ctttcatcgc tcaaggctaa aagtatctgc agtgtttggc cgcggcgaat
     3301 tccccttggc actttaccga cgaattccat atcaacctgg aaacggccgt tgctcacctg
     3361 tgtataaact ttctttattt caagcacata attcgtgtct gcaaaagtga aagttccgcg
     3421 aagacccgta tagatgcgcg aaaggtagtg ctcatccacc tcaacccgaa ctttgtacgc
     3481 gcccatcaca tcgagctggc cgagcctttc gcctttattc ttgctttgcc ccacctcggc
     3541 atccagcgac gttaattggc cgtcaacagg cgcccgcact atgaggtcgc ctactttctg
     3601 gcgcatcaca gccaacgcgt tttgcgaacc ttcataagat tgctgcgcct gggataattg
     3661 ttgcttattt gagatcgaat cctgcgata
//
LOCUS       DASQJI010000186        10484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1553212,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000186 DASQJI010000000
VERSION     DASQJI010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10484
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553212"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VEV83_05535"
     CDS             <1..240
                     /locus_tag="VEV83_05535"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HYK44606.1"
                     /translation="EWTRLAKQQSSAVLSSVPVSNKVMPSLNGMGLKDALYICENAGL
                     VVKVRGLGKVTDQSINAGSPIAKGQVVSLDLKMSN"
     gene            237..1700
                     /locus_tag="VEV83_05540"
     CDS             237..1700
                     /locus_tag="VEV83_05540"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HYK44607.1"
                     /translation="MKKLEDILYKVRIISIHGDRNVEVSDIFIDSRNIDNDSLFIAVK
                     GEKFDGHNFIQQSLVKGARVIVCEELPDYLDNTVTYVQVQNSHEASAYIAHNFFDEPS
                     QKMKLVGVTGTNGKTTVATLLFKLFSNLGYKCGLVSTVQNQIGSEIIPATHTTPDAIS
                     LNSLLRQMVDAGCSHVFMECSSHAIHQHRITGLRFAGGIFTNITHDHLDYHKTFEEYI
                     RVKKSFFDNLPGDAFALSNLDDKRGTVMLQNTPARKYYYSLKNLADFKGKILENVLTG
                     LVMQVNEKEVHFRLIGEFNAYNLLAVYGAGMCLNEQSEKVLLILSGLSGAEGRFDYII
                     SKQKIIGIVDYAHTPDALENVLGTIKRLRRGDEQVITVVGCGGDRDKTKRPLMAQIAT
                     EFSNRAIFTSDNPRSEDPLEILKDMEAGLNSAGKRKSISIADRREAIKTAVSFANSED
                     IILLAGKGHEKYQIIKNESLHFDDKEVLKEMFELLDK"
     gene            1770..3086
                     /gene="mraY"
                     /locus_tag="VEV83_05545"
     CDS             1770..3086
                     /gene="mraY"
                     /locus_tag="VEV83_05545"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HYK44608.1"
                     /translation="MLYYFFTWLHERYDISGARLFEYISFRAAMAVLFSLIIATVYGR
                     RVINLLRKNQIGETVRDLGLHGEQQKKGTPTMGGIIILLAIIVPSILFADLDKVYIRL
                     MLLCTIWLGVIGFLDDYFKLRARKKAIAEGKTFTKKDADGLAGVTKIIGQIGLGIIIG
                     ATLYFNSSVVVERELIGAQTTHPTLGTGEKVARDSNIIIRNINGIERRFAEVKTPITT
                     IPFVKSHEFNYSKLISWMSPTAEKYTWIVYIIIVTFIITAVSNGANITDGLDGLAAGV
                     SAIIGAGLGIFIFVSGNYVLADYLNIMYIPNLSELVIFIGAFVGACIGFLWYNTFPAQ
                     VFMGDTGSLALGGIIASLAIIVRKELLIPIFCGIFLIENLSVVIQVSYFKYTKRKYGE
                     GRRIFLMSPLHHHYQKKGYHENKISVRFWIVTILLVVASIITLKIR"
     gene            3135..4475
                     /gene="murD"
                     /locus_tag="VEV83_05550"
     CDS             3135..4475
                     /gene="murD"
                     /locus_tag="VEV83_05550"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HYK44609.1"
                     /translation="MLYKLAILGGGESGIGAAVLAKQRGYDVFLSDAGYINEKYKSEL
                     SEHKIEFEEGGHSGEKILAATEVVKSPGIPDKNELVSMIRAKAIPVISEIELAYRFKG
                     SSKIIAITGSNGKSTTTALIYHICKTGEMNCALVGNIGYSFAKQVAEDPKPLYVAEIS
                     SFQLDDIKEFRADVSVLLNITEDHLDRYDYSFEKYIDSKFRITENQTMEDYFIYNADD
                     EVITKKLQATRLHTNSLPFSMKHELTHGGWLKGKDMMVRLQEERINMSIYDFALKGKH
                     NQYNTMAATIAAATLGIRKEKIREAVKSFESLEHRMEFVATVRGIDFINDSKATNVNS
                     TWYALESMEKPVVLILGGIDKGNDYQLIEDLVKEKVKAIVCMGLDNKKIHKAFDSLVP
                     VIVDTASAKDAVNTSFRLSTKGDVVLLSPACASFDLFNNYEDRGRQFKNAVRDL"
     gene            4515..5873
                     /locus_tag="VEV83_05555"
     CDS             4515..5873
                     /locus_tag="VEV83_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HYK44610.1"
                     /translation="MVDKTFKNIEDVRLATNWREWKQGLGHGLRHRARGDKYIWTVVV
                     LLAIISLLAVYSATGSLAYKYYDGNTAVYLFKQLAFIVIGILVIYFMHRVNYTIYSRV
                     SLILYLVSIPLLIYTLFFGVEVNDASRWIKLPVLNLTIQTSDLARLALFMYLSRQLSR
                     KQNDIKDFKKGFLPLIIPVAIICILILPANLSTALLTGLTSLLLMFIGRASVKHILLV
                     LMIAAIPVLLIIAIAVSTYDGNKTDDNDNKSSISSTLNSLGRFGTWVQRTQDFIYAKD
                     AEIPYQVQQQNIAIANGGILFGLGPGNSKQRNYLPQAYNDSIYPIIIEEYGLLGGLFI
                     IFLYIVFLFRCIRVFRKCPYAFGAFLALGLSFTLAIQALANMAVGVNLIPVTGVTLPL
                     VSMGGSSFLFTCASIGIILSVARNIEQSEARGAGMNEIADEPGVSLIEVRDTSNERLV
                     KM"
     gene            5915..7066
                     /gene="murG"
                     /locus_tag="VEV83_05560"
     CDS             5915..7066
                     /gene="murG"
                     /locus_tag="VEV83_05560"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HYK44611.1"
                     /translation="MSEDEVIDDGTDSPFRRRSGLRLIIAGGGTGGHIFPAVAIANAI
                     KEKQPGTEILFVGAKGKMEMEKVPQAGYNIKGLDIAGYERSSLIKNIWLPFKLIKSFG
                     QVRSIVGSFRPDAAIGVGGYSSFPVLKYAQHKHIPTFIHESNSFAGKSNIWLGKSAAK
                     IFVSSSGMEKFFPADKIVITGNPVRKNIVQGSTTRTEALSFFGLDDAKKTILVVGGSL
                     GAKSINEVIASHILEFDSLGLQLIWQTGKTAASAYLERAKPLKNIWAGDFINEMNKAY
                     AAADIVISRAGAMAVAELCVVKKPVIFVPFPFAAEDHQTMNAKYLADRDAALLVKDEF
                     ASSKLFAEMVSLAKDEEKQDKLKNNIAAFAVTNADERIAEEILRSLPRR"
     gene            7084..8484
                     /gene="murC"
                     /locus_tag="VEV83_05565"
     CDS             7084..8484
                     /gene="murC"
                     /locus_tag="VEV83_05565"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HYK44612.1"
                     /translation="MKEQKDVKQMISSPLGDGGFVGLSSYFIGIGGIGMSALARYFKN
                     RGASVSGYDRSITPLTRELEAEGIDVHFDEDLDVIPKDADVVVYTPAVPEDHKELVYY
                     RENNYTVVKRSDVLQWITGRSYNICVGGTHGKTTITTMIAHVLRDSGYGCNAFLGGIS
                     ANYQTNFWPAENDVMVVEADEYDRSFLKLTPNVAVITAMDPDHLDIYGTHEEVMNAFI
                     AFSKKIKAGGCLVSKCGLERSDQLTADTHFTYSYDSADADVYATNIEAVQGSYKYDVQ
                     GEEWSLPNVELHMGGSHNIENSVAAITVAKYLRIDDDKIKKAIANFKGVKRRFEYVLK
                     NEKHILIDDYAHHPAELKALLSGVKNLYEEECTVIFQPHLYSRTNDLAPEFARSLDLA
                     DQVILLPIYPARELPMEGVTSEVILNEMTLPQKQILAKNAMLDWVRLYKPKLLVMCGA
                     GDIDALVDPVKEILTE"
     gene            8560..9585
                     /locus_tag="VEV83_05570"
     CDS             8560..9585
                     /locus_tag="VEV83_05570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44613.1"
                     /translation="MSAKTKIKTIGWSLLGLCCMVLLVAAMKSKSTEACKDIAITIEG
                     ATEHVFVKKADVVNVLSENNVRPGENLNHIDIGKLEGQLEQNAWIQDAELFFDNKQVL
                     HVKIFEREPIARVFTMQGGSFYIDSTALRLPVTENAVARLIVFTSFPSDKKILSQPDS
                     LVLADVKKIALYIKQDSFLTAQTAQVNITQHGTYELIPVVGDQIIRIGNADSLDEKFT
                     KLRLFYSQIWSKVGFEKYSVIDIQYHGQVVAVRRGQINGAPDTAKAVMQLAQAEKKLT
                     QVLRDTLYAAPMKQVSVDTVRAQTEKTVAGKKRSKTGAANHKDIEKKNSPGDKKPKAV
                     MPGKAKG"
     gene            9760..>10484
                     /gene="ftsA"
                     /locus_tag="VEV83_05575"
     CDS             9760..>10484
                     /gene="ftsA"
                     /locus_tag="VEV83_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HYK44614.1"
                     /translation="MNQSSNGTTAPAQYDDTGVPIIVGLDIGTTKIAAIAGRKNEYGK
                     LEILGFGRADSNGVQHGQVLNIDQTIKAIQQALLNCNKSNPDLEIRDVYVGVAGHHIK
                     SLQTRGDIVRQDPDTEIERTEIDQLIMNQRKTFIPAGDQIIDVIPQDFHVDNHQNIKD
                     PVGYNGVKVGANFHIITGDRNAIRNIYRAVDRSGLKTKDLVLQPLASASAVMSEIDME
                     AGVAILDIGGGTSDLAVFYDGIL"
BASE COUNT         3159 a         2113 c         2592 g         2620 t
ORIGIN      
        1 gaatggacaa gattagcgaa gcaacaaagc agtgcagtgt tgtcaagcgt gccggtctcg
       61 aataaggtaa tgccttcttt gaacggaatg ggtttaaagg atgctttgta catatgcgaa
      121 aacgcaggac ttgttgtaaa agtccgggga ttgggaaaag tgaccgatca gtcaataaac
      181 gccggttcac caattgcaaa agggcaagtt gtaagccttg acttaaaaat gagtaattga
      241 aaaaattaga ggacatatta tacaaagtgc ggatcatttc tatacatggt gacagaaatg
      301 tggaagtcag cgacatcttt attgattcac ggaatatcga taacgattct cttttcattg
      361 ctgtaaaagg agaaaaattc gatggtcaca attttattca acaatcactt gttaaaggcg
      421 cacgagtgat cgtgtgtgaa gaactacctg actacctcga taacaccgtt acttatgttc
      481 aggttcaaaa ttcgcatgag gcatcggcat atatcgcaca caatttcttt gacgagcctt
      541 cacagaaaat gaagttggtc ggggttacag gcaccaacgg taagaccacc gtggcaacat
      601 tgctgtttaa attgttcagc aaccttggtt acaaatgcgg attggtgagc acagtgcaaa
      661 atcaaatagg cagtgaaatt attcctgcca cgcatacaac acccgatgct attagtctga
      721 attccctgtt acgacaaatg gttgatgcag gttgcagtca tgtcttcatg gaatgcagca
      781 gtcatgcaat tcatcagcac cgcataacag gcttgcgttt tgccggagga attttcacca
      841 acatcacgca tgaccatctt gattatcata aaacgtttga agaatacatc cgtgtaaaaa
      901 aatcattttt cgataatctt cccggggatg cttttgcctt gtcaaatctc gacgacaagc
      961 ggggtacagt gatgctgcaa aacacgcctg caagaaaata ttattacagc ttaaaaaacc
     1021 tcgctgattt taaagggaag atcctcgaaa acgtcttaac gggcctggtc atgcaggtga
     1081 acgaaaagga agtgcatttc cggctgatcg gtgaattcaa cgcatacaac ctgcttgcag
     1141 tttatggtgc cgggatgtgt ttgaatgaac agagcgaaaa agtattgctt atcctgagcg
     1201 gtctaagcgg cgctgaagga agatttgact atatcattag caagcaaaag atcattggca
     1261 tcgtcgatta cgctcacaca ccggatgcgt tggaaaatgt gctgggcacc ataaagcggt
     1321 tgaggcgagg cgatgaacaa gtgataactg tcgtcggttg cggtggtgac agggacaaaa
     1381 cgaagcggcc acttatggca cagatcgcaa cagagtttag taaccgcgcc attttcacca
     1441 gtgacaatcc ccgtagcgaa gacccgcttg aaattttaaa agatatggaa gcaggcctga
     1501 atagtgccgg taaacgaaaa tcgatctcta ttgcggatcg gcgtgaagcg ataaagacag
     1561 ccgtcagttt tgcgaatagc gaagacatca ttctgctggc gggcaaagga catgagaaat
     1621 atcaaatcat caaaaatgaa tcgctgcact ttgatgataa ggaagtgttg aaagaaatgt
     1681 ttgaactgtt agataaataa aggaagaaag atttaggaat taggaattag gagttgggaa
     1741 ttaggattta aggttgacga tatacgacaa tgctctacta cttttttaca tggttgcatg
     1801 agcgctacga cataagcggt gcgcgcctgt ttgaatacat ttctttcaga gctgcgatgg
     1861 ccgttttgtt ttcgttgatc atcgcgactg tgtatgggag aagggtcata aacctgcttc
     1921 gcaaaaatca aatcggggaa acagtgagag acctgggcct gcacggcgaa cagcaaaaga
     1981 aagggactcc gaccatgggc ggtattataa tactgctggc tataatagtt ccttcaatat
     2041 tatttgcgga cctcgataaa gtgtacatcc gcctgatgct gctgtgcact atatggctcg
     2101 gcgtgatcgg ttttctcgac gattatttca aactaagagc gaggaagaaa gcgattgccg
     2161 agggtaaaac gttcaccaaa aaagatgcag acggcttggc cggcgttaca aagatcatcg
     2221 gtcagatcgg ccttggaata atcataggtg ccacattgta tttcaacagc agcgtagtgg
     2281 tcgaaagaga attgatcggc gcgcaaacca cgcacccaac cctcggaaca ggcgaaaagg
     2341 ttgcgcgcga ttcaaacatc attatccgta acattaatgg cattgaacgc cggtttgcgg
     2401 aggttaaaac ccccatcact acaattccgt tcgtaaaaag tcacgagttc aactacagca
     2461 aacttatcag ttggatgagt ccaacggctg aaaaatatac gtggatcgtt tatatcatta
     2521 ttgtcacatt cattatcacc gcggtttcaa acggcgctaa catcaccgat ggccttgacg
     2581 gtcttgctgc cggtgtcagt gccattatcg gcgcaggtct cggcatcttc atttttgtga
     2641 gcggtaatta cgtgctcgcc gattatctca atattatgta cataccgaat ttgagtgagc
     2701 tggtgatatt catcggtgcg tttgtaggtg catgcattgg ttttctttgg tacaacacat
     2761 ttcctgcaca ggtatttatg ggcgacacag gcagcctcgc gctcggcggt atcattgctt
     2821 cactcgcgat cattgtgcgt aaagagttgt tgatccctat tttctgcggc atctttttga
     2881 tcgaaaatct gagcgtcgtt atacaggtaa gttatttcaa gtatacaaag agaaagtacg
     2941 gtgaagggcg acgaatattt ctgatgagtc cgttgcatca tcattatcaa aagaaaggat
     3001 atcacgaaaa taaaatatcg gtgcggttct ggatcgtgac gatactcctg gtagtagcgt
     3061 cgatcataac gctgaaaata agatgatgcg tttggtattt gaagtcttgc gatttgtttt
     3121 tttaaatcat gggcatgctt tataagctcg caatactggg tggtggtgaa agcggaattg
     3181 gcgctgctgt gttagctaaa cagcgggggt atgatgtttt cttaagtgat gccggctata
     3241 tcaatgaaaa atataaaagc gaattaagcg agcacaagat cgaatttgaa gaaggcggcc
     3301 attcgggcga aaaaattctc gcggcaaccg aagttgtgaa aagccccgga attcctgata
     3361 aaaatgagct ggtaagtatg attcgcgcca aagcgatccc ggtgatcagc gagatcgaac
     3421 ttgcgtaccg cttcaaggga agcagtaaga tcatagcgat tacgggaagc aatggcaaga
     3481 gcacaaccac agcgctgatc tatcatatat gtaaaaccgg cgaaatgaat tgtgcgctgg
     3541 taggtaatat cggttattca tttgcgaagc aggtggccga agatccaaag ccattatatg
     3601 ttgcagagat cagttctttc cagttggatg atataaaaga gtttagggca gatgtctcgg
     3661 tattgttaaa catcaccgaa gatcatcttg acaggtacga ttacagtttc gagaaatata
     3721 ttgacagcaa attccgcatt actgaaaacc aaacaatgga agattacttt atctacaatg
     3781 cggatgatga agtgatcacc aaaaaactgc aggcaactag attacacact aactcattac
     3841 cattttctat gaaacacgaa ctaactcacg gtggctggtt aaaaggcaag gacatgatgg
     3901 ttcgtctcca ggaggagcgg atcaatatga gcatttacga tttcgcgctg aaaggaaaac
     3961 ataaccagta taacaccatg gccgccacaa tagcggcagc gacgctcggc attaggaaag
     4021 aaaagatccg cgaagcggtg aagtctttcg aaagcctgga gcatcgaatg gaatttgtgg
     4081 ctacggtgcg cggtatagat tttataaacg acagcaaggc caccaatgtg aacagcacct
     4141 ggtacgcatt ggaaagtatg gagaaaccag ttgtattgat cctcggggga attgataaag
     4201 ggaatgacta tcaattgatc gaagacctcg tgaaggaaaa agtgaaggcg atcgtttgca
     4261 tgggactgga taacaaaaaa attcataaag catttgatag cctcgtgcca gtgatcgttg
     4321 acacggcaag tgctaaggat gcagttaaca cctcattccg gttgtcgacc aaaggcgacg
     4381 ttgtgttatt gagcccggca tgcgcaagtt tcgatttgtt caacaactat gaagacaggg
     4441 gaaggcaatt taaaaatgcg gtaagggatt tataggctct cacttgcacg gaacaaccct
     4501 taaaagaaaa agatatggta gacaaaactt ttaaaaatat tgaagacgtg agactcgcca
     4561 ccaactggcg tgaatggaag caaggcctcg ggcatgggtt aaggcatcgt gcccgtggtg
     4621 acaaatatat atggactgtt gttgtgttgc tcgccatcat ttccttgctt gctgtttaca
     4681 gcgcgaccgg ttcgctggca tataaatatt acgacggcaa caccgcagtt tacttgttca
     4741 aacaacttgc ctttatcgtc attggcatac tagtcatcta tttcatgcat cgggtgaatt
     4801 atactattta ctccagggtg tcgctcatac tataccttgt ctcgatcccg ctactgatct
     4861 acacgttatt tttcggtgtt gaagtgaacg atgcaagccg ctggataaaa ctgcctgtgc
     4921 tcaatcttac catacagacg agtgaccttg caaggctggc gctcttcatg tatttgtcga
     4981 ggcaactcag ccgaaagcaa aatgacatca aggattttaa aaaaggattt ttgcctctta
     5041 ttattccggt agcaattatt tgcatattga tattgcctgc aaatctttca actgcattat
     5101 taaccgggct tacctcgttg ctgttgatgt tcataggccg cgccagcgta aaacatatcc
     5161 tgttggtatt gatgatcgca gcaattccgg tgctgcttat cattgcgatc gctgtttcga
     5221 cttacgatgg aaataagact gatgacaacg acaacaagag cagcattagt tcaacactca
     5281 attcactcgg aagatttggc acatgggttc aacgaacaca ggattttatt tatgccaaag
     5341 acgctgagat cccttaccag gtgcagcagc agaatattgc catcgctaac ggtggaattc
     5401 tatttggctt aggccccggt aacagcaagc aaagaaatta tttgccgcag gcgtataacg
     5461 attcgatata cccgatcatc atagaagagt acggattgtt gggcgggtta ttcataatct
     5521 ttctttacat cgtctttctt tttcgttgca ttcgtgtatt tcgaaagtgc ccttacgcct
     5581 tcggcgcttt cctggcgctg ggattaagtt ttacgttggc aatccaggcg ctggcaaaca
     5641 tggcggtcgg cgtaaatctg atccccgtaa cgggggtaac actgccgttg gtaagcatgg
     5701 gcggaagttc atttctgttt acctgcgcgt cgatcggcat catattgagc gtagcaagaa
     5761 acatagagca gtctgaagca cggggagctg gtatgaatga gattgctgat gaaccaggtg
     5821 tgtcactgat tgaagttcgt gatacatcaa acgaaagact tgtcaagatg taattcgctt
     5881 cctggaaagg aagcggacct gaatgtaaga aataatgagt gaggatgaag taatagacga
     5941 tggtaccgat tctcccttta gacggcggag cgggcttcgt ctgatcatcg ccggtggcgg
     6001 aaccggcgga catatttttc cggccgttgc tattgccaat gctattaaag aaaaacaacc
     6061 gggaaccgaa atattgttcg tgggtgcaaa aggtaaaatg gaaatggaaa aagtgccgca
     6121 ggcaggttac aacattaagg gccttgacat tgcaggttac gaacgaagtt ctttgataaa
     6181 aaacatttgg ttgccattta agcttatcaa aagttttgga caggtaagga gcattgtcgg
     6241 aagttttcgt cccgatgcgg ccatcggtgt tggagggtat tccagtttcc cggtgctgaa
     6301 atatgcgcag cataagcata ttccaacttt catacacgag agcaattcgt ttgcaggaaa
     6361 aagtaatatc tggcttggca aaagcgctgc aaaaattttt gtgtccagta gcgggatgga
     6421 aaaatttttt cccgccgaca aaattgtgat caccggaaat cctgtccgaa aaaatattgt
     6481 ccagggcagc acaacccgga cggaagcttt gagctttttc gggctggacg atgccaaaaa
     6541 gaccatactc gttgtaggcg gtagcctggg agcaaagagt ataaacgagg taattgcttc
     6601 gcacattctc gagtttgatt cgctaggatt gcagcttatc tggcaaacag gaaaaacagc
     6661 cgcttctgct tatctggaaa gagcgaagcc gttgaagaat atttgggcag gtgatttcat
     6721 caacgaaatg aacaaggcgt atgctgctgc tgacatagtt atttcaagag cgggtgcaat
     6781 ggcagttgcg gaattgtgcg tcgtgaagaa gccggtgatc ttcgttccat ttccgtttgc
     6841 agcagaagac catcaaacaa tgaatgcaaa atatctagcc gaccgcgatg ctgctttgct
     6901 ggtgaaggat gaattcgcaa gcagtaagtt gtttgccgaa atggtaagcc ttgcgaagga
     6961 tgaagagaaa caggacaaac taaaaaacaa tatcgcagca tttgctgtga cgaatgctga
     7021 tgaaagaatt gcggaagaaa tactgagaag cctgccccgt cggtaaagga agagagaagt
     7081 tgtatgaaag aacaaaaaga cgtaaagcag atgatcagct cccccttagg ggatgggggc
     7141 ttcgttggcc tgtcaagcta tttcatcggc attggcggaa tcggcatgag tgccttggca
     7201 cggtatttta aaaatcgtgg cgcaagcgtt agcggctatg acagatccat tacgccgctt
     7261 acacgggaac tggaagccga gggaattgat gtgcattttg atgaagatct tgacgtaatc
     7321 ccaaaagatg cagacgttgt tgtatacacg cctgctgttc ctgaagacca taaggaactg
     7381 gtgtattacc gcgagaataa ttacaccgtt gtaaaacgca gcgacgttct gcaatggata
     7441 accgggcgct cgtataatat atgcgtaggg ggaacacacg gcaaaacgac cataaccacc
     7501 atgatagccc acgtgcttcg tgacagtggt tatggttgca atgcctttct tggcggtatc
     7561 tcagcaaatt atcaaaccaa tttttggccc gctgaaaatg atgttatggt cgtggaagca
     7621 gatgaatacg acagaagttt cttgaagttg acgccaaacg ttgcggtcat tactgccatg
     7681 gacccggacc atcttgatat ctatgggacg catgaagaag tgatgaatgc atttattgct
     7741 ttttcaaaaa aaataaaagc aggcggttgc cttgtttcga aatgtggcct tgaaagaagt
     7801 gaccagctga ctgctgatac acattttaca tacagctatg acagcgccga tgccgatgta
     7861 tatgcaacta acatagaagc tgtgcagggt tcgtataaat acgacgtgca aggcgaagaa
     7921 tggagtctgc ccaatgttga attacacatg ggtggttcgc acaatattga gaacagcgtt
     7981 gctgctatca cagtcgcaaa atatttaagg atcgatgatg ataaaataaa aaaagcaata
     8041 gcaaatttta aaggagtaaa acgaaggttt gaatatgtat tgaagaatga gaagcacatt
     8101 ttgatcgatg attatgcgca tcacccggct gagcttaaag ctttgctaag cggggttaaa
     8161 aatttgtatg aggaagaatg caccgtgata tttcaaccgc atttatatag ccgcacaaat
     8221 gacctcgcac cggaattcgc acgcagtcta gatctcgctg accaggtgat cttattacca
     8281 atttaccctg cgcgagaatt gccgatggaa ggagtgacca gcgaggtcat cttaaatgaa
     8341 atgacgttgc cacaaaagca gatccttgca aaaaatgcga tgcttgattg ggtaagatta
     8401 tataagccga agttattggt gatgtgcggc gccggtgaca ttgatgcttt ggtggacccg
     8461 gtgaaagaaa tattaaccga ataacaaata ggcaaaaaaa tctggcaggt ttttgaaagc
     8521 ctgtcagtct tgagaataaa aaattttgat gcagaagcta tgagcgcaaa aacaaaaata
     8581 aaaaccatcg gctggtccct gctcggactc tgttgtatgg ttttgctcgt tgctgccatg
     8641 aaatcaaaaa gcactgaagc ctgcaaggac atcgcgataa ccattgaagg agcgaccgag
     8701 catgtgtttg taaagaaagc tgatgtggtg aacgttttat cggaaaacaa tgtgcgcccg
     8761 ggcgaaaacc tgaaccacat tgatatcgga aaactcgaag ggcaattgga acaaaatgcc
     8821 tggatacaag atgccgagtt gttttttgac aacaagcagg ttttgcatgt gaagatcttt
     8881 gagagagaac ctatagcgag agtttttacg atgcaaggcg gttcgttcta catcgacagc
     8941 actgcgttgc gtttgccggt aactgaaaat gccgtcgcgc ggttgatcgt attcacatcg
     9001 ttcccttccg acaaaaaaat cctatcgcaa cccgacagcc ttgtgttggc cgacgtaaaa
     9061 aaaatagctc tctacataaa acaggacagc tttttaacgg cacaaacggc gcaggtaaat
     9121 attacacagc atggaacata tgagctcatt cctgtcgtcg gagaccagat aatacgaatt
     9181 ggcaatgctg acagcctcga cgaaaaattc accaagctgc gccttttcta tagccagatc
     9241 tggagcaaag tgggctttga aaaatactcg gtcatcgaca tacaatatca tgggcaggtg
     9301 gttgctgtaa ggcgaggcca gataaatggc gcaccagaca ccgcaaaggc ggtaatgcaa
     9361 ctcgcccagg cagaaaaaaa attgacccag gtgttgcggg atacgctata cgctgcaccg
     9421 atgaaacaag tgagtgttga tacggtgcgt gcacaaacag agaaaacagt tgccgggaaa
     9481 aaaagaagca agacaggtgc cgcaaatcat aaagacattg aaaaaaagaa ttcaccaggc
     9541 gataaaaaac caaaagcagt tatgccgggg aaagcgaaag gataaggtga gtttgaagtt
     9601 tgaggtttga ggtttgaggt tgctgtctgt tgaatacgaa tgcaaaaaat ttgattgaca
     9661 atataaaaaa ctcaataacg aactaagccc cgaatccctc cggcatttcg gagagaaaag
     9721 ggcgaggcaa taaacaacaa aacaactaaa acacgatcta tgaaccaaag ttcaaacggc
     9781 acaactgctc cggcgcaata cgatgacacc ggtgtgccta tcattgtagg ccttgacatt
     9841 ggcactacaa aaattgccgc aatagcggga cgaaaaaacg agtacggcaa actcgaaata
     9901 cttgggtttg gccgcgccga cagcaacggc gttcagcatg gacaggtgct gaatatcgat
     9961 caaacgatca aggctatcca gcaggcattg ctgaactgca acaaaagcaa tcctgatctc
    10021 gagatcaggg atgtttacgt tggcgttgct ggtcatcaca ttaaaagtct gcaaacgcgc
    10081 ggcgatatcg tccggcagga tcccgatacc gagatcgagc gcactgagat cgaccaactc
    10141 atcatgaacc agcgaaaaac atttatccct gccggtgacc agatcatcga tgtgataccg
    10201 caggattttc acgtcgacaa tcaccaaaac atcaaagacc ctgttggtta caatggtgta
    10261 aaagttggcg cgaattttca catcatcacg ggagacagaa acgcgatcag gaatatttat
    10321 cgcgctgttg accgcagtgg tttgaaaaca aaagacctgg tgcttcagcc actggcgtct
    10381 gcgagcgctg tgatgagtga aattgacatg gaagccggtg ttgcgattct tgacattggc
    10441 ggaggcacca gcgacctcgc tgttttttac gacggtattt tgaa
//
LOCUS       DASQJI010000187         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1860966,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000187 DASQJI010000000
VERSION     DASQJI010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1860966"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1216
                     /locus_tag="VEV83_05580"
     CDS             <1..1216
                     /locus_tag="VEV83_05580"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HYK44615.1"
                     /translation="HHPKISYKFLKEKIIRLKCCLYIFAKIPEMNIAVLGAGMVGRVM
                     ALDLAKEHTVTSIDINEDNLMLLEELNPSIKKIAANLKAYHLYNDLLAGFDLVVTAVP
                     GFMGFDTLKAVIECGKNVADISFFPENALGLDALAKEKSVTVITDCGVAPGMSNYIIG
                     RYNEEMKIDAFEVYVGGLPKVRKKPFEYKAPFSPVDVIEEYTRPARLMENGNIVVKPA
                     LTEREWMQFDELGTLEAFNTDGLRSLLYTMPHIKNQKEKTLRYPGHVDLIVALKETGF
                     FDTNKIVIDDHEISPLQFTSKILFNEWKLAAAEEELTVMMVLLIGENNTQAKTIEFSL
                     IDRYDPATKTSSMSRTTGYTCTASANLIAKQLFTEKGVFPPELVGKHKSCFDFVIKYL
                     KERNVNWTMKEY"
     gene            complement(1280..1729)
                     /locus_tag="VEV83_05585"
     CDS             complement(1280..1729)
                     /locus_tag="VEV83_05585"
                     /inference="COORDINATES: protein motif:HMM:NF019238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK44616.1"
                     /translation="MKNIFDVDASTEILQRLELLQPASRALWGKMTVSQMMAHCIAPM
                     KVSLGETTPKRTLMGLLFGRMGRKMVLKDEPFKQGLPTDPSFVIKHEPDFDSKKQELR
                     ETIKKLLAADKNAMVARPHPFFGKMTVEEWGKLGYKHLDHHFRQFGV"
     gene            1847..>2053
                     /locus_tag="VEV83_05590"
     CDS             1847..>2053
                     /locus_tag="VEV83_05590"
                     /inference="COORDINATES: protein motif:HMM:NF036807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK44617.1"
                     /translation="MSIQIIGTGVGRTGTHSLKLALEQLGFGKCYHMIELFIHPEDLV
                     YFEKAERGEAVDWDKLFEGYNSAVD"
BASE COUNT          592 a          422 c          461 g          578 t
ORIGIN      
        1 ccatcatcca aaaatcagct ataaatttct caaagaaaaa attattcgcc ttaagtgctg
       61 tttgtacatc tttgcaaaaa ttccggaaat gaacattgca gttttaggcg caggtatggt
      121 tggcagggta atggcccttg atctcgcgaa agaacacacg gttacttcga tcgatatcaa
      181 tgaagataat ttgatgttgc tggaagagct gaatccatct atcaaaaaga tcgcggcgaa
      241 tttgaaagca taccatttat acaacgacct gttggcggga tttgacctgg ttgttactgc
      301 cgtaccaggt tttatgggat ttgatacttt aaaggcagtt attgaatgtg gaaagaacgt
      361 tgccgatatt tctttcttcc cggaaaatgc cctcgggctt gatgctctcg caaaggaaaa
      421 aagtgtgacc gtcattaccg actgcggtgt tgctcccggg atgagcaatt atattatcgg
      481 tcgatataac gaagagatga agatcgacgc ttttgaggtg tatgtgggag gcttaccaaa
      541 ggttagaaaa aaaccgtttg agtacaaagc gccgttctct cccgttgatg ttatcgagga
      601 atatacacgt cccgcgcgtt taatggaaaa tggaaacatc gtcgtaaagc ctgctctcac
      661 cgaaagagag tggatgcagt tcgatgaact cgggacgctg gaggcattca acactgatgg
      721 actgcgttct ttgttataca cgatgccgca tattaaaaat caaaaagaaa aaacgcttcg
      781 ttatccaggg catgttgatc taatagttgc tctgaaggaa accggatttt ttgatactaa
      841 taaaattgtg atcgacgacc acgaaatttc gccgctccaa ttcacttcca aaattttatt
      901 taatgaatgg aaacttgcag cggcagaaga agagcttact gttatgatgg ttttgctcat
      961 cggcgagaat aatacacaag ctaaaacaat tgaatttagc ctcatcgatc gttatgatcc
     1021 agctacaaaa acttcttcaa tgagccggac aacaggctac acgtgcacag cttctgcgaa
     1081 ccttattgcg aaacaattat ttacagaaaa aggtgtgttt cccccggagc ttgtaggaaa
     1141 gcataaatca tgttttgact ttgtcatcaa atatcttaaa gaaagaaacg tgaactggac
     1201 gatgaaggag tattaaattg agctttgaag tttgaggttc gaggttacta agttgaccat
     1261 ctgccttcac aattcaccat cagaccccga actgccggaa gtgatgatcc aggtgtttgt
     1321 agcctaactt gccccattcc tccacggtca ttttgccaaa gaacggatgg ggtctcgcaa
     1381 ccatcgcgtt tttgtctgct gccaaaagtt tttttattgt ttccctgagc tcctgctttt
     1441 ttgaatcgaa gtccggctca tgtttgatca caaagctcgg gtcggttgga aggccttgtt
     1501 taaaaggctc gtctttcaac accatctttc tgcccattct tccgaatagc aaacccatca
     1561 atgtccgttt cggcgttgtt tctcccaacg aaactttcat cggtgcaatg caatgcgcca
     1621 tcatttgaga aacggtcatc ttaccccaaa gggctctcga agctggttgt aagagctcaa
     1681 gacgctgcag gatttcggtc gatgcatcaa cgtcgaaaat atttttcatg caagcagttt
     1741 aatcgaaggt agcgatttcc cgtagcaggt cggttggcac tcagtgagga gtttcttaga
     1801 aaaaagtatg ccgggcaaac gctactttta tagaaaatat ttttttatga gtatccagat
     1861 catcggtacc ggcgtcggca gaacaggtac ccattcactc aaacttgcgc tagaacaatt
     1921 agggttcgga aaatgttacc acatgattga actctttata cacccggaag acctcgtgta
     1981 ttttgagaaa gcggaaagag gagaagcagt tgattgggat aaattgtttg aaggatataa
     2041 ctctgccgtc gat
//
LOCUS       DASQJI010000188         3726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2474902,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000188 DASQJI010000000
VERSION     DASQJI010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474902"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..997
                     /locus_tag="VEV83_05595"
     CDS             <1..997
                     /locus_tag="VEV83_05595"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK44618.1"
                     /translation="RNLTQLDAAPRWAVWPGHGVVTFGKSLEEAKIVADISEHTIKAI
                     QQAEKLGGWRSLSQKDLFGMEYWELEQAKLKKSASTKNFQGKIALVTGAASGIGKACG
                     IALAKEGAVVVAVDINPAIEKMQTPGVFGITCDVRNKTALNNAVENTIKQFGGLDLLI
                     SNAGIFSSAQSIENIDDKIWEQSLSLNLTSHQQLLQACIPYLECGISPSVVIIGSKNV
                     PAPGPGAASYSVAKAGLTQLARVAAFELGKKGIRVNVIHPNAVFDTGVWTDKVLKSRA
                     AQYGLSVHAYKTNNVLKTEITSADVAMAALQFLGPAFSKTTGAQIPVDGGNDRVI"
     gene            complement(1043..2584)
                     /locus_tag="VEV83_05600"
     CDS             complement(1043..2584)
                     /locus_tag="VEV83_05600"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HYK44619.1"
                     /translation="MNPKIKTLRKKIEEGKAGGGEKRIAAQHHKGKLTARERIELLMD
                     PGSFEEIGALVIHRTIDFGMQKQHYYGDGVITGYGTVNGRLVYVYAQDFTVFGGALSE
                     THAEKICKIMDLAMKTGAPMIGLNDSGGARIQEGVRSLGGYADIFYRNVQSSGVIPQI
                     SAIMGPCAGGAVYSPAMTDFTIMVENTSYMFVTGPNVVKTVTNEAVTSEQLGGASTHS
                     IKSGVTHLTAANDMDCIAQVKKLLGYMPQNCEDVVPKLPYTLTDEVREELENIVPDSP
                     NQPYDIRAVIRGICDTDTFFEVHREFAHNIVVGFARLAGRSIGIVANQPMSLAGVLDI
                     NSSKKGARFTRFCDCFNIPLLVLVDVPGFLPGTDQEWNGIITNGAKLLYAFSEATVPR
                     VTVITRKAYGGAYDVMNSKHIGADMNFAWPSAEIAVMGAKGASEIIFKKEISEAADPA
                     QKLREKETEYAEKFATPYLAAERGFIDEVIEPKETRRKLIKAFAMLENKVAKRPRKKH
                     GNIPL"
     gene            complement(2607..>3726)
                     /locus_tag="VEV83_05605"
     CDS             complement(2607..>3726)
                     /locus_tag="VEV83_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HYK44620.1"
                     /translation="ESAKKYNIPMVPGIQQAITDIQLAKDIATEVGYPVLIKASAGGG
                     GKGMRIVEKEADVASQMERAISEATSSFGDGSVFIEKYVSSPRHIEIQVLADKFGNTI
                     HLFERECSIQRRHQKVVEESPSSILTPELRRKMGDAAVMVAKSCNYTNAGTVEFLLDD
                     KMNFYFLEMNTRLQVEHPVTEMITGIDLVEEQIKIARGEKLSFAQDDIAIDGHAIELR
                     VYAEDPLNNFLPSIGTLHKYVRPGGENVRVDDGYEEGMTIPVYYDPMIAKLITHGKNR
                     IEAIQKMLQAIKHYKIEGVSTTLPFGTFVFEHDAFISGNFDTHFVKNYYTPEKIREKQ
                     KQNAEVASLIALKYWFEKQKVLNPVENRSTSWKRRLAH"
BASE COUNT          919 a          905 c          826 g         1076 t
ORIGIN      
        1 ccgaaacctc acgcaacttg atgctgcccc gcgatgggca gtgtggcccg ggcatggggt
       61 cgttacattt ggtaagagtt tggaggaagc gaagatcgtt gccgatatca gcgaacatac
      121 tatcaaagcg atccagcagg cggaaaaact cggaggctgg cgatcccttt cccaaaaaga
      181 tcttttcgga atggagtatt gggagctcga acaggcgaag ttgaaaaaat ctgcgtcaac
      241 aaaaaatttc cagggaaaaa ttgcattggt aacgggcgcc gcaagtggca tcggcaaagc
      301 atgtgggatt gcacttgcaa aggaaggtgc tgttgttgtt gcagtcgaca tcaaccccgc
      361 aattgaaaag atgcagacgc cgggagtgtt tggaataacg tgtgatgtaa ggaataaaac
      421 agcattgaat aatgcagttg agaacacgat caaacagttt ggtggtttgg atctgctgat
      481 cagtaatgct ggtatttttt cttccgcgca aagcatcgaa aacattgatg acaaaatatg
      541 ggaacagagc ctgtcattaa atcttacgag tcatcaacag ctactacaag cctgcattcc
      601 gtatcttgaa tgtggaataa gcccttctgt tgtgatcatt ggttcaaaaa atgttcctgc
      661 cccgggccca ggcgctgcga gttactcggt ggcgaaagcg ggtcttacgc aactggcaag
      721 agtggcggcg ttcgaacttg gcaaaaaagg aattcgtgtg aacgtgattc atccaaacgc
      781 ggtgttcgac acaggagttt ggaccgataa agtactgaag tctcgcgccg cacaatacgg
      841 cctttcagtg cacgcctata aaaccaataa tgttttaaaa acagagataa catcagccga
      901 tgttgcaatg gcggctcttc aattcctcgg tcctgcattt tccaaaacta ccggagcgca
      961 gatacctgtt gatggtggaa acgacagggt aatttaaatt caatcaactt acaagtaagg
     1021 taacaaaacg ttttcacgtc ggttataacg gaatatttcc gtgctttttc ctggggcgtt
     1081 ttgcgacttt attttcaagc atcgcgaatg ctttgatcag ttttctcctg gtttcttttg
     1141 gctcgatcac ttcatcaatg aatccgcgct cggcagcgag ataaggcgtt gcaaattttt
     1201 ccgcatactc cgtttctttc tcgcgcaatt tttgagcggg atctgccgcc tcggaaattt
     1261 cttttttgaa gatgatctcg ctcgcaccct tcgcgcccat tacagctatc tctgccgatg
     1321 gccacgcaaa gttcatatca gcaccaatgt gcttggagtt catcacatcg taagcgcctc
     1381 catatgcttt cctcgtgatc acagtaacgc gtggtactgt tgcttcgctg aacgcatata
     1441 aaagtttagc accgttcgtg atgatgccgt tccattcctg gtcagtgccg ggaaggaacc
     1501 cgggtacatc aaccaacact aacaacggaa tattgaaaca atcacaaaac ctcgtgaacc
     1561 ttgcgccttt ttttgaactg ttgatatcaa gcactcccgc aagactcatc ggctgattgg
     1621 caacaatacc aatgcttctt cctgcaaggc gcgcaaagcc aacgacaata ttgtgcgcga
     1681 attcccggtg cacttcaaaa aatgtatctg tatcgcaaat gcctcttatt actgcacgta
     1741 tatcgtaggg ttgattcgga ctatccggta ctatgttctc caattcttcg cgtacttcat
     1801 cggtcaatgt ataaggtaat ttgggaacaa cgtcttcgca gttctgtggc atgtaaccca
     1861 ataatttttt cacctgggca atacaatcca tgtcgtttgc tgcagtgaga tgagtaacac
     1921 ctgattttat tgagtgcgtg gatgctccgc ccaactgttc ggaagttact gcctcatttg
     1981 tcaccgtttt cacaacattc ggcccggtga caaacatgta gctcgtgttc tccaccatga
     2041 tcgtaaagtc tgtcatggca ggtgagtaaa ctgctccgcc cgcacatggc cccatgatcg
     2101 cagagatttg cggtataact ccggatgact gcacattccg ataaaaaata tccgcataac
     2161 caccgagtga tctcacacct tcctgtatcc ttgcaccgcc actgtcgttc aagccgatca
     2221 taggcgcgcc ggtcttcatc gcgaggtcca tgatcttgca aatcttttcc gcatgagtct
     2281 ccgaaagcgc tccgccaaac accgtaaagt cctgcgcata cacatacacg agtctgccgt
     2341 tcactgttcc gtaacctgtg atcacaccat caccatagta atgttgtttt tgcatcccaa
     2401 aatcaatcgt gcggtggatc actaacgcgc cgatctcttc aaatgaaccg gggtccatca
     2461 acaattctat gcgctcgcgc gcagtaagtt tgcctttgtg gtgttgggca gcaattcttt
     2521 tttcacctcc accggcttta ccttcttcga tcttctttct taacgttttt atttttggat
     2581 tcatgatgtg tttcacaatt cggtgattaa tgcgcaagcc tgcgcttcca gctcgtcgat
     2641 ctattttcga ccgggtttaa aactttctgt ttttcgaacc agtatttcag cgcgatcagt
     2701 gaagcgactt ccgcattttg tttttgtttt tcgcggatct tttcaggcgt gtaataattt
     2761 tttacaaaat gcgtatcaaa atttccactg atgaatgcat catgttcaaa aacaaaagtc
     2821 ccgaacggca gtgtggtaga aactccttcg attttatagt gtttgatcgc ttgcagcatc
     2881 ttttgaattg cttcaattct gttcttccca tgggtgatga gttttgcgat catcgggtcg
     2941 taataaaccg gaatcgtcat cccttcttca taaccatcgt ccactcttac attttctcca
     3001 ccaggcctta catatttatg tagcgtgccg atggacggca ggaaattatt cagcgggtct
     3061 tccgcataaa cgcgaagttc gattgcatgg ccatcgattg cgatatcatc ctgggcgaag
     3121 cttagttttt caccgcgggc aatttttatt tgctcttcaa ccaggtcgat gccggtgatc
     3181 atttccgtta ccgggtgttc tacctgcaaa cgcgtattca tctcgagaaa atagaaattc
     3241 atcttatcat ccagcaggaa ctcaaccgta cctgcgtttg tgtaattgca tgatttggca
     3301 accattactg ctgcatcgcc catttttctt cttagctcag gcgttaaaat ggatgacggc
     3361 gattcttcca cgactttttg gtgacggcgt tgaatgctgc attctctttc aaagaggtga
     3421 attgtatttc caaatttatc agccagcacc tggatctcga tgtgcctcgg cgaggagaca
     3481 tatttctcta tgaacacaga accgtcgcca aacgatgaag tagcttcgct gattgcacgc
     3541 tccatttgcg atgcgacatc tgcttctttt tcgacgatcc tcataccctt gccgccgcct
     3601 cctgcagagg ctttaatgag gacgggataa ccaacttctg ttgcaatatc ttttgccagt
     3661 tgtatgtcgg tgatggcttg ctgtatcccc ggcaccatgg gaatgttata ttttttggca
     3721 ctttct
//
LOCUS       DASQJI010000189        11809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1861037,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000189 DASQJI010000000
VERSION     DASQJI010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11809
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861037"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VEV83_05610"
     CDS             complement(<1..278)
                     /locus_tag="VEV83_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44621.1"
                     /translation="MSICSIRRFTIADWLLQIADLGFVISVSDFLGFIFSVVGPCFLS
                     LCFISLVLVLWFFFLGSCSLVLLPWFLFPGSYFLFPISYFLFLGSFPLL"
     gene            complement(527..4270)
                     /locus_tag="VEV83_05615"
     CDS             complement(527..4270)
                     /locus_tag="VEV83_05615"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYK44622.1"
                     /translation="MKKFFSVRFLFIAAIIALCTFSFLSYKRMELLMRSSRMVTHTTE
                     VKLELQKLISAFKDAEAGHRGYLLTHDKRFLESFETTLKEYRAHINSLKQLVADNASE
                     QQNLSQVQALATRRVDYMFTMLEIDRIHSPTAEQMLGGKKIMDSLQNAINKMADVENR
                     LLNVRNAELARQSVITPVWLLFFTFTSLAILIITFLAITKQIRARRKTEASQKELQQI
                     FRQAPVTIVVYAGKDLIVEVANNFALEMWGKKEEDVIGKPFFEISPELREKQEPLLRQ
                     ILQTGNAFIGKEFRAQYTRGGQSHSGYFDFVYQPRYNDAKEITGIIAIGTEVTHSVIA
                     RKKIEESEEKFRTLATEAPLFVWLTDENLQTTFLNKNGLGYFNLAPPIDFAQLSWKKF
                     IHPDDLDRVLYIMKEAAQIHKSYTLEMRLKNGATGAYRWFLDKGAPRFENEKFIGFIG
                     TTFDIHDLKLSQEKLRQSEERYRLLSQTLEETVQQRTRELRERNVFTQTLLDSSVDLI
                     FVVDKDLRYMSLNKKAREALQLIYPGEVTGCKIDEVTPGVQQHPAFADLMQAFAGNVV
                     HRSEYRSSVGGRFFDLNYVPIRNEKEIYAVMTLMRDVTENVRTKQEIEKVNQHLQQRN
                     EFIETIIDASQEMIAVWDKDLRLLTVNKTIEQLLGADKEQLTGKGLFELYPNAKESKP
                     HSDLLQALAGETVKNEPFYSSITDKYVQNYITPLKDNDGNIYAALAIAHDVTDIKKAE
                     EELKKSQQHFSQLFNVSPVAMSLSHLDDGEVVNVNEAWEKMFQFNRQEVIGKNASELK
                     LADPIQRTEKLNRIKHNGGSAHGMEMKYHLPNGKVIYAFVSVESVELDGVPCLLAAYF
                     DISERKLAEEKIKKANQLLEDKNAEFLEAQRLAHIGSWEWNIAENKISWTDELYRIFG
                     VSPDNFESTFENYIALLHPDDRELATNTVERAYQTHEPFDFMHRTIRHDGSTRILHGR
                     GEVVLNEKQEPIRMLGTAQDVTELKQYEAEIEKKNTELENMNKELSSFAYVASHDLQE
                     PLRKIQVLSKRILEKEISGLSADGRECFRRMENAANRMQQLINDLLSYSRTAVRETHL
                     EPTDLNNLLQQVKMDLNEKLTTTSATIETGRLPELNVVPFQFKQLFTNLINNSIKFSR
                     PGVAPHIKIESSITNKLNGAVDAQKKYYHIRITDNGIGFENEYKDQIFGLFSRLHGRA
                     EYEGTGIGLSICKRIIENHNGTIDAEGEPGKGATFNIYLPVER"
     gene            complement(4474..7062)
                     /locus_tag="VEV83_05620"
     CDS             complement(4474..7062)
                     /locus_tag="VEV83_05620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44623.1"
                     /translation="MLNGNSFSRGSLKYFRRIIFYYLLLNGYANAQQSPLQDTTKFRT
                     VSAGAEYEKSSWHQFLWGSNYRKEWTTPVTVPVILLDTAKGGLKPYEAGGGHQTKSLH
                     LKTANEKEYTLRSVNKTLAKVLPEILWGTFAEKQVNDEVSMSHPYAASAVPFMAERAN
                     IYHTNPRYVYLPKQSALDTFNNTHGDNLYLFEQKVAGNWKEADNLGNFENFYSTEEVL
                     KKIYDNNRVSVDQQTFIKERIFDWFIGDWDRHEDQWEWGERKNGDAITYVPVPQDRDQ
                     AFSKHNGLLLNFGMSAGGLFYMQPFDDDLKDVRTFTYEERNLDRFFTNEMTLDDWQNA
                     AKELQRTLTDEVITESIRQLPPEVFSISGEELISKLRSRRGHLVEWATTYYRFLAEQV
                     QVIGSKQKEYFEVSRSNNGETSIKVYRLADNGNKIDSPFFERTFNPAETKEVRLFGLG
                     AEDVYKVEGDVKRGMVVRIIGGDSKDLITDSSGGTTHIYDDKNNVIEKGDRTKLHLSS
                     DTSVHDFKYDWYRYDKKGIVPYPFYSNEDHVYIGLGYFATNFAWRKEPFASRQLIDVH
                     YSISEKAFSVIYNSLIPHLIGNWDLSLKANYDAIRWTHFFGLGNETQFTDGDIYYYTT
                     RTREWFAQPAVIRRFGKNTVTISGFLKGSKVIDDTSRYLSKTFAPPDADFFHWKNFGG
                     AEVNYSLEQINDSILPTRGIVFSANALGARNLESSQGYMKYSTNLQLYIPLVSKFYLR
                     TQAGAITVTGHPEFYQYASIGGQTLRGFRRDRFWGKTAFYNTNEVRFISNVKSYIFNG
                     KAGLLAFFDNGRVWMPGENSETWHTGYGGGLILAPFNFISAYFTYGISKDERLWQVNV
                     RFNKLF"
     gene            complement(7124..7705)
                     /locus_tag="VEV83_05625"
     CDS             complement(7124..7705)
                     /locus_tag="VEV83_05625"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HYK44624.1"
                     /translation="MKKSLITWCILVLFSCNQIQNKRGNSKDSSRPTVIKPGPPIDSS
                     TSNFINTNQITPEQIVSFAETLIGIPYKYASTDPSQGFDCSGFITYVFNHFHIDVPRS
                     SVQFTNVPHEVPLSDAKPGDLILFTGTDSTVRVVGHMGIIVSHNGNETLFIHSSSGKA
                     WGVTITALNDYYMGRFVKLVRVFPQNDPEGKNA"
     gene            complement(7766..8188)
                     /locus_tag="VEV83_05630"
     CDS             complement(7766..8188)
                     /locus_tag="VEV83_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44625.1"
                     /translation="MCRSRSILITLLLLFGMCCTKKIVAQGQKFFDRDSSLITGNWTG
                     SSLCQAKSSSCQDETVQYNILEGDSGIYRVTMSKIVKGKSNFMGTLDCTYDESTKTLS
                     SNENGKIWQFTMKHATIDGILIWRAQLYRKIHLERNEH"
     gene            8312..10288
                     /locus_tag="VEV83_05635"
     CDS             8312..10288
                     /locus_tag="VEV83_05635"
                     /inference="COORDINATES: protein motif:HMM:NF022039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HYK44626.1"
                     /translation="MRTIFCLAYLLSFFAAHSQKVVHLTSPNGNILFSFDIEKNRPTY
                     NVSYRGKRIIDNSSVGVSFADGEFSDGVVALKAVYEDSTEDYDLVVGKTSHVHDTYKQ
                     VTIPLQQTSTKRKINIEVRAFNDGVAFRYEFPEQDNWRSFDLTDENTTFNLDGNTIVH
                     GLLLPNYTSSHEGYYTTTSMKDLRDDTLMDLPALFELPDHTFLAITEAALLDYAGMYL
                     SKYDGELVSKLSPLPPPAGDGTIKVKATTPHRSPWRVLMISDRIGDLIESNIITDLNE
                     PCKMKDVSWIKPGKTTFPWWNGNVTPDTLNAPGNNFVTAQYYIDFCARNNIEYHSVVE
                     YGLHQWYMDDGVSFQPGPHADVTTPVPGLNMKEICDYAAGKGVGIRVWVHFYALYPKL
                     DTAFALFEKWGLKGMMVDFMDRDDQEMVNMQTEILQKASAHHLHIQFHGAYKPTGLSR
                     TYPNEFTREGTLNYEADKWTDGGLSPDHDINIPFTRMLAGSTDYHLGGFRAVPPEKFK
                     TPHYTRPLVLGTRCHMLAMYVVLENYLQMVCDDPGAYEGEPGFDFIKEIPTTWDETKV
                     LNAQVGKYITIARRKNNDWYVGTIANHEARQLAIPLNILPGGNYSAEIYTDANDVSKD
                     PNHLNKETRRVTNKDVINVQLAGGGGMVMRITKD"
     gene            complement(10658..11794)
                     /gene="bshA"
                     /locus_tag="VEV83_05640"
     CDS             complement(10658..11794)
                     /gene="bshA"
                     /locus_tag="VEV83_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HYK44627.1"
                     /translation="MRIGIVCYPTYGGSGVLATELGKALADKGHQVHFITYQQPVRLN
                     IFSANIFYHEVSVPTYPLFDYPPYELALASTMVDVILNHDLDLLHVHYAIPHASAAYM
                     AKQILLKTGRSIPVITTLHGTDITLVGRDKTYEPVVTFSINESDAITAVSENLKEETY
                     RSFAITKDIQVIENFVDNSRYNKKPIDAFRKVIAPNNEKIIIHASNFRKVKRVEDVIR
                     IFANVHEKLPAKLLLVGDGPERRSMEDLGRQLQVQDDVRFLGKQEQIEEILLVCDVFL
                     LPSEYESFGLAAMEAMAASVPVISSDAGGLTEININGETGYTAAVGDIETMSACAINL
                     LSNDELLAQFRKSAKAQALKYDLHNIVPQYEKLYSRFCRMVCEA"
BASE COUNT         3111 a         2694 c         2594 g         3410 t
ORIGIN      
        1 agtaagggga aagaaccaag aaataagaaa taggaaatag gaaataggaa ataagaacca
       61 gggaacaaga accaaggaag aagaaccaaa gaacaagaac caaggaagaa gaaccaaaga
      121 acaagaacca aagaaataaa acaaagagac aaaaaacaag gaccaacaac cgaaaaaata
      181 aaacccaaaa aatctgaaac agaaatcaca aatcctaaat ccgcaatctg caatagccaa
      241 tctgcaattg taaatctcct gattgaacaa atgctcaatc aacgtgattg ggcaatttat
      301 ccttacgttc gggcacgacg gtcaaaatgg taaatcgtaa atcgtaaatc tgaaatctgc
      361 aatcgccaat ctgcaattgt aaatctcctg attagactcg atcaatgtga ttctgcaatt
      421 tatctatgct tacgttcggg cacgatggtc aaaattgtaa atcgtaaatt gtaaatcgta
      481 aattgtaaat ctgaaatctg caatcgccaa tctgcaatcc aattcctcac cgttccaccg
      541 gtaaataaat attgaacgtt gcgcctttgc caggttcgcc ttcggcatca atggtgccgt
      601 tatgattttc gattatcctt ttgcatatag ataggcctat acccgttccc tcgtattcag
      661 cgcgtccatg gagacgggag aacaaaccaa agatctggtc tttgtactcg ttttcgaaac
      721 caatgccgtt atcggttatg cgaatgtggt aatatttttt ttgtgcatct actgcgccgt
      781 tcagtttgtt tgtaatactg ctttcaattt ttatatgcgg tgccacgccg ggcctggaga
      841 actttatcga attattgatg aggttcgtaa aaagctgttt gaactgaaaa ggcaccacat
      901 tcaattcagg caacctacct gtttcaatag ttgccgatgt cgtcgtaagc ttttcgttca
      961 ggtccatttt tacctgttgt aataaattgt tgaggtctgt tggctcgagg tgcgtttccc
     1021 tcacggccgt ccgtgaataa gaaagcaggt cgttgatcag ttgttgcatc cggttcgccg
     1081 cattctccat tcttctgaag cactcacgac catcggccga caaaccgctg atctcttttt
     1141 caaggatccg tttagaaaga acctggatct tgcggagagg ttcctgcagg tcatggctcg
     1201 ccacgtatgc gaatgaagac aactccttgt tcatattttc gagttcagta ttcttctttt
     1261 cgatttctgc ttcgtactgt tttaattcag taacgtcttg tgcagtgccc aacattctta
     1321 tcggttcctg cttttcatta agcacaacct cgcctcttcc atggagtatt cttgtgcttc
     1381 cgtcatgccg aatcgttcta tgcataaaat cgaatggctc atgtgtttga tacgcgcgct
     1441 ccaccgtgtt cgttgccagt tcgcggtcgt cgggatgaag cagggcgata taattttcaa
     1501 acgtcgattc gaagttgtcg gggcttactc caaatatgcg gtagagttca tctgtccagg
     1561 agatcttatt ctcggcaata ttccattccc aactgccaat atgagcaaga cgctgtgcct
     1621 cgagaaattc ggcatttttg tcttcaagta actggttagc cttctttatc ttttcttcag
     1681 caagttttcg ctcgctgatg tcaaagtaag ctgcaagcaa acatggcacg ccgtccaact
     1741 ctaccgattc aacggaaaca aatgcataaa taacttttcc attcggaaga tgatatttca
     1801 tctccattcc atgagcgctt ccgccgttgt gtttgattcg attgagtttt tcggtgcgct
     1861 gaatcggatc cgctaactta agttcagaag cgtttttgcc gatcacctct tgccggttaa
     1921 attgaaacat tttttcccac gcctcgttta cgttcacaac ctcgccatca tcgagatgcg
     1981 ataatgacat cgccaccggg ctcacattga aaagctgcga aaaatgttgc tgcgactttt
     2041 tcagttcctc ctctgctttt tttatgtcag ttacatcgtg cgctatcgca agggctgcat
     2101 aaatatttcc gtcattgtct ttcagtgggg tgatatagtt ctgaacatac ttgtcggtga
     2161 tcgaagaata gaacggttca ttttttacgg tttcgccagc caatgcctgc agcaggtccg
     2221 aatgcggttt gctttctttc gcattgggat atagttcgaa taatccctta ccggttagct
     2281 gctctttatc agcaccgagc agttgttcaa tagttttatt aactgttaaa agccttagat
     2341 ctttgtccca aacagcgatc atttcctgcg acgcatcaat gatcgtctca ataaactcat
     2401 tccgttgttg caggtgttga ttaaccttct cgatctcctg tttcgtcctt acgttttcag
     2461 taacatcgcg catcagcgtc ataactgcat agatctcttt ttcgttgcgg atcggaacgt
     2521 agttgagatc aaaaaatctt ccgcctacac tcgaacggta ttcggaccgg tgaacaacgt
     2581 tacccgcaaa cgcttgcatc aggtcggcaa aggccggatg ttgctgtaca cccggcgtca
     2641 cttcatcaat tttgcagccg gtgacttccc ctggataaat taactgcagt gcttcgcgtg
     2701 cttttttatt caacgacata taccggaggt ccttgtcaac tacaaatatc aggtcgaccg
     2761 atgaatcaag taatgtttgt gtgaacacat tgcgttcccg cagttcgcgt gttcgctgtt
     2821 gaacagtctc ttcaagtgtt tgagaaagga ggcgatatcg ttcttcactc tgtcttagct
     2881 tttcctgtga taacttcaaa tcatggatat caaaagttgt cccgataaaa ccaatgaact
     2941 tttcattttc aaatctcggt gcccccttat cgaggaacca cctgtaagca ccggtggcgc
     3001 cgttctttaa gcgcatctcg agcgtgtacg acttatgtat ttgagccgcc tctttcataa
     3061 tgtataacac ccggtcgagg tcatcggggt gaataaattt tttccatgac aattgtgcga
     3121 agtcgatagg cggagccagg ttgaagtacc cgagcccatt tttgttgagg aatgtggttt
     3181 gaagattttc atctgtgagc caaacaaata atggtgcttc tgttgcgagc gtccgaaatt
     3241 tttcttcgct ttcttcaatt ttcttccggg cgatgacaga atgtgtgact tcagtgccga
     3301 tggcgataat gccggtgatc tccttagcgt cattgtatct cggctgataa acaaaatcaa
     3361 aataaccgga atgggactgc ccgccccttg tgtattgtgc acgaaattct tttccaataa
     3421 atgcattgcc tgtctgcagg atctgtctta gcagaggttc ttgcttctct cttaattcgg
     3481 gcgatatttc aaagaacggt ttccctatca cgtcctcttc ttttttgccc cacatctcca
     3541 aagcgaaatt gttggcgacc tcaacaatga gatctttgcc ggcgtagacc acgatcgtta
     3601 ccggcgcctg cctgaatatt tgttgaagtt ctttttggct cgcctctgtt tttctgcgcg
     3661 ctcttatctg cttcgtgatc gcaagaaatg ttattatcag aatggcaagc gaggtgaaag
     3721 tgaaaaaaag aagccacaca ggcgtgatca cagactgcct cgcaagttct gcgtttcgca
     3781 catttaataa ccggttttct acgtcggcca ttttgttgat ggcattttgg aggctatcca
     3841 tgatcttctt cccgcccaac atttgttctg cagtcggact gtggatccgg tcaatctcga
     3901 gcatcgtgaa catataatct acgcgccgcg tggccagcgc ttgcacctgt gaaaggttct
     3961 gctgctcgct tgcattatcg gccactagct gctttaatga gttgatgtga gcacggtatt
     4021 cttttaaggt tgtctcgaat gattccagga aacgcttatc gtgcgttagc aagtagccgc
     4081 gatgacctgc ttccgcatct ttaaaggcgc ttattaattt ctgcagttca agcttgacct
     4141 ccgtggtgtg cgtcaccatc cttgaagatc tcatcagcag ttccatgcgt ttataggaaa
     4201 ggaaagaaaa agtgcacaga gcgataatag cagcaataaa cagaaagcgt acgctaaaaa
     4261 actttttcat ttaacagact tggatttgca tgcgcgaaaa atcgcgattg atacggcgat
     4321 ttgactggtc gaatttcggc gattccattt gaatagcgat tgtaaaagta ctaaaggaaa
     4381 taagaaaaaa tgcgtccggc gaaggttgtt tcgtccggta ggaaattgag tcggctgcgg
     4441 cggaaatatt gtacttccat tccgtcgata acatcaaaac aatttgttga aacgcacatt
     4501 aacctgccaa agtctttcat ccttcgatat gccgtaagtg aaataggccg agataaaatt
     4561 aaatggggcg agaataagtc caccgccata acctgtgtgc catgtttctg aattttcccc
     4621 cggcatccat acgcggccat tgtcgaagaa agcgagcaat cctgctttcc cgttaaagat
     4681 gtagcttttt acattgctga taaaccgcac ttcgttcgtg ttataaaaag cggttttgcc
     4741 ccaaaagcga tctcttctaa aacctcgcag cgtttgaccg ccgattgacg cgtattgata
     4801 aaattcagga tggcccgtga cagtgatagc accggcttgt gttcgaagat aaaattttga
     4861 cacgagtgga atgtacaact gcagattcgt tgaatacttc atgtacccct gcgagctttc
     4921 gaggttccgt gcgccgagcg cattcgcaga aaagacaatc cccctggtcg gtaatatcga
     4981 gtcattaatt tgctccaacg agtagttgac ttcggcaccg ccgaaatttt tccaatgaaa
     5041 aaaatcagca tccggcggtg caaaggtttt gctcaaatag cggcttgtat catcaatcac
     5101 ttttgaacct ttcagaaaac ctgaaatggt gacggtgttt tttccaaacc tgcgaattac
     5161 tgcgggttgc gcaaaccact ccctcgtacg cgtggtgtaa tagtaaatat cgccatctgt
     5221 aaattgtgtc tcgttcccca atccaaaaaa atgcgtccat cttatcgcat cataattggc
     5281 ctttaatgaa aggtcccaat tgccaatgag gtgagggatc agcgaattgt aaattacact
     5341 aaacgctttt tccgaaattg aatagtgtac atcgatcagt tgtcttgaag cgaatggctc
     5401 ttttctccac gcaaagtttg tagcgaaata accgagaccg atatacacat gatcttcgtt
     5461 gctgtaaaat ggataaggca cgattccctt cttatcataa cgataccagt catatttaaa
     5521 atcatgaaca gacgtatcgc tggagagatg caattttgtt cggtcacctt tttcaatgac
     5581 attgttcttg tcgtcgtaaa tatgtgttgt gcccccggaa ctgtcagtga tcaaatcttt
     5641 gctatcaccg ccgatgatcc tgacaaccat tccacgtttc acatctcctt ccactttgta
     5701 tacatcttcc gctcccaatc caaacaaccg tacctctttt gtttcagcag gattaaatgt
     5761 tctttcaaag aatggcgaat cgatcttgtt gccattgtct gctagccggt acactttgat
     5821 cgatgtttcg ccattattcg accggcttac ttcaaaatat tccttttgtt tggagccgat
     5881 cacttgcact tgctccgcca aaaagcgata gtatgtcgtt gcccattcga ctaaatgccc
     5941 gcgcctcgat cttaatttgg agatcagctc ttcgccggag atggaaaata cctcaggagg
     6001 gagttgtctt atcgattctg ttattacttc atccgtgagt gtgcgttgca attcttttgc
     6061 agcgttttgc cagtcatcaa gggtcatttc attggtgaaa aacctgtcga ggtttctttc
     6121 ttcataagta aatgttcgca cgtctttcag atcgtcatcg aatggctgca tgtaaaataa
     6181 accgcctgca gacattccga agtttaagag cagaccatta tgttttgaga acgcctggtc
     6241 gcggtcctgc ggcacgggaa catatgttat cgcatcgccg ttctttcttt caccccattc
     6301 ccattggtct tcgtgccggt cccagtcgcc gatgaaccag tcgaagatcc tttcttttat
     6361 aaaagtttgc tgatcgacgc tcacccggtt gttatcgtat atttttttca gcacttcttc
     6421 ggtgctgtaa aagttttcaa aatttccaag attgtccgcc tctttccaat taccagccac
     6481 cttctgttca aaaagataca agttatcgcc atgcgtatta ttaaaagtgt caagcgcgga
     6541 ttgctttggc agatatacat agcggggatt ggtgtggtaa atattcgccc gttctgccat
     6601 gaaaggcacg gcagatgctg catatggatg agacatcgaa acttcatcgt tcacttgctt
     6661 ttctgcgaac gttccccata agatctccgg caaaactttc gcgagtgtct tgttcacaga
     6721 tcgcagtgtg tactcttttt catttgcagt tttaagatgc aaagattttg tttgatgacc
     6781 gcccccggct tcgtatggtt ttaatcctcc tttcgcggtg tcaagcaata tcactggcac
     6841 ggtgaccgga gttgtccatt cttttctata attgcttccc catagaaatt gatgccacga
     6901 agatttttcg tattcggctc cggcgcttac tgtcctgaat tttgtggtgt cctgtaaggg
     6961 tgactgctgc gcatttgcat aaccgtttaa taagaggtaa tagaaaataa tcctgcgaaa
     7021 atattttaac gatccccggg aaaagctatt tccgtttaac atatcagcgc ataattacca
     7081 aaagcgtgca ataaaggcaa ttttatcttg aagaaaggaa ttatcacgcg ttttttcctt
     7141 cggggtcatt ttgagggaac actctcacca gtttgacgaa tcgtcccata taatagtcgt
     7201 tgagtgctgt gatggtaacg ccccaggcct ttcctgacga ggagtgaatg aaaagagttt
     7261 cattgccatt gtgagaaacg attattccca tatgtccaac caccctcact gtgctgtccg
     7321 tgccagtgaa caggatcagg tctccgggtt ttgcatcact gaggggaact tcatgtggga
     7381 catttgtaaa ttgcacagaa gagcgcggaa cgtcgatgtg gaaatggtta aatacatacg
     7441 ttataaaacc tgaacaatcg aaaccctggc taggatcagt ggatgcatat ttataaggaa
     7501 tgccgatgag cgtttcagca aacgatacta tttgctccgg cgtgatttgg ttggtgttga
     7561 tgaaatttga ggtagaagaa tcgatcggtg ggccgggctt aataactgtt ggcctgctgc
     7621 tatctttaga gttcccgcgc ttgttttgta tttgattaca ggaaaataag accaaaatac
     7681 accacgttat taaggacttc ttcatattca tgaaaaaaca aaaaccgttc cgacggggca
     7741 tggatcggca acatgttgcg ctcaattagt gctcatttct ttcgaggtgg atcttcctgt
     7801 aaagttgggc gcgccagatc aaaatgccat cgatcgtagc atgtttcatc gtgaattgcc
     7861 atattttgcc gttttcgtta gagctgagcg ttttggtgct ttcatcataa gtgcaatcca
     7921 acgtgcccat aaaatttgac ttacccttta cgatcttact catggttacg cggtaaatcc
     7981 cagagtcgcc ctcgagaatg ttatactgga cagtttcgtc ctggcacgat gaactcttcg
     8041 cctggcatag cgaacttccc gtccagttcc ctgtgatcag gctggaatct ctgtcgaaga
     8101 atttttgtcc ttgcgcaaca attttctttg tacagcacat tccaaacaac agcaggagag
     8161 taatgaggat ggatcgtgat cggcacataa tcagcgcggc taaagttgaa tggcgacaac
     8221 cgtgatacta agttaagcag attcttttcg ttgccggcag caatttttgg aaacaattgc
     8281 agcaggctat tcatcgccta actttacttc tatgcgaaca attttttgcc ttgcgtacct
     8341 gttgagtttc tttgcagctc actcacagaa ggttgttcat ctcacttccc ccaacggaaa
     8401 tattttattt tcgtttgaca tagaaaaaaa tagaccgacc tacaatgttt cgtacagagg
     8461 caaacgaatt atcgacaaca gttcggttgg agtttctttt gctgacggag aattttcaga
     8521 tggagtcgtt gcattaaaag cagtgtacga ggattcgacc gaagactatg accttgttgt
     8581 tggcaaaaca agccatgtgc acgacactta caaacaggta acaatcccac tgcaacaaac
     8641 atccacaaaa agaaaaataa atattgaagt aagagcgttc aatgatggcg ttgcattcag
     8701 gtatgaattc cccgagcagg acaattggcg atcctttgat cttacggatg aaaacacgac
     8761 tttcaacctg gacgggaata cgattgttca tgggttgctg ttgccgaatt atacttcatc
     8821 gcatgagggc tactacacga ccacttcgat gaaagatttg cgggacgata cgttaatgga
     8881 cctgcctgct ttgtttgaat tacccgacca tactttcctg gcaataacgg aagctgcgct
     8941 actcgactac gcagggatgt atctctcaaa atatgatggc gaacttgtga gtaaactttc
     9001 tcctttgccg cctcctgcag gcgatggaac tatcaaagtg aaagccacta cgccacaccg
     9061 atctccatgg cgggtgttga tgatcagcga ccgcatcggt gatttgattg agagcaatat
     9121 cattactgat ctcaacgaac cctgcaaaat gaaagacgtg agctggatca aaccgggcaa
     9181 aacaacattc ccctggtgga acggaaatgt aacaccggac acgttaaacg caccgggcaa
     9241 caatttcgtg accgcccagt actacattga tttttgcgcg aggaataata tcgaatacca
     9301 ttcggttgtt gaatatggcc tgcatcaatg gtacatggac gacggagtaa gctttcaacc
     9361 cggacctcac gcggatgtga caacacctgt accgggcctc aatatgaaag agatctgcga
     9421 ctacgccgcc ggtaaaggcg ttggaattag agtgtgggtg catttttatg cgttatatcc
     9481 taagctcgac acggcgttcg cgttgtttga gaaatgggga ctaaaaggaa tgatggttga
     9541 ctttatggac cgcgatgacc aggagatggt gaacatgcaa actgagatat tgcaaaaggc
     9601 ttcagcgcat catctgcata tacagtttca cggtgcctat aaaccaacgg gattaagcag
     9661 gacttacccg aatgagttta caagggaagg aaccttgaat tatgaggccg ataaatggac
     9721 cgatggtggt ttgtcacccg atcacgacat caacattccc tttacgcgca tgctcgcggg
     9781 cagcacagat tatcatcttg gcggtttcag ggctgtgccg ccggaaaagt ttaagacgcc
     9841 gcactatacc aggccactgg tcttaggcac acgatgtcac atgctagcca tgtatgtggt
     9901 gcttgaaaat tatttgcaaa tggtttgtga tgatcccggg gcttacgaag gtgagccggg
     9961 ctttgacttc ataaaagaaa ttccgacaac gtgggatgaa acaaaagtat tgaatgcaca
    10021 ggttggtaaa tatataacga tagcccgcag aaaaaataat gactggtatg ttggaacgat
    10081 cgcgaatcat gaggcgaggc aactggctat tccgctcaac attttaccag gtggaaatta
    10141 ttcagcagag atctatacgg atgcaaacga tgtaagcaag gatccaaatc acctgaacaa
    10201 ggaaacacgg cgagtgacaa ataaagatgt gatcaatgtt caacttgccg gcggcggagg
    10261 aatggtgatg cggataacga aggattgaca tggacggatt tatttatggc gcctgaaatt
    10321 atgtagcgca gatgcccggt cggtggggtc ggggcccgga atgacggcgc cgttgctgcc
    10381 atatgttccg gcagcaaact agcttaacag aatttttcat ggtcgctctt aatggcacaa
    10441 cacgttgaac ttattcatac aaaaaaccca aaaccacatg ttcaaaaatc aactggcact
    10501 tgccttgcga aatttgtcga agcgaaaagg ttttaccatc ttcaatatcc tcggcctcac
    10561 gattggtatc accttattta gaaccatcaa ttgtgaatct gcagtctgca atcgccaatc
    10621 ggcaattgct aatctgcaat cgccaattgc aatcgtatca cgcttcgcac accattctgc
    10681 aaaaacggct gtaaagtttt tcgtattgag gaacaatgtt atgcaggtcg tattttaatg
    10741 cctgcgcctt tgcgcttttt ctgaattgcg caagcagttc atcattcgat agtaagttga
    10801 ttgcacaagc gctcatcgtt tctatgtctc caacggcagc ggtgtagccg gtttctccgt
    10861 tgatatttat ctccgttaac ccgcctgcgt cggaactgat aacgggcact gatgctgcca
    10921 ttgcttccat cgcagccagc ccgaaacttt catattcact cggcagcagg aatacgtcgc
    10981 atacgagcag gatctcttct atctgctctt gtttaccaag aaaacgcaca tcgtcctgca
    11041 cctgcagctg gcgtccgagg tcttccatgc tgcggcgctc cggcccgtcg cccaccagca
    11101 gcaattttgc aggtaatttt tcatgcacgt tcgcaaagat gcgtatcaca tcttcaactc
    11161 tttttacctt cctgaagttc gatgcatgaa taattatttt ttcattgttc ggcgcgataa
    11221 cttttctaaa agcgtcgatc ggttttttat tgtaacggct gttgtcaaca aagttttcga
    11281 tcacttgtat gtccttcgtg atcgcgaatg agcgatacgt ttcctctttg agattttcgg
    11341 aaacagcagt gatcgcatcg ctttcattga tggagaatgt aacaaccggt tcgtatgtct
    11401 tatcacgtcc caccagggtg atatcggttc catgcaacgt agtaatcaca ggaatacttc
    11461 ggccggtctt caaaagaatt tgtttggcca tataggcggc agacgcgtgc ggaattgcat
    11521 aatgcacatg cagcaggtca aggtcgtggt tcaggatcac atctaccatt gtgcttgcaa
    11581 gagccagctc atacggcggg taatcgaata gcggataagt tggcacgctc acttcatggt
    11641 aaaaaatatt tgcgctgaag atattcaacc tcacgggctg ctggtatgtt atgaaatgaa
    11701 cctggtgacc tttgtcggca agcgcttttc ccaactctgt tgccagtaca ccgcttccgc
    11761 cataggttgg ataacaaact atacctatac gcatgcaatc taattttca
//
LOCUS       DASQJI010000190         7330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2475271,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000190 DASQJI010000000
VERSION     DASQJI010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7330
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2475271"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..574
                     /locus_tag="VEV83_05645"
     CDS             80..574
                     /locus_tag="VEV83_05645"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidohydrolase family
                     protein"
                     /protein_id="HYK44628.1"
                     /translation="MFDRELIKRISERLKNDNQTIAVGESVTAGLLQAALASATDASL
                     FFQGGITAYNIGQKCRHLLVEPVHAIECDCVSGKISAEMSQHVCSMFASDYGIGITGY
                     AARVPEKNINDLFAYYAIAFKGKVISTEKVSTDKDEGLPAQLFYVEQALKKLEEHLSA
                     QKEN"
     gene            complement(895..1896)
                     /locus_tag="VEV83_05650"
     CDS             complement(895..1896)
                     /locus_tag="VEV83_05650"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK44629.1"
                     /translation="MKLPAKDIKKIAVFRALQLGDMLCVVPAIRALRRAYPAAEITLL
                     GLPWASSFVQRFNMYFDSLIHFPGCYGLPEQPHDDVALHSFITRMRNEKFDLVLQMQG
                     NGTIVNPLMFLFNAKHVAGYYNDESFVASDLFMEYPNYGSEISRHIALMDHLDIPSAG
                     VELEFPLNEKDFKDYCELCVPVVEKRYLCVHPGSRGAWRQWPPQYFAALADYCIEQGF
                     TVVVTGTKEEQPLSAEFIKCMHHPVIDLTGKTSLGAVAVLIKNAFMLIANCTGVSHIA
                     AALQTPSVIISMDGEPERWAPLDKQLHRTIDWTKGHQFENVFAETVKLMEDCRELVH"
     gene            complement(1893..2873)
                     /locus_tag="VEV83_05655"
     CDS             complement(1893..2873)
                     /locus_tag="VEV83_05655"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK44630.1"
                     /translation="MNYNISVVIPTYKRPELVVRCLAALARQNYPFEYFEIIVVTDGP
                     DDRTKKEVSYFKEGHPYLRINFTSTTGKKGPAAARNRGASLAKGELLVFTDDDCIPQC
                     DWLRAYWSEYQSSLKSEIAFTGRTIVPHSTRPTDYEKNIARLQTAEFITANCACSKQA
                     FETVGGFDEEFPVAWREDSEMQFKLMGAEIPIRKINDAVVLHPVRKAHWGISLKEQKK
                     SMFNALLFKKHPLLYKEKISGKPLWNYYAMVLLVCFSAAAYASEMPVVSIAAMIVWAI
                     LVAQFTSKRLKGTSKKFSHVAEMLFTSALIPFLSVYWTLYGAFRYKTILL"
     gene            complement(2879..4594)
                     /locus_tag="VEV83_05660"
     CDS             complement(2879..4594)
                     /locus_tag="VEV83_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HYK44631.1"
                     /translation="MYTLGINAVFHDSSACIVKDGQLLAAAEEERFTHVKHGKRPIPF
                     STYELPFHAIDYCLQVAGIHLSDVDNIAYSFNPYTLLGRHVKNENIVLPLQPHLTTKS
                     KEWSSEWDPLFLSFIVNAPGQLVDGYPHHLQKRFAGAKAEINKWHFVDHHIAHAASAF
                     FPSPFHRAAVMVLDGRGEKATSSYYIGEGNELELLSQVNMPHSLGLLYEAVTSHLGFL
                     HSSDEYKVMALASYGKPVFLDAFRKIINVHEEGKYTIENANFENVFGKRRMKHEPFTQ
                     KQFDIAHSLQKALEETAVQLSNWLHARTGSDDLCLAGGVALNCVMNAVIRDNTPFKNI
                     WVQPAAGDAGTALGAALWVDAQKMKEDYRRKEMEHAYWGPDYSDEEVEQFLNWTKVSY
                     KKLDNIPQETAAILAEDKVIGWYQGRMEFGPRALGSRSILASPVNASMQQRLNEIKDR
                     EDFRPVAPVVLEEDVAEWFEQGSYSPFMLFVYNVKEDKADKIPAVRHVDNTARIQTIN
                     RKQHPLYYDLVKEFKKKTGVPVLINTSFNTRGEPIVCTPRDAIECFWTSPFDALVINS
                     FLLEK"
     gene            4886..5890
                     /locus_tag="VEV83_05665"
     CDS             4886..5890
                     /locus_tag="VEV83_05665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK44632.1"
                     /translation="MIDADSSSGKELKIFTWHIHGTYLYYLAQGDYTIYIPVNNERNE
                     GYYGRGETFPFGDNVIEVPAHEVRELEFDCILFQTNKNYLVDQYELLSERQRALPRIY
                     LEHDPPVKHPSDARHVMNDPDVLMVHVTHFNKLMWQHDHGNVRVIEHGVLRPPVAYSG
                     ELEKGIVVINNLYQRGRKLGADIFEEVSKCVPLDLVGMGTKEYGGLGEVLHPHLPAFI
                     SRYRFFFNPIRYTSLGLAVCEAMMMGMPVVALATTEYVTTIQNNVSGFIHTDVDYLVE
                     KMQLLLQNRQLAFSLGTEAKKFAEERFNIGRFVSDWKHAFQTAINLKKINYEKTNSIY
                     "
     gene            5865..7205
                     /locus_tag="VEV83_05670"
     CDS             5865..7205
                     /locus_tag="VEV83_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HYK44633.1"
                     /translation="MKKRIAFISEHASPLAVLGGVDNGGQNVYVAELAKELARKGYLV
                     DVFTRKDNAEIPEVVNWLQGVRVINVKAGPQVFVEKEKLLQYMNEFTDNMHRFMREQH
                     IRYDIMHANFFMSALVASNMKKRTGIPYVVTFHALGLVRLAHQKEMDKFPAERFDIER
                     MIVKDADQLIAECPQDRNDLVHYYDADINKISIVPCGFNPKEFNVIDKTIARKQLGLS
                     NHETILLQLGRMVPRKGIDNVIRSLNKISGGLKNMRLLIVGGESDTADESLTPEIGRL
                     KKIAEEENVSGHVTFTGRKRRDVLKYFYAASDIFITTPWYEPFGITPLEAMACGTPVI
                     GANVGGIKYSVDDGKTGFLVAPKDPVALAKKIERLLTDPALMASMKKNAVKRVHKFFT
                     WKIVAESVSNLYENIIPAYHKQPQPGKRILLPEFSLKDVENVLNESFLPRLKPQ"
BASE COUNT         2061 a         1631 c         1675 g         1963 t
ORIGIN      
        1 tttttctggt agcatgcaat ttctttacca aactgcaggc tggcatgcaa ttttgagtgg
       61 tgaactaaat ctatgaaaaa tgttcgacag agaattgatc aaaagaattt cagaaaggct
      121 aaaaaatgac aaccagacaa tcgcggtcgg ggaaagcgtg accgccggct tgctgcaggc
      181 tgcactggct tcagctaccg atgcttcttt attcttccag ggcggcatta ctgcgtacaa
      241 cattgggcag aagtgcaggc acttgctggt ggaacctgtg catgcgatcg agtgcgactg
      301 tgtaagcggc aaaatttccg cggagatgag ccaacacgtt tgctctatgt ttgccagtga
      361 ttatggaatt ggaataacag gttatgcggc acgcgtgccg gaaaaaaata tcaacgactt
      421 gtttgcatat tatgccattg cttttaaggg gaaggtgata tcaactgaaa aggtttcgac
      481 cgataaagat gaaggattac cggcgcaatt attttatgtt gaacaagcgc tgaagaaatt
      541 ggaagagcat ttgtcggcgc agaaagaaaa ttgaattgat aaaaaataca ttcattggca
      601 tgaggccgat attcaaccca tccgggttgc gttatctctg cttcgacccc cgacaagcgt
      661 cgggcggcta ttcatattac ggctcttcga ggcttgctga agcggttcaa aaattatgag
      721 tatttaatga gctcaaagtt tcaatgcttc tgttgttttg gaatctgaat tagcgtcgac
      781 ctttcgatac atcatccact tgtttggtgg acgaatattc tgattgcgcc tcttcgaggt
      841 tgctaaagaa atcgaaaatt atttgaactt ccaggtgatt gagtacaggt tatctcaatg
      901 caccagttcc ctgcaatcct ccattaactt caccgtttcc gcaaagacat tttcaaattg
      961 atggcctttt gtccagtcga tcgtacgatg taattgtttg tcgagtggcg cccacctttc
     1021 gggttcgccg tccatactga tgatcacact cggcgtttga agagcggctg cgatgtgaga
     1081 cacaccagtg cagttcgcga taagcataaa cgcgtttttt attagaacag cgacagcacc
     1141 caaacttgtt ttgccggtta gatcgatcac cgggtggtgc atgcatttga tgaattcggc
     1201 ggatagcggc tgctcttctt ttgttccggt tacgacaaca gtaaaccctt gctcaataca
     1261 ataatcagcg agagcggcaa aatattgcgg tggccattgc ctccacgcgc cgcgcgaacc
     1321 tggatgaacg cagaggtatc gtttttcaac cacagggacg cataattcgc agtagtcctt
     1381 gaagtctttt tcgttcaatg ggaattcgag ttcgacaccg gctgacggaa tgtccaggtg
     1441 atccatcagc gcgatgtgcc ggcttatctc cgagccataa ttgggatatt ccatgaaaag
     1501 atcagaagcc acaaagcttt catcattata ataacccgcc acgtgctttg cattgaacag
     1561 aaacatcaat ggattaacga tcgtgccgtt gccctgcatc tggagcacaa gatcgaattt
     1621 ttcatttcgc atgcgtgtga tgaatgagtg cagcgcaaca tcatcatgcg gctgctcagg
     1681 cagaccatag caaccgggaa aatgaattaa gctatcaaaa tacatgttga acctttgcac
     1741 gaatgaactg gcccacggca ggcccagcaa ggtgatctca gccgccgggt atgcacgccg
     1801 cagcgcgcgg atcgccggga ctacgcaaag catatcgccc aactggagtg cgcgaaatac
     1861 agctattttt ttaatgtctt tggcagggag tttcataata ggattgtttt gtacctgaac
     1921 gcgccgtata aagtccagta aacagacaag aatggaatga gcgccgacgt gaaaagcatt
     1981 tcagctacat gagaaaactt tttcgaggtg cccttcagtc tcttgctggt aaactgtgcg
     2041 accaatatcg cccacacaat catcgctgcg atcgaaacaa ccggcatctc acttgcataa
     2101 gcggccgctg aaaaacaaac aagcaagacc atcgcataat aattccataa aggctttccg
     2161 ctgatctttt ctttatacaa caaaggatgt tttttaaaaa gcaatgcgtt gaacatcgat
     2221 tttttttgtt cttttaaact gattccccag tgcgctttgc gaaccgggtg caataccacc
     2281 gcgtcattga tttttcggat gggaatttct gcgcccatca atttaaactg catctcgctg
     2341 tcttcgcgcc acgcgacagg aaactcttca tcgaaacctc ccactgtttc aaatgcctgc
     2401 tttgaacatg cacaattcgc agtaatgaat tcggcagttt gcaaccgggc aatatttttt
     2461 tcataatctg tgggcctggt tgaatgcgga acaatggttc tgccggtaaa tgcgatctca
     2521 ctcttcaacg acgattggta ctcgctccag tacgccctta gccaatcgca ttgcggaatg
     2581 caatcatcgt cagtaaaaac aagcaattca ccctttgcca acgatgcgcc tctattcctg
     2641 gcggcagccg gccctttttt tccggtggtc gaggtaaagt tgatccttaa atacggatga
     2701 ccttctttga agtagctaac ctctttcttc gtacgatcat ccggtccatc ggtaacgaca
     2761 attatctcaa aatattcaaa tggataattc tgtcgtgcca aagcggccaa acatctcacg
     2821 accaattccg gccgtttata tgtcggtata acaaccgaga tattgtaatt cataggtttt
     2881 atttttcaag caggaatgaa ttgataacaa gtgcatcgaa cggcgatgtc caaaaacatt
     2941 cgatcgcatc cctgggcgtg caaacgatgg gctcgcctcg tgtgttaaat gatgtgttta
     3001 tcagcacggg cacgccagtc ttcttcttga attcttttac gaggtcataa tacaatggat
     3061 gttgtttgcg gttgatggtt tgaatccgcg ccgtattatc aacgtgccgt accgcgggaa
     3121 tcttatcagc tttatcctcc ttaacattat atacaaacaa catgaacggg gaataactgc
     3181 cttgctcaaa ccattccgct acgtcttctt ccaacaccac cggcgcaacc ggcctgaaat
     3241 cctcacgatc ttttatttca tttaaacgtt gttgcatcga cgcattaact ggtgacgcaa
     3301 gaatcgaacg gctgcccaat gcacgcggcc cgaattccat tctgccctgg taccatccga
     3361 tcaccttatc ctccgcaaga atagcggccg tttcttgcgg aatgttgtct aattttttgt
     3421 aggacacttt tgtccagttc agaaattgct caacctcctc gtcgctgtaa tcaggacccc
     3481 agtatgcatg ttccatttcc ttacgacgat agtcttcttt cattttttgc gcatccaccc
     3541 aaagcgccgc gccaagcgcg gtgcccgcat cgccggccgc aggctgcacc caaatatttt
     3601 tgaatggcgt attgtctctt atcaccgcat tcattacaca gttcaatgca acgccgcctg
     3661 caagacacag atcatcggaa cctgttcttg catgtaacca gtttgatagc tggactgctg
     3721 tctcttcaag cgctttttga agtgaatgtg caatgtcaaa ttgcttttgc gtgaacggtt
     3781 cgtgcttcat gcgccgtttg ccaaaaacgt tttcaaaatt tgcgttctct atagtatact
     3841 ttccttcttc atgtacattg atgatttttc tgaaagcgtc gagaaagact ggcttgccat
     3901 aagaagcgag cgccatcact ttatattcat cggatgaatg caagaatccg aggtgtgaag
     3961 tgactgcttc atataacaag ccaagggagt gaggcatgtt aacctgtgat aataattcga
     4021 gttcatttcc ttcgccgata taataactgc tggtggcttt ttcaccgcgt ccatcaagca
     4081 ccatcaccgc tgcccgatga aatggcgaag ggaaaaaagc gctggccgca tgcgctatgt
     4141 gatgatcaac aaaatgccat ttatttattt ctgctttagc gcctgcaaat cttttttgca
     4201 aatggtgggg gtacccgtca acaagctggc cgggtgcatt gacgatgaat gagaggaata
     4261 acggatccca ttcagaactc cactcctttg attttgttgt aagatgtggt tgaagcggca
     4321 atacaatatt ttcatttttt acgtgcctgc ctaacagcgt gtacggattg aatgaataag
     4381 caatattgtc aacatcactc aaatgaatac cggcgacctg caggcaataa tctatagcat
     4441 gaaacggaag ctcatacgtt gaaaatggaa ttggccgctt gccatgtttg acgtgagtga
     4501 atctttcttc ctctgcagcg gccaacagtt gtccgtcttt tacaatacat gcagatgaat
     4561 catgaaacac cgcgttaatg cccaatgtgt acatagatta gctttaatta aacagcttag
     4621 ttcatcgagt tgcgctcaaa tatcgaaccg ttgatatttg aacatcaaaa taaaattgta
     4681 tgacgtggaa tatcaaatag ccgaacatta aaaaattttc gcaacgaaaa aaaatgggaa
     4741 acgctgtcaa gctaaactgt ggaaacttat acatagcaaa cttgtatctg taaaagttca
     4801 attcactact tcttagaagt catggattaa aaagaagtgg cattattttt aagcgactct
     4861 aagtgctaat cagaaaaaca cgtcgatgat tgatgctgac tcttcatcag gtaaagagtt
     4921 aaagatcttc acctggcata ttcacggaac ttatttgtat tatctagcgc aaggcgacta
     4981 cacgatctat ataccggtca acaatgaaag gaatgaaggt tattacggaa ggggtgaaac
     5041 ctttccgttc ggcgacaacg tgatcgaagt gccggcacat gaagtgcgcg agcttgaatt
     5101 cgattgtatt cttttccaaa cgaataaaaa ttatttagtt gatcaatatg agctgctgag
     5161 cgaacggcag cgcgcgctac cgcgaattta tctcgaacac gatccgcctg taaaacatcc
     5221 ctccgatgcc cgccatgtta tgaatgatcc tgatgtactg atggttcatg taacacactt
     5281 caataagttg atgtggcaac atgatcatgg caacgtccgg gtgatcgagc acggcgttct
     5341 acgtccgccg gttgcttatt caggcgaact ggaaaaagga atcgtggtca tcaacaatct
     5401 ttatcagcgc ggacgaaaat taggcgcaga catttttgaa gaagtgagca aatgtgtgcc
     5461 gctcgatctg gtcggaatgg gcactaaaga atatggtgga ctgggagaag tgttgcatcc
     5521 gcacctgcct gcttttatta gccgctatcg attttttttc aacccgatca ggtatacaag
     5581 tctaggtctt gccgtgtgcg aagcaatgat gatgggaatg cccgtagttg cgctggcgac
     5641 gaccgaatat gtgaccacta ttcaaaataa tgtttccggt tttattcata cggacgttga
     5701 ctatctcgtt gaaaaaatgc aactcctatt acaaaacagg cagctcgctt tttcattggg
     5761 aacagaggcg aaaaaatttg cggaagaaag attcaatatc gggcgctttg tgtctgactg
     5821 gaaacatgcc tttcaaactg ccatcaacct aaaaaagata aactatgaaa aaacgaatag
     5881 catttattag cgagcatgct tcgccattgg cagtccttgg aggagtggat aacgggggac
     5941 agaatgtata cgtggcggaa ctggcgaagg aacttgcgcg caaaggctac ctggtggatg
     6001 tgtttacgcg aaaagacaac gcggaaattc ctgaagtcgt gaactggctc cagggcgtgc
     6061 gggtgatcaa cgtgaaggcc ggcccgcagg tttttgtcga aaaggaaaag ctgctgcagt
     6121 acatgaatga atttactgac aacatgcatc ggtttatgcg tgaacaacac atacgatatg
     6181 atatcatgca cgcgaatttc ttcatgtcgg ctttggtcgc ttcaaacatg aagaaaagaa
     6241 ccggcatacc atacgtagta acttttcacg cattaggact ggtacgtttg gcacatcaaa
     6301 aagaaatgga caaattcccg gcggaaagat ttgatatcga gagaatgatc gtaaaagatg
     6361 ctgatcagct catcgctgaa tgtccgcagg accgcaatga ccttgttcat tattacgacg
     6421 cagacataaa taaaatttct attgttccct gcggattcaa cccgaaagaa tttaatgtga
     6481 tcgataaaac aattgcaaga aaacaattag gactaagtaa ccatgaaaca attctactcc
     6541 agttaggcag aatggtgccg agaaaaggga ttgacaatgt tattcgttcg ttgaataaga
     6601 tcagcggcgg tttgaaaaat atgcgactgc tcattgtagg cggcgaaagc gataccgccg
     6661 atgaaagttt aacccctgag atcggtcggc ttaagaaaat agctgaagaa gaaaatgtat
     6721 cagggcatgt gactttcacg ggcagaaaaa gaagagatgt gctgaaatat ttttacgcag
     6781 catcagacat tttcattacg acgccatggt atgaaccgtt cggcataacg ccgctcgaag
     6841 ccatggcctg tggaacaccg gtgatcggcg caaatgtggg cggaataaaa tatagtgttg
     6901 acgatggcaa aactggtttc ctggttgctc ccaaagaccc tgtggctttg gcaaaaaaaa
     6961 ttgaacggct gctcacggat cctgcgttga tggcttcgat gaaaaagaat gcggttaaac
     7021 gggtgcataa atttttcacg tggaagatcg tggcagagtc agtgagcaat ctttacgaaa
     7081 atattattcc cgcataccac aagcaaccgc aaccgggcaa gcgcatttta ctgcctgagt
     7141 tttcattgaa agacgttgaa aatgtactca acgaatcgtt tctgccaaga ttgaaacctc
     7201 agtaacaaag tatgaagaaa ataaatctgc ggcttccgga gatagtgcgt tacgctcccc
     7261 gcgccggcgg ctcggggata agggctgtgt ttatcgacaa ggacggtaca cttataaaag
     7321 acgttccata
//
LOCUS       DASQJI010000191         7084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1092617,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000191 DASQJI010000000
VERSION     DASQJI010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7084
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092617"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1518
                     /locus_tag="VEV83_05675"
     CDS             <1..1518
                     /locus_tag="VEV83_05675"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK44634.1"
                     /translation="TYQNDFGKGSLTAFGGFSVQSSKINSSSIHAQGFPEGSGLQNIS
                     SASTITGATDDNTAWGLVSVIGRANYVYDSKYLLSVSARYDGSSRFDPSGRWGLFPAA
                     SVGWVLTKEDFLSNSKWLSNLKLRVSYGLTGDQEIGNFQYLSYWSPGRYDGLPGLIPR
                     NLGNSDLTWQRNKMFNVGFDYEMWKGRVSGSLEFFQGNRTKLLAEAVVPATSGFSSIT
                     INSGEEENKGVEFSVDAYAVRSKNFSWNISFNVSYLKNTIKSLYTDNELLSAYSDLFP
                     THILRVGEAVGSFWGVKFLGVDPQTGDPTYEDLNKDGVIDDNDQQILGKATPDYFGGL
                     TNNFKYKNWDASLVMQFSVGNKVYNLIKSTYLTGGWSDEGWDDKYVLYQVYANNATLI
                     NKRWEKPGDQTDIPRASLYFQNYLQNSSQFIDDASFLRIRTVNVGYTIQPKTTKVFTS
                     LRLYAQVQNLHVFTKYYGFDPEVSSNGGDVPETAGVDYAAYPQARTITFGVNFNF"
     gene            1722..3092
                     /locus_tag="VEV83_05680"
     CDS             1722..3092
                     /locus_tag="VEV83_05680"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK44635.1"
                     /translation="MKRIKLIIIISASILSLWSCKKVLDLTSPNDVDDNTVFTTVSGL
                     RNARIGMYNTLQDKNYYGGYYPLMAECYTDDGTTGGYDVIDLNEFAYRAVGSANIYVE
                     GSYNAIYHTIYTANKIINNIDDVPGLEKDEHDNTLAEALFIRALAHFDVLRFWGEHWD
                     KSSAYGISIVTNTDAPTEPVARSSVEESYQQIIGDLQQAISLFNTNNGNQYASDASAK
                     ALLARVYLYHGDLNEAADMATDVINNASFDLFGPDDFTKIYTEKLTQESVFELKFDPQ
                     NTSAYNAATYLRDDALRSDVIFIANADLNTFFENRPDDRRSSLVDFVNNDLSIEPDGR
                     TQKYRGETTKDNSGYIIRLAEVYLIRAEARGRVNGLSDLNKIRTSRGMSALTAADVPD
                     DATYLNAILDERRAELNFEGHRLFDLARTGKVEEVLGSGVLPIMPIPQREIDGTGGVV
                     EQNPGY"
     gene            3159..4508
                     /locus_tag="VEV83_05685"
     CDS             3159..4508
                     /locus_tag="VEV83_05685"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HYK44636.1"
                     /translation="METVLRNQAAEKNSAREATRAHQLYERRKKLVPNGLGIFNPSSV
                     QSAHDATIVDVDGNELIDFAGGIGVLNAGHCPAPVVKAIQEQAATFIHTSFNVAPYDK
                     YLDLAEKMIELLPHGEQTKVMFINSGAEAVENAIKIARQATKRSAVIAYSAAFHGRTM
                     MAMALSSKITYKAGCGPFAPEVYRIDYPVYRKNIQTISEEEFSEIEIEKLKEFFKTSV
                     RPEDVAAIIIELVQGEGGFFVAPKAYVKKLRELCDEHGIILIFDEVQSGFGRTGKWAA
                     FHHYDVIPDISTWAKSLGSGMPIAAVMGKARIMDSAAPSTIGGTYAGNAVCCAAALAT
                     LNYMQEININSLGEKVGKIVRARFEKFHQQFPHIISEVRGLGAMLAFEISHNADHTKP
                     NAELTTKIIHECARRGLVIISAGVNGNVIRILSPLVIEERLLNKGLDILESVLLELG"
     gene            4759..6186
                     /locus_tag="VEV83_05690"
     CDS             4759..6186
                     /locus_tag="VEV83_05690"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HYK44637.1"
                     /translation="MISNYINGEYVPAKSAKTEKLINPATEEVLDEISWGNADDCKAA
                     IDAASAAFKAWSKTNVYQRANILKKAADIMRANIETFSKQMVMESGKPIAEAKAEWAT
                     AANLFEWFAEEGKRAYGKTIPSVRNDKRMMTIWQPMGVVGVITAWNFPAYNPSRAWSA
                     ALAAGCTLVTKGSEFTAMTTNNIVNALIEAGVPAGVVNNINGDAASIGDELLSNYAVK
                     KISFTGSTRVGKILMDGASRTNTKLTLELGGNAPVIIGADVDVDVMAKSAVFAKVRNA
                     GQVCISPQRFFVHDKIFDHFTDAAKANLQKLKVGNGLNAETNMGPLINQRQQQQVLSI
                     IDEAKRSGATTTATNIDTEKGWFVSPTLLTDVDASTAAINKEIFGPVLPLIRFQNKNE
                     VVDWANKTQYGLASYVWTNNLNDAYFFAESLEFGMVGINEWLPQGVEAPFVGWKQSAL
                     GHESGSEGLFEYLEKKLISFGGMNF"
     gene            6290..>7084
                     /locus_tag="VEV83_05695"
     CDS             6290..>7084
                     /locus_tag="VEV83_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44638.1"
                     /translation="MTYGAIALIPPLIVVVLAIIMRTSFEPLLIGCLVGFVIIGFYEK
                     TNFFTGFVESMERVIGDPSDGGSVWVILVCGLYGSLIGLMVRSGGTLKFGEWALKRIR
                     TKTGALMGTWGLGLAIFLDDYLSALTVGLSMRKITDAFKVPREMLAYIVNTTAPPWCV
                     IAPISTWTIFVGAVLETSHVAPPGRGLATYWQMIPFVAYGYISVLLIPIFVLGVLPWF
                     GKMRRANERAETTGNLFGSGTTMAGVLDVSPLNPERRSKVIYFILPM"
BASE COUNT         2035 a         1455 c         1783 g         1811 t
ORIGIN      
        1 acttatcaaa atgattttgg caaaggcagt ctcaccgcgt ttggtggttt tagtgtgcag
       61 tcgtccaaaa taaatagctc aagcattcat gcgcagggat ttccggaagg cagcggcttg
      121 caaaacattt caagtgcttc aactataaca ggagcaacgg acgataatac tgcttgggga
      181 cttgtctcgg tgatcggtcg ggcaaattat gtttacgact caaaatatct tttatcggtg
      241 agtgcgcgtt atgatggttc atcgagattc gatccgtctg gtcgttgggg tttgtttcct
      301 gcagcgtctg ttggctgggt gctgacaaaa gaagattttc tttcaaactc aaaatggctg
      361 agcaatttga aattacgtgt gagctacggc ctcaccggcg accaggagat aggaaatttc
      421 caatatctca gctattggtc gccgggacga tatgatgggt tgccgggact catccccaga
      481 aacctgggca attcagatct tacttggcaa agaaataaaa tgttcaatgt tggttttgat
      541 tacgagatgt ggaaagggcg tgtgagtggt tcgcttgaat tcttccaggg taaccgcacg
      601 aagttgcttg cggaagcggt tgttcccgct acgtccgggt tttcaagcat aacgatcaat
      661 tcaggcgaag aagaaaataa aggtgtggaa ttttcagttg acgcgtatgc ggtgcggagc
      721 aagaattttt catggaacat ttctttcaac gtgagctatc tgaaaaacac catcaaatcg
      781 ttgtacaccg acaatgaatt actgagcgct tatagcgact tgtttccgac acacatattg
      841 cgagtaggtg aagctgtagg atctttctgg ggcgtgaaat ttttgggtgt tgatccgcag
      901 accggtgatc ctacgtatga agacctgaat aaagatggcg tcatcgatga taacgatcag
      961 caaatcctgg gaaaagcgac acccgattat ttcggtggac tcaccaacaa tttcaaatac
     1021 aaaaattggg atgcttctct tgtaatgcaa ttcagtgttg gcaacaaagt gtacaatctt
     1081 attaagtcca cttatctcac tggtggctgg agtgatgaag gctgggatga taagtatgtg
     1141 ctttaccagg tgtatgcaaa caatgcaaca ctcattaata aacgctggga aaaaccaggc
     1201 gaccaaactg atattccgcg tgcatcattg tactttcaaa attatttaca aaactcttcg
     1261 cagtttatag acgatgcatc gttcttgcgc atccggacgg tgaatgttgg atacactatt
     1321 cagccgaaaa cgacgaaagt ttttacatca ttgcgtttat atgcgcaggt tcaaaatctg
     1381 catgttttca caaagtatta cggcttcgat cctgaagtaa gcagcaatgg gggtgatgtg
     1441 ccggaaactg ccggcgtgga ttatgctgca tacccgcagg ccagaaccat tacgttcggg
     1501 gtaaacttta atttctaaac gacgatgatt atgaacccgg caatatcact ttggtcatcg
     1561 cctgttgcgt cgcactcttg tgcgttcggt tcaatattcg gcaagaacag cacacggatg
     1621 aaacagatgt tcacatatcg gaaaatgaaa tccaaaatat ccgtgtccga aggccgtgtc
     1681 atccgtgttc tatcaattca acatttttga aataagatat tatgaaaaga ataaaactga
     1741 ttattattat ttctgcaagc atcttgagtt tatggtcctg caaaaaagtg ctcgatctta
     1801 cgtcgccaaa tgacgtcgac gacaacacgg tgtttacaac agtttccggt cttcgaaatg
     1861 cgcgaatagg aatgtataac acgttgcagg ataaaaatta ttatggtggc tactatccgc
     1921 tgatggccga atgttatact gacgatggca ctaccggcgg ttatgatgtg atcgacttga
     1981 acgagtttgc ctacagggct gttggttcag caaatattta tgttgaagga agctataacg
     2041 cgatctatca tacgatctat acagcaaaca agatcattaa taatatagat gacgtcccgg
     2101 gccttgaaaa agacgaacac gacaatacac ttgcagaagc attgtttata agagcattgg
     2161 cacatttcga tgtactgcgt ttttggggag agcattggga taagtcatcc gcgtatggca
     2221 tttcaattgt aaccaacacc gatgcgccca cagaacctgt tgcgcgcagt tcggttgaag
     2281 agtcgtatca gcagatcatc ggtgatcttc agcaagcgat cagtttattt aatacaaaca
     2341 acgggaatca gtatgcaagc gacgcttcgg ctaaagcatt actggcacgc gtttatttat
     2401 atcatggaga tctcaacgaa gcggctgaca tggcgaccga tgtgattaac aatgcaagtt
     2461 ttgatttgtt cggtccggac gatttcacaa agatctatac agaaaagttg actcaggaaa
     2521 gtgtgttcga attgaagttt gatccgcaaa acacaagcgc atataatgcc gcaacttatt
     2581 tgcgggatga tgctttgcgc agcgacgtga tctttatcgc caacgccgat ctgaatacct
     2641 ttttcgaaaa tcgtccggac gacaggcgaa gttcgctggt tgattttgta aacaacgatc
     2701 tgagtattga acctgatggc cgtacgcaaa aatatcgcgg cgaaacgacg aaggacaatt
     2761 cgggctacat cattcgcctt gccgaagttt atttgattcg ggctgaagca agaggccgcg
     2821 tgaacggact ttcagactta aataaaattc gaacttcgcg tgggatgagc gcattaaccg
     2881 cagccgacgt gcctgacgac gcaacatatt taaatgcgat cttagacgag cgccgtgctg
     2941 aattaaattt tgaaggccat cgccttttcg atctggcacg tacgggaaaa gtggaggaag
     3001 tgttaggaag cggtgtgctc ccgatcatgc caatacccca aagagaaatt gacggaacag
     3061 gtggcgtagt ggaacaaaat cccggatatt gaaaggctgg cacgcgccga ccctaaagga
     3121 ggaaaaaagt tttcgtttga agaacaaaga ggtaatttat ggaaacagtt ttaagaaacc
     3181 aggctgctga aaaaaattcc gcgagggaag cgaccagggc tcatcaactc tatgagcgga
     3241 gaaaaaaatt ggtgccgaat ggccttggta tttttaatcc gtcatcagtg caatctgcgc
     3301 atgatgcaac aatcgttgat gtcgacggaa atgaattgat agattttgca ggaggaattg
     3361 gcgtattgaa tgccgggcat tgtccggcgc ctgttgttaa agcgatccag gagcaggcgg
     3421 cgactttcat ccataccagc tttaacgtcg caccttacga caagtatttg gacttggctg
     3481 aaaaaatgat agaactgttg ccgcatggcg agcaaacaaa ggttatgttc atcaacagcg
     3541 gcgccgaggc agtggagaac gccataaaaa ttgcgaggca ggccacaaaa cgcagcgccg
     3601 tgatcgcata cagcgcagct tttcatggca ggacgatgat ggcaatggcg ttgagttcaa
     3661 agattactta caaggcaggc tgtggtccat ttgcgccgga agtgtatcgc atcgattatc
     3721 ctgtttacag aaaaaacatt caaacgattt cagaagaaga attctcagaa attgaaattg
     3781 aaaagctgaa ggaatttttc aaaactagtg tgcgacctga agatgttgcc gcgatcatca
     3841 ttgaattggt acagggtgaa ggcggttttt tcgtagcgcc gaaagcatat gtaaaaaaat
     3901 tgcgcgagct atgtgatgaa catggaatca tattgatatt tgatgaagtg cagagcggct
     3961 ttggtcggac gggcaagtgg gctgcatttc atcattacga tgtgattccc gatatttcta
     4021 cgtgggcaaa aagtttgggc agcggcatgc cgattgcagc agtgatgggt aaagcgcgca
     4081 taatggatag cgcagcgcca agcacaatag gaggcacgta cgccggcaat gctgtttgct
     4141 gtgctgcggc attggcaaca ttaaattaca tgcaggaaat caatatcaat tctctcggtg
     4201 aaaaggttgg taaaatagtt cgtgcaagat ttgaaaaatt tcaccaacag tttccacaca
     4261 tcatcagcga agtacgcggg ctgggagcga tgctcgcgtt tgaaatttcg cataatgcag
     4321 atcatacaaa gccaaatgcg gaactcacga cgaagatcat acatgaatgt gcaaggcgcg
     4381 ggctggtgat catcagcgcg ggtgtgaatg gaaatgtaat tcgcatttta agtccgttgg
     4441 tgatcgaaga acgtttattg aataaagggc tggatatttt agagagcgtg ttgttggaac
     4501 tcggatgaca gcccccaacc cctaaagggt gggagagggt cagcgcaaat gacggcgctt
     4561 tgtgaaactt tctgtcttcc ggccttggtg gtttacggct tggaaccacg aagcgaccac
     4621 gacacaagaa tacgcgaagc aaaactcgtt tcatccgtgt gccattcttg ttgaataaag
     4681 aaccgaacgt acaagtgtgc gacgcaagag gagctcaata ataataacgc agttgggtcc
     4741 ataataaaaa aaattacaat gattagtaat tacatcaatg gcgagtatgt tccggcgaaa
     4801 tcagcaaaga ctgaaaaatt gattaatcct gcaaccgaag aggttctgga tgaaatcagc
     4861 tgggggaacg ctgacgattg taaggctgcg atcgacgcag cttccgcagc atttaaagca
     4921 tggagtaaaa caaacgtcta ccaacgggcg aacattctaa agaaggcggc agacatcatg
     4981 cgcgccaata tcgaaacatt ttcaaaacaa atggtgatgg aaagcggtaa accgatcgcc
     5041 gaagccaaag cggaatgggc aaccgctgcc aatttgtttg aatggtttgc agaagaagga
     5101 aaacgtgcgt acggaaaaac gatcccgtcc gttcgaaatg ataaacgcat gatgaccatc
     5161 tggcaaccga tgggggttgt tggagtgatc actgcctgga attttccggc ctataatcct
     5221 tcacgcgcat ggtccgctgc actcgcagca ggatgcacac tagttaccaa aggatcagag
     5281 ttcacggcaa tgacgacgaa taatattgta aacgctttaa tagaagccgg agtgcccgcc
     5341 ggagttgtaa acaacatcaa tggcgacgca gcatcgatag gagacgagct attaagtaac
     5401 tatgccgtca aaaaaataag ttttaccgga agtacccgcg ttggaaaaat tttaatggac
     5461 ggcgcatcaa gaacaaatac gaaacttacg ctcgaacttg gcggtaacgc gccggtgatc
     5521 atcggtgccg atgtggatgt tgacgtaatg gcgaaatctg ctgtctttgc taaagtgcgg
     5581 aacgcaggcc aagtctgtat ctccccgcaa cgcttttttg tacacgataa aatttttgat
     5641 cactttacgg atgccgcaaa agcaaacctt cagaaattga aagtgggcaa cgggcttaat
     5701 gcagaaacaa acatgggccc gctgatcaat caacgtcaac agcaacaggt gctaagcatc
     5761 attgacgaag caaagagatc cggcgcaaca acaactgcca caaacatcga caccgaaaaa
     5821 ggctggttcg tttcgcccac tttactcact gacgtagatg cttcaactgc tgcgatcaac
     5881 aaagagatct ttggacctgt gttgccactg attcgttttc aaaataaaaa tgaagtggta
     5941 gactgggcga acaaaacaca gtatggcctt gcgtcgtatg tgtggaccaa taatttgaat
     6001 gatgcatatt tttttgctga atcattggag tttggtatgg ttggaataaa tgaatggctt
     6061 ccgcaaggcg ttgaagcccc ttttgttgga tggaagcaaa gtgcgctcgg tcatgagagt
     6121 ggcagtgaag gcttatttga atatctcgaa aaaaaattaa taagctttgg tggaatgaat
     6181 ttttagcgac aaaaattagt atacacttta catggtaaca atattcagtc agcgcgtttg
     6241 gctttcatta aaagcagaaa ccaaaactcc cttttagggg tccggcagca tgacctacgg
     6301 cgcaattgca ttaatacctc cgctgattgt ggttgtactc gcgatcatca tgcgcacatc
     6361 ctttgagccg ctgctcatcg gttgccttgt tggtttcgtc attatcggct tttatgaaaa
     6421 gacgaatttt tttacgggtt ttgttgaatc catggagcgc gtgatcggcg atccttctga
     6481 cggaggatct gtttgggtga tactcgtgtg cggcttgtat ggctcattga tcgggctgat
     6541 ggtgcgaagt ggcggcactt taaaattcgg cgaatgggcg ctgaaacgga tccggacaaa
     6601 aactggtgcg ctcatgggca cgtggggact tggcctggct atttttctcg acgattatct
     6661 cagcgcattg accgttggtt tatcgatgcg taaaataacc gatgcattca aagtaccgag
     6721 agaaatgctt gcgtatatcg tcaacacaac cgcgccgccg tggtgcgtca tcgcgccgat
     6781 ttccacatgg acaatttttg ttggtgctgt tcttgaaaca tcgcacgtgg caccgcccgg
     6841 tcgcggcctt gcaacgtact ggcaaatgat cccgtttgtc gcatacggtt acatcagtgt
     6901 gctgctcatt ccaatctttg tcctgggagt acttccgtgg tttggtaaaa tgcggcgagc
     6961 aaacgagcgc gcagaaacaa ccggtaattt gtttggaagc ggaacaacga tggccggcgt
     7021 cctggatgtt tctccattga atcctgaaag aagatcaaaa gtgatttatt tcatcttgcc
     7081 catg
//
LOCUS       DASQJI010000192         5149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1707346,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000192 DASQJI010000000
VERSION     DASQJI010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1707346"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VEV83_05700"
     CDS             complement(<1..345)
                     /locus_tag="VEV83_05700"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK44639.1"
                     /translation="MFGKRTKNLLLACLCFVPVMATLAQYGDSARLLKLQAPDSFCVE
                     MRTSIGNMVIQVNRHWSPLAADRFYQLVTSGYFNDSRLFRSNRKYLQFGIGNDSAVNA
                     FWDRHPIKDEPVI"
     gene            456..767
                     /locus_tag="VEV83_05705"
     CDS             456..767
                     /locus_tag="VEV83_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HYK44640.1"
                     /translation="MNVAVKLVNILRNKYIAALTGFVILMLFIDHNDIFVQLDRRRQL
                     NELLASKRFYEQQIAQTKKNLSDLQNNSAALERYAREKYLLKKDNEDVFVVSSAKPQK
                     N"
     gene            883..1113
                     /locus_tag="VEV83_05710"
     CDS             883..1113
                     /locus_tag="VEV83_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44641.1"
                     /translation="MPNFTPEDLLLYHAGELSDPESEAIANELSTNWALREKFNVFVE
                     AVNRLNAMQLQSPRKQTVQSIMRYAMRKRVIV"
     gene            1173..1838
                     /gene="nth"
                     /locus_tag="VEV83_05715"
     CDS             1173..1838
                     /gene="nth"
                     /locus_tag="VEV83_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HYK44642.1"
                     /translation="MTRNERFRFAFDYFQTHIPVPETELVYENPYELLVSVILSAQCT
                     DKRVNMTTPAIFERYPTAEAMASATFEELFPYVKSISYPNNKTRHLIGMAKMLVNDYA
                     GKVPLKVEELIKLPGVGRKTANVITSVIDLQPNMAVDTHVFRVAARIGLTVNAKTPLA
                     TEKQLIQFIPKELIHKAHHWLILHGRYVCHARNPNCDECGLPAVCKYYQTIIKKNRKP
                     KSS"
     gene            complement(1835..3664)
                     /locus_tag="VEV83_05720"
     CDS             complement(1835..3664)
                     /locus_tag="VEV83_05720"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HYK44643.1"
                     /translation="MDKFIVSARKYRPQTFDTVVGQQHITTTLKNAIKNNQLAHAFLF
                     CGPRGVGKTTCARILAKTINCENLQADGEACNVCGSCKSFNEGTSFNIHELDAASNNS
                     VDDIRTLVEQVRFMPQAGKYKVYIVDEVHMLTASAFNAFLKTLEEPPPYAIFILATTE
                     KHKIIPTILSRCQIFDFKRITTNDTVQHLQKIIAKENIKAEKAALQVIAQKSEGCMRD
                     ALSILDKIVSFTNGEVTYQNTLEHLNILDADYYFRLLDHLLHQDISGAMLLFDEINSK
                     GFEGDHVMNGFAEFLRNILVSKDAKAAALLDVVEGMQDKYVSVAATVSMSYLVTALNI
                     LNESEINYKMARNKRLHVELALIKLNFLQQAIELANDNGSVVRKKKVDAPVIHVAKPI
                     ATPQARPKASDSKLFIESPANKNGSKKEREPDVQLTTVQDAVPAYENSDAHQIKKPER
                     AKPKVNEGSKKNLLDSLRDKYGDKYLIEEIKDAESLSYEKLNQVWQQYTMKLEDQKKH
                     SSANTFKVARLNIETENFFTITVHAITQQKFIEQEKTMLCDFIQQAFNNRSINFKVLV
                     EEGKKEELPVHLTLNSRQRFERIAEKYPLVRELKNRLNLDLDY"
     gene            3851..4618
                     /locus_tag="VEV83_05725"
     CDS             3851..4618
                     /locus_tag="VEV83_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HYK44644.1"
                     /translation="MISKGQTDLKKFLDNKVEQFNQPSFIKDDPISIPHLFSKKQDIE
                     IAGFFAAIFAWGNRTTIINKSKELMTLMDMSPHEFCLHADPSNLEGLSSFKHRTFKTT
                     DLLYFIEFLKYHYGQHPSLETAFIKWGQNVEQMLTGFHHYFFSLEHIRRTRKHIATPE
                     NKSNCKRLNMFLRWMVRNDKKGVDFGIWKKIKPSQLVCPIDVHVARVARRFNLLHRKQ
                     IDWQAALELTEYLRTLDPADPVKYDFALFGLGVMEKY"
     gene            4667..5146
                     /locus_tag="VEV83_05730"
     CDS             4667..5146
                     /locus_tag="VEV83_05730"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK44645.1"
                     /translation="MKITSLIASHVKEVFDGTNWTEIGIEDTVADLTFEEATSVTQAS
                     RNSIASILYHVKFYNDVVRQRLHGVSPHINEANGFDMPELKSEEEWKQLIDDAHQSFE
                     RLSAAAENFPEERLEELTPNGESSYYKNLHGIAEHAHYHLGQMVILKKLIRSKYTPQ"
BASE COUNT         1474 a         1142 c         1092 g         1441 t
ORIGIN      
        1 tatcacaggt tcgtctttta tgggatgcct gtcccaaaac gcgttcaccg cgctgtcgtt
       61 gccaattccg aattgaagat atttcctgtt gctcctgaaa agccggctgt cgttaaaata
      121 cccggaagta acgagttgat agaaccgatc ggcagccagc ggtgaccagt gccggttcac
      181 ctggataacc atgttcccga tgctggtgcg catttctaca caaaaagaat ctggagcctg
      241 caatttcaat aaccgggcgg aatcgccgta ttgtgcaagc gttgccatta ccggaacaaa
      301 acatagacag gctaaaagga gatttttcgt gcgtttcccg aacatgaaaa ttttgatgag
      361 cgtttcttga tttccaaagc cttgcaattt atacacatat tcacacgttt taaaaacagg
      421 ttcccggatt ttgtagattt acgccatcaa atcttatgaa cgtagccgtc aaattagtaa
      481 acatcctgcg taataagtac atagcagcgc tcacaggctt tgtcatcctt atgcttttca
      541 tcgatcacaa cgacatcttt gtacaactcg accgtcgccg ccaactaaat gagttgcttg
      601 caagcaaaag gttttatgag cagcagatcg cacaaacaaa aaaaaatctt tccgaccttc
      661 aaaataattc tgccgccctc gagcgatacg cccgcgaaaa atacctactt aaaaaagaca
      721 acgaagacgt gtttgtggtt tcctccgcaa agccgcaaaa aaattaagcc gcataacaat
      781 aatataattt ctacagccgt tttagtagca taagttctgt taccgttttg aagactatcc
      841 aatattctgt gagtaaagag ttgtttattt aaaatgattt gtatgccaaa ttttactccg
      901 gaagatttat tactttatca cgccggcgaa ttgagtgatc cagagagtga ggccattgcg
      961 aatgaacttt ccactaattg ggctctaagg gagaaattca acgtctttgt ggaggcggta
     1021 aatcgcctca atgcgatgca attgcaatcg ccgcgtaaac aaacagtaca aagtataatg
     1081 cgctatgcca tgcgcaagcg agtgattgtt tagtcagccc gaaaaaattt ctgttcaaag
     1141 gctaatttag cagccagaac agaaattttt ttatgacccg caacgaacgg tttcgttttg
     1201 ccttcgacta tttccagacg catatcccgg ttcctgagac ggagctcgtc tacgaaaacc
     1261 cgtatgagct tttggtttct gtgatccttt cagcgcaatg cacagataag cgggtaaata
     1321 tgacaacgcc cgccatcttt gaaagatatc cgaccgctga agcaatggcg tccgccactt
     1381 ttgaagagct tttcccatat gtgaaaagca tatcctaccc gaataacaaa acgcggcacc
     1441 tgatcggcat ggctaaaatg ctggtgaacg attatgcagg gaaggtgccg ctgaaagttg
     1501 aagaattaat aaaacttccg ggcgttggaa gaaaaacggc aaacgtgatc acgtctgtta
     1561 ttgaccttca gcccaacatg gctgttgata cccacgtttt tcgcgtggca gcgcgaatcg
     1621 gacttacggt aaacgcaaag acgcctctcg caacggagaa gcagctaatt caatttatcc
     1681 caaaagaact cattcacaag gcgcatcact ggttgatatt gcacgggcga tacgtttgcc
     1741 atgcccggaa tccgaattgc gacgaatgtg gtttgccggc ggtttgcaag tattatcaaa
     1801 caataatcaa aaagaacagg aagccaaaga gttcctaata gtcaaggtcc aggttcagcc
     1861 ggttcttcag ctctcttacc aggggatatt tttcggcgat cctttcgaaa cgctgacggc
     1921 tatttagtgt tagatgaacg ggtaattctt cctttttgcc ctcctccacc agcactttga
     1981 aatttatgct tcggttgttg aaggcctgtt ggatgaaatc acaaagcatc gtcttttcct
     2041 gttcgatgaa tttttgctgc gtgatagcgt gcactgtgat cgtgaaaaag ttctccgttt
     2101 caatattgag ccgggctact ttgaaagtat tcgctgatga atgttttttt tggtcctcga
     2161 gcttcattgt atattgttgc catacctggt tcaacttttc atatgaaaga gattcggcat
     2221 ccttgatctc ctcaatcaga tacttatcgc cgtacttgtc acgcaaactg tccaataaat
     2281 tctttttgct gccttcgttc actttcggct ttgcgcgctc tggttttttt atctgatgag
     2341 catcagaatt ttcatatgcg ggaacggcgt cctgaaccgt tgtcaattga acgtcaggtt
     2401 ccctctcctt ttttgaaccg ttcttatttg cgggtgattc aataaatagt tttgagtcgg
     2461 atgctttcgg cctggcttgc ggggttgcga tcggtttagc gacgtgaatt accggcgcat
     2521 caactttctt ttttctgacc acactcccat tgtcattagc cagctcaatg gcctgctgca
     2581 aaaaattgag ttttattaaa gcgagttcaa catgcagccg tttattgcgc gccattttat
     2641 agttgatctc agactcgttc aaaatattca gggcagtgac taagtaagac atacttaccg
     2701 ttgctgcgac agaaacatat ttgtcctgca ttccttcaac cacgtcgagt aatgcggccg
     2761 cctttgcatc tttgctcaca agtatattgc gcaaaaattc agcaaagcca ttcattacat
     2821 ggtcgccttc aaaacccttg ctgttgatct cgtcaaacaa caacattgca ccgcttatat
     2881 cctggtgtaa caaatgatca agcagccgga aataataatc ggcgtcgagt atgttaaggt
     2941 gttcgagcgt attctggtaa gtaacttcgc cattggtaaa gcttacgatc ttgtcgagga
     3001 tgcttaaggc atcacgcatg cacccttcgc ttttttgagc gatcacctgc agtgccgctt
     3061 tttctgcctt gatattttct ttcgcgatta ttttttgcag gtgctgaaca gtatcatttg
     3121 tcgtaatacg tttaaaatcg aagatctggc aacgagacag tatggttggg atgatcttat
     3181 gcttttccgt tgtagctaaa ataaagatcg catatggagg cggttcctcg agcgtcttca
     3241 aaaaagcatt gaaagccgac gcagttagca tatgaacctc atccacaata tacactttgt
     3301 atttgccagc ctgcggcata aaccgcacct gctcaacaag tgtcctgata tcatctactg
     3361 aattgttgct ggcagcatcg agttcgtgaa tgttgaatga agtcccttcg ttaaagcttt
     3421 tgcatgagcc gcatacattg cacgcctctc cgtcagcttg gaggttttcg caattgatcg
     3481 tttttgcaag tatgcgggca caggttgtct tgccaacccc acgcgggccg caaaacaaaa
     3541 acgcgtgcgc taactggtta tttttaatgg cattttttaa agtggtcgtg atatgctgtt
     3601 gccctacgac ggtatcaaag gtctggggac gatactttct cgccgaaaca ataaatttgt
     3661 ccatagcaaa ccgcaattta agccgctagg cggagatatt tcttgctcac ttggttaaat
     3721 tatgcacacc acagccaaag gagccagagg ctaaattcgc atcggtatat tgagagaaga
     3781 tcatccttaa ccaaatcaag aaaatacctt taaggaaagg aattatttac aagcgatata
     3841 aagttttcca gtgatcagta aaggccaaac agatctcaaa aaatttcttg acaacaaggt
     3901 tgaacaattt aaccaacctt cattcattaa agacgatccg atcagcattc cgcacctgtt
     3961 ctcaaaaaaa caagacatag aaattgcagg gtttttcgca gcgatctttg catggggcaa
     4021 ccgcacaacg atcatcaaca aatcgaaaga attgatgacg ttaatggata tgagcccgca
     4081 tgaattttgc ctgcatgctg atccgtcaaa cctggaaggt ctctcaagct ttaaacatcg
     4141 aacttttaaa acgacagatc tgttgtactt catagaattc ctgaagtatc attacggtca
     4201 acatccttct cttgaaactg cgtttataaa atggggccaa aatgttgagc agatgctgac
     4261 cggctttcat cattattttt tttctcttga acatatacga agaacaagaa aacatattgc
     4321 gacacccgaa aacaagtcaa actgcaaacg gctgaatatg tttttgcgct ggatggtgcg
     4381 caatgataaa aaaggcgttg atttcggcat ctggaaaaaa ataaaaccat cgcaacttgt
     4441 ttgcccgatc gatgtacatg ttgcaagagt agcccgccgt tttaatttat tgcaccggaa
     4501 gcagatcgac tggcaggctg cactggaatt aaccgaatat cttcgcacgc tggacccggc
     4561 cgacccggtg aaatatgatt ttgccttgtt cggattgggc gtgatggaga aatattgatt
     4621 cgtcaaatgg gcgaaagagc aagttgtaaa ttttaaattg aagacaatga aaataacatc
     4681 tcttattgca agccacgtca aagaagtttt tgatggcaca aactggacag aaataggtat
     4741 tgaggacact gttgcagatc taactttcga agaagcaacc agtgtaactc aagcttccag
     4801 gaatagtatc gcttcaatac tttatcatgt aaaattttat aatgacgttg tgcgacaacg
     4861 acttcacggc gtatcgccgc acattaatga ggcaaacggt ttcgacatgc cagaactaaa
     4921 aagtgaagaa gagtggaagc aactcatcga tgatgcacat caatcatttg aaaggttatc
     4981 tgcagccgcc gagaattttc ccgaagaacg actggaagaa ttaacaccga acggcgaatc
     5041 atcctattac aagaatctgc acggaatcgc cgaacatgcg cattaccacc tgggacagat
     5101 ggtgatcttg aaaaagctca tacggagcaa gtatactccg caataaatt
//
LOCUS       DASQJI010000193         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_939670,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000193 DASQJI010000000
VERSION     DASQJI010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939670"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="VEV83_05735"
     CDS             complement(<1..1202)
                     /locus_tag="VEV83_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44646.1"
                     /translation="MKNQRTRFWLLGYFVCNSVLIHAQLCNNNLGDPIVNVTFGTAGA
                     SALPSNTTYSFTHGCPSKGQYTIDDFLFGCGGSWVQIIGDHTPNDVDGNYMLINAEST
                     PGVVISDTAHNLCDNMTYQFSGYIANVMQDVLTCGGKAVLPNLTFTVQKLDGTVLASY
                     NTGDIPITNDKVWKQYGLSFKMPTGVNDVILKVNANAPPGCGNAFVIDDIVFSNCGPA
                     VSVTVNDTTANQDVCADYANSFIMKGAYSAGFSDPVVQWQNSLDTGRTWNDIAGETTT
                     TYVVPPIASGLVEYRMVVAERANINSANCRMRSNAISINVHPLPPHKLPESLEACTGT
                     DYILPAPDPNSLDVKWTGPNGYTSTMRQSVIPKFQFADTGLYKFRQNFFYGCFSLDSF
                     NITAAKGIA"
     gene            complement(1299..>1961)
                     /locus_tag="VEV83_05740"
     CDS             complement(1299..>1961)
                     /locus_tag="VEV83_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HYK44647.1"
                     /translation="FYGTGLKNDNNKRLLRSALKHLFPSAGVEVQTDLLAAARALCKN
                     GNGISCILGTGSNSCYYNGRRIVKNSPGLGFILGDEGSGAYLGRKVVQHFLYNTFDEE
                     LMLAFNKKYNTSDTEILEGVYRQPQPNRYLASFSLFLAENRGHYMIENIIEDGLNDFF
                     FTHLCKYNESWLYPIHFTGGVAYGFRDVIKELCHSYEMELGVILKRPMDGLINFHIGD
                     PA"
BASE COUNT          555 a          450 c          422 g          534 t
ORIGIN      
        1 gctatgccct ttgctgccgt tatattaaat gagtccaacg agaaacagcc atagaaaaaa
       61 ttttgccgga atttatagag acctgtgtcg gcaaattgaa atttcgggat caccgattgg
      121 cgcattgtgg aagtataacc attcgggcct gtccatttta catcaagtga gtttggatcc
      181 ggcgctggca aaatatagtc ggttccagtg catgcctcca aactttcagg aagtttatgt
      241 ggcggcaaag gatgcacgtt gatggaaata gcgttcgatc tcatccggca attagcggaa
      301 ttaatgtttg ccctttcagc aacaaccatc cggtattcga ccaaacccga tgcaatcggc
      361 ggcactacat aagttgttgt tgtctcaccg gcaatatcat tccatgttct gcccgtatct
      421 aaactatttt gccactgcac gacagggtcg ctaaaacctg cggagtaggc gcctttcata
      481 atgaaactat tcgcgtaatc tgcacaaacg tcttgattag ccgtcgtgtc attaacagtt
      541 actgacaccg ccggcccgca gttgctgaaa acaatatcat caattacgaa agcgttgccg
      601 caacccggcg gagcatttgc attgaccttt aagatgacgt cgtttacccc ggttggcatt
      661 ttgaaagaaa gaccatattg tttccagacc ttgtcatttg taataggaat gtcgccggtg
      721 ttatagctcg caagcacagt accgtcaagt ttctgaactg taaaagtgag attaggaagt
      781 acggccttgc cgccgcaggt taaaacatcc tgcatcacat tagcaatgta tcccgaaaac
      841 tggtaggtca tgttatcgca cagattgtgc gccgtatcgg aaataacaac gcccggtgtg
      901 ctttcggcat tgatcagcat gtaattaccg tcaacgtcgt tcggagtatg gtcacctata
      961 atttgcaccc atgacccgcc gcagccaaat agaaaatcat cgattgtata ttgccccttc
     1021 gaaggacagc catgcgtaaa agaatacgtt gtatttgacg gcaaagcaga cgcgccggct
     1081 gtaccgaatg taacatttac aataggatca cccaggttat tgttacataa ttgagcatgg
     1141 attaaaactg aattgcaaac aaaatacccc aataaccaaa accttgttcg ctgatttttc
     1201 actgactaaa atgttcctgg taatttttga acgcacataa cgaggcaata taaaactatt
     1261 ttgaaggttt atcgtagcga gtcggatcaa ctacgctgtt acgcgggatc gccaatatgg
     1321 aaattgatca agccatccat tggccgtttg aggatgacgc ccagttccat ttcataactg
     1381 tggcagagct ctttgatcac atctctaaag ccgtaggcca cacccccggt gaaatggatg
     1441 gggtatagcc agctttcatt gtatttgcac aaatgcgtga agaaaaaatc attcaggcca
     1501 tcttcgatga tgttttcgat catataatgg ccccggtttt cagcgaggaa taaagaaaat
     1561 gaagcgagat aacgattcgg ttgtggctgc ctgtaaacac cttcaaggat ctctgtatcg
     1621 cttgtattat attttttgtt gaaggcaagc atcaattctt catcgaacgt attatacaaa
     1681 aaatgttgaa ccaccttcct gccaagatat gcgccgctgc cttcatcgcc gaggataaac
     1741 ccgagcccgg gactgttctt tacgatcctt cttccgttat aataacaaga gttagaaccg
     1801 gtacccagga tacaacttat tccatttcca tttttacata aagctcttgc ggctgcgagc
     1861 agatcagttt gcacttccac acccgcagat ggaaataaat gtttcaacgc agaacgaaga
     1921 agacgtttgt tattatcgtt tttcaagccg gtgccgtaaa a
//
LOCUS       DASQJI010000194         7389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_632142,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000194 DASQJI010000000
VERSION     DASQJI010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7389
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632142"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..1040
                     /gene="corA"
                     /locus_tag="VEV83_05745"
     CDS             63..1040
                     /gene="corA"
                     /locus_tag="VEV83_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HYK44648.1"
                     /translation="MDAIVNAAVYSQGRRVANLELNGIDGVLHQPDQFVWVGLHEPDE
                     ELLRTVQQQFHLHDLAIEDAHNAHQRPKLESYGETLFIVLRTAQINPNDHHIEFGETH
                     FFLHHNFLITVRHGSSVAYKEVRSHCESTPKLLAKGPAFALYAVMDSIVDQYFPVIDA
                     LEHELIQVEEKVFGEKPSRETTQRVYELKRELLEVKRAISPLIDISNRLMRFDIQLIP
                     DDTRPYFRDVYDHTLRITEMLDNTRELVTAALEANFSLTSISQSEVSKKFAGWAAIIG
                     VPTMVAGIYGMNFSDMPELHWAWGYPVVLTITFGLCVGLYIFFKRSGWL"
     gene            1087..1578
                     /locus_tag="VEV83_05750"
     CDS             1087..1578
                     /locus_tag="VEV83_05750"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYK44649.1"
                     /translation="MIRKASSDDFEFVYGMYMHPQVNRFLLYDMMGADQFRPVFEELL
                     QRGVKFIYENERVPVGMFKLVPNSYRSSHVVYLGGLAVHPDFAGRGYGMSMMNEIILY
                     AEQHGFLRIELSLYAENAKARRLYEKAGFQEEGMSRKLTYLRSENAFVDEVLMSWLSD
                     KIK"
     gene            1645..2898
                     /locus_tag="VEV83_05755"
     CDS             1645..2898
                     /locus_tag="VEV83_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK44650.1"
                     /translation="MKRNYYIVVLIMITFFVISFITNVLGALNPAISSDFKLSYTLAA
                     CLPFVFFIAYGVISIPSSMLVETYKQKKIMVAGFAVSFVGSLLLAIAPGYLNSLLSLF
                     LIGCGMAMLQVVINPLLRTAGGEEHYAFNSVLAQLIFGGASFLSPLVYSYLVENLNDP
                     NANSFLSTLRSLTPANLLWISLYWLFAVISVIMIVVVMLSKFPKVELTSEEKSGPWHT
                     YVRLFRKRIVVLYFIAMICYVGTEQGTSYWISQFLATYHHYDPNTQGTTAVSDFWLYM
                     LFGGLLGLVLLKLIDSRKVLISFTVLALVSLTVALFAPANISFYAFACVGFFASVMYP
                     IIFSLALNSVEEDHGSFAGIILTGIIGGAIVPLVIGGLSDVFGLRYGMFFLYITLGYI
                     LAIGFWAKPIISNKTVFDKKEIADA"
     gene            2895..3746
                     /locus_tag="VEV83_05760"
     CDS             2895..3746
                     /locus_tag="VEV83_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYK44651.1"
                     /translation="MSKDKVIGIDLGATNVRGAYVAADELSGIRSKRIRSQGTEQEVL
                     DDVFELADQLVTDEVVAIGIGVPSVVDLEHGVVQDVQYIPSWKEVPLKKLMEDRYHVP
                     VYINNDANCFALGEYYFGGGKGYSSMIGLTIGTGVGAGVIINKKLYAGHNCGAGEFGI
                     VDYLDKVYEYYSSGSFFQNVYGLDGEFVFEKAQQGDDDALRLYAELGTHLGNNIKLIM
                     YTYDPELIILGGAVRHAYDFFQRTMWERIRTCVYTKVADRLLIKVSELENSGILGAAA
                     LYYDAVR"
     gene            4094..6736
                     /locus_tag="VEV83_05765"
     CDS             4094..6736
                     /locus_tag="VEV83_05765"
                     /inference="COORDINATES: protein motif:HMM:NF012906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HYK44652.1"
                     /translation="MKTFFFFLSLIFIQQSFGQNRTENFQMILHDDWRMQSSTADKST
                     GAQISQKDFSAKGWYKISVPSTIIAGLLSNNEYNFDPFYGKNFEKLADKRMDHPWWFR
                     KEFDLPASEKDKNVILKLHGINYKANVWLNGVKIADSSYIKGPFRIIELDVSKQIKYD
                     GRNVLALQIVRPFNPNKHDGDLAIDYADWIHYPPDYNGGIVNNVEIKTYDRVGVRYPL
                     VTTKFDLPSLDVAHLTVDAEVVNYTDKEKDAVVKGKINDDLTFEQQVHLMPNEIKQVT
                     FTPAQYPQLNVKNPRIWWPWQYGEPQLNRIEISIVREGNLSNTVSENFGIREIDSKLI
                     NDHSREFIVNGKPIMLRGAAWSPDIFQRHSAEREEQELRLVRDMNMNIVRSEGKLEDD
                     NFYDLCDKYGLLVMTGWMCCGAWQYPENWNGAERAVAMASDSSVMYWLRNKACVMVWL
                     NGSDMPPRDPSVESDYLSIEKYLKWPNPTISTADASESKVSGYSGVKINGPYDWVPPI
                     YWETDSNKYGGSWSFATEISPGPSIPPYESLIKFIPKDSMWYTNSVWQYHCGTMQFGN
                     TKIFDNALNQRYGKSSSINEYLAKAQLQNYEGHRAMMEAYGLNKYNTATGVVQWMLCN
                     PWPSLIWHTYDYYLYPAGTYFGMKKSMESLHVMYSYKSNEVDIINCLLQRFSGLTVKA
                     DVYNLDGTVKYSNTVSTDVEADGTKHCFAIPQIAGLSATYFLRLELKDAKGATQSINW
                     YWLSQKQDALRWQKSEWYYTPQSDFSDFTALSKMPKSTLDVKYASKEKENKTEHTITI
                     TNTGKAVAFFVHVRALKDKNADDILPVIFSDNYISLAPGESRTIECRYENKYAGSASP
                     YILTSAWNLDVANSKAENNAGFEK"
BASE COUNT         2049 a         1489 c         1758 g         2093 t
ORIGIN      
        1 acttcgcatt tcaaaaatcc atacttttag tagctgctta ctaagcttgt aaaaatttga
       61 ttatggatgc catcgtaaat gctgccgttt atagccaggg acggcgggtt gcgaatcttg
      121 aactcaatgg catagatggt gtcttgcacc aaccggatca gttcgtgtgg gtaggcctgc
      181 atgagcctga tgaagaattg cttcgaacgg tgcagcagca atttcacctg cacgatcttg
      241 cgatcgaaga tgcgcataat gcacaccagc ggccaaagct tgaatcatac ggcgaaaccc
      301 tttttattgt gctgcgtact gcgcagatca atccaaatga ccaccacatc gaatttggtg
      361 agacccactt ttttctgcat cacaattttc tgataacggt gaggcacggt tcatctgttg
      421 catacaaaga agtgcgttct cattgcgaaa gcacgccaaa gttgctcgca aaggggcccg
      481 ccttcgcgct gtacgccgtc atggactcga tcgttgatca atattttccc gttattgacg
      541 cgctcgagca tgaactcatc caggtagaag aaaaagtgtt tggcgaaaag ccgagccgcg
      601 aaacaactca acgtgtgtat gaacttaaac gcgaactgct ggaagttaag cgagccatat
      661 cgccgctgat cgatatttcc aacaggttaa tgcgcttcga tatacaactc attcctgatg
      721 atacccgtcc ctatttcaga gacgtatacg atcatacttt acgcatcacg gaaatgctcg
      781 ataatacacg tgagctggtc actgcagcgc tggaggcaaa tttttctctc acctcgatct
      841 ctcaaagtga ggtatcgaaa aagtttgcgg gatgggccgc gatcatcggc gtgcccacca
      901 tggttgccgg tatttatgga atgaatttct ccgacatgcc ggagctgcat tgggcctggg
      961 gttatcctgt tgtactaacc atcacattcg gactttgcgt tgggttgtat atctttttca
     1021 aacgttcagg ttggctgtaa cctgattttc gcctttccgt tatttcaaaa aacatttata
     1081 gatacaatga taagaaaagc aagcagcgat gattttgaat tcgtgtatgg aatgtacatg
     1141 catccgcagg tcaaccgttt tttgttgtat gacatgatgg gcgctgacca gttcaggcca
     1201 gtgtttgaag agttgctgca aagaggcgtt aagtttattt atgaaaatga aagagtgccg
     1261 gttggtatgt tcaaactggt accgaattct tacagatcat ctcatgtggt ttatcttggc
     1321 ggacttgcgg tacaccccga tttcgcagga aggggatacg gaatgtcgat gatgaacgaa
     1381 ataattctgt atgcggaaca acatggtttt ttgcggatcg aattaagcct gtatgcggaa
     1441 aatgcgaaag cgcggcggct ttatgaaaaa gctggctttc aggaggaggg catgtcaaga
     1501 aagttgacgt atctaagatc agaaaatgct tttgttgacg aagtgttgat gtcgtggcta
     1561 agcgataaga taaaatgagc tttccaaaat aacatccttt cttttatctt gtgctttcat
     1621 atctcttgcc actaaatacg tttcatgaaa cgcaattatt acatcgtggt cctcatcatg
     1681 atcacgttct ttgtcatttc tttcataact aatgttcttg gtgcactcaa tcctgccatc
     1741 agcagtgatt ttaagctgag ttatacactg gccgcgtgcc tcccattcgt attttttatt
     1801 gcatacggcg ttatttcaat cccctcgagt atgcttgttg aaacatataa gcagaagaag
     1861 atcatggtgg ccggctttgc cgtgtctttt gttggttcac tgcttttagc aatcgctccc
     1921 ggatatttga attcgttgtt gtcgcttttc ctgatcggct gtggtatggc aatgttgcag
     1981 gtcgttatta acccgctgtt gcgcaccgca ggtggtgaag aacattatgc attcaattct
     2041 gtgctggccc aattgatatt tggcggcgct tcgtttttaa gcccgcttgt ttattcgtac
     2101 ctcgtggaaa atttgaatga tccaaatgca aactcatttc tctctacact acgatcatta
     2161 acgcctgcaa atttgttgtg gatatcgctg tattggctgt ttgcagtgat ctcggttata
     2221 atgatcgttg tggtcatgct ttcgaaattt ccaaaagtag aattaacaag cgaagagaag
     2281 tccggcccgt ggcatacgta tgtaaggttg ttcaggaaac gtattgttgt gttgtatttt
     2341 atcgcaatga tctgttatgt tggcactgag cagggaacgt cttactggat ctcgcagttc
     2401 ctggcaacat atcaccatta cgacccgaac acacaaggaa caacagcagt ttctgatttt
     2461 tggttataca tgttgtttgg cggattactt ggattagtgt tattaaaact gatcgacagc
     2521 cgcaaggtgc tcatcagttt tactgtcctt gcattggtgt cgttaacggt cgcattgttc
     2581 gcgcctgcca acatttcatt ttacgctttc gcatgcgttg gattttttgc atcggtgatg
     2641 tatccgatta ttttttcgct tgcgttgaac tctgtcgaag aagatcacgg ttctttcgcc
     2701 gggatcattc ttacaggcat catcggcggc gcaattgtac cgcttgtcat cggcggattg
     2761 agcgacgttt tcggattgcg ttacggtatg ttctttttgt atatcacgct cgggtatatt
     2821 ttagcgatcg gtttttgggc gaagccgatc atttccaaca aaacggtttt tgataaaaaa
     2881 gaaattgctg atgcatgagt aaagacaagg tgataggtat tgatcttggt gcaacgaatg
     2941 tgcgcggtgc ttatgtggcg gcggatgaat tgtcagggat acgatcgaaa cggatccgaa
     3001 gccagggcac ggagcaggaa gttttggatg atgtttttga actcgctgac caattggtga
     3061 ctgatgaagt ggtggctatt ggcattggcg tgccgagcgt agttgatctt gagcatggag
     3121 tagttcagga cgtgcagtac attccgtcct ggaaagaggt gccattaaag aaactgatgg
     3181 aagatcgtta tcacgttccg gtgtacatca acaacgatgc aaattgtttt gcactgggtg
     3241 aatattattt tggaggagga aaagggtata gttcaatgat cgggttaacg attgggacag
     3301 gtgttggggc aggtgtcatc atcaacaaaa aattgtatgc ggggcacaat tgcggagcag
     3361 gtgaatttgg gatcgtcgat tatctcgata aagtttacga gtactatagc agcggctctt
     3421 tcttccaaaa tgtttacggg ctcgatggtg agtttgtttt tgaaaaagcg cagcagggtg
     3481 atgacgatgc gctgcgatta tatgcagaac ttggaacaca cctcggcaac aacatcaagc
     3541 tgatcatgta tacatacgat ccggaactga tcattctcgg cggcgcggta cggcacgcgt
     3601 atgatttttt tcaacgaacg atgtgggaac gcatccgcac ctgcgtttac acaaaggttg
     3661 ccgaccgcct gcttataaaa gtatcggagc tggaaaatag cggcatattg ggtgccgccg
     3721 ctttgtatta tgatgcggtt cgatgaaccc aattgctaag agaatgatca ctggaacgtt
     3781 gctccgttga ccgcttaata agggagataa ggttgattgc gtgtggcccg tttttctact
     3841 aaggtaataa ggtgccatca gttcgatcac cactctttca acacgaaagc agccattcga
     3901 ctacgcgaca agaacttggc ccgcaccttt ttccctaata agcaaactcg tttatccgtc
     3961 taatcttttt accaaattcg gttaaattcc aaattggtgc agtgttcagc caacactgac
     4021 tcggatcatc aacggttgtt ttgtttgtaa ttatcttcgc ggcgtcagtc attcctaact
     4081 attcatcttc tatatgaaaa catttttttt ctttttatcg ctgatattta ttcagcaatc
     4141 attcggtcaa aacaggacag aaaactttca aatgatcctg catgatgatt ggcgaatgca
     4201 atcatctacg gccgataaat ccaccggagc tcaaatttct caaaaagatt tttcggctaa
     4261 gggctggtat aaaatttccg ttccgtctac gatcattgcc ggcctgcttt cgaacaacga
     4321 atacaatttc gacccgtttt acgggaagaa ttttgaaaag ctggccgata aacgaatgga
     4381 ccatccctgg tggttcagaa aagaattcga tctgcctgcg tcggagaaag ataaaaacgt
     4441 gatcctgaaa ttgcacggca tcaattacaa agccaatgtg tggctgaatg gtgtaaagat
     4501 cgccgactca tcttacataa aaggtccgtt ccgaattatc gagctggatg ttagcaaaca
     4561 aataaagtat gacggaagga atgtgcttgc cctccagatc gtgcggcctt tcaatccaaa
     4621 caaacatgat ggcgatctgg ctattgacta tgccgactgg attcactatc cacccgatta
     4681 caacggtggc atcgtaaata atgtggagat aaaaacgtat gacagggtgg gagtgcggta
     4741 tccgctcgtt actacaaaat tcgatcttcc ctcgctggat gtggctcatc tgacagtaga
     4801 cgccgaggta gtgaattata ccgataagga aaaggacgcg gtggtaaaag gaaagattaa
     4861 tgatgatcta acgttcgagc agcaggttca cttaatgcca aatgaaataa agcaagtaac
     4921 ttttactccg gcgcaatatc cacaattgaa tgtgaagaac ccccgcatat ggtggccgtg
     4981 gcaatacggt gagccgcaat tgaacaggat tgaaatttca atcgtgcggg aaggcaatct
     5041 aagtaacacc gtctctgaaa attttggcat aagagaaatt gattcaaaac ttatcaatga
     5101 tcattcaagg gaattcattg tgaatggaaa accgatcatg ctgcgcggcg ctgcgtggtc
     5161 gcctgatatt ttccagcgac attcagcgga gagagaagaa caggaattaa ggcttgttcg
     5221 tgatatgaac atgaatattg ttcggtcgga aggaaaactt gaggatgata atttttacga
     5281 cctctgtgat aagtatggtt tgctggtaat gaccggctgg atgtgttgtg gcgcgtggca
     5341 atatcctgaa aactggaacg gcgcagaaag agcagtcgca atggcatccg acagcagcgt
     5401 gatgtattgg ctgcgcaaca aagcatgcgt gatggtttgg ctaaacggaa gcgacatgcc
     5461 gccccgcgat ccctcagtag aaagcgatta tttatcaatc gaaaaatatc tgaagtggcc
     5521 gaatccaacg atatcaactg ccgatgcaag tgaatcaaag gtttccggct atagtggcgt
     5581 aaaaataaac ggtccgtacg attgggtgcc gccgatatat tgggaaacgg attcaaataa
     5641 atacggaggc tcctggagtt ttgcgacgga aatttcgccg gggccttcta ttccgcctta
     5701 tgaaagtttg atcaaattca tcccgaaaga ttccatgtgg tatacgaaca gcgtttggca
     5761 atatcattgc ggcaccatgc aattcggcaa tacgaagatc tttgacaatg cattgaatca
     5821 gcgttatggg aaatcatcgt cgataaatga atatttggca aaggcccaat tgcaaaatta
     5881 tgaaggccat cgcgccatga tggaagccta tgggttaaat aaatataaca ccgcaacggg
     5941 agtagtgcaa tggatgctgt gtaatccatg gcccagttta atatggcaca catatgatta
     6001 ctacttgtat ccggcaggta cttatttcgg gatgaaaaaa tctatggagt cgctgcatgt
     6061 aatgtattca tacaaatcga atgaagtaga tatcatcaat tgtcttctgc aaagattttc
     6121 tggcctaact gtcaaagccg atgtgtacaa tcttgatggg acggtaaaat attctaacac
     6181 cgtttcaacg gacgtagagg cagacggcac gaagcattgt ttcgccattc cacagatcgc
     6241 aggattgtcg gcgacttact ttcttcgtct tgaattgaaa gatgcgaaag gcgcaacgca
     6301 aagtataaac tggtactggc tctcacaaaa acaggatgca ttgcgctggc aaaaatctga
     6361 gtggtactac acgccgcaat ctgatttttc cgatttcact gcattgagca agatgccgaa
     6421 atcaacgctc gatgtaaaat acgctagtaa agaaaaggaa aataagacag aacacactat
     6481 cacgataaca aacacgggta aggcggttgc gttctttgtt cacgtgcgcg cattaaaaga
     6541 taaaaatgca gacgatatct tgccggttat tttttctgat aattacattt ctcttgcccc
     6601 cggcgaaagc agaacgattg aatgcaggta cgaaaacaag tatgcaggca gcgcatcgcc
     6661 gtacatttta acgtcagcgt ggaatcttga tgttgcaaac agcaaggcag aaaataatgc
     6721 aggatttgag aaatgaatgg ataaaaaaaa tccatgaacc aaatctcaag aaacaaaaaa
     6781 agaaaacagg aaggaattcg tgggtaacaa aatcaatgcg gctggcgttt gaagtgctaa
     6841 tttaaaacgc gtttttgcta ttaagtgtag tcccaatgat tgcccaatct tgcaataaaa
     6901 taaagtacat atttcatgaa cgagtctgca cgtctttccc gcgaaggcgg gaatctgtta
     6961 actttagttc atgcaatatg gagggacagt gtacattgcc gcaaaatata attgcaacaa
     7021 gcttgtttac taggagacat tcggcagaat ggaagatgcc attacaactg aaaaacaact
     7081 gaagaatctt gggtggaaag atttatttat tggcctctca aattacttag agcggatgcc
     7141 cggtcggggc cgggcatgac tgcgacatgg ttgccatgtg tactcgcaga aaactaactc
     7201 aaaaaggatt ttcgcaagtc gattttgatc tgcacaacgc gttaatttca aatttttatt
     7261 tttttggatc ttgttttttg gaacttgttg tttgaaattt tcggatcttg ttttttggca
     7321 tttgcgattt cgaaactaaa cagctgcctg cttgcatgaa cgaatattcg ctatcttcgc
     7381 gctgatttt
//
LOCUS       DASQJI010000195         8956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1861446,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000195 DASQJI010000000
VERSION     DASQJI010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8956
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861446"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VEV83_05770"
     CDS             <1..260
                     /locus_tag="VEV83_05770"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44653.1"
                     /translation="NFRLYPNPAQHVFMLELALNESLTAKAQIQMINAQGSAVYTSDA
                     RVYNGQLKKQVTTSSVIVPGVYLVRITIGGELFVGKLIIER"
     gene            complement(697..939)
                     /locus_tag="VEV83_05775"
     CDS             complement(697..939)
                     /locus_tag="VEV83_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44654.1"
                     /translation="MTFRAFLFSGDDKGDIISYQWISRVHSGGSSTATANTPLCAGAA
                     VLESVYFYQYSFPGVIVTNNDGVAFKKNGLSWSVSI"
     gene            complement(965..1038)
                     /locus_tag="VEV83_05780"
     tRNA            complement(965..1038)
                     /locus_tag="VEV83_05780"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1004..1006),aa:Gln,seq:ctg)
     gene            1363..3333
                     /locus_tag="VEV83_05785"
     CDS             1363..3333
                     /locus_tag="VEV83_05785"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44655.1"
                     /translation="MNAAAKTILLFSLLPSITVGAQKNPADLLRIDSLEKALQTQKED
                     TAKVQTLFALVHEFKYSNSDTALYFENTALALATKLNYRIGIARAKRGLSAICADQGK
                     YSEGVKYGNDALNLYTELLSSATVANKENILKGIALSHTLIGHNTFSQGNYPEALKNT
                     FIALNISEKLGDKSGISLNEFNIGNIYLGQHSYSMALKYFHSALNIADQLEDKGSSAY
                     ITASIGLLYFEQGNYGEAIKNYSTALKIAKEINDIHTLQEAYNSLGLLADKQGNYDQA
                     LEYDFAALKLYEETGFNEQIPLIYNSVALVYMKQKKYDDASRSLQKALAYAKEIGSLL
                     YIKLTYENLAAFDSSCGNYKNALRHYQLAVTYRDSLFNEENTKKLVQSQMQYQFDKKQ
                     DSINAMQDKKDVLALAQIKNQKTIRNFSLSGALMIISFGGYSFYRYRRRRKLQNQQEM
                     LNERLRISRELHDDIGSTLGSISIYSEVAKNRSEKNENADEAISKIGVASRELIEKMS
                     DIVWSINPNNESFEQLQNRMQAFAALMLTPRDIQNDFIVDEQVKSIQLTTEERKNIFL
                     IFKEAIHNLVKYAACGKVEIKLSAPDNQFEMIIRDDGKGFDALSFGEGRSQVYNGNGL
                     KNMKVRADDIRAALNIQSQINTGTTIQLVVNI"
     gene            3343..5310
                     /locus_tag="VEV83_05790"
     CDS             3343..5310
                     /locus_tag="VEV83_05790"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44656.1"
                     /translation="MKFILILIFVPYSHLAHPQNKTIDSLQHLLHTQKEDTNKVNTLN
                     KLCVAENNNANYSIGLQYGRDALSISEKMNFKKGKASAYYNLACSYGGQNDQLEARKN
                     YSKALELYEAVNDKQGVAESKLWIGHTFTVLEENYSLALKNYYEALKLFEELNDDENL
                     ASAYQFIGGTWFSYGNLQEASKFFIATLKVSMRMHDSARIAQAYISISGVYTAQENYT
                     KAIEYLIFGKRLFEAMRHRGPIWGVPFCYTTIGNIYERQGDSAGATGNRELAKNKYTG
                     ALNNYFTGLKFWKEINARGDAWSYTSIGNINIKLGNLSIAKSFLEKGLQLSAELSDKE
                     GLNYSYGSLSHLDSMLGNYRQAYEHYKMYILYRDSLVNEENKKKMLQSAMQYHFDKKQ
                     DSIKAAQDKKDIITAAEIKDQKLFRNFSFAGIFLIVSFGSYSFYRYRRRRKLQSQQEM
                     LNERLRISRELHDDIGSTLGSISIYSEVAKNRSQKNENADEAISKIGVASRELIDKMS
                     DIVWSINPDNESFEQLQNRMQSFAAMMLTPRDVQNDFIVDEHLKSIPLTTEERKNIFL
                     IFKEAIHNIVKYAECSKVEIRLLAENDNLEMYIKDDGKGFDVNEFRPDGESLGGNGLK
                     NMKARADDIKAFLNIQSERNKGTTIQLTFKT"
     gene            5332..6684
                     /locus_tag="VEV83_05795"
     CDS             5332..6684
                     /locus_tag="VEV83_05795"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44657.1"
                     /translation="MQNRAIEIFYLLFQGALVFQVLIFAVLYFFTKKKDILYYSLFLL
                     FAAVYFFVNAPYTFFGIPEETVWISNWYDIVNTPLIIVENLFYLLFLKAFFHDVTTDK
                     SVVRVLLITLRIIPLLIALFILLTILRVNSQFIFYTVNMISVIPAAAVAYIILKRKIP
                     FASLVANGLICTIAGTSVTVCMIVLGNNGLHKLFTVGYPLFFIRLGILGDMIFYLAAI
                     LKKWHLQEKQFAVEKIQSLIHERLRISRELHDDIGSTLGSISIYSEVAKNRSEKNENA
                     EEAISKIGVASRELIDKMSDIVWSINPDNESFEQLQNRMQAFAAMILTPRNIHYDFTA
                     GEETKKINLTSEQRKNIFLIYKEAIHNIVKYAECKKVEIKLSRQHDQLEMNITDNGKG
                     FDSRSFEESALHSSGRKGEVYNGNGLKNMKARANHIQAMLNIHSVINGGSKIELRMGI
                     "
     gene            6753..7403
                     /locus_tag="VEV83_05800"
     CDS             6753..7403
                     /locus_tag="VEV83_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44658.1"
                     /translation="MNGIKVIMFDDNDSLRDSISMLLQDTKDFTLVESYSHCIDVIQN
                     IKETQPDVVLMDIDMPGMNGIEGVRLIRKNFPTVQILMLTVFDDEEKVFAAIKAGAGG
                     YILKNAEPKNLLSAISEVYNGGAPMTPAIARKVLYQFQHLQPDKTKEDYHLSSREKEV
                     LASLVDGLSYKMIASKLNITYDTVRAHMKKIYEKLHVTSMTEAVAKAINQKLFSAL"
     gene            7713..8690
                     /locus_tag="VEV83_05805"
     CDS             7713..8690
                     /locus_tag="VEV83_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44659.1"
                     /translation="MKNLKILWAILLLAASLLTGCKKETMDSSLSNQTAASSKLTPPG
                     SRCQLTNLDWGGGAFWHFHYNEKGLADEWIIDNADGFPHNFTMQYDENNRLIGAKDHF
                     NNTVYTNIFKYAGSQLIEQTYTNDVTSETGDKFFTYNKKGDIVREDDIINDVHVNFVY
                     GPMGCIHWDLYFGSYHFLSNDITFEKPNRNPLLSISGIDFGFAFANVPLWDKRQETSD
                     HLVVYDSDNNPFVIFDTDPAQTVMQPAHEDYLSSVNYYDKVNQTITTYTFTYQNCDGQ
                     TEQENLASQPSLPMPAVINKNYRQQMPLVFGSQEQIKEQINKLKIQYEK"
BASE COUNT         2936 a         1810 c         1775 g         2435 t
ORIGIN      
        1 caaatttcag gttgtatcct aatcctgcgc agcacgtatt tatgcttgaa ttagcgttga
       61 acgaatcgct cacggccaag gcgcagatcc agatgatcaa cgcgcaggga agcgctgtat
      121 acacatcgga tgcacgagtg tacaacgggc aactgaaaaa acaagtgacg acatcatctg
      181 tgatcgtgcc cggagtttac ctcgtaagaa ttacgatcgg cggtgaacta tttgtcggca
      241 agcttattat tgagcgataa aaacgatgcg caatagcgca gactccgtcg cttcaatgtt
      301 gtaacttagc ttttcaatca ttcatgctaa atgttctgga actgatttct tattcttact
      361 aaaatacttt agaacgactc cttgtaaacc gaaacgacat gtctatatct gcaaatgcca
      421 tggcttcaaa ttcactagct tcaaatgcga tgggttctaa tgcgctagct tcaaatgcgc
      481 tatccgaaaa tgccttatct caaaatgaac tcaacacaga gataacggtt gcggagaaac
      541 atattaaact aataggcgtt gtacttgtac tgtccgggat tgctatctgg atatggggtc
      601 atactcatcg gcgcaagcat gttgtacaat aactgaatgc cttcgcatta ttaaatacgc
      661 ctggtgcgac cgtgtgtatt tgcgatgcgt tcccaattag atcgacacag accaggaaag
      721 accatttttt ttaaaagcga caccatcatt attggtgaca ataacacctg gaaaagagta
      781 ttggtaaaaa tagactgatt ctagtactgc agcacctgca cacaacggcg tatttgcagt
      841 tgcagtgctg gagccgcccg aatggacacg ggagatccac tggtaagaaa taatgtcccc
      901 tttatcgtcc cctgaaaata aaaaagccct gaaagtcatt cctatcaagg ctcctaaaaa
      961 agactggtta cccgacaagg attcgaacct tgactatcag agccagaatc tgacgtacta
     1021 ccattatact atcgggcaat ggcgggtgca aatgtataaa atttcgccgg ccagtgctat
     1081 aaaaggccca taagaaaatt ctgttcggcg ttatcgtttt gcaatttata atgagccata
     1141 ctcaccgaat gtaatgataa cggcaatttt gcaaaccagc catatccgca ctgcacagga
     1201 aattgtaaac aataagaaca ccatgcgtgc ctgaccaatg ccgcgtctcg gttactgacg
     1261 cgacggccct ggcacagttg tcgttttaat ggactaagcc ggtcatactc ttttttgata
     1321 gaagtaatat ggctaactta ggcaaggaca atcaactgga aaatgaacgc agctgccaaa
     1381 acgattcttt tattttcctt gctgccttca attacagtgg gcgcacaaaa gaaccccgct
     1441 gatctactta gaatagattc gctcgaaaaa gctttacaaa cacaaaaaga agacaccgcc
     1501 aaagtgcaga cactgtttgc gcttgttcat gaattcaaat actctaatag cgacaccgct
     1561 ttgtattttg agaacacggc gcttgccctc gcaacaaaac tcaattatcg aatcggcatt
     1621 gcccgcgcga aaagaggatt atctgcgata tgtgctgacc agggaaaata tagtgaaggt
     1681 gtaaaatatg gtaatgatgc gttgaattta tatacagagc tactctcgtc cgctaccgtt
     1741 gcaaacaaag aaaatatatt aaaaggcatt gccctttcgc acacgttaat tggacataac
     1801 actttttcgc agggtaatta tccggaagca ttaaaaaata cattcatcgc cctgaacata
     1861 agtgaaaaac tcggagacaa aagcggcatt tcattaaacg aatttaatat cgggaatatt
     1921 tacctcgggc aacacagtta ttccatggct ttgaaatatt ttcattctgc acttaacata
     1981 gctgaccagt tggaggataa aggaagtagc gcctacatta cggcttctat cggtcttctc
     2041 tattttgaac agggcaacta tggcgaagcg ataaaaaatt attcaacagc cttaaaaatc
     2101 gcgaaagaaa taaacgatat ccataccctt caggaggctt ataatagcct gggacttctc
     2161 gcagataagc agggaaatta cgatcaggca ctcgaatacg attttgctgc cttaaaatta
     2221 tacgaggaaa caggctttaa tgagcaaatc ccacttattt ataacagcgt agccctggtt
     2281 tacatgaagc aaaaaaaata cgacgatgct tccagatccc tgcaaaaagc attagcgtac
     2341 gcaaaagaga taggcagttt gctatatatt aaacttacgt acgaaaacct cgcagcattt
     2401 gacagcagtt gtggcaacta taaaaatgcg ctgcgacatt atcaactcgc ggttacttac
     2461 cgggacagtc tgttcaacga ggagaacaca aaaaaattag tgcaatcgca aatgcaatat
     2521 cagtttgata aaaaacaaga ctcgataaac gcaatgcagg ataaaaaaga tgttttagcc
     2581 cttgcccaaa taaaaaatca aaaaacaatc cgcaattttt ctctgtcagg agctttaatg
     2641 atcatctcgt ttggcggcta ctctttttat cgctaccgcc gccgcagaaa attgcagaac
     2701 caacaggaga tgttgaatga acgtcttcgc atcagccgcg aactgcacga tgatatcggc
     2761 agcacccttg gcagcatctc tatttacagc gaagtggcga aaaaccgctc agaaaaaaat
     2821 gaaaatgctg acgaagccat ctcaaaaatt ggtgttgctt cccgtgagct catagaaaaa
     2881 atgagtgata tcgtttggag catcaacccc aataatgaaa gttttgaaca attacaaaac
     2941 cgcatgcagg cttttgcagc gctaatgctt acaccgcgcg atattcaaaa tgattttatt
     3001 gttgatgagc aggtaaaaag cattcagcta actaccgaag aaagaaaaaa catttttcta
     3061 attttcaaag aagcaatcca caaccttgta aaatatgctg cgtgtggtaa agtggaaata
     3121 aagttatctg cacccgataa tcagtttgaa atgataatta gggacgatgg aaaagggttt
     3181 gacgctctgt catttggaga gggacggagt caggtctaca acggcaatgg acttaaaaac
     3241 atgaaagtaa gagccgatga tatcagggct gccttgaata ttcaatcaca aataaataca
     3301 ggcacaacta ttcaacttgt tgtcaatatt taattgcaaa agatgaaatt tattttaatt
     3361 ttaatatttg ttccgtattc ccatctggca catccgcaaa acaaaactat tgattcctta
     3421 caacatcttt tacacacaca aaaagaagac accaataaag taaatacgtt gaacaagctt
     3481 tgtgtagccg aaaataacaa cgctaattac tctatcggtc tgcaatatgg cagagatgct
     3541 ttatctattt cggagaaaat gaattttaaa aaaggaaaag catcggctta ttataatctc
     3601 gcatgcagtt atggtggaca gaacgatcaa ctagaagcga gaaaaaacta ttccaaagcc
     3661 ctggaacttt atgaagcagt gaacgacaaa caaggtgtag ctgaatccaa gctatggatt
     3721 ggccacactt ttactgttct ggaggaaaat tactccctgg ctctaaaaaa ttattatgaa
     3781 gcattaaagc tttttgagga attaaatgac gatgaaaatt tggcttctgc ttatcaattt
     3841 ataggaggaa cctggttctc atatggcaac ctacaggaag cgtcgaaatt tttcattgca
     3901 actttaaaag taagtatgcg aatgcatgat tctgccagga ttgcgcaggc atacatttcg
     3961 atcagcggag tatatactgc acaggaaaac tatactaagg ctattgaata tttaattttt
     4021 gggaagaggt tatttgaggc aatgcggcat cgcggaccaa tatggggtgt tccattttgc
     4081 tacactacta tcggcaatat atatgaaagg cagggcgatt cagcaggtgc gacaggaaac
     4141 agggaactag cgaaaaataa atatactggt gctttgaata attattttac aggattgaag
     4201 ttttggaaag aaattaacgc caggggtgat gcctggtcat acactagcat tggcaatata
     4261 aacatcaagc ttggaaacct ttcaatagca aaaagttttc ttgaaaaagg attacagcta
     4321 tccgcagagt taagtgacaa agaaggtttg aactatagtt atggaagcct ttcgcattta
     4381 gacagtatgc tgggaaatta tagacaggct tatgaacatt acaagatgta tattttatat
     4441 cgagatagcc ttgtcaatga agaaaacaaa aagaaaatgt tgcaatcagc aatgcaatat
     4501 cattttgata aaaaacaaga ctcaataaaa gcagcgcagg ataaaaaaga tataatcact
     4561 gctgcagaaa ttaaagatca aaaactattc cgcaattttt ctttcgcagg aatttttctc
     4621 atagtatcat ttgggagcta ctctttttat cgttaccggc gccgcagaaa attgcagagc
     4681 caacaggaga tgctgaatga acgcctgcgt atcagccgcg aactgcacga tgatatcggc
     4741 agcacgcttg gcagtatttc catttacagc gaagtggcga agaaccgctc acaaaaaaac
     4801 gaaaatgctg acgaggcaat ctcaaaaatc ggtgttgctt cccgtgagct tattgataag
     4861 atgagtgata tagtctggag catcaaccct gataatgaaa gcttcgagca acttcaaaac
     4921 cggatgcagt cttttgctgc gatgatgctt acacctcgcg atgttcaaaa tgattttatt
     4981 gttgatgagc atttaaaaag cattccgcta actaccgaag aacgaaaaaa catttttcta
     5041 attttcaaag aagctattca caatattgta aaatatgctg agtgctcaaa agtggaaata
     5101 agactgttag cagaaaatga taaccttgaa atgtatatca aagatgacgg gaagggattt
     5161 gatgtaaatg aatttcgccc ggacggggaa tcgttaggcg gcaatggact taaaaatatg
     5221 aaagcaagag ccgatgatat taaggctttc cttaatattc aatcagaaag aaataaagga
     5281 acaaccattc agctcacatt taagacttga tcttatatta ctgtattgat aatgcaaaac
     5341 agggccattg aaattttcta ccttttattc cagggagcgc tcgttttcca ggtattgatt
     5401 tttgcagtac tttatttctt tactaaaaag aaagacattc tttactacag tttgtttttg
     5461 ctttttgctg ctgtgtattt ctttgtaaat gctccttaca ctttttttgg cataccggag
     5521 gagacggtat ggatttccaa ctggtacgac attgtaaaca cgcccctgat aattgttgaa
     5581 aatctttttt atttgctttt tctgaaagcc ttttttcacg atgtaacaac tgataagtct
     5641 gtagtgaggg tattactgat cacgcttcgc atcattcctc ttttaattgc attattcata
     5701 ttgttaacca ttctgcgagt aaatagccaa ttcatttttt acactgtaaa tatgatatca
     5761 gtgataccag ccgctgcagt agcatatata atactgaaaa gaaaaattcc gtttgcttca
     5821 ctagtagcga atggccttat atgtaccatc gcaggcacaa gcgttacagt atgcatgatc
     5881 gtgctgggaa acaatggtct tcacaagctg ttcaccgttg gctacccgct gttttttatc
     5941 cggcttggta ttttggggga tatgatattt taccttgcag cgattttaaa aaaatggcat
     6001 ctgcaggaaa aacaatttgc cgtagagaaa atacaatctc tcatacacga gcgtctgcgc
     6061 atcagccgcg aactgcatga cgatatcggc agcacactcg gcagcatttc catctacagc
     6121 gaagtggcaa agaaccgctc agaaaaaaat gaaaatgctg aggaagccat ctcaaaaatt
     6181 ggtgttgctt cccgtgaact tattgataag atgagtgaca tagtctggag catcaacccc
     6241 gataatgaga gctttgaaca attacaaaac cgcatgcagg cttttgcagc gatgatactt
     6301 acaccccgaa atattcatta tgattttacc gctggtgaag aaacaaaaaa aataaacctc
     6361 acctctgaac agcgcaaaaa tattttcctg atttacaagg aagctataca caacatcgtc
     6421 aagtatgcgg agtgtaaaaa ggtggaaata aagttgtcac gacaacacga tcagcttgaa
     6481 atgaacatta cagacaatgg aaaaggattt gactcgcgct cctttgaaga gtctgccctg
     6541 catagttccg gcaggaaggg tgaggtctac aatggcaatg gcctcaaaaa tatgaaggcc
     6601 agggctaacc atatacaggc gatgctaaac atccattcag tgatcaacgg aggtagcaaa
     6661 attgagctga ggatgggaat ttgaaatact accaaggttg gtaataggtt ttgcaataaa
     6721 tcacaccaac tttgtagtta atatgctcac caatgaacgg tattaaagtg attatgttcg
     6781 atgacaatga ttccctgagg gattcaatct ccatgcttct gcaggacaca aaagatttta
     6841 cgctcgtgga gtcttattcg cattgcatcg acgtaataca aaatataaaa gaaacgcaac
     6901 ccgatgtagt tttgatggat atcgatatgc cgggcatgaa tggcattgaa ggcgttcgcc
     6961 tcataagaaa aaattttccc actgtccaga tattaatgct taccgttttt gatgatgaag
     7021 aaaaagtttt tgcggccatt aaagccggcg ccggcggtta tattttaaaa aatgccgagc
     7081 cgaaaaattt attaagcgcc atctcagaag tgtataacgg cggcgcacct atgacgccgg
     7141 ctattgcacg caaagtatta taccagtttc agcatttgca gcccgataaa acaaaagaag
     7201 attaccattt aagcagccgg gaaaaagaag tgctcgcttc gctcgttgac gggctttctt
     7261 acaagatgat cgcatccaaa cttaatatca cctacgatac agtacgcgcc cacatgaaaa
     7321 agatatacga aaaactccat gttacgtcga tgaccgaagc cgttgcaaaa gccatcaatc
     7381 agaaactgtt ttcggccttg tagctcctgg ctcatagtcc agcgcttatg gcccgcgatc
     7441 ttatcctttc ggccgataaa tgctaaatgc aagtcgcaaa tcagcaccct ctcaaactct
     7501 cctttgatca tttgcttcgc cacatcgtgc ccttcgcctc cctggaggag gaactgcttc
     7561 cttaattccc aaacgctaaa tcgctaaatc caaatcctaa ttcctaaatc caatatgcac
     7621 tctactacca tatttggtaa ttgtttgcca ctgttattct atcttctttt gttcagttat
     7681 taattatgaa attttttttt aatcaaacta tcatgaaaaa tttaaagatt ctatgggcga
     7741 tactactgct agctgcttca ctgcttaccg gctgcaaaaa agagactatg gattcatctc
     7801 tttctaatca aactgctgcc agttcaaaac tcacgccgcc cggcagccga tgccagctga
     7861 caaatcttga ctggggtggc ggcgcttttt ggcattttca ttacaacgaa aaggggttag
     7921 ctgatgaatg gataattgac aatgccgacg ggttcccgca taattttact atgcagtacg
     7981 atgaaaataa caggctcatt ggcgccaaag atcattttaa taataccgtt tacactaaca
     8041 tcttcaaata tgccggcagc cagttaatcg aacaaacgta cacgaatgat gttacttcgg
     8101 aaacgggaga taaatttttc acctacaata agaaaggaga cattgtgaga gaagatgata
     8161 ttatcaatga cgtgcatgta aattttgttt atggccctat gggctgtatc cactgggacc
     8221 tttactttgg aagttatcac tttttatcca acgacatcac atttgaaaaa ccaaaccgca
     8281 atccacttct ttcgatttcc ggaattgatt ttggattcgc attcgctaat gttcctcttt
     8341 gggacaaaag gcaggaaaca agtgatcatc ttgtcgttta tgatagcgat aataacccat
     8401 tcgtgatttt tgacacagat cctgcccaaa cggtaatgca acccgcgcat gaggactatc
     8461 ttagttctgt aaattattat gacaaggtaa accaaactat aaccacctat actttcacgt
     8521 atcagaattg tgatggacaa actgagcagg agaacctggc ttctcaacct tcacttccga
     8581 tgcctgctgt aattaacaaa aattaccgac agcaaatgcc cctcgttttt ggttcacagg
     8641 aacaaataaa agagcaaata aataaattga aaattcaata cgaaaaatga gctggtagtt
     8701 cgctcttgcc cttgttctta gtatataaga acaaaaataa aaaccgaatc aatcgtttcg
     8761 acaaaaaatt atatggttct cccgcaacct ttcaatagta tatgatagtg atggcaatcg
     8821 agaaaagaat atgctaaata taaataacaa gcagtattaa gatatccgct gatgattgat
     8881 ccttaaagct taaaaacgct acactaagaa gagcggttct taggcaaatt tctttcttca
     8941 aaataaaccg gtcaaa
//
LOCUS       DASQJI010000196         6662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2783110,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000196 DASQJI010000000
VERSION     DASQJI010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6662
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2783110"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1209)
                     /locus_tag="VEV83_05810"
     CDS             complement(100..1209)
                     /locus_tag="VEV83_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HYK44660.1"
                     /translation="MSHLSYKHFTLGVEEEYMVVDPNTRELKSHEQKIVTEGQKIIRD
                     KVKAEMHQAVVEVGTDICQDIDEAFRDVSVLRTTISQIAESLGFWMGASGTHPFSHWE
                     SQLITDHVRYNQIVNELQEAARSNLIFGLHVHVGMEDRKMAVHIANSARYFLPHVYAL
                     STNSPFWEGRSTGYKSFRTKVFDKFPRTGIPDYFESIESYDNYVNLLVKTNCIDNAKK
                     IWWDLRVHPFFNTVEFRICDVPMTINETIAIAALFQAICAKLYKLRAQNLNFIIYPRV
                     LVNENKWRASRYGIDGSLIDFGKEAEVNTRVLIYELLDFVDDVVDDLGSRQAINYVQK
                     MLEHGTGADRQLDVFNRTQNYEAVVDYIHSQFLAL"
     gene            complement(1222..2175)
                     /locus_tag="VEV83_05815"
     CDS             complement(1222..2175)
                     /locus_tag="VEV83_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44661.1"
                     /translation="MKKIGILFGQERTFPQAFIERINSKNVEGIHAEPVRIDKIMQGE
                     PSGYAVIVDRISQDVPFYRAYLKNAALTGTAVINNPFWWSADEKFFNNCLATKIGVPV
                     PKTVLLPSRDLPTDTSDQSFSNLAYPLDWEGIFNYVGFPAYMKPFAGGGWKNVYKLTS
                     MEDFFDKHAETGQLVMLLQEEIVFDEYYRCYCVGGKHVRIMPYEPRNPHHLRYVASFK
                     PSEERLKLMEDIVLRINKYLGYDLNTVELALRDGVPYAIDFCNPAPDADRNSVGEENF
                     AWIVETMANFAIERAQTAVEGRDSLHWGEYVRRSADREALV"
     gene            2299..3114
                     /locus_tag="VEV83_05820"
     CDS             2299..3114
                     /locus_tag="VEV83_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK44662.1"
                     /translation="MESKKPELTNVLIERLSHYSNFLKRDVIADAYLPTEVEDPRRLS
                     LLLINDGQDLPKMPFEEILDKLLQDDKIEPVLCVGIHCGPERKMEYGTAGQKDYKGRG
                     AKANSYTHFVLEELLPLIHQSYRVPFFKDISFAGFSLGGLSALDIAWNHPTQFSKIGV
                     FSGSLWWRSRGYTEGYDDNKHRIIHQQIKQGGFYPWLRFFFECGIMDEKADRNHNGVI
                     DAIDDTLDLIKELRKKGYPDNNIHYLELQDGRHDVPTWGRAFPAFLEWGWGKQ"
     gene            3431..>6662
                     /gene="rpoC"
                     /locus_tag="VEV83_05825"
     CDS             3431..>6662
                     /gene="rpoC"
                     /locus_tag="VEV83_05825"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HYK44663.1"
                     /translation="MAIKKDNRPKANFSKITIGLASPDSILERSFGEVLKPETINYRT
                     YKPERDGLFCERIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIK
                     LVVPVVHIWYFKSLPNKIGYLLGMSSKKLESIVYYERYAVIQPGIREDKGLQVGDLLT
                     EEEYLDIVDNLPKDNQYLPDDDSQKFIAKMGAEAVHDLLARIALDELSYTLRNAAATE
                     TSQQRKADALKRLSVVEAFRDANSRISNRPEWMVMQYIPVIPPELRPLVPLDGGRFAS
                     SDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQEAVDSLFDNSRKSNAVKAEG
                     GRALKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELRMHECGLPKDMAAELFK
                     PFIIRKLIERGIVKTVKSAKKLVDRKEAVVWDILENILKGHPVLLNRAPTLHRLSIQA
                     FQPRLVEGKAIQLHPLVTTAFNADFDGDQMAVHVPLSNAAVLEAQLLMLSSHNILNPQ
                     NGTPITLPSQDMVLGLYYITKGRKSLPENPVKGEGKTFYNLEEVMIAYNERIVDLHAH
                     IKVRTEVREKGELVKKVIETTVGRVMFNQFVPKEVGFINALLTKKNLREIIGDIIKIT
                     DVPKSAKFLDDIKTLGFRMAFKGGLSFSVNDLIVPEIRNEMIEGAKGEVEDIRESYNM
                     GLITNNERYNQVIDIWGRVDMRITESLIFEMSKDKQGFNSVYMMLDSGARGSKTQVKQ
                     LVGIRGLMAKPRKSGSSGSEVIENPILSNFKAGLNVLDYFISTHGARKGLADTALKTA
                     DAGYLTRRLVDVAQDVVITEEDCGTLRGIATSALKDNEDVIESLADRIMGRTSLHDVY
                     DPQTDELIIKAGEEISPDVSKQIDDSGIENVEIRSVLTCESKRGVCVKCYGKNLATGY
                     LAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSASVESSLTAKFDGTIQFDGLRS
                     VPAQNAEGQKIHVVIGRTGEVRIMDMKNDRLLITNNIPYGAVLAVKDGQHVKKADVIC
                     TWDPFNNVVVAEVAGTARFENVIEGITFREESDEQTGHRDKVVIESK"
BASE COUNT         1849 a         1504 c         1554 g         1755 t
ORIGIN      
        1 tgacacgttt gattgttata ttttttcgcc cgcctattag caaaacctgt aaggtttatg
       61 cgacattttt acgttgactt agcactagcc ctttattatt tacaaagcca aaaactgcga
      121 gtggatatag tcaacaactg cctcgtagtt ttgagttcgg ttaaatacgt ccagttgccg
      181 gtcagcgcct gtgccatgtt ccaacatttt ttgaacatag ttgatcgcct gcctgctgcc
      241 aaggtcgtca accacatcat ccacaaaatc gagcaactcg tagatcaaga cacgtgtatt
      301 tacttctgcc tctttaccaa aatcgatcag gcttccgtcg ataccatacc ggcttgcgcg
      361 ccatttgttt tcgtttacca gtacgcgcgg gtaaataata aaattcagat tttgagcacg
      421 cagtttatac agctttgcgc atatcgcctg gaacaaagct gcgatcgcaa tcgtttcatt
      481 gatcgtcata ggaacgtcgc agatcctgaa ctccaccgtg ttaaaaaacg ggtgcacccg
      541 gagatcccac catatctttt tcgcgttgtc aatgcaattt gttttgacga gtaggttcac
      601 ataattatca tagctctcta tactttcaaa ataatccgga atgcctgtac gcggaaattt
      661 gtcaaacact ttcgtacgga aagatttata cccggttgac cggccttccc aaaacggtga
      721 gttggtactc agcgcataca catgcggcaa aaaatatctc gcagagtttg caatatgtac
      781 cgccattttg cggtcttcca ttccaacatg tacatgcagc ccgaaaatca aattgctccg
      841 tgccgcttcc tgcagctcat taacgatttg gttatacctc acatgatccg ttatcagctg
      901 gctttcccag tggctgaacg gatgtgtacc cgaagcgccc atccagaagc caaggctttc
      961 cgcaatttgg gaaatagttg tccgtaacac cgaaacatca cgaaatgcct catcgatatc
     1021 ctggcagatg tcggtgccta cttctacaac tgcctggtgc atttcagcct taaccttatc
     1081 cctgattatt ttttgtcctt ccgtaacgat cttttgttca tggctcttca gttcccgggt
     1141 gttcggatca acaaccatat attcttcctc aacaccgagg gtaaaatgct tgtaactgag
     1201 atgtgacata atttctccgt tttaaactaa tgcttctcta tctgcgctgc gcctcacata
     1261 ctcaccccag tgcaggctat cccttccctc aacagctgtc tgggcccttt cgatcgcgaa
     1321 gttggccatt gtctcaacga tccatgcaaa attctcttct ccaacgctgt tacggtcggc
     1381 atcaggcgcc gggttgcaaa agtcaatggc atatggcacg ccatcacgca atgccagctc
     1441 aacggtgttg agatcatagc caagatattt gttgatgcga agcacaatgt cttccatcaa
     1501 tttgaggcgt tcttccgatg gcttgaagct ggcgacataa cgcaagtgat gcgggttgcg
     1561 tggctcgtat ggcataatgc gcacgtgttt tcctcccaca caatagcaac ggtaatattc
     1621 gtcaaatacg atctcttcct gtaataacat aaccagctgt cctgtttccg catgcttgtc
     1681 gaagaagtct tccatgctgg tcagcttgta cacatttttc catccgccac ctgcaaacgg
     1741 cttcatatag gccgggaatc caacataatt aaaaatgcct tcccagtcga gaggataagc
     1801 gaggtttgaa aacgattggt cggatgtgtc agtgggcaga tctctcgatg gtagcaaaac
     1861 agttttcgga accgggacac cgatcttagt cgcaaggcag ttgttgaaaa atttctcgtc
     1921 ggcactccac caaaacggat tgttgatcac cgccgttccg gttaaagcgg cgtttttcag
     1981 ataagcacgg taaaaaggaa cgtcctggct gatccgatca acgatcacgg catagccgct
     2041 gggctcgccc tgcattatct tgtctatgcg aacaggctcg gcgtgaattc cctccacatt
     2101 tttactatta atcctttcga taaaggcctg cggaaatgtt ctttcctggc cgaatagtat
     2161 cccaattttt ttcatgtcag ttggtttaaa aaattttttg aatcaccatt caaattaaag
     2221 aaactaattg caattgacgt gcgcttcaaa tgaaaaaatg tgagactcaa tttttcagtt
     2281 tgctatattt gaagctttat ggagagcaag aagccggaat taacaaatgt tctgatcgaa
     2341 cgtctttccc attattcaaa tttcttaaag cgggatgtta ttgcagacgc gtacctgcct
     2401 accgaggttg aagacccgcg acgactgagc ttgcttctga taaacgatgg acaggactta
     2461 ccgaaaatgc cgtttgaaga aattcttgac aagcttttgc aagatgacaa aatagaaccg
     2521 gtgctgtgtg ttggaattca ttgcgggcca gagagaaaaa tggagtatgg caccgccggt
     2581 cagaaagatt ataagggtcg cggtgcaaag gctaactctt acacacattt cgttcttgaa
     2641 gaactattgc cgcttataca ccaatcttat cgggtgccct tttttaaaga catctccttt
     2701 gcgggatttt cgctcggcgg attaagcgcc cttgatattg catggaatca tcctacccag
     2761 ttttcaaaaa ttggagtttt cagcggttcg ctgtggtggc gtagccgtgg ttacacagaa
     2821 ggatatgacg ataacaagca tcggatcatc catcagcaaa taaagcaggg aggtttttac
     2881 ccgtggctaa gattcttttt cgaatgtggt ataatggacg agaaagccga ccgcaaccac
     2941 aacggagtta ttgatgcgat cgatgacacg ctggacctga tcaaagaatt acggaaaaaa
     3001 ggctatcccg ataacaacat ccattatctc gaactacaag acggccggca tgacgtccca
     3061 acctggggaa gggctttccc cgcattcctg gagtggggat gggggaaaca gtagctgcgt
     3121 tcaactcatt atccacacac tgtaaaattt tatttttttg aaaattgcca aaaattttat
     3181 aatgcttcgg ttttttgtcc cacatttttc gctcaattat attacctttg ccgccttatg
     3241 catttttgga gtattgaatc gttctcagcc ttcagcttct tttatcaatt accgtcgcca
     3301 aaatagtctt ttttagagcc ctcacacagt tagggctaaa catgttgcta tgcgacgcaa
     3361 ctgaagctta agtcatggcc tgcagccggt tacataccca aaaaaaatta tcataaactg
     3421 aattatacat atggctatca aaaaagacaa tcgccccaaa gccaattttt cgaagatcac
     3481 tatcggtttg gcctctcccg acagtattct tgaacggagc tttggagaag ttttgaaacc
     3541 ggaaactatc aattaccgca cttacaaacc cgaacgcgac ggtttgtttt gcgaaaggat
     3601 ctttgggccg gtgaaagact atgaatgtgc ctgcggaaag tataagagaa tcaggtataa
     3661 agggatcgtc tgcgaccgct gcggtgttga ggtaacagaa aaaaaggtgc gccgcgaaag
     3721 aatgggccac attaagctgg tggtgccggt agttcatatt tggtacttca agagccttcc
     3781 aaataagatc ggctacctgc tcggaatgag ttccaaaaaa ttggaaagca tcgtatacta
     3841 cgaaaggtac gcggtaattc agccgggcat acgcgaagac aagggtttac aagtcggcga
     3901 cttgctaact gaagaggaat atttggacat cgtggacaat cttcccaagg acaaccaata
     3961 tcttcctgat gatgattcgc aaaaattcat cgccaagatg ggcgccgagg cagtccatga
     4021 tctgcttgcc cgtattgcgt tggatgagct cagctataca ttaagaaatg ccgctgctac
     4081 agaaacgtcg cagcaacgta aggctgatgc cttaaaacgt ttgagtgttg ttgaggcctt
     4141 ccgagatgcg aacagccgca tcagcaaccg gccggaatgg atggttatgc aatacatccc
     4201 cgttattccg ccggaattaa gaccgctggt tcctttggat ggcggacggt ttgcgtcatc
     4261 tgatctgaac gacttatatc gccgcgttat catccgtaat aaccggctta aacgattgct
     4321 tgagatcaaa gcgcctgaag tgatcctgcg taacgaaaaa cgtatgctgc aggaagctgt
     4381 agacagcctg ttcgataata gccgtaaatc aaatgcagtt aaggccgaag gcggacgtgc
     4441 attaaaatct ttaagcgatg tattgaaagg caagcagggg cgcttccgtc aaaacctgct
     4501 aggtaaacgt gttgactatt caggccgttc ggtgatcgtg gttggtcccg aattgagaat
     4561 gcatgaatgc gggcttccga aagacatggc agctgaatta ttcaaaccgt ttattatccg
     4621 taaactgatt gaaagaggta tcgtaaagac cgtaaaatct gcgaagaaac tggtcgacag
     4681 aaaagaagcg gtcgtttggg atatccttga aaatattttg aaggggcacc cggtattatt
     4741 aaaccgcgcc ccgacgcttc accgtttatc tatccaggca tttcagccca ggttagttga
     4801 aggcaaggcg atccagttgc atccacttgt tacaactgca ttcaacgccg actttgatgg
     4861 ggaccagatg gccgttcacg tgcctttaag caatgccgcc gttttagaag cgcagttatt
     4921 gatgttgtct tctcacaaca tccttaaccc gcaaaacggt actccgatca ccctgccttc
     4981 gcaggacatg gtactggggc tttactatat aaccaagggg agaaaaagcc tgcccgaaaa
     5041 tccggtgaag ggcgaaggaa aaacattcta taacctcgaa gaggtgatga tcgcttacaa
     5101 tgagcgcatc gtagacctgc atgcccacat caaagtaaga actgaggttc gggagaaagg
     5161 agaactcgta aagaaggtca tagaaacaac cgttgggcgt gtaatgttca accagtttgt
     5221 gccgaaagaa gttggattta tcaatgcgct gctgaccaag aagaacctgc gcgagatcat
     5281 tggcgacatc atcaaaataa cagatgttcc aaaatccgca aagttcctcg acgatattaa
     5341 aacacttggc ttccgcatgg catttaaggg cggactcagc tttagcgtga atgatttgat
     5401 cgtacctgag atcaggaatg agatgatcga aggcgcaaaa ggtgaagtgg aagacattcg
     5461 cgagagctac aacatgggcc ttatcactaa taacgaaagg tacaaccagg tgattgatat
     5521 ctggggccgc gttgacatgc gtatcacgga gtcattgata tttgaaatgt cgaaagacaa
     5581 acaaggtttc aattcggttt acatgatgct tgactctggc gcccgcggat ctaagacgca
     5641 ggtaaaacag cttgtcggta tcaggggatt gatggcaaaa ccaaggaaaa gtggttcatc
     5701 gggatccgaa gtaattgaaa acccgatcct gtccaacttc aaagcaggat tgaacgtgtt
     5761 agattatttc atttcaacac acggtgcaag aaaaggtttg gccgataccg cattgaagac
     5821 agcagatgcc ggttatctaa cccgtcgttt agttgacgtt gcgcaggatg ttgtgatcac
     5881 cgaagaggat tgcggaacac tacgcggtat tgcaacttct gcattgaaag ataacgaaga
     5941 cgtgatcgaa tcgcttgccg atcgcatcat gggacgtact tcattgcacg atgtttacga
     6001 tcctcaaacg gatgaattga tcattaaagc aggtgaagaa atttcgccgg atgtttctaa
     6061 acagatcgat gattcgggaa ttgaaaatgt agaaatacgc tccgtactta cttgcgaaag
     6121 caagcgcggg gtctgcgtaa aatgttacgg taaaaattta gctaccggat acctcgcaca
     6181 aaaaggagac gcggtaggaa ttatagcggc gcagtctatt ggcgaaccgg gaacgcagct
     6241 tacgttgcgt accttccacg tgggtggtgt tgccggatct gcatctgttg aatcttcgtt
     6301 gactgcaaag ttcgacggga cgatacagtt tgacggtttg cgatcagtac ctgctcaaaa
     6361 tgcagaagga caaaagatac atgtcgtgat cggtcgtacc ggtgaggttc gtatcatgga
     6421 tatgaaaaat gaccgcctgc ttatcactaa caacatccct tatggtgcgg ttctcgcagt
     6481 aaaggacgga cagcacgtga agaaagccga tgtgatttgt acgtgggatc cgttcaacaa
     6541 tgtagttgtg gcagaggtag caggtacagc tcggttcgaa aatgttattg aggggattac
     6601 gttccgtgaa gagtctgatg aacaaaccgg ccaccgtgac aaagtggtta ttgaatcaaa
     6661 ag
//
LOCUS       DASQJI010000197         2508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_18531,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000197 DASQJI010000000
VERSION     DASQJI010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18531"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /locus_tag="VEV83_05830"
     CDS             complement(<1..572)
                     /locus_tag="VEV83_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="HYK44664.1"
                     /translation="MDRVIKKKKWTTKRIITISVIAGIILLIGASYYYTSGGSKLNVE
                     TERITISEVKKGTFQENIPVNGMVLPQTTIYLDAMEGGRVEERYVDDGAMMKKGEPIL
                     RLSNTDLQLNLVQQETQVYNLLTQMQISRNAAQQNTVEKLNQMTDVESQLKEAERIYN
                     LDKDLYAKKAIGFQEYKKAENDYNYYKQKH"
     gene            complement(603..788)
                     /locus_tag="VEV83_05835"
     CDS             complement(603..788)
                     /locus_tag="VEV83_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44665.1"
                     /translation="MKNKFERNGLIPRLILFVNAVFILAMIFFNTTAHKCSRQEPCAN
                     TKKLSVDALNSISIKLM"
     gene            1114..2475
                     /locus_tag="VEV83_05840"
     CDS             1114..2475
                     /locus_tag="VEV83_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK44666.1"
                     /translation="MSLRNASVLVIDDDPDVLIAVRLLLKTEVKKVVTEKNPENLPSL
                     LRETNFDLVLLDMNFKSSINTGNEGLYWLKRIKELNSSVAVIMITAYGDIDLAVRSLK
                     EGATDFILKPWHNEKLLANIEEIIQKNKHAVNGTSKTDASGSIIGSELLGQSEPMMNI
                     FFKVEKIAPTDANILILGENGTGKDLIAKAIHQKSLRAKQPFIKVDVGALTETLFESE
                     LFGHKKGAFTDAREDRVGRIEAANGGTLFLDEIGNITLQQQAKLLSVLQNRQVIRLGT
                     NQPIPVDIRLICATNVPFHELANENRFRKDLIYRINTVEITLPPLRSRKEDIMLLAKH
                     FARQYAVKYRKHAIELDRSAIEKLGQYPFPGNVRELQYTMERAIIMSDSEVLSEKDLL
                     FSPLEATVAPEIEQDDFKLSTIEKNTILRVIEKHNGNITKAARELGLTRTALYRRLSK
                     YDI"
BASE COUNT          706 a          543 c          552 g          707 t
ORIGIN      
        1 ttgtgtttct gcttataata attgtaatcg ttctctgcct ttttgtattc ctgaaaaccg
       61 atcgcctttt ttgcgtaaag gtctttatcc aggttgtata tgcgctccgc ctcttttaac
      121 tggctttcca catcggtcat ctggttcaat ttttcaacgg tgttttgttg cgccgcgttg
      181 cgggatatct gcatttgcgt caaaagattg tacacctgtg tttcctgttg tacgaggttc
      241 agttgaaggt cggtatttga tagccttaga ataggctcgc cctttttcat catcgccccg
      301 tcatccacat atctttcttc aacacggcca ccctccattg catcaagata aattgtagtt
      361 tggggcagta ccataccgtt cacaggaatg ttttcctgga aagttccttt ttttacctcg
      421 ctgatggtga ttcgctccgt ctcaacgttc aatttcgaac cgccgcttgt ataataataa
      481 ctggccccga tcagtaagat aattcccgcg attaccgaaa ttgttatgat cctttttgtc
      541 gtccactttt tctttttaat gaccctgtcc acaagtaaga tttattgttt tattttaaaa
      601 atttacatga gtttgatcga gatcgaatta agcgcgtcaa cacttaattt ctttgtgttg
      661 gcgcaaggct cctgccggct gcacttatgc gccgtagtat taaaaaagat cattgctaaa
      721 atgaacacag cgtttacaaa caggattagc ctggggatga gcccgtttct ttcgaatttg
      781 tttttcatcc gtatgttgtt tattgttttc agatttggag cggcacttac atgagcgcca
      841 tagcacctta atggtttgtg ccaataagta agaaagcgaa gtgccagttt ctaagtttgt
      901 tgaaaaacaa ccaattagaa tactttcagc cgccttcatt gttcgcttgt gtaacaaaag
      961 gtgtccgctt tcgatacagt aggtgtacgc gtgaaaaaag caccaattca aaaccaatat
     1021 tttagcttta tggtatggca aatgattatt ggttagtctg aaaataggca gccgccaatt
     1081 tttgattcac atgtttttaa atatttgaga aaaatgagct taagaaacgc gtccgttctt
     1141 gtaattgatg atgatcccga cgtgctaatt gcggttaggt tgttattaaa aacagaagta
     1201 aagaaagttg taaccgaaaa gaatcccgaa aatcttccct cgttgttgcg ggaaacaaat
     1261 tttgacctcg tcttgctgga tatgaatttt aaatcgtcga tcaataccgg caatgaggga
     1321 ttatactggc tcaaacgcat caaggaactg aactcgtcag tcgccgtaat aatgatcacc
     1381 gcctatgggg acattgacct ggcggttcgt tcactaaaag agggagcaac cgactttatc
     1441 ctcaaaccgt ggcacaatga aaaattgctt gccaacatcg aagaaataat tcaaaagaat
     1501 aagcacgctg ttaacgggac ttctaagacc gatgcctcag gcagtatcat cggcagtgag
     1561 ttgttgggcc aaagcgagcc gatgatgaac atctttttca aagtggaaaa gatagcgccc
     1621 accgatgcga atattttaat attgggtgag aatggtaccg ggaaggacct gatcgcaaaa
     1681 gcaattcatc aaaaatcctt gcgggcaaaa caaccgttta ttaaggtcga cgttggcgct
     1741 ttaaccgaaa ctttgtttga aagtgaattg ttcgggcata aaaagggtgc tttcaccgat
     1801 gcgcgcgaag accgggttgg ccggatagag gccgcaaatg gcggtacgtt attccttgat
     1861 gaaatcggca atatcacgct gcaacaacag gcaaagctgc tgagtgtgct gcagaaccgg
     1921 caggttatac ggctcggcac caatcaaccg ataccggttg acatacgatt gatctgtgca
     1981 acgaacgttc cttttcacga actggcgaat gaaaaccgtt tcagaaagga ccttatttac
     2041 cgcatcaaca ccgtcgagat cacactgcct cccctgcgct cgaggaaaga agacatcatg
     2101 ctgctggcaa aacattttgc aaggcaatat gccgttaaat acaggaaaca tgcgatcgag
     2161 ctcgacagat cggctattga aaagttaggc caatatcctt tcccgggcaa tgtgagagag
     2221 ctgcaataca ccatggaacg tgcgatcatt atgagcgaca gtgaagtgct tagcgaaaag
     2281 gaccttttgt tctcgccgct tgaggctacc gttgcccccg agatcgaaca agacgatttc
     2341 aaactgagca cgatcgaaaa aaacacgatc ctccgcgtga tagaaaaaca taacggcaac
     2401 ataacgaagg ctgccaggga acttggctta acgagaacag ctttatacag gagactcagc
     2461 aaatatgata tataatcgcc cgggcatcag gatagtcatt cgcatcct
//
LOCUS       DASQJI010000198         1929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_632631,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000198 DASQJI010000000
VERSION     DASQJI010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632631"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VEV83_05845"
     CDS             complement(<1..391)
                     /locus_tag="VEV83_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HYK44667.1"
                     /translation="MKKLIVVISAAFLVRCSHHINPSFSPLGGGGLPLFDKEGHRGCR
                     GLMPENTIPAFLKAIDLGVTTLEMDAVITKDGQVLISHEPFFNHEITTKPNGDTLRES
                     EDRSFNIYQMNYDEVKTYDVGLKVNPRF"
     gene            complement(388..1020)
                     /locus_tag="VEV83_05850"
     CDS             complement(388..1020)
                     /locus_tag="VEV83_05850"
                     /inference="COORDINATES: protein motif:HMM:NF016207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HYK44668.1"
                     /translation="MYDLPHFKAEHFKEVLAFMHAHPFITLCGCDHENHPVATHVPVI
                     IEEKDEKIFLHAHVMRKQDHTVAFSHNPNVLAIFSGAHTYVSAGWYENKQTASTWNYQ
                     AVHAKGILRWADESSLHGLLTKLTEKFENNPHSESLVQKLNEEYVRNLMKAIIAFEIE
                     ITSVEHVFKLSQNRDEKSYENIIQHLAEGDDDAKEVASTMKQRQDKVFPK"
     gene            complement(1103..>1929)
                     /locus_tag="VEV83_05855"
     CDS             complement(1103..>1929)
                     /locus_tag="VEV83_05855"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYK44669.1"
                     /translation="DDSAQLETLAPGTEATIAVTGNMTRDVPAKNVMGWVEGTDPKLK
                     NQFIVLSAHYDHLGVAAQPKMEEGKLDSIYNGARDNAIGTTAVIDAARYFAQHPPKRS
                     VLFIAYTAEELGLVGSQYFSANPPIPFNQLVYNLNIDNASYNDTTIVSVVGLGRTSAD
                     NDIKNACAAYGLTAMPDPAPEQGLFDRSDNVSLAIKGIPAPTFGLGVRKFDSTITNRY
                     HQLSDEVGNFNLSYAMKYINAFVLAAKNIADNKTQPTWVAGDKYEAAWKELFKKDL"
BASE COUNT          478 a          457 c          401 g          593 t
ORIGIN      
        1 gaaaacgagg attaaccttc aaaccaacat cgtatgtttt cacttcatca taattcattt
       61 gatagatgtt gaatgatcgg tcttcgcttt cgcgcaaagt atcgccgttc ggcttcgtag
      121 ttatctcgtg attaaaaaat ggctcatgac ttattagaac ctgtccatcc tttgtgatca
      181 ccgcgtccat ctcaagtgtg gtaacgccca ggtcgatcgc ttttagaaaa gcaggaatgg
      241 tattttctgg cattaatccc ctgcatccac gatgaccttc tttgtcaaat aacggcaagc
      301 ccccgccgcc taaaggggag aaagaaggat taatatgatg actgcatctt accaaaaagg
      361 cagcgctaat tacaacgatc agttttttca tttaggaaag actttgtcct gcctttgttt
      421 catggtcgag gcaacttctt ttgcatcatc atcgccttcc gctaaatgct gaataatgtt
      481 ttcgtaactt ttttcgtccc tgttttgact caatttaaaa acatgttcaa cagacgtaat
      541 ctcgatctca aaagcaatta tagctttcat caggtttctc acatattcct cgtttagttt
      601 ttgcacgagc gattcggagt gcgggttgtt ctcgaacttt tcggtgagtt tcgttaacag
      661 cccatgcaaa gaactttcat ctgcccacct taaaattccc ttcgcatgta cagcctggta
      721 attccaggta cttgctgtct gcttattttc ataccagccc gcactcacat atgtgtgcgc
      781 tcctgaaaat atggcaagca cgtttggatt atggctaaac gccaccgtgt ggtcctgttt
      841 acgcatcacg tgtgcatgta aaaagatctt ctcatccttt tcctcaatta taacaggtac
      901 atgtgttgca accgggtgat tctcgtggtc gcaaccgcaa agtgttatga aaggatgtgc
      961 atgcatgaag gcaagcactt ctttgaaatg ttcagctttg aaatgaggaa gatcgtacat
     1021 gcggcccgtt tgctttaata aagaggaaat ttatcgcatc taatttaaac aatgatgctc
     1081 aactaacgct gttacacttc cactacaggt ctttcttaaa cagctctttc caggcggcct
     1141 catatttatc accggctacc caggtgggct gcgttttgtt atcagcaata ttttttgccg
     1201 cgaggacaaa cgcgttgata tacttcatcg cgtagctcaa gttaaaattg cctacttcgt
     1261 cgctgagttg atggtaacga ttcgtgatcg ttgaatcaaa ttttctcacg cctaacccga
     1321 aggtgggtgc agggatacct ttgatggcaa ggcttacatt gtcgcttctg tcaaataaac
     1381 cttgttccgg tgccggatcg ggcatcgcag ttaacccgta cgcagcacac gcattcttaa
     1441 tatcattatc ggccgacgtc ctgccgaggc cgacgactga tacgatcgtt gtgtcattat
     1501 aactcgcatt atcgatgttc agattataca ccagttgatt gaaaggaata ggcggattcg
     1561 cagaaaaata ctggctgccg accaaaccga gttcctcggc agtgtatgca ataaaaagca
     1621 ccgacctttt tggcggatgc tgcgcaaaat accttgcagc atcaatcact gctgtcgttc
     1681 cgatcgcatt atcccttgct ccattataga tgctgtcgag ttttccttct tccatttttg
     1741 gttgcgctgc cacgcctaaa tgatcataat gcgcggataa tacaatgaat tggtttttta
     1801 atttaggatc tgtgccctct acccatccca tgacattttt tgcagggaca tcccttgtca
     1861 tgttacctgt tacggcgatc gtggcttcag tgccgggagc gagcgtctcc aattgtgcgc
     1921 tgtcgtctt
//
LOCUS       DASQJI010000199         1924 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_18588,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000199 DASQJI010000000
VERSION     DASQJI010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18588"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..128)
                     /gene="ffs"
                     /locus_tag="VEV83_05860"
     ncRNA           complement(29..128)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VEV83_05860"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(163..1449)
                     /locus_tag="VEV83_05865"
     CDS             complement(163..1449)
                     /locus_tag="VEV83_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5103 domain-containing protein"
                     /protein_id="HYK44670.1"
                     /translation="MKRTSFLALLTLLFFLRLPAQQPDRIYMANIHTVKLFVGADQDA
                     YPIIPLNAATVMQLHFDDLDATVKNYNYTYVLCDADWKPVDLSPFDFLTGFTQGRLGQ
                     YRSSSVAKTRYVHYQALLPEPSCMPKRSGNYLLKVYLNGDTSKLAFARRLLVLDNVLP
                     VGAKVTEPYNSQLFLTHQKVQFTVDKTKVNIMNAPQQLKVVVLQNFRWDNAVWGLQPT
                     FMRGNIYEYSSDINCVFPAGREYRWADLRNFRFQSERVDSVDFNAKPFDLWLHPDPQR
                     TNLRYVTYVDLNGFYHVDATDVNNPWWQGDYANVHFEFVPQNAQAFQNKQVYIIGELA
                     TGNCDNAECQLIFNPDKQIFEKTLLLKQGYYYYTYVTKESNNKKNLTETADTEGNYSE
                     TENTYTILVYYRSLSDRADELVGAAIIDSKNMVRGQ"
     gene            1646..>1924
                     /locus_tag="VEV83_05870"
     CDS             1646..>1924
                     /locus_tag="VEV83_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HYK44671.1"
                     /translation="MQRRKFMQQSALASASILAASSVKANNPQNNSDTFTLNYAIHDG
                     MFAETAGKDFLDQIQFAYDNGFRAIEDNGMMDRPADEQKKIGDLLAKLN"
BASE COUNT          532 a          449 c          422 g          521 t
ORIGIN      
        1 ccctttaggg gacgggggcg aataaaaaaa aaggcaggct gattacatcg caccgctaca
       61 accgcctact cttgctgcct tccggccctg ggagggttca gcaggagctg gtcgtgtaag
      121 acctgccgcg gcaaaaataa cgattaaaag tttaaagaaa tcctactgtc cgcgcaccat
      181 gtttttgcta tcgataatgg cggcccctac cagttcgtcc gcgcggtcgc tcagcgagcg
      241 atagtaaaca aggatcgtat acgtattctc cgtttcagaa taattaccct ctgtgtctgc
      301 ggtttcggtt agattttttt tattgtttga ttccttagtt acatatgtat agtaatagta
      361 tccttgtttc aacaacaaag tcttctcaaa tatttgctta tccggattaa aaatcaactg
      421 gcactcggca ttgtcgcagt tgccggtcgc aagttcgccg atgatatata cctgcttgtt
      481 ttgaaacgcc tgtgcgtttt gcggcacaaa ttcaaaatgc acatttgcat agtcgccctg
      541 ccaccacgga ttgtttacat cggttgcatc cacatggtaa aatccattca gatcaacata
      601 ggtaacatag cgaagattgg tacgttgggg gtccggatgc agccacagat caaacggttt
      661 ggcattgaaa tcaacgctgt cgacccgttc actctggaac cgaaaatttc taaggtccgc
      721 ccagcgatat tcccggcccg ccggaaacac gcagttaata tcactgctat attcataaat
      781 attgccacgc ataaacgttg gttgaagtcc ccatactgca ttgtcccaac gaaaattttg
      841 aagaacaacg acttttaatt gctgcggagc gttcataata ttcaccttcg ttttgtcaac
      901 ggtgaattga actttttgat gcgttaaaaa taactgtgag ttatagggct ctgtgacctt
      961 tgcgccaaca ggaagcacgt tatccagcac gagcaaccgc ctggcaaacg caagtttgga
     1021 tgtgtcgcca tttaaataaa ctttcagcaa gtaattaccg cttcgttttg gcatgcagct
     1081 cggttcgggc agtaaagcct ggtagtgcac atacctcgtc tttgcaaccg aggaagaacg
     1141 gtattgtcct agcctgcctt gcgtgaaacc agtcaagaaa tcaaacggac tcagatcaac
     1201 aggcttccag tcggcatcgc acaggacgta agtgtaatta taatttttca cggtcgcatc
     1261 aagatcgtca aaatgcaatt gcattactgt agccgcattc aaagggatga tcgggtaagc
     1321 gtcctggtca gcacccacga acagcttgac ggtatgaata ttcgccatgt aaattcggtc
     1381 gggttgttgg gcagggagtc tgagaaaaaa gagcagggtt aataaagcaa ggaacgatgt
     1441 tcttttcatt cttttgataa aagtaattgc tcaaatgtaa tgaagatttt tgggtggccg
     1501 gcttttgatc atatggcatc gttcattgcg tcgcactacg ttcatcgttc agtttttcat
     1561 ggcaacttaa aacatccaaa atgtagtacc cttttacaca ccgtttctaa tcgcatctcc
     1621 tgtatcttag tttcaaatct ccgtcatgca acgcagaaaa ttcatgcagc aatccgcttt
     1681 agccagcgct tccatcttag cagcttcatc tgtcaaagca aacaacccgc aaaacaattc
     1741 ggatacgttt acactgaact atgcaattca tgatggtatg ttcgcagaaa cagccggcaa
     1801 agattttctc gatcaaattc aattcgcata cgacaacggc ttccgggcta tcgaagacaa
     1861 cggcatgatg gaccgtcctg cggatgagca gaaaaagata ggagacctgc tcgcaaagct
     1921 aaac
//
LOCUS       DASQJI010000200         2854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1554506,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000200 DASQJI010000000
VERSION     DASQJI010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554506"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(406..1443)
                     /locus_tag="VEV83_05875"
     CDS             complement(406..1443)
                     /locus_tag="VEV83_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HYK44672.1"
                     /translation="MKSIHGTRSYNMKMIMQLVATYLWALFFGVNCTYAPGNMKEQAD
                     VLTLTAKIALRNISGRIDHLAFDSANDLAFIAALGNNTIEVVNINTKQVVHTIKGLHE
                     PQGVAFIPLMQRLVVANGDNGDCIFYETKNYSALNTIKLKGDADNVRYDAETNLLYVG
                     YGNGGIAIIDATQMKVVNSIPLDGHPESFQLDKKQNRIYINVPDADEIEVADLSSHKV
                     IAKWKNTNASSNFPMALDAQHNRLFIGCRNPATLRMINTETGKDITSIKCSADADDVF
                     YYNNLVFVSAGKGYIDVFETSDNVLNQINHIETSSGARTSLLLSTEKKFLLAAPARGG
                     NAAALWTYKIL"
     gene            complement(1412..1864)
                     /locus_tag="VEV83_05880"
     CDS             complement(1412..1864)
                     /locus_tag="VEV83_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HYK44673.1"
                     /translation="MKWITRERPKIDRIACPWLIKNFVDNNAEFIYVPKEDVFNKAKE
                     LDAIPYDIPGAEYSHYGDECTFDYIVKKHKLQDEAIHQIAIIVRGADTDNFQLAPQAA
                     GLWAISAGLSYNYKDDHEQLAIGMKIYDALYSWAKYVQSEKHTWNPVL"
     gene            complement(2137..>2854)
                     /locus_tag="VEV83_05885"
     CDS             complement(2137..>2854)
                     /locus_tag="VEV83_05885"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HYK44674.1"
                     /translation="DLKVKVGDFSVAPGLALGTWVGIINMGDHSMMMGDLVLLDAEVP
                     KVINKLMEENLQVTAIHNHLINETPAIKYIHYHGEGDPVTLAQEIKAVLQVTATPLTP
                     PASQAQTQTIDWSKVTAILGTTGKQNGMLLQYVFPRNEKTMESGMEMPPSMGMATAIN
                     FQMDGNRAAITGDFVMLADEVNPVVKALTDNGIMPTALHSHMLHDEPRLFMMHFWAVG
                     DPEKLATGLKAALDKTNSKY"
BASE COUNT          760 a          602 c          546 g          946 t
ORIGIN      
        1 ggttgctatt tataactctt ttggaggaat ggtaaaagaa ctacaacaag taaatcttgt
       61 aaaaggtttc aacaaccttt catttaacgg ctccaacttt gcatcgggtg tttatatgct
      121 cgaggtaaat tttggtgatt caaagattct gagaaaaata gtaaaaacca attgatcctc
      181 ttcccgagtt tttttccgcc gcaatgtctt tggccagcgt cttgtgcgcg gcaataacat
      241 tgcggtttca tttgtgagcg ctcgttgggt cgctatccct tatccacata aaactgtcac
      301 agcataattt tccttgataa actgcagcgg cctgaagccg caatgtttct gctatcacgc
      361 gtcgtcaatg aggagacatt gcacggaaag aaggaaaata ccgatttaca atattttgta
      421 tgtccataaa gcagcagcat tcccgcctcg tgccggcgcc gcaaggagga atttcttttc
      481 cgttgaaagt aataaagacg ttcttgcacc gctgctggtt tcgatgtgat taatttggtt
      541 tagtacattg tcacttgtct cgaatacatc aatatatcct ttacctgctg aaacaaagac
      601 aagattatta taatagaaaa catcatctgc atctgctgaa cattttattg atgttatatc
      661 ttttcctgtt tctgtgttta tcattcgcaa ggtagcaggg tttctgcagc caataaacaa
      721 tcgattatgt tgcgcatcca atgccattgg aaaatttgat gaggcatttg tgtttttcca
      781 tttcgcaatt accttgtgtg atgacagatc tgcaacttcg atttcgtctg catccggaac
      841 atttatataa atcctgtttt gttttttatc aagctgaaaa ctttccgggt gaccatccag
      901 cggaatagaa ttaaccacct tcatttgtgt tgcgtcaata atggcaatgc caccgtttcc
      961 ataaccaaca tacagcagat tagtttcagc atcatatctt acattatccg catcgccttt
     1021 tagttttatc gtatttaatg cactataatt ttttgtctca taaaaaatac aatcgccatt
     1081 atcgccgttt gcaacaacaa gtctttgcat taatggaata aaagcaacgc cctgcggctc
     1141 atgaagacct ttgatggtat gaactacctg tttagtattt atgtttacaa cttcaattgt
     1201 attgttgcct aacgcggcaa taaaagcaag atcatttgca ctatcaaaag caagatggtc
     1261 tattcttccg ctaatgtttc gcaaggcaat ttttgcggtc aaggttagaa catctgcttg
     1321 ttccttcata ttaccaggag cgtaagtaca attaacgccg aaaaacaagg cccataaata
     1381 agtggcaaca agttgcatga tcattttcat attataagac cgggttccat gtatgctttt
     1441 cactttgcac gtatttagcc caggagtata atgcatcata tattttcatt ccaatagcta
     1501 attgttcatg gtcatcttta tagttgtagg agagacctgc agaaattgcc cataagccag
     1561 cggcctgggg tgcaagctga aagttgtctg tgtcggcacc acggactata attgcaattt
     1621 gatgtattgc ttcatcctgc aatttgtgtt tcttaacaat gtaatcaaat gtgcattcgt
     1681 cgccgtagtg tgaatactct gcgcccggaa tatcataagg aatcgcatct aattctttcg
     1741 ctttattaaa cacatcttct ttgggaacat atataaattc cgcattgttg tctacaaagt
     1801 ttttaattag ccagggacag gcaattctgt caattttcgg ccgctcacgt gttatccatt
     1861 tcatttattg aacgttttag ttatagaaaa tctattcacc gtattctctg ttttcggtgt
     1921 ttaaaatcca tcatgtgctt agtggtcaat aatgtgttgt gcaattgatt ctaaagtgcc
     1981 agcctgtttt tcttcgtgta ttgtttgtgg cttcgggact tggtggttca aaagatcaga
     2041 aaccacggag gcaccacgca ccaggtttca ccaagctgaa catcttccga tctttaattt
     2101 ttaatagcac agcatgtatg aataaaattt gccacgttag tactttgaat ttgttttatc
     2161 cagtgctgct tttaaacctg tcgctaattt ttcaggatca ccgactgccc aaaagtgcat
     2221 cataaatagt cgcggttcat catgcaacat atggctatga agcgccgtcg gcataatgcc
     2281 attatctgta agcgctttta caaccggatt tacttcatcc gcaagcatca caaagtctcc
     2341 tgtaatcgcg gcgcggttgc cgtccatttg aaaattaatt gctgttgcca tgcccattga
     2401 cggaggcatt tccattccgc tctccattgt cttttcattt cttggaaaga catactgaag
     2461 caacatgcca ttttgtttcc ccgttgtgcc aagtattgca gttactttac tccaatcaat
     2521 ggtttgtgtt tgtgcctgtg aagcaggtgg tgtaagcggc gttgctgtta cttgcaacac
     2581 tgcttttatt tcctgcgcta atgtaacggg atccccttca ccatgataat gtatgtattt
     2641 aattgctggt gtttcgttga taagatggtt gtgtattgcc gttacttgaa ggttttcttc
     2701 cattaattta ttaatcactt tcggcacttc tgcatccagc aaaacaaggt cgcccatcat
     2761 catagaatgg tcgcccatat ttatgatgcc aacccatgtg cccaatgcaa gcccgggtgc
     2821 aacagaaaag tcgccgactt ttactttcag atcg
//
LOCUS       DASQJI010000201        14469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2936684,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000201 DASQJI010000000
VERSION     DASQJI010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14469
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2936684"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VEV83_05890"
     CDS             <1..489
                     /locus_tag="VEV83_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44675.1"
                     /translation="IWGANVSRGVDSSLLCFQDFFPTFGDMANISSSNYGTLDGISFY
                     PQIAGSKATPRSWIYNYYRPTEEGDSTLTQWAQNHTYKLELTGGAYTLRYVTTNAEVT
                     NATPEQQTIRDSLASVITSMHAEKYFIPSKKGGRNKGDKAGNAAKGNKGNKVNKDNDD
                     ND"
     gene            1026..2396
                     /locus_tag="VEV83_05895"
     CDS             1026..2396
                     /locus_tag="VEV83_05895"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK44676.1"
                     /translation="MKKHTFFFMAILFAFAGCRKDIEPVNERLSASVSQQEATSSRPN
                     IILIVGDDIGYEVPTCDGGQSYLTPTLDKLANQGVRLTQCHGSPLCSPSRFMLFTGKY
                     NFRNYTKWGIMDLGQKTIANMFRDAGYKTLIAGKWQFDGGDNSIRTLGFDNYLVWEPY
                     TGQDEMTDGSRYKNPVLYQNGAFLPTEQTQGKYGDDMFTSYILQFLDTNYNKPDPFFV
                     YYPMALGHKPFCPTPDDPQFAGWNPDLGISDSTFFPSMVKYMDKKIGLILNRVNTLGI
                     ANNTIILYVGDNGTSGEIYSLFQGTLIRGGKSHPTEYGTHVPMIAWSPNRFPAGIVNN
                     SIVDFTDFLPTLATLANIAQPVTYGVLDGVNFAPQLYGQTGLPRAQIFCHFDPHPGHS
                     KISRWVQNTQYKKYDSVTTTADKNKFYNIVLDPNENNPIPSTARTSSEKQLSKSWDLI
                     LQSMHN"
     gene            complement(2393..2599)
                     /locus_tag="VEV83_05900"
     CDS             complement(2393..2599)
                     /locus_tag="VEV83_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44677.1"
                     /translation="MSFCLVAEMGRKKTGNHYLSTDIELIFAALNFYQPDPGSHLFTM
                     AAPGIAFSYNYFVFCVKLFKPVPA"
     gene            2604..2834
                     /locus_tag="VEV83_05905"
     CDS             2604..2834
                     /locus_tag="VEV83_05905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44678.1"
                     /translation="MKTIFFLIVAITLLAACAKPEYYARTVKKEATCRFMQMHPIHDT
                     LNGDLRLSYVMKYHAALYNDAIVQCNCAESKN"
     gene            complement(2890..3531)
                     /locus_tag="VEV83_05910"
     CDS             complement(2890..3531)
                     /locus_tag="VEV83_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44679.1"
                     /translation="MEYSIAIVDDHTLIADALAEIIESFSKYKVLYTASNGKLLMEKF
                     KLAKNVPDVVLLDINMPEMDGFETAKWLVEQHPAVLILALSMHEDEQTLIKMIKSGAR
                     GYLLKNVHRTELEKALDALVSKGFYYPDWATSKILHNIQDENPSASIKLSDREIEFLN
                     YAATELTYKEIGEKMFCSPRTVESYRDALFEKLNLKTRVGLVVYAIKNNIIKQ"
     gene            complement(3535..5790)
                     /locus_tag="VEV83_05915"
     CDS             complement(3535..5790)
                     /locus_tag="VEV83_05915"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44680.1"
                     /translation="MDRSEKQLRIGVTGHRKLTRTQCDAIEPLITKAIDNIIFYHQNT
                     FGRLFENVFTTSLAEGADSLFARVAVEHFDCTLKILLPFQEEEYIKDFETDELKNEFK
                     DLLHHEKVADIQCLQRLGSKPREDLYFDAGKNIVDENDYIIAVWNEEAANGNGGTGDI
                     AAYAINLGKNLLVINPFSELPEIIGSYLPEFTREPYNAFAANATNGKLLMNFFKMYDN
                     AAVANQLFSDHIRENCFNVGLAATLILATEIAFYSFGISNNLSAVSLMLNIAVVLCII
                     TIVSMLQKEKRSSFHENYLSNRYIAERLRVDDLFFKCGFYPAKSESEIVYTYVADFKS
                     LSPLIIINKFIQLCCFSSSVVAEKKQFADALIQEQSNYHQKRVERLSKQTERNSKVTK
                     ALLVVFITVMLLVIAYGIYKIVPGNDSGELSASIIGRAFFSSFVFLLLCIPAWMLKLV
                     AKKHFGEWQKLISQSEYMLSYLEQMSLKVHSAEDIKELQNVLNALNENIYIENLEWEM
                     FMLNKDEMMIYKNRKIEQAKRAELMNEKFAREVLNTRLEIQQQTMQHIGREIHDNVGQ
                     KLVLASLYMQQLDAGNENLLSEKKIKSITNIIDESLSDLRSLSRSLTETVNPHTSLYH
                     LVENECKKVNAAGSCKVEFEANAQQIDLSQAVKNFVLRILQEFLQNSLKHAACTEIKI
                     SMQNEETGLTVSSLDNGHGFTINGKKYAGIGLQNIRKRAEIIGADLKIESAPGEGTRM
                     RLFIPSQKLNA"
     gene            complement(5838..8435)
                     /locus_tag="VEV83_05920"
     CDS             complement(5838..8435)
                     /locus_tag="VEV83_05920"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK44681.1"
                     /translation="MIKLLTRLSCLGLMQMISVAAWSQDCGTATIDSAIYLYNIGRFD
                     EAINDLNGCLNSKHAFSFDQRIQAHHLLALSYLAIDSAAKADESIEELLRLKSNFEPI
                     FSDPDRFVKELAMIKARPNGITISSVSKKSEDVRLAPATAIVITQEEMLQRGYKDIVD
                     VLKDIPGFDISVYYGQTYANIYQRGLRTQFSDRTLILVDGVEDNDLWSYFADISQQYP
                     ITNVKRIEVIYGPSSTMYGPNAFSGVINIITKEADEFLNHNHSLGVHATAGLASFDTK
                     YFDGTVAWKKGIFSMTLTGRVYYSDRPDLSSQAWWDFDPSIYDSVGYASLLAVRGDGK
                     EYLTDNDLPDSTKWYVLSGDNVKLTDSGEELARKLDKAAYDQSLHGQSVSTFENKAKA
                     SYINAKMNIGDLALGFVSWEKEEGAGTTYTDRVASVIGTKWYPSHKYLYLSYNKPINQ
                     KLLFSTFINYRIHTIQNGSSVSHLYNYANGDLELKDLAAETPAYFATKYYYEQSKQFR
                     SEFKILYTQSENFYLIGGVELRNSELQGYYLTSSTSRPQENGIYSDSLPGGNAFDVND
                     IGVYAQGQYRSKNKFGFTVGGRLDYNQIRQDEGLGYTFSPRVVVDKIYKDWVYKIIFS
                     TGVENVSNFTKYNGVGTLVGNPDLKPESIYNYEISVSNKISGALLADVDVYYSNVRNT
                     VRAVSLDPTVRNGPRHNINVGDFNIWGIQSNLYYTSEKFQLSVNYSYCYGVETKDSFT
                     LAHGYNSLKVADIATNKINAIVNYVFMKHYNFNFRGNYVSGKQAGEGTTVPQNDISLF
                     PGYFLAGIAISARDLFRVNGMTIQFCCNNILDKNYYGPGIGASAGKNVPGSILQMGRN
                     FSFSVGYEF"
     gene            complement(8439..11465)
                     /locus_tag="VEV83_05925"
     CDS             complement(8439..11465)
                     /locus_tag="VEV83_05925"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44682.1"
                     /translation="MSLTQTSNPFVGLRPFESDESLLFFGRQQQTLELLQRLHENHFV
                     AVVGSSGSGKSSLIRAGLIPALKAGYLVDDRDRWMIAGFKPGQSPLNNFAAAILDQLN
                     ASNTHSELATFMRKIKEEGADAIIELLKPLWEERRTNTFFLIDQFEEVFRFAKGIAGI
                     DKIDEANDFVNIMLELSERKELPIYIVITMRSDFIGDCARFFGLPEAMNQSQYLVPRL
                     NRVQLKSVIENPIKLYGAKINPSLTARLVNDLHLTQDELPVLQHALMRTWDVWRKKAD
                     AETAIDTNDYLQTGTMEHALSQHAEEAFAELSERQKYICEVMFKALTDKESDARGIRR
                     PQLLKDIAMSAQATTGEVMEVINVFRREGRAFLTPSASVILSEDSVIDISHESLMRIW
                     ERLITWVDEENQSKQIYLRLSQAAELHEKGLGSLWRNPELELALNWKRDNAPNQGWAK
                     RSNNLFDTAMLFLEKSRLQVEAEIKEKERSQKQRLQRARIAAVLFSFVAIAALLLAAY
                     AFRQKKEANNQTALAIKKTREALEQQNIALAQRKIADSNRELALQQKLLAQENEQQAV
                     EQKQIADAEKQKAVNSKLDALHQQQIAQEQKKYAEQQTTIAETNAAEAKKQQQNAEQQ
                     TFVANDEKQKSNKLRDLAESRNLANESIILLNENRVDSSKSVALRAYDLNKINDGPDQ
                     NSDIYNALQNNWARSINNKNQYDIHKLPVRCISGTAANNVIFTADESGMLYQSSITSN
                     GLQKLAAYPIKEPVRALSASPDGRKIIVATATGNGTVLTSSEGRMAMASVFKFSGIPK
                     KMCFVDNENFIVLSSQGIWKYRLSDLTHPSILNDATLSALTVGRKGTLYIASGDHVKI
                     YRDWDQLIGDSSLSSQRFDSRVTSLEVDKNEQYIAAGTYNGYVWINNLSNGYDQWHRA
                     LHLSSVNDLKFANVDNGKIQLAAASADQTIKLIDVTSILQKGGKEDIITLRGHTKWIY
                     ALYYTPDGQWLFSTSEDDKVIAWKPTMNGLYQALQK"
     gene            complement(11469..12974)
                     /locus_tag="VEV83_05930"
     CDS             complement(11469..12974)
                     /locus_tag="VEV83_05930"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HYK44683.1"
                     /translation="MAYIPGYTYDIFISYAHVDNETIFGQRDGWIEQFYKNLNLLLAK
                     RMGRMDTIKIWWDNKKLDGSRLFDESIKEGIRQSAIMLSIVSPGYLASEYCMSELQLF
                     HKKSQQEATGLKVGDRSRILNILLNNIPYTQWPAELGGTTGFHFHDAVQSGEFGDPID
                     FNHPHFTTKMKELRDSVLALCERFHNVHSVLPLTAHAEQQTRENFTIFFGEVADTLRS
                     ARKRTISDLEKKGFNIIYGVPPPDDAEAHEQRVKDELKKTELAVHLLDQYPGRDIPGS
                     DDQWYSQKQAELALQFAKSKIVWVPAELDFESVEDEKYKIFLQELETGNRSEGSFEYI
                     RGVKSTLSQEVADIAAILKQEHERKKAKGKISVLLDTHFTDQVYAMDVGKALLENDIQ
                     AFINPQEDDPRKNINLLAERISHVSKLIFFYGKVSRDWVLERMSAALQVIVTNNYPID
                     DFFIYLAPPRKDPNEISLKQRFLKVSVIDNSTNTNLDTSVLNTFLKNLKGE"
     gene            13380..13691
                     /locus_tag="VEV83_05935"
     CDS             13380..13691
                     /locus_tag="VEV83_05935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44684.1"
                     /translation="MKTTLIAENVEPAQVRFTAERTQKRMTRISPFLLLVLFLLVWFP
                     YSIISSGNLFSAWLIIIPFLIANVSLADFAIWNYFGGKKKLLIWVSEAVISALILYWL
                     F"
     gene            14245..>14469
                     /locus_tag="VEV83_05940"
     CDS             14245..>14469
                     /locus_tag="VEV83_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44685.1"
                     /translation="MKTSNTYAIFIAFFLFTACQTNSSNMNTSSADSTQNDSSSKTEL
                     IPPAKNFQATIDGKRTDLYTLKNGNMQVAIT"
BASE COUNT         3867 a         3386 c         2978 g         4238 t
ORIGIN      
        1 atttggggcg caaacgtgtc gcgcggtgtt gattcgagct tgctgtgctt ccaggatttt
       61 ttcccaacgt tcggcgacat ggcaaacatt tcctcttcga actatgggac cctggacggg
      121 ataagttttt atccgcagat cgccgggtca aaagcaacgc cgagaagttg gatatacaat
      181 tactatcgcc ccacggaaga aggggattca accttaactc aatgggcgca aaatcacacc
      241 tataaacttg aacttaccgg cggggcatac acccttcgtt acgtaaccac gaatgccgag
      301 gtaacaaatg caacacctga acagcaaacg atacgggact cactggcatc tgtaataaca
      361 tcgatgcatg cagaaaaata tttcatacca tcgaagaagg gcggcagaaa taagggagat
      421 aaagcgggta acgctgcgaa aggaaataaa ggcaacaagg ttaataaaga caacgacgac
      481 aacgattaaa ttttcgaaac cgttccgcag caagaaagag ctcattcgga tgatggctct
      541 ttttttattt gtactctctt ttcattttca agagctgatc aaaacatggt gaacaatgct
      601 tttaacacca atcgttcgcc tttagcccaa cactagtaat aatagaggcg tagggctttt
      661 cgcaatcggt ttaaagatgt gctgcacatc aaagggtttt catcttcttt aggaacaacc
      721 gcaacacgca tcatgaatcc tggttacacc aggcaaaaag gtttatccaa agaaatggct
      781 gtctttcaag acaatatgct ttgaaactca aaactactgt ttcgatcttc cctgacgtat
      841 tccgtcaaat gacgcaaaaa aaatcggtgt tatgcgaacg aaagacaggt aaccacacat
      901 tgatgtcgcc tgtcctgaaa tgcatttttg tgttgtgatg cgaaagagaa tgcatcacgg
      961 ttttttccgg aaaaaaatat ccctcgcccc agttcacaaa ttcatcaaac taaaaattga
     1021 ttacgatgaa aaagcataca tttttcttca tggccattct atttgcattc gcaggatgca
     1081 gaaaagatat tgaaccggtt aatgaaagat tgtcggcgag cgtgtcgcag caggaggcaa
     1141 cctcatcgcg tcctaatatt attttgatcg tgggcgacga catcggctat gaagttccca
     1201 catgcgatgg cggccaatct tatctcacgc ccaccttaga taagttggca aatcaaggtg
     1261 tccggttaac gcagtgtcac gggagcccgc tttgttcccc ctcacgtttt atgttgttta
     1321 ccggtaagta caatttccgc aattatacaa aatggggaat tatggacctg gggcagaaaa
     1381 caattgccaa tatgttccgc gatgcagggt ataaaaccct catcgccgga aagtggcagt
     1441 ttgatggtgg cgataactct ataagaacac ttggattcga caattatctc gtatgggagc
     1501 cgtataccgg ccaggatgaa atgacggacg gttcgaggta caaaaatccg gtgctttatc
     1561 aaaacggagc tttccttcca acagagcaaa cacagggcaa atatggagac gatatgttca
     1621 cgagttacat ccttcagttc ctggatacca attacaacaa accagaccct ttctttgtgt
     1681 actatccgat ggcccttggg cataaaccat tttgtcctac acctgacgat ccgcagtttg
     1741 ccggatggaa tcctgacctt ggtatcagtg attcaacttt ttttccttcc atggtaaaat
     1801 atatggataa aaagatcggc cttatcctga accgcgtaaa tacacttgga atcgccaaca
     1861 acacgatcat tttgtatgtg ggcgacaatg gaacttcagg cgaaatttat tcattgttcc
     1921 agggaacact catcagggga ggaaaaagcc accctactga atatggtaca catgtgccaa
     1981 tgatcgcgtg gtctccaaac aggtttccgg ccgggatcgt gaacaacagc attgttgact
     2041 ttaccgactt tcttcctacc ctggcaacac ttgcaaacat tgcacaaccg gtaacctatg
     2101 gcgtattgga cggtgtaaat tttgcgcctc aattatacgg acaaaccggg ttgccaaggg
     2161 cccaaatatt ttgccacttt gatccacatc ccggacacag taagatttcc aggtgggttc
     2221 aaaataccca gtataaaaaa tatgactcgg ttacaactac cgccgacaag aacaaatttt
     2281 ataacatcgt tttagatccg aatgagaaca accccattcc ctcaaccgca cgcacaagca
     2341 gcgaaaaaca actgagtaag tcgtgggatt tgatcttaca aagcatgcac aactaagcgg
     2401 gtaccggttt aaacagcttc acgcaaaaca caaaataatt gtaactaaac gcaatacctg
     2461 gagcagccat cgtgaaaagg tggctccccg gatcaggctg ataaaaattc aatgctgcga
     2521 aaatcaattc tatgtccgtc gacaaataat gattgcccgt tttttttctg cccatttctg
     2581 ccaccaaaca aaaactcaaa gcaatgaaaa caatattttt tctcatagtc gcaataactc
     2641 tactggcagc atgcgcaaaa ccggagtatt atgcaagaac tgtaaagaaa gaagcgacct
     2701 gcaggttcat gcaaatgcac ccaattcatg atacgctaaa tggcgatcta cgcttatcgt
     2761 atgtgatgaa atatcacgcg gcgctttaca acgatgcaat tgtccaatgt aattgcgcag
     2821 agtctaagaa ttgaatttat acgcagagta cgacggttaa aaatattccg caacccggat
     2881 gtaattgatt tactgtttaa ttatgttgtt ctttatcgca tacactacca accctaccct
     2941 tgtttttaaa tttagttttt caaacaaagc atcacgataa ctctcaaccg ttcgcggact
     3001 gcaaaacatt ttttcaccga tctctttata cgttagttct gtcgccgcat aatttagaaa
     3061 ttcaatttca cggtcgctaa gttttatcga agcagacgga ttctcgtcct gaatattgtg
     3121 taatatcttg ctggtcgccc agtcgggata ataaaaccct tttgacacaa gtgcatccag
     3181 ggctttttcg agctcggtgc gatgtacatt tttcaagaga tacccccgtg caccactctt
     3241 gatcatcttg ataagcgttt gctcatcttc gtgcattgac aaggcaagga tcagcaccgc
     3301 cgggtgttgc tcaacaagcc attttgcggt ttcgaacccg tccatctcag gcatattgat
     3361 gtcgagcaaa acaacatccg gtacattttt cgccagctta aatttctcca ttagtagttt
     3421 cccgtttgat gcggtgtaga gtaccttgta ctttgaaaaa ctttcgatga tctctgcgag
     3481 cgcatctgcg ataagcgtat gatcatcgac tatcgcaata ctgtattcca tatattaagc
     3541 atttagtttt tgagacggaa taaataaacg catgcgtgtt ccttcacccg gggcgctctc
     3601 tattttaaga tctgcgccga ttatctccgc acgctttctt atgttctgca acccgatgcc
     3661 tgcatacttt ttaccattga tcgtaaagcc gtgcccgtta tcaaggctgc tcacggtaag
     3721 acctgtttcc tcgttttgca tggaaatttt tatttcagtg catgccgcat gttttaaact
     3781 gttttgcaaa aactcctgca ggatgcgcag gacgaaattc ttaacggcct gggacagatc
     3841 gatctgctgc gcgtttgctt caaattccac tttacaggaa ccagcggcat ttactttttt
     3901 gcattcgttt tctaccaggt ggtaaaggct tgtgtgcggg ttaaccgttt ccgtgaggct
     3961 ccttgagaga ctccgcaaat cagacagcga ttcatcaatg atatttgtga tcgattttat
     4021 tttcttttca gataacaaat tctcattgcc ggcatccagt tgttgcatat acaatgaagc
     4081 caacaccaat ttttggccta cgttatcatg aatttcgcgc cctatgtgtt gcattgtttg
     4141 ttgttgtatc tccagtcgtg tgttcaaaac ttcacgagca aacttttcgt tcatcaattc
     4201 tgcccgtttt gcctgttcga tctttcgatt tttatagatc atcatttcgt ctttgttaag
     4261 cataaacatt tcccattcga ggttttcgat gtaaatattt tcattgagcg cattcaatac
     4321 attctgcagc tctttaatgt cttccgcgga atgaaccttt aacgacatct gctcaagata
     4381 acttaacatg tattcagatt gtgagatgag tttctgccat tcgccaaaat gcttttttgc
     4441 caccaacttt aacatccatg ccggaatgca caaaagaaga aatacgaagg atgaaaaaaa
     4501 agctctgccg atgatcgagg cggacaattc tccgctgtcg ttaccgggca cgatcttata
     4561 gatcccatac gcgatcacca acaacatcac ggtgatgaac acaaccaaga gtgcttttgt
     4621 aacctttgaa ttgcgttcag tttgttttga aagccgctca actcttttct ggtgatagtt
     4681 gctttgctcc tgtatcagtg catcggcgaa ttgtttcttt tcagcgacca cggaactgga
     4741 gaagcagcaa agctggatga atttattgat gatgatcaaa ggagacaaag atttgaagtc
     4801 ggctacatac gtgtacacga tttcgctctc gcttttagcc ggataaaatc cgcatttaaa
     4861 aaaaagatca tcaaccctta gccgttcggc gatataacgg ttgctcaagt aattctcatg
     4921 aaaggagctt ctcttctctt tctggagcat cgacacgatg gttattatac agagcacgac
     4981 tgcgatattc aacataagcg acacggccga aagattgttg ctgataccaa agctgtaaaa
     5041 agcaatttcg gttgcaagga tcaatgttgc cgcaagtcca acattaaaac agttctccct
     5101 tatgtgatcg gaaaatagct ggtttgcgac ggcagcgtta tcgtacatct taaaaaaatt
     5161 catgagcagt ttgccgttgg ttgcgttggc cgcaaaagca ttgtatggtt ccctggtgaa
     5221 ttccggcaga tatgaaccaa ttatctcggg aagctcacta aatggattta ttacgagcag
     5281 atttttccca aggttgatcg catacgctgc gatgtcgccc gtgccgccat tgccattcgc
     5341 cgcctcctca ttccacactg cgatgatgta atcattctca tctactatgt tcttgccggc
     5401 gtcaaaatac aaatcttcgc gcggcttcga accaagtcgc tgcaggcatt gtatgtctgc
     5461 aactttctca tgatgcagca aatccttgaa ttcattcttc aactcgtcgg tttcaaaatc
     5521 cttgatgtat tcttcttcct gaaatggaag caggatcttt aaagtgcaat caaaatgttc
     5581 aacagcaacg cgtgcaaaca ggctgtcggc gccctcggcc aaagacgtag taaaaacgtt
     5641 ttcaaaaagg cgaccaaaag tgttctgatg ataaaaaata atattatcga tcgctttggt
     5701 gatcaaaggt tctatggcat cacactgtgt ccgggtaagc tttctgtggc cggtaacgcc
     5761 tatacggagc tgtttttctg atctgtccat cctcttaatt acttaaaact gtcagcaagt
     5821 ttttgttcgt catccagtta aaattcatag ccgacgctga aagaaaagtt gcgacccatt
     5881 tgcaagatgc tgcccggaac attttttccg gcggacgctc ctatacccgg accataataa
     5941 ttcttatcaa gaatattatt gcagcaaaat tgaatcgtca ttccgtttac acggaaaaga
     6001 tcgcgggcgc ttatcgctat gccagctaag aaatatccag ggaaaaggct gatatcattt
     6061 tgaggaactg ttgttccctc tcctgcctgt ttaccactta cgtaattgcc ccggaaatta
     6121 aaattgtagt gcttcatgaa aacatagttg acgattgcat ttatcttatt ggtagcgatg
     6181 tcagcaactt tcaggctatt gtatccgtgt gcgagcgtaa aagagtcttt tgtttccact
     6241 ccgtaacaat atgaatagtt cactgatagc tgaaacttct cagaagtata atacagattg
     6301 ctctgaatgc cccaaatatt aaaatcaccg acgttgatat tatgtcgcgg tccgttcctt
     6361 actgtagggt caaggctaac agcccgcacg gtatttcgca cattagaata ataaacatct
     6421 acatcggcaa gaagagctcc cgagatttta ttgctcacag aaatttcata attataaatt
     6481 gattcgggtt ttaaatccgg gttgcctacc agcgttccca caccgttata cttcgtaaag
     6541 ttggacacat tttcgacccc ggtactaaag atgatcttat atacccaatc cttataaatt
     6601 ttgtcaacaa caacgcgtgg gctaaacgtg taaccgagcc cttcatcctg tcgtatttga
     6661 ttatagtcca accggccacc aaccgtgaag ccgaatttat ttttgctacg gtattggccc
     6721 tgcgcataca caccgatatc atttacatcg aaagcgtttc cgcccggcaa actgtctgaa
     6781 tatattccgt tttcctgtgg cctggaagta gaagatgtta agtagtaccc ctgcaattcg
     6841 ctgttcctga gttcaactcc cccaatcaga taaaaatttt cgctctgggt atataagatt
     6901 ttaaactctg accgaaattg ttttgactgt tcatagtaat actttgttgc aaaataagcc
     6961 ggagtctctg cagcaaggtc cttcaactca aggtcaccgt ttgcataatt gtaaaggtgc
     7021 gaaacgctcg aaccattttg gatggtgtgg atcctgtaat ttataaaagt tgaaaacagg
     7081 agtttttgat tgattggctt attataactt aggtacaaat atttatgtga aggataccat
     7141 ttagttccta ttacagatgc aactctgtcg gtatacgtgg tcccggcacc ctcttctttt
     7201 tcccacgaaa cgaatccgag cgccaggtcg ccaatattca ttttggcgtt gatataagac
     7261 gccttcgctt tgttttcaaa agtcgataca ctctgcccat gcaaactttg atcatatgca
     7321 gctttgtcga gcttccttgc cagctcttca ccggagtcag taagcttaac gttgtcgcca
     7381 gacaaaacgt accatttggt tgaatccggc aggtcattat cggttagata ttctttacca
     7441 tctcccctaa cagccagcag agacgcatat cccacgctat cgtatattga aggatcgaaa
     7501 tcccaccacg cttgtgaaga caaatccggc cggtcagaat aataaaccct tcccgtcagc
     7561 gtcatcgaaa aaatgccttt tttccaggcg acagtgccat caaaatattt ggtatcgaaa
     7621 ctggccaaac cagcggtagc atgaacaccc aacgagtggt tatgatttaa aaactcatcg
     7681 gcctctttag tgattatgtt tatcacaccg gaaaatgcat tagggccgta catggttgaa
     7741 gatggcccat agatcacctc aatccttttt acgtttgtga tcggatattg ctgtgaaata
     7801 tcagcgaaat aactccacag atcattatct tctacaccgt ccaccagtat taaagttctg
     7861 tctgaaaact gagttcgtaa accgcgttgg tatatattgg catacgtttg accgtaatag
     7921 acggaaatgt caaaacccgg aatgtctttc aagacgtcta caatatcctt atacccacgc
     7981 tgcagcatct cttcctgcgt aatgactata gccgtcgccg gcgcgagacg aacatcttcc
     8041 gatttcttgg acactgaaga aatagtgatg ccgtttggtc tcgcttttat cattgcgagt
     8101 tctttgacga aacgatccgg atcactgaat ataggttcaa aattgctttt caaacgaagg
     8161 agctcttcta tgctttcatc ggcctttgcc gccgaatcga tcgcgagata agaaagcgcc
     8221 aataaatgat gagcttgtat tctttgatca aaagaaaatg cgtgtttgct gttcaaacag
     8281 ccgtttaggt cgttgatagc ttcgtcaaac cggccaatat tatacaggta gatcgctgaa
     8341 tcaatagtgg cggtcccaca atcttgcgac catgccgcaa cagaaatcat ttgcattaat
     8401 cccaggcaac ttaatcgggt aagcagtttt atcatatttt atttttgcaa agcctgatat
     8461 aaaccgttca tcgttggttt ccatgcgatc accttgtcat cttcacttgt tgaaaacagc
     8521 cattggccgt ctggtgtata atacaaggcg tatatccatt tcgtatgccc gcgcaacgtg
     8581 atgatgtctt ccttgccgcc cttttggagt atcgatgtta catcgatcag cttgatggtt
     8641 tgatcggcgc ttgcagcggc tagctggatc ttgccattat caacgttcgc gaacttcagg
     8701 tcatttacgc ttgataaatg caacgcgcgg tgccattgat cgtatccgtt actcaaattg
     8761 tttatccaga cgtagccgtt gtaggttcct gcggctatgt attgctcatt tttgtcaact
     8821 tctaaactcg taaccctgga atcaaaccgt tgggatgaca acgaagaatc gccaatcaac
     8881 tggtcccagt cccggtagat ctttacgtga tctcctgatg cgatgtacag ggtgcccttt
     8941 cttccgacag tcaatgcact gagggtggca tcgtttaaga tcgaaggatg agtgagatca
     9001 gacagccggt atttccaaat tccctggctg cttaacacga taaaattttc gttgtcgaca
     9061 aaacacattt ttttcggaat tccggaaaat ttaaaaacgg atgccatcgc catgcgacct
     9121 tcagaagatg taaggactgt tccattgcct gttgctgttg ccacgataat ttttcggcca
     9181 tccggggacg cggacaaagc ccgaaccggt tcctttatag ggtatgcagc tagcttttgc
     9241 aaaccattgc tggtgatcga cgactggtaa agcatgccgc tttcgtctgc cgtaaaaata
     9301 acattgttgg ctgccgtccc cgaaatacag cgcaccggaa gcttatgaat gtcgtactga
     9361 tttttgttat taatacttcg tgcccaatta ttttggaggg cattgtatat atcgctgttc
     9421 tgatcaggcc catcatttat cttgttgaga tcgtaggctc ttaaagcgac gctcttactt
     9481 gaatcaacgc gattctcatt taacagtatg atggattcgt tggcgagatt ccggctttca
     9541 gcaagatccc tgagtttatt ggatttttgt ttttcatcgt tggcaacgaa tgtttgttgc
     9601 tctgcatttt gctgttgctt cttcgcctcg gcggcattcg tttctgcgat cgttgtttgt
     9661 tgctccgcat attttttttg ctcctgtgca atttgctgct gatgcagcgc atccagtttg
     9721 ctgtttaccg ccttttgttt ttccgcgtcg gcgatttgct tttgctccac agcctgctgt
     9781 tcattttcct gcgccaacaa tttttgttgc aacgcgagtt cccggttgct gtcggcgatc
     9841 tttctttgag caagcgcaat attttgctgc tccaaagctt cgcgcgtttt tttaatggcg
     9901 agggcggtct gattgttagc ctccttcttt tgcctgaatg cataagccgc cagtaacaaa
     9961 gcagcaatag ctacaaacga aaacaggacc gcagcgatac gggcgcgttg taaacgctgt
    10021 ttttgtgatc tttccttttc ttttatttct gcttcaacct gcagcctgct tttttccagg
    10081 aaaagcatgg ccgtatcgaa aaggttgttt gaccgctttg cccatccttg gttgggcgca
    10141 ttatcccgct tccagttcag cgccaactcc aattcaggat tgcgccacaa acttccaagc
    10201 cccttttcat gcaactcagc ggcctggctt aacctgagat agatctgctt cgactgattt
    10261 tcttcatcta cccatgttat caatctttcc catattcgca tcaggctctc atgcgaaata
    10321 tcgataaccg agtcttcact cagtatcaca cttgccgatg gggttagaaa agctcttccc
    10381 tcccgcctga acacattgat cacttccatg acttcgcccg ttgtcgcttg cgctgacatt
    10441 gcgatgtcct ttagtaactg tggcctcctt attcccctgg cgtctgattc tttatcggtg
    10501 agcgccttaa acatcacttc gcagatatac ttctgccgct cgcttaattc agcaaaagct
    10561 tcttccgcat gctgagacaa cgcatgttcc atcgtgcctg tttgcaggta atcgttggta
    10621 tctatcgctg tttcagcgtc tgcttttttt ctccacacat cccatgtacg catcagggca
    10681 tgctgcagaa ccggcaattc atcctgcgtt aaatgaagat cattaacgag gcgtgcggtc
    10741 aaactcggat taattttcgc accatagagc ttgatcggat tttcaatgac acttttaagt
    10801 tgaacgcggt tcaggcgcgg aactaaatac tggctttgat tcatcgcctc cggcaatcca
    10861 aaaaatctgg cgcaatcacc aatgaaatcg gagcgcatcg ttattactat atagatcggc
    10921 aattctttac gctcggagag ctcgagcata atgttcacga aatcgttagc ttcgtcgatt
    10981 ttgtcaatgc cggcgatacc ctttgcgaac cggaagactt cttcgaactg atcgatgaga
    11041 aaaaacgtat tcgttctgcg ctcttcccat aaaggcttca gaagttcaat gatggcatca
    11101 gccccttctt ccttaatttt tctcatgaag gttgccaatt cactgtgtgt gtttgaggcg
    11161 ttcaattgat caagtatggc agcggcgaaa ttgttcaacg gactttggcc aggcttgaaa
    11221 ccggcgatca tccatcggtc gcgatcatca acaagatagc cagcctttaa tgccggtata
    11281 agaccggcgc gaatgagtga agacttacca cttccggaac tgcctacaac agccacgaag
    11341 tgattttcgt gcagccgttg aagtaattcc agcgtttgct gctgccgtcc aaaaaacaaa
    11401 aggctttcat cgctttcaaa tggccgcagt cccacaaacg gatttgaagt ttgggttaaa
    11461 ctcatacctt attcgccttt taaatttttc aggaacgtgt tcagcacgct ggtgtcaagg
    11521 ttggtattcg tgctgttatc gatcaccgat acctttagaa aacgttgttt gagagatatt
    11581 tcattgggat cctttcgtgg cggtgcgaga taaataaaaa aatcatcaat gggataatta
    11641 ttcgtaacga tcacctgtag tgcggcgctc atacgttcta atacccagtc cctcgaaact
    11701 ttgccataaa aaaatataag cttgctcacg tggcttatgc gttccgcaag caaattgata
    11761 ttcttcctcg ggtcatcttc ctgcggattg atgaatgcct ggatgtcatt ttccaataac
    11821 gctttcccta catccatcgc gtaaacctgg tcagtgaaat gtgtgtcgag caaaacagat
    11881 atcttgcctt tcgccttttt ccgctcatgt tcctgtttca atatcgcagc aatatccgcg
    11941 acctcctggc tgagcgtact ctttactccc cggatgtatt caaaacttcc ttctgatcga
    12001 tttccggttt caagctcctg cagaaaaatt ttatatttct catcctctac cgattcaaaa
    12061 tcaagttccg caggcaccca aactattttt gatttggcaa actgcaaagc caactctgcc
    12121 tgtttttgtg agtaccactg atcatccgaa ccggggatat ctctgcccgg atattggtcg
    12181 agcaagtgaa ccgcgagttc cgtttttttc aattcgtctt taaccctctg ttcatgtgct
    12241 tcagcgtcgt cgggaggggg aacgccatat atgatgttga accctttttt ctccaggtcg
    12301 gagatagtcc gcttacgcgc cgaacgcaat gtgtccgcaa cttcaccaaa gaagatcgtg
    12361 aaattttcac gcgtttgctg ttccgcgtga gcggtcagcg gtaaaacaga gtgaacgtta
    12421 tgaaagcgct cacacagtgc cagcaccgaa tctctgagct ccttcatttt tgtggtaaag
    12481 tgcggatgat taaagtcaat gggatcacca aattcgccag actgcactgc atcatggaaa
    12541 tggaagccgg tagtgccgcc aagctctgcc ggccattgtg tgtacgggat attattgaga
    12601 agtatattta aaattcgcga acggtcgccc acctttagtc ccgtagcctc ctgttgcgat
    12661 ttcttatgga aaagctgcag ctccgacatg caatattcgg acgcgaggta ccccggcgaa
    12721 acaatgctca gcatgatcgc cgattgcctg atcccttctt taattgactc gtcaaacagc
    12781 ctgctgccgt caagcttttt attgtcccac catattttaa tggtgtccat tcttcccatt
    12841 ctcttcgcca gtaacaggtt gaggttttta taaaactgct ctatccaccc gtcgcgttga
    12901 ccgaagatcg tctcattgtc cacatgggca tagctgatga aaatgtcgta tgtgtaacca
    12961 ggtatgtagg ccataagcga agtatttgaa tttgtaaaac cagcgcacag ttaattgcta
    13021 ttcatgtgat ttttgttcgc gacttcacta ttcccgagta aaattattgc tcattctata
    13081 tgtcattgtc actcacaaca ggcaatgatg gaaacctgag tacgaaagaa cctgctgtga
    13141 cgtaaggcca gtttgaatct tgggtgctct aatataaatc ttatttacag ttaaaccaac
    13201 aaatttgttt ccgttaaatg acggagagct aagccgttta ttacacgggt gatattggct
    13261 gaagacacat tgcattccct tttgctgcgg ccgacatttg taccatgttg ttcatgaatt
    13321 caattgttat caccggcggg ccacggtccc acctcccgaa aatcgaaaaa actgcaatta
    13381 tgaagacgac tttaatagcg gaaaatgtag aaccggcgca ggtcaggttc accgctgaaa
    13441 gaacacaaaa aaggatgacc cgaatttccc cttttcttct tcttgtgctc ttcctgctag
    13501 tttggtttcc ttattccatt attagttcag gcaatctctt ttcagcctgg ctcatcataa
    13561 ttcctttcct tatagcaaac gtttcacttg ccgactttgc catctggaat tattttggag
    13621 gtaaaaagaa acttcttatc tgggtaagcg aggcggtcat ttccgctttg attttgtact
    13681 ggctattttg aatcagtgta aacgataaac aaatactatg aatttttcat tttgcaaatc
    13741 acccgacgtg ctatccacca gggagcttct ggtcttgcgc ttaattagtg aaggctgttc
    13801 aaccagcgat atttcagccc tcctcaccct tcctgtgaat accgttgaat cgtacagaaa
    13861 aaccatccgc gataaactgg gcgcgcggca cgcagcagaa gcggtgcata aagcgaggtt
    13921 attgaatttg ctgtagtaat ttttcgatca aggtcctccg ttttcaacct ctccataata
    13981 gttccggcaa gcgatcaatg acggttacta aagactcacc attcgttggt gggttttttg
    14041 ttgttaatta gacaccatgt tgctgtaact ccctataaat cgaaatcgaa aactaatttt
    14101 gtgccctttc atggaatcgt tgatagaacc agatttcgtc gagccgggaa ggaggatttt
    14161 tacaaattcc atctccatca taaaaaatga acggtcggga tcgtatgaac attaaaatcg
    14221 tatcaacatt aaaaataaat tgagatgaaa accagtaaca cttatgcaat tttcattgcc
    14281 ttttttcttt ttaccgcttg tcaaaccaat tccagcaata tgaatacaag ctcagcagat
    14341 agcacgcaaa atgattcatc gtcgaagacc gagttaattc cgccggcaaa aaatttccag
    14401 gcgaccatcg acggaaaacg gacagatctg tacactctga aaaatggtaa catgcaggta
    14461 gccataacc
//
LOCUS       DASQJI010000202         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_172781,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000202 DASQJI010000000
VERSION     DASQJI010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172781"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1592)
                     /locus_tag="VEV83_05945"
     CDS             complement(<1..1592)
                     /locus_tag="VEV83_05945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44686.1"
                     /translation="MKILTLFLVACMSLTITICFSQAGTLDSTFGNGGKVITHFGSYL
                     DGGGSAMALQADGKIVVAGTSSDSNEGDFAVARYNSDGELDSSFGVDGKLMTDLNDSS
                     DHASSVNVLDDGKILVTGYILGSSRLYFAMVRYTSNGTIDSSFGVDGKVISDLAAGGH
                     NVLILPDGKILLDAGVGLEWPNSAFFMTRFNPNGTPDSSFGVNGFGDTIYFKDAFSNS
                     AIALQNDGKIIVGGSAGVTQGDGSYFEALRLNANGTIDKNFGSNGRVITFHIWDWAHS
                     FAVIVQPDGKIIQAGDRYLRDDLDFALVRYKPNGELDSTFGLDGIASTNFGNEDDLIQ
                     AIAIQSDGKIVAAGFSGHDSLGFTRTYDFALARYTQNGQPDSSFGRKGRTTTDFANGG
                     DYGDIANAVSVQADGKIVLAGSAGNDFALARYNNNDGVLASGTIALKAYSVGGNVKIE
                     WISLNELNISQYNVERSVDGKNFISIANIKAQNNGEPKTEYSYTDFYPANGENFYRIK
                     SISKDGVVKYTSVVKVNFVSASS"
     gene            complement(1660..>2005)
                     /locus_tag="VEV83_05950"
     CDS             complement(1660..>2005)
                     /locus_tag="VEV83_05950"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44687.1"
                     /translation="TDFYPANGENFYRIKSISKDGVVKYTSVVKVNFVSASSSIVLSP
                     NPVTDILQIQGLSPSMKTISVFDVKGKLLRQITTSNHSYSFNTKQLSAGIYFVRIDEG
                     NHATTTTKFIKE"
BASE COUNT          546 a          461 c          406 g          592 t
ORIGIN      
        1 gatgaggcgc ttacaaaatt tacttttaca acacttgtat attttaccac gccatctttt
       61 gaaatcgact tgatgcggta gaaattttct ccgtttgcag ggtagaaatc tgtgtagctg
      121 tattcagttt ttggttcacc gttattctgt gcctttatat ttgctatcga aataaaattt
      181 ttgccatcaa ctgaacgttc aacgttgtat tgagaaatat tcaattcatt taaggatatc
      241 cactcaattt tcacattgcc cccaactgaa tacgctttta gagcgatggt gcctgaggca
      301 agaactccat cgttgttatt atacctggcg agggcgaaat cattgcctgc agagccggcc
      361 agaacaattt ttccgtctgc ctgaacagat actgcgttag cgatgtctcc gtaatctccc
      421 ccatttgcaa aatcagtggt cgttcttccc tttctaccaa acgaactatc gggctgtcca
      481 ttttgtgtat atcgcgccag cgcaaaatca taagtcctgg taaatccaag cgaatcgtgc
      541 ccgctaaaac ctgccgcaac aatttttccg tcagactgta tcgcgatcgc ctgtatgaga
      601 tcgtcttcat tgccaaaatt agtagatgct attccgtcca gaccaaaggt gctgtcaagt
      661 tcaccatttg gtttgtagcg tactaatgca aagtctaaat catctctcag gtaacgatct
      721 ccggcctgaa taatttttcc atccggttgc acaatcactg caaaggagtg agcccaatcc
      781 catatgtgaa atgtaatgac gcggccgttt gagccaaagt tcttatcaat tgttccgttc
      841 gcattcagcc gtaacgcttc gaaataagaa ccgtctcctt gtgtaactcc ggcagagcct
      901 cctacgatga tttttccatc attctgcagg gctatggcac tgttggaaaa cgcgtcctta
      961 aaataaattg tatccccgaa gccattcacc ccaaaactgc tgtcaggggt tccatttgga
     1021 ttgaagcgtg tcataaaaaa agcgctgttt ggccattcaa gacccacacc cgcgtcaagc
     1081 aaaatttttc catcgggcaa tatcaaaacg ttgtggccgc cggccgccag atcagagata
     1141 actttaccgt ccacaccaaa gctgctatcg attgttccat ttgaagtgta tctaaccata
     1201 gcaaaataaa gacgtgaact gccgaggatg taaccggtca caagtatctt tccgtcatct
     1261 aaaacattaa cggaagaagc gtgatcgctg ctatcattca aatctgtcat tagtttgcca
     1321 tcgactccaa aagaactgtc gagttctcca tcggaattgt atcgggccac cgcaaaatca
     1381 ccctcgttgg aatcagaaga tgtacccgcc acaacgattt tcccgtctgc ctgtaaggcc
     1441 atggcagatc cgccgccatc taggtaactt ccgaaatgag tgatcacttt gccgccgttg
     1501 ccaaaagtag aatcgagggt cccggcttgc gagaaacaaa tagtgatggt taacgacatg
     1561 cacgcaacta aaaacagagt aagaattttc atagtgttta tttgtggttg ataaataatt
     1621 tacgatatcg gtatgacgcg acggcgtctg actgcgttct cattctttaa taaacttcgt
     1681 tgttgtggtt gcatgattgc cttcatcgat ccgcacaaaa taaattcctg ctgaaagttg
     1741 ttttgtattg aatgaataac tgtggtttga agttgttatt tgtcgcaaca attttccttt
     1801 tacatcaaat acggaaattg ttttcattga tggtgatagc ccctggatct gcaagatatc
     1861 tgtaaccggg tttggagaaa gaacgatcga cgatgaggcg cttacaaaat ttacttttac
     1921 aacacttgta tattttacca cgccatcttt tgaaatcgac ttgatgcggt agaaattttc
     1981 tccgtttgca gggtagaaat ctgtg
//
LOCUS       DASQJI010000203         7113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_787111,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000203 DASQJI010000000
VERSION     DASQJI010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7113
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787111"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2738
                     /locus_tag="VEV83_05955"
     CDS             <1..2738
                     /locus_tag="VEV83_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44688.1"
                     /translation="GTDGDGLHLMNRQNGTFERLTYDALHPEKLCRPPVKKGNHIDHI
                     TFIAEDVAGKIWIGTYSEGIVCYNAKTKKIDHFNSDDKKRAKGYTDNSTWQCYVSKDG
                     TVWISNEVNELFRVDPLQTGFSAVKMDANVALLFEDSSKNLWMTEENKGLVMVDAKTN
                     QKKYFLHDPADPFSISSNTSIFILPRRDGKWWVGTWNGGNLFDPQTGRFTRYFYDPHI
                     KDEDATGLVTVLETGNETYFGLTGGRMAVQNNNTGVITNYVNNPADPNSISTGPPGSL
                     TAVAAFLDKGDGNIWISVWSKEGAALDLFNKKTRKFKHYLEKLTVGGILKSSDGKMWV
                     GTSQGLFYRNDSLDSFIPVGPEGSEFRKTRVISMIEDGQKNIWGVTAIGIFRYNPPKN
                     ELNIYGDKFGVFGVGDLPFQPSFISSKGELFFGNRRGYYKCFPYEVINNIPSQIVLTD
                     FKIDGHRVRPGIEGLLKGTLEDAKEIPLNYKQNIFSIDFAAIHFSDPENNIHQYMLEG
                     YENAWRDAPGEKAAYYFNIPQGHYVFKVRAVTSYGVRSEKSIKITVLPPWWQTWWAYT
                     LYAVLFISAVWIFIKWRTRTLKKEKIILEQKVTERTKELKDEKEIVETTLNELRSTQS
                     QLVQSEKMASLGALTAGIAHEIQNPLNFVNNFSDVNKELLEELKDEIDKGNIEEVKAI
                     ANDVIDNEQKINHHGRRADAIVKGMLQHSKASTGEKELTDVNALANEYLQLSYHGMRA
                     KDKNFNATLHTDFDDTISKLNIVPQDFGRVLLNLYNNAFYAVSAKASATADAVGEKAK
                     IPETFENPRGFGQLEADSSQLDANSAPYVPTVTIVTKKLSDKIEIKVTDNGPGIPRNI
                     IDKIFQPFFTTKPTGQGTGLGLSLSYDIIKAHGGEIKVETEEEEGSRFIIQLPVA"
     gene            2764..2910
                     /locus_tag="VEV83_05960"
     CDS             2764..2910
                     /locus_tag="VEV83_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44689.1"
                     /translation="MILQQGFTRQGNARSFSLRSDIIEENVGEKVETKEGKRSEFTII
                     LPGQ"
     gene            2916..4049
                     /locus_tag="VEV83_05965"
     CDS             2916..4049
                     /locus_tag="VEV83_05965"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HYK44690.1"
                     /translation="MKAKSIKGISLQEIQSALTASKADDFKPTLAIAFVSIKQDRAAI
                     TRIFTDAGIAVFGATTNGGFIDDTVEREASAIMLLDINTDYFTVLLQEYPDKNYREVA
                     AGLAKKGLERFPRPAFFIAGSHTETDAEQLLFGFEDVIGKHVNIYGCMAGDDFLFTEQ
                     FVFTNHGETSRGMVMVAFDEDKIDMKGRATCGWKAVGTVRTVTKSEGNHVYTVDDMPV
                     LDLTAKYGGLQIKKKTDFSIEVATQFPLQLQRERGDPVMRPGLLIDWSDHSFYCSGTV
                     PQGSKIRFSLPPDFDVIDKVISACEDLKATEIPDADAVIIFSCAGRFVALGPLIGEEI
                     EGMSKVWNAPIAGMFSNAELARATGGNLEMHNLTACVVALKEK"
     gene            4124..>7113
                     /locus_tag="VEV83_05970"
     CDS             4124..>7113
                     /locus_tag="VEV83_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44691.1"
                     /translation="MKSYLQNIYSLILQNEQLNDEAKQALLKSLVEADKQWTITDFKL
                     DRTEKVKHTTAVLLEETIEELEQKRKAVEAQNRELEIESSLERVRTVAMSINKADDML
                     DVCRTISHQLELLAVKEIRNVQTAIFYQAKGTYMNYEYYAKHDKTFITETTYTNNKIH
                     EAFAQKMLKGNGEFFITHINGDEVKDWVAYQKTTNVFIDDYLYTASSLNYYWFSLGPV
                     ALGISTYSPLGEEDIDLFKRFRNVFEFSYRRYLDIEKAEAQAREAQVQLSLERVRART
                     MAMHNSAELAEAVYILFQQFRELGENPDQATVGIINEDEGVIEYWVTMYGNQMNRVFK
                     FSLDEPHVTRKIYQAWKAGEKSVVIDLSGTELREFMEYRAGMGGAAVNEDETRRIINV
                     AFFSKGLLNVQSNETRSVASIKLLERFAAVFEQTYTRFLDLQNAEAQARESQIQLALE
                     RVRARTMAMQKSDELAETASVLFKQIMDLGNKTDRFSIYIVNEEEGIGNGWVTDQLGT
                     SLKRQFKADLNEKTSFRKIYDAWKKGYKSLSILLEGDELKEWLRYVRDRMGLPVNDAH
                     FNNKRHHNIAFFSRGWFMFSSFEPLDKEAILISERFAKVFEQSYTRFMDLKNAEAQAR
                     ESQIEAAMEKVRARAMAMQKPNELIEVAQLLRKEMGLLGVEELETSSIYIHNEVSGLT
                     ECWFAIKDIREGERKLVADHMTMQLNDTWVGRKMLKFYTSDQKQTSILMQGQNRKEWI
                     TYCSEHSKLLSGYYGNEIPDRTYHLLKFSNGYMGAASPGDISAESWDLLRRATAVFSL
                     AYTRFSDLQLAEARAREAMIEAALERVRAQAMAMHKTEDLSSAVATVFEEMDKLDLGM
                     TRCGIGILNKERKSAEVWTAHQSQSGSTIEVSGNESMDIHPLLQRAFDAWLKQQEDFF
                     YVLQGEDMIRYYEAVRGPNFRLPESELILSLDKVQKQYYYAAIFKAGGLFALQETELS
                     EEAKKLIKRFANVFDLTYTRFLDL"
BASE COUNT         2299 a         1335 c         1697 g         1782 t
ORIGIN      
        1 tagggacgga tggtgatggc ctgcatttaa tgaacaggca aaatggaacc tttgagagac
       61 ttacttatga tgcattgcat cctgaaaaat tatgtcgtcc gccagttaaa aaagggaatc
      121 atattgatca tataactttt atcgcagaag atgtagcggg aaaaatatgg ataggcactt
      181 attcggaagg aattgtttgt tataatgcca aaacaaaaaa gatcgatcat tttaatagtg
      241 atgataaaaa aagagccaaa ggatacactg ataacagcac ctggcaatgt tatgtttcaa
      301 aagatggcac agtttggata agcaatgagg ttaacgagct tttcagggtt gaccctttac
      361 aaaccggttt ctcggctgta aagatggatg caaatgttgc tcttttgttt gaagattctt
      421 ccaaaaactt atggatgact gaggaaaaca agggattggt aatggtagac gccaaaacaa
      481 atcaaaaaaa atatttttta catgatccag ccgatccttt ttcgataagt tccaatacca
      541 gcatttttat attgcccaga cgggatggga aatggtgggt aggaacgtgg aatggcggaa
      601 acctttttga cccccaaacg ggtaggttta caagatattt ttacgatcct catattaaag
      661 acgaggatgc gactggactg gttactgtac ttgaaacagg taacgaaact tatttcggat
      721 taaccggtgg caggatggct gttcaaaaca ataatacggg tgtgattact aattacgtaa
      781 acaatcctgc agacccaaac agcatttcaa cggggccgcc aggatccctg acagcagttg
      841 ctgctttttt agacaaaggt gacggaaata tatggataag cgtctggagt aaagaaggcg
      901 cagcacttga tctattcaac aaaaaaacaa gaaaatttaa acactacctg gaaaagctaa
      961 ccgtgggagg tattttaaag agcagtgacg gaaaaatgtg ggtcggtaca agccagggcc
     1021 ttttttatcg caatgattca ttggattctt ttatcccggt aggccccgaa ggatcagaat
     1081 tcaggaaaac aagagtgata tctatgattg aagatggaca gaagaacatt tggggtgtta
     1141 ctgccatagg gattttcaga tataatcctc caaaaaatga actcaatatt tatggtgaca
     1201 agtttggcgt tttcggcgtc ggtgatttac catttcaacc atcctttata agttcaaagg
     1261 gtgagctgtt ttttggtaac cggcgtggtt attacaaatg ttttccctat gaagtgatca
     1321 ataatatacc atcgcaaata gtgcttaccg atttcaaaat tgatggtcac cgggtaaggc
     1381 caggtataga gggattatta aaaggcacac ttgaagatgc aaaagagata ccgcttaatt
     1441 ataagcaaaa tatcttttct attgactttg cggctataca ttttagcgat ccggaaaata
     1501 atattcatca gtacatgctg gagggatatg aaaatgcatg gagggatgcg ccaggtgaaa
     1561 aagcagctta ttattttaat ataccgcagg gacattatgt tttcaaagta agagcagtca
     1621 caagctacgg agtacggtct gagaaatcaa tcaaaataac ggtattaccg ccctggtggc
     1681 aaacatggtg ggcttataca ttgtacgctg tcttgtttat aagtgctgtt tggatattta
     1741 ttaaatggcg aaccaggaca ttaaaaaaag aaaaaataat actggaacaa aaagttaccg
     1801 aacgcacaaa ggaattaaaa gatgaaaaag aaattgttga aaccactttg aatgaattga
     1861 ggtcaacaca gtcacaactt gtgcaatcgg agaaaatggc ttcgcttggt gcgctcacag
     1921 cgggcattgc gcatgaaatt cagaacccat tgaatttcgt gaataatttt tccgatgtta
     1981 ataaagaact gcttgaggaa ctgaaagatg aaattgacaa agggaacatt gaagaggtaa
     2041 aagcaattgc aaacgatgtg atcgataacg aacaaaaaat aaaccatcac ggcaggcgcg
     2101 ccgatgctat tgtaaaaggc atgttgcaac attcaaaagc aagcacaggg gaaaaagaac
     2161 taacggacgt gaatgctttg gcaaacgaat atttacaatt gagttatcat ggtatgcgag
     2221 ccaaggacaa gaatttcaac gcaacccttc acacggattt cgatgatacg attagtaaat
     2281 taaatatcgt tccccaggat tttggaagag tgctgttgaa tttgtacaac aatgcgtttt
     2341 acgccgtgtc cgccaaagcc tcggcgacgg ctgacgcagt gggcgaaaaa gcaaaaatcc
     2401 ccgagacttt tgaaaacccc cggggtttcg ggcagctcga agctgacagc tcacagctcg
     2461 acgctaatag cgcgccctac gtcccaacag tcactattgt cacaaaaaag ttgagtgata
     2521 agattgaaat aaaagttacc gacaatggcc ccggtattcc tcgaaatata attgataaga
     2581 tttttcaacc gttctttact accaaaccaa caggccaggg aacagggttg ggtttaagtt
     2641 tgagctatga tatcatcaaa gcgcatggtg gtgagataaa agtcgaaact gaggaggagg
     2701 aaggtagtag gtttattatc cagttacctg ttgcttaatt atagtgtcgc agcaactaac
     2761 tcaatgatct tgcaacaagg attcacccgc cagggaaacg cacgaagttt tagtttacgt
     2821 tctgacatca ttgaggaaaa tgttggtgaa aaagtggaga caaaggaagg caaacgaagt
     2881 gaatttacaa ttattttacc gggacaataa cgttcatgaa agcaaaatca ataaagggaa
     2941 tatcgctaca ggaaattcaa tccgcattga cggcaagtaa ggccgatgat ttcaagccca
     3001 cgctggctat cgcttttgtt tctatcaaac aggaccgtgc cgcgatcacc cggatattca
     3061 cggacgccgg cattgctgtt ttcggtgcca ccaccaacgg aggctttatt gatgacacag
     3121 tggaaaggga agcgtccgca atcatgctcc tcgacataaa cacggactat tttactgtac
     3181 ttcttcaaga gtatcctgac aagaactacc gcgaggttgc tgccgggctt gctaaaaaag
     3241 gtttggagcg gtttccccgc cctgcctttt ttatagcggg cagtcacacg gaaacagatg
     3301 cggagcaatt gctatttgga tttgaagacg tgatcggaaa acatgtgaat atttatggtt
     3361 gcatggcggg tgatgacttt ttgttcacgg aacaatttgt atttacgaat cacggcgaaa
     3421 ccagcagagg aatggtaatg gttgcttttg atgaagacaa gatcgatatg aaaggcagag
     3481 caacctgtgg atggaaagct gtgggcacgg tgagaactgt taccaaaagc gaggggaatc
     3541 acgtgtatac agttgatgac atgccggtgc ttgacctgac ggcgaaatat ggtggcctcc
     3601 agataaaaaa aaagactgat ttttcaatag aagtggctac acaatttcca ttgcaattgc
     3661 aaagagaaag gggagatcct gtgatgcggc cgggtttatt gatagactgg agtgaccatt
     3721 ctttttattg cagcggtaca gtgccgcagg ggtctaagat ccggttttct ttgccacccg
     3781 attttgacgt gatcgacaaa gttatcagtg cctgcgaaga tctgaaagca acggaaatac
     3841 cagatgcgga tgcagtgatc atatttagtt gtgcgggcag gtttgtagca ttgggcccgc
     3901 tgatcgggga agagatcgaa ggaatgagca aagtatggaa cgcaccaatt gcagggatgt
     3961 tcagcaatgc cgaactcgcc agggcaacag gcggcaacct tgaaatgcat aacctcaccg
     4021 cttgcgtagt ggcattaaaa gaaaaatagt ttgcgttcag gaagaacatt actgactttg
     4081 cataaggaat ccgcggcgtc aaaaaccatt ttcagaaatc cgcatgaaat cttatctaca
     4141 aaatatctat agcctcattc tacagaatga gcaactgaat gacgaagcaa aacaggcgct
     4201 cctgaaaagc ctggttgaag ctgataagca atggaccatc actgatttta aactcgaccg
     4261 caccgaaaaa gtaaaacaca ccactgccgt actactggaa gaaaccatcg aagaactgga
     4321 acaaaaaaga aaagcagtag aagcacaaaa ccgtgaactg gaaattgaat cttcactcga
     4381 aagagtaaga acggttgcca tgagcataaa taaggcggat gatatgcttg acgtgtgcag
     4441 aactatttca caccaactgg agctgcttgc tgtaaaagaa attcgtaatg tacaaactgc
     4501 catcttttat caagcgaagg gcacatacat gaattacgaa tattatgcta agcatgacaa
     4561 aacatttatt actgaaacaa cgtacacaaa taataaaatt catgaagcct ttgcgcagaa
     4621 gatgctaaaa ggaaatggag aattttttat cacgcacatc aatggcgatg aagtaaaaga
     4681 ctgggtcgct taccaaaaaa cgacaaatgt ttttattgat gattacttat acacagcatc
     4741 atcgctcaat tattattggt tttcactcgg ccctgttgcg ttggggatat ctacctactc
     4801 accattaggc gaagaggata tcgatttatt caaacgtttt cgcaatgtgt ttgagttttc
     4861 ctaccggaga tacctggaca ttgaaaaagc agaagcgcaa gcaagagaag cgcaggtgca
     4921 actttcgctg gaaagagtgc gcgcgagaac gatggcgatg cataacagcg ctgaattggc
     4981 ggaggccgtt tatattcttt ttcaacagtt cagagagtta ggcgagaatc ccgaccaggc
     5041 aacggtgggt atcattaatg aagacgaagg tgtgatcgaa tattgggtta caatgtatgg
     5101 gaaccagatg aaccgtgtgt tcaaattttc actagacgag ccgcatgtta cccgcaaaat
     5161 atatcaagca tggaaggccg gcgaaaagtc tgtcgtcatc gacctcagtg gtacagaact
     5221 tcgggaattt atggaatacc gggccggcat gggaggcgcc gcagttaatg aagacgaaac
     5281 acggcgaatt ataaacgttg cctttttctc caaagggcta ctgaatgttc agtccaatga
     5341 aacgaggtca gtcgcaagca taaagttgct ggaaagattt gcggctgtct ttgaacaaac
     5401 ttatacccgc ttcctggatc tgcaaaacgc agaagcgcag gcaagggagt cgcaaattca
     5461 actcgcatta gaacgagttc gggcaagaac aatggccatg caaaaatctg atgagcttgc
     5521 agaaacagcc tccgttcttt tcaagcaaat aatggatctc ggaaacaaaa ccgatcgttt
     5581 cagtatttac attgttaatg aagaagaggg cattggtaat ggatgggtaa cagaccaatt
     5641 aggtacgagt ttgaaaagac aatttaaagc agatctcaac gaaaaaacat cttttcgaaa
     5701 aatatatgac gcatggaaaa aaggctataa atcattgtca attctactgg aaggtgatga
     5761 gttgaaagaa tggttaagat atgttcgtga caggatggga ctacctgtaa atgatgcgca
     5821 ttttaacaat aagagacatc acaacattgc ttttttttcg cgtggttggt ttatgttttc
     5881 ctcttttgag ccgcttgata aggaagccat tcttatttcg gagcgatttg caaaagtctt
     5941 tgagcaatct tacacacgtt tcatggatct taaaaatgcc gaagcccagg cacgtgaatc
     6001 gcaaattgaa gcagcgatgg aaaaagtgag agcgcgggcg atggcgatgc aaaaaccaaa
     6061 tgagcttatt gaagtagcac aattacttcg taaagaaatg ggtttgctcg gcgtcgaaga
     6121 actggaaaca agttctatat acatccacaa tgaagtgtca ggattgactg agtgctggtt
     6181 cgccatcaaa gatatccgcg aaggcgaaag gaaactggta gctgaccata tgaccatgca
     6241 gctaaatgat acatgggtgg gaagaaagat gctgaagttt tatacctccg atcaaaaaca
     6301 aacttcgatt ttgatgcagg gtcagaacag gaaagaatgg atcacctatt gttctgaaca
     6361 ttcaaaactg ctcagcggat actatggaaa cgagatcccc gacaggacgt atcatttact
     6421 aaagttttcc aatggctaca tgggtgctgc atcgcccggt gacatctctg ctgaaagctg
     6481 ggatctgctg cgacgagcaa cggctgtttt ttctttagcg tacacgcgct tcagtgatct
     6541 ccagttggct gaggcccgcg caagggaggc aatgattgaa gcagctttgg aaagagtgcg
     6601 tgcacaagca atggcaatgc acaaaaccga agatctgagt tcagcagttg caacggtgtt
     6661 tgaagaaatg gacaaactcg atctgggcat gacgcgatgc ggcattggaa ttcttaataa
     6721 agaaagaaag agtgcagaag tctggaccgc acatcagtca caaagcggaa gtacaatcga
     6781 agtctcagga aatgaatcaa tggatattca cccgctgtta caacgtgctt tcgatgcatg
     6841 gttgaagcag caggaagatt tcttttatgt tttgcagggt gaagacatga tccggtatta
     6901 cgaggcagta cggggaccaa atttcagact gccggaatca gagcttattt tatcactgga
     6961 taaagtacaa aaacaatatt actacgctgc gatatttaag gccggtggac tgtttgcttt
     7021 gcaggaaaca gaactgtctg aagaggcgaa gaagttgata aagcgtttcg ccaatgtgtt
     7081 cgatcttact tacacgcgtt tccttgatct cca
//
LOCUS       DASQJI010000204        23022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_326361,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000204 DASQJI010000000
VERSION     DASQJI010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 23022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23022
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326361"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..2186)
                     /locus_tag="VEV83_05975"
     CDS             complement(255..2186)
                     /locus_tag="VEV83_05975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK44692.1"
                     /translation="MKIKRILIATFCGLLFILHAKGQTLFTYGTHAVDKNEFLKAYNK
                     NPDTTGDRAEKMRQYLDLYINFRLKLQAAYDEGVDSNEQIKTEADNFKDQLTENFIND
                     QSDLRELVHEAFLRNKKDILVQQVFVAAGTDTAAAYAQISKAYNELKAGKNFDSVTKK
                     YSSDSAVRASGGTIGYVTVFTLPYSIENIIYSLKPGGFSTIYKSKAGYHIFRDAAERP
                     ALGRRKVQQLLFPVLPFFNDEQKAASKAEADSVYNVLQKGGAFTPLLAEYGHSSEGQE
                     GNTVEIKVGQYNGNFEKEVFGLAKPGDLTRPFKTEYGYNIVKLVEIIPPITDESDVES
                     AAYLQEQIKKDGRLDVAKQKMIPRWLALTHFKAQPYNQADLWAYSDSALKMDEDTMPA
                     LYKGIKPSTTLFEFEKKKTPVSEWIAYLRFMQGTTQATPQGRYEKMMRDFTNGSCEGY
                     YKEHIEDFAPSIKEQLKEFNDANMLFFVMDKHVWSKAPEDTAGLNQYYKEHADQYKWN
                     KSLSAVVISGPDKSVITEIAARVKEHPADWRNIITPYGSTIYADSSRFEADQLPVKQS
                     LKFEKDFQTDPEANDAGDAFTFVHVMQIFPQPEPRSFEEARGLVINDYQQQLEQQWVD
                     GLKKKYPVKVNDAVLKTIR"
     gene            complement(2193..3650)
                     /locus_tag="VEV83_05980"
     CDS             complement(2193..3650)
                     /locus_tag="VEV83_05980"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-like domain-containing protein"
                     /protein_id="HYK44693.1"
                     /translation="MRRFTAAVIILSSIIFTDPAQAQTPPQGYEITASTDFKNSMLYL
                     GSYYGKKKILVDSALADKKGIAQFRGTKRLPMGIYFLVSPQKVILFELLMDYGQHFSL
                     VSDSTKPGDVKFTGSPDNTLFADYTVFLTQISPSLNLLQEQLKTAKNPQDSAAATQEY
                     IKASNKLTEYRNNVINNQPNSMLAALLQIAKIPDRPQPRVLANGKIDSLYPFYFVKEH
                     YWDNVNFNDDMLLYTPFFEPKLDDYFKYYVAPDPDSIINEVNYILLSSRETKDLHNYL
                     LAKFTDKYINPEYMGQDKVFLFLFQNYYAKGDTTWLNEKQRKYIFDRAYSLMANQINE
                     PAAPLDLTDTAGRSVSLYEIKAPLTFVAFWDPHCSHCQLQIPRLDSFFEAKWKTEGVK
                     IVAVCVNDYVLDDWKKFIGEHKLNGWIHAYETKERRTQLEAANLPDYRQLYDISQTPT
                     FFLLDEKKRIIAKGLSLDQYDGLIDTKLKSVSSSQ"
     gene            4117..5550
                     /gene="rlmD"
                     /locus_tag="VEV83_05985"
     CDS             4117..5550
                     /gene="rlmD"
                     /locus_tag="VEV83_05985"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HYK44694.1"
                     /translation="MRRNKAPVILEELRIENYAAEGKSLAKLNGKVVFIENTVPGDIV
                     DVQVFKNKKDWAEGFPLRFRKFSEERVDPFCEHFGVCGGCQWQMLPYEKQLHYKEKQV
                     GDMMARIGKIQAPTILPIIGAEESRYYRNKLEYAFSCKQFIPENEFRKLIADGANVKA
                     VAIKSVAGFYAKGVFDKVVEIKKCWLQSEPTNLLRNAIAEFSREQNFHFYDFREHNGW
                     LRNMQVRMATTGEMMVNVIITDEDRKRMQPLFNFIQGHFPQITTLLYTINAKRNDSIF
                     DLNPQIVFGKGYIIEKLENFQFKIGPKSFFQTNTRQAEKLYSITREFAALTGHQTVYD
                     LYCGTGSIGIFVSGSAKKIVGVELIAEAIADAKENAALNNISNAVFYKGDVIDTCTET
                     FFEENGNPDVIIVDPPRAGLHGKLVEKLLQVRAPVIVYVSCNPATQARDISILKDAYS
                     VEKIQPVDMFPHTHHIENVMQLKLKTE"
     gene            5560..6396
                     /locus_tag="VEV83_05990"
     CDS             5560..6396
                     /locus_tag="VEV83_05990"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYK44695.1"
                     /translation="MREFRPGSFQILPPVIKNLIIINVLVFLIQQTVLHVNHTTMMED
                     VFALHTWQSSRFRIWQFFTYMFLHDTSSILHLALNMFALWMFGSVLENLWGPKRFLIF
                     YVVCGLGAALCHMAVLYVNAEHLLRDYYVLQQHFTLENFTNYYRKENIGAFYEGAGDV
                     LNQWQSNPGNPIFAQHAWGMVNQFVNDNLNGSTIGASGAVFGCLAAFGYLFPNTYLYV
                     YFAIPVKAKWVVLIYIAIELFATVNTSAGDNVAHVAHLGGALFGFLLVYFWNKTNRRT
                     FY"
     gene            6426..7337
                     /locus_tag="VEV83_05995"
     CDS             6426..7337
                     /locus_tag="VEV83_05995"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYK44696.1"
                     /translation="MSVREQNRRNPILLGQDNNALTWLIIINAVMFVTLLFTKVIFQM
                     SNGGDLQTFQTQILNWFALPGATDKILSRPWTVISYMFSHDSIWYFISSLLWLWCFGY
                     ILQDLAGNTKLFPIYLYGGILGAIGFVLAANLLPGLQTNIQSLSVMGAATSVVAVAIA
                     TTTLSPNYRIFPMLNGGIPLWVVTLVFIAVDFSTIGITNSAVAIAHLASGLTGFLFIS
                     QVKKGRDPGAWMFAVSNWVNDLFNPEQKRRDEQFHYKATRKPFEKTPHVTQQKLDEIL
                     DKINSQGYHFLTEEEKEFLKKASQEDF"
     gene            7359..8450
                     /locus_tag="VEV83_06000"
     CDS             7359..8450
                     /locus_tag="VEV83_06000"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HYK44697.1"
                     /translation="MRYFLKTAWTASCFFVVALFLVSCCTAYISPERFSYITLFAIAF
                     PYLFALVLLLAFISFFVKRPLAIMLLLALIAGYTNLSRTIAFHRQQEWQTTKHDSALR
                     TFTWNVQYFGSIEDGTYMDTEMIALIADYKPDVVCMQEFSNTENGSRRASIREEMNGL
                     GYKFYFFSNDRVIRPKNATVTDGVAMFSKLPFTDSARININKEQNENLIYASVMFNNK
                     PVRIYTGHLASFDLYKDTASSQKDIYQITYDRKRAVQYKLRETEQLHQQEVSIIRNSI
                     SKSPYPVIYVGDMNTTPCSYNYRLLRNNFQDAFLEKGSGFGATFYKILPTLRIDVCFA
                     DASFRINQCTVVKRQLSDHYPLVTDISWK"
     gene            8478..9599
                     /locus_tag="VEV83_06005"
     CDS             8478..9599
                     /locus_tag="VEV83_06005"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HYK44698.1"
                     /translation="MAGGVLRRTVKKFLLILTIVVCTIYSLTLLIPYLNPQRWWLIGF
                     LGLTFPYLFFLLVFVFFFWLMAKPKLAWVPVLALLLGAKQIAVTFAVHITSNDINKKP
                     ESSIRLVSWNVANMYGLSTNKEVKQHNRRELAQTILDLKPDIICLQEFNHSYTQGEQA
                     DNIGLFSKQYPHFYYSIDFNKQNGYYTSGSVVFSKYPIIDSGRRDYPGTFTGSLLYVD
                     IKIPADTIRIYTTHLQSFGFNTEDYADMNKIKEQNDQAIEASKNIFNKMKGAFTNRGM
                     QADLVRETTDVSPHASIVCGDFNDVPTSYTYFHIRNQRQDAFLQRSLGVGSTYNSIAP
                     MLRIDYILPDTSFSIQQFDMVDENLSDHQMLVSDLKLKR"
     gene            9749..11254
                     /gene="cysS"
                     /locus_tag="VEV83_06010"
     CDS             9749..11254
                     /gene="cysS"
                     /locus_tag="VEV83_06010"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HYK44699.1"
                     /translation="MGDLKVYNSLTRQKEVFKPITAGHTGMYVCGPTVSGESHLGHAR
                     PYVTFDIVYRWLTHLGYKVRYVRNITDAGHFEEEGRAAEDKISKKAVLEKLEPMELVT
                     KYTNLYHWAMRKMNNLDPTIEPTATGHIVEQIGMIEKIIADGYAYVINGSVYFDVEKY
                     NTEFEKRGEPYGILSGRVLDEMIETTRDLDNQEEKRNKADFALWKNAPPEHIMRWKSP
                     WGYGFPGWHIECSAMSTKYLGEVFDIHGGGMDLQFPHHECEIAQSNVCNHKIPAHYWI
                     HNNMITINGKKMGKSYNNVITLTELFSGSNALLEQAYSPMIIRFFILQTHYRSTLDFS
                     NEALQASEKGLKRLWEAYENLSKIQTATGSAQDSALDAKVNKLMNEFEEFLNDDFNTA
                     KVLANMFELVPVINGIKDKHLPANALSAPTIELLKQKMKLYVEDILGLKMETAADNSK
                     LDGVVQLLIRIRKESRAKKDYVTSDKIRNELQTLGIQLKDEKDGNISYTIN"
     gene            11380..12891
                     /locus_tag="VEV83_06015"
     CDS             11380..12891
                     /locus_tag="VEV83_06015"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HYK44700.1"
                     /translation="MNRVNMLQQVAESKTWDVLIIGGGATGLGAALDSASRGYSTLLL
                     EASDFAKGTSSRSTKLVHGGVRYLEQGNIKLVREALRERGWLLQNAPGITQKRGFIIP
                     AFSWVQKIYYGTGLKVYDTLSGKLALGGTKFLSKKETIKFLPGLIDKKLTGGIVYFDG
                     QFDDARLAIALAKTAVQHGAVLLNHFKVISLLKANGNVGAVAGVDTLSRKIFEIRAKT
                     VINATGVFTDDILKMDDGKAEEIVTPSQGIHLVVDKKNFPGDHALMIPETDDKRVLFA
                     VPWHNKLLIGTTDTPVEHTSLEPRPLEEEIQFVIKHANRYLRAGIQEGDITSMFAGLR
                     PLVKMKGVKKTSLLSRDHTIIVSTSGLVSITGGKWTTYRKMAEDAVNNAIFVGKFRHV
                     DCKTQHLPIEGSKFDRLDYSNEATLEKIYSTENIRSFIQDEMAMTVEDVLARRTRLLF
                     LDAKKAIEFAPLVALEMATVFQHDQQWIQKEIDNFISLAQNYVPHLKLKGLNH"
     gene            12912..13619
                     /locus_tag="VEV83_06020"
     CDS             12912..13619
                     /locus_tag="VEV83_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HYK44701.1"
                     /translation="MTAFTGEIVGTALLIILGDGVVANVLLNKTNGFNSGWIVITMGW
                     SMAVFTGVFVSAASSGAHLNPAVTIALAYAGKFDWSLVPIYIAAQMIGAMIGAFVVWV
                     AYKQHFDATENVSHKLAVFCTGPAIRNPVHNFITEAIGTFVLIFGVLSIISPANSLGA
                     LDALPVALLVLGIGLSLGGPTGYAINPARDLGPRIMHAILPIKNKGTSDWSHSWIPVL
                     GPIVGGLIAAVLFQVLH"
     gene            13843..14433
                     /locus_tag="VEV83_06025"
     CDS             13843..14433
                     /locus_tag="VEV83_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HYK44702.1"
                     /translation="MTPRQKILKFLYPLFVLINKTNKRHNKILYNEKNVAPANSIYEL
                     SVQLNNGGIESLSKYRNKKILFVNTASDCGYTNQYEALESLYEKNADKLVIIGFPAND
                     FKEQEKGSDEEIAQFCKIHYGVTFPLAKKSTVRKSDQQNEVFSWLSDKNKNGWLDKAP
                     QWNFSKYLVNEHGLLTHYFEPAIEPLAKELAEAIQS"
     gene            14439..15218
                     /locus_tag="VEV83_06030"
     CDS             14439..15218
                     /locus_tag="VEV83_06030"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK44703.1"
                     /translation="MAIALITGASSGIGFELAREFAKHRHDLVLVARSEDKLTSLADD
                     LKAAHHINVHVLAKDLSNAKQVDEVYAYTQLHNLQVDFLVNNAGFGDYAYFYDADWSK
                     LESMLDVNIKALTRLSWLYVREMVKRRSGRLMNVASTAAFQPGPTMAVYYATKSYVLF
                     LSEAMANELQGKGVTVTALCPGATESGFQEAADLHESRLVKGKKLPTSAEVAAFGYKA
                     MMRGKKVAIHGVGNYLLAQTPRFFPRNMVTKVVRLMQEKAE"
     gene            complement(15237..15710)
                     /locus_tag="VEV83_06035"
     CDS             complement(15237..15710)
                     /locus_tag="VEV83_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like YkuK family protein"
                     /protein_id="HYK44704.1"
                     /translation="MRWRRFNGETIHIPIKDAVEEAIKREHDKGVHLKVCIGTDSQVK
                     SDETEFATVIVFLREHNGGFMFIHNEKTRQRYNIKERMLVEVAKSIEVAYELCNLFIQ
                     YDVDMEVHADINTNPHFKSNDALREAMGYIMGMGFAFKAKPEAFASSCCADKACN"
     gene            complement(16049..16825)
                     /locus_tag="VEV83_06040"
     CDS             complement(16049..16825)
                     /locus_tag="VEV83_06040"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK44705.1"
                     /translation="MSIYESEDSVQRSFDTESMPEELLQAQWAEFIELKKIITALYDR
                     QKRNISMLDIGVGSGRVPKHLAGIPEIWNMIDRYDGIDNAMACINLSKKLAADLKIDD
                     KFFVHFLEADDLTALNRKYDVILTTWFTPGNFYPGDFSFDTYDPSKQRLDLTTNEKFI
                     AIFSAAYNLLHEGGEIVLGACYIDNDATRLRQENFYRQLGMSVITDAKDSFTATKEKF
                     WSQRFSKERIYKYFSYVPREKISFMPLDTYNYAMQVRIKK"
     gene            complement(16961..19798)
                     /locus_tag="VEV83_06045"
     CDS             complement(16961..19798)
                     /locus_tag="VEV83_06045"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK44706.1"
                     /translation="MTSLELRFLTALLLITQTLIAQNRTITGKIIDASTHTPLSNVSV
                     KIKNSGMGAVTKADGGFSVTAQPGDVIEISYVGYTMQTVTVGDQSFYSVELQPAFTEL
                     GEVVLVGSRSGGRIKTETTVPIDVVNVSRSRLPSARMGITDVLNYAAPSFNYNKQSGS
                     DGADHIDLATLRGLGPDQTLVLVNGKRRHQTAFVAVFGTRGRGNSGTDLNAIPVSSID
                     RVEILRDGASAQYGSDAIAGVINIILKKDVGHFTGNVGWSGYYDKKYNPHFFDDDNEY
                     YKHAAIDGNAFDFNADYGFSVGKNGGFFNLAGSVVLNGKTFRQDNGTLPINSVRRANG
                     DGSMTDAGAMFNMEIPLNANSKTSFYAFGGYNYNLSNAYAFTRNFSARPDRFPTGNYD
                     PSTNSAPLIFNPEIMKTNADEETYYNPIIQTHISDASLAAGIKGTTAGGWNWDLSNAI
                     GNNDFHFYGDKTFNASLGPDQTHFDDGGFTFLQNTTDLNFSKKISGVGAGFNLAFGAE
                     FRYEDYKIKAGEEGSYKTYGSSFVSIDSVFDDDQVFVGLDTTFKAGGSQGFPGYQPGD
                     VVDANRTDIGAYIDAEFDVTKAFLIAAAIRAEDYSDFGFTSNYKLAMRYKVAPKFNLR
                     GSVSTGFRAPSLQQINYSSTFTTVQGGVISEVKIAPNYSDLAKAAGIPNLTQEKSVTA
                     SLGFAFTPTKELTITVDGYYVKIKDRVVLSGQFDATDPTLDEDLTNALQNANVAYAQF
                     FANAVNTTNKGVDIVIDYNHQWSTQHFRALFTGNFQNMTIDQINVPEKLNDTKQHQET
                     FLSDREQKFILASAPPGKFSLNLDYTVDKFGIGTRFTYFGRVILLGYGEDGSGIDPMV
                     PTDADENVYVPDQYNYGAKVVTDLYLSYRLAKAATLYVGADNLLNVHPDLGYAHGASY
                     WAFNNETGGPFDAVQMGQNGMHLFARLGINF"
     gene            complement(19917..21308)
                     /locus_tag="VEV83_06050"
     CDS             complement(19917..21308)
                     /locus_tag="VEV83_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HYK44707.1"
                     /translation="MVQTKLNTGLGGRLLAMRDQFRSGATRTYAFRKEQLLNLKRFLL
                     KYEEEINEALFLDLKKSKEETWATETGLLMSEINTALKHLHQWMKPKRVRTNLLNLPS
                     SSFILYEPLGVVMIIGPWNYPLQLLLIPLVGAIAAGNCAVLKGSEFSPATSAVIRKII
                     EKAFPEQYVLYVEGEGHVIVPELMSNFVFDHIFYTGSAATGKLIYKRAAENLIPVTLE
                     LGGKSPCVVESDANLGVAARRIAMTKFSNAGQMCIAPDYLLVHQNVMDEFVSTLTATV
                     KQFFGDPPNSNEYGKIINEKQFDRLINFLNQGEIIFGGKYDKSKLFIEPTIFANVSLE
                     SDVMKEEIFGPILPLIGFSKAAEAKAIIEENPNPLAFYVYTSSARKEKFWLENISFGG
                     GCVNNSSWHFTNHHLPFGGRGMSGIGRYHGRYTFETFSHAKSIMKTPTWFDPKLRYPP
                     LKGKLEILKKLIR"
     gene            21425..22876
                     /locus_tag="VEV83_06055"
     CDS             21425..22876
                     /locus_tag="VEV83_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HYK44708.1"
                     /translation="MNIIIDEINALVSLSSDAAPTRIEQLPRSGSDRIYFRVFLNNES
                     LIATHNLNIKENETFLAFSRHFKSQCLPVPEILSVNESRTAYLQQDLGTISLLDKLEQ
                     QGRTAYVFDLYKKSLRKLASLQIKGHEGLDYNLCLTAKEFGKQAILSDLLYFKYYFLD
                     TLHLPYDKQTMLDDFDALATYLTKTEYKYFMFRDFQSRNIIVNEDEVFFIDYQGGMYG
                     ALQYDVASLLWQAKAQLSDEWKNVLLEYYMDVIDEFLVKPVDRNIFVGQYDGYVLIRL
                     LQVLGAYGFRGLFERKAHFLTSIPLALRNLRDFLENNRVGIVTPELTRMLDAITSAEI
                     IANFEPFQADEQTPLVVHINSFSYKQHIPDDDSGNGGGFVFDCRGILNPGRFEEYKYA
                     NGKQKKVIDFLEQRTRMNEFLSGVYDLVDISVEDYIKRGFSSLMINFGCTGGQHRSVY
                     AAEQTARHLKNKYKVKTEVRHLNEGNWKREDGI"
     gene            22882..>23022
                     /locus_tag="VEV83_06060"
     CDS             22882..>23022
                     /locus_tag="VEV83_06060"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HYK44709.1"
                     /translation="MLLAAGLGTRLKPWTDQHPKALAVVNGRTLLQRNIEYLQSFGIK
                     DVI"
BASE COUNT         6374 a         5072 c         5115 g         6461 t
ORIGIN      
        1 gcttgttgtc gtgagcgatt cgaattatca aaggcagcag gaaaaaggta attaggtaag
       61 caataataat tccggtcgca acttgtgtca tgtcgcaggt tttcgtgttg tgcgtgagta
      121 gaactctcag taaagataaa ctgtatcaaa cacagaaaaa atttttttgg ttgcttgcac
      181 aagcatgatt tagcattgat ttttctggag tagacggccg taatatgaga tccttattgc
      241 ggctattttt tttcttaacg aatcgttttt aaaactgcgt cattcacttt taccgggtac
      301 tttttcttta acccgtcaac ccattgctgc tcgagctgtt gctggtaatc gttgatgacg
      361 aggccacgtg cctcttcgaa acttcgcggc tcgggttgcg gaaatatttg catcacgtga
      421 acgaacgtga atgcatcgcc ggcatcgttt gcttccggat cagtttgaaa atctttttca
      481 aatttcaacg actgttttac aggtagctga tcggcctcaa acctgctgct gtcagcatag
      541 atcgtactgc cgtaaggtgt gatgatgtta cgccagtcgg cagggtgttc ttttaccctg
      601 gcggcaattt ctgtgatcac ggatttgtcc gggcctgaga tcacaacagc agagaggctt
      661 ttattccatt tatattgatc agcgtgctct ttgtaatatt gatttaaccc ggcagtatcc
      721 tcaggtgcct tgctccatac gtgtttgtcc atcacaaaaa acaacatgtt cgcgtcatta
      781 aattccttca actgttcttt tatcgaagga gcgaagtctt cgatgtgttc tttatagtaa
      841 ccctcgcatg aaccattcgt gaaatcgcgc atcatttttt catatcgacc ctgcggtgta
      901 gcctgcgtag ttccctgcat gaatcttagg taggcgatcc actcactcac aggtgtcttc
      961 tttttttcaa attcgaacaa ggtggtagac ggcttaatac ccttatatag agcaggcatc
     1021 gtatcctcat ccattttcaa agcactgtct gaataagccc aaagatctgc ctggttatac
     1081 ggctgtgctt tgaagtgtgt aagcgcaagc cacctcggta tcatcttttg tttcgcaaca
     1141 tccaggcggc cgtccttttt aatctgctcc tgcagataag cggcgctctc tacgtcgctt
     1201 tcgtcggtga ttggcggaat aatttctacc agcttaacaa tattgtaccc gtattctgtt
     1261 ttaaatggcc gtgtaagatc gccgggtttg gctagaccaa acacttcttt ttcgaagttg
     1321 ccgttatact gaccaacttt tatttcaaca gtgttcccct cctgtccttc gctgctatgg
     1381 ccatactctg cgagcaacgg cgtgaatgcg ccaccttttt gaagcacatt gtaaacagaa
     1441 tcggcttccg cttttgaagc agctttctgt tcatcgttaa aaaatggaag cacgggaaat
     1501 agtagttgtt gcaccttgcg tcttcctaat gcgggccgtt cggccgcgtc cctgaagatg
     1561 tgataaccgg ctttgctttt gtagatcgtt gaaaaacctc ctggtttcag ggaataaata
     1621 atgttttcaa ttgagtaggg caaggtaaat acagtcacat agccgatcgt tccgccggat
     1681 gcgcgcactg ctgaatcact ggaatatttc tttgtgaccg aatcgaagtt tttgccggct
     1741 ttcagttcgt tataagcttt tgagatttga gcgtaagctg cagcggtgtc tgtgccggcg
     1801 gccacaaaaa cctgttgcac taaaatgtct tttttgttgc gcagaaaagc ttcgtgaact
     1861 aactcgcgca gatcagactg gtcgttgata aaattttccg tcaactggtc tttgaaattg
     1921 tctgcctccg tttttatttg ttcattgctg tctactcctt cgtcgtaagc tgcctgtagt
     1981 tttaaacgaa agtttatgta caagtcaagg tactggcgca ttttttccgc cctgtcaccg
     2041 gttgtatccg ggttcttatt gtatgccttt agaaactcgt tcttgtctac tgcgtgggtg
     2101 ccgtatgtaa aaagggtttg tcctttcgcg tgtaaaataa aaagcaggcc gcaaaaagta
     2161 gcaatcagaa ttcttttgat tttcatatac agttattgcg acgaagaaac agattttagt
     2221 ttggtatcga tcaatccgtc atactggtcc aggctcaggc cttttgcaat gatccgtttt
     2281 ttctcgtcga gtaaaaaaaa tgttggtgtc tgggaaatat cgtagagctg ccggtaatcc
     2341 ggcaggttcg ctgcttccag ttgtgttctc cgttcttttg tttcataagc atggatccat
     2401 ccgttcagct tatgttctcc tataaatttt ttccagtcgt ccagcacata atcattaacg
     2461 caaacagcaa cgatcttcac cccttccgtt ttccattttg cctcgaaaaa cgaatcaagc
     2521 cttgggatct gcagttggca atggctgcaa tgcgggtccc aaaaagcaac aaaagtaagc
     2581 ggcgctttta tttcatacaa tgaaaccgat cggcccgcag tgtcggtaag atccagcggt
     2641 gccgcgggtt cattgatttg gtttgccata aggctgtatg ccctgtcaaa aatatatttt
     2701 ctctgctttt cgttcagcca cgtagtgtcg ccctttgcat aataattctg aaacaggaag
     2761 aggaacactt tgtcctgtcc catatattcg gggttgatgt acttgtcggt aaatttagca
     2821 agcaggtagt tatgaaggtc tttcgtttct cttgatgaaa gcaggatata atttacttcg
     2881 ttgatgatag aatccggatc cggtgcgacg taatatttga aatagtcgtc aagcttgggt
     2941 tcgaagaaag gagtatacag cagcatgtca tcattaaaat tcacattatc ccaataatgc
     3001 tccttcacaa aataaaatgg atagagtgaa tcgatctttc cattcgcgag tacgcgcggc
     3061 tggggccggt caggaatttt tgcgatctgc aacaaggcgg cgagcattga gttcggctga
     3121 ttatttataa cattgttcct gtattccgtc agcttgtttg aagcctttat atactcttgt
     3181 gtagccgcgg ctgagtcctg cggattcttc gcggttttta gctgttcctg aagaagattg
     3241 aggcttgggg aaatttgggt aaggaacacc gtgtaatccg cgaacagcgt gttatccggc
     3301 gagccggtga atttcacgtc tccgggtttt gttgaatctg aaacaaggct gaaatgctga
     3361 ccataatcca ttaataattc aaaaagaatt actttctgcg gagacacgag gaagtagatg
     3421 cccattggca gccttttggt acctctaaac tgcgcaatcc cttttttgtc ggctaatgct
     3481 gagtcaacta aaatcttttt cttgccgtaa tagctgccca aatacaacat cgagtttttg
     3541 aaatcagtgg aagccgtgat ctcgtatcct tgtggcggtg tttgggcttg tgcgggatca
     3601 gtgaaaatta tagaagaaag aattatcacc gctgctgtaa atcgcctcat ccttttaaaa
     3661 ttggcgtaaa tatattccaa tatccatttg cttttgttaa gcgtatgtaa aacagcgcgg
     3721 gcacggctac ctatgtgttt gttgttgatt cggtcccggc aaaaaaacca gcattgaccg
     3781 cttgcgttga tattttcctg cttcttaaat actgtctgtg attacgcgtg gcgtttgcca
     3841 gactcctaca tgaaaagtat ctatgtgcac tgaatgaggt gcacgtaacg gtacatctga
     3901 agatttggta cagcctgttc caattaccgt aaaacagatc gtgataatta ttgcggagat
     3961 gaaagttttc attttaaaaa aatttgcctg ttaaaaaatt tattgatcaa gtccaggaca
     4021 aacctgtata aattaatcgt gacgcagcct cttcagggaa acaatcattg gattttgttt
     4081 agctttttcc ttcgccccat ctgttacctt tgcccggtga ggcgtaataa agcaccggtg
     4141 atcttagaag agctccgcat agaaaattat gcggccgaag gaaagtcatt ggcgaagctt
     4201 aacggtaagg ttgtatttat tgagaataca gttccggggg acattgtgga cgtccaggtt
     4261 tttaagaata aaaaagactg ggccgaaggc tttccactgc gttttcgaaa gttttcggaa
     4321 gaaagagtcg accctttttg tgaacatttt ggcgtgtgcg gaggttgtca atggcaaatg
     4381 ctcccgtatg aaaaacaact gcattacaaa gagaaacagg tcggcgatat gatggcacgt
     4441 attggcaaga tacaggcgcc aaccattttg ccgatcattg gcgcggaaga gtcgcggtac
     4501 tatagaaaca agcttgaata cgctttttca tgcaagcagt tcataccgga gaatgaattt
     4561 agaaaactga tcgctgatgg cgctaatgtg aaagcggtcg ccataaaaag tgtagcagga
     4621 ttttacgcaa agggggtatt tgataaagtg gttgagatca aaaagtgctg gctgcaaagc
     4681 gagccaacaa acctgctacg aaacgcgatc gctgaattta gccgcgaaca aaatttccat
     4741 ttttatgact tccgcgagca caatggatgg ctgagaaata tgcaggtacg gatggcgacc
     4801 accggtgaga tgatggtgaa tgttatcatc acagatgagg accgtaaacg gatgcagcct
     4861 ctcttcaatt ttatacaggg ccatttcccg caaataacaa cgctgttgta caccatcaac
     4921 gctaagagaa acgacagcat cttcgacctc aatccgcaga ttgtatttgg aaaaggttac
     4981 atcatcgaaa agctcgaaaa ttttcaattc aagatcggtc ccaaatcatt ctttcaaacg
     5041 aacaccaggc aagctgaaaa attgtacagc attacccgcg aatttgccgc attgaccggt
     5101 catcaaactg tgtacgattt gtattgtggt accggcagca taggtatttt tgtaagcggt
     5161 tctgcaaaaa agatcgttgg cgttgagctt atcgccgagg ccattgccga cgcaaaagaa
     5221 aatgcagcgc tcaacaacat cagcaatgcg gtgttttaca aaggggatgt aatagatacc
     5281 tgcaccgaaa cattttttga agaaaacggg aatccggacg taattatcgt tgatccgcct
     5341 cgtgccgggt tacacggcaa actggtagaa aaactattac aggtaagggc gcctgttatt
     5401 gtatacgtga gttgcaatcc tgccacccag gccagggata tcagtatttt gaaagatgcc
     5461 tattcggttg aaaaaattca gcctgtcgac atgtttccgc atacgcatca tattgaaaac
     5521 gtaatgcaac taaaattgaa aacagaataa caaaattcaa tgagagaatt cagaccgggc
     5581 agtttccaga tcttacctcc tgtcatcaaa aacctgatca tcattaatgt ccttgttttt
     5641 ttgatccaac aaacggtttt gcacgtcaat cacaccacga tgatggaaga cgtttttgcg
     5701 ttgcatacgt ggcaaagttc gcggtttcgg atctggcaat tttttacgta catgttcctg
     5761 cacgatacct caagcatatt gcatctcgca ttaaatatgt ttgcgctgtg gatgtttggc
     5821 tctgtcctgg aaaacctttg gggcccaaag cggtttctca ttttttatgt tgtttgtggt
     5881 ttgggcgcag cattatgtca tatggcggtg ctctatgtaa atgctgaaca tttgctgagg
     5941 gactattatg tattacaaca gcactttaca ctcgaaaatt tcactaatta ttatagaaaa
     6001 gaaaatatcg gtgcttttta tgaaggtgcc ggcgatgtac tcaatcaatg gcagtcgaat
     6061 ccgggtaacc caatctttgc acagcacgcg tgggggatgg taaatcaatt tgtgaatgac
     6121 aatctgaacg gatcaacaat cggcgcgtcc ggcgcagtat ttggatgcct tgcggcgttt
     6181 ggctatttat ttcccaacac ctatttatat gtctatttcg ccattccggt aaaggcaaaa
     6241 tgggtggtgc tgatttatat cgccatagaa ctgtttgcca ccgttaacac cagcgcaggc
     6301 gacaatgtcg cccatgtggc gcacctgggt ggggcacttt tcggtttctt attggtatac
     6361 ttttggaata aaacaaacag acgaacgttt tattaaataa ttttgaattt caatcttaat
     6421 ctgcaatgtc agtaagagag cagaatagaa gaaacccgat actgttggga caggacaata
     6481 atgcacttac gtggcttatt atcatcaacg cggtcatgtt tgtgaccttg cttttcacga
     6541 aggtgatctt tcaaatgagt aatggcggtg atctgcagac ttttcaaacg cagatcctca
     6601 attggttcgc cttgcccggt gcaaccgaca aaattctgag ccggccatgg actgtgatct
     6661 cttacatgtt ctcgcacgat agcatttggt atttcatcag cagcctgctg tggctatggt
     6721 gctttggata tattttgcag gacctcgcgg gaaacacaaa attattccca atttacctct
     6781 acggaggtat actaggcgcc attggattcg tgctggccgc aaacttgctg cctggcttac
     6841 aaacaaatat tcagtcgctt tctgttatgg gtgcggccac ctccgttgtt gcagttgcaa
     6901 tagcaaccac gaccctctca cctaattacc gcatcttccc aatgttgaac ggcggtatcc
     6961 cgctgtgggt cgtcacgttg gtttttattg cagtggactt cagtaccatc ggcatcacga
     7021 atagtgcagt cgctattgca caccttgcga gtggtctcac cggttttctt tttatcagcc
     7081 aggtaaagaa aggaagagat ccgggcgcgt ggatgttcgc agtttccaat tgggtgaatg
     7141 atctttttaa cccggaacaa aaacgaaggg atgaacaatt ccattacaag gcaactcgca
     7201 aacctttcga aaaaacgcca cacgtaacgc agcaaaaact ggatgagatc ctcgacaaga
     7261 tcaattcaca aggataccat tttctaacgg aggaagaaaa ggagttttta aaaaaggcga
     7321 gccaggaaga tttctaaatt tccgctgcca accactgcat gagatatttt cttaagactg
     7381 cctggactgc ctcgtgcttt tttgttgttg cattattcct tgtctcatgt tgcaccgcat
     7441 atatttcccc ggagcgattt tcttatatta cattattcgc aattgcattc ccatatttgt
     7501 tcgcgctcgt actgctcctc gcatttatct cgttttttgt aaagaggccg ttagcaatca
     7561 tgttgctgct ggcactgatt gctggctaca ccaatctttc acgcacaatt gcattccatc
     7621 gccagcaaga atggcagacg acaaaacatg attccgcatt aaggaccttc acgtggaatg
     7681 tgcagtattt cggaagtatc gaagacggca cttacatgga tacggaaatg atcgctctta
     7741 ttgccgacta caaaccggat gtggtttgca tgcaggaatt ttcaaacacc gaaaatggaa
     7801 gccgcagggc gtcaatccgc gaagaaatga acggtctcgg atacaagttt tatttttttt
     7861 caaacgacag ggtgatccgt ccgaagaatg ccactgttac tgacggcgtg gccatgtttt
     7921 caaaacttcc gtttactgac agcgcacgga tcaatatcaa caaagaacaa aatgaaaact
     7981 taatatatgc gtccgtaatg tttaacaaca agccagtcag aatttatacg ggccatcttg
     8041 catcatttga tctttacaaa gacactgctt cgtcacaaaa agatatttat caaatcacct
     8101 atgaccgcaa gagagctgtt caatacaagc ttcgcgaaac agaacagctc caccagcagg
     8161 aggtgagtat cattcggaat tcaatctcaa aaagccctta tccggtgatc tatgtgggcg
     8221 atatgaatac aactccatgc tcatacaatt atcgtttgct aagaaataat ttccaggatg
     8281 cgttccttga aaaaggttca ggttttggtg caactttcta taagatactg cctacattgc
     8341 gtattgacgt gtgttttgca gacgccagtt ttcgcatcaa ccagtgcacc gtcgtgaagc
     8401 gccaattatc agatcactat ccgctggtaa cagatattag ctggaaataa atcagtgttt
     8461 aattcgttat tttactcatg gctggcggcg ttctaagacg tactgtaaaa aaatttctgc
     8521 ttatactgac gatagtcgtt tgcactattt attcacttac actcttaatt ccctatttga
     8581 acccgcaacg ttggtggctg atcggtttcc tcggtcttac ttttccatac cttttctttt
     8641 tgttggtctt tgtcttcttt ttttggctga tggcaaagcc aaagctcgcc tgggtccctg
     8701 ttttggcttt gctgctgggc gcaaagcaga tcgcggtaac gtttgcagtg catataacaa
     8761 gtaatgatat aaacaaaaaa cccgagagca gcattcgcct ggtaagttgg aacgtggcaa
     8821 acatgtatgg gttaagcacg aataaagaag ttaaacaaca taaccgccgg gaacttgcac
     8881 aaaccattct cgaccttaag cctgacatca tctgcctgca ggaattcaat cattcgtata
     8941 cgcagggtga acaggccgac aatattgggt tgttcagcaa acaatatcct catttttatt
     9001 attcgatcga tttcaacaaa caaaatggat attacacttc agggtcggtc gtattttcca
     9061 aatatccgat catagattca ggccgtcgcg attatcccgg cacttttaca ggcagtcttt
     9121 tatatgtcga tatcaagatc ccggctgata cgatcaggat ctataccacc cacctgcagt
     9181 cgttcgggtt caatacagaa gattatgctg atatgaataa gataaaggag cagaacgacc
     9241 aggcgataga agcctccaaa aacattttca acaaaatgaa gggcgcattc acaaaccggg
     9301 gcatgcaagc cgatcttgtg cgagagacga cggacgtgag cccgcatgcg tcgatcgttt
     9361 gcggcgattt caacgatgtt ccaacctcct acacttattt tcatattcgc aatcagcgac
     9421 aggatgcgtt cctccaacga tcgctcggcg ttggttcaac atacaactcg atcgcaccga
     9481 tgctgcgcat agattacatc cttcccgata cttccttttc catacaacaa tttgacatgg
     9541 tggatgagaa tttgagtgat catcaaatgc tggtgagcga cttaaagctg aaacgataag
     9601 ctatcaaagc catcaggctg tcaccgattt gcgttgaaac gttatttttg ttgcggttgt
     9661 tcttgcgtga cacgcaatta aataagatgg cgaattggac aatctttatt gaatcagggg
     9721 caatacgttt taaaattaaa aataaccaat gggcgatttg aaagtttata attcactgac
     9781 gaggcaaaag gaagttttta aaccaataac tgcgggccac accgggatgt atgtatgcgg
     9841 gccgacagtt agcggcgaaa gtcacctggg gcatgcaagg ccttatgtta cattcgacat
     9901 tgtctaccgc tggttaacac atcttggtta caaagtgcgt tacgtgcgca acatcacaga
     9961 tgcagggcac tttgaagaag aaggccgtgc agcggaagac aagatctcaa aaaaagcagt
    10021 gctggaaaag ctcgagccca tggaactggt tacaaaatat actaacctgt atcattgggc
    10081 tatgcgaaaa atgaacaacc ttgacccaac gatcgaacca actgcaacgg ggcatattgt
    10141 agagcagatc ggcatgatag aaaaaataat tgcggacggc tatgcgtacg taataaacgg
    10201 ctcagtgtat ttcgacgttg aaaaatataa taccgaattt gaaaaacgcg gcgaacctta
    10261 cggcatcctg agcggcagag ttttggacga aatgatcgag acaacacgcg acctcgacaa
    10321 ccaggaagaa aaacgcaata aagccgattt cgccttatgg aagaatgcgc cgcccgagca
    10381 tatcatgcgc tggaaaagtc catggggcta cggttttccg ggttggcata ttgaatgctc
    10441 ggcgatgagc actaaatatc ttggagaggt attcgatatt catggcggcg gcatggacct
    10501 gcagtttccg caccatgaat gcgagatcgc gcagagtaat gtttgcaatc ataaaattcc
    10561 cgcgcattac tggatccata acaatatgat cacgatcaac ggaaagaaga tgggcaaaag
    10621 ctataacaac gtgatcacgc tcacagaatt gttcagcggc tcgaatgcct tgcttgagca
    10681 agcttacagc ccgatgataa ttcgcttttt tattcttcaa acgcattacc gatccacgct
    10741 tgatttcagt aacgaagccc tgcaggcatc ggagaaaggt ttgaaacgtt tatgggaagc
    10801 gtacgaaaat ttgagcaaga tccaaacggc aacaggcagc gcacaagaca gcgcgctcga
    10861 tgcaaaagtg aataagctca tgaacgagtt cgaggaattt ttgaatgacg atttcaatac
    10921 cgccaaagtg ctcgcgaata tgtttgagtt ggtccctgtc atcaacggaa ttaaggacaa
    10981 acatctaccg gctaatgcgc taagcgcccc aaccatcgaa ttgctgaagc aaaaaatgaa
    11041 actgtatgtt gaagatatct tgggattgaa gatggaaact gctgcagata acagcaagct
    11101 tgatggcgtg gtgcagcttc tcatcaggat ccgcaaagaa tcgagagcta agaaagatta
    11161 tgttacgagt gataagattc gtaatgagct gcaaacgctc ggcatacaat tgaaagacga
    11221 aaaggacggc aatataagtt atacgattaa ttaaagtgcc tgggcaccgg taccctgtga
    11281 tgtggctcct ttccgattca aagcttgcgg taacacaaaa gcctcgacga tcgtccggct
    11341 accaactaac tttctattac taacagccac catttaagca tgaacagggt caacatgttg
    11401 cagcaagtcg cagaaagcaa aacatgggac gtactgatca ttggcggcgg cgcaaccggc
    11461 ttgggagcag cgctcgattc agcatcgcgc ggttactcca ctttactttt agaagcgagc
    11521 gattttgcca aagggacctc aagccggtca acaaaactcg tgcatggagg tgttcgctac
    11581 ctggaacagg ggaacatcaa gcttgtgcgc gaagccttgc gagagcgcgg atggctgctt
    11641 caaaacgcgc cgggcattac gcaaaaacgt ggcttcataa ttccggcctt ctcgtgggta
    11701 caaaaaattt attatggcac cgggctgaaa gtttatgata cgctttcggg caaattagcg
    11761 ctcggcggaa caaaattttt gagcaaaaag gaaacaatca aattcctccc tggccttatt
    11821 gataaaaaat taaccggcgg tattgtctat ttcgatggcc agtttgatga tgcccgcctg
    11881 gcgattgcgc tcgcaaaaac tgcggtgcaa catggagcgg ttcttctgaa tcatttcaaa
    11941 gtaatttctt tattgaaagc aaatggaaac gtgggcgcag tggcaggcgt cgacacgctc
    12001 agcaggaaaa tttttgaaat aagggctaaa acggtgatca atgcaacagg agtctttaca
    12061 gatgacatct taaaaatgga tgacggcaaa gctgaagaga tcgttacacc ttcgcagggg
    12121 attcacctgg tagttgataa aaaaaatttt cccggcgatc atgcgctcat gataccagaa
    12181 acggatgaca agcgtgtgtt attcgctgtg ccatggcata acaagctttt gatcggaaca
    12241 actgacacgc cggttgaaca tacatcgctt gaaccaagac cgcttgaaga ggaaattcag
    12301 tttgtgataa aacatgcaaa ccggtactta agagccggta ttcaagaggg cgatattacc
    12361 agcatgtttg caggtttaag gccgctggtg aagatgaagg gcgttaagaa aacgtcgttg
    12421 ctcagcaggg accacacaat aattgtttcc acatcgggcc tggtaagtat aacaggtggc
    12481 aaatggacca cgtaccggaa gatggcggaa gacgctgtaa acaatgcgat cttcgttgga
    12541 aaatttcggc acgttgactg taaaacgcag catcttccaa ttgagggcag caaatttgat
    12601 cggcttgatt attccaacga agcaaccttg gaaaaaattt attcaactga aaatatacgc
    12661 agcttcatcc aggatgaaat ggcaatgacg gtggaggatg tgcttgcaag aagaacaagg
    12721 ctacttttcc tggatgccaa aaaagcgatt gagttcgctc cgctcgtggc tttagaaatg
    12781 gcgacggtat ttcagcacga ccaacaatgg atccaaaaag aaattgataa tttcatttca
    12841 ttagctcaga actatgttcc gcacctaaaa cttaaaggtt tgaatcattg aaacaattaa
    12901 acttctaaaa catgactgct tttacaggcg agatcgttgg aaccgcatta ttgatcattc
    12961 ttggcgacgg cgtagttgcc aatgtgctgc ttaataagac aaacggtttc aatagtggct
    13021 ggatcgttat taccatgggc tggagtatgg ccgtttttac aggcgtgttt gtaagcgcgg
    13081 cttcaagcgg tgcgcatttg aacccggctg ttacaattgc acttgcttat gccggaaaat
    13141 ttgactggag tttggtgccc atttatattg ccgcgcagat gatcggcgcg atgatcggag
    13201 ccttcgtagt atgggtcgcg tataagcaac attttgacgc tacggaaaat gtttctcata
    13261 aacttgctgt attctgtacg ggacctgcaa tccgaaaccc ggttcataat tttataacgg
    13321 aggccatcgg cacgtttgtt ttgatctttg gtgtgctttc tatcatttcg ccggcgaata
    13381 gcctcggcgc attggatgca ttaccggttg cattgcttgt gctcggcatc ggtttgagtc
    13441 ttggcgggcc aaccggttat gcgatcaatc ctgcgagaga cctgggtcca cggataatgc
    13501 atgccattct tccaataaaa aataaaggaa caagtgactg gagtcacagt tggataccgg
    13561 tgctcgggcc aattgtcgga ggtttaattg cggctgtgtt gtttcaggtt ttgcattgat
    13621 tccactcaat ggatccttct tgtgttagaa gagtacttca tttcatggtt cctcatagca
    13681 ctatccctag cgatcgcgaa atttcgttgt cggtgagtca cttttattga aagcacttaa
    13741 tcaacatttg cagaaaatcg tcggacttta aaatcgagcc cgagaaagaa caataagata
    13801 aaaggcccta tcgaaatttt ggtaacttca tctttcgcgt caatgactcc ccgccaaaaa
    13861 atattgaaat ttctttaccc gctttttgtt ttgatcaaca agacaaacaa aagacacaac
    13921 aagatccttt acaacgaaaa aaatgttgcc ccagccaact caatctatga actttcagtt
    13981 caattaaata acggcgggat agaatcgttg tcaaaatacc gcaacaagaa aattttattt
    14041 gtgaatactg cttctgattg cgggtacaca aatcagtatg aagcactcga atcactttat
    14101 gaaaaaaatg cagataaact tgttatcatc gggttccccg caaacgattt caaagagcag
    14161 gaaaaaggca gtgacgaaga gatcgcgcag ttctgtaaaa tacattacgg agtaacattc
    14221 cccctggcaa aaaaaagcac ggtgcggaaa agcgatcagc aaaatgaagt tttcagttgg
    14281 ctgtcggata aaaacaagaa cgggtggctt gacaaagcgc cgcagtggaa tttcagtaag
    14341 tatttggtga atgagcacgg cctgctcact cattattttg agccggcaat tgagcctttg
    14401 gctaaagagt tggccgaggc cattcaatca taggtgttat ggcaatagca ttaataaccg
    14461 gcgcgtcgtc gggtataggg tttgaacttg caagagagtt tgcaaaacac aggcatgacc
    14521 tcgttttagt tgccagaagc gaggacaagt taaccagttt ggccgacgat ctgaaagcgg
    14581 ctcaccacat caatgtgcac gtgctcgcga aagacttaag caacgcaaaa caagtggatg
    14641 aagtatacgc ttatacccaa cttcacaatc tgcaggttga ttttctcgtg aacaatgcgg
    14701 gctttggtga ttacgcctat ttttatgacg ctgactggag caaactggag tcgatgctcg
    14761 atgtcaacat aaaagcactt acacgtttaa gctggttgta tgtgagggag atggtaaaac
    14821 gcagatccgg acgactaatg aacgtcgcgt ctaccgcagc atttcagcct ggtcctacaa
    14881 tggccgtata ttatgcgacg aagagctatg ttttatttct tagcgaagcg atggcaaatg
    14941 agctgcaggg taagggtgta actgtaacag cattatgccc cggtgcaaca gaaagcggtt
    15001 tccaggaagc tgctgacctg cacgagagcc ggcttgtaaa aggaaaaaaa ttaccgacca
    15061 gtgccgaagt tgcggccttc ggatacaagg ctatgatgcg cggaaagaag gtcgccattc
    15121 atggcgttgg aaactattta ctggcgcaga cgcccaggtt ctttccgcga aatatggtaa
    15181 caaaagttgt gcgtttgatg caggaaaagg cggaataaac aaggcaggaa ctattctcaa
    15241 ttacatgctt tatctgcaca acagctgctt gcgaaagcct caggcttcgc cttgaacgca
    15301 aatcccattc ccataatata tcccatcgcc tcgcgcagcg cgtcattact tttgaagtgt
    15361 ggatttgtat taatgtcagc gtgcacctcc atatccacat cgtattgaat aaaaagatta
    15421 caaagttcgt aagccacttc aatgctctta gctacttcaa ccagcatgcg ttcttttatg
    15481 ttgtaccgct gcctcgtctt ttcattatgg ataaacataa acccgccgtt gtgctcacgt
    15541 aagaaaacga tcacagttgc aaattcggtt tcatcacttt tcacctggct gtcggttcca
    15601 atacaaactt taagatgcac acctttatca tgctcccgtt taatagcctc ttccaccgcg
    15661 tctttgatcg gaatgtggat ggtttcaccg ttaaatcttc tccagcgcat aactaaaagt
    15721 tttccaagat acaaacagaa aattaaatcg gcatcaattc ccgcttgcga gattatcaac
    15781 agacgtggaa aagcgcagat ttgctgcaac ccgaccaatt tttaaaattt tctttacagg
    15841 tacgattctc tggagacgaa aaagcccaaa gcgaagcttc gggacttttt ctttagcata
    15901 ccccctgaaa aaaaatcatc gtgttagcat attagcttag tcgcaatttt tttccaatcc
    15961 ataacaagct tttaaaaata attgcgggcg gcggttgcaa ttattaatgg ttgcctccag
    16021 ccgttttttg gtcgaactaa cggcgattct atttttttat tcgcacctgc attgcatagt
    16081 tgtaagtatc aagtggcatg aaactgattt tttcgcgggg cacataagaa aaatacttat
    16141 agatcctttc ttttgaaaat cgttgcgacc aaaacttttc cttcgtagcc gtaaaactat
    16201 ccttcgcatc tgtgataacg ctcatgccca attgccggta aaaattttcc tgtcgcagcc
    16261 gcgtcgcatc attatcaata tagcatgcgc cgagcacgat ctcgccgcct tcatgcagca
    16321 aattgtaagc cgctgaaaat attgcaataa atttttcgtt cgtcgtgaga tcaagccttt
    16381 gtttagaggg atcgtaggtg tcgaaagaaa aatcgccagg ataaaaatta ccgggcgtga
    16441 accaggtagt caatatgaca tcgtattttc tgttaagtgc tgtaaggtca tctgcttcca
    16501 aaaagtgaac aaaaaattta tcatcgatct tcagatcggc tgccaatttt tttgagagat
    16561 ttatgcaggc catcgcgttg tcaatgccat cataacgatc gatcatgttc catatctcag
    16621 gtattcctgc cagatgtttt ggaactcgtc cgctgccaac gccaatatcc agcatcgata
    16681 tgtttcgctt ttgccgatcg tataatgctg ttatgatctt tttcagttca ataaattccg
    16741 cccattgcgc ctgtagtaat tcttcgggca ttgattcggt gtcaaaagac cgttgcacgg
    16801 agtcttcgct ttcataaata ctcatattct ggaatattat gttctcgaat gccaaaataa
    16861 aactgcctcc ttgcaggaag cagttctgtt atccgtttta ttatttttca gtgacgaggt
    16921 agcagcgcga aaagggtcgc ggcgaaactg ccacttattt ttaaaaatta atgcccagcc
    16981 tcgcaaacag gtgcatgccg ttttgtccca tctgcacagc atcaaaaggc ccaccggttt
    17041 cattattaaa agcccaatag cttgctccgt gagcataacc taaatccggg tgcacgttca
    17101 acaagttatc ggcgcccaca taaagcgttg cggccttggc cagccgatat gataaatata
    17161 aatcggttac tacttttgct ccataattgt actggtctgg aacatacaca ttctcatcag
    17221 cgtcggtcgg caccattgga tcaatcccgg atccatcttc gccatatcca agcaaaataa
    17281 ctctgccgaa gtaagtaaag cgtgtaccga ttccaaattt gtcaacagta tagtcaagat
    17341 ttagggaaaa ttttccggga ggtgctgaag cgagaatgaa tttttgttcc cggtcgctta
    17401 agaatgtttc ctggtgttgt tttgtatcat taagtttttc gggtacgttt atttgatcga
    17461 tcgtcatgtt ttgaaaatta cctgtgaaca acgccctgaa atgctgggtg ctccattgat
    17521 gattataatc aataacgata tcgactccct tgtttgtcgt gttcacggca tttgcaaaaa
    17581 attgcgcata agccacgttg gcattttgta atgcatttgt taagtcctca tccagtgtgg
    17641 ggtccgtagc atcgaattgt cccgacaaca caacgcgatc tttgatcttt acataatatc
    17701 catcgacagt aatggtaagt tcttttgtag gcgtaaaagc aaaacctaaa cttgcggtaa
    17761 cagatttttc ctgtgtaagg tttggaatac cggcagcttt tgccaggtcg ctgtaattag
    17821 gcgcgatctt cacttccgaa atgacgccac cctgtaccgt tgtaaaggtc gagctgtaat
    17881 ttatttgctg aagtgaaggc gcgcggaaac ctgtgcttac agaaccgcgc aagttgaatt
    17941 tcggtgcaac cttataccgc atcgccaatt tataattgct ggtaaagcca aaatcactgt
    18001 aatcctctgc gcgaatggca gctgcgatga ggaatgcttt tgtgacgtca aactcagcat
    18061 caatataggc gccaatatcg gttctgtttg cgtctaccac atcgccgggc tgataaccgg
    18121 gaaaaccctg tgagccacca gctttaaagg ttgtgtcaag acctacaaag acctggtcgt
    18181 cgtcgaatac actgtctata ctaacaaaag aagagccgta tgttttataa gagccttctt
    18241 cgcctgcttt tatcttataa tcttcgtacc ggaactccgc tccaaatgcg agattaaaac
    18301 ctgcgcccac gccggaaatt tttttactga aattcaaatc ggttgtgttt tgcaaaaaag
    18361 taaatccacc atcgtcgaaa tgagtttgat ccgggcccaa cgatgcatta aacgttttgt
    18421 caccataaaa atgaaaatca ttattaccga tagcgttgct aagatcccag ttccatccac
    18481 ctgcagtagt cccttttata cctgctgcca gcgatgcatc gcttatatgt gtttgtataa
    18541 tcggattgta ataggtttct tcatcggcat ttgttttcat tatctcggga ttgaaaataa
    18601 gcggggctga attcgttgat ggatcataat tgccggttgg gaaacgatct ggtcttgcag
    18661 aaaagtttct tgtaaacgca taagcatttg acaggttata attgtatccg ccaaaggcat
    18721 aaaagcttgt tttgctgttt gcattcaaag gaatttccat gttgaacata gcaccagcat
    18781 ctgtcatcga cccgtctcca tttgcccggc gcacactgtt tatcggcaac gtgccattgt
    18841 cctgtcggaa cgtttttcca tttaaaacta ccgatcccgc aagattgaaa aatccaccgt
    18901 ttttcccgac actaaatccg taatcagcat tgaaatcaaa agcatttcca tcaatcgcag
    18961 catgtttata gtattcatta tcatcgtcga aaaagtgagg attgtatttc ttatcataat
    19021 agccgctcca acccacattt cccgtaaaat gacccacatc ttttttgagg atgatattga
    19081 taacgccggc aattgcatca gaaccatatt gcgcagacgc gccgtcgcgc aggatttcaa
    19141 ccctatctat cgatgaaaca ggaatcgcat taagatctgt tcccgaatta ccacgtcccc
    19201 ttgtcccaaa tacggcaacg aatgccgttt gatgacgacg ttttccgttc accaaaacga
    19261 gcgtttggtc agggccaagt ccgcgtaatg tggcaaggtc aatgtgatcg gcaccgtcgc
    19321 tcccgctttg cttgttataa ttaaatgatg gagcagcata attaagaaca tcggttattc
    19381 ccattcttgc actagggagg cggctccgcg atacgttgac gacgtcaatc ggaaccgtgg
    19441 tctccgtttt tatgcggcca ccgctccggc tgcctaccag gacaacttca cccagttcag
    19501 taaatgcagg ctgcaactca acggaataaa aggattgatc tcccacggta actgtttgca
    19561 tcgtgtaacc aacataactg atttcgatta catcgcccgg ctgtgctgta acggaaaagc
    19621 cgccgtccgc tttggtaaca gcacccatgc ctgagttttt tatttttaca ctcacattag
    19681 aaagtggtgt gtgagttgaa gcgtcaatga tttttcctgt gattgtacgg ttttgtgcaa
    19741 ttaaagtctg cgtgatcaga agcagtgcag tcaaaaaacg aagttcgagc gatgtcatag
    19801 cagtgtttta agacgaaaat acttcgattc ctgttatgca ttgcgcgttc ggagcaggat
    19861 gtcaataact ttcatataac tctaaaaaag cttttgagtt atttccgggc caaaatctat
    19921 ctaataagtt tctttaagat ctctagcttt ccctttagcg gtggatagcg aagcttcgga
    19981 tcaaaccacg tgggtgtttt catgatcgac tttgcatgac tgaatgtttc gaacgtatac
    20041 ctgccatgat atcttccgat cccgctcatc cctcttcctc caaacggcag gtgatgattc
    20101 gtgaaatgcc aactgctgtt gttgacgcag ccgcctccga atgaaatgtt ttccagccag
    20161 aatttttcct ttcttgcaga cgaagtataa acgtaaaatg caagtggatt tggattttct
    20221 tcgataatcg cttttgcctc ggcagctttt gaaaaaccga tcagcggcag gatcggacca
    20281 aaaatttctt ccttcattac atcactctct aaggaaacat tggcaaagat ggttggctca
    20341 atgaacaact tcgacttgtc atatttgcca ccaaagatta tttcaccctg gttcaaaaaa
    20401 tttatgagcc ggtcaaactg tttttcattg atgatctttc cgtactcgtt actatttggc
    20461 ggatcgccaa agaattgctt gaccgttgcc gtaagcgtac ttacaaattc atccataacg
    20521 ttttgatgca ccaataaata atcaggtgct atacacatct ggcccgcgtt ggaaaatttg
    20581 gtcatcgcga ttcgcctggc ggccacacct agatttgcat cactctcaac aacacacgga
    20641 cttttccctc caagttctaa agtaaccggt attaaatttt cggcagccct tttgtagatc
    20701 agcttgccgg ttgcggcgct gccagtataa aagatatggt cgaaaacaaa gttgctcatc
    20761 aattccggca ctatcacatg accttctcct tccacgtaaa gaacatattg ttcgggaaac
    20821 gctttctcaa tgatctttcg gatgacggcg gatgtcgccg gcgaaaattc actgcctttt
    20881 aataccgcgc aattacctgc ggcaatggct cccaccagtg ggatcaacag tagttgcagc
    20941 ggataattcc atggccctat aatcatcacc acgcccagcg gctcgtacaa tatgaaactt
    21001 gacgaaggaa gatttagtaa gttcgtccgt acccgtttgg gcttcatcca ttggtgcagg
    21061 tgcttgaggg ccgtatttat ttctgacatc aaaagccccg tttcagtagc ccaggtctct
    21121 tccttacttt ttttcaggtc aagaaataat gcttcattga tctcctcttc atatttcagc
    21181 aggaatcgct tgaggttcaa tagctgctct tttctgaaag catacgttct tgtcgcacct
    21241 gatctaaact gatctctcat tgccaggagt cgcccgccga gcccggtatt taattttgtc
    21301 tgaaccatct catgtttagc taactttcat aacaaatctt tcgttaacat gtaagataga
    21361 tattcttatt gaaaagaaat ttgcgagtac atttatcgcc cgttttctca cagaacacta
    21421 atgcatgaac attatcattg acgaaataaa tgcgctcgta agtctttcgt cggacgctgc
    21481 gcctacgcgc atcgaacaac tgccacgcag cggcagcgac cgcatttatt tcagagtttt
    21541 tctcaacaat gaaagtctca tcgcaacgca caacctcaac ataaaggaga atgaaacctt
    21601 tcttgcgttc agccgccatt ttaaatccca gtgtttgccg gtgcccgaaa ttctttctgt
    21661 aaacgaaagc cgcaccgctt acctgcaaca ggatcttgga acaatttcac tgcttgataa
    21721 attggaacaa cagggacgca ccgcttatgt atttgacctg tataaaaaaa gtctgcgcaa
    21781 attggcgtcg ctgcagataa aagggcatga aggccttgat tataatctct gtttaacagc
    21841 aaaggaattc ggtaaacaag ccatcctgag tgacctgctg tatttcaaat attattttct
    21901 tgatacgctg cacctgccgt atgacaagca gacaatgctc gatgattttg acgcgctggc
    21961 tacatacctc acaaaaaccg aatacaaata ttttatgttc cgcgattttc aaagcaggaa
    22021 cataatcgtc aacgaagacg aggtattttt tatcgactac cagggcggaa tgtatggcgc
    22081 gttacaatac gacgtggcca gccttttgtg gcaggctaaa gcgcaattga gcgacgagtg
    22141 gaaaaatgtt ttgctggaat attacatgga tgtgatcgat gaattcctcg tcaaacccgt
    22201 tgaccggaac atatttgttg gccaatatga cggatatgtg cttatccgtt tgctgcaggt
    22261 gcttggagcg tacggcttcc ggggtttgtt tgaacgcaag gcgcattttc taacaagcat
    22321 cccacttgcg ctgagaaatt tgagagactt tttagaaaac aatcgggtcg gaattgttac
    22381 gccggaatta acgagaatgc tcgacgctat aacaagcgct gagatcattg ccaactttga
    22441 acctttccag gctgacgaac aaacgccgct cgttgtgcac atcaatagct tttcttacaa
    22501 acaacacatt ccggatgatg atagcgggaa cggcggcggt tttgtttttg actgccgcgg
    22561 cattctaaat cctggccgct ttgaagaata taaatacgct aacggcaagc agaaaaaagt
    22621 tatagacttc cttgagcagc gcacgcgtat gaacgaattt ttaagtggtg tctacgatct
    22681 cgtcgatatt tcagttgaag attacattaa aagaggcttc agcagcctca tgataaattt
    22741 cggctgcacg ggtggtcaac atcgaagcgt gtatgcagcc gaacaaactg cgcggcattt
    22801 aaagaataag tacaaagtga aaacagaagt gcggcacctg aatgaaggca actggaaaag
    22861 agaggatgga atatgaaagg gatgttgctc gcagccggac taggcacccg gttaaagccg
    22921 tggaccgatc aacacccgaa agcactggcc gtcgtcaatg gccgcacttt gctgcaacgc
    22981 aacatcgaat atctccaatc attcggcata aaagacgtta tc
//
LOCUS       DASQJI010000205        16698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1402208,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000205 DASQJI010000000
VERSION     DASQJI010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 16698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16698
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402208"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VEV83_06065"
     CDS             complement(<1..341)
                     /locus_tag="VEV83_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HYK44710.1"
                     /translation="MDRCINVLHQWGFLVKKGKTLNNQYHYFSGTDEERLQDLQQMLD
                     DENVKAIFCARGGYGLSRIIDELNFDRFVDNPKWIIGYSDITLLHAHIYSNFRIASLH
                     APMAAAFNEFD"
     gene            complement(468..1649)
                     /locus_tag="VEV83_06070"
     CDS             complement(468..1649)
                     /locus_tag="VEV83_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK44711.1"
                     /translation="MSEAKGEMDDLSKAVRIQIPITEEMEHSTPLYLTSSFRFSEAEE
                     MRAAFADENDENIYSRFSNPNVDEFVNKMCALENAEAGFATATGMAAVFASMFALLKQ
                     GDHLICCSSVFGSTHTMVTKYLPKYGIETTLVPANDNEAWENAVRPNTKMVYLETPTN
                     PQLEIIDLEWAGEFSRKHNLILNVDNCFATPLLQKPVEYGADLILHSATKWIDGQGRV
                     LGGVIVGKPDLVKEIYLFCRNTGPSLSPFNAWLLSKSLETLDVRMQRHCENAVKVAEA
                     LRHHKSVQSVKYPFSEDHPQYAIAKKQMKAGGGIVCFEVKGGIESGRKFLDKLKMLSM
                     TANLGDTRSIASHPASTTHSKLTEEERLAVGITPGLIRISVGLEFADDIIKDLNQALD
                     D"
     gene            complement(1681..2109)
                     /locus_tag="VEV83_06075"
     CDS             complement(1681..2109)
                     /locus_tag="VEV83_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYK44712.1"
                     /translation="MIQIELNRVHGDYGFEVTDMHGHAVHIDNSPEHGGDNFGVRPMQ
                     MLLMGLAGCSGMDVISILKKQQQDVKGYKTIVRGVREHGVHPSVWKDIEMEFVITGDV
                     DEAKAKRAIELSVHKYCSVAATLMRAGGTIKWDLIINKDE"
     gene            complement(2114..3016)
                     /locus_tag="VEV83_06080"
     CDS             complement(2114..3016)
                     /locus_tag="VEV83_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HYK44713.1"
                     /translation="MALIILGFIVVLTGAYLSRNQSIRRFANPIRIVGLIIILLGILT
                     ACVVQINAGEIGVQKLFGKIQDNVLHSGLHFINPLVTVQEIDIKTQNYTMSGMHDEGQ
                     RTGDDAIRVLTADGLEVTIDLSVLYRVIPDEAPKLLQQTGSDYEDKIVRPVSRTRIRD
                     NAVYYDAISLYSTKRDEFQQRIYKSIEKDFNSRGLRLENLLVRNITLPESVKQTIEQK
                     INAEQDAQKMQFVLQKERQEAERKRIEAQGIADYQRIISESLTDKQLQYETIKAQLEI
                     AKSPNAKIIVMGKGNTPVILDTQK"
     gene            3143..3910
                     /locus_tag="VEV83_06085"
     CDS             3143..3910
                     /locus_tag="VEV83_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYK44714.1"
                     /translation="MKIFVRIFQVIYCVYALLVFVALMIVVFVFIPFLFLFGKIRAGN
                     LVYRVCRVWSTIWYFLIGIRHKEIYESPHDKSRQYIFVANHSSYMDVPSVVMCLHQPL
                     RVLGKYEMVRYPIFGLIYRSAAILVDRSDPEHRAQSLRALRAAIARGISIFIFPEGTF
                     NETGRPLKDFYDGAFRIAAETQTPIKPILFVDCIDRLHWRSIFSLNPGRCRSVFLKEI
                     DVQGYSTTKQDTEKLKAIVYREMEEGLRRYRTYTPQP"
     gene            4279..6804
                     /gene="priA"
                     /locus_tag="VEV83_06090"
     CDS             4279..6804
                     /gene="priA"
                     /locus_tag="VEV83_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HYK44715.1"
                     /translation="MHPSQQPDSNEEAHYSPLGAGGVEDDPSSSPLFAEIIIPLALPQ
                     NYTWSVPAEFQHTAKPGMRVEVQLRNKRYSGIIKKLLSEKPAGFDPRPLLNILDDEPL
                     LFDQQLAFWEWLADYYMCSEGEVMQAAMPANLKLSSETILVWNEEHGEDFSDLNDREY
                     IVAEALTIKKELKLSEVQQLLDASYVYPVIKRLIEKNVCHVWEELREKYKEKNETYIL
                     LHPQYHDEKKLSELFDKSSKAPKQMELLLSYLHLIKTEGEVTQSSLLKKSNANISQLK
                     GLLDKNILLAEKRSINRIHSLPKNVVIDFTFSAAQQAAFDEIQKALNEKQVCLLHGVT
                     SSGKTQLYIKLIEQFIQQGKQVLYMLPEIALTAQIIRRLQKHFGGYIAVYHSKFNANE
                     RVEIWNRVKNGDIKAILGARSALFLPFKELGLIIADEEHDASYKQQDPAPRYHARDAA
                     IYYASLFNAKVLLGTATPSIESYYNVQTKKYALVELKERYGNLDFPSIEIVDLAKVSS
                     KEKVLISPQLKEAIEQALAQKKQVILFKNRRGYTPYLVCNVCGWIPQCRNCDVTLTYH
                     KAKNKMICHYCGTEYPVLYTCPQCGSHDFKQRNFGTEKIEEIVAETFSHAKIARMDYD
                     TMKGKHDHDTLIKLFEQQKIDLLVGTQMIVKGLDFDHVSLVGIIDADSLLYFADFRVN
                     ERAFQLMEQVSGRAGRKNDVGKVLIQVSNTQHPVLQFVKAHDYKALYDFEIESRRNYH
                     YPPFTRLIHVAFRHKENHIAEEAANIFSMALKKDFQGYITGPAQPVVNRIRNQYLWDV
                     LFKLPKNAQTIQQCKLQIDQQTAILKFNKRYRSVDIVPDVDPV"
     gene            complement(6950..9523)
                     /locus_tag="VEV83_06095"
     CDS             complement(6950..9523)
                     /locus_tag="VEV83_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK44716.1"
                     /translation="MTLIKHIFLLLLAASVFPAFSQVDSTPPGETAVSFKVFGVCASL
                     CKPRIEAAAIGKGVKSAAWNVDTKMLGVVYEPAKTSLEKIENRIVEAGHDLENKKAND
                     AVYNALPSCCHYREMESMQDAADMNVHNDSASEHRVTGVVLEEDKTGSFKPLVGASVT
                     WLGTNKGTTTDDNGVFSIPHEADRLIVSYTGFRADTISVMPAKELKIILASGNQLREV
                     KVTTTGASTYISSLDIVRTSVITQKELFKAACCNLSESFETNPSVDVSFNDAVTGSKQ
                     IQLLGLAGIYTQLTVENLPGPRGLATALGLNSIPGTWVESIQLSKGTGSVANGFESIA
                     GQINVELKKPANSEKLYANLYVNDFGKTDLNLNLSQPVGKKWSTALLMHDDFLTNKSL
                     DFNHDGFRDLPTGNLFSAINRWSFDNTKGLMSQFGVKFLNDQRTGGQLDYDASKDKFT
                     TNNYGLEINTKRVEGFGKIGYVFPQKKYKSIGLQLSAFDHKQNSYFGFTSYDAHQQNF
                     YSNLIYQSIIHSTIHKFRTGLSFLYDKYDELFDSTDYHRTEVVPGAFFEYTFTPTTNF
                     DVVAGIREDHNSLYGWFTTPRLNIRYQPVKGTTIRASVGRGQRTANIFAENNGVFASS
                     RAVSIISSTTNGAYGLKPEVAWNKGITVDQKFRLFNRSASFGVDFFRNDFTNQVIVDL
                     EDAREIKFYNLEGKSFSNSFQAELSVTPLQRFDVRLAYRFFDVKSTYNGKLLQKPLTS
                     KNRAFANLAYETNGWKFDYTVSYNGEKRLPSTEVNPPQYQRQDYSPSFVVMNAQVSKT
                     LGKKNPFDIYIGAENLTNYYQQNAIIAADEPFSEYFDASMIWGPVTGRMFYGGVRFKV
                     K"
     gene            complement(9583..9921)
                     /locus_tag="VEV83_06100"
     CDS             complement(9583..9921)
                     /locus_tag="VEV83_06100"
                     /inference="COORDINATES: protein motif:HMM:NF039593.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HYK44717.1"
                     /translation="MKSFIVILIAMFATVTAFSQKAKQNSDTTLHQYVTYSCNMHPQY
                     VSNVPAKCPVCNNNMNLSGKEIMKMQIMKLYTCPMDNMFSVQSGKCPKCGMDLVPFSP
                     KNKPASAGTN"
     gene            complement(9999..10364)
                     /locus_tag="VEV83_06105"
     CDS             complement(9999..10364)
                     /locus_tag="VEV83_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44718.1"
                     /translation="MKKASLIFLLFMYAFSTTGLCLQGFYCCGKLKSVKLTLADYAKD
                     KEGCCKVKYQTFKVTDTHAAADAASVPPVHSSDIQIAPAVSNGIDLVSDVNHHNFYIH
                     APPLRPHNPIYIENCVFRI"
     gene            complement(10443..11501)
                     /locus_tag="VEV83_06110"
     CDS             complement(10443..11501)
                     /locus_tag="VEV83_06110"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HYK44719.1"
                     /translation="MMNKIFFLFFLLASIASCTDQHPATDVVAVIGDGKMPAIAGDVD
                     NNVSVAYGSGDQLMCTYSRDGQTFGSPEIVAELPGLVASATRGPQITATKNGLAIIAV
                     NKDGNIFSYVKDASGEWISTGRVNDIDTTDKEGFIALASDEGNNLFAIWPDLRADHQN
                     KIFGARSNDGGRTWMRNILVYRSPDKTICECCKPSVVMNGRNVFVMFRNWLHGNRDLY
                     LATSSDGGESFGQAQKLGSGNWKLDACPMDGGGLTVNSSGAVSTVWRRQSKIYACEPG
                     QVEKEIGEGKSCSIEDVYGKDIYAWIADGDIVCLLPGGKLQTIGHGSSPVLKKMSEKK
                     AVCVWEDDGKINAAMLTF"
     gene            complement(11545..13005)
                     /locus_tag="VEV83_06115"
     CDS             complement(11545..13005)
                     /locus_tag="VEV83_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44720.1"
                     /translation="MRTLVLILTAIFLLSSTGFANSCEAGDTIPAVDVHHDMSNMNMN
                     DTVPHDHMHHDMNNMQMKDTVSQMHHQMNNMQMNDSGMNMPMGNMTHSFSLNLPMSRN
                     GSGTGWSPDAAPMYGTMYHSKNWMYMLHYNLFIRYNKQDLTNRGSRGDAMVDAPNWLM
                     FMGERKVGENGLFHFGTMFSLDAVITGQRGYPLLFQSGESAHGEPLVDRQHPHDLFSE
                     LSAAYSYALSKKADVFAYVGYPGEPALGPVAFMHRASALYDPDAPISHHWIDATHITF
                     GVATLGVRLGDLKLEGSSFTGREPDENRYDLDKPRFDSWSGRLSFNPSNNWALQVSHG
                     YIKSPEALHPDENINRTTASAEYSVPLKNDREFDVTAVWGMNKQQHHDGENAALLEAS
                     YRLKKVALFGKYEYVEKSSEELALDETIYGDALFPVHAFTLGFNYDLLQFNKTKMAIG
                     SHFTFYRNVERLYDLYGKNPSAFEVYLRIYPASIKM"
     gene            complement(13035..13766)
                     /locus_tag="VEV83_06120"
     CDS             complement(13035..13766)
                     /locus_tag="VEV83_06120"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HYK44721.1"
                     /translation="MKHTYSITGMTCEGCEATVTNSLSAVPGVSNVKTDLAKNEITVE
                     MSKHIATPTLQHALKKYPKYQLEEIAPSFDSPTNDVGKASWLVTYKPILLIFAYIISV
                     TLLVEVRTGFNWMHWMSNFMGGFFLTFSFFKLLDLKGFAENYFSYDIVSKRWFGYGYI
                     YPFIELALGLAYVISFDPLLTNSVTLLIMGISMIGVLKAVFSKRKIKCACLGIVFNLP
                     MSTITIVEDSLMIVMSFISLLSLMS"
     gene            complement(13858..14427)
                     /locus_tag="VEV83_06125"
     CDS             complement(13858..14427)
                     /locus_tag="VEV83_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK44722.1"
                     /translation="MRLYIKNMVCHRCKLAVENELKKVGLTPVQVELGEAVVKEDSFT
                     SQQEQELSGNLQAIGFELLDDKRKKLIEKIKTLIIESIHYDKNPGNKNFSKLISEHLH
                     HDYSYLSKLFSETEGITIEQFIISQKIEKAKELLVYDEMSLSEIAFELNYSSVAHLSA
                     QFKKITGLTPSAFKKSGIHHRYTLDSISH"
     gene            14723..15184
                     /locus_tag="VEV83_06130"
     CDS             14723..15184
                     /locus_tag="VEV83_06130"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYK44723.1"
                     /translation="MKPTAVILFSLLFFSNQLSAQQSHAAYDSILAKKLNADDYGMKQ
                     YVLVLLKKGPADITDKKALDSIFHGHMANIKRLAAENKLVLAGPTGDNDQNYEGIFVF
                     NTGNVEEAKQWLSTDPAIQSKDLDAEVYAWYGTAALQEIPALHEKIQKKSF"
     gene            complement(15693..16145)
                     /gene="dtd"
                     /locus_tag="VEV83_06135"
     CDS             complement(15693..16145)
                     /gene="dtd"
                     /locus_tag="VEV83_06135"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HYK44724.1"
                     /translation="MRAVIQRVSEASVMVNGQITGAIQNGLLVFLGIEDADTADDIQW
                     LSSKIVNLRVFNDGAGIMNLSVKDTDGEILLVSQFTLHALTKKGNRPSYIRASKPDIA
                     IPLYEEMILKLETVLGKKVQTGMFGADMKVKLLNDGPVTIIIDTKNKE"
     gene            16164..16571
                     /gene="arfB"
                     /locus_tag="VEV83_06140"
                     /pseudo
     CDS             16164..16571
                     /gene="arfB"
                     /locus_tag="VEV83_06140"
                     /inference="COORDINATES: protein motif:HMM:NF012684.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
BASE COUNT         4540 a         3758 c         3607 g         4793 t
ORIGIN      
        1 tcatcgaatt cattgaacgc cgctgccata ggcgcatgca atgacgcgat acggaaattc
       61 gaataaatgt gtgcatgaag gagcgtaatg tcactataac caatgatcca tttcgggtta
      121 tcgacaaaac ggtcgaaatt caattcgtct attatcctgc ttaaaccata accgccacgt
      181 gcgcaaaaaa tggctttcac attttcatca tcgagcatct gctgaagatc ttgcaaccgc
      241 tcttcatcag ttcccgaaaa ataatgatac tgattgttca gcgtttttcc tttcttaacc
      301 aggaatcccc attggtgtaa cacattgatg cagcgatcca ttttttcagg aggcatgtag
      361 cccgatgggc atatcattcc aattgcatcg cctggattta aatatggagg aattctgatc
      421 aggagaaatt gtttgtaggt tgggcacgtt tgcctgcgca taattaacta atcatccaat
      481 gcctggttaa ggtctttaat gatatcatcc gcaaattcga gtcctacgga tatacggatc
      541 aaaccgggcg tgatgccaac agccaatctt tcttcttcag taagtttcga atgtgtcgtg
      601 ctggcaggat gagatgcaat gcttcttgtg tcgcccaggt tagcagtcat cgacagcatt
      661 ttcagtttgt ccaaaaattt tctgccgctt tcaattccgc ctttcacttc aaaacaaaca
      721 attcctccgc cggctttcat ttgtttttta gcaatggcat attgcggatg atcttcgctg
      781 aaaggatatt ttaccgattg aacactttta tgatgacgta acgcttcggc aacctttaca
      841 gcgttctcac aatgacgctg catgcgaaca tcgagcgttt ccaggctttt gctcaaaagc
      901 catgcattga atggtgacaa tgatggaccg gtgttgcgac agaataaata aatttctttt
      961 acgaggtccg gcttgccgac aattactccg cctaaaactc ttccctgccc atcgatccat
     1021 tttgtggctg aatgaaggat aaggtcggca ccatactcaa caggcttttg tagcagcggc
     1081 gtagcaaagc aattatctac gttcaaaata agattgtgct ttcttgaaaa ttctcctgcc
     1141 cattcaaggt cgatgatctc cagctgagga ttcgtcggcg tttcgagata aaccattttt
     1201 gtatttggcc gcactgcgtt ttcccaggct tcgttatcgt tcgccggcac aagcgttgtt
     1261 tcgatgccat acttcggcaa atatttcgtt accatcgtat gtgtactgcc aaaaacagag
     1321 ctgcagcata tcaaatgatc tccctgcttc aataatgcga acatcgatgc gaacacggcg
     1381 gccatcccgg ttgcagttgc aaaaccggcc tctgcatttt ccagggcgca cattttgttt
     1441 acaaactcat ctacattcgg gttgctaaag cggctgtaaa tgttttcatc gttttcatca
     1501 gcaaatgcag cacgcatttc ttctgcttcg ctgaaacgaa aactgctggt taagtacaga
     1561 ggtgttgaat gttccatctc ctctgtgatg ggaatttgaa ttcgaaccgc ctttgagaga
     1621 tcgtccatct caccctttgc ttcgctcata tgtgtctctt ttagaatttt cttgcattta
     1681 ttattcatcc ttgtttatga taagatccca ctttatagtt ccgcccgctc tcatgagtgt
     1741 cgccgctacg gaacagtatt tatgtaccga aagctcgatg gcacgttttg cctttgcttc
     1801 gtctacgtcg cccgtgatca caaattccat ctcgatgtct ttccaaacag aagggtgaac
     1861 accgtgctca cgcacaccgc gcactattgt tttataacct ttaacgtctt gctgctgttt
     1921 ttttagtatc gatatcacat ccattccact gcaacccgcg aggcccatta acagcatttg
     1981 catgggccga acgccgaaat tgtcgccgcc gtgttcagga ctattatcga tatgaacggc
     2041 gtggccatgc atatctgtta cttcaaaacc ataatcgcca tgaacacggt tcaattctat
     2101 ttgtatcatg aaattatttt tgtgtgtcga gaataaccgg cgtattgcct ttgcccatca
     2161 caatgatctt tgcatttggt gattttgcaa tttcaagctg cgccttgatc gtttcgtact
     2221 gaagctgctt atccgttaag ctttcgctga tgatgcgctg gtaatctgca ataccctgcg
     2281 cctctattct tttccgttca gcttcctgtc tttctttttg caaaacgaat tgcatctttt
     2341 gtgcatcctg ttctgcattt atcttttgct cgatcgtttg ttttacgctt tccggcaaag
     2401 taatgttgcg aaccagtaaa ttttcgagcc gtaatccgcg tgaattgaaa tccttttcta
     2461 tgcttttgta aatgcgttgc tgaaattcgt cgcgcttggt tgaatacaga gatatcgcat
     2521 cgtaatagac cgcattgtcc cttatcctcg ttcgggatac cggccgcacg atcttgtctt
     2581 catagtcgct gccagtttgc tgaagcagtt tcggggcttc atcagggatc acgcggtaca
     2641 aaacagaaag atctatggtt acttccaaac catcggccgt taatacgcgt attgcatcgt
     2701 ctccggtcct ctgcccttca tcgtgcatgc cgctcatggt ataattttgc gttttaatat
     2761 ctatttcctg cacagtgaca agcgggttaa taaaatgcag gccgctgtgc aatacattat
     2821 cctggatctt gccaaacagt ttttgtacgc cgatctctcc ggcatttatt tgcacaacgc
     2881 atgccgtaag aatccccagc agtattatta ttaacccaac gatgcgtata ggatttgcaa
     2941 aacgtcgtat gctttggttg cggctcaggt aagcaccggt aagaacaacg atgaacccaa
     3001 gaatgatcag cgccataaaa tatttattag cccgcaaaat tatatgcttc cgcaattcag
     3061 gcggttctta ttatataagc cagcctgcct ggtgaaaaga cgacgcaaaa cccattcaaa
     3121 taatttgttc tattttgaaa ccgtgaaaat cttcgttcga atcttccagg tcatctattg
     3181 tgtttatgct ttgctggtct tcgttgcgct gatgatagtc gtgttcgtat ttatcccttt
     3241 tctttttctt tttggcaaaa taagagcggg taacctggtg tacagggtct gccgggtttg
     3301 gtcgacaata tggtattttc tcattggtat caggcacaaa gagatctatg aatcgccgca
     3361 cgacaaaagc aggcaatata ttttcgtcgc gaatcattct tcttatatgg acgttccaag
     3421 cgtggttatg tgcctccacc aaccattgcg cgtattgggc aagtacgaaa tggtgcgata
     3481 tcccatcttt ggattgatat accggtccgc cgccatactt gtagacagaa gtgaccccga
     3541 gcatcgtgcg caaagcttac gcgcattgag agcagcgatt gcaagaggca tttcgatttt
     3601 tatttttccg gaggggacgt tcaatgaaac cgggaggccg ctgaaagatt tttacgatgg
     3661 tgcttttcga attgctgctg aaacgcaaac gcccatcaaa cctattttat ttgtcgattg
     3721 tattgaccgg ttacattggc ggagtatttt ttcgctcaat ccaggacgat gccgttctgt
     3781 ttttctcaaa gaaatagatg tgcaaggcta ctctactacg aagcaggata cggaaaaatt
     3841 aaaagcaata gtgtatcggg aaatggagga agggttaaga aggtacagaa cgtatacgcc
     3901 ccagccctaa aggcagaaga gagatgggtg tcaaccacgg ccctgaaggg agcggaggcg
     3961 gcagcgacgc tgcatgctac gcacaacgca gctcttcgct aacgtcattc ccgcgaaagc
     4021 gggaatctca tccttgtaag gaccgcgata aggcaggtaa tttatctttt gtctagtgtg
     4081 taccgtctcc aatagaaaag attgttctga ggcttctgag aatgagatgc ccggtcgcag
     4141 ccgggcatga cgttcaatca gcttgcgcgt gtgagctgtt ggattttgtc cattcctaaa
     4201 aatggtttgt gcaccgcgtg gatagatgtc ggctcaattt atacaattta aattttattt
     4261 tagtcgcccg attacaacat gcatccatca caacaacccg attcaaacga agaagcacat
     4321 tactcccctt taggggctgg gggcgttgag gatgaccctt cgtcttcgcc tctctttgcc
     4381 gagatcatca ttcccctcgc tcttcctcaa aattatacat ggagtgttcc agcggaattt
     4441 cagcatactg caaaaccggg catgcgtgtt gaagtgcagc tgagaaataa gagatattca
     4501 ggtatcatta aaaaactgtt gtctgaaaaa cctgcgggct ttgacccaag gcctttatta
     4561 aatattttgg acgatgaacc acttctgttc gatcaacaat tagcgttttg ggagtggctt
     4621 gcggattatt atatgtgtag cgaaggtgaa gtgatgcagg ctgcgatgcc agcgaatctt
     4681 aaactgtcga gtgaaacgat acttgtttgg aacgaagaac acggtgaaga tttcagcgat
     4741 ctgaatgacc gggaatatat cgttgcggaa gctttgacca taaagaaaga acttaaattg
     4801 agcgaggtgc agcaactgct ggatgcatct tacgtgtacc ctgtgataaa aaggctgatc
     4861 gaaaaaaatg tttgtcatgt ttgggaggag ctcagggaaa aatacaaaga aaaaaacgag
     4921 acgtacatcc tgctgcatcc gcaatatcac gacgagaaaa aactttcaga actgtttgat
     4981 aaatcctcaa aagcacccaa acaaatggag ctactgctgt catatctcca tttaattaaa
     5041 acggaaggag aggtaacaca atcatcgctg ctgaaaaaat caaatgcaaa tatttcgcag
     5101 ctgaaaggcc tgctcgataa gaacattctt ctcgcagaaa aacgatcgat caaccgcatc
     5161 cactcgctgc ctaagaacgt tgtgatcgat ttcacttttt ccgctgcaca gcaggctgct
     5221 tttgacgaaa ttcagaaagc actgaatgaa aaacaagttt gcctgttgca tggtgtaaca
     5281 tccagcggga aaacgcaact ctatattaaa ctcatcgaac aattcatcca gcaagggaaa
     5341 caggttttat acatgttgcc tgagatcgcg ctgacggcac agatcatccg acgcctgcaa
     5401 aaacattttg gcggttacat cgctgtctat cattcaaagt tcaatgcaaa cgaacgggtg
     5461 gaaatatgga accgcgtaaa gaatggtgac attaaggcga tccttggtgc acgatcggcc
     5521 ttgttcctgc cttttaaaga attaggattg atcatcgcgg atgaggagca tgatgcttct
     5581 tacaaacagc aggatcctgc gccgcgttac catgcaagag atgcagcgat atactatgcc
     5641 tcgctgttta acgccaaagt tttgttggga actgccacgc cttcgatcga atcatattat
     5701 aatgtgcaaa caaaaaaata tgcgctcgtc gaattaaaag agcgatacgg caatcttgat
     5761 tttccttcga tagaaattgt cgacctggca aaggtgtcat cgaaagaaaa agtattgata
     5821 tcgccgcaac taaaagaggc gatcgaacag gcgcttgccc aaaaaaagca agtaattctt
     5881 ttcaagaacc ggcgtggtta cacaccgtat ctcgtgtgta acgtatgcgg atggatccct
     5941 cagtgccgga actgcgatgt tacgctgacg tatcataagg caaagaataa aatgatctgt
     6001 cactattgcg gcactgaata cccggtatta tacacgtgcc cgcaatgcgg cagccatgat
     6061 tttaaacaac ggaattttgg tacggagaag atcgaagaaa tcgttgcgga aactttcagc
     6121 catgcaaaaa ttgcacggat ggattacgac acgatgaagg gaaagcatga tcatgatacg
     6181 ctaataaaat tgttcgaaca gcaaaaaata gatttactcg tcggcacgca gatgatagtg
     6241 aagggccttg attttgacca cgtcagcctg gtcggtatca tcgatgcgga cagcctgctg
     6301 tactttgctg attttcgcgt taatgaacgg gcattccagt taatggagca ggtgagcgga
     6361 agggccggcc ggaaaaacga tgtgggaaaa gtgcttatcc aggtgagcaa cacacaacat
     6421 cccgttctgc aatttgtaaa agcgcacgac tacaaggcgc tctacgattt tgaaattgaa
     6481 agccggcgta attatcatta tcctccgttc acgcgtctca tccacgttgc gttccggcat
     6541 aaggaaaatc atatcgccga agaagctgca aatatttttt caatggcttt gaagaaagat
     6601 ttccaaggct acatcacagg gcctgcgcaa cctgttgtaa atcgcattcg caaccagtat
     6661 ttatgggatg tgcttttcaa acttccgaaa aatgcgcaga cgatacagca atgtaaactg
     6721 cagatcgacc aacaaacagc gatattaaaa tttaataaac gttatcgttc cgtagatatc
     6781 gttcccgatg tggacccggt gtagttgaga gttaccagtt accggttgcc ggtcactggt
     6841 ggccggtaac cggtggtctt ttaaccggac tgaccggata aactggtgac cggaaactgg
     6901 caaccggaaa ctggcaaccg gcaacttcta acctgcgatc tgcaacccgc tacttcacct
     6961 taaacctcac ccctccataa aacattcttc ccgtgaccgg tccccagatc attgaggcat
     7021 caaaatattc gctgaaaggt tcatctgcag caatgatcgc attctgctgg taatagtttg
     7081 taagattttc agcgccgata taaatatcaa aaggattttt cttacccaat gtcttgctca
     7141 cctgtgcatt catcacaaca aacgaaggtg aatagtcttg ccgttggtat tgtggcggat
     7201 tgacttctgt tgatggcaat cttttttcgc cattataact tactgtgtaa tcaaatttcc
     7261 aaccgtttgt ctcgtaggct aagttggcaa atgcacggtt ctttgatgta agcggttttt
     7321 gcaaaagctt tccattatac gttgacttca catcgaaaaa gcgataagcc aatcgaacgt
     7381 caaatctttg gagaggcgtg acagataatt cagcctggaa actgttcgaa aacgattttc
     7441 cctcgaggtt atagaatttt atttcccttg catcttcaag gtcaacaata acctggttgg
     7501 taaaatcatt cctgaaaaaa tccacgccga aagaagcact gcggttgaat aatctgaatt
     7561 tctggtcaac agtgattcct ttgttccatg caacttccgg tttcaatccg taggccccat
     7621 ttgttgtcga cgaaattata ctcactgccc gcgaactagc gaatacgcca ttattctcag
     7681 caaaaatatt tgccgtccgt tggcctctgc caacactcgc cctgatcgtc gttcccttaa
     7741 caggctgata cctgatgttt aaacgcgggg ttgtaaacca accgtataaa ctattgtgat
     7801 cttcacgaat gccagcgacg acgtcaaagt tagttgtggg tgtaaatgta tattcaaaga
     7861 aagcgccggg caccacttcc gtgcgatgat aatcggtgct gtcgaacaat tcatcatatt
     7921 tatcatacaa aaaactaagg ccggtcctga atttatgaat ggtcgaatga ataatggatt
     7981 gataaatgag gttggaataa aaattctgct ggtgcgcatc gtaacttgta aagccgaaat
     8041 aagaattttg tttgtgatca aaagccgata gttgcaagcc aatgctcttg tatttttttt
     8101 gcgggaagac gtagccgatc ttgccaaatc cctcgacgcg ttttgtattt atctccaaac
     8161 cgtaattatt ggttgtgaac ttgtcttttg atgcgtcgta atccaactgg ccaccagttc
     8221 tttgatcgtt caaaaattta acgccaaatt gcgacatcag gccttttgta ttgtcaaagc
     8281 tccacctgtt aatggcgctg aataaatttc ctgttggaag gtctctgaac ccatcatgat
     8341 taaaatccaa acttttattc gtcagaaaat catcgtgcat gagcaaagct gttgaccatt
     8401 tctttccaac aggctgcgac aaattgaggt tgagatctgt cttgccaaaa tcattcacat
     8461 agagattcgc ataaagcttc tcgctgtttg cgggtttttt gagttccaca tttatttgtc
     8521 ctgcgatgct ttcaaaacca tttgccaccg aaccggtccc tttgctcaat tggatacttt
     8581 ccacccaggt acccggaata gaatttaatc ccagcgctgt cgccagccct ctcggtcccg
     8641 gcaaattctc tactgttaac tgcgtataaa ttccggcgag gcctaacaat tgtatttgct
     8701 ttgaaccggt aaccgcatcg ttgaacgaga cgtcaaccga aggatttgtt tcgaaacttt
     8761 cgctcaggtt gcagcatgcc gctttaaata actctttttg tgtgatcact gaagtgcgga
     8821 caatatcaag cgagctaata taagttgatg cgccggttgt ggtgacttta acttctctca
     8881 gttgattccc acttgccaaa attattttta gctctttcgc gggcataaca gagatcgtat
     8941 ctgcgcgaaa tccggtgtaa cttacgatca gcctgtctgc ttcatgaggg atggagaata
     9001 cgccgttgtc atcggttgtt gttcctttgt ttgttccaag ccaggtgacg ctcgcgccga
     9061 cgagtggttt aaacgagcct gtcttatctt cttccaggac cacacccgtg acccggtgct
     9121 cacttgccga atcattgtgc acattcatat ctgctgcatc ctgcatgctt tccatttcgc
     9181 gataatggca gcatgaaggc aaggcgttgt atactgcatc attggccttt ttgttttcaa
     9241 gatcatgccc tgcttcgacg atgcgatttt caattttttc gagcgatgtt tttgctggct
     9301 cgtacaccac gcccagcatc ttcgtatcta cattccatgc tgccgatttc acgccctttc
     9361 caattgccgc tgcttcgatg cgcggcttac agaggctggc gcatacgcca aataccttaa
     9421 atgaaacggc tgtttcgcct ggaggagtcg agtccacctg cgaaaaagct ggaaatactg
     9481 aagcagcgag gagcagaaga aatatatgtt tgatcaatgt catcttaggg agattgttgc
     9541 ataagcaccg gaaggatcaa ctcccggtgc ttatcacttt agttaattag tacctgcgct
     9601 cgctggtttg tttttcggac tgaatggtac caggtccatc ccgcatttag gacattttcc
     9661 tgattgcacg gagaacatgt tgtccatcgg acaagtgtac agtttcatga tctgcatttt
     9721 cataatttct ttccccgaaa ggttcatgtt gttgttacac accgggcatt ttgcaggaac
     9781 attgctgaca tattgaggat gcatattgca gctatatgtt acatactgat gcagggtggt
     9841 atcagaattt tgtttcgctt tttgagaaaa agctgtgact gttgcgaaca tcgcaatcag
     9901 tatcactata aaagatttca ttgtatttga ttttatgttt gagaaataag gaacagctgg
     9961 taagaatatt taccagcttg aatactcaaa acataagatc aaattctgaa aacacaattc
    10021 tctatataga tgggattatg tggtcgtagt ggaggcgcgt ggatatagaa gttgtgatgg
    10081 tttacatcac ttaccaggtc aattccattt gatactgcag gagcgatttg aatgtcgctg
    10141 ctatgaacag gcgggacgct tgcagcatcg gctgcagcat gtgtatcggt taccttaaaa
    10201 gtttggtact ttactttaca acaaccttcc ttatcttttg cgtaatcggc gagagtaagt
    10261 tttaccgatt tcaattttcc gcaacaataa aagccctgca ggcacaaacc tgttgttgag
    10321 aacgcataca tgaagagcag gaatatgaga gaggcttttt tcattcgttg caaaactaat
    10381 aaactttcta gcgaaaaaac atgacggtgg ttatagattc gggtgagtaa aattagcatg
    10441 ccttagaacg taagcatcgc cgcattgatt ttcccatcat cttcccaaac gcaaacagct
    10501 tttttttcgc tcatcttttt taataccgga gagctgccat gaccaatcgt ctgaagtttg
    10561 ccaccaggca acaggcagac aatgtcacca tcagcgatcc atgcataaat gtcttttcca
    10621 taaacgtcct ctatgctgca actttttcct tcgccaattt ctttttccac ctgccctggc
    10681 tcacaggcgt atattttcga ttgtctgcgc catacggtac taacagcacc ggaggaatta
    10741 acggtgaggc caccgccgtc cattgggcag gcgtccagct tccagtttcc actacctaac
    10801 ttttgtgcct gtccaaaact ttctcctcca tccgaagatg ttgcgagata taaatcacga
    10861 tttccgtgca gccagtttct gaacataaca aaaacgtttc taccattcat aaccaccgac
    10921 ggcttgcagc attcgcatat cgttttatcc ggcgaccgat acactaaaat gtttctcatc
    10981 catgttctgc caccatcatt cgacctggca ccaaatattt tattctgatg atcggcgcgc
    11041 aggtcaggcc agatcgcaaa cagattattg ccctcatcgc tggctagcgc aataaatcct
    11101 tctttgtctg tcgtatcaat gtcgttcact cgcccggttg aaatccactc accggaggca
    11161 tctttaacat acgagaaaat gttgccgtct ttgttcactg caatgatcgc aagaccattt
    11221 ttcgttgctg taatttgagg ccctctcgtt gcggatgcga cgaggcctgg caactccgca
    11281 actatttccg gagaaccaaa agtttgccca tcccgggaat aagtacacat tagttgatcg
    11341 cctgacccat atgccacgct gacgttatta tccacgtcgc ctgcaatcgc cggcatttta
    11401 ccatcgccaa taaccgccac cacgtcagtt gccggatgtt gatctgtgca gcttgcgatc
    11461 gaagcgagca agaaaaacaa aaagaaaatt ttattcatca tgcaaaaaaa attttacgga
    11521 gcgcgttaca tgctagctat tgttttacat tttgatcgaa gcaggataga tgcgaaggta
    11581 cacctcgaac gcagaaggat tttttccgta gaggtcataa agtctttcga cattccgata
    11641 gaaagtaaaa tggctgccga tcgccatttt cgttttattg aactgaagta agtcgtaatt
    11701 gaatccaagt gtaaacgcat gcacaggaaa tagagcgtcg ccgtaaattg tttcgtcaag
    11761 tgctagttct tctgaagatt tttcaacgta ctcgtattta ccaaacagcg cgactttttt
    11821 gagacggtaa gaggcttcaa gcaatgcggc attttctccg tcgtgatgct gttgcttatt
    11881 cattccccaa acagcggtga catcgaactc acgatcgttt ttaagaggca cactgtattc
    11941 ggcggatgct gttgttcggt ttatgttctc gtccggatgc aacgcttccg ggcttttaat
    12001 ataaccatgc gaaacctgga gcgcccagtt gtttgaagga ttaaaagata atcttccgct
    12061 ccacgaatcg aaacggggct tgtcaagatc atacctgttt tcatccggct cacgacctgt
    12121 aaaagaagaa ccctcaagtt taagatctcc taaacgcaca cccaacgttg ccactccgaa
    12181 cgtgatgtgc gttgcatcga tccagtgatg tgaaatagga gcgtcgggat catacaacgc
    12241 agatgcgcgg tgcatgaatg caaccggtcc gagtgcaggt tcgcccgggt atccgacata
    12301 cgcaaacaca tccgcttttt tcgataatgc atatgaatat gccgctgaca attcggaaaa
    12361 aagatcgtgc ggatgctgac ggtctacaag cggttcgccg tgcgctgatt ctccagattg
    12421 aaacaacagc ggatatccgc gttgacccgt tatcacagcg tcgagcgaga acatcgttcc
    12481 gaaatgaaat aatccattct ccccaacttt tcgctcgccc ataaacatga gccagttcgg
    12541 cgcgtcgacc atcgcatcac cgcggcttcc tctattcgtc agatcctgct tattgtacct
    12601 gatgaataaa ttataatgca gcatgtacat ccagttcttc gaatggtaca tcgttccata
    12661 catcggcgct gcatccggcg accagcctgt gcccgaaccg ttgcggctca ttggaagatt
    12721 cagcgaaaat gaatgagtca tatttcccat gggcatgttc atgcctgaat cattcatctg
    12781 catattattc atctggtggt gcatctggga gacagtatcc ttcatctgca tgttattcat
    12841 gtcgtgatgc atgtgatcgt gcggcaccgt gtcgttcatg ttcatgttgc tcatgtcatg
    12901 atgcacatca acggcaggga tggtgtcgcc ggcttcacaa gagtttgcga acccggtgga
    12961 acttagcagg aaaatagccg ttaatatcaa gacgagggtc ctcatttgca agttgcttca
    13021 aatagtatgc tatgttacga catcaaactt aagaggctga taaaactcat tacgatcatc
    13081 agtgaatcct caacaattgt gatcgtactc attggcaaat taaaaactat accaaggcac
    13141 gcgcatttaa ttttcctttt actgaaaacg gctttcagca cgccgatcat acttatgccc
    13201 atgataagta atgtcaccga attggtaagc agaggatcga atgaaattac gtaagcaagc
    13261 ccaagcgcca gttcaataaa cgggtagatg tatccataac caaaccatct ttttgagacg
    13321 atgtcgtacg aaaaataatt ttcggcaaag cctttcagat caagcagctt gaagaatgaa
    13381 aacgtcagaa aaaatccacc cataaaatta ctcatccagt gcatccagtt aaaacctgtg
    13441 cgaacctcca ccaacaacgt tacgcttatg atgtacgcga aaatcagaag gatcggtttg
    13501 taggtgacaa gccagctcgc tttgccaacg tcattcgttg gcgagtcgaa agatggggct
    13561 atttcttcga gctggtactt cggatatttt ttcaaggcgt gttgcaatgt tggcgtcgcg
    13621 atgtgtttgc tcatttcaac agttatctca tttttcgcga ggtctgtctt tacgttagac
    13681 acgccaggca cagccgacaa tgaatttgta actgttgcct cgcagccctc gcacgtcatt
    13741 cccgttattg aatatgtatg tttcataatt atatctttca caaagctccc ttcaaccgag
    13801 gcggaaagtg ttatgcaatt atggaattct tttatacaat tatgggctgc gggctgatta
    13861 atgggaaatt gaatcgagcg tgtagcggtg atgaataccg ctctttttga atgctgaagg
    13921 agtaaggccg gttatttttt tgaattgagc cgagagatgc gcgacgctgc tataattgag
    13981 ctcaaaagcg atctcgctga gactcatttc atcatagacc agcagttctt tggccttttc
    14041 gattttctgg ctgatgataa actgttcgat cgtgatccct tcggtttctg aaaataattt
    14101 gcttaagtaa gaataatcat gatggagatg ttcggaaatg agtttgctaa aatttttatt
    14161 gcccggattt ttatcgtaat gaatagattc aatgatcagc gtctttattt tttcaatgag
    14221 cttttttctt ttgtcatcga gcaattcaaa accgattgcc tggaggttgc ctgataattc
    14281 ttgttcctgt tggctggtaa agctgtcttc tttcaccact gcttctccca gctcaacctg
    14341 taccggtgtc aggccgactt ttttcaattc gttttcaacg gccagtttgc agcgatgaca
    14401 aaccatattt tttatgtata accgcatccg gcaaaagtaa atcagcgtgt gtgaagattt
    14461 aattcaataa aaaattgact gcggcaaaat tttgtaaaat attttttgaa ttgaaagaat
    14521 ttttgcggtt tgattttgca actgaaccac aaaacgtgta agaacacaat atccaggctc
    14581 agggatttat gatgcacagc tttgacgttt aaatgtgttg ttcaaataat atgtaggcgc
    14641 gaaccgtcag aataaaataa tttgcttttt ttacatgtgc tttccccaag accacattgg
    14701 aaaaaaatta aacatttcat ttatgaaacc aactgcagtt attttattta gcctcctgtt
    14761 tttctctaat caattatccg cacagcaatc acatgccgcg tacgattcta tcctcgccaa
    14821 aaaactaaac gctgatgatt atggtatgaa gcaatacgta ttggttttat taaaaaaagg
    14881 acctgcagac atcaccgaca aaaaagccct cgacagtatt tttcatggtc acatggcaaa
    14941 tatcaaaagg ttggctgcgg aaaataaact ggtgcttgcc ggcccaaccg gcgataacga
    15001 ccaaaattat gaagggatct ttgtcttcaa cacgggcaac gtagaagagg cgaaacaatg
    15061 gctcagcaca gatccggcta ttcagtcaaa agaccttgat gcggaagttt atgcctggta
    15121 tggaacagcc gctttacagg agatccccgc gctacatgaa aaaattcaaa agaaaagttt
    15181 ctaggcctga ctaattttca cgtgttggtc tattaacgtt gagtcgcaat gattgccaat
    15241 cttgcagtaa acagtatcga agtttgatga acgagaccgc acgtctttcc cgcgaaggcg
    15301 ggaatctgct aactttagtt tatgcaatat gagccacagt ttatgcctta acaaatgtgc
    15361 atcatgaagt cttgtacagt ggcgtgactt ctgacgtttt tacatattac cgaggtttat
    15421 cgaaattcac tcacgcaaaa tataattgca gcaagcgtat ttatgcaact gctagagaaa
    15481 aacaactgaa aaaatggatc gatcatcgaa gaataaattg atttcggatt tcaatcccga
    15541 gtggcaggat ttattcattg accttaaaat tacttgcagc aaatgcccgg tcgagccggg
    15601 catgacggcg acgtggttgc gatgtgttct ggcagcaaac taaagcaaac aggatttctg
    15661 taagtccatt ttaatagcac aacgcgctaa ttttattctt tgttctttgt atcaataatt
    15721 attgtaaccg gcccgtcgtt caggagtttt actttcatat cggcaccgaa catgcctgtt
    15781 tgcacttttt taccgagcac ggtttccagc ttcagtatca tttcttcata taatggtatc
    15841 gcgatgtctg gtttgcttgc ccgtatatag gaaggacgat ttcctttttt tgtcagcgca
    15901 tgcagcgtga actggctcac caggagtatc tcgccgtcag tgtctttcac gcttaagttc
    15961 ataatgccgg caccgtcatt aaaaactctc aggttaacga tcttactgct aagccattga
    16021 atgtcgtctg cggtatcggc gtcctcaatt ccgagaaaga ctaacaggcc attttgtatt
    16081 gcgcctgtaa tttgtccgtt caccatcacc gacgcttcag acacacgttg gatcactgcc
    16141 cgcattcgga ttaattttac cggatgaaga tagagattac accggagatc agttttcaaa
    16201 cggcacgaag tggtggcaaa ggcgggcaga acgtgaacaa ggtggagaca atggtagagg
    16261 gccggtggct tgttgatgat tcgcaactga tcaatggagc ccaaaaggaa cttattaaga
    16321 aacatcttgc gaatcgcata acgtccgatg gatatctttt ggtgaaatct caaaccgaac
    16381 ggtcacaact tggcaacaag ggccaggtga tttcaaaaat gaatgacctg gtgaacaaag
    16441 cgctgcaacc aaaaaaacct cgcattgttg taaaagttcc taaggtgata aaagaaaagc
    16501 ggctggagaa gaagaagcaa aaatcagcta ttaaacaagg aagaaaaaaa ttaaggccgg
    16561 gggaatatta acttgttgcc agttgccggt taccagtctc cggtaactgg taacagtctc
    16621 atacctattt ttgcgaaaat tttttagttg agcagcataa agcaactggc aggacaaaca
    16681 ttttggtatg gattaagc
//
LOCUS       DASQJI010000206         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_173214,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000206 DASQJI010000000
VERSION     DASQJI010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173214"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..>1538
                     /gene="eat"
                     /locus_tag="VEV83_06145"
     CDS             198..>1538
                     /gene="eat"
                     /locus_tag="VEV83_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine permease"
                     /protein_id="HYK44725.1"
                     /translation="MTFLFKIFTNKYFFLSALNQLKRTLTPLMLWGLGVGYVISGMYF
                     GWNLGLQQGGTLGLAIATFFIIIMYVTFTYSYAELACAIPKAGGAFDYAKRALGDDLG
                     FIAGIAQNIEFIFAPPAIAFAIGAYFNLFFPQIPILVIAIFSYILFTALNIYGVKAAA
                     LFELVITILAVAELLIFSGITLPHVQLNNLQHNAFPNGWPGVFAAIPFAIWFFLAIEG
                     VANVAEEAINPQRTIVFGFGSAMITLVILCILVFVSSVGVAGWEAVVYKSDGSTSDSP
                     LPLALGQIVGNDHVLYHLLIMIGLFGLIASFHGIILAAGRSSFELGRVNFAPKFIGKI
                     HRKFQTPSNALLVNMAVGIIALLTGRTSEIITISVFGALTLYIVSMISLLRLRKKEPG
                     MERPFKVPAYPAFPLIALIIAVISFVAMTIYILKLALIYFLLVGICYGCFKLFKT"
BASE COUNT          370 a          342 c          343 g          483 t
ORIGIN      
        1 atcatacttt tatcaaaccc catgcggctg ctgtttccgc cgcatactac gaggccatat
       61 aattttgttt tgaccggcaa gctggtgatc attataccat caaagttact actgaattta
      121 ttcaggcatc aacgaaagaa ccaaggaagt atgaggatca agcccgttat gtgcgtcttg
      181 catagcaata gtttgcaatg actttcttat ttaagatatt tacaaataaa tattttttct
      241 tgtccgcttt aaatcaactg aaacgaacac tcactccatt gatgctttgg gggcttggcg
      301 ttggttacgt gatctcgggc atgtacttcg gctggaatct cggtctgcag caaggtggaa
      361 cattaggcct cgcgatcgct acattcttca taatcatcat gtatgtcaca ttcacgtata
      421 gctacgcgga gctcgcctgt gcgataccga aggccggcgg agcttttgac tatgccaagc
      481 gtgcgcttgg agatgacctg ggatttattg cgggcatcgc gcaaaatatt gaattcatct
      541 tcgcgccgcc cgcgatcgca tttgccatcg gggcttactt caatttgttt tttccccaaa
      601 tcccgatcct cgttattgcg atcttcagtt atattctttt tactgcatta aatatttatg
      661 gtgtgaaagc agccgcgtta tttgagctgg tcatcaccat tcttgccgtt gccgaattat
      721 tgatcttttc gggtatcaca cttcctcatg tgcaattaaa caatcttcag cataacgcct
      781 ttccaaatgg atggccgggc gtatttgctg cgatcccttt tgctatatgg ttttttctcg
      841 ccatagaagg cgttgcaaat gtggcggagg aagcgatcaa tccccaaaga acgatcgtat
      901 ttggttttgg ctccgctatg atcaccctgg tgatcctgtg tatcctcgtt tttgtaagtt
      961 cagttggtgt tgcaggctgg gaagcggttg tgtacaaatc cgacggctca acgtcagact
     1021 cgccacttcc cctcgcgtta gggcagatcg taggaaatga tcatgtgctc tatcatttgt
     1081 tgatcatgat agggttattt ggattgatcg catcatttca cgggatcata ctcgccgcgg
     1141 gcagatcaag cttcgaactt ggacgagtaa attttgcgcc gaaatttatt ggaaagatcc
     1201 atcgcaaatt tcaaacacct tccaatgcgt tgctcgtgaa tatggctgtc ggtatcatcg
     1261 ccttgttgac gggcagaacg tctgaaataa ttacgatctc cgtattcggt gcactcacat
     1321 tatatattgt gtcaatgatc tcgttgttgc gactgagaaa aaaagaacca ggaatggaaa
     1381 ggccattcaa ggtgccagct tacccggcat ttccccttat cgcgttgatc attgctgtga
     1441 tctcatttgt ggctatgacg atctatattc tgaaactagc gctgatatat tttttgctgg
     1501 taggaatatg ttatggctgc ttcaaattat ttaaaaca
//
LOCUS       DASQJI010000207         1905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2323101,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000207 DASQJI010000000
VERSION     DASQJI010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323101"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VEV83_06150"
     CDS             complement(<1..1070)
                     /locus_tag="VEV83_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HYK44726.1"
                     /translation="MPSADSTANSSDSQTSGLPDSPSHRLPDSPSSGLSDSPPTPKQL
                     GYYFPAEFAKHEATWLSWPHKEASWPGKIHTIYPSYAKFVKELTEGETVRINVNDEVM
                     KAFAEDVLSKNDVNMSRVQFFLNPTNDAWCRDHGPAFLINPHAKQKKVIVDWNYNAWG
                     DKYPPYDLDDVIPTLIANHFDIPVFHPGIIMEGGSVEFNGEGTLITSTACLLNENRNP
                     HLSKQQIEYYLSEYYGVDQILWIDEGIVGDDTDGHIDDTVRFVNADTVIAVIEDDKND
                     DNYHLLQSNLKQLKELRLLNGKQLNIVELPMPDCISYEEQRLPGSYANFYIANNAVIV
                     PTFQCSKDERALQIIQDCFPER"
     gene            complement(1245..>1905)
                     /locus_tag="VEV83_06155"
     CDS             complement(1245..>1905)
                     /locus_tag="VEV83_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HYK44727.1"
                     /translation="ETLSTLAAELNIVIVASLFEKRTKGIYHNTTVVIDADGTLLGKY
                     RKMHIPDDPAYYEKFYFTPGDLGYKVFKTKYATIGVLICWDQWYPEAARITSLMGAEI
                     LFYPTAIGWATSQDEATNNEQYEAWQTIQRSHAVANGVHVVSVNRTGFEQNGNMKFWG
                     GSFIANPFGRLLYKASHDNEEVFLAELDLEKTDQYRTHWPFLRDRRIDSYEPIVKRFI
                     D"
BASE COUNT          493 a          432 c          414 g          566 t
ORIGIN      
        1 tttcgctcgg gaaaacagtc ctggatgatt tgtaatgctc tttcgtcctt gctgcactga
       61 aaagttggta cgatgaccgc attgttggca atataaaaat ttgcgtaaga tcccggcagg
      121 cgctgctcct cgtaagaaat acaatcaggc atgggtagtt caacaatgtt tagctgtttt
      181 ccattcagca gtctcagttc ttttaattgc tttagattgc tttgaagcag atggtaatta
      241 tcatcgttct tgtcatcttc tataacagca attacagtat ccgcatttac aaaacggacc
      301 gtgtcatcaa tatggccgtc ggtatcatcc cctacaattc cctcatcgat ccacagtatt
      361 tgatcgacgc cataatattc gctcaaataa tattcgatct gctgcttgct caaatgcggg
      421 tttcgatttt cgttgagcaa gcacgcggtg gaggtgataa gcgttccttc gccgttgaac
      481 tccaccgaac ctccttccat gatgatgccc ggatgaaaga caggaatgtc gaaatggtta
      541 gcgatcaacg taggaattac atcatcaaga tcatatggag gatatttatc tccccatgca
      601 ttgtaattcc aatctacgat cacttttttt tgttttgcat gcgggttgat aagaaatgcg
      661 ggaccatgat cgcggcacca tgcatcattt gttgggttaa gaaagaattg aacccgcgac
      721 atgttgacat cgttcttaga cagcacgtct tccgcaaaag ccttcatcac ttcatcgttc
      781 acattaatgc gaacagtttc gccttcggtc agctccttaa caaattttgc atacgacggg
      841 taaatcgtat gaatttttcc aggccatgat gcttctttat gtggccagct cagccacgtt
      901 gcttcgtgct ttgcaaattc tgccggaaaa tagtagccaa gttgtttggg ggtgggaggg
      961 gagtccgaaa gtccggaaga cggagagtct ggaagtcggt gagacggaga gtctggaaga
     1021 ccggaagttt gggagtcgga actattggct gttgagtcgg cagaaggcat gtcgttattt
     1081 tttgctgttg agcgaacgtc taagcgcgtt tatcataacc aaaatctctt cgcaagacat
     1141 atagactcta ttgaaatctt cttcgtcgat gatattgcgt ttgcttgcta aaaaaatgca
     1201 accaactact tcaatgttcc aacgaagtgc gatcgatcac aacttcaatc aataaacctc
     1261 tttacaatcg gttcataaga atcgatcctg cggtcccgca aaaatggcca gtgtgttcga
     1321 tattgatctg tcttttcaag gtcgagctca gctaagaaaa cttcttcatt atcatgcgat
     1381 gccttgtata aaagtcggcc aaacgggttt gcaataaaag atcctcccca gaatttcatg
     1441 ttgccgtttt gttcaaaccc tgtacggttc acgctcacca cgtgaacacc attagccacc
     1501 gcatggcttc gctggatcgt ttgccatgct tcatattgtt cgttgttcgt agcttcgtcc
     1561 tgggacgttg cccaaccgat cgctgtcggg taaaataaaa tttcagcacc cattaatgac
     1621 gtgatccttg ctgcttccgg gtaccattgg tcccaacaga tcaaaacacc aatcgtcgca
     1681 tattttgttt tgaaaacttt atagccaagg tcgcccggtg tgaaataaaa cttctcataa
     1741 taagccgggt catcaggaat gtgcatttta cgatacttac ccagtaaagt gccatccgca
     1801 tcaatgacca cggtggtgtt atgatatatg cccttcgttc ttttttcaaa tagcgatgct
     1861 acgatcacaa tgtttagttc agccgccagg gtgcttaagg tttcg
//
LOCUS       DASQJI010000208         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_173690,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000208 DASQJI010000000
VERSION     DASQJI010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173690"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VEV83_06160"
     CDS             <1..682
                     /locus_tag="VEV83_06160"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44728.1"
                     /translation="FRILIATAAIGAVYGIYQYRLQHALKLQAVRNRIASDLHDEIGS
                     NLSNISIFSKVARQRKPETPQVSDLLGKISEYTQTSMNAMNDIVWMINARNDRFENIM
                     VRMRTLASELFEATNCNLHIEFDERLNSVKLDMDDRKNFYLIFKEAVNNVAKYAGCTD
                     VWINMNLKSKNVVLTIKDNGKGFDVAQVNRGNGLLNMKNRTGTLKGDFKITSTTGSGT
                     EIELSFPV"
     gene            1022..1660
                     /locus_tag="VEV83_06165"
     CDS             1022..1660
                     /locus_tag="VEV83_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44729.1"
                     /translation="MKVRILVYDDNIGRQEALKLLVSDTPDMEFVGAKENCNAVENDI
                     ARLQPDVVLMDIDMPLVNGIEGLKRIKKLAPNIFIIMQTVFEDEKKIFDAIRGGADGY
                     FLKKTDPDKLIEGIRDVLDGGAPMTPSVAKKVLEMFHHQASGKKENFFALTAREIEIL
                     SMLTKGLSYKMIADGTGLKYHTVNSHLKKIYDKLHVHSATEAVAKAFDEGLV"
BASE COUNT          584 a          371 c          446 g          478 t
ORIGIN      
        1 gtttagaata ctaattgcaa cagcagcgat cggcgctgtt tacggaattt atcagtaccg
       61 tttgcaacat gcattgaagt tgcaggctgt ccgtaacagg atcgcaagtg atctgcatga
      121 tgagatcgga agtaacctga gcaatatttc gatctttagc aaggtagcgc gccaacgaaa
      181 accggaaaca ccgcaagtgt ctgatctgct aggaaagatc agcgagtaca cacaaacatc
      241 gatgaatgca atgaatgata ttgtctggat gatcaatgcg cgcaacgacc gttttgaaaa
      301 catcatggtg cgcatgcgaa cgcttgcctc tgaattattc gaagcaacga actgcaatct
      361 tcatattgaa ttcgatgaaa ggctgaacag cgtaaaactc gacatggacg atcgaaaaaa
      421 cttctaccta atttttaagg aagcggtgaa caacgttgct aaatacgcgg ggtgcaccga
      481 tgtttggata aacatgaatc taaaaagtaa aaatgtcgtg ctgacgataa aagacaacgg
      541 gaaagggttc gatgtcgctc aagtgaaccg cggtaatggt ttgttgaata tgaagaaccg
      601 gacgggtact ttgaaagggg attttaaaat cacaagcacg actggaagcg gaacggagat
      661 tgagttgagt tttccggtct agccaattca gtacagcttc gtgtgcgttg tgcgatcgtt
      721 gtgttcgttg tgttccataa attcattgcc actttaaaac gaagcaaaca caaaagtgca
      781 accacttgct cctcatgccc aacccgattg gggcgcctgc ccttaaaagt ttaggagctc
      841 tgaacacaaa aatatacgca ctcaaaattc ggcaagcaga ttccccgtcg ttgccgggaa
      901 tgacgtctac gaggttgagc aattttaagc aaccagtctt gcggtcaact ggccctgctt
      961 gaaacccctt gcctacattt agggatacca tatatcagcg cagataaaat atttttacat
     1021 catgaaagta agaatacttg tatatgatga caatatcggc cggcaagaag cgctgaaatt
     1081 actagtgagc gatacgccgg atatggaatt tgtgggagca aaagaaaatt gcaacgcagt
     1141 tgaaaatgat atcgcccgtt tgcaaccgga tgttgtattg atggatattg atatgccatt
     1201 ggtgaatggt attgaaggat taaaacggat caagaaactg gcgccaaata ttttcatcat
     1261 catgcaaact gtttttgaag atgaaaaaaa aatatttgac gcaatacgtg gcggcgctga
     1321 cgggtatttt ttgaagaaga ccgatcctga taaattgatc gaaggcatcc gcgacgtgct
     1381 ggacggcggt gcgccgatga caccatcggt cgcaaaaaaa gtattggaaa tgtttcatca
     1441 ccaggcatcc ggcaaaaaag aaaacttctt cgcgttgact gcgcgtgaga tcgaaatatt
     1501 gtcgatgctt acgaaagggc tcagctataa aatgatcgcc gacggtactg gtcttaaata
     1561 tcacacggtg aactctcatc ttaaaaaaat ctacgacaag ctacatgttc attctgcaac
     1621 agaagcagtg gcgaaagcat ttgatgaagg attggtttaa cgttgcgttg ccgaccacat
     1681 taaatagaag aaccccctgc taaagtaagc aagaggttct aagtcccaac cttaaccaag
     1741 tttatagaga gaacctttct aaaagcgttg acgttacatc agagatcttg aatgatgatt
     1801 gaatcgccgg ggcaacttct gttctgattt tagttgtcgt cgttgttgat tgcgaatctt
     1861 tcgatggctg gtagtgata
//
LOCUS       DASQJI010000209         3054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2784727,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000209 DASQJI010000000
VERSION     DASQJI010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2784727"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..446
                     /gene="panD"
                     /locus_tag="VEV83_06170"
     CDS             102..446
                     /gene="panD"
                     /locus_tag="VEV83_06170"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HYK44730.1"
                     /translation="MEIEILKSKIHRAVITEANLQYVGSLTLDENLMDAANLIENEKV
                     QVVNVNNGSRLETYVIKGKRGSGTVCLNGPAARQGAVGDVVIIISYATMDFEAAKKFK
                     PWLVFPKEGNKL"
     gene            486..977
                     /gene="rfaE2"
                     /locus_tag="VEV83_06175"
     CDS             486..977
                     /gene="rfaE2"
                     /locus_tag="VEV83_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HYK44731.1"
                     /translation="MKTITAVEQKILSPEKLDAWLRSKRLTSKTIAFTNGCFDILHEG
                     HIFSLSQAAKEADCLIVGVNSDASVTRLKGEHRPINNQHSRSLVLASLLIVDAVIAFD
                     EDTPLELIKKVVPDVLVKGGDYTIDTTVGAKEVMANGGRVVINPIIPGFSTSGLIEKI
                     KSL"
     gene            1096..>3054
                     /gene="ppk1"
                     /locus_tag="VEV83_06180"
     CDS             1096..>3054
                     /gene="ppk1"
                     /locus_tag="VEV83_06180"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HYK44732.1"
                     /translation="MKNLIPRDISWLSFNARVLQEAVDPSVPLRERIRFLGIHSNNMD
                     EFFRVRVATLKRMIELGAKKANMHLEDNPEQILDQIQMIVLDQQNEFNRIWHGILKEM
                     EGQNVFLIDEKKLNRQQQQYVKTFFEEEVRSNIIPLMIESLPQLPYLREKSIYLGVVM
                     RKEDTAYQQKYALIEVPSRIVGRFVQLPSPEGQHHIILLEDVIRFNLPFIFSYFDYTK
                     FDSYIFKVTKDAELDIDNDLTTSFVQKIQKGLKNRRIGKPTRFVFDKEMDAGLLEYLM
                     RKLNLSRKDNIIPGGRIHNFRHFMDFPDVFPQKNIRRAPFIHPLLKDIPSITNVILKQ
                     DVLLNFPYHSFDSVIDLLREAAMDPEVILIRITAYRLATNSKVINALINAVRNGKDVT
                     VMLELSARFDEEANLFWKDRLEEEGVKVLVGIMNMKVHAKLCVIKKRSGKKTTQYGFV
                     STGNLNEKTAKLYADHCLLTANRNVMADINRIFKFLESPKPRVQDLRQCKTLMVCPTF
                     MREQLLQLINTEIKNARAGKEAAIYLKVNSLSDPQMIDKLYDAASEGVELRMIIRGIC
                     SAKFKNKKWKDKVTAISIVDEYLEHSRILVFHHGGNEKIFISSADWMIRNLDHRIEAA
                     IPVTKKSLRNQLKDILDIQLRDNVKARTL"
BASE COUNT          921 a          631 c          711 g          791 t
ORIGIN      
        1 cgtttatgta tgagctcaac tccctcacca gccgcgttct gagctcgttc atacgccctg
       61 caactttttc ctaacataac ttcactaaat ttgcgcccgc aatggaaatc gagatcctga
      121 aatcgaaaat acaccgggcc gtcattacag aagcgaatct gcaatatgtc ggcagcctta
      181 cgcttgatga aaacctgatg gatgcggcaa acctcatcga aaacgaaaag gtgcaggttg
      241 ttaacgttaa taatggttcg aggctcgaaa cttacgtgat caaagggaag cgtggcagcg
      301 gcaccgtttg tttgaatggc cccgctgcac gacaaggagc cgtcggtgat gtagtcatca
      361 ttatttctta tgcgacgatg gactttgagg cggcaaagaa atttaaacca tggttggtgt
      421 ttcctaaaga agggaataaa ctatgagctg tcctgaaatc aaaaacaaaa ttcttttgaa
      481 aatttatgaa aactatcacg gcggttgaac aaaaaatact ttcgcccgaa aagcttgacg
      541 cctggcttag atcgaaacgt ttaaccagca aaacaattgc tttcacaaat gggtgctttg
      601 acattttgca tgaagggcac atattttctt tgtcgcaggc tgcaaaagag gcggattgcc
      661 tgatcgtggg tgtaaattcc gacgcaagcg ttacgaggct gaagggtgaa catcggccaa
      721 taaacaatca acacagccgt tccctcgtgc tggcttcctt attgatcgta gatgcggtga
      781 tagcattcga tgaagacaca ccgcttgagc tcatcaaaaa agttgttccg gatgtgttgg
      841 tgaagggcgg cgattatacg atcgatacaa cggttggcgc aaaagaggtg atggccaatg
      901 gtggaagagt agtgatcaac ccgatcatcc ctggtttttc gacatcggga cttattgaga
      961 aaattaagag tttgtaattg tgaagttgtg aatggtcaat ggtgaatggt gaataaatcc
     1021 caattcctaa atcctgcttc ctaattcctg cttcctacat cctaacccgt tatatttggc
     1081 ttgtttttgc ttcatatgaa gaatttaatt ccgagagata taagttggct tagtttcaat
     1141 gcacgggtgc ttcaagaggc tgttgatcct tcagtgccct taagagaacg tattcgtttc
     1201 ctggggattc attcgaacaa tatggatgaa ttttttcgcg tgcgggttgc aaccttgaaa
     1261 cgtatgatag aactgggcgc aaaaaaagcg aacatgcatc tcgaggacaa tccggagcaa
     1321 atactcgacc agatacagat gatcgtactg gaccagcaaa atgagtttaa ccggatctgg
     1381 cacgggatct taaaagaaat ggaaggccag aatgtttttc ttatcgacga gaaaaaattg
     1441 aaccggcagc agcagcagta tgtgaaaaca tttttcgagg aagaagtgcg ctcgaacatc
     1501 atcccgctga tgatcgaaag cctcccgcag ttgccttatt taagggagaa aagcatttac
     1561 ctgggcgttg tgatgcgaaa agaagacact gcttaccagc aaaaatatgc tttgatagaa
     1621 gtgccaagtc gcattgttgg acgttttgtc cagttaccgt ctcctgaagg ccaacaccac
     1681 attatactgc ttgaggatgt tatccgcttt aatctgccgt ttatcttttc ctacttcgac
     1741 tatacgaagt ttgactccta tatctttaag gttaccaagg atgccgaact tgatatcgat
     1801 aatgacctta cgacttcatt tgttcaaaag atacagaaag gcttgaaaaa tcgtcgcatc
     1861 ggtaagccca cacgttttgt gtttgacaaa gaaatggatg caggcttgct ggaatacctg
     1921 atgcgcaaac ttaatctttc aagaaaagac aacatcattc ccggcggacg tatacacaac
     1981 ttcaggcact ttatggattt tcctgacgtg tttccgcaaa aaaatatcag gcgcgcccca
     2041 ttcatccatc cactgctgaa agatataccc agcatcacca atgtgatact aaaacaagac
     2101 gtattgctta attttcccta tcactctttc gattcagtga tagacctgct acgcgaagca
     2161 gccatggatc ctgaagttat attgatcagg atcacggcgt accggcttgc gacaaattca
     2221 aaagtgatca atgcgctcat taacgccgtc aggaatggca aagatgttac ggtgatgctc
     2281 gagctaagtg cacgtttcga cgaagaagca aatttgtttt ggaaagaccg gcttgaggaa
     2341 gaaggcgtga aggtgctggt agggattatg aatatgaaag tgcatgcaaa gctttgtgta
     2401 attaaaaaaa ggagcgggaa aaaaacgacc caatatgggt ttgttagtac gggcaatctc
     2461 aacgaaaaga ctgcgaagct gtatgctgat cactgtctgc tgactgcgaa caggaatgtg
     2521 atggccgaca ttaaccggat attcaaattt ctcgaaagtc cgaagccacg tgtgcaggac
     2581 cttcgacaat gcaagacgtt gatggtgtgc ccgacattta tgcgtgaaca attgttgcaa
     2641 ctcatcaata cagaaataaa gaatgcgagg gcaggcaagg aagcagcgat ctatttgaag
     2701 gtaaattcac ttagcgatcc tcaaatgatc gacaaattgt atgatgcggc ttccgaagga
     2761 gttgagttaa gaatgataat ccgcggaatt tgctcggcaa aattcaaaaa caagaaatgg
     2821 aaggataaag ttacagcgat cagtatcgtc gacgaatacc tggaacactc ccgtatcctg
     2881 gtgttccatc acggtggcaa cgaaaagata tttatatcgt ctgctgattg gatgattcga
     2941 aacctggatc atcgcattga agcagcgata cctgtcacca aaaaaagttt gcgaaaccag
     3001 ctaaaggata ttctcgatat tcagttacga gataacgtga aggcacgcac tctc
//
LOCUS       DASQJI010000210         9398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1555972,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000210 DASQJI010000000
VERSION     DASQJI010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9398
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555972"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1676)
                     /gene="atpD"
                     /locus_tag="VEV83_06185"
     CDS             complement(174..1676)
                     /gene="atpD"
                     /locus_tag="VEV83_06185"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HYK44733.1"
                     /translation="MANTGKVKQVIGAVVDVYFPESTLPEIYNAIEVQRPNGEKLVLE
                     VQQHLGEDSVRCIAMDATEGLVRGTAVIDTGKAIAMPTGEAIHGRLFNVIGDPIDGLP
                     AVDKTHGRPIHSLPPAFENLTTATEVLFTGIKVIDLIEPYAKGGKIGLFGGAGVGKTV
                     IIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMIEAGIMKYGDSFKHSMEEGGWD
                     LSKVDMEGLKDSRATFVFGQMNEPPGARARVALSGLTIAEYFRDGDGTGKGRDILFFV
                     DNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGIMQERITSTRYGSITSVQAVYVP
                     ADDLTDPAPATTFAHLDATTVLSRKIADLGIYPAVDPLDSTSRILTPIIVGDLHYNCA
                     NRVKLILQRYKELQDIIAILGMDELSEEDKLVVARARKVQRFLSQPFHVAEAFTGLKG
                     VFVSIEDTIRGFNMIMDGEVDDYPEAAFNLVGTIEDAIEKGKKLIEQAKG"
     gene            2110..3966
                     /locus_tag="VEV83_06190"
     CDS             2110..3966
                     /locus_tag="VEV83_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44734.1"
                     /translation="MKRFLLSFVFITSFTPALRLIAQDADEIIFNQYLPQYNYAGGSF
                     VIDTGLSATKQKRAFLIWANDLWSDSINRYMSLSEYDPNLNFLTEQGNTSEKFGSIKN
                     MFPKKIIKSRFAHVYYVLGYVINSNHKINKLNVYSSPTLYKIDGNTLGLIWSRKINVL
                     VNANNLNTVIEYNDMVETRDKGIVLVGKYAASTRSKESVFATKINSSGTLVWRYLYKT
                     GNDCNEAANSVAENTDGKLSITGYVKKCQTGSFTGNNDVFYLETQANGLPVAGAYTRF
                     VWPSNLNMWADKITRYTSVAGADQLIISGYVDVLSVTGATNRQILVMNMKQNDVLITA
                     HHIGDPKADVCNDLIVNTIAGSASDYRIYLTGQTGNYNPQTSVSADAYFLYAKFNSAT
                     GVGGIGELSTFPVTAAPYNNYRSRNGLEIKNAGDYQKFAILATGVYNTGTSSTTYTDV
                     LLRDFADTKASCIKQFDPPVTQFSVDGKSSTVSVDTPVINLYKESWARLHQLNVKEVC
                     NSISIDPNKALNLKTGADNSSQSLQTLRIQPNPAKSVIKIATSDGSLLAGRYNNAMIR
                     IYNTGMQAAKTISVTSAQGSSAQLSIADMRSGVYVVQLIRGDEILGCTFIKE"
     gene            4188..5276
                     /locus_tag="VEV83_06195"
     CDS             4188..5276
                     /locus_tag="VEV83_06195"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HYK44735.1"
                     /translation="MQATEANMKEVTLSAWNKRPLIISGPCSAETEEQVVETAVRLHK
                     TGKVDMLRAGIWKPRTRPGSFEGIGTKGLPWMQKAKQLTGLPVTVEVATGKQVEDALH
                     FEVDVLWIGARTTVNPFSVQEVADALRGVDIPVLIKNPINPDLELWIGAVERVAKAGI
                     KKLGLIHRGFSSYGNTEYRNAPMWHLAIEMKLRNPEMMMINDPSHIGGRRDILHDIAQ
                     KAIDLDYDGLMIEAHIDPDNAWSDAKQQVTPERLGEILGSIRWRKEDIPSEEFHAVME
                     KFRQQINHLDDELLQILSQRMKIAEKIGQYKKENNITILQTNRWNAILERAFTKGEKL
                     GLSKEFITKYFDAIHMESISHQNKIMNE"
     gene            5352..6386
                     /gene="aroB"
                     /locus_tag="VEV83_06200"
     CDS             5352..6386
                     /gene="aroB"
                     /locus_tag="VEV83_06200"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HYK44736.1"
                     /translation="MKKTTVKFSSASTTFYFDTSFNLLEDLTGTAKTVIITDENIFRA
                     HQKKFEGWNTIVLQAGEEYKIQRTVDSIIDQLIAFGVDRKSFLVGIGGGVITDLTGYV
                     AGIYLRGVKFGFVPTSVLAMVDAAIGGKNGIDVGLYKNMVGVIRQPEFLLYDYSFLKS
                     LPKTEWVNGFAEIIKHACIKDASMFKLLEQSKLSDFQKDRNLLNRIIQKNALLKARVV
                     QEDEFETGNRKLLNFGHTFGHAIENTYALPHGHAVAIGIVVACIISESYKNFRHTDRV
                     VALIRKYGLPAYHAFDAAKVSAVMRTDKKKVNDVINFVMLEKIGKAVVAPVSMDEISG
                     LITQLENKSS"
     gene            6391..7701
                     /gene="aroA"
                     /locus_tag="VEV83_06205"
     CDS             6391..7701
                     /gene="aroA"
                     /locus_tag="VEV83_06205"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HYK44737.1"
                     /translation="MKVRIVGNSLLANDGLSGAVHAAASKSSMQRACAAALVRRGESL
                     IRNPGRSNDDKAALDVIKRLGAQITTTDKYLKIKSYGVQAKSDTVSCGESGLGIRMFT
                     PIIALSENEITVNGEGSLLTRPMDFFDEVLPKLDVTISSNDGKLPIRIQGPLSPKNIE
                     IDGSLSSQFLTGLLFAYAALDAKDVSIRVTNLKSKPYIDLTLQVMEQFLLKVPENRNY
                     EEFYFEDTPVATTSDFVDYTVEGDWSGGAFLLVAGTIAGNMKVCGLDIASTQADKKII
                     RALEDCGSQFSMSDHEILFPRRDDRTVSLHPFVFDATDSPDLFPPLAALAAYCNGITK
                     IDGVFRLTHKESNRALTIQQELGKMGVKIDLHGNTMLIAGDNKVRGAVVSSRHDHRIA
                     MMCAVAALKAEGETTIDDADAINKSYPDFYRHLQSIGADLKIDD"
     gene            7973..8959
                     /locus_tag="VEV83_06210"
     CDS             7973..8959
                     /locus_tag="VEV83_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HYK44738.1"
                     /translation="MHIFGESHGEGVGVSIDGVPAGLPLTLEDFLPDIERRKGGTQKG
                     TTPRQESDLPIFKTGIFNNKTTGAPLTILFENKNVRSADYEKQRAVPRPGHADFVASK
                     KFGGFEDYRGSGHFSGRLTVCLVAAGVVAKKLIDLSAGTTVRASILEIGGETDLEKGL
                     QKAIDAKDSIGGIVECRANNLPVALGEPFFDSAESLLAHAVFAIPAVRAIEFGTGFAA
                     AKMFGSEHNDTIEDANGKTKTNHAGGIVGGLTNGNELVFRIAIKPTSSTPKQQQTLNW
                     ETNTVEPFSVKGRHDLCIALRVPVVLEAVTAIVLADLLTLEQHIPRVIKNAT"
     gene            complement(9008..>9398)
                     /locus_tag="VEV83_06215"
     CDS             complement(9008..>9398)
                     /locus_tag="VEV83_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK44739.1"
                     /translation="QKPSSEKTQAVLDSAAHSPVQQNRIVVKDGSKIKIIPVIQIHYI
                     EAADDYVKIFTPEGSFLKKKTMGYFENSLETFHFVRVHRSYIVNTQLITRIDPYEKDS
                     HLLLLSTGAKLPVSKAGYSKLKEVLGI"
BASE COUNT         2708 a         2078 c         2192 g         2420 t
ORIGIN      
        1 tcaaaagaac cagcgatccc gggtaattgg atgccgtaaa cttcgccgct atataatctt
       61 gtttccggtg ttagtatttc gagcgtcata atttgaaaat ttgaaatttg aaaatttgaa
      121 aatggatgtc gcgtgattaa ctattcaatt agcacatttt caaaatcttc aaattatccc
      181 tttgcctgct ctataagttt cttacctttt tcaatcgcgt cttcaatcgt gcccacgagg
      241 ttgaatgcgg cttctggata gtcgtcaact tcaccatcca tgatcatgtt gaatccgcgg
      301 atcgtgtctt caatgctgac aaacacaccc ttcaaacctg tgaaggcctc ggcgacatgg
      361 aacggttggg aaagaaagcg ttgcactttt ctcgcgcggg caacaactag cttatcctcc
      421 tcactcaatt cgtccatacc gagtatcgca ataatatcct gcagttcttt ataccgctgt
      481 aagatgagtt taaccctgtt cgcacaatta taatgaagat cacctacaat aattggcgta
      541 agaattcttg aagtggaatc aagtggatca accgcgggat agatgccaag gtcagcgatc
      601 ttacggctta acacggtcgt cgcatccagg tgtgcgaatg ttgtagctgg tgccggatct
      661 gttaggtcat cggccggcac atatactgcc tgaacagacg tgatggaacc ataacgtgtt
      721 gaagtgatcc gttcctgcat gatacccatt tccgttgcaa gcgttggttg ataacccaca
      781 gctgacggca tacggcccaa aagcgcggat acctccgaac cggcctgcgt gaaacggaat
      841 atattatcaa cgaaaaataa aatatctctc cctttgcctg tgccatctcc atcgcggaaa
      901 tattccgcaa tggtcaatcc gctcaatgca actctcgcgc gggcacccgg cggctcattc
      961 atttgtccaa atacgaaagt ggccctggaa tcttttaggc cttccatatc caccttgctg
     1021 aggtcccagc cgccctcttc catactgtgc ttgaaactat cgccatactt catgataccg
     1081 gcttctatca tttcgcgtaa aagatcgttt ccctcacgcg ttctttcacc cacaccagca
     1141 aacacagaca agcccccata tccttttgcg atgttgttga tcagttcctg tataatcacc
     1201 gttttgccaa cacccgcacc tccaaataac ccgatcttac ctcctttggc atacggttct
     1261 atcaggtcaa tcaccttgat gcccgtgaac aaaacttccg tagctgtggt caggttttca
     1321 aaagccggcg gcagggaatg tattggccgg ccatgggttt tgtcaacagc aggcaatcca
     1381 tcaatagggt cgcctatcac attaaaaagc cttccatgaa tggcttcacc ggttggcatt
     1441 gcgatggctt tgccggtgtc aattaccgcc gtgccgcgaa caaggccttc ggtcgcatcc
     1501 attgcaatac accgaacgct gtcttcccca agatgttgct gaacttcaag aaccaatttt
     1561 tcgccgtttg gtcgctgtac ttctattgca ttgtaaattt ccggcaatgt gctttccgga
     1621 aaatacacgt cgacaacggc gccaattact tgttttacct taccagtgtt agccataaat
     1681 atttgagatt ttgcagcttt tgtaatggca aaagcgcttt tgaattttgc cgcaaaggta
     1741 aggggaggca ggcaaaaatc cgaattatag tttcgctgtt ggtttgttta ttcaaagcaa
     1801 tcggatctct ttcgtttcaa tgtatcacgc cgcctaaaac aagtatcgtt tgaaggaatt
     1861 ctaataacgt cagcgtcgaa aaacacacag cgtaaaaagt ttctgaaaac ttaaatccgt
     1921 tttttattca tcggtaaacg taaataaaac gctttcggta ataaagtctt caacttttcc
     1981 ttgcaattgt agttttaaag ggatatatta gccatctata ctcctctgaa actatttcca
     2041 ctaacatgtt tttcaaggcg aattccgaaa agcctaaaaa gagtaggagc taacttacaa
     2101 ttttcagtca tgaaaagatt tctattatcc tttgttttta ttacttcatt tacgccagct
     2161 ctccgcttga tcgcgcagga tgccgatgag atcattttca accaatatct gccgcaatac
     2221 aactatgccg gaggaagttt cgtgatcgac acgggcttat ccgccaccaa acaaaaacgc
     2281 gcatttctca tttgggcaaa cgatctgtgg tccgatagca ttaaccgtta tatgagcctg
     2341 agcgagtatg atcccaattt gaattttctc accgaacaag ggaacacgtc cgaaaaattc
     2401 ggttcaataa aaaatatgtt cccgaaaaag atcatcaagt caagatttgc gcatgtatac
     2461 tatgtgctcg gatatgtgat caattcaaat cataagatca acaagcttaa cgtctattct
     2521 tcgcctaccc tttataaaat tgacggcaat acgcttgggc tgatctggtc acggaaaata
     2581 aacgtcctgg tgaacgcaaa caatttgaac acagtaattg agtacaacga tatggtcgag
     2641 acgagggata aagggatcgt attggttggt aaatatgctg ccagtacacg gtcaaaagaa
     2701 tcggtgtttg caacgaagat caattcatca ggtacgttgg tatggcgcta cctgtacaag
     2761 acaggtaacg actgcaatga ggccgccaat tcagttgcag aaaataccga cggcaaattg
     2821 tccataaccg gctacgtcaa aaaatgtcaa accggttcgt tcaccgggaa caacgacgtc
     2881 ttttatttag agactcaagc caacggcctt ccagttgcag gtgcttacac acgattcgtt
     2941 tggccttcga atttgaatat gtgggcagat aagatcacgc ggtatacttc ggtagctggt
     3001 gctgatcaac tcatcatttc aggctacgtt gatgtattaa gtgttaccgg cgccacaaac
     3061 aggcaaatat tggtgatgaa tatgaaacaa aacgacgtgt tgataaccgc acatcatatc
     3121 ggtgatccaa aagccgatgt ttgtaacgat ctcatcgtta acacaattgc tggcagtgcg
     3181 agtgactacc gcatctatct tacgggtcaa acagggaact acaatcctca aacctccgtt
     3241 tcggcagacg catacttcct gtatgcaaaa tttaattctg cgaccggcgt aggcgggata
     3301 ggtgagttaa gcacgttccc ggtaaccgcg gcaccgtata acaactacag aagccggaat
     3361 ggcctggaaa taaaaaatgc aggagactat caaaagtttg cgatcctggc aacgggcgta
     3421 tacaacacag gcacttcgag cacaacttat accgatgtcc tgctgcgcga ttttgctgat
     3481 acaaaagcca gttgcataaa acagtttgat ccgcctgtta cgcaatttag tgttgacgga
     3541 aagtcctcaa ctgtatcagt tgacacgccg gttataaacc tttataaaga aagttgggcg
     3601 aggctacacc aattaaatgt gaaagaggtt tgcaatagca tcagcatcga tccgaataag
     3661 gcgttaaacc tgaaaacggg agctgacaat tcatcgcagt cgttacaaac gcttcgcatc
     3721 cagccaaacc ctgcgaagtc cgttatcaaa atcgcaactt cggacggctc attgcttgcc
     3781 ggcagataca acaacgccat gataagaatt tataatacag gcatgcaggc agcaaagacc
     3841 atttcggtca catcagcaca gggatcatcc gcacaattat cgattgcaga catgcgatca
     3901 ggagtatatg tggttcaatt gatacgaggc gacgaaattc tcggatgcac gtttatcaaa
     3961 gaataaccaa aatcagcata tgcatagaat gccttgcctt gtgcagggca tttttatttt
     4021 gcggcttata acgtttgtta gttagttgcc ataacgataa ttatgcctgt cgttcaagcc
     4081 aaaatcaaca tttgtcgtta atttcgctgc tttctgtaaa ggacttgcgc tcccgccagg
     4141 cgagcaatca tcgttactca cagaagccta ttaaaaatca taaaggaatg caagcaactg
     4201 aagcaaacat gaaggaggtc actttatcgg catggaacaa aaggccattg atcatatccg
     4261 gtccgtgcag cgccgaaact gaagaacaag ttgtagaaac cgccgtgcgg ctgcacaaaa
     4321 cgggaaaagt agacatgctc cgcgcgggca tttggaaacc gcgcacaagg ccgggaagtt
     4381 ttgagggcat cggcacgaag ggcttgccgt ggatgcagaa ggcgaaacaa ttaacaggat
     4441 tgccggtcac cgttgaagtt gcaaccggaa aacaagtgga agacgctttg cattttgaag
     4501 tagacgtttt atggatcggc gcacggacaa cggtgaatcc ttttagcgtg caggaagtag
     4561 ccgacgcatt gcgcggtgtt gatataccgg tgttgataaa aaatccgatc aatccggatc
     4621 ttgagttgtg gataggtgcg gtggaacgtg ttgcgaaagc gggaataaag aaattgggac
     4681 ttatacatcg cggctttagt tcgtatggca acaccgaata tcgtaacgcg ccgatgtggc
     4741 atcttgcgat tgaaatgaag ttgcggaatc cggagatgat gatgatcaac gacccgtcac
     4801 atatcggcgg tcgtcgtgat attctgcacg acattgcgca aaaagcgatc gaccttgatt
     4861 atgatggact gatgatagaa gcgcacatag atccggataa tgcatggagc gatgcaaaac
     4921 aacaggtgac acctgaacgc ctcggggaaa tacttggcag catacgctgg agaaaagaag
     4981 atataccatc cgaagaattt catgccgtta tggaaaagtt ccgccaacaa ataaatcatt
     5041 tggacgatga gttactgcag atacttagtc agcgtatgaa gatcgctgaa aagataggtc
     5101 agtataaaaa ggagaacaac atcaccatcc tccaaaccaa tcgctggaat gcgatccttg
     5161 agcgcgcgtt cacaaaaggc gagaagcttg gtttaagcaa ggaattcatc acaaaatatt
     5221 tcgatgccat tcacatggag agtatcagtc accagaacaa gataatgaac gaatagaagc
     5281 cccaccagcc ttccgcaccg gcggaaggtt ttttgtttta ggcttgcaat tctgcattcg
     5341 cgcgacaaaa aatgaaaaaa acgacggtaa aattcagttc cgcttccact acattttatt
     5401 tcgacacttc ttttaatctt cttgaagatt tgacgggaac ggcaaagacc gttatcatca
     5461 ctgacgaaaa catatttcgc gcgcatcaaa aaaaattcga aggctggaat acgatcgttt
     5521 tacaagccgg cgaagaatat aagatccagc gaacagtcga cagcatcatt gaccaactta
     5581 tcgcgtttgg cgttgacaga aaatcttttc ttgttggcat tggtggcggt gttatcacag
     5641 atctcacagg atatgtagca ggtatttatt tgcgcggtgt gaaattcggt tttgttccaa
     5701 catcggtgct tgcaatggtg gatgcagcga taggtggaaa gaacgggatc gatgtgggcc
     5761 tttataaaaa tatggtcgga gtgatccgcc aacccgaatt tttattgtac gactattctt
     5821 ttttaaagtc attgccgaaa acggaatggg tcaatggttt tgcggagatc atcaagcatg
     5881 cgtgcatcaa ggacgcatcg atgtttaagt tacttgagca atcaaagctg agcgattttc
     5941 aaaaagatag aaatctgctg aatcggatca tccaaaaaaa tgcgctatta aaagcgcgtg
     6001 tcgttcagga agatgaattt gaaactggca acaggaaact tttgaatttt ggccacacgt
     6061 tcgggcatgc tattgaaaat acatatgcgc tgcctcatgg gcatgccgtt gccatcggga
     6121 tcgtcgtggc atgtatcatc tccgaatctt ataaaaactt cagacacacc gaccgtgttg
     6181 tagcactcat cagaaaatac ggtttgccgg cttatcatgc ttttgatgcg gctaaagttt
     6241 cggcggttat gagaacggat aaaaagaaag taaacgacgt tataaacttt gtgatgctgg
     6301 agaagatcgg caaagctgtt gttgcgccgg tttcgatgga tgaaatatca ggcttgataa
     6361 ctcaattaga aaacaaaagc tcttagctgc atgaaagttc gcattgtcgg caattccctt
     6421 ttggcaaatg atggtttaag cggcgcagtt catgcagcgg catcaaaaag ctcaatgcaa
     6481 agagcctgcg cggcggcgtt agtgaggcgc ggagaaagct taattcgaaa tcctgggaga
     6541 agcaatgatg ataaagccgc actggatgta attaaacgac tgggtgcgca aatcacgacg
     6601 acggataaat acttaaaaat aaaaagttat ggcgttcagg cgaagtctga tacagtaagt
     6661 tgcggggaaa gtggcttggg catcaggatg ttcacgccga taattgcgct gagtgaaaat
     6721 gagatcaccg ttaacggcga aggaagtctg ttaacacggc ccatggattt ttttgatgag
     6781 gtgctgccta aactggatgt aacaatttct tcgaatgacg gtaagcttcc gataagaata
     6841 caaggcccgc tcagtccaaa gaatatagaa atagatggat cattgagctc tcaatttctc
     6901 acgggtttgt tgtttgctta tgcagcactg gatgcgaagg atgtcagcat ccgggttaca
     6961 aatttaaaaa gcaagccgta catcgatctt acattacagg tgatggaaca gttccttttg
     7021 aaggttccgg agaacaggaa ttatgaagaa ttttattttg aagatacgcc tgttgcaacg
     7081 acgtcagatt ttgttgacta caccgtcgag ggcgactgga gtggaggtgc cttcttattg
     7141 gtggccggca ctattgcggg aaatatgaag gtgtgcggat tggatatagc gtctacgcag
     7201 gcagacaaaa aaataattcg ggcacttgaa gattgcggca gccaattttc aatgagcgac
     7261 catgaaatct tgtttccacg gcgcgacgat cgaacagtta gtttgcatcc gtttgtcttt
     7321 gacgctaccg actctcctga tctttttcca ccacttgcgg cgcttgctgc ttactgcaac
     7381 gggattacaa aaattgatgg cgtgtttcgc ctcacacata aagaaagcaa ccgcgcattg
     7441 acgatccagc aggaattggg taagatgggt gtgaagatcg atctgcacgg caatacgatg
     7501 cttattgcgg gcgacaataa agtacgaggt gctgttgtga gttcaaggca cgaccaccga
     7561 attgcaatga tgtgcgcagt tgcggcattg aaagctgaag gagaaacaac gattgatgat
     7621 gcggatgcga tcaataaatc gtatccggat ttttacagac atttacaatc tataggcgct
     7681 gatctgaaaa tagatgatta atcggttgtg caaataagaa tcaaagatgg tatgagtggg
     7741 aaactggccg actttgtgaa acctcgtgcc ttggtgtctt agtggtttct gtatttcttg
     7801 ccacgaaggc tcgaaggcac acaaagacac actaagaaaa atgagccgca gattccgaaa
     7861 atcaatagca caacacggca gatgattcga tgttcaatga acgatgagcc gccaacaaaa
     7921 ctccctttac gggacgggga tttttatgaa ttcatccggt cgaatatttc gcgtgcacat
     7981 atttggtgaa tcacatggcg aaggtgtggg cgtatccatt gatggagtgc ctgccggtct
     8041 gcctttgaca ctggaagatt ttttacctga catcgaacgt agaaagggcg gcacacaaaa
     8101 aggaactacg ccaagacagg aatcggatct tccgatcttc aaaaccggca tcttcaacaa
     8161 taaaacaacc ggcgccccgc tcactattct cttcgaaaat aaaaatgttc gatctgccga
     8221 ctatgaaaag caacgtgctg tgccccggcc cggccatgca gattttgtag caagcaagaa
     8281 atttggcggc ttcgaagatt atcgcggcag cggccacttc agcggaagac taacggtgtg
     8341 ccttgtggcg gcgggagtag ttgcaaaaaa attaattgat ctcagcgccg gcactacggt
     8401 ccgcgcttcc atcttagaaa taggtggcga gacagacctt gaaaaaggtt tgcagaaagc
     8461 tatagacgcc aaagattcta tcggaggcat cgtggaatgt cgtgcgaata atttacctgt
     8521 tgcactggga gaaccttttt ttgacagcgc cgagtcgtta ttggcgcatg ctgtttttgc
     8581 aatacctgcg gtcagagcta ttgaatttgg gaccggcttt gctgcggcaa agatgtttgg
     8641 cagcgaacac aacgatacga tcgaagatgc gaatggaaaa acaaagacca atcacgccgg
     8701 ggggattgtg ggcggcctca cgaacggcaa cgagctggtt tttcgaattg cgatcaagcc
     8761 aacatcatca acaccaaaac aacagcaaac attaaattgg gaaacaaata ccgttgagcc
     8821 gttttcagtg aaaggccgtc atgacctgtg tatcgccctg cgcgtgccgg tagtattgga
     8881 agctgtaacc gcgatcgtgc tcgctgactt gctgacgctg gaacaacaca ttccaagagt
     8941 tatcaaaaac gcaacatgaa acttgcaacc tgcaacttgc caccccccac ctgaaactcg
     9001 caccccctca aatccccaac acttccttca atttcgaata accggccttg ctcacgggta
     9061 attttgcgcc ggtacttaac agtaataagt ggctgtcttt ttcataaggg tcgatccgcg
     9121 tgatgagttg cgtgttgacg atatatgagc gatgcacgcg tacgaaatga aacgtttcaa
     9181 gcgagttttc aaaatagccc atagtctttt ttttcaggaa cgaaccttcc ggcgtgaaga
     9241 tcttgacata atcatctgct gcttcgatgt agtgaatttg aatcacaggg atgatcttta
     9301 ttttgcttcc gtcttttacg acgatgcgat tttgctgcac gggtgaatgc gctgccgagt
     9361 caagcactgc ctgggttttt tccgaagaag gtttctgc
//
LOCUS       DASQJI010000211         9669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2323775,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000211 DASQJI010000000
VERSION     DASQJI010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9669
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323775"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VEV83_06220"
     CDS             <1..1069
                     /locus_tag="VEV83_06220"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HYK44740.1"
                     /translation="AERHYKILMAGVDQFGGNNVAGPVLEAYQMGVKEHGEAWMRQRF
                     EQSAVRLLRNIFRVGLFENPYLDPQQSVQIVGNADFMKAGYDAQLKSIVMLKNKGNVL
                     PLEQTSAGSGGKTVYIPKRVVPAARDFFGNVTPERIEYPVNVEVVKKYFNVTDDPSKA
                     DVAIVFVKGPNSGVGYSKDDRQNGGNGYVPISLQYGPYTATDARDASIAAGDPVVDPT
                     ITNRSYKGKTVSANNVTDLKLILDTKTAMNGKPVIVCMGLTNPAVVAEFESQVQGIVV
                     SFGVQDQALMDIISGKAEPSGLLPLQMPANMETVEQQKEDVPQDMKPYTDNEGHTYDF
                     AYGLNWKGVINDARTAKYKKK"
     gene            1485..3407
                     /locus_tag="VEV83_06225"
     CDS             1485..3407
                     /locus_tag="VEV83_06225"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HYK44741.1"
                     /translation="MKNQLLSIAFVIFIVNAHGQNLLHAMQGERGVAKQYAEFAAQEQ
                     PVFNEKNAASILGLDKNSGLVLSSIETDRLGFTHFRFYQTYNGIAIDKTMLVAHVKDG
                     KLISVSAALVTDFNSAMKSGTATQKITTADAIGRAVAHVHALRYAWQDKNMEAALKEQ
                     TRNVTATYYPNAKKVWYNAGDQLDPATLHLAYKIDVYAEQPESRAFYFVDANSGEIIG
                     REERIHSTNAVGNANTLYSGTRTVQSEQMAANSYRLRDHNRGNGIITLNADKTDITNT
                     SFDWDLTLPGKNGLDAHWGVEMTYDYYKINFNRNSIDNNGYALYSYINKGGFLYSDNA
                     SWDGNAMNFGTRSNSDGAGVTGIDVTGHELTHGVTQFTCNLNYSKEPGAINESISDIM
                     GKSVQFFAKPADKDWRLSNDMNWFIRDMSNPNAYAQPDTYGGDKWLGGGFNYLLDNGG
                     VHTNSGVGNFMFYLLVDGGSGTNDIGNAYKVQGIGLSKADQIIYRSQTVYLVPTSQFT
                     DWRTACINAARDLYGKGSNELKQVKNAFYAVGIGTGAVATAVATNQIVSVTPNPVHGI
                     NAVAKFDLQSAGYVVMKLYDGSAQVLHVYNIGTREKGEQSFTLPGTAELKEGNYYITI
                     ENDGVAIGRGKFLVIN"
     gene            complement(3573..4331)
                     /locus_tag="VEV83_06230"
     CDS             complement(3573..4331)
                     /locus_tag="VEV83_06230"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK44742.1"
                     /translation="MKQLTAFTILFCVVIFSGCSKSGSSTPPPPPPPPPPDSLDSGLI
                     AYYPFTGNANDASGNNFDLTVHAAALTNDRNGSANKAYHFNGIDATMDVPAFAGTDSL
                     PTFAVSVWVKAEKKGGFLYAFVNSLSPGATEYQYVYGDTTTNNLTVANMMTHYYSTGG
                     STYKFFQVGVRDMAGEWTHLVLVQDHTSTALYVNDVKASTESLDPLSISYAGGGLIGA
                     MPGQDLGHFNGDIDELRFYDRALTAAEIQRLYNE"
     gene            complement(4444..5331)
                     /gene="bla"
                     /locus_tag="VEV83_06235"
     CDS             complement(4444..5331)
                     /gene="bla"
                     /locus_tag="VEV83_06235"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subclass B3 metallo-beta-lactamase"
                     /protein_id="HYK44743.1"
                     /translation="MNFHRIRTRFRTVLVVFAFSMILSAVKAQTVHEPNITNPDWVKP
                     YPPFRIAGNLYYVGTYDLGCYLITTSQGNILVNTGVASSAEQIKQNIETLGFKFSNTR
                     ILLTTQVHFDHVGAMAEIKSQTGAQMMVDEADAAVLADGGNSDFAFGGARLFEPVQAD
                     RLLKDGDTVQLGDMRMIMLHHPGHTKGSCSFLFTINDEQGSYRVLIANMPTIVVNKRF
                     VDVADYPRISKDFAYTLHAMKSIHFDIWLASHASQFNLHDKHKPGDAYNPAAFVDQKG
                     YEAALSDLEKQYDEKISKE"
     gene            5554..6054
                     /locus_tag="VEV83_06240"
     CDS             5554..6054
                     /locus_tag="VEV83_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK44744.1"
                     /translation="MDRQAAEKEFESHIKEHELLLHKVCCMYAYNNTDRQDLFQEIVI
                     QLWKAFPKFKGDAKISTWMYRIAINTAITGLRKTKKLITSYEPHTIPEHAVDEATSLR
                     KEEQVKQLYNAIDRLNQVEKAIVMLYMEDRSYEDMEEILGINQGNLRVKMNRIKDKLK
                     QLTKNI"
     gene            6057..6653
                     /locus_tag="VEV83_06245"
     CDS             6057..6653
                     /locus_tag="VEV83_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44745.1"
                     /translation="MELDDLKKTWQENPIQKPQNKNIMEMIMHKSYGPLAALRRSYLK
                     QILVMALMPFLLLLTNADNIQAPLTSILFWSYVALCIGVISFSFYDYRIVDRMQGMDK
                     VVKQSLQHQIAILETRLRWKIMGLRIALLFLIVLTEIVPYFQHYAVLDKWHSLPLLTR
                     FGCYAALIVAQYFLSPLVLHRKFGRHLEYLKNLANELE"
     gene            complement(6715..7437)
                     /locus_tag="VEV83_06250"
     CDS             complement(6715..7437)
                     /locus_tag="VEV83_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44746.1"
                     /translation="MVFKNVFISLLLLLFLNSGRGQTAETIISKYIEHIGGEQKWSTI
                     KTMVVSGNYNYGGMVFPFKSFSKTPNLYRYIVMSNGKSFQQAFDGLKGWKIDGFKNET
                     KKTILTGKSASAMANEADVEIESPLINYKEKGHTAIFEGQDTVDRQQCFKIEFITHDG
                     DTSRYFFSIANFELLKKQSISKNEELDSSLVDIFYSDYREINGIRIAYNTVCKVGDQT
                     ILTITFDNVTFNQPISDDEFKP"
     gene            7616..8098
                     /locus_tag="VEV83_06255"
     CDS             7616..8098
                     /locus_tag="VEV83_06255"
                     /inference="COORDINATES: protein motif:HMM:NF013209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HYK44747.1"
                     /translation="MASPAKERSEKQLSETVEKMGIMIEKMGHAPVPGRIVSYLMLSE
                     PPYRDFYQIQAFLKASKSTISTALNQLMQAGVVNYITFSGDRKRYFQIDTQGLKNVMK
                     DQYKQGRLLNDMIGQTLEHRKNSEFPRFSRELKEVIDFSTHIHTGIEKLIADWEKAHK
                     "
     gene            8207..9247
                     /locus_tag="VEV83_06260"
     CDS             8207..9247
                     /locus_tag="VEV83_06260"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK44748.1"
                     /translation="MKNRRQFLKTSAAAAASTLFLKKLFASPAVANSFSQRPSSDQLS
                     FQISLAEFSFAGELMSGKMTNMEFPARAKNEFDIDVLEYVSGFFNNKHTDQAYLKELK
                     QRCDDLGMKNHMIMIDGANIADLDATKRKQAVESHYAWVNAAKFLGCDKIRVNLGDTM
                     KAVNGDTDDPADEAAKSAADGYRQLLEYAARQNMMVIVENHFGNSTDIDWLVGVIKAV
                     DMPNSGLLPDFGNFCRQRSKPTEPGIKGMMNTTCIKQYDPYDGVKKMMPYAKGISAKS
                     HKFDANGNESEIDYLRMFQIIKEAGFQGYVGIEYEGGFMNMFNPAGGYVPSSEGIKLT
                     KNLLEMVRKQLA"
     gene            9287..9661
                     /locus_tag="VEV83_06265"
     CDS             9287..9661
                     /locus_tag="VEV83_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44749.1"
                     /translation="MKKMKSALIAFVLVAVTFAAKAQTSTAAYFAGKWNVLLKGTPDG
                     DHKMVFIIQNNSDSLSGSVQDSTGAELSKFTSIEQKENEITVYFNAQGYDVNVVLDKK
                     DDDHATGNLMGMFDVDAERIKE"
BASE COUNT         2886 a         1995 c         2200 g         2588 t
ORIGIN      
        1 tgctgaacgg cattacaaaa tattgatggc gggtgttgat caatttggcg ggaataacgt
       61 cgcaggtccc gtcctcgaag cgtatcaaat gggagtgaaa gaacatggcg aggcgtggat
      121 gcgtcaacgt tttgaacaat cagcggtccg actgcttcgc aatattttcc gggtagggct
      181 tttcgaaaat ccttatctcg atccgcagca atcagtacaa attgttggta atgcagattt
      241 catgaaagca ggttatgatg cgcagttgaa atcgatcgtg atgttgaaaa ataaaggcaa
      301 tgtgctgccc cttgagcaaa catccgcagg atctggtgga aaaactgttt acataccgaa
      361 acgtgttgtg cccgccgcaa gagatttttt tggaaatgtt actcctgagc gaattgaata
      421 ccccgtaaat gttgaggttg tgaagaagta ttttaatgta acggatgatc catccaaagc
      481 agatgttgct atcgtttttg tgaaaggccc gaacagtggt gtcggttata gtaaagacga
      541 cagacaaaac ggaggcaatg gttatgttcc tatcagttta cagtatggtc catacacagc
      601 gacagatgca agagatgcaa gcattgctgc gggcgatccg gttgttgatc caacgataac
      661 caatcgttct tataaaggca agactgtctc tgcaaataat gtaaccgatc tcaagttgat
      721 cctcgacacg aagacagcga tgaatggaaa acctgtgatc gtatgcatgg gattaacgaa
      781 tcctgcggtc gttgcagagt ttgaatcgca ggtccagggg attgttgttt catttggtgt
      841 gcaggaccag gcgttgatgg atattatttc aggcaaagct gaaccatcag ggttgctgcc
      901 gctgcaaatg ccggcaaata tggaaaccgt cgagcaacaa aaagaagatg tgccgcagga
      961 tatgaaacca tacacagaca acgaaggcca tacttatgat tttgcttatg gcctcaactg
     1021 gaaaggtgtg atcaacgatg caaggacagc gaagtacaaa aagaaataaa tatttattct
     1081 ctgcttgacg caaattgtca tcgcagttgg tctatatgat gccttcacga gcgacatcat
     1141 tcacgaaaca taaatgcaaa attttgcatc tcaatttttc tgattcacac aaatatcacg
     1201 aaccttcaaa tatctttcta tcggcagtcg gatagacttc gcgtctcttc aagcaaagcg
     1261 gctgcctgct tgagtttcgt gtgagtaggt ttaaaatatg ttgataacac agcatcgggc
     1321 tttttattct cctttcctat attgcattca gtaaaacaca ttaccggatt gtaaaagcta
     1381 agcgaaacac cgttacgatt ctagcttttt ttttcatctc tgcttcttgc aattactcat
     1441 ggcatatctc aaactcaaac aatacacaac aaaaacagac caccatgaaa aatcaactac
     1501 tcagcattgc cttcgtaatt tttattgtga atgcacacgg gcaaaacctt cttcacgcga
     1561 tgcagggaga acgcggtgtc gccaaacagt atgcagaatt tgctgcgcag gagcagccgg
     1621 tcttcaatga gaaaaatgct gcttctattc ttggcctcga caaaaattcc ggcctcgttt
     1681 tgtccagtat agaaacggat cgacttggct tcacccattt ccgtttttat caaacgtaca
     1741 acggcattgc gattgacaag acgatgctcg ttgcacatgt aaaagacggc aaacttattt
     1801 cggtaagtgc ggcgctggtt accgatttta attcagcaat gaagtcaggc actgccacac
     1861 aaaaaataac aacagcggat gcaataggaa gggctgttgc gcacgtgcat gcattgcgtt
     1921 atgcgtggca ggacaagaat atggaagccg cacttaagga acaaacaaga aacgtgacgg
     1981 ccacgtatta tccgaacgca aaaaaagttt ggtacaacgc cggcgatcaa ctcgatcctg
     2041 caacactgca tcttgcttat aaaattgacg tgtatgcaga acaaccggaa agccgcgcat
     2101 tttattttgt cgatgcaaac agcggcgaga taatcgggcg tgaagagagg atacattcca
     2161 cgaatgcagt tggcaacgcg aacacgctgt atagtggaac ccgaactgta caatcagaac
     2221 agatggcggc aaactcatat cgattaagag atcataatcg tggaaatggc atcatcacct
     2281 taaacgctga taaaacagat atcacaaaca cttcatttga ctgggatctt actttgcccg
     2341 gaaaaaacgg gcttgatgcg cattggggtg ttgaaatgac atatgattac tacaaaataa
     2401 attttaaccg gaacagtatt gacaataatg gttacgccct ttacagctac ataaacaaag
     2461 gcggatttct ttacagcgac aatgcttcat gggatggcaa tgcaatgaac tttggtacca
     2521 ggtcaaactc ggacggcgcc ggcgttacag gcatagatgt tacaggccat gaattaacac
     2581 acggagttac gcaatttacc tgcaatctca attacagtaa ggaacccgga gcgatcaatg
     2641 aaagcatcag cgacatcatg ggcaagtctg tacaattttt tgcaaagccg gcagataaag
     2701 actggaggct tagtaatgac atgaattggt ttattcgtga tatgagcaac ccgaatgcat
     2761 acgcgcagcc agatacatac ggaggagata aatggctcgg tggtggattt aattatttgc
     2821 tggacaatgg tggcgtacat acgaacagcg gcgtcggcaa ttttatgttc tacctgttgg
     2881 tcgatggcgg atcaggaacg aatgacattg gaaatgccta caaagtgcag ggaatcgggc
     2941 ttagtaaagc ggaccagatc atttatcgct cgcaaaccgt ttacctcgtg cctacatcgc
     3001 aattcacaga ttggcgcaca gcatgcataa atgccgcacg cgacttatat ggaaaaggct
     3061 caaacgaatt gaaacaggtg aagaatgcgt tttatgcagt cggcataggc acaggagcag
     3121 tagccacggc cgttgcaaca aatcaaattg tttcggtaac accaaatccc gttcacggaa
     3181 taaatgcggt cgccaaattt gacctgcaat ctgccggata cgtcgtaatg aaattatacg
     3241 acggctctgc gcaagttttg catgtgtata atattggaac cagagaaaag ggtgaacaat
     3301 cttttacgct gccgggaact gcagaattaa aagaaggcaa ttattatatc acgatcgaaa
     3361 acgatggtgt tgcgattggt cgtggaaaat ttttggtgat taactaaaat aatgaaaggc
     3421 cgtgcaaagt tgcggccttt catttcttta tttcccagca ggttttcatt gaagtcgtaa
     3481 acatgatggc aaggcaatgt ttgtaagaat tatgaacgca aagaatttct ctactctgaa
     3541 gaaaaatatt ttatagttgt gcgaactctc cgttattcgt tataaagtct ttgaatttcg
     3601 gccgctgtta aggcgcgatc atagaaccta agttcatcaa tgtcgccatt aaaatggccc
     3661 aaatcctggc ccggcatcgc gccgatcaaa ccacctcccg cataacttat ggacaacggg
     3721 tccaaacttt cagtgcttgc ttttacatca ttaacataca aagcagtgct tgtgtgatcc
     3781 tggaccaaaa ctaaatgcgt ccactcgccg gccatgtcgc gaactccgac ctgaaaaaat
     3841 ttgtaagtgc ttccacctgt ggaataataa tgcgtcatca tgtttgcaac ggtgagattg
     3901 tttgttgtcg tatccccata cacgtactgg tattcggtcg cccccggtga gaggctgtta
     3961 acgaaagcat acaggaagcc tccttttttt tcggctttta cccataccga cacagcgaaa
     4021 gttggcaggc tgtccgttcc ggcaaatgct ggaacgtcca ttgttgcatc gatgccgtta
     4081 aaatggtaag ctttatttgc agagccgttc ctgtcatttg tgagcgctgc agcgtggacc
     4141 gtcagatcaa aattattacc gcttgcatca ttagcgttgc cagtgaacgg atagtaagca
     4201 atgagtccac tgtcaagtga atcaggcggc gggggtgggg gcggaggtgg aggcgtggaa
     4261 gagccggatt tcgaacagcc tgaaaaaatg acaacacaga acaaaatagt aaaggcagtt
     4321 agttgtttca tacaaaggat ttagaaaaaa aatgcttctg agcggcgaag atagcggccg
     4381 ctgtaaagcg taacaaaaat agttgctttg catgatgaca tttgcaatgg cgacccgggg
     4441 aaattattct ttgctgattt tttcgtcata ttgtttctcc agatcggaca gagcagcctc
     4501 atatcctttt tgatcgacaa atgccgcggg attgtatgca tcaccaggtt tgtgtttatc
     4561 gtgcaggttg aattgactgg catgcgatgc aagccatatg tcgaagtgga tgctcttcat
     4621 ggcatgtaat gtatacgcaa aatcttttga gatcctggga taatccgcaa catcaacaaa
     4681 ccgtttattc actacgatag tgggcatgtt cgcgataagc acacgataag atccttgttc
     4741 atcatttatt gtaaacagga aactgcatga accttttgta tggccgggat gatgcagcat
     4801 gatcatccgc atgtctccaa gttgaacagt atctccgtct ttcaacaacc tgtcagcctg
     4861 gacaggttca aacaggcggg cgccgccgaa tgcaaagtca gaattgccgc catcagccaa
     4921 aactgccgcg tctgcttcgt caaccatcat ctgtgcccct gtttggcttt ttatttccgc
     4981 catcgcgcct acgtgatcga aatgcacctg agtcgtgagc aatattctgg tattgctgaa
     5041 tttgaaaccc agcgtttcaa tgttttgttt gatttgctcc gcggatgatg caacgcccgt
     5101 attcacgagg atgttgcctt gtgatgttgt tataagataa catcccagat cgtaagtgcc
     5161 aacataatac aaattacccg cgatcctgaa aggtggataa ggtttgaccc aatcggggtt
     5221 tgttatattt ggctcatgaa ctgtttgtgc tttcactgcc gataatatca tcgaaaaagc
     5281 aaaaacgacg agaacggttc gaaagcgcgt gcggatacga tgaaaattca tgtggcatca
     5341 aatgtatttt gaaaaaaatt agtgcaggaa ttttcgtttt gaattgcgtc tttcttcacc
     5401 gtttaacgag cattcttttt attttttcct ttttttgttt cctatttgtg gcattgcgtc
     5461 tgcctcttcc attgaaagcg tccttattta aaaaatattt tcctttcgtt gtaacaaaac
     5521 ttacgaagtt gcgacaagta taaaaagcag gtattggaca ggcaagcggc agaaaaagaa
     5581 ttcgagtctc atataaaaga acatgaacta ctgctgcaca aggtttgttg catgtatgcg
     5641 tacaacaaca cggatcggca ggaccttttc caggaaatcg tgatacagct ttggaaagct
     5701 ttcccaaaat tcaaaggcga cgcaaagatc agcacgtgga tgtaccggat cgctatcaat
     5761 actgcgatca ccgggttacg taagacgaag aaattgatca cttcttatga accccacacg
     5821 atacccgagc atgctgttga tgaagcaaca agtttgcgaa aggaagaaca ggtgaagcag
     5881 ttgtacaatg cgatcgacag gctaaaccag gtagaaaaag cgatcgtgat gctttatatg
     5941 gaggaccgct cttacgaaga catggaagag atattgggta ttaaccaggg aaatttacgg
     6001 gtgaagatga atcgcataaa agacaaattg aaacaactga caaaaaatat ttgaccatgg
     6061 aactggatga cttgaaaaaa acatggcagg aaaacccaat tcaaaaaccc caaaataaaa
     6121 acataatgga aatgatcatg cacaaaagct acgggccttt ggccgcttta agacgttctt
     6181 acctcaagca gatcttagtg atggctttaa tgccattcct gcttctgctt accaacgcag
     6241 ataatataca ggcgccttta acgagcatac tcttctggag ttatgttgct ctttgcatag
     6301 gcgttatttc gttttcgttt tacgattacc ggatcgtgga caggatgcag ggcatggaca
     6361 aggtagttaa gcaaagcctt caacatcaaa ttgccatact tgaaacaagg cttcgctgga
     6421 agatcatggg gctgcgaatt gcgcttttgt ttcttattgt tttaacggag atcgtcccgt
     6481 attttcaaca ctatgctgtg ctcgataaat ggcattcgct tccgctgctt accaggtttg
     6541 gctgttatgc tgcgcttatc gttgcgcaat attttcttag tccgttagta ttgcaccgga
     6601 aattcggcag gcatttggag tatttgaaaa acctggcgaa tgaattagag tagcctgtaa
     6661 cagaagcgat gcgcaaacaa aatgtcttga tcgtcttaaa acgtatagaa ttgatcacgg
     6721 tttaaattcg tcgtcggaga tcggttggtt gaaagtcacg ttatcaaaag ttatcgtcaa
     6781 tatggtttga tctccaacct tacagacggt gttgtaagcg atcctgatcc catttatctc
     6841 ccggtagtct gaataaaaaa tatcaaccag gctgctatca agttcttcat ttttcgagat
     6901 tgattgtttt ttcagtaatt caaaattcgc gatgctgaaa aaatatctgc tcgtatcacc
     6961 atcatgggtg atgaattcta ttttgaagca ttgttggcgg tcaacagtat cctgtccttc
     7021 aaatatcgct gtgtgtcctt tctctttgta gttgattaaa gggctttcga tctcaacgtc
     7081 cgcttcattt gccatggcac tggcgctttt gccggtaaga attgtttttt ttgtctcatt
     7141 cttaaaacca tcgattttcc atcctttaag gccatcaaaa gcctgttgga aagatttccc
     7201 gttactcatt acaatgtatc tgtaaaggtt gggtgttttt gaaaaggact tgaaagggaa
     7261 caccatgccg ccataattgt aatttcctga gacgaccatc gtttttattg tactccattt
     7321 ttgttcgccg ccaatgtgct ctatgtattt tgaaatgatc gtctctgccg tctgcccacg
     7381 accgctgttt aaaaataaaa gcagcaacaa agaaatgaat acgttcttga agaccatctc
     7441 cgttttttga acaaaagtaa aattagattg attaacagaa tcctggctgc tgttccctgc
     7501 ggaaacggcc gtaagcgtag cttagaaagc gggcagaaat attttttaaa aaaagttggt
     7561 tcttttttcg tcgaaccaaa aaaaccattt agtttcgctg ccgcaaatcg aaagaatggc
     7621 atcacccgca aaagagagat ccgaaaagca gctttcagaa acagtggaaa aaatgggtat
     7681 tatgatcgaa aagatgggac atgcgcctgt tcccggaagg atagtttctt atctgatgct
     7741 ttcggaaccg ccttaccgcg atttttatca gatccaggca ttcctgaagg cgagcaaaag
     7801 cacgatcagc acagcactca accagttgat gcaggcggga gttgttaatt acatcacctt
     7861 cagcggcgac cggaagcgtt actttcagat cgatacccag gggcttaaga acgtcatgaa
     7921 agatcaatac aagcaagggc ggttattgaa tgatatgata ggtcaaacac ttgaacatcg
     7981 gaaaaattcc gagtttccga ggtttagccg cgagctgaag gaggtgatag actttagcac
     8041 gcatattcat accggcatag aaaagctgat tgcagactgg gaaaaggcac acaaataatt
     8101 tttttataaa cttggttctt ttggtttcga actataaatg aaatgaaaaa agttggtacc
     8161 cttatgaaat tatttcgctt acttgattta acgaaatcat gttgatatga aaaacagaag
     8221 acaatttttg aagacgtcgg cagcagccgc ggcgagtaca ttgtttttga agaagctctt
     8281 tgcatcacca gccgttgcca atagtttcag ccagcggccg tcttcagatc aattgtcatt
     8341 tcagatttca ttggctgagt tctcctttgc gggggagttg atgtcgggca aaatgacaaa
     8401 catggagttt ccggcaagag ccaaaaatga gtttgacatc gacgtgctcg aatacgtttc
     8461 cggctttttt aacaacaaac acactgacca ggcctacctc aaagaattga aacagcgttg
     8521 tgatgactta ggtatgaaaa accatatgat catgatcgac ggcgcaaaca ttgcagacct
     8581 ggacgcaacg aaaagaaaac aggctgtcga atcgcattat gcgtgggtca atgcagccaa
     8641 gttcctcggg tgtgataaga tacgcgtgaa tttaggagat accatgaaag ccgtgaacgg
     8701 tgacactgat gatcctgccg acgaagcagc gaaatctgca gccgatggat accgtcaact
     8761 gcttgaatat gcagccaggc aaaatatgat ggtgatcgtc gagaatcatt ttggaaattc
     8821 tacagatatc gattggttag ttggagtaat taaagcggta gacatgccta attccggtct
     8881 gctgcctgac tttggaaatt tctgccgcca gcgcagcaaa cctaccgaac ccgggataaa
     8941 aggaatgatg aacacaacgt gcataaagca atacgatccg tatgatggcg tgaaaaaaat
     9001 gatgccttac gcaaagggca ttagtgccaa atcacacaag tttgacgcaa atgggaatga
     9061 aagcgaaatc gattatctcc gcatgttcca aattattaaa gaagccggtt tccagggata
     9121 tgttggtatt gagtatgaag gcggtttcat gaatatgttc aacccggccg gaggatatgt
     9181 tccgagcagc gaaggaataa agctcacgaa gaacctactt gaaatggttc gcaaacaact
     9241 tgcttaagct tcttttcata aatcacaaac attcaaatca attaaaatga aaaaaatgaa
     9301 atcggctctc atcgcttttg tcctcgtggc tgttacattc gctgcaaagg cacaaacatc
     9361 aaccgcggca tacttcgcag gtaaatggaa cgtgttactt aaaggcactc cggatggaga
     9421 ccataagatg gttttcatta tccagaacaa cagcgattca ctttcaggat ctgtgcagga
     9481 ctcaactggt gcagaactct ctaagttcac aagcattgag caaaaggaaa atgagatcac
     9541 tgtttacttc aacgcacagg gttatgatgt aaatgtcgta ctcgataaaa aagacgatga
     9601 tcatgcaaca ggaaatttga tgggcatgtt cgatgtagac gccgaacgca tcaaagaata
     9661 ataaatcct
//
LOCUS       DASQJI010000212         5360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2938025,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000212 DASQJI010000000
VERSION     DASQJI010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2938025"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VEV83_06270"
     CDS             complement(<1..333)
                     /locus_tag="VEV83_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44750.1"
                     /translation="MKSLSYRLFTAALLLLTSATNGQKTVNKWNWDSIAWYEQNNKPC
                     GIEFHSTPFTISKVGTEPTNAPGTAGEATVEPSHDCLNYCPVHNGSVVCELVAEDHCP
                     MNGYWHTNK"
     gene            complement(1056..1577)
                     /locus_tag="VEV83_06275"
     CDS             complement(1056..1577)
                     /locus_tag="VEV83_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44751.1"
                     /translation="MELLGIGSRVKHPSYGIGVVIRLNKKAYDICFIEHGIQSVRKDF
                     ELEVISKVEPEYNVSFSEAEDALIKILREWSDISEIVPLGEKWKQGVMILRPFDPSLK
                     EKEIPIEVFFHKIVMLRDRLRVMEQRINAHKVLTDEDKIDLQQYITRIYGSLTTFNVL
                     FKHQFDQFVGDKM"
     gene            complement(1730..3658)
                     /locus_tag="VEV83_06280"
     CDS             complement(1730..3658)
                     /locus_tag="VEV83_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK44752.1"
                     /translation="MATTRQLAAIMFTDMVGYTSLMQTNEELATKKRDRHKMVLDDTI
                     NKFRGKILQYYGDGTLSIFNSAADGVNCAIEIQTRLSEEPKVDLRIGIHTGDIILDDE
                     GVYGDGVNIASRIESLSVSGGVFISEKVYDDIKNQEHISTREIGSFELKNVKQPVRVF
                     AISNAGFPVPSRSEVRGKLNQPTNRLAVLPFENFSADPENEYFSDGVTEELINSFTKV
                     EGLLVTSRTSSFAFKKKHEDAREIGSKLNVDKILEGSVRKAGNRVRITAQLINSADGY
                     HLWSETFDRDLNDIFEVQDEIARIIVNKLRESIAEKPKDESFVKQATENIDAYSLYLK
                     GVYFRNKLTPPDVRRAIEYFEEAMKLDPQFAMAPAHFAGCYIQLGATGQMIPDKAFQV
                     AHRYADIAIGLDSTLAEAYVVKGAAYLFYDWKWDEGYKYITRGLQLNPASSFASFVMA
                     MYHHYFGRLNQAIEVLEKAMLHDPLSIFIMSGLSEKYFHARRYDDAITYAEKVLELDP
                     NMRQALEIKGFSLGMKGHWNEAIEIFKKVHELTNHPLRGLAPLAYGYARAGETAKAKE
                     CISKIEQRQVEEPEAIVDGDIAFVWWALGDADKTFDYLFRALDKRMPVAPYVIYSPLH
                     EGIEKDPRVAELKRRMNL"
     gene            complement(3941..5086)
                     /locus_tag="VEV83_06285"
     CDS             complement(3941..5086)
                     /locus_tag="VEV83_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK44753.1"
                     /translation="MNITLSANSRTHRIAVSVFFFLAGITVSSWASRIPDIKEKLQLS
                     EAALGGVLFALPVGQLVSLPLSGWLISRFGSRQLVTAAAILFPLTLILLGCATAIWQL
                     IAVLFFFGLWANLLNISMNTQAVGVEHLYGRSIMASFHGLWSLAGFCGAAVGNFFVSA
                     NLSPLVHFAVIALAALLMVATSSRHALPDDDRKKNSQRFFVKPDKSVLLLGLIAFCCM
                     LCEGSMADWSGVYFQKVVHAPARLTTLGYVAFMGTMATGRFFGDKLITRFGVKNILQV
                     SGILIGAGLMTIVVFPYLASAVGGCLLVGFGVSCVVPMVYALAGKSKTMSPGVALAAV
                     STISFIGFLVGPPVIGFIAQLAGMRWSFTLIAVLGLGTAVLGSRIRK"
BASE COUNT         1386 a         1273 c         1094 g         1607 t
ORIGIN      
        1 cttatttgtg tgccagtaac cattcatcgg gcaatggtct tctgcgacca actcgcatac
       61 tactgatcca ttgtgcaccg ggcaataatt caggcaatcg tgtgatggct ctaccgttgc
      121 ttcgccggcc gttccgggtg catttgtggg ttccgtcccg acttttgata ttgtgaaagg
      181 agtgctgtga aactcaattc cgcacggctt attattttgc tcataccatg caatactgtc
      241 ccaattccat ttattcacgg ttttttgacc attggttgca ctcgtaagaa gtaacagggc
      301 tgccgtgaac aatctgtatg atagactttt cattcgttta aatttttaat gatgtactat
      361 ttagtcgtga agcaactcga aaatggaaac accttaaaaa agtttgatgt ttggagtttg
      421 aggtttgagg ttcgaagttt cgcagacctc acgatgtttt caatgttgat ttgttcgatc
      481 atcaatcttg atggtggaga cacttgctga agcaatctta ggaatcttca tttcgtaatt
      541 ttatatcatg atcgtcgggt gatcaagatt tcaaagcatt taagggagat gttgacgtga
      601 agtaggagga acgttattgg gatactgcgc tattggggta ttgggatact gggatatcgg
      661 gcgttggtaa ttcagcggtc ggtattcatc aaaccctttt cgaagaaaga agtatcgaaa
      721 caccagcttg tttcattcgg cggtctggct tttttgaatt cccggtttcg aattcagcat
      781 gaccctttgt tgacttgttt atttgttctt gaaatttgct tcttttagat tttgttcttg
      841 atgatcgctt ctttgagttt ggtttttctt ttttgcttct tgtaatttgc ttcttgtaat
      901 ttggttcttg taatttggtt cttgttattt ggttcttgtt atttggttct tgttatttgg
      961 ttcttgtaat ttgcttcttg ttatttggtt cttgttattt ggttcttgaa acttgtttct
     1021 tgttatttga ttcttgaaac ttaatacctc ccccctcaca tcttgtctcc tacaaactgg
     1081 tcaaactggt gtttgaataa gacattgaac gtggtgaggc ttccatatat gcgcgtgatg
     1141 tattgctgca gatcgatctt gtcttcatcg gtaagaactt tatgcgcatt gatgcgctgt
     1201 tccattaccc gcagcctgtc tcgcaacatc acgatcttat gaaaaaacac ttcgatcggt
     1261 atttcttttt ccttcagtga tggatcaaac ggacggagga tcatcacacc ctgtttccat
     1321 ttctcaccga gcggaacgat ctctgagata tcactccatt ctctcaaaat ttttatcagc
     1381 gcgtcctccg cttcactgaa actaacattg tactccggtt ctactttgct gatcacttcc
     1441 aattcaaaat cttttcttac tgattggatg ccatgttcga taaaacaaat gtcatacgct
     1501 tttttattta agcgaataac caccccaatc ccataggaag gatgcttgac cctggaaccg
     1561 atacccaata attccatatt ctaagatttt ggcataaaaa tatgatggcg aaagaaattt
     1621 catttaaaaa gatagatctt gttgttcttt catttaactg cctaaaaaaa acagcagttg
     1681 atatgtgctt gtcgaagaac gtttgcaacc gagctcgcgc acaattactt tataaattca
     1741 tccttctctt cagttcagct acccgcgggt ccttttcaat tccctcgtgc agcggtgaat
     1801 aaataacata cggcgccact ggcatccgtt tatcgagcgc gcgaaataaa tagtcaaatg
     1861 ttttgtcggc atcgccgagt gcccaccaaa caaatgcgat gtcgccgtcg acgatcgctt
     1921 ccggttcttc cacctgccgt tgctcgatct tgctaataca ttcttttgct tttgccgttt
     1981 cacctgcacg ggcataacca taagcgagcg gtgcgagtcc gcgcaacgga tgattcgtca
     2041 attcatgaac ttttttgaaa atttcgatcg cctcattcca atgtcccttc atacccaaac
     2101 taaatccttt gatctccaaa gcttgccgca tgtttggatc gagctcaaga actttctctg
     2161 cgtacgtgat agcatcgtca taacggcgcg catgaaaata cttctcagaa agtccgctca
     2221 tgataaagat cgacaaggga tcgtgcaaca tcgctttctc aagcacttcg atcgcctggt
     2281 tcaaccttcc aaaataatga tgatacatcg ccattacaaa ggaagcaaaa ctggacgcag
     2341 ggtttaattg caaaccacgg gtgatgtatt tgtaaccttc atcccatttc cagtcataga
     2401 ataaatacgc tgctcctttt acaacatagg cttctgctaa cgtgctgtca agtccaattg
     2461 cgatatccgc ataacgatgt gcaacctgga aagctttgtc cggaatcatc tgcccggttg
     2521 caccgagttg aatatagcac cctgcgaaat gcgcgggtgc cattgcaaac tgcgggtcca
     2581 gcttcatcgc ctcttcaaaa tattcaatcg cccttcgaac atcaggtggt gtcagcttat
     2641 tcctgaaata aacaccttta aggtacagcg aataggcgtc gatattttct gtagcctgct
     2701 tcacgaatga ttcgtccttt ggcttttctg caatcgattc gcgcaacttg tttacgatga
     2761 tccgcgcgat ctcatcctgc acctcgaaaa tatcattaag gtcgcgatca aacgtttcgc
     2821 tccataaatg atagccgtca gccgaattga tcaactgggc ggttatgcgc acacggttac
     2881 ctgctttacg cacgctgcct tcaaggatct tgtcgacatt taatttgctc cctatctcgc
     2941 gcgcatcctc gtgtttcttc ttgaacgcaa aagaagacgt gcgtgatgta accagcaatc
     3001 cttccacctt tgtaaatgaa ttgatcaact cctcggttac gccgtcgctg aaatattcat
     3061 tctccgggtc cgcgctgaaa ttctcaaacg gcaggactgc aagcctgttg gtaggctgat
     3121 tcaattttcc tcttacttca ctacgcgagg ggaccgggaa gcccgcattt gaaatagcga
     3181 acacacgaac cggttgcttt acatttttta attcgaagct cccgatctca cgggttgaaa
     3241 tgtgttcctg gttcttgata tcgtcataca ctttttccga aataaaaaca ccacccgata
     3301 ctgacaacga ttcaatccgt gatgcgatgt tcacgccatc accgtaaact ccctcgtcat
     3361 ccagtatgat atcacccgta tgaattccaa tgcgaaggtc cactttcggt tcttccgaca
     3421 gcctggtttg tatttcgatc gcgcaattaa ctccgtctgc agcactatta aaaatgctta
     3481 gcgtgccgtc accgtaatat tgaagaattt ttcctctaaa cttattgatc gtatcgtcca
     3541 gcaccatttt gtgccggtct cttttttttg tagcaagttc ttcatttgtt tgcatgagag
     3601 aagtgtaacc aaccatgtcg gtgaacataa tagctgctag ctgacgtgtc gtggccatgc
     3661 ttcttattag gggcactaaa ttaaaacaaa tgcctgcgat gtgtttggtt ctccggattt
     3721 cattccggag ctaatcatat gttgacccct tccggcccac ggtgtgtaca tcgaacattg
     3781 cgcatttgac tattttaaat gcaagcgcta gctcggcacg aatcgaacat gcacataaaa
     3841 aaagccggaa aacatgcatc cagcttctta tcgaactttt gaactttaaa tcgctactga
     3901 caattcgcaa ttgacaattc accattgaca attcacaaaa tcatttcctg atcctgctgc
     3961 ccaacaccgc tgtgcccaaa cccagcactg cgatgagcgt gaatgaccat cgcattccgg
     4021 ccagttgtgc aatgaaacca ataaccggcg gcccaaccag gaaaccaatg aagctaattg
     4081 tggacactgc tgccagcgct acgccgggtg acattgtctt cgattttcct gcgagtgcgt
     4141 ataccatcgg cacgacacat gacacaccaa atcctacaag caaacatcct ccaactgcag
     4201 aagcgaggta tggaaacaca acgatggtca taagtcctgc tccgatcaaa attccgctta
     4261 cctgcaaaat atttttcacg ccgaatcttg tgatcagctt gtcgccgaaa aatcttccgg
     4321 tagccatcgt gcccataaat gccacatatc cgagtgttgt taaacgggcc ggtgcatgaa
     4381 ctactttttg aaaatatacg ccgctccaat cggccatgct gccctcgcat aacatgcaac
     4441 aaaacgcgat gaggcctaac aacaaaacgc ttttgtccgg ctttacaaaa aaccgctgcg
     4501 aatttttttt gcgatcatcg tctggcaatg catgcctgga tgaagtcgcc accatgagga
     4561 gtgcagccag cgcaatcacc gcaaaatgca cgagtggtga gagattggct gaaacaaaaa
     4621 agttgccgac cgcagcacca caaaatccgg ctaagctcca cagcccgtga aatgaagcca
     4681 tgatagatct gccatacaaa tgttcgacac caacagcctg ggtgttcatg gaaatgttga
     4741 gcaagtttgc ccataatcca aaaaagaaca agacagcgat caactgccat attgctgttg
     4801 cacatccgag cagaatcagc gtgagcggaa aaagtattgc cgcggcagta acaagttgcc
     4861 tgcttccaaa cctcgaaatt aaccagcctg aaagtggaag actcacgagt tgtccaacgg
     4921 gtagcgcaaa caaaactccg ccaagcgcag cttcgctgag ttgcaatttt tctttgatgt
     4981 ccggtatcct gctggcccag cttgaaacgg tgataccagc gaggaagaaa aaaacactca
     5041 ctgcgattcg gtgggtcctg ctgtttgcag agagagttat attcataaaa aaatatttca
     5101 ttattagaac cgcataggca catagatcat aggctttgca tcgctctatg tgtttctctc
     5161 atgtcctatc tgcctgcgtg attccggtta ctaaattttg tatactgatt tgaagtccta
     5221 ggcagctttt accgctgcac aatctgtagt ctttccttag atagtggtaa ttcttttttt
     5281 tgattttctg aaacaggagg ttcaattgaa taatctttat tcatgtggag agaagtgaac
     5341 acaaagtcgg cagtacttct
//
LOCUS       DASQJI010000213         6206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_327718,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000213 DASQJI010000000
VERSION     DASQJI010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6206
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327718"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VEV83_06290"
     CDS             complement(<1..590)
                     /locus_tag="VEV83_06290"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HYK44754.1"
                     /translation="MQAKVRIVVPVFCAVLIYSCSSTSDLYKSEKLSDNNFKNYKTYA
                     FMPTNDTAYTKMIDRKPFERMLGIAVKEELDKRGMRLDTANPDCLFTYTLKMNRNYEV
                     SQGEYMEYKPEVYQPAFDNHARIYTFSSENKPVVYAGNLSVDTLREGSMLIDMIDIKE
                     NKVIWRSTAEGKRPETYQQPSQATVDKIVKTMFKTFP"
     gene            811..>6206
                     /locus_tag="VEV83_06295"
     CDS             811..>6206
                     /locus_tag="VEV83_06295"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HYK44755.1"
                     /translation="MLNKKFRHPRNVTCQCLVIAFGFVFFLQPLFTNGQGNAEKGLPF
                     VNNYSPKTFKAYPQIFSEIQDDNGLMYFGNQNYILQYDGVIWRKIDCSNGGQVAVRAM
                     GKNKKGLIYYGAIGNFGYLSADSSTGQMKATPLLKYIPDSLRAFNDIWSVYVTDRGVY
                     FQARERIFRLQEDSSGKITGELKTWEPKTRFMYAFYLDGVYYVHQQALGLFKMVNDSL
                     ELIPGSEFLGSERMQVMLPYDDNKNEKKYLLGMFYSGCYLFDGKQFTKFTIQADSLLS
                     STLYRGAVLQDGNYALALAGKGLLVIDKAGRTLNLINRATGLQDESVYSVYPDRQGNV
                     WLGLDNGISRIETGSPLTQFGVQSGITTAVLSVCRFGGVIYVGTTNGMRRLNETTGIF
                     DPIKEIATNQVFTLQPDNDQLLVATDGLFSIKDNKVHLLRPSVSGNLQIAALFISKDR
                     PDLLFTGDALQGTLVFGRRSQTKDNNPAWQYLGAIPGINQQVWTFAEDNKGTLWVGTQ
                     SEAAYRLKLAFDDKGLIDLPKCVAEKFARDNGLPAGGGPVFPVHGDVLFAADSGIYKF
                     DPATKQFVTDKRFGTFPRAGGRDETVLVEDYAGRVWIRVGKESEIAIPQPDGSYRIDK
                     TSLLPIAERTISYFYPEPSGAVWICTTDGLVRFDEHLKKNYDQRYKTLLRDVTAGKQT
                     LNPEVDQDGENSMSLASSDNSLRFEYSAPFFEQEDKTKYQTWLEGFDKGWSDWGTNSY
                     KEYTNLPHGDYKFHVRAMNVYQKVSEEAIYAFTVNPPWFQTWWAYLLYALAAIGIVYL
                     VVRYRTKQLHEKHRELEKIVSDRTVELSQRVQELAVINSVQEALVSALDMQAIYELVG
                     ERIRKVFDAQAVVIATFDHAAGTENFQYGIEDGERFYHASRPLDKLRKHLISTRQKIV
                     IKTSEEGFNWFGGAALPGTKPLRSGVFVPLTIGDKITSYVSLQNVDRENAFSDSDIRL
                     LETLANSMSVALENARLFDETQRLLKETEQRNAELAVINSVQDGLASKLDIQAIYDLV
                     GDKIRDVFDAQAVGIVTLDKKMGIEKFVYMIEKGERYYPDPRPYDKLREQLIRTKKKI
                     LINNNIEAAFAEFGLKVVKGSEMPKSLLFVPLIANEEVTSYVTLQNIDKENAFTDSDV
                     RLLETLANSMSVALENARLFDETKRLLKETEQRTAELAVINSVQEGLAHELDMQGIYD
                     LVGERIRTLFDAQVVVIRTFDSDNVNEHLRYAIEKGQRFYADQPRPLMWANKALLKSK
                     ESLLINDKFNETALRFGGSAITQGQAPKSAVFVPMIVGEHVKGSVSLQNVDKENAFTE
                     SDLRLLTTLTNSMSVALENARLFDETNRLLKETEQRTAELAVINSVQEGLAKELHIEA
                     IYKLVGNKLREVMGTLDIDIRIFSPETNQVFYPYFVENGKHHDIPPQAMRGISKHVFT
                     TGQTLLVNENLPERMKEFDSVVIPGTQMEKAMLAVPIMSGTQVMGMVAISDYEKENAF
                     GESEVRLLQTVVSAMSVALQNARLFDETNRLLKETEQRTAELAVINSVQDGLVREMDT
                     QGIYDLVGDRLQHLFSAQAVIIANFDHATKTEYFNYVFENGEKFDLEPRPIGDMRQLL
                     IERKRTIYIETEEAARTEFGITAIGETKMPKSLLFVPLLSGSEVKGYVSLQNIDEEHA
                     FSKPDIRLLETLANSMTVALQNARLFDETTVLLAETKQRATELSTVNSISKALASQLD
                     PNDLISLVGDKLKDLFNANIVYLALVNQKTNIITFPYQYGENNPPMKLGEGLTSKIIL
                     TKEPLLINKDVQEQT"
BASE COUNT         1825 a         1336 c         1490 g         1555 t
ORIGIN      
        1 ggaaacgtct tgaacatggt cttcacaatt ttatcgactg tagcctgcga aggttgctga
       61 tacgtttccg gcctcttgcc ttcggctgtt gaacgccaga tcactttgtt ttcttttatg
      121 tcgatcatat caatgagcat cgaaccttca cgaagcgtat caacgctcag gttgcctgcg
      181 taaacaacag gcttgttctc gctactgaac gtgtagatgc gtgcatggtt gtcaaaagcc
      241 ggttgatata cctcaggctt atactccata tattcgccct ggctcacttc gtagttacgg
      301 ttcattttaa gtgtgtacgt gaataaacaa tcagggttgg cagtatccag gcgcattccc
      361 cttttgtcca attcttcctt taccgcgatt ccgagcattc tttcgaatgg ctttctgtcg
      421 atcattttcg tatacgctgt atcattcgta ggcataaacg cataggtctt ataattcttg
      481 aaattattgt ccgataattt ttccgatttg tacaggtccg atgttgaaga gcagctatag
      541 atcagcactg cacaaaacac aggcacgacg attcgaacct ttgcctgcaa tgatttaatt
      601 ttcccggaat gaagcataaa atattttcgg ctaaagtcga taaaaaaacg attgacctca
      661 taaaagattg aagagtcgcg gcaggttgcc ggtaatgata gttagtttga gcggatgttt
      721 tatatttaca aaaatttctg cgaagcagat ttgaaatcca aatcaaaact gttttactct
      781 ccaacgagaa cgattgaaat acggatcaac atgctaaaca aaaaattccg gcatccacgg
      841 aacgtgacct gtcagtgcct tgttatagcc ttcggcttcg tttttttctt acaaccatta
      901 tttactaacg gccagggcaa cgcggagaag ggcttgcctt ttgtaaataa ttattctcct
      961 aaaacgttta aggcctatcc gcaaattttt tctgaaatac aggacgacaa tggattgatg
     1021 tattttggca atcagaacta tattcttcag tacgatggtg tgatctggcg aaaaattgat
     1081 tgcagtaatg gtgggcaggt agcggtgaga gcaatgggca aaaacaagaa gggcttgatc
     1141 tattatggag ctattggcaa cttcggttac ctctcagccg atagcagtac tggtcaaatg
     1201 aaagccacac cgttattaaa atacattccg gattcactgc gggcctttaa tgacatatgg
     1261 tctgtttacg taacagaccg cggtgtttat ttccaggcaa gagagcgcat cttcaggcta
     1321 caagaggaca gctcaggtaa aattaccggc gaattgaaaa cgtgggagcc aaagaccagg
     1381 ttcatgtatg cattttacct ggacggcgtc tactatgtgc accagcaagc attgggactt
     1441 ttcaaaatgg ttaacgactc tctcgaactc attccgggaa gtgagttcct gggcagcgaa
     1501 cgaatgcagg tgatgttacc atatgatgat aacaagaacg aaaagaaata cttgctcggc
     1561 atgttttaca gcggctgcta tctttttgac ggcaagcagt tcaccaaatt caccatccag
     1621 gcagactcac tcctgagttc cactttatac agaggtgctg tgctgcaaga cggaaactac
     1681 gcacttgctt tggccggcaa aggcttactg gtgatcgata aggcgggccg aacgctcaac
     1741 cttattaatc gggcaaccgg tctgcaggat gaatccgtat actcggtgta tcccgaccgg
     1801 cagggaaatg tttggctggg attagacaac ggcatttcaa gaattgaaac aggttcgccg
     1861 cttacgcaat ttggcgtaca gtccggtatc actaccgcgg tgctttctgt gtgcaggttt
     1921 ggcggggtga tatatgtggg tactaccaat ggcatgcggc ggcttaatga aacaaccgga
     1981 atttttgatc ctataaaaga aattgcgacg aaccaggtgt tcacacttca gcccgacaat
     2041 gaccaactgc ttgtagccac tgatggactt ttttcaataa aagacaacaa ggttcacctg
     2101 ttacgtccgt ctgtcagcgg aaatttacaa atcgctgcct tgtttatctc aaaagatcgc
     2161 cccgacctgc tttttaccgg cgatgccctg caaggcaccc tcgtgtttgg gagaagatct
     2221 cagacaaagg acaacaaccc tgcatggcag tatcttggtg cgatcccggg tatcaaccaa
     2281 caggtctgga catttgcgga agacaataaa ggaacattgt gggtaggaac gcaaagtgaa
     2341 gcggcgtatc gtttgaaact tgcgtttgat gataaaggtc taattgatct gccaaaatgt
     2401 gttgccgaaa aatttgcacg ggacaatgga ttgccggcgg gcggcggccc ggttttcccg
     2461 gtacacggag acgttctttt tgccgccgat tccggcattt acaagttcga ccccgcaact
     2521 aaacagtttg taacggataa aaggttcggc acttttcccc gcgccggcgg tcgcgatgag
     2581 actgttttag tggaagatta tgcagggcgt gtatggatac gagtaggcaa agaatcagag
     2641 atcgcaattc cgcagcccga cggaagttac cggatcgata agacgtcgtt gctccctatt
     2701 gctgaacgaa cgataagcta tttttatccg gaaccaagcg gagcggtatg gatatgcacc
     2761 accgacggac tggtacgttt tgatgagcac ctcaaaaaaa attatgatca gcgttacaag
     2821 acgttgcttc gcgatgttac ggctggaaag caaacactca accctgaggt tgaccaggac
     2881 ggtgaaaaca gcatgtcgct tgcttcaagc gacaacagtt tacgttttga gtattcagca
     2941 ccgttctttg agcaggaaga caaaacaaaa tatcaaacct ggttagaagg ctttgacaaa
     3001 ggatggtctg actggggaac aaattcttat aaggaataca ccaatctgcc gcacggcgac
     3061 tacaaattcc atgtgcgggc tatgaatgtg tatcaaaagg tgagcgagga agcaatatat
     3121 gcgttcacag taaatccgcc atggtttcaa acgtggtggg cttatttatt atatgcgctt
     3181 gcggcaatcg gcattgttta tttagttgtc cgttatagaa cgaaacaatt acatgaaaag
     3241 caccgggagc ttgaaaaaat tgtgtcggac agaaccgttg aactcagtca acgcgtgcag
     3301 gaactggcgg tgatcaacag cgtgcaggaa gcgttggtaa gtgcactcga catgcaggcg
     3361 atctacgagc tggtgggtga gcgtatccgc aaagtgttcg acgcgcaggc ggttgttatc
     3421 gcaacgtttg atcatgctgc cggaaccgag aattttcaat atggtattga agacggtgaa
     3481 agattttacc atgcatcacg gccgctggat aaactaagaa agcatcttat atcaacccgt
     3541 caaaaaatag ttataaaaac atcggaagaa ggattcaact ggtttggcgg agccgcactt
     3601 ccgggaacaa agccattaag atccggcgtg tttgtaccgc taacgatcgg cgataagatc
     3661 acgagttatg taagcctgca aaatgttgac agggaaaacg cattcagcga ttctgacatt
     3721 cgcctgctgg aaacattggc taacagcatg agcgtggcgt tggaaaatgc gcgcctcttc
     3781 gatgaaacac agcgtttatt gaaagaaact gaacaacgca acgcggagct tgctgtgatc
     3841 aacagcgtgc aggatgggct ggcttccaaa ttagatatcc aggcaattta tgatttggtt
     3901 ggtgataaga tccgcgacgt ttttgatgcg caggcagttg gaattgttac actcgacaaa
     3961 aagatgggca tcgagaaatt cgtgtacatg atcgaaaaag gagagcgcta ctatcctgat
     4021 ccaagaccct atgacaaact gcgtgagcaa ttgatccgta caaagaaaaa aattcttatc
     4081 aacaataaca tagaggctgc gtttgctgaa tttggattga aggtggtaaa aggcagcgag
     4141 atgcctaagt cattattgtt tgttccattg atcgctaatg aagaagtaac cagctatgta
     4201 acccttcaaa atatcgataa agaaaatgca ttcaccgatt ctgatgttcg cctgttggag
     4261 acgctcgcaa acagcatgag cgttgcgctt gaaaatgcaa gactgtttga tgaaacaaag
     4321 cgtttattga aagaaaccga acagcgcacc gcagaattag cagtcatcaa cagcgtacag
     4381 gaaggccttg cacatgaact cgacatgcag gggatttatg acctcgttgg tgaacgcatc
     4441 cgcacactgt tcgacgcgca ggtagttgtt atacgcacat ttgattcgga taacgtaaac
     4501 gaacatctgc gatacgcaat tgagaaagga caaaggtttt acgccgacca accgcggccg
     4561 cttatgtggg caaacaaagc gctgctcaag tcaaaagaat cactgctgat caacgataag
     4621 tttaatgaaa cagcactcag gtttggtgga tctgccatca cacagggcca ggcgcctaag
     4681 tcagccgttt ttgtgccgat gatcgtcggc gaacacgtga aaggttctgt aagccttcag
     4741 aatgttgaca aggagaatgc ttttactgaa tcggatctca ggctgctcac tacgttaacg
     4801 aacagcatga gcgtggcgct tgaaaacgca aggctgtttg atgaaacaaa tcgcttatta
     4861 aaagaaaccg aacaacgcac tgcggaactt gcagtgatca acagcgtgca ggaagggctt
     4921 gcaaaagaat tgcatattga ggctatctat aagttggtgg ggaataaact tcgcgaggtg
     4981 atgggcacac ttgatatcga cattcgcatt ttttcgcccg aaacaaacca ggtgttctac
     5041 ccatacttcg ttgaaaatgg caagcaccat gacatcccgc ctcaagctat gcgcggcata
     5101 tcaaaacatg tttttacgac aggacaaaca ttacttgtca acgaaaacct gcccgagcgt
     5161 atgaaggaat ttgattccgt agtaattcca ggcacgcaaa tggaaaaagc catgcttgca
     5221 gtgccgatca tgtcaggaac gcaggtaatg ggaatggtag ccattagtga ttacgaaaaa
     5281 gaaaatgcct ttggtgagtc cgaagtacgc cttctgcaaa cggtcgtttc tgcaatgagc
     5341 gtggctcttc aaaatgccag actttttgac gaaacaaatc gtcttctgaa agaaacagaa
     5401 caacgcaccg cggagctcgc agtgatcaat agtgtgcagg atggattagt aagagaaatg
     5461 gatacacagg gaatttatga cctggttggt gatcgcttac aacacctttt tagcgcccag
     5521 gctgtgatca tcgccaactt tgatcatgca accaaaacgg aatatttcaa ctacgtattt
     5581 gagaatggag aaaaattcga cctcgagccg aggccgatcg gcgacatgcg gcaattactg
     5641 atcgaaagaa aacgtacgat ctatatagaa acggaagaag cagcgcggac tgaatttgga
     5701 atcacggcca tcggcgaaac aaagatgcca aaatctttgt tgttcgttcc gttactgtcc
     5761 ggttcagaag ttaaaggcta tgtgagcttg caaaatatag acgaggaaca tgcattcagt
     5821 aaaccagaca tccggttgct ggagacattg gcaaacagta tgactgtggc tttacaaaac
     5881 gcacggctgt ttgacgaaac aacggttctt cttgccgaaa caaaacaaag ggcaacggag
     5941 cttagcacag tcaacagtat cagcaaagcg ctcgcatctc agttagatcc aaacgatctt
     6001 attagtttgg ttggcgataa actgaaagac ctgttcaatg caaacattgt ttatctcgcg
     6061 ttagtcaatc aaaaaaccaa tatcataacc ttcccatacc agtacggaga aaacaatccg
     6121 ccaatgaaac ttggagaagg gctcacttca aaaatcattc tcacaaagga accgctgctc
     6181 atcaataaag atgttcagga acaaac
//
LOCUS       DASQJI010000214         8589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1863948,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000214 DASQJI010000000
VERSION     DASQJI010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8589
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1863948"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1280)
                     /locus_tag="VEV83_06300"
     CDS             complement(<1..1280)
                     /locus_tag="VEV83_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44756.1"
                     /translation="MNRRNFIELTGVSFASLLLPNFVKGQRIAGTLIQMPDEVKIFSQ
                     GTYWPLASADKQTWNYKDIVVRLKNAKDSVSVFVRSPTLALQEVQLSWRLPALKNAVV
                     LGDAWERTYGDVSWQSLNTTKKLPWYCVEHDENNTVCFGVKTGCSAICYWRIADNELQ
                     LNLDTRNGGNGVQLGGRMLHAADIVTTRNEGNENVFATVRRFCGEMCDKPRQVAEPVY
                     GINDWYFAYGNNSADLILEHTALLAPLATNNSNKPFSVIDDGWATGTDYSKPNEKFGD
                     MHGLANKIRQLGMRPGIWTRPLLAKPGESKNIFAPDFQNDNKESPVLDPTIEENIYRI
                     KNNITLYKQWGFELVKHDYTTFDIFSKWGLEMSDKMTEPGWQFHDNSRTNAEIILYLY
                     KSIRDAAGGMYLIGCNTISHLSAGMFELNRIGDDT"
     gene            complement(1429..2982)
                     /locus_tag="VEV83_06305"
     CDS             complement(1429..2982)
                     /locus_tag="VEV83_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HYK44757.1"
                     /translation="MTIKRLIIFLLLPFASGKNIAQQNSALHMNKKPGATPLNVIFIL
                     TDDHRYDFMGFTGKVPWLKTPNLDKLAKEGVWIRNASVTTSLCSPSRASILTGMYAHK
                     HTVVDNSSPLPPNLIFFPQYLQQAGYATAFFGKWHIGEADDGPQKGFDQWESFRGQGV
                     YYNPTLNINGKETRYGDSTYITELLTQHTIDWLGKQDKNKPFFVYLSHKAVHAEFYPS
                     KKFKDVYKNESIPYPSTINITASDTSIVYGSTQECPTGEMVKNDTSYNVADIPKWVCR
                     QRYSWHGVDYMYHGQIAFDDFYRRYCETLLSVDESVGEIIQYLKESGRDKNTVIIYMG
                     DNGFLMGEHGLIDKRNMYEESMKVPLLVYAPGLIEGGQTLDEIIQNIDMAPTILDIAG
                     IQKPDQMQGVSFYPLLKGQQLVWRDRAFYEYYWEYAFPQTPTTFGVREGNYKFIFYPG
                     IWDINEFYDLKNDPEEKKNLIRATAYQPLISKMRDELYDWLEETGGMQIPLKRLQGKR
                     MDNLYKDTY"
     gene            3061..4062
                     /locus_tag="VEV83_06310"
     CDS             3061..4062
                     /locus_tag="VEV83_06310"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HYK44758.1"
                     /translation="MKRDPADVKVFVSSVLPDIGIDMLRRESFNVMTWDEDAPIPPEE
                     LVKNTKQADALLCTLTAKIDASFLSDCSHLQIISQFGVGYDNIDIGEATRLGIPVGNT
                     PGVLTDATADIAFGLMIAASRKMFFMHKKIEKGEWKHFTPKSNLGIELKGKTLGVFGL
                     GRIGTEMAKRCKGAYNMDVIYHNRKPNNEAEEILNARYVSFDELLAQSDVLSVHSVSS
                     EETKGIFNRTAFDKMKSTSIFINTSRGAVHNEQDLIRALDEGRIWGAGLDVTNPEPMD
                     KNNALLNMENVAVVPHIGSATVEARNAMSKLAAENIIEFYKNGRMPHLVNPEVLRKT"
     gene            4195..5703
                     /locus_tag="VEV83_06315"
     CDS             4195..5703
                     /locus_tag="VEV83_06315"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK44759.1"
                     /translation="MRKAFFLVVFSAAMSALCAQNDNKITIGRTDSVYSTILNEQRTI
                     WVYLPNMTSGNPDTSQRYPVVYLLDGDAHFPSVVGLVQQLSQVNGNTILPEMIVVAIP
                     NTDRTRDLTPTHVSTDAPFMDSNFSRTSGGAENFISFIEKELMPHIDSVYPTQPYRVL
                     IGHSFGGLTVMDAITNHTKLFNAYIAIDPSMWYNKQQFLKATEEKLKAKNYDGERLYL
                     GIANTMPPGMTLDNMKKDTTSDTRHIRSIFALDKFIKGNPPNGLRYASKYYPDDNHGS
                     VPLMSEYDGLRFIFDYYRLNLTNHDLTDSTPAIVKKLKSHYDTVSKEMGYKISPPELF
                     VNFLGYDAMRHKYYAKSAALFQMNIVNYPQSSNVYDSYGDLFAEKKDTANAITWYKKA
                     LDIKEVRETRIKLDAMEGRPAYKPEGGLEKYTGDFEVEGVGQTVTVFVRNGALWGSVP
                     MQGEFELVPAGPDTFIVKNMNGYKVEFVVQGDKAIGFTSYQPNGTFKAHLKK"
     gene            5741..6589
                     /locus_tag="VEV83_06320"
     CDS             5741..6589
                     /locus_tag="VEV83_06320"
                     /inference="COORDINATES: protein motif:HMM:NF040209.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5829 family protein"
                     /protein_id="HYK44760.1"
                     /translation="MRFLILFLAASSCALAQHVPVYFNHVFLTFDSADISAIRNSDFI
                     KNEFAAFSTRTTMADSGRKWTGSYIYGIDSYFEIFGPSDVSDSVGFSGIGFSVDKAGD
                     ILRLDSQLNKNYKTVIELNHRKMDDKMVPWFTSLSIDDSAYFSNSHIYFWVMEYAHEY
                     FDYNHFENPNHTFSRIAYLKQYEDERKNKILKRFTGIVLNVTLQEKNFMSNFLSTCGY
                     TKKDDSTFTSPDNFSFHFKARTRNTRYSINSLEFQTNTRVDNTIVISKNLWIVFRGDK
                     GSIVFE"
     gene            complement(6610..7419)
                     /locus_tag="VEV83_06325"
     CDS             complement(6610..7419)
                     /locus_tag="VEV83_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HYK44761.1"
                     /translation="MKNKLFLPILAILFIAGCARNAITGRNQLSLVSEDTLQKMANVQ
                     YAQFLAQNKVVDASGSTDAGMVTRVGTRIANAINEYYKQKGLSSALQGYKWEFNLVQS
                     NEVNAWCMPGGKVVVYTGLLSVTQNEAALAIVLGHEITHAVAGHGRERMSQAMLAQDI
                     QVAGNLALSNNPRTVNIFNTVYGPSAQVGVLLPNSRKQESEADHYGLIFAAMAGYDPH
                     EAIPFWERMAKLGGGSKPPPFLSDHPADEERIKKLQELMPEALTYYKPAGQ"
     gene            7623..>8589
                     /locus_tag="VEV83_06330"
     CDS             7623..>8589
                     /locus_tag="VEV83_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44762.1"
                     /translation="MEIGITGARKTFTINVQLPGPGSDEEKAMFENIQQHFQEQYEKI
                     FPDKLAPRTVVIIPSFTLDREILSKVKGFLHYEERMLCLLMLLRLPLTKIIYVTSIPV
                     ANVIIDYYLHLLPGVTGNHARKRITMLSCYDSSPKPLTQKILDRPRLIEQIRQNIPDP
                     CSAHLTCFNITPLEKTLAVQLGIPLFGTDPDLFYEGSKSGGRKTFRSCGVSLPDGFED
                     LGNKEDVIHALATLKRKYPSIRKAVLKMNEGFSGDGNAIYKYPDVATDDMLEENIASS
                     FSQHLQTVAKDLGEDLFFEKFSSMGGVVEEFLEGDIKMSPSVQCVI"
BASE COUNT         2443 a         1904 c         1883 g         2359 t
ORIGIN      
        1 gtgtcatcgc caatacgatt taactcaaac atgcccgcag ataaatgact gatggtattg
       61 catcctatca aatacatacc gcccgccgca tcccgaattg acttatacag gtacaaaatg
      121 atttctgcat ttgtccttga attatcatga aattgccagc ccggttccgt cattttatca
      181 ctcatttcca aaccccattt gctaaaaata tcaaacgttg tgtaatcatg tttcacaagc
      241 tcaaagcccc attgtttgta taaagtgata ttatttttta tccgataaat attttcctcg
      301 atcgtaggat ccaatacagg gctttctttg ttatcattct gaaaatcggg cgcgaatata
      361 ttcttgcttt cgcccggctt cgccaacaat gggcgcgtcc agattcccgg tcgcatgccg
      421 agctgcctta tcttattggc aaggccatgc atgtcaccaa acttttcatt tggcttcgaa
      481 tagtcggtgc cggtcgccca accatcatcg atcacagaga aaggtttatt tgaattgttt
      541 gttgcgagcg gagcaagtaa agccgtatgc tcaagaataa gatccgcgga attatttccg
      601 tacgcaaaat accaatcgtt gatgccgtac acaggttctg caacttgtcg cggcttgtcg
      661 cacatttcgc cgcagaaacg gcgaacggtt gcgaatacat tttcgttgcc ttcatttctc
      721 gtagtaacaa tatcggccgc atgtaacatc cggccgccaa gttgaacacc gttgccgcca
      781 tttctcgtat caagattcaa ttgcagctca ttatcggcta tacgccagta acagatcgcg
      841 ctgcaaccgg tttttacgcc gaaacaaact gtgttgtttt catcgtgttc aacacaatac
      901 cacggtaatt tttttgtggt gttcagcgac tgccagctta catctccata cgtgcgctcc
      961 caggcatcgc ccaaaacgac cgcatttttc aaggctggaa gtcgccacga caattgcact
     1021 tcctgtaagg caagtgtggg tgagcgcaca aaaactgaaa cagaatcttt tgcgttctta
     1081 agccttacga ctatgtcttt ataattccat gtttgcttat ccgccgaagc caagggccaa
     1141 tatgttcctt gcgaaaagat ctttacctca tctggcatct gaataagggt accggcaatt
     1201 ctttgacctt ttacaaaatt cggtagcagt aacgacgcga atgaaacgcc cgtgagttcg
     1261 ataaaatttc gcctgttcaa ttaatgtttt tttcaaatgt agagtgccgc gatcatcccg
     1321 cgcaagattt ttctgatcgc tcacgacaga aatacgctat ttattttgac atacgagcca
     1381 tcgccttatc tggcttgccg gtgaagtcgc cagtgtaagt agaacttctc aatatgtatc
     1441 cttgtagaga ttgtccatgc gtttgccttg caatcgcttc aacggtattt gcatgcctcc
     1501 ggtttcttca agccagtcgt acagttcatc cctcatcttg cttatcaacg gctgatatgc
     1561 tgttgcacgg ataagatttt tcttttcttc gggatcattt ttgagatcat agaattcatt
     1621 gatatcccaa ataccgggat aaaaaataaa tttataatta ccctcacgaa ctccaaacgt
     1681 ggttggcgtt tgcggaaatg catactccca gtaatactcg taaaatgcgc gatcacgcca
     1741 aacaagttgt tgccctttta gcaaaggata aaatgaaaca ccttgcattt gatctggttt
     1801 ttgtatgccg gcaatatcaa gtatggtcgg tgccatgtcg atgttctgaa ttatttcgtc
     1861 aagcgtctgt ccaccttcaa ttaagccagg tgcataaacg agcagaggaa ctttcataga
     1921 ttcttcatac atgttgcgct tgtctatgag cccatgttca cccatgagaa acccgttatc
     1981 acccatataa ataataaccg tgtttttgtc gcggccactt tcctttaagt attgtatgat
     2041 ctcaccaacg ctttcatcaa cgcttaacaa agtttcacaa tagcgccggt aaaaatcgtc
     2101 aaaagcgatt tggccatgat acatgtaatc gacgccgtgc caactgtaac gttgcctgca
     2161 cacccatttg ggaatatccg caacattgta gcttgtatcg ttctttacca tttcgccggt
     2221 gggacattcc tgcgtgctac cgtaaacaat gctcgtgtcc gaagcagtga tattgatggt
     2281 tgatggatat ggtatcgatt cgttcttata aacgtcttta aatttttttg acggatagaa
     2341 ttcggcatga actgctttgt gagaaagata gacgaagaac ggtttattct tgtcctgttt
     2401 accaagccag tctattgtgt gctgtgtaag taactccgtg atgtatgtgc tgtcgccgta
     2461 acgcgtttcc ttgccgttta tatttaatgt cggattataa tagactcctt gtccacgaaa
     2521 actttcccat tggtcgaaac ctttttgcgg gccgtcgtct gcttcgccga tgtgccattt
     2581 gccgaaaaat gcggttgcgt atcctgcctg ctgtaaatat tgaggaaaga aaatgaggtt
     2641 cggcggtaac ggcgagctgt tatcaaccac ggtatgcttg tgcgcataca tgcccgtgag
     2701 aatgctcgcc ctgcttggcg agcacagcga tgtagtaaca gatgcattcc tgatccatac
     2761 gccttctttt gcaagcttgt ccaggttcgg cgtcttgagc catggcactt tgccggtgaa
     2821 gcccataaaa tcatatcgat ggtcgtccgt taagataaag atcacattga gtggtgttgc
     2881 gccaggcttc ttattcatat gcagcgcgct gttttgttga gcgatatttt ttccactcgc
     2941 gaaaggcaac aggagaaaaa tgataagccg tttaatggtc ataaaagaaa ttgatagctg
     3001 caatggaaaa atgctggaag aaaaactcat cataaattta cattgacaga atgaaaccgc
     3061 atgaaaagag atcctgctga cgtaaaagtt tttgtaagca gcgtacttcc ggatattggt
     3121 atcgacatgt tacgacggga aagttttaat gtgatgacat gggatgagga tgcgccgata
     3181 ccgccagagg aacttgttaa aaacacaaag caggccgacg cgctgctttg cacgctgact
     3241 gcaaagattg atgcgagttt tttgagtgac tgcagtcacc tccaaattat atcgcagttc
     3301 ggtgtgggtt atgacaatat cgacatcggt gaagcaactc gtcttggaat tcctgtcggc
     3361 aacacgcccg gcgtgctgac cgatgccaca gcggacattg cattcgggct gatgatcgct
     3421 gcatcgagaa aaatgttttt catgcacaaa aaaattgaaa aaggagagtg gaaacatttt
     3481 acaccaaaat caaaccttgg tatcgagcta aaagggaaaa cacttggtgt gttcgggtta
     3541 gggcgcatcg gaacagaaat ggcaaagcgc tgcaaggggg catacaatat ggatgtgatc
     3601 tatcataacc gaaagcccaa caacgaggca gaagaaatat tgaatgccag gtacgtgagc
     3661 ttcgatgaat tgctcgcaca aagcgatgtg ctttctgttc atagtgtatc gagcgaggaa
     3721 acgaaaggca tattcaacag aacagctttt gataaaatga aatcaacatc catttttatt
     3781 aatacctcgc gcggtgccgt gcataatgaa caagacttga tacgtgcact ggacgaaggc
     3841 aggatctggg gcgctggttt agatgttaca aacccggaac ccatggataa aaataatgct
     3901 ctgctgaata tggaaaacgt tgcggtcgtt ccgcatattg gctcagcgac ggtggaagcg
     3961 agaaatgcaa tgagcaagct ggcagctgaa aatatcattg aattttataa gaatggccgg
     4021 atgccccatc ttgttaaccc ggaagtgctc cgaaaaactt aagacagtta atttcaaaag
     4081 cctgggctgg ccgtattgca ttcaaaacat aaaattgaat tccgaataaa aacgaccgct
     4141 caaatcaaat tacttttggc acaacataaa gattgttcta gaaattcttc cgctatgaga
     4201 aaagcttttt tcctggtcgt tttcagcgca gcgatgtctg cgttatgcgc gcaaaatgat
     4261 aacaagatca cgattggccg cacagatagt gtctattcca caatcttaaa tgaacaaaga
     4321 accatttggg tttatcttcc gaacatgaca tccggcaacc cggatacaag tcaacgttac
     4381 ccggtggttt atttactcga tggcgatgcg cattttccat cggtcgttgg cctggtacag
     4441 cagttaagcc aggtgaacgg caatacgatt ctacctgaaa tgatagtagt cgctattccg
     4501 aacacggacc gcacacgtga tcttacgcca acgcatgtct cgactgatgc gccgttcatg
     4561 gacagcaact tctcaaggac atccggtggt gcagaaaact ttatttcgtt cattgaaaaa
     4621 gagctgatgc cacacatcga ttccgtatat ccaacccaac cataccgggt actgatcggc
     4681 cactcttttg gcggactaac agtgatggac gccattacaa atcatactaa attattcaat
     4741 gcgtatatcg ccattgatcc gagtatgtgg tacaataaac agcaattttt aaaagcaacg
     4801 gaagaaaaac taaaggcaaa gaattatgac ggcgagcgat tgtatctggg gattgcaaac
     4861 acaatgccgc caggtatgac actcgacaat atgaaaaagg atacgacgtc tgatacccgg
     4921 cacatacgtt cgatctttgc gctcgacaaa ttcattaaag gtaatccgcc gaacgggtta
     4981 aggtatgcaa gcaaatatta tccagacgac aatcacggtt ccgttccact tatgagcgaa
     5041 tatgatggac tccgatttat ttttgactac tatcgcttga atttgaccaa ccatgacctg
     5101 acagactcca cgcccgccat cgttaagaaa ttgaaaagcc attatgatac cgtctcgaaa
     5161 gaaatgggct ataaaatttc acctcccgaa ctgttcgtca attttttggg ctacgatgcg
     5221 atgcgccata aatactatgc aaagtcggct gcactttttc aaatgaacat cgttaattat
     5281 ccgcagagca gcaatgtata tgattcgtat ggtgacttgt ttgcagaaaa gaaagacacc
     5341 gcgaatgcaa tcacctggta caaaaaggcg ctcgatataa aggaagttcg agagaccagg
     5401 ataaagctgg atgcaatgga aggcagaccc gcgtataagc cggagggcgg attggaaaaa
     5461 tacaccggcg attttgaagt ggaaggtgtg ggtcagacgg tgactgtatt tgtaaggaac
     5521 ggcgccttat ggggtagcgt tcctatgcag ggagagtttg agctggtacc cgcagggccg
     5581 gatactttca tcgttaagaa catgaacggt tacaaggtgg aatttgtagt gcagggcgat
     5641 aaagcaatcg gattcacatc ttatcagccg aatggaactt tcaaagccca cttgaagaaa
     5701 tgaatttgga ttgaggattt aagaatttgt ttttctacca atgagatttc ttattctatt
     5761 tttagctgca tcctcatgtg cattggcgca gcatgtgccg gtttatttta atcatgtgtt
     5821 ccttacattc gattctgcag atatctcagc gatccgaaat tccgatttca taaaaaatga
     5881 atttgcggca ttttcaacga ggacgacgat ggcggacagc ggtcgaaaat ggactggctc
     5941 gtacatctac ggcatcgaca gttatttcga aatctttggc ccgtcagacg tttcagattc
     6001 ggtgggtttt tcgggaattg gtttcagcgt cgataaagcg ggcgatatac tacggctcga
     6061 ttctcagctg aacaaaaatt ataaaacagt gatcgagttg aaccatagaa aaatggatga
     6121 caaaatggtc ccgtggttta ccagtctcag cattgacgac tcagcttatt tttcaaactc
     6181 gcatatttat ttctgggtga tggagtatgc acacgaatat tttgattaca atcacttcga
     6241 gaatcccaac catactttta gccgtattgc atacctgaaa caatatgagg acgaacgaaa
     6301 gaataagatc ttaaaaagat ttacagggat cgtcctaaac gtaacactac aagaaaaaaa
     6361 tttcatgtct aacttcttgt caacatgcgg ttatacgaag aaggacgaca gtactttcac
     6421 ttcaccggac aatttcagtt ttcacttcaa agccagaacc aggaacactc ggtatagcat
     6481 taatagcctg gagtttcaga caaatactag agtcgacaac acaattgtca tttcgaaaaa
     6541 tttatggatc gttttccgag gcgacaaagg gtcgatagtt tttgagtgac cgacgaaaga
     6601 aaagaaatgc tattggcctg ccggcttgta ataggtcagc gcctctggca ttagttcctg
     6661 tagtttctta atacgctctt catcagccgg atgatcgctt aagaatggcg gcggctttga
     6721 cccgccaccc aacttcgcca ttcgttccca aaacggaatc gcttcatggg ggtcataacc
     6781 tgccatcgct gcgaatatca aaccgtaatg atcagcctcc gactcctgct tgcgcgaatt
     6841 aggcagcagc acaccgactt gtgcagacgg gccgtacacg gtattgaaaa tattcactgt
     6901 ccttgggttg ttgcttaacg ccaggttgcc agccacctgt atatcctgcg ctaacattgc
     6961 ctggctcata cgctctcgtc catgcccggc caccgcatgg gtgatttcat gacctagcac
     7021 aattgccagc gccgcttcgt tttgggttac actcaacagg ccggtgtata ccacaacttt
     7081 gccgccaggc atacaccacg cgtttacttc attgctttgc acaagattaa attcccattt
     7141 atatccctgc aatgcgctcg aaaggccctt ttgtttatag tattcattga ttgcgtttgc
     7201 aatgcgtgta ccgactctgg taaccattcc agcgtcagtg ctgcccgaag catcaacaac
     7261 tttgttttga gccaggaact gagcgtattg aacgttcgcc atcttttgaa gtgtatcttc
     7321 agaaacaagc gacaactggt ttcgtccggt aatggcattt cgtgcacagc cagcgatgaa
     7381 aagaatagcc aggattggca gaaatagttt gtttttcata tttacttttt tacaattctg
     7441 gaacggttga ataaagataa aaatatatta tctcatgcat caacaggcgc ttcaagttta
     7501 ccgggaacta cggagactgc gccgggcaca gcataaatga gaacaataaa aaaaattttt
     7561 tagtcgaatc ataaggtctg accgacagaa caaattccct tatctttcga caaagctttg
     7621 atatggaaat cggaataaca ggagcaagaa agacttttac catcaacgtt caattacccg
     7681 gccccggttc ggacgaagaa aaggccatgt tcgaaaatat tcaacaacat tttcaagaac
     7741 aatacgagaa aatatttccc gataagctcg cgccgagaac cgtcgttatc attccttcat
     7801 tcacattgga ccgtgaaatt ttatccaagg tgaaaggctt cctgcattat gaagaacgaa
     7861 tgttgtgcct actaatgttg ttgcgattgc ctctgacgaa aataatttat gttaccagca
     7921 ttccggttgc aaatgtgatc attgattatt acctgcatct tttgcctggc gttaccggga
     7981 atcacgcaag gaaaaggatc accatgctta gctgttacga ttcatccccc aaaccactca
     8041 cgcaaaaaat attggaccgg ccacggctta tcgaacagat ccggcaaaac ataccagatc
     8101 catgttcagc acaccttact tgtttcaata tcactccgct tgaaaaaaca ttagcggtgc
     8161 aattgggcat tccgttgttt ggcactgatc ccgatctttt ttatgaagga tcaaagtcgg
     8221 gcggcagaaa aactttcaga tcgtgtggcg tgagtttgcc ggatggcttc gaagacctgg
     8281 gcaacaagga agatgtgatc catgccttgg caaccctgaa aaggaaatat ccctctattc
     8341 gaaaagctgt attgaaaatg aacgaaggat tcagcggcga cgggaatgcg atttacaaat
     8401 atcctgatgt tgcaacagat gatatgctgg aggaaaatat tgcttccagt ttttcgcagc
     8461 acttgcaaac ggttgccaaa gacctcgggg aagatttatt tttcgaaaag ttctcctcaa
     8521 tgggaggagt agtggaagaa tttttagaag gagatataaa aatgtcgcca tcggtccaat
     8581 gtgtgataa
//
LOCUS       DASQJI010000215         6818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1248699,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000215 DASQJI010000000
VERSION     DASQJI010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6818
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248699"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..877
                     /locus_tag="VEV83_06335"
     CDS             146..877
                     /locus_tag="VEV83_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44763.1"
                     /translation="MPLKAIIVDDERLARAELKKLLLDYPDIDVVDEAANAQEGVDKI
                     ENQNPDVIFLDIQMPGKTGFDLLTDLERAPHVIFTTAYDEYALKAFDVNALDYLLKPI
                     EPKRLADAVHKLQYEISKERQGLHGVNRGPLTEADQVFVKDGERCWFVKLSEIRLFES
                     VGNYAKVFFGTNKPLILKSLNALEERLDDRIFFRANRKHIINLRWIEKIEPYFNGGLL
                     VELKGGEKIEVSRRQTVKFKEMMSF"
     gene            complement(874..2310)
                     /gene="asnS"
                     /locus_tag="VEV83_06340"
     CDS             complement(874..2310)
                     /gene="asnS"
                     /locus_tag="VEV83_06340"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HYK44764.1"
                     /translation="MFNKRTRIKDLLADEATGKEVVVMGWVRTFRNNQFIALNDGSTN
                     NNLQVVASLGEFPEDILKRITTGASLRVEGELVPSLGKGQKVELKAKTIEVLGDSDAE
                     KYPLQPKRHSLEFLREIAHLRFRTSTFGSIFRVRHTLGYAVHKFFNDKGFIYLHTPII
                     TASDAEGAGEMFRVTTLPFHNPPRKGDASIDFSEDFFGKSTHLTVSGQLEGELAAMAL
                     SDIYTFGPTFRAENSNTTRHLAEFWMIEPEMAFYDIDDNMTLAEEFIKYIIQYAMDNS
                     RDDLEFLAQRLEDEEKQLPQDKRSELGLIEKLEFVLNNSFERITYTDAINILLESPAY
                     KKKKFQYDVSWGIDLQSEHERYLVEKHFKKPVIVTGYPADIKAFYMRMNDDGKTVAAM
                     DILAPGIGEIVGGSQREERLDKLVERMKQMNVPVDEMQWYLDTRRFGSVPHSGFGLGF
                     ERMVQFVTGMTNIRDVIPFARTPKNCEF"
     gene            complement(2395..3015)
                     /locus_tag="VEV83_06345"
     CDS             complement(2395..3015)
                     /locus_tag="VEV83_06345"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HYK44765.1"
                     /translation="MLTRLVSNMFNVILFGPPGSGKGTQSQKLIEKYGWKHLSTGDLL
                     RSEITQQTPLGIEAKNFIDKGQLVPDEVVIGMISTALETNPDAAGFLFDGFPRTDAQA
                     EALDKLLHLKKTAIGVMLALDVTEDELIKRLLNRGQTSGRSDDVDEAIIRSRIREYEN
                     KTRQVADYYKTFKKVVHVPGEGSVDEIFKALCKEITMRMQAVDLAE"
     gene            3110..3592
                     /gene="msrB"
                     /locus_tag="VEV83_06350"
     CDS             3110..3592
                     /gene="msrB"
                     /locus_tag="VEV83_06350"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HYK44766.1"
                     /translation="MNKNTEENAVYSRTDSRKVALSNEEWRKLLSPEVYHIVREKGTE
                     RPWSSKYEDLQDIGTYYCAACGNPLFKSDTKFESGCGWPSFYEPISKSSVIYEHDKSH
                     GMHRTEVMCGRCRAHLGHVFDDGPTPTGLRYCINGVVLDFEKAKQAEESYNKQQHETS
                     "
     gene            complement(3589..4224)
                     /locus_tag="VEV83_06355"
     CDS             complement(3589..4224)
                     /locus_tag="VEV83_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HYK44767.1"
                     /translation="MTAYEKLLRENKAWAQSQRTQDPGYFDRLAQLQAPEFLWIGCSD
                     SRVPADKITGTQPGEIFVHRNIANMVVHTDVNLLAVLDFAVNHLKVNHVIVCGHYGCG
                     GIKAAMTNHDYNHVLNMWLRNIKDVYRSNEEQLDAIEDEEMRTDRLVELNVKEQVMHL
                     AETAIVQRTWKHENRPTLHGWVYGLKDGIINPIFKMQPGTNIDQLYTYDDL"
     gene            complement(4233..4988)
                     /gene="fabG"
                     /locus_tag="VEV83_06360"
     CDS             complement(4233..4988)
                     /gene="fabG"
                     /locus_tag="VEV83_06360"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HYK44768.1"
                     /translation="MALLDSKVCIVTGAARGIGAAIVRKLAQHGAHVAFTYVSDSSAE
                     KAAGLEEEIKGLGVNAKAYKSNAGDFAQCESFVNDVMKEFGKVDVCVNNAGISKDNLL
                     LRLSPEQWDEVMNINLKSVFNMTKQVIRPMMKAKSGSIINMSSIVGMRGNAGQTSYAA
                     SKAGIIGFTKSVAHELGSRNIRCNAIAPGFVETDMTHYLKEGTAAESFLKEIPLGRFG
                     KAEEIADVTLFLASDMSSYITGQVISACGGLNI"
     gene            complement(5154..6659)
                     /locus_tag="VEV83_06365"
     CDS             complement(5154..6659)
                     /locus_tag="VEV83_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HYK44769.1"
                     /translation="MKLFSPTISKLVRLRYNNIEEWMNDPYTAQREILQDLVTHGQNT
                     AFGRQYHFDKLFTIKAFKENVPIQEYDDIKPLVQKLMDGEQNQLWNSPVSWFAKSSGT
                     TSDKSKFIPVTEESLEDCHYQGAKDAITLYYHFNPLSNLLTGKGLVIGGSHQVSQLNE
                     ETYFGDLSAVLMQNMPFWGQWIRTPELSVALLDEWETKIETLAQSTIHENVTSISGVP
                     TWTQVLIKRILEITGKSTVKEVWPNLELYMHGGVSFTPYKENFRKLLGDGVHYMEMYN
                     ASEGFFAAQDNLNMEGMLLFLNHGIFYEFMPVEEYGKREPETVGLKKVQLGKQYAPVI
                     STNGGLWRYLVGDTIQFTSVEPFRIKVTGRLKHFINAFGEEIIVDNSDTAIAVASERT
                     GAIVNDYTAAPVYFSEKSNGAHEWLVEFEKEPASLEQFVYELDTSLKNLNSDYEAKRH
                     KNIALRMPVVHILKKGVFSKWLKQKGKLGGQHKVPRLNNDRKYIDEILQLV"
BASE COUNT         1784 a         1636 c         1488 g         1910 t
ORIGIN      
        1 tttggtatag caagcacaac gaaccgcctc aaattattat acggaaatga cgcccgtttc
       61 gaaataaaaa atatcaacgg caatacagtc caggcaaggg ttattttgcc tgtgtcggca
      121 atttcatctt taaaataaaa atcacatgcc attaaaagcg ataatagttg atgacgaaag
      181 gctcgcaaga gcggagctca aaaaactttt gctggattac ccggacatag atgttgtgga
      241 cgaagccgca aatgcgcagg agggtgttga caagattgaa aatcagaacc cggatgtgat
      301 tttcctcgat attcaaatgc cgggaaaaac gggcttcgac ctcttaactg atcttgaaag
      361 agcgccgcat gtgatcttca caacagctta tgacgaatat gcattgaagg cttttgatgt
      421 gaatgcgctt gattatcttt taaagccaat tgaaccaaaa cgccttgccg atgccgtgca
      481 caaattgcaa tacgagatca gcaaagaaag acaaggattg cacggagtaa accgcggccc
      541 gcttacggaa gcagaccagg tatttgtgaa agacggtgag cgctgctggt ttgtaaagct
      601 gagtgagatc cgtttgtttg aaagtgtggg caactacgca aaagtgttct ttggaacgaa
      661 taaacctctt atcttaaaat ccctgaacgc gcttgaagaa cgcctcgatg atcgaatatt
      721 tttccgtgca aaccggaaac atatcatcaa tcttcgctgg atagagaaga tagagccata
      781 cttcaacggt ggtttgctgg ttgaactaaa aggcggcgaa aaaattgaag tgagccgcag
      841 gcaaactgtg aagtttaaag aaatgatgag cttctaaaac tcacaattct ttggtgtccg
      901 cgcaaacggg atcacatcgc gaatatttgt catcccggta acaaactgaa ccatacgctc
      961 gaagcccagg ccaaaaccgg agtgtggtac agaaccaaaa cgacgcgtat caaggtacca
     1021 ctgcatttca tctactggca cattcatctg tttcatccgt tcgacaagct tgtcaagcct
     1081 ttcttcacgc tggctaccgc cgactatttc gccaatgccc ggcgcaagaa tgtccattgc
     1141 ggccaccgtt ttgccgtcgt cgttcatgcg catataaaac gctttgatgt ccgcgggata
     1201 gccggttaca ataaccggtt tcttaaaatg cttttcaaca aggtaacgct cgtgttcgct
     1261 ttgcagatcg ataccccagc ttacatcgta ctgaaacttt ttctttttat aagcaggact
     1321 ttcaagtaaa atattgatag cgtctgtata tgtgatcctt tcaaatgagt tatttagaac
     1381 aaactccagc ttttcaatca acccgagctc gctgcgttta tcctgcggca attgtttttc
     1441 ttcatcctca agacgttgcg ccaaaaactc aaggtcgtct cggctattgt ccattgcgta
     1501 ttgaatgata tatttaatga actcttccgc aagggtcatg ttatcatcaa tatcataaaa
     1561 agccatttcc ggctctatca tccagaactc ggcgagatgc cgcgttgtat ttgaattttc
     1621 cgcgcgaaat gtcgggccaa acgtgtagat gtcactcaaa gccatcgcgg caagttctcc
     1681 ctcaagttgt ccgctcactg taaggtgtgt gctttttcca aaaaaatcct cgctaaaatc
     1741 tattgaggca tctccttttc tgggcgggtt gtgaaaaggc aaggtggtaa cgcgaaacat
     1801 ttcgcccgct ccttccgcgt cgctcgcggt tataatgggt gtatggagat aaatgaatcc
     1861 tttatcatta aagaacttat ggacagcgta acctagcgta tgccgcacgc gaaaaattga
     1921 tccgaaggtg cttgtccgaa aacgcaggtg agcgatctcc ctcaaaaatt caagactgtg
     1981 ccttttaggc tgaagaggat atttctctgc gtccgaatcg ccaaggacct cgatagtctt
     2041 tgccttcaat tcgaccttct gtccttttcc aaggctcggc accagttctc cttcaacccg
     2101 caacgaagcg ccggtggtga tccgcttcag aatatcttcg ggaaattcgc ctaagctcgc
     2161 tacgacttgc agattgttat ttgtgcttcc atcattgagt gcaatgaact ggttattgcg
     2221 gaacgtgcgt acccaaccca taaccacgac ctctttgccg gtagcttcat cagccaatag
     2281 atccttgatc cgtgtgcgtt tattaaacat actgtttttt gcggagcgca aagataggga
     2341 gagaaggatt taggcaggca ataggaaacg gtcgtcggaa tcttatcgta acactcactc
     2401 cgcgagatca accgcttgca tacgcatcgt gatctcttta cataaagctt taaagatctc
     2461 atcaacgctg ccctcaccgg gcacgtgaac tacttttttg aaggtcttat agtaatcggc
     2521 aacctgcctg gttttgtttt catactcgcg aatgcggctg cgaatgatcg cctcatcaac
     2581 gtcgtcgctc cgtccgctgg tttgtccacg attcaaaagg cgttttatta actcatcttc
     2641 tgtaacatca agtgcaagca tcactccaat agcggtcttt ttcaggtgca acagtttgtc
     2701 cagcgcttcg gcttgtgcgt cggtgcgggg aaatccatcg aaaagaaagc ctgcagcatc
     2761 aggatttgtt tcaagcgccg tgctaatcat tccaatcaca acctcatcag gaacgagctg
     2821 acctttatca atgaaattct tcgcttcgat gccaagcggt gtttgctgtg tgatctcact
     2881 gcgaagcagg tcgccggttg acaaatgttt ccaaccatat ttctcaatca gcttttggct
     2941 ttgcgtgcct tttccgctgc cgggaggccc gaagaggata acgttaaaca tgttgcttac
     3001 taaccttgta agcaaatata acgtttgata tctaaaaatc agggcttcgg catcaacctt
     3061 tgctcgtgtt attacgtacc ttgtaattgc aaaccaattt aaccttcgca tgaataaaaa
     3121 cacagaagaa aacgccgttt attcaagaac agactcgcgg aaagttgccc taagtaacga
     3181 ggaatggaga aaattactct cgcctgaggt ttatcacatc gtccgggaga aaggcaccga
     3241 acgtccatgg agcagtaaat atgaggacct gcaagatatc ggcacctact attgcgctgc
     3301 gtgcggcaat ccattgttca agagtgacac gaaatttgaa agtggatgcg gctggccaag
     3361 cttttatgag cccatatcaa aaagctcggt gatctacgag cacgacaaaa gccacggaat
     3421 gcaccgcaca gaagtgatgt gcggtcgctg ccgggctcat cttggacatg tctttgatga
     3481 tggcccaaca ccaacaggct tacgatactg tattaacggc gtggtgctgg attttgaaaa
     3541 agcaaagcag gctgaagaaa gttacaacaa gcagcagcac gaaaccagtt aaaggtcgtc
     3601 gtaagtgtaa agttgatcaa tattcgtccc gggctgcatt ttgaatatcg ggttgatgat
     3661 gccgtccttt aagccgtaca cccagccgtg aagggtaggg cggttttcgt gcttccaggt
     3721 tcgctgcacg atagcagttt cagcaagatg catcacctgt tctttcacat tgagttcaac
     3781 gaggcgatcg gtgcgcattt cctcgtcttc gatcgcatcg agctgctcct catttgaccg
     3841 gtacacgtcc tttatattgc gcaaccacat attgagcaca tggttgtagt catgattcgt
     3901 catcgcagcc ttgatgccgc cgcatccgta atgaccgcaa acaataacgt gattgacctt
     3961 aaggtgattt acagcgaaat caagcaccgc taaaaggttc acatcggtgt gaacgaccat
     4021 gtttgcaata ttgcgatgta caaaaatttc acctggttgc gttccggtga tcttatctgc
     4081 aggtacgcgg ctatcactgc aaccgatcca taaaaactcc ggcgcctgca gttgggcaag
     4141 acggtcaaaa tacccgggat cttgtgttct ttgcgactgt gcccaggctt tattttcgcg
     4201 aagcaatttc tcgtaggcgg tcatgagatt ttttaaatat ttagaccgcc acaggcgctg
     4261 atcacctggc cggttatgta tgaactcata tcgcttgcaa gaaaaagcgt cacatcagct
     4321 atctcttccg ctttaccaaa acgacccagt ggtatttctt tcaaaaacga ctctgcggca
     4381 gttccttcct ttaaataatg cgtcatatca gtttcaacga atcccggggc gatggcattg
     4441 cagcggatat tgcggcttcc taattcatgc gcaactgatt tggtaaagcc gatgatcccg
     4501 gcttttgatg ccgcatagct cgtttgtcct gcgttgccac gcatgcccac gatagagctc
     4561 atattaatga tgcttcctga ttttgctttc atcatcggac ggatcacctg tttcgtcatg
     4621 ttgaaaacac tcttcaggtt aatattcatc acctcgtccc actgctcggg cgaaaggcgt
     4681 aacaacaaat tatcttttga gatacccgca ttattcacgc atacatcgac tttaccaaat
     4741 tctttcatca cgtcgtttac aaaactctcg cactgcgcaa agtcgcctgc attgctttta
     4801 tatgcttttg cattcacccc caagcctttg atttcttctt ccaacccggc agctttttca
     4861 gcgctcgaat cgcttacgta tgtaaaagca acgtgtgcgc catgctgtgc caatttcctg
     4921 actattgcag ctccgatgcc acgtgccgct ccggttacaa tacaaacttt tgagtcgagt
     4981 aatgccatgt atggattttt atgttgcggg caaaagtaaa tcccatctcc gatctaaaga
     5041 tttctgatgt ctgatttttg tatttaaaac gctctacgtc tgcttaagat aagagatcag
     5101 agaccagcga tcagacatca cagatcatac atcagagatc agagatgcaa cttttataca
     5161 agctgcagta tttcatcaat atatttcctg tcgttgttaa gcctcggcac tttatgctgg
     5221 ccaccgagtt tgcccttttg tttgagccat ttgctgaata cgcctttttt caggatatga
     5281 acgacgggca ttctcagcgc gatgttttta tgccgcttag cttcgtagtc gctgttgaga
     5341 ttttttagcg acgtgtcaag ctcatacacg aactgttcaa ggctcgcagg ctctttttca
     5401 aattctacta accactcgtg cgcgccgtta cttttttcgc tgaaataaac aggcgctgcc
     5461 gtataatcat ttacaatagc gccggtcctt tcacttgcaa cggcaatagc cgtgtcgctg
     5521 ttgtcgacaa tgatctcttc gccaaatgca ttaatgaaat gtttcagccg gccggtaact
     5581 ttaatgcgaa acggttccac cgaagtaaat tggatggtgt cgcccaccaa atatctccaa
     5641 agcccgccat tggttgagat gaccggcgcg tattgtttgc ccaattgtac ttttttcaaa
     5701 ccaacggttt ccggttccct tttaccatat tcctcaaccg gcataaattc ataaaatatt
     5761 ccgtggttca ggaacagtaa catgccctcc atgttcaggt tgtcctgcgc cgcgaaaaat
     5821 ccttcgctgg cattgtacat ttccatataa tgaacaccat cgccaagaag tttcctgaaa
     5881 ttttctttgt aaggagtgaa agaaacaccg ccgtgcatat ataattcaag gttaggccat
     5941 acctctttta cagttgattt tcctgtgatc tctaggattc tttttatcag cacctgcgtc
     6001 caagtgggca cgccggaaat agaagtgaca ttttcatgaa tcgtagactg cgccagggtt
     6061 tcaattttcg tttcccattc atcgagcagc gcaacggaga gttccggcgt gcggatccac
     6121 tggccccaga agggcatgtt ctgcatcagc acagcactca ggtctccgaa ataagtttct
     6181 tcgttcaact ggctcacctg gtgactaccg ccaattacaa ggcccttgcc cgtcagtaag
     6241 ttactcagcg gattgaaatg ataatataaa gtaatcgcat cctttgcgcc ctggtaatga
     6301 caatcttcca ggctttcttc cgtaacaggg atgaacttgc ttttgtcgct tgttgtccca
     6361 ctgctcttag caaaccagct tacaggcgaa ttccagagct ggttttgttc tccatccatt
     6421 agtttctgca ccaatggctt aatatcatcg tactcctgga ttggaacatt ttctttaaag
     6481 gccttgatcg tgaagagttt gtcgaaatga tattgccggc cgaacgccgt gttttgtccg
     6541 tgagtaacga ggtcttgcaa gatctcacgt tgagccgtat aagggtcatt catccattct
     6601 tcgatattgt tgtagcgtaa ccggactaat tttgatatgg tgggagaaaa cagtttcata
     6661 tcatcaaaag caaattaaga aaatgcggcc aattctcaat tttgtttccc acgacgtcgt
     6721 ttttgagtta acgtatccga tcgtttccca cgaagtgcgc caagggcaca aaggtgtgtt
     6781 taagaatatc ccagcgtatc tcgaaagtgt ttgcagaa
//
LOCUS       DASQJI010000216         5362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1864426,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000216 DASQJI010000000
VERSION     DASQJI010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5362
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864426"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VEV83_06370"
     CDS             complement(<1..357)
                     /locus_tag="VEV83_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013983884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HYK44770.1"
                     /translation="MTKRDYYEILGVSKTASADEIKKAYRKVAMQFHPDRNPGDKEAE
                     EKFKEAAEAYEVLSDTDKRAKYDRYGHAAFSPGSGGFSGSQNVNMEDIFSQFGDIFGD
                     DLFGSFFGGSRRGAGGG"
     gene            complement(391..951)
                     /locus_tag="VEV83_06375"
     CDS             complement(391..951)
                     /locus_tag="VEV83_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HYK44771.1"
                     /translation="MEDKEIQQESTTQEDFGINADENAAGTTHLNNPVEEDSYVEKLS
                     AELQEQKDKYLRLFAEFDNYRRRTAKESIELRQTAGKEVIASLLDVVDDCDRAEKQME
                     TDTDIQHVKEGAVLIFNKLRKKLQSRGLKEMESVGKEFDPEKHEAVTEIPVANQKQKG
                     KVVDEIEKGYYLNDKIIRFAKVVVGK"
     gene            complement(1270..2778)
                     /gene="lepB"
                     /locus_tag="VEV83_06380"
     CDS             complement(1270..2778)
                     /gene="lepB"
                     /locus_tag="VEV83_06380"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HYK44772.1"
                     /translation="MGWIIFLLGAVGWHIGVYGMFKKAGIEPWKAFIPFYNTWCMVEK
                     ANIKKVWFWLQFIPIAGQFITIWITIIFVMHFGQFTLLQHAAAVFLPFIYLPYVGFSK
                     DIRWGGDEVMKRYKKSAAREWIDAAVFAVVAATLIRTFIFEAYTIPTESMEKTLLIND
                     FLFVSKMSYGARLPVTPLSFPFVHNTMPGMPTTPSYLTWIQLPYKRLPGFTQIKRNDV
                     VVFNVPVGDTIINQPDYGSKVLYYDVLRQEYNGNRDALLANFPIVVHPFDKTDNYIKR
                     CVGLPGDVIQVKRGQLFVNDQPAFVSPSSQIDYLVETNGTPFSEDFLKGNLDVDITNA
                     DQIRTDSTNNNYIINLTPDKAQLVKQQPNVKNVSIYELNQFDMGQTFPFDTDDFPWTR
                     DNYGPLHIPKQGETVTLSPKNIAVYRRAITTYEHNTLEENNGSYVINGKQTNKYTFKY
                     NYYWMMGDNRHRSQDSRFWGFVPETHIVGKASLIWFSWNNGPRWDRLFKSIR"
     gene            complement(3219..4403)
                     /locus_tag="VEV83_06385"
     CDS             complement(3219..4403)
                     /locus_tag="VEV83_06385"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HYK44773.1"
                     /translation="MNKTVYIVSAVRTPIGSFGGALKDLSATQLGAIAIREAVKRAGL
                     QPEQIQEVLMGCVLQANLGQAPARQASMLAGLPNNVISTTVNKVCASGMKAIAQGAQS
                     ILLGDADIIVAGGMESMSNVPYYSAKLRWGNKYGDVTLVDGLAKDGLTDVYKNYAMGN
                     AAELCARECNVSREAQDDFAIESYKRSQAAWSEGKFKDEIVPVEIPQRKGDPIKFAKD
                     EEPFNVKFDKIPELKPAFQNDGTVTAANASTMNDGAAALVLMSKEKADELGVKPLAII
                     RSYADAEQAPEWFTTTPSLALPKAVGKAGLQLNDLDFVELNEAFSVVGIVNTQRMSLD
                     PAKVNVHGGAVSIGHPLGCSGARIIVTLINVLKQNAGKLGGAGICNGGGGASAMVIET
                     VG"
BASE COUNT         1412 a         1268 c         1050 g         1632 t
ORIGIN      
        1 gccgccgcca gcgcctcttc tgctgcctcc aaaaaaactt ccgaaaagat catcgccgaa
       61 aatatctcca aactggctga agatatcctc catatttacg ttttggctac cgctgaaccc
      121 tccgctgccc ggcgaaaatg cagcatggcc atatcgatcg tattttgcgc gtttgtcagt
      181 gtcgctgaga acttcgtacg cctcggcggc ctctttaaat ttctcttcag cttctttatc
      241 tcccgggttt ctgtccggat gaaactgcat cgccactttg cggtaagcct tctttatctc
      301 atcagcagaa gcagtttttg aaacacccag tatttcgtaa taatctcttt ttgtcatgtt
      361 tccacctctc tccttaacag gagttgtttt ttactttcct acgaccactt tggcaaagcg
      421 aatgatcttg tcatttaaat agtatccttt ttcgatctca tcaaccacct tgcctttctg
      481 tttttgattc gcaacaggga tctcggtgac tgcttcatgt ttttcagggt cgaattcttt
      541 tcccacactt tccatttcct taagcccgcg gctttgtagc ttctttctca gtttgttaaa
      601 tatcaaaacc gcaccttcct ttacatgctg aatgtcggta tcagtctcca tttgtttttc
      661 tgcacggtcg cagtcatcca ccacatcaag caaagacgcg atcacttcct ttcccgccgt
      721 ttgccgcagc tcaatacttt cttttgctgt ccgccgcctg taattgtcga attcggcaaa
      781 caggcgaagg tatttgtctt tttgttcttg aagttccgcg ctcagctttt cgacatacga
      841 gtcttcttct acggggttgt tgaggtgggt ggtgcctgct gcattttcgt cagcatttat
      901 tccaaaatcc tcctgcgtcg tcgattcctg ttgtatttct ttatcttcca tagatcttta
      961 tgtgaattct tacaggctca aaatttttgc cagcagcaaa ttagacgaaa aattgtcagg
     1021 cgaaaaaaca aaatttttga agaagacgat taggttcgcc gataagttga tcagttctaa
     1081 aactctggtt actgtcctta cttttattcg caacttttac ccgcactgag atcatgtgtg
     1141 agcgggcggc ttattcccat tagatgtgtt ggcaaacttc caaggtaagg caatgcaagt
     1201 gttttgcaag gaggtcagat agctatgcca ttaaaattta aagactcaac gcgttaaaac
     1261 gcgtttggat tagcggatgg atttaaacaa acggtcccac cttggcccat tattccagct
     1321 aaaccaaata agcgacgcct tgccgacaat gtgtgtttca ggcacgaatc cccaaaagcg
     1381 gctgtcctgg ctgcgatgac gattgtcacc catcatccag taataattat acttaaaagt
     1441 gtacttgttt gtttgcttgc cgttaatgac ataagagccg ttattttctt ccagcgtatt
     1501 gtgttcatag gttgtgatgg cgcgccgata tacagcaata ttctttggcg acaatgttac
     1561 ggtctcgcct tgtttaggaa tatgcaaggg cccgtaatta tctcttgtcc acgggaagtc
     1621 atccgtatca aatggaaatg tttgacccat gtcaaactgg ttcaattcat atatggaaac
     1681 gtttttcacg ttcggctgct gttttaccaa ttgggctttg tcgggtgtaa ggttgatgat
     1741 atagttgtta ttagtggaat cagttcttat ttgatccgcg ttcgtgatat ccacgtccaa
     1801 attccctttt aaaaaatctt cgctgaacgg cgtgccattc gtttcaacca ggtagtcgat
     1861 ctgcgaactt ggcgaaacaa acgcgggttg atcattcaca aaaagctggc cccgcttcac
     1921 ctgtatcaca tctccgggca gccctacgca acgtttaata taattatcgg tcttatcaaa
     1981 aggatgaaca acgatcggaa aattggccag caaggcatcg cggttgccgt tatattcttg
     2041 tcgcaatacg tcgtaataca aaaccttact tccataatcg ggttggttga tgatcgtgtc
     2101 accgacagga acgttgaaca ctacaacgtc atttcttttg atctgagtaa atcccggtaa
     2161 ccttttgtaa ggcaattgta tccacgtgag ataagaagga gtggtaggca ttcccggcat
     2221 tgtgttgtgc acgaacggaa aactcaatgg cgtaacgggt aaacgtgccc cgtagctcat
     2281 tttgcttaca aacaggaaat cgtttataag caaagtcttc tccatgctct ctgttggaat
     2341 tgtgtatgcc tcgaaaatga aagtgcgaat aagtgtggcc gccaccactg cgaataccgc
     2401 agcgtcgatc cattcgcgcg cagcggattt tttatagcgt ttcattacct catcgccgcc
     2461 ccagcgaata tcttttgaaa agcccacgta tggcaggtaa atgaacggaa ggaaaacggc
     2521 ggctgcgtgt tgcaacaaag tgaactggcc gaagtgcatt acaaaaatga tagtgatcca
     2581 tattgtaatg aactgccccg cgatcgggat gaactgcagc caaaaccaaa cttttttgat
     2641 gttggctttc tcaaccatgc accaggtatt ataaaaaggt ataaacgctt tccatggttc
     2701 tatacctgct ttcttaaaca ttccatacac gccaatatgc caacccactg ctccgagtaa
     2761 aaatatgatc catcccattc attaattttt taatgggaac aaaagtaata ttctaatcac
     2821 ccctgcacaa caggacaaag aaaagttttc ttaaatatga taaagtgtga aaaagaaagt
     2881 gtagttattc aagaactgca ctccataaca gttaataatg agatgccgat caaatcgggc
     2941 atgacgttca atgtcgttgc gttttgttct tgcgttataa aaacagtaga attattaaat
     3001 gtgtcttgcg cgtcattcct gcgaaggcag gaatctgatt ttgaatcctg aagttgtcgc
     3061 aaattcaaca gcaggtgtcc gaccgtattt gggtatgacg ttcgaaaagg ttgctttttg
     3121 ttcttgcgct actaaagatg tgacagttaa cgaagttcaa cagaagatca gagatcatac
     3181 atcatacatc agacatcata tatgcgccct tcgaaatctc aacccacagt ttcaatcacc
     3241 attgcgcttg cgccaccgcc accattgcaa atgcctgcgc cgcctaattt gcctgcgttc
     3301 tgcttaagca cattgatgag cgttacaatg atcctcgcgc cactgcagcc cagtgggtga
     3361 ccaatagaaa ccgcaccgcc atgcacattc actttcgcag gatccaaact cattctttgt
     3421 gtattcacga ttcccacaac agaaaatgct tcattcaatt ccacaaaatc caggtcgttc
     3481 aattgcaaac ctgctttgcc gacagctttt ggtaaagcta acgatggcgt tgtggtaaac
     3541 cactcaggcg cttgttcggc atccgcataa gatcttatta tcgcaagagg ttttacgcca
     3601 agttcatctg ctttttcttt gctcattaaa acaagcgctg cagctccgtc attcatagtg
     3661 cttgcattag ctgcagttac agttccatcg ttttgaaacg cgggttttag ttccggtatt
     3721 ttatcaaatt ttacattgaa aggttcttca tcctttgcaa attttattgg atctcctttt
     3781 cgttgtggaa tttcgaccgg cactatttca tctttaaact ttccttcgct ccatgcggcc
     3841 tggcttcgct tataactttc gatcgcaaag tcatcctgcg cttcacggct cacgttgcat
     3901 tcgcgcgcac atagctcggc tgcgttaccc attgcataat ttttatacac gtccgtgagg
     3961 ccatcttttg caaggccatc aacgagcgta acatctccat acttattacc ccatctcagt
     4021 tttgctgagt agtaaggaac attgctcata ctttccatgc caccggcgac aataatatct
     4081 gcatcgccca gcaaaatact ttgtgcgccc tgcgctatag ctttcattcc actggcacaa
     4141 actttattta cggtggtgct gatcacgttg tttggcaagc ccgcgagcat ggaagcctgg
     4201 cgtgcggggg cctgaccgag attcgcctgc aaaacacagc ccatcaaaac ttcctgaatt
     4261 tgctccggct gcaggcctgc tcttttcact gcttctctta tcgcaatagc tccgagttgt
     4321 gtggctgaaa gatcttttaa tgcaccgcca aagcttccga ttggagtgcg caccgcggaa
     4381 actatataaa ctgttttgtt catgaagaaa tttttgaagg cgcaaaggta acgattgtta
     4441 gtttgagaag aattgccaac ggagttaaaa ggaagtgcat aaaaaaacga tgtactttac
     4501 gattaattct tctattgcgc caatatctgg tcgtgtctcg ttatgttgta ttttttcttc
     4561 gtggccattg tgctcctttt ttgtaacaca acgaacttca cacaatggac acgagctcat
     4621 tattgttgct acacctcccc gaaaatcagc tctgttaaat gacggcaaaa gaaaccgttt
     4681 aataggccgt ttttagttag ttaaaccgac attcttttta gtttgacctg tagcgatctt
     4741 tgaaaacaat tcgggttttt aaagagcaaa gacgtcatgg ggtaactaaa aagaaatgaa
     4801 aaaaacttgc aagcaagaat aaaaaatcat aaattataca agttaatttc ccatctcttc
     4861 ttcaaaactc ttactgtaaa actcaacatc atgaaatcat actatatgcg gcctaagccc
     4921 gtcgccttta ttttttttca gtgcatgatt gcaaccgcgc tttttgctca agctcctgca
     4981 acattatcgc aacagaataa cagcctggca aaattcccgg ccacaacaaa cacgaaactc
     5041 acctataaaa ttattgatgc atccaaccac acattatgtt ttgctcttac ttgtttaagc
     5101 ttttaaaatt taatcaatac actgcacgtc atttccgcga aggcggaaat ctcattctag
     5161 aaaccctacg aatctttttt ggagcaggtg tgcccaaata aatccagtat gacgtgcgat
     5221 cagcttgctt ttgctcttac atcatcaagt tgtaacaatt ttctaatcac cttgcacgtc
     5281 attcccgaga actcgggaat cgcataattt tttgctatgc aatacggagg tactattatc
     5341 cacctcgatg tcataatatt tt
//
LOCUS       DASQJI010000217        21288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1864429,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000217 DASQJI010000000
VERSION     DASQJI010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21288
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864429"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..2702)
                     /locus_tag="VEV83_06390"
     CDS             complement(246..2702)
                     /locus_tag="VEV83_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44774.1"
                     /translation="MFRNYFRAAWRNLMKNKVFSFINIIGLSIGMAACLLILQYVSFE
                     LSYDQFNEHAADIYRVSNDRYQEGKLVQHGTITYSGIGKAMQDDFPEVVNHARVEPWG
                     KGIVSYNTKKIGDQDILFVDNSFLAMFSYPFAAGNPQTALQDPRTAVLSETLAKKLFQ
                     INGNDFGSLLGRPVILGNDSIPYKVTGICKDVPENSHLQFDILLSYNTLYSSFGWKAA
                     DYDFGDSDFWHYIQLRHGTDYKALEAKLPAFSQRHFQGNKVSGSDEKFYLQPLSKAHL
                     YSDFEYEIGETASSTVVWGLLIIAMLIIVIAWVNYINLATAKSMERAREVGVRKVSGA
                     TKQQLVKQFLTESFIVNIVALALALLMVTLLQSSFNSLVQHQLSLSYLFEKGLNGYDI
                     TAAWIVLILGGIFISGLYPAFVLSSFKPILVLKGKFTTSRKGIVLRKGLVIGQFAITV
                     ALIIGSMVVYQQIKFVNAQDLGMNISQMLIVRPPELTYWDSTFINHENSFTNELKKIP
                     HVKGATTSWNIPGGETGRSFSVRRIDQDSTTHFTMRHTGISLGYLDVYQVKLLAGRDF
                     TYTDFNPDFDKLHNIILNESAIKLLGYKSPQDAIGKTIMRYRSKWDIIGVIADYHQKS
                     LRYAVEPTMLFPAYGTGSSISVKVDPKDLPATIAAIRKDYDEFFPGNIFDYYFLDDHF
                     NEQYANDQLFGKVFTIFSGFAIFIACLGLLGLSLFATTQRTKEIGVRKVLGASVSNIV
                     VLLSKDFMKLIIIAFIVASPVAWYVMHSWLQDFAYRINVSWWIFLIAGSLAVVIALAT
                     ISLQAIRAAVANPVKALRTE"
     gene            complement(2820..5225)
                     /locus_tag="VEV83_06395"
     CDS             complement(2820..5225)
                     /locus_tag="VEV83_06395"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44775.1"
                     /translation="MFRNYIITALRYFWKNKSFSFINIAGLALSMAVCLLLIMIIKDA
                     NEYDNFHPNSDRVYRINTEAIRKDGGSEPYASSPYVVGATLASTFPGVERWTMFNTGV
                     NADVSADDRKFSFSMHFTNASFFEMFGFTLQTGNASTALNEPFSIVLTKELSEKLFPN
                     ADAIGKTVDVAGTGLFKVTGVLNAFPGKTHFQFEALGSFSTIPSLEKTNSIFPTLTNW
                     NNYYSNYTYIRLKPGVKSSQVEAALDKIEKENYKDLPLETRDAGYRFVLQPLNKITPG
                     PILSNGMGNALPSTILWFFGLLAFIIIMCAAFNYTNLTIAKAMSRMKEIAMRKVVGSS
                     RRDIFLQIVVESVITSLLALVIAFVFLQFLIPQFSRIEFINQADISFKTDAAVLLLFI
                     AFATILGLIAGLLPATVLSRVKPLMLMQKLQSLKVFRHLGLRKTLLVIQFMISLVFIN
                     IVVITYKQMQYGININFGSRQTHIFNIPLQGMDYAKAKQEFSKIAGVEKISAVSVLMG
                     TYSDWADDVRTSKEKDPVTVRDYFVDENYLSNFNLKLVAGKNFPSNTAQKREQYAIVN
                     ENFVKHFQLGTPMDAIGKTIMVGDSTMLIITGVLKDFLFKPAEYALEPMLLRYDPAKW
                     SILNLNIASANTMQTTAQLEAAWNKLDPYHAFEGKFYEDSIQEIFADMRDAVWIIACI
                     GIIGVTIACLGLLGITIFTIQSKTKEISIRKVIGATPASLVRLLSRSYLQVMVIAVLI
                     AIPVGVLLGNLILQQMSQRISLSVGLFIPGVIIIVLLSMLTIGSQTLRAALLNPVRGL
                     REE"
     gene            complement(5424..7823)
                     /locus_tag="VEV83_06400"
     CDS             complement(5424..7823)
                     /locus_tag="VEV83_06400"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44776.1"
                     /translation="MFRNYFKTALRNLLKNKTFSAINIVGLAIGMSVCIIIMLFVSYE
                     RSFDELHTKNIYRLNEVQKFPGMVASQKVALSMFPMGPTLNKEFPEIKNFTRIHWTGK
                     YEMTAGEKRIFFSESYFVDSTFLQLFDFKLLEGNRATALQKPNSAILTQASAQKLFGK
                     QDPIGKTITHYGGDTTSFVVTGVLQNVPQNSQLQFDALYSFSSIYQPWMFDNWGGNWL
                     DTYFELAPNTNVAALEKKFPGYLKKYLAEEDRWKFYELFLLPLTDVHANATDIGLDYL
                     NYQKFDKNYTNIFFGIAIVVLLIACINFMNLSTARSAERAREVGIRKSVGAYRWQLST
                     QFISESVILALIALLLAIGLVELALPWVNQLSQRELTFPLLTSAPLFISVVGGTILIG
                     ILSGLYPAGYLSSFQPVKVLKGSIQTGKNKGALRNVLVVAQFSSAIFLMIATIFAVKQ
                     LNFMQHRDPGFNRDQVVTIPLDGVTSRKFDVIKQDLLKSTLVTAVSGSQDVLGSHLDQ
                     SGIEFRGDGPKRELTSTRLIVDHDYLTLFKIPIVLGRNFSADPQEQGKEYIINEALAK
                     ELLKDDPKKPMSFLLGKTFGFDSLGTIIGIAKDFNFNSLHYKIETMFMFNQKDWGLSN
                     ISVKINGSKAKDALAFIQSVWQRNCPDTPFEYQFLDDHFADVYRADSQVSSIVGVLAV
                     LAIIISCLGLFGLASYSAERRLKEVGIRKVLGASVQNIVAMLSKDFLKYVLIAAIIAW
                     PLAWFSVYKWLQDYAYRIDISWWIFVAAVFLAMVIAFVTISFQAIRSAVANPVKSLRT
                     E"
     gene            complement(7911..10334)
                     /locus_tag="VEV83_06405"
     CDS             complement(7911..10334)
                     /locus_tag="VEV83_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44777.1"
                     /translation="MFKNYLKTAFRFLLKNKSFSFINIIGLATGTLCCLYILLYVEDQ
                     FGYDKHENNAADIYRVTSQLTLPGDKHNISTCSPPIAPAIKRDFPEVEQFTRVVSDFN
                     AGKHLLRYNEKLIYEDKPLYVDSTFFDVFTYHFTSGNAKDVLSEPYSLVLLNTTAEKL
                     FGSEDAVGKVIEIDDNNGKHDYKITGVVDESLGKSHLEANMFITMNSGGMGEFVRQND
                     SWAGNNLTFSYIKLRPDADAAALEKKLPAFLNKYGGQQLKDIGMQKTLHLQPLTSIHT
                     TTGYEHELSKSVDPSFLYILLLIAVLIQVIACINFMNLSTARASKRAKEVGIRKVVGA
                     ERSDLMRQFMSESFLLSLISVLIALPLLLLALPLLNEVTQADIRVSMFSNYRIWLLLG
                     GIIGATGLVAGSYPAFYLSAFEAIKVIKGNFTNHISATGIRRSLVVFQFVLSIVMIAG
                     IIVIYSQLNYIQHKDLGFDKNQKLVFSFYTDDTRKKIDGFATDLRQLAEVKEVGRANN
                     YLSQVVFNDYPVYLAGGSPTNATDVQNMSTDEHFVKANGIKIISGRDFHLYDSGKVLV
                     NETVLKRLGLKPEQAPGTKLYTQFPGVPEFHREIAGVMKDFNFNSLHDEVKPLMFIYS
                     EPQPYMSNLTVATDSKNYQALLSKIEALWHKDFPSAPFDYKFLDQEVQKQYETEITLS
                     KIINSFTIMAILISCLGLFGLAAFSAEQRKKEIGVRKVLGASVPGVVGLLSKDFLKLV
                     GIAILIATPVAWWAMSKWLQAFAYRIEIRWWMFAFAGCIAIFIALITVSFQAIKAAVA
                     NPVNSLRTE"
     gene            complement(10425..12800)
                     /locus_tag="VEV83_06410"
     CDS             complement(10425..12800)
                     /locus_tag="VEV83_06410"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44778.1"
                     /translation="MFKNYFKIALRNLWRDKTYTVINILGLAVGIAAMVWAFQDYRFS
                     FSWDNFQPDRDNVYRALTFKDGADRVKGIFPMPLVAAAKNDVPGIENAVRYDSRGMNL
                     KAKQTEPFTEQVYFTDPGFFQLFNFPLVKGSNNIADLDAVLITESIAKKYFGKEDAVG
                     KTLLFYAGESYARPLTVKGVLKDIPMNSSMRFGILTNFDNQLKPDGSKILPDDWTWFL
                     DAAFFKIPNHADAITVAEKLKQYLPLQNKAREDWKASGFEMMSLREQATKSDFIDNNG
                     LYDRPEDSATYGPFVLAFLIFLSACLNFSNTTVARSNKRLKEIGVRKVMGSSFSQLVF
                     QMILECSAIVVVAIFLSMLFNKWWLPFFNSMFNGVHVEANYLDDPSLLLFVGIMLIST
                     SLLAGAYPAFYVSRFNASSIFRGNIKFGGSNLFSRLMLGLQLSIAIITVIAAIAFAKN
                     SEFQKTYDYGYNLENIMGVSFTDPQKFAAFKNEIERIPEVTGVAGTRHHIAFGFRNAV
                     AEAEGVKKETNYFETGSGYLQVMNLRTVAGRPFDPQMESDYKDALMITENMAAMYGWT
                     DKQALGKQIHIDSINYTVIGVLKDFLSTGLFDPVKPVAMKLSKEDRCQYLIVQARPEN
                     LTTVYNKTKAAWAKLFPLMPFNGFYQNEVTAEGYRTSKSIAQIFFWFGIVSVLLTATG
                     LFALVSLTVLKKMREIALRKVVGATPRHILMLVNKGYFWIFLIAGGLGCYGGWALTKL
                     LLDMIFKVNVGVSTSTLTGSVVALFAITGITTGIKVWQVIKTSPVKLLRTE"
     gene            complement(13050..15473)
                     /locus_tag="VEV83_06415"
     CDS             complement(13050..15473)
                     /locus_tag="VEV83_06415"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44779.1"
                     /translation="MFNNYFKTAWRNLLRNKTFSAINVLGLGIGIAAFLLIVNYLRFE
                     YSFDDFNTNKDRMYRVPMTVTETDGNPQTFAFTYPAVAPAMKKDFPEVQEVVRFRRRS
                     GIVQHGDQKIIEGGTIYFVDPAVFKVFSFKFEKGSAATAFAQLNDAVITHSTAIKYFG
                     NEDPIGKTLHYNDEDYVVTALLKDVPANSHLQFHILLNYNKYIQLTNGDANTSWGWSD
                     FYTYLLLRPGANAHALQSKMPVFAQRYMGDDMKKNGYTVSFEIQPLKDIHTRSRYDYE
                     MAGSGDLYYLKYLGIAALFILLIALINYINLSTAHSLERSKEVGVRKVIGATKMQLVR
                     QFLAETFLMNAFGIIIGFVLFKLALSQFSLLIGQNVTDLQTATWQFWVVMLIVFVSST
                     LLAGFYPAFILSSFQPVQSLKSIAGFGTARQSRNFFRKSLVVVQFTAAIILIGGAIGF
                     YRQLQFMSTRDLGVNIKQTLVLQQTANVDSGKIPSVQSFLNDLQSIPGVQAISSSTDV
                     PGSEVGSSTDFRVMSSNEGKRCRIFGIDEKFIPNYGLSLAAGRNFDKDKPASSDTNQV
                     LSLIVNETAAKIFGFNSAQDAIGKMLHGAGYDCTIVGVLHDYHQQSLQYNYDPIVFYP
                     EQEINMSSYSLKLNTSNLQQVIAQVKQVWNKRFPASPFTFFFLDEHFNEQYRNDQLFS
                     TILWLFTLLAIIIASLGLFGLSLYTVAKRTKEISLRKVLGATVLQITGLITKDYVKLI
                     VYAGLIAIPLAYFLLQNWLNDYAFHISIGLWFFVLPFLLILVIAMSTVLYQSIRAALT
                     NPVKNLRNE"
     gene            complement(15590..18058)
                     /locus_tag="VEV83_06420"
     CDS             complement(15590..18058)
                     /locus_tag="VEV83_06420"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK44780.1"
                     /translation="MFYNYFKTAFRTLIRNKLYTALNVAGLTFGLSCFLLIGLYLFDE
                     LTFDTQHKNGDRIYRVIEQKTVNGESTTIAAAAYKLAEESKKKITGVENTTRIQRLGR
                     ANILNPENPANFFQETVTVADEQLLSIFDFPLLSGDRTTALKQPNSIIITRALALRLF
                     NSTDVLGKSLQFSFMESPLKVTGVLKDHPKNSTFDFSSVMSEASFQNDEFFKQFWASD
                     WLSENFSVYVLLRPNTDPARIGDEMSKLVHANVNPPAGTMVSFNLQPLKDIHLNSENI
                     TDGARNSNVDPIVKGSMFYIKVFSLIALFVLVIAGINYMNLTTARASSRLKEIGVRKT
                     IGADRSHLIRQFLFESLLVTFISFLLSLIVVNLVLPAFNQFTNKQLSLDFSTDYRIWV
                     YAIAFVALMAFLSGSYPALMLSRFKPVLLLRGLKIQNATGLSLRKTLVIFQFTISVVM
                     IIATIVIFMQVHYMNNTDLGFNKDLLVVIDVNTGKARANFQAVKTEMAKIPTVKNVSV
                     TSRVPGEWKSFRTVKVKNAGSTGEPDVAYMFGADKDFLKTFQVHLLNGRNFDTPADSS
                     TVIVNETAAKMLGITQAAGQLIEIPAMSENGGTFTTFNDENVPFKPRVIGIVKDFHFQ
                     SLRDKIAPLILGYNQNPIQVIDYYSCRIASNDIGGTLEKLKQVMVNNDKDDPFEYHFL
                     DDQLALFYIEDARHQTILIWAALATIFIACLGLFGLATYSAEQRIKEIGVRKVLGATV
                     AGLASLLSKDFLKLVLIANIIAFPVAWWATSRWLQEYAYHINIEWWVFAVAGLSACII
                     ALITVSYQAIRAAMSNPVAALRSE"
     gene            complement(18178..20613)
                     /locus_tag="VEV83_06425"
     CDS             complement(18178..20613)
                     /locus_tag="VEV83_06425"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK44781.1"
                     /translation="MIKHYFKIALRNLGRQKVLSLINIIGLSLGLACFSLFLLYAVNE
                     FSFDRFHTNADNIFRLYRWTEPMNGQEAEGDVYMPSPLGPALKRDMPDVVNYVRFRDA
                     WQESFIKIDGQVKRKKMSFADPSVLSVFSFPLKYGAKNALQDPRSVIITQQAAKDLFG
                     TDNVVGRTMQVKTEEDFVPFTITAVTENIPANSSIRFELLGNFNYFETTSSGTRGVNN
                     WNRSSYITYVQLNPGSGLPGDVSRLASFRKKYYPTEEADLKQSGFKWTGSAPPVRFGL
                     QPLRAGHTDTKIYGGIVDNVNPQTIWILLSIAAGVLLIACINFTTLAIGRSARRAKEV
                     GVRKVIGGERRQLVTQFLSEAIILTILSAALGLAFAKLLLPFFNGLSGRDLDFSFSQY
                     PEMAWMLAGLILLVGLLAGSYPAFILSSFKPVEVLKSKIRVHGSNLFTKTLVTVQFAL
                     SIGLIISTAIILQQTNYMASKNPGFNKENVVVVDASDTKTKEIYPLFKQALLSRGDIA
                     GMSSAELGLGENEGWSRSGFEYKGTHKDVYEYFVDADYIPVMGMQLLAGRNFDPRIAD
                     DTVTSVIVNETMVKDFGWTIQNAVGQKLTGYMESKTPVVIGVVKDFNYRPFSEKIMPQ
                     MFHQFSDYTPFKFFVRIKPGNPAPALAAMQSTWKGLVADLPFRYSFLDENLDNFYKAE
                     RKWSSIIGWAGGVSVFLACLGLFGLASLAVVNRTKEIGIRKVLGATLPVIIQLLAKDF
                     LKLVLIALLIATPFAWYFMNKWLQDFAYRISVSGWIFLLTGIVAVVIALFTVGFHAVR
                     AAMANPVNSLRTE"
     gene            complement(20717..>21288)
                     /locus_tag="VEV83_06430"
     CDS             complement(20717..>21288)
                     /locus_tag="VEV83_06430"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK44782.1"
                     /translation="PEVFTMEPSFNFGEIWVKIKPTDAPHTLNLLRETFKNILPYYPY
                     SYDFMDDINAKNYEAETKWKQIIGIASALFIFISCIGLLGLVILSIQQRTKEIGIRKV
                     LGAAVAKIVVLISRDFVILISIAFVIAVPAGYYFTNKWLQNFAYRINMAWWMFGLAGA
                     VVILVALFTISFQAIKAAMANPVKSLRTE"
BASE COUNT         5998 a         4968 c         4395 g         5927 t
ORIGIN      
        1 tattacacat gccaggccga tggacaaccc gccaatatta atgatgctgc tcgccttgtt
       61 gcgaagtatg tttcgccatg cagatctcaa ataatttttg aacatcgcgt tgtgatttac
      121 gatttatgaa ttacgattta ccattgcaga ttggcgattg cagatttcag attttcaaaa
      181 cgtcaaacct caaacatcaa acctcaaaca ttcaactcat tactgatcat tcatcactca
      241 tttcatcatt ccgttcttaa cgccttcacg gggttggcca ccgcagcgcg gatcgcctgc
      301 aaactgatcg ttgccagtgc aatcaccacg gcaagcgagc ctgcaattaa aaatatccac
      361 caactgacat ttattcggta agcaaaatcc tgtaaccaac tatgcataac gtaccatgca
      421 acaggcgagg caacgataaa ggcgataatg atcagcttca taaaatcttt cgaaagcaag
      481 accacaatat ttgaaacaga agcgccgagc actttgcgta cgccaatttc tttcgtacgt
      541 tgcgttgttg caaataatga cagcccgagc aaaccgaggc atgcaatgaa gattgcgaaa
      601 cccgaaaaga tcgtaaacac ttttccaaat aactggtcgt tggcatactg ctcattaaaa
      661 tgatcatcca ggaaataata gtcgaatatg ttgccaggga aaaattcgtc ataatctttt
      721 ctgatggcgg caatggttgc cggcagatct tttggatcca cttttacaga aatcgaactt
      781 ccggtgccgt aggcaggaaa gagcatcgta ggttctaccg cataacgtaa tgacttttgg
      841 tggtagtcgg cgatgacacc aatgatatcc catttcgatc tataccgcat tatcgttttt
      901 ccgatcgcgt cctgcggcga tttgtagccg aggagtttta tggcgctctc atttaaaata
      961 atattatgaa gcttgtcaaa atcgggatta aagtctgtgt acgtaaagtc gcgcccggcg
     1021 agcaacttta cctggtacac atcaagatag cccaggctta tgccggtgtg ccgcatcgtg
     1081 aaatgggttg tcgaatcctg gtcaatcctg cgcacactaa aacttcttcc tgtttcaccg
     1141 cccggaatgt tccaggaagt tgtcgcgccc ttaacatgcg gtatcttttt caactcattg
     1201 gtgaaactat tctcatggtt gatgaatgtg gaatcccaat acgttagttc cggcggccta
     1261 acgatgagca tttgtgaaat attcatcccg agatcctgcg cattcacaaa ttttatctgt
     1321 tggtatacca ccatcgaacc gatgatcaat gcaaccgtta tggcgaactg gccaatcacc
     1381 aaaccctttc gcaacacaat tcctttcctt gatgtcgtga atttcccttt caaaacaagg
     1441 atcggtttaa atgacgaaag cacgaacgcc gggtacaggc ctgaaataaa aataccgccc
     1501 aggatcaata cgatccatgc tgcggtgatg tcgtaaccat tcaatccttt ttcaaacagg
     1561 tacgacaaag agagttgatg ttgcaccaga ctgttgaacg aactttgaag aagcgttacc
     1621 atcaacagcg caagagctaa tgcgacaata tttacaataa aagattccgt gagaaactgc
     1681 tttaccaatt gttgctttgt tgcgccggaa acttttctta caccaacttc tcttgcgcgt
     1741 tccattgatt tcgccgtagc aaggttgata taatttaccc aggcaataac aatgatgagc
     1801 atggcgataa taagcagacc ccatactacc gttgaactgg ctgtttcccc gatctcgtac
     1861 tcgaaatctg aatagagatg cgcttttgac agcggctgca aataaaactt ctcatcactt
     1921 cctgaaactt tattgccctg gaaatgccgc tgactgaacg caggcaattt cgcctccaaa
     1981 gctttgtaat cggtaccatg ccgcaattgt atatagtgcc aaaaatcgga atcaccaaaa
     2041 tcatagtcag ctgctttcca accgaaagaa ctgtatagcg tgttatacga aagcaagatg
     2101 tcaaattgca aatgagaatt ttcaggaaca tccttacaaa taccggtcac tttgtacgga
     2161 atggaatcat tgccgagtat gaccggcctg cccaggagag aaccaaaatc gtttccgttt
     2221 atttgaaaaa gtttttttgc aagagtttcc gaaagcacag cagtgcgtgg gtcctgcaaa
     2281 gcagtttgag gattaccggc ggcaaaagga taagagaaca tcgcaaggaa cgagttgtca
     2341 acaaaaagaa tgtcctggtc accgatcttt tttgtgttgt acgagactat tccttttccc
     2401 catggttcga ctcttgcatg attcaccact tcgggaaaat catcctgcat ggctttgcca
     2461 atgcctgaat aagtgatggt accgtgctgc accagtttgc cctcctggta ccgatcgttg
     2521 gacacacgat aaatgtctgc cgcatgttca ttgaactggt cgtagcttaa ttcaaagctc
     2581 acgtattgca agatcagcag gcatgcagcc atgccaattg aaaggccaat aatgttgatg
     2641 aaagaaaaga ctttgttctt catcaaattg cgccatgcgg ctctgaaata gttacgaaac
     2701 atcggtggat gatttacgat ttatgattta cgatgtacaa ttgcagattg gcgattgcgg
     2761 atttcagatt ttaattccgt cctaattcct aaatcctaat tcccaattcc caattcccct
     2821 tactcttccc tcaatcccct caccgggttt aacaaggctg ctcttaatgt ttgtgagccg
     2881 atggttaaca tcgacagcaa aacaattatg atcacgccgg gaataaataa accgacgctt
     2941 aacgatatgc gctgactcat ctgctgtaat atcagattgc ccagcagcac acctaccggg
     3001 atcgcgatca aaacggcgat caccatcacc tgcaaatacg atcttgataa tagccgaacc
     3061 aatgatgcgg gcgttgcgcc gatcactttc ctgatactta tttctttcgt ctttgactga
     3121 atggtaaaaa tggttattcc gagcaaaccg agacacgcaa ttgttacgcc gatgatgccg
     3181 atgcaagcaa tgatccaaac cgcatcacgc atgtcggcga atatctcctg aatgctatcc
     3241 tcatagaatt ttccttcgaa tgcatgatat ggatcaagtt tgttccaggc cgcctccaat
     3301 tgcgcagttg tttgcatcgt atttgcggat gcgatattga gattaagtat cgaccatttc
     3361 gcaggatcat accgaagtaa cataggttcg agcgcatatt ctgcgggctt gaacaaaaaa
     3421 tctttcagca cgccggttat aataagcatc gtgctatcac cgaccatgat cgtttttccg
     3481 attgcatcca tgggcgttcc gagctggaaa tgctttacga agttttcatt gactattgca
     3541 tactgttcgc gcttctgcgc agtgtttgac ggaaaattct ttccggcgac taacttcaaa
     3601 ttgaaattgc tgagataatt ttcatcaacg aaataatcgc ggactgttac cgggtctttt
     3661 tctttgctgg tgcgtacatc atcagcccaa tcactgtacg tgcccataag cactgataca
     3721 gcggagatct tttcaacccc ggctattttg ctgaattcct gttttgcttt tgcataatcc
     3781 attccctgca gaggaatatt gaaaatgtgc gtttgccggg aaccaaaatt tatgttgatg
     3841 ccgtattgca tttgcttgta agtgatcacc acgatattga taaaaaccaa cgagatcatg
     3901 aattgaatta ccagcaaagt ttttcgcaaa ccgaggtgcc gaaacacctt aagactttgc
     3961 agtttctgca tgagcatcag cggttttacc cgcgacaaca cggtcgcagg taacagcccg
     4021 gcgatcaaac caagaatggt cgcaaacgca ataaaaagca gcagaacagc agcgtctgtt
     4081 ttaaaactta tgtctgcctg gttaataaat tcaatcctgg aaaactgtgg tatcaaaaat
     4141 tggagaaaaa cgaatgcgat cacaagtgca agcaatgatg tgatcacaga ctcgaccact
     4201 atctgcagaa aaatatctct tcgtgaactt ccaactactt ttcgcatggc gatctctttc
     4261 atgcgactca ttgcctttgc gatcgttaga ttggtataat tgaaagcagc gcacataatt
     4321 ataataaacg caagaaggcc gaagaaccaa agtatggtgg atggtagtgc gttgcccata
     4381 ccattgctga ggatcggtcc gggcgtgatc ttatttaacg gctgaagtac aaaacggtat
     4441 ccggcgtccc tggtttcaag cggcagatct ttgtaatttt ctttttcaat cttgtcaagc
     4501 gccgcttcaa cctgtgatga cttcacgcct ggcttcaaac ggatgtaagt atagtttgaa
     4561 taatagttgt tccagttggt taatgtggga aagatcgaat ttgttttttc gagagagggt
     4621 atcgtagaaa aggagccgag cgcttcaaac tggaaatgcg ttttacccgg aaaagcattc
     4681 aacacaccgg tcaccttgaa aaggcccgtg cccgctacgt caactgtttt accaatcgca
     4741 tctgcgtttg gaaatagttt ctcactcaac tcttttgtaa gtacgatgct gaatggttca
     4801 tttaaagccg tcgatgcatt tcctgtttga agggtaaagc caaacatttc aaagaatgat
     4861 gcattcgtga aatgcatgct gaagctgaat tttctgtcgt ccgcagagac gtcggcgttg
     4921 acgccggtat tgaacatcgt ccatcgctca acaccgggga atgttgaagc aagtgttgca
     4981 ccaacgacgt acggtgaaga agcgtacggc tccgagcctc catctttgcg aatggcctcg
     5041 gtgtttatac gatataccct gtcgctgttt ggatgaaaat tgtcatattc atttgcgtcc
     5101 tttataatca tgatcagtaa aaggcaaaca gccatgctca atgcaagacc ggcaatattg
     5161 ataaacgaaa aagatttgtt cttccaaaaa taccgcaggg ccgtgattat ataatttcga
     5221 aacatgcgac ttgatattta taaattacga ttcacgattg cagactggcg attgcagatt
     5281 gcagattgat tcaccatcca acttcattac tcattattcg tttactcatt actcattact
     5341 cattactcat tactcagtat tcatttattc attactcatt actcattatt catttattca
     5401 ttactcatta ttcattttgt acgtcattcc gttctcaacg acttcaccgg gttcgccacc
     5461 gccgatcgta tcgcctggaa actgatcgta acaaaagcaa ttaccatcgc gaggaaaact
     5521 gctgcaacga atatccacca gcttatgtcg atcctgtacg cgtaatcctg cagccatttg
     5581 tacacactga accatgccag tggccacgcg ataatggctg cgatcaaaac atacttcaaa
     5641 aaatctttcg acaacatcgc aactatgttt tgaactgatg cgcctaatac tttgcgtatc
     5701 cctacttcct ttaatcttct ttctgcagaa taagaagcga ggccgaacaa gccgagacac
     5761 gaaatgatga tagcaagcac ggcaagcacg ccaacgatcg agctcacctg tgaatctgcg
     5821 cggtacacgt cggcaaaatg atcatccagg aactggtatt cgaaaggagt atccggacaa
     5881 ttcctttgcc aaacagactg gatgaatgca agcgcgtctt ttgctttact gccatttatt
     5941 ttcaccgaga tattgctcag tccccaatcc ttctgattga acatgaacat cgtttcaatc
     6001 ttatagtgca gcgaattgaa attgaaatct ttcgcaatgc cgatgatcgt gcctagtgaa
     6061 tcgaagccga aagtttttcc aagcaagaaa gacatgggct tcttaggatc atctttcaat
     6121 aactctttag cgagtgcttc gttgatgatg tactcttttc cctgttcctg cgggtccgct
     6181 gaaaagtttc tgccgagaac gatcggtatc ttgaataacg tgagataatc atggtcaacg
     6241 atcaaacgcg tggacgtgag ctcgcgcttc gggccatcgc cacgaaactc gatgccggat
     6301 tgatcgaggt gacttcctaa aacatcctgt gaacctgaca cagcggttac taaagtgctt
     6361 ttcaacaagt cctgttttat aacatcaaat tttcgggacg tgacaccatc gagcgggatc
     6421 gtaactacct ggtcacggtt gaagcctggg tcacgatgtt gcataaagtt tagctgcttt
     6481 actgcgaaaa tcgttgcgat cattaaaaag atagcgctgg aaaactgggc tacaaccaaa
     6541 acatttctaa gcgccccttt gttctttccg gtttgaattg aacctttcaa aacttttaca
     6601 ggctggaatg atgataaata tcctgctggg tataagccag ataatatacc tatgagaatt
     6661 gttccgccca caactgatat aaaaagcggc gcactggtca gtaaggggaa tgttaactcg
     6721 cgttgactaa gctggttcac ccacggcagc gccagctcaa ccaggccgat cgcgagcaac
     6781 agcgcgatca gtgcaaggat gacagactcg ctgatgaact gtgtcgacaa ttgccagcga
     6841 tacgctccaa ctgattttcg aatgcctact tctcgtgctc tttccgccga acgtgcagta
     6901 gacaaattca tgaaattgat gcaggcaata agcaacacaa cgatcgcgat cccaaaaaat
     6961 atgtttgtat agttcttatc gaatttctga tagttgagat aatccaaccc aatgtctgtt
     7021 gcatttgcat gtacgtcggt tagaggcaac aaaaaaagct cataaaattt ccatctatcc
     7081 tcttctgcaa ggtatttctt caaatagccg ggaaactttt tttcaagggc ggcgacattt
     7141 gtattaggcg ccagttcaaa ataagtgtcg agccagttac cgccccagtt atcaaacatc
     7201 catggctgat agatggaact aaaagaatac aacgcgtcaa attgcagttg agaattttgc
     7261 ggaacgtttt gcagtacgcc ggtaacaaca aaacttgttg tatcgccacc gtagtgagta
     7321 attgtttttc cgatcgggtc ttgtttgcca aacaatttct gcgcgcttgc ttgcgtaagg
     7381 atcgcgctgt tcggtttttg caaagctgtt gcccgattac cctcgagcag tttgaaatcg
     7441 aatagttgca ggaaagttga atcgacgaaa taagattcac tgaaaaagat cctcttttcg
     7501 cccgccgtca tttcgtattt gccggtccag tgtatgcgcg tgaaattttt tatttcagga
     7561 aactccttgt ttagagtcgg ccccatcggg aacatcgaca aagcaacttt ttgagaagcc
     7621 accattccgg ggaatttttg cacttcattg agccggtaaa tatttttcgt atgtaattcg
     7681 tcgaaactgc gctcgtaaga aacgaatagc atgatgatga tgcacacaga cattccgatg
     7741 gcaagcccga caatattgat cgcggaaaaa gtcttgttct ttaataaatt ccgcagcgcg
     7801 gttttaaaat aattacgaaa cattttgatt tacgatttac gatttacaat tgcagattgg
     7861 cgatttcaga ttgcagattt tgacctactc attactcatt actcatttga tcattccgtg
     7921 cgcaagctat tcaccgggtt tgccaccgcc gcttttatcg cctggaagct cacggtgatc
     7981 agcgcaataa aaatggcaat gcaacctgca aacgcaaaca tccaccacct gatctcaatc
     8041 ctgtacgcaa atgcctgcaa ccacttgctc atggcccacc atgcaactgg agtagctatc
     8101 agaattgcga tgcctaccag ctttaaaaaa tcctttgaca acaatccaac cactcccggt
     8161 acgcttgcac cgagaacttt tcgcacacct atttcctttt ttctttgttc tgcgctgaat
     8221 gcagccaacc caaataatcc aaggcatgag atcaggatcg ccattatcgt gaacgagttg
     8281 atgatctttg ataatgtgat ctccgtttca tactgctttt gaacttcctg gtcgagaaac
     8341 ttatagtcga aaggagcgga aggaaaatcc ttatgccaca atgcttcaat ttttgaaagt
     8401 agtgcctggt aatttttgct gtctgttgca accgtgagat ttgacatgta gggctgcggc
     8461 tcgctgtata taaacatcaa tggtttcact tcatcgtgaa gagaattgaa attgaaatcc
     8521 ttcattacgc cagcgatctc acgatggaat tccggtactc ccggaaactg tgtatacaat
     8581 tttgttcccg gtgcctgttc gggttttaac ccaagacgct ttagtactgt ttcattgacc
     8641 agcacttttc cagagtcgta taaatgaaaa tccctgccgc ttattatttt gatgccattt
     8701 gctttcacaa aatgctcgtc tgtgctcatg ttttgcacgt cagtggcgtt agttggactt
     8761 ccaccggcga gataaacggg atagtcgttg aacaccacct ggctgagata attatttgcg
     8821 cggccaactt cttttacttc cgccaactgc ctgagatcag tggcaaaccc atcgatcttt
     8881 ttgcgcgtat catcagtgta aaaactaaag acgagtttct ggttcttatc aaagccgagg
     8941 tctttatgct ggatataatt tagctggcta tagatcacaa tgataccagc gatcattacg
     9001 atcgacaaca caaattggaa tactacaagc gaacgacgga tgccggttgc agaaatatga
     9061 ttcgtgaaat ttcccttgat cactttaatg gcctcaaatg cggataagta aaatgccgga
     9121 tagctgcctg ccaccaggcc cgttgcgccg ataattcctc caagcaacaa ccatatgcgg
     9181 tagttcgaaa acatagagac acgaatgtct gcctgtgtaa cttcgtttag cagcggaagt
     9241 gcgagtaaca ataacggcaa tgctatcaat acgctgataa gagacaataa aaaagattca
     9301 ctcataaatt gcctcatcag gtcagatcgt tcggccccaa cgacctttct tatgccgact
     9361 tcctttgccc ttttggatgc acgtgcagta gaaaggttca tgaagttgat gcacgcaatt
     9421 acttgtatca gcaccgctat caataatagg atatacagga aagacggatc aacgcttttt
     9481 gacaattcat gctcataacc cgtagtagtg tgtatggaag taagaggttg cagatgtaat
     9541 gttttttgca tgccaatgtc tttcagttgt tgacctccat acttgttcag aaaagcgggt
     9601 aacttttttt caagcgccgc agcatcagca tcaggacgca gcttaatata ggaaaaggtt
     9661 aaattgtttc ctgcccaact atcgttttgg cgtacaaatt cgcccatacc tccgctgttc
     9721 atcgtgataa acatgttagc ctcaaggtga gatttgccaa ggctttcatc aacaacgcct
     9781 gttattttgt agtcgtgctt gccgttgtta tcatcgatct cgatcacttt gcccactgcg
     9841 tcttcgctgc caaacaattt ctctgcagta gtgtttaaca gtactaaaga atacggttcc
     9901 gataatacat ctttcgcatt tccgcttgtg aagtgatagg tgaacacgtc gaaaaaagta
     9961 gaatcaacat aaagtggttt gtcctcgtaa atcaattttt cgttgtaacg aagcaaatgt
    10021 ttacctgcat tgaaatcgga gacgacccgg gtgaattgtt ccacttccgg aaaatcccgc
    10081 ttaatagcag gcgcaatagg cggcgaacat gttgaaatat tatgcttgtc gccgggcagc
    10141 gttagctggc tggtcacgcg ataaatatct gctgcattgt tttcgtgctt gtcataacca
    10201 aactggtcct ctacgtaaag caaaatgtat aagcagcaaa gtgttcccgt agcgaggccg
    10261 atgatgttaa tgaaactgaa acttttgttt ttcagcaaga accgaaacgc ggttttcaga
    10321 taatttttaa acataacgaa tcattttacg atttacgatt taggatttgg gatttaccgt
    10381 gcacaattcg ccaattcatc actcattatt cattactcat ctcgtcattc cgttctcagc
    10441 aattttaccg ggcttgtctt tatcacctgc caaactttta ttcctgttgt gatccccgtt
    10501 attgcgaata atgcaaccac cgatcctgtt aatgtggatg tactcacacc cacattgacc
    10561 ttaaatatca tatcgagcaa aagttttgtc agtgcccagc cgccgtaaca acccaggccg
    10621 cccgcgataa gaaatatcca gaaatatcct ttgttgacga gcatgagaat atgcctgggc
    10681 gttgcgccta ccacttttcg caatgcgatc tcccgcatct ttttcaacac cgtgagagat
    10741 acgagagcga acaggcctgt tgcagtgagt aatacggata caatgccgaa ccaaaagaat
    10801 atttgggcaa tgctcttgct tgtgcgatac ccttccgctg taacttcatt ttgatagaat
    10861 ccattgaacg gcatcaatgg aaaaagtttt gcccaggccg cttttgtttt gttatagaca
    10921 gtcgtcagat tttccgggcg cgcctgcacg ataagatact ggcaccggtc ttcttttgaa
    10981 agtttcattg ccacaggttt cacaggatcg aataatccgg tgctaagaaa atctttcagc
    11041 acgccaatta ctgtatagtt tatggaatca atatggatct gcttacccaa tgcctgctta
    11101 tccgtccaac cgtacatcgc agccatgttc tcggtgatca ttagcgcatc cttataatca
    11161 gactccatct gcgggtcaaa cggtctgcct gcaactgtcc tcaaattcat tacctgtaaa
    11221 taacccgatc cggtttcaaa atagttggtt tcttttttaa cgccttcggc ttcggcaacc
    11281 gcatttcgaa atccaaatgc tatatgatgc cttgtgccgg ccacgccggt aacttccggg
    11341 atcctctcta tttcgttttt gaaggcagca aatttttgag ggtcagtgaa tgaaacaccc
    11401 attatgttct caagattata accgtaatca tatgtttttt gaaactctga attttttgca
    11461 aacgcgatcg ctgctattac tgtaatgatc gcaatggaga gctgcaaacc gagcatcaaa
    11521 cgggagaaca aattggagcc gccgaatttt atgttcccgc gaaaaatgct tgatgcatta
    11581 aacctgctta catagaacgc cgggtaagcg cccgcgagca aagaagtgga gatcagcatg
    11641 atgccgacaa acagaagtaa tgaagggtcg tccaggtaat ttgcctctac atgcacacca
    11701 ttgaacatgc tgttaaaaaa aggaagccac catttgttaa acagcatcga taagaatatg
    11761 gctacgacca cgatggctga acattcgagg atcatttgaa acacgagctg gctaaaactg
    11821 ctgcccatca ccttgcggac cccgatctcc ttaagtcttt tattcgaacg ggcaacagtg
    11881 gtgtttgaga aattgaggca agccgacaaa aatatcagga acgccagcac gaacgggccg
    11941 tatgtcgcag aatcttccgg gcgatcatac aagccattat tgtctatgaa atcacttttg
    12001 gtcgcttgtt cccgcagcga catcatttca aagccagagg ctttccagtc ttctcgcgcc
    12061 ttgttttgca aaggcaaata ttgtttgagt ttttcagcga ccgtaattgc atctgcatgg
    12121 tttggaattt tgaaaaacgc agcatccagg aaccatgtcc agtcatccgg taaaatttta
    12181 cttccgtccg gcttcaactg gttgtcaaaa tttgtaagga tcccaaatcg catggaagaa
    12241 ttcatcggta tatctttcaa cacgcccttt acggtaaggg gccttgcgta agattcgccc
    12301 gcataaaaca gcagcgtttt accaacagca tcttctttgc cgaaatattt ctttgcgata
    12361 gattcggtga tcaaaacggc atcgaggtcg gcgatattat ttgatccttt tacaagtgga
    12421 aaattaaata gctggaaaaa tccgggatct gtaaaataaa cctgttcggt gaaaggctca
    12481 gtttgctttg ctttcaaatt cattccacgg ctgtcatatc gcaccgcatt ttcaatgccc
    12541 ggcacatcgt tttttgctgc tgccaccaat ggcattggga aaataccttt cacgcggtcg
    12601 gcgccatctt tgaaagtaag tgcccgatat acattgtcgc ggtcaggctg aaaattatcc
    12661 caactaaaac taaatctata atcctggaat gcccacacca tggcggcaat accgacggcc
    12721 agcccgagaa tattgatgac cgtgtaagtc ttatcacgcc acaaattgcg tagagcgatc
    12781 ttgaaataat ttttaaacat aagagagaat tttgatgtat gatgtgtgat gtctgatctc
    12841 tgatttaagg atctctgatt tcataaaaaa tccaattcgc aattcaaaat gtttatgcgc
    12901 cttcttgacg ctgtgttccg tgatgcgcat cgttacctga atttgattca gggctattta
    12961 tattgaagtc cttcggactt ttcgcccatt caccatccct ccgatcatca acagatacaa
    13021 ttcaccattg acaattcaca attcaccatt cattcatttc tcaaattctt caccgggttg
    13081 gtcaacgctg ctcttatcga ctgatacaac accgttgaca tggcaatcac caggatcaac
    13141 aaaaacggca gcacaaaaaa ccagagcccg atagaaatat gaaaagcata atcatttaac
    13201 cagttctgca acaaaaaata cgcaagagga atggctatca gacccgcgta tacgatcagc
    13261 ttcacataat cctttgtgat gagaccggtg atctgcagca ctgttgcgcc caacacttta
    13321 cgcaagctta tttctttcgt ccgttttgca actgtatata aggaaagacc aaataatcca
    13381 agactcgcaa taatgatcgc aagcagcgta aacaaccaaa gtatcgttga gaacaattgg
    13441 tcattccggt actgttcatt aaaatgttcg tcgaggaaga aaaaggtaaa cgggctggca
    13501 ggaaatcttt tattccaaac ttgcttcact tgtgcaatca cctgctgtaa attggacgta
    13561 tttaatttca gcgaataact gctcatgttt atttcctgct cagggtaaaa gacgatcggg
    13621 tcgtaattgt attgtaatga ttgttgatga taatcgtgca gtacgccaac gatcgtgcaa
    13681 tcgtacccgg ctccatgcaa cattttgcca atagcgtctt gcgctgaatt gaagccaaat
    13741 atttttgccg ccgtttcatt cacgatcagg cttaatacct ggtttgtatc tgaactggct
    13801 ggcttgtcct tgtcaaaatt tcttccggcg gcgagtgaaa gcccatagtt tggaataaat
    13861 ttttcgtcga tgccaaagat gcggcagcgc tttccttcgt tagatgacat tacccgaaaa
    13921 tccgtcgatg accccacttc acttcccggg acatctgtgg aactcgagat cgcctgaacg
    13981 ccgggaatac tttgaagatc gttgaggaag gattgtacag atggtatttt gccgctgtcc
    14041 acattcgctg tttgttgtaa taccaacgtc tgtttgatgt ttacgccgag atcgcgtgta
    14101 ctcataaatt gcaattgccg ataaaaacca attgcaccgc cgatcaaaat aattgccgcc
    14161 gtgaattgca cgacgacaag cgatttgcga aagaaattgc ggctctgcct agcagtgcca
    14221 aaaccagcaa ttgactttag ggattgaacg ggctgaaacg aggaaagaat gaaggcagga
    14281 taaaagccag caagtaaggt gctgcttaca aatacgatca gcatcacaac ccaaaattgc
    14341 caggttgcgg tttgcaggtc ggtaacattt tggccaatca acaatgagaa ctgcgacaat
    14401 gcaagtttga acaatacaaa cccgatgatt attccgaagg cattcatcaa aaatgtttcc
    14461 gcgagaaact gccgcaccaa ctgcattttt gtagcaccaa taacttttcg cactcccact
    14521 tcttttgacc gttcaagcga atgcgccgtg gagagattta tataattgat caatgcaata
    14581 agcaggatga ataaggcagc aatgccgaga tatttcaaat agtagagatc accgctgccg
    14641 gccatttcat aatcgtaccg cgaacgcgtg tgaatatctt tcaaaggctg gatttcaaaa
    14701 gatacggtgt aaccattctt tttcatgtca tcacccatat accgctgggc aaatacaggc
    14761 atcttcgact gtaaagcatg ggcattagct cccggtctta aaagaagata cgtgtagaaa
    14821 tcactccagc cccaactcgt atttgcatcg ccatttgtta gctggatata tttattatag
    14881 ttaagcagaa tgtgaaactg caaatgcgaa tttgcaggaa catctttcaa caaagccgtt
    14941 acaacatagt cctcatcatt atagtgcagg gttttaccga tcgggtcttc attcccaaaa
    15001 tattttatgg ctgttgaatg ggtgatgact gcatcattaa gttgcgcaaa agccgtcgcg
    15061 gcagaacctt tctcgaactt gaatgaaaaa accttgaaca cagccggatc gacaaaatag
    15121 atcgtgcctc cttcaataat tttctgatcc ccatgctgca caatgcccga tcttcttctg
    15181 aaacggacca cctcctgtac ctccggaaaa tcctttttca ttgcaggtgc tacggctgga
    15241 tatgtaaaag caaacgtttg aggattgcca tccgtttcag ttaccgtcat cggcacacga
    15301 tacatgcggt ctttgttcgt gttgaagtca tcaaagctgt attcgaaacg cagataattt
    15361 acaataagta agaaagccgc gatgccaatc cccagcccta aaacgttgat agcggaaaaa
    15421 gttttattcc ttagcaggtt tcgccatgcg gttttaaaat aattgttgaa cattctttct
    15481 atttacgaag aaccatttgc gatttacgat tgcagatcgg cgattgcaga ttcacaactc
    15541 acaattcaca attcaccatt cacattactc atcattcatg ctgtggacat tattcactgc
    15601 gcaatgccgc gaccgggttc gacatagctg cccttattgc ctggtacgaa acggttatta
    15661 acgcaataat acatgccgat agccctgcca ccgcaaaaac ccaccactca atatttatat
    15721 ggtacgcata ctcctgtagc cacctgcttg ttgcccacca tgcgacagga aaagcgatga
    15781 tatttgcgat taggaccagc ttcaaaaaat cttttgaaag caacgaagcc agtccggcaa
    15841 cagttgcgcc cagcactttt cttactccga tttcttttat tctttgttca gcagaataag
    15901 ttgctaagcc gaagagcccg agacatgcaa taaatatcgt tgcaagtgcg gcccaaatga
    15961 gaattgtttg gtggcgggcg tcttctatgt aaaacaatgc aagctgatca tctaagaagt
    16021 gatactcaaa aggatcatcc ttgtcattat ttaccattac ttgttttagc ttttccaggg
    16081 ttccgccaat atcgttagac gctatcctgc atgaataata atcgatcacc tgtatcgggt
    16141 tttgattata tccgaggatc aacggtgcga tcttatcacg cagcgactga aagtgaaaat
    16201 ctttcacgat accgatcacc cttggcttga atggaacatt ctcatcgttg aatgttgtga
    16261 aggtgccacc attttcagac atcgctggaa tttcaatcag ctggcccgca gcctgcgtga
    16321 tgcccagcat ttttgcagcc gtctcattaa caataacggt tgatgaatct gccggtgtat
    16381 cgaagtttct gccgtttaac aaatgcacct ggaaagtctt caaaaagtct ttgtcggcgc
    16441 cgaacatgta agcgacgtca ggctcaccgg tacttcccgc gttttttacc ttaacggtgc
    16501 gaaatgactt ccactcgccg ggcacccttg atgtaaccga tacgttttta acagtgggta
    16561 tctttgccat ctccgttttt accgcctgaa aatttgccct ggctttaccg gtattcacat
    16621 caattacaac aagcagatct ttattgaagc cgagatctgt attgttcatg taatggactt
    16681 gcataaagat gacgattgtc gcaataatca ttacaaccga tattgtaaac tgaaatatta
    16741 ccaatgtttt tctcaatgat aaaccggttg cattttgaat cttcaacccc cttaacaata
    16801 aaaccggttt aaaacgggaa agcatgagag cagggtaact ccccgataaa aaagccatca
    16861 gggccacaaa agcaatcgca tagacccaaa ttcgataatc tgtagagaag tcaagtgaaa
    16921 gctgcttgtt cgtaaattga ttgaatgcag gcagcacaag attcacaacg atcaaagaca
    16981 ataagaacga aatgaatgtt acgagtaatg attcgaataa aaattgccgg atcaaatggc
    17041 ttcggtctgc gccgatggtt ttgcggacac caatttcttt taaacggctc gaagccctgg
    17101 cggtggtaag gttcatgtaa ttgatgcccg cgatcaccaa aacaaaaaga gcgatgagcg
    17161 aaaacacctt aatataaaac atgctccctt ttactatcgg gtcaacattc gagttgcggg
    17221 cgccatcagt aatattttcg gagttaagat ggatgtcctt taacggctgc aggttaaatg
    17281 aaaccatcgt gccggcaggc ggattaacat tcgcatgtac caactttgac atttcgtctc
    17341 cgattcgggc cgggtcggtg ttgggtctca gcaatacata gacagagaag ttctcagata
    17401 accaatcact cgcccagaat tgtttaaaga attcatcatt ctgaaatgac gcctcagaca
    17461 ttactgagct aaagtcaaaa gttgaatttt tcggatgatc ttttaaaaca ccagttacct
    17521 tcaatggcga ttccatgaaa ctaaactgca ggctctttcc gagcacgtct gttgaattga
    17581 acaatctcaa tgcaagggcc cgggtaatga taatggagtt cggttgcttc agcgccgttg
    17641 ttctatctcc cgaaagcagc ggaaaatcaa atatgctgag caactgttca tcagcaactg
    17701 taaccgtttc ctggaaaaag ttggccgggt tttcaggatt caggatgtta gccctgccca
    17761 gcctttgaat ccgcgtagtg ttttctacgc cggtaatttt tttctttgat tcttccgcaa
    17821 gtttgtaagc cgccgccgcg atcgtcgtcg attcaccatt tactgttttt tgttcgatga
    17881 ccctgtatat cctgtctcca ttcttatgtt gcgtgtcgaa cgttagctca tcaaacaggt
    17941 acagccctat cagcaaaaaa caactaaggc caaatgtgag cccagcgaca ttcagcgccg
    18001 tgtatagttt gttacggatg agtgtcctga acgctgtttt gaaataatta taaaacattc
    18061 tttcttattt acgaagtacg atttacgatt tacgatggca gatcggcgat tgcagatcca
    18121 caattcacaa ttcacaattg acattactca tcattcatca ctcattactc attcttgtca
    18181 ttccgttctt aaactgttca ccgggttggc catcgccgcg cgcactgcat gaaagccgac
    18241 cgtgaacagg gcaataacga cagcaacaat gccggtcaga agaaatatcc atccactaac
    18301 actgatgcga tacgcaaaat cctgtaacca cttgttcatg aaataccagg caaatggggt
    18361 agcaataagc agcgcgatca atacgagctt taaaaaatct tttgcgagta attgtatgat
    18421 gaccggcaat gttgccccta gcactttcct gatcccaatt tccttggtac gattcacaac
    18481 cgccagcgaa gccagtccaa acaagccaag gcaggcgaga aaaacagaaa cgcctcctgc
    18541 ccatccgatg atgctactcc attttctttc agctttataa aaattatcga gattctcatc
    18601 aagaaaactg taacggaacg gaagatctgc aacgaggccc ttccatgttg attgcatggc
    18661 cgctaatgct ggtgctggat tgcccggctt gattcgaaca aagaatttga acggcgtgta
    18721 atcgctgaat tgatggaaca tctgcggcat tattttttcg ctgaaaggac gatagttaaa
    18781 atctttcacc acgcctatga ctacaggtgt ttttgattcc atataaccag ttagtttttg
    18841 cccaacagca ttttgaattg tccagccaaa gtctttcacc attgtttcat tcacaatcac
    18901 agaagtaacg gtgtcatcag caatgcgcgg atcgaaattt cttcctgcaa gtaattgcat
    18961 gcccatgacg ggaatgtagt ccgcgtcaac aaaatattca tacacgtcct tatgggtacc
    19021 cttgtactca aatcccgagc ggctccaacc ttcattttct cctaacccca actcggcgct
    19081 gctcatcccc gcgatatccc ctctcgacag caatgcctgt ttaaacaaag gatatatctc
    19141 tttcgttttt gtgtcgctcg catcaactac aacgacattc tctttgttga agcccggatt
    19201 tttgctagcc atgtaatttg tttgctgcag tataatggct gtgctgatga tcaaaccaat
    19261 tgacaaagca aactgcacgg tgaccaatgt ttttgtaaac agattcgagc cgtgcaccct
    19321 gatcttactt ttcaatactt ccaccggttt gaaggatgac aatatgaacg cgggatagct
    19381 gcctgcgagc aatccaacaa gcagtatcaa gccggcaagc atccaggcca tttccgggta
    19441 ttgcgaaaac gagaaatcaa gatcgcggcc ggataaacca ttgaaaaacg gaagcagcaa
    19501 tttggcgaat gccaaaccga gtgctgcaga gagaatagta agtatgatcg cttccgaaag
    19561 aaattgtgtc actagctgcc tgcgctcacc accgatcacc tttctaacgc cgacctcttt
    19621 tgcccgtctt gcagacctgc caattgcgag tgtcgtgaag ttgatgcagg cgatcaacaa
    19681 aacgcccgcc gcaatgctca gcaatatcca tatcgtttgc ggatttacat tgtcaacaat
    19741 accgccgtag atcttcgtgt ccgtgtgtcc cgccctcaat ggctgcaggc caaaacgaac
    19801 aggcggcgca gaacctgtcc atttgaatcc tgattgcttt aggtcagctt cctcggttgg
    19861 gtaatatttt ttgcgaaaag atgcaagccg gcttacatca cctggtaaac cgctaccggg
    19921 gtttagctgt acatacgtaa tgtacgatga ccggttccaa ttgttcactc ccctggtgcc
    19981 tgaacttgtt gtttcaaaat agttgaagtt tccgagcagc tcaaagcgaa tggatgaatt
    20041 tgcaggaata ttttcggtaa ccgctgtgat ggtgaaaggc acgaaatcct cctccgtttt
    20101 tacctgcatc gttcgtccaa caacattgtc cgtaccaaaa agatcttttg ctgcttgttg
    20161 cgtgatgata accgatcttg gatcctgcaa tgcatttttg gcgccgtact taagcggaaa
    20221 agaaaaaaca gaaagcacag aaggatcagc aaaagacatc ttcttacgtt ttacctggcc
    20281 atcgatcttt ataaaacttt cctgccatgc atctctgaaa cgaacataat tcactacgtc
    20341 gggcatatcc ctttttagcg ctggcccgag tggtgaaggc atataaacat cgccttccgc
    20401 ctcttgtccg ttcatgggtt ctgtccatcg gtagaggcga aaaatattat cagcgttagt
    20461 atgaaaacgg tcgaaactaa attcattcac cgcgtataaa agaaacagcg aaaagcacgc
    20521 aaggcccagc gacagaccga tgatattgat caacgacaat actttctgcc ggcccaggtt
    20581 tcgcaacgcg atcttgaaat aatgtttgat catttttcgg atttacgaat tacgatttac
    20641 gatttacaat ttgaacattc attcacaatt caccattgac gattgacaaa tctgatcact
    20701 catcactcat cactcgtcac tccgtgcgca acgatttcac gggatttgcc attgctgctt
    20761 tgatcgcctg gaaactgatc gtgaacagtg caacgaggat cacgaccgct cctgccaatc
    20821 caaacatcca ccaggccata ttaattcgat acgcaaaatt ttgcagccac ttatttgtga
    20881 aataataccc ggctggaact gcgataacaa atgctattga aatcagtatg acgaaatccc
    20941 tggaaatgag cacaacaatt tttgccacag ccgcaccaag cactttgcgt ataccgatct
    21001 ctttcgtgcg ttgctgtatc gacagaatta ccaggccgag taaaccaatg cacgaaatga
    21061 aaatgaacag tgccgacgca atgccgatga tctgtttcca ttttgtttct gcctcatagt
    21121 tcttcgcatt gatatcatcc atgaagtcat atgagtacgg gtagtatggc aatatatttt
    21181 tgaaagtttc ccgcaacagg ttcaatgtat gcggcgcgtc tgttggcttt atcttcaccc
    21241 atatctcgcc gaaattgaac gacggttcca tcgtgaaaac ttccggag
//
LOCUS       DASQJI010000218         4624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2324651,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000218 DASQJI010000000
VERSION     DASQJI010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4624
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2324651"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..553
                     /locus_tag="VEV83_06435"
     CDS             125..553
                     /locus_tag="VEV83_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44783.1"
                     /translation="MQKQKPEIDIVNEVLEECVMAYPISSFVIGLYQQYQRRGSLSKK
                     QLEGLHSKASKIETIHPGKLATLEALIKKMRTRYNSEPPQLKPMFEKDKLAGELISSI
                     LQKYPQHKRVLFLSSRYENNETLSALEMDELKRFHQLLNK"
     gene            647..1798
                     /locus_tag="VEV83_06440"
     CDS             647..1798
                     /locus_tag="VEV83_06440"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYK44784.1"
                     /translation="MYFNALIFIVGIGIVQALLLTAVFLSRKKIHPSHILINTYIAII
                     LLQLVFKLVSKVWLLDTWLQAYLISYFLPFLYGPLLLLFALSYTRDEFKWKPQYALHF
                     VPFLVYLGFYFFADPQTYPPPFMMFLLHPITRMVLQLISLITYHLIAFEMATDKKNVN
                     KLALSRRRFLKKLSFISFAVTVCISVTLFFLYTNYPDYQEVRWVFSLLTLFIYWLSYE
                     TFKTPRLFKLIHGNANAGERLRVIPPLVAHSKPVKYYNSGLKGEEVERISAALAKNMD
                     IDKVYLDAELTIEKLSGIISCLKHNLSQVLNQQYHVSFNEFINQKRVAEARKYLSDPN
                     RNHLKIASIAYDCGFNSLSSFNSVFKKLEGSTPSQFRFNSQQHSQIRRV"
     gene            1862..3058
                     /locus_tag="VEV83_06445"
     CDS             1862..3058
                     /locus_tag="VEV83_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44785.1"
                     /translation="MRRLFALLVPFFFLNDRLHAQDVPSEPIIYQVPEMAAVQVKQNI
                     LFKKVNDTSLTLDVYYPPLFDQKTKLPVVIFNNGVGSMTIPLWRVYKDWARLIAAKGM
                     IAINYQARNNNGLEDGASLIDYVRANGTQLNIDTARIAMWTCSANTRVGMRLAMDSTR
                     IFIKSLVVYYGAPDSLGRLRQDLPTLMVRCGLDAQFINMGIENFLQQALMQDMRIELI
                     NYLKGTHAFDITTNTDEARAIIDKTIDFFKENFDKSYAKPGEFVLTNRNFMWLMNSHQ
                     SEKAVAEFRKARGRYRADSTFNPFWNAVIREDVLNANAYWLMQHDRLPEALEAFKLMV
                     ESYPESPNAYDGLGDYYEAAGNKTEAIKNAEICLEKLDKATDLNADFKERVRQSALDK
                     ITRLKQ"
     gene            3097..3981
                     /locus_tag="VEV83_06450"
     CDS             3097..3981
                     /locus_tag="VEV83_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44786.1"
                     /translation="MKKMFPILLFACLHAFAQDSVFFQNAEWSPDGKSICAEIIRKSG
                     ANLRYEGYIIDIHRKTIQRKIPGAVFPAWSADGKTIAYSKRNSSPHGFDIWLMNTQTG
                     DTTRLTNDTVRSSGVTFSPDGKKVCFSSDKGSGRHLFVMNTNGGDVHQVTFDTARYFD
                     PVWAPGGDEIVYYREVGDQRDKIFTLDVKFGKEMKITDDTLHNTYPGWLPGGKTISYT
                     CSIPFSNDESERQTALIDTDGTHKRFVPGTQGSFGCRVSPDGKRIAIIKGRWPQSNIY
                     IVNMDGTNLDCLTCKLFD"
     gene            4097..>4624
                     /locus_tag="VEV83_06455"
     CDS             4097..>4624
                     /locus_tag="VEV83_06455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44787.1"
                     /translation="MEFDNDRPVKRPYRIEILYWILLGLMNPLVSSLTIFLHDAKTWA
                     VVLLINLLVLPAYLFYSMTIVPRFLFQRKYVQFFALSVLFLISLQLVLFSIYSLILKF
                     SLSPAEQSYFTYTDGTIIRENLWSVINMSMAIGIYFIKKALDEKETLENLEKDNANFK
                     LKYLRSQLNPHFLFNT"
BASE COUNT         1335 a          944 c         1020 g         1325 t
ORIGIN      
        1 gattttcttc atagtgttta atttatggtg ttaatttatg gctttttacg agatgcaaag
       61 ttttttttcg acaggcattg cgaattgatc atgtatcaaa agacgtattt tgtggagtcc
      121 ccgtatgcaa aaacaaaaac cagagatcga tattgtaaat gaggtgctgg aagaatgtgt
      181 catggcttat cccatctctt ctttcgttat tggactgtac cagcaatatc aacggcgcgg
      241 aagccttagc aagaaacaac tcgagggatt gcatagcaaa gcatcaaaaa ttgaaacgat
      301 tcatcccggc aaactggcga cactcgaagc gctgataaaa aaaatgcgca cacgttataa
      361 ctctgagccg ccacaactta aacctatgtt tgaaaaagac aagcttgcgg gagaactgat
      421 ctcatccatc ctgcaaaaat acccccagca taaacgggtt ttgtttctca gctccaggta
      481 tgaaaacaac gaaacccttt ccgcattaga aatggatgaa ctaaaaaggt tccaccaact
      541 gctgaacaaa tagttattat ctcggctgaa tagaataatc ccctttggta aaaaattagt
      601 cgtccaactt ttctttttta tgcatcttca actgagatag aaagtcatgt attttaatgc
      661 acttattttt attgtcggta ttggcatagt gcaggcattg ttgctgaccg ctgttttttt
      721 gtcgcggaaa aaaattcatc catcacacat cctcatcaat acatacatcg cgattatact
      781 gttgcagctc gtattcaagc tagttagtaa agtatggctt cttgacacat ggctgcaggc
      841 atatttgatc tcgtactttc taccgttttt atatggcccc ctattgctcc tgttcgcatt
      901 aagctatacg cgcgacgagt tcaaatggaa accacaatac gctttgcatt tcgttccgtt
      961 tcttgtttac ctgggttttt atttttttgc agatccgcag acgtatccgc cgccctttat
     1021 gatgttcctg cttcatccca tcacaagaat ggttttgcaa cttataagcc tgatcactta
     1081 ccatctcatt gctttcgaaa tggcgaccga caagaaaaat gtaaataagc tagcgttgtc
     1141 aaggcgacgt ttcctaaaaa agctttcttt catttcgttc gctgttaccg tttgcatctc
     1201 ggtcacttta tttttcctgt acacaaacta tccggattac caggaagtaa gatgggtgtt
     1261 cagtttgctc acgctgttca tttattggtt gagttatgag acttttaaaa caccaagatt
     1321 attcaaactc attcatggca atgccaatgc tggcgagcgc cttcgtgtaa ttccaccttt
     1381 ggtagcgcat agcaaaccgg tgaaatatta taactcaggc cttaaagggg aagaagtgga
     1441 aagaatatca gcagccctcg caaagaacat ggatattgat aaggtttacc tggacgctga
     1501 attgacgatc gaaaaattgt caggcatcat ttcatgcctg aagcacaatc tctcgcaggt
     1561 tctgaatcag caataccatg tatcatttaa tgaatttatt aatcagaaga gagtagccga
     1621 agcgcggaag tatttatcag acccaaatcg caatcatctt aagatcgcgt ctatcgcgta
     1681 cgattgcggt ttcaattcgc tctcctcatt caatagtgtc tttaagaagc tggaaggatc
     1741 aactccttca caattcaggt tcaattcgca gcaacattcg cagatccgcc gcgtgtagta
     1801 atagtcttat cggattggta ggaagtcgcc gggttaatca cttactttat ttcaaaaagc
     1861 aatgagacga ttgtttgcac tgttagtgcc attctttttt ctgaatgatc gtttgcacgc
     1921 ccaggatgtg ccttcagagc cgatcattta ccaggttcct gaaatggctg ccgttcaggt
     1981 aaaacaaaat attcttttca aaaaagtaaa tgacacgtcg ttaacactgg atgtttatta
     2041 tccaccctta tttgaccaaa agaccaagtt gccggtcgtg atctttaata atggcgtggg
     2101 ttcaatgacg atccccctat ggcgcgtgta taaagattgg gcaaggttga tcgccgcaaa
     2161 aggaatgatt gccataaact accaggcaag gaataataat ggccttgaag acggtgcatc
     2221 cttaatagat tatgtgcggg cgaatggaac acagctgaat attgatacag cgaggatcgc
     2281 tatgtggacc tgttctgcga acacaagggt aggtatgcga ctggccatgg actcaacgcg
     2341 aatatttatt aaaagcctcg ttgtgtatta tggcgctccc gatagtttgg gaagattaag
     2401 gcaagacctc ccaacgttga tggtgcgttg cggattggat gcgcagttca taaatatggg
     2461 gatcgagaat tttttgcaac aggcattaat gcaggacatg cgcatagaac tcatcaacta
     2521 tctaaaaggc acacatgcat tcgacataac aacgaacacc gacgaagctc gggcgatcat
     2581 tgataaaacg attgactttt ttaaagagaa ttttgacaag tcatatgcaa aaccgggcga
     2641 gtttgtttta acgaacagaa attttatgtg gctgatgaat tcgcatcaat cagaaaaagc
     2701 ggttgctgaa ttccggaagg cacggggcag gtatcgcgca gattcaacat tcaatccgtt
     2761 ttggaatgct gtgatacggg aagacgtttt aaatgcaaac gcttattggt tgatgcagca
     2821 tgatcgtttg ccggaggcgc tggaagcttt taaattgatg gtggaatcgt atcctgaatc
     2881 gcccaatgct tatgacgggc ttggtgacta ttacgaggct gcgggcaaca aaaccgaggc
     2941 gataaaaaat gcggagatat gcctcgaaaa attagataaa gcaacagacc tgaacgcgga
     3001 tttcaaagag cgggtaaggc aaagcgcgtt ggataagatc accaggttga aacaatagac
     3061 gtcgagtcat tagaaatttt ttctcaacct tcgtttatga aaaagatgtt tcccattctt
     3121 ctgtttgcct gtctccatgc tttcgcgcaa gactctgttt tttttcaaaa tgcagagtgg
     3181 tcgcctgatg gaaaaagcat ttgcgcggaa attatcagga aatcgggggc gaatctgcgt
     3241 tatgagggtt acattatcga catccaccga aaaaccattc aacgaaaaat tccgggagca
     3301 gtatttcctg catggtctgc cgatggcaaa accatcgcgt attcgaaacg gaatagttca
     3361 ccgcatggtt ttgacatctg gttaatgaac acgcaaacag gtgacaccac caggttaact
     3421 aatgacacag taagaagcag cggtgtaacg ttttcgcccg atggtaaaaa ggtatgcttc
     3481 tcttctgaca aaggcagcgg tcggcacctt tttgtgatga acacaaatgg aggtgacgtg
     3541 catcaagtta cttttgacac cgcacgatat tttgatccgg tgtgggcacc gggaggtgac
     3601 gaaattgttt attaccgtga agttggagat cagcgagata agatttttac actcgacgta
     3661 aaatttggga aagaaatgaa gatcactgat gatacgttac ataatacgta cccgggttgg
     3721 ctgccaggtg gcaaaacgat cagctacacc tgttcgatcc cattttcgaa tgacgagtcg
     3781 gaacgccaaa cagcgttaat tgacacggat ggcacgcata agcggtttgt tccgggcaca
     3841 caggggagtt ttggttgccg ggtttctccc gacggtaaaa ggatcgctat aataaaagga
     3901 cggtggcctc aatcaaatat ttatatcgtt aacatggatg gaactaacct cgattgcctc
     3961 acatgcaagc tctttgacta atggttcctc aacgtgttct atgtcaaaaa ttttcatcga
     4021 atttatttag ctgtttgtcg aattgatgta tgcaagtaaa ttgaagcgag tagcttagtg
     4081 gccagaaacg cccaaaatgg aatttgataa tgaccggccg gtcaagcgac catacaggat
     4141 tgagatactc tattggatac tgcttggttt aatgaatcca cttgtaagca gcctcaccat
     4201 tttcctgcac gatgcgaaaa cgtgggctgt ggtgttgctc atcaacctac ttgtactgcc
     4261 agcttatctg ttctactcga tgacgattgt gccaaggttt ttgtttcaaa gaaagtacgt
     4321 tcagtttttc gcgttaagtg tactgttttt gatcagtctg cagcttgtat tattttcaat
     4381 ttactcgctt atactgaagt tttcgctgtc tccggcagag caatcatact ttacgtatac
     4441 ggacggtacc atcatcaggg agaatttgtg gagtgtgatc aatatgtcga tggccattgg
     4501 catttacttt atcaaaaagg cgctggatga aaaagaaaca cttgaaaatt tggagaagga
     4561 taatgcgaat ttcaaattga aatacctgcg ctcgcaactg aatccacatt ttcttttcaa
     4621 caca
//
LOCUS       DASQJI010000219         5828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_174818,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000219 DASQJI010000000
VERSION     DASQJI010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5828
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174818"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VEV83_06460"
     CDS             complement(<1..597)
                     /locus_tag="VEV83_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44788.1"
                     /translation="MRKFILPIAACFVCSAISSQDLQFVENKGQWDQQVKFKTLIGAG
                     AVFLQQNGYRVILNNPKELVAISNYLSGHTTGKAEVNKLILHSHAYQVAFLGAAANPD
                     IVTEGELETYNNYFVGSDPSKWTNHCRIFNVITYKNVYPGIDVRYYTQNHHLEYDFVV
                     HPGADIRKIRMRVDGVDELNLSNGDLVVKTSVGEVQQEK"
     gene            1002..5753
                     /locus_tag="VEV83_06465"
     CDS             1002..5753
                     /locus_tag="VEV83_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44789.1"
                     /translation="MGKLLAANRNRAPIFITLISVAALITYYLFVYLPGNEQEIKNQR
                     FRVLQRIDQNIHDKIDNSVALLDLLIESHKTANPKALKKYISDYSKANFILDNIRQEP
                     DSVLKKYKASDRSADSTGSITGTDEDPVGRIKVDYQKQQFEIILKRIIGDGARQHLFR
                     ISMHYRFDQFIQPVLVNNVFDEYVLLSQNQVVYETFPTGIRNYTSDSLLRGTGNGISS
                     SGIRDQQIGGTQYKMFLQPLMFDKKNDWILAGLLSATRYENEKKQLSAAIVLLLVTVS
                     LAIIVAFPWLKLLHMGNQNRLTLLDGGFSLMVAMLLMSLLFFTFFRYNVPFRARDTPG
                     CKENLAASITQAFTNEVRVARDRLYQYDTLMEKKRLFTDLANVANKKKVGVGKMNPSK
                     TFSGKLDSTTKKRLDSISNSISFNQVFWLSNDGTELYNWTKDSINAPHADLSKRNYFI
                     NAKDHNFYFLDNDTSKPFYLDQVVSWTTGTFRTQISTVSCLKDRNLAVVDLSFNVKAL
                     DSVIMPVGYLFAIIDNAGNVLYHSDKTRNLNENLREEFSNSSRLMSSIAAHTTDVFVT
                     DYYGKEYNTRVEPMTGLPYNIVILSDAVYKETKDTEIYSFTISMFLLLFLYFVIEAIA
                     VVFFSAKRSFLTRRGFITDWIWPKKSFHPIYLRASIAHIAVIVLLLLFYPSSDFANLF
                     FILPAGVTWISIFLNSLYIIKYKSEENKRFEYKVFKKYKEATTKTMIVLLVLLNIVAY
                     FVLDTVLSPFFGFEAVAFIVLLAFYLTFMPGDNPLVQFLAQSFNYRQSTPGKPFDLKS
                     RVTARETNPSIKNKLRYSDSFTLMAITKLIISSGIPVIFLYTLDYNYEQNLLTTYRQV
                     DFASRFMDKFHGYDDSLWLRTDNALVRVEDTVHKDDGRLTSSNDTSTAVTEDTLNADR
                     NVNANVNTLLFTAGNKTFCNASFIKGVYNDGSWIQDMYLKNASFADKDGGEKITIKDS
                     LTTLLLNVFRFYQNSIAAKENNLHLHPSLDSFIRFNAEPQHSSPHGGSTTTYVSTKIP
                     GKYLVVTSHPLNYTFPRFFDKYGFSFWLLLLIALIVFYFVLRYIIKTMFAVNLPDLAR
                     WQQVDQQTFRENGLLFIIGPPGSGKMKEIGTRVKEKWWAFDMLTRTTGEEKAGQEESA
                     EKKIEKKDVRNPIKIAYEKVGKDEKKELNFLIDEESLRDYHAIVINNFEYNFNDEEEN
                     CFKLRLLEKLMTLENKPHIIILSTIHPTGFLDSLHASKPNGDTDDFEKFIERWAILLG
                     HFRVLIWPLPRNFDLQQIEENDIAINEANRELLAEFRYGHFLESFQNIFKKPRADKDQ
                     SSPAKSKFESVVENYYIHMSDSLTEEQKMALHEFTKNQLKSFSIKDDPDETLDMNLRR
                     WETTVKNYYMRMSDSLTPEQKSSLNDFAMNDFVTSELANMSTNDDSGYDFDAQSYRFQ
                     LLVQNYYMHIWHSLTKEEKFLLYDLAEDGLVNSCDFYNLGMLISKGLIIRDQDRKLRL
                     FNKSFCNFILTSIGNIEATKIQNQIKDSGHWNRLRVPLMIIIIAILAFLLITQAETYN
                     KIIAYLGALVTGMLTFSRFFGFFEGKETKSS"
BASE COUNT         1722 a         1209 c         1239 g         1658 t
ORIGIN      
        1 tttttcttgc tgcacttctc caaccgaagt ttttaccacc aagtcgccat tgctgagatt
       61 caattcatcg actccgtcca ccctcatcct gattttgcgg atatcggctc ccgggtgtac
      121 gacgaaatcg tactccaaat gatggttttg cgtgtagtat cgcacatcga tccctggata
      181 aacattcttg taagttatta cgttaaagat ccggcaatga tttgtccatt tagaaggatc
      241 acttcctaca aaataattat tgtatgtttc aagttcacct tcggtgacaa tgtcagggtt
      301 ggcagcggcg ccgagaaatg caacctggta agcatgcgaa tgcaggatca atttattaac
      361 ctcagcctta cctgtcgtat gtccggacaa atagtttgaa atcgcgacga gttccttcgg
      421 gttgttcaaa attacccggt aaccattttg ctgaagaaat actgcccccg ctccgatcaa
      481 cgttttgaat ttaacctgct ggtcccattg acctttattt tcgacaaact gcagatcctg
      541 gcttgagatg gctgaacaaa cgaagcatgc tgcgatgggg agtatgaatt ttctcataaa
      601 aagttgggtt acgtggagag gtattgtcaa atatactaat caatcatctg aaatcaaact
      661 gaactgaaat agtcattgaa aagatggatt gacaccaaag tttctgttcg cttacaattt
      721 ggagaaataa atgtgactgc ctcaaagcga tttgtcaatg ttacataagt ggccggaaaa
      781 tatgccgatg atgcttcttg ccaatttgcc gaaaagtttt taacttggtt taccgttccc
      841 tctgaaacct actagtaaca gacgaatcca taggccggca tttgcgtcgt atttgtgcaa
      901 cagaagatac gttgtattgc tcagaatagc taactcgata acgtactcaa tcggaaaagt
      961 atcgcgcctg attcgttgcc aaagaaacta aagcaaaatt tatgggaaag ctgctcgctg
     1021 caaaccgaaa ccgcgccccg atattcatca ctctaatatc ggttgctgca ctcataacgt
     1081 actacctttt tgtatacctg ccgggcaatg agcaggaaat taaaaatcaa cgtttccgtg
     1141 ttttgcagcg gatcgatcaa aacattcatg ataagatcga caacagcgtt gcgttactcg
     1201 atcttctaat tgaatctcac aaaacggcaa acccgaaagc actgaagaaa tatataagtg
     1261 attattccaa agccaacttt attttagata acattcgaca ggaaccggat tccgttttaa
     1321 agaaatacaa agcaagtgac agaagtgccg atagcacggg atctatcaca ggtactgatg
     1381 aagacccggt cggacgcatt aaagttgact atcagaagca acaatttgag ataatactta
     1441 aaagaattat cggcgatggt gcgcgtcagc accttttcag gatctcaatg cattacaggt
     1501 ttgatcaatt tatccaaccg gtgcttgtta ataatgtttt tgacgaatat gttttactga
     1561 gtcaaaacca ggtcgtttat gaaacgtttc cgaccggcat aaggaattat acatctgatt
     1621 cgctccttcg aggtacaggc aatggtattt cttcgtccgg tattcgcgac cagcagatcg
     1681 gcggcactca atacaaaatg ttcctgcaac cgctcatgtt cgataaaaag aacgattgga
     1741 tccttgccgg gctactctct gcaacgagat atgagaacga aaagaaacag ctttcggcgg
     1801 cgatcgtgct tttactggtg actgtttcgt tggcgataat tgttgcattc ccatggctga
     1861 aattgctgca catggggaat caaaacaggc tcacattgct tgatggagga ttttcgctaa
     1921 tggtagcgat gctgctcatg tcgctgctat tctttacatt tttccggtac aacgtgccgt
     1981 ttcgcgcccg cgatacgccg ggatgcaaag agaatttggc cgccagcatt acgcaggcgt
     2041 ttacaaatga agttcgtgtt gcccgtgacc ggttatacca gtacgacaca ttaatggaaa
     2101 agaaaaggct tttcacagac ctggcgaacg tcgcgaataa aaaaaaggtt ggtgtgggaa
     2161 aaatgaatcc atccaaaact ttttctggaa aacttgacag cacgacaaaa aagcgattgg
     2221 acagtatttc aaattctata agctttaacc aggtcttctg gctcagcaat gacggcacgg
     2281 aactatacaa ctggacaaaa gacagcatca acgcaccgca cgcggacctt tcgaaaagaa
     2341 attatttcat taatgcaaag gatcataact tctattttct cgataacgac acgtcaaagc
     2401 cattctatct tgaccaggta gtttcctgga cgacaggaac attcagaacg cagatttcaa
     2461 ctgtatcatg cttgaaggat cgtaacctcg ccgtggtgga tctttctttt aacgtaaagg
     2521 cactggacag cgtaatcatg cctgttggat atttatttgc cattatcgac aacgccggca
     2581 acgtgcttta tcactcagac aaaacacgca atctgaatga gaatctcaga gaagagttct
     2641 caaatagcag caggctgatg agttccattg cggcgcacac cacggatgtt tttgttaccg
     2701 attattacgg caaggaatac aatacgcgtg tggaaccaat gaccggctta ccatataaca
     2761 ttgtcatttt atcagatgct gtttataagg aaacaaaaga cacggagatc tacagcttta
     2821 cgatttcgat gttcttgttg ctctttttgt acttcgtgat cgaggcaatt gctgtggtat
     2881 ttttctccgc aaaaagatct tttcttacca ggaggggctt tataactgac tggatatggc
     2941 cgaaaaaatc gttccatcca atatatctga gagcaagtat tgcgcatatt gctgtcattg
     3001 tattgttgct tctattttat ccctcttctg atttcgcaaa cctgtttttt atcctgccgg
     3061 ccggtgttac gtggatatct atttttctga attcccttta cataatcaaa tacaagagtg
     3121 aagaaaataa aaggtttgaa tataaagtat tcaagaagta taaagaggct accacaaaaa
     3181 cgatgatcgt gctgctcgtt ttgctcaaca ttgttgctta ttttgttttg gatacggtgc
     3241 tctcaccttt ttttgggttt gaggcagttg cctttatcgt gctgttggct ttttacttaa
     3301 cattcatgcc tggtgacaat cccctcgtgc aattcctggc gcaatcgttc aactataggc
     3361 aatcaacacc aggcaaacct ttcgatttaa aatcgcgggt tacagcacgc gagaccaacc
     3421 catcgataaa aaacaaactg agatacagtg acagtttcac gctaatggct atcacaaagc
     3481 tgatcatttc cagcggcatc ccggtgatct tcctgtatac gcttgattat aattacgagc
     3541 aaaacttgtt gaccacttac cggcaggtgg atttcgcgag caggtttatg gataaatttc
     3601 atggctacga cgacagcctg tggctaagaa cagacaacgc gctggttcgt gttgaagaca
     3661 cagttcataa agacgatgga agattgactt cctcaaacga cacttcgact gcagttactg
     3721 aagacacact caacgctgat cgtaacgtga atgcgaacgt taacacgttg ctctttaccg
     3781 cggggaataa aacgttttgc aatgcgtcgt ttataaaggg agtttacaac gatggttcat
     3841 ggatacaaga catgtattta aagaacgctt ctttcgccga caaggatggc ggtgaaaaaa
     3901 tcactataaa agattcgttg acaacgttgc tgttaaacgt ttttcggttc taccaaaact
     3961 ccattgctgc aaaggagaat aatttacatc tgcacccttc gttggattca tttattcgat
     4021 ttaatgctga gccccaacat tccagtcctc atggcggaag caccaccact tatgtgtcta
     4081 ctaagattcc cggcaaatac ctggtggtaa cctctcatcc actgaattac acgttcccgc
     4141 gttttttcga taaatatgga ttttcttttt ggctgttgct tttaatcgcc ttgatcgtat
     4201 tttatttcgt tttacggtac atcattaaga cgatgtttgc cgtgaatctt ccggatcttg
     4261 ccaggtggca acaggttgat cagcaaacgt ttcgcgaaaa cggacttttg tttatcattg
     4321 gtccgccggg gtcgggcaaa atgaaagaga tcggaaccag ggtgaaagaa aaatggtggg
     4381 cattcgatat gctaaccaga accactggtg aagaaaaggc cggtcaagaa gagagtgctg
     4441 aaaaaaagat tgaaaagaag gacgtacgga acccgataaa gatagcgtat gaaaaagttg
     4501 gaaaagacga gaagaaagag ctaaactttc tcatcgacga ggaatcgctt cgcgattacc
     4561 atgccattgt aataaacaat tttgaatata attttaatga tgaggaagaa aattgcttta
     4621 agttgaggtt gcttgagaag ttaatgaccc tggagaataa accgcacatt attattctgt
     4681 caactatcca ccccacaggc ttcctggatt ctttacacgc ttcaaagcct aacggagata
     4741 cagatgactt cgaaaaattt attgagcgat gggctatttt gctgggacat tttcgcgtct
     4801 tgatatggcc cctgccgaga aacttcgatc tacaacaaat tgaggaaaac gatattgcta
     4861 tcaatgaagc aaatagagag ttgctggcag aatttcgata tggtcatttc ctggagagtt
     4921 ttcagaatat cttcaaaaag ccacgggctg acaaggatca atcatcaccg gccaagagca
     4981 agttcgaatc ggttgtcgaa aattattata tccacatgtc cgattcgctc actgaagaac
     5041 agaaaatggc actgcatgag tttactaaaa accagttgaa aagcttctca atcaaagacg
     5101 atccagatga aactttggac atgaacttgc ggcggtggga aacgactgtc aaaaactatt
     5161 atatgcgtat gtcagattca ctcacaccgg aacagaaatc gtcattgaat gattttgcaa
     5221 tgaatgattt tgtaacgagt gagttggcaa acatgtcaac caatgatgat tcgggctatg
     5281 atttcgatgc gcagtcatac agatttcaat tgcttgttca gaactattac atgcacattt
     5341 ggcattcgct tacgaaggaa gagaaatttt tgctttatga tcttgctgaa gatggacttg
     5401 taaattcctg cgatttttat aacctgggta tgcttatcag taagggatta attattagag
     5461 accaggacag gaaactgcga ctctttaata aaagtttctg caattttata cttacttcca
     5521 ttggcaatat agaagccaca aagatccaga accaaataaa agacagtggc cattggaacc
     5581 ggttacgggt gcctttgatg atcattatca ttgcaatttt agcattcctg ctcatcacgc
     5641 aggcagagac ttacaacaag atcattgctt atcttggcgc attggtgaca ggtatgctaa
     5701 ctttcagtcg gttctttgga ttctttgaag gaaaagagac aaagagttcg taagttacat
     5761 cctgctggat cttcatgtgg ccggatggct tatccgaatg ctccgtgctc taaattttag
     5821 atgtgttt
//
LOCUS       DASQJI010000220         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1557066,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000220 DASQJI010000000
VERSION     DASQJI010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557066"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VEV83_06470"
     CDS             <1..1182
                     /locus_tag="VEV83_06470"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 130 protein"
                     /protein_id="HYK44790.1"
                     /translation="HFSYPKKLLLGAFFTKEYSIQAAALFNPSIVPHPDQQGLKPGEQ
                     RFLMSLRATGEGHISSIVFQTGIVDDKVNVTLDSASGYFTCLQKNPTTQYTKDFITKF
                     VAAMPGFDERILDMLPDSFSAAEAVHILKSLEIKDPSKNSIAIIERILDSNYDLELSL
                     DLPINEKVIFPNAKAERMGMEDVRLVKFTDEGRSCYYGTYTAYDGKNIKTQLLETTDF
                     NEFKIRTLYGAAVYDKGMALFPEKVNGKYAMVSRQGGEKINIMFSDDLYRWDEFKTLM
                     EPLYIWELVQLGNCGSPLKTDKGWLLLTHGVGIMRTYVISAILLDLQDPSRIIGRLDK
                     PLVEADANEREGYVPNVVYTCGFMRHGNVLIIPYAVSDSATGFATIELDEILNAMKSQ
                     N"
     gene            1186..2493
                     /locus_tag="VEV83_06475"
     CDS             1186..2493
                     /locus_tag="VEV83_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44791.1"
                     /translation="MKRIASVFYLCTTGLILLACTKSSTSQPPPPPPDTILINLSHLN
                     YLYTPLTFPNGVNAAGIYIYSEAPDYHLVEASGEGFSCVDDVSRATLVYIRSKNFSSD
                     TSSQGKAINLVKFMLQMQSANGYFYNFLFTNGLINKAGATSVDNPNWWSWRALQALTE
                     AYPRIKNIDPSLAAEMDASITKLVANIKRDFVPLPQTTKVVNGITVPEWLPAGSGTDQ
                     ASLMIIGLISYYALHNDAVVKDYVKKLADGVALMQAGDGSNYPYGPFLSWEDTWHAYG
                     NLQAYALMNASAFLNDETYKTKAFVEVDNFYPWLLQNGFQSSFSLSKSGSTYQTLSEN
                     DYDQIAYGIEPMFFAAAEAYKETLDDKYADIAGHIAAWLLGANDPAMNMYDTATGRCF
                     DAIFSATGVNRNSGAESTIEALLTLQKVEEVPAIKTALDKYKK"
     gene            2639..>3323
                     /locus_tag="VEV83_06480"
     CDS             2639..>3323
                     /locus_tag="VEV83_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44792.1"
                     /translation="MKNSFIKSDHLIFTPDDVDLSFSPLRKCLKEPTYVLGAFNPGLC
                     RLPNGNLLIMVRVAEALSDPVVEGTVHSIRWDEENGFVRDAWPLENVNMLDPRKFRIN
                     DYAFPVFALTSLSWLLPVELNEDGSSITHVHYDKIIAPQFTSQEYGIEDARISFIDSR
                     YYMTTCCVSSERHSTMLYVSDDGLNYKNCGVVLDHQNKDMLLFEGKISNTYYALTRPM
                     GECYFASSPS"
BASE COUNT          966 a          670 c          740 g          947 t
ORIGIN      
        1 catttttcat atccaaaaaa attattgctc ggagcctttt ttacaaaaga atattcaata
       61 caggcggcag cattgttcaa cccttctatt gttcctcatc cggatcaaca gggtttaaaa
      121 ccgggagaac aaagattttt aatgagcctc cgggcaacag gcgaggggca tatttcttca
      181 atcgtttttc aaacgggtat tgtagatgat aaagtcaatg ttacgttgga cagcgcttcg
      241 gggtatttta catgcctgca aaaaaaccct accacccaat atactaaaga ctttattaca
      301 aaatttgtcg cagcaatgcc gggttttgat gaacgcattt tagatatgct gcccgattca
      361 ttttctgcag cagaggcagt ccacatttta aaatcattgg aaattaaaga tccatccaaa
      421 aactcgattg caataattga gagaatactg gactcgaatt atgatctcga actttctttg
      481 gatttgccga ttaatgaaaa agtaatcttc ccaaatgcaa aggcagagag gatgggcatg
      541 gaagatgttc ggctggtaaa atttacggat gagggacgta gttgttatta tggtacgtat
      601 actgcttatg acggcaagaa cattaaaacc cagcttttgg aaacaaccga cttcaatgaa
      661 tttaagattc gaacgttgta tggcgccgct gtatacgata aaggcatggc attgttccct
      721 gaaaaagtga atggcaaata tgcgatggta tcaagacagg gaggagaaaa gatcaatatc
      781 atgttctcag atgatctcta caggtgggac gaatttaaaa cgctgatgga gcctctttac
      841 atctgggaac ttgtgcaatt aggcaactgc ggatcacctc ttaaaactga taaaggatgg
      901 ctattgctta cgcatggtgt tggcataatg cgcacctatg tgatcagtgc tattttactc
      961 gatcttcaag acccgtcgcg catcattgga agattggata agccgctcgt tgaagcagat
     1021 gcgaacgagc gcgaaggtta tgtcccgaat gtagtgtata catgcggttt tatgcgtcac
     1081 ggaaacgtat tgataattcc gtacgcagtg tctgattctg ccaccggatt cgccacaatt
     1141 gaattagatg aaatattaaa tgcaatgaaa tctcaaaact gatttatgaa aagaatagcc
     1201 agcgtatttt atttgtgtac aacagggctt attttacttg cctgcacaaa atcgtcgacg
     1261 agccagccac caccacctcc gcctgacaca atactgatca atttaagtca tcttaattac
     1321 ttatacacgc cgctcacatt tccaaatggg gtaaatgctg cgggcattta tatttattca
     1381 gaagcccccg attatcatct cgtggaagcg tcaggcgaag gattcagttg tgttgatgat
     1441 gtatccaggg caacccttgt ttacatacgc agcaaaaatt tttcttcaga cacatcctcg
     1501 cagggaaaag cgatcaacct ggtcaagttc atgctccaga tgcaatcggc caacggatat
     1561 ttttacaatt ttttatttac taacgggttg atcaataagg caggtgcaac gagtgttgat
     1621 aatccaaact ggtggtcgtg gcgcgccctc caagcgctta cagaagctta tccacggata
     1681 aaaaacattg acccatcgct cgccgctgaa atggatgcgt ccattacaaa gttggttgct
     1741 aatattaaaa gagattttgt ccctctcccc caaaccacaa aagttgtaaa tggaattacc
     1801 gtgcccgaat ggttgccggc gggtagtgga acagaccagg cttcgctcat gatcatcggt
     1861 ttgatctcgt attatgctct tcacaatgac gccgtcgtta aggactatgt aaaaaaactc
     1921 gcagacggag ttgcattaat gcaggcaggt gatggatcga attatcctta cggacctttt
     1981 ttaagttggg aggatacgtg gcatgcttac ggcaacctgc aggcttatgc gctgatgaac
     2041 gcttctgcat ttttgaatga cgaaacttat aaaaccaaag catttgttga agtggataat
     2101 ttttatccat ggctactgca aaacggattt cagtcttcct tttcgttgtc gaaaagcggc
     2161 agcacctatc aaacattatc tgaaaatgat tacgaccaaa tagcgtacgg catcgagccc
     2221 atgtttttcg cggccgctga agcatataag gaaacgctcg atgataaata tgcagacata
     2281 gccggtcata ttgcggcgtg gctgttggga gcgaatgatc ctgcgatgaa tatgtatgat
     2341 accgccaccg gtcgttgctt tgatgctatc ttttcagcaa cgggcgtaaa tcgtaattct
     2401 ggtgctgagt caactattga ggctttgctc acattacaaa aggtggaaga ggtgccagcg
     2461 ataaagacgg ctttggataa atataaaaag tagtgatgtt tttaattaag ggcgttcacg
     2521 atggtttgct gacttggcac actgcattgc agatacttcc tttcgccggc atgacacggt
     2581 tcgcttgtca ttccggggca cgaggaattt gcaacgcatt ctcaaacgga gtactcaaat
     2641 gaaaaatagt tttataaaat ctgaccattt aatatttaca cccgatgatg tagacctgtc
     2701 tttttcacca ttaagaaaat gtttgaaaga acccacttat gttttaggcg ctttcaatcc
     2761 cggtctttgc cgtttaccga atggaaattt gctcatcatg gtccgcgttg cagaagcact
     2821 atctgatccc gttgtagagg gcacagtgca ttcaataaga tgggatgaag aaaatggatt
     2881 tgttagggac gcatggccgc tggaaaatgt gaatatgctt gacccacgaa aattcagaat
     2941 aaatgattat gctttcccgg tgtttgcact aacttcttta tcatggttgc ttccagttga
     3001 gttgaatgaa gacggcagct caatcacgca tgtccattac gataaaataa ttgctcctca
     3061 gttcactagc caggaatatg ggatcgaaga tgccaggata tcgtttatcg atagccgtta
     3121 ctatatgact acctgttgtg taagttcaga aagacactca acgatgttat atgtttccga
     3181 tgatggcttg aactacaaga attgcggtgt tgtgcttgat catcagaata aggatatgct
     3241 cttgttcgaa gggaagatca gcaatactta ttatgcttta acgaggccga tgggtgaatg
     3301 ttattttgca tcatcaccat cat
//
LOCUS       DASQJI010000221         4130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_635421,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000221 DASQJI010000000
VERSION     DASQJI010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4130
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635421"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VEV83_06485"
     CDS             complement(<1..1061)
                     /locus_tag="VEV83_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HYK44793.1"
                     /translation="MNNATMYYSDYLHLDKILTSQEPVSFKENNIPAHDEMLFIIIHQ
                     SYELWFRQILFELAYVLKVFSKEKINDNSEDLNLVAHRLGRVIRILELLNQQVGILDT
                     MTPLDFLEFRNLLIPSSGFQSAQFRLIEAVLGLQMDIRHQQDYYKRTNAGGFSQTDLE
                     KINQTEASENLSHLVNKWLERMPFFEEQFWINYHPIGNADGTGHVFWNDYRQIYKEGL
                     NERETLKIVDFDYVFFNKIPLNTEPETLQSLRGTFSPNALRSALFIMLYRDFPVFQTS
                     YRVLDSLIEIDHLLSNWRHKHLIMVRRMIGMRVGTGNTTGAGYLEGALNKHYIYRDIS
                     GLSTYLIERRNLPRLPDEL"
     gene            1190..1909
                     /gene="pyrH"
                     /locus_tag="VEV83_06490"
     CDS             1190..1909
                     /gene="pyrH"
                     /locus_tag="VEV83_06490"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HYK44794.1"
                     /translation="MLPRYKRIVLKLSGESLMGNSDDGFEPFNGAIIEQYALDIKRIT
                     EVGVQVALVIGGGNIYRGANESESGIERAHGDYIGMLATSINGMAMQAMLERIGVDTR
                     LLSAIKMEQVAEPYIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAGSLRALEIKAEVI
                     LKGTRVDGIYTADPELDLAALKYETITYQECILKNLKVMDMTAFTLCMENNLPIIVFD
                     MNKPGNLFKVIEGLNVGTLVN"
     gene            1920..2591
                     /gene="pdxH"
                     /locus_tag="VEV83_06495"
     CDS             1920..2591
                     /gene="pdxH"
                     /locus_tag="VEV83_06495"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HYK44795.1"
                     /translation="MHSFFGKEGSSEKKIADIRKEYSLHALDEQHIASNPFDQFTKWW
                     HDVLNSEILEPNAMTLATSTIAGMPSARIVLLKGYDERGFVFFTNYKSNKGNELAENP
                     NAALLFFWKEIERQVRIEGVVTKIASEESDEYFLSRPEGSRIGAWASPQSQVIESRTV
                     IEANAERYAQEFKNSIPRPPHWGGYRVMPWRFEFWQGRINRLHDRIQYTKIADGSWKV
                     DRLAP"
     gene            complement(2822..3091)
                     /locus_tag="VEV83_06500"
     CDS             complement(2822..3091)
                     /locus_tag="VEV83_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HYK44796.1"
                     /translation="MNKAELVSKIAEDAGIGKSQANAAVDSFVDAVTKTLKSEGKVTL
                     VGFGTFCISRRKARTGRNPKTGESIKIKAKKVARFKAGKELAAKL"
     gene            complement(3270..>4130)
                     /locus_tag="VEV83_06505"
     CDS             complement(3270..>4130)
                     /locus_tag="VEV83_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HYK44797.1"
                     /translation="LEERSGDYCALRLGFRQIKGMRHEDAEVLVSARKNIFSTINELL
                     DAGLSLAALEKLADADAFRSLGLDRRRALWEIIALRDSPLGLFKGHHSETAGENDPSL
                     PEMSLSEHVVQDYGATSLSIKAHPVSFIRDKLKMLHIISTKELSYANDGDIVKVAGLV
                     LVRQRPGTAGGICFITIEDETGTANLVVFRNLFENVYRKQILQAKLLMVQGKLQKEGE
                     VIHVIVSHCEDWSKLLRSLTTSKSNDLPLLTLSRADEHSGLPFESLNKKTQIREIAQE
                     QLFPGARNFR"
BASE COUNT         1138 a          885 c          933 g         1174 t
ORIGIN      
        1 atcagttcat ccggcagcct gggtagattt cttctttcaa tgagatacgt ggaaagaccg
       61 gaaatatcgc ggtagatata atgtttattg agcgcacctt ccaggtaacc ggcgccggtt
      121 gtgttaccgg ttccaacgcg catgccgatc attcttcgta ccatgatcaa atgcttatga
      181 cgccagttgc tcaataagtg atcgatctcg atgagcgaat ctaaaacacg gtaagacgtt
      241 tgaaacaccg ggaaatcccg gtaaagcatg atgaacaagg cggagcgaag cgcattcgga
      301 gaaaatgtcc cgcgcaatga ctgcagtgtt tcgggttcgg tatttaaagg gatcttgtta
      361 aaaaacacgt agtcaaaatc gacgattttc agtgtttctc tttcattcag gccttcctta
      421 tatatctgcc tgtaatcatt ccaaaacaca tgaccggtgc cgtccgcatt tccgatcgga
      481 tgatagttga tccagaactg ttcctcaaaa aaaggcatac gctcgagcca tttatttacc
      541 aggtgggaaa ggttttccga agcttcagtt tgatttatct tctcaaggtc tgtttggcta
      601 aatccgccgg cattcgttcg tttatagtag tcttgctggt ggcgaatgtc catttgcaaa
      661 ccgagtacag cctcgatcaa gcggaactgg gcgctttgaa agccagagga aggaatcagt
      721 aaattccgaa attctaaaaa atcaagtggc gtcatcgtgt cgaggatgcc cacctgctgg
      781 ttcagcaatt ccagtatcct gatgacgcgg cccaggcgat gcgcaacgag attcaaatcc
      841 tctgagttgt catttatttt ttctttgctg aacaccttta aaacatacgc cagttcaaac
      901 aagatctgcc tgaaccataa ttcatacgac tgatgaataa tgataaaaag catttcatca
      961 tgtgccggaa tattgttttc tttaaaactg acaggttcct ggctggtcag aattttatcg
     1021 agatgcaggt aatcactata atacatcgtg gcattattca tataacagca atttgggcaa
     1081 agaaacgtct tgtttgcaat atgtaggttg cagcaaaact tggctgatgt aaaaaaaatc
     1141 aggttaattt gcaggccgtc aatctaatcg gaatcacaaa atctactgca tgcttcccag
     1201 gtataaacgc attgtgctaa aactttccgg agagtcgtta atgggaaata gtgatgatgg
     1261 gtttgagccg tttaatggag ctatcatcga gcagtatgcg ctggatataa aacgtatcac
     1321 ggaggtaggt gtccaggtgg cgttggtaat tggaggcgga aatatttatc gcggcgccaa
     1381 cgagagtgaa agcggtattg aacgcgccca cggcgattac ataggaatgc tggctactag
     1441 tatcaacggt atggctatgc aggccatgct tgaacgcata ggcgttgata cgcgtttact
     1501 gagtgccata aaaatggaac aggttgcgga gccatatatc cgccggcgag ccattcgtca
     1561 cctggagaag gggcgggtgg taatcttcgc agcaggcaca ggcaacccat attttaccac
     1621 agacacggcg ggctctcttc gggctttaga aataaaggcg gaagttattt taaaaggcac
     1681 acgggtggac ggcatttata cggcagatcc tgagttggat ctcgccgcat taaaatatga
     1741 aaccatcact taccaggaat gtattttgaa aaacctgaag gtaatggaca tgactgcatt
     1801 tacgctctgc atggaaaaca acctgcccat catagtcttt gacatgaaca aaccgggtaa
     1861 cctttttaaa gtgatcgaag gtttgaatgt cggcacgctg gtaaactaaa gctccgcata
     1921 tgcatagctt ttttggaaaa gaaggatcct ccgaaaaaaa gatcgcggat atacgcaaag
     1981 agtacagctt gcatgctctc gatgagcaac atattgcttc aaatcctttt gatcaattta
     2041 cgaagtggtg gcacgatgtt ttaaatagcg agatccttga gccaaatgca atgacactcg
     2101 ctacttcaac gatcgctggg atgccttcgg caaggatcgt tttattgaaa ggatatgatg
     2161 aaagaggatt tgttttcttc acaaactaca aaagcaacaa gggtaacgag ttggctgaaa
     2221 atcccaacgc ggcattactt tttttttgga aggaaataga acggcaggta aggatagaag
     2281 gtgtggtaac aaaaattgct tcggaagaaa gtgacgaata ttttttgtcg agacctgaag
     2341 gaagccgcat aggcgcatgg gcgtcgccgc agagccaggt gattgaaagc aggaccgtga
     2401 ttgaagcaaa tgctgagcga tatgcgcagg aatttaaaaa cagcattccc cggccacccc
     2461 actggggagg ttaccgggta atgccttgga gattcgaatt ctggcagggc cgtatcaacc
     2521 gtttacacga tcgcatacag tacaccaaaa tcgctgacgg gagttggaag gttgacaggc
     2581 ttgcaccata gcaacatcac cttcatttat gcctgggtat cttgatcttc tttagtcggt
     2641 ttcgcttttt ttgctctcgc tggttttgcg tgtcggctct ttccaaaaga acccttaaaa
     2701 atttttcctc gttttgtttt cttatcgccg cgacccataa tttttgatga ttttatccgg
     2761 atgaaaaaat gttgtgaagt ttgaaaggag aggttgttag ctctttccca ggaatagagt
     2821 actataattt agctgccagt tctttccctg ctttaaaacg ggctactttt ttggctttta
     2881 tcttaattga ctcccccgtc ttgggattac gacccgtgcg tgctttacgc cttgaaatgc
     2941 aaaacgtccc gaatccaacc agggtaacct tgccttcgga tttgagtgtt ttcgtaacag
     3001 catccacaaa agaatcaact gccgcgtttg cctgtgattt accaatacct gcgtcttcag
     3061 caattttaga aaccagttca gccttgttca taattgtttt aattttttaa atttgatagg
     3121 aaccaacaaa tgtattttct ttttggagtt aataaaataa atctttcaat cttttgcaac
     3181 aacgttaatg gctgaaatgc tatgccgcaa atgatttcag cgtttaacaa aacaagatcc
     3241 caacatttga actggaagga gccttttctt tacctgaaat ttcttgctcc ggggaacagt
     3301 tgttcctgcg cgatttcacg tatttgtgtt tttttattca gagactcaaa aggaagacca
     3361 ctgtgctcat cagcacgcga tagtgtaagt aaggggagat cgttgctttt acttgtggtt
     3421 aaactgcgca ataactttga ccagtcttca cagtggctga ctatcacatg aattacttca
     3481 ccctcttttt gaagcttacc ttgtaccatc agtaatttcg cctgtagaat ttgttttcga
     3541 tagacattct cgaataaatt tcgaaataca acgaggttag cagtcccggt ttcatcttcg
     3601 atcgtaataa agcagatacc tcctgcagtt cccggccgtt gtcttaccag cacaagcccg
     3661 gctactttaa cgatatcacc atcattagca taactcagtt cttttgttga tatgatgtgg
     3721 agcattttca gtttgtcgcg aataaaactc accgggtgtg cttttataga aagcgaagtg
     3781 gctccataat cctgaacaac atgttcagac aacgacattt ccggaaggga tggatcgttt
     3841 tctcctgcag tttctgaatg atgtcctttg aataaaccaa gtggactgtc gcgcaacgca
     3901 atgatctccc ataatgcgcg ccgcctgtcg agtcctaacg acctgaaggc atccgcatcc
     3961 gcaagctttt ccagggctgc taaggacagg cctgcatcga gtagttcatt aattgtgctg
     4021 aagatatttt ttctagcgga taccaacact tctgcatcct cgtggcgcat tccttttatt
     4081 tgcctgaaac caagtcgcaa tgcgcaatag tctcctgacc tttcttcgag
//
LOCUS       DASQJI010000222         3128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1557295,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000222 DASQJI010000000
VERSION     DASQJI010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557295"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VEV83_06510"
     CDS             complement(<1..791)
                     /locus_tag="VEV83_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44798.1"
                     /translation="MAEVKDKILFDYTEESIRSLDWREHIRLRPGMYIGKLGDGSSPD
                     DGIYVMIKEVIDNCIDEYTMGYGKHVDIKIEGKTVTVRDYGRGIPLGKVVDVVSKINT
                     GAKYDSKAFQKSVGLNGVGTKAVNALSNYFKVDSYREGKMKTAEFEKGVLIKEYKEGK
                     TGEQNGTLITFIPDDTVFTNFKFNYDYLENQLWNYCYLNAGLVITLNNKRFVSKNGLL
                     DLLQRKTNPDELRYPIIHLKAEDIEAAISHHSDYGEDIFSFVNGQ"
     gene            1051..2073
                     /locus_tag="VEV83_06515"
     CDS             1051..2073
                     /locus_tag="VEV83_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HYK44799.1"
                     /translation="MKSLILALFLISLMSIAAGQKIELLASGKTTSLRGLSVVDDNIV
                     WASGSNGQVARSIDGGKSFEWMTVTGYEQRDFRDIEAFNANTALVMAVSEPAVILKTK
                     DGGKTWKQVFGDSRKGMFLDAMDFVDEKNGIVVGDPVDNKLFVATTGNSGDKWRSLKP
                     EENVYAAAEGEAFFAASGSNVKVTGGKGNANIFFVTGGKKSRLFFAGAPVDLNIIQGK
                     DSQGANSIAIDPLVRRLVIVGGDFSNDSLARNNVQVFTINGDQLLSPVIQTPPHGYRS
                     CVTFFADDKLLCCGTSGVDISNDGGINWQLISSDSYNVCAKAKNGSGVFLAGKDGKIG
                     KLSSTP"
     gene            complement(2804..>3128)
                     /locus_tag="VEV83_06520"
     CDS             complement(2804..>3128)
                     /locus_tag="VEV83_06520"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HYK44800.1"
                     /translation="IFQLRIKGLQPVLAHPERYNYYLGTPDQYDRFLDLGCLLQINIL
                     SLLGYYGEPVKNTAQNLLKKKMVSLVGTDMHHENHLKGLKSLASKKSFYKLFEGAEMR
                     NKELL"
BASE COUNT          900 a          630 c          659 g          939 t
ORIGIN      
        1 tactgaccgt tgacaaagga aaaaatgtct tcaccgtaat cactgtgatg tgaaatagca
       61 gcttctatat cctcagcttt caaatgaatt ataggatatc tgagttcgtc cgggttggtc
      121 tttcgttgca gcaggtcgag caatccgttc ttgcttacaa atcttttatt gttcaacgta
      181 ataacaagcc ccgcgttcaa atagcaatag ttccaaagtt gattttcaag atagtcgtag
      241 ttaaacttga aattggtgaa cacggtgtcg tcgggaatga atgtgatcag cgtgccgttt
      301 tgctcacccg ttttgccttc tttgtattct tttatcaaaa cacctttctc aaactcagca
      361 gtcttcatct tcccttcacg ataactgtca actttaaaat aattactcag tgcatttact
      421 gctttcgtac ccacaccgtt caaccccaca cttttttgaa aagctttgct gtcgtactta
      481 gcgccggtgt ttatcttact gactacgtcg accactttgc cgagggggat accacggcca
      541 taatcgcgaa cggttaccgt tttgccctcg attttaatat cgacatgctt gccatagccc
      601 atcgtatact cgtcaatgca attatcaatt acttctttga tcatcacata aataccatcg
      661 tcaggtgaag agccatcgcc aagtttaccg atgtacatgc ccgggcgcag ccgtatgtgt
      721 tcccgccaat cgaggctgcg aatactttct tctgtataat caaacaagat cttatctttt
      781 acttctgcca tgaatgatcg ttaaatccaa tgatgtttta ctgccggtct cttctttttc
      841 aaaatttatt tgacgcagaa tttgatctgc aaacccatcc atcaaaaacg ggcaaaaata
      901 acattaccgg ccggcaaagc aatttaaggt tttcagaaaa tccggttgta cagattaata
      961 cacttgctgt tcataactat caacttgcga ataattttta tctggattta attgcaaaag
     1021 cggtatgaac cttgcttaac aaactcaact atgaaatctc ttatcctggc gctcttctta
     1081 atttcgctta tgtcaattgc ggcaggccaa aagatcgagc tactggccag cggcaaaaca
     1141 acttccctgc gcggcttaag tgttgttgat gacaacattg tctgggcaag cggcagcaat
     1201 gggcaggtgg cgagaagtat agatggaggg aagagtttcg agtggatgac ggtgacaggt
     1261 tacgagcaaa gagatttcag ggatattgag gccttcaatg caaacacagc tttagttatg
     1321 gcagtgtctg agcctgctgt tattttaaag acaaaagacg gcggaaaaac atggaaacaa
     1381 gtgtttggtg attcgaggaa gggaatgttt ttggacgcga tggattttgt ggatgagaaa
     1441 aacggtattg ttgtaggcga cccggttgat aataaattgt tcgtcgcgac aaccggaaat
     1501 tccggcgata aatggcgcag cttaaagccg gaagaaaatg tttacgctgc tgcggaaggg
     1561 gaagcttttt ttgcagccag cggatccaac gtaaaggtta cgggcggtaa aggaaatgca
     1621 aacatctttt ttgtaaccgg ggggaagaaa tcgagattgt tctttgcagg tgcaccggtg
     1681 gatcttaata ttattcaagg taaggattca cagggcgcga attcgatagc aatagaccct
     1741 ttggttcgcc ggcttgtgat tgtgggcgga gatttttcga acgattcact ggcgcgaaat
     1801 aatgtacagg tctttactat taatggtgat cagcttcttt cacctgtgat tcaaacaccg
     1861 cctcacggct atcggagctg cgtgacattt tttgcagatg ataaattgct ttgctgcgga
     1921 acgtctggtg tagatatttc gaacgatgga ggaattaact ggcagcttat ttcaagcgac
     1981 agctataatg tttgtgcgaa ggcgaaaaat ggaagtggag ttttcctggc gggaaaagat
     2041 ggaaagatcg ggaagctgag cagcacaccg taggagtttt ttcaatgttc aacaatcaat
     2101 tttcaatgat caatttttgg aggtacaatt ttcaagcatc gtgtcgttaa atgagcatta
     2161 aaaattgagc attgaatatt gaatattttt attttagcca ctcaacgttt aagagtccga
     2221 aacactcaat attcaacaat caataatcaa tgttcaattt ttggaggatg aattttccag
     2281 catcgtcatc aaatgagcat tgaatattga gaattgaata ttgaatattt tgctccgcta
     2341 aacatttaaa attccgaaac actcaatatt caattcaaca atgaacgcgt tgtgctatta
     2401 agattgacca cgaaaaattc tgttaagctg tttgctgccg gaacatatgg caactacaac
     2461 gccgtcatgc ccggcgccga cggggcatct gctctaaata attttagagg ccaataaata
     2521 aattcttcca tccgaaatca atttattctt tcatgatcga ttccatttca gtcgcttaaa
     2581 cggaaagatt gggaagttga gtaaccaatg agaattgaat attgaatatt ttgctccgct
     2641 aaatgtttaa aattccgaaa cactcaatat tcaacaatca ataatcaatg ttcaaattcg
     2701 aggaagaatt tccggcatgt tgtcatcaat gtgcattgaa tattgagcat tgattattga
     2761 atattttctc cgttaacgtt tagtctcccg agttaccccg aacctacaac agctctttat
     2821 tcctcatctc cgccccctca aaaagcttat aaaaactttt ttttgaagcg aggcttttaa
     2881 gccctttgag atggttctca tgatgcatat cggtgccaac caacgacacc atttttttct
     2941 tcagcaagtt ttgtgcggtg tttttaacgg gctcgccata gtagcccagc agcgaaagaa
     3001 tgtttatttg caaaagacat ccgagatcca aaaaacgatc gtattgatcg ggtgttccca
     3061 ggtaataatt gtatcgctca ggatgtgcca atactggctg cagtccttta atacgtagct
     3121 gaaaaatg
//
LOCUS       DASQJI010000223         3340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1557309,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000223 DASQJI010000000
VERSION     DASQJI010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557309"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VEV83_06525"
     CDS             complement(<1..1025)
                     /locus_tag="VEV83_06525"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HYK44801.1"
                     /translation="MKKKILNRSILSVLVFFLFSIISKPLQAQTGLIGYWPFDGNGTD
                     QSGNTRNVTLVGSPTFATGLFGQAVSLDGTGNMYAQRAIDDSVFDFSARDFTVSVWVK
                     FNTIANEQVLIEKFTGVAGPGWTLTKLSTQELRFAAPPVLTMTSGALNISTGVWHNFI
                     ITRLSDDFKLYVDSKLILQQTASGAISNSSDPLLIGRRDAADGRIFGVNGLIDEAAIW
                     SRSLCDNEITLIWNNGKGTAANLTACCNKPVGLKAKKITSSSATLTWKPVTGAAKYKL
                     QYRVQGTTSWTSKTITDTFYNATGLAASTMYEFRVQTYCTADGFIKSKFSKIATFSTA
                     AFAQNAV"
     gene            1924..2913
                     /locus_tag="VEV83_06530"
     CDS             1924..2913
                     /locus_tag="VEV83_06530"
                     /inference="COORDINATES: protein motif:HMM:NF033563.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HYK44802.1"
                     /translation="MNKGKTFLQLSEGERYQIEVLLNAGSSLSAIAKALNRSVSTISR
                     EVRRNSLVKYKAKIAQRQAERRHRFKPKRRVFDQAMQNFICKNLQKERLSPELISVKG
                     RQTRCDFISHEWIYQWIWRMKFSQAKADRCYNHLYEYLRHAYRRRKRSRQRHNRGNIL
                     KRIWIDQRPPRVDQRMRSGDLEADIMLGKDRKPGLLVALDRKTRMTWIRRLKNKDSRY
                     VIGKLKQICRQIGNVRTITLDNDQSFAEHYKLNAMGIKTFFTHPYSSQEKGSVENRIG
                     LIRIFFPKQSVFSEVSDQRVKSVQNMINNRPLRMFDYKSPKEIYISYPIKLKT"
     gene            complement(3016..>3340)
                     /locus_tag="VEV83_06535"
     CDS             complement(3016..>3340)
                     /locus_tag="VEV83_06535"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HYK44803.1"
                     /translation="IFQLRIKGLQPVLAHPERYNYYLGTPDQYDRFLDLGCLLQINIL
                     SLLGYYGEPVKNTAQNLLKKKMVSLVGTDMHHENHLKGLKSLASKKSFYKLFDGAEIR
                     NKELL"
BASE COUNT          998 a          686 c          729 g          927 t
ORIGIN      
        1 tgcactgcat tttgcgcgaa cgctgctgta ctaaatgtgg caatcttact gaacttcgat
       61 tttataaagc catcggctgt acaatacgtt tgcaccctga actcatacat tgttgaagca
      121 gccaggcctg ttgcattata aaatgtatct gtgattgttt ttgatgtcca gctcgtcgtt
      181 ccctggactc tgtattgcag tttatacttc gctgcaccgg taaccggttt ccatgtaagt
      241 gttgctgatg acgaagtgat cttttttgcc tttagtccta ccggcttgtt gcaacaagcg
      301 gttaaattgg ccgcagttcc cttaccattg ttccagatta gtgtgatttc attatcacaa
      361 agggacctcg accagatcgc tgcctcatct atcaaaccat ttactccaaa gatccttccg
      421 tctgcagcat cgcggcggcc aatcaaaagc gggtcgctcg aattggatat ggcaccggat
      481 gctgtttgtt gcaaaattaa tttgctgtca acatacagct tgaaatcgtc ggaaaggcgg
      541 gtaatgatga agttgtgcca aacgccggtt gaaatgttga gtgcaccgga agtcattgta
      601 agtaccggcg gagcagcgaa tcgaagttct tgtgttgaaa gttttgtgag ggtccagccc
      661 gggccggcca cgccggtaaa tttttctatc aaaacctgtt cgtttgcgat ggtgttgaat
      721 ttaacccaaa cagagacggt aaaatctctg gccgagaagt cgaacacgga gtcgtcaata
      781 gctcgttgag catacatatt accggtacca tcaaggctca ccgcctgtcc aaataaaccg
      841 gttgcaaatg tcggcgagcc aactaacgtc acattacgag tgttgccaga ctgatcagta
      901 ccgtttccat cgaatggcca atagcctatg agccctgttt gtgcttgaag tggtttcgaa
      961 ataatagaaa acaagaaaaa aacaagaacg gataggatgc ttctgtttag tatctttttt
     1021 ttcataacga taagtttggt agtggcgaaa ttgtagattg gaaaagcagc ataggtatat
     1081 aaagttattt caaaacatga aatgttcaaa ctttggattt ttaatatgaa aaacccatcg
     1141 aaatatttcg ccatgagtac atcatctgtt ttgcaaatac caccgcccat ataaccacga
     1201 agaaacttta tggtaccgtg cactaagcct attcgcattg caggtgcact tctgaatgca
     1261 accgcgtagc cattttagtc cgtgagagaa cgcggattca tatatgaagc gatggcagaa
     1321 agcatcaata gcctccttat catctgcttc cgttttgatc taattaagta gaattatcgg
     1381 tagcgccgga aagaaaacca caatggcaaa gattgtcatc cgcgaaccaa actcggtttt
     1441 agaaattagt cgaagcggaa tgtgatttac gtgtgctgac gactaaactt tttcctttag
     1501 atgttatgtt tacttcacag gcccgtcaga aaactttgag aattggttgc aacccgtgac
     1561 gatactgacg acacaaaccc aaagcagtat aaaaataaag atggtgaaca atctgcttct
     1621 gcaggaaaga gaaaagccgg acattgctgt gaacgcctaa atagtaaggg aacctacttg
     1681 tcccgcattt tttgcagtac catcggccat ggggcttaac ttctctgttt tcattttggt
     1741 atcagcacaa ttatcagata ttccatgggc ttcgttcaat tttcaacggt ccgccaactg
     1801 aagattcatg aacatttcta ggttcaacta ataaatgcaa aggttattaa gtaaattcaa
     1861 aagggaaaca tccattcatt ttcgcagtga agatgttccc ccttgagttg ttaataacaa
     1921 tgtatgaata aaggtaaaac attccttcag ttaagcgagg gagaacgtta tcaaattgaa
     1981 gttcttttaa atgcaggttc atcgctgtcg gcaatagcga aagctttgaa ccgatctgtg
     2041 agtaccatat cgcgggaagt tcgcaggaac agtttagtaa agtacaaggc gaagatcgct
     2101 cagcggcaag ctgagaggag gcatagattt aagccaaagc gtagggtttt cgatcaggcg
     2161 atgcaaaact tcatttgtaa aaatttacag aaagaaaggc tatctccgga attgatttcg
     2221 gtaaagggca ggcagacaag atgcgatttt atttctcatg aatggattta tcaatggata
     2281 tggcgaatga agttttctca ggccaaggcg gatcgctgct acaaccattt gtatgaatac
     2341 ctgcgacatg cttaccggcg gcgcaaacga agcaggcagc gacataacag gggtaatatt
     2401 ttgaaaagaa tctggattga tcaacgacca ccacgggtcg accaaagaat gcgtagcggt
     2461 gatctggaag ctgatatcat gctgggcaaa gatcgtaagc caggtctttt agtggccctc
     2521 gatagaaaga caagaatgac ttggatacgt agactcaaga acaaagactc tcgctatgtc
     2581 atcggaaaac tgaaacagat ttgcaggcag attggaaatg tcaggaccat aacattagac
     2641 aacgatcaaa gctttgcgga acactataaa ctgaacgcaa tgggcattaa aacttttttt
     2701 acacatcctt acagctccca ggaaaaagga tctgttgaaa accggatcgg gctcatccga
     2761 attttttttc cgaaacaatc tgtgttcagt gaagtgagcg atcaaagagt gaagtccgtg
     2821 cagaatatga taaacaatcg accgctacga atgtttgatt ataaaagtcc aaaagaaatt
     2881 tatatatcct accctataaa actaaaaacc taacctttgc attaattaat tgaactcggc
     2941 attgagcatt gccgagttca attgattatt gaatattttc tccgttaacg tttagtctcc
     3001 cgagttaccc cgaacctaca acagctcttt attcctgatc tccgctccat caaatagttt
     3061 gtaaaaactc ttttttgaag caaggctttt aagccctttg agatggtttt cgtgatgcat
     3121 gtcggtgcca accaacgaca ccattttttt cttcagcaag ttttgtgcgg tatttttaac
     3181 gggctcgcca tagtagccga gcagcgaaag aatgtttatt tgcaaaagac atccgagatc
     3241 caaaaaacga tcgtattgat cgggtgttcc caggtaataa ttgtatcgct caggatgtgc
     3301 caatactggc tgcagtcctt taatacgtag ctgaaaaatg
//
LOCUS       DASQJI010000224         2397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_328893,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000224 DASQJI010000000
VERSION     DASQJI010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328893"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(379..1608)
                     /gene="rocD"
                     /locus_tag="VEV83_06540"
     CDS             complement(379..1608)
                     /gene="rocD"
                     /locus_tag="VEV83_06540"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HYK44804.1"
                     /translation="MLTHTLSDITQRYLELEDDFGAHNYHPIPVVLEKGKGVYVWDVD
                     GKKYFDFLSGYSALNQGHCHPRIVQALVDQAQKLTLTSRAFYNNLLGEYAKFITAYFG
                     YDKVLPMNTGVEAVETAIKLCRRWGYANKKIKDGEAKIVVCENNFHGRTTTVISFSSD
                     AQSYTKFGPYMPGFIIIPYNDTEALQKALDDETVAGFLVEPIQGEAGVVVPDEGYLSK
                     AKQLCEAYNVLFIADEIQTGLSRTGKMLACDHENVRPDMLLLGKALSGGTIPVSAVLA
                     DDDIMLTIKPGEHGSTYGGNPLACAVAVESLKVLKEENMSENAEVMGELLRSELRKLN
                     SPFISTVRGKGLLNAIVIDHPNKEAAWELCITLKENGLLAKPTHGDKIRFAPPLIITK
                     SQIMECVDIISDSLVCL"
     gene            1962..2198
                     /gene="rpmB"
                     /locus_tag="VEV83_06545"
     CDS             1962..2198
                     /gene="rpmB"
                     /locus_tag="VEV83_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HYK44805.1"
                     /translation="MARVCDVTGKKPLRGHHVSHSNIKTNRRFLPNLQTKRFYFAEED
                     RWVTLKVSTDAIRTINKKGLSAVIKELRANGVHI"
     gene            2214..2396
                     /gene="rpmG"
                     /locus_tag="VEV83_06550"
     CDS             2214..2396
                     /gene="rpmG"
                     /locus_tag="VEV83_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013616632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HYK44806.1"
                     /translation="MAKKGNRVQVILECTEHKNSGQPGTSRYISTKNKKNTPERLELK
                     KFNPILKKVTVHKEIK"
BASE COUNT          707 a          514 c          506 g          670 t
ORIGIN      
        1 aagtgtagaa aagtgttttc ataattttca atttaggtat gtaaaagaac tgttgggaaa
       61 atttttagca gaacggaaaa ggtacgaata attcgaatga acaaaaaatg tccggtcttg
      121 tccggagctc tcccaaacta ctctgcattt atttgcgatc aagggatatc atgcaatggt
      181 ttcgtttcag tgaagatgca ttgcactggt gcaagaagcc gtcaaaagtt ttccgatgga
      241 attgtatatg gccggacgaa gcttctttga tgaagcgcgc gatcagacac ccgttttgag
      301 atttcagtac gtgaagaata cgtaagctgg ccttcaattg ccattacgct taagtgcttt
      361 aaaaacagtc tgcaattatt acaaacaaac aagtgaatcg ctgataatgt cgacacattc
      421 catgatctgt gattttgtga tgatcaatgg cggcgcaaac cggatcttgt ccccgtgcgt
      481 tggttttgcc aataaaccgt tttctttgag cgtaatgcac agttcccatg cagcttcttt
      541 gtttggatga tctattacaa ttgcattaag caaccctttt cccctaacag ttgaaatgaa
      601 cggagaattg agtttacgca gttcgcttcg caataactcg cccatcactt ccgcattttc
      661 agacatgttc tcttctttta atactttgag cgattccacc gcaactgcac aggccagcgg
      721 attgcctccg tacgttgagc cgtgctcgcc tggtttaatg gtcagcatga tgtcatcatc
      781 agcaagtacc gctgaaacgg gaatcgttcc tccgcttaat gcctttccaa gaagcagcat
      841 atcgggcctt acattctcat gatcacacgc gagcattttg cccgtgcgcg acaaaccggt
      901 ttggatttcg tcggctatga acaaaacatt gtatgcttca cacaattgtt ttgcctttga
      961 taaataaccc tcatccggaa ctactactcc cgcttcgccc tgtatgggtt ctaccaggaa
     1021 gcctgcaacg gtttcatcgt caagagcttt ttgaagggct tcagtatcgt tgtacggtat
     1081 gataataaag ccaggcatgt aaggaccgaa ctttgtgtag gactgcgcat cggaactgaa
     1141 agagatcact gtagttgttc gcccgtgaaa attgttttca cacactacga tcttcgcctc
     1201 accgtctttt atctttttat ttgcgtatcc ccagcgacgg cacaatttaa ttgcagtttc
     1261 tacggcttca acacccgtat tcatcggaag caccttgtca taaccaaaat atgcggtgat
     1321 aaactttgca tattcgccca ataggttgtt ataaaatgca cgggatgtta acgtaagctt
     1381 ttgagcctgg tctaccagtg cctgcacgat tcgtggatga caatggccct ggttgagtgc
     1441 agaatacccg ctcagaaagt caaaatattt ttttccatca acgtcccaga catagacgcc
     1501 ctttcccttt tcaagcacca ctggtattgg gtgataatta tgagctccaa aatcgtcttc
     1561 aagttcaagg tagcgttgcg ttatatcgga taaagtatga gtgagcataa aaaattagaa
     1621 ataaggaatt agacaataag aaataagaaa cgaggaaatg tagccgaagt aacgggccgt
     1681 aaataataga attcgttagt gattaagtat atccaaattg cgggagagaa agttcattct
     1741 taaacggttc ggtccgcaag atacaatttt actcgaattt tttagccacc acaagcatac
     1801 tcttgagttt cttccgagta ttcacttgct cttgcgggtt gatgaaacgt caagcaacgc
     1861 cataaggaca tctgattcag agcatacttt acaaaaactt tacaaatcgt tgcagtttat
     1921 tcgctgtgtt tcgttacctt tgccgtccga aaaattgatt tatggcaaga gtatgcgatg
     1981 ttacgggtaa aaagccattg cgcggtcatc atgtgtctca ctcaaacatt aagaccaatc
     2041 gccggttttt accaaacctg cagacgaaac gcttctattt tgctgaggaa gacaggtggg
     2101 tcaccttaaa agtatctacc gacgcgatcc gtaccatcaa caaaaaaggt ttgtcggcag
     2161 tgatcaagga gttgagagca aacggagttc atatttaata aaacgaggtt acaatggcaa
     2221 aaaaaggaaa cagggtccag gtgatcttag aatgcaccga gcataaaaac agtggacaac
     2281 cgggtacgag ccggtacatt tctaccaaga acaaaaagaa tacgccggaa cgtcttgaat
     2341 tgaaaaaatt caaccccatc ctgaaaaagg tgactgttca taaagaaatc aaataaa
//
LOCUS       DASQJI010000225         8621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_21751,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000225 DASQJI010000000
VERSION     DASQJI010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8621
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21751"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VEV83_06555"
     CDS             complement(<1..485)
                     /locus_tag="VEV83_06555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44807.1"
                     /translation="MNVILIDDEPLARSIVREYLEHYNEVQVVAECNDGFEGLKAIQL
                     HEPDLIFLDIQMPKINGFEMLELIEEPPPVIFTTAFDEYAIKAFESNAVDYLLKPFSK
                     ERFDKAIQKYLQQQKPSSEKTQAVLDSAAHSPVQQNRIVVKDGSKIKIIPVIQIHYIE
                     AA"
     gene            complement(482..1519)
                     /locus_tag="VEV83_06560"
     CDS             complement(482..1519)
                     /locus_tag="VEV83_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44808.1"
                     /translation="MRSFLSDRRFIIAFTAWWLAWAQLHAVVLNKFGLPFPVAFPDSV
                     VSNSLLAACCLLIGMNMQYYLPRKERFWYILVVSSVMSVIWLFISKFFLRWIFSADDD
                     YTAMLSQSMLMRFGIGFLVIGCMAMISMTWYSQQEQKQMDQRKAEAEQLAKEAELFKL
                     RQQLQPHFLFNSLNSISALTGNQPEKARNMINQLSEFLRGTLKKDEKQWNTLSEEIQY
                     LQLYLDIEKVRFGYRLQTEVLCDENSLDLKLPAMLLQPVVENAIKFGLYDTTGEVMIT
                     IRAKKQDNYLEVTVQNPFDPETSQPLKGTGFGLASIQRRLFLLFARQDLLKTEKENDH
                     FITTILIPQTI"
     gene            complement(1523..1882)
                     /locus_tag="VEV83_06565"
     CDS             complement(1523..1882)
                     /locus_tag="VEV83_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4288 domain-containing protein"
                     /protein_id="HYK44809.1"
                     /translation="MKWYLAKLVYRIICGDGEHTPQFDEQLRLISADDEMHAFQKSRL
                     LGHREQDNFLNASDKPVHWKFIDVAELHELSELSDGIEIYSRISEEDDASLYTQLVML
                     RAAHLLENSMYQTMHFN"
     gene            complement(1987..2790)
                     /locus_tag="VEV83_06570"
     CDS             complement(1987..2790)
                     /locus_tag="VEV83_06570"
                     /inference="COORDINATES: protein motif:HMM:NF021443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HYK44810.1"
                     /translation="MEQDENRPYTRHHTGHIFSGLLLLAAGGLLLASRMGAPVPGWLF
                     NWYTLLIVIGLFIGIKSNFRNPGWVIMCTIGGFFLLDDVVPGYNLHNYILPFILITIG
                     VYFIMRPRGEWKKDRHWQRMERRTDRWHRRDAGSGIPPQVTTHTDFEGTPDEGEYIDV
                     AAVFGGVKKLILSKNFKGGEMNCFMGGTEINLLQADIQRPISLEVNAVFGGAKIIVPS
                     NWDVKNQVTAVFGGLEDKRSMNSGTPDPNKTVTLTGTVVFGGIEIKNFA"
     gene            complement(2930..3742)
                     /locus_tag="VEV83_06575"
     CDS             complement(2930..3742)
                     /locus_tag="VEV83_06575"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HYK44811.1"
                     /translation="MELKSLIVEAWDNRELLKEENYIHAVKCVIEELDKGRLRTASPA
                     DNGWQVNEWVKQAILLYFSIQQMQTWDVPPFEFYDKMFLKRNYKQLGVRAVPHAVARY
                     GAYLAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKAVHLSGGVGIGGVLEPV
                     QASPVIIEDGCFIGSRCIVVEGVVVEKEAVLGANVVLTQSTKIIDVTKSSPIEYKGRV
                     PSRSVVIPGTYNKDFAAGSFGVSCALIIGERKDSTNLKTSLNECLRDFNVSV"
     gene            3858..4889
                     /locus_tag="VEV83_06580"
     CDS             3858..4889
                     /locus_tag="VEV83_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK44812.1"
                     /translation="MQKFLIIQTAFPGDVILATVIIEKLHACMPAAEIDFLLRKGNEE
                     LLDGHPYLSEILAWDKKQDKTSNLLRLINIIRRKKYDKVINVQRFFSTGLLTAFSTAK
                     ETIGFDKNPLSFLFDKKIKHIIGTKEHPVHEVDRNLALVKHFACDADVRPKLYPSDRD
                     FNTVAAILNSNLKPQTSNLKQYICVAPSSVWFTKQYPKEKWISFLSQVPQQLPVFFIG
                     ANTDKDLCDAIIAGLPAHQSVNLCGQLSFLQSAALMKNAVMNYVNDSAPIHLASAMNA
                     PVTAIFCSTVTWFGFWPLSEKSIVVQKEEPLYCRPCTLHGKKECPEKHFKCALDIRDA
                     QLMASLHYD"
     gene            4882..5457
                     /locus_tag="VEV83_06585"
     CDS             4882..5457
                     /locus_tag="VEV83_06585"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HYK44813.1"
                     /translation="MIENEFDNDIEKALEVLQSGGIILYPTDTIWGIGCDATNTSAAQ
                     KIIDLKQRPAQKSFVVLVASERDVLKYTASPDLAVFGFLQTVEKPTTVIYEHALGLAE
                     NVINEDGSVAIRICNDEFCRHLIKRFRKPIVSTSANLSGEPPPGRFSEISLAIQQGVD
                     YIVQYQQSSPGVSKPSAIVRWTKGKAEFIRR"
     gene            5837..7246
                     /locus_tag="VEV83_06590"
     CDS             5837..7246
                     /locus_tag="VEV83_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HYK44814.1"
                     /translation="MPCYLIGGFVRDKLLNRNTKDLDIVCIGDGIQLAHEVADLFQPK
                     PAVTYFKNFGTANMKIRTSALPAGNDDPDNEDVFEIEFVGARKESYAHHSRKPKVEGG
                     TLQDDLSRRDFTINALAISLNKEDFGSLTDAFNGVQHLHAKIIKTPQEPSQTFSDDPL
                     RMLRAIRFATQLEFTIDDNTFKAIIENAERIKIVSQERITTELNKIMMATKPSAGWYL
                     LRASGLLKIIFPQFLDLQGAEYVDGIGHKDNFSHTLQVLDNISAHTHDLWLRWAALLH
                     DIGKPATKRFEEEHGWTFHGHEVVGAKMVPKIFVKLKLPQNEKMRLVQKLVLLHLRPI
                     SLTKENITDSAVRRLLFDAGDDIDALMLLCAADITSKNKAKVNRYLRNFDLVRKRLVE
                     VEENDRIRNWQPPITGEIIMQTFGLTPGKKVGVIKDAIREAILDGIIPNDYNAAYEFM
                     LQKASEIKLEPVQQNSALQ"
     gene            7358..7936
                     /locus_tag="VEV83_06595"
     CDS             7358..7936
                     /locus_tag="VEV83_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44815.1"
                     /translation="MAVLKFRAYFEEDDAVYRDIVIKHNQTFQDLHLAILKAYEFDNK
                     HQATFYRSNDQWQRGREISLEKYDKDYRAEPLMMANTTIGSEIRDTNQKFVYVYDFLK
                     NWTFLIELINVTKEESSKIIYPATSRVEGIGPQQYGTRSLLGKKFVDIEEKYELPQTS
                     EGFGEEGEEAGTEESADEALDEGSADEQEEEI"
     gene            8008..>8621
                     /locus_tag="VEV83_06600"
     CDS             8008..>8621
                     /locus_tag="VEV83_06600"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar nucleotide-binding protein"
                     /protein_id="HYK44816.1"
                     /translation="MKILITGANGFLGQHLSVYLKQKDFDVIATSRGECRIPSSFNIP
                     YYAAELTQRSDVEQLVSATKPDVIVHSAAMSKPDECENDREKCILYNVSATQFLLTAF
                     ERTAKANSHFIFTSTDFVFGEGGPHSENDVPEPINFYGESKLMAEKLLAETSVVCTIV
                     RPVFMYGPVWSGVRSSYLQQVKNALQQNQPIKAVSDQLRTPTYV"
BASE COUNT         2425 a         1918 c         1900 g         2378 t
ORIGIN      
        1 gctgcttcga tgtagtgaat ttgaatcaca gggatgatct ttattttgct tccgtctttt
       61 acgacgatgc gattttgctg cacgggtgaa tgcgctgccg agtcaagcac tgcctgggtt
      121 ttttccgaag aaggtttctg ctgttgcaaa tatttttgga tggctttgtc gaaacgctct
      181 ttgctaaacg gcttcaacaa ataatccact gcatttgact caaacgcttt gatggcatat
      241 tcgtcaaacg cggtagtgaa gatcaccggg ggcggttctt ctataagttc gagcatttca
      301 aagccattga tcttaggcat ttgtatatcc aggaaaatta gatctggttc atgcagctga
      361 atagccttca acccttcaaa cccgtcatta cattcagcga cgacctgcac ttcattgtaa
      421 tgttccaaat actctcttac aatgctcctg gcgagcggct cgtcatcaat aagaattaca
      481 ttcatatggt ttgaggaata agaattgttg tgataaaatg atcattttct ttttctgttt
      541 taagaaggtc ctgccgcgcg aataacaaaa ataatcttct ctgtatagac gcaagtccga
      601 agcccgttcc ttttagtggc tgcgacgttt ccgggtcgaa tggattctgc accgtaactt
      661 ctaaatagtt gtcttgtttt tttgcccgga tcgtgatcat cacttcgccc gttgtatcat
      721 acaatccaaa tttgatcgca ttttcaacaa caggttgcaa caacatggcg ggaagtttta
      781 gatcaagcga attttcatcg cacaaaactt ctgtttgcag ccggtacccg aaacgaacct
      841 tttcaatatc gagatacagt tgcaggtatt ggatctcttc tgaaagcgta ttccattgct
      901 tctcgtcttt ttttaaggtt ccgcgtaaga actcgctcag ttggttgatc atgtttcttg
      961 ccttttccgg ttgattgccg gttaaggccg atatcgagtt caggctgttg aataaaaaat
     1021 gtggctgtag ctgttgcctc agtttaaaca actcagcttc ctttgccaat tgttctgctt
     1081 cagcttttct ttggtccatt tgtttttgtt cctgttgcga ataccatgtc atgctgatca
     1141 tggccatgca accaattaca aggaacccga tcccgaaccg catcagcatc gattggctga
     1201 gcatcgctgt atagtcatca tcggcgctaa atatccagcg aagaaaaaac tttgagatga
     1261 agagccagat aacactcatc accgagctga ccactaaaat gtaccaaaac ctttcttttc
     1321 ttggaaggta atattgcata ttcattccaa tgagcaaaca acatgcggcc agtaaactgt
     1381 tacttacaac gctgtcggga aatgcgaccg ggaacggtaa accaaatttg ttcagcacga
     1441 cagcatgcaa ctgagcccac gcaagccacc aggcagtaaa cgcgatgata aatctcctgt
     1501 cggataaaaa gcttctcaca atttaattga aatgcatagt ttggtacata ctgttttcca
     1561 gtaagtgggc agcgcgtagc atcactagtt gcgtgtacag cgatgcatcg tcttcttcag
     1621 agatgcgcga ataaatttca ataccgtcgc ttagttcact gagctcatga agttctgcaa
     1681 catcaataaa tttccagtgc acaggtttgt cggaagcgtt taaaaaatta tcctgctcgc
     1741 gatgtcccaa caatcttgac ttttggaaag catgcatctc gtcgtctgcg gatattaagc
     1801 gcaattgctc gtcaaactgc ggcgtgtgtt ctccatctcc gcaaataatt cgatagacca
     1861 gttttgcaag ataccatttc atacttgttc gtttgatctt tgaaagtgtt gattagtttt
     1921 aatctttcaa tttggtacgg atcttttctc aggaaagtaa ggtctgcgga ttgcacggaa
     1981 tgatcatcat gcaaaattct tgatctctat tccgccgaac acaactgtcc cggttaacgt
     2041 taccgtttta ttgggatccg gtgttccgct attcatgctg cgtttgtctt caagtccgcc
     2101 aaacaccgcg gttacctggt tcttcacatc ccagtttgac ggtacaatta tttttgcgcc
     2161 accaaacact gcgttcactt caagtgatat cggccgctgg atatctgcct gcagcaagtt
     2221 gatctcggtg ccacccatga agcaattcat ttcgccgcct ttgaagttct ttgaaagaat
     2281 aagctttttg acgccgccaa aaactgcagc aacatcaatg tattcgcctt cgtctggtgt
     2341 gccttcgaaa tctgtatgag tagttacttg tggcggaatg ccagacccgg cgtcgcgcct
     2401 gtgccatcgg tcggtgcgtc tttccatacg ttgccaatgc ctgtcctttt tccactcgcc
     2461 tcttggtcgc attatgaagt atacaccgat cgtgatgaga ataaatggaa gaatgtaatt
     2521 atgaaggttg tatccgggca ccacgtcatc aagtaaaaag aaaccgccta tagtgcacat
     2581 tatcacccat ccggggtttc tgaaattgct tttgatgcct atgaataaac cgatcacgat
     2641 caacaatgtg taccagttaa acaaccagcc gggaaccggc gcacccattc tgctggcaag
     2701 taataaaccg ccggctgcca aaagcagcaa gccactaaaa atatgacccg tgtggtgcct
     2761 tgtatatggt ctgttttcgt cctgttccat gattattgcg tttgataaga caaagctata
     2821 cacacgattt ccatcgcgaa agagcggata ggtttacgaa ttgaaaacgt aggtaaacgc
     2881 aggaaatacg taggcgaatg aaaaagtgaa gttgttgcct ggagccgaat tacacggaca
     2941 cattaaagtc tctcaggcat tcattcaagc tggtcttgag atttgtgctg tctttgcgtt
     3001 cgcctatgat cagggcgcag ctaacaccaa acgagcctgc ggcgaaatct ttgttgtatg
     3061 tgccgggaat taccacactt cgtgatggca cacggccttt atattctata ggcgaagact
     3121 tcgttacgtc aattattttt gtggattgtg tgagcactac atttgctcca agcaccgcct
     3181 ctttttcaac aaccacgcct tccaccacaa tgcagcggct gccgatgaaa caaccatcct
     3241 cgataatgac cggcgaagct tgtacaggct cgagcacgcc accgatacca acgccgccgc
     3301 tcaagtgaac agcttttcct atctgcgcgc aactgccgac agttgcccag gtgtccacca
     3361 ttgtgccctc gtcaacatag gcgccgatgt ttacatagct cggcatgagg acgacgtttt
     3421 ttgcgaggta tgctccatag cgcgccaccg catgtggtac cgcacgtacg ccgagttgtt
     3481 tataatttct ttttagaaac attttgtcgt aaaattcaaa tggcggcaca tcccacgttt
     3541 gcatctgttg aattgaaaag tagaggagga tcgcttgttt tacccattca ttcacctgcc
     3601 atccattgtc agctggagaa gcggtgcgta accttccctt atcaagctct tcgataacgc
     3661 atttcaccgc gtgtatataa ttttcctcct ttagtaattc gcggttatcc cacgcttcaa
     3721 caatgagcga ctttaattcc attgccgatt tttttacgaa gatacaaatg gacctttcag
     3781 ctacgaatga aattaatacg ggtcaggcga atatgtattg ttccgtctca cactatgcat
     3841 ggcataactt tgccacgatg caaaaattcc tgatcattca aacagctttt ccgggcgacg
     3901 taatattagc tacggtgatc atcgaaaagt tgcatgcatg tatgcctgcc gcagaaatag
     3961 attttctttt acgtaaagga aacgaagagc tgttggatgg tcatccatat ttgagcgaga
     4021 tcctggcgtg ggataaaaag caggataaga caagcaatct tttaagattg atcaacatta
     4081 tccgcagaaa aaaatatgac aaggtgataa atgtgcagcg attcttttca actggtctgc
     4141 tgactgcttt ttccaccgca aaagaaacga taggttttga taaaaatccg ctaagctttt
     4201 tatttgacaa gaaaataaaa catatcattg gcacgaaaga acacccggtg catgaagttg
     4261 accgcaacct cgcgctcgta aaacattttg catgcgatgc agacgtgcga ccgaaattat
     4321 acccgtctga ccgcgatttc aacaccgtcg cagcgattct gaattcaaac ctcaaacctc
     4381 aaacctcaaa cctcaaacaa tatatctgcg tcgcgccctc ttcagtttgg ttcacgaaac
     4441 aatatccaaa agaaaagtgg atctcattcc tttcacaagt gccgcaacaa ttgccggtat
     4501 tttttattgg agccaatacc gataaagatc tgtgcgacgc gatcatcgcc ggtttaccag
     4561 ctcatcaaag cgtgaattta tgcgggcaac taagttttct gcaatccgcc gccttgatga
     4621 aaaacgccgt gatgaactat gtaaatgatt ccgcgcctat tcatcttgca tcagcaatga
     4681 atgctccggt aacagcaata ttctgttcaa cggttacatg gtttgggttt tggcctttga
     4741 gcgagaaaag tattgtcgtg cagaaagaag agccgctata ttgcaggccg tgcactttac
     4801 atggaaaaaa agaatgtccg gaaaaacatt tcaaatgcgc attggatata cgcgacgcac
     4861 aattaatggc aagcctgcac tatgattgaa aacgaattcg ataacgatat tgagaaggcg
     4921 ttagaagtat tgcaaagcgg tgggatcatt ctttatccga cagatactat ctggggcata
     4981 ggctgcgatg ccacaaacac aagtgcagcg caaaagataa tcgaccttaa acaacggccc
     5041 gcgcaaaaaa gttttgttgt gcttgttgcc tcggaaaggg atgttcttaa gtataccgct
     5101 tcccctgacc ttgctgtgtt cggcttcctg caaacagttg aaaaaccaac caccgttatt
     5161 tacgagcatg cgcttggcct tgccgaaaac gtgatcaacg aagatggttc agttgccatc
     5221 cggatttgta atgacgaatt ttgccggcat ctgatcaaac gttttcggaa acctatagta
     5281 agcacttcag caaatttgtc cggtgagccg ccgcccggcc ggttttccga aatttcactt
     5341 gccatacaac aaggtgtaga ttatattgta caataccaac agtccagccc gggcgtgagt
     5401 aaaccatccg caatcgttag atggacaaag ggaaaagctg aatttatacg gcgctaagcg
     5461 aggcgactag tgtgattccg ctttttgcat ggtttttgga tttcagactc attatctcat
     5521 caataatggt tttatgtcga aagttcatgc agcagaacag cctaagaaac cgtcttcaat
     5581 tagtacattc cacgcgataa agaataaccg gcgtacgcgg tccagaacaa agtctccgga
     5641 cagaaatatt cttcagcata tttttcatcc ggattatatt ttattcgact gggagttttt
     5701 tagtcgcgag cttgagtttg aataatatac atgctccttt tttacagccc tatctttgca
     5761 gactatggat attagctgta gcagcaaaga gttatttgtc cttcgaaaga tagcaaaggc
     5821 atcagaaaaa ttagaaatgc cttgctatct gatcgggggg tttgttcgcg acaaactgct
     5881 taaccgtaac acaaaagacc tcgatatagt ttgcattggc gatggtattc aacttgcaca
     5941 tgaagtcgcg gatctctttc agccaaaacc ggcggtcacg tatttcaaaa atttcggaac
     6001 ggcgaatatg aagatccgaa cgtcggcgct ccccgcgggc aacgatgatc cggataatga
     6061 agatgtattt gagattgaat ttgtcggcgc aagaaaggaa agttatgcgc accatagtcg
     6121 taagccaaaa gtggagggag gtacgctgca agatgatctc tcgcgacgcg actttacgat
     6181 aaatgcgctc gcaattagtt tgaacaaaga agattttggc agtctcaccg atgcgtttaa
     6241 cggcgttcag cacctgcatg cgaaaatcat caaaactccg caggagcctt cgcaaacatt
     6301 cagtgatgat ccgttgcgga tgctacgtgc gattcgtttc gcgacgcaac ttgagtttac
     6361 catcgatgac aacactttca aggctatcat tgaaaacgct gaacggatca aaatagtttc
     6421 gcaggaaagg atcacaactg agctcaacaa aatcatgatg gctacaaaac catctgcagg
     6481 atggtatttg ttacgggcaa gtggtttatt aaaaattatc ttccctcagt tccttgatct
     6541 gcagggcgcc gagtatgttg acggaattgg acataaagac aatttctcgc atacactgca
     6601 ggtgctcgat aacatttccg cgcacacgca tgatctttgg ctgcgctggg ctgctttatt
     6661 gcacgacatc ggcaagcctg ccaccaaacg tttcgaggaa gaacatggat ggacatttca
     6721 cgggcacgaa gtagtgggtg cgaaaatggt cccgaaaata tttgtaaaac ttaagctgcc
     6781 ccagaatgaa aagatgcgtc tggtgcagaa gctcgttctc ctgcacttac gtccaatcag
     6841 cttaacaaaa gaaaatatta ccgacagcgc cgtaaggcgt ttattgtttg atgcgggcga
     6901 cgatatcgac gcgctcatgc ttttgtgcgc agcagatatt accagcaaga ataaagcgaa
     6961 agtgaaccgg tacctcagga actttgatct tgtgcgcaaa cggctcgttg aagtggaaga
     7021 gaatgaccgt attcgcaact ggcagcctcc gatcaccggg gaaattatca tgcaaacatt
     7081 tggcttaacg ccgggtaaga aagtcggtgt tattaaagat gcgatcaggg aagcgattct
     7141 tgatggcatt attccgaatg attataatgc tgcttatgaa tttatgcttc aaaaggcatc
     7201 cgagatcaaa ctcgagccgg tccagcaaaa ttcagcgctg caataacaat tttttttctt
     7261 atgttgccaa ttggtgtatt tgaatgtatc aatcgtggta gattttttga gagagagtaa
     7321 taaccaacaa taaaagatga agtaaataag ctactcaatg gcagttttaa aatttcgggc
     7381 atattttgaa gaggatgatg cggtgtacag ggacatcgtg ataaaacata accagacatt
     7441 ccaggacctg catcttgcga tcttaaaggc gtacgagttt gataataaac accaggcgac
     7501 attttatcgc agcaatgacc aatggcaacg cggccgtgaa atttctttgg aaaaatatga
     7561 taaggactat cgggcggagc cactcatgat ggccaacacg accattggca gtgagatacg
     7621 ggatacgaac cagaaatttg tttatgtgta tgactttctt aagaactgga catttttgat
     7681 cgagttgatc aatgtgacga aagaagaaag tagcaagatc atctatcctg caacgtcaag
     7741 agttgaagga attggcccgc agcaatatgg aacgagaagt ttgcttggca aaaaatttgt
     7801 cgacatcgaa gaaaaatatg aattgccgca aactagtgaa gggtttggtg aagaaggaga
     7861 ggaggcgggt acagaagaat cagcagacga agctttggat gaaggaagtg ctgatgaaca
     7921 ggaagaagag atataatcga tcgaatatta acagcataaa attctgagct catacatcga
     7981 taaccttgtg tttcttttga gcgaacaatg aaaatcctca tcaccggcgc aaacggattt
     8041 ctcggccagc atttatctgt ttatctaaag caaaaagatt tcgacgttat cgcgaccagt
     8101 cgtggtgaat gccgcatccc ttccagcttt aatattccat actatgctgc cgagttaacg
     8161 cagcgctccg atgttgaaca attagtatcg gcaacgaagc cagatgtgat cgttcattcc
     8221 gctgctatga gcaaacctga cgaatgcgaa aatgatcgtg aaaaatgtat tttatataac
     8281 gtgtctgcta cacagttctt gttgaccgca tttgaaagaa ctgcaaaagc aaattcacat
     8341 ttcatcttta cttcaaccga ttttgttttt ggcgaaggcg gaccgcacag cgaaaatgat
     8401 gttccggaac ccataaattt ttacggtgaa agtaaactga tggctgaaaa attacttgcc
     8461 gaaacgtcgg tcgtttgtac gatcgttcgt cctgtgttca tgtatggtcc tgtctggagc
     8521 ggagtgcgat ccagctatct gcaacaggtt aaaaatgctc ttcagcagaa ccagcctatc
     8581 aaagctgtca gcgatcagct ccgcacgcct acctatgttt a
//
LOCUS       DASQJI010000226         2746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1096828,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000226 DASQJI010000000
VERSION     DASQJI010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096828"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..529
                     /locus_tag="VEV83_06605"
     CDS             146..529
                     /locus_tag="VEV83_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44817.1"
                     /translation="MTQAKLQTNKTKKILIVEDEADMCLLLNIMLTGKETELDHVKSL
                     SAAREYLENEQPSVVILDNRLPDGFGVDFISYIKENYPQVKIVMISGLGPSAKDVALY
                     NGADLFLEKPFTKEQMYKSVQTLLN"
     gene            complement(511..1074)
                     /locus_tag="VEV83_06610"
     CDS             complement(511..1074)
                     /locus_tag="VEV83_06610"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HYK44818.1"
                     /translation="MLYFIAIIPPKEVCDEITDFKKDIATRFESKAALRIIPHITLKA
                     PFQLPASDHDRVLDWFQKAVISVSPFVQELKNFGSFKNGRSAVIFVKPEMNNGLDQLQ
                     KEVLTNFVDHFSAEQVMKSETDFHPHITIGYRDLRPSMFKQAWAEYRLKQYSAAFTVT
                     SFDLLQHDKHVWNSISNFVLPDQFNNV"
     gene            complement(1101..1751)
                     /gene="nth"
                     /locus_tag="VEV83_06615"
     CDS             complement(1101..1751)
                     /gene="nth"
                     /locus_tag="VEV83_06615"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HYK44819.1"
                     /translation="MATKVDWKEAIKPLLKKYKGKRHPLNYESVYQLVVMVVLSAQDS
                     DRNINSIAPKLFEAFPDMRALSKATVETLTPFIGKVRNFRNKGKWLIEIAQAVKTDKQ
                     IPLTQDELTELPGIGNKSANVILREAGKPPEGVIVDLHVVRVAPRLGIATGTDPKKIE
                     KQIMEALPKKDWDAGMAMSFLGREICRPKPKCEICLMRPVCKYYQEVISKDPSRKV"
     gene            complement(1805..>2746)
                     /locus_tag="VEV83_06620"
     CDS             complement(1805..>2746)
                     /locus_tag="VEV83_06620"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HYK44820.1"
                     /translation="IAYIHPSIIFKNLAMNKTNHLILVFVSACITCASCKKEPVTSSA
                     VSGSRTDNNTSVNANAICDYDLNETTLTSAGWTKVFEDNFSGDLSKWNTWTGGAFNNE
                     LQYYQGANLQVQNGTLLITAKKETVTGATTPFDATPKTFNYTSGRIECKTNISASSAT
                     PKVRVIGRLKLPPGYGMWPAFWSYGDPWPQQGEIDYMEARGQEPTKYQTNYFYGRAAN
                     RNLVKNQVGFITANLDLQSCWHVYEMIWTQNSLTFMLDGQVVITNTGSYVPNLFGKTE
                     RVTLNLAVGGNFFTNFNPALIQTGTYAIDWIKVFTSN"
BASE COUNT          686 a          620 c          609 g          831 t
ORIGIN      
        1 attgtctggt tgtcattttt tagcctttct gaaattcttt tgatcaattc tctgtcgaac
       61 atttttcata gatttagttc accactcaaa attgcatgcc agcctgcagt ttggtaaaga
      121 aattgcatgc taccagaaaa aagacatgac acaggctaaa ctgcaaacca acaaaacaaa
      181 aaaaatactt attgttgaag acgaagctga tatgtgctta ttgctgaaca tcatgctaac
      241 cggcaaggag acggagctcg accacgtaaa aagcctttcg gctgcgcgcg agtatcttga
      301 gaatgaacag ccttccgtgg tgatccttga taacaggctt ccggatggct ttggcgtcga
      361 tttcatcagt tacattaagg aaaattatcc gcaggtgaag atcgtcatga tctcgggact
      421 tggtccttca gcgaaagatg ttgcactata taacggcgca gaccttttcc ttgaaaagcc
      481 gtttaccaaa gagcagatgt ataaatctgt tcaaacatta ttgaactgat ctggcaatac
      541 aaaattgctg atagaattcc acacatgttt gtcgtgctgt agcaggtcga aacttgttac
      601 tgtaaaagct gctgaatatt gcttcaaccg gtattctgcc catgcttgtt tgaacatcga
      661 aggtcgtagg tcccggtaac cgatcgttat atgaggatgg aagtcggttt ccgatttcat
      721 gacctgttcc gctgaaaaat gatcgacgaa gtttgtaagt acttcctttt gtagttgatc
      781 caggccatta ttcatttcgg gttttacaaa gatcaccgcg ctacgcccgt ttttaaaaga
      841 gccaaagttc ttaagctcct gcacgaaggg tgaaactgag ataacagcct tttgaaacca
      901 atcaagaaca cggtcatggt cggaagccgg caattgaaag ggagctttta gcgtgatatg
      961 cgggatgatc cttagtgctg ctttgctttc aaagcgtgta gcaatatctt ttttgaaatc
     1021 ggttatttca tcacagactt cttttggcgg tattatcgca atgaaatata acacctgttc
     1081 gatcgatcaa ttaattgagt tcacactttg cgcgacggat cttttgagat cacttcctgg
     1141 tagtatttgc acacgggtct catcaggcag atctcacatt tcggtttagg cctgcaaatt
     1201 tctcttccca aaaacgacat cgccataccg gcgtcccaat ccttctttgg aagcgcctcc
     1261 atgatctgct tttcgatctt ctttggatca gtgccggtcg caataccaag cctcggcgcc
     1321 acgcgtacca catgcagatc aacgatcact ccttcaggag gttttcccgc ttctctcaat
     1381 atcacgtttg ccgatttgtt tccgatgccc ggcaattcgg tcagttcatc ttgtgtgaga
     1441 gggatctgtt tatcagtctt tacagcctgc gcaatttcga tcaaccattt tcccttgttc
     1501 cgaaaattcc tgacttttcc aatgaacgga gttaacgttt cgacggtggc tttcgaaagg
     1561 gcgcgcatat cgggaaacgc ctcaaacaac tttggcgcga tcgagttaat attcctgtca
     1621 gagtcctgtg cggacagaac taccatcacg acgagttggt atacactttc atagttgagc
     1681 gggtgcctct tacctttgta ttttttcagc aagggtttaa ttgcttcctt ccaatccact
     1741 ttcgtagcca tagaaaattt ttaaagacgt atctgctgac ggtcttttcc tgacttgtat
     1801 ttaattaatt tgacgtaaag actttgatcc aatctatagc gtatgttcct gtttggataa
     1861 gagccggatt aaaattcgta aagaagtttc cacccaccgc gagattgagt gtaacgcgct
     1921 cggttttgcc gaataaattt ggaacatagc tgccggtgtt agtgatcacc acttgcccgt
     1981 cgagcataaa cgttagagaa ttttgtgtcc agatcatttc atacacatgc cagcaactct
     2041 gaagatcgag gttcgcggtg ataaacccca cctggttctt taccaggttg cggtttgcag
     2101 cacgcccata gaaatagttc gtttgatatt ttgtcggctc ctgcccgcgt gcttccatat
     2161 aatctatttc gccctgctga ggccatggat cgccgtagct ccagaacgcc ggccacatgc
     2221 catatccggg tggcagtttc aacctgccga tcacccgtac ttttggtgtg gctgatgaag
     2281 cagagatatt tgttttgcac tcgatcctgc cggaagtata gttaaatgtt ttcggtgtgg
     2341 catcgaacgg cgtagttgcg ccggtcaccg tttccttttt tgcggtgata agcaacgtgc
     2401 cattttgcac ctgcaggttt gcgccctggt aatattgcaa ttcattgttg aaagcgccgc
     2461 cggtccaggt attccatttg ctcaaatcgc ctgagaaatt gtcttcaaaa acttttgtcc
     2521 atccggccga cgtcaatgtt gtctcattaa gatcgtaatc gcaaattgcg tttgcattga
     2581 ctgatgtgtt gttgtctgta cgcgatccgc taactgcgga gctggttacc ggttccttct
     2641 tacatgacgc gcatgtaatg caagctgaca cgaaaacgag tatgaggtga ttggttttgt
     2701 tcatggcaag gtttttaaag attatcgatg gatgaatgta agcaat
//
LOCUS       DASQJI010000227         3072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1096848,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000227 DASQJI010000000
VERSION     DASQJI010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096848"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2736
                     /locus_tag="VEV83_06625"
     CDS             <1..2736
                     /locus_tag="VEV83_06625"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK44821.1"
                     /translation="NNDAHFNSNFGYNSYLRTVRDTINGDHLYRNDNGKFVDVSGQAG
                     IFQSAIGFGLGVTVSDLNNDGWEDIYVSNDFFERDYLYINQHNGTFKEVLDSAMGHSS
                     QGSMGSDIADINNDGYVDVFTTEMLPESDYRLKTNIKFDEYDIENEKHLQDFHHQLTS
                     NCLQLNNQDGTFSEIAQLAGIDATGWSWGALSFDFNNDGWKDIFVCNGLYRDLTDQDF
                     LAFFGNDATLQKIKTGQVSWNDLIDKMSSVPIPNYAFVNQRDLLFKNESNSLGFDKPS
                     FSNGAAYGDLDGDGDLDLVINNVNMPAFIYRNMASEKLHHHYLKIRLKGGDENIFGYG
                     ARVAIYYKGGQQVLEQQPGRGFQSSVDPELIFGLNDATSVDSLSVKWTNNKVQKLISV
                     KADTTLVLNEQDAHLDYRAPAVAGSQLYMNVAAKQVDGNIIHRENDYIDFDEEPLIPK
                     MLSTEGPKLAVADVNGDGLQDFFMGSASADTAKIFVQQASGSFIQKKEEDFIKDKYYE
                     DIGAAFFDADGDGDADLVVASGGNQARPGSPYLDTRMYLNDGKGNFARSKTFPAVPIN
                     ASCVRVDDYDNDGKPDIFIGGRCVPGNYGLIPQSALLKNDGNGLFTDVTKQVAPGLLN
                     VGMVTDAQWADIDNDGNKELVIAGDWMPVSIFKYVDHQLKKVRSIPNSGGWWNCLTIA
                     DINDDGRPDIVGGNLGANSRIKPDSSHPAKMYVGDFANNGKSICIPVYYKTDGKSYPY
                     FLKDDIEKQIPQLKKKFLHFSDYAGKSIDEIFTKDELNKASILTVTQTESLIYINQGN
                     YNFSAEYLPVMSQLSTVNGILVTDLNSDGIKDIFMAGNFYGLKPQGGRFDASFGITLL
                     GTASHKFFYMRPAESGLFVNGQARCIDTIKNARGENLILVGMNNGPLYMFKRKTD"
     gene            2845..>3072
                     /locus_tag="VEV83_06630"
     CDS             2845..>3072
                     /locus_tag="VEV83_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44822.1"
                     /translation="MKKNWIFSLIAICYAGVGHAQDPWIIKADTIDPSNYYGITVANG
                     MIGIVSSPEPFKVKDVVLAGAYDLYGRGRVSN"
BASE COUNT          928 a          561 c          729 g          854 t
ORIGIN      
        1 aacaatgatg cacattttaa tagcaacttt ggatacaata gctatttaag aaccgttcgt
       61 gatacgatca atggcgatca tttgtacagg aatgacaatg gaaaatttgt tgatgtaagt
      121 ggacaagccg gcatctttca aagcgcaatt ggctttgggc tgggtgtcac ggtctctgat
      181 ctcaacaatg acggatggga agacatttac gtttcaaatg atttttttga gcgcgactat
      241 ttatacatca accagcacaa cggcacattt aaagaagtat tggacagcgc aatgggtcat
      301 agtagccagg gctcaatggg ttccgatatc gcagacatca acaatgatgg ttatgtggat
      361 gtgtttacca cggaaatgct cccggagagt gattatcgtc taaagactaa tatcaagttt
      421 gacgagtatg atatagagaa cgaaaaacac ctgcaggatt ttcatcatca gcttacaagc
      481 aattgtttgc agttaaataa ccaggacgga acattcagtg agatcgcaca attggcaggc
      541 attgacgcga ccggatggag ttggggcgct ttgagttttg attttaataa tgacggctgg
      601 aaagatattt ttgtgtgtaa tggactttac cgcgacctta cagaccagga ttttcttgcc
      661 ttctttggta acgacgcaac gctacaaaaa atcaaaactg gccaggtaag ctggaatgat
      721 ttaattgata aaatgtcttc ggttcctatt cctaattatg cattcgtgaa ccaacgcgac
      781 cttttgttta agaatgaaag caattcgctg ggtttcgata aaccgagttt cagtaatggg
      841 gctgcgtatg gagatctcga tggcgacgga gatcttgatc tggtgatcaa caatgtaaat
      901 atgcctgcat ttatttaccg gaacatggct tcagaaaaat tgcatcatca ttatctaaaa
      961 ataaggttga aaggtggcga tgaaaacatc tttggttatg gcgcgagggt cgcgatctat
     1021 tataaaggcg gtcagcaggt actggaacaa cagcctggtc gcggttttca aagcagtgta
     1081 gatcccgaac tgatttttgg attaaatgac gctacgagtg tcgatagtct ttcggtaaaa
     1141 tggacgaaca ataaagtgca gaagttaatc agcgttaagg cagatacgac gcttgtatta
     1201 aatgaacaag atgcacatct tgattaccgt gcgccggctg ttgccggaag tcagttatac
     1261 atgaacgtgg ctgcaaaaca ggtcgacgga aacattattc atcgggaaaa tgattacatc
     1321 gatttcgatg aagagccgct tattcctaaa atgctttcga cggaaggtcc aaaacttgca
     1381 gttgccgatg taaacggcga tgggcttcag gattttttta tggggagtgc gagcgcagat
     1441 acagcaaaga tttttgttca acaagcgagc ggatctttta ttcaaaaaaa agaagaggac
     1501 tttataaaag acaaatacta cgaagacatc ggcgcagctt ttttcgacgc cgacggagat
     1561 ggggatgcag atttagttgt tgcatctggc ggaaaccagg ccaggcccgg ctcgccgtac
     1621 ctggatactc gtatgtattt aaacgacggc aaagggaatt ttgcacgcag caaaacattt
     1681 cctgccgttc cgataaatgc gtcctgtgtt cgggtggatg attatgacaa cgacggcaaa
     1741 cctgatattt ttatcggtgg cagatgtgtg ccgggcaact atggtcttat cccgcaaagc
     1801 gcattattaa aaaatgatgg taatggtctt tttactgatg ttactaagca ggtagcacca
     1861 ggattgctta acgttggaat ggttaccgat gctcaatggg cagacatcga taatgatggc
     1921 aataaggaat tggtcatcgc aggagattgg atgccggttt ccatttttaa atatgtggat
     1981 caccaattaa agaaggtgag gtcaattcca aattctggcg gttggtggaa ttgccttaca
     2041 attgccgaca taaacgatga cggcaggccc gacatagtgg gtggaaacct cggtgcaaat
     2101 tcacgcatta aacccgatag ttcacatcct gcaaaaatgt atgtgggcga ttttgcaaac
     2161 aacggcaagt caatatgtat ccccgtctat tataaaacgg atgggaaatc atatccttat
     2221 tttttgaagg acgatataga aaaacaaata ccgcagttga aaaaaaagtt tttgcatttt
     2281 tcagactatg ccggcaaatc gatcgacgaa atttttacga aagatgaatt gaataaagct
     2341 tcgatactga ccgtaacgca gaccgaatcc ctgatttaca tcaatcaggg taattacaat
     2401 ttctctgcag agtacttacc ggtcatgtcg cagttgtcaa ccgtaaatgg cattcttgtt
     2461 actgacttaa atagcgacgg tattaaagat atttttatgg ccggaaactt ttacgggtta
     2521 aagccgcagg gaggccgctt tgatgcaagt tttggcatta cactacttgg tacagcatca
     2581 cataaatttt tttatatgcg accagcggaa agcggtttat ttgtaaatgg ccaggcaagg
     2641 tgtatagata cgattaaaaa tgcaagaggt gaaaatctta ttttggttgg aatgaacaat
     2701 ggtcccttgt acatgtttaa gcggaaaact gattaaaacc gtaaggcgca ttttttgatt
     2761 cacgctgcgg acggaataca tcgacaaatc ccgggaaggt ttttgaaaaa tttcgttttg
     2821 acataaaaaa tgaaaatttt gcacatgaaa aaaaattgga ttttttcctt aatcgccatt
     2881 tgctatgcag gagtcggtca tgcgcaagat ccatggatca ttaaagccga cacgatcgat
     2941 ccttcaaatt actatggtat aacggtcgcc aacggaatga tcggtattgt ttcgtctcct
     3001 gagccattca aggtaaaaga tgttgttctt gcaggtgcat atgatctgta tggtcgtggt
     3061 cgcgtaagca at
//
LOCUS       DASQJI010000228         9011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1711760,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000228 DASQJI010000000
VERSION     DASQJI010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9011
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711760"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1546
                     /locus_tag="VEV83_06635"
     CDS             <1..1546
                     /locus_tag="VEV83_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44823.1"
                     /translation="QYYYAAIFKAGGLFALQETELSEEAKKLIKRFANVFDLTYTRFL
                     DLQKAEANAREAMKRAALDRIRADIASMRTVNDLNKITPLIWNELTILGLSFIRCGVF
                     IMDREEQLIHTFLSTPDGKAIAAFNLPFDTPGNFRVMLDHWRNKKIYIDQWNRDDFND
                     IAEILVNQGAIGTKEQYITSIPAEGFYLNFLPFLQGMLYVGNTEKLNEEQIDLIRQVA
                     EAFSTAYARYEDFNKLELAKQQIETTYSELKSAQAQLIQAEKMASLGELTAGIAHEIQ
                     NPLNFVNNFSEVNGELVDELKAQLATGNLQLASEIADDLKENETKILHHGKRADAIVK
                     GMLQHSRTSTSQKELADINALCDEYLRLSYHGMRGKDKNFNAEIRTDFDASVGKINVV
                     PQDIGRVLLNLYNNAFYAVSEKSKNPEGFENPRGLHPYVPTVTLVTKKLDGKILIAVK
                     DNGAGIPQNIIDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGGEIKVETKEGNESEF
                     IIELPY"
     gene            1558..3585
                     /locus_tag="VEV83_06640"
     CDS             1558..3585
                     /locus_tag="VEV83_06640"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44824.1"
                     /translation="MRTCLMLFFCVLMVRTFPQEKSIDSLKQIVNQQQNDKAEVNALA
                     TLGITVSNFTAAIQYVKEGLLLSKKINYEKGEADCNLVLADLFSDHAQSIYYAFNALV
                     IYEKLKDNTGMASAHLVLQGNYRGAEDFANALVHEFAGEKIAEQNNVIGVFDFPHHRL
                     APLFLAETAQTYILKNEPDSAIIYAQESIQQNELFDGTPWEFPIYLLATIQQIKGDYV
                     HSLENYRLALQLSKIQTEDAHDSLQIYSGMSTLFKSTMQLDSSIYYAQLVNKSWRREI
                     SEVKNLLEAVNNLYEVYKLKGIPDSTLKYLELNYHLRTSFFNTEKQKQIQDATFSAQL
                     KQQEIIAAQANYKNRLQALIFTLGILALAIISALLIRNNRHNQKAKIRIENAYSELKS
                     TQAQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNGELVDELKAQLVTGNLQLA
                     AEIADDLKDNETKILHHGKRADAIVRGMLQHSRVSTGQKEPTDINALCDEYLRLSYHG
                     MRARDKNFNAEIKTDFDETVGKINVVPQDVGRVLLNLFNNAFYAVSEKSKNTGGFRQL
                     EARSSQLEANNEHYVPTVILATKKLDGKILISIKDNGPGIPSNIVDKIFQPFFTTKPT
                     GQGTGLGLSLAYDIIKAHGGEIKVETKEGEGLPGEGSAETGTEFMIWLPFS"
     gene            3717..5192
                     /locus_tag="VEV83_06645"
     CDS             3717..5192
                     /locus_tag="VEV83_06645"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44825.1"
                     /translation="MRPLYLLLAFIIALGYSFKSFGQINGDSLKNEILKSVQQDFSNP
                     TNGNLFFDTSKLFSGESPVHLDKMFEELNKEIEKAKSMGDIQKVRGRYYDLSKLDSVR
                     GNYKGAYEHYKLYSLYHDSLQKKETEKKELQAKMQYEFEKQKAIAKAEQEKKDAEQKR
                     IKNLQYFTIAGLAMLVLVIMIIALIQWKNSNQRKKANTLLQLQKEKVESALSELKSAQ
                     AHLIHSEKMASLGELTAGIAHEIQNPLNFVNNFSEVSNELVDEMKTELATGNLQPATH
                     LADDIKGNLQKIIHHGKRADAIVKGMLQHTRITAGQKEPTDINALADEYLRLSYHGMR
                     AKDNSFTAEIKTDFDESVGKINVVPQDIGRALLNLYTNAFYAVREKSKNPRGFENRRR
                     LHPYVPTVTVVTRKITNKIEIKVKDNGPGIPQGIADKIFQPFFTTKPSGEGTGLGLSL
                     AYDIIKAHGGEIKVETKERQGVPGEGSTETGTEFMIGLPFR"
     gene            5328..>9011
                     /locus_tag="VEV83_06650"
     CDS             5328..>9011
                     /locus_tag="VEV83_06650"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK44826.1"
                     /translation="MARYKPLHCGSLIFFYFIVFISCNRNSNEIPFPENELGYAQPVK
                     VPLQFSAEKKLTWDTVKRGGLQPTIKKLDIDQLPFVPYDTTGFKPFKVRPSEVHFDFN
                     SLPSSSLDINKLPSIPLQFKTTRLPPPAVINTSPPVEQKDKPIAIYDFGIANGLPAKF
                     ITSLIRDRNGLMWIGSREGIFRFDGEHIYTFLPGPILPFIAGMAEDNKGRIWYIDAGG
                     IGMIDPQRSLGNFSGRLTAVPENITKIFKDDKGLLWLYNFSDKAVSVIDPETLTFKNI
                     TVKQGLSDSSFFQAEQDNEKNIWLTSYNNGINILDLKSAKIKYLKAAEGLDNNSSSAI
                     TKDGSGQMWVATKGGVDAIDSKQGNIIHYNDPPGTNNYTLDLAVDNKGKIWKGTVLGL
                     ELLDIRNKTRRVINKDNGMSENIVLSCVQDNYNRMWFATVGGINVVDQNGETVRPVGN
                     NNIISILEDSARNLWVATQKGIIIVNPERDGARTLDRAHGLSNDFVQSFYKFDDKVVV
                     TTNGGINIIDPAKKTIEIINKSNGLANDTIYSSFKDRAGSLWFTGPNNGVDLIDSTKK
                     FIIHTSVRGGLSDDGIADVKEDKEGLIWIATNKGGVDVIDMNKATIKYLDQEPGLKDT
                     CNRLLLPDKNGRMWIGTDKGIYVADKKANTLTAITTKEGLSNDFILSLLEYHGDILAG
                     TSNKVTIITPPGANDTSNGSAKWKISVLDRSQAFVKQGVSWAADAVTRSGQYLLGDNT
                     VTVINDIKRANDSFATYITGIYIMTTPQHFVNTKSSGGIDSSFNATTSANAGFSDQKK
                     FSWDSVEGAYNLPVNLTIPYKQNYVQFKFVQANLGRQDTTWYSYVLEGIDRKWSAPTT
                     NTYTENYLNLPPGDYTFKVCSKRISGAWSSPASFSFVIAPPWYKTWWAYTIFALICIG
                     ILRAYIVYRSRKLTKENKVLEEKINLRTAQLQKSLEELQTTQTQLVQSEKMASLGELT
                     AGIAHEIQNPLNFVNNFADINNELIEELRSKRAMSNSESGKLSNDDEQDALLNDIFQN
                     NEKIASHGRRADAIVKNMLQHSRISSGQKEPTNINALADEYLRLAYHGMRAKDKSFNA
                     TLKTDFDDTIGNINIVSQDIGRVLLNLYNNAFYAVSKASDLAKGASSKSAIADPTSPK
                     LAAQSSKLEATNAPYAPTVTVVTKKLNHKIEIRVRDNGPGIPQNIVDKIFQPFFTTKP
                     TGEGTGLGLSLSYDIIKAHGGEIK"
BASE COUNT         3017 a         1800 c         1970 g         2224 t
ORIGIN      
        1 acaatattac tacgctgcga tatttaaggc cggtggactg tttgctttgc aggaaacaga
       61 actgtctgaa gaggcgaaga agttgataaa gcgtttcgcc aatgtgttcg atcttactta
      121 cacgcgtttc cttgatctcc aaaaagcaga agccaatgca agggaagcaa tgaagcgggc
      181 cgcgctcgac cggatcaggg ccgatatcgc ttcgatgaga actgtaaatg atctaaacaa
      241 gataacaccg ctaatctgga acgaactaac aatacttggt ctatcattta tacggtgcgg
      301 tgtttttatt atggatcgcg aagaacaact cattcatacc tttctttcaa cacccgatgg
      361 aaaagctatt gccgcattta atttaccatt tgatacaccg ggaaatttta gagtgatgct
      421 ggaccactgg cgtaataaga aaatttacat tgaccagtgg aaccgggacg attttaatga
      481 tatagcagaa atattggtga accagggtgc gatcgggaca aaagaacaat acataacctc
      541 gattccggca gaaggatttt atctaaactt tcttccattt ctgcaaggaa tgttgtatgt
      601 aggcaacaca gaaaaattaa acgaagagca aatagatttg attcgacagg ttgccgaggc
      661 gttctctacg gcttatgccc ggtacgaaga cttcaacaaa cttgaattgg ctaaacaaca
      721 aattgaaaca acttattcag aattaaaatc agcgcaggca caacttattc aggcagagaa
      781 gatggcttcg cttggcgagc tcactgcagg catcgctcac gagatacaaa acccgttgaa
      841 ttttgtcaat aatttctcgg aagtgaacgg agagttagtt gatgaattga aagcacaact
      901 ggcaaccggc aacctgcaac tcgccagcga aatcgcagat gatctaaaag aaaatgaaac
      961 taaaattctt catcacggca aacgggcaga tgccattgta aaaggcatgc tccagcattc
     1021 acgtacgagc acaagccaaa aagaactggc agacatcaat gctttatgtg atgaatattt
     1081 acgtctctcc tatcatggca tgagaggcaa ggataaaaat ttcaacgcag aaataagaac
     1141 cgattttgac gcgagcgtcg gtaaaataaa tgtcgttccg caggatatcg gacgtgtgtt
     1201 gctgaatctg tataataatg ccttttacgc cgtgagtgag aagagtaaaa accccgaggg
     1261 ttttgaaaac cctcggggtt tgcatcccta cgtccccacc gtgactcttg tcacaaaaaa
     1321 gcttgatggt aaaattctaa ttgctgtaaa agacaacggc gccggcattc ctcaaaacat
     1381 catcgataaa attttccagc cattctttac cacaaaacca acaggtgaag gaacaggact
     1441 aggtctgagt ttgagctatg atatcattaa agcgcatggc ggcgaaataa aagtagagac
     1501 gaaagaaggt aacgaaagtg agtttataat agagcttccc tattaacttt agagaatatg
     1561 agaacatgtt taatgctttt tttttgtgtt ctaatggtgc gaacttttcc acaagaaaag
     1621 agtattgaca gtttaaagca aatagttaat caacaacaaa acgacaaagc ggaggtaaac
     1681 gcactggcaa ccctcggcat aactgtttcc aattttacag ctgcaataca gtacgtcaaa
     1741 gaaggacttc ttctttcaaa gaaaattaat tatgaaaaag gggaagctga ttgcaatttg
     1801 gttcttgcag acctgttctc tgatcatgct caaagtattt attatgcatt caacgcttta
     1861 gtaatttatg aaaagctgaa agataataca ggtatggcat ctgcgcattt ggttttgcag
     1921 ggaaattacc gcggggcgga agattttgca aacgcattgg tacatgagtt cgcaggtgaa
     1981 aaaatagctg aacagaataa tgtcatagga gtgtttgatt ttccccacca tcggctcgcc
     2041 cctttgtttc tggcggaaac tgcccaaaca tatattttaa agaacgaacc ggattctgcg
     2101 attatctatg cgcaggaatc aatccagcaa aatgaattat ttgatggtac gccgtgggag
     2161 tttcccattt atcttttggc cacgatacag caaataaaag gagattatgt tcactccctc
     2221 gaaaactaca ggttagcatt gcaactttcc aaaatccaaa ctgaagatgc tcacgattct
     2281 ctacagatct acagcggaat gtccacctta ttcaaaagca cgatgcagtt ggattcgtcc
     2341 atttattatg cccaactggt aaacaaatcc tggcgccgtg aaatatctga agtaaaaaat
     2401 ctactggaag ctgtaaataa cctgtatgaa gtttataaac taaagggaat accagatagc
     2461 acccttaaat accttgaatt aaattaccat ttacgcacaa gtttttttaa tacagaaaaa
     2521 caaaaacaaa tacaggatgc cacattcagc gcccagttaa aacaacagga gattattgcg
     2581 gcacaggcaa attataaaaa caggttgcag gctttaatat ttacattagg gatattggca
     2641 ctggctataa tatcagcatt gttaattcga aacaaccggc ataaccaaaa agccaaaata
     2701 agaattgaaa acgcctactc agaacttaaa tccacccagg ctcaacttat tcaatccgaa
     2761 aaaatggctt cgcttggaga acttaccgcc ggcatcgccc acgagataca aaacccgttg
     2821 aatttcgtga ataatttttc tgaagtgaac ggtgaattgg ttgatgaatt gaaagcacag
     2881 ttggtaaccg gcaacctgca actcgccgcc gaaattgcag atgatctaaa agacaatgaa
     2941 actaaaattc ttcatcacgg caagcgtgca gatgcaattg tgagaggaat gcttcaacat
     3001 tcgcgcgtca gcacggggca aaaagaacca actgatatca atgctttgtg tgatgaatat
     3061 ctacgtctct cctatcatgg catgcgtgca agagacaaaa atttcaatgc agaaataaaa
     3121 acagattttg atgaaaccgt cggcaaaata aatgttgtac cgcaagatgt tggcagggtg
     3181 ttgctgaatt tatttaataa tgctttctac gcagtgagcg aaaaatcaaa aaacaccgga
     3241 ggtttcagac agctcgaagc tcgaagctca cagctcgaag ctaataacga acactacgtc
     3301 cccaccgtca ttcttgccac aaaaaagctt gatggtaaaa tcctaatttc tataaaagac
     3361 aacggccccg ggattccttc gaacatcgtt gacaaaatct ttcagccatt cttcaccacg
     3421 aagccaacgg ggcaaggaac aggattaggt ttaagtttgg catatgatat aattaaagcg
     3481 catggcggtg aaataaaagt agagaccaaa gaaggtgaag gcttgcccgg cgaaggttcg
     3541 gcggagacgg gaacggagtt tatgatttgg ttgccgttct cgtgaagttt attcaactaa
     3601 tcagtttagg tcaggaaaat cttagaaatc gaggctcaga gaaagaagca gttggtggca
     3661 aataaaaagt cgagaaaaat gaaaagaact gaattcatcg ttcaatcacc aaataaatga
     3721 gaccgttata tcttttactg gctttcatca ttgcacttgg ttattctttc aaaagctttg
     3781 gccagatcaa tggagattcg cttaaaaatg aaattctcaa atcggtccag caggacttta
     3841 gcaacccaac aaacggtaat ttgttttttg atacatcaaa actgttttca ggcgagtccc
     3901 ctgttcacct cgataagatg tttgaggaat tgaataagga gatagaaaaa gcgaaatcga
     3961 tgggcgatat tcagaaagtc aggggccggt attatgacct ctccaaactc gacagtgttc
     4021 gtggcaatta caaaggggcc tatgaacatt acaaattata tagtttatat cacgacagct
     4081 tacaaaaaaa agaaacagag aaaaaagaac tgcaggctaa gatgcaatac gagtttgaga
     4141 agcaaaaagc gatcgcaaaa gcagaacagg aaaagaaaga tgctgaacag aaaagaatta
     4201 agaatcttca atactttacc atcgccggtt tagcgatgct cgtactggtt ataatgataa
     4261 tcgcgttgat acaatggaaa aatagtaatc aacggaagaa ggcaaataca ttgctgcaac
     4321 tgcaaaaaga aaaagttgag tctgcattgt cggaactcaa atctgcacaa gcccacctga
     4381 tccattcgga aaaaatggct tcgcttggtg aacttactgc cggcatcgca cacgagatcc
     4441 aaaacccatt gaactttgta aataattttt cggaagtgag taatgagctg gttgatgaaa
     4501 tgaaaaccga actcgcaacc ggcaacctgc agcctgcaac tcatctcgca gatgatataa
     4561 agggaaatct tcaaaaaata attcatcatg gcaaacgcgc cgatgccatc gtaaaaggaa
     4621 tgcttcagca cacacgcatt accgccggcc aaaaagaacc aacggatatc aatgcattgg
     4681 cagatgaata tctgcgattg agttatcacg gcatgcgcgc aaaggataac agcttcactg
     4741 cagaaataaa aacagatttt gatgaaagtg ttggaaagat aaatgtcgtg ccgcaggata
     4801 ttggaagagc gctgctgaac ttgtacacca atgcgtttta tgcagtaagg gaaaaatcaa
     4861 aaaacccccg gggttttgaa aaccgtcggc gcttgcatcc ttacgtccct accgtcactg
     4921 ttgtcacaag aaaaatcacc aacaagatcg aaataaaagt aaaagacaac ggcccgggca
     4981 ttccccaggg catcgctgat aaaatatttc aaccgttctt caccacgaag ccatcgggcg
     5041 aaggaacggg attgggattg agtttagctt atgatattat taaagcgcat ggtggtgaaa
     5101 taaaggtaga gaccaaagaa cgtcaaggcg tgcccggcga aggttcaacg gagaccggaa
     5161 cggagtttat gattgggttg ccattccgct gagttactta accgatcagt ttaaccagga
     5221 aaatcttata aatcatggtt tagacaacat aaaaatcgcc tggagcgcta agacaacaat
     5281 tacttcgtaa tttctcgcct ttattaagac caattaatgc aaccattatg gcaaggtata
     5341 aacctctgca ctgcggatcg ctgatatttt tttattttat cgtttttata tcctgtaaca
     5401 gaaattcaaa tgaaattccg ttcccggaaa atgaattggg ttacgcgcag cctgtcaaag
     5461 ttccactgca attttctgcg gaaaaaaaat taacatggga tacggttaag cgtggaggcc
     5521 ttcaaccgac aataaagaaa ttggatatcg accagttgcc ttttgtgcct tatgatacta
     5581 caggttttaa accttttaag gtgcggccat ccgaggtgca ttttgatttc aatagtttac
     5641 caagttccag cctggatata aataagcttc cgtcaatacc gttgcaattc aaaactacac
     5701 gattgccacc gccggcagtg atcaacactt caccgcctgt tgaacaaaag gacaagccca
     5761 tagctattta tgatttcggt atagcaaatg gcctgcctgc aaaatttata accagcttaa
     5821 taagagatag aaacgggttg atgtggatcg gcagccggga aggaattttc cggtttgatg
     5881 gggaacacat atatactttc ttaccaggcc cgattctacc gttcattgcg ggcatggctg
     5941 aagataacaa gggcagaata tggtatattg acgcaggggg gattggcatg atcgatccgc
     6001 aacgaagtct tggaaatttt tccggcaggc tgactgcagt accggaaaat ataaccaaga
     6061 tatttaaaga cgataaaggg ttgctttggt tgtacaattt tagcgataaa gctgtgagtg
     6121 ttatagaccc ggaaacgctc acttttaaaa acataacagt gaaacagggc ctgtctgatt
     6181 catcgttttt tcaagcagaa caggataatg aaaagaacat ctggcttacg agttacaaca
     6241 atggaataaa tattctcgat cttaaatcag ccaaaattaa atatttgaaa gcggccgaag
     6301 gattggataa caattcatcg tcggcgataa cgaaagatgg ttcaggacaa atgtgggttg
     6361 ctacaaaagg cggcgtagat gcaatagact caaaacaggg aaacataatt cattacaatg
     6421 atccgcccgg aacgaataat tacacactcg acctggcagt tgataataag gggaaaatct
     6481 ggaaaggcac tgtcttaggg ctggagttac tggatattcg aaataaaaca cggcgtgtaa
     6541 ttaataagga taacggcatg agcgaaaata ttgtcctttc atgcgtacag gataactata
     6601 accggatgtg gttcgcaact gtaggaggaa taaatgttgt ggatcaaaac ggtgaaacag
     6661 ttcgcccggt cggtaacaac aatatcatta gcattcttga agactcggcg cggaacctgt
     6721 gggtggccac gcaaaaagga ataatcatag tgaatcccga aagagatggt gcaagaacgc
     6781 tggatagagc acacggtctg agtaatgatt ttgtacaatc attttacaaa ttcgatgata
     6841 aagtggtggt aacaacgaat ggcgggatca acataattga ccctgcaaaa aaaacgattg
     6901 agataataaa caaaagcaat ggccttgcaa acgacaccat ttactcatcc tttaaagaca
     6961 gggccggcag tctttggttt accgggccca ataacggtgt ggacctgatt gactctacaa
     7021 aaaaatttat tatccacacc agcgtccgcg gcgggttaag cgacgatgga attgcagatg
     7081 taaaagagga taaggaagga ttgatttgga tagcgaccaa caagggtggt gttgatgtaa
     7141 ttgacatgaa taaagcaact attaaatacc tggatcaaga gccgggtttg aaagacacat
     7201 gcaatcgttt attgttgccg gataaaaacg gcaggatgtg gatcgggacc gataaaggga
     7261 tatatgttgc agataagaaa gcaaatacac ttactgcaat aacaacaaaa gaaggactat
     7321 ccaatgattt tatactgtcg ctattggagt atcatggaga tattttggcg ggaacgagta
     7381 ataaagtaac gatcatcacg ccaccaggag ctaacgacac ttcaaacggc tccgccaaat
     7441 ggaaaataag tgtgcttgac aggtcgcagg cattcgtaaa acaaggtgta tcgtgggccg
     7501 cagatgcagt aacaaggtcg gggcagtatt tattaggaga taacaccgta acggttatca
     7561 atgacatcaa acgtgcaaac gattcctttg caacttacat taccggcatc tatataatga
     7621 ccactcctca gcattttgtt aatacaaaat catccggtgg aattgacagt tcgttcaacg
     7681 cgaccacttc tgctaatgca gggttctccg atcagaaaaa gtttagttgg gatagcgtgg
     7741 aaggagcata caatttgccc gtaaacctga ctattcctta caaacagaat tatgttcaat
     7801 tcaaatttgt gcaggctaat ttaggcaggc aggatacaac ctggtatagt tacgtattag
     7861 aaggcattga cagaaaatgg agcgctccaa ctaccaatac atacactgaa aactatttga
     7921 accttccgcc tggtgattat actttcaaag tatgtagtaa aaggatcagt ggagcatggt
     7981 cgagccctgc gtcttttagc tttgtaattg ctccgccgtg gtataaaacg tggtgggcat
     8041 atacaatatt tgctttgata tgcatcggta tccttcgtgc atatattgtt tatcgctcac
     8101 gcaaactcac taaggaaaat aaagtattgg aagaaaaaat aaatctgaga acagcgcaat
     8161 tacaaaaatc gctcgaggag ctccagacaa ctcaaaccca acttgtccaa tccgaaaaaa
     8221 tggcctcgct cggcgaactc acggcgggca ttgcacatga gatacaaaac cccttgaact
     8281 tcgtgaacaa ttttgccgat atcaacaatg agctgatcga agaacttaga agtaagcgag
     8341 cgatgtcgaa cagcgaatcc ggtaaattga gcaacgatga tgaacaggat gcgctgctca
     8401 atgatatttt tcagaacaac gaaaagatag cgtctcatgg caggcgtgcg gacgcaatcg
     8461 tgaagaatat gctccagcac tcgcgcatca gttcggggca aaaggaaccg accaatatta
     8521 atgcactggc agatgaatat ctgcgccttg cttatcacgg catgcgtgcg aaggataagt
     8581 cttttaatgc aacgctgaaa actgatttcg atgacacgat cggtaacatc aatattgttt
     8641 cgcaggatat tggaagagtc ttgttgaatt tatacaacaa tgcattttat gccgtgtcaa
     8701 aagcttcgga cctagctaaa ggtgcgtcaa gtaaatcagc gatagctgac ccaacaagcc
     8761 caaagctcgc agctcagagc tcaaagctcg aagctaccaa cgcgccttac gcccctacgg
     8821 tcaccgttgt cacaaaaaag ctgaatcata aaattgaaat cagagttaga gataacggcc
     8881 ccggcattcc ccaaaacatc gttgataaaa ttttccaacc cttcttcacc accaagccaa
     8941 caggcgaagg aacagggctg ggtttgagtt tgagttacga catcataaaa gcgcatggcg
     9001 gtgagataaa a
//
LOCUS       DASQJI010000229         5333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1558436,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000229 DASQJI010000000
VERSION     DASQJI010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5333
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558436"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..1711
                     /gene="pgi"
                     /locus_tag="VEV83_06655"
     CDS             53..1711
                     /gene="pgi"
                     /locus_tag="VEV83_06655"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HYK44827.1"
                     /translation="MLPRINPTNTQAWLLLKKHQSEEMRNVSMKRLFANDPDRFSKFS
                     LTTNDILFDYSKNIMTPKTLQLLLQLAGDCEVKTAIQAMFKGDKINETENRSVLHTAL
                     RNFSGDPVYSDGKDVMPDVQRVQQHMNDFCKKIHSGEWKGYSGKNIKYIVNIGIGGSD
                     LGPVMVTEALRPYWKENIQAYFVSNVDGTHIAETLKKITPDETLFLIASKTFTTQETM
                     TNAHTAREWFLQHAPGEQEIAKHFVALSTNEKEVKKFGIDPANMFEFWDWVGGRYSLW
                     SAIGLSIALTIGYENFEQLLKGAYETDVHFQTAPFDKNIPVLMALIGIWYTNFFKAQT
                     EAILPYDQYMHRFAAYFQQGNMESNGKYVDRNGSETNYQTGPVIWGEPGTNGQHAFYQ
                     LIHQGTILIPCDFIAPAISHNPIGDHHVKLLSNFFAQTEALMKGKTEAEVTEELKKDG
                     KSPEEIKKLVPFKVFKGNKPTNSFLVKEITPKTLGNLIALYEHKIFVQGVIWNIFSFD
                     QWGVELGKQLAGKILPELESGDTITSHDSSTNGLINAWKKMRQI"
     gene            complement(1810..2364)
                     /locus_tag="VEV83_06660"
     CDS             complement(1810..2364)
                     /locus_tag="VEV83_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HYK44828.1"
                     /translation="MDAPIKTYCDYVSKLEKHNVHKRYHDTEYGFPLQSDNELFARLV
                     LEINQAGLSWNTILNKKENFFDAYDNFEVAKVAKYTGKKIEKLMNDPGIIRNRLKINA
                     AVENAKKIKELQNEFGSFKAWLEHHHALTKEEWVKLFKQNFRFTGGEIVNEFLMSTGY
                     LPGAHSENCPVYKKILKLKPMWLK"
     gene            complement(2448..4685)
                     /locus_tag="VEV83_06665"
     CDS             complement(2448..4685)
                     /locus_tag="VEV83_06665"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HYK44829.1"
                     /translation="MKIVTAIALLLGLFILFYCCVESTKPEVATPPTYVGSEKCQSCH
                     GKEYNSYLTSDHFHAMDSALPRSVKGDFNNSFFVYYGDTSFFYKKGDQYYVRTTDSTH
                     KKKEFLISFTFGWRPLQQYLVSFPDGRIQALPFCWDTRPKEQGGQRWFHIYGKEKIPP
                     GDELFWTGVNQNWNYMCADCHTTDYFKNFDVSNNTFHSSWSEDRVSCESCHGPASKHL
                     EWTEKKYANDSLKGFVINLAGEKVNWKLNPEKGIAYPDKIVHNDILIGTCARCHARAS
                     RLTDYYFHGQPFLQTHIPSTINTESYYVDGQIKQEDYEYGSFLQSKMYAIGVTCINCH
                     EPHTMQLKASGNQVCYSCHAPEKFDVPEHTHHQVNSTGAQCVNCHMPVTNYMVIDARR
                     DHSIRIPRPDLSAQMNTPNACNKCHTDKSVDWAAKYFLDWYKDKLPPAHTTYAELMYA
                     VSKNTSESEPALNDLLASKNYPAIIQATALERYTFYTPRIVEQIKNYLQSPDPNLRLN
                     AVHSAANLPQETLLSIVTPLLDDAVISVRTEAMNAIAPFYSQLDPDKKQRFDAVMNEY
                     LTIQRNLGDRPESYLNQGIVLAATGKTADAEQAYLFGLKRFPSFVAYYGNLADVYRAE
                     NNEEKAKEYLDKGLSIQPGNAELHYAAALWYERKKDRVSGLREFKKAVDLNPADGSFT
                     YAYALALQSEHQLQPAIAILENYTSKQGNDPLVLNGLISMYQESKQPAKVSYYTDLRK
                     SVYGY"
     gene            5109..>5333
                     /locus_tag="VEV83_06670"
     CDS             5109..>5333
                     /locus_tag="VEV83_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HYK44830.1"
                     /translation="MCSVAASAQDLEPRAYANVPKGTNVVAAVYAFSHGDVIADPSLP
                     VADFKISAHSFGFGYVRTFALANKLARVQVT"
BASE COUNT         1504 a         1149 c         1180 g         1500 t
ORIGIN      
        1 atcgcaaata attcattttt tattaaatca ccatcctcat ttttaatcat agatgttacc
       61 aagaataaat cccacaaata cacaggcctg gctcctttta aaaaaacatc agagcgaaga
      121 gatgcgcaac gtatcgatga agcgattatt cgcgaacgat cccgacagat tttcaaaatt
      181 ctcgctcacg acgaatgata ttcttttcga ctattcaaaa aatatcatga cgccgaaaac
      241 attgcaactg ctgttgcagc ttgccgggga ttgcgaggtg aaaacagcga tacaggcaat
      301 gtttaaaggc gacaaaataa atgagaccga aaaccgctca gtgctgcata cagcattgag
      361 gaactttagt ggcgacccgg tgtacagcga tggaaaagat gtaatgcccg atgtacagcg
      421 ggtacaacag cacatgaatg acttctgcaa aaaaattcat agcggcgaat ggaaaggtta
      481 ttccggcaag aatataaagt acatcgtaaa catcggcatc ggcggaagtg accttggacc
      541 ggtgatggtg accgaagcat tgcgtcctta ttggaaagag aatattcagg catattttgt
      601 aagtaatgtt gatggaacac atatcgcgga aacattaaaa aagatcacgc cggatgagac
      661 gttgtttttg atcgcgtcta aaactttcac tacgcaggaa actatgacca atgcgcatac
      721 agcgcgtgag tggtttctgc aacatgcgcc gggtgagcag gagatcgcga aacattttgt
      781 ggcgttgagt acaaatgaaa aagaggtaaa gaaatttggc atcgatcctg ccaacatgtt
      841 tgagttttgg gattgggttg gtggcaggta ttcactatgg agcgctattg gtttgtcgat
      901 cgcactgacc atcggttacg aaaatttcga acagttgtta aaaggcgcct atgaaacgga
      961 tgtacatttt caaacagctc cgtttgataa aaacatcccg gtgttgatgg cgctgatagg
     1021 aatttggtac acaaattttt tcaaggcgca gacggaagca attctgcctt acgatcagta
     1081 tatgcatcgg tttgccgcgt attttcagca gggcaatatg gaaagtaatg gaaagtatgt
     1141 tgaccgcaac gggagcgaaa cgaattatca gaccgggccc gtgatctggg gcgagccggg
     1201 cactaacggt caacacgcgt tttaccagct catccaccag ggaacgatat taattccctg
     1261 cgactttatt gcgcccgcga tcagccacaa tccgatcggt gatcaccacg taaagttgct
     1321 gagcaatttt tttgcgcaaa cggaagcact gatgaaagga aaaactgaag ccgaggtgac
     1381 tgaagaatta aaaaaagatg gcaagtcgcc ggaagaaata aaaaaattag tgccgtttaa
     1441 agtgtttaaa ggaaacaaac caacgaattc atttttagta aaagagatca ctcccaaaac
     1501 ccttggcaac cttattgcat tgtacgaaca taaaatattt gtgcaaggtg ttatctggaa
     1561 tattttcagc tttgatcaat ggggagttga attgggcaag cagcttgcgg gaaagatcct
     1621 gcctgaatta gagtccgggg acacgatcac atcgcacgat tcttctacga atggattgat
     1681 caatgcgtgg aagaagatga ggcagattta aaacggagaa cgctttcagt cggtcgcata
     1741 gccaatgcgg caaagtcatc cgttttttaa cacaggaaaa aaatagggcg atacctatgg
     1801 ccctgttatt tatttcagcc acataggttt cagctttaaa atttttttgt agaccgggca
     1861 gttctcagaa tgtgcgccag gcaaatatcc ggtactcatc aaaaattcat ttacaatttc
     1921 accgcccgta aatcgaaaat tttgtttaaa caacttcacc cattcttctt ttgttaatgc
     1981 gtgatgatgt tcgagccacg ctttaaacga cccaaattca ttttgcagct cttttatctt
     2041 tttcgcgttt tcaacggcgg cgtttatttt taagcggttc cggatgatgc ccggatcatt
     2101 catcagcttt tcaatcttct tcccggtgta cttggccact ttggctactt cgaaattgtc
     2161 gtaagcgtca aaaaagtttt ctttcttgtt taaaatagta ttccagctta gacccgcctg
     2221 gtttatttcg agcaccagcc ttgcaaataa ttcattgtcg ctttgaagcg gaaagccata
     2281 ctcagtgtcg tggtatcgtt tatgtacatt atgcttttcg agctttgaaa catagtcgca
     2341 gtaagttttt attggagcgt ccatataaaa atctataagg gcaaaagata aacaatttgg
     2401 ctcagccttt catgagtgtg acctaagaga cgcgagcccc tctgctctta ataaccatac
     2461 acgctcttcc ttaaatctgt atagtaactc actttggctg gttgctttga ttcctggtac
     2521 atcgagatca ggccgttcag aacaagcgga tcattgcctt gttttgatgt gtaattttcc
     2581 agtattgcga tcgccggttg cagttggtgt tctgactgaa gcgcaagtgc ataagcgtag
     2641 gtgaaagaac catcggccgg attaaggtcc accgcctttt tgaactctct caaaccggat
     2701 acgcgatctt tctttcgttc ataccataac gcggcggcat aatgcaactc agcattgcca
     2761 ggttgaattg ataagccctt atcaagatat tcttttgctt tttcttcgtt attttccgca
     2821 cggtatacat cagcaagatt accgtaatac gcaacgaacg acggaaaccg tttcagtcca
     2881 aagaggtacg cctgttcggc atcagccgtt tttccggttg ctgcaagcac gatgccctgg
     2941 ttcaaataag attcaggccg gtctccgagg ttccgctgga tcgtgagata ttcattcatg
     3001 acagcatcga agcgttgctt tttatccgga tccagttgtg aatagaacgg cgcgatcgca
     3061 ttcattgcct cagtgcgaac ggagataaca gcatcatcca gcagcggagt aacgatgctt
     3121 aataacgtct cctgcggcaa atttgctgca ctgtgaaccg cattcaaacg aagatttgga
     3181 tccgggcttt gcagataatt ttttatctgt tcaacaatcc tcggcgtgta aaatgtataa
     3241 cgttcaagtg cggttgcctg gattatcgcg ggataatttt tcgaggccag cagatcattc
     3301 agcgcaggtt cgctttcaga tgtgtttttt gataccgcat acatcaattc cgcatatgtt
     3361 gtatgtgccg gcggaagttt gtccttatac cagtcaagga aatattttgc agcccagtct
     3421 acagacttat cagtatgaca tttgttgcag gcattcggtg tattcatttg cgccgaaagg
     3481 tcaggccgcg gaatgcgtat gctatgatct ctcctcgcat cgatcaccat gtaattcgtt
     3541 acaggcatat gacaattgac gcattgcgca ccagtgctgt taacctggtg atgggtgtgc
     3601 tcagggacgt caaacttttc gggcgcatgg cacgaatagc aaacctggtt accactggct
     3661 ttcaattgca tcgtatgcgg ctcatggcaa ttgatacatg ttacgccaat tgcatacatc
     3721 ttactttgca aaaaggagcc atactcataa tcttcttgct ttatctgccc gtcgacataa
     3781 taactttcag tgtttatagt ggacggaatg tgcgtttgca agaatggttg cccatgaaaa
     3841 taataatcgg taagacgtga tgcccgtgca tggcatcgcg cacaggtgcc gatcaaaata
     3901 tcgttgtgaa ctattttgtc cgggtaagca attccttttt cagggttcaa cttccagttc
     3961 actttctccc ccgccaggtt gataacaaaa cctttcaaac tatcattcgc atattttttt
     4021 tctgtccatt caagatgttt cgacgcgggt ccgtgacagg attcgcaaga cactctgtct
     4081 tcgctccatg aactgtgaaa cgtattattt gatacatcaa aatttttgaa ataatcggtg
     4141 gtgtggcaat cggcgcacat atagttccag ttttggttca cgccagtcca gaataattca
     4201 tcacccggcg gaattttttc tttgccataa atgtgaaacc atcgctgtcc tccctgttct
     4261 ttaggcctcg tatcccaaca aaaaggtaaa gcctggatgc ggccatccgg aaaactcacg
     4321 agatactgtt gcaagggacg ccatccgaac gtaaagctta tcaggaattc ttttttcttg
     4381 tgagttgaat ctgttgtgcg cacgtagtat tgatcgcctt tcttataaaa aaaactggta
     4441 tcaccgtagt aaacaaaaaa actgttatta aagtcaccct ttaccgaccg gggtaacgcg
     4501 ctgtccatcg catgaaaatg gtccgaggta agatagctgt tgtattcttt cccatgacag
     4561 ctttgacatt tttcgctgcc aacgtaggtc ggcggagttg cgacttccgg ttttgttgat
     4621 tcgacgcaac agtagaacaa aatgaataaa ccaagaagca gagctatcgc cgtaactatt
     4681 ttcatcacgc taatttatat ccgcagtctt aaacaaaaaa gacaaagcac gtggcttccc
     4741 ggtaattgaa ctgagatagg gccatttaaa aacaaaaaca tgccaacgcg acgcgctctt
     4801 atgtaatctt ccataccgaa gaaagatgtt taaatcgaaa gaccgaacat caccgaacac
     4861 cgttacatcg gcgacatgaa ttttgtagtc gaaggtaata tcatgataaa actaatttga
     4921 tcagaaacta aaatagaagt aacaccaggc gaacgatcga cttccagttt gagttaacag
     4981 ttaaacatgt tttcaatatt tattgtagat ttcgcttttg tagcttcatc gtattcgtaa
     5041 cattgctgac ttcaagtcta ttttaccggg taaggaagat gagaaaattc ttcgcaatac
     5101 tattttgtat gtgctctgtt gcagctagcg cacaggacct cgaaccgcgc gcatatgcga
     5161 acgtgcccaa aggaactaat gtcgtcgccg cggtatatgc attttcgcat ggcgatgtaa
     5221 ttgcagatcc gtcgcttcca gtcgcggatt tcaagataag cgcacacagt tttggcttcg
     5281 ggtatgtacg aacgtttgcc cttgctaata aactcgccag ggtacaggta acg
//
LOCUS       DASQJI010000230         6475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2326267,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000230 DASQJI010000000
VERSION     DASQJI010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6475
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2326267"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VEV83_06675"
     CDS             <1..469
                     /locus_tag="VEV83_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HYK44831.1"
                     /translation="KTIKPLENKGIPLHVKCFFDPSLPGTVISKKMSQRLPPIVIIKE
                     KQALIHLHSQDFSFVAEHLMSELYKILGELKVKPNLIQTGAVSLQLCLDDRSDKIDQF
                     AATASNIFDVQVEKDLCLLTIRHFNNDLLTRMTAAKQVILKQQTPDTVQVLYR"
     gene            695..1243
                     /locus_tag="VEV83_06680"
     CDS             695..1243
                     /locus_tag="VEV83_06680"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSC84-related protein"
                     /protein_id="HYK44832.1"
                     /translation="MKKTSFLLFIQALFLFSALSISSSGLAQSTKDRVIIEDADSARA
                     DFIRTDLLMKSLFDSAYGYVIFPNIGKGAIGVGGAAGNGIVYEKGAMIGKASMKQVTI
                     GFQFGGQAYREVIFFENKETLDRFREDKIEFSAEASAVAATVGAAAHAKYTNGIMIFT
                     QLKGGLMYEASVGGQKFNYTAF"
     gene            complement(1342..1692)
                     /locus_tag="VEV83_06685"
     CDS             complement(1342..1692)
                     /locus_tag="VEV83_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2200 domain-containing protein"
                     /protein_id="HYK44833.1"
                     /translation="MDKTRVYRLVFASVYPLYIKKAEKKGRTKEEVDAIIFWLTGYNK
                     QTLQKQIDKKSDFETFFAEAPALNPNVSKITGLICGYRVEEIEDKVIQKMRYLDKLID
                     ELAKGKSMEKILRK"
     gene            complement(1762..2298)
                     /locus_tag="VEV83_06690"
     CDS             complement(1762..2298)
                     /locus_tag="VEV83_06690"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HYK44834.1"
                     /translation="MKLEKTGRISSEDNRTTNNVTIILFVIYLLAIFWILLLKLGVRF
                     SYMGNRSVNLIAFNHPDRGELISNVVIFIPLGMYAGVLFTRWTFGTKLLLIFLTSSVV
                     ETLQFIFKIGAFDITDIITNMSGGIIGLIIFGAINKGFNDHVKAQRFVNIVAGIGTVL
                     MISLLLLLKMNMLPVRYQ"
     gene            complement(2519..2962)
                     /locus_tag="VEV83_06695"
     CDS             complement(2519..2962)
                     /locus_tag="VEV83_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK44835.1"
                     /translation="MAVINPYIHFNGNAEEAFTFYKSVFGGDFARIIRYKDLSTPEYP
                     IPENDANRIMHIVLPIGKNNVLMASDVLESMGQVTENDNRNTIFISAESKAEADKLFN
                     ALSAGGKVEMPIADGPLGSYFGMFADKYGIEWMVDFTENIKNKTN"
     gene            complement(3207..3707)
                     /locus_tag="VEV83_06700"
     CDS             complement(3207..3707)
                     /locus_tag="VEV83_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HYK44836.1"
                     /translation="MKNDLLFDFTVDKAAKTVYITREFDAPLSLVWDAYTKQELLDQW
                     WAPKPWMSKTKSMKFEVGGRRFYAMVSPEGQERWSIQKYTSITPKTNFKFFNAFADKD
                     ENPELPGSEWDFNFSEQTGTTTVTITIYNESLARLEKMIEMGFKEGYAMQMQNLDELL
                     ATLSQK"
     gene            complement(3704..4024)
                     /locus_tag="VEV83_06705"
     CDS             complement(3704..4024)
                     /locus_tag="VEV83_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYK44837.1"
                     /translation="MRRDIFQAIADPTRRAIIALIALQAMTPNAIAENFKTTRQAVSK
                     HLRILTECELVKQEQQGREIYYSLEIEKMKEIDKWLSQYRKIWEARFNQLDKVLSTIK
                     KQKK"
     gene            complement(4252..5247)
                     /locus_tag="VEV83_06710"
     CDS             complement(4252..5247)
                     /locus_tag="VEV83_06710"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYK44838.1"
                     /translation="MKHCYCIFLLTIATFCNRIALAQNNSRSPQLTIGDNAPELRIGQ
                     WLKDGGFKPFEKGKVYLIDLWATWCVPCIVGMPHLSELQKKYKANGLEVIGITSEDKY
                     GNTLESVKNFILKKDSLMNYNVAWVAPSMKDTEEGIWLHPWMQQSGFGNLPTSFLIDR
                     NGKIVYMGDPSTIDKTLDDVMEGNYDVTRLREEYISGIDAEKTLLKFNHALKTKVFDS
                     AINYGLQLLTNFLYVRPNTYLVMGWQVAHIQGEVDSQLLQIGYNAIIRGIQQTNFNSP
                     AFYDVLAAIYAARKDYPLAIIIEKLAVALSEGEMKKNQTKNLEKYLALEMEKQKR"
     gene            complement(5526..5951)
                     /locus_tag="VEV83_06715"
     CDS             complement(5526..5951)
                     /locus_tag="VEV83_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HYK44839.1"
                     /translation="MEVQEEIKNYISSQPEAKRRDMEALHRIILEVMPGCKLWFLDGK
                     DGENKTVSNPNIGYGVHTIKYADGKTREFYEIGISANKTGISVYILGIKDKKYLAETY
                     GQRLGKASVSGYCIKFKSLKDINIDILAAAIGYGFATSL"
BASE COUNT         1772 a         1290 c         1257 g         2156 t
ORIGIN      
        1 taaaacgatc aagccgctgg agaacaaggg aattccgctg cacgtgaaat gctttttcga
       61 tccatcgttg ccgggaacag tgatatcaaa gaaaatgtcg caacgtttgc cgccgattgt
      121 tatcatcaag gaaaaacaag cccttattca tttacacagc caggattttt catttgtggc
      181 tgaacacctg atgagcgaat tgtataaaat cctcggcgaa ttaaaagtca aaccgaacct
      241 tattcaaacc ggcgctgtta gcttgcagtt gtgcctggat gatcgaagcg acaagattga
      301 ccaattcgcc gccaccgcaa gcaacatttt tgatgtgcag gtggaaaaag atctttgcct
      361 gttgacgatc cgccatttta ataatgacct gctcaccagg atgacggcgg caaaacaagt
      421 tatcctgaag cagcaaacac ctgacacggt gcaggtgttg tatagataat gtttgaggtt
      481 tgaagtttga ggtttgaggt aggttcatta gttaattggt tgattcgttt atgggttaac
      541 tgtaagaagt ttggcgaata atgtgatgtc caaaatccgt aatcaaggtt ttgagttgct
      601 gtggtttaaa aaattttatt tcagctctgg ttgaattccg aattaagcct gatttttgta
      661 gaacttttct tttccattct aaaaagttta cgctatgaaa aaaacttctt tccttctgtt
      721 tattcaagcc ctgttcttgt tttcagcatt aagtatttcc agcagcggat tggctcaatc
      781 cactaaagac agggtaatta ttgaggacgc tgattccgca cgggcagact ttatacgaac
      841 cgatctattg atgaaaagtc tttttgacag cgcgtatggc tatgttatat ttcccaatat
      901 tggcaaggga gcaataggcg tggggggagc agccggaaat gggatagtgt atgaaaaagg
      961 ggcaatgata gggaaagcca gcatgaagca ggtcacaata ggcttccagt ttggggggca
     1021 ggcgtaccgt gaagtgatat tctttgaaaa taaggaaacg ctcgaccggt tcagagagga
     1081 taaaatagaa ttctctgcgg aagcttctgc tgttgctgct acggtgggcg ccgctgccca
     1141 cgccaaatac accaatggca ttatgatctt cactcaactg aaaggaggat taatgtatga
     1201 ggcttctgtc ggcggacaaa aatttaatta cacggcattt taagaaacca atacataggc
     1261 acagcgacag cgcgatcgta tctatagggc gttttcagta cacatgaaaa gtaagggctg
     1321 cggtaaggat tttttacatg cttactttcg caagatcttc tccattgatt tccctttagc
     1381 cagttcatca attaacttat ccaggtaacg cattttttga atgactttat cttcgatttc
     1441 ttcgacccgg tagccgcaaa ttaaacctgt tatctttgaa acattaggat tgagcgcagg
     1501 cgcttcggcg aaaaatgttt cgaaatcact ttttttgtca atttgttttt gcaatgtctg
     1561 tttgttgtag ccagtcaacc aaaaaataat cgcgtcaact tcttcctttg tccggccctt
     1621 tttctccgcc ttttttatgt acagcggata tacactggca aaaacaagtc tgtataccct
     1681 ggtcttgtcc atttttaatt tgttatcaga tgtcaaattt aatgtggttg gccaaaaatt
     1741 tattgctgta tacggtctaa gttactggta tcttactggt agcatgttca tttttagaag
     1801 taataacaat gaaatcatca atacagttcc tatgcctgcc actatattta cgaatctttg
     1861 tgccttaaca tgatcgttga agcctttgtt aattgctcca aatattatta atccaattat
     1921 tccccccgac atattagtaa ttatgtctgt aatgtcaaag gccccaattt taaaaataaa
     1981 ttgaagtgtt tcaaccactg aactggttaa gaaaatcaat aaaagtttag taccaaaagt
     2041 ccatcttgta aacagaaccc cggcatacat accaagcggt ataaagatca ccacattcga
     2101 gatgagctcg ccgcgatcag ggtgattaaa cgcgattaag tttacgctcc tgtttcccat
     2161 gtaagaaaac cggacaccca acttaagcag taaaatccaa aatattgcga gcaaataaat
     2221 gacaaataaa atgatagtta cattgtttgt tgtacgatta tcttcactgc taatcctgcc
     2281 cgttttttcc aacttcatgt tttttagtct ccttttacgc tgcaccagcc tacaatctta
     2341 ctgatttttt tgattttatc gttccattca tgactagtgg ttccatcttt actaagtggt
     2401 tagcgattga cctctacttt catttctttg atttggtatt taaaatatgc tgcaattttt
     2461 gaagcttctt tgtgtgcgtt gcttttggca agccaaggtc agccgtcatt gcctctcgtc
     2521 agttagtttt gttctttata ttttcggtaa agtccaccat ccattcaata ccatatttgt
     2581 cagcaaacat tccaaaatat gaacctaaag gaccgtctgc aattggcatt tcaactttac
     2641 ctcctgctga aagtgcgttg aataatttgt cggcttctgc tttgctttcg gcgctaataa
     2701 agattgtatt tcggttgtcg ttttccgtta cttgtcccat actttctaaa acgtcactag
     2761 ccattaacac attgttttta ccgataggca acacaatatg catgatccta tttgcatcat
     2821 tttccggtat tgggtattca ggggttgaca ggtctttgta acgtataatt cgtgcaaagt
     2881 ctccgccaaa tactgatttg taaaatgtaa aagcttcctc cgcatttccg ttgaagtgaa
     2941 tataaggatt gataactgcc ataattttta tttttgagta ttaatattta ttatacgttt
     3001 ttattcaagt tcttcgcatt caaaattttg attttttagc atggttatta ttggcaagat
     3061 gatattttct tcgctatcaa tgcgcagtac tttgtcgcag tcatccaggt caaagttcca
     3121 ttttgctttt ggcaagattt tgtcaatatg cggtttaagt ttctttgcct ggatttttgt
     3181 tttgacagat gttttgaaaa cgtaaatcat ttttgcgata aagttgccag taattcatcc
     3241 aaattttgca tttgcattgc atatccttcc ttgaaaccca tttcaatcat tttctcaagg
     3301 cgtgcaaggg attcgttgta aatagtaata gtgactgttg tcgttcccgt ttgttcgctg
     3361 aaattaaaat cccattcaga tcctggcaat tcagggtttt catctttgtc cgcaaaagca
     3421 ttaaagaatt tgaaattggt ttttggagta atcgaagtat atttctgaat tgaccaacgc
     3481 tcttgtcctt ccggacttac catagcatag aatcttcgtc cgccaacttc aaatttcatt
     3541 gattttgttt ttgacatcca cggtttaggt gcccaccatt ggtcaagaag ctcttgtttg
     3601 gtataagcat cccataccag cgaaaggggc gcatcaaatt ccctggttat atataccgtt
     3661 tttgctgctt tgtctacggt aaaatcaaat agcagatcat ttttcatttt ttctgttttt
     3721 taattgttga taatactttg tcaagttgat tgaaccgggc ttcccaaatt ttcctgtatt
     3781 ggctaagcca tttatcaatc tctttcatct tttcgatttc aagtgagtaa tagatttccc
     3841 tgccttgttg ttcctgtttt actaattcgc attcggttaa aatgcgaagg tgttttgaaa
     3901 cagcttgtct tgtggttttg aaattttcgg cgatggcatt tggcgtcatt gcctgtaatg
     3961 caattaaggc tataatggct cgccttgtcg ggtcagctat cgcctggaaa atgtctcgtc
     4021 tcatacgaat gaaattttta cgcaaccaat aggttgcaaa tatatgtgca actattcggt
     4081 ttcgcaaaat ttaaggacaa ttattttttt ccggtatggt ctaaagccaa catcaagccc
     4141 ggacggtggt agttccttgg cgattgatct tgcccacatg ccgacagcac attccgacga
     4201 gcgtccacac tgttagaaac aatttgtttt atagaggtaa agattcagaa tttagcgttt
     4261 ttgtttttcc atttcaagag ccaaatattt ttctaaattc tttgtttgat ttttcttcat
     4321 ctcaccttcc gataatgcaa ccgcaagttt ttcaataatt attgctaagg gataatcttt
     4381 tcttgctgcg tagatcgccg ctaacacgtc ataaaatgcc ggcgagttaa agttggtttg
     4441 ttgaataccg cgtatgatag cattatagcc aatttgcaat aattgcgaat cgacttcacc
     4501 ttgtatatgc gccacctgcc aacccataac taagtatgta ttaggtctta cataaaggaa
     4561 atttgtaagt aattgcagcc cataattaat agcagagtca aaaacttttg tctttaatgc
     4621 gtggttgaat ttgagcaaag ttttttctgc atcaatccct gatatatatt cttctcttaa
     4681 acgggttaca tcgtaattgc cttccatgac atcatctaat gttttgtcta tggttgacgg
     4741 gtcacccata taaacgattt taccatttct gtcaataaga aacgaagttg gtagattgcc
     4801 aaatccgctt tgttgcatcc agggatgaag ccaaatgcct tcttcagtat ctttcatgga
     4861 aggagcgacc caggcaacat tataattcat cagagaatct tttttcaaaa tgaaattctt
     4921 tacactttca agggtatttc catatttgtc ctcgcttgta atcccaatta cctccaggcc
     4981 attcgcctta tacttttttt gtaattcgga taaatgcggc attccaacga tacatggaac
     5041 acaccaggtt gcccataaat caattaaata aactttgcct ttttcaaaag gcttaaatcc
     5101 tccatcctta agccattgtc caattcttaa ttctggtgca ttgtctccaa ttgttaactg
     5161 aggagatcga gaattgtttt gagccaaggc tatcctattg cagaaagtcg caatggtcaa
     5221 tagaaagata caataacaat gtttcatctt gattacgttt ctgggagagg ccatcaattg
     5281 tgtatgaaag ttcgatttta ttaaatgaaa tttactgatc ttaaagtttt tctttcggga
     5341 acagaaaaaa tcactcaatc acaatctaaa tcatgcgtac cgattttgca gccaataaaa
     5401 gtatttgaca cattgcgccg gccggttgag ccgggattga acgaggttaa gtaaacagct
     5461 gctgcggatt gttatgcctg cctgtataat gggcgtcagc cctggttgca accctcaccc
     5521 tggtctcaga gggaagtcgc aaatccatat ccaattgccg ctgcaagtat atctatgttt
     5581 atgtctttta gacttttgaa cttaatgcaa tatccgctca cgctcgcctt gccgagtctt
     5641 tgtccatatg tctcagctaa atatttttta tctttaatac cgaggatata aacagagatc
     5701 cctgttttgt ttgcactgat accgatttca taaaattccc tggtttttcc atcggcatat
     5761 tttatggtgt gaactccata tcctatgtta ggattagaca cggttttgtt ttcaccgtct
     5821 tttccatcga ggaaccataa tttacatcca ggcattactt ccagaatgat gcgatgcaat
     5881 gcttccatgt ccctgcgttt tgcttcgggc tggctggaaa tatagttttt gatttcttct
     5941 tgtacttcca tataaatatt aaaattattg gttgcttact tcaaggtcag gtactcaatt
     6001 cgtcgactaa tttaacggta ttccacacca tgtaattttg ttttactgaa aaatggttat
     6061 tcgcttcgac ttgcttaatt gttacagtta tgcttgagga ggagacgagt aaacatttga
     6121 tgccgattga acgaaaccga gcgcggagct gaactctgcc attgcaacta gtcagttaac
     6181 gtgtgtcgcg ctatcgtagg aaacaaaatg ccccatgcga gcaaagagca gactcgtgca
     6241 tgcagcaaca accttcgacg cgcgaacttt tatgaaatgt gataagctga atgatattca
     6301 aaccgctgaa gtagccccga ttgcagcgga aaacccggtg aaggatttga gggcggcttg
     6361 cgccggattt gaagcgtaaa gcgggcactg cagatgaaga gtgcgtgttc gctggtgctt
     6421 caaaaattat ccattcacat gtcatagtat ccgtccgtta ctttcgatta agaga
//
LOCUS       DASQJI010000231         2432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1097136,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000231 DASQJI010000000
VERSION     DASQJI010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097136"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..977)
                     /locus_tag="VEV83_06720"
     CDS             complement(156..977)
                     /locus_tag="VEV83_06720"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK44840.1"
                     /translation="MINDQPYTTLNNGIRMPLFGLGAWDMYGKEAEQATLDALDIGYR
                     LIDTATLYNNEKEIGNAVRRCGRPREEIFVTTKVPNSKHGYDPTLKAFDASMKTLNID
                     YVDLYLVHWPVRGKRKETWKALEHLYNSRQVRAIGVANYLMPFLNELETYSTVTPAVN
                     QLEFTPWLYLKNELQYCVEHKIQLQSYSPLTRGRKFNDERLLKLSKKYNKTPAQIILR
                     WNIEHGISTIPKSSNKKRLKENFDIFDFSLSKEDIEWMDTFNENFRVVEDPMWMF"
     gene            complement(1100..2083)
                     /locus_tag="VEV83_06725"
     CDS             complement(1100..2083)
                     /locus_tag="VEV83_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HYK44841.1"
                     /translation="MQQETMAATMAPNMIPGNAHKDIPGNPSTAKSSATKLNDRSNGK
                     PLRVLSEDDWNFWVTNGYVVIRNAVPREQALETAKFLWEFEEKDPNDPSTWYAPPRAE
                     MKMKELTNTGMVEVYNNQYLWNNRMTQKVYDAFVDIWGTEKLWVTIDRANLNFPIRPG
                     FEYKGFIHWDYDPETKPVNVQGVLALADQTDENMGGFQCIPELFRTYDTWKLTQPEDR
                     DHFKPDITGFELVKVKMEAGDLLIFNSLQPHGIRPNLSGDKVRIAQYISMMPAEEDNA
                     ALREWRINSWKNRIAPEGYAFPGDPRNWEQTKYGTAELTPLGRKLLGLENW"
BASE COUNT          583 a          598 c          468 g          783 t
ORIGIN      
        1 caacgaacac aacggttaga tgaattttct ttgtgcccgt agtggttcgt ggtgtccttc
       61 gtgctccact gcatttctcg tcgtttaaaa ttttaatatt caatttgcaa tcccaaatcc
      121 gcaatctcca atccgcaatc gccaatctgc aatcgttaaa acatccacat cgggtcttct
      181 acaacgcgga aattctcatt gaaagtatcc atccattcaa tgtcttcctt tgaaagcgaa
      241 aaatcgaaga tgtcaaaatt ttccttcagt ctttttttgt tcgaagattt tgggatcgtc
      301 gaaatgccgt gctcaatatt ccatctcaaa ataatttgcg ctggcgtctt gttatatttt
      361 tttgaaagct tgagcaatcg ttcatcatta aatttccgtc cgcgggttag aggcgagtat
      421 gattgtaact gtattttatg ttcgacgcaa tattgcaact cgtttttcaa atacagccat
      481 ggagtaaatt ccagttgatt caccgcgggt gtcactgtgc tatatgtttc cagttcgttc
      541 aagaaaggca ttaagtaatt tgcaacacca attgctctta cctgccggct gttataaaga
      601 tgctccagcg ctttccatgt ttcttttctt tttccgcgaa ctggccaatg aacaagatac
      661 aggtcaacgt agtcaatgtt tagcgtcttc atacttgcat caaacgcttt taacgttgga
      721 tcatatccgt gctttgaatt cggaactttt gttgttacaa agatctcttc ccttggtcta
      781 ccgcatcttc ttacagcgtt ccctatttcc ttttcattgt tgtataaagt tgccgtgtct
      841 attaaccggt aaccgatgtc cagcgcatcg agcgtcgcct gctcggcttc tttgccatac
      901 atgtcccatg cccctaaacc aaacaacggc atgcggatgc cgttgttaag tgttgtatac
      961 ggttgatcat ttatcataaa tactcttgcc cttttcgtcc ttttttagtg tttcaactct
     1021 gatggccgat caggaatagg attcagcagc aatctcgaat ttcaacagcc attcacaact
     1081 cacaattcac tattcacaat caccagttct caagtccgag caacttcctt cccagcggag
     1141 taagttcagc agttccatac tttgtttgtt cccagttacg cgggtcgccg ggaaacgcat
     1201 atccctccgg agcgatccgg ttcttccatg aattaattct ccattccctc agtgccgcgt
     1261 tatcttcttc agccggcatc atagaaatgt attgtgctat tctcacttta tctccgctca
     1321 aattcggccg aatgccgtgt ggctggaggc tgttgaatat taaaagatcg cctgcttcca
     1381 tttttacttt cacgagttca aagccggtta tatccggttt aaaatgatcg cggtcttccg
     1441 gctgcgtaag tttccatgta tcgtacgtgc ggaataattc agggatgcac tgaaagccgc
     1501 ccatgttctc atccgtttga tccgcgagcg caagaacgcc ctgcacattt acgggtttag
     1561 tttccggatc ataatcccag tgaatgaaac ccttgtactc gaaaccgggc ctgataggaa
     1621 aattaagatt cgcccggtcg atcgtcaccc ataatttttc ggtgccccaa atgtcaacga
     1681 acgcatcgta caccttttgt gtcatcctgt tattccacaa atattgattg ttgtaaactt
     1741 ccaccatgcc cgtattcgtc agctctttca ttttcatttc ggctcttggc ggcgcatacc
     1801 acgtagacgg atcgttcggg tccttctctt caaactccca taaaaatttc gctgtctcaa
     1861 gcgcctgttc acgcggaacc gcattcctga taacaacata tccattcgta acccagaaat
     1921 tccaatcatc ctcactcaac acgcgaagtg gtttgccatt gctgcggtca tttagttttg
     1981 tggcgctgct ttttgcagtt gagggatttc cgggaatatc tttatgcgca tttccgggaa
     2041 tcatattcgg cgccatcgtg gcagccatcg tttcttgttg catacaataa tctttattga
     2101 tttataaata taaaatttag taacggacat ttccgctgcg ttttgctgca ccagccgtct
     2161 tcacggcgat gcttgcattg tttcttcaac agattcgttt cgccggactg atcgcgaagc
     2221 aagacatcgt ttctgttctt tacgatttgc tccttgtgat tttcaccctg cataataact
     2281 gtttgtcagc aacaaaaata gttgcaggcg agcgctattg tcaacagctg caatgaccgg
     2341 tttttgttct gtattgacat ttttttacta gtttgcaaat accgcggcat aaacagcgca
     2401 aatgaaggct aaactagaag cgatatcatc cg
//
LOCUS       DASQJI010000232         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1558582,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000232 DASQJI010000000
VERSION     DASQJI010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558582"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..627)
                     /locus_tag="VEV83_06730"
     CDS             complement(37..627)
                     /locus_tag="VEV83_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HYK44842.1"
                     /translation="MAKKKFVVGCFDDEDVLFPAVKKVRLAGYKIHDVYTPFAVHGLD
                     HAIGLKETSLHTAGFIYGITGTTIALGGMGWVFTADWPLNIGGKPHFPLPAFIPITFE
                     LTVLISAVGMVLTFCYLCQMAPFVKKHHFHPRATDDFFVMVIEATSRTNVNDLQDFLR
                     NAGAVEVSVQEVESGWWIGTYDKEQRLIKEDTQVVI"
     gene            complement(669..>1826)
                     /gene="nrfD"
                     /locus_tag="VEV83_06735"
     CDS             complement(669..>1826)
                     /gene="nrfD"
                     /locus_tag="VEV83_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HYK44843.1"
                     /translation="LISAILLLFRQGWRTGVNRAAEAMTIFAVMCAGQFPIWHMGRVW
                     MAFFTLPYPNTRGPVWPNFASALMWDVFAISTYFTVSLLFWYSGLLPDFATIRDRAKT
                     KLRKLLYGIASFGWSGSTKHWQRHESLSLVLAGLATPLVLSVHTIVSFDFATSVIPGW
                     HTTIFPPYFVAGAIFSGFAMVQTLLLITRKVLHLEEYITIGHIEAMNKVIVLTGSIVG
                     CAYLTELFMAFYSQNQYEAYAFFYTRANFFSPYGWAYYSMMFCNVVSPQIFWFRKLRR
                     NLWVTMFLSIVVNVGMWFERFVIIVTSLFRDYLPSSWPVYYSPTIFEIGFYVGTFGLF
                     FTCFFLFSKYFPVIATAEIKHILKVSGENYKDKMDRIEVKSSEEFAHEYAH"
BASE COUNT          549 a          443 c          390 g          444 t
ORIGIN      
        1 taaatatgaa tgattgaagt ttcatttccg atttaattag attacaacct gcgtatcctc
       61 tttgatcagt cgttgttcct tatcatacgt gccgatccac cagcctgatt caacttcctg
      121 tacgctaact tctacagctc ctgcattgcg aagaaaatcc tgcagatcgt tcacatttgt
      181 tctcgacgta gcttctatta ccattacaaa gaaatcatca gtggcacgcg gatgaaaatg
      241 atgtttcttc acaaatggcg ccatctggca gagataacaa aacgtaagca ccatgcccac
      301 agccgagatg agtaccgtca attcaaacgt aatgggaatg aatgcgggaa gcggaaagtg
      361 aggttttcct ccaatattca atggccagtc tgcggtgaac acccaaccca ttccgccgag
      421 cgcaatggta gtgccggtga taccgtaaat gaaacccgcc gtgtgaaggc ttgtttcctt
      481 caacccgatc gcatgatcga gaccatgcac tgcgaacgga gtatacacgt cgtggatctt
      541 ataacctgcg aggcgaactt ttttcactgc aggaaacaag acatcctcat cgtcgaaaca
      601 acctacaaca aatttcttct ttgccatatg cgatcccgct tttggcggag attttacgtt
      661 atcaaatatc aatgcgcata ctcatgcgca aactcttctg acgacttcac ttcaatacgg
      721 tccatcttgt ccttatagtt ttcgccagat acctttaata tatgtttgat ctccgcagtt
      781 gcgataaccg ggaaatattt tgagaacagg aagaaacagg taaagaataa accgaaagtg
      841 ccaacataga accctatctc aaaaattgtc gggctataat ataccggcca tgatgatggc
      901 agatagtctc taaacaacga ggtaacgatg ataacaaaac gttcaaacca catacccacg
      961 ttgaccacga tgcttaaaaa catcgtcacc cataaattac ggcgcagttt tctgaaccag
     1021 aatatctgcg gggaaacaac attgcagaac atcatgctgt aataggccca tccataagga
     1081 ctgaagaagt tcgcccttgt ataaaagaac gcataagcct catactggtt ttggctgtag
     1141 aacgccatga acaattctgt gaggtatgcg caaccgacaa tagaaccggt tagaacgatc
     1201 actttattca ttgcctcgat gtgcccaatt gtgatgtact cctcgagatg caaaactttc
     1261 ctggtgatca aaagcagtgt ttgcaccatc gcaaaacccg aaaaaatggc gccggctaca
     1321 aagtatggcg gaaagatggt agtatgccaa ccgggaatta ctgacgttgc gaagtcgaag
     1381 gatactattg tgtgaaccga caacacgagc ggtgttgcga ggcctgctaa caccagtgaa
     1441 agcgattcgt gacgctgcca gtgttttgtt gaaccgctcc agccgaatga tgcgattcca
     1501 tataataatt tacgcagttt agtttttgcc cggtcgcgta tagttgcgaa atccggcaac
     1561 aaaccggaat accaaaacaa aagtgatacg gtaaagtacg tggaaatcgc gaaaacatcc
     1621 cacataagag ctgacgcaaa atttggccaa acgggaccgc gcgtgtttgg atagggtaaa
     1681 gtgaagaacg ccatccaaac ccttcccata tgccagatcg gaaattgccc ggcacacatt
     1741 actgcgaaga tcgtcatggc ctccgccgca cggttcactc cggttctcca cccctgcctg
     1801 aacagcaaaa gaattgctga gatcag
//
LOCUS       DASQJI010000233         5296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1866820,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000233 DASQJI010000000
VERSION     DASQJI010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866820"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(318..1982)
                     /locus_tag="VEV83_06740"
     CDS             complement(318..1982)
                     /locus_tag="VEV83_06740"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HYK44844.1"
                     /translation="MRKLLTSLFICAIVSCHKPVYDTIIRNGTIYDGNGGEPFKGDVA
                     INADTIAFIGDLKNASAKNEVDAVGKAVAPGFINMMGHSEEALFQDGRSQSDIRQGVT
                     TEIFAEFSMGPLNPKMKEQLQKNQADIKYPVNWNTLGEYMNVLEKKGISCNIASFVGT
                     GTVRQYVIGEDNIAPSPPQLDSMKLLVDQAMEEGALGVTNALIYPPDFFAKTDELIAL
                     SKEASKYGGMYTSHMRSEGNKLTQAVQELITISKEANIPAEIFHLKAAGKNNWNKMDS
                     VITMVNNAQNEGLHVTADMYTYLAGATGLTSVFPPTLQDGGFGKLWERLHDPVTRKQM
                     AKAMNTDAEDWENLYYGAGGAEHVLLLGFKQDSLKKFTGKTLAEVATLRGTSPEETAM
                     DLIIQDSTRVGVAYFMMTEDNVKKQVALPWVSFGSDEGSYTNSGVFLKFNAHPRAYGN
                     FARVLGSYVRDDKALSLQQAIYKLAKLPATNLKLQKRGELKVGNYADVVVFDPATIQD
                     HATYEKPHQYATGVSDVFVNGKQVLKNSEHTGATPGRFLKGPGYKR"
     gene            complement(2186..3778)
                     /locus_tag="VEV83_06745"
     CDS             complement(2186..3778)
                     /locus_tag="VEV83_06745"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HYK44845.1"
                     /translation="MKLSHRHIRSFLLSPVFLITSHIAAQEICNNGVDDDGDGLTDLY
                     DPDCQCRFTVTGNLLQNASFESYDHCPASYTYTNDHDIINAWEYGTYTNINEANFYHN
                     LKCPYDSTQVMLNMPPSLPLPEGNAFISIVNTPYLDNRPEKDMTKSYVGQCLQTPLVK
                     GESYTLSFDAGRFRSWDNLTGKMFPFTVAVFGNADCNAVPFGKVDAAGNGCPSNYNGW
                     VLLGKRTMYSNGQWVQGTVNLKMPHDIHVIEVGVDCSILESIHDLTDSTTYLDYHVYY
                     LDDLHLLPTKDFPFQYIQTQLQSGCTGLPVLQAPNFAGGSYQWYKDSIAIAGATGITH
                     QVTDTTGQHYYNVMITTSNKCITSEPFFLVASRLYDIHIPTDTTLCINDTMILAPAFD
                     GITYTVNGEIGTAVSISKEGSYTITATDIYGCQKTFVTKVALQNCNDCDAFVPTAFTP
                     NGDGLNDLFKAKVNCALSQFHLRIYNRWGKTIFQTGDINRGWDGTLSGIKLPPGTYVY
                     LIDYKTKTGAARMTRGTIVLMM"
     gene            complement(4146..>5296)
                     /locus_tag="VEV83_06750"
     CDS             complement(4146..>5296)
                     /locus_tag="VEV83_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HYK44846.1"
                     /translation="LSCVENYFKDFISKNYSDRHVIYGRCAHLTEPQQIHLDQGRAQC
                     QNRTLCQRGCPFGGYFAANSTTIPWAIKTGNLTLRPFSVVESIIYDDQKEKVTGVRVV
                     DAKTKQAIEFYARIIFVNAAALNTNLILLNSVSGRFPNGLGNDSGLLGKYVAFHNYRA
                     RISATYDGFPESTTEGRRPTAAYIPRFRNVVKQETDFLRGYAAGFAANRPVNQDNDGV
                     GKTLKDNLGKKDLGPWRVGSHMMGETIPKETNYVSLDKTKKDEWGVPLLNISVEYDDN
                     DEKMVNDFIGQLSEMYTKAGFKDIKTTDSHAAPGLDIHEMGGVRMGKDPKTSMLNSWN
                     QLHACKNVFVTDGACMTSTSTQNPSLTYMAITARACDHAVDELNKGNL"
BASE COUNT         1348 a         1214 c         1142 g         1592 t
ORIGIN      
        1 ctgcgggcac ggattgtcac cgatctgtat ttttggattt taatttttga tttatttgga
       61 tcttgagatt tgcgatttgg atttttgatt ctccgcatct tgcgattttg caatttggaa
      121 cataaagagt gtaggataga acacggatga cactgcctgc gggcacggat tgtcaccgat
      181 ctgtattttc ggattttaat tttttgattt atttggatct tgagatttgc gatttggatt
      241 tttgattctc cgcatcttgc gatttgcaat ttggaactta aaacatgatc cgcccaatct
      301 gtgtcacgcg tgttccttca ccttttgtaa cccggtcctt tcaaaaacct gccgggtgtt
      361 gctccggtgt gctcactatt ttttaagacc tgcttgccat tcacaaaaac atcgcttacg
      421 ccggttgcat attgatgcgg cttttcatac gttgcatgat cctggattgt ggccgggtcg
      481 aagaccacca catcggcgta gttaccgact ttcagttctc cacgtttttg caatttcaaa
      541 ttagtggccg gtagtttagc caatttatag atcgcctgtt gaagactcaa tgctttgtca
      601 tcccttacat agctcccaag cacgcgcgca aaatttccat atgctcttgg gtgtgcatta
      661 aattttaaga acacaccgga atttgtgtag gaaccttcat cactgccaaa acttacccag
      721 ggtaacgcca cctgtttctt tacgttgtct tcggtcatca tgaaataagc aacgcctacc
      781 cgtgtactgt cttgtataat gagatccatc gcagtttcct ccgggctggt gccgcgcaat
      841 gtcgctactt cagccaacgt ttttcctgta aactttttta atgaatcttg tttgaatcca
      901 agcaatagca catgctccgc gccgccggct ccatagtata aattttccca gtcttcggca
      961 tccgtgttca ttgcttttgc catttgtttc ctggtgacag gatcgtgcaa acgttcccac
     1021 agttttccaa agccaccatc ctgcaatgtt ggaggaaaga cggaagttaa accggttgcg
     1081 ccggccaggt aagtgtacat gtcggcagta acgtgcaagc cctcgttttg cgcattatta
     1141 accattgtta taacgctgtc cattttgttc cagttatttt ttccggcggc cttgaggtga
     1201 aaaatttcgg caggtatatt cgcttctttc gaaatggtga taagttcctg cacggcctgc
     1261 gttaatttgt ttccttcact tcgcatgtgg cttgtgtaca tgcctccata ctttgaagct
     1321 tctttcgaca atgcgatgag ctcatccgtc tttgcaaaaa aatcaggagg atagatcaac
     1381 gcatttgtta cacctaatgc tccttcttcc atagcctggt caaccagcag cttcatgctg
     1441 tccagctgcg gcggactagg tgctatattg tcttcgccta tcacatactg acggaccgtg
     1501 cccgtgccga caaatgaggc gatattgcag gagatacctt ttttctccaa cacgttcatg
     1561 tattcgccga gtgtgttcca gttcaccggg tattttatat cggcctgatt tttttgaagc
     1621 tgctctttca tttttggatt gagcggaccc atgctgaatt cagcaaatat ttcagtggtt
     1681 actccctggc ggatatcgct ttgagatctg ccatcctgga aaagtgcttc ttcagaatgt
     1741 cccatcatgt tgatgaatcc gggtgctact gctttgccaa cagcgtcgac ctcatttttt
     1801 gcggaagcat tttttaagtc gccgataaaa gcgatcgtgt cagcattgat cgcaacgtca
     1861 cccttgaaag gttcacctcc attgccatca taaatggtcc cgtttcgaat gatggtgtcg
     1921 taaactggct tgtggcatga aacgatcgcg cagataaata acgatgtcag tagttttctc
     1981 atgagcgtat gtattaaaaa ttccaaattc caaaatggca agatccaaat aaaataaaaa
     2041 attgaaaaag gaggtaagaa ataagaaaca gaaaaataac aaagaatctg caatctgcaa
     2101 tcgccaatct gcaatcgcat gaaacgttcg tcaagaccag agatcagaga tcagacatca
     2161 gagatcagac atcagcgatc cttatctaca tcatcaacac aattgttccc ctcgtcatcc
     2221 tggccgcgcc tgttttggtt ttatagtcga tcaaatacac atacgtgccg ggcggtagct
     2281 tgatgccgga aagagtaccg tcccaacctc tgtttatgtc cccggtttga aagatcgttt
     2341 tgccccaacg attatagatt cttaaatgaa attgcgacaa cgcacaattg accttcgcct
     2401 taaaaagatc atttaaacca tcgccattgg gtgtgaaagc ggtcggtaca aaagcgtcac
     2461 agtcgttaca attttgcagg gcaacttttg ttacgaaggt tttttgacag ccgtaaatgt
     2521 cggttgccgt tatggtgtat gaaccctctt tactgatcga caccgctgtg ccgatttcgc
     2581 cgttaacagt ataagtgatg ccgtcgaatg cgggagcgag gatcatcgta tcgttgatgc
     2641 atagagttgt atccgtggga atatggatgt cgtataatct gcttgcaaca agaaaaaaag
     2701 gctctgacgt gatacactta ttacttgtgg tgatcatgac attataataa tgttgcccgg
     2761 tggtgtcggt tacctggtgt gttatgccgg ttgcacccgc gatggcgata ctgtctttat
     2821 accattgata gctgccgccg gcaaaattcg gcgcttgtaa aaccggcaat cccgtacaac
     2881 cgctttgcag ctgcgtctgt atatattgaa aaggaaaatc tttcgttggc aacaagtgca
     2941 ggtcatcaag gtaatagacg tggtaatcca aatatgttgt gctgtcggta agatcatgga
     3001 tcgattcaag tatcgagcaa tcaacaccaa cctctatgac atgaatgtcg tgaggcatct
     3061 tcagattcac tgttccctgc acccactggc cgttgctgta catggttctt ttacccaaca
     3121 aaacccaacc attgtagttt gaagggcaac cattccctgc ggcatcgacc tttccgaaag
     3181 gaacggcgtt gcagtctgcg ttgccgaaaa cagcaactgt gaaaggaaac atttttccgg
     3241 taagattgtc ccacgatctg aacctgcctg catcgaagct taacgtataa gattcgcctt
     3301 ttacgagtgg tgtttgtaaa cattggccaa cataactctt cgtcatatct ttttccggcc
     3361 ggttgtcgag gtagggcgta tttacaattg aaataaatgc attgccctcc ggtaatggca
     3421 ggctgggcgg catgtttaac attacctggg tcgaatcata cggacatttt aggttgtgat
     3481 aaaagtttgc ttcattaatg ttggtatagg tgccatattc ccatgcatta ataatatcat
     3541 gatcattcgt gtacgtataa cttgccgggc aatggtcata agattcgaac gacgcgtttt
     3601 gcagaagatt acccgttacg gtaaaacggc attggcaatc cggatcatag aggtcagtta
     3661 aaccatcgcc atcatcatcc acaccgttgt tgcagatctc ttgcgccgcg atgtggcttg
     3721 taataagaaa aaccgggctc aacaaaaagg acctgatatg cctatgcgat aatttcataa
     3781 acctgcaaaa aaatttgagc cttacattca aacatcagcg gttcggaggc tataaagtta
     3841 agtattgcaa ttagtgcaac taatcaataa cgtcttcgtg ctagtcattt ttgtagtgtg
     3901 cagctcattc tcctactgtg tctttatgtc ttcgagtctt cgtggttcaa aagaacagaa
     3961 actactaaga caccgagcca ccacgttttc acaaagtctg gccggtttct cctaaaccat
     4021 ctttgatttt taatagcaca acgcgttaat caataataaa acgcacgtct gtccacgaca
     4081 ggttgcctgc caccagatat taccgttaat actgctgcgg agagaagtct gtgtgcaaaa
     4141 agaagctaca ggtttccttt gttcaattca tcaacagcat gatcacaagc cctggctgtg
     4201 atggccatgt aagtgagtga cggattttgt gttgatgtgg acgtcatgca tgcgccatct
     4261 gtgacaaaca catttttaca cgcgtgtaat tgattccaag aattgagcat ggatgttttt
     4321 ggatctttgc ccattcgcac accacccatt tcatggatgt caagccccgg cgctgcgtgt
     4381 gaatcggttg ttttgatatc cttgaacccg gcctttgtgt acatttcgct gagttgcccg
     4441 atgaaatcgt taaccatctt ttcgtcgtta tcatcatact caacagaaat gtttaaaagc
     4501 ggcacgcccc actcatcttt ttttgtttta tcaaggctta cgtaattcgt ttcttttggt
     4561 atcgtttcgc ccatcatgtg agaacccacg cgccacggtc ccagatcttt ttttcccaaa
     4621 ttatctttaa gtgttttacc cacgccatca ttgtcctggt tgacgggtct gttcgctgca
     4681 aaaccggcgg catagccacg caaaaaatct gtttcctgtt tgactacgtt tcgaaagcgt
     4741 ggaatgtatg ctgctgttgg tcttcggcct tccgttgttg actcgggaaa accatcgtag
     4801 gtcgcagaaa tgcgcgcacg ataattatga aacgcaacgt atttacccag caaaccgcta
     4861 tcgtttccta aaccattcgg aaaacggcct gagacagagt tcaataaaat aagattcgtg
     4921 tttagcgctg cggcatttac aaaaatgatt cgcgcataaa attcaattgc ctgtttcgtt
     4981 ttcgcgtcga cgacacgaac accggttact ttttcttttt ggtcatcata aatgatcgat
     5041 tccacaacag agaaaggacg cagcgtaaga ttcccggttt ttatcgccca tggaatggta
     5101 gttgaattag ccgcgaaata tccgccgaag ggacaacctc tttgacacag cgtacggttt
     5161 tgacattgcg ctctgccctg gtccaaatga atttgctgcg gttctgtgag atgagcacac
     5221 cggccgtata tcacatgacg gtcagaataa ttttttgaaa tgaagtcttt aaaatagttc
     5281 tcgacgcaac tcaatt
//
LOCUS       DASQJI010000234         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1098420,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000234 DASQJI010000000
VERSION     DASQJI010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1098420"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1024
                     /locus_tag="VEV83_06755"
     CDS             134..1024
                     /locus_tag="VEV83_06755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HYK44847.1"
                     /translation="MGHEHHHHTQPTAASTAFIIGISLNFLFVLVEVVAGLYIHSLSL
                     LSDAGHNLADVAALSLSLLAYRLLKVRSNENYTYGYRKTSIIVALFNAMVLMLSVGAI
                     IYEAAHRFFHAEPLPGGTIAWVAGVGIVINGTTALLFLRDRKKDLNIKSAYLHLMSDA
                     LISAGLVVGGIIISFTNWFWLDPALSFIIACTILLSTWKLLKESLRLSLDGVPADMNL
                     QEVKDAAKKISGILNIHHVHLWGMSTTENALTAHIVIDANASLEDAEKIKHDFKHELK
                     HMNIQHVTLEIESSDEKCEE"
     gene            1157..1282
                     /locus_tag="VEV83_06760"
     CDS             1157..1282
                     /locus_tag="VEV83_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44848.1"
                     /translation="MNDDPMGLHYKGPNTSYNVILAKAGIPFYAEEFTNTERVTN"
     gene            complement(1517..>1703)
                     /locus_tag="VEV83_06765"
     CDS             complement(1517..>1703)
                     /locus_tag="VEV83_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44849.1"
                     /translation="PNSAQSQRTLFTRMKPVIVAENYVYTAEAWRKGKGFGKRLSKLI
                     FQGSVQKYFMREGFLSC"
BASE COUNT          491 a          408 c          354 g          450 t
ORIGIN      
        1 tgatagtcgc gcgaaattct tagtattcca ttttcacaat gtagttatcc agcagaccca
       61 gtaaaacaag ccagcgcttt agaatgaatg ccaccacact ttaatatttt aatactttcg
      121 tccgaacgca actatgggcc acgaacatca tcatcacact cagccaactg ctgcaagcac
      181 tgcgtttatc attggtatct cgcttaattt tttgttcgta ctggttgagg ttgtcgccgg
      241 gttgtatatt cattcccttt cattgctcag tgatgcaggc cacaatctcg ccgatgtagc
      301 tgcactcagt ttgtcgctcc tcgcctaccg cttgttgaaa gtacgttcca acgaaaatta
      361 cacttacggg tacagaaaga cgtcgatcat cgttgcgctt ttcaatgcta tggtattgat
      421 gctttccgtt ggcgcgatca tctacgaagc agcacacagg ttctttcatg ctgagccgtt
      481 gcccggcgga acgatagcat gggtagcggg cgtcggtata gtgatcaatg gcacaaccgc
      541 attgcttttt ttgcgcgaca gaaaaaaaga cctcaacatt aagagtgctt atctccattt
      601 aatgagcgat gcgctcatct ctgccgggct ggttgtcggc ggcatcatta tcagtttcac
      661 aaactggttt tggcttgacc cagcgctgag ttttatcatt gcctgcacaa tcctgcttag
      721 cacctggaaa ttgttgaaag aaagtttacg cttatcactc gatggcgtcc cggccgacat
      781 gaacctgcag gaagtgaaag atgccgcaaa aaaaattagt gggatactca acattcatca
      841 tgttcattta tggggaatga gcacaacaga aaatgcgctc accgcccata ttgttatcga
      901 tgcaaatgct tctttggaag atgccgaaaa aataaaacac gatttcaaac atgagctgaa
      961 acatatgaat atccagcatg ttactctcga gatagaaagc agcgatgaga aatgtgaaga
     1021 gtgagttgcc agttaccggg ttgccggcga ctggcaacca taaaaaacgc cgccaggaat
     1081 ggcggcgtaa attttcaacc ctaaacctgg acaaacttaa taagtatgtt ttgcatttca
     1141 aaaaaaaagt gagctcttga acgacgaccc gatgggtctt cactacaaag gaccgaacac
     1201 ttcatacaac gtcatcctcg caaaagcggg gatcccattc tacgcagaag aatttacgaa
     1261 taccgaacgt gtaaccaact gatgcccgat ccataaaaga ttctgcactt atttagcaca
     1321 tcgatcggga ataagacatc cgattgggag tcaagttttt tagattggcc attactacga
     1381 aaaccgaaca cttcccgcaa cgtcatcctc gcgcaagcgg ggatcccctt ctacggagaa
     1441 gaatttacaa atgccgaacc ttataaccaa cacatgcccg atcataaaag atctgcactt
     1501 agttgagcac agcacttcag catgacagaa atccttcccg catgaaatat ttttgcacac
     1561 taccttgaaa aattaatttt gataatcgct tcccgaaacc tttaccttta cgccacgctt
     1621 cagccgtata tacataattt tccgcgacaa taaccggttt cattcgtgtg aacaatgtac
     1681 gttgtgactg ggcagagttt gga
//
LOCUS       DASQJI010000235         3294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_331403,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000235 DASQJI010000000
VERSION     DASQJI010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331403"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="VEV83_06770"
     CDS             <1..856
                     /locus_tag="VEV83_06770"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HYK44850.1"
                     /translation="FVTVKGGKVWYRIMGSGNKPPLLLLHGGPGSTSYYLNPLESIAK
                     DRPVIFFDQLGCGRSTHITDTSLMTIDNYVEQIEALKNTLGIKQYYLYGHSWGTMLGI
                     DYYLKHPQGIKAIIFGSPLFSTDLWISDADTLIMSLPDSIQQIINVSKKNNNYSSVEY
                     QKAIHAYSQNFTRRTNNYPADVDSTSKTFGDNVYQYMWGPSEFEATGTLKNYNRMADL
                     QKINIPVLLTAGEYDEARPSTVKYYQSLIPNAKFVLIVGAGHVTMMDNTGDNNKAIVD
                     FLNKMDQQ"
     gene            1103..>3294
                     /locus_tag="VEV83_06775"
     CDS             1103..>3294
                     /locus_tag="VEV83_06775"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK44851.1"
                     /translation="MRNRFHAFPCTIVLSLVLSAASSQNIAFTPVELPDENLSGIITC
                     ITQDQRGNIWFTCNNSGLFEYDGIRLKSYMHDPLNPHSLANNVLECVYVDNDGYVWVG
                     TYGDGLEKLDTKTGIFTDYKHDDKNPYSISGDTVTCILQDHEGTLWIGNDYTGLDRFD
                     KKTGKFFHYKHKNNDTTSLSFDQVRALYEDREGTLWIGTGAGFGGDENPDNKGGLNRF
                     NKSTGTFTQYLHNDKDPHSLIDNRVRAIYEDTYGNFWVGTSGDGLHTLNRATGKFTRY
                     TYDPKHPERLSRPPVSTAISYDHITFITEDATRKIWIGTLTEGLTRYDPISKKIDRYK
                     LHGTNFNNANDSTAWWAFTSSEGEMWISNFGAHMLRFDPFLQNISQDSSKGSLQSFFQ
                     ESDSIEWIGTDGKGLARLDKKNNTIKWFVHDPKKSGTISSSNNVFTIYKDKENRLWVA
                     TDSGLNLFHPGKEIFSHYLYDPRIKTSISNNFVLPIYEDEKNDLWIGTALGLDKMNPS
                     TGEFTHYKIYPQDSIVGGKNLVTCIAEDNNENLWTGNWSGGGVNLFDSKTHRFKNYLR
                     GQSILGLCVTDNGILWAGSNINGVFRYDNALDSFHLVVDSANGDALAVVSMVKDHNDV
                     WAGGPNGIFRIDGKTNAVARFSKSFGVNLPLNFLAAFKSEEGALIFGNTLGFYSFFPN
                     KLLANNKPPQIVLTDFRTNNQQVQTGENNIFRDAAAIKSIKLNHNQNA"
BASE COUNT         1053 a          659 c          693 g          889 t
ORIGIN      
        1 gtttgttaca gtaaaaggcg gtaaagtttg gtacaggatc atgggtagcg gtaacaaacc
       61 gccattgctt ttattgcacg gtgggccggg ttctacaagc tattatctca atcccctcga
      121 aagtattgca aaagacaggc cggtcatttt ctttgaccag ttgggttgcg ggcgttcaac
      181 acacataaca gacacttcgt tgatgacgat cgacaattat gtggagcaaa ttgaagcact
      241 taaaaatacg ctgggtatta aacagtacta tttgtacgga cattcctggg gaacgatgct
      301 tggaattgat tactacttaa aacatcccca gggcataaaa gctattattt tcggcagccc
      361 actgttcagt actgatctat ggatcagcga tgcggatacg cttatcatgt cattacccga
      421 ttccattcaa cagatcatca atgttagcaa aaagaataat aattactcgt ctgtagaata
      481 tcaaaaagcc atacacgcat attctcaaaa tttcacccgc agaacgaaca attatcctgc
      541 agatgttgac agcacctcaa aaacattcgg cgataatgtg tatcaatata tgtggggtcc
      601 aagtgaattc gaggcaaccg gaacacttaa aaactataac aggatggcgg acctgcaaaa
      661 gataaacata ccagtactac ttacagcagg agaatatgat gaagcgagac cttccaccgt
      721 aaaatattat caaagtttga taccaaatgc taagttcgtt ctcattgtag gagcaggtca
      781 tgttaccatg atggataata ctggagataa caacaaggcg attgtggatt ttttaaataa
      841 aatggatcaa cagtaagaaa tacttgtcgc ttccgagaca aggcgccgct ttccttatta
      901 gttgcttaaa cgtttcactt ttatcaaaac acaaggattt tttgtttata cactttcagt
      961 tcatgctcac atcatatggc aaaattgttc tttaaaatgc ctgcagcgcg aattcttttc
     1021 ctatatttcc atcgcattac tcgaagtctt acctgctcct gcgaattaca cagaatcgct
     1081 ttaactgtaa aacaaactgc aaatgagaaa tcgttttcac gccttcccct gcacaattgt
     1141 attgtcgctg gtattgtctg cggcatcatc tcaaaacatt gcattcacgc ctgttgaatt
     1201 gcctgacgaa aatctttcag gtattattac ctgcatcacc caggaccagc gtggcaacat
     1261 atggtttacc tgtaataaca gcgggctttt tgaatatgac ggtattcgtt tgaaatccta
     1321 catgcatgat cctttaaatc ctcattcttt agcgaataac gttctggaat gtgtatacgt
     1381 tgataacgac ggatatgtat gggtaggaac ctacggcgat ggccttgaaa aactggatac
     1441 taaaacgggg atctttaccg actataaaca tgatgataaa aatccttaca gcatcagcgg
     1501 cgatacagtt acttgtatct tacaagatca tgaaggcact ttgtggatag gaaacgatta
     1561 tacaggatta gatcgctttg ataaaaagac aggaaaattc tttcattaca agcataaaaa
     1621 taatgataca acgagtttaa gttttgacca ggtcagagcc ctttacgaag acagggaagg
     1681 aacgctgtgg attggcacgg gcgctggatt tgggggcgat gaaaatcctg acaataaagg
     1741 gggccttaac cgttttaata aaagcaccgg cacctttacc caatacctcc acaatgataa
     1801 agacccgcat tctttaattg ataacagggt aagggcaatt tatgaagata cttacggcaa
     1861 tttttgggta ggtacttcag gagatggttt gcacactttg aacagggcga caggaaaatt
     1921 tacacgctat acgtacgacc cgaaacatcc ggaaagatta agtcgcccgc ctgtatctac
     1981 ggcaatttct tatgatcaca tcacatttat tacggaagac gcgacccgca aaatatggat
     2041 aggcacgttg acagaaggat taacgcgtta tgatccgatc agcaaaaaaa ttgaccgtta
     2101 taaactacac ggcaccaatt ttaataatgc caatgattca accgcatggt gggcattcac
     2161 ttccagtgaa ggggaaatgt ggataagcaa cttcggggcc cacatgctca ggttcgatcc
     2221 ttttcttcaa aatatatcac aggacagctc aaaaggttct ttgcaatcgt tttttcaaga
     2281 atcggacagt atcgaatgga taggcaccga tggaaaaggg cttgcacgac ttgataaaaa
     2341 aaataatacc ataaaatggt ttgtgcatga ccctaaaaaa tccggcacga tcagcagcag
     2401 caataatgta tttacgatat ataaagacaa agaaaaccgg ctttgggtag caacagatag
     2461 tgggttgaat ttatttcatc cggggaaaga aattttcagc cattatctct atgatcccag
     2521 gatcaaaacg agcatcagca acaatttcgt cctaccgatt tatgaggacg aaaaaaatga
     2581 tctttggatt ggaacagcgc tcggcttaga caaaatgaac ccgtcaaccg gagaattcac
     2641 ccattataaa atttatcccc aagacagtat cgtcggtgga aaaaacctgg tgacttgtat
     2701 agcagaagac aacaatgaga atttgtggac agggaactgg tctggtggtg gcgtgaattt
     2761 gttcgacagc aaaacacacc ggtttaaaaa ctatttgcga gggcaatcga tcttgggttt
     2821 atgcgtaaca gataatggaa tattatgggc tggcagtaat attaacggtg ttttccggta
     2881 cgacaatgct ttggacagtt ttcatcttgt tgttgattcc gcaaacggtg atgctctggc
     2941 agtagtttca atggtaaaag accataatga tgtttgggca ggaggaccaa atggtatttt
     3001 tagaattgac ggtaaaacca atgcggttgc aaggttcagc aaaagttttg gagtgaactt
     3061 gcccttaaac tttctcgctg cttttaaaag cgaagaaggt gcgctgatat ttggcaacac
     3121 cctcggcttt tattcgtttt tcccaaacaa gctacttgca aataataaac cgccgcagat
     3181 tgtgctcact gatttcagaa cgaataatca gcaggtacaa acgggcgaaa acaatatctt
     3241 tcgagacgcc gctgcaataa aaagcattaa actgaatcac aaccaaaacg cgtt
//
LOCUS       DASQJI010000236         4260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_23995,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000236 DASQJI010000000
VERSION     DASQJI010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23995"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VEV83_06780"
     CDS             complement(<1..294)
                     /locus_tag="VEV83_06780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44852.1"
                     /translation="MKKMSIVLFSVIVALSASAQKIVARPVVHAVPRVVYVYHPYWHP
                     YWYPSYGLGYSWYYGHPAYYYHHPTKLEKQIEDIENEYADRISSVRADDSLSGH"
     gene            578..2080
                     /locus_tag="VEV83_06785"
     CDS             578..2080
                     /locus_tag="VEV83_06785"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK44853.1"
                     /translation="MILIVAVAAARLLMAFLIPLGNDESYYWVYSQHLKANYFDHPPM
                     VALWIRATTLNLLLQDYAGFIRLGSVISCCLATWFMFKCVAVLINERAGWFAACLYNA
                     FFYAGVTAGIFAMPDAPEMLFWTWSMYLVVRITQNESKWKYWLLFGVASGLCIMSKLH
                     GLFIWIGLGGYLLFYKRTWLANPKLYAALLIAIVICLPVLFWNIHYNFMTWKFNGPRI
                     EFQNAAINWHYFFDEISAQLFKNNPLNVAIIVIALFALRRQTILRSPALTIFNFAGLS
                     LALILLIIALHKETLAHWSGPAYIALTPVAAAWLDKRKKENSFQLIRLTLGMHLFVLF
                     YCATFINYYPGTYGVRSGRFIGIGDKSLDLFGWNTAGKKFDSIYADLEQKKIIPPNTP
                     VVGYRWWDSHIEYYFCRPSNIKMIGLGDVMDLHEYVWMNRLRKDSVNMQQAFCIIPSD
                     GFYNVRRVYANYYSHVDSVTNIKTYRVNEPAHNFYVYHLSGWKGNMPMEQ"
     gene            2242..2940
                     /locus_tag="VEV83_06790"
     CDS             2242..2940
                     /locus_tag="VEV83_06790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44854.1"
                     /translation="MHALKRLGLSLAPALLLHCSNAQTNQWTVKTGESIQEVLGDSTI
                     YRYPQFVDGRVYYDDGKVSRGLLNFDRLTGQMEFIAPSRDTLAIANEATVKYIAVQND
                     TFYFDKVYLELIHHNAGTRIGKMDVIKLLDIKKEGAFGQMNSTSSITSTSSFYNGRQD
                     YQLTQKGEITLKEQTKYFISHGNDDFLPATKKNINKIFSQKMSAIEPFMKEKNIDISK
                     QEDLVRLIDFLEKP"
     gene            3277..>4260
                     /locus_tag="VEV83_06795"
     CDS             3277..>4260
                     /locus_tag="VEV83_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HYK44855.1"
                     /translation="MKKIRILSVDGGGIRGIIPGTILAQLEKMLQELSGDSNRKLADC
                     FDMIAGTSTGGILSCLYLTPGENGAPKFTAMEALNLYLQKGHKIFDRTLVEKILSGGG
                     IIHEKYSEDPIYDLLTEYFGDETIDHFIKPSLITAYDITDRKAIFFTSADARRNDMYN
                     FYIRDAARATSAAPTYFSPAHIQSMNGQLYTLVDGGMFANNPALCAYAEARKTEFSKL
                     LNDPEKIDKPTAKDMIIVSLGTGSVRKRYHYGDFKSAGQMKWLEPVIDILMSSNSETV
                     AYQLTQMYLTLEPEFQTNYYRLEPDLKEACSEMDIATEENVANLYQAGLTYV"
BASE COUNT         1218 a          946 c          947 g         1149 t
ORIGIN      
        1 atgaccagat aaactatcat ccgctcttac agaactgatc cggtcggcgt attcgttttc
       61 aatatcctct atctgctttt caagctttgt gggatgatgg tagtaatatg cgggatggcc
      121 ataataccat gagtatccaa gcccataact cggataccag tatgggtgcc agtacgggtg
      181 ataaacataa accacgcgcg gaactgcatg cactaccggt cgagccacaa tcttctgtgc
      241 agaagcgctt aaagcaacga taactgaaaa caatacaatt gacatctttt tcataattga
      301 ttgttttttg tttacggcat ttagacgaat tgacgagaac aggattaaag cgccgttcat
      361 ttgtaacaca atgctaacac tcgttaaaaa gttacaaaag acgcgcatgt attacgcctt
      421 ttcttgcccc gttagagtaa tcgcaaatgc tcaatgaagg catacgcgtt aacaaaaacg
      481 cgacggatcg catcagttgt ttagaactaa atttaatttg cattgcatca tatccacagt
      541 aatgctgtct gcccactggt cgtgtaaaaa aaaggttttg atcctcatcg tcgcggtcgc
      601 tgctgcgcga ttgctgatgg cgttccttat ccctttgggc aacgatgagt cgtattattg
      661 ggtatacagc cagcatttaa aagcaaacta cttcgatcat cctcctatgg tcgcgttatg
      721 gataagagca acaacgttga accttttatt gcaggactac gccggcttca taagactggg
      781 gagcgtgatc agttgttgcc ttgctacgtg gttcatgttc aaatgcgtcg ctgttttgat
      841 caacgaacgg gcaggctggt ttgcggcttg cctgtataac gctttctttt atgccggtgt
      901 tacggcagga atctttgcaa tgcccgatgc gccggaaatg ttattctgga cctggagcat
      961 gtacctggtc gttcgcataa cacaaaatga aagcaaatgg aaatactggc tgctgtttgg
     1021 tgttgccagc ggtctttgta tcatgagcaa actgcacgga ttatttattt ggatcggttt
     1081 aggcggttac ctgttattct ataaaagaac atggttggca aatccaaaac tgtacgccgc
     1141 cctgcttatc gccatcgtga tctgcttgcc agttctgttt tggaacatac actacaactt
     1201 catgacctgg aagttcaatg gcccgcggat cgaatttcaa aatgcagcga tcaactggca
     1261 ttattttttt gacgagatct ccgcacagct tttcaagaac aatccgctga acgtcgcaat
     1321 aatagtgatc gctttattcg ccttgcgaag acaaactatc ctccgttctc ccgcattaac
     1381 tattttcaat tttgccggtc tctcgctcgc tttgatcctg ctcataattg cgttacacaa
     1441 agaaacactt gcacactgga gtggccccgc atacattgcg ttaacgccgg tggctgcagc
     1501 atggctcgac aaaagaaaaa aggagaattc atttcagcta atccgcctga ctttagggat
     1561 gcacctcttc gtgctgttct attgtgcgac attcattaac tattacccgg gaacatatgg
     1621 cgttcggtcc ggccgcttta ttgggatcgg agataagagc cttgacttgt tcggatggaa
     1681 tactgccggg aaaaaatttg acagtatcta tgctgatctt gaacaaaaaa aaattatacc
     1741 ccctaacaca ccggtcgtcg gataccggtg gtgggattca cacattgaat attatttctg
     1801 ccgcccttcg aatatcaaaa tgatcggcct tggagacgtg atggacctgc acgaatatgt
     1861 ttggatgaac cggttgcgta aagactcagt gaatatgcag caggcctttt gtattattcc
     1921 atctgatggg ttttataacg taaggagagt gtacgcaaat tattactcgc acgtggatag
     1981 tgttaccaat atcaaaacgt atcgtgtgaa tgaaccggcg cacaattttt atgtatacca
     2041 cttatcgggg tggaagggaa atatgccgat ggagcaatga tcactcctgc tgttgttgcc
     2101 ggtccatttg tttgatcgcc tttgcttctt tttggagaag aaaattttct actcgctgca
     2161 tgtttaatcc ggtttcggaa gtttaatgag caaactcgcc gcatatcgat taaatttatt
     2221 gaacgcaaaa atccattcgc aatgcatgca ttaaaacgat tgggtctgtc tctggctcct
     2281 gcgctgcttt tacactgcag caatgcacaa acaaatcagt ggaccgtgaa aacaggcgaa
     2341 agcatccagg aagttttggg cgacagcacg atttaccgct atccgcagtt cgtggatgga
     2401 agagtttact acgacgacgg aaaggtgtcc cgcggcctgt tgaattttga ccggcttacc
     2461 ggccagatgg aattcatcgc tccctccaga gatacgctgg ctattgctaa tgaagccacc
     2521 gtcaagtata tcgcggtgca aaacgatact ttttacttcg acaaggttta cctcgaactc
     2581 atacaccaca acgcaggcac caggataggc aaaatggacg tgataaaact gctggacata
     2641 aaaaaggagg gtgcttttgg ccaaatgaat tccacttcat caataacgtc gacaagttct
     2701 ttttacaatg ggcggcagga ctatcagctc acccaaaagg gggagatcac tttgaaagaa
     2761 caaacaaaat atttcatcag ccatggcaac gatgatttcc ttcctgctac gaaaaaaaac
     2821 atcaacaaaa tattcagtca gaaaatgtct gcgatcgagc cttttatgaa agagaagaac
     2881 attgacattt caaagcagga agacctcgtc aggctaattg attttttgga aaaaccatga
     2941 tcggctagaa gatagcgact ggcttaaaaa acaaaaaacc gcttattggg aaatactact
     3001 ccttcataag cggttacatg cgaactcaaa taggaacatt ggatctcaaa acaacatcct
     3061 tttatcgcag ctttccatca gcaaaaacgt tgccacaaga gcgtcgcacg tgacgatccg
     3121 cggactttct atcaacaatt tgttaaccgc tgctgtagtt ttaatggcca tgggacatca
     3181 atcatctcgc tttttcttta tcgcatgcaa ccggcagcaa atacgcgaaa attttttttc
     3241 tttaagcgac ttgtttaagt ttataaaaaa tacctgatga aaaaaatacg aatcctttcc
     3301 gtggatggcg gcggcattcg cgggataatt cctgggacca tattggcgca gttggaaaag
     3361 atgttacagg agcttagtgg cgacagcaac cgcaaactcg ccgattgctt tgacatgata
     3421 gcgggcacca gcacaggtgg tattttatct tgtttgtatt tgacgcccgg cgaaaacggt
     3481 gcgcccaaat ttacggctat ggaggccctt aacctgtatc tgcaaaaggg acataagatc
     3541 ttcgacagaa cgctggtgga gaaaatatta agcggagggg gcatcataca tgaaaaatat
     3601 tctgaagacc caatatatga tctgctcacc gaatattttg gagacgaaac gatcgatcac
     3661 tttatcaagc caagtcttat tactgcctat gatatcaccg accgtaaggc gatatttttt
     3721 accagtgctg atgcgcgccg caacgacatg tataacttct acatacgaga tgcagcgaga
     3781 gctacatcag cggcgccgac ctatttttct ccggcacata tacaatcaat gaacgggcaa
     3841 ctgtatacgc tcgttgacgg cggcatgttt gctaataacc ctgcgttatg cgcttacgcc
     3901 gaagcaagaa aaacagaatt ttcgaagctg ctgaacgatc cggaaaaaat tgataaacct
     3961 actgcaaagg atatgatcat cgtatcgctg ggaacaggct ctgttagaaa aagatatcac
     4021 tatggcgact ttaaaagtgc gggccagatg aaatggcttg aaccggttat tgacatactt
     4081 atgtcgagta actctgaaac ggtcgcgtac cagctaacgc agatgtacct cactttagag
     4141 ccggaatttc aaactaacta ttaccgcctc gagcccgact taaaagaagc atgttcggaa
     4201 atggatatag caacggagga aaacgtagcc aatctttacc aggctggctt aacgtacgtg
//
LOCUS       DASQJI010000237         4091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_484587,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000237 DASQJI010000000
VERSION     DASQJI010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484587"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VEV83_06800"
     CDS             <1..886
                     /locus_tag="VEV83_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK44856.1"
                     /translation="TGYESALTYNSCYAANYGVLTDLLTSCDVAILDTYVHASIIDGC
                     AHTNKIFFAHNDVPSLRLALAKASQYKNKLVIVDGVYSMDGDIAPLPAILSVAKENKA
                     WVMVDESHAIGVIGDDAAGTHDHFDMEERADIISCSLGKALGGIGGFIAGSKHLISFL
                     ELTSRPFMFSTSIPPGIAAQLIRAMDLVRDDPSIHEKLWHNIDHFTSGIKRIGFDLHG
                     SASAIIPLIIPNEAKLLNFCAQLYDDGVLVNPIFFPVVPKRKSRVRISITAALNKSEL
                     DFALAKIEDAAHRTAILK"
     gene            complement(901..1374)
                     /locus_tag="VEV83_06805"
     CDS             complement(901..1374)
                     /locus_tag="VEV83_06805"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK44857.1"
                     /translation="MRIIFVSLLTITLIGLSSFGVATTSTINGNTIEDSLEADRMKYM
                     NEVLASIKGKEKLPADSVFKNLKVIRGISAEHLLWMMNWGWSAELGVSCSHCHVIGKW
                     ESDSLETKEITRGMWNMRQTINGQILPSITGKSYQNNPAVSCITCHRGAPVPTAK"
     gene            1693..1902
                     /locus_tag="VEV83_06810"
     CDS             1693..1902
                     /locus_tag="VEV83_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44858.1"
                     /translation="MKNVLKRHGRYAMSFAGGYFNDVKDILKLARVAPSRNEKLKYFL
                     IGGLDILLTISFVVLAILFFKYFQF"
     gene            2019..>4091
                     /locus_tag="VEV83_06815"
     CDS             2019..>4091
                     /locus_tag="VEV83_06815"
                     /inference="COORDINATES: protein motif:HMM:NF028442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HYK44859.1"
                     /translation="MLRRTFIKRTGAAGLIGFIAPQNILPTAQHRSEFNLESLFQDPP
                     ASAFPQVFWFWMNGNISSEGITRDLEAMKEAGIGGVFNFDVGTGVPKGPIAYASAEWI
                     GLKRFAMSEAERLGLEFTMHNCPGWSASGGPWITPELSMQEITWSEIYVGGSKQINTT
                     LPKPLNRFNYYNDLVVLAFPSLEGEALLQTMKVTANGGAVDIRKVTGEDEQGVLTIVN
                     ERNQTADLEFEFEAPVEVRTLTFFIAAPNSERRQPLLTEYSERTSVNLEASDNGVTFR
                     HVTSINTGVEADLLTGDKFIVYDVPITKAKYFRLTSAKARMYKQVRFSGITRLENWME
                     KTNSRATTIVYVEKASGMFQHDQRDIPAASIIDADAVVILSDYVNENGVLNWNAPPGD
                     WTIMRIGFTSNGRLIRSAPDGGIGLECDKYNPAAMDLHFSKMTEKLSSSIGTLAAKGR
                     MGFEIDSYEAGTQNWTRGFEKMFQSRWRYDLLKYLPAIAGGHVVGSADVTERFLWDFR
                     RLQADLIASNYYGRFNELCHQHGITSYIEPYDQGPMEEMQIGSKVDVNLGEFWNGIST
                     TFPYKAPVRRTLRLAASIAHNNNQKIVGAESFTAEPDASRWAEYPFALKAVGDKAFVK
                     GVNKMVIHRYAHQPNSSVVPGMTMGPWGIHFERTNTWWEQSKPWLQYLSRCQSVLQEG
                     HAIADLLYF"
BASE COUNT         1125 a          883 c          946 g         1137 t
ORIGIN      
        1 tacaggatat gaatcggcgc ttacttacaa ttcatgttat gcagcaaatt acggggtgct
       61 tacagacttg ctaacatctt gcgacgtagc gatcctcgac acgtatgttc atgcgagcat
      121 catcgatggg tgcgctcata caaacaaaat atttttcgca cataatgatg tgccatctct
      181 caggctcgcg ctggcaaagg catcgcaata caaaaacaag cttgtgatcg ttgacggtgt
      241 ttattcaatg gatggtgata ttgcaccatt gcctgccatc ttatcggttg caaaagaaaa
      301 taaagcctgg gtgatggtgg atgaatctca tgcgatcggc gtaattggag atgacgctgc
      361 gggcacacac gatcattttg atatggaaga gcgggctgac atcatttcgt gttctttggg
      421 aaaggcgctc gggggtatcg gcggctttat agctggttcg aagcacctaa taagttttct
      481 tgaattaacg agccggcctt ttatgttttc aacttccatt ccacccggta ttgcagcgca
      541 gcttattcgc gcgatggatc tcgttcgcga tgacccatca atacatgaaa aattatggca
      601 taacatcgac cattttacga gcgggatcaa gcgcatagga tttgacctgc acggatcagc
      661 aagtgcgatt ataccattga tcataccgaa tgaagcgaag cttttaaatt tttgcgctca
      721 gctttacgac gatggagttc tcgttaaccc gatatttttt ccggtggttc caaaacgaaa
      781 atctcgtgta cgaatttcaa taacagcagc attgaataaa agcgaactgg acttcgcgct
      841 tgcgaaaatc gaagacgctg ctcatcgcac tgcgatcctg aaataaaatt ctcctggttt
      901 ttatttagca gttggaaccg gagctcctct atggcaggtg atgcaactta ccgccggatt
      961 attctgataa cttttgccgg tgatagaagg aagaatttga ccgttgatcg tttgccgcat
     1021 attccacatg cctctcgtga tctcttttgt ctccaacgaa tctgattccc acttgccaat
     1081 cacgtgacaa tgcgagcaac tcactcctaa ctctgcgctc catccccaat tcatcatcca
     1141 taaaagatgt tccgcggaaa tgcccctgat cactttcaga tttttgaata cagaatcggc
     1201 gggcagtttt tcttttcctt ttatcgatgc cagtacttcg ttcatgtatt tcattctgtc
     1261 tgcttcgaga ctgtcttcaa ttgtgttccc gttgattgtc gaagtggttg ccacgccaaa
     1321 tgaggataag cctatcagcg ttatcgtgag caacgataca aatatgattc tcataaaaac
     1381 tttatttagc gaacgttcgt tctttaaatg tctaaacttt tttacagccg ctcgtaccat
     1441 tcatcaaatt tgcaatgatt tgtaaacagc ttcgttcttt aataaaaaaa taggcattca
     1501 tatttgtccg gcttcaaaaa aagaatgaaa ttgcctcgct atttgcttaa accccatcca
     1561 ttgtatcagg tgctgttagg ggattgagga aattcaatca tcacattttt taaagtcgag
     1621 gttatgaaca gtcatttgct tcagtcaatg atctttagtg ttgtagtatt cggttgcatg
     1681 aacgcttttt ttatgaagaa cgttttaaaa cgtcatggtc gctatgcaat gtcgttcgcc
     1741 gggggatatt tcaatgatgt aaaagatatt ctgaaactcg cacgtgttgc gcccagtcga
     1801 aatgagaagt tgaaatattt tcttataggc ggattggaca ttcttctcac tatatccttt
     1861 gtagtactcg cgatcctctt cttcaaatac tttcagttct aacgggctcg atcaggagct
     1921 gcgagacctg gccatagata ttttatctcc cgctcttttt cttccgagta aagttgttcg
     1981 cgcatttatg tttgaacaaa agttcatact ttccttacat gctaaggcga acattcatta
     2041 aaagaaccgg cgcagcagga ttgatcggtt ttattgctcc tcaaaacatt ttaccaactg
     2101 cacaacatcg gtcagagttc aatttagaaa gcctttttca agatccgcct gcatctgctt
     2161 ttccccaggt attttggttt tggatgaatg gaaatatcag cagcgaaggc atcacccgtg
     2221 acctggaggc aatgaaagaa gccggcattg gcggagtatt caacttcgat gttggcaccg
     2281 gcgtgcctaa agggccgatt gcatatgcca gcgccgaatg gatcgggctg aaacgatttg
     2341 ccatgagtga agcagaacga ttaggattag aattcaccat gcataattgc cccggctggt
     2401 cggcaagcgg agggccgtgg atcacaccgg aattatctat gcaggaaatc acatggagtg
     2461 aaatttatgt gggtggaagc aagcaaataa acacaacgtt gcctaaacct cttaaccggt
     2521 ttaattatta caacgacctg gtcgtgctgg cctttccttc gcttgaaggt gaggcattgc
     2581 tgcaaacaat gaaggttact gcgaacggcg gtgcggttga tataagaaaa gtaacaggcg
     2641 aagatgagca aggcgtattg acaatagtca atgaacggaa tcaaaccgcg gatctagaat
     2701 ttgaatttga agcccctgtt gaggtacgaa cactcacctt ctttattgct gcaccaaaca
     2761 gtgaacgaag gcaaccttta ctcacggaat acagcgaaag aacatcagtc aatctagagg
     2821 catccgataa cggtgttaca tttcgccatg tcacttcaat caataccggc gttgaagccg
     2881 accttttaac aggcgataag tttatcgtgt atgatgtccc cataactaaa gccaaatatt
     2941 ttcggctcac gtcagcgaag gcaaggatgt ataaacaagt tcgtttttcc ggaataactc
     3001 ggttggaaaa ttggatggaa aaaaccaact caagagcaac aacgatcgtg tacgttgaaa
     3061 aagcaagtgg aatgttccag cacgatcagc gtgatattcc tgctgcttca ataattgatg
     3121 ctgatgccgt tgtcattctt tccgattatg taaacgaaaa cggcgtgttg aattggaatg
     3181 cgccgcccgg cgattggacg atcatgcgga tcggcttcac gtcaaacgga agattgatcc
     3241 gttcagctcc ggatggtggg atcggcctcg aatgtgataa atataatcca gcagcgatgg
     3301 acctgcattt tagcaagatg acggaaaaac tttcgtcttc tatcggaacg ctggcggcaa
     3361 aaggaagaat gggatttgag atcgacagtt atgaagcagg cacacaaaac tggacgcgcg
     3421 gtttcgaaaa aatgtttcaa agtcgatggc gctatgatct gctgaaatat ctgccggcaa
     3481 tcgcaggagg acatgtggta ggaagtgcgg acgtcactga acgtttcctt tgggactttc
     3541 gaaggttgca ggccgacctg atcgcttcaa attattatgg ccggtttaat gaactctgcc
     3601 atcaacatgg catcacatca tacattgagc cttatgacca gggcccgatg gaagagatgc
     3661 agatcggttc aaaagtggat gtgaacctgg gggaattctg gaacgggatt tccaccacat
     3721 ttccatataa ggcgcctgtt agaagaacgt tgcgtcttgc tgcttcgatc gctcataaca
     3781 acaatcaaaa gattgtaggc gccgagtcgt ttaccgcgga accggatgca tcacgatggg
     3841 cggaatatcc atttgcttta aaggctgtcg gtgataaagc attcgtgaaa ggcgtcaaca
     3901 aaatggtgat tcaccgttat gctcatcagc caaattcgtc cgtggtaccc gggatgacga
     3961 tgggaccctg gggtattcat tttgaaagaa caaatacatg gtgggagcaa agcaagccat
     4021 ggctgcaata tttgtcccgc tgtcaaagcg tcttacaaga aggacatgca attgcggatc
     4081 tgctttattt c
//
LOCUS       DASQJI010000238         2562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1251910,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000238 DASQJI010000000
VERSION     DASQJI010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251910"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..774
                     /locus_tag="VEV83_06820"
     CDS             88..774
                     /locus_tag="VEV83_06820"
                     /inference="COORDINATES: protein motif:HMM:NF042851.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA family kinase"
                     /protein_id="HYK44860.1"
                     /translation="MVLKTFIKQYTGSSFPALIETGSGTRYVLKMRGAGNGALSLLSE
                     FVANKVASKLKWPVPDVEWVDIPNNFPWVFGTDEFDDIVQRSYGWNLAIEYIPYAIQA
                     DLHSIETAPQNFLNKIYTLDLFFMNVDRTETSGNLLIDDLGKIWIIDHGSLGLFQSTN
                     TTGKELFSNHIFRRMLQTKDLAYDYTLSDNILFSEVIELIPDSIISESGFTKESLHKR
                     IADRMKHLSE"
     gene            851..994
                     /locus_tag="VEV83_06825"
     CDS             851..994
                     /locus_tag="VEV83_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44861.1"
                     /translation="MNEEVEGLIQTGEREHLCALIDQITIAAGMDPKNYGDGEGIADE
                     WRD"
     gene            1358..>2562
                     /locus_tag="VEV83_06830"
     CDS             1358..>2562
                     /locus_tag="VEV83_06830"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYK44862.1"
                     /translation="MHILPVTPADNNSINVLEIIGNASVGGMENYIKNFLVHLPPGQF
                     RISCICPYESAFTQLLRELGVENVFITPVEDDPKWRSIQLAMEVAKLHDIQLLHAHMP
                     KAHVLAGVAGNLLNKPVVATIHGMDVTAHEFGVARAVKSHLITNCQEAYIQALAMGVP
                     AERVNVVSNGIDVNVFKTAANGDKFRKAANIPAAAQLVGFVGRFEYEKGPDLFVYAAQ
                     YIHQYMPDVHFIMVGEGEMQKELTKLGTRFRLQKNLHFVDWCENLAEAYAALDILAHP
                     SRSDGTSLVLLEAMACGKPAAGFSVGGIREIIENRNTGLLAPVGDWEALARRIIQLLE
                     QKPEQLKKMGEAAKARVQKHFNVKRNTLQTAQILRRIALSASHDQQFNLPNGVSSKKL
                     SNGRPQMHV"
BASE COUNT          741 a          516 c          610 g          695 t
ORIGIN      
        1 gagtgctgcg gcatgcctta cagtgtgggg cgcggagaac tctaatgtca gcacatcgcg
       61 aagtcgtgat ccttaggtgc aaaaactatg gtccttaaaa cttttataaa acaatatact
      121 ggtagttcgt ttcctgcctt aatagaaact ggaagcggga caaggtatgt tctcaaaatg
      181 cgaggagccg gaaatggagc attaagcctg ctttctgaat ttgtggctaa taaagttgcc
      241 agtaaattga agtggccagt tcctgatgtg gagtgggttg atattccaaa taatttcccc
      301 tgggtttttg gaactgatga atttgatgac atagtgcaga gaagctacgg gtggaatctt
      361 gcaattgaat atatcccgta tgcaattcaa gccgacttgc attctattga aaccgcacca
      421 caaaattttc ttaataaaat atatacactt gacttgttct ttatgaatgt tgacaggact
      481 gagacgtccg gtaacctcct tatagatgac ctgggtaaaa tatggataat tgatcatggt
      541 tcgttaggtt tatttcagtc aacaaatact acaggaaagg aattattcag caatcatatt
      601 tttcgtcgga tgttgcaaac gaaagatctt gcatacgatt acacgcttag cgacaatatc
      661 ttattctcag aagttatcga gttaattccc gattcaatta tttcagaaag cggttttacg
      721 aaagagagtt tacacaaacg cattgcagac aggatgaagc atctgtctga atagtgatct
      781 cgacttggat aaaaatgcta tttatgcaat attctcttat tgccgtccta tccgtttttc
      841 tcggcataaa gtgaatgaag aagttgaagg cctgatccaa accggagaac gtgaacattt
      901 atgcgcatta atcgaccaaa taacaatagc tgcaggaatg gaccccaaaa attacggaga
      961 cggagagggc attgccgacg aatggagaga ttgataatga gggacggccg tgagttttaa
     1021 aattgaaaac agaagttgtc agtagaatgt tgcgatcggt cgccacacag gatgatcaca
     1081 cgcaccagcc ggtcgtctta ttagaactaa aaagttgcag gtgaatattc tgtctcacaa
     1141 aatctgcgtg atatacggat gattatccgt cgctcgtctc aacactgcaa ttgcaactgt
     1201 ggcatcatta tttctttatc atcagagatc agttttcgag gcgacagttt ttaaagatgg
     1261 cgattctgct ttttatttca tgcaagcagt cgtcaactgc cgtacgttaa taaaggttga
     1321 tgcttgaaaa ctggtcgcta accttattga aaatcacatg cacattttac ctgtgacccc
     1381 tgctgacaat aattctatta acgtgctgga aataattggg aatgccagcg tcggagggat
     1441 ggaaaattat atcaagaatt ttctcgttca tctaccgccc ggccagtttc gcattagttg
     1501 tatctgccct tatgaaagcg ctttcacaca attgctgcgc gagcttggag tggaaaatgt
     1561 tttcataacg cctgtcgaag atgatccaaa atggcgctca attcaattgg caatggaagt
     1621 ggcaaaactg catgacatac aattattgca tgcccacatg ccgaaagcgc atgtacttgc
     1681 cggcgtggcc gggaaccttc ttaataaacc ggttgtggca acgattcatg gcatggatgt
     1741 tacagctcat gagtttggcg ttgcccgggc cgtaaaatct catcttatca caaattgcca
     1801 ggaggcatat atacaggcat tggcaatggg tgtgcctgca gagcgggtaa acgtcgtcag
     1861 caacggcatt gatgtgaatg tttttaaaac agccgcaaac ggagacaagt tcaggaaagc
     1921 cgccaacata ccggcggcag cgcagcttgt tggttttgtc ggtcggttcg agtatgagaa
     1981 aggccctgat ttgttcgttt atgcagctca gtacattcat cagtatatgc cggatgtaca
     2041 ttttataatg gtgggagagg gtgaaatgca gaaggaatta accaaacttg gtacgcggtt
     2101 ccggctacaa aaaaatctgc actttgtcga ctggtgtgag aacctggctg aggcatatgc
     2161 cgctcttgat attcttgctc atccttcgcg tagcgatggc acttcgctcg tgttgttgga
     2221 agcaatggcg tgcggaaagc ctgcagcagg attttctgtt ggcggcattc gggaaattat
     2281 cgaaaacagg aataccggtc tgcttgcacc cgttggcgat tgggaagcgc ttgcacggcg
     2341 gatcatacag ttgcttgaac agaaaccgga acaattaaag aaaatgggcg aagcggcaaa
     2401 ggcaagagtt caaaaacatt ttaacgttaa aagaaataca cttcagacgg cgcaaatact
     2461 tcgcaggatc gctttgtccg cttcacacga tcagcaattt aatctgccta acggcgtctc
     2521 atccaaaaag ctgagcaacg gcaggccgca aatgcatgtc ca
//
LOCUS       DASQJI010000239        17368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2327663,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000239 DASQJI010000000
VERSION     DASQJI010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17368
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2327663"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1423)
                     /locus_tag="VEV83_06835"
     CDS             complement(<1..1423)
                     /locus_tag="VEV83_06835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYK44863.1"
                     /translation="MKKIALLIFTCAAAATFAQSKRPLNPSDFYRYVDVSDAHVSPDG
                     KWCLYVVTTVDTEKDKTNADVWMVSWDGKDNVQLTNSKEDESTPRFSPDNKYISFLSS
                     RYPEKDDDKQNDNSQLWLFDRRGGDATRITDVKNDIEDYAWSPDGKKILLVMDDIDYA
                     DTSSTGNRVPYVISRYHFKQDIEGYLDNRKSHLYLLDIATHDIDTLTSGNYNETQPDW
                     SPDGKQIAFVSNHSDDPDKNENDDVFVMEARQGATPRQLTNWPGEDQHPHWSPDGRSI
                     AYLQSSSKENFTMYGEDVLAIIPATGGTPNLISASADKQLYEPRWSKDGKNIITLMED
                     DRQQLVASFNVASEKFSKVASGEKVFLSAELNEATGDWLVNMTDPQTPNELYALEKNG
                     LRRLTHATDSFLAPLQTIRVEGFQSKSSDGNVVSGILYRPADTLPTTKLPLILYIHGG
                     PVGQDDYEYDFYRNILAAGGYAVA"
     gene            complement(1551..3590)
                     /gene="uvrB"
                     /locus_tag="VEV83_06840"
     CDS             complement(1551..3590)
                     /gene="uvrB"
                     /locus_tag="VEV83_06840"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HYK44864.1"
                     /translation="MPFKLVAPYEPNGDQPEAIRQLTEGILNGEHYQTLLGVTGSGKT
                     FTIANVIENVQRPTLVLTHNKTLVAQLYGEFKQFFPDNAVGYFVSYYDYYQPEAYMPV
                     SDVYIEKDLSINEELDKLRLQATSELLSGRRDIIVVASVSCIYGIGNPEDFERGIIRI
                     EKGQTISRQGFLHSLVNSLYNRTQDEFKRGTFRVKGDTIDINLPYVDYGYRVSFFGDE
                     IEDIDTIDVHSNKRMLKVENAAIFPANLYLARKDMLQTILYEIQDEMRMQAEYFKTVG
                     KLIEAQRLKERVEYDVEMIRELGFCNGIENYSRFFDRRQPGTRPFCLLDYFPKDFLCV
                     IDESHQTIPQVEGMYGGDRSRKLILVDYGFRLPSALDNRPLNFHEFENMTGQTIFVSA
                     TPGDYELEKCGGVVVEQVVRPTGLLEPPIEIRPSVNQIDDLLDEIDKRVKKGDRVLVT
                     TLTKRMAEEMDKYLARISVKSRYIHSDVDTLERIEILRQLRLGEIDVLVGVNLLREGL
                     DLPEVSLVAILDADKEGFLRNERSLTQTAGRAARNVDGLVIFYADKMTESMQKTIDET
                     NRRREKQVAYNIEHNIIPTTIKKTKEHVFAQTSVLDIKGFDPKNPYAIQGDEDIVSIT
                     AAEEQQQYKTIPQVEKAINKVKKEMEKAARDLDFMEAARLRDEMFRMQKELESMK"
     gene            3834..4007
                     /locus_tag="VEV83_06845"
     CDS             3834..4007
                     /locus_tag="VEV83_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44865.1"
                     /translation="MKKLLFSAVVLLGAMGICISNFGSTGSQVPAGNHSYILKDTVPT
                     DTTKPKDSTLLLR"
     gene            4156..4812
                     /locus_tag="VEV83_06850"
     CDS             4156..4812
                     /locus_tag="VEV83_06850"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HYK44866.1"
                     /translation="MATSLAQKLKIKEGASLCAINAPSHFKQKLQPLPPGVSISTKTK
                     GCDQIHWFVENRLQMEKELSKILAAMVDGMILWIYYPKGSSKIQTDLARDKGWEALLA
                     HSELQWLSLISFDDTWSAFAVRLKTDADKKKDNKPKPRAIFEYIDVETKTIRLPADFE
                     KLLAKNKAEKKFFESLSFTNRKEYVEWIVTAKREETRNHRMTESIERLSKKWKNPVNR
                     "
     gene            complement(4817..5833)
                     /locus_tag="VEV83_06855"
     CDS             complement(4817..5833)
                     /locus_tag="VEV83_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44867.1"
                     /translation="MKQLVSLCIFIFCIISFAGAQESVAEIRKHATLLAQQEKFGDAI
                     EVLDQGLQQYPNNLDILKDEAYISYLGRDFQRALQVGKDIISRDDADAQSYQILGLVY
                     KAIADFKEGDKMYKSAIKKFPKSGVLYSEYGDMLTQYDNKKGAIVQWEKGIAADPNYS
                     GNYYFAAKYYADEGNIFWSSIYGEIFVNIESLTKRTAEIKTLLLNNYKMMISGKGNVD
                     ALKSNGTDFEKAAASALSDAFETTSSDITPEIITSLRARFIINWTVSGATMYPYRLFD
                     FQLQLMREGLFDAYNQWLFGTIINKDKYDNWVYTHDTEMQDFTQFQRNVMFKMPPEQY
                     YGHQ"
     gene            complement(5836..7068)
                     /locus_tag="VEV83_06860"
     CDS             complement(5836..7068)
                     /locus_tag="VEV83_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HYK44868.1"
                     /translation="MAIVKPFKALRPQAQFAKQVASRPYDVLSSSEAKKEAQGNPYSF
                     LHITKSEIDLPESVDVHSKEVYEKAKENLNAFIKRELLFRENKDCYYVYRLQMNGRSQ
                     TGLVVASSIDDYEHNVIKKHELTRPDKEQDRIDHIKITGAQTGNVFLAYRNNDDVDAI
                     IEKWTTTKSAIYDFCADDGVSHSVWIISDDKIIGEITEIFGNAVGCTYIADGHHRAAS
                     AAKVRQALTGNKSENANYFLTTLFPSNQLEIMDYNRIIRSLNNLSAEEFVNLLATDFV
                     VEETSKAYRPEHLHNFGLYIGGKWYKLTAKDGTYSNDAIGVLDITILQNNILSKYLDI
                     HDQRTDKNIDFVGGIRGLGELEKRVNTGEFVMAFSLYPVSIEQLFDIADSGNTMPPKS
                     TWFEPKLRDGLVTHLIYE"
     gene            complement(7085..8158)
                     /gene="serC"
                     /locus_tag="VEV83_06865"
     CDS             complement(7085..8158)
                     /gene="serC"
                     /locus_tag="VEV83_06865"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HYK44869.1"
                     /translation="MKMYNFNSGPAVVPAEVLQRASDAVLNFDNIGLSILEIGHRSDW
                     FVQVIEEARSLVKEIMKLGDAHEVLFLHGGATTQFMQVPMNLLDTDETAAYCDNGIWG
                     AKAIKEAKLFGQVHVACSSKDKNHTYIPQDLSIPSNSKYLHFTTNNTVEGTQWHHLPE
                     TDTPLIADMSSDIFSREVPFSSFALIYAGAQKNAGAAGVTIVVLKKDMLGKLKRAIPT
                     ILDYRTHIEAKSLLNTPPVFAVYVSLLTLRWIKKEGGLNEMEKRAKERAKLFYQTLDK
                     LPAFVGTVNKDDRSLMNAVFVTKKPEHEKLFLDECKQNGMVGVKGHRSIGGLRVSMYN
                     ALPLSSVQTLCDLMEEFSEKYSN"
     gene            complement(8279..8959)
                     /locus_tag="VEV83_06870"
     CDS             complement(8279..8959)
                     /locus_tag="VEV83_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HYK44870.1"
                     /translation="MKHRNSNITEHFQWKRLLQYFFQGIITIAPIGITLYVVIWLFNV
                     VDNFLPDLLYRMFPGLMTEPDGSIRTIPGVGFLLVVLLVTFIGWVSSSFMVSRMVDVL
                     DKVLEQTPGIKYIYSSVKDFLEAFGGNRKKFDKPVLVSVDATDTWRIGFITQNDVTQF
                     ELTDHFAVYVPLSYALTGVVYFVPKEKVRPLKNLNSAEAMKFAISGGVTHIEEVPVVQ
                     HRPADLPA"
     gene            9201..9815
                     /locus_tag="VEV83_06875"
     CDS             9201..9815
                     /locus_tag="VEV83_06875"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYK44871.1"
                     /translation="MKERIQQKAEELFKRYGIRSVTMDDIAGQLGISKKTIYQFYSDK
                     DALVKDIFKGITDENKKKCMEFRSIAENAIHEQLLSSDAAQEIFINMNSSVLFDLNRF
                     HPAVFAEFEKFKKQFLFNIIRENILRGMKEGLFRKGLDVDIITWLQLEMITGVFHNEE
                     VMNGKTSAAHFEKEVKDFFLHGICTEKGLGLIAKYKQQPQKRSA"
     gene            9812..11209
                     /locus_tag="VEV83_06880"
     CDS             9812..11209
                     /locus_tag="VEV83_06880"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK44872.1"
                     /translation="MKQKAFWFLFLIAFGLRSFAQQAPARHEFSIQQCIDYAAKNNVD
                     IKNAMVDVDIQEQQNRSVASAAYPHINGSFTTQYNPNVTVQTFPNFIAAGTYGVLEAE
                     GVKNGNGEPITTPTDFGVIQAPFGTAWSANAGVSLSQILFDGQVFVGLQARKTAIDFR
                     QKNVEVTHEMIKTNISKIYYQLSISNEQIALLDANIGRAQKLLNDSRELYKNGFAEKL
                     DVDRATVQVANLESQKQAAINSISNGYLGLKLLMGMPLNDTVVLTDSVTDESIQQGSL
                     NDTYDYKDRLEFQYLSLSQKLNEFNVRRYKLSKIPTASLNAAYSKLSQGDNFALSGGT
                     LWFPSSYIGLTVNVPIFSGFMKNANIEEAKLELQKTNNTIDNFKLTIDYQVDLARNTF
                     TNAVIVMNSQRKNMELAEEVYNQTKKKYEIGTASTTDITNTQADLITAQRNYLVALYD
                     AALAKVDYLRAIGKL"
     gene            11228..12385
                     /locus_tag="VEV83_06885"
     CDS             11228..12385
                     /locus_tag="VEV83_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYK44873.1"
                     /translation="MHKTLKIFTWVVAFGLASCGAKKTTDTVTEKKSKLETLKKQQQQ
                     LNGEITALEKEIYKLDPSARPEKPKLVAVSKIILQNFNHYIDLQAKVDANNISYVTPR
                     GQPGLVKAVYVNAGDYVKKGQLLLKLDDAVAKRQIEQLQTQLSYAQDIYNRRNNLWKE
                     NIGTEVELLSAKNNVDQIEKQIDLAKEQWAFTNVYSEKTGIAEEVTIHAGENFSGNPQ
                     AGGYIKLVNNADLKVTAEVPENYLGRVKTGSTVEVTLPDIDKTFNTTVSVSGRVINPN
                     SRSFYIDARIPAGVNARPNQLAEVKILDYSATNVITIPVNTLQTDEKGKFVLVAVNEN
                     GKLYARKKQVVIGELYSDQIEIKSGLAEGDILITNGYENLYDGQLITTSAS"
     gene            12447..16016
                     /locus_tag="VEV83_06890"
     CDS             12447..16016
                     /locus_tag="VEV83_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYK44874.1"
                     /translation="MSALENYSGKFKHFGPTTWSIKNKTSVYLLVIFFSLIGVYQFVS
                     LPKEQFPDIVIPTIYVQTVYVGNSPRDIENLVTKPIEKQIKGITGAKINKTTSTSQQD
                     YSAITVEFDTEVKTDVALQKVKDAIDKAKQDLPTDLTQQPTALEVSFSEFPIMYVNIS
                     GNYDLQRLKKYADNMQDRLEELSQLNRVDEVGAPEREFQINVDRPRMQAAGLTFNDIS
                     NAVAAENRDISGGLLDVGDMKRTLQVRGQFHTAFDIQQVVVKNNQNEPIYLKDIATIK
                     DTLKTSESYARLDGKNVITLNIIKRPGENLIETSDAVKQVVDEMKLQVLPRDVTVVIT
                     GDQSIATRTSFKDLVNSIVIGFVLVLIILMFFMGVTNAFFVALSVPLSMFVAFLFLPL
                     ADLIIGSHVTLNFIVLFALLFGLGIIVDDAIVVIENTHRIFVQAKGKLTSSTSAMMAA
                     GEVFVPVLTGTLTTLAPFFPLLFWPGIIGKFMVYLPAMLIFTLTASLIVAFFINPVFA
                     VDFMNHPEGEKVPKSEIFKKPGFWIATAVGILCDMFGQPFLGNLILFIVILSVLNRYF
                     INDLIHGFQNKVLPSIMRKYETLLRWALAGRKPVWLLVSTFALLIFSFVFFGLRQVPV
                     VFFPQGDPNQIYVYLKLPSGTDVDYTDSITRTLESNVYRVLGVENGRKNPVVESVISN
                     VAIGANDPSSGDPSAHPERGRIQVSFVEFEKRHGVSTGPYLDSIRQVIKGIPGAEISV
                     AQEQGGPPTDPPVSIEIASEDLDELIKTAVSLKNYLDSIQVPGVEELKLNVDITNPEI
                     SLKIDRERANTAGISTAQIGQELRTAVFGSEVSKIKEGEDEYKIQLRNEEPQRKNLTD
                     LLNMKVTFRDFRGNIKTMPISAFVDVDYTNTLGSVKRKGYKRVITLNSNLLRGYTTTE
                     VNQTLAGYIQNFQAKPDNVIISQGGEDVQQQETMAFLGKALVIALMLILFILVLQFNS
                     VSKPVIILTEIIFSIIGVALGFAITKMQVSIVMTGIGIVGLAGIVVKNGILVIEFADE
                     LRKRGLKTREAVIQAGKTRIIPVMLTALAAILALIPLGVGLNINFITLFAELNPHIFF
                     GGDSVVFWKPLAWTIIFGLAFAFFMTLFMVPSMYLISERLRRPMRRMYGGKWISILGI
                     PPLSILFILLIIPVIIMHAVDVARRRKKLSSRTVNEAFIGSWL"
     gene            complement(16097..16417)
                     /locus_tag="VEV83_06895"
     CDS             complement(16097..16417)
                     /locus_tag="VEV83_06895"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HYK44875.1"
                     /translation="MLHCIDRIQLYTLDISFDKFSENFMAVEACLYNFQIMGEAVSQL
                     RDEFKQKEAYIPWSLVKGMRNRLIHEYFRTDIFVVWNTIKNDLPSLKIELAKIASELS
                     REGQ"
     gene            16842..17366
                     /locus_tag="VEV83_06900"
     CDS             16842..17366
                     /locus_tag="VEV83_06900"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK44876.1"
                     /translation="MNQHDIAENLERNYRAFTGLIISLNEEQFLFTKDNKWSAGQQAE
                     HILRSVKAVNLGFTLPRFVLKISFGASNRPSKTFDALVERYKEKLAAGGKSSARYIPK
                     AVAFHQRKNICEHIVRFNESICNKLNSYSEIQLDTYILPHPLLGKLTLREMLYFNIHH
                     VKHHEINVRELLRL"
BASE COUNT         4898 a         3840 c         3759 g         4871 t
ORIGIN      
        1 cagcaaccgc ataaccacca gcggcaagaa tattgcgata aaaatcatat tcataatcgt
       61 cctgcccaac cgggccgccg tggatgtaga ggatcaacgg aagctttgta gtcggcaggg
      121 tatccgcagg ccgatacaaa atgcccgaaa caacattacc atcactactc ttactttgaa
      181 acccttctac tcttatcgtt tgcaaaggag ccaggaaaga atccgttgcg tgggtcagtc
      241 tccgcagccc atttttttca agtgcatata attcatttgg cgtttgcgga tcggtcatgt
      301 tcacaagcca atctcccgtg gcctcgttaa gctctgcact taaaaatact ttttcgccgg
      361 acgcaacttt agaaaatttt tcagacgcga cattaaaaga ggcgaccaat tgttgccggt
      421 cgtcttccat caacgtaata atgtttttgc cgtctttact ccaccgcggc tcgtacaact
      481 gtttgtcggc cgaagcagaa attaagttcg gcgtgccgcc ggttgcagga atgattgcca
      541 gcacatcttc gccatacatc gtgaaatttt ctttgctgct gctttgaaga tatgcgatgg
      601 atcttccatc cggactccag tgtggatgtt ggtcttcacc gggccagttg gtcagttgcc
      661 gcggtgttgc gccttgcctg gcctccataa caaacacgtc atcgttctca tttttatccg
      721 gatcgtctga atgattactg acgaaggcta tttgttttcc atccggactc caatccggtt
      781 gcgtttcgtt gtagttgccc gaagtgaggg tatcaatatc atgggtggca atatcaagta
      841 agtataaatg tgatttacga ttatcaagat acccttcgat atcctgctta aaatgatacc
      901 ggctgatcac atacggaaca cgattgcccg tggatgaagt atccgcataa tctatgtcgt
      961 ccatcaccag caatattttt ttcccatcgg gactccatgc ataatcttca atatcgtttt
     1021 ttacatcggt gatcctggtc gcatctccac cgcgacgatc aaaaagccag agttgcgaat
     1081 tatcattttg tttgtcatca tccttttccg gataacgtga tgacaaaaac gaaatatatt
     1141 tattgtcagg actaaacctt ggcgtgctct catcctcttt ggaatttgtg agctggacat
     1201 tgtctttacc gtcccaactc accatccaca catctgcatt cgttttgtct ttttcggtat
     1261 caactgtggt caccacataa aggcaccact tcccatcagg cgaaacgtgg gcgtcagata
     1321 catcaacata cctataaaaa tcagaaggat taagcggacg ttttgattgt gcgaaagtag
     1381 ccgcagcagc gcaggtgaaa ataagcaacg caatcttttt cataaccagt aaaccgaaat
     1441 ttaatggcaa cgaaaataaa ggattgattt aaatacggcc ggctaaaatc agctcgaaaa
     1501 attgagaggc gttattcgga gctgtcagcc actcccagtg cgagacacag ttacttcatg
     1561 ctctccaatt ctttttgcat gcgaaacatt tcatctctta atctcgctgc ttccatgaaa
     1621 tccaggtctc gtgcagcttt ctccatttct tttttcactt tatttatcgc cttttccact
     1681 tgagggatgg tcttatactg ttgctgctct tctgcggctg tgattgaaac gatgtcttca
     1741 tctccctgga tggcatacgg atttttcgga tcgaatcctt ttatgtccag taccgatgtt
     1801 tgtgcgaaca catgctcttt tgttttctta atagttgtcg gaataatatt atgctcgatg
     1861 ttataagcga cctgcttctc tcttctccga ttagtttcat caatcgtttt ttgcatgctt
     1921 tcggtcatct tatcagcata aaagatcaca agcccatcca cattacgtgc cgcgcgcccg
     1981 gctgtctgcg tgagtgatcg ctcattgcgg agaaaacctt ctttgtctgc atcaagaata
     2041 gcgacaagtg aaacttccgg caggtcaagt ccttcacgca gtaaattcac tcccactaga
     2101 acatcaattt cgccaagccg caactgccgt aaaatttcga tacgttcaag cgtgtccaca
     2161 tcgctgtgga tgtatcgcga tttgacgctg atccgtgcaa gatatttatc catctcctcc
     2221 gccatgcgct ttgtgagtgt ggtcaccagc acgcggtcgc ctttcttcac gcgcttatcg
     2281 atttcatcaa gcaggtcatc gatctggttt acgcttggcc taatttcaat gggaggctcc
     2341 agcaggccgg taggccgcac aacctgttca acaacgacac cgccacattt ttcaagttca
     2401 taatcaccgg gcgttgcgct cacgaagatc gtctggccgg tcatgttttc aaattcgtga
     2461 aaatttaacg gccgattgtc aagagcactg ggtaaccgga atccatagtc aaccaggatg
     2521 agtttgcggc ttctgtcgcc gccatacatg ccctcaacct gcggaatagt ttgatggctt
     2581 tcatcaatca cgcataaaaa atctttcgga aaataatcga gcaaacagaa aggccttgtg
     2641 cctggttgcc ttctgtcgaa aaagcgggaa taattttcga tgccattgca aaagccaagt
     2701 tcccgtatca tttcgacatc atattcaacg cgctccttta accgttgagc ttcgatcagt
     2761 tttccaacgg ttttgaaata ttccgcctgc atgcgcatct catcctgtat ctcatacaaa
     2821 atagtttgca acatatcctt ccgcgcgaga tacaggttgg cggggaagat cgcagcattc
     2881 tccactttga gcatgcgttt gttcgaatgc acatcgatag tatcgatgtc ttcgatctca
     2941 tcaccaaaaa aacttacacg ataaccataa tcgacgtaag gaagattaat gtcaattgta
     3001 tcgcccttca cgcgaaacgt tccgcgctta aattcgtcct gtgttcgatt atacaaactg
     3061 tttacgagtg aatgcaggaa cccctgtctt gatatcgtct gtcctttttc tatgcgtatg
     3121 ataccccttt caaagtcttc gggatttccg ataccataaa tacaactcac gctggcgacg
     3181 acgatgatgt cgcgccggcc ggaaagcaat tcacttgtgg cctgcaatcg aagtttgtca
     3241 agctcttcgt taatgctaag atccttttct atgtacacgt cactgaccgg catataagcc
     3301 tcgggttgat aataatcata gtaggaaaca aaatatccaa cagcattgtc gggaaaaaat
     3361 tgtttgaact caccatacaa ttgtgctacc agcgtcttgt tatgcgttaa caccaaggtc
     3421 ggccgctgca cattttcaat cacgttcgca atcgtaaagg ttttgccgct ccccgttact
     3481 ccgagtaatg tttgataatg ttcgccgttc aaaatcccct ctgttaactg ccggatcgct
     3541 tcgggctggt ctccgttcgg ctcgtatggt gcaactaatt tgaatggcat ggcgctaagt
     3601 taacgcgtaa atttttttta ttttttcaag tgctcatcgt ttaacagaaa ataaaacggg
     3661 aatatgtttt tcaaaagttt tcaactattt agatatattt taagcgggcg acggaaagga
     3721 tggcaatatc atttccaaag gcgatagctt tcgcatgatg agcatttttt aaaaatggca
     3781 aaattgttgc ttacagaaag ccactaaact tttaatcatt aaattttcta accatgaaaa
     3841 agctcctttt ttcagccgtt gtgttattgg gtgcgatggg tatttgcatt tcgaatttcg
     3901 gcagcacagg ttctcaagtt cctgccggta atcacagtta tattctgaaa gacacagtgc
     3961 ccaccgatac taccaaacca aaagattcta ctttgttact caggtaatca ttgaagagtt
     4021 tggtttaatc ccactgacaa agcctttgca ttatcgtgaa ggctttgctc tttttatgag
     4081 aagttgatct gcgcagcctt gttcttcttt aaaagctgcc ttcaacttag tttgtacatt
     4141 agtgcaaaaa gtaaaatggc tacttcgctt gcacaaaaat taaaaataaa agagggtgct
     4201 tcgctctgcg ctatcaatgc accttctcat tttaaacaaa agctgcaacc attacctccg
     4261 ggcgtgagca tatcgacgaa gacaaaaggc tgcgatcaaa tacactggtt tgttgagaac
     4321 aggttgcaga tggaaaaaga gctcagcaaa attttagcag cgatggtgga cggtatgata
     4381 ttgtggatct actatccaaa agggagctca aaaattcaaa ccgatctagc gcgcgacaaa
     4441 ggatgggagg ctttgcttgc tcacagcgaa ttgcaatggc tttcattgat ctcttttgac
     4501 gacacgtggt ctgcttttgc agtgcgcctg aaaacagatg cagataagaa aaaagataac
     4561 aagccaaagc cgcgcgcgat attcgaatat atagatgtcg aaaccaagac aatacgtttg
     4621 ccagcagact tcgaaaagct attagcaaaa aacaaggcgg aaaaaaaatt ttttgaaagc
     4681 ctgtcattca ccaacaggaa ggaatacgtt gaatggatcg tgacagcaaa aagagaagaa
     4741 acaagaaacc accggatgac ggaaagcatc gaacgacttt caaaaaaatg gaagaatccc
     4801 gtcaaccggt gatcggtcat tgatgcccat aatattgttc cggcggcatc ttgaacatta
     4861 cgttacgctg gaactgggta aagtcttgca tttccgtatc atgtgtatac acccaattgt
     4921 cgtatttgtc tttgttgatg atcgttccaa agagccattg attgtatgca tcaaacagac
     4981 cttcgcgcat cagttgcagt tgaaagtcga acaagcgata tggatacatc gttgcgccgg
     5041 aaacagtcca gttaataata aaacgtgcac ggagtgaggt tataatttcg ggcgtgatat
     5101 cagaagaagt tgtttcaaat gcatcagaca atgcagacgc cgctgctttc tcaaaatcag
     5161 ttccattgct tttaagcgcg tcaacgttgc ctttaccgga gatcatcatt ttgtaattgt
     5221 tcagcaacag cgtttttatt tcggctgtgc gtttggtaag gctttctata ttcacgaaga
     5281 tctccccata aatactgctc cagaaaatat tgccttcatc agcataatac tttgcggcga
     5341 aataataatt gccgctatag ttaggatctg ccgcaattcc cttttcccat tgaacgattg
     5401 cgcctttttt attgtcatac tgcgtgagca tgtcaccata ttcgctatac aaaacaccgc
     5461 ttttcggaaa tttctttatt gccgatttgt acatcttgtc tccttcctta aaatctgcga
     5521 tggctttata tactagtcca agtatttggt agctctgcgc atccgcgtca tccctgctga
     5581 ttatgtcttt tcctacctgc aaggcacgtt gaaaatctct tccgagatag cttatataag
     5641 cttcgtcttt tagtatgtca agattgtttg ggtattgctg caacccctgg tcgagtactt
     5701 cgatcgcatc gccaaacttt tcctgttgcg cgagcaatgt tgcatgtttt cgaatttctg
     5761 caacgctttc ctgtgcgccg gcaaacgata tgatacaaaa gatgaatata cacaaactaa
     5821 caagctgctt catgttcatt cgtatatcag gtgagtaact aaaccgtccc gcaacttagg
     5881 ctcaaaccag gtgctttttg gaggcattgt attaccgcta tcagcaatgt caaacagttg
     5941 ttctatgctt accgggtaca agctaaaagc catcacaaat tcaccggtgt tcaccctctt
     6001 ctccaattct ccaagccctc ttatcccgcc gacgaaatcg atattcttat cggtccgctg
     6061 atcatggata tccaggtatt tcgaaaggat attgttttga agtatcgtga tgtcgagcac
     6121 gccgatagca tcgtttgaat atgttccgtc ttttgcggtg agcttatacc atttgccgcc
     6181 gatgtacaaa ccgaagttgt gcagatgttc aggcctgtat gccttacttg tttcctcaac
     6241 aacaaaatct gtggcaagca ggttgacaaa ttcttcggcg ctcaaattgt tcagcgacct
     6301 gatgatacgg ttataatcca ttatctccag ttggttcgat ggaaataagg tggttagaaa
     6361 ataattcgcg ttctcgcttt tgttccccgt taatgcctgg cgaacctttg cggccgatgc
     6421 tgcacgatga tggccgtcgg caatgtaggt acagccaaca gcgtttccaa aaatttccgt
     6481 tatctcgccg atgatcttat cgtcgctgat gatccagacc gaatgagaaa cgccatcgtc
     6541 tgcgcaaaaa tcatagatcg cactttttgt cgttgtccac ttttcgatta ttgcatctac
     6601 gtcgtcattg ttcctgtatg caaggaaaac attgccggtt tgtgcgcccg tgatttttat
     6661 atgatcgatg cggtcttgtt ctttgtctgg tcgcgttagc tcgtgttttt tgatcacgtt
     6721 gtgctcatag tcatcgatgc tgctcgcaac taccaaacct gtttggcttc gtccgttcat
     6781 ttgcagccta tatacataat agcagtcctt attttctctg aataatagtt cccgtttgat
     6841 aaaagcattt agattttctt tcgccttctc atacacctcc ttactgtgaa cgtcaacact
     6901 ttccggtagg tctatttcgc tttttgtaat atgcagaaat gagtatggat tgccctgcgc
     6961 ttcctttttt gcttccgagc tgcttaacac atcgtaaggg cggcttgcaa cttgtttcgc
     7021 aaattgtgcc tgcggacgca acgctttgaa tggttttaca attgccatcg aataagatca
     7081 gagtttagtt agaatatttt tccgaaaatt cttccatcag gtcacaaagc gtttgcacgc
     7141 tgctcaatgg aagtgcgttg tacatagaca cgcgcaagcc accgatgctg cgatgcccct
     7201 tcacacccac catgccgttt tgtttacact catcaagaaa caatttctca tgttccggct
     7261 tcttcgtcac gaagacagca ttcatcaggc ttcggtcgtc cttgttcact gtacccacaa
     7321 aagccggcaa tttatcgagt gtttgataaa ataatttagc ccgctctttc gctctttttt
     7381 ccatctcgtt tagtccgccc tcttttttta tccaccgcaa ggttaaaaga cttacgtata
     7441 cagcaaaaac gggaggagtg ttcaacaagg acttggcttc aatatgcgtt cggtaatcaa
     7501 gaatggttgg aattgctctt tttaattttc ccagcatatc ttttttcaac acgacgatag
     7561 taacacctgc agcacccgca ttcttttgcg cgccggcata gatcagtgca aaactggaaa
     7621 atggaacttc ccgactaaaa atgtcgctgc tcatatccgc aattagcggc gtatccgttt
     7681 ccggaagatg atgccattgc gttccttcga cagtgttgtt tgttgtaaaa tgaagatact
     7741 ttgagttaga tggaatcgaa aggtcttgcg gaatatacgt atggttcttg tcttttgaag
     7801 aacaagccac atgcacttgt ccaaacagtt ttgcttcctt aatcgccttt gcaccccaaa
     7861 tgccgttatc acaatatgcg gccgtttcat cagtatccaa caaattcatc ggcacctgca
     7921 tgaattgcgt tgtcgctcct ccatgcagaa acaatacttc atgtgcatcg ccaagtttca
     7981 ttatctcctt taccaacgat cttgcttctt cgatcacctg cacaaaccag tctgaacgat
     8041 gcccgatctc aaggatcgat agccctatat tgtcaaaatt cagtaccgcg tctgacgcac
     8101 gctgcaaaac ttcagcgggg acaaccgcag gccctgaatt aaaattgtac attttcattt
     8161 gaagtcctta tcgaaggctg caaaataaag ctttactgtt tatataagcg agtctgtgaa
     8221 ttgtatgagt gtaaaagatt agccaaagca tgttgcacca aaacgttcgt tcttcagatc
     8281 atgcaggtag atcagccggc ctgtgctgaa cgacagggac ttcttcaata tgcgtgacgc
     8341 cgcccgatat cgcaaatttc attgcttcgg cactattcaa attttttaaa ggtctgacct
     8401 tttcttttgg aacaaagtaa acaacaccgg taagcgcgta tgacaacggc acgtacacag
     8461 caaaatgatc cgttaattcg aactgcgtaa catcattctg cgtgataaat ccgatgcgcc
     8521 aggtgtctgt ggcatccacg cttacaagta ccggcttatc gaatttcttc ctgttgccgc
     8581 caaaagcctc gaggaaatct tttacagagg agtagatgta ctttattccg ggtgtttgct
     8641 ccagaacctt atcgagtacg tccaccatgc gcgataccat gaaggaggaa gaaacccaac
     8701 cgatgaatgt tacgaggaga acgaccaaca aaaagcccac accgggaata gtccggatgg
     8761 aaccatccgg ctcagtcata agccccggaa acatgcggta cagaaggtcg ggcagaaagt
     8821 tatcaacgac gttaaataac cagatgacca cgtataacgt gatgccgatc ggcgcaatcg
     8881 ttattatgcc ctggaaaaag tattgtaata atctcttcca ctgaaaatgt tcagtgatgt
     8941 tcgaattgcg atgtttcatc tggatgattt ttttgccgca tcggtccgac tgccggaaaa
     9001 tatctgcctg ttcaatggta gagcgcgtcg atcagcccgt atgtgcctgc ttttcttccg
     9061 caaaattcac ttcaaatcaa atatgttccg ttttgagacc gtaaaaactt tcaccgcgcc
     9121 tttcgtaaaa taatttatct cggaaacttc tgttacaaaa aaagtttcca tagttttgcg
     9181 gccgctttta aagcaagaac atgaaggaga gaatacagca aaaagccgaa gagctattca
     9241 agcgttatgg cattcgtagt gtgacgatgg atgatatcgc cggccagctc ggtatttcga
     9301 agaagacaat ttaccagttc tattcggata aagacgctct tgtaaaagac atttttaaag
     9361 ggatcactga cgagaataag aaaaaatgca tggagttcag gagcattgct gaaaatgcga
     9421 tccacgagca attgctttcg agcgatgctg cacaggagat ctttatcaat atgaattcct
     9481 ctgtcctgtt cgatctgaac cgctttcacc ccgccgtttt tgcggagttt gaaaaattta
     9541 aaaagcaatt cctttttaat atcattcgcg aaaacatttt aagaggaatg aaagaagggc
     9601 tattcaggaa aggtttggat gttgatataa ttacttggct gcagctcgaa atgatcaccg
     9661 gtgtttttca taatgaagaa gtaatgaacg gcaaaaccag tgctgcccat tttgaaaaag
     9721 aggtgaaaga ttttttcctt cacggaatat gtactgaaaa agggttggga ttaattgcga
     9781 aatacaaaca acaaccacaa aaaagatccg catgaagcaa aaagcatttt ggtttttatt
     9841 tcttatagcg tttggattgc ggtcattcgc gcagcaggca ccggccaggc atgaattttc
     9901 cattcagcag tgcatcgact atgctgccaa aaacaatgtt gacatcaaaa atgctatggt
     9961 tgatgttgac atacaggaac agcaaaaccg ttcagtggca tcagcagcct atccgcacat
    10021 caacggcagt tttactaccc agtataatcc gaatgtcacg gttcaaacat ttccaaattt
    10081 cattgctgca ggtacgtatg gtgtgttgga agccgaaggg gttaagaacg gaaatgggga
    10141 gcccataaca actccaacgg attttggcgt gatccaggcg ccattcggaa ctgcatggag
    10201 tgcgaatgcc ggcgtttctt tatcgcagat attgttcgac gggcaggtgt tcgttggcct
    10261 gcaggccagg aaaacggcaa ttgatttcag gcagaagaat gttgaggtaa cgcatgagat
    10321 gataaaaaca aacatatcaa agatctatta ccagttgtcg ataagcaacg agcagatcgc
    10381 tctgctggat gcaaatattg gaagggcaca gaaattattg aacgatagcc gcgagctgta
    10441 taaaaatggc tttgcggaga agttggatgt ggaccgcgca accgtgcagg tagctaacct
    10501 tgaatctcaa aaacaagcgg cgatcaacag tatttccaac ggttatctcg gactaaaatt
    10561 attaatgggc atgccgctca atgataccgt tgttctcact gattcggtta cagacgagag
    10621 cattcagcaa ggctcactaa atgatacata tgattacaag gaccggttag agtttcagta
    10681 tctctcgtta tctcaaaaac taaatgagtt caatgtcagg agatataaac tgtcgaaaat
    10741 tccgaccgca agtttaaatg ctgcttatag caagctttcg caaggcgata acttcgccct
    10801 gtcaggtgga acgttgtggt ttccgagttc atatattggc ctcacggtga acgttccgat
    10861 cttcagcgga ttcatgaaaa atgcgaacat cgaagaagcg aaactggagc ttcagaaaac
    10921 aaataacacg atcgataact ttaaactgac aatcgactat caagttgatt tggcaaggaa
    10981 caccttcacg aatgctgtta tcgtcatgaa ctcccagcgg aaaaacatgg agcttgcgga
    11041 agaggtatat aatcaaacaa aaaagaaata tgaaatcggc actgcgtcaa caacggacat
    11101 cacaaacacg caggctgacc ttataacagc acaacggaat tatcttgtcg ccctgtatga
    11161 tgctgctttg gcgaaagtag attacctgcg cgcaatcgga aaactataaa gcaataaact
    11221 ctgtgatatg cacaaaacat tgaaaatttt tacgtgggtc gttgcctttg gcctcgcttc
    11281 gtgcggagcg aaaaaaacca cggatactgt gacagaaaaa aaatcgaagc tggaaacact
    11341 caaaaaacag caacagcaat tgaacgggga gatcacagcg cttgagaaag aaatttacaa
    11401 actcgatcct tcagcaagac ccgaaaagcc gaagctggtt gcggtttcaa aaataattct
    11461 tcaaaacttc aaccactaca tcgacctgca agcaaaagtg gacgcaaata atatcagtta
    11521 tgttacccca cgtggacagc caggtttggt aaaagcggtg tatgtgaatg cgggagacta
    11581 tgtaaagaaa ggccagttgc ttttaaagct ggatgatgct gttgctaaaa ggcagatcga
    11641 acagttgcaa acgcagttaa gttacgccca ggatatttat aaccgaagga ataatctttg
    11701 gaaagagaac ataggtacgg aggttgaact tttatctgca aagaacaacg tggaccaaat
    11761 agaaaaacag atcgacctcg caaaagaaca atgggcattc actaacgttt actcggaaaa
    11821 gaccggcatt gccgaagaag ttaccattca cgcgggagaa aacttcagtg ggaacccgca
    11881 ggcagggggc tatattaaac tggtaaacaa tgcagacctg aaggttaccg ccgaggtgcc
    11941 tgaaaattat ttaggccgcg taaagaccgg cagcacagtc gaggtaactc ttcctgacat
    12001 agacaaaact ttcaatacca ctgtgagcgt atcaggccgc gtgataaatc cgaacagccg
    12061 ctctttttat attgatgccc ggatccccgc tggtgtgaat gcacgtccga accagttggc
    12121 ggaggtgaag atccttgact attctgcaac aaatgtgata accattcctg tgaacacatt
    12181 gcaaaccgac gagaagggaa aatttgtact tgtggcggta aacgaaaatg gaaaattata
    12241 tgcacgcaaa aaacaggtgg tgattggaga gttgtacagt gatcagattg agatcaagag
    12301 cgggttggcg gaaggcgaca tactcatcac caatggttat gaaaacctgt acgacgggca
    12361 actgataaca acatcagcca gttaatcgca ctgaaagaga atgtgcaata aacattaaaa
    12421 gaccgtttct taaaacgaaa gttcgtatga gcgcattaga aaattattcc ggcaaattca
    12481 aacattttgg tccaacaacg tggagcataa aaaataaaac gtctgtctat cttcttgtaa
    12541 ttttcttttc gctcatcggt gtttaccagt ttgtctcgtt gccgaaagaa caatttcctg
    12601 acattgttat acctacgatt tatgttcaaa cagtttacgt aggaaattca cccagggaca
    12661 tagagaatct tgttacaaag ccgattgaaa aacaaatcaa gggcataacc ggcgcgaaga
    12721 tcaataaaac cacaagcact tcacagcagg attactccgc cataactgta gaatttgata
    12781 cggaggttaa gaccgacgta gcgcttcaaa aagttaagga cgccattgat aaagcaaaac
    12841 aggacctgcc aaccgatttg acgcaacaac caaccgcgct tgaagtaagt ttttctgagt
    12901 tcccgatcat gtatgtaaac attagcggga actatgacct gcagcggctc aaaaaatatg
    12961 cggataacat gcaggataga ctcgaagagc tttctcagtt aaaccgtgtg gatgaagtag
    13021 gcgcacccga acgggaattt caaatcaatg tcgacaggcc gcgcatgcag gcagcaggcc
    13081 ttactttcaa cgacatttca aacgccgttg cagccgagaa cagagacatt tcgggagggt
    13141 tgctcgatgt gggtgatatg aaaagaacct tacaggtacg cggccagttc cacactgcgt
    13201 tcgatattca gcaagtcgtc gtgaaaaata atcagaacga accaatctac ctgaaagaca
    13261 ttgctacgat caaggacaca ctaaaaacga gtgaaagcta tgcgcgatta gatggcaaga
    13321 acgtaattac cctgaatatt ataaaacggc ccggggaaaa tcttatcgaa acatcagatg
    13381 cagtgaaaca agtcgtcgat gaaatgaaat tacaggtgtt gccacgcgat gttaccgttg
    13441 tgataacagg cgatcagagc atagcgacaa gaacttcttt taaagacctt gtgaattcaa
    13501 tcgtgatcgg gttcgtactt gtacttatca tcctgatgtt ttttatgggt gttacgaacg
    13561 cgttttttgt ggcgctatca gtgccgctaa gcatgttcgt cgcgtttttg ttcttgccgc
    13621 tcgccgacct tatcatcggt tcacacgtaa cactcaactt catcgtgttg ttcgccttat
    13681 tgtttggcct cggtattatc gttgacgatg ctatcgttgt aattgaaaat acgcaccgga
    13741 tctttgtgca ggcgaaaggc aagttaacat cgtccacttc tgcaatgatg gctgcaggcg
    13801 aagtatttgt gcctgtgctg acaggaacgt taacaacgct cgcacctttc ttccctttat
    13861 tattctggcc gggaatcatt gggaaattca tggtgtatct gccggccatg ctgatattca
    13921 cgctcaccgc ttcgctcatc gttgcatttt ttattaaccc ggtatttgcg gtcgacttta
    13981 tgaaccatcc ggaaggagaa aaggttccga agtccgagat attcaaaaag cccggcttct
    14041 ggatcgcgac ggcggttggt attttatgcg acatgtttgg gcagccgttt ttggggaacc
    14101 ttattttgtt cattgttatc ttatcggttc tcaaccggta ttttatcaac gatctaattc
    14161 atggtttcca aaataaggtg cttccctcga tcatgagaaa atatgaaact ttgttgcgat
    14221 gggcactggc tggacgaaaa ccggtgtggc tcttggtaag tacgtttgcc ctcctgatat
    14281 tctctttcgt attttttgga ctaagacaag tgccggtcgt attttttccg cagggggatc
    14341 ctaaccaaat ttatgtgtat ctgaaattgc cttccggaac tgacgttgat tataccgatt
    14401 caataacacg cacgcttgag agcaacgtgt atcgcgtact tggcgtggaa aacggcagga
    14461 agaaccctgt tgtagaaagt gtcatcagca acgtagcgat aggagcaaat gatccaagca
    14521 gtggcgatcc aagtgcacat cctgaacgtg ggcggataca agtgtcattt gttgaattcg
    14581 agaaacgcca cggtgtttca acaggaccat accttgactc aatcaggcag gtcattaaag
    14641 gaattcccgg tgcagaaatt tccgtagcac aggagcaagg tggaccaccc actgacccac
    14701 ctgtatcaat cgagatagcg agtgaggatc tagatgagtt gataaagacc gcggtatctc
    14761 tgaaaaatta tcttgactcg atccaggttc cgggagttga agaactaaaa ttgaatgtcg
    14821 acatcaccaa cccggagatc agtttaaaga tcgatcggga acgcgccaat actgccggaa
    14881 tatcaactgc acaaatcgga caggaattga gaactgcagt ttttggaagt gaggtgtcaa
    14941 aaataaaaga aggtgaagac gaatataaaa ttcaattgcg caacgaagag ccgcagcgga
    15001 aaaatctgac tgatctttta aacatgaaag tgacatttcg ggattttcgg gggaatatta
    15061 aaacgatgcc gatctcggct tttgtagatg tggattatac aaataccctt ggcagtgtaa
    15121 agcgtaaagg ctataagcgc gttatcacgc tcaactcaaa tttgctgcgc gggtacacaa
    15181 ccacggaggt caaccagaca ttagcagggt atatccagaa tttccaggcc aagcccgata
    15241 atgtgatcat ctcacaggga ggtgaagatg tgcagcagca ggagacaatg gcatttcttg
    15301 gtaaagcttt ggttattgct cttatgctca tcctgttcat acttgtattg caatttaact
    15361 ccgtcagtaa gccggttatc atcctgaccg agatcatctt cagcattatc ggtgttgctt
    15421 tgggttttgc aataaccaag atgcaggtat caattgttat gacagggatt ggtatcgttg
    15481 gtctcgccgg tatcgtcgta aagaatggta ttcttgttat tgaatttgcg gatgagctta
    15541 gaaaacgcgg cttgaaaaca agggaagccg tgatacaggc aggtaaaact cgtatcatac
    15601 ccgtaatgct tacggcgttg gcggcgatac ttgcgctgat cccattaggc gtcggattga
    15661 acattaactt cataacgctt ttcgcggagc tgaatcctca tatctttttt ggtggcgaca
    15721 gtgttgtgtt ctggaagccg ctcgcgtgga ccattatctt cggattggcc tttgcatttt
    15781 tcatgacgtt gtttatggtg ccgagcatgt atttgatctc tgagcgctta cgccggccga
    15841 tgcgcagaat gtatggtggt aaatggataa gcatcctggg cattccgccg ttaagtatcc
    15901 tatttatttt actcattatt ccggtcatca ttatgcacgc agtagatgtt gcacgcagac
    15961 ggaaaaaact gagcagtaga acagttaacg aagcattcat cgggagttgg ttgtaaccgg
    16021 ttgcggtgca ggccaggcat tctccgactt tattgattta ctgaatcata tccggtgcca
    16081 atctgaagcg cgctaattat tgtccttcac gggaaagttc agaagcaatt ttcgcaagct
    16141 cgattttcaa ggaaggaagg tcatttttaa ttgtattcca aacgacaaaa atatcagttc
    16201 gaaaatactc gtgaatgagc ctgttacgca tgccttttac taatgaccag ggaatgtagg
    16261 cctccttttg tttaaattcg tcacgcaact gcgagacagc ttctcccatg atttgaaaat
    16321 tatagagaca cgcttcaaca gccataaaat tttcggaaaa tttatcgaac gaaatatcta
    16381 aagtataaag ctggatacga tcgatgcagt gcaggatgtc ttaatgattg aagaaggttt
    16441 ctagacatat actatgtctt tttctacatg cttgcggtat tgcggtttta ttgatcgaag
    16501 gggcacaagt ctttcttcca aatagatctt caatttcgtc ggccattgag ataaaattta
    16561 atcccgtcgg acctattatt tcaactgcga tgtcaatgtc gcggtcttcc ctgcttcacc
    16621 tcttgcatag gatccgaaga cccccagttt tccaatcggg tatttttttt aggtctggca
    16681 agtggtcgcg aagtgtttgc aatattgcat taagagtaag catgtgcaga aaaataattg
    16741 aaattcgatc tcctaagtgt cctgacgtta atgcactatg tgaaaagtct gggactttga
    16801 atgcattttc ttactgacct ttatcctcgc atttaattca catgaaccag catgatattg
    16861 ccgagaatct tgaaagaaac tatcgggcat ttactggatt gataatttct ctgaatgagg
    16921 aacaattttt attcacgaaa gataataaat ggagcgccgg tcaacaggct gaacatattc
    16981 tccgatcggt taaagcggta aaccttggtt tcacgcttcc gcgctttgtt ttgaaaatta
    17041 gctttggagc atctaacagg ccttccaaaa cttttgatgc gctcgtagaa agatacaaag
    17101 agaagctcgc tgccggcgga aaatcatcgg cacgttatat accgaaagct gttgcctttc
    17161 accaaagaaa aaatatttgt gaacacatcg taagatttaa tgaatcgatc tgcaacaaac
    17221 taaatagtta ctcagaaatc cagttagaca catacattct tccgcatcct ttgcttggca
    17281 aactgacctt gcgcgaaatg ctatacttca acatacacca tgtaaaacat cacgagatta
    17341 atgtgcggga attacttagg ttgtgaat
//
LOCUS       DASQJI010000240         1576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_484760,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000240 DASQJI010000000
VERSION     DASQJI010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484760"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="VEV83_06905"
     CDS             <1..789
                     /locus_tag="VEV83_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HYK44877.1"
                     /translation="SQSGETADTLVAIETAKEQGAIILGVVNVVGSSIARKSHAGAYT
                     HAGPEIGVASTKAFTAQLAVLTMIALKIGRAKGTINEERYFNLCRELVDIPEKVELVL
                     QQGETVKQLAEKYKDAYDFLYLGRGYNFPVALEGALKLKEISYIHAEGYPAAEMKHGP
                     IALVDEHLPVVFVATQDSYHHKVVSNMQEIKARKGKVISIITEGDTVSPPLSDDVIVL
                     PPADEIVAPMLSVIPLQLLAYYIGVAKGCDVDKPRNLAKSVTVE"
     gene            984..>1576
                     /locus_tag="VEV83_06910"
     CDS             984..>1576
                     /locus_tag="VEV83_06910"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK44878.1"
                     /translation="MKKVSFLTGWFVCICFQLSAQTFQSKHFTIQKLAHGVYAAIATN
                     GGYAICNAGIVDLGDATLIFDPFMTPEAADDLKKAAEQLTGHAVKYVVNSHFHNDHIG
                     GDQVFTGAALISTTRTRELIAEYQPQEIEDDKLNASASLEKTRNEDTSTMTPHQREEH
                     TMWTGYYAALATSSNFLKIILPDITFTDSLTIHGSNIT"
BASE COUNT          454 a          336 c          380 g          406 t
ORIGIN      
        1 tcacagagcg gtgaaacagc agatacgctt gtcgctattg aaaccgcaaa agaacaaggc
       61 gcgataattc tcggggttgt aaacgtagtt ggttcatcta tagcccgcaa atcgcatgcg
      121 ggcgcatata cgcacgccgg ccctgagatc ggcgttgcaa gcaccaaagc atttacggcg
      181 cagcttgccg tgcttacgat gatcgctttg aagatcggtc gtgcgaaagg tacaattaac
      241 gaggaacgct actttaactt atgcagggag ttggtcgata ttcccgaaaa ggttgagctt
      301 gttttgcagc agggcgagac ggtgaaacaa ctggcggaaa aatataaaga cgcttatgat
      361 ttcttatatc tcgggcgtgg ctacaatttt cctgtggcgc tggaaggcgc gctgaaactg
      421 aaagaaattt cttacataca tgcggaagga tatcctgcag cagaaatgaa gcatgggcca
      481 atcgctttag ttgatgaaca tttgccggtg gtatttgtgg cgacacaaga ttcatatcat
      541 cacaaggtgg taagcaatat gcaggagatc aaggcgcgta aaggaaaagt gatctctatc
      601 attactgaag gagataccgt gtctccaccg ctttcagatg atgtaattgt tttacctccc
      661 gctgatgaaa tcgttgctcc catgcttagt gtaattccac tgcagttgct cgcatattat
      721 atcggcgttg ctaaaggttg tgacgtagac aagccgcgta atttagcaaa gagcgtcacg
      781 gtggagtaat gtgtgcacct ggatttgtgg catcttgaat cggatgtttt ttttgatacc
      841 agcaatggta actccggttg aacttcgttg cgtcgcaatc cgttcatctg caggaaaagt
      901 atggggcaaa aaaaaatttg cgagtactca gttccgttgc aagtaaacat tatgcaacca
      961 ctaaaaacag aagtatatta aaaatgaaaa aggtttcatt tctaactgga tggtttgttt
     1021 gcatttgttt ccagctttca gcgcaaactt ttcaatcaaa acatttcaca attcaaaaac
     1081 ttgcgcacgg tgtttatgcc gccattgcga caaatggtgg ttatgcgatt tgcaacgcgg
     1141 gcattgttga ccttggagat gcgacgctta tatttgaccc attcatgact ccggaggcag
     1201 cagacgatct gaaaaaagct gctgaacaac tcacgggtca tgctgtgaaa tacgtggtga
     1261 atagccattt tcataacgat cacattggcg gcgaccaggt attcacgggc gcagccttga
     1321 tcagcacaac gcgtacccgg gaactcatcg ctgaatatca gccgcaggaa atcgaggatg
     1381 ataaattgaa cgcatccgct tcgcttgaaa aaacgagaaa tgaagacact tcaacgatga
     1441 cacctcacca gcgtgaagag catactatgt ggacaggata ttacgcggcg cttgcaacga
     1501 gcagtaattt tttaaaaatc attttacccg acataacgtt taccgactca ctgactatac
     1561 atggctccaa tatcac
//
LOCUS       DASQJI010000241         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2481841,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000241 DASQJI010000000
VERSION     DASQJI010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2481841"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VEV83_06915"
     CDS             <1..608
                     /locus_tag="VEV83_06915"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK44879.1"
                     /translation="SFREKYNVDHDVIAIGIVGRIVPIKNLSMFVQVAASLRAITKTP
                     LCFFVIGDGFLKKEIQKQCDSNKLIWTEDGPAAENASVIFTSWIDDIIPPILGLDIVM
                     LTSHNEGTPMSIIEAQSCGKPVAATNVGGVRDTLIDEKTGFLVQRGDVQAMVKKIKLL
                     VENPELRMQMGLKAMEFASSQFSKQAEIENFKKLYNSAIQV"
     gene            605..1615
                     /locus_tag="VEV83_06920"
     CDS             605..1615
                     /locus_tag="VEV83_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK44880.1"
                     /translation="MTILVTGTAGFIGFHVANRLLNDGHDVVGIDSINDYYDTDLKYE
                     RLRHAGIDKERTIDGQHTVSNKTSSYSFYKGMLEDKNLLEKIFGDYSPQVVINLAAQA
                     GVRHSLNHPDAYISSNITGFMNLLECCRHSNVQHLVYASTSGVYGLNDVPYSTSQKTD
                     EPISIYAVTKKTNELMAHAYSYLFKLPTTGLRFFSVYGPWGRPDMALFLFTKKILAGE
                     AIQVFNEGNMMRDFTYIDDIVESVSRVMHKPPETSVPGKIYNIGNNAPVKLLEFIDAI
                     ENELGRRAQKEFLPLQPGDVPVTYAHVDDLVKHIGFKPSTPVAGGVKKFIDWYKWYYK
                     ID"
     gene            1622..>2307
                     /locus_tag="VEV83_06925"
     CDS             1622..>2307
                     /locus_tag="VEV83_06925"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HYK44881.1"
                     /translation="MAKNILITGGAGFIGSHVVRLFVNSYPDAKIINFDALTYAGNLE
                     NLKDVEHKPNYIFERGNILEPEAVENIFEQYDVTDVIHLAAESHVDRSILSPLDFIYT
                     NIIGTVNLLSAAKDYWKGSPVEHRFHHISTDEVFGTLGSEGFFTEETSYAPNSPYSAS
                     KASSDHFVRAYGETYDIPYVITNCSNNYGPNQFPEKLIPLFINNIIQKKPLPVYGKGQ
                     NTRDWLYVID"
BASE COUNT          659 a          491 c          527 g          630 t
ORIGIN      
        1 aatcgttccg ggaaaagtat aatgttgacc acgacgtgat tgctattgga atcgttggaa
       61 ggatagtgcc gataaaaaac ctgagcatgt ttgtgcaagt tgcggccagc ttgcgggcga
      121 ttacaaaaac accactctgc tttttcgtta ttggtgatgg atttttgaaa aaggaaattc
      181 agaagcagtg cgattcaaat aaactgatct ggacagagga tggccctgct gccgaaaatg
      241 cttctgtgat tttcacttca tggatcgatg acattattcc gcctattctc ggcctcgata
      301 ttgttatgct cacttcccac aacgaaggca cgccgatgag catcattgaa gcgcagagtt
      361 gcgggaagcc ggtagctgcc acgaacgttg gcggtgttcg cgacactttg atcgatgaaa
      421 aaaccggttt tcttgttcag cgaggtgacg tgcaggcaat ggtgaaaaaa ataaaattgt
      481 tggttgagaa tcctgaattg agaatgcaaa tgggtttgaa ggcaatggaa tttgcttcgt
      541 cacaattttc gaagcaggca gagatcgaaa attttaaaaa actgtacaac tcggctatcc
      601 aggtatgacg attttagtta cgggtactgc aggctttatc ggatttcatg ttgcaaaccg
      661 tttgctcaac gatggacacg acgtggtggg gatagacagc atcaacgatt attacgatac
      721 cgatctaaaa tatgaacgcc ttcgtcatgc cggaatagat aaggaacgca ccattgatgg
      781 gcagcacact gtgagcaaca aaacttcctc ttattctttt tataaaggaa tgcttgaaga
      841 caaaaatctg cttgaaaaaa tctttggcga ttactcgccg caggtggtga tcaatctcgc
      901 tgcacaagct ggcgtacgac acagcctcaa tcatccggat gcttatatct cgagtaatat
      961 aaccgggttt atgaacctgc tggaatgctg ccggcattcg aacgttcaac atcttgttta
     1021 tgccagcact tcgggagtgt atggactgaa cgacgttcca tattccactt ctcaaaaaac
     1081 cgacgaaccg atctcaatat atgccgtgac caaaaaaacg aatgagctca tggcacatgc
     1141 ttatagttac ctgttcaaat tgccgacaac cgggcttcga tttttttcgg tgtatggacc
     1201 gtggggccgc ccggatatgg ccctttttct ttttacaaaa aaaatactag ccggtgaagc
     1261 gatacaagtt tttaacgaag gcaatatgat gcgcgatttc acttacattg acgacatagt
     1321 tgaaagcgtt tcgcgcgtga tgcacaagcc gcccgaaacg agcgttccgg gcaagatcta
     1381 taacatcggc aataatgcgc cggtaaaact tttggaattc attgacgcta ttgagaacga
     1441 attaggcaga agagctcaaa aagaattcct tcctttgcag cccggtgacg tgcccgttac
     1501 atatgctcac gttgatgatc ttgtgaagca catcggtttt aaaccttcaa ctcctgtggc
     1561 tgggggcgta aagaaattta tcgattggta caaatggtat tacaaaattg attgaatttt
     1621 catggctaaa aatatactca taaccggtgg cgcgggtttt attggttcgc atgtggtgcg
     1681 gttgtttgtg aacagttatc ctgatgctaa gatcataaac ttcgacgcac tcacgtatgc
     1741 gggcaatctt gagaacctga aagacgttga acacaagcct aattacatct ttgaacgcgg
     1801 taacatttta gagcctgagg cggttgaaaa tattttcgag cagtatgacg taacggatgt
     1861 tattcatctt gctgcggaaa gtcacgttga caggtctatt ctttcccccc ttgattttat
     1921 ctacaccaac ataatcggaa ccgtaaactt gttaagcgct gccaaagact attggaaagg
     1981 aagcccggtt gagcaccggt tccatcatat ctccaccgac gaagtattcg gcacgctcgg
     2041 aagcgaaggc ttttttaccg aggaaacatc ctatgcgcca aattctcctt actcggccag
     2101 taaagcttct tccgatcatt ttgtgcgtgc atacggtgaa acttatgaca ttccttacgt
     2161 gataacaaac tgttcaaata attatgggcc caaccaattt cccgaaaaat tgatcccgct
     2221 tttcattaat aacattattc aaaagaaacc actgcctgtt tacggaaagg gccagaatac
     2281 aagggattgg ctttatgtga tcgatca
//
LOCUS       DASQJI010000242         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_24858,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000242 DASQJI010000000
VERSION     DASQJI010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24858"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1007
                     /locus_tag="VEV83_06930"
     CDS             <1..1007
                     /locus_tag="VEV83_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44882.1"
                     /translation="LWKAGCYCIDELNILLTHDKKCSILLKKDHFDGAVYSIDDFFQR
                     VKPCFDKPELFYRIFQPPSEECVQQLHRKNANGFTVYSFPSPVQTPWHENNTAYYRFF
                     GNSSSDTILLVVPGWARPDLSAEEGMCKQFLKNNIDCCLVTKPFHQERKVPGTFSGEL
                     FISGNIFLTVMNFRQQVAELRFLINRFRQTYKYIGIIGISSGGFQGGLACDVEEIDFY
                     FPIITGAKLGSIAWHGTLTKFVKQDIARKGVSEEQLNKAWAIADQLYLGDRCKAKHIK
                     QFISLYDPIVPTRYQVLLWQIYNCPEVFEMRCGHISTFFYFSRIVREITNFIRERKTK
                     "
     regulatory      1117..1229
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            1619..>1740
                     /locus_tag="VEV83_06935"
     CDS             1619..>1740
                     /locus_tag="VEV83_06935"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HYK44883.1"
                     /translation="MKNEHFNGKVILASAGPGDPELITIKTANYLNLADVVLTD"
BASE COUNT          523 a          363 c          366 g          488 t
ORIGIN      
        1 atttgtggaa ggcaggatgt tattgtattg atgagctcaa cattcttcta acccacgata
       61 aaaaatgttc aatcctgctg aagaaagatc attttgacgg tgcagtgtat tcgattgacg
      121 atttctttca acgggtaaag ccttgttttg ataagcctga actcttttac aggatctttc
      181 aaccaccttc ggaagaatgc gtgcagcaac ttcaccgaaa aaacgcgaac gggttcacgg
      241 tttattcgtt cccctctccg gtccaaacgc cctggcatga aaacaatact gcatactatc
      301 gctttttcgg caactcgtcg tcggacacca tattactagt agtgcccggt tgggcaagac
      361 ctgatctgtc ggcggaggaa ggaatgtgca aacaattttt gaaaaataac attgactgtt
      421 gcctcgtcac aaaaccattt caccaggaac gaaaagtacc cggtacattt tccggcgagt
      481 tatttataag tggaaacatt tttttgactg tgatgaattt caggcagcag gtcgcggagc
      541 ttagattcct cattaatcgt ttcaggcaaa cgtataaata catcggcatc attggcatta
      601 gcagcggcgg attccagggc ggccttgcat gtgatgttga agaaattgat ttttattttc
      661 cgatcatcac aggagcaaaa ctgggcagta ttgcctggca tggcacactc acgaagtttg
      721 tgaaacagga tattgcccgc aaaggagttt cagaagagca gctaaataaa gcctgggcaa
      781 ttgctgatca gctgtatctc ggagaccgtt gcaaagcaaa gcacataaaa caatttatca
      841 gcctgtatga tccaatcgtg ccaacacgat accaggtttt gttatggcag atatacaact
      901 gccctgaggt gtttgaaatg cgatgcgggc acatcagtac atttttttac ttcagcagga
      961 tcgttcgtga gatcactaat tttatccgag aacgaaaaac caaatgaaag aacaaatgtt
     1021 agtttgctta cgtaaagaaa aatttttgga aattctttcg ccagtaaccg caacaacaaa
     1081 atttatcaac tacatttgtt gcagctcttt aattattact tatcaagaaa ggctgaggga
     1141 aatggccccg cgaagcctta gcaaccagcc cggtgaaaac cgaggtatgg tgctaactcc
     1201 atcccgatgg atatcaggat agataagtca gatgcaagtt aaaaacacaa aaatgttata
     1261 acgaaagcac ttctgattta tcagcagtgc ttttttgttt caggcattgc tggtaaatat
     1321 tgataagtga ttgtcagatt caatcactgt taaatttaaa aacatgaaaa aggcaacatt
     1381 catttcaaaa ccgcaaacac aagtcctgac cacctcaact ttgaaggctg tgtgttgttg
     1441 ttgccgaatg cattcccgct gttgttgtaa gaactaattc ttgcgacttg tccgccgcga
     1501 cggacgttct ctaaaccgtt ttcaattttt ttatttcttt ttcgatttgc aaagccatag
     1561 cgtttgctga tgccttaagc gtaagcaaac gatcaaacta taaattattc gtttaaagat
     1621 gaagaacgaa cactttaatg gaaaggtaat cctggcttcg gccggcccgg gcgatccgga
     1681 actcattacc ataaaaacgg caaattatct taacctggct gacgtggtct taaccgacag
//
LOCUS       DASQJI010000243         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_946414,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000243 DASQJI010000000
VERSION     DASQJI010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946414"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VEV83_06940"
     CDS             complement(<1..953)
                     /locus_tag="VEV83_06940"
                     /inference="COORDINATES: protein motif:HMM:NF012563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HYK44884.1"
                     /translation="MSKSKLKKEVDAPQPANKEQTLKQAILNNLYYIQGKPADLATLN
                     DWYIAVAFTVRARLMENWVASLKRLRDKDLKIVAYLSAEFLMGPHLGNALINLGLYDE
                     MKEAVEALGLDLDKVIAQEEEPGLGNGGLGRLAACYLDSMTTLGVPAVGYGIRYEFGI
                     FDQQIHNGWQVEIADRWLRKGNPWEIARPEVSHRVKFGGHTENYTDENGNYRVRWIHG
                     HEVNGVAYDTPVPGYKNNAVNLLRLWKSEAVEDFDFSTFNQGDYLGAVNQKVASETIS
                     KVLYPNDVPDAGKRLRLSQQYFFVSCSLQNVLYLQKLRDLS"
     gene            complement(983..>1547)
                     /locus_tag="VEV83_06945"
     CDS             complement(983..>1547)
                     /locus_tag="VEV83_06945"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HYK44885.1"
                     /translation="HDYLWRCTKELPERGRIGIFNRSYYEEVLVVRVHEQLLRSQKLP
                     AELITKDIWDERLKDIRRFENYLNRNGTLVCKFFLNVSAKEQKKRFLERIDNPDKNWK
                     FSASDAKERKYWKDYMNAYEELIKNTATEKSPWYVVPADNKAFARIVVASAIINTLDS
                     IGLKYPTVSKEKLAELAEIKMQLEAEE"
BASE COUNT          384 a          380 c          320 g          463 t
ORIGIN      
        1 atagaaaggt cgcgcaactt ctgcaggtaa agaacatttt gtaacgaaca cgaaacaaaa
       61 aaatattgtt gagacagtct cagtcgcttg ccggcatcgg gcacatcgtt gggataaaga
      121 acttttgaaa ttgtttcaga cgcaaccttt tgatttacgg ctccgagata atcgccttga
      181 ttgaaagtgc tgaaatcaaa atcctccaca gcttccgact tccaaagtct taataaatta
      241 acggcattgt ttttatagcc gggaaccggt gtatcatatg ccacaccgtt cacttcatga
      301 ccatgaatcc accttacccg gtaattgccg ttctcatccg tgtaattttc agtgtggccg
      361 ccaaatttca ccctatgcga aacttcgggc ctggcgatct cccacgggtt tcccttgcgc
      421 aaccaacggt ctgcaatttc aacctgccat ccgttgtgta tttgttgatc aaaaattcca
      481 aactcatatc gaatgccata accaaccgcg ggaacaccga gggttgtcat cgaatcaaga
      541 taacatgcgg caagccttcc cagccctcca ttgccgaggc cgggctcttc ttcctgcgcg
      601 attactttgt caagatcgag acccagtgcc tcgacggctt ctttcatttc atcataaagg
      661 cccaggttga tgagcgcgtt accaagatga ggccccatta agaattcagc agataaataa
      721 gcgacaatct taaggtcttt gtcgcgtaat ctttttagcg aagccaccca gttctccatg
      781 agcctggcgc gtacggtgaa tgcgactgca atataccagt cgttcagtgt cgcgaggtct
      841 gcgggtttac cctggatata gtacaggtta tttagaatag cctgcttaag ggtttgctct
      901 ttgttcgccg gttggggagc gtcaacttct ttttttagtt tggacttact catcgcagaa
      961 aattttcaaa ttcttttggg ctttactctt cggcttccag ttgcattttt atttccgcca
     1021 gctcggccag tttttccttg ctcacagtgg ggtatttcaa accgatcgag tcaagggtat
     1081 tgatgatcgc cgacgcaact acaatgcgcg caaaagcttt gttgtcggcc ggcaccacgt
     1141 accatggcga tttttccgtc gccgtgtttt tgatcagttc ttcataagca ttcatatagt
     1201 ctttccaata ctttctttct tttgcatcgg atgcagaaaa tttccaattc ttatcaggat
     1261 tatcgatgcg ttcgagaaaa cgctttttct gctctttcgc cgagacattt aaaaagaact
     1321 tacatacaag cgtaccattg cgattgagat aattttcgaa acgcctgatg tctttaagac
     1381 gttcgtccca aatatctttt gttattagtt ccgcgggaag tttttggctc cgcaatagtt
     1441 gttcatgcac acgcaccact aacacttctt cataatacga ccgattgaaa attccgatgc
     1501 ggcctctttc cggaagttct ttcgtgcagc gccataaata atcatga
//
LOCUS       DASQJI010000244         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_639038,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000244 DASQJI010000000
VERSION     DASQJI010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639038"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..250)
                     /locus_tag="VEV83_06950"
     CDS             complement(83..250)
                     /locus_tag="VEV83_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44886.1"
                     /translation="MDKRSIVGAIRRNKKTVMGGQQNIYIAKLLNLYTIKGSRVLISS
                     PTYKLYPDHKD"
     gene            395..1447
                     /locus_tag="VEV83_06955"
     CDS             395..1447
                     /locus_tag="VEV83_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HYK44887.1"
                     /translation="MKCSLFLFTATVSALLVTAQQKTFTNPLLKSGADPYSFYKDGYY
                     YYTNTLADSIVIWKTKNLSELKTAEHRTIFRPPAGRPYSEELWAPEILFLRGKWYVYF
                     AADDGKNIHHRIYVLENSSRDPMAGDWQLKGKVSDATDKWAIDADVFEFKHKLYITWS
                     GWEGDKNGEQDIYIARMKNPWTIEGERVRISKPELQWETKGDLHDAQNPPHVSVNEGP
                     QFLEHDGRLFIVYSASGCWTDAYALGMLSFTGNGNLLDSSAWQKSKEPVFIGSQKNGV
                     YAPGHNSFFKSPDSKQYWILYHANSKELQGCGLYRSPRTQMFTWNADGTPNFGEPVKE
                     GVEIASPSEKIGSGKN"
     gene            1456..2520
                     /locus_tag="VEV83_06960"
     CDS             1456..2520
                     /locus_tag="VEV83_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-beta-xylanase"
                     /protein_id="HYK44888.1"
                     /translation="MKRFKLILTLLFLVLLAKTDAQKARAVWSAQKANEWYEHKGWLR
                     GCDFIPSTAINQLEMWQAETFDTGTINRELGYAEGIGLNCMRVFLHHVAWEVDKNGFK
                     DRLNQYLAIANRHHIITIFVLFDDCWNEAYKPGKQPLPKQGIHNSGWLRDPGKLYYDD
                     PALVNELETYLKDILKTFKHDKRILCWDLYNEPGNSDYGNKSLPLLQNVFLWARQVNP
                     HQPLTAGVWNPKLNDLNAYQLANSDVISYHDYENEKQHQLVIDTLKKYGRPLVCTEYM
                     ARLRDSRFDNIMPILKANNIVAINWGLVSGKTNTIYAWDTPMPNGEEPKVWFHDIFRQ
                     DGTPYDPKEIALIKSLTGKQ"
BASE COUNT          820 a          519 c          632 g          696 t
ORIGIN      
        1 attggcaatt aaaaggagaa ttaagtgacc cgccagataa ttgggcgatc gacgcgtctc
       61 tgtttgaata caatggctca tcttaatctt tgtggtccgg atagagttta taagttggag
      121 aagaaattaa aacacggctg cctttaatcg tataaagatt taaaagcttt gcgatataaa
      181 tattttgctg gccgcccata acggtttttt tgtttcgccg gatggctccg acaatggatc
      241 ttttatccat gcaaaccctc aaagcggttt aggctgtggc gatagccgga atccgagaat
      301 gcaaaagttc acatggaatg cggatcgaac gcctaatttt gcgcgcacgg ttgctattga
      361 tgcgccaata aaaaaacctt caggtaaata gcagatgaag tgttcgcttt ttttatttac
      421 tgcgacagta agtgcgcttc ttgttactgc gcagcaaaaa acatttacga acccgttgct
      481 aaaatcaggc gcagaccctt acagttttta taaagacgga tattattatt acacgaacac
      541 cttagccgat agcattgtaa tttggaaaac aaaaaatttg tccgagctta aaacagcgga
      601 gcacagaaca atttttcggc cgcccgcagg ccgcccgtat tcggaagaat tgtgggctcc
      661 tgaaatactc tttttgcgtg gaaagtggta cgtttatttc gctgctgatg atggaaaaaa
      721 tattcatcat cgtatttatg tattggaaaa ttcttcgcgc gatccgatgg ccggtgattg
      781 gcagttaaaa ggcaaagtat cggatgccac tgataaatgg gcgatagatg ctgacgtgtt
      841 cgaattcaaa cataaattgt acatcacatg gtcgggttgg gaaggagata agaatggtga
      901 gcaggatata tatattgcgc gaatgaaaaa tccgtggaca attgaaggtg aaagggtgcg
      961 catatcaaag ccggaacttc agtgggaaac gaaaggcgat ttgcatgatg cacaaaatcc
     1021 cccgcacgta agtgtgaatg aagggcccca atttcttgag catgatggaa gattgtttat
     1081 tgtgtattct gcaagcgggt gctggacaga tgcatacgca ttgggcatgt tgagttttac
     1141 aggcaatgga aatctattgg attcctcagc atggcaaaaa agtaaagaac cggtatttat
     1201 cggatctcaa aaaaatggcg tgtatgcacc cgggcacaat tcttttttta aatcaccgga
     1261 cagcaaacag tattggatct tatatcatgc caactcaaaa gaattgcagg gctgcggatt
     1321 ataccggtca ccaagaacgc aaatgtttac gtggaatgcc gacggcactc caaatttcgg
     1381 tgagccggtg aaagaaggtg ttgagatcgc aagcccttcg gaaaaaatcg ggagcggcaa
     1441 aaattaaaaa caactatgaa acgatttaaa ctaattctga cactgctttt ccttgttctg
     1501 cttgcgaaaa ctgacgcgca aaaagcaaga gctgtttggt ctgcacaaaa agcgaatgaa
     1561 tggtatgagc acaaaggctg gctgagaggt tgcgacttta ttccgagcac tgccattaac
     1621 cagcttgaaa tgtggcaggc ggaaacgttt gatacgggaa ccattaaccg cgagctgggc
     1681 tacgctgaag gaattggatt gaattgcatg cgtgtgtttc tacatcatgt ggcatgggaa
     1741 gttgacaaaa atggttttaa agaccggttg aatcaatacc tggcgattgc gaaccgtcat
     1801 cacatcataa ccatttttgt actgtttgac gattgctgga acgaggctta caagccaggt
     1861 aagcagcctt taccgaaaca aggcattcat aattccggtt ggttgcgcga cccgggaaaa
     1921 ttatattatg atgatcctgc gcttgtgaat gaactggaaa cttatctgaa agatattttg
     1981 aaaactttca aacatgacaa aaggatttta tgctgggacc tgtacaacga accgggaaat
     2041 tctgattacg ggaacaaaag tttgccgttg ctgcaaaatg tttttttgtg ggcaagacaa
     2101 gtgaacccac atcaaccctt aacagcgggt gtttggaatc cgaaactcaa cgatttgaac
     2161 gcataccagc ttgcgaactc ggacgttata tcatatcacg attatgaaaa tgaaaagcaa
     2221 catcagttgg tgatcgacac attgaagaaa tatggccgcc ctttggtttg caccgaatac
     2281 atggcaaggc ttcgagacag caggtttgat aacattatgc ccatcctgaa agcgaataac
     2341 atcgtagcaa taaactgggg actggtttca ggaaagacaa acaccattta tgcatgggat
     2401 acaccgatgc caaatggcga agagccgaag gtttggtttc atgacatttt cagacaagac
     2461 ggaacaccat acgacccgaa agaaattgcc ttgataaaat ctttgacggg caagcaataa
     2521 gttcggaaat tgttttgttc aacgctcgcc gaatacaata tcaggatgtg ggtcttgttc
     2581 cgggtatttt acaatgcagt cgctagtacc cgaacaccaa cgtaaataac aatctacgtc
     2641 ttcctttaaa gtgctgtaac cactgag
//
LOCUS       DASQJI010000245         1696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2022235,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000245 DASQJI010000000
VERSION     DASQJI010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2022235"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..86)
                     /locus_tag="VEV83_06965"
     CDS             complement(<1..86)
                     /locus_tag="VEV83_06965"
                     /inference="COORDINATES: protein motif:HMM:NF015286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase beta chain"
                     /protein_id="HYK44889.1"
                     /translation="MPHEAISVFDMLKIGVGPSSSHTLGPWRA"
     gene            263..970
                     /locus_tag="VEV83_06970"
     CDS             263..970
                     /locus_tag="VEV83_06970"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HYK44890.1"
                     /translation="MKKIVSSISALLFLALVISCNDNSTSNPTTGFFLVANVSPDAPA
                     LNLTINNQDMIDTGISFGTYTPYYSANAGTYNFAFYPSGSSTAAISNNVTIEANKVYS
                     YFLVDSFSEVKSSVVPDVFPKPPGDSVYVRFFNFSPSVPQPLSLFDSTANNVLATPFQ
                     SRAFNDQSVNPSFANFVEIPAGNYTLQLKMVDGTTLWSHNGNLDGGKVYTLFAQGSYN
                     GTGAQTFGLGQIVNYAP"
     gene            1212..>1696
                     /locus_tag="VEV83_06975"
     CDS             1212..>1696
                     /locus_tag="VEV83_06975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK44891.1"
                     /translation="MTVDYLIIGQGLCGTWLSYYLLKAGRSVLVIDNTNGNSASKVAS
                     GLINPVTGRRVVTTWLADELLPFVRKEYGDFSKTVNSGCIAEKNMLAFPSAPDLQQAF
                     DRRMNEGNGYIFRSSVSKESLREYFNFPFDVMEIAPCFLIDVQRFIGAWKDHLRIRDA
                     F"
BASE COUNT          465 a          373 c          369 g          489 t
ORIGIN      
        1 gcgcgccatg ggcccagggt atgggagctt gacgggccga cccctatctt gagcatatca
       61 aaaacagaaa tggcttcgtg tggcatgcga tcgtggtaaa gttagtgata actgccttgc
      121 aacgttttca ttgcacatac agtcagaaac attgaaaata agcggaaaca atttgaaacg
      181 ttttaacatt ttgcaagtct cttatttgca taatctttgc ggaaaccgcg ttttaaaata
      241 aaatttttat aaaaattcaa ttatgaaaaa gatcgtcagc agtatttcgg ctctgctttt
      301 tttggccctt gtaatatcat gcaacgataa cagtacttcc aatccgacga ccggcttttt
      361 cctggtggcg aacgtatctc ctgatgcgcc tgctttaaac ctcacgatca ataaccagga
      421 tatgattgat acaggtattt catttggaac atatacaccg tattacagtg cgaacgccgg
      481 cacttataat tttgcgtttt atccttccgg ttcatcaacg gcggcgatct caaataatgt
      541 gactatcgaa gcgaataaag tgtacagcta ttttttggtg gattctttca gcgaagttaa
      601 atcttccgtc gtgcctgatg tatttccaaa gccgccaggc gactcagtgt atgtaagatt
      661 ttttaacttt tctccgagcg tgccgcaacc cctcagcctt tttgattcta ctgcgaacaa
      721 cgtactggcg acaccattcc aaagccgcgc atttaacgac cagtcagtaa atccgagctt
      781 cgcaaatttt gtagagatcc ccgccggaaa ctatacgctg caattaaaaa tggtcgacgg
      841 cactacttta tggagccaca acggaaacct ggatggcggc aaagtttaca cgctattcgc
      901 gcaaggttcg tataatggaa caggcgcaca gacgttcggg cttggacaga tagtgaacta
      961 cgcaccctaa cacatttttt tattgaaacg gaaccgctca tatgggcggt ttttttgtgc
     1021 cactacgcac aagaggtata gtttcgaaca aagaaaatgc aatctttatt tgcgaaactt
     1081 agcagcgcct gttccaggga aagttccgct cagccatccg gaccgagctt atggttgctg
     1141 tcataacttt aagcattgaa atttttcact gtcctctttg ccggatattt taaaaattac
     1201 gctaactact gatgactgtt gattatctta taatagggca agggctatgc ggtacctggc
     1261 ttagttatta tttattaaaa gcaggacggt ctgtgttagt aatcgataat acgaacggga
     1321 attcagcaag caaggtagca agtgggctca taaacccggt taccggcagg cgtgtggtca
     1381 ctacctggct cgctgatgaa cttttaccat ttgttcgcaa agaatacggt gacttttcaa
     1441 aaacggtgaa cagcggctgc atcgctgaaa aaaatatgtt ggcctttcct tccgcacctg
     1501 atttacaaca ggcctttgat agaaggatga atgaaggcaa cggttatatt tttcgctctt
     1561 ccgtaagtaa ggaatcgctg cgcgaatatt tcaactttcc attcgacgtt atggagatcg
     1621 ccccatgttt tctaatcgat gtgcaacgct ttatcggcgc gtggaaagac catttgcgaa
     1681 ttcgcgacgc ttttat
//
LOCUS       DASQJI010000246         2427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1714494,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000246 DASQJI010000000
VERSION     DASQJI010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714494"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="VEV83_06980"
     CDS             complement(<1..1007)
                     /locus_tag="VEV83_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYK44892.1"
                     /translation="MRKAVVFLMFIPLLAHAQGKTSFLITGSIKSVPDSTQVILLDFN
                     GTDTLAVTTQQRGTFSLRGSVGNTDARIILFPTLQRRMVLFMGNDTVQIAGNSEFTDV
                     VITGSPSNLDYEEFIYDIKPLNDYVEFYRNQMMSATSQGMHDSAVIMLNTAYNIYQNA
                     IDRFLTRKKNSPVSALVLAYSYDTDPNRDVVLLQKRYNQLGSVALQSQFAKNVANVIK
                     DDMIGAVGTQALDFSQADTSGNTVSLSQFKGKYVLVDFWASWCRPCRMENPNVVAAYN
                     KYKNKNFTILGVSLDQERNNWLQAIRHDSLQWTHVSDLKQFQNAIAQLYHINQIPQNI
                     LV"
     gene            complement(1077..1883)
                     /gene="trpA"
                     /locus_tag="VEV83_06985"
     CDS             complement(1077..1883)
                     /gene="trpA"
                     /locus_tag="VEV83_06985"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HYK44893.1"
                     /translation="MNRLTQLFDNLSLATEKRGLLNVYCTAGYPQLDSTLKVMKALQD
                     SGADIIELGMPYSDPLADGPIIQASSAKALQNGMTIEKLFEQLRSFRNSDPAGDGGIY
                     IPVILMGYMNPVLQFGFEKFCKYAADMPVDGLILPDLPEYEFENEYGPIIKRYGLDFI
                     FLVTPETSDERIRKLDQLSTGFLYAVSSSSTTGKQKDFAEVENYLQRLQDMKLKNPVL
                     VGFGIKDKNSFEAACRHATGAIIGSAYIKAIEETDDVEMATKQFLSSILG"
     gene            complement(1910..>2427)
                     /locus_tag="VEV83_06990"
     CDS             complement(1910..>2427)
                     /locus_tag="VEV83_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HYK44894.1"
                     /translation="LPAYVVACVGGGSNAAGAFYNFLDDLSVQLVAVEAAGCGINSGM
                     SAATTQLGKPGILHGSKSLVMQTADGQVVEPHSISAGLDYPGIGPMHANLYETGRAKF
                     LSATDDEAVEAAFHLTKLEGIIPALESAHALAALKQLRFRASDVVVLCLSGRGDKDLA
                     TYMKAMPLADQ"
BASE COUNT          631 a          573 c          531 g          692 t
ORIGIN      
        1 acgaggatgt tttgaggaat ttggttgata tgatataatt gtgcgatggc attttgaaat
       61 tgcttcagat cgctcacatg cgtccactga agactatcat ggcggatcgc ctgtaaccag
      121 ttatttcttt cctggtcgag cgacactccc aaaattgtaa aattcttatt cttgtatttg
      181 ttgtatgcag cgacgacatt cggattttcc attctgcatg gacgacacca gctcgcccaa
      241 aaatctacga gcacatattt gcctttgaat tgcgagaggg aaacagtatt gccggaagta
      301 tctgcctgcg agaaatcgag agcctgagta cctacggcgc cgatcatatc atcctttatc
      361 acatttgcga cgtttttcgc aaactggctt tgcaaagcaa cagaaccgag ttgattatat
      421 cttttctgaa gcaacactac atcgcggttg ggatcagtgt cataactgta tgcaagcact
      481 aatgcagaga ccggcgaatt ttttttacgc gtgagaaaac ggtctattgc gttctgataa
      541 atattatacg ctgtgttcag catgatcact gctgaatcat gcattccctg ggatgttgct
      601 gacatcattt gattacggta gaattctaca taatcgttca gcggcttgat gtcgtaaata
      661 aattcttcat aatcgagatt gctgggcgaa ccggtgatca caacgtcggt gaattcgcta
      721 ttcccggcga tctgaacggt gtcgttaccc ataaacaaga ccattcgtcg ctgtaacgta
      781 gggaaaagta ttatgcgtgc atctgtattt ccaacagagc cgcgcagtga aaatgtgccg
      841 cgctgctgag tggtgactgc cagggtatct gttccgttga aatcaagtaa gatcacctgg
      901 gtgctgtcgg gtaccgactt gatgctgcca gtgataagaa atgatgtttt gccttgtgcg
      961 tgagccaata aggggataaa cattaaaaaa acaaccgctt tcctcattat cattgcaagt
     1021 actatttaag aaattgccgc caaattaaaa ataaatcatg aaaccgcgat agcaagctag
     1081 ccgagaatgg atgaaaggaa ttgttttgtc gccatctcca cgtcatctgt ttcttcaatc
     1141 gcttttatat aggcgctgcc gattattgcg ccagtcgcgt gcctgcaggc cgcttcgaaa
     1201 ctgttcttat cttttatacc gaaaccgacc agcacgggat tcttaagctt catatcctgt
     1261 aaccgctgta agtaattttc gacttcagca aaatcttttt gtttgcccgt tgttgatgaa
     1321 gacgataccg cgtacaagaa gccggtgctc aactgatcaa gctttcttat tcgttcgtcg
     1381 gaagtttctg gcgtaacaag aaaaataaaa tccaaaccat accttttaat gatcggacca
     1441 tattcatttt cgaattcata ctcgggcaga tctggaagta tcagcccgtc gacaggcata
     1501 tccgcggcgt atttgcaaaa tttttcaaat ccaaactgta gcaccgggtt catatagccc
     1561 atcagtatta cgggtatata aatgccgccg tctccggcgg gatcgctatt tcgaaaactg
     1621 cgcaattgtt cgaaaagctt ttcgatcgtc ataccatttt gcaaagcctt tgcgctgctt
     1681 gcctgtataa tagggccgtc tgccaaaggg tcgctgtaag gcatgccgag ctcaattata
     1741 tcagcaccac tatcttgcaa tgccttcatc actttaagtg tactgtctaa ttgtggatag
     1801 ccggccgtgc agtaaacgtt taggagccct cgtttttccg tcgccaaaga aagattatcg
     1861 aaaagctgcg ttagtctgtt catttcaata acaatgaaga tttttgtttt tactggtcgg
     1921 ccaaaggcat tgccttcatg tacgttgcca ggtccttatc acctcttccg ctgaggcaaa
     1981 gcactacaac gtcggatgct ctaaatcgca attgcttcag cgcagccaat gcatgtgcac
     2041 tttccaatgc cgggataatt ccttccagct tcgtcaggtg aaatgcagct tcgaccgctt
     2101 cgtcatcggt ggctgacaaa aattttgcgc gacctgtttc ataaagattt gcgtgcatag
     2161 gaccgatgcc gggataatct aatcctgccg aaatgctatg cggttccaca acctgcccgt
     2221 ctgcagtttg catcaccagg cttttgcttc catgtaagat gcccggttta ccgagttgtg
     2281 tagttgcggc gctcatgcca ctgttgatac cacatcccgc cgcttccacc gcaactagct
     2341 gcacagaaag gtcatctaaa aaattataaa atgcaccggc tgcattactg ccaccgccca
     2401 cgcatgcaac aacgtatgcc ggcaact
//
LOCUS       DASQJI010000247         3416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_178726,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000247 DASQJI010000000
VERSION     DASQJI010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178726"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1254
                     /gene="rimO"
                     /locus_tag="VEV83_06995"
     CDS             <1..1254
                     /gene="rimO"
                     /locus_tag="VEV83_06995"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HYK44895.1"
                     /translation="SKNLVDSEVLSGQLQANEIDVVHENAKLDHNIVVVNTCGFIDKA
                     KEESINTILEQVDLKKRGRLDKVYVTGCLSERYRNDLESEIPEVDAWFGTLQLPLILR
                     QLNADYKTELLGERLLSTPKHYAYLKISEGCNRTCAFCAIPLMRGPHISKPIESIVAE
                     AEGLVRKGVKEIMLIAQELTYYGLDIYKKRMLADLLKHLSDVQGLEWMRLHYAYPNKF
                     PFEVLDVMRERSNICNYLDMPLQHASDHMLKSMRRQSTKAEMQETLSIVREKIPGICL
                     RTTLIAGFPGETRDDVEELKSFLNEQRFDRVGIFTYSHEEGTSGYELADDVTPEEKQE
                     RAEEIMELQQGISYEKNREKIGQVYKVLIDKKEAGRYLGRTEFDSVEVDNEVIIHSHK
                     ELPVGEFVNAKITKAYDYDLEGEVV"
     gene            complement(1363..>3416)
                     /locus_tag="VEV83_07000"
     CDS             complement(1363..>3416)
                     /locus_tag="VEV83_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK44896.1"
                     /translation="VGSNNELTSQYSVRGGSYDENLIYVNDFEIYRPFLVQSGQQEGL
                     SFINPELTSSVRFYNGGFPAKYGDKLSSALDVTYNKPVSNGGSLYLGLLEQGLHLEGV
                     LDNRKVTYLIGVRNRSNKSLLSSQNTQGNYIPSSIDLQGLITWQAAKKLRLEAFANLS
                     GTKFSFVPTESQLTSSVFTPYFSGSIGLDVFYEGQEKDKYATHFAGLTAVQQLNARLQ
                     LKWLVSYYNDDEEENRDISGAYLFGERNFDNGNNGSITNPLGAGVDQNYARNELNIDV
                     YSLSHKGSFANGRHYFLWGNTIDFQSINSHVHQFEYLDSAGYSLPYDPFSASIFYHAN
                     HDTDFSVARFSGYLEDNIQFKDSSDFTFQAGIRYNYNTLNNEFLVSPRIGFSFTPRNW
                     NKDVIFKGSAGIYDQPPFYREMVRYDGSINTALRSQKSWQASLGLDYNLPLWNGPGRI
                     TTEVYYKNMWDVVPYDVDNVQLHYYGENMAKAYAVGMETRLFANLVKDAESWISLGIM
                     QTKENLNNDTYTDYYNAQGELITVGTGDKVVTDSAVNEVGWLRRPNDRRITFGMFIQD
                     YLSTNKNIRVYFTVLYGSNLPYNIPGSTRYRNALEIDPYLRADIGFGALLFDPEKHHR
                     SHSPFRNFKSMWASLEIFNVVDRANTISYQLIKDYSNNIYALPNRLTPRMVNFKIAAS
                     W"
BASE COUNT          958 a          751 c          777 g          930 t
ORIGIN      
        1 agcaaaaacc tcgttgacag cgaagtgctg agcggccagt tgcaggcgaa tgagatagat
       61 gtcgtgcatg aaaatgctaa actcgatcac aatattgtgg tagtgaatac ctgcggattt
      121 atagataaag caaaggaaga aagtattaac acgatcctgg agcaggttga tcttaagaaa
      181 cgcggccggc tggacaaggt ttatgttaca ggttgcttga gcgaacgcta caggaacgat
      241 cttgaatcag aaattccgga ggttgacgca tggtttggaa cattgcaact tcctttgatc
      301 cttaggcagc tcaatgcaga ttacaaaacc gaattgctcg gtgaacggtt actaagcacg
      361 ccgaaacatt atgcgtattt aaagattagc gaaggttgca atcgtacctg cgctttttgt
      421 gcgattccgc ttatgcgcgg cccgcatatc agtaaaccga tcgaatcgat cgtggctgaa
      481 gcagaaggtt tggtgagaaa gggcgtgaag gagatcatgc tgatcgccca ggaacttact
      541 tattatggtt tggacattta caaaaagcgc atgcttgctg atttgctcaa acatttgagc
      601 gatgtgcagg gattggaatg gatgcgcctg cattatgcat atccaaataa atttccattc
      661 gaggtgttgg atgtgatgag agaacggagc aacatttgca attatcttga catgcctctg
      721 cagcatgcaa gcgatcatat gcttaagtca atgcgcaggc aaagcacgaa agcagagatg
      781 caggaaacgc taagtatcgt tcgtgaaaag attccaggga tttgcctgcg cacaacattg
      841 atcgctggtt ttccgggtga aacgagggat gatgtagaag aactcaaaag ctttttgaac
      901 gaacagcgtt tcgatcgtgt aggtattttc acttacagtc atgaggaagg aacttcaggc
      961 tacgagttag ccgatgatgt tactccggaa gaaaagcagg agagagcgga agagatcatg
     1021 gaattgcagc agggaatcag ttatgagaag aaccgagaaa agatcggaca agtgtacaag
     1081 gtcctcatcg ataaaaagga agccggtcgt tatctcggcc gcaccgaatt cgacagcgtc
     1141 gaggtagata atgaggtcat catccactcg cacaaagaac ttcctgttgg tgaatttgtc
     1201 aacgcaaaaa tcacaaaggc ctacgattac gatttagagg gcgaagtcgt atagtttttc
     1261 acctacgttc agtttggccc acatctcgtt tttccggcgt tccgttgctg catggattgc
     1321 ctatcgtgct ggtaaacgcc gttaagaaca ttgcttcaca cttcaccaac tcgccgcaat
     1381 tttaaaattt accatcctcg gcgttagccg gtttggcaaa gcgtaaatat tattgctata
     1441 atctttgatc aattgataac tgatcgtatt tgcccggtcc acgacgttga aaatttctaa
     1501 gcttgcccac atacttttga aatttctgaa cggcgaatgg ctgcgatgat gtttttccgg
     1561 gtcaaataac aatgcgccga agccaatatc cgcacgcaaa tatggatcga tctccagtgc
     1621 atttcggtaa cgtgtactgc ccggaatgtt atatggcaaa ttgctgccat acagcaccgt
     1681 gaaataaacc ctgatgtttt tattagtgct gagataatcc tggatgaaca tgccaaaagt
     1741 aatacggcga tcgtttggac gacgaagcca gcccacctcg ttcactgcac tgtctgttac
     1801 aaccttgtca cctgttccaa cagttatcag ttcgccttgc gcattataat aatccgtgta
     1861 agtatcgttg tttaaattct ccttcgtttg catgatccca aggctgatcc agctttcggc
     1921 atctttcaca agatttgcga atagcctagt ctccatccca actgcataag ccttagccat
     1981 gttttcgccg taataatgca gttgcacgtt gtcaacgtcg tagggcacga cgtcccacat
     2041 atttttataa taaacttcag tggttatgcg cccggggccg ttccacaagg ggagattata
     2101 atcgagcccc aaacttgcct gccagctttt ttgggatctc aacgcagtgt ttatggagcc
     2161 atcatatcgt accatctcgc gataaaacgg tggctgatcg taaatgcctg ccgagccttt
     2221 gaaaatgaca tctttgttcc agttccgcgg tgtgaatgaa aacccgatgc gcggggaaac
     2281 caaaaactca ttattcaatg tgttgtaatt atagcggata ccagcctgaa atgtgaaatc
     2341 agacgaatct ttgaattgta tattatcttc taagtatccg ctgaaccttg caacagaaaa
     2401 atctgtgtcg tgatttgcat gataaaaaat tgaagcagaa aacggatcat agggcaacga
     2461 gtaacccgcc gaatcgaggt attcgaactg atgcacatga ctgttgatgc tttgaaaatc
     2521 gatggtgttt ccccacaaaa aataatgcct gccatttgca aaactgcctt tgtgcgataa
     2581 actgtagacg tcaatgttca attcattccg cgcgtaattc tgatcgacgc ccgcacctaa
     2641 tggatttgtg atggaaccgt tattgccatt atcaaaattt cgctctccaa aaagatacgc
     2701 tccggaaatg tcgcggttct cttcttcatc atcgttataa taactcacca gccatttaag
     2761 ttgcaatctt gcattcagtt gctgtacggc cgttagccct gcaaagtgag tcgcatactt
     2821 atctttttcc tgtccttcat aaaaaacatc caggccaata cttccggaaa aatagggtgt
     2881 gaaaacggaa gacgtaagct gtgactctgt tggaacgaaa gagaacttcg tgccggacaa
     2941 gtttgcaaac gcttcgagcc ttagcttttt tgcagcctgc cacgtgatga gtccctgtaa
     3001 gtcaattgat gacggaatat aattaccctg cgtgttctgg ctgcttaata aacttttatt
     3061 acttcgattg cgaactccta taagataggt gaccttcctg ttatccagca caccttcgag
     3121 gtgtagcccc tgttcaagta aacctaagta aagcgaccca ccattcgata caggcttgtt
     3181 ataagtgaca tccaatgcag agctgagttt gtctccatac tttgcaggga agccaccgtt
     3241 gtaaaatctc acgctgcttg tgagttccgg gttgatgaaa cttaaacctt cctgctggcc
     3301 actttgtaca agaaacggcc tgtagatctc aaaatcattt acgtagatca ggttctcatc
     3361 ataactgcct ccccgcactg aatattggga agtgagttca ttgttgcttc caacga
//
LOCUS       DASQJI010000248         2842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1253080,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000248 DASQJI010000000
VERSION     DASQJI010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1253080"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VEV83_07005"
     CDS             <1..796
                     /locus_tag="VEV83_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HYK44897.1"
                     /translation="VVTAKAKSKIKDSLKEEKRKIADDGKYILQKKLEGVGAALNQHN
                     IDELVNYYKAPSQLDLFYNIAVKHTDLKELKEFSVSGDKIEAPKPQKVITEIKHEEFK
                     PSHKKDSELIIFGESGDKIKYSLAKCCNPIPGDDVFGFVSTGKGLIIHRTNCPNAARL
                     MANYAPRIVKTKWAKNKEISFLTGLRIIGMDDVGVINKITNVISGELRINIAALTIES
                     GEGVFEGTIKVFVHDKEELDELVNRLKQLNGIHEVQRFDTEEGSVT"
     gene            complement(789..1235)
                     /locus_tag="VEV83_07010"
     CDS             complement(789..1235)
                     /locus_tag="VEV83_07010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44898.1"
                     /translation="MATRITSANGVYDLSEVKTLKDLREEIGFIRASIKKDEVELEAR
                     LHRMPQEALKVTADAVLPGFLNRMIANGSWKILASGAGLLVNPFSKKYTFSKSIVSGA
                     KRLGLVALMRGAYNLWKSKRSGAPTPLAVTSKTTPTIKKVPPPKTK"
     gene            complement(1237..1584)
                     /locus_tag="VEV83_07015"
     CDS             complement(1237..1584)
                     /locus_tag="VEV83_07015"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HYK44899.1"
                     /translation="MPEEENYFQETKRRIKQYIDQRILLMRLQLTEKVSRIAAALITT
                     FLVAVVGVFLLIFISIAAGLWLAQLTGSLAAGFGIVALFYFVVFLFIVLFMKKILQNF
                     FINKFIHLIHKKD"
     gene            complement(1606..1866)
                     /locus_tag="VEV83_07020"
     CDS             complement(1606..1866)
                     /locus_tag="VEV83_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HYK44900.1"
                     /translation="MNTNQRFLSGIILGVAAGVAIALFSQSRRGREILAEVTDAAGEA
                     GENLKSKFSDFEDQAKDLLKKGKAFIDELESKAKNVAGSVFD"
     gene            1934..>2842
                     /locus_tag="VEV83_07025"
     CDS             1934..>2842
                     /locus_tag="VEV83_07025"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYK44901.1"
                     /translation="MESTNNYKINRYVFLAIILIFAVFLFASLKQFVSAFLGAMMFYV
                     LSKPFIIWLVTKKRWSKSMTAVLVIIISFFLILLPIAALVSLLYNKISAVLANPSLIT
                     DSMKQVDAIIKQKIHMDLISDNTLKTIQSYTSSLLSVIFTQGLGFITTILMMYFFLYF
                     MIQNVNRMEAAIVFYLPFKKDKIKIFGDELVHQTFSNSVGIPAIAVVQGLFSFICYLI
                     AGLDEAGFWAVITGFSALIPVIGTGLVWVPSAGYLLITGHTWQGIFVLLYGAIVLGSL
                     DNVVRFVLAKKMADVHPVVTVLGVIIG"
BASE COUNT          790 a          611 c          626 g          815 t
ORIGIN      
        1 cgtcgttacc gcaaaggcaa aaagcaagat caaggactcg ctcaaagagg aaaaaagaaa
       61 aatagccgac gacggtaaat acatacttca gaaaaaactt gaaggcgtcg gcgccgcatt
      121 gaaccagcac aacattgatg aactggtgaa ttattacaag gctccttcgc agcttgatct
      181 attctacaat atcgccgtta agcacacaga cctaaaagag ttgaaagagt ttagcgtctc
      241 aggtgataaa atagaagctc caaaaccgca gaaagtaata acagagatca agcatgagga
      301 attcaagccg tcccacaaaa aagattcgga actgatcatt tttggtgaga gcggagacaa
      361 aataaaatat tcgctggcaa aatgttgtaa cccgatcccg ggtgacgatg tatttggttt
      421 tgtgagcaca gggaaaggcc ttattattca tcgcacaaat tgtccgaacg cggcgcggct
      481 gatggcgaac tatgcgccga gaatcgttaa aacaaaatgg gcgaagaaca aagagatctc
      541 gtttctcacc ggtttgcgaa tcatcggtat ggatgacgtg ggcgttataa acaagatcac
      601 gaatgtgatc agcggggaat tgcggatcaa cattgcggcg ctaacgattg aatcggggga
      661 gggagtgttt gagggcacga taaaggtgtt cgtgcacgat aaggaagaac tggacgaatt
      721 agtgaaccgg ctgaaacagc ttaatggtat tcacgaagtg caaagattcg ataccgaaga
      781 agggtctgtc acttagtttt tggcggcggt actttcttta tggttggtgt tgttttgctc
      841 gttactgcta acggtgttgg agcgcccgat cgcttgcttt tccataggtt gtaagcacct
      901 ctcatcaacg caactaatcc caatctcttt gcgccactta cgatgctttt actgaaagtg
      961 tatttttttg aaaacgggtt taccaaaagg cctgcaccac ttgccaggat cttccacgat
     1021 ccatttgcga tcatccggtt taaaaaacca ggaagcactg catccgcggt cacctttaat
     1081 gcttcctgcg gcatcctgtg aagccgtgct tcaagctcca cttcatcttt tttaatggat
     1141 gcacgaataa aacctatctc ttcacgcaaa tcttttagcg tcttaacttc cgagagatca
     1201 tacacgccgt ttgctgaagt tatcctggta gccatgctaa tcttttttgt ggatcaggtg
     1261 aatgaatttg ttgatgaaaa aattctgaag gatctttttc ataaacagca caataaacaa
     1321 aaacacgacg aaataaaata gggctacaat tccaaaaccg gctgccaggc tgccagtcag
     1381 ctgggccagc cacagacccg ccgcgatgct aataaagatc aacaggaaaa cacccaccac
     1441 tgcaacaagg aacgtcgtga tcaatgcagc agcaatgcgc gatacctttt ctgtaagctg
     1501 cagccgcatg agtaaaatgc gctggtcgat atactgcttt attcttcttt tagtctcttg
     1561 aaaatagttt tcttcttccg gcatttttgc tatttaagaa ctaaattaat caaaaaccga
     1621 acccgccaca tttttcgcct tgctttcgag ctcatcgata aatgctttgc ctttcttcaa
     1681 gaggtctttc gcctggtctt caaagtcgct gaatttgctc tttaagtttt cgccagcctc
     1741 gccggctgcg tcagtaactt cagctaatat ttcccttcca cggcggctct gtgaaaaaag
     1801 cgcgatggca actccggctg caacgccgag aatgattccg gataaaaacc tttgatttgt
     1861 attcatgaat gtggaattta ttggatgaaa taatatttaa aatttctaaa aattttgatg
     1921 actaaattcg cctatggaaa gtacaaataa ttataagatc aaccggtacg ttttcttagc
     1981 cattatttta attttcgctg ttttcttatt tgccagtttg aaacaattcg tttccgcatt
     2041 tcttggtgca atgatgtttt atgtattgag caagccattc atcatctggc ttgttacaaa
     2101 aaaaagatgg agcaaaagta tgactgccgt gctggttatc atcatctcct tctttttgat
     2161 attgctgccg atcgccgcgc ttgtcagcct tttgtataac aagattagtg ccgtgttggc
     2221 aaatccctcg ctcatcaccg attcgatgaa acaggtagat gcgatcatca agcaaaaaat
     2281 tcacatggat ctcatttccg acaatacgct taagaccatc caatcataca cgtccagttt
     2341 attatccgtg atctttacgc aaggcctcgg tttcattacc accatcctga tgatgtattt
     2401 ctttttgtat tttatgatac agaatgtaaa ccgtatggaa gcggctatcg ttttctacct
     2461 gccgttcaag aaagacaaaa ttaaaatatt cggtgacgaa ctggtgcatc aaacgttcag
     2521 caattctgta ggcattcccg ctattgcggt agtgcagggc ttgttcagtt ttatttgtta
     2581 tctcatagcc ggtttggacg aggctggatt ttgggcggtg atcacgggat tttccgcatt
     2641 gataccggtt attggaactg ggctcgtgtg ggtaccgtct gccggttatc tcttgatcac
     2701 cggacacaca tggcagggaa ttttcgtcct gctttatggt gctattgttc ttggcagtct
     2761 tgataatgtg gtgcgatttg ttttggcaaa aaaaatggct gacgtgcacc ccgtcgttac
     2821 agtgctggga gtcatcattg gg
//
LOCUS       DASQJI010000249        13739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_793467,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000249 DASQJI010000000
VERSION     DASQJI010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13739
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793467"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(287..754)
                     /locus_tag="VEV83_07030"
     CDS             complement(287..754)
                     /locus_tag="VEV83_07030"
                     /inference="COORDINATES: protein motif:HMM:NF025425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4251 domain-containing protein"
                     /protein_id="HYK44902.1"
                     /translation="MKRFLFVTSFIIASATAAMAQKLAAAEVKDMVNNKTYVFEAETA
                     RPTAGGIRHLTPGYTLKVNGDSLSADLPYYGKSYTAPMNPSDVGIKVTTTDFDYKVAN
                     GKKNSYDVSIKARDKAYNSEFNLTVYDNGTAYLQVSSPDRQSISFNGYIKAVK"
     gene            915..2546
                     /gene="pruA"
                     /locus_tag="VEV83_07035"
     CDS             915..2546
                     /gene="pruA"
                     /locus_tag="VEV83_07035"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HYK44903.1"
                     /translation="MNLGYFSYPMPVNEPVLNYAPGSAERVQLKKVLAELKSGDTDMP
                     MYIGGDEVRTGNKVALHPPHELQHTLGYFHAGDEGHVRQAIEAAMKAREAWANMPWEE
                     RAHIFLRTADLMAGKYRYHMNGTTMLGQSKNAFQAEIDSACELIDFLRFNVHFLSEIY
                     KQQPNSAPGMHNRMEWRPLEGFVLAITPFNFTAIGGNLPTSAAMCGNVVVWKPAHTQI
                     FAAQMFMRILKEAGLPDGVINLIYVDGPTLGKVCFAHRDFAGVHFTGSTGVFNYMWKT
                     IGENAGKYKSYPRIVGETGGKDFVLVHKTAEVDVVVTALARGAFEFQGQKCSAASRAY
                     LPSNLADQIKQRLTAELKTMKMGSVEDFSNFINAVIDENSFDNITRYIENAKSDPNAE
                     IIAGGNYDKTKGYFIEPTVIEAKDPNYVSLCEEIFGPVLTVFVYDENKFEETIELVNN
                     TSPYALTGSIIARDRDAITLATEKLRHAAGNFYINDKPTGAVVGQQPFGGARASGTND
                     KAGSMLNLYRWLSARTIKETFNPPTNYRYPFLSQD"
     gene            2556..3362
                     /locus_tag="VEV83_07040"
     CDS             2556..3362
                     /locus_tag="VEV83_07040"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK44904.1"
                     /translation="MRHTRIVIFIFLAIIGRSFAQEKVATDSGYLVSFDSTKIYYEVY
                     GNGFPTLLVHGFISNSQSWKRTALFDSLVASGRKVILIDMRGNGRSDKPHTDEAYMND
                     AETKDLMMLITKLKIFQYDVIGYSRGSIITCRLMVWDRRIHKAVLGGMGIEFTNPEWP
                     RRIRFYEALTTDTVPELHDMVQYVQQAGLDQHALALLQKYQPSTSISTLRTIKIPVLI
                     IHGDLDDDNGSADQLAVVFPFSEKAVVPGMHNSALQTPEFAQAVILFLNK"
     gene            complement(3432..3653)
                     /locus_tag="VEV83_07045"
     CDS             complement(3432..3653)
                     /locus_tag="VEV83_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002996718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HYK44905.1"
                     /translation="MFWTLELASYLEDAPWPATKDELIDYAIRSGAPIEVVENLQELE
                     DEGEVYESIEDIWPDYPSQEDFLFNEDEY"
     gene            3778..4431
                     /locus_tag="VEV83_07050"
     CDS             3778..4431
                     /locus_tag="VEV83_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK44906.1"
                     /translation="MLSAKGIKKTYGQLEVLKGVDLQIGESEIVCIVGSSGAGKSTLL
                     HILGTLDMPDSGEIFLKDVALHQLKGKKLADFRNHHIGFVFQFHHLLPEFTALENVCI
                     PGWIAGNQKKQTEEEAVRLLTILGLHDRLDNKPMALSGGEQQRVAVARALINKPAIVF
                     ADEPTGNLDSVHARELHQLFLQLREQFKQTFLIVTHNEELSEMSDRILHMKDGKIVL"
     gene            4558..5748
                     /locus_tag="VEV83_07055"
     CDS             4558..5748
                     /locus_tag="VEV83_07055"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HYK44907.1"
                     /translation="MHLSSLLHRFNEPETLKMAKLGRELRSQGFEVIDLSLGEPDFNT
                     PDHIKQAAIQAIDDNWSHYTPVAGYLDLRQAVCTKLKRDNGLDYEPGNIVVSTGAKQS
                     LANTILALVDKGDEVIIPTPYWVTYSELVKLAEGKVVEIRSKLEHGFKISPLELEQAI
                     TPKTKAFLFSSPCNPSGAVYTKEELANLADVFRRHPDIAIISDEIYEYINFGGTHQSI
                     AQFEDLKERIIIVNGLSKAFAMTGWRLGYIAANVEIAKATEKIQGQFTSGTNSIAQRS
                     AITALTADLSPSFEMVKQFAERRKRVLELVAEVPGLKCFEPQGAFYIFPDVSSYYGMS
                     YGETVIQDANELCMYLLNTAHVSSVMGDAFGEPNCVRFSFANSMENIEKGWARIKEAL
                     GKLK"
     gene            6001..6408
                     /locus_tag="VEV83_07060"
     CDS             6001..6408
                     /locus_tag="VEV83_07060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44908.1"
                     /translation="MDYSFIILLISIFAARFIQINAFRNLADEDKGKVMSKDIMRLSQ
                     ASLIFTIILIVAFYFLISKYPGNFSGITSSFFMVLILQRVFVYVVSRRRMVSNGVPAS
                     YLSKYFLSWAVTTIGVALFILFFMWSSYNGPGQ"
     gene            6781..7713
                     /locus_tag="VEV83_07065"
     CDS             6781..7713
                     /locus_tag="VEV83_07065"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK44909.1"
                     /translation="MFQNRLLKVYRHHSKQAKRLNVSCYRIYDHDLPEFPFAIELYDD
                     KIYVAEYRRRHGMNEEEHEEWLQASFDIISNVLQLPVENIYSRERRRLSHRESQQYEK
                     QSLARQFFTIQESGLKFLVNLTDYLDTGLFLDHRITREMIRSESHNKTVLNLFCYTGS
                     FSVYAAAGEAASVTSVDLSKTYLEWAEDNFVINHLKDEKKFHFIHADVKKYLKMLKKN
                     SFDLIIMDPPTFSNSKRMKDFLDIQRDHIDLINQALFALSPNGVLYFSTNYSKFLLAE
                     DKIEASSIKDITKQTTPFDFEGKLKRFCFKIAKQ"
     gene            8068..10680
                     /locus_tag="VEV83_07070"
     CDS             8068..10680
                     /locus_tag="VEV83_07070"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK44910.1"
                     /translation="MKRLLVFLLLAIAVSGSTIAQMQSVADSGQHSNYDHRAAFAPLF
                     YPSGNEFRSASGQPGPSYWQNKADYKIVATLDTLQHRLTGSVTISYKNNSPDNLAFLW
                     LQLDQNIYRADSRGQATTPQAGGRWSNRTFTQGDELKSVSLVSNGIATQAKYNITDTR
                     MQVWLPKALAAKTGTIQLKIDYAFSIPEYGTDRMGRVKTKNGWIYEIAQWYPRMCVYD
                     DVLGWNTLPYLGTGEFYLEYGDIDYTITAPSNLLIVGSGEVQNPTEVYTSSTISRINR
                     AKNSDETVTIIGAHDLGEGKWHPDKASLTWHFHCKNTRDVSWAASKAFIWDAARINLP
                     SGKKALAQSVYPAESAGDGAWGRATEYTKGCIELYSKEWYEFTYPSATNVAGQVSGME
                     YPGIVFCSLKSKGESLWGVTNHEFGHNWFPMIVGSNERKYGWMDEGFNTFLNGVDTKV
                     FNNGEYDRPADVQQTASSIFADNADPIMTIPDATQSTYWGTALYSKPAVGLNILRKHI
                     LGTERFDSAFRAYIARWAFKHPTPFDFFRTMDNVGGEDLSYFWRGWFLTTSKLDQGVA
                     EIIYPDNDPAKGALITVVNKEQMVLPVPMLIEEENGKKDSITLPAEIWQRGGSWTFLY
                     PSTSKLKKVTIDPDHDYPDINPSNNSLRGMSTKPVTKGTTANDVINNYLRAVGGINKI
                     NGINDMTYTASGTVQGQDIKFSTQYKAPDRLLLLVTVPAMNLTAQKILITDEDVALET
                     MGQPAPLDDTMKKDLKEELKPFAEMDYVKNGYRLQLAPMLEEINGSEAYVVTVTSATG
                     NVTKEYFDANTGLKLRKEAIGGPVPAVSDYSDYKEVNGILFPYTEDVNQGTEFKLTVT
                     DIKVNTGLKNEDFK"
     gene            complement(10809..11015)
                     /locus_tag="VEV83_07075"
     CDS             complement(10809..11015)
                     /locus_tag="VEV83_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44911.1"
                     /translation="MNNSTSTHSGLHAVISNLEKQKEELSAVYHSAIKAGEKLECVKT
                     LYITLQDINRRLRDLTSIHLLVTT"
     gene            11473..11700
                     /locus_tag="VEV83_07080"
     CDS             11473..11700
                     /locus_tag="VEV83_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44912.1"
                     /translation="MFQFQIRVHRRIKGTARKTLEKKSNHLLNQKLASIIDRVEKENG
                     KFKLTGKDGAYSFEAKGYSPELLKEINKLLQ"
     gene            complement(11745..12119)
                     /locus_tag="VEV83_07085"
     CDS             complement(11745..12119)
                     /locus_tag="VEV83_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44913.1"
                     /translation="MQTCVLLIDDDNEDQEIFIQQLAQYNPGIEVISASNGKDALRVL
                     SKTRPNYIFLDINMPGMGGIDVLKKIKQVQSTRNIPVFMYSTSDGFTSKSTAFELGVN
                     QYFRKPNSQNGFKLMFKEVFNN"
     gene            12385..13620
                     /locus_tag="VEV83_07090"
     CDS             12385..13620
                     /locus_tag="VEV83_07090"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HYK44914.1"
                     /translation="MSLYNTVCVIIVLTAAFGYINHRYIKMPQTIGIMIMSLVTSLVI
                     IAINWLDPALFLKPVQIIKSLDFYTLLMKIMLSFLLFAGSLHLDAHRFKKHALSIFTF
                     STIGVIISTFLVGLLFYFAAGLFNLHITFIEALLFGALISPTDPIAVLGILRQANIPA
                     SLEIKITGESLFNDGVAIVVFLTIYHIMQAGVENLSIAGVGLLFLREACGGVLLGFGL
                     GYCGYFILKSINNYKTEALITLAIVMGGYLVADRLHVSGPLAMVVAGIITGNKSMRES
                     MSPTTHDYVGKLWELIDDILNAILFLLIGLEMLVIPFTWFVFCLGLVGILIVLLSRYI
                     SVAIPIALLRYRIRLEKHAALVLTWGGLRGGISVALALSLPAGEYNNTLIAVTYMIVL
                     FSIVVQGLTIGSLVKRTRQ"
BASE COUNT         3908 a         3010 c         3135 g         3686 t
ORIGIN      
        1 gccgctgcga tgtccatcca gtacatcagg cgtccaccca tgaggttacc aaatccattc
       61 gtgtcatttg gcaacacgat ctcgttcatc accgtaacac tttcattcgt cgttttacct
      121 tccatcggca tgttttgcgc aaatatagtc agcagtttgt gctttgcgtt taaagtgtag
      181 ctggtaggct gttgcagaag atttgtcaaa cctattctgc gacctcatta aaaagcaaac
      241 cggttgtatg agttctcaac aaccggttca ccaaaaattc gtccgtttac ttaaccgctt
      301 ttatataacc gttaaatgag atcgattgcc gatcagggct tgaaacctgc aggtatgcag
      361 tgccattgtc gtacaccgtg agattgaact ccgaattata tgctttgtct cttgccttga
      421 tcgatacgtc gtagctgttt ttcttaccat tagcaacctt gtaatcaaaa tccgtagtag
      481 ttaccttgat gccaacgtcg gacgggttca taggtgctgt atatgatttt ccgtagtacg
      541 gcagatcggc actcaacgag tcgccattta cttttaacgt gtaacccggc gtcaaatgcc
      601 tgatgccgcc ggcggttggc cgcgcggtct ccgcttcgaa cacgtacgtt ttattattga
      661 ccatgtcttt tacttcagca gcggctagtt tctgcgccat tgcggccgtt gcagatgcta
      721 ttataaatga tgtaacaaaa agaaaccgtt tcatatgcac gaaattttag gatttatttt
      781 tttgatatcg aaagttagac gaaaagcttg tgtttggttt aaaaaatttc acaaaaacaa
      841 gttgtgaaaa atcaggcccg cacctcgaac ttcaaacatc aaacgtcaaa catatctttg
      901 cgcaaatctt cgatatgaat cttggatatt tctcttaccc aatgcccgtg aacgagccgg
      961 ttttaaatta tgcgccgggc tctgcggaaa gagttcaatt gaaaaaggtg ttggctgaat
     1021 taaaaagcgg agacacagac atgcccatgt atattggggg cgacgaggta cgcaccggta
     1081 acaaagttgc cttgcacccg ccgcatgaac tgcagcacac actcggttat ttccatgctg
     1141 gtgatgaagg gcacgtaagg caggcgattg aggcagccat gaaagcacgc gaagcgtggg
     1201 ccaatatgcc gtgggaagag cgtgctcata ttttcctgag aacagccgac ctgatggctg
     1261 gcaaatacag gtaccacatg aacgggacca ctatgctcgg acaaagtaag aatgcgttcc
     1321 aggccgaaat cgacagtgcg tgtgaactga tcgatttttt gcgtttcaat gtgcattttt
     1381 taagcgagat atataaacaa caacccaatt cggcgcccgg catgcataac cggatggaat
     1441 ggcgcccgct ggaaggattt gttctcgcca tcacaccttt caatttcact gcgatcggcg
     1501 ggaatcttcc aacaagtgcg gccatgtgcg gtaacgtcgt cgtttggaag cctgcacaca
     1561 cacagatctt cgcggcccag atgttcatgc ggatcttaaa agaagccgga cttccggatg
     1621 gcgtgatcaa tttgatctac gttgatggtc caacgcttgg taaagtttgt tttgcgcatc
     1681 gggattttgc aggcgtgcat tttacgggca gcaccggcgt cttcaattat atgtggaaaa
     1741 cgatcggtga aaatgcagga aaatataaat cttatccgcg tatcgtgggt gaaaccggcg
     1801 gtaaagattt tgtgcttgtt cataaaactg cagaggttga tgtggttgtg acagcgctgg
     1861 cgcgaggtgc attcgaattc cagggacaaa aatgttcagc ggcatcgaga gcatacttgc
     1921 cttcaaacct tgctgatcaa atcaaacaaa gattaacggc ggaattaaag acgatgaaaa
     1981 tgggaagtgt cgaagatttt tccaatttca tcaacgcggt gatcgatgaa aattcttttg
     2041 acaatattac ccggtatatc gaaaatgcga agagcgatcc gaatgcggaa ataattgcag
     2101 gtgggaacta cgacaaaacg aaaggttatt ttattgaacc aactgttatc gaagcaaaag
     2161 atccaaatta cgtttcgcta tgcgaagaaa tattcggtcc tgtgttgacg gtctttgtat
     2221 acgacgagaa taagtttgaa gaaacgatcg agcttgtaaa taatacttcg ccttatgcac
     2281 ttacaggcag cattatagcc cgagaccgag atgcgatcac gctggcaacg gaaaagctga
     2341 gacatgctgc cggcaacttt tacataaacg ataaaccaac aggcgccgtt gttgggcagc
     2401 aaccgttcgg cggcgcccga gctagcggaa ccaatgataa agcgggtagc atgttgaact
     2461 tatatcgctg gctaagcgca cggacgatca aagaaacttt taatccgccc acaaattatc
     2521 gttacccttt cctatcccag gattaaaaaa taaatatgcg gcatacgcgg atagtcattt
     2581 ttatcttttt ggcgatcata ggtcgttcat ttgcgcaaga aaaagttgca accgattccg
     2641 gttatttagt ttcattcgac agcacaaaaa tttattacga agtctacggc aatggttttc
     2701 ccacgctgtt ggtacatggg tttatttcta acagccagtc gtggaaacga actgctttgt
     2761 tcgacagcct ggttgcttca ggcaggaaag tgatcttaat tgatatgcgc ggcaacggaa
     2821 gatcagataa gccacatact gacgaagctt acatgaatga tgcagagaca aaagatctga
     2881 tgatgttgat cacgaagctc aagatatttc aatatgatgt gatcggatac tcgcgcggct
     2941 ccatcattac ctgccgattg atggtgtggg accgacgtat tcataaggct gtcctcggcg
     3001 gcatgggcat tgaattcaca aatcctgaat ggccgcgacg catccgcttt tacgaagcgc
     3061 tcacaacgga tacagtaccg gaactgcatg acatggtaca atacgtacaa caagctggac
     3121 tagatcagca cgcgctggcg ctacttcaga aatatcagcc gtcaacaagc atatctacat
     3181 tgagaacgat caagatacct gtgcttataa ttcacggcga cctcgacgat gacaatggct
     3241 ccgcagatca attggcggtt gtgtttcctt tcagtgaaaa agcagttgtg cccggcatgc
     3301 ataactcagc attgcaaaca cccgagtttg cacaggcagt gatattattt ttgaataagt
     3361 aactgatgtg gtgcggaagt aaaaaaaaat tgcggggcac gaaaacccga acagggttct
     3421 catcaacacg gttaatattc atcctcatta aaaagaaagt cttcctggct ggggtaatcg
     3481 ggccaaatat cttcaatgct ttcatatacc tcgccttcat cttcgagttc ctgcaggttt
     3541 tcaaccactt caatcggggc tccggaacgt atagcatagt caatcaactc atcttttgta
     3601 gcaggccacg gcgcatcttc caaatagctg gctaattcta aagtccaaaa catagcctct
     3661 taaattttgc gcaaaagtaa gtgttgtaac gaaataacca aatgcacttc gcggccagca
     3721 ctttttaaaa aaaatttttt gccggggttt ttgtttcttc gtttggaaaa caggctcatg
     3781 ttaagcgcaa aaggcattaa gaagacttat gggcaactgg aggttttgaa aggcgttgac
     3841 ctgcaaattg gagaaagtga gatcgtttgc attgttggat catccggcgc cggaaaaagc
     3901 accttgctgc acatcctggg cacactcgac atgccggaca gcggggagat tttcttaaag
     3961 gatgtagctc tccaccagtt gaaaggaaaa aagctcgcag attttcgaaa tcatcatatt
     4021 ggttttgttt ttcaattcca ccacctgctg cctgaattca cggcgctgga aaacgtatgt
     4081 attccgggct ggatcgcagg taaccagaaa aaacaaacgg aagaggaagc agttcgcctg
     4141 ctcactattc tcggccttca cgaccggctt gataataaac cgatggcgct tagcggcgga
     4201 gaacagcagc gagtcgccgt tgcccgcgcg ctgatcaaca aaccagctat cgtttttgct
     4261 gatgagccta ccggcaacct tgactccgtt catgcccgcg aacttcacca attgttcctc
     4321 cagctccgcg aacaattcaa gcagactttt cttatcgtaa cgcataacga agaactctct
     4381 gaaatgagcg acaggatact gcatatgaag gatgggaaga tcgttttgta gttcacgagt
     4441 tcaaaagttc accagtttcc gccggtgcaa actttttaaa agttatcaac taactcgtga
     4501 acctgcaaac tgtaaacttt tgaacttcta tctttgcgcc cgaaaatttt atgagcaatg
     4561 catttatcat ctttactcca tcgctttaac gaacccgaaa cgctgaaaat ggccaagctt
     4621 ggccgtgagt taagatcaca gggttttgaa gtgatcgatc tcagtcttgg ggagcccgat
     4681 tttaatacac cagaccacat aaaacaggca gctatccagg caatcgatga caattggagc
     4741 cactatacac cagttgctgg gtatcttgat ctgcggcagg ctgtatgcac aaaactgaaa
     4801 cgggataatg ggctggatta tgaaccggga aatattgtgg tgtcaaccgg tgccaagcag
     4861 agccttgcaa atacaattct tgctttggtc gataaaggcg atgaagtgat cattccaact
     4921 ccctattggg tcacgtactc ggagctggta aaacttgccg aaggaaaggt tgtcgagatc
     4981 cgcagtaagc ttgagcatgg gtttaaaatt tctccactcg aactggagca agcgatcacg
     5041 ccgaagacaa aggcattctt gttttcatcg ccatgcaatc cttccggcgc ggtgtataca
     5101 aaggaagagc tggctaatct tgcagatgtc tttcgcaggc atcctgatat cgccattata
     5161 tccgacgaaa tatatgagta catcaatttc ggcggcacgc atcaaagtat tgcacaattt
     5221 gaggatctga aagaacgtat catcatcgtg aacggtttga gcaaagcgtt tgcgatgacg
     5281 ggttggagac ttggttacat tgccgccaat gtcgagatcg caaaagccac ggaaaaaata
     5341 cagggacaat ttacaagcgg cacaaattcg atcgcgcaac gttcggcaat aacggcgctc
     5401 acagcagatc tgtcgccaag ctttgaaatg gtgaaacaat ttgctgaaag aagaaaaagg
     5461 gtattggaac tcgtggcaga agtgcccggc ctcaaatgtt ttgagccaca gggagctttt
     5521 tacatttttc cggatgtaag ctcttattac ggtatgagct acggagaaac agtgatccag
     5581 gacgcgaatg aactttgtat gtatcttctt aacaccgcgc atgtgtcaag tgtgatgggc
     5641 gacgcattcg gcgaaccgaa ctgcgttcgg ttttcattcg cgaacagcat ggagaatatt
     5701 gaaaagggat gggcaagaat taaagaagcg ctgggtaaat tgaaataagg gaaagctgtg
     5761 agctgtgagc tacgagccgt gagctgcgag caatgagcta acttcatgaa atcacattcg
     5821 gttatgagct cacagttcgc cgcacaaagc tcgaagattt tatccgccac aaggaagcgc
     5881 tgagaaaatt gtaataaagt tttgagtaac cgggctttgc tttgtcgtga tgaagccttt
     5941 acttaattcg caagtcactc tcgtgcaagt tatttttacc gggcaatcaa aaccttaaga
     6001 atggattatt ctttcatcat cctgttaatc tcaattttcg cagcgcgctt catacagata
     6061 aatgccttca gaaatttagc ggatgaggat aagggaaaag tgatgtcgaa agatattatg
     6121 cgattatcgc aggcaagcct catctttact attatcctca ttgttgcatt ttatttcctc
     6181 atcagcaaat atcctggcaa tttcagcggc attacttcgt cttttttcat ggtgttgatt
     6241 ttgcaaagag tatttgtgta tgttgtatcg aggcgacgga tggtgagtaa tggagtacct
     6301 gcatcgtacc taagcaaata ttttctttca tgggcggtga caactatcgg cgttgcgctt
     6361 ttcattttgt tctttatgtg gagcagctat aatggaccag gccagtgata aattcaggat
     6421 gtttgaaaac cgccttctta aagtgaggaa ttaagtgcgg tgaatcaggt aataaggttc
     6481 aggtttctaa cgtcattgct ttttactaag gtcataaggt tagatgtggt taggcctttg
     6541 aacctcatta ccttggtaac aacgcgaagc aaaaagtaaa ttgaccttat tacctaatta
     6601 caattgccct ggatagttac cattcgtagc cgctagcccc gccgaacctc attcccttag
     6661 taacaaggcg aaacaaaagt aaatttgacc tattacctaa ttacaatttg gctggagagt
     6721 aaccattcgc agcctacagc tcatacgttc ctaatgcaca gctctgacga aaaattccaa
     6781 atgttccaaa accgcttgct taaagtctac aggcaccaca gcaagcaggc gaagcgattg
     6841 aatgtttcgt gctatagaat ttacgatcac gatctgccgg aatttccatt cgctattgaa
     6901 ctgtatgatg acaaaattta tgttgctgag tatcgtcgcc gccatggaat gaatgaagaa
     6961 gagcacgagg aatggctgca agcatcattc gacatcatca gcaacgtgtt gcaattaccg
     7021 gttgaaaaca tttatagccg ggaaagaaga cggttgagtc accgcgaaag ccagcagtat
     7081 gaaaaacaaa gtcttgcccg ccaatttttt accattcagg aaagcggttt aaagtttctt
     7141 gtcaatctaa ctgattattt agatacgggc ttgttccttg atcatcgcat tactcgcgaa
     7201 atgattcgtt ccgaatctca caacaaaaca gtgctgaatc ttttttgcta cacaggatca
     7261 ttttctgtgt acgcggctgc aggcgaagcg gcgagcgtta cttcagtcga tctttcaaaa
     7321 acatacctgg aatgggcgga agataatttt gtgatcaatc atttgaagga cgagaaaaaa
     7381 tttcatttta ttcacgctga tgtaaagaaa tatttgaaaa tgttgaagaa gaatagtttt
     7441 gatctcatca tcatggaccc tcccactttc agcaacagta agcggatgaa ggatttcctg
     7501 gatattcaaa gagatcatat tgaccttatc aaccaggctt tattcgcttt atcaccaaat
     7561 ggagttttgt atttcagcac caactactcg aagtttcttt tggctgaaga taaaattgaa
     7621 gcatcatcta taaaggatat tactaaacaa acaactccct tcgattttga agggaagctc
     7681 aaaaggtttt gttttaaaat tgccaaacaa tagagaagta gcgcgctcga atttttccaa
     7741 ctatcaaaac ttttttatcc cgataaacga ccacaccctt ggcaaatgat ttcgttttca
     7801 gcttttatct gcatcacggt tttccactcc cgggcctgcg ccgggtttac atggcttatg
     7861 gctggcatga acttcgtata gaaactttgt gaacgctgtt tccatattag ttaacgtcag
     7921 cataccgcaa aagaatgtca aaaagtggct gttttatcaa atattttgaa ttaacgccat
     7981 ccattagttt ttaccttcgc ggcctgaatt tttcaacttt taaccctcaa cctccgctct
     8041 gtgatatttg aaaacaaaag cagatacatg aaacgtttac tggttttttt attactggcg
     8101 atcgctgtta gtggttctac gattgcgcag atgcagtcgg ttgctgattc tggtcagcat
     8161 tcaaattatg atcatcgtgc agccttcgcg ccactcttct accccagcgg aaatgaattt
     8221 cgcagtgcat ccggccagcc gggcccgtct tactggcaga acaaagcgga ctataagata
     8281 gtcgccacac tcgatacact ccaacacagg ctcactggct ctgttacgat ttcctataaa
     8341 aataacagcc ccgataattt ggctttccta tggttgcaac tcgatcaaaa catttaccgc
     8401 gcagacagcc gtggacaggc aactactccg caagcaggtg gacgctggtc caatagaaca
     8461 tttacgcaag gcgatgagtt gaaatctgtg agtcttgttt caaacggtat tgccacccaa
     8521 gccaaatata acataaccga tacgcgtatg caggtatggt taccaaaagc attggcagcg
     8581 aagaccggaa caattcagct aaagatcgac tatgcgtttt ctatcccgga atatggaaca
     8641 gaccgcatgg gacgggtaaa aacaaagaat ggatggatct atgagatcgc gcaatggtat
     8701 ccgcgcatgt gtgtctacga tgatgtgttg ggatggaaca cacttcctta cctcggcacg
     8761 ggtgaatttt atcttgagta cggcgacata gactatacga tcacagctcc ttccaacctt
     8821 ttaattgtcg gctccggcga agtgcagaat cctaccgaag tctatacatc atctacaatt
     8881 agccgcatca atcgtgcaaa aaacagcgac gaaacagtaa cgatcattgg cgcacatgac
     8941 ttgggtgaag gtaagtggca ccccgataaa gcatcactca cgtggcactt ccactgtaag
     9001 aacaccagag acgtttcctg ggccgcatcg aaagcattca tctgggacgc agcgcgtatc
     9061 aatctgccaa gcggcaaaaa agcgcttgct caatccgtat atccagcgga aagtgccgga
     9121 gacggcgcat ggggacgcgc gacagaatac acaaaaggct gcatagaact ctattccaaa
     9181 gaatggtatg aattcactta tccgtctgcc acgaatgtcg cagggcaagt ttcaggaatg
     9241 gaatacccgg gtatcgtttt ttgttcttta aaatcaaagg gagagagttt gtggggcgtc
     9301 accaatcatg agttcggcca caactggttt ccaatgatcg tcggttcgaa cgaaagaaaa
     9361 tatgggtgga tggacgaagg ttttaataca tttcttaatg gcgttgacac aaaggtcttt
     9421 aacaacggag aatacgatcg gccggctgat gtacagcaaa ccgcctcttc aatttttgcg
     9481 gacaatgccg atccgataat gacgattcca gatgccacgc aatctaccta ctggggtacg
     9541 gcgctttaca gtaagcccgc agttggactt aacattttgc ggaaacacat tctcggcacc
     9601 gaaagatttg actcagcctt tcgcgcatac atcgcccggt gggcattcaa acatcccaca
     9661 ccgtttgact ttttcagaac gatggacaat gttggcggag aggacctttc ttatttctgg
     9721 cgtgggtggt ttctcaccac ttccaaactg gaccagggcg tcgctgaaat aatttatcca
     9781 gataacgatc cggctaaagg cgcgctcatt acagtcgtca acaaagaaca aatggtcctg
     9841 cctgtgccga tgctgatcga agaggaaaac ggaaagaagg attcgatcac attgccagcc
     9901 gagatctggc aacgtggtgg cagttggacg ttcctgtatc cttccacttc caagctaaag
     9961 aaagtgacca tcgatccgga tcacgactat cctgacataa atccatcgaa caatagccta
    10021 agaggaatgt cgaccaaacc ggtaacgaaa ggaaccacgg caaacgacgt tatcaacaat
    10081 tatttgcgtg ctgtgggcgg tattaataaa atcaatggca ttaatgatat gacatacaca
    10141 gcgtcgggca ctgtacaagg gcaggacatt aagttcagta cgcagtataa agcacccgac
    10201 cggctgttgc tgttggtaac cgtacccgct atgaatctta ccgcgcagaa aatactgata
    10261 acggacgagg acgtggcttt ggagacaatg ggtcaaccgg caccgctgga tgatacaatg
    10321 aagaaagacc taaaagaaga actaaagcca tttgcagaaa tggattatgt aaagaacggt
    10381 taccggcttc agctcgcacc gatgcttgaa gaaattaacg gcagcgaggc atacgtggtt
    10441 actgttactt ctgcaaccgg aaacgtaaca aaggaatatt tcgatgcaaa caccggtttg
    10501 aaattgcgaa aagaagctat cggcggccct gtgcctgctg tttccgacta ctctgattat
    10561 aaagaagtga acggaatcct tttcccttac acagaagatg taaaccaggg cacagaattc
    10621 aaactaacgg tgaccgacat aaaagtaaac accggcctga aaaacgaaga ttttaagtga
    10681 ggaaggcagt ctgcgtggac caccttttta tcggggcttc gaggagaata gaaactaaga
    10741 acggcgttat ataacaccgc aatatgattg aggaagactc tcaacaatga tttaaaactt
    10801 ctcaaaaatt atgtggtcac taacaaatga atgctagtta ggtcccggag tctccggtta
    10861 atatcctgga gcgtaatgta aagcgtcttc acgcattcca gtttttctcc ggctttaata
    10921 gcagaatgat acacagcaga aagctcttct ttttgctttt caagatttga tatcacggcg
    10981 tgtaatcctg aatgggtaga tgtcgaattg ttcatagtaa gcaattattt taaaaaagag
    11041 tgaacctcta acgtcgcaaa tttcataccg tgtttttgaa ggcgcagaga ccggaaaaaa
    11101 aatttccgga aaggtaacct tgagccaaga aaatagaaca tttgggcggt atcattcagt
    11161 caactcaaat gttttgatga cttgctgtag caaagaatcg gagggttcat agttatcatt
    11221 tcagttgcag aaatgttgcc gtgtcaaatt gtacttgtag ttaacaaaac tcatttcgca
    11281 attgtcagtt gagcgcgtgt atccgaagat ctcattgtta agcacgcgcg ggcattttcg
    11341 acggccactg gcatttcgaa acaatcacgg atttagttaa cggcagcaca acgtagcagc
    11401 tttggaaaaa ataaacgatg cgcagaaaac aaaaggcatc gttcttgcat ttttggtact
    11461 aatcctaaac gtatgtttca atttcaaatc cgggttcatc gacgtatcaa aggaactgca
    11521 aggaaaacgc tcgagaaaaa aagtaatcac ttgttaaacc aaaaattggc gtccattatt
    11581 gacagagtgg agaaagaaaa cggtaagttc aagctgactg gaaaagacgg cgcctacagt
    11641 tttgaagcaa aggggtactc gcctgaattg ctgaaagaaa taaacaagtt attacagtag
    11701 ctcgttccca tctgaccatc acagcaggaa agacgatttg ggaactagtt gttgaacact
    11761 tccttgaaca tgagcttaaa accgttctga gaattcggtt ttcgaaagta ttggttcacc
    11821 ccaagttcga atgctgttga tttactggta aatccatcac tggtactata catgaagacc
    11881 gggatgtttc ttgtgctctg aacttgttta attttcttca acacgtctat accgcccatg
    11941 cccggcatgt tgatgtccag aaaaatgtag ttgggcctgg tcttcgacaa aacacgtaag
    12001 gcatctttgc cattagaagc agaaatcact tcaatgcccg ggttatactg cgccagttgt
    12061 tgaatgaaga tctcctggtc ttcattgtcg tcatcaataa gtaacacgca cgtttgcata
    12121 aagctccttt tttgtaatgg taaaacagtc gtttcgggat ataataaaga tcgcaaaaat
    12181 ttttatttga gagcggacgg ccgatatttt ttcttgcaat cttaattccg aataattgca
    12241 aatttacccc gacgggattg gaggccctta acaacagcaa ctctttggcc cggaccgcca
    12301 gaggcaaata gatgccttta ctaatctgta tttgcgacaa gcggttactt ttgcctggta
    12361 ctcatcattt atctaacggc ttacatgtct ctttacaata ctgtctgcgt aatcattgtg
    12421 ctcaccgcgg ccttcggcta tatcaatcat cgatatatta agatgccgca aacaattggc
    12481 attatgatta tgtcgctggt aacctcgctc gtgatcattg ctatcaattg gctggaccca
    12541 gcgttgtttc tgaaaccagt gcaaataatc aagtcgctcg atttttatac actattgatg
    12601 aagatcatgc tgagcttttt attgttcgca ggttcgttac atcttgatgc acacaggttc
    12661 aaaaaacatg cgctgagcat ttttactttt tcaaccatcg gcgtgatcat ttcgaccttc
    12721 ctcgtgggac tgctttttta ttttgccgcc ggcctgttca acctgcatat tacatttatt
    12781 gaagccctgt tatttggcgc gctgatatca cccacagatc ctattgccgt attgggaatt
    12841 ttaaggcagg ccaatatccc cgcctcgctt gaaataaaga tcacgggtga atcccttttt
    12901 aacgacggcg tagccatcgt ggttttcctc acgatttatc atatcatgca ggcgggcgtc
    12961 gaaaaccttt caatcgccgg tgtcgggttg ctttttctgc gcgaagcatg tggtggtgta
    13021 ttgcttggct tcgggcttgg gtattgcggt tactttattc ttaaatcgat caataactac
    13081 aaaaccgaag cgttaataac gcttgccatc gttatgggag gctacctggt cgccgaccgg
    13141 ctgcacgtgt caggccccct tgccatggtg gtcgctggta tcataacggg caacaagagc
    13201 atgcgcgagt cgatgagtcc taccacgcac gattatgttg gtaagctgtg ggaactgatc
    13261 gatgatatcc tcaacgcaat tttatttctg ctgatagggc tggaaatgct ggtaatacca
    13321 ttcacttggt ttgtattttg tctcggcctg gtaggtatac tgatcgtgct gttgtcgagg
    13381 tacatttcgg tagctattcc gatcgctctt ttaaggtata ggatccggct tgaaaaacat
    13441 gcagcgctcg tgcttacgtg gggcggatta agaggtggta tctccgtggc gctggcgctg
    13501 tcgttacctg caggggaata caacaatact ttgattgcag taacgtatat gatcgtttta
    13561 ttctccatcg tagtccaggg attaacgatc ggcagtttgg tgaaacgaac caggcaatga
    13621 ccgcgcggaa caatttggaa ggcttatcga aagagcgatc aacaattaca gcaatcggtt
    13681 ccctcttgtt ttggcggaca tggtatattt ccgaagctgc aaaacacgca gcaatcgcc
//
LOCUS       DASQJI010000250        21364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_639263,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000250 DASQJI010000000
VERSION     DASQJI010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21364
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639263"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VEV83_07095"
     CDS             complement(<1..701)
                     /locus_tag="VEV83_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HYK44915.1"
                     /translation="MPEFDTSHVKSVVLLGHAGTGKTTLAECMLYEAGLLSRRGSVQE
                     RNTVGDYHELEQERGNSIFSKLLHTKWRGYKINILDTPGYDDFVGEVISALRVADTGV
                     MLLNAEMGVEVSTDIIWEYTEQFKTPMIFAVNKLDEDDADFDRTVSEAKNHFGNKVQV
                     VQYPRQQGAGFHEIIDVLRMTMYKFKDSGGKPEKLPIPDEEKEKAEKLHRELVEAVAS
                     NDEGLMEKYFDKGEL"
     gene            complement(768..1151)
                     /locus_tag="VEV83_07100"
     CDS             complement(768..1151)
                     /locus_tag="VEV83_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44916.1"
                     /translation="MVQTDISQLVRECNGWRETLRSYRDELHQMQNSLQTAVNHPLSK
                     DEQTELEHLQNQLHIQLINVHDLKQAVKKHDRKLSHEVAGQNDESFSENISAYHESLF
                     ENYQSLENTLGELRTDLKQFVTTIR"
     gene            1315..2250
                     /locus_tag="VEV83_07105"
     CDS             1315..2250
                     /locus_tag="VEV83_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HYK44917.1"
                     /translation="MAIILISGGTGMIGSALQKFLVEKGHEAIILVRPGSRSKNKNSD
                     AHVTYADWNVESGDIDKEAIERADHIVHLAGANVGEKRWTKKRKKEILESRTTSSALL
                     VRAMGEIPNKIKTVISASGVGWYGPDTKESRQKGFTEDAPPFNDFLGQTCKQWEESIQ
                     PVTNLNKRLAIFRFGVVVSEGGGALDEFKKPLKFGIATILGDGKQVISWIHIYDLCRL
                     ILFAIENEKFEGVYNAVTPKPVSNKELVLLLAKKIRRKSFIPVHVPAFTLRWALGEMS
                     VEVLKSTTVNDEKIRRAGFTFLYPSIESALENLQL"
     gene            complement(2278..3072)
                     /locus_tag="VEV83_07110"
     CDS             complement(2278..3072)
                     /locus_tag="VEV83_07110"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HYK44918.1"
                     /translation="MRSTASIKSHPVHPILVAFPIAFFVGTLLFDTLGFIFGRPDFSG
                     TASYLNIAGVIAALLAAIPGVVDYFFTVPPKSSGKKRATTHGILNVTNVIIFFIAWKL
                     RTDISSSALIVIEVAGIIILSIAGWLGGTLVYRNQIGVDPRYANAGKWKEEHIKHSRG
                     DIQVATVDELQTNQMKLIHVDGKRIVIGKTENGYVAFNDHCTHKGGSLAGGAMICGTV
                     QCPWHGSQFDVRTGNVRNGPAKEGIMCYDLKEENGKVLLAASALRG"
     gene            complement(3139..3474)
                     /locus_tag="VEV83_07115"
     CDS             complement(3139..3474)
                     /locus_tag="VEV83_07115"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK44919.1"
                     /translation="MMKQPLYIVLFLTAIASCAVRRSEPVKAETFVPANEDIANGEKI
                     FMANCEKCHPGGEGGLGPAINSNPAPQFIKRFQMRHGLGVMPSFKQNEISKNDLKDIS
                     QFLRAWKSY"
     gene            complement(3475..4923)
                     /locus_tag="VEV83_07120"
     CDS             complement(3475..4923)
                     /locus_tag="VEV83_07120"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYK44920.1"
                     /translation="MKKMMLSFFCFSLVLSGCYKMRASNGGGQIQPPKERIISATDIA
                     LAPGYKIEAIAKGLTFPSGVTFDDKGQLYVIETGYSYGEVWAEPKLLRVENNGTQTLI
                     AKGGRNGPWTGVTFYDGYFYVAEGGESEGGKILRISPSGEIKTIVDNLPSLGDHHTNG
                     PVVKDGYIYFGQGTATNSAVVGPDNASFGWLLRHKDFHDVPCEDVVLNGTNYRSDNVL
                     TEDAADTATTGAYSAFGTSTAAGQIIKGNIPCNGAIMKIPIEGGKIQLVAWGLRNPFG
                     LAFSPDGKLFVTENAYDDRGSRPVWGAADVLWQVEQGAWYGWPDFSAGKPIANDEEFK
                     VPGKHPVKAVLQKYPNTPPKPVAIFGVHSSSNGFDFSTNANFGFAGQAFVAQFGDMAP
                     NVGKVSYPVGFKIVRVDVKDGVVRDFAVNKGKRNGPASWLEKGGLERPVAVKFDPHGE
                     ALYVVDFGILTMTAKGPQPQTNTGVIWKITKQ"
     gene            complement(5174..5953)
                     /locus_tag="VEV83_07125"
     CDS             complement(5174..5953)
                     /locus_tag="VEV83_07125"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYK44921.1"
                     /translation="MLHLLKLEWLKVKNYRAFWVFLALYIVGLFSINYIAFQLQGEVK
                     KNNVPLTIFPYDFPAVYQTIAWVSSWFLYFPGMIMILVITNEYNYKTHRQNIIDGLTR
                     QQFVVAKILFGLAIALATTISCFLIAIYFGGTYSGKISFSGIAYIGYSFIQTLCYLFL
                     AMILAVLMRRSGLAMAVFFLYGLVFEQLLGGIIDYKILNDGTTRFYFPLEASDTLIPI
                     TFGKQIIYNSAPSDTVLVITSIVYISLFVFFSLRKFQTDDL"
     gene            complement(6010..6900)
                     /locus_tag="VEV83_07130"
     CDS             complement(6010..6900)
                     /locus_tag="VEV83_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK44922.1"
                     /translation="MNVLELNGITKHYKTVTALNNVSFTVPEGSVFGILGPNGSGKTT
                     LLGIILDILKPSAGSFLLMGKPANAQLRKHVGTLLETPNFYHYLSAEKNLRIAAHIKG
                     KGFNQVDNVLQTVGLYQRKQSKFNTYSLGMKQRLAIASCLLGDPEVLIFDEPTNGLDP
                     VGIAEIRELITRLAGEGKTIIMASHLLDEVEKVCTHVAILKTGNVLTAGAVDEVLVTD
                     EIVELSASDITALESALQQMGGFTSIKKVNNVLQILYPNGSANPAAINQYCFQKNIAL
                     NYLRLKKKSLETKFLELTNK"
     gene            7121..8377
                     /locus_tag="VEV83_07135"
     CDS             7121..8377
                     /locus_tag="VEV83_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HYK44923.1"
                     /translation="MSPLSERMRPTKLDELEGQEHLVGKGSILRTAIENSNIPSMIFW
                     GPPGSGKTTIANIIAHTLNVPFYQLSAISSGVKEVREVIEKAKQQSGVILFIDEIHRF
                     NKAQQDALLGAVEKGIITLIGATTENPSFEVISALLSRCQVYVLKPLDEADLMHVLQK
                     AMEQDEVMKKYEIDLKETTALINISGGDARKLLNLFELVVTSRKPGRIVISDEFVMDV
                     AQKRIALYDKQGEQHYDIISAFIKSLRGSDPNAAVYWLARMIEGGEDVKFIARRMLIL
                     ASEDIGNANPNALLLANATFDAVNKIGWPESQLILSQCAIYLASSPKSNSATTAIGAA
                     SSAVKQFGDLSVPLHVRNAPTKLMKDLDYGKGYKYSHSFEGNFEEQEYLPKEISGTKF
                     FDPGNNAREDEMRKFLKSLWRDKYGY"
     gene            complement(8380..8892)
                     /locus_tag="VEV83_07140"
     CDS             complement(8380..8892)
                     /locus_tag="VEV83_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HYK44924.1"
                     /translation="MEDHIEHLENDEAIKKVKELAEKADTCLFCTNIRTGQPFSARPM
                     STQEVDDEGNLWFLSDKESNKNMELKEDDHVQLLYSASNHAGFLNVFGKATILYDRQK
                     IKDLWKPLIKTWFQEGEDDPNISVIKVEPQEGYYWDTKHGKLVAFFKMFASVISGKTM
                     DDSIEGTLKV"
     gene            complement(9006..9758)
                     /locus_tag="VEV83_07145"
     CDS             complement(9006..9758)
                     /locus_tag="VEV83_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HYK44925.1"
                     /translation="MTKLLCLALGALSLNCTKENSKTVANSAAASNATATTIQFSGYT
                     WNVKDGSNLGPGPNNWSGNNVWVDANGFLHLKISKDPATGKWNCAEVSTQQTFGFGTW
                     QFWVEGSIDKMDKNVVLGLFNYSGNDGFDEMDIEWARWGNKRYPNCNYTVWPAQQGFS
                     NFSFTKEIALSGTNTTQRFTRTSNSVFFQTLSGFTDDNSNQLVTATCSNPPNSISTLS
                     MPAFINLWLFQGRAPSDRKPVEIIIHKFSYTP"
     gene            complement(9824..10699)
                     /locus_tag="VEV83_07150"
     CDS             complement(9824..10699)
                     /locus_tag="VEV83_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HYK44926.1"
                     /translation="MQIKDLSKIHQLITDLFEWPSKRSDWEQYKLSQDQIDFFNENGF
                     LGGIKMLDEKQIERLRNELDGLTDPASPGHELFYEFHSNESSDASTILFHALGAWRIA
                     PAYHDVLWNPRFLMAASQLLGNVPVRFWHDQLFYKPAKKGGVVAWHQDYSYWTRTKPL
                     AHLTCWCGLDDSTEQNGCLQYVPGSHRWGLVDKPELAGDLMGIMNYLTPEQQHEFHPV
                     PVETKAGEAIFHHPLTLHGSGENKSDQPRRAFVINVFADGVKSDSDEELLSGVPVIKK
                     GEKMEGQFFPLLFQN"
     gene            complement(10781..11191)
                     /locus_tag="VEV83_07155"
     CDS             complement(10781..11191)
                     /locus_tag="VEV83_07155"
                     /inference="COORDINATES: protein motif:HMM:NF025491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4293 domain-containing protein"
                     /protein_id="HYK44927.1"
                     /translation="MIQRIQTIWLLFASACAFLTLKFPFYYIGPHPNLPSDQFNATTN
                     MILLLLTAILGTLCLFTVFVFKQRNLQLWLTVLALVISVLNIFLYFSYKKNYTGGGLA
                     LTSVFAFLVPIFLFLAARGIYKDRKLIKSMDRLR"
     gene            11297..12619
                     /gene="ffh"
                     /locus_tag="VEV83_07160"
     CDS             11297..12619
                     /gene="ffh"
                     /locus_tag="VEV83_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HYK44928.1"
                     /translation="MFNNLTERLEGAFKNLKGEARINELNIANTVKDIRRALIDADVN
                     YKIAKEFTDRVKDKAVGEKVINAISPGQLMVKIVQDELTELMGGQEAEFQVSGNPAIV
                     LIAGLQGSGKTTFSGKLANYLKTQKKSPLLVAADIYRPAAIDQLKILGEQIGVDVYSE
                     PETKDAVVIAENAIREAKSKNKNVVIIDTAGRLAIDETMMTEVANIKSAVNPSEILFV
                     VDSMTGQDAVNTAKAFNDRLDFSGVVLTKLDGDTRGGAALSIQYTVHKPIKFVSNGEK
                     LDALDVFYPERMAQRILGMGDITTLVEKAQAQFDEVQAKKLEKKIRKNQFDFQDFHDQ
                     LQQIKKMGNLKDLMAMIPGVGKAIKDIDISDDAFKGIEAIIGSMTPFERANPDVINQG
                     RRQRISNGSGRNMEEVNGFMKQFEQMKQMMKMMNKMPMSGMRMPGMRR"
     gene            12734..13171
                     /gene="rpsP"
                     /locus_tag="VEV83_07165"
     CDS             12734..13171
                     /gene="rpsP"
                     /locus_tag="VEV83_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HYK44929.1"
                     /translation="MAVKIRLQRHGSKKRPFYFIVVADARAPRDGKFIQKIGTYNPLT
                     VPATIQLDRQKALEWLHKGAEPTDTVRRILSFKGVLYLKHLLRGVKLGLFDEAAAMQK
                     FQKWHEEHEAHMKRRSEEHRKARTGNRPQFAAKKVETQNSTEV"
     gene            13292..13795
                     /gene="rimM"
                     /locus_tag="VEV83_07170"
     CDS             13292..13795
                     /gene="rimM"
                     /locus_tag="VEV83_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611106.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HYK44930.1"
                     /translation="MGKLVATHGFKGEMVLKHVLGKQSDFKNVEAIFIEDPRDAYLPF
                     FHEKSIPKNISETIIKLEGIDTKEAAVKFLQKKVWLQKNDFEKLVSKTAPVNLIGFTV
                     VENGKSLGAVEAVIEQPLQVLLQIRIDSAEVLIPLHDQTLKKIDRKKKEVHVILPEGL
                     LDIYLQR"
     gene            complement(13801..14775)
                     /locus_tag="VEV83_07175"
     CDS             complement(13801..14775)
                     /locus_tag="VEV83_07175"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HYK44931.1"
                     /translation="MPTYPNRQFLDFEQPIKELYEQIDQTKKLAEKNSKIDYSQTIQQ
                     LEASIEERRKEITEHLTPWQRVQLSRHPDRPYTLKYIEKMVTNFIELFGDRNVKDDKA
                     MVGGLGELDGQTVMIIGQQKGINTKMRQQRNFGMANPEGYRKALRLMKLAEKFNKPVV
                     TLIDTPGAFPGMEAEERGQGEAIARNIYEMIRLRVPVVCCIIGEGASGGALGIGVGDK
                     ILMMENTWYTVISPESCSSILWRTWDKKEVAAEQLKLTAIDMKGFGLVDEIVPEPEGG
                     AHWNYNEAAQILKSYIVKAINEIKDIPADRRIQMRIDKFGRMGEWQEQ"
     gene            14913..15125
                     /locus_tag="VEV83_07180"
     CDS             14913..15125
                     /locus_tag="VEV83_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44932.1"
                     /translation="MILLKPCPPCCTSTPSTYPSIYVPDDFWTYGKSKKLMVLQTIAA
                     NRTDLADTLSEPIATLEGGTDLVRGV"
     gene            complement(15294..20906)
                     /locus_tag="VEV83_07185"
     CDS             complement(15294..20906)
                     /locus_tag="VEV83_07185"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44933.1"
                     /translation="MKKILRLALTQLLTCFMISSFSQTNITYTTPGTFTWTPPAGVTS
                     VTMQMWGAGAFGLVGSNSGGGGAFVQTTAIPVTFGTTYDIVVGSGGSNPGGSTSFGPH
                     GGSAIVTAQGGSPSGTFIAGGAASSGPYVAVSYHGGSGAFTADFFSSAGGGAGAGTCQ
                     NGADGSAGNGYGVGQCGGGSGGNPAGTVQGVAPGGGGAAVFGISDLSGGNGKIVLTYT
                     CSPGSPGTIGTTHTITYPPELIPDSITNIVSPVFPAGVTIGWQQSTNNINFVASKTPN
                     NTTGYRIDSDSLLTTTYYRRGNNACTSDGSLSNWSDTVKIVVFTSANGRNGQISGYVQ
                     TNLGSPIKDRKVFVQSLTPLRGRPVGFLDSAYTDQQGKFFVDSVFYGDKFNGDSATVR
                     FKVYPDTANGHKYNPPSREISLTLSSHTYDFGINFPFQDITVFAVTGQVTQVCKQCLD
                     KNGVVKNITGPLDSVRIVGIGVNNDITNNEKDSSTTRYLNPPGQYGRYSLTFKQADQY
                     TITPSFRNHKFVPADSIIIVNSNVTNVNFNDTTTHTISGFYGAGCGDLIGTAVLEFDD
                     VLLDSAGQPRASLFKKQVTTKQNGQYSIRLPARKYIVKIISLTVKDSLDPSTTQAVIK
                     NYFKALPPASLTRDITNGDTTLDLIYHRAPQIAVLGLYDDSSRIQTCAAFKNYDFWPQ
                     GVRRPITFKVYQGPVSRGCLLDTGRVFITTDINNTVANYQHDTVNLVGGIGVDSLVAA
                     QPNIVKDTTGTYSKRFTATYTDILNRSVSTDNANPKLPIIVVTGAAIDPSGTNFVTVS
                     PQIPFLVLHDPPGSLSYAQWTKSVKSSQAMSFRAQKEETTGGYVNVKVGLSEILGMFV
                     EIPLSFWVAIDNKFSTTNSTSNTTETVITNTSEQSLQTAADVAYTASDADLVYGAALN
                     INYKVGTEIEWDSTHCAILDPRPVMVMDIKNDTTSFLYTQGYIKGQEIPRLQFAAAAT
                     KNPDSAAYFNNQIGVWQQLVDNNERNIREGSVLQNISFSNGTTQTFSNTLENSTRNTY
                     DFDLSLDKDFAISTGFDIAGIGLDGGFNVGFKMTTGGSVTTETSTSTTTSYTLADNNA
                     GGPTYEGDYLSVNVKKDPVYGTPMFETVAGGTQCPHEEGTIALDRPLLTAGVTTKTNV
                     QKDTASFTVYMNNLSQDVTVGGARPYVLFVNAATSSGATVRLNGADGFNGVTFPIPNN
                     GGQLPITVDVIRNTANGVYNYDNIQLIMSDPCFSPVVEQFYSNAHEYSTIELSADFQS
                     GVSGVTLVTPANNWVANMFSNNAVPVTFNGYDTSKLVSIGFEYTVPGSGIWKTAFTVQ
                     KNNLGSTSTTKSWNISKIVDGPYNVRLKVTDKNNNIVYCKIAKGRIDRQPVQLFGTPQ
                     PASGAYVAGTTISYSYTDKIFTPFVNSAVNMWDMTANSNVPVDLSGFLNTIIIVPRTS
                     ITNNIGHLYRVIADSIYDLFGNVRTKPDTMYFTVSPSNFGTGPNTLNITANKTSIYED
                     DKGSINVRFTRNTKDTLPTAIYYNISGTANYGTDYNVLYNAGQTAATGINGAEGTIIL
                     PKDSLSVNMYIKPINDSILAPNKILRLTLSPGGNYSIGSNFSITDTILNHNTVKPIIQ
                     ASGLTTFCSGDSVTLSTANKVNGVSVKSYLWSTGAKTQSIVVKTSGSYTVKVTDKNGL
                     IGYSDPTVVTVTCGAPVNLAATPLTITNAALHWDVQPCAKKYVVRYRKLGNTKWLTDT
                     VNTNLDTLKTLTANTTYEWQVATICQYPVIIISSYTVGTNFTTPVSLGAFAVTGTDDH
                     SRANAGDGFSALIYPNPAFAIANVDVKNAKGPYSVVVTNLQGVVLWKAEKVNDSSVRI
                     PLASLARGIYMVVVKDELHSGTLRLMKQ"
BASE COUNT         5715 a         4775 c         4814 g         6060 t
ORIGIN      
        1 tccaattcgc ccttgtcgaa atatttttcc atcaaccctt catcgttgct ggcaaccgct
       61 tccacgagtt cgcggtgcag tttttcagct ttttcttttt cttcatcggg tatcggtaat
      121 ttttcaggtt tcccacctga gtccttaaac ttgtacatcg tcatgcgcaa tacatcgatt
      181 atttcatgaa agcccgcgcc ttgttgtcgc gggtactgca cgacctgtac tttatttcca
      241 aaatgatttt ttgcttcaga caccgtgcgg tcgaaatcag catcatcttc atcgagctta
      301 ttcaccgcga atatcatcgg cgttttaaac tgttcagtat attcccaaat gatatcggtg
      361 ctaacttcca cacccatttc tgcattcagc agcatgacgc ccgtgtctgc aacacgaagc
      421 gctgagatca cttcgcctac aaaatcgtcg taccccgggg tatcgagaat gttgatcttg
      481 tagccgcgcc atttggtgtg cagcagttta ctaaaaatgg aattgccgcg ttcctgttcc
      541 agttcgtggt aatcgcccac tgtatttctt tcttgaacag aaccgcggcg gcttaacaat
      601 ccagcttcat atagcataca ttccgctaat gtggtcttgc cggtgccagc gtggcccagc
      661 aagacaacag attttacgtg tgacgtatca aattcaggca tgacaataat ttttttgagc
      721 ggaagcccgc tcacttgttg taagttaaat acccgaaggg atcggcttta tcgaatcgta
      781 gttacgaact gtttaaggtc cgtgcgtagt tcgcctaaag tattttcaag cgattgataa
      841 ttttcaaata aactttcgtg gtacgcagat atgttctctg aaaaactttc gtcgttttgt
      901 cccgccactt catggctcaa tttgcggtcg tgctttttta ccgcttgttt aagatcgtgg
      961 acgttgatca gctgaatgtg taactggttt tgcagatgtt ccagttcagt ttgttcgtct
     1021 ttggataatg gatgatttac agctgtctgc agggagtttt gcatttgatg caattcgtcg
     1081 cgataggaac gcaatgtttc tctccagccg ttgcattccc gcacaagctg tgagatgtct
     1141 gtctgaacca tagcatttaa aatttaagtg aagtaatttt ttgcctcggc tgacggtcgg
     1201 ggcaagcatc tattgagtcc caaattagaa cttatttatt taaattgtct gataaatttt
     1261 ctttaaaagc aaactctttt atttagaatt cattagggca atatatttgg cgaaatggca
     1321 ataatcttga tatcaggcgg caccggaatg atagggtccg ctttgcaaaa atttttagtt
     1381 gaaaaaggac atgaagcgat catattggta aggccaggat caagaagtaa gaacaaaaat
     1441 tctgacgcgc atgttactta tgctgattgg aatgtcgaat ccggagacat cgataaggaa
     1501 gccattgaaa gggcagatca tatcgtccac cttgcaggcg ccaacgtcgg cgaaaaacgc
     1561 tggacaaaaa agcgcaagaa agagatatta gaaagccgca cgacaagcag cgctttattg
     1621 gttcgtgcga tgggcgaaat acccaataag ataaaaacag taataagcgc ttccggagtt
     1681 gggtggtacg ggcctgatac aaaagaatca agacagaaag gttttacaga agatgctcct
     1741 ccattcaatg attttttggg ccagacgtgc aagcaatggg aggagagtat tcaacccgtt
     1801 acaaacttga ataaacgact tgcaattttt cgatttggcg tcgtggtgag cgaaggcggt
     1861 ggagcgttag acgaattcaa aaaaccactg aagtttggca tcgcaacaat actcggtgat
     1921 ggtaaacagg tgatcagttg gatccacatt tacgacctgt gcaggctgat attatttgcg
     1981 atagaaaatg aaaaattcga gggcgtttac aatgcggtca caccgaagcc tgtaagcaat
     2041 aaagagctcg tattacttct tgcaaaaaaa attcgtcgca aatcatttat cccggtccat
     2101 gtgcctgcat ttacgctgag gtgggcactt ggtgagatga gtgttgaagt tttgaagagc
     2161 acgactgtca acgacgaaaa aattcgaagg gctggtttta cttttttata tccgtcgatc
     2221 gaatcggcgt tggagaattt gcaattgtaa gcagtatact tagaaaaatt ctatcgctca
     2281 cccgcgaagt gcggatgctg ctaataaaac ttttccattt tcttctttta gatcataaca
     2341 catgatccct tcttttgccg gcccgttcct tacgttcccg gtccttacat cgaactggga
     2401 cccgtgccac ggacattgca ccgttccgca gatcatcgct ccaccggcaa gcgagcctcc
     2461 tttatgcgtg caatggtcgt tgaatgcaac atacccgttc tcagtcttgc ctatcacaat
     2521 acgttttcca tcaacatgga tgagtttcat ttgatttgtt tgcaattcat caactgtcgc
     2581 cacttgtata tcccctcgtg aatgtttgat gtgttcttct ttccatttcc ccgcattcgc
     2641 gtatcgcggg tccacgccga tctggttccg ataaaccaaa gtgccaccca gccagccggc
     2701 gatcgataaa attataatgc cagcaacctc aataacgatg agggctgagg aagaaatgtc
     2761 tgtgcgcaat ttccaggcga taaaaaaaat tattacgttg gtcacattca gtatcccgtg
     2821 agtggtcgct ctcttttttc cagaactttt tggaggtact gtaaagaaat aatctaccac
     2881 tcccggaata gccgcaagaa gtgcagcgat cacgccggct atgttgaggt aggatgccgt
     2941 tcccgaaaaa tcaggtctgc cgaaaatgaa accgagggta tcaaaaagaa gtgtccccac
     3001 aaaaaaggca attggaaaag cgaccaatat ggggtggact ggatgcgatt ttatacttgc
     3061 tgtgcttctc atagaattgc atttaatgtg accggaattt ctttgcgcat tgcaatgctg
     3121 tgcgtccgtt gacagcagtc aatacgattt ccatgcacgc agaaattgtg aaatgtcctt
     3181 caaatcattt tttgaaattt cgttttgttt aaatgatggc attactccga gcccatgtct
     3241 catctggaac cgctttatga attgaggcgc agggttcgaa ttgattgcgg ggccgaggcc
     3301 gccttcaccg cccgggtggc acttctcgca attcgccatg aagatttttt caccattggc
     3361 tatgtcttcg tttgccggca caaaagtttc cgcttttacc ggttcggatc ttctaacagc
     3421 acaagaagct attgccgtaa gaaataaaac gatgtataac ggttgtttca tcatttactg
     3481 ttttgttatt ttccaaataa caccagtatt cgtttgcggt tggggtcctt tcgcggtcat
     3541 cgtcaggatg ccaaagtcca ccacatacaa agcctccccg tgcgggtcga atttcacagc
     3601 aacaggtctc tctaacccac ctttttcaag ccaggaagca ggaccatttc tctttccttt
     3661 attcactgcg aaatctctta cgacgccgtc ttttacatcc acgcggacga tcttaaagcc
     3721 gaccgggtat gacacctttc cgacgttggg cgccatatct ccaaactgtg ctacaaaggc
     3781 ttgtccggca aacccgaagt tggcgttcgt tgaaaaatca aatccattcg atgaggagtg
     3841 aactccaaaa atggcaacgg gcttgggtgg tgtgtttgga tatttttgaa gaactgcctt
     3901 aaccgggtgt ttgccgggca ccttgaattc ttcgtcgtta gcaatgggtt tacctgccga
     3961 aaaatctggc cacccatacc aggcgccttg ttcaacttgc caaagcacat cagcggcgcc
     4021 ccatacaggt ctgctgccgc gatcgtcgta cgcgttttct gtcacgaata attttccgtc
     4081 aggagaaaat gcaagtccga aaggatttct caagccccat gcgacaagct ggatctttcc
     4141 accttctatc ggaattttca tgatagctcc attgcacgga atatttcctt taataatttg
     4201 tcccgccgca gtggaggttc caaaggcgga ataggctccg gttgttgcag tatcagccgc
     4261 atcctccgtc aacacgttgt ctgaacggta gtttgttccg ttaagcacaa catcctcgca
     4321 tggaacgtca tgaaaatctt tgtgcctgag aagccatcca aaacttgcat tgtcgggacc
     4381 tacaactgct gaattcgttg cagtaccctg gccgaaataa atgtatccat ctttcacgac
     4441 cggcccgttc gtatgatggt caccaagact cggtaaatta tcaacgattg tttttatttc
     4501 acccgacgga gagatgcgga gaattttgcc accttccgat tcgccgccct cagcaacata
     4561 aaaatatccg tcataaaatg taactcctgt ccaggggcca tttcgtccgc cttttgcgat
     4621 cagcgtttga gtcccattgt tttcaacccg aagcaatttt ggttcggccc acacttctcc
     4681 atatgaataa ccggtctcga tcacatacag ctggcctttg tcatcaaaag tcacaccgct
     4741 tggaaatgtg agaccttttg cgatcgcctc gattttatac cctggtgcca gcgctatatc
     4801 ggtcgcactg ataattcttt cttttggcgg ttgaatttgt cctccgccat ttgaggctcg
     4861 cattttatag caacctgaaa gaaccaggga aaagcaaaaa aatgaaagca tcattttttt
     4921 catagacgcc ggtttaagtt cgataaggaa aattgtttag cctttttcgt tggagcttcg
     4981 gactcagttg ttacatctca tctacacatt gcctgtatgc tcacctgaat taatcaccgt
     5041 aataaaaagg gaataatgaa ttgtaagcgc tctcatgttg tacggatccg aggccgggga
     5101 aatgcctcta aatatgtatg gccgggctat gtaaacgtct gcaaaaacta tacctcaagc
     5161 agctatgaac cgctcacaaa tcgtcggttt gaaactttct tagggagaaa aagacaaaca
     5221 aactgatgta aacgatactg gtaattacaa ggacggtatc ggaaggcgcg ctgttgtaaa
     5281 taatttgttt gccaaatgtg atgggaataa gggtatcact cgcttcgagc ggaaaataaa
     5341 aacgggtggt gccatcattc aggattttat aatcgataat cccgccgagt aattgctcga
     5401 ataccagccc atatagaaaa aacacggcca ttgcgaggcc gctgcgccgc ataaggacag
     5461 ctagtatcat cgcgagaaat aagtaacaga gggtttggat aaaactgtag ccgatgtaag
     5521 ctatacccga aaatgaaatt tttccgctat aggtaccgcc gaagtaaata gcgatcaaaa
     5581 aacaactgat cgtcgttgcc agcgcgatcg ccaggccaaa caaaattttt gcaactacga
     5641 attgttgcct cgttaatcca tcaataatat tctgccggtg cgttttgtaa ttgtattcgt
     5701 tggtgatcac aagtatcatt atcattcccg ggaagtagag gaaccaactg ctaacccatg
     5761 cgatggtttg atagactgcc ggaaaatcgt acggaaaaat agtaagtggc acgttgttct
     5821 ttttcacttc accctgtagt tggaaagcga tataattgat gctgaacaac ccaacaatgt
     5881 acaacgcaag aaacacccaa aacgcccggt agttctttac tttcagccat tcaagtttta
     5941 agagatgcaa cataaaaaaa ttttttccac ctgccgtgtg agccgatcat cgccgcttca
     6001 cacgaatact tatttatttg tgagctccaa aaattttgtt tccaaacttt tctttttcag
     6061 gcgcaaataa tttaatgcaa tatttttttg aaagcaatat tgattgatcg ctgccggatt
     6121 cgcgctccca ttcggataga gtatctgcag tacgttgttc acttttttga tcgatgtaaa
     6181 cccgcccatt tgttgtaatg cagattcaag tgcggtgata tcagaggccg acaattcaac
     6241 gatttcgtct gtaactaaaa cctcgtcaac cgccccggct gtgagaacat tgccagtttt
     6301 aagaatggct acgtgggtgc aaactttttc aacttcatca agtaaatgac tcgccatgat
     6361 gatcgtcttc ccttcaccgg caagccgcgt gatcagctct cttatctcag ctataccgac
     6421 agggtcaagc ccgttcgttg gttcatcaaa aatcaaaacc tccggatcac cgagcaggca
     6481 cgaggcgatg gcgagccgtt gtttcatccc cagcgaatac gtgttgaatt tgctttgttt
     6541 gcgctggtac agcccgaccg tttgcaaaac attatcgacc tggttaaatc cttttccttt
     6601 tatgtgggcg gcgatgcgta aatttttttc agccgataag tagtgataga agtttggcgt
     6661 ttccaaaagt gttccgacgt gcttccgcaa ttgagcattg gctggcttgc ccattaataa
     6721 aaaacttccg gcggacggtt tcaaaatatc gaggatgatg ccaagcaatg ttgttttgcc
     6781 gcttccattc ggtccgagga tcccaaacac gcttccttcc ggcacagtaa atgaaacatt
     6841 atttaaagca gttaccgttt tgtaatgttt cgtgatccca ttaagttcaa gaacgttcac
     6901 gaagaaaatt ttttccaaaa taaaatcaat cggttcagaa atcgccttat attttttacg
     6961 aaaggctgaa cgattttaaa ttgccgattg gcagattccg gaattgttcg aagtttgagg
     7021 tttgaaggtg accgtttaag gctcacataa aatctgcaat ctgcaatcgc aaatctgcaa
     7081 ttgtaaatcg taaattgtaa atcgtaaatc cgcaatcgcc atgtctcctt tgtcagaaag
     7141 aatgcgacca acgaagctcg acgagcttga ggggcaggag catcttgttg gcaaaggaag
     7201 tattttacgt accgcaatcg aaaacagcaa tattccctcg atgatcttct ggggaccacc
     7261 cggcagcggt aaaacaacaa ttgccaacat tattgctcat acgttgaatg ttcccttcta
     7321 tcaactgagc gcgatcagca gtggcgtaaa agaagtgcgg gaggtgatcg agaaggcaaa
     7381 gcaacagtcg ggggtaatcc tattcatcga cgaaatccat cgcttcaata aagcacagca
     7441 ggatgcattg cttggcgccg ttgaaaaagg gatcattacg ctcataggtg cgaccacaga
     7501 aaatccttcg ttcgaagtta tttcagcctt gctgagcagg tgccaggtgt atgtattaaa
     7561 acctttggat gaagcagacc tcatgcacgt cctgcagaag gcgatggaac aggatgaggt
     7621 gatgaagaag tatgagatcg atcttaaaga aactaccgcg ttgataaata tttcgggtgg
     7681 tgatgcgagg aaattattga acctttttga attagtggtc acttcgcgaa agcccggccg
     7741 gatcgttatc tctgatgaat tcgtgatgga tgttgcgcaa aaaagaatag cgctttatga
     7801 taagcagggt gaacaacatt acgatattat ttctgcattc ataaaaagcc ttcgcggcag
     7861 cgatccgaat gcggctgtgt attggcttgc aagaatgatc gaaggaggtg aagatgtaaa
     7921 gttcattgcg cgacgcatgc ttattttggc gagcgaggat attggcaatg caaatccaaa
     7981 tgcacttctt cttgcgaatg caacatttga cgcggtaaat aaaataggct ggccggaatc
     8041 acagctgata ctgtcgcaat gtgcgatcta tcttgcctct tcgccaaaga gcaattccgc
     8101 aactacggcg attggcgccg cgtcatccgc ggtaaaacaa tttggcgacc tctcggttcc
     8161 cttgcatgtt cgaaatgcgc ccacaaaact gatgaaagat ctagactatg gaaagggtta
     8221 caagtacagt cattccttcg aagggaattt cgaggagcag gaatatttgc cgaaagaaat
     8281 ttcgggcacc aaattttttg atccgggtaa caacgcgcgg gaagacgaga tgcggaaatt
     8341 tttgaaaagc ttgtggagag ataagtatgg ctactgagat caaactttaa gagttccttc
     8401 tatactatcg tccatcgttt tccctgaaat aactgatgcg aacatcttga aaaatgccac
     8461 taatttaccg tgcttcgtgt cccagtaata accttcctgc ggctccactt ttatgacgct
     8521 gatgttaggg tcatcttcgc cttcctggaa ccatgtttta ataagaggtt tccacagatc
     8581 ttttattttt tgcctgtcgt aaagaatagt ggccttgcca aatacattta aaaaacctgc
     8641 atgatttgaa gcgctataca ataactgaac atgatcgtct tctttcaatt ccatgttttt
     8701 gttactctct ttatcactca aaaaccaaag attgccttca tcatctactt cctgcgtgct
     8761 catcggcctt gctgaaaaag gttggccggt tcttatgttc gtgcagaata aacatgtgtc
     8821 cgctttttca gcgagctctt ttactttttt aattgcttcg tcgttctcaa gatgttcgat
     8881 atgatcctcc ataattatgt ttttctcttc ccgacgaaaa acatgccact gatccgcttt
     8941 atgaataacg gcgccgctga gttatttgat ttagaaaagg tggaagcttt tcaacagtat
     9001 ttggattatg gtgtatagct gaatttatga ataatgatct cgaccggctt gcgatctgaa
     9061 ggagcccggc cctggaacaa ccagaggtta ataaaagccg gcattgaaag ggtactgatc
     9121 gaatttggcg gattggagca tgttgctgtt acaagctggt ttgaattgtc gtctgtgaaa
     9181 ccggagaggg tttgaaaaaa tacactgttg cttgtgcggg tgaaacgctg tgttgtattc
     9241 gttcccgaaa gcgcgatttc tttcgtgaac gagaaattac tgaagccctg ttgcgccggc
     9301 cacacagtgt agttgcagtt tggataccgc ttgtttcccc atcgcgccca ttcaatatcc
     9361 atctcatcga aaccgtcatt gccggaataa ttgaacaacc ccaagacgac atttttatcc
     9421 atcttgtcga tacttccttc tacccaaaac tgccatgtgc caaatccgaa tgtttgctgt
     9481 gtcgacactt ccgcgcaatt ccatttacca gttgccggat ctttggaaat cttaagatgc
     9541 aaaaatccgt ttgcgtcgac ccacacatta tttccactcc aattgttcgg gccagggcca
     9601 agatttgaac catcctttac attccaggtg tagccgctga actggatcgt ggttgcagtt
     9661 gcattgctcg ctgcggccga gtttgcaacg gtttttgaat tctccttcgt gcaatttaaa
     9721 gaaagtgctc cgagagcgag acacagaagc tttgtcatgg tatgagttta aagattcgat
     9781 gtttgaaaat gttttaggta gccctatgct taacaaaaca acttcaattt tgaaaaagca
     9841 atgggaagaa ttgtccttcc atcttttccc cttttttgat cacaggtacg ccgcttaaca
     9901 actcttcatc ggaatcgctt ttcactccgt cagcaaacac attgatcaca aacgcacgcc
     9961 ggggttgatc gcttttattt tcgccgctgc catgcaaagt gagcggatga tggaaaatag
    10021 cttcgcctgc ttttgtctcg acagggaccg gatgaaattc gtgttgctgt tccggtgtta
    10081 aataattcat gatgcccata agatcgccgg ctaattccgg tttgtcaacc aggccccagc
    10141 gatggctgcc gggtacatat tgcaaacagc cattttgttc tgtcgaatca tcgaggccgc
    10201 accagcaggt aagatgagct aatggttttg tgcgcgtcca gtaactgtaa tcctggtgcc
    10261 atgccacaac gcctcctttt tttgccggct tgtaaaacaa ctggtcgtgc cagaatcgta
    10321 cgggcacatt tccgagtagc tggctggctg ccatcaagaa ccgtgggttc cagagcacat
    10381 catgatacgc gggcgcaatg cgccatgcac ctaatgcatg aaacaggatc gtgcttgcat
    10441 ccgaagattc attgctgtga aattcataga agagttcatg tcccggtgaa gcggggtccg
    10501 ttaagccatc taattcattt ctgagtcttt cgatttgttt ttcatcgagc atttttatgc
    10561 caccgagaaa tccgttctca ttaaaaaaat caatttgatc ctgcgataat ttgtactgtt
    10621 cccaatccga tcgttttgaa ggccattcaa acaaatcagt aattaactga tgtattttgc
    10681 ttagatcttt tatttgcatg agaatttggt ttattgggcc attagtttat ttcattatcg
    10741 ggagggctag tcagcgacaa ttcatcattc attgttacgg ttatcttaac cggtccatgc
    10801 tttttatcag ctttcgatct ttataaatcc cgcgcgcggc taaaaataaa aatatcggaa
    10861 cgagaaaagc aaacactgat gtaagcgcca ggcctccgcc tgtgtaattt tttttatagc
    10921 tgaaataaag aaaaatattc aatacgctta tcactaacgc gagcactgtt agccacagtt
    10981 gcaagttgcg ttgtttaaaa acaaacacgg taaaaaggca cagtgttccc aatatcgccg
    11041 taagtaaaag aagtatcatg ttggttgtcg cattaaactg gtctgaaggg agattgggat
    11101 gagggccgat ataataaaac ggaaatttca gcgtaagaaa agcacaggct gatgcgaaca
    11161 gcagccagat ggtttgtatg cgttgtatca tgaagattat tttaaagttc aagtctaaat
    11221 tacaggaaat taagaagcgg atttttcaca aaaacaattc agccgtggat ttatctttgc
    11281 atcccaattt ttaaatatgt tcaacaatct tacggagcgg ctggagggcg ccttcaaaaa
    11341 tttgaagggt gaagcgagga tcaatgaact gaatatcgcg aatacggtaa aggatattcg
    11401 ccgcgcctta atagatgccg acgtcaatta taaaatcgct aaagaattta cagaccgggt
    11461 taaagacaaa gctgttggtg agaaagttat caatgcgatc agccccgggc agttaatggt
    11521 gaaaattgta caggatgagt tgaccgaatt aatgggcggg caagaggcag aattccaggt
    11581 tagtgggaac ccggcgatcg ttttgatagc gggtttgcag ggtagcggta aaacaacttt
    11641 cagcggaaaa cttgccaatt acctcaagac tcaaaaaaag tcgcctttgt tggtggcggc
    11701 tgacatttat cgtccggctg ctatcgacca gctcaagatc ctgggcgaac agataggcgt
    11761 tgacgtttac agtgagccgg aaacgaagga tgccgttgtt attgctgaaa acgcgatcag
    11821 agaagccaaa agcaaaaata aaaatgtggt catcatcgat acagcgggcc gcctggccat
    11881 tgatgaaacg atgatgactg aggttgccaa cataaaatct gcggttaatc catcggagat
    11941 actttttgtt gtggactcga tgacggggca ggacgcggtg aacacggcaa aagcttttaa
    12001 tgaccgtctt gatttttcag gtgtggttct cacgaagctc gacggtgata cccgcggcgg
    12061 tgcagccttg tctattcaat ataccgttca caaacccatc aaatttgtaa gcaacggcga
    12121 aaagcttgat gcgctcgatg ttttttaccc ggaacgcatg gcgcagcgca tcctgggtat
    12181 gggtgatatt acaacgttgg ttgaaaaggc gcaggcgcaa tttgatgaag tgcaggccaa
    12241 gaaactggaa aagaaaatac gaaaaaacca gtttgatttc caggactttc acgaccagct
    12301 tcagcaaata aaaaagatgg ggaatttaaa agacctcatg gctatgatac cgggtgttgg
    12361 caaggcaatt aaggacattg atataagcga tgatgcgttc aaaggaatag aagcgatcat
    12421 tggttccatg accccctttg agcgcgcgaa tccggatgtc atcaaccagg gacggcgaca
    12481 gcggatctcg aacggatccg ggagaaacat ggaggaagtg aacggcttca tgaagcaatt
    12541 tgagcagatg aaacagatga tgaaaatgat gaacaaaatg ccgatgagcg ggatgcggat
    12601 gccgggtatg cgccgataaa aaaatttaat gcaatttttg ccggccgggt gccaaacatt
    12661 ataaaattat cacttacatt cgcaatccat tattcattaa accttttata aggcctttaa
    12721 atttctattt aaaatggcag tcaagatcag acttcaaagg cacggaagta agaagaggcc
    12781 gttctacttt atcgtagtag ccgacgcccg tgctccacgc gatggaaaat ttatccagaa
    12841 aatcggaacc tacaatccgc taactgttcc agcaacgatc cagctagacc gtcagaaagc
    12901 gttagaatgg ttgcacaaag gtgctgagcc aaccgacacg gttcgccgca tcttatcctt
    12961 taaaggtgtg ctctacctga aacacttact gcgcggagta aaactgggtc tgtttgatga
    13021 agctgcagcc atgcaaaagt tccagaaatg gcacgaagaa catgaagcac acatgaagcg
    13081 ccgcagtgaa gaacacagaa aagcaagaac gggcaatcgt ccgcaatttg ctgcgaaaaa
    13141 agttgaaacg caaaattcaa cagaagtgta agtaccctga atggaagaaa tttcctttta
    13201 aaatcccgat acacgtgtgt tgggattttt tattttttga tttgcagggc acatcattca
    13261 ttaatcagat cctctgaccg aatatataca cataggaaaa ctggtcgcga cgcatggatt
    13321 caaaggcgaa atggtattga aacatgtgct cggcaaacag tcggatttta aaaatgtgga
    13381 agcgatattt attgaagatc cgagagatgc ttacctgcct tttttccatg aaaaaagtat
    13441 cccaaaaaat atctccgaaa cgatcatcaa actggaggga atagacacaa aagaggcggc
    13501 tgtgaaattt ctgcagaaaa aagtctggct tcagaaaaat gattttgaaa aattggtgag
    13561 caaaaccgcg ccggttaatt tgataggatt cactgttgtt gaaaacggaa aaagccttgg
    13621 tgctgttgag gcagttattg aacaaccgtt gcaggtgtta ctgcagatta gaatagatag
    13681 cgctgaagta ttgattccat tgcacgatca aacgctgaag aaaatagatc gcaaaaaaaa
    13741 ggaagtgcat gtgatcttgc cggaaggact attggatatt tatcttcaac gctgacgaga
    13801 tcattgctcc tgccattcgc ccatgcgccc aaacttatca atgcgcattt gtattctcct
    13861 gtcagccggg atatctttta tttcattaat ggccttcacg atataagatt ttagtatctg
    13921 agcagcttcg ttgtaattcc agtgggcgcc tccttcaggt tccggcacaa tttcgtcaac
    13981 gaggccaaat cctttcatat cgatggcggt cagttttagt tgctcagcgg ccacctcttt
    14041 tttatcccac gtgcgccata gaatggaact gcagctttcc ggagagatga cagtgtacca
    14101 tgtgttttcc atcatcaaaa ttttatcacc gactccaata cccagtgcac cgccgctggc
    14161 tccttcgcca atgatacagc agaccaccgg aacgcgcagc ctgatcattt cgtaaatgtt
    14221 gcgggcaatc gcttcaccct gtccacgttc ttcagcctcc atgccgggaa aggcgccggg
    14281 agtgtcgatc aatgtaacta ccggtttgtt gaacttttca gcaagtttca tgagtcttaa
    14341 agcctttcgg tatccttccg gattcgccat tccaaaattt ctttgttggc gcatttttgt
    14401 gttgatgcct ttttgctggc caatgatcat aactgtttgt ccatccaatt cgcctaatcc
    14461 gccaaccatt gctttgtcgt ctttcacatt tctgtcgcca aacaattcga taaaattcgt
    14521 caccatcttc tcaatatact tcagcgtgta aggacgatca ggatgacggc ttaactgaac
    14581 acgttgccat ggcgtaaggt gctcagttat ttcttttcgt ctttcttcga tcgaggcttc
    14641 gagttgttgt atagtttgag aataatctat tttggaattc ttctcagcca gttttttggt
    14701 ttgatcgatc tgctcgtata gctcctttat tggttgttca aaatcgagaa actgcctgtt
    14761 tggatatgtg ggcatgctaa cgaattagtt ggcggtaaaa ttaagagaga aattttaaaa
    14821 cttgatttta taagttcagg gctcttgcgg cattgtaata tttgatttat cttttacaag
    14881 caatcgattt tcacacttca aaaaaccgaa ctatgatcct tcttaagccg tgtcctccct
    14941 gttgtacgtc aacaccttca acgtatccaa gcatctatgt tccagatgat ttttggacat
    15001 atggaaagag taaaaagctt atggtacttc aaacaatagc agcaaaccgc accgaccttg
    15061 cggatacgct gtccgagcct attgcaacgc tcgagggcgg tacagacctg gtgcggggag
    15121 tgtaaatatt ttgatccgat attgcaattg cttcacgcaa aggaaaccgt gttccacccg
    15181 tgacgattta ttttcgtcgc gaactagttg tacgcagaac cagatcgcga tacggtgatt
    15241 aaaaacaaaa aacccggcgg cgattctgcc ccgggttttc ttgcttaact gctttattgt
    15301 ttcatcagcc gtaatgttcc gctgtgaagc tcgtctttta ccaccaccat atagatccct
    15361 ctcgccaaac ttgctaaagg tattctcact gagctgtcgt tgaccttctc agctttccac
    15421 aagactactc cctgcaggtt tgtaacaact acactgtatg gacctttcgc gttcttcaca
    15481 tccacatttg caattgcaaa tgcggggttc ggataaataa gtgccgagaa accatcacct
    15541 gcgttggccc gcgagtggtc atcggtgccg gttacagcaa atgctccaag cgataccggc
    15601 gttgtgaaat tggttcccac cgtataactg cttatgataa taacaggata ctggcaaatc
    15661 gtcgccacct gccattcata agttgtgttt gcagtcaacg ttttcagcgt atccaggttc
    15721 gtattaaccg tatcggtaag ccattttgtg ttgccaagct ttctgtatct cacaacatac
    15781 tttttcgcgc atggctgcac atcccaatgc aaagcggcgt tcgtaatggt aagcggagtt
    15841 gctgcgagat tcacaggggc tccgcatgtt acggtcacaa ctgtgggatc actatatccg
    15901 atcaaaccat tcttatcagt caccttaact gtatacgaac cgcttgtctt aactacgatg
    15961 ctctgtgtct ttgcacccgt tgaccacagg tatgacttaa cactcactcc gttgaccttg
    16021 ttcgccgtgc tcaatgttac tgaatcgcct gaacaaaacg tcgttagccc gctggcttgt
    16081 atgatcggct tcactgtgtt gtgattgagg atagtatcag tgatgctgaa gttgcttccg
    16141 atgctatagt taccacccgg actcaaagtg agcctgagta ttttgttcgg agctaaaatg
    16201 gaatcattaa ttggtttgat atacatgttc actgataaac tgtccttcgg caatatgatt
    16261 gtcccttctg ctccgtttat acctgtcgct gcggtttgtc cagcattgta gagaacatta
    16321 taatcagtgc cgtaattagc tgtgcccgaa atgttgtagt aaatagcggt tggtaacgta
    16381 tcctttgtat tcctggtgaa acgtacattg atcgaacctt tatcatcttc ataaatcgaa
    16441 gttttgttcg ctgttatgtt taaagtgttc ggacctgtgc cgaagttcga cggacttacc
    16501 gtgaagtaca tcgtatcagg ctttgtcctc acattgccaa acaagtcgta aatactgtcg
    16561 gcaatcactc tgtacaaatg gccgatgtta ttggtaatac ttgtgcgcgg cacaatgatg
    16621 atagtattga gaaagccact caaatcaacc ggcacattgc tattagctgt catgtcccac
    16681 atgttgaccg cactgttgac aaaaggcgta aagatcttgt ccgtatagct gtaagatatt
    16741 gttgtaccag ccacgtatgc accgcttgca ggttgtggtg taccaaacaa ctgcactggc
    16801 tgacggtcaa ttcttccctt tgcgatctta cagtaaacaa tgttgttgtt tttgtcggtc
    16861 actttcaaac gtacgttgta aggcccatcg acaatttttg atatgttcca gcttttcgtt
    16921 gtgcttgtgc tgcccaggtt atttttctgc actgtaaatg ctgttttcca aatacctgat
    16981 ccgggaaccg tgtattcaaa tcctattgag acaagcttgc tcgtgtcgta gccattgaaa
    17041 gtaacaggca ccgcattgtt agaaaacata ttggcaaccc aattgtttgc aggcgtaacc
    17101 aatgttacac cgctaacgcc ggactgaaaa tctgccgaca gttcaattgt gctatattca
    17161 tgtgcgttgg aatagaactg ctctactaca ggggaaaaac atgggtcact catgatcaac
    17221 tggatgttat catagttgta aacaccattt gccgtgttcc ggatcacgtc gacagttatc
    17281 ggcagttgac cgccattgtt gggtatcgga aaagtgacac cgttgaaacc atcagcacca
    17341 tttaatctga ccgttgcgcc gctgctagtc gcagcattga cgaatagaac atatggcctt
    17401 gccccgccaa cggttacgtc ctggctcaga ttattcatat aaacagtaaa gcttgcggtg
    17461 tctttttgaa cattcgtttt cgtggtaaca ccagctgtaa gtaatggacg atccaatgca
    17521 atcgttcctt cttcatgcgg acattgggtt ccgcccgcaa ccgtctcaaa cataggggtg
    17581 ccgtacaccg gatccttttt cacatttaca gaaagataat cgccctcgta agttgggcct
    17641 ccggcgttat tatcagccaa cgtatagctt gtagtggttg aagtactggt ttcagtagtt
    17701 acactgcctc cggttgtcat tttaaaccca acattaaagc caccatccaa acctattccc
    17761 gcaatgtcaa aacctgttga aatagcgaag tctttgtcaa gcgaaagatc aaagtcatat
    17821 gtgttcctcg tactgttctc aagggtattt gaaaacgttt gagtagtacc attgctaaag
    17881 ctaatgtttt gaagaaccga accttcccta atgtttcgct cgttgttatc gaccaattgc
    17941 tgccaaacgc cgatctggtt attgaagtac gctgccgaat caggattttt ggttgcagcg
    18001 gcggcaaatt gtagccgtgg tatttcctgg ccttttatat aaccctgggt gtacaaaaat
    18061 gaggtcgtat cattttttat atccattacc atcaccggtc gaggatccag gatggcgcag
    18121 tgtgtgctgt cccactctat ctctgtccca accttataat tgatgtttaa ggctgcgcca
    18181 taaacgagat ccgcatcgct tgctgtatag gctacatccg ccgccgtttg aagtgactgc
    18241 tcagacgtat tcgttataac cgtttcggtt gtgttgctgg tactgttggt ggtgctgaac
    18301 ttattatcga tggcaaccca aaaactcaac gggatctcca cgaacattcc aagtatctca
    18361 ctgagaccaa cctttacgtt tacatagcct cccgtcgttt cttctttctg tgctctaaag
    18421 ctcatcgcct gcgagctctt gactgacttc gtccattgag cataactcaa actccccgga
    18481 ggatcatgta agactaagaa tggaatttgc ggtgaaacag tgacaaaatt agtcccgctg
    18541 ggatctattg ctgcacctgt tacaacaatg atcggaagtt tcgggtttgc attgtccgtt
    18601 gaaactgacc tgttgagaat gtccgtgtac gttgcagtaa atcttttcga gtacgtacct
    18661 gtggtgtctt taacgatatt tggctgtgct gcaactaatg aatcaacacc aataccgccg
    18721 acgagattaa ctgtatcatg ttggtaattg gctacagtat tgttgatgtc tgtggtaata
    18781 aagacccggc ctgtatcaag taaacagccg cggcttacag ggccctggta caccttgaaa
    18841 gtaatgggcc gtcttacacc ctgtggccag aaatcgtaat tcttgaatgc tgcacacgtt
    18901 tgaattctgg atgaatcatc atacaacccc aacacagcta tttgaggtgc gcgatgataa
    18961 ataagatcca atgtggtgtc gccatttgta atatcccttg ttaagctggc cggtggcagc
    19021 gccttaaaat aatttttgat aacggcctgg gtggttgaag gatctaatga gtctttcacc
    19081 gtgaggctga taatttttac tatgtacttt cttgcaggaa gccttattga atactgtcca
    19141 ttctgttttg tggttacctg tttcttaaat aaagacgccc gaggctgacc agcagaatcg
    19201 agcagtacat cgtcaaactc aagcacagcc gtaccaatta aatctccgca gccagcacca
    19261 taaaatcctg aaatagtatg cgtggttgtg tcgttaaagt ttacgttcgt aacattactg
    19321 ttaacgatta tgatactgtc ggcaggtacg aatttatggt ttcggaatga aggcgtaata
    19381 gtgtattggt ctgcctgctt aaaagtcagc gagtatctcc catattggcc gggaggattt
    19441 aagtaacggg tggtgcttga atctttttcg ttattggtaa tgtcgttgtt cacgccaatg
    19501 cctacaatgc gtacgctgtc gagcgggccg gtgatgtttt tcacgacgcc gttcttatca
    19561 agacattgtt tgcacacctg cgtcacctgg ccggtaacag cgaagacggt aatatcctgg
    19621 aaagggaagt tgatcccgaa atcgtatgtg tggctactaa gagtcaatga gatctccctc
    19681 gaaggtggat tgtacttgtg cccgtttgcc gtatcgggat acactttaaa ccttactgtt
    19741 gcagaatctc cgttgaattt atccccgtaa aaaacactat caacaaaaaa ctttccttgc
    19801 tggtcggtat aagcgctgtc gagaaaacca acaggccgcc cccttaaagg tgtcaggctt
    19861 tgcacaaaaa ctttgcggtc cttgatcggt gagccgaggt tagtttgcac gtaaccgctt
    19921 atttggccat ttctcccgtt ggccgaagta aagactacta ttttcacggt gtcgctccag
    19981 ttgctgagag agccatctga tgtacatgca ttgttgccgc gacggtaata tgtcgttgtt
    20041 agtagactat cggaatcgat ccgataacct gttgtgttgt ttggtgtttt tgaggcaaca
    20101 aagttgatgt tattagtact ttgctgccaa ccaatggtta ctccggccgg gaataccggg
    20161 ctgacaatat ttgttatgct atcgggtatc agttccgggg gatatgtgat cgtatgcgta
    20221 gtccctatcg tgcccggcga tcctggactg cacgtataag tcaaaacaat ttttccattt
    20281 ccgccggaca gatcgctgat tccgaaaacg gcggcgccgc cgccgcccgg agcaaccccc
    20341 tggacggttc cggcgggatt gcccccggag cctcctccgc attggccaac tccatatccg
    20401 ttaccggcac taccgtctgc accattttga caagtgccag cgccagcacc gccgcccgca
    20461 gaagaaaaaa agtctgctgt aaatgcgcca ctgcctccat gatatgaaac ggctacgtag
    20521 ggtccggagc tggccgcgcc gcctgcaata aaggtgccgc tggggctgcc tccctgcgcc
    20581 gtaacaatcg cgctaccacc gtgcggccca aaactagttg accctcccgg gttagatccg
    20641 cctgaaccaa caacaatgtc atatgtggtt ccgaatgtaa ctggaattgc agtcgtctgc
    20701 acaaatgcgc cgcctccgcc tgaattactt cccacaagac cgaaggcgcc ggcgccccac
    20761 atttgcattg ttacactggt aacacccgca ggcggagtcc acgtaaatgt tcccggggta
    20821 gtgtaagtga tattagtttg cgaaaaagaa ctgatcatga aacatgtcag aagttgggtt
    20881 aacgcgaggc gtaaaatttt cttcatacaa ggacgtttgt gattggtcaa aaaaaattct
    20941 gatctgcgag atcatttgat aaacttattt attgagaacg tgtgtttgaa gcgggtgggg
    21001 acgaagtatg gcggagactg tccgaaacga ggaaatattt atcggggttt aaaaggtttg
    21061 aagtttgatg tttgaagttc gaggttcggt ttttagcgcg ggctcaaaat aatttctcgg
    21121 ggtgttctgt tagttcaggg caaagaatta tttaaacttt tcgcacagag gacgcacaga
    21181 tagcagagga ttttctctgt gtgctttgtt agctcctatg caaaaaatag gtttgcgcaa
    21241 gcttgcagtg cgtctcctta agcagcttta ctgatttaat tcaaagcaga catttatagc
    21301 gttattgttg tgtgagcgga aaatgacagt cgcgatttgt tcgcacagag aaggcagagg
    21361 tttt
//
LOCUS       DASQJI010000251         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2482845,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000251 DASQJI010000000
VERSION     DASQJI010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2482845"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VEV83_07190"
     CDS             <1..198
                     /locus_tag="VEV83_07190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44934.1"
                     /translation="EGKWLIEGRGVEPDIVVDDLPYETYNGKDAQLEAAVEYLKKEIK
                     NDPRDMPAAPKHPDKSFDYNR"
     gene            complement(557..1333)
                     /gene="xth"
                     /locus_tag="VEV83_07195"
     CDS             complement(557..1333)
                     /gene="xth"
                     /locus_tag="VEV83_07195"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HYK44935.1"
                     /translation="MKIATYNVNGISSRLPVFLRWLSETSPDVVCMQELKAPQENFPL
                     QAIQDAGYQAIWHGQKSWNGVAILSKNSLPEERCRVLPGDPEDSHSRYIEATVNGIVI
                     GCLYLPNGNPAPGPKFDYKLKWLERLTAHAAELFASDMPVVLTGDYNVIPTEIDVYKP
                     ERWVKDALFRPDTRAAFHNLMSQGWTDAIRKLYPNDVIYTFWDFFRNNFERNAGLRID
                     HFLLSPHVDKRLVAGGVDRMVRGWEKSSDHAPVWIELSAD"
     gene            1482..>2489
                     /locus_tag="VEV83_07200"
     CDS             1482..>2489
                     /locus_tag="VEV83_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK44936.1"
                     /translation="MELKTQSKNNSRRNFIKNTTAAAAGFYIVPRHVLGRGYVPPSDK
                     LVIAGIGAGGKGESDIQNFFESGKADIAVLCDVDDRQAVASRQRFPKAKYYKDFREML
                     DKEHKNIDACSVSIPDHNHAVAAMAAMQLGKHVYVQKPLTHDIYEARMLTQAAHRYKV
                     VTQMGNQGASGDGVRQLIDWYKAGIIGDVHTVYCYTDRPVWPQGIGWPTDKPPVPKEL
                     DWDLWLGTANFREYEDNVVPFNWRGWWDYGTGALGDMACHIMEPGFSVLGLGYPVAAE
                     CSVSTRYVENWNAAYFPDSGPVSSHIILSFKGKNGKPDVKLHWMDGGIQPERPEELLP
                     NE"
BASE COUNT          669 a          576 c          634 g          610 t
ORIGIN      
        1 gagggcaaat ggctgatcga gggccgtggt gttgagccgg atattgtagt tgatgatctt
       61 ccttatgaga cttataatgg caaagatgcg cagttagaag ctgcagttga atatttgaaa
      121 aaagagatca agaatgatcc aagggatatg cctgccgcgc caaagcatcc ggataagtcg
      181 tttgattata atcggtgaat cggcagatag tccggaagac gggaagtccg gaagaccgaa
      241 aagttttgag aacgaaaagt ttgggtttga aagatgtcga tgcaaaagcg aaccgtcacc
      301 tagacgacag gacaggtctc agcgaatcgg atctcaacga atcttttttc ctctcctgcg
      361 cccatcccct aacggaagaa aaaccgctac cctcacctcg acgttaggag aggtctcagc
      421 gaatgttttt gttgtgtcac gaatcaaatc ttaatcgccc gatagctcaa tccacaccag
      481 cgagtaggaa ttgctaccgt cacctcgacg ttaggagagg tctcaacgaa tgttttgttt
      541 tgtcacgaat cggatcttaa tccgcagaca actcaatcca caccggtgca tgatcgctgg
      601 atttttccca gcctcgtacc atgcggtcaa caccgccagc gacgaggcgt ttatcaacat
      661 gcgggctgag caggaagtga tcgatacgta aacccgcatt gcgctcgaaa ttgttgcgga
      721 aaaaatccca gaaagtatag atcacatcgt tcggataaag ttttcggatc gcatcggtcc
      781 aaccctgcga catgaggtta tgaaaagccg cacgtgtgtc aggccggaac agcgcatctt
      841 taacccaacg ctccggttta tacacgtcaa tctcggtggg aattacatta tagtcgccgg
      901 tcaacaccac cggcatatcg gacgcaaaaa gttctgcagc atgtgctgtc aatctttcaa
      961 gccattttaa tttgtaatcg aacttaggtc cgggggcagg attgccgttc ggaagataga
     1021 gacagccaat tacaatgccg ttcacggtcg cttcgatata tcggctatgg ctgtcttcgg
     1081 gatcacctgg tagaacgcgg catctttctt ccggcaagga attttttgaa agtatggcaa
     1141 cgccattcca gcttttttgt ccatgccaga tggcctgata acccgcatcc tggatcgcct
     1201 gtaacggaaa gttttcttgc ggcgccttca gctcctgcat gcaaacaaca tcaggacttg
     1261 tctcactgag ccaccgaaga aatacaggta gtcggctact aatgccgttt acattgtacg
     1321 ttgctatttt cattggcgaa aattataatt aaattccgtc tttccgcctc cgcctcatcc
     1381 ggaaaaatat caccccttga atattttact gctgcttcag tgcgcaaacc gacatgaatt
     1441 gataatttcg tcgggatatt ttgtctttta agcaatgcta tatggaactg aaaactcaat
     1501 caaagaacaa ttcacgcaga aattttatta agaacaccac agccgcagcc gccggatttt
     1561 atatcgtacc gaggcacgtg ctcggcagag gctacgtgcc gcctagcgac aaattggtca
     1621 ttgcaggcat cggagctggc ggtaagggag aaagcgatat tcaaaatttt tttgaaagcg
     1681 gaaaagcaga tatcgccgta ctctgcgatg tggacgacag gcaggcggta gccagcaggc
     1741 aacgtttccc aaaagctaaa tactacaagg attttcggga gatgcttgac aaagaacata
     1801 agaacatcga tgcctgctct gtttcgatcc cggatcataa tcatgctgtg gcagctatgg
     1861 cggcaatgca gctgggcaag catgtgtatg tacaaaaacc tttgacacac gacatttatg
     1921 aagcgcgcat gttaacgcag gccgctcatc gttacaaagt cgtgacacaa atgggcaacc
     1981 agggcgcaag cggcgatggt gtgcgacagt tgatcgattg gtataaggca ggcataatcg
     2041 gcgacgtaca tacggtgtat tgttataccg accggcccgt gtggccgcag ggtatcgggt
     2101 ggccgactga taagccgcct gttccaaagg aactcgactg ggatctttgg ttaggaaccg
     2161 caaatttcag agagtatgaa gacaacgtgg ttccttttaa ctggcgcggc tggtgggatt
     2221 acggtaccgg cgcactgggc gatatggcgt gtcatatcat ggaacccgga ttttctgttt
     2281 tgggattggg atacccggtc gctgcggaat gcagtgtgtc cacacggtat gtagaaaact
     2341 ggaatgcagc gtattttcct gacagcggcc cggtttcttc tcatattatt ctttcgttca
     2401 aaggcaagaa tggaaagccg gatgtgaaac tgcattggat ggatggcggc atacagccgg
     2461 aacgtccaga agagttgttg ccaaacgaa
//
LOCUS       DASQJI010000252         4616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2943317,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000252 DASQJI010000000
VERSION     DASQJI010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4616
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943317"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /locus_tag="VEV83_07205"
     CDS             <1..1093
                     /locus_tag="VEV83_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK44937.1"
                     /translation="KLGANDFITKPWSNEHILQSIKTLLDLQDKKTEQHTRKQLDSIY
                     NFQQIIGEDPKMLELLETVGRVAATDASVLIMGESGTGKELVAEAIHQNSLRNSKPFI
                     KVNLGGISTSLFESEMFGHVRGAFTDARIDRVGRFEMANKGTIFLDEIGDLDAGSQVK
                     LLRVLQDRTYEVLGSSRTKTVDVRVISATNRNLDEMVDKGAFREDLLYRINLITVKLP
                     ALRERPKDIPLLVNFFINNLREIYNRQSLTVTRDAMKWLQQLPLPGNIRQLKNLVERS
                     VLVSRKDVLDMDAFRSQLELSPSKKGSIQLPDVGVLTLDEIEVQMIKKALEHHQNKIS
                     KAAASLGLTRSSLYRRLEKYNIPYDEASD"
     gene            1077..2378
                     /locus_tag="VEV83_07210"
     CDS             1077..2378
                     /locus_tag="VEV83_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK44938.1"
                     /translation="MKLRTKYILFVVLVHLVALVLSYFIFKNDPVLFIVCEALILISI
                     VLAWQLYNQLIQPLKLLMQGTEAIKDRDFNVKFLKTGKYEMDQLINVYNNMIDELRTE
                     RTKQEQQHFFLEKLIQTSPTGIIILDYEDNVQQANPKALELLDATEKELIGKSVSEVD
                     HPMMQQILQLKSGEAKTITLNGANTYKLQKSHFVDRGFPRHFVMIEELTAEILAAEKK
                     AYGKVIRMMAHEVNNTIGPVNSILQSTLKKETLWKHDDHDALQHALQVAVDRNQNLNI
                     FMRNFADVVRLPEPHRKKLNLHELIRSVAKLMEAKAAERQIAFSYSLAENDLYIFADE
                     QQMEQVLINIIKNAIEAIEEDGTVSFATDNATRQLTIIDTGKGIADEVAGQLFSPFFS
                     TKKDGQGIGLTLVREILLNHGYEFYLKSFPEGRTEFVIKFG"
     gene            2880..>4616
                     /locus_tag="VEV83_07215"
     CDS             2880..>4616
                     /locus_tag="VEV83_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44939.1"
                     /translation="MRNTILPKRILSFTLPCLLTTVLLGQPPKQWDKRFGGTDFEYFS
                     ALQQTKDGGYILGGFSYSGIGGDKTEESRGSNDYWVVKVDANGEKQWDKRFGGTDEDY
                     LGSVEQTTDGGYVLGGWSHSGIGGDKTEASWGSYDYWVVKIDANGVKQWDKRFGGTGT
                     DKLASLEQTTDGGYILGGLSHSGIGGDKTEEHRGDYDYWVVKIDANGVKQWDKTFGGA
                     LDDELHSLQQTTDGGYVLIGYSNSGIAGDKSEESRGSYDYWAVKIDANGVKQWDKTFG
                     GTSFENATSLQQTTDGGFILGGYSESGIGGDKTEDSRGYYDYWVVKIDANGLKQWDKR
                     FGGTDYDECESVQQTVDGGYILGGYSASGIGGDKTENSRGYTDYWVVKINAIGIKQWD
                     KRFGGTYYDNATSLQQTTDGGYVLGGWSQSGIGGDKTEESRGSDDYWIVKVGCPPNST
                     VIPSGTLDICQTDSIVLHAYSADGCKYQWIRDSKIILGATDSTYAATRPGIYRVLVYT
                     RKLCADISKPIKIISSCNRSNDISIYPNPSNGIVTLTYNSIHAGTVQLNVYDKTGRLM
                     FSQKETAIEGSNT"
BASE COUNT         1404 a          969 c         1099 g         1144 t
ORIGIN      
        1 gaaactcggt gcgaatgatt tcatcacgaa accctggagc aatgagcata tcctgcaatc
       61 gataaaaact ttattggacc tgcaggacaa aaaaacggaa cagcacacac gcaagcagct
      121 tgacagcata tacaattttc agcagatcat tggagaagac ccgaagatgc tcgagctcct
      181 ggagactgtc ggtcgcgttg cagcaactga tgcttcggtt ttgatcatgg gtgaaagcgg
      241 caccggtaaa gaattagttg cagaagctat tcatcaaaac agtttacgaa acagtaagcc
      301 atttataaaa gtaaatctcg gcggcatatc aacatctttg tttgaaagtg aaatgttcgg
      361 ccatgtgcgt ggtgcattta cagatgcacg catcgatcgt gtgggacgtt ttgaaatggc
      421 aaacaaaggc actatttttt tagatgagat cggcgacctc gatgcgggca gccaggtgaa
      481 attattgcgc gtgctgcagg acaggacgta cgaagtgctc ggcagcagtc gcacaaaaac
      541 cgtcgacgtg cgtgtgatca gcgccaccaa caggaacctc gatgagatgg tcgataaagg
      601 ggcatttcgg gaagacctgc tatacaggat caacctcata acagtgaaat tacctgcttt
      661 acgcgaacgg ccgaaagaca ttcccctgct tgtaaatttc tttatcaaca acctcagaga
      721 aatctataac cgtcagtcgc ttacggtaac aagagacgca atgaaatggc tgcagcaatt
      781 gccgctgccg ggaaatattc gccagttaaa aaatctagtt gaacgttcgg tgctggtcag
      841 ccgaaaagat gtgctcgata tggacgcatt ccgttcgcag cttgaattat cgccatcgaa
      901 aaagggcagc atccaattac ccgacgtagg cgtattaact ttagacgaga tcgaggtgca
      961 gatgattaaa aaagctttgg aacatcacca gaacaaaatc tccaaagcag cagcgtcgct
     1021 cggacttaca cggagctcgc tgtacaggcg cctcgagaaa tacaatattc cctacgatga
     1081 agcttcggac taaatatatt ttgtttgtgg tgctggtgca tctcgtcgcg ctggtgctgt
     1141 cttattttat tttcaaaaac gacccggttc ttttcattgt ctgcgaagca ttgatcctaa
     1201 tttcaattgt gcttgcatgg caattataca accaactgat acaacccttg aaattgctga
     1261 tgcaggggac cgaagccatc aaagacagag acttcaacgt aaaattcctg aagacaggaa
     1321 agtatgaaat ggaccagctc atcaacgtat acaataatat gatcgacgaa ttgcgcaccg
     1381 agagaaccaa acaggagcag caacattttt ttctcgagaa attaattcaa acatctccca
     1441 caggaatcat cattctcgat tatgaagaca atgtgcagca ggcaaatccg aaagcgttgg
     1501 aactgctcga tgcaacagaa aaagaattga tcggcaaatc ggtgagcgag gtggatcatc
     1561 cgatgatgca acaaatactg cagctcaaat ccggcgaggc gaagacaata acgctcaacg
     1621 gagcgaatac ttataaactg cagaagtcac attttgtaga ccgcggcttt ccaaggcatt
     1681 ttgtgatgat cgaagaactc acagcggaaa tccttgctgc ggaaaagaag gcgtatggaa
     1741 aagttatacg catgatggcg catgaagtga ataataccat tgggccggtg aattctattt
     1801 tgcaatcgac actgaaaaaa gaaacgcttt ggaagcatga tgatcacgac gctttgcagc
     1861 atgcattgca ggtcgcggtt gaccgcaatc agaacctgaa tattttcatg cgcaatttcg
     1921 ccgacgtagt gcgattgcca gaaccgcaca gaaagaaact aaacctgcat gaactcattc
     1981 gttctgttgc aaaactcatg gaagcgaagg ctgccgaaag gcagatcgca ttcagctact
     2041 cacttgctga aaatgatctt tacatttttg cggatgagca gcaaatggag caggtgctca
     2101 tcaacattat aaaaaatgcg atcgaagcga tcgaagaaga cggtactgtc tcatttgcga
     2161 cagacaacgc tacgcggcag ctcaccataa ttgacaccgg caaaggcatt gccgacgaag
     2221 tcgcggggca actcttcagt cccttcttca gcacaaagaa agacggccag ggaattggtt
     2281 tgactttggt gcgtgagatt ttattaaacc acggatacga attttatttg aagagttttc
     2341 ccgaggggag gaccgaattt gtgattaagt ttgggtgata tgcgttgcag gttcctcgtt
     2401 agcagctttg ttgctccgta gatgcggaat gacaaacgaa gcgctctgtc attccgagtg
     2461 aatatctatt ctacgaaaaa tgaaacttcc ccaacgagga atctgcaacg cacccacagc
     2521 tctttcctat gaaacattta tttggcagcc agccatcaaa cagctcgaaa ttcagaaatt
     2581 ttttttcggg attaaacgac atgatcagag cttctttctt ttcccttctc catttcttca
     2641 cttccttttc acgcgcaatt gaatcgttca cgaaaataaa cgatcatcct cggtctgcgc
     2701 tgcgaatttc tctttagaac gcttctggct tcgtagtccc gtgtgtcact cggaatgaca
     2761 gggaacgacc accacgcatt gtataaatgg ataaacttta gtagatttaa tacgctgatc
     2821 atttactctg ctgcgtggaa tcaagtaacc taattttttt caccataaaa acctgggtca
     2881 tgagaaatac aattttacca aaacgtattt tatcatttac actgccatgt ttgttaacca
     2941 ccgttttgct tgggcaacca cccaaacaat gggacaagcg ttttggcgga accgactttg
     3001 aatatttttc tgctcttcaa caaacaaaag atggtggcta tattttaggc ggtttttctt
     3061 attccggaat tggtggtgat aaaacagaag aaagccgtgg aagcaatgat tattgggtag
     3121 taaaagttga tgccaatggc gaaaaacaat gggacaaacg tttcggcgga acagacgaag
     3181 attacttagg ctccgttgag caaacaacag acggtggtta tgttttaggc ggctggtctc
     3241 actctggcat tggcggtgac aaaacagaag caagttgggg tagttatgat tactgggtag
     3301 taaaaattga tgccaatggt gtaaagcaat gggacaaacg ttttggcggg acaggcaccg
     3361 ataagctagc ctccctcgag caaacaactg acggtggcta tattttagga ggcttgtctc
     3421 actctggcat cggcggtgat aaaacagagg aacatcgggg agattatgat tattgggttg
     3481 tgaaaattga tgccaatggc gtaaaacaat gggacaaaac ttttggcggg gcactcgacg
     3541 atgaactaca ttcccttcag caaacaacgg atggtggcta tgttttaatc ggttactcca
     3601 attcaggtat cgctggcgat aagtcagagg aaagccgtgg aagttatgat tattgggctg
     3661 tgaaaatcga tgccaatggc gtaaaacaat gggataaaac ttttggggga acaagcttcg
     3721 agaacgcgac ttcccttcaa caaacaacgg atgggggctt tattttaggc ggttattcag
     3781 agtccggcat tgggggagac aaaacagagg atagccgcgg gtattatgat tactgggtag
     3841 taaaaattga tgcgaatggc ctaaaacaat gggacaaacg tttcggcgga acagattatg
     3901 acgaatgcga atccgttcaa caaacagttg acggtggtta tattttaggc ggttattccg
     3961 cttctggcat cggtggggat aaaactgaaa acagccgtgg atatacggat tactgggtag
     4021 taaaaattaa tgccattggc ataaaacaat gggacaaacg tttcggcgga acatactacg
     4081 ataatgcaac ttcccttcag caaacaacag acggaggtta tgtcttagga ggctggtctc
     4141 agtctggcat cgggggagat aaaacggaag aaagccgtgg gagcgacgat tactggatcg
     4201 tgaaagtggg ttgcccgcca aatagtaccg ttatcccatc gggcacttta gatatttgcc
     4261 aaacagattc tatagtgtta catgcatatt cggccgacgg ctgcaaatat caatggataa
     4321 gggatagtaa aataatcctt ggcgcaacag acagcacgta tgccgcgacc cgaccgggca
     4381 tctatcgggt gttagtttat acaagaaagc tttgtgcaga tatttcgaaa ccgataaaaa
     4441 ttatttcatc atgcaaccga tcaaatgaca tttcaatcta ccccaatcca tctaatggca
     4501 ttgttacact cacatacaac agcatacacg ccggaactgt tcagttgaac gtgtatgata
     4561 aaaccggcag gctgatgttc tctcaaaaag agactgcaat agaaggcagt aacact
//
LOCUS       DASQJI010000253         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1408701,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000253 DASQJI010000000
VERSION     DASQJI010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408701"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..428)
                     /locus_tag="VEV83_07220"
     CDS             complement(192..428)
                     /locus_tag="VEV83_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44940.1"
                     /translation="MQKTLSDLDKLQTLITSRWADYKQAIRDNRPFEEVKTIYVQIRE
                     LEKKADALMRKANDLHSGTFSFSRPPDDSGFMVQ"
     gene            677..994
                     /locus_tag="VEV83_07225"
     CDS             677..994
                     /locus_tag="VEV83_07225"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44941.1"
                     /translation="MNDLQSAIIVFELIRDFYPGNFNRYGDNSVLKDQFNIYSVLGDT
                     YLAAGQNEKAVECFKKALELNPNYSGAIQALKKLETGNQECCFKGMYANCWTRHPLKE
                     EGL"
     gene            complement(1206..>1600)
                     /locus_tag="VEV83_07230"
     CDS             complement(1206..>1600)
                     /locus_tag="VEV83_07230"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK44942.1"
                     /translation="WYAVHDPRGLAPLGWHVPSDLEWNTLSTYLGGDSVAGGKMKTTG
                     IYEEGSGRWHKPNLGATNSSGFSALPGSLRYSDGSFSIIGYYGRWWSSTKSSATNSWD
                     RSLNTWVEDLGRNSDNKQYGFSVRCIKD"
BASE COUNT          437 a          351 c          375 g          437 t
ORIGIN      
        1 gttcgcgaac gtcgttccaa ttacccggat agaaaggtag gcgatgtaaa aagaaaaacc
       61 gcttgatttg gaaatacaag cggttacatg ctaatccttt tttcgtggat tctcggatct
      121 caaagaaaca acatgttcat catcattaaa tcgtttcaaa gatagtggca taaagtttct
      181 acaagcaaat attattgaac cataaagccg ctgtcatccg gcggtctgga aaaagagaaa
      241 gttcctgaat gcaaatcgtt tgctttgcgc atcaacgcgt ctgccttttt ctccagttcc
      301 ctaatttgaa cgtagattgt ttttacttcc tcgaacggcc tattatctct tatcgcctgc
      361 ttgtagtcag cccaacggga cgttatcaac gtttgcagct tgtcaagatc tgacaatgtt
      421 ttttgcatat gcagaagctt tagtggggga ccttaaggta cgataaatgt agcagaacgg
      481 aaaaaaaacg tttcgattga gcacggcatt aaaacagggg agtccgggtt agctgtctta
      541 aaacattgga gattttcggg ttgttgagac cctcctgtgt ctcctttaaa tagctgatat
      601 gatgtttcat gcgccgtgat agcctgatat cttttttggc tcgaccgcgt aggcactgat
      661 aacgtatcgt tactggatga acgatttgca atcggccatc atagtttttg agttgattcg
      721 tgatttctat ccgggaaatt tcaatcgcta tggcgacaac agcgtactga aagatcagtt
      781 caacatttac agtgtgctcg gcgatactta tctcgccgcc ggacaaaatg aaaaagcggt
      841 tgagtgtttc aaaaaagctt tagagttgaa tccaaattac agcggcgcga tccaggcgtt
      901 gaagaaattg gagaccggta atcaagaatg ttgcttcaaa gggatgtacg ctaattgttg
      961 gacaagacac ccactaaaag aagaaggttt ataagaatcg ccgcatacaa tagatgaata
     1021 aacattcaga cgctgccacg aactaacgtg taggctttta ttttttcttg tgagagagcc
     1081 aggcctgtgc ctgcaactta acatgatcga ttcttatcgg caacgcaccg cacgcgcggc
     1141 gaaaaatgtg tagccaatcc gagccggagg ggagcgcatt ggaggcgata gcgaggtgtg
     1201 ccctgttaat ccttaatgca acgcacagag aagccgtatt gcttgttgtc agaatttctg
     1261 cccaagtctt ccacccaggt gttcaagcta cgatcccagg aattggtagc actggactta
     1321 gtggaactcc accatctacc atagtagccg ataatagaga aagatccatc gctgtaacgt
     1381 aggctgccgg gtagtgcact aaagccactg ctgttagtgg cgccgaggtt cggcttgtgc
     1441 catctgccgc tgccttcttc atagattcca gttgttttca ttttgccacc ggctactgaa
     1501 tcacctccta aataagttga aagtgtattc cattcgagat cacttggcac gtgccagccc
     1561 agaggtgcca aacctctcgg atcgtggaca gcgtaccagt
//
LOCUS       DASQJI010000254         5484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1253703,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000254 DASQJI010000000
VERSION     DASQJI010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5484
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1253703"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VEV83_07235"
     CDS             <1..316
                     /locus_tag="VEV83_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HYK44943.1"
                     /translation="SHADIEKLTGKHFDRITIYRTLQTFVEKGIVHIIPTSDNSIMYA
                     LCKEACSEGHHHDDHVHFICSSCGTTYCLDQVSVPVVQIPKGFSAHDTNVVINGVCKN
                     CR"
     gene            complement(585..1673)
                     /locus_tag="VEV83_07240"
     CDS             complement(585..1673)
                     /locus_tag="VEV83_07240"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK44944.1"
                     /translation="MSILFKRLTQLLCVTLLSATIYAQGVITTPRTPSPAASVSQTIG
                     ISTVTVSYSRPSVKGRDIWGALVPYGWNVQAFGAGNSAPWRAGANENTTITFSDNAKV
                     EGHDVPAGTYGLFFVVNKDNTGEVILSKDYKSWGSFWYDPKQDFMRSNIQLREIPMTE
                     MLTYGFINDDKTSAELVLNWEKKQFPVKIEFDVDRIVMENAANQLKNTVGFSWQGYSS
                     AANYALQNKVNLDQGLVWIDQAIAQNKNFTTLSIKSNLLKASGKADDADRLMKEAIDI
                     STENELNLYGYQLLNQQQTDKAIEMLALNAKRHPESPNVWDSLGEAYVTKGDKTKAIE
                     NFKKSLSMNPPANVKANSEKFLKQLGAM"
     gene            1867..5163
                     /locus_tag="VEV83_07245"
     CDS             1867..5163
                     /locus_tag="VEV83_07245"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44945.1"
                     /translation="MRRLYSTIIFFLLFSGFVFSQKTKSADSATAAKDPMQSSTFAGL
                     SFRSIGPALTSGRIVDLAVNPNNTSEYYVASGSGGVWKTVNAGVTYTPVFDGEGSYSI
                     GCVTLDPSNPNIVWVGSGENNNQRSAAYGDGVYKSEDGGKSWKNMGLKNSEHIGKIVV
                     DPNNSDIVFVAAYGPLWSDGGDRGIYKTTDGGKTWNAVLTVSKYTGFNEVWMDPRNSH
                     VLYACAHQRQRKVFTYIGGGPESAVYKSTDGGTSWNKIMNGLPSGVDIGRIGLAISPL
                     NPNCLFAIVEAADDKGGFFASTDMGASWEKRGTYSSAGNYYQEIFCDPKDINKIFAMN
                     TILQVSVDGGRTFKALGERSKHVDNHVIWVEPANTNHMLVGCDGGLYECYDGGQYWNF
                     KGNIPVTQFYKVSLDNTFPFYYVYGGTQDNFSLGGPSRTTSGNGIANSDWFVTAGGDG
                     FESQADYEDSTIVYAESQYGGLVRFDRNTGEKVDIRPIEAVGDAPYRWNWDAPLLISR
                     HDHKRLYFGSDKLFRTDDQGNTWKVISGDLSRGIDRNKLTVMGKVWSVDAVAKNQSTD
                     VYGQLTTIAESPLDENILYAGTDDGLIHVTTDGGKNWTKIDNIPGVPQQTYVNMIIAS
                     GHNKNVAYVAFNHHRYGDFKPYLFKTRDGGKTWTAIQNNLPERGTVYCMAEDHVNPDL
                     LFAGTEFGVYFSIDGGGKWIQLKGGLPTIAIRDMEIQRRDNDLVVATFGRGFYVLDDY
                     TPLRTLTSSDFQKTAFISPVRNSWMYVESMPLGLRNKGFQGESYWSAPNPKPGTVFTY
                     YLKDDLKTLKEKRQEAEKQKIKIGDPVYYPSLDTLRLEDIQPAPYLLFTITDDAGNVV
                     RRLKAPAKKGINRISWDFRNDTKVPVDFTPFDESNVFSNPDRGTLVVPGTYKVSMQKF
                     EDSVYTELVSPVSFRIEALNMIHMPVADKKVLYDFGMKVEELQRAVAGTNVYADELRN
                     KLKYMKQAVLQTPAMDASVMKQMIVLERRLTEVDKILNGDASLTRREFEAPTSLNSRI
                     GSIMDGLVSTTTAATNTFMNSYNDAARQFAPVSTEVKNIDAEIKKLELVLEQNKAPYT
                     PGRLPQWNQQ"
BASE COUNT         1555 a         1172 c         1291 g         1466 t
ORIGIN      
        1 ttcgcatgct gacatagaaa aactaacagg aaagcatttt gacaggatca cgatttaccg
       61 caccctccaa acatttgtcg aaaaaggcat cgttcatatt attcccacgt cagataattc
      121 gatcatgtat gcgctctgta aagaagcctg cagtgaagga catcatcacg atgatcatgt
      181 gcactttatt tgctcatcgt gcggcaccac atattgcctc gaccaggtta gtgttcccgt
      241 ggtgcagata ccaaaaggat tttctgcaca cgacacgaat gttgtcatta atggtgtgtg
      301 caaaaattgc agataatgca ggctttacag tgaaaacaaa tccctgcttt ttcgcggttg
      361 gaaatttatt catgtccgga ctcgaccctt tgcttcgcaa agagctccgt taactcactc
      421 accatttcca ggatgcaagc cccgaaaggg cgaaatacaa ataactttcg ataaaatcgg
      481 gccaaggagc cggcacataa caaccaaccc tgaaagggtt gaatggcagt aaaaaaataa
      541 cccgcacttg cgcgggctat ttgttaatct caaatccgaa agtcttacat cgcgcctaat
      601 tgtttcaaaa atttttccga gttcgccttc acattggcag gcggattcat gctcagcgat
      661 tttttgaagt tctcgatcgc ttttgtttta tcaccttttg ttacgtaagc ttctccgaga
      721 ctgtcccaaa cattcgggct ttccgggtga cgcttcgcat tcagggcaag catttctatc
      781 gctttatccg tttgctgttg gttgagcagt tgatatccat acaaattcaa ttcgttttcc
      841 gttgaaatat cgatcgcttc cttcatcaac ctgtcggcat cgtcagcttt gccgcttgct
      901 ttcagcaaat ttgatttgat gctcagcgtg gtgaaatttt tgttctgcgc tatcgcctgg
      961 tcgatccaca cgaggccctg gtcgaggttc accttattct gcaacgcgta gttcgctgcg
     1021 cttgagtatc cctgccatga aaaaccaact gtgttcttta actggttggc agcgttctcc
     1081 atcacgatcc tgtcaacatc gaattctatt tttaccggga actgtttctt ttcccagttg
     1141 agcacgagtt cagcagaagt tttgtcatca ttgataaatc catacgtcag catttcggtc
     1201 attggtatct cacgcagttg aatattggat ctcatgaaat cctgcttcgg atcataccaa
     1261 aaactgcccc atgatttata gtctttcgat aggatcactt cgcctgtgtt gtctttatta
     1321 acaacgaaaa ataggccgta cgtgccggca ggtacgtcat gcccttccac cttcgcattg
     1381 tcagaaaaag ttatcgtagt attttcattt gcacccgcgc gccacggagc cgagttgcct
     1441 gcgccaaaag cctgcacatt ccatccatag ggaacaagcg ctccccaaat gtcacgccct
     1501 tttactgacg gtcttgaata acttacggtg acggttgata taccgatcgt ttgtgaaacc
     1561 gatgcagcag gacttggtgt tcggggcgta gtgatcactc cctgcgcata tatcgttgca
     1621 gacagcagcg ttacgcaaag caactgcgtc aaccttttaa atagaatgga catctcatgt
     1681 gttttaagtg aggaaataat acaatctacg gttttagata agcgggcatc tttctttatt
     1741 ttcaaacggt catactttag tgtgaaaggt ggcgtaaact gcacgcataa ttgttcccga
     1801 tttacaaagc acatcgaaac ttaattatta cgattcttct tattttcacc gctaaacctc
     1861 agccatatga gaagattata ttccacgatc attttctttt tacttttctc cggctttgtt
     1921 tttagccaga aaacgaaatc tgcagactcc gccactgctg caaaagaccc gatgcaatct
     1981 tcaactttcg ccggtctttc ttttagaagt attggccctg cgcttacatc aggacgaatc
     2041 gttgatctcg cagtgaaccc aaacaatact tcagaatatt atgtggcgtc gggttctggt
     2101 ggcgtttgga aaactgtgaa cgctggtgtt acctacacgc cggtttttga tggtgaaggt
     2161 tcgtattcca taggctgtgt tacgctggat ccgtcgaacc cgaacattgt atgggtgggt
     2221 agcggcgaaa ataataacca acggtctgcg gcctatggag atggtgtata caaaagcgag
     2281 gacggaggaa aaagctggaa aaatatgggc ctgaaaaatt cggaacacat tggaaagatc
     2341 gtcgttgatc caaacaattc tgatatagtt ttcgttgccg cctacggtcc cctgtggagt
     2401 gatggcggtg atcgcggtat atacaagaca actgatggtg gtaagacctg gaacgcagtt
     2461 ctgacggtaa gcaaatacac agggttcaat gaagtttgga tggacccgcg taacagccat
     2521 gttttgtatg cgtgcgcaca tcaacggcag cgaaaagtat ttacgtatat cggcggcggt
     2581 cctgaaagcg cagtttataa atcaacggac ggtggcacaa gctggaataa gatcatgaac
     2641 ggtttgcctt cgggtgttga tattggaagg ataggtttgg caataagccc tttaaatccg
     2701 aattgcttat ttgcgatcgt cgaagcagca gatgacaaag gaggattctt cgcatctacg
     2761 gatatgggag cgagttggga aaaacgcggc acctattctt cggctggcaa ttattaccag
     2821 gaaatttttt gcgacccgaa agacatcaat aaaatctttg ccatgaacac gatcctgcaa
     2881 gttagtgtgg atggaggcag aacttttaag gcgcttggcg aaagaagtaa acacgtagat
     2941 aaccacgtca tctgggttga gcctgcaaat acaaaccata tgttggttgg ttgtgatgga
     3001 ggcttatatg aatgctatga tggtggccaa tattggaatt tcaaaggcaa cattccggta
     3061 acgcaatttt ataaagtatc gctcgataac acgtttccat tctattacgt gtacggcggt
     3121 acgcaagata acttcagttt gggtggccct tcacgcacga ccagcgggaa cggcattgcg
     3181 aacagtgatt ggtttgtaac ggcgggcgga gatggttttg aaagccaggc agattatgag
     3241 gattcaacca tcgtctatgc ggaatctcag tacggcggtt tggtgcgttt cgacaggaac
     3301 accggtgaga aggtggacat ccggcccatt gaagcggtgg gagacgcacc gtatcgatgg
     3361 aattgggatg cgccgctgct tatatcgaga cacgatcata agcgtttata ttttggttct
     3421 gataaattgt ttcggaccga tgaccaggga aatacgtgga aggttatcag cggcgatctg
     3481 tcgcgcggta ttgacagaaa taaacttacc gtgatgggta aagtctggag cgtagatgct
     3541 gttgccaaga atcagtcgac agatgtttat ggacagctca caacaattgc agaatctccg
     3601 ctcgacgaaa acattttgta tgcaggaacg gatgatggat tgattcacgt tacaactgac
     3661 ggaggaaaaa actggacgaa gatcgataac attcccggtg tgccgcagca aacatatgta
     3721 aacatgatca tcgcatctgg ccacaacaaa aatgttgcgt acgtcgcgtt caatcatcat
     3781 cgttacggag acttcaaacc atatttattt aagacacggg atggcggtaa aacgtggact
     3841 gcgatccaaa ataatttgcc tgaacgcgga accgtttatt gcatggctga agaccacgta
     3901 aatccggatc ttcttttcgc gggaacagaa tttggagttt acttttcaat agatggaggc
     3961 ggcaagtgga ttcagttaaa aggcggcttg ccaacgattg ccatcaggga tatggagatc
     4021 caaagaagag acaacgacct ggttgttgca acttttggaa gaggatttta tgtgcttgac
     4081 gactacacgc cattgcgaac gctgacatca tctgactttc agaaaacggc tttcatttca
     4141 cccgttagaa attcatggat gtatgtagaa tcaatgccat tgggtcttcg caacaaaggc
     4201 ttccagggag agagctactg gagtgccccg aatccaaaac caggtactgt atttacttat
     4261 tatttgaaag atgatctgaa gacattaaaa gaaaaaagac aagaggcgga aaaacaaaag
     4321 ataaagattg gcgacccggt ctattatcca tctttggata cattgcgact tgaagacata
     4381 caacctgccc cctacttgct tttcacgatc acagacgacg cgggaaatgt ggtgagaaga
     4441 ttaaaagcgc cggcaaagaa gggaatcaac cgcatcagtt gggattttag aaatgacaca
     4501 aaagttccgg tggatttcac accattcgac gagtcgaatg tattcagcaa tcctgacaga
     4561 gggacgctcg tagttcctgg tacctataaa gtatcgatgc aaaaattcga agacagtgtg
     4621 tataccgagt tagtttcccc ggtgtcgttt agaattgagg cattgaacat gatacacatg
     4681 cctgtcgccg acaaaaaagt tctatacgat ttcggcatga aggtagaaga actgcaaaga
     4741 gcagttgccg ggacaaacgt ttatgcggac gaattgcgaa acaagttgaa gtatatgaag
     4801 caagctgttt tgcaaacgcc tgcaatggac gcatcggtga tgaaacaaat gatcgtactg
     4861 gaaagaagat taacggaggt agacaaaatc ttgaacggcg atgcaagcct aaccaggaga
     4921 gagtttgaag caccaacttc gctgaatagt cgaataggaa gtatcatgga tggattggtg
     4981 agcactacta ctgctgcaac aaacacattc atgaattctt ataacgatgc tgcaaggcaa
     5041 tttgcaccgg tttctacgga ggttaaaaat atcgacgcag aaattaaaaa gcttgaactg
     5101 gttttggaac aaaacaaggc gccttatacg ccgggcaggc tccctcagtg gaaccagcaa
     5161 tagacttgga gacagatata agatggttac attggaagag accgtgcatg tgtatgagca
     5221 gctcgaaaaa gcggcactcg ctgttctacg aggcaccggt catcctttgg aaaaagcgga
     5281 tgtttcgctg ttagattttt taattcgccg aatgcttatt caaaccgcag aataaaacag
     5341 aagctgtcca aactttcgaa aacttaaata aatatattta ccgacaaaat tttaatgcat
     5401 gaagaagtat ctcattcttg cgggcctttt cttcgctggt tttgttctct caaactgtca
     5461 tacgtcaaga aaagcgaccg catc
//
LOCUS       DASQJI010000255         1844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1408910,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000255 DASQJI010000000
VERSION     DASQJI010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408910"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VEV83_07250"
     CDS             complement(<1..180)
                     /locus_tag="VEV83_07250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44946.1"
                     /translation="MKRRFLRCVWAGLFNSHRLFIALGLAIIFQCHGLKSKAQTTYWV
                     ESMSNTVKKENVATPP"
     gene            complement(241..1155)
                     /locus_tag="VEV83_07255"
     CDS             complement(241..1155)
                     /locus_tag="VEV83_07255"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HYK44947.1"
                     /translation="MKVAVISNSELCIPLLQYLKLNQVQTVFYLGSYQAGADISSLIS
                     FCNVNRIAVEVEKKSAQLFSWLSAQNPDYGFVFGYKRLIDVERLGEFKKKIFNIHPGR
                     LPQYRGASPVFWQLKNGEDALGITIHFLNERYDAGETVWSKEIGNEPHFSYGLAELIF
                     SNVLTEGVRHVLSSGIDQLHKQKSVQDERFASTYKKPGLNDVLINWQTMPAKNVVDLV
                     RACNPWNKGAITVYNGIEVKIIDAELAGTETNESPGTILEVGNAILVACAGNSAVKIN
                     SVNANGIFVPARFAEKFGFIAKQRFGLS"
     gene            complement(1201..1728)
                     /locus_tag="VEV83_07260"
     CDS             complement(1201..1728)
                     /locus_tag="VEV83_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HYK44948.1"
                     /translation="MEGYIAEIRLFAGNYAPRAWAFCDGRILPIAQNTALFSILGTTY
                     GGNGVTTFGLPDLRGRVPVGPGQGPGLPEVVQGEIAGVHDVTLVTDNMPAHSHSVSVN
                     DDTTSMATTGAGNYLNTKTESGESVAASGLSSPAVLNPATIGNTGGNQPFSIMQPYNG
                     LYYIICIEGIFPSRN"
BASE COUNT          483 a          446 c          376 g          539 t
ORIGIN      
        1 agggggcgtt gcaacatttt ctttttttac tgtgttgctc attgactcga cccaatacgt
       61 ggtttgcgct ttgcttttta aaccatggca ctgaaagata attgcaagcc caagtgcgat
      121 gaatagccta tgtgaattaa ataagcctgc ccaaacgcaa cgtagaaatc ttcttttcat
      181 gtaccgggta ttattcatga ctttaatctt tttaaagcaa ctgcaacccc gccggctaat
      241 tcaggaaagg ccgaaacgtt gctttgcaat gaatccgaat ttttcggcga accttgccgg
      301 cacgaatatt ccatttgcat tcacagaatt tatttttaca gcgctgttgc ctgcacaagc
      361 aaccaatatc gcattcccaa cttcaagaat agtcccgggc gattcgtttg tttctgtgcc
      421 tgcgagttct gcgtcgatta ttttgacctc gataccatta taaacagtaa tcgctccctt
      481 gttccaggga ttgcatgctc tcacgagatc aacgacattt ttagcaggca tggtttgcca
      541 gtttatcagc acatcattca acccaggttt tttgtaggtt gatgcgaacc tttcatcctg
      601 aactgatttt tgtttgtgaa gttgatcaat tccggaactc agtacatgcc gcacaccttc
      661 cgtcaacaca ttactgaaaa taagttcagc caacccataa gagaaatgcg gttcattgcc
      721 tatttcctta ctccaaacag tttcgcctgc atcatacctt tcgtttaaga aatgaattgt
      781 tatacccaac gcgtcctcgc cattctttag ctgccagaaa acagggcttg ccccccggta
      841 ctgcggcaac ctgcccgggt gtatattaaa gatcttcttt ttgaattccc ctagtcgctc
      901 aacatcaatt aatcttttgt agccgaatac aaaaccataa tccgggtttt gtgccgaaag
      961 ccacgaaaac aattgagcag actttttttc aacttcaaca gcgatacgat tcacattaca
     1021 gaacgagatc aaagaactta tatcggcgcc cgcctgatac gaacctaaat agaacaccgt
     1081 ttgtacctgg ttcaacttta aatactgtaa aagcgggatg cataattcag agttggatat
     1141 aacggcaacc ttcataggtt caatacaagt tattacgatg agcttatatg cgacatacgt
     1201 ctagttgcgg cttggaaaaa taccctcaat acagatgatg taatacaggc cattgtatgg
     1261 ctgcataatt gaaaatggtt gattccctcc ggtgttaccg atcgttgccg gattcagcac
     1321 agccggcgac gagagtcctg atgccgccac agattctccg ctttccgtct tagtatttaa
     1381 ataattgccg gcgcctgtgg ttgccatact tgttgtgtca tcattcaccg acacagaatg
     1441 gctgtgtgcg ggcatgttgt cagtgaccaa tgttacatca tgaacaccgg cgatttcgcc
     1501 ttgcactacc tccggcaatc cgggaccctg gccaggaccc accggaaccc tgcccctcag
     1561 atccggtaaa ccgaatgtgg ttactccgtt tcctccatag gtagtgccaa ggatcgagaa
     1621 cagagccgtg ttttgggcga taggtaagat tcggccatca caaaatgccc aggcgcgtgg
     1681 agcgtaattg ccggcgaaca atcttatttc cgctatatat ccttccatga gattttcttt
     1741 ttggttgtta tcactaaaaa ttgaatcgcg ttattatagg ttagtttttt cttttagttg
     1801 cgagttgggt agatgccttc aacacaaatg ataaaggcca gccc
//
LOCUS       DASQJI010000256         6327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1869918,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000256 DASQJI010000000
VERSION     DASQJI010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6327
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1869918"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VEV83_07265"
     CDS             <1..265
                     /locus_tag="VEV83_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK44949.1"
                     /translation="ELLRSELRKLNSPFISTVRGKGLLNAIVIDHPNKEAAWELCIAL
                     KENGLLAKPTHGDKIRFAPPLIITKSQIMECVDIISDSLVCLE"
     gene            636..2999
                     /locus_tag="VEV83_07270"
     CDS             636..2999
                     /locus_tag="VEV83_07270"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK44950.1"
                     /translation="MKTLFYTSVFMATLFTYCMKSNAQNTFPSTGSAGIGTTTPNASS
                     ILEIKSTTQGMLTPRMTATQRNAIGSPATGLMIYQTNSTPGFYYFDGAQWTSIAGANK
                     TLSNLSSTKVNVNLAPIADDSLNLGSATYSWKSLYLDSSLYLGGNRFLAYVCGSGVNN
                     TAAGVLALKKNNTGYDNTATGYNTLFSNTSGYHNTANGEIASYKNTTGNANTAIGVSA
                     LYSNTTGSNNTAVGDLALTSNAASGNTAVGAGALANNTTADGNTATGFNSLYNNSTGN
                     RNTSNGYDALYSNSTGYENTVSGYKAFYSNTTGVKNTAMGSNALYSNSSGGGNTAVGE
                     SSMYSNTTGSSNTAFGNGTLVSNTTGYSNAATGYYALAINSTGKNNTASGYYALYNNI
                     VDDNSANGSSALFNNTTGYGNTANGSAALYSNSLGGYNSANGYYALYNSNGYSNTANG
                     ADALYGNTSGGANTANGTDALSSNATGSYLTGDGYFTDVNADGYSNSTAIGSYALITA
                     SNQVRIGDSYVISIGGYANWTNVSDGRVKKNIKENVPGLSFINKLKPVTYNLDLDAAD
                     NIVQKPQIKTDQKILPRPAELAERTQKEKIIYSGFVAQEVEKAAKEIGYDFSGVDAAK
                     NDKDLYGLRYAEFVVPLVKAVQELSDQNDQLKKHYEGQIADLQKQIDALKALINSRDH
                     MQTATNNLSVTVGASLGQNIPNPFNHTTTIQYSLPQRFSSAKIIVTDKTGKLLKEVNL
                     GSPPGKGNSNNSGNIMVDASTLSSGAYQYSMLVDGKLIDTKQMVVTK"
     gene            3367..5115
                     /locus_tag="VEV83_07275"
     CDS             3367..5115
                     /locus_tag="VEV83_07275"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK44951.1"
                     /translation="MKTKIYLAIILLVPVAFAGRVYAQANQTLSNLNSPTKVNVSLLP
                     DLNNKHALGSAANSWSSLYLDGSLFLANKRFLAYKTGAGTGNTAVGIQVLYSNTSGHS
                     NTGTGDSALFSNTEGYENTASGYRTLYANIAGHANSAFGMLALQNNNGHYNTAVGSNA
                     MSANTTGSANVAVGTASLSANTIGAYNTSSGVASMGLNTIGNSNTAYGFQALNTNIRG
                     NANVAIGAWALNKNENMSNLVAVGDSALLNLNSYWCTAVGSKAGMNTTTGSKNTYLGY
                     HAGITVTTGTNNTLIGATADVTSTTITNATAIGSSATVNASNKVRIGNSSVTSIGGEV
                     GWTNFSDERIKTGVQQNVPGLRFINLLNPVTYHFDLNKEEKILYKKRPEDFTGKYDIQ
                     KMQFTGFLAQEVETAAKKIGYDFSGVDAPANENDLYGLRYSEFVVPLVKAVQELSKAN
                     DEKDARIESAEAKLSDLQKQIDELKAMLVARNLMQAETGNVLLSRTDASLSQNTPNPF
                     NHTTTIDYTLPQKYSSAKIIVVDELGKTIKAFDLSGTGKGSVTFSSPIRVGASYQYSL
                     YVDGKLIGTKQMVLSK"
     gene            complement(5682..>6327)
                     /locus_tag="VEV83_07280"
     CDS             complement(5682..>6327)
                     /locus_tag="VEV83_07280"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK44952.1"
                     /translation="ADQKIRVIIFEDNKHLRESLHLLISSSVQFECIAAFADTRNILP
                     NITKLMPEIVIMDIEMPGMNGIDATHLVKQKFPELPILILTVFNDSERIFQSLKAGGN
                     GYLLKNSSPDEILNAMMEVYHGGTALSPAVARKLVQFFQSGAVEAQNDYHLTPKEKEL
                     LHFLVDGKSYKMIADAMQVSLETVKSHVKNVYRKLHVSSNSEAVAKAIKQRIVE"
BASE COUNT         1943 a         1367 c         1398 g         1619 t
ORIGIN      
        1 cgagttattg cgaagcgaac tgcgtaaact caattctccg ttcatttcaa ctgttagggg
       61 aaaagggttg cttaatgcaa ttgtaataga tcatccaaac aaagaagctg catgggaact
      121 gtgcattgcg ctcaaagaaa acggtttatt ggcaaaacca acgcacgggg acaagatccg
      181 gtttgcgccg ccattgatca tcacaaaatc acagatcatg gaatgtgtcg acattatcag
      241 cgattcactt gtttgtttgg aataattcaa aatactttgc aaggcacgga acggtaatag
      301 ccatccaacg tcagcttacg tattcttcac gcactgaaat tcgatttaaa agttaatctc
      361 aaaacgggtg tctgatcgcg cgcttcatca aagaagcttc gtccggccat atacaattcc
      421 atcggaaaac ttttgacggc ttcttgcacc ggtgcaatgc accttcactg aaacgaaacc
      481 attgcatgat atcccttgat ctcaaataaa tgcagactag tttgggagag ctccggacaa
      541 gaccggacat tttttgttca ttcgaattat tcgtaccttt tccgttctgc taaaaatttt
      601 cccaacagtt cttttacata cctaaattga aaattatgaa aacacttttc tacacttctg
      661 ttttcatggc aacgcttttt acgtactgca tgaaatcaaa tgcgcaaaac acgtttcctt
      721 caacaggcag tgcaggcatt ggtacaacca caccaaacgc atcttcaata cttgaaataa
      781 aatcgactac gcaagggatg cttactccga ggatgactgc aacgcaacgg aatgcaattg
      841 ggtctccggc aaccggttta atgatctatc agacgaacag cacacccgga ttttattatt
      901 tcgatggtgc gcaatggacg tcaattgcag gagctaataa aacactaagt aatctcagtt
      961 caaccaaagt gaacgtgaac ctggcgccga tcgccgacga ttctttaaat ctcggatctg
     1021 ccacctactc atggaaaagt ttatacctcg acagttccct ttacctgggc ggaaaccgtt
     1081 ttctcgcata tgtatgcggc agcggtgtta ataacacagc ggccggggtg ctggcgctga
     1141 aaaagaataa taccggctac gataatactg caaccggtta caacacattg ttctcgaaca
     1201 cgtcgggata tcataacacg gcaaatggcg agatcgcgtc atataaaaac accaccggta
     1261 acgcgaacac cgcgattggt gtcagcgctc tgtattcgaa cacgacggga agcaataaca
     1321 ccgcagttgg tgacctggcg cttacgtcaa acgcagcgag cggtaacaca gctgttggtg
     1381 caggagcact tgctaataat acaaccgctg atggaaacac ggcaaccgga ttcaattcgc
     1441 tttacaataa cagcacagga aacaggaaca catccaatgg atacgatgcg ctttattcca
     1501 acagcaccgg gtatgaaaat actgtcagcg gctataaggc attttattca aatacgaccg
     1561 gcgtaaagaa tacggcgatg ggaagcaatg ccctttattc aaacagcagc ggcggtggaa
     1621 atacagcagt tggcgaaagc tcgatgtaca gtaacacaac gggatcttcg aacacggcat
     1681 ttggaaacgg tacgcttgtt tcgaatacca ccggctattc aaatgcagca acgggctatt
     1741 atgcgcttgc aataaactct accggtaaga ataatacggc tagcggttat tatgctttgt
     1801 acaataatat cgtcgacgat aactcggcca acggtagcag cgctcttttt aataatacca
     1861 ccgggtatgg caatactgcc aacggaagtg cggccttata ttcaaacagc ctcggagggt
     1921 acaattcagc aaacggttat tatgcgctct acaatagcaa cggctattca aatacagcga
     1981 acggagctga tgcgctctat ggtaatactt ccggcggtgc aaatacagcg aacggaactg
     2041 atgcgctttc ttcaaatgcc accggaagtt acctgaccgg cgatggttat tttaccgatg
     2101 taaatgcaga tgggtatagt aattctactg cgatcggaag ttacgctctt atcactgcct
     2161 caaaccaggt tcgcattgga gacagctacg taatatccat tggtggttat gcaaactgga
     2221 ctaacgtttc agacggcagg gtgaaaaaaa atatcaaaga gaatgtgccg ggtttatcgt
     2281 tcatcaacaa actaaaacct gtcacttaca atctcgatct tgatgcggcc gataatatcg
     2341 ttcaaaagcc tcagataaaa acggatcaaa aaatccttcc gcgtccggcg gaacttgctg
     2401 aacgtacgca aaaggaaaaa atcatttatt ccggttttgt ggcgcaggag gtggaaaagg
     2461 cagcgaagga aattggctac gattttagcg gagtagatgc cgcgaaaaat gacaaggatc
     2521 tttatggctt gcgttatgct gaatttgtag tcccgctggt caaagcagta caagagctat
     2581 ctgatcaaaa cgatcaattg aaaaaacatt atgagggtca gatcgcggat ctgcagaagc
     2641 aaattgatgc attgaaggcg ttgataaatt cccgggatca tatgcaaacg gcgactaata
     2701 atttatcggt aacggttgga gcatcgcttg gtcagaatat acctaatccg ttcaatcata
     2761 caacaacgat tcagtattct ttgccacagc gattttcttc tgctaaaata atcgtgaccg
     2821 acaaaacggg taaacttctg aaggaagtaa atcttgggag tccaccgggc aaaggaaact
     2881 cgaacaatag tggaaacatt atggttgatg cgtcgacttt gtcttcaggc gcttatcaat
     2941 attctatgct tgtcgatgga aaattgatag acacaaagca aatggtggtg acaaaatgaa
     3001 aaaaaatctg ctgcaaaaaa gcatccgacg aggttatgat cgtccacgtt tcaggatcga
     3061 gtacatgata caacaaacta taagcgaaaa ttttcggagc tcgtggtgat cataagtttg
     3121 acagcccctt ctttgagaaa catcggggag aagaaactgg atcccgatta ttcgtatttt
     3181 ttcgtaaact ttatcgctgg gttcggttta tcaattgaat gacgaagatc aaataatcac
     3241 atgctacggt ccgctttatg aaacgacgcg gttccagaaa accaattcag atcgcacact
     3301 tgttataaca taatttcgaa ttatatcatc agtaacttct ctgccacgca ggggaaaata
     3361 ttttttatga aaacgaaaat ctatctcgct attattttat tggttcctgt tgcttttgcg
     3421 ggtcgcgtgt acgcgcaggc aaaccagact ctttcaaatc taaattcccc aacgaaagtg
     3481 aacgttagct tgttgcccga tcttaacaac aaacatgcac tcggttctgc cgcgaattcc
     3541 tggagcagtt tgtatctcga cggatctttg tttctcgcaa acaaaagatt cctggcgtac
     3601 aaaaccggcg caggcactgg aaacactgct gtaggcatcc aggtcttata ctcgaataca
     3661 agcggccatt ccaataccgg caccggcgac agtgccttgt tttctaacac cgaaggttat
     3721 gagaatacag cttcgggata ccgcacgtta tatgcaaata ttgccggcca cgcgaacagc
     3781 gcgtttggca tgttggcttt acagaacaat aacggacatt acaatacggc cgtcggatct
     3841 aacgccatgt ctgctaacac gaccggctct gcgaacgttg cagtaggcac cgcttcgtta
     3901 tcggcaaata ccatcggtgc atacaatact tccagcggtg tggcttcaat gggcttgaac
     3961 acgatcggca atagtaatac cgcatacggg tttcaggcgc ttaataccaa catacgcgga
     4021 aacgcgaatg ttgcaattgg agcatgggct ttgaacaaaa acgagaatat gtccaacctc
     4081 gttgcggtgg gtgattctgc gctgctaaat cttaattctt actggtgcac cgcagtgggg
     4141 tcaaaggcgg gtatgaatac tacaacgggc agcaagaata cttaccttgg gtatcatgca
     4201 ggaatcactg tgactaccgg gactaataac acgcttatag gtgccaccgc agatgtaacc
     4261 agcaccacaa ttaccaatgc tactgcaatt gggagttctg ctacggttaa tgccagcaat
     4321 aaagtgcgaa tcggcaacag ctccgtaacc tcgatcggtg gtgaagttgg gtggacaaat
     4381 ttctctgacg aaagaataaa aacaggcgta caacaaaacg tgccgggatt aagatttata
     4441 aatcttctta acccggtcac ttatcatttt gatctgaata aagaagaaaa gattttgtac
     4501 aaaaaaagac cggaagactt taccggaaaa tatgatatcc agaaaatgca attcacgggc
     4561 tttcttgcgc aggaagtaga aacggctgca aaaaagatag gttacgattt cagcggcgtg
     4621 gacgcacctg caaatgagaa tgacttgtat ggattacgtt actcggaatt tgttgtgccg
     4681 cttgtaaaag cagtgcagga attatcgaaa gccaatgatg aaaaagatgc caggatcgag
     4741 tcagcggaag caaagctcag cgatctgcaa aaacaaattg acgaattgaa agcaatgctt
     4801 gttgcgcgga atctcatgca ggcggaaact ggcaatgtat tactatcaag aactgatgct
     4861 tcgctctcgc aaaatactcc gaatcctttc aatcatacaa caacgatcga ttacacttta
     4921 ccacagaaat actcatccgc gaaaattatc gtcgttgatg aattaggcaa aacaataaaa
     4981 gcctttgatc tgtccggaac cggaaaagga agcgtgactt tttcttctcc gatcagggtg
     5041 ggggcatctt atcagtattc tttatatgtt gatggaaaat tgattggcac aaagcagatg
     5101 gttctgtcga aatagcgacc gccaggaagc cagaaacaag agccaaataa caagaagcaa
     5161 gaaacaaaat aacaaacaac acggaaataa tgagaaccgc tgcgcaaaag cggttattat
     5221 attatcatga ctgttttgtg agacagcatc aactgcctcg ttgtgttcgt tgtgtgttct
     5281 tcgtgtccat tgtgttccaa aaccggggca ccaggatcac gagggatcac aacggccgaa
     5341 agattttgtg agacgagagc agcgccttag tttttcggaa tgatgcagaa gaagtaaata
     5401 atgaaaaaat aagaaacgaa aaacaagcaa taagaacgaa aaagcaaaga agcaaataag
     5461 tagatcaaca aaagaatcaa aagcaaaccg cttcgccaga gcggtttttt attttgcgct
     5521 tgtcaaaaat tttcctttgc ttatcgatcg acggagtaat aatctataat attaaaattg
     5581 ggcagcttca attcccggaa tatttttatt tgtcagacgc gggaaagata ttattcgtgg
     5641 gtaacgaatt atatcaaagt ttgtatctgt tgctgcgcgg cttactccac aattctctgc
     5701 tttatcgctt tagcgaccgc ctcggagtta ctgcttacat gaagttttct atacacattt
     5761 ttgacatggg acttcactgt ctctaaagag acctgcatcg catcggcgat cattttatag
     5821 cttttcccat cgacgagaaa atgcagcaat tctttttctt ttggagtaag gtggtaatcg
     5881 ttttgtgctt caactgcccc ggattgaaag aactgtacga gttttcgtgc gacagcaggt
     5941 gaaagcgcgg tcccgccatg atacacttcc atcatcgcat tcaatatttc atccggggaa
     6001 gaatttttga gcaggtagcc atttcctccg gccttaagcg attgaaagat gcgttcgctg
     6061 tcgttgaaaa cggtgagaat aagaataggg agctctggga atttttgttt aaccaaatgt
     6121 gtcgcatcga taccattcat tccaggcatt tcaatatcca tgatcacgat ctctggcatt
     6181 agcttagtga tattcggcaa aatatttctt gtatcagcaa aggcagctat gcattcaaat
     6241 tggacagatg aagatataag caggtgaagc gattccctca gatgcttatt atcctcaaag
     6301 attataaccc tgatcttttg atctgcc
//
LOCUS       DASQJI010000257         1866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2944326,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000257 DASQJI010000000
VERSION     DASQJI010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2944326"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VEV83_07285"
     CDS             <1..807
                     /locus_tag="VEV83_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44953.1"
                     /translation="QLEYRNSLGAPVFYTNSATGSGFFQGNLGIGTTPTFPLTFDNGL
                     GDKICLWANVTGTSYGIGVKNYLMQIHTDVKEADIAFGYGGSTSFNENFRFKGNGALA
                     VHGSVGSAGQVLMSNGDYPAYWGNIVPTFQFFSQTGEAMNLSSNPVNIPGINGKKFTT
                     NFDSKLMVTVSAEIQIDAGEPEQSILVSTLVKNSANKVIGSSSDYILMKPTKSHSVKR
                     NATATIFIGGAEKLPPATYSIACFVERINDTNTGKSRCANTQVIVQAIPQ"
     gene            882..>1866
                     /locus_tag="VEV83_07290"
     CDS             882..>1866
                     /locus_tag="VEV83_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44954.1"
                     /translation="MKTYIAAIAICLQFLSLKSTAQFTNSGAQITIEHGGLLYTSAGL
                     QNSFVGIIANNGTIISDSFITNNSACLISGGGTYKVQGNWKNSGTFSADTSKIIFFGK
                     GNSDITSGGAEVYDLQVNKNANGILNLKGVLKVLDKVEFSAPKNWIQLNKYVLTLDAN
                     CTTTGFNDKKFFITNDSGFLKKLYVAPSKFIFPVGFSKSSYNPLSIAEAANVDDYSVR
                     CLQHAQLNGGSGASITQGGIDVSWLVKEAEPGGADATIEANWYPSKGDELPGFDSSKC
                     MLVRYKSTGWDFSAAQAGPAYGTTVKTKRRSGITAFGYFTVLSTATPTLQGS"
BASE COUNT          568 a          400 c          423 g          475 t
ORIGIN      
        1 caacttgaat accgtaactc cctgggcgcg cctgtgttct acacgaactc cgccacaggt
       61 agtggatttt ttcagggcaa ccttggaatt ggcacaacac ccactttccc attaacgttt
      121 gacaacggcc ttggcgataa gatctgcttg tgggctaatg tcaccggcac tagctatgga
      181 atcggagtaa agaactactt gatgcaaatt catacagatg tcaaagaggc cgatatcgcg
      241 tttgggtatg gcggtagtac atcgttcaat gaaaacttca ggttcaaagg caatggtgcg
      301 ttggcggtgc atggcagtgt gggttcggcc ggacaagtgc tcatgtccaa cggagactat
      361 cctgcttact ggggcaatat agtgccaaca tttcaattct ttagtcaaac cggagaagcg
      421 atgaacctct cctcaaaccc tgtaaatatt ccgggaataa acgggaaaaa gttcacgaca
      481 aattttgata gcaagctgat ggtcacggtt tctgctgaaa tccagataga cgcgggagaa
      541 ccggagcaaa gtattttggt atcgacactg gtaaaaaatt cggccaataa agtcataggc
      601 agttcaagcg attatatttt aatgaaacca acaaaatcgc attctgtaaa acgcaatgct
      661 acagcaacga tttttattgg tggcgcagaa aaactgccac ctgctaccta ctctattgcc
      721 tgcttcgttg aacgaataaa tgatacgaac acaggaaaaa gcagatgcgc taatacgcag
      781 gttatcgtac aggcaatacc tcaataaagt ctcctcattt ttcactggtt ttgcgaaacg
      841 tcttataggt attgcaattg ataaaacaaa aaaactgaac aatgaaaact tatatagccg
      901 ccatagctat ttgtttacaa tttctttctt taaaaagcac ggctcagttt acaaatagcg
      961 gtgcgcagat cacaattgaa catggcggcc tgttatacac gagtgcaggc ttacaaaatt
     1021 cattcgtggg catcattgca aacaacggca ctattatttc tgactcattt attacaaaca
     1081 atagcgcatg tttaatttct ggcggaggca cttataaagt tcagggcaac tggaaaaatt
     1141 caggcacctt ttcagctgac acttcgaaaa tcatattctt tggaaaaggc aattcagata
     1201 tcacttcggg cggcgcagag gtgtatgacc tgcaagtgaa taaaaatgca aacggcatac
     1261 taaacctgaa gggcgtgctt aaagttttgg acaaggtcga atttagtgcg ccaaaaaatt
     1321 ggatccagct aaataaatat gttcttacac tagacgcgaa ttgcaccacc acgggtttta
     1381 acgacaaaaa attttttata acgaacgact ccgggtttct aaagaaattg tacgtcgccc
     1441 cttcaaaatt catctttccc gtaggcttta gtaaatcaag ttataatcct ctctcaatag
     1501 ccgaagcggc gaatgtagac gactattcag tgcgctgcct tcagcatgca cagttaaatg
     1561 gcggttcagg tgcatcgata acgcagggcg ggatcgatgt gagctggctt gtaaaagagg
     1621 ccgaaccagg aggtgctgat gcaacgatcg aagcaaactg gtatccgtcg aaaggtgacg
     1681 agttgcccgg cttcgattcg tcgaaatgta tgctggtaag atacaagagc acaggctggg
     1741 attttagtgc ggcgcaggca gggcccgcat acggcacaac tgtaaaaaca aagagacgaa
     1801 gcggtattac tgcgtttggt tatttcacag ttctttcaac tgctacccca acactgcaag
     1861 gttcaa
//
LOCUS       DASQJI010000258         8554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_180213,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000258 DASQJI010000000
VERSION     DASQJI010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8554
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180213"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..2880)
                     /gene="cphA"
                     /locus_tag="VEV83_07295"
     CDS             complement(238..2880)
                     /gene="cphA"
                     /locus_tag="VEV83_07295"
                     /EC_number="6.3.2.29"
                     /EC_number="6.3.2.30"
                     /inference="COORDINATES: protein motif:HMM:NF010623.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0051235 - maintenance of location [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HYK44955.1"
                     /translation="MKIEEIKVLRGPNYWSVRRPKLIQMRLNLEELEQRPTNTIDGFL
                     ERLQKLMPSLYEHRCSEDAPGGFFSRVKDGTWMGHVIEHLALELQTLAGMEAGFGRTR
                     GVGEEGVYFVVFDYVEEDAGIYTAKAAVRLAQALVDGEDYNIEEDIQRLREIREDTRL
                     GPSTGSIVEEAAKRGIPYIRLNKQSLVQLGYGIHQKRIRATIASTTSTIAVDLAGDKD
                     ETKHLLETAQIPVPKGTVIRTEEGLKDAIDRLGYPLVIKPIDGNHGKGNTTNITSWEQ
                     AVKALEAAQRYGSKAIVEKFITGVDFRVLVINYKFICAALRTPASVIGDGEHTIQSLI
                     DQTNKDPRRGYGHEKVLTQITIDQFTQKMLDEKGYTLETIPPKGELVLLKPTANLSTG
                     GTSTDVTDEMHPINIFMAERIARIIGLDICGIDIMAPDLKTPITENGGAVLEVNAAPG
                     FRMHVEPAEGLPRNAAEPVIDMLFPKGSNGRIPIIAITGTNGKTTTTRLTAHLCKTAG
                     KKVGYTTSDGVYIQNQMMMKGDCTGPVSAKFVLSDPTVDFAVLECARGGLLKSGLAFD
                     KCDVAIVTNVTADHMGLNGINTLEQMARVKSVIPETVREGGFAILNADDDLVYKMHEE
                     LECNVAYFSMDENNPRIKAHCKKSGYAAVYENGYVSILKGTWKIRVLKANDIPITYDG
                     KALHNVMNTLPSVLAAYLFRDISIEDIRSGLSTFVPSAAQTPGRLNMFEFRKCKFLVD
                     FAHNPAGLELLGNFLSKMEGSPKVGIISGTGDRRDDDIRELGSISARFFDEIIIRCDK
                     NLRGRTAEEIVNLLVEGIDSAKTRDIPTKIIYREQDAITYAYENATPGSLITIMCDVV
                     SEALDFIKGLKEKEDALVLADKIA"
     gene            complement(3092..5596)
                     /locus_tag="VEV83_07300"
     CDS             complement(3092..5596)
                     /locus_tag="VEV83_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase/topoisomerase IV subunit A"
                     /protein_id="HYK44956.1"
                     /translation="MADSKNVISTETGVQGQYKSWFLDYASYVILERAVPAVEDGLKP
                     VQRRILHAMKEMDDGRFNKVANIIGQSMQYHPHGDASIGDALVNMGQKELLIETQGNW
                     GDVRTGDDAAAPRYIEARLSKFALEVAFNAKTTEWQLSYDGRKQEPVTLPMKFPLLLA
                     QGADGIAVGLSTKILPHNFNELCEASVKYLRGKRFELYPDFQTGGMADVTNYNEGKRG
                     GKIKVRAAIEELDKKTVVIRNIPYGITTATLMESIVKANEQGKIKIKKVTDATAKHVE
                     IIIELAPGISPDITIDALYAFTDCELSISPNACVIAEQKPRFLGVHELLKTSVDHTKD
                     LLKSELEIRLGDLEDKWHYTSLEKIFFEEKIYKELEKKHATWEKVIEAIDKAFDPFKK
                     RLKREITREDILKLTEKPVRRIYKLDIDDLNAQIKEIEENIKQVKYDLAHLTDFAVAY
                     FENLQKKYGKGRERKTEIKLFDTIQARQVAIANTKLYINREEGFIGTTLKKDEFLCEC
                     SEFDDIIAITKQGSMKVVKVADKTFIGKDILHAAVFQKNDERTTYNMIYVDGQSGTSY
                     AKRFNVTGVTRDKEYDLTKGTDKTKVHYLSVNPNGEAEVVKVTLSPNCSARIKEFDFY
                     FETLDIKGRSSMGNQVTKYPVRSVKFKEKGVATLAGRKLWFDNIYGRLNADEKGMPLG
                     NFEPEDKILVIYKDGSYELTDLELTQRFEPGKMMMIEKFNPEKVITAVYADVDKKQYY
                     VKRFNIETTSLHNKFFFIKEDPAIVLETVTTAADPVLYFEKGRGAQIQKIKYKIGKNV
                     EITGWKTVGTRFEDYSKSVKMSWVEQGGNPQGKLFE"
     gene            complement(5842..6225)
                     /locus_tag="VEV83_07305"
     CDS             complement(5842..6225)
                     /locus_tag="VEV83_07305"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK44957.1"
                     /translation="MASERKFDLEDRIIDFSSRVIDVVEALPNSRAGNYIAAQLIRCG
                     LAPSLMYGEAQAAESRDDFIHKMKLLAKEFKETRVCMKLISKKAMIRPEAKIESLRNE
                     NDELIAIVCKSIETAKRNNRKAVKN"
     gene            complement(6466..7314)
                     /locus_tag="VEV83_07310"
     CDS             complement(6466..7314)
                     /locus_tag="VEV83_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1835 domain-containing protein"
                     /protein_id="HYK44958.1"
                     /translation="MLHVVFQYSDIETLHKAIELDESLKGEVIEIQDELAVGPIADIF
                     TEEGQANRNEWWQKVMEFSPYVELVAGIDDRKKVNAIKERLSADDAEQLWIWVAPNPH
                     DVCGYYWLISQLRDYEGRIHILFLNNLPFINDKGSIFYPESVFEIPPREFLKAKKLAR
                     PITTSEFELDTDEWNKLCRENAMVRRLEGGKKIVSKEASYFDKDILKAITAEDQKLQK
                     IFHTIFSKIKVRTGDAFLAWRMRQLIDEGKIEMTGDWKNGWKEVALKLPAVVPGDEKA
                     ELDVTV"
     gene            complement(7343..>8554)
                     /locus_tag="VEV83_07315"
     CDS             complement(7343..>8554)
                     /locus_tag="VEV83_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HYK44959.1"
                     /translation="ELRYPIIHLKAEDIEAAISHHSDYGEDIFSFVNGQYTTQGGTHQ
                     QAFREAYVKAVRDFYKKDYEAADIRQSIVAAISVRVQEPVFESQTKTKLGSQSISEGG
                     PSMKNFVQDFLSKELDNYLHRNPQTAEALKKRIEQSERERKELAGIKKLANERAKKAN
                     LHNKKLRDCHVHLNDDPPSKGKQEYIASQNASTIFITEGDSASGSITKARNVETQAVF
                     SLRGKPLNCFGLTKKIVYENEEFNLLQHALNIEDGLEGLRYNNVVIATDADVDGMHIR
                     LLLMTFFLQFFPDLVKKDHVHILETPLFRVRDKKETIYCYDESEKQAAIKKLGGKPEI
                     TRFKGLGEISPGEFERFITENMRLQPVILEQGEHIQQLLEYYMGKNSQERQEFIINNL
                     RVELDLVEENP"
BASE COUNT         2131 a         2069 c         1622 g         2732 t
ORIGIN      
        1 gattccatga atggtcaact tagtgaaact ttctgccttt gagccttcgt ggtttgccgc
       61 ttgaaaccac aaagccacaa ggacacaaag gagtacacga agaaaaatag attgcacttt
      121 tagaatcaat agcacaacac gttataagtt agataataaa tatgcggcgg ctcatcattt
      181 tctttggaat aaaggaaaag tctgtgaact tttagctttg taggcaccca tctagcgtta
      241 agcaatttta tcagcaagta ccaaggcgtc ttccttttcc ttcaatccct taataaaatc
      301 gagcgcctcg gaaaccacat cgcacatgat cgtaattaac gaacccggcg ttgcattttc
      361 atacgcatag gtgatagcat cctgttcgcg gtaaattatt tttgtcggaa tatctcttgt
      421 ctttgcagag tcaattcctt cgaccagcaa attcacgatc tcttcagctg tgcggccacg
      481 taaattctta tcgcatcgaa ttatgatctc atcaaaaaat cttgcggaaa tacttccaag
      541 ctcgcgaatg tcatcatccc gcctgtcgcc tgtgccgctg atgatgccca ccttcggact
      601 tccttccatc ttgctcagga aattgccaag cagttcaaga ccggccgggt tatgtgcaaa
      661 gtcaacgaga aatttgcatt ttctgaattc aaacatattg agtcttccgg gtgtttgtgc
      721 agcagaaggg acaaaagtgc tgaggcctga cctgatatct tcaattgaga tatcgcggaa
      781 caggtaagct gccagtacgg aaggcaacgt attcattacg ttgtgcaacg ctttaccgtc
      841 gtaggttatg ggaatatcgt ttgcttttaa cacgcggatc ttccaggtgc ctttcaatat
      901 tgaaacatac ccattctcgt acactgcagc atagccgctt tttttacaat gagcttttat
      961 gcggggatta ttttcatcca tactgaaata agcaacattg cattcaagct cttcatgcat
     1021 tttatatacg aggtcatcat cggcattcag aatcgcaaag ccgccctccc tcacagtttc
     1081 cggaatcacg ctttttactc tcgccatttg ctcaagcgtg ttgataccgt ttaatcccat
     1141 gtggtcagca gttacgtttg ttacgatcgc aacatcgcac ttatcaaacg ccaaacctga
     1201 tttcaataat ccacctcttg cgcattcaag cacagcgaaa tcaacggtcg gatcgcttaa
     1261 tacaaatttt gcactcaccg ggcctgtaca atcacccttc atcatcattt gattttggat
     1321 atacactccg tcgctcgtgg tataaccaac ttttttcccc gccgttttgc ataaatgtgc
     1381 cgtcagcctt gttgtagtag tcttaccatt tgtgcctgtg atcgcaataa taggaatgcg
     1441 gccattgctt ccttttggaa atagcatgtc gatcactggt tcagcagcat tgcgcggcaa
     1501 cccttcggcc ggttcaacat gcatgcggaa accgggtgca gcatttactt ccaaaacagc
     1561 gccgccattt tctgtaatgg gtgtcttaag atcaggcgcc atgatgtcga tgccgcaaat
     1621 gtcaagtcct ataatgcggg cgatgcgttc agccataaaa atatttatgg gatgcatctc
     1681 atcagtaaca tcagttgatg ttccaccggt cgaaagattt gcagtaggtt ttaatagcac
     1741 caattctcct ttgggaggaa ttgtttctaa tgtatatcct ttttcatcca gcattttttg
     1801 ggtaaattga tcgatggtta tttgtgttag cactttttca tgtccatagc cacgccgcgg
     1861 atctttgttt gtttgatcta tcaacgattg gatcgtgtgt tcgccatcgc cgataacact
     1921 cgccggagtt cggagtgctg cgcaaataaa tttgtaattg ataacaagca cgcggaagtc
     1981 aacgccggtg ataaattttt caacgatcgc cttgctgccg tagcgttgcg cagcttccag
     2041 cgctttcacc gcctgctccc atgacgtgat atttgtagta ttgcccttac catgattgcc
     2101 atcgatcggt ttgatcacaa gtgggtaacc caaacggtcg atcgcatctt tcaagccttc
     2161 ttcagttcgg ataacagttc ctttcgggac aggaatttgt gcggtttcca ataaatgttt
     2221 ggtctcgtcc ttgtcgcctg ctagatcaac tgcgatcgta gaagtggtgc ttgcgattgt
     2281 ggcgcgaatt cttttttgat gtatgccata acctaattgc acgaggctct gtttattcaa
     2341 acggatataa gggatcccgc gttttgccgc ctcttcaaca atggatcctg ttgacggacc
     2401 gaggcgcgtg tcttcgcgta tctcacgcaa tctttgaatg tcttcttcaa tattgtagtc
     2461 ttctccatcc accaaagcct gcgccagccg caccgccgct tttgcggtgt agatgcctgc
     2521 atcttcttct acgtaatcaa acacgacgaa ataaacgcct tcttcaccaa cgcccctggt
     2581 acggccaaac ccggcttcca ttcctgctag cgtctgcaac tcgagagcca ggtgttcgat
     2641 cacatggccc atccatgttc catcctttac gcgactaaaa aatccaccgg gtgcatcttc
     2701 gctgcagcga tgttcataaa ggcttggcat taacttctgc aggcgctcca aaaaaccgtc
     2761 aattgtgttt gtgggccgtt gctcaagctc ttcgagattg agacgcatct ggatcaattt
     2821 cggtcgacga acactccagt agtttggtcc cctgagaact ttgatttcct cgatcttcat
     2881 aaacgatttt ttatgccagc gactgattgt atcttaagct ccggttgcgt agccctcgca
     2941 taaacagcca ttcagctgag cgcgcttata cgctcaaagt ccatgcagca aaactctctc
     3001 gtcgctgttt gctaatataa agaatctggc attagtgcaa ggaaatctta tgatcggagt
     3061 tctcgaaaaa atttaaggaa ttgagccgcc gttattcaaa caactttcct tgtgggtttc
     3121 cgccttgttc aacccacgac atcttgactg atttgctgta atcttcaaac cttgtcccaa
     3181 ctgttttcca gcctgtgatc tctacattct ttccgatctt atattttatt ttctgaattt
     3241 gtgcgcctct tcctttctca aaatataaca ccggatcggc ggcagtagta acagtttcga
     3301 gcacgatcgc aggatcctct tttataaaaa agaatttgtt gtggagactt gtcgtttcaa
     3361 tgttgaaccg ttttacataa tattgttttt tatcaacgtc agcataaaca gcagtgatca
     3421 ctttttccgg gttaaatttt tcgatcatca tcatcttacc aggttcaaac cgctgagtga
     3481 gctcgaggtc ggttagttca taactgccgt ctttatagat aacaagaatt ttatcttccg
     3541 gttcaaaatt tcccaaaggc attcctttct cgtctgcatt tagcctgccg taaatattat
     3601 cgaaccacaa ttttctgcca gccaatgtgg ctactccttt ttctttgaac ttaacggaac
     3661 gcaccgggta ttttgtaacc tggttaccca tactgctgcg tcctttgata tcaagcgttt
     3721 cgaaatagaa atcgaattct tttattcgtg ctgagcaatt cggactgagt gttactttca
     3781 ccacttccgc ttcgccgttt ggattcacac ttaagtaatg cactttggtt ttatcagtgc
     3841 ctttcgtgag gtcatactct ttatctctcg taacacccgt aacattgaaa cgtttggcgt
     3901 agctcgtacc cgactggccg tcaacataga tcatgttata ggtggtgcgt tcatcgttct
     3961 tttgaaatac ggcggcgtgc agaatgtctt ttcctataaa agttttgtcg gcaaccttca
     4021 ccactttcat gctaccctgt ttggtgatag caatgatatc atcaaactcg gagcactcac
     4081 acagaaattc atccttcttt aacgtggtgc caataaaacc ttcttctcga ttgatgtata
     4141 atttagtgtt tgctatggcg acctggcgcg cctgtatcgt atcaaataat tttatctcag
     4201 tttttctttc cctgccttta ccgtattttt tctgaaggtt ttcaaaatag gctacagcaa
     4261 aatcagtcag gtgcgccaaa tcatatttca cctgtttgat gttctcctca atctccttta
     4321 tctgtgcatt gaggtcgtca atatcgagtt tgtaaattct tcttaccggt ttttcagtaa
     4381 gctttaagat gtcttcgcgt gttatctcac gcttcaatct ttttttgaac ggatcgaaag
     4441 ccttgtcgat tgcctcgatc actttttccc acgtcgcatg tttcttttca agctctttgt
     4501 atatcttttc ttcaaaaaat attttttcca gggaagtata atgccattta tcttcaagat
     4561 ctccgagcct gatctccagt tcgcttttaa gcaggtcttt tgtgtgatca accgatgttt
     4621 tcaacaattc gtggacccca agaaaacgag gtttctgttc ggcgatcacg catgcattag
     4681 gcgaaatgct caactcacaa tcggtaaatg cgtacaaggc atcgattgta atatccggcg
     4741 atatgccagg cgccaattcg atgatgatct ccacatgttt tgccgttgcg tcggtaactt
     4801 tcttgatctt gatctttccc tgttcatttg ccttgacgat agattccatc aacgtcgctg
     4861 tcgtgatacc atacggaata ttgcgaatta caactgtttt cttatcgagc tcctctatgg
     4921 cagcacgcac ttttattttc cctccgcgct ttccttcgtt gtagtttgtt acgtcggcca
     4981 tgccgccggt ttgaaagtcg gggtacaatt caaacctttt tccgcggaga tattttacgg
     5041 acgcttcaca cagttcatta aaattatgcg gcaggatctt cgtagacaaa ccgactgcga
     5101 tcccatcggc accctgcgca agaagcaggg gaaatttcat gggtaatgtg acgggttctt
     5161 gtttacgccc atcataactc aactgccatt cggtggtttt cgcattgaag gcgacctcca
     5221 atgcaaactt tgacaatcgc gcttctatgt aacgtggtgc tgccgcgtcg tcgcctgttc
     5281 tcacatcccc ccaattgccc tgcgtttcta tcagcaattc cttttgtccc atattcacca
     5341 acgcgtcccc tatagacgcg tcaccgtgtg ggtgatattg catactctgc cctatgatgt
     5401 ttgccacttt attaaagcgg ccatcatcca tttccttcat cgcatgcagg atacgccgct
     5461 gcactggttt caatccatct tccaccgcag gcacagcgcg ttcaagaata acatacgagg
     5521 catagtcaag aaaccaactt ttgtattgtc cctgtacgcc ggtttctgta gatattacgt
     5581 ttttagagtc tgccatgtca atgcaattga gcattgaata ttgagaattg gttattgatt
     5641 attttctaaa aaactaaaca ctcaatactc aacaatcaat aatcaatttt cgagttagat
     5701 ccttttaaga tagttcaact ctgccgagca agtgcgtccc agtgaacatt gaatattgat
     5761 tgattatttt ctaaaaagac taaacactca atactcaaca atcaatgctc aattttcaag
     5821 ttgcgtgcct ttcctcactg cttaattctt tacagccttt cgattgtttc tttttgcggt
     5881 ctcgatactt ttgcaaacaa tcgcaattaa ttcgtcgttt tcatttcgca atgattcaat
     5941 tttagcttca ggtcttatca ttgctttttt agagattaat ttcatgcata cccttgtttc
     6001 tttgaactcc tttgcaagta acttcatctt atgaatgaaa tcatctctcg actcagccgc
     6061 ctgcgcctct ccatacatta gtgaaggggc taacccacat cgaataagtt gagctgcaat
     6121 atagttgcca gctcttgaat ttggcaacgc ttctacaacg tctattactc tggaggaaaa
     6181 gtctataatt cggtcctcaa gatcaaattt tctttctgaa gccataaaac agttttttaa
     6241 gattagggaa taagatgtga gatccaattt acaaaatttc tgtttaattt ttgacagtgt
     6301 gttttgaagt ttaatggctc acgttcgcca attcaccgca gcaggacgtt gaacgttgaa
     6361 tattgagcat tgaatattga ttatccaaaa agcttaaaca ctcaatactc aacaatcaat
     6421 aatcaaattt caagtcttat cgaattttta aaaattttgt cccgcttaca ccgtaacatc
     6481 caattccgct ttttcgtctc cgggcacaac cgcaggcaac ttcaatgcaa cttctttcca
     6541 tccatttttc caatcgcctg tcatttcaat tttgccttca tcgatcaact gccgcatacg
     6601 ccaggcaaga aaggcgtcgc ctgttcttac ttttatttta ctgaaaatcg tatgaaatat
     6661 tttttggagc ttctgatctt ctgccgttat cgcctttagg atatccttat caaaataact
     6721 ggcctcttta ctcactatct tcttccctcc ttccaatctg cggaccattg cattctcccg
     6781 gcagagctta ttccattcgt ctgtgtccag ttcaaattca ctggtggtta tcggccgggc
     6841 taattttttt gcctttagaa attctcttgg cggtatctca aaaacacttt ccgggtagaa
     6901 gatgctaccc ttgtcgttaa tgaaaggaag attgtttaaa aacaaaatgt gaatacgtcc
     6961 ttcataatcc cttaactgac taataagcca gtagtacccg catacatcat gcggattggg
     7021 agctacccaa atccaaagtt gttcggcgtc atcggctgac aacctttctt taatagcatt
     7081 taccttcttc cgatcgtcaa tacctgcgac caactcgaca tacggagaaa attccatcac
     7141 cttttgccac cactcattac gattagcctg gccttcttcg gtaaaaatat cagctatagg
     7201 accaactgca agttcgtcct ggatctcgat gacttcacct tttaaacttt cgtcgagttc
     7261 aatggcctta tgcaaggttt cgatatccga gtattggaaa actacgtgta acatgaaaaa
     7321 taaaatcgta tagcgtgtaa ggttacggat tttcttcaac caggtctaat tcaacccgta
     7381 agttatttat aataaattcc tgtcgctcct ggctattctt acccatataa tattccagca
     7441 actgctgaat atgctcgccc tgctcgagga tcaccggctg aagccgcatg ttttccgtga
     7501 tgaacctttc aaattctccc ggagaaatct cgccaagtcc tttgaaccgg gtgatctctg
     7561 gctttccccc cagttttttt atcgcagcct gcttttcgct ttcatcataa caatagatcg
     7621 tttctttttt atcgcgcacc ctgaacaacg gagtctccag gatgtgcaca tggtcttttt
     7681 tcacgaggtc cggaaaaaac tgtaaaaaga atgtcattaa cagcaaacgg atgtgcattc
     7741 catcaacatc agcgtcagtc gcaataacga cattgttgta gcgcaatcct tcaagtccat
     7801 cttcaatatt caatgcatgc tgcaacaaat taaattcctc gttctcgtaa actatcttct
     7861 ttgttaatcc aaaacagttc agcggtttgc cgcgaaggct aaacaccgcc tgcgtttcta
     7921 cattccgtgc tttcgtgatc gaaccgctgg cactatctcc ttcagtgata aaaatagttg
     7981 atgcattctg cgacgcgata tattcctgtt tgccctttga aggcggatca tcattcagat
     8041 gcacatgaca atcacgcaat tttttgttat gcaggttggc tttttttgcg cgttcatttg
     8101 caagtttttt aatgcctgca agttcttttc tttcccgttc actttgttcg atccgtttct
     8161 ttaaagcctc tgcggtttgc ggattacggt gcagataatt atccagttcc ttcgacaaaa
     8221 aatcctgcac aaaattcttc atacttggtc cgccttcaga tatactctgc gaacccagtt
     8281 ttgtttttgt ctgactttcg aaaacaggtt cctgcacacg aaccgaaata gcggcaacaa
     8341 tgctctggcg gatgtctgca gcttcataat cttttttata aaaatcacgc actgctttta
     8401 cgtaggcttc ccgaaacgcc tgttggtggg tgccgccctg cgtggtatac tgaccgttga
     8461 caaaggaaaa aatgtcttca ccgtaatcac tgtgatgtga aatagcagct tctatatcct
     8521 cagctttcaa atgaattata ggatatctga gttc
//
LOCUS       DASQJI010000259         2762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_180487,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000259 DASQJI010000000
VERSION     DASQJI010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180487"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..1197)
                     /locus_tag="VEV83_07320"
     CDS             complement(166..1197)
                     /locus_tag="VEV83_07320"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK44960.1"
                     /translation="MKKNLRLAVLSTVVFIMKVNAQCDLKATILPVRPILCPNGTDTL
                     YTQEYDTYQWYKNKHLIPGATQRGYVITQDDVGYAFNVAVTKNGCADTSRRVVVDGYV
                     FLLPYVIETGDVGVYDPSRDALIECPDDTLILTLGDPYTLSIQWYDNYKAIKGANEQT
                     YYVTNSGSYTVCGAPEVCPQYNACETVPINVVFESPVATISEKNDTLFASKAKQYQWF
                     FNGKKIPGATERYYVPNAIGKYKVSTVDKYTCVAVSDPYLYATARVSKIISVAPNPVK
                     DILHLLIEAPGAIRLVLFDLYGNRVLQTAIKVGDNTISLQSMRPGTYIMQVLDKQNKM
                     ISSATIIKE"
     gene            complement(1312..1767)
                     /locus_tag="VEV83_07325"
     CDS             complement(1312..1767)
                     /locus_tag="VEV83_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HYK44961.1"
                     /translation="MPGAKEDLLVRSVAFSHDGHIPKKYSCDGDNINPPLEIANIHSS
                     TKSLALIMEDPDAPRGVFDHWIVWNIPPNAAIAENANPGLSGTNSFGDQGYGGPCPPS
                     GVHRYYFKLFALDSELDLPAGANKQQLQEAMKEHIIASGELMGRYSRNK"
     gene            1932..2588
                     /locus_tag="VEV83_07330"
     CDS             1932..2588
                     /locus_tag="VEV83_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44962.1"
                     /translation="MHLREISLQTKNITALSDFYASVLGLPVFEDSKRITVTAGSTTL
                     HFDATIDSKPFYHFAFNIPSEKIEEAARWLQGKVELLWIDEYQSEIAEFSTWNARSVY
                     FFDPAGNIVEFIARAELNDHPTEPFSAAQIRSVSEIGLVLPFEMFDQEVNDLMQRFQL
                     KYFSKQPPMKHFRAIGDDEGLFIVVPENRNWYPTNIAAGIFPLDVKFINEGKELELRL
                     "
BASE COUNT          760 a          589 c          604 g          809 t
ORIGIN      
        1 ccgttgctgg ttcttaatta tttcaaagaa ctgcattaaa ttttatttcg caaagagaag
       61 caagggtttg acttcaggct catcgatctt aaataagaac gcccaacaaa atcctaattc
      121 ctaaatccta attcctaaat cctaattccg aaatcccaaa tcttattact ctttaatgat
      181 cgtcgcagat gatatcatct tattttgttt gtctaaaacc tgcatgatat aagtgcccgg
      241 ccgcatcgac tgcagtgaga ttgtattatc gccgacttta atggctgttt gtaagacacg
      301 atttccgtag agatcaaaaa ggaccagtct aattgcgccg ggcgcttcga taagaaggtg
      361 taaaatatct ttcacggggt taggagccac ggaaattatc ttgcttactc tcgctgtggc
      421 atacagatac ggatccgaaa ctgctacaca agtgtatttg tcaactgtag aaactttgta
      481 tttaccgatt gcgttaggca catagtaacg ttctgttgcc cctgggattt ttttgccatt
      541 aaagaaccat tgatactgct ttgccttcga tgcaaacaaa gtgtcgttct tttcacttat
      601 cgtagcgacc gggctttcaa agaccacatt gataggaaca gtttcgcaag cattgtattg
      661 cggacaaact tccggcgcgc cacaaaccgt gtagctgcct gaatttgtaa cgtaataggt
      721 ttgttcattc gcacctttta tggctttata gttatcatac cattgaatac tcaaagtgta
      781 gggatctccc aaagtaagga tcagtgtgtc gtccgggcat tcaataagag catcccgcga
      841 cgggtcgtac acgccgacat cgccggtctc aattacgtaa ggcagaagaa atacataacc
      901 gtcaactacc acacgacggg aagtatcagc gcaaccattt tttgtgacag caacgttgaa
      961 agcataccca acatcgtctt gggtaataac atagccacgc tgtgttgcgc ctggtatcag
     1021 gtgcttgttt ttataccact ggtaagtatc atactcttgc gtgtaaagag tgtctgttcc
     1081 gttgggacac aaaatgggtc taaccggaag aatcgttgct ttaagatcac attgtgcgtt
     1141 tactttcatg ataaacacaa cagtggagag aacagcgaga cgtaaatttt ttttcataag
     1201 aaatgtttga cgtgtagctt aaacgaacgg aataaatgac gccaatttcg ctcagttggt
     1261 tgcatgcgtg tgaacttcga tgttttcaaa aagttgaggc gcttttcagc tctatttatt
     1321 tcttgaataa cgccccatta attcgcccga agcaataata tgttctttca tcgcttcctg
     1381 cagttgctgc ttgttggcgc ccgctggaag gtccagttca ctatcaagcg caaagagttt
     1441 gaagtaataa cgatgaacgc ccgacggcgg gcacggacct ccataaccct ggtcgccaaa
     1501 actgtttgtt cccgacagcc cggggttggc gttctctgca atagcggcgt tgggcggaat
     1561 gttccacacg atccaatgat caaaaacacc tcgcggtgcg tcgggatctt ccatgatcaa
     1621 agcgagtgat ttggtgctcg aatgaatgtt agctatttca agcggcggat ttatgttgtc
     1681 gccgtcgcac gagtattttt tcggaatgtg accatcatgg ctgaacgcaa cactgcgcac
     1741 cagcagatct tcttttgcgc ctggcataaa aggggtttga agaaaaacag caaaaattat
     1801 actcaaccgc atcattagat ttgtgaacaa atcgttcagc ttgcgatttt tttcattgat
     1861 gcggaaagtc gcatcgcgtc aacaatgcgc actgaaattt attaagtgca caaagctgtc
     1921 aaaagtttag catgcacctc agagaaatat cgctccaaac aaaaaacatt accgcattgt
     1981 ctgattttta tgcgtcggtt ttgggattgc ccgtgttcga agattcaaaa aggataacag
     2041 taaccgcggg aagcacaaca ttgcattttg atgcgacaat tgattccaag cctttttatc
     2101 attttgcatt caacatccct tcagaaaaga tcgaagaagc tgcgcgttgg ctgcaaggga
     2161 aagttgaatt gctctggata gacgaatatc aaagcgagat cgctgagttc agcacatgga
     2221 atgcgcgttc agtttatttt tttgatccgg caggaaatat cgtcgaattt atagccaggg
     2281 ctgaattgaa cgatcatcct acagagcctt tttctgccgc tcagatccga agtgtgagcg
     2341 aaataggatt ggttttgcct tttgaaatgt ttgatcagga agtaaacgac ctcatgcaaa
     2401 gatttcaatt gaagtatttt tcgaagcaac ctccaatgaa acatttccgg gcaattggcg
     2461 atgatgaagg attgtttatt gtggtgcctg aaaatcgcaa ctggtacccg acaaatattg
     2521 ccgctggaat ttttccattg gacgtaaagt tcataaacga agggaaagaa ttagagttgc
     2581 ggttgtagat ttcgattgaa atttacgacc tatctgttta acgatattcg tgattcattt
     2641 gcattcttat aaggtcgtcc cttcgggact ttacgtccat ctttttctga tttcagttac
     2701 ctaagggccg tcccttcggg actgcaaagg gcttcttagc tttctctttt catccgctga
     2761 ga
//
LOCUS       DASQJI010000260        10327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_795217,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000260 DASQJI010000000
VERSION     DASQJI010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10327
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795217"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VEV83_07335"
     CDS             <1..835
                     /locus_tag="VEV83_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK44963.1"
                     /translation="VSNNFHFDITGIFTSYHNKIVDIPASIYFDNDPPRDLIIQRNQE
                     GHSLGEFFGYKVIGLFQSEEDVEKSPDQDDAEPGVFKYADINGDGLINDEDRTFIGNP
                     HPDFTYGLNISFRFKNFDFSAFFFGSQGNDIFNLTRYFTDFPDYGGSGIRREVALNSW
                     TPENTNTSIPKMLVTGGFSTDRVSNSYFISDGSYFRCKQMQIGYTVPSSALSRFGIDK
                     LRIYAQAANLFTVTGYTGLDAELQTPPGVNGNINSKAYGVDQGNYPHKPTYLFGINLN
                     L"
     gene            1340..4579
                     /locus_tag="VEV83_07340"
     CDS             1340..4579
                     /locus_tag="VEV83_07340"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44964.1"
                     /translation="MRRSKKIILLFSVCLIAGFCIAQRHQNEIKPDQYRAIHWDVENG
                     LPPGGGNNVTTRDAMGFLWIGGTNTQLCRFDGTTFKKYFPGSQKRGSINAGSVYTFKE
                     DSLHNIWMGTDRGLSRYDIKADTFTNFSPVLRSAFPQLQMAPFWASADEMFCIEPGAL
                     VTAFNIHTLKRRRLVQLSREVDMSVQWNTNKSIFDTASKSIWKISYYQSQSALLEQIF
                     PDGKTKKYEWPRDERNFFHGHTAEDMQYDAARHSIWINTSDGLFEFSLTHNQFLQTSA
                     LREFTKQKDYERGVGIDIDHNGRIWFSTYLKGIFIYDPKTERVRPAFSDPELQKRTGK
                     ANLHIYCDAEGIIWTCNWEQQGIYELIPFCTVVKGYSANPREKNSLSSGLISTIIPGP
                     QGKVWMGTADGINIFDPVTETFDVLREKDLPGLKGTAIIPICIDTLKHKAWVNAGSQK
                     TPREYFNMSMYEMDLQTRRCKRIIFFDGPKQIDSFSVPPTLVRPYKGGIIFVDQRHGV
                     FEVQDGSLVANIIIPFTNRGGVGAIELAEDRYLFLQGGGELPNFTFQNKNGKWTKTPH
                     ILDSLSWFCMIYDQKDRTYWVSLKNELIHYDHAFREIKIYGNEYGYADAITSMQFDGT
                     GNLWFINSAKQLGRLNTVTGAITIFTETEGFHKQDYGWNPPLTRDVHGDLYAGNGWKL
                     DTVEPQWGLHRIYPGKYADVNNIRVYFRSLNINQKPFPLSSDINNVEELALHYDENTI
                     RIETGIINFYSTEKGKIRCRLEEKGKTAEWQHPMDNIIRYEGVSPGDYRLTVQASNAS
                     GEFIGPEKILMVTISPPFWQTWWFRITAVICTAALFYGVITWRLQQKFRLRLERSEKE
                     RQVAELQQQKTELEMQALRAQMNPHFIFNSLNSINRFILKKQGTEASEYLTKFSKLIR
                     MILNSSANVAVSLAEDLEALRLYLELESLRFENRFNYKVECHPDVDADFIQVPPMLLQ
                     PFVENAIWHGLMNKEGYGHLWINIDQQESTIICTITDDGIGRKKAAELKQTSVKHKSM
                     GMKITESRISIMQKENADGKSIEITDLVDAEGNPAGTEVVLKIPVIEQD"
     gene            4604..7840
                     /locus_tag="VEV83_07345"
     CDS             4604..7840
                     /locus_tag="VEV83_07345"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK44965.1"
                     /translation="MRVSKKISLLFLVCLIAGCSFAQERQNEIKPDQFRAVQWTIDDG
                     LPSNLANAMFKDAKGFLWIGSIHGELCRFDGSVFKKYFPDQQKRGLINSDIIFSFKED
                     SLHNIWIGTAKGLSRYDLRADTFTNFSPFIDSAFPDLTIAPFWATKDEVYCMEPGSLI
                     TAINVHTLKRRKLKILEADKFGIHWNTNKSSFDVKSNSIWTLAKYRQSGALEQIFLDH
                     RKNKYYSWPCYRNSVKHLHDAEDMRYDTKRNSIWINSGDGLLEFSLYDTKFHHIEALN
                     EFIKLKDYDRYVGIDIDKEGRIWLATKPGGILIYDPETQHIQQVFSDPGLQQKTGEYN
                     LHIYCDRDGIVWTSYFVDKGIYELLPFNPIFKRYTANPYKKDSLSSGLISTIVPGAKG
                     KLWIGTANGLNIFDPETERFEVLREKDLPGIKGIAIIPLYIDTITEKAWLNAGSQETD
                     RQYFSMNMYEMDTKTRRCKRIVFMDGPKQVDSLLIAPAWIRPYKNGIIFCEDNHGVFE
                     IKKGSLIANLLVSFKPGKYGFGGFVQEEDRHMFLGALYPPNFTFENKNGKWTKVPHLL
                     DSLFWLSMLYNKKDQTFWVSLKNELVHFDKEFRRIKTYGQEEGYNGPMLNMLLDNNGN
                     LWFVNSLKQVGRLNPANGIITTLSEIDDYHKQDYGEYPPATKDVRGNLYFGSGYHVEN
                     RELNYELDRIYPERYSSAPTSTVYLRSLDVNQNPFSSATGVNNLQELSLNYNQSTISI
                     ETGIIDYYAKGKGHIRYKLEENGKEKDWQYAPAYFTIRYEGLQPGSYRLVIQASNAGN
                     EFNSPLKILMIDIRPPFWQTWWFRITAVVCAAALFYGAIRWRVQQKFRSQLEQSEKER
                     QVAELQQQKTEVEMQALRAQMNPHFIFNSLNSINRFILQNNKVQASEYLTKFSRLVRM
                     ILQNSQESFITLENELESLQLYVSLEALRFDDHFDYRISVIDDLDTSIVKVPPLIIQP
                     YVENAIWHGLMHKEEKGQLNIDVWEENKFLYLKVSDNGIGRKQAALLASKSATKHKSM
                     GLEITAHRIAMIQNAEEGGSAVTFNDLVEPDGSAAGTEVTIKMPLMYD"
     gene            7833..8897
                     /locus_tag="VEV83_07350"
     CDS             7833..8897
                     /locus_tag="VEV83_07350"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK44966.1"
                     /translation="MIKAILIDDEGHCLDTLNILLTDYCPEVEVMELCASPKKGLDAI
                     EKLKPELVFLDIEMPGMNGFELLQQFKEVPFSVIFTTSYDQYAIKAIKFSALDYLLKP
                     IDPKELIAAVHKVQSQKATPGVEQLRALFEHVQGKDSGSRIAAVLHKNFPVRNQAVGP
                     LKQRHLAAILFTDIVAYTALMEQNEVHAIDAAKRYISVLEKTVAAHSGEVLNDYGDGN
                     LCIFSSATEAVHCALEIQLELQSEPAVPLRIGMHIGEILFQDGRVFGDGVNVASRIQS
                     LGQANTILFSEEIQDKIKNNPAFKSSSLGTFEFKNVDKPVKVFALANEGLKVPLRRQM
                     DGKLKKRSVYTDIFRIWKRS"
     gene            8929..9669
                     /locus_tag="VEV83_07355"
     CDS             8929..9669
                     /locus_tag="VEV83_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK44967.1"
                     /translation="MIKAILVDDELHCLDTLSMLLKDFCPEVQIVEKCRSGKAALEAI
                     EKLKPSLVFLDIEMPAMNGFELLEQFDEIPFSIIFTTSYDQYAIKAIRFSALDYLMKP
                     IDSKELIAAVHKVQVQQKLPSSEQFQMLLSQVNNKDAAFKKIAIPTLEGFELVPAEQI
                     LRCEADDNYTHFFLKNKQKIIASRTLKEVEEQLHEFSYFVRIHHSYLVNINEVTKYVR
                     GEGGYVVMSDGTAVNVSRSRKESLLKWF"
     gene            9972..10289
                     /locus_tag="VEV83_07360"
     CDS             9972..10289
                     /locus_tag="VEV83_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44968.1"
                     /translation="MKQHSINHEILLFLGTSFSRRQLCEINTGENMRSLAPARQLAMA
                     CWNGLLDEMLPEIMQIPSCSYMWDIQTEKTYLKIDRGVSLPVPKDDYSTDPHVFFCML
                     QMN"
BASE COUNT         3207 a         2036 c         2321 g         2763 t
ORIGIN      
        1 ggtaagcaat aatttccatt ttgacattac cggcattttc acgtcttatc ataacaaaat
       61 tgttgacata ccagctagta tttattttga taacgatccc ccacgggacc tgataataca
      121 acgaaaccag gaagggcatt cactgggcga attttttgga tacaaagtga tcggactttt
      181 tcaaagtgag gaggatgtcg aaaagtcccc tgaccaggat gacgcggaac ccggtgtatt
      241 taaatatgcg gatataaatg gtgatggcct gataaacgat gaggatagaa cctttattgg
      301 caatccccat cccgatttta cttatgggtt aaatatttca ttcaggttta aaaatttcga
      361 tttttctgca ttcttttttg gctcgcaggg aaacgatatt tttaacttga caaggtactt
      421 caccgatttc cctgactacg gcggcagtgg tattagaagg gaggtagcat tgaattcatg
      481 gacaccggaa aacacgaaca cttcgatccc aaaaatgctc gtaacaggtg gttttagtac
      541 agatcgcgtt agcaacagct atttcatcag cgacggctct tatttccggt gcaagcaaat
      601 gcagatcgga tacaccgtcc cttcgagtgc actttcaaga tttggaatag acaagctcag
      661 gatctatgcg caggcggcaa atttattcac ggtcacgggg tatactggtt tggatgctga
      721 gttacagact ccccctggtg ttaacgggaa cattaattcg aaggcttatg gcgtagacca
      781 ggggaattat ccacataagc ctacatattt atttggcatt aatctgaatt tgtaattgcc
      841 agattttatg gtttgctgta attggattaa ataggatgtc tggcgcatcg ctcacatctt
      901 cttcatccaa tttctaacat gcattcgtca gtagctaaga aatgttctgt atgttttatc
      961 tataattact cactaactgc agagagcgtg aagaatttgt tgtcgctatc atacaggctt
     1021 tggaaattaa aaagttatct tattgcaatc atatgtttct ttcctgcaat cagcaacacg
     1081 aggaagtgag cacagtatag catcttagaa gacggccggg gaaactttgg tgtacaaggt
     1141 aaatggtgta tgcgcatatg accgcgacga agcataaatc aatgggctta cgcgtcactg
     1201 ctgataggat tgcatgatgc aaagttcaaa tagatcacct gtaacgataa acgacttggt
     1261 gaatcgagat ggaacggaag tgaatattaa gataccagtg atggaacaag attaatctat
     1321 caaagcaagg attttaaaga tgaggcgttc aaaaaaaata atactcttat tctcagtttg
     1381 tctaattgca ggcttttgta ttgcgcaacg acatcaaaat gaaatcaaac ctgatcaata
     1441 ccgcgcaatt cattgggatg ttgagaacgg attgcctcct ggcggcggaa acaatgtaac
     1501 tactagagat gcaatggggt ttttgtggat cggaggaacg aatacccaac tctgccgctt
     1561 tgatggaacg acttttaaaa aatatttccc cggttcacaa aagcgaggtt cgataaatgc
     1621 gggatccgtc tatacattca aagaagacag cctgcataat atctggatgg gaaccgacag
     1681 agggttatca aggtatgata taaaggctga taccttcacc aatttttcgc ccgttcttcg
     1741 ttctgcgttt ccacaattac aaatggctcc tttctgggca tcggccgatg agatgttttg
     1801 cattgaaccc ggagcgctgg taacggcatt taatatacac acccttaaga ggagaaggct
     1861 cgtgcagtta tcgagagaag tggatatgtc tgttcaatgg aatacgaata aaagtatttt
     1921 cgacactgcg tcaaaaagta tatggaagat atcatactat caatcgcaaa gcgccctgct
     1981 cgaacagatt tttcccgatg gaaaaacaaa aaaatatgaa tggccgcgtg atgaacgtaa
     2041 tttttttcat ggtcatactg ccgaagacat gcagtatgat gctgccaggc attccatctg
     2101 gatcaatacg agtgacggcc tttttgaatt ttcattaacg cacaaccagt ttcttcaaac
     2161 ttcagcctta agggaattta caaaacaaaa agactacgaa cgtggcgtag gcattgatat
     2221 tgaccacaac ggaaggatat ggttttccac gtatcttaaa gggatattta tttatgatcc
     2281 taaaaccgaa cgggtaagac cggctttttc cgacccggag ctgcagaaaa gaaccggaaa
     2341 agccaacctc catatttatt gcgacgcgga gggtattata tggacgtgca attgggaaca
     2401 acaaggaatt tatgagttga ttcccttttg tacggttgtc aaaggatata gtgctaatcc
     2461 gcgtgaaaaa aattcattga gcagtggcct gatcagtacg atcattccgg gcccacaggg
     2521 taaggtatgg atgggtactg cggatggaat aaacattttc gacccggtta cagaaacatt
     2581 cgacgttttg cgggaaaaag acctgcctgg cttaaaggga actgcaatta taccgatctg
     2641 tatagatacc cttaaacaca aagcctgggt gaatgcaggc tcccaaaaaa ctccccggga
     2701 atattttaat atgagtatgt acgaaatgga tctgcagacc aggagatgca agcgcattat
     2761 cttctttgat ggaccaaaac aaatcgattc attcagcgtt cctcctaccc tggtgaggcc
     2821 atacaaaggg gggatcattt ttgttgatca aaggcatggc gtttttgaag ttcaagacgg
     2881 aagccttgtt gccaacatca taattccgtt cacaaataga ggtggggttg gggcaattga
     2941 attggcagaa gaccggtatt tatttttaca gggtggggga gagctgccca attttacttt
     3001 tcaaaataaa aatggaaaat ggacgaaaac gccccatatt ctcgatagtt tgagctggtt
     3061 ctgtatgatc tacgatcaaa aggatcgaac gtactgggtg agtttgaaaa atgaactgat
     3121 acattatgat catgcgttca gggaaattaa aatatacgga aatgaatacg gatacgcgga
     3181 cgcaatcacg agtatgcaat ttgatggtac cgggaacctg tggtttatca attccgcaaa
     3241 acagcttggc aggcttaaca cagttacagg cgcaatcact attttcactg agacagaggg
     3301 ttttcataaa caggactacg gatggaatcc gccactgaca agagatgtgc atggtgatct
     3361 gtatgcagga aacggatgga aattagacac cgttgaacca caatggggac tccatcgcat
     3421 atatcccggc aaatatgctg acgtaaacaa catccgcgtt tatttccgtt cactcaacat
     3481 taatcaaaag ccatttccgc tttcatcgga cataaacaac gtggaggaat tagccctgca
     3541 ctatgatgaa aatacgatca ggatcgaaac cggtattatt aatttttatt ccacagaaaa
     3601 gggcaaaata agatgcaggc tggaagagaa gggcaagaca gcggagtggc agcatccaat
     3661 ggataacatt attcgttatg agggcgtgtc ccccggtgat taccggttaa cggtgcaggc
     3721 atccaacgcc agcggtgaat tcattggccc ggaaaaaata ttgatggtta ccataagccc
     3781 tccattttgg caaacctggt ggttcaggat aacagcggtt atttgcacgg cggctctgtt
     3841 ctatggagtg ataacatggc gcctgcagca aaaatttcgc ttgcgattgg aacggtcgga
     3901 aaaagaaaga caagtagcag agctgcagca acaaaaaaca gagctcgaaa tgcaggcact
     3961 acgcgcacag atgaatccgc attttatttt taattcgctg aattcgatca atcgttttat
     4021 tctaaaaaag caaggcaccg aagcatcaga atatcttacg aagttttcaa agctgataag
     4081 aatgatcctc aacagttcgg caaatgtggc tgtgagttta gctgaggact tagaggcgtt
     4141 gagactatat cttgaactgg aaagtcttcg ttttgaaaac aggtttaatt ataaagtaga
     4201 atgtcacccc gacgtcgacg ccgactttat ccaggtacct cctatgttgc tccaaccttt
     4261 tgttgaaaac gcgatctggc atggattgat gaacaaggaa ggctatggcc acttatggat
     4321 caatatcgat caacaggaat caacaattat ttgcacgatc accgacgacg gcattggcag
     4381 aaagaaagca gcggaattga aacagacatc tgtcaaacat aaatccatgg gcatgaagat
     4441 cacggagagc aggatctcta tcatgcaaaa agagaatgct gatggcaaat caattgagat
     4501 aacagatctc gtggatgcgg agggaaatcc ggccgggacg gaggtcgtgt tgaagatacc
     4561 ggtaatagaa caagattaat ttatcagaga agggatttta aagatgaggg tttcaaaaaa
     4621 aatatcactc ttattcttag tttgtttaat tgcaggctgt tcttttgcgc aagaacgcca
     4681 aaatgaaatc aaaccagatc agtttcgtgc cgttcaatgg accatagatg atggattgcc
     4741 ttcaaacctg gcaaatgcaa tgttcaaaga tgcaaaggga ttcttatgga taggaagtat
     4801 tcacggagaa ctatgccgct tcgatggaag tgtttttaaa aaatactttc ctgaccagca
     4861 gaagcggggc cttataaatt ccgatattat tttttctttt aaagaggaca gcctgcataa
     4921 tatctggatc gggaccgcta aaggcttgtc gagatatgat ctcagggccg atacgtttac
     4981 aaatttttca cccttcattg attctgcgtt tcctgattta acgatagctc cgttttgggc
     5041 tacaaaggat gaagtctatt gcatggaacc aggctcattg attaccgcaa ttaacgtaca
     5101 cactcttaag aggagaaaac taaaaattct tgaggctgat aaatttggga tacattggaa
     5161 tacaaacaaa tcttcttttg atgtaaaatc aaacagtata tggacgttgg caaagtatcg
     5221 tcaatcaggg gcgctcgaac agatttttct tgatcacagg aaaaataaat attattcatg
     5281 gccttgctat cggaatagtg tcaaacatct ccatgatgct gaagacatgc gatatgacac
     5341 taaaagaaat tccatctgga tcaatagcgg cgatgggctc ctggaatttt cgctttatga
     5401 tacaaagttt catcacatag aggctttaaa tgaatttatc aaactgaaag attatgatcg
     5461 ctatgtgggt atagatatag acaaagaagg caggatttgg ctggctacta aacccggggg
     5521 gattctcatt tatgatccgg agacacaaca tatccagcaa gtattttcag atcctggatt
     5581 gcaacagaaa acaggtgaat ataacttgca tatttattgc gaccgggatg gaattgtatg
     5641 gacatcttat tttgttgata aaggaattta cgagttgctt ccatttaatc cgatttttaa
     5701 aagatatact gcaaacccat acaagaagga ttcattaagc agcggtctca tttccactat
     5761 tgttcccggt gccaagggta aattgtggat tggaacggcg aacggattaa acatttttga
     5821 tcctgaaaca gaaagatttg aagtgctgcg ggaaaaagat ctgccgggta tcaaaggcat
     5881 tgctataata cctctttata tagataccat aaccgaaaaa gcctggctca atgcagggtc
     5941 acaggaaaca gaccggcagt attttagcat gaatatgtac gaaatggata ctaagaccag
     6001 gagatgtaag cgtattgtct ttatggacgg cccaaaacaa gttgattcac tccttatcgc
     6061 acccgcctgg atcaggccgt ataaaaatgg aataattttt tgcgaggata atcacggcgt
     6121 ctttgaaatt aaaaagggca gtttaattgc aaacctgttg gtttctttca aacccggtaa
     6181 atatggcttt ggtggatttg tacaggaaga agatcgacat atgtttttgg gagctcttta
     6241 cccacccaat tttacttttg aaaacaaaaa tggaaaatgg accaaagtac cacatctgct
     6301 cgatagcctg ttttggttgt ccatgctcta taataaaaaa gaccaaacat tctgggtcag
     6361 cttaaaaaat gaattggtac actttgacaa agaatttcga agaattaaaa catatgggca
     6421 ggaagaagga tataacgggc cgatgttaaa catgctgctt gataataacg gaaatctttg
     6481 gtttgtcaat tctttaaaac aggtcggccg tcttaacccg gctaacggca ttatcaccac
     6541 tctttcagaa atagacgatt atcataaaca agactatggc gagtatccac cagcaacgaa
     6601 ggacgttagg ggcaatttat attttggaag tggttatcat gtagaaaaca gggaattgaa
     6661 ctatgaattg gatcgcatct accctgaaag atattcatcc gctcctactt ctactgttta
     6721 cctgcgttcg ctggacgtta atcaaaaccc attttcaagt gctacaggag tgaataacct
     6781 gcaagaatta tctctgaact ataatcagag taccatcagt attgaaactg gtattattga
     6841 ttattatgca aagggcaaag gccatataag atataaattg gaagaaaatg gcaaagaaaa
     6901 agactggcag tatgcccctg cgtactttac tatcaggtat gagggcttac agccaggctc
     6961 ataccggtta gtaatacagg cgtcaaacgc gggcaatgaa ttcaacagcc ctttaaaaat
     7021 attgatgatc gacatcaggc ctcctttctg gcaaacctgg tggtttagaa taacagcggt
     7081 tgtttgcgcg gcggcgctat tctatggagc gataagatgg cgcgtgcagc aaaaattccg
     7141 ttcgcaattg gaacaatcgg aaaaagaaag acaggtagca gaattgcagc aacaaaaaac
     7201 tgaagtggaa atgcaggcgc tccgcgcgca aatgaaccct cattttattt tcaattctct
     7261 taattcaatt aatcggttta ttcttcaaaa caacaaagtg caggcgtcag aatacctcac
     7321 aaaattttca aggttagtgc gtatgatctt acagaactcg caggagtctt tcattacact
     7381 cgaaaatgaa ttggagtctt tgcaactata tgtcagtctt gaggccctgc gcttcgacga
     7441 ccattttgat tacaggatat ccgttatcga cgatttagat acgtccattg taaaagtgcc
     7501 cccgctgatc atacaaccct atgtggaaaa tgcaatctgg catgggttga tgcataaaga
     7561 agaaaaaggc cagttgaaca ttgacgtctg ggaagaaaat aaattcttat atttaaaggt
     7621 cagtgataat ggcatcggcc gcaagcaagc tgcactactg gcaagtaaat cggccactaa
     7681 acataaatcg atgggattgg aaataacggc acacaggata gcaatgatcc aaaatgcaga
     7741 agagggagga tcagcggtta ctttcaacga cctcgtggag cctgacggca gtgcggcagg
     7801 caccgaagtc actattaaaa tgcctttgat gtatgattaa ggcaattctt atagacgatg
     7861 aaggacattg cttagatacg ctgaatatcc tgttgacgga ttattgcccg gaggttgagg
     7921 tgatggaact ttgtgcgtct ccgaaaaaag gcttggacgc aatcgagaaa ttgaaacccg
     7981 agctggtctt cctcgatatc gaaatgcccg gtatgaatgg atttgaattg ttgcaacaat
     8041 ttaaagaagt tccgttctct gttattttta ctacgagtta tgatcaatat gcgatcaagg
     8101 caataaaatt tagtgcgctg gattatttat tgaaacctat tgatcccaaa gagctgatcg
     8161 ctgccgttca caaagtacag tcgcagaaag caacgcccgg tgttgaacaa ctgcgcgccc
     8221 ttttcgagca cgtgcagggt aaagacagtg gttcgaggat cgcagccgta ctgcacaaaa
     8281 attttcccgt gcgtaaccag gccgttggcc ctttaaagca acgccacctg gcggccatac
     8341 tttttactga tatcgttgca tatactgccc tgatggaaca gaacgaggtg cacgcaattg
     8401 atgcggccaa acgatacatt tctgttcttg aaaaaaccgt ggctgctcat tccggagaag
     8461 tgttgaatga ttatggagat ggaaaccttt gcatcttttc aagtgctacg gaagcggtgc
     8521 attgtgcttt ggaaattcaa ctcgaattac aaagcgaacc ggctgtacct cttcgcatcg
     8581 ggatgcatat aggcgagatc ttattccagg atggaagagt atttggtgat ggagttaatg
     8641 tagcgtcccg cattcagtcg ctgggccagg caaacacgat ccttttttcc gaagagatcc
     8701 aggataagat caagaataac cctgcattta agtcttcgtc gttgggtacg tttgaattta
     8761 agaacgttga caaacccgtt aaagtatttg ccctggctaa tgaaggtttg aaggtgcctt
     8821 tacgaagaca aatggacggg aaattaaaaa agagatccgt atacaccgat attttcagaa
     8881 tatggaagag aagctgaaaa aaccatcgga agttaaagcc tgtgatgtat gataaaagca
     8941 attttggtgg atgacgagct tcactgcctt gatacgctga gcatgttgtt gaaagatttc
     9001 tgcccggaag tacagatcgt tgaaaaatgc cggtcaggaa aggcagccct tgaagccatt
     9061 gaaaaattaa agccgtcgct cgtgttcctc gatatcgaga tgcccgcgat gaacggtttt
     9121 gagctgctcg agcagtttga tgaaattccc ttctccataa ttttcaccac gagctacgac
     9181 caatatgcga tcaaggcgat tcgttttagt gcgttggatt acctgatgaa gcccatcgat
     9241 tcaaaagagc tgattgctgc ggtgcataaa gtacaggtgc agcaaaaact gccatcaagt
     9301 gaacagtttc aaatgctgct tagccaggtg aataataagg acgcagcttt taaaaaaatt
     9361 gcaataccta cgctcgaggg attcgaattg gtaccggcgg aacaaattct tcgctgcgaa
     9421 gccgacgata actatacaca cttcttcctt aaaaataaac agaagatcat tgcaagccgc
     9481 acgcttaagg aagtggaaga acaactgcac gaattttcat acttcgtcag gatccatcat
     9541 tcctatctcg tcaacataaa cgaagtcaca aagtacgttc gcggtgaagg cggctatgtt
     9601 gtgatgagcg atggcaccgc cgttaatgta tcccgcagcc gaaaggaatc gttgttgaaa
     9661 tggttctgag gatttacgat ttagcattta ggatcattca ctttttcacc atattatttt
     9721 aggaattagg atttggattt acggtgctca gaactcacaa ctgccaactc cccactccca
     9781 aacggcaact gattactcat cactcatcat tcatcactca tccctcatta ttcatacact
     9841 cactcttccc ttcgatacaa ctgctttctc tttccgccaa ctgctcggcg gcgctggttt
     9901 caggcatgat atgaaaatag ctttgggtca gataaagaaa aaagcatttt caaatcaaaa
     9961 aaataattgc catgaaacag cattcaatca atcacgaaat tctcctgttc ctcggcacaa
    10021 gtttttccag gcgccaatta tgcgaaataa ataccgggga gaatatgcgc agccttgcac
    10081 cggcgcgaca attggcaatg gcctgctgga acggcctgct cgatgagatg ttgccggaga
    10141 tcatgcaaat accatcttgc agctacatgt gggacattca aacagaaaaa acttatttga
    10201 aaatcgacag gggtgttagc ctaccggttc caaaagacga ctattccaca gatccgcatg
    10261 tgtttttttg catgctccaa atgaattaag cgcgaacaga gaatcaattt taaaataaat
    10321 ttttaat
//
LOCUS       DASQJI010000261         3850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_26938,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000261 DASQJI010000000
VERSION     DASQJI010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26938"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VEV83_07365"
     CDS             complement(<1..254)
                     /locus_tag="VEV83_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44969.1"
                     /translation="MTITIRAVAAGDVRAIMVLADQLGYSMSEPQMLEHIQAVIGHAD
                     CDAFVAVDENEVVGWIGLAHRIQLESAPFCEINGLVVDER"
     gene            complement(472..738)
                     /locus_tag="VEV83_07370"
     CDS             complement(472..738)
                     /locus_tag="VEV83_07370"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HYK44970.1"
                     /translation="MILHLRVKPNSKVDSLEVKGDGTIAVKICAPAVEGKANKYLVRY
                     LSDLFKIRPSKINIIKGQNNPHKTISIEADEKYVKEILSALRKA"
     gene            complement(780..1388)
                     /locus_tag="VEV83_07375"
     CDS             complement(780..1388)
                     /locus_tag="VEV83_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44971.1"
                     /translation="MRFLPTVLLITFSSAQLNAQKIDSPYVAPYFLPTPNGYTTEVIP
                     FPIEFAPSINYNGVEDLRFTAGWGNAATEDYWSYAFLWWLDGSPGINEDTVTNNLKTY
                     YSGLVGRNIKPRNIPENKIVPVQVKVTSATLTAGDVQTFEGAVYMLDYMQQEPITLHV
                     RVHVRTCGDNKTVVFNEISPQPYTSPTWEKLDDIWNGFRCSK"
     gene            complement(1453..2982)
                     /locus_tag="VEV83_07380"
     CDS             complement(1453..2982)
                     /locus_tag="VEV83_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44972.1"
                     /translation="MIRSKTLWLLILSTCLVAGSYAQDTKWLLGTWNAPVSKAGKFHM
                     ARSILIDSVYGENFSGTSSSEADDDNHTKIVTAIKGHFNENQFMMRIGEVLYRKDPPH
                     NVWVNCTTCPLYNKIIIKHDTVFLNSEISGCSKFCDGISVYYKLLPDYDTTTQRQLVD
                     LFADSAYAANFKPLEKVAMQQQKAIDDSLKIVAALALKRQQQVDDSLKNVAAIAALRK
                     QRADDSLKAVAMIAAKRQQQVADSLKNAAIIASKQHEQQVKDSIRTATAVEKQRQQHV
                     NDSMKNVALLAAARQKHVNDSLRNATMLAKQRQKQADDSLKAVAALAAKRQKQIDDSL
                     ANAAIIAKKRQQQIDDSLKNAVLVAQQQQQHIDDSLQRVAAAAAKNPNNPAAIMPASK
                     ALEQRQNVLVQSFHITTPDILIELFDNAQIDGDMVSVYHNNELIVDKQKLLRDAITMH
                     IHADSLHREHEFILIADNLGTIPPNTALMRITAGKQHYQLNVKTDLSNNAKIILYYDG
                     N"
     gene            3174..3824
                     /locus_tag="VEV83_07385"
     CDS             3174..3824
                     /locus_tag="VEV83_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44973.1"
                     /translation="MRIRLLLVFAVCAAHSAFTQPAVRDEPRHHNVFENDHVRVLDVY
                     LPPGDTTQYHVHATPSVFITFTRTVTTSQLMGQTAATSTSVAGMPWYDSLVTPRIHRV
                     WNDDTSWFHVMDVELTGGSAHTNPPAVENVSLQLLFDEPLVRVYKAQLAAGNNINFPL
                     SKAGYLVISTGNASLTFQTGGIIQQRLMKAGHYCWLNEASTVTSNTSANLLILQLK"
BASE COUNT          931 a          881 c          877 g         1161 t
ORIGIN      
        1 tatctttcgt caaccaccag gccgttgatc tcgcagaatg gagccgattc aagttgaatt
       61 cgatgcgcca gcccgatcca tccaaccacc tcattttcgt ctactgccac aaacgcatcg
      121 caatccgcgt gcccgatcac agcttgtatg tgttcgagca tctgcggctc tgacattgag
      181 taaccgagtt gatcggccag caccataatt gcccgcacgt ctccggctgc aactgctctt
      241 atcgtaattg tcatgacttg attgcaaaat aaaattacaa agtgtatcgc tcttgatgtt
      301 cctgttaaga cttgaagtaa aactattaaa agctgcgatg tataaatctc gcgaggacca
      361 gaaaaaattt gcaacaatgt gagtcgttcc gaagctttcg cgcggcattg agcgattgct
      421 aaccgcgcca acggttttac ggcgaaacgt ttttgaaacc tggcgcgtcc tttaagcttt
      481 tcttagtgca gacaatattt ctttcacgta cttctcatca gcttcaatgg atattgtttt
      541 gtgtggattg ttttgtcctt taatgatatt aatttttgat ggtcgaattt tgaaaaggtc
      601 agagaggtag cgtaccaaat atttattcgc cttgccttcc acggctggtg cgcaaatttt
      661 caccgcgatc gtaccatctc cctttacttc cagcgaatca acttttgaat tcggtttaac
      721 acgcaagtgt aagatcatcg ttacttaacc ttgtagcgtt gaattgcgcc gtattatttt
      781 tacttactgc atctaaagcc attccagatg tcatccagct tttcccaggt tggggatgta
      841 taaggctgcg gtgagatctc gttaaacacg accgttttgt tatcgccgca tgttcttaca
      901 tgtacacgaa cgtgcagcgt gatcggctcc tgctgcatat aatcgagcat gtatacagca
      961 ccttcaaaag tttgcacatc gcctgcggtc agggtggcgg atgtcacctt aacctggacc
     1021 ggaactatct tattttccgg gatatttctc ggttttatat ttcttccaac caacccggag
     1081 tagtacgtct ttagattgtt agtaacagtg tcttcgttta tcccgggcga accatcgagc
     1141 caccacaaaa atgcataaga ccagtaatct tcggttgccg catttcccca tcctgctgta
     1201 aacctgaggt cttcaacccc attgtagttt atcgacggag cgaattcaat agggaacgga
     1261 attacttccg tcgtgtatcc gttcggcgtc ggcaaaaaat aaggagccac atacgggctg
     1321 tcgatctttt gcgcattaag ctgcgccgaa gaaaaggtga taagcaaaac ggttggcaga
     1381 aatctcatat tgtaaagttt ggaccagcaa tacgacatga aattgtttgc atcagtgtcg
     1441 gcggaggtca gcttaattgc catcatagta taaaattatt tttgcattat tcgaaaggtc
     1501 ggtctttaca tttagttgat agtgttgttt gcccgccgtg atgcgcataa gagctgtgtt
     1561 gggaggtatc gttcccaaat tatccgcgat gaggatgaat tcatgctcgc ggtgcagtga
     1621 atcggcgtgg atgtgcattg tgatcgcgtc cctcagcaat ttttgtttgt caacgatcag
     1681 ctcattgttg tgatatacgc tcaccatgtc gccatctatc tgcgcattgt cgaataattc
     1741 aataaggata tcgggcgttg tgatgtgaaa tgattgtacc aggacgttct gccgttgctc
     1801 cagtgctttg cttgcgggca tgatcgctgc cgggttgttc gggtttttcg cagcggctgc
     1861 cgcgactctt tgcaaagaat catcaatgtg ttgctgctgt tgttgcgcaa caagtactgc
     1921 atttttcagt gagtcgtcaa tttgttgttg tcgtttcttt gcaatgatag ctgcatttgc
     1981 cagtgaatca tcgatctgtt tttgccgttt tgctgctaat gccgcaacgg ccttcaaaga
     2041 atcgtcagcc tgcttttgcc gttgttttgc aagcatcgtc gcgtttctca acgagtcgtt
     2101 gacgtgcttt tgacgcgcgg cggcgagtaa tgccacattc ttcatcgaat cattaacgtg
     2161 ctgctgtcgt tgcttctcaa cagccgtcgc cgttcttatc gaatctttta cctgttgctc
     2221 gtgttgtttg cttgcgatga ttgcggcatt cttaagtgaa tcggcgactt gctgttggcg
     2281 tttagcggca atcatggcga cagctttaag cgaatcatct gcccgctgtt tacgcaaggc
     2341 agctattgcg gcaacgttct tcagcgagtc atctacctgc tgctggcgtt ttaatgcaag
     2401 agccgcaacg atctttaaag aatcatcgat tgccttctgt tgttgcatcg caactttctc
     2461 aagcggctta aagtttgcgg catacgcaga atcggcgaac aaatccacga gttgtcgttg
     2521 cgttgtggtg tcgtaatcgg gcaagagctt gtagtaaact gatatgccgt cacaaaactt
     2581 gctgcaaccg ctgatttcgg aattcaaaaa gaccgtgtca tgtttaatga ttattttgtt
     2641 gtataaagga caagtggtgc agtttaccca tacattgtgc ggaggatctt ttctatataa
     2701 aacttccccg attctcatca tgaactggtt ttcattaaag tgccccttaa tggcagttac
     2761 aattttcgtg tgattgtcgt catcagcttc gctgctgctt gttccggaaa aattctctcc
     2821 atatactgag tcgatcaaaa tacttcttgc catgtgaaat ttgccggctt tgcttacagg
     2881 ggcattccac gtcccaagca accatttcgt gtcctgcgca taggatccgg cgacgaggca
     2941 agttgaaagg attagcaacc acagtgtctt ggatcggatc ataaatcagt tgatgtaagc
     3001 cgcggatcaa aattgtacac cggaaaataa agcaattgca ttttggatgc ttttatttgt
     3061 tcgaaagata aaacaatctt acagttcgcg ataaagcatt ttcaaaatat ttgctaatac
     3121 tgtttacagt tgttattgag agatatcaga tatttaccta acgactgaaa attatgagaa
     3181 tacggttatt acttgttttt gctgtttgcg cagcacactc agcttttact cagcctgccg
     3241 tgagagatga gccgcggcat cacaatgttt ttgagaatga tcatgtgcgc gtactcgatg
     3301 tatacctgcc tccgggagac accacgcaat atcatgttca tgctacgcca tccgttttta
     3361 tcactttcac gaggaccgtg acaacttcgc agcttatggg gcaaacggcg gccacaagta
     3421 catccgttgc cggcatgccg tggtacgata gccttgttac gccgcgcatt catcgtgtgt
     3481 ggaatgatga cacgtcgtgg tttcatgtga tggatgtgga actaaccggt ggcagcgcac
     3541 acacaaaccc acccgcggta gaaaacgttt ctttacagtt gttattcgac gagccgcttg
     3601 ttcgtgttta caaagcacaa ctcgcagccg gcaacaacat taatttccct ttatcaaaag
     3661 ccggatatct tgtcatcagc accggtaatg cgtcgctgac gtttcaaacg ggcggcatta
     3721 tccagcagcg actgatgaag gcggggcatt attgctggct gaacgaagca tcaactgtca
     3781 ccagtaatac ttctgcaaac ctgctgatct tacaattgaa ataatttttt ggaatgacgt
     3841 gccgaaaagc
//
LOCUS       DASQJI010000262         4112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1410129,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000262 DASQJI010000000
VERSION     DASQJI010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410129"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..1278
                     /gene="tuf"
                     /locus_tag="VEV83_07390"
     CDS             91..1278
                     /gene="tuf"
                     /locus_tag="VEV83_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HYK44974.1"
                     /translation="MSKETFKRDKPHVNVGTIGHIDHGKTTLTAAITSILAKRGMATE
                     KKYDEIDAAPEEKERGITINTAHVEYQTKNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTKEHILLARQVGVPRMVVFMNKVDLVDDPELLELVEMEIRELLTF
                     YGFDGDNTPIIQGSATGALAGEEKWVKAVDDLMDAVDSYIPLPPRPIDQPFLMSVEDV
                     FSITGRGTVATGRIERGIIKVSDPVEIVGLIDAPLNSVVTGVEMFKKLLDRGEAGDNA
                     GLLLRGIEKKDIRRGMVICHPKSITPHTEFKCEVYVLSKEEGGRHTPFFNKYRPQFYF
                     RTTDVTGEVVLPEGTEMVMPGDNVSLTVKLIQPIAMEKGLKFAIREGGRTVGAGQVTE
                     ILK"
     gene            1377..1447
                     /locus_tag="VEV83_07395"
     tRNA            1377..1447
                     /locus_tag="VEV83_07395"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1409..1411,aa:Trp,seq:cca)
     gene            1560..1754
                     /gene="secE"
                     /locus_tag="VEV83_07400"
     CDS             1560..1754
                     /gene="secE"
                     /locus_tag="VEV83_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HYK44975.1"
                     /translation="MNKVSNYVRDSYRELMEKVTWPSWAQLQQSTVIVLSATLLIMTI
                     VYLMDLASTELLKLIYSFFS"
     gene            1773..2369
                     /gene="nusG"
                     /locus_tag="VEV83_07405"
     CDS             1773..2369
                     /gene="nusG"
                     /locus_tag="VEV83_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HYK44976.1"
                     /translation="MEETIQENPVQQQETKWYVLRVVSGKERKVKEYLDKDIARSGYS
                     DVIKQVFLPMEKVYKVQNGKKVMREKNYFPGYVMLEVLDGKLTDDMIHHISNVSNVMH
                     FLTDGKGSKGNIISLRKTEVNKMLGKVDEMSDAGGMTMSEPFIIGETIKIIDGAFNDF
                     NGVIEEVNDEKKKLKVIVKIFGRSTPVELNYMQVEKLS"
     gene            2366..>4112
                     /locus_tag="VEV83_07410"
     CDS             2366..>4112
                     /locus_tag="VEV83_07410"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK44977.1"
                     /translation="MTSKIIYRKISLLNRGLIFLRISTQCLPKIVAGLKTYIWSYDYR
                     IMNHSWFHNHNIFVKAFIKIFFLSICFLGNVSGQEDVSLSSLRFDHLNFSNGLSFNVV
                     NSIIKDKKGFIWISTQDGLNRYDGVNFKVYRHDAHNPNSLASSGVYQMTLDSKGNIWM
                     ATDAALTEYVPATDSFKNFFVATRSKSRSTQSPYVDSDDVVWFGDNDGLCRLNSDGEI
                     ETFPIKHLLRRFSIGSIIEDDEGIIWVGTIQGLYSFNKQTHIFKRYSFKTGSEEANSI
                     TCLIQDHEKDIWVGSWGNGIAKFDRRTGKFEVYKYSVDENIVWSIYESSEQEGKLWIG
                     TAYQGIAIFDKEKKSFEFASINPNDVNAFNAYGVNQIFNDHLGTLWFAGTNGVVKLDK
                     YKQQFRRQIVEPIRTSTGKGITGIIADTLHAQKLLWVSTYRHGIIAYSQQTGKFTVFG
                     PHPGNAISNQLVNSMVQDHDGKFWIATSNGFNRFDPETKIFSVFKNIPGKNSLPVNDI
                     NHLMLSKEGKVWMTVRGNGFCSFDPQTQHFNWYRKISDQNNDSINNSVFCLTEDHNGV
                     IWGGTQFGGMFSFNPK"
BASE COUNT         1278 a          767 c          955 g         1112 t
ORIGIN      
        1 aaattctgtc gctgggtaca gaaaaatata aatgctaaag gctgaaagct gatagctcaa
       61 ttttaaaacc acaatacaaa aacgataaaa atgtctaaag agacttttaa gagggacaaa
      121 ccccacgtaa acgttggtac cataggacat attgaccatg gaaagacaac attgacagca
      181 gctatcacaa gcattttggc aaagagaggc atggcaacgg aaaaaaaata tgatgagatt
      241 gatgccgctc ccgaagaaaa ggaacgtggt attaccatca ataccgctca cgtagagtat
      301 caaacaaaaa accgccacta tgctcacgtg gattgtccag gtcatgctga ttatgtaaaa
      361 aacatgatca ctggcgctgc gcagatggat ggcgcgatcc tcgttgtggc tgcaaccgac
      421 ggtcccatgc cgcagacaaa agaacacatt cttttggctc gccaggtggg tgttccgcgt
      481 atggtggtat tcatgaacaa ggttgatctc gtggacgatc ctgaattgct ggaactggta
      541 gaaatggaaa ttcgcgaact tctgaccttc tacggttttg atggcgataa tactccgatc
      601 atccagggtt ctgctaccgg agctttggcc ggagaagaaa aatgggttaa agcagtagac
      661 gatctgatgg atgcagttga cagctatatc ccgctgcctc cacgcccaat tgatcagccg
      721 ttcctgatga gcgttgaaga cgtgttctcg attactggtc gtggcactgt tgcaacaggc
      781 cgtatcgaac gcggtataat taaagtgagc gatcccgttg aaattgtagg attgatcgat
      841 gcaccgttaa actcggttgt aacaggcgtg gaaatgttca agaaattatt ggatcgtggt
      901 gaagccggtg ataatgcagg tttgttgctt cgcggtattg aaaagaaaga tatccgtcgt
      961 ggaatggtta tctgtcatcc gaaaagtatt acgccgcata ctgaattcaa atgcgaagtg
     1021 tacgtgttga gcaaagaaga aggcggacgc catactcctt tcttcaacaa ataccgcccg
     1081 cagttctact tccgtactac agatgtaaca ggcgaagtag tattgcctga aggaactgaa
     1141 atggtgatgc cgggtgataa tgtaagcttg accgttaagc ttatccagcc gatcgctatg
     1201 gaaaaagggt tgaaattcgc tattcgtgag ggtggtcgca cggtgggcgc cggacaggtt
     1261 actgagatct tgaaataagc cggggcgaaa gcgtgagttt tttcgcaaag gattttttac
     1321 atttgcaaca tattctaaaa gctgtttcgc cttgcggaat agcttttagc tttcttacgg
     1381 gtatagttca atggtagaac agcggtctcc aaaaccgtcg atctgggttc gaatcctagt
     1441 acccgtgctc gctaatttga aatgagtaat tggagaattt gaaaatggtt tttacttttc
     1501 agatttgttc aaatgcaatt ttcaaatttt cacatgttca aattttcaaa ttttattgaa
     1561 tgaataaagt atcaaattat gtccgtgatt cttacaggga attaatggaa aaggttacct
     1621 ggccaagctg ggcccagtta caacaatcaa cggtgatcgt actatcagcc acgttgctga
     1681 taatgaccat agtataccta atggatttgg ccagcactga attgctgaaa ctaatttatt
     1741 cttttttcag ctaaaattta aaggaaaaca acatggaaga gacaatccag gaaaacccgg
     1801 tgcagcagca ggaaacgaag tggtatgtac ttagggttgt gagcgggaag gaaagaaaag
     1861 taaaagagta ccttgacaaa gacattgcac gcagcggcta cagcgacgtg atcaagcagg
     1921 tgtttttgcc aatggaaaaa gtgtataagg tgcagaacgg taaaaaagtg atgcgtgaaa
     1981 aaaactactt cccgggttac gtgatgctcg aggtattaga cggtaaactt actgacgata
     2041 tgatccatca catcagcaac gtgagcaacg tgatgcactt cctcactgat ggaaaaggtt
     2101 cgaagggcaa tattatttct ctccgaaaaa cagaagtgaa taaaatgctt ggcaaggtcg
     2161 acgagatgag cgacgcaggt ggcatgacga tgagcgagcc attcatcatt ggtgaaacga
     2221 tcaaaataat tgacggcgca tttaatgatt tcaacggtgt gatcgaggaa gtaaatgatg
     2281 aaaagaaaaa gcttaaggtc attgtgaaga tcttcggacg ttcaacacca gttgaattga
     2341 attatatgca ggtcgaaaaa ctgagttgac ttctaaaata atttacagaa aaataagcct
     2401 gcttaatcgc gggcttattt ttttgcgcat atcgacacag tgcttaccca agatcgttgc
     2461 cggtttaaaa acttatattt ggtcatatga ctaccgcatc atgaaccatt cctggttcca
     2521 taatcataat attttcgtaa aagcttttat caaaattttc tttttatcga tttgcttttt
     2581 ggggaatgtg tcaggtcagg aagatgtctc actttccagt cttcggttcg atcatctcaa
     2641 cttcagcaat ggtttatctt ttaacgttgt taattcaatc attaaggata aaaaaggatt
     2701 tatctggatc tcaacgcagg atggattgaa taggtatgac ggcgtcaact tcaaagttta
     2761 ccggcatgat gcccataatc caaattcgct ggccagcagt ggcgtttatc aaatgactct
     2821 tgatagcaag ggtaatatat ggatggctac tgatgcagca ctaactgaat atgttcctgc
     2881 tacggatagt ttcaaaaatt tttttgttgc caccaggtca aaaagccgct ctacgcaatc
     2941 gccttatgtt gattcggacg atgttgtttg gtttggggac aatgatggat tatgtcgctt
     3001 gaattcagac ggagaaattg aaacgtttcc aattaaacat cttcttagaa gattttctat
     3061 cggctcaatc attgaagatg acgaaggaat catttgggtt ggaacaatcc agggattgta
     3121 tagcttcaat aagcaaacgc atattttcaa aagatattct tttaagacag gaagcgaaga
     3181 ggcaaattcc ataacgtgcc ttatccagga tcatgaaaaa gatatttggg taggatcgtg
     3241 gggtaacggc attgcaaaat ttgaccgccg gaccggaaaa ttcgaggtat ataaatatag
     3301 tgttgatgag aacattgtct ggagtatata tgaatcatcc gaacaagaag gaaaactgtg
     3361 gatcggaaca gcctaccagg gcattgctat ttttgataag gagaaaaaat cttttgagtt
     3421 cgcttctata aacccaaacg atgttaacgc tttcaatgct tatggcgtga accaaatttt
     3481 taacgatcac ctcggaacct tatggtttgc aggcaccaat ggggtagtaa agcttgacaa
     3541 atacaaacag cagttccgaa gacaaattgt tgaacctatt agaacatcaa ccggcaaagg
     3601 aatcacagga attattgccg atacacttca tgcgcagaaa ctattgtggg tgtcaactta
     3661 ccggcatggg ataattgcat actcgcagca aacaggcaaa ttcacggtat ttggtccgca
     3721 ccccggtaat gcgatcagca accagctggt gaattcaatg gtacaggatc atgatggaaa
     3781 attctggatt gcaacttcaa atggcttcaa cagatttgac ccggaaacaa aaatctttag
     3841 cgtttttaag aacattcccg gcaaaaattc tttgcccgtg aatgatatca atcatttaat
     3901 gctgtcgaag gagggcaaag tgtggatgac agtgcggggg aatggctttt gttctttcga
     3961 tccgcagacg caacatttta actggtacag gaaaatatca gatcagaata atgacagtat
     4021 caataactcc gtattttgtt tgaccgaaga ccataatggt gttatctggg gcggaacaca
     4081 attcggcggt atgttcagtt tcaatccaaa aa
//
LOCUS       DASQJI010000263         4464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_334812,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000263 DASQJI010000000
VERSION     DASQJI010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334812"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VEV83_07415"
     CDS             complement(<1..385)
                     /locus_tag="VEV83_07415"
                     /inference="COORDINATES: protein motif:HMM:NF019559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase family protein"
                     /protein_id="HYK44978.1"
                     /translation="MKRISFLLIILYVAAFVFDSVLGKLGTAPTRYFTKGLLMPLLLA
                     FFLIEVNDGLHDRALPFVRLICVALIFSFIGDLFLVDSEGTYNFAFGLASFLVVQVCY
                     ILFFYRTKSFAKKNASFLFVATLLIL"
     gene            complement(392..1240)
                     /locus_tag="VEV83_07420"
     CDS             complement(392..1240)
                     /locus_tag="VEV83_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44979.1"
                     /translation="MNRYDAYITEYLIANKEVDLEKIGSLKLTTDHPDSAEAGSVSFV
                     YDRKIATSPGLIDFITERSGKLRSLIESDLESHFTQVREFLNIGKPFEVLNAGLIKCN
                     VRQEYEFMPYPHSGKAQKSRSQPSKPTTRRRAGSGVQVLTFLIVLAIIGGLGWQAYVY
                     YMKPKPASVPTAETDSTSTDSSASIATPDSVATTNATYGPNDSVDARFIFETTDLRLR
                     AKTRTAQLISFGNKAAYDSFMNGNKRFYSLFIYKKTRIADTLAVKDSIQKFLQRNIRV
                     EIPPKQ"
     gene            1283..1726
                     /locus_tag="VEV83_07425"
     CDS             1283..1726
                     /locus_tag="VEV83_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44980.1"
                     /translation="MWLKRGYKKFTVLNLRTQYKLLQYVSLIIVDVWIDPMLTKQEEA
                     FLNYWEQNREREKSVVRQFFPGLPIGFAIAAAILLVLDSGWYERANIVAQSESSPVII
                     FIGVLAIVAFTGFFYKKYRWEMNEQTYQELKLKGRKDKQGTEANE"
     gene            1737..2204
                     /locus_tag="VEV83_07430"
     CDS             1737..2204
                     /locus_tag="VEV83_07430"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HYK44981.1"
                     /translation="MKTLLLFSATVLFLITCKKNDSGCMSVPPADEAGAMAAFCVDYG
                     IDYTVDSNGIYYEIVDPGSGATASLDSLITVTYTTSLLNGDLIEDHSDSAITLPLSKF
                     IEGWRIAIPYIHEGGHIKMVIPSALAYGCSGSAGMVPPDSPIYNDVVLIKVSH"
     gene            2309..>4464
                     /gene="secD"
                     /locus_tag="VEV83_07435"
     CDS             2309..>4464
                     /gene="secD"
                     /locus_tag="VEV83_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HYK44982.1"
                     /translation="MQLKGLVRFFAIALILICLYQLSFTWIVHSYESSMREKAELYVK
                     ATHPSPETKYPNNKQLQQMYRDTVEALEKQRLQRLLDSTKDSKIGPFGMTTYRSAKDK
                     ELMLGLDLQGGMSVTMEVGLDGLIKSLANYTKDPVFNKALSAAVQKKATSGADLITLF
                     GAEFRNASAGAKLAPYFISRSNGRIKFDASDDAVLNYLREQASSAFENTERILRTRID
                     RFGVASPNINPDPKKGIINIELAGVNDPERVRKYLQSTANLQFFEVYNIADLNDNINA
                     AQKALSDYLKGSSALAQTDTTKTGTADTLKTVAADTSKIDTGATVNKTVDTNAIGGFD
                     NVKNPAVKAPGTAGNTNAKEDSNAIKRKELPLQSVIQFIGPQQDQQGKTYYSANLGYV
                     STNDTGLLNSYLNMDLVKNKFPANLVFMYGKPENAEIASRNLLALYAIKTLDNGQAKL
                     EGQHVTVARQDYDERGAPAISMQMDGEGTRIWAKMTADNKSKPIAIVLDNVVYSAPNV
                     LNAITGGNSQITGNFTVEAAQDLANILQSGKLPAPARIVQEQLVGPTLGQEAVRGGSL
                     SFLISFIVIFALMLIYYNTAGWVANIALILNLLFTIGILTSWGFTLTAPGIAGLVLTI
                     GMAVDTNVIIFERIKEELTKGKSYVLAVSDGYKRSYAPVIDAHVTTFLTAAILFIFGL
                     GPVLGFATTQMLGITLSLFCGILVSRLITDFYTNKQ"
BASE COUNT         1235 a         1018 c         1077 g         1134 t
ORIGIN      
        1 cgaggataag aagcgttgcc acgaaaagaa aagaagcatt tttcttcgcg aacgatttgg
       61 tcctgtaaaa aaacaagata taacacacct gcaccaccag gaaagaggcc aggccgaagg
      121 caaaattata ggttccctca ctgtccacga ggaacaagtc accgataaag gaaaagatca
      181 gcgcaacaca tataagccgc acgaatggta gtgcgcgatc atgcaggcca tcatttactt
      241 caataagaaa aaaagcgagc agcagcggca tcaataaacc cttcgtaaaa taccttgtgg
      301 gtgcagttcc cagtttgccc agcacagaat caaaaacgaa agccgcgaca tataaaatta
      361 tgaggaggaa agagattcgc ttcatcaccg cttattgttt tggcggaatt tcaacccgga
      421 tatttctttg gaggaatttt tggatggaat ctttaacggc gagcgtgtct gcgatccgcg
      481 tttttttata aatgaatagc gagtagaatc tcttattacc gttcatgaag ctgtcatagg
      541 ccgccttatt tccaaagctg ataagttgtg ctgttcttgt tttcgcccgt agccgcaggt
      601 ctgtggtctc gaaaataaag cgcgcgtcaa ctgagtcgtt gggaccgtaa gtagcatttg
      661 tcgtcgcaac ggaatcgggc gttgcaattg atgctgacga atcagtggag gtgctatctg
      721 tttccgcggt tggtaccgaa gcaggtttcg gtttcatgta gtaaacgtac gcctgccagc
      781 caaggcctcc aataatagca agcacgatca ggaacgtcaa cacctgcact ccggagccgg
      841 cgcgcctcct tgtagtcggt tttgaaggct ggctgcggct cttctgcgct ttgcccgaat
      901 gcggataggg catgaactcg tattcctggc ggacgttgca ttttattagc ccggcattca
      961 aaacctcaaa aggttttcct atgttcagaa attcgcgcac ctgggtgaag tgcgattcaa
     1021 gatcagattc gatcaacgac cttaactttc ccgacctttc ggtgataaaa tcgatcaggc
     1081 cgggcgacgt ggcgatcttc cggtcgtaaa caaagctcac ggaaccggct tccgcagaat
     1141 ccgggtgatc tgttgttaat ttaagcgacc ctatcttttc aagatctact tctttgttgg
     1201 caattagata ttcggttata taagcgtcgt aacggttcac aataatttta atggctttaa
     1261 taatcgcagc aaaaatattt tattgtggct gaaaagaggt tacaaaaaat tcacagtgct
     1321 taatttgcgg acgcaatata aattgttgca atacgtttcg cttataatcg tcgacgtatg
     1381 gattgatcca atgctaacaa aacaagaaga ggcctttttg aattactggg aacaaaatcg
     1441 cgaaagagaa aaatccgttg tcaggcaatt ttttccaggc ctgccgatag gatttgcgat
     1501 cgcggccgcg atattactcg ttctggattc cgggtggtat gaaagagcaa acatcgtcgc
     1561 acagtcagaa agcagccctg tgatcatatt tatcggagtt cttgcaatcg ttgcttttac
     1621 cgggtttttc tataaaaaat accgatggga aatgaacgag caaacctacc aggaactaaa
     1681 gctgaaaggc agaaaagata aacaaggaac cgaagctaat gagtaagcga atgaaaatga
     1741 aaacactttt actgttctct gctactgtcc tctttcttat tacctgcaaa aaaaatgatt
     1801 ccggttgtat gtcggttccg ccggcggatg aagccggtgc gatggccgca ttttgtgttg
     1861 attatggtat tgattatacg gtggacagca acggtatcta ctatgagatc gttgatcccg
     1921 gctccggggc aacggcatcc ctggactcgc ttatcacggt cacgtataca acatcccttt
     1981 tgaatggcga cctgatcgag gaccattcag acagcgccat cactctgcca ttaagcaagt
     2041 ttattgaagg ctggaggata gcgatccctt atattcatga aggcggacac ataaaaatgg
     2101 tgatcccttc cgcccttgct tatggttgta gcggcagcgc aggcatggtg ccgccggatt
     2161 cgcctatcta caacgatgtt gtgctgatta aggtgtcaca ttaacgcctc attgtcgcct
     2221 ctattttcac tgtttattga gcctattttc tctgttcgtg tttgtttcaa acccctatct
     2281 ttgccgctct caaaaaaatt cctagaatat gcaactgaaa gggttggtgc ggttttttgc
     2341 cattgcactt atacttatct gcttatatca attatcattc acctggatcg tacacagcta
     2401 cgagtcttca atgcgcgaaa aggcggagct gtatgtaaag gcaactcacc cttctccgga
     2461 gacaaaatac cccaacaaca aacagttgca gcaaatgtac cgggacaccg tagaggcttt
     2521 ggagaagcaa aggctgcagc gtttgcttga cagtacgaaa gattccaaga taggcccctt
     2581 cggtatgacc acttaccgca gcgcaaagga caaggaattg atgctcgggc tggacttgca
     2641 gggaggaatg agtgtgacga tggaagtggg tttggatggg ttgatcaaat cgcttgcaaa
     2701 ctatacaaag gacccggttt ttaataaagc tcttagtgca gcagttcaga agaaagcaac
     2761 cagcggagct gacctcatca ccttatttgg ggcggagttt agaaacgcta gcgccggggc
     2821 aaaacttgct ccctatttca tatcgcgcag caacggcagg ataaagtttg acgcctcgga
     2881 tgatgcggtg ttgaattacc tgcgtgagca ggcaagcagc gcctttgaaa atacggaaag
     2941 aatattgaga acgcgtattg accgttttgg cgtcgcatcg ccgaacatca atcccgaccc
     3001 taagaaaggg atcatcaata ttgaactggc tggcgtaaac gacccggaaa gagtgcgcaa
     3061 atatcttcag tcaacggcca acctgcagtt ttttgaggtg tacaacattg ctgacttaaa
     3121 cgataatata aatgccgcgc aaaaagcttt atcagactat ctgaaaggca gctctgcttt
     3181 agctcaaacc gacacaacga aaaccggcac tgccgatacg ctgaaaactg ttgctgccga
     3241 tacttcgaaa attgacacag gtgccacagt taataagacc gttgacacaa atgcaatagg
     3301 tggatttgac aatgtgaaaa atcctgcggt taaagctccc ggcactgcag gaaatacgaa
     3361 cgcaaaggaa gattccaacg ccattaaaag aaaggaactg ccgttgcaaa gcgttatcca
     3421 gttcattggc ccccaacagg accaacaggg taaaacgtat tattcagcta atctcgggta
     3481 cgtttcaacg aacgacaccg gcttgcttaa ttcttacctc aacatggacc ttgtgaaaaa
     3541 caagttccct gcaaaccttg ttttcatgta tggcaagcct gaaaatgctg agatagcttc
     3601 caggaatttg cttgccttgt atgcgatcaa gacgctggac aacgggcagg caaaacttga
     3661 ggggcaacat gttactgtgg cacgacagga ttatgatgag cgcggtgcgc ccgccatcag
     3721 catgcaaatg gacggtgaag gcacgcggat ctgggcaaag atgaccgcag acaacaagtc
     3781 aaaaccaatc gcgatcgttt tggataatgt ggtgtacagc gctccaaatg tgctgaacgc
     3841 catcaccggc ggcaattcac agatcaccgg gaattttacg gtagaagcag cacaggatct
     3901 cgccaacatt ttacagtccg gcaagttgcc ggctcccgcg aggatagtgc aggaacaact
     3961 ggttggtccc acgttagggc aggaggctgt gcgcggcggc tcgctttcat tcctcatctc
     4021 gttcatcgtg atcttcgcgc tgatgctcat ctattataac acggcaggct gggttgcgaa
     4081 tatcgctctt atcctgaacc ttcttttcac gatcggcatc ttaacctcgt ggggcttcac
     4141 attaacagcg cctggtattg ctggcctggt gttgaccatc ggtatggctg tggatacaaa
     4201 cgtgatcatt tttgaaagaa taaaagaaga gctaacaaaa gggaagagct atgttcttgc
     4261 ggtgagcgac gggtataaac gctcgtatgc gcccgtgatc gatgcgcacg taacaacatt
     4321 cttaacggcg gccatattat ttattttcgg gcttggtccg gtgcttggtt ttgcaacaac
     4381 ccagatgctt ggtataacgc tgtctttgtt ttgcggcatc cttgtttcgc gccttatcac
     4441 cgatttctat accaataaac agag
//
LOCUS       DASQJI010000264         9812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_488266,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000264 DASQJI010000000
VERSION     DASQJI010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9812
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488266"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VEV83_07440"
     CDS             complement(<1..1337)
                     /locus_tag="VEV83_07440"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HYK44983.1"
                     /translation="MGDKHYSFFENVTRSFDKAARFTKWESGVLEQIKACNAVYQMKF
                     PIRRDDGSIEVIEAYRVQHSHHKTPCKGGIRFSEEVNQDEVMALAALMTYKCAIVNVP
                     FGGAKGGIKVNPRDYSPFELQKITRRYTSELIRKNFIGPGTDVPAPDYGTGDREMAWI
                     LDTYMAMHPGEVDAMGCVTGKPVTQGGVRGRKEATGLGVFYGIREVCCMPDLMERIGL
                     TPGVEGKTVVVQGLGNVGYHSAKFFREAGAKVIAISEYEGAICNDNGLNEEEVFQYRR
                     NNKSILGFPGSRNLTTSSEALELECDILIPAALENVINAGNAERIKARIIGEAANGPL
                     TPEADEILAKKNTLIIPDMYLNAGGVTVSYFEWLKNLSHVRYGRMEKRFTENLNKQIL
                     GQIEELTGKDVDAGERSRIEHGPDEVDLVYSGLEQTMIEATREIVSCWKANKD"
     gene            complement(1400..1639)
                     /locus_tag="VEV83_07445"
     CDS             complement(1400..1639)
                     /locus_tag="VEV83_07445"
                     /inference="COORDINATES: protein motif:HMM:NF040113.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CcmD family protein"
                     /protein_id="HYK44984.1"
                     /translation="MPDLKKIIFFMFMALNVISSYAQDMDHATEEPTDLMNSNGKIYV
                     VMAVVIIIVLGLFLYLINLDRKMKKLEDKETQKTK"
     gene            complement(1632..2312)
                     /gene="ccsA"
                     /locus_tag="VEV83_07450"
     CDS             complement(1632..2312)
                     /gene="ccsA"
                     /locus_tag="VEV83_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HYK44985.1"
                     /translation="MLRRSWWKILSFILLMYTCTMGFLVKIPVLDGRMQQTVRNLFFH
                     VPMWFCMQTLFIISVVYAVFYLARSKPVHDVYSLEFARTGLVFGVLGLITGAIWANYQ
                     WGSPWSGDPKQNGAAIALLIYLAYFVLRGSVNDETKRARISAVYNIFAFAMLFPTIWI
                     LPRLTESLHPGGQGSEGNPGLNPGDTSPEMERVFLPAIIGWILLGVWISTLRARYTIY
                     KEKILAGA"
     gene            complement(2412..3074)
                     /locus_tag="VEV83_07455"
     CDS             complement(2412..3074)
                     /locus_tag="VEV83_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HYK44986.1"
                     /translation="MKYSYRQILSLVKKDVLLEMRQQYTFYGVLLYVASTVFIVYLAA
                     GQPDEQTWNALFWIVQLFVSVNAVAKSFLQDSRGRMLYYYTISGAANFIIAKMLFNAF
                     LMMLMSFLTLLIFVLLLGDPIIYFLKFLLVSFIGGIGLSLLFTFLAAIAAKAQQQAAL
                     MAIMGFPIAVPQLLLLGKVSSRAFSDVVQAGWTQMLLLLICLDILIVALSIILFPFLW
                     KD"
     gene            3174..4169
                     /gene="pdhA"
                     /locus_tag="VEV83_07460"
     CDS             3174..4169
                     /gene="pdhA"
                     /locus_tag="VEV83_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HYK44987.1"
                     /translation="MPVKFTKETYLYWYELMQLIRQFELKAEEMYKMAGKIRGFFHAY
                     VGQEAIAAGCMTATRQEDIFITAYRDHGLALAKGVSANACMAELYGKATGLAKGKGGS
                     MHFFSKEHFFYGGHGIVGGQIGVGAGIAFAENYKGTDNVVMCFFGDGAARQGVLHETF
                     NLAMLWKIPVVFICENNNYAMGTSVERTSNVIDIYKLADAYDMPGDKVDGMSAEAVHE
                     SIARAVKRAREKGGPTLLEMKTYRYKGHSISDPGKYRTKDELEEYKSKDPITLILKTI
                     NDNHFASEEELKKIDDRIGKIVDESVKFAEESPWPDDDELLKDVYTDKNYPFIVD"
     gene            4217..4912
                     /locus_tag="VEV83_07465"
     CDS             4217..4912
                     /locus_tag="VEV83_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44988.1"
                     /translation="MADKHVQEATSTDVVLKAKSFWSKNQKPLLTVIVILVVLIGGWF
                     VYKNYVVAPKEEEAQNAMFRAEQYFREDSLKLALNGDKFNRGFVYIINNYGSTKSGNL
                     ARYYAGLCCLRTGDFNKAATYLKDFKTSAKQVQMMAYGALGDAYSELNKNDDAVTYYK
                     KAAEEFTDDVAMTSEYLFRAALKLETTGKNSEALELYKELKQKYPTTERGFAADKYIY
                     RLSIVPNDFSVSK"
     gene            4912..5391
                     /gene="ribH"
                     /locus_tag="VEV83_07470"
     CDS             4912..5391
                     /gene="ribH"
                     /locus_tag="VEV83_07470"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HYK44989.1"
                     /translation="MSTTGNNALQKGIPRLKDAFIVIVKTEWNKNIVDKLESGAITIL
                     QEQNIKYRTVTVPGSFEIPFAVRAYAHGKKKADAFIALGTVIRGDTPHFDYVCKAITD
                     GVLSLNLMLDVPVIFGVLTVNDEQQANDRAGGAHGNKGEEAAITAIKMIVLNRKLKK"
     gene            5420..6136
                     /locus_tag="VEV83_07475"
     CDS             5420..6136
                     /locus_tag="VEV83_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HYK44990.1"
                     /translation="MNVQIFIPCFIDQLYPSVGFNMVKVLEKAGCGVSYNTNQTCCGQ
                     PAFNAGFWGEAKDVCKKFLKDFTGNEYIVSPSASCVGFVRNYYMKVFEFSSFLSDYKK
                     LQSNIFELSDFLVNVLHFTDFNATLQATATYHDSCAALRECNLKNEPRVLLSKVNGLQ
                     LLEMNDVETCCGFGGTFAVKFEPISIAMADQKVANAALTNAQYIISTDMSCLMHLDAY
                     MKKKGMEIKVLHLADVLANF"
     gene            6352..7377
                     /locus_tag="VEV83_07480"
     CDS             6352..7377
                     /locus_tag="VEV83_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HYK44991.1"
                     /translation="MKYQTGDDIIILHTQEEGKVIEVINDKMLLVEVRGVRFPAYIDQ
                     IDFPYFHRFTKKQKPAPKQPVKKYIDDLPKEKDKSPSIGKDEGVWLSMVPKFTLDDFN
                     DEVVELFKLYLINKNDAGYRFNYQQQFFGEDSFDLKGEVWAHRDFYLHDIAFSDFNDN
                     PSFIFNFSLLSPDKKKADHFETSVKLKPRQLFQRIEEMKQKNEPTMAFKLFDEYPGKQ
                     IEEKIDVPEKVQRQFKIYEAEKVREHLEPPRSVIDLHIEKLSGDWQRLSNFEILNMQL
                     KEFQKWYDLAVAHRQPNLIAIHGVGSGKLRDEIHDILKTKKEVKNFINQYDPRFGYGA
                     TEIFFQY"
     gene            7529..9397
                     /locus_tag="VEV83_07485"
     CDS             7529..9397
                     /locus_tag="VEV83_07485"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HYK44992.1"
                     /translation="MIKYFQLPVLLLLLHTLSYAQTNNAYKFKIDLVNVSDDKVRVEL
                     TTPAIKSNTITYHVPKIVPGTYSEDDYGRYIAQFKALDKNGKELSVTQSDLNSWSIAD
                     AGKLYKISYLVNDTYDSLDAKPAIFEPAGSNIQKDTNYVINNHCFLGYFDDMKNVQYE
                     ITIQHPANMYGSTALTDMDNSNTSDKFITESYNRIVDNPFMYDVPDTTTIKVGNTNVL
                     ISLYSPNKKVSSKFLAEKLDTLLQAQGKYLGGKLPVDKYAFIIYLNDKRGPSGAEGAL
                     EHSYCSMYYYPERSAAQLSAEFVDHAAHEFFHIITPLTIHSEEIQFFDFNHPKMSQHL
                     WLYEGSTEYHAQMVQVKYGLITPEQLLNRISGKITQSRNNYNDTVPFTKMSSQVLGQY
                     KNQFGNVYQKGALITMCLDIKLLQLSNGNYGILNLIRDLSNKYGKQKGFKDDELFGEI
                     TKLTYPEIGEFLNTYVGGNQPLPLKEVLDLVGVTFKDEEETKDSAFSMGKVSFTASNG
                     KLAIADTSQINSLGRSMGYHPGDEIVSVNGEEVSLAKASSLFKNFGASSKPGDSLIVN
                     VMRKNENGESMPVTLRGVMTKFPIIKYNVLGFSGAPTQEQLKLRDAWLKPRAGVNQ"
     gene            complement(9580..>9812)
                     /locus_tag="VEV83_07490"
     CDS             complement(9580..>9812)
                     /locus_tag="VEV83_07490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44993.1"
                     /translation="IQKFYLMKKIILHSFVCAGLIIFAGSCSKDVKTPVKTTNATSTN
                     KTTTTTTTTTTTTTDHTGGCGADHTGYNGGGG"
BASE COUNT         2946 a         2084 c         2174 g         2608 t
ORIGIN      
        1 atgtctttgt ttgctttcca acagctcaca atttctctcg tcgcttcgat cattgtttgt
       61 tcaaggccgc tgtaaacaag atcaacttca tcaggcccgt gctctatgcg tgaacgctcg
      121 cctgcatcta catctttgcc agtgagctct tctatctgtc cgagtatttg tttattcaga
      181 ttttcagtga aacgcttttc cattcttcca tatcgcacgt ggcttaaatt cttcaaccat
      241 tcaaaatacg aaacggtaac accacccgcg ttcaggtaca tatcgggaat aataagcgtg
      301 tttttctttg caagaatttc atcagcctca ggtgttaatg gtccattggc cgcttcacca
      361 atgatccttg cttttatcct ttctgcgttg cctgcattga tcacattttc gagcgcagcc
      421 gggattagaa tatcgcactc gagctcgagc gcttcagagc tcgtcgttaa attccgtgag
      481 cctggaaagc cgaggatcga tttattgttc cgcctgtatt gaaacacttc ttcttcattc
      541 aagccattgt cattgcaaat cgcgccttca tattctgaaa tagcaatcac ttttgcgccg
      601 gcttccctga aaaattttgc actgtgatat ccaacattgc cgagtccctg cacaaccaca
      661 gtttttcctt caacaccggg agtcaagcca atgcgttcca tcaagtcggg catgcaacaa
      721 acttcacgga tcccataaaa aacgccgagc cctgtcgctt ctttcctgcc gcgaacacca
      781 ccctgggtca ccggttttcc ggtaacacaa cccattgcat ctacctcgcc cggatgcatc
      841 gccatgtatg tatcaagtat ccacgccatt tccctgtcac cagttccata atctggtgca
      901 ggaacgtcgg tgcccggacc aataaaattt ttcctgatga gctctgatgt atagcggcgc
      961 gtgatctttt gcaattcaaa cggactgtaa tcgcgcggat tcactttgat accgcctttt
     1021 gcgccgccaa atggcacatt tacgatcgca cacttgtaag tcatcaaagc ggcaagcgcc
     1081 atcacctcat cctggttaac ttcttcgcta aagcgtatac cgcctttgca aggagttttg
     1141 tgatgcgaat gctgaacccg gtacgcttcg atcacttcaa tggagccatc gtcacgacgg
     1201 atcggaaatt tcatttggta gacagcatta caagccttta tttgctcaag aacgccggat
     1261 tcccactttg taaatcttgc agccttgtcg aaactccttg taacattttc gaagaaacta
     1321 taatgtttat ctcccatact atgtatttaa atgataaaag taaactaatg aacatttgtt
     1381 tttcaagagt gaaaaaattt tattttgttt tttgtgtttc cttgtcttca agctttttca
     1441 ttttcctgtc aagatttata aggtacagga aaagaccgag cacaattatt attactactg
     1501 ccatcacaac gtagatcttg ccattactat tcatgagatc tgttggttct tctgtggcat
     1561 ggtccatatc ctgcgcataa ctgctgatga cgttcaacgc catgaacata aaaaatatga
     1621 tcttctttaa atcaggcacc ggctaatatt ttttctttat agatcgtata tcgggcgcgg
     1681 agtgttgata tccatacgcc aagcagtatc cagccaatga tagcaggcag gaaaactctt
     1741 tccatttcgg gcgacgtatc gccgggattc aagccgggat taccctcgct gccttgtccg
     1801 cccggatgaa gtgattctgt tagtcttggc agtatccaga tagtaggaaa caacatcgca
     1861 aaagcaaaaa tattatagac tgcacttatt cgtgcgcgtt ttgtttcgtc gtttaccgat
     1921 cctctcaaaa caaaatacgc gaggtagatc aaaagtgcaa ttgcggctcc gttttgtttt
     1981 ggatcgccac tccatggcga gccccactgg taatttgccc aaatggcacc tgtgatcaaa
     2041 cccagcacgc caaacactaa accagtacgc gcaaattcga gcgaatacac gtcgtgaaca
     2101 ggctttgacc tggccaggta aaacaccgca taaactacgg aaatgataaa caatgtttgc
     2161 atgcagaacc acatcggcac atggaaaaat aaattgcgta ccgtctgttg catcctgcca
     2221 tcaagaacgg ggatctttac aagaaaaccc atggtgcaag tgtacatcag caatataaaa
     2281 ctcaatattt tccaccagga tcttcgaagc atcgtaagat tttatgaagc cgctaccttt
     2341 ctgccgcgca aaaatagtgg aagctttcta atcaacaagg aaagcatcac atcagttaac
     2401 catcgttcca gctaatcctt ccataaaaac gggaataaga ttattgaaag tgccactatc
     2461 aatatatcaa ggcagatcaa gagaagcaac atctgcgtcc agccggcctg taccacgtcg
     2521 ctaaatgccc ttgaagaaac tttccccaat agtaacaatt gaggcacggc gatcggaaaa
     2581 cccatgatcg ccatcaatgc agcttgttgc tgcgccttag ccgcaatggc cgcgaggaat
     2641 gtaaacaaga ggctcaggcc aatgccccca ataaaactaa caagcaagaa cttcaaaaaa
     2701 tagatgatgg gatcaccaag caggagaaca aatattagca gggtgagaaa actcatcaac
     2761 atcatgagaa atgcattgaa aagcattttt gcgatgataa aatttgccgc tcctgagatc
     2821 gtatagtaat aaagcatccg gcccctgcta tcctgtagaa agcttttagc tacggcgttt
     2881 accgaaacaa acaactgaac gatccaaaac aacgcattcc atgtttgttc gtccggttgc
     2941 ccagcagcca ggtaaacaat gaaaacggtg gatgcgacgt acaacagtac tccatagaat
     3001 gtgtactgct gccgcatttc gagcaaaaca tcttttttta caagcgatag tatttggcga
     3061 taagagtatt tcatgctctc cgcaaatata gcctgcaaag ttgttgacgg cagcctttcg
     3121 ctaagttggg atatttaacc tttgcgctta tatttgcggc tcaaatttgc gctgtgcctg
     3181 taaaatttac aaaagaaact tacttatact ggtatgaatt aatgcaactg atcaggcagt
     3241 ttgagctgaa ggcggaagaa atgtataaga tggcaggcaa gatccggggt ttctttcatg
     3301 cgtatgttgg acaggaagcg atagctgcag gttgcatgac agcaaccagg caggaagaca
     3361 tttttatcac tgcctaccgg gatcatggac tcgcgctggc aaaaggtgtg agcgcaaatg
     3421 cgtgtatggc tgaattgtat ggcaaagcca cagggcttgc aaaaggaaag ggtgggagca
     3481 tgcatttctt tagcaaggaa catttttttt atggcggcca tggaattgtt gggggacaga
     3541 taggagtggg ggcggggatt gctttcgccg aaaactacaa aggcaccgat aatgttgtga
     3601 tgtgcttctt tggcgatgga gctgcaaggc agggcgtgtt gcatgagacc tttaacctcg
     3661 cgatgctctg gaagataccc gtagtattca tttgtgaaaa taataactac gcgatgggca
     3721 cttctgttga gcgcacttct aacgtgatag acatttataa actggccgat gcgtacgata
     3781 tgccgggaga taaagtagac ggaatgagcg cggaagccgt gcatgaatcg attgcgagag
     3841 cagttaaaag agcaagggaa aaaggcggtc ctactttgct tgagatgaaa acgtatcgct
     3901 acaagggaca ctccatttct gatccgggaa aataccgcac gaaggacgag ttggaagaat
     3961 acaaaagcaa agacccgata acgttgatct tgaaaactat caacgacaac cattttgcga
     4021 gtgaggaaga gcttaagaag atcgatgatc gcatcggtaa gatcgttgat gagtctgtaa
     4081 aatttgctga ggaaagcccc tggcctgacg acgacgaatt gcttaaagat gtatatacgg
     4141 ataagaacta tccttttatt gttgactgat actgtgctaa atttcaaatc aattttctta
     4201 aatattcaat tgtattatgg ctgataaaca tgtgcaagag gcgacctcaa cagatgtagt
     4261 tttaaaagca aaaagtttct ggagtaagaa tcaaaaaccg ctgcttaccg tcatagtaat
     4321 actcgtggtc cttataggcg gatggtttgt ttacaaaaat tatgttgttg cgcctaagga
     4381 ggaagaagca caaaatgcga tgttcagggc ggaacaatat tttcgcgaag actctttaaa
     4441 gctggcactc aacggtgata aatttaaccg cggctttgtt tacatcatta ataactatgg
     4501 ttctacaaaa tcaggcaacc tcgcgagata ttatgcgggc ctttgctgtt tacggaccgg
     4561 tgattttaat aaggcggcga catacctaaa agattttaag acgagcgcaa agcaagtaca
     4621 gatgatggcg tatggagcgc tgggagatgc ttacagcgaa ctgaataaaa atgacgacgc
     4681 tgtaacgtat tacaaaaaag cagccgaaga atttaccgac gatgttgcca tgaccagcga
     4741 ataccttttt cgggccgcat taaaactcga aacaaccggc aagaacagcg aagcattgga
     4801 attgtacaaa gaacttaaac aaaaataccc gacaacagaa aggggctttg cggcagataa
     4861 atatatttat cggttaagca ttgtgccaaa cgatttcagc gtaagcaaat aatgtcaaca
     4921 accggaaata acgcattgca aaaaggcatc cctcgattaa aggatgcctt tatagttatt
     4981 gtaaaaacgg agtggaataa aaacattgtt gacaagcttg aatcgggcgc aataacaatt
     5041 ctgcaggaac aaaatattaa atacagaact gtcaccgtac caggctcatt tgaaattcct
     5101 tttgcggtga gggcttatgc ccacggcaaa aagaaggctg atgcatttat tgcgttgggt
     5161 acggtgatcc gcggggatac accgcatttc gattacgtat gcaaggccat aaccgatggc
     5221 gtattatccc ttaaccttat gctggatgtt cctgtaattt ttggcgtgct tacggtgaac
     5281 gatgaacaac aggcgaatga ccgcgccggt ggagcacacg gcaataaagg agaagaagcg
     5341 gcaataactg ctattaaaat gatcgtactg aaccgaaaac taaaaaaata gatattatcc
     5401 gcccgggcgg agatacggca tgaatgttca aattttcata ccatgcttta tagaccagtt
     5461 gtatccctcc gttggattta atatggtgaa ggttctcgaa aaggccgggt gcggtgtatc
     5521 ttataacacc aaccagactt gttgcggaca gccagcgttt aatgcaggct tttggggcga
     5581 agcaaaagac gtttgcaaaa aatttttgaa agattttacg ggcaacgaat atattgtttc
     5641 accgagtgcg agttgcgttg ggtttgtgag gaattattac atgaaggtat ttgagttctc
     5701 ctctttcctg agtgattata aaaaattgca aagcaatatt tttgaattga gcgactttct
     5761 tgtgaacgtc ttgcacttca ctgatttcaa cgccacgttg caggcgaccg cgacatatca
     5821 cgatagttgt gctgcgttga gggaatgcaa tctgaaaaat gagccgcgtg tccttttaag
     5881 taaggtgaac gggctgcagc ttttggagat gaatgacgtg gagacgtgct gcggttttgg
     5941 cggaacattt gcggtaaaat ttgagccgat cagcatcgcc atggcggatc aaaaggtagc
     6001 taatgcagca cttactaatg cgcaatacat cattagtacc gacatgagct gtttgatgca
     6061 cctggatgcg tatatgaaga agaaagggat ggaaataaaa gttcttcacc tggcagatgt
     6121 gctggcgaat ttttaaggaa tatcgcacag agataacgga gaacacaaag aaaatgcgta
     6181 tgtatgaacg ctctctttcg ctgcgttttc tcagctggaa aaaatgaatt ggtagacctg
     6241 ttgataaatt ttgataaatc attcgcgcag aaatacagga gcacttagaa ctcctggctg
     6301 ttgaaaattc tttgttagac ctgttgcctc tgtgcgaaaa atacctctct tttgaaatat
     6361 caaaccggcg acgatatcat catcttacac acacaggagg aaggaaaagt tattgaggtg
     6421 attaatgata agatgctgct cgttgaagtg cgcggcgttc gttttcccgc ctatattgac
     6481 cagatcgatt ttccctattt tcaccgcttc acaaaaaaac aaaaacctgc cccgaaacaa
     6541 cctgtaaaaa aatatatcga cgatcttcca aaggaaaagg ataagtcgcc gtcaattggg
     6601 aaagatgagg gagtgtggct ttcgatggtt cctaaattta cgctggatga ttttaatgat
     6661 gaagttgtcg aactctttaa actatatctc atcaataaaa atgacgcggg ctatcgattt
     6721 aattatcagc aacagttctt tggtgaagat tcatttgacc tgaaaggaga ggtatgggcc
     6781 catcgtgatt tttatttgca cgacatagca ttcagcgatt ttaacgataa cccgtctttt
     6841 atttttaatt tttcactgct gtcgcccgac aaaaagaaag cggatcattt tgaaacctcc
     6901 gtaaaactta aaccgcggca attgtttcaa cggattgaag agatgaaaca aaagaatgaa
     6961 ccgaccatgg cgtttaagct gttcgatgag tatcctggta aacaaatcga agaaaaaatt
     7021 gatgtgcctg aaaaggtgca aagacaattt aagatctatg aggcggaaaa ggtgcgcgaa
     7081 cacctcgagc cgccgcgaag cgttattgat cttcacatcg aaaaactgag cggcgactgg
     7141 cagcggttga gcaatttcga gatcctgaat atgcaactaa aggagtttca gaaatggtac
     7201 gacctcgcgg ttgcacatcg ccagccgaat ctcattgcaa tccatggtgt aggctctggc
     7261 aaattacgcg atgagatcca cgacatttta aaaacaaaga aagaggttaa gaattttatc
     7321 aaccaatatg acccgcggtt tggctatgga gctacagaga tcttttttca gtattgatgc
     7381 tgtgtaaaca gttcacgcgc aaagctggcg tcagccgtcc ctgcaatatt gccattaatc
     7441 cattcctata cactgcttat ccaaatcccc cttttagaaa actgtgtaat tattatcatg
     7501 cgcctcgttt taaaaaaact cattggtcgt gatcaaatat tttcagttac cagttttgtt
     7561 attgttgttg cacactttat cctatgcgca aacaaataat gcctataagt tcaagattga
     7621 ccttgtgaat gtaagcgatg acaaagtaag ggttgaactt actacacctg ctataaaatc
     7681 aaacaccatt acataccatg ttccgaagat cgttccggga acatattcgg aagacgacta
     7741 tggacgatac atcgcgcagt tcaaagcgct tgataaaaac ggtaaagaac taagcgttac
     7801 gcaaagtgat cttaatagct ggtcgatcgc tgacgcgggc aaactgtata agatctcgta
     7861 cctggtcaac gacacctacg attcattaga tgcgaagccg gcgatctttg aacctgcggg
     7921 cagcaatatt caaaaggaca ccaattatgt aatcaataac cattgtttcc ttggctattt
     7981 tgacgacatg aaaaatgttc agtatgaaat aaccatacaa catcctgcga acatgtatgg
     8041 aagcacagct cttactgaca tggataacag caacacgagc gacaagttta taacagaatc
     8101 atataacagg atcgttgaca atcccttcat gtatgacgta cccgatacca ccaccattaa
     8161 agtagggaac acaaacgtgc tgatctcgct ttattcgcca aacaaaaaag taagctccaa
     8221 attcctcgct gagaagctgg atactctatt gcaggcacaa ggaaaatatc tcggtggcaa
     8281 attaccggtt gacaaatacg cgtttataat ttatttgaac gataagcgcg ggccgtcggg
     8341 tgcggaagga gccctggagc attcgtattg ttcgatgtat tattatcctg agcggagtgc
     8401 cgcgcagtta agcgcagagt ttgttgatca cgccgctcat gaattttttc acatcataac
     8461 accgttaacg atccattcgg aggagatcca gttttttgat ttcaatcacc caaaaatgtc
     8521 acaacacctc tggttgtatg aaggttccac ggaatatcat gcgcaaatgg tgcaggtgaa
     8581 atacgggctc attacgcctg aacaactgct caaccggatc agcggcaaga tcacgcaatc
     8641 gaggaacaac tacaatgaca cggttccctt tactaaaatg agcagccagg tcctcgggca
     8701 atacaaaaat caattcggca acgtgtacca gaagggtgca ctcattacga tgtgccttga
     8761 cattaaactc ctgcaattat caaatggcaa ttatggaatt ttgaatttga tccgtgatct
     8821 gtcaaacaaa tatggtaagc aaaaaggttt caaagatgac gagctatttg gtgagataac
     8881 gaagttaacg tacccggaga tcggcgaatt tctgaatact tatgttggag gaaaccagcc
     8941 gttgccatta aaggaagtgt tggacctggt tggtgtaaca tttaaagacg aggaggaaac
     9001 gaaggacagc gcgttttcaa tggggaaggt atcatttacg gccagtaatg gcaagctcgc
     9061 tatagctgac acctcacaaa tcaacagtct gggcagatcg atgggttatc atccgggcga
     9121 tgagatcgtt tcagtaaacg gcgaagaagt ttcgctcgca aaggcaagca gcttgtttaa
     9181 aaacttcggc gcatcgtcaa aaccaggcga cagcctgatc gtaaacgtga tgcgtaaaaa
     9241 tgaaaacggc gaatcgatgc cggttacttt acgcggtgta atgaccaaat tcccgataat
     9301 aaaatataat gtgcttggtt tttcaggtgc acccacgcag gagcagctca aattacgcga
     9361 tgcatggcta aagccaagag caggagtgaa tcaatgagtg atgagtaatg aatgatgagt
     9421 aatgaataat tctaggttca acaaataaat gcaaagtaat taataattga atctagcaat
     9481 gagtaatgaa taatgagtaa tgagcaacga ttagatacac ggtcaattta cggctccaaa
     9541 accgataatc ccaattaccc aatataacca attaacccat cacccgccac ctccgttata
     9601 cccggtgtgg tctgctccgc aaccgccggt gtgatctgtt gtcgtcgttg ttgtggttgt
     9661 ggttgttgtc gtcgttttgt tggtgctcgt tgcgtttgtc gtcttgactg gtgtttttac
     9721 atctttcgag caactgccgg caaatatgat caagccggcg caaacgaaac tgtgtagaat
     9781 tatttttttc atcaggtaaa atttttgaat ta
//
LOCUS       DASQJI010000265         3741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_181334,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000265 DASQJI010000000
VERSION     DASQJI010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181334"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="VEV83_07495"
     CDS             <1..358
                     /locus_tag="VEV83_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44994.1"
                     /translation="AENLGKFHIQSGVLNKLDFQFTATNEKASGQIVGVYHDLVIDRL
                     KLDEDNELKKAKVATFLLHHLIIPKNKDVSLPVEKRTGKIDYARDPTRLVTFYLLKAL
                     LDGIRDSFSLGFLLPK"
     gene            complement(447..1883)
                     /locus_tag="VEV83_07500"
     CDS             complement(447..1883)
                     /locus_tag="VEV83_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK44995.1"
                     /translation="MANKVYDFNTTCQEAYKEITSLRLANGQKLTALARQQNPDNLIP
                     DMLDSYVDFFILFFNEDPAELKARKSHFDTHLDHLADGPSSSPFYNYCRSVVLIQRAC
                     VEIKFGERWSAGWDFRKAFSLIKDNRKRFPTFVPNNMVYGPMQVAAGTIPDGYKWLAG
                     LFGIKGSISSGMALMQNVVNSNDVYAKMFFNEASFYYCYIMFYIQNQPEQVFKYISQR
                     NLDLVNNHLLAYMAANLAVNNKMNEYARNIIQNKNDSPAYMQTPVWNFEMAYIQMRHL
                     ELADATRNFEYFISHFNGKFYVKDACEKLSWCYYLQGNIAAASNARQMVLKKGNSETD
                     ADKQANKDAKANKWPNALLLRARVLNDGGYNTQALALLEKKTAKDFAKVEEQLEFTYR
                     LGRIYDDMENDEAAIKNYLSAISIGVNMTEYYASRAALQIGMIYEKQGNKQLAIEYYR
                     KCLNMDDHDYKDSIDQKAKAGIARCTGG"
     gene            complement(2013..2768)
                     /locus_tag="VEV83_07505"
     CDS             complement(2013..2768)
                     /locus_tag="VEV83_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HYK44996.1"
                     /translation="MPTVKEYSVEEKLASLVRLQKIDSKLDEFQILKGELPMEVSDLE
                     DEIQGLHSRQTRIEEEINGITDFIEQKKNAIKESEGLVKKYEKQSGAVKNNREYEAIN
                     KEIEMQQLEGKLAEKHIRDANEELAEKAKLLEQTKKHIAAKENALTQKKSELEKIIVD
                     TEKEEKHYAKVSSDAREHIDDRLLYSYDRIRKSYRNGLAVVPVVRDACGGCFNAIPPQ
                     RQSEIRQHKKIIVCENCGRILVDDDLNAATEVK"
     gene            complement(2871..>3741)
                     /locus_tag="VEV83_07510"
     CDS             complement(2871..>3741)
                     /locus_tag="VEV83_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HYK44997.1"
                     /translation="GKTYVERTIISAIKDDVAIYAVHTNLDNVIKGVNDKIADKLNLV
                     NRRVLSAKENMLMKLYTFVPSARAEEVRSAIFAAGAGQIGNYSECSFNTNGKGTFKAG
                     ENTDPFVGEKGKRHEEDEVKMEIILPAHIKQQVVNALIKSHPYEEVAYDLIALENEFD
                     KAGSGLVGELQDEIGEEQFLFALKDAFNLHVIRHTPLLNKPVKTIALCGGAGSFLIDK
                     ACAAGADFYVTADVKYHEFFDADSRMVIADIGHWESEQFTIDLLHDFLQAKFPTFAVL
                     KTGIKTNPVHYFT"
BASE COUNT          921 a          899 c          776 g         1145 t
ORIGIN      
        1 tgcagaaaat ctcggaaagt ttcatataca aagcggcgtg cttaacaaac tcgattttca
       61 attcactgcc accaatgaaa aagcatcagg gcaaatcgtc ggcgtttatc atgatctcgt
      121 tatagacagg ctaaagctgg atgaagacaa tgaattgaaa aaggctaaag tggcgacttt
      181 tttactgcac catttaatca ttccaaaaaa caaggacgtt tcgctgcctg tcgaaaagcg
      241 aacgggaaaa atcgattacg cgagagatcc gacacgcctg gtgactttct accttttgaa
      301 agcgctcctc gatggaatac gggatagttt cagcctcggg ttcttactac cgaaatagaa
      361 gtgattatcg tatcggggct aaagccttgt taggtttaat tttgaaaatg agagttagtc
      421 tatgaaacat taacctctca acgcgattat cctcctgtgc agcgtgcaat tcctgccttc
      481 gctttttgat caatggaatc cttgtaatca tgatcatcca tgttgaggca ttttctatag
      541 tattcgatcg cgagttgttt gttaccctgc ttttcataga tcatcccgat ctgcagcgcc
      601 gcacgcgagg cgtaatattc ggtcatattc acgccgatgg agatcgcaga taaataattc
      661 ttgatcgcgg cttcatcatt ttccatgtca tcatagatcc ttccaagccg gtaggtaaat
      721 tcaagctgtt cctcaacctt tgcaaaatct tttgctgttt tcttttcgag caaagccaaa
      781 gcctgcgtat tataaccacc gtcattcaat acacgggccc gcagcaataa agcattcggc
      841 catttgtttg cttttgcatc tttgtttgcc tgcttgtctg catccgtttc ggaatttcct
      901 tttttcaaca ccatttgccg tgcattgctg gctgcggcaa tattgccctg caggtaataa
      961 caccagctca gtttctcgca ggcatccttc acataaaatt ttccattgaa gtgcgaaatg
     1021 aaatattcga aattccgggt tgcatcagcc agttcaagat gccgcatttg tatatatgcc
     1081 atttcaaaat tccatacagg tgtttgcatg taagccggcg aatcgttctt attttgaatg
     1141 atgttgcgcg cgtattcatt catcttattg ttcacagcga gattcgcagc catgtatgca
     1201 agcaggtgat tgttcaccag gtcaaggttt ctctggctga tgtatttaaa aacctgctcc
     1261 ggctggttct ggatataaaa catgatatag cagtaataga aagaggcttc gttaaaaaac
     1321 atttttgcat acacgtcgtt gctgttcacg acgttttgca ttagcgccat accactgctg
     1381 atcgaacctt ttattccaaa caagccagcg agccatttgt atccatccgg gatcgtacct
     1441 gcagcaactt gcataggacc atacaccatg ttgttcggaa caaaagttgg gaaccgtttc
     1501 ctgttatcct ttatcaggga aaacgctttc cgaaaatccc agccggccga ccatcgttct
     1561 ccaaatttga tttccacaca cgctctttgg atcagcacga cactccggca atagttgtaa
     1621 aatggcgacg aagatggtcc gtcggccagg tggtctaaat gcgtatcgaa atgagacttg
     1681 cgtgccttta actcagcggg atcttcgtta aaaaacagga taaaaaaatc aacatagctg
     1741 tctagcatgt caggaatgag gttatcaggg ttctgttgtc gggcaagcgc tgttagcttt
     1801 tggccattcg ctaaccgcag gctggtaatc tctttgtacg cttcctggca ggttgtattg
     1861 aaatcataaa ccttattagc catggctgcg aagcagaagc tgaaaagcaa cagaaaacag
     1921 gagaccgttt ttttcaagac agctttcatc ggcccgaaaa taaaaaagga cgctgaaacc
     1981 ggcgtccttt taaaagaatt tcgatgttaa tgttatttca cttcagttgc agcgttcaga
     2041 tcatcgtcca ccaaaatacg tccgcagttc tcacatacaa tgatcttttt gtgctgcctg
     2101 atctcgctct ggcgttgcgg cggaatcgca ttgaaacaac ctccgcatgc atcacgtacc
     2161 accggtacaa cggcgagccc gttgcggtag ctcttgcgga tacgatcgta cgaatacagt
     2221 aagcgatcgt ctatatgctc gcgtgcgtcc gaagagacct ttgcataatg tttctcctct
     2281 ttttctgtat cgacaattat cttttccagt tcgctcttct tttgtgtcag cgcattttct
     2341 ttagctgcaa tgtgcttttt tgtctgctcg agaagcttgg ctttttcagc aagttcttcg
     2401 ttggcgtcgc gaatgtgttt ctctgccagc ttgccctcga gttgctgcat ctcgatctct
     2461 ttattgatgg cttcgtattc gcggttattc ttcacggcac cgctttgctt ttcatacttt
     2521 tttacgagcc cttccgattc tttgatagca ttttttttct gctcgataaa atcagtgatc
     2581 ccgttgatct cttcttcaat gcgcgtttgc ctgctatgca aaccctggat ctcgtcttcg
     2641 aggtcgctta cttccatcgg aagttctccc tttaagatct ggaactcatc cagtttgctg
     2701 tcgatctttt gaagcctcac tagcgaagca agtttttctt caacggaata ctctttaact
     2761 gtaggcatat tcttaaaaaa tttttatggt accggcttct ttccttgtgg catcacctgt
     2821 tgcgtcgcat tccgttcatc ggtcggttca ttgcgcagca cagttgactt tcaggtaaaa
     2881 taatgcaccg ggtttgtttt tattcctgtt ttgaggacgg caaaggtagg gaatttcgcc
     2941 tgcaaaaaat catgcagcag atcgatcgtg aactgctcac tttcccaatg cccgatatca
     3001 gcaatcacca tgcggctatc ggcgtcgaaa aactcatggt atttaacatc cgccgtgacg
     3061 taaaaatcgg ctccggctgc gcaggcctta tcaatcagaa aactgcccgc gccaccgcac
     3121 aaggcaatcg tttttaccgg cttattcaac aaaggcgtat gcctgataac atgcaggttg
     3181 aatgcgtctt tcagagcaaa aagaaattgt tcctctccaa tctcgtcttg taactcacca
     3241 accaaaccgc tgccggcctt gtcaaattca ttttccaaag caattagatc ataagcgacc
     3301 tcttcatagg ggtgcgactt tattagcgca ttaacaacct gctgtttaat gtgagccggc
     3361 agtatgattt ccattttcac ttcgtcttct tcatgccgct ttcctttttc gcctacgaaa
     3421 ggatcggtgt tttcacccgc tttaaaggtg ccctttccgt ttgtattaaa gctgcattcg
     3481 ctgtaattcc ctatctgtcc ggcgcccgca gcaaagatcg ctgaacgaac ttcttctgca
     3541 cgtgccgacg gcacgaacgt gtacaatttc atgagcatgt tttcttttgc agaaagcacc
     3601 ctcctgttca caaggttgag cttgtcggcg atcttatcat tcactccttt aataacgtta
     3661 tccaggtttg tatgaacggc gtatatagca acgtcgtctt taatagcaga aatgatcgtt
     3721 ctttcgacgt aggttttacc g
//
LOCUS       DASQJI010000266         3317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_335196,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000266 DASQJI010000000
VERSION     DASQJI010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3317
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335196"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1393
                     /locus_tag="VEV83_07515"
     CDS             <1..1393
                     /locus_tag="VEV83_07515"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK44998.1"
                     /translation="VLNFSLAAQNINEYFEHIRNNEAELTAFISQMPKGGDLHNHYSG
                     AVYAESYINWVIEKDFWIDTQTLAVTPDVKAPGTWTKFSALSSQGKLDLYKQKLLQLW
                     STKDYYQTEDGGPEQHFFNTFPAFSPASSINYDSGLLELKRRAIAENVSYIELMLSRV
                     NFPPKKINSADYNITLGQIQSRHDSLELRSVLASLYDSVMKVPIQDSVKSFIRFVHSL
                     HDSLNIDTANFTMRYQTYIARTADAVTTFKNLVASFEAANRDSLIVGVNIVAPEDNPV
                     SMRDYWLHMQMFAFCHQKYKSVKYSMHAGELAEGYVKPEELTWHIDEAVRVAGARRIG
                     HGVDIGYEKNNYELLNYMRKHNVAVEINLSSNEFILGIKNDAHPITLYKRFHVPLVIS
                     TDDAGVNRSSLTEQYVLLASRYKNITYGDIKTFVYNSITYSFLDDAKKQALKKDLDER
                     FKRFENYVMTQQP"
     gene            1507..>3317
                     /locus_tag="VEV83_07520"
     CDS             1507..>3317
                     /locus_tag="VEV83_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HYK44999.1"
                     /translation="MKKIVAAFLALILIMTTAFQLKNHDGKQNDPAPGLPPSNPFNSA
                     SKLLYEAPPFDKITDANYKPALEEGIRQQQEEITKISNNTAAPTFTNTIEALEKTGML
                     LTRVNNVFNLVTGANTDDTLQKLQEEIAPKLAASQDAIYLNGKLFARIEAIYENRTRL
                     QLDAESQRLVEYYYKKFVMAGAKLSEADKTTLKKLNEEDASLSARFTNQLLNAAKAGA
                     VIIDDSSELAGVSQNDRDAFAQNAKAKDLQGKWLIPLQNTTQQPVLQSLSDRAARKKV
                     FDASWNRAEKNDSNDTRATITRLAAIRAEKAKLMGFSNYGAWKLQDQMAKTPEAVNKF
                     FAQLVPAATAKAKQEAADIQALIDEQKGGFELQPWDWNFYSEQVRKAKYNLDDNELKP
                     YFELNKVLHDGVFYAANQLYGLTFKERRDLPVWQQDVRAFEVFDKDGKSFGLFYCDYF
                     KRDNKSGGAWMGNLVDQSNLLGTKPVVFNVCNFTKPAPGQPALLSFDDVTTMFHEFGH
                     ALHGLFASQKYLTLSGTNVARDYVEFPSQFNEHWALYPSVLKNYAMHYKTGQPIPQSL
                     IDKIKNASSFNEGYDLTELLAAASLDLQWHKIPPDSGV"
BASE COUNT         1032 a          740 c          732 g          813 t
ORIGIN      
        1 ggtcctaaac ttttcgctgg ccgcacaaaa cataaacgag tatttcgaac atattcgcaa
       61 taatgaagcg gagcttaccg ctttcatttc acaaatgcca aagggaggcg acctgcacaa
      121 tcactacagt ggcgcagttt acgccgaaag ctatattaat tgggtcatcg aaaaggattt
      181 ctggatagac actcaaactt tggcagtaac accggacgta aaagctcctg gcacgtggac
      241 aaaattctct gcacttagta gccaaggcaa gctggaccta tacaaacaaa aattattgca
      301 gttatggtca acgaaggatt attaccagac tgaagatggt ggcccggagc aacatttctt
      361 caacacattt ccagctttct ctccggcgag tagtataaat tatgatagtg gattgctgga
      421 gttgaagagg cgtgcgattg cggaaaacgt ctcctatatt gaactgatgc ttagccgcgt
      481 taattttcca ccaaagaaga taaattcggc cgattataat atcactcttg gtcaaataca
      541 atcacgacac gattcattag aattaagatc agtgctcgca agtttgtatg atagcgttat
      601 gaaggtacct atccaggata gcgtaaagag ttttattcgt tttgttcatt cgctgcacga
      661 tagccttaat attgacactg ccaatttcac gatgcgttat caaacctata ttgcaagaac
      721 agcagatgct gtgacgacgt tcaaaaatct tgtggcgtcg tttgaggcag caaacaggga
      781 cagcctgatt gtcggtgtga atattgtcgc accggaggac aatcctgttt caatgagaga
      841 ttactggcta cacatgcaga tgtttgcatt ttgtcaccaa aaatataaat cagtaaaata
      901 ttctatgcac gccggtgagc tggccgaagg atatgtaaag cctgaagaac tgacatggca
      961 cattgacgaa gcggttcgcg tggcgggcgc ccgccgcatc ggtcacggtg tggatattgg
     1021 gtatgagaaa aacaactatg agctccttaa ttacatgaga aaacacaacg tcgcagttga
     1081 aataaactta tcaagcaacg aattcatact cggcataaaa aacgatgcgc atcccattac
     1141 tttgtataag cgcttccatg taccgctggt tatatccacc gatgatgctg gcgtaaaccg
     1201 cagcagcctg acagagcaat acgtattgct tgcatcacga tataaaaaca tcacatacgg
     1261 tgacattaaa acttttgtat acaacagcat tacatacagt ttcctggacg atgcaaaaaa
     1321 acaagcactg aaaaaagacc ttgacgaacg atttaaaaga tttgagaatt atgtaatgac
     1381 gcaacaaccg taaccacctt attcagccac cgtcaagagg ttgaaacgct gattcccgag
     1441 gatagaattt ttcaaacctt tttcaaacat ttcaatacct ttcgcgtctc tggataaatg
     1501 agctatatga aaaaaatagt tgctgccttt ttagccctga tattgataat gacaaccgca
     1561 tttcaattga aaaatcacga cggaaagcaa aacgatcctg cacctggcct ccctccctcg
     1621 aatccgttca attcagcaag taagctgctc tacgaggcgc ctccttttga taagataacg
     1681 gacgcaaatt acaagcccgc gcttgaagaa ggcatcaggc aacaacaaga ggaaataaca
     1741 aaaatctcca acaacacagc ggcacccacg tttacgaaca ctattgaagc gctcgaaaag
     1801 acaggcatgt tacttacccg ggtaaacaat gtattcaatc ttgttacagg cgcaaataca
     1861 gatgatactt tgcaaaagct tcaggaggaa atcgctccaa agcttgctgc gagccaggac
     1921 gcgatctacc tcaatggaaa actttttgca cgcattgaag ctatttatga aaatcgcacc
     1981 cgattgcagc tggatgcaga atcgcaaaga cttgtggaat attactacaa gaaatttgtg
     2041 atggcaggcg caaagctttc agaggcagat aagacaacct taaaaaaatt gaatgaagaa
     2101 gatgcatcct taagcgcgag attcacaaat caactgctaa atgccgcaaa ggcaggtgcc
     2161 gttattattg acgactcctc cgaactcgcc ggcgtctcgc aaaatgatcg cgatgcattt
     2221 gctcaaaatg caaaggcaaa agatcttcag ggcaaatggc tgataccgtt acaaaacaca
     2281 acccaacagc cggtattgca atccttgtct gatcgtgccg caagaaagaa ggtcttcgat
     2341 gcgtcgtgga accgggcgga aaaaaacgat tcgaatgata cacgcgcaac catcacccgc
     2401 cttgctgcta tacgcgcgga aaaagcgaaa ctgatggggt tttcaaacta cggtgcctgg
     2461 aaactgcagg accagatggc aaaaacgcct gaggcagtca ataaattttt cgcgcaattg
     2521 gtcccggcgg cgaccgccaa agcaaaacag gaagcggcgg atatccaggc actgatcgac
     2581 gaacaaaaag gtggctttga attgcagcca tgggattgga atttttattc cgagcaggta
     2641 cgaaaggcca aatacaatct cgacgataac gaattgaaac catatttcga attgaataag
     2701 gtgcttcatg acggagtgtt ttatgcagcc aaccagctat atgggcttac attcaaggag
     2761 cgtcgggatc ttcccgtttg gcagcaggat gtgcgggcgt ttgaagtctt tgacaaagac
     2821 ggaaaatcat ttggactgtt ttattgcgat tatttcaaac gcgataataa atccggcggc
     2881 gcgtggatgg gcaatcttgt tgatcaatca aatctgctag gtacaaaacc ggttgtgttt
     2941 aatgtctgca attttaccaa gccggctccc ggccagcctg cattgctaag ttttgatgac
     3001 gtaacaacaa tgtttcatga gttcggccat gcattgcacg gtttgtttgc cagccaaaaa
     3061 tatttgaccc tgtcaggaac gaatgtagct cgcgattatg tcgagtttcc ttcgcagttc
     3121 aatgagcact gggcattgta tccgtcggtc ctgaagaatt acgcaatgca ctacaaaacc
     3181 ggccaaccaa tcccgcagag ccttattgat aagataaaaa atgcatcttc attcaatgaa
     3241 ggctatgacc ttacagagct gctggcagcc gcctcccttg atttgcaatg gcataaaatt
     3301 cctcctgaca gtggtgt
//
LOCUS       DASQJI010000267         3195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_27895,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000267 DASQJI010000000
VERSION     DASQJI010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27895"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..1888
                     /locus_tag="VEV83_07525"
     CDS             278..1888
                     /locus_tag="VEV83_07525"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45000.1"
                     /translation="MHQRLIASLIAVNIFHLLNGQPIITRQIDAGGSSSDNFRSIEIT
                     TDGGFIAGGFSNSGISGEKTQASRGGKDYWVIKYDRQGIKQWDKTIGGSADDELYSVL
                     QTNDGGYLLGGLSWSNISGEKTQKSKGYCDYWIVKVDSFGTIQWDKTIGGTDIEFLTS
                     MCKTSDGGYLLGGMSLSNAGFDKTENCRGGYDYWVVKIGRKGKIDWDKTMGGSQYEYL
                     TSVKQTRDSGIIIGGRSFSNASGEKSQNSRGAGDYWIVKLNNLHEKEWDKTIGGSQNE
                     FPGNVIQMPDDGYIICGSSESGVSGEKSDSSRGYSDYWIVKINKRGTVRWNKTIGGSD
                     LDYAQSVQFTKDSFLIIGGYSYSGLSGEKSENMRGLSDYWIIKLNTKGQLLWDKTIGG
                     SSYDESVVIKETGANKYMIGGTSSSIADYDKTQNSRGEEDFWIVNIQESGLLKHPIAT
                     TIGESFPSNSLKAVSSLKLFPTVATSIVNVEAEGLTVVSVFDRHGRMLLRRTINGASR
                     LNVSGLVPGVYYLKNEQTNAVARFIIER"
     gene            complement(1907..>3195)
                     /locus_tag="VEV83_07530"
     CDS             complement(1907..>3195)
                     /locus_tag="VEV83_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HYK45001.1"
                     /translation="ARAKNVIYLHMAGAPSQLELFDYKPELAKLDGQLCPPSLVEGKR
                     FAFIRGIPKMLGPQAKFSQHGESGAWVSENMPHLATIADELSFLKACTTDQFNHAPAQ
                     LLVHTGAPRLGRPSLGSWVTYGLGTENQNLPGFVVLTSGGKFPDAGKSVWGSGFLPSV
                     YQGVQCRSVGDPVLFIKDPDGMDRDLRKASIDAINEVNEQEYKEYNDPEILSRISQYE
                     MAYRMQIAAPEVMNINDEPQYIHDMYGTKPGQACFANNVLLARKLVEKGVRFVQLFDW
                     GWDSHGTDENLAIDIGFINKCRQIDKSVTALILDLKQRGLLEETLVIWGGEFGRTPMM
                     ENREGKQNPFKGRDHHVDAFTIWMAGGGMRKGVSYGETDEIGYYPINGKVTAFDIQAT
                     ILNQLGFNHEKFTYQFQGRPFRLTDVSGKVIEEIIA"
BASE COUNT          912 a          693 c          751 g          839 t
ORIGIN      
        1 aagtgagttg gaagattgcg atacgcgcta tcaacaggtt tacctatcga agcaggtgct
       61 gccggaatgt aatttgtttt gcaaccgggg aaagaaacaa tcagaagaat aaaacaacat
      121 aatgttttca cgggcatgat aactatgcgc ggattatttt tcactgcgac agttaggcct
      181 tacacagacg cgtgaacatc atcaatacaa aacgcgtgca tgattttatg aaaggtgaaa
      241 tatcctaaag cttatttttg ttcttcaact caaggacatg caccaaagat taattgcttc
      301 acttattgct gtaaatattt ttcatctttt gaatggacag ccgatcatca caaggcaaat
      361 agacgcaggc ggcagcagca gcgataattt tagatctatt gaaatcacca cggatggcgg
      421 attcatagcc ggcggatttt ccaattcagg catatcggga gaaaaaacgc aggccagccg
      481 gggcggcaaa gattattggg taattaagta tgataggcag ggaataaaac aatgggacaa
      541 aacgattggt ggaagcgcag acgatgaatt gtattcagtt ttgcaaacga atgatggagg
      601 ttatctgctg ggcggattgt catggtctaa catttccggt gagaaaacac agaagagcaa
      661 agggtactgt gattactgga ttgtaaaagt cgattccttt ggaaccattc aatgggataa
      721 aacgatcggc ggtaccgaca ttgagtttct tacttctatg tgcaaaacca gtgatggagg
      781 ctatcttttg ggcggcatgt ctttatccaa tgcaggcttc gacaaaactg agaattgccg
      841 tggaggatat gattactggg tagtaaagat cggccgcaaa ggcaaaatag attgggacaa
      901 gacgatgggt ggctcacaat atgaatatct gacttctgtg aaacaaacga gagacagtgg
      961 cattatcatt ggcggacgat cgttttctaa tgcttccggt gaaaagtcgc aaaatagccg
     1021 gggtgcagga gattactgga tcgtgaagct gaataacctg catgaaaagg aatgggacaa
     1081 gaccatagga ggatcgcaga atgaatttcc cggcaatgtg attcaaatgc cggacgatgg
     1141 atatataatt tgtggaagtt cagaatccgg tgtctcaggc gagaaaagcg actcgtcaag
     1201 aggatattca gattactgga tagtaaaaat aaacaagaga ggaactgtac gatggaacaa
     1261 aacgatcggc ggctccgacc tggactatgc acagtcggtc caatttacga aagatagctt
     1321 tctgattatt ggcggatact cttattccgg tttgtctgga gagaaatccg aaaacatgag
     1381 aggtctgagc gattactgga tcattaaatt aaacacgaag ggccaactat tatgggacaa
     1441 aaccataggc ggatcttcat acgatgagtc tgtggtgatt aaagaaacgg gtgctaacaa
     1501 gtatatgatc ggtgggacct cgtcgtcgat tgccgattac gataaaacgc agaattcaag
     1561 gggcgaggaa gatttctgga tcgtaaatat ccaggaaagc ggattactaa aacatcctat
     1621 tgcaacgacg attggtgaat cgttcccatc aaattcacta aaagcggtta gctctttaaa
     1681 attatttcca actgtggcaa cgtcgattgt gaacgtagaa gcagagggtc ttacagttgt
     1741 ttcagttttt gatagacacg gacgaatgct cttgagaaga actattaatg gtgcgagccg
     1801 gcttaacgtg tctggtttgg taccgggcgt ttactacctg aaaaacgagc aaacaaatgc
     1861 cgtcgcaagg ttcataattg aaaggtaata ctgcgatgaa atggatctat gcgatgatct
     1921 cttcaatcac ttttccggaa acatcagtta gcctgaacgg cctgccctgg aattgataag
     1981 tgaatttttc atgattgaat cctagctgat tcaatatcgt cgcctgtata tcaaatgcgg
     2041 tgacttttcc gttgatggga taatatccga tctcatccgt ttctccataa ctcacgcctt
     2101 tcctcatgcc accgcccgcc atccatatag tgaaagcgtc tacgtgatga tctcttcctt
     2161 tgaaaggatt ttgtttgcct tcgcggttct ccatcatcgg cgttcggcca aattctccgc
     2221 cccagatcac caaagtttct tcaagcaagc cgcgttgttt cagatcaaga atgagtgcgg
     2281 taaccgactt gtctatctgc ctgcatttat tgataaaacc aatatcgatc gcgagatttt
     2341 catccgtgcc atgactgtcc cagccccaat caaataattg cacaaaacga acacctttct
     2401 caaccaactt tcttgcaagc aaaacattat tggcaaaaca tgcctggccg ggttttgttc
     2461 catacatgtc gtgaatgtac tgcggctcgt cgttgatgtt catgacctcg ggcgctgcga
     2521 tctgcatgcg atacgccatc tcatattgag aaatgcgcga caatatttcc ggatcattgt
     2581 actctttata ttcctgctca ttcacttcat tgatcgcgtc aatggatgcc ttgcgcaggt
     2641 cgcggtccat tccatccgga tctttgataa ataacaccgg gtcaccaacg cttctgcatt
     2701 gcaccccctg gtaaacgctt ggtaaaaatc cgctccccca aacgctttta ccagcgtcag
     2761 gaaattttcc gccgctggtg agcacaacaa accccggtaa attctggttc tctgttccta
     2821 aaccataagt cacccatgag ccaaggctcg gccttcctaa acgcggggca ccggtgtgca
     2881 ccagtaactg cgccggcgca tgattgaact gatcggttgt gcatgctttc aaaaaactaa
     2941 gttcatctgc gatcgtcgca agatgtggca tgttctcgct gacccatgcg ccgctttctc
     3001 catgctgcga aaacttcgct tgcggaccaa gcatctttgg aattccgcgt atgaacgcaa
     3061 aacgcttccc ttcaacgagt gaaggtggac acagctgccc gtccaatttg gcgagttcag
     3121 gtttataatc gaaaagctca agttgcgacg gcgcgcctgc catgtgcaaa tagataacat
     3181 tctttgctct tgcag
//
LOCUS       DASQJI010000268         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1871976,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000268 DASQJI010000000
VERSION     DASQJI010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1871976"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1582
                     /locus_tag="VEV83_07535"
     CDS             <1..1582
                     /locus_tag="VEV83_07535"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HYK45002.1"
                     /translation="LKGSLLLASDSNFYGMTSAGGSNGSGTIFKITPAGNFTVLKNLQ
                     NTTDGSAPLGSLIQAKDGYLYGMTSAGGTYAGGTIFKISTTGTFTVLKHFSPNTDGGY
                     PEGDLVEGSDGFLYGMNKTRIFKISTAGAYTVLRTLNAGTDGSNPLGNLVVGTDGNFY
                     GMASGGGKYNAGTIFKITPAGNFTTLTNLHPDTTGSVPKGSLVVGSDGNFYGMTSAGG
                     SLKAGTIFKVTPAGNVTVLRNLSLTTDGGSAFGSLIVQKNLVLVANAQSMTTNEDTAK
                     VITLTGSGASPLVYTIITPPKKGKLTGTAPNITYKPNANFYGKDSFYFTVTYGCVSSA
                     PAKVSIKINSINDAPVLAPIGDKSVVVNNNLSFTATATDVDKGSVLTYSLIGAPAGAG
                     IGATSGVFSWTPTAQGSFTFTVRVTDNGVPSLYDEEKITVTVTQGFNAMIEGLPQTHA
                     TIFPNPVRDRFKVSMPQQTGNLVLQIVGAAGNIITTNKYNGANNVIEVDASKLAAGAY
                     VLIIETELGKESLKFIKL"
BASE COUNT          660 a          502 c          574 g          599 t
ORIGIN      
        1 gttgaaagga agtttgcttc tcgcatccga tagtaatttt tatggaatga catcagcggg
       61 cggatcaaac ggttcaggca ctatttttaa gatcactcct gcaggaaact tcacggtctt
      121 gaaaaatctc caaaacacaa ctgatggcag cgctcctctc ggcagtttga tccaggcaaa
      181 agacggttac ctgtatggta tgacgagcgc aggcggcacg tatgcgggcg gaacaatttt
      241 caaaatttca acgacaggta cattcaccgt gctaaaacat ttttcaccaa acacagacgg
      301 tggttatccc gaaggtgatc tcgtggaagg cagcgatggt tttttatacg gaatgaacaa
      361 aacgcgcatc ttcaaaattt caacggccgg cgcgtacaca gttttaagaa cattgaatgc
      421 agggactgat ggcagtaacc ctttaggcaa tttggtcgtt ggcaccgacg gaaattttta
      481 tggaatggca agcggtggcg ggaaatataa tgcaggaacg attttcaaga tcacacctgc
      541 aggaaatttc acaacgctca ccaacctgca tcccgatacg acaggcagtg ttcccaaagg
      601 cagtcttgtg gtcggcagcg acggaaattt ttatggaatg acaagcgccg gcggaagttt
      661 gaaagcagga actattttta aggtcacgcc tgcaggcaat gtcactgtgc ttcgaaatct
      721 cagtcttaca accgatggtg gttctgcgtt tggcagtttg atcgtgcaga aaaatcttgt
      781 gcttgtcgcg aatgcgcaaa gcatgacgac caatgaagac accgcaaagg ttattacgtt
      841 aaccggcagt ggcgcgtctc cgctcgtata cacgatcatt acgccgccga aaaaaggtaa
      901 gttaaccggt accgcgccga atatcacgta caagcccaat gcaaattttt atggcaaaga
      961 ttcattctat ttcacggtga cttatggatg cgtctcgtct gcgcctgcaa aggtgagcat
     1021 taaaataaat tctataaatg atgcaccggt gctcgcgccc attggcgaca aatctgtggt
     1081 ggtgaataat aatttgtcgt tcaccgcaac ggccaccgat gttgacaaag gttcggtgct
     1141 tacttactcg ctcattggtg cgcccgcagg tgcaggcatt ggcgcgactt ccggtgtgtt
     1201 ctcgtggacg ccaacggccc agggttcgtt tacctttacc gtgcgtgtta ccgacaatgg
     1261 tgtgccgagt ttatacgacg aggaaaaaat aacggtcacc gtaacgcagg gcttcaatgc
     1321 aatgatcgaa ggtctcccgc aaacgcatgc gactattttt ccgaatcctg ttagagatcg
     1381 ttttaaggta tcgatgccgc agcaaacagg aaatcttgtt ttacaaattg tgggcgcagc
     1441 cggaaacatt attaccacga acaaatacaa tggtgcaaac aatgtgattg aagtggatgc
     1501 ttcaaaattg gcggcaggag catatgtgtt gataatagaa acagaactgg gaaaagaaag
     1561 tttgaagttt ataaagttgt aggtagtaac gtgagagtgc agagcggcga tcgggaggtt
     1621 gccgcttttt tgttttgaat atagctcctt cgctacaaaa ccttaaataa aatcgtacat
     1681 ggcgcatgat gttcgaggtt tgatgtttga cgttcgacgg tcgctagcat ttcatatttt
     1741 cgtcacttct catgtatcaa tgccgacaac atcttctcaa ggaaatagaa tgcacttgaa
     1801 atagtttacc gggaattcgt tgacgttcat ggcatttgcg gaacgcgttt cgtaaattta
     1861 cgtgttgtcc atccccatac taacacacat tggaaaatat aaagtactac ataggcacga
     1921 cagatttcag ctggtacagt tatttaagac aactagaccc ggaagatgta atttttggca
     1981 gccggaggaa aaacaaattt tgaactcatt ggtgcaggcg cgccgttcct tttcaaattg
     2041 cccggtgagg gtttgtgcgt cggactgcgc cggacttgca atgaaaagcc cgaaccacag
     2101 ttgatatttg aactggaggc tgacagctct aaagtccaga aagaaaaaaa cttgaaggag
     2161 tctaagattc acatcgctta tccaagagcg taaagtgcag tgggaccggt gactatccgg
     2221 actaaggcag tggcatatac ccttcaagat tagcaaactt aaaaagctct ctcgtgatga
     2281 tgctgcaatt ctctgccaac tccgggaggg tgcaagactt aaccttgaga ttttt
//
LOCUS       DASQJI010000269         1544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1411701,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000269 DASQJI010000000
VERSION     DASQJI010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411701"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..614)
                     /gene="bioB"
                     /locus_tag="VEV83_07540"
     CDS             complement(<1..614)
                     /gene="bioB"
                     /locus_tag="VEV83_07540"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HYK45003.1"
                     /translation="MHTAIRNNWSLDEVHSIYETPLLELILRAANVHKQHNDTAEVQV
                     CTLLSIKTGGCTEDCAYCPQAARYNTGVQVHALMQKDEVLSYAQKAKQAGSTRFCMGA
                     AWREVRDNKDFDRVVDMVKGVNDLGMEVCCTLGMLSDQQAQKLADAGLYAYNHNLDTS
                     ADYYGEIITTRTYDDRLQTLEHVRKAGVTVCCGGIIGLGETHDDR"
     gene            766..1176
                     /locus_tag="VEV83_07545"
     CDS             766..1176
                     /locus_tag="VEV83_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5684 domain-containing protein"
                     /protein_id="HYK45004.1"
                     /translation="MASLFLTFWIIICLVFVVIAIAGAWKAFEKANQPGWACIIPIYN
                     SYIMLKIGGKPGWWLLLYFIPGVNVVFAIWTMNMISKSFGKDEGFTVGLLFLGFIFWP
                     ILGFGDAVYQGPFGDPEAYRAYQERFAVKDGSLL"
     gene            complement(1258..>1544)
                     /locus_tag="VEV83_07550"
     CDS             complement(1258..>1544)
                     /locus_tag="VEV83_07550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45005.1"
                     /translation="TFYDNLIGAPTDQRKNVYCYWPRDYQQKINLSYVTDYNYKLYDS
                     LNGGKFYNIRLDKYEKSPIPDNQLTAKEQKIKGQFKKEIDKGLVGWDANH"
BASE COUNT          375 a          348 c          344 g          477 t
ORIGIN      
        1 cgatcgtcgt gcgtttcgcc aagcccgata atgccaccgc agcacacagt gacgccggct
       61 ttacgcacat gttccagcgt ctgcaaacga tcgtcgtatg ttcttgtggt aatgatttca
      121 ccgtaatagt ctgctgatgt atcaaggttg tggttatatg catacaaacc cgcgtcagct
      181 aatttttgcg cttgctgatc actgagcatg cccaacgtac aacatacttc catgcccagg
      241 tcattcacgc ctttcaccat atcaaccacc cgatcaaaat ctttattgtc tctcacttcc
      301 cgccaggcgg cgcccataca aaacctggta ctgcctgcct gttttgcttt ttgcgcataa
      361 ctcagcactt catccttttg catcagggca tgaacctgta cgcctgtgtt gtatcgtgct
      421 gcctgcgggc aataggcgca atcttcagtg cagccacctg tttttatgct gagcaatgta
      481 catacctgca cttctgcggt gtcgttgtgt tgcttgtgca cgtttgctgc tcgcaagatc
      541 aattcgagca aaggtgtttc atagatgcta tgaacttcat cgagtgacca gttattgcgg
      601 atggcagtgt gcatacaaat cattttcaag gaacaaaaat agggaagtga ttttattgtg
      661 aggctgttac gttgctgctc gcgtagaggc atcaaataat cttttataca atatagctgg
      721 agcggagaaa aatttatatt tacaaacaat taaaactaac tctgtatggc ttccttattt
      781 cttactttct ggatcatcat ttgtctcgta tttgttgtca ttgcgatcgc cggtgcatgg
      841 aaggcttttg aaaaagcaaa tcaaccgggt tgggcatgca tcattccaat ttacaattca
      901 tatatcatgt tgaagatcgg cggtaaaccg ggctggtggt tgctgctata tttcataccc
      961 ggagtgaacg tggtatttgc aatatggacg atgaacatga tctctaaaag tttcggaaag
     1021 gacgagggtt tcaccgttgg tttattattc ctcggtttca ttttttggcc tatcctgggc
     1081 tttggcgatg cggtttacca gggacctttt ggcgaccccg aagcataccg tgcttaccag
     1141 gaacggtttg cggtaaaaga tggcagtttg ttatgaatag attcccggaa tgtttccagg
     1201 gtacagactg aaaaaaataa tggccaaaaa gaatcgagta gcgaacgcaa tcccgtatca
     1261 atgattcgca tcccatccca cgagaccttt atcaatttcc tttttaaact gaccttttat
     1321 cttctgttcc ttcgctgtaa gctggttgtc agggatcggt gacttttcat atttatccag
     1381 tctaatgtta taaaacttcc cgccgttcag gctgtcatag agcttatagt tgtaatcagt
     1441 cacgtagctg agattgatct tttgttgata gtcgcgcggc cagtagcaat agacattttt
     1501 tctttggtcc gtcggcgcac caatcaggtt atcgtagaag gtag
//
LOCUS       DASQJI010000270         9018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_28622,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000270 DASQJI010000000
VERSION     DASQJI010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9018
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28622"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..798)
                     /locus_tag="VEV83_07555"
     CDS             complement(<1..798)
                     /locus_tag="VEV83_07555"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HYK45006.1"
                     /translation="MNRKILYLFNPISGTTRKDALLNKIEAATKARNFQFEFIKTNSS
                     GDYELLKRKIKAEKFTDVVIIGGDGTVNQVTAALRGCAVRFGIIPRGSGNGLAFTAGI
                     RKNLAQALEIIFKGDSKPIDAYMVNDHYACMLCGLGLDASVAEKFSMQRRRGLVTYTQ
                     QSVIQFFQASPYRFEMVLGDFSFFTDAYFISIANSNQFGNNVTIAPQASLSDGLLDIV
                     VVQGMSKVMLPLAVLRQIQGNNRLQELAEDISNNTVIYFQASELIVKN"
     gene            complement(833..1519)
                     /locus_tag="VEV83_07560"
     CDS             complement(833..1519)
                     /locus_tag="VEV83_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK45007.1"
                     /translation="MKRIIIVCFVFLTVIRSFSQEDYSKHPNTSSDGWTNLFNDDLSN
                     AIYDKDVWTVTGGVLTASKDDAIWSEKAYDNFVLDLEFKNAEGTNSGVIVHATDIKEW
                     IPHSVEIQIADDYSDEWSKASPTWQCAAIFGHQAATKRTVKKPGEWNHYTITCKGTKI
                     WVVLNGELVNECDMSLYTSAKTNPDGTEIPAWLSNPMATLQLHGHIGFQGKHAGAPIW
                     FRNIKIRELN"
     gene            complement(1671..2585)
                     /locus_tag="VEV83_07565"
     CDS             complement(1671..2585)
                     /locus_tag="VEV83_07565"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HYK45008.1"
                     /translation="MTKTVCSFSAILFLLVFFTSLQHLSAQSTTPSGLVYTIFPGSGG
                     EKAKAGDFVKFNLKYTIGDKDTVLQSTFGKIPEYSAVDTGKDSEFSFMEIIPKLSAGD
                     SAEIMISVDSLKNRNIIADYDLIFTKGSNLKCRLRLMQIFKLESDVDSDYRKELEREK
                     SREIKDIEIYIKGKGIKAVQKTKNGAYVLVENPGDITLKADSGKVATIKYKGYFFDGT
                     VFDTNMDSSTGSAEPIEVPVGNGKVMQGWDEALPYFGKGGKGKIFIPAMLAYGPQGSA
                     PVIPPYSNLIFDIQILDVKDESPSDSDQ"
     gene            complement(2917..3780)
                     /locus_tag="VEV83_07570"
     CDS             complement(2917..3780)
                     /locus_tag="VEV83_07570"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK45009.1"
                     /translation="MQQFKHTFRSYLSLRITDNNFPFEVTMRAAFLIFLSSFVLGAGA
                     QTRLDPDFARPPDDSLPLTKKHPVIKPATIAAGYVAITCLAYRYGDEEVEEFSQANQN
                     KVVYSGFQTVGYLGLGNASIAITVGTGITAMVTQNERLKKATLLLIGGHLINDVVTNE
                     LKVSFQRHRPNTGDPYNTFDWREGSKANESFASSHTSNAFTTATVFALCFPNKKWVPI
                     AAYSTASLVGLSRIYQNAHWTSDVLVGAAVGFLSAHAMNKLYNLAGKRLTFLPDVENS
                     HFGAAVVYTLK"
     gene            complement(3850..4203)
                     /locus_tag="VEV83_07575"
     CDS             complement(3850..4203)
                     /locus_tag="VEV83_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HYK45010.1"
                     /translation="MNVETLREYCLAKRSVTEGFPFGETVLVFKVMDKIFLLVSLDAS
                     PLQFNAKCEPSKAIELREEYSAIEPGYHMNKQHWNTVIVDGTVPVKLLKQMIDDSYDL
                     VVQSLPKKLREGLLK"
     gene            complement(4301..7984)
                     /gene="dnaE"
                     /locus_tag="VEV83_07580"
     CDS             complement(4301..7984)
                     /gene="dnaE"
                     /locus_tag="VEV83_07580"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HYK45011.1"
                     /translation="MLFSHLHVHTQYSLLDGAASIESLYKKAAKYGMPAVAITDHGNM
                     FGAFEFVKQAWNNTRVVGVDANGKEIKEPVIKPIVGCEFYVVADRHRKTFSKEQKDDR
                     YHQVLLAKNRAGYQNLIKLTSLGFIEGYYSKYPRIDKELIEKYHEGIIATTCCIGAYV
                     PQTILHKSEAEAEKEFEWWYNLFGDDYFIELQRHNIIEQEKINSTLLKFAKKYNVPVI
                     ATNDSHYTEKEDYNAHDILLCINTGEKQSTPGYDDFVNDDIHLKNRRFKFPNDQFYFK
                     SPEEMLQTFDDLPHALDNTNIIVDRIETLDLKKDILLPAFPVPKAFQTSDDSNINQWN
                     YLHHLTYEGARERYGEISEELRERLDFELFTIKTMGFAGYFLIVSDFIKVGRERGVFI
                     GPGRGSAAGSVVAYSIGITNIDPIKYNLLFERFLNPDRKTMPDIDTDFDDEGRQKVID
                     YVVEKYGKHQVAQIITYGTMAAKMSIKDVARVMDLPLPESNALTKMVPERIGTSLKHI
                     LHAPFTTKEAKAEDSTDISLEERGYGPDEIENLRKLRDIYKSGDMRAQVLKEAERLEG
                     GVRNTGIHAAGVIIAPRDLTELIPVATSKDSDLWVTQIEGSTIEEAGVLKMDFLGLKT
                     LSILKTALEIINENHGINIDLDTLPLDDQKTFELYQRGETNGTFQFESAGMQKYLREL
                     KPDQFGDLIAMNALYRPGPMAYIPHYVARKHGREAVSYDLPEMQEHLEETYGITVYQE
                     QVMLLSQKLAGFTKGQADVLRKAMGKKDRKTLDKMKDSFIQGAAAKEFSKEVLEKIWH
                     DWEAFAQYAFNKSHSTCYALVAYQTAYLKAHYPGEYMSAVLNHAGSIDKITFYMEECK
                     RMGLKVLGPDINESLKGFAVNAKGEIRFGLGGLKGVGEAAIESIIAERKNNGAYKNVF
                     DFIKRVNQRTVNKKSIESLANSGAFDCFPEHHRAQYFFAHTNDNVTGIERIIRFGNLF
                     QSNKLSGTNNLFGDSILPEIAPPFLPKCNEWTLTEKLEREKEITGIFISGHPLDHFKF
                     ELRYYGIMNLADFNDIKESLTLASANKDKNLRIAGLVIDAQHRISRNGKNFGSMTIED
                     FSGKTELMLWSDEYVKFKNYLEKGNNLLISGTFRQRYNGDDYEFKATSINLLETAKVN
                     LTKQLEIAVEPASLTSEFVNFLSNNVRSNPGKSSLKFRIKEPQENLEVILSSTEKGFA
                     MNEELADFLLDNPDVEVNVGLVN"
     gene            8313..>9018
                     /locus_tag="VEV83_07585"
     CDS             8313..>9018
                     /locus_tag="VEV83_07585"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HYK45012.1"
                     /translation="MNSRFVQTLCLLLLLSSCKSLQLASKKDADQPTASRKKNSQFID
                     GVSMTPGDQKTADYKAGKSTQPGSNKYAGNSSSFNIEKADWLQIKYAIMTDMPVEQLN
                     NLPLLQQIDHWWGTRYCMGGDDEHCIDCSAFTQTMERSVYGVQIPRTAHEQYNFSTHI
                     DDTELKEGDLVFFRTGNYISHVGLYVGNYKFVHASTSGGVTITDLNDAYWSKKYAGAG
                     RVLNPSPSPQAEKGVVG"
BASE COUNT         2353 a         2042 c         1895 g         2728 t
ORIGIN      
        1 attttttacg atgagttcag aagcctggaa ataaataaca gtattatttg aaatgtcctc
       61 tgcaagttct tgcagccggt tgttgccttg tatttgcctg agaacggcca atggtaacat
      121 aaccttgctc attccctgga caacgacaat gtcaagcaaa ccgtcgctaa ggctcgcctg
      181 cggtgcgatc gtcacattgt tgccgaactg gttgctgttg gctatgctga tgaaatacgc
      241 gtcggtgaaa aaagagaaat cgccgagaac catctcaaac cggtacggcg acgcctggaa
      301 aaactgaatg acactttgtt gggtataggt tacgagtccg cgtcttcgct gcatggaaaa
      361 cttttcggcg accgatgcat ccaggcccag gccacaaagc atgcacgcgt agtgatcgtt
      421 caccatatat gcatcgatcg gttttgagtc gcccttaaag attatttcga gcgcttgcgc
      481 caggttttta cggatccccg ctgtaaaggc aagcccgttg ccactgccgc gcggtatgat
      541 cccgaatctt accgcacatc cgcgaagcgc ggccgtcacc tggttcacag tgccatctcc
      601 accgatgatg acaacatcgg taaatttttc agctttgatt ttccttttca gcaattcgta
      661 atcgccgctc gaatttgtct tgataaattc gaattgaaag ttccttgctt ttgttgcggc
      721 ttcaattttg ttgagcagcg catcctttct tgttgtaccg gatattgggt tgaagagata
      781 gagtattttt cggttcattt cttaattgaa tcctggccaa cgatcgaaca ccttagttca
      841 attccctgat cttgatattc ctgaaccaga tgggagcacc cgcatgcttt ccctggaaac
      901 cgatgtgccc atggagttgt agtgttgcca tcgggttact gagccacgct gggatttcgg
      961 ttccatcagg atttgttttc gctgatgtgt acaaactcat gtcgcattca tttaccagtt
     1021 caccgtttag tacgacccaa atttttgtgc ctttgcaagt gatcgtatag tgattccatt
     1081 cgcctggttt ttttacggtt cgttttgttg cagcctggtg cccgaatatt gcggcacatt
     1141 gccaggtggg agaggccttg ctccattcgt cggaataatc gtcagcgatc tggatctcca
     1201 cggaatgcgg tatccattct ttgatgtcgg tcgcatgcac gataacaccg ctgtttgtcc
     1261 cctctgcgtt tttaaattca agatcgagaa caaaattatc gtatgccttt tcactccaga
     1321 tggcatcgtc tttagaagca gtcagcacgc cgcctgttac ggtccaaaca tctttatcgt
     1381 agatggcatt cgagagatca tcattaaaaa gatttgtcca gccgtccgat gaagtgtttg
     1441 gatgtttgga gtaatcttct tgtgagaacg aacggatcac ggttaaaaaa acgaaacaaa
     1501 cgattattat tcttttcatg agcaagtatt gagcaggtta aagatagcat gatttccatc
     1561 gaacactctt tagaacgtgc aggatgttga gaatcctgga tgtcttactt tttgttttat
     1621 ttaattgcgt gcctgtcggc gtccgtcacc aaaaaactct ttcgttaagt ttattgatca
     1681 ctgtcactcg gagactcatc ctttacatcg aggatttgaa tgtcaaatat caggttggaa
     1741 taaggcggga tcacaggagc gcttccctgc ggtccatagg cgagcattgc aggaataaag
     1801 attttccctt tgccgccttt gccaaaatac ggtaacgcct cgtcccatcc ctgcataact
     1861 tttccattgc ctacaggaac ttcgattggt tctgcactgc ctgttgaact atccatattt
     1921 gtgtcgaaaa ctgttccgtc aaaaaaatac cccttatact ttattgtggc aactttaccc
     1981 gaatcagctt taagcgttat atcacccgga ttctcgacca gaacataagc accgtttttt
     2041 gttttttgca cagctttgat gccctttccc ttgatatata tttctatatc ttttatttcc
     2101 ctgctctttt cccgttcaag ttcctttcgg tagtctgaat ccacatcact ttctaattta
     2161 aatatttgca ttagtcttaa tcgacactta agattgcttc ctttcgtaaa gatcaaatca
     2221 taatcagcaa ttatgtttct attttttaaa gagtccacac tgatcataat ttcggcgctg
     2281 tctcccgcac ttaattttgg aattatttcc atgaacgaga attcactgtc tttgcctgta
     2341 tccactgcgg agtattcagg gatcttacca aatgttgact gaagaacggt gtctttgtcg
     2401 ccaattgtgt acttcaaatt aaacttgaca aagtctcctg cctttgcctt ttcgccacca
     2461 ctacccggaa aaattgtgta cactaatccg gaaggagtcg ttgactgtgc agacaggtgt
     2521 tgaagggatg taaaaaaaac aagtaaaaaa aggattgcgc tgaatgaaca aacggtttta
     2581 gtcatattgc tttgttgtga aaaaatctcg tcgaaaccgg gctgtcaaaa aacgaaacaa
     2641 agcattttct ctttatgatg aagaaatatt tatgaaagct aaagataaga tcgattaaag
     2701 ataagatcga ttttttataa acactgaaaa tgatccgatg ctgcgccgat gtgcatcaaa
     2761 cgcctattct tttgaccggc agtgaagtca gaatgagcgc gaacaataaa ctttgaatga
     2821 atgactcttg taatgccgga tggacaatca caagtgtatg tctgcaacct ggttgtacct
     2881 gcatgaaccc gttacgaggt gactcgttca atgttttcat ttcaacgtat aaacaaccgc
     2941 agcgccgaaa tgcgaatttt ccacatcagg aagaaaagta agtctcttac ccgccaaatt
     3001 gtaaagcttg ttcatcgcat gtgcacttaa gaaaccaact gcagcgccaa caagcacatc
     3061 ggatgtccaa tgagcatttt gatatatcct ggataagcca acaagtgaag cagtggaata
     3121 cgctgctatc ggcacccatt tcttgtttgg gaaacagagc gcaaaaacag tagcggttgt
     3181 aaacgcattt gaagtgtgcg aagacgcaaa tgattcattc gcttttgatc cttcccgcca
     3241 gtcaaacgtg ttgtatggat cgccggtgtt aggtctgtgt cgctggaaac ttacttttag
     3301 ctcgtttgtt acaacatcat tgattaaatg tccgcctatt aagagcagcg ttgctttttt
     3361 taatcgttcg ttctgtgtaa ccattgcagt aattcctgtg ccgaccgtta tcgcgatgct
     3421 tgcatttcca agacccaggt agccaaccgt ttgaaatccg ctgtagacaa ctttattttg
     3481 attggcttga ctgaactctt ccacttcttc gtcgccgtaa cggtatgcta aacatgtaat
     3541 agccacgtaa ccggcagcta ttgttgccgg tttaattacc ggatgttttt ttgttaacgg
     3601 cagagaatca tccggtggcc tcgcgaaatc cggatcgaga cgggtttgag cacctgcacc
     3661 gagaacgaat gaggaaagaa atattaagaa agcggctctc atcgtcactt caaaagggaa
     3721 attattatcc gtgattctta acgaaagata cgacctaaaa gtatgtttga attgttgcac
     3781 aagctaaatc tttgtcctga agtaaacgac agtggtgaaa tgatccgcat ttgcaagctt
     3841 cagtgtgcac tacttcaata atccttcccg taattttttt ggcaacgact gtacaacaag
     3901 atcgtaagaa tcatcgatca tttgtttgag cagcttaacg ggaaccgtgc catcgacaat
     3961 aacggtgttc cagtgttgtt tgttcatgtg atagcccggc tcaatggcgc tatattcttc
     4021 acgtaattcg atcgcttttg aaggttcgca ttttgcattg aactgcaaag ggcttgcatc
     4081 gagggacacc aatagaaaga tcttgtccat caccttaaaa accaatacgg tttcgccgaa
     4141 aggaaatcct tcggtaacgg atctttttgc gaggcaatat tcacgaagcg tttctacgtt
     4201 cactcattaa aatatctgca tgacaaaaac tggaatagtt gccggcgcca ttcattctac
     4261 cggaggcacc attttcaaga ttttcaaatt accatattgg ctaattaacc aaccccacat
     4321 tcacttccac gtctggattg tctaataaaa agtccgccag ttcctcattc atggcaaagc
     4381 ctttttcggt gctgcttaaa atgacctcca aattttcctg cggctccttg atgcggaatt
     4441 tgagcgacga ctttccagga ttagaacgca cattattgct caaaaaattt acgaactcag
     4501 atgtgagaga cgcaggctcg acagcgattt cgagctgctt tgtcaaattc acctttgctg
     4561 tttccaacag gttaattgag gtggctttga attcatagtc atcgccgttg tatcgttgac
     4621 gaaaagttcc tgagatcaac aaattgtttc ctttttccag atagttcttg aattttacat
     4681 attcatcact ccacaacatc aattccgttt tgccactaaa atcttcgatg gtcatcgatc
     4741 caaaattttt tccattgcgc gagatccggt gctgtgcatc gatcaccaaa cccgcaatgc
     4801 gcaaattctt gtccttgttt gcggaagcaa gagtgagcga ttccttgata tcattgaaat
     4861 cagcaaggtt catgatcccg taatatcgaa gctcaaattt gaaatgatct aacggatggc
     4921 cgctgatgaa gatgccggta atttcttttt cacgttcaag cttttcagtc aaagtccatt
     4981 cattgcattt tggcaaaaat ggcggggcga tctccggcaa aatagaatcg ccaaacaaat
     5041 tattcgtgcc ggagagtttg ttgctctgaa ataaatttcc aaagcggata atgcgctcga
     5101 tgccggttac attgtcattc gtgtgcgcaa agaaatattg tgcacgatga tgctcaggaa
     5161 aacaatcgaa cgcaccagaa ttagcaaggc tttcgattga tttcttattc acagttcttt
     5221 ggttaacgcg cttgatgaaa tcaaaaacat ttttgtacgc gccgttattt tttctttctg
     5281 caatgatgct ttcgatcgca gcttcaccaa cacctttcaa tccgccgagg ccaaaacgta
     5341 tctcgccctt tgcattcacc gcgaaacctt tcagcgattc atttatgtcg gggccaagca
     5401 ccttcaatcc catgcgtttg cattcctcca tataaaacgt gatcttatca atactgcccg
     5461 cgtgattaag cacggcagac atatactcac ccgggtaatg cgctttcagg taagcggtct
     5521 ggtacgcgac cagcgcataa caggtagaat gtgatttgtt gaatgcgtat tgagcaaatg
     5581 cttcccagtc gtgccagatc ttttcaagga cctctttcga aaattcttta gccgctgcac
     5641 cttgaataaa gctgtccttc attttgtcaa gcgtcttccg gtctttcttc cccatcgctt
     5701 tacgcaacac atctgcctgt cccttcgtga agccggcaag cttttgcgaa agcagcatca
     5761 cctgttcctg gtaaacagtg atgccatagg tttcttcgag gtgctcctgc atttcgggaa
     5821 gatcatagct cactgcttcc cgtccatgct tccgtgcgac atagtgcggg atgtaagcca
     5881 taggcccggg acgatagagc gcattcatcg cgatgagatc gccgaactgg tccggcttta
     5941 gttcacgcaa atatttttgc atgcccgcac tttcaaactg gaacgtgccg tttgtttccc
     6001 cacgttggta taattcgaaa gttttttgat catcaagggg aagggtgtcg aggtctatgt
     6061 tgatgccatg attttcgttg atgatctcaa gagcggtttt taaaatggac aatgttttca
     6121 atccaagaaa atccatcttt aacacaccag cttcttcgat agtgcttcct tcgatttgtg
     6181 taacccaaag atctgaatcc tttgatgtgg caacaggaat taattccgta agatctcttg
     6241 gtgcgatgat cacacctgct gcatgaatac cggtgttgcg aacgccgcct tccagtcgtt
     6301 ccgcttcttt taacacctgg gcgcgcatgt cgccactttt gtagatatcc cggagtttgc
     6361 ggaggttttc aatttcatcc ggaccataac ctctttcctc taacgagata tccgttgaat
     6421 cctccgcttt ggcttctttt gttgtgaatg gtgcatgcaa aatatgttta agtgaggtac
     6481 cgatgcgctc cggcaccatc ttcgtcaacg cgttgctttc cggtaaagga agatccatca
     6541 cacgcgctac atccttaata ctcatcttag cagccatcgt accgtaagta atgatctgag
     6601 cgacctggtg cttcccatat ttttcaacaa cgtagtctat tactttttgc ctgccctcgt
     6661 catcaaaatc agtatcaata tccggcatcg ttttgcggtc aggatttaag aatctttcga
     6721 atagcaggtt gtattttatc gggtcgatat tagttatgcc gatggagtat gccaccacac
     6781 ttccggcggc cgagccgcgt cccgggccaa taaacacacc gcgttctctt ccgaccttaa
     6841 taaaatcgct cacgatcaaa aaatatccgg cgaatcccat ggtcttgatc gtgaacaatt
     6901 caaagtcgag gcgttcgcga agttcttcgc tgatctctcc atagcgttca cgtgcgccct
     6961 cgtatgtaag atggtgcagg tagttccatt ggttgatgtt gctgtcgtcg cttgtttgaa
     7021 atgctttcgg tacggggaat gccggaagaa gaatatcttt tttcagatcg agagtttcaa
     7081 tacgatcaac gatgatgttg gtattatcaa gcgcgtgcgg aagatcatca aaggtttgta
     7141 acatttcttc cggcgactta aagtagaact ggtcgtttgg aaatttaaac ctgcggttct
     7201 ttaaatgaat gtcatcattt acaaagtcgt catagcccgg cgtactttgc ttttcacctg
     7261 tgttgatgca aagcaggata tcgtgtgcgt tgtaatcttc cttttcggta taatgactat
     7321 catttgttgc aatgaccggc acattatatt ttttcgcaaa cttcagtagt gtcgaattta
     7381 tcttttcctg ctcgatgata ttgtgacgct gcagctcaat aaaataatca tcaccaaata
     7441 aattatacca ccattcaaat tctttttccg cttcggcttc gcttttatgc aagatcgtct
     7501 gcggtacata cgcaccgatg cagcatgtgg ttgcaatgat gccttcatga tatttttcga
     7561 taagttcttt gtctattcgc gggtacttgc tgtaatatcc ctcaatgaag cctagtgatg
     7621 tgagcttgat caggttctgg taaccggccc tgttttttgc aagcagcacc tggtgatacc
     7681 gatcgtcttt ctgttcctta gaaaaagttt ttctgtgccg gtctgctact acataaaact
     7741 cacagccgac gatcggtttt ataacgggtt cttttatttc tttaccattc gcatccacac
     7801 caacgacacg tgtattgttc catgcttgtt ttacgaattc gaatgcacca aacatattgc
     7861 cgtggtcggt gatggcaaca gcgggcattc catatttcgc agccttttta tacaggctct
     7921 caattgaggc ggcgccatcg aggagagaat attgcgtgtg tacgtggaga tgagagaaga
     7981 gcatttacga tttaagattt gcgatttaca atttttattg agacgttgaa tttcaaagtg
     8041 tctgtcaatt gcgaactgtc aactgtccac ttgtttggaa caacgctcta ttttcagaac
     8101 catttataat ttacgattta caattttgat tggcacgttg aatcaagatg cctgtcatct
     8161 gtcaactgtc aactgtcaac ttccagacaa cgctcaaatt tcagcaatct tcatcacagg
     8221 acgcgtttgc cttttccaca ttttacataa tgtttaaaat tttagtaaaa aatttccgtt
     8281 cttagcaaaa gatttctcac agcaaacgtc taatgaactc acgatttgta caaacgcttt
     8341 gcctgttgct attgctgagc agttgtaaaa gcttacaact tgcctcaaaa aaagatgctg
     8401 atcaaccgac cgccagccgg aaaaagaatt cgcaatttat tgatggtgta agtatgacac
     8461 ccggcgatca aaaaactgct gattataaag cgggtaaatc aacgcagcct ggcagtaata
     8521 aatatgccgg gaattcctca tcttttaata tcgaaaaggc tgattggctt cagatcaaat
     8581 atgcgatcat gaccgacatg cctgtagagc aattaaacaa tcttccgttg ttgcaacaga
     8641 tcgaccattg gtggggaaca cgttattgca tgggcggtga tgatgaacat tgtattgatt
     8701 gttctgcatt cacacaaaca atggagcgca gcgtatatgg tgtacaaatt ccgcgtacgg
     8761 cacatgaaca atacaatttt tccacgcata tagatgatac cgagttaaaa gaaggtgacc
     8821 tcgttttttt tagaacgggc aattatattt ctcacgttgg cctttatgtg ggcaactaca
     8881 aattcgtgca tgcttcaaca agtggcggtg taacaatcac agatctcaac gatgcgtact
     8941 ggagcaaaaa atatgcggga gccgggaggg tcctcaaccc cagcccttct ccgcaggcgg
     9001 agaagggagt agttggca
//
LOCUS       DASQJI010000271         8241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_489482,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000271 DASQJI010000000
VERSION     DASQJI010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8241
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489482"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VEV83_07590"
     CDS             complement(<1..615)
                     /locus_tag="VEV83_07590"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HYK45013.1"
                     /translation="MTNFESLFKDFSSLRVGVVGDVMLDTYWWGNVERISPEAPVPIV
                     ALHHREQRIGGAGNVALNAVSLGAETSVFSVTGDDADSNILNGLLNKHHINTRYLVKS
                     SDRITTNKIRVMSRNQQMLRIDSEIVNNISSQDEQQLFDNFSGYVQDTAPSVVIFEDY
                     NKGVLTPTLIQSMIQLCKKHEIVTAVDPKRKNFFLYEHVDIFKPN"
     gene            complement(620..2044)
                     /locus_tag="VEV83_07595"
     CDS             complement(620..2044)
                     /locus_tag="VEV83_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK45014.1"
                     /translation="MSETTTSFKPTLSLVDATMVVAGSMIGSGIFIVSADITRNVGSA
                     GWLIAVWAITGFMTITAAVSYGELSGMYPKAGGQYVFLKEAFNPLAGFLYGWSLFAVI
                     QTATIAAVAVAFSKFTAYLIPQVGESNILLDLAFVKVSAAQVLAIALIVFLTYINTKG
                     IKGGKLIQTTFTSAKLLSLLGLTLFGFLLVKNNFWHENWTTGFNAMRTRTMPEGGVAL
                     WEPIRGGVLIGAVAVAMVGSIFSSDAWNNVTFIAGEIKNPKRNIGLSLFLGTLIVTII
                     YISANLMYLYTLPLDQIAFAQNDRVAIPAANHIFGSAGTIVIAVMIMVSTFGCDNGLI
                     LAGARVYYTMATDGLFFKKTAVLNKHAVPGFALWIQCIVASLLCLSGKYGDLLTMVSF
                     VVVIFYVLTIIGIFVLRKKRPEIPRPYKAFAFPVLPVLYIILALAFCIGLVWTSPKYS
                     LWGLAIMLIGIPLYFVAISSKKSS"
     gene            complement(2204..2803)
                     /locus_tag="VEV83_07600"
     CDS             complement(2204..2803)
                     /locus_tag="VEV83_07600"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HYK45015.1"
                     /translation="MNRVLLVLNVVLLLALAYLYYAFFTEVRDPQPRHAQTDSTAKTN
                     IKIAFFDFDTLVKKYEYAKEINEYLQGKNNAMEAKLDRLKKDFSSKLNDYQKRGASLS
                     QMEQTQMQDELGRMQNNLDQQQQSLGQEMQSEYTQKMFDLKTKVQNFLKTYAQQKGYE
                     YVFATSSDENLIFYKDSVRNITSDIVAQLNQQYQETKKK"
     gene            complement(3070..4317)
                     /locus_tag="VEV83_07605"
     CDS             complement(3070..4317)
                     /locus_tag="VEV83_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYK45016.1"
                     /translation="MRNWSGWWIVIVILLIVDWYVFNAIRFLSHNTSDRSRIAIFSGY
                     WLVSLLAVTFILLFPYVQFLQANALLRNYVFAIIVGLFFAKLIACVFFLLDDIRRLIV
                     WLMSKLFPRTGVDFTHETNYISRSNFLSWLGFILGGGLFATLVYGFSNKYNYQVRKIK
                     FAFENLPASFKGMKIVQISDIHSGSFTDKSAVARGVDLVLKQDADLVLFTGDLVNDRA
                     DEMHNYMDLFSKVRAPMGVYSTLGNHDYGDYVSWPSERAKKENLEKLKQTHGELGWRL
                     LMNEHVVLEKNGERIALIGIENWSAFGRFPKYGRMDLAYPGSEKYSFKILMSHDPSHW
                     DAEVRPKYPDIDLMLAGHTHGMQFGVENPYFKWSPVQWFYKEWAGLYENGKQKLYVNR
                     GYGFIGYPGRVGILPEITVIELT"
     gene            4584..5264
                     /locus_tag="VEV83_07610"
     CDS             4584..5264
                     /locus_tag="VEV83_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYK45017.1"
                     /translation="MRLTYYGQSAFSVEIKGKKILFDPFITHNPLAKEIDVNSVEADY
                     IFISHGHGDHTADVINIAKRTGAKCVGAAEVAGWLEKNGIENAHPMNHGAPIEFEFGS
                     VRGVNAIHSSSFPDGSYAGNPMGFVFATAEGNFYFAGDTALTMDMQLIPRWTKLDFAL
                     LPIGGNFTMDPADAIIASDFIQCNKIVGIHYNTFDLIKIDKEKAVSDFEKAGKQLLLP
                     AAGETITV"
     gene            5316..6116
                     /locus_tag="VEV83_07615"
     CDS             5316..6116
                     /locus_tag="VEV83_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYK45018.1"
                     /translation="MARIIGVANQKGGVGKTTTAINLAASLAVLEFKTLLVDADPQAN
                     STTGIGFDLHNITTSLYDCMVNNLEAADVILKTDVPNLDIIPSHIDLVGAEIEMINYP
                     NRELVLKHILEPIRDEYEVIVIDCSPSLGLITVNALVASNSVVIPVQCEFFALEGLGK
                     LLNTIKIVQSRLNTELQIEGILMTMYDGRLRLCNQVVNEVRRHFEDMVFTTIIHRNSK
                     LSEAPSFGKPVILYDSDCKGAVNYLNMAKEVLQKNNMTKMTNEEKILE"
     gene            6175..7095
                     /locus_tag="VEV83_07620"
     CDS             6175..7095
                     /locus_tag="VEV83_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HYK45019.1"
                     /translation="MVKQKEQNKEALGKGIRSLLQHIDSDFKTMTGLKTDVVEAVTHI
                     SRIPLEAILPNPKNPRRDYNEEALQELAASMKEFDIVQPLTVSKLSDGKYQLIAGERR
                     LRAARMAGLKDVPVYIRQANDRELLELALLENLQREDLNAIEIGLSYRRMMDELNYTQ
                     EQVAERMGKERSTITNYIRLLKLPPDIQLAVRNGNLSMGHARALINIDTVDKQIYVYN
                     EIKNKQLSVRQTEELVRRLYRGHVNAVKSSPKPGVHEAYKRIENNLASYFSTKVLLHH
                     NSTGKGSITIEYYSPEELNKILELMNVQAD"
     gene            7099..7749
                     /locus_tag="VEV83_07625"
     CDS             7099..7749
                     /locus_tag="VEV83_07625"
                     /inference="COORDINATES: protein motif:HMM:NF040144.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5683 domain-containing protein"
                     /protein_id="HYK45020.1"
                     /translation="MRLSYFFILVFSVASLRASAQQDSSTKVNNGKEILLDTLKPQKD
                     SASVKLAKNDSLSTVHHDPRKATRRSAILPGWGQAYNHQIWKIPIVYGALAVPASLFV
                     YNNTWYQRTKDAYNILVNGGDTSQIHDQLKGLSAESMQYYRNVFRKNRDYSALFFLLV
                     WGLNVADATVSAHLKDYDIGNDLSLHLEPNFDGKSSSLSMLLTFRSPSKSLLPSSF"
     gene            7924..>8241
                     /locus_tag="VEV83_07630"
     CDS             7924..>8241
                     /locus_tag="VEV83_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HYK45021.1"
                     /translation="MKIALIGYGKMGKAIEETAIDKGDAVALKISSSNKDAFTTESLA
                     PADVAIEFTNPESAVDNIKKCFDANIPVVCGTTGWLQRWDEVVNYCNAKNGTFLYASN
                     FSVG"
BASE COUNT         2425 a         1850 c         1777 g         2189 t
ORIGIN      
        1 gttcggttta aagatgtcaa catgttcata caaaaagaaa ttctttcgtt tcggatcaac
       61 ggcggtaacg atttcatgct tcttgcacag ttggatcatt gactgtataa gagtcggtgt
      121 aagaacgccc ttattataat cttcgaagat cacaacagac ggagcagtgt cctggacgta
      181 accggaaaaa ttgtcaaata actgctgctc atcctgactc gaaatattgt ttacgatctc
      241 tgagtcaatt cgcagcattt gctgattgcg gctcatcacc cggatcttat ttgttgtgat
      301 gcggtcgctg ctcttcacca aatacctggt attaatgtga tgcttgttca acaaaccatt
      361 taaaatattt gaatcggcat catcgcctgt aacactgaac acgcttgttt cggcccccaa
      421 tgaaactgcg tttaaagcga cattgccggc accgccgatc ctttgttccc ggtgatgcaa
      481 tgcaacgata ggtacgggag cctccgggga aatacgctca acatttcccc accaataggt
      541 gtcgagcata acatcgccaa ccacacctac acgtaatgaa gaaaagtcct taaataaact
      601 ttcgaagttt gtcatattat tagctggatt tttttgagct gatcgccaca aaataaagtg
      661 ggataccgat cagcatgatt gccaatcccc acaatgaata ttttggcgag gtccagacca
      721 aaccgataca aaaggccaaa gctaaaataa tatacagcac aggcaaaacc gggaaggcaa
      781 atgccttata cggccttggt atttcaggac gcttttttcg cagcacaaaa atgcctatga
      841 tagtaagcac ataaaatatg accacgacga atgaaaccat cgtaagcagg tcgccatatt
      901 tcccgctcag acaaagaagg gatgccacga tgcattgtat ccaaagagca aatccgggca
      961 cagcatgttt gtttaatacg gccgtcttct taaaaaacaa accatcagtt gccatagtat
     1021 agtaaacacg tgcccccgcg agtataagtc cgttgtcgca gccaaatgta gataccatga
     1081 tcatcacagc aattacaatt gtgccggcgc ttccgaaaat gtgatttgca gccggaatcg
     1141 caacgcgatc attttgcgcg aatgcaattt gatccaacgg cagtgtgtac aggtacatca
     1201 ggttagctga aatgtagatg atggttacga taagcgtgcc gagaaataaa cttaatccaa
     1261 tgttgcgctt tggatttttt atttcacccg caatgaatgt tacattgttc catgcatcac
     1321 tgctaaagat cgatccaacc atggcgacag caactgcccc tatcaacacg ccgcctctta
     1381 ttggttccca taaagcgacg ccgccctcag gcattgttcg agtgcgcatc gcattgaagc
     1441 cggtggtcca gttctcatgc cagaaattat ttttgacaag caggaagccg aacagcgtaa
     1501 gtccaagcaa tgataacaat ttggccgatg taaatgtggt ttgaataagt ttgccgcctt
     1561 taatgccttt cgtattaatg taagtgagaa agacgataag cgcgatagcg agtacttggg
     1621 ccgctgaaac ttttacaaac gcgagatcga gcaaaatatt tgattctccg acctgcggta
     1681 ttaaatatgc cgtgaatttg ctgaacgcta ctgcaaccgc cgcgatcgtt gcggtttgaa
     1741 tcacagcaaa caaactccat ccgtacaaaa aaccagcaag tggattaaag gcttctttca
     1801 aaaaaacata ttgtccgccg gcctttggat acatgccgct caattctccg tagctcacag
     1861 ctgcggttat cgtcatgaac ccggtgattg cccaaactgc gataagccag cctgcactac
     1921 caacgtttcg cgtgatgtca gcgctcacga taaaaatacc tgaaccaatc atgctgcctg
     1981 cgactaccat cgttgcatct acaaggctca acgttggttt gaacgaagtt gttgtttcac
     2041 tcataatgta gtttgttgtt gcatcgcaga tctctcgtca aagtgatggc accgtcgtca
     2101 tttcgaatga cagcgaggaa tctgcaaggc attaaaaatc ccgctcgaaa cgggatttga
     2161 agatagggaa ttatgtatga aacattttga ggcagccggt cccctatttc ttttttgttt
     2221 cctggtattg ttgattcagt tgtgctacga tatcgcttgt aatatttcgc actgagtctt
     2281 tgtaaaaaat cagattttca tcgctactgg tagcaaatac atattcatag cctttttgct
     2341 gagcgtatgt cttcaaaaaa ttctggactt ttgttttaag gtcaaacatc ttttgcgtgt
     2401 actcgctttg catttcctgg cccaggctct gctgctgctg atctaaatta ttttgcatgc
     2461 ggccgagttc atcctgcatt tgcgtttgtt ccatttggga aaggcttgca ccgcgttttt
     2521 gataatcgtt caacttgctg gagaaatctt tttttagcct gtccaattta gcttccatcg
     2581 cgttgttctt gccctgcagg tactcgttta tctctttcgc atactcatat tttttcacca
     2641 gcgtatcaaa atcgaagaag gctattttga tgtttgtctt cgcagtcgaa tcagtttgcg
     2701 cgtgacgagg ttgaggatcc cgcacttccg tgaaaaaagc ataatacaaa tacgccaatg
     2761 ccaacaacaa aaccacattt aaaaccaata aaactctgtt catgccatcc ttttaaaacg
     2821 cggtgaaggt aaaagtaatg gtgagcaaga aattgttaaa tcaaccgctt gtccaatagc
     2881 atgctcctcg ttcttcaaac aaattcttga ttcctgaaat gatgcaattt tttttagcat
     2941 gacaatgttg gtgagtatgc tcgaacacct gtctcgccgg aactatcttt taataatcca
     3001 ctccggcaaa gacgataatc atttgtctaa ttggtccgag gtagtgacta ttgtatagag
     3061 acgaaggttt catgttaact caatcaccgt tatttcgggt agtatgccca ctcttcccgg
     3121 ataaccgatg aagccataac cgcgattcac gtataatttt tgttttccgt tttcataaag
     3181 gcctgcccat tctttataaa accattgaac agggctccac ttgaaatatg gattttctac
     3241 gccgaactgc attccgtgtg tgtgtcctgc gagcatcagg tcaatgtcag gatattttgg
     3301 ccgtacctct gcatcccagt gactcgggtc atgactcatt aagatcttga aagaatattt
     3361 ctcgctgccc ggataggcaa gatccattct accatatttg gggaaacgtc caaatgcgct
     3421 ccagttctca atgccgatca atgcgatccg ctcgccattt ttttcgagta ccacgtgctc
     3481 attcatgaga agacgccaac caagttcgcc atgtgtctgc ttcaatttct ccaggttttc
     3541 ttttttcgca cgctcacttg gccacgaaac ataatcgcca taatcatgat tgcccaatgt
     3601 gctatacacc cccatgggtg cccgcacctt actaaataag tccatgtaat tgtgcatctc
     3661 gtccgcgcgg tcattcacga gatcaccggt gaataagacc aggtctgcat cctgtttcaa
     3721 tacaaggtcc acaccacgcg caacagccga tttatcggta aaactaccgc tgtgtatatc
     3781 gctgatctgc acgatcttca ttcctttgaa agaagccggt agattttcaa atgcaaattt
     3841 tatttttctg acctggtaat tgtatttatt cgagaatcca tataccaaag tagcaaataa
     3901 acctccgccc aaaataaagc cgagccagct caaaaaatta gagcggctta tataatttgt
     3961 ttcgtgggta aagtctacac cggtccttgg aaacaatttc gacatcagcc aaacaataag
     4021 gcggcggata tcatccagca gaaaaaatac gcaggcaata agctttgcga agaataaacc
     4081 tacgatgatc gcaaatacat aatttcttag aagtgcattc gcctggagaa actgcacata
     4141 gggaaacaac agtataaagg tcacagcaag cagcgacacc agccaatagc cggagaaaat
     4201 tgcgatgcgc gaccgatcgc tcgtgttgtg ggaaagaaat cttatcgcgt tgaacacgta
     4261 ccaatctacg atcagaagaa tgacgataac gatccaccac ccgctccagt ttctcataaa
     4321 aaattttaca aagtaaatac tataccgctt acctgctaac cgattattta aaaagatgca
     4381 cgtaaataca ttcgcaactc gtggctgcaa tatgtccggt aagatcgccg ggcgaaatgc
     4441 aatagcaaat tccaacggca gcgcaaccac tgctaataag atgttgataa aaaatccatc
     4501 gtactaaccg caaaaaggta atattgttga aacttgaagg cttaaaaaat tatttttgtg
     4561 ccctttcaat acaatttgag gttatgagac tgacgtatta cggacaatcg gcgttctctg
     4621 ttgaaataaa aggcaaaaag atattgtttg atccattcat cacgcataac ccgcttgcaa
     4681 aagaaattga cgtgaatagt gtagaggcgg attatatttt catctcgcac ggacacggcg
     4741 accatacggc tgatgtaatt aacatcgcga aacgcacagg tgcaaaatgc gttggagccg
     4801 cagaggttgc agggtggctg gagaaaaacg gaatagagaa cgcacaccca atgaaccatg
     4861 gagcgcctat agaatttgag tttggcagtg tacgtggcgt caatgcgatc cattcatctt
     4921 catttcccga cggcagttat gcgggtaacc cgatgggttt tgtgtttgcg acagcagaag
     4981 gaaattttta tttcgccggc gacaccgcat taacgatgga catgcagtta attccccgat
     5041 ggacaaagct tgactttgcg ttattaccca ttggcggcaa ttttacgatg gatcccgccg
     5101 atgcgatcat tgcatctgat ttcatccaat gcaacaagat cgtcggcatt cattataata
     5161 cattcgacct gataaagatc gacaaagaga aagcagtttc agattttgag aaggcaggca
     5221 aacaattgct gttgccggct gcgggcgaaa cgataacggt ttaaccattg caatattagt
     5281 aaacagattt aattaacctg agggcttgag gtgtcatggc aagaataatc ggagttgcaa
     5341 atcaaaaagg cggcgttggc aaaacaacca cagccatcaa cctggctgca agccttgcag
     5401 ttcttgaatt caaaacattg cttgtagacg ccgacccaca ggcgaacagc accacaggca
     5461 ttggcttcga tctgcacaac attacgacaa gcctttatga ctgcatggtg aacaacctcg
     5521 aagctgctga cgtgatcctg aaaacggatg taccaaacct ggatatcatt ccttcgcaca
     5581 ttgaccttgt gggcgccgag atagaaatga tcaattatcc aaaccgcgag cttgtattga
     5641 aacatattct cgaaccgatc cgcgatgaat acgaagtgat cgtgatcgac tgctctcctt
     5701 ctctcggatt gataacggta aatgctctgg ttgcatcgaa cagtgttgta attccggtgc
     5761 agtgtgagtt ctttgcgctc gaaggactgg gcaaattatt gaacacaata aagatcgtgc
     5821 aaagccggct gaatacagaa ttacaaattg agggtatcct aatgacaatg tacgatggcc
     5881 gtttgcgttt atgtaaccag gtagtgaatg aagtgaggcg gcactttgaa gacatggtct
     5941 tcacaacgat cattcatcgc aacagcaaat taagtgaagc accaagtttt ggcaagcctg
     6001 tgatcttgta tgattcagat tgcaagggtg ccgtaaacta tttgaacatg gcaaaggaag
     6061 tgctgcaaaa aaacaatatg acgaagatga ccaacgagga aaagatcctc gaatagatca
     6121 actcgcgcca cgtgcatctc gtaaacgaaa ccggtaaacg tgtaaacttt tgacatggtg
     6181 aaacaaaaag aacaaaacaa agaagcgctt ggtaaaggaa tacgttcatt acttcaacat
     6241 atagattccg atttcaagac gatgacgggt ttgaagaccg atgttgttga agcagtgacg
     6301 catatttcgc gtatacccct cgaagcaata ttgcctaatc cgaaaaatcc acgccgtgac
     6361 tataacgaag aagcgttgca ggaactggcc gcttcaatga aagagtttga tatcgttcaa
     6421 cctttgactg tttcaaaact ctccgatgga aaataccaac tgatcgcagg tgagcgccgg
     6481 ctgagagcgg caaggatggc tggcctgaaa gatgtgcctg tttacatacg gcaggcaaat
     6541 gacagagaac ttcttgagtt ggctctgctt gaaaatctgc agcgcgaaga ccttaatgcc
     6601 atcgaaattg gcttaagcta caggcgcatg atggacgaat tgaattatac gcaggagcag
     6661 gtagctgaac gtatgggcaa agaaagaagc acgatcacaa actatatacg actcttaaag
     6721 cttccgcccg atatccaact tgccgtacga aatggaaatt tgagtatggg ccacgcgcgc
     6781 gcattgatca acattgatac cgtcgataag cagatctatg tttacaatga gattaaaaac
     6841 aaacagctaa gcgttcgcca aaccgaagaa ctggtacgca ggctttatcg tggtcatgtc
     6901 aacgctgtta aatcttcacc aaaaccgggt gtacacgagg cttataagcg cattgaaaat
     6961 aatttagcgt cctatttctc aacaaaagta ttgctgcatc ataattcaac tggcaaaggc
     7021 agcattacca ttgaatatta ttcacctgaa gagttgaata aaattctgga gttgatgaat
     7081 gtgcaggcag attaaacaat gcgtctatcg tattttttta tattggtgtt ttccgtcgcc
     7141 tctttgcgcg cctccgcaca acaagatagt agtactaaag ttaataacgg gaaggagatc
     7201 ctccttgata cgctgaagcc acagaaagat tccgcaagtg ttaagcttgc aaaaaatgat
     7261 tctctgtcaa cagtgcatca cgacccgcga aaagcaactc gtcgttcagc cattttacca
     7321 ggttggggcc aggcatataa tcaccagatc tggaaaatcc ctatcgtgta tggggcactg
     7381 gcggtgcctg caagtctctt cgtctacaac aacacatggt accagcgaac aaaagatgct
     7441 tataatattt tggtcaacgg cggcgacact tcgcagatcc atgaccaatt gaaggggctt
     7501 tccgcagaat cgatgcagta ttaccgaaat gtgttcagga agaacaggga ttattcggcg
     7561 ttattctttc tccttgtgtg gggattgaat gttgctgacg caacagtttc tgcacatcta
     7621 aaagactacg atatcggcaa tgatctcagc ctccacctcg agccgaactt cgatggaaaa
     7681 agctcttcct tgtcgatgtt gcttacattc cggtcgccat ctaaaagtct tctcccgtct
     7741 tcgttttaat gatgccgggt cgttatctca atggacttgt cgggaacgtg aagccgttgt
     7801 tactgcgctg ttacctggat aacaactgcc tggcaaattt ctttttcaga accttcgcaa
     7861 aaagccgcga aggtttttta ttttgacact tgcctgtata tttactgcat ccaggagaaa
     7921 tttatgaaaa tagcgctgat tgggtatgga aagatgggca aagccatcga agagaccgct
     7981 attgacaaag gcgacgccgt tgcattaaag atctcttctt caaataagga tgcatttaca
     8041 acagaaagtc tcgcgccggc tgatgttgca atagagttta caaaccctga aagcgcggtg
     8101 gacaacataa aaaaatgttt cgatgcaaat atccccgttg tatgcggaac caccggatgg
     8161 ttacaaaggt gggatgaagt agtgaactat tgcaacgcga aaaacggaac gtttctatac
     8221 gcgagtaatt tcagcgtagg c
//
LOCUS       DASQJI010000272         5070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_489729,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000272 DASQJI010000000
VERSION     DASQJI010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5070
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489729"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VEV83_07635"
     CDS             <1..429
                     /locus_tag="VEV83_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HYK45022.1"
                     /translation="CESIADGKPRCEIHPLGIGGKADPVRLVFNVAAGPALNASIIDL
                     GNRFRMLVNDVEAVAPQHDLPKLPVARVLWKPYPDMKTGCTAWIYAGGAHHTCYSQNL
                     TSEHLEDFANMAGIEFVHIGKNTNLHQLKNELRWNEMYYR"
     gene            465..2219
                     /locus_tag="VEV83_07640"
     CDS             465..2219
                     /locus_tag="VEV83_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HYK45023.1"
                     /translation="MTYLKAIDWIEILFYFIIVAGIAWWSTKKKKDSAEDYFLAGRHL
                     GWFLVGASIFASNIGSEHLVGLAGSGATDGVALAHYELHAWCLLVLGWMMVPFYMRSK
                     VFTMPEFLERRFSPQARTVLSVISLIAYILTKIAVGIYAGGIVFRVLLPDVHLWGMDS
                     FWIGSVLLIILTGVYTILGGLRAVVYTETLQTFIKIIGSLMITYFGLKALGGWDKLRE
                     ICGSEMFNLWKPLVPHGSEGTWAPVKEAGKEAWYFNDNYPWLGMLFCAPIIGLWYWCT
                     DQYIVQRVLGAQNATQARKGSIFSGFLKLLPVFLFIIPGMICFALAKSGTNVAIHNEL
                     FDASGHLIRDRAQEAFPLLVINILPIGVRGIVVAGLLSALMSALAGVFNASSSLFTMD
                     FYSRFRPNASQHQLVWVGRVATVVMVIIGLMWIPVIQGGKGLYDYLQGIQAYLAPPIF
                     VVFFFGIFMKRLNAKGCLATLITGFLMGLFRLAIDTPVKLGDGFSYEQGSFLWIVNNI
                     FFQYYSLLITVICILVFIIVSYATKAPDYARISGLTFSTLTADDRRETRSSWSTKDVI
                     FSVLLVVVIIAVYMYFTG"
     gene            2290..2520
                     /locus_tag="VEV83_07645"
     CDS             2290..2520
                     /locus_tag="VEV83_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45024.1"
                     /translation="MIASSETEVGKIFTADTRSDIGSEAEKMKYANSVNGLVVKFIRL
                     AYDDTIKAEMLIMEGIYPLDYRAYEVEKRELW"
     gene            complement(2626..3540)
                     /locus_tag="VEV83_07650"
     CDS             complement(2626..3540)
                     /locus_tag="VEV83_07650"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HYK45025.1"
                     /translation="MKAIGNTPLIKLERLCEPGSAEIFVKYEGANATGSMKDRMALSM
                     VEAAEKRGQLKPGGRVMDYTGGSTGSSLAMVCATKGYKAHFVSSDAFAQEKLQTMRAF
                     GATLEIFPSENGGITAKLIDSMVARARELSKEPNTFWTDQFNNVDNRNAYHKMAREIL
                     HELSDHIDEFIMGVGTGGCFSGNAEVLKHSIPNIHCIAIEPYHVRALSGGEISGKHKL
                     EGIGAGFVPSICRLDLADEIMAVKDEDAYETARRLAREEGIFGGTTSGANVWAAIQRA
                     RVIGAGKKIVTVIVDSGLKYLNGDLYKL"
     gene            complement(3570..>5070)
                     /locus_tag="VEV83_07655"
     CDS             complement(3570..>5070)
                     /locus_tag="VEV83_07655"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HYK45026.1"
                     /translation="FASNQKTKSAFDKIKVDAGYISGTTSSTSDIHIFKGIPFGAPPV
                     GEFRWKEPQPVQPWSGVKVCDKFGPSPMQAKPAPFSMWSEEFLIPKEPISEDCLYLNV
                     WTGAQSTEEKRPVLVWIYGGGFSSGGSAVPIYDGEAMAKKGIVFVSINYRVGIFGFFA
                     TPQLTKESGRNASGNYGLMDQVAALKWVRKNIAAFGGDPGNVTIAGQSAGSMSVNCLV
                     ASPLARDLFSKAIAESGASFMSGNASLRKAEEDGEKIMHSLNASSLSDLRKLPADSLM
                     KQAQGFRGPIIDGYVLPDAIANIFSRGKENKVSLLTGWNQDEGLLFGTLKTAVNFQKD
                     AEQKYGANAQHFLRFYPAANDSEAMVSQLDLARDQIFGVQNYAWANIEAAGGATVYMY
                     RFTHIPPATGEYAKYRAFHTAEVPYAYDNLRFVNRPWKSEDYELATIMSSYWANFAKT
                     GDPNGPNLPVWERYHTTHKKIMVLDDKPQTASLPDNERLDFLYKLMIKS"
BASE COUNT         1269 a         1163 c         1172 g         1466 t
ORIGIN      
        1 tgtgaaagta ttgctgacgg aaaaccgcgt tgcgaaattc atccgttggg cattggcgga
       61 aaagccgatc ctgtgagatt agttttcaat gtagcggcgg ggcctgcgct taacgcttct
      121 ataattgatc tgggcaaccg gtttcgtatg ctcgtgaacg atgttgaagc ggtagcgccg
      181 caacatgacc ttccaaaatt gccggttgcc agagtactgt ggaagccgta tcctgatatg
      241 aagaccggtt gcacggcgtg gatatatgcg ggcggtgcgc atcatacatg ctacagccaa
      301 aacttaacat cggagcattt ggaagatttc gcaaacatgg ccggaattga atttgtacac
      361 atcggaaaaa atacaaatct tcatcaatta aagaatgagt tgcggtggaa tgaaatgtat
      421 tacaggtaat gcactaatca tcttccaaaa ccaaaatatc aagcatgact tatctaaaag
      481 caattgactg gatcgagatc ctgttttact ttataatagt ggccggcatc gcctggtggt
      541 cgacgaaaaa gaaaaaagat tctgccgaag actattttct cgccggccgt cacctcggct
      601 ggttccttgt tggtgcatcg atctttgcat caaacatcgg ttcagagcat ttggtgggac
      661 ttgcaggctc aggcgccacc gacggcgttg cacttgcaca ctatgaattg cacgcgtggt
      721 gtctcttagt tctcggctgg atgatggtcc cgttttacat gcggtcgaaa gtttttacga
      781 tgcctgaatt tttggaaaga agattttcac cccaggctag aacggtgctt tcggtaatct
      841 cacttattgc gtacatactc acaaaaatcg cggtcggtat ctatgcgggc ggcatagtgt
      901 tccgcgtgtt gttgcccgac gtacatcttt ggggaatgga tagtttctgg ataggttcag
      961 ttttactgat catattaacc ggtgtctata caatacttgg agggctgcgt gccgtagttt
     1021 acaccgaaac attgcaaaca ttcatcaaga tcatcggctc gttaatgatc acctattttg
     1081 gattgaaggc acttggagga tgggacaagc tgcgcgaaat atgcggaagt gaaatgttca
     1141 atttatggaa accgcttgtg cctcacggct ccgaaggaac gtgggcaccg gtaaaagaag
     1201 caggaaaaga agcatggtat ttcaacgata attatccgtg gctcggcatg ttgttttgtg
     1261 cacccatcat cggcttgtgg tattggtgca ccgaccagta tattgtccag cgtgtactcg
     1321 gagcacagaa tgcaacgcaa gcaagaaagg ggtcaatatt ctctgggttt ttaaagctct
     1381 tacctgtgtt tctttttatc attcccggaa tgatatgttt tgcgttggca aaaagcggaa
     1441 cgaatgtcgc cattcacaat gaactatttg atgcgagcgg tcatttgatc cgggatcgcg
     1501 cgcaggaagc gtttccgttg ctggtgataa atattttgcc gataggcgtt agaggcattg
     1561 tcgtggcagg attattatca gcgctgatga gtgcactcgc cggcgtcttc aatgcatcat
     1621 catcactctt tacgatggac ttctactcac gctttaggcc gaatgccagc cagcaccagt
     1681 tggtgtgggt gggaagagtg gcaaccgttg taatggtgat catcggcttg atgtggatac
     1741 ctgtgataca aggtggaaaa ggtttgtatg attacctgca gggaatccag gcatatctcg
     1801 cgccgccaat atttgttgtt ttctttttcg gcatattcat gaagcgcctg aatgcaaaag
     1861 gatgtctcgc gacattgatc acgggatttt taatgggctt attccgcctc gctatcgata
     1921 cgcctgtaaa gttgggcgac gggttttcat atgagcaagg ctctttcctg tggatcgtaa
     1981 ataatatttt ctttcaatac tacagtttgt tgataacggt gatctgtatt cttgtcttta
     2041 taatcgttag ctatgcaaca aaagcacccg actacgcaag aatctccggc ctcacttttt
     2101 caactttaac cgcagacgac cggagagaaa caagatcgag ctggtcaacg aaagatgtga
     2161 tcttttctgt tttattggtt gtggtgatca tagcggtata catgtacttc accggctagt
     2221 aattattcga aaaaaaagta gttagttcat gaagtatccg cgcctccttt cttccggtca
     2281 aacaataagg tgatcgcatc gtctgaaaca gaggtgggga agatctttac agcagatacg
     2341 cgcagtgata tcggttcaga ggcggagaaa atgaagtatg caaattcagt aaatggcctg
     2401 gttgtaaaat ttattcgcct ggcttacgat gacacgatca aggctgagat gctgatcatg
     2461 gaagggatct atccgttaga ttaccgggcg tatgaagttg aaaaaaggga attgtggtga
     2521 aacctttttg aagatgaatt gaatgaatgg cacaaatccg gctttgttca tcagtatatc
     2581 ctttactgcg tgaatatttc ttgcatcgta ggcagtttgt atgattcata atttatacaa
     2641 atctccattc aaatatttca aaccggaatc aacgataacg gtcacgatct tcttcccggc
     2701 tccgatgact ctggctcttt gaatcgcagc ccacacattt gcgccggaag tcgttcctcc
     2761 aaatatgcct tcctctcttg ccagccgtcg tgcggtttcg tatgcatctt cgtctttcac
     2821 cgccatgatc tcatccgcaa ggtcaagccg gcagatggac ggaacaaagc cggcaccaat
     2881 gccttccaat ttatgtttgc cggatatctc tcctcccgaa agtgcacgca catgatacgg
     2941 ttcaatagca atgcaatgga tattaggaat tgaatgcttt agcacttctg cgttgcccga
     3001 aaaacatccg cccgttccaa cgcccatgat gaattcgtcg atgtgatcgc tgagctcatg
     3061 cagtatttct ctcgccattt tgtggtaggc atttcgattg tcgacattgt tgaactgatc
     3121 ggtccagaag gtattgggtt ctttgctcaa ctctctcgct ctcgcaacca tcgagtcaat
     3181 cagttttgcc gtgatgccgc cattttcact tggaaatatc tcgagggtcg caccgaatgc
     3241 acgcatggtt tgcaatttct cttgcgcaaa agcatcagac gaaacgaaat gcgccttgta
     3301 tcctttggtg gcgcacacca tggcaagaga gctgccggtg cttccgccgg tgtaatccat
     3361 cactctgcca cccggcttga gctggcctct tttttccgct gcttcaacca tggaaagggc
     3421 catgcggtct ttcatacttc ccgttgcatt agcgccttcg tatttcacaa atatttccgc
     3481 agaaccgggt tcacacaagc gctcgagttt tattaacggt gtgttgccta ttgctttcat
     3541 tgttggaatt taggtatcat gaattgattt caacttttaa tcattaactt atacagaaaa
     3601 tccaatcgct cgttatcagg caatgatgct gtttgaggct tgtcgtcaag aaccataatt
     3661 tttttgtgtg ttgtatgata tcgttcccac accggaagat tcggcccgtt tggatccccc
     3721 gtttttgcaa agtttgccca ataagatgac atgatcgttg ccagctcgta gtcttcgctc
     3781 ttccacggac gatttacaaa tcgtaagtta tcgtaagcat acggaacttc ggcagtgtga
     3841 aatgcgcgat acttagcgta ttccccggtt gcaggcggta tgtgtgtaaa gcgatacata
     3901 tacacagttg ctccgccggc agcctcgata tttgcccacg cataattctg caccccaaaa
     3961 atttgatcgc gtgcaagatc gagttgagag accatcgctt ccgaatcatt ggcagccggg
     4021 taaaatctta aaaagtgctg cgcgttcgcg ccatattttt gttctgcatc tttttgaaaa
     4081 tttaccgctg tttttagagt accaaataac aatccttcgt cttgattcca gccggtaagc
     4141 aggctcacct tattttcttt gccccgcgag aaaatgtttg cgatcgcatc aggcaaaaca
     4201 taaccatcga tgatcggtcc acggaagccc tgcgcttgct tcatcagact atcggcaggc
     4261 aatttccgaa gatcgctgag cgacgaggca ttcaatgaat gcataatttt ttcgccgtct
     4321 tcttctgctt ttcgtaatga agcatttccg ctcatgaaac ttgcaccgct ttctgcaatt
     4381 gctttagaaa acaaatctct tgcgagtggc gatgcgacca aacaatttac gctcatcgaa
     4441 cctgccgatt gtcccgcaat cgtaacgttg cctggatcgc cgccaaatgc tgcaatattt
     4501 tttcgcaccc atttcaaagc agcaacctgg tccatcagtc cgtaattccc cgatgcattc
     4561 ctgcccgatt cttttgttag ttgcggagtt gcgaaaaatc caaatatgcc gacacgataa
     4621 ttgatgctga cgaacacaat tcctttttta gccattgcct ctccgtcata aataggcaca
     4681 gcacttcctc cgcttgaaaa accgccacca tagatccaaa caagaacagg tcttttttct
     4741 tccgttgatt gtgcgcctgt ccaaacattg agatacagac aatcttcact gatcggctcc
     4801 ttcggtatta gaaactcttc cgaccacata ctgaatggcg ctggttttgc ctgcattggg
     4861 ctcgggccaa acttgtcaca gacctttacg ccactccatg gttgtacagg ttgtggttct
     4921 ttccaacgaa attcaccaac aggcggcgca ccaaacggga tgcctttgaa aatatggata
     4981 tcgcttgttg aacttgtagt gccggaaata taaccggcgt ctacttttat tttgtcaaat
     5041 gcggatttgg ttttttgatt ggatgcaaac
//
LOCUS       DASQJI010000273         7228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2947388,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000273 DASQJI010000000
VERSION     DASQJI010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7228
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2947388"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="VEV83_07660"
     CDS             <1..727
                     /locus_tag="VEV83_07660"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HYK45027.1"
                     /translation="HPELKQAIDQFEVALEKHAFENTVDPPARVKTFLNASLRDDFIL
                     SEKEKPNRPEDATPFIAPYQKRRTDTYWKYLAAASIILLLTSTALNFYFYSNFRNSSD
                     KYQALLNERNTLQADNKVYESRLNNIEQSLKLMEDPRMISIKMPGMPGKEQNLATVFW
                     NTQTKEVYLYPNSMARTPPGKQYQLWAIVDGKPVNAGMVGDCEGLCKMKVIDHAEAFA
                     ITLENAGGSNTPTVTAMYVMGKV"
     gene            787..1176
                     /locus_tag="VEV83_07665"
     CDS             787..1176
                     /locus_tag="VEV83_07665"
                     /inference="COORDINATES: protein motif:HMM:NF037970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HYK45028.1"
                     /translation="MKPRLTSFIPAAIWFVMTTFLLVIPGSDIPKANFLDEIYFDKWV
                     HIGLFGGLTFLTAYPFVSKQLASKKLLIKIFTSFIIYGVLMEFVQKFWASERTFDGWD
                     MVADATGCFAGFVLSNSWRLRLINRKR"
     gene            1447..3051
                     /locus_tag="VEV83_07670"
     CDS             1447..3051
                     /locus_tag="VEV83_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HYK45029.1"
                     /translation="MKRNVTLKVLPHEAASSEIITQYLASSLAIPSASVTGFRILKHS
                     IDARSRQPTVNLTIETCVDEPFHRTIPVRIKFKDTTKSSRRILIIGGGPAGLFAALKL
                     LESGIKPVIIERGKDVRARRRDLAILNKEGVINPESNYCFGEGGAGTYSDGKLYTRSS
                     KRGSVERILNLFVQFGADEKILYESHPHIGTNKLPHIITAIRKQIIHCGGEFLFEKKV
                     IDFIVRDQLIQSVVTTDGQIFKGDAVILATGHSARDIFQLLDSKKILIEAKPFALGVR
                     VEHPQQLIDSMQYHTAVRDEYLPPASYNLVHQAGDRGVFSFCMCPGGIIAPAATNNGE
                     IVVNGWSPSKRNNPFANSGIVVEVRLHDLRNYNSYSESKEKVPPSLLGIFFQSSIERK
                     AFEAGGGAFVAPAQRMVDLVNNKRSSSLPSCSYLPGVQSADLSDVLPAFIYGSLQTAF
                     KEFGKKMKGYFTNDAIVVATESRTSSPVRIPRDVLLLHHPEIKNLYPCGEGGGYAGGI
                     VSAAMDGERVASAIIKNLASVAHKQF"
     gene            3147..4082
                     /locus_tag="VEV83_07675"
     CDS             3147..4082
                     /locus_tag="VEV83_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK45030.1"
                     /translation="MSLLELHNLKKYFATQKAVDDISFDVQQGSIFGLLGPNGAGKTT
                     LLRMITGIFYPDDGEIFFDGKKFDPLADIVKIGYMPEERGLYKKMKIYDQALYLARLK
                     GLSRIDAAQKIKFWFERLKMESWWNKKVEDLSKGMSQKLQFVTTVLHEPKLIILDEPF
                     SGLDPLNANLIKDEIYGLAQKGSTIIFSTHRMEQVEEICDHIVLVNLGKKILDGTVQD
                     VKHEYKENKFNVQIEGIPPPLESRAFEILHQKANKLVVKINDGFKSNDVLKYFIDRQI
                     NIEAFNEILPSLNEIFIRLVENTKADARPFQHVEV"
     gene            4118..5431
                     /locus_tag="VEV83_07680"
     CDS             4118..5431
                     /locus_tag="VEV83_07680"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45031.1"
                     /translation="MNKIALIARREFLTRVQKKTFLLTTILLPLLFFGFYALMIYFSV
                     STDEVYNIAVEDEANIFRGKIEGDENVKFTFVTDQSAAQLKQQVEKGKYDGYAYIPRS
                     TKILDQVSIPVVTKKSVGLMSRGKIEDKLNNALEQQRLLELNISKAQLDSAKKEGDIN
                     FSTIQGKNDSGEEAGISYAIGYISGFLIYIVLFIYGAMVMRGVMEEKVSRIAEVIVSS
                     VKPFQLMMGKIFGIGAVGLVQFIIWIILMISLNFLLPVLIPGLADKMHSSNMQNTSIQ
                     AAETIKNSGLIHSSGINFPLIIGCFIFYFIGGYLLYSSLFACVGSAVNEDPQDAQSLM
                     LPITMPIIFGIVIMTKAVNEPTSGLAVFGSLFPLFSPIVMMARISHGVGDVVPVWQLL
                     LSMVLLVLGFIVTTWFAAKVYRTGILMYGKKPSWKEMWKWALRRS"
     gene            complement(5501..>7228)
                     /locus_tag="VEV83_07685"
     CDS             complement(5501..>7228)
                     /locus_tag="VEV83_07685"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45032.1"
                     /translation="NYDGVNVYGDEVSADLTIAGLFPISRTGYYEKDLVDYDAYNFKV
                     SGGLYYKISPNTEASLTANWGKGTTVYTGADRYSLKNFSIGQYKLEVKNPNWYLRAYT
                     TQENSGDSYATTLTAISINNSWKDNGVWFNTYAVAYGTALAGGKTDEEAKAFARATAD
                     QGRFEPGTSDFNTAFKNSITTPISKGGSQFADKSALYQIEGQYNFSQYVKVVDVLVGA
                     NYRSYHLNSNNTIFYEPDGPVDIAEYGGYIQLQKSFLNDVLKLSASGRYDKNENFEGR
                     FTPRATATIEVAKDNNIRLSYQQAYRFPDNQDQYINLQTPGSILIGCLPIFNTLYQFD
                     TKPVYTAQSIVDFRTTYFERGEFNPDTLVKANFGKAKPETMSSYELGYRGVINSKLLI
                     DVYYYYSKYKDFIGREAVGRSDSLTGLLNPYATTNYSFVVNSSTPVKANGWGITAEYQ
                     LGKGYSVMGNVYGDQLTGVPSELITFFNTPKTRFNLGLSNSNVGKGIGFNVIYKWQDK
                     IDWEGTFGTGTIPAFGTLDAQVSYHFTKEKILLKLGGTNITNHYYRSAFGNPYIGALY
                     YVSIGYNVF"
BASE COUNT         2086 a         1542 c         1609 g         1991 t
ORIGIN      
        1 gcatcctgaa ttgaaacaag caatcgatca attcgaggtt gcactggaaa agcacgcttt
       61 tgaaaataca gtggacccgc cagcacgggt aaaaactttc ttgaatgcat cgttgaggga
      121 tgattttatt ttgtcggaaa aagaaaaacc gaaccggcct gaagacgcaa cacctttcat
      181 cgcgccttat caaaaacgtc ggacggatac atattggaaa tatttggcag cagcgtcgat
      241 tatcttactt ctcaccagca ccgcattgaa tttttatttc tattcaaact ttaggaattc
      301 aagcgacaaa taccaggcgc tactcaatga gcgaaacacc ttgcaagctg acaataaagt
      361 gtacgaatcg agactgaaca acatcgagca aagtttgaaa ctgatggaag atccgcggat
      421 gatcagcatc aaaatgcctg gaatgccggg taaagagcaa aacctcgcaa ccgttttctg
      481 gaacacccaa actaaagagg tgtatctcta tcccaattca atggccagga cgccgcctgg
      541 aaagcaatac caactttggg cgatcgtaga cggtaaacct gtgaatgccg ggatggttgg
      601 agattgcgag gggttgtgca agatgaaggt tatcgaccac gccgaagcct ttgccatcac
      661 gctcgagaat gccggcggca gcaacacgcc aaccgtcacc gctatgtacg ttatgggcaa
      721 agtgtaagca cgtcagcttt ccccgtcgca cgctgaatat ttattagtat acatttgccc
      781 aaaaaagtga agccccggtt aacctcgttc atacccgcag ccatttggtt tgtgatgacc
      841 accttcctgc tcgttattcc cggctcagat attcctaaag caaattttct tgatgaaatc
      901 tatttcgata aatgggttca tataggtttg tttggaggat taaccttttt aactgcctat
      961 ccattcgttt caaagcagct cgcctccaaa aaattgttga ttaaaatctt cactagtttc
     1021 atcatttatg gggtgcttat ggagtttgtc cagaaatttt gggcgtcaga gcgtacgttt
     1081 gatggctggg atatggttgc agacgctacc gggtgcttcg ccgggtttgt attatcgaat
     1141 agctggcggc tacgacttat taatagaaag cgctgagtga tacaaaaaaa taagcccctg
     1201 tagacacagg ggccgcaacc aaaactaact gcttatgaga aaattgacta cttgctttat
     1261 ttattttatt actcaaatca aatgccagaa atttattttc atttgttaag gtccgatttt
     1321 ttttctggcc ttgcgaagta atagagcgca aaaacccggc taagtttagc caataattgt
     1381 taagttatcg ttaggaatcg ttcattcaag ccacggatga gcttttaagg ataagcccct
     1441 cacagcgtga aacgaaatgt gactttaaag gtgttgccac acgaagcggc cagtagtgag
     1501 atcattacac aatatctcgc gtcttctttg gcgattccct ctgcatcggt gacgggcttc
     1561 agaattttaa aacactccat tgacgcgcgc tccaggcaac caaccgtcaa cctgacgatt
     1621 gagacttgtg tggacgagcc ctttcacaga acaatcccgg ttcgcatcaa attcaaagac
     1681 acaacgaaat ccagtcgacg gatcttgatc atcggtggcg ggccggctgg tttgttcgcc
     1741 gctttgaaac tgcttgaatc aggaataaaa cccgtcataa ttgaaagagg aaaggacgtc
     1801 cgtgcgcgac gccgcgacct cgccatttta aataaagaag gtgtcatcaa tccggagagt
     1861 aattactgtt ttggtgaagg cggagcgggc acttacagcg acggcaaatt gtacacacgg
     1921 agcagcaagc gcggaagtgt cgaaaggatc ctcaatttgt ttgtgcaatt tggtgcagac
     1981 gaaaagatac tgtatgagtc gcaccctcac ataggcacga acaagctgcc acacattatc
     2041 acagcaattc gaaaacaaat cattcattgc ggaggcgaat ttctgttcga aaaaaaggtc
     2101 atcgacttta ttgtgaggga tcaattaatt caatccgttg ttacaactga cggacaaata
     2161 tttaaagggg acgcggtaat tctagcaacc gggcattcgg caagggatat ttttcagtta
     2221 ttagattcaa aaaaaatttt gatcgaggca aagccttttg cgcttggagt aagggtcgag
     2281 caccctcagc aactcatcga ctcgatgcaa tatcacactg ccgtccgtga cgaatatctg
     2341 ccgcccgcat cttacaacct cgtgcaccag gcgggtgata gaggcgtttt cagcttttgc
     2401 atgtgtccag gaggaatcat tgcgcccgcc gccaccaaca acggtgaaat tgttgtaaac
     2461 ggctggagtc ccagtaagcg caataatcct tttgctaata gtgggatcgt tgtggaggtc
     2521 aggctgcacg atttgcggaa ctataacagc tattccgaaa gcaaagagaa agttccacct
     2581 tcgcttttgg gaattttttt tcagagctcg attgaaagaa aggcgttcga agcgggcggt
     2641 ggcgctttcg ttgcaccggc acaacgaatg gtcgatttgg tcaacaacaa acgctcttcc
     2701 tctttgccgt cttgcagtta tttacccggt gtacaaagcg ccgacttaag tgacgtattg
     2761 ccggctttca tttatggatc attacagaca gcatttaaag aattcggaaa aaaaatgaag
     2821 ggatacttta ccaatgatgc gatagttgtt gctaccgaaa gccgtacgtc atcgcctgtg
     2881 cgcattccaa gagacgtttt attgctgcat catcctgaaa taaaaaatct gtatccatgc
     2941 ggagaaggag gcgggtatgc gggtggaata gtgagcgctg caatggatgg cgagagagtg
     3001 gcgtcagcga tcataaaaaa tctagcttcg gtcgcacata aacaattttg aaaccgctca
     3061 catttttttc cttttgccgc acttcttcgg ctcaatgatc gcactcagca ttttacaact
     3121 acatttgaaa cggctaacac tctaacatga gcttactgga actgcataat ttaaaaaaat
     3181 attttgctac acaaaaagcg gtcgacgata tcagcttcga tgtgcagcaa ggcagcattt
     3241 tcggtttact tgggccgaat ggcgccggaa agacgaccct cctgaggatg ataacaggca
     3301 tcttttatcc cgatgacggt gagatatttt ttgacggaaa aaaatttgac ccgcttgcgg
     3361 atatagtcaa gatcggatac atgcctgagg agcggggact atacaagaaa atgaagatct
     3421 atgaccaggc cctatacctc gcacgattaa aaggactcag ccgtattgac gcagcgcaaa
     3481 agatcaaatt ctggttcgaa cgtctcaaga tggagagttg gtggaataag aaagttgagg
     3541 accttagtaa aggcatgagc caaaagttgc aatttgtaac cacggttttg catgagccaa
     3601 aattgatcat cttagacgag ccatttagcg ggctcgaccc tttaaacgca aacctaatta
     3661 aagatgagat ctatggtctt gctcagaaag gcagcacgat cattttcagc acgcacagaa
     3721 tggaacaagt ggaagagatc tgcgaccata ttgtactggt gaacctcggc aaaaaaatcc
     3781 ttgacggaac agttcaagac gtaaagcatg aatacaaaga aaacaagttc aacgttcaga
     3841 ttgaaggtat accgccgcca cttgaaagtc gcgcatttga aatccttcat caaaaggcaa
     3901 acaagcttgt tgtaaagatc aatgacggtt ttaaaagcaa tgatgttttg aaatatttca
     3961 ttgaccgaca aataaacatt gaagcgttta acgaaatact gccatcactt aatgaaatat
     4021 tcatcaggct tgttgaaaat acaaaagcgg atgcacgtcc ttttcaacac gttgaagtgt
     4081 gacatgcaaa ctgtccatcg aacactaaat atcttttatg aataagatag ctctcattgc
     4141 tcgccgtgag ttcttaacgc gggttcaaaa aaaaactttc ttacttacca caatattatt
     4201 gcctctgttg ttttttggat tttatgcgct catgatatat ttctccgtga gcactgatga
     4261 agtgtacaac attgcagttg aagatgaggc gaacatcttc aggggaaaaa tagaaggaga
     4321 cgaaaatgtg aaatttactt tcgtcaccga ccagtccgcc gcgcagctga aacaacaggt
     4381 tgaaaaagga aagtacgacg gctacgcata cattccgcga agcacaaaaa ttctagacca
     4441 ggtaagtatt cctgttgtta cgaaaaagtc tgtagggctt atgtcgcgcg gaaagataga
     4501 ggacaagctt aacaacgccc tggagcagca acgcctgctg gaacttaaca tctccaaggc
     4561 tcagctcgac agtgcaaaaa aggaaggcga catcaacttt tccactatcc agggaaaaaa
     4621 tgattcgggc gaagaggccg gtatcagcta tgccataggc tacatctcag gcttcctgat
     4681 ttacatcgtg ctttttattt atggcgcgat ggttatgcgc ggcgtgatgg aggagaaggt
     4741 cagtcgcatc gccgaagtga tcgtcagcag cgtaaaacca ttccagctaa tgatgggaaa
     4801 aatttttggg atcggcgccg ttgggctggt tcagttcatc atatggatta ttcttatgat
     4861 cagcctgaat ttcctgttac cggtacttat tcccggcctt gccgacaaga tgcattcttc
     4921 gaacatgcaa aacacatcaa tacaggcagc agaaacgata aaaaatagcg gattgattca
     4981 tagctcggga ataaattttc cacttattat tggttgcttc attttttatt tcatcggcgg
     5041 gtatttgcta tactcatcac ttttcgcctg cgtcggaagc gccgtgaacg aggacccaca
     5101 agatgcccaa agcctcatgc tgccgatcac tatgccgatc atttttggga ttgtcataat
     5161 gaccaaagct gtgaacgaac ctacgagcgg cctcgctgtg ttcggaagcc tgtttccctt
     5221 attctctcca attgtaatga tggcgcgcat atctcacggc gtaggcgacg tggtcccggt
     5281 ttggcagttg cttttgagca tggtattact ggtgttagga tttattgtca ccacgtggtt
     5341 tgctgcgaaa gtatatcgca ccggaatttt aatgtacggg aaaaagccga gctggaaaga
     5401 aatgtggaag tgggcgctgc gtcgttcctg aagcaccaat gaataaaaac gaaaatgccc
     5461 ttcattgctg agggcatttt cgtttaggac gcggttgttt ttaaaagacg ttgtaaccga
     5521 tgctcacgta gtacaaggcg ccgatgtatg gatttccaaa tgcgctacgg tagtaatggt
     5581 ttgtaatgtt tgtgccgcca agtttcagca agattttttc tttggtgaaa tgatagctta
     5641 cctgcgcatc gagtgtacca aatgcaggta tagtacctgt gccaaatgtg ccttcccaat
     5701 ctattttatc ctgccatttg taaatgacat taaacccgat gcctttacca acgttcgagt
     5761 tggacaatcc aaggttaaac cttgtctttg gcgtattgaa gaatgtaatt aattcggaag
     5821 gcacacctgt caactgatct ccataaacat ttcccatgac tgaatatccc ttgccaagct
     5881 ggtattcggc agtgatgccc caaccattcg cttttacagg tgtagagctg tttacaacga
     5941 aagaataatt tgtggttgca tatgggttta ataaaccagt tagactatca gatctgccta
     6001 cagcttcacg ccctataaaa tctttatact tactgtaata ataataaaca tcgatgagta
     6061 atttactatt aattactccg cgatagccta gctcataaga tgacatggtt tcaggttttg
     6121 ctttaccaaa atttgctttt acaagtgtgt ctggattaaa ctcacctctt tcaaaataag
     6181 tggttctaaa gtcaacgatg ctttgtgctg tataaacggg cttcgtatca aattgatata
     6241 aagtattaaa tatgggtaaa caaccgatta aaatacttcc cggcgtctgc agattaatgt
     6301 attgatcctg gttgtctgga aagcgatagg cctgttgata agaaagacgt atgttgttat
     6361 cttttgctac ttcgattgtt gctgttgctc ttggagtaaa tcgtccttca aaattttcat
     6421 ttttgtcata tcttcctgat gcgcttaatt tcaaaacatc atttaaaaat gatttttgca
     6481 attgaatata gccaccgtat tcagcaatat caaccgggcc atcgggttca tagaaaatgg
     6541 tattgtttga gttgaggtga tatgaacgat aattggcacc gaccaacaca tcaacgactt
     6601 tcacgtattg agaaaaatta tactgccctt caatttggta aagcgctgat ttatctgcga
     6661 attgagaacc gcctttactg attggtgttg taatggaatt tttaaaggca gtattgaaat
     6721 cacttgttcc gggctcaaat cttccctggt cggcagtggc ccgggcgaac gctttcgctt
     6781 cctcgtctgt ttttcctcca gccagggcgg ttccatacgc aactgcatat gtattaaacc
     6841 atacgccatt atctttccag gagttgttaa ttgatatcgc ggttagtgtt gttgcatagg
     6901 aatcaccgga attttcctgt gtagtataag ctcttaaata ccagtttgga ttcttaacct
     6961 caagtttgta ctggccaata ctgaagtttt tcaaggaata tctgtcagca cctgtataaa
     7021 ctgttgtacc cttgccccag ttagcagtca aagaagcctc agtgttaggt gatattttat
     7081 aatacagacc gccggaaact ttgaaattat aagcatcata atcaacaaga tctttttcat
     7141 aatagccggt tcggctgatt ggaaaaagcc ctgcaatggt tagatcagcg cttacttcat
     7201 ctccatacac atttaccccg tcatagtt
//
LOCUS       DASQJI010000274         1546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1873173,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000274 DASQJI010000000
VERSION     DASQJI010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873173"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..>1546)
                     /locus_tag="VEV83_07690"
     CDS             complement(335..>1546)
                     /locus_tag="VEV83_07690"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HYK45033.1"
                     /translation="KDLTNEIALCKALGDPQKNFKSIHIAGTNGKGSVSHMLAAIFQT
                     AGYKTGLYTSPHLKDFRERIKVNGEMCSEDFVVGFTQKIIPQIEALQPSFFEITVAMA
                     FEYFAQEKIDIAIIETGLGGRLDSTNIVLPELSIITNIGMDHMNMLGDTLEKIAFEKA
                     GIIKPGIPAVIGESLAETKPVFERVAKEKQAPLIFAEDHFFVADFNSDHSRLNAEVAD
                     IKKDEHYNYQLDLPGIYQNKNLITVLEAVHQLQLKKISIEQKHVEVALKKVKRLTGFH
                     GRWEKVKDNPTVIIDVAHNADGMKQVAQQLELMTYPQLHIIIGLVMDKDVQNILSLLP
                     ATANYYFTKAQIPRAIPEDELAAIAKTLQLEGKTFTNVNTALNEAMTHAHPDDVILIC
                     GSVFLAGEVNL"
BASE COUNT          415 a          306 c          347 g          478 t
ORIGIN      
        1 gatgtaggag ttaggaatta ggaattagga attaggaatt aggaattagg agaaggattt
       61 accaattggg atttgaacga accagggatt gcagatcata catcagagat ctaggaatta
      121 ggaattaaga attaagaatt aagaattagg aattaggctt tgaaccatca tgacatcata
      181 gatcagacat catagatcag agatctagga attaggaatt aagaattagg aattaggctt
      241 ttgaaccatt catgacatca gagatcagac atcatagatc agagatcaga gatgatacat
      301 catagatcag agatcataca tcatacatca gacatcagag attcacttcg cccgcgagaa
      361 acacgcttcc acaaataagt attacgtcat caggatgtgc atgtgtcatg gcttcgttta
      421 gcgctgtgtt gacattcgta aaagtttttc cttcgagttg taacgttttt gcgatggcgg
      481 cgagctcgtc ctccgggatt gccctgggta tttgcgcttt tgtaaaataa taatttgcag
      541 tcgcaggcag cagggaaagg atattttgta cgtctttatc catgacaagg ccgataatga
      601 tatgcaactg cggataagtc attagttcca gttgttgtgc aacctgcttc ataccgtctg
      661 cgttatgggc gacgtcaatg atcacagttg gattgtcctt aaccttttcc catcgtccgt
      721 gaaagccggt taaacgcttc acttttttca acgcaacttc cacatgcttt tgttcgatcg
      781 aaattttttt taattgcagt tgatgaaccg cttccaatac cgtgatcaaa tttttatttt
      841 gatagatgcc gggtaagtcg agctggtagt tgtagtgttc gtctttctta atgtctgcaa
      901 cttcagcatt aagtcgtgaa tgatcggagt tgaaatcggc gacaaagaaa tgatcttcgg
      961 caaagatcaa tggagcttgt ttttcttttg caaccctttc aaacaccggt ttcgtttccg
     1021 ccaacgattc gccgatcacg gcgggaatgc ctggttttat gatgcccgct ttttcgaatg
     1081 cgatcttttc gagcgtatca ccaagcatgt tcatgtgatc catgccaata tttgtaatga
     1141 tggagagctc cggcagcaca atgtttgtgc tgtcgagtct accgccaagg cctgtctcga
     1201 tgattgctat gtcgatcttt tcctgagcaa agtattcgaa tgccattgca actgttatct
     1261 cgaaaaaaga aggctgaagt gcttcgatct gcggtattat tttttgagtg aagccaacca
     1321 caaaatcctc gctgcacatt tctccgttta ctttgattcg ttcacggaaa tctttcaggt
     1381 gaggtgaagt gtataagccg gttttatatc ccgctgtttg aaagatcgct gccagcatat
     1441 ggctgaccga gcctttacca tttgtgccgg caatatgaat gcttttgaaa tttttctgcg
     1501 ggtcccccaa tgccttgcaa agcgcaattt cgtttgtcag gtcttt
//
LOCUS       DASQJI010000275         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_797864,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000275 DASQJI010000000
VERSION     DASQJI010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797864"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VEV83_07695"
     CDS             complement(<1..188)
                     /locus_tag="VEV83_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45034.1"
                     /translation="MTTEQAAQEIVLPKYNLTEEQEKRLILRQYRALLKVLGPKLKKG
                     DEELIRRAFEISADAHKT"
     gene            402..>1514
                     /locus_tag="VEV83_07700"
     CDS             402..>1514
                     /locus_tag="VEV83_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45035.1"
                     /translation="MQIRMSGTGEKKYFNVSVLKRVFEFVRPYRWRFIVSVILAIVLS
                     FFTPVRPHFIQLTVDKATGKAVHTPWIIQILFPHTQLNDAWQFVIAVTIFQVIFIFVE
                     TAARFYFSFITAWLGQSVVRDMRTAVYKKILSLNLAQFDKTPIGTLTTRTINDIESIN
                     DIFSDGLIPILADLLSIIVVLVTMFVTNWQLTLIALIPFPLLILATYYFKESVNKSFI
                     QVRNAVAALNAFVQERITGMHILQAFAAEDRELENFKKINRHHRNANIRSIFAYSVFF
                     PIVEIVLAVSTGLLVWWLAGKAASNPIANENLAGELVAFILYLNQIFRPLRVIADKFN
                     VIQMGVIAAERVFRVLDNDDVTPLASEAETYRSPQRL"
BASE COUNT          394 a          348 c          321 g          451 t
ORIGIN      
        1 atcgtcttat gggcgtccgc tgatatttcg aatgcgcgcc tgattaactc ttcgtcgcct
       61 tttttcaatt tcgggcccag cacttttaat aacgcgcgat attgccgtaa gatgagccgc
      121 ttttcctgtt cttccgtaag gttgtatttc ggcaatacta tttcctgtgc tgcctgctct
      181 gtggtcatac ttcacgaatt tacgacaatg gcgccaatga agattttaac agctagttaa
      241 ggagcgatgc ttgatgttga aatgtgagcc gtgagaggtg aaacgtgaca catcaaacat
      301 gaaccgtgcc cgacggacac tcaccgataa ccgaataaac caattaacca accgcaaccc
      361 tcaaacgtca aacttcgaac atcaaacatc aaactttacc tttgcagatt cgtatgagtg
      421 gcacgggtga aaaaaaatac tttaatgttt cggttctaaa gcgtgtattt gaatttgtaa
      481 gaccctaccg gtggcgtttt attgtaagcg ttattctcgc catcgttctt tccttcttta
      541 cacctgttcg tccgcatttt attcagctca ctgttgataa agcaaccgga aaagcagttc
      601 atacaccgtg gatcatccaa atattatttc cgcataccca attaaacgac gcctggcaat
      661 tcgtgatcgc ggttaccata ttccaggtga tatttatttt cgttgaaacg gctgccaggt
      721 tttatttcag cttcattacg gcgtggctcg gacaaagcgt ggtgcgcgat atgagaaccg
      781 ccgtgtacaa aaagatcctg agcttaaatc tcgcccaatt cgataaaaca cctattggca
      841 ctcttaccac gagaacgata aacgatattg aaagtattaa tgatattttt tcagacggtt
      901 tgataccgat acttgcggac ctgctttcaa tcattgttgt tttggtgacg atgttcgtaa
      961 ccaactggca attgacgctg atcgctctta tcccgtttcc tttattgatc ctcgcgacat
     1021 actactttaa agaaagcgta aacaaaagct tcattcaagt gcgtaacgcg gtcgcagcct
     1081 taaatgcttt tgtgcaggaa cgcattaccg gcatgcatat tttgcaagcg ttcgctgcag
     1141 aggacaggga gcttgaaaat ttcaaaaaga taaaccgcca tcatcgaaat gcaaacatcc
     1201 ggtcaatttt tgcttactcc gtcttcttcc cgatcgttga aattgtgctt gctgtttcaa
     1261 caggtttatt ggtatggtgg ctcgccggga aagcggcgtc aaacccgatc gcaaatgaaa
     1321 atcttgcggg cgaattggtt gcgtttattc tttacctcaa tcaaattttt cggccgttgc
     1381 gtgtgatcgc cgacaagttc aatgtaattc agatgggcgt tattgcagcc gaacgtgtgt
     1441 ttagagtttt ggataatgat gacgttacgc cgctcgcctc cgaagctgaa acttatcgtt
     1501 caccacagcg attg
//
LOCUS       DASQJI010000276         3755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_951337,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000276 DASQJI010000000
VERSION     DASQJI010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951337"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1408)
                     /locus_tag="VEV83_07705"
     CDS             complement(<1..1408)
                     /locus_tag="VEV83_07705"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HYK45036.1"
                     /translation="MKKILSVIGCLCLFLSCNKMNDVVALKDSQASQSVAAGFYLQTL
                     QVDDQTGNVNYYHIKINPTFKLQFSKPVDTSTVTANIQLKEGGLIIPVNFSYQASNSL
                     VVMKPKSALKYLTKYTLNINSGLTSAAQTTLGVNYTYTEITTIDSSDKFPRISNTKLL
                     NLLQKNTFNYFWIAGHPLCGMAKERFSSDVVTTGGTGFAIMSVPVAIERNFITRAEGL
                     ARVVKIANFLDVSAQKYHGAFAHWLNGNTGATIPFSAHDDGADLVETSYLMEGLLTAR
                     QYFNGSDSTETNLRKVINKLYKNVEWDWFRNGQNTLYWHWSPNYGWDTYQQVNGWNEA
                     LITYVMAASSPKHTIDSLTYANGWARNGAIVNGNVYYGVQLPLGPSNGGPLFFEHYSF
                     MGINPNGLTDPYANYQQQTLAHTQINYNYCVANPGRFNGYSDSCWGLTASDDNLHTYS
                     AHEPNNDDGVLTPTAALSS"
     gene            complement(1526..2368)
                     /locus_tag="VEV83_07710"
     CDS             complement(1526..2368)
                     /locus_tag="VEV83_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45037.1"
                     /translation="MKKTNDGFRIVIACTLLMSVMLLNSCSKNMQDKSAGQDNAISDA
                     TGAVQPVAIWNFDSSWNEAKQHLTGVPHQKAKFSKTSQAHLGKAAFLSPDSGYVSYDN
                     AGTALPNLTTGLTVDFWVFPQKASIEAHTIFCIPQTGAFWPTQHVITDAWSAPWGDTG
                     LVKVMFKANKAIDYNERWKEARIPHFFGKWNHIQYSYDGATSEYTIKINGVTYVDHEV
                     QYTDGTNTTLLGNLNPNPGSHGVVIGAFQNEWDPGLFGAAQPWMHWFAGRIDQLKIYN
                     TALF"
     gene            complement(2531..>3755)
                     /locus_tag="VEV83_07715"
     CDS             complement(2531..>3755)
                     /locus_tag="VEV83_07715"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK45038.1"
                     /translation="FTDALFCNELWKGYYGSLIYKCNVVLREVAHDSSGTSDDVKSLA
                     TAEARFIRGYAYFTMVRLFGNIPIIDTVLDIANSNVPQSDPAKVYAFIEQDLQYAAAH
                     LRPTWDAKFVGRATSGAANGLLAKVYLYEKKWDQAMSTAAIVINSGIYSLNPKYEDIF
                     KDAGENCSESVFEIQCYADANEKTAYGCQYADIQGVRGVGPQDLGWGFNNPSHQLHMA
                     YEPGDPRMNSTILFVPTPQPTVFGETYGRPEPNDSMYNMKVYLGNDPAIRTRVGGLEG
                     QHAWWENIRILRYADVVLIYAEAANELGNSTEALQKLEWIRARARAGNSSILPPVTTT
                     DQTQIRLAIQHERRIEFAMEHERFFDLVRWGIAADVFHAEGKLNFQAGRDELLPIPQA
                     QIDLSKGVLHQNPGY"
BASE COUNT          946 a          876 c          823 g         1110 t
ORIGIN      
        1 aagatgacag ggctgctgtt ggtgttaaaa ccccgtcgtc gttattcggc tcatgcgccg
       61 aatacgtatg cagattatca tcgcttgctg ttaagcccca gcaggaatca ctgtatccat
      121 taaaccttcc tggattggcg acacaataat tgtaattaat ttgtgtgtgt gcaagtgttt
      181 gctgctgata gtttgcatat ggatcagtca atccgtttgg attaataccc atgaacgaat
      241 agtgttcaaa aaacaagggt cctccgttag atggacccaa cggaagttgg acgccatagt
      301 aaacgttccc gtttacgatg gctccgtttc tcgcccagcc atttgcgtaa gtgagcgaat
      361 caattgtatg tttgggtgat gacgcggcca tcacgtaggt gatcaacgct tcattccatc
      421 cgttcacttg ttgatacgta tcccatccat aattcgggct ccagtgccag tacaatgtat
      481 tttgtccgtt ccggaaccaa tcccattcga cattcttgta tagtttgttg atgactttcc
      541 tgaggttcgt ttcggtgcta tcgcttccgt tgaaatactg ccgggctgta agcagacctt
      601 ccataagata agaagtttcc acaaggtcag cgccgtcatc atgcgcactg aaaggaatag
      661 tggcgccggt gtttccgttc agccagtggg cgaaggcacc atgatatttt tgtgcactca
      721 catcgagaaa gtttgcaatt ttcacaaccc ttgccaaacc ttcggctctt gtaataaaat
      781 ttctttcaat agcgaccgga acgctcatta ttgcaaagcc ggttccaccg gttgttacaa
      841 catctgaact aaatctttct tttgccatac cacaaagtgg atgacccgcg atccagaaat
      901 aattgaatgt gtttttctgc aacaggttaa gcaatttggt gttactgatc cgcgggaact
      961 tatcggacga atcgatcgtt gtaatctcgg tgtaggtgta gttaacgccc agagttgttt
     1021 gcgccgcaga tgttaggcct gagtttatgt tgagcgtata ttttgtcagg tatttcaggg
     1081 ctgattttgg tttcatcaca acgaggctgt tactagcctg gtaagaaaaa ttaaccggta
     1141 taatcaaacc gccttctttc agttgaatat tggccgttac ggtcgatgtg tcaacgggtt
     1201 ttgaaaattg tagtttgaag gtagggttga tcttaatgtg gtaatagttc acattgccgg
     1261 tttgatcatc gacctgcagt gtttgcaaat aaaatccggc tgcaaccgac tgagatgcct
     1321 gcgaatcctt caatgcgaca acatcattca ttttgttgca tgaaagaaaa aggcaaagac
     1381 aaccaataac cgaaagtatt tttttcatag attttcttta aaagataatt gtgattccag
     1441 acatattatt cgctccctca aaaatagaag aggcgtcttt ttgtaagacg cctctccaga
     1501 tgcatcacaa aatttgctaa ttcctttaga acaaagctgt gttatagatt ttcagctgat
     1561 ctatcctgcc cgcgaaccaa tgcatccatg gttgtgcggc gccaaacagt cctggatccc
     1621 attcattttg gaaggccccg atcacaacac catgtgatcc tggatttgga ttcaggttac
     1681 caagaagtgt tgtattggtc ccgtcggtat attgtacctc gtgatcaacg taagtcacgc
     1741 catttatttt tatcgtatat tcagaagtag cgccgtcata agaatactga atatggttcc
     1801 atttaccgaa gaagtgcggt atgcgagctt ctttccaacg ttcattataa tctattgcct
     1861 tattggcttt gaacatcact ttaaccaaac ctgtatctcc ccagggcgcg ctccacgcat
     1921 ctgtgataac atgctgagtg ggccaaaatg cgccggtttg aggtatgcaa aaaatagtat
     1981 gtgcctcaat acttgctttt tgtggaaaaa cccaaaaatc tacagttaag cccgttgtta
     2041 agttaggcaa tgcggtgccc gcattatcgt aagaaacata tccactgtct ggacttagga
     2101 aagcggcctt gcccaagtgc gcttgtgaag tcttcgagaa tttcgccttt tgatggggaa
     2161 cacccgtcag atgctgtttt gcctcattcc aggagctgtc aaaattccaa attgcaacag
     2221 gttgcacagc gccagtggca tcgctgatag cgttgtcctg accggcagac ttgtcctgca
     2281 tattcttact acaggagtta agtagcataa ctgacataag cagcgtgcaa gcaatcacga
     2341 ttctaaaacc gtcgtttgtt tttttcattt tttctttgtt tttataaaat tattgaatag
     2401 gtatgctgag acgaagaatg aaacgttttt taagggggcg agccccgaat attgatcaaa
     2461 tatatgacta gggtacgtct catgcgttgt tttctgggat tattgccaag aattattggc
     2521 gcagtccttc ttaatagccg ggattttgat gcaaaactcc ttttgacaaa tcaatttgcg
     2581 cttgtggtat cggaagcaat tcatccctgc ccgcctggaa atttagtttt ccttccgcat
     2641 gaaatacatc ggctgctatt ccccagcgaa ccaggtcaaa gaaccgctca tgctccatgg
     2701 cgaattcaat tcgccgctca tgttgtattg ccaatcttat ctgagtttga tctgtggtag
     2761 taaccggtgg caaaatagag ctattccctg cacgtgcgcg ggctctgatc cattcaagct
     2821 tttggagcgc ttccgtgcta ttccccaatt cgtttgcagc ttccgcatag ataagcacaa
     2881 cgtccgcata tcgcagtatt ctgatatttt cccaccaggc atgttgccct tccagcccac
     2941 cgacccgggt tcgtatcgcc gggtcattgc ccaggtaaac cttcatatta tacatagaat
     3001 cgtttggttc gggtcttcca tacgtttcac caaacacagt tggctggggc gtgggtacaa
     3061 ataatatggt gctgttcatt ctaggatcac cgggctcgta cgccatgtgc agttggtgcg
     3121 acggattatt gaaaccccag ccgagatctt gcggccccac acctcttacg ccctgtatgt
     3181 ctgcatactg gcatccgtag gctgtcttct cattggcatc ggcataacac tgaatttcaa
     3241 aaaccgattc gctgcagttt tcgcccgcat ccttaaagat atcttcatac tttgggttca
     3301 ggctgtatat gcccgagttg atcactatcg ccgcggtcga catcgcctgg tcccacttct
     3361 tctcatacag gtatactttc gccagcaagc cattggcagc gccactggtt gcccggccaa
     3421 caaattttgc atcccacgtt ggacgcaaat gtgctgccgc gtattgcaaa tcctgttcga
     3481 taaaagcata cacttttgcc gggtctgatt gaggtacgtt ggagtttgcg atatctaaaa
     3541 cggtatcaat aatggggata tttccaaaaa gccgcaccat cgtgaaatac gcataaccgc
     3601 gtatgaacct tgcttcagcg gtggccaaac tttttacatc gtcggaggtc ccgctcgaat
     3661 cgtgagccac ttcgcgcaac accacattgc atttgtaaat taaacttcca taatagcctt
     3721 tccacaattc gttacaaaag agcgcatcgg taaat
//
LOCUS       DASQJI010000277         4531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_797916,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000277 DASQJI010000000
VERSION     DASQJI010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4531
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797916"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..3406
                     /locus_tag="VEV83_07720"
     CDS             134..3406
                     /locus_tag="VEV83_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK45039.1"
                     /translation="MKKLLLISICAGMFAFAHAQKQVTGTVTDAKDNTPLAGVSIKLK
                     GTTRGTLTDANGEFKISVPDNAVLDVSIIGYTNKEVPVGNQSSLSITLAQGENVVEGV
                     VVTTALGVKRTRNQLPYSTQQVAGSDISKTRGDNFVSSLSGKVSGLEIRQSNTLGGST
                     NVVLRGFKSLTGNNQALFVVDGVPFDNSNTNNDNQLTGRGGFDYGSAAADINPDDIES
                     INVLKGAAATALYGSRAANGVIVITTKKGKKGLGITINSGVSFGKIDKSTFPTYQHTY
                     GANYGYLNGYGSPDNNFLYFDVNGDGTPDLVTPTQDDASWGAKFDPNLMVYQWDAFDT
                     SSAYYHTARPWVAGAHDPSTFFQTAVSINNNIMIEGGGDKANFKVGYTSNRDKGILPN
                     SEVDKDLVNLNANFNVTDRLSAFANVNYSKITGLGRYGNGYGPNNIMSNFRQWWEMNL
                     DINELKDAYFRHRQNVTWNWADPSDEENGLRPIYWDNPYWSRYENYETDRRDRWFGNV
                     GLNYKLTDWISIMGRISMDSYNELQEERVAVGSIGQFIAGQLTTDINGEPSGYSKFDR
                     TFRETNYDLLINFDRDLTQNLNLKALLGGNIRQNYVSSTQAKTNGGLVVPGFYSLSNS
                     LNAVNPPVESLTQLEVDGIFGGATLSYKDMLILDATLRRDRSSTLPPENNTYYYPSVS
                     GGFVFSKLLSVPWLSYGKVRANYAEVGNSAPALSVYDTYVHDHNDVAFGTATLFSVPD
                     TKNNEELKPERTKSWEFGTELSFLKNRLGVDLTFYDTKSVDQILPVGVSTATGYLYEY
                     VNAGVIQNKGVELTLNGTPVKSKNFSWDIVVNWSRNRSKVLSLYDTSENLLITTFQSD
                     VTLNATIGQPYGTLRGSNFVYLNGQRVVGDNGYYEESPTANEVIGNINPDWIGGISNT
                     FKYKNLSFSFLIDVRQGGDVHSLDLYYGLATGLYPETAGLNDLGNPVRNTIDEGGGII
                     YPGVTADGKPNTQRVDISGLFGAYGYFRNPSAAFIYDASYVKLREAVLTYALPAKLMQ
                     KLHPIKGINLSVVGRNLWIIHKNLPYADPEETTSSGNIQGLQTGAYPTVRNIGFNLNV
                     KF"
     gene            3417..>4531
                     /locus_tag="VEV83_07725"
     CDS             3417..>4531
                     /locus_tag="VEV83_07725"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HYK45040.1"
                     /translation="MKNIFIIAALAYIFTGCKKDFGDMNRDKKNPAIVPSYTLFSNAQ
                     KNMAYMLADADPNNNIFRLISQQWTQTTYTDESNYDLNTRAVPDNWWTVFYKDCLRDF
                     DEARKLIPTDVKDPATQQNELAIVDIQQVYIYQILVNTFGDIPYTSALDASILFPPYD
                     DAATIYDDLLSRLDADIAALDPDAGTFNDGADLIYNGDINKWKKFANSLKVVMGMILS
                     DVDPAKAESIVEAAAPGAFTSNDDNAVFNFLSSPPNTNPVWVNLVQSGRNDYIPASTI
                     IDLLEDLNDPRLSLYFTEDPHNGYSGGIPGSGNNFSSFSHVTDAQTEPDAPYVLLDYA
                     QVEFNLAEAAARGMNVGGTAEEYYNKAITASILSWGGT"
BASE COUNT         1305 a          974 c         1063 g         1189 t
ORIGIN      
        1 gtgacaaaaa aatttcgttc ctccattttc cctcttcagt caactttttt cagcgttcgg
       61 tttttttggc gtttttctca ctgcaatatt tcttttccga attgtcatgt tctgaaaggc
      121 aaaacaaatc attatgaaaa agctgctgct catttcaata tgtgcaggca tgttcgcatt
      181 cgcccatgca cagaagcagg ttacaggaac tgtaacagat gcaaaagaca atacacctct
      241 cgcgggggtt tccattaaat taaaaggcac cacaagaggc acactcaccg atgcaaacgg
      301 agaattcaag atctccgttc ccgacaacgc cgttctcgat gtatcaatta tcggttacac
      361 aaataaagaa gtgccggtag gcaatcagtc ttctttatct ataacgctgg cgcagggcga
      421 aaatgttgtc gagggcgtag ttgtgaccac tgcgctcggt gtgaaacgaa caagaaatca
      481 acttccttat tcaacgcaac aggtcgcggg cagcgacata agcaaaacga gaggcgacaa
      541 ttttgtcagc tcgctttctg gtaaggtatc gggtttggaa ataaggcaga gcaatacact
      601 cggcggttca accaacgtgg tgctgcgcgg ctttaagtca ttaacgggca acaaccaggc
      661 actgttcgtt gtggacggcg taccgtttga caattccaac accaacaacg ataaccagct
      721 aaccggtcgc ggcggttttg attatggaag cgctgcagcg gatatcaatc ccgatgacat
      781 cgaatcgatc aatgttttga aaggtgctgc ggccaccgct ctttacggat cacgcgcagc
      841 aaatggtgtt atcgtgatca ctacaaaaaa aggaaagaag ggtttgggca ttacgatcaa
      901 ttcaggtgtg agctttggca agatcgataa aagcactttc ccaacatacc aacacacata
      961 cggcgcgaac tatggttacc tgaatggata tggttcgcct gataacaact ttttatattt
     1021 tgatgtaaat ggagacggca cgcccgactt ggtaacacca acgcaggacg atgcttcgtg
     1081 gggcgcaaaa tttgatccta acctgatggt gtatcaatgg gatgctttcg atacatcttc
     1141 tgcttattac cataccgcac ggccgtgggt tgccggcgct cacgacccgt caactttttt
     1201 tcaaacagcc gtatctatca acaacaacat catgatagaa ggcggtggcg ataaagcgaa
     1261 ttttaaagta ggttatacca gcaacaggga caaaggaatt ttaccgaaca gcgaagttga
     1321 taaagacctt gtgaacctga atgcaaattt taatgttact gaccgcttgt ccgcattcgc
     1381 taacgtcaat tattcgaaaa taacggggct cggaagatat ggcaatggct atggccccaa
     1441 taatatcatg tcaaatttca ggcagtggtg ggaaatgaat cttgacatca atgagctcaa
     1501 agatgcgtat ttccgccata ggcaaaatgt gacgtggaac tgggctgatc cttcagatga
     1561 agagaacggc ctgcgtccaa tttattggga caatccttat tggagcaggt atgaaaatta
     1621 tgaaacggac agaagagaca ggtggtttgg aaacgtgggc ctcaactaca agcttaccga
     1681 ttggataagt atcatgggac gcatatcgat ggattcgtat aatgagctgc aggaagaacg
     1741 tgttgccgtc ggaagtattg gccagttcat cgcaggacag ctaacgacag atattaacgg
     1801 cgagccttcg ggttattcaa agtttgacag gacattccgt gaaacgaatt acgacctgct
     1861 gataaatttt gacagagacc tcacgcagaa tcttaacctc aaagcattac tcggtggcaa
     1921 catcaggcaa aattatgtgt cttcaacaca ggcaaaaacg aatggaggtt tggtggttcc
     1981 cggtttctat tctttgtcga attcgctcaa tgccgtgaac ccgccggtgg aaagtttgac
     2041 gcaacttgaa gtggacggaa tatttggcgg cgctacgttg tcatataaag acatgctgat
     2101 cctggatgca acgttgagga gagatcgttc ttctaccctg cctcctgaaa acaataccta
     2161 ttattatcct tctgtttcgg gtggcttcgt cttttccaaa ctactgtctg ttccatggtt
     2221 gagttatggt aaagtgagag ctaactacgc tgaagttggt aacagcgcgc ctgcattgag
     2281 cgtgtacgat acttatgtac acgatcataa tgatgttgct tttggaacag ccacattgtt
     2341 ttctgttcct gatacaaaga acaacgagga attgaaaccg gaaagaacaa agagctggga
     2401 attcggaacc gagttgtcgt tcctgaaaaa caggcttggc gtcgatctta ctttttatga
     2461 tacaaaatca gtggaccaga tattgcctgt cggtgtatcc accgcaaccg gatacctgta
     2521 tgagtatgta aatgcgggtg tgatccagaa taaaggcgtt gaattgacct tgaatggcac
     2581 accggtaaaa tcgaaaaact tttcatggga cattgttgtg aactggtctc gtaacagaag
     2641 caaggtgttg tctttgtatg atacttcgga aaatttgctg atcacaactt tccaaagcga
     2701 tgttacattg aatgcaacaa ttggacaacc gtatggcaca ttaagaggtt caaactttgt
     2761 ttatctgaac gggcagagag ttgttggaga caatggttat tacgaggagt ctccaactgc
     2821 aaacgaagtg ataggaaata tcaatcccga ttggatcggc ggcatatcaa acacctttaa
     2881 atataaaaat ctctcgttta gttttttgat cgatgtgaga cagggtggag acgttcattc
     2941 acttgatctg tattacggat tggctacggg tttgtatccg gaaacagcgg gattaaatga
     3001 tcttggcaat cctgtaagaa acacaattga tgaaggcggt ggaattattt accccggcgt
     3061 aacggcggat ggcaaaccaa atacacagcg cgttgacatc agcggattgt tcggtgcata
     3121 tggatatttc cgtaatccgt cggctgcatt tatttatgac gccagttatg taaagcttcg
     3181 cgaagccgtg ctcacctacg cgttgcctgc gaagctcatg caaaagctgc atccgatcaa
     3241 gggcatcaat ctgtcggtag ttggcagaaa tctttggatc attcacaaaa atcttcctta
     3301 cgctgatccg gaagaaacaa cgagctctgg taacatacag ggcttgcaaa ccggcgcata
     3361 tcctaccgtg cggaatattg gatttaatct caacgtaaaa ttttaattca atcgtcatga
     3421 aaaatatatt catcattgca gctttggcat acatctttac aggttgcaaa aaagatttcg
     3481 gcgacatgaa ccgggataaa aaaaatcctg cgatcgttcc ttcatatact ttgttttcca
     3541 acgcgcaaaa gaacatggca tatatgcttg ccgacgcgga cccgaataat aatatctttc
     3601 gcctcatctc ccagcaatgg acacagacta cgtacaccga tgaaagcaat tatgatctga
     3661 atacacgtgc ggttccggat aactggtgga ctgtctttta taaagattgc ttacgcgatt
     3721 ttgacgaagc aaggaagctg atcccgactg acgtaaagga tccggccacg cagcaaaatg
     3781 agttggcgat cgtcgacatt cagcaagtat acatttacca gatcctggta aacacatttg
     3841 gcgatattcc ctacaccagc gcgcttgatg caagtattct ttttccaccg tacgatgatg
     3901 cagctaccat ttatgatgat ctgttgtcga ggctcgatgc ggatattgca gcgttggatc
     3961 ccgatgctgg aacgtttaac gacggagctg atcttattta taacggcgac ataaataaat
     4021 ggaaaaaatt tgcgaactcg ctaaaggtgg taatgggaat gatactgtca gatgtcgacc
     4081 cggcgaaagc agaatccatt gttgaagcag cagcgcccgg tgcatttact tccaacgatg
     4141 ataatgcagt gtttaatttt ctttcgtctc ctcctaacac aaacccggta tgggtgaatc
     4201 ttgttcaaag cggcagaaat gattatattc ctgcaagcac aattatcgac ctccttgaag
     4261 atctgaatga tccgaggctg tcattgtatt ttaccgaaga ccctcacaac ggatacagcg
     4321 gtggcatccc cggcagcggc aataatttct ccagcttttc tcatgtcacc gatgcgcaaa
     4381 cagaaccgga tgcaccatat gttttgcttg attatgcgca ggttgaattt aacctggcag
     4441 aagcagcagc aaggggaatg aatgtcggcg gcactgcgga ggagtattac aacaaagcga
     4501 tcaccgcatc cattttgtcg tggggaggaa c
//
LOCUS       DASQJI010000278         3051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2180024,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000278 DASQJI010000000
VERSION     DASQJI010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2180024"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..2601)
                     /locus_tag="VEV83_07730"
     CDS             complement(226..2601)
                     /locus_tag="VEV83_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45041.1"
                     /translation="MFRNYLKIAWRNLMKNKIFSFINILGLTIGITVCMMIFLFIMNE
                     FSVDKFHTQGNNIYRVMRSYDQSKQAGPWLSGPYATALLNDFPGEIKQATRVMPSNDL
                     VAFGNTSFNEKKVYWADPNFFSMFSFPLLRGSAATVLKEPGSVVLTATTAKKYFGNID
                     NAMGKVLQMDKEFQMKVTGIAKDVPSNSHLYFDLVVPLSNFYQAEWFGKWMNNNNFTY
                     VLLDPHASKDALEKRFPQFMDKYIGTNMQEMGTRFSLQLMPLKDVYFAPGGDFDPIKH
                     GDKTVVYIFLSIAVLILLIACINFMNLSTIRAVERSKEVGLRKMMGALRNNLIWQFIG
                     ESILLTLVSCVLSVGLLLLLMPSYNQLLGYTLSVSWSSLPIYAFLAAVILIVGFLAGS
                     YPAFFLSSFSPIESLKGKLRLGKGGSFFRQTLVVVQFAISVFLIIGTIVIAKQMSYVK
                     NKQLGYDQDQTVVVPIDNGDIYQHMYTFKNELLNKGNVASVSLMSGEPGGFFDDFTFD
                     VEGQRDVWKARSEFADFEIVKTLGLKIIAGRNFSPAYATDSSDAVLINRTAASKLGFT
                     PEQAVGKWIRNTVRDSLRRRVIGVVEDFNFLSLKENMDALVIAPNEDRRVAVIRLKPG
                     NIQAGLATIKSEYQKVAPVYPFEYSFLDQKFDQLYKADIRQQNIITIFSALAIFIACL
                     GLFGLASFTAAKRIKEIGVRKVLGSSTENIVMLLSKDLLKPVLLAAIIAIPVAYYAMH
                     NWLENFAYRTPLQWWIFVVAALITVAIALITVSIKAVRAAIANPVDSLRTE"
     gene            complement(2686..>3051)
                     /locus_tag="VEV83_07735"
     CDS             complement(2686..>3051)
                     /locus_tag="VEV83_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK45042.1"
                     /translation="IFAGIAIFISCLGLYGLVSFMAVQRTKEVGIRKVLGASARHIVF
                     LLSKEFTILILIAFVLSAPVAWYIMHQWLQNYTYRIPLSASIFILAIISSVIIAWITV
                     GHRAIQAAMANPVRSLRTE"
BASE COUNT          857 a          713 c          644 g          837 t
ORIGIN      
        1 acgaatttaa acttgcggct gcgcctttct ctcttataac agccaccaga agatcatagt
       61 tagacatagc ttgcagtttt taagatttac gatttaggat tgcagattgg cgattgcaga
      121 ttgcagattt gccacgcatt cactcattac tcatcactca ttttattact catgctcttt
      181 catcttcaac agccattcac tattcaccat tgaccattca cctcatcatt ccgttcttaa
      241 actatctacc gggttcgcga tcgcagctct tactgcctta atgcttacag tgatcaacgc
      301 gatcgcaaca gtgatcaacg ctgcgaccac gaatatccac cactgcaaag gcgtgcggta
      361 tgcgaagttt tcaagccagt tgtgcatcgc gtaatacgca actggtatcg cgatgatcgc
      421 tgcgagcagc acgggcttca aaaggtcttt cgataacagc attacaatat tttcggttga
      481 cgaacccagt acttttctca ccccaatttc ttttatgcgt ttcgcggcgg taaatgaagc
      541 cagtccaaac aagccgaggc atgcaataaa aatggcgagt gctgaaaata tggtgatgat
      601 gttttgttgc ctgatgtcag ctttgtacaa ctggtcaaac ttttgatcca ggaagctgta
      661 ttcaaatgga tatacgggag caaccttttg gtattcactt ttgatggttg ccaggccggc
      721 ctggatattt ccgggtttca acctgatgac cgctactctc ctgtcttcgt tgggcgcaat
      781 aacgagcgcg tccatatttt ctttaagcga gagaaaatta aaatcctcga ctactccgat
      841 gacacgcctt cttaaactgt cgcgcacggt gtttcttatc catttgccaa ccgcttgttc
      901 aggtgtaaat ccaagcttcg aagcggcggt tcggttgata agcactgcat ccgaagaatc
      961 tgttgcataa gcaggagaaa agtttctgcc tgcgataatt ttcagtccca gtgtttttac
     1021 aatttcaaag tcagcgaatt ctgatcttgc tttccataca tcccgctgtc cttctacgtc
     1081 gaacgtgaaa tcgtcaaaga agccgcccgg ctctccggac atcaatgaca ccgatgcaac
     1141 gttgccttta tttagcaatt cgtttttgaa ggtgtacatg tgctgataaa tatcgccgtt
     1201 gtctatcggg acaactacag tttgatcctg gtcatatccg agttgcttgt tttttacgta
     1261 actcatttgc ttcgcaataa cgatggtgcc gatgataaga aaaacagaaa tagcgaactg
     1321 caccacaacg agtgtttgtc ggaagaaaga gccgcctttg ccgagcctta attttccttt
     1381 caatgattct atgggagaaa aggacgacag gaagaacgcc gggtaacttc cggccaaaaa
     1441 tcctacgatc aatataacag cagccaggaa ggcgtagatc ggtaaagaac tccacgaaac
     1501 tgagagcgta taaccgagca actggttgta cgatggcatg agcaagagca acaagccaac
     1561 agacaggacg cacgaaacga gtgtcagcaa aatagattca cctatgaatt gccagataag
     1621 attgtttcgc aatgcgccca tcattttacg caagccgact tcttttgagc gctccacggc
     1681 gcggatagtg gaaaggttca tgaagtttat acacgcaatc agcaggatga gcacagcaat
     1741 ggaaagaaaa atatatacaa ccgttttatc accgtgcttg atcgggtcaa aatcgccgcc
     1801 aggtgcaaaa taaacatcct tcaaaggcat aagctgaagc gagaaacgag tgcccatctc
     1861 ctgcatgttg gtgccaatat atttatccat gaactgcggg aaacgttttt caagcgcgtc
     1921 tttgctggca tgcgggtcga gtaaaacgta agtaaagttg ttattgttca tccatttgcc
     1981 gaaccactcc gcctggtaaa aattagaaag aggtacgacc agatcaaaat acaggtgtga
     2041 gttcgatgga acatctttag caatgccggt aactttcatc tggaactctt tgtccatttg
     2101 cagcactttg cccatcgcgt tgtcgatatt gccgaaatac ttttttgccg ttgttgccgt
     2161 tagcactaca cttcccggct ctttcaaaac ggttgccgcg ctgcctcgta gcagtggaaa
     2221 tgaaaacatg ctgaagaaat tcggatctgc ccaataaacc tttttttcat tgaatgaagt
     2281 attgccgaat gcgaccaggt cattcgaagg cattacacgc gtggcttgtt taatttctcc
     2341 ggggaaatcg tttaacaggg cggtggcgta gggaccggaa agccacggac cagcttgttt
     2401 cgactggtca tagctgcgca ttaccctgta aatgttattt ccctgcgtgt ggaatttgtc
     2461 aacactaaat tcattcatga tgaaaagaaa gatcatcatg cacacagtaa tgccgatcgt
     2521 taacccaagg atattgatga atgagaagat cttattcttc atcaaattcc gccatgctat
     2581 ttttaaataa tttcgaaaca tgattaacta tttcagattg aagattgcag atttttaatt
     2641 cctaactctc aattcctaat tcccaattcc caattcctaa ttctctcatt ccgttctcaa
     2701 gctcctcacc gggttagcca tcgcagcctg tatggcacgg tgaccaaccg ttatccatgc
     2761 aatgatcacc gaactgatga tcgcaagtat gaatatggat gcactcaacg gaattctgta
     2821 tgtataattt tgcagccatt gatgcatgat gtaccatgca accggtgcag aaagcacaaa
     2881 tgcgatgagg atgagtattg taaattcctt cgacaacaaa aaaacgatgt gccgtgccga
     2941 cgcgccaagc accttacgaa taccaacttc ctttgtacgt tgcaccgcca tgaacgaaac
     3001 aagtccgtat aagcccaggc aactgataaa aattgcaata cctgcaaaaa t
//
LOCUS       DASQJI010000279         5181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_490384,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000279 DASQJI010000000
VERSION     DASQJI010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5181
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490384"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1285
                     /locus_tag="VEV83_07740"
     CDS             <1..1285
                     /locus_tag="VEV83_07740"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HYK45043.1"
                     /translation="KRRMLLLGNDGNYDIVITEIGGTVGDIESLPFIEAVRQLEWELP
                     EEDVCVIHLTLIPYLRAAKELKTKPTQHSVKMLSETGVHPDILVCRTEEPLSNDLKRK
                     IALFCNVKVEAVIEALDASTIYEVPLAMLREKLDIICLRKLNTTLVPEADLSKWKTFL
                     DKLKYPKSKVSIGLIGKYMELQDAYKSILESFIHAGAVNEVKVQVVNLHSESINAVNV
                     KEKLEGLDGLLVAPGFGSRGIEGKIIAVQYARENNLPFFGICLGLQMAVIEFARNVLG
                     IEHAHSTEMDPQTTDPVIDMMEEQKKIKLMGGTMRLGSYPCEIKEGTLAHRIYGKTLV
                     SERHRHRFEFNNHYLEQFESNGMIASGINPESSLVEIMEVTDHPFFIGAQYHPELKST
                     VEKPAPLFVHFVEAAKNYNEQRISYKNPLLQSEMI"
     gene            complement(1298..1747)
                     /locus_tag="VEV83_07745"
     CDS             complement(1298..1747)
                     /locus_tag="VEV83_07745"
                     /inference="COORDINATES: protein motif:HMM:NF024861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HYK45044.1"
                     /translation="MGTLKGETWLIISLLIQKCFLTSWLSARPFFAESFQLFKAQYNN
                     QAQLCSTASVISNVQYGGNKLLGKMSPGAAVQKLLSFVKICVTDKRTIVKAYNSPFGD
                     VEDAVQYYSAVADNSIDFFVTRNVKDFKHADEHLKVITPGEGVKILG"
     gene            complement(1714..1965)
                     /locus_tag="VEV83_07750"
     CDS             complement(1714..1965)
                     /locus_tag="VEV83_07750"
                     /inference="COORDINATES: protein motif:HMM:NF039417.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6364 family protein"
                     /protein_id="HYK45045.1"
                     /translation="MTRKLTLSLDDKIIAKAKKIAAREKTSISKIVSNYFEKLPDEES
                     KKNPAVLIGLLRPKNKSAAAIENAIENARWEHLKEKHGL"
     gene            2111..4300
                     /locus_tag="VEV83_07755"
     CDS             2111..4300
                     /locus_tag="VEV83_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYK45046.1"
                     /translation="MRIRRVISLLLIVGPVVTISAQPPRGIHWSADGNSYYNASTDGI
                     KKVKLPSFDSSVVVTAQQLTPADSSKPLKVRNFFFSDDGKKLLIYTNSKKVWRYDTRG
                     DYWILNTTDNSLHKLGKNLPASSLMYAKFSPDGDRVAYVSGHNLFVEDIRAGTVQQLT
                     KDGTDRMINGTFDWVYEEEFDCRDGFRWSPDGKSIAYWKVDATKIPNFLMINNTDSAY
                     SFVKPVEYPLVGVDPSPCYVYVVNVATAKSTKMNVPGDPQQHYIPRMEWAANSSELVL
                     EQFNRKQNAIVIMYCDASTGAAKQIYTESDKAWVDNKNAWVAASRGAPVDPSGWEWVK
                     NGNAFLWVSEKDGWRHVYLISRDGKNETLITNGEYDIINLKGYDDKSGYVYFTASPDN
                     ATQNYLYRTTLDGKGKAERLSPANENGTHEYDLSPNGIYAVHQFSNLNTAPIRDWVQL
                     PAHTIIQAITTQNNPPKHHVELFRLTTDDGITMDGWIVKPTNFDSTKKYPVLFSVYTE
                     PAAQTVIDRYRGANNSLYNGDLSDDGYIYISVDGRGTPAPKGAAWRKAIYRNIGRVNI
                     RDQAMAAKKILQWPFVDTSRVAVWGWSGGGSATLNCMFQYPEIYKTGIAIAAVTNQLT
                     YDDIYQERYMGLPQENKEDFLAGSPITYAKNLQGHLLIIHGTGDDNVHYQNEELLLNE
                     LIRYNKLFQFMPYPNRTHSISEGEGTTRHLNNLYTTFLRQYCPPGPR"
     gene            4426..>5181
                     /locus_tag="VEV83_07760"
     CDS             4426..>5181
                     /locus_tag="VEV83_07760"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYK45047.1"
                     /translation="MKHIHHISFNTRKGNLFPLSLSVFHKPFHLEFNKPVVIIAGDNG
                     CGKSTLLEAIAHKLNLPTIGSYSTITDGTFEAARSLSDFITVHWKNKTPNGMFFRAED
                     YIGFVRSVNTLKNDLQGDIKEMEEYLRGEGLHRARSALKGQINELESRYNGNMEQKSH
                     GEGFLQIITSRIVSNGIYVLDEPEASLSPMKQLSLISLLMHSAEETDAQFVIATHSPV
                     LMGIPNSQIYFLNDEGIAALEYEETEHYQIYKSF"
BASE COUNT         1569 a         1085 c         1180 g         1347 t
ORIGIN      
        1 caagcggcgc atgctactgc tggggaatga cggcaattac gacatcgtga tcaccgagat
       61 cggtggaact gttggcgaca tagaaagcct tccttttatt gaagcagtcc gccagcttga
      121 atgggaatta cccgaggaag atgtttgcgt tatccatctc acattgatcc catatctgcg
      181 tgccgcgaaa gaattaaaaa caaaaccaac ccagcacagc gtaaaaatgc ttagtgaaac
      241 aggggtgcat ccagatatcc ttgtgtgccg gacagaagag cctcttagca atgaccttaa
      301 acgcaagatc gcgctgtttt gtaacgtaaa agttgaagct gtgatcgaag cactcgacgc
      361 ctctactatc tatgaggtgc cgcttgcgat gctgcgtgaa aagctggaca ttatttgttt
      421 gcgaaaatta aatacgacgc ttgtacctga agctgatctt agcaagtgga aaacattttt
      481 ggacaagtta aaatatccaa aaagcaaagt aagtattggc ctcatcggca aatacatgga
      541 gcttcaggat gcatataaat ctatcttaga aagtttcatc catgccggcg ccgttaatga
      601 agttaaggtg caggtagtaa atctgcacag cgaatccatt aatgcggtca atgtgaaaga
      661 gaaattagaa ggacttgacg gtttgctcgt agctccggga tttggttccc gcggcattga
      721 gggaaaaatt attgctgtgc aatatgcacg tgaaaataac ctgccgtttt ttggaatttg
      781 cctcggcttg caaatggccg tcatcgaatt cgcgcggaat gttttgggaa ttgaacatgc
      841 gcattcaacg gaaatggatc ctcagacgac ggacccggtg atcgatatga tggaagagca
      901 aaagaagata aagttgatgg gcggcaccat gcgactgggc tcttatccat gtgaaataaa
      961 ggaaggcact ctagcccatc gcatttacgg aaaaacactg gtaagtgaac ggcatcgcca
     1021 ccgctttgaa ttcaataatc attatctgga gcagtttgaa agtaatggca tgatagcaag
     1081 cggcattaac cccgaatctt cgctcgttga aattatggaa gtaacagacc atccattttt
     1141 tattggcgca caataccacc cggaattgaa aagcaccgtg gaaaaaccag cgccattgtt
     1201 cgtgcatttt gtggaagctg caaaaaatta caacgagcaa cgcatttcgt ataagaatcc
     1261 gctattgcaa agcgagatga tataacttac ccgatcatca acccaaaatt tttacacctt
     1321 cgccgggggt aattactttc aagtgctcgt ctgcgtgttt gaaatccttt acgtttcttg
     1381 ttacaaagaa atcaatagaa ttgtcagcga cagccgaata atattgtaca gcatcttcta
     1441 catcgccaaa aggggaattg taagctttta caatcgtccg tttatcggta acgcaaattt
     1501 tcacaaatga aaggagtttt tgcacagctg cccctggcga catttttcca agtaatttgt
     1561 taccaccgta ctggacgttc gagatgactg atgctgtgct gcaaagctgc gcctggttgt
     1621 tatattgggc tttgaacaat tgaaaacttt ccgcaaagaa tggccttgcg ctcaaccacg
     1681 acgtcaagaa gcacttctga atcaacaaag aaattataag ccatgtttct cctttaagtg
     1741 ttcccaccgt gcattttcta ttgcattttc tatcgcggcc gcagatttgt ttttgggcct
     1801 tagaagccca atcaaaacag ccgggttttt cttactttcc tcatccggta atttttcaaa
     1861 ataattggac acaattttag aaatacttgt cttttcccgg gcggcaattt tttttgcctt
     1921 cgcaataatt ttatcgtcca ggcttaatgt aagtttcctg gtcatcccgc tgttttttta
     1981 aagatacgta aggccccgcg ctacatgtaa tataaaattt cgataaatgg ttcttggatt
     2041 atatcttgat actttacttt cgagcctctt ttttcgactc aaacaacgat tgctcataaa
     2101 agaaatcata atgagaatac gtagagtaat tagcctgctt cttattgtag gtcctgttgt
     2161 aaccatatca gcacaaccgc cgcgtggcat tcactggtct gccgatggaa atagttacta
     2221 taacgcttct accgatggaa tcaaaaaagt gaaactgcct tcattcgatt ccagtgttgt
     2281 tgtaaccgcg cagcagctta caccggcaga ttcatcgaag ccgctgaaag tgcgaaactt
     2341 ttttttctct gatgacggaa aaaaattgct gatctacacg aatagcaaaa aagtatggcg
     2401 ctatgataca cgcggagatt attggatctt aaataccacg gataacagtc tgcacaaact
     2461 cggaaaaaat ttgccagcgt cttcattgat gtatgcaaaa ttttctccgg atggagaccg
     2521 tgtggcttac gtgagtggtc ataatctttt tgtggaggat ataagggcgg gcaccgtgca
     2581 gcagctcaca aaagatggta ccgaccgcat gatcaatgga acttttgact gggtgtatga
     2641 ggaagaattt gattgccgcg acggttttcg ttggagccct gatggtaaaa gcattgccta
     2701 ttggaaagtg gatgcaacga aaattccgaa ctttttaatg atcaataata cagactcggc
     2761 atattcattt gtaaaacctg tcgaatatcc actggttgga gttgatcctt cgccttgtta
     2821 tgtttacgtc gtaaatgttg ccacggctaa atcaacgaag atgaatgtgc ccggagatcc
     2881 gcaacaacat tatattccgc ggatggaatg ggctgctaac agttccgaac tggtcctgga
     2941 acaatttaac cgcaagcaaa atgctatagt cattatgtac tgcgatgcaa gcaccggtgc
     3001 cgcaaaacaa atttatacgg agagtgataa agcatgggta gataataaaa atgcgtgggt
     3061 ggcagcctca cggggcgccc cggtggaccc gtccggttgg gaatgggtaa aaaatggaaa
     3121 tgcatttttg tgggtgagtg agaaagatgg atggcggcat gtatatctca taagccgcga
     3181 tggcaaaaac gaaacgctga tcacaaatgg agagtatgat atcatcaacc taaaaggcta
     3241 cgatgacaaa agcggatatg tatatttcac tgcttcgccc gacaacgcga ctcagaatta
     3301 tttgtatcgc acaacgctgg atggaaaagg caaagccgaa cgtttgtcgc ccgcgaatga
     3361 aaatgggacg cacgagtatg atctttcacc aaacggtatc tatgcggttc atcaattttc
     3421 aaatttaaat acggccccga taagagattg ggtgcaactt ccggcacata cgatcataca
     3481 ggcaataacg acgcagaata acccaccgaa acatcacgta gaactgttca ggttaacgac
     3541 tgacgatgga ataaccatgg atggatggat cgtaaaaccg acaaattttg attcgacaaa
     3601 aaaatacccg gtattatttt ctgtatatac tgagccagcc gcgcaaacgg tgatcgacag
     3661 atacagagga gccaataata gcttatacaa tggcgatctt tctgatgacg gatacatata
     3721 tataagtgtt gacggaagag gaacgcctgc accgaagggc gccgcatggc gcaaagcgat
     3781 ttatcgaaac atcggacgcg tcaacatccg cgatcaggca atggccgcaa aaaagatcct
     3841 gcaatggcca ttcgttgaca caagtcgtgt cgctgtgtgg ggatggagcg gaggaggatc
     3901 ggctacactc aactgcatgt tccaatatcc tgagatatac aagacaggta ttgctatagc
     3961 cgcagttaca aatcagttaa cgtatgacga tatctaccag gagcgttata tgggcctgcc
     4021 gcaggaaaat aaagaagatt tcctggccgg ttcgccaatc acttatgcaa aaaatttgca
     4081 aggacattta ttaattatac atggaacggg cgacgataat gttcactatc aaaatgaaga
     4141 acttttgctc aacgagctga tcaggtataa taaattattt cagttcatgc cgtatccaaa
     4201 ccgtacgcac agcatttccg aaggagaagg cacaacgagg cacttaaata atttgtacac
     4261 tacattcctc aggcaatatt gcccgcccgg cccgagataa ttatttatac aaggacgaca
     4321 aggtggacgg acagtgagat tgctgagaaa actatgtttg gtatgaaacc cgcaccagat
     4381 agttcaaatt gctgtggatg gcagtaaatt cgttgcgaag atccggtgaa acatattcat
     4441 catataagtt tcaatacgag gaaaggcaat ctttttccct tatcgctgtc cgtatttcat
     4501 aaaccatttc atctggagtt taataaacct gttgtaatca tcgctgggga caacggctgc
     4561 ggaaaatcga cgttgcttga agcgatcgct cataagctaa accttccaac catcggcagt
     4621 tattcaacaa ttacggacgg aacttttgaa gctgcaagat cattgtcaga tttcatcacc
     4681 gtgcattgga aaaacaaaac accaaacgga atgttctttc gcgctgaaga ttatattggg
     4741 tttgtgcgaa gcgtgaatac gttgaaaaat gatctgcagg gcgatatcaa agaaatggaa
     4801 gagtatttaa gaggcgaagg actccacagg gcccgtagtg ctttgaaagg gcagatcaac
     4861 gaactcgaaa gcaggtataa cggcaacatg gagcaaaaat cgcacggcga aggttttttg
     4921 caaatcatca cttcacgtat cgtatccaac ggcatatatg tgctggacga accagaggct
     4981 tcgctgtctc caatgaagca attgtccctg atctcactgc tgatgcattc ggctgaagaa
     5041 acagatgcgc agttcgtgat agcaacacat tcgccggtgc taatgggcat accaaacagc
     5101 caaatttatt tcttaaatga cgaaggaatt gctgctttgg aatacgagga gacagagcat
     5161 taccagatct acaaatcatt t
//
LOCUS       DASQJI010000280         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2334124,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000280 DASQJI010000000
VERSION     DASQJI010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2334124"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1622)
                     /locus_tag="VEV83_07765"
     CDS             complement(<1..1622)
                     /locus_tag="VEV83_07765"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HYK45048.1"
                     /translation="MKIALAQQNYLIGDFENNTKKIIAAVEEAKKHNADLVMFTELCV
                     CGYPPRDFVEFNDFINKCYAAIDEIKEHADTIAVLVGSPARNPVIEGKDLFNAAFFLY
                     EKEIKAEIHKTLLPTYDVFDEYRYFEPSFEWNIVPFKGKRLAITICEDIWNLGDNPLY
                     RICPMDALMQQHPDLMLNISASPFDYTHHEDRKAVIKLNVVKYKLPMFYCNAVGSQTE
                     IVFDGGSLVFDKNANLCKALPNFEEGIEYAELNDDGTISGPMLATAEQIPNTELAVKE
                     FQPDLNLAHVYNALTMGIRDYFRKMGFSKAILGSSGGIDSAVVLSLACEALGSENVRA
                     ILMPSPYSSEGSVNDAVQLSKNLNNPYDIIRIDPIYENFLCSLKPVFKDLPFSIAEEN
                     IQSRTRGNLLMAIANKFGYILLNTSNKSELATGYGTLYGDMAGGLSILGDCYKLQIYE
                     LAKYINRNKEIIPATIIHKPPSAELRPDQKDTDSLPDYSILDKILYQYIERRLGPSEI
                     KSLGYDPATVDRVLKLVNTNEYKRNQFCPIIR"
BASE COUNT          421 a          362 c          360 g          493 t
ORIGIN      
        1 atacggatga tcgggcaaaa ctggtttctc ttgtattcat ttgtgtttac cagtttcaaa
       61 acacggtcaa cggtggcagg atcataaccc aatgacttta tttcggaagg gcctaatctt
      121 ctttcaatat actggtacaa tatcttgtcg aggatactat aatcgggcag actatctgta
      181 tccttttgat caggtctcag ctctgcgctt ggaggtttgt ggatgatcgt cgcggggatg
      241 atctccttat ttcgatttat atatttcgcg agctcgtaga tctgaagttt ataacaatcg
      301 cccagtatac tcaaaccgcc ggccatgtct ccgtataaag ttccgtaacc cgttgccagt
      361 tcgcttttgt ttgatgtatt taataatata tagccgaatt tatttgcgat ggccatcaat
      421 aagtttccgc gggtgcggct ttgaatattt tcttcggcta tagaaaaagg aagatcttta
      481 aagacaggtt tcaagctgca caaaaaattc tcataaatag gatcgatgcg gatgatgtca
      541 tatggattat tcaaattctt acttaactga acggcgtcgt ttactgaccc ctcacttgaa
      601 tacggagatg gcatcaaaat cgccctcacg ttttcgctgc cgagcgcttc acacgccagc
      661 gataatacaa ctgcgctatc aattccgccc gaagaaccga ggatcgcttt gctgaatccc
      721 atcttacgga aataatcgcg aatgcccatg gtcagtgcgt tgtacacatg cgcaaggttc
      781 aagtcaggct gaaattcttt tacagctaat tctgtatttg ggatctgttc agccgttgca
      841 agcatcgggc cggatattgt tccgtcgtcg tttaattctg catattcgat cccttcttca
      901 aaatttggaa gtgccttaca caggtttgca tttttatcga aaacaagtga ccctccgtca
      961 aagacaattt cagtctggct gccaaccgcg ttgcaataaa acataggcag cttatacttt
     1021 acaacattca gcttaatcac cgctttacgg tcttcgtggt gcgtataatc aaatggcgaa
     1081 gcgctgatat tcagcattag gtccggatgc tgctgcatta aagcatccat ggggcagatg
     1141 cggtaaagag gattgtcgcc gagattccag atgtcttcac aaatggttat ggcgaggcgt
     1201 ttacctttaa aaggaacaat gttccattcg aatgacggtt caaaataccg gtattcatca
     1261 aacacatcat acgtcggcaa caatgtttta tggatctccg ctttgatctc tttttcatat
     1321 aaaaagaagg cggcgttaaa aagatctttt ccttcgatca ccgggttgcg cgcgggtgag
     1381 ccaacgagga ccgcaatagt atctgcatgt tcttttattt catcgatggc cgcgtaacat
     1441 ttgttgatga aatcgttgaa ctcgacaaag tcgcggggcg ggtagccgca aacgcatagc
     1501 tcggtgaaca tgaccaggtc agcgttatgc ttctttgcct cttctactgc ggcgatgatc
     1561 tttttcgtat tgttttcaaa atcgccgatg agataattct gttgcgccag tgcgatcttc
     1621 atgatgcaaa gttcgc
//
LOCUS       DASQJI010000281         8807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_798987,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000281 DASQJI010000000
VERSION     DASQJI010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8807
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798987"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VEV83_07770"
     CDS             complement(<1..217)
                     /locus_tag="VEV83_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglyceryl transferase"
                     /protein_id="HYK45049.1"
                     /translation="MHLRKKQEDDITSENRTWIIIGAVFGAFFGSRLIGGLENPVSML
                     HSRNIFWHFYSNKTVVGGFLGGLAGVEI"
     gene            complement(435..776)
                     /locus_tag="VEV83_07775"
     CDS             complement(435..776)
                     /locus_tag="VEV83_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor"
                     /protein_id="HYK45050.1"
                     /translation="MSKKHQADARGFVYSTDPNFSFEHDNEQQQTLKPLEQRLKIRLN
                     TKLRAGKAVTLIDGFMGTVEDLEKLTKELKNFCGTGGSAKDNEIIIQGDQRDKVLQWL
                     LKNGYKQSRTI"
     gene            complement(788..1648)
                     /gene="nadC"
                     /locus_tag="VEV83_07780"
     CDS             complement(788..1648)
                     /gene="nadC"
                     /locus_tag="VEV83_07780"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HYK45051.1"
                     /translation="MTMFDERLEHLITEALNEDTGDGDHTTLSCIPPQQEGKAILRIK
                     DDGIMAGVDIAHRIFSHVESAVSFRAFKKDGDEIHKGETGFEINGHIHTILLCERLVL
                     NCMQRMSGIATVTRTYVEQLAGYKTKLLDTRKTTPNFRLLEKEAVRIGGGFNHRFGLF
                     DMIMLKDNHIDYCGGIEKAIDKAWTYVQEKKPGLKIEIETRNVEEVRKVCAGGRGKVF
                     RIMLDNFTPEQISEALNFINDDFETEASGGINLENIRQYAATGVDYISVGGLIHQAQS
                     LDLSLKAVII"
     gene            complement(2019..3587)
                     /locus_tag="VEV83_07785"
     CDS             complement(2019..3587)
                     /locus_tag="VEV83_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HYK45052.1"
                     /translation="MIKLLKNSIYFSSVLLLFASCGKFGKGKSSWNKKDGSSDATGWH
                     YNDKNQGGYYVAKAKDIKTGPGLVFVQGGTFTMGATEEDIMGDWNNVPRRITVNSFFI
                     DKTEVANVHYREYIHWIENVFSDPQYDAVVQGAKPDTLVWRSQLAYNEPYVEYYFRHP
                     SYNYYPVVGVTWRQAHDFCIWRTDRVNEIALVNQGYQNKNLIKQEMNGGGQDNFNTKS
                     YLMGEYEGVPGKPKNNPLKDAQGRPRTQVQFEDGILFPDYRLPTEAEWEYAALGLVSE
                     NPAPRSSEKKRGEELIANKQIYSWKNDGYDNLRATKKGAMQGAMLANFKRGNGDYMGT
                     AGGLNDRAAIPSAVNSFFANGYGLYNMSGNVSEWVADVYRPTTGLDEDDINPYRGNIF
                     MQIDKSGGEGNLRDSLGRIKMVPENDSALSERRNYQRSYAINYLDGDSSSRVNYGYGI
                     TTLISDQSRVVKGGSWLDMPYWLSPGARRFMEEYESSSTIGFRCAMTHFGAPEGLSTK
                     IKTGNFFPRRRQKR"
     gene            3912..5060
                     /gene="porV"
                     /locus_tag="VEV83_07790"
     CDS             3912..5060
                     /gene="porV"
                     /locus_tag="VEV83_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IX secretion system outer membrane channel
                     protein PorV"
                     /protein_id="HYK45053.1"
                     /translation="MMQKKLMVLAGFFLVGFSLMKTATAQSSSPNIVTTAVPFLRISP
                     DARSGGMGDAGITLSPDANATFWDLGKVAFAESPDAIGVTYTPWLADIAQDVYMISLA
                     GYHKIDEDQGFAASIRYFNLGSIQFVDPLGNPLGTGRPKEFGIDIGYSRKISSSLGLG
                     VALRYINSDLASGAVINGVTYKAGSAVATDLSLYGDNRQDGAGLTYGVALSNLGSKIG
                     YTDNADSKDYIPANLGAGIGYTWVFQEENKFTLALDANKLLVPEAPDFLDYNGDTTKF
                     EQDLDDYHSQSVFSSWFKAFGNSSYSLSVGAEYTYNDQFSLRTGYYWETQQMGNRNYF
                     TAGVGLKYNMFGFNFSYLAPSGNGVTRNPLSNTLRFGVVFDLGAAAQQ"
     gene            5125..5613
                     /gene="ispF"
                     /locus_tag="VEV83_07795"
     CDS             5125..5613
                     /gene="ispF"
                     /locus_tag="VEV83_07795"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HYK45054.1"
                     /translation="MNIRVGSGVDFHQLVEGRKLWMGGVEIPHSKGALGHSDADVLLH
                     AICDAMLGAACLGDIGEHFPDNSSEYKNIDSKILLKKTSDLLAKENYRVINIDSTVCL
                     QAPKIKAHVGQMQSVIALILGINANDVSIKATTTEKLGFVGREEGVIAYATVLISRYT
                     EA"
     gene            5653..6096
                     /gene="dut"
                     /locus_tag="VEV83_07800"
     CDS             5653..6096
                     /gene="dut"
                     /locus_tag="VEV83_07800"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008629012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HYK45055.1"
                     /translation="MAETLNIKIINKSTNPLPAYETSGSAGLDIRANLEQPVKLTPMQ
                     RHLIPTGLFIELPEGYEAQVRPRSGLAIKHGITCLNSPGTIDSDYRGEVKVILINLSE
                     EEQTIHHGDRIAQMIIQAVSRASWITVETLNESKRGPGGFGHTGK"
     gene            6101..6919
                     /locus_tag="VEV83_07805"
     CDS             6101..6919
                     /locus_tag="VEV83_07805"
                     /inference="COORDINATES: protein motif:HMM:NF025490.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4292 domain-containing protein"
                     /protein_id="HYK45056.1"
                     /translation="MHKLVYSLGFLGLILSSCRTSKTAQQSVSAAPVITESPAAKMKP
                     VDSFATEKQQLSEILYKPADFSTFYGKAKADFNSPQASGNATVYIKIQKDSAILVSIT
                     GPLNIDVARVLVTNDSVKIINYLQNTAQISSIAHLQQITKLPFAFNDFQNIIIGKPTL
                     HPNTPLNYEFKTDSIKITAADALIKYFFSFTKNDFNLGQTRLESAYGSSQINANIFYN
                     DYHLVNAINFSAQRDIAVNGDSPMSLQLDFKEYNFNQPQTFLFRIPKKYSVRYD"
     gene            6966..8309
                     /locus_tag="VEV83_07810"
     CDS             6966..8309
                     /locus_tag="VEV83_07810"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HYK45057.1"
                     /translation="MAKKLLITFFCFSTFFFASAQQQTKEEIQQKQQQLQKEITELNR
                     TLNQIKSNKKQSLSQLALVQRKIAARNELINSINKDLHRLDNTIYLNQLEINRMKREL
                     DTLKQNYAKSLVFAYRNRSNYDYLNFIFSATTFNDAIKRVAYLKSYRQYRETQVSTIV
                     KTQDVLQQKVAVLTSNKTEKRTTLVEQSKQLNVLQQDKAEQNQVVAQLKGKEKELSKE
                     IKANQKNQQQLKSALQVIINREIAEARKKAEAVAKQKALEEQKKKEAAAANNTTANNP
                     ASSNANNAAPKTASNATVKSNRVYSPLESTAEGLTESLNFENNRGRLPWPVSSGVVTI
                     HFGSYQIPGTLLKGNSEGITISLPTGTAVKSVADGEVSAVFDIGGQQAVVVRHGKYFT
                     AYSNLSSIKVSKGSQVNAGSVLGAAGTGGDGDGEVVFMVSNSSGYLNPESWLRSR"
     gene            8440..>8807
                     /locus_tag="VEV83_07815"
     CDS             8440..>8807
                     /locus_tag="VEV83_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HYK45058.1"
                     /translation="MKIADIISVLEQLAPPLLQESYDNAGLITGHPNMDCIGILCTLD
                     ATEQVIEEAKQLHCNMVVAHHPILFRPLKKISGKTYVERTIISAIKDDVAIYAVHTNL
                     DNVIKGVNDKIADKLNLVNR"
BASE COUNT         2488 a         1992 c         1931 g         2396 t
ORIGIN      
        1 tgatctcaac gcctgctagt ccgccaagaa aacctccaac tactgtctta ttcgaataaa
       61 aatgccaaaa aatatttctt gagtgcaaca ttgaaacggg attttcaagt ccgcctatga
      121 gcctactgcc aaagaaagct ccaaacaccg ccccgatgat tatccatgtt cgattttccg
      181 aagtgatgtc gtcctcttgt ttttttcgta ggtgcatata gtaccggaag ccgatgaaga
      241 gggccgaaat ttccgtgatg gtgtgcagca agatcgatac gtgcccaaag tgaattgcta
      301 cggggaactg cagtttggat tttttaaaag gtaaacgaaa aaattttgga aatttctgga
      361 tattatcctg ttacggtaat gtactataaa aagcagtagg cggcgtcgtt gtcatttctc
      421 aagtcgcgct gcggtcagat cgttctgctt tgcttatatc cattcttcaa caaccattgc
      481 aaaaccttat cacgctgatc gccctggatg atgatctcat tatctttcgc gctgccaccc
      541 gtgccacaaa aatttttcag ctccttagta agtttttcca ggtcttcaac ggttcccatg
      601 aatccgtcaa tcagcgtgac ggcttttcct gcgcgaagct tggtgtttaa cctgatcttc
      661 aatctttgct ccaatggctt caacgtttgc tgctgttcat tatcatgttc aaatgaaaaa
      721 ttcggatcag tgctgtacac aaaacccctg gcatcagctt gatgtttttt gctcataaaa
      781 tcccgattta aattataacg gctttcaaac taagatcaag gctctgcgcc tggtgaatta
      841 gacctccaac gctaatgtag tccacgccgg ttgccgcata ctgccggata ttttcaaggt
      901 ttataccgcc gctggcttct gtctcaaaat cgtcgtttat gaaattcaaa gcttcggaga
      961 tttgttcggg tgtgaaattg tcgagcatga tccggaatac ttttccacgc cccccagcac
     1021 aaacctttcg cacctcttcc acgtttctcg tttcaatttc tattttcaaa ccgggtttct
     1081 tctcttgcac gtatgtccat gccttatcga ttgctttttc aatcccgccg caataatcaa
     1141 tatggttgtc ttttagcatg atcatgtcga acagcccaaa cctgtgatta aatcctccgc
     1201 cgatcctgac agcttctttt tcaagcagcc tgaaatttgg agtggttttt cttgtatcca
     1261 gcaacttcgt tttgtacccg gcaagttgtt caacatatgt gcgcgttacc gttgcaatgc
     1321 cactcatgcg ttgcatgcag ttcagtacga gcctttcgca tagcaatatg gtatggatat
     1381 ggccattgat ctcaaatccg gtttcaccct tgtgaatttc atccccatct tttttgaaag
     1441 ctctaaagga aaccgccgat tcaacgtgtg agaaaattct gtgcgcaatg tcgacaccgg
     1501 ccattattcc gtcgtctttt attctaagaa ttgcctttcc ttcctgttga ggtggaatgc
     1561 agcttaaagt agtatgatca ccatcacccg tgtcttcgtt gagagcttcc gtgattaaat
     1621 gttccagccg ttcatcgaac atggtcatag ctgcaaaact aatacatgat gtagtatgct
     1681 gctgcctgtg tacgtaagtc caatcatcga aatattacga gatgaaatga aaaaacctct
     1741 agttttatcc gccgaaatta aatatgtcac aacgaaaaca tcgcgatccc ctcaccgaat
     1801 atcgtaaccg tacgatgaga gagcagggta tccggcgtca gaaacaatct tcttctcagc
     1861 caaaaagcaa tgagcgcttc gctaaggcta ttgtaatagt gttcgtgatc atcattttga
     1921 tagttattta tgttatcagt tttatgagcc cataagcccg aaaaataaaa aagccacccg
     1981 cagaaatgcg aatggccttt tccttattta cctttccttt atctcttttg tcttcttctc
     2041 gggaaaaagt ttccggtttt gatctttgtt gacaaacctt cgggtgcgcc aaagtgtgtc
     2101 atcgcgcaac ggaaaccgat ggtggagctg ctttcatatt cttccataaa gcggcgcgcg
     2161 ccaggactca accagtaagg catgtccagc cagcttcctc cctttaccac tctagattga
     2221 tcacttatca gtgtggtgat gccataacca taattgacgc ggcttgaaga atcaccgtct
     2281 aaataattga tagcataaga acgttggtag ttacggcgtt cggagagcgc agagtcgttt
     2341 tcaggtacca tcttgattct tccgaggctg tctctcagat ttccttcgcc ccccgattta
     2401 tcgatctgca tgaatatgtt cccgcgatat ggattaatat catcttcatc caaacccgtg
     2461 gtcggacgat acacatcggc aacccattca cttacattac cactcatgtt atacaggccg
     2521 tatccgttcg cgaagaaaga attcacagcg gaaggaatag ctgcacggtc attcaatcca
     2581 ccggccgtac ccatgtagtc gccattgcca cgtttgaaat tggcaagcat agcgccttgc
     2641 atagcgcctt tctttgtagc acgaagattg tcatatccgt cattcttcca tgaataaatt
     2701 tgtttgttgg cgataagttc ttcacctctt ttcttttccg aactgcgggg agccgggttt
     2761 tcgcttacca gtccgagcgc tgcatattcc cattcggctt ctgtcggcag gcggtagtcg
     2821 gggaataaaa tgccgtcttc aaactgcact tgtgttcttg ggcgcccttg tgcatctttc
     2881 aaaggattgt tcttgggctt cccgggaaca ccctcatatt cgcccatcag gtaagacttt
     2941 gtgttgaaat tgtcctgccc gcctccattc atttcctgtt tgatcaggtt cttgttttga
     3001 taaccctggt ttaccagtgc tatttcattt acgcggtcgg tacgccaaat gcagaagtcg
     3061 tgtgcttgcc tccaggttac tcctacaaca ggataatagt tgtaagaggg gtggcggaaa
     3121 taatactcaa cataaggctc attgtatgct aactggctgc gccaaacaag cgtgtcaggc
     3181 tttgcaccct gcacaaccgc gtcgtattga gggtcagaaa aaacgttttc gatccaatga
     3241 atatactcgc ggtagtgaac gttagcaact tcggttttat caataaagaa agagttcaca
     3301 gttattctgc ggggaacgtt gttccagtcg cccataatgt cttcttcggt cgcacccatc
     3361 gtaaacgtac cgccctgcac aaacacgagg cccggcccgg tcttaatgtc tttggccttg
     3421 gcaacatagt acccgccttg attcttgtcg ttgtagtgcc acccggtcgc gtcgcttgag
     3481 ccatcttttt tattccatga actctttccc tttccgaatt tgccgcacga agcaaaaagg
     3541 agtaaaacgg aactgaaata aattgaattc ttaagcagct ttatcattga gaaaagatta
     3601 ttatttcaat taaaaagaac ggtacccggt atttattatt gtgtagacag ttaagtttta
     3661 atctccaaca aaaataagaa gttatggctt tgggtgctca tcttcgataa ctatttgtcc
     3721 ttatataaaa attatcattg caaaaagtat tgttggaaaa gaaattaaaa aactacatat
     3781 ttgccatact aaccactaat ttttaatcgt cttaataact tctatcgaaa aaattttacc
     3841 cttttggctg aaagcaactg tgataaacag cgtacgacct tttcagcata ccaaaatgat
     3901 aaaacaatag aatgatgcaa aaaaaattga tggttttagc cggctttttt ttagttggtt
     3961 ttagcctgat gaaaactgcc acagcccaat caagttcacc caacattgtt accacagccg
     4021 tccccttttt aagaatttcc cctgatgcga gatctggtgg tatgggcgat gcaggcatca
     4081 cgctaagccc tgacgctaac gccacatttt gggacttggg taaggttgca tttgctgaaa
     4141 gccctgacgc catcggagtt acatacactc cctggttagc cgatattgca caagacgttt
     4201 acatgatcag ccttgctggt tatcataaga tcgatgaaga ccagggattt gcggccagca
     4261 tccgctattt caatcttgga tcaatacagt ttgttgatcc gctcggaaat ccactgggaa
     4321 ccggtcgccc gaaagagttt ggcatcgaca tcggatattc aagaaagata tcttcctcac
     4381 ttggcctcgg cgtagcgctg cgttacataa actctgacct ggcaagtggg gcagtaataa
     4441 atggagtaac ttataaagcg gggagcgctg ttgccaccga cctgtcgctt tacggagata
     4501 acaggcaaga cggagccggc ttaacgtatg gtgttgcgct gagcaatctt gggtcaaaaa
     4561 ttggctacac ggataatgcc gactctaagg actatatacc tgcgaactta ggcgccggta
     4621 tcgggtacac gtgggtgttt caggaagaaa ataaattcac gctggcgctg gacgctaata
     4681 agttactggt accggaagct ccggactttt tagattataa tggtgatact accaagtttg
     4741 agcaggacct ggacgattat cattcacaga gcgtgttcag cagctggttc aaagcatttg
     4801 gcaacagttc ctattccctg tcggttggcg ctgaatacac ctacaacgac cagttctcat
     4861 tgaggaccgg gtattattgg gaaacgcagc aaatgggcaa ccggaattat ttcacagcag
     4921 gcgtcgggct caaatacaat atgtttgggt ttaacttttc ttacctcgca ccttccggga
     4981 acggcgttac acgaaatccg ttatcgaaca ctttacggtt cggggtggtg tttgacctgg
     5041 gggcggcggc gcagcaataa taattttttc aactttccat attacggcga aggaaatacc
     5101 ttcgctttct ttttatatta aatcatgaac atcagggttg gatctggcgt tgattttcac
     5161 caattagttg agggaagaaa gttatggatg ggaggcgtag agattcctca ttcgaaggga
     5221 gcgttgggcc atagcgatgc ggacgtttta ttgcacgcga tctgcgacgc catgcttggt
     5281 gccgcctgcc tcggcgatat aggcgaacac tttcctgaca attcatcgga atataaaaac
     5341 atcgacagca aaatattgct gaaaaagacg agcgacctgt tggcaaaaga gaattaccgg
     5401 gtgatcaata tcgatagtac tgtgtgttta caggctccga agataaaagc gcatgttggg
     5461 caaatgcaaa gcgtgatagc tcttatcctc ggtataaacg ctaacgatgt gtctataaaa
     5521 gcgacaacca cagaaaagct gggattcgtc gggagggaag agggtgtgat cgcatatgca
     5581 acggtgctaa tttctcgata cactgaggcc tgacaggtgt ctttcggcca aaacttttta
     5641 tggctaaaaa ttatggcgga gacattgaac attaagataa ttaataagtc tacgaatccc
     5701 ttgccggcat atgaaacaag tggctcagcg ggtctcgata tcagggcaaa ccttgaacag
     5761 cctgttaaat tgacgccgat gcaacgccac ctcattccca ctggcttatt tattgaattg
     5821 ccggagggat acgaggcgca ggtgcgtcca cgcagcggtc tggctatcaa acacggtatc
     5881 acctgcttaa attcgccggg cacaattgat agtgattatc ggggtgaggt gaaagtgatc
     5941 ctgatcaatc tctcggagga agaacaaacg atccatcacg gcgacaggat cgcgcaaatg
     6001 ataatacagg cagtaagtcg cgccagttgg ataacggttg aaactttgaa tgaatctaaa
     6061 cgcggaccgg gtggtttcgg tcatacagga aaatagacaa atgcacaagt tagtttacag
     6121 tttgggattt ctcggattga tattgagtag ttgccgcacg tcgaaaaccg ctcagcagtc
     6181 ggtttctgcg gcgccggtta tcaccgaatc gcctgcggcg aagatgaaac cggtcgattc
     6241 tttcgcgacg gaaaagcaac agctttcgga gattctttac aagccggcag acttcagtac
     6301 attttatggc aaggcgaagg cggattttaa ttctccccag gcatcgggca acgctacagt
     6361 gtatatcaaa atacaaaaag acagtgccat attggtttcg atcacgggtc ctttaaatat
     6421 cgacgtagca agggtacttg taacgaatga cagcgttaag atcatcaact accttcaaaa
     6481 tacagcgcag atcagcagca ttgcgcacct ccagcaaata acaaagctgc cttttgcgtt
     6541 caacgatttt caaaatataa ttatcggtaa gccgacattg catccaaaca cgcctttgaa
     6601 ttatgaattc aaaacagatt caataaagat cactgctgct gacgccctga taaaatattt
     6661 tttctccttc acgaaaaatg atttcaacct tggacaaacg cgtttagaaa gtgcgtacgg
     6721 gagctcacag atcaacgcta acattttcta caacgattac catttggtga acgcgatcaa
     6781 cttttccgcg cagcgcgata ttgcagtgaa tggggactcg cctatgagcc tgcagctcga
     6841 ttttaaggaa tacaatttta atcagccgca aacgtttctg tttagaattc ccaaaaaata
     6901 ttcagtgagg tacgattaag cggtcgtaaa cgttaattta gcagcacttc aagaaacaga
     6961 acgccatggc aaaaaaactg ctgattactt ttttttgttt tagcactttt ttcttcgctt
     7021 ccgcgcaaca gcaaacaaaa gaagaaatac aacaaaaaca gcagcagctc cagaaagaaa
     7081 taacggaact taacaggacc ctgaaccaga taaagtcaaa caagaagcaa tcgctgagcc
     7141 agctagcgct tgtgcaacgc aagatagcag cacgaaatga gcttatcaat agcatcaaca
     7201 aagatctgca caggttggac aatactattt atctcaatca gcttgagata aatcgcatga
     7261 agcgtgaact cgatacgttg aagcagaact acgcgaaaag ccttgtattc gcataccgaa
     7321 accgcagtaa ttacgattat ctgaatttta tcttttcggc caccacgttt aacgacgcca
     7381 ttaaacgcgt tgcttatttg aaaagttacc ggcaataccg cgaaacgcag gtaagcacta
     7441 ttgtaaaaac gcaggatgtt ttacagcaaa aagtagcggt attaacttcc aataagacag
     7501 aaaagagaac cacccttgtt gaacagagca agcagttgaa tgttttgcag caggacaagg
     7561 cggaacaaaa ccaggttgtg gcacagctga aagggaaaga aaaagagctt agtaaagaaa
     7621 tcaaggcgaa tcaaaaaaat cagcagcaac taaaaagcgc tttacaagtg ataatcaatc
     7681 gtgagatcgc cgaagcgaga aagaaggctg aagctgttgc aaaacaaaag gcgttggagg
     7741 aacagaagaa gaaagaggca gcggctgcaa ataataccac tgcaaacaac ccggcttcat
     7801 cgaacgcgaa caatgcagcg ccaaagaccg ccagtaacgc gaccgtaaaa agcaatcgcg
     7861 tctatagccc tttagaatca acagcagagg gtttaactga atcgctaaat ttcgaaaaca
     7921 atcgtggcag attaccttgg ccggtaagtt caggagttgt tacgatacat tttggttctt
     7981 accaaatacc cggaaccctg ttaaaaggca acagcgaagg aattactatt tctttaccga
     8041 ccggcacggc agtcaaatcg gtcgccgacg gagaagtatc tgccgtattt gacattggcg
     8101 gccagcaagc agtcgttgtt cgtcacggaa agtattttac tgcttatagt aatttaagtt
     8161 caataaaagt aagcaagggc tcgcaggtta atgcagggtc tgtacttggc gccgccggca
     8221 cagggggaga cggtgatggc gaagttgtgt tcatggtcag taacagcagt ggatatctca
     8281 atcctgaaag ctggcttcgc tccaggtaat tcgaaaaaga tgcgggttct cgtccgcgta
     8341 tttcaattca tatacattct tcctctttct ttttcgaaac atttttgaaa ataagactgc
     8401 tgaaaaattt tcactacggc gatttcataa tttgcatgta tgaaaatcgc agatatcatt
     8461 tctgttcttg agcaattggc tcctccgtta ctacaggaaa gttatgacaa cgccggcttg
     8521 ataaccggtc acccgaatat ggattgtatc ggcatattgt gcacgctgga cgctacggag
     8581 caagtgatcg aagaagcaaa gcaacttcat tgtaacatgg tggttgccca tcacccgata
     8641 ttgttccgcc ctttaaaaaa gatcagcggt aaaacctacg tcgaaagaac gatcatttct
     8701 gctattaaag acgacgttgc tatatacgcc gttcatacaa acctggataa cgttattaaa
     8761 ggagtgaatg ataagatcgc cgacaagctc aaccttgtga acaggag
//
LOCUS       DASQJI010000282         3529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_338321,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000282 DASQJI010000000
VERSION     DASQJI010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338321"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..963
                     /locus_tag="VEV83_07820"
     CDS             <1..963
                     /locus_tag="VEV83_07820"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HYK45059.1"
                     /translation="QVFSVWCDETRQQPYQFANREIDTLYAWIARNPTKMMLVTNSDE
                     LSRAVKDHKLASMIGVEGGHMIEDDLSKLDSLYKRGVRYMTLTWNNNTSWATSAKSET
                     DTAQHLQHKGLTDFGKQVVQHMNAIGMMVDLSHVGEQTFWDAIKTTTKPVLVSHSCVY
                     TLCPAFRNLKDEQIKAIAKNGGVIQLNFYSGFLDSTFAAKEKAFNQRHKAEKDSLMAA
                     GKQEFFADNYLFLKYANEVADMRAPFHLLLDHLDYIVKLAGVDHVGMGSDFDGISFPP
                     QQLDDVTAYPLITKALLERGYSKADITKILGGNFIRVLKANEVK"
     gene            complement(986..1639)
                     /locus_tag="VEV83_07825"
     CDS             complement(986..1639)
                     /locus_tag="VEV83_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HYK45060.1"
                     /translation="MKVLSFSFLLLVLHPVIAQKPPFYDDIQGFKKQDSIKPPQKHAI
                     LFLGSSSFTKWTDVQSYFPGYPIINRGFGGSTLTDVIRYANDIIFPYDPKEIVIYCGE
                     NDIAYSDTVSAETVFNRFLALYNMIRVKYKSIPVVYISIKPSPSRRKYWTKMIEANTL
                     IKNYLDKQRHTTFINVFDLMLDQYNQPKPEIYLNDSLHMNAKGYAIWQKAIEPHLVK"
     gene            1778..2875
                     /locus_tag="VEV83_07830"
     CDS             1778..2875
                     /locus_tag="VEV83_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45061.1"
                     /translation="MNRAFILSLLLLTQHCCSAQVDNANKKDSIKVLDAKYRVYDLND
                     TKARASVQLPYDSIEFRDVRYDTTFVMMTFPLLHVSRTYDVKVNLESGLAQNLTKYFN
                     KYYSTVNNNSHKTLVCYIKKFSVTLQYELLEHFFNSGDLEEDTANRVTIEIECYYKKD
                     DLLFPAIRLDTSYLHHFPDIILNAAKQIRGLFQPLMNKMEHVNLENVEKRKGYTEPEI
                     IKRYADRFNIPILQTAVYKKGVYKTFTEFKNNAPSIDSFKVSTDKMKVNESNRGLFDP
                     GSLVWKAFQTRNTAVFLYDKNNTLISPSEIFGYCDGKTIWIEHGAFFYPLEKTGNAFE
                     FMYVYHYTDNNLRTNTVFILTPLNMENGHSN"
     gene            complement(3310..>3529)
                     /locus_tag="VEV83_07835"
     CDS             complement(3310..>3529)
                     /locus_tag="VEV83_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HYK45062.1"
                     /translation="NDLGDKLWGPYGFFDAFSETDNWYRPWYLAIDQGPEVVMIENYR
                     SGLLWKLFMSCAEVQEGLNKLGFQSSSR"
BASE COUNT         1071 a          727 c          751 g          980 t
ORIGIN      
        1 caggtttttt ctgtttggtg cgacgaaacg cggcagcaac catatcaatt tgcaaatcgc
       61 gaaatagaca cattatatgc ctggatcgct cgtaatccaa ccaaaatgat gctggttacc
      121 aacagcgacg aattatcgcg ggccgtcaaa gatcacaagc ttgcttccat gatcggtgtt
      181 gaaggtggcc acatgatcga agatgatctg tcgaagctcg acagcctgta taaacgcggc
      241 gttcgttaca tgacgctcac ctggaataat aatacttcat gggctacttc ggcaaaatct
      301 gaaacggata ccgctcagca tttgcagcat aaggggctta cagattttgg aaaacaagtg
      361 gtgcaacaca tgaatgcgat cggtatgatg gtcgacctga gtcatgtggg tgaacaaact
      421 ttttgggacg cgatcaaaac cacaacaaag ccggtcctgg tttctcatag ttgcgtgtac
      481 acactttgtc cggcgtttag aaatttgaaa gacgagcaga taaaagcaat tgcaaagaat
      541 ggcggtgtta tccagttgaa tttttactcg ggatttctgg acagcacgtt tgctgcgaaa
      601 gaaaaagctt ttaaccagcg gcataaagcg gagaaggatt cattgatggc agccggtaaa
      661 caggaattct tcgccgacaa ttacctgttt ttaaaatatg caaatgaagt tgccgacatg
      721 cgtgcaccat ttcatttgct gttagatcat cttgattata tagtgaagct ggcaggcgtt
      781 gatcacgtgg gcatgggcag cgattttgac gggatcagtt ttccaccaca gcagttagat
      841 gacgttaccg catatccgct catcacaaaa gcattactgg aaaggggcta ttcaaaagcc
      901 gatatcacga aaattctcgg cggtaatttt ataagagtgc tgaaagcaaa tgaagtgaag
      961 taactcatca ctcattatcc gtgactcatt ttaccaggtg cggttctatt gctttttgcc
     1021 atatggcata tccttttgca ttcatgtgca agctgtcgtt taaatatatc tcgggctttg
     1081 gctggttgta ttggtccagc atcaggtcaa acacatttat gaacgtggtg tgccgttgtt
     1141 tgtccaggta atttttgatc agcgtatttg cttcgatcat ttttgtccag tacttgcggc
     1201 ggctcgggct tggcttgatc gatatataaa cgaccgggat acttttatac tttacgcgga
     1261 tcatgttata cagagccagg aaccggttaa aaactgtttc agcggaaact gtgtcgctgt
     1321 atgcgatgtc attctcgcca caataaataa ctatttcttt cggatcgtac ggaaagataa
     1381 tgtcgttggc atacctgatc acatcggtta atgttgatcc accgaacccg cggttgatga
     1441 taggatatcc cggaaaataa gattgcacat ccgtccattt cgtgaaagag gaactgccta
     1501 aaaagagaat agcgtgtttt tgtggcggct ttatgctgtc ttgctttttg aaaccttgta
     1561 tgtcatcgta gaacgggggt ttctgtgcga tcaccgggtg aagaaccagc aacaggaaag
     1621 agaaggatag aactttcata cacgctgact ttgagttaag tgttttattt tctatattta
     1681 tttgggaagt taaaaagatt gcagggtaat gaaacaacgg gcatgctatt ttttacatcg
     1741 accctgaatg acgatcgtct aaccattcgt actacatatg aatcgcgcgt tcattttatc
     1801 acttctcttg ctgacacaac attgttgtag tgcgcaggtc gataacgcta ataagaaaga
     1861 cagcattaaa gtgctggatg cgaaatacag agtctatgat cttaatgaca ctaaggcgcg
     1921 cgcatctgtg caattgccat acgattcaat tgagttcagg gatgtgcgct atgacaccac
     1981 tttcgttatg atgacgttcc ctcttttaca tgtttcgcga acgtatgatg ttaaagtaaa
     2041 cctcgaaagc ggcctcgcgc aaaacctaac aaaatatttc aacaagtact attccaccgt
     2101 aaacaataac agccacaaga cgctcgtatg ttacataaaa aaattctcgg tgaccttgca
     2161 atatgaattg cttgaacatt ttttcaattc aggtgattta gaagaggaca cagctaaccg
     2221 ggttactatt gaaatagaat gttactataa gaaggacgac cttctttttc cggccataag
     2281 attggatacc tcgtacctgc accactttcc cgacattatc ttaaatgccg caaagcaaat
     2341 aagagggctg ttccagcctt tgatgaacaa gatggagcat gtgaacctcg aaaatgtgga
     2401 gaaacgcaaa ggctatacgg aaccggagat catcaaacga tatgccgacc gattcaatat
     2461 tccgatttta caaactgctg tatataagaa aggcgtgtat aaaacgttca ctgaatttaa
     2521 aaacaatgcg ccgtcgatcg attcgtttaa agtttcaact gataagatga aagtaaatga
     2581 aagcaacagg ggattgttcg acccggggtc gttggtctgg aaagcttttc aaacaagaaa
     2641 tacggcggtt ttcctttacg ataaaaacaa caccctgata agtccttcag agatctttgg
     2701 atattgtgat ggaaaaacga tctggataga acacggtgca ttcttttacc cgcttgaaaa
     2761 aaccggcaac gcttttgagt tcatgtatgt ttatcattat acggataaca acttacgcac
     2821 aaacaccgtt tttatattga cccccctaaa catggaaaac gggcatagca actgatgcgc
     2881 gaattcataa gttaacggaa ccttgtaagc gcaatctgaa tagctggtag tctaccgaga
     2941 aaattagcgc aaacatttaa tggcagatgg tagtgatcgc aaaaaacttt caaaaccatt
     3001 tttttaaacg ttgttgccga acggattttc tcacaggtca acacagaaaa tcacagaaaa
     3061 atactagaca aaaattcatc tgagcacatc cgtgtaaatc tgtgagaaat ttaattacag
     3121 agttaatggc agaccgaatt catcaaaaag aactttcaac caccgatttt tctatacgtt
     3181 gtcgcacgaa cagatttttc tcacacatca acacagaaaa tcacagaaaa atattagaca
     3241 aaaatttatc tgagcacatc tgtgtaaatc tgtgagatat ttaatttcac ggttaatggc
     3301 agaccatatt catcgcgaag agctttgaaa tcccaattta tttaagccct cttgcacttc
     3361 agcgcaactc atgaacaatt tccatagcaa cccgctgcga taattttcga tcatcacaac
     3421 ttccggaccc tggtctatgg caagatacca tggcctgtac cagttatctg tttcactaaa
     3481 ggcgtcgaaa aagccgtacg gcccccaaag tttgtcgccg agatcatta
//
LOCUS       DASQJI010000283         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2795664,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000283 DASQJI010000000
VERSION     DASQJI010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795664"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1726
                     /locus_tag="VEV83_07840"
     CDS             <1..1726
                     /locus_tag="VEV83_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
                     /protein_id="HYK45063.1"
                     /translation="VGMQTQEVHLTDASHYDVVLTRTVGTITDCVVTTALGVQRKSKS
                     HGYTLQGAVPGVSVSRDNLAYAPISSGQNERGTIDAWRYNDSFNTEGYDHIVENPFLK
                     VEGNPLSTFSIDVDAASYANVRRFLNDGDLPPAGAVRIEELINYFSYQYPQPQNDEPF
                     SINTEISSCPWNAKHKLVLIGLQGRNISTENLPASNLVFLIDVSGSMDQEDKLPLVKS
                     SLKLLVDQIRPQDKVALVVYAGNAGLVLPSTSGAEKMKIKDAIDALDAGGSTAGGEGI
                     KLAYKTAQENFVKGGNNRVILCTDGDFNVGVSSEDELQHLIEDKRQSGVFLSVLGFGT
                     GNYQDSKMQLLADKGNGNHNYIDNLSEAKKVFVSEFGGTLFTIAKDVKLQIEFNPAKV
                     QGYRLIGYENRMLNKEDFNDDKKDAGELGSGHTVTALYELIPVGVKDTMLKDVDALRY
                     QKQPKARIENNLNDELLNIKLRYKKPDGDKSALIEHPLNDDNVPFAGTSNNFRFAASV
                     AEFGMLLRNSEFKADADFHSVKNIAQSAIGDDAEGYRQEFIRLVKKASALKEKETAQV
                     DTNNDDDQ"
     gene            complement(1997..>2369)
                     /locus_tag="VEV83_07845"
     CDS             complement(1997..>2369)
                     /locus_tag="VEV83_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK45064.1"
                     /translation="VTVLHAKPLASASLLKEQQRIQQVYHFIETNYHEQIDVNEVARL
                     CHLTTAAFCRYFKKSTHYTFTDFLNHFRINQSKKILMQNKSVTEACYESGFENISYFN
                     KTFKKFAGENPSVFRKNNLIK"
BASE COUNT          691 a          497 c          558 g          623 t
ORIGIN      
        1 cgttggcatg caaacacaag aagttcacct aacagatgca tcgcattatg atgtggtact
       61 cacaagaact gtaggtacca ttactgactg cgttgttaca acagctttag gcgtacagcg
      121 aaagtcaaag agtcatggct acacacttca gggcgcggta ccaggcgtat cagtaagcag
      181 agacaatctt gcgtacgcac cgatttcgtc cgggcaaaat gaaagaggta cgattgatgc
      241 gtggcgttat aacgatagct tcaacaccga aggctatgat cacattgttg agaatccgtt
      301 cctcaaagtg gaaggtaatc cgctctcaac tttttcgatc gatgttgatg cagcttcgta
      361 tgcgaatgtg cgccggtttc tgaatgatgg cgatttacct cccgctggcg ccgtacgcat
      421 cgaagagctg atcaattact tttcgtatca atatccgcag ccgcaaaacg acgaaccgtt
      481 tagcatcaac acggaaattt caagttgtcc gtggaatgca aaacataagc tggttttaat
      541 tggcttacag ggaagaaata tctcaacaga aaacttaccg gcatcgaacc ttgttttcct
      601 gatcgatgtt agtggcagta tggaccagga agacaaactt ccgctggtta agtcatcgct
      661 gaaattatta gtcgatcaaa tccgtccgca ggataaagtt gcactggttg tatatgcggg
      721 caacgcaggc ctggttttgc catcaacgag cggcgccgaa aagatgaaga tcaaagacgc
      781 tattgatgca cttgatgccg gcggatcgac tgcgggcggt gaaggaatca agctggcgta
      841 taaaacagcc caggaaaatt ttgtgaaagg aggcaacaac cgggtgatcc tttgcactga
      901 cggcgacttt aacgtcggcg taagcagtga agacgaatta caacatttga ttgaagataa
      961 acgacaatcc ggcgtgtttc tttcggtgct tggttttgga acaggcaatt accaggattc
     1021 gaaaatgcaa ttgctcgccg ataaaggcaa tggcaatcac aactacatcg ataatctttc
     1081 agaggcaaaa aaagtttttg tgagcgaatt cggcggaaca cttttcacga tcgcgaaaga
     1141 tgtaaagctg cagatcgagt tcaatcctgc aaaggtgcag ggttatcgtt tgatcgggta
     1201 cgaaaatcga atgcttaaca aagaagattt taatgatgat aagaaggatg ccggtgaact
     1261 cggaagcggg cataccgtca cagctttgta tgaattgatt ccggtgggag taaaagatac
     1321 gatgctaaaa gatgtggatg ccctgcgtta ccagaaacaa ccaaaagcgc gtatcgaaaa
     1381 taacttaaac gatgagctgc tgaatattaa actgcggtat aagaaacctg acggcgataa
     1441 gagcgcactc atcgaacacc cgttgaatga tgacaatgtt ccttttgctg gcacttcgaa
     1501 caattttcgt tttgcagcct cagtcgctga gttcggaatg ctgttgcgaa actcagaatt
     1561 taaggccgat gcagactttc attcggtgaa gaatatcgca cagtctgcca ttggcgacga
     1621 tgctgaaggt tatcggcagg aattcatacg actggttaag aaagcgtctg cgttaaaaga
     1681 aaaagaaaca gcacaggttg acacaaacaa cgacgacgac caataggtaa atttcaaccc
     1741 ttgccctaaa aacgattggt aattgaggca tagcaatgta aaaggcaggc ttgaggagcc
     1801 tgtcttttcg cgttagcgct ttcatttgta tttgctgctt aagtcacctg gcatgctcca
     1861 tcgtgcgcgt gtcgatcagg tttccattta catacagcga ataaccgtca ggcgcgttcg
     1921 gcaataatga tgcatcaaat tacagcgaac cctttccgct gcctgatgca ttcatttctt
     1981 taaaattttc gctgcgttat ttgatcaaat tattcttcct gaataccgat ggattttctc
     2041 ccgcgaactt tttgaatgtt ttattaaaat aggaaatgtt ctcaaagcca ctttcatagc
     2101 aagcttcggt cacactcttg ttttgcataa gaattttttt cgactggtta atgcgaaagt
     2161 gattcaaaaa atcagtgaac gtgtaatgcg ttgatttttt gaagtatcta caaaacgcgg
     2221 ccgttgtaag atggcacaac ctggccactt cgttcacgtc aatctgctcg tggtaatttg
     2281 tctcaataaa atgatatacc tgctgaatac gctgttgctc ttttagcaaa gacgcgcttg
     2341 caagtggttt ggcatgcaac acagttacc
//
LOCUS       DASQJI010000284         3019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2028359,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000284 DASQJI010000000
VERSION     DASQJI010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2028359"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VEV83_07850"
     CDS             <1..769
                     /locus_tag="VEV83_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45065.1"
                     /translation="KNTDNAHDRSPAVTTRLISITGDSADFLFAYENDTITDVLARHD
                     DGQQSIDTTYSPYAHIRYESNNYIKATSPADSFYYTEYFLNADHLPSQIIMHFDKWGN
                     KDVVDFFYNPSTNLLDSVHDTNDGVHFTRAYMEYDGYDITRIKTTFPYFTGLIENNSE
                     YDYDKTTPNVFKTTGSLFYIYQIPFGTYNFINSWVVYHQELIVKMFSHSTFNNMRYSN
                     AGYDWQDTMHYTLNTEGKLETVSYENEPNYILRYNYK"
     gene            complement(1094..1396)
                     /locus_tag="VEV83_07855"
     CDS             complement(1094..1396)
                     /locus_tag="VEV83_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45066.1"
                     /translation="MRAVKVEYTVKPEYVATNKANIQKVMEELRGLGDTGTLYSTYIK
                     EDGCSFVHFSIHKNEENVITSLAAFKAFSAQLKAEGLVGEAPQALKLEMVARSFDF"
     gene            complement(1414..1836)
                     /locus_tag="VEV83_07860"
     CDS             complement(1414..1836)
                     /locus_tag="VEV83_07860"
                     /inference="COORDINATES: protein motif:HMM:NF040124.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6526 family protein"
                     /protein_id="HYK45067.1"
                     /translation="MKEQNFKKHAQYVPGFHFLALTLIGASLIIAIILLVSGGFSLSN
                     VFDLLVALSLGLLFFYLRQFATANQDRIIRSEENFRSFRLTGKVLDSRLTKGQIIALR
                     FAGDEEYSSLTEKATKEDLGPGDIKKAVQQWRADHHRV"
     gene            complement(2036..2548)
                     /locus_tag="VEV83_07865"
     CDS             complement(2036..2548)
                     /locus_tag="VEV83_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45068.1"
                     /translation="MKGISKCKIYWFPLLFTCLMACSKDSGSVTSGYYVKFKLDNEQK
                     QYNEITAVFFSNNGYVYHFGGEAQKDPANDSDELIAVIVNDLQPITINKVYGDSLMDA
                     MQQGLINYSDETGSHYTSMITDGDNVKIVFTEISDTTVSGTFSGKIYNVHEPLDIHSI
                     TEGQFHLARQ"
     gene            2775..>3019
                     /locus_tag="VEV83_07870"
     CDS             2775..>3019
                     /locus_tag="VEV83_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45069.1"
                     /translation="MRTLLCSMFALSAILQHFAGYAQQTTTDKIEGVWKGTSLCQVKP
                     SACHDESVVYHISKKSANLYTIQANKIVNDAEVDMGT"
BASE COUNT          913 a          626 c          565 g          915 t
ORIGIN      
        1 caaaaatacc gataacgctc acgatagatc acctgctgta acaacaagac tcatttcgat
       61 taccggtgat agtgcggact ttctatttgc ttatgaaaac gacacgataa ctgatgtgct
      121 tgccaggcac gatgatggac aacaatcgat agatacgact tactcacctt atgcacatat
      181 aagatacgag agtaacaatt atattaaagc aaccagcccg gctgactctt tttattatac
      241 agagtatttt ttaaatgccg accatttgcc ctcgcagatt attatgcatt ttgataaatg
      301 gggaaataag gatgttgttg atttttttta taatcccagc actaatttgt tggattctgt
      361 ccatgataca aacgatggcg tacattttac ccgtgcatac atggaatatg atgggtatga
      421 cataacacgc ataaagacca ctttcccata ttttaccggt ttaattgaaa ataatagtga
      481 gtatgattac gataaaacca ctcccaacgt ttttaaaaca acaggttcgc ttttttatat
      541 ttatcaaatt ccttttggta cttataattt tatcaacagt tgggtagtct atcatcagga
      601 acttattgta aaaatgtttt cccattcaac atttaacaac atgcgctatt caaatgccgg
      661 ttatgattgg caggatacaa tgcactatac acttaatacc gaagggaaat tagaaacagt
      721 gtcatatgaa aatgaaccaa actatatctt gcgttacaat tataaataaa tagcgcgttg
      781 accgaatcag aagcgatgaa cggacggaaa atttcctacg gtttaaaaat cgatcgtacg
      841 ctttctctgg attgtaaaac aaattgtttc cgaccttcca ccgacttccg tgcctggctt
      901 gtaagttctg cgatgacttt aaaataacta agcacccggc atcatttgca tatatcgggc
      961 tcgatatgct gcgctggctt gtgatcttat tttattacgc caataaaaaa gactctacct
     1021 tgatagaaga aacgctataa tatgcccgta aactttcggg accctccggc catcaatgct
     1081 ttttgttttt atactaaaaa tcaaatgatc ttgcaaccat ttctaatttt aaagcctgcg
     1141 gtgcttcacc taccaggcct tctgctttca attgtgcact aaatgctttg aacgctgcca
     1201 atgaggtaat aacattttct tcgtttttat gaattgagaa atgtacaaaa ctgcaaccat
     1261 cttctttaat gtacgttgag tataacgtcc ctgtgtcgcc gaggcccctt aactcttcca
     1321 ttactttttg aatgttcgcc ttgttagtag cgacatattc cggctttact gtatattcta
     1381 cttttacggc tctcataatt cgtgttttga aagttaaacc ctgtgatgat ctgcgcgcca
     1441 ttgctgcaca gcctttttaa tatctccggg accaagatct tcttttgtgg ccttttcggt
     1501 taatgacgaa tattcttcat caccggcaaa acgtaaagca attatttgac ctttcgtaag
     1561 gcggctgtct aatacttttc ctgttaaacg aaagcttctg aaattttcct cgctgcgaat
     1621 gatccggtcc tggtttgctg tagcaaactg gcgcagataa aagaacagca atcctaaact
     1681 tagtgccacc aaaagatcaa aaacgtttga gaggctaaac ccacctgaca ccaataaaat
     1741 aattgcaata atgagggaag ctccgatcag cgtgagtgcg agaaagtgaa aacccggaac
     1801 atactgcgca tgctttttaa aattttgttc tttcatctga ggttttttaa aatgtcgccg
     1861 ataaaggact atgacgaata acggataaat aaccggacaa aagctaatct ctttttatct
     1921 aattgtttcg taagagcgaa tgctgctttg ctggacgggg ctttgcaggg cgttgcgagt
     1981 tgacttgcag gttgcagatc gcaggctttc gcctacgatg aaaccgtccg cacatctact
     2041 gtcttgctaa atgaaattgt ccttctgtaa ttgaatgaat atccaatggc tcatgcacat
     2101 tataaatctt gcccgaaaaa gtaccactta ccgtggtgtc gctaatttct gtaaaaacga
     2161 ttttaacgtt atccccatcc gtgatcatag atgtatagtg cgatcctgtt tcgtcactat
     2221 aatttatcaa accctgctgc atggcatcca tcaatgaatc accatacact ttgttgatcg
     2281 tgatcggttg gagatcgttt acaattactg caatcagttc gtcactatca ttagccggat
     2341 ccttttgagc ttccccgccg aaatggtaca cataaccatt atttgaaaaa aacacagccg
     2401 ttatttcatt gtactgtttc tgttcgttat caagtttaaa ttttacgtaa tagccggaag
     2461 tcacagagcc gctgtctttg ctgcaggcca ttaaacacgt gaacaataag gggaaccagt
     2521 aaatcttgca tttagatata cccttcatat cgtgaaattt taaacaatgt acaacgattt
     2581 gaccggtgca gcggttgcaa gcgcttgcat atttatacat ctcgtaaaaa aaccaatggc
     2641 aatgtttatt ggattgcctt ggaggaaacc cttagaaaag aatggttcaa atgagttggt
     2701 gcacaaaacc tatgtggttg agtcaagcta aagaggtggc aaataaagca ttactttgta
     2761 ctaaaacgaa cagcatgaga acgcttcttt gctcaatgtt cgcgttgagc gctatactgc
     2821 aacattttgc cggctatgca caacaaacta caacagataa aattgaagga gtatggaaag
     2881 gaacttcact gtgccaggta aagccatccg cctgccatga tgagagcgtt gtatatcaca
     2941 tctcaaaaaa atctgcaaac ctgtatacaa tccaggcgaa caaaatagtt aacgacgcgg
     3001 aagtggatat gggaacttt
//
LOCUS       DASQJI010000285         3518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2795896,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000285 DASQJI010000000
VERSION     DASQJI010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795896"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..2154)
                     /locus_tag="VEV83_07875"
     CDS             complement(4..2154)
                     /locus_tag="VEV83_07875"
                     /inference="COORDINATES: protein motif:HMM:NF015957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0080135 - regulation of cellular response
                     to stress [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HYK45070.1"
                     /translation="MKKVININFQGRVIPIEETAYEILKQYIESLRQFFAKEEGKEEI
                     INDIEGRIGELFSEVLKKGAACITDADVHTIMNSIGRPEDFEAEEAGAPHTESARPNQ
                     SYERTQYAPRGRLYRDENDKLLGGVCAGIANYFRLDPSLVRILFAIVTFGGFGTGFLI
                     YILLWILLPSRSLETQLRKRLFRNPDDRVVAGVASGIAAYFNISVWIPRLIFALPLVL
                     GVVSSIFQNAFFHFNPFPSVLFGSFGGSLFIIYIVLWAVIPLAHSATEKLEMRGEKVD
                     LNTIKTTIQEDLSNLKTRAEKWGSEVKENFQERGRTLSSEVGPAAKRSGSRLWNAIGI
                     IFKGFFLLVFGCIAFALLMGMIILVMIMIGFMAGGISAFPLKGFIISGFWQNFLAWST
                     LLLFLGVPVIAFLTWIIRRLIRTKSRNHYIGYTFAGLWTLGLIAAICLAASISSDYKT
                     KAGIEEKIELAQPTTGKLFVKALPRNNVRYFESDWYGIHWDDDGSPFYALTEDSLVLR
                     TVQVRIQKSDDSAFHINEIKFSRGANPESAKDAASKILFPVNQTDSIINLPRGFNVSR
                     QEKFRNQQVLIIIDVPVGKRIELDRIIDEYSGFNLELGNGYNDWDWNDDWRNNFDWRP
                     NVEYIMTSDGLKPTHPEESKADNDVQEDEPATDSTHPAAPSQQDSSRYHYQPSKDSQS
                     TTTTTKIRTEVAPAIQSSFKISDVTSTLLERFSL"
     gene            complement(2162..2512)
                     /locus_tag="VEV83_07880"
     CDS             complement(2162..2512)
                     /locus_tag="VEV83_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYK45071.1"
                     /translation="MRKGVLEFCILSVIRQGEVYPSDIVEKMRGANLHILEGTLYPLL
                     TRLKNAGYLTYRWVESNSGPPRKYFSMTETGLAFYGELERTWKELADAVQKLTSLNGT
                     EDVQSVIPNDNQIN"
     gene            complement(2716..>3518)
                     /locus_tag="VEV83_07885"
     CDS             complement(2716..>3518)
                     /locus_tag="VEV83_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45072.1"
                     /translation="NSNTKGVLNKKISDYFLPEQQGVIPAMFFSSAITRDGRKLLVST
                     HPARFMMQAPEKANHLSEYDIDGVDFQSFFQEQNPGDLQFLTAMRMNATFPFVLPNIE
                     LPASPEIDVMDAGFRDNFGHETSLRFVDVFKDWLKENTSKVVLVEIRDRPIGNWSRPY
                     EANSILGLITKPMLLLQNNWFNLQDYYEKDEINYMLDAFGSQFYKVGFSYEAPQNSVS
                     ASLSFHLTAAEKKGIAQAMDDETNNTAVTTIANFLAESAPIAPPLVQK"
BASE COUNT          933 a          813 c          768 g         1004 t
ORIGIN      
        1 agtttataga gagaaccttt ctaaaagcgt tgacgttaca tcagagatct tgaatgatga
       61 ttgaatcgcc ggggcaactt ctgttctgat tttagttgtc gtcgttgttg attgcgaatc
      121 tttcgatggc tggtagtgat agcgcgatga atcttgctga gacggagcag ccggatgagt
      181 tgaatcagtt gctggctcat cttcctgaac gtcattgtca gctttcgatt cttccggatg
      241 agtcggtttc aaaccgtcac ttgtcattat gtattctaca ttcggccgcc agtcaaaatt
      301 atttctccag tcatcgttcc agtcccaatc attgtagcca ttaccaagct caagattaaa
      361 tccactgtat tcatcaatga tacggtcgag ctctattcgt ttgcctaccg gcacatcaat
      421 aattatcaag acttgctggt tccgaaattt ttcctgcctg gaaacattga acccacgcgg
      481 caaattaatt atgctgtccg tttgatttac cggaaaaagg atcttagagg cagcatcctt
      541 tgctgactca gggtttgcac cccggctaaa ttttatttca ttgatgtgaa aagcgctgtc
      601 gtcacttttt tgaattctta cctgcacggt gcgtaagaca aggctgtctt cagttaatgc
      661 ataaaaaggg gaaccgtcat cgtcccaatg aataccatac caatcgcttt caaaataccg
      721 gacgttattg cgaggcagtg ctttgacaaa taactttccg gtcgtgggtt gagccagttc
      781 tattttttct tcaattccgg ctttcgtttt ataatcactc gaaatggaag ctgccaggca
      841 aattgcggcg atcaaaccga gtgtccacaa tccggcgaac gtatagccta tataatgatt
      901 gcgcgatttg gtgcgtatga gcctccttat gatccatgta agaaaagcga tcacaggcac
      961 gccgagaaac agaagtaacg tgctccaggc tagaaaattt tgccagaaac cggatatgat
     1021 aaaccctttc aacgggaatg cactaatgcc acctgccatg aaaccgatca taatcatgac
     1081 aagtatgatc attcccatca ataaagcgaa agctatacag ccgaagacga gtaagaagaa
     1141 gcctttaaaa ataattccaa tcgcattcca caacctgctg cctgacctct ttgctgcggg
     1201 gccaacttca gacgaaagtg tgcgtccgcg ttcctggaag ttttccttca cttcgctgcc
     1261 ccatttttcg gcgcgtgtct taagattgct cagatcttcc tggattgtcg ttttgatagt
     1321 attcaaatcc accttttcac cacgcatttc aagtttttcc gttgcactgt gtgcaagtgg
     1381 gatcacggcc cacagaacta tatagataat gaacagtgat ccgccgaaag agccaaacaa
     1441 tactgacggg aacggattaa aatgaaagaa tgcattctga aatatggaac tgaccacacc
     1501 aagcacgagt ggtaaagcga agatcaatct cgggatccac actgagatat tgaagtaagc
     1561 agctataccg ctggcaacgc cggccacaac acggtcatcc ggattacgaa acaatctttt
     1621 gcgcaactga gtttccaacg atctcgaagg aagcaggatc cacagcaaga tgtaaataag
     1681 gaacccggtg ccaaagccgc caaacgtcac aattgcaaat agtatcctga ctaacgatgg
     1741 gtcgagccta aaataatttg caatgccggc gcaaacacca cctaataatt tatcattctc
     1801 gtcgcggtac aggcggcctc ttggagcgta ttgggtcctt tcatacgatt gatttggccg
     1861 ggcgctttcg gtgtgaggag cgccggcttc ttcagcttcg aaatcttccg ggcgaccgat
     1921 gctgttcatg atagtgtgca cgtcggcgtc agtaatacag gccgcacctt tcttcaacac
     1981 ttcgctgaac aattctccaa ttcgtccttc gatatcattg atgatctctt cttttccctc
     2041 ttccttggcg aagaactgtc tcaggctttc aatatattgt tttaaaattt cgtaggcggt
     2101 ttcctcgatg ggaattacgc ggccctgaaa gtttatatta attacctttt tcattttact
     2161 tttagtttat ttggttatcg ttggggatta ctgactgcac gtcttctgtg ccatttagcg
     2221 aagtgagttt ctgtacagca tctgccaatt ctttccaggt gcgctccaat tcgccataaa
     2281 aggccagccc cgtttcagtc atcgaaaaat atttccgtgg agggcctgag ttactttcaa
     2341 cccaccggta ggttaagtat cccgcgtttt taagccgtgt aagcaaagga taaagtgtcc
     2401 cttctaaaat atggaggttg gcgcccctca ttttttcaac tatgtcactc ggatacactt
     2461 caccctggcg aataactgaa agaatgcaga actccagaac accttttctc atttggcttg
     2521 ttgtgttttg aatatccata cagcgttttt aaaatcttaa tgatgacaca aagctaatga
     2581 gattttcaat actatgcaat gcataataca agcttttgtt aggtaattgc ctaggctaac
     2641 taatgtacaa tggcaaacgc atggccccca gcaacttgcg gctgcatgag aaattttctg
     2701 aaattatgag tggttctatt tttggacgag cgggggcgct ataggtgcag attcagccaa
     2761 aaaattagcg atagtcgtta cagcggtgtt attcgtttca tcatccatgg cctgggcgat
     2821 gccctttttt tcagctgcag tcaagtggaa gctaagcgaa gccgaaacgg aattttgagg
     2881 agcctcataa ctgaatccta ctttgtagaa ttgcgaaccg aatgcatcga gcatgtagtt
     2941 gatctcgtcc ttttcatagt agtcctgtaa attgaaccaa ttgttctgca ataacaacat
     3001 cggtttagtg atgaggccca atatcgaatt tgcttcgtac gggcgcgacc agttaccgat
     3061 aggcctgtcg cggatttcaa caaggacaac cttggaggta ttttccttca accagtcttt
     3121 gaaaacatcc acgaagcgca agctcgtctc atgcccgaaa ttgtcgcgaa agccagcgtc
     3181 catcacgtca atttccgggc tggcaggcag ctcgatattt ggaagaacga acggaaacgt
     3241 tgcattcatt cgcatcgccg tgaggaattg cagatcgccg ggattttgct cctggaaaaa
     3301 gctttgaaaa tcgactccgt caatgtcgta ttcgcttaag tggttagctt tctcaggcgc
     3361 ctgcatcatg aaacgcgcag ggtgtgttga taccaacagc tttcttccat cccgggtgat
     3421 tgctgaactg aaaaacatcg cagggataac accctgttgt tcgggcaaaa aataatcgct
     3481 gatctttttg ttcaatacgc cttttgtatt ggaattta
//
LOCUS       DASQJI010000286         7346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2181553,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000286 DASQJI010000000
VERSION     DASQJI010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7346
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2181553"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1372)
                     /gene="hutH"
                     /locus_tag="VEV83_07890"
     CDS             complement(<1..1372)
                     /gene="hutH"
                     /locus_tag="VEV83_07890"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HYK45073.1"
                     /translation="MSAEFFYGKDELTIGKTVALANGSLHGILAKEVVQKIKTSQHHV
                     QQIVEHHKTVYGVNTGFGILSNTKISEEDTATLQHKILQSHSVGVGNAIPVEIAKIML
                     ITKVHALAQGSSGVQMATVERILWHIENDVIPFVPEKGSVGASGDLAPLAHLFLPLIG
                     LGQVFYKGVLRDTMDILQNEKMMPVKLGPKEGLALINGTQFILAYAVKAAQRLHNCLE
                     AADIIGAMSLEALTGTKAPFDERLHALRPYKGNKLVAQRLRLLLHQSAIMQSHVDCGR
                     VQDPYSLRCMPQVHGATRNAWLHLKELTTIELNSVTDNPIILDETDTISGGNFHGQPL
                     ALPLDYACFAAAEIGNISDRRCYLLLEGKWGLPMLLMKNVGLNSGFMIPQYTTAALVT
                     ENKTLCFPASADSIPTSLGQEDHVSMGSISGRKLCQVLDNLEYILAIELMSACQAIEF
                     RRPLQSS"
     gene            complement(1380..1862)
                     /locus_tag="VEV83_07895"
     CDS             complement(1380..1862)
                     /locus_tag="VEV83_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HYK45074.1"
                     /translation="MNFYQQLGFLVFGSRLKRLADTFIGDVNRIYKKHRIHFDASWFP
                     VFYILSEKKEVSIKEISDELNVSHSAISQLVGSLQQKGLIRSLVSKTDARHRSITFTA
                     KGEKLLQQIQPVWDALEKAMEKLTNESAQSRKILLALTALEKNIQHKTVFERVEKILK
                     "
     gene            2041..2499
                     /locus_tag="VEV83_07900"
     CDS             2041..2499
                     /locus_tag="VEV83_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45075.1"
                     /translation="MKSTLSLTSALAFCILFSSCIKSLDVTVSQTNPISGSWYISDAS
                     TYDSYGWYSFDAGTPGVFTFYDNGNAQYSDDYGTMQGNWHMDLVSTGYYNSNGVFQTD
                     THNNFQFQVSDGYGNNIDLYFDDISFAGNNQFIATYYDGKNIQRFTFTRY"
     gene            2693..3385
                     /locus_tag="VEV83_07905"
     CDS             2693..3385
                     /locus_tag="VEV83_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45076.1"
                     /translation="MNIILDIKRLHKSFKSGGKPLTVLHDVSFSVAEGSTVSIVGPSG
                     SGKTTLLGLCAGLDHASSGFVELNYINLGKLNEDKLAQVRNKFVGFIFQNFQLLPTLT
                     ALENVMVPLELRREKNIRRRSADLLDKVGLSDRAHHYPSQLSGGEQQRVALARAFSND
                     PRILFADEPTGNLDAETSERITSLIFDLNKEAGTTLIIVTHNPELASKTQRIIRLKAG
                     SIISDEQTNQRA"
     gene            3393..5957
                     /locus_tag="VEV83_07910"
     CDS             3393..5957
                     /locus_tag="VEV83_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK45077.1"
                     /translation="MDRDRIKYTREVSFGWLCRMAWRDSRKNRGRLFLFISSIIFGVA
                     AMVAIHSFRYNLQRDVDNQAAELLGADLVISGNDTIKQKARPTFDSLGDKRSKECTFA
                     SMAYFPKQRGTRLVQVRALEGSFPYYGRIETIPAVASTSFRGNRAALVDKTLMLQFDA
                     HTGDSIKLGDVVFVIAGSLEKAPRQTGLSSSIAPVVYIPFKYLMQTGLINTGSHVDYN
                     YYYKYDRPVDINAVVKHIEPVIRKEGLNFNTVETQKANVGRFFTDLTRFLALVAFIAL
                     LLGCIGVASSVHVYVREKVHAIAIMRCLGTKASQAFLIYLIQITIIGFIGSVVGAVLG
                     VFVQRILPVVLKDFLPFKIAVTISWKAIAEGITLGLVISVLFALLPLISTRKISPLNT
                     LRISDENVESLRDPFAWLVYFLILLFVTAFAFLQLGDWKQSIFFTLSIIAAFVLLTLV
                     AFLLMWFVRMIIKSSWSYLWRQGFANLYRPNNQTMILIVSIGLSTAFICTLSFIEYML
                     IKRITISGSGNQPNMVVYDIQSSQEPLLVSFTQEERLPVLQKVPVVTMRLQSINGKTA
                     KDVKNDTTLPYSRWVFNNEFRVTYRDYLQESEKITAGKWVSKADTTNDYVPISLEERF
                     AESIPAKIGDSIVFNVQGMFVSTVVESIRQVDWNRIETNFRLVFPVGVLEDAPQIHVL
                     LTRVPSKEASVNYQEAVVKKFPNVSIIDLGLVLAVLDEVLNRIGYVIHFMAGFSVITG
                     LVVLMASVRISKYQRMHESVLLRTLGASRKQIFTITLLEYFFLGALSALTGILIAVGA
                     SWLLATYQFKFPFTLNWVPAGILFSVIVVVTVGIGLVNSREVLRRSPLEILRAEVE"
     gene            6152..6931
                     /locus_tag="VEV83_07915"
     CDS             6152..6931
                     /locus_tag="VEV83_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HYK45078.1"
                     /translation="MVRTSVFDGVNCCVAFPACRTGRPSSFRFHGIRNMVQKSVVAIA
                     LMFAASCNDSKKPVQQNAPIKKESASKPTNLKTILFFGNSLTAGYGLDDISESFPSLI
                     QDKIDSMRLPYEAINAGVSGETSADGNSRIDWLLKQKVDVFVLELGGNDGLRGISPKE
                     TMKNLQSIIDKVKAKYPAAKLVLLGMQIPPNMGKNYSAQFKQIYPQLAAKNKMTLLPF
                     LLEGVGGIASLNQADGIHPTAAGSKIVAENVWKVLEGVLVE"
BASE COUNT         1948 a         1667 c         1651 g         2080 t
ORIGIN      
        1 cgctgctctg taatggcctc cgaaattcaa tggcctggca ggcgctcatc aattcaatcg
       61 caaggatgta ctcaagatta tccagcacct ggcaaagttt tcttccgctg atgctaccca
      121 tgctcacatg gtcttcctgt ccgagcgatg ttggaatact gtcggcactc gccgggaaac
      181 aaagtgtttt attttctgtc actaaagcag cagttgtata ctgcgggatc ataaagccac
      241 tgttcaagcc cacgtttttc atcagcaaca tgggcaatcc ccatttgcct tcaagcaata
      301 aataacaacg gcggtcagaa atatttccga tctctgcagc cgcaaaacac gcataatcca
      361 atggcagcgc taaaggttgt ccatgaaaat ttccgccgct tatggtatcg gtctcgtcca
      421 ggataatagg attatccgtg actgaattca gttcgattgt cgttaattcc ttcaggtgca
      481 gccacgcatt tcgggttgcg ccgtgcacct gtggcataca acgcaacgaa taggggtcct
      541 gcactcttcc acaatctaca tggctctgca tgatcgccga ctgatgtaaa agcaaacgca
      601 ggcgctgcgc aaccagctta ttgcccttat atgggcgcaa agcgtgaaga cgttcatcaa
      661 atggcgcttt cgttccggtg agagcttcga ggctcatcgc gccgataatg tcagcagctt
      721 ctaaacaatt gtgtaaacgt tgggcagctt ttaccgcata agccaaaata aattgtgtgc
      781 cgttgatcag cgccagtcct tctttaggcc caagcttaac aggcatcatc ttttcgttct
      841 gcaatatatc cattgtatca cgcagaacgc ctttataaaa aacctgtcca agcccgatca
      901 aaggcaggaa caggtgagcg agcggcgcaa gatcgccgga agcgccgaca gaaccttttt
      961 ccggaacaaa aggaatgaca tcattttcta tgtgccataa aattctttcg acggtcgcca
     1021 tctgtacacc gctggatccc tgggcaagcg catgcacttt tgtgatcagc attattttcg
     1081 cgatctccac cggtattgcg tttccaaccc ccacgctatg gctttgtaat atcttatgtt
     1141 gcagcgttgc cgtatcttct tccgagatct ttgtgtttga aagtatgccg aagccggtgt
     1201 tcacaccata gacagtttta tggtgctcca cgatctgctg cacgtgatgc tgacttgtct
     1261 ttattttttg aacgacttct tttgcgagga tgccgtgcaa tgatccgttc gccagcgcaa
     1321 cagttttccc gatagtcaat tcatcttttc cataaaaaaa ttctgcgctc atacgacatt
     1381 tatttcaaaa ttttttcaac ccgttcaaaa accgttttat gctgaatgtt tttttccaac
     1441 gccgttaagg ccagcaaaat cttcctgctc tgtgcgctct cattggttag tttttccatt
     1501 gccttttcta gcgcatccca caccggctgt atttgttgca gcagtttttc tccttttgca
     1561 gtaaaagtta tcgaccggtg acgtgcatcg gtctttgata caagggacct gataagcccc
     1621 ttctgttgca ggctgccaac caattggctg atcgccgaat gagatacgtt caactcatcc
     1681 gagatctctt ttattgaaac ttcctttttt tccgaaagaa tatagaacac ggggaaccat
     1741 gacgcatcaa agtgtatccg gtgttttttg tagatccggt taacgtcgcc gataaacgtg
     1801 tcagccagtc tctttaaccg gctgccgaat acaagaaacc cgagttgctg ataaaaattc
     1861 actagacaaa tatataagta cttatataat tttcaaacac cgttaagaaa aatgatggcg
     1921 ctaagcttca aaatgatttt aattttttta acgaatacac tttcaacccc gacgtgttgc
     1981 tcttatctca ggtttagttc cacggtacat gctcaaaaac aaacattaaa cgcaattgtt
     2041 atgaaatcaa ctttatcgct aacttctgcc ctggctttct gcatcctttt ttcatcgtgc
     2101 atcaaatccc ttgacgtaac ggtttctcaa actaacccga ttagcggatc gtggtatatc
     2161 agtgatgcct ccacttacga cagctatgga tggtattcat tcgacgcagg aacgcctggt
     2221 gtgtttacct tttacgacaa tggcaacgca caatattcgg atgattacgg caccatgcag
     2281 ggcaactggc acatggatct cgtgtcgacc ggctattaca atagcaacgg agtatttcaa
     2341 actgacacgc acaataattt tcagttccag gtatcagacg gctatggcaa caatattgac
     2401 ctgtattttg acgatataag ctttgccggc aacaaccagt tcatcgcaac ttattatgac
     2461 ggaaagaaca tacagcgttt tacgtttacg agatattaac tttagacctc ttaaatgaat
     2521 tggaagcaca tgccgtctca tgtgctttat tttttatcca tcttcaactt tgataagttt
     2581 cgcgagtcga tacagtttac ttaaattctt gctttaagtg acctgcggta tgcatgttgt
     2641 ttactattga aataaattcg aaggggttta tttttaatca acaagaacag caatgaatat
     2701 catccttgat ataaagcggc tgcataaaag ttttaagagt ggtggaaagc cgttaacggt
     2761 gctgcatgat gtcagctttt cagtcgccga aggatcaacc gtatctatcg ttggtccatc
     2821 gggcagtggt aaaacaacac tactgggttt atgtgcaggg ctcgatcatg cgagctcggg
     2881 ctttgttgaa ttgaattaca tcaaccttgg caaactcaac gaagacaagc tcgcacaggt
     2941 gcgcaataaa ttcgttggct tcatctttca aaatttccag ctcctcccaa ctttaacggc
     3001 gctggaaaat gtaatggtcc cgcttgagct ccgtcgtgaa aaaaatataa gacgcaggtc
     3061 ggcggacctg ctcgataaag taggcctgtc tgatcgcgcc caccactacc cttcccagct
     3121 ttccggcggc gagcaacaac gcgttgcatt ggcaagagct ttctcgaacg atccacgcat
     3181 tttatttgcc gatgaaccga ctggcaacct cgatgcggag accagcgaaa gaataaccag
     3241 tctcatcttt gatctcaaca aagaagctgg caccactttg atcattgtga cacacaaccc
     3301 cgaactcgct tctaaaacgc agcgcattat ccgtttaaag gctggctcga tcatttcaga
     3361 cgaacaaaca aatcaaagag cataacggcc agatggacag ggacaggata aagtatacaa
     3421 gggaagtgag ctttggctgg ttatgccgca tggcctggcg cgatagccgg aaaaatcgcg
     3481 gcaggttatt tcttttcatt tcatcgatca ttttcggcgt tgcagcgatg gttgcaattc
     3541 attcgttcag gtacaatctt cagcgcgatg tagacaacca ggcagcagaa ctattgggtg
     3601 cggacctggt tatttcaggc aacgatacca tcaaacaaaa ggcgaggcca acattcgatt
     3661 ctttgggtga caaacgatcg aaagaatgca cgtttgcatc gatggcttat tttccaaaac
     3721 aaagaggcac gcggctcgtg caggtgcgcg ccctcgaagg cagttttcct tattacggca
     3781 ggatcgaaac gattccggct gtcgccagca cttcctttcg aggcaatcgg gcagcgcttg
     3841 tagacaaaac actcatgcta cagttcgatg cgcacaccgg cgattcgatc aaattgggcg
     3901 atgttgtttt tgtaatagcg ggaagcctcg aaaaagcacc gcgccaaaca ggtctgtcgt
     3961 cgagtatcgc gccggtcgtt tacattccgt tcaaatacct gatgcaaacc ggtttgatca
     4021 acactggcag tcatgtcgat tacaattatt actataaata cgaccggccg gtagatatca
     4081 atgctgttgt gaagcatatt gaaccagtga taagaaagga aggactaaat tttaatacag
     4141 tcgaaacaca gaaagcaaac gttggccggt tctttaccga ccttacgcgt ttcctggcgc
     4201 tcgttgcatt catcgcttta ttgttaggtt gcattggtgt tgcaagctcg gtacatgtat
     4261 atgtgcgtga aaaggtccac gcaattgcga taatgcgttg ccttggcaca aaggcctcgc
     4321 aggcattttt aatttatctc atccaaataa caatcattgg attcatcggg tcggtcgttg
     4381 gagcagtgct tggtgtgttc gtacaacgca ttttgcccgt cgtactgaaa gattttttgc
     4441 ctttcaaaat tgcggtgacc atttcatgga aggcaattgc agaaggaatt acgcttggat
     4501 tggtgatctc cgtcctgttt gcattattgc ctttgatatc gacgcgaaaa atatctccct
     4561 tgaacacatt gagaatatcg gatgaaaatg tcgagtctct tcgcgaccct tttgcatggc
     4621 tcgtctattt cctgatcctg ctgtttgtta cagcctttgc gtttttgcaa cttggcgatt
     4681 ggaagcaaag tatttttttc acattgagca ttatcgcagc ttttgttttg ttgaccctgg
     4741 ttgcttttct cttaatgtgg tttgtacgaa tgatcattaa aagttcatgg agttatttgt
     4801 ggaggcaagg ttttgctaac ctatatcgtc caaacaatca aacgatgata cttattgtgt
     4861 ctattggatt gagcactgcg tttatctgca cgttgtcgtt catagaatac atgcttatta
     4921 agcgcatcac aatatccgga agcggtaacc agccaaatat ggtggtgtac gatattcagt
     4981 cgagccagga acctttgctt gtttcgttta cacaagaaga aaggctaccg gtactgcaaa
     5041 aagtgcctgt tgtaacgatg cggctgcagt cgatcaatgg taaaacggct aaagatgtaa
     5101 agaacgatac aacattgccg tattcacgtt gggtattcaa caacgagttc cgtgtcacgt
     5161 atcgcgacta tctgcaagaa tctgaaaaga taactgccgg caaatgggtg agtaaagccg
     5221 atacaacgaa cgattatgtc ccgatttccc ttgaagaacg gtttgctgaa agcattcctg
     5281 caaaaattgg cgacagtatt gtgttcaatg tacagggcat gttcgtatcc accgttgttg
     5341 aaagcatccg gcaggttgac tggaaccgga tagaaacgaa tttcaggctt gtgtttcccg
     5401 ttggagtttt agaagacgct ccacagattc acgtgttgct tacgcgcgta ccgtcaaaag
     5461 aggcttctgt gaattaccag gaggcagttg tgaaaaaatt tccaaacgtt tccatcattg
     5521 acctgggcct tgtgctcgca gtgctcgatg aagtgcttaa ccgcatcggt tatgtaattc
     5581 actttatggc cgggtttagc gtcatcactg gattagttgt tttaatggcg tcggtacgca
     5641 tcagcaaata ccagcgtatg catgaaagcg tattattacg tacactcggt gcgagtcgca
     5701 aacaaatatt taccataacg ttacttgaat acttttttct cggcgcgtta tcagcactca
     5761 ccggcatcct catagcggtt ggcgccagtt ggctattggc gacctatcaa tttaaatttc
     5821 cgttcacact caactgggtt ccggctggta tattattttc ggtgattgta gtggtgacag
     5881 ttggaatagg cttggtaaac agccgcgagg tgttgcgaag atcaccgctc gaaattttgc
     5941 gggcggaggt agaatgagat atcgatgcat gcagatctct ccttcgtcga catgacaggg
     6001 gttgtcatcc cggctgatca gcggtgctgg agcagacgtg tccggaagag caatccgcaa
     6061 cgcatctgta cagcaaagcg agaaatctca acgttagctc aacgtttttc ggtcggactg
     6121 ataacgaatt tgcaccgcaa aaaaaatttt tatggtacga acttcggttt ttgatggcgt
     6181 caattgttgc gtcgcattcc ctgcctgccg gacaggcagg ccttcatcgt tccgatttca
     6241 tggcatcagg aacatggttc aaaaaagcgt tgttgcaata gcgctcatgt tcgccgcttc
     6301 atgcaatgac agtaagaagc cggttcagca aaacgcgccg ataaaaaaag aaagcgcgtc
     6361 aaaaccaacc aatttgaaaa cgattttgtt ttttggcaat agtcttacag cagggtacgg
     6421 tcttgatgat atttcagaat cgtttccatc acttatacag gataagatcg attctatgcg
     6481 tttaccgtat gaagcgatca acgcgggcgt gagtggtgaa acatcagccg acggaaacag
     6541 tcgcatcgac tggttactga aacaaaaagt ggatgtattc gtacttgaac tcggtggcaa
     6601 cgacggcttg cgcggcatat cgccaaaaga gacgatgaaa aatctgcaat cgatcattga
     6661 taaagtaaag gcgaagtatc ccgccgctaa acttgttttg ttgggaatgc agatcccgcc
     6721 gaacatggga aagaattact cagctcaatt taaacagata tatccacaac ttgctgcaaa
     6781 aaacaaaatg acgttacttc catttctgct ggaaggcgtt ggcggtattg catcattgaa
     6841 ccaggccgat ggaattcatc caaccgcagc cggcagcaag atcgtcgccg aaaatgtgtg
     6901 gaaagttttg gaaggtgttc tcgttgaatg attttcgggt acagtatctc ttttcatttt
     6961 ttcttttccc aacccatgat cgtttgacgt ttgaaaaaaa aattttactt ttaacagggc
     7021 aaatgatcgg aggtggcgcg tctctttttt gagagaaatt actccaactg tttcgttata
     7081 tcttaccttt tgaaagctgc ggatgcaact aattacgtca actgtaatag ttgtttcatc
     7141 aacgcccggt ttctgttcgg ttgatcgata aacaagcttt gatgatgcgg tgctgagtag
     7201 atgatcaata gctacataac aggttttgtg atctgtaccc tggcgatatg gcgcattagc
     7261 cacttgtttt cacaggaaga tggacccttt gataccgtaa tcaaattcag gaagcttttc
     7321 gggcagggat tcttcggaaa ccctgc
//
LOCUS       DASQJI010000287        18642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2642669,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000287 DASQJI010000000
VERSION     DASQJI010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 18642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18642
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2642669"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VEV83_07920"
     CDS             complement(<1..386)
                     /locus_tag="VEV83_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45079.1"
                     /translation="MGSITTILLLALFTGTHGTFVTVDTTLHVKEKAFIEGTYSDFYV
                     DNLNNVYLINTNNQVKKIDAKGDSIAVSNSLKKYGDVYSMDVSNPLKILVHHKDFGTL
                     LILDRFLSRLNVIDLRKIGILQASAAA"
     gene            complement(374..1132)
                     /locus_tag="VEV83_07925"
     CDS             complement(374..1132)
                     /locus_tag="VEV83_07925"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HYK45080.1"
                     /translation="MTVAPGKKIYFLSDFHLGAPDFSSSLSRERKIVAFLEHIRADAQ
                     QIIIAGDVFDFWYEYKTVVPKHFVRLLGKLAEITDSGIPIILFAGNHDMWMRGYFQNE
                     LNIPVFFQPKTFEWNKKKFFIGHGDGLGPGDHGYKFIKKIFRNKFCQWLFGQLHPTWG
                     MSLANYFSRKSRAKTGAADSVFLGEDSEWLIIFSREMLAKEHFDFFIFGHRHLPMNIE
                     LNDNSRYINLGDWITSFTYAVFDGNNVELKKWEA"
     gene            complement(1153..1797)
                     /locus_tag="VEV83_07930"
     CDS             complement(1153..1797)
                     /locus_tag="VEV83_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HYK45081.1"
                     /translation="MKESVAKKNILKKIKQALANPVPVPFPEKETHPDMFTSSTMEPE
                     IEFAEKFTSLQGRFSFCANERELVRQLEALFTTREWKNVFLREDDVAETLKSNGLKID
                     FSDDLEGCDCAITSCEYLVARTGSIAMSSAQKSGRTVSVYAPVHICIAYTKQLVYDIK
                     DGLDLLTKKYNGKLPSLITFATGPSRTADIEKTLVTGVHGPKEVFCFLVEGPNP"
     gene            complement(1840..3903)
                     /gene="ftsH"
                     /locus_tag="VEV83_07935"
     CDS             complement(1840..3903)
                     /gene="ftsH"
                     /locus_tag="VEV83_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HYK45082.1"
                     /translation="MKPDLYEKGGNDKGPRRGPRFSIYWIYAFVAIILIAYNVLNLGY
                     ADIQTITEQEFKEKMLKPGDVAKIDEVRNKELVRVYIKADSLDKPYYHQDEKFKQPLS
                     KDAATKPLFEFKVTNWESFNRELDDFYKTHGMDEVPATVYDEGQWFSPLANTIVTVLL
                     FVGLWILLMRKVGGGGGSGGPGGIFNIGKSRAQLFDKGTKVNITFTDVAGLDEAKVEV
                     MEIVDFLKNPKKYTALGGKIPKGALLIGPPGTGKTLLAKAMAGEAQVPFFSMSGSDFV
                     ELFVGVGASRVRDLFKQAREKAPCIIFIDEIDAIGRARGRNAIVSNDERENTLNQLLV
                     EMDGFSGESGIIILAATNRPDVLDTALLRPGRFDRQISIDRPDVKGREDIFRVHLKPI
                     KVSQKLNVHKLAEQTPGFAGADIANVCNEAALIAARKGKEMVDMADFQDAIDRVIGGL
                     EKKNKIISPEEKEIIAYHEAGHAICGWYLEHAYPLLKVTIVPRGTAALGYAQYTPKEQ
                     YLYNTDQLMDQLCMTLGGRASEEIFFGKISTGASNDLQQITKTAYAMITVYGMNEKVG
                     NISFYDPTQDNTFTKPYSEETGKMIDEEVRVLIDAAYQKTKALLREKKKQVEILAKEL
                     LVKEVLFQSDVETLIGKRPFDDRKHEQENGEEEGENHQDNGTISAGVPPYDSSITMPA
                     PKPAP"
     gene            complement(3984..4382)
                     /gene="rsfS"
                     /locus_tag="VEV83_07940"
     CDS             complement(3984..4382)
                     /gene="rsfS"
                     /locus_tag="VEV83_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HYK45083.1"
                     /translation="MEPLTVLASRKKNTITRLNANSRIFKLIIKAIQEKKGEQIVSLD
                     LRKIPEAVSDYFIVCQATTNIQVRAIADHVEDTIKKQLGELPYRHEGYQALQWVLIDY
                     INVVVHVMQPEARKFYKLEEMWSDAPLQEY"
     gene            4524..5285
                     /locus_tag="VEV83_07945"
     CDS             4524..5285
                     /locus_tag="VEV83_07945"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HYK45084.1"
                     /translation="MQAAPTNNVIGKPFVQLNSVDSTNNYAMGRVQKGLAKHGEAYFA
                     WEQTKGKGQREKQWLSARGENIILSVVLDTSAFFLHKQFFLSMAAALSARDLFNKYTT
                     NKALIKWPNDIYYGDRKAGGILIENVIHGDQWRFAVVGFGVNINQTLFDASLKNATSL
                     KQVTGESYDVVRLSEELCSIMQQRFLQLQNGEQQSILAEYNSALYRKQAVTKFKARSR
                     IFSATVNYVDENGRLFIGGAAEESFEFGEVEWLPD"
     gene            complement(5282..5599)
                     /locus_tag="VEV83_07950"
     CDS             complement(5282..5599)
                     /locus_tag="VEV83_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HYK45085.1"
                     /translation="MNVYIKTNSALARLAARILKTDRMAVTVRRTIYLHNCSKEEFLK
                     NKNWVCHEVVHVRQYKQLGTFAFLAAYLFQCLINGYNNNKFEKEARKKESNHMMMDGV
                     EFI"
     gene            5668..6264
                     /locus_tag="VEV83_07955"
     CDS             5668..6264
                     /locus_tag="VEV83_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase hexapeptide repeat family protein"
                     /protein_id="HYK45086.1"
                     /translation="MIYAFKEFIPVVDASSFIHPQSCVTGNVWIGKDVYVGPGAAIRG
                     DWGRIIIEDGCNVQENCVIHMFPGVTVMLKENAHIGHGAIIHGATIGKNCLVGMNSVI
                     MDNVELGDESIVGALSFVKAGKKFPARTLLAGNPAKIISQVSDEMIAWKSDGTKLYQQ
                     LPVEMHAYWRQCEPLRAGPKDQPIQERSYQTWKETKDE"
     gene            6257..6874
                     /locus_tag="VEV83_07960"
     CDS             6257..6874
                     /locus_tag="VEV83_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45087.1"
                     /translation="MNKRLKQYSILGIIFCAFASCSAQQNSVVQQVDALGRSETIEDS
                     VIRRLRDNNDLVIAYAVENFAWVRSANYLIIAKNSNEWTGYHYYVSLMHNPGQPAAPG
                     NINPAEVNKLSCDSLLEYISKTKAWTIKGDSGENFCPNSNQSCNINDASGARLWIITK
                     QGSVNPSYYAPEFFEECCPGNKDRALFLSIAKKIEQIVSVDAISK"
     gene            6916..9378
                     /locus_tag="VEV83_07965"
     CDS             6916..9378
                     /locus_tag="VEV83_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012787909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
                     ligase/alanine racemase"
                     /protein_id="HYK45088.1"
                     /translation="MYTIENIASVLDAEARLVQADAEIMQLVTDSRRIIFPETSLFFP
                     IITEHRDAHIFVPEVYERGVRNLVVRKGFDIAAFPHGNFIFVDDTLIALQHLTACHRR
                     KFTYPVIGITGSNGKTIVKEWLYQLLSPDFNIVRSPRSYNSQIGVPLSVWQMNEHYDL
                     AIIEAGVSEPEEMQRLAEIIQPSIGVLTNIGNAHDENFTSTEQKAQEKALLFKSCETV
                     ILNGADPAIVDIVKSESKAKLLRWGTENNDDICVVSQQRNEINSVLTLEHSGSVFTIE
                     IPFTDDASIQNAIICTSVLLYLNVTIELIQQRMPLLQSIDMRLQLIPGINECAVINDS
                     YSFDIASFAVALDFMKQQNQFPEKTVILSDMPGADNRGAYAEIIFMLKARDIRRVMVI
                     GEHWNTYYPFLQDAIADVQYFPSTESFLYQFSTNHFRNELILLKGARKFGFENIASVL
                     QHKVHQTVMEINLTSMIHNLNVYRKILKPGVKIMAMVKAAGYGSGSAEIANVLQFHKV
                     DYLAVAYADEGVELRKANIRSPIMVMSTDEQAFESVIQYNLEPEIYSLNMCRKFDRYL
                     DKQGLLQYPVHIKLDTGMHRLGFDISELNDLTDLLHSSNRMVVKSVFSHLAAGEDPEE
                     DEFTSLQAQLFIRGCLQLEESLGYSFTRHLSNSSATLRKKELQFDMVRLGIGLYGIDN
                     THARKLQLKPVVSLKTTIAQLRKIKKGETVGYNRLGRLHHDAVIATLRIGYADGLKRC
                     LSNGVGKISVKGKTAPVIGSVAMDMTMVDVTGIRGIHEDDEVEIFGSHIPLEDVAAAC
                     NTISYEILTGISQRVKRVYVEE"
     gene            9529..10200
                     /locus_tag="VEV83_07970"
     CDS             9529..10200
                     /locus_tag="VEV83_07970"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HYK45089.1"
                     /translation="MKGRNVAFIIILILAADQALKFYIKTHYTLGEEHNMMGSWFRLH
                     FVENEGMAWGLKFGGGLGKILLTLFRLVAVILGTFYLHTIVKKKYHPGFIICASLIYA
                     GAFGNLIDSMFYGLIFSNSTPFGVATLFPPDGGYASFFHGQVVDMLYFPIIQTHYPSW
                     FPIASWRGQEFEFFSPVFNLADASISVGVIVLLLWQKKFFPKKHPDNHPVETHSEIKD
                     EIRAA"
     gene            complement(10234..11151)
                     /locus_tag="VEV83_07975"
     CDS             complement(10234..11151)
                     /locus_tag="VEV83_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45090.1"
                     /translation="MKSIFSGILLVSCSVLLLCSSCQKELSSEVGLLDSAKGTLKDST
                     GNCMPVTVHGTYYDGITPGADTCYIDLRVNVTETGSYSISTDMQNGFKFVDSGFFNAI
                     GTNIIKLKPIGTPIIPVATIFSVSFDSSTCSFAVTVQDSTGTGLGGGGDTTGTGGGGD
                     TGDSTAAGTWKFTDSTNNTFYTGVFQDPGGIFNLDSWGWQLTLLGSNNLVTADTTFFL
                     SVQMPSSQVAPGTYLTNASPSSGWGLSDQTGAVVYYRADATTPQIIKVNITSYDDATK
                     VVKGNFSGTAVFNSSTVYITHGAFNTTLP"
     gene            complement(11231..12634)
                     /gene="fumC"
                     /locus_tag="VEV83_07980"
     CDS             complement(11231..12634)
                     /gene="fumC"
                     /locus_tag="VEV83_07980"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HYK45091.1"
                     /translation="MNYRIEKDTMGEVKVPSDVYWGAQTQRSIENFKIAQDTDKMPAP
                     IIKAFAYLKKAAALANNELGVLPDEKRDAIAQVCDEILAGKLDDQFPLVVWQTGSGTQ
                     SNMNVNEVIAYRAHVQKGGALADKEKLLHPNDDVNKSQSSNDTFPTAMHIAAYKMVAE
                     TTIPGIEKLRDTLKEKSRAFMHVVKIGRTHFMDATPLTLGQEFSGYVSQLDHGLRAIK
                     NSLQHLSELALGGTAVGTGINTPNGYAELVATKIAELTGLPFVTAENKFESLASHDAI
                     VEAHGALKTIAVSLMKIANDIRMLSSGPRSGIGEIFIPDNEPGSSIMPGKVNPTQCEA
                     LTMISAQVMGNDVAINIGGATGHFELNVFKPVMIYNFLHSARLIGEGCVSFNDKCATG
                     IEPIADNIKKHVDNSLMLVTALNTKIGYYKAAEIAQKAHKEKTTLKEMAVKLGYVTPE
                     QFDEWVVPAKMVGDINS"
     gene            complement(12723..12887)
                     /locus_tag="VEV83_07985"
     CDS             complement(12723..12887)
                     /locus_tag="VEV83_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45092.1"
                     /translation="MFHFKFLAHIVMYDPFADPEVKRKQERQSCQEEQETGYVFTQGD
                     HHGTKIINLI"
     gene            12879..13262
                     /locus_tag="VEV83_07990"
     CDS             12879..13262
                     /locus_tag="VEV83_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45093.1"
                     /translation="MKHLVTVRVDASSVTWTKTGKEALVNGKMFDVNQFTAVNGQIEL
                     VGLFDEDEDILMSQLDSQEEDRFPANGNALVLKWFSCFSWVQQTDLNNLLLEESSSNI
                     ARHEKDVITDAFRACETPPPETASI"
     gene            13406..15424
                     /locus_tag="VEV83_07995"
     CDS             13406..15424
                     /locus_tag="VEV83_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45094.1"
                     /translation="MAVFVFVFIMTNAQTDSLMFAADTATLQGVVISGMIPARANETS
                     WNITRLTQQNMRASGAFNLSDALAKLPGVNQLTTGAGISKPVIRGLYGDRVLAIISGL
                     RFDNQQWQDEHGLGLNDMGIDRVEVIKGPSSLLYGSEAIGGALNIVEEMPAKPHTTVG
                     DLNVQLFSNTLGTFTDLGFKGAGSTQTWSVRAGINSQADYTDGNGDRILNTRFGGYYL
                     KGSYGFKSGNWTSTNHYVGSIDNYGFIMADNMEAKEPDGRWSRSMDGPHHTVCLNILS
                     SDNRISLQNSTLKLNVGGQSNLRMEDEGGGETSLKMLLSSGLYNLQWVKPLSAKTQFV
                     VGNNFLFQNNTNYGKRVIIPDANTVESGASVYVKNSSGKFILEAGTGFSLRNIVTEQT
                     PGVSSQGRGGSETPIQPFSKTYPVLNASTGAVANLNKNTFIKLNIGTGFRSGNLAELS
                     SNGLHEGTFRYEIGDPNLKVEYNINSEAEISFSKNNFSFSLTGFYNHFNNYIYLTSTG
                     EQYLGFEVYRYLQYDANLYGGEASMQVHISGPLKFSSDFSTVKGKLTNGTYLPFIPAD
                     KWHNAILVNFRDGKKLKQINCFIGSDICFTQNHPAQFEISTPGYNLLSAGASADLALG
                     GKAITVSVAGNNILNEYYYDHLSRFKGYGIHNIGRNLVLNVRIPFSLN"
     gene            15432..15863
                     /locus_tag="VEV83_08000"
     CDS             15432..15863
                     /locus_tag="VEV83_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45095.1"
                     /translation="MKIVFNKILLTCFFAAVLIGFFTACEKETDQMIPPILEFKTGAG
                     YTSDTAATVSVSTPIKVGIHAEKTEGEDYLHTFTVSHSYDGALPPVVDSMHVMEESER
                     DIYETDVNFIARDIPGTEVWYFTISNKDGLVVTKTITLTVE"
     gene            15959..16390
                     /locus_tag="VEV83_08005"
     CDS             15959..16390
                     /locus_tag="VEV83_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45096.1"
                     /translation="MHLLIFLAFTILELAIVIAIIAIILAIALPNLLSAPRASKCLEL
                     AAEIRKELEEAKDIATKMYNGDTTTTDEKPNHKLDSVTGKLKRLKEHCGEKDHSTIIS
                     QLNQLTAQLRLYISGDVPPEQNSIVQTFIDGFVDLAKKLAK"
     gene            16479..17828
                     /locus_tag="VEV83_08010"
     CDS             16479..17828
                     /locus_tag="VEV83_08010"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYK45097.1"
                     /translation="MSLQLPRRKKLHLVQLVAVIFLTVSGGPYGIEPLLTYAGHNGAL
                     LLLLITPLLWDIPTIFTVLELNGMMPVTGGYYQWVKKALGLRFAFYEGWWTWLYTFVD
                     LAIYPVLFVEYASFLFPQIEPYKIPICLVIVWGGALLNILGILKVGKASMILGVAVLT
                     PFLILFITATTHLNMHLNFSSLSLQGIPFSSLGLAIYTVMWNFIGWDNVMTYAEEVDK
                     PVKSYMKAAVIVFLIIFCVYFMSIFIAQSSGIDLAVLNDQGFPAVGSIVGGPWLGSLI
                     AAGGMASALGLFSAVLLSVSRVPQVMSDDKLLPAKLHKLHPKYKTPYISIIACAVVVS
                     GMILWTFADLLVIDLTLYGAGLFLEFVALIVLRIKLPNAHRPFKIKLNVFGLCLMTLI
                     PFSVYAIALAGALSEEGGSFKPALFAIGALISAEVIWQIIVWQRPHIKAVPVVIEEL"
     gene            17825..>18642
                     /locus_tag="VEV83_08015"
     CDS             17825..>18642
                     /locus_tag="VEV83_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HYK45098.1"
                     /translation="MKKLLISLSVLIFSLDGQAQQRPLPSPQQLKWSGMEFYLFVHFG
                     PNTFTDLEWGKGTEPEDVFNPTQLDCGQWCRIAKAAGAKGIIITAKHHDGFCLWPSKY
                     SAHTVAQSKWKDGKGDVLRELSDACKEYGLKMGVYLSPWDRNHPKYGTAEYNDVFVNM
                     MKEVVRNYGPFFEFWWDGANGEGPNGKKQVYDWHRFEQTMRSIAPNTVVFSDIGPDIR
                     WVGNEKGIAGDPNWNFLDTAGFTRGEGAPPTDTLNHGNVHGKNWIPAECDVSIRP"
BASE COUNT         5032 a         4189 c         4199 g         5222 t
ORIGIN      
        1 gcagcagcgc tcgcctggag aattccgatc ttgcgcagat cgatcacgtt aagcctgctg
       61 agaaagcggt cgagtattaa aagcgttcca aagtctttat ggtgcacaag gatctttaga
      121 ggattcgaaa catccatcga atagacgtcg ccgtattttt tcaaggaatt ggaaacagca
      181 atggagtcgc ctttggcatc aatttttttt acctggttat ttgtgttgat gagataaacg
      241 ttattgagat tatcgacata aaaatcggaa taggttcctt cgataaatgc tttttccttc
      301 acgtgcaacg ttgtgtcaac cgtgacaaat gttccatgcg ttcctgtgaa cagggcgaga
      361 agcaagatag tggttatgct tcccattttt ttaactcgac attgttacca tcaaaaactg
      421 catacgtgaa gcttgttatc cagtcgccga gatttatata gcggctgttg tcatttagct
      481 caatgttcat cggcaagtgg cgatggccga aaatgaaaaa atcaaaatgt tcttttgcaa
      541 gcatctcgcg cgaaaaaata ataagccatt cgctgtcctc accaagaaat actgaatctg
      601 cagcacccgt tttagccctg cttttcctgc tgaaataatt tgcgagcgac attccccagg
      661 taggatgcaa ttgtccgaat aaccattggc aaaatttatt tctaaatatc ttctttatga
      721 atttataccc gtgatcgccc ggaccgaggc catcaccgtg accgatgaaa aacttttttt
      781 tattccactc aaatgtcttt ggctgaaaga agaccggaat gtttaattcg ttttgaaaat
      841 agccgcgcat ccacatgtcg tggttgcctg caaaaagtat gatcggaatt ccgctgtctg
      901 ttatttctgc gagttttccg agcaggcgga caaaatgttt cggaacgacg gttttatatt
      961 cataccaaaa atcgaaaaca tcgccggcta ttattatttg ttgcgcatcg gcacgaatat
     1021 gctcaagaaa ggcgactatt tttcgttccc gcgaaagact ggatgaaaaa tctggtgcgc
     1081 cgagatgaaa atcggaaaga aagtaaattt tttttcccgg agcaacagtc atcgggtaaa
     1141 gatataaatc ggttacgggt ttggcccttc caccaaaaaa caaaatactt ctttcgggcc
     1201 atgcacgcca gtaaccaaag tcttttcaat gtcggcggta cggctgggac cagtcgcgaa
     1261 agttatcagt gaaggcagct tcccgttgta tttttttgta agcagatcaa gcccatcttt
     1321 gatatcatac acaagttgtt ttgtgtatgc gatgcagatg tgcactggtg cgtacacact
     1381 cacagttctg ccactctttt gcgcggagct catcgcaata ctgcccgtgc gtgcaactaa
     1441 gtattcgcac gatgttatgg cgcagtcgca accttcgagg tcatcggaga aatcaatttt
     1501 caagccgttg ctctttaaag tttctgcaac atcatcttcc ctaagaaaaa catttttcca
     1561 ttcccttgtt gtaaacaggg cttccaactg gcgaacgagc tctcgttcat ttgcacaaaa
     1621 agaaaatcgt ccctgtagcg aagtaaactt ctctgcgaac tcaatttccg gttccatggt
     1681 agaactcgta aacatatccg ggtgcgtttc tttttctgga aacggaacag gcactgggtt
     1741 tgccaatgcc tgttttattt tttttagaat attctttttt gcaacagatt ctttcatccg
     1801 ggaaatcagg tctttttcaa ttgtgagttc attgaaaact tatggagccg gtttcggagc
     1861 aggcatcgta atgctgctgt cgtaaggcgg cacgccggca cttatcgtgc cattgtcctg
     1921 gtggttttcg ccctcttctt cgccattttc ttgctcgtgc ttacggtcgt caaacgggcg
     1981 tttgccgatg agtgtttcca catcgctttg aaataggacc tcttttacga gcaattcttt
     2041 cgcaagtatt tcaacctgct tctttttttc gcgtaataaa gccttggtct tttgataggc
     2101 tgcatcaatc aacacccgca cttcttcgtc gatcattttt cctgtttctt cactatatgg
     2161 cttcgtaaaa gtgttatcct gtgtcggatc atagaaactt atattgccca ctttttcgtt
     2221 catcccatac accgtgatca tggcatacgc tgttttcgtt atttgctgca ggtcgtttga
     2281 ggcaccggtc gagatcttac caaagaaaat ttcttcagaa gcccttccgc ccaacgtcat
     2341 gcacaactga tccatcaact ggtctgtgtt atacaggtat tgttctttcg gcgtgtattg
     2401 cgcatagcct aatgcagccg taccacgcgg aacgatcgta acttttaaaa gcgggtaagc
     2461 atgctcaagg taccatccgc agatcgcatg accagcctca tgatacgcaa tgatctcttt
     2521 ttcttcaggc gatatgatct tgttcttttt ctcaagtcct ccaataaccc tgtcgatcgc
     2581 atcctggaaa tctgccatgt ccaccatttc ctttccttta cgggcagcga tgagggccgc
     2641 ttcgttgcaa acatttgcta tatccgctcc ggcgaaaccc ggcgtctgtt cagcgagttt
     2701 gtgtacgttg agcttttgag aaactttaat aggtttcaaa tgcactctaa aaatatcttc
     2761 tcttcctttc acatccgggc ggtcaatcga tatctgcctg tcgaaacgcc ccggtcgcaa
     2821 caacgcggtg tcaagtacat ccggacggtt agttgctgca agaattataa taccgctttc
     2881 gccgctgaaa ccatccattt caaccaggag ctgattcagg gtgttttctc tttcgtcgtt
     2941 gcttacgatc gcgttccttc cacgggcgcg gccaatcgca tctatctcgt ctataaaaat
     3001 tatacaagga gctttttccc ttgcttgctt gaacaagtcg cgcacacggc ttgcgccgac
     3061 acctacaaac aattccacga agtcggaacc actcatgctg aaaaaaggca cctgtgcttc
     3121 tcccgccatt gctttagcga gaagcgtttt accggttccc ggcgggccaa ttaacaaagc
     3181 tccttttggg atcttgccac caagtgcggt atattttttt ggattcttaa gaaaatctac
     3241 tatttccatc acctcgacct tagcttcatc gaggccggct acgtctgtaa aagtgatatt
     3301 caccttcgtg cctttatcaa acaattgtgc tcttgatttc ccgatattga aaattccgcc
     3361 cgggccgcca ctgcctccac caccgccaac ttttctcatc aacaagatcc ataagccgac
     3421 gaacaacaac acggtcacga tcgtgttggc aagtggacta aaccactgcc cttcatcgta
     3481 aacggtcgcc ggcacttcgt ccatgccgtg agttttataa aagtcatcca gttccctgtt
     3541 gaaactttcc cagttggtca ccttaaattc aaaaagcggc tttgtggcgg cgtcctttga
     3601 taagggttgt ttgaatttct cgtcctggtg ataatagggt ttgtcgaggc tatcagcttt
     3661 tatataaacc cgaacaagtt ctttattgcg tacctcatct attttcgcca cgtctccggg
     3721 cttgagcatt ttttccttga attcctgctc cgtgatagtt tggatatcgg cataccccag
     3781 attgaggaca ttatatgcga tgagaatgat cgcaacaaat gcgtagatcc aatatatgct
     3841 gaaacgagga ccgcggcgcg ggcccttatc attgccgcct ttctcgtaaa gatccggttt
     3901 cattttgttg ttttcctgtg ccatacattc taaatatcca tcttatatat aacgagatcg
     3961 atattgtttt gtttaaaagt tttttaatat tcctgcaaag gagcgtcgct ccacatctcc
     4021 tcaagtttat aaaatttccg tgcttcaggc tgcataacgt gaacgaccac atttatataa
     4081 tcgatcaaaa cccactgcaa agcctggtaa ccttcgtgcc ggtagggcaa ctcgcccaat
     4141 tgttttttta tagtgtcctc cacatgatct gcaatggccc tcacctggat attagtggtt
     4201 gcctggcaaa cgataaaata atcacttacg gcttcaggta tctttcgcag gtcgagcgaa
     4261 acgatctgct cgcccttctt ttcctgtatc gccttgataa ttaatttaaa aattctggaa
     4321 tttgcattga gccgcgtaat agtgttcttc tttcttgaag ctaaaacggt aagtggttcc
     4381 aaataagcaa ctattttttt atgtgaatga attttttgtt accgggcctg atcatgctat
     4441 tagcaaatgc tttgatgctg taagtgcgaa gcctatataa cctcttttgt aaaagattta
     4501 gtttcgccaa aattacatat tctttgcaag ccgcaccaac aaataacgtt ataggaaagc
     4561 cttttgttca gttgaacagc gttgacagca ccaacaacta tgccatggga cgggtacaaa
     4621 aagggcttgc aaagcatggc gaagcttact tcgcatggga gcaaacaaaa ggtaaaggac
     4681 agcgtgaaaa gcaatggcta tcagcaagag gagaaaatat tattttatca gtcgtgcttg
     4741 ataccagcgc tttttttctg cacaagcaat tttttctgag catggccgcg gcccttagtg
     4801 cgcgggattt atttaacaaa tacacaacga ataaagcgct cattaaatgg cccaatgata
     4861 tctattatgg tgacagaaag gcaggcggaa ttttaattga gaacgtcatt cacggtgatc
     4921 aatggcgttt cgcggtcgtt gggtttggcg tgaatatcaa tcaaacacta tttgatgcgt
     4981 cactaaaaaa cgcaacatct ctaaagcaag ttaccggcga gagttacgat gtggtgcgcc
     5041 tctccgaaga gctatgctcc atcatgcaac agaggtttct gcaattgcaa aacggagaac
     5101 agcaatcaat actggctgaa tataatagcg cattgtacag aaagcaggcg gtgacgaagt
     5161 tcaaagctcg ctcaagaatt ttcagcgcca ccgtaaacta tgtagacgaa aatggaagac
     5221 tgtttattgg aggggcggcc gaagaaagtt ttgagttcgg cgaagtagag tggctgcccg
     5281 actaaataaa ctcgactcca tccatcatca tatggttact ttcttttttg cgagcttctt
     5341 tttcaaactt gttgttgtta tatccgttga tcagacactg aaaaagatat gcagccaaaa
     5401 acgcgaaggt gcccagctgc ttgtactgtc gcacatgcac aacttcgtgg catacccagt
     5461 tcttattttt caaaaactcc tctttgctgc agttatgcag gtatatcgta cggcgcacag
     5521 ttacagccat gcgatcggtc ttcaatatcc gcgctgccag ccgggcaaga gctgaattcg
     5581 ttttgatgta aacattcata tcttaaattc gtcaaaatac gtattgaccg gtggagacat
     5641 gttccggttt agtttatctt caataatatg atatacgcat ttaaagaatt cattcctgtc
     5701 gttgatgcgt cgtctttcat tcacccgcaa tcctgcgtaa ccggcaacgt gtggatcgga
     5761 aaagatgttt atgttggacc cggcgcagct atacgcggcg attggggccg gataattatt
     5821 gaagacggat gtaacgtgca ggaaaattgc gtcatacata tgttcccggg tgtaacggtg
     5881 atgcttaaag aaaatgcgca tattggccac ggggctatca tacacggcgc aacgatcgga
     5941 aaaaattgcc tggtcggcat gaacagcgtg atcatggata atgttgaact tggagacgaa
     6001 agcattgtcg gcgcgctaag tttcgtgaaa gccggtaaaa agtttccggc cagaacattg
     6061 ctggcaggaa accctgctaa gatcatcagc caggtgagtg atgagatgat cgcctggaaa
     6121 tctgacggca cgaaattata ccaacaatta cccgtggaaa tgcacgcata ctggcgtcaa
     6181 tgtgagccac taagagcggg gccgaaagat caacccatcc aggagcgctc gtatcaaaca
     6241 tggaaagaaa caaaagatga ataagaggtt aaagcagtat tcgatactgg gtattatatt
     6301 ttgtgcgttc gcatcttgca gcgcacaaca aaattcagta gtgcaacagg tagatgcttt
     6361 gggcaggagc gaaacaattg aagattcggt tattcgacgg cttcgtgaca acaatgacct
     6421 ggtgattgct tacgcggttg aaaattttgc atgggtccgt tcagctaatt atctgatcat
     6481 cgcaaaaaat agtaatgaat ggaccggcta tcattattat gtaagcctga tgcataaccc
     6541 cggacaacca gctgcgcccg gtaatatcaa cccggctgag gtgaataaat tgtcgtgtga
     6601 ttccttactt gaatatatca gcaaaacgaa ggcgtggacc attaaaggcg actcgggcga
     6661 aaacttttgt ccaaactcga atcaaagttg caatatcaat gatgcctccg gcgcacggct
     6721 ctggatcata acaaaacagg gatcggtgaa cccatcatac tatgcgccgg aatttttcga
     6781 agaatgttgc cccggcaata aagaccgcgc tttattttta tcaatcgcaa aaaagatcga
     6841 gcaaatagtg tcggtggacg ctattagcaa ataagtttct tgctacgtga tacttcacag
     6901 aaaacggttg ccttaatgta cacaattgaa aatatcgcaa gtgttcttga cgctgaagcg
     6961 aggcttgtac aggccgacgc cgagatcatg caattggtga ccgacagccg ccgtattatt
     7021 tttcctgaaa caagtttatt ctttccgatc atcaccgaac acagggatgc gcatattttc
     7081 gtaccagaag tttatgaacg cggtgtaaga aatcttgtag tgcgaaaagg atttgatata
     7141 gcagccttcc cacacggtaa tttcattttc gtcgacgata cattaattgc ccttcagcat
     7201 ttaacggcct gccatcgcag aaaatttact tatcccgtga tcggcatcac aggcagtaat
     7261 ggaaagacga ttgtcaaaga atggttatat caattgctct cgccggattt caatattgtt
     7321 cgaagtccgc gcagctataa ttcgcagatc ggtgttcctc tgagcgtttg gcaaatgaac
     7381 gagcattacg acctggcaat tattgaagct ggtgtttcgg aaccggaaga aatgcagagg
     7441 cttgccgaga tcatacagcc ctctatcggc gtgctcacca acattggcaa cgcgcacgat
     7501 gaaaatttta cgtcgacaga acagaaggca caggaaaaag cattgctttt caaaagctgc
     7561 gaaacagtta ttttaaatgg agctgatccc gcaatcgtag atatcgtcaa aagtgagagc
     7621 aaggcaaaat tgttacgatg gggcaccgaa aacaacgatg acatttgtgt tgtatcgcag
     7681 caacgaaacg aaatcaacag cgtattaacc ctcgaacata gtggatctgt cttcacgatt
     7741 gaaatacctt ttacagacga tgcgtcgata caaaacgcga tcatttgtac ctccgtcttg
     7801 ttgtacttaa acgtgacgat agagctcatt caacagcgca tgcccttgct tcaatcgatc
     7861 gacatgcgac tccaattaat tccaggtata aacgaatgcg ccgtaataaa tgatagctac
     7921 agttttgata tcgcgtcgtt cgctgttgcg ctggatttta tgaaacagca aaaccagttc
     7981 ccggaaaaaa ccgttattct ttctgacatg cctggtgctg ataaccgcgg agcatatgca
     8041 gagatcattt ttatgctaaa ggcaagagac atcaggcgtg tgatggtaat aggcgagcac
     8101 tggaatacgt attatccgtt cttacaagac gcaattgctg atgtacaata ttttccatca
     8161 acggagtctt tcctatacca gttttccacg aatcatttcc gcaatgaact gatacttttg
     8221 aaaggtgcaa gaaaatttgg cttcgaaaat attgcctccg ttcttcaaca taaggtgcat
     8281 caaacggtga tggagattaa cctcacatca atgatccaca acctgaatgt atatcgaaag
     8341 atcctgaagc ccggcgttaa gatcatggcg atggtgaaag ccgccggcta tggcagcgga
     8401 agtgcagaga ttgcaaacgt gttacagttc cataaagtag actacctggc tgttgcctat
     8461 gccgacgaag gcgttgaatt gaggaaagcc aacatcaggt ctcccataat ggtgatgagt
     8521 acagatgaac aggcatttga atctgtgatc caatacaacc tcgaacctga gatctattcg
     8581 ctcaacatgt gcaggaaatt cgatcgttac ctcgataaac aagggctcct gcagtacccg
     8641 gtgcatatta agttggatac aggcatgcac aggcttggat tcgatatttc tgaattaaac
     8701 gatttgacgg atcttctgca tagcagtaac aggatggttg taaaatcagt atttagccac
     8761 ctggcggcgg gcgaggatcc ggaagaagat gagtttacat ccctgcaggc gcaactgttc
     8821 attcgaggtt gcctgcagct agaagaaagt ctcggttaca gtttcaccag gcacttatcg
     8881 aattcatctg caacacttcg aaaaaaagaa ctgcagtttg atatggtccg cctgggcata
     8941 ggtttgtatg gcatcgataa tacacacgca cggaagctgc agctgaagcc cgttgtgtcg
     9001 ttaaaaacga cgatcgctca attgcgaaaa ataaaaaagg gcgaaactgt cggatacaac
     9061 aggcttggaa gattgcacca tgatgcagtc atcgcaactt tgcggatcgg ttatgccgat
     9121 ggtttaaaac ggtgtttaag caacggggtt ggcaaaattt ccgtcaaagg aaaaactgcg
     9181 ccggttatag gttccgtcgc aatggacatg acaatggttg acgttacagg tattcgcgga
     9241 attcacgagg acgatgaagt tgaaatattt ggttctcaca ttccacttga agatgtggct
     9301 gcggcctgca atacgatctc ctatgaaatt cttaccggca tcagccagcg cgttaagagg
     9361 gtgtatgtag aagaataacg ttaacctatt cctcacatga tttaccctat ctttgcgcac
     9421 aaattttccg aaacaatcat cgagtagccc gtaagcaatt tgctggctct gcgtcatcat
     9481 caaatggttg ttcgatccca cctaattaag aaaataatta tttgttgaat gaaaggaaga
     9541 aacgttgctt ttataatcat tctgattctt gccgcagacc aggccctcaa attttatatt
     9601 aagacgcatt atacgcttgg cgaggaacat aacatgatgg gatcatggtt ccggctgcat
     9661 tttgtagaga acgaaggcat ggcatggggc ttgaagttcg gcggcggcct cggtaaaatt
     9721 cttttgacgc ttttccgttt ggtggctgtt attctcggaa cgttttatct ccacaccatc
     9781 gtaaagaaaa aatatcatcc cggcttcatc atttgtgcct cgctcattta tgcaggcgct
     9841 tttggaaacc ttatcgacag tatgttttat gggttgatct tcagcaacag caccccgttt
     9901 ggagtggcta cactatttcc acccgacggc ggttatgctt ctttctttca tggacaggtt
     9961 gtagacatgc tgtattttcc gatcattcaa acacattatc cttcatggtt ccctatcgct
    10021 agctggcgtg gccaggaatt tgaatttttc agccccgttt ttaatttggc cgatgcatcg
    10081 atctctgtcg gcgtcatcgt acttcttctt tggcaaaaga aattttttcc aaaaaaacat
    10141 cctgacaacc acccggtgga aacgcattcc gagatcaagg acgaaataag ggcggcttag
    10201 cctttcaatt ctggttaaat aaaaccagtt tgtttacggc aaggttgtat tgaatgcccc
    10261 atgcgtgatg tagaccgtac ttgaattgaa caccgcagtg ccactaaaat ttcccttaac
    10321 tactttggta gcatcatcgt agctggtgat atttactttt atgatctgcg gggtagtggc
    10381 gtcagcccgg taatagacga cggcacctgt ttgatcagac aaaccccatc ccgatgacgg
    10441 agatgcattt gtgagataag tgcccggtgc aacctggctg gaaggcatct gcacggaaag
    10501 aaagaaagta gtatcggcgg tcaccaaatt attagagcca agaagcgtta attgccagcc
    10561 ccagctatcc aaattgaata ttccgccagg gtcctggaac acaccggtgt aaaaagtatt
    10621 attcgtgctg tcggtaaatt tccatgttcc ggccgcggta ctatcgcctg tgtcaccacc
    10681 gccaccggtc cctgttgtat cgcctcctcc gcctaagccg gtgcccgtac tgtcctgcac
    10741 agtaacagca aaggagcaag tagaactgtc aaagcttaca ctgaatattg ttgcgacggg
    10801 aattatcggt gttccgatag gttttagttt aatgatgttg gtcccaatgg cgttgaaaaa
    10861 tcctgaatca acaaacttga aaccgttttg catgtctgtt gaaatactat aagagccggt
    10921 ttccgtaaca ttaacccgca agtcaatata acaagtgtca gcgccaggcg ttattccgtc
    10981 gtagtaagtg ccatgaaccg tgacaggcat gcaattaccg gtgctgtcct ttaatgttcc
    11041 ctttgcgctg tcgaggagac ccacttcgct acttaattcc ttttggcagg aagaacagag
    11101 cagcaagacg ctgcaggaga ccaggaggat tccggaaaaa atacttttca tagaaaatgt
    11161 ttcaccgctt gtttcaattt ctttataacg tgaacaggct ggataaattg cctgcatttg
    11221 ttctgcgata tcagctattt atgtctccaa ccattttcgc cggcaccacc cactcatcga
    11281 attgttccgg tgttacgtaa cccaatttta cggccatttc ttttaaagtg gtcttttctt
    11341 tatgcgcttt ttgtgcgatc tcagcagctt tatagtaacc aatctttgtg ttgagcgctg
    11401 taaccagcat caggctatta tctacgtgct tcttaatatt atccgctatt ggttcgatgc
    11461 cggtcgcgca tttatcatta aaggaaacgc atccttcgcc gatcagcctg gcgctatgta
    11521 agaaattata gatcatcacc ggtttgaata cattcaattc aaaatggcct gttgcgccgc
    11581 cgatattgat cgcaacatca ttgcccatca cttgtgccga gatcatcgtc agtgcttcgc
    11641 actgtgtcgg gttcaccttt cccggcataa tggaagagcc gggttcattg tccggaataa
    11701 agatctctcc aatgccactc cgcggtcccg acgaaagcat ccgtatatcg tttgcaattt
    11761 tcatgaggct gacggcgata gtcttcaaag cgccatgtgc ttccacgatc gcatcatgtg
    11821 aagcaagcga ttcaaatttg ttttcggcag taacgaacgg caatcctgtt aactctgcaa
    11881 tttttgttgc aacaagttcc gcatagccgt tgggtgtatt gatgccggtg ccgacggcgg
    11941 tgcccccaag cgccagctca cttaaatgtt gcagcgaatt ttttatcgct ctcaaaccat
    12001 ggtccagttg cgacacatag ccgctaaact cctggccgag cgttaatggt gttgcatcca
    12061 taaaatgtgt acggccgatc tttaccacgt gcataaatgc gcgactcttt tccttcagcg
    12121 tatcacgcag tttttcaatt cccggaattg tggtttcagc caccatctta tatgccgcta
    12181 tatgcattgc agtcggaaat gtatcattgc tcgattgcga tttatttaca tcatcgtttg
    12241 gatgcaagag tttttctttg tcagcgagcg cgccaccctt ttgaacatga gcacgataag
    12301 cgataacttc attcacattc atattgctct gcgtaccgct cccggtttgc caaacaacca
    12361 acggaaattg atcatcgagt ttgccggcaa ggatctcatc gcacacctgt gctatcgcat
    12421 cacgcttttc atcaggcaaa acgcccagtt cgttgtttgc aagagccgca gcctttttca
    12481 ggtacgcgaa cgctttaatg atgggagccg gcatcttatc tgtgtcttgt gcgatcttaa
    12541 aattttcaat gcttcgttgc gtttgtgcgc cccaatacac atcggaaggc actttcactt
    12601 cgcccatcgt gtctttttct atgcgatagt tcatataatg tcatttcgtg aaaccgcaca
    12661 aagttatgct tgtatgaaaa gactttttaa cctgaggcca accgtaccaa ttattttccc
    12721 aatcaaatta agtttattat tttagtgccg tgatggtcgc cttgcgtaaa tacataacct
    12781 gtttcctgct cctcctggca gctttgccgt tcctgttttc tttttacttc agggtcagcg
    12841 aaaggatcat acatcacgat atgcgcgagg aacttgaaat gaaacatctt gttaccgttc
    12901 gcgtcgatgc ttcttccgta acgtggacga aaaccggcaa agaggctttg gtcaatggca
    12961 agatgttcga cgtaaaccaa tttacagcgg tgaacggaca gatcgaattg gttggcttgt
    13021 ttgatgaaga cgaagatatc ctgatgtctc aattagacag ccaggaagaa gatcgctttc
    13081 cggccaacgg aaatgctctt gtattaaaat ggttcagttg cttttcgtgg gtgcagcaaa
    13141 ctgacttgaa taatttattg ttggaagaat catcttcgaa cattgcccgg catgaaaaag
    13201 atgtcatcac cgacgccttc cgggcctgcg agacaccccc tcccgagacc gcttccattt
    13261 aatttttata cagtagaact accgtatgaa ccggtagcct tcgcgcattt ctgaaaaaac
    13321 aagatcgcac aagtcacctg gataacaagg tcgcaagaac tccgaatctc tgatgggaga
    13381 catactgaaa ataagaatct tttttttggc tgtatttgtt ttcgtcttca tcatgacgaa
    13441 cgcacaaaca gattcattga tgtttgctgc agacactgca acactccagg gcgttgttat
    13501 ttcgggcatg ataccggcac gtgcaaatga gaccagttgg aacattactc gcctcaccca
    13561 acagaacatg cgtgcttcag gcgcctttaa cctgagcgac gccctggcga aattgcccgg
    13621 cgtaaatcaa ttaacgaccg gggccggtat ttccaaacct gttattcgcg ggctgtatgg
    13681 tgacagggtg cttgcaatta tctccggcct gcgtttcgat aaccagcaat ggcaggacga
    13741 acatggattg ggtttgaacg atatgggaat tgaccgtgta gaagttataa aaggcccttc
    13801 tagtttgtta tacggctccg aagccattgg cggcgctttg aatatagttg aagaaatgcc
    13861 ggcgaaacca cacacgactg ttggagatct gaatgtgcag ttattttcaa acacacttgg
    13921 cacttttact gacctcggtt ttaaaggcgc tggcagcaca caaacctgga gcgtacgggc
    13981 aggtattaac tcgcaggctg attacaccga cgggaatgga gaccggatat tgaatacgcg
    14041 ttttggcggt tactacctga aggggagtta cggattcaaa agcggaaact ggaccagcac
    14101 aaaccattac gttggttcga tcgacaatta tggttttatc atggccgaca acatggaagc
    14161 caaagaaccc gatggaagat ggagccgaag catggatggt ccgcaccata ccgtgtgcct
    14221 gaatattctt tcaagcgaca acaggatcag cctgcaaaac tcaacgttga agttgaatgt
    14281 gggcgggcag tcaaatttga gaatggagga tgaaggcggc ggcgagacga gtttaaaaat
    14341 gctgctcagt tcaggcctgt ataatttgca gtgggtaaaa ccgctctcgg cgaaaacgca
    14401 attcgttgtt ggaaataatt tcttgtttca gaataacacc aactacggca agcgtgtgat
    14461 cattcctgat gcaaacacgg tcgaatccgg tgcaagcgta tatgtaaaaa acagttccgg
    14521 caagttcatc cttgaagcag gaactggttt tagcttgaga aacattgtta cggaacagac
    14581 gcccggcgtt agctcccagg gtcggggagg atctgagaca cccattcaac cgttcagcaa
    14641 aacatatccg gtgctcaatg cgagtacagg ggccgttgct aacctaaata agaatacgtt
    14701 catcaagctg aacattggaa cgggtttcag aagtggcaat cttgccgagc tttcttcaaa
    14761 tggattacac gaaggaacat tccgctatga aattggcgac ccaaatttga aagtggagta
    14821 caacataaac tcggaagcag agattagctt tagcaaaaac aacttttcgt tttcgttgac
    14881 cggtttttac aatcatttca ataactatat ctacttaaca tcaaccggtg agcagtatct
    14941 cggctttgag gtgtacaggt atctgcagta cgatgcaaat ttgtatggag gggaggcaag
    15001 catgcaagtg cacataagcg ggccacttaa attttcaagc gacttttcta ctgtaaaggg
    15061 aaaacttaca aatggcacat acctgccatt catacctgcg gataaatggc acaatgctat
    15121 attggttaat ttcagggacg gcaaaaaatt gaagcaaata aattgcttca ttggaagcga
    15181 tatctgcttc acacaaaacc atcccgcaca gtttgagatc tcaacgcccg gttataattt
    15241 gttaagtgcg ggcgcaagtg ccgacctggc gttgggtggt aaagccatca ccgtcagcgt
    15301 tgccggaaac aatattttga atgagtatta ttatgatcat ctttcgcggt tcaagggata
    15361 cggcatacat aatattgggc gaaatctcgt cttaaatgtt cgcattccat tttcactaaa
    15421 ctaaaaacaa aatgaaaata gttttcaata aaattttatt aacctgcttt ttcgctgctg
    15481 ttttgatcgg ctttttcact gcatgtgaaa aagagaccga tcaaatgata ccccctatcc
    15541 ttgaattcaa aacgggtgcc ggttatacgt ctgataccgc cgctaccgtc tctgtcagca
    15601 ctccgatcaa ggttggaatt catgcggaaa aaactgaggg cgaagattat ctgcacacct
    15661 tcaccgtaag ccattcgtat gacggagcgc ttccgccggt agtggattcg atgcacgtta
    15721 tggaagagag cgagcgcgat atttatgaaa cggatgtcaa tttcattgcc cgcgatattc
    15781 cggggaccga agtctggtat ttcacgatca gcaacaagga cggcctggtt gtgacaaaaa
    15841 cgattacgtt aactgtagaa taaagatttt tttagtggga aatacagcct tgcagtgtct
    15901 actgcggggc ttttttattt ttcgaaatct gtatctttaa atttccaagg ccgattccat
    15961 gcacctgcta attttcctcg catttaccat ccttgaattg gcgatcgtaa tagcaattat
    16021 tgccatcatt cttgcaatag ctttgcctaa tctgctttcc gccccgcgcg cttcaaaatg
    16081 ccttgaactt gcggcagaga tcaggaaaga actcgaggaa gcaaaggata tcgctacaaa
    16141 aatgtataat ggggatacca cgacaacaga tgaaaaacca aatcataaac tcgatagcgt
    16201 tactggaaag ctaaaacgat taaaagagca ttgcggcgaa aaagatcatt ccactattat
    16261 atcgcagctc aaccagctca ctgcacaact tcggctatat atttcaggag atgttccacc
    16321 tgaacaaaac tcgatcgttc agacctttat tgatggcttt gtcgaccttg caaaaaaact
    16381 tgctaaataa gatttgtttt tccgcactgt tgtttcactt gataaaaaac atcgcaaaaa
    16441 acagctgcat aaatcgataa gagttatttt tatctaccat gtcgttgcaa ctgccgcgaa
    16501 gaaaaaaact gcatctcgtc cagcttgtgg ccgtgatatt tcttacggta tcgggcggcc
    16561 cttacggaat tgaaccctta ctcacatatg cgggccacaa tggcgccttg ttgttgctcc
    16621 taatcacccc tctgctttgg gatattccga ccatcttcac agtgcttgag ttaaacggca
    16681 tgatgcccgt taccgggggc tattatcaat gggtgaaaaa agcgctgggt ttgcgttttg
    16741 ctttttatga aggttggtgg acgtggttat acacgttcgt tgacctcgcg atatacccag
    16801 tgctgtttgt tgaatatgcg tcgttccttt ttccgcaaat agaaccgtat aaaattccga
    16861 tctgtcttgt cattgtttgg ggcggtgcgc tgttgaacat tctcggcata ttgaaagtag
    16921 gcaaagcgtc gatgatactt ggagtcgcag tgctaacacc ttttttgatc ttgtttataa
    16981 ccgcgacgac acacttaaac atgcacctca atttttcttc cctttcgctc cagggcattc
    17041 cattttcttc attgggcttg gccatctata cggtgatgtg gaattttatt ggatgggata
    17101 acgtgatgac gtacgctgaa gaagtggata aacccgtgaa gtcctacatg aaagcagcgg
    17161 tgatcgtatt cctcataatt ttttgcgtgt actttatgtc gatatttatt gcacagtcga
    17221 gtgggattga tcttgctgtt ttgaacgacc agggatttcc tgcagtgggt tcaatagtcg
    17281 gcgggccatg gcttggcagt ttgatcgcgg cgggtggcat ggcaagtgcg ttaggattat
    17341 tttctgcagt gcttctttcc gtttcgcgtg taccgcaagt tatgtcggac gataaattgt
    17401 tgccggcgaa attgcataag ctgcatccaa aatataagac gccctatata tcgatcatcg
    17461 catgcgctgt agtggtgagc ggaatgatat tgtggacctt tgctgatctt cttgtgatcg
    17521 atctcacact ctatggcgcc ggattatttt tagaattcgt tgcgctgatc gtcttgcgga
    17581 tcaaattgcc gaatgcacac cggccgttca aaataaagct taacgtattt ggcctttgtt
    17641 tgatgacgct gatccctttt agcgtatatg cgatagcgct cgccggcgct ttgtcggaag
    17701 aagggggcag cttcaaacct gcactgtttg cgataggggc tttgataagt gcagaagtaa
    17761 tttggcaaat catcgtttgg caaagaccgc acatcaaagc tgttccggtc gttattgaag
    17821 aattatgaaa aagctgctca tttcactctc ggttcttatt ttttccctcg acgggcaagc
    17881 gcaacagcga ccgcttccat ctccgcaaca attaaaatgg agtggaatgg aattttacct
    17941 gtttgtgcac ttcggcccaa acacatttac cgacctcgag tggggaaaag gaacggagcc
    18001 cgaagacgta ttcaatccaa cacaactcga ctgcgggcaa tggtgccgca ttgcaaaggc
    18061 tgccggtgcg aaaggaatta tcatcaccgc aaaacatcat gacgggtttt gtttgtggcc
    18121 gagcaaatat tcggcgcata ccgttgctca aagcaaatgg aaagatggca aaggcgacgt
    18181 gttacgcgaa ttaagcgacg catgtaaaga atatggattg aagatgggcg tttatctatc
    18241 gccgtgggac agaaatcatc cgaaatatgg aacggcggaa tacaatgacg tttttgtaaa
    18301 catgatgaag gaagtcgtaa ggaactacgg accgttcttc gaattctggt gggatggagc
    18361 aaacggtgaa ggtccgaatg ggaaaaaaca ggtttatgat tggcatcgtt ttgaacaaac
    18421 gatgagaagc atcgcgccaa acactgttgt cttcagcgat attggtcctg atatacgatg
    18481 ggttggaaat gaaaaaggaa ttgcgggtga tccgaattgg aattttctcg acacagcagg
    18541 atttacaaga ggcgaaggcg ctcccccgac agacacatta aaccatggaa atgtgcatgg
    18601 aaaaaattgg atacctgctg aatgcgatgt aagcatcagg cc
//
LOCUS       DASQJI010000288         9024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_953182,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000288 DASQJI010000000
VERSION     DASQJI010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9024
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953182"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2363)
                     /locus_tag="VEV83_08020"
     CDS             complement(<1..2363)
                     /locus_tag="VEV83_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45099.1"
                     /translation="MNYLRCAILFTFLVLTSKNIFAQEKFTLRGYVKDSLSGETLIGA
                     SIVIKDETRGVTTNQYGYFSLTLSRGNYQLLFSYVGYIPKIVDVDFTENSSQDILLAP
                     VSSSIREVVVTAQKRLNNVKSAQMGQIDMSINTVKSIPSFLGETDILKTLQLLPGVRN
                     SGEGNAGFYVRGGGPDQNLILLDEAVVYNTGHLFGFFSVFNSDAVKNLTLIKGGMPPQ
                     YGGRLSSVIDIAMKEGNVNKTEVDAGIGLIASRISLQGPIVKNKASYIISARRTYLDL
                     LIKPFISKNSAYYGSGYYFYDINAKMNYQVSANDHLYLSGYFGRDKFDFNNNRRSFST
                     SIPWGNSTATFRWNHSYSRKLFSNVSLIYNDYKFSFVGSQDDFNLTLSSGIKDWNTKI
                     DFDYFASTSHKIKFGAQYTYHTFYPSVVSGSQDSVVFHPANIQKKYANEFGVYVQDDW
                     DISKHIRINYGVRYSLFQQVGPYTEYVTDADGNKLDSTSFGRGRSVKTYGGFEPRFTF
                     RYSFNNNSSLKASVTRNLQYIHLVSNAGTTLPTDIWVPSTYRVMPQDGWLYAAGYFKN
                     FSNNMFETSLELYYKTMQHQIEYKEGYTPSLSDPEESFVFGKGWSYGSELFINKVKGK
                     LTGWVGYTLSWTWRKFPGLNDGNIYPGKYDRRHDLAVVGIYELSPKWKVSSTFVFGTG
                     NAISLPERFYFIEGTLTQEYSTINAYRMKPYNRLDIAATYTPVHKKHRKFSDSWVFSI
                     YNVYSRQNPYFYYFDQEGDVANGTLKVTAKQVSLFPIIPSVTWNVHF"
     gene            complement(2360..2959)
                     /locus_tag="VEV83_08025"
     CDS             complement(2360..2959)
                     /locus_tag="VEV83_08025"
                     /inference="COORDINATES: protein motif:HMM:NF023255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3347 domain-containing protein"
                     /protein_id="HYK45100.1"
                     /translation="MKIKASTIIAVSFLFALYSCGNKKEQSKSQPAVISKSKNSDSFN
                     LAFDSVLLAYNSLKDAFINWDTASVNRSAQALQYAVISVPYTELHDDANATKATSIAQ
                     NTADGLQTLLNVDSIGDKRRFFYTVSESVYKLIEAVNYDKAVIYHKKCPMAFNGDREG
                     WWISETRKMDNPYFGNKHPKYKNAMLECGTVEDSINNMQ"
     gene            complement(3085..4761)
                     /locus_tag="VEV83_08030"
     CDS             complement(3085..4761)
                     /locus_tag="VEV83_08030"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45101.1"
                     /translation="MQNKFPLLKLFFFSFIATVVCSHVQAQLPIKKVTKNISTNTTWH
                     ASNIYFLKSKIYVTNGATLTIEPGTVIQGDTSKKGCLIITRGAKLQAVGTPCNPIVFT
                     SSRGPGKRKRGDWGGVIILGYAQINQPGDTAHIEGIDPIPETLFGGGKNPNCGGGDCP
                     DNNDNSGTLQYVRIEFAGVPLAPNNEINGLTMGGVGRGTTIDHIQVSFSNDDSYEWFG
                     GTVNTKYLIAFRGLDDDFDTDNGHSGKHQFLFGLRDPNVADISGSNGFESDNDAGGSL
                     NTPQTSAVFSNVTIDAGGDTTNNVNFRRGAHIRRNSHEYVYNSVLMGYPVGVLIDGTT
                     TESNVLADTLFASNIVAATQSANWITTTPVDGSVDDLLRNHADNQFYTGNSGVKLSAP
                     YTLGNPKPWPQSASPAVGSANFHHSPLADAWFTPVTYRGAFAVGATHSWMTTWSNFTP
                     VNTDYSNGSNQCLQPLTVVEQPVANITTADALISPNPNKGSFNLQLNGFNTNSVNLKV
                     ADLNNGKVYFIGKVANNSTTRINVQVPNGNYVIEMTDGKNTISRKITILN"
     gene            4940..7768
                     /locus_tag="VEV83_08035"
     CDS             4940..7768
                     /locus_tag="VEV83_08035"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45102.1"
                     /translation="MQARSLLITTFFFLSTYSYSQTGILTGKITDASNNQQLVGATVS
                     IKDHHLKTVSDVDGVYRLGNLSDGKYSLEITYVGYTTKQVSEAEIRKGQVTTLNIALD
                     AANNNLKTVVVVTTQASRESINSILNTRKNAAVVSDAISADMIKRSPDKNVSDILKRV
                     SGTSIQENKFVIVRGMSDRYNEAMLNGCLLPSTEADRKTFAFDIFPSDIIDNITVIKS
                     ASAEYPGSFSGGLINVNLKEVPDKNFISVKTGVGYNTITTGKEFTRQPSGGLDFLGLD
                     NGTRALPANFPSSEEYNALAPGKQNEWAQQLKNDWALNRDPSAPLNSKLELSGAFTHV
                     GNKGYPRIGALFAVSYNSTYKTSHFDNNYYGTPRTIHDSISKGDTYYEYKDTLNSRNI
                     LSSALANFTIKVSPNSKFFFNNLLAINSYIQTTTRGGLSEAGTGVLSPYVAYVHYFQS
                     NALYNGQFGGEHYLSKYKLRIKWTTYLTELHRNEPDMRQMIYYTPFEGAPMFAYLGYP
                     TTASTTVGGLRMYYDTKDETKGINVDLNKAFNFLSNPQTFKFGFASFWDTRRHDGRFL
                     RNDPTTGNFDQSIYFLPPAQIFDQKNFDPQTGLVLTDFGERQWYFYYGDQKSLAGYAM
                     FDNKLTSKLRLSWGLRVEDYSNTVHSFKEAKEKYVVDTSFLDYLPSANLIYSILPKAN
                     IRLSYSKTVARPLYRELAATQFYDFNLNATLFGTNLLETKVDNYEIRWEQYFPNAQYY
                     SLSTFYKKFQHPIEQKIITAGADSKTITWQNAPTAEDLGVELEARKNLDFIHPSLGNF
                     YLYGNAALITSTAFVAGNGSDTANRPLQGQSPYVVNASLQYSDARSGITASALYNIIG
                     ERIFLVGGLDEQYIWEKPHAQLDFKVSKTFAKNGIVELSFSDLLHQKDIWFWDLNSNK
                     KYDAGYPDVLIQSRSFGTTATLSIGYRF"
     gene            complement(7959..8375)
                     /locus_tag="VEV83_08040"
     CDS             complement(7959..8375)
                     /locus_tag="VEV83_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45103.1"
                     /translation="MRAAFIFLVVVSIASCRQKFDSKSYEENKQSLADREKQHPEQFL
                     RISSDDKKNLLGVTVIKGRLVNTASVCCYKNTRVKMLCYKNGVRVEEHEDVIAEVIKP
                     GNVKNFRTRYHLPKGTDSLALSVMSADVISDSLATN"
     gene            complement(8506..>9024)
                     /locus_tag="VEV83_08045"
     CDS             complement(8506..>9024)
                     /locus_tag="VEV83_08045"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HYK45104.1"
                     /translation="EFDEGGRMAASGHIETQLLNELNDLDYYKQPYPKSLSNDLGTDV
                     VHPLIKSFNLAPQDALRTYTEHIAFQVGRSIVDLIEENNIKHQTSNVKLLVTGGGAFN
                     DFLMHQLGEVVRPMNVEIVIPDVEVVKYKEALVMALLGVLRWREENTVMASVTGAKRS
                     SIGGAVWIGQEA"
BASE COUNT         2558 a         2041 c         1877 g         2548 t
ORIGIN      
        1 tagaaatgca cattccaggt aacggatgga ataattggaa acagcgacac ttgttttgct
       61 gtcaccttca gcgtaccgtt ggcgacatcg ccttcctggt cgaagtaata gaaatacgga
      121 ttttggcggc tgtacacatt ataaatgctg aatacccaac tatctgaaaa tttgcggtgc
      181 tttttatgaa ccggcgtata ggttgccgca atatcaaggc ggttataagg tttcatgcga
      241 tatgcgttga tcgtactgta ctcctgcgta agtgtgcctt caataaaata aaaacgctcc
      301 ggtaatgaga tggcgttacc ggtaccaaaa acaaaagtcg acgagacttt ccatttcggc
      361 gacaattcat aaatgcctac aactgcgaga tcatgacggc ggtcgtattt gccaggataa
      421 atattgccat cgttaagacc gggaaatttt ctccatgtcc aggacaatgt gtaaccaacc
      481 cagccggtta attttccttt taccttgtta ataaaaagct cacttccata actccatcct
      541 tttccaaaaa caaaactctc ttcaggatca ctgagtgatg gcgtgtatcc ctctttgtat
      601 tcgatctggt gttgcatcgt tttataatat aattcaagcg atgtttcaaa catattgttt
      661 gaaaaatttt tgaagtaccc agcggcgtac aaccaaccat cctgcggcat cacgcgatac
      721 gtggacggca cccaaatatc agtcggcaac gtagtgcccg cgttactcac gagatgtatg
      781 tactgaagat tccgcgttac agatgctttc agcgaactgt tattattaaa agaatagcgg
      841 aatgtaaatc gcggttcaaa accaccatat gtttttacac tgcgacctct gccaaacgaa
      901 gtgctgtcga gcttattgcc atccgcgtct gtcacatatt ctgtataagg gccaacctgc
      961 tgaaacaggc tgtaccgaac tccataattt attcttatat gtttactgat gtcccagtca
     1021 tcctgcacat aaaccccaaa ttcgttagcg tatttttttt gaatgttggc cgggtgaaag
     1081 acaaccgagt cctggcttcc gcttacgacg ctcggataaa aagtatgata ggtgtattgg
     1141 gcgccaaatt ttattttatg cgatgtagat gcgaaataat caaaatcgat ctttgtattc
     1201 cagtccttga tccccgatga caatgtaaga ttgaaatcat cctgcgatcc aacaaaagaa
     1261 aacttataat cgttgtaaat aagggaaaca ttagaaaata atttgcggct atagctatga
     1321 ttccatctga acgttgccgt agaattcccc cagggaatac ttgtactgaa tgaacgccgg
     1381 ttattattga agtcaaattt atccctaccg aaataaccgc tgagataaag atggtcattt
     1441 gcggaaacct ggtagttcat tttcgcattg atatcgtaga aataataacc tgagccatag
     1501 tatgcactgt tttttgatat gaacggcttt atcaaaagat ccaggtatgt acgccgcgcc
     1561 gagattatat acgatgcttt attttttacg atcggcccct gcagcgaaat ccttgatgcg
     1621 atcaaaccaa ttcctgcatc cacttccgtt ttgtttacgt ttccttcttt catcgctata
     1681 tcgatcaccg atgacagacg accgccatat tgaggaggca tcccgccttt gatcagcgta
     1741 agatttttta ccgcgtcgga gttaaacacg gaaaagaagc caaacaaatg gccggtatta
     1801 tatacgacgg cttcatccag caggatcaaa ttttggtcgg gacctcctcc ccggacataa
     1861 aacccggcat tgccttcacc ggaattgcgc acaccaggaa gaagttgcag cgtttttaaa
     1921 atatccgttt caccaagaaa cgatggtatc gactttacgg tgttaatgct catatcgatc
     1981 tgtcccattt gcgcactctt cacattgttc aaacgttttt gcgccgtaac aaccacttcc
     2041 cttatgctag acgacaccgg tgcgagtaaa atatcctgcg acgaattttc agtaaaatcg
     2101 acgtcaacga tctttggtat gtaaccgaca taagaaaaaa gaagctggta gtttccacgc
     2161 gaaagcgtta aagaaaaata tccatactga ttggtggtaa caccccttgt ctcatctttt
     2221 ataacgatgc tcgcgcctat gagtgtttcg ccgctcaatg aatcttttac atagcccctc
     2281 aacgtgaatt tttcctgggc gaaaatattt ttcgaggtta gcacaagaaa agtaaaaagg
     2341 atcgcacagc gcaaatagtt cattgcatat tattgatcga atcctcaacg gttccgcact
     2401 ccagcatcgc gtttttgtat ttagggtgtt tattaccgaa ataaggattg tccatctttc
     2461 ttgtttctga aatccaccac ccttcgcggt cgccgttaaa agccatcggg cattttttat
     2521 gatagatcac ggccttatca taattcacgg cttcgatgag cttataaacg ctttccgata
     2581 ccgtgtagaa aaaccggcgc ttgtcgccta tggaatctac atttagtaaa gtttgtaatc
     2641 cgtccgcagt attttgggca atgctcgttg cctttgttgc atttgcatca tcgtgcagtt
     2701 cagtataagg aacgctgatc acagcatact gcagcgcctg cgccgatctg tttacggaag
     2761 cggtatccca attaatgaaa gcgtctttca gcgaattgta tgcaagcaaa acactgtcaa
     2821 atgcgaggtt gaagctgtca gaatttttgc tcttcgatat gacagcaggt tgtgatttac
     2881 tttgttcttt tttatttccg catgagtaca gcgcaaacaa aaaagacaca gcaattatcg
     2941 tcgacgcttt tattttcatc aagaacgttt gccgcaaatt tagctgtaaa caatttgccg
     3001 cgtctattcc ctcgaggttt aacaaataaa aaaggggcac atgaaaatgc accccgatat
     3061 gtaattaaac atatgcaaaa tcggctagtt aagaatagtg atcttccgtg agatcgtatt
     3121 ctttccgtca gtcatttcta ttacatagtt gccatttgga acttgcacat taattcttgt
     3181 cgtgctgtta ttggcgactt taccgataaa ataaactttg ccgttattta gatcagccac
     3241 ttttaagttc accgaatttg tattgaagcc attcaattgg aggttaaagc ttcccttgtt
     3301 aggattcggg ctaataaggg catcagcagt ggttatgttt gcaaccggtt gttccaccac
     3361 tgttaaaggt tgcaggcatt ggtttgagcc attgctgtag tctgtgttca cgggagtaaa
     3421 atttgaccag gtggtcatcc aactgtgagt agcacccacc gcaaatgcgc cccggtacgt
     3481 aacaggtgtg aaccatgcat ctgctaaagg cgaatggtga aaattcgccg atcctaccgc
     3541 aggcgatgca gactgtggcc atggttttgg attacctaag gtgtacggtg cggagagctt
     3601 gacgcccgaa ttgcctgtgt agaattgatt atcggcgtga tttctcaata ggtcatcaac
     3661 ggagccatca acgggagttg tagtgatcca gttcgcggat tgtgttgcag cgacaatgtt
     3721 gctggcaaac agtgtgtcgg ccaaaacatt actttcagtt gttgtaccat cgatcagtac
     3781 accaaccggg tatcccatca aaacagaatt gtaaacatat tcatgcgagt tacggcgaat
     3841 atgtgcaccg cgcctgaagt ttacattgtt ggtagtatcg ccgccagcgt caatagttac
     3901 gttgctaaat actgcgctgg tctgcggcgt attcaatgaa ccgccggcat cattgtcaga
     3961 ttcaaaccca tttgagccgg agatgtcagc aacattcggg tcacgcaatc caaacaagaa
     4021 ttggtgctta ccagaatgtc cattgtctgt atcaaaatca tcatctaaac ctctgaatgc
     4081 aataagatac tttgtattca cagtgcctcc gaaccattcg taagaatcgt cattgctgaa
     4141 gctaacctgg atgtgatcaa tcgtagtgcc tcttccaact ccacccatcg ttaagccgtt
     4201 gatctcattg tttggggcaa gcggaacgcc agcaaactct atccgcacat actgcaacgt
     4261 tcctgaattg tcgttgttgt ccggacagtc accgccaccg cagttagggt tcttcccacc
     4321 gccgaataac gtttcaggga tcggatcgat accttcgata tgcgccgtat cccccggttg
     4381 atttatttgg gcgtaaccta atatgatcac tccaccccaa tcaccccgtt ttcttttccc
     4441 cggtcctctt gacgacgtaa atacaattgg attgcacggt gttccaacag cctggagttt
     4501 tgcgccacgc gttatgatga ggcaaccttt ctttgatgta tctccctgga tcaccgttcc
     4561 gggttctatt gtcagcgttg caccgttcgt tacatagatc ttgcttttca aaaagtaaat
     4621 gttgctcgca tgccacgttg tgttcgtaga aatgttcttg gttacttttt taataggcaa
     4681 ctgtgcttgc acatggctgc aaaccacagt agcaataaat gaaaagaaaa aaagttttaa
     4741 gagcggaaat ttgttttgca taaaggaaaa ttttcgccaa aagtagccgc acaccttgca
     4801 gaaaaaggga aactaaacgt tatggaattt taaccaaatt gttatggcat tgtgatgtcg
     4861 cggtaacaat tcggtaacga tttgataatc gcgcgctgat cgattacggg aagtcgcttc
     4921 tgttactttg caaacaaaaa tgcaagcaag atctttactg ataactacat tttttttctt
     4981 atcaacctac tcctactcgc agaccggcat cctcacggga aaaattactg atgcgtccaa
     5041 taaccaacag cttgttggtg caaccgtgtc gataaaagat catcacctta aaactgtgag
     5101 tgatgttgat ggtgtgtacc ggctcggaaa tctctctgac ggaaaatatt cactcgagat
     5161 cacttatgtc ggctacacaa caaaacaggt aagtgaggca gaaataagaa aaggccaggt
     5221 caccacgctc aacatcgcgt tagatgctgc aaacaataac ctcaaaacgg tggtggttgt
     5281 aaccacgcag gcatcaaggg aaagtattaa ttcgattcta aacacgcgca aaaatgctgc
     5341 tgtggtctca gacgccataa gcgcagatat gatcaaacga tcgcccgaca aaaatgtgag
     5401 tgatatattg aaaagggtta gcggcacgag catccaggaa aataagtttg ttatcgtaag
     5461 agggatgagc gacaggtata acgaggcgat gcttaatggt tgcctgctac ccagcactga
     5521 agctgatcgc aagacgtttg cgtttgatat ttttccttcc gatatcatcg acaatatcac
     5581 cgttatcaaa agcgcttccg cagaatatcc gggcagtttt tcgggtgggc tgataaatgt
     5641 gaacttgaaa gaagttccgg ataagaattt tatttccgtg aaaaccggcg tgggctataa
     5701 caccataaca acgggaaagg aattcacccg gcagcccagc ggagggctgg attttttagg
     5761 actagataat ggcacgcggg cattgccggc taattttccg tcaagtgaag agtataacgc
     5821 gctagcaccg ggtaaacaaa atgaatgggc gcaacagtta aaaaatgatt gggcattaaa
     5881 cagagacccg tcggcgccat taaacagcaa actggaattg tcaggcgctt ttacccatgt
     5941 cggcaacaaa ggctatccca gaattggtgc attgttcgcg gtgagttata attccactta
     6001 taagacttct catttcgaca ataattacta cggcactccc cggacgatac acgattcaat
     6061 ctctaagggc gatacttatt atgaatacaa agacacacta aactcgcgca atatactatc
     6121 gagtgccctg gccaacttta cgatcaaagt aagtccgaat agtaagttct tttttaataa
     6181 cctgctcgcc attaattctt atatacaaac caccacacgc ggaggcctga gtgaggcagg
     6241 cacaggagtt ttatcccctt acgttgccta cgtgcattat tttcaaagca acgccctata
     6301 taatggacaa ttcggaggtg aacattattt gtcgaaatat aaacttcgca ttaagtggac
     6361 cacatatttg accgaattgc acaggaacga acccgacatg cggcaaatga tctattacac
     6421 accttttgag ggcgcgccca tgtttgccta tctcggttat ccaacaaccg cgtcaaccac
     6481 cgtgggcggc ctgcgaatgt attatgacac gaaggatgaa acgaaaggca tcaatgttga
     6541 cctgaataag gcatttaatt ttttgagcaa tccgcaaacg ttcaaatttg ggtttgcgag
     6601 tttttgggat actcgcaggc acgacggccg tttcttaaga aatgacccaa ctaccgggaa
     6661 tttcgatcaa tcaatttatt tcctgccgcc agctcaaata tttgatcaga aaaatttcga
     6721 tccgcaaaca ggcctggtat taaccgactt tggcgaaagg caatggtatt tttattacgg
     6781 cgatcaaaaa agcttagcgg gctatgcgat gtttgataac aagctcacta gcaaattgcg
     6841 cttatcgtgg gggcttcggg tggaagatta ctcaaacact gttcacagtt ttaaagaagc
     6901 aaaagaaaaa tatgttgtgg atacaagctt cctcgattac ctgccttctg cgaatctgat
     6961 ctattccatc cttccaaaag caaacatcag gttgagctac agcaaaactg tcgcaaggcc
     7021 tttgtaccgt gaactggccg caactcagtt ctacgatttc aatttgaatg cgacgctttt
     7081 tggaacgaat cttctggaga cgaaagtcga caactatgag atccgttggg aacagtactt
     7141 tccgaatgcg caatactatt ctttgagtac gttctataaa aaatttcagc acccgataga
     7201 gcaaaagata attaccgccg gcgcagacag caaaacgatc acctggcaaa atgcccccac
     7261 tgccgaagac ctgggcgtgg aacttgaagc acgtaaaaac ctcgacttca ttcacccgtc
     7321 actgggcaat ttctacctgt atggcaatgc tgccttaatt acatccactg cgtttgtcgc
     7381 cggaaatgga agcgacacag caaaccgtcc cttacaaggt cagtcgccgt atgttgttaa
     7441 tgcttcgcta caatacagtg atgcaagatc aggcataaca gcgtctgcgt tgtataacat
     7501 tatcggcgaa cgtatttttt tggtaggagg actagatgaa caatatatct gggaaaagcc
     7561 acatgcccaa cttgatttta aggttagcaa gacctttgca aagaacggta ttgttgaact
     7621 ttcgttttcg gacctgctac accaaaaaga tatttggttt tgggatttga attcaaataa
     7681 aaaatatgat gccggttacc cggatgtttt gatacagtca agatcgttcg gaacaacagc
     7741 tactttaagt attggttaca ggttttaaca gcattccttt gtttgaaccg cgctgcggcg
     7801 cggttttttt gttggcttgt ttataaaaaa ttttctactt cgataactcg tgacaataag
     7861 cagcaaatca caaaacacaa gttccaaaga aatgcaaatt aaaaattcaa aaaggcgatt
     7921 gagtacctgt ggtcgttaac gaatgatccg gagatgtgtt agttcgttgc caggctatcg
     7981 cttatcacgt cggcgctcat caccgataga gcgaggctat cggttccttt tggcaagtga
     8041 tatcttgtgc ggaaattttt cacattgccc ggcttgatca cttcggcgat cacatcctcg
     8101 tgctcttcca cccgaacgcc gtttttgtaa caaagcatct tcaccctggt gtttttgtag
     8161 cagcataccg aagcggtatt taccaacctg ccttttatga ccgtcacgcc aagcaaattt
     8221 ttcttatcgt cagatgatat tcttaagaat tgctcggggt gttgcttttc cctgtcggca
     8281 aggctttgct tattttcttc ataacttttt gaatcaaatt tttgcctaca tgacgcgatc
     8341 gaaacaacaa ccagaaaaat aaatgcagct ctcataaaca agatttgata tttcaaaata
     8401 ataacgaacc gcaaccgtct ttattttttt ctgtttgttt gagaattgtg aaagcagaac
     8461 ctgaaacttc aaacttcaga cttcaaactt caaacctcaa acatattaag cctcctgccc
     8521 tatccaaaca gctcccccaa tgctgcttcg ttttgccccg gtaactgaag ccataactgt
     8581 attttcttcc cgccaccgca gaactcccaa caatgccatt accaacgctt ctttatattt
     8641 tacaacctca acgtccggaa tcactatctc cacattcatt ggccgtacaa cttcccctaa
     8701 ttgatgcata agaaaatcat taaaagcacc tccgcctgtt accaaaagtt tgacgtttga
     8761 tgtttgatgt ttgatgttat tttcttcgat cagatctaca attgaccgtc caacctgaaa
     8821 agcgatgtgt tctgtgtaag ttctcaatgc gtcctgaggc gccaggttaa atgacttgat
     8881 caacggatgt accacatcag ttccaagatc gttcgaaaga gatttgggat atggctgctt
     8941 ataataatca aggtcattca gttcattcag cagttgggtt tcaatgtgac cactagccgc
     9001 catccgccca ccttcatcaa attc
//
LOCUS       DASQJI010000289         6843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1259661,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000289 DASQJI010000000
VERSION     DASQJI010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6843
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259661"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VEV83_08050"
     CDS             <1..499
                     /locus_tag="VEV83_08050"
                     /inference="COORDINATES: protein motif:HMM:NF019237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1566 domain-containing protein"
                     /protein_id="HYK45105.1"
                     /translation="SRTPQSANNSVAAHYIGQHYGGGIIFFIDSTEQHGLIADTADLP
                     KRAPWDPNNVYTTTGAIKKSIGNGYLNTQQIVSALGDSGRYAAFKCWNYKRHGYRDWF
                     LPSKNELNELFKQRNVVGGFASFFYWSSTEIDNSDAWDVDFFDGSNGYGGKGNAFSVR
                     AIRAF"
     gene            519..1001
                     /locus_tag="VEV83_08055"
     CDS             519..1001
                     /locus_tag="VEV83_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45106.1"
                     /translation="MTPKASSRTYFQAHSKAQRDQPGVQKGTELKVLNRLAGLIIFIF
                     LLSGCTKYIDSITTWKNGEEICFLINISGLPTGATDSITISLVAGDTKQGTFRGGNGY
                     HKICIAVPGGMPAPTTHITALVKETSSNGKSGQTEAIDKQLKSIDTTAPAIPTGTTVH
                     "
     gene            2665..4812
                     /locus_tag="VEV83_08060"
     CDS             2665..4812
                     /locus_tag="VEV83_08060"
                     /inference="COORDINATES: protein motif:HMM:TIGR04534.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELWxxDGT repeat protein"
                     /protein_id="HYK45107.1"
                     /translation="MRVFTILIFLVHIQPAASAQCDYLTSFGSDINGGISTTVSAGGK
                     LFFSSYDTLHGRELWVTDGTTAGTHLVKDINPGIANSVPFYFQYFAYDFKGVLFFQAD
                     NGVTGPALWRSDGTKAGTWLVADLYIDNSAHSLTNFASTDSVLYFTADGKTLWRSNGT
                     AAGTHPLAYFNVARELTTFKNNLYFSADANNAGEELWKSNGATGNTALLKDINGVYGT
                     SLPNHLHATDNALYFMATTNAGCELWKTTGSSATTQMVKDINPGNADGVIGFYWYGDM
                     SHIGNTLFFSANDGVNGLQAWKSDGTDAGTVSISTLAPGVSQYCNYPVVNGKVFYYSN
                     EDGSNYVQYDPVMNASSVTGYPFYYYYPQTFLGSWLFYAGQDSVYGPEIWQSAGTPSS
                     TRRIQEIRLVDNFYNKYLSGPNRIAGTAGSKLIFTVGRDPFNTGTSLYSYDTALALTN
                     AFAPSVLIPVTLSSKKMHLVWNRIEVASQYEVRYHSSAGDWIKLQTALSYSEFKLDSA
                     ETYTFQVRAYCNSTWTEWSKTVTYSSSFVNHDYVPNILADRAADASTMRIYWLKTPEI
                     SELRLRYRLAEASTWTKTSNSTGLITLTGLLPSSFYYYEYRAAYGSDLGAWSGLYFYT
                     PAAAATVAKEQEIKKDALQLVLSPNPTTNKIYIQSKHPPGAYYSITDAAGNILQTGTL
                     KTNEIVLPGSKKGLLTITIYKDDFKQSARVLKF"
     gene            complement(5056..5292)
                     /locus_tag="VEV83_08065"
     CDS             complement(5056..5292)
                     /locus_tag="VEV83_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45108.1"
                     /translation="MQKTLSDLDKLQAFITLRWADYKQAIKDNKSFEEVKTIYMQIRE
                     LEKQADELMQKANNLHSGTVRFSKPPDDSGFVVQ"
     gene            5564..5794
                     /locus_tag="VEV83_08070"
     CDS             5564..5794
                     /locus_tag="VEV83_08070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45109.1"
                     /translation="MAKVYPSNKPFSFEFDDEMDGLDNNKNRSSYKQDSFEDSELFHS
                     YWLLTIQMYAIPDPRKLRTQGTKTGGQSELDR"
     gene            complement(5840..6046)
                     /locus_tag="VEV83_08075"
     CDS             complement(5840..6046)
                     /locus_tag="VEV83_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45110.1"
                     /translation="MDDNILKNPELLKMQIELEESNYRYAFELQKDIGLLLRIKHHIR
                     YLKETLERLNTRTSSLSKKQTPPS"
     gene            6643..>6843
                     /locus_tag="VEV83_08080"
     CDS             6643..>6843
                     /locus_tag="VEV83_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45111.1"
                     /translation="MKVLPNPDKGDFQIDMNLPLNKANTTLQLYKYLGVKVWQQDLGM
                     MGGIIRRNVSMENKITIRFVRGD"
BASE COUNT         2040 a         1378 c         1421 g         2004 t
ORIGIN      
        1 atcaagaact ccacaatcag caaataattc tgtggctgct cactatatag ggcagcatta
       61 cggaggaggt attatttttt ttatcgatag tacagaacaa catgggttaa tagccgatac
      121 agccgacctt ccaaagagag cgccatggga tccaaacaat gtatatacga caacaggggc
      181 aataaaaaag agtatcggca atggttattt aaacacacag caaattgtct cagcattagg
      241 tgattcagga agatatgcag ccttcaaatg ctggaattat aaaaggcatg gatatagaga
      301 ctggtttttg ccatcaaaaa atgaactgaa tgaattgttc aaacaaagga atgttgttgg
      361 aggctttgca agtttctttt attggagttc gaccgaaatc gataacagtg atgcgtggga
      421 cgtggacttt ttcgatggca gcaatggcta cggcggtaag ggtaatgctt tttcagtacg
      481 tgcaattcgg gctttctaaa tattaaacac atcacagcat gactccaaag gccagcagca
      541 gaacatattt tcaggcacac agcaaagcgc agcgtgacca accaggagtt cagaaaggta
      601 ctgaattgaa agtattaaac agattagccg gcttaataat atttattttc cttctttcag
      661 gttgcacaaa atatattgat agcataacca cgtggaagaa cggagaagaa atttgctttt
      721 tgattaacat atcaggtctt cctacgggag caaccgattc tataaccatt agtctcgttg
      781 caggtgatac aaaacaaggc acctttagag gcggtaatgg gtatcataag atttgtatag
      841 ctgtgccagg tggtatgcct gcgccaacaa cacatatcac ggcgctggtg aaagagactt
      901 catcaaatgg aaaatccggt caaacggagg cgatagacaa gcagctaaaa tctatagata
      961 caaccgcacc tgctattcca accggaacaa ccgtgcattg attttaccga aaggcacaaa
     1021 gcaaagctta cgtaacaaaa ggtaactagg ccctttgaga aaattccgca aggcttaatc
     1081 tgttactcct ttgaccattt ccaatcggta cagggtcacc taacatccgc gcatctttga
     1141 taggctgcaa gtgtggatta catcccactt gcatccctgc ccttaaacaa tcgagtaatg
     1201 catccaactt ctgattaagt actgctaact gtgcatgtac agattgcgtt gcacaaccgc
     1261 tttacataag atactcatgt tgtgcgcagc tttgatacga aaaattatat atcaaacctg
     1321 tgtctggtga ttgccctata gattttaaac tttcacaaac gtgttctatc atcggtaatc
     1381 tcccggggcc atttccacgc atgccaaaca attatagcag taattatact ttcaacaatt
     1441 gcaaacaatg cagcaaatgt tagccattta tccgagtagt ttgatgcgat ccataccatt
     1501 agtgcagtgt aacatgtgcc aaatattaga ttgaataaac ggcttaattt aggtgttaat
     1561 aatattgata aaaaaatcat cagggcaggt ataatcaaaa cgcatgaggc accaaataac
     1621 ttctgcggtg tatttaataa actttcgccg cttattatac gttcgaccct ttttggaaca
     1681 tataattcaa aatagtcttc atatatatag cagaacatca cggatgtcca tagtactgcg
     1741 agtttaattt ttacgtttat tttgaaatct gctaacttat tagcatggtt catttttaag
     1801 ttaagttttg attagcgatg agaaaacata tttagtaact atagggtcaa ccaaaagtgc
     1861 cgtaacattt ctacattgtg agggcatggc aataacgact ggtcagcctc ctgcaaattc
     1921 aattgaaaaa cgaggttgaa gataaaacaa atgttgaatc gcgtaatgtc ggcttgaaca
     1981 aaagatcata agaattactc ttgctcaagt gcatttgtca accatgcttt acaaatcact
     2041 tgttgctttt tcgcctcatt cttcacttgg tatagagtga tgttcatgaa caattggcca
     2101 cgcgttattg atttttcgca atccaatcgt cagcctaaaa tccaattcta taaagtcttc
     2161 actattgctt ttgtccgcgc atttcattgt cgcaaaacaa aaagccacat tttcatctgc
     2221 gattacccgt aattcttgac tgtcaaacac acccaatttt gtaaatgcaa agaatttgtt
     2281 ccaggtttta cgatatgcgt ctatgccaat agatataaaa ggtttaggta ggtcaaacat
     2341 tataatatca gaatgattgg caagtatctt ttctatgtct ttattccgaa ctgcctgcgc
     2401 ccagttttct aagtggtgtc aaggcatgtg gcttttccgt tttgctgtac acacaatgtg
     2461 tcagtctgcg tgcaaaatca tcaaaacaac ttcattgttt tttatgactt agttatgcga
     2521 aaaatagtgc tcaacaaatt cttccattat aaatgttccc ttaggcgtgc aaaatagcag
     2581 gtgccaaaca tcaagacaga aacagtagat tcccgtaaaa catttaatat ttaaattatt
     2641 acctttaaat gcaaatgctg ccttatgaga gtctttacta ttcttatttt tcttgtacac
     2701 attcaaccgg ctgcgtccgc tcaatgtgat taccttactt cttttgggag tgatatcaac
     2761 ggtggaattt caaccactgt ctcggctggc ggcaaacttt tcttctcatc ttacgacacc
     2821 ctgcatggcc gtgaactttg ggttacagac ggcacaacag cgggcacaca tttggtgaaa
     2881 gatataaacc caggcattgc taacagcgta ccattctact ttcagtattt cgcttatgac
     2941 tttaaaggcg ttctgttttt ccaggcagat aacggtgtta ccggccccgc tttatggcgc
     3001 agcgacggta ccaaggcagg cacctggctt gttgcagacc tatacattga taactcggcg
     3061 cattctctta cgaactttgc ttccaccgat tctgtattgt attttactgc tgatggtaaa
     3121 accctatggc gcagcaacgg aacggcggcg ggcactcacc ctttagccta ttttaatgta
     3181 gcgcgcgaac ttactacgtt caagaacaat ctttattttt ctgccgatgc caacaatgcc
     3241 ggcgaagaat tatggaagag caacggtgcc accggtaaca ctgctttatt aaaagatata
     3301 aatggcgtat atggaacttc actcccgaac catcttcatg ctacagacaa tgccttatat
     3361 tttatggcaa ccacaaacgc cggatgtgag ctttggaaaa caaccggctc ttcggcaact
     3421 actcaaatgg tgaaagatat aaaccccggc aatgcagacg gtgttatagg cttttactgg
     3481 tatggagata tgtcgcatat cggaaatact ctttttttta gtgcgaatga tggtgtaaac
     3541 ggattgcagg cgtggaaaag cgatggaacg gatgcgggca cggtaagcat atcaactctt
     3601 gctcccggcg taagccaata ctgcaattat cctgttgtga atggaaaggt tttttattac
     3661 agtaatgaag atggatccaa ttacgtgcaa tacgatccgg ttatgaatgc aagttccgtt
     3721 accggctatc cattctatta ttattacccg caaacttttt tgggttcatg gttattctat
     3781 gcaggtcagg attcggtgta tggcccggag atttggcaat ctgctggtac accttcttca
     3841 acaagaagaa tacaggaaat acgacttgtt gataattttt ataacaaata cttgtcgggt
     3901 cctaatcgta ttgcaggaac agcaggcagc aaactcattt tcactgttgg aagagatcct
     3961 tttaatacag gaacatccct ttatagttat gatactgcac tggctttaac caatgccttc
     4021 gctccgtctg tgttgatacc ggttacactt tccagtaaga aaatgcattt ggtttggaac
     4081 cggatagaag ttgcaagtca atacgaagtg agatatcatt cgtctgcagg cgactggata
     4141 aaattgcaaa cggcgttaag ttattctgag tttaaattag attcagcaga aacatatact
     4201 ttccaggtga gagcatactg taatagtaca tggacggaat ggagcaaaac ggttacgtat
     4261 agtagttctt ttgtaaatca tgactatgtg cctaacatac ttgcagaccg agccgctgat
     4321 gcatctacca tgcgtattta ttggcttaaa actccagaaa taagcgaatt gcgattgcgc
     4381 tacaggctcg cagaagcgtc aacatggacg aagacatcta acagcaccgg tttgataacc
     4441 ttaactggcc tattaccttc ttctttttac tattatgaat accgcgcggc ttacggttca
     4501 gatttaggag cgtggtctgg cttgtatttt tatacacccg ctgctgcagc cacagtggca
     4561 aaagagcagg aaattaaaaa agatgctttg cagttggttc tatcgccgaa cccaacaact
     4621 aataaaattt atatacaatc aaaacatccg ccaggagctt actattctat aacagatgca
     4681 gcaggcaaca tattgcaaac aggaacttta aaaactaacg aaattgtttt acctggttct
     4741 aaaaaaggtt tgcttacgat aaccatttac aaagatgatt ttaaacaatc tgcaagggtt
     4801 ttgaagttct agttattgat cggttggtcg ctccgaatat acgtaaaact actttcgcaa
     4861 acacggccaa tgagagttgt atttgctaaa cagtgggtta tgttgatatt aaacttagtg
     4921 gtgcaatact tttggtttgc tgactgaaga taagatcgtt tccgcctttg caagaaagga
     4981 tggcggggtg cgtaagttta attcttttta ctcgaccgct tattgtttat ttcttttacc
     5041 gtttgtctat tgaaatcatt gaaccacgaa gccgctatca tcgggcggtt tggaaaaacg
     5101 caccgttcct gaatgtaaat tgtttgcttt ctgcatcaac tcgtctgcct gtttctccaa
     5161 ctccctaatt tgcatgtaaa ttgtttttac ttcttcaaag ctcttattgt ctttaattgc
     5221 ctgcttgtag tcagcccaac gcaacgttat aaatgcttgc agcttgtcaa ggtctgacaa
     5281 tgttttttgc atatgcagta gtttagtcgg gcgactgtaa ggtaggataa atgtcgcaga
     5341 tggaaacaaa acgcttcgat tgagcaagca taaaactcga acttacttcc ttatcatttc
     5401 agcccgacgc aacgcaggcc aattctgagg tgcttggcta aggtttagtc aagaacaaaa
     5461 gcatcactaa cgctaaacac aacacgatta gaacgaacga caacgcgttc tgtattttct
     5521 tatgtcgggc tgttaccggt gattgcgatc taatgatact ggcgtggcta aagtataccc
     5581 atcgaacaag cctttttcct ttgaatttga cgatgaaatg gatggtcttg acaataacaa
     5641 gaaccgcagc agttataagc aagatagttt cgaggatagt gagctctttc atagttattg
     5701 gttgctgacc attcaaatgt atgcaattcc cgatccaaga aagctgagga cccaagggac
     5761 gaaaacgggt ggccaatcgg agctggatcg ctaaacgcta tcattactca tgcaggctgc
     5821 tgttcacaac ttcaaaactt tacgatggcg gagtttgttt tttagataat gaagatgtcc
     5881 gggtgttgag acgctccagc gtctccttta agtacctgat atgatgtttt atacgcagta
     5941 atagcccgat atccttttgc agctcgaatg cgtaccggta attagattct tccagttcga
     6001 tctgcatttt caagagttca gggtttttca ggatattatc gtccatagga gctcatctat
     6061 taatgcgatt tgaaagctca caaattcgat accgctcttg catagcgaca gaagtagttg
     6121 tataatcagg tggaaaaaca actgtataga gactcaaccc tcaggagtat attgatgcga
     6181 gtggtaaata aaccgcaggt gcagcgtagg tagctatgtg ccggatgggg aataaaaaac
     6241 ccgctcgcgg gaaatatcct cataatacaa gcgggttaca tgctgatcct tgggtttttc
     6301 aatacggtca tcggatttta aaacttacca ccttatttaa ctcacaatat gaattgtaag
     6361 aaaaagccgc tcgatgctgg aaagtcggga atcctcgttc gcttgagcgg ctcatgctgt
     6421 tttgaagtga gtaagttaat gaaataaaag gttacgaagc aggcggcaac tggaaaaaca
     6481 tatatgcctg ttaggcgggg ataatatatc ttctgctgtg gttaatgttc aacacgttac
     6541 cgcgctccat ctttctaagc tcacgatttc ttatccgtat aaaactgctt tatgaagaac
     6601 attcacaatt gaaaaaacag taaggtcgtt gatgctctaa atgtgaaggt attgccgaat
     6661 cccgacaagg gtgattttca gattgacatg aacctgccgt tgaacaaagc aaacacgacg
     6721 ctgcaactgt ataagtattt aggcgtcaaa gtttggcagc aggacttggg aatgatgggt
     6781 ggaattatcc gcagaaatgt gagcatggaa aataaaatta ccatccggtt tgtgcgtggt
     6841 gat
//
LOCUS       DASQJI010000290         7030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_645732,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000290 DASQJI010000000
VERSION     DASQJI010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7030
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645732"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VEV83_08085"
     CDS             complement(<1..548)
                     /locus_tag="VEV83_08085"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HYK45112.1"
                     /translation="MPRYFLETSYMGTNYSGFQVQHNANTIQAEITRALQVFFNGQFS
                     LTGSSRTDAGVHALQNFFHFDSDIEVLASHLYNLNALLPYDIVVKKISPVNADAHCRF
                     DAVERTYRYYITRVKNPFVHGRAYYYPYQLNPENLKRFAQAVLRSNDFTSFSKKKTQV
                     KHFICNVKSSSWCINGDQWCYE"
     gene            complement(567..1892)
                     /locus_tag="VEV83_08090"
     CDS             complement(567..1892)
                     /locus_tag="VEV83_08090"
                     /inference="COORDINATES: protein motif:HMM:NF026121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4476 domain-containing protein"
                     /protein_id="HYK45113.1"
                     /translation="MKHSMKLISVLFFSLLVCSTLHAQQKHFIYIESAAKEPFAVVLN
                     GKVYSSSDDGYVIVPKLTDGSYDLTVSFPMNKYPEQSFKCVISKKDLGFKLQNTADNG
                     WALQNMQTQKVVANNNNEVAANSGFSSMLSEVVNDSNLTKKDLVAVPAPTSNSSELDN
                     SNKADNSVADNTNSTDKSNVVAGAAIAGGIIATNSDTTASVGSFVTDSIAQLEKISET
                     QVDTGTSLVFVDRTAGGVDTIKVFVPADTLNKVAPEQAGSNVIALGVTADEMNKTKAA
                     ENNEMVKSDAGVNESTAQADPNSVNNPFYKTADNNVPPKDNSSAGEKAAVTAQNDQPS
                     KTIETTNMVKDDCAAMISDNDFDKVKRKMFVQNDNNAMIQVALKGVANKCIMTEQVKT
                     LGSLFSSDDGRYNLYDALYIHVYDYGHYAQLESQILDPYYKKRFQALLR"
     gene            2065..4506
                     /locus_tag="VEV83_08095"
     CDS             2065..4506
                     /locus_tag="VEV83_08095"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK45114.1"
                     /translation="MKRILLTLALLRFVGAFAQENTEDSSWKKIYRAEATRINDLVNT
                     TLEVNFDFSKSYMYGKEWLTLHPHFYPTDSLTLDAKGMNINEVALFVNGKKTSLQYKY
                     DDSLFLRIKLNKTYKSNESYTVYIDYVSKPDEWKERGSAAISGAKGLYFINPRGDEKG
                     KPTEIWTQGETEHNSVWMPTIDKPNQKTTEQISMTVPDKYVTLSNGLLSGQKKNANGT
                     RTDTWKMDLPHAPYLFFMGVGDYAIVKDSYEGKEVAYYVEKEYAPVARAIFGHTPEMI
                     KFFSDKLGIDYVWPKYDQIVGRDYVSGAMENTTCTLHGESAYQDARQLLDGNSWEEAI
                     AHELFHHWFGDLATCESWSNITMNESFADFSETLWNEYKFGKDKGDETNYKGMQDYLN
                     SGNEDKSLVRFNYADKEDLFDYVSYQKGGRVLNMLRNYTGDDAFFKSLNKYLTENKFK
                     TGEAQQLRLAFESVTGQDLNWFWNEWYYGAGHPVLDISYTYDDAAHQAHMIVMQQQKG
                     QIFKMPVNVDIYNGQNKKRYQVWIQNPVDTFNFTYTQQPDLINFDADKILLCEKTEHK
                     TADNYRAQWKYAPLFLDRHEALEYFAENNMLADLSSGLNDKYAGIRSYVLDKLTENEN
                     AFANTSILEAVERLAHTEPDNKTRAKAVLFLASTRNAKYKSLFEQSLNDSSYTIDAAG
                     LAGLTALDFGDGYALSKKYLPNAKGDLADIGKSIIMAAGNADDYELVLQAFDKTPGVE
                     KYSLVPPLCDYLSKLTDTQKIEAGIDKVITFKKTVPESYKNETDPIIRESLNDLAKTK
                     GGDVQTYVNDQLKQP"
     gene            4767..>7030
                     /locus_tag="VEV83_08100"
     CDS             4767..>7030
                     /locus_tag="VEV83_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYK45115.1"
                     /translation="MNISELSLRRPVLATVMNIMIIVFGVTGFTFLAVRDYPAIDPAV
                     VSVNTSYTGANADIIETQITEPLEKQINGIPGIRTLSSSSSLGFSQITVEFNLGIDLE
                     AAASDVRDKVGQAARSLPQDIDAPPVVSKADANSDPILILALQSQTKSLLELSDYAEN
                     VLQQQFQTINGVSSVGLFGQKRYAMRLWLDPDKMNTYNVSFTDLRNALNTENIDLPPG
                     KIYGSNTELTIRTIGRLTSEQQFRDLVIREDSFGIVRLNDIATVELGAENYEQSWKYN
                     GVNAVGLFVAPQPGANNIAIADEFYKRLDAIEKSNRTDIQLKVLIDNTRNIRNSLSDV
                     KETLIIAFILVMLVIFAFFRNPLIAIRPLIDIPISLISTFFIMYIAGFTINVLTLLGI
                     VLATGLVVDDGIVVTENIFRKLEGGLPIRKAALAGSKEIFFAVISTSLTLAIVFLPVI
                     FLQGFIGRLFREFGVTLACAVLISAFVSLTITPVLNVYLTGKKAGHGKFYERTEPFFK
                     GMENGYKRLLTSFMTLRWVSFLIVAICIIIIWITMHTLQSEIAPLEDRSTIRFNLTAP
                     EGTSFPFMDRLGDSVANYLFDSVPEREFVFVRTPAGGATNSSQVRIGLVSPEERDRTQ
                     DEIANDLQRKLSRFNDARIFATQEQTISVGLGSRGGLPVQFVLENMDFDKLKTVIPKF
                     LDAARQDPTFSNVDVNLKFNRPEVQLSVDRMKVKDLGLTTEDVVASIQSAFSGGRLAY
                     FIQGANQYQVVAQV"
BASE COUNT         2003 a         1551 c         1586 g         1890 t
ORIGIN      
        1 atttcgtagc accattgatc gccgttgata caccaggatg aggacttcac gttacaaata
       61 aaatgcttta cctgtgtctt tttttttgag aatgaagtga agtcgttact ccgaagcacc
      121 gcttgtgcaa aacgttttaa attttctgga tttaattggt agggataata ataagctcgg
      181 ccatgcacga aaggattttt tacccgcgtg atataatacc tgtaggttcg ctcaacagca
      241 tcaaaacggc aatgagcgtc cgcgtttacc ggcgatattt tttttactac gatgtcgtaa
      301 ggcaatagcg cattcaggtt atataaatgt gatgcgagca cctcaatatc tgaatcgaag
      361 tgaaaaaaat tttggagcgc atgaacgcct gcgtcagttc ttgatgaacc ggttagtgaa
      421 aactgcccgt tgaagaaaac ttgaagtgcc cgggtgatct cagcttgtat cgtgtttgca
      481 ttgtgctgta cctggaaacc gctataatta gttcccatgt aggatgtttc aagaaaataa
      541 cgtggcattt ctttttgcgg cttgaattat cgcagcagcg cttgaaagcg ctttttgtag
      601 tatgggtcta atatctggct ttccagttgc gcataatgtc cataatcgta aacatgaata
      661 tataaagcgt catataaatt gtatctgccg tcatcacttg aaaaaaggct tccgagtgtc
      721 ttcacttgtt cggtcataat gcatttatta gcgacccctt tcagtgccac ctgtatcatc
      781 gcattattat cgttttgaac gaacatttta cgcttcacct tgtcaaaatc attgtccgat
      841 atcatcgccg cgcagtcatc cttcaccata ttcgttgtct cgatcgtttt tgaaggctga
      901 tcattttgcg ctgtcaccgc agccttctca cctgccgatg aattgtcctt tggtggcaca
      961 ttattgtcgg cagttttgta aaaaggatta ttaacagagt ttggatcagc ttgtgctgta
     1021 ctttcattaa ctccggcatc gctttttacc atctcgttat tttcggccgc ctttgtttta
     1081 ttcatttcgt cagccgtaac acccaacgcg atcacattgc tacctgcctg ttctggagca
     1141 accttgttta atgtatctgc aggtacaaat actttgatcg tatcaacgcc accggcagtt
     1201 cggtcaacaa aaacgagtga tgtacccgtg tcaacctgcg tttccgaaat cttttcgagt
     1261 tgtgcgattg aatcagtcac gaaacttcca acagaagcgg tcgtatcaga attagtcgcg
     1321 ataataccac cggcaatggc cgcgccggcg acaacgttcg atttatcagt agaattcgta
     1381 ttgtcagcga cagaattatc ggctttattt gaattgtcca gctcgctact gttactcgta
     1441 ggagcaggaa ctgcaacaag gtctttcttt gtaagattcg aatcgttaac tacctctgat
     1501 aacatactgc tgaacccgct gttggctgca acctcattgt tattattggc aaccaccttt
     1561 tgcgtttgca tgttttgtaa tgcccatcca ttatcagcag tattttgaag cttaaatccc
     1621 aggtccttct tgctgataac gcatttgaag gattgctcag gatatttgtt cataggaaaa
     1681 ctcaccgtaa gatcatagct gccgtctgtt aactttggaa cgataacata accatcatcc
     1741 gaggaactat atactttacc attaagcaca accgcgaaag gctctttcgc tgcactttca
     1801 atataaataa aatgtttctg ctgtgcatgt aaggttgaac ataccagcag agaaaagaac
     1861 agaaccgata taagtttcat tgaatgcttc atgttggatt ttttgatcgc ctgcgcaaaa
     1921 cctgttattg cagtacaaaa ctaacggaaa ataaaactgt cttttttcat gtctcatcag
     1981 caattgtatt ttaaccattt ataaattatt tggcaaacga gagcatcacc gtgctgtact
     2041 tttgtagccc ctcaaaaaaa agacatgaag agaattttgc taacccttgc attattgcgg
     2101 tttgttggcg cctttgcgca agagaatact gaggatagct cctggaaaaa aatatatcgc
     2161 gcggaagcaa cccgtatcaa tgatctcgtc aatacgaccc ttgaagtgaa ttttgacttc
     2221 agcaagtcgt acatgtacgg aaaagaatgg cttacacttc atccgcattt ttatccgacg
     2281 gactcattaa cactcgacgc aaaaggaatg aacattaacg aagtggcatt atttgtaaac
     2341 gggaaaaaga catcgctgca atacaaatat gatgacagcc tgttccttag gataaaactg
     2401 aacaaaactt acaaaagcaa cgagagttac accgtttaca tcgattatgt ttccaaacct
     2461 gacgaatgga aggaacgcgg aagcgctgcc atcagtggtg caaaaggttt gtattttata
     2521 aatccgcgcg gagacgaaaa aggtaagccc acagagatat ggacacaagg cgaaacagaa
     2581 cacaattccg tttggatgcc taccatcgat aaaccgaatc aaaaaaccac agaacagatc
     2641 tccatgacgg tgccggataa atacgttaca ctcagtaatg ggcttttaag cggccaaaag
     2701 aaaaatgcaa atggtacacg caccgatacg tggaagatgg atctgccgca cgcgccttac
     2761 ctgttcttta tgggcgttgg tgattacgcc attgtaaaag acagctatga aggaaaagag
     2821 gtggcgtact atgtagagaa ggaatacgca ccggtagcac gcgccatctt tggtcatacg
     2881 ccggaaatga taaagttttt ttctgataaa ctcggtattg attacgtgtg gccgaagtac
     2941 gaccagatcg tcggccgcga ttatgtaagc ggcgcaatgg aaaacactac ttgcacgctg
     3001 cacggagaat cggcttacca ggacgcgcga caattgctgg acggaaattc atgggaggaa
     3061 gcaattgccc acgagctttt tcatcactgg ttcggagacc ttgcaacttg cgaaagctgg
     3121 agtaacatta caatgaatga aagttttgct gattttagtg agacactgtg gaatgaatac
     3181 aagtttggaa aggataaagg tgatgaaacg aattataaag gcatgcagga ttatcttaat
     3241 agcggtaatg aagacaagag tttggttcgc ttcaactatg cggataaaga agacttgttc
     3301 gactatgtaa gttatcaaaa gggcggccgc gtgttgaaca tgctgcggaa ttatacaggt
     3361 gatgatgctt tctttaaatc gctcaataaa taccttactg aaaacaaatt caaaacgggc
     3421 gaggcacaac aactgcggct tgcatttgaa agcgtgaccg gacaagatct gaattggttt
     3481 tggaatgaat ggtactacgg cgcaggccat cctgtactcg atatcagcta cacgtacgac
     3541 gatgcggcgc accaggcaca catgatcgta atgcagcaac aaaaaggtca gatctttaaa
     3601 atgccggtga atgttgacat ttataacggt cagaataaaa agcgctacca ggtttggata
     3661 caaaatccgg tagacacttt taatttcacg tatacacagc aaccggatct gataaatttt
     3721 gacgccgaca agatattgct ctgcgaaaaa actgagcaca agactgccga caactaccgc
     3781 gctcaatgga aatacgcacc gcttttcctc gatcggcatg aagcattgga atactttgca
     3841 gaaaacaaca tgctcgccga tctctcgtcg ggattgaatg ataaatacgc aggcatcagg
     3901 agctatgtgc ttgacaaact cacagaaaat gaaaacgctt ttgcaaatac ttccatattg
     3961 gaagcggtgg aacgactggc ccacacggag cccgataata aaacgagagc gaaggctgtg
     4021 ttatttcttg cttcaacacg gaacgcgaaa tataagagtt tgttcgagca atcgttgaac
     4081 gattcttcat acaccataga cgccgcaggt ctcgctggtt taaccgcgct tgattttgga
     4141 gatggctacg ctctttcaaa aaaatatctt ccaaatgcaa aaggcgatct ggcagatatt
     4201 ggcaaaagca ttataatggc cgcaggtaat gcagacgatt acgagttggt tttgcaagcc
     4261 ttcgacaaaa cgccgggcgt tgaaaagtat agcctcgtgc caccattgtg cgactatctt
     4321 tcaaagctga ccgataccca aaagatcgaa gcgggaattg ataaggtgat cacgttcaaa
     4381 aaaactgttc ccgaaagcta caaaaatgaa accgacccga tcatccggga aagcctgaat
     4441 gatctggcaa agacaaaggg tggcgacgtg cagacgtacg tcaacgatca gctaaagcag
     4501 ccttagatct ttttcaccct tggagtaaca tcgttttcat ctcaggattt ttgcggttcg
     4561 tcccataatt tattcccgaa cattcttttt agaataaatt ggccttgcat aaatagattt
     4621 gctgaatatt gaacataacc ccgaagtgtg cgacgcaaca ggcgatgcca tgagtgcagg
     4681 taccggttac aaaataaatt attaaccggt aaccgggaag ccggcaatga ttaagacaac
     4741 gactcgctgt tcgccgctat cataagatga acatttcaga attatcgcta cgacgcccgg
     4801 tgcttgccac ggtgatgaat ataatgatca tcgtatttgg tgtaactggt ttcacgtttc
     4861 tggccgtgcg cgattaccct gctattgatc ccgcagttgt ttcggtaaac acgtcctaca
     4921 cgggggctaa tgcagacatc atcgaaacgc agatcaccga gccgctcgaa aaacagatca
     4981 atggaattcc gggtatccgc acgttgtcgt cttccagttc gctcggcttt agccagatca
     5041 ccgttgaatt taatttaggc attgacctgg aagctgccgc cagcgatgtg cgcgacaaag
     5101 ttggccaggc cgcgcgcagt ttaccgcagg atattgatgc gccgcctgtg gttagtaaag
     5161 ccgatgccaa ctctgacccg atactcatcc tcgcgcttca aagtcaaacg aaaagcttac
     5221 tcgaactgag cgactatgct gagaatgtgc tccaacagca gttccaaacg atcaatggag
     5281 tgagctctgt tggattgttc ggacaaaaaa ggtacgcgat gcgtttgtgg cttgatccgg
     5341 acaaaatgaa tacatacaac gtttcattta ccgatctgcg caatgcgctc aacacagaaa
     5401 atatcgatct gccgcccgga aagatctatg gaagtaatac cgagttaacg atacgaacta
     5461 ttggaagact tacatcggag caacaattcc gcgacttggt gatccgagaa gacagttttg
     5521 ggatcgtgcg tttgaacgac atcgcaacgg tcgaactcgg ggcggagaat tacgagcaaa
     5581 gctggaaata taatggtgtg aatgcagttg ggttgttcgt cgcaccgcag cccggcgcga
     5641 ataacatcgc aatcgcagac gagttttata aacgtctcga tgcgattgaa aaatcgaacc
     5701 gcactgatat acagttgaag gttttgatcg ataacacccg gaacatccgc aactcattgt
     5761 cagatgtaaa ggagacgttg atcatcgcct tcatcctcgt gatgctcgta atatttgcgt
     5821 tctttcgaaa cccacttatt gctatccgcc cattaattga tattcccata tcgctgatct
     5881 ccacattctt catcatgtac attgccgggt ttaccatcaa cgtattgacg ttgttgggaa
     5941 tcgtactcgc aaccggcctc gtagtggatg acggcatcgt ggtaacagaa aacatcttcc
     6001 gcaagctgga aggcggctta cctattcgta aggctgccct tgcggggagt aaagaaattt
     6061 tctttgccgt tatatcaaca tcgctaacgt tggcgatcgt gtttctgccc gtcatcttct
     6121 tgcagggatt catcggaagg ttgttccgcg aatttggcgt aacgctcgcg tgcgccgtgt
     6181 tgatctcagc ttttgtatct cttaccatca cgccggtcct taacgtgtat ctcacaggaa
     6241 agaaagccgg acatggaaaa ttttatgaac gaacggagcc cttttttaag ggaatggaaa
     6301 atggatataa acgactgctt acatccttca tgacactgag atgggtttcg tttctcatcg
     6361 tggcaatctg cataattatc atttggatca cgatgcatac gctgcagagt gagatcgccc
     6421 cgcttgagga ccgaagcact attcgcttca atcttactgc gccggagggt acaagttttc
     6481 cttttatgga caggcttggt gactcagttg caaattattt atttgattcg gttcccgaac
     6541 gcgaatttgt ttttgtgcgt acacccgccg gtggtgcaac caacagttca caggttcgca
     6601 ttggacttgt ttcacccgaa gaaagagaca gaacacagga tgagatcgcc aacgatctcc
     6661 agaggaaatt aagccgcttt aatgatgcgc gaatttttgc cacccaggaa caaacaattt
     6721 cggttggttt aggttcgcgt ggaggactgc cagttcagtt cgttttggaa aatatggact
     6781 tcgataaact gaaaacggtg atcccgaaat ttctggatgc cgcacgacaa gatccaacgt
     6841 tttccaacgt tgatgtgaac ctgaaattca accgtcctga agtgcagctt tcggttgatc
     6901 gtatgaaagt aaaggacctt ggtttaacca ccgaagatgt ggttgcatca attcaatccg
     6961 ccttcagcgg tggcaggctt gcctacttta tccagggcgc aaatcaatac caggtggtag
     7021 cgcaggttga
//
LOCUS       DASQJI010000291         5027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_185853,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000291 DASQJI010000000
VERSION     DASQJI010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5027
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185853"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VEV83_08105"
     CDS             complement(<1..1009)
                     /locus_tag="VEV83_08105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK45116.1"
                     /translation="MRRYPLPVLLCVSAVMLVSHLGMIQTNIMEARNLITAREMVKDG
                     HWIFTTIDGMPRYEKPPLPTWLTAVSGYFCDFKNMFVLRLPVALVSLMCVYFFYTLMK
                     KFQLKNNQPLHASLILITSFYIFFAGRDNQWDMYTHAFMVACIYFLVCALSETKNTST
                     NVLLSAFFLGCSFLSKGPVSLYGLFLSFLISYFITYRKYNAGNIKLLLFVLVVGLVIG
                     LSWPLYVKYFDSNASAALSKQTENWEDYDVKPFWYYWSFFTQSGIWTVPSFIALMYFY
                     MRRRVTDVKAYTFSFCWTITSLLLLSFIPEKKARYTLPILIPLAMNTSFYIQYLIDHF
                     KE"
     gene            complement(1018..1638)
                     /locus_tag="VEV83_08110"
     CDS             complement(1018..1638)
                     /locus_tag="VEV83_08110"
                     /inference="COORDINATES: protein motif:HMM:NF019214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HYK45117.1"
                     /translation="MTSWIVIGIGAIAQILFSSRLVLQWILSEKHRKVLTPVLFWEFS
                     LLASFLLFVYGYLRDDFAIMLGQTVTYYIYIRNMQLQHQWEKLPKALRVFIYVFPLLI
                     LVYGYNNGIYDRKNIFENEDIAPWLFVLGIISQLLFTFRFIYQWIYSEKRKESHLPLG
                     FWVISLSGSFLILVYAAFRRDPVLLAGQLTGFIVYFRNIVIIQKNK"
     gene            complement(1635..2354)
                     /locus_tag="VEV83_08115"
     CDS             complement(1635..2354)
                     /locus_tag="VEV83_08115"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK45118.1"
                     /translation="MTLPELSIIIPVFNEEDNLSRVQEAFEKYFPIARIPSKVIFVND
                     GSRDRSLELIREINRKNPLFTFISFEKNCGLSAAIKAGFDHATTKWVGYIDADLQTTP
                     EDFNILADYCNDYDLVTGVRTGRQDSFVKNASSKIANSIRRTFTHDGMDDTGCPLKII
                     KAEKAKAIPMFNGLHRFLPAMILLQKGKIIQVPVRAFPRVAGTSHFHLWNRLLGPLSD
                     CFAYLWMKRKYINYKVAEKNL"
     gene            2418..3380
                     /locus_tag="VEV83_08120"
     CDS             2418..3380
                     /locus_tag="VEV83_08120"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK45119.1"
                     /translation="MKVLVTGAAGFIGSHMAERMALSGFDVIGVDNLSNYYARELKLA
                     NVKCLNSKGIDFIEADLRYTADYESFSTDFDYIFHFAAQPGLSETSSFQDYLSNNVVA
                     TNELMNFSRQCNSLQMFVNISTSSVYGLDATLDENAAPSPVSWYGVTKLTAEQLVMAE
                     SRKEILQACSLRLYSVYGPRERPDKLYPKLIRAALCDETFTLVEGSLQHKRSFSFVDD
                     IIDGVASVIGREKTANNQVFNIGTDVQHTTAEGIAVVERLTAKKIQMELIAARQGNQT
                     NTKAVIDKAKKMLNYNPKTSLEEGIQKQINWFKENVSVFTDETS"
     gene            complement(3361..4056)
                     /locus_tag="VEV83_08125"
     CDS             complement(3361..4056)
                     /locus_tag="VEV83_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45120.1"
                     /translation="MTFRKRKLKSTEIVVLIIVFVLMTIGIIAAVVNKTWFEQKYVVE
                     DGFIEDLTLIPLTVLTITSLLYLARFTRKKNAWFFLTYLGIAFGSFFVLGEEISWGQR
                     IFHFKTSEFFEEHNSQDEENIHNLVLDGEKLNKIIFTDVLVAGVAIYLVGFPWFYGRN
                     DRFKKFIDDSGVPIPTLYQIISSLLVFGLSFLTFDSKGAELLEFGGCAMFMLIVLYPL
                     NSAARFQPNLSRR"
     gene            complement(4140..>5027)
                     /locus_tag="VEV83_08130"
     CDS             complement(4140..>5027)
                     /locus_tag="VEV83_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK45121.1"
                     /translation="PLRVIADKFNVIQMGVIAAERVFRVLDNDDVTPLASEAETYRSP
                     QRLNGEVEFDHVWFAYNEENYVLKDISFKVEAGETVAIVGHTGSGKTSIISLLNRLYQ
                     IKRGDIKLDDVSIEKYELDTLRRNIAVVLQDVFLFSGSVMDNITLHNSEIKREEVVEA
                     ARLIGVHDFIMQLPGNYDYNVMERGSTLSLGQRQLISFIRAILSDPAVLILDEATSSI
                     DSESELLIQKAIDTLITGRTAIVIAHRLSTIRKADKIIVLDKGEIKETGTHEELLALN
                     GLYAKLHSMQFEKQKAITA"
BASE COUNT         1526 a         1115 c         1024 g         1362 t
ORIGIN      
        1 tttctttgaa atgatcaata agatattgaa tgtaaaagct ggtgttcatt gccagcggaa
       61 tcaatatagg caacgtatag cgcgcttttt tttccgggat gaatgaaagc aacagcagcg
      121 atgttatcgt ccagcaaaat gaaaaagtgt aagcttttac atcggtaacg cgacgacgca
      181 tatagaagta catcagtgca ataaaagatg gaacggtcca aattccgctt tgcgtaaaaa
      241 agctccagta ataccaaaag ggttttacgt cgtaatcttc ccaattttct gtttgcttcg
      301 acaaggcagc actcgcattc gaatcaaagt atttcacgta caaaggccac gataagccaa
      361 taaccaagcc gaccacaaga acaaacaaaa gcagtttaat atttcccgcg ttgtatttcc
      421 ggtaggtgat aaaatatgag atgagaaaag aaaggaacag cccatacaat gaaaccggtc
      481 ccttgcttaa aaaagaacaa cccaaaaaaa atgctgacag caacacattg gtgctagtgt
      541 ttttcgtttc acttaatgcg caaaccaaaa aatatatgca tgcgaccatg aacgcgtgcg
      601 tgtacatgtc ccactggtta tcccttcctg caaaaaaaat atagaacgac gttatcagta
      661 taagcgaagc atgcaacggt tgattgttct tgagttgaaa cttcttcatc aacgtgtaaa
      721 agaaatatac acacattaat gaaacgagcg ccaccggcag ccgaagtacg aacatgtttt
      781 tgaagtcaca gaaatacccg gataccgctg tcagccacgt aggcaacggc ggcttttcgt
      841 agcgaggcat gccatcaatc gttgtaaaga tccaatggcc atcctttacc atttctctcg
      901 ctgtgatgag attcctggcc tccattatgt tcgtttgtat cattccgaga tgcgatacaa
      961 gcatcacagc cgaaacgcac aataaaacag gaagcggata tcttctcaaa aaagcagtca
     1021 tttatttttc tgaatgataa caatgttgcg gaagtaaacg ataaaaccgg tcaattgccc
     1081 ggctaataga accggatctc ttctgaacgc cgcatacaca aggatcagaa aagagccgga
     1141 aaggctaatg acccaaaaac ccagcggcaa atgcgactct tttctttttt cagaatagat
     1201 ccattgataa atgaaccgaa atgtaaaaag caactgcgaa atgatcccga gtacgaacaa
     1261 ccatggagct atgtcttcgt tctcaaaaat atttttcctg tcgtatatcc cattattata
     1321 accgtatacg aggatcaaca ggggaaacac atatataaaa acacgtaaag ctttcggcag
     1381 cttctcccat tgatgctgca actgcatatt gcggatgtag atataatagg ttacggtttg
     1441 tccaagcatg atcgcaaaat catcgcgcag gtagccatac acaaataata ggaacgatgc
     1501 cagcaagcta aactcccaaa agaggaccgg tgtaagaacc tttcggtgtt tttcagacaa
     1561 gatccattgc agcacaagcc tgcttgaaaa caatatctgt gcgattgcgc cgatgcctat
     1621 aacgatccag ctggtcataa atttttttcg gccaccttgt aattaatgta tttccttttc
     1681 atccataaat aagcaaaaca atcgctcaag ggaccgagta acctgttcca taaatgaaaa
     1741 tgcgatgttc ctgcgactcg cgggaaagca cgaaccggta cttgaatgat ctttcctttc
     1801 tgcaataata tcatagcagg taagaaacgg tgtaacccgt taaacattgg gatcgctttt
     1861 gctttttctg ctttaattat ttttaagggg caaccagtgt cgtccattcc gtcgtgtgtg
     1921 aaagttcgcc tgatgctatt ggcaattttt gacgaagcgt tctttacaaa tgaatcctgc
     1981 ctgcccgtgc gcacgcctgt tacaaggtca taatcgttgc agtagtctgc aagaatatta
     2041 aaatcttcag gtgtcgtttg cagatcggcg tcaatgtatc caacccattt tgtggtcgca
     2101 tgatcaaatc ctgctttaat agcagcgctt aatccacagt ttttctcgaa tgaaataaaa
     2161 gtaaatagcg gattcttcct gtttatttca cggatcaatt cgaggctcct gtcacgtgag
     2221 ccatcgttta caaaaatcac tttcgaaggg attcttgcga ttgggaaata cttttcgaaa
     2281 gcttcctgta ccctcgatag attgtcttct tcattaaata caggaataat gatacttagc
     2341 tcaggtaacg tcatcaatta tctcatttct gcgttaaaaa taaaacataa agtaacttac
     2401 gcccttttat tgcccacatg aaggttcttg ttaccggcgc tgcaggattt atcggctcac
     2461 acatggctga aaggatggct ctttcgggat ttgatgttat tggcgttgac aacttgtcca
     2521 attattacgc tcgcgaatta aaacttgcaa acgtaaaatg tttaaatagc aagggcatag
     2581 atttcatcga agctgacctt cgctatactg ccgactacga atcgttttcg accgattttg
     2641 attatatatt tcactttgct gctcagccgg gcctgtctga aacgtcttcc tttcaggatt
     2701 atctttccaa caatgtcgtc gcaaccaatg agctaatgaa tttttcgagg caatgcaata
     2761 gcctccaaat gtttgtcaat atttcaactt catccgttta tggcctcgat gcaacgctcg
     2821 atgaaaatgc agcgccatcg ccggtttcgt ggtacggtgt tacaaagctt accgcagaac
     2881 aattggtaat ggcagaaagc aggaaagaga tactacaagc atgttccctc cggctttatt
     2941 ctgtgtatgg gccgcgtgag cgaccggata aactttaccc gaagctgatc agagccgcgt
     3001 tgtgcgatga aacgttcacg ttggtggagg gaagccttca gcataaacga agtttcagtt
     3061 tcgtggatga tattattgat ggagttgcat cagtgattgg cagggaaaaa acagcaaaca
     3121 accaggtatt caatattgga actgatgttc aacatacaac cgcagagggc atcgctgtgg
     3181 ttgagaggct aacggccaaa aagatacaaa tggaattaat cgcagcgcgg cagggaaatc
     3241 aaaccaacac aaaagctgtc atcgacaaag cgaaaaagat gctgaattat aacccgaaaa
     3301 cgagcctgga agaaggaata caaaaacaga taaattggtt taaggagaac gtttcggttt
     3361 ttaccgacga gacaagttag gctgaaaacg tgcagcgctg ttgagtgggt aaagcacgat
     3421 cagcatgaac atggcgcatc ctccaaactc gagcagttca gcaccctttg aatcaaacgt
     3481 gaggaacgaa aggccaaaga ccaaaaggga ggagatgatt tgatacaacg ttggtattgg
     3541 tacacccgaa tcgtctataa attttttgaa cctgtcgttc cttccataaa accacggaaa
     3601 cccgacgaga taaatggcta cgcctgcaac cagtacatca gtgaaaatga tcttgttcaa
     3661 tttttcgcca tcaagaacga gattgtgaat attctcttcg tcctgcgaat tatgttcctc
     3721 gaaaaactct gaggttttga aatgaaaaat cctttgtccc caactgatct cttcgcccaa
     3781 cacaaaaaag cttccgaaag cgatacccag gtacgtaaga aaaaaccacg cgttcttttt
     3841 gcgcgtaaac ctggcgagat aaagaagaga tgtgatcgta agaaccgtga ggggtatcaa
     3901 agtcaggtct tcaataaatc catcctccac cacatatttt tgttcaaacc aggtcttgtt
     3961 cacgactgct gcaataatgc cgatcgtcat taaaacaaaa acaataatta agacgacgat
     4021 ctcagtgctt tttagttttc gcttacggaa ggtcaatggc gtttgttttt tgtgggcgca
     4081 aatatctata atattctttt agcagcttca aaacgaaatc ggataccatc aaaatgaaac
     4141 tatgcagtta ttgccttctg tttttcaaat tgcatgctat gcaattttgc atacaggcca
     4201 tttagcgcaa gcaattcttc atgcgtgcct gtctctttta tttcaccttt gtccaataca
     4261 atgatcttgt ctgccttgcg gatcgtggac aaccggtgag caataacgat cgccgtgcgc
     4321 ccggtgatca atgtgtcaat cgctttttgg atcaacagct cgctttcaga atctattgag
     4381 gacgtggctt catccagtat cagcactgcc ggatctgaca agatcgcccg tatgaacgaa
     4441 ataagttgcc gttggccaag gctcagtgtg ctgcctcttt ccatcacgtt ataatcataa
     4501 tttccgggta gttgcatgat aaagtcgtgc acaccaataa gcctcgcagc ctcgaccact
     4561 tcttctcttt ttatttctga attgtgcaat gtgatgttat ccatcacaga gcctgagaaa
     4621 agaaacacat cctgcagcac gacagcgata tttcgccgca acgtatcgag ctcatatttt
     4681 tctatggaaa catcatccag ctttatgtca ccccgcttaa tttgatacag gcggttcagc
     4741 aaactgataa ttgaagtttt accgcttccc gtatgtccga caattgcgac cgtttcaccg
     4801 gcttcaacct taaacgaaat atctttcaac acgtagtttt cttcattata tgcaaaccaa
     4861 acgtgatcaa attcaacttc tccgttcaat cgctgtggtg aacgataagt ttcagcttcg
     4921 gaggcgagcg gcgtaacgtc atcattatcc aaaactctaa acacacgttc ggctgcaata
     4981 acgcccatct gaattacatt gaacttgtcg gcgatcacac gcaacgg
//
LOCUS       DASQJI010000292         9917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_953723,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000292 DASQJI010000000
VERSION     DASQJI010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9917
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953723"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1430
                     /locus_tag="VEV83_08135"
     CDS             324..1430
                     /locus_tag="VEV83_08135"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HYK45122.1"
                     /translation="MEYRRMPIEIEAPEGYGYENIECNLSESSFTDQRLSDLRISVDN
                     LLLFYGDHKGKAELRKLIAAEDNLDADDVLITPGAAAALFIVATSLLDKNDHVVVAKP
                     NYATNIETPRALGATVSYLNLRFEDRYQLDLDELQNLITEQTKLVSLTYPHNPTGVMI
                     DEATLRKIIDIVESKNTWLLFDETYRDMCFGPQLLVAASLSERVISVSSMSKSYGLPG
                     IRIGWLICSNKKLMEIFLAAKEQIFITNSVVDEEIAFQYLLSKEKNFPRVKQVIQKNF
                     SIIKDFMDSQKVLEWIQPQGGCVCFPRIKKEIDINSTRFHEVLLHKYHTYVGRGHWFE
                     EDGRYMRIGYSWDQTEKLQKGLSNILKAIHETKR"
     gene            1483..3525
                     /locus_tag="VEV83_08140"
     CDS             1483..3525
                     /locus_tag="VEV83_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HYK45123.1"
                     /translation="MLAGLNNVTFEFGSRIIFENATWHIQPGERIGLIGYNGTGKSTL
                     LKLLVGEFQPSAGSVERSRNTSIGYLHQDLLSFDTRDSILNVALSAFEKVQQLEKEIE
                     EIGKKLEATSDEKLLHIYSDKLHELEVLGGYNIHHKTEEVLQGLGFANSDLNRPYEEF
                     SGGWRMRVLLAKMILQQPDLLLLDEPTNHLDLPSIEWLEKYLQHYKGSVVIVSHDKYF
                     LNRMVTKIVEIYQQQLNIYSGNYDLYETEKQQRIELQQRAYENQQDYIRQNERLIERF
                     RAKASKAAMAQSLIKKLDKLERIESAQLERPNLKINFRVDKQPGKILASLKHATKAFG
                     DNLILNNTGAEIDRGDKIALIGANGKGKSTILRMIAGTEPFTGERTWGHNVEESFYAQ
                     HQLEALNINNTVLEEMLLCGSGKTELELRTLLGCFLFSGDDVEKKIRVLSGGEKARVA
                     LAKVIVGKANFLLLDEPTNHLDIHSVELLSEALNKYEGSYILVSHDRYFISKTANKIW
                     EIIDHEIKEFKGGYEEYVEWKERMKASNVNRESAPERLSQAVAGVNSEFPPERPIRAG
                     SIVNEQAANPKSQSTNVQHQTSSIKLQTSNNEHREQKKELQRLQKQFSKLEGHLNELN
                     QQKSNIEADLALPESYADKNRFLQLEASYASVQQKMAAANKEYEDLFEKIMMLEQT"
     gene            complement(3821..4183)
                     /gene="rplQ"
                     /locus_tag="VEV83_08145"
                     /pseudo
     CDS             complement(3821..4183)
                     /gene="rplQ"
                     /locus_tag="VEV83_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660847.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
     gene            complement(4323..5321)
                     /locus_tag="VEV83_08150"
     CDS             complement(4323..5321)
                     /locus_tag="VEV83_08150"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HYK45124.1"
                     /translation="MAILNFQKPDKIILQKATDFEGSFEFRPLEQGYGLTIGNALRRV
                     LLSSLEGYAITGIKIEGVDHEFATVKGVTEDVTEIILNLKQVRFRKTVDHDVASEKVS
                     MSIKGNSEFTAGMLNDNMQSFEVMNPQLVICTMDPTAKLDIELTVSKGRGYVPSEENR
                     VKDLPLGVIPIDSIHTPIKNVKYAVENYRVEQRTDYEKLLLDVSTDGTIHPEEAVKQA
                     SRILIQHLMIITDENITFDNKEDRKEDVVDEQMLQLRKVLKTPLEDLDLSVRAFNCLK
                     AAKINSLSELVQYEQEDLMKFRNFGQKSLSEIEQVLSERGLHFGMDLSKMGLDDIG"
     gene            complement(5438..6043)
                     /gene="rpsD"
                     /locus_tag="VEV83_08155"
     CDS             complement(5438..6043)
                     /gene="rpsD"
                     /locus_tag="VEV83_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HYK45125.1"
                     /translation="MARYNGPKTKISRIFGEPILGNGKWLNKNSNPPGQHGASRKRKT
                     LGEYAVQLKEKQKAKYTYGVLERQFRKTFEEAARLKGVTGENLIKLLEARLDNTIFRL
                     GIAPSRPAARQLVSHKHVTVNGTVVNVPSFQLKPGDKIGLKEKTEGNSSITSQIRGKS
                     PKFNWLDWNDAEKKGVFITYPERESVPENIREQLIVELYSK"
     gene            complement(6200..6601)
                     /gene="rpsK"
                     /locus_tag="VEV83_08160"
     CDS             complement(6200..6601)
                     /gene="rpsK"
                     /locus_tag="VEV83_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012397714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HYK45126.1"
                     /translation="MAKAQASAKAAAKKRIVKVDSYGDAHINATFNNLIVSLTNKHGQ
                     VISWSSAGKMGFRGSKKNTPYAAQMAAQDAAKVAVDAGLRKVDVYVKGPGAGRESAIR
                     ALATNGIEVAMIKDVTPLPHNGCRPPKKRRV"
     gene            complement(6681..7061)
                     /gene="rpsM"
                     /locus_tag="VEV83_08165"
     CDS             complement(6681..7061)
                     /gene="rpsM"
                     /locus_tag="VEV83_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HYK45127.1"
                     /translation="MARIAGVDLPKNKRGEIGLTYIYGIGRSTARYILDKAGIDYDKK
                     VNDWNDDDLNHIRTVITNEIKVEGALRSEVQMSIKRLLDIACYRGLRHRKGLPVRGQR
                     TRTNSRTRKGKRKTVAGKKKAPKK"
     gene            complement(7167..7283)
                     /gene="ykgO"
                     /locus_tag="VEV83_08170"
     CDS             complement(7167..7283)
                     /gene="ykgO"
                     /locus_tag="VEV83_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011553357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HYK45128.1"
                     /translation="MKVRASVKKRSADCKIVRRKGKLYIINKKNPRFKQRQG"
     gene            complement(7355..7573)
                     /gene="infA"
                     /locus_tag="VEV83_08175"
     CDS             complement(7355..7573)
                     /gene="infA"
                     /locus_tag="VEV83_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HYK45129.1"
                     /translation="MSKQPLIQQDGSIIEALSNAMFRVKLENGHEILATISGKMRMNY
                     IRILPGDKVKVEMSPYDLSRGRIILRYK"
     gene            complement(7651..>9917)
                     /locus_tag="VEV83_08180"
     CDS             complement(7651..>9917)
                     /locus_tag="VEV83_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45130.1"
                     /translation="QGRGRLPLFLNSYKSLYLENKRYSYMKLRNGSLKDYVPDHYPLG
                     YMLVAYGREKYGDDFWKNVTHDAASFHPLFYPMQHAVKKYSNVSFDQFVQNAFSFYNQ
                     QWTGQTIPGLQFLDSTQTNNVVDEKYPYAAADGSVIMLQDGFRDNPGFVVREADGSIK
                     KIATQSICTDDYFSYNNGKIVYASFKPDPRWGNREFGEIRVVDVPSGRERKFVPAVSD
                     HGIRPKFFAPDISHDGQQIVVIENSSAQRSFIHLIRISGELIRSFENSADHTYSYPKF
                     SADDKSIYVCDRNAKGEMSILKGSVDGGSLIQIMPYSNRIVGFPVVDGDTLFFSCSNN
                     GFDESWAYINSQQKTYRVASAATGLYQASMSNDKLIGSVFTADGYRLASLSPAWQPIT
                     SGDTLKDLYVFKPFQRADNSLLQNVSERDLKASKYSKASGLFNFHSWNPYFSDPDYSF
                     ILYGQNVLNTFQSQLYYTYNRDEHFHRVGYTGIYGGWYVQPFADVNQTWSRSRVLNAD
                     SSLDWNETKVAAGLQLPLNFTGGKMYRRLHPSVSYNFVATQWQGIAKELLQNSSFSYL
                     QTRITYSQYIQQAIQHIYPRFGQSFSIQYRTGSTAHQLLLNGYLYFPGVVKTHNIVIN
                     VAYQQRDTSGKYFFDNNFPFSRGYTAVDYPRLWKAGANYHFHLFYPDWGFANLVYFLR
                     VRANLFYDFTEAKSLRTGNHFDFRSTGGEIFFDSKWWNQQFISFGIRYSRLLNEDVKG
                     MSADQWEFIVPITL"
BASE COUNT         2716 a         2217 c         2131 g         2853 t
ORIGIN      
        1 atatgcagtt tgatgcggca atcacttttt ttgaaaaggc gatccttgtt tcgctcaacg
       61 acgaaaaaat aaaagaatac cgaaacgaca tagaccgttg cagaaaaaag atcgagcttg
      121 ctttgagcca caaagactgg acgggacaca aaaaatgagt taagctgatc ttttagttac
      181 cgttgaactt ccggacataa tgattgaatc attggagctg tacgtttccc gcatgcattc
      241 cattgtgcct tttagcgacc actctaactt caccaaaaag tgggtgatat ttttatgcac
      301 taatttttaa aaaaaatcct actatggaat acaggcgaat gcctattgag atcgaagcac
      361 cggaaggata cggttatgag aacatcgaat gtaacttatc agaaagttca tttaccgatc
      421 agcgattgag cgacctccgt atctcagtag ataatctgtt gttgttctat ggtgaccata
      481 aaggcaaagc ggagttgcgg aaattgattg ctgcagaaga caatttagat gcggatgatg
      541 ttttgataac gccgggtgcg gcggccgcgc tcttcatcgt tgcaacgtca ttattagata
      601 aaaacgacca tgttgtagtc gccaaaccga attacgctac gaatattgaa acaccgcgtg
      661 cgctcggcgc aactgtcagc tacctgaatc tgcgcttcga ggatcgctat caactggatc
      721 ttgacgaatt acaaaacctt atcactgaac aaacgaaact tgtcagcctc acctatccgc
      781 acaatcccac tggcgtaatg atcgatgaag cgacattgag aaaaattatt gatattgttg
      841 aaagcaaaaa cacatggctg ctttttgatg aaacgtaccg tgatatgtgt tttgggcctc
      901 aattactggt ggcagcatct ttgtcggagc gcgtcatcag cgtcagctct atgtcaaaat
      961 cttacggttt gcccggaata aggatcggct ggcttatttg cagcaataaa aaattaatgg
     1021 agatattcct tgcagccaag gaacagatct ttataactaa ttctgttgtg gacgaagaga
     1081 tagcctttca gtatttgttg tctaaggaaa aaaattttcc ccgcgttaaa caggtaattc
     1141 agaaaaattt ttcgatcatt aaagatttca tggacagcca aaaggtgctt gaatggatac
     1201 agccgcaggg tgggtgtgtt tgtttcccgc gtatcaaaaa agaaattgac attaatagca
     1261 cccgttttca tgaagtgtta ttgcacaaat accacacgta tgtcggccgc gggcattggt
     1321 ttgaagaaga cgggcgctat atgcgtattg gctatagttg ggaccaaaca gaaaaacttc
     1381 aaaaaggcct gtcaaatatt ctcaaggcca tccacgaaac aaaacgctaa gatgcttata
     1441 cagaatgctg caatcattta gttttgcgca gcagaatttt ctatgctcgc aggattaaat
     1501 aatgtaacat ttgaatttgg ttcacggatc attttcgaaa atgcgacctg gcacattcag
     1561 ccaggtgaac ggatcggcct gatcggctat aacggcacgg gcaaatccac attattgaaa
     1621 ttgctggtcg gagaatttca accctcggcg ggatctgttg aaagaagccg caatacatcg
     1681 attggttatt tgcaccagga ccttctcagt tttgatacac gcgattctat tctgaatgtt
     1741 gctctcagcg cctttgaaaa agtgcagcag cttgaaaaag aaattgagga aatcggaaaa
     1801 aagctcgaag caacgtccga cgaaaaactg ctgcacattt attcggacaa gttgcatgaa
     1861 ctggaagtgc ttggcggcta taacatccat cataaaaccg aagaagtact acaggggctc
     1921 ggcttcgcca acagcgactt aaatcgcccg tatgaagaat tcagcggcgg atggagaatg
     1981 cgcgtgctac ttgcaaaaat gattttacaa cagcccgacc ttttgcttct tgatgaacct
     2041 acaaaccatc ttgaccttcc gtcaatcgaa tggctcgaaa aatatttgca gcactacaag
     2101 ggaagtgtcg tgatcgtaag ccacgacaaa tattttctga accgcatggt gactaaaatt
     2161 gtcgagatct accagcaaca attgaatatt tattctggca actatgatct ttacgaaacg
     2221 gaaaagcagc agcgtatcga gttgcagcaa cgggcatacg aaaaccagca ggattatatc
     2281 cgtcagaacg aaagattaat tgaacgtttc cgggcgaaag ccagtaaggc ggccatggcg
     2341 caaagcctga taaaaaaatt ggacaaatta gagcggatcg aaagcgcgca gcttgaacgg
     2401 cccaacttaa aaataaattt tcgtgttgat aagcagcctg gcaaaattct cgcttcgcta
     2461 aagcatgcaa cgaaagcatt cggtgataat ttgatcctta acaacaccgg cgctgaaatt
     2521 gatcgcggtg ataagatcgc tttgatcggt gcaaatggta aaggcaaatc caccatttta
     2581 agaatgatcg ccggaactga acccttcacg ggtgaaagga cgtggggcca taatgtagaa
     2641 gaaagttttt atgcacagca tcagctcgaa gcgctgaaca taaacaacac ggttttagaa
     2701 gaaatgctgt tgtgcggcag cggaaaaacg gagctggagt tgcgtacatt gctcggctgt
     2761 tttttattca gcggtgacga cgtggaaaaa aagatccgcg tcttaagtgg cggtgaaaaa
     2821 gcaagagtgg cattagcaaa ggtaatagtt ggaaaagcga atttcttgtt gcttgatgaa
     2881 cccaccaacc acctggacat tcacagcgtt gaattattga gcgaagcgtt gaacaaatat
     2941 gaaggcagct atattttggt gagccatgac cgttacttta tttcgaagac agccaataag
     3001 atctgggaga tcatcgatca tgaaataaaa gaatttaagg gtggatacga ggagtatgtt
     3061 gagtggaagg aacggatgaa ggcttcaaac gtgaatcgtg aatccgcgcc tgagcgattg
     3121 agtcaggcag tagcaggtgt aaatagtgaa tttccgcctg aacgacccat tcgggcaggg
     3181 tcaattgtga atgaacaagc cgccaacccg aaatctcaaa gcacgaacgt tcaacatcaa
     3241 acgtctagca tcaaacttca aacttcaaat aacgaacatc gtgaacaaaa gaaagaactg
     3301 caaagactgc aaaaacagtt cagtaaactc gagggccatt tgaatgaact taatcagcaa
     3361 aaatcaaaca tcgaagctga ccttgccctg cctgaaagtt acgcggacaa aaataggttt
     3421 ctgcagttag aagcgagtta cgcatccgtt caacaaaaaa tggcggctgc aaataaagag
     3481 tacgaggatt tgtttgaaaa gataatgatg ctggaacaga cttgacaggt tttttgaaat
     3541 tgtggggtct ataaagaaga aaggcccgct ctttcgagca agccttctcc aaaatgtgaa
     3601 tgatttttta ttcttccgtt cccttttcaa tatttgtttc tccttccacg ggagcttccg
     3661 ttttcgtttc tgtggaagac gaagtttcgg caggtttggc ggccaccgct tcggcagctt
     3721 tcggagcttc tgctttcgct ggcgatttct taccacgacc acggcgtgtt ttcttaccgg
     3781 tatccactgc gactcccttc ccgtacacct cgttgaaatc cacgagctcg atcaaggcca
     3841 tttcggcatt atcaccggta cgtgcgccta atttgatgat cctggtataa ccacccgggc
     3901 gaccggatac tttttgagca acaactgtga acaattcttt caccgccgtt ttatctttta
     3961 aataactgaa caccacccga tgctggtgca tgatctgctg ctggccttca cccttgcgag
     4021 tcttagtgat cagcggctca atgtatgttc gtaatgactt tgcttttgca agtgtggtta
     4081 cgatgcgctt atttacgatc aactggctgc caagattggc cagcaacgca tccctgtgtg
     4141 cctttgttcg gctgagattt tttattttgt ctccgtgacg catgacgttt aaatttttac
     4201 ctctgtaccg tgtcaggaat tacagaggac tgaccctaac ccctaaagga attgggtcta
     4261 ttgttataaa tgattcttca agaacttact tttctgccct tcagaggagg ttggtcgggt
     4321 tattacccaa tatcatccaa tcccatcttg ctcaaatcca tgccgaagtg caagcctctt
     4381 tcagacaaca cctgttcgat ctcgctcaat gacttctgac cgaaattgcg gaacttcatc
     4441 aggtcttcct gctcgtattg aaccagctcg cttaagctat tgatctttgc cgccttcaaa
     4501 cagttgaaag cgcgcacaga aagatcgagg tcttctaaag gcgttttcaa cactttacgc
     4561 aactgaagca tttgctcatc aacaacatct tctttcctgt cttctttgtt gtcgaacgta
     4621 atgttttcat cggtgatgat catcaggtgc tggatcagaa tgcgggaagc ctgtttaacc
     4681 gcttcttccg gatgaatagt tccgtcagta gacacatcga gcagcaattt ttcgtagtct
     4741 gttctttgct caacacgata attttctaca gcgtatttca cattcttgat aggcgtatga
     4801 attgaatcga tcgggattac gccaagcggc aggtccttca cgcgattctc ttctgaagga
     4861 acgtacccac gtccttttga gactgtgagc tcaatatcca atttcgcagt cgggtccatt
     4921 gtgcagataa caagctgtgg gttcatcacc tcaaaacttt gcatgttatc gttcaacatt
     4981 ccggctgtga attcagagtt gcctttaatg ctcattgaaa ctttctcact tgctacatcg
     5041 tggtcgacag ttttcctgaa gcgcacctgt tttaagttga gaatgatttc cgttacatct
     5101 tccgttacac cttttaccgt tgcaaactca tggtctacgc cttcgatctt aattcctgtg
     5161 atcgcgtatc cttcaaggct gctcaataag acccttctga gggcatttcc gatagttaaa
     5221 ccgtaaccct gttccaaagg gcgaaattca aatgaacctt caaaatcagt tgctttttgt
     5281 aagatgatct tgtcaggttt ctggaagttt aaaatggcca ttttatattc cgtgttttat
     5341 ttttatttta ttatgaactc aactgcattg ctgctattag gctttacttg cgtcgcactc
     5401 ttgtacgttc tgttcaatac tccaacccag aggcgattta cttgctgtac aactccacga
     5461 tcaactgctc cctgatattt tcaggaacgc tttctctttc gggatatgtg atgaacacac
     5521 cttttttctc agcatcattc caatccagcc aattgaactt cgggcttttg ccgcggatct
     5581 ggctggtgat ggaactgttg ccttcagtct tttctttaag gccgatctta tcgccaggtt
     5641 tcaattgaaa tgaaggaacg tttaccactg ttccattcac ggtaacatgt ttatgcgaca
     5701 cgagctgtcg tgcagcaggt ctcgaaggcg caatccccaa ccgaaaaata gtattgtcga
     5761 ggcgggcttc cagtaattta atgagatttt cgcctgttac acctttaagc cgggctgctt
     5821 cctcaaatgt tttgcggaac tgacgctcta acacgccgta tgtgtacttt gctttctgtt
     5881 tttctttcaa ctgaaccgcg tattcaccga gggttttacg tttgcgcgat gcgccgtgct
     5941 ggccgggagg gttgctgttt ttgttgagcc atttaccatt gcctaaaata ggttcgccga
     6001 aaatacgact gatctttgtc ttgggaccgt tgtaacgtgc cataattatg tactgatttt
     6061 ttggtgacga tgcagcatca ataaaaatct taaaataaat gccacaccct gttatttaca
     6121 atctacgatt tcggatttac gatttaggaa gtcgacgtgg ctaaaatcgt aattcgtaaa
     6181 tcgtacatcg taattcttat taaactcttc ttttctttgg aggacggcaa ccgttgtggg
     6241 gtaacggagt aacatccttt atcattgcca cttcaatgcc gtttgttgct aatgcgcgaa
     6301 ttgcgctttc gcgtcctgca cccggacctt ttacataaac gtctaccttt ctcaacccgg
     6361 catctacagc aactttcgcc gcatcctggg cggccatctg tgccgcatac ggagtattct
     6421 ttttagaacc gcgaaatccc atcttaccgg cagatgacca actgataacc tggccgtgct
     6481 tattggtgag ggaaacgatg agattattaa aagtagcatt gatgtgcgca tcgccgtaag
     6541 aatctacttt gacgattctc ttttttgcgg cggcctttgc gcttgcctgt gcttttgcca
     6601 tacttattta agttccaaat ctcaagctcc aaatctcaaa aacgttttca attagagcct
     6661 ggcatttgta ttttgtgatt ttacttttta ggtgctttct tcttaccagc gacggtttta
     6721 cgtttacctt tcctcgtacg gctgttggta cgggtacgct gaccgcgaac cggcaagcct
     6781 ttacgatgac gaagtccgcg atagcaggca atatcaagta agcgtttaat gctcatttga
     6841 acttcgctgc gcaatgcgcc ttccactttt atttcgttgg tgataactgt acgaatgtga
     6901 ttgagatcat catcattcca gtcgttgacc tttttatcgt aatcaatccc cgctttgtca
     6961 aggatataac gggcagtaga gcggcctata ccgtagatat aagtcagccc tatctctcct
     7021 cttttatttt ttggtaaatc aactccggca atacgagcca taatttctga ttataggtat
     7081 ttgtttttga ttttttggct tcgagcttcg agctgtgagc ttcgagtcct gctcgtagct
     7141 cgcagctaat ggctcacggc tttttcttaa ccctggcgct gcttaaagcg cgggttcttc
     7201 ttattaatga tgtacagctt gccctttctg cggacgatct tgcaatcggc actgcgtttt
     7261 tttactgaag ctctcacttt catattttcc agctttgggc tttgagtttt cagcctcgag
     7321 ctcgtagctc gcagctcatc gctcgccgct tttgttattt gtatcttaaa atgattctcc
     7381 ctctcgaaag atcgtaaggg ctcatctcaa cttttacctt atcacccggc aggatgcgga
     7441 tataattcat gcgcatttta cctgaaatgg tcgccaggat ctcgtgccca ttttccaact
     7501 tcaccctgaa catggcgttg ctaagcgcct caattatact tccatcttgt tgaatcagtg
     7561 gctgcttgga cataaatttg ggagcgcaaa gatataagaa ttgggcgaac tatgaaattt
     7621 ttagacaaaa ttcacattta gataaagggc ctacaaagtt atgggaacaa taaattccca
     7681 ctggtcagcg ctcatgcctt taacatcttc attcagtagc ctgctgtacc tgatcccaaa
     7741 gctgataaat tgctggttcc accatttgct gtcgaaaaat atttcgccac cggtggatct
     7801 aaagtcgaag tggtttcctg ttcgcaggct ttttgcttcc gtgaaatcgt aaaataagtt
     7861 agcgcgcacc cgcagaaaat aaacaaggtt tgcaaaaccc caatcagggt aaaataaatg
     7921 gaaatgataa ttagcgccgg ccttccagag tctcgggtag tccaccgctg tatagcccct
     7981 cgaaaaagga aaattgttat cgaaaaaata tttacccgaa gtatcccttt gctggtaggc
     8041 aacgtttatg acaatgttat gggttttcac gacgccggga aagtacaaat agccattcag
     8101 caataactgg tgcgccgtac tgccggtcct gtattgaata gaaaacgatt gaccgaatcg
     8161 tggataaata tgctgtatgg cctgttgaat gtattggctg tatgttatcc gcgtttgcag
     8221 ataactgaag ctggaattct gcaacaactc ttttgcaatg ccctgccatt gcgttgctac
     8281 aaaattgtaa ctaacacttg ggtgcagcct ccgatacatt tttccaccgg taaagttgag
     8341 aggtaattgc aacccggcgg cgactttggt ttcattccag tccaacgaac tatctgcatt
     8401 taataccctg ctcctgctcc aggtttgatt tacatctgcg aaaggttgaa cgtaccaacc
     8461 gccataaatt ccagtgtagc cgacgcggtg aaaatgttca tccctgttat atgtataata
     8521 taactgactt tgaaacgtat ttaacacgtt ttgaccgtac aggatgaatg aataatccgg
     8581 atcgctgaaa tatggattcc agctatgaaa attaaaaaga ccggaagctt tcgaatattt
     8641 agaggctttc aaatcgcgtt cagaaacatt ttgaagcagg ctgttatccg ctctctgaaa
     8701 tggcttgaaa acatagagat cctttagcgt gtcgccactg gttatcggtt gccaggccgg
     8761 ggataacgag gcaagccggt atccgtcagc cgtgaaaaca gaaccgatca atttatcgtt
     8821 tgacatactt gcctggtata aaccggtcgc agcggaagcg acgcgatagg ttttctgttg
     8881 tgaattgata taagcccagc tttcatcgaa tccattgtta gaacatgaga aaaacaaagt
     8941 gtccccatct acaaccggaa aaccaacgat cctgtttgaa tacggcatga tctgaatgag
     9001 actgccaccg tcgacacttc cttttaagat gctcatctca cccttcgcgt ttctgtcgca
     9061 gacatagatg gatttatcgt cggcagaaaa cttaggatat gagtaagtat gatccgcaga
     9121 attttcaaaa gatctaatca gttccccgga aattcggatt agatgtatga acgatctctg
     9181 cgccgaacta ttttcgataa caacgatctg ttgtccatca tgtgaaatgt cgggtgcgaa
     9241 aaatttagga cgaatgccgt gatcgcttac ggcaggaaca aatttccttt cccgccccga
     9301 aggcacatca acgaccctga tctcgccaaa ctccctgtta ccccaacgtg ggtcgggttt
     9361 aaaggatgca tatacgatct tcccattatt ataagaaaaa taatcgtcgg tgcaaatact
     9421 ttgtgtcgct atctttttga tgctaccatc cgcctccctc acaacaaatc ccgggttgtc
     9481 cctaaagcca tcctgcaaca taataaccga accatccgct gcagcataag gatatttttc
     9541 atcgaccaca ttatttgttt gtgtcgaatc aaggaattgc aaaccaggta ttgtttggcc
     9601 ggtccattgt tggttgtaga aactgaatgc attctgaaca aactgatcaa aggaaacgtt
     9661 cgaatatttt ttgactgcat gttgcatcgg gtaaaacaat ggatgaaaag aggccgcatc
     9721 atgtgtgaca tttttccaaa aatcgtcgcc atatttctcc ctgccatatg caacgagcat
     9781 atatcctaaa ggataatgat cgggaacata atctttcaat gaaccgttcc tcaatttcat
     9841 ataactgtat cgcttgtttt ccaaatacag gctcttatac gaattcagga acaacggcag
     9901 ccttcctctg ccctgct
//
LOCUS       DASQJI010000293        12599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_185964,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000293 DASQJI010000000
VERSION     DASQJI010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12599
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185964"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1345..3399
                     /locus_tag="VEV83_08185"
     CDS             1345..3399
                     /locus_tag="VEV83_08185"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HYK45131.1"
                     /translation="MEAFYTTIALITAGVSLFAGLVNLFIGFHKEGEKVDVLFGSMCL
                     AMFIFFMIPPAGFILHDQAPYGLQIDIKRIFNNSFNLLFPWFVFLYTGRKKKLMPCII
                     SLTVVVAYVLMVLTRTDTQKPLWTWAVVFALTLNVCYGYYSGFAQLRLDEKGKAKWFI
                     TAMHFFALFYLLTVINQLTQNYFGNILGTKLFFPINLFPVSFIVIIGIRLRADALEKY
                     KLEKILRSQDIRWDWLVQNMQLLIVEVDSGGIIKYLNPYAVKTLGYVGQDELLGRSWF
                     DTAIPKDEAADRKAKFIDVIKEGKLMPHLMNDVVTKNGSRLIINWTNIFVYNDNIQIT
                     GAMSIGVNITEQEKAFQEIRTLKIELEKESLNENRNLPVAQEPNIIGESEAIMYAIQK
                     ANQVAPTNATVLLEGETGVGKELFANLIHERSYRKEKPFIKLNCAALPPELIESELFG
                     HEKGSFTGATQARKGRFELADGGTIFLDEISELPVSLQPKLLRVLQSGEFERLGAQQT
                     FKVDVRVISATNRDLLKEVGESRFREDLYYRLNVFPITVPPLRNRQEDIPLLVAHFVR
                     LFSEQQAKNVQNISKADMMRFKQYSWPGNVRELMNVIERSMISTTGSTLKLEWLNQSV
                     PPEPTIYFSMEEVERAHILKILRESKWKINGDDGAANKLGLHPNTLRSRLKRLNITRA
                     EP"
     gene            3907..4185
                     /locus_tag="VEV83_08190"
     CDS             3907..4185
                     /locus_tag="VEV83_08190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45132.1"
                     /translation="MYYLKLSGFIPENKEKEFEQTYKLVSTQMPNSCKQHSISKDLSH
                     QHVYHFVSYWSSSGEMDSFCISSDFTILIGAFKTLGELYDNARGQLTS"
     gene            4302..5156
                     /locus_tag="VEV83_08195"
     CDS             4302..5156
                     /locus_tag="VEV83_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45133.1"
                     /translation="MLITQNQPAAPIFPKEAIYEQLERIFSHSSFATSDILKRFLSFV
                     VDETLAGHSNTIKEYTIGTQVLNKAIDFTPQHDAIVRIHAGRLRRALNHYYKSTANGD
                     PVYIAIPKGSYVPVFTTREAAVHEDEDRRHDVFTLHSKKHVVLGVIPFSHFETDPLRI
                     GFAHGLGVQLSTELSHQNFSMVSYFTMSRIAKKIVDIREIAPAVGAHFVFTGDIQYQE
                     DNCRVNIQLINADTNQQLWGETYQRKFNPVNVFGLQDQIVRKVIAAVAKPHTIDEKPA
                     RISMATVA"
     gene            complement(5200..5436)
                     /locus_tag="VEV83_08200"
     CDS             complement(5200..5436)
                     /locus_tag="VEV83_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45134.1"
                     /translation="MESVNAHLALIKEKFQNLSGKIQELYDTDPDFQSLCADYFLCMK
                     FLNRHEKQSGLLQEYVELSQVLETDIYMFVSQAY"
     gene            5609..6109
                     /locus_tag="VEV83_08205"
     CDS             5609..6109
                     /locus_tag="VEV83_08205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45135.1"
                     /translation="MKKWLTPLCLFLFFSASAQLTTDDVNLIQSMYGKDKRDLMQEYL
                     TFKDDAQATAFWKMYDSYEAERKKLGQDFIKILEDYATNYETLTDATADKLVTRMTAN
                     NIAFENLYSKTYKQMKPVVGALKASQFLQLEAYLRSVIKTAVLDEIPFIGQIDRSHLP
                     APTKQQ"
     gene            6497..6958
                     /locus_tag="VEV83_08210"
     CDS             6497..6958
                     /locus_tag="VEV83_08210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45136.1"
                     /translation="MKKIFTSVLLTSCICFAGIAQSPVDQAVSTATNAASQVPGIGTA
                     LSNIGNGLKSSALLSSFKMPTWLSSVSKLSPSSVSGASSLLSQLGNGLNPASLMQGFS
                     VTDWASKLKSATTISSVATQAESLLQNIKPDAFKSGFDVSKVTSMLDMLKK"
     gene            7075..7518
                     /locus_tag="VEV83_08215"
     CDS             7075..7518
                     /locus_tag="VEV83_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45137.1"
                     /translation="MKKIITQALLSIALLICFTSAYSQEKAPQDRANKWTEWMKKNLQ
                     LNDDQVAKVQSINLKYATQLNDIKKDTAGGKVNWDKVKENDTKMDAELKTVFTQQQFQ
                     TYDAKKTEMKEGRKDKKDGDNTTADKKEGDKNKGNKKNADSTAHN"
     gene            7639..8037
                     /locus_tag="VEV83_08220"
     CDS             7639..8037
                     /locus_tag="VEV83_08220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45138.1"
                     /translation="MKSNTVRGILVAFLLGMVTNIYSQEKSVDARADKWTDWMKKTLT
                     LNDDQASKVQAINRNYAGKIYGAKTDKGKSKQQKSAAMKQQIAAMDGELKGVLTDAQF
                     KTYQSKRKEMMKEKREKRKGQKSAADSTSQ"
     gene            9114..9365
                     /locus_tag="VEV83_08225"
     CDS             9114..9365
                     /locus_tag="VEV83_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HYK45139.1"
                     /translation="MTNEQIERFLEQDKVAENVISINFKTRNSIRGIFINAADFHELK
                     SKNFWRIVREANIDNWKKTKDLDLARIFNGSEITKLSVV"
     gene            complement(9380..10966)
                     /locus_tag="VEV83_08230"
     CDS             complement(9380..10966)
                     /locus_tag="VEV83_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45140.1"
                     /translation="MAKLKIGVIDLVSKGPNNTLWARIMHANLASIMPTVVASWCEQE
                     GHDVRMICYTGSEELNNDLPQDVDVVFICSFTQAALLAYALSNYFRKKGAVTVLGGPH
                     ARCYPDDSIKYFDYVLGFTDRSTIVEVLRNVAPQQKEGIFLSAAKQPLQLPGVVQRWK
                     FIEPTLKKAPFLKIVPMIGSMGCPYTCSFCIDSVVPYQALDFETIQNDLRFLLTKFKK
                     PVVVWHDPNFGVRFEENMNAIASAAPAKSFRFIAESSLSILNEKHLVEMQKNGFEAML
                     PGIESWYELGNKSRTAHMGGEEKLQRVSKHINQIFNYIPYVQTNFVLGLDSDEGDEPF
                     ELTKKFVDLTPAAFPGYSLLSAFGEAAPQNLEYQKTNRVLPFPFHFLNNHLAMNVKPK
                     NYEWIEFYDKVISLTSYSFSKKALYRRFKATPNFTSRWMNFMRAISSEGYGRLKFYHQ
                     VRKNLVEDKNFRKYFEGESVKLPEFYTNIIKSTLGKWWEWLPNGAVEHNPNAYLEKHL
                     KRNSAATVGSNAGRSSLRST"
     gene            11338..12060
                     /locus_tag="VEV83_08235"
     CDS             11338..12060
                     /locus_tag="VEV83_08235"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK45141.1"
                     /translation="MRIGRTGKRFGILLGLFIWSSQGHGQVLIALLFGEKLNTGKLEF
                     GLTGGLNLANISNIPDAKSRAGLNLALFFNIKLNDNLYIHPEAMPKYPTGVSKLKPYS
                     LNNPGLDSLLSSGDVTRKIKNIAVPILIRYRLKGQLFAEAGPQIGLRTKAKDIFESGD
                     LTYENDIENNITRFDFGFALGLAQRLRKEPGAMALGIRYYFGVTDTDKFSEGSQKNSV
                     WQINLSIPVGAGKQKEKTQANN"
     gene            12121..>12599
                     /locus_tag="VEV83_08240"
     CDS             12121..>12599
                     /locus_tag="VEV83_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45142.1"
                     /translation="MKYKFTICILFAVTLFITANAQDTSAVNKPPTDSLSQQMDFIDL
                     IKKIFPPKKVDTTKKAGSVTILPAIGYNPSIGFLLGINFLKAFYMGDPATTKLSVGQL
                     DFSYTTKQLLITRFRTNIFTKDNKWNLQGNWQYTRNYVNDYGLGADARRDPPVSYPIR
                     "
BASE COUNT         3737 a         2688 c         2740 g         3434 t
ORIGIN      
        1 tttttctcct ggtccagctt cgcatccttg aaaacataat acaccgactg cagcgacgct
       61 ttgaagagac tgatgtactg caaagcgcgt tctctccttt taaacgctgc cccgagcgag
      121 aaagttagcg ggaacgctat ccaaggataa gaaagtcaag ataaaggctt acgtgaaaat
      181 aaaggcaata tgctgacgac gccgctgaaa gcaccgcaac aattaaagtt cgaagattga
      241 aaatggataa atattttctc atccgtcaaa agtttgattg catcaatgcg ctgagcgatt
      301 caaatttagt gagattaatt gcccatcctg ttatgcctgt cgtataagcc gaagaatatc
      361 cgttgtgtgc gcaacgaaaa aattttactc aaatataaaa ttatgcgtca aacgatacga
      421 atgcaccaac tcttatttat acgggttggt attcgcgcca accgtcttcg ctagttagct
      481 tcactgtccg ggctgtatgc tttccgatac acggaggtca taatgcccgc cggtgatcat
      541 acacctcgtt ttgtttcgtg taattaatcc agtcgtttat caattcttcc cttacttgag
      601 gaaattttgc agacaaatca gtggtttcac cggggtcctt ttcaagatcg taaagctgcc
      661 attgtcctgt ggcgaaagga attggcagcc gaaatatctt ccactttctt ttatgtacgc
      721 cttcatctca aaaagctcgt aacccattcc atcgtttgaa tgaatggtgg cggagtcgcc
      781 ccggggatcg ttacaacctg gtcgctcaga tggccggata accagggagg ttttgaccgt
      841 gcaatgcagg atagttcaac tcttgcatga tgccgaggcc cgcaacgtgg ttgtcattcg
      901 ttaagcagcg aggatcgtgt tggggaacaa agttggctga acgtggaaat ctgaaaacag
      961 cagccttctt tcgcggagtt tatcgggtac aggcgtttct atgttacccc agaatcggcc
     1021 tatatcacta tatccggggt catcggaaac gataggaatt cggtttaata ttaaatggtt
     1081 tttgtaaaca aaaatttggt tttgttaccg aaatggattt agatttgttt aaatttaaag
     1141 caaaatattt aaacaatcat caaaaggggt aatgagcttc tcttaaagat aatcgtttta
     1201 atggtaagag gcggctattt atccctacat ttggctaaaa ttacagtttc ttttcggcca
     1261 attagcccgt cgcaggttta acggtaaaag ctatcatcac tcgccgacaa gttttagaca
     1321 aacgcactcc gctgaactaa cattatggaa gcattctaca caaccattgc tctaattaca
     1381 gccggagttt ctctttttgc aggccttgta aatttgttca ttgggtttca taaggaaggg
     1441 gaaaaagttg atgtactatt cgggagcatg tgcttggcca tgttcatttt ttttatgatc
     1501 ccccctgcgg gtttcatact tcacgaccag gctccttacg gcttacaaat cgatatcaaa
     1561 cgcattttca ataattcttt taatcttctg tttccctggt ttgtttttct ttataccggc
     1621 cgtaagaaga agctgatgcc gtgcataatt tctctaactg tcgtcgttgc ttacgtgctt
     1681 atggtcctca cgagaaccga cacccaaaaa ccactgtgga cctgggctgt ggttttcgct
     1741 cttacactga acgtttgtta cggttactac agcggttttg cgcagctcag actcgacgaa
     1801 aagggcaagg ccaaatggtt tatcacagca atgcatttct tcgccctttt ttacctgttg
     1861 acggtgataa accaactcac tcaaaattat ttcgggaaca tcctgggcac caagcttttt
     1921 ttccccataa atctttttcc tgtttcattc atagtgatca tcggcattcg cctgcgcgcg
     1981 gatgctcttg agaaatacaa gctggagaaa atattacgat cgcaggacat acgctgggat
     2041 tggctggtgc aaaacatgca attgcttatt gtggaggtcg atagcggcgg gataatcaaa
     2101 tatttgaacc catatgctgt taaaacgctt ggatatgttg gacaggatga gttgcttgga
     2161 cgaagctggt tcgatacagc gataccgaaa gacgaagccg cagacagaaa agcaaagttt
     2221 atcgatgtga taaaggaagg caagttgatg ccgcatttga tgaatgacgt tgtcacaaaa
     2281 aacgggagtc ggctcattat taactggacg aacatttttg tctacaatga taatatccag
     2341 ataacgggtg cgatgagtat tggcgtgaac attaccgaac aggagaaggc gttccaggaa
     2401 atacggacgc tgaagatcga gttggaaaaa gaatcgttga atgaaaaccg aaatcttcct
     2461 gttgcgcagg agccaaacat aatcggcgaa agcgaggcta taatgtatgc gatccaaaaa
     2521 gctaatcaag ttgcgcccac caatgctact gtattgcttg agggcgaaac cggcgtggga
     2581 aaggagttat tcgcaaacct tatacatgaa cgtagctatc ggaaggaaaa gccatttata
     2641 aaacttaatt gcgctgcgct gccgccggaa ttgattgaga gcgaattatt cggacatgaa
     2701 aaaggttcat tcaccggcgc cacccaggcg agaaaaggca ggttcgagct cgccgatggc
     2761 ggcactattt ttctcgacga aataagcgaa ctgcccgtct cacttcagcc gaaactgtta
     2821 cgcgttctgc agagcggaga gttcgaacgg ctcggagcac agcaaacatt taaagtggat
     2881 gtgagggtga tttcggcaac caatcgggat cttttaaaag aagtcgggga atcgcggttc
     2941 cgtgaggatt tgtactatcg tttgaacgtg tttcctataa ccgtaccgcc gttgagaaac
     3001 cggcaggaag atataccact gcttgttgcc cacttcgtga ggctattttc agaacaacag
     3061 gcaaaaaatg ttcaaaatat ttccaaagcc gatatgatgc ggtttaagca atactcgtgg
     3121 ccgggaaacg tgagggagct gatgaatgta atagagcgat cgatgatctc taccaccggc
     3181 agcaccctga agctcgaatg gctaaaccag tctgttcctc ctgaacccac gatctatttt
     3241 tcgatggaag aagttgaaag ggcacacatt ttaaaaatcc tccgtgaatc gaaatggaag
     3301 atcaacggtg acgatggcgc tgcaaataaa ctcggcctgc atcccaacac gcttcgttcc
     3361 cggttgaaga gacttaatat tacgagagcg gaaccgtgag gaagagttag gatttacgat
     3421 tgcagatttc agattgcaga tttcggattt tcgaggcata gttaggcata cgtccgcact
     3481 tagttcacgg ctttcgcaaa atggctcttg ccttttggct cttttttttg gttcttgaga
     3541 tttgcttctt gatttttggt tcttgagatt tggttcttga gattggttct tgttatttgg
     3601 ttcttgacat ttggttcttg tcctttggtt cttgagtctt ggctcctgat ttttgtctct
     3661 tgttatttgc ttcttgctat ttttgccttt tacaacaaaa ctcactcacg gtatttcgtg
     3721 acttgctttc tttttcgtga tttggtggag ggcttggttg aaagtgaagc cgccgcacgt
     3781 agttgagttt ctattcagca tcaatctctt ataaaatatt taagcaagga cttttaggtg
     3841 gcacgcatgt tgaattaatg aattcggtta ttgcggatta tttcagtggc ccaaccgaac
     3901 ttgcttatgt attatttgaa gttgtcagga tttattccgg agaataaaga aaaggagttt
     3961 gaacaaacgt acaaactggt gagcactcaa atgccgaaca gttgtaaaca gcacagcatt
     4021 tcaaaggatt tgtcacatca gcatgtttat cactttgtct cgtactggtc gtcgtcaggc
     4081 gagatggatt cgttttgcat ttcgtcggac tttacaatat tgatcggcgc tttcaaaaca
     4141 ctcggagaac tgtacgacaa cgcgagaggt caactaacaa gctaggtcaa atattgtaga
     4201 ttcagtgttg gctcgaaaat gccaagagac cacaaaccct gataaaaatc actcaacgct
     4261 aatcgcctgt ggaagacatt tgctcacaac aaacaacatt tatgctcatt actcagaatc
     4321 agcctgctgc accaatcttt ccaaaagaag cgatctacga acaactggaa cgaatatttt
     4381 ctcattcgtc cttcgccaca tcagacattc tcaaacgatt tctttccttt gtcgtggatg
     4441 aaaccctggc cggtcattca aacaccataa aggaatatac tatcggcacc caggtgttga
     4501 ataaggccat cgactttaca ccacagcacg atgccatcgt gaggattcac gcgggcagac
     4561 taagacgcgc attgaatcac tattacaaat caacggcaaa tggcgaccct gtctatatag
     4621 ctattccaaa aggtagctat gtgccggtct ttacgaccag ggaagccgcc gtgcatgaag
     4681 acgaggatcg gcgccatgac gtttttacat tgcattcaaa gaaacacgtg gtgctcgggg
     4741 tgatcccatt ctcgcatttt gaaacggacc cgctaagaat cgggttcgca catgggttgg
     4801 gcgttcaatt aagcacggaa ctatcacacc aaaatttttc gatggtctcg tattttacaa
     4861 tgtcaaggat cgcaaagaag atcgtcgaca tcagggagat cgcgcctgca gtcggtgcac
     4921 attttgtatt tacgggcgac atacaatacc aggaagataa ttgccgtgta aatatccagt
     4981 tgatcaatgc tgatacaaac caacagctat ggggagaaac ataccagcga aaatttaacc
     5041 cggttaacgt gtttggcctg caagatcaga tcgtgagaaa agttattgcc gctgttgcga
     5101 agccgcacac catcgatgaa aagccggccc gaatttcaat ggcgactgtt gcatgatcaa
     5161 acactacact gatctctttg ttcgtggcag caaaaggaat taatacgcct gcgacacaaa
     5221 catgtatata tccgtttcga gcacctggct gagctcaacg tactcctgca acaaaccgga
     5281 ttgcttttcg tgcctgttta aaaatttcat gcacaggaaa taatccgcgc acaacgattg
     5341 aaagtccgga tcagtgtcat acagttcctg gatctttcca ctgaggtttt ggaatttttc
     5401 ctttatcaat gcgagatgtg cattcactga ctccattcat gtgctgtttg aaaagtcttc
     5461 ataataaaat taaacgttgc tacggcatga agatgcggat gtgatgattt aaccgttaac
     5521 cacgttcgtt gaatacctgc atttcacttt aagaatttac tttgcaggaa catttcattt
     5581 ctcattgtaa attctaaaaa tcattgttat gaaaaaatgg ctcacacctc tttgcttatt
     5641 cctgtttttt tccgcatccg cgcagctaac taccgacgat gttaacctga tccagtcgat
     5701 gtatggaaaa gataagagag acctgatgca ggaatacctg acatttaaag acgatgcaca
     5761 ggctactgca ttctggaaaa tgtacgacag ttatgaagca gaaagaaaaa aactgggaca
     5821 ggactttata aaaattcttg aagattatgc aaccaactat gaaacactta ctgacgcaac
     5881 ggccgataaa ctggtcacaa gaatgaccgc caacaatatc gcgtttgaaa atttgtatag
     5941 caaaacatat aagcaaatga agccggttgt gggtgcattg aaggcaagcc agtttttgca
     6001 gcttgaggct tacttgagaa gtgtgataaa gacggctgtc ctcgacgaga ttcctttcat
     6061 tggccagatc gacaggtcac atttacctgc gccaacaaaa caacagtaaa cgccggctga
     6121 caaaaactaa tgttgcaggg tttgagttgt tgaccgaaat ccaatgtcca aaagttttgt
     6181 tgttgataag gaaatatccc ggtaaggata tttcagcctg ccgggtctaa ccctggcagg
     6241 ttttagtcgt gaggttttct gacgcagacc gttttacggt taatcgacga gaaagactac
     6301 ctgcatctgc gttttattgt agctttattg tcaccaaaga aggtaaagtt cgcaatggtg
     6361 aaacgctgca gatgatgagc aaacgacgaa caacctcttg gaagataccg ttagcactcc
     6421 gccctcctat gtaatttttt ttgaccgttc gcccttttgg tgatcgacat atttcttatc
     6481 aaaaaaatta tgtaacatga agaaaatttt tacttcggtt cttttgacgt cctgcatttg
     6541 ctttgcaggt atcgcacaga gcccggtaga ccaggccgtt tctaccgcaa caaatgcagc
     6601 ttcacaagtt cctggtatag gtaccgcgtt gagcaacatc ggcaatggtc ttaaatccag
     6661 cgcgctgctc tcttcattca aaatgcccac atggctcagc agtgtttcta aattgagtcc
     6721 ctccagtgtt tcaggagctt catctttatt aagtcaattg ggaaatggct taaaccctgc
     6781 ttcccttatg cagggatttt cagtgacgga ctgggcatct aaactaaaat ctgcaacgac
     6841 catctcctcc gttgctacgc aggcggaatc acttctgcaa aacatcaaac cagatgcgtt
     6901 caagagtggc ttcgacgtaa gcaaggtcac ttcgatgctc gatatgctaa agaagtaaat
     6961 cttattcagg taagattttg cccgctccgc tcgcagcaca catcgaactt accaaaatag
     7021 cacagcgaac gttctgacgc tataaaccaa atctcataaa ataaatttcc agccatgaaa
     7081 aaaattatca cccaggcatt attatcgatc gcgctgttga tttgttttac cagcgcctat
     7141 tcccaggaaa aagcacccca ggatcgcgca aacaaatgga ccgaatggat gaaaaagaat
     7201 ctacaactca acgatgacca ggtcgcgaaa gtgcagtcga tcaatttgaa gtacgcaacc
     7261 cagttgaacg acatcaaaaa agatactgca ggcgggaagg tcaactggga taaggtgaag
     7321 gaaaatgaca ctaaaatgga tgccgagctg aagacagttt ttacccagca acagtttcaa
     7381 acgtatgacg ccaaaaaaac ggagatgaaa gaaggaagga aagacaaaaa agacggagat
     7441 aacacaacgg cagataaaaa agaaggcgat aagaacaaag gcaataaaaa gaacgccgat
     7501 tccaccgcgc ataattaaag gggaacaggt aagttaataa ttacctaagc atcgttccgt
     7561 agaagcgcgc cttcggccga tccaaaatgc ggaccgcccg aaattaaata tcataagtac
     7621 gattaaactt taccactcat gaaaagcaac acagtacggg gaatactggt ggcattcctg
     7681 cttgggatgg ttacaaatat ctattcgcag gaaaaatccg tcgatgcaag agcggacaaa
     7741 tggacggact ggatgaaaaa aactttaacg ctaaatgatg accaggcttc gaaagtgcag
     7801 gcgataaacc ggaactatgc gggcaaaatt tatggtgcca aaaccgacaa agggaaatcc
     7861 aaacaacaaa aatctgcggc tatgaaacaa cagatagctg ccatggacgg agaactgaaa
     7921 ggagtgctca ccgacgcgca gtttaagacc tatcagtcaa agagaaagga aatgatgaaa
     7981 gaaaaaagag aaaaacgaaa agggcaaaag agcgctgccg attcaacgag ccagtaactt
     8041 cgttctcttt gtcgcgcagc agcaaaaaat attttcagga aataatcccc agcatatgct
     8101 ccggtctcaa tcggttaatt cttcgaacaa agaaaccgcg aacttcgtgc ggcttatttg
     8161 gggcttatct tatcttcatt ctcgttaaca gccgcttttg tatttccagg tacacattgt
     8221 ggcttttgtt atgctttgct aaccgatctt atttagagac acatttttta gtggaaatac
     8281 agcccttccg tgtgtacgga gggcttcttt tttaaaaggg taccgaaagg gttatcgccc
     8341 agccgcatca tcccggagcc aggcaacaaa aaacttatcc agccaataaa ctaagttgtg
     8401 tccggtcacg tatagataaa ggctggccgt gatcgaaaag agatacttaa catacattat
     8461 caccttcgaa aaacatcgta tgcaccgcac aaaagaaaca aggacccatg tcatttccca
     8521 caaaaaaata aaggggcaat atcttatcaa aagaatgaaa gccccctgca ttgatatctt
     8581 atacaacgcg agcgaaaaca gaggcgtcat gttttcaaga ggctgcggtg ttgttggatc
     8641 aaaaatttat tccgaaacgg agattgacgc tgcgtttaga aaggcggttg cctgggccag
     8701 gaacaccatc agcaattaat aagtcaattt tatgccgtga acgagaaaag taaacgccga
     8761 cggttttaaa tccctcgggc tttcttgaat aaggtataaa aatgtcgcat caacctggca
     8821 ggttttgatt gagacaacag caagctccca taactggtaa gctaaagccg gaaaattgag
     8881 cgtctccttc ctcgatggat ctgttattag tcgtgggctc aaccttcggc ttagatgctc
     8941 tacgagcgtt acgccctatg accgttcttc ataagcggct gcgtactacg gttgcaagcg
     9001 tgtttctctt ctctaataaa aattttaatt cgaccttgaa gtctcataat caagcatcgc
     9061 aatcgttgaa aaccgatatg ctattatcat taccttcgcc gcaaatttta gttatgacaa
     9121 atgaacaaat cgaaagattt ttggaacagg acaaagttgc tgaaaatgtg atttccatca
     9181 atttcaaaac aaggaacagt atacgcggga tctttattaa cgctgctgat tttcatgaat
     9241 tgaaatctaa aaatttctgg cgcattgtga gggaagcaaa tattgataac tggaaaaaga
     9301 caaaagacct ggacctcgcg cgtattttta atgggtcaga aattacaaaa ctctctgtgg
     9361 tgtaactgca aaatcctcac tacgttgaac gtaatgaact gcgccccgca ttagatccaa
     9421 cagtggcagc gctatttcgt tttaaatgtt tttcaagata agcgttcgga ttatgttcta
     9481 ccgctccgtt gggtaaccat tcccaccatt tcccgagggt acttttaatg atgttggtgt
     9541 aaaactccgg aagctttaca gattctcctt caaagtattt acgaaaattt ttatcctcaa
     9601 caaggttctt ccggacttga tgataaaatt ttaaacggcc atatccttca gaagaaattg
     9661 ccctcataaa gttcatccac cgcgacgtga agttaggagt ggctttaaag cgacgataca
     9721 gtgccttttt tgaaaacgaa taggacgtga ggcttattac tttatcataa aattcgatcc
     9781 attcataatt tttgggcttc acgttcatcg ccaggtgatt attaagaaaa tggaaaggga
     9841 atggcaaaac cctgtttgtt ttttgatatt cgaggttttg cggcgctgct tctccgaaag
     9901 cacttaacag cgaataaccc ggaaatgcgg cgggcgtaag atcaacaaat tttttcgtca
     9961 attcaaaagg ctcgtctcct tcatcactat ccaatcccaa tacaaaattt gtttgaacat
    10021 agggaatgta attaaatatc tggttgatgt gtttcgaaac tctttgcaat ttttcttcac
    10081 cacccatatg tgcagtacgc gacttattgc ccagttcgta ccatgattca atgcccggca
    10141 acatagcttc aaaaccattt ttctgcatct cgaccaggtg tttttcattt aggatcgaca
    10201 agctgctttc tgcaataaat cggaaacttt tcgcgggagc cgctgacgcg atcgcgttca
    10261 tattttcttc aaatcgaact ccgaaattgg gatcatgcca cacaaccacc ggctttttaa
    10321 attttgtaag caaaaagcgg agatcgtttt gaatcgtttc aaaatcgagc gcctggtatg
    10381 gtacaacgga gtcgatacaa aaggaacagg tataaggaca acccatgctt ccgatcattg
    10441 gcacgatctt aagaaatggt gcttttttta acgtcggttc aatgaacttc cagcgctgga
    10501 caacgcccgg caattgcaaa ggttgcttag ctgcggaaag aaatattccc tctttttgtt
    10561 ggggagcaac gttgcgcagt acttccacaa ttgtcgatcg atcggtaaac cccaatacat
    10621 aatcgaagta ttttattgaa tcgtcaggat aacatcgtgc atggggtccc cccaaaacag
    10681 ttactgctcc tttttttctg aagtaattac tcagcgcata cgccaataaa gcggcctgcg
    10741 tgaaagaaca aataaaaacg acatcaacat cctgtggcaa gtcgttattc aattcttccg
    10801 atccggtata acagatcatc cttacatcat gcccttcctg ctcgcaccag ctagcgacaa
    10861 ccgttggcat tatgcttgcc aggttcgcat gcattatcct tgcccataaa gtattgttcg
    10921 ggcccttact tacaaggtct attacaccta tcttgagttt tgccataatt gagcatgtct
    10981 tatctccctc catattaaaa ttgacacgga ggtcgacaga aataaggaaa taaaaaattg
    11041 tgaaaatgga agttatttat ttttcatcaa acaggcgtca ttggcctgtt ttagaaaaac
    11101 aaagcttgct gatagtaaac cgacagcctg acgaaaatat actttcgacg cgaatccgaa
    11161 tgtttaattt ttcaatgtag gtgcccacac acattcgcct tttcacttcg gtgtttgggt
    11221 tgatcacgaa cagaagtgta gttgacgtgt cacacacttt taaagtgtct gacgctgccc
    11281 atttaaccgt ttcatggagc gcatgtaata cttattgcct attttcccgt ttaaactatg
    11341 cggatcggaa ggacaggaaa aaggtttggt attttgttgg ggctatttat ctggtcatca
    11401 caaggtcatg ggcaggtgct gatcgcgctg ctgtttggcg aaaaacttaa tacaggcaaa
    11461 cttgaatttg gattgacagg tggattgaac cttgcaaata tttctaacat tccggatgca
    11521 aaaagcaggg caggtttgaa cctcgcactt ttctttaaca tcaagctgaa cgataactta
    11581 tatattcatc ctgaagccat gcctaaatat ccaactggcg tttctaaatt aaaaccttac
    11641 tcgctgaata atccaggtct cgatagtttg ttaagcagcg gagatgttac gcggaagatc
    11701 aagaacatcg cggtgccgat attgataaga taccggctga aggggcagtt gtttgccgag
    11761 gctggccctc aaataggttt acgaacgaag gcaaaagata tttttgaatc gggcgacctg
    11821 acttacgaga acgatattga aaataatatt acgcggtttg attttggttt tgcgttaggg
    11881 cttgctcaaa ggttgcgaaa agagcccggc gcaatggccc ttggtattcg ttactatttt
    11941 ggggtaaccg atacagataa atttagcgag ggatcgcaga agaatagcgt ttggcaaatc
    12001 aacctgagca ttcctgtcgg tgcaggaaag caaaaagaaa agacacaggc aaacaattaa
    12061 agacagtaat agttacggta gcggagccag atatcgagca ctatttttaa aacaaagatt
    12121 ttgaaataca agtttaccat atgcattctg ttcgcggtga ctctattcat cacggcaaat
    12181 gcacaagata ccagtgctgt taacaagccg ccgacggata gcttatcgca gcagatggat
    12241 tttatcgatc tgataaagaa aatctttcca ccaaaaaaag ttgacacaac caaaaaggcg
    12301 ggcagtgtga ccatattacc ggccataggc tacaacccaa gtattggttt tttgttaggg
    12361 ataaattttc tgaaggcttt ttatatgggc gacccggcaa ctacaaaact ttctgtagga
    12421 caactcgatt tttcctacac aacaaaacag cttctgataa cacgcttccg gacaaatatt
    12481 tttacgaaag ataacaaatg gaatttgcag ggcaactggc aatacacaag gaactatgta
    12541 aatgactacg ggcttggcgc cgatgcaaga agagatccac cggtaagcta tccaattcg
//
LOCUS       DASQJI010000294         2620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2796949,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000294 DASQJI010000000
VERSION     DASQJI010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796949"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VEV83_08245"
     CDS             <1..409
                     /locus_tag="VEV83_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45143.1"
                     /translation="AILISSAKTRKEIPFYLRMLLSTPVYKMVPEKVVRRSKKIQSYF
                     LGAHLTSTKKYLRSTLQDLDIQFYRWALDALRTWKNDTVPSNVIHIHGTKDNLLPLKY
                     VDADITVENGGHLMIVENAVEISACLKQIICKN"
     gene            475..1443
                     /locus_tag="VEV83_08250"
     CDS             475..1443
                     /locus_tag="VEV83_08250"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK45144.1"
                     /translation="MKIGLLVSAVLAFFSCTASAQQADTLIHKLDSLQRREDMLGNTS
                     NNIKPTAYNKNTRISFSDYFILLGSDLKQQVTAPFRLNGRDALKVGMFVGGLAVLSSI
                     DEPVQKLAVHVKDNNTVSSVSSYVTNSGGIYEAYTLVALGSYGFIFKNVKMQTTTLLA
                     TQAYLSSGTMEGIIKFIAGRQRPSYYDPSRDEAEPTFHGPFYKPANPEVNGNHLSASF
                     PSGHTTVAFAAATVFAMEYKNTPWVPIVSYSAAGLIGASRITENKHWFTDVVAGAALG
                     YLCGRQVVNNYHRYATLKSQRAKGRLSFNLGYSNGTLMPDLVYTFR"
     gene            complement(1460..2197)
                     /gene="bshB1"
                     /locus_tag="VEV83_08255"
     CDS             complement(1460..2197)
                     /gene="bshB1"
                     /locus_tag="VEV83_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HYK45145.1"
                     /translation="MKVDILAFGAHPDDVELGCSGTLIAAKAQGKITAVVDITRGELG
                     TRGTAETRDCEAANAAKIMGVHARENLTMPDGFFHDDETNVKKVIEVIRKYQPEIVLC
                     NAPEDRHPDHGRSAKLVSDAAFLAGLRKIKTSLNNEEQKEWRPSYVFHYIQDRYLKPD
                     FLFDVSDFYEQKVKAILCYKTQFSIEENANDSEPKTYISTPDFLDVIRSRAFMLGRRI
                     GVKYAEGYLSAKMIGIRTFDSFIQNPT"
     gene            2404..>2620
                     /locus_tag="VEV83_08260"
     CDS             2404..>2620
                     /locus_tag="VEV83_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HYK45146.1"
                     /translation="MEEKNRSFDFDAFAKQAAEELKAGKPMVGRDGVFTPLLKHLIEA
                     SLEGELDAHLQDTRKLQKNRRNGHGRKN"
BASE COUNT          725 a          567 c          602 g          726 t
ORIGIN      
        1 cgctatcctc atctcaagcg cgaaaacaag aaaggaaatt cctttttact tgcgaatgct
       61 gttgtccacg ccggtataca aaatggttcc tgagaaagtg gttcgccgat cgaaaaaaat
      121 tcaatcgtat ttcctgggag ctcatctaac ctctacaaaa aagtatttgc ggagcacact
      181 tcaggacctg gatattcaat tctatcgatg ggctcttgat gccctgcgca cctggaagaa
      241 cgacacagtt ccgtcaaacg tgatccatat tcacggaaca aaagacaatc tcctgccatt
      301 gaaatatgta gatgccgaca tcaccgttga gaacggcggg cacctgatga tcgttgagaa
      361 cgcggtggaa atttcagcat gtcttaaaca aatcatttgc aaaaattaat tgtaaagaat
      421 tttgctttcg gcgaggtcta aaaacaattt attggggaaa tcgttgttat cgtgatgaaa
      481 attggtttat tagtatcagc tgtactcgca tttttttcgt gcactgcatc cgctcaacaa
      541 gctgatacgc tgatccacaa gctcgacagc ctgcaaagga gagaagatat gctgggcaat
      601 acttcaaata acattaagcc aactgcatac aacaagaata cccgcatcag cttttctgac
      661 tatttcatat tgctgggaag tgatcttaaa caacaagtaa ctgcaccgtt ccgcttgaac
      721 gggcgcgatg ccttgaaggt cggcatgttc gttggcggcc ttgctgtgct aagctcaatc
      781 gacgaaccag ttcaaaagct tgccgtgcat gtgaaggata ataatactgt aagcagcgtc
      841 agcagctatg tcacaaattc cggcggcatt tatgaggcgt atacgttagt cgctttaggt
      901 tcgtatggat tcatcttcaa aaatgtaaag atgcaaacca ccacactgct tgcaacgcag
      961 gcgtatctaa gtagcggcac gatggaaggc ataataaaat ttatcgccgg caggcaaaga
     1021 ccaagttact atgatccgtc gagggacgaa gcggagccga catttcatgg accattctat
     1081 aagcccgcca atcctgaggt taatggcaat catttaagcg cttcatttcc cagcgggcac
     1141 acaactgttg catttgctgc cgctactgtc tttgcaatgg aatacaagaa cacgccttgg
     1201 gtaccgatcg tttcttacag cgctgctggt ttgatcggtg ccagccgcat tacggaaaac
     1261 aagcattggt tcactgatgt tgtggcgggc gctgctttgg gttacttatg cggaagacaa
     1321 gttgtgaaca attatcatcg ttatgcgact ttaaaatcgc aaagagcaaa ggggaggttg
     1381 tcgttcaatc tcggttattc aaacggcact ttaatgcccg acctggttta taccttcaga
     1441 taatggcaca cgctgatgat caggtgggat tttgtatgaa agaatcaaaa gttctgatcc
     1501 cgatcatctt agcactcaaa taaccttcag catattttac accgatgcgg cgcccgagca
     1561 taaatgccct tgacctgatc acatccagaa aatcgggcgt tgagatatag gttttcggct
     1621 cactgtcatt agcgttttct tcgatgctga attgagtttt gtaacagaga atagctttta
     1681 ctttctgttc gtagaagtct gaaacgtcaa aaagaaagtc tggtttgagg taacggtcct
     1741 gtatgtaatg aaatacatag ctgggccgcc actccttttg ctcttcgttg ttcaatgaag
     1801 tttttatctt tcttaggccg gcaaggaaag ccgcatccga tacaagcttt gcgctccttc
     1861 catggtccgg gtgacgatct tcaggcgcat tacacaaaac gatttccggc tgatattttc
     1921 tgatcacttc gatcaccttt ttcacattcg tttcatcgtc gtgaaagaat ccatccggca
     1981 tcgttaagtt ttcgcgtgcg tgaacgccca ttattttcgc tgcatttgca gcttcgcagt
     2041 cccttgtttc agcggtgcca cgtgttccga gttcgccgcg tgtaatgtca acaaccgctg
     2101 ttatttttcc ctgtgccttc gccgcgatca atgtaccgga acatccgagt tccacatcgt
     2161 cgggatgagc gccaaaggcg agtatatcaa ctttcatgcg ttaaaaataa agagaaaaag
     2221 tatgaggttt tgggttagtt ggtttattgg tttagtcggt gattgggatg tttcaacttt
     2281 gacgttattt gggcgagtga tgttttgtcg cgaaagttag tttgcaaatt agaaatgaaa
     2341 ccgacattga caattcacaa gagtatgttc aataaagtgt gtcaataaaa gtaaattaga
     2401 cacatggaag agaaaaacag atcttttgac tttgatgcgt ttgccaaaca agctgctgag
     2461 gaattaaaag ctggcaagcc aatggttggt cgagacggtg tatttacgcc gcttttaaaa
     2521 catctgattg aggcatcgct agagggtgaa ctggatgcac acttgcaaga cacgcgtaag
     2581 ctgcagaaga accgtcgcaa tggccatggc agaaaaaatc
//
LOCUS       DASQJI010000295         5843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2029945,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000295 DASQJI010000000
VERSION     DASQJI010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5843
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2029945"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VEV83_08265"
     CDS             complement(<1..647)
                     /locus_tag="VEV83_08265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HYK45147.1"
                     /translation="MNTITIEGQLRTETGKKATRQLRSQELVPGVIYGGAQEINFYAP
                     ARAFKALVYTSEFQLAEIKVDGKTYRCILKDLQFDKVTDALNHIDMLELVEDKKVVAD
                     LPLKFNGTAAGVKEGGKLITKMKSLKVKTLPKYLKEHIEVDINGLELNGNIRVEDVKA
                     DNMEVMNSPRIPVASVVLTRQLKQEEATIAPAATTAAPAAGATTPAAPAGKGAPAG"
     gene            complement(783..1742)
                     /locus_tag="VEV83_08270"
     CDS             complement(783..1742)
                     /locus_tag="VEV83_08270"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HYK45148.1"
                     /translation="MGPSVKIFSGTGSQALAAKITQRFGVPQGKVNIQKFSDGEFQPV
                     FLESIRGDYVFLVQSTCSPTDNLMELLLMIDGAKRASAYRIIAVIPYYGYARQDRKDK
                     PRVAIGSKLVASLLETAGANRVITMDLHAAQIQGFFDIPVDHLDSSAIFIPYIEKLHL
                     PNLTFAAPDVGSTNRVREIASYFNSEMVICDKHRKRANEIASMVVIGDVEDRDIILID
                     DIVDTGGTLAKAADLLKEKGARSVRALCTHPVLSGRAYETIENSLLEELVVCDTIPLD
                     ERRPQDKIKVLSVADLFAIAIRNAYENKSITSLFIHSQMREKV"
     gene            1870..2559
                     /gene="radC"
                     /locus_tag="VEV83_08275"
     CDS             1870..2559
                     /gene="radC"
                     /locus_tag="VEV83_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HYK45149.1"
                     /translation="MPNASIKTWAVDDRPREKMLLKGYAALSNAELLAILINNGTKQT
                     SAVEVAKQLLSAVDNDLPKLGKLSVKEIIKLKVKGIGEAKAVSIVAALELGLRRDVNE
                     KKLDVVIQSRDAAEYLRAKLKYLTYEVFAVVFLNRANKIKHYEIISEGGITGTVADPR
                     IILKKALENDAVSVILCHNHPSGSIKPSRADEDLTRKIKEAASYFDIKVLDHIIVSEE
                     GYYSFADEGLL"
     gene            complement(2583..4376)
                     /gene="argS"
                     /locus_tag="VEV83_08280"
     CDS             complement(2583..4376)
                     /gene="argS"
                     /locus_tag="VEV83_08280"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HYK45150.1"
                     /translation="MSLATDIKIIAKHAIAELYETTVDDGAITINLTKPEFEGDYTIV
                     LFNLLKLLKRSPDVLGNELGSFLILRHPEVFQSYNVIKGFLNLVVSDNYWTNFLQKNL
                     SNVDFGKLQGPSKKIMVEYSSPNTNKPLHLGHLRNIFLGWSVASILKATGNEVIKSCI
                     VNDRGIHICKSMVAWQLFANGGTPEAAGIKGDHFVGDYYVKFNDEYKKQVDELMSSGL
                     SKEAAEKQAPIMKAAQQMLVDWEAGKPDVIELWNMMNNWVYKGFDETYKRIGADFDKV
                     YYESQTYLLGKNLVDVGLQKGVFFKEEDGSVWIDLTADGLDKKIVRRKDGTAVYITQD
                     IGLAVDKYEEYKIDENIYVVGDEQNYHFKVLRLICEKMGLPSANGMYHLNYGMVELPT
                     GKMKSREGTVVDADDIVDEMMRMAQQKTEELGKVKDFNETELKELYETIGLGALKFFL
                     LRVDPKKRMVFNPEESIDFHGFTGPFVQYTYARIKSVLRKLSMVNGELSIASRKLNSA
                     LLPLEKSIIVQLEQFPVAVEEAAALHDPSKLAVYIFNLAKSFNTFYTEHSIASAETEE
                     KKYLRTMLSQLTAHVIKTAMQLLGINVPDRM"
     gene            4484..5026
                     /locus_tag="VEV83_08285"
     CDS             4484..5026
                     /locus_tag="VEV83_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HYK45151.1"
                     /translation="MQKLHAFTRSSILKVVDSFYPPFRSFMPLQMFRYAACGGANTVF
                     DILLYSFTYNFILDKKIVYIGTIAISPYIFAFLVSFCITFPTGFYLSRYVVWQQTTTR
                     KRIQLFRYFIIVMACILLNYFFLKLFIEQFNWWPTVAKIVTSFILVAFSYFTQKNFSF
                     KAADLKRGEFSFPSTEVDGN"
     gene            5178..>5843
                     /locus_tag="VEV83_08290"
     CDS             5178..>5843
                     /locus_tag="VEV83_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HYK45152.1"
                     /translation="MAVLHNRISGEELKRRLLEETEQRVTMSFYRYFPIQNPQEFRDQ
                     LYKHFHALKVFGRIYVAKEGINAQLSVPSSNFDAFKEFLFSVDGLQAVRLNIAAHHNL
                     NDPLEQGKSFWVLSVKVRDKIVADGITDPGFSMEKKGRYVTAEAMNKLLEEKDTIVID
                     MRNHYEYEVGHFENAIEIPSDTFREQLPMAVDMMKGNEQKNIIMYCTGGIRCEKASAY
                     MLHN"
BASE COUNT         1554 a         1320 c         1241 g         1728 t
ORIGIN      
        1 cccgcaggtg cgcccttgcc tgcaggtgct gccggtgtgg tggcgcccgc tgccggagcc
       61 gcggttgtgg cggccggtgc gattgtagct tcttcttgct tcaattgccg cgttaagaca
      121 acagatgcga ccgggatcct cggcgaattc atcacttcca tgttatctgc tttcacatcc
      181 tcaacacgga tattgccatt taattcgaga ccattgatgt caacctcaat atgttctttc
      241 aaatattttg gaagcgtctt taccttcagc gacttcattt ttgtgatgag ctttccgcct
      301 tcctttacac ctgcagcggt tccgttgaat tttaatggaa gatcggcaac cacttttttg
      361 tcttccacca actcaagcat gtcgatgtga ttcaaggcgt cggtcacctt atcgaattgc
      421 aggtccttta aaatacacct gtaagttttg ccatcgactt taatttctgc tagctgaaat
      481 tcactggtat aaacaagagc cttgaaagcc ctggcaggag cataaaagtt tatttcctgc
      541 gcacccccgt aaattacacc aggcacgagt tcctgagagc gaagctggcg ggtggctttt
      601 ttgcccgttt cggtcctcag ttgtccttcg attgtaattg tgttcataat aaatgtttgt
      661 gcccgactcc ttgtaaggag ttttcgggac ctattaaaaa atctgattta cacgtttgtt
      721 gatgggtcgt ttgtaagagt cggaatacaa atccttcctt cacatttcca catctgcttc
      781 attcaaacct tttccctcat ctgcgaatga ataaagaggc ttgtgatgct tttgttttcg
      841 tatgcattcc tgatcgcgat ggcaaaaagg tcagccactg aaagaacctt tattttatcc
      901 tgcgggcgcc tttcgtctag aggaatagta tcgcaaacca ctaattcttc caacagactg
      961 ttctcgatcg tttcgtatgc cctgccgctt aaaaccggat gggtacaaag agctcttacg
     1021 ctcctggctc ccttttcttt taaaagatct gcggcctttg ccaacgtacc acctgtgtca
     1081 acaatatcat cgatcaaaat aatatccctg tcttctacat cccctatcac taccatgctt
     1141 gcgatctcat tcgcacgttt gcgatgcttg tcgcaaatca ccatttctga gttaaaatag
     1201 ctggcaattt ccctgacacg attggtactt cccacgtcgg gggcggcaaa ggtaaggttt
     1261 ggcaggtgaa gtttttctat ataaggtata aaaattgccg agctgtcgag atggtcaacg
     1321 ggtatatcaa agaacccctg tatctgggca gcgtgtaaat ccattgttat cacgcggtta
     1381 gcgccagcgg tttcaagcaa cgaggccacg agtttcgaac cgattgccac ccgcggttta
     1441 tcttttctgt cctgccgggc atagccgtag tagggaatca cggcaataat tcgatatgcg
     1501 ctcgctcgct ttgcaccgtc gatcatcagc agtagttcca tcaggttatc ggtgggcgag
     1561 cacgtgcttt gcaccaggaa tacatagtcc ccgcgaatac tttccaggaa caccggctga
     1621 aattcaccgt cgctgaattt ttggatattt accttgcctt gcggcacccc aaatctttga
     1681 gtaatttttg cagcgagggc ttgagacccg gtacctgaga agatctttac tgatggaccc
     1741 atagcatata gttaggggac gaagatagaa attcaaaaaa gaattactaa tttcaattgc
     1801 gaaaattaat ttcaaccatt aaactaaaac ctgtcgcttt caactgcaca ttcattaaac
     1861 tttttttcaa tgcctaacgc ctccatcaaa acgtgggctg tcgacgaccg gccacgcgaa
     1921 aaaatgcttc tgaaaggata tgccgctttg agcaacgccg agttacttgc tatcctgata
     1981 aacaatggta ctaaacagac cagtgcagtt gaggtagcaa agcaacttct cagcgcggtt
     2041 gataacgatc tgccgaaact cggaaaacta tccgtgaaag aaattattaa actgaaggta
     2101 aaaggcattg gtgaagcaaa ggcagtttcc attgtagccg ccctggaatt gggattaagg
     2161 cgtgatgtga atgaaaagaa actggatgtg gttattcaaa gcagggacgc ggctgaatat
     2221 ttgagagcga agctgaaata cctaacctat gaagtatttg ctgttgtctt tctgaacagg
     2281 gcaaataaga taaaacatta tgaaataatc agtgaaggtg gaataacggg tacagtcgct
     2341 gatccaagaa ttattttaaa gaaagcgctc gagaatgatg cggtaagcgt tatactttgt
     2401 cacaatcatc cgagcgggag cattaagcca agccgcgccg atgaagactt aaccaggaag
     2461 ataaaagagg ctgcatctta ttttgatatt aaagtgctag atcacattat tgtgagtgag
     2521 gaaggctatt atagtttcgc agacgagggg ttgttgtgaa aacttcaaaa ggaactgcag
     2581 aactacatcc tgtcgggcac gttgattcct aatagttgca tcgcggtttt aattacgtgc
     2641 gctgttagct gcgacaacat ggtgcgcaaa tatttctttt cctccgtttc agcgcttgcg
     2701 atcgaatgct ctgtgtagaa cgtgttgaat gactttgcaa ggttaaaaat atacaccgca
     2761 agttttgaag gatcatgcaa tgcagcagcc tcttcaacag caacgggaaa ttgttccaat
     2821 tgcacgatta tacttttttc aagcggcaac agggctgaat ttaattttcg actcgcgatt
     2881 gacaattcac cattcaccat tgacaacttt cttagcacac ttttgatcct tgcatacgta
     2941 tattgaacaa aaggaccggt gaagccgtga aaatctatgc tctcttcagg gttaaagacc
     3001 attctttttt tcgggtcgac acgaagcaga aaaaatttta gggcaccgag gccgattgtt
     3061 tcatataatt ctttgagttc tgtttcgttg aagtccttca cctttccgag ttcttcggtt
     3121 ttttgttgcg ccatgcgcat catttcatca actatatcat ctgcgtccac aacggttcct
     3181 tcacggcttt tcattttccc cgttggtaat tcaaccattc cataattcaa atgatacatg
     3241 ccattggcgg acggaagtcc catcttttcg caaattagcc tgagcacttt gaaatgataa
     3301 ttctgttcat cacctactac ataaatattt tcgtcgatct tatattcttc gtatttatca
     3361 acagcgagcc cgatatcctg tgttatgtaa actgcagtac catcttttct gcgtacgatc
     3421 tttttatcga gaccatcggc agtgagatcg atccaaacac ttccatcttc ttccttgaaa
     3481 aagacccctt tttgcaatcc aacatctacc aaatttttac cgagcaggta agtttggctt
     3541 tcataataga ccttatcgaa gtctgcaccg attcgtttgt aagtttcgtc gaagcctttg
     3601 tacacccaat tgttcatcat attccaaagc tcgatcacat ccggtttgcc ggcttcccag
     3661 tcaacaagca tttgctgagc agccttcata atcggcgcct gtttttctgc tgcttccttc
     3721 gataatcctg acgacattag ttcatctacc tgctttttgt attcatcatt gaacttcaca
     3781 tagtaatcac caacaaagtg atcacccttg atgccggccg cttcgggagt tccgccgttg
     3841 gcgaacaatt gccatgcgac catgctcttg catatatgaa tgccgcggtc gtttacgatg
     3901 caacttttta tcacttcgtt gccggttgct tttaatatcg atgcaacgct ccatcccaaa
     3961 aaaatatttc tcaggtggcc aagatgtaaa ggcttattgg tgtttgggga agaatattca
     4021 accattattt ttttcgaagg gccctgcaat tttccgaaat caacattgga caaatttttc
     4081 tgtagaaaat tagtccagta gttatctgag accacaagat ttaaaaaccc tttgatcacg
     4141 ttatatgact ggaagacttc cgggtggcga aggattaaaa aacttcccag ttcattgccg
     4201 agtacatcag gtgatctttt taaaagtttc aaaaggttga acagtacgat cgtgtagtcg
     4261 ccttcaaatt ccggcttggt gagattgatc gttatcgctc catcgtcgac cgttgtttca
     4321 tataactcag ctatcgcgtg ctttgctatt atcttgatat ctgttgccag gctcattgta
     4381 aataagtaag accgcaaaaa taacgaagac ggtgcttgca aaatgttcct taaatctccc
     4441 cgggcaaacc ggcgatctgc aattacgttt accttagcgg cccatgcaaa agctccatgc
     4501 attcacgcgc agcagtattt tgaaagtggt ggatagtttt tatccgccct tcaggagctt
     4561 tatgcctttg caaatgttcc ggtatgcggc atgtggcggc gctaacacgg tcttcgacat
     4621 cctgctgtat tctttcactt acaattttat ccttgacaaa aaaattgttt acatcggcac
     4681 catcgccatc agcccctaca tatttgcatt cctcgtttcc ttttgcatca ctttcccgac
     4741 aggcttttac ctcagccgct acgtggtttg gcagcaaact actacacgaa agagaattca
     4801 attgttccgg tattttatta ttgtgatggc ctgcatattg ctgaattatt ttttcctgaa
     4861 actcttcatt gaacagttca actggtggcc caccgtcgcc aagatcgtga ccagttttat
     4921 tctggttgcg tttagttatt tcacacaaaa aaacttttcc ttcaaagcgg cagatctaaa
     4981 aaggggtgag ttttcttttc cgtcgactga agtcgacggc aattgaagtc gacggcaatt
     5041 gaagctgacg gaatagaaat tgacggaata gataaaatta attggggctt atctttgccg
     5101 cgaattttgt gccgcctgca acggcatcca taaattttta atggatcccg aaattctttg
     5161 ggactgaaat ttgttttatg gctgtattac ataaccgcat ttccggagag gaattgaagc
     5221 gccggcttct cgaagaaaca gagcaacggg tcaccatgag cttttaccgg tattttccca
     5281 tccaaaatcc acaggagttc agagatcaat tatacaagca ctttcacgct ttgaaagtat
     5341 tcggcaggat ctacgttgcg aaggaaggca tcaatgcaca attgagcgtg ccttcttcaa
     5401 atttcgatgc gtttaaagaa tttttatttt ctgtagatgg gttgcaagca gttcggctca
     5461 acattgcggc acatcataat ttgaacgacc cgctggaaca gggtaaaagc ttttgggttt
     5521 tatctgtcaa agtgcgcgat aagatcgttg ccgacgggat aacagatccc ggatttagca
     5581 tggaaaaaaa aggaagatat gtaactgctg aggcgatgaa taaattgctg gaagaaaaag
     5641 acacaatcgt gatcgacatg cgcaatcatt atgaatatga ggttgggcat tttgaaaatg
     5701 caattgaaat tccgtcagac acgttccgcg agcaactgcc gatggcagtt gacatgatga
     5761 agggcaacga acaaaaaaat attatcatgt actgcaccgg cggcatccgt tgcgagaagg
     5821 cgagcgctta catgctgcat aac
//
LOCUS       DASQJI010000296         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_646407,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000296 DASQJI010000000
VERSION     DASQJI010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646407"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VEV83_08295"
     CDS             <1..201
                     /locus_tag="VEV83_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK45153.1"
                     /translation="DNGPGIPQNIVDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGG
                     EIKMETKEGEGCEFIIQLPVIG"
     gene            201..>2119
                     /locus_tag="VEV83_08300"
     CDS             201..>2119
                     /locus_tag="VEV83_08300"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45154.1"
                     /translation="MKKSPIIKICVLNFFVTCGVLAYAQSDPVVIDSLKRVLTTQKED
                     TNRVRSLDYLSAAYAWTKPDSAIIFGQQGLALATRIHDVRGEALIKHHMGLAFWLLGD
                     YLQADKITFEALKYEESVRDTDEMINSYAIICSNKRDNGDYRTALEYSFKAYSLCKGC
                     DLFKIIIGGIYMEMNMSDSAFYYLKQAQPSSYAFWLLGRTYEETGNNEMAYQYYLRSI
                     SDALTNGTTLKNLSSVYSSLAQLFKRQNKIDSCVYYAKKAYNTANEGRYRKGMLEAAL
                     LLSTTYENSDPRQALNYYKLAAAAKDSLINLQKTTQFLNSQFNEQLQQQQAEAKRISD
                     QTRTTVYLLLIAVGFFVAIAIVLYRSNVHKQQAKTKIEKAYDELKLTQAQLIQSEKMA
                     SLGELTAGIAHEIQNPLNFVNNFTELNSELIEEMNNGSDINEVRAIANDVKRNNEKIA
                     FHGKRADAIVKGMLQHTRVSTGQKEPTNINALADEYLRLAYHGMRAKDKSFNATLKTD
                     FDDTIDNINIVSQDIGRVLLNLYNNAFYAVSKASDFAKTTSDKSVTSDSTSRKLATHS
                     SKLEANNAPYAPTVTVVTKKLNHKIEIRVRDNGPGIPQNIVDKIFQPFFTTKPTGEGT
                     GLGLSLSYDIIKAHGG"
BASE COUNT          730 a          405 c          437 g          547 t
ORIGIN      
        1 gataacggcc ccggcattcc ccaaaacatc gttgataaaa ttttccaacc cttcttcacc
       61 accaagccaa caggcgaagg aacagggctg ggtttgagtt tgagttacga catcataaaa
      121 gcgcatggcg gtgagataaa aatggaaacc aaagaaggtg aaggatgtga gtttataatt
      181 caactgccag taattggata atgaaaaaaa gcccaattat taaaatctgc gtgctaaact
      241 tctttgttac ctgtggcgtt ctggcatacg cacaaagcga tccggttgtt atcgattcat
      301 tgaaaagagt tttaactacg caaaaagaag atacaaatag agtgcggtca cttgattatt
      361 taagtgctgc atacgcatgg acaaaacctg attctgcgat aatatttgga cagcagggtt
      421 tagccttggc cactcgtata catgacgtta gaggggaagc tcttattaag catcatatgg
      481 gattggcttt ttggctatta ggcgattact tacaggcaga taagattacg ttcgaagcct
      541 taaaatacga agaatcagtg cgtgatacag atgagatgat aaatagttat gctattatct
      601 gttctaataa aagagataat ggagattatc gtacggcttt agaatatagt tttaaagcgt
      661 atagtttgtg taagggttgc gacctgttta agatcatcat cgggggaata tatatggaga
      721 tgaatatgag cgattctgct ttttattatc tcaaacaagc acagccgtcc agctacgcat
      781 tttggttatt aggtagaacc tatgaagaaa ccggaaataa cgagatggct taccagtatt
      841 accttcgaag catttcggat gcgcttacaa atggaaccac tttgaaaaat ctttctagtg
      901 tatacagcag tttagcgcaa ctatttaaaa gacaaaataa gattgattcc tgtgtctatt
      961 acgctaaaaa agcttacaat actgcaaatg aagggcggta ccgaaaaggt atgttagagg
     1021 cagcgctgtt gctatcaacc acgtatgaaa actcagatcc tcgtcaagct ttaaattatt
     1081 ataaacttgc agcggctgca aaggatagct taatcaacct gcaaaaaaca acacagtttc
     1141 ttaattctca gtttaatgaa caattacaac agcagcaagc tgaggctaag cgtataagtg
     1201 atcaaaccag aacaacagtt tatctgctat taattgcagt cggctttttt gtagcaattg
     1261 ctattgtttt atacaggagt aacgtgcata aacagcaagc aaaaacaaaa attgaaaaag
     1321 cgtacgatga attaaaactc actcaagccc aactgataca atcggaaaaa atggcttcac
     1381 ttggtgagct tactgcaggt attgcacatg aaattcaaaa ccccctaaac ttcgtgaata
     1441 attttactga gctaaatagt gagttaattg aagaaatgaa caatggaagt gacatcaacg
     1501 aagtaagagc gattgcaaac gacgtaaaaa gaaacaatga aaaaatcgca ttccacggca
     1561 aacgtgcaga tgccattgta aaagggatgc tgcaacatac acgcgtaagc acaggacaaa
     1621 aagaaccgac caatatcaat gcactcgcag atgaatatct gcgccttgct tatcacggca
     1681 tgcgtgcgaa ggataagtct tttaatgcaa cgttgaaaac tgatttcgac gatacgatcg
     1741 ataacatcaa tattgtttcg caggatattg gaagagtctt gttgaattta tacaacaatg
     1801 cattttacgc tgtgtcaaaa gcttctgact tcgctaaaac aacgtcagat aaatcagtga
     1861 catccgattc aacaagccga aagctcgcaa ctcacagttc aaagctcgaa gctaataatg
     1921 cgccttacgc ccccacggtc accgttgtca caaagaagct gaatcataaa attgaaataa
     1981 gagttagaga taacggcccc ggcattcccc aaaacatcgt tgataaaatt ttccaaccct
     2041 tcttcaccac caagccaaca ggcgaaggaa cagggctggg tttgagtttg agttacgaca
     2101 tcataaaagc gcatggcgg
//
LOCUS       DASQJI010000297         5497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1568569,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000297 DASQJI010000000
VERSION     DASQJI010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5497
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568569"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VEV83_08305"
     CDS             complement(<1..651)
                     /locus_tag="VEV83_08305"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK45155.1"
                     /translation="MDESSFPSPVYRLIRQLNAYGGLHGRGYLHALSWFSRLLATAPL
                     RWIEYFSTRKKLKDIVIDKPPIFILGYYRSGTTYLQRMFMEDSRLGYMSLFQTVFPDL
                     ILCFEKAMTPLLEWLSKLLRAENPFHNIPLSWYSAGEEDVAMTNSISSYSIQWGYLFP
                     QKMNAHLNKYVLLDGLSEPERQAWLKTYLYLIRKISCANHQKQLVLKNPPNMARIRY"
     gene            complement(661..1791)
                     /locus_tag="VEV83_08310"
     CDS             complement(661..1791)
                     /locus_tag="VEV83_08310"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK45156.1"
                     /translation="MTNTDAIKIVEVKTSARKNQFTRFPYRLYSGEKNWVPPLLITQK
                     KLFTEKNIFWKKNPHCFFLAVQNEKCVGRIAAFINRQHNNWFKVNDGFFGFLEAEDDQ
                     NIFDKLLVAAENFLKQFSCTQIIGPMNPDIHNELGVLTDGFDSPPYCMLTHNHRYYDG
                     QIKARGYSKLKDFYSYMLPISGYVPTPKMERVSAVIQKRSKITIRNPDIKNFKAELAV
                     LYEIYNDAFTDHWGFSPINKDEFMELAKDLRSIVDTRIILIAEINNEPVAFLLCLPNL
                     NELLIKMRSGKLLPFNFIKILTRKKKIKSARVITVAVKKAYQHLGIGSLLYPEIMKRG
                     IQCNYTTSELSWVAEDNHVMNHIATGLRADRYKTYRLYVKQL"
     gene            complement(1826..2926)
                     /locus_tag="VEV83_08315"
     CDS             complement(1826..2926)
                     /locus_tag="VEV83_08315"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HYK45157.1"
                     /translation="MDRAQKLTFPKTDQNDFYYQLKRRIKPLMLLNERKASILTVVQT
                     ILFPSVYIVAYCLLLKFGKSLPWFYFFYAMLGIMLPLTVLNIVHDALHHSLFKNARLN
                     HFAVYFLDLMGGNSYVWGKRHVHFHHGYTNIPGWDVDLGRKKIFRLSPTDKLRPGHRF
                     QHFYMPFVYLLFTFHWVVFRDFKDYFQKSSMFRRRTKVPGIEYAKLIFFKIFYYGYII
                     VVPFMYLHIPWHHFLYAFLLLHAFASMITLMIILPTHWDEHAEFRLPNKKGQMKENWA
                     LHQLITTNDYATKQPVINFILGGLNHHIAHHLFPSVNHNYLPAITKEVVKITKEQSLP
                     YKCFSFGGALCSHFRLLRKNGFDKNILNEDML"
     gene            3048..4367
                     /locus_tag="VEV83_08320"
     CDS             3048..4367
                     /locus_tag="VEV83_08320"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45158.1"
                     /translation="MKLLLIGPTALDFGGKPIKQRKLHLPGLTLPMLAAVTSPDIQVK
                     LVSETVEDIPFNEPWDLVGITGMGSGIVRAWQIADEFKKRKVTVVIGGIAASLGKPEW
                     TLDHADTLVTGEAEETWPVLLQDFKQGKLQKEYHMQKRPDITTLPLPRYDMMNKKKLG
                     FWRPVQATRGCPFPCSFCSIQSFFERSYRKRPVDQVLRDVKAAKRSGSKYIAFIDDNI
                     GVDWKYFEELMHALIPEKIIWMSQCSIHIADKPDMLQLAFESGCRLLSFGIESVNEKS
                     IEWVEKEFNHPKEYHDSINRIRKHGIDVSTEMIIGMDGDDDSVFQKTYDFIMGNRISV
                     PRVHILTPVPGTPLYSQMEGDGRIINRDFDSYSGGKVVFRPKNIKPDDLQKNYWKLYE
                     ALFTATGIFKRTLGSPFSMGSLMRVFVMGVNLHYRNHIKHRITPGIV"
     gene            4385..>5497
                     /locus_tag="VEV83_08325"
     CDS             4385..>5497
                     /locus_tag="VEV83_08325"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45159.1"
                     /translation="MKILFVRPPVPPHTIGLKHIMICEPLELEYAAAGLQGHELQIMD
                     MIIEKGFRKRLEKFQPDVIATSCYITGVNEVIKLCRQAKLWDRKCFTIVGGVQASQVP
                     EDFADPSVDCIVKGDGTSIMPEIIEALENGYSLENIAGLAFPVAPGEVEITAEKAYMP
                     KPDDLPFPRRDLTAHLRHRYYYLQHQPVATMKTTWGCWYKCNFCYTWRITDGHPYSRS
                     PESIVKELEQLEAKDVYIVDDIFLINKSRLRKLADLIREKNIRKKFLVYARADFISEN
                     EDVIAEWAELGLHAVFIGLEASTDAELDSMNKECSVDYNRRAIEILRRNKVDTYGSLI
                     PNPDYSEEDWKRLWQFIEETGLYYVNISPLTPQPGTV"
BASE COUNT         1631 a         1116 c         1182 g         1568 t
ORIGIN      
        1 atacctgatc ctcgccatat tcggcggatt ctttagcaca agctgtttct gatgatttgc
       61 gcaggaaatt tttctgatca aatacaaata tgttttcagc catgcctgtc tttccggctc
      121 acttaatcca tctaataaaa catatttgtt caaatgagca ttcatctttt gcggaaacag
      181 atagccccac tgtatactgt aagagcttat cgagtttgtc atcgctacgt cttcttcgcc
      241 cgccgaatac catgacagcg gaatattgtg aaaaggattc tctgctctta gtaatttgct
      301 tagccattct aacaacggcg tcatcgcttt ttcaaaacat agtataaggt ccgggaaaac
      361 agtttgaaaa agcgacatgt atccaagccg gctgtcctcc atgaacatcc gttgtaaata
      421 ggtagttccg ctgcggtaat aaccaagtat gaatatgggc ggcttgtcga taacgatgtc
      481 ttttagtttc ttgcgtgtgg aaaaatattc gatccatcgt aagggcgcag tggccagcaa
      541 cctggagaac catgacaatg catgcaggta accgcggcca tgtaatcccc cgtatgcatt
      601 tagctgcctt attaatctgt ataccggcga tggaaaactg ctttcatcca ttttcaaaca
      661 ttacaattgt ttcacataaa gcctgtatgt cttatagcga tcggcgcgta aacccgttgc
      721 gatgtggttc ataacatggt tgtcctctgc gacccacgat aattccgacg tcgtgtaatt
      781 acattgtatg cctcttttca ttatttcagg atagagcaat gagccaatgc ctaggtgctg
      841 gtacgctttc tttaccgcta ccgttatcac cctggcgctt tttattttct tttttcgggt
      901 aagtatctta ataaaattaa aaggcaataa ttttccgctc ctcatcttaa ttagtaactc
      961 gtttagattg ggcagacaaa gcaaaaacgc caccggctca ttgtttattt ctgctatcag
     1021 tattatacgc gtatcaacga tcgacctaag gtctttcgcc aattccataa actcgtcctt
     1081 attgatcgga gaaaatcccc agtgatcggt aaaggcatca ttgtaaattt cataaagcac
     1141 cgccagttcc gctttgaagt tttttatatc tggattcctg atggtgatct tgcttcgttt
     1201 ttgaatgacc gcgctcacac gctccatttt gggtgttggc acataacccg agatcggaag
     1261 catatacgag taaaaatctt tgagcttcga atacccgcgc gcttttatct gcccatcata
     1321 atatctatgg ttatgcgtga gcatacagta tggaggagaa tcaaagccgt cagtgagcac
     1381 gccgagctcg ttgtgaatat cggggttcat cgggccaatg atctgagtgc agctaaactg
     1441 ctttaagaaa ttttccgcag cgacaagaag cttgtcaaaa atattttggt catcttctgc
     1501 ttcaagaaaa ccaaaaaatc cgtcattaac cttaaaccaa ttgttgtgtt gccggtttat
     1561 aaatgcggct atacgtccta cgcacttttc attctgtacc gcaagaaaaa aacaatgcgg
     1621 atttttcttc caaaaaatat ttttttcggt gaataatttc ttttgggtta ttaataatgg
     1681 gggcacccaa tttttttccc cgctgtataa acgatatgga aaacgagtga attggttttt
     1741 ccgggctgaa gttttgactt caactatttt tatggcatca gtattagtca ttcaaaggtt
     1801 tcaaggactg taagaattac aaatgttata gcatgtcttc gtttaaaatg ttcttatcga
     1861 aaccgttctt cctcagcaat cgaaaatgcg agcaaagtgc cccgccgaaa gaaaagcatt
     1921 tatacggaag cgattgctcc ttcgttattt tcacaacttc ttttgttatt gcaggtagat
     1981 aattgtgatt aacagaagga aaaagatggt gagcgatgtg atggttcaat ccgccaagga
     2041 taaaattaat tactggctgt tttgttgcat aatcattcgt ggtgatcaac tggtgcaatg
     2101 cccagttttc tttcatttgg ccttttttat tcggcaagcg gaattctgca tgttcatccc
     2161 aatgcgttgg caatattatc atcaacgtga tcatacttgc aaaagcatgc aataataaaa
     2221 aagcataaag aaaatgatgc cagggaatat gtaaatacat gaaaggaact acgataatat
     2281 aaccgtagta aaaaatttta aagaagatca gcttggcgta ttcaattccg ggaacttttg
     2341 ttcgtcttcg gaacattgag ctcttctgaa aataatcttt aaaatctctg aacacaaccc
     2401 agtgaaaagt aaaaagcaaa tagacgaaag gcatatagaa atgttgaaac ctatgtcccg
     2461 gtcttaattt gtctgttggt gataacctga aaattttctt ccttccaaga tcaacatccc
     2521 agccagggat atttgtgtac ccgtgatgaa aatgtacatg ccgcttgccc cacacatacg
     2581 agttgccgcc catgaggtca agaaagtaaa ctgcaaaatg attgagtctg gcatttttaa
     2641 aaaggctgtg atgcagagca tcatgaacga tatttaatac tgtgagaggt aacattattc
     2701 ccaacatggc gtaaaagaaa tagaaccagg gcagggattt gccaaacttc aataacaagc
     2761 agtacgcaac aatatacaca gaaggaaata gtatcgtttg tacgacagta agaattgacg
     2821 cctttctctc attaagcagc atcaaaggtt ttattctgcg ttttaattgg taataaaagt
     2881 cgttttgatc agtttttgga aaagtcagtt tttgagctcg gtccataaaa aaaattttgg
     2941 ttgcagcttc tcctatcttc aggttatcaa gttagacaga ttaattataa aatacaattc
     3001 ctattgtata acttaatagt ttaatttggt agcatgacaa ttctctcatg aaactgctgc
     3061 ttattggacc aacggctctt gattttggcg gcaagccgat aaaacaaaga aaactccatt
     3121 tacccggact tacgctgcca atgctggctg ctgttacatc accagatatt caagtgaaac
     3181 tggtttcaga aaccgttgaa gatattccgt ttaatgaacc gtgggatctc gtgggaataa
     3241 ccggcatggg ctcaggcatc gttcgcgcgt ggcagatcgc cgacgaattt aaaaaaagaa
     3301 aagtgacagt cgtgatcggt ggcatagcgg caagccttgg caaacctgaa tggacacttg
     3361 atcatgcaga tacgcttgta acgggcgaag ctgaagaaac atggccggta cttcttcaag
     3421 attttaagca ggggaaactt cagaaagaat atcatatgca aaaacggcca gacatcacga
     3481 cactgccttt gccgcgttat gatatgatga ataaaaagaa actcggattc tggcgaccgg
     3541 tgcaagcgac gagaggttgt ccttttccgt gcagcttttg ttctattcaa tctttttttg
     3601 aaaggagcta tcgaaagcga ccggtagacc aggtgttgcg ggatgtgaaa gcggctaaac
     3661 gatctggcag taaatacatt gccttcatag atgacaacat cggtgttgac tggaaatatt
     3721 ttgaagaatt gatgcatgcg ctcattcctg aaaaaataat ttggatgagc caatgcagta
     3781 ttcatatcgc agataaaccc gatatgctgc agcttgcttt tgagagtggc tgccgtttac
     3841 tttcattcgg gattgaatcg gtaaatgaga aaagcattga atgggtagag aaagaattca
     3901 atcatccgaa agaataccac gactcgatca acaggataag aaaacatggg atcgatgttt
     3961 caaccgaaat gatcattgga atggatggtg acgatgattc tgttttccaa aagacctatg
     4021 attttatcat gggcaatcgc atatccgttc cgcgtgtgca catattgaca ccagtgccgg
     4081 gcacgccttt atattcacag atggaaggag acggccgcat catcaaccgt gatttcgaca
     4141 gctacagtgg cggcaaagta gtgttcaggc caaaaaatat caaacccgac gacctgcaaa
     4201 aaaattactg gaaattgtat gaagcgcttt ttacagccac aggtattttc aaaagaacgt
     4261 tgggaagtcc tttttcaatg ggcagcctca tgcgggtgtt tgtgatgggt gtgaatttgc
     4321 attatcgaaa tcacatcaaa catcgcataa caccgggcat tgtgtaacca tcaaaacttt
     4381 tgttatgaaa attttatttg taaggccgcc ggtgccgccg cacacgatag gattaaaaca
     4441 catcatgatc tgtgaaccgc ttgaacttga gtatgccgct gcaggcttgc aaggccatga
     4501 acttcagatc atggatatga tcatcgaaaa aggatttagg aaacgactcg aaaaatttca
     4561 accggatgtt attgcgacga gttgttatat aacaggcgtg aatgaagtaa taaaactttg
     4621 caggcaagca aaattgtggg atcgaaaatg ttttactatt gtgggcggcg tccaggcttc
     4681 acaggtgcct gaagattttg ccgacccttc tgttgattgc attgtgaaag gcgacggtac
     4741 atccataatg ccggagatta tcgaagcttt ggaaaacggt tattctctgg aaaacattgc
     4801 cggcctggcc tttccggttg cacccggcga agtggagata actgctgaaa aagcatacat
     4861 gcccaaacct gatgaccttc cttttccaag acgagaccta acagctcatc ttcgtcatag
     4921 atattattac ctccaacatc agcccgtcgc aacgatgaaa acaacatggg gctgctggta
     4981 taaatgcaac ttttgttata catggcgcat tacagatggg catccgtatt cgcgcagccc
     5041 ggaatcgatc gtaaaagaat tggagcaact cgaggcaaag gatgtgtata tagtggatga
     5101 tatctttctt atcaacaaat cgcgtttgcg aaagcttgcc gatctcatcc gcgaaaaaaa
     5161 tatccgcaaa aagtttctcg tgtatgcacg cgcagatttt atttccgaaa atgaagacgt
     5221 aattgccgaa tgggcagagc ttggtttgca cgcggttttc ataggacttg aagcgagcac
     5281 ggatgcagag cttgattcca tgaataaaga atgctcggtc gattataatc gcagggcgat
     5341 cgaaattttg agacggaaca aagtggacac ctatggttct ttgatcccga atcctgacta
     5401 cagcgaagaa gattggaaaa ggctttggca attcatagag gaaaccgggt tatactatgt
     5461 aaatatttct ccgctcacac cgcagcccgg cacggta
//
LOCUS       DASQJI010000298        24662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1415812,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000298 DASQJI010000000
VERSION     DASQJI010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 24662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24662
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415812"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VEV83_08330"
     CDS             complement(<1..185)
                     /locus_tag="VEV83_08330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HYK45160.1"
                     /translation="MNRRVYGLDIVRAVAILTVVYMHAILNLGIPALLRYSIGDGVSI
                     FFVLSGFLIGKILLNTI"
     gene            683..1729
                     /locus_tag="VEV83_08335"
     CDS             683..1729
                     /locus_tag="VEV83_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45161.1"
                     /translation="MNSNSLWGWFAAGIVGAATIFFGVRTFTKDEKVLDNSTEQQIAL
                     SQKQNPSRPLYGLNGLVKFNRVGLCDPRFIKVIDSLDIDWFRYPGGTNANYANWRTDS
                     PSLRSVQLLVKATGMKIMFDLNVLTSTLDDQMEMLETADRLGIVGDGLFELGNELNQF
                     KYEGKERFPDARAYADTCHRWIAALKKRFPKAQFAVVGENKKWKGGEDWANIQVKTNP
                     EANLIWHFYPPGKFTHNGILDTSALKVLIHEDYVKSFGTKIPPSKVWITEFNIGDHDK
                     DPKELLDTFATGQEKLAVKFTLKEFASMGIKMIGKHNIVGKNFAAVYADKKSAYLLPV
                     GRAIREFMLSQKGQ"
     gene            1981..2054
                     /locus_tag="VEV83_08340"
     tRNA            1981..2054
                     /locus_tag="VEV83_08340"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2015..2017,aa:Asp,seq:gtc)
     gene            2137..2577
                     /gene="smpB"
                     /locus_tag="VEV83_08345"
     CDS             2137..2577
                     /gene="smpB"
                     /locus_tag="VEV83_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HYK45162.1"
                     /translation="MAKEMNNRQAYFHYHIDDKYIAGIMLLGTEVKSIREGKVSFNDA
                     YCLFDKGELWLRGLYIAEYKLGTVNNHIAVHDRKLLLTQKELKRLQAKMKERGFTLIP
                     LRVFFNEKNLVKVEIGLARGKKVHDKRESIKERDVEREMKRMIK"
     gene            complement(2578..3054)
                     /locus_tag="VEV83_08350"
     CDS             complement(2578..3054)
                     /locus_tag="VEV83_08350"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYK45163.1"
                     /translation="MRKNDYSFITHWEIAAPIHDVWNSIYESADWPLWWKGVKQVTVI
                     KENDSSGVNGVRAYTWKSVLPYSLSFKMKLIEKIDEQLLRGEAFGELEGEGTWHFRRE
                     NEITKVQYNWNVKTNKAWMNYFSFILKPLFRLNHNVVMKWGAQGLAKKLNAKLISY"
     gene            3252..4766
                     /locus_tag="VEV83_08355"
     CDS             3252..4766
                     /locus_tag="VEV83_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HYK45164.1"
                     /translation="MKLKNVFLIVAISIATSLLSVWGYGTWLRDQSVNVQNDGKVPVN
                     YAGFFDKDAPTGIPDFTAAATSATPAVVHIKTKIKGGTVSSKNKNPFGDLFGDDDPFF
                     QFFGGPRVMPDQQASGSGVIVSNDGYIITNNHVIDGASDINVTLANRKSYKATVIGND
                     PNTDLAVIKIDANNLPYMLYGNSDDVKLGQWVMAVGYPLNLDVTVTAGIVSAKSRSIG
                     INKSERAVESFIQTDAAVNPGNSGGALINTNGELIGINSAIASPTGSYAGYSYAIPVN
                     IVKKAVNDLIKFGAVQRAYMGIQYPKEDMNDEQKKNMGIKDGSGVYILEVADDGAAKS
                     AGLKKGDFITKLNDVDVNSGPELQEQVSRYKPGDKISVTYVRDGKENLTTLTLKNKSG
                     NYDVVKSETAFDDMGADLVTIDKETARKNDISGGVQVKKIGTGLLKNTRIQEGFIITS
                     VDGRDVNNLDELKAIINSSHGTVRLEGIYPGYDGTYGYPLSLDSQSNGGNGYNP"
     gene            5021..6274
                     /gene="fabF"
                     /locus_tag="VEV83_08360"
     CDS             5021..6274
                     /gene="fabF"
                     /locus_tag="VEV83_08360"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HYK45165.1"
                     /translation="MIRVVITGMGAITPLGNSVKEFWDNIVAGKSAAGPITKFDASKF
                     KTQFACEVKGFNGENYFERKDLRKYDLFSQYAIAAVDEAVRDAGLDFSSFSDEQRSDF
                     GVIWASGNGGIITFEEQLKEYYRGDGVPRFSPFFVPKRIEDIAAGIISIRYQLYGPNY
                     CTVSACASSNTAIINAFDTIRLGKAVMIIAGGSEAPITPSSIGGFNAAQALSKRNDDP
                     QTASRPFDKNRDGFVLAEGAGALIIEEYEHAKKRNATVYAEIVGGGMAADAYHLTGTP
                     PDGRGAILGMTKAVKEAGLQPRDIDHVNMHATSTSQGDVSEALAIRKVFDGKKDLVVT
                     ATKSMTGHLLGAAGAAEAIITILSLKNGLIPPTINTKELDESFPPDLTVALGEPIPAK
                     IRYAMNNTFGFGGHTATSLFKKFEE"
     gene            6456..7118
                     /locus_tag="VEV83_08365"
     CDS             6456..7118
                     /locus_tag="VEV83_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HYK45166.1"
                     /translation="MFESLFKGLLLGLLLGISVGPVIFSILKQSLNNGHRGGYCFIAG
                     VSASDITLVLICNSFTRLFNTAMEHELIIGVAGSCLLIALGVYNFFFRKVQTAENGML
                     MVGNLRKRDIAGIFFSGYFMNTLNPGAFLFWFAATATITADSKQMDHPDQYRLIVFAT
                     ALALNLSGDISKVLLANRIRARLTPHNIHLINRISGAVLIVFAIVIVVTMFLRSSVSS
                     QV"
     gene            7154..7708
                     /locus_tag="VEV83_08370"
     CDS             7154..7708
                     /locus_tag="VEV83_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45167.1"
                     /translation="MNCCKLVILLLFISKLATAQDIVVLKSNRKVIETWFSGQSIELQ
                     LTNKQWIRALIHKIENDSLYLRPFVTQVLPNRWGMPYEDTTFYGALTIATNEIYAFPK
                     PEESFPYVRNGFIFQVGGAGYLVLNLINTLRDDAPYFGEDNLPNVLIATGVFAVGTLL
                     HITHKSTLVLGKKYHVEYISSKPS"
     gene            7723..8448
                     /gene="mtgA"
                     /locus_tag="VEV83_08375"
     CDS             7723..8448
                     /gene="mtgA"
                     /locus_tag="VEV83_08375"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HYK45168.1"
                     /translation="MANGRPSFIRRFFRIIFKVIVYGFVLSLIYLLLCKWLMPPITIT
                     QLGSVFSGNGLHRDYVSWDQISANAKLAAISGEDQLFPVHGGFDWNAISKSLDNDPSK
                     NGRAPGAAASTISQQTAKNVFLFQGEGFMRYVRKPLEAIYTKLIEWIWGKQRILEVYL
                     NTIEMGRGIFGIEEAAEQYFHKHAINLSRNEAAMIIACLPNPKEYTVKPVSRFVAWKS
                     KWILRQMNNVQGDKNVQTLINRN"
     gene            8517..9659
                     /locus_tag="VEV83_08380"
     CDS             8517..9659
                     /locus_tag="VEV83_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HYK45169.1"
                     /translation="MISNSKLPDTGTTIFTVMSQLAVEYNAINLGQGFPDFMMSDELV
                     ELVHKAMQQGYNQYVHMNGLPLLREQLAMKVQKLYGTAVDPETQITITPGGTYAIYTS
                     FTSILQPGDEVIVLEPAYDSYIPNIIVNGAVPVLVQLQYPEYSVPWDEVRNKITNRTK
                     AIIINSPHNPTGAVLRPSDIKQLRKIINGTNIFIVSDEVYEHLIFDDIAHESILRYPD
                     LLERSFVCFSFGKTYHCTGWKIGYCIASPTLMKEFRKVHQFNCFSCNSFVQYALAEFL
                     DNEDAYLSLGKFIQQKRDYFQTLMTDTNFKPITSHGSYFQCYSYEDITHENDKEFAIR
                     LTKEFRVTTVPMSSFYQSAKDDKVLRFCFAKKEQTLETAAKRLRSL"
     gene            9780..11861
                     /gene="mrdA"
                     /locus_tag="VEV83_08385"
     CDS             9780..11861
                     /gene="mrdA"
                     /locus_tag="VEV83_08385"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HYK45170.1"
                     /translation="MPVYNQSRSRIIQILFIVVFLIIVIQLLNLQIFSTDYKLQAENN
                     AIYRKVIYPDRGIIYDRRGKAILENTVMYDLMVTPSEMKGIDTTALCSILGIDTAEFR
                     KRIITAIIKNSRYKPSVFAPLLTDEMFARVNESMYKFPGFAVTERPVRAYPFHAAAHV
                     LGYLGEVDSNFLKRHAGEGYEAGDYAGMTGLERSYEKVLMGQRGVQRYIRDNKNRIQG
                     PYNNRIFDTTAIAGRNLYTSMDIDLQLLAEKLLQHKIGSAVAINPKTGGILAMATSPG
                     YDPTMLTGGQRRKNFGRLILDTARPLLNRAIKGQYPPGSTFKPIDALIALDEGIITPS
                     YGYPCGGAYYSCGRPVRCTEHFAGHSRNLRIAIAWSCNSYFSNVFRLIIDNPAYHNTQ
                     KGYLKWKEYMNDFGLGVDLNIDLPGEDDGNVPDTSGYNRDFGGPRWNSCNIVTLGIGQ
                     DRMLVTPLQMANAMCIIANKGYYYTPHFVDSIEKETPADSEFVGRYRIKKEALTHISD
                     SSYNAVQLGMEDVATFGTAARAKIEGVNICAKTGTAQNPHGKNHSLFVAFAPREDPKI
                     AICVVVENAGYGATWAAPIASLMMEKYLHDTISAQRQPEIERLANADLVPDAIKHWYY
                     KQDSIKLAKQSQKINPDAAPVFQNNLETTKPVQFDPEAEPNRKDNGDTDSTKATKDML
                     KPEEQRKPKPH"
     gene            11863..13209
                     /gene="rodA"
                     /locus_tag="VEV83_08390"
     CDS             11863..13209
                     /gene="rodA"
                     /locus_tag="VEV83_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HYK45171.1"
                     /translation="MRNSYTKSVSKGVDWMIVWLYALLVAIGILCIFMVEYNPATYKA
                     SSFFNGDTNYSKQILFTGLCIVVATFIILSDSKLYPTFSNLLYAFGIVLMLSVFVIGK
                     DINGSKSWIPLGAGFNLQPAELCKIFTALALAKFLSQLNMDFTKLSSQFFAAVITMLP
                     ALLSVMQHESGLALVYMSFFIVMYREGLPGIVLVVGFSFGALVVATLVVEKNTLAIVL
                     TALAASLIYMFRRQVRKRRGFLILIISVWFVCVGIQRFLVPYIFNDVFECYQSQRIYS
                     AVGKDYDCSQNKHAQNSEAAGRTTVKPDDYNVRQSKIAIGSGGFIGKGFLKGTQTRGK
                     YVPEQHTDFIFTSLGEAFGFMGSFLFLGIYFLLLFRIVMIAERQRSTFSRVYAYSVAS
                     ILFFHIAVNVCMTVGLFPVIGIPLPLVSYGGSSLLTFTIMIFILVRLDADRQMVLR"
     gene            complement(13303..14733)
                     /gene="dnaA"
                     /locus_tag="VEV83_08395"
     CDS             complement(13303..14733)
                     /gene="dnaA"
                     /locus_tag="VEV83_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HYK45172.1"
                     /translation="MIKSADKVWDNCLKIIKDIVEWQHFKTWFEPIKPIELNGNVLLI
                     QVPSQFFFEYLEEHYINLLAKTLKRELGKTARLEYRIMVDSGNKGKNGSMDVPAGNIK
                     FYNNNEMSFPLVINDEVKNPFVIPGLKKMQIDPQLNAAYVFDSFIEGDCNRVARRAGR
                     TVAEKPGASSFNPLVVYGGVGLGKTHLGQAIGNEVKRAHPHKLVLYVSSEKFINQFQD
                     HSRNGAINDFIHFYQLIDILIIDDVQFFAKAEKSQDALFAIFNHLHQSGKQLVLTSDK
                     SPKDLDGMQERLLSRFRWGLSADLQVPDYETRIEILERKMKNDGLEMPREVVKYVAYN
                     ISTNVRELEGAMISLLAQSSLNKRDIDLELAKKVLRNFIRTSSKEITIDAIQKMVCEF
                     FDVPYDKLLHKTRKREIVQARQITMYLAKAFTKNSLKTIGEHFGGRDHTTVIHSCQTV
                     KDLMDTDSLFRENVVELTQKVQLAAM"
     gene            complement(15322..16602)
                     /locus_tag="VEV83_08400"
     CDS             complement(15322..16602)
                     /locus_tag="VEV83_08400"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HYK45173.1"
                     /translation="MGKAINNIGKHHHKTLVIGLFGFGVVGEGLYKALQQTPSLKATI
                     KKICIKHAGKKRNAPEELFTTDKDVLLNDPEINVIVEVINESEPAFDIVSTAFLHGKH
                     VVSASKKMIAEHLPRLLELQKQTGKSFLCEAAACASIPVIRNLEEYYDNDLLHSLKAI
                     VNGSTNFILTKMFEDKLNFSEALLLAQQLGFAESDPSLDVEGYDAVNKWAILLTHAYG
                     IIEHPNNIVFNGIQNIQLSDALVAKEKHFDIKLVAQAKKLVNGKVAAFVLPQFVKQDD
                     HLSFVKNEYNGVVIESSFADKQFFYGKGAGSFPTASAVLSDISALRYNYRYEYKKLYH
                     HTVHELSNDFYVKTYVSFDDWKFVPRERFEWIEEWHAEAERKYLVGVLPFNDLKENNW
                     WRKNNTSLILAPEPVIEDVEIRKLKKKSLELAGV"
     gene            complement(16605..17657)
                     /gene="metX"
                     /locus_tag="VEV83_08405"
     CDS             complement(16605..17657)
                     /gene="metX"
                     /locus_tag="VEV83_08405"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004414 - homoserine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HYK45174.1"
                     /translation="MAKTFTYNKPFNLENGVLLKSLHLAYTTHGRLNDDKSNVVWIFH
                     ALTANSDPAEWWPGLVGNDKLFDPKKYFIVCANMPGSCYGSISPFDPNPKTGEAWYHD
                     FPWFTTRDMVRAYKLLKDHLRIDKIHIAIGGSMGGQQLLEWAIEEPKLFEYIFPIATN
                     AFHSAWGVAFNASQRFAIENDLTWKEKHVDAGLEGMKTARSIALLSYRSYDTYRLTQK
                     IISGDLASKERGAESYQQYQGEKLARRFNAFSYYFLSKGMDAHNVGRDRESPEKALEQ
                     IHARALVIGISSDILFPLTEQEFLAAHIPHAEYRAIHSPYGHDGFLLEYEQIEEAIKT
                     FLYNSVSEKSFASLQF"
     gene            complement(17841..19163)
                     /locus_tag="VEV83_08410"
     CDS             complement(17841..19163)
                     /locus_tag="VEV83_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HYK45175.1"
                     /translation="MSNYRFETLQLHAGQQIDPTTKSRAVPIYQTTSYGFDNTEHAAN
                     LFGLKQFGNIYTRIMNPTTDVLEQRIAALEGGVAALAVASGQASQFLALNNILQPGDN
                     FVSTTFLYGGTYNQFKVSFKRLGIDVRFADGDDVESFVKHIDKNTKALYLETIGNPRL
                     NIPDFEKFGALAKEYDLPLIVDNTFGAGGYLFRPIEWGANVVVESATKWIGGHGTSIG
                     GLIIDGGNYNWGNGKFPQFTEPSEGYHGLKFWDIFGEGNPLGLPNIAFIIRTRVEGLR
                     DFGPSLSPFNSFLFIQGLETLSLRVQRHVDNALELAQWLEQHPQVEFVWYPGLKSSPY
                     YELGKKYLPNGAGGILQFGIKGGVENGRKFIDSLKLVSHLANVGDAKTLAIHPASTTH
                     EQLSDSEREAAGVLPNLVRISAGIEHIEDIKADFEQAFESVFAKSFVL"
     regulatory      complement(19660..19771)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            19961..20779
                     /locus_tag="VEV83_08415"
     CDS             19961..20779
                     /locus_tag="VEV83_08415"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK45176.1"
                     /translation="MTTKIVPACICFTLIAFSLQLSSCKKDNAVAGDRNNARSVDALI
                     DSLSTGLVAWYTFDGDVLDHSGNNNNVIFNSAKPAKGKAGLPKTAYLFDGNSYMTVAN
                     RTSLNPQKITLFAVIKPKGFWAGTCHDNRIISKGYNDTWSGRYTLGYNDQAFYNYTGC
                     YDTVATKFENFVGSFGDGQGTAAGVVDNLDKVRLGRWYSIAFTYNGTYAKFYVDGILK
                     AQASATTTFTPSTQDVFIGRNEDPNFPYSFNGLIDELRIYKRALTASEIEQLSQ"
     gene            20862..21644
                     /locus_tag="VEV83_08420"
     CDS             20862..21644
                     /locus_tag="VEV83_08420"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK45177.1"
                     /translation="MKTKSTATGFVLCLTGFAMFLFSCQKEPATSKITDQNISNSVES
                     LKAHLAAWYKFTKGNTADFSGNNNHLTGYNVTSATDYLGRPKNAFYFDGSTSYMTALN
                     SPSLNPSSISLVVLIKPMGYYTGFPPTSRILMKGVDDQSSGDYFMGLNNTGSFYGTFG
                     DNQFQSNSINSADNLIQLNNWYKLVYTYDAGVGKLYKNDTLVGKSKQVATFTANTDYL
                     RIGTTGRPDYPYWFNGVIDEIRIYNVALTAAQVANVDADLGQ"
     gene            21723..24620
                     /gene="uvrA"
                     /locus_tag="VEV83_08425"
     CDS             21723..24620
                     /gene="uvrA"
                     /locus_tag="VEV83_08425"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HYK45178.1"
                     /translation="MEEMNDGNHQDFIEVFGARAHNLKNIDISIPKNKLVVITGISGS
                     GKSSLAFDTIYAEGQRRYMETFGAYARQFIGEMERPDVDKITGLSPVISIEQKTTNKN
                     PRSTVGTVTEIYDFMRLLYARAAEAYSYNTGEKMVKWSEEEIVMNIFKRFNGKKISLL
                     APLVRGRKGHYRELFEEIRKKGFVKVRVDGEIKDLVPKMQVDRYKIHDIEVVVDRLKV
                     SDEFRLRLSQSVQQTLKLGKDLMFVHIDITPETPAKGKSSLPFPKEDDLVSYSRQLMC
                     EDTGLSYEEPSPNSFSFNSPYGACPTCKGLGTMYKVNMDAVIPDPSQSISEGGIAPLG
                     EEREAHVYRTVQDVAKKHKVSLNAPINKLPQKQLNILLYGNEDGEEIEFDFDSSPEAA
                     GWDGTAYEGIVNMLKRWFNNGYSETLRDWAEKYMQLIPCETCKGSRLKKESLWFLMDG
                     KNIAQLSEMNLDKLYAWFDGIELRISNKQRAIAKDVVKEIRERLTFLLNVGLTYLTLN
                     RPSKTLSGGESQRIRLATQIGSQLQGITYILDEPSIGLHQRDNHRLIDALKNLRDIGN
                     SVLVVEHDKDIMLAADHLIDIGPRAGFHGGKIVAEGNPAQMLKLQTLTASYLNRIHHI
                     AIPEERRKGNGKVMQLKGCKGNNLKTVDANFPLGKFIVVTGVSGSGKSTLINETLYPI
                     LSKHAYNSKMIPLEYKSIKGLENIDKVIEIDQSPIGRTPRSNPATYCGFFTDIRTLFA
                     AIPEAKIRGYTAGRFSFNVKSGRCDVCEGGGMRVIEMNFLPDVYVPCEKCNGKRYNRE
                     TLEIRYKGKSISDVLNMTVEEAVEFFQNVPYLYRKIKVLDEVGLGYITLGQSAVTLSG
                     GEAQRVKLSTELSKRDTGKTFYILDEPTTGLHFEDIQHLLDVLNKLVDRGNTVLVIEH
                     NLDVIKVADHIIDLGPEGGDGGGRILFEGTPEELIKNKESYTAKFLKAELN"
BASE COUNT         7011 a         5239 c         5683 g         6729 t
ORIGIN      
        1 ttgattgtgt taagcaagat ctttccgata agaaacccgc ttaaaacaaa aaagatcgag
       61 acgccgtcgc caatgctata tctaaggagg gcaggaatgc ccaggttcaa gatcgcatgc
      121 atgtacacga ccgtcaggat agcgacggct ctcactatat ctaatccgta gactctgcga
      181 ttcatacctc ttaaggtgtg cccaaacata caaagatgcc ggggatggac cgcccatagg
      241 tttcgtccaa cagcggattt ccaaacggcc gaatacgatc gttcgttttt taatcgccct
      301 gaaatatttt tgttacgcca tatggataat accggtgaaa gtgaacgttc aatttatgtt
      361 cgaagaggtt aggcttaatt cgtgttggtc gaaaatcttt ttcaccaata cctcgttaaa
      421 ccacatatga gccgcccggt cgaagacatc actcaccatt gaactatttt gcgatgggtg
      481 agcaggttaa aggggtttac tgttaaacgg tgagaaaagt gcaaaatcgt tatagctttg
      541 gaaaagatgc gaagaaaaat cgatcagctc caacaaacat gaagttcgag gtctcaggat
      601 aattatcaaa aacacgtagc gcgaaaacta caaatgagta tcgcctaagc cttcccaatt
      661 acaaatgaaa aacaaatatt ttatgaacag caattcactt tggggatggt tcgccgctgg
      721 aattgtcggc gccgccacga tattctttgg tgtaagaact ttcaccaaag atgaaaaggt
      781 actggataat agcactgaac agcaaattgc attatcgcaa aaacaaaacc cgtcacgacc
      841 tttatatggc ctgaatgggc tcgtgaaatt caatcgcgtt ggcttgtgcg atccacgctt
      901 cataaaagtg attgacagcc ttgatatcga ttggttcagg tatcccggcg gtacgaatgc
      961 gaattatgct aactggagaa cagacagccc ttcattaagg tcggttcagc ttttggtgaa
     1021 ggccacaggc atgaaaataa tgtttgacct gaatgtatta acatccacac ttgacgatca
     1081 aatggaaatg ctggaaactg cggaccgcct tgggatagtt ggcgacggcc tttttgaact
     1141 ggggaatgaa ttgaatcagt ttaagtacga aggcaaagag cggttcccgg atgcgcgggc
     1201 ttatgcagat acctgtcata ggtggatcgc ggcgttgaag aaaagatttc cgaaagcaca
     1261 gtttgccgtt gtcggagaaa ataagaagtg gaagggtgga gaagattggg ctaacatcca
     1321 ggttaaaacg aatcctgaag ctaacctgat ttggcatttt tatccgccgg ggaaatttac
     1381 gcataatggc attttggata cgagtgcctt aaaggtgtta attcatgaag actatgtaaa
     1441 atccttcgga acaaaaattc ctccgtcgaa ggtttggatc actgaattta atattggcga
     1501 tcatgataaa gacccaaaag agcttttgga tacgtttgcg accggccagg aaaaactggc
     1561 agtgaaattc actctcaagg aatttgcaag catgggcatc aaaatgattg gcaagcataa
     1621 catagtagga aagaacttcg cagccgttta cgcggacaaa aaatctgcat accttttacc
     1681 cgttgggagg gcaataagag aatttatgct gagccaaaaa ggtcaataga gattttggta
     1741 aattgttaga aacgattctg aattcgatag ctgaaacgat tcatcgatat ggacgaatca
     1801 tttgcagcca tttagaaatt tcgagctggc ttaaaagagg atgagcatag acagaacaag
     1861 ctgttacgca aggcgattgg taagttattt tgaaaggcct aaggaattta ttacgcagaa
     1921 tatagtggaa catttcctca aaaacctgaa tgcacctata tttgcactcc acaaaatttt
     1981 ggatcggtag ttcagttggt tagaatgccg ccctgtcacg gcggaggtcg cgggttcgag
     2041 tcccgtccgg tccgcaggaa aattagcacc ttcgaggtgc tttttcattt tagcaacttt
     2101 gatggattgc ataaaaccgt tatgtaattt tcagttatgg caaaggaaat gaacaacagg
     2161 caggcatact tccattatca catcgacgat aaatatattg caggaatcat gctgctgggt
     2221 acagaggtta aatcgataag agaaggaaaa gtcagcttca acgatgctta ctgcctgttc
     2281 gataaagggg aactctggtt acgcgggtta tacatagccg aatataaact gggaactgtg
     2341 aataatcaca tagcagttca tgaccggaag ctactgctta ctcaaaaaga attgaagcgg
     2401 ctgcaggcaa aaatgaagga acgaggtttt accctgattc ccttgcgcgt tttcttcaac
     2461 gaaaaaaatt tggtcaaagt tgagatcggc cttgcacggg ggaagaaagt gcacgacaaa
     2521 cgggaatcga tcaaagaaag ggatgtggaa cgggaaatga agcgaatgat aaaatgatca
     2581 gtagctgatc aattttgcat tcaacttttt tgctaaacct tgcgctcccc atttcataac
     2641 cacattgtgg tttaatctga acaggggctt taagataaac gaaaaatagt tcatccatgc
     2701 cttgttcgtt tttacattcc agttatattg aacctttgtg atctcatttt cccgcctaaa
     2761 atgccaggtg ccttctcctt caagttcacc gaaagcttcg ccgcgcaata actgttcgtc
     2821 gatcttttca atgagtttca ttttaaatga gaggctgtat ggcaaaacac ttttccatgt
     2881 gtatgcccta actccgttta cgccgcttga atcattttcc tttatgaccg ttacttgttt
     2941 cactcctttc caccacaacg gccagtcggc tgactcataa attgaattcc aaacgtcgtg
     3001 tatcggcgca gcgatctccc aatgtgtgat gaaagaataa tcgtttttgc gcatgacaat
     3061 tttttctaac ttacgtatgt aataaagcca gagcttcgac accagttatg aaataatttc
     3121 agttctacga ggagcttcgt caaatgtttg ttaaatggtt ttcatggtta actgacgttt
     3181 aaacagcttt gttactttgc tatcagaaaa ggcatattta ttgaacgcct attaaattaa
     3241 attgaacaga aatgaaatta aagaatgttt ttctaatcgt tgccatcagc attgcaactt
     3301 ctcttttgag cgtatggggc tatggcacat ggttgcgcga ccaatctgtt aacgtgcaga
     3361 atgacgggaa agttcctgtg aactatgcag gatttttcga caaggacgcg ccaaccggaa
     3421 ttcctgattt tactgctgct gctacttccg caactccggc ggttgttcat ataaaaacca
     3481 agatcaaagg cgggactgtt tcttcgaaaa ataaaaatcc atttggagat ctttttggag
     3541 atgatgatcc gttttttcaa ttcttcggag gtccgcgcgt tatgcctgac caacaggcca
     3601 gcggtagcgg cgtaatcgtc agcaatgatg gttatattat cacaaacaat cacgtaattg
     3661 atggtgccag tgacattaat gttacacttg ctaatcgtaa aagttataag gctactgtta
     3721 ttgggaatga tcccaatacc gaccttgcgg tgataaagat cgacgcgaac aatttgccgt
     3781 atatgttata tggtaacagc gacgatgtaa aactcggcca gtgggtaatg gctgttggat
     3841 atccactcaa cctcgatgta acggttacgg caggaattgt tagtgcaaaa tcccggagca
     3901 tcggcataaa caaaagcgaa cgtgcagttg aatcgtttat tcaaacagat gcagcagtta
     3961 atccgggtaa cagcggaggc gcactcatca atacaaacgg tgaactgatc ggaataaact
     4021 cggcgattgc gtcacccacc ggttcctatg ctggttattc ttacgcaatt cctgtaaata
     4081 ttgtgaagaa agcggtgaat gacctcatca aattcggagc ggtccaacgc gcttatatgg
     4141 gcatccagta tcctaaagaa gacatgaacg atgagcagaa aaaaaacatg ggtataaagg
     4201 atggtagcgg cgtatatata ctggaagttg ctgacgacgg tgctgcaaaa tccgccggcc
     4261 tcaagaaagg cgactttata acgaaactta acgatgtaga cgtcaacagc gggcccgaat
     4321 tgcaggaaca ggtttcgcgc tacaagccgg gcgataagat ctcagttact tacgtgagag
     4381 atggcaaaga aaacctgact accctcacgc taaaaaataa atcaggcaac tacgatgtgg
     4441 ttaagagtga aactgctttc gatgatatgg gcgcggacct ggtaaccatt gacaaagaaa
     4501 ccgcacgtaa aaatgacatc agcggaggcg tgcaggttaa aaagataggc actggcttat
     4561 tgaagaatac acgcatccag gaaggtttta ttatcacgag tgtggatggc cgtgatgtaa
     4621 acaatctgga cgagctgaaa gcaatcatca acagttctca tggcacagta cggctcgaag
     4681 gcatataccc tgggtacgac ggtacttatg gttatccgtt aagcctcgat agtcagtcga
     4741 acggtggtaa tggttataat ccataattaa atttattgtt gtcgtgaccg ctggtgaaag
     4801 ccggcggttt ttttttgcca attccaagca ttcttcccgc agctgcggcg accatgggac
     4861 gttggtgagt aattttccac cgtttgttaa cttagcccga tatttatggt tttgtaagaa
     4921 ccaattcata atcttgcaag ggcggcggct atgggtcagc aggacatttt gatttctcct
     4981 gcaatttata cggcaacaat attaaacacg acgtttttac atgataagag tagttataac
     5041 cggaatgggt gcgattactc cgcttggaaa ttctgtaaag gagttttggg acaatattgt
     5101 cgcaggcaaa agcgctgcgg ggccaatcac aaaatttgac gcgtcaaaat ttaagacgca
     5161 gttcgcatgc gaggtaaaag gctttaatgg tgaaaactat tttgaaagga aggacctgcg
     5221 caaatacgat cttttttccc agtatgccat cgctgctgtt gacgaagctg tgagggatgc
     5281 aggtttggat ttttcttcat ttagtgatga gcaaagaagt gactttggcg tgatatgggc
     5341 atcaggcaac ggtggcatca ttaccttcga ggaacagctc aaagagtatt atcggggtga
     5401 tggcgtgccg cgcttctctc cgttctttgt cccgaaaagg attgaggaca tagcagccgg
     5461 gatcatttcc atccgttacc agttgtatgg tcccaactat tgcacggtgt cagcttgtgc
     5521 atcttccaat acagccatca ttaatgcatt cgacacaatt cgcttaggga aggcagtgat
     5581 gataatagca ggtggatctg aagctccgat aaccccgtcg agtatcggtg gttttaatgc
     5641 cgcacaggct ttatcaaaaa gaaatgatga tccgcagact gcatcacgtc ctttcgacaa
     5701 gaatcgcgat ggatttgtgt tggccgaagg agcaggtgcg ttgatcatcg aagaatacga
     5761 acacgcaaag aaaagaaatg cgacagtgta cgccgaaata gtgggcggcg gaatggcggc
     5821 cgacgcctat catctgacgg gcacaccgcc ggatggcaga ggcgctatcc tcggcatgac
     5881 caaagccgtg aaagaagcag ggttgcagcc aagggatatc gatcatgtaa atatgcacgc
     5941 gacttcaacc agccagggtg atgtgagtga agctttagcc ataagaaaag tctttgatgg
     6001 aaaaaaagat cttgttgtca ccgcgaccaa atccatgacc ggccacttgc ttggagcagc
     6061 cggcgccgca gaggcgatca ttactattct cagcctgaaa aacggtttga ttcctccaac
     6121 aataaacaca aaagagttgg atgaaagctt tccgccggac ctgacggttg cattaggaga
     6181 acctattccg gctaagatca ggtatgcgat gaacaataca tttggatttg gcggtcacac
     6241 ggctacatcg ctgtttaaaa aatttgagga ataaaatttg tcactgtcat atccgaagtg
     6301 ataacgccta aacgccttac cctttttggt aaacgaaaac gagaccgaca tccaactttt
     6361 tttgtgacag tttttaattt gtagcgctct tttcttcaac ctgttgtaaa cataattatt
     6421 tgtattttgc tgcaattctt cgataagcta ccataatgtt tgaatcgttg ttcaaaggat
     6481 tattgttagg cttgctgctg ggcatttctg ttggcccggt gatcttttct attttgaaac
     6541 aaagcctgaa caacggccat cgcggaggat attgttttat agcaggtgtg tctgcaagcg
     6601 atattacact cgtcttaata tgcaactcgt ttacacgttt gttcaatact gccatggagc
     6661 atgagctgat cattggcgtt gccggaagct gcttattgat cgcactcggt gtatataatt
     6721 tcttctttag gaaagttcaa accgcggaga acggaatgct gatggtgggc aacctgagga
     6781 agagagacat cgccggcatt tttttttcag gttattttat gaacacgctc aaccccggcg
     6841 cttttctatt ttggtttgcg gcaacagcca cgatcacggc tgattctaaa cagatggacc
     6901 acccggatca atacaggtta attgtatttg cgaccgcgct ggctcttaat ttatctggtg
     6961 acatatcgaa ggtgcttctg gcaaaccgga taagggccag gcttacgcca cataacattc
     7021 atcttataaa ccgcatctcc ggagcggtgc tcatcgtttt tgccatcgtc atcgtcgtta
     7081 caatgttcct tcgcagctca gtgtcgtcgc aggtttaaca tggcatttgg aacgcgacga
     7141 agtattttta aaaatgaact gctgcaaact tgttattctt ctcctgttca tttccaaact
     7201 tgcgacagca caggacatcg ttgttctcaa gagcaataga aaggttatcg aaacatggtt
     7261 ttcaggacag agtattgaac tgcaattgac aaacaaacaa tggatcaggg cgctcatcca
     7321 caagatcgaa aatgacagtt tatacctgag gccgtttgta acacaggtgc tgccgaaccg
     7381 ctggggcatg ccttatgagg acacaacttt ttatggtgca cttaccattg cgacaaatga
     7441 gatatacgct tttccgaagc cggaagaatc gtttccttac gtcaggaatg gattcatctt
     7501 ccaggttgga ggcgccggtt atcttgtgct taatcttatc aacacactgc gcgacgacgc
     7561 gccttatttc ggagaagata atttacccaa tgtgcttatt gctacaggcg tgttcgccgt
     7621 cggaaccttg ttgcacatca cgcacaaatc aacccttgtt cttggcaaaa aataccatgt
     7681 ggaatatatc tcttccaaac cttcatagta ctttcgggtg ccatggcaaa cggaaggcct
     7741 tcgtttatca gaagattttt cagaattatt tttaaagtga tcgtttatgg ctttgtgctt
     7801 tcgcttattt acttgttgct gtgtaaatgg ttgatgcccc ctataacaat cacgcaactc
     7861 ggcagtgtgt ttagcggcaa cggtttgcac cgggactatg tttcatggga ccaaatatcg
     7921 gccaacgcga aattggcggc gatatcagga gaagaccagt tgtttccggt gcacggtggt
     7981 ttcgactgga atgctatttc aaaaagtttg gataacgatc catcaaagaa cggtcgcgca
     8041 cccggagccg cggcgagcac catcagccag caaacagcga agaatgtttt tcttttccag
     8101 ggagaaggtt ttatgcgcta cgtgcgcaaa ccattggaag cgatatatac aaaactgatt
     8161 gaatggattt gggggaagca gcggatactc gaggtatatc taaatacaat tgaaatgggg
     8221 cggggcattt ttggaattga agaggctgca gaacagtatt ttcacaagca tgcgattaac
     8281 ctttctcgca atgaagcagc catgatcatt gcgtgccttc ccaatccaaa agaatacacg
     8341 gtgaagccgg tgagccggtt tgtggcatgg aaaagcaaat ggatcctaag gcaaatgaac
     8401 aacgtgcagg gggataaaaa cgtgcagact ttgatcaata gaaattaagc acgatgaaaa
     8461 aatcccaaat ccgaaatcgt aagtcctaaa tccttaagcg acataacact tttcttatga
     8521 tctcgaattc caaacttccc gataccggta caacgatctt cacggtgatg agccaattgg
     8581 ctgttgaata taatgcgatc aatcttgggc aagggtttcc ggactttatg atgagtgatg
     8641 agctggttga actggtgcac aaagcaatgc agcaaggata caatcagtat gtgcacatga
     8701 acgggcttcc cttgttgaga gagcagcttg cgatgaaagt gcaaaaattg tatgggaccg
     8761 ctgttgatcc ggaaactcag ataacaatca ccccgggcgg cacctatgcc atttacactt
     8821 cattcaccag catacttcag cccggtgacg aagtgatcgt gctggaaccg gcgtacgaca
     8881 gttacattcc caatataatt gtaaacggag ctgtccctgt tttagtccaa cttcagtacc
     8941 ctgaatacag tgtgccatgg gatgaagtaa gaaacaagat caccaacagg acaaaggcga
     9001 tcatcataaa ttctcctcac aatcctaccg gcgcggtttt aaggccgtcg gatattaagc
     9061 aactgcgcaa gatcataaac ggaacaaaca tttttattgt aagtgacgaa gtgtatgagc
     9121 atttgatctt tgacgatatt gcgcatgaaa gtattttgcg ctatcctgat ttgctggaaa
     9181 gaagttttgt ttgcttctca tttggtaaaa cttaccattg caccggttgg aaaattggct
     9241 attgtattgc ttcgcccaca ttaatgaagg agttcaggaa ggtgcaccaa ttcaattgct
     9301 tcagttgtaa cagtttcgtg cagtatgcgc tggcggaatt tcttgataac gaagacgcat
     9361 acctgtctct tggaaaattc attcagcaaa agagagatta ttttcagacg ctgatgaccg
     9421 ataccaattt caaaccgatc acatctcacg gcagttattt tcaatgctac agttatgaag
     9481 acatcaccca cgagaatgac aaagaatttg cgatccggct cacaaaagaa ttccgcgtga
     9541 ccaccgttcc catgagcagc ttttatcagt ctgcgaaaga cgataaggtc cttcgtttct
     9601 gttttgccaa aaaagaacag acacttgaaa ccgctgcaaa aagacttcgc tcactttgat
     9661 gctgtctgct gaatatctgt ataacttttc tttagaaatt tttttttcat gctgacgttg
     9721 ttatcatttt gtaatcgtca attttgcact gagaacttaa agtccccgca aatacaaaaa
     9781 tgcccgttta caatcagtcc aggagccgga tcatccaaat tctgttcata gtcgtttttc
     9841 ttatcatcgt catacagctc ctgaacctgc agatcttcag tactgattat aaactacagg
     9901 cagaaaacaa tgcgatatac cgcaaagtaa tttatcccga ccgtggaatt atctacgacc
     9961 gtcgcggcaa agccattctc gagaataccg ttatgtacga tctgatggtt acaccgtcgg
    10021 aaatgaaagg catcgataca acggctcttt gttctatcct tggcatcgac actgcggaat
    10081 tcagaaaaag gatcatcaca gccatcatta aaaactcgcg atataagcca agtgtgttcg
    10141 cgccgctcct taccgatgaa atgtttgcgc gcgtgaacga aagcatgtac aagtttcccg
    10201 ggtttgctgt tacagaaaga cctgttcgtg cgtacccgtt ccatgctgct gcgcatgtgc
    10261 tcggatacct cggagaagtt gatagtaatt tccttaaacg tcatgccggc gaaggatatg
    10321 aagctggcga ctatgctggc atgaccggtc tggagcgtag ctatgagaaa gtacttatgg
    10381 gtcagcgcgg tgtacagcga tatattcgtg acaacaagaa ccggatacag gggccgtaca
    10441 acaaccgcat tttcgacacg actgcaatcg caggcaggaa cctatacacg agtatggaca
    10501 tcgatctgca attactggca gaaaaattat tgcaacacaa gatcggaagc gccgttgcga
    10561 tcaatccgaa aacgggcggc atactcgcta tggcaacgtc acccggctac gatccgacga
    10621 tgctcacagg cggtcaacga cgcaagaatt ttgggcggtt gatcttagat actgcacgac
    10681 cgctgctaaa tcgtgcgatc aagggacaat atccgccagg ttcaaccttt aaaccgatcg
    10741 atgcattaat agcgctcgac gaaggcatca tcacacccag ttacggctat ccttgtggtg
    10801 gtgcatatta ttcgtgcggc agaccggtgc ggtgtacgga acatttcgcc ggccattcgc
    10861 ggaacctgcg tattgcgatt gcctggtcgt gcaattctta tttcagcaat gtgttccggc
    10921 tgatcataga taatcctgca taccacaata ctcagaaagg atatttgaag tggaaagagt
    10981 atatgaacga ttttggtttg ggcgtcgact tgaatattga tctgccaggt gaagatgacg
    11041 ggaacgtacc agacacatca ggatacaaca gggattttgg cgggccgcga tggaacagtt
    11101 gtaacattgt aacactcggc atcggccagg ataggatgct cgttacgcca ctgcaaatgg
    11161 cgaacgcaat gtgcatcatc gctaacaaag ggtattatta cacgcctcac tttgtcgaca
    11221 gcattgaaaa ggaaacccca gccgattcag aatttgtggg gcggtacaga ataaaaaaag
    11281 aagcgctaac acacatcagc gactcgtctt ataatgcggt tcagctcggt atggaagatg
    11341 ttgccacctt tggaacagct gcacgggcga agatagaagg cgtaaatatt tgcgcgaaga
    11401 cgggaaccgc tcaaaatcca cacggcaaaa accactctct ctttgttgca tttgctccaa
    11461 gagaagatcc taagatcgca atttgtgttg tggttgaaaa tgcagggtat ggtgctacat
    11521 gggcagcgcc gatcgcatcg ctgatgatgg aaaaatattt acatgatact atttcggctc
    11581 agcggcagcc cgagatcgaa aggcttgcga atgcagacct cgtgcctgat gcgatcaaac
    11641 actggtacta caaacaggat tctataaagc tggccaaaca aagtcaaaaa ataaatcccg
    11701 acgctgcacc cgtgttccaa aacaacctgg aaacaacgaa gccagttcaa tttgatcccg
    11761 aggccgaacc aaaccggaaa gacaacggcg atacggattc aacaaaggca acgaaagaca
    11821 tgctaaaacc tgaggagcaa cgaaagccta aaccgcattg aaatgaggaa cagttacaca
    11881 aaatcagttt cgaagggcgt agattggatg atcgtgtggt tatatgcgct gctggttgcg
    11941 atcggcattc tgtgcatttt tatggttgaa tacaaccccg cgacttacaa agcaagttca
    12001 ttctttaacg gcgataccaa ctacagcaaa caaattctgt ttacgggtct ttgtattgtg
    12061 gtagccacgt ttattatttt aagtgacagc aaactatatc ctacgttttc caacctcctg
    12121 tatgctttcg gcatcgtgct aatgctttcg gtgtttgtaa ttggaaaaga cataaacggc
    12181 tcaaagagct ggattccgct aggcgccgga tttaatctgc aaccggcaga actgtgcaaa
    12241 attttcacag cgcttgcact cgcgaaattc ttatcgcagc tcaatatgga ttttacaaag
    12301 ttgagttcgc aattctttgc cgcggtgatc acaatgttgc ctgccttgct ttctgtaatg
    12361 caacatgaat cgggcctcgc gctggtttac atgagctttt ttattgtgat gtaccgggaa
    12421 ggtttgcctg gtatcgtcct tgttgttgga ttttcatttg gcgcgctggt tgttgcaacg
    12481 ctggtagtgg agaaaaacac acttgcgata gtattaacag cactcgctgc atcgctgatc
    12541 tacatgttca ggcgccaggt caggaaaaga aggggttttt tgatactgat catttctgtt
    12601 tggtttgtgt gcgtaggtat tcaaagattt ttggtgccgt atatttttaa tgatgtattc
    12661 gaatgttatc aaagccagcg catttacagt gcagttggta aagattacga ttgcagccag
    12721 aacaaacatg cacagaattc ggaagctgcc ggcagaacta ctgtgaaacc tgatgattat
    12781 aatgtaaggc aaagcaagat cgcgattggc tcgggtggct ttatcggaaa aggatttttg
    12841 aaaggcactc aaacacgcgg aaagtatgtg cccgaacagc acaccgattt tattttcaca
    12901 tcgctggggg aggcgttcgg cttcatgggt tcttttctgt tcctgggaat ttattttttg
    12961 ctcctgttcc gtattgtaat gatcgccgaa cgacaacgaa gcacattcag cagggtgtat
    13021 gcatacagcg tagcaagcat tttatttttt cacatcgccg ttaatgtttg tatgacggtt
    13081 ggattatttc cggtgatcgg tattccgctt ccgctggtga gttatggcgg ctcttcttta
    13141 cttactttca caattatgat ctttatcctc gtgaggctag acgcagacag gcaaatggtg
    13201 ttgagatgat aaatggtgat cggttaattg ggatattggg atattgggaa tggcttaaaa
    13261 cgattaaacc aataaacaaa tagactaata aaccaatagt ccttacatcg ccgctaactg
    13321 caccttttga gtaagctcaa ctacgttttc ccggaaaaga ctatcagtgt ccatcaaatc
    13381 ttttaccgtc tggcagctat ggatcaccgt tgtgtgatcg cggccgccaa aatgttcgcc
    13441 aatagttttg agtgagtttt ttgtaaaagc ttttgcgaga tacatcgtta tctgccgcgc
    13501 ctggactatt tcgcgcttgc gcgttttatg gagcagctta tcgtaaggca catcgaaaaa
    13561 ttcgcacacc attttttgga tggcatcgat agtgatctcc ttactgcttg tgcgtataaa
    13621 attccgaagc actttttttg ccagttccag gtcaatatct cttttgttga gtgaagactg
    13681 cgcgagcaat gagatcatcg caccttccag ttcgcgcacg ttggtgctga tgttgtaggc
    13741 aacatatttc accacttctc tcggcatttc gaggccgtca ttcttcatct tacgctcgag
    13801 aatctcgata cgtgtttcat aatcggggac ctggaggtct gcactcaatc cccaccgaaa
    13861 ccggcttagc aggcgttcct gcattccgtc aagatctttc ggagatttgt ccgacgttaa
    13921 tacaagttgc ttcccgcttt gatgcaggtg attgaatatc gcaaaaagag catcctgtga
    13981 tttttcagct ttggcaaaga attgtacatc atcgatgatc aatatatcaa tgagctgata
    14041 gaaatgaatg aagtcgttga tcgcgccgtt gcggctatgg tcctggaact ggttaataaa
    14101 tttttcactg cttacataca acacaagttt atgcgggtgt gcacgcttta cttcatttcc
    14161 gatggcctga cctaaatgcg ttttgcccaa gcccacgccg ccatatacca caagcgggtt
    14221 aaaggaactt gcgcccggct tttctgcaac agttctaccc gcacgtcgcg cgacccggtt
    14281 gcagtcgccc tctatgaacg agtcaaaaac gtacgcagca tttaactgcg gatcaatttg
    14341 catttttttc aaacccggga tcacgaacgg gttctttact tcatcattta ttaccagggg
    14401 gaagctcatt tcattgttat tatagaactt gatgttaccg gccggaacat ccatgctccc
    14461 gttctttcct ttgttcccac tgtcaaccat gatgcgatat tcaagacgtg cggtcttgcc
    14521 caattcgcgc ttcaacgttt tcgcaagcag gttgatataa tgctcctcga gatattcaaa
    14581 aaagaattga ctgggtacct ggatcagtaa gacgtttccg tttaattcta tcggctttat
    14641 tggttcaaac cacgttttaa aatgttgcca ctctacaatg tccttaatta tttttaaaca
    14701 attatcccat actttatccg cggattttat catagcaata gtcaagcgtt aaacgagtta
    14761 gtagattctg attctggaaa aaaaaaccaa aaaatttgtt ccaaggttaa tgaaaaaaat
    14821 tttttgggac agagaacgaa tatcaaaatt ttcatgttga aaaaaaaatt tttttcgaca
    14881 gctttttcta cttttttcaa cggtaaaata aattttttcc tgcaagcatt tataaatgaa
    14941 gcacatcagc aggaactggc tttcagggcc aaattttttt tttttttctt ttgtggtttg
    15001 ggttttttta actacaaagt tttctttctt ttcggcgaaa agctgaaagc ctttgtgcgc
    15061 ttgttttcca gagaagttgc gcgtagacaa agatgaaaag agccgtgaat tatcgtctga
    15121 aaaaatttga ctgcgcgtga attgttcact gagatgtgga aataaatttt tttaatgagc
    15181 gttcgcgaga agattaaaag agtcagttgg tgggtgaacg ctgatcatgt atgaagttga
    15241 cggcagcgtt tttagaaata gatctgttgc tgtaaaaagg atggagtaga ttgtgcaaat
    15301 gccggtttaa aagttcttgt gtcacacacc ggcaagttct aaacttttct ttttaagctt
    15361 tctgatctca acgtcttcaa taacgggttc tggtgcgagg atgagcgacg tattattttt
    15421 acgccaccaa ttattttctt tcaggtcatt aaatggcaaa acaccgacaa gatattttct
    15481 ctcagcttct gcatgccatt cctcgatcca ttcaaaacgt tcacggggaa cgaacttcca
    15541 gtcgtcgaag cttacatacg tttttacgta gaagtcatta cttaactcat gaacggtgtg
    15601 atgatataat tttttgtatt cataccggta attataccgc aaggccgaga tatcgctgag
    15661 aacagcagac gcggtaggaa aacttcctgc cccctttcca tagaaaaatt gtttgtctgc
    15721 gaacgaactc tcgatgacga ccccattgta ttcatttttt acaaaggata aatgatcgtc
    15781 ctgtttcaca aattgcggaa gaacaaatgc agcgacttta ccgttgacca gtttcttcgc
    15841 ctgggccaca agcttgatgt cgaagtgctt ttctttcgca acgagggcat cgctcagttg
    15901 aatgttttga ataccgttga aaacaatatt gttgggatgt tcgataatac cgtatgcatg
    15961 cgtaagcaga atcgcccatt tattcactgc gtcgtaacct tccacatcta acgacggatc
    16021 gctttcggcg aaacccagtt gctgcgcaag caacaacgcc tcgctgaaat tgagcttgtc
    16081 ttcgaacatc tttgtaagaa taaaatttgt ggaaccgttt acgatcgctt tcaaagaatg
    16141 taaaaggtcg ttgtcataat attcttcaag attccggatc accggtattg aggcgcaggc
    16201 tgcagcttcg cacaaaaacg atttgccggt ttgtttttgt aattcaagca ggcgtggcaa
    16261 atgctcagcg atcatttttt tactggcgct caccacgtgc ttaccgtgca ggaacgcagt
    16321 ggaaacaata tcaaatgccg gctcactttc gttgatcact tcaacgatca catttatttc
    16381 ggggtcattt agcagaacat ctttatccgt ggtaaaaagt tcttccggag catttctctt
    16441 tttaccggca tgcttgatgc agatcttttt tattgtggct ttgagtgaag gtgtctgctg
    16501 caacgcttta tacaaacctt ctcccaccac gccaaaacca aaaagaccaa tgaccaacgt
    16561 tttatgatga tgctttccaa tattattaat tgccttaccc ataattagaa ttgtaatgat
    16621 gcgaatgatt tttctgagac gctgttatac aaaaaagtct ttattgcttc ttcgatctgc
    16681 tcatattcaa gtaaaaagcc atcgtggccg taaggagaat gaattgcccg gtactcagca
    16741 tgcggaatat gggctgcgag gaactcctgc tctgtaagtg ggaaaagaat atcgctcgaa
    16801 attccgatca ccaaagcccg cgcgtggatc tgctctaaag ccttttcagg cgattcgcgg
    16861 tctctgccca cattgtgcgc atccattccc ttacttaaaa agtaatagct gaacgcgttg
    16921 aagcgacgag ccagtttttc tccctggtat tgctggtagg attctgcgcc gcgttctttg
    16981 ctggctaaat cacctgaaat gatcttttgt gttagccggt acgtatcata gctcctgtat
    17041 gatagcaagg ctatagatcg cgcggtcttc atgccctcca ggccggcatc aacgtgcttt
    17101 tctttccagg tgagatcgtt ctctatcgcg aagcgctgtg atgcattgaa tgcaacgccc
    17161 cacgctgagt gaaatgcgtt ggtggcaatt ggaaagatat actcaaacaa tttcggttct
    17221 tcgatcgccc attccaggag ttgctggcca cccatgctac cgccgatcgc gatatggatc
    17281 ttgtcgatac gcaaatgatc cttcagcaat ttatatgctc tcaccatgtc cctggtcgtg
    17341 aaccatggaa agtcgtgata ccatgcttcg cccgttttcg ggtttgggtc gaaagggctg
    17401 atacttccat agcaactgcc cggcatattt gcacaaacga taaaatattt tttaggatca
    17461 aacagtttat cgttgccaac cagccccggc caccattccg ccggatcact gtttgcagtg
    17521 agtgcgtgaa agatccaaac aacattgctt ttgtcatcat tcagtctgcc atgcgttgtg
    17581 taggcaagat gaagcgattt taaaagaact ccgttttcta aattgaacgg tttgttgtat
    17641 gtgaatgttt ttgccatgtt ttttggtttc gatgtttcag cgtttgaaaa ctttcaatgt
    17701 ttgccggcga ccagtactgg acagaaataa tgaacttttg aagccgtgaa acgttgccgc
    17761 acagcgaaca gaacgcagaa gtgtgcgacg caacggaagc acaatggccg cacttccgct
    17821 ggtcacacaa aaaacaaaaa ttacaacaca aacgattttg caaacacaga ttcgaatgcc
    17881 tgttcgaaat ctgctttaat gtcttcaata tgttcaatcc cggcactaat gcggacgaga
    17941 ttaggcaata cacccgcagc ttctctttct gaatcgctca actgctcatg tgtggtggac
    18001 gcaggatgga tcgccaacgt tttcgcatca cccacgttcg cgaggtgact tacgagctta
    18061 agtgagtcga tgaacttgcg gccattttcc acgccacctt taataccgaa ctgcaaaatg
    18121 ccaccggcgc cattaggcaa atattttttt ccaagctcat aataagggct gctcttcagg
    18181 ccggggtacc aaacaaactc aacttgcgga tgctgttcca gccactgtgc aagttcaagt
    18241 gcattgtcaa catgcctttg tacgcgcagg cttaaggttt cgaggccctg gataaaaagg
    18301 aaagaattga aagggctcag cgacggtccg aaatctctca atccttctac gcgggtgcga
    18361 ataatgaatg cgatgtttgg caagcctaac gggttgcctt caccgaagat gtcccaaaat
    18421 tttaatccat gatagccttc gctgggttca gtaaactgtg ggaatttccc gttgccccaa
    18481 ttgtagttac cgccatcgat gatcagtcct ccaatgctgg tgccatggcc gccgatccat
    18541 tttgttgctg attcaaccac gacgtttgcg ccccattcga tcgggcggaa taaataccca
    18601 ccggcaccaa aggtgttgtc aactattaat ggtagatcat attctttcgc gagcgctcca
    18661 aacttttcaa agtccgggat attgagtcgc ggattaccga tcgtttcgag ataaagcgcc
    18721 tttgtgtttt tgtcgatgtg ctttacaaaa ctttcaacgt cgtcgccgtc tgcgaagcga
    18781 acgtcaattc ccaacctttt aaatgaaacc ttgaattggt tgtacgtgcc accatataaa
    18841 aatgtggtgg aaacaaaatt atcacccggc tgcaaaatat tattaagagc gaggaattgc
    18901 gacgcttgtc ctgacgccac tgcgagcgcg gcaaccccgc cttccaatgc ggcgatgcgt
    18961 tgttcaagca catcggtggt tgggttcatg atgcgcgtat agatatttcc gaattgtttt
    19021 aagccaaaaa gatttgccgc gtgctcggtg ttatcgaaac catacgaagt tgtttggtaa
    19081 atagggacgg ctcttgactt tgttgttgga tcgatttgtt gtcctgcatg aagttgaagt
    19141 gtttcaaaac gataattact cataaaaaaa tgtttgaatg tggaagtgtg atatggtgtt
    19201 taatagttca aatcttgttg agcgtaaatt gaaattgaga atcgaagtcg taaaaccggg
    19261 caaagcccgt gcggggtata ttatatagtt atgccttgcg gcaacaacaa atgcaacaaa
    19321 tacactcagg aacagtgttg ttatttttat gttgttgcgt ttgtaacatc ggtgaagtaa
    19381 atgcttcaca aatgtaatcg agttttcgct tcatcgataa aaaaaaattt aattgaatgt
    19441 taagtcgcca ggttcagaaa ctaacgttgg tatgtttaat ttccgacaat taccagagca
    19501 ctgcaacgat tgaaactcgt gagacgctta ctgcaaacgt ctcctttgtt tccttccttc
    19561 acgcacttaa aagaaaaacg tggtcagccc aaataagaaa gccctcctga taaatcagaa
    19621 gagctttatt ataatgaaat caaattttca gctttatctg acctatctgt tcccggtatt
    19681 tcgccaggac tggaattggc acctttcttt taaaatgaaa gaggttgcca aggcttcaca
    19741 gggccattcc ctcagccttt cttgataagt gatgcaaaga actttcgcgg tgcaaaaata
    19801 aatacgaatg cggcattagc aaaatcgttt tcatcccggt tgctcggaaa ccaactcaat
    19861 gcaactgata acagcataaa gagatgtgct gcaaattttc gacatcgtca gttgggtaaa
    19921 accatacatt tgctttgaac gccgtaattc aactaaactt atgacaacga aaattgttcc
    19981 tgcctgcatt tgttttacat taattgcgtt ttcccttcaa ttatcctcct gcaaaaaaga
    20041 taatgcggtt gctggggatc gcaataacgc aaggagcgtc gatgcattaa ttgacagcct
    20101 gtcgaccggc cttgtggcgt ggtacacttt tgatggcgat gtactcgacc atagcggaaa
    20161 taataataat gtaatcttca attccgcaaa accggccaag ggtaaagcgg gccttcctaa
    20221 aaccgcctac ctgtttgatg gcaacagtta tatgacggtt gcaaacagga cttctttaaa
    20281 tcctcaaaaa attactctgt tcgcggttat taagcctaaa ggtttttggg ccggcacgtg
    20341 tcatgataac cgcattatca gcaaaggcta taatgacaca tggagcggaa gatatacgct
    20401 cggttataac gaccaggcat tttataatta taccggctgt tatgatacgg ttgcgacaaa
    20461 atttgaaaat tttgtcggct ccttcggaga tgggcaaggc actgcggctg gtgtggtgga
    20521 taatttggac aaggtaaggc tgggcaggtg gtatagtata gcattcacat acaatgggac
    20581 gtacgctaag ttttatgttg atggtatttt gaaagcacag gcttcagcta caaccacatt
    20641 cacgccgagc acgcaggatg tgttcattgg acggaatgaa gacccgaatt ttccgtactc
    20701 tttcaatggg ttgatcgatg agctcaggat atataaacga gccctaacag cttcagaaat
    20761 tgagcagctc tcgcagtagt tccaaccagg ttcatcgcgt catacaaatt cttttcacaa
    20821 agacattaaa tttcccgctc acattatcaa ttatatcaat tatgaaaacg aaaagtacag
    20881 ccacaggttt tgtgttatgc ctcaccggtt tcgcaatgtt tcttttttca tgtcaaaagg
    20941 aacccgctac ttcgaaaata acggaccaaa acatttctaa ttctgttgaa tctctcaagg
    21001 cgcatctggc cgcatggtac aaattcacaa aaggaaatac cgctgatttc agcggcaaca
    21061 ataatcactt gacaggctat aatgtgacgt cagctacaga ttacctggga cgtccaaaga
    21121 atgcctttta cttcgatggc tccaccagtt acatgaccgc cctgaattct ccttctttaa
    21181 atccttccag catttcactc gttgttttga tcaaaccaat gggatactat acgggttttc
    21241 cacccacgtc gcgaatactt atgaaaggag tcgacgatca atcgagcgga gactacttca
    21301 tgggcttaaa caacaccggc agtttttatg gcacttttgg cgataatcaa tttcaatcga
    21361 actcgataaa cagtgcggac aacctgatcc agctcaacaa ctggtacaaa ttggtttaca
    21421 cgtatgatgc gggtgttggt aaattatata agaacgatac actcgtcggc aagtctaaac
    21481 aagttgcaac gtttactgcc aatacagatt atttgagaat tggtaccact ggccggcccg
    21541 attatcctta ttggtttaat ggcgtgatcg atgaaataag gatctacaac gttgcattaa
    21601 ccgccgcgca ggtggcaaat gtagatgcgg acttgggaca atgatgcgtt tgaaattgtt
    21661 catgacaggc agttctccga tttacaaaaa tcctttttta atccatcgct atatttgttg
    21721 tgatggaaga aatgaatgac ggaaatcacc aggactttat tgaagtcttt ggtgcccgtg
    21781 cgcataacct gaagaacatt gatatttcga tcccaaaaaa caaactggtc gtaattacgg
    21841 gcatcagcgg cagcggaaaa tcatcactgg catttgatac tatttatgca gaaggccagc
    21901 ggaggtatat ggaaaccttc ggtgcttatg ccaggcaatt tattggcgag atggaaaggc
    21961 ctgatgtaga taagatcaca gggctttcgc ctgtaatttc cattgaacaa aaaaccacca
    22021 acaaaaatcc acgttccacc gtaggcaccg taaccgagat ctatgatttc atgcgcctgc
    22081 tctatgcgcg cgcagctgaa gcctacagtt ataataccgg cgagaaaatg gtgaaatgga
    22141 gcgaagaaga aattgtcatg aatattttca aaagattcaa cggcaaaaag atctctcttc
    22201 tcgctccgct ggtacgtgga agaaaaggtc actaccgtga gctgtttgaa gaaattcgaa
    22261 aaaagggttt tgtaaaagtg cgcgtggatg gggagattaa agaccttgtt cccaagatgc
    22321 aggttgaccg ttataaaatt cacgatattg aagtggttgt tgaccggcta aaagtgagcg
    22381 atgaattcag gttgcgttta agccaaagcg ttcagcaaac attgaagctt ggtaaagacc
    22441 tcatgtttgt acacatagat attacgccgg aaacacctgc taagggaaag tcatcgttgc
    22501 ctttccccaa agaggacgac ctggtcagtt attcgaggca gttaatgtgc gaagacaccg
    22561 gcctctctta tgaagagccg tcgccaaact cattttcttt taattcgccc tatggcgcat
    22621 gtcccacctg taaaggattg ggcacaatgt acaaggtgaa tatggacgcg gtgatccctg
    22681 acccttcgca aagtattagc gagggtggta tagcgccgct gggagaagaa agagaagcgc
    22741 atgtgtatcg tacggtgcag gatgttgcaa aaaagcataa agtctcacta aatgcgccga
    22801 tcaataaact accgcaaaag caactgaata ttttgttata cggcaatgaa gacggcgagg
    22861 aaattgaatt tgatttcgac tcgtcgccgg aggctgcagg ttgggacgga actgcttacg
    22921 aggggatcgt aaatatgcta aaacgatggt tcaataacgg gtacagtgaa acactgcgcg
    22981 actgggctga aaaatacatg caactgatcc cctgcgaaac ctgtaagggc agccgattga
    23041 aaaaagaaag cttgtggttc ttaatggatg gaaaaaatat tgcacagctc agtgaaatga
    23101 atttggacaa gctgtatgca tggtttgatg gcattgaatt acggatcagc aacaaacagc
    23161 gcgctattgc aaaagatgta gtgaaggaaa taagagaacg attaacattt ttgctcaatg
    23221 tcggattaac gtatctaaca cttaatcgac catcgaaaac attgagcggc ggcgaaagcc
    23281 agcgtattcg ccttgcgacg caaattggtt cgcagttgca ggggatcacc tatatattag
    23341 atgaaccgtc gatcggtttg catcaaaggg acaatcatcg tttgatagac gcattaaaaa
    23401 acttacgcga catcggcaac agcgtattgg tcgtggagca cgacaaagac atcatgctgg
    23461 ctgcggatca tttgatcgat atagggccga gggccggttt tcacggcgga aagattgtgg
    23521 ccgaaggaaa ccctgcgcaa atgctgaagt tgcaaacgct gacggccagt tacctgaacc
    23581 ggatccatca cattgccatt ccggaggaac ggagaaaggg caatggaaag gtgatgcagt
    23641 tgaaaggttg caaaggcaac aacctgaaga ctgtagatgc aaattttccg ctgggtaagt
    23701 ttattgtggt gaccggtgta agcggcagcg gtaaatccac tttgatcaat gaaacgctgt
    23761 atccgattct ttcgaagcat gcatacaatt cgaagatgat cccgctggaa tataaaagta
    23821 ttaaaggcct tgagaatatc gataaggtga tagagatcga tcagtcgccg atcggcagaa
    23881 caccgagaag caatcccgcc acttactgtg gtttcttcac tgatataaga acattgtttg
    23941 ctgcaattcc ggaggcaaag atccggggct atactgccgg tcgattttcg ttcaacgtga
    24001 agagcggccg ctgcgatgtg tgcgaaggcg gcggcatgcg tgtgatcgag atgaattttt
    24061 tgccggatgt gtatgtgccg tgcgaaaaat gtaatgggaa acgctataac cgggaaacac
    24121 tcgaaatacg gtataagggg aaatcgattt cagatgtatt gaacatgaca gtggaagaag
    24181 cggtggaatt ttttcagaac gtgccatatc tctaccggaa aataaaagtg ctggatgaag
    24241 tgggcctcgg ctatataacg ctaggccaaa gtgccgtcac gttaagcgga ggcgaggcac
    24301 aacgcgtgaa actttcgaca gagttatcaa agcgcgatac cggcaaaaca ttttacatac
    24361 tcgatgagcc aacgacgggt ttacattttg aagacatcca gcacttgctg gatgtactga
    24421 acaagctggt tgatcgcggt aacacggtgc ttgtgatcga gcacaatctt gatgtgataa
    24481 aagtcgcgga tcacattatt gatctcgggc ccgaaggcgg tgatggcggc ggcaggatat
    24541 tgtttgaagg aacgcctgaa gaactcatca aaaataaaga aagctacacg gcgaaatttc
    24601 taaaggcaga gttgaattag ttagttctct cgttgaagat aacatatgca aggacttcga
    24661 ct
//
LOCUS       DASQJI010000299         2373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2950981,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000299 DASQJI010000000
VERSION     DASQJI010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2950981"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..1337)
                     /locus_tag="VEV83_08430"
     CDS             complement(234..1337)
                     /locus_tag="VEV83_08430"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK45179.1"
                     /translation="MKSRTFAKPLFTTLFFLAVLLSSIAPLHAQDNTAAVTTSKFTVR
                     EDNDRDGIKNRKDKCAETPAGVAVDAQGCPLDTDKDGVVDYLDKCPDVPGSADMNGCQ
                     DKDKDGVADNDDKCPDVPGSTRFEGCPDSDGDGIDDAKDKCPNAKGLDMFQGCPDTDG
                     DGVADTNDKCPDTHKGIKVDVNGCNADIDKDGVADTEDKCPDTKNGIKVDDKGCPVDA
                     DADGVVDSEDKCPSVMGDANNNGCPLVKPDVAKRLEFAARGINFETGNATIKAASYPM
                     LDEVVSIISEYKDYDLKMGGHTDNVGDDASNLRLSQNRVDAVKTYLVSKGVSESRIAA
                     TGYGETIPIGDNKTAKGKEENRRVELQLVLRGL"
     gene            complement(1600..>2373)
                     /locus_tag="VEV83_08435"
     CDS             complement(1600..>2373)
                     /locus_tag="VEV83_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK45180.1"
                     /translation="KSLDKSALLQLALHGLIISLVTIIIRVLWVFGGAYHQRIFFRKR
                     SDDPGDTEPISWKNVLIVAWTGTRGVVSLAAALALPLTLRNGTSFPQRHAILLLAFIV
                     IFVTLVVQGLTLPLLIRMLKIKPEVRRQKQEEDELQLTLTENTVHFIDRDFPLELDDK
                     VLDQLKKQYGFNYNLLSKKNTGNRSEQKQYRSQLNYINDLLSAQLEIIKFQRELLLKF
                     HTEGTFNDETITKAERDLDIEELRLNTMLEKGGANSPVG"
BASE COUNT          579 a          566 c          491 g          737 t
ORIGIN      
        1 caacctgatg taaaattact ggttgctcag ttgcaaaccc agggactcga gggactcgcg
       61 ggaccatgcg cgcagtcgct cgtgtcccag aacagtgaaa taaacagcag cgtgccaagc
      121 gactttcagt ctctttcggc aatttttcgt gttgcgcaaa agtaaaaacc gcccggtgtt
      181 tgcgaacggt tttctttcga ggggctaatt ttattttgtt acaattttat ttcttacaag
      241 cctcgtaaaa caagctgcag ttcaactctc ctgttttctt cttttccttt tgcagtttta
      301 ttatcgccga tgggtattgt ttcaccatat cccgtagctg cgatcctgct ttcagaaaca
      361 cctttgctta ctaggtaagt ttttaccgca tccacacggt tttgagaaag tctcaggttg
      421 ctggcatcat ctccgacgtt atctgtatgc cctcccatct tcaaatcata gtctttgtat
      481 tcactgatga ttgatactac ctcatccagc attggataag aagcggcttt tatagttgca
      541 tttcctgtct caaaatttat tccgcgtgca gcaaactcta agcgttttgc cacgtccggt
      601 tttaccaggg ggcaaccgtt attgtttgca tcgcccatta ctgaaggaca tttatcttct
      661 gaatctacca ctccgtcagc atctgcatca acagggcatc ctttgtcatc gacctttatg
      721 ccgttttttg tatcggggca tttatcttcc gtgtctgcaa cgccatcctt atcaatatcc
      781 gcattgcaac catttacatc tactttaatc cctttgtgcg tatcaggaca tttatcatta
      841 gtatctgcaa caccatcccc gtcagtatcg gggcaaccct ggaacatatc caatcctttt
      901 gcgttagggc atttatcttt cgcatcatcg ataccatcgc catcactatc ggggcagcct
      961 tcaaatcttg ttgaacccgg tacatcgggg catttatcat cgttatcggc tacgccatct
     1021 ttatctttgt cctggcagcc attcatatca gccgaaccgg gcacatcggg gcacttgtct
     1081 aaataatcaa ctactccatc tttgtcagta tcaaggggac agccctgggc gtctaccgcg
     1141 acacccgccg gagtttcggc acatttatct ttcctgttct ttataccatc acgatcattg
     1201 tcttcccgta cagtaaattt agaagttgta actgctgcag tattatcctg ggcatgcaag
     1261 ggagctattg aagatagcag aactgctaaa aagaaaaggg ttgtaaaaag gggttttgca
     1321 aacgttcttg atttcataat ttagatttaa ttgtgtgtgc gatcatgcag tccttttaga
     1381 taccaggatc accagcattt aataactgtt taccgcgaaa ttttgttgta actattggta
     1441 taggtaagta tagaaataga gatagtgaaa ggtagcagct taacgaggat aaaatgttac
     1501 acttttcagt gaatgagtta cataattacc atgtttgtac atcgcgctcg tctatttaac
     1561 tccgccgttt agtctccggc caacaattcg atttgctttt caaccaacgg gactattggc
     1621 tccgcctttc tctaacattg tattcaggcg cagctcttct atatcgagat cgcgttcggc
     1681 tttggtaata gtttcatcgt taaacgtacc ttccgtatga aacttcagca acagctcccg
     1741 ttgaaatttt atgatctcaa gctgtgccga caacaggtcg ttaatatagt ttagctgcga
     1801 tctatattgt ttttgctcgc tgcgattccc tgtattcttt ttggaaagca ggttgtagtt
     1861 gaagccgtat tgcttcttta gctggtccag cactttatca tcgagctcaa gtggaaaatc
     1921 gcgatctata aaatgcacag tgttttcagt aagagtaagc tgcaactcat cttcttcctg
     1981 tttttgccgg cgaacttccg gttttatttt cagcatccgt atcaacagcg gcagtgttaa
     2041 tccctgaact acgagggtaa caaatatcac gataaaggcc aacagcagta ttgcatggcg
     2101 ctgcggaaag gatgtgccgt ttcttagtgt taacggcagg gcaagtgccg cggccaggct
     2161 caccacgccg cgtgtaccgg tccaggcgac aatcagcaca ttcttccatg agataggttc
     2221 tgtatcaccc ggatcgtcgc tgcgttttct aaaaaaaatg cgctggtggt aagcaccgcc
     2281 gaaaacccat aatacgcgta tgataatcgt tacgagactt atgataagcc catgcaaggc
     2341 cagttggagc agcgcgcttt tgtcaaggct ttt
//
LOCUS       DASQJI010000300         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_801270,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000300 DASQJI010000000
VERSION     DASQJI010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801270"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..1128)
                     /gene="hypD"
                     /locus_tag="VEV83_08440"
     CDS             complement(25..1128)
                     /gene="hypD"
                     /locus_tag="VEV83_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HYK45181.1"
                     /translation="MRYLSEFRSPELVESLLKKIKHTVTRDWNIMEVCGGQTHSLVKN
                     GILNMLPSNIEMIHGPGCPVCVTPVSLIDKAVHLAMEHNVVLCSYGDMIRVPGSGISL
                     LEAKAKGADVRILYSPLEAVTIAKENPDKEVVFFAVGFETTAPANALSVINAKRAGLQ
                     NYSILASHVLVPPAIEGIMDDELSNVDAFLGAGHVCAIMGIHEYYPLVEKYKVPIVIT
                     GFEPVDLLEGIYMVVKQLEAGKAKLENQYARVVKEEGNIKAQETIYEVFDVTDRLWRG
                     MTVIPMSGYKVKDAYSDFDADKKFAIDIAEPLENSGCIAGEIMKGIKKPFNCQHFGKR
                     CKPTTPLGAPMVSNEGACAAYYHYAGLAKGVEI"
     gene            complement(1391..1636)
                     /locus_tag="VEV83_08445"
     CDS             complement(1391..1636)
                     /locus_tag="VEV83_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HYK45182.1"
                     /translation="MCLAIPGKIQSIEINDGVRLAKTSFGGIIKNVTLELLPEAQVND
                     YILVHVGVAISKVDEEEALTVYKYLEELGELTDLHNE"
     gene            complement(1640..>1858)
                     /locus_tag="VEV83_08450"
     CDS             complement(1640..>1858)
                     /locus_tag="VEV83_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45183.1"
                     /translation="TLAMIISKVAIKERVRKVAFSGGVFQNALLVDLVNLQLSKSFEL
                     YFHEQMPPNDECIAFGQLQHSLNITRKN"
BASE COUNT          528 a          476 c          324 g          530 t
ORIGIN      
        1 tgcaatctgc aattaaacca aatcctaaat ctccacccct ttcgctaatc ctgcgtaatg
       61 ataatacgcg gcgcatgcac cttcgttgga aaccataggc gcgcccagcg gcgttgttgg
      121 tttgcatcgt ttgccaaagt gttgacagtt gaaaggtttt tttattcctt tcatgatctc
      181 ccctgcaatg cagccagaat tttccagcgg ttccgcaata tcaatagcaa actttttgtc
      241 tgcatcaaaa tcactatatg catccttgac tttgtaaccg ctcatcggga taacagtcat
      301 tccgcgccat agacggtctg ttacgtcgaa tacttcataa atggtttcct gcgcttttat
      361 attgccttct tccttcacaa ctcttgcata ttggttttcc agtttcgcct ttcccgcctc
      421 aagttgcttt acaaccatat aaattccttc aagcaggtca actggttcga aaccggttat
      481 tacgataggc actttatact tttcaacaag cggataatat tcatgaatac ccatgatcgc
      541 gcatacgtgc cccgcgccga gaaaagcatc cacattgctg agctcatcat ccattattcc
      601 ttctatcgca ggcggcacca ggacgtgcga tgcgaggatt gaataatttt gtagccctgc
      661 tcttttagcg tttataactg acaatgcatt tgcgggcgct gtcgtttcaa atccaaccgc
      721 gaaaaaaaca acttccttgt ccggattttc cttcgcgatc gttacagctt caagcggcga
      781 atagagaatg cgaacatctg cgcctttggc ttttgcttcg agcaagctga tgccggagcc
      841 aggcacacgt atcatatcac cgtacgaaca aagtaccacg ttatgttcca tcgcgagatg
      901 cacagcttta tcgatcagac tcaccggcgt tacacacaca ggacatcccg gaccgtgtat
      961 catttcgatg ttggacggga gcatgttgag aatgccattt ttcaccagcg agtgcgtttg
     1021 cccgccgcac acttccataa tattccagtc tcttgtaacc gtgtgcttga ttttcttcag
     1081 caggctttca accaactccg gtgaacggaa ctcagacaag tatctcattg atcttatagt
     1141 aacattgaac ggtttgaaaa tttcaaacca gagaaaatct caagaaacaa ataacaaatg
     1201 acaaaaaaat ctcaaaagac aagttccaaa tcgcaaaaaa tcccaattcc aaatgacaaa
     1261 aaaattcaac aaataaattt caatctgaac acacaaattc gaaatagaaa atcaaaatcg
     1321 cgcctacgcc aaaatcctat ttcctaattc ccaaatccta attccaaaat cctaattccc
     1381 aattcccacc ctactcattg tgcaaatccg tcaactctcc caactcttcg aggtatttat
     1441 aaaccgtcaa ggcctcctct tcgtccactt tgctaatggc aacgcccacg tgcacaagta
     1501 tatagtcatt cacttgtgct tcaggaagca actcaagggt cacattttta atgatgccgc
     1561 caaaagatgt ttttgcgagt ctgacgccgt catttatttc aatcgactga atcttacccg
     1621 gaattgctaa acacatacat tagttttttc tcgtgatatt tagagaatgt tgcagctgac
     1681 caaaagcgat gcattcgtca ttaggtggca tttgctcatg aaagtataat tcgaaactct
     1741 tcgataattg taaatttact aaatccacca atagagcatt ctggaaaacg cctccgctaa
     1801 aagcgacctt tcttaccctt tctttgatcg ccactttgga aatgatcatc gccagcgt
//
LOCUS       DASQJI010000301         5287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_33147,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000301 DASQJI010000000
VERSION     DASQJI010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5287
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33147"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VEV83_08455"
     CDS             <1..845
                     /locus_tag="VEV83_08455"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK45184.1"
                     /translation="NQLYLSVLFLDEQLKQAELVKNDLKTGIKSVEAQVNNGVAFRSN
                     LNLLQAQLLQSEQRTTELEASRKGLLETIGLFINQSVNKDAVFQRPPSPENVSAENIR
                     RPELQLYSARQRLNSSQLKLIDANNTPRASVFFQGGYGKPALNFLENKFAFFYFTGLR
                     FSWDFGGLYTSRKEREQVEINNSMVDVEKDLFLLNTNTQLKQQQAEIDKMIQLIAEDN
                     QIVDLRNKVTEAAKAQLENGVITANDFLIQVNAEDQARQARITHELQLLQARITYQTI
                     SGIK"
     gene            852..1799
                     /locus_tag="VEV83_08460"
     CDS             852..1799
                     /locus_tag="VEV83_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HYK45185.1"
                     /translation="MKKIFLRLVIPALLFFACNNDENKFDAQGTFEANETIVSSEIPG
                     KLVSFNVQEGQTIPKDSIVGAVDATNLVLQKEQVEASIGSLNQKTADVQPQVKMLQDQ
                     LAVQQSQMQNMLHEKARIEKLVKADAATTKQLDDISFQIDAMQKQMDVTKQQMNVQKN
                     NVSTQNRGILSEAQPLQKQAEQLQDQIKRANIINPVNGTILTKYAEPGEVVAAGKALY
                     KIADLSTLNLRAYITGAQLSQVKLNQQVKVMIDEGEKKYKDYQGTITWISDKAEFTPK
                     TIQTKEERANLVYAVKIKVKNDGYLKIGMYGEVVLPPSP"
     gene            1891..2853
                     /locus_tag="VEV83_08465"
     CDS             1891..2853
                     /locus_tag="VEV83_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45186.1"
                     /translation="MNVVKKGNSSPLGGGGVVVEDIVKTYGTKKKLVTALDDISFEVE
                     PGELFGIIGPDGAGKTSLFRILTTLLLADKGHATLAGFDVVKDYKAVRKRVGYMPGRF
                     SLYQDLTVQENLDFFATIFNTSIHENYDLIKDIYKQIEPFKERKAGKLSGGMKQKLAL
                     SCALIHRPSVLFLDEPTTGVDAVSRKEFWDMLKNLKQQGITILVSTPYMDEASLCGRV
                     ALVQSGKILSINTPEGIVQEFSKPLWAVKSETMLHLLKDLQRSDFVEDAYPFGEYHHV
                     VLKDGDGEESLAKFIAERVNEHAILQQVKPDIEDCFIALMKEYS"
     gene            2864..3643
                     /locus_tag="VEV83_08470"
     CDS             2864..3643
                     /locus_tag="VEV83_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45187.1"
                     /translation="MNKENHTSKSNTRPSSGGITANKLTKRFGNFIAVNEISFEVQKG
                     EIFGFLGANGAGKTTAMRMLCGLSLPTSGEATVAGYDVYKQNEKIKSNIGYMSQKFSL
                     YEDLTVKENMQFYGGIYHMTDRYIKSKTESILNHLRLEKEANVLVKSLPLGWKQKLAF
                     SVALFHDPAIVFLDEPTGGVDPVTRREFWNMIYEAADGGTTVFVTTHYMDEAEYCNRV
                     SIMVDGRIEALDTPSALKTTYNASSMDDVFLKLARKAKRGD"
     gene            3664..4827
                     /locus_tag="VEV83_08475"
     CDS             3664..4827
                     /locus_tag="VEV83_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45188.1"
                     /translation="MKKRENNFKKLGNPSLGVARKQFFSFVRKEFHHIFRDRRTMFIL
                     LGMPIVEIIIFGFALTNEVKNAKIAVLDNSKDASSQSLIIQMNASRYFDVEENLYSYD
                     GIENAFKQGKIKLAFVIPQHFADDIEHLNKTQVQLIADASDPNVANTLTNYATSIIMD
                     FQKRVTNNAKMPYTIDTEVRMLYNPQQLGAYNFVPGVMAMVLLLVCTMMTAITIVKEK
                     ELGTMEVMLVSPMRPQLVVMAKAVPYLVLSTVNIASILLLSVFVLEVPINGSLALLVF
                     ESILFTLLSLSLGLLISAGAESQQTAMFISLMAMFLPTVMLSGFMFPIENMPLPLRLL
                     SNIVPAKWYYVIIKSVMIKGTGLQTIWKETLVLFGMTSFFLLLAIKNFKIRLE"
BASE COUNT         1653 a         1061 c         1214 g         1359 t
ORIGIN      
        1 tcaaccaatt gtatttaagt gtcctctttc tcgatgagca attgaagcaa gccgaattgg
       61 taaagaatga cttgaaaacc gggatcaagt ctgtagaagc gcaggtaaat aacggcgtcg
      121 cattcaggtc aaatttgaat ttattacagg cccaattact tcaaagcgag caacgtacaa
      181 cggagttgga agccagccga aagggattgc ttgaaacgat cggcctgttt attaaccaat
      241 ccgtgaataa agatgccgtc ttccaacggc cgccttcccc tgaaaatgtt tccgcagaaa
      301 atatccggcg cccggagctg cagttatatt ctgcgaggca gcgactgaac agcagccagt
      361 taaaattgat cgatgcaaac aatactccaa gagcgagtgt gtttttccag ggcggttatg
      421 gaaagccggc gttgaatttc cttgaaaata aatttgcttt tttctatttc accggcctgc
      481 ggttttcgtg ggattttggt ggcctctata cttccagaaa agaaagagag caggtggaaa
      541 tcaacaacag catggttgac gtggagaaag atcttttcct gctgaataca aatacgcaat
      601 taaaacagca gcaagctgag attgataaaa tgatccaact gatcgccgaa gacaaccaga
      661 tcgttgatct gcgaaacaag gtgacggaag ctgcaaaagc tcaacttgaa aacggcgtga
      721 taacagccaa tgattttttg atccaggtaa atgccgaaga ccaggcgagg caagcccgca
      781 taactcatga gcttcaacta ttgcaggccc gcatcacgta tcaaaccata tcaggcatta
      841 aataaactaa catgaagaaa atatttttgc gtttggttat tcccgctctt ctttttttcg
      901 cctgcaacaa cgatgaaaat aagtttgatg cgcagggaac ttttgaagcg aatgaaacga
      961 tagtgtcttc tgagattccc ggaaaattgg tttcattcaa cgtgcaggaa gggcaaacga
     1021 tcccaaaaga tagtatcgta ggcgcagtcg atgccacgaa cctcgtattg caaaaggaac
     1081 aggtggaagc ttctatcggg tcgttaaatc aaaagactgc agacgtgcaa ccgcaggtta
     1141 aaatgttgca ggaccagctt gcagtgcagc agtcgcagat gcaaaacatg ctgcatgaaa
     1201 aagcacggat cgaaaaactg gtcaaagctg atgcggctac aacaaaacaa ctggacgaca
     1261 ttagttttca gatcgatgct atgcaaaaac aaatggacgt gacgaagcag caaatgaacg
     1321 tacaaaaaaa taatgtgtca acacaaaacc gcggcatctt aagtgaagct caaccgttgc
     1381 aaaagcaggc cgagcagttg caggaccaaa taaaaagggc caatataatt aacccggtaa
     1441 acggcacgat acttacaaaa tacgccgagc cgggcgaggt ggtcgcagcg gggaaagcgc
     1501 tgtacaagat agccgatttg tctacgctca accttcgcgc ctatatcacc ggtgcgcaac
     1561 tgtcgcaggt gaaattgaat cagcaggtga aagtgatgat cgatgagggc gaaaaaaaat
     1621 ataaggatta tcagggtacc atcacctgga tctcggacaa ggcagagttc actccgaaaa
     1681 ccatccagac aaaagaagaa agagcaaatc ttgtatacgc agtcaagata aaagtgaaga
     1741 atgatggcta cttaaagatc ggcatgtacg gagaagtggt gttgccccca tccccttaaa
     1801 gacagtgaat tcaagttgcg aacagataga ctaaagttca gcactaaatt gattgtataa
     1861 ttgacccatt gtagaaatgc agactaaaga atgaacgtag ttaaaaaagg caattcctcc
     1921 cctttagggg gcgggggcgt cgttgttgaa gatatcgtaa aaacgtacgg gacaaaaaag
     1981 aaactcgtca ccgctctcga tgacatttca tttgaagtgg aaccgggaga attatttggc
     2041 atcattgggc cggacggtgc ggggaaaacc tcattgttca gaattcttac aaccttgctt
     2101 ctggcggaca aaggccacgc gacactggcc ggctttgatg tagtgaaaga ttacaaagcg
     2161 gtaaggaaac gtgttggtta tatgcccggc aggttttcat tataccagga ccttaccgta
     2221 caggagaacc ttgatttctt cgccaccatc ttcaatacgt caatacacga gaactacgac
     2281 ttgataaaag acatctacaa acaaatagag ccttttaaag aaaggaaagc cggcaaattg
     2341 tccggcggca tgaaacaaaa acttgcactc agttgtgcat tgatacatcg tccatcggtt
     2401 ctgttccttg acgaaccaac aacaggtgta gatgcagtgt cgcgcaagga attttgggac
     2461 atgcttaaaa atttgaaaca acagggcatt accattctcg tatccacacc ctatatggat
     2521 gaggcaagtt tatgtggccg ggttgcgttg gttcagagcg gaaaaatttt atcgataaat
     2581 actcctgaag gaatcgtgca agaattttca aaaccgttat gggctgtaaa atcagaaacc
     2641 atgcttcatt tactcaaaga tttgcagcgg tcagattttg tggaggatgc ctacccattc
     2701 ggtgaatatc atcatgtggt tttgaaggat ggggatggcg aggagtcgct tgctaagttt
     2761 attgctgagc gcgtgaacga gcatgcaata cttcaacaag taaaacccga catcgaagat
     2821 tgttttatcg cattgatgaa agaatactca taaccgcaga acattgaaca aggaaaacca
     2881 tacatcaaaa tcgaataccc gtccttcttc tggtggaatt acagcgaaca agctgactaa
     2941 aaggtttgga aattttattg ctgtgaacga gataagtttt gaagttcaaa agggagaaat
     3001 atttggattt ctcggggcta atggtgccgg taaaaccact gcgatgcgca tgttgtgcgg
     3061 tttgtcattg ccgacatccg gcgaggcaac cgtggcagga tatgatgttt ataaacagaa
     3121 tgagaagatc aaaagtaaca ttgggtacat gagccagaaa ttttctttgt atgaagatct
     3181 aacggtgaag gagaatatgc aattctatgg tggtatctat cacatgacag accggtacat
     3241 caaaagcaaa acggaatcga tacttaatca ccttcggctg gaaaaagaag caaatgtttt
     3301 ggtgaaatcg ctcccactcg ggtggaaaca aaagcttgca ttttccgtcg ctctttttca
     3361 cgaccctgcg attgtttttt tggatgaacc gacaggagga gtagacccgg ttacacgcag
     3421 agaattctgg aacatgatct acgaggctgc agatggcggc accaccgtgt ttgtgaccac
     3481 gcactacatg gatgaagcgg aatattgcaa ccgtgtaagc atcatggttg atggcagaat
     3541 agaagcactc gacacaccat cagctttgaa aacaacatac aacgcatcat caatggatga
     3601 tgtgttttta aaactcgctc gaaaagctaa gcgcggagat taacaggccg acgtgaataa
     3661 aagatgaaaa agcgcgaaaa taattttaag aaattgggta atccctcttt aggggttgcg
     3721 cgcaaacaat tcttttcatt tgtaagaaaa gaattccatc acatatttcg ggacaggcgt
     3781 accatgttta tcctgctggg aatgccgatc gtggagatca tcatttttgg ttttgcactt
     3841 acgaacgaag taaaaaatgc aaagatcgca gtgctggata attccaaaga tgcatcgtct
     3901 caatcattga tcatccaaat gaatgctagc cggtatttcg acgtggaaga aaatttatat
     3961 tcttacgacg gaattgaaaa tgcatttaaa caaggtaaga tcaagctcgc gtttgtaata
     4021 ccgcagcatt tcgcggacga cattgagcac ctgaacaaaa cacaggtcca gcttattgct
     4081 gacgcgtctg atcccaatgt agctaacaca ttgacaaatt atgccacgtc gatcattatg
     4141 gattttcaaa agcgcgtcac gaacaacgca aaaatgccgt acaccatcga caccgaggta
     4201 cgcatgttgt ataatccgca acagttaggc gcttacaact ttgtacccgg ggtgatggcg
     4261 atggttttgt tacttgtgtg tacaatgatg actgccatca ccattgtaaa agaaaaagaa
     4321 ctgggcacca tggaggtcat gctggtgtcg ccaatgcggc cacaactcgt agtcatggca
     4381 aaggcagtac cttaccttgt attatcaacc gtaaatattg caagcatcct gttgctgagc
     4441 gtatttgtac ttgaagttcc aatcaacggc agtttggcat tgctggtttt tgaaagcatt
     4501 ttatttacac tgctttcatt atcgctgggt ctattgattt cggcaggagc ggaatcgcag
     4561 cagactgcca tgttcatatc cctcatggcc atgtttcttc caacggtgat gttaagcggt
     4621 tttatgtttc cgatcgaaaa catgccatta ccattgcggc tgctgtccaa catagtgcct
     4681 gcaaaatggt attatgttat tataaagtcg gtgatgatca aaggaacggg gcttcaaacg
     4741 atctggaaag aaacactcgt actgtttgga atgacgagtt tctttttatt actggcaata
     4801 aaaaatttta aaataagatt agagtgagac gatggttgca aaaacacaaa gaaacaagtt
     4861 ccaagaatga aataaattaa aaaataaaaa ttaaaaaagt aacgttccgg attgaatcag
     4921 ctgtttctca ttttttcatt ggcttttctt tggagcttgt gatttgtgat ttggaacttt
     4981 ttatttgaag cttgcaattt gccatttgga actttttaat tggagcttgc aatttggcat
     5041 ttggaacttt ttctttggag cttgcgattt tgtgatttgg agcttttatc tcactcgtcg
     5101 ctcagtaaag ttttctgtca tgcgcacact aaaattttta ttacaaaaag aattcaggca
     5161 gatctttcgt gacccgtcca tactgcgcgt gatatttatc ctgcccgcgg tacaactgct
     5221 cataatgccc tgggcggcgg actatgaaat aaaaaatatt cgtttaagcg ttatcgatca
     5281 tgaccat
//
LOCUS       DASQJI010000302         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1569209,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000302 DASQJI010000000
VERSION     DASQJI010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569209"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VEV83_08480"
     CDS             complement(<1..202)
                     /locus_tag="VEV83_08480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45189.1"
                     /translation="MFRNYFKTALRNFQKNKILSLINLGGLSIGIAAVLLIGMYINDE
                     TSYDNFQANKESIYRVGFHFWQN"
     gene            complement(308..>2398)
                     /gene="nifJ"
                     /locus_tag="VEV83_08485"
     CDS             complement(308..>2398)
                     /gene="nifJ"
                     /locus_tag="VEV83_08485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HYK45190.1"
                     /translation="YLINSANFVACHHFQYLEKYDILKDVEHGATFLLNAPFPTEEVW
                     NNLPKKIQEEIIEKKLKLYVINASKVARETGMGSRINSILQTCFFAISNVMPKEEAIS
                     YIKKAIRKTYGRKGDEVVKKNFEAVDKALENLFLVDYSAYTIGEKEIEKAVTTNADDF
                     IQTVLAKIIAGEGDDLPVSAFPVDGTYPSATTRYEKRNIAEQVPVWDPQLCSQCGKCF
                     FVCPHAAIRPKVYSNGLLKDAPDFFKHTAPIGKEFFKDQESYTLQVAVEDCTGCSLCV
                     EVCPIESKTQPGHKAIDMKDILPLKETEKTNWDFFISLPDIDRTRVSRTTVKGSQLFE
                     PLFEFSGACSGCGETPYLKLLTQLFGDRMVVANATGCSSIFGGNLPTTPWAKNCEGLG
                     PAWANSLFEDNAEFGLGIKLATDMKRNYAISLLQTLREEVGGELIDAILSNTEAIEAD
                     VIKQRQNVNELKRRLKEIDKPEASQLSEVAEFLEHKSIWIIGGDGWAYDIGFGGLDHV
                     LSTGENVNILVLDTEVYSNTGGQKSKSSPIGASAKFSIKGKTTGKKDLAMQAIAHGGA
                     YVAEIAMGANDVHALKTILEAEAYPGPSLIIAYSHCIAHGYDMCHGLEQQNLAVKSGY
                     WPLFRYNPLKERGQRFVVDSKEPSIPMDEFLYHENRFATIKNNYPEKGVEFLAMANEG
                     MRRRLERIEALKAL"
BASE COUNT          609 a          552 c          493 g          744 t
ORIGIN      
        1 cattttgcca gaaatgaaaa ccgacgcgat atatcgactc cttattcgcc tggaagttat
       61 cataacttgt ctcatcattt atatacatcc caattagcaa cacagcagca atgccgatgg
      121 ataatccgcc gagatttatc agggagagaa ttttgttctt ctgaaaattg cgcagagcgg
      181 ttttgaaata attgcggaac atgacgtcag atagtttaga aattcacgat gactttcaaa
      241 ctaaaaagtc aagagtcaaa atttcgggaa ccgtctttga ctattgactt ttgattttta
      301 atttttttta caatgccttc aacgcttcga tcctttccaa acgcctgcgc atgccttcat
      361 tcgccattgc caggaattca actccttttt caggataatt atttttgatc gtagcgaacc
      421 ggttttcatg gtataaaaac tcgtccatag gaatggatgg ttctttgctg tcaactacaa
      481 atctttgtcc tctttctttt aacgggttgt aacggaacag aggccagtaa cccgatttga
      541 ccgcaagatt ttgttgctcc aatccgtggc acatatcata tccgtgcgca atacaatggc
      601 tgtatgcaat aatgagggaa gggcccggat atgcttccgc ttcaagaatt gtttttagcg
      661 cgtgcacatc atttgcgccc atcgcaattt cagcaacgta tgcgccgcca tgtgcaattg
      721 cctgcatggc taaatctttc tttcctgtcg tcttcccttt gatggagaac ttcgcgctgg
      781 cgcctatagg agatgatttt gatttttgtc cgcctgtatt tgaataaact tccgtatcaa
      841 gaacaagtat attcacattc tcccccgtcg ataatacatg atctaatccg ccaaagccga
      901 tatcgtatgc ccagccgtca cccccgatga tccaaataga tttgtgttcc agaaattcag
      961 ccacctccga taattgtgaa gcctccggct tgtcaatttc cttaagcctg cgcttcaact
     1021 catttacatt ttgcctttgt tttattacgt cggcttcgat ggcttctgtg ttcgacaaga
     1081 tagcatctat caactcgcca ccaacctctt ctcttaatgt ttgcaacaat gaaattgcgt
     1141 agttgcgttt catgtcggtt gccagcttga tgccgaggcc gaattcagca ttgtcttcaa
     1201 acaaagagtt cgcccaggcg ggaccaaggc cttcacagtt cttagcccat ggagttgttg
     1261 gtaaatttcc accgaagatc gatgagcagc cggtagcgtt agcaacgacc atcctgtcgc
     1321 cgaataattg tgtaagcagt ttgaggtagg gtgtttctcc acatccacta catgcccccg
     1381 agaattcgaa caacggttca aataactggg aacctttgac tgttgtgcgg ctcactcttg
     1441 tacgatctat gtcaggaagt gaaataaaga aatcccaatt tgtcttttcg gtttctttca
     1501 aaggaagaat atccttcatg tcgatcgctt tatggccggg ttgcgtttta ctttcgattg
     1561 ggcaaacttc tacgcaaagg ctgcagccgg tgcaatcttc cactgcgacc tggagcgtat
     1621 atgattcctg gtctttgaaa aattctttgc cgatgggagc agtgtgtttg aagaaatccg
     1681 gcgcatcttt caataaaccg ttgctgtaca ctttcggacg aatagcagca tgcggacaga
     1741 caaagaaaca ttttccgcat tgagaacata attgcgggtc ccacacagga acctgttctg
     1801 ctatatttct tttttcataa cgtgtcgtag cagacgggta cgtgccgtcg acagggaagg
     1861 cgctcacggg taagtcgtct ccttcaccgg cgatgatctt tgccagaacg gtttgaataa
     1921 agtcatcggc atttgttgtc acagcctttt caatttcttt ttcgccaatg gtgtaggcgg
     1981 aataatcgac aagaaacaaa ttttctaatg ctttgtcaac ggcctcgaaa tttttcttca
     2041 caacttcgtc tccctttctc ccataagttt tgcggattgc ctttttaatg taactgatcg
     2101 cttcttcttt tggcattacg ttggagattg caaagaagca cgtctgcagg atcgaattga
     2161 tgcgtgagcc catgcccgtt tcccgtgcta ctttcgatgc attgatcaca tatagtttaa
     2221 gtttcttttc gatgatctct tcctgtattt tcttcggaag attgttccag acctcttctg
     2281 tcgggaaagg agcattcaat aaaaatgtag caccatgttc aacatccttt agaatatcat
     2341 atttttccag gtactgaaaa tgatggcaag cgacaaagtt tgctgaatta ataagata
//
LOCUS       DASQJI010000303         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_187190,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000303 DASQJI010000000
VERSION     DASQJI010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187190"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VEV83_08490"
     CDS             <1..270
                     /locus_tag="VEV83_08490"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYK45191.1"
                     /translation="EYVFDRCDQFVLDQIAQRHYDLYLLCEIDLPWVAEPMREYPDLQ
                     QRSELYNMYKDILVNQQTPWVEIRGNNKERLQRAVDAVEQYFVQQ"
     gene            complement(274..1080)
                     /locus_tag="VEV83_08495"
     CDS             complement(274..1080)
                     /locus_tag="VEV83_08495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYK45192.1"
                     /translation="MNSVIQYFETIPSWHRALLIAGGISFFWLLESAIPLFQFDYNKW
                     RHAGVNIFFTVTTLVINFFFALLVVFSSAWCVQNGFGLLQWIAMPVWLELIVAFLVLD
                     LVSAWLIHFIQHKVNWMWKFHMIHHADTHVDTTTANRHHPGESIFRAAFTTLAVLICG
                     APMWLVLLYQTVSVAMSQFNHANIKMNRRFDKILSYVIVTPDMHRVHHHFIRPESDSN
                     FGNIFSFWDKLFGTYCTTPVENLHYGLDLLEGRNDEDLKDLLKIPFDKKL"
     gene            complement(1092..1661)
                     /gene="frr"
                     /locus_tag="VEV83_08500"
     CDS             complement(1092..1661)
                     /gene="frr"
                     /locus_tag="VEV83_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HYK45193.1"
                     /translation="MHSEEELELIIDDAEQSMNKAISHLEAELVKIRAGKANPNMIDG
                     IFVEYYGNPTPISQVANVVILDARTIGIQPWEKNMLQAIERSILQANIGITPQNDGNQ
                     IRLFLPPLTEERRKELFKRASAEGEHSKVAIRNIRRDAIEEIKKLQKDGLSKDIASDA
                     EDSIQETTNKYIALVDKHLAAKEKEMMAV"
     gene            complement(1715..>2904)
                     /locus_tag="VEV83_08505"
     CDS             complement(1715..>2904)
                     /locus_tag="VEV83_08505"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HYK45194.1"
                     /translation="LSLLRVLLTHNTKTCDMTQVATGIIIAYLITFFLLPLIIRIAHD
                     NKLYDIPDERKTHNYQVSSLGGIAIFTGLILSMLLVSDFNNYNADLQYFVAGFFIIFI
                     LGLIDDIFILKAWKKIFGQLAVTAMLTFKGGLLITDLHGFFGIYTLTNAESIYVSFFS
                     IILLINSFNLLDGVDGLAGSIGLVACLLFGTFFLINNVIPYAVLAFSICGSLLAFLVY
                     NFPPAKIFMGDSGSTLLGLVCSVLAIKFVQEPAIQANFLNHSAPAIAFGFLLIPLLDV
                     LRVIALRVYQSRSPLAPDRNHLHHLLQNKGLTHTEVTITLLTAEFLFAGMTLLLQNAD
                     IHLVLTAQFALFFGSVFILKQFIPVRRKLRIVREEAIADEKDDLKVYPIFPVKEKISR
                     TED"
BASE COUNT          860 a          625 c          648 g          771 t
ORIGIN      
        1 gaatatgtct ttgaccgatg cgatcaattt gtgttggacc agatcgcaca aaggcattac
       61 gatttgtatc ttttatgcga gatcgatcta ccctgggtgg cggagcctat gcgcgaatat
      121 cctgatttgc aacaaagatc agagctctac aacatgtaca aagatattct cgtcaaccag
      181 caaacaccat gggtcgagat acgtggcaac aataaagaaa ggttgcaaag agcagttgat
      241 gcggtggagc agtattttgt acagcaatga gtgctacagt tttttgtcaa atggaatttt
      301 cagaaggtct ttaagatctt cgtcatttct gccctccaaa aggtcgaggc cgtaatgcag
      361 attctcaacg ggcgtggtgc aatacgtgcc gaataattta tcccagaagg aaaatatgtt
      421 accaaaatta gaatcggatt cgggccgtat aaaatgatgg tgtactctgt gcatatcggg
      481 ggtcacaata acataagaca atattttatc gaagcgccgg ttcatcttaa tgtttgcgtg
      541 gttgaactgc gacatggcaa cgctcaccgt ttggtacaaa agaacaagcc acatgggagc
      601 accacaaatg agcacagcta acgtggtaaa ggccgccctg aatatgcttt cacccggatg
      661 atgcctgttt gcagtcgtag tatctacatg cgtatccgca tgatgtatca tgtgaaattt
      721 ccacatccaa tttactttat gctgaataaa atgaataagc catgcgctca caagatcaag
      781 cacgaggaag gcaacgatca attccagcca gaccggcatt gcgatccatt gcagaagtcc
      841 aaatccgttt tgcacacacc atgcgctgga aaacacaacc agtaaagcaa aaaagaaatt
      901 tattacaagc gttgtcaccg taaaaaaaat atttacacct gcgtgccgcc atttattgta
      961 gtcaaattga aacagtggta tcgcgctttc gagcagccag aaaaaactaa tgccacccgc
     1021 aatcaacaat gcgcggtgcc aggagggaat agtttcaaaa tattggatca ccgaattcat
     1081 tggtggagtt gtcaaacggc catcatttct ttttcttttg cagccaggtg tttgtcaaca
     1141 agcgcgatat atttattggt tgtttcctgt attgagtctt cggcatcact tgcgatgtcc
     1201 ttgctcagcc cgtctttctg aagttttttg atctcttcga tcgcgtcgcg gcggatgttg
     1261 cggatagcaa ctttcgaatg ttcaccttcc gcactcgctc tcttgaacag ttccttcctg
     1321 cgttcttcag ttaaaggcgg caagaacaaa cgtatctggt taccgtcatt ctgcggggtg
     1381 atcccgatat tcgcctgcag gatcgaccgt tcgatcgcct gtaacatatt tttttcccat
     1441 ggctggatcc cgatcgtgcg tgcatcgagg atcacaacat tagcaacctg gcttattggt
     1501 gtgggatttc cgtagtattc aacaaagatt ccgtcgatca tgttcgggtt cgccttacct
     1561 gcgcgtattt tcaccagttc cgcttcgaga tggctgatgg ctttgttcat tgattgctcc
     1621 gcatcgtcaa ttattaattc gagttcttct tcagaatgca taaagacaag tttgaatgga
     1681 acaaagctaa ggattcactt catagatcag gatttcaatc ttcggttcgt gaaatctttt
     1741 ccttcacagg aaaaatggga taaactttca gatcgtcctt ctcatcagca attgcttctt
     1801 ccctcacgat acgcagtttg cgacgtaccg ggataaactg cttcagtata aaaacggaac
     1861 cgaagaacaa agcaaattgg gcggtaagta caagatggat gtcagcgttt tgcagcaata
     1921 aggtcattcc tgcaaacaaa aattctgcag ttaataatgt gatcgttact tccgtatgtg
     1981 taagaccttt gttttgcaat aaatgatgaa gatgattccg gtcgggcgca agcggcgatc
     2041 tgctttgata aactcgcaga gcaattaccc ttaatacatc aaggagcggt attaataaaa
     2101 atccaaacgc aatggcaggc gcggaatggt ttaaaaaatt cgcttgtatg gcaggttcct
     2161 gcacgaattt tatagcaagc acactgcaaa caagaccaag cagtgtggat cctgaatcac
     2221 ccataaagat ttttgcaggc ggaaaattat acacgaggaa tgccagcagt gaaccgcaga
     2281 tcgaaaacgc gagcaccgcg taaggaataa cattgttgat caggaaaaaa gtaccaaaca
     2341 gcaaacaggc aacgaggcca atcgaacctg caagcccgtc aacaccatct aaaagattga
     2401 aagaatttat cagcagaatt atactaaaga aactgacata gatgctttcc gcattagtga
     2461 gcgtgtagat gccaaaaaat ccatgcaggt cagtgatcag cagcccgccc ttgaacgtta
     2521 gcatcgccgt taccgccaac tgcccaaata ttttcttcca ggcctttaag ataaatatgt
     2581 catcgatgag gcctaaaata aaaatgatga agaaaccagc gacaaagtat tggaggtcgg
     2641 cgttgtagtt gttgaaatcg gaaacaagca gcatgctcaa gatcaaaccc gtaaaaattg
     2701 caatgcctcc cagggatgag acctggtaat tatgcgtttt tcgttcgtca ggaatatcgt
     2761 agagcttgtt gtcgtgagcg attcgaatta tcaaaggcag caggaaaaag gtaattaggt
     2821 aagcaataat aattccggtc gcaacttgtg tcatgtcgca ggttttcgtg ttgtgcgtga
     2881 gtagaactct cagtaaagat aaac
//
LOCUS       DASQJI010000304         4954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1416575,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000304 DASQJI010000000
VERSION     DASQJI010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416575"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1035)
                     /gene="murF"
                     /locus_tag="VEV83_08510"
     CDS             complement(<1..1035)
                     /gene="murF"
                     /locus_tag="VEV83_08510"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HYK45195.1"
                     /translation="MSIHELYDIYSSHPSIQTDTRKLKEGDIFFALKGEKFNGNAFAQ
                     QALEAGASYAVVDEHAGTTGERLIHVEDVLSTLQLLAKMHREKFSIPFIAITGSNGKT
                     TTKELIHAVLASQFKTYTTQGNLNNHIGVPLTLLSIKSDAEFAVIEMGANHQKEIESY
                     CKIAQPTHGIITNCGKAHLEGFGGVEGVRKGKGELYDFIRDHDGLVFAYDDYDYLHEM
                     SRGIRKVIWYGTNNGEVCGEVKSSEPFLEVDIKKGIDAGLLRTQLVGSYNLPNVLCAA
                     TVGKYFNVPNKKISTSIETYVPSNSRSQLIEIRTNKLILDAYNANPTSMKAAIENFAR
                     MHEKNKVLILG"
     gene            complement(1164..1535)
                     /locus_tag="VEV83_08515"
     CDS             complement(1164..1535)
                     /locus_tag="VEV83_08515"
                     /inference="COORDINATES: protein motif:HMM:NF027349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4783 domain-containing protein"
                     /protein_id="HYK45196.1"
                     /translation="MKTIFTILGVVFSLTIFAQGNAVTSALKDGDAVKFSSYLAPTVD
                     IKLPGENEMKNINRTEAASIIQNFFSDHNITGVEVTSQREMSGTMYITGKLKDGNSDH
                     NITVMMKNKEGSMSVITVRIN"
     gene            1649..3181
                     /gene="gpmI"
                     /locus_tag="VEV83_08520"
     CDS             1649..3181
                     /gene="gpmI"
                     /locus_tag="VEV83_08520"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HYK45197.1"
                     /translation="MTSKRTIFIIMDGWGLGKIKSSDAIQHAKTPCVSSFYSTYPNST
                     LITCGEAVGLPEGQMGNSEVGHLNLGAGRIVYQELQRIHVAVRNGEFQQNEQLLATLD
                     YAKEHKKPLHLIGLVSNGGVHSHINHLKAICSVCKERGLNDVYIHAFTDGRDTDPKSG
                     LGFIEELQQHLNATVGKIASVSGRYYAMDRDKRWERVKLAYDAMVKGEGHKATDAVHA
                     IEQSYAANITDEFIWPTVILDEAQKPLATMQNGDAAICFNFRTDRCREITTALTQKDF
                     PEFDMHPLQLYYTTMTEYDKTFKGVHIIFDNDNLNNTIGEILERHGKKQIRIAETEKY
                     PHVTFFFSGGRETPFEGESRILVPSPKVATYDLKPEMSAYEVTDKLIPEIENETADFI
                     CLNYANADMVGHTGVWDAVIKAVETVDTCVGRVVNAALNHGYTIFLTADHGNADYEIN
                     EDGTPNTAHSLNPVPFFIIDQTWKGEVKAGKLADIAPTILSFMGLSLPKEMTGDILAS
                     DI"
     gene            3192..3698
                     /locus_tag="VEV83_08525"
     CDS             3192..3698
                     /locus_tag="VEV83_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding domain-containing protein"
                     /protein_id="HYK45198.1"
                     /translation="MKKVLLLLIVVLIVIQFFRPEKNIHAQPQPANISSVYPVPANVD
                     SILVKACDDCHSNNTRYPWYNNIQPVAWWLNHHVHEGKEELNFDEFATYTVARKYDKI
                     KEIKKNVDEGEMPLSSYTLIHKDARLTDAEKQALISWSENIRKQMEATYPKDSLERKR
                     GPGPPDGD"
     gene            3703..4347
                     /gene="yihA"
                     /locus_tag="VEV83_08530"
     CDS             3703..4347
                     /gene="yihA"
                     /locus_tag="VEV83_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HYK45199.1"
                     /translation="MEIKRAAYIISSPTVEQCPKPDRAEYAFIGRSNVGKSSLINMLC
                     NNSKLAKTSSSPGKTQLINHYAIESTSEKQAKRTHWYLADLPGFGYAKISQAQRKKWE
                     KMIQDYLRKRKNLVNIFVLIDGRHEPQQIDLDFINKLGDWELAFTIAFTKTDKEKPGA
                     LKHNINSFFDAMLETWQFLPQYFVTSALTKQGRKEMLDFIDESNKTFTMHEKTI"
     gene            4633..>4954
                     /locus_tag="VEV83_08535"
     CDS             4633..>4954
                     /locus_tag="VEV83_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HYK45200.1"
                     /translation="MDKKVRVRFAPSPTGGLHIGGMRTVLFNYLFAKHNNGTFVLRIE
                     DTDQNRFVPGAEDYIFECLKWCRLEPDESPFHGGSFGPYRQSERKNIYKQYAEQLVVQ
                     GNAYY"
BASE COUNT         1457 a         1067 c         1088 g         1342 t
ORIGIN      
        1 gccaaggatc agcactttat tcttttcatg cattcttgca aaattttcaa tggccgcttt
       61 catgctcgtt ggattcgcat tgtatgcatc gaggatcagt ttgttggtgc gtatttcaat
      121 gagttgagag cggctatttg agggaacgta agtttcaatc gatgttgaga tcttcttatt
      181 cggaacatta aaatattttc cgactgttgc cgcacaaagg acgttaggca aattgtagct
      241 gcccaccaac tgcgttcgca gcaagccagc atcgattccc ttttttatgt caacctccag
      301 gaatggctct gacgacttta cttcgccgca cacctcgcca ttgttcgtac cataccaaat
      361 gacctttcga atacctctgc tcatttcatg caaataatca taatcgtcat aagcaaatac
      421 aagtccatcg tgatcccgga taaagtcata aagttcacct ttccctttcc gaacaccttc
      481 aacgccacca aaaccttcga ggtgagcttt tccgcagttt gtaatgatac cgtgtgtcgg
      541 ttgagcgatc ttgcagtagc tttcaatttc tttttgatga tttgcaccca tttctatcac
      601 tgcaaattcc gcatcgcttt ttatactaag tagcgtaagc ggaacaccga tatgattatt
      661 aagattaccc tgggttgtat aagttttgaa ctgtgaagca agcacagcat gaatcaattc
      721 cttagtagtt gttttgccgt tgctgccggt tattgcgatg aacggaattg agaatttttc
      781 gcgatgcatt tttgcaagca attgcaatgt agaaagcaca tcttcaacat ggatcagccg
      841 ttcacctgtt gtcccggcgt gctcatcaac tacagcatat gaggcgcctg cctcaagtgc
      901 ctgctgcgca aacgcattgc cattgaattt ttctcccttc aatgcaaaaa aaatatcgcc
      961 ttccttcagt ttccgggtat ccgtttgaat tgaaggatga ctcgaataaa tgtcatataa
     1021 ttcatgaatg ctcaaaatgc gggtggtttg ccgcaagtta gaaagaaagg atgtaagatt
     1081 agtttgcggc atcgcagcaa cgcattgacg aacgaaacgg ctggtgtgag caaaaaaatc
     1141 ccccgaaaat cgggggaaac tttttaatta attctgacgg ttatgaccga catcgagcct
     1201 tccttatttt tcatcatcac ggtgatgtta tggtcgctgt tgccatcttt caatttcccg
     1261 gtaatataca ttgtgccgct catttcacgt tgtgacgtca cctcaacgcc ggtaatgtta
     1321 tgatctgaaa agaaattttg gatgatcgac gccgcttctg tcctgttaat gtttttcatt
     1381 tcattctcgc ctggcagttt aatgtcaacg gttggcgcca ggtagctgct aaacttaaca
     1441 gcatcgccgt ctttcaaagc cgacgtaacc gcattgcctt gcgcaaagat tgttaatgag
     1501 aacacaacgc caagtattgt aaagatcgtt ttcatatatg tttttccttt cggaaattcc
     1561 tccttgatag tagactaaag ataggactca ttgtttaaga aatttcgtta tgcaaatgtg
     1621 aaatacccaa attgtgtagc tttaccgcat gacgagcaag cgaacaattt tcatcatcat
     1681 ggatggctgg ggacttggaa aaattaagtc gtcggatgcc atccaacacg cgaaaactcc
     1741 ctgcgtaagc agtttttatt ctacctatcc aaattcaact ttgattacct gcggcgaagc
     1801 agtcggattg cccgaaggtc aaatgggcaa cagcgaggtc ggccatctta atttgggcgc
     1861 aggacggatc gtttaccagg agcttcagcg gatacatgtt gccgttcgca acggcgaatt
     1921 tcaacaaaac gaacaactgc ttgcaacatt ggattacgcc aaagaacata aaaagccttt
     1981 gcatttgatt ggccttgtga gtaatggcgg cgttcattca cacatcaatc atctaaaagc
     2041 catttgctcg gtttgcaaag aacgtggcct aaacgatgtt tacatccatg cgtttaccga
     2101 cggtcgtgac acggacccaa aaagcgggct cggatttatc gaagaacttc agcaacatct
     2161 gaatgccaca gttggaaaaa tagcgtctgt gagcggcagg tattatgcga tggaccgcga
     2221 caagcggtgg gaacgtgtga aactcgctta cgatgcgatg gtaaagggtg aaggccataa
     2281 agcaaccgac gccgtgcatg caattgaaca atcatacgcg gcgaacataa ctgatgaatt
     2341 tatctggccg acggtgatcc ttgatgaagc acagaagcca ttagctacaa tgcaaaatgg
     2401 cgacgcggcg atctgtttta atttccgtac agacaggtgt cgtgaaatta caacagcact
     2461 tacacaaaag gattttcccg agttcgatat gcatcctttg caattatatt acacgacgat
     2521 gactgaatat gacaaaacgt tcaagggtgt gcacattatt tttgacaatg ataacctcaa
     2581 caacacgatc ggcgaaattc ttgagaggca tggaaagaaa cagatccgga tcgcagaaac
     2641 agagaagtat ccccatgtaa ctttcttttt tagcggtgga agagaaacac cgtttgaggg
     2701 tgaaagcagg atactggttc cttcgccgaa ggttgccaca tatgatttga aaccggaaat
     2761 gagcgcttat gaagtgactg ataaattgat ccccgagatc gaaaatgaaa cagctgattt
     2821 tatttgcctg aactatgcga atgcggacat ggttgggcac accggtgttt gggatgcggt
     2881 gatcaaagca gttgaaacag ttgacacctg cgttggacgg gttgtaaatg ccgccttgaa
     2941 tcacgggtat acgatcttct taacagcgga tcatggaaat gcggactacg agataaatga
     3001 agacggaaca cctaacaccg cgcacagcct gaacccggtt ccttttttca taatcgacca
     3061 aacctggaaa ggagaagtaa aagcgggtaa acttgcagac attgcgccga ccatcttaag
     3121 ctttatggga ttgtcgttgc caaaagaaat gacgggcgac atcctcgcct ccgatattta
     3181 aaatcgccaa aatgaaaaaa gtactgctct tgttaattgt cgtgctaatt gttatacagt
     3241 ttttcaggcc agaaaaaaat attcatgccc aacctcaacc cgcaaatatc tcgtccgtgt
     3301 atccggtacc ggcaaatgta gattccatat tagtcaaagc gtgcgacgat tgccatagca
     3361 ataatacccg ttatccgtgg tacaataaca ttcagccagt ggcgtggtgg ctaaatcatc
     3421 atgttcatga aggaaaagaa gaactcaatt ttgatgagtt cgcaacgtat actgtagcta
     3481 ggaaatatga taagataaaa gaaattaaaa agaatgtcga cgaaggtgaa atgccgctct
     3541 catcatatac gctcattcat aaagacgctc gtttaacgga tgctgaaaaa caggcactca
     3601 tctcatggtc tgaaaacatc cgcaaacaaa tggaggcaac ttacccgaaa gatagtttgg
     3661 aaaggaaacg cggaccgggg ccgccggatg gagattaaat ctatggaaat taagcgcgca
     3721 gcatatatca tttcaagccc cacggttgaa caatgcccta aacccgatcg tgctgaatat
     3781 gcttttattg gcagaagcaa tgtaggcaag tcatcgctca ttaacatgct ttgtaataat
     3841 tcaaaacttg cgaaaacatc atcatctccc ggaaagacgc aactcatcaa tcattatgcg
     3901 atagaaagta cctcggaaaa acaagctaaa aggactcact ggtatcttgc cgatcttccc
     3961 ggttttggat acgcgaaaat ttcccaggcg caaagaaaaa aatgggaaaa gatgatccag
     4021 gactatttgc gcaaaaggaa aaaccttgtg aacatttttg ttttgattga cggcaggcac
     4081 gaacctcagc agatcgatct tgattttata aataagttag gcgattggga gttagccttt
     4141 actatcgcat tcacaaaaac cgacaaagaa aaacccggcg ccttgaagca caacatcaat
     4201 tctttttttg atgccatgct ggaaacgtgg caatttttgc cgcaatattt cgtaacaagc
     4261 gccctaacca aacagggaag aaaagagatg ctcgatttca tcgacgaatc caacaagaca
     4321 ttcacaatgc atgagaagac tatttgacat atttgtcgaa ttaatttttt ggcttgcgat
     4381 tttcgcttct ccccttgtat tcgccgctgc catcggactg ataatatata tttcacatga
     4441 agaattaaag tggctggcga ttttgatttg ttcaatagga ttcttatttg gcatttttgc
     4501 ggcaaaaagg atacggataa aatatggatg tgcagtggat atacgcaggt tattttcgtt
     4561 ggagaatgac taacgaggcg atataatgtc tcgttggctg ttgaacatcc cttctacgac
     4621 tacatttgca gaatggacaa aaaagtaaga gttcggtttg ccccgtcacc aactggcgga
     4681 ctgcatatcg gcggtatgcg cactgtgttg ttcaactatc tttttgcgaa acataataac
     4741 ggaacttttg tcctcaggat agaagataca gaccagaacc gttttgtccc gggcgccgaa
     4801 gattacattt ttgaatgcct gaaatggtgc cggctggagc ctgatgaaag cccatttcat
     4861 ggcggctctt ttggtccgta caggcaaagt gaacgcaaga atatttataa acaatatgct
     4921 gaacagctcg tcgtacaggg caacgcatac tacg
//
LOCUS       DASQJI010000305         2456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_187445,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000305 DASQJI010000000
VERSION     DASQJI010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187445"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2456)
                     /locus_tag="VEV83_08540"
     CDS             complement(<1..>2456)
                     /locus_tag="VEV83_08540"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase/phosphatase domain-containing protein"
                     /protein_id="HYK45201.1"
                     /translation="SLGIENNTVIIYTGDNGTPGKITEIVGDSIAMGQKGKTNELGTH
                     VPLIAYWPGTINAGTINNDLVDFTDFLPTLAGIANIPVPTTYGPLDGISFSPRLTGQP
                     GTPRDWIFCHYDPHPQRNKYRRWAQTATYKLYDTSSYNRQLLFYNISNDPRENKRLQD
                     TALTADEVSIKQQLLSVINSYRAQGIPLLSVAQPSLITDSTALASATIDINGGSTVAT
                     SGVVWSTSPGAGVPADNYTSETAQIGAFKSYMKGLSPNTMYYMRPYAVNFAGIGYGKE
                     KIFTTPLQPPHAITARGVNTTSFIAKWNSLTGAASYRLDVSTLQAFATLKKFTLTEGF
                     DNGTTPPSGWKISSGIIASSKRFGVTAPSLQFKATGQQVVTRILIGPATKLSFWLRAS
                     VPNAGGLLVQGFNGVIWRTIDSVINIPSNQSIIKSYDATSNPQLENDLTQFRFIYTIA
                     NGPVFFDDVSINYNKVTPSFVNGDSDLIVHDTSQQVTGLTANKTYYYRVRAVNENGAS
                     GNSNVISAKACNPPVITSVSTVNLNCAGNNSGMIQLSASGVPPLLYAWTGPGAFTSSI
                     NNISNLEAGTYKIILTAGNGCSTDSTVILTEPPTLLASANADPILCSGGTTNLIATAT
                     GGTGNYHYALSNSANNVTGPQDDNQFVVSSGTYVVTVTDDNRCSFTTDTIQIDEPPAL
                     TATASADMISCNGGTTTLTVTPQGGTGNYHYALSDGTGAQDDNHFTVAAGNYIVTVTD
                     NNGCSFTTDTLRVTEPQALTASASANPILCIGGTTILTVTAQGGTGNYHYTLSDSANN
                     TTGPQDDNHFTVTAGSYTAT"
BASE COUNT          617 a          547 c          568 g          724 t
ORIGIN      
        1 ccgttgcggt ataacttcct gccgtaaccg taaaatgatt atcatcctgg gggccggtgg
       61 tattattagc tgaatcggat aaggtgtaat gataatttcc tgtgccaccc tgcgctgtta
      121 cagtcaagat ggtcgttccc cctatgcata gaatcggatt ggcactggcg cttgcggtta
      181 aggcttgcgg ttcagtaacc cgcaacgtat cagtcgtgaa tgagcaacca ttattatcgg
      241 ttacagttac aatataattt ccagctgcca ctgtaaaatg attatcatct tgtgcacctg
      301 tgccatcgga caaagcataa tgataattac ctgtgccacc ctgcggtgtt acggtcagcg
      361 ttgttgtgcc cccgttgcaa ctgatcatat cagcgcttgc tgttgctgtc aaagctggtg
      421 gttcatcaat ttgtatagta tcagttgtga atgagcatcg gttgtcatcc gtcacggtaa
      481 ccacataagt ccccgaagaa actacaaact gattgtcatc ttgtggtcca gtgacgttgt
      541 ttgcagaatt tgataatgca tagtgatagt taccggtgcc cccggtggca gtggcaatca
      601 aattggtcgt gccaccactg cataggatgg gatcagcatt tgctgatgcc aacagggttg
      661 gcggttcggt taagataacc gtgctgtcag ttgaacatcc attgcccgcc gtcagaatga
      721 ttttataggt tccggcttcg agattgctga tattattgat tgatgaagta aatgcgccgg
      781 ggccagtcca tgcataaagt aaagggggta ccccactcgc gctgagttga atcatcccac
      841 tattgtttcc tgcgcaattt aaattgaccg tgcttacact cgtaattaca ggtgggttac
      901 atgcctttgc actgatcaca tttgaattac ccgaggctcc gttctcattc acggcacgca
      961 ctcgataata ataagtctta ttggctgtta acccggttac ctgttgcgaa gtatcatgca
     1021 cgatcaaatc gctgtcaccg ttaacaaacg acggagtaac tttattataa ttaatcgaaa
     1081 cgtcatcaaa aaaaactggc ccatttgcta tagtgtaaat aaacctgaat tgagtgagat
     1141 cattttccag ctgtggattt gatgtggcat catacgattt gataatgctc tggttagatg
     1201 gaatattaat aacgctatcg atagttctcc atataactcc gttaaatccc tggaccaata
     1261 aaccgcctgc atttggaact gaagcccgta accaaaagct cagcttcgtt gccggaccta
     1321 tcagaattct cgtaaccacc tgttgtcctg tagccttaaa ctgaagggat ggtgctgtta
     1381 caccaaatct tttgctgctg gcgattattc cggaactgat tttccacccg ctaggaggag
     1441 tcgtgccatt gtcgaatccc tcagttaagg tgaacttttt cagtgttgca aaagcttgca
     1501 gcgtacttac atccaacctg tagctggcag caccggttaa gctgttccac ttagcaatga
     1561 agctggtggt gtttacacct cttgccgtta ttgcgtgagg tggttgcaaa ggcgttgtaa
     1621 aaattttttc tttgccatag ccaatacccg caaagttgac cgcgtatggc ctcatataat
     1681 acatggtatt aggacttagt cctttcatgt agcttttaaa ggcaccaatt tgcgccgtct
     1741 ccgaagtgta attatctgca ggcactccag cacctgggct agtactccat accacaccgg
     1801 aagtggcaac ggttgagcct ccgttaatat caatagtggc gctcgcgagg gctgttgaat
     1861 cagtgatcaa tgacggttgc gctacagaca agagaggtat gccttgagct ctgtaactat
     1921 tgatgacgct taacaactgt tgtttaattg aaacttcatc ggcggtcaat gcggtatcct
     1981 ggagccgttt attttcccgt ggatcgtttg aaatattgta aaataaaagt tgcctgttgt
     2041 aagaagatgt atcgtataat ttgtaggtcg cagtttgcgc ccatcgcctg tatttgtttc
     2101 tttgaggatg aggatcgtaa tgacaaaaga tccaatcccg cggcgttcca ggctggcctg
     2161 ttaagcgagg ggagaagcta attccatcta acggaccgta ggtggttggc acaggaatat
     2221 ttgcgatgcc ggcaagtgtt ggtaaaaagt ctgtaaaatc aaccaggtcg ttatttatcg
     2281 ttccggcatt aatagtgccc ggccagtaag cgatcaaagg aacgtgtgta ccgagctcat
     2341 ttgtctttcc tttttgaccc atcgcaatac tgtcaccaac gatttctgta atcttaccgg
     2401 gcgttccgtt atctcctgtg taaataatga ctgtattatt ttctataccc aggctt
//
LOCUS       DASQJI010000306         4312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1108038,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000306 DASQJI010000000
VERSION     DASQJI010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4312
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108038"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VEV83_08545"
     CDS             <1..328
                     /locus_tag="VEV83_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45202.1"
                     /translation="LTAWSLSSSAQDKSTTVTGEVLDMHCYMSMDAHGDGHKSCAAKC
                     IQGGSPMGVLTSDGKVYLLLEDDAKKDAFDEAKKHAGEQVTVTGTVSEKDGIKAMVVS
                     DVKGKS"
     gene            complement(412..1605)
                     /locus_tag="VEV83_08550"
     CDS             complement(412..1605)
                     /locus_tag="VEV83_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45203.1"
                     /translation="MVRIAMLGSGFIGRFYADSLQGYRSKDKIVSVYSRTEKSAKKFA
                     EDYQCEHYTTNMEESIARANVDIVCIALPNNLHEDAVMLCCKHNKAVITTKPLGRNAA
                     EAARMLRAVEDAGIFNGYLEDLVYTPKFLKAFETVKNGGLGRILWAKSRETHPGPHSD
                     WFWNLELAGGGCILDLGCHCVEITRSYIGKDIKPMEVMCWADTQVKPIDAEDHAIALI
                     KYENGSIGQFEVSWTFRGGLDLRDEVMGTEGTIWVNNFLRTGFEMFVTGKGADYVSEK
                     AESNTGWLFPVGDELNELGYNHMFADMFNAYENGRPPKETFYDGYVVNAVLDAAYKSA
                     KTKQWEPVLLDTWRGRSGLSKESHLTEYDADHYLVKEEVTHYGAKKVILKNKKTGKIE
                     ELVLS"
     gene            complement(1998..2306)
                     /locus_tag="VEV83_08555"
     CDS             complement(1998..2306)
                     /locus_tag="VEV83_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HYK45204.1"
                     /translation="MIVRVWHGRTKTEDADAYREYVTKTGIADYHATPGNLNAQVWQH
                     PEGDITHIWTVSWWINIESIRAFAGRNYKKAKYYAEDKKYLLELEPTVQHYECFGKIR
                     "
     gene            complement(2340..3566)
                     /locus_tag="VEV83_08560"
     CDS             complement(2340..3566)
                     /locus_tag="VEV83_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015506 - nucleoside:proton symporter
                     activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015858 - nucleoside transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HYK45205.1"
                     /translation="MNSSVRIRLSALMFLEFFIWGAWYVTMGTYLDKVLHASGVQIGA
                     AYSAMAVATIFSPFFVGMIADRFFSAQKVLGVLHLAGAVLLYVLTTVDSPDLFYWIVL
                     LYSLMYAPTLALANSVAFRQMKDPGKEFASIRVLGTIGWIATGWLLDKVFHISEAELA
                     FTFKMAAVASVVLGLLSFFLPDTPPKGKGQAVTFKQILGADAFVLFKDSSFTIFFIAS
                     VLICIPLSFYYSLTNLFLNEAGMKNATSNMTFGQFSEAFFILLIPFFFRRLGVKWMIA
                     LGMIAWSVRFLFFSYGDGQANLWMLFAGIILHGVCFDFFFVTGQIYTDSKAGLNIQSQ
                     AQGMITMATYGIGMFIGTLLSGYVKDSYTVDKIVQWKSVWLVPAGIAAVVLVLFALFF
                     KDNRRSAVHAEPVAMV"
     gene            complement(3662..>4312)
                     /locus_tag="VEV83_08565"
     CDS             complement(3662..>4312)
                     /locus_tag="VEV83_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase subunit L"
                     /protein_id="HYK45206.1"
                     /translation="DELKNQITKTTSAYFEPALDYVIVKVPRWNFDKFKGANDTLGLQ
                     MKSVGEVMAIGRSFNEAIQKACQSLENEAVGLGYYGKSLMKSDELIDYIKTPKWDRIF
                     RIKDALMQGVTAKTIVQATQIDRWFIYQIQEIVRIEKEVAQYTLDDLPKELLKEAKQN
                     GFSDEQIARILRNRCTEEQVYERRKALGITRVYKMVDTCSAEFEAKTPYFYSSFEG"
BASE COUNT         1198 a         1039 c          860 g         1215 t
ORIGIN      
        1 ccttactgca tggagcttgt catcatctgc ccaggataaa agcacaactg taaccggcga
       61 ggtgctcgat atgcattgct atatgtcaat ggacgcgcat ggagacggcc ataaatcgtg
      121 cgccgcaaag tgcatccagg ggggttcgcc aatgggtgtt ctcaccagcg atggaaaagt
      181 gtatctcctc ctggaggatg acgcaaaaaa agatgctttt gacgaagcaa aaaagcacgc
      241 aggcgaacag gtgacagtta caggcactgt ttctgaaaag gacgggatca aagcgatggt
      301 cgtgagtgat gtcaagggaa agagctgata ctgctcttgt caaatttttt aaataaaaag
      361 aggttgatta tgatacaacc tctttttgtt tttattgatg ttaccgataa actatgaaag
      421 aaccagctct tctatcttac ctgtcttctt attttttaaa atcacttttt ttgctccata
      481 atgcgttact tcctccttta cgaggtaatg atccgcatca tattcggtca aatggctttc
      541 tttagacaac ccgcttcttc cgcgccatgt gtccagtaaa acaggttccc actgtttcgt
      601 tttcgctgat ttgtaggccg cgtcgagtac ggcatttacc acgtagccat cgtaaaaagt
      661 ttctttcggt ggcctgccat tttcatatgc attaaacatg tcagcgaaca tgtggttata
      721 tccgagttca ttgagctcat ctcccaccgg gaacagccat cctgtgttac tttcagcttt
      781 ttccgaaaca taatcggcac ccttgccggt gacgaacatc tcaaaaccgg tacgcaaaaa
      841 attatttacc cagatcgtgc cttccgttcc catcacttcg tcgcgaaggt cgagcccacc
      901 cctaaatgtc cagcttactt cgaattgccc gattgatccg ttctcatatt ttattaatgc
      961 tatggcgtgg tcctctgcat cgatgggctt cacctgtgta tcggcccaac acataacttc
     1021 catcggtttg atatcttttc ctatgtaact tctcgtgatc tctacgcagt gacaacccag
     1081 gtcaagaata caaccgcccc cggccaattc caggttccag aaccaatcgc tgtgcgggcc
     1141 gggatgtgtt tccctgcttt tggcccagag gatacggccg aggccaccat tctttaccgt
     1201 ttcgaaagcc ttcaaaaatt tcggcgtgta gacgagatct tcgagataac cattaaaaat
     1261 accagcatct tccacagccc tcaacatacg ggctgcctcg gctgcgttac ggcccaatgg
     1321 ttttgtggtg atgacggcct tattgtgttt gcaacataac atcactgcgt cttcgtgcag
     1381 attgtttgga agagcaatgc aaacgatgtc aacattggct ctcgcgatcg actcttccat
     1441 gtttgtggtg tagtgctcac actgataatc ttccgcaaat ttctttgccg acttctccgt
     1501 tcttgaatac acgctaacaa tcttgtcttt gctgcgatag ccctgtaaag aatcggcgta
     1561 aaagcggccg ataaaacctg atccaagcat agcaatacga accataaata atgattttta
     1621 agttaatagt taaaatgtct ccgatttatg tttatatcaa tttaaaaact gtgaataaac
     1681 gaacatttta cgtggattgc ctgtccaaaa cgcgtgtata aatgaacgta aaaaaatttg
     1741 gaaaaccata cttcaggata gtatttttac tgggtaagat tgatgtagat gtagaagccc
     1801 ggaattgtta ccatctcggt gataacaagg aaaggcggaa acgaaaacga aaatcttcag
     1861 attaggaact tcggttcctg gtcataaatc gaaaccccgg tttcgatttt cgaaggcaac
     1921 agggttagta agtaatttct gttgctttct tttttttata aacctataag gtttcaacaa
     1981 ccttataggt tttcttttta tcttattttc ccgaaacatt cgtagtgctg caccgtcggc
     2041 tccaattcaa gcaaatattt tttatcctca gcatagtact tcgccttttt atagttcctt
     2101 cctgcgaacg cccttatgct ttcaatgttt atccaccagg aaaccgtcca tatatgtgtt
     2161 atatcgcctt ccggatgttg ccaaacttgc gcattcagat ttcccggagt tgcgtggtag
     2221 tctgcaatac ccgtcttcgt aacatactca cggtaggcat cagcatcttc cgtctttgta
     2281 cgaccatgcc aaacacgaac gatcataatt tatgcgattg aattttttta gatgatatct
     2341 tagaccattg ccacaggctc cgcatgaacc gcactgcgtc gattgtcctt aaaaaataaa
     2401 gcgaataaaa caagcactac ggctgcaata ccggcgggca cgagccaaac cgatttccat
     2461 tgcacgattt tgtcgacagt ataactatct tttacataac cagacaacag agtcccgata
     2521 aacatgccta tgccatatgt tgccattgtt atcattccct gcgcctggct ttgaatatta
     2581 aggcccgctt tgctgtcagt atatatctgg ccagtgacga agaagaagtc gaaacagacg
     2641 ccgtgcaaaa ttattcccgc aaacagcatc cataaatttg cctgtccatc tccataacta
     2701 aagaaaagaa atcgcactga ccacgcgatc atgcctaacg cgatcatcca ttttacgccg
     2761 agccttcgaa aaaagaaagg aataagcaat ataaaaaacg cctccgaaaa ttggccgaaa
     2821 gtcatgttgc ttgtcgcatt tttcatacct gcttcgttca ggaataaatt ggtgaggcta
     2881 tagtagaaag atagcggtat acagatcagc accgaggcaa taaagaagat ggtaaaggaa
     2941 ctgtccttga acaacacgaa cgcgtccgcg cccaatattt gtttaaaagt tactgcttgc
     3001 ccttttccct tcggcggcgt gtcgggcaga aaaaaactta gcaggccaag tacgaccgat
     3061 gcaacagcag ccattttaaa agtaaatgcg agctccgctt cgctgatatg aaaaacttta
     3121 tcgagcaacc accccgtcgc tatccagccg atcgttccta aaaccctgat cgacgcgaat
     3181 tcttttccgg ggtctttcat ttgcctgaat gcaactgaat tcgcgagcgc cagtgtaggt
     3241 gcatacatta acgaatataa aaggacgatc caataaaaca agtcgggaga atcgaccgtg
     3301 gtaagaacat ataataatac agctcctgcg aggtgcagta caccgagcac tttttgcgca
     3361 gaaaaaaacc ggtcagcgat catgccaaca aaaaaggggg aaaaaatggt ggcaacggcc
     3421 atagcgctgt aggctgcgcc tatttgaacc ccacttgcat gcaatacttt atcgaggtac
     3481 gtacccatcg tgacgtacca cgcaccccaa ataaaaaatt caaggaacat caatgccgac
     3541 aagcgaatgc gaacagagct attcatataa ggttttgtga ataaaattaa aggagattac
     3601 tagcgcccac gctaaaggtt gaaaaaaaat ttgagaaggc gcggaaatcg ttaattgctg
     3661 cttacccttc aaacgatgaa tagaaatacg gcgtcttcgc ttcgaactca gcgctgcatg
     3721 tatctaccat tttataaaca cgtgtaatac cgagtgcctt tcgcctctca tacacctgtt
     3781 cctcagtgca gcggtttctt agaattcttg cgatctgctc atcgctaaaa ccattttgct
     3841 tcgcttcctt caagagttcc ttgggcaagt catcgagtgt atattgcgcc acctcttttt
     3901 caatcctgac gatctcttgt atctgataaa tgaaccaccg gtctatttgt gtagcctgca
     3961 caatcgtctt ggcagttaca ccctgcatca atgcatcctt gatccggaaa atgcggtccc
     4021 actttggggt cttaatataa tcgatcagtt cgtcgctctt catcaggctt ttcccataat
     4081 atcccaaacc cactgcttca ttttccaaac tttgacaagc tttttgtatt gcctcattga
     4141 agctcctccc aatagccatc acttctccca cactcttcat ttgcaatccc aaggtgtcgt
     4201 tcgcgccttt gaacttatca aaattccacc gcggcacttt tacaataaca taatcgagtg
     4261 caggttcaaa atatgcggaa gtagtttttg tgatctggtt ttttaattca tc
//
LOCUS       DASQJI010000307         2712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1877278,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000307 DASQJI010000000
VERSION     DASQJI010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1877278"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..614)
                     /locus_tag="VEV83_08570"
     CDS             complement(<1..614)
                     /locus_tag="VEV83_08570"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HYK45207.1"
                     /translation="MKGLNKPFQKFWAHDKSLTVLFFILIVQIFIAIPLGQKTAAGRI
                     IFSVFYISLLSAGMVFLVKNTTVRIVLIVLVASLTVLSSDIFFASASLGILDNSVAII
                     YCILLSWIVLLRTFSEGRITIHRIMGSIVVYLLISLMFTTIYHTVYLITGDDAFKGFS
                     SFDRKEFMYFSLTSLTTMGYGDLLPAAAFARSMANLEALIGQLYP"
     gene            complement(714..1814)
                     /locus_tag="VEV83_08575"
     CDS             complement(714..1814)
                     /locus_tag="VEV83_08575"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYK45208.1"
                     /translation="METTETTHVTTVETPPVTTRFQTRQIVHIAIQLLALGVLLYFCF
                     SVVSPFVNIVTWSAILAITLYPVHQKLKNAMGGRSALAATIITILMLLILIAPAVWVM
                     IRTGGELKGVISDYRAGNITIPPPAESVKSWPLIGNKAHGLWVQASSNLDSLIARNPA
                     QAKTVVGTTIGVLTSTAKGILFFTAAIIISGVFLSYSKQASTFARTLFNRLINSTKLD
                     MATISAITIRNVVKGILGVAFLQTVLAAGGMIFGGVPYAGVWALLCFILAVVQIGTLP
                     VAIGVIVYAWGAASTGTAIFLTIWMLAVGILDNILKPLVMGKGAPVPMLIIFLGAIGG
                     FMFTGFLGMFTGAVILSLGYRLFDIWLKGTEI"
     gene            complement(1936..>2712)
                     /locus_tag="VEV83_08580"
     CDS             complement(1936..>2712)
                     /locus_tag="VEV83_08580"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HYK45209.1"
                     /translation="VYAFSHGDVIADPSLPVADFKISAHSFGFGYVRTFALANKLARV
                     QVTAPLVFMAGDLKINGVDTSGARNGLGDARVRFGINLFGSPALDRRDFAQYQQKMIL
                     GASVVVSVPTGLYYKDKRINLGSHRWAIKPEVGISKRFKRVYAEAYSGVWFYTNNNQY
                     LINQTLEQRPVLSLQIHACYYFKNQMWVGLNTNWFNGGETLIEGAPAGNLQDNYRVGA
                     TWSVPVQKRHAIKLQFHVGAFTNTGYDYNIVSLGYQYLFF"
BASE COUNT          763 a          638 c          604 g          707 t
ORIGIN      
        1 ggatacaact gaccgatcaa agcttcgaga ttcgccatcg atctcgcaaa tgctgcggcg
       61 gggagaaggt cgccgtaacc catcgttgtc aggctcgtta aactgaaata cataaattcc
      121 ttacggtcga aagaactaaa ccctttgaac gcatcgtctc cggtgatcaa ataaacggtg
      181 tgatagatgg ttgtaaacat caaactgatc agcaagtaca ctacaatgga acccatgatc
      241 cgatgtatcg taatacgtcc ttcactgaat gttcgcaaca atacgatcca gcttagcagg
      301 atacaatata taatggcgac actgttatct aatattccaa gcgaagcaga tgcaaaaaaa
      361 atgtcagagc tgagcacggt gagggacgca actaaaacta tgagcactat tcttacagtt
      421 gtgtttttta cgaggaagac catacctgcc gacaacaggg aaatataaaa cacagaaaaa
      481 ataattcggc ccgcagcggt tttctggcca agtggaattg cgatgaagat ctgaacgatg
      541 aggataaaga aaagtacggt gagactttta tcgtgcgccc aaaacttttg aaatggcttg
      601 tttaaacctt tcatgcgtga agattgaagc tgtatttttc caacggactt ccagtcgcgg
      661 atttgtcagt ctttttggtg atgccattca aacgttatgc gaaatcgcag aaatcagatc
      721 tctgttccct tcagccatat atcaaagaga cggtatccca atgaaagtat aacggcgccg
      781 gtaaacattc ccaggaaacc ggtgaacata aatccgccta tcgcaccaag aaatatgatc
      841 agcatgggca cgggggcgcc ctttcccata accagcggtt tcaaaatatt atcgagtatg
      901 cctactgcca gcatccatat ggtgaggaat atcgctgtac ctgtgctggc tgcaccccac
      961 gcgtaaacga taacgccgat cgcgaccggc aaagttccga tctgcacaac agcaagaatg
     1021 aaacataaaa gtgcccaaac gcccgcatat ggaacgccgc caaatatcat acctccggct
     1081 gccagcacgg tttgcagaaa tgcgacgcct aaaattcctt ttactacgtt gcgaatcgtt
     1141 atggcagaaa tcgttgccat gtcgagcttt gtgctgttga taagccggtt aaataatgtt
     1201 ctcgcaaaag tcgatgcctg ttttgagtag gaaaggaaca cgccgctgat aatgatcgct
     1261 gcggtgaaaa aaagtattcc tttcgcagtg cttgtcagta caccgatggt tgtaccgact
     1321 actgtcttcg cctgcgcggg attcctggcg ataagcgaat cgagattcga agaggcctgc
     1381 acccacaacc cgtgagcttt gttgccgatc agtggccagc tttttacact ttcggcaggt
     1441 ggcggaatgg ttatgtttcc ggcgcggtaa tctgaaataa cacccttcaa ctcaccgccc
     1501 gttcttatca tcacccaaac agcgggcgct atcaggatca agagcatcaa gattgttatg
     1561 atggtagcag cgagtgccga gcggcctccc atcgcgtttt ttaatttttg atgaaccggg
     1621 tacaacgtaa tcgcgagaat tgccgaccac gtgacgatgt tcacaaacgg gctaacaacg
     1681 ctaaagcaga aatacagcaa cactcccagc gccagtagtt gtatggcgat atgcacgatc
     1741 tgccttgttt gaaaacgcgt tgttaccgga ggcgtttcaa ctgttgttac atgagtggtt
     1801 tcagttgttt ccataataat atgattgaga taagcagttt atttatttat caatgcaagt
     1861 attatcaatg caagcattta gcaagtaatg aatttattct ggtataatcc agcttttacc
     1921 gttaagtgac ccttgtcaaa agaaaagata ttgatagcct aatgatacaa tgttgtagtc
     1981 gtaccctgtg ttcgtgaatg cgcccacatg aaactgtaat tttatagcat gtcttttttg
     2041 aacgggtacc gaccaggtgg caccgacccg gtagttatcc tgcaggtttc cggctggcgc
     2101 gccttcaata agcgtttcgc caccgttgaa ccagttagtg ttcaaaccaa cccacatttg
     2161 atttttgaaa taatagcatg catgtatctg taaactcagt acaggccgtt gctcaagtgt
     2221 ttgattgatc aggtattgat tattgtttgt gtagaaccaa acaccgctgt acgcttctgc
     2281 atatacgcgt ttaaatcttt tcgatatccc tacttcgggc ttgatcgccc accgatgact
     2341 gccaagattt attcttttat ccttgtaata aagtcctgta ggaacagaca ccacgacgct
     2401 cgcgccgagg atcatttttt gctggtactg cgcgaagtct ctccggtcga gggctggtga
     2461 tccaaaaaga tttattccaa aacgtacccg tgcatcgcca agtccattac gcgcaccact
     2521 cgtatccact ccatttattt tcaggtcgcc ggccataaac accaatggag ccgttacctg
     2581 taccctggcg agtttattag caagggcaaa cgttcgtaca tacccgaagc caaaactgtg
     2641 tgcgcttatc ttgaaatccg cgactggaag cgacggatct gcaattacat cgccatgcga
     2701 aaatgcatat ac
//
LOCUS       DASQJI010000308        13593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1569688,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000308 DASQJI010000000
VERSION     DASQJI010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13593
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569688"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1610)
                     /locus_tag="VEV83_08585"
     CDS             complement(<1..1610)
                     /locus_tag="VEV83_08585"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45210.1"
                     /translation="MRSFIWLSLSCLLIAFSSFGQQNTGVSQAQMPNIIFILGDDIGY
                     YIPTVNGGQSYSTPNIDSMARHGMNFTHCEASPLCNPSRFMFLTGKYNFRNYSNWGYM
                     SDSEKTVANLMHDAGYVTGMFGKLQLQYKYARMQKWGWDRHMIFELIEDTVKFRRYKN
                     PVLMENGYRIPDSVTNGKYCDDILTQSILDFIDSNKSRPFFVYYSMSIGHEPFSPTPD
                     DPAFATWDPNQGVSAPVYFPSMVKYMDKKVGQILDKLRAAGLEGNTLVIYAGDNGTPV
                     PIKFIANGITMQGEKGKTTEGGTHVPLILYWPGQIAEGGINDDLADFTDFLPTFAEVA
                     KVADLSGYGTLDGASLFARINSHKNVKKQLFFHFDPFPGGYDTLQRWARNKNYKLYDS
                     TGSSKSGKFFNVANDVYETSPIPDSLLTANQLSTKQTLKHILDTVGTWPACPRLTNQF
                     ATNITSSSAVIGATIADAGASPLIDRGSNITTAKDGPYLSMNRLHAATVAVGTFSQKR
                     SGLSPQKLYKFDLYAMNKNLSHSTGFAYG"
     gene            complement(1890..3209)
                     /locus_tag="VEV83_08590"
     CDS             complement(1890..3209)
                     /locus_tag="VEV83_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45211.1"
                     /translation="METVNANQSQPKSDIKILVVDDREDNLFSIEAILSKDHYTIVKA
                     NSGRAALKILLREQDFSLILMDVQMPDLTGFETATIIYERDKLREVPIIFITAHNYDE
                     EFIFKGYSMGAVDYIYKPINPELLRVKVSVFVELYRKNQQLLLHEKKLLAVNRSLQRE
                     VEERKLSEEKIKLLNRQLIDNNAHLKAVNEELDRFAYVASHDLQEPLRKIMVFSDKII
                     AKNNGDVDTTKYFQKIIESSHRMQALINDLLSFSKHSVRSSDFQDVDLNSIIKECLTE
                     LEVEIERTNAQINFSQMPVISAVPSMMRQVFCNLVGNALKFRKPGTAPVIQIESELFK
                     PHDAFFPPKLNNGFKYYKISVSDNGIGFDPEYANEIFTVFKRLHSYHEFEGTGVGLSI
                     CKKIIENHCGFITAQSKVNEGSTFIIGLPQIQQRNNFSYQEIEKIQA"
     gene            complement(3216..9335)
                     /locus_tag="VEV83_08595"
     CDS             complement(3216..9335)
                     /locus_tag="VEV83_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HYK45212.1"
                     /translation="MKRKIKNPVPVNLHDEVISVKQDSPKPTNGKSKTKIHPTNLQFS
                     DELDMAELLKVLSAVKNGDFSARMAVDRIGVSGKICDTLNEIISLNETFVLELTLARN
                     TIGKQGHLNHRVELPRTARGSWHTSVDAINSLISDLVHPTIEIAHVISSVAKGNLSQE
                     MPLRIGDHLLLGEFAKIATEVNDMVKQLNLFSMEVTRVAREVGSEGKLGGQAKVKGVA
                     GVWKDLTDSVNQMAGNLTAQVRNIAEVTTAVAKGDLSKKITVDVQGEILELKNTINTM
                     VDQLNSFSSEVTRVAREVGTDGKLGGQAEVQGVAGTWKDLTDSVNQMASNLTGQVRNI
                     AQVTTAVALGDLSRKITVDVKGEILELKNTINTMVDQLNSFSAEVTRVAREVGSEGKL
                     GGQATVKGVGGVWKDLTESVNQMASNLTAQVRNIAEVTTAVAKGDLSKKITVDVQGEI
                     LELKNTINTMVDQLNSFASEVTRVALEVGTEGKLGGQARVQDVGGTWKDLTESVNQMA
                     SNLTAQVRNIAAVTTAVANGDLSKKITVNVEGEILELKNTINTMVDQLNSFASEVTRV
                     ALEVGTQGKLGGQAKVQGVGGTWKDLTDSVNQMGSNLTAQVRNIAEVTTAVAKGDLSR
                     KITVDVKGEILELKNTINTMVDQLNSFGSEVFRVAREVGSEGQLGGQADVPGVEGLWK
                     DLTDSVNKMASNLTSQVRNIAEVTTAVANGDLSRKIEVDVKGEILELKNTINTMVEQL
                     RAFASEVTRVAREVGTEGKLGGQANVPGVAGTWKDLTDSVNQMAGNLTAQVRNIADVA
                     IAVANGDMSRKITVDVRGEILQLKETLNTMVDQLRAFASEVTRVAREVGTDGKLGGQA
                     FVPGVAGTWKDLTDSVNQMTGNLTSQVRNIAEVTKAVQSGDLTKKVTIDVKGEIFDLK
                     NTINTMVDQLNSFAFEVTRVAREVGTEGKLGGQAEVQGVAGTWKDLTDSVNMMASNLT
                     NQVRGIAKVVTAVAIGNLKQKLSIVSRGEVAQLIDTINEMIDTLAVFADQVTTVAREV
                     GVEGRLGGQASVPGASGIWKNLTENVNQLAENLTTQVRAISEVASSVTKGDLTQMIRV
                     EAKGEVEELKDTINQMIINLKQTTLRNQEQDWLKSNLAKFTQMLQGQKDLNTVTRRIL
                     SELAQVVNAQKGMFYILEQEENFQNQKLKLFAAYAYGEEVHMSKEFRLGEGLVGQCAA
                     NKERILLTNVPRDYIKIASGLGEASPVNLIVLPVLFETEIKAVIELASFDSFSQTHLD
                     FLSQLTESIGIVLNTIEANSRTEDLLQQSQSLADELRRTNEELQDKAHLLVKQKEEVE
                     AKNKEVEEARRSLEEKAEQLQLTSKYKSEFLANMSHELRTPLNSLLILAQQLYENHEG
                     NLNEKQISYAKTIHSCGDDLIQLINDILDLSKIESGYISTDFVKVRFREVTSFVETTF
                     KHVSENKNLRFSIEVDEKLPDSLETDAQRLNQILKNLLSNAFKFTDKGEVKLRIYESD
                     RNWKQHNQNLENAQRVVAFEIKDTGIGISKDKQNIIFEAFQQAEGSTSRKYGGTGLGL
                     SISRGLADLLGGSIELNSEAGLGSTFTLFLPVDYNPVITRKEKQTTLKASEYKLAEGD
                     AAVVGSVPTVKVNDTKDLDVLNEIINETGDDRNNIISSDKVMLVVEDDLRFAKIMIEK
                     AHALNLKVVVATNFADVFDLTNKYDPIAVTLDIKLPDASGWRILDLFKNDLNFRHIPI
                     HLISGEENRLLAMHRGARSFHLKPLKTEDLNLLFADIVEYNERRPKKLLIVENNELDS
                     SRIVKVLENEKLIDIEITESGLTALGLIRENEYDCIIVDYMLPDIGGLEFLTDINLAK
                     KMHMTPVLIYSAKDFSPKEKTQLKQYSNRILLKDVNSLDVLLEETIMLLHIDYKELLP
                     AKRKLIENLRSKKDVLTNKKVLVVDDDVRNLFALTTAFEKYNIFSITAESGQEAMNIL
                     DENEDIDMVLMDIMMPEMDGYETTQKIRREHKNTALPIIAVTAKAMKGDREKCIEAGA
                     SDYITKPVKIDQLLSLMRVWLYK"
     gene            complement(9756..11285)
                     /locus_tag="VEV83_08600"
     CDS             complement(9756..11285)
                     /locus_tag="VEV83_08600"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45213.1"
                     /translation="MLKSACLLTTLVLLLNTITFSQAGTLDSTFSKDGVVEEQYAGGQ
                     KWQESSKAHSVAIQADARIVVAGDRWNGTEYDIGLARYQPAGIRDTSFGLSGQTVTDL
                     GNSDEAANAVAIQSDGKIVVAGYRYDKKNDRTDFLVVRYNEDGKRDGRFGENGVATTT
                     FGLDNSAANAIAMQSNGKIVVAGSAFIGAGNNNYFALARYKQDGTPDSSFGSDGKVTT
                     DFGVDAVACSVAIELDGKIVVAGYSGGFQPNDFTMTRYKSNGTLDSSFGANGKVFTDF
                     GGPEQGRSLAIQADGKILLAGNAINDFGLARYKPNGSLDSAFGINGKVVTDLGNDWSE
                     EASSVALQADGKIVVAGTSYSKFAVVRYLRNGQLDNSFGRKGKVLTDVGHGGAACQSL
                     ALQPDGKIVTAGYKGYKYAIIRYDGDPPLVSKADSKDAFYLPAIQLSPNPVKDILRVE
                     RLSSSTKTISVFDVKGNLVQRIITSNDNYTFNTKQFSAGIYFVKVVEADKAITLKFVK
                     Q"
     gene            complement(11371..13179)
                     /locus_tag="VEV83_08605"
     CDS             complement(11371..13179)
                     /locus_tag="VEV83_08605"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45214.1"
                     /translation="MTILTLFLVACMSLTGTICFSQPGTLDSTFGDDGKVTTAIHDGA
                     SALSVAIQGDGKIVLGGDSYESPFIYYFALTRYQTNGSLDSSFGVNGIVSTDLQPEEE
                     QGVSVAIQTDGKIVLAGTSFSFEKDFEVIRYYADGQLDTSFGNKGYVTTTFESENNLE
                     AMLIQPDGKILATGYAFNNVNYDIVLARYNTDGTPDQSFGDNGKIITDFGAFEKAMSL
                     GVQADGKIIVAGFYGLSFDDLTRDHDFLLVRYKPNGEIDTSFGSNGKVLADLGADDFA
                     YGLAMQADGKIIAAGKSGRHNFADFALARYNDDGSPDLSFGVHGNVLTDFDATNDAVR
                     SIKFQGDGKIVAAGFADYKYDHPRHRNFAIARYDPDGKIDSGFGTHGMVMTDFGSTAN
                     DAYSLAIQSDGKIVAAGVSDGGLFAVARYNNDGVLAVSIINVKAYSFGGRVQIDWTAL
                     NESNISQYRVERSVDGKNFISLGNVNALGNGQAKIDYTFTDFSPAIGDNFYRIESLSK
                     DGATNYTNTVKVNFAGNASSMVLSPNPARNILRIDGLSSSTKTISVLDATGKLLQQIT
                     TSNDNYVFNIKQLAAGLYFIRIEGGGETSTMRFLKE"
     gene            complement(13251..>13593)
                     /locus_tag="VEV83_08610"
     CDS             complement(13251..>13593)
                     /locus_tag="VEV83_08610"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45215.1"
                     /translation="TDFYPANGENFYRIKSISKDGVVKYTSVVKVNFVSASSSIVLSP
                     NPVKEILHIDGMSTVSKTILVSDVKGKLLQQVITSNNSYSFNTKNLAVGVYFVRINDG
                     DHTSTLKFIKE"
BASE COUNT         3360 a         3338 c         2758 g         4137 t
ORIGIN      
        1 ccataagcaa acccggtact gtggctaagg ttcttgttca ttgcatacag atcgaactta
       61 tacaattttt gaggagacag tcccgagcgc ttttgtgaaa acgttccgac agctacagtg
      121 gcagcgtgta accggttcat gcttagatat ggaccgtcct ttgccgtggt aatattagag
      181 ccgcggtcaa taagaggcga tgcccccgcg tctgctatgg tggcaccaat gacggcagat
      241 gagcttgtaa tgtttgttgc aaattgattc gtcaaccggg gacaggcagg ccatgtgccc
      301 accgtatcga gaatatgttt gagcgtttgt ttcgtggaca attggttcgc cgtcaacagc
      361 gagtcaggaa tgggcgatgt ctcatacaca tcgtttgcca cattaaagaa ctttccggat
      421 ttagatgaac ccgtcgaatc atacaattta taatttttat ttcgtgccca tctctgtagt
      481 gtatcatagc cgccgggaaa cggatcaaaa tgaaaaaata attgtttctt cacattcttg
      541 tggctattta ttcttgcgaa caaactcgct ccatccaatg tgccatagcc actcaaatca
      601 gcaacttttg caacctccgc gaacgtcggc aaaaagtcag tgaaatcggc caaatcatca
      661 ttgatccctc cttccgctat ttgtcctggc caataaagaa tgagcggcac atgcgtgcct
      721 ccttcagttg tctttccttt ttcgccttgc atagtaatac cgtttgctat aaacttgata
      781 ggcaccggcg tgccattatc gccagcataa atcacaagcg tgtttccctc taaacccgca
      841 gcgcggagtt tatccaaaat ttgaccgact ttcttgtcca tgtatttaac catcgaggga
      901 aaataaacag gcgcactgac gccctggttg ggatcccaag ttgcgaacgc ggggtcatcg
      961 ggcgttggag aaaacggctc atggccaata gacatggagt agtacacaaa aaagggcctg
     1021 cttttgttgc tgtcaataaa atccagaatg ctttgagtta aaatatcgtc gcaatattta
     1081 ccattcgtta cactatcggg tatgcggtat ccattttcca tgagaacggg attcttatac
     1141 cggcggaact tcacggtgtc ctctatcaat tcaaatatca tgtgtctgtc ccacccccat
     1201 ttttgcattc tggcatattt atattggagc tgaagttttc caaacatgcc tgttacgtaa
     1261 cccgcatcat gcattaagtt ggcgaccgtc ttttcgctgt cgctcatata tccccagttg
     1321 ctataattcc gaaaattgta tttaccagtc agaaacataa atcgggacgg gttacaaaga
     1381 ggcgacgctt cgcagtgagt aaaattcata ccatgcctgg ccatcgaatc gatattggga
     1441 gtggaatagg attgtccgcc gttcacggtg gggatatagt aaccgatatc atcacctaaa
     1501 atgaaaatta tgttaggcat ctgcgcttga gatacgccgg tgttttgttg tccaaaagag
     1561 ctgaatgcta tcaacaggca actcaacgaa agccatatga aacttctcat aaccaaaaat
     1621 ttttggatag gcagggcctg tcttgagggt taagattgta atgcgaggcg gcagcagtat
     1681 atccctttac gcctggtaat ttttattcgt ggccggtatt gtgctttatg aaaaacattc
     1741 gcttcgtctc cgcccgtaat aaatttagaa taaaaaaagt ataagcccaa acttttttgc
     1801 aacaaaaggg aatataaata gggacgtcag caattcatcg aagctataaa aacttttccg
     1861 ccaaatctca tttcaatgcc agatcgcgcc tacgcctgga tcttctcgat ctcctggtag
     1921 ctgaagttat ttcgctgctg tatttgaggt aaaccgatta taaaagtgga cccttcgttc
     1981 actttacttt gcgcggtaat aaatccgcag tggttctcaa ttatcttttt gcaaattgac
     2041 aggccaacgc cggtgccttc aaattcatga tagctgtgaa gccttttaaa gacggtgaat
     2101 atttcattcg catattcagg atcgaaccca atgccgttgt ctgaaacaga gatcttgtaa
     2161 tacttaaagc cgttattgag cttcggcgga aagaaagcgt cgtgcggttt gaaaagttca
     2221 gactcgattt gaattacagg cgcggttccc ggttttctga atttaagcgc attgcctacc
     2281 aggttgcaaa atacctggcg catcatgctg ggtacagcag aaataaccgg catctgtgaa
     2341 aagttgatct gcgcattcgt tctttcaatc tcaacttcga gctcggtaag acattcttta
     2401 atgatagaat tcagatcaac gtcctggaaa tcggacgagc gaactgaatg ttttgaaaaa
     2461 ctcaacaggt cattaataag cgcctgcatc cggtgtgacg actcaattat tttttgaaaa
     2521 tatttcgtgg tatcaacatc accattattt tttgcgatga tcttatcact gaacaccatg
     2581 atcttcctga gcggctcctg cagatcgtgt gaagcgacgt aggcaaaacg gtccagttct
     2641 tcattcaccg ctttcaaatg tgcattgttg tcgatcaatt gccggttgag taatttgatc
     2701 ttttcttcgg aaagttttcg ctcttccacc tcccgttgca acgagcggtt cacggccagc
     2761 aattttttct catgcagtag caactgctga tttttccggt acaattccac aaagacactc
     2821 accttaacac ggagcaattc ggggttgata ggcttgtaga tataatcgac tgcacccatg
     2881 gaatatccct tgaaaataaa ttcttcgtcg tagttatgag cggtgatgaa tatgatcggc
     2941 acctcgcgca gtttgtccct ttcataaatg atggtggccg tctcaaaacc cgtgaggtcg
     3001 ggcatttgca catccatgag gatcaaagaa aagtcctgtt cgcgaagcaa tattttcagc
     3061 gccgctctac ccgaatttgc ttttacgatc gtgtaatggt ccttactgag gatcgcctcg
     3121 atcgaaaaca aattgtcttc cctgtcatcc accacaagga tcttaatatc tgatttgggc
     3181 tgcgattgat ttgcgttcac tgtttccatc gtcatttatt tatacagcca cactctcatc
     3241 agtgacaata attggtcaat ttttacgggc tttgttatat aatctgacgc gcctgcttcg
     3301 atgcattttt cccggtctcc cttcatcgcc ttcgcggtca cggcaatgat cggcaaagca
     3361 gtattcttat gttcgcgcct tattttttgc gtcgtttcat aaccatccat ttcaggcatc
     3421 atgatatcca tcaagaccat atcaatatcc tcgttctcgt ctaatatgtt cattgcttcc
     3481 tggccacttt ctgctgtaat gctgaagatg ttatactttt caaaagcggt cgtcaatgcg
     3541 aagaggttgc gcacgtcgtc gtccaccacc aaaacttttt tatttgtcag gacgtctttc
     3601 tttgaacgaa gattttctat cagctttctt tttgctggta acaattcctt ataatcaatg
     3661 tgcagcaaca tgatcgtttc ttccagcaac acatccaacg aattcacgtc ctttagcaga
     3721 atgcggtttg aatactgctt cagctgggtt ttttcttttg gcgaaaaatc ttttgctgaa
     3781 tagatcagta cgggagtcat atgcattttc ttggcgagat tgatatcggt aaggaactcg
     3841 agaccgccaa tatccggcag catataatcg actattatgc agtcgtactc gttttccctg
     3901 atcagcccca gcgctgttaa accactttct gtgatctcga tgtctatcag cttttcattc
     3961 tcgagcactt tcactattct tgatgaatcc agctcattat tttcgacgat gagcagtttc
     4021 ttcggccttc gttcgttgta ttctacaatg tctgcaaaga gcaggttcag atcttctgtt
     4081 tttaatggct tcaaatgaaa gcttcttgct ccgcgatgca tagccagcag cctgttctct
     4141 tcgccggata tgaggtggat tggtatatgg cggaagttca gatcgttttt aaacaggtcc
     4201 aaaatgcgcc atccgcttgc atcgggcagt ttgatatcaa gcgttacagc tattggatca
     4261 tatttatttg tgagatcgaa cacgtcagca aaattcgttg ccaccacaac tttcaagttt
     4321 agggcatgcg ccttttctat catgatcttc gcaaaccgga gatcgtcttc aacaacgagc
     4381 atcaccttgt cgctgctgat tatattgttc ctgtcatcac ccgtttcgtt gatgatctca
     4441 ttcagcacat ccaggtcctt agtgtcattt actttcaccg tcggaacaga acccactaca
     4501 gccgcatcgc cttccgcgag tttatactca cttgccttca gtgtagtttg cttttccttt
     4561 cttgtaataa ccgggttgta atcaaccggc aggaataagg tgaaagtgct tcccagacca
     4621 gcttcactat tcaattcaat agacccgccc aacaaatctg ccagcccgcg gctgatagac
     4681 aacccaaggc cggtacctcc atatttgcgg cttgttgaac cctccgcctg ctggaatgct
     4741 tcgaaaataa tattctgttt atcctttgaa atgccgatac ctgtatcttt tatttcaaaa
     4801 gccacaaccc tttgtgcatt ctccaggttt tgattatgct gtttccagtt acggtcagat
     4861 tcatatatcc gcagtttaac ttctcccttg tcggtgaact taaatgcatt cgaaagaaga
     4921 ttttttaaga tctggttcaa acgttgcgca tctgtttcaa ggctgtcagg caatttttca
     4981 tccacctcta tactgaaacg cagattctta ttttcagaca cgtgcttgaa tgttgtttca
     5041 acgaatgatg taacttctct gaagcgcacc ttaacaaaat ctgtcgagat ataacctgac
     5101 tcgatctttg acaggtcaag gatatcgttg atgagttgga tcaaatcgtc tccgcaacta
     5161 tgaatggttt ttgcgtagct gatctgcttt tcattcagat tgccttcgtg attttcatac
     5221 aattgctgcg ctaatatcag caacgagttc aacggcgttc tcaactcatg cgacatattg
     5281 gccaaaaatt ccgacttgta ttttgacgtc aactgtaact gttctgcttt ttcttcaagc
     5341 gaccttctcg cttcttccac ttctttgttc ttcgcttcca cttcttcttt ttgtttaacc
     5401 aacaggtgag ctttatcctg caactcttcg tttgttcttc ttaattcgtc agcgagtgat
     5461 tgcgattgtt gcaacagatc ttcagtcctc gaattcgctt cgatagtgtt taacacgata
     5521 ccgatacttt cggtcaactg gctcaagaag tcaaggtgtg tttggctgaa agaatcgaac
     5581 gaggcgagtt caataacggc ctttatttcg gtttcaaaca ataccggcaa aacgatcagg
     5641 ttaaccggtg atgcttcgcc caggccggaa gcaattttta tataatccct tggaacgttt
     5701 gtcaataata ttctttcttt attagcagca cactggccca ccaatccttc gccgaggcga
     5761 aattcttttg acatatgcac ttcttcgccg taagcgtaag cagcaaagag ttttagcttt
     5821 tgattttgaa aattttcttc ctgttccagt atgtagaaca tccccttttg cgcattcacg
     5881 acctgggcaa gttctgaaag gatacgccgt gttactgtat tcaggtcctt ttgtccctgc
     5941 aacatttggg tgaattttgc aaggtttgat ttcagccagt cctgttcctg gtttctgagt
     6001 gttgtctgct taaggttgat gatcatctgg ttgatcgtgt ctttcaattc ttccacttca
     6061 ccttttgcct ccacgcgtat catttgagta agatctccct ttgttacaga agaagccact
     6121 tcggagatcg cgcgcacctg tgttgttaga ttttctgcga gctggtttac gttctccgtt
     6181 agattcttcc atatacccga cgcgcccgga acgcttgctt gtccgcctaa ccgtccttca
     6241 acgcctactt cgcgtgcaac cgtggttacc tggtcagcaa acactgcaag cgtatcgatc
     6301 atttcattga tcgtgtcaat caactgcgcc acttcaccgc gcgacacgat cgagagtttt
     6361 tgtttcagat ttccaatcgc caccgcggtc acaacttttg caatacctct tacctggttg
     6421 gttaggttcg atgccatcat gttcaccgaa tcggtaaggt ctttccacgt tcccgcaaca
     6481 ccttgtactt ccgcctgccc tccgagtttt ccttcagtgc ccacttctcg ggcaacacgt
     6541 gttacttcaa acgcaaatga gttcaactgg tcaaccatcg tgttgatcgt gttcttcaaa
     6601 tcgaagatct ctccctttac atcgatggtc actttttttg tcaagtcgcc cgattgcacc
     6661 gctttcgtta cttcagcaat atttcttact tgcgatgtga ggttacctgt catttggttc
     6721 acggaatcag taaggtcttt ccatgttcct gcaacacccg gcacgaatgc ttgtccacca
     6781 agtttaccat ccgtaccaac ttcacgtgca acacgcgtta cttcagacgc aaacgcacgc
     6841 aactggtcca ccatcgtgtt cagtgtttct ttcaactgca aaatttcacc acgcacatcc
     6901 acagtaattt ttcgcgacat gtcgccgttc gcaacagcga tcgcgacgtc agcgatattt
     6961 cttacctgtg ctgttagatt gcccgccatt tgattcaccg aatcagtaag gtctttccag
     7021 gttcccgcaa caccaggcac atttgcctga cctcccaatt ttccttcagt tcccacttca
     7081 cgcgccacac gtgttacttc ggacgcaaat gcacgaagtt gctccaccat cgtgttgatc
     7141 gtatttttta attcgaggat ctctcctttt acatccactt caattttgcg tgaaaggtct
     7201 ccgtttgcaa ccgccgtcgt aacttctgca atgtttcgta cctgcgacgt aaggttcgat
     7261 gccattttat ttacggaatc agtcaaatct ttccaaagcc cttccacacc aggcacgtca
     7321 gcctgcccgc caagctgtcc ttcagaacct acttcacggg ccacacggaa cacttccgaa
     7381 ccaaacgaat tcaattggtc caccatggtg ttgatcgtat tcttcagttc gagaatttcg
     7441 cccttcacat ccactgtgat cttgcgcgac aaatcccctt tagcaacggc cgttgttact
     7501 tcagcaatgt ttctcacctg cgcggtaaga ttagatccca tctggtttac tgaatcagtt
     7561 agatctttcc atgtaccacc cacgccttgc accttcgcct gtccaccgag cttaccctgc
     7621 gtacccactt caagtgccac acgtgttact tcagatgcaa atgagtttag ctgatccacc
     7681 atggtattga tagtgttctt caattcgaga atttctcctt cgacatttac tgtgatcttt
     7741 ttagaaaggt cgccgttagc aactgccgtt gttactgcag cgatgtttcg tacctgcgcc
     7801 gtaagatttg acgccatctg atttacagat tctgtaaggt ctttccatgt gccgcccaca
     7861 tcctgcactc ttgcttgtcc gccaagcttc ccttcagttc caacttcaag tgccacgcgt
     7921 gttacttcag acgcaaatga attaagctgg tccaccattg tgttgatggt gtttttcaat
     7981 tcaaggatct caccctgcac atctacggtg atctttttcg agagatcacc ttttgcaacc
     8041 gctgtagtta cttcagcaat atttctcact tgcgccgtaa ggtttgacgc catttgattc
     8101 acagattcag taagatcttt ccatacgccg ccgactcctt ttactgttgc ctgtccacca
     8161 agctttccct ccgaacccac ttcacgtgcc acacgggtta cttctgccga gaaagagttc
     8221 agctggtcca ccatcgtgtt gatggtattt ttcaattcaa ggatctctcc tttaacgtct
     8281 acggtgatct tgcgcgaaag gtctcccaaa gcaaccgctg ttgttacttg tgcgatattg
     8341 cgcacctggc ctgtgaggtt cgatgccatt tgattcaccg agtcggtgag atctttccag
     8401 gttccggcaa cgccctgtac ttctgcctgc ccgccaagtt ttccatctgt tcccacttcc
     8461 ctggccacac gcgttacttc tgaagagaat gaatttaact ggtccaccat cgtgttgatg
     8521 gtgtttttca attcaaggat ttcaccctgc acatccacgg tgatcttctt agataggtct
     8581 ccttttgcaa cggccgttgt tacttccgca atattgcgca cctgcgccgt aagattgcct
     8641 gccatctggt ttacggaatc agtaaggtct ttccatacac ccgcgacgcc tttcactttt
     8701 gcttgtccac caagtttacc ttcagaaccc acttcacgcg caacgcgcgt tacttccatc
     8761 gagaacagat ttaattgctt caccatgtca tttacttcgg tggcgatctt cgcgaattca
     8821 ccgagcaaca aatggtcgcc aatacgcagc ggcatttcct gtgaaagatt tccttttgcg
     8881 acggagctga tcacgtgcgc tatttcgata gtcggatgaa ccaggtcaga tataaggcta
     8941 ttgatggcat ccacgctcgt gtgccaggat ccccgtgcgg ttcttggcag ttccaccctg
     9001 tgattcaagt gcccctgttt accgatcgta ttcctggcaa gcgttagttc caggacaaat
     9061 gtttcattga gagaaattat ttcgttcaac gtgtcgcata tcttgccact gacgccgatc
     9121 ctgtccaccg ccatgcgtgc gctgaaatcg ccattcttta ctgccgataa aactttcagc
     9181 aattcggcca tgtcgagttc gtcagaaaac tgcaaattgg tagggtgaat tttggtcttt
     9241 gattttccgt ttgtcggttt tggtgaatct tgcttaacag agatcacttc atcgtgtaag
     9301 tttacaggca cgggattctt gatttttctt ttcatgaagt tttttttaaa tgatcggtcg
     9361 caaaacggtt ataaaaattg taaagaaaat ccctcaattt ggggaaaggt catcttagtt
     9421 ttttctggtt ttttcctgag tattccgatt tcaaaagcat gtattggcat agtttctagt
     9481 catctgttca tacaattgca gctttatttc tctaaatttt taatgtccgg cctatcaaaa
     9541 agtggcttca tagcaataag ccggtcgcta cagcaagagg aatccgctct acatttcctg
     9601 caaatattat cccaatgtta gaggatatat cggtgacgcc ggggaaacgg atctaagtaa
     9661 aataatcggg ccctctcaag tgaggcttag gaagtcacaa gctagcggga tctcaaattc
     9721 aacggtccat aagttcaccg ggacatgact caatgttatt gcttaacaaa cttgagtgta
     9781 attgctttat ctgcttcaac aacttttaca aaatagatcc ctgcggaaaa ttgttttgtg
     9841 ttgaatgtat aattgtcgtt tgatgttatt atccgctgca ccaaatttcc ttttacatca
     9901 aaaaccgaaa ttgtttttgt ggaagatgac aaacgttcta cacgcaaaat atctttgacc
     9961 ggattcggag aaagctgaat ggccggaaga tagaacgcat ctttgctatc agcttttgaa
    10021 acaagcggcg gatcaccgtc atacctaata atcgcatatt tatacccttt atatccggct
    10081 gttactattt ttccgtcagg ctgcagtgcc agtgattgac acgcagcgcc gccgtgtccg
    10141 acgtcagtta gcaccttacc ttttctgcca aaagaattat cgagctggcc attacgcagg
    10201 tatcgcacca cagcaaattt ggaataagag gtaccggcaa ccacaatttt tccgtctgcc
    10261 tgtaatgcaa ctgaggaagc ctcttcagac caatcgtttc ccagatctgt gactactttc
    10321 ccgttgatgc caaaggcgct gtcaaggcta ccgttcggct tgtaccgcgc caaaccgaag
    10381 tcattaatgg cgttgcctgc caaaagaatt tttccgtcgg cctgtatcgc aagtgatcgg
    10441 ccctgctcag gtcctccgaa atcagtaaac actttgccgt ttgcgccaaa agagctatcc
    10501 agcgttccgt ttgatttata ccgcgtcatt gtaaaatcgt tcggctggaa tccgcccgaa
    10561 taacctgcca caacaatctt cccatcaagc tctatcgcaa cagaacatgc cacggcatcg
    10621 actccaaaat ctgtggtcac tttaccgtcc gaaccaaagc tgctgtcagg tgttccatcc
    10681 tgcttgtatc gggctaaggc aaaataatta ttatttccgg cgccaataaa ggcagaaccc
    10741 gccacaacga tcttcccatt cgactgcata gcaatagcat ttgctgcact attgtcaagg
    10801 ccaaaagtgg tggtcgctac tccattttca ccgaaccttc catcgcgctt tccatcctcg
    10861 ttatatcgga ccacaagaaa atctgtgcgg tcgttttttt tgtcgtaccg ataaccggcc
    10921 accacgattt tgccatctga ttgtatggcg actgcattcg ccgcctcatc gctattaccg
    10981 agatctgtaa ctgtttgacc gcttagtcca aaagaagtgt cgcgaatccc agctggctgg
    11041 taacgcgcca ggccaatatc atattccgtc ccgttccagc ggtcacctgc aaccacgatc
    11101 ctagcgtcgg cctgtatcgc gaccgaatga gctttcgaac tctcttgcca tttttggccg
    11161 cctgcgtatt gttcttccac tactccatct ttactgaacg ttgaatcgag cgtaccggct
    11221 tgtgaaaaag taattgtgtt taataacagc acaagcgttg taagaaggca agctgacttg
    11281 agcatgatgt ttgtttttgg ttgagaaaaa attggaacag taaaaacgtt ttggagacta
    11341 actggctgaa gctttgaagc atccatatgc ttactctttc agaaatctca ttgttgaagt
    11401 ttcgccacca ccctcaattc taataaaata tagtcccgct gcaagttgtt ttatattgaa
    11461 tacgtaattg tcgtttgatg ttgttatttg ctgtaacaat ttcccggttg catcaagaac
    11521 ggaaattgtt tttgtggaag atgacaggcc gtcaatacgc aaaatattcc ttgcaggatt
    11581 cggtgaaaga accattgaag atgcattgcc tgcaaaattt acttttactg tgttggtgta
    11641 atttgtcgct ccatcttttg aaagagattc gatacgatag aaattatcac cgattgctgg
    11701 tgagaaatct gtaaaggtgt aatcgatttt tgcctgtccg ttacccagtg cgtttacatt
    11761 tccaagacta ataaaatttt tgccatcaac tgagcgttcg acgcggtatt gagagatgtt
    11821 cgattcgttt aaagctgtcc aatcgatttg cactctgccg ccaaaggaat aggcttttac
    11881 atttatgatg cttaccgcga gaactccatc attattatat cttgctacag caaaaagtcc
    11941 gccgtctgag acaccggctg caacaatttt tccgtcactc tggattgcga gcgagtaggc
    12001 gtcatttgca gtgctcccaa aatccgtcat taccatgcca tgagttccaa atccactatc
    12061 gatttttccg tccgggtcat aacgggcaat ggcgaaattc ctgtggcgcg gatgatcata
    12121 tttataatca gcaaaacctg ccgcgactat ttttccgtcg ccttggaatt ttattgaacg
    12181 gacggcgtcg tttgttgcat caaaatcagt cagaacgttt ccatgaacac caaaactcag
    12241 atccggactt ccgtcgtcat tatacctcgc taatgcaaaa tctgcaaaat tatggcgccc
    12301 cgatttgcct gcagctataa tcttgccatc ggcctgcata gctagtccat acgcaaagtc
    12361 atccgctccg aggtcggcaa ggactttacc atttgatcca aagcttgtat ctatttcgcc
    12421 atttggctta taacgcacca gcaagaaatc gtgatcccgt gtgaggtcat cgaacgacaa
    12481 gccataaaac ccggctacaa taatttttcc atcagcctgc acgcctaggg acattgcctt
    12541 ttcgaaagcg ccgaaatctg ttataatttt tccgttgtca ccaaacgact ggtcaggggt
    12601 gccatcggta ttatatcgcg ctaaaacaat atcgtagttc acgttgttaa aggcataacc
    12661 cgttgccagg atctttccgt cgggttgtat taacatggcc tcaaggttgt tctctgattc
    12721 gaaagtagtg gttacgtagc ccttatttcc aaaagaggtg tctaactgtc catcggcata
    12781 atatctgatg acttcaaaat ccttctcgaa actaaaggaa gtacccgcca gaacgatctt
    12841 gccatccgtt tggatagcca ccgacacccc ttgctcctcc tccggttgaa gatcagtaga
    12901 aacgatccca ttaactccga aactgctgtc cagcgagccg ttcgtttgat agcgagttag
    12961 ggcaaaataa tatatgaatg gtgattcata actgtcacct cccaaaacga tctttccgtc
    13021 gccttgtatc gctactgaca aggcagacgc tccgtcatga atggctgttg tcactttgcc
    13081 atcgtctcca aaagtagaat cgagggtgcc gggctgcgaa aaacaaatag tgccggttaa
    13141 cgacatgcac gcaactaaaa acagagtaag aattgtcata gtatttattt gtggttgata
    13201 aacaaataat ttacgatatc ggtctgacgc gacagcgtct gagtgcgttc tcattcttta
    13261 ataaacttca acgtgcttgt atgatcgccg tcattgatcc ttacaaaata gactccgaca
    13321 gcaaggtttt ttgtattgaa tgaatagctg ttgtttgatg ttattacctg ttgcaacagt
    13381 tttcccttta catcactaac taaaattgtt tttgacacag ttgacattcc atcgatatgc
    13441 aaaatttctt tcaccgggtt tggagaaaga acgatcgacg atgaggcgct tacaaaattt
    13501 acttttacaa cacttgtata ttttaccacg ccatcttttg aaatcgactt gatgcggtag
    13561 aaattttctc cgtttgcagg gtagaaatct gtg
//
LOCUS       DASQJI010000309         6009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_33829,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000309 DASQJI010000000
VERSION     DASQJI010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6009
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33829"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VEV83_08615"
     CDS             <1..338
                     /locus_tag="VEV83_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45216.1"
                     /translation="QVDLIAQWINEGAQNTTNCSNRCDTSLYTYSSAVRPILDLHCIG
                     CHNNSTQNGGVDLTTYTGVQTVAVNGKLAGTINWDPGYPPMPQGGTQLSECNITQIMK
                     WITAGAPNN"
     gene            347..739
                     /locus_tag="VEV83_08620"
     CDS             347..739
                     /locus_tag="VEV83_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45217.1"
                     /translation="MIIKKILASAVLLTVIVLFNSCFYDKSEQQYPAGACDTTRVSYN
                     ADVMAILDASCQGCHKGPSATSGINLYDYITIKSLALDGKYTYGSLLSSVSHEGGNPN
                     PMPQGANKLQECDINKIRAWVNMGAPAN"
     gene            880..1809
                     /locus_tag="VEV83_08625"
     CDS             880..1809
                     /locus_tag="VEV83_08625"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HYK45218.1"
                     /translation="MKTLLKIFVLVNVLVCTHTYAQNINVDSLLDAGNSEKNQSKKQY
                     TGATFASTRLIDGHTVETTQGGVLDLKISHRFGRLNEGFYNMFGLDAASMRIGLDYGI
                     TNRLTIGGGRSTFEKQYDGFLKYRLLWQSEGERSLPLSVTLLTSVMYETDTAAVKAEK
                     NIYLQPRTTDKLSFAYQMLIARKFSESFSLQLMPTMIHENIVDSVTTPNDLFAVGAGA
                     RLRLSPRSNLNLEYYYQLPGYKLPGTYNTFSVGYEIETGGHVFQLHVSNSTGMTERTV
                     ISENKGQWQAGDIHFGFNISRVFTVKKARSPKL"
     gene            2512..2973
                     /locus_tag="VEV83_08630"
     CDS             2512..2973
                     /locus_tag="VEV83_08630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45219.1"
                     /translation="MKRNHLTTLYLVAVAAIIGMSSCTKENASAPPPQTQANNLNEDV
                     LQSGEVSSAVVVPGIYSILKFIDTGNDITTDYSGYTFDFQSGGTLVATKNGVTYTGTW
                     KENSAQTKMAISISGTAALKNLSDDSWKIVLITDHRISLKKAGPDKVIFVM"
     gene            complement(3190..4863)
                     /locus_tag="VEV83_08635"
     CDS             complement(3190..4863)
                     /locus_tag="VEV83_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45220.1"
                     /translation="MIRKFLLAAFLLLEFSSAFAHVGSSDVVLEGMAGAYHVLVHIKP
                     PGAIPGTATVTVYVSNGSGASAYARTMYFSYGENGSPSAERLENVTDHPGQFEGIVWL
                     MDNGSASIDLTVDGPLGKGQLLVPVMAVSTTEQKLPAGTAGVLIVFGLFLFVLLITIA
                     GLSVSDAVTKSGTPIPANRKRNRRIAVAIAAVVCITALYAGNLWWQTKAKIYSKYLFR
                     PMHANYQVEHKNGMNELHLAIDTTNSQRKEILPYIVPDHGKIMHLFIIRFPGMDVLAH
                     LHPERTDLLHFTTELPNLPAGRYLAYADVVYNSGFTETMKDTFVVNAPLAKTDFQDSI
                     ISDHDDAFALAARFVPGQNEGNVSANSAGRSVSFDGTTIRLEQPKDNSNYRSGDVSIL
                     RFSVWDKNGSAVKPDLYMGMPGHAMIVRDDGNVFAHIHPVGTYSMAAQSSLLDRMSLP
                     ANEYNYPDGNLFRDSIDRLVNDLRHMTEEERNERLVQEMKMPGMSADKQMNLKMPAMA
                     DDPMIKGMNDGDNIVSFPFTFPSAGKYRIWVQVKINGQILTAAFDRNVR"
     gene            complement(4901..>6009)
                     /locus_tag="VEV83_08640"
     CDS             complement(4901..>6009)
                     /locus_tag="VEV83_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45221.1"
                     /translation="YLLTVACFLITGGILWDISWHQSIGRDRFLTPPHIVVYLGAILG
                     ALSSGTHVMINSFSAKAQKDAYVKLWGIFYSSFGALFCIWGAIAMLTSAPFDNWWHTA
                     FGLDLQILSPPHSLLLAGIFSMQTGTCLWIIKYINLTSPNNRSIRPLQFLLVVTAATF
                     LCMVYTLAISYVRVSSMRDARFYQSVTVITLLLLPGFGKALRLKWGMTAIACCYFLIS
                     ACSNWILQIFPAEPKLGPILTHTTHFQPGNFPLLIMVPAYFMDLLLQKFKGNDWIRAA
                     CLSMIFVLTLVTIQYPFSGFLRESPSSRNWFFGGDAWYYQNPPDAPFRYKFSPTEIQP
                     LPFFAVGILIAIVLGMLVTLLSLTWGKWMLHIRR"
BASE COUNT         1809 a         1352 c         1328 g         1520 t
ORIGIN      
        1 accaggtgga cttaattgca caatggatca atgaaggtgc tcagaacaca acaaattgtt
       61 ctaaccggtg tgatacttct ttatatactt attcgtcagc ggtaaggccg atacttgacc
      121 tgcattgcat aggctgtcat aataactcaa cacaaaatgg cggcgtagat ctaacaacat
      181 atacaggcgt acagactgtg gcagttaacg gaaaactcgc gggtacgatc aattgggatc
      241 ctggctaccc tcccatgcca cagggcggaa cgcaacttag tgagtgtaac attacccaga
      301 tcatgaaatg gatcaccgca ggcgcgccga ataactaatc aatcctatga ttattaaaaa
      361 aattcttgcc tcagcagtac tgctgacagt aatcgtattg ttcaatagct gcttctatga
      421 taaatcggaa caacaatatc ctgcgggcgc ttgtgataca acacgtgtaa gttacaatgc
      481 cgatgtcatg gcaatactcg atgcaagttg ccagggttgt cacaaaggac cttccgccac
      541 aagcggtatt aacctgtatg attacatcac aattaagtcc ctggcgttgg atgggaaata
      601 tacctatggc tcgttgctat cgtctgtttc tcatgaaggc ggaaatccca atccaatgcc
      661 ccagggcgca aacaaacttc aggaatgcga cattaataaa atcagggcgt gggtaaacat
      721 gggtgcacca gccaattaac acgcaataaa aaaattattg ctttaaaata aaattcagtg
      781 caataattct cattgcaaca agagctttta tttgcccgtg agatgaaaaa aattattgca
      841 gcagcattac cagcttacat caaacaataa aactttttca tgaaaacctt actgaaaata
      901 ttcgtgttgg ttaacgtatt agtttgcacg catacatatg cgcagaatat aaatgtcgat
      961 tctttactgg acgcgggaaa cagcgaaaaa aatcaaagta agaaacaata taccggagca
     1021 acatttgcaa gcacgcgcct gatcgacggg cacacggtgg aaacaacgca gggcggcgtg
     1081 ctcgatctga aaatatcgca tcggtttgga agattgaacg aaggcttcta taatatgttc
     1141 gggcttgatg cagcttccat gcgcattggc cttgattatg gcataacgaa tcgcttaaca
     1201 ataggcggag gaaggagcac ctttgaaaaa caatatgatg gatttctaaa gtaccggctg
     1261 ctgtggcaat ctgaaggcga gcgcagtctg ccgttatcgg tgaccttgct cacatcagta
     1321 atgtatgaaa cagatacggc ggcggtgaaa gcagaaaaaa atatttacct gcagccacgc
     1381 actacagata agttatcgtt tgcatatcaa atgctgattg caagaaagtt tagcgagagc
     1441 ttctcgttgc aactgatgcc tacaatgatt catgaaaata ttgttgatag cgtaacaacg
     1501 cccaatgatc tttttgcggt tggtgccggc gcacgattgc ggttaagccc gcgaagcaat
     1561 cttaatttgg agtactatta ccaattgccc ggttacaaat tacccggaac gtacaatacg
     1621 ttttccgttg ggtacgaaat agaaacgggc ggccatgtct tccaattgca cgtaagcaat
     1681 tcaacaggta tgacagaacg cacggtgata tcagaaaaca aagggcaatg gcaggcaggc
     1741 gacatacatt tcggctttaa tatttcccgc gtgttcacgg taaagaaagc aaggtcacca
     1801 aaattatgat agtgcccgcc cttcatgttt gttggaaaaa ttccactaag gtgatccatg
     1861 ccgcagtaat ctactggtgc tcaacacccg gctttattgg tatgcccttt gcgcgttgtg
     1921 atgggacgcg accttgaatc gccggaatca gatcggtttc aacctgtttt accatgccga
     1981 ccactagcat agaaagtcag attcaaaacc tggaactcca gttacagctg caggaatcaa
     2041 actacaggta cgcgatggag ttaaagaagg actttgctgt tctcaggcgc gtaaggtaca
     2101 atatcaaagc gctcagagaa ctgctgcaat ctctgaaaga attttccagg tgcgaaaaac
     2161 gcaacttgcc cggcaattat atatttaaag acaatagcat cacagcattt cgcaaatacc
     2221 catctccgtc ttttcgaaaa aaggattgga ggttgaggaa taaccgcgag aaataagagc
     2281 gccaaatatt tgacttttca aaacaacagg cactgcgccg tatatcctta gaccaatgag
     2341 aacttgatta cgttttttag ttgatcgagt tccaaaagtt tttaaaatca acggtcaaaa
     2401 aaattcagag cagataaatt ccggttcacc ttgcaattct tcccgtcggg cttacattct
     2461 ttgtacaatg ttttcattaa accaatcttt gggttctaaa atttattact catgaaaaga
     2521 aatcatttaa ccacgttgta tctcgttgct gtcgcagcga tcattggaat gtcatcatgc
     2581 acaaaggaaa atgcaagtgc acctccaccg caaacacagg caaacaattt gaacgaagat
     2641 gttttgcagt caggggaagt tagttccgca gtagttgtac cggggattta ttcaattttg
     2701 aaattcattg acaccggtaa cgatatcact acggactatt ccggctacac atttgacttt
     2761 cagtcaggcg gaactttggt ggctaccaaa aatggtgtca cttacacagg cacatggaaa
     2821 gaaaactctg cccaaacaaa aatggcgatc agcataagcg gcactgcggc gctgaagaat
     2881 ttaagcgacg acagctggaa gatcgttctt atcactgatc atcgcatcag tttaaagaaa
     2941 gcaggacccg acaaagtgat ctttgttatg taatacctgg gaaattgacc gactaaattt
     3001 atttacacgc aaagaggctg agttaagaaa ttaaccagcc tcttttgttt ttagctatgg
     3061 acgagcagaa gaacgcgtcg ttatgcgctg tatccaattc tggacttttg aagtatatcg
     3121 gtcgaccggt ttttctaccg cggatcaact cggtctgaaa taacagaact cccctggtgt
     3181 cggcattagc tatctaacat tcctgtcaaa tgctgcggtc agtatctgtc catttatttt
     3241 cacctgcacc cagatgcggt atttgcctgc tgaaggaaaa gtgaagggaa aggaaacgat
     3301 attatcgccg tcgttcattc cctttatcat cggatcatct gccattgccg gcattttcaa
     3361 attcatttgt ttatctgcag acataccagg cattttcatt tcctgcacca ggcgttcatt
     3421 cctctcttct tcagtcatat gccgcaaatc attaaccaac cgatcgatgc tgtcccggaa
     3481 taaatttcca tcagggtagt tatattcgtt agccggcaga ctcattcggt ccagcaggct
     3541 ggattgtgcc gccatcgaat aggtcccaac aggatgtatg tgagcaaaca cgttcccatc
     3601 gtcgcgaact atcattgcat gccccggcat acccatatac aagtcgggtt tcactgcgct
     3661 gccattcttg tcccaaaccg aaaaacgaag tatggataca tcgccactgc ggtagtttga
     3721 attatctttc ggttgttcaa gcctgatggt cgtcccatca aacgatacag atctgccggc
     3781 gctatttgcg ctaacgtttc cctcgttttg acccggcaca aaacgagctg ccaacgcaaa
     3841 cgcatcgtca tggtcggaaa taatgctatc ctggaaatca gtttttgcaa gcggtgcatt
     3901 aacgacaaat gtatctttca tcgtttccgt aaaacctgag ttatacacaa catccgcata
     3961 ggctagatat cttcccgcag ggagatttgg caattcagtt gtgaaatgaa gcaggtctgt
     4021 tcgctcggga tgcaggtggg ccaatacatc cataccagga aaacgaataa taaataggtg
     4081 catgatcttc ccgtgatcgg gaacgatgta aggaagtatt tcttttcgtt gcgagtttgt
     4141 agtatcgatt gccaggtgca gttcattcat cccgtttttg tgctcaacct ggtaatttgc
     4201 atgcatcggc ctgaaaagat atttgctgta tatttttgcc ttcgtttgcc accagaggtt
     4261 accggcataa agggcggtga tgcaaactac cgccgcgatc gcaaccgcga ttcgacggtt
     4321 gcgtttcctg tttgcaggaa tgggagttcc acttttagta accgcgtcag agacgctcaa
     4381 gcctgcgatc gttattaaaa gaacaaacaa aaaaagtcca aatacaatta gaacccctgc
     4441 agtgccggca ggaagctttt gttcagttgt cgagacggcc atcacgggta caagcagctg
     4501 tccttttcct aaaggaccgt cgacagttaa atcgatgctg gcagagccgt tatccattag
     4561 ccacacaatt ccctcaaact gcccgggatg gtccgttaca ttttcgaggc gctctgcaga
     4621 gggagaaccg ttttctccgt aagaaaaata catggtccgc gcataggcgc ttgcacccga
     4681 tccgttgctc acgtacaccg tcacagttgc agttccgggg attgctccgg gcggttttat
     4741 atggacaagg acatggtaag caccagccat tccctcgaga accacatctg aactgccaac
     4801 atgcgcaaac gccgaactaa attcaagcaa gaggaaagcg gctaataaaa attttcttat
     4861 cataaaccag ttgaacaaaa tcagtaatta gaagctctta tcaacgacga atatgcagca
     4921 tccattttcc ccaggtcaaa cttaaaaggg taaccagcat tcccaaaact atcgcgatga
     4981 gaataccaac tgcgaaaaat ggcagcggct gaatttctgt gggactgaat ttataccgaa
     5041 aaggagcatc gggtggattt tggtagtacc atgcatcacc accaaaaaac cagttgcgtg
     5101 aagaaggcga ttcacgcagg aaaccactga aaggatattg tattgttact aatgtcaaca
     5161 caaatatcat cgacaaacag gcggccctga tccagtcatt acctttaaat ttttgcagca
     5221 ggaggtccat aaaatatgct ggaaccataa ttagcaacgg aaaattcccc ggctgaaaat
     5281 gggtcgtgtg tgtaaggatg ggtccaagtt tcggctccgc cggaaatatt tgtaatatcc
     5341 aatttgaaca tgcggagatc aggaaataac agcaggcaat tgcggtcata ccccatttca
     5401 atcggagggc cttgccaaaa cccggcaata acaacaacgt gataacggta accgactgat
     5461 agaagcgcgc gtccctcata ctgctgacgc gcacgtagct aatggcaagt gtatagacca
     5521 tgcataaaaa agtcgctgct gtcacaacca acaaaaattg caaaggccga atcgatctgt
     5581 tgttcggaga tgttaggttg atgtatttaa tgatccacaa acaggttccg gtttgcatcg
     5641 aaaaaatccc ggccaggaga agcgaatgcg gaggtgaaag aatttgaaga tcgagtccaa
     5701 aagcagtatg ccaccaatta tcaaaaggtg cggaagttaa catagcgatg gcaccccaga
     5761 tacaaaagag cgccccaaac gaactgtaaa agatacccca gagttttaca taagcatcct
     5821 tttgcgcttt tgcggaaaaa gaatttatca ttacatgtgt tccggaagat aatgccccca
     5881 ggatagctcc gaggtaaaca acaatatgtg gtggcgtgag aaacctatcg cgtccgatgg
     5941 attgatgcca ggagatatcc cacaagatgc cgcctgttat taaaaaacaa gctacggtga
     6001 gcaaataaa
//
LOCUS       DASQJI010000310         3996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_802331,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000310 DASQJI010000000
VERSION     DASQJI010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802331"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VEV83_08645"
     CDS             complement(<1..465)
                     /locus_tag="VEV83_08645"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK45222.1"
                     /translation="MTSVYDVAIIGAGAMGSAAAYHLSKREKSILVLDQFSPPHNLGS
                     SHGETRIIREAYFESPMYVPLVQKAYELWHQLEQESGERLFLKTGGLMLGDKDSKVLS
                     GAELSAERYQIWYEELDGKAISKRFPAFKPAQATVAVYEKNAGLLYPEACVRA"
     gene            622..1716
                     /locus_tag="VEV83_08650"
     CDS             622..1716
                     /locus_tag="VEV83_08650"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HYK45223.1"
                     /translation="MQTQTLFVNSKDIATARLITQQIAESKFKKVKDLVGWMGAMQAQ
                     DFIMAKWAVGIRVPGATDKMVQAAVDKGDIIRTHILRPTWHFVSADDIHWMLALSGPG
                     LKSSMKGRDKRLGLTEADFKKSNKIIEKALSGGKHLTRDVLLAKLEKAKIDTRDFRSL
                     HIMMRAELDGLVCSGVTNEKRQTYALLDERVPKKKLLKKDEALAKLAKRYFTAHCPAT
                     LQDFMWWSGLNAGDSKLALQIIKKDLIGKTVGLGTYWCDKTFSFPQTKPAVYLLPAYD
                     EYLISYKDRSASLQPQHRATALTGNGIFYPVVVANGQVVGLWKRTAGKTGIDLRFNFF
                     SPLNKQQSMALHKEVQRFEAFTGETCNICE"
     gene            1906..3189
                     /locus_tag="VEV83_08655"
     CDS             1906..3189
                     /locus_tag="VEV83_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HYK45224.1"
                     /translation="MKRICLFSAALCLLHVLTAQTVVSININGDINPVSAGFIHRSIQ
                     QAESEKAECLLIHLNTPGGLLTSTRTIVSDILKSPVPVVVYVSPGGSHAGSAGVFVTL
                     SANIAAMAPGTNIGAAHPVSLQGMPDTIMNAKGTNDAAAFIRTIAEKRSRNADWAEEA
                     VRNSVAITEKEALEKGVIDLIARDDGDLLHQIDARKVEVAAGYKILRTNNADIHSVQM
                     GFFERILDILSDPNISYILMMLGFYGLMFELYNPGLIFPGIIGVISLVLAFYAMNTLP
                     VNYAGLGLIVFGIILFLLEIKIISHGLLTIGGVLSILLGSMILFRSSSAENFVHLSWS
                     VVIGCTAATALFFLFVVGAGIRAQRLKPVTGANALIGKTGTSLSILDPSGTVRVHGEI
                     WKAESLSGRIEQGEPIQVRAIKNLSLYVEQMTGST"
     gene            3236..3994
                     /locus_tag="VEV83_08660"
     CDS             3236..3994
                     /locus_tag="VEV83_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HYK45225.1"
                     /translation="MQQVPVVFLFIIVFTLFILGNAIRILREYERGVIFRLGRVLGGG
                     VKGPGLILLIPIVDKMVKVSLRTVVMDVPPQDVITRDNVSIKVNAVVYFRVLDPQSAI
                     IEIENYLTGTSQLSQTTLRSVLGQSELDDLLSNREMINQKLQQIIDMQTEPWGIKVTH
                     VEVKQIDLPQEMQRAMAKQAEAERERRSKVISAEGEFQASQRLSDAAKILSEQPSALT
                     LRYLQTLREIATEKNSTTIFPIPIDILKPFLKKD"
BASE COUNT         1093 a          857 c          960 g         1086 t
ORIGIN      
        1 cgcgcggaca catgcttccg gatatagcag ccccgcattt ttttcataaa cggccaccgt
       61 tgcctgtgcg ggcttaaatg caggaaatct tttactgatt gcttttccat ctaactcctc
      121 ataccaaatc tggtatcgtt cggcactaag ctctgctccg ctaagaactt tactgtcttt
      181 atcgcccagc atcagtccac ccgtttttaa aaacaagcgt tcgccgcttt cttgttccag
      241 ttgatgccat agttcatagg ctttttgtac gagcggtacg tacattggac tttcaaaata
      301 agcttcacga atgatcctcg tttcgccatg cgatgaacca agattgtgcg gcggtgaaaa
      361 ttgatcgagc actaaaatgc tcttttctct cttcgacaga tgataggctg cagcgctccc
      421 catggcgccg gcaccaatga ttgccacgtc ataaactgaa gtcattcttt tactttgctt
      481 gtgagcgcta agatatgaat tgcgttatgg ttgagtaatc gctgccagca gattaattag
      541 catcgtgaat tgcaacggtt aattgaaccc gataaccgaa tatccaaata acctattaac
      601 ccaatatccc aatatcctaa tttgcaaaca caaacactct tcgtgaattc aaaagacatt
      661 gcaacagcac gactgatcac ccagcaaatt gctgaatcta aattcaaaaa agtaaaagac
      721 ttagttggct ggatgggagc catgcaagcg caggatttta ttatggcaaa atgggcagtg
      781 ggtattcgcg ttcccggcgc aacggacaag atggtccagg ctgcagtcga taaaggtgac
      841 attattcgta cgcatatatt aaggcctacc tggcattttg tttcggcgga tgatattcat
      901 tggatgctcg cattgagcgg cccgggactc aaatcttcta tgaagggacg agataaacga
      961 ctggggttga cagaagcaga ttttaagaag tcgaataaaa ttattgaaaa ggcactctca
     1021 ggcggtaaac acttaacacg agatgtgtta cttgctaaac ttgagaaagc caaaattgat
     1081 acgcgtgatt tcaggtcgct acatattatg atgcgggctg aattagatgg gttggtatgc
     1141 agtggtgtta ctaacgaaaa aagacaaacg tatgctttgc ttgatgagag agttccaaag
     1201 aaaaagcttt taaagaaaga cgaggcgttg gcaaagcttg cgaaaagata ttttacagct
     1261 cattgtccgg cgactttaca ggatttcatg tggtggtcgg gattaaatgc aggagattca
     1321 aagctcgcat tgcagataat aaaaaaagat cttattggga aaactgttgg cctgggaacc
     1381 tactggtgtg acaaaacgtt ttcatttccg caaactaaac ccgctgttta tctgctgcct
     1441 gcatacgatg aatacctcat cagctataaa gatcgcagcg cttcgcttca acctcaacac
     1501 cgggcaacag ctttaacggg gaatggaatt ttttatcctg tcgttgttgc gaacggacag
     1561 gtggtcggct tatggaaaag aactgctggt aaaacaggga tcgatttgag atttaatttt
     1621 ttcagccccc tgaacaaaca acagtccatg gctctgcaca aagaggttca gcggtttgaa
     1681 gcatttacag gcgaaacctg taacatctgc gagtgacagt tttggttatt gcatcgcgtg
     1741 cttagccaca accaggaagc tcttgcatca cactttattc gttgcatagt atcgttagat
     1801 gaataatgca ggcggttgct ttttagcccg gcaaattccc cttaaaattt taatcagtat
     1861 attagagtag tgaatactca gggatttctg ttataaaatt atcgtatgaa gcggatctgc
     1921 ttgttttctg ctgcattgtg tttgcttcat gtgctgaccg ctcaaacagt cgtttcaata
     1981 aacatcaatg gcgatataaa tcctgtttcg gccggcttta tacaccgcag cattcagcag
     2041 gctgaaagtg aaaaagcgga atgccttctc atacatctca acacgccggg cggattgctc
     2101 acgtcgacac gaacaatcgt cagtgatatt ttaaaatcgc cggtacctgt tgtcgtctac
     2161 gtgtcgccgg gtggaagtca tgctggatcg gccggtgtgt tcgtgacgct ttctgcaaat
     2221 attgccgcga tggcgcctgg cacgaacatc ggggccgcgc atcccgtgtc gttgcagggc
     2281 atgcctgata cgatcatgaa tgcaaaaggc acgaacgatg cggctgcatt tatcagaacg
     2341 attgcagaaa aaaggagcag gaatgctgat tgggcggaag aggcagtgcg taatagtgtc
     2401 gccatcaccg aaaaagaggc tttggagaaa ggggttatcg atcttattgc acgtgatgac
     2461 ggcgacctgt tgcaccaaat agatgcgaga aaagttgaag tcgccgctgg ctacaaaatt
     2521 cttcgaacaa acaatgccga cattcattcg gtgcaaatgg gcttcttcga aaggatcctc
     2581 gatatcttaa gcgatccgaa tatctcttac attttaatga tgctcggctt ttacgggctt
     2641 atgtttgaat tatataaccc tggtttaata tttccaggta tcatcggcgt catctcactt
     2701 gtgcttgctt tttatgccat gaatacatta cctgttaact atgcaggact tggcctgatc
     2761 gtcttcggca ttatcctgtt tttgcttgaa ataaaaatta ttagtcacgg cttgctcacg
     2821 atcggcggtg ttttatcgat actgctcggc tcgatgatct tattccgaag cagttcggca
     2881 gagaactttg tacatctttc gtggagcgta gtgatcgggt gtacggccgc aactgcattg
     2941 ttcttccttt ttgtggtagg tgcgggcata cgtgcgcagc ggctgaaacc ggttacgggt
     3001 gcaaatgcgt taattgggaa gaccggcaca tccctcagca ttctcgatcc ttccggtacc
     3061 gtgcgcgtgc atggcgagat ctggaaggca gaaagtttgt cgggcagaat tgagcagggg
     3121 gaaccgatcc aggtgcgtgc aatcaaaaat cttagcttat atgttgagca gatgacgggt
     3181 tcaacatagc aacagttatg aatagggagt ttaaaaacaa aatcaaacaa actttatgca
     3241 acaagttccg gtcgtctttc tctttattat tgtatttacg ttattcattc ttggcaatgc
     3301 cattcgcata cttcgcgaat atgaacgcgg tgtgatcttt cgcctcggca gggttctcgg
     3361 cggcggtgtc aaaggtccgg gtttgatatt gctcataccg atcgttgaca agatggtcaa
     3421 ggttagcttg cgtactgtag taatggacgt gcctccgcag gatgtgatca caagggacaa
     3481 cgtttcgatt aaagtgaatg cggtggttta tttccgtgtg ctcgatccac agagcgcgat
     3541 cattgaaatt gaaaattatc tcaccggcac ttcacagctt tcccaaacta cgttgcgaag
     3601 tgtgctcggg caatctgagt tagacgacct tctttcgaac cgcgaaatga tcaaccagaa
     3661 attgcagcag atcatcgaca tgcagacgga gccatggggt ataaaagtta cgcacgtgga
     3721 agtaaagcag atcgatcttc cgcaagagat gcaacgtgcc atggcaaaac aagctgaggc
     3781 agaaagagaa cgcagaagta aagtgatctc tgctgaaggg gagttccagg cgtcacagcg
     3841 tttgtcggat gcagcaaaaa ttttaagtga acaaccaagt gcgcttacgc tgcggtattt
     3901 gcaaacactg cgcgagatcg cgacggaaaa aaattcaacg acaattttcc cgataccaat
     3961 agatattttg aagccgttcc tgaagaagga ttgaat
//
LOCUS       DASQJI010000311         8546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1877599,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000311 DASQJI010000000
VERSION     DASQJI010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8546
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1877599"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..1224
                     /locus_tag="VEV83_08665"
     CDS             196..1224
                     /locus_tag="VEV83_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PorP/SprF family type IX secretion system
                     membrane protein"
                     /protein_id="HYK45226.1"
                     /translation="MKNLTRICMIIMACSMLKTYGQDPHFSQFFEAPLLRNPSLAGLF
                     AGDIRFQAVYRNQWQSVTTPYQTASINLEYKQPIGRGNDFITTGIQIMYDRAGVTNFT
                     TSNIYPAINFHKSLNDEKSKYLSFGVMGGYVQRRIDRSKITTNNQYDGNGYNPSLADG
                     ETLTKFSYHYWDASFGVSFNSSIAGSETDYYFIGAAYHHFNRPQNSFYKNPPVELNPK
                     FVFSGGVRLSIDEVSYVTIQGDYSKQGEYYEAIGGATYSRKIGDGYSNRIYTVDFGGY
                     LRWNDAFIPVLKLNYDPFSIALSYDVTISGLKAASQYRGGFEISFAYAGFLDRNNSTK
                     NSVLCPRF"
     gene            1410..1799
                     /locus_tag="VEV83_08670"
     CDS             1410..1799
                     /locus_tag="VEV83_08670"
                     /inference="COORDINATES: protein motif:HMM:NF039201.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45227.1"
                     /translation="MNKIYTKHFGQGLRKVLLAVTFGILMSVFQSYAPPSSFFGEASI
                     QAKTIKCYPNPAISFINFEFKNDFVSKDYSLSVYSFTGKKVSEINITSAKTTLTFTNE
                     FYRGIYVYQLRDKSGKIIETGKFQVVK"
     gene            2090..5284
                     /locus_tag="VEV83_08675"
     CDS             2090..5284
                     /locus_tag="VEV83_08675"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK45228.1"
                     /translation="MRKMPPLLAALLLCSALTFAQIKTINGKITDENGKPLEGVSVVD
                     KKTQKGAITNASGEFSLAVTTGEKIMISAIGFGTQELIIGTQSQVNISLTPVSAQLNE
                     VVVTALGIKREKKALGYAVSTVDKKDLELRPEGDLGRVLNGKAPGLNVINTSGLTGSG
                     TNIVIRGVSSITGSSQPLFIVDGVPFNVSTNAQADFTYGNQTSSRFLDLDPNNIESVN
                     VLKGLSATTLYGEEGRNGVILITTKTGSTQKAKSKQEITVTQSFFANSVANLPDYEKT
                     WGGGFDLSLGVTFFSNWGAKITDPPQIVHHPYDRDAINADFKDENGNPIFEGAPYEYK
                     FYNSVEEFFRTGLVSNTSVNVAGSAGAVNYNLNYSYLDDEGFTPGNNQIRNSFGLGGT
                     AKLSNRFTVSGALNYVTNNVASPPTSTSFGSSASNTSVFGDVMYTPTTVDLMGLPYQD
                     PVTGGHVYYRSANDIQNPRWTVANAFTKDNVNRSYGNLQAVYNVMKSLNLTYRVGLDN
                     YTEDQLYAQNKGGAYYSTGIYRTSAGNNVIWNHQLIADYSTPFANKWSLNATAGVNST
                     QETYKQTGYTSTQQLVFGLLDHTNFITHDTKSENGLDLDYTSATRSYAVFAQAIVGYN
                     DYLFFNLGGRNSWTSTLESNNRTLFYPSVSASFIPTSAIASLQNSKNVNYLKVRLGYG
                     TSARFPDPYSTRSVLDINTRAFLERNGTPINTNSINDLLANPDLKPELQKEIEAGLEG
                     RFIDNRVSIDLTFYRRTTNDQILFRELDPSTGYTLEAINAGNVTNKGIELALGYTVIR
                     NKDWTWHLDGLYDLNRSKVSDLPEDLSQVLIAGYTDLGNFAINGQPYGVIKSYYVVRD
                     TVAGSKGFGQRVVDQTGSYLISSDQKVTGDPNPLYKLTGISTLTWKSLSFRMQWEFTE
                     GGDYYSSTTVNLVGRGVTEETDFDRTLPMILPGVKQDGTPNDIQVSATAAYFNNLVGS
                     TSDLAIYDATLVRFREASLTWTLPDKWLSKTPFGAASLTFSGTNLWYYAPNFPKHVHF
                     DPEAAGFGVSNGRGLEFFSGPSSRRIGGSLRITF"
     gene            5303..6988
                     /locus_tag="VEV83_08680"
     CDS             5303..6988
                     /locus_tag="VEV83_08680"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HYK45229.1"
                     /translation="MNYKKLLIALLMVGTLASCAKKLDDLLVNPNSPDPNTADVDLYL
                     NYVQLEFKNVYNEASDRGQELTRQSVMFGPIYSNAYAPNTFDGIWTNAYAELMKNANA
                     LIGLADAKGQYIQAGIARTLKAYVLATLVDDFGDVPYSEIDQGASNTNPTTDAGADVY
                     AAAHQLLDSALLDFEAPNPAAGPENDLYYDGDETKWATLVKTLQLKLYMNERLTDASA
                     KDKIAALISDNDLIDEPDGSEDFVFKYGTNISAPDTRHPHYVSNYTENGAGDYIGTHF
                     LWAVGYEKGSRVDPRLRFYFYRQVINYDAVDDITCACASQARPSWFPSWMPYCLPVTL
                     PATGGYWGRDHGDNSGIPPDNQLRTAWGIYPAGGKFDADQAEAISSISEGALGAGINP
                     IWLASYTDFLKAEATLALSISGNAKTLLEDGVRASISKVINYPKSVGQDVEALYSAYY
                     PAQTAIDKYVNLVLADYDAAGSNDDKLNVVMKEYYIAAWGNGIEPYNNYRRTGKPDNL
                     QLTAYSSNPGYFIRSFYYPAVFVDRNLNAPTQKTLGIAPEKVFWDNNADDFIH"
     gene            7005..7886
                     /locus_tag="VEV83_08685"
     CDS             7005..7886
                     /locus_tag="VEV83_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45230.1"
                     /translation="MRKIAIILVVAGGILGMTGCKKTDTNPLNDVNNLGAGSYLTFLA
                     KTNTTFDISDLSNSEISVSVKGVGSPIDHINLYVVQGGGNLDTTAWAFIKSIDYTPDS
                     TVITASAQETADALGITLADFEAGASFTFYNRIYTQDGRQFDIVNIDPSFESNSNYNM
                     ALRFTVYIGCPFIAPVGGTYKVLQDDWADWSPGDLVQVEDGPGPNQVNLSHVYPNPAY
                     GDVIDPLIVDVDPANGIATVPETNYGNYSKIAFEPSMTAVGGGFVFSCTGTIDLTLDH
                     FAPSGDYGNLRLLLQKQ"
     gene            8054..8140
                     /locus_tag="VEV83_08690"
     tRNA            8054..8140
                     /locus_tag="VEV83_08690"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8088..8090,aa:Ser,seq:gga)
     gene            complement(8364..>8546)
                     /locus_tag="VEV83_08695"
     CDS             complement(8364..>8546)
                     /locus_tag="VEV83_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HYK45231.1"
                     /translation="LEHIVLETDAPYLTPVPFRGKRNESSYLKIIAGKLAEVKDISVD
                     EVAEITTANAEKIFGH"
BASE COUNT         2450 a         1944 c         1899 g         2253 t
ORIGIN      
        1 gctcttctgg catttttaat gcaacgatat agtcggacag catttgtttc acggtcccgg
       61 aaatagcgaa ttcttgtgac cattggataa ttggcaccgt gaatagtttc agcttttatc
      121 gtattcatta tgttattacc ctgattaaaa acactgaatg acccaattct attatcagca
      181 tccaaacgac ccactatgaa gaaccttacg cgtatttgca tgatcatcat ggcatgcagt
      241 atgcttaaaa cttacggtca ggatccgcat ttttcgcaat tttttgaggc gccgcttttg
      301 cgcaatcctt cactcgccgg gctgtttgca ggagacatac gattccaggc agtgtatcgc
      361 aaccaatggc aaagcgttac cacgccatat caaactgcat ccataaacct cgaatacaaa
      421 caaccgatcg gacgcggaaa cgattttata acgacgggca ttcagatcat gtatgaccgc
      481 gccggcgtaa caaactttac aacatccaat atttacccgg caataaattt tcataaatca
      541 ctcaacgatg agaaaagcaa atacctttct tttggagtga tgggcggata tgtgcagcgt
      601 cgtattgatc gcagcaagat cacgacgaat aatcagtatg acggtaatgg ttataatcct
      661 tcgcttgctg atggtgaaac actaacaaag ttcagctatc attactggga tgcaagtttt
      721 ggggtttcgt tcaactcttc gatcgcaggc agcgaaaccg actattactt tatcggcgca
      781 gcttatcatc atttcaaccg ccctcaaaat tcattttaca agaacccgcc ggtggaacta
      841 aatccaaagt ttgttttttc cggcggcgtc aggctttcta tagatgaggt ctcctacgtg
      901 acgatccagg gggactattc gaaacaggga gagtactatg aagcaatagg cggggcgaca
      961 tattcgcgga aaattggaga cggctattcc aaccgcatct atacagttga ctttggtggc
     1021 tacctgcgtt ggaatgatgc ttttattccg gtactgaaac ttaattacga ccctttttcc
     1081 atcgcgctta gctatgatgt aactatttca ggcctgaaag cagccagtca ataccgtggt
     1141 ggtttcgaga tttcatttgc atatgcagga tttcttgacc gcaacaacag tactaagaat
     1201 tcagtgttat gcccacggtt ttaatctgca acggtatcct tgtcgtttgt ttcaattttg
     1261 gcaccgctgt tgatcaattc aatgttttgg agggccgaac gaagggctcg cggccgtctt
     1321 aaaaatttgc aaaaattatg gatggcgatg aaattttgct atgaatttgg tcaaacacat
     1381 tattgtttat aattttatgt gatcgaagaa tgaataaaat ctacacaaaa cattttgggc
     1441 agggtttaag aaaggttctc ctggcggtta cgtttggtat tttgatgtcc gtatttcaat
     1501 cgtatgcgcc gccgtcttca ttctttggcg aggcgagcat tcaagcgaaa accataaaat
     1561 gttatcctaa tcctgcgatt tcgttcatca actttgaatt taaaaatgat tttgtttcaa
     1621 aagactactc acttagcgtg tacagcttta caggcaaaaa agtatccgag atcaatataa
     1681 catctgcaaa gacaacgctc acttttacca acgaattcta ccgtggcatt tatgtttatc
     1741 aactgcggga taagtccggc aaaattatag agaccggcaa gttccaggtc gtaaagtaag
     1801 tccttccttc ctagccttaa tttcctaatt ggctcgccag cttaacttgc gttttttcag
     1861 catcgcattc catcgctttt cactcctttt cgaatctaca accggcgtgg tgcgatgaga
     1921 actcgtaatc aaagcgtgcc gctcgcctgc taaaaatgcc ctaaaaaggc ttcgatcgac
     1981 gaaaactcgc atatacaaat tttttcgtct ccaacggccg cctatcataa ttaacaaatt
     2041 tttattgcta gttaaaaatt cctactttag gagcctaaaa ttatgtcaca tgagaaagat
     2101 gcctccacta ctggcagcct tgctgctatg ctctgctctc acctttgccc aaatcaaaac
     2161 aataaacggt aagatcaccg atgaaaacgg aaagcctctt gaaggcgttt cagttgttga
     2221 taagaagacc caaaagggag caattaccaa tgcttccgga gaattcagtc tggcggtgac
     2281 tacgggagaa aaaatcatga tttcggcgat tgggttcggc acccaggagc taatcatcgg
     2341 tacccaaagc caggtcaata tttcattaac ccccgtgagt gcccaattga atgaagttgt
     2401 tgttaccgct cttggtatta aaagagagaa gaaagccctg ggctatgctg tttccacagt
     2461 agataaaaag gaccttgagt tgagaccgga aggcgacctc ggccgcgtgc taaacggtaa
     2521 ggcgccgggc ttgaatgtaa taaacacaag tggtttaacc ggaagcggca ccaacattgt
     2581 catccgtggc gtgagtagta ttacgggaag ctcgcagcct ttatttattg ttgacggtgt
     2641 accgttcaac gtaagcacga acgcacaagc agattttaca tatggaaacc agacgtcgag
     2701 ccgtttcctc gatcttgacc cgaacaatat tgaaagcgtt aacgtgttaa agggtcttag
     2761 tgccacaaca ctctatggag aagaaggaag aaacggtgtg atattaatta ccacaaaaac
     2821 cggatccacg cagaaagcaa aatccaaaca ggaaataacg gttacgcaat ccttctttgc
     2881 taattcagtg gctaatcttc ctgactacga aaaaacatgg ggtggcggat tcgatcttag
     2941 cctgggcgtt acatttttca gcaactgggg tgctaagatc actgaccctc ctcaaatcgt
     3001 gcatcatcca tatgacagag acgctataaa cgcagatttt aaagacgaga atggtaatcc
     3061 aattttcgaa ggcgcaccgt atgaatataa attctataac agcgttgaag agtttttccg
     3121 cactggcctg gttagtaata catcggttaa cgtagccggc agcgcgggtg ctgtcaatta
     3181 taatctcaac tatagttatt tagatgacga agggtttaca ccgggaaata atcaaatacg
     3241 aaattcattt ggcctcggcg gaacggcaaa actttccaac cggttcactg taagcggtgc
     3301 cctcaattat gtaaccaaca acgtagcctc gcctccaacc agcaccagct tcgggagtag
     3361 tgcatcaaat acatctgtat ttggagatgt gatgtacaca ccgactaccg tggatctgat
     3421 gggcctacca taccaagatc ctgttaccgg tggccatgtc tattaccgtt ctgccaatga
     3481 cattcagaac ccgcgctgga ctgtcgccaa cgcattcaca aaagataatg tgaatcgcag
     3541 ttatggcaac ctccaggcgg tatacaatgt aatgaagtcc cttaacttaa cttaccgggt
     3601 aggactcgac aactatactg aagaccaact ctatgcacaa aataaaggcg gcgcatatta
     3661 ttcgactggc atctatcgca catcagcagg caataatgta atatggaacc accagctcat
     3721 agctgattac agcactccct ttgcaaacaa atggagttta aatgcaacgg caggagtaaa
     3781 cagcacacaa gaaacttata aacaaactgg atacaccagc actcaacagc tcgtattcgg
     3841 tttgcttgat cacaccaatt tcattacaca tgacacgaag agcgaaaatg gactagacct
     3901 cgattatacc agtgccacca gaagctatgc tgtgtttgcg caggcgatag tgggctataa
     3961 cgattattta ttcttcaact taggcggccg caacagctgg acatctacgc tcgagtctaa
     4021 caatcgcacc ctgttctacc cgagtgtaag cgcttccttc atacctacct cggcaatcgc
     4081 atcattgcaa aacagtaaaa acgttaacta tctaaaagta cgactggggt atggtactag
     4141 tgcccgtttt cctgaccctt atagtactag atccgtgtta gacattaata cccgggcgtt
     4201 cttagagagg aatggaacac cgatcaacac aaattccatc aatgacctgc tggctaatcc
     4261 tgatttaaag cctgagctgc aaaaagaaat cgaagctggt ctggagggca gatttatcga
     4321 caaccgggtt agtattgacc tgacttttta cagaagaaca acaaatgatc aaattctctt
     4381 tagagaactg gatcccagca ccggctatac actggaagca ataaatgccg ggaacgttac
     4441 gaacaaagga atagagctcg cgctaggcta tacagtcatc cgaaataaag actggacctg
     4501 gcatttagac ggtctctatg accttaaccg cagcaaagta agtgaccttc cggaagacct
     4561 gtcgcaggtt ttaattgcag gctacacaga tctgggcaat tttgcaatta atggccagcc
     4621 ttatggagtt atcaaaagtt attatgttgt gcgggatact gtggcaggat caaagggatt
     4681 tggccaaaga gtagtggatc aaacaggctc atatcttatc tcatccgatc agaaagttac
     4741 cggagatcca aatccgcttt ataaactcac agggatcagc acacttacat ggaaatcgct
     4801 aagctttaga atgcaatggg agtttactga aggaggcgat tactattctt ccaccacggt
     4861 aaatcttgtc ggaagaggcg tgacagaaga aacggatttt gacagaacgc tgcccatgat
     4921 actacccggc gtcaagcaag acggaactcc aaatgatata caagtaagtg ctaccgcagc
     4981 atactttaat aaccttgtgg gcagtacgag tgatctggcg atctatgacg ccacgctggt
     5041 tagatttaga gaagcttctt taacgtggac actacccgac aaatggttat ccaaaacgcc
     5101 ttttggtgca gcttcgctta cattttccgg aacgaactta tggtattatg cacccaattt
     5161 tccaaaacat gtgcattttg atccggaggc tgctggattt ggggtaagca atggacgcgg
     5221 tcttgagttc ttttccggtc cttcttcccg ccgcatcggt ggcagcctca gaataacctt
     5281 ttaaataata aaacttattg tcatgaacta taagaaactt ttgatagccc tgctgatggt
     5341 cggaacgctt gcgtcctgtg caaaaaagct ggacgatctg ctggtcaatc caaatagtcc
     5401 tgatcccaat actgctgatg tggacttata tctgaactat gtgcaattgg aattcaaaaa
     5461 tgtttacaat gaggcttcgg atcgcgggca ggaattgacc cggcaatctg tgatgtttgg
     5521 accgatctac agcaatgcgt acgctcctaa cacgtttgac ggaatatgga cgaacgctta
     5581 cgccgaatta atgaaaaatg caaacgcgct tatcggcctt gctgacgcaa aaggacaata
     5641 catacaagcc ggtattgccc gaacgctcaa ggcgtatgtg ctggctacgc tggttgatga
     5701 ttttggagat gtgccttatt ccgaaataga ccagggagct tccaacacaa atccaacaac
     5761 agatgcggga gctgatgtgt atgcagcagc gcatcaacta ttggatagcg ctcttcttga
     5821 ttttgaggcg ccaaaccctg cggccggccc tgagaatgac ctttattatg acggcgatga
     5881 aacaaaatgg gcaactttag taaagacgct gcagctgaag ttgtatatga atgaaagatt
     5941 aactgacgcc tcggcaaaag acaaaatagc ggcattaatt tcagacaatg atcttatcga
     6001 tgaaccggat ggttcagagg attttgtgtt taaatatggc acaaacattt cggcacccga
     6061 tacaaggcat ccgcattatg tttccaatta tacagaaaat ggcgccggag attacattgg
     6121 aactcacttt ttatgggctg ttggttatga gaaaggttct cgcgtcgatc cgcggttgag
     6181 attctacttt tacaggcagg tcataaatta tgatgcggtg gatgatatca cttgtgcctg
     6241 tgcctcccag gccaggccgt cctggttccc ctcctggatg ccgtattgcc tgcctgtcac
     6301 gttgcctgcg acagggggat attggggacg agatcatgga gataactcag gaattccacc
     6361 agacaaccag ctacgtacgg cttggggaat ttatcctgcc ggaggaaaat ttgacgccga
     6421 tcaggccgaa gctatttcaa gcataagtga aggagcattg ggtgcaggta tcaatccaat
     6481 atggcttgca tcgtacactg attttttaaa agccgaagca acactggcac ttagtatttc
     6541 aggaaacgca aaaactcttt tagaggatgg agtccgcgcg tcaattagca aggtgataaa
     6601 ctatccgaag tctgttggcc aggatgtcga ggcattgtac agcgcctatt atccggccca
     6661 aactgctatt gataaatatg tcaacctggt tttggcagat tatgatgctg cgggaagtaa
     6721 cgatgataaa ctaaacgtcg tgatgaagga gtactacatc gcggcctggg gtaacggtat
     6781 cgagccctac aacaactacc gcagaacagg caaaccggat aatctgcaat taacggcata
     6841 ttcatcaaac cccggctatt ttattcgttc attttattac cccgcagttt tcgttgatcg
     6901 caacttaaat gcgcccacgc agaagaccct cggcattgct ccggagaaag ttttttggga
     6961 taataatgct gatgacttca ttcattaaaa ttaaactcca aacaatgaga aaaatagcaa
     7021 taatacttgt ggtagctggg ggtatcctcg gcatgaccgg ttgcaaaaaa accgatacga
     7081 acccgctcaa tgacgtaaat aaccttgggg cgggctccta tctcacattt ctggcaaaaa
     7141 caaataccac gtttgatatc tcagatctgt ctaattctga aataagtgtt tctgtgaaag
     7201 gtgtcggcag ccccatcgat cacattaacc tctatgttgt tcagggcgga ggcaatttag
     7261 acacgacagc gtgggctttc attaagtcga tagactacac tccggatagc accgtgatta
     7321 cagcctccgc tcaggaaacg gcagacgcgc taggcatcac gctcgcagac ttcgaggccg
     7381 gcgccagttt cactttctac aacaggatct atacgcagga tgggcgacag ttcgatatcg
     7441 taaacatcga tccgtcattt gagagtaact caaactacaa tatggccctc cgctttacgg
     7501 tgtacatcgg ctgtcccttt attgcgccag ttggaggtac ttacaaagta ttacaggacg
     7561 attgggctga ctggtctccc ggcgacctgg tacaagtaga agatggaccg ggtccaaacc
     7621 aggtgaattt atcgcatgtc tatccaaacc cggcatatgg tgacgtcata gacccgttga
     7681 ttgtggatgt cgaccctgcg aatggcatcg ccacagttcc tgaaaccaat tatgggaatt
     7741 attcaaaaat cgcttttgag ccatctatga ctgccgttgg tgggggattc gttttttcat
     7801 gcaccggaac aatagacctg acccttgatc atttcgcgcc ctcgggtgac tacggtaatc
     7861 tgcgattgct tttgcagaaa caataatcgt taggctataa taaaaaagca ggagttgccg
     7921 ctcctgcttt tttattaatc gcgccaaggg cggaacaaca tgaattacaa attgaatcca
     7981 taaaaattat tcggatcctg aacggcaagc gactaatttt gtgagccgtc aattttgacc
     8041 aataacagta taaggaggag tgctcgagtg gttgaagagg cacgcctgga aagtgtgtat
     8101 actcgaaagg gtatcaaggg ttcgaatccc ttctcctccg cacgccgcca ccctgcttcg
     8161 tcgtttacat actcagcgct gaaagatttg cttgtctcgt tttttctgtt ggctaaccta
     8221 acgagttaga caagcgtctt tggaagcatt ttgaccggat gagcaagcgg tttaggacac
     8281 ctattcacca ggagagcatt cttaaggcgt gaaagagaaa tcgaagtaca cgatccgcat
     8341 acattcattc cactttcggc cattcagtgg ccaaatattt tttcagcatt tgccgtcgtg
     8401 atctcagcta cttcatcaac agaaatatcc ttcacttcag ccagcttacc cgcaatgatt
     8461 tttaggtaac tgctctcatt cctctttcca cgaaaaggca ccggcgtcaa ataaggagca
     8521 tccgtttcca gcactatatg ttcgag
//
LOCUS       DASQJI010000312         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_187992,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000312 DASQJI010000000
VERSION     DASQJI010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187992"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(306..908)
                     /locus_tag="VEV83_08700"
     CDS             complement(306..908)
                     /locus_tag="VEV83_08700"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK45232.1"
                     /translation="MKKIFLISFCSVVVLSTLSSFKLTSPAGYKIGDKAEDFALKNVD
                     GKMVSLKDYRNVKGYIVVFTCNHCPFAKAYEERIIELHKKYAPLGYPVVAINPNNPQM
                     NPEDSYEMMQARAKEKAYPFAYLFDEKQQVYPKFGATRTPHVFLLTKDLSIAYIGAID
                     DNSQDPSAVKNKYVENAITALEKGEQPNPAVTKAIGCSIK"
     gene            complement(939..1436)
                     /locus_tag="VEV83_08705"
     CDS             complement(939..1436)
                     /locus_tag="VEV83_08705"
                     /inference="COORDINATES: protein motif:HMM:NF025273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HYK45233.1"
                     /translation="MKGSRKAYWPAIFFMLVTITAVKSQTVTIYDSFPQLESRFHMSG
                     DTTLLVNFWATWCKPCIQELPYFQSLEKKFAGKKFKILLVSLDFRMQLETQVIPFVKN
                     KKIKPEVVLLADGDANNWIPNVDSQWDGAIPVTLMIVHGEKFFYGHGFDSQKQLESWI
                     GAHLN"
BASE COUNT          404 a          350 c          355 g          500 t
ORIGIN      
        1 taatcgcagg cttcgttaaa ctggttcatg tgcagatagt gttcacgcaa atgtgatgtt
       61 tttttttaag cccgggtgtt tgattttcgc aatgtaaagc gatcgttcta aatgacaaac
      121 gagaaactga ttgtgttgag gtatcaaaaa ttgatgatcc agtgagcgac gagaccatta
      181 tactttttga cgcttcgtga cctggcgtct ttgtggttct gagctgttca accagcaaga
      241 ttcgaataca cgacgagatg ccaggaaaaa aattgagatt taataaaaca atcacgcaat
      301 acgttctact ttatcgagca gcctattgct tttgtaaccg caggatttgg ctgttcgccc
      361 ttttccaatg cggtgatagc attttcaacg tacttgtttt tcaccgccga aggatcctgg
      421 gaattgtcgt cgatcgcgcc aatgtatgca atcgaaagat ccttcgtaag caagaataca
      481 tgcggcgtac gggttgcgcc gaattttgga tacacttgct gcttttcgtc gaagaggtaa
      541 gcgaagggat acgctttctc ttttgcacgc gcctgcatca tttcataact gtcttccggg
      601 ttcatttgcg ggttattggg attgatcgca acaaccgggt atcccaacgg cgcatacttt
      661 ttatgcaatt caattattct ttcttcatat gcttttgcaa aaggacagtg gttgcatgtg
      721 aagacgacga tatatccttt cacgttccga taatctttca gcgacaccat tttcccgtcg
      781 acattcttca gcgcgaaatc ttcggctttg tcgccgatct tataacccgc cggcgacgta
      841 agtttaaaac tgctcagcgt actcagcacc accacggagc agaagctgat cagaaatatt
      901 tttttcatag ctctcatttt taaatcaacg aagaaaatct aattaagatg tgcgccaatc
      961 cagctttcga gttgtttttg agagtcgaat ccgtgcccat aaaaaaattt ttcaccgtgt
     1021 actatcatca atgttaccgg gatcgcgcca tcccattggc tgtctacatt gggtatccaa
     1081 ttgtttgcgt cgccgtctgc aagtaagaca acttccggtt ttattttttt gtttttgacg
     1141 aatggtatca cctgtgtttc aagctgcatt ctgaagtcga ggcttaccag taagatcttg
     1201 aatttcttac cagcgaattt tttttcgagc gactggaaat aaggaagctc ttgaatgcac
     1261 ggtttgcacc atgttgccca aaagtttaca agcagcgttg tatcgcctga catgtgaaaa
     1321 cgcgattcga gttgcgggaa agaatcgtat atggtgactg tttgcgattt cacggcggtg
     1381 atggtcacca gcatgaaaaa gatagcgggc cagtatgctt ttctgcttcc cttcatattg
     1441 cgtgtgtctc tgccaattta gaaaatacat cggcgtgtac agttcagttg atcattcttt
     1501 gcgaaagatt aacggcctct ttcaataatc aatcacctgc tctacgatcg catcggggat
     1561 gtcgcgccat tcatattgct ggttccgaag ttgtggttca aatcctgcg
//
LOCUS       DASQJI010000313         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_956217,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000313 DASQJI010000000
VERSION     DASQJI010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956217"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VEV83_08710"
     CDS             complement(<1..360)
                     /locus_tag="VEV83_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HYK45234.1"
                     /translation="MPEVNELKIAQPVKSIAAKGYAAMAVSEDLQPFQFARRTPRPHD
                     VLVEILYCGVCHSDLHFVRNDWGMSVYPLVPGHEIVGRVEAIGDHVTKFKEGDLVGIG
                     CMVDSCRECDSCKQGLEQ"
     gene            complement(758..>1648)
                     /locus_tag="VEV83_08715"
     CDS             complement(758..>1648)
                     /locus_tag="VEV83_08715"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HYK45235.1"
                     /translation="EAGSAVKKFKKGAKVLSPFTTSCGKCFYCRVGLTCRCEKGNLFG
                     WVEHGHGLEGAQANYVRVPMADTTLLSLSDDLKEHKGLLLGDVFSTGYFCAQNAGIKQ
                     KGSKLLNAVYVVIGCGPVGLMTIVAARHLGAENLFAVDSIPERLSLAKQFGAIPLNAS
                     MTDVNAQILDHTYGRGADAVMEAVGSEKTLRLAIDLVRPGGTISSVGVHTANNFAFSP
                     IEAYNKNLIYKTGRCPARFYSEKLLREEVPQRYPIEDIITHQFSLDDGAKAYNVFDKK
                     LENCIKAVLTPNTANIENSE"
BASE COUNT          426 a          398 c          367 g          457 t
ORIGIN      
        1 ttgttcaagc ccctgtttgc atgaatcaca ttccctgcag gaatccacca tacagccgat
       61 gccaacaaga tcgccttctt taaattttgt tacatggtca cctatggctt cgactcttcc
      121 cacgatctca tgacccggca ccaatggata aacagacatc ccccaatcgt tgcggacaaa
      181 atgaaggtcg gagtgacaaa cgccgcaata aagtatctct accaatacat catgcggacg
      241 aggtgtgcgt ctcgcaaatt ggaatggttg caggtcttct gataccgcca tggcagcata
      301 accttttgcc gcaatagact tgaccggctg cgcgattttt aattcattta cttcaggcat
      361 aaaaaatttt ttttttgaag tgagtaatca gtatttgagg cgtgggagac gcgtttgatc
      421 tcgggggtaa aaaataaaat tatttttttt ggactatcta tgagcattgc tattttgatc
      481 tcccaatcaa tcagacgaag tggtaaaagt aaactgtttc ccgtcagaac aatccaaaga
      541 caacaagaag atgattgaat ctgctaaatc ttcagcctat tcggttcata gtgccggttg
      601 caaagcacag gcagaatcgt tccttcccaa caccgtcgct atcttcttta ctgcgggatt
      661 cattggaacg ggaaacagta ttatgccagc ggagataatt agtacatggc gcgacagtgc
      721 ctttgcattt gttattgcat agcgcccgtt tcaaatgtca ttctgaattt tcaatgttcg
      781 cagtatttgg tgtaagtact gcctttatgc agttctcgag ctttttgtcg aatacattgt
      841 atgcttttgc accgtcgtct aacgaaaact gatgagtgat gatatcttca atagggtagc
      901 gctgcggaac ttcttcccgc aaaagttttt ctgaataaaa gcgcgccggg caacgccccg
      961 ttttgtaaat aagatttttg ttataggcct cgatgggaga gaacgcgaaa ttgtttgcgg
     1021 tatgcacacc aacagatgag atcgttccgc cgggacgcac aaggtcgatg gccaatcgta
     1081 atgttttctc gctccccact gcctccatta ccgcgtcggc gccacggcca tatgtgtgat
     1141 ctaaaatttg tgcgttaacg tcggtcattg acgcgtttaa tggaatcgct ccgaattgtt
     1201 ttgcaagcga tagcctttcc ggaatagaat caacggcaaa caaattttca gcgcccaaat
     1261 gcctggcggc gactatggtc atcaaaccta cgggtccgca gccgatcact acatatacag
     1321 cgttcaaaag tttgctgccc ttctgtttta tgccggcatt ttgagcgcag aaatagccgg
     1381 tagaaaaaac gtctccaagc aacagccctt tatgttcttt gagatcatca ctcagggaaa
     1441 gcaacgtagt gtcggccatc gggacgcgca cgtaattcgc ctgcgctccc tcgaggccat
     1501 ggccatgctc aacccatccg aacaaatttc ctttttcgca gcggcaggta aggccaacgc
     1561 ggcaatagaa gcacttgccg catgacgtcg tgaaagggct gagaactttt gcgcctttct
     1621 taaatttttt tactgcgctg cccgcttc
//
LOCUS       DASQJI010000314         6974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1109287,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000314 DASQJI010000000
VERSION     DASQJI010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6974
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109287"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VEV83_08720"
     CDS             complement(<1..848)
                     /locus_tag="VEV83_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45236.1"
                     /translation="MQRRRSVAFHTLGCKLNFSETSTLSRLLEEEGFDKKEFTDEADV
                     YVINTCSVTDNADKECRQIVRRIQRKAPESIVVITGCYAQLKPNEIAAIPGVDLVLGA
                     AEKFNITEHLKELTKNDSAKICSCEIDAVQDFHSSYSLNDRTRTFLKVQDGCDYNCSF
                     CTIPLARGRSRSDTILHVIKNAKRIAGKRVKEIVLTGVNLGDFGRSDLTTSIPKRDHE
                     PGFREETFSELIHHLDDVDGIDRYRISSIEPNLLTNEIIEFVASSKKFMPHFHIPLQS
                     GSNRILG"
     gene            complement(875..3358)
                     /locus_tag="VEV83_08725"
     CDS             complement(875..3358)
                     /locus_tag="VEV83_08725"
                     /inference="COORDINATES: protein motif:HMM:NF026255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45237.1"
                     /translation="MKKTLLYFFILFSFFICASARAQQNATISGKVTASEKPVEAASI
                     ALLKIKDSSTVKVEVTDKQGNFQFENIKPGNYLVQADVLGYKKIFTPSFQVSNTNSTV
                     HLDEIKLTEELKELMAVNVTANRPLIENKADKTVVNVDASPTNSGLTALEVLEKSPGV
                     NVDNDGNIKMKGKQGVKILIDGKPSYLQGQDLVNYLRNLPANQLDQIELMTQPSAKYD
                     ASGNSGIINFKTKKNKNNGFNGSITTSAIIARYFKNTNSLNFNWRQGKINVFGNFGYS
                     AWKGFNDIYIDRSFRDSASVPFNRYYQQHTYGRYSNYPFNFKSGVDFFANKTTTVTLT
                     VDGLVDGSRFKSNSTSNIYDSLKNFVQYNDALSENHNPWTNVGFDLSLQKKLKKGGEL
                     DLDGDYIFYDTKGNTYSYNYLKNPDGSLVADTSAPNPYLLNGDLPAHIDIYSFKADYS
                     QPLKNNLTFEAGVKLSYVKTDNDALYTLYDTVTDKWYLDQARTNHFIYKENINAGYVN
                     FQKQFKKFSVQLGLRAEQTISDGNQVIKNETFHKNYTQLFPTSYFSYKLNDNNTFSLS
                     YGRRIERPSYQDLNPFQFQLDRYTYMQGNPDLQPQFSHNIELSYNYKGDLNFTVNYTD
                     VTDIINDVLETVKDGENYSTFQTKENIASNRNIGLSVNYNKQLKKWWSINVFGNVYNN
                     KYKGVIGDEPIDINITAFNGNLNNQFTFKKGWRAELSGFYTSKDWVSSNILGDPIGMF
                     SLGGSKTILKNKGTVKVNVRDPFYLMHFTGNTELDGFTAHIHSTWDNRRLIFTFVYRF
                     GKTNGQQQRRRTTAAEEEQNRVNTGGGQQ"
     gene            3537..4028
                     /locus_tag="VEV83_08730"
     CDS             3537..4028
                     /locus_tag="VEV83_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45238.1"
                     /translation="MKQILILILLIPVIAQAQRQISTSPKWFIVDSDAAVIPAFNDLV
                     LARAQGFTMVKVDSSGDALTYSFKNNKNEQIQIFYKIEAVSFPPARAIKYFGVTAPND
                     IMIDFYNGYLGTNLQSCEEVCYVNGRTFVYHDQVYIARATQLLTPKGKPNGYASVSFS
                     STH"
     gene            4243..>6974
                     /locus_tag="VEV83_08735"
     CDS             4243..>6974
                     /locus_tag="VEV83_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HYK45239.1"
                     /translation="MSFKRINNITGWVICLIACTVYIMTSEAGGSLWDCGEFVSSCFK
                     LQIPHPPGAPLFVLIGRVFIILFGDHPLTAAKGVNVMSALSSGFTILFLFWTITHFAR
                     RIALGESRDNNQLTKLQLIAIMGAGIVGSLAYTFCDSFWFSAVEGEVYAMSSFFTAIV
                     FWAILKWEHVADEPGADRWIVFIFFMMGLSIGVHLLNLLTIPAIVMVYYFRKREHFSY
                     ATLRKWFIRIILAGGVLAFIAALVGASAAADSARGIPMDATVAGLMILGTLAAVGLLF
                     AVESYNKDRKDYYGGIYIFFLIGCVLVGVVQVGVIQVSIKGAGLFDIFAVNSLHLPFS
                     SGFTIFFILVAVLIWFGLRYASRKNWYYLRLGLWCLTFMLIGYSSYITTLIRSNADPA
                     VDMYNVDNPMSLVGYLGRDQYGDFPILYGQKFTANPINSKEEYTYQKSKDDYIKVVRS
                     YKYVYNKADEMVFPRMWDASNDQGHADYYAMFMNIRKTEDGKYERAPTFMDNVRFLVS
                     YQTYFMYLRYFFWNFSGKQDDLQGLATGNVRDGNWITGISFIDNSMYGDQSVLPDSLK
                     HNKAHNTMFMLPFILGLIGMFYHFRKKGSDALVNMLLFFFTGFAVIIYLNQPGYQPRE
                     RDYAYVGSFYAFAVWIGLAVPYFIELAASWDQKLLKSTLISGGVVAALFLLGGLGAGA
                     GIGLALGFAVLFGAIAAGIPYILKTAKSNQAITYASVLIALAVPILMGQQEWDDHDRH
                     KKELARDVAKDYLESCAPNAILFTFGDNDTYPLWYAQEVEGVRPDIRVINTSLLGTDW
                     YINQLRYKVNESAPIDVIMTPAQIEGNQRDVVFFNGNPQFPEDRYYDLYQMMKDYVGS
                     DVSLVDAQNGNRYNTFPVHKVALPVDANAVKANGTVNATDSVVDAVRFVIPKDNL"
BASE COUNT         1740 a         1545 c         1594 g         2095 t
ORIGIN      
        1 cccaaaattc gattgctgcc actttgcagc gggatatgga aatgaggcat gaacttttta
       61 ctggatgcaa cgaactcaat tatttcgttg gttagcaaat tcggctcgat cgaagaaatg
      121 cggtaccggt cgatgccatc cacatcatcc aaatgatgta taagttcgga aaaagtttct
      181 tcacggaatc ccggttcgtg gtctcgtttg ggaatggatg tggtgaggtc gcttcgccca
      241 aagtctccga gattcactcc ggttaaaaca atttccttca cccgttttcc tgcaatgcgc
      301 ttcgcatttt ttatcacatg cagaattgta tcgctcctgc ttctcccgcg cgctaatggg
      361 attgtacaga atgaacaatt gtaatcgcac ccgtcctgca cttttaaaaa agttcttgta
      421 cgatcgttta atgagtagga ggaatgaaaa tcttggacag catctatctc acaactgcag
      481 atcttagccg aatcattttt cgtgagctct ttaagatgtt ctgtgatgtt gaatttttcc
      541 gctgcgccaa gtaccaggtc aacgccggga attgcagcaa tctcgtttgg tttcaactgc
      601 gcataacaac cggtaattac tacaatgctc tccggcgctt tgcgttgaat tcttcttaca
      661 atttgccggc actctttgtc ggcattatcg gtaacggagc aggtattgat aacgtacaca
      721 tcggcttcgt cggtaaattc tttcttatca aaaccctcct cttccagtaa acgggaaagc
      781 gttgaagttt ctgagaaatt caatttacaa cccaacgtat gaaatgcaac cgaacgccgc
      841 ctttgcatag gccgcaaaga taacatgcaa gaccttattg ctgcccaccg cccgtattca
      901 cccgattttg ctcctcttct gcagccgttg ttctccttct ttgttgctga ccgttcgttt
      961 ttccgaatct gtagacgaaa gtgaagatca gcctgcggtt atcccaggtg ctgtgaatat
     1021 gcgccgtgaa tccatccagt tcagtgttgc cggtaaaatg catgaggtag aacgggtccc
     1081 tcacatttac ttttacggtc cccttatttt ttaaaatggt tttgctgcca ccgagtgaga
     1141 acataccaat cgggtcgcca agaatgttgc tgctcaccca atctttcgaa gtataaaagc
     1201 cgctgagttc tgcgcgccag ccttttttga aagtgaattg gttgttcaaa tttccattaa
     1261 aggctgtgat attgatgtcg atcggctcat ctcctattac gcctttatac ttgttgttgt
     1321 agacgttccc gaatacattt atgctccacc acttcttcaa ttgcttatta tagtttaccg
     1381 acaagccgat attcctgttc gacgcaatat tttcttttgt ttgaaatgtg ctgtagttct
     1441 ccccgtcttt taccgtctca agcacgtcgt taataatgtc tgtaacgtcg gtatagttga
     1501 ctgtgaaatt cagatcgcct ttataattat aactcagctc tatgttgtga ctgaattgcg
     1561 gctgcaggtc ggggtttccc tgcatgtacg tataccggtc taactggaac tggaatggat
     1621 taaggtcctg gtaacttggc cgttcaattc ttcttccata cgataaactg aacgtgttgt
     1681 tatcattcag cttgtaacta aaatacgacg tcgggaacag ttgtgtatag ttcttatgga
     1741 acgtttcatt ctttattacc tggttgccat cagaaattgt ttgctcagcg cgcaatccaa
     1801 gttgaacaga aaattttttg aactgttttt gaaaatttac atatcctgcg ttgatattct
     1861 ccttataaat aaaatgattc gtacgcgcct ggtcaaggta ccatttatcg gtgaccgtgt
     1921 catacaaagt gtacagcgcg tcattatctg tctttacata gctcaatttt acacctgcct
     1981 cgaatgttag gttatttttc agtggctgcg agtaatctgc tttaaagctg tatatgtcga
     2041 tgtgagccgg cagatctccg ttcagcaggt aaggattcgg tgcgcttgta tcggccacca
     2101 gtgaaccgtc gggatttttc aaatagttat aagaataggt gttgcctttc gtatcataaa
     2161 aaatataatc gccatcgaga tccaactcac cacctttttt cagtttcttc tgcaggctga
     2221 gatcgaaacc gacatttgtc catggattgt ggttctcgga aagcgcgtcg ttgtattgga
     2281 cgaaattctt cagactgtca taaatattgg aagtggagtt cgacttgaac cggctgccgt
     2341 cgaccaatcc gtccacagtt aaggtaaccg ttgtcgtttt gtttgcaaaa aaatctacgc
     2401 cgcttttaaa attgaacggg taattcgaat accggccata ggtgtgctgt tgataataac
     2461 ggttaaacgg cactgacgcc gagtccctga agctgcggtc gatgtaaata tcattaaaac
     2521 ctttccatgc actgtagccg aaattgccga agacatttat ttttccctgc cgccagttga
     2581 agttaaggct gttcgtattc ttaaaatatc tcgcgatgat cgcgcttgtt gttatactgc
     2641 cattaaaacc gttattctta ttcttttttg ttttgaagtt gataatgcct gagttacctg
     2701 acgcatcata ttttgccgaa ggttgcgtca tcaactcgat ctggtcaagc tggttcgcag
     2761 gcaggtttcg caaataattc acgaggtcct ggccctgcaa atatgaaggt ttgccgtcga
     2821 tgagaatttt cactccctgc tttcctttca tcttaatgtt gccgtcatta tctacgttca
     2881 cgcccggcga tttttcgaga acctccagtg ctgttaaacc tgagttcgtt ggcgaggcgt
     2941 ctacattcac aactgtcttg tcggctttgt tttctataag tggcctgttc gcagtaacgt
     3001 ttacggccat aagttctttt aattcttctg taagctttat ttcatcaagg tggacggttg
     3061 agttggtatt actcacctgg aatgaaggag taaatatctt tttgtagcca agcacgtcag
     3121 cctgcaccaa ataattgccc ggtttgatat tctcaaattg aaaatttccc tgcttgtccg
     3181 tcacttcaac ttttacagtg gaagaatctt ttattttcaa cagggcaatc gatgcggctt
     3241 caacgggttt ttcggaagcg gttactttcc cggaaatcgt cgcattctgt tgagcgcgcg
     3301 cagaagcgca gatgaaaaat gaaaacagta taaaaaagta gagtaaggtt tttttcatgt
     3361 gatcgatttt ggcttttgga attgtgaaac gcaatttgaa atgaagcacc ggagaaaagt
     3421 tcttaaaaat ggacgggcgg aaatcatcgg atataattgg cagccgttca tccgaaacgc
     3481 ttcgtggatt aaaaattcag ccgatccacg aagtcaataa gcaataactt cgcaccatga
     3541 agcagatatt aattttgata ttgctgatcc ccgtcatcgc ccaggcacag cgccaaatat
     3601 ccacttcacc taaatggttc attgtagatt cagacgcagc cgtcatacct gcgttcaacg
     3661 atcttgtttt ggcgcgcgct cagggtttca ctatggttaa agttgattcg tcgggagatg
     3721 cgttaaccta ttcgtttaag aacaacaaga atgaacaaat acaaatcttt tataagatcg
     3781 aagcagtatc atttccgccg gcaagagcca tcaagtattt tggagtaacg gccccgaacg
     3841 atatcatgat tgatttttat aacggttatc tcgggacaaa tctgcaatcg tgcgaggaag
     3901 tttgttacgt gaatgggaga acgttcgttt atcacgacca ggtttatatt gcccgggcta
     3961 cacaacttct tactccgaaa gggaagccga atggatacgc ttctgtttcc ttcagcagca
     4021 cacattaagc tgaagaattg aacgcgaaac cgacaagtat agcggtattg ttcagcaggc
     4081 cgcttaggtt ttcacgtggt ttttttgacg gcgaaaatcc tttactacca ttcagggcac
     4141 gttgcaaaca attcttaaaa atatcggccc attttccatt ttcaattgtt tacattaggt
     4201 ttgctgcctt taaaaaccag gaccaatttc aaaaatttct acatgagctt taagcgcatc
     4261 aacaatatta cgggctgggt gatctgcctc atcgcctgta cggtatatat catgaccagc
     4321 gaagcaggcg gcagtttgtg ggactgtggt gaatttgtaa gcagttgttt taagcttcaa
     4381 attccccacc cgcccggtgc acccttgttt gtgctaattg gaagggtctt catcatcctc
     4441 ttcggtgatc atccgctaac ggccgcgaaa ggagtgaatg taatgagtgc cctgtccagc
     4501 ggttttacta ttttgttttt attctggacg ataacgcatt ttgcacgacg cattgcgctg
     4561 ggcgaaagcc gggataataa ccaacttacc aaacttcagt tgatcgcgat catgggtgcg
     4621 ggtattgttg gctcgctggc ctacacattc tgcgattctt tttggtttag tgcggttgag
     4681 ggcgaagtat atgcgatgag ctcttttttt acagcaatag ttttctgggc gatattgaaa
     4741 tgggaacatg tggctgatga gcctggtgca gaccggtgga tcgtgtttat cttttttatg
     4801 atgggcttat cgatcggtgt gcacttgctg aacctgctta ctatcccggc catcgtaatg
     4861 gtgtactatt tccgcaaacg tgagcatttt agttatgcca cattgagaaa atggtttatt
     4921 cgtatcatac tagccggcgg cgtacttgca tttatcgcag cgcttgtcgg tgccagcgcc
     4981 gctgccgaca gtgcgcgtgg aatcccgatg gatgccactg tcgccgggtt aatgatcctg
     5041 ggtacgcttg cggccgtggg ccttctgttc gccgtagaat cttacaataa agacaggaag
     5101 gattattatg gaggaattta tatcttcttc ctgatcggct gtgtgctggt tggtgttgtg
     5161 caggttggtg tgatccaggt ctccatcaaa ggggccggat tatttgacat atttgccgtc
     5221 aactcactgc atttgccctt ctcttctggg tttactatat tttttatcct ggttgcagtg
     5281 ctcatctggt tcggccttcg atatgcgtcg cgaaagaact ggtattatct gcggctcggg
     5341 ttatggtgcc tgacctttat gctgatcggc tacagctcat acatcactac acttattcgc
     5401 agcaacgctg atccggcagt agacatgtac aatgttgaca acccgatgag tttagtgggt
     5461 tatcttggcc gcgatcagta cggcgatttt ccaattcttt atgggcaaaa atttaccgca
     5521 aacccgatca attcgaaaga agaatatact taccaaaaaa gcaaggacga ctacatcaaa
     5581 gttgttcgca gctataaata cgtttataac aaagcagacg aaatggtgtt cccgcgcatg
     5641 tgggacgcga gcaatgacca gggccacgcg gactattacg cgatgttcat gaatatccgt
     5701 aagacggagg acggcaaata tgaacgggcg ccaacgttta tggataatgt caggttcctc
     5761 gtttcatatc aaacttattt tatgtatctc cgctatttct tttggaattt cagcgggaaa
     5821 caggacgatc tgcagggcct ggccacgggc aatgtgcgcg acgggaactg gatcacgggc
     5881 atttcattta tagataattc aatgtatggc gaccaaagcg tgttgcccga cagcctcaag
     5941 cacaacaagg cgcataacac tatgttcatg ttgcctttca tacttgggct tataggcatg
     6001 ttctatcatt tcagaaaaaa gggcagcgat gcacttgtga acatgttact gttcttcttc
     6061 acgggatttg cagtgatcat ctacctcaac caaccaggtt atcagccacg tgaacgagac
     6121 tatgcatacg taggttcctt ttatgcattt gcagtgtgga tagggctcgc cgttccgtac
     6181 tttattgaac tcgcagcgag ctgggaccaa aagttattga aatcaacgct tatttcaggc
     6241 ggcgtagttg ctgcattgtt cttattgggc ggattggggg ccggcgccgg tattgggtta
     6301 gcattagggt tcgctgtttt atttggagcg atcgcagccg gtattccgta tatcctgaaa
     6361 acagcgaaga gcaaccaggc aattacttat gcttccgtcc ttatcgcttt ggctgttccg
     6421 atcttaatgg gccagcagga atgggatgat cacgaccgcc acaaaaagga actggcacgt
     6481 gatgtcgcta aagactacct cgaaagctgc gcgcctaacg cgatcctctt tacgtttggt
     6541 gacaacgaca cttacccgct ctggtacgcg caggaagtgg aaggcgtgag gcccgacatt
     6601 cgcgtcatca acacaagtct attgggcacc gactggtata tcaatcaact tcggtataaa
     6661 gtaaatgaaa gtgctcctat agatgttatc atgacgcctg cccagatcga aggcaaccag
     6721 cgggatgtag ttttctttaa cggcaacccg cagttccccg aagaccgcta ctatgacctt
     6781 taccaaatga tgaaggatta tgttggaagc gacgtatcat tggttgacgc gcagaacgga
     6841 aaccggtata atactttccc ggttcacaaa gtggccttgc cagttgatgc gaatgcggtg
     6901 aaagctaacg gaacggttaa tgcaaccgac agcgtggtgg atgcggttcg ttttgtaata
     6961 ccaaaagata atct
//
LOCUS       DASQJI010000315         2947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1878594,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000315 DASQJI010000000
VERSION     DASQJI010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878594"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..808)
                     /locus_tag="VEV83_08740"
     CDS             complement(143..808)
                     /locus_tag="VEV83_08740"
                     /inference="COORDINATES: protein motif:HMM:NF020296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HYK45240.1"
                     /translation="MLPYHIQLQQQFVLHADPARAAGAKAYLLNQFEFYGIPMAERRK
                     VCRAFIKTNPLASINVVENVVKEAWKLPEREWQYFGIELLTHYKKQWRISTIKLIEYC
                     ITHKSWWDTVDWIADAWAGEYFTLFPEQTIAITGRWNRSDNMWLQRSSLLFQKKYKKT
                     TDTKLLSKYIVHLSASKEFFIRKAIGWILREYAKMDPAWVKNFVQSNELSSLSKREAL
                     KHL"
     gene            992..2062
                     /locus_tag="VEV83_08745"
     CDS             992..2062
                     /locus_tag="VEV83_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HYK45241.1"
                     /translation="MKILTEPIGSIPRPKYLVDAMGAFAQQQITENELSKLFDKALQD
                     TITRFEETGSPVITDGEQTKPSFATYPISGLTNLAPDGVVIPFADGHTRQLPKITSGP
                     FRYQTYASRYLEKAKQFTATPVKQAVISVSAISLLYPQDGIEGYSREQFIDDLLNEAE
                     SDIRKSLNSGAHNVQVDFTEARLSLKLDPTGGLLKAFIDLNNQAFARFTDEERRRIGV
                     HSCPGGDRDSTHSADISYSNLLPLLFDLNATNFYLEYAAEKDKGAVLESIREHIKPFQ
                     KVFLGVTNVLDPRIETAEEIRDAILEAAEIIPVAQLGTTDDCGFSPFADDLSTSRDTA
                     FAKIRSRIEGTKLAEQKLSQKS"
     gene            2384..>2947
                     /locus_tag="VEV83_08750"
     CDS             2384..>2947
                     /locus_tag="VEV83_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium transporter"
                     /protein_id="HYK45242.1"
                     /translation="MNHLTTPDYIVFLIYFIVVAVYGYWIYHKKKAKQMDSKDFFLAE
                     GSLTWWAIGASLIASNISSEHFIAMSGSGFALGLAISTYEWMASATLILVAIFFIPVY
                     LKNKIYTMPQFLARRYNDNVSTIMAIFWLLVYVFVNLTSIMYLGALAINSLSGISFES
                     CMIGLAIFAIIVTIGGMKVIGYTDVVQV"
BASE COUNT          848 a          652 c          622 g          825 t
ORIGIN      
        1 taatcaaatt tttacaagct tagtaagcag ctactaaaag tatggatttt tgaaatgcga
       61 agttgctttc tagtcataag cgcactctgc caatagccga atatcccaat aacccaataa
      121 cgaataacca ccaaactgca catcacaaat gtttcagcgc ttctcgtttg cttaatgacg
      181 acaactcatt cgactggacg aaattcttca cccacgctgg gtccattttt gcgtattcgc
      241 gcaatatcca accaatcgct ttgcgaataa agaattcctt tgacgctgaa agatgaacga
      301 tgtacttgct cagcaatttt gtgtctgttg tttttttgta tttcttttga aacaataaac
      361 tgctacgctg taaccacata ttatcagatc ggttccatct accggttatg gcgattgttt
      421 gttcgggaaa taatgtaaag tattcgcctg cccacgcgtc tgcgatccaa tcgaccgtgt
      481 cccaccagct tttatgcgta atgcaatatt caataagttt tattgttgag atcctccatt
      541 gctttttgta atgcgtaagc aattcaatac cgaaatattg ccattcacgc tccggaagtt
      601 tccatgcttc cttcaccacg ttttctacga cgtttattga agcaagcgga tttgttttta
      661 tgaatgcacg gcaaactttt ctgcgttcgg ccatcgggat accataaaat tcaaattgat
      721 tgagtaaata tgctttggca cctgcggctc gtgccggatc tgcgtgcagg acaaattgtt
      781 gctgaagttg gatatgatac gggagcatgc gttaaaaata aaaagaatat acccgcgtgc
      841 tccggcttca gattaattgt tttcgaatta taaagcattc caactttacc ggccactcac
      901 cagcgtgcag gaatgatgaa agatatctga tactggaccg gaatattgca gaacagtcgg
      961 tagcttcgaa ccaaactcaa aaaataatag tatgaaaatt cttacagaac caataggaag
     1021 cattccgcgg ccaaaatacc tggtagacgc aatgggcgca ttcgctcagc aacaaataac
     1081 agaaaacgag ctctcaaagc tctttgataa agcgttgcaa gatacaatca cacgattcga
     1141 agaaacggga tcgccggtta taacagatgg agaacaaaca aaaccaagtt ttgcaactta
     1201 tccgatcagc ggcttgacca atttagcacc ggacggtgtt gtgataccgt tcgccgacgg
     1261 ccatacgagg cagttgccga aaattacgtc aggtcctttc cgctaccaaa catatgcaag
     1321 caggtacctg gaaaaagcaa aacagtttac agcaacgccg gttaagcaag ctgttatttc
     1381 ggtttcagcc atcagtctat tgtacccgca ggatggcatt gaaggctatt caagagagca
     1441 atttatagac gatctgctga acgaggccga atcagatata agaaagagtt taaacagcgg
     1501 cgcccacaac gtgcaggttg attttacaga agcaagatta tcccttaagc ttgatccgac
     1561 gggtggccta ctaaaagctt ttatcgacct taataaccag gcgttcgcac gatttaccga
     1621 cgaagagcgg cgaagaatag gcgtccattc atgcccgggc ggcgatcgcg attctacaca
     1681 cagcgcagac ataagttact caaacctgct tccgcttttg tttgatctga acgcgactaa
     1741 tttttacctg gagtatgccg ccgaaaagga taaaggggct gttctggaat ctatcagaga
     1801 gcatatcaaa ccatttcaaa aagtatttct cggggttacg aatgttcttg atccgcgaat
     1861 cgagacagcg gaagaaatac gtgatgctat tttagaggct gctgaaataa ttcctgttgc
     1921 acaactaggc accactgatg attgcggctt ttcaccattc gcggatgatt tatcaacttc
     1981 aagagacacg gcgtttgcaa agatcagatc acgaatcgag ggaacaaaac tggctgaaca
     2041 aaagctctcg cagaaaagtt gaaacccgta tagctcgtgg gggatatact tttaacgcga
     2101 ataagcgcgc attcggaatc tgtaacagaa tgaaagtata gagagaacct gtcaggtttt
     2161 cattttcaaa aaaacgcaca acatttacta gtgccacggg ttctttaaaa aaccctgaca
     2221 gctttgtttt gaatagtaaa gcgatatcta aatcgacaga ccttacagaa cttcgcacct
     2281 gtcaggtctt cctttttcat ccgactcaat cttttcgact gaatttcacc ccgcacgaag
     2341 tttatttatt attttcctac ttcaaatagt ttcgaactgc tgtatgaacc atctcacaac
     2401 gcccgactac atcgtgtttc tcatctattt catcgtggta gctgtctatg gttattggat
     2461 ctatcacaag aagaaggcga agcagatgga ttcaaaagat ttttttctgg cagaaggttc
     2521 gttaacatgg tgggcaatcg gtgcatcgct gatcgcatca aacatttcat ccgaacattt
     2581 catcgccatg tcgggctcgg gctttgcact cgggctggca atttcaacat atgaatggat
     2641 ggcatcggcc acattgatcc ttgtggcaat ttttttcatc cccgtttatc tgaaaaataa
     2701 aatttacacg atgccgcaat ttttagcgcg gcggtataac gacaacgtga gtactatcat
     2761 ggcgatattc tggttacttg tttacgtgtt tgtcaatctc acctccatca tgtatctcgg
     2821 tgcgttagct ataaattctt tgtcggggat cagtttcgaa agttgcatga tcggccttgc
     2881 catttttgcg atcattgtta ccatcggcgg catgaaggtg atcgggtaca cggatgttgt
     2941 gcaggtt
//
LOCUS       DASQJI010000316         4151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_189072,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000316 DASQJI010000000
VERSION     DASQJI010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4151
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189072"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VEV83_08755"
     CDS             complement(<1..260)
                     /locus_tag="VEV83_08755"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HYK45243.1"
                     /translation="MKIAIINGPNLNLLGKRETDVYGNMPFEVYLEQLKLAFSSVAFH
                     YYQSNVEGELINEIQKVGFDYDGIVLNPGGYTHTSVALGDAIA"
     gene            complement(330..1505)
                     /gene="mqnE"
                     /locus_tag="VEV83_08760"
     CDS             complement(330..1505)
                     /gene="mqnE"
                     /locus_tag="VEV83_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HYK45244.1"
                     /translation="MSNGNSILSIVNDEKDASLRLIGEKILSNERINFDEGVLLFENS
                     SLAYVGALANYVREKLHGDKTYFNRNFHIEPTNVCVFACNFCSYSRLYAHRDEGWELS
                     KEQIMHIIQKYDGKPVTEVHIVGGVHPKMNFYFFADVLRSIRQHRPEIHIKGFTAVEL
                     DYMIRKAKLSIEEGLRLLHEAGLDSLPGGGAEIFHPDIREQICADKVDTDGWLNIHRT
                     AHRLGMHSNATMLFGHIEKYHHRVDHMERLRQLQDETHGFNTFIPLKFRNKENDMSNV
                     PESSLVEDMKTYAIARLYLDNFPHLKAYWPMLGRQNAQLSLSFGVDDLDGTIDDTTKI
                     YSMAGAEEKNPALSTAQLVSLIRQVKREPVERDTLYNEIKNYAHEDIHELEINPYYN"
     gene            complement(1600..2616)
                     /locus_tag="VEV83_08765"
     CDS             complement(1600..2616)
                     /locus_tag="VEV83_08765"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HYK45245.1"
                     /translation="MDIRTSEKSSKEKKQVRELHDNKRQKLWIGGYLLLAVACLLLYF
                     LFRLDIFDVIGTYRNTLLKLLLAAATCFGVLIIARITQGIVAKRSHTRAIQYNMVRLI
                     RLITIVIMVFVVISFLNANWYTAAVSLGLISLLLGFALQTPIASLIAWFYIVIRVPYK
                     VGDRIQLGQFTGDVVEINYFDTTLWEFAGNYMTNDLPSGRLIRFPNVMVFQFEVYNYS
                     WQKFPYIWNEIPFHISYQSDLDWVEKTIRTTAKKELGTGMEEHVRELRDLIKRTPVDE
                     LEIKEYPFVNFRINPNTWVEVLLIYLVDPKQASAVRTNLIRKVIAALLREPDKVMFPK
                     GDAR"
     gene            2764..>4151
                     /locus_tag="VEV83_08770"
     CDS             2764..>4151
                     /locus_tag="VEV83_08770"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HYK45246.1"
                     /translation="MKRKRTGKFLIYVFIGALMLVTVLLVGNALVKSVIQKKISATLQ
                     QFAPYVISDFSAIHVNLIGASVRIDSLVLRYQPVLDKNHSHAAYFQSVSITGICLLKF
                     ISSKDLSAANVRLDNALIKLDRFLLDRNDTIPSNAFNNVHLPFNTMFLNSVELRHVSV
                     LEVKNEKQDTLLNGELSIYNVRIYDIDSSFSKDSIHFSNVLCELNDIKYQLADYELLQ
                     IKKISINSSDSVLEINSLRIIPQLGKIAFGQKLGHQADRIEGTVAHIKVSGLNMPQLL
                     QKKFFAQELVISNAQMDVFRDRRLPREMKVQPTSLDYLKKIPIEVHIHHFKLNDALVE
                     SEEFPKEGAQTGSIKMDHINIDISPLVNHPKKNDPAFLTTIVRGSIMNAGSLHATIRL
                     DLSSGAQYIKGTIADLKLPALNPCAENLGKFHIQSGVLNKLDFQFTATNEKASGQIVG
                     VYHDLVIDRLKL"
BASE COUNT         1190 a          946 c          840 g         1175 t
ORIGIN      
        1 gcgatcgcat cgcctaaggc aacagatgtg tgggtatacc cgccgggatt caagacaata
       61 ccatcataat cgaaaccaac tttttgaatt tcgttgatca gctcgccttc tacattgctt
      121 tgatagtaat gaaaggcgac actggaaaaa gcaagcttta attgttcaag gtatacttca
      181 aaaggcatgt ttccgtaaac atccgtttcg cgtttaccca gcaagtttaa attgggaccg
      241 ttgatgatcg cgatcttcat gccactaaaa taagaaatac cggcttaaag gtatgcgggg
      301 ttgtgcccgc gtgtagtttt tgttaccttc taattgtaat acgggtttat ttccagctca
      361 tggatgtctt cgtgagcata attctttatc tcattatata gtgtatctct ttcaacaggc
      421 tcgcgtttta cctgcctgat gagagatacg agttgcgctg tggacagcgc agggtttttt
      481 tcctcagccc cggccataga atagatcttt gtcgtatcat cgatcgtgcc gtcgagatcg
      541 tcaacgccaa atgataaact cagttgtgcg ttttgcctgc cgagcattgg ccagtacgct
      601 ttcaggtgag gaaaattatc gaggtataaa cgcgcaatgg catacgtttt catgtcttcg
      661 accaatgaac tttccggaac attactcatg tcgttttctt tgttgcggaa cttgagtggt
      721 atgaacgtgt tgaagccatg cgtttcatcc tgcaactggc gtaagcgttc catatggtca
      781 acgcgatgat ggtatttttc gatatggccg aataacatcg ttgcatttga atgcatgccc
      841 aaccggtgcg cggttctgtg aatattcagc cagccatcgg tatcaacctt gtctgcgcag
      901 atctgttcgc gaatatcagg atgaaagatc tctgcaccgc cgccgggtaa agaatcaaga
      961 cctgcctcat gcaataaacg aagcccttct tctatgctca gctttgcttt tcgtatcata
     1021 taatccagct cgaccgccgt aaagcccttt atgtgaattt caggacggtg ttgcctgatc
     1081 gatcttaaca cgtcagcaaa aaaataaaaa ttcattttag gatggacgcc gccaacgata
     1141 tgcacttccg tcacaggttt gccatcgtat ttctgaatga tatgcattat ttgctctttg
     1201 ctgagctccc agccttcatc acggtgagca tacagccgcg agtaagaaca gaaattacag
     1261 gcaaatacac atacattggt tggttcaata tggaaatttc gattgaaata cgttttgtct
     1321 ccatgcagtt tttcgcgaac ataattcgct aacgctccca cgtaagccaa cgaagaattt
     1381 tcaaacaaca aaacaccttc gtcgaaattt atgcgttcgt tgcttaatat tttttcaccg
     1441 atgagccgca gactggcgtc tttctcatcg ttcactattg acaaaataga atttccatta
     1501 ctcatttggc aaagttacta acccgcgtca aaccaccata tgaaaatgaa agaactaagc
     1561 ctcgcctcaa acatcaaact tcaaacttca aacatctggc tacctcgcgt ctcctttagg
     1621 aaacatcacc ttatccggtt cccgcagcaa agcggcgatc acttttctta tgagattcgt
     1681 gcgaaccgca gaagcctgct ttgggtcaac caaataaatc aaaagcacct caacccaggt
     1741 atttgggttg atacgaaaat tcacaaacgg gtactctttt atctcgagct catcaacagg
     1801 agtgcgtttt atgagatcac gcagttcgcg cacatgttct tccatgcccg ttcctaattc
     1861 tttttttgca gtagtacgaa tcgttttctc tacccagtcc aggtcgcttt gatatgaaat
     1921 atgaaacggg atctcgttcc agatgtaagg aaatttctgc caggaataat tatacacttc
     1981 aaattgaaac accatcacgt ttggaaacct gatcagtcgt ccactcggaa gatcgttcgt
     2041 catgtaatta cccgcaaact cccacaaggt cgtgtcgaaa taattgatct caactacatc
     2101 gcccgtaaat tgcccgagct ggattctgtc gcccacttta tatggcaccc gtatcacgat
     2161 ataaaaccag gcgatcagtg atgcgatcgg cgtttgtaaa gcaaagccaa gcaacaacga
     2221 gatcaggccc agggaaacag cggctgtgta ccagtttgca ttaaggaagg aaatcacgac
     2281 aaacaccatg attactattg tgatcagcct gatcagcctc accatattat actgtattgc
     2341 gcgggtatgc gaacgttttg caacgatgcc ttgcgttatc ctggctatga tcaggacccc
     2401 aaaacacgta gccgccgcca gcaataactt caacaacgta tttcggtatg ttccaataac
     2461 atcaaaaatg tccagcctga aaagaaagta cagcagaagg caagccacgg ccagtaacaa
     2521 atagccgccg atccataatt tttgtcgttt attatcgtga agttctctta cctgtttttt
     2581 ttccttcgaa gatttttctg aggtccggat atccatgcgg ttttaaatac aaaggctgta
     2641 ccatgtataa attcatcgtg agtgcgcatg gcctaccgtt gtgcagaagc aatagcgaag
     2701 tctcgcaatg cagacaacca aacgggcata ttaccagttc attattgtta aagccagcct
     2761 cctatgaaaa gaaaaagaac agggaagttt ttgatctatg tgtttatcgg cgcattgatg
     2821 ctggttactg ttctcctcgt tggaaatgcg ctggtaaaat cagtaattca aaaaaagatc
     2881 agcgccacgc tacaacagtt tgctccctat gtgatcagcg atttttctgc gatccatgta
     2941 aatctcatcg gtgcttctgt tcggatagac agtcttgtgc tgcgctatca acctgtgtta
     3001 gataaaaacc atagtcatgc cgcttacttt cagtctgtat cgataacagg aatttgtttg
     3061 ttgaaattta tttcatccaa agatctttcg gcagctaatg tacgtctgga taatgcgctc
     3121 ataaaactcg atcgatttct gctagatcgc aacgacacca ttccatctaa cgcttttaac
     3181 aacgttcacc tgccattcaa taccatgttc ctgaactccg tcgaattacg gcatgtaagt
     3241 gtattggaag ttaagaatga aaagcaagac acgttgctta atggcgaact ttcgatctat
     3301 aatgttcgca tttatgacat cgactcatcg ttttcaaaag acagcataca tttttcaaat
     3361 gttctttgcg aattgaatga tatcaaatat caattagccg attatgagtt gttgcagata
     3421 aaaaaaattt caatcaatag cagcgattcc gtgcttgaaa taaactccct cagaataatt
     3481 cctcaattag gcaaaatcgc atttggccaa aagcttggac accaggccga tcgaattgaa
     3541 ggcactgttg cgcatatcaa agtttcgggc ctcaacatgc cgcagttgct tcaaaaaaaa
     3601 ttttttgcac aggaattggt aatcagcaat gcgcaaatgg atgtttttcg cgacaggcgt
     3661 ctgccacgtg aaatgaaggt gcagcccacg tcgctcgatt atctgaaaaa aattccgatc
     3721 gaagtgcaca ttcatcattt caaattgaac gatgctttag tggagtcgga agaatttcca
     3781 aaagaaggtg cacaaacggg atctataaaa atggatcaca tcaatatcga catatctccg
     3841 ctcgtcaatc atccgaaaaa aaatgatcct gcttttttaa cgacgatcgt tagaggatcg
     3901 atcatgaatg ctggttcatt acacgcaaca attcgtctcg atctgtcgag cggtgcacaa
     3961 tacattaagg gaacaattgc tgatttgaag ctgccggcat tgaacccttg tgcagaaaat
     4021 ctcggaaagt ttcatataca aagcggcgtg cttaacaaac tcgattttca attcactgcc
     4081 accaatgaaa aagcatcagg gcaaatcgtc ggcgtttatc atgatctcgt tatagacagg
     4141 ctaaagctgg a
//
LOCUS       DASQJI010000317        28252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2032904,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000317 DASQJI010000000
VERSION     DASQJI010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 28252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28252
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2032904"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..703
                     /locus_tag="VEV83_08775"
     CDS             23..703
                     /locus_tag="VEV83_08775"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HYK45247.1"
                     /translation="MKVIRKHPLAIRWFHWINFPVLGIMIWSGLLIYWANGVYKIAVA
                     DTTIIKFFPDGFYKALKVPFHLAKGMSFHFAFAWLFVVNGIVYVAYTIFSGEWRYLVP
                     NRRSFREAWQVLLHDLHIRKYQPPQLKYNAAQRIAYTLIILMGIGSVWTGLAIYKPVQ
                     FWWMAWMCGGYEAARVEHFILTIGYVVFFLIHIVQVIITGWNNFQAMISGLEVIKPAK
                     PIHSNEEA"
     gene            690..1463
                     /locus_tag="VEV83_08780"
     CDS             690..1463
                     /locus_tag="VEV83_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYK45248.1"
                     /translation="MKRPDFFSKRTKEIRPSSFRRRAVFSFVSFAVLLLVAIFFWKWL
                     NHQPTEQGALKPLRKTLEANEKILKTAVFDTDHLAKEFPEKDAVKNVRVNGLIGMEKT
                     IDTSTWRLNVVRSTGDTLKLSLDDIKKLPRKDVIFDFKCIEGWSQVTHWAGVPLKTFM
                     QYYHLDAQEKLSYVGLQTVDKKYYVGIDMPSAMQSQTILCYEMNNKALPMNQGFPLRL
                     IIPVKYGIKHLKQIGTIYFSNQKPPDYWAERGYDYYAGL"
     gene            complement(1464..1640)
                     /locus_tag="VEV83_08785"
     CDS             complement(1464..1640)
                     /locus_tag="VEV83_08785"
                     /inference="COORDINATES: protein motif:HMM:NF042817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6728 family protein"
                     /protein_id="HYK45249.1"
                     /translation="MGIWRQIQEYLFIKKRDPNAPYNKYIKYMHGMNRISLIMFLVAV
                     IIMLIRFVIVPLFR"
     gene            1834..3180
                     /locus_tag="VEV83_08790"
     CDS             1834..3180
                     /locus_tag="VEV83_08790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45250.1"
                     /translation="MWLQNVFVSAYGLQWKQRRFGGIFSEEYRKAKERESFTAQQWSD
                     YQDWHLQRILHHAFDHVPYYKKAFEEQNISRQSLAKLSANALSKLPVLLKEDLRRFGT
                     STLLSDKKEKGGLFFPSSGSTGTPTQILFSHAMHQRVFALMESRVRNWAGVNSFMPRG
                     MIGGRRVVPNAYALPPYYRYNRAEKQVYFSAYHISKNNAQDYLAAIKKYGVQYMTGYA
                     MSNFLLASFMDELDLTAPHLRCVITSSEKLTPKMREVFLKVYGCKTFDGWSGLENCGL
                     VSECEQGSLHVSPDAGIIELLDDKMQPVDAGSPGRVYCTGFLNYDQPLIRYDIGDTMV
                     ASNESCACGRHMPVIREIIGRNEDVVYGKDGRAMVRFHSIFNGLRSIKQAQVIQESTE
                     LIRIKVVPDGNVAPQELVIMKERIRSQLGDVDVLIEQVETIDQTKNGKFKAVISRL"
     gene            3259..5286
                     /locus_tag="VEV83_08795"
     CDS             3259..5286
                     /locus_tag="VEV83_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HYK45251.1"
                     /translation="MPRKLLLLSLVLFLIFAKGSSQSCTALGQNPGTAFPVCGTSTFQ
                     QDIVPNCGGRNVPTPGCNNAAYQDLNPFWYKFTCFQTGTLGFVIVPIDQGDDYDWQLF
                     DITGHSPDEVYTDPRLVVACNWSGNFGNTGASSGGTSLVNCAGPAYPTFSSMPTVIKG
                     HDYILLISHFTTFKPGDAGYSLSFGDGTSVITDPEPPAMLSARSSCAGETIYVKLNKE
                     MKCNTLASNGSDFSISPPLANVKSATGIGCSSGFDLDSVVIDLDKPLPPGNYSLVAKN
                     GGDGNTLLDNCSNGIPDLDSIPFVVYAIQPTPMDSLSAVLCAPDVLQLVFRNPMDCNS
                     IAKDGSDFVVKGTQPVAVAGAYGVNCTNGLSSIIAVKLSKPIQTAGAFTLSLQTGSDG
                     TTLLDECAQETPPATLSFTTADTVSANFNYRVGLGCVFDTLFYSYSDKNQVNQWNWTF
                     DLNGTSTTENSYFLFNDYGSKHIQLACSNGVCTDTAAVDIALDNELLARFKVAPSPEL
                     CPEDGAIFTDSSIGKILSWHWIFGDGSGSSMENPPLKMYPPSDTRDGRIYPVSLIVKN
                     DLGCYDTSVADMKVLYNCYIAVPSGFTPNGDGLNDYLYPLNAYKADGLEFKVYNRWGQ
                     LVFQTRDWTRKWDGKINGEPQAAGTYVWMLSYTHHDTGKHYSLKGITVLIR"
     gene            5374..5898
                     /gene="idi"
                     /locus_tag="VEV83_08800"
     CDS             5374..5898
                     /gene="idi"
                     /locus_tag="VEV83_08800"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HYK45252.1"
                     /translation="MEQVILVNEKDQQTGVMEKMEAHRQGSLHRAFSVFILNTKGEML
                     LQQRSMNKYHSAGLWTNACCSHPRPGELTEDAAARRLKEELGFETPLRKIFDFTYHAS
                     LENGLTEHEFDHVFFGRYSGDINFNTHEVQEICFRSLGDIQTSLQTHPYKFTSWFHIA
                     FPKLSEWMQSNSDF"
     gene            5979..6926
                     /locus_tag="VEV83_08805"
     CDS             5979..6926
                     /locus_tag="VEV83_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK45253.1"
                     /translation="MTRDKILVIGASGQIGVELTLALRNLYGNANVVASDLREENQLL
                     KGSGPYVSLDVMNKEMLHVQVIRQNVTQIYLLAAILSATGEKNPGLAWNLNMQGLLNV
                     LDIAREEKLKKVYWPSSIAVFGPTSPKKNCPQQTIIEPITVYGISKYAGEFWCNYFNK
                     RFGVDVRSLRYPGLISYKSEPGGGTTDYAVEIFHDALEEGRYECFLKQDTYLPMMYMP
                     DAIRATIELMEAPAEKISVRTSYNISAISFSPAEIAACIKEHVPQFEINYKPDYRQAI
                     ADSWPQSIDDTVARKDWNWRPEYDLEKLTADMLKNLQPA"
     gene            7023..7652
                     /locus_tag="VEV83_08810"
     CDS             7023..7652
                     /locus_tag="VEV83_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45254.1"
                     /translation="MRFFSLLLLCFLCKVAFSQDDIPDYRSRKDNFSKMMEKDLRADI
                     SQFSFAGIGESLTKHKLDQIPVKNVTQDSILFANDTMSVHITTGNFDASKHKVSWADD
                     KYAVKLDNHPFWGTENKVPKHTIASVVVIFRSDTLLIPPAAYGDLYEPHFFYTDASGA
                     TKTYCNVYVSADHRKQYIYMLNGEGTGRYEVTWIIQDKHYLRRVVDWGF"
     gene            complement(8011..8808)
                     /locus_tag="VEV83_08815"
     CDS             complement(8011..8808)
                     /locus_tag="VEV83_08815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45255.1"
                     /translation="MRKRIFFSFAIILSSMMLSATAQNKAYLVLEYMHVKPGNDAAYI
                     QTETLWKKIHQQRQKDSTILDWNVWAVTLPYDMNAEYQYVVGTVYPSMDAFLNGYAKV
                     DLHKIFPGLSDDGVNSLLTTSAASRDMVRSTVIELLYNDGFNGKSTPTYVLATAMKAT
                     PGKEGDYESLETKDWGPIHKDLIKNGFESAFSFGRLMFPADANSPYNYIIFRFFDKAA
                     MMDKQDKADWNKYNTANPAAFTSAGTLRTEVHTELLTKVVSLKDDAK"
     gene            complement(8987..9880)
                     /locus_tag="VEV83_08820"
     CDS             complement(8987..9880)
                     /locus_tag="VEV83_08820"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HYK45256.1"
                     /translation="MQNENKEEDLKAPFKAGATVTVVGVGLISGSFALALKEKDLAKH
                     IIGVSRTEASGKKALELGLIDEVLPLREAVLKSDFIYVAIPVDVTIPVMQEIMDLVTD
                     KQIVADAGSTKFVLSKALEHHSMRKRFVSTHPMWGTEYSGPESAVRNAFIGRSCVICD
                     KERSDPKAVTIVEEIYKQLGMDIVYMDSESHDVHAAYVSHISHITSFALANTVLEKER
                     EEETIFELSGGGFESTVRLAKSTASMWVPIFMQNRENVLDVLNEHISQLRKFKASLEK
                     ENVAFLTELIENANRIKKIIK"
     gene            complement(9950..11134)
                     /locus_tag="VEV83_08825"
     CDS             complement(9950..11134)
                     /locus_tag="VEV83_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK45257.1"
                     /translation="MIHIAERLQGVGEYYFSRKLREIEELNRQGKNVINLGVGSPDQP
                     PHPDVIRTLQEESAKPNVHAYQSYKGSPILREAFARWYEEWYSVKLDAASEILPLIGS
                     KEGIMHICMTYFENGSAVLVPNPGYPTYASAVKLSGATPLYYDLKEENKYQPDFNQLE
                     NLIREGSKFPLQGVRGLFVNYPHMPTGQKALKSTFEQLIVFARKHDILICHDNPYSFI
                     LNEEPLSLLSVEGAKDVVLELNSLSKSHNMAGWRVGVLCGAKERIDEVLRFKSNMDSG
                     MFLPVQLAAAKALSLDKSWYEKVNDVYKRRREKAYELLHVLECDASRDQSGMFLWAKV
                     PERFKDAYELSDEVLYNKDVFITPGGIFGSAGDKYVRVSLCATEEKIEEAVKRVGGRG
                     KR"
     gene            complement(11148..11975)
                     /locus_tag="VEV83_08830"
     CDS             complement(11148..11975)
                     /locus_tag="VEV83_08830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HYK45258.1"
                     /translation="MSIKVSIQGYEGSFHQMAAIKFFGPSVEVIPCDTFQQVVKIASS
                     ADSSGGVMAIENSIAGSILANYNLLQRSSLTITGEIYLQIDQNLMVNKGVRLEDIREV
                     HSHPMALQQCFEFLDKHAWKLVETEDTALSAKHVHQHKSKHIAAIASTLAAELFDLKI
                     ISPNIHTMKNNYTRFLILQRDGHSKIAVDPDKASVNFHTDHSKGSLAKVLTKIADAGI
                     NLSKLQSFPIPGSDFKYSFHADLEFDSMNQFQTVIDNIKPITKYLKIYGVYKNGKIK"
     gene            complement(12299..12493)
                     /locus_tag="VEV83_08835"
     CDS             complement(12299..12493)
                     /locus_tag="VEV83_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45259.1"
                     /translation="MKKLLIVLAIGAFAACNSGTSSTTTDSTSTMGTDTMSSMPADTS
                     SMMTDTSSHMMDTTHTDTTK"
     gene            12639..13205
                     /locus_tag="VEV83_08840"
     CDS             12639..13205
                     /locus_tag="VEV83_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK45260.1"
                     /translation="MKSDTNEQLLLKGLAHNDSKAAETIYKDNFNMVLAFVLNNNGSY
                     EEAKDIFQETMITLYEKAKTDSFVLTCQIKTYVYSVSRRLWLKRLQQIGKTAPGIENY
                     EETVIVDDDLDLQERKNEEFRIMDRALNSLGEPCKTLLEAYYIQKKGMSEIATLFGYT
                     NADNAKNQKYKCLMRLKKLFFTQYNIGE"
     gene            13205..14317
                     /locus_tag="VEV83_08845"
     CDS             13205..14317
                     /locus_tag="VEV83_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HYK45261.1"
                     /translation="MEDILLLNSIERYLEGQMLPDERSFFEELRRNQPEIDQMVVEHK
                     LFLHQMHAYADKRNFKEQLHNIHTTLAETGEVKSSDHAYGFTGKVIELWHRYKRVTAI
                     AASIACITAIFISALAMYFSPAVDPSQLERLGRDIEQIKKNQQFTNRAINDVITSSKV
                     PKGAMLKSGGTAFLIDGKGYLVTNAHVLTGSGAIVVDNQGNEYNSRILSVDRKLDLAV
                     LKIDDHDFKAIKVLPYAVRRSQPDLGEELFTLGYPRDEIVYNMGYLSAKTGYQGDTAS
                     CQLSLTANPGNSGAPVFNRNGEIVGIISTKQTQAEGVVFALKSNNIFKMIDSLKTIDT
                     TFKNIVLPLNSSLKKMDRVSQVKKAENCVFLVKAYN"
     gene            14428..14910
                     /locus_tag="VEV83_08850"
     CDS             14428..14910
                     /locus_tag="VEV83_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45262.1"
                     /translation="MTQPLKCLVVVFAIGLTSCASIVSKSNWPFSIDSSPSAADVSIR
                     NKRGVEVFHGRTPAAMALKSGAGFFAKESYVVTLSMDGYETKKVNVECKLNGWYFGNI
                     LIGGIIGLLIIDPATGAMYRLDSKGMHMDLEASQKSTLKIIDLKDVPDSLKTSLVKLP
                     "
     gene            complement(14959..15858)
                     /locus_tag="VEV83_08855"
     CDS             complement(14959..15858)
                     /locus_tag="VEV83_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HYK45263.1"
                     /translation="MQSTIVILAAGIASRYGSMKQTQSFGPSGETIMEYSIYDAIEAG
                     FERVVFIIREDFADVFKGILEPKLKGRIQTDYVFQKFSSFTEGWEMNPERVKPWGTAH
                     AVLCCKGTVDAPFAVINADDFYGKDSYKKAFEFLKTRCDEKTYAVIGYQLANTLSEHG
                     TVSRGVISTNEKNEMTGIVERLKISRKGDKIVDDEDGHLVELPEDTKASMNFFCYHPS
                     FIDLCEVEFQEFLRDHSKELKAEFLIPTVTDDFIKRGKGKVEVIPTSSKWFGVTYKED
                     APIVQREIKRLVEKGEYPGNLWA"
     gene            15989..17602
                     /locus_tag="VEV83_08860"
     CDS             15989..17602
                     /locus_tag="VEV83_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HYK45264.1"
                     /translation="MNIESNRDHDWMKLLVSDVRNRFEKIKLGGGKKAIAKQREKNKL
                     TARERLSHLLDKAEPFIEIARFAGFEMYEEQGGCPAGGTVAGIGYISGRQCVVVANDQ
                     TVKAGAWFPITGKKNLRMQEIAMENRLPIIYLVDSAGVFLPMQDEIFPDKEHFGRIFR
                     NNAKMSSMGITQIAAVLGPCVAGGAYLPIMSDETLMVEGNGSIFLAGPYLVKAAIGEN
                     IDVETLGGAETHNAISGIADYKFDTEQECLDKIKKIIGKLGAPSSAGFNRIPAVAPAK
                     NIDSIYSIMHASNAKPYDVVQIIECIVDANTFEQFKEEYGQTIVCGYARVDGWAVGIV
                     ANQRLIVRTKKGEMQLGGVIYNDSADKAARFILNCNQKKIPLVFLQDVTGFMVGSRSE
                     HAGIIKDGAKMVNAVANSVVPKITIITGNSYGAGNYAMCGKAYDPRFIYAWPSARIAV
                     MGGDQAAKTLLQIHVSGKEVSEAEQNELLDKIKSRYDKQTSPYYAAARLWVDDIIDPA
                     DTREVISEGIRAANNNPEINELKVGVFQV"
     gene            complement(17627..18118)
                     /locus_tag="VEV83_08865"
     CDS             complement(17627..18118)
                     /locus_tag="VEV83_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-carotene hydroxylase"
                     /protein_id="HYK45265.1"
                     /translation="MTWLLYLLIAIVSFFTMEGITWLTHKYVMHGFLWWLHEDHHQKR
                     DHLFEKNDAFFIIFAIPSWLCIMLGSMQEAWWVVSIGSGIALYGFAYFLVHDVIIHQR
                     FRLFTRSNNRYVKAIRWAHKMHHRHLNKDDGESFGMLFVAKRYWEKIRRDEQLRKMQL
                     SES"
     gene            complement(18115..18807)
                     /locus_tag="VEV83_08870"
     CDS             complement(18115..18807)
                     /locus_tag="VEV83_08870"
                     /inference="COORDINATES: protein motif:HMM:NF016155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid biosynthesis protein"
                     /protein_id="HYK45266.1"
                     /translation="MTKKTALLNNTALFIALLFHVSGLIGILYTQQKDWFVQHTALNL
                     SLMAALLFITQQQKNLQFFLFFGITFISGFCVEIIGVNTAALFGNYNYGEALGPKLFG
                     VPLVIGINWFIIIYCTGAATQFYEDRILRTIAEKGFTVTARMQLISFITDAVLLAVFF
                     DWLIEPVAVKLGYWRWNNESVPVYNYICWLMISALLLWLFRTLKFNRHNIFAVHLLII
                     QLLFFFVLRTFL"
     gene            complement(18800..20299)
                     /gene="crtD"
                     /locus_tag="VEV83_08875"
     CDS             complement(18800..20299)
                     /gene="crtD"
                     /locus_tag="VEV83_08875"
                     /EC_number="1.3.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-hydroxycarotenoid 3,4-desaturase CrtD"
                     /protein_id="HYK45267.1"
                     /translation="MGRLKAYVIGAGVAGMATAVRLAMQNMDVTIFEKNNYPGGKLNL
                     VEAGGYRFDGGPSLFVQPEDLEELFQAADENIHEFLHYTPVEIACKYFYEDGTVINAY
                     TDKVKFSKELEDKTGEPAGAVLSYLNESKNIYEHVGDVFVNHSLHKISTFISPAVFKA
                     LISTRPSYIFSTLHDVNARKFQHSNTVQLFDRYATYNGSNPYTAAGMFQLLPNAEHNE
                     GVFYPEGGMISIANALAKLAEKKGVTFRFNSAIQHIVKKENKAVGVVANGETFFADSI
                     VSNVDAYFTYSRLLADEHTAKRILKRERSNSAVVFYWGIAKEFSQLDLHNIFFSEDYE
                     AEFDSIFRKKNLCADPTVYVNITSKCEPGIHAPVGKENWFVMINVPAGTATEDQELIA
                     TCRANILAKLSRMLKTDIESLIETERVLSPKLIEEQTGAYMGALYGSSSNSAAAAFLR
                     HPNFSKDMKRLYFVGGTVHPGGGIPLCLKSAKITAGIIASDVRKWKQND"
     gene            20535..20858
                     /locus_tag="VEV83_08880"
     CDS             20535..20858
                     /locus_tag="VEV83_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HYK45268.1"
                     /translation="MAKKSASKKAAAKKSAPKKWSKKVTNTSNALDLRSKVFTKDDPH
                     AIALSLKRSAERSKRKKGTPYQSAMSMLNFYINRAGKNLPEKQQQTLEKAKDELRAVF
                     DRQQK"
     gene            complement(20971..23121)
                     /gene="fusA"
                     /locus_tag="VEV83_08885"
     CDS             complement(20971..23121)
                     /gene="fusA"
                     /locus_tag="VEV83_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HYK45269.1"
                     /translation="MADLRLQRNFGIAAHIDAGKTTTTERILRYTGMIHRIGEVHEGA
                     ATTDWMEQEKERGITITSAAVSCQWNFPTQQGKPTADTKKYYFNIIDTPGHVDFTVEV
                     ERSMRVLDGLIALFSAVDGVEPQSETVWRQANRYGVPRIGFVNKMDRAGADFLNVVAQ
                     VKEMLGAKSVPLQLPLGSEENFKGVVDLIQMKGIIWDDATEGMTYKEVPIPEDMKEEA
                     EYWRAQLIEAVAEYDDKLMEKFFDNPDTITEDEVHEAIRKATIDLTIVPMLCGSSFKN
                     KGVQTGLDAVCRYLPSPADLPPTVGTDPDTGKEVSRKADPKEPFAALAFKIMTDPFVG
                     RLAFFRCYSGRLEAGSYVKNMRSGKNERISRIMKMFANKQNPMDAIEAGDIAAAVGFK
                     EIKTGDTLCDEDHPIVLENMFIPEPVISVAIEPRTQADVDKMGMAIAKLVEEDPTLRV
                     KTDEDTGQTILSGMGELHLEIIVDRMRREFKVEINQGNPQVAYKEAFTKAIEHREVLK
                     KQTGGRGKFADIQFEIGPADKEWVQENPGKSFQFVNDLFGGSIPREFVPAISKGFESS
                     MGTGVLAAYPMESMKVRVFDGSFHAVDSDSMSFELCAKSGFREAGKKAKPVLLEPIMK
                     VEVVTPDQYMGDVTGDLNRRRGMLEGMDSRGNAQVIKAKVPLSEMFGYVTQLRSLSSG
                     RATSTMEFSHYAPAPNNIAEEVIAKSKGKVKVED"
     gene            complement(23331..24944)
                     /locus_tag="VEV83_08890"
     CDS             complement(23331..24944)
                     /locus_tag="VEV83_08890"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK45270.1"
                     /translation="MVSKKFKLILALLGLIQTASFGQATDANWVYDSSKISTKNMPHY
                     SEFTNYQTPYPAKPRSMWELGIGGGLSMIIGDIDPQPGIGGSLSARKALGHVVSVRAG
                     WAGSLNYGLDYRLRHVSFGEPDPWQHYEGPNGGGYVANYRTQMHQLSLDALFSLNTIN
                     HYRGNPKVDWYTLVGYSITYADVDVINGVKGFSTPVNFGAINYEGSRSDIKDDLKSAG
                     IDHGLFEFSNDKYKNAPVKNESRGSVGVHDGNELTRHAVNVGTGVAFKLSNKINLGIE
                     ERITIPFDDNWDGVWAGKSNDILTSTQFRVNINMGNPASHLEPLWWVNPFNYLYNEVA
                     TPRHMKLPPVVLPDADGDGVTDQFDMEPNTPAGCAVDSHGVSLDTDGDGVPDCRDKEK
                     LTPQNCFPVNADGVGACPPDTCCNRPLPQACNIGSLPSVQFKAGSASLSSTAKSLLDN
                     VASQLQANPDCKVKLVGYGASDKRSQQLSWDHVNAIKTYLTEQKGISESRVIFTYGQQ
                     GTGTTVDLVPTTEEGPNTVPAPHPNLRKG"
     gene            25140..26102
                     /locus_tag="VEV83_08895"
     CDS             25140..26102
                     /locus_tag="VEV83_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HYK45271.1"
                     /translation="MKKALQLIDQDLTKFEDYFSQAVKSNAPLLDRIMQYIVKRKGKQ
                     IRPMFVLLSAKLGGEITTTTYRAASLVELLHTATLVHDDVVDEARERRGFFSINALWK
                     NKIAVLVGDYLLSKGLLLSLNNHDYKVLQIISEAVKSMSEGELLQIERSRNLNLNEQI
                     YYDIIKGKTASLLSSACGAGACTTFSDDRYIEKMQQFGDKVGMAFQIKDDLFDYSNQN
                     IGKPTGIDIKEKKLTLPIIYTLTHCDKTLRKKIIYIIKNENRNKEKVQFVVDAVKETG
                     GIEYATTKMLAFRDEALKLLHEFNQSDARDALEDLVRFTTDRKY"
     gene            26102..27802
                     /gene="recJ"
                     /locus_tag="VEV83_08900"
     CDS             26102..27802
                     /gene="recJ"
                     /locus_tag="VEV83_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HYK45272.1"
                     /translation="MQKRWKILSGDDNKVTDLQNSLRISRTLCRVLVQRGVHNFERAH
                     DFFRPKLSHLHDPWLMKDMLKAVNRIQSAIKNNERILVFGDYDVDGTTAVACIYQFLQ
                     AIHPNVSFYIPHRYREGYGVSLAGIEFASANGYSLIISLDCGIKSTELVEHAKELGID
                     FIICDHHLPDEDLPNAVAVLDPKQKDCGYPYKELCGCGVAFKLMQALAEELKLPEESY
                     LKFIDLVAVAIAADIVPIDGENRVLAFFGLKKVNENPAVSLKALLQLAGMQRHIHING
                     LVFIVAPRINAAGRMDDARKAVQLFIEQDYNKALEYAGMLHNDNTERKEADTSITDEA
                     LLLIENDLISKDKKTTVVYKETWHKGVVGIVASRLIENYYRPTVVLTKSGDVIAGSAR
                     SVPGFNLYEAIHACREHLLGYGGHFAAAGLSMQEEKLPAFIDSFEKIVSETIHADLLV
                     PEIVIDAELNFRDITDPFLNIIDQMEPFGPGNLRPVFITRNVRDTGYSKILKDQHIRF
                     VLQQHDRIFTGIGFNMVNKFDLLKQNLPLNVVYTLDWNEWNGERLIQLKIIDLMLAQS
                     "
     gene            27864..>28252
                     /locus_tag="VEV83_08905"
     CDS             27864..>28252
                     /locus_tag="VEV83_08905"
                     /inference="COORDINATES: protein motif:HMM:NF024868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK45273.1"
                     /translation="MKIVHVTEAFEGGVIEFLRCLTHSTPELSYTIIYGRPQFFEQAQ
                     TSFPSNVQFIPWRHVNTQIRPAQDAKALTELIKILKAQQPFDIIHLHSAKAGILGRVA
                     ARTIGHKKVIYAPHGATFLRKDVSAFTR"
BASE COUNT         8025 a         6287 c         6205 g         7735 t
ORIGIN      
        1 aaaattgtgc taacttttgc gcatgaaagt gatcaggaaa catccgcttg cgatcaggtg
       61 gtttcactgg ataaactttc cggtgcttgg catcatgata tggagtggct tgctgatcta
      121 ctgggctaat ggcgtttata agatcgcggt tgctgataca acgatcatca aattttttcc
      181 agacggtttt tacaaagcac tgaaagtacc tttccacctt gcgaaaggaa tgagttttca
      241 tttcgctttc gcctggctgt ttgtggtgaa tggaatcgtt tatgtggctt acacgatttt
      301 ttctggtgag tggagatatc ttgttcctaa ccgacgatct ttcagagaag cgtggcaagt
      361 gttattgcac gacctgcaca ttcgaaaata tcaacctccg cagttgaaat ataacgcagc
      421 ccagcgcatt gcatataccc tgatcatttt aatggggatc ggaagtgtgt ggacaggcct
      481 cgccatttac aagccagttc aattttggtg gatggcctgg atgtgcggcg gctatgaggc
      541 cgcacgcgtt gagcatttca tactgactat cggctatgtt gtgttcttcc tgatccatat
      601 tgtacaggtc atcataactg gctggaataa tttccaggcg atgatatccg gccttgaagt
      661 tatcaaaccg gctaaaccaa ttcattccaa tgaagaggcc tgattttttt tcgaagagaa
      721 caaaggaaat acgcccttcc tcattcagaa gaagagccgt attctcattt gtcagttttg
      781 cggtgctttt gcttgtggca atttttttct ggaaatggct gaaccatcaa ccgactgaac
      841 aaggcgcgct gaaaccactc cgaaaaacac ttgaagcaaa cgaaaaaata ttgaagaccg
      901 cggttttcga caccgatcat ctcgctaaag aattcccgga gaaagatgcc gtaaaaaatg
      961 tgcgggtgaa cggtctcatc ggaatggaaa agacgattga tacaagcacg tggcgactta
     1021 atgtggtgag gtcaacggga gatacattaa agttgagttt ggacgatatc aaaaaattgc
     1081 ccaggaaaga tgtcatcttt gactttaagt gtatcgaagg ctggagccag gttactcatt
     1141 gggctggcgt gccactaaaa actttcatgc agtactatca tctcgatgcg caagaaaagc
     1201 tcagttatgt gggcctgcaa acagtggata aaaaatacta cgttggcatc gatatgccga
     1261 gcgccatgca gtctcaaact atcttatgct atgaaatgaa caataaggca ctgcctatga
     1321 accaggggtt tccactacgc cttatcattc ctgtaaaata cgggataaaa catttgaaac
     1381 aaattggcac catttacttc agcaatcaaa aacctccgga ttattgggct gaaagaggct
     1441 atgattatta tgcaggcttg tgatcacctg aacagcggaa caattacaaa acgtatcagc
     1501 ataattataa ctgcgacaag gaacatgatc agtgaaatgc gattcatgcc atgcatgtac
     1561 ttgatgtatt tattgtaagg tgcgtttgga tcccgcttct ttatgaacag atattcctgt
     1621 atttgtcgcc aaatgcccat gccatcacaa agctaaggga tggagtttac aagttcacgc
     1681 gttcagtgtt cacggtcggc cggatgcccc gaactttgag acaaggccaa cttgtaagcc
     1741 atgaaatatt gaaaaattga aagccctttt tctttatcat tacacaaaat tgcccgactg
     1801 actttttcgg aaaacatata caaacgcagc cctgtgtggc tgcagaacgt ttttgtttct
     1861 gcgtacggcc tgcaatggaa acaaagacga tttggtggaa tattcagcga ggaatataga
     1921 aaagccaagg agcgtgaaag ctttacagca caacaatgga gcgattacca ggattggcac
     1981 ttgcaaagga tcttacatca tgcatttgac cacgtaccat attataagaa agcgtttgaa
     2041 gagcaaaaca ttagcaggca atcactcgca aaactgtcag ctaatgccct ttcaaagctg
     2101 ccggtgctct tgaaggaaga tcttagaaga tttggaactt caactcttct ttcagataaa
     2161 aaagaaaagg gcggcttatt tttcccgagc agcggcagca ccggaacacc tactcaaatt
     2221 ttattttctc acgcaatgca tcagcgcgta ttcgcgctta tggaaagcag ggtacgcaac
     2281 tgggcaggcg taaacagctt catgccacga ggtatgatcg gcggaagaag agttgttccg
     2341 aatgcatacg cgttaccgcc atattaccgt tacaaccgtg ctgaaaaaca ggtctatttt
     2401 tctgcttatc acataagtaa gaataatgca caagattatt tagctgcgat taagaaatat
     2461 ggtgtacagt atatgactgg ttatgcgatg agcaacttct tgctggcgtc atttatggat
     2521 gaactggatc ttacagcacc gcatttgcga tgcgtgatca cttcgagcga aaagttaaca
     2581 ccaaaaatgc gggaagtatt tctaaaagtt tatgggtgta aaacatttga cggttggagc
     2641 ggccttgaaa attgcgggct ggtaagtgaa tgcgagcaag gaagcttgca cgttagtccg
     2701 gacgctggca taatagaact gctggatgat aaaatgcaac ccgtagatgc aggtagtccg
     2761 gggagggttt attgcaccgg gtttttgaat tacgatcaac ccctgataag gtatgatatt
     2821 ggcgacacga tggtggcctc aaatgaatca tgcgcatgcg gcaggcacat gccagtaata
     2881 agagagatca ttggtcgaaa cgaggacgtg gtgtatggga aagacggtcg tgccatggtg
     2941 cgttttcaca gtattttcaa tggacttcgt tcaataaaac aagcacaggt tatccaggaa
     3001 tccaccgaac taattagaat taaagttgtg cccgatggca acgttgcgcc acaagagctg
     3061 gtcataatga aggagcggat ccgtagccag ctaggagatg ttgacgtttt aatagaacaa
     3121 gtggagacaa tcgatcagac aaaaaacgga aaatttaagg cagtgatatc caggctttaa
     3181 cgtgcgttcc gtccgccacc gatccaaagt tagcagcaga acaattgact ttattgtctt
     3241 tatttgcgta agtattttat gccgaggaaa ttattacttc tctctcttgt gctgtttttg
     3301 atatttgcta aaggcagcag ccaatcatgc acggcacttg gccaaaatcc cggcacggca
     3361 tttccggttt gcggaacaag cacattccag caggatatag tgccgaattg tgggggccgt
     3421 aatgttccta cacccggatg taacaatgcc gcataccagg atctgaatcc gttctggtat
     3481 aaattcactt gctttcaaac aggcacactc ggatttgtca ttgttccaat tgaccagggt
     3541 gatgattatg attggcaatt attcgatatc accgggcata gtccggacga agtctacacc
     3601 gatccccggc ttgtagtcgc gtgcaactgg agtggcaact tcggaaacac cggagcatcg
     3661 tcagggggaa catcccttgt gaactgcgca ggtcccgcgt acccaacttt tagtagcatg
     3721 ccaacggtca taaagggcca tgattatatt ttgctgatca gtcattttac cacgtttaaa
     3781 ccaggcgacg cgggctatag cctttcattc ggtgatggca cttcggtgat aaccgatccg
     3841 gagccgccgg caatgctgag tgcgcgctcg agctgcgcag gagaaactat ttatgttaag
     3901 ctcaacaaag aaatgaagtg caatacgcta gcttcgaacg gtagcgactt ctcgatctcg
     3961 ccgccgctcg cgaacgtgaa gtccgctacg ggaattggtt gcagcagtgg ctttgacctg
     4021 gattctgttg ttatagatct tgataagcct ttacctccag gcaactactc cctggtggcg
     4081 aaaaacggtg gcgacggcaa taccttgctt gacaactgta gtaatggaat cccggatttg
     4141 gatagtatcc cgtttgtagt gtacgcgatt caacctacgc caatggacag cctcagcgct
     4201 gtcttatgcg cgcccgacgt gctgcaactt gtattcagaa atccgatgga ttgcaattct
     4261 attgcaaagg atgggagtga tttcgtagta aagggcacac agccagtggc ggttgctggt
     4321 gcttatggag tcaattgcac aaacggttta tcgagcatca ttgcggtgaa attgagcaag
     4381 cctatccaaa ctgcaggtgc gtttacgctc agcttgcaaa cgggaagcga tggcacgacc
     4441 ttgctcgacg aatgcgcgca ggaaacgcct cccgcaaccc tgtcttttac aaccgcagat
     4501 accgtgtcag caaatttcaa ttaccgggtg ggtctcggtt gtgtattcga cactttgttc
     4561 tacagctaca gtgacaaaaa ccaggtgaac cagtggaact ggacatttga tttaaacggt
     4621 acgagcacta ccgaaaactc atatttcctg tttaatgatt atggcagcaa acacatccag
     4681 cttgcgtgct cgaatggcgt ttgcaccgat accgctgcgg tagacatcgc actcgataat
     4741 gaactgcttg cacgattcaa ggtggcacct tcaccggaac tatgccctga agacggtgcg
     4801 atatttaccg actcaagcat cggaaaaata ttgagctggc attggatctt tggcgacggc
     4861 agcggcagca gtatggaaaa tccgccgtta aaaatgtacc cgccctcaga cacacgcgat
     4921 ggcaggatat atcctgtttc actcatcgtt aaaaatgacc ttggttgtta cgatacttcc
     4981 gtagcggata tgaaagttct atataactgt tatatcgctg taccgtcagg ctttacgcca
     5041 aatggcgacg ggctgaatga ttatctctac ccgttgaacg cttataaagc cgatggcctg
     5101 gaattcaaag tgtacaatcg ctggggacaa ctcgttttcc aaaccaggga ttggacaagg
     5161 aaatgggacg gaaaaattaa cggcgaacca caggcagcag gcacatatgt atggatgtta
     5221 agctataccc atcatgatac gggcaaacat tattctttaa aaggaattac agttttgata
     5281 agataggagc ttggtaagtt aataagttga caagttgaca atgtagtgcc gcgttaactt
     5341 gtcaaccttc aacttagcaa cttttagcgg tctatggaac aagtaatatt ggtcaacgaa
     5401 aaggatcagc agactggcgt aatggaaaag atggaggctc accggcaggg atcccttcat
     5461 cgtgccttca gcgtttttat tttaaacacg aagggtgaaa tgttgttaca gcaacgctca
     5521 atgaacaagt atcatagcgc aggcttgtgg acaaacgcgt gttgcagtca tccacgtccc
     5581 ggcgaattaa cagaagatgc agcagcgagg agactgaaag aggaactcgg atttgaaaca
     5641 ccactcagga agatctttga ttttacctac catgcatcgt tagagaacgg gctcaccgaa
     5701 catgaatttg atcatgtatt tttcgggaga tacagtggtg acatcaattt caacacacat
     5761 gaagtgcagg aaatttgttt ccgttcttta ggcgacatac agacatctct gcaaacacac
     5821 ccgtataaat ttacatcctg gtttcatata gcgtttccaa aactaagtga atggatgcag
     5881 tcgaattctg acttttaaca tgacagagct gaaggttaaa ccaacccgaa acattctttt
     5941 cttattttgc aaatcataac gacagtaatc tgcctgccat gaccagagat aaaattttag
     6001 tgatcggcgc cagtggtcaa attggcgttg aactcacctt ggcgcttcgc aatctatacg
     6061 gcaacgccaa tgttgtggca agcgatctgc gagaagaaaa tcagttgctc aaaggatcgg
     6121 gcccttatgt atcccttgac gtaatgaata aagagatgtt gcatgtacag gtgatccgcc
     6181 agaatgttac ccagatatac ttgctcgctg cgatactttc cgcaactggt gaaaaaaatc
     6241 cgggcctcgc gtggaatttg aacatgcagg gcttgctgaa tgtgctggat attgcacgcg
     6301 aagagaagct aaaaaaagta tactggccta gcagtatcgc ggtttttggc cccacatctc
     6361 cgaaaaaaaa ttgtccgcag cagacgatca ttgaacccat taccgtttat ggtatcagca
     6421 agtatgcggg agaattctgg tgtaattatt tcaacaaacg ttttggagtt gacgtgagga
     6481 gccttcggta tcctggcctg atcagttaca aatcggaacc gggcggtggt accaccgatt
     6541 atgccgtaga aatatttcac gatgcgcttg aagaaggacg ctatgaatgt tttctgaaac
     6601 aagatactta cctgccaatg atgtatatgc cggatgcaat acgtgctacg atagaattga
     6661 tggaagcgcc cgccgaaaaa atttctgtgc gcacttcata caatatctcg gccataagct
     6721 tctctcctgc ggaaattgcc gcatgcatca aagagcacgt cccgcaattt gaaataaatt
     6781 ataaaccaga ctaccgtcag gctattgcag acagttggcc acaaagcatt gatgacactg
     6841 tagcacgcaa ggattggaac tggcgaccag aatatgacct cgaaaagtta acggcagata
     6901 tgctgaagaa tttgcaaccg gcttaaaatt ttgagttcaa caaataatac gtttgaccgt
     6961 tgacagttaa gaattaaaat atgatagccc gcttcctgga atcagcaatt aaaacttttc
     7021 aaatgcgctt cttctctctt ttactactgt gctttctttg taaggtggcg ttctcccagg
     7081 acgacattcc ggattatcga agcaggaaag ataatttttc gaagatgatg gaaaaggacc
     7141 tgcgcgccga catttctcaa ttcagctttg caggcatcgg cgaaagcctc acgaaacata
     7201 aattggatca aattccggtt aaaaacgtta cgcaggattc tatcctgttt gcaaacgata
     7261 ccatgagcgt tcacattaca accggaaatt tcgatgcgag taaacacaag gttagctggg
     7321 ccgatgacaa gtatgcagtt aaattagaca atcatccttt ctggggaacc gagaacaaag
     7381 ttccgaagca tacgatcgca tctgtcgtcg ttatttttcg gagtgacacg cttttaattc
     7441 ccccagccgc ttacggcgat ctttatgagc cacatttttt ttatactgac gcaagcggtg
     7501 ctaccaagac ttattgtaac gtatacgtat cggctgacca ccggaaacag tatatctaca
     7561 tgctaaacgg cgagggtacc gggcggtatg aagtaacctg gataattcag gataagcatt
     7621 acttgaggag ggtggtggat tgggggtttt gatggttaat agtttattgg gttactggtt
     7681 tagttggtta ttggagatgg agtcaaaagc ggccttgatg gctgttactc atgccttgtc
     7741 agcattagaa ttttattcat aaccgtatct tgatgtttgc aggtgtaata gcaaatcatt
     7801 gaaagtggat ctggccaacg ataagggcag caactgaagg catttaccca gtgaccggtc
     7861 atcgtctgca aaataatcat ggcgtaaaaa catcgattta atttaaaaag cgccattgtg
     7921 ttgcaatggc gcttttattt gtatatcgtg attgtttatg accttccaat agagcctgcg
     7981 ggattatgaa tcaggctgga aaataccagg ctatttcgca tcgtctttca acgaaacaac
     8041 ctttgtaagt aattcggtat gcacttctgt tcgtaacgtg cccgcgctgg tgaaagcagc
     8101 aggatttgcc gtgttatatt tattccagtc agccttgtcc tgtttgtcca tcatagccgc
     8161 tttatcaaaa aagcggaaga tgatataatt ataaggagaa tttgcatccg ctggaaacat
     8221 taacctgccg aaactaaagg cagattcgaa accattcttg ataagatctt tatgaatagg
     8281 tccccaatcc tttgtttcaa gcgattcgta gtcgccttct ttgcctggag tcgccttcat
     8341 tgcagttgcc agcacataag taggagtgct tttgccatta aacccatcat tatacaacaa
     8401 ctcgattact gtagaacgga ccatatcgcg ggatgcggct gatgttgtaa gcaggctgtt
     8461 aacaccgtca tcacttaatc ccgggaaaat cttatgaaga tccacttttg cgtatccatt
     8521 aagaaaagca tccatgcttg gataaaccgt cccaaccacg tactggtatt ctgcattcat
     8581 gtcataaggc agcgttacgg cccaaacatt ccagtcgagt atagtgctgt ccttttgccg
     8641 ctgctggtgt atttttttcc agagggtttc cgtttgaatg tatgcagcgt cgttgccggg
     8701 ttttacatgc atatattcca aaaccaggta agctttgttt tgagcagttg cgctcagcat
     8761 catcgagctt aagatgatag caaatgaaaa gaaaattctt tttctcatgt ttaatttttt
     8821 tacaaatgaa taatagcgtg gtgtaggaac gattctattc ctgctttcag tagattattg
     8881 ccggatggtt tcgaggggaa tagtgagacg aaacagttta agcctcaaat tgacaattga
     8941 aaggtaagca taaccaggtg aagaacgcga atataatttg aggatgttat ttgatgatct
     9001 tttttatcct gtttgcattt tcaattagct ctgttagaaa tgcaacattc tctttttcca
     9061 ggctggcttt gaattttctt aattgtgaaa tatgttcatt caaaacgtcc aagacgtttt
     9121 cccggttttg catgaagatc ggtacccaca tggatgcggt actttttgcg aggcgtactg
     9181 tgctttcaaa accaccgccc gacaattcga agatggtttc ttcttccctt tctttttcta
     9241 atactgtgtt ggccaaagcg aacgatgtaa tgtgtgaaat gtgactgacg taagctgcgt
     9301 gcacgtcgtg gctttcagaa tccatatata cgatgtccat tccgagttgt ttgtaaatct
     9361 cttcaacgat tgtcaccgcc ttagggtctg acctttcttt atcacagata acacaactgc
     9421 ggccgataaa tgcgttcctc acagcagact cagggccact gtattccgtt ccccacatgg
     9481 gatgcgtaga tacaaatctt ttgcgcatag aatgatgttc aagcgctttg ctgagtacga
     9541 attttgtcga gcctgcgtct gcgacaattt gtttatcggt taccaggtcc atgatttcct
     9601 gcatgacagg gatagtgaca tcaaccggta tcgcaacata aatgaaatca ctttttaaaa
     9661 cagcctcgcg taatggcaat acttcgtcga tcaaacccag ctctaatgct tttttcccgc
     9721 ttgcttcggt gcgactgaca ccgatgatat gttttgcaag atccttttct tttaaagcca
     9781 acgcaaacga accgctgatc aagccaacgc ctacgacagt aaccgtggcc cccgccttaa
     9841 aaggtgcttt gagatcttct tctttatttt cgttctgcat aaacttgatt tttgatttgc
     9901 caaaatgcta aatcctaatt cctaattccc aattcctacc tcctacctct tacctcttac
     9961 ccctacctcc tactctcttc accgcttcct caattttctc ttccgttgcg cacaaactca
    10021 cacgcacata tttatctccc gcgcttccaa aaattccgcc aggcgtgatg aatacatctt
    10081 tattgtacaa tacttcatca ctcaattcat aagcgtcttt aaatcgctca ggcacctttg
    10141 cccaaagaaa catgcccgat tgatctcttg aagcatcaca ttccaaaaca tgcagcaatt
    10201 catatgcttt ttctcttctc cgtttgtaaa cgtcatttac tttttcgtac cacgatttat
    10261 caagactcag agccttcgcc gcggcaagtt gaacaggcag gaacattccg ctgtccatat
    10321 tacttttgaa acggagcacc tcatcaattc tttcctttgc tccacacaaa actcctaccc
    10381 gccaacctgc catgttgtgc gatttgctta atgagttcag ctcaagcact acatcctttg
    10441 ctccttcaac acttagcaaa ctcaacggct cctcgttgag gataaagctg taaggattat
    10501 catggcagat cagaatatca tgtttccttg caaaaacaat taattgctca aatgtgctct
    10561 tcaatgcttt ttgccccgta ggcatgtgcg gatagttcac aaaaagcccc ctaaccccct
    10621 gaaggggaaa tttcgagcct tcgcgaatta aattctccaa ttggttgaaa tccggttgat
    10681 atttattttc ttctttaaga tcatagtaca aaggagttgc tcctgagagt tttactgcgc
    10741 ttgcataagt tggataacca gggttgggca caagtacagc agatccgttt tcaaaatagg
    10801 tcatgcaaat atgcatgata ccttccttgc ttccgatcaa aggaagtatt tcactggctg
    10861 catctaattt cacgctgtac cattcttcat accaccgcgc aaacgcctcc cgcaggatcg
    10921 gcgagccttt gtaactctgg tacgcatgaa catttggttt tgcactttct tcctgtaatg
    10981 ttcttataac gtcaggatgc ggaggctgat cggggctacc tacgcccagg ttaataacat
    11041 tctttccttg tctgttgagt tcctcgatct ctcgcaattt cctggagaaa taatattcac
    11101 caacaccctg caaacgttcg gcgatatgta tcatacaaat ggatttgcta ttttatcttc
    11161 ccgtttttgt acacgccgta gatctttaaa tatttggtga tcggtttaat attgtcgatc
    11221 accgtttgaa attggttcat gctatcgaat tcaagatctg catgaaaact atacttaaag
    11281 tcgctgcccg gaattggaaa actttgcagc ttacttaaat tgatgccggc gtcggcgatc
    11341 ttagtgagca cttttgcgag gcttcccttc gaatggtctg tatgaaagtt cacggaagct
    11401 ttgtcaggat caacagcaat tttcgaatga ccgtcgcgct gaagaattaa aaaacgcgtg
    11461 taattatttt tcatcgtatg gatgttggga ctgatgatct tcagatcaaa caattcggcg
    11521 gcgagtgtgc tcgcaatagc ggcgatatgt ttgcttttat gttgatgaac atgctttgcg
    11581 cttaatgcgg tgtcttcggt ctcgacgagt ttccatgcat gtttgtcgag aaattcaaag
    11641 cactgttgta aagccattgg atgggaatgc acctcgcgaa tgtcttccag gcgcacgccc
    11701 ttatttacca tcaggttttg gtcgatctgc aaatagatct caccggtaat cgttaagctg
    11761 cttctctgta agaggttata attcgcaaga atgctgcccg ctatagagtt ttcgatcgcc
    11821 atgacgccac cgctgctgtc tgctgacgac gcaattttaa ctacttgctg aaaggtgtcg
    11881 cacgggatca cttccacaga aggtccaaaa aatttgatag cagccatttg gtgaaaactg
    11941 ccttcatagc cctggataga aactttgata ctcataacga aaaaatcccg gctgctggaa
    12001 ccgggattgt aaaagaatgt tttataataa caaacactac ccggtcttca ccttaaaata
    12061 aaaatagtaa ccgaagtatg tgtttgcttt tttcactggc gtaaaaataa aaggaagaac
    12121 caaggaaaaa aaattttttg cttggaacga acaaacggtc gttcgtgttt gcctcaataa
    12181 aaaaagccct tccgtggaaa cggaacggcc tctaacgatt gcttgccata tgaaaattct
    12241 tagctaaacg cccagccgca agctagccac ctcaaaccca cgttcacgtt tagaaaaatt
    12301 acttagtcgt atcagtatgt gtcgtatcca tcatgtgtga agacgtatca gtcatcatgc
    12361 tgctggtatc tgccggcatg ctgctcatag tatccgtacc cattgtgctt gtggaatcag
    12421 tggttgttga acttgttccg ctattgcagg cagcaaatgc gcctattgcc aaaacgatta
    12481 acagcttttt catttgtgtg ttttttttgt gatgtaattt aattggttaa tacaaaatcg
    12541 gtgctaaggt aacccggcga acaagggaat tttttaaaag attttgaaac ttgtttttgg
    12601 gttactttta ttgcaaacag gtattaaaaa gcacgaaggt gaagtctgac acgaacgaac
    12661 aacttttact caaaggactg gcacacaacg attcgaaggc ggcagaaacc atttacaagg
    12721 ataacttcaa catggtactt gcttttgttc ttaacaacaa cggatcgtat gaagaagcaa
    12781 aggatatttt tcaggagacg atgatcactc tttatgaaaa agctaaaacg gattcatttg
    12841 ttctcacctg ccaaattaaa acctatgttt actccgttag cagaagattg tggcttaagc
    12901 gtttgcagca gataggaaaa actgccccgg gtattgagaa ttatgaagaa acggtcattg
    12961 tagatgatga cctggacctg caggaaagaa aaaatgagga atttcgtatc atggaccggg
    13021 cattgaatag tctgggcgag ccctgtaaaa cgctgttgga agcgtattat attcaaaaga
    13081 aaggcatgtc ggaaatagca acgttgttcg gttatacaaa tgcagacaat gcaaagaatc
    13141 aaaaatataa gtgcctgatg cggctgaaaa aattattttt tacccagtat aatatcggag
    13201 agtgatggaa gatattcttt tgttgaattc aattgaacgt tatctagaag gacaaatgct
    13261 gcccgatgag cgttcttttt ttgaagaact gcgccgcaac cagccagaga tcgaccagat
    13321 ggtagtagag cacaaactct ttcttcacca aatgcatgcg tacgccgaca aaagaaattt
    13381 caaagaacag cttcacaata tccatacaac actggcagaa accggcgaag taaaaagcag
    13441 cgatcatgct tacggcttca caggaaaagt catcgaattg tggcaccgct acaagagggt
    13501 cactgccatc gccgcctcta tagcctgcat tacagcaata ttcatcagcg ccctggccat
    13561 gtatttttca cctgcagtgg atccaagtca actggaacgc ctcggaaggg atatagaaca
    13621 gatcaaaaag aaccagcagt ttaccaacag ggcaataaac gatgtgatca cttcttccaa
    13681 agtgccaaaa ggcgcaatgc ttaaaagcgg aggtactgct tttttgatcg atgggaaagg
    13741 ctacctggtg actaatgcgc atgtgctaac cggcagcggc gctatcgtcg tagataacca
    13801 gggtaacgaa tacaactctc gtattctctc ggtagatcgt aaacttgacc ttgcggtgtt
    13861 gaagatcgat gatcatgact ttaaggccat aaaagttttg ccttatgccg tgcgtcgctc
    13921 gcaacctgac ctcggtgaag aattatttac gcttggttat ccgcgcgatg agatcgttta
    13981 caatatgggt tacctcagcg ctaagaccgg ataccagggc gatacagcaa gctgccaatt
    14041 gtctttgacg gcgaaccccg ggaactcggg cgcgccagtg ttcaacagga atggcgagat
    14101 cgtcgggatt atttctacga aacaaacaca ggctgaagga gtagtgtttg cgctcaagtc
    14161 aaacaatata tttaaaatga tcgacagcct gaaaacaatt gatacgacgt tcaaaaatat
    14221 tgttcttcca ttaaactctt cattaaagaa aatggacagg gtgagccagg taaaaaaagc
    14281 cgagaactgc gttttcctgg tgaaggccta caactaaact aaataagggt aagcattttt
    14341 ctctgaatcc cgcatatctt tgcgggattc gtatttaaac caactaactg attcctcaag
    14401 gatctgtcac ctccaaagta aaccaaaatg actcaacctc tcaaatgcct ggttgtagtt
    14461 tttgccattg gtctaaccag ctgcgcatct atcgtaagca aaagcaattg gccattctcc
    14521 atagacagca gtccaagtgc tgctgatgtt tccataagaa ataaaagagg agtagaagtt
    14581 tttcatggca gaacgcctgc tgccatggcg ctcaagtctg gcgccggctt tttcgcaaag
    14641 gagtcgtatg ttgttacctt gagcatggac ggatacgaaa cgaaaaaggt taatgtcgag
    14701 tgcaaattga acggctggta cttcggtaat attttgatcg gcggaataat cggcttgctc
    14761 atcattgatc cggcaacagg ggccatgtac cgcctggaca gtaaagggat gcatatggac
    14821 cttgaagctt cccaaaaatc tacacttaag atcatagatc tgaaagatgt gcctgacagc
    14881 ctaaagacaa gtctcgtaaa attgccctag ccggaattct tagtggaaat attcgaaaac
    14941 atttttgccg aaggcgcact acgcccaaag attgccagga tattctcctt tttcaaccag
    15001 ccgttttatt tcccgttgca ctatcggcgc atcttcttta tatgttacgc caaaccattt
    15061 tgatgacgtt gggatcactt cgacttttcc ttttccccgt ttaatgaaat cgtcagtcac
    15121 cgttggaatg agaaattcag ctttcagttc tttcgaatga tcacgtaaga attcttgaaa
    15181 ctccacttca cacaggtcga tgaagcttgg atggtagcag aaaaaattca tacttgcttt
    15241 tgtgtcttcc ggcagttcta ccaggtgacc gtcttcatca tcaacgatct tatctccttt
    15301 ccgcgagatc ttcaaacgtt cgacgatccc cgtcatctcg ttcttttcat tcgttgagat
    15361 cacgccacgg ctcaccgttc catgctcgct caatgtattg gcaagttgat agccgatcac
    15421 tgcgtacgtt ttttcatcgc accgcgtctt taaaaactca aacgcttttt tgtacgaatc
    15481 tttcccataa aaatcatctg cgttgatcac cgcaaatggg gcatcaacag tgcccttgca
    15541 gcacaagacc gcatgagccg ttccccacgg tttcactctt tccgggttca tttcccagcc
    15601 ttcagtgaaa ctgctgaatt tttgaaagac ataatcggtt tgtatgcgcc cctttaattt
    15661 tggttcgagt atgcctttga aaacatcggc aaaatcttcg cgaattatga acacaacgcg
    15721 ctcaaatccg gcctcgatag cgtcataaat agaatactcc atgatagtct ctcctgaagg
    15781 tccaaatgat tgcgtttgct tcatgctgcc gtaacggctt gcaatacctg ccgcgagtat
    15841 tactattgtt gattgcatag gcttttctta gatcgctgcg aaactaatta aattttcatg
    15901 ctaatatcat tccacataat gtgtgaacgg atcaatgaaa caatcagaag ccacttatat
    15961 ctttgctgca attgaacgag ttgtttgcat gaatatagaa tctaaccgcg atcatgattg
    16021 gatgaagctg cttgtgagcg atgtgaggaa ccggtttgag aagatcaaac tgggtggtgg
    16081 aaaaaaagcg atagcaaagc agagggaaaa aaacaaatta actgcgcgcg aacgcctaag
    16141 tcatttactt gacaaggcag agccttttat cgaaattgct cgattcgccg gatttgaaat
    16201 gtatgaagaa caaggcggct gtccggcggg tggcacagtg gcaggcattg gttacataag
    16261 cggaaggcaa tgcgtggtag ttgcaaacga tcaaaccgtt aaggctggcg cgtggtttcc
    16321 cattaccggc aagaagaatt tgcgcatgca ggagatcgct atggaaaaca ggctgccgat
    16381 catttacctt gttgacagcg ccggggtttt ccttcctatg caagatgaga tattcccgga
    16441 caaggagcat tttggaagga tatttcgcaa caacgcaaag atgagttcca tgggcattac
    16501 acagatcgct gctgtactcg gaccgtgtgt cgccggcggc gcgtacctgc caataatgag
    16561 cgacgaaact ttgatggtgg agggcaatgg aagtattttt ctcgcaggtc cttatttagt
    16621 aaaagcagcg atcggcgaaa acattgacgt ggaaacgttg ggtggagcgg aaacacataa
    16681 cgcgatcagc ggtattgctg actataaatt tgataccgaa caagaatgcc ttgacaaaat
    16741 aaaaaagata attggcaagt taggcgctcc ttcgtcggca ggtttcaacc gcattccagc
    16801 agttgctccg gcaaaaaaca ttgattcgat ctacagcata atgcatgcga gtaatgcgaa
    16861 gccctatgat gtggttcaaa ttattgagtg cattgttgat gccaacacct ttgagcagtt
    16921 taaagaagaa tatggccaga cgatcgtttg cggctatgcg cgtgttgacg ggtgggcggt
    16981 gggaatcgtc gcgaatcaac gattgatcgt aagaacaaaa aagggcgaga tgcaattggg
    17041 cggcgtaata tataatgaca gtgccgataa agcagcgcgc tttattttga actgcaatca
    17101 aaagaaaatt ccgcttgttt tcctgcagga tgttacaggc tttatggtcg gcagtcgcag
    17161 tgagcacgca ggcatcataa aagatggtgc aaaaatggtg aatgccgtgg cgaattccgt
    17221 cgtaccaaaa attaccatca ttaccggtaa cagttatggc gccggcaatt atgcgatgtg
    17281 tggcaaagcg tatgatccgc gtttcatata cgcgtggcca agcgcaagaa ttgctgtaat
    17341 gggaggcgac caggccgcga aaactttact gcagatccac gtttccggca aagaggtaag
    17401 cgaagccgag caaaacgaat tactggataa gatcaaatcg cgttatgata aacaaaccag
    17461 tccttattac gctgcagcgc gtttgtgggt tgatgacata attgatccgg cagatacgag
    17521 agaagtgatc agcgaaggga tcagagcggc gaataataat cctgaaataa acgaattaaa
    17581 agtcggcgtg ttccaggtgt aggatcattg agcatttgat ctgccatcaa ctttcagaaa
    17641 gttgcatttt ccggagttgc tcatcccttc ttattttttc ccaatacctt ttcgcgacga
    17701 acagcattcc aaaactctca ccgtcgtctt tattcaaatg ccggtgatgc attttgtgtg
    17761 cccagcgaat tgcttttacg taacgattat tgctccttgt gaaaagcctg aaccgttgat
    17821 gaatgatcac gtcatgcact aaaaaatatg cgaagccgta taatgcaata cccgaaccga
    17881 tgctaactac ccaccacgct tcctgcatgc tgcccaacat gatacacagc cagcttggaa
    17941 tcgcgaagat gataaagaat gcgtcatttt tttcgaacaa atgatcacgc ttttgatggt
    18001 gatcctcgtg cagccaccag agaaacccat gcattacata cttatgcgta agccacgtga
    18061 ttccttccat ggtaaaaaag gaaacgatag caataagaag atacaaaagc caagtcataa
    18121 aaatgtcctc aatacaaaaa agaaaagcaa ttgaattatc agcaaatgta ccgcgaaaat
    18181 attgtgccgg ttgaacttta gcgttctaaa caaccaaagt aacaatgcac tgatcataag
    18241 ccagcagata taattatata caggcactga ctcattgttc caccgccagt acccaagttt
    18301 aactgcaacc ggctcgatta gccagtcaaa gaaaactgca agcagcacgg cgtctgtaat
    18361 aaacgatatc aattgcatcc gggctgtgac agtaaaaccc ttttccgcaa tcgttcgcag
    18421 gatacggtcc tcataaaatt gcgtcgcagc cccagtgcaa taaataataa tgaaccagtt
    18481 gatgccaatt acgagcggca caccgaaaag ttttgggccc aatgcttccc cataattata
    18541 gttgccgaac agtgcagcgg tattcacgcc gataatctca acacaaaagc cggaaataaa
    18601 cgttatgccg aagaataaaa aaaattgcag atttttttgt tgctgcgtaa tgaaaagcaa
    18661 tgctgccatg agtgaaagat tgagtgctgt atgctggacg aaccaatcct tctgctgagt
    18721 gtacaagatg cctatgaggc cgcttacgtg aaataacagt gcaatgaaaa gagccgtgtt
    18781 attaagaagt gccgtttttt tagtcattct gtttccattt acgcacgtcg gaagcgatga
    18841 tgcctgcagt gatcttcgca cttttcaggc agagcggaat tcctccgccc ggatgtacgg
    18901 tcccgccaac aaaataaagt cgtttcatat ctttggaaaa attgggatga cgaagaaatg
    18961 ctgctgcggc cgagtttgag ctcgagccat acaatgctcc catatatgct cccgtttgtt
    19021 cttcgattag ttttggcgag agaacccttt ctgtttcaat aagcgattca atatctgtct
    19081 tcaacatacg gcttaactta gcgagtatat ttgccctgca tgtagcaatc agttcctggt
    19141 cttcagtggc ggttccggcc ggaacgttta tcatcacaaa ccagttttcc tttccaacag
    19201 gcgcatgtat gcccggctca catttggaag tgatgttcac gtaaacagtc ggatcagcac
    19261 ataaattttt tttgcgaaag atactgtcaa actccgcttc atagtcctca ctaaaaaaaa
    19321 tgttatgcag gtccagctgc gaaaactcct ttgcaatgcc ccaataaaag actacggcgc
    19381 tattgctcct ctcgcgctta aggatgcgtt tcgcggtgtg ttcgtcagca agcaggcgtg
    19441 aataggtaaa gtatgcatcg acattactca cgatactgtc tgcaaaaaag gtttcaccgt
    19501 ttgcgacaac accaacggcc ttattctctt ttttgacgat gtgttgtatc gctgaattga
    19561 atcgaaaagt gacacctttt ttttctgcaa gtttagcgag cgcatttgcg atagatatca
    19621 tacccccttc agggtaaaag actccttcat tatgttcggc attgggcaac aattgaaaca
    19681 tcccggctgc cgtatacggg ttgctgccat tgtaggttgc ataccggtcg aataactgca
    19741 ccgtattcga atgttgaaac tttcgcgcgt ttacgtcatg caacgttgaa aaaatatacg
    19801 acggcctggt tgaaatcaac gctttaaaaa cggcggggct aataaacgta gatattttgt
    19861 gcaaagaatg gttgacaaat acatctccta cgtgttcata aatatttttc gactcgttta
    19921 agtaagacaa cactgcaccc gccggctcgc cagttttgtc ttccagttct ttcgagaatt
    19981 ttactttgtc tgtatatgca ttgataactg taccgtcttc ataaaaatat ttacaggcta
    20041 tttcaaccgg tgtgtagtgc aggaattcat gaatattttc gtccgcagcc tgaaacaact
    20101 cttccaaatc ctccggctgt acaaataagc tcggacctcc atcgaagcga taacctcctg
    20161 cttcaacaag gtttaatttc ccgccaggat aattattctt ttcaaaaatc gtaacatcca
    20221 tgttttgcat cgcgagccga actgcggttg ccatgccggc aacaccggcg cctattacgt
    20281 atgcttttaa gcgtcccatc aggcaggatc aattgcaaaa atttctttta tggtgtctat
    20341 tattgtcatg agacgtccaa agcaacatcc tcgccattat tgtatgacga agaaagctgt
    20401 tgaggcaacg gcgaaagtag cgcagagata aaaaatgcat cggctttatt tcataaatcg
    20461 catttttctt aagaaagcaa cgaatgtagc agcgcagttt ggtatccatc ttgcggcgat
    20521 ctaaataaat ttccatggca aaaaaatcag ctagtaaaaa agcggctgca aaaaaatcag
    20581 cgccaaagaa gtggtctaaa aaagtgacca acacaagcaa cgcgcttgac ctcagatcaa
    20641 aagtctttac gaaagatgat ccgcacgcga tagcgctttc attaaaacga tcagctgaaa
    20701 gaagcaaaag aaaaaaagga acgccttacc aatccgccat gtcgatgctc aatttttata
    20761 ttaatcgggc tggaaaaaac ttgcccgaga aacaacaaca aacattggaa aaagcgaaag
    20821 acgagcttag agcggttttc gatcggcagc aaaaatgaga ccgggttcta ttcatgtatg
    20881 ctcgggcagg tctaataaaa aacccgctcg aaccgaacgg gtctgaaaac tttacgatct
    20941 taaaaagtct cctttaacgc agactagcgg ttaatcttca accttcactt tgcccttgct
    21001 ttttgcgatc acttcttctg caatattatt cggagccggc gcataatgcg agaattccat
    21061 ggtagatgtt gcgcgtccgg acgacaagga ccgaagttgc gttacataac caaacatttc
    21121 gctcaacggc actttcgctt ttatgacctg tgcattcccc ctgctatcca tgccctccaa
    21181 cataccacga cgcctgttca aatcaccggt aacatcaccc atatactggt ccggcgtaac
    21241 aacttcgacc ttcattatag gctcgagtaa aacaggcttt gctttttttc cggcctctct
    21301 gaagcctgat tttgcgcaaa gttcaaagct cattgaatcg gagtccaccg cgtggaaact
    21361 tccatcaaat acacgcacct tcatgctttc cattgggtaa gcggcaagaa caccggttcc
    21421 cattgagctt tcaaatccct tcgaaatggc cggtacaaat tcccgtggaa tagaaccacc
    21481 aaaaagatca tttacgaact gaaaagattt tccgggattt tcctgcaccc attccttgtc
    21541 tgcaggtcct atttcgaatt gtatatccgc gaacttaccg cggccacccg tctgtttctt
    21601 cagcacttcg cgatgttcaa tcgctttagt gaaagcttct ttatacgcta cctgtggatt
    21661 tccctggttt atttcaacct taaattcacg gcgcatgcgg tcaacaataa tttcaagatg
    21721 cagttctccc atcccggaaa gaatggtctg gcctgtatct tcatctgttt tcacccttaa
    21781 agtgggatct tcttcaacga gtttggctat tgccattccc atcttatcta catccgcctg
    21841 tgttctcggt tctatcgcca cagaaataac aggctcaggt atgaacatgt tttccaagac
    21901 tatcggatga tcctcatcgc ataaagtatc ccctgttttt atttctttaa atccgaccgc
    21961 ggcagcgata tcgcccgctt caatagcatc catcgggttt tgcttgttgg caaacatctt
    22021 catgatgcgg ctgatacgtt cgtttttgcc gctgcgcatg ttcttgacat aggagccagc
    22081 ctcaagacgg ccgctataac aacggaaaaa agccagacgg ccaacgaaag gatcggtcat
    22141 aatcttaaaa gccaaagcag caaaaggttc tttcggatct gcctttcggc tgacttcctt
    22201 gcctgtgtcc gggtctgtgc caaccgtagg tggcaggtcg gcgggagaag gaaggtaacg
    22261 gcatacggca tctagccccg tctgcacacc tttatttttg aatgaagagc cacacagcat
    22321 tggtacgata gtaagatcaa tcgttgcctt gcgaatagcc tcgtgcactt catcctcagt
    22381 aatggtatcc gggttgtcga agaatttttc cattagcttg tcatcatatt cagcaaccgc
    22441 ctcaattaat tgagcccgcc agtattcggc ctcctccttc atgtcctcgg gaataggtac
    22501 ttctttgtaa gtcatccctt cagttgcatc atcccaaata atacccttca tctgaattaa
    22561 gtccactacg cccttgaaat tttcttcaga accgagcggt aattgcaagg gcacactttt
    22621 cgctcccagc atttccttaa cctgtgcaac cacgttcagg aaatcggcgc ccgcgcggtc
    22681 catcttattt acgaaaccta ttctcggaac tccataacgg tttgcctggc gccatacggt
    22741 ttcactttgc ggttcaacgc cgtcgacagc agaaaataaa gcgatcagtc cgtcgagtac
    22801 acgcattgag cgttcaactt ccacagtaaa atccacgtgg cccggtgtat cgataatgtt
    22861 gaagtaatat tttttagtat ccgccgttgg cttgccctgc tgtgtaggaa aattccattg
    22921 gcagctaacc gcagcagacg ttatagtaat gcctctctct ttttcttgtt ccatccagtc
    22981 ggtggtggct gcgccttcat gtacttcgcc tatacgatgg atcatgccgg tatagcgaag
    23041 aattcgttcc gttgtcgtgg ttttaccggc gtcaatatgc gcggcaattc caaaatttct
    23101 ttgtaatcgt aaatcagcca tggtaaatta tgattagtgt ttgctttaaa ttgaaaatgt
    23161 ctccatcggt catcgctgtt caaacgtccg ctaccacaat aaagccttaa aatttttaga
    23221 gcggcgaagg tacaattttt tgccggttcg ggaggtttga aaggttaatt aattatcata
    23281 aaaaaggcca ccggaattcc agtggcctta aaatttattt cagttatgat ttatcctttt
    23341 ctcaggttcg gatgcggagc cggaactgtg ttaggtcctt cttccgttgt tggaaccagg
    23401 tctacagttg ttccagtacc ctgttgacca taagtgaaga tcacgcgcga ctcagaaata
    23461 cctttttgtt cagtcaggta agtcttgata gcatttacat gatcccagct cagctgttga
    23521 gatctcttgt cagaagcacc atagcctacc agtttcactt tacaatcagg attagcctgc
    23581 aattgcgatg caacgttgtc aagcagtgat tttgctgtgc tgctcaatga tgcgctacct
    23641 gctttgaatt gtacgcttgg caagcttccg atgttacatg cctgtggcag tggtctgttg
    23701 cagcaagtgt ccggaggaca tgcgccaaca ccgtcagcat taacagggaa acagttttga
    23761 ggagtaagtt tttccttatc acggcaatca ggaacgccgt cgccgtctgt atcgagactt
    23821 acaccgtggc tatcaactgc gcaaccggca ggagtgttcg gctccatgtc gaattggtca
    23881 gtaactccgt cgccatcagc atccggtaac acaactggag gcagtttcat gtgacgagga
    23941 gttgcaactt cgttgtacaa atagttgaat gggttaaccc accacaaagg ttcgaggtga
    24001 cttgcaggat tacccatatt gatattaacc ctgaattgcg ttgaggtcaa aatatcattc
    24061 gatttaccag cccaaacacc gtcccagtta tcatcgaaag gaatggttat tctttcttca
    24121 ataccgaggt tgatcttatt gctcaattta aaagcaacac cggtaccaac gttaaccgca
    24181 tgccttgtca attcattacc gtcgtgtacg ccgacactcc ccctgctttc attttttacg
    24241 ggagcatttt tgtatttgtc attgctgaat tcaaacaagc catgatcgat tccggcagat
    24301 ttcaaatcat ctttaatgtc ggaacgcgag ccctcataat taatggctcc aaaattaaca
    24361 ggcgttgaaa agcctttaac cccgttgata acgtcaacgt cggcatatgt tatactgtaa
    24421 cctaccaacg tataccaatc aacttttgga ttacccctgt aatgattgat cgtattcagg
    24481 ctaaacaagg cgtctaaaga aagctgatgc atttgcgtac gatagtttgc aacatacccg
    24541 ccgccgtttg gaccttcata atgttgccat ggatcaggtt cgccgaaact aacatgtctt
    24601 aaacgataat ccagaccgta gttgagagaa ccagcccaac ccgctctaac agatacaaca
    24661 tgacccaacg ctttccttgc agaaaggcta ccgccaatac ctggctgagg atcaatatcg
    24721 ccaatgatca ttgaaaggcc accacctatg ccaagctccc acatactgcg aggctttgcg
    24781 ggatatggtg tttgataatt tgtgaactcg ctgtaatgcg gcatattctt cgtggagatc
    24841 ttagaagaat catacaccca gttagcatca gtggcttgac caaacgatgc tgtttgtatt
    24901 agacccaaga gggctaagat caatttgaac ttcttgctta ccataggtaa atttttagtt
    24961 gtttaatgtt tcccttaatg taatatgttt acaaatttat atatagatta tgaaatacca
    25021 aatttttaca atttattttc ttctgataaa acagttctta tgacaagagt tatattcgca
    25081 ttgctgctta gattgcctaa ttagttttca acataacttg cagacccaga taatatttaa
    25141 tgaagaaagc cttacaatta atagaccaag atttaacaaa atttgaggat tatttcagcc
    25201 aggcagtaaa aagcaacgca cccttactcg acaggatcat gcaatacata gtaaaaagaa
    25261 aaggcaaaca gatacgcccg atgttcgtgc tgttaagcgc aaaactgggt ggtgaaataa
    25321 caacaacaac ttatcgagcg gcttcccttg tagaattgtt gcatactgcc acgcttgttc
    25381 atgatgacgt tgttgatgaa gcgagagaga gaagaggctt tttttctatc aacgctttat
    25441 ggaaaaataa gatcgccgtc ctcgtcggcg attacctcct atcgaaagga ctattgctgt
    25501 cgctcaacaa ccacgattac aaagttttgc agatcatttc agaagcggtg aaatcgatga
    25561 gtgaaggtga gctacttcaa attgagcgct cacgaaatct taatttaaat gaacagattt
    25621 attatgatat tattaaagga aaaacagctt cacttttgtc ctccgcgtgt ggcgccggag
    25681 catgcacgac gttcagcgac gacagatata tagaaaaaat gcaacaattt ggtgataagg
    25741 ttgggatggc atttcaaatt aaagacgatc tgttcgacta cagcaatcaa aacattggta
    25801 aacccacggg catcgatatc aaagaaaaaa aattgacgct gccgattatt tatacgttga
    25861 cgcattgcga taaaaccctg agaaaaaaaa ttatttacat tatcaagaac gaaaacagga
    25921 ataaggaaaa ggtgcagttc gttgttgatg cggtgaaaga gaccggtggc attgaatacg
    25981 caaccaccaa aatgttagcg tttagggacg aagcgttaaa actgttacat gaattcaacc
    26041 aatcggatgc acgggatgct cttgaagatc ttgttcgttt tacgacagac cgaaaatact
    26101 gatgcaaaaa agatggaaaa tattatctgg tgatgataac aaggtgacag acctccaaaa
    26161 cagtctgcgc ataagcagaa cgctttgccg ggttctagtg caaagaggcg ttcacaattt
    26221 tgagcgcgca catgattttt tcaggccaaa actctcacac ctgcacgacc cgtggctgat
    26281 gaaggacatg ctcaaagccg tgaaccgcat tcaatcagct ataaaaaaca atgaacgcat
    26341 tctcgttttt ggtgattacg acgttgatgg cacaactgcg gttgcgtgta tttaccagtt
    26401 tctccaagct atccatccga atgtgtcgtt ttacattccg caccggtaca gggaaggcta
    26461 tggtgtttcc cttgcaggaa ttgaattcgc atccgcaaac ggttattccc tgatcatatc
    26521 cttagactgc ggaataaaat caacggaact cgttgagcac gcaaaagaac tcggcatcga
    26581 ttttattatt tgtgaccatc acctgccgga tgaagatctg ccaaacgctg ttgccgtatt
    26641 ggatccaaaa caaaaagatt gcggttatcc ttacaaagaa ttatgcggct gcggcgttgc
    26701 tttcaaattg atgcaggcac ttgcagaaga gctgaaactc ccggaagaat cttacctgaa
    26761 atttatcgat ctcgttgccg ttgcaattgc tgccgatata gtgcctatcg atggcgaaaa
    26821 ccgtgtgctc gcctttttcg gcctgaaaaa agtaaatgag aatccggcag taagtttaaa
    26881 ggcattgttg caattagcag gcatgcaacg gcacatacac attaacgggt tggtatttat
    26941 cgtggcgccg cgcatcaatg ccgcaggcag gatggatgac gctcgcaaag cggtgcaatt
    27001 gttcattgaa caagactata ataaagccct tgaatatgcg ggaatgctgc ataacgataa
    27061 tacggagcga aaagaagccg ataccagcat aaccgatgaa gcgttactcc tgatagaaaa
    27121 cgacctgatc tcaaaagata agaaaacgac cgttgtttac aaagagacct ggcacaaggg
    27181 cgttgtgggc atcgttgcat cacgactcat cgaaaattat tatcgcccga cggtagtgtt
    27241 gaccaaaagt ggtgacgtga tcgcaggcag cgcacgaagc gtccccggtt ttaatttata
    27301 cgaagctata catgcatgcc gtgaacattt gctcggctat ggtggacatt ttgctgcagc
    27361 cgggctaagt atgcaggaag aaaaattgcc ggcattcatc gacagctttg aaaagatagt
    27421 atctgaaact attcacgcag atcttttggt gccggagatc gtgatcgatg ctgaactgaa
    27481 ttttagagac atcaccgacc cgttcctgaa tatcattgat caaatggaac cgttcggccc
    27541 ggggaacctg cggcctgttt ttatcacgag gaatgtgcgc gacacgggtt attccaaaat
    27601 cttaaaagac cagcacatca gatttgttct gcaacaacac gacagaattt ttacagggat
    27661 tggcttcaac atggtgaata aatttgatct cctgaaacaa aatcttccac tcaatgttgt
    27721 ttacacactc gattggaatg agtggaatgg tgagagacta attcaactta agataattga
    27781 tcttatgctt gcacaatcgt aacggccgcc cagctatcct cgtaccaaaa ttaaaacctt
    27841 gaactttttt tacttttgct tcgatgaaga tcgttcacgt aacggaagcg tttgaaggtg
    27901 gagtgattga atttctacga tgccttaccc acagcactcc tgagctttcc tatacaataa
    27961 tctatggccg tcctcaattc tttgaacaag cgcaaacatc ttttccatcc aatgtgcagt
    28021 tcattccatg gagacatgtg aacacgcaaa ttcgccctgc gcaggacgca aaggctttga
    28081 ctgagcttat caagatcctg aaagcacaac aacccttcga cattattcac ctgcactcag
    28141 caaaggcagg tattctcgga agagtcgccg caagaacgat cgggcacaag aaggtgatct
    28201 atgcgccgca tggagctact tttctaagga aagatgtatc agccttcacc cg
//
LOCUS       DASQJI010000318         3368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1109885,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000318 DASQJI010000000
VERSION     DASQJI010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109885"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VEV83_08910"
     CDS             complement(<1..407)
                     /locus_tag="VEV83_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45274.1"
                     /translation="MNHKKNFNRRDFINTSAAASVAFTILPRHVLGGRGYVAPSDKLR
                     LAYIGCGTQGLREMCELITNPQLQIVTVCDCNKMSTNYLDWSPNEIRDSIREVTGDSN
                     WGANLNGIPGGRDVGKELVEKYYSKTGTPMTCPA"
     gene            complement(686..3244)
                     /locus_tag="VEV83_08915"
     CDS             complement(686..3244)
                     /locus_tag="VEV83_08915"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HYK45275.1"
                     /translation="MSQSSSAALQEFKNHVGLKFQLYNSLFTSLPFHRIEKTGVLLSL
                     FLLQCEEGFNKQKSPAQIIEHFLKQNTTYQTEDERIDLLFRFVQYAERQVVLFDALED
                     AAFGEVNDLNGPGTLKQLCSQISQMRMDDAFLKKLNDFSVRLVLTAHPTQFYRGEVLG
                     IINDLARALRNDDTETVNTYLQQLGRTPFLKKEKPTPYDEAVSLLWFLENVFYDAAGN
                     IMSTLQHEFQQANEVKHPLVQMGFWPGADRDGNPFVTTNITLKVADTLRAGILRCYHK
                     DVKWLKRRLTFKDVQELITTLEKRLYDNLYSETAEKITQNEIENILQQIITLLQSNNN
                     LFVEDVYNLLFKTTIFGLYFASLDIRQESSVHAKFFDYLAGQNVLPANYASLDDDKKI
                     ANLLQLSATEISFGDNELFADTLGSAQAVKTIQQQNGVQACYRYVISQCNSALNVIEV
                     YGLFLLAGWKKEALSVDIVPLFETIDDLAHAASIMKKLYTNKIYRQHLAQRQNTQTIM
                     LGFSDGTKDGGYLMANWSIYKAKEELTRVSKSYGIDVIFFDGRGGPPARGGGKTHKFY
                     ASMGSDISNKEIQLTVQGQTVSSNFGTISAAQFNIEQLINAGISNALFSAKENTLGRS
                     EERLLRQLAEDSYNAYLQLKNHPAFVDYLAEISPLRYYAETNIGSRPAKRGKASGLSL
                     KDLRAIPFVGAFSQLKQNVTGYYGVGTALKKAEAAGNWKYVQRLYRNSLFFKTLTDNC
                     EMAMMKCFFPLTQYLSDHPRYGKLWKLMHDEFRLTVNYVEKLSSNQSLMSDYPVENSS
                     IQMRERIVVPLVTIQQYALMQVREVKDAESIKEKYEKLAMRCSFGIINAGRNSA"
BASE COUNT          890 a          734 c          761 g          983 t
ORIGIN      
        1 gccgggcacg tcatcggggt gccggtctta ctgtaatatt tttcaaccaa ttcctttcct
       61 acatcacggc cacctggaat cccattcaag ttggcacccc agttcgaatc accagttacc
      121 tccctgatgc tatcgcggat ctcatttggt gaccagtcga gataatttgt gctcatctta
      181 ttgcagtcac atacggtaac tatttggagc tgcggattcg taatcagctc acacatttcg
      241 cgcagacctt gcgtgccgca acctatataa gcaagacgca gtttgtcact cggcgcaacg
      301 tagccacgac cgcctaacac atgtcgtggc aaaatagtaa aagcaactga tgcggcagca
      361 gaggtgttga tgaaatcgcg gcggttaaag ttttttttat gattcattat gggcaatttt
      421 tgaaatgagt tctgaaaaaa atgggaagca gaaaatgcag gaataaattt agctcttatt
      481 ctcaaaacat ttgctgatcg acaggcgacg aaaggttcga attcaaaaaa tttaccttcc
      541 aggtagctaa ttgcaaaaca accgcgccga atttgccgta acagtaaggg agtcattttt
      601 atacgactat aatccgcgat tacgatgatt cagcctctta tgacctgata aaaaaatatt
      661 gcagtaacta aaaatctgaa aaccgtcacg ctgaattcct tcctgcgtta ataatgccga
      721 atgagcatcg catagcaagc ttctcgtatt tttctttaat agactcagcg tctttcactt
      781 cgcggacctg catgagtgcg tattgttgta tagttacgag cgggaccacg atgcgttcgc
      841 gcatttgtat acttgaattc tctaccggat agtcggacat gagtgattga ttcgacgaaa
      901 gcttttcaac ataatttacc gttagcctga attcatcgtg cattagcttc caaagttttc
      961 cataccgtgg atggtctgaa aggtactgtg ttaaggggaa aaaacatttc atcattgcca
     1021 tctcgcaatt gtcagtgagc gttttgaaaa atagagaatt tcgatacaat cgctgcacat
     1081 atttccagtt gccggcggcc tccgcttttt tgagcgcagt gccaacgcca tagtaaccgg
     1141 ttacgttttg cttcaactgg ctaaatgctc ctacaaaagg tatggcgcga agatctttca
     1201 aagacaaacc ggaagccttg ccgcgctttg ccgggcggct gccgatattt gtttctgcgt
     1261 aatatcgcaa tggacttatt tcggcgagat aatccacaaa tgcaggatga tttttcaatt
     1321 gcaggtatgc gttgtagctg tcttcggcaa gctggcgcag caatctttcc tcacttcgtc
     1381 ccaacgtgtt ttcttttgcg gagaacaacg cgtttgaaat gcctgcgttg atcaattgtt
     1441 caatgttgaa ttgcgcggcg ctaatagttc cgaaatttga gctgacggtt tgaccttgta
     1501 ctgtaagctg tatttctttg tttgaaatat cgctgcccat cgatgcataa aacttgtgtg
     1561 ttttcccgcc accgcgtgcc ggaggtccgc cacgaccatc aaaaaatatc acgtcgatgc
     1621 cataactttt tgaaacgcgc gtcaattctt ccttggcttt ataaatgctc cagttggcca
     1681 tgaggtaacc gccgtcttta gtgccatccg aaaaaccaag catgatcgtt tgggtattct
     1741 gcctctgggc aagatgttgc cgatatatct tgttggtgta aagttttttc atgatcgatg
     1801 cggcatgtgc gaggtcgtcg atggtctcaa acaaaggaac gatatcaacg gataaggctt
     1861 cttttttcca tcctgcaagg aggaacaagc cgtacacttc aattacattc aaagcgctgt
     1921 tgcactgact gatcacatat cgatagcagg cttgtacacc gttttgttgc tgaatggtct
     1981 ttaccgcctg cgccgaacca agtgtgtctg caaaaagctc gttatcgccg aaggagatct
     2041 cagtggcgga taattgcagc aggttcgcga tctttttatc gtcatccagc gaagcgtaat
     2101 tggcaggcaa aacattttgc ccggctaaat agtcaaagaa ttttgcgtga acagaacttt
     2161 cctgtcgtat atcgagcgaa gcaaagtaca aaccgaaaat ggttgtttta aataaaagat
     2221 tgtagacgtc ttccacaaac aaattattgt ttgactgaag aagtgtaatg atttgctgca
     2281 ggatattttc aatttcgttt tgcgttattt tttctgccgt ctcactgtat aaattatcat
     2341 acagtctttt ttcaagcgtg gtgatcagtt cctgcacgtc tttaaatgtg agcctgcgct
     2401 taagccattt tacgtctttg tgataacatc gcagtatgcc ggcacgcagc gtatcggcaa
     2461 ccttcaacgt gatgttagtg gttacaaaag ggttgccgtc gcggtcggcg cccggccaga
     2521 atcccatttg cactaaagga tgtttcacct cgtttgcctg ctgaaattca tgttgcaggg
     2581 ttgacattat atttcctgcc gcgtcgtaaa acacgttctc taaaaaccaa agcaggctga
     2641 cagcttcatc gtacggcgtc ggcttttctt tctttaaaaa tggagtcctg ccgagttgct
     2701 gcaggtaagt gtttacggtt tcggtgtcgt catttcgaag tgcccgggcg aggtcgttaa
     2761 tgataccgag cacctcgccg cgatagaatt gcgtaggatg agcagtaaga acgagacgga
     2821 cggagaaatc gttgagcttt tttagaaaag cgtcgtccat ccgcatttgc gatatttgtg
     2881 agcagagttg cttcaatgtg ccggggccgt tgagatcatt tacttcgcca aacgctgcgt
     2941 cctccagtgc atcaaacagc acaacctgtc gctcggcata ttgcacaaaa cggaacagaa
     3001 gatcgatccg ttcgtcctct gtttgataag tagtgttctg tttaagaaag tgttcgatta
     3061 tttgtgcggg actcttctgc ttgttgaagc cttcttcaca ttgcaacaga aacaacgaga
     3121 gaagcacacc tgttttttct atccggtgaa atggaagaga agtaaataaa ctgttgtaga
     3181 gttggaattt taatccaaca tgatttttga attcctgtaa tgccgccgaa gaagactgac
     3241 tcataactgt aataaatata aaataattat ggcagcatcc gggatgaaga taggaaaaca
     3301 attttattca actcatggtg atattcggga gggcgtgtta ttgagacaaa cacagaaaag
     3361 tgttttca
//
LOCUS       DASQJI010000319         2717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2033008,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000319 DASQJI010000000
VERSION     DASQJI010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033008"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VEV83_08920"
     CDS             complement(<1..857)
                     /locus_tag="VEV83_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYK45276.1"
                     /translation="MPRLAVFPKAFMHALCKDGSMKLSEWIKLASKLDVDGLEWYAGF
                     LEMNDEKNWTSFRAMAEDQGKVIPMVCCSPDFTHPDRKFREQEIGKEKRWIDMTYALG
                     GSYCRVLSGQRRPQLSIDEGVRLAADCIEECLSYAQERNITLILENHYKDDFWIYPEF
                     AQKTDVFCKLADSIHDSFFGINYDPSNAYLAGEDPIDLLKRVSDRVVTMHASDRYLKE
                     GTIEDLRREEHSAGYAKRLAHGEIGKGLNDYDAIFSELKKVGFNNWISIEDGVEGMEQ
                     LERSVSFLR"
     gene            complement(959..1750)
                     /locus_tag="VEV83_08925"
     CDS             complement(959..1750)
                     /locus_tag="VEV83_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK45277.1"
                     /translation="MQLENKVVIVTGSTTGIGKAIAIRCVAEGAWVVVTGLEEDWGND
                     VMNELGTERAVLHIADISDDDTPQILVDRAIKTFGGLDAIVNNAAIVASSNLQTTDKN
                     FLRRLLEVNTVAPFALIKAALPHLEKQHGCVLNIGSVNAYSGEPNLFAYSVSKGALTT
                     MTRNLGDTLFRENGVRVNQINPGWVLTETEVERKKKHGLADDWYKDLPSVYAPAGRIL
                     KPSEIAAAAVFLLSDECGPVSGQVMDLEQYPFIGRNPPKDQTTIK"
     gene            complement(1753..>2717)
                     /locus_tag="VEV83_08930"
     CDS             complement(1753..>2717)
                     /locus_tag="VEV83_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HYK45278.1"
                     /translation="EKPAIGDDDVLLEVANVGVCGSDLHQWTADHSWPVNYPVVLGHE
                     FGGYIADVGKHVTNWKAGDKVVSETAAVINPNNPLSKAGLYNLDPDRKGFGYGVNGAM
                     TKYVKVPARCLHRVPDHLSFEQACLTEPCCVAYNAVVSNSRIQPGDRVIVLGPGTIGI
                     LCAAVAKLCGADVAVTGLEADRQRLEVARQYGCDVIVGDATEWAKKRDGLGADSVIDA
                     AGTSITLKIALDLVRPNGHITKVGWGPQPLGFSLDPLVQKNVTLQGSFSHNWPIWERV
                     IALLASGQLDVKPIIGGVWPITEWYDAFTKMHHGEVVKSVLKPV"
BASE COUNT          677 a          727 c          544 g          769 t
ORIGIN      
        1 ctgcgaagga atgaaacact tctttccaac tgctccatgc cttcaacgcc gtcttcaata
       61 ctgatccagt tattgaagcc aacttttttt aactcagaaa agatcgcatc gtaatcgttt
      121 aaaccttttc cgatctctcc gtgcgcgaga cgctttgcat agcccgcact gtgctcctca
      181 cgccgcagat cttcaattgt tccttctttc aaataacggt cacttgcatg catcgtcact
      241 actcgatcag aaactctttt taataaatcg attggatctt cgccggctaa atatgcgttg
      301 ctgggatcat agtttatccc gaaaaaagaa tcatgaatgc tgtcggcgag tttgcaaaaa
      361 acgtctgtct tttgcgcaaa ttcgggatag atccaaaaat cgtctttata atgattctct
      421 aaaataagcg tgatgtttct ttcctgcgcg tacgacaaac attcttcaat gcaatctgcg
      481 gctaatcgta cgccttcgtc aatagaaagt tgcggccgcc tctgtcctga gagcacacgg
      541 caataggaac cgccgagtgc ataagtcatg tcgatccatc ttttttcttt cccgatctcc
      601 tgttcccgaa atttcctatc aggatgtgtg aaatcgggtg agcaacacac catcggaatt
      661 actttgccct gatcttctgc cattgcacga aagcttgtcc aattcttttc atcgttcatt
      721 tccaaaaatc ctgcatacca ttcgagccca tccacatcaa gttttgaagc gagcttgatc
      781 cactcgctca atttcatgct tccgtccttg cataaggcat gcatgaacgc ttttggaaag
      841 acagctaacc tgggcatgat gactgatgac cgttaacaga tggcagatga cggatcgcgg
      901 tttaagcttg agactactgt caaccgtcaa gcgtcaactg tcactttttg ttttcagttt
      961 attttatagt tgtttgatcc ttcggtggat tgcggccaat gaacggatac tgctcgagat
     1021 ccatcacctg cccgcttacc ggcccacact catcactcaa caaaaaaaca gcggcagcgg
     1081 caatttcgga tggctttaaa attcttcccg caggcgcata cacggatgga agatctttat
     1141 accaatcgtc ggccagtcca tgttttttct ttctttcgac ttcagtttct gtaagaaccc
     1201 accccggatt aatttgatta acacgcacac cattttccct gaataatgtg tctccaaggt
     1261 ttcttgtcat cgtggtcagt gcaccctttg aaacgctgta cgcaaaaaga ttaggttcac
     1321 cactataagc gtttacagaa cctatattga gaacgcatcc gtgttgtttt tccaggtgcg
     1381 gcaacgccgc ctttatcaaa gcgaatggcg cgaccgtgtt cacttcaagc aatctgcgta
     1441 aaaagttttt atctgttgtt tgaagattcg acgatgcaac gatcgccgca ttatttacaa
     1501 ttgcatccag cccgccaaat gttttaatag cccggtcaac gagaatttgc ggggtatcat
     1561 catcgcttat atcggcgata tgcaacacgg cacgttcggt gccgagttca ttcatcacat
     1621 cgttgcccca atcttcttcc aaacctgtga ccaccaccca tgccccttca gcaacgcaac
     1681 gtatcgcaat cgctttacca atgcctgtcg tactgcccgt aacgataact actttatttt
     1741 ccagttgcat gatcacacag gttttaaaac gctttttaca acctcaccgt gatgcatttt
     1801 tgtgaacgcg tcgtaccatt ctgtaatcgg ccatacaccg ccgatgatcg gctttacatc
     1861 caattgacca cttgcgagca acgcaataac tctttcccag atcggccagt tgtgactgaa
     1921 actgccttgc agtgttacat ttttttgaac cagcggatca agagaaaatc caagtggctg
     1981 aggcccccat ccaacttttg ttatgtggcc gttcggtcgc acaagatcga gagcgatctt
     2041 gagtgtgatg ctcgtgcccg ctgcatcaat cacagaatct gcgcctaagc catcacgctt
     2101 ttttgcccat tcggttgcat cgcccacaat gacatcgcaa ccatactgtc gcgcaacttc
     2161 aagcctttgc ctgtccgcct caagaccggt aaccgccacg tccgctccgc ataattttgc
     2221 aactgctgcg cagagaatgc cgatcgtgcc cgggcccaaa acaattacgc gatctcccgg
     2281 ttgtattctt gaattactga ccacagcgtt gtaggcaaca cagcatggtt cagttaggca
     2341 ggcttgctcg aaagaaagat gatcgggaac gcgatgcaaa catcttgcag gtacttttac
     2401 gtatttcgtc atagctccgt tgacgccata gccaaaacct tttcgatcag gatctaaatt
     2461 atataaacct gcctttgaaa gtggattgtt cggattgatg acagcggcgg tttcactaac
     2521 aactttatct ccggctttcc agtttgttac atgcttacca acgtcagcaa tatatccgcc
     2581 gaattcatgg cctagcacaa ccggataatt tactggccag ctgtgatcgg ctgtccattg
     2641 atggaggtcg ctgccgcaaa cgcctacgtt cgctacttca agcagcacat catcgtcccc
     2701 gatcgcaggc ttttcaa
//
LOCUS       DASQJI010000320        24436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2033184,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000320 DASQJI010000000
VERSION     DASQJI010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 24436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24436
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033184"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VEV83_08935"
     CDS             <1..190
                     /locus_tag="VEV83_08935"
                     /inference="COORDINATES: protein motif:HMM:NF016447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45279.1"
                     /translation="EAYGAANILQELLTIKSDDIIGRAKTYEAIVKGDNISKAGVPES
                     FNVLVHELRGLGLDLRFE"
     gene            complement(352..2874)
                     /locus_tag="VEV83_08940"
     CDS             complement(352..2874)
                     /locus_tag="VEV83_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004629 - phospholipase C activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase C, phosphocholine-specific"
                     /protein_id="HYK45280.1"
                     /translation="MDTRREFLKKAALLSGATSFSALPLSIQRALAIDPALGSTYLDA
                     EHVVLLMQENRSFDHAYGTLQGVRGFNDPRAIRLPNNNLVWLQTNEAGETYLPFRLDI
                     KQTKITWMGSLPHTWTDQVDARNNGKYDRWLHVKKPWEDAYAHMPLTMGYYTREDIPF
                     YYALADAFTICDQHFCSSLTGTTPNRLHFWTGTIREEQNENSKANVWNGDADHYTMVS
                     WKTFPERLEENGISWKIYQNDIGAPGIYSDDEDVWLSNFGDNPIEYFTQYNVKLSQRY
                     IDYLQKAVKTLPGEINELESKLQSATGEDAEQLKKNIDDKKATLSRAEEERKVLSREK
                     YEQLSPHEKALHEKAFTSNKTAPFFYELESLQYEDGGVQREVQVPKGDIFYQFRKDVK
                     TGNLPTVSWLVAPENFSDHPSAAWFGAWYISEALDILTQNPEVWKKTIFIVTYDENDG
                     YFDHVPPFVAPNLHKQDTGKTSGIDTSVDFVTIDQERRKKDTPEEDMRESSIGLGYRV
                     PLLVVSPWTRGGFVCSQVFDLTSSLQFLEKFLSHKTGKKIEEPNISAWRRAICGDLSS
                     VFRQYNGEKIAAPDFIDRDPFIESIHKAKFKKEPADYRVLSDNEIAEVNHNAHLSALI
                     PAQEKGTRPSTRLPYELYVDSKSDTNKKSLQIVFTAGKKIFGASAAGSPFVVYNRRKY
                     LGDVMREWSYAVSPGSTITDEWMIENFDGGIYHFSVYGPNGFYREFKGDMHDPSIDVI
                     CAYEQSGEKLSGNVQFLFANNSKEKTEVEIVDNSYKTGTRTLIVDASSTKSIVLDLNK
                     NSNWYDFSVKVKGNDTFEKRYAGHVEVGKESRTDPLMGRVIG"
     gene            3016..4416
                     /locus_tag="VEV83_08945"
     CDS             3016..4416
                     /locus_tag="VEV83_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK45281.1"
                     /translation="MSTSQLNRSLGLRLVVVVVIGNIIGSGVYKKVAPMTAELHSSGW
                     VLICWIIAGIISLLGALCNAEVAGLLADTGGEYAYYQKIYNKFFAFLFGWSLFTVIQT
                     AAISALAYVFAESLNSMIHFPALLPNLADVSIAGVFYPFADLSVKLVAIILIILLTWI
                     NTKGIKTGAGFSMTILLLVFASIFMIIAFGLTSGASSFTRINMQTSPTNPVTVSGAFT
                     AMLAAFWAYQGWASVGYVGGEIKDAKRNLPRGLVIGMLAIITLYLLVNTTYLTLLSIP
                     QLEDVYNSGNKIAAIEAVKTFWGQGGALFISTLIAVTTLGCCNATILTSCRTYFAMAR
                     QGLFFQNATKLNEKQAPVNSLLAQGIWACILVLSGTFDQLTDMIIFAVFIYYGATTLG
                     VFILRKKMPDAPRPYKVWGYPVIPAIVVLFCVALLFNTIFSRPREAAIGAALMLTGVP
                     MYLWFTRKKRDLTQAD"
     gene            4626..5018
                     /locus_tag="VEV83_08950"
     CDS             4626..5018
                     /locus_tag="VEV83_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45282.1"
                     /translation="MGQRLSKSKMLTGTEMKSFSIRIMDTVATDEFKYHRFDTFFWAP
                     RLKAILLGGEYLEENIIWVACYDLNNTLIDHLQVYYDNSEGFSTVLSEINNNLITVFD
                     KADEGNGESKQKPSVYSLNHEGKFIKLK"
     gene            complement(5032..5445)
                     /locus_tag="VEV83_08955"
     CDS             complement(5032..5445)
                     /locus_tag="VEV83_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45283.1"
                     /translation="MAGYSQTPLAKKLGIKEGFIIRYVNAPAYYFKLFSHLPQDITVS
                     DDKSIKKNFIHVFVQNAKELESIIPKVKNEIEENGMIWISWYKKASKITTDVTEDLVR
                     KIALQNGLVDVKVCAIDDVWSALKLVIPVKNRNSK"
     gene            complement(5574..8060)
                     /locus_tag="VEV83_08960"
     CDS             complement(5574..8060)
                     /locus_tag="VEV83_08960"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYK45284.1"
                     /translation="MRIHAALFLAFLMTTFCSLSQTNSTPRILEAKRMSGMIKIDGLL
                     DDEAWKDAAVMTGLVEFRPKIGALEDPANRTVSYLMYNDEGIYFGGFCYERTRDSIST
                     ELKGRDGYGANDYIGIIFDTYNDKLNGFEYFVTPLNEQWDAKMNPPSMMSDMEDFSWN
                     AVWSSGAVITDSGWSFEMFIPFSAIRFGKKDVQDWGFNITRRRRKTEQQYTWNPIDPN
                     VNGFLTQEAIWKGLSNIKPPLRLQFSPYFSVYANHYPYNNPDLDNWSSQVNGGMDVKY
                     GINQAFTLDATLIPDFGQVQSDNQVLNLTPFEVKYNENRPFFTEGTELFSKGDLFYSR
                     RIGGEPIHMYDVYDEIDSNETVIKNPTESKLINATKISGRTQGGLGIGYLNSITSPQY
                     ATVENINNKEQRKILTNPLTNYNVLVLDQTLEHNSSVSFVNTSVWRSGSDYDANVSAG
                     LFELNDKKNTYNLGGKFAVSNLVNYLPDGKTQTGLSHELHVQKTSGRYNFMLSQERTD
                     TKFTSDDLGYFTNNNYINHYLWMGYKWTEPRSWYNRININFNQNIGFLSKKIEPIDET
                     YQFARFNVNANVQSKKLWFLGVFSGYSFKQNDFYEPRTTGWFFKKGSSIDFGSWFESN
                     DSKKYSYNVQLFTHKYLDFYDGFYLDLEFTHSYRFGNKLSVSQTIQYNPSYNNVGYVY
                     VDGSADIDFAKRKVNTIEQVVNVKYNFNNKMGITFRARHYVSSVDNKEFFLLQRDGTL
                     LPHPDFHPQVNQNVNYFNIDMVYTWEFAPGSFLNIVWKNAAQNDTNQVEEHYFKNLSN
                     TIDGAGNNNVSLKVIYFLDYLRLQRGRKSS"
     gene            8283..9512
                     /locus_tag="VEV83_08965"
     CDS             8283..9512
                     /locus_tag="VEV83_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HYK45285.1"
                     /translation="MKGKQKFFTILVLGLLSAIGPFSIDMYLPGFPAIAAALHTTVPQ
                     VALSLSSFFIGISFGQFLYGPLLDRFGRRPPLYAGISLYFLASLWCVFATSVHMLIVL
                     RLFQGLGGCVGMVAARAYVRDIFPVHEIAKIFSLLMLVIAVSPIVAPTSGGYVTAHLG
                     WQYIFVVLTVFSALILALMHFVLPAGRPADKSLSLKPKPIVRSFLAVFKNPQFLTYAL
                     TGSIAASGLYAYVSGSAYVFMQLYKVTEQQFGWIFAIIAAGLIASSQVNSLLLRNFES
                     SEIIRVALLCQAITGIILLLGAVFNIWNVYAMIIGIFIFLCCQGFTFPNASALCLAPF
                     SKNAGTASALMGGIQMITGTLSSALVSVLANGTSLPMTAVMGGCSLSAFLILMIGQKK
                     IGYRTELKEVEEKEFVY"
     gene            complement(9582..10541)
                     /locus_tag="VEV83_08970"
     CDS             complement(9582..10541)
                     /locus_tag="VEV83_08970"
                     /inference="COORDINATES: protein motif:HMM:NF014627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HYK45286.1"
                     /translation="MKKLLRKIVVHDHRRSKKEPYSRYRIAKQIKQLRRDIWNNTRSF
                     FFVTAGIFSAAFGLKGFLLPNNFIDGGATGISLLIAEVSGVSISILLLLVNIPFVLLG
                     YKAIGKQFAIRTMLAITGLAVCVALVQFPDVTDEKLLVSVFGGFFLGAGIGLSIRGGA
                     VMDGTEVLAIFLSRKLQTTIGDIIILVNIVVFSVAAYLLSVDTALYSIITYLAASRTL
                     DFVIEGIEEYMGVTIISVHTEQIRQMIIDVMGRGVTVYTGKRGYGKSGEVKERDIIFT
                     VITRLELSKLNNEIEKIDRNAFIVMSSIRDTRGGMIKKRPLKH"
     gene            complement(10652..12334)
                     /locus_tag="VEV83_08975"
     CDS             complement(10652..12334)
                     /locus_tag="VEV83_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HYK45287.1"
                     /translation="MSRIFTITTGLENMGALKTGGQGSVYKGRRVGEIITAIKLLPTP
                     IYSETGDDKNFTHFQNEVQKLKKVNEEPNPNVVKILSSGITETGNFPFIEMEFIEGPD
                     LEELLRPPNDSIFTIKETLKVADHLSNALAHCHRANVKHGDIKSNNVKFNLHTGNYVL
                     LDFGLAIMSDEERRTSLRHAGAIEFMAPEQNEGRMYFETDVYSFGVIMFELLAGIVPF
                     PLRDKGETARNAVMLAHMETPPPNLFSLRGKALPARWSDSKKEAEMQVPEWMFSMVYR
                     CLEKKPAARFASGMALHDYICQNNVWTAAKANSSEQVSLLEEENKRLLRENREMQEEL
                     FRYRKQAKKGDAISIKTNSTLIQDGEPGVKNATQPTKKKYFSGKTFFWVVLGLFVLIV
                     FVFAMVNGTKQPGSSQNKTLIKADTVTKLTEEEQNAITVQLENAKQLLRENRKDEALD
                     VYQQLVQQNVPQAMFQYANLALQNKNSKINCSEAFDLLTKASERDYLPAKTALGFLYS
                     FANDDQLMKEHSYYARCVFTKDVYRGAHLLMEAAIEGDSTAAYWLDKLDQQQ"
     gene            complement(12331..13125)
                     /locus_tag="VEV83_08980"
     CDS             complement(12331..13125)
                     /locus_tag="VEV83_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HYK45288.1"
                     /translation="MLDLFKQQKTKDVKLLRSYILDFIKDQLKKTESGEGSNIRGLQL
                     YITCPESEKYIYASAVYLEQEDRFKEEEVQKIADDFAIALPEQWSMDIVFAPEAPPEA
                     IAASDADIALFISTEKRRAIHKERSALIKVLEGEAEHESYIIHSSTRKINIGRENKVH
                     TPDGFYRENEIAFPGNSANKSNRSISRQHAHIEWNEDASAFFLFADDGGIPPLNKIKV
                     RTADGNLVKLLTTEIGYQLHEGDQVILGESALIQFGYVEEDNPSLK"
     gene            complement(13230..17390)
                     /locus_tag="VEV83_08985"
     CDS             complement(13230..17390)
                     /locus_tag="VEV83_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HYK45289.1"
                     /translation="MAAKTQKRVNRNTERIFLLLITVVMAVLFYKLYTVISGDFADVP
                     ARLSNGTMMNLNDPKPGQAMRTLLQKGRYYRDGKDIDLISSTFEKARLADTGSIDNIG
                     DLNKKNYNVDENTALLHGGESFKKRVAAERIILGFTDEDSILFADLKKNPAAVPATNN
                     LSMGRFNIGGVVRTGAGQPVPNVVVRAQLILPQDSVYSNKVEEVAGELVDNTTTVRKL
                     YAVDSLKNTQLQSLTAYVQTDAAGNFSFIGLPDNRAYEVLPLQPGFSFGNSQGTSELK
                     QNVAFSFYQAPHSLKLFSTKDFNTLKKEKALIVRTPEYVKQWYWIIVAAFFAGFIIIH
                     LLLSIRFKEADQLILPVVMLLTGLSFLTLLSLQDPLRDWFLAKSTLFYFASGVAGIIL
                     LMLFDLRRFTTDSSLYRVFLFKRMKLAGTGWPWAVIATGLLALTILFGTGPEGSGVKV
                     NLFGFQPSEIVKYLIVIFLAGFFATNEKFISAYNSWTRRWYFFIFALVAILTTIFLFL
                     ILGDLGPAMVCCFTFIILFSFSRGDFIHMAGAVVLYVLAVWILKDVWMATGIVAGVLI
                     LYTLLAKKKLSESTLMALVLIAAFLLLDKIPYMAQYFPGPMQRLIDRKAIWQDAWNNE
                     VFGGDQVANGIWAMSSGGVTGQGAGEGFAKTIPEAHTDMILPSMGEEFGWAGIVAVFI
                     LFLIYLHRSIIIGRHTGRPFLFYVCAGIGVASFVQFLLIAGGSTGALPLSGVALPFMS
                     YGGSSLIANMLAAGFLLSASHIEGSPPQMKYISLQQDKNLIPALMAACMGIVLLSINV
                     SRYLFNNEKWVVQPALVADRSGGRMFSYNPRISILINRLQAGDLLDRKGLILATSHPE
                     SINKEIDSLHALGIEQSDIDELFYKRLDRYYPFSQQMFFWTGDANTNVFNGAPNGYFA
                     EYAQAPEMRGFPIPATKYTVSATRFKEDKFLPQTSVEMTVVKRDYSALAPLLLAGINS
                     KEVQEFRQRNRDVQLTVDASLQTRLQNSLQTDDSLVNNRISIVVMEDNTGDVLASATY
                     PLPPVDDWDMLNLTPIQQNKLPYWITDNDLGFTIATQPGSTAKMITALAAFNKLGIDA
                     AKKIIVVHPWDLIRTTGPEPDEAGNITIERAIVRSNNSFFIRLANQEQLQEEMGTLYL
                     KSGMFLHGVGGYYYSYDGTNIEQQNEWRELWRKTEFTSVKHYDPNNIRRTRGRGVSGM
                     AWGQGELIATPASVARIAAGIANNGMMVPNRFVMSVNGRPSAINKGVPLANDSAYAKL
                     MTQYMKEQSASKVSKLGIAVAGKTGTPERILKNERINDGWYVFFAPKPTGPGHIVTCI
                     RIENCKGSSVAVKLAGKHVVPVLQQLGYIKGFENETKQKRPINKTNDRPVLINDSVNI
                     ARLADSTR"
     gene            complement(17396..18814)
                     /locus_tag="VEV83_08990"
     CDS             complement(17396..18814)
                     /locus_tag="VEV83_08990"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HYK45290.1"
                     /translation="MAENFYGITDTGKMRDNNEDAFIAENVLHDRYIAACVIDGVGGY
                     EGGEIAATLAREAILDHLKDPFEDVTGTLKKSFVAANEKIYKEKHITGQNGQMACVLT
                     LALADISENKFYYAHVGDTRLYLFRDDSLVKVTHDHSFVGFLEDSGRLSEEAAMHHPK
                     RNEINKALGFDQVEFSQPGYIETGESPFLPGDIILLCSDGLSDMLSNKVITSILSSDQ
                     SLKDKCRSLIGAANDAGGKDNITVVLVENDKLRPSLTATRPAAKKKEVQEQEPAVRNE
                     PEIPVDDTEEIQPRGRRSAVVILAILLFLSLAALSWFVYHDYLRKPKAVMPAPATVHN
                     VDTAGIKLSDSINRPVAKEIYLSRIFSQPIYLHDSIAITRDSLTIHGGGIKIIADSNY
                     RGAAFMLPQNCKYILIDSLVLENFATGFIVHNTALHLKNVRFTNCDIPVAHQIHLPND
                     KSVSGKLEDGSFSYPDSQQVKH"
     gene            complement(18908..19861)
                     /locus_tag="VEV83_08995"
     CDS             complement(18908..19861)
                     /locus_tag="VEV83_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45291.1"
                     /translation="MKTKTSFWQRMGFHEWFLKREADSTLTEPPILTPDDVYKFVLQK
                     FEASVRELSFANRVVFYHEYIVCFNEEDYNQFTQNKKGIFGLIVQESVKQFYNILSQY
                     KLQGKTVSPASNKWVFRFVSHPEYQRGDKSLIGKLMPGGQQQKEENVRITFIPRQTGI
                     AETFDVNPEILQGFTFYSEGYYEVPYDENFATDDKELSASDTTVFARLETIIPDKEFA
                     GKKLEYYMREKDILVSGKDETGDKPNIFRIPSDWVNTPHLRIRFDKSDNKFYLASFGE
                     KTIVNENEIELSDVNDPSWVQLPINSRIVLNGIVGVNIFKS"
     gene            complement(19870..20346)
                     /locus_tag="VEV83_09000"
     CDS             complement(19870..20346)
                     /locus_tag="VEV83_09000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45292.1"
                     /translation="MRITLLCKILIAGVCSSTALACTNAHNDPAFEFYYYPARNVYYD
                     VSNSRYIYSLNGGRTWDTLYKKGDAGAPTLGRKEIIYSRVANPWDSNEVHINRYGGYL
                     LDVPSIDSNTAEAIVVSERKPATKAKSVTPSTANNSENNKSEKKPGFFKRLFGKKH"
     gene            complement(20518..22890)
                     /locus_tag="VEV83_09005"
     CDS             complement(20518..22890)
                     /locus_tag="VEV83_09005"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HYK45293.1"
                     /translation="MKLIRNAACCLCLIWCFNAANAQLYKITLDQKIGNASLIVEGQV
                     IDQRSFWNQQHTLIYTSNTVQVFKLFKGNLVSKQVEVITQGGNVGGKALVVSDLLELR
                     KGDVGMFFCLQHQNNLRSPFTNNILYDVFSSDQGFLRYNLENHHAYAPFAEYDDIEST
                     LYRVVKQKTGLAEKIIDTSFNIMHAGVSSNGVGGTLATITSFSPTTVHAGALNDPANN
                     VLTINGSGFGSSPSGSAGINFKDANNAHVTPDYKISFNSPYIISWTDSKIVVNVPDRA
                     GTGLFAVVLSNGTSVSSPSDLKVFFAVLDAQFTVAVDVNKVGEPRLMNTNGSGGYTYQ
                     YSNSTKGGGVDFTTSPAKQTFERAVATWKEIVGANLTQGAATDLQSVADDDVNLVLYD
                     NNNTGVDQMAAGVLETTYSWFSACQSGQTLLTPQKTGFDILIRNNGVSLGADVSFEEG
                     PCFPNVGSYDLEMIILHELGHALNLSHINDDYEGGAGGNYNTVNPSKLMHYAILDFVD
                     RRSPDASAYQGALYTTTPQGNSYGSCGLFTSEMSPLSRNVPPNDECPSSFPASPIAPN
                     TTVIFDLTHATSNKFADPAFTQVNCQNTGTSVTNNAYYAFMSGTRTDLTLTVSDYTTT
                     PPALSSCNGQGVRLAVYDVSSCPDGQNYPQPGACLSFNSDREISISGLQQNHKYLLYF
                     DGLRNTKASFSVKFNSDSSSQTPTTIVTVYPNPVPNGTLTVKLENAAGSEYEYALFDM
                     IGKLVTQGRVSVSQSTQTFTIRMDSYASGVYFLKLVDENGKEVSTTKILK"
     gene            complement(23032..23472)
                     /locus_tag="VEV83_09010"
     CDS             complement(23032..23472)
                     /locus_tag="VEV83_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3276 family protein"
                     /protein_id="HYK45294.1"
                     /translation="MAYENNDKKMESVYSKRIKAGKRRTYFFDVRATRGNDYYLTITE
                     SRKRFNDGGYDRHKLFLYKEDFNKFIKALNEAVDYVKTELMPDFDFDSYNHEYTDAAP
                     AIDGTEIEMEVENVVEDVEENVVVENVVANVPGTDTAPEEVDKW"
     gene            complement(23567..>24436)
                     /locus_tag="VEV83_09015"
     CDS             complement(23567..>24436)
                     /locus_tag="VEV83_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK45295.1"
                     /translation="IGSVASMVQRAAASQKRINEFLHTKPVIIDPVKAGQKHAPLQGD
                     IIFENVSFTYPNTGIQALKNISFHVRTGEKVMILGKTGSGKSTIAQLLLRFYDPGRGQ
                     IVVGDQNIRFVSLKDLRNYISYVPQDVFLFSDTVANNIRFGMRGQSEEEIEQFAKYAA
                     IHNEILSLDKGYQTTVGERGVTLSGGQKQRVSIARALLKNGSIMLFDDCLSAVDAKTE
                     NMIVNNLNEFLRNKTTIIITHRILLSIPFDKIIILDEGEIVETGTHAELLSRDGYYAE
                     LYNLQLSEEATVN"
BASE COUNT         6331 a         5632 c         5177 g         7296 t
ORIGIN      
        1 cgaagcgtat ggtgcagcaa acattctgca ggaattgctg acaataaaat cagatgatat
       61 tatcggccgc gcaaaaactt atgaggctat tgtaaagggt gataatattt caaaagcagg
      121 tgtgcccgag tccttcaatg tgctcgtgca tgagcttaga ggtttaggcc ttgacctaag
      181 atttgaatag tggctcgaaa aggttttaac tgacgtaaca tattaaaagc cgtctcgaat
      241 gcgaggcggc ttttaattta tcaggtatgc cggaagaaac caatcaagat ccataccgcg
      301 ccgcggctgt cctatttttt tcagcgaggc atctcaattt ttttaattct ttcaaccgat
      361 cacacgtccc atcaacgggt cggtgcggct ttcttttcca acctcaacgt gccccgcata
      421 tcttttttca aatgtgtcat tgcctttgac tttcacactg aaatcatacc agttagaatt
      481 tttatttaga tcgagtacta tactttttgt cgagctcgca tcaacaatga gtgttcgtgt
      541 gcccgttttg tacgagttat caacaatttc cacttcggtt ttctctttag aattattggc
      601 aaacaagaat tgcacattgc cgctaagctt ttcaccgctt tgttcgtaag cacaaatcac
      661 atcaattgag ggatcatgca tatcgccttt gaactcgcga taaaatccgt tcggaccgta
      721 gacggagaaa tgatatatgc cgccgtcgaa gttttcgatc atccattcat cagtaatagt
      781 tgagccaggg cttacagcgt atgaccactc tctcataaca tcgcccaaat atttacgacg
      841 gttataaaca acaaacgggg agccggctgc cgacgcgcca aatatttttt ttcctgctgt
      901 aaatacaatt tgcaaactct ttttgtttgt gtctgatttg ctatcaacgt acaactcgta
      961 aggaaggcgc gtggacggcc gcgttccctt ttcctgtgcc ggaattagag cagatagatg
     1021 cgcgttatga tttacctcgg caatttcgtt atccgacaat acgcgataat cagcaggttc
     1081 ctttttaaat tttgccttat gaattgattc aatgaatgga tctctgtcga taaaatcagg
     1141 agccgctatc ttttctccgt tgtattgcct gaatacagaa ctaaggtcac cacatattgc
     1201 ccgtcgccaa gcgctgatgt ttggctcttc gatctttttt ccggttttat gactgagaaa
     1261 tttttcaaga aattgcagtg aagatgtgag atcaaaaact tgcgagcaaa cgaaacctcc
     1321 ccgcgtccag ggagacacaa ctaacagggg aacacgataa ccaagcccga tcgaactctc
     1381 acgcatatct tcttcgggcg tatctttctt tctgcgctcc tggtcgatgg tcacgaaatc
     1441 aacgctcgta tctatgccgg aagttttgcc cgtgtcttgt ttgtgcaaat tcggtgcaac
     1501 aaaaggaggt acatgatcaa agtatccatc gttctcgtca tacgttacga taaagatcgt
     1561 cttcttccat acttccggat tttgagtgag tatgtcgagc gcctcagaaa tataccacgc
     1621 cccaaaccac gcagcactcg gatgatcaga aaaattttcc ggcgccacaa gccaggagac
     1681 tgttggcagg tttccggttt ttacatcctt tctgaattga taaaaaatgt cccccttggg
     1741 aacttgcact tcgcgctgaa cgcctccgtc ctcatattgc aaagattcaa gttcataaaa
     1801 aaatggagca gtcttatttg acgtaaatgc tttttcgtgc aatgcttttt cgtgaggtga
     1861 taactgctca tatttttctc ttgaaagaac ctttcgctcc tcttctgccc tgctgagagt
     1921 tgctttctta tcgtcaatgt ttttcttcaa ctgttctgca tcttcaccgg ttgctgattg
     1981 cagctttgat tcaagctcat tgatctcgcc gggtaacgtt ttgactgcct tctgcaaata
     2041 atcgatgtac cgttgcgaaa gttttacgtt gtattgcgtg aaatattcta tggggttgtc
     2101 gccgaaattt gaaagccaaa catcttcatc atcggaataa ataccggggg cgccgatgtc
     2161 gttttgatag atcttccacg agattccgtt ttcttcaagc ctctcaggaa aagttttcca
     2221 actcaccata gtgtaatgat cggcatcgcc attccaaaca tttgccttcg aattctcatt
     2281 ttgttcttca cgaatcgttc ccgtccagaa atgaaggcgg tttggagtgg tgccggttaa
     2341 tgacgagcag aaatgctgat cacatatcgt gaatgcatcc gctaatgcat aataaaaagg
     2401 aatgtcttca cgtgtgtaat aacccattgt caaaggcata tgtgcatacg catcttccca
     2461 cggcttcttt acgtgaagcc accggtcgta tttgccatta ttcctcgcat caacctggtc
     2521 agtccaggtg tgcggcaatg agcccatcca cgtgatcttt gtttgtttga tgtcgagtcg
     2581 aaacggcaag tatgtttctc ctgcttcatt tgtttgcagc cacactaagt tgttgttcgg
     2641 taacctgatc gcccgcggat cattgaaacc acgaacgccc tgcagcgtgc cgtatgcatg
     2701 atcgaatgaa cgattttcct gcatcagcaa aacaacatgc tcagcatcga ggtatgtact
     2761 gccgagggct ggatcgatcg caagtgccct ttgaatcgaa aggggtaatg cagagaaact
     2821 ggtagcgccg gaaagcaaag cagctttttt taagaactct cttcttgtat ccaaaaaata
     2881 aattttagta aaagtagaag aatatatgtt tgacagatgt gtcttctatt ttcatcgccg
     2941 catgtcagaa actaaattag ctatattcgt cgggtttcat tttatttgtc gctcatcgaa
     3001 ccaaaatcaa aacaaatgag tacatcccaa cttaacaggt cgctcggttt acgcctggtc
     3061 gtagtagtag tgatcggaaa tattattggt tcgggtgtgt ataaaaaagt tgctccgatg
     3121 actgccgaat tgcattcgag cgggtgggtg ctgatatgct ggatcatagc aggcatcatt
     3181 agtttacttg gtgcgttatg taatgcagaa gttgccgggt tgcttgctga cacgggaggt
     3241 gaatatgcat actatcaaaa aatctacaac aagtttttcg catttttgtt tggatggtcg
     3301 ttgttcactg taatacaaac tgcagctatc tcagccttag catatgtatt tgctgaatct
     3361 ctcaacagca tgatacattt tcccgcacta cttccaaacc ttgcagacgt aagtatcgct
     3421 ggtgtatttt atccgtttgc ggatctcagc gtaaagctgg ttgccatcat acttatcatc
     3481 ctgcttacct ggatcaacac gaaaggaata aaaacgggcg cgggctttag tatgacaatt
     3541 ctgttgcttg tctttgcaag cattttcatg atcatcgcat ttgggttaac gagcggtgcg
     3601 tcgagtttta cccgcattaa tatgcaaaca tcccccacaa acccggtgac ggtaagcggc
     3661 gcgttcaccg caatgcttgc tgccttttgg gcttaccagg gatgggcttc agtaggctat
     3721 gtaggaggtg aaataaagga cgcaaaaaga aatttgcctc gtggcctcgt aatcggaatg
     3781 ttggccatca taacgcttta tctcctggtt aatactacct atcttacttt attgtcgatc
     3841 ccacaactgg aagacgtata taactcaggc aataagatcg cagctataga agcagtgaaa
     3901 acattttggg ggcagggcgg cgctttattt atttctactt tgatagctgt taccacgctg
     3961 ggttgttgta atgcaaccat actcacaagt tgccgcactt atttcgcgat ggcgaggcaa
     4021 ggcttatttt tccaaaatgc cacgaagttg aatgaaaaac aggcgccggt caactctttg
     4081 ctcgcccagg gaatatgggc gtgcatcctc gtattgtccg gcacattcga tcagctaacc
     4141 gacatgataa tttttgcggt gttcatttac tacggcgcaa cgactcttgg tgttttcata
     4201 ttgcgcaaaa aaatgccgga cgcgcctcgt ccatataaag tatggggata tcccgttatt
     4261 cccgcgatag tagttctctt ctgcgtcgct ttgcttttca atacgatctt tagcagaccg
     4321 cgcgaagcag ccatcggtgc ggcacttatg cttactggtg tgccgatgta cctttggttc
     4381 acacgaaaaa aaagagatct tacacaagcc gattaaatca caattgaaca taaggaaggg
     4441 cggtttaccc gcagcgtgcg ttttattatt aagcggcctg ttcatcctgc aatacctgga
     4501 gcgaaaaaag cattgacagc gattcccgta aaagcgatag ttctattgca tctaacgaag
     4561 cagttactgc gaacgataac tcgaatgacc cggtgttttt ggaacgtgtg atcctggaaa
     4621 aaagtgtggg gcaaagacta agcaaatcga agatgctgac gggcacagaa atgaaatcgt
     4681 tttcgattcg tataatggat actgttgcaa cagatgaatt caaataccat cgctttgaca
     4741 cttttttttg ggcgcctcga ttaaaagcca tcctgctcgg aggcgaatac ctggaggaaa
     4801 atataatttg ggtggcgtgc tatgatttaa ataataccct catcgatcac ttgcaggttt
     4861 attatgataa ttcggaaggt ttctcaaccg tcctttcaga aataaacaat aacttaatta
     4921 ctgtttttga caaagccgat gaaggcaatg gtgagtcgaa acaaaaacca tcagtgtatt
     4981 cattgaacca cgagggaaaa ttcattaagc tcaaataaat atctcgtcgt attatttaga
     5041 attgcggttt ttcaccggaa tgaccaactt aagggcggac cacacatcgt caatggcaca
     5101 gacttttacg tctaccaggc cattttgcaa agcaattttt cgcacgaggt cttcggtaac
     5161 atccgttgtg atttttgacg ccttcttgta ccacgatatc cagatcattc cattctcttc
     5221 tatttcattt tttactttcg gtataattga ctcgagctct tttgcgttct gcacaaaaac
     5281 atggatgaaa ttttttttaa tactcttgtc gtccgaaaca gttatgtctt gcggcaaatg
     5341 agagaataat ttaaaataat aagcaggtgc attaacgtat cttattatga aaccttcttt
     5401 aatgccgagt tttttagcga ggggagtttg tgagtagcct gccattacct aaatatttct
     5461 ttgggatgaa ataaaagctg ataaaaagat ctccaaattt gccgatttgt ttccatcacg
     5521 attgcatata aaactgaaag atgcaattgt ttgggctcaa ttttacagta caactaagag
     5581 cttttgcgac cgcgttgcag cctcaaatag tcaagaaagt aaattacctt aagtgaaaca
     5641 ttattgtttc cggcgccgtc gatcgtgttt gaaaggtttt taaaatagtg ttcttccacc
     5701 tggttggtat cattttgcgc tgcatttttc caaacgatgt ttaagaagct gcccggtgca
     5761 aattcccagg tgtaaaccat gtcgatattg aaataattta cgttctggtt tacctggggg
     5821 tgaaaatccg ggtgtggcaa aagggtgcca tcacgctgca gtaaaaagaa ttctttattg
     5881 tcaaccgaac ttacatagtg cctcgccctg aaagtaatac ccatcttgtt gttgaaatta
     5941 tattttacgt tcacgacctg ctcgatggtg ttcacttttc gctttgcaaa atctatgtca
     6001 gcgcttccgt caacatatac atagccaaca ttattgtacg aaggattata ttgtatggtc
     6061 tgggaaactg acaatttatt accaaacctg tagctgtgcg taaactccag gtccagataa
     6121 aaaccgtcat aaaaatcaag atatttatgt gtgaacaact ggacgttgta actgtacttc
     6181 ttactgtcat tgctttcaaa ccatgaacca aaatcgatcg aagaaccttt tttaaaaaac
     6241 caaccggtcg tccttggttc ataaaaatcg ttttgcttaa aactatagcc ggaaaacact
     6301 cccaggaacc atagtttctt gctttgcaca ttggcgttca cgttgaacct cgcgaactgg
     6361 tacgtctcgt ctatcggttc gatcttttta gacaggaaac caatattttg attgaagttt
     6421 atattgatcc tgttgtacca actccttggc tctgtccatt tgtagcccat ccacaaatag
     6481 tggttgatgt aattgttgtt ggtaaaatag ccaagatcat cactcgtaaa ttttgtatct
     6541 gttctttcct gcgaaagcat aaagttgtaa cgtccgctgg ttttttgaac atgcagctca
     6601 tggctaagtc ccgtttgcgt tttcccgtct ggcaaataat tcacaagatt gctgaccgca
     6661 aactttccgc ccagattgta cgtgttcttt ttatcattca gttcgaacaa accggcacta
     6721 acattcgcat cgtaatcaga gccggaacgc cacacactcg tatttacaaa cgacacactt
     6781 gagttatgct ctaatgtttg atccaacacc aacacattgt aattcgtcag cgggtttgta
     6841 agtatttttc gttgctcttt gttattgatg ttttcaacgg ttgcatattg cgggctggtg
     6901 atggaattca aatagccaat gcctaggcca ccctgtgttc ttcctgagat ctttgttgca
     6961 tttataagtt ttgattccgt tggatttttt ataacggttt cattgctgtc gatctcatca
     7021 tagacgtcgt acatatgaat cggctcaccg ccgatgcgcc gtgaataaaa taagtcgcct
     7081 ttgctgaaga gttcggtccc ttcggtaaag aatggccggt tctcgttata cttcacttca
     7141 aaaggcgtaa gattaagtac ctggttgtcg ctttgaacct ggccgaaatc cgggataagc
     7201 gttgcgtcga gcgtgaacgc ctggttgata ccatacttta catccatgcc tccattaacc
     7261 tggctggacc agttatccaa atcaggattg ttgtatgggt aatgattggc atatacagaa
     7321 aaataaggtg agaactgcaa acgcaacggc ggtttaatgt ttgaaagtcc tttccagatc
     7381 gcttcctgcg tgagaaaacc atttacgttt ggatcgattg ggttccatgt atattgttgc
     7441 tcggttttgc ggcgcctgcg cgttatgttg aaaccccaat cctgtacgtc ttttttgcca
     7501 aatcgtatcg ccgaaaaagg aataaacatt tcaaagctcc agccgctatc agtgatgacc
     7561 gctccgctgc tccaaaccgc gttccagcta aaatcctcca tgtcagacat catacttggc
     7621 ggattcatct tggcatccca ttgttcgttg agcggcgtca caaaatattc gaatccgttt
     7681 agtttatcat tataggtgtc gaaaataatt ccgatgtaat cattcgctcc ataaccatcg
     7741 cgccctttca gctcagtaga aatgctgtct ctcgttcgtt cataacaaaa tccaccaaaa
     7801 taaattccct catcgttgta catcaggtaa gaaactgtcc tgtttgccgg atcttccaaa
     7861 gcgccaattt tcggtctgaa ttccaccagc ccggtcatta ccgctgcatc tttccatgcc
     7921 tcgtcatcca aaagaccatc gatctttatc attcctgaca tgcgctttgc ttccagaata
     7981 cgtggcgtac tattcgtttg agacaggctg caaaaagtag tcattaaaaa ggccaggaat
     8041 aatgcagcat ggattctcat gtgtagattt tattaataac gcgatcgtaa aaaaaatgtt
     8101 acaagccgat gccttcaaaa ttcgagtgac aagctccccc tcgaccgtta atttacgtga
     8161 actgtaacga tgtcctgacg agtggcaaaa aaaataaaga tcaaccagtt tgcgatgaaa
     8221 tacaaacgat tgttattcac gttatgccgt gatctggcat aattttacaa ccaacaaaat
     8281 caatgaaagg caagcaaaaa ttttttacga tcctggtatt gggattgctt tctgcaatcg
     8341 gccctttttc aatcgatatg tacctgcccg gttttcctgc cattgcagcg gcattgcaca
     8401 caacggtgcc gcaagtcgcg ctttcgttgt caagcttttt tatcggtatc tcgttcggac
     8461 aatttttgta tggaccgctg ctcgaccgct ttggccgcag gcctccgttg tacgcaggga
     8521 tcagtttata ttttcttgct tcgttatggt gcgtcttcgc cacgtctgtg catatgctga
     8581 tcgtgttaag gttattccag gggttgggcg gttgcgttgg aatggtcgcc gctcgcgctt
     8641 atgtgcgcga tattttccct gtgcacgaaa ttgcaaagat attttcgctg ctcatgcttg
     8701 tgatcgccgt gtcgccgatc gttgcaccca cgtcgggcgg ttatgtgaca gcacatcttg
     8761 gctggcagta tatttttgtt gtgttgaccg ttttttccgc tttgatcctg gcgctcatgc
     8821 attttgtttt accagccggc agaccagcgg ataaaagttt atcgttgaaa ccgaaaccca
     8881 tcgtcagaag ttttttggcg gtgtttaaaa atccacaatt ccttacttat gcactcacgg
     8941 ggtccatcgc agcttcaggt ttgtacgcat acgtgtctgg ctcggcatat gtgttcatgc
     9001 agttgtataa agtgactgaa cagcaatttg gatggatctt cgccatcatt gctgcaggac
     9061 tgatcgcatc aagccaggtg aacagcctct tgctgcgaaa ttttgaaagc agtgaaatca
     9121 ttcgcgtcgc cttgctctgc caggcgataa ccgggatcat tctacttctt ggcgctgtat
     9181 tcaatatctg gaatgtttac gcaatgatca tcggcatatt catctttcta tgctgccagg
     9241 gatttacatt tccaaatgcg tcagctctgt gtttggcacc cttcagcaaa aatgcaggca
     9301 cggcgtcggc gctcatgggc ggaattcaaa tgatcaccgg aacgctttct tcggcgttgg
     9361 tgagtgtact ggcaaacggc acttcattgc ctatgaccgc agtaatgggt ggctgctctt
     9421 tatctgcatt tttaatttta atgattgggc aaaaaaagat cggctataga accgaactga
     9481 aagaagtcga agagaaggag ttcgtttatt agtttattgg tttattaggc tattgggtga
     9541 ttagtcgacc caatgtccca attacccaat atcccattat cttaatgctt cagcggccgc
     9601 ttttttatca ttcctcctct cgtatctcta atactgctca ttacaataaa agcattcctg
     9661 tctatttttt cgatctcgtt gttcagctta ctgagttcaa gacgagtgat cacggtaaat
     9721 atgatatcgc gttctttcac ttcgccgctt tttccatatc cgcgcttgcc cgtgtacact
     9781 gtgactcctc tgcccatcac atcgatgatc atttgcctga tttgctctgt gtgcactgaa
     9841 attatcgtga cacccatgta ctcttcaatt ccttctatta cgaaatccaa agttcttgac
     9901 gcagcgagat aagtgattat cgaatacaaa gcagtgtcaa cggaaagtaa ataagccgcg
     9961 acggaaaata ctacaatgtt gacgagtatg atgatgtcgc cgatggttgt ttgcaatttc
    10021 ctgctcaaga aaatcgccag tacttccgtt ccatccatta cagcgccgcc acggatcgaa
    10081 aggcctatac cggcgcccaa aaaaaatccg ccaaaaaccg ataccagcag tttctcatcc
    10141 gtcacatcag ggaattgaac aagagccacg caaacagcga gccctgttat agcgagcatt
    10201 gttcgtatcg cgaactgctt tccgatagcc ttatacccca gcaacacgaa cggaatgttc
    10261 accagcagta gcaggatcga aatagaaacg ccgcttacct cggcgatcaa cagtgagata
    10321 ccggtcgctc cgccatcaat gaagttgttt ggaagaagaa aacctttgag cccaaatgca
    10381 gcggagaaga ttcccgccgt gacgaaaaag aaactcctgg tattgttcca aatatcgcgt
    10441 cgaagctgct ttatctgctt tgcaatgcga tatcggctat atggttcttt ttttgaacgc
    10501 ctgtgatcat gaacgactat ttttctgagc agtttcttca tgcaaattga aacagtttca
    10561 tctgcttcaa atctaatgtt ttctatgctc attaaaactg acgggcggca ctgagaaagt
    10621 tagagctgcg cagaggcttt tatgccttac tttattgttg ttgatcgagc ttatcaagcc
    10681 agtacgctgc tgttgagtcg ccctcgatgg cggcctccat caacaaatga gcgccacgat
    10741 aaacatcctt tgtgaaaaca caacgcgcat agtaactatg ttctttcatt aactggtcgt
    10801 cattcgcgaa ggaatacaaa aatccaagag ctgtcttggc cgggaggtaa tctctttcgc
    10861 ttgccttcgt cagaaggtca aacgcctcac tacagttgat ctttgagttt ttattctgca
    10921 gcgcgaggtt cgcatattga aacatcgcct gcggaacgtt ttgttgtacg agttgttgat
    10981 agacatccaa tgcttcgtct ttcctgtttt cacgcagaag ctgcttcgca ttctcgagtt
    11041 gcacagtgat cgcattttgc tcttcttcgg ttagctttgt tacagtatca gccttgatca
    11101 aggtcttgtt ttgtgagctg ccgggctgct tcgttccgtt aaccatcgca aacacaaaaa
    11161 cgatcaggac aaataatccg agtacaaccc aaaaaaatgt tttgccggaa aaatattttt
    11221 ttttagtcgg ctgcgttgcg ttttttacac ctggttcgcc atcctgaatt aaagtggaat
    11281 ttgtttttat cgaaattgca tcacctttct tcgcctgttt gcgatagcga aataattctt
    11341 cctgcatttc ccggttttcg cgcagcaatc gtttattttc ttcttccagc aagctcactt
    11401 gttcgctgct gtttgctttt gcagcagtcc acacattgtt ttgacagata taatcatgca
    11461 aggccattcc gctcgcgaag cgcgccgccg gttttttttc aagacaacgg tacaccatgc
    11521 tgaacatcca ttccggtacc tgcatctccg cttctttttt tgagtcgctc catcgtgcag
    11581 gcaaggcttt tccccttaag gaaaaaagat ttggcggagg cgtctccatg tgcgcaagca
    11641 tcacggcatt tcgtgcggtc tctcccttat ctcttaacgg aaatgggaca atacccgcga
    11701 gcaactcgaa cataataacg ccaaaactgt acacgtcagt ttcaaaatac attcggccct
    11761 cattctgttc aggagccatg aattcaatag cgcccgcatg tctcaggctt gtgcgccttt
    11821 cctcatcact cataatggca agtccgaaat caagcaaaac ataattgccc gtgtgcaggt
    11881 tgaattttac attattgctt tttatatcgc catgtttcac attcgcgcga tggcaatgtg
    11941 ccaatgcgtt ggataaatga tcagcgactt tcaaagtttc tttgatggtg aagatcgagt
    12001 cgtttggtgg ccttagtaat tcttccaggt caggaccttc aataaattcc atttcaatga
    12061 aaggaaaatt tccagtctct gtgatcccgg aactcagaat ttttacgacg ttggggttcg
    12121 gctcttcgtt tactttctta agcttctgaa cttcattttg aaaatgtgta aaattcttat
    12181 catcacctgt ctcgctgtag attggtgttg gcaacaattt gatagcagta ataatttcgc
    12241 caacgcggcg ccctttgtaa acggatccct ggccgccggt tttcagcgca cccatatttt
    12301 ccaaacccgt tgttattgta aagatccggc tcatttcagc gatgggttgt cttcttccac
    12361 atagccaaat tgaattaaag cagactcgcc cagtataacc tggtccccct catgaagctg
    12421 atatcctatt tcagttgtaa gcaactttac aagattcccg tcggcggtac gcactttgat
    12481 tttattcaat ggcggaattc ctccgtcgtc agcaaataaa aaaaatgctg aagcatcttc
    12541 gttccattca atgtgtgcat gttggcggct gatcgacctg ttgcttttat tagcgctgtt
    12601 gccaggaaac gcaatttcgt tttcgcgata aaacccgtca ggtgtatgca ctttattttc
    12661 tcttccaata ttgatcttcc tggttgatga atgaataata tagctttcgt gttccgcttc
    12721 gccttccagc acctttatta aggctgatct ttccttatga atggcacgtc gtttttcggt
    12781 tgatatgaac aatgcaatat ctgcatcact tgcggcaatt gcctccggcg gagcttccgg
    12841 ggcaaagacg atgtccatgc tccactgctc tggtaacgca atggcaaaat cgtcagcaat
    12901 tttctgtacc tcttcttctt tgaaccggtc ttcctgctcg agatataccg cagaagcgta
    12961 aatatatttc tcgctttccg ggcatgtaat atataattgc aggccgcgga tattgctgcc
    13021 ttcaccactc tctgtttttt tcaattggtc ttttataaaa tcgagaatgt agctgcggag
    13081 aagctttaca tcttttgttt tctgctgttt gaatagatcg agcatagtat gttcagttaa
    13141 gaagaaacgc tttttatgcc ttaatagggg aattatttgt ttaaaacatt caataaacag
    13201 tccaaatttc gttgctttag atcagatgtt caacgcgttg aatccgccaa cctggctata
    13261 ttaacagaat catttattaa aacaggcctg tcattggttt tattgatagg tctcttttgt
    13321 ttagtttcat tttcaaagcc tttgatataa ccgagctgtt gcaacaccgg gaccacatgc
    13381 ttacccgcga gcttaaccgc aacactcgag cctttacaat tctcgatcct tatacaggtg
    13441 actatgtgac caggacccgt tggttttggg gcaaagaaca cataccatcc atcgtttatt
    13501 ctttcattct tgagtattcg ttccggcgtg cccgttttgc ccgcgactgc aattcccaat
    13561 tttgagacct tcgacgcgct ctgttctttc atatactgtg tcatcagttt tgcgtatgcg
    13621 gaatcgtttg caagcggaac tcctttatta atggctgaag ggcggccatt gacggacatt
    13681 acaaaacgat ttgggaccat cattccgttg tttgcaattc cagccgcgat gcgtgcgacg
    13741 gatgcagggg ttgcgatcaa ttcgccctgg ccccaggcca tgcctgaaac tcctctgccc
    13801 ctcgttctcc tgatgttgtt tggatcataa tgctttacac tcgtgaattc ggtttttctc
    13861 catagttctc tccattcatt ttgttgttca atgttggtgc catcgtagct gtagtaataa
    13921 cctcccactc catgaaggaa catgcccgat tttaaataga gcgtgcccat ttcttcctgt
    13981 aattgttcct ggttagcgag ccggataaag aaagagttat ttgatcgtac gatcgctcgt
    14041 tcgatggtga tgttgcctgc ttcgtcaggc tcaggtccgg ttgtcctgat gagatcccat
    14101 ggatgaacga caataatttt tttcgcagca tcgataccaa gtttgttgaa tgctgcgaga
    14161 gctgtgatca tttttgcggt cgagcccggc tgcgttgcta tcgtgaatcc aaggtcattg
    14221 tcggttatcc aatatggcaa cttattttgt tgaatcggcg tgaggttcaa catatcccaa
    14281 tcatcaacag gcggtaaagg atatgtcgcc gaggcaagta cgtcgccggt attatcttcc
    14341 atcaccacga tcgatatcct gttgttcacg agggaatcat ctgtttgtaa agaattttga
    14401 agccgcgttt gaagcgacgc gtccacggtc aattgtacat ctcggtttcg ttgcctgaat
    14461 tcctgcactt ctttactgtt gatcccggca agcagtaacg gcgccagcgc gctatagtcc
    14521 cgttttacta ccgtcatctc aactgaagtt tgcggaagaa acttatcttc cttaaatcgt
    14581 gttgcactga cggtgtactt ggtggcaggt atcgggaagc cgcgcatttc cggagcctgc
    14641 gcatattccg caaaataacc attcggagct ccgttaaaaa cgttggtgtt tgcatcgccg
    14701 gtccagaaaa acatttgctg cgagaaagga taataacggt cgagccgttt atagaaaagt
    14761 tcatcgatgt cgctttgttc tatcccaagt gcgtgcaggg aatcgatttc cttgttaatg
    14821 ctttccgggt gacttgtcgc gagaataagg cctttcctgt ccaataaatc gcctgcctgc
    14881 agcctgttta tcaaaatgct gatacgcggg ttgtaactaa acattcttcc accactcctg
    14941 tcggcaacca acgcaggctg caccacccat ttttcgttgt taaacaaata acgcgagaca
    15001 ttgatcgaaa gcaacacgat tcccatacag gcagccatta atgcaggaat taaattttta
    15061 tcttgttgta acgagatata tttcatctgt ggcggtgaac cttctatgtg cgacgcggac
    15121 aaaagaaatc ctgcagccag catatttgcg atcaacgacg agccgccgta actcatgaac
    15181 ggcaacgcaa cacccgacaa tggaagggca cctgttgagc cgccggctat aagcaggaac
    15241 tgaacaaagc tcgctacacc gatgcctgca cacacataaa ataaaaacgg tcggcctgta
    15301 tgcctgccga ttataatgga acggtgcaga tatatcaaaa acaaaataaa cacagcaaca
    15361 atgcctgccc atccaaactc ttcacccatt gatggaagga tcatatcagt gtgcgcttca
    15421 gggatcgttt ttgcaaaacc ttcgcctgca ccttgacccg tcacgccgcc actgctcatc
    15481 gcccaaattc cgttcgcgac ctggtcgccg ccaaacacct cgttgttcca tgcatcctgc
    15541 caaattgctt ttctatcgat cagccgttgc atcgggccgg gaaaatactg cgccatgtag
    15601 ggaatcttgt caagcaacaa gaacgcagcg attaacacca gtgccataag cgttgattcg
    15661 ctcagctttt tctttgccag caaagtgtat agaatcagca cgcctgcaac gatgcccgtt
    15721 gccatccaaa catctttcag gatccaaacg gcaagcacgt ataagacaac agcgcccgcc
    15781 atgtgaatga aatcgcctct cgaaaatgaa aaaaggataa taaatgtaaa gcaacacacc
    15841 attgcgggac cgaggtctcc gaggatcagg aagagaaaga tcgtggtaag gatcgcaacg
    15901 agtgcgaata tgaaaaaata ccagcggcgt gtccaggaat tatatgcgga aataaatttt
    15961 tcgttcgtgg caaagaagcc ggctagaaag atcacgataa gatatttgac gatctcactt
    16021 ggctgaaaac cgaacaaatt cactttaacg ccgctgcctt cagggccagt tccgaataag
    16081 atcgtcagag caagaagtcc ggtagcaata acggcccacg gccatcccgt tccggcgagt
    16141 ttcattcgtt taaacaggaa cacacgatac agagacgaat cggtggtgaa acgccgaagg
    16201 tcgaacaaca ttaaaaggat aattcccgca acaccagagg cgaaataaaa caaagtactt
    16261 tttgcaagaa accagtcccg gagcggatcc tgcaaactta agagtgtgag aaacgacaag
    16321 ccggtaagta acatcaccac ggggagtatt aactggtcgg cttctttaaa gcgaatactt
    16381 agtaaaagat gtattatgat gaagccggca aaaaaagctg cgacgattat ccaataccat
    16441 tgcttcacat attcaggcgt tctgacgatc agcgcttttt ctttcttcag tgtgttgaaa
    16501 tcttttgttg aaaaaagttt cagcgaatgc ggtgcctggt aaaaactaaa cgcaacgttt
    16561 tgtttcagtt ctgatgttcc ctgcgagtta ccaaagctaa atccgggttg caggggcaac
    16621 acttcatatg ctctgttatc cggtaaacca ataaaagaaa aattgcctgc tgcatccgtt
    16681 tgcacatacg ccgtcaacga ttgaagctgt gtgtttttaa gggagtcgac agcatataat
    16741 tttctcacgg tggttgtgtt atcaaccagt tctcccgcga cttcttccac tttattgctg
    16801 tatacgctgt cctgtggaag gatcagttga gcacgaacga caacatttgg aaccggttgc
    16861 cctgcacccg ttctaacgac gccgccgatg ttgaagcggc ccatactcaa attatttgtc
    16921 gcgggaactg cagccggatt ttttttcaag tccgcaaaca agatcgaatc ctcatcggtg
    16981 aagccaagga tgatcctttc tgcggccact cttttcttaa acgattcgcc cccgtgcaga
    17041 agagcagtgt tctcatctac gttataattt ttcttgttca ggtcgccaat gttatcgatc
    17101 gaccctgtgt cggcaagcct cgctttttca aatgttgaac tgatgagatc aatgtctttt
    17161 ccatcgcggt aataacggcc tttttgtaac aacgttctca tcgcctggcc gggctttgga
    17221 tcgttcagat tcatcatcgt tccgttagac aaacgggcag gcacatcggc aaaatctcca
    17281 ctgatgaccg tgtatagttt ataaaacagt accgccatca ccactgttat cagtaataaa
    17341 aaaattcttt ccgtgtttct atttacgcgc ttttgagtct tcgcagccat ctgtgttaat
    17401 gcttgacttg ttgtgaatca ggataagaaa atgaaccgtc ttccaatttg ccgctgacag
    17461 atttatcgtt gggcaaatga atttgatgcg ctaccggaat atcgcaattt gtaaaccgca
    17521 cgtttttgag gtgaagtgcc gtattgtgta caataaaacc ggtagcgaaa ttttctagta
    17581 ccaggctatc gatcaaaata tatttacagt tttgtggcag cataaaagca gcaccgcggt
    17641 aatttgaatc agcaataatt ttgatcccgc cgccgtgtat tgtgagtgag tcgcgtgtga
    17701 tggcgatgga atcatgtaaa taaatcggtt gactgaaaat gcggctcaga tatatttctt
    17761 ttgctaccgg cctgttgatg ctgtcagata attttattcc cgccgtatca acattgtgca
    17821 ccgttgcagg cgcaggcatt acagcttttg gttttctgag gtaatcatga tacacgaacc
    17881 atgacaacgc tgccagcgat aaaaacaaca atatggccag gatgacaaca gcgcttcttc
    17941 ttccacgcgg ttgaatttcc tccgtatcat cgaccggtat ctccggctcg tttcttaccg
    18001 ccggctcttg ctcctggact tctttttttt ttgcggcagg acgcgtggct gtaagactag
    18061 gtcttagttt gtcattttct acgaggacaa ccgttatgtt gtctttgcct cctgcatcat
    18121 tcgccgcacc gatcaatgac ctgcatttgt ctttcagcga ttggtcactg cttaaaattg
    18181 aagtgatgac tttattgctt agcatatcgc ttaagccatc gctgcataat aaaataatat
    18241 ctccgggcag aaaaggcgac tcacccgttt caatataacc aggttgggaa aactccactt
    18301 ggtcgaagcc cagcgctttg tttatctcat tgcgtttcgg atgatgcatt gccgcctctt
    18361 ccgataaacg tccgctgtct tcaagaaagc cgacaaatga gtgatcatgt gttactttca
    18421 caagagaatc atctctgaac aggtacaatc ttgtatcacc cacatgagca tagtaaaact
    18481 tgttttcaga aatgtctgcg agagcgagag ttagtacgca ggccatttgg ccattctgcc
    18541 cggtaatgtg tttttcttta taaatttttt catttgcggc gacaaatgat tttttcagtg
    18601 ttcccgtaac atcctcaaaa ggatctttca gatgatccag tatcgcttcg cgtgccaatg
    18661 ttgccgcgat ctcgccgcct tcatatccgc ccactccgtc aataacacac gctgctatgt
    18721 agcggtcatg caaaacgttt tcagcaatga atgcgtcctc attgttgtcc cgcattttgc
    18781 cggtgtcagt gatgccataa aaattttcag ccattcctgt gtgttttctt tacatccctg
    18841 aaattggcga caagcaacag gaggcatatc aacaacactg acaatgacag gatcatattt
    18901 tccatgctca cgatttaaaa atgtttaccc caactatgcc attcaaaaca atgcgcgaat
    18961 tgatcggtaa ttgcacccac gacggatcgt tcacatcact caactcgatc tcattttcat
    19021 ttacgatcgt cttttcacca aaggatgcca ggtaaaattt attgtctgat ttatcaaatc
    19081 gtatgcgtaa gtgcggcgtg ttaacccaat ctgaaggaat tcggaaaatg tttggtttgt
    19141 caccagtttc atctttaccg gaaacgagga tatctttttc tctcatgtag tattctagtt
    19201 tttttccggc aaactcttta tcaggaataa ttgtttccag ccgcgcaaac actgttgtgt
    19261 cggaagctga aagttcttta tcgtccgtag caaaattttc gtcgtatggc acttcgtaat
    19321 atccttcgct gtaaaatgtg aacccttgca ggatctcggg gtttacgtca aaagtttctg
    19381 ctatccctgt ttggcggggt atgaacgtaa tgcgcacgtt ttcctctttc tgttgctggc
    19441 cacccggcat aagcttccca atgaggcttt tatcaccacg ctggtattcc gggtgtgaaa
    19501 caaaacggaa aacccattta ttacttgcag gcgaaacggt tttgccctgc aatttatact
    19561 ggcttaaaat attgtagaat tgtttgaccg attcctgcac gatgagccca aaaatgcctt
    19621 tcttattttg cgtgaattga ttatagtctt cttcattaaa acaaacgatg tattcatgat
    19681 aaaacactac cctgttggca aacgataact cgcgtacaga tgcttcaaac ttttgcaaaa
    19741 caaatttgta tacatcgtcg ggggtgagaa tgggtggctc tgtcaatgta ctgtcagctt
    19801 cccgcttgag aaaccattca tgaaagccca ttcgctgcca gaaggaagtt ttcgttttca
    19861 tgcgaactat taatgttttt ttccaaaaag ccttttgaaa aaacccggtt ttttttcaga
    19921 tttattattc tcagaattgt tcgctgttga tggagtaaca gatttggctt ttgtcgccgg
    19981 ttttctttct gacaccacaa tggcttctgc tgtgttactg tcaatacttg gaacatcgag
    20041 taagtatcca ccgtatctat taatatgaac ctcgttactg tcccaggggt tggcaacccg
    20101 gctgtaaatg atctcttttc tcccaagtgt aggggcaccg gcatcgcctt tcttataaag
    20161 tgtatcccat gttcttcccc cattaagtga gtagatgtac ctgctgttcg aaacatcata
    20221 ataaacattc cgggcgggat agtaatagaa ttcaaatgcc ggatcattgt gcgcgttagt
    20281 gcaggccaaa gcagttgaag aacatacgcc tgcaataagg atcttacaca acaaggtaat
    20341 gcgcattgct ttttactgta ttatccaaag accgttccag taaaaacgta aatgatgcga
    20401 ataacttatc tgattgcaac acgtttgctg ttacaggaaa cataatttta cggccaggca
    20461 agccaggccg catttcgcgg gcgcaatgtt tatattggat gagcgttcct cacgacgtta
    20521 tttcaaaatc ttagtggtcg atacttcttt cccattttcg tctacaagct ttaaaaaata
    20581 tacgcccgag gcatacgaat ccatccgaat tgtaaaagtt tgtgttgatt gcgaaactga
    20641 aactcttccc tgtgtaacga gcttgccgat catatcgaac agcgcatatt catactcaga
    20701 gccggcggca ttttcaagct tcactgtcag cgtgccattg ggaacaggat ttggatacac
    20761 agtgacaatc gttgtaggcg tttgtgaaga gctgtcgcta ttgaacttaa cactgaaaga
    20821 agccttcgtg tttcttaaac catcgaaata caaaaggtat ttatggtttt gctgaaggcc
    20881 gctaatacta atttcacgat cgctgttaaa actaagacac gcgccgggtt gcggatagtt
    20941 ctgcccgtcc ggacaactgg atacatcgta caccgccaat ctcactcctt gtccattaca
    21001 ggaacttagc gcaggagggg tagtcgtata gtcggagacc gtcagcgtta agtcggttct
    21061 tgtcccactc atgaaggcat aataagcatt gttggtaaca gaggtgccgg tgttttggca
    21121 gtttacctgt gtaaaagcag gatcagcaaa tttgttacta gtggcatgcg tcagatcgaa
    21181 gatcacagtt gtattaggcg cgatcggtga agccgggaaa gacgaagggc attcatcgtt
    21241 tggcggcaca tttcgcgaga gcggactcat ctcactcgta aataatccgc aactaccata
    21301 tgaatttccc tgcggtgtag tcgtgtacaa tgcgccctgg taagcagatg cgtcgggcga
    21361 tcttctgtca acaaaatcaa gaatagcata atgcatgagt tttgaaggat tgacagtatt
    21421 gtagtttccg cctgcgccgc cttcataatc atcattgata tgactcaggt tcaaagcgtg
    21481 gccaagttca tgaaggatga tcatttcgag atcataagag ccaacattcg ggaaacacgg
    21541 gccttcttca aacgatacat cggcgccaag tgacacacca ttgttcctga tcaaaatatc
    21601 aaaacccgtt ttttgaggag taagcaatgt ttgtcctgat tgacaggcgg agaaccaact
    21661 atatgttgtc tccagtactc cggcagccat ttggtcgacg ccggtattat tgttatcata
    21721 taagacaagg tttacgtcat cgtcggcgac tgactgcagg tcagtggcag cgccctgcgt
    21781 taagttcgca cctacaattt ctttccaggt agccaccgca cgttcaaacg tttgcttcgc
    21841 aggcgacgtg gtgaaatcaa cgccgccgcc cttcgtgctg ttactgtact ggtaggtata
    21901 tccgcccgat ccgttagtat tcatcaggcg aggctcgcct actttgttca catctaccgc
    21961 aacggtgaat tgcgcatcga gcacagcgaa aaaaaccttt aaatcagacg gtgaacttac
    22021 tgacgttccg ttgctcaata caaccgcaaa gagaccggtg cctgcgcggt cggggacgtt
    22081 tacaactatc ttgctatcgg tccatgaaat tatatatggc gagttaaatg aaattttata
    22141 atcgggcgtt acgtgcgcat tgttagcatc tttgaaatta atgcccgccg agccggacgg
    22201 gctgctgcca aaaccagagc cattgatcgt aagtacattg ttcgccggat cgtttaatgc
    22261 gcctgcgtga acagtggttg gcgagaatga cgtgatcgtc gcaagcgtgc cgcccactcc
    22321 attactgcta acgccggcgt gcattatgtt gaaagatgtg tcaatgatct tttctgcaag
    22381 cccggttttt tgtttcacca cccggtacag cgtcgactca atatcatcat actccgcaaa
    22441 aggtgcgtac gcgtgatgat tttctaaatt gtatcgaagg aagccctggt cgctgctgaa
    22501 gacatcatac aaaatgttgt ttgtaaacgg cgaccttaaa ttattctgat gttgcaaaca
    22561 gaagaacata ccaacatcgc cctttctcag ttccaaaaga tcgcttacca ctaaagcttt
    22621 tccgcccacg ttgcctccct gcgttatcac ttccacctgc ttcgaaacca agtttccttt
    22681 aaacagctta aacacttgta ccgtatttga agtatagatg agagtatgtt gctgattcca
    22741 gaaagagcgc tggtcaatta cctgcccttc aacgatgagc gatgcattac cgattttttg
    22801 atcgagggtt atcttataaa gctgggcatt tgccgcattg aagcaccata tcaaacaaag
    22861 gcaacaggct gcattacgga tcagtttcat tcggtttgtt ttatacagac aattaaatat
    22921 acgactgaac gctttatttg ttgttttgaa gagtcatgaa attcatgatt aaacatacta
    22981 aaaactaaaa aggctgcctg aaaagacagc ctcctgagcg aatattttgg tttaccattt
    23041 atcaacttcc tcgggagcag tgtcagtacc cggaacgttt gccacaacgt tctcaacaac
    23101 aacattttcc tcaacatcct ctacaacgtt ttctacttcc atttcaattt cggttccatc
    23161 gattgcaggt gctgcatcgg tatattcatg gttatacgaa tcgaaatcaa aatcaggcat
    23221 taattcggtt ttcacataat caactgcctc gttcaacgct ttgataaact tattgaaatc
    23281 ttctttataa agaaaaagct tgtgcctgtc gtaacctccg tcattgaagc gtttacggct
    23341 ttctgtaata gtgagatagt aatcattgcc gcgtgtagcc cttacatcaa aaaaatatgt
    23401 cctccttttc cccgctttga tgcgtttact gtaaacactc tccattttct tgtcgttatt
    23461 ttcgtacgcc acttttgatt tgttttggtg aataatgtta cttgcttcaa gagcaaatat
    23521 aatattgttt tacaattacc aaaattttgg cagattttgc cgaaaattaa ttcacggtcg
    23581 cttcttcgct caattgcaag ttgtaaagtt cagcataata cccgtcgcgc gagagtaatt
    23641 cggcgtgagt tccggtctct actatttctc cctcatcaag aatgatgatc ttgtcaaaag
    23701 ggatcgacaa gagtattctg tgggtgatga tgatcgttgt tttattgcgc aaaaattcgt
    23761 tcaggttgtt tacgatcata ttttcagttt tcgcgtcaac ggcgctgaga cagtcatcga
    23821 acagcatgat agatccattt ttcaacaacg ctcttgctat ggacacgcgt tgcttttgac
    23881 cgccgcttaa ggtaacgccc ctttctccaa ccgtagtttg ataacccttg tccagcgata
    23941 atatctcatt gtgtatcgcc gcatatttag cgaattgctc aatttcttct tcactctgtc
    24001 cgcgcattcc gaatcgaata ttgtttgcaa ctgtatcgct gaacagaaac acatcctggg
    24061 gtacatagct tatgtaattc cgcaggtctt tcagtgaaac aaacctgatg ttctgatcgc
    24121 ctaccacgat ttgtcctctg cccggatcat aaaaacgcag caacaactgg gcgatcgtgg
    24181 atttgccgct gcccgttttc ccaagtatca tcaccttctc tcctgtcctt acatggaagg
    24241 agatgttttt tagagcctgt atgcctgtgt tcggataggt gaacgaaaca ttttcaaaaa
    24301 tgatatcacc ctgcagcggc gcgtgttttt gtccggcctt caccgggtca attattacag
    24361 gcttcgtgtg aagaaactcg ttgatccgtt tctgtgacgc ggctgctctc tgcaccatac
    24421 ttgccacact gcctat
//
LOCUS       DASQJI010000321         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1110218,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000321 DASQJI010000000
VERSION     DASQJI010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110218"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(293..1660)
                     /gene="mnmE"
                     /locus_tag="VEV83_09020"
     CDS             complement(293..1660)
                     /gene="mnmE"
                     /locus_tag="VEV83_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HYK45296.1"
                     /translation="MSSWSDTIVAIATPPGIGAIGIVRLSGMHAIDIIDELFSGKKLS
                     EQPSHTLHVGFLKDDNIMIDEVVVSLYKAPRSYTGEDVVEISCHGSSFIQQQIITACV
                     RNGARLARPGEFTQRAFLNGKLDLTQAEAVADLIASNTEASRKTALQNMRGGFSSVLK
                     QLREQLIQFSALIELELDFSQEDVEFADRTRLNKLITDAQKVTNELLQSFRLGNVIRN
                     GVQVAIIGKPNAGKSTLLNTLLNENRAIVSEIAGTTRDTVEEVINIDGILFRLIDTAG
                     IRSSADTIEIIGVERSMEKMRISDIVVYLFDCTIETKENLLAEQTKLMSNQKEFIFVG
                     NKEDLANDEDLAATFAGIDVLFISARDHTHVDLLKKELVNKVIKGSVDTENIIITNAR
                     HYEALQQVATSLTDIKKGLDEKIPGDLVALDIRSCLHYLGEITGEISNEDMLNYIFSK
                     FCIGK"
BASE COUNT          435 a          399 c          335 g          526 t
ORIGIN      
        1 ttgcccacta ttgcaaaatc cgccatatca tttatatctt ttacatgttc acaccggcta
       61 gccttgttgt tttcaaaata caccttgtaa ttcataatcc gaattttgtg cgaaagtaaa
      121 ctaattaaac cttgagtgtt cagaagaatt aaaaccgctc ccagatcgaa cgttaacatt
      181 ccgataccaa tgttgaaatg tcattgttta agtgtatacc gacgaccgca agcttggcgg
      241 ctaaaagact tcaaaaatgc cgtattacta acttgtcaaa ctttttggtg cgttactttc
      301 cgatacaaaa cttactaaag atgtaattga gcatatcctc gttgctaatc tcacccgtga
      361 tctcaccgag ataatgtaaa cagcttcgta tgtcaagtgc gacaagatcg ccgggaatct
      421 tttcgtccaa tccttttttt atatcggtga gtgaagtggc aacttgttgc agcgcctcat
      481 aatgccttgc attggtgatg atgatgtttt cagtatcaac acttcctttt atgactttat
      541 tgacgagctc ctttttcaac aggtcgacat gcgtgtgatc gcgggctgaa ataaacaaga
      601 catcgatgcc tgcgaaagtc gccgcaagat cttcgtcatt cgccaggtct tctttgttac
      661 ccacgaaaat gaattctttt tggttcgaca tcagtttcgt ttgttccgca agtaagtttt
      721 cttttgtctc gatcgtgcaa tcaaacaggt aaacgacaat gtcactaatc cgcatttttt
      781 ccatacttct ctccacacca ataatttcaa ttgtatctgc gctgctgcga atgcccgccg
      841 tatcgatcaa acgaaataat atcccatcta tgtttattac ctcttccact gtgtctcttg
      901 ttgtgccggc aatctcgctg acgatcgcgc gattctcatt caacaaggta ttcagcaaag
      961 tggatttccc tgcattcggt ttccctatga tcgccacttg cacaccgtta cgaattacgt
     1021 taccaagcct aaaggactgg agcagttcgt ttgtgacttt ttgggcgtct gtgatcagct
     1081 tatttaatcg tgtgcggtcg gcgaactcaa catcttcctg tgaaaaatca agctcgagtt
     1141 caattaatgc tgaaaattga attaactgtt cgcgcaattg tttcagcaca cttgaaaatc
     1201 cgccacgcat attttgtaac gcagttttgc gacttgcttc cgtattactc gcaatgagat
     1261 cggcgacagc ttctgcttgt gtaagatcaa gcttcccgtt aagaaaagcg cgttgtgtga
     1321 attcgcccgg ccttgccagc cgtgcgccat ttcgtacgca tgcagttata atttgttgtt
     1381 ggatgaacga agagccatga cacgaaattt caaccacatc ctcgcccgta tatgagcgcg
     1441 gtgccttata gagggatacg acgacttcat cgatcattat gttatcatct tttagaaagc
     1501 cgacatggag cgtatgagac ggttgttcgc tcaatttctt tccgctaaac aattcgtcga
     1561 tgatgtcgat agcgtgcatt ccgcttaagc gcacaatacc aatggcgcca atccctggcg
     1621 gtgttgcaat cgcaacgatc gtatcgctcc agcttgacat gaacgtgttt gctcaaaagt
     1681 aggattcatt ttctt
//
LOCUS       DASQJI010000322         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2800831,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000322 DASQJI010000000
VERSION     DASQJI010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2800831"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VEV83_09025"
     CDS             complement(<1..537)
                     /locus_tag="VEV83_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45297.1"
                     /translation="MLKYITRTIWILSLVSLFTDTASEMLYPVMPVFLKSIGFSVLLI
                     GVLEGLAEATAGISKGYFGKLSDNINSRVPFVRIGYTLSAISKPMMAFFIYPIWIFLA
                     RTIDRLGKGIRTGARDAILSDEATPATKGKVFGFHRAMDTVGAVLGPAFALMYLYYHP
                     KNYATLFYLAFIPGVLALL"
     gene            complement(808..1194)
                     /locus_tag="VEV83_09030"
     CDS             complement(808..1194)
                     /locus_tag="VEV83_09030"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK45298.1"
                     /translation="MPPDLSQNKKNAVEFYDLMFNQCKPREAIDKYAGDVYIQHNPHV
                     GDGKEAFVQYFERMAIEYPGKEVFFKKIIAEDHFVVLHCQQVWPGDDEYAGIDIFRFD
                     DNGKIVEHWDVLQVVPLESKNNNTMF"
     gene            1766..>2387
                     /locus_tag="VEV83_09035"
     CDS             1766..>2387
                     /locus_tag="VEV83_09035"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HYK45299.1"
                     /translation="MWFRRDLRLHDNAALYHALTHDFPVIPIFIFDKNILDDLEDKHD
                     RRVEFIREAVVDMQEELEKHGSSFKGFYDTPAGAFKELLKNYSLKKVFANEDYEQYAI
                     DRDKEIASLLKEHKTELKLYKDQVVFSKNEILKEDGHPYTVFTPYSKKWLAKLNEFYL
                     EPYPTKKYFKNFYQQPPHRIPSLDSMEFKKVGRPFPSKEIDEDLIRN"
BASE COUNT          675 a          565 c          504 g          643 t
ORIGIN      
        1 aagcaaggca agcacgcccg gaataaaggc gagatagaaa agcgttgcgt aatttttcgg
       61 atggtaatac aaatacatta atgcgaatgc tggaccgagg acagcaccga ccgtatccat
      121 cgcgcgatga aatccgaaaa cctttccttt cgtcgcaggc gtagcttcat ctgagaggat
      181 cgcgtcccgt gcgcctgtgc ggatcccttt tcccaaccgg tcgatggttc gcgccaaaaa
      241 gatccatatg gggtaaatga aaaatgccat catcggcttc gagatggcac ttaatgtgta
      301 gccaatccgc acaaatggaa cgcggctgtt gatgttgtct gacaattttc caaaatatcc
      361 cttgctaatg ccggcagttg cctccgccaa cccttcaagc actccgatga gtaatacgga
      421 gaaaccaatg ctcttcaaaa agaccggcat caccggataa agcatttcac tcgccgtatc
      481 tgtgaacagg ctaacgagcg ataagatcca tatcgttctt gtgatgtatt tcaacattga
      541 gttttcaagt ggttattcaa cgatacaaat ttctcacagg ctgcgaaggt ccaagccctt
      601 tctttgtacg tcattcccgg ccccgaccgg gaatctcgct ctacggagcg cgtgatcgtc
      661 acagattcat ctttattcac caaacgtatc aaaccaacgg agcacggcgt tgcagttcct
      721 cgttcggaaa atcacatccc ttctgagtca tgttcatcac gcggaagaca aaggcctggt
      781 tcgttcgcga gagaagcagc gcaacgctca aaacatcgta ttgttattct ttgattccag
      841 cggcaccacc tgcagtacat cccaatgttc tacgatcttt ccgttatcat caaagcgaaa
      901 aatatcgatc cctgcatatt catcgtcgcc cggccacacc tgctggcaat gcaacacgac
      961 aaagtggtct tcggcaatta tttttttaaa aaagacttcc ttacccggat attcaattgc
     1021 cattctctcg aaatattgca caaacgcttc tttgccatcg ccaacgtgcg ggttatgctg
     1081 gatgtaaaca tcacccgcgt atttgtcgat cgcttcgcgc ggtttgcatt gattgaacat
     1141 gaggtcgtaa aattctactg catttttctt gttctgagaa agatccggcg gcatgagaaa
     1201 ttttgttgga aagataagct tgaatcggtt aatcgaccca ttactcatca ctaatcactc
     1261 atggggtgat gggttggcag ttgtgagtgg tgagaatttt cgcatgcagc taacagagag
     1321 cttcctccga gctctctgct cgctttgtgt gagagaaatt gttagacttg atgattaatc
     1381 cgtgcacatt tgtgttatcc gtgagagaaa tgattgggca tcctgcaaca caagctcgat
     1441 gaactttcgc acggagcaaa cagactaagg cagatctttc ttcgagccct ctgctcgctc
     1501 tgtgcgagaa attttccggc caacctcata accaatccga gcatatctgt gcgatcctga
     1561 gagaaaaata attgctctgg cgtcctctat attcaccatg gagaattacc aatcggttcg
     1621 cactctgttt actcatcact gatcactcat tattcattta tcgttgatta ggctaatatt
     1681 taatccggat tcttaaaaat tcagggacca ttcacaactc acattttcgt ttctttgcca
     1741 ccgcatgcaa caacctgcga acatcatgtg gtttcgccgc gatctgcggc ttcacgacaa
     1801 tgcagcgtta taccacgctt tgactcatga ctttcccgtt attccgattt tcatttttga
     1861 taaaaatatt ttggatgacc tggaagacaa gcacgatcga cgagtggaat ttatccgcga
     1921 agcagttgtg gacatgcagg aagagttaga aaagcatggt agctcgttta aagggtttta
     1981 cgatacgccc gccggcgcat tcaaagaatt gctcaagaac tattccttaa aaaaagtttt
     2041 tgcaaatgaa gattacgaac agtatgcgat cgacagagac aaagagatcg cttcgctttt
     2101 gaaagaacat aaaacagaac ttaaattata taaggaccag gtggtgttct caaaaaatga
     2161 gatattgaaa gaggacggtc atccttacac ggtattcaca ccttacagca aaaaatggct
     2221 ggcgaagctg aatgaatttt acctcgaacc gtatcccaca aaaaaatatt ttaagaattt
     2281 ttatcagcaa cctccgcatc gcatcccgtc actagatagt atggaattta aaaaagttgg
     2341 ccggcccttt ccatcgaaag aaatagatga ggacttaatt agaaact
//
LOCUS       DASQJI010000323         2738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1110441,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000323 DASQJI010000000
VERSION     DASQJI010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110441"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VEV83_09040"
     CDS             complement(<1..1065)
                     /locus_tag="VEV83_09040"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK45300.1"
                     /translation="MKQFQQNITQPSENGESFPLGSTIFADGVNFSLFCKNGDKVELL
                     FFDHVDDNEPSKVITLDAHNNRTYHYWHVFVAGVKSGQLYAYRIDGRFEPWNGHRYDG
                     TQILLDPYSHAVAVPDGYNHFADQHAGNRTPAMKSVVADLSSYDWEGDTALRRPFAKT
                     VIYEMHVAGFTRNPNSKVEPSKRGMYAGVIEKIPYLVDLGITAVELLPVFQFDEQDCP
                     KGLVNYWGYCPVSFFAPHQGYSSSKDPLHVLDEFRDMVKAFHRAGIEVLLDVVFNHTA
                     EGNHEGPTFSFRGIDNIVYYILEDDKNFYSNFSGTGNTLNANQPIVRRMIIDSLHFWV
                     SEMHVDGFRFDLASILSRDEK"
     gene            complement(1079..>2738)
                     /locus_tag="VEV83_09045"
     CDS             complement(1079..>2738)
                     /locus_tag="VEV83_09045"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HYK45301.1"
                     /translation="SETISKVLYPNDVPDAGKRLRLSQQYFFVSCSLQNVLYLQKLRD
                     LSIDELSGSIALQLNDTHPAIAVAELMRLLVDEHLMDWDKAWQITQDTLGYTNHTLLP
                     EALEKWSLPLFASLLPRHLEIIYEINDRFLKQVKTMSNDEDLVRRVSIISESDSRYVR
                     MANLACVGSHAINGVSALHTELLKQDVLADFCKLSPQKFFNVTNGVTPRRWMRLYNPK
                     LSDLISSKIGDGWVTDLEDELIKLEKFADDADFLNRWRAIKHQNKAELAAVIKERIEL
                     DVDPASLFDIQVKRFHEYKRQHLNVLHIISLYNSIKKNPAIDITPRTFIFGGKAAPGY
                     TMAKLIIKLINSVAEIVNNDTDVNGRIKVVFFPDFNVKNSEHIYKAADLSEQISTAGK
                     EASGTGNMKFALNGALTIGTYDGANVEMVERIGRDNFFLFGLTVDEVMSTKRSGYRPY
                     EIYSADTDLKEVIDLIQSGFFSKGDAELFKPVTDSLLLDDQYLTLKDFRSYVDCQAQV
                     SQMYKDKNAWTKMSVLNVARMGFFSSDRSMKEYCEKIWHVKTNQ"
BASE COUNT          770 a          638 c          562 g          768 t
ORIGIN      
        1 cttttcgtcg cgtgataaaa tcgatgcaag atcaaatcga aaaccatcca catgcatctc
       61 acttacccaa aaatgcaaac tatcgatgat cattcgccga acgatcggct gattcgcatt
      121 cagtgtatta ccggtgcctg aaaagttcga ataaaaattt ttgtcatcct cgaggatgta
      181 gtaaacaatg ttgtcaatac cacgaaaaga aaatgtcggc ccttcatgat taccttccgc
      241 cgtatgatta aatactacat caaggagcac ttcaattcct gccctatgaa aagccttcac
      301 catgtcgcga aattcatcga gcacatgcaa aggatctttt gaagaactgt aaccctggtg
      361 tggtgcaaaa aaagaaaccg gacaatatcc ccagtagttc actaagcctt tgggacaatc
      421 ctgttcatca aattgaaaaa ccggaagcag ttctaccgct gtaatcccaa ggtcaacgag
      481 gtaaggaatt ttttcgatca ctcctgcata cattcccctt ttcgacggct caacttttga
      541 gttaggattc cgcgtaaagc cagcaacatg catttcataa attaccgttt tcgcgaacgg
      601 ccggcgcaga gccgtatcac cttcccaatc gtacgaggag agatcagcca caacgctttt
      661 cattgccggc gttctattcc ctgcatgttg atctgcaaaa tgattatagc cgtcggggac
      721 cgctacagca tgcgagtatg gatcgagcaa aatttgggta ccgtcgtacc tatgaccatt
      781 ccatggttca aaacgcccat cgatccggta tgcatataac tgcccactct tcacacctgc
      841 cacaaacaca tgccagtaat gataagtacg gttgttgtgc gcatcgagtg tgatcacttt
      901 tgatggttcg ttatcatcaa cgtgatcaaa aaagagcaac tcaaccttgt cgccgttttt
      961 acagaacaga gagaaattta caccgtccgc aaaaatggtc gaaccaagcg ggaaactctc
     1021 gccattttca gacggctggg tgatattttg ctgaaactgt ttgataagtt gcgatgagtt
     1081 attggttggt ttttacatgc catattttct cacaatattc tttcatcgat cggtcagaag
     1141 aaaagaatcc cattctcgca acattcagca ctgacatttt tgtccacgcg tttttgtctt
     1201 tgtacatctg tgagacttgc gcctggcaat ccacatacga gcgaaaatct tttaacgtca
     1261 aatattgatc atccaggagg agtgagtctg tgaccggttt aaataattcg gcatctcctt
     1321 tagaaaaaaa cccggattga atgagatcga taacttcttt caaatccgtg tcggccgagt
     1381 aaatttcgta cggacgataa ccggagcgtt tggtgctcat cacttcatca accgtcaagc
     1441 caaacagaaa aaaattatcg cgcccgatcc gttccaccat ttcaacattc gctccgtcgt
     1501 aggttcctat tgtaagcgct ccgttgagtg caaatttcat attgcctgtg ccggacgctt
     1561 ctttgcctgc cgttgaaatt tgttcggaaa gatcggctgc cttataaatg tgttcactgt
     1621 tctttacgtt gaaatccggg aagaatacaa ctttgatgcg gccgtttaca tctgtatcat
     1681 tgttcacaat ttctgcgact gaattgatga gtttaatgat aagctttgcc atcgtatagc
     1741 cgggcgcagc ttttccgcca aaaatgaaag tcctcggggt tatatcaatt gctggatttt
     1801 ttttaatgct gttataaaga ctgataatgt gcagcacgtt caagtgttgc cgcttgtatt
     1861 cgtgaaaacg tttaacctgt atgtcgaaca acgaggcagg gtcgacatca agttcaatgc
     1921 gttcttttat gacagcagcc aattcagctt tgttttgatg tttgatggcc ctccacctgt
     1981 ttagaaaatc tgcatcatca gcaaattttt caagctttat caattcgtcc tcgagatcgg
     2041 tgacccatcc gtctccgatc tttgatgaaa tgaggtcaga cagtttcgga ttatacaatc
     2101 gcatccacct tcttggtgta actccgttcg taacattaaa gaatttttga ggcgacagtt
     2161 tgcaaaaatc tgcgagtaca tcctgcttca gtaactcagt gtgcaaggca gacacgccat
     2221 tgatggcatg actaccaaca caggcaagat tggccatcct aacgtatcgc gaatcgcttt
     2281 cgctaatgat cgaaactctt cgaacgagat cttcatcatt ggacatggtc ttcacctgct
     2341 tcaaaaaacg atcgttgatc tcataaatga tctcgagatg tcgcggtaac agcgatgcaa
     2401 agaggggcaa cgaccatttt tcaagagctt caggtaacag cgtatgattg gtataaccca
     2461 aagtatcctg cgtaatctgc cacgccttat cccaatccat aagatgttcg tcaacgagaa
     2521 gcctcatcaa ttccgcgaca gcaatcgccg gatgtgtatc atttaactgc agcgcgatgg
     2581 aaccagaaag ttcgtctata gaaaggtcgc gcaacttctg caggtaaaga acattttgta
     2641 acgaacacga aacaaaaaaa tattgttgag acagtctcag tcgcttgccg gcatcgggca
     2701 catcgttggg ataaagaact tttgaaattg tttcagac
//
LOCUS       DASQJI010000324         4091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1572107,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000324 DASQJI010000000
VERSION     DASQJI010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572107"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2348)
                     /locus_tag="VEV83_09050"
     CDS             complement(<1..2348)
                     /locus_tag="VEV83_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HYK45302.1"
                     /translation="MKKFFPLRVFGLFLISISFLTVCGFAQSVPQLGKSSVKDVIGAM
                     TLEEKAKLVVGNGFNMPGAGGPTIGQTKDKVAGAAGTTFAIPRLGIPSIVVSDGPAGV
                     RIDSIRNGDRSKTYYATAWPVATLLASSWDTALVKKVGAAFGSEVHDYGIDVLLAPAL
                     NIHRNPLGGRNFEYYSEDPVVAGHITAAMVNGVESNGVGTSIKHFAANNQETNRNTVN
                     SVVSERALREIYLKGFEIAVKEAQPWTVMSSYNKINGTYTSEEYDLLTTILRKEWGFK
                     GLVMTDWFGGKDPVAQMKAGNDLLMPGTKEQSQKIIDAVKNGTLDEKVLDQNVERVLN
                     LVLESPSFKGYKYSDKPDLKKDAEISRTAAEEGMVLLRNNDNALPFSKSTQKVALFGI
                     GGYQLIAGGTGSGDVNKAYTVSLVQGLSNAGYEVNADVKNVYTSYLAEEKAKHPKKSF
                     FEEFRNPTPPISEMFVDNGVLSKAASDDIAVIAIGRNAGEGRDRKLENDFNLSDTEKS
                     MIKTVADAFHSQNKKVVVVLNIGGVIEVASWRDNVDAILLAWQPGLEGGNAVAAILSG
                     KVNPSGKLATTFPLKYDDDPSSKNFPGKEFPDQATTTSFGMKQIPAEVTYEEGVYVGY
                     RYYNTFNITPAYEFGYGLSYTDFSYENLKLSSGEFKDKITVTFTVKNTGKTAGKEVVQ
                     LYLSAPANKMDKPSEELKAFAKTNLLQPGKSQTITFTLTAADLASFDTNSSSWIAEAG
                     PYAVRIGSSSTKIRFSKPFTLASDIVVEKDNKVLSPQVNINEL"
     gene            2566..3183
                     /locus_tag="VEV83_09055"
     CDS             2566..3183
                     /locus_tag="VEV83_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HYK45303.1"
                     /translation="MPTTDLRIDQYIDKKADFAKAILKHIRELVHKACPDVEETIKWG
                     MPYFENKGEILCAMAAFKEHCTFLFWKASLMKDPEKIFQITDREAMGHFGRISSLKDL
                     PSDKILIAYIKEAAKLNEDNVKLAPRKKSVETKELDTPVDLSAALKKNKKAAAHFEKF
                     PPGKKKEYILWLTDAKTEATRMKRLETAVEWISEGKSRNWKYENC"
     gene            complement(3198..>4091)
                     /locus_tag="VEV83_09060"
     CDS             complement(3198..>4091)
                     /locus_tag="VEV83_09060"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45304.1"
                     /translation="RNEYLWTVKDTTSTGVFKMETSFGSFLSKQFIISPVTRLSVDFV
                     CEDSFQLSWNKHLYADMYNIYALANSPYLEKVLAVQDTFVVLKRSRYPEVVYAVQPLL
                     RNNVAAARSAAINIEQQNVQCFFKTLYYNLLSQNVLQLVLEVGGVSYIDRIYFERVTQ
                     AGKVLQTYDGIKPTNSTIYNQSITSVPFGTSYWRAKIKLKSGEVVYSYIISVLTSGSR
                     YIIFYPSPSPRNITLQYTLQQDVPTDCRLQIFDIMGRMIKSYSELPSSIDLRSFGPGV
                     YIYKLFTADEQLLETGKLVLQ"
BASE COUNT         1116 a          956 c          842 g         1177 t
ORIGIN      
        1 agttcattaa tgtttacctg cggtgacaaa accttattat ctttttctac tacaatgtcg
       61 ctcgcaagcg tgaatggttt gctgaacctg atctttgttg atgaagaacc gatgcgcacc
      121 gcataaggtc cagcctccgc gatccatgaa gaactgtttg tgtcaaacga cgcaagatcg
      181 gctgctgtta acgtaaatgt gatcgtttgc gacttgcccg gctgcaacaa attcgttttt
      241 gcaaatgctt ttaattcttc agacggctta tccattttgt tcgcaggcgc actcaggtat
      301 agttgcacta cttcctttcc agccgttttc cccgtattct taaccgtaaa cgtaacagtg
      361 atcttatcct tgaattcccc ggagcttaat ttgagattct cataactgaa atcagtataa
      421 gataagccat acccaaactc gtaggccggc gttatattga aagtattgta atagcgatag
      481 ccaacataaa ctccttcttc ataagttact tcggcaggaa tttgtttcat gccaaagctt
      541 gttgttgtag cctggtcggg aaattccttg ccggggaaat tttttgaaga aggatcatcg
      601 tcgtatttta aagggaaggt cgttgccagc ttgcctgatg gatttacttt gccgcttaat
      661 atagctgcga cagcattacc tccttcaaga ccaggttgcc aggctaacag tattgcgtct
      721 acattgtctc tccaactcgc aacttcgatg acacctccga tattcagtac gaccaccact
      781 tttttatttt gtgagtgaaa ggcatcggca acagttttta tcatgctctt ttcggtgtct
      841 gataaattaa aatcgttttc aagtttccgg tctcttcctt caccggcatt tctgccaatt
      901 gcgatgacgg cgatgtcatc gcttgcagct ttactcaaaa caccgttatc aacaaacatc
      961 tctgaaatgg gcggcgtcgg attgcggaac tcttcaaaga aacttttttt cggatgcttc
     1021 gctttttctt cggccaggta actcgtgtaa acgtttttta catcagcgtt aacttcatag
     1081 ccggcgttgc tcagtccctg cacaagcgag acggtgtatg ctttattaac gtcaccgctg
     1141 ccagttccgc cagcgatcaa ttgataaccg ccgatgccaa acaaggcaac tttttgcgtg
     1201 ctcttgctaa atggaagtgc attgtcgtta tttcttaaca agaccatacc ttcttctgct
     1261 gcggttcgtg atatttcagc atcttttttc agatccggtt tatctgaata tttgtacccc
     1321 ttgaacgaag gcgactcaag taccaggttc aaaacccgtt caacgttttg atcgagcact
     1381 ttctcgtcga gtgttccgtt cttaacggca tcaataattt tttgggattg ctctttggta
     1441 ccgggcatca acaggtcgtt acctgctttc atttgggcaa cgggatcttt tccgccgaac
     1501 caatcggtca tgacaagacc tttgaatccc cactctttgc gtaagatcgt tgtaagcaaa
     1561 tcatattctt ccgaagtata agtaccgttg atcttgttgt aagaactcat cactgtccat
     1621 ggctgtgctt cctttacggc gatctcaaat cctttcaggt agatctctct caacgctctt
     1681 tcgctcacaa ccgaattgac cgtattcctg ttcgtctcct ggttgttagc tgcgaagtgt
     1741 ttgatcgaag tgcccacgcc gtttgattca acgccattca ccatcgcggc cgtaatatgt
     1801 cccgcaacaa cagggtcctc tgagtaatat tcaaaatttc ttccgcctaa cggattgcga
     1861 tgaatattta acgccggcgc caacaaaaca tcgataccgt aatcatgtac ttcacttccg
     1921 aaagccgcac ccactttttt taccaatgcc gtatcccacg atgatgcaag caatgttgcc
     1981 accggccatg ctgttgcata atatgttttt gaacggtctc cgttgcgaat cgaatcaatc
     2041 cgcacgccgg caggcccgtc ggaaacaacg atcgaaggaa tacccaatcg cggaattgcg
     2101 aacgtggtgc ctgctgcgcc agcgaccttg tccttcgttt ggccaattgt tggccctcct
     2161 gcgccgggca tattgaaccc gttgccgaca acaagttttg ctttttcttc cagcgtcatg
     2221 gcgccgataa catccttaac gctgcttttt cctagttggg ggacgctttg tgcgaagccg
     2281 caaacggtca aaaaagaaat ggagatcaaa aacaacccaa atacgcgaag cgggaaaaac
     2341 tttttcatac tagaagttca tgaagttaaa tgtaaatgag agcgtgttgt aaaggaaacc
     2401 aatcaacttg ttctctgttt gagccgcgaa attaaaatgc atatctcccc gctgtcaaaa
     2461 attagatgaa caggcaaaat attgcgacat aaaaacttac aattgtaagt aagcttatgg
     2521 cgtaatttca aaaagttttt aatttgtctt cttaataatt cgtttatgcc aaccaccgat
     2581 ctgcgcattg accagtacat tgataaaaag gcagattttg ccaaagcaat tttgaaacat
     2641 attcgtgagc ttgtacacaa agcttgcccg gacgttgaag aaacgatcaa atggggaatg
     2701 ccctacttcg agaacaaagg agaaattctt tgcgcgatgg ctgctttcaa agaacactgc
     2761 acttttctgt tttggaaggc ttcgctgatg aaagatcctg aaaagatctt ccagatcaca
     2821 gatcgggaag caatgggaca ttttgggagg atcagttccc ttaaagatct gccttcggac
     2881 aaaatactga tcgcatatat aaaagaggca gctaaactaa acgaagacaa cgttaagctt
     2941 gcacctcgca aaaaaagtgt tgaaacaaag gaactcgaca cgcccgttga tctaagcgcg
     3001 gcactaaaaa agaataaaaa agcggcagct cacttcgaaa aatttccacc cgggaaaaag
     3061 aaagaataca ttttatggct aacagatgca aaaacggaag ccaccaggat gaagcgatta
     3121 gaaactgctg tggaatggat ttccgaaggc aaatcgcgga actggaagta tgaaaactgt
     3181 tgagcctaaa tgtatcatca ctgcaaaaca agttttcctg tttcaagtaa ttgttcatct
     3241 gcagtgaaca atttataaat atacacgccg ggaccaaagc ttcttaagtc gatggaactt
     3301 ggcagctctg aataactttt tatcatccgg cccatgatat caaatatctg caaccggcag
     3361 tccgtcggta catcttgttg cagcgtatac tgcaacgtaa tgtttctagg cgaaggactg
     3421 gggtagaaaa taatatacct gctgccggat gtaagcacag aaataatata actgtacacc
     3481 acttccccac ttttcaattt tatttttgca cgccaatagc tggtaccaaa tggcacgctc
     3541 gtgatcgact ggttgtaaat tgtgctgttg gtcggtttta tgccatcgta agtttgtaac
     3601 acttttcccg cctgcgtcac tctttcaaaa tatattctgt caatgtagct cacgccgccg
     3661 acttccagca cgagttgaag cacattttga ctaagcaaat tgtagtaaag cgttttgaag
     3721 aaacattgta cgttttgctg ttcaatgttt atcgcagcgc tgcgtgctgc agcaacattg
     3781 ttcctgagta aaggctgcac tgcatacaca acctccgggt aacgcgatcg ctttaataca
     3841 acgaaagtgt cctgcaccgc cagcaccttt tccaggtatg ggctgtttgc gagcgcataa
     3901 atgttataca tatcggcata caggtgctta ttccacgaca actgaaaaga atcttcgcac
     3961 acaaaatcaa cggatagtct tgttaccggg ctaatgataa attgcttcga taaaaaactg
     4021 ccgaatgaag tttccatttt aaagacgccc gtgctcgtcg tatcttttac ggtccacaaa
     4081 tattcgttcc t
//
LOCUS       DASQJI010000325         4583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_36241,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000325 DASQJI010000000
VERSION     DASQJI010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4583
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36241"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VEV83_09065"
     CDS             complement(<1..560)
                     /locus_tag="VEV83_09065"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45305.1"
                     /translation="MKAVIIEDESLVARELKNKVASVAPDVTVIETLPSLKTARKWFM
                     ENAEPDIIFADIQLSDGASFEIFERYELKCPVIFTTAYDEYAVRAFKVNGVDYLLKPV
                     DVSELKKAIDKSRNLVEQKTKLPYMLQELMQVLQAPSAGTTMFKEKFVVKVRNNWIPV
                     STKDIACFVRENLNYIFTFSGEKYIA"
     gene            complement(557..3604)
                     /locus_tag="VEV83_09070"
     CDS             complement(557..3604)
                     /locus_tag="VEV83_09070"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK45306.1"
                     /translation="MLLRRYIVYILVLIPCFGRSQNSSFLFHHFTEKDGLSSNYVTCL
                     LKDKRGVLWLGTYDGLNWFDGAHFYNFKKTKQSSSIINNVIHDLCEDAEGNIWGATDN
                     GIFCYDITQNIFRNYQAPISKIAPSLTNVARGVNNVLCDSKGRIWATGTWTILKFNAA
                     EKKFEEIGPLSPVSDSLDNYSVRRNGLIEDPGKKGLWFTTREEGLVYYDYNSGTFTSF
                     KNDADSLFRKRSVSSITVSGSGACWFCDNTNQQIIRFDPSTRKEIMKIDLAGKVSAGV
                     CSTLFEDSQNRLWYGNWNSEIALVEFEQGATVTRIKNEKSNHLSIAADFLAGVLEDKD
                     GTVWLATTGGLSNTNSTKSIYRIHWLDRIPILKNNSLRLVLEDPADKSWWMATRGPLY
                     AIHYFPVTGKYIIYDLQQAQKNVIGLLPGPVNNIRFIDGKPVLCTWWGAWQIDVAANR
                     IFPFSPGPAVDPKFIIGDMVERDGVFYLSNQNEMLRYVRSENKLDRLKFVNPKLPDGQ
                     RPAIKALCLTPDNNLWFIAGFGWLGHNNGNNELAPFYVVKNEDEELNGWLNSIACDRN
                     SNLWLAAFGIGLYGVFTSSDSAKLWNETDGLIYNHVQNVIPDDNGDIWCAAYNRFSVF
                     TPATGSFYNFIVPLSENTVEYENGLGQLSNGHIVASLDNNVVEFFPGRLKIKPILAKP
                     IIGAVNIAGSQRFLNGDTTLQLQPDEKFLSLNFGLMTDREIFPYQLEYRLKGFDDKWS
                     VAGAGNQAVYSKLPSGNYTFEVKAKAINGDWETPVSTLKIQIKTPFYRSAWFISVVAC
                     IVCALLFFFYRFRIAKQKQVFALETKAQLLEKEKALVMYEGLKQQLNPHFLFNSLTSL
                     SSLITVDPQTATQFLDSLSKTYRYILKSRDAETVPLSDELKSAENYVNIQQTRFERGF
                     CVRITVPDESLHKKIVPVTLQNMIENAIKHNIIDEDSPLVVEIFVENGYIVVRNNLQK
                     KKFVETSNKQGLTNLQSLYRYLTSHPVEIISDENFFTIKIPLV"
     gene            complement(3721..4140)
                     /locus_tag="VEV83_09075"
     CDS             complement(3721..4140)
                     /locus_tag="VEV83_09075"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HYK45307.1"
                     /translation="MTNEEIAMVKRSWRSLRHFNPMVIGDSFYSKLFSKKTSLRKMFP
                     GNMQDHYKELVELLHSIIARLDDPSLPAEQVELFARRHIHYALTPTHYKLIEEAMLWT
                     LERALGNDCNDHVLTAWKNCYAALVEKTIAASEVIVK"
BASE COUNT         1271 a         1050 c          925 g         1337 t
ORIGIN      
        1 tcggcaatat atttttcgcc gctgaacgta aaaatataat tgagattttc tcttacaaaa
       61 caagcgatat ctttcgtcga gaccgggatc caattgtttc tcactttcac tacaaacttt
      121 tccttaaaca ttgttgtgcc ggctgacgga gcttgcaaca cctgcataag ttcctgcagc
      181 atgtatggca attttgtttt ttgctcgacc aggttcctgc tcttatcgat cgctttctta
      241 agctcgctta catctaccgg ctttagcagg taatccacgc cgttaacttt aaatgcacgc
      301 accgcatatt catcataggc agtggtgaaa atgaccgggc atttcagctc atatctttca
      361 aagatctcaa agcttgctcc atcacttaat tgtatatcag cgaagatgat gtcgggttcc
      421 gcattttcca tgaaccattt gcgggctgtt ttcaggcttg gcaatgtttc gatcaccgta
      481 acatcagggg ccaccgaggc aactttattt tttagttcac gtgctaccag gctttcgtct
      541 tcaatgatca ctgctttcat accaaaggaa ttttaattgt gaaaaaattt tcgtcgctga
      601 ttatttctac aggatggctg gtgaggtaac gatacaggga ttgcagattg gtcagtccct
      661 gcttattact tgtttccaca aacttctttt tttgcaggtt attacgcaca acgatgtaac
      721 cattttccac gaagatctca acgaccagcg ggctgtcttc atcaataatg ttgtgcttga
      781 tcgcgttttc gatcatgttt tgcaaagtga ccggaacaat ttttttgtgc agggattcgt
      841 caggcactgt gatcctgaca caaaagccac gctcaaacct tgtttgttga atgtttacat
      901 agttttctgc tgacttcaat tcatcggaaa gcggaactgt ttccgcgtcc cggcttttca
      961 gaatataacg gtacgttttg ctgaggctat caagaaactg cgttgccgtt tgcggatcaa
     1021 cagttatcaa actactcaaa gatgtgagcg aattaaacaa gaagtgcgga ttcaattgtt
     1081 gtttcaaacc ctcgtacatc accaatgcct tttctttttc aagaagctgt gctttggttt
     1141 ccaatgcaaa tacttgtttt tgcttagcaa ttcggaagcg gtagaaaaaa aatagcaacg
     1201 cgcaaacgat gcacgccaca acagaaatga accacgcgga acgatagaac ggtgttttga
     1261 tctgaatttt taatgttgag accggcgttt cccagtcacc gttgatagct tttgctttga
     1321 cctcaaaagt atagttaccc gatggaagct tgctatacac ggcctggtta cccgcccctg
     1381 ccacactcca tttatcgtca aatcctttca acctgtattc aagctggtac ggaaaaattt
     1441 ctctgtcggt catcaggcca aaatttaatg acaagaactt ttcgtccggc tgtaattgga
     1501 gtgtagtatc cccgttgaga aatctttggc taccagcgat atttacggcg ccgatgatcg
     1561 gtttggcaag tattggtttt atcttaaggc gccccggaaa aaattcaacg acattgttat
     1621 cgagagatgc aacaatatgt ccgttagaaa gttgtcccag gccattctca tactcaacgg
     1681 tgttttcact aagtggaaca ataaaattat aaaagctgcc tgtggctgga gtaaaaacag
     1741 aaaaacgatt gtaagcagca caccatatgt ctccattatc atccggtatc acattttgaa
     1801 catgattata tatgagtccg tcggtttcat tccaaagctt cgcagaatct gacgaagtaa
     1861 atacgccata caaaccaatc ccgaaggcgg ccaaccacaa attgctattg cggtcgcagg
     1921 caatcgaatt cagccaaccg ttcaattctt cgtcttcgtt cttaacaaca taaaaaggag
     1981 ctagctcgtt attgccattg ttgtgcccaa gccagccaaa gccggctatg aaccacaagt
     2041 tattatctgg ggtcaaacac aatgctttga tcgcaggccg ttggccatcc ggtaattttg
     2101 gatttacgaa ttttagccga tccagcttgt tttcgctgcg gacatatcgc aacatttcat
     2161 tttggttgga caaataaaaa actccatcac gttcaaccat atcgcctatg ataaactttg
     2221 gatcgaccgc gggccccggg gaaaaaggaa agatgcgatt tgctgctaca tctatttgcc
     2281 atgcccccca ccaggtgcac agtaccggct taccatcaat aaagcgaatg ttattgacag
     2341 gtcccggcag taagccaata acattcttct gcgcctgttg tagatcgtaa ataatatatt
     2401 taccggtcac aggaaaatag tggatcgcat acagcgggcc gcgggttgcc atccaccagc
     2461 ttttatcagc cgggtcttcg aggaccagcc gaagggagtt gtttttgagt ataggaattc
     2521 gatccagcca atgaatgcgg taaatcgatt ttgttgagtt ggtgtttgac agaccacccg
     2581 tagtcgccag ccataccgtg ccatctttgt cttctaatac cccggccaga aaatccgcag
     2641 caatcgaaag gtgattgctt ttttcgttct tgatcctcgt gactgttgct ccttgttcga
     2701 attctacgag tgcaatttcc gaattccaat tgccatacca gagccggttt tgcgaatcct
     2761 caaacaaggt agaacacacg cctgccgata ccttgccggc caaatcaatc ttcattattt
     2821 ccttgcgtgt cgagggatcg aagcgtatta tttgctggtt cgtattatca caaaaccaac
     2881 aggcgcccga gcccgaaacc gtaatcgagg atacactccg tttccggaaa agtgaatcgg
     2941 catcattctt aaagctggta aacgtgccgg aattgtagtc atagtatacg agcccttcct
     3001 cccgggtagt aaaccataat ccttttttcc cgggatcttc aatcaaccca tttcttctaa
     3061 cggaataatt atccagcgaa tcactgaccg gagacagcgg accaatttct tcaaactttt
     3121 tttccgcagc attaaatttg aggatcgtcc aggtgccagt tgcccatatc cttcctttcg
     3181 aatcacagag tacgttgttt acacctcttg caacgtttgt caatgatggc gcaatttttg
     3241 aaattggcgc ttgatagttc ctgaaaatat tttgtgttat gtcgtagcaa aaaattccgt
     3301 tatcggttgc accccagata ttgccttctg cgtcttcaca cagatcatgt atcacattgt
     3361 ttataataga ggatgattgt ttggtctttt tgaaattata aaaatgcgct ccgtcaaacc
     3421 agtttaatcc atcataagtt cccagccata aaacgccgcg cttgtccttc agcagacacg
     3481 taacataatt gctgctgagt ccatctttct cagtgaaatg atgaaacagg aatgaactat
     3541 tttggcttcg gccaaagcag ggaatcagaa ctaaaatata gacgatataa cgtcgcagta
     3601 gcatggttgc ccaaagtaac aacaaaacgc agatgtaaga aactgaagag gcgaactgca
     3661 taaaccataa aatgaaacgt ggcaaaacac gaataagtcg gaacgcggag aatgaaaaaa
     3721 tcactttacg atcacttctg atgcagcgat cgttttttca acaagcgcgg cataacaatt
     3781 tttccaggcc gttaatacgt ggtcattaca atcgttccca agcgctcttt ccaaagtcca
     3841 taacatggct tcttcaatca gcttataatg cgttggtgtc aatgcataat gtatatgcct
     3901 gcgcgcgaat aattcgactt gctccgccgg cagggatggg tcatcaagtc ttgcaattat
     3961 cgaatgcaac agttccacca actctttata atgatcctgc atgttgcccg gaaacatttt
     4021 tcgcagcgaa gtttttttcg aaaacagttt gctgtaaaaa ctatcgccga ttaccatcgg
     4081 attgaaatgc cgtaatgacc gccatgatct ttttaccatc gcaatttctt cgtttgtcac
     4141 ttttttgatt ttatcaaagg atgatatgcc ttagccactg caaatcggct tcgcaccggc
     4201 aattaattat caagattaca acgcaggcaa actgtccgaa aactttattg accgaaaaga
     4261 tggaacggtc tattaaaggg tggcatacag cgactgaacc gttgcctaag agcggctcaa
     4321 cggcaattga cgctgcgccg gttttagaaa gagatacgat tcaattcaat ttaaacacca
     4381 ttcaattaaa acgtcagaac cctgacgctg ttaaaatttt tttccgcggt tggctgaatc
     4441 atatttgatc ttaagatgtt ttgatcaagt gttcgattgg ttttttaaaa aatcatcact
     4501 aaaaatgcaa ttatgagaaa gaatttgctc ttcacacttt taggctttat agccgtaggc
     4561 tcgctgcgtg cacaaacaaa cac
//
LOCUS       DASQJI010000326         4106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_190175,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000326 DASQJI010000000
VERSION     DASQJI010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190175"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VEV83_09080"
     CDS             <1..526
                     /locus_tag="VEV83_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sodium transporter"
                     /protein_id="HYK45308.1"
                     /translation="FSLDIYKKYFKKNASEKQLVRTGRISVVVAMLLAGMVAPALKNL
                     DQAYQFIQEYVGFISPGVLAIFLLGFFWKRTNTAAALTGALLTIPLSTVLKYLPNWTN
                     GAFPDYPFLDRMSIVFVIIVLLMIIISLADKKTQHNPKALIIDKSLFRCSPGFLVGSV
                     IIIGILSALYTVFW"
     gene            596..1471
                     /locus_tag="VEV83_09085"
     CDS             596..1471
                     /locus_tag="VEV83_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0050113 - inositol oxygenase activity
                     [Evidence IEA];
                     GO_process: GO:0019310 - inositol catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol oxygenase family protein"
                     /protein_id="HYK45309.1"
                     /translation="MSASFSKEELNPLQSIEQWEDDVLVRYPEPDVTAKSKEEFRNYD
                     DPQRDTVREFYRLNHTYQTYDFVKEKQKDFLQFNRKKLKVWEALEFLNTLIDDSDPDT
                     DLDQLQHLLQTAEAIREDGHPDWFVLTGFIHDMGKVLCLFGEPQWAVVGDTFPVGCAH
                     SDKIVYPEFFEANPDSNDERFNSKYGVYEHGCGLNNVNMSWGHDEYLYQITKDYLPEP
                     ALYMIRYHSFYAQHREHAYDHLLNDHDREMFEWVKKFNPYDLYSKSPKPPNVKELRPY
                     YEELIAKYLPEEICL"
     gene            1944..3920
                     /locus_tag="VEV83_09090"
     CDS             1944..3920
                     /locus_tag="VEV83_09090"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45310.1"
                     /translation="MNLLLRKTTAFAYVVLILTTYDADAQTTMYGALLQKPDMNTKLI
                     SANNLGIKYVRDAQLLSKWTGTKSYNIDFWKTHKKKMLLNINNDSTPSAFPTDLVAYE
                     SKLRSFLNVYASSIQLAVIENEELNSSSLQGNAYHLGSIQDYINELAVAVNVCQQIGV
                     PVTNGGLTSPIVASLRHYYIVNGKQDSLVWLVQNMNGVSTDSTLWLRTDSLLSAYKVL
                     PLSFVNLHWYEPAKDSTTTHGVLQVVCNYITQQTGKKVITNETGVRTTDSSFVTMLLQ
                     QWHTIGVAYCMFYDGTGSFGAQALTSPTADLLPTGVAFRNFVAGKNSCEQSITVTPSG
                     SIETCAGSNFTLSASDGFSNYLWSTGDTSRVITIKTTDNYSVTSTTSNCTAFSNGVAV
                     LVNKLPAKPVITSSPSPATNLCPNKTAKLTSSSAAYYLWNTGGTTKTITVNKPGNYLV
                     TVTDVNGCKNTSDPAVVTYQSCSPPINLRVADLTQFRAMLNWDTVQCSVGYQYQYRVK
                     GSLMWTTGQVVNGATSSRYIYNLKPSTTYEWRIQTRCRITPDTLLSDYANGPDFSTLA
                     PAIAQSSNNESQSNFEERIFPIPAKDFATLELSSIMTDLKIELRDLNGKLLWENDRVT
                     ETKITIPLSAFASGIYVVILRNKEYNKVIKLVKE"
BASE COUNT         1254 a          858 c          846 g         1148 t
ORIGIN      
        1 cttttcgttg gacatctata aaaaatattt caagaaaaat gcatcagaaa aacaattggt
       61 acgaacaggc cgtatatcag ttgtggtggc gatgctgctt gcaggaatgg tggcacctgc
      121 attaaaaaat cttgaccagg catatcaatt tatccaggaa tatgtcggtt ttatttcgcc
      181 cggagtgctc gccatttttt tattgggatt cttctggaaa cggaccaata ccgctgctgc
      241 tttaaccggt gcattactta ccataccgct ttccacggtt ctcaaatact taccgaactg
      301 gacgaatgga gctttcccgg attatccttt tctcgatcgc atgtcgatcg tttttgtaat
      361 aattgttttg ctgatgatca taattagttt ggctgacaag aaaacacaac acaatccgaa
      421 agcacttatt attgacaaat cattattccg ctgttcaccc ggttttcttg tcggttcggt
      481 gatcatcatt ggaattctgt cggcgttgta cacggtattt tggtaagaga tacctcctga
      541 aaagttcgcg gctgttcaca aaaaggctac ctttataaaa cttaaaatca tttacatgag
      601 tgccagcttt tcaaaagaag aattgaatcc gttgcagagt attgagcaat gggaagatga
      661 tgtgttggtc cgatatccgg aaccggatgt tactgccaaa tcaaaagaag aatttcgcaa
      721 ctacgacgat ccgcaaagag ataccgtgcg cgaattttat cggctgaacc acacgtacca
      781 gacctatgat tttgtaaagg aaaaacagaa ggacttctta cagttcaatc gcaaaaaatt
      841 aaaagtatgg gaagcgcttg aatttttgaa tacgcttatt gacgactctg atcccgacac
      901 tgatcttgat cagctccagc atcttttgca aacagcggaa gccataagag aagatggaca
      961 ccctgactgg tttgtactaa ctggtttcat tcacgacatg ggcaaagtgc tttgtttatt
     1021 tggcgaacca caatgggctg tagttggcga cacatttcct gtaggctgcg ctcattcaga
     1081 taaaattgtt taccccgaat tcttcgaagc aaaccctgac agcaacgatg aacgcttcaa
     1141 cagcaaatat ggcgtttatg aacatggctg cggattgaat aatgtgaaca tgagttgggg
     1201 acatgatgaa tatctctatc aaatcacaaa agattacttg cctgaaccgg cgttatacat
     1261 gatccgatat cattcattct atgcgcaaca ccgcgaacat gcgtatgacc acttgctcaa
     1321 tgatcacgat cgcgagatgt ttgagtgggt gaaaaaattc aatccttacg atctatattc
     1381 aaagagtcct aagccaccaa atgtgaaaga attgagaccc tattatgaag agctcattgc
     1441 gaaatatctt cctgaagaaa tttgtttgta gatcagtatt catctaatta agtaggttgg
     1501 aaaagcgcgt tgtaaatcga tcgcgctttt ttttgcgtaa tgcaacttca aaagtgaaag
     1561 agagtcgatt tgcagagcaa ctctgtttaa atttttcaaa gtgggatgtg catttgcgtc
     1621 ctttccggtt acacaaaaaa ctgatgttta actgatgctt cgtttattgt ttgaaaaaga
     1681 tttatcttgc atgccgttaa gatccaaatc ttttatgaga gacattgacc gaattgaata
     1741 cttgaactaa ttgcacactc tcatagcagg tttttaaacc caaaaattct acaacacgat
     1801 aacctgtttg caaataaagt atttgcaatt ggttgtttta tgttgttcga tctataaacc
     1861 aaaaaagatc ttaggaaaga tcaaaatcta aactgcgggg atgaagagcg atgcatctct
     1921 ttattcctta caaagatcca attatgaacc tgcttttacg caaaacaact gcgtttgcct
     1981 atgttgtgtt aatcctcacg acatacgacg ctgacgctca aaccacaatg tacggtgcct
     2041 tattgcagaa acctgatatg aatacgaagt tgatttctgc aaacaacctc ggcattaaat
     2101 atgtccgcga cgcgcaatta cttagtaaat ggaccggcac aaaaagttac aacattgatt
     2161 tctggaaaac gcataagaag aaaatgttgc tgaacattaa taacgactct actccctccg
     2221 catttccaac agatcttgta gcttatgaaa gtaagttgcg ttcgttcctg aatgtttacg
     2281 caagcagtat tcaacttgca gtaattgaaa acgaagagct gaattcatct tcgctgcagg
     2341 gcaatgccta tcaccttgga agcatccagg attacatcaa tgaattggca gtggccgtga
     2401 atgtgtgcca gcagatcggt gtgcctgtaa ccaacggcgg attgacaagc ccgatcgttg
     2461 caagcttaag gcattattat attgtgaacg gaaaacagga tagcctcgtg tggcttgtgc
     2521 aaaacatgaa tggagtttct actgactcaa cgctttggct tcgtacagac tctttgttat
     2581 ccgcgtataa agtattgcct ctctcctttg tgaatctcca ctggtatgaa ccggcaaaag
     2641 attcaactac gacgcacgga gtattgcagg ttgtttgtaa ttatataacg cagcaaaccg
     2701 gcaaaaaagt gatcactaat gaaaccgggg tccgaacaac tgattcatct tttgtaacaa
     2761 tgctgttgca acaatggcac acgatcggag ttgcttattg tatgttttat gacggtacag
     2821 gcagtttcgg agcacaagcg cttacatcac caacagccga cctccttccc accggtgtcg
     2881 cattcagaaa ttttgttgcc ggaaaaaatt catgtgagca atcaattact gtaacgccgt
     2941 caggatctat tgaaacatgt gctggcagta actttacgct ctctgcctcg gatggtttta
     3001 gcaattacct gtggagcaca ggcgacactt caagagtaat tacgatcaaa acaactgata
     3061 attattcggt gacatcaacc acgagcaatt gtaccgcgtt ttcaaacgga gtagcggttt
     3121 tggtgaataa gttgccggcc aaacctgtta ttacttccag cccgtcgcct gcaacaaacc
     3181 tatgcccaaa caaaactgct aaacttacat cttcgtcagc agcctattac ttatggaata
     3241 ccggtggcac aacaaaaact atcaccgtca ataaacccgg gaattatttg gttactgtta
     3301 cagatgtaaa cggttgtaaa aacacaagtg atccggcagt ggtgacatat caaagctgca
     3361 gcccacccat caatttgaga gtggcggacc tcactcaatt ccgagcgatg ttgaattggg
     3421 acactgttca atgctccgtc ggttatcagt atcaatatcg tgtaaaagga agtttgatgt
     3481 ggaccacagg acaggtagtg aacggggcca cttcttccag gtatatatat aatttgaaac
     3541 cttcaacaac ctatgaatgg aggatccaga cacgatgtag aataacgcct gacactcttt
     3601 tgagcgatta tgcaaatggg ccggatttca gcacgttagc acccgctatc gcacaatcgt
     3661 cgaataatga atcccaaagc aacttcgaag aacgaatatt tcccatacct gccaaagact
     3721 tcgcaacact cgagcttagc agcataatga cggatctgaa aattgaatta agagatctaa
     3781 acggaaagct tttgtgggaa aacgaccggg taaccgagac gaagatcaca atccctcttt
     3841 ccgcttttgc cagcgggatc tatgtggtga tcttacgtaa taaagaatac aacaaggtaa
     3901 ttaaactggt caaagagtaa tgtgcagatt tccacaaatc aaccgttcgt tgcaaatttc
     3961 acggcacggc aggtaatgaa ggatcaacct caaagcacaa aagttactgc ttaatgaatt
     4021 taagtacggt cgttttatca ctgtcatcaa ttgttacaaa ataggttccc ggcaatagtt
     4081 gttttatgtt gaatgaatag ctatta
//
LOCUS       DASQJI010000327         2621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_958109,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000327 DASQJI010000000
VERSION     DASQJI010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958109"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            256..1254
                     /locus_tag="VEV83_09095"
     CDS             256..1254
                     /locus_tag="VEV83_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYK45311.1"
                     /translation="MQTGEDIRILNEKIQHAAIFTDTLKNELAKVIIGQFDMIDRLMI
                     ALLSNGHILLEGVPGLAKTLTIKSLAQAVHAKFSRIQFTPDLLPADVTGTMIYNQQRG
                     EFIVRKGPIFANFILADEINRAPAKVQSALLEAMQEKQVTIGDQTYRLEEPFLVLATQ
                     NPLEQEGTYPLPEAQVDRFMMKVIVNYPDKTEEQLIIRNQVQGHKIPELTPVVSLSEI
                     NEGKELTRQVYMDEKIEKYIVDIVFATRFPEQYSLGRLKNLINYGSSPRASINLALAA
                     KAHAFMHKRGFVIPDDVKTISKDVLRHRIGLTYEAEAENVTGETIISEILRTVNVP"
     gene            1372..1740
                     /locus_tag="VEV83_09100"
     CDS             1372..1740
                     /locus_tag="VEV83_09100"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK45312.1"
                     /translation="MTHFKNLIAWQKAMNLVKETYLLLKKYPKDELFGLISQTKRAVI
                     SIPSNIAEGAGRNYKKDTVQFLHIARGSLYELETLFHIAVMTTILAETEFTHISRSID
                     ETHKILNGLINSFERRNGLK"
     gene            1788..>2621
                     /locus_tag="VEV83_09105"
     CDS             1788..>2621
                     /locus_tag="VEV83_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HYK45313.1"
                     /translation="MEVSELLKKVRALEIRSKRLTNHLFTGEYHTAFRGQGMAFKEVR
                     EYQAGDDVRFIDWNVSARMGHVYSKVFEEERELSVYLLIDVSASSLFGTFRQTKKDLI
                     TEMGAVIAFSAITNNDKVGLIFFSDKVEKYIPAKKGKDHVLYLMREMLTYQPHSASTD
                     VAKAIGYLNNVTRHKSIVFILSDFADAGYEQTLKIASRRHDIIGIQVYDRRDKELPKI
                     GLVQVRDAETGETILMNTKSSVTQYHYNRQYKKIQEDAKQNFRMAGADLVQLATGDDY
                     VK"
BASE COUNT          824 a          493 c          620 g          684 t
ORIGIN      
        1 cgcgaagtta attgtagagt gattcattga aaaatgctta atgtctgttt ccaaccggcc
       61 taatttttga aaccttcggt caacggtacc gcaaaaccgc gattggttaa tgttttcgca
      121 aagtataacg cattaatttt gaagtgaggg ttcgctgttt tactttgtaa tttcaccgaa
      181 gtatgtttta gggcaatcgt gttgtcttat tattttatgt ttttaattcg ttgttatctt
      241 acttaaacaa atttgatgca aacaggagaa gatatcagga tcttgaatga gaagatccag
      301 catgcagcaa tatttaccga cacacttaaa aacgaactgg cgaaagttat cattggacag
      361 ttcgacatga tagaccggtt aatgatcgcg ctgttgagta acggacatat cctgctggaa
      421 ggagttcctg gcctggcaaa aacgctcact attaaatcgc tggcgcaggc tgtgcacgct
      481 aagtttagcc ggatccaatt tactcccgac ctgttaccgg ccgatgttac cggtactatg
      541 atctataacc agcaacgcgg cgaattcatc gttcgaaagg ggcccatctt cgccaatttc
      601 attttagcag atgaaattaa ccgtgcccct gcaaaagttc aaagtgcgct gcttgaagcc
      661 atgcaggaaa agcaagtgac gattggtgat caaacttacc ggctcgaaga accctttctt
      721 gttttagcaa cgcaaaatcc gctggaacag gaaggtactt accccctgcc ggaagcacag
      781 gttgaccgct ttatgatgaa ggtgatcgta aattatcccg acaaaacaga agaacagttg
      841 atcatccgga accaggtgca gggccataag atccccgagc taacgccggt tgtaagcctg
      901 agtgaaataa acgaaggaaa ggaacttaca cgacaggtct atatggatga aaagatcgag
      961 aaatatattg ttgatattgt ttttgcgaca cgttttcctg agcaatattc gttgggcagg
     1021 ttgaaaaatc ttatcaatta tggaagttct cccagggcaa gtatcaacct cgctttggcg
     1081 gccaaggcac atgcgttcat gcacaaaaga ggatttgtaa ttcccgatga tgtgaaaact
     1141 atttcgaagg acgttctgcg gcatcgaatt ggtttaacct atgaagctga agcggaaaat
     1201 gtcacaggag agacgatcat ttcagaaatt ttgagaacgg tgaatgttcc gtgaaaaagt
     1261 tgacggttga ctgatgacag ttgacagaag agagtgcaga gatgattgtc gacggatgac
     1321 aagatgtaag tccgacactt aaaatacttt ttcaccttta aaaccctgtt tatgacacac
     1381 tttaaaaacc tgatcgcctg gcaaaaagcg atgaacttag taaaagaaac atatttgcta
     1441 ctaaagaaat atccgaaaga cgaattgttc ggtctaattt ctcagacaaa gagggctgtg
     1501 atttctattc cgtcaaacat cgccgagggc gcgggccgaa attataagaa agacacagtt
     1561 caattcctgc atatagcaag aggctcttta tacgaactgg aaaccttatt tcatattgca
     1621 gtaatgacaa ctatacttgc agaaacagaa tttacgcaca tttctcggtc aattgatgaa
     1681 actcataaaa tcttaaatgg attgataaat tcttttgaac gcagaaacgg tctgaaatag
     1741 catcgacgca tctgtcatct gtcaactgtc atctgtcaac cgattaaatg gaagtaagcg
     1801 aattattaaa gaaagtgcgg gcgcttgaaa ttcgcagcaa gcggctcacg aatcatttat
     1861 ttaccggaga gtaccatacg gcgttccggg gacagggcat ggcgtttaag gaagtgagag
     1921 aatatcaggc gggagatgat gttcggttta ttgactggaa tgtttcggca cggatgggtc
     1981 atgtttatag taaggtgttt gaagaagaga gagagctaag tgtttattta ttgatagacg
     2041 taagtgcgag cagcttgttc ggaactttca ggcaaacaaa aaaagacctc attacggaaa
     2101 tgggtgcagt gatcgctttt tcagcgatca cgaataatga taaagtggga ctgatatttt
     2161 tcagcgataa agtagaaaaa tatattccgg ccaaaaaggg aaaagaccat gtgctctatt
     2221 tgatgagaga gatgttaaca tatcagccgc attcagcaag cactgatgta gcaaaggcga
     2281 ttggctatct gaacaacgta acacgtcata agagcatcgt tttcatcttg agtgattttg
     2341 cagatgccgg ttatgagcag acattaaaaa tcgcatcgcg gcggcatgat attatcggta
     2401 tccaggttta tgacaggcgc gataaagaac tcccgaagat cgggcttgtg caggtaaggg
     2461 acgcagaaac aggtgaaacg atcctgatga acacgaagag cagtgtaacg caatatcatt
     2521 acaacaggca gtataaaaaa atacaggagg atgcaaagca aaattttcgg atggcgggcg
     2581 cagacctcgt tcagctagcg accggggatg attatgtaaa g
//
LOCUS       DASQJI010000328        10608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2186823,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000328 DASQJI010000000
VERSION     DASQJI010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10608
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2186823"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VEV83_09110"
     CDS             <1..301
                     /locus_tag="VEV83_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45314.1"
                     /translation="LVKWLDKPAEVYRAGQPYLSDAAKHNTRTPGGHPEGYLEAFGNI
                     YRNFAQSLMCKLQGSEPTAEMLDYPRVEEGVRGMAFIDNVVASSQSEKKWTEFAI"
     gene            471..1526
                     /locus_tag="VEV83_09115"
     CDS             471..1526
                     /locus_tag="VEV83_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK45315.1"
                     /translation="MTTLKGPAIFLAQFMGDQPPFNDLRSICEWVKSIGFIGVQIPTW
                     DARCIDLQKAAESKTYADELKGTVSDCGLEITELSTHLQGQLVAVHPAYDTLFDGFAA
                     ESVRGNPKARTEWAIQQLKWAAKASQNLGLDAHATFSGSLLWQTVYPWPQRPAGLVET
                     GFTELANRWLPILNYFDECGVDVCYEIHPGEDLHDGVSYEIFLEKVNDHPRACLLYDP
                     SHFVLQCLNYLEYIDNYHERIKMFHVKDAEFNPTGKQGVYGGYQNWIDRAGRFRSLGD
                     GQVDFKSIFSKLAQYDYKGWAVLEWECCLKHPEDGAKEGSKFIREHIIRVTEKAFDDF
                     AATGANEQLNRLVLGLQ"
     gene            1567..1965
                     /locus_tag="VEV83_09120"
     CDS             1567..1965
                     /locus_tag="VEV83_09120"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK45316.1"
                     /translation="MKCFLVLVACIFFACNSNQPDKSGINSNPTDSLINKGGTNIDSA
                     NETGSRLIAGNDCFTCHRIEEKNIGPSYREIARRYSLNQGNIENLAHKIITGGKGLWG
                     QNAMTPHPNLPEPQAEEMVRYILSIKDSAQ"
     gene            2032..2427
                     /locus_tag="VEV83_09125"
     CDS             2032..2427
                     /locus_tag="VEV83_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK45317.1"
                     /translation="MKKYLLTIAVISLVVACGNNASNSGANTDTSATASGANDISTNP
                     DYQKGVQLIASNDCLTCHKVDEKLTGPPYRDVANKYENTDANVKMLAEKVIKGGSGNW
                     GTVPMTPHAALSEADAEAMVKYILLLRNK"
     gene            2432..3184
                     /locus_tag="VEV83_09130"
     CDS             2432..3184
                     /locus_tag="VEV83_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK45318.1"
                     /translation="MNAWLIIAAASIIGSCNSQTSNSSIAADTTSIDSANESSAADSG
                     WTSLFDGTTLNGWHQFGGSSAGSAWHADSGTIHLHSAELKSNKKAGGDLVSNDSFQNF
                     DLKLEWKISQAGNSGILIYVQDDKPKYKETFHTGPEMQVLDDERHEDRKNPTHRAGSL
                     YDMIQATPGAVKPAGEWNQVEIVSNNGKLDFYLNNVHVVSTIMWDDNWKKMIAASKFK
                     EWPEFGTFQTGHIALQDHGNDVWYKNIRVKKL"
     gene            3320..6472
                     /locus_tag="VEV83_09135"
     CDS             3320..6472
                     /locus_tag="VEV83_09135"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HYK45319.1"
                     /translation="MRSRHYQVEKFTQEYSRLNENQKKAVDTIDGPVMVIAGPGTGKT
                     QILSARIGKILLETDAQPQNILCLTYTEAGAVAMRRRIQEFIGADAYKVNIYTFHAFC
                     NEVIQDNLGLFEKNSLDPISDLERIALFKQLIDSFRKDHPLKRYRSNAYIEISNLYAL
                     FSTMKREGWSPEFINQRIDEYLLSLPTRSEFIARRATTEFKVGDLRTDKIADETEKME
                     KLRAAVNEFENFQQLMRGRNRYDFDDMINWVIKAFEENKNLLLRYQEQFLYILVDEYQ
                     DTSGTQNRLVQLLINYWDKPNVFVVGDDDQSIYRFQGANVENMVSFADRYKNDLLTVV
                     LTHNYRSIPSILDVSKTIIDKNTERLVNRVEDLSKDLVSANIAINHLEHTPLIRRYET
                     QRHEMIHITRQVETILRQGVKPNRIGIIYKENKYGEELAQYFKLRKIPYHSKRSLNIL
                     AIPFAKKIISVLRYLACEHDIPFSGDELLFEILHYDWFKIPPMEIARISVEVADKHFT
                     TEKTSIRRLLSERSKLPMKDLFTQAIHPALKRASELIEKLIAKTPNVTLQNLFESIVR
                     EAGVLSHIMRSDEKIWLLQVLTGLFDFIKEETHRNPTLSLKQLVAVIDLMENENLTLP
                     LVEVSGSDKGVNLLTAHGSKGLEFEYVFFAGCNASFWEKKRKPWGGFKLPDNIFSSLS
                     ARAEFQGDDEELRRLFYVALTRAEQNLFISFSSYQNDGRELEPSMFVAEILDDHELPV
                     ETVFIDSDVQAEFQALHLEPEAPEIEKMEEEYLRALLERFVMNVSALNNYLRCPLEFY
                     FKNLVRIPSPKNDAIEFGSAVHYALEQLFRKMQQNNETFPPKEELIEDFEWHMRRHRE
                     SFTKEQFDRRMEYGEEVLAAYYNNYVFKWNKIVSIERNIKNVAMDGVPLKGKLDKLEF
                     VGKDANVVDYKTGDVDKARERLSPPNEKNPEGGDYWRQAVFYKILADNANRKWNVVST
                     EFDFVEPDKKKTYRKEKIFIRTEDITTVKQQIKTVWKKIQQHDFYTGCGKADCHWCNF
                     VKTNNMAVELHELTEEEAEL"
     gene            6560..7978
                     /locus_tag="VEV83_09140"
     CDS             6560..7978
                     /locus_tag="VEV83_09140"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYK45320.1"
                     /translation="MKRYFFAFNIIILIPAALLLYSCANIIPPGGGPRDTLPPVLLKA
                     APADSSLHFTGNKIILTFNEYVQLDNTLQTDLVVSPNPQQMPVVESKLQTVTVRLKDS
                     LAPNTTYSINFGKAIKDVNEGNPYKNFTYVFATGNTIDNGALNGRVQLAETGTTDSTL
                     IVILHKDLNDSAIKKERPFYYTRLDSAGRFNFRYLAYGTYAVYVLPNDFTKRYDDSTK
                     TFAFLNEPVVVDSSGPRTLTLYAYNEVEGSKTQSAPLPAETSTSTKRPPKDTAKSISY
                     TTTLQRTQQDLLSDLVIKFPKPLARFDSTKLSLNDTNFHPITGYTISADTSFSQFTLK
                     YPWKEEQFFRLLIQKDAFADSSGLTLAKDDTINFHTASEAEYGSIRLRFSNLDLSRNP
                     VLQFTENNKVVDSAALTSNEFFRTLYKPGEYGLRILYDTDKNMTWTPGSFEMKKQPEI
                     VVNVPRKITIKQNWDNEVNINL"
     gene            8044..8661
                     /gene="recR"
                     /locus_tag="VEV83_09145"
     CDS             8044..8661
                     /gene="recR"
                     /locus_tag="VEV83_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HYK45321.1"
                     /translation="MQFSSSLLENAVNEFARLPGVGKKTALRMVLYFLKQEVQEVESF
                     SETISRMRRDIKFCQRCHNVSDADICSICANSLRNQRIICVVENIRDVIAIENTQQFS
                     GTYHILGGVISPLDGIGPDQLQIESLISRLSKEQTEELVFALSPNIQGDTTIYYIQKK
                     MTHLPCRVTTIARGIAFGGELEYADELTLGRSLQNRMPVDRYISH"
     gene            8757..9164
                     /locus_tag="VEV83_09150"
     CDS             8757..9164
                     /locus_tag="VEV83_09150"
                     /inference="COORDINATES: protein motif:HMM:NF024275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45322.1"
                     /translation="MNWKKTTLIIIVVIAVAGLSYAYYIWNKPARDVADEQGIRITAE
                     AIFDSFTHNEQAANASFLNKAIEVTGKVTDVKKNQAGATVVYLQSSDPMFGVNCTFKN
                     DPGTITKGSMITFKGVCTGYLSDVVIDQGLLVK"
     gene            9212..9901
                     /locus_tag="VEV83_09155"
     CDS             9212..9901
                     /locus_tag="VEV83_09155"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HYK45323.1"
                     /translation="MKILRLGIVTGIGIILVFACKHEVFRPPDTGGNTGGDNEKDSVI
                     CFESQILPIFINNCAVSGCHDAATHEKGYVFTSYDGIMEGIEPGDPEHSKIFEAITSN
                     EKEDRMPKDTAPLPADQIGVIEQWINEGAHNTTNCFSGCDTSLYTYSAAVRPILDLNC
                     VGCHNNSLQNAGVNLTTYTGVHAVALDGRLSGVINWSVGYPQMPFGGEKLSNCNITQI
                     MKWIDDGAQNN"
     gene            9912..10313
                     /locus_tag="VEV83_09160"
     CDS             9912..10313
                     /locus_tag="VEV83_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45324.1"
                     /translation="MLRKTILAASIFLTGIVFLAGCYYDKKDLVYPPFYGNCDSVTTV
                     RYSVEITDILDKHCKSCHYGDGSVSGHNLYDYNTISGLALDGKYGSGSLLSAVSHDGG
                     NPNPMPQGAPKLSDCDINIIARWVDAGAPDN"
     gene            10347..>10608
                     /locus_tag="VEV83_09165"
     CDS             10347..>10608
                     /locus_tag="VEV83_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK45325.1"
                     /translation="MKRIITTLVLISGIFSAGKAQDYLTRNGNVSFYSHTALEDIKAQ
                     NNEAVSTLNSQTGDIEFKVAVKSFHFAKTAMEDHFNNSDYMNS"
BASE COUNT         3190 a         2215 c         2522 g         2681 t
ORIGIN      
        1 gctggtgaaa tggcttgaca agcccgctga agtttatcgt gccgggcaac cgtatctttc
       61 cgacgcggca aagcataata cgagaacacc gggcggacat cctgaagggt acctggaagc
      121 gtttggaaat atataccgga attttgcgca gagtttgatg tgtaaattac aggggagcga
      181 accgacagcg gagatgctgg attatccgcg ggtggaagaa ggcgtgaggg gaatggcgtt
      241 tatagataat gtggtggcat cgagccagag tgagaagaag tggacggagt ttgccatata
      301 aaacgaagat ttgattgggg ttatacggtt atcagatttt caagccatca ggttttgaaa
      361 gaaccgcaat tagttatagc tgaaatcaat tcacttgctg ggaatattat tcaaagttca
      421 aaaatgttat aaagtaaata cctccctcta gggaggacgg gagcgtttat atgacaacac
      481 ttaaaggtcc tgcaattttt cttgcacaat tcatgggcga tcaaccgccg ttcaatgatc
      541 tgagatcaat ttgcgaatgg gtaaaaagca tcggatttat tggcgtacaa attccaacgt
      601 gggatgcgcg ttgcattgat ctgcaaaaag cggcagaaag taagacatat gctgacgagc
      661 tgaaaggaac agtaagcgac tgcggattgg agatcacgga actttccacg cacctgcaag
      721 ggcaactcgt tgcggttcat cctgcttacg acacactctt tgatggattt gccgccgaat
      781 cagttcgcgg taatccgaaa gcaagaactg agtgggccat acaacaacta aagtgggcag
      841 ccaaagcgtc tcaaaatttg ggattggatg cgcatgctac tttcagcggt tcattgttgt
      901 ggcaaactgt ttatccctgg cctcagcgtc ctgcgggttt agttgaaact ggcttcaccg
      961 agttggctaa ccgctggctg ccgatattga attattttga tgaatgcgga gttgacgttt
     1021 gttatgaaat tcatccgggc gaagatctgc acgatggcgt gagctacgaa atctttttgg
     1081 agaaagtgaa tgatcatcca cgcgcttgtc tcttatacga cccttcgcat tttgttttgc
     1141 aatgcctcaa ctatcttgaa tacatcgaca actatcatga gcgtatcaaa atgtttcatg
     1201 taaaagatgc tgaatttaac cccacgggta aacagggcgt ttacggtggc tatcaaaact
     1261 ggatcgaccg cgccgggaga tttcgttcac tgggtgacgg gcaggtcgac ttcaagtcga
     1321 tctttagcaa gcttgcacaa tacgactaca agggatgggc cgtgctcgaa tgggagtgct
     1381 gtttaaaaca tccggaagat ggtgcaaagg aaggttctaa attcattcgc gaacacatta
     1441 ttcgtgtaac agaaaaagcg tttgacgatt ttgcagcaac tggtgcaaac gaacaactga
     1501 acagattggt actgggattg cagtgattcc gttattcttt gaaaacgaaa tcctcaaatc
     1561 ctttagatga aatgtttttt agttttagta gcctgtattt ttttcgcatg taactcaaat
     1621 cagccggata agagcggcat aaactcgaat cccaccgaca gtttaataaa taaaggagga
     1681 acaaacatcg attctgcgaa cgaaaccggt agccggctga tagcaggaaa tgattgtttt
     1741 acctgccacc gcatcgaaga aaaaaatatc ggcccatcgt acagagagat cgcgcggcga
     1801 tatagcttga accagggcaa tattgaaaac cttgcgcata aaataattac cggcggaaag
     1861 ggattatggg gacaaaacgc gatgacgccg caccccaatt tgccggagcc gcaggcagag
     1921 gagatggtgc ggtatatttt gtcgataaaa gattcagcgc aataaaaatt gttctttacc
     1981 tgctgcttaa taaatttgtc cgattgaatt aatcatcctc aaaagcatca gatgaaaaaa
     2041 tatcttctaa caattgcggt aataagcctg gttgtggcct gcggcaacaa cgcaagcaat
     2101 agcggcgcca atactgacac ttctgcaacc gcttccggcg caaacgacat ttccacgaat
     2161 ccggactatc aaaaaggcgt gcagcttatc gcatcaaacg attgccttac ttgccacaaa
     2221 gtggatgaaa aacttacggg tcctccctac cgggacgtgg cgaacaaata tgaaaacacc
     2281 gacgccaatg ttaagatgct ggccgaaaaa gttatcaaag gcggctctgg taattgggga
     2341 acggtgccga tgaccccgca tgctgcgtta tcagaagctg atgcggaagc aatggtaaaa
     2401 tatattttac tcctaagaaa taaatagtgg catgaacgca tggttgataa ttgctgctgc
     2461 aagtatcatc ggctcgtgta attctcaaac gtcaaacagt tcaatcgcgg cggatacgac
     2521 gtcaattgat tcagcgaatg aatcttcggc ggcggactcc ggctggacca gtttatttga
     2581 cggcacaacc ttgaatgggt ggcatcagtt cggaggcagt agtgcaggca gtgcctggca
     2641 tgcggacagc ggtaccattc atctgcattc tgcggaatta aaatcaaaca aaaaggctgg
     2701 tggcgacctg gtatcaaacg atagttttca aaattttgat ctgaagttgg aatggaaaat
     2761 atcacaagcc ggcaacagcg gcattctgat ctacgtgcag gacgataaac caaagtataa
     2821 ggaaacattt catacgggtc ccgaaatgca ggtgctcgac gatgaacggc atgaagatcg
     2881 aaaaaatcct acccatcgtg ccggaagttt gtacgacatg atacaagcga ctcctggtgc
     2941 ggtgaagccg gcaggcgagt ggaaccaggt tgagatagtc agcaataacg gcaagctcga
     3001 tttctacctg aacaacgtgc atgtggtgag cacgataatg tgggacgaca actggaaaaa
     3061 aatgatcgcg gccagtaagt tcaaagaatg gcccgagttc ggaacattcc aaacaggtca
     3121 cattgcctta caggatcatg gaaacgatgt ttggtacaaa aacatcaggg ttaaaaagtt
     3181 gtgattggcg caaataaaat caattggcag gatcattcct ttgttatttc tcatttctta
     3241 tttcttattc ctcatttcat agggataact ggtgcatatc gttacccggt tttggtacgc
     3301 tgagtgctaa ctttgagata tgaggagcag gcattaccag gtagaaaaat tcacccagga
     3361 atacagcagg ttaaatgaaa atcaaaagaa ggcggtcgac accattgacg gccccgtaat
     3421 ggtgattgca ggtccgggta cagggaagac ccagatcttg tcggcgcgca tcggaaaaat
     3481 tcttctcgag accgatgccc agccgcaaaa tattttatgt ctcacttata cagaagcagg
     3541 cgcggtggcg atgcgccgac gcatccagga attcatcggc gccgacgcat ataaagtaaa
     3601 catctacacc tttcatgcgt tttgcaacga ggtgatccag gataacctcg gattgtttga
     3661 aaaaaattct ctcgacccga tctccgacct cgagcggatc gcattgttca aacagctgat
     3721 agattctttt cgaaaagacc acccgttaaa acgctatcgt agcaacgcct acatcgaaat
     3781 aagcaaccta tatgctttgt tcagcacgat gaaacgtgaa ggatggagcc cggagttcat
     3841 caaccagcgc attgatgagt atcttctttc gttaccaacg cgcagcgaat tcatcgcgag
     3901 gcgtgcaacg actgaattta aagttggcga tctgcgtacg gataagatcg cggacgagac
     3961 ggagaaaatg gaaaagcttc gtgcggcggt gaatgagttt gagaacttcc agcaactcat
     4021 gcggggccgg aaccggtacg atttcgatga tatgataaac tgggtgataa aagcgtttga
     4081 ggaaaacaaa aatttacttc ttcgatacca ggaacaattt ttatatatcc tcgttgatga
     4141 ataccaggac accagcggaa cacaaaaccg tttggtgcaa ctgctcatca attattggga
     4201 taaaccaaat gtgttcgttg tgggcgacga tgatcaaagc atctatcgct tccagggcgc
     4261 gaatgttgaa aacatggtgt cattcgcgga tcgctataaa aatgatctgc tcaccgtcgt
     4321 gcttacccac aactaccgat ctattccatc gatcctggat gtgtcgaaaa ccataattga
     4381 caaaaacacc gaacggcttg tgaaccgggt agaagatctg agcaaggacc tcgtttctgc
     4441 caatatcgcg atcaaccatt tggagcatac tccccttatc aggcggtatg aaacacagcg
     4501 ccatgaaatg atccatatta caaggcaggt tgaaacaatt ttacggcagg gcgtaaagcc
     4561 aaacaggata ggcattattt ataaggagaa taaatatggc gaagaactcg ctcagtattt
     4621 caagctccga aaaataccat accacagcaa acgcagcctg aacattttgg cgatcccgtt
     4681 tgcaaaaaaa ataatatcgg tgctgcgata tcttgcgtgt gaacatgaca tcccctttag
     4741 tggcgatgaa ctgttatttg agatcctgca ctacgattgg ttcaaaattc cgccgatgga
     4801 aattgcccgg ataagtgtag aggtggctga taaacatttt acaactgaaa aaacttctat
     4861 ccggcgattg ttgagtgaac gcagcaaact gccgatgaaa gatctgttca cacaggcgat
     4921 ccacccggct ttaaaaagag caagcgaatt aattgaaaag ctgattgcca aaacgcctaa
     4981 cgtaacgctg caaaatctgt tcgagagcat cgtacgcgaa gcaggcgtat tgagccacat
     5041 catgcgcagc gacgaaaaaa tatggttgtt gcaggtgctc accggacttt ttgatttcat
     5101 caaagaagaa acgcaccgca acccgacgtt atcgctgaaa caattggttg ctgttattga
     5161 cctgatggaa aatgaaaacc tcaccttgcc tttagttgaa gtaagcggaa gtgataaagg
     5221 cgtgaacctc ttaaccgctc acggttcgaa aggattagaa ttcgaatatg tttttttcgc
     5281 gggctgcaac gcaagcttct gggagaaaaa aagaaaaccg tggggcggat tcaaattgcc
     5341 ggataatatt ttttcgtctt tgtccgcacg tgcggaattc cagggtgatg atgaagaatt
     5401 gcgaaggctg ttttacgtgg ccctgacaag agccgaacag aacttgttca tttccttcag
     5461 cagttaccaa aacgatggca gagagctcga gccctcgatg ttcgtcgctg aaattttgga
     5521 tgatcatgag ctgcccgttg agaccgtttt tatagacagc gatgtgcagg ccgaattcca
     5581 ggcgctgcat cttgaaccgg aagcaccgga aattgaaaaa atggaggaag agtatttgag
     5641 agcattgctg gaaagatttg tcatgaatgt ctccgcatta aataattacc tccgctgtcc
     5701 actcgaattt tattttaaga acctggttag aattccttcg ccaaaaaatg atgcgatcga
     5761 attcggatcg gctgtgcatt atgcgctgga gcagttgttt agaaaaatgc aacagaacaa
     5821 tgaaacgttt cccccgaaag aggaattgat cgaagatttt gaatggcata tgcgccggca
     5881 ccgcgaaagt ttcactaaag aacaatttga ccggcggatg gaatacgggg aggaagtgtt
     5941 agcggcttac tacaataact atgtatttaa atggaataag atcgtgtcta tcgagcgcaa
     6001 tataaaaaac gttgcaatgg atggtgtgcc attaaaagga aagctcgata aacttgagtt
     6061 cgttggcaag gatgcgaatg tcgtcgatta taaaacaggc gatgttgata aagcaagaga
     6121 acggttatca cctccgaacg aaaaaaatcc ggagggaggc gattattggc ggcaggcagt
     6181 attttataag atacttgcgg ataacgctaa caggaagtgg aatgtggtaa gtaccgaatt
     6241 cgattttgtt gagccagaca aaaagaagac atacaggaaa gaaaagatat ttatccgtac
     6301 tgaagacatc actacagtta agcagcaaat aaaaacggtg tggaagaaga tccagcaaca
     6361 tgatttctac acgggttgcg gaaaagctga ttgccactgg tgcaattttg ttaaaacaaa
     6421 caacatggcg gtagaactcc atgagcttac tgaagaagaa gcagagctgt gagcgtaagc
     6481 gtttttaaga tttagaggat tattgggaac gtaaacgggt gaaagagttt atgtttgaat
     6541 tttgtttaaa gtgcttcttt tgaaaagata ttttttcgcg ttcaacataa tcattctaat
     6601 tccggcagcc cttcttttat actcatgcgc gaacattatt ccacccggcg gtggcccgcg
     6661 agataccctg ccacccgtat tactaaaagc tgctccggcc gattcgagcc ttcattttac
     6721 cggcaacaaa attattctca cgtttaatga atatgttcaa ctcgacaaca cattgcaaac
     6781 cgatcttgtg gtttcaccga atccgcaaca aatgccggtc gtggaaagta aactgcagac
     6841 ggtaacggtt cgcctgaagg actcgctggc gcccaacaca acgtattcga taaattttgg
     6901 caaggcaatt aaagatgtga atgaaggaaa cccatataaa aacttcacgt acgtgttcgc
     6961 tactggcaac accattgata acggagcatt aaacggcagg gtgcagcttg cagaaacagg
     7021 cacgaccgac tcaacgctca ttgtaatact gcacaaagat ctgaacgatt cggccataaa
     7081 aaaggagagg ccattttatt atacgcggct tgatagtgcc ggcagattca atttccgtta
     7141 cctggcttat ggcacctatg cagtgtatgt tttgccgaac gacttcacaa aaagatacga
     7201 cgacagcaca aaaacatttg ctttcttgaa cgagcctgta gtagtcgaca gcagtgggcc
     7261 gcgaacctta accttgtatg catacaatga agtcgaaggt tcgaaaacgc aatccgcacc
     7321 gttgcccgca gaaacgagta catctacgaa aaggccaccg aaggatacag ccaaaagtat
     7381 atcgtacacg actacactgc aaaggacgca gcaggatctg ttgagtgacc ttgtcattaa
     7441 atttcccaaa ccactggccc gctttgactc aacgaaactc agtttaaacg acacgaattt
     7501 tcatccgatc accgggtaca cgatttccgc ggatacatcg ttcagtcaat ttacgttgaa
     7561 gtatccatgg aaagaggagc aattcttcag attgctgata caaaaggatg cgttcgcaga
     7621 tagcagtgga ttgacattag cgaaagatga tacaataaat tttcacacgg ccagtgaggc
     7681 agagtatggg agtattcgcc tgcgtttttc caatctcgat cttagccgaa accccgtgct
     7741 ccagtttacc gagaacaata aagttgttga ttcggcggcc cttacttcaa atgaattttt
     7801 tcgaacgttg tataagccgg gagagtacgg attacgcatt ctatacgaca ccgataaaaa
     7861 tatgacatgg actccgggca gttttgaaat gaaaaagcaa cctgagatcg ttgtgaatgt
     7921 tccgaggaaa ataacaatca agcagaactg ggataatgaa gtgaatataa atttgtgagt
     7981 tattttgttt gatgtttgaa gtttgaagtt taatgagcat ttgccattta gtatctttgc
     8041 cacatgcaat tttcttcttc acttcttgag aatgcggtta acgaatttgc gagactgccc
     8101 ggcgttggaa agaagactgc tttacggatg gtgctctact ttctcaagca ggaggtgcaa
     8161 gaggtcgaaa gtttcagcga aacgatctca agaatgcgcc gcgatattaa attctgccag
     8221 cgctgtcaca atgtaagcga tgcagacatt tgctctattt gtgcgaactc actccgcaac
     8281 caaagaatta tttgtgtagt cgaaaatatt cgcgatgtaa ttgccattga aaacacgcaa
     8341 caattcagcg gcacctatca tatcctcggc ggcgttattt cgccgttaga cggaattggt
     8401 cctgaccagc ttcagatcga atcacttatt tcccgtcttt caaaagaaca aacggaagag
     8461 ttggttttcg cattgagtcc aaatatccag ggtgacacga ccatctatta tatacagaaa
     8521 aaaatgacac acctgccgtg tcgcgtcacc accattgcgc gtgggatcgc gtttggtggt
     8581 gaactcgaat atgccgatga actcacgctg ggcagaagct tgcagaaccg tatgccggta
     8641 gacaggtata tttctcactg attttttaac accgtttttt tcctgctcag acaacaatta
     8701 ttccgattca acctgtttta ttttcattca aggccgaaca gtcaaacttt tgcagcatga
     8761 actggaagaa aacaacactc atcataatcg tagtgatcgc cgtcgcagga ttaagctacg
     8821 cctattatat atggaacaaa cccgcgaggg atgtagccga cgaacaaggc atccggataa
     8881 cggcagaagc tattttcgat tcatttacac acaatgaaca ggctgcaaat gcttcatttt
     8941 tgaataaagc aattgaggta accggcaagg tgacagatgt aaagaagaac caggccggcg
     9001 ctaccgtagt gtacctgcag tcttcagacc cgatgttcgg tgttaactgc actttcaaaa
     9061 atgatcccgg cacgattacg aagggaagca tgatcacttt taaaggagtg tgcacgggtt
     9121 atttgagcga tgtggtaatt gaccagggtc tgctcgtgaa ataggagttt caataaatcg
     9181 caaactcaac gctttagttt aaactggaaa catgaagatt ctacggcttg gtattgttac
     9241 aggtatcggc attattttag tttttgcgtg caagcacgaa gtgtttcgac cacctgacac
     9301 tggtggaaat acgggaggcg ataacgagaa agattccgtg atatgttttg aatcgcagat
     9361 attgcccata tttataaaca attgtgcagt gtcaggttgc catgatgcag ccacacatga
     9421 aaagggatac gtgttcactt cttatgacgg tattatggaa ggaatagagc ccggcgaccc
     9481 agagcacagc aaaatatttg aagccatcac atccaatgag aaggaggacc ggatgccaaa
     9541 agatactgct ccattgcctg ctgatcaaat cggtgttata gagcaatgga taaacgaagg
     9601 tgcccacaat acaacgaatt gcttctccgg ctgcgacact tctttgtaca cttattcggc
     9661 ggcagtgaga cccatcctcg atttaaattg cgtcggctgt cataacaata gtttacaaaa
     9721 tgcgggtgtt aacctcacaa cctatacggg agttcatgca gttgcgctgg atggccggct
     9781 ttccggtgtg atcaactgga gcgttggcta tccgcagatg ccattcggag gcgaaaaatt
     9841 gagcaattgt aacataacgc agatcatgaa gtggatcgat gatggcgctc aaaacaatta
     9901 aaaagtttac gatgttaaga aagacaattc ttgcggcttc aatttttcta acgggcattg
     9961 tttttttggc aggttgttat tatgataaga aggacctggt atatcctccg ttttacggga
    10021 attgtgattc agtaacaact gtgcgttaca gtgtagaaat aacggacatc cttgataaac
    10081 attgcaaaag ttgtcactat ggggacggta gtgtgtccgg tcataatttg tacgattata
    10141 acacaatctc tggccttgcc ttagacggta agtatggatc cggttctctt ttgtccgctg
    10201 tatcacatga cggcggaaac cccaatccaa tgccacaggg tgcacccaag ctttccgatt
    10261 gtgacataaa tataattgcc cgctgggtag acgcgggcgc acctgataat taactaaaca
    10321 gttcgaaacg ttttaaaata tttattatga aaaggataat cacaacgctc gtattgatat
    10381 ctggcatttt ttcggcaggc aaagcgcagg actatttaac ccgcaatggc aacgtctctt
    10441 tttattcgca tacagcgctt gaggatatta aagcgcaaaa taacgaggcc gttagtacgc
    10501 tcaattcgca gaccggcgat attgaattta aggtcgcagt aaaaagtttc cattttgcaa
    10561 aaactgctat ggaagatcat ttcaataatt ctgattacat gaattcgg
//
LOCUS       DASQJI010000329         3667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1264362,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000329 DASQJI010000000
VERSION     DASQJI010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264362"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1549)
                     /locus_tag="VEV83_09170"
     CDS             complement(2..1549)
                     /locus_tag="VEV83_09170"
                     /inference="COORDINATES: protein motif:HMM:NF022525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2779 domain-containing protein"
                     /protein_id="HYK45326.1"
                     /translation="MSPVTQTLSKSTFVRGCKCLKSLYLYKFHYNLRDEVSQQQQYLF
                     DQGHEVGELARSLFPGGEDATVIPAYDHKASVQRTRQIVESGYKTIYEAGFMHNDVYA
                     ASDILVIRKDGWYLYEVKSSTGVKEYYTLDAALQYYILNNLGYPVKQVNIVCINNQYV
                     KRGAIEPEKLFNIHDITADVIALQDYVSEQVETMQEMLKSGAEPTCKIGRQCSEFFSC
                     DFQGHCWKKVNEAQHPVTAISKIGDKLWELLNRNIYCQSQIPFEYYFRMTRLQRQQIF
                     CTLEETSPAPEFEEIREFLGGVSTPVSFLDFETIATAIPLFDGTRPYQQVPFQFSLHC
                     ADGTGEQVHYEFLGDGRSDPRPGLIRQLLAALPKKGSILVYYMPFERSRLLELGENFP
                     QYKKQLNAVAARLVDLIIPFRNRYVYHYKMNGSASIKSVLPALFPELNYSKLGISDGG
                     AASRAYLELSCLEDEEKRSSIRENLLEYCKMDTRAMVELYNYLKQVAATTRAKVVSMR
                     QTAGEVW"
     gene            complement(1813..2709)
                     /locus_tag="VEV83_09175"
     CDS             complement(1813..2709)
                     /locus_tag="VEV83_09175"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HYK45327.1"
                     /translation="MQMSAQGTIKRYQLILDKLRYNSYPSFEEMQRFLHEQGFEISRR
                     TLQRDIDAVRNEFSVSILFHRSRKGYYIDQEDSPGYGKLMKLIRLQSETEMLQQSLRD
                     EHEYISFEHQDEWSNIKWVQPLLDAIKHKKIVELSHFTFNREQPLQRRVEPYLLKEYQ
                     NRWYLLAINEEGEIRTYGLDRITDALVTTDTFAPRKDFDPHTYYANVIGLNHDGSKCE
                     EVVLAADPLTAKYMKSLKWHTSQEVHSENETEVVFRMYVQPNFELKQKILSYGGSIRV
                     LAPETLVKEIKRELKGTLKKYH"
     gene            2910..>3667
                     /locus_tag="VEV83_09180"
     CDS             2910..>3667
                     /locus_tag="VEV83_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK45328.1"
                     /translation="MKYIMATRRKFIQQSGTLALASLLAPGASRAAFFSGATSHSIGL
                     QLYTLGDLMLTDAKGTLQKLAAIGYKELESAGSKKGNFYGYTPKEFASMIKDMGMTWR
                     SAHVGGAPFNMDQIMKMAKSVDDSARIQKMMDDRKNWAKSLNLKENYQELADDAAEGG
                     LTYLVCSSIPVSTLDEIKTAVDVFSRTGEACKKVGVQFAYHNHTTEFDMVEGHRPFDF
                     ILSNTNKDLVKMELDLAWATKANQDPVELFKQHPG"
BASE COUNT         1006 a          837 c          800 g         1024 t
ORIGIN      
        1 ctcaccacac ctctcctgcc gtttgccgca tcgacacaac cttcgcgcgg gtcgttgctg
       61 caacttgctt gagatagtta tacagttcta ccattgcgcg cgtatccatc ttgcaatact
      121 caagcaggtt ttcacgaatc gatgatctct tctcttcatc ttccaggcat gacaattcta
      181 aatacgcacg cgatgctgca cctccgtcgc taatgccgag ctttgaataa ttgagttcag
      241 ggaacagcgc aggcagtaca gatttaatcg aagccgaacc gttcatctta taatgatata
      301 cataacgatt gcgaaaagga atgatcagat cgaccagcct ggcggcgaca gcattcaact
      361 gctttttgta ctgcggaaaa ttctcaccca attcaagcaa ccgtgatctt tcaaacggca
      421 tataatagac gagtattgat ccttttttcg gaagggccgc aagcaactgc ctgatcaatc
      481 ccggtcttgg atcagatctt ccatcgccca aaaattcata atggacttgc tcaccggtgc
      541 catccgcaca atgtaaactg aactgaaaag gtacttgctg gtaaggccgc gttccatcaa
      601 acaaagggat cgctgttgcg atggtttcaa aatccaggaa tgaaaccggt gtggatacgc
      661 cacccaaaaa ttccctgatc tcttcaaact caggcgccgg tgacgtttct tcaagcgtgc
      721 aaaagatttg ctgccgctga agtcgtgtca tcctgaaata atattcaaat ggtatctgcg
      781 attgacaata gatatttcga tttaaaagtt cccaaagctt gtctcctatc ttgctgatcg
      841 cggtcaccgg gtgttgtgct tcgttcacct tcttccaaca gtggccctgg aaatcacacg
      901 aaaaaaattc actgcattgc cggcctattt tgcatgttgg ttctgcgcct gacttaagca
      961 tctcctgcat tgtctccact tgttcggaaa cataatcctg caatgcaatc acatcggccg
     1021 ttatatcgtg aatgttgaaa agtttttccg gttctatagc tccgcgtttg acatattgat
     1081 tgttgataca aacaatgttc acttgtttta caggataacc cagattattc aggatataat
     1141 actgcaacgc cgcatcaagc gtgtaatatt ctttcacacc ggttgaactt ttcacttcgt
     1201 acaggtacca gccatctttt cggatcacaa gaatatcgga tgcggcatac acatcattat
     1261 gcatgaatcc ggcttcatag atcgttttat atcccgactc aactatttgc ctggtacgct
     1321 gtaccgaagc cttgtggtcg tacgcgggaa taacagttgc atcttctcct ccgggaaata
     1381 atgatcttgc caactcccct acttcatggc cctggtcaaa aaggtattgt tgttgctgcg
     1441 aaacttcatc gcgcaggttg taatgaaact tatacaggta aagagacttc aaacatttgc
     1501 atccacgtac aaaagtcgac ttactcagcg tttgggtgac aggtgacatc tttagcattt
     1561 tttcaaagaa acaccgcgac aacgccaaaa catgacgctg tgaacgttgg ctcaaatttt
     1621 tcgatcggct cgggaagtgc aggggtatgt tcgaagtacc gcagatatag atgtatggtg
     1681 aataaaacga ttgaaagcaa aagaggcggc cggtcgattt aaagataaaa aatgatattg
     1741 agcaattgaa aaagagaaat cagtagtaaa cgtattcaaa aacgctgagc ccgtattttc
     1801 aacgtccaca acctaatggt atttttttaa ggttcccttc aattcccgtt ttatctcttt
     1861 tacgagagtt tcaggagcaa gcacccgaat gcttccgcca tacgataaaa ttttttgctt
     1921 cagctcaaag tttggttgca catacattcg aaaaactact tcggtttcgt tttccgaatg
     1981 tacctcctgg gatgtgtgcc acttaagcga cttcatatat tttgcagtga gcgggtcggc
     2041 ggcaagcact acttcttcgc atttgctgcc atcgtggttt aaaccgatca cattagcata
     2101 gtacgtgtga ggatcgaagt ctttgcgcgg cgcgaatgtg tctgttgtaa ccagcgcatc
     2161 tgtgatgcgg tctaatccat acgttcggat ctcaccttct tcgtttattg caagcaggta
     2221 ccagcggttc tgatattctt ttagaagata aggttcaacg cgtcgttgca agggctgttc
     2281 acggttgaag gtgaaatgac tcaattcaac aatttttttg tgtttgatgg cgtcaagcaa
     2341 cggttgtacc cacttaatat tactccattc atcctggtgc tcaaagctga tgtattcatg
     2401 ctcgtcgcga agcgattgtt gcaacatttc ggtttcgctt tggagcctta tcaacttcat
     2461 cagcttgccg tacccgggcg aatcttcctg gtcaatataa tatcctttac ggctacggtg
     2521 gaacaagatc gatacactga attcatttcg tacagcatcg atatcccgct gcaaagtcct
     2581 tcgtgaaatt tcaaaacctt gttcatgcaa aaaccgctgc atctcttcaa aggaaggata
     2641 gctgttataa cgaagcttgt caagaattaa ctggtagcgt tttatcgttc cttgcgcaga
     2701 catctgcata aaggtagcga acgaatttta ctgtgattcc ggtgagccgg tgttccaaca
     2761 cctggcgagg aatattttca tcaacgcaaa acggcattat tcaaaatgat tcttcatccc
     2821 tgggaaaacc cgctttgagg tgaaccggga ggctcagaat tctcttacaa tttttttgta
     2881 agactgcaat atctttatca ttcactataa tgaaatacat catggcaacg agaagaaaat
     2941 tcatccaaca atctgggacg cttgcgttag caagtttatt agctcctggc gctagccggg
     3001 ctgcattttt ttcgggtgct acttcgcatt cgatcgggct tcaattatac acgctgggcg
     3061 atctaatgtt aacagatgca aagggaacgc tgcaaaagct ggcggccatc ggatataaag
     3121 agttagaaag tgccggatct aaaaaaggga acttctatgg ctacacgcca aaggaatttg
     3181 catcgatgat aaaggacatg ggaatgacgt ggcgttctgc tcacgtgggc ggagcaccat
     3241 ttaatatgga ccaaatcatg aaaatggcta aaagcgtaga tgattccgcg cgcatccaaa
     3301 agatgatgga cgaccggaag aattgggcaa agtcgcttaa cctgaaagaa aattaccagg
     3361 agctcgcaga cgacgctgcc gagggcggct taacttatct cgtttgttcg agcattccgg
     3421 tgagtacatt ggatgaaata aaaacggcag tggatgtctt cagcagaacg ggcgaggctt
     3481 gcaaaaaggt cggggttcaa tttgcgtatc acaatcatac aaccgaattc gacatggtcg
     3541 aaggccatcg tcctttcgat tttatccttt caaataccaa taaagatctt gtaaagatgg
     3601 agcttgatct tgcgtgggca acgaaggcga accaggatcc tgttgaatta ttcaaacaac
     3661 atcccgg
//
LOCUS       DASQJI010000330         9127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1880330,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000330 DASQJI010000000
VERSION     DASQJI010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9127
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1880330"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VEV83_09185"
     CDS             <1..519
                     /locus_tag="VEV83_09185"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HYK45329.1"
                     /translation="QSNLPMPKIEPSTLLKDVVKDSASLFVDNITTPEHETLQDDITA
                     AFKSIVPVLENAEHDGRLAWGQFKDGGITNLLKIPPFSRLHLDAGGGDNMINAFEKTH
                     GPSWRMIVELTDDINAYGVYPGGQSGNPGSKYYDDFIDTWAAGKYYRIHFYKKEEASQ
                     KNALGKIVFSKS"
     gene            551..895
                     /locus_tag="VEV83_09190"
     CDS             551..895
                     /locus_tag="VEV83_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45330.1"
                     /translation="MKFIVVLLVTALLGFTAPLYFTWWSFAITSFIVALFIHQKPLMA
                     FIAGFLSMFALWGILAILIDNANEHLFSHKIAEVLPLNGSSVMLIFITAFIAGIISGF
                     SSLSGSLARRAT"
     gene            923..2038
                     /locus_tag="VEV83_09195"
     CDS             923..2038
                     /locus_tag="VEV83_09195"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYK45331.1"
                     /translation="MANILDIIPYKILPAHMGGQKHIALFCKYLGRHNTVTGVSVKDN
                     EISEAENFKLIRLFSNSRSRYVNPFYVKKIRKIIRTANIDSIITEQPYMAWIAWVLKK
                     REGIKWFVHSHNIEYQRFKTLGKWWSPLMKLYEKWAYSSADAVFFITPEDLHFAIEHS
                     MVKSDNAILAPYGVEQEKMPNDSLESREIIFRRHNIPSGCTLILFNGALSYKPNADAL
                     RFILDEINPILLQNKSFEYRILISGKDLPDSFAHLKNYADKNVIYAGFVDDVVPYFKA
                     GDIFLNPITRGGGIKTKVVEAIGYGATTISCKTGAAGINLAVCGEKIHVVPDNDANAF
                     VKTILGICGAITTTPETYYAYYYWGNIIKRLQGVFDR"
     gene            2234..2638
                     /locus_tag="VEV83_09200"
     CDS             2234..2638
                     /locus_tag="VEV83_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK45332.1"
                     /translation="MNIYVGNLNWSLTSDDLYNLFSPYGEVTSAKIVTDKFNNNRSKG
                     FGFVEMSNDEAARQAISNLHDTEVGGRKIVVNESAPRKEGDSGYKKKSFGGGGGGGGY
                     NRGGGGGGYNRGGGGGGYNRNRGEGGGGYNRY"
     gene            2870..3364
                     /gene="accB"
                     /locus_tag="VEV83_09205"
     CDS             2870..3364
                     /gene="accB"
                     /locus_tag="VEV83_09205"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HYK45333.1"
                     /translation="MDYKQIQELVKLVNKSNIGELSIEEKDFKICIKQKEDQVQQTIV
                     SAPPVMQAHYPQQVSAPPATGQQTQTQLAPTQETTPAKTDNLITIKSPMIGTYYKRPS
                     PDKPVFVEVGDDIVPGKVLCIIEAMKLFNEIESEVSGKVVKILVDDASPVEYDQPLFL
                     VEPD"
     gene            3457..4794
                     /gene="accC"
                     /locus_tag="VEV83_09210"
     CDS             3457..4794
                     /gene="accC"
                     /locus_tag="VEV83_09210"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HYK45334.1"
                     /translation="MFKKVLIANRGEIALRVIRTCREMGIKTVAVYSTADKDSLHVRF
                     ADEAVCIGKPQSSDSYLNIPHIIAASEITNADAIHPGYGFLAENAKFSQICSDHGIKF
                     IGPTPDMISSMGDKITAKETMIKAGVPVVPGGEGLLANIEQAKSIAKQIGYPIILKAT
                     AGGGGKGMRVVWEEREMERAYNTAKAEAGASFKNDGIYMEKFVEEPRHIEIQVAGDQF
                     GTVCHLSERDCSIQRRHQKLVEESPSPFMTPELRDKMGEAAIKAASAINYESVGTVEF
                     LVDKHRNFYFMEMNTRIQVEHCVTEEVINFDLIKEQIKIAMGEKISGENYLPQMHAIE
                     CRINAEDPYNDFRPSPGRINVLNTPGGHGVRVDSHVYAGYVIPPYYDSMIGKLITIAR
                     TRDEAIDTMYRALSEYVIEGVKTTIPFHLQLMRNDDFRKGNFTTKFLESFEMQ"
     gene            4948..5583
                     /locus_tag="VEV83_09215"
     CDS             4948..5583
                     /locus_tag="VEV83_09215"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK45335.1"
                     /translation="MRKQLTIASCILFSGMMAFIACTDKTSSESTTDSSNDSLATSKM
                     NYGGFESQVKWGEHLVTIGGCNDCHTPKKMGPNGPENDMSLMLSGHPAQQPPPAFDSK
                     EAAAKGLIVTQSFTAWTGPWGTTYAVNLTSDSTGIGNWKEAQFVTALREKKWMGLDGT
                     RPLMPPMSMMPATLMTEDELKAIFAYLKTTPAIKNVQPAAMLLPPPAAPTQ"
     gene            complement(5861..8734)
                     /locus_tag="VEV83_09220"
     CDS             complement(5861..8734)
                     /locus_tag="VEV83_09220"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HYK45336.1"
                     /translation="MPLKNILILLMAGMYSCKTHFNEIDQHNVSIPEFRLEPELSTAG
                     NNLDAICAKGNELWAVGKDSIVHYNGKQWESQASGNANNLHAIYALGDEIWAVGGKGT
                     IIHYNGTQWESQESTTESGLEAICGQGDEIWAVGGKGTIVHYNGKQWESQNSTTQRRL
                     QAICAKGGELWAVGMGIIVHYDGKQWESETSIPESLLEAVYGKGDELWVVGHHGVVLH
                     YNGEQWEQQTSTTQSNLYAIYGRGNEIWAVGDNGTIVHYDGKQWQPQTSVIQNRLTAI
                     YENGDGLWAVGGAVLYSKDKNNWALIDEHDSKFLCTNNNVTWAGGRNGLRRIINTGKY
                     LPALAQINYETSTLNPYQIKVRLRFDSSISKEFNAQSGLSFEGLKKSDTGTTFKKITS
                     VIKTANDHSFETEIDTKQFGIDYESDVYNKLRLRLSFNYKGVVQHFDLKNSSTEPYLI
                     IKNDFLQKHATPVMVAMIIVAYYMILVLFYLFFPLQFLNVYKKFPLNKIIERLPNPFN
                     SVFIFLNILFPLSVLAYGKKTLNKWVEKNSQFISDKVLSTGLSVSRREYISVPVEIND
                     QTITEKPGRDLLPEILNKRRNIIQIIGEGGSGKTTLAIQLCKWITQNKALIKSNKFPF
                     IIDYDTHDVVKSIKEKINAWLPDENIEDDFVKALLKNQNIVLLVDALSELDVNTQNYV
                     DTIHSNVPANLLIITSRKRFSFQQLECAIIKPLPLTSDKLLYFLISYFNTKKETVAAN
                     LHQEMSAFPLKTMEEQLAFAGRIGVLFSNAVNAVSVTPILVKIIIDNFFKKFQQGNRS
                     FTDLMEDMPKSIPEVYYEYLENVNPKNKTVTNYLDTDIMFQLAELMGCLSLGNNFIPQ
                     DFSQQSYTEAVNKRFKDVNAVSTIQRFSDNGIITRKNNLGSFFLRFNLDPLAEYVAAA
                     YYYKLHKDAKTVDQFILKVSTMSDDSKGFKTAFTQIAEHFNQR"
BASE COUNT         2639 a         1955 c         1941 g         2592 t
ORIGIN      
        1 caatcaaacc tgccgatgcc gaaaatagaa ccgagcactt tacttaaaga cgttgtgaaa
       61 gattcagcat cattgtttgt tgataatatt acaacgccgg aacatgaaac actgcaggat
      121 gatataaccg cggcatttaa aagtatcgtg ccggtgttag aaaatgcgga gcatgatggt
      181 cgactggcgt ggggccaatt caaggatggc ggcatcacaa acctgcttaa gatacctccc
      241 tttagccgtt tgcacctgga tgcaggaggt ggcgacaaca tgataaatgc atttgaaaaa
      301 acgcacggtc caagctggcg aatgatcgtt gaattaaccg atgatataaa tgcttacggc
      361 gtttatccgg gcggacaaag cggtaatccc ggcagcaaat attatgatga ctttatcgac
      421 acgtgggctg ccggaaaata ctaccggata catttttata aaaaagaaga ggcgtctcaa
      481 aaaaatgcgc ttggcaaaat agtattcagt aaatcctaaa agtcagatcg ataaaaccga
      541 acggaattag atgaaattta tcgttgtttt attagtaacc gcattgcttg gttttacagc
      601 tccactgtat ttcacatggt ggagttttgc aataacatct tttatcgttg cattatttat
      661 tcatcaaaaa cctctgatgg ccttcattgc cgggttcctc agcatgttcg cactgtgggg
      721 cattctcgca atcctgatcg acaatgcgaa tgaacacctg ttctctcata agatagctga
      781 agtacttcct ttgaacggct cctctgtcat gctgatcttt atcacggcct tcatcgccgg
      841 gatcatttct ggcttctcat cgcttagtgg cagcctcgcg agaagagcca cataatcctt
      901 aatttgccct cttcacgact cattggcaaa catcctcgac atcataccgt acaagatcct
      961 tccggctcat atgggcgggc aaaaacacat tgctcttttc tgcaagtacc tcggtcggca
     1021 caatacagtt accggagtat cggtaaaaga caacgaaata agcgaagcag agaatttcaa
     1081 gctcatccgg ttattcagca attcacgatc gcgatatgta aacccgtttt atgtaaaaaa
     1141 gatccggaaa ataattcgaa cggcaaacat tgacagcatt attactgaac agccttacat
     1201 ggcgtggatc gcctgggtgt tgaaaaaacg ggaaggcatt aaatggttcg tccattctca
     1261 caacatagaa tatcaacgct tcaaaacgct cggcaagtgg tggtctcccc tgatgaaatt
     1321 gtatgaaaag tgggcataca gttctgccga tgctgttttt tttatcacgc ctgaagatct
     1381 ccactttgcg atcgagcatt caatggtaaa gtccgacaac gctatcctgg cgccatatgg
     1441 agtggagcag gaaaagatgc ccaacgatag tctagaaagc agagagataa tatttcgccg
     1501 acataatatt ccgagcggat gcactcttat ccttttcaat ggcgccctct cttacaaacc
     1561 gaacgccgac gctttgagat ttattctcga cgagataaat ccaatcttgt tgcaaaacaa
     1621 aagtttcgaa taccggattc ttatttccgg caaggacctt cctgactcat ttgcacattt
     1681 gaaaaattac gcggataaaa atgttatata tgctggcttt gtagatgatg tagttcctta
     1741 ttttaaggcc ggcgatattt ttttgaatcc aataacaagg ggtggcggaa taaaaacaaa
     1801 agttgtagaa gcgatcggtt atggcgccac gaccatctca tgtaagactg gagcagccgg
     1861 cattaatttg gctgtctgcg gtgaaaaaat tcatgttgtg ccagacaatg atgccaatgc
     1921 ttttgtaaag actattttag gcatttgcgg ggcgataacg acaacgcccg agacttatta
     1981 tgcatactat tattggggca atattattaa gcgactacaa ggggtgtttg accgataacc
     2041 agtggaaaag ctatcgtatc cggggcagca ggaatttttt agaaccattt gatgcgccca
     2101 ataaattttt ttcccatatt ttcgcaatcc agatgttaca gttagtccat ttttgcctga
     2161 acgtttccgc gtaaatgttt ttggtttttg ggtttctgtt ttcattgact tttattcata
     2221 aaacaatttc gagatgaaca tttacgtagg caacttaaac tggagcctca ccagtgacga
     2281 cctttacaac cttttttccc cttacggcga agtaacgtcc gctaagatcg ttaccgacaa
     2341 gttcaacaac aaccgaagca aaggatttgg tttcgttgaa atgagcaatg atgaagcggc
     2401 acgccaggcg atcagcaacc ttcatgacac cgaagtaggc ggccgtaaga tcgtcgttaa
     2461 cgaatcagct ccccgcaaag aaggcgatag cggctacaaa aagaaaagct tcggcggtgg
     2521 cggcggcggt ggtggttata atcgcggcgg cggtggcggc gggtacaacc gtggcggtgg
     2581 cggcggtggc tataaccgca atcgtggcga aggcggcggc ggctacaacc ggtattaacc
     2641 tgtgcaggtc tcaaacgcat ttcattcaat agcgatattg aatgtataag aagttccgtg
     2701 tttcatggaa cttcttttgt ttttgagcat ttttaggtga atgacggccg atttttattt
     2761 ttttaaaacg agggcatttt aggcgaaaaa atcctggatt tttgtaattt ttagctactt
     2821 tgcttcccct tttggccaaa aacgcacgaa acaccccaaa aactaaatta tggattataa
     2881 acaaattcag gagcttgtta agcttgtcaa caagagtaat atcggggaac tgagcattga
     2941 agagaaagac ttcaaaatat gtatcaaaca aaaggaagac caggtgcagc agaccattgt
     3001 gtcggcaccg ccggtgatgc aggcacatta tcctcagcag gtttcagcgc cgcctgctac
     3061 gggccaacaa acgcaaacac aactagctcc cacacaggaa acaactccgg ccaagactga
     3121 caatttgatc acgataaaaa gcccgatgat aggcacgtac tataagaggc cgtcacccga
     3181 taaaccagtt tttgtagaag ttggcgacga catcgtacct ggaaaagttc tttgcattat
     3241 tgaggccatg aaactgttta atgagatcga aagcgaagta agtggtaagg ttgtgaaaat
     3301 tttggtagac gatgccagcc ctgtggaata tgaccaacca ctctttttag tagaacccga
     3361 ttaatttgaa agggactgtg ctctgagatc caaaagtcga tcgacttgtg gatcgccctg
     3421 atttcaaatt tactgttcaa attttcaaag aagaaaatgt tcaaaaaagt actgatagcg
     3481 aatcgcggcg agatcgcttt acgcgtgata cgaacatgca gggaaatggg catcaaaaca
     3541 gttgcggttt attctacggc agataaagac agcttacatg ttcgcttcgc cgatgaagca
     3601 gtgtgcattg gcaaaccaca aagcagcgac tcatacctca atattccaca cattatcgcc
     3661 gcctcagaga tcacgaacgc cgatgcaatt catccgggct atggctttct tgctgagaac
     3721 gcaaagttct cgcagatatg ttcagaccac ggtataaaat tcataggtcc cacgcccgac
     3781 atgatcagtt cgatgggcga taagatcaca gcgaaagaaa cgatgataaa ggccggcgtt
     3841 cctgttgtgc ccggcggaga aggtctgctt gcaaatattg aacaggcgaa atcgatcgca
     3901 aaacagatcg gttatcctat tattttaaaa gccacagccg gcggaggcgg gaaaggcatg
     3961 cgcgtggtgt gggaagaacg ggaaatggaa cgcgcctata atacagccaa agcggaggcc
     4021 ggagcttcgt tcaagaatga tggcatctac atggagaaat ttgttgaaga accaaggcac
     4081 attgaaatac aagtcgcagg tgaccaattc ggaacagttt gccatttaag cgaacgcgac
     4141 tgctccattc aacgccggca ccagaagttg gtcgaagaat cgccatctcc ttttatgact
     4201 cccgagcttc gcgataaaat gggcgaagcg gcgatcaaag cagcttctgc tatcaattat
     4261 gaaagtgtcg gtacggttga attcttagtg gacaagcacc ggaactttta tttcatggag
     4321 atgaacaccc gcatacaagt tgagcattgc gttaccgaag aagtgatcaa cttcgacctg
     4381 ataaaagagc aaataaagat cgcgatgggt gaaaagatct ccggcgaaaa ttatttgcct
     4441 caaatgcacg ccatcgaatg ccgcatcaac gcagaggatc cgtataatga tttccgtcct
     4501 tcgccgggtc gcattaatgt gctgaacaca ccaggaggcc acggtgttcg cgttgatagc
     4561 cacgtgtacg ccggctacgt catcccgccg tattatgatt ctatgatagg taagttgatc
     4621 accatcgcaa gaacaagaga cgaagcgatc gatacgatgt accgcgcgtt aagcgagtac
     4681 gtaattgagg gcgtgaaaac cactatccct tttcaccttc agctaatgcg aaacgacgat
     4741 ttccgcaaag gaaattttac tacaaaattt ttggaaagtt ttgaaatgca atgatggagc
     4801 ttaaaacaaa agttcgcaac aaccggggat gcggcatgaa tagtccgatt cacaggaaat
     4861 tttaaataaa cacgccagag tgtaaattaa tttttatctt atcgcgcttt tccgttttaa
     4921 acaattctac atcaaaaaca acgccttatg cgaaaacaat taaccattgc gagctgcata
     4981 cttttctcag gtatgatggc attcatcgca tgcactgaca aaacttcttc cgaaagcaca
     5041 actgattcaa gcaatgattc attagcgacg tcaaaaatga actatggcgg ttttgaaagc
     5101 caggtaaagt ggggcgagca tcttgttact atcggcggct gtaacgattg ccacacgccc
     5161 aaaaaaatgg ggcctaatgg accggaaaac gatatgagcc tgatgctttc aggacatccg
     5221 gcccaacaac ctcctcctgc gtttgattcg aaagaggcag cagcgaaagg gcttattgtt
     5281 actcaaagtt ttactgcctg gacgggcccg tggggaacaa cttatgcagt aaaccttaca
     5341 tccgactcaa cgggtattgg caattggaag gaagcacaat ttgtaacagc gttgagagaa
     5401 aaaaaatgga tgggtcttga tggtaccaga ccgctgatgc cacctatgtc aatgatgccc
     5461 gctactttaa tgaccgaaga tgaattaaaa gccatttttg cgtatcttaa aacaacgccg
     5521 gcaattaaga atgttcaacc agcggccatg ctacttcctc ctcctgccgc accaacgcag
     5581 taatcattta ttctgaaata tttttgaaag aggaattatg agttcctctt ttttattctt
     5641 ttctccgctg cgcatttctt ttgtgggaat tgtgagcgga agttgatgta ctctgaaaaa
     5701 gccgaagcag tggcacatgt tattttatca acacggctgc aggcatttca ccaatgcacc
     5761 acaccaaatt actgtgtata ttcccatttc aaattaagtt gtgtttgact ggaatgaatg
     5821 cgaacagaca atcaggacag gaattttttg aacaacagtt tcaacgctga ttaaaatgct
     5881 ctgcgatttg ggtgaaggcg gttttgaaac cttttgaatc atcgctcatt gtactgactt
     5941 ttaaaataaa ttgatcaacg gtcttggcgt ctttatgcaa tttataataa taagcggccg
     6001 caacgtattc ggccaacgga tcaaggttaa agcgcagaaa aaaacttcca agattatttt
     6061 tcctggttat gatgccgtta tctgaaaatc gttgtatggt gctgacagcg ttgacatctt
     6121 taaacctttt attcaccgct tccgtgtaag attgttggga aaagtcctgc ggtataaaat
     6181 tattacctaa ggacaggcag cccattaatt cggccagctg aaacataatg tctgtatcca
     6241 ggtaattagt taccgtttta tttttcgggt tcacattttc gagatactca taatacactt
     6301 ccggtatgct cttaggcata tcctccatca ggtcagtgaa acttctgtta ccctgctgaa
     6361 attttttaaa aaaattatca ataatgattt tcacaagaat tggtgtaact gaaaccgcat
     6421 tgactgcatt actaaacagc acccctatcc tgcctgcgaa tgcaagttgt tcttccatcg
     6481 ttttcaacgg gaatgcggac atttcctggt gaaggtttgc agccaccgtt tccttttttg
     6541 tattgaagta agaaatgaga aagtacaaaa gcttgtctga ggtcaacggc aaaggtttta
     6601 tgatcgcgca ttctaattgc tgaaacgaaa atcttttcct tgaggtaata attaaaagat
     6661 tcgcaggaac attactgtga atagtgtcga cgtaattttg ggtattcacg tctaattctg
     6721 ataatgcgtc caccagtaaa acaatatttt gatttttcag caacgctttg acaaagtcat
     6781 cctcgatatt ttcgtcgggc aaccacgcat ttattttttc ctttattgat ttaacgacat
     6841 cgtgcgtatc atagtcaata ataaatggaa atttatttga tttgattaaa gctttatttt
     6901 gggttatcca cttgcacagt tggatggcaa gcgttgtttt ccccgaaccg ccttcgccaa
     6961 taatttgtat aatatttctt cttttattta gaatttccgg caataggtcc ctgccgggtt
     7021 tttcagtgat cgtctggtca ttaatttcta caggtaccga aatatattcc cttctcgaca
     7081 ctgataatcc cgttgacagc accttgtcgg atatgaattg cgagttcttt tctacccatt
     7141 tgttcaatgt ttttttgcca taagccagca ccgaaagtgg aaacagtatg ttcaaaaaaa
     7201 taaatactga attgaacggg ttaggtagcc tttcaattat tttgtttaga ggaaattttt
     7261 tgtagacatt aagaaattgc aaagggaaaa ataaataaaa caaaaccaga atcatgtaat
     7321 aggcaacaat gatcattgcc accatcaccg gtgtcgcatg cttctgcagg aaatcatttt
     7381 ttattatgag gtatggttct gttgatgagt ttttcagatc aaagtgctga acaactcctt
     7441 tgtagttgaa acttagtctt aaccgtagct tgttataaac atcagattca taatcaatcc
     7501 caaattgttt tgtgtcaatc tccgtttcga atgaatgatc attcgccgtt ttaattaccg
     7561 atgttatttt tttaaaagta gttccggtgt ctgatttttt taaaccttca aaagacaagc
     7621 cggattgcgc attgaattcc tttgagattg aactgtcaaa ccttagccgt accttgattt
     7681 gataaggatt aagtgttgac gtttcataat ttatttgagc caaagcgggc aaatatttgc
     7741 cggtattaat aattcgccgc agaccattac gacctccggc ccaggtaaca ttattgttcg
     7801 tgcataggaa ctttgaatca tgttcgtcta tcagggccca attatttttg tcttttgaat
     7861 ataaaactgc accgcctact gcccataatc catcgccatt ttcatatatc gccgtaagac
     7921 gattttgtat tacactcgtt tgtggctgcc attgtttgcc atcataatga acgatcgttc
     7981 cattgtcacc cactgcccaa atttcattgc ctctaccata aatcgcatag agattacttt
     8041 gtgttgtact ggtttgttgc tcccattgtt cgccattgta atgaagcaca acaccgtgat
     8101 gacctacgac ccatagttca tcgccttttc cataaactgc ttcgagaaga ctttctggta
     8161 tactggtttc tgattcccat tgtttaccgt cgtagtgaac tataatgccc atacccacgg
     8221 cccataattc gccacctttt gcacagatcg cctgcagacg cctttgcgtt gtactgtttt
     8281 gcgattccca ttgtttgcca ttgtaatgca cgattgtgcc cttgccaccc acagcccaga
     8341 tttcatcgcc ctgaccgcaa atcgcttcca ggccactttc tgttgtactt tcttgcgatt
     8401 cccattgtgt gccgttataa tgaatgatcg tgcccttgcc acccacagcc cagatttcat
     8461 caccgagtgc gtaaatcgca tgaagattat tcgcattacc gcttgcttgt gattcccatt
     8521 gtttgccgtt ataatggaca atagagtctt ttcctacggc ccacaattca ttgccttttg
     8581 cacaaattgc atcgagatta tttcctgcag tacttaattc gggttccaat cgaaattccg
     8641 ggatagaaac attatgctga tcaatttcat taaaatgcgt tttacaggaa tacatcccgg
     8701 ccatcaggag tatcaatata ttcttaagcg gcataaaaaa tagcgggcga agttgatcag
     8761 gataaagata gaaataaaaa ataccttttt agattttcag tctcccgtat caggattcaa
     8821 gtcagttctg cttcctcgtt ggccacgatt ggctcctcaa acagataagt ttggaaagac
     8881 gtatttcacc ggtaccctgc aatgacctgg ttgttacacc cgtttatatg cgcccgggcg
     8941 ctacctgcta aggcgatata aggaaggaaa ccgcaggagt acaaataaaa taaggttgta
     9001 atattgctcg tttgttctgt tacgctaacg ttaattcagt tttgaaatta gtatatttct
     9061 tattttcaaa cctttcttac agattcagca aaattttgtc gtggtaatgc gcagaagatc
     9121 agtactg
//
LOCUS       DASQJI010000331         5160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2494518,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000331 DASQJI010000000
VERSION     DASQJI010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2494518"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2901)
                     /locus_tag="VEV83_09225"
     CDS             complement(<1..2901)
                     /locus_tag="VEV83_09225"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HYK45337.1"
                     /translation="MKKIYTVLIQSFSKLLQRVLAKGVFFLLLVTIFVVTCEHAMAQI
                     ARRGSTTTATKAGGTGTTLIINKPTGVVQGDVMIFTFSGLRTSYPSSPGWTVIKQGQY
                     TPDFVNGLADGVAIAFYKVAGAAEPANYTFSVTAGAAAVGAIMAFSGVDVTWPTPFDA
                     VPPELYKVFANVAHANSITTANSDAAVLMLVMSQATRSYSSWSATSPSSLAEILDANV
                     TNSANNDQTSIGGAWALKPVPGATGTGNVSMSGISETYGLFLALRRNPPPPTITSFSP
                     SSGPVGTSVTITGTNFNSDITQNSVYFGAAKAIVTAATSTSLTVTVPPGSTYENISVC
                     DTRHNTTGFSSRPFIVTLDEGAITFNPKTKVYEGFPYGITAADVDGDGLTDLVSPSGG
                     NLLILPNSSSNGNLSFNSPVVLTVGSFPYAVAFKDINGDDKADLIVANKDADNVSVFK
                     NTSQPGNISFAAKQDFAVGTGPHSIAVSDLDGDGKADIVTANTLANTVSVLRNTSQFG
                     VISFATKIDYATGLEPYWVRIGDIDGNGKADIVFANYASSNISVLRNTSTVGVLAFAA
                     RVNFTTGSFPRAVALGDIDGDGKLDIAVANYNSNTMSVFRNTSPSGSITMAARADFAA
                     SGGPSCVAIGDVDGDGKPDLAVTNEIANTVSIFKNNSTSGVLSIAAPSDFVTPAKPQE
                     VVVCDINKDGKPDLSVQDIGVGQISVLTQVCNLPAITSVLPIQASPGSTVTISGSNFS
                     NGGTVSFGGAAMQVTSWSKTSIQATLPANVYGGNIAVTNQCLSTGSFAYTIPPKITSF
                     SPESGAIGSSVTISGINFNTTPSQNIVFFGAVKAVVTAATATSLTVTVPAAANYQYIS
                     VTNVGGNVTAYSSKPFIVTLNGAITFKNKVNFATNTSPSPAASADFDGDGKPDLVVGN
                     SNSTVSVLRNTSLNGIINFDSKADFTTAVANVDVTVADLDGDGKPDLASGVSA"
     gene            3524..>5160
                     /locus_tag="VEV83_09230"
     CDS             3524..>5160
                     /locus_tag="VEV83_09230"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45338.1"
                     /translation="MWFATKDGLNQYDGYHFKIYRHDAEDSTSLADNYVETIMEDSKG
                     RLWVGTSSGYLDIFHHESGTFEHIQFTTGKQGEQKQGTVYQITEDTRKNIWVLCSNGL
                     FIIRLDNHDKNATYSVKQLPVPSSSIDMSLVVSKNGAVYFADGLKPQVYILDQRSNQW
                     FPLPAVNRFLTANSHNEPPMIYNLLEDTETNKLYAFSNIGIIRFDKPSVPQLISSEPM
                     GFSYRQFFLDRNRNVWFLGNNKIGILNIDSRQTRYLAPMDEQDTIKLGMTHSMFMDLS
                     GMIWVGTKGYGLMTLDTRAQLFHHKDNASVAMIVETDDGRLGVNDGMASFQIIDPSTG
                     DCIDTIPVTEGKIYFESFNEFSHPLLRGSKQLLWFADEKRLACYNKITKQHIFYPLPV
                     AQKSGNYQLVSDLKEDPAGNIWVSTTDGLLCFLTSNYSWKIYKNDPNNKTSLSFNAIF
                     SLCFDPVNPKKYLWIGTNGGGINCMDIATGKCIRYSVKDGLPNNVIYGILPDDDGNLW
                     MSTNKGLSCFNPVKRTFKNYEEKDGLQSNEFNHNAYC"
BASE COUNT         1458 a         1138 c         1167 g         1397 t
ORIGIN      
        1 ggccgaaaca cctgaagcaa ggtcgggttt gccatcgccg tcgagatcag ccacggtgac
       61 atccacattg gcaacagcgg ttgtaaaatc agctttacta tcgaaattta taataccgtt
      121 cagcgacgta tttcgcaaca ctgaaacggt tgagttagaa ttgccaacca caaggtctgg
      181 tttgccatcg ccatcaaagt ctgctgatgc tgcaggtgag gggctcgtgt ttgttgcgaa
      241 atttacttta ttcttaaagg tgatagcccc gttcaatgtt acaataaatg gttttgaaga
      301 ataggctgtc acgtttccgc ccacatttgt gaccgaaata tattggtagt tagcggcagc
      361 cggtacggtt accgttaaac tcgtggcggt cgcggcggtt acgactgcct ttaccgctcc
      421 aaaaaatacg atgttctgag aaggcgtcgt attaaaatta atacctgaga tagttacact
      481 gcttcctatt gctccactct ccggagagaa ggaagtgatt ttcggaggaa ttgtgtacgc
      541 aaaacttcct gtagaaagac attggtttgt cacagcgata tttccgccat acacatttgc
      601 aggaagtgta gcctgtatag atgtcttgct ccagcttgta acctgcatgg cagctccgcc
      661 gaaactaaca gttccgccat ttgagaaatt ggatccggaa attgttactg tactgcccgg
      721 cgaagcctgt attggcagaa cggaagtgat tgccggcaaa ttacaaacct gcgttagcac
      781 ggatatttga ccaacaccta tatcctggac acttaaatca ggtttcccgt ccttattaat
      841 atcgcaaaca acaacctcct gcggcttggc gggagtaaca aaatcagaag gcgccgcaat
      901 actcaacact ccggaagttg aattgttttt aaaaattgac accgtgtttg caatttcatt
      961 ggttacagca aggtccggct tgccgtcgcc atctacatcg ccaatagcaa cacagcttgg
     1021 tccgcccgat gcagcgaagt cggcccttgc tgccattgtg attgagccac tgggagaggt
     1081 atttctaaaa acagacatcg tgttgctgtt gtaattagca accgcaatat ccagtttgcc
     1141 atcaccatca atatctccta aagcaaccgc gcggggaaat gagccggttg taaagtttac
     1201 cctcgccgcg aaagctaaga ctcctaccgt agatgtattt ctaagtacgg aaatgtttga
     1261 gcttgcatag ttagcgaaaa caatatctgc tttaccattt ccatcaatat cgccaatgcg
     1321 tacccagtaa ggttcaaggc cggtagcgta gtctattttc gttgcaaaac ttattacacc
     1381 aaactgcgaa gtatttcgca atacggatac tgtatttgca agcgtattgg cagttacaat
     1441 atctgctttg ccatcaccat ctaaatcact aacggcgatt gaatgaggcc ccgtgccgac
     1501 agcaaaatct tgtttagcag caaaacttat gttccctggt tgagaagtgt tcttaaatac
     1561 tgaaacgttg tctgcatctt tatttgcaac aatcagatcc gctttatcat caccattgat
     1621 atctttaaaa gcaaccgcat acggaaatga tccgactgtt aaaacaaccg ggctattaaa
     1681 agaaagattg ccatttgacg aactgttagg aagaatcaaa agattgcccc cacttggaga
     1741 taccaggtcg gtaagaccat cgccgtcaac gtcagcggcg gttataccat aggggaagcc
     1801 ttcgtatact ttagtttttg gattaaatgt aatggcgcct tcatcaagcg taactataaa
     1861 aggcctggat gaaaagcctg tggtattatg gcgtgtgtcg catactgaga tgttctcgta
     1921 agttgagccg ggcggcacgg tgacagtgag acttgttgat gtggccgccg tgacgattgc
     1981 ttttgcggca ccgaaataca ctgaattctg cgttatatcg gaattaaagt tggttccggt
     2041 tattgtaaca ctcgtaccaa ccggtccact tgagggtgaa aacgacgtga tagttggtgg
     2101 aggcggatta cgtcttaatg caagaaataa accatacgtt tcagaaatac cactcatgct
     2161 tacattccct gtgccggtag cgcccggtac aggttttaaa gcccaggccc cgccaatcga
     2221 agtttgatcg ttattcgcgg agtttgttac gttggcatct aggatttctg caagggatga
     2281 aggagaagtt gctgaccatg aggagtatga tcgcgtcgcc tggctcatca ctagcatcaa
     2341 aacagcagcg tccgaatttg ctgtagttat gctgtttgcg tgggctacgt tagcaaatac
     2401 tttgtaaagc tccggcggca ctgcatcaaa aggagttggc caggtaacat cgacgccgga
     2461 aaacgccata atcgcaccta ccgccgccgc ccctgctgtt acgctaaacg tataatttgc
     2521 aggctcggcc gccccagcta ctttataaaa agcaattgcg acaccatctg ccaggccatt
     2581 cacgaaatca ggagtgtatt gcccctgttt aataacagtc catcccggtg atgaaggata
     2641 gctggtcctt aatcctgaaa atgtgaatat cattacatct ccctgcacga ctcccgtggg
     2701 cttattaatg ataagcgttg taccggtgcc tcctgccttc gttgcagtag tggtgctacc
     2761 ccttcttgca atttgcgcca tggcgtgctc gcaggtcacc acgaaaatgg tcaccaataa
     2821 caaaaaaaat actcctttgg caagcactct ttgtaacaac ttgctgaacg actgaattag
     2881 gacggtgtat atctttttca tgacgaatgg ttttttagaa tgatttttaa aagcagtgtg
     2941 gggtattatt ttcaattggg tacatttagt ttcggtgatc aaaaaaattg gcgaaacaaa
     3001 tgttggatgt ttcaaggcat gaaaaaatcc ctaaactcag gcaacagcag gcaagagcct
     3061 acctaatatt agggaggcga ggcaaatgtg agaggtgaaa tgagagatga gatgcttaaa
     3121 gcggtgagac gtgcttcccg ccattagacc gattggaggt tgtggctaca gatggctttt
     3181 cgttgaagag ggttaccgga tgccttcgag gcgcccggtc gcacccgcgc gcgtttcaac
     3241 ttatttattt agctttatcg cgactgctta aaattcttgt tattattcgt taaagccgaa
     3301 cgtaccaaaa ctaaccgtga tcctgaagtg tggattttct aaacgtgttt ttgcaaagac
     3361 gatcttatcg ttcgtaatta cctgtactta cttaactatt ttttcttggc gggtagttgc
     3421 acaatccgcg ccagcgcaaa gcgtcgcctt ccaaagtcta accatcaacg atggcctttc
     3481 acagggcatg gtaaataaaa ttctgcagga caaatatggc tttatgtggt tcgccacgaa
     3541 agatggtttg aaccagtatg acggatatca tttcaaaata tatcgtcatg acgctgaaga
     3601 cagcacctcc cttgcggata attacgtgga aacgatcatg gaagattcta agggcagact
     3661 gtgggttggc acgtcttccg gttacctcga catctttcat catgagagtg gaacatttga
     3721 gcatattcag ttcacaacag gtaagcaggg tgagcaaaag cagggtacgg tgtatcaaat
     3781 aaccgaagac actcgaaaga acatttgggt tttatgcagc aatggtctct tcattattcg
     3841 acttgacaac catgataaaa atgcaacgta ttccgtaaaa caattacctg tcccgtcttc
     3901 gtcgatcgac atgtctctgg tcgtttcaaa aaacggcgcc gtctattttg cagatgggct
     3961 taagccgcaa gtttacatac tcgatcagcg ctcgaatcag tggtttccat tgcctgcggt
     4021 taaccgcttc ctaacagcga atagccacaa cgagccgccg atgatctata atttacttga
     4081 agacactgag accaacaaat tatacgcatt ttctaacatc ggtataatcc ggtttgataa
     4141 accttctgtt ccgcaattga tatcatcaga gcccatgggt ttctcgtaca ggcaattttt
     4201 tttagatcgt aacaggaatg tatggtttct cggcaataat aaaatcggaa tactcaacat
     4261 cgatagccgg caaacccgtt acctggcacc tatggatgaa caggacacaa taaaattggg
     4321 catgacccac agcatgttca tggatttgag cgggatgatc tgggtaggta caaaaggtta
     4381 tggattgatg actttggata cacgtgctca actttttcat cataaagaca acgcatcagt
     4441 agcgatgata gtagaaactg atgatggaag actcggcgtt aatgatggca tggccagttt
     4501 ccaaatcatc gacccgtcaa ccggtgattg tattgacact attcccgtca cagaaggaaa
     4561 aatatatttc gaaagtttca acgaattctc acaccctttg ctgcgaggca gtaaacaact
     4621 gctttggttt gcagatgaga aacgtctcgc ctgttataac aaaatcacca aacaacacat
     4681 tttttatccg ttaccggttg cacaaaaaag cggtaattac cagctcgtat ccgacctaaa
     4741 agaagatcct gcaggcaata tttgggtgag tacaacggat gggctactat gttttcttac
     4801 cagcaattat agttggaaga tttacaagaa tgatccgaac aacaaaacgt ctcttagctt
     4861 caatgcgatc ttcagccttt gtttcgatcc cgtaaatcct aaaaaatatt tatggatcgg
     4921 tactaatgga ggcggcatta attgtatgga tatcgcaacg gggaagtgca tacgctattc
     4981 ggtaaaagat ggtttgccca acaacgtgat ttatggaata ttgccggatg atgacggcaa
     5041 tctatggatg agcaccaata aaggccttag ctgtttcaat cctgtaaaac gaacattcaa
     5101 aaattatgaa gagaaggacg gattgcaaag caatgaattc aaccataatg cttattgcag
//
LOCUS       DASQJI010000332         4343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2034405,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000332 DASQJI010000000
VERSION     DASQJI010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4343
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2034405"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..845)
                     /locus_tag="VEV83_09235"
     CDS             complement(138..845)
                     /locus_tag="VEV83_09235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK45339.1"
                     /translation="MNTSIKTALAAIGLLVAFSCKKESTNRQLPIHGYHATDVVAGKY
                     AHVNIGSQVWMTNNLDVTHYRNGDKIPQVKDATKWAALTTGAWCWFNNDSAIGAVYGR
                     LYNWYAVHDPRGLAPLGWHVPSDLEWNTLSTYLGGDSVAGGKMKTTGIYEEGSGRWHK
                     PNLGATNSSGFSALPGSLRYNDGSFSIIGYYGRWWSSTKSSATNSWDRSLNTWVEDLG
                     RSSDNKQFGFSVRCIKD"
     gene            complement(986..2749)
                     /locus_tag="VEV83_09240"
     CDS             complement(986..2749)
                     /locus_tag="VEV83_09240"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45340.1"
                     /translation="MRPNFTLSAVFSIAVISAVQTTFAQTNIFPSTGAAGIGTTTPDA
                     SSLLEVKSTTKGILVPRVTKNQRDAIATPATGLLIYQTNSTPGFYYYSGTAWTAISAK
                     PGWSLTGNAGTISGTNFLGTTDAQPLMFKVSNKKSGLIDFDVAKANTAFGYRSLFSNT
                     TGFSHTAYGYAALYSDSTGYCNTAVGYMALYMNLRSGRNTAIGYQALFSNDGDGNVAN
                     GFNALYSNTSGVQNTADGTYALYNNITGCWNAAGGFNALTSNTSGFYNTAYGTEALAS
                     NTTASSNSAIGFQSLNKNTTGYGNTASGSQSLYSNTTGVGNTANGEAALYYNIYGYDN
                     TATGESALYVNNGIDNTATGSGALLHNTTGGFNTATGFWSLYNNITGTNNTALGYRAD
                     VVSANLSNATAIGASASVDASNKVRIGDNNVTSIGGQVGWTSFSDGRYKKNIKTDVPG
                     LSFINSLKPITYTVDINRLNSYYDKGRKHDSAYEKMKADMQPSADAAAKIVYNGFIAQ
                     EVEAAAKKLDYEFSGVDKPKTEDGLYGLRYADFVVPLVKAVQELSAKNDAKDAKISDL
                     ETRLAKLEAMMNVQQSAVSKN"
     gene            3270..>4343
                     /locus_tag="VEV83_09245"
     CDS             3270..>4343
                     /locus_tag="VEV83_09245"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK45341.1"
                     /translation="MKKIILLFILLQSVLGYSQSDSLLQRLKSSHGAKEEFKIWSNLA
                     DYYEYRGQMDSMRIAGEQMLSIGIQAKQDSLISSAYIVIGSYFAYVGDYNQSLVYLFK
                     ALNLSEECRSSSSICWAAKDIGIVYKSLRNFPEAIKYLRRAQDQLMNYVDPVDRNRTY
                     THLSECFLGLGQKDSALRYVQIANDVIIAGDDYGYARTLFIYASVYESSGDTDLAESY
                     YKKCIAYALAHNVILPLANAAASYSNLLLNSGKYLPAKNYALQSLAASQQSSRKQDII
                     NTAALLRTIYSQLGLKDSAYYYADMKDAYRDTIFNEQKIIQLQNIGFAQQIKEKEDQE
                     KQVAQANERNQNLQYAAIVIALIT"
BASE COUNT         1222 a          930 c          972 g         1219 t
ORIGIN      
        1 gctgccacga actaaagtgt aggcttttat tttttcttgt tatccgcaac gcagcgcacg
       61 cgcggcgaaa aatgtctagc cgatccgagc cgaagcggag ggccttcgca ggcgagccga
      121 gggcgttcta tgcttgttta atctttaatg caccgcacag agaagccaaa ttgcttgttg
      181 tcagaagacc tgcccaaatc ttccacccaa gtgttcaagc tacgatccca ggaattggta
      241 gcactggact ttgtggaact ccaccatcta ccatagtagc cgataataga gaaagatcca
      301 tcgttgtaac gtaggctgcc gggcagcgca ctaaaaccac tgctgttagt ggcgccgagg
      361 ttcggcttgt gccatctacc gctgccttct tcatagattc ctgttgtttt cattttgcca
      421 ccggctactg aatcacctcc taaataagtt gaaagtgtat tccattcgag atcacttggc
      481 acgtgccagc ccagaggtgc caaacctctc ggatcgtgga cagcgtacca gttgtaaagc
      541 ctgccgtaga ctgcccctat agcggaatcg ttattgaacc agcaccatgc gccagtcgtc
      601 aacgccgccc acttcgttgc atccttaacc tgcgggattt tgtcgccgtt cctgtaatga
      661 gttacatcca aattattagt catccacact tggctgccaa tgtttacgtg ggcatattta
      721 cctgcaacaa catccgtcgc atgatagcca tggattggca gttgacgatt ggtgctttct
      781 ttcttacacg aaaaagcgac aagcaatcca atggcggcga gtgcagtttt gatcgatgtg
      841 ttcatggtcg atgaatttag tggtgaaata atttcggttt gctgactgaa gataagatca
      901 tttcggcgca tttgcaagag cgggcgatgc agcgagcaaa ggaagttcct cacgactcca
      961 agcatcattg ggcgatacct gaatattaat ttttactcac ggcggattgc tgcacattca
     1021 tcatcgcctc caattttgca agcctggttt caagatcact gatctttgcg tcttttgcat
     1081 cattctttgc agacagttcc tgcacagcct ttacaagtgg cactacaaaa tctgcataac
     1141 gcaaaccata cagaccgtct tcggtttttg gtttgtctac gccgctgaat tcataatcga
     1201 gtttctttgc tgcggcttct acttcttgtg ctataaaacc gttgtacaca atctttgccg
     1261 ctgcatctgc tgatggctgc atatcagctt tcatcttttc ataagcgctg tcatgctttc
     1321 tccctttatc gtaatatgaa ttcaatcggt ttatatcaac tgtataggtt attggtttca
     1381 gactgttaat aaaggagagc cccggcacat ctgttttaat atttttctta tacctcccat
     1441 cgctgaaact tgtccagccg acttgtccgc cgatgcttgt tacgttgtta tcaccgatcc
     1501 ttaccttatt gctcgcatca acacttgcac tcgctccaat cgctgttgca tttgaaagat
     1561 tggcggaaac aacatctgcc ctataaccca gggcagtatt gttagtaccg gtaatattgt
     1621 tgtagaggga ccaaaagccg gtggcagtat taaaaccgcc ggtagtattg tgaagaagcg
     1681 cacccgaacc agtggcggta ttgtcaattc cgttgttgac atagagtgct gactcacctg
     1741 ttgcagtgtt gtcataacca taaatgttat agtacagagc tgcttccccg ttagcagtgt
     1801 tcccaacccc tgtggtattt gaatagagcg attgggaacc gctggctgta ttgccataac
     1861 cagtagtatt tttgttaagg gattgaaatc caattgcaga gttactagaa gctgttgtat
     1921 tagacgctaa tgcttccgtg ccgtaggcag tattgtaaaa acctgaagtg ttcgaagtaa
     1981 gagcattgaa accaccagca gcattccaac accccgtaat attgttgtac aaagcgtatg
     2041 taccatcggc ggtattttgt acacccgaag tgttggaata tagcgcatta aagccattag
     2101 caacattgcc gtcgccatcg ttagaaaaga gagcttgata accaatagcc gtattgcgac
     2161 cacttctaag attcatataa agagccatat aaccaacagc tgtattacaa taacctgttg
     2221 agtcggaata aagggccgca tagccataag ctgtatgtga aaatcccgtg gtatttgaaa
     2281 aaagacttcg gtacccaaaa gctgtattcg cttttgcaac atcaaaatca atgaggcccg
     2341 acttcttgtt acttacttta aacatgagag gctgcgcgtc tgtggttccc agaaaattcg
     2401 tacctgaaat ggtgcctgcg ttaccggtaa gcgaccatcc aggttttgca ctgattgcgg
     2461 tccaggcggt tccactgtaa taataaaagc ccggtgtact atttgtctga taaataagca
     2521 aacccgttgc aggcgttgca atggcatcac gctggttttt tgttacgcgg ggtaccagta
     2581 tgcctttggt agttgatttt acttccagta aggaagatgc atctggagtg gtcgtaccaa
     2641 tgccggcggc gccagttgac ggaaagatat ttgtttgagc aaatgtggtt tgcaccgctg
     2701 aaataacggc aatactaaac actgccgaaa gggtaaagtt tggtctcatt gagttttgtt
     2761 ttagtatgaa tggcattctt gaaagcgaag tcatgccggt atcaaaacta tgctatatcc
     2821 ggcagtttgg taacggtgaa ataacaagcg ggatacagct tatattgaag cattcggcca
     2881 acatctgcgg aagctcagga aagcgcaagc catgaccatg atgagcctgg cttccgtgag
     2941 ataagttata ttaataggag agagtctgcc gctgcctaca agtcctggct gcgcggttgc
     3001 agcaattcca tgagcatgta ttggcgacac tggtaatgcc ggaaggcgac aaagacgtat
     3061 gtcattacga gtgcaaaaag aactcgggca ggttgccttt tggtaaattt atgtgttgtg
     3121 cgtcatgcga gtgcgacacc gtacattttg tttatatcca atttattgtg acagtttcac
     3181 tactttacag aaactaagta cactattata agtaagcata ctgcgaaaaa caactgagaa
     3241 tttggggaga atcaaaacta acatatttca tgaaaaaaat aattctactc tttattctgt
     3301 tacaaagcgt attggggtat tcacaaagcg acagcttgct gcaaaggttg aagagtagtc
     3361 acggtgcgaa agaagaattt aaaatatggt cgaatctggc tgattattat gagtacaggg
     3421 gtcagatgga tagtatgagg atagcgggag aacaaatgct ttccatcggc attcaggcaa
     3481 aacaggattc attaataagt tctgcataca ttgtcattgg gtcctacttt gcctatgttg
     3541 gagactacaa ccaatcactc gtttatttat tcaaagcact caatctgtcg gaagaatgca
     3601 gatcaagcag ctcaatatgc tgggctgcta aagacattgg aattgtttat aaaagtttaa
     3661 gaaattttcc tgaagcgata aaatatttac gacgggcaca ggatcagtta atgaattatg
     3721 ttgaccccgt tgatagaaac cgtacgtaca cccatttgtc agaatgtttt ttggggctcg
     3781 ggcaaaaaga ttctgcattg cggtatgtgc aaatagcaaa tgatgtaata atagcaggcg
     3841 atgattatgg ctatgcacga actcttttta tttatgcgag tgtttatgaa agcagtggtg
     3901 ataccgatct tgctgaaagc tattataaaa aatgcattgc ctatgcactt gcacataacg
     3961 ttattttacc gcttgcgaat gccgccgcca gctatagtaa tttgttactt aacagtggta
     4021 aatatttgcc cgcaaaaaac tatgcattac aaagcctggc ggcatcgcag caaagcagca
     4081 ggaaacaaga catcattaat acagccgctt tattacgtac aatatatagt cagctgggat
     4141 taaaggacag cgcttattat tatgctgaca tgaaagatgc atacagggat accattttta
     4201 atgaacagaa aattatacag ttgcaaaaca tcggtttcgc acagcaaata aaagaaaaag
     4261 aagaccagga aaaacaggtt gcacaggcga atgaaagaaa ccagaatctt caatatgctg
     4321 caatagtaat tgcccttatc aca
//
LOCUS       DASQJI010000333         2359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_344735,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000333 DASQJI010000000
VERSION     DASQJI010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344735"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VEV83_09250"
     CDS             complement(<1..202)
                     /locus_tag="VEV83_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45342.1"
                     /translation="MASISLDPQMAVKTGFTLKDHLWKAGCYCIDELNILLTHDKKCS
                     ILLKKDHFDGAVYSIDDFFQRVK"
     gene            539..2344
                     /locus_tag="VEV83_09255"
     CDS             539..2344
                     /locus_tag="VEV83_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HYK45343.1"
                     /translation="MDLIQYWWVLLVILALVMYKFILRVFFGMVIVPDDKIGLVIKNF
                     VLIGKNRELKDNRIIATNGEAGMQAQTLAPGLYWAYWIWQYKIRMEAFIIIPEAQLGL
                     IKAKDGDPLNAGRILALPVECDKFQDAVKFLANKGQKGPQAAFLTPGSYRINTFLFEL
                     QLAPVTVIEKEEVGIVTTLDGEPLDQDQIAGRSVPDHKNYQDPVKFLSGGGQKGRQED
                     VILAGAYYLNPWFAVVEQVPMLHIPIGNVGVVNSFVGVPGKDISGVEFAHGNIVEKGR
                     RGVWNVPLDPGKYAINTYTHTVEIVPTTNLVLNWATGRSESHQLDKNLSTITVRSSDG
                     FTFNLDVSQIIHIPSTEAPKVIARFGNMINLVSQVLEPTIGNYFRNSAQTSDVIDFLK
                     NRTARQNDAKEHIKRTLDEYNVKAVDTLIGDITPPNELMKTLTDRKIAEQETLTLQTQ
                     KLAEDTRKQFESAKALATIQPEVVKSNQQVEIKKNLANAKIEEARGDGESKTINAKAD
                     AEVTKVTGDADGGKILAIGNAEAEVTKRKTEAMGTKEYAQVQIAHYLAENKIKIVPDV
                     LVSDGQGEGGMVSALIGSELFKSLKNKNAGEPEKK"
BASE COUNT          748 a          483 c          567 g          561 t
ORIGIN      
        1 gctttacccg ttgaaagaaa tcgtcaatcg aatacactgc accgtcaaaa tgatctttct
       61 tcagcaggat tgaacatttt ttatcgtggg ttagaagaat gttgagctca tcaatacaat
      121 aacatcctgc cttccacaaa tgatctttga gcgtaaagcc agtttttact gccatttgcg
      181 ggtcaagaga tatggatgcc atcaactaaa taatttctta cctgcgctcg gcttaaatgg
      241 taaatattgg aaggcgcata ttttttcaga caaacggata aaagcttatg ctgcattcgc
      301 gcagcagaac agcactggta atcacaccgg tgaaaacagc cgatgaacct aacattcaag
      361 tagatcaatt tattcaccgt ggttttgcat gcatttctta cgagctagtt cacgcaagga
      421 aaaatgccgc gcggaatatt tatcgaagaa aatcgaagtc atctcatatt acgcattatc
      481 ttcaaaggca aattttcaac tgcattaaac cacattacca aaactaaaac ttaaaaagat
      541 ggacttgatt cagtattggt gggtactact ggtgatcctc gcgctcgtga tgtacaaatt
      601 tatccttcgt gtgttttttg ggatggtgat agtgccggat gacaagatcg ggctggtgat
      661 caaaaatttt gttctgattg gcaagaaccg tgagctaaaa gataaccgca tcatagccac
      721 caacggcgag gcaggtatgc aggcgcaaac acttgccccg ggattgtatt gggcgtattg
      781 gatctggcaa tacaagataa gaatggaggc ctttatcatc atccccgagg cgcagcttgg
      841 gttaataaaa gcaaaggacg gcgacccatt gaacgcagga cgcattcttg cgttacctgt
      901 agaatgcgat aaattccagg atgctgttaa attcctggcg aacaaggggc aaaaaggtcc
      961 gcaagctgca tttcttacgc cgggcagtta tcgcatcaat acatttcttt tcgaacttca
     1021 gcttgcgccc gtcactgtga tcgagaagga ggaggttgga attgtgacca cactcgatgg
     1081 agagccgctg gatcaagacc aaatagccgg acgatcagtt cccgatcata agaattacca
     1141 ggacccggta aaatttcttt caggcggagg ccagaaagga aggcaggaag atgttatcct
     1201 cgcgggggct tattatctga atccgtggtt cgctgttgtt gaacaagttc ctatgttaca
     1261 tataccgatc ggtaacgtgg gcgtagtaaa ctcattcgtg ggtgtaccag gtaaagacat
     1321 tagcggagtt gaatttgcac acggcaatat tgtggaaaaa ggacggcgtg gtgtttggaa
     1381 cgttccgctc gatccgggca aatacgcgat caatacttat acgcacacag tagaaattgt
     1441 acccacaacg aatttggtcc tcaactgggc gaccgggaga agtgaatcgc atcagctcga
     1501 taaaaatcta agcactatta cagtacgttc ttccgatgga tttactttta atttagatgt
     1561 gtcacaaatc attcatatac ccagtacaga agcgcctaag gtaattgccc gctttgggaa
     1621 tatgatcaat cttgtttcac aggtattgga gccaactatc ggtaactact tcaggaattc
     1681 tgctcaaaca agtgatgtga ttgacttcct caagaaccgt actgcgcggc aaaacgacgc
     1741 taaggaacat atcaagcgaa cgcttgatga atataacgta aaagcggttg atacgctgat
     1801 aggcgacata actcctccca atgaattgat gaaaacactc actgacagga aaatcgctga
     1861 acaggaaact cttacgcttc aaacgcaaaa attggcagaa gataccagga aacaatttga
     1921 aagcgcaaaa gcgctggcaa ccatacagcc cgaagtggta aagtcgaatc agcaggttga
     1981 gatcaaaaag aacctggcaa atgcaaagat tgaagaggca agaggagacg gagaatcaaa
     2041 aacgatcaat gctaaggcgg acgccgaggt aacaaaagtc acgggtgacg cagatggggg
     2101 gaagatatta gcgataggaa acgcagaggc cgaagtgaca aaaagaaaga ccgaggccat
     2161 gggtacaaag gaatatgcac aggtgcagat tgcgcactat ttggcagaaa acaaaattaa
     2221 aattgttccg gacgtcctcg tctctgacgg ccaaggagaa ggagggatgg tgagtgcctt
     2281 gatcggcagc gaacttttca agagtttaaa aaataaaaat gccggcgagc ctgaaaagaa
     2341 ataactggat gtgaataca
//
LOCUS       DASQJI010000334         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1111639,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000334 DASQJI010000000
VERSION     DASQJI010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111639"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VEV83_09260"
     CDS             <1..1107
                     /locus_tag="VEV83_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYK45344.1"
                     /translation="CLNVPYPVNYGGVYDLFYKLPALQRQGVNIHLHCFLKDRREQPE
                     LNKYCEHVYYYKRNTGRKAISSKLPYIVASRNSETLLQRLLEDDHPILMEGVHSTYLT
                     TDKRFDNRKKFVRLHNVEAEYYQQLFKHSRNLKKKLYYRREAKLLAAYERKLSHNAAA
                     FWTVTEKDAAHYKMHYDCPNVEYLPLFIPEWEVTSQEGMGTHCLYHGNLEVEENEKAA
                     CWLLKNVFQKLDVPLVIAGNNPSKKIIDLVKANPQASLAVNPSEKQMQDVIAKAHINV
                     LPSFNSTGIKIKLVNALFNGRHCVVNKEMIEGTRLAEMCHVLKSATEFKERISFLYHE
                     PLTTAEKELRKTILPQEFCNEENAKQIIKTIWNE"
     gene            complement(1135..1821)
                     /locus_tag="VEV83_09265"
     CDS             complement(1135..1821)
                     /locus_tag="VEV83_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK45345.1"
                     /translation="MYEPVVTVTDANIYQGDSLILSDVNFTVHRGEFVYLVGKTGTGK
                     SSLLKTLYGELRLREGRATVAGYDLTTMTWKKVPFLRRNLGVVFQDFQLLTDRNVNEN
                     LRFVLKATGWKEEKLIQEKIADVLEKVGLKSKGFKMTYELSGGEQQRVDIARALLNSP
                     KLVLADEPTGNLDPETSDEIMQLLFNISKDYGTAVIMATHDFIVISKYPSRMLKTERG
                     QVFDSAKAEV"
     gene            1961..>2280
                     /locus_tag="VEV83_09270"
     CDS             1961..>2280
                     /locus_tag="VEV83_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYK45346.1"
                     /translation="MKTLTKAEEQVMQALWKIGQGFLKDIVEKMADPKPHPNTVATLL
                     KILVDKKFVGTEIFGRMNRYSPLVTKQEYSKSTMNTLIKGYFGGSYSKAVSFLVDEKK
                     LSVQ"
BASE COUNT          702 a          488 c          489 g          601 t
ORIGIN      
        1 tgtctgaatg ttccttaccc agtcaactac ggcggcgttt acgatctgtt ttacaagcta
       61 cctgcattac aacgtcaagg agttaacatc catcttcatt gtttcctaaa agatcggcgc
      121 gaacaacctg aactaaacaa atattgcgaa catgtttact attacaaaag gaatacgggt
      181 cgcaaagcta tctcatcgaa attgccttac atcgtggcaa gcaggaacag cgagacactt
      241 ttgcaacgat tgttagagga tgatcatcct attttaatgg aaggagttca tagcacttat
      301 ttaacaacag ataaaagatt tgataaccga aaaaaatttg tccggctgca taatgtagaa
      361 gcggaatatt atcagcaact gtttaagcac agccgtaacc tgaaaaaaaa gttgtattac
      421 cggcgcgaag cgaagctgct tgcggcatac gaaagaaagt tatcacacaa tgctgcggct
      481 ttttggacgg tgactgaaaa agatgcagcg cattacaaaa tgcactatga ctgtccgaac
      541 gttgaatatc tgccattatt tattcccgaa tgggaagtaa catcacagga agggatgggc
      601 acgcattgcc tgtaccatgg aaatctcgaa gtagaagaga acgaaaaagc ggcgtgctgg
      661 cttttaaaaa atgtttttca gaagcttgac gtgcctcttg tgatagcagg aaacaatcct
      721 tcaaaaaaaa tcattgatct cgtcaaggcg aatccgcaag cttcgctcgc cgtaaatcca
      781 tccgaaaaac aaatgcagga tgtaattgca aaggcgcaca ttaatgtgtt gccatctttt
      841 aattcgacgg gtattaaaat aaaattggtg aacgcattat ttaatggccg gcactgcgtg
      901 gtaaataaag aaatgataga aggaacgagg cttgctgaaa tgtgtcatgt gcttaaaagc
      961 gcaactgaat tcaaagagcg catatcgttt ttataccacg agccgcttac gacagcagaa
     1021 aaagagctga ggaaaactat tttgccgcag gaattttgta acgaagaaaa tgcgaagcaa
     1081 attattaaaa ctatctggaa cgaataagtc agttctgcac ccgtaagctg gtgcttacac
     1141 ttccgctttt gcgctgtcaa acacctgccc gcgttctgtt ttcagcatcc gcgatggata
     1201 tttactgatg acaataaaat cgtgcgtggc catgattaca gcagtcccat aatccttcga
     1261 gatattaaat agcaactgca ttatttcatc gcttgtctca gggtcgaggt tacccgtcgg
     1321 ctcatccgca aggacgagtt taggggaatt caacagtgcc ctcgcaatat caacgcgttg
     1381 ctgctcgcca ccactcagct cgtatgtcat tttgaagcct ttgcttttca aaccaacttt
     1441 ctccagcacg tcagcgattt tttcctgtat gagcttttct tctttccatc ccgtcgcttt
     1501 cagtacgaag cgcaggtttt cgttcacatt cctgtcggtc agcagctgaa agtcctggaa
     1561 gactaccccc aggttccgcc tgagaaaagg aacttttttc cacgtcatag ttgtcaggtc
     1621 atacccggca acggtggccc ggccttcgcg cagtcttaac tcgccgtaca atgtcttcag
     1681 caggctgctt ttaccggtgc cggttttgcc aaccaggtac acgaattcgc cgcggtgaac
     1741 tgtgaaattc acatcgctga ggatcaggct atccccctgg tagatattgg catcagtgac
     1801 agttacaaca ggctcataca ttgctctggt tttttcaaaa gtaaagagaa tgaagataac
     1861 tgctattctc acatgcaaaa gaactgttat aaaaataaaa ctaagaaaat agttgcacaa
     1921 ctaaatcatt agttatacgt ttgactaaag ttttagttgt atgaaaacat tgacaaaagc
     1981 cgaagaacag gtcatgcagg cactttggaa gattggacaa ggctttttaa aagacatagt
     2041 ggaaaaaatg gctgatccta agccacaccc gaatacggtc gctacgcttt tgaaaatttt
     2101 ggttgacaaa aaattcgtcg gcacagaaat tttcggacgc atgaaccgct attcgccgct
     2161 ggtgacaaaa caggaatatt caaaaagtac aatgaatacc ctgatcaaag ggtacttcgg
     2221 aggttcttac agtaaagcag tttcattttt ggtggacgaa aaaaaattaa gtgtccagga
//
LOCUS       DASQJI010000335         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_651592,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000335 DASQJI010000000
VERSION     DASQJI010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651592"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VEV83_09275"
     CDS             <1..183
                     /locus_tag="VEV83_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HYK45347.1"
                     /translation="AYSFPRLEELANDGLIEWNEFGLQATKTGRHFIRNICNAFDLHY
                     LRKDAVVNEMKYSKAI"
     gene            complement(628..1089)
                     /gene="tnpA"
                     /locus_tag="VEV83_09280"
     CDS             complement(628..1089)
                     /gene="tnpA"
                     /locus_tag="VEV83_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYK45348.1"
                     /translation="MANTYTQIHIQCVMAVKFRNSVIVPTWKERLHQYITGIVQNCGH
                     KMLSINSVPDHLHMLFGLRPTQSLSDLMRVVKGESSEWVNDQKFLPFLFRWQEGFAGF
                     SYARSQISVVANYIERQEEHHKRMTFLEEYKNMLDKFEIEYDSRYIFKPLE"
     gene            complement(1358..>2107)
                     /locus_tag="VEV83_09285"
     CDS             complement(1358..>2107)
                     /locus_tag="VEV83_09285"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HYK45349.1"
                     /translation="RHADLRVVISVFADAYLAHSIMKGTSCFIEETVQYIYKKQLEEA
                     DVIVINKSDLLPKGELEYVKQTIEASYEGKKIICVDAFDENDIRNWLQLLNEFQVASP
                     RTSLELDYDVYGAGEAMLAWFDQNVSIHTVKPNAVESAIFLAESIFHKIRLAEYTIGH
                     IKFLMSDGAWQKKLSFTTTGKAENSDLNERHLCKHVDVLINARVQTSPQLLQQTIHSA
                     IEETITFKGCRIVAGRPSAFRPGYPKPVHRV"
BASE COUNT          568 a          477 c          451 g          611 t
ORIGIN      
        1 gcatatagtt ttccgaggct cgaagagctt gcgaacgatg ggcttatcga atggaatgaa
       61 ttcggtttgc aagcgacaaa aacggggaga cactttataa gaaatatctg caacgctttt
      121 gatctgcatt acctgcgtaa ggatgcggtt gtgaatgaaa tgaaatacag taaagcgatt
      181 taggacgttg ccaatcgttg cctatgttcc ttttaaaaac gtaatgcccc aacggggcat
      241 caatggaatt cgttgaatta ttttttttct gccgacgttt ttgctcctac ggagcagaag
      301 ccgacacgct atatgtggca gcaacaatcc ggcgcactca taattgacct gccttcggcc
      361 tctaagttgg cagcgccgaa tttatgtcct cgttcctgct tcatggggca gcacttcatc
      421 aggagacaaa caacacttcg gccctgtgcg actttggcaa tggcatggca tcctttgctg
      481 cgtagaagct gcgtaaatat taattcttcg gaagacgcat ttccgcatga ttcattagcg
      541 ctctgatcag ccccggtagg ggccacacgt cggtagtagc aacaaatatg taatgatcat
      601 ttttgccccg taggggcaat acctggatca ttcaagcggt ttaaaaatgt atcgcgaatc
      661 atattcaatt tcgaatttgt ccagcatgtt cttgtattct tcgaggaaag tcattctctt
      721 atgatgttct tcctgccttt cgatataatt tgcgaccact gaaatttgcg aacgagcata
      781 cgaaaatccg gcgaagcctt cctgccacct aaaaagaaag ggcagaaatt tttgatcatt
      841 cacccattcg gacgattctc cttttacgac cctcatcaaa tcagaaagcg actgggtcgg
      901 tcttaatccg aaaagcatat gtaaatgatc tggcacgctg tttattgata acatcttgtg
      961 accacaattt tgaacgatgc cggtaatgta ctggtgtagt ctttctttcc atgtcggcac
     1021 aataacagaa tttctgaatt tgacggccat gacacattga atgtggattt gggtataggt
     1081 atttgccata aaaaagggtt tgaattaagg ggatgaaatt gccgctaaag gtattgcccc
     1141 tacggggcat aaacgaaaaa aacgatggac attttttttc taccgacgtt tcgctcctac
     1201 ggagcatcat ccgagtgctt aaccccgtgc gtatggatgg taccagtggc acgaaatgta
     1261 cgacggttat tcttgcctcg taggggcaac acccgagaat ctttaagatc ctaaaaacac
     1321 gtgcagctcg ttacgcaaat tctctgatat cttacaccta taccctgtgc acaggcttcg
     1381 ggtaacccgg ccgaaaggct gatggccggc cagctacaat acgacaaccc ttgaatgtta
     1441 ttgtttcttc tatagccgaa tgaatggttt gttgcaacaa ctgcggactg gtttgcaccc
     1501 gcgcattgat cagcacatcc acgtgcttgc aaagatgacg ttcgttgaga tcagaattct
     1561 ccgcttttcc tgtcgtagta aaacttaatt ttttctgcca tgctccgtca ctcatcaaaa
     1621 atttaatatg gccgatcgta tattccgcaa gccgtatttt atgaaagatg ctttctgcca
     1681 aaaatatagc tgactctacg gcatttggtt ttaccgtatg tattgaaacg ttttgatcaa
     1741 accaggcaag catggcctca ccggcgccat aaacatcgta atcaagttca agagaagttc
     1801 tcggcgatgc gacctggaat tcgtttaata actgcagcca attacgaatg tcattttcat
     1861 cgaaagcatc tacacaaatt attttcttgc cctcgtagct tgcttcaatc gtctgtttca
     1921 catattctaa ttcgcccttt gggagcaagt ctgatttatt gataacaata acatccgctt
     1981 cctctagttg ctttttataa atatattgaa cggtttcctc gatgaaacaa gatgtgcctt
     2041 tcatgattga atgcgccaaa tatgcatcgg cgaaaacgct gataactacc cgcaggtcgg
     2101 catggcg
//
LOCUS       DASQJI010000336         9909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1726883,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000336 DASQJI010000000
VERSION     DASQJI010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9909
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726883"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2196)
                     /gene="rpoB"
                     /locus_tag="VEV83_09290"
     CDS             complement(<1..2196)
                     /gene="rpoB"
                     /locus_tag="VEV83_09290"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HYK45350.1"
                     /translation="MSSTKVQNRISFGKTKNLAESPDLLDIQLKSFQDFFQLETTPDK
                     RNNEGLFKVFKENFPITDTRNIFVLEFLDYFIDPPRYTIEECMERGLTYAVPLKAKLR
                     LSCNDEEHVDFQTIVQDVFLGNIPYMTPRGTFVINGAERVVVSQLHRSPGVFFGQSIH
                     PNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTTLLRSIGYETDKDILE
                     LFGMADEVKADKKTLHAYVGKKLAARVLRTWVEDFVDEDTGEVVSIERNEIVMERDTV
                     LDEEAIEMIAEMDVKSVFIQKEDVGGDYAIIYNTLNKDTSNSELEAVQHIYRQLRGAD
                     APDNETARGIIDKLFFSDKRYDLGEVGRYKINRKLSVTTDLNTKVLTREDIIEIIKYL
                     VKLTNGKNEIDDIDHLSNRRVRTVGEQLYAQFGVGLARMARTIRERMNVRDNEVFTPV
                     DLINARTLSSVINSFFGTSQLSQFLDQTNPLSEITHKRRISALGPGGLSRERAGFEVR
                     DVHYSHYGRLCTIETPEGPNIGLISTLCVHAQINEMGFIETPYRKVKDGKVEMKKLTF
                     LSAEEEDTAKIAQSSAELDETGHFVEDRITSRQTGDFPILEKNEVEFMDVAPNQIVGL
                     SASLIPFLEHDDANRALMGSNMQRQAVPLIRPEAPIVGTGLESKAARDARIQIHAEGD
                     GVVEYVDAKEIHVRYNRNDVDRLVSFEDDLQVYKLTKFIKTNQSTSIILR"
     gene            2538..3251
                     /locus_tag="VEV83_09295"
     CDS             2538..3251
                     /locus_tag="VEV83_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45351.1"
                     /translation="MKKQTTVFAILFLLISGIAEAQYYGGVYMEKGYRRPPPHYQKQP
                     YHKKQQYQNQKKRAPSFKPTVNLSLGYGYPNLDKDYFPDQFYGAVNAYKGTEFTQTGP
                     VTGALDFQFSRYNSIGVMGTYGKAGVGYFDLGANGPTPLFNGNIESWSVMLNMMTYFP
                     SYQTVSPYIRTAIGMVNRTEDYTYADGSKALLGGENIRDLAYQVSIGTRFNMSPNAGF
                     YIEAGYGRYIVNGGLTFRF"
     gene            complement(3334..3795)
                     /locus_tag="VEV83_09300"
     CDS             complement(3334..3795)
                     /locus_tag="VEV83_09300"
                     /inference="COORDINATES: protein motif:HMM:NF036614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5362 family protein"
                     /protein_id="HYK45352.1"
                     /translation="MEEMNTTNVLTLQVDQTNIPYLTEAAKWGKFLSIVGFVFCGLIA
                     IAAFFAGSILSTYFGALGADTTSDVGSLTGAVLTVYYLIVAVLYFFPSLYLFNFASRM
                     QAALRNNDQATLNSSFRNLKACLKFWGILLIIVLSFLAIALIVAVLGASLA"
     gene            complement(3870..5348)
                     /gene="proS"
                     /locus_tag="VEV83_09305"
     CDS             complement(3870..5348)
                     /gene="proS"
                     /locus_tag="VEV83_09305"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HYK45353.1"
                     /translation="MGKAITSRSEDYSQWYNDLVLKSELADYSAVRGCMIIRPYGFTL
                     WEHMRDALDKMFKDTGHVNAYFPLFVPKSLFEAEEANAEGFAKECAVVTHYRLKADPA
                     NKGKLIVDPEAKLEEELVIRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMRT
                     RLFLRTAEFLWQEGHTAHATKDEAVFETRQILDIYARFAEEFMGVPVIKGIKTESERF
                     AGAVDTYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFSDKTNKLEYVWATSWGVST
                     RLIGALVMAHSDDDGLLLPPKLAPWQVVIIPIYKNDEQKKSIAEKVNEITAALKEVNI
                     RVKYDDNDANRPGWKFAEYEMKGVPVRITIGPKDLENGVAELARRDTKEKINVALSDL
                     QPYIIKLLDEIQTNIFNRAKRFRDEHITAANTWDEFLDILENKTGFVSAHWDGTAETE
                     EKIKELAKATIRCIPLDAEKEQGICILTGKPSDKRVLFARAY"
     gene            5429..6073
                     /locus_tag="VEV83_09310"
     CDS             5429..6073
                     /locus_tag="VEV83_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45354.1"
                     /translation="MKKNIIYLLCVTILLTSCSSAYKTSQTPDDVYYSPAKKIYPSSQ
                     YQTYGSSDDAYLRMKVQDHNRWAGLDDYEYWNDSRYYYNNYYNPWNTYFSWSTWYNPY
                     SSYWYNPWASWYSPYCTVVYYKNPTVYYGGYSGYHLSTYNNRTYNTTNLPLQNGNNSN
                     LYNNTNTNRHSLFNTNQNQTNSNPVRTFNSGSTHSSSGGGRISGGGVRTRPPGN"
     gene            6122..7657
                     /locus_tag="VEV83_09315"
     CDS             6122..7657
                     /locus_tag="VEV83_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45355.1"
                     /translation="MRKFLLAVIISCCFHFAFCQTPEDALRSSWFIPNGTARSMSIGG
                     AVGALGGDISSVYTNPAGIGMYKTSEAVVSPGMLFNSNQSDYRGTSLNGIKRSGFQLG
                     TSGVVIGGKPETPNNSSAFSIAVTQVASYNNHIQYEGFNNYSSYSEQYLEELVRDNAD
                     LNAAANNYPFGSSLAFFTYLVDSLADPDGNLIGYRSLVPVPTGTKQQYDETDKGGLYE
                     ISFAYGANFSDKLYIGGGLNIPLSFYTQDINYTETDATEVINNNFSYSRFTQHHSIDG
                     AGFNAKIGAIYRPTPSVRLGFAFHTPSFLYLSDDLSAEMTTDTEDYAGSKTAKSSDFP
                     NAVSHAHYTQLTPYRLIGSLVYILNQVEDVKKQKGFVSADIEFANHRGSRYWATYQGE
                     DIPQSVDDYYRAIDDVIKSYYQGAVNFRLGGELKFSPIAIRLGGAYYSSPYADHSLKA
                     SRAMLGGGLGYRDRGMFVDLTFVETFNTDVSFPYRLADKANTFAELKNQRANVLLTFG
                     IKF"
     gene            complement(8062..8529)
                     /locus_tag="VEV83_09320"
     CDS             complement(8062..8529)
                     /locus_tag="VEV83_09320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HYK45356.1"
                     /translation="MKRFIGIFLFILVSALLSNVNTKAGTAKWPPLFVGSAVAKINSI
                     QGSTSKNIITGFATYYAKQFEGNQTATGEVFHHSKFTAASNSFALNTWVKVTNILTGR
                     SIIVRINDRMHPRMSQKGRVLDLTYTAAKQLQIVTRGVAKVKVEPISPDVAQN"
     gene            8991..9734
                     /locus_tag="VEV83_09325"
     CDS             8991..9734
                     /locus_tag="VEV83_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HYK45357.1"
                     /translation="MKILVCISKTPDTTSKIAFKDNDSKFEETGVQWIINPYDEWYAL
                     VRAIELKEKDASVQLHLITVGLSDCDPIIRKALALGGEEAIRVNATSDDSYYIAAQIA
                     EVAKQNNYDLVLTGKETIDYNASSVGGMLAELLDMPYVSLATQLEINGGIATITREIE
                     GGEEVDEVQLPVVVSCQKGVAEQRIPNMRGIMAARTKPLKVIEPANIDTLTKVVTFEL
                     PPAKAGVKLVAADNVPELVRLLHEEAKVI"
BASE COUNT         2679 a         2263 c         2143 g         2824 t
ORIGIN      
        1 acgtaaaatg atcgaggtcg attggttcgt tttgatgaac ttggttagct tgtaaacctg
       61 gagatcatct tcaaagctca ccagcctgtc aacatcgtta cgattgtagc gaacgtgaat
      121 ttcttttgca tccacgtatt ctacgacgcc gtcgccttct gcatgaattt gaattcttgc
      181 atcgcgcgcg gctttgcttt ctaaaccggt accaacaatc ggtgcttccg gacgaatgag
      241 cgggaccgcc tgccgttgca tgttcgatcc catcaacgca cggttggcat cgtcatgttc
      301 cagaaaaggg atcaatgatg cgctcaaacc aacgatctgg tttggcgcga cgtccataaa
      361 ttctacttca ttcttttcga gtatcgggaa gtcaccggtt tgcctgctgg taatgcgatc
      421 ttcgacgaaa tgaccggttt catcaagttc agcgctgctc tgagcgatct ttgcagtatc
      481 ttcttcttcg gcacttaaga acgtaagctt tttcatttct accttaccgt cttttacttt
      541 acggtaaggc gtttctatga agcccatttc attgatctgg gcatgtacgc aaagtgtaga
      601 tatcaaacca atgttaggtc cttccggcgt ctcgatcgta cacaatcttc catagtgaga
      661 atagtgtacg tcgcgtactt caaatcccgc acgctcacgg cttaaaccac cgggaccgag
      721 ggccgagata cggcgtttgt gcgttatctc tgacagagga ttggtttgat caaggaattg
      781 agataactgg gacgttccga aaaatgaatt gataacagaa gaaagtgttc ttgcattgat
      841 cagatcaacc ggtgtgaaca cttcattgtc gcgcacattc atcctttccc ggatcgtgcg
      901 tgccatacgg gcgaggccaa caccaaattg tgcatagagt tgctcaccaa ctgtacgaac
      961 gcggcggtta cttaagtgat cgatgtcatc gatttcgttt ttaccattcg taagttttac
     1021 gagatatttt atgatctcga tgatgtcttc tctcgttaaa acttttgtat tcaggtccgt
     1081 agttacactg agtttacggt tgatcttata ccgacctact tcgccaagat cataacgttt
     1141 atcgctgaaa aataatttgt caatgatacc acgtgctgtt tcgttgtcag gcgcgtctgc
     1201 accgcgtaac tggcggtaaa tatgttgaac ggcttcaagc tcgctgttgg aagtatcctt
     1261 gttcagcgta ttataaatga tggcataatc gccgccaaca tcttctttct gaataaacac
     1321 actctttaca tccatttcgg cgatcatttc aatcgcctct tcgtccaaca cagtgtcacg
     1381 ctccatcacg atctcattac gctcgatcga cactacttcg cctgtatctt catcgacgaa
     1441 atcttctacc cacgttctga gtacacgggc tgccaacttt ttgcccacat aagcgtgcaa
     1501 agttttcttg tcagccttca cttcgtcggc catgccaaac agctcaagaa tgtctttatc
     1561 cgtttcataa ccgatcgaac gaagcagtgt agttacagga aatttcttct tacggtcgat
     1621 gtaggcatac atcacgttgt tgatgtctgt ggcaaattcc atccacgcgc ctttaaaagg
     1681 aatcactctc gcagaataaa tcttagtccc gttcggatgg atggactggc cgaaaaatac
     1741 gcccggcgac cggtgaagct gggaaacaac aacgcgttcc gcaccgttaa ttacaaaggt
     1801 gcccctcggc gtcatgtaag gaatatttcc caaaaacacg tcttgcacga tcgtttgaaa
     1861 atccacatgc tcttcgtcgt tacagctcaa acgcagtttg gctttaagcg gaacagcata
     1921 agtaaggccc cgctccatac attcttcaat tgtataacgc ggcggatcaa tgaagtaatc
     1981 gaggaattcg agtacgaaaa tgttccgcgt atcggtgata gggaaatttt ctttgaacac
     2041 cttaaacaag ccttcgttgt ttcgcttatc cggtgtggtt tcaagctgaa agaaatcctg
     2101 gaaagatttt aactgaatat ccaataggtc tggtgactca gccaggtttt ttgtttttcc
     2161 aaagctgatc cggttttgca cttttgttga tgacatatct gatttgatag ttttttggac
     2221 aaagattttt gggtagaact tacaggttct ggaggcatag attaattaag cgtgccatta
     2281 aatggccaat tgctgcccgt tccgttgcca acttgcccaa aattaaaaag gatggcaaag
     2341 gtaataattc taatgacaat aagaattttt ttgtctttgc ttgcccgtaa aaaaccagtg
     2401 aatgggaatc tcgtcgctga catactcgga attttaacaa cgacttgtac ccaagtttac
     2461 aaaaggaacg agaaagtttt tacaccgcgt cgttaaactt taaaaaccac atggcgtcga
     2521 aggctaaaat gaagagtatg aaaaagcaaa ctacggtttt tgcgatccta tttctcctta
     2581 ttagcggaat agcagaagcg cagtattatg gcggcgtcta tatggaaaaa ggctaccgaa
     2641 gaccccctcc ccattaccag aagcagcctt accacaaaaa acaacaatac caaaatcaga
     2701 agaaaagagc acccagcttc aagccgaccg ttaacctgag ccttggttat ggctacccta
     2761 atctcgacaa agattacttc cctgatcaat tttatggcgc agtaaacgct tataaaggaa
     2821 ctgagtttac tcaaaccgga cctgttaccg gcgccctgga ttttcaattt agccgctaca
     2881 atagtatagg cgtgatgggt acttatggaa aagccggtgt tggatatttc gatttgggtg
     2941 caaacggccc tacacctctt tttaacggga acatcgaaag ctggagcgtg atgctgaata
     3001 tgatgacgta tttcccaagc taccaaacgg tgagccctta cattcgaaca gccataggta
     3061 tggttaacag aacagaagat tacacttatg ccgacggaag taaagcattg ctcggcggtg
     3121 aaaacatccg tgatctcgct taccaggtat ccatcggaac gcggtttaat atgtccccta
     3181 acgcgggatt ctatattgaa gcaggctacg gaagatatat tgtaaacgga ggcctgacgt
     3241 ttagatttta atcaactata tttctttcaa actatattcc tttcataaaa attgtcctct
     3301 ttttaaatga ggacattttt tatggtatgc ttgtcaggcc aggcttgcgc cgagaactgc
     3361 cacaattagt gcaatggcca ggaacgagag tacgataatg agaaggatgc cccaaaactt
     3421 aagacaggcc ttcaaatttc taaaagaact attcaaggtc gcctggtcat tgtttctcag
     3481 cgctgcctgc atcctcgacg cgaaattgaa cagatataac gaaggaaaaa agtacaggac
     3541 tgccacaatg agataataga ccgtgagaac agctcctgtc agcgaaccta cgtcagaggt
     3601 tgtgtcagcg cccaaagcgc caaagtatgt agaaagtata ctgccagcaa agaaagcggc
     3661 aatggctatt aatccgcaaa agacaaaccc tactattgac aggaattttc cccacttcgc
     3721 cgcctccgtc aagtagggaa tgtttgtctg atctacctgg agcgtcaata catttgtggt
     3781 gttcatttct tccataagca ttttttagga tgatacaatt tacaatttta agcaagagcg
     3841 ccaaaataat tccaccacgg cgtgagttcc taataagctc ttgcaaacaa tactcttttg
     3901 tcagaaggtt taccagttag tatgcaaatg ccttgttctt tctccgcatc taacggtatg
     3961 cagcgtatgg ttgcttttgc cagttccttt atcttttctt ccgtttctgc agtgccgtcc
     4021 caatgagcac ttacaaatcc agtcttattt tcaagtatgt ccaaaaattc gtcccacgtg
     4081 tttgcagcag ttatatgttc gtctctgaat cgctttgccc ggttgaaaat gtttgtttga
     4141 atttcgtcga gcagcttaat aatatacggt tgcagatcac tcaatgccac atttattttt
     4201 tcttttgtgt ctctccgcgc cagttctgcc actccgtttt caaggtcctt ggggccgatc
     4261 gttattcgta ctggaacgcc tttcatctcg tactcagcaa atttccatcc tggccggttg
     4321 gcgtcattat cgtcatactt aacccgtatg ttgacttctt ttagcgcggc tgttatttca
     4381 ttcactttct cagcgatgct cttcttctgc tcatcatttt tgtagatagg tattatcaca
     4441 acctgccatg gggcaagttt cggtggtagc aacaatccgt cgtcgtcgct gtgcgccatt
     4501 accaatgcac cgatcaaacg agtgcttacg ccccaacttg ttgcccacac gtactccagt
     4561 ttgttagtct tgtcgctaaa ttttacatca aacgctttcg caaaattttg cccgagaaaa
     4621 tgtgaagttc ctgcctggag cgcctttcca tcctgcatga gcgcttcgat gcaatacgtg
     4681 tccaccgctc ccgcgaaacg ttcgctttca gtctttattc cttttattac aggcactccc
     4741 ataaattctt cggcgaaacg cgcatagata tcgagtatct gtctcgtttc aaacacagct
     4801 tcgtctttcg ttgcgtgggc cgtgtgccct tcctgccata aaaattctgc ggttcttaag
     4861 aacaatcttg tacgcatttc ccacctaact acgttggccc actgattgat caggatcggc
     4921 aggtcgcggt aactttgaat ccagttctta taagtattcc aaatgatcgc ttcactcgtc
     4981 ggacgaatca ctaactcttc ttcaagcttt gcctcaggat caacgatcaa tttgcctttg
     5041 ttggcaggat cagccttcaa cctataatgc gtaacaacgg cgcattcttt cgcaaagcct
     5101 tcagcgtttg cctcttccgc ctcaaacaaa cttttaggca caaacaaagg aaagtaagcg
     5161 ttcacgtgcc cggtgtcctt gaacattttg tcgagcgcat cgcgcatatg ttcccacaac
     5221 gtaaacccgt atggcctgat gatcatgcag cctcgaacag cgctataatc tgccaactca
     5281 ctttttaaaa caaggtcgtt gtaccattga gaataatcct cgctgcgcga agtaattgct
     5341 ttgcccatgc cggttataaa aaagtgtgcg aaataaaggt atgaaacgcc gcaaaagtaa
     5401 taacttagct tataaacata agtgcgtcat gaaaaagaat ataatttatt tgttgtgtgt
     5461 gacgatcctg ttaactagct gctcatctgc atacaaaact tcccaaacac ctgatgatgt
     5521 gtattactca cctgcgaaga aaatttatcc gtcatcccaa tatcaaacct acgggtcttc
     5581 tgatgatgct tatttgcgta tgaaggtgca ggaccataac cgctgggccg gtcttgatga
     5641 ctatgaatac tggaatgaca gcaggtacta ttacaataat tattacaacc catggaatac
     5701 ttatttctcg tggagtacct ggtataatcc ttattcttcg tattggtata atccgtgggc
     5761 ttcatggtat tcgccttatt gcactgttgt ttattacaaa aatccgactg tttactacgg
     5821 aggatacagc ggctatcact tatcaacgta caataaccgc acttacaata ccacgaattt
     5881 gcctttgcag aatggcaata atagcaatct atacaacaat accaatacga atcgccacag
     5941 cctttttaac acaaatcaaa atcaaacaaa ttcgaaccct gtccgaacct tcaatagcgg
     6001 cagcacgcac tcaagctccg gaggcggaag gattagtggc ggtggagtcc gtacacgtcc
     6061 gccaggtaat tagcaatatt taaacggatc acgaaacact taagaaagga cgcagacact
     6121 tatgaggaaa ttcttgttgg cggtaataat ctcctgttgc tttcattttg ctttttgtca
     6181 aactcccgaa gatgccttgc ggagttcgtg gttcattccc aatggcacgg cgcgaagtat
     6241 gtccatcgga ggcgctgtgg gggcattggg cggggatatt tcttcagtct ataccaatcc
     6301 cgctggcatt ggtatgtata aaacaagcga ggcagtagta agtccgggaa tgttatttaa
     6361 ctcgaatcag tctgattatc gtggcacctc cctcaatggt attaagaggt ctggttttca
     6421 attgggaaca tcaggtgtgg tgatcggcgg taaaccggaa acacctaata actcaagcgc
     6481 attttcaatt gccgttacgc aagttgccag ctataataat cacatccaat acgagggatt
     6541 taataattac agctcttatt ccgagcaata tcttgaagaa ctggttcgcg ataatgctga
     6601 ccttaacgct gccgcgaaca attatccgtt cggctcctct ctcgcttttt tcacatatct
     6661 tgtcgatagc ctggctgacc ctgatggtaa cttgataggt tatcgaagcc ttgtgccggt
     6721 tccaacaggc actaagcagc agtatgacga aacagacaaa ggcggcctct atgagatctc
     6781 atttgcatat ggcgctaatt tttcagataa actttacatc ggcggcggtt tgaatattcc
     6841 cctctcattt tatacgcagg acatcaacta tactgaaacc gacgcaaccg aagtcatcaa
     6901 taataatttt agctactcgc gtttcaccca gcatcacagt atagacgggg ccggatttaa
     6961 tgcgaagatt ggagcgatat atcgtccgac accatcagtg cgtttaggct ttgcctttca
     7021 taccccgtca tttctttatt tgtcagatga tttgagcgca gaaatgacca ccgataccga
     7081 ggattatgcc ggatcgaaaa ccgcgaaaag ctccgacttt cctaatgcag tttcgcacgc
     7141 tcactatacg cagttaactc cataccgcct tattggaagt cttgtgtata ttttaaacca
     7201 ggtggaggat gttaaaaagc agaaaggctt tgtgtccgcc gatattgaat ttgcaaatca
     7261 tcgagggtca aggtactggg cgacgtacca gggcgaagat atcccgcaaa gcgttgatga
     7321 ttattaccgc gccatagatg acgttattaa atcctactac cagggtgcgg ttaattttcg
     7381 cttaggaggg gaattgaaat tctctcccat tgcaatacgc cttggcggtg cctattacag
     7441 cagcccttat gcagaccatt ctcttaaagc gagccgcgcc atgctgggcg gcggacttgg
     7501 atatcgggac cgcggaatgt ttgtagacct gacttttgtt gagactttta atactgacgt
     7561 aagttttcca tatcggttgg ccgataaagc aaacacattt gcagaactga aaaatcagcg
     7621 ggcaaatgtt ttacttactt ttgggataaa attctaaatc cctaaaaata ctcgcgctcg
     7681 ctttttttac ttacctcgct gatggtgtaa acgatcccga agcgaatttg atcagttata
     7741 cgaggttgac gccgtttctt accagggaac tctaaacctt cggctgggtg gtgagttaaa
     7801 gttgtcgcca ctcgggatac gcatcggcgg cgcttattat agcagtccat atgctgatca
     7861 caagttaaga caaaccggct ccttgctgcg gcgggccttt ggctatcggg ggcatgggtt
     7921 gtttatagat ttcatgttcg gcgacacatt caacaagggc atccgttttc cccatcggtt
     7981 aggcaataaa gcaaacacat ttgcagaact gaaaaatcag cgtgcaaatg tgttacttac
     8041 tgttggaata aaattataag ctcaattttg tgctacgtca ggagagatcg gctcgacctt
     8101 cacctttgcc acgcctctgg ttacgatctg caactgcttg gcggcagtat atgtaagatc
     8161 gagtacccgg cctttttgcg acatccttgg atgcatgcgg tcgttgatac gaacgatgat
     8221 tgaacggccg gttaaaatat tagtcacctt cacccaggta ttaagagcaa aagagttgct
     8281 cgcagcagta aacttgctat gatggaaaac ttcgccggtt gccgtttggt taccttcaaa
     8341 ctgcttcgcg taataagtgg cgaaacctgt tataatattt ttcgatgtac ttccctggat
     8401 gctattaatt tttgctactg ctgaaccaac aaatagcggt ggccatttgg cggtgccggc
     8461 ttttgtattg acgtttgaaa ggagggctga aaccagaatg aaaagaaaga ttccgataaa
     8521 tcgcttcatg ataatgattt gagaagctca cgacttcagt tatgaaaaaa tatccccggc
     8581 ctgttgcttc ctaaaatttt tgtctaccag ttttatacaa atctctcctc acttgccaag
     8641 aaccgtgcca gaaaaagaga aatccgacct aatttgccga caaaccacct acaatgatca
     8701 cgaccttgct tctgctaatt ttcgttttgc aagtaacctc ggactgggca gtaactcagt
     8761 gatttatcct agacaggatt atagcgagcg acgaaggtaa aggatttgtg cgaaaatgag
     8821 cgatttcggc atgttaataa ccaaaaagct ggttttcatt atgttagagt ataaattcgg
     8881 ttcgcttcaa agaggttcag gttgttcgta gctcgcagcg cgaaagaaat aggaatcgtt
     8941 aattgtagaa caactttatc ggctattttt gcggccatta aattcttagt atgaagattt
     9001 tggtatgcat tagcaaaaca cctgatacca cttcaaagat tgcctttaaa gataatgact
     9061 cgaagtttga agaaacaggc gtgcaatgga taatcaatcc gtacgacgaa tggtatgccc
     9121 tggttcgagc gatcgaattg aaggaaaaag atgcttccgt acaattgcat ttgataactg
     9181 tagggctctc agattgtgat cccattattc ggaaagcgct tgcgctcggc ggcgaggaag
     9241 ctattcgcgt gaacgcgacg agcgatgata gttactacat tgctgcccaa attgctgaag
     9301 ttgcaaaaca aaataattat gaccttgtct taacggggaa agaaaccatt gattacaacg
     9361 cttcgtcggt tggaggaatg ctggccgaac ttctcgacat gccatatgtt tcccttgcaa
     9421 cgcaattgga gatcaacggt ggaatagcta cgattactcg cgaaattgag ggtggagaag
     9481 aagtagatga agttcagttg cctgttgtgg ttagttgcca gaaaggagtg gctgaacaac
     9541 gcattccgaa tatgcgggga attatggctg cccgcaccaa accgctgaaa gtgatcgagc
     9601 ctgcaaacat agacacgttg acgaaagttg tgactttcga attgcccccc gctaaggcgg
     9661 gcgtaaaatt ggtagctgcc gataatgtgc ccgaactcgt tcgcctgctg cacgaagaag
     9721 ctaaggtgat ataatgcatt attgcggctg catctgcctt tttattaaat gtttaataca
     9781 aagcaatggt actcgttttt atagatcact ccgacgaaca gataagaaaa tcttcttttg
     9841 aagttttgag ctacggcgct gctctcgctg aaaagttggg cacatcagcg gcgggtttat
     9901 tgctaggca
//
LOCUS       DASQJI010000337        29917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_806455,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000337 DASQJI010000000
VERSION     DASQJI010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 29917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29917
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806455"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..485)
                     /locus_tag="VEV83_09330"
     CDS             complement(183..485)
                     /locus_tag="VEV83_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYK45358.1"
                     /translation="MQTITVDELKSRLDAGENIHLLDVREPSENADFNIGGTLLPLGE
                     IRNMNTDAIDEWKDEEIVAYCRSGNRSGIAAQFLEQIGFKNVKNLVGGMIAWRQKY"
     gene            complement(496..1326)
                     /locus_tag="VEV83_09335"
     CDS             complement(496..1326)
                     /locus_tag="VEV83_09335"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HYK45359.1"
                     /translation="MFRFITKRSFAVNFLVAIALLLLIAFLFFMSLDSLTRHNETIRV
                     PQVSGRTLADATSLLKKDGFEVAVQDSVYIDTLEPLAVVKQSPESEELVKVHRTIYLT
                     VNRAQPPLIEMPDLRGFSFRSAQLYLESLGLKVGDTSYTPDIARNAVKDQLFNGRTIE
                     PGTKIPMSSAIDFVLGNGLGETQLAVPDLVGLTVSQAREYLSGDNVGVGVIITTGAVT
                     DTANAYIVKQNPPPTTQLPSGETVHNRIRPGQLMDIWISTTPPVRDTTAVQPAARDSQ
                     "
     gene            complement(1357..2340)
                     /locus_tag="VEV83_09340"
     CDS             complement(1357..2340)
                     /locus_tag="VEV83_09340"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HYK45360.1"
                     /translation="MKKKIALVTGGYSREAEISYQSVITVNNNIDRDKFDVFVIDITP
                     EGWHYKTDAGDQIAVDKNDFSINIDDQKISFDGVLMCIHGTPGEDGKLQGYFDCINLP
                     YSTCDASTSALTFNKRYTVAVAAFAGIHVSKSVHIFRNEVTEPSKILADLRLPVFVKP
                     NNGGSSIGMSKVAQESEIGGALQKALKEDDQVLIEEFVAGRELTIGVFKTKGEIITLP
                     VTEIKSKKDFFDFEAKYKGMSEEITPAQVDETIAEKVRQAARKIYAVLNCRGVVRIDF
                     IYNETVAQPFMLEVNTVPGQSAASIIPQQVKAMGWTLQNFYTALIEECWNN"
     gene            complement(2540..2887)
                     /locus_tag="VEV83_09345"
     CDS             complement(2540..2887)
                     /locus_tag="VEV83_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HYK45361.1"
                     /translation="MAIKITEECINCGACEPECPNNAIYEGGVEWAISDGTTVRGPFT
                     LLDGTVVDAEQRMAPIAVDIYYITPNKCTECQGFHEEPQCAAVCPVDCCVPDEMYRET
                     VEELAAKKEKMHI"
     gene            2947..3954
                     /locus_tag="VEV83_09350"
     CDS             2947..3954
                     /locus_tag="VEV83_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0008218 - bioluminescence [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA reductase"
                     /protein_id="HYK45362.1"
                     /translation="MNIEERIGLTVRLGDYLSMDDETLRAAKENARLANPWFTAEFVD
                     IALQNISNNFLKRESLNKWLEGYDLQTELAKPKTIGIVMAGNIPLVGFHDLLCVFISG
                     HKALIKPSAKDEVLIKHIAEKLFEWDDQTKNYIAFADNLKNCDAYIATGSNNSSRYFE
                     YYFGKYPHIIRSNRTSVAVLDGNETEAELSLLANDIQQYFGLGCRNVTKLFVPKGYDF
                     EPLLRALRKYAHFIDFHKYKNNYDYQLALLMLNGKYYMTNDSIILTENESPFSAVSVL
                     NYEYYMDIDAVKEKISGDNNLQLITGHGFVPFGQAQSPSLSDYADGVDTMQFLVSLSS
                     D"
     gene            4093..4599
                     /locus_tag="VEV83_09355"
     CDS             4093..4599
                     /locus_tag="VEV83_09355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45363.1"
                     /translation="MMKKVLLIAFGIFRLAHSNAQEVDTIPPYQKDSSHIPEFTVLKL
                     DSTYTNDRSVPKDEPLIIIYFSPTCGHCQITAEEFSKRMHDMRKYFFVWVSYSPLPEI
                     KDFARAYGFQHYNNVLIGRDPNYYLPSYFRVKFTPFIAVYDKDHHLLQTFERGTEADT
                     IIDLLKEQ"
     gene            complement(5121..8000)
                     /gene="uvrA"
                     /locus_tag="VEV83_09360"
     CDS             complement(5121..8000)
                     /gene="uvrA"
                     /locus_tag="VEV83_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HYK45364.1"
                     /translation="MASIKSVVNIDGNDDGKITTHNIFIKGARVHNLKNISVSFPRNK
                     FIVVTGVSGSGKSSLTMDTLFAEGQRRYAESLSAYVRQFMARMVKPDVDFIKGLCPAI
                     AIEQKVITRTPRSTVGSMTEIYDYLRLLYGRTGRTISPVSGREVKKDDVQDVVGAIQR
                     TKPGSKIYILVPFKQHANRQAREELNILLQKGFSRMYLRDEASEVISIDDLLEMEDRD
                     LKQKLIAHQSSRNTYVLVDRIVVKEFDEDDIHRLSDSINIAFYEGDGTMFLDVNETKL
                     LPFSNKFELDGIVFEEPVPNLFSFNNPYGACPTCEGFSQVLGIDPDLVIPDRRMSVYD
                     EGVAPWKGEKLGWWREQFVRGARSINFPVHKPICDLTDEQYKILWTGKGSVHGIDDFF
                     KEVEQNLYKVQYRVLLSRYRGRTKCPDCEGYRLRKEALYVKVGDKHIGELCEMQVNDL
                     KRWFDNLQLSNYQQSVASRILIEIHQRMQTLLDVGLGYLTLNRLANSLSGGESQRIQL
                     TRSLGSNLTNSLYILDEPSIGLHARDTERLIAVLKRLRDAGNTVVVVEHDEMMMHHAD
                     HIIDMGPLASHLGGEVVAEGDFQEITENKESLTGKYLRRELTIPVPSKLRKSKHSLQL
                     TGARQNNLKNIDVDFPLNVLCVVSGVSGSGKTTLVKQILYPALSRLKGEFGEKAGFHK
                     KLEGDLEFVSQVELVDQNPIGRSSRSNPVTYIKAYDEIRELFSQQPLSKMRGFQPKHF
                     SFNVDGGRCDACKGEGEQVVEMQFLADVHLTCEVCGGKKFKEEVLEVTYRQKNIYEIL
                     DLSVDDAIEFFHDEKSLAKALMPLQDVGLGYIKLGQSSDTLSGGEAQRVKLASFLGKA
                     RPSDQSVARGKPGGHILFIFDEPTTGLHFHDIQKLLAAFNALITQGHSVIVIEHNMDV
                     IKSADWVIDLGPEAGDKGGYVVYSGPPAGLKNAKDSVTGKFMPAD"
     gene            8250..8834
                     /locus_tag="VEV83_09365"
     CDS             8250..8834
                     /locus_tag="VEV83_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK45365.1"
                     /translation="MNTCNTLTDTQLILNFQEGNCSALETLVSRYKDKLFSSILFLVK
                     DKFLAEDLFQETFLRIIDTLRSRRYNEEGKFLPWAMRIAHNLCVDHFRKVKRTPAILT
                     QDKKDIFDVIHVVVNDHAEHRIIRDQSYDRVHQMLAKLPDEQREVIVLRHFGDMSFKE
                     IAETTNCSINTALGRMRYGLINLRKMMLEKQINL"
     gene            complement(9103..11085)
                     /locus_tag="VEV83_09370"
     CDS             complement(9103..11085)
                     /locus_tag="VEV83_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HYK45366.1"
                     /translation="MSKQINRITAAGILIALGIIYGDIGTSPLYVLNAIVNGRLVNEK
                     LILGSLSCIIWTLTLQTSVKYVILTLRADNKGEGGIFSLYALVRRQKKWLVLPAMIGG
                     AALLADGIITPPISVTAAVEGLKQIHFFSDITTKTIVLIVLAILSALFFLQQFGTISI
                     GRLFGPIMFLWFAMLAVLGIFHISDDIYIFKALSPHYAVELLTAYPKGFWILGAVFLC
                     TTGAEALYSDLGHCGRGNIRASWIFVKTCLILNYLGQGAWLLANYRGVQIAGPMADSF
                     NSFFGMMPHWFRPIGIVIATAAAIIASQALISGSFTLIGEALRLNLWPKMKINFPTEE
                     KGQLFIPGINALLFIGCVGIVLYFERSINMEAAYGLAITMCMISTSILFANYMISRRV
                     LPFWIYLYLAVYITIEGSFLTANLQKFPHGGYVTFIAGGALFFVMYVWYRSRKIKNRY
                     VEFVKLDHYIPMIQELSNDRSVPKYSTHLVYLTSANNPKEIEHKIIYSILNKKPKRAD
                     IYWFVHVDILDDPYTSEYAVDHIIPNDIIRVEFRLGFRVQQRINLMFRKVVEELVANN
                     EVNITSRYESLERNNIVGDFQFIVMEKFLSSDNELPFFERIIVKLHLWLKDVSLSEER
                     GFGLDPSFVTVEKFPLIVSTAPTISLRRVFSEKEEG"
     gene            complement(11177..13165)
                     /locus_tag="VEV83_09375"
     CDS             complement(11177..13165)
                     /locus_tag="VEV83_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HYK45367.1"
                     /translation="MNKSINRVTAAGLVVALGIIYGDIGTSPLYVFNSIIHGRLVNEA
                     LIIGSLSCIIWTITLQTTIKYVVLILRADNKGEGGTFALYALVRRRRRWLVIPAMIGG
                     ASLLADGIITPPISITSAIEGLKNIPAVNDISANTIMYIVLGILAIFFFFQQFGTGSI
                     GRLFGPIMFIWFTMIAVLGCVHLLDDLSIFRAFNPVYAINFLVNYKGAFVLLGAVFLC
                     TTGAEALYSDLGHCGRGNIRVSWIYVKSCLLLNYIGQGAYLLAHRSGITVSDQVKEQL
                     HLNSFYDLMPDWFVIIGVVVATSAAIIASQAMVAGSFTLIGEALRLNLWPKTKVKYPS
                     EARGQLFIPSTNLLMFLGCIGVVLYFKESSRMEAAYGLAIIITMIATTILFANYLVLH
                     RLKAFWIYIFITFYLTVELTFLAALAHKFLEGGFITVLLATLMFFVMFIWYRARKIKN
                     RYVEFVRLEHYVPLIQELSNDRSVPKYTTHLVYMTSANNPKEIEHKIIYSILNKKPKR
                     ADIYWFVHVDTIDEPYTCNYVVDHIIPNDIIRVEFRLGFRVQQRINLMFRKVVEELVK
                     NNEVNITSRYESLERNNVVGDFQFIVMEKYLSQDNELPFFERVIMKLHFWLKEASLNE
                     EKGFGLDPSFVTVEKFPLMVSALPRIPLQRIFTEPFEE"
     gene            13327..14850
                     /locus_tag="VEV83_09380"
     CDS             13327..14850
                     /locus_tag="VEV83_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45368.1"
                     /translation="MIQKVLLTFLALTLLHLFSPAQRIFYSEPEKDDVRSIDFDIIGK
                     LNNQYLVYKQVRNSHAISVYDNSMKLLERVNMDFLPDKLINSDIIAYKDFFYFVYQYQ
                     KKNVIRCMAARIDANGKIMGDPIVLDTTAISFFASNKVYNVLYSEDKQRIAVYKLNNK
                     GDQQYVFSCSLFDDSLAHLSSYTAFIPMEQHNDFLTEFSLANDGTIVFVKASGNSQNS
                     NLENLALMVKEPEAERIFSYPLDIGNIFLDNIRVKVDNKRNHFVVSAFYSKQKRGNID
                     GLYCAVWDETDTSLIAAKQVPFNDELKSNAKSEGSSRSAFNDYFLQNIFVRKDGGFAI
                     AAESAYTSSRGVYNSRWDYMYNSPYWYNSNSYLYGSPYSYYYPWTSPYGYGSQSTRYY
                     ADNIAVIAFDSTATMEWASIIPKSQYDDNSDNFIGYGIYIGAGQVNFLFNQFERRTLL
                     LQAESIDPNGKAVLAPTLKELDRGYQFMPRYAKQVSSHEVLLPCQYRSYLCFAKIDF"
     gene            14860..15834
                     /locus_tag="VEV83_09385"
     CDS             14860..15834
                     /locus_tag="VEV83_09385"
                     /inference="COORDINATES: protein motif:HMM:NF040411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6427 family protein"
                     /protein_id="HYK45369.1"
                     /translation="MVAFFRDKSGVAVFWLIILCFGLHVYSLINPPHLIVNPNEGFFY
                     YLVSPFTNLQPYTLAMMYVILIFLTALQLNFVINDLKMLRKESYTVAAAFLLLSSLLP
                     AFNQISTALLACNLLIWIMHGSCRLYNATNPRPTIYNLGLLTGIAFILYYPLLPVVII
                     VLIALVLMRTFRLNEWFVLIFGILTPLYFLVAILFLKDNLRVLPLPEQLLNLTVPPLK
                     ELPILITTLAVATAIVLFGVFSVQQDKRDVMQVRRSWTVVFVFLIFSIPGVLFIQHAW
                     PTALLLVMVPASCYTGFTFSDSSRHIFATISFWALLALTIYNNWFANY"
     gene            15956..16615
                     /gene="purQ"
                     /locus_tag="VEV83_09390"
     CDS             15956..16615
                     /gene="purQ"
                     /locus_tag="VEV83_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HYK45370.1"
                     /translation="MKFGIVVFPGSNCDRDMQDALQNDLNKEVIMLWHKDRDLSAFTN
                     DDCIVLPGGFSFGDYLRCGAIARLSPMMESVIEFANKGGKVLGVCNGFQILCESGLLP
                     GVLLANGNQQFVCKNVFLKDNNSEIYKIPIAHGDGRYFAEEPVLDDLEKNQQVLFYYC
                     DENGNVDKSFNPNHAIRNIAGIRNKAGNVFGMMPHPERASSVALGNTDGRKIFSVLGL
                     N"
     gene            16622..17074
                     /locus_tag="VEV83_09395"
     CDS             16622..17074
                     /locus_tag="VEV83_09395"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HYK45371.1"
                     /translation="MKKIFILLFAIISATILHAQVLDPVKWNYSAEKNSDKEYTVTIA
                     ATLSPAWHIYSMHTPADGPVPTSISFNKNPLVLLSGAVKENGKLKTEHDDLFGVDVKY
                     FADKVEFVQSVKLKSAVKTNVSGNIKYMVCNDKTCLPPKTIPFNIQLQ"
     gene            17092..19044
                     /locus_tag="VEV83_09400"
     CDS             17092..19044
                     /locus_tag="VEV83_09400"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK45372.1"
                     /translation="MKKKLFFIVALAASCQILFAQNDPVHFSFSAERKNDSVVYLVVR
                     ANAERDFLLFSPKAQSKDDAFVSQLYLDSASSKYLADTNIIESKNFQIVKDESTSTSF
                     KAFADSAVFQYPLKLRSTDSATIKGSFSWLGKKADQFPNGEKTFELTILPVNSSLADA
                     IVTNEAPKGWLNFFWIGLAAGLFAVFLPCLYPLFPVTVTYFMHHHGNRRQSIQSAFLY
                     SLSIVLIYGIPTTLLTLAFGETILYKIAVHPVTNLFFFSIFIAFALSFFGLFEITLPS
                     SWSTHTDKLAGKGGYAGIFFMALTLVIVSFSCTGIVAGQLLSYLSSEGVAAGPIAGMF
                     GFGTGLALPFTVLALFPTLMHSMPKSGGWLNTVKVSFAFIELAMALKFLSNVDLIYHW
                     RVLDREIFIALWIVLAVLLGFYLLGKIKFYHDTDVKHVGMMRLFFSIASFAFAFYLLP
                     GMWGAPLKALSGWIPPDYTQDFNLYDPNTKNIVSSAQKEETGVLPPKKMADKIAAPYG
                     LTAYYDLDEGIAAAKLLHKPIMLDFTGYSCANCRKMEAQVWADPAVLKRIAENFVLVS
                     LYVDEPSDLPANEKYDNEKGERISTVGEKNLDYEINKFGFNAQPLYMFIDANQNPLSN
                     IKYGYDPDINKFVRHLDEVKKVFEHE"
     gene            19368..19586
                     /locus_tag="VEV83_09405"
     CDS             19368..19586
                     /locus_tag="VEV83_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45373.1"
                     /translation="MHQASVKDNEEKWLLEVLPTIHELIFYLTRLNDSIMVYVKKIYK
                     DPDEGSNVYEMSNGLSYTHDGQGRWRIV"
     gene            19693..21006
                     /locus_tag="VEV83_09410"
     CDS             19693..21006
                     /locus_tag="VEV83_09410"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK45374.1"
                     /translation="MKYVAGCLLLLLAKPLSAQLKAEDVHAFTLSNGMKFLVMEDNSI
                     PNANMYLFFKVGSRNEYTGITGLSHFFEHMMFNGAKKYGPKMLDKVEEFNGGANNAYT
                     TENVTVYTDWFPSSKLELFFDIESDRIANLAFDSAMIESEREVVHSEWRTDLENSPWE
                     PLSQAVLGVAFNQHPYHWPVIGYESDIKNWTKDDLEKYFKTYYAPNNCVVVITGNVSL
                     DEVKKLAQRYMEPIPAQPPARPVHIIEPPQTGERRVVVQKDVTTPYLMVSYHVPATKD
                     SDYYALDVLNSILSEGNSSRLYSSLVDQKQLATDVFTYLPLCFDPFEFNVYVACNEGV
                     KEADVEKATFDEIDKIKKDGITPTELQKVKNQKLMDFYSDVETINGKSQNIGNYEVFF
                     GDYRKMFNAPAAYNNVTVDDVKRVANQYFKKSNRTVGILKSNVEN"
     gene            21010..22431
                     /locus_tag="VEV83_09415"
     CDS             21010..22431
                     /locus_tag="VEV83_09415"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK45375.1"
                     /translation="MQKNSQVVLVLMFLLTATLTKAQTNPRYKLPGYQKFQLQNGLTV
                     YLMEKHDVPIMSIDMVVPAGAIYDGEKAGLASLTAACLKCGTKSYTKKQIEEAFDFAG
                     ASYRISGLKEVADVSVELAVKDQAKLLPVIKELLVDPTFPEDEVDKEKKRELVNLNQS
                     KESPEDVIDLYWDKFFFGNAAYGNIVSGTVSSLTPLTSASLKSFYASRYSPAGSAIAV
                     VGDFKADEMKATITNLFSGWKGSANASSQNPSLSFDPPATKRVLLVNKEDAKETTLLI
                     GGIGVTRNNPDYLPIQVVNTFFGGRFTSWLNDELRIKSGLTYGARSTFTTFKTSGVFQ
                     ISTHTANETTEPTIDKTLEILNRLHDKKLDEETLTSAKNYMIGLFPPRFQTTEELAHL
                     LTNMFWYGYDESYINNFETNVNAVTMEKANAIIEKYFLKDSLQFVLIGKASEIKKIAA
                     KYGSVTEVQIKDDIGKGFEHPRL"
     gene            22506..23267
                     /locus_tag="VEV83_09420"
     CDS             22506..23267
                     /locus_tag="VEV83_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45376.1"
                     /translation="MKKFCTAVLLVLLSFGCMNVSEDIDVSANGAGTYSEEIDLSSLL
                     SFVGAAASMDSSAENSTSIPDMDSTISLKSFADTSTSLTADEKQLLQNAHVRITTNQA
                     DNIFKMQLVFPFKNMQDLQKLLALNSGTSSMNMMMKSAGLDKSMPTDTADSQMPDLSS
                     IYTTTCNSGMIDKKINQEKWKAMQENEQFMQLQQSGEMMKSYTYTTTIHLPSPAKKLV
                     GEKAALSSDKKTVIIQGTIADMTSHPQLFAYHVDY"
     gene            complement(23284..23610)
                     /locus_tag="VEV83_09425"
     CDS             complement(23284..23610)
                     /locus_tag="VEV83_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK45377.1"
                     /translation="MTTLPLESIPEKEIFPGYFGRLIHTDNMTLAFWRIEAGASVPEH
                     SHVNEQVVNGIEGTFEMTVAGEVVVVRPGEILVIPSNVKHAGKAITDVKILDVFYPVR
                     EDYKNR"
     gene            complement(23625..24095)
                     /locus_tag="VEV83_09430"
     CDS             complement(23625..24095)
                     /locus_tag="VEV83_09430"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK45378.1"
                     /translation="MEKTITELRNIVAEFSKKFHDLSDEELSAERGAGKWTRKEVIGH
                     LVDSAQNNLRRFICGQYEKKPPKIIYMQNFWVSANNYGAMSKEDIITLWKLMNERICA
                     VLQNMNVENYNMNCDTGTEVPELHTLQWLAHDYNRHLKHHLNQIIPDSFDIMYP"
     gene            complement(24116..25222)
                     /locus_tag="VEV83_09435"
     CDS             complement(24116..25222)
                     /locus_tag="VEV83_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45379.1"
                     /translation="MKPSSTCRAVLAFVCAISFYSLYAQAADEPSSSKGNVSASKLFK
                     DEQLLHLRLSANFRAVQKDRDDDPGYHPARLSYKNSDSVDVSIPVKIKARGNFRKDRS
                     NCIFPPLWLNFPKHHDDSTGLFMNQEKLKLVTHCQGDQYVIREWLVYKLYNLVSDKSF
                     RARLVKVDYIDSSAKLKVDSHYGILLEDEDEMAARNGAILLKRKMVPPQATDHEEYLK
                     MTLFEYLIGNTDWSIPYLHNIKLISPDSTHVPYTVAYDFDHAGIINAPYAVPAEQLGI
                     PSVRVRIYRGYCLPYTDFDETIKFYNELKEKIYQVYTGCSLLPPKYIKETTGYLDDFY
                     KTINNEKTRLKEFGLPCTVEGKQNILIKGLKGSD"
     gene            25896..26072
                     /locus_tag="VEV83_09440"
     CDS             25896..26072
                     /locus_tag="VEV83_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 family protein"
                     /protein_id="HYK45380.1"
                     /translation="MLRWTVIFLIVAIIAAIFGFGGIAAGAAGIAKFLFFLFIVLFIL
                     SLIFGRRGTVTDDI"
     gene            26157..26411
                     /locus_tag="VEV83_09445"
     CDS             26157..26411
                     /locus_tag="VEV83_09445"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HYK45381.1"
                     /translation="MARIKVDLHNIYNNGSAIDQALQTAFEEAISKKIREIEIIPGKG
                     SGQLRKKVERFLQLPHIKQSYHRIENDSKNFGRLFVYFKF"
     gene            26491..28557
                     /locus_tag="VEV83_09450"
     CDS             26491..28557
                     /locus_tag="VEV83_09450"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK45382.1"
                     /translation="MKYCLCLFFIACLVELDAQQKFEPPATAAIPVTDTLHGVLLTDD
                     YRWLEDKSDEKVIEWTKAQHDYGIQYLQSTQKTHAGLREDIANYIDLDYEGPLDKEGK
                     RVFQTIKRKGDKQSKLYTIVDGKKKLIWDPLQLDTSGNTATTGLVYTYDGERAAISVQ
                     KSGGEITTTYLIDTKTGKILYPPIQNTFNFQWAKDQQHAYITLRSQDDVNKQLPLKTY
                     WLTVGEPADKAMFIGTTTDAENSYFVYDNRYSDVSFYGESNFWSNKAYIRNTGVFDTG
                     KLIYESRKSNAYPDAIGDKLYIFTNDNAPNYRLMVADKNNPEYKNWRVLIPEGETVLQ
                     NYIVTKNNIIIQDKQDIQSRLTLYDLSGKKIKQIELPETGNVSSINYDREEDSVYLTL
                     NTFTSTPKIFVASASDFKWRLYYQRILPVDMSNIVGEIKFFKSKDSTKVPVFVVHRKD
                     MKLDGNNPVLLTAYGGFDAGIEPQFYGFYAALINRGCVIVEAGIRGGDEYGEKWHEEG
                     MLANKQNCFDDFNSCAEWLVKEKYTTPNRLVAMGASNGGLLMGAIATQRPDLYKAIVC
                     EVPLIDMLRYHKFLIARYWIPEYGSSENEEQFRWLLRYSPYHNIRRGVNVPTMLVTAG
                     ANDSRVDPMNAKKFVAALQNNPGQISPVILHMDYNSGHGSGQSTSQTIDNWNFIFEFI
                     MNQLGM"
     gene            28566..>29917
                     /locus_tag="VEV83_09455"
     CDS             28566..>29917
                     /locus_tag="VEV83_09455"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK45383.1"
                     /translation="MDLSLKRIFPWFLLTGIVVNGTGLLTPILEPDGALYAGIAKRIV
                     LTNDWINLYANGQDWLDKPHFPFWITALSYTIFGINSFAYKFPAFLFWLIGIRFTYLV
                     AKKIYNENVARISVAIYVIALHGVISNFDVRAEPYLTTLTIGGIYYTYRLYKKFTWTN
                     LFASAVFAACAVMTKGIFILLTVAGGLIVYWIITRQWRQFRSARWWILGLLILIFITP
                     ELYCLYVQFDLHPEKVVYGCTGVSGLRFFFWDSQFGRFFNTGPIQGKGDPSFFLHTLL
                     WAFLPWSLLFYYAFIRLLRKKTRVKNPAQWIVYGSAGLSFLLFSLSRFQLPHYIIIFF
                     PQLSMMVADELASTEKARDQNTLLTVQKILVLLAVLAVAVASFYGRLPHGYIASGVAL
                     AVMIITFIRRKRRFMIDMLLLSYAFAIAVCLFLNLVFYPLILQYEAGMYAAKWLNQNN
                     "
BASE COUNT         8379 a         6727 c         6433 g         8378 t
ORIGIN      
        1 ctgaatgagc ggggattttt tttactgcga ataagccttt tccgaacctc gaagctctta
       61 cctcagttaa attcattttc tagggtgaat ggttacccta ataaaaaaca aattgcattc
      121 cgtaaataag atcgacaaaa aatacgaaca gcaaactgcg acgaatccac acgggcatgc
      181 cgtcaatatt tttgtcgcca cgcgatcatg ccgccaacaa gattcttcac atttttgaag
      241 cctatctgtt ctaaaaattg tgcagcgata ccgctgcggt tgccgcttcg gcaataggca
      301 actatttctt catctttcca ctcatcaata gcatccgtgt tcatatttct tatttcaccg
      361 agaggcaata gtgtgccgcc aatattgaag tcggcatttt ctgatggttc gcgcacatca
      421 aggaggtgga tgttttcgcc ggcatctaaa cggcttttta attcatcaac ggttatcgtt
      481 tgcataaaaa cttttttatt gactatcgcg cgcagcaggt tggacggctg ttgtatcccg
      541 caccggcggc gtggtgctta tccaaatatc catcaactgg cctggccgaa ttcgattatg
      601 cactgtctcg ccgctcggca attgtgtcgt gggcggcgga ttttgtttta cgatgtatgc
      661 atttgcggta tcggtcacag cgcctgtcgt gatgatcacg ccgacgccta cattatcgcc
      721 cgacaaatat tctcttgcct ggctaaccgt aaggcccacg aggtcgggca ctgcaagttg
      781 cgtttcaccg agaccgtttc ccaaaacaaa atcgatggca ctgctcatcg gaatctttgt
      841 acccggctcg attgtacggc cgttaaataa ctgatctttt actgcgttgc gtgcaatgtc
      901 cggagtataa cttgtgtcgc ctactttcaa accaagactt tctaaataca actgtgcact
      961 gcgaaaagaa aaaccgcgaa ggtcaggcat ctcgatcaat ggtggttgcg cgcgattgac
     1021 agtgagataa attgttcgat gcactttcac caactcctcc gattcgggcg attgctttac
     1081 aacggcaagc ggttccaaag tatctatgta aaccgaatcc tgcaccgcga cctcaaatcc
     1141 gtcctttttc aaaagagacg tggcatctgc tagtgttctg cctgaaacct gcggaacgcg
     1201 gatcgtttcg ttatgacgcg tgagcgaatc gagcgacata aaaaataaga acgcgatcaa
     1261 aagaagcagg gcaattgcca cgaggaagtt tactgcaaac gaacgtttcg taataaatct
     1321 aaacatttca gtattccagt ttcgaatcgc aaaaaactaa ttgttccagc attcttcaat
     1381 cagagcggtg taaaagtttt gcagcgtcca tcccattgcc ttcacttgct gtggtataat
     1441 gctggctgcg ctttggcccg gcaccgtgtt cacttcaagc atgaaaggct gagcgacagt
     1501 ttcgttataa ataaaatcta tgcgcactac cccgcgacag ttgagaacgg cgtagatctt
     1561 gcgcgccgct tgtcttacct tttcggcaat agtttcgtct acttgtgctg gtgtgatttc
     1621 ttcactcatt cctttatatt tcgcctcaaa atcaaaaaaa tcttttttcg attttatttc
     1681 agtaacaggt aacgtaatga tctcgccttt tgttttaaaa acgccgatcg ttaattcgcg
     1741 tcctgccaca aattcttcta tcaacacctg gtcatcttct ttcagcgctt tttgtaaggc
     1801 tccgccgatc tcagattcct gcgcaacttt actcattccg atgctgctgc caccattatt
     1861 cggctttaca aaaaccggaa gacggagatc ggcgaggatc ttagaaggct ccgttacctc
     1921 gttgcgaaaa atatgaactg actttgaaac atggatcccc gcaaaggccg cgaccgccac
     1981 tgtatagcgt ttgttgaatg ttaatgccga tgtggatgca tcacatgttg aataaggcaa
     2041 gttgatgcag tcgaaataac cttgcaattt tccgtcctca ccaggggtgc catgaatgca
     2101 catgagaaca ccgtcgaaac ttatcttttg atcgtcgatg tttatagaga aatcattctt
     2161 gtcaacggca atttgatcgc ctgcgtcggt tttgtagtgc cagccttcgg gcgtaatatc
     2221 gatcacgaac acatcaaact tatcgcggtc gatattatta ttaactgtaa tcacactttg
     2281 ataacttatt tctgcttccc tgctataacc gcctgttacc aacgcgatct ttttcttcat
     2341 gcattaaaat tatccggcaa agaaatacaa ataatgaaat agttggttga aacaattgtt
     2401 ataaacgaaa aggtgaagga gttccgccct caccttttgt cgacgggaaa tatcacccgc
     2461 ctttcagtgt cgcaataaag caacaagcat tattgatgtt ctaaggtagt gagtttttaa
     2521 ttcgaaaatc tattttctgc taaatgtgca ttttttcttt cttggccgca agttcttcta
     2581 cggtttcgcg gtacatttca tcgggcacgc aacagtcaac cgggcaaacc gccgcgcatt
     2641 gcggctcttc atgaaaaccc tggcattcag tgcacttatt tggggtgata taataaatgt
     2701 caactgcaat aggcgccatg cgttgctccg cgtcaaccac tgttccatcc agtaatgtaa
     2761 acggtcctct cacggtcgtc ccgtctgata tagcccattc aactccgcct tcataaattg
     2821 cattgttcgg gcattcaggt tcacacgctc cgcagttaat gcattcttct gttattttga
     2881 ttgccataga tcgaaaattt tgttcctggt aaaatatttt tgcactgtaa aaataaggac
     2941 taagaaatga atattgaaga aaggatcggt ttaacagtaa gacttggcga ttatttgtcg
     3001 atggacgatg aaacgttgcg ggcagccaaa gaaaacgcaa ggctggcaaa tccgtggttc
     3061 actgctgaat ttgttgacat tgccctgcaa aatatctcaa ataactttct gaaacgcgaa
     3121 tcactaaaca agtggctcga aggctatgat cttcaaacag aacttgcaaa acccaaaacg
     3181 atcggcattg tcatggccgg caatattccg cttgttggct tccatgatct cttgtgcgtt
     3241 tttatcagcg gccacaaggc attgataaag ccctcggcaa aagacgaagt attgatcaaa
     3301 cacatcgctg aaaaactttt tgaatgggat gatcaaacga aaaactatat cgcatttgca
     3361 gataatttaa aaaactgcga cgcttatatc gcgaccggca gcaataacag tagccgttat
     3421 ttcgagtatt actttggcaa gtatccgcac atcattcgct cgaaccgcac ttctgttgcg
     3481 gtgctggacg gaaatgaaac tgaagccgag ctttccctac tggcaaacga catccagcaa
     3541 tatttcggac taggttgcag aaacgtcaca aaattgttcg tgcctaaagg ttacgatttt
     3601 gagccgctac tacgtgcatt aagaaagtac gctcatttca tcgattttca caaatacaaa
     3661 aacaattacg actaccaatt agcgttgctg atgctgaatg gcaaatatta tatgacaaac
     3721 gattcgatca tacttaccga aaacgaaagc ccgttttcgg cggtgagcgt gttgaactat
     3781 gagtattata tggacattga tgctgtcaag gaaaaaatct cgggcgataa taatcttcag
     3841 cttattacgg ggcacggttt tgtgcctttt ggacaggcac aatcaccatc actttccgac
     3901 tatgcggacg gtgtcgatac gatgcaattc ctcgtaagtt tgagttccga ttgattcaac
     3961 gttgtaaagt cttaaaccat gccgctttgc gacggatcac aattgaaaaa gtttcatgtg
     4021 ccggcaaaac taaaatttgg ttataaaaaa aataattgtc attcaccaat atcgacttaa
     4081 tgtagtttag caatgatgaa aaaagtttta ttgatagcgt tcggaatttt caggctagcc
     4141 cattccaatg cgcaggaggt tgatacgatc ccgccttatc aaaaagattc atctcatata
     4201 ccggaattca cggtgttgaa attggacagc acttatacga atgacagatc cgttccaaaa
     4261 gacgagccgt tgatcatcat ttactttagc cccacgtgcg ggcactgcca gatcaccgcg
     4321 gaggagttca gcaaaaggat gcatgacatg cgaaaatatt tttttgtgtg ggtgagctat
     4381 tcgccgttgc ctgaaataaa agattttgca agagcgtatg gttttcagca ttacaataat
     4441 gtactcatcg gacgcgaccc gaattattat ctcccctctt acttccgggt aaagtttacg
     4501 cctttcattg cggtgtatga taaagaccat catcttttac agacgttcga gagaggcacc
     4561 gaagcagaca ctatcattga tttactgaaa gagcaatgaa ggtgaattgt gaatggccga
     4621 tggtgaataa atcgtcaggc taatgtgaaa cgatgtcacc gatcgaccgg aatacacgaa
     4681 aaaatttaac ccctttcggg gttgttttcg tttgtgcttt gtgtccccgg atgagatccg
     4741 gggctataaa gatgacgccc ttacgggctt taaatagccg cttgcgatgt gatgcgacaa
     4801 aattttcagt taaccaattt ttcgcatgtt caaaaactcg tgataacacc ttgataaagc
     4861 gactgcggag gagtcaaaca tcaataacct cttgtgaatt gatgcaataa aaattttacc
     4921 gtaaccgaat tgttgcatct ttcaaaattc ccgataacac ctaacgtttg attgtttgat
     4981 cgagcgactc cgaaggagtc aaacatgaat agccccttgc ggagcaaggg gtgcaattga
     5041 cgaagaccaa aagcaacccg tacgggttga atgatttagc gatcgatgcg ttaacggata
     5101 tccatttcgg aaatcttcga tcaatcggct ggcataaatt taccggtaac gctatctttc
     5161 gcgtttttta atccggctgg cggccctgaa tacacaacgt agccgccttt atcaccggct
     5221 tcgggcccga gatctattac ccaatcggcg ctttttatta catccatatt gtgttcaatg
     5281 acgatcacag agtggccttg agtgatcaaa gcattgaacg ccgcaagcag tttttgtata
     5341 tcgtgaaaat gcaggccagt cgtaggttca tcaaaaatga atagaatatg tcccccgggt
     5401 tttccgcgcg caacagattg gtcgctcggc cgcgctttac caagaaacga agcaagtttc
     5461 acacgttgcg cctcgccgcc acttagagtg tcgctgcttt ggccaagttt tatatatcct
     5521 aatccaacat cctgtaatgg catgagcgct tttgccagac ttttttcgtc gtggaaaaat
     5581 tcgatggcgt cgtcaacact taggtcgagt atctcataaa tatttttttg ccggtatgtt
     5641 acttccagca cttcttcctt aaatttcttt ccgccgcata cttcgcaggt taaatgcaca
     5701 tccgcgagga attgcatttc aaccacctgc tcaccttcgc ctttgcacgc atcacagcgg
     5761 ccgccatcaa cattgaatga aaaatgtttt ggctggaacc cgcgcatctt actcaatggc
     5821 tgctgtgaaa acagctctct tatttcatcg tacgccttta tgtaggtgac agggttgctt
     5881 cgactgcttc tgccgatcgg attttgatcc accagttcca cctggctgac aaattcaaga
     5941 tcgccttcga gttttttgtg aaagccggct ttctccccga actctccttt caacctgctt
     6001 aacgcgggat ataagatctg ttttactaat gtcgttttac cgcttccgct caccccactc
     6061 acgacgcata aaacattcag cgggaaatcc acatcaatgt tctttaaatt attttgacgc
     6121 gcgccggtca gttgcagcga atgttttgac ttgcggagtt tcgatggaac ggggatggtt
     6181 aactcccttc gcaaatattt tcccgttaag ctttctttgt tttccgtgat ctcctggaaa
     6241 tcgccctcgg ccactacttc gccaccaaga tgcgacgcca gcggccccat atcaatgata
     6301 tgatctgcat gatgcatcat catttcatcg tgttcaacta caacgactgt atttccggcg
     6361 tctctcagcc gtttcaagac ggcgataagc ctttcggtgt cgcgcgcatg caaaccaatc
     6421 gaaggctcat ccagaatgta taacgaattc gttagattac ttcccaggct tcttgttagt
     6481 tgaatgcgct ggctctcgcc gccactgagc gaattagcca ggcgatttaa agtaagatag
     6541 ccaagcccca catccagtag cgtttgcatc cgctgatgga tctcaatcaa gatccggctt
     6601 gcgacgcttt gctgataatt gcttaactgc aaattatcga accatcgttt cagatcattg
     6661 acctgcattt cacacagttc gccgatgtgt ttatcgccaa ccttaacata caatgcctcc
     6721 ttccttaaac gatatccttc gcaatcaggg catttggtgc ggccacgata ccggctgagg
     6781 agcacccggt attgaacttt atagagattc tgttctacct ctttgaaaaa atcgtcaata
     6841 ccatgtacac tcccttttcc tgtccacaag atcttgtact gctcatctgt aaggtcgcaa
     6901 ataggtttat gtacgggaaa gttgatggac ctggcgccac gcacgaattg ctctcgccac
     6961 caacctagct tctcgccttt ccatggcgcc acgccttcgt catacacgct cattctcctg
     7021 tcgggtatca caaggtccgg atcaattcca agcacctggc taaatccctc gcacgttggg
     7081 caagcgccat acggattatt aaatgaaaaa agatttggaa caggttcttc aaatacaatt
     7141 ccgtccagtt cgaatttatt gctgaaggga agcaattttg tttcgttcac atccaggaac
     7201 attgtgccgt cgccttcata aaacgcaata ttgatcgaat cgcttaagcg gtggatgtcg
     7261 tcttcatcga attcttttac aacgatacga tcaacgagaa cgtaagtgtt gcgtgatgat
     7321 tggtgagcga tcagtttttg cttcaggtcc ctgtcttcca tttcaagcaa atcgtcaatg
     7381 ctgatgactt cagacgcttc gtctcttagg tacattctcg aaaaaccctt ttgcaaaaga
     7441 atattcaact cttcgcgtgc ctgcctgttg gcgtgttgtt taaacggaac aaggatataa
     7501 attttacttc ccggctttgt acgctgaatt gcgccgacga cgtcctgtac atcgtctttc
     7561 tttacttccc tcccgcttac aggagagatc gttcttccgg ttcttccata cagcagccgt
     7621 aggtagtcat agatctctgt catactgccg acagtactgc ggggtgtcct tgtgatcact
     7681 ttttgctcga tagctatggc cgggcaaagt cctttaatga agtcgacatc gggcttcacc
     7741 atccttgcca tgaattgccg cacatatgcg ctcaggcttt ccgcataacg ccgttggcct
     7801 tctgcaaaaa gcgtgtccat ggtgagagaa gatttgccac tgccggaaac gccggtaact
     7861 acgatgaact tgttacgcgg aaacgaaacc gaaatatttt tgaggttgtg aactcttgcc
     7921 cctttgataa aaatattgtg ggttgttatc tttccatcat catttccatc tatatttaca
     7981 accgatttta tcgaagccat actaccgccc gcttgctgct aaatttatag cggcggtaaa
     8041 tatgcaaaaa gatgggttga aaaccgaaaa aaactttttc agcaaagatg atttggggaa
     8101 ttcgcttttt ttttacaaat tgcacacaat aaactcacca atcaagacaa aatcgtagcc
     8161 tatttctgaa cttctacccg gcattccact cataagttga actaaaaatc ctatgcaggc
     8221 gtggcatgct ttatcccaaa ggcacgatta tgaacacatg taacacgtta acagacaccc
     8281 agctgatttt gaatttccag gagggcaact gctctgcttt ggaaaccctg gtgagccgct
     8341 ataaagacaa actgttcagc agtattttgt tcctcgttaa agacaaattt ctcgcagagg
     8401 atcttttcca ggagactttt ttgagaatta ttgatacgct gcgtagccgc cgatataacg
     8461 aggaagggaa gttcctgccc tgggcgatgc gcatagcgca caatttatgt gttgatcatt
     8521 tccggaaagt aaaacgtact cctgccattc ttacgcagga caagaaggac atcttcgacg
     8581 tgatacatgt agtggtgaat gatcacgccg agcaccggat catccgcgat cagagttatg
     8641 accgggtcca ccagatgctc gccaagttgc cggatgagca acgcgaagtg atcgtgctgc
     8701 gccatttcgg cgacatgagt ttcaaagaaa tagcagaaac tacaaattgc agcattaaca
     8761 ctgcgcttgg aaggatgcgt tatgggctta ttaatcttcg aaaaatgatg ctcgaaaaac
     8821 agatcaattt atagcgtgat cccgagccta tttcattcag gcaaaaaaaa tctatttttg
     8881 taaagacaaa acaacaagat tgttattccg catgaggatg tttggatttg tgttttccct
     8941 taatatgctt acctgatatc aaattgcggc ataacattcc gggttcatga gccaggaact
     9001 cccccgctgt tgcgggggat tttttttctt gctacgagac agaattcgtt ctcggaacga
     9061 tggaacaccg gcaaactaat aaaccagtaa accaatagcc ccttatcctt cttccttttc
     9121 ggaaaaaact ctgcgtagcg aaatcgtcgg tgccgttgac acaatgagcg ggaatttttc
     9181 gaccgtaaca aaactgggat cgagtccgaa tcccctctcc tcactcaggc taacatcttt
     9241 aagccacaaa tgaagcttga caatgatcct ctcaaaaaag ggaagttcat tatcgctgct
     9301 taaaaatttt tccatcacta tgaactggaa atcgccgacg atgttgttgc gctcaagact
     9361 ttcatacctg ctcgtaatgt tcacttcgtt attggccacc aattcctcca ctactttgcg
     9421 gaacatgagg ttgatccttt gttgtacgcg aaaacctaac ctgaattcaa cccggatgat
     9481 atcatttgga ataatatggt ccaccgcata ttcagaagtg taagggtcat caaggatgtc
     9541 tacatgcacg aaccagtaaa tatctgcacg tttaggtttt ttattcagga tagagtaaat
     9601 gatcttatgt tctatttctt tcggattatt ggcacttgtt aaatatacca ggtgcgttga
     9661 atatttcggc accgacctgt cattgctcaa ttcctggatc atgggaatgt aatgatcgag
     9721 ctttacgaac tcaacatacc ggttcttgat cttgcgactg cggtaccaaa cgtacataac
     9781 gaaaaacaac gcgccaccag caatgaacgt gacataaccg ccatgcggaa atttttgaag
     9841 gttagcagtg aggaaagaac cttctatcgt tatatagaca gcgaggtata aatatatcca
     9901 gaacggcagt accctgcggc ttatcatata gtttgcaaac aggatcgacg tgcttatcat
     9961 gcacatcgta atagcaagcc cataagcagc ttccatgttg atcgaccttt cgaaataaag
    10021 tacaatgcca acacacccga tgaatagtag cgcattgatg ccgggaataa ataactggcc
    10081 cttctcttcc gtcggaaaat tgatcttcat ttttggccac aagtttagcc gtagcgcctc
    10141 gccaattaaa gtgaatgaac ccgagatgag ggcctggctt gcaataattg ccgcagcagt
    10201 tgcaattaca attccaattg gcctgaacca gtgaggcatc atgccgaaaa aactattgaa
    10261 cgaatcagcc atcgggccgg cgatttgtac acctctatag ttcgccaaca gccatgcccc
    10321 ctggccgagg tagtttaaaa taaggcatgt tttgacgaat atccacgaag ctcgtatgtt
    10381 gccacgaccg cagtgaccga ggtcggagta taaggcttcc gcgccggtgg tacataggaa
    10441 aactgcaccc aatatccaga aaccttttgg ataggcagtt aacaattcga ccgcatagtg
    10501 aggacttaag gccttgaaaa tatagatgtc atcggagata tggaagatgc caagaacggc
    10561 aagcatcgca aaccatagaa acatgatcgg gccaaataac ctgccgatgg agatcgtacc
    10621 gaattgttgc agaaaaaaca atgcgctgag gatggcaagc acgataagca caatcgtttt
    10681 tgtagtgatg tccgaaaaaa aatggatctg ctttaacccc tccactgcgg cggttacaga
    10741 aattggagga gttattatgc catctgcgag tagcgcggcg cctcctatca tggccggtaa
    10801 cacgagccat tttttttggc gccttacaag agcatacaaa ctaaatatcc cgccttcgcc
    10861 tttgttatct gctctcaaag tgaggatgac atacttgacg ctggtctgca gggtgagcgt
    10921 ccaaataata cacgacaaag atccaagtat cagcttttca tttaccagtc gaccgttcac
    10981 aatcgcattg agaacataaa gtggcgatgt gccgatgtcc ccgtagataa ttcccagtgc
    11041 aataagaata cccgcagccg ttatgcggtt aatttgcttg ctcacttgta acaattgaaa
    11101 cttgttccat ctgctcgacc gctcctatgc aattacactg caaagaaaac acgttagagc
    11161 gagagaacag gaacaattat tcttcaaatg gctcggtaaa gattcgctgc aaagggatcc
    11221 gcggcaacgc cgaaaccata agcggaaatt tttcgacggt cacgaagctg gggtcaagcc
    11281 caaaaccttt ttcttcattg aggcttgctt cttttaacca gaaatggagc ttcataatga
    11341 ccctttcaaa gaacggcagt tcgttgtctt gtgaaagata tttttccatt acaataaatt
    11401 ggaaatcgcc gaccacatta tttcgttcga ggctttcata ccggctcgta atgttcactt
    11461 cattgttttt gaccagttct tccaccactt ttctaaacat cagattgatc ctttgctgta
    11521 cccgaaaacc aagcctgaac tcaacacgga taatatcatt cgggataatg tgatccacca
    11581 cataattaca ggtataaggt tcgtcgatcg tgtcaacatg aacgaaccaa tagatatcgg
    11641 ctcgcttggg ctttttgttt aatatcgagt aaatgatctt gtgttcgatc tccttcggat
    11701 tatttgcgct cgtcatatac accaggtgcg tcgtgtattt tggaacactc cggtcattgc
    11761 ttaattcctg tataagcgga acgtagtgct cgagcctgac gaattcaaca tagcggttct
    11821 ttatctttct cgcccggtac catatgaaca tgacaaaaaa cataagcgtg gccagcaaga
    11881 cggtgataaa gcctccttcc aaaaacttgt gtgcaagtgc tgccaggaac gtaagttcca
    11941 ccgtaaggta gaaagtgatg aaaatgtaaa tccaaaaagc cttgagcctg tgcaagacga
    12001 gatagtttgc aaaaagaatt gttgtggcga tcatcgtaat tattatcgcc aacccataag
    12061 cagcctccat cctggaagac tccttaaaat acagaactac acctatacac ccgagaaaca
    12121 taagcaggtt tgtgctgggt atgaacaact gtccccttgc ctccgaagga tatttcactt
    12181 tcgtctttgg ccaaaggttc aatcgcagcg cctcgccgat tagcgtaaac gagccggcta
    12241 ccattgcctg gctggcaatt atagcggcgc tggtagcaac aacaactcca atgatcacga
    12301 accaatcggg catgagatca tagaaactat taagatgaag ttgttctttc acctggtcgc
    12361 ttacagttat gccagaccgg tgtgcaagta aatacgcgcc ttgcccaata taattcaaca
    12421 gcaaacacga ttttacatag atccatgaaa cgcgtatatt accccttccg cagtgaccca
    12481 agtcgctgta taaggcttcg gcacctgtag tgcaaagaaa taccgcgccc aataacacga
    12541 acgctccttt atagtttact aaaaaattaa tagcatagac cgggttaaac gctctgaaaa
    12601 ttgatagatc atccagcaaa tgaacacaac ccagcacggc gatcatggtg aaccagataa
    12661 acatgatcgg tccgaaaagt cggccgatgg agccggttcc gaattgttga aaaaagaaaa
    12721 aaatggctaa tatgcccagc actatataca taatagtgtt ggctgaaatg tcatttactg
    12781 ccggtatgtt cttcaatcct tcaatggctg atgttatgga gatcggcggt gtgataattc
    12841 catcagcgag caacgacgcg ccacctatca tggcgggtat aacaagccat cggcgcctgc
    12901 gccgcacaag agcgtataaa gcaaaggttc caccctcgcc tttattatct gctcttaaaa
    12961 ttagaactac atatttaatg gtagtttgaa gggtaatagt ccagatgata cacgacaggc
    13021 tgccgataat taatgcttca tttactaacc tgccatgaat tatcgaattg aaaacatata
    13081 agggtgaagt tcctatgtct ccgtaaataa ttcctagcgc aacaacaaga ccggcggctg
    13141 taactctgtt gatacttttg ttcacaaata tgaattgaac ccagcttaaa ttctgtacaa
    13201 atgtatactg aaatcacttt atcactcgtt cttattgcag ctaaaaaaaa ttacaatggc
    13261 ttagttaata atcaactaaa cactttttta aaatcttaca tttgttagcg ttaattaata
    13321 agcgagatga tacaaaaagt tctcctaact tttctggcac ttaccctatt acacctgttc
    13381 tctcctgccc aaaggatctt ttattccgaa cctgaaaaag acgatgttcg ctctattgac
    13441 ttcgacataa ttggcaagtt gaacaaccag tatcttgttt ataagcaggt acgcaactcg
    13501 cacgctattt cagtttatga taactctatg aaattattag agcgtgtgaa tatggatttt
    13561 cttcctgaca aattaattaa ctcggatatt attgcttaca aagacttttt ctacttcgta
    13621 tatcaatatc agaaaaaaaa tgttattcgt tgtatggctg cccgcataga tgccaacgga
    13681 aaaatcatgg gcgacccgat cgttctggat accaccgcca ttagtttttt cgccagcaac
    13741 aaggtctaca atgtgttata cagtgaggac aaacaaagga ttgctgttta taaactaaat
    13801 aacaaaggcg accagcaata cgtgttttca tgcagcttat tcgatgattc tttggcgcac
    13861 ctttcttcat acacagcctt tattccaatg gagcagcaca acgattttct cactgaattt
    13921 tcgctcgcca acgacggcac gatcgtgttt gtaaaggctt ccggaaattc gcagaacagc
    13981 aacctggaga atcttgcact gatggtgaaa gaaccagaag ctgaaaggat tttttcttat
    14041 ccgctggata tcgggaatat ctttttagat aatattcgtg taaaagttga caacaagaga
    14101 aaccattttg ttgtgagcgc gttttattca aaacagaaga gagggaacat agatggtttg
    14161 tattgtgcag tttgggatga aaccgataca tcgcttattg cagcaaaaca ggtcccattc
    14221 aacgacgagt tgaagagtaa cgcaaaaagc gagggttctt cccggtcagc attcaacgac
    14281 tacttccttc aaaacatctt cgttcgcaag gacggtggtt ttgcgatagc agcagagtct
    14341 gcttatacat catcacgcgg agtttataac tcgcggtggg attacatgta taattcgcca
    14401 tactggtata attccaattc ctacctctac ggaagtcctt acagttatta ttacccgtgg
    14461 acaagcccgt atggctacgg aagccagtcc acccgttatt acgcagataa cattgcggtg
    14521 atcgcattcg attccaccgc caccatggaa tgggcaagca taatcccaaa gtcgcaatac
    14581 gatgataatt ctgacaactt cataggatat ggaatatata ttggcgcggg ccaggtgaat
    14641 tttctgttta accagttcga acgaagaacg ttgttgcttc aggcagaaag catcgacccg
    14701 aatggtaaag ccgtacttgc cccgacgcta aaggagcttg acaggggata ccagttcatg
    14761 cctcgctatg caaaacaggt tagcagccat gaagtattgt taccctgtca atacagaagt
    14821 tatctttgtt ttgctaaaat cgatttttaa agcaagcaag tggtagcatt cttcagggac
    14881 aagtcgggcg tcgccgtttt ttggcttatc atattatgct ttgggctgca cgtttattcg
    14941 ttgatcaatc cgccccattt aatagtgaac cccaacgagg gtttttttta ttacctagtg
    15001 agcccgttca caaacctgca gccatacacg ctggcgatga tgtatgtgat cctgattttc
    15061 ctcaccgcgc tgcagttgaa ttttgtaata aatgatctca agatgctgcg gaaagaatct
    15121 tatacggtcg ccgcagcttt tctgctcctg tcatccctgt tacccgcctt caaccagatc
    15181 tcgaccgcgt tacttgcctg caatcttttg atttggatca tgcatggctc ttgtcgcctc
    15241 tacaacgcca cgaacccaag acccacgatc tacaatttgg gtctcttaac aggaattgct
    15301 tttattcttt attacccctt actacctgtg gtgataattg ttttaatcgc ccttgttctc
    15361 atgcgcacct ttcgtttaaa cgagtggttt gtcctcattt ttggaattct cacaccactg
    15421 tacttcttag tggccatcct ttttttaaaa gataacctgc gcgtattgcc cctgccggag
    15481 cagttgctca acttaacggt tcctcctttg aaggaattac cgatcctgat cacaacgctt
    15541 gctgtggcaa ccgcaattgt attgtttggc gtcttttctg ttcagcaaga taaacgcgac
    15601 gtcatgcagg tacgtcgaag ctggacggtc gttttcgttt ttcttatatt ttctattccc
    15661 ggtgtgttgt tcattcagca tgcatggccc acggcgcttt tattggtaat ggtccccgca
    15721 tcgtgctata caggatttac cttcagcgat tcttcacgcc acatttttgc aacgatatcg
    15781 ttttgggcgc tcctcgcctt gacgatttat aacaactggt ttgcaaacta ttaagggatt
    15841 ttagggtcag acattttact tttgtgtcct gttaaagacc tggtttacga aatcttcact
    15901 tcaccagctt atttgtgatg ttgttcggat cggataatct ttaaaaacgt tacacatgaa
    15961 atttggcatt gttgtttttc ccggatctaa ctgcgacagg gatatgcagg atgctcttca
    16021 gaacgatctt aataaagaag tgatcatgct ctggcataaa gacagagacc tttcagcttt
    16081 cactaacgat gattgcattg ttttacccgg aggattttcg tttggtgatt atttgcgctg
    16141 cggcgcgatc gcgcgtttaa gcccgatgat ggaaagcgta atcgagtttg cgaataaagg
    16201 aggcaaagta ctgggagttt gcaacgggtt ccagatctta tgtgaaagcg gcctgttgcc
    16261 cggagtactt ttagctaacg gcaaccaaca gtttgtttgc aagaatgttt ttttgaaaga
    16321 taacaatagt gagatctata agatcccgat agcgcacggc gacggccggt attttgccga
    16381 agaaccggtg ctcgacgatc tcgaaaaaaa tcagcaggta ctcttttact attgtgatga
    16441 aaacgggaat gtggacaaga gttttaatcc aaatcatgca atcaggaaca tagcaggtat
    16501 ccgcaataaa gccgggaacg tttttggcat gatgccgcac cccgagcgtg catcttccgt
    16561 tgcgctcggt aatacagacg gaagaaaaat attcagcgtc ctcggattaa attgatcccg
    16621 aatgaaaaaa atcttcatat tactctttgc aataattagc gcgacaatac tgcacgccca
    16681 agtgcttgat cctgttaaat ggaactatag cgctgaaaag aattcggata aggaatatac
    16741 ggtcacgatt gctgcaacgc tttcgcctgc gtggcacatc tattcgatgc acacaccggc
    16801 agatggcccg gtcccaactt ccattagctt caataaaaat ccacttgtgt tattaagcgg
    16861 tgcggtaaaa gagaatggga aattgaagac cgagcacgac gatctgtttg gtgtagatgt
    16921 gaaatatttt gccgacaagg ttgagtttgt tcaatcggtg aaattgaaat ctgcagtaaa
    16981 aacaaatgtt tccggaaata taaaatatat ggtgtgtaac gacaaaacgt gtcttccgcc
    17041 caaaaccatt cctttcaaca tccagcttca gtaaatgcaa gcaccaactg catgaaaaaa
    17101 aaattatttt tcattgttgc gcttgcagct tcctgtcaaa tcctgtttgc tcaaaacgat
    17161 ccggttcatt tttctttttc cgccgaaaga aaaaatgatt cggttgttta cctggttgta
    17221 cgcgcaaacg cggaaagaga ttttcttttg ttctcaccaa aagctcaaag caaagacgac
    17281 gcttttgttt cgcagttgta cctggacagc gcttcgtcaa agtatcttgc cgatacaaac
    17341 atcatcgagt cgaagaactt tcagatcgta aaagacgaat ctacaagtac gagctttaag
    17401 gcgtttgctg acagcgcggt ttttcaatac ccgcttaaac tgagatcaac agacagcgcg
    17461 actattaaag gctcgttcag ctggcttggc aaaaaggcgg atcaatttcc aaatggtgaa
    17521 aaaacgttcg agctaaccat acttccggtc aactcatcac tcgcagatgc gatagtcacc
    17581 aacgaagcgc cgaagggatg gctgaatttt ttctggatag ggctggcagc cggtttgttt
    17641 gccgtttttc ttccatgcct ttacccgctg ttcccggtca ccgttaccta tttcatgcat
    17701 catcatggca accgccgtca aagtatccag agtgcttttt tgtattcgct gtcgatcgtg
    17761 ctcatctatg gcatccctac cacattgctt actcttgcgt ttggtgaaac tattttgtat
    17821 aaaatcgctg tgcatccggt caccaatctt tttttcttct ccatcttcat tgcctttgcg
    17881 ctttcgtttt ttggattgtt tgagatcacg ctgccatcct cgtggtcaac gcataccgat
    17941 aaacttgcag gcaagggcgg atacgcgggc atatttttca tggcgcttac actggtgatc
    18001 gtttctttca gttgtaccgg cattgttgcg ggtcagttac taagttacct ttcatctgaa
    18061 ggtgtggctg cggggccgat cgcaggcatg tttggttttg gaaccggact cgcgctgcca
    18121 ttcacggtgc tcgcattatt tcccacgctg atgcattcca tgcccaaaag cggcggatgg
    18181 ctgaatacag ttaaagtcag ttttgcattc atcgaacttg caatggcatt gaagtttcta
    18241 agcaacgtgg acctgatcta tcactggcgt gtgctcgatc gcgaaatatt cattgccttg
    18301 tggatcgtac tcgccgtttt acttggattt tatttgctcg gaaaaataaa attctatcat
    18361 gacaccgatg tgaagcatgt gggcatgatg cggttgtttt tttctatcgc gtcgtttgcg
    18421 tttgcatttt accttttgcc cggcatgtgg ggcgcacctt tgaaagcgct cagcggatgg
    18481 ataccgcctg attacacgca ggatttcaac ctctacgatc ctaatacaaa aaatattgtt
    18541 tcatcagcac aaaaagaaga gaccggtgta ctcccaccaa agaaaatggc ggacaagatc
    18601 gcggcgccct acgggttaac agcgtattat gatcttgacg aaggaatcgc tgccgcaaaa
    18661 cttttacaca agcccatcat gctcgacttc accggctact catgtgcgaa ttgcaggaag
    18721 atggaagcac aggtttgggc cgatcccgcg gtgttgaaac ggattgccga aaattttgtg
    18781 ttggtgagtt tatacgttga cgaaccgtct gacttgccgg ctaacgaaaa atacgataac
    18841 gaaaaaggcg aaagaatctc aaccgttggc gaaaaaaatc tcgactacga gatcaataag
    18901 tttggcttta atgcgcagcc tttgtatatg ttcattgacg caaaccaaaa tccgctaagc
    18961 aatatcaaat acggttatga ccctgacatc aataagtttg tccggcatct tgatgaagtg
    19021 aagaaggtgt ttgagcatga gtaagcaagg gttgctttag tctttcactg ccaccttata
    19081 acgccttttg aaaaccaggc cgcctggttt ataagtgttt ctttttggtg caatatcttg
    19141 aacgattgac ctggcttaca cgaaatgtat gggaaaacaa acgttcgcat ttgaaggtgt
    19201 tattcgccat gataaatagg acggtttcga accgtttcca aataaaataa accaggcagg
    19261 taacctgtaa tttttacaca atacagagcg tcttttcttc acaaagaatt atcgtatttt
    19321 ctccgcatag ggcataattt tttctgcgat tttctaaacc attgaccatg caccaggcat
    19381 ctgtaaaaga taatgaagag aaatggctac ttgaagtgtt gcctaccata catgagctga
    19441 tcttctacct tacgagactt aacgacagca tcatggttta tgtgaaaaaa atttacaagg
    19501 accccgacga gggatctaac gtatatgaaa tgagcaatgg attatcgtat acgcacgacg
    19561 gccagggcag gtggcgtatc gtgtaatttc tctcgcatat cgcactaacg gagtcacagt
    19621 tctaaaaaag atcaccgcaa tacttgcgcg ctggtaattc cattctatat ttaatgccga
    19681 taaaatgcgc ttatgaaata tgtcgccggt tgcctgctgt tgttactggc aaaaccgtta
    19741 tctgcacaat taaaagccga ggacgtacac gcattcacgc ttagcaatgg catgaagttt
    19801 cttgttatgg aggacaattc gattcccaat gctaacatgt atttgttttt taaggttggg
    19861 tcgcgcaatg agtacacagg catcaccggg ttgtcacatt tttttgaaca tatgatgttc
    19921 aacggcgcca aaaaatatgg gccgaaaatg cttgacaagg tggaagaatt taacggcggc
    19981 gccaataatg cgtataccac ggagaatgta acagtttaca ccgactggtt tccgtcatcg
    20041 aaactggagt tattttttga tatcgagtca gaccgcattg ccaacctggc gtttgattct
    20101 gccatgatcg aaagcgaaag ggaagtggta cactcagaat ggcgcaccga ccttgaaaat
    20161 tctccgtggg aacctttgag ccaggccgtg ctgggagtag ctttcaacca gcatccgtat
    20221 cactggcctg tgatcggtta tgaaagtgat attaagaatt ggacaaagga cgacctcgaa
    20281 aaatatttca aaacctatta cgcgccgaat aattgcgtgg tggtgatcac gggtaatgtt
    20341 agcctggacg aggtcaaaaa attagcacag cggtatatgg agccaatacc tgcgcagccg
    20401 cctgcaagac ctgttcacat tatcgaacct ccacaaaccg gcgaacgcag agtggttgtg
    20461 caaaaggacg tgacaactcc ctatttaatg gtgagttatc atgtgcctgc cacaaaagat
    20521 tccgactact atgcacttga cgttttgaat tccattttat cagaaggaaa ttcttcgcga
    20581 ttgtattcat cccttgtaga ccaaaaacaa ctcgcaacag atgtgtttac atacctcccg
    20641 ttatgtttcg atccttttga gtttaatgtg tatgtcgcat gcaatgaggg tgtaaaggaa
    20701 gcggacgtcg agaaagcaac ttttgatgag atcgataaaa taaaaaagga cggaattaca
    20761 ccgaccgaat tgcaaaaagt gaagaaccag aaattgatgg atttctattc cgacgtcgaa
    20821 acgatcaatg ggaagtctca aaacattgga aactatgaag tgttctttgg cgattataga
    20881 aaaatgttca atgctcctgc tgcatataac aatgtaactg tcgatgacgt aaagcgggta
    20941 gcaaaccaat acttcaaaaa atcgaacagg acagttggca ttctaaaatc taatgtagaa
    21001 aattaaggca tgcaaaaaaa ttcgcaggtg gtgttggtgt taatgttctt attaacggca
    21061 accctaacaa aagcacaaac gaatcctcgt tacaaactgc ctggttatca aaaattccaa
    21121 ctgcagaacg gcctcaccgt ttacctcatg gaaaaacatg acgtgccaat catgagtatt
    21181 gacatggtgg ttcctgccgg cgcaatttat gatggtgaaa aagcagggct cgccagtctg
    21241 actgctgcat gtttaaaatg cggaacaaaa tcctacacaa aaaaacagat cgaagaggca
    21301 tttgattttg caggcgcttc gtaccgcatt tccggcttaa aggaagtggc cgatgtaagt
    21361 gtggaactgg cagtaaagga ccaagccaaa cttttaccag tgataaagga gttattggtt
    21421 gatccaactt ttccggaaga tgaggttgat aaagaaaaga aacgcgagct ggttaatttg
    21481 aaccagtcaa aggaaagtcc ggaagatgtg atcgacctgt attgggataa attctttttt
    21541 ggcaatgctg cctacggtaa tatcgtttca ggaactgtgt cttcgctcac tcccctcact
    21601 tctgccagcc tcaaaagttt ttatgcatcc cgctactcgc cagccggttc agcgatcgct
    21661 gtcgtcggcg attttaaggc tgacgaaatg aaagctacga tcacaaattt gttttcaggc
    21721 tggaagggat cagcaaacgc aagcagtcaa aatccttcac tgtcttttga tccgccagct
    21781 acaaaaagag tactgcttgt aaataaggag gacgcaaaag aaacaacact tcttataggt
    21841 gggatcggtg ttaccaggaa taatcctgat tacctgccga tccaggtagt caatactttc
    21901 tttggaggca gatttacatc gtggctaaac gatgagttgc gtatcaaatc aggacttacc
    21961 tatggcgctc gcagtacctt tacaacgttt aaaacaagcg gtgtgtttca gatctctaca
    22021 catacggcga atgagaccac ggagccaact atcgacaaga cgcttgagat attgaatcgt
    22081 ttacacgata aaaagctgga cgaggaaacg ctcacctcgg ctaaaaacta tatgatcggt
    22141 ttgtttcccc cgcggtttca aacgacagag gagctcgccc acctgcttac caatatgttt
    22201 tggtacggat atgatgaatc ctacataaat aattttgaga cgaacgtaaa tgcagtaacg
    22261 atggaaaaag caaacgcgat catcgaaaaa tattttttaa aagacagttt gcagttcgta
    22321 ttgataggaa aggcttcaga aataaaaaag atcgctgcta aatatggctc cgtcacagaa
    22381 gtccaaataa aagacgatat tggaaaagga ttcgaacatc cacgtctgtg acaccgaccg
    22441 aaagaaaaca tcagcagcgc gaaaacgccg acctttgggc aaggaataac caaaaataat
    22501 tttcaatgaa aaaattttgc acagcagtcc ttcttgtcct tttatcattc ggctgcatga
    22561 atgtaagcga ggacatcgac gtcagtgcaa acggagccgg cacctactca gaagagatcg
    22621 acctgagcag tttgctatcc ttcgtcggag ctgctgcctc tatggattca tcggctgaaa
    22681 attccacttc aatcccggat atggatagca ccatcagttt aaaaagtttt gctgacacgt
    22741 ccacttcgct tacagcagac gagaagcaat tgctgcaaaa tgcgcacgtt agaataacta
    22801 ccaaccaggc cgataacatt tttaaaatgc agcttgtctt tcctttcaaa aacatgcagg
    22861 atctgcaaaa attgctggcg ttgaattcgg gaacaagcag catgaacatg atgatgaaaa
    22921 gcgcaggtct tgacaaatca atgccgacag ataccgccga tagccaaatg ccggatctct
    22981 catctatcta cacaaccaca tgcaattcgg gcatgatcga caaaaaaata aatcaagaaa
    23041 aatggaaagc tatgcaggaa aatgagcagt tcatgcaatt gcaacaatcg ggtgagatga
    23101 tgaaatcgta cacgtataca accacgatcc accttccgtc tcccgcaaaa aaactggtcg
    23161 gtgaaaaggc cgctttatct tcggataaaa aaacggtcat catccagggc accattgccg
    23221 atatgaccag ccatccgcaa ttatttgcgt atcacgtcga ctattagttt tttgagagct
    23281 gcgttatcgg tttttgtaat cttcgcgcac aggatagaat acgtcaagta tcttaacgtc
    23341 tgtgatcgct tttcccgcgt gctttacgtt tgaagggatc accagtatct caccaggacg
    23401 cacgaccacc acttcgccag caaccgtcat ttcaaatgtg ccttcaatgc catttacaac
    23461 ctgctcattc acatgcgagt gctccggcac agaagcgccg gcttcaatac gccaaaaggc
    23521 aagtgtcata ttatcggtgt ggatcaaccg gccaaaataa ccgggaaaaa tttctttctc
    23581 agggatagac tctaacggta atgttgtcat cgtttttatt ctggttaagg atacataata
    23641 tcaaatgagt cgggtatgat ttggttgaga tgatgtttga gatggcggtt ataatcgtgt
    23701 gcaagccatt gcaaggtgtg caactcaggc acctctgttc ctgtatcgca attcatgttg
    23761 tagttctcga cattcatatt ttgtaagacg gcgcaaattc tttcattcat caacttccat
    23821 agcgtgataa tgtcttcctt tgacattgca ccatagttgt tggctgacac ccagaagttt
    23881 tgcatgtaaa tgatctttgg cggcttcttc tcgtattgtc cgcaaataaa tctgcgcagg
    23941 ttattctgag ctgaatctac gaggtgccca attacctcct tcctggtcca tttgcccgcg
    24001 ccgcgttcgg cggataattc ctcgtcggac agatcgtgga atttttttga aaactccgca
    24061 acaatgtttc gtaactcggt aattgttttt tccatcgctc aaattgaaga tatatttaat
    24121 cagaaccctt caaacctttg ataagaatat tttgttttcc ttctacggta cacggcaatc
    24181 caaattcttt caacctcgtt ttttcgttat tgatggtctt gtagaaatca tccaggtaac
    24241 ccgtcgtttc tttgatatat ttcggaggca acaaactgca acctgtgtag acctggtaga
    24301 tcttctcttt taactcgtta taaaatttta ttgtttcatc aaaatcagtg tatggaaggc
    24361 aataaccccg atagatccgt acacggacgg aaggaattcc caactgttcc gccgggactg
    24421 cgtatggggc attgatgatc ccggcatgat cgaaatcgta ggccacagta tacggaacgt
    24481 gcgtggaatc aggcgagatc aatttgatat tgtgcaggta aggaatggac cagtccgtat
    24541 ttcctatgag gtattcgaac aatgtcattt ttaaatattc ttcgtgatca gttgcctgtg
    24601 gcggcaccat tttccttttc agaagaattg caccgtttcg cgcagccatc tcatcttcgt
    24661 cctcaagcaa aataccataa tgcgaatcaa cctttaattt cgctgatgaa tcgatgtaat
    24721 caacttttac aagtcttgcg cgaaaacttt tatcgcttac caggttgtat aatttataaa
    24781 cgagccattc acggataaca tactgatcgc cctggcagtg ggtgacgagt ttgagttttt
    24841 cctggttcat gaacagtccc gttgaatcgt catgatgttt tggaaaattt agccatagag
    24901 gcggaaaaat gcaattactc ctgtctttgc gaaaattacc acgtgccttg atcttgacag
    24961 gaatggaaac gtctacgcta tcgctattct tgtagctaag tctggccggg tgatagccag
    25021 gatcatcgtc gcggtctttc tgtactgcgc gaaaattcgc agacaatcgc agatgcagca
    25081 attgttcatc tttgaacagc ttgcttgctg atacgttacc ttttgatgaa gaaggctcgt
    25141 ctgcagcctg cgcatataaa gaataaaaac tgatcgcgca aacgaaagcc aatacagccc
    25201 ggcaagtgct cgatggtttc aaatcctggt ttttaaagaa gaaagataaa catatttgtc
    25261 agccatacaa accgctaaaa cgagcgtctg tatcaaattt tttttgtcga tacacgagcg
    25321 atttgcgaag gctaactgtc cccgccactt cccatttcac atgatgcggg caaatctgca
    25381 atctgcctca aaaaacaaag ccaccggcta attttgaaca gtcgatacaa ctggcaatat
    25441 ctgcaagcgc accacggcac gctgcctccg gaacagaaag agtgctcact catgattccc
    25501 gacatgtaaa acgggaacta ttgcaataag atttttcggc tgcacttccg gagaactgtt
    25561 gggcgagacg aacaaatgca cctcctctaa tatcttaagt atccccttac ctccgataag
    25621 ctgggattta tgcgcgacga agacaaatta attccacact ttagcggtgg caattacaca
    25681 gcttgcacgt agattccgtt aacaatattt tgcggtttcc tcgtcctgca cctttatcgg
    25741 gaacaaaagg aggaaaattt tgtacgcatt atggtattaa ttcttcacct gcagacggtt
    25801 ggccctggaa aaaggcaggt agacgtctgt aaacaagata atggcatggt attttgaata
    25861 tacagtttat tcgataacct ttaaaattat aagttatgtt acgttggact gtgatatttc
    25921 tgatcgtcgc cattattgct gcaatatttg gctttggcgg tatcgctgcc ggagcagccg
    25981 gaatcgctaa gttcttattc ttcctgttca ttgtactttt catattgtca ctgattttcg
    26041 gaaggagggg aactgttaca gacgatattt aagtaaggta gcaaactacc ttattaacgg
    26101 cgtaagcatt agcactgctt acgccttttt attatcttga gccgtgaacg ctcagcatgg
    26161 caagaatcaa agtcgacctc cacaacattt ataataatgg cagcgcaatc gaccaggctc
    26221 tgcaaactgc ttttgaagaa gctatcagca aaaagatccg cgaaatagaa atcatacccg
    26281 gaaaaggatc gggacaatta cgaaaaaagg tcgaacgttt tctgcagctt ccgcatatca
    26341 aacaatcata ccaccgcata gaaaacgata gtaaaaattt cggaagattg ttcgtgtatt
    26401 tcaaattcta gtcttcctcg aaactattgc tcaggagaat attttcccat tttactctat
    26461 tttgcgcaaa tctgtcttca aactgtttat atgaaatact gtctttgcct gttttttatt
    26521 gcttgtcttg ttgaattaga tgcgcagcag aaatttgaac cgcctgccac agccgcgatc
    26581 cctgtgactg acactttaca tggcgtatta cttactgatg attatcgttg gctcgaagat
    26641 aaatccgatg agaaagtgat cgaatggaca aaggcgcaac atgattatgg cattcagtat
    26701 ttgcagtcga ctcagaagac acacgcgggg ctgcgtgaag atattgccaa ctacatcgac
    26761 ctggattatg aagggccgct tgataaagaa ggtaaacgtg tttttcaaac cataaagcgg
    26821 aaaggcgaca aacaatcgaa actgtatacc attgtcgacg gaaagaaaaa gttgatatgg
    26881 gatcccctgc agttagacac ttccggaaat actgctacca cgggattagt gtatacttat
    26941 gatggcgagc gtgccgcgat cagtgtacaa aaaagtggcg gagagatcac cacaacatat
    27001 ctcatcgaca caaagaccgg aaagatcttg tatccgccaa tacagaacac gtttaacttt
    27061 cagtgggcga aagatcagca acacgcgtac ataacgctgc gcagccagga cgatgtgaat
    27121 aaacaacttc cgctaaaaac gtattggtta acggttggcg agcctgcaga taaagcgatg
    27181 ttcatcggca caacgaccga tgcagaaaac agctactttg tatatgacaa ccgttacagt
    27241 gacgtcagct tttatggtga aagtaatttt tggtcaaata aggcttatat aagaaatacc
    27301 ggtgtcttcg acactggtaa attgatttat gaaagcagga aatccaacgc atatcccgat
    27361 gcgatcggcg ataagctgta catttttacc aatgacaatg cgccgaacta caggctgatg
    27421 gtcgcagata agaacaaccc ggagtacaag aactggagag tattgatccc tgaaggtgaa
    27481 acagtactcc agaattatat cgtcacgaaa aataatatca tcatccagga taaacaggat
    27541 attcaaagcc ggttgacgct ttatgatctt tcaggaaaaa aaatcaaaca gatagagctg
    27601 ccggagactg gaaatgtaag cagcataaac tatgaccgcg aagaagattc ggtttatttg
    27661 acactaaaca ccttcacgtc aacgccgaag atctttgttg cttccgcctc cgattttaaa
    27721 tggcgtttat attatcagcg aatattgcct gttgatatga gcaacattgt tggtgagata
    27781 aaatttttca aatcgaaaga cagtacaaaa gtgcccgtgt tcgttgtgca tcgaaaagac
    27841 atgaagcttg acggaaataa cccggtgttg ttaacggcct atggcggatt cgacgcaggc
    27901 attgaaccac agttttacgg attttatgcg gcgctgatca accgcggctg tgtaattgtg
    27961 gaggccggta ttcgcggcgg cgatgaatac ggtgagaaat ggcacgagga gggtatgctg
    28021 gcaaacaagc aaaattgctt tgacgatttt aatagttgcg ccgaatggct tgttaaggaa
    28081 aaatacacga cacctaaccg gcttgttgct atgggggcaa gcaatggagg gctattgatg
    28141 ggcgcgatcg cgactcaacg gcccgatctc tataaagcaa tcgtttgcga agttcctttg
    28201 atcgatatgc tccggtacca taaatttctg attgcgcggt attggatacc ggagtatggc
    28261 tcttcggaaa atgaggaaca gttcaggtgg ctgttgcgtt attcgccata tcacaatatc
    28321 aggcgcggcg taaatgtgcc cacgatgctt gttacggcgg gagccaatga cagccgtgta
    28381 gatccgatga atgcaaaaaa atttgttgcc gcgttgcaaa acaatccagg gcagatcagc
    28441 ccggtcattc tgcatatgga ttataacagc ggccatggat ccgggcaaag cacaagccag
    28501 acgatcgaca actggaattt catttttgaa tttatcatga accagttggg catgtaacta
    28561 ttccgatgga cctgtcgcta aaaaggatct ttccctggtt tttactgacg ggcatcgtag
    28621 ttaacggtac cgggttgctc acacctatcc ttgaacccga tggcgcgttg tacgcaggca
    28681 tcgccaaacg aattgtttta accaacgact ggataaactt gtacgccaat gggcaggact
    28741 ggcttgataa gccgcatttt cccttttgga tcactgccct gagttataca attttcggca
    28801 ttaactcctt cgcatataag ttcccggcat tcttgttctg gttgatcggg attcgtttca
    28861 cttatttggt ggcaaagaaa atctataacg aaaacgttgc gcgcatttcc gtagccatat
    28921 atgtaattgc gctgcatgga gtgatctcca actttgatgt acgtgccgaa ccttatctga
    28981 cgacattgac catcggcggc atttattaca catatcgctt gtataaaaaa tttacctgga
    29041 caaatctgtt tgcgagtgct gtatttgccg cgtgcgccgt catgaccaaa ggcattttca
    29101 tattgctaac ggttgccgga ggattgatcg tttattggat cattacgagg cagtggcggc
    29161 agtttcgcag cgcgcgctgg tggatactag gtttgctgat attaattttt ataacgcctg
    29221 agttgtattg cctgtacgtt caatttgatc tgcatcctga gaaagttgta tatggatgca
    29281 ctggcgtgtc aggccttcgg ttttttttct gggacagcca gtttggaaga ttttttaata
    29341 cgggcccgat ccaagggaaa ggcgacccgt cttttttcct ccatacctta ttgtgggcat
    29401 ttctgccatg gagtctattg ttctattatg cttttatacg actgctgcgc aaaaagaccc
    29461 gcgtgaaaaa tcctgcgcag tggattgttt acggaagtgc cgggttgagt tttttattat
    29521 tctctttatc aagatttcaa ctgccgcact acataattat tttttttccg caattaagta
    29581 tgatggtggc tgatgagctc gcttccacgg aaaaggctcg cgatcaaaac acgttactca
    29641 ccgttcaaaa gatactggtg ctgcttgcag ttcttgctgt tgctgtcgcg agtttttatg
    29701 gacgattgcc acacgggtat atagcttcag gcgttgcact ggcagtgatg atcataacct
    29761 tcattcgaag gaaacgacgc ttcatgattg acatgctgct attatcatat gcatttgcta
    29821 tagcagtttg cctctttctc aatcttgtgt tttatccttt gatcttacaa tacgaagcag
    29881 gaatgtatgc agcaaaatgg ctcaatcaaa acaatta
//
LOCUS       DASQJI010000338         2475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1112489,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000338 DASQJI010000000
VERSION     DASQJI010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112489"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VEV83_09460"
     CDS             complement(<1..258)
                     /locus_tag="VEV83_09460"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45384.1"
                     /translation="MEMLRKGQQCPRSSSSVRSRLGFYAVVDCNSFYCSAERVFRPEL
                     RERPVVVLSNNDGCIVSRTDEAKRLGIEMAGPYFKARPLIEE"
     gene            complement(275..940)
                     /locus_tag="VEV83_09465"
     CDS             complement(275..940)
                     /locus_tag="VEV83_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HYK45385.1"
                     /translation="MEDFTTTGQEEPQMPEAFGETFKNKLLANQYLLVMQPHEELWNR
                     IMNVKKEFAEKFDAPIATWTKPHIPLVTFEQFEMAEERIINRLKSIAMSLPAFKVELK
                     NFGSFPSHTIYINITSKISVVSTVKAVRQAQALMKINNDNKPYFITEPHLTICRKLLP
                     WQFEKAWAEYKDKTFAGRFIADKIRLLKRRAGEKRYVTAALFALENLPVVTQQGNLFG
                     RTL"
     gene            complement(947..1558)
                     /locus_tag="VEV83_09470"
     CDS             complement(947..1558)
                     /locus_tag="VEV83_09470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45386.1"
                     /translation="MEQALTSSAVIGFPLSQRFEYSLVAPCKDEIFLKIREEQQKFLL
                     DYKVQRSKTPVPNFTIANFLASEEMEETVIRWLRRIISEQRCFSVMLNNYGGVPSHCI
                     YARVQDNSPFKRLTKALHVIDQYVRSNGCPPAKLISNPNIAIAGKLSQEIFEKAMRDY
                     SRKTFYALFVVNELHLLKRKTEYDEYRQVSVFKLSQQYPESFN"
     gene            1656..2165
                     /gene="umuD"
                     /locus_tag="VEV83_09475"
     CDS             1656..2165
                     /gene="umuD"
                     /locus_tag="VEV83_09475"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF007621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HYK45387.1"
                     /translation="MEGELMDNAAYGGSKHFSQHQVPHANANGFGAAADDYMERGIDL
                     NEQLIINKPATYFFRMNSDAMINAGIFSEDVLIVDRSLKATNGKIIVAIVNGDLVVRR
                     LQVSFNHASLVAENNRYGNIEMEEFNDSTLWGVVTCVIHVYEKHLFVNKKASQLNQKD
                     KYGRQQKFY"
     gene            2237..>2475
                     /locus_tag="VEV83_09480"
     CDS             2237..>2475
                     /locus_tag="VEV83_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45388.1"
                     /translation="MKNLDHNPNAKPMPANKDDVIQYLQGRGAQINTKNRFLINERTK
                     EHIEAIDEWTEENAETVYLIENAKSIVNKVESPDVG"
BASE COUNT          711 a          546 c          510 g          708 t
ORIGIN      
        1 ctcttctatc aaaggcctgg ctttgaaata cgggcctgcc atttcaattc ctaatctttt
       61 tgcttcatcc gtgcgactga cgatgcaacc gtcgttattg cttaacacta cgaccggtct
      121 ttccctgagc tccggcctga atacgcgttc tgcagagcaa taaaaactat tgcaatcgac
      181 cactgcataa aatccgagcc ggctccgcac gctcgaggag gacctgggac actgttgacc
      241 ttttctaagc atttccattt tcaagatggg attctcacaa tgtgcgaccg aataaatttc
      301 cctgctgcgt aaccactggc aagttttcca gcgcaaagag agcggctgtt acatatcgtt
      361 tttcgccagc ccgtcgtttc aacaacctga tcttatctgc aataaatctt cctgcgaatg
      421 ttttgtcctt atactccgcc catgcttttt caaattgcca tggtaaaagc tttctgcata
      481 tggttaaatg cggctccgta ataaaatacg gtttgttatc attgtttatt ttcatcaatg
      541 cctgcgcctg tcttactgct tttactgtgc ttacaacaga gatcttactc gttatgttta
      601 tgtagatcgt gtgcgacgga aagctgccga agtttttaag ctcaacctta aaagccggca
      661 gactcatagc aatacttttt aaccggttga tgatgcgctc ttctgccatt tcaaactgct
      721 cgaatgtaac gagaggaata tgcggctttg tccacgtggc gataggcgca tcaaatttct
      781 ctgcaaactc tttctttaca ttcatgatgc gattccataa ttcttcatgc ggttgcatca
      841 ccaaaaggta ttggttcgct aataatttat ttttaaaggt ttcaccgaat gcctctggca
      901 tctggggctc ctcctgaccg gttgttgtaa aatcttccat agatttctaa ttaaatgatt
      961 ccggatattg ttgggataat ttgaaaacgc tcacttgccg gtattcatcg tattcggttt
     1021 ttcgttttag caggtgaagc tcattcacca caaataatgc ataaaatgtt tttcgtgaat
     1081 aatcgcgcat cgccttctca aagatttctt gcgacaattt gccggcaatg gcaatgtttg
     1141 gattcgatat cagcttcgct ggcggacatc cattacttct cacatactga tcaattacat
     1201 gcagcgcctt ggttaatcgt ttgaacgggc tgttatcctg caccctcgcg tatatgcagt
     1261 gcgacggcac gccgccataa ttattcagca tcacactaaa acagcgttgt tcgctgatga
     1321 tccttcgcaa ccagcgaata accgtttcct ccatctcttc gcttgcaagg aaattcgcga
     1381 tagtgaaatt tggtaccggt gttttggaac gttgaacctt gtagtcgaga agaaattttt
     1441 gttgctcttc ccttatttta agaaagatct catccttgca aggggccacg agcgagtatt
     1501 caaaacgttg cgataaagga aagccgatca cggcagaaga tgttaacgcc tgttccatat
     1561 acaaaacgag tgaaaaaaaa ttacttacta aaacgctaag ataaatattt tagtttagtt
     1621 ttactaaatt atttagctaa aaaatatttt tgtatatgga aggggaacta atggacaacg
     1681 ccgcttatgg cgggtcaaaa catttttcgc aacaccaggt gcctcatgcc aacgccaacg
     1741 gatttggcgc cgcagccgac gactacatgg aacgtggcat tgatctgaat gaacaactca
     1801 tcatcaacaa gcctgcgact tacttttttc gcatgaatag cgatgccatg ataaacgccg
     1861 gcatcttcag cgaagatgtt ttgatcgttg accgcagcct gaaagcgacg aatggaaaaa
     1921 taatagtagc gatcgtgaat ggcgatctcg tggtgcgtcg actacaggta agtttcaatc
     1981 atgcgagcct cgtcgccgaa aataatcgtt acggaaatat tgaaatggaa gaattcaatg
     2041 actccacatt atggggagtg gtaacgtgcg tgatacacgt ttacgagaag catctttttg
     2101 tgaataagaa agcgagccag ctaaatcaaa aggataaata cggcaggcag cagaagtttt
     2161 attaaacaat acttcattca ccctgttgct tatcttttta aaacacctaa aattcctaca
     2221 aggataggag gtaaccatga aaaacctgga tcataatcca aatgcgaaac caatgcctgc
     2281 aaacaaagat gatgtcattc agtatttgca gggccgcggt gcgcaaataa atacaaagaa
     2341 ccgtttctta attaatgaaa ggacgaaaga acatatcgaa gcaatagatg aatggacgga
     2401 agaaaatgca gaaacggttt acctcatcga aaatgcaaaa agcatagtca acaaagtgga
     2461 aagccctgat gtcgg
//
LOCUS       DASQJI010000339         2244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1727758,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000339 DASQJI010000000
VERSION     DASQJI010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1727758"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..807
                     /locus_tag="VEV83_09485"
     CDS             388..807
                     /locus_tag="VEV83_09485"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK45389.1"
                     /translation="MKYTAFCCLTFMFCAQAFCQTDEKGIVLGIERSAADAFTKHNVV
                     FLTAAYADNAQLTSATGSVITKQQLVQSVEKMTSYALSEMQVRLEGNVAIVTGLATIS
                     GKDDNGNYLNKNRFTDVLLKTKGQWQIIASQATPVGQ"
     gene            913..1932
                     /gene="obgE"
                     /locus_tag="VEV83_09490"
     CDS             913..1932
                     /gene="obgE"
                     /locus_tag="VEV83_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HYK45390.1"
                     /translation="MERSNFIDYIRIFCRSGNGGPGSRHYMRTKFNPRAGPDGGDGGR
                     GGHIILRGNKQLWTLLHLRYYKNVIAENGQPGDKNNRTGADGKDIVIEVPLGTIAKDE
                     ATGNKEAEILDDGQEVIWVRGGKGGLGNTNFATATNQAPEYAQPGEAGVEEWKTLELK
                     VLADVGLVGFPNAGKSTLLSVLTAAKPKIADYAFTTLTPQLGIVAYRDDLSFCMADLP
                     GIIEGASEGKGLGHRFLRHIERNAVLLFMIPADSKDVKEEFDILLHELSEYNPEMLQK
                     DFVIAISKSDMLDRELRAEIEKDLPADIPHVFISSIANQGLNELKDTLWKALGQNHLK
                     SAPNK"
BASE COUNT          670 a          486 c          524 g          564 t
ORIGIN      
        1 tgcgcaatta ccgaagcaat cccattacct tgcatcgtca gcaataaatt cgttatgact
       61 actacttatc accgcgcctg gcttaagtca agcagtttag cgcttgctgg tcgcacatgg
      121 caccaagcct gttagcgttc aataaaaaaa gaaattcgat tctggaaaag ccatcttgct
      181 caacagcaac gaaaatgcgt atggatcatc gccgctgcta tacgaagcga tgtgctcgtg
      241 atcgtttgtt ccgttttcgt ggagggccat gcggaatcaa attccgaatg ttggagtgtc
      301 gaacgaaccg tgcagtatga aaaattactc accggttaca acaacaatta tcttcgaccg
      361 ttatttttac acaaaaaatc tgaacttatg aaatacaccg cgttttgctg tttgactttt
      421 atgttttgtg cgcaggcatt ctgccaaacc gatgagaaag gaattgtttt aggcattgaa
      481 agaagcgctg ccgatgcttt tacaaaacac aatgtggttt ttctgactgc cgcatacgcc
      541 gataacgcac agttaacttc agcgacaggc agcgtaataa ccaaacagca attggtacaa
      601 tcggtggaaa aaatgaccag ttacgcgtta tccgagatgc aggtgcgcct ggaaggcaac
      661 gttgctatcg ttaccggcct cgcgacgatt tccggaaaag acgacaacgg caattattta
      721 aataagaatc gctttacgga tgtgctgttg aaaacaaaag gacaatggca aataatagcg
      781 agccaggcaa cgcccgtcgg tcaataaaaa attcttccgt tcaattttaa tcttaagcca
      841 ttcttttgaa cggcctgttt gttttctatt ccctgccggt ttttataatc aaggatttag
      901 ctttgccgtt gaatggagag aagcaacttc atagattata taaggatatt ctgtagaagt
      961 ggcaatggcg gccccggcag caggcattac atgcgcacca agttcaatcc aagggctggt
     1021 ccggacggtg gagacggcgg aagaggcgga cacattattc ttcgtggcaa taaacagctg
     1081 tggacgttat tgcaccttcg ctattataaa aatgtgatcg ctgaaaatgg ccagccgggc
     1141 gacaagaata atcgcaccgg tgcggacgga aaagacattg ttattgaagt gccgctcggc
     1201 accattgcca aagacgaagc aacgggaaat aaggaggccg agatactgga tgacggacag
     1261 gaagtgattt gggttcgcgg aggaaaaggc ggattaggaa atacaaattt tgcgaccgct
     1321 accaaccagg cgcccgaata tgcacaaccg ggtgaagctg gcgtagaaga atggaagacc
     1381 cttgaattga aggtgctggc tgacgtaggc cttgtaggct ttccaaatgc aggaaaatcc
     1441 actctgcttt ccgtgctaac ggccgccaaa cctaaaatcg cggattatgc gtttaccaca
     1501 ctaacgccac agcttgggat cgtggcatat cgggacgatc tttctttttg tatggctgat
     1561 ctgcccggta taatagaagg agcgtccgaa ggcaaaggat taggacacag gtttcttcgg
     1621 cacatcgaac gcaatgcggt ccttttattc atgatacccg ccgacagtaa agacgttaag
     1681 gaggagtttg acatcctgct acatgaactg agtgaatata accctgaaat gctgcaaaaa
     1741 gatttcgtga tcgcgatcag caaaagcgat atgctcgaca gggagctaag agcggagatt
     1801 gaaaaagatc tcccagcgga cataccccac gtgtttatct catctattgc aaaccaaggg
     1861 cttaatgaac taaaagacac actttggaaa gcgctgggcc agaatcactt gaaatctgca
     1921 ccaaacaaat agattatcgg gaacgggtta cctttcatcg tccgtggtat caatgtgtac
     1981 caaatacaca ataacttaaa gctttaaagg attgagtttg aaaatatgtt gcttgcctta
     2041 atgattgttg gcctgcggtt gcctgttgat gaacaataga atttattgga aaaaacaaaa
     2101 aaaaacaatt atgaaacagg cattattaag attttcagga aaaaaattca tctcagcagc
     2161 tatcctatcg gcatctcttc tattaacctc ctccggcggt tttgcagcca ctcattcttc
     2221 caatattgaa atcctctcgg gtga
//
LOCUS       DASQJI010000340         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_346549,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000340 DASQJI010000000
VERSION     DASQJI010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346549"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..>2170)
                     /locus_tag="VEV83_09495"
     CDS             complement(315..>2170)
                     /locus_tag="VEV83_09495"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45391.1"
                     /translation="AQSANTSLSNLVSPTAVNIDLLPNKDNKRDLGSSGKSWKDIHLD
                     GSVYVGGSRFLSANTGTGTGNTTVGADAFINNTTGYSNVAVGNSALRSNTMGFGMVAV
                     GDSALFSQAVNSNGYYNNTAVGIKAMYSNTTGWENTATGEYALYTNTTGALNTAIGGT
                     SLYSNTTGSANTATGFWTLFYNSTGTGNTANGNAALFDNSTGSFNTAIGEYALSNNIS
                     GSTNTAVGFLAMDQHTSGYSNVAVGARSLIYSNESNLVAVGDSALYWNGFNVPAGAGL
                     VAVGSKALFNNLSGSSNSAFGYQSLYKGTTGSYNVAAGTYAGDNLTDGSNNTFLGYNA
                     NSGTGGHIINGMALGYQASVTSNNHVVIGNSSVTSIGGFVNWSNLSDGRIKKNIKQNV
                     PGIEFINKLQPITYNLDLEAADKIIDLPQRKAKDGKTIQPSNFEADARKAKEQIVYTG
                     FIAQDVEKAAKSLNYDFSGVDKPDNANTLYGLRYSDFVVPLVKAVQELSAKNDDLQKQ
                     IDELKQMIVSNQSSANGQLSTVIVSASLSQNIPNPFNHITTINYTLPQQFSSAKIVVT
                     DKSGKVLKEASLSNSKGSIQLTASTLSSGTYQYSLYVDGRLIDTKQLVVAK"
BASE COUNT          592 a          466 c          446 g          666 t
ORIGIN      
        1 ttttgtcgtt tctaaatgta aagccttaat atgagtttag gaaaaaaatt aaatagaacg
       61 gtcccgttgt gattcgtcgt gcacttcgtg tccctgaatt tattttggag cacaacgggc
      121 acgaagaaga cacgatgaac acaaagtgtg agatgaaaaa atatttgtct cgttcaaatc
      181 ttagtgtact tcgcggttcg tggtgcactt cgtgctcctg gattttttat agagcacaat
      241 gagcacgaaa aaacataaat gccaagaaat tgttctcccg tcataccaac ctaaagaggc
      301 atctgcaacg ctttttattt cgccacaacc aattgttttg tgtcgatcaa tcttccatca
      361 acatataacg aatattgata agtgcccgaa gaaagcgttg atgcggtaag ttgaatagag
      421 cctttgctgt ttgacaggct ggcttctttc aaaaccttgc cgcttttgtc ggtgacaact
      481 attttggccg acgaaaattg ctgcggcaat gtgtagttaa tagttgttat atgattgaat
      541 ggatttggaa tgttttgtga taacgatgca gaaacaataa cagttgacag ttgaccgttg
      601 gcagatgact gatttgaaac aatcatttgt tttaattcat caatttgttt ttgtaaatca
      661 tcattcttcg cagacaactc ctgcactgct tttacaagcg gcacaacaaa atcgctgtaa
      721 cgcaagccat atagtgtatt cgcattatcc ggtttatcaa ctccactaaa atcatagttc
      781 aaacttttgg cagctttctc tacatcctgt gcaataaatc ctgtataaac aatctgttct
      841 tttgctttcc gtgcgtctgc ttcaaagttc gaaggctgga ttgtttttcc atctttagct
      901 tttctttgcg gcagatcaat tattttatct gcagcctcca gatccaaatt gtaagtgatg
      961 ggctgaagct tgttaatgaa ttcaataccg ggtacatttt gtttgatgtt cttttttatt
     1021 ctgccatcag agagattact ccaattaaca aaaccaccaa tgcttgtaac agatgaattt
     1081 ccgatcacaa catgattgtt acttgtaacg gatgcctggt agcctaatgc cattccgtta
     1141 ataatatgcc cgccggtacc ggagttcgcg ttatagccca aaaatgtatt atttgagccg
     1201 tctgttaaat tatctcctgc ataggtacct gcagcaacgt tataagaacc cgttgtgcct
     1261 ttatataatg actgataacc aaaagctgaa tttgaactgc ctgataaatt attgaaaagt
     1321 gctttggaac caacagcaac aaggcctgct ccggcgggga cgttgaagcc gttccagtat
     1381 aaagcggaat cccctactgc cactaaattg ctttcattgc tataaattaa tgaccgggcc
     1441 cccacggcaa catttgaata accggaagtg tgttggtcca tggcgaggaa gccaactgcc
     1501 gtgttggttg agccggaaat gttattagac aacgcgtatt cgccaatagc ggtgttaaac
     1561 gaacccgtac tattatcaaa aagtgcagcg tttccattag ctgtattgcc ggttcccgta
     1621 ctgttgtaaa aaagtgtcca gaacccggtt gctgtgtttg cagaacccgt tgtatttgag
     1681 taaaggctcg tgccgccgat cgctgtgttc aaagcaccgg tggtattggt ataaagtgcg
     1741 tactctcctg ttgccgtatt ttcccaaccg gtagtattag aatacatagc cttaattcct
     1801 actgcagtat tattatagta accattgctg ttcactgctt gactaaacaa ggcagaatct
     1861 ccaactgcca ccattccaaa acccatcgtg ttacttcgta aagcagagtt cccaacggcc
     1921 acattgctat agcccgtcgt attattgatg aatgcgtcgg cgccaacggt tgtattgcca
     1981 gttcccgttc ctgtatttgc ggacaagaac ctgcttccgc cgacatacac tgaaccatcg
     2041 aggtggatgt ctttccatga cttacccgat gaacccaggt cgcgcttatt atctttatta
     2101 ggcagcaggt caatatttac tgcagtgggt gaaacaagat tggataaact tgtgtttgca
     2161 ctttgtgcac
//
LOCUS       DASQJI010000341        12672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1113034,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000341 DASQJI010000000
VERSION     DASQJI010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12672
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113034"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..2471)
                     /gene="pbpC"
                     /locus_tag="VEV83_09500"
     CDS             complement(27..2471)
                     /gene="pbpC"
                     /locus_tag="VEV83_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012787841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HYK45392.1"
                     /translation="MLRGAVKNYFHKLSLQIKIAGGIVLMLLACFFFCFPSSLFNAAT
                     SYVIEDKDKDLLSASIAEDGQWRFPYDRDVPEKFSTCITTFEDKRFWYHPGVDPVAIT
                     RALWQNIQGRSVVSGGSTLTMQVMRLSRGPKSRNVFNKLLETILAVRLECTHDKKSIL
                     ALYASNAPFGSNVVGLDAASWRYFGRGPNELSWGETAALAVLPNAPSLVHPGKNQNEL
                     LRKRNFLLDKLVASKLIDSTTCHLAKLEPLPGEPRALPQLAPHLLDRFKRDLASAKKN
                     GDNVSTGTRTTINMQLQMQVSNIINARHHDLMANQINNAAAMVVEVETGNILSYIGNI
                     YEPQDSSLESHVDVLASKRSPGSTLKPLLYASLLSDGRMLPQQLVPDIPTQINGYAPE
                     NFDLGYDGAVPANRALARSLNIPAVKMLQQYRYQRFYTVLQQCGFTTLNHSSDFYGMS
                     LILGGCEISPYELCGVYSSMARMYLHQKNNDGKWNADDWFMPKYSDELPATRHEREAE
                     LQTSNLKPQTELFDYTSLWHTFNAMNEVMRPGEEGLWNMFQSAERIAWKTGTSFGFRD
                     GWAVGFTPKYCVLVWVGNTTGVGRPDLTGINTAAPIMFDIFRALPLSKWFSPPQYDFM
                     YLPVCHQSGFKAGPYCTNVDTMLVSVHAQKAPVCPYHRIIHLDHTGTYRVTDNCESPS
                     NMVHQAWFVLPPTMEFYYKQHHADYRSLPPFAAGCVNETIAAMEIIYPQEGAKIFVPK
                     EITGEKGRTIFSVTTRNANSKLFWHLDDEYIGITENFHQMAVNPAPGKHTLTVVDENG
                     ESVTRNFEIVEKGENE"
     gene            complement(2522..2779)
                     /locus_tag="VEV83_09505"
     CDS             complement(2522..2779)
                     /locus_tag="VEV83_09505"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HYK45393.1"
                     /translation="MHIRAFVNGVLVGILLGVLFAPESGEETRRKISRRAQGLKDTYD
                     DLAENVSDTYNRVKNKAGEVMNQAKNEYVDTESEGDSLYQA"
     gene            complement(3151..3702)
                     /locus_tag="VEV83_09510"
     CDS             complement(3151..3702)
                     /locus_tag="VEV83_09510"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK45394.1"
                     /translation="MKWVVYLIALITSTIDLRAQPVSVENIIKQTCEEAGRENKNAFI
                     IFHASWCVWCHRLDSSINDPSCAKFFSDHFVIEHVTVFETSAMEKLNNPGAEKFLTDH
                     HAHDQGIPAWFIFDKDGNLLADSQKRPAGAGFDTEGSNIGCPANGQEVGYFIEILKKI
                     APLSAEEEQSIRSRFLKNNPHPQ"
     gene            complement(3829..5022)
                     /locus_tag="VEV83_09515"
     CDS             complement(3829..5022)
                     /locus_tag="VEV83_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HYK45395.1"
                     /translation="MNHTLSHNESIPSSKKKIIVLGSGPNRIGQGIEFDYCCVHGLLA
                     IKECGYESIMVNCNPETVSTDFDMADKLYFEPVYWEHLWEIIELEKPDGVIVQLGGQT
                     ALKLAKKLNEKGIRIVGTSFDDMDIAEDRGRFSDLLKELEIPYPEYGTAFTADEAIEV
                     AKRVGFPVLVRPSYVLGGQRMRIVINDDELEKAVVSLLKHIPNNKILIDHFLDRCQEA
                     EIDAIFDGETFHVMGVMEHIEPAGIHSGDSNAVLPAFNLTPLVVTTMEYYAEKIGRAL
                     NILGLINIQFAIKDGKVYVIEANPRASRTTPFIAKAYQIPYLNIATKVMLGQVKLKDL
                     NFDKKLEGFAIKEPVFSFNKFPNVNKELGPEMKSTGEAIRFIKDLRDPYFRQLYREKS
                     MYLSK"
     gene            5093..5548
                     /locus_tag="VEV83_09520"
     CDS             5093..5548
                     /locus_tag="VEV83_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HYK45396.1"
                     /translation="MGKKSAGILLYRLQNKKMEVMLVHPGGPFWAKKDIGVWSIPKGE
                     FSDDEDALVAAQREFEEELGRKIIVKDFIELSPVKAKSNKIVYAFAVEQDFDTANIAS
                     NLCWIDWPPRSGKRMQVPEVDKAAWFDLETAREKIIGYQLPLIDELTKK"
     gene            complement(5686..6117)
                     /locus_tag="VEV83_09525"
     CDS             complement(5686..6117)
                     /locus_tag="VEV83_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45397.1"
                     /translation="MKQLSIFLSMVLFLGSNTLKAQQTAVITGNEPGWYKIAEKVVDF
                     KADRDQFLIEGADKFRAIQLRVTDAHVHFEDMNVVYDLPGTPETVKEDVELRRDFKPG
                     DHSRVIELQFPCLKLHQISFVYGTVPNARYEKAHVEVYGLK"
     gene            complement(6215..6955)
                     /locus_tag="VEV83_09530"
     CDS             complement(6215..6955)
                     /locus_tag="VEV83_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HYK45398.1"
                     /translation="MPEGPSIVILKEQVRQFKGKKILDVAGNSKIEYHQLHNKKVIDF
                     KSWGKHFLICCKGITLRVHFMLFGSYRINERKATPARLSLQFDNGELNLYACSVKLFT
                     EDPDELYDWSADVMNDAWDPSKARQKLKQIPETIVADALLNQNIFSGVGNIIKNEVLF
                     RIRVHPKTKVGDLPSKKLSELIKEARNYSFDFLEWKKAFVLKKHWLIHTKKICPRCNI
                     PVHKEHVGKTNRRTFFCENCQVLYQGII"
     gene            complement(7196..8434)
                     /locus_tag="VEV83_09535"
     CDS             complement(7196..8434)
                     /locus_tag="VEV83_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK45399.1"
                     /translation="MIHYNRFVLDNGLRVVVHEDTTTPMAVLNVLYDVGARDENPAKT
                     GFAHLFEHLMFGGSINIPDYDGPLQRAGGENNAYTTNDVTNYYCQLPAENIETAFWLE
                     SDRMLSLAFNKKSLDVQRKVVVEEFKEHYINKPYGDAWHKLRALAYKQHPYQWMTIGQ
                     SLSHIEQARLEDVKAFFFKHYRPANAIAVVAGNVTTEKAKQLAEKWFGPIEPGEKYIR
                     RLPQEPKQTSSRELTIKGDVPLDALYKTWHMPGRLDPGYHAADLITEILGGGGSSRLF
                     QNLVKEKRLFSNIECYHFGSLDPGLVAIEGKLVKGVKMDDAENAIEAELEKIKTQLVS
                     DDELQKVKNKTESIIAFEDVTVMSRANSLAFYELLGNPELINEELAKYNAVTAEEIRS
                     LSEQIFDTANSNVLRYYSNN"
     gene            complement(8622..9836)
                     /locus_tag="VEV83_09540"
     CDS             complement(8622..9836)
                     /locus_tag="VEV83_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HYK45400.1"
                     /translation="MVQHKGHICFSRMIMGLLFIFFSCGLSAQEEFVPPPAKLITTIP
                     FTLLTGGIVILHATLDDFKDTLNFVLDTGSGGISLDSVTCAYYNLPTVPSDRLVRGIA
                     GVKYVSFTHNHKLNLTGIVVDNLDFHINNYDILSSAYGMSIDGIIGYTFFRRYVVTLD
                     YDSQEMKVYTAGTYKYPRGGYLLKPQFSTLPMQMAGVRDNADITGKFYLDTGAGLCVL
                     MNDDFAKDSAIFKKKRKWYLTQAEGLGGKTDMQLSVVRDVKLGPYRFRNVPVYVFDDQ
                     YNVTSYPVLGGLIGNDILRRFNMVLNYPQQEIYIKPNKHFLDSFDYSYTGLGFYLIDG
                     AIRVTDIIKDSPAEKAGFQFGDVIIGVEANFSNNIQAYKVLLQSAKAKVRVIIMRNGQ
                     PKVLEIRVRSIL"
     gene            10029..11153
                     /gene="mqnC"
                     /locus_tag="VEV83_09545"
     CDS             10029..11153
                     /gene="mqnC"
                     /locus_tag="VEV83_09545"
                     /EC_number="1.21.98.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic dehypoxanthinyl futalosine synthase"
                     /protein_id="HYK45401.1"
                     /translation="MSVAALYEKALNFEFLSVEEGVYLFERAPLTELMYLANELRKKQ
                     VPHGKVTWQIDRNVNTTNVCIANCKFCNFYRVPGHPDAYITDMPTYRRKIEETLKFGG
                     DQLLLQGGHHPQLGLEFYTNLFREIKQEYPNIKLHSLGPPEVAHICKVSKKSHRDVLI
                     ALREAGLDSLPGAGAEILVDRVRRLISKGKCGADEWLDIMHEAHNLYITTSATMMFGH
                     VETIEERFIHLARIREVQDRKPKDAKGFLAFIPWTFQDVDTLLARIRGVHNLTTSEEY
                     IRMIAMSRIMLPNIKNIQASWLTVGKQTAQLCLHAGANDFGSIMIEENVVSAAGAPHR
                     FTYKTIQRAIRDAGFEPQLRNQQYEWRDIPDAIVEQVIDY"
     gene            11239..11736
                     /locus_tag="VEV83_09550"
     CDS             11239..11736
                     /locus_tag="VEV83_09550"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HYK45402.1"
                     /translation="MKGSRKAYWPAIFFMLVTITDVKSQTVTVYDSFPQLESRFHTSG
                     DTTLLVNFWATWCKPCIQELPYFQSLEKKFAGKKFKILLVSLDFRMQLETQVIPFVKN
                     KKIKPEVVLLADGDANSWIPHVDSQWDGAIPVTLMIVHGEKFFYGHGFDSQKQLESWI
                     GAHLN"
     gene            11767..12369
                     /locus_tag="VEV83_09555"
     CDS             11767..12369
                     /locus_tag="VEV83_09555"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK45403.1"
                     /translation="MKKIFLISFWSVVVMSTLSSFKLTSPAGYTIGDKAEDFALKNVD
                     GKTVSLKDYRNVKGYIVVFTCNHCPFAKAYEQRIIELHKKYAPLGYPVVAINPNNPEI
                     NPEDSYEMMQARAKEKAYPFAYLFDEKQQVYPKFGATRTPHVFLLTKDLSVAYIGAID
                     DNSQDPSAVENKYVENAITALEKGEQPNPAVTKAIGCAIK"
BASE COUNT         3420 a         2933 c         2778 g         3541 t
ORIGIN      
        1 aatcgccact cattactgat tactcattac tcattctctc ctttctccac gatctcaaaa
       61 tttctcgtaa cggattcgcc gttttcatca actactgtaa gcgtgtgttt ccccggtgcg
      121 gggttcactg ccatttggtg aaagttttct gttatgccga tatattcgtc gtcgaggtgc
      181 cagaataatt ttgaatttgc attgcgcgtg gtgacggaaa agatggttct tcctttctct
      241 cccgttatct cttttggtac aaagatcttc gcgccttcct gcggataaat tatttccatc
      301 gcagcgatcg tttcgttcac gcaacccgct gcaaaaggtg gcaaagagcg atagtcagca
      361 tggtgctgtt tgtaatagaa ctccatcgtg ggcggcaaaa caaaccatgc ctggtgaacc
      421 atgtttgaag gcgattcgca attgtccgtt acccggtacg tacctgtatg atcgaggtgt
      481 atgatgcgat ggtaagggca tacgggagct ttttgtgcgt gcactgaaac aagcattgta
      541 tctacattcg tgcaatacgg gcccgccttg aaacctgatt gatggcagac cggtaaatac
      601 ataaaatcat attgcggagg ggaaaaccat ttcgataacg gcaatgccct gaaaatgtca
      661 aacatgatcg gtgcagcggt gttgattccc gttagatcag gccgcccaac gcctgtcgta
      721 ttgcccaccc aaaccaacac gcaatatttc ggtgtaaaac cgacagccca tccatcgcga
      781 aagccaaagc ttgttcccgt tttccacgcg atacgttctg cagattgaaa catattccac
      841 aatccttctt cgcccgggcg catcacttcg ttcattgcat tgaatgtatg ccacaacgat
      901 gtgtaatcaa acaactctgt ttgaggtttg aggtttgacg tttgaagttc tgcttcgcgc
      961 tcatgcctcg tagctggaag ctcgtcgcta tatttcggca tgaaccaatc gtctgcattc
     1021 catttaccat cattattttt ttgatgcaaa tacattctcg ccatgctgct atagacaccg
     1081 cacaactcgt acggcgaaat ttcgcaaccg cccaggatca ggctcattcc gtaaaaatct
     1141 gaagagtggt tcaacgttgt gaaaccgcat tgttgtaaca ccgtataaaa tctttgatac
     1201 ctgtattgct gcaacatttt taccgccggt atattaaggc ttcttgcgag cgcacgatta
     1261 gccggaacgg cgccatcata tcccagatcg aaattctcag gcgcatatcc atttatctgc
     1321 gtcggaatat caggtacgag ctgttgcggc aacatacgtc catcgcttag caatgacgca
     1381 tacaataaag gctttagtgt actgcccgga cttcttttac ttgcaagtac atcaacatga
     1441 ctctcgagcg aagaatcctg cggttcataa atatttccga tatagctcaa aatatttccc
     1501 gtttctactt caaccaccat cgcagcagca ttgttgatct ggtttgccat taaatcgtgg
     1561 tgacgggcat taatgatatt actcacctgc atctgtagct gcatgttgat cgtggtacgt
     1621 gtgccggtgg aaacattgtc gccattcttt ttcgctgagg ccagatctct tttaaaccgg
     1681 tcgagcaaat gtggtgcaag ctgaggcagt gctcttggtt cgccgggaag cggttctaat
     1741 tttgcgaggt ggcaagttgt tgaatcgatc agcttcgatg cgactaattt gtcgagcaaa
     1801 aagtttcgct tgcgtaaaag ttcgttttga tttttgccgg gatgcaccag cgaaggcgca
     1861 ttaggcaaaa cggctagggc cgccgtttca ccccagctta gttcattcgg accgcggccg
     1921 aaatatctcc atgatgccgc atccagccca acgacgttac ttccaaacgg cgcgtttgaa
     1981 gcgtacaatg caaggatgct ttttttatca tgcgtgcatt cgagccgcac tgctaaaatc
     2041 gtttcaagca gcttattaaa aacattccgg ctttttgggc cacggcttag cctcatcacc
     2101 tgcatcgtca acgtactgcc gccgcttaca acgctacggc cctgtatgtt ttgccacagc
     2161 gcacgtgtaa tagcaaccgg atcgacaccg ggatggtacc agaatctttt atcctcaaat
     2221 gtggtaatgc atgtcgaaaa tttctcaggg acgtccctat catacgggaa gcgccactgt
     2281 ccatcttccg cgatggaggc gcttaggaga tctttgtcct tgtcttcgat cacatagctg
     2341 gtagcggcat tgaacaagga tgatggaaaa caaaagaaaa aacaggcgag taacatcaat
     2401 acgatgccgc ctgcaatttt tatctgaagt gaaagtttat ggaaatagtt tttaacagcg
     2461 ccccttagca cgcacacgaa tgtactgcat caagtatgaa aagcctgcta aaaaccggcg
     2521 gttatgcctg gtataaagaa tctccttcgc tttccgtatc tacgtattca ttctttgcct
     2581 ggttcataac ctcgcccgcc ttgtttttga cacggttgta agtgtcagaa acgttttcag
     2641 ccaggtcgtc atacgtgtct ttcagaccct gcgctctgcg cgagatcttc ctgcgcgttt
     2701 cctcgccgct ttctggtgca aataaaacgc cgagcaatat tccaacgagg acgccattga
     2761 caaaagctct aatgtgcata atttaaattt tagattgtta gtccctaaaa gcttgccaat
     2821 ttaaattatc ggcaaactac attgattgta ttcagattaa aggtataagg cgccaaagat
     2881 ctaaagctcg tcgggtggcg acgatactta aatcaaaatt aaaagccttc ctcccgcatc
     2941 ggaggccttt tactcatgta aatgaatatg gccgcgcttg ctccaataaa tgctaaacct
     3001 gcaataattg ataccatgac ttatcatttt gattacaact attactttga aaatttcgtg
     3061 ccgatgccgc ccggcagaga gttaaatagc gtgagaaaaa gggattggga aaacgcgtct
     3121 acaattgcgt tacgcgggtg atgtgtgctg ttattgggga tgcggattat tctttagaaa
     3181 tcttgatcgt attgattgct cttcttccgc ggacaacggc gctatttttt tgaggatctc
     3241 aataaagtaa cctacctcct gcccgtttgc cgggcagccg atgttcgatc cttccgtatc
     3301 gaaaccggca cccgcaggac gtttctgcga atccgctaac aagtttccat ctttatcaaa
     3361 gatgaaccac gccggaatgc cctgatcatg tgcgtgatga tcggtcagaa atttctctgc
     3421 gcccggatta tttaattttt ccatcgcgct ggtttcaaaa actgtgacgt gctcaatcac
     3481 aaaatgatcg ctgaaaaatt tcgcacacga agggtcattg atactgctgt ccaaccgatg
     3541 acaccatacg caccaggacg catgaaaaat gatgaatgcg tttttgtttt cacggccggc
     3601 ttcttcacat gtttgcttta tgatgttttc aacgcttacc ggttgagcgc gtagatcaat
     3661 agtagaggtt ataagtgcaa tgaggtaaac cacccacttc attcgttaac gattcaaacg
     3721 caaatttaaa acgtagtgat agttgggcga cgaggattac ttctttggcg gtaaacttta
     3781 gaaaaacgtt tgcagccggc acagcgaacg atcgacccgc agcaaaaatc acttgctcag
     3841 gtacatactc ttttccctat acagttgcct gaaataaggg tcgcggaggt cttttatgaa
     3901 acgaatagcc tcgccggtac tcttcatttc agggccgagc tctttgttta cgttgggaaa
     3961 tttgttgaag ctaaaaacgg gctctttgat cgcaaagccc tcgagcttct tatcgaagtt
     4021 gagatctttc aatttcacct ggccaagcat gacctttgtt gcgatattga gatacggaat
     4081 ttgatatgct ttcgcaatga agggcgttgt gcggctcgcc cggggattcg cttcaattac
     4141 gtatactttt ccgtctttga ttgcaaactg tatgttgatc aggcccagga tattcaatgc
     4201 acgcccaatt ttttctgcat aatattccat cgtagtcacc acaagcggag taagattaaa
     4261 cgcgggcagc accgcattgc tgtcgccact atgtatacct gcgggctcaa tgtgctccat
     4321 cactcccatc acatgaaacg tttcgccgtc gaagatcgca tcgatctcgg cttcctggca
     4381 acgatcgagg aaatgatcaa ttaatatctt gttattggga atgtgtttta ataaacttac
     4441 gaccgctttt tccaattcat catcgttgat cacgatgcgc attctttgtc cacccaaaac
     4501 gtaactcgga cgaaccagca ccgggaagcc aactcttttc gctacttcga tcgcttcgtc
     4561 ggctgtgaat gcggtgccat attcaggata aggaatttcc agttctttca aaagatcgct
     4621 gaaacggccg cggtcttccg caatgtccat atcatcaaaa gatgtcccaa caatcctgat
     4681 ccctttttca ttgagttttt tggcgagttt aagcgccgtt tgtccgccga gttgcacaat
     4741 tactccgtct ggtttttcga gctcaatgat ctcccacaag tgttcccagt aaaccggctc
     4801 aaaatagagc ttatccgcca tatcaaaatc cgtggagacg gtctccgggt tacaattgac
     4861 catgatcgat tcatagccac attctttaat ggcaagtaat ccatgtacgc aacaataatc
     4921 aaattcgatt ccctggccta tgcggttggg gccgctgcct aaaacgatta tttttttctt
     4981 tgaagacggg atggattcgt tgtgagaaag cgtatggttc attaaagtaa attgcgcaaa
     5041 agtaacgttc gcgatttagc ttgcaaaaac ttaaaaattc agactgaata agatgggtaa
     5101 aaaaagtgcc ggcattttgt tgtaccggct ccaaaataag aaaatggagg tgatgttggt
     5161 acacccaggt ggaccgtttt gggcgaagaa agacatcggc gtgtggtcga tcccgaaagg
     5221 cgaatttagc gacgatgaag atgctcttgt cgctgcgcaa cgggagtttg aagaagagct
     5281 cggtagaaag attatagtca aagactttat cgagctttca cctgtaaaag caaaaagcaa
     5341 caaaatagtt tatgcatttg ccgttgagca ggatttcgac acagcaaata ttgcaagtaa
     5401 tttatgctgg atagactggc cgccgcgctc cggcaaacgc atgcaggtgc ctgaagtgga
     5461 caaagccgca tggtttgatc tggaaacggc gagggaaaaa attattggct accagttgcc
     5521 actgattgat gagttgacga aaaaataacc tgacagagtt tcgctcttac ccatttcggt
     5581 tcgcgcaaac gttggaaagg cctgtacttt tcagtgccgc gatctaatca cgtaatcctt
     5641 cgacgccgca atttatgaag ccagcagggc agcactcaaa ccagattact tcaaaccata
     5701 aacttccaca tgtgcttttt cgtaacgcgc gtttggaaca gtgccgtaaa caaaagatat
     5761 ctggtgcaat ttcaaacatg gaaactgcaa ttcaattact ctgctgtggt ctcctggttt
     5821 gaaatctctt ctcagttcta catcttcttt aacagtttcg ggcgtaccgg gcagatcata
     5881 cactacattc atatcctcaa aatgaacgtg tgcatcagtg acccttaatt ggatagctct
     5941 gaatttatct gcaccttcta taaggaactg gtctcggtcc gctttaaaat caactacttt
     6001 ttctgcgatc ttataccaac ctggctcatt gcctgtgatg acagccgttt gttgcgcttt
     6061 aagtgtatta gatcctaaaa acaggaccat tgaaaggaaa atggaaagtt gtttcataat
     6121 catttttttg ggtctatgtt caaaatacgt accgtttgtg cgcatttatc gtgttatgct
     6181 tgccataggc atgttatggc ttgacagtca atgattaaat aattccctga tacaacacct
     6241 ggcagttctc gcaaaaaaac gttcgccggt tcgttttacc cacatgttct ttgtgaaccg
     6301 gaatgttaca gcgcgggcat attttttttg tatgaatgag ccaatgcttt tttaatacaa
     6361 aagctttttt ccattctaaa aaatcaaaac tatagttgcg cgcctcttta atgagctcgc
     6421 tcaatttttt tgatggcagg tcaccgactt tcgtttttgg atgaacgcgt attctgaaca
     6481 acacttcatt ctttattatg tttccaacac ctgaaaaaat attttggttc agcaatgcgt
     6541 cggcgacgat cgtttcgggg atctgtttta atttttgcct cgccttcgaa gggtcccatg
     6601 catcattcat cacatcagca ctccagtcgt atagttcgtc cggatcttca gtaaatagtt
     6661 tcacggaaca tgcataaaga tttagttcgc cgttatcgaa ttgtaaacta agtctcgcgg
     6721 gtgtcgcttt ccgttcgttt atgcgatagg acccgaacaa catgaaatgc acgcggagtg
     6781 tgattccttt gcagcaaatg agaaaatgtt tcccccagct cttgaagtca atcacctttt
     6841 tgttatgcag ttggtgatat tcgatcttcg aattgccggc aacatccagg atcttctttc
     6901 ccttaaactg gcgaacttgt tcttttaata tgacgattga agggccttcc ggcataagag
     6961 attaaaggtt gaatttttgc aaatgatgcg ccagactgtg tcgagtcgct ttttcgctgc
     7021 gtcgcgcatc cctcgtttgc gttgcagatc cctcgttagg aaccctttag tcgctgtaga
     7081 atgcgttttc actcgggaat acaatccgct gcattctcat ctctacataa ggaaagaccc
     7141 gccacccgac gtaagcagaa atctgcaacg cgaacaggca attgcaacgc ccttatcaat
     7201 tattcgaata ataacgaagc acattgctgt ttgcagtatc gaagatctgc tcgctcaaag
     7261 accgtatttc ttcagcggtt acggcgttgt attttgcgag ttcttcgttg atcagttccg
     7321 ggttccccag cagttcataa aaagcaaggc tgttagcacg gctcatcacg gtgacgtctt
     7381 caaacgctat tatactctcc gttttatttt ttactttctg caattcgtcg tcgctgacaa
     7441 gctgtgtttt gatcttttcc agttccgctt ctatcgcgtt ttccgcatcg tccatcttta
     7501 cgcccttaac aagtttccct tcaatcgcta ccaaaccggg gtcaagactg ccgaaatgat
     7561 agcattcgat attgctgaat agccgcttct ccttcacaag gttttgaaac aatcgcgacg
     7621 aaccgcctcc gcctaaaatt tctgtgatca ggtcagcggc atgataaccc ggatctagtc
     7681 ggccgggcat atgccaggtc ttgtacaatg cgtccagcgg aacgtcgcct tttatagtca
     7741 actcgcggga cgaagtttgt tttggctcct gcggtaacct gcgaatatat ttttctcccg
     7801 gttctatcgg accgaaccat ttttctgcaa gctgctttgc tttctctgtt gtaacatttc
     7861 ctgccacgac agcaattgcg ttcgccggac gataatgttt gaagaaaaat gcttttacat
     7921 cttcaaggcg cgcctgttca atatgactaa gggactggcc gatcgtcatc cactggtaag
     7981 ggtgttgctt gtaagccagt gcgcgcagtt tgtgccacgc gtcaccatag ggtttattga
     8041 tgtaatgttc tttaaattcc tcgacaacaa ccttgcgttg tacatccaaa cttttcttat
     8101 taaatgccag gctcagcatg cgatcgcttt caagccaaaa agcagtctca atattttctg
     8161 cgggtagttg acagtagtag ttcgtaacgt cgttggtcgt gtaagcgttg ttttccccgc
     8221 cggcgcgctg aagtggacca tcgtaatccg ggatgtttat actgcctcca aacatcaggt
     8281 gttcaaataa atgagcgaag ccggttttag cggggttctc atcgcgcgca cctacatcat
     8341 acaatacatt caaaaccgcc atcggtgttg tagtatcttc atgaacaact acgcgaagcc
     8401 cattgtcaag aacaaaacga ttataatgga tcatggtcga tttttacgga cggtgcaaga
     8461 tgcggaaaaa tttacgaatt aggatttggg agtttagatt taggaattag gaattagggt
     8521 ttagcactta ggcaacatca gagatccgag attcagacat cacagatcca agatcagaca
     8581 tcagatcaga gatcagagat cagagatccg acatcataca actacaaaat gcttctcacc
     8641 cgtatctcga gcactttcgg ctgaccgttg cgcatgatga tcacacgtac tttcgctttt
     8701 gcactttgaa ggagcacttt ataagcctgg atattgttgg aaaagttcgc ttcaacgccg
     8761 attataacat caccaaactg gaaaccggct ttttctgccg gcgaatcttt aataatatcc
     8821 gtaaccctga tggcgccgtc gatcaggtaa aagccaagcc cggtgtagga atagtcgaat
     8881 gaatcgagga aatgcttatt cggtttaata tagatctcct gctgcggata gttgagtacc
     8941 atgttgaacc tcctcagtat gtcgttgccg ataagtccac ccaaaaccgg ataagacgtt
     9001 acgttatact ggtcatcgaa aacatacaca ggcacattgc ggaagcgata cgggccaagc
     9061 tttacatctc taactactga aagttgcata tccgttttgc cacccaaccc ttctgcctgt
     9121 gttaaatacc atttcctttt tttcttaaag atcgcgctgt cttttgcgaa atcatcattc
     9181 attaaaacac acaaaccagc gccggtgtcg agataaaatt tcccggtaat atccgcattg
     9241 tctctaacgc ctgccatttg cataggcaac gtggaaaact gcggctttag taaataacca
     9301 ccccgcggat atttgtatgt accggcggtg tacactttca tttcctggct gtcatagtcg
     9361 agcgtaacta cataacgccg gaaaaaggtg taacctatta tgccatcgat cgacatgcca
     9421 taagcacttg ataaaatgtc ataattattt atgtggaaat ccaggttatc gacgacgatt
     9481 ccggttaaat tgagtttatg attatgcgtg aacgaaacat attttactcc ggcaattccc
     9541 ctgaccaaac ggtcgctggg tactgttggc aagttgtaat aggcacaggt aactgaatcg
     9601 agcgagatcc cgccgctgcc tgtgtcgagc acaaaattca gcgtgtcttt gaaatcgtcg
     9661 agcgttgcgt gcagaataac aatgccacct gtgagtaatg tgaaaggaat tgtggtaatg
     9721 agcttagcgg gtggtggaac aaattcttcc tgtgcagaaa gtccgcaact gaaaaaaatg
     9781 aaaagcaacc ccattatcat tcttgaaaaa caaatatggc ctttatgctg taccacgctt
     9841 aggaatttat tgtgctgaca tgaaattacg tttgtctgat tttgtgtcca aaccattaaa
     9901 ataactgtaa ggttggcggt attcctttca acacggtcct ccaagaagtt attgttcagt
     9961 aattttgccg ttaaccgttg gcacaatcga tgggcaggac gcaatgtttc tgaataaaaa
    10021 acttaagtat gagtgttgca gcattgtatg agaaagcgct aaactttgaa ttccttagcg
    10081 tggaagaagg tgtttacctt tttgaacggg cgccgcttac tgaattgatg tatctggcaa
    10141 atgagcttcg gaaaaaacag gtgccgcacg gaaaagtaac ctggcagatc gaccgcaacg
    10201 tgaatacgac gaatgtgtgc attgccaatt gcaagttctg caatttctat cgtgtgcccg
    10261 gtcatcccga tgcgtacatc accgacatgc caacctatcg ccgcaagatc gaagaaactt
    10321 taaaatttgg cggcgaccaa ttgctgctac agggcggaca tcacccacag ctcgggcttg
    10381 aattttatac gaatctcttt cgcgagatca agcaggaata tcctaacata aagctccatt
    10441 cactcggccc tcccgaagtt gcgcatatct gtaaggtttc aaaaaaatca catcgcgatg
    10501 tattgatagc gttacgagag gcagggcttg attcacttcc gggtgcggga gcagagatcc
    10561 tcgtggaccg ggtaagaaga ctcatcagta agggcaaatg cggtgccgat gaatggcttg
    10621 acatcatgca tgaagcacac aatctttata tcacgacaag tgcaacgatg atgtttgggc
    10681 acgtggaaac gatcgaagaa cggttcattc accttgcacg tatacgcgaa gtgcaagaca
    10741 gaaaaccaaa agatgcaaaa gggttcttgg cgttcattcc gtggacgttc caggatgttg
    10801 atacattgct cgcccgcata cgcggtgttc ataatcttac cacatccgaa gaatatatcc
    10861 gtatgatcgc gatgagccgc atcatgcttc ccaatattaa aaacatacag gcaagctggc
    10921 tcacagtagg aaaacaaact gcgcagcttt gcctgcatgc cggcgccaat gattttggaa
    10981 gcatcatgat cgaagaaaat gtagtcagcg ctgcaggtgc gccccatcgt tttacgtaca
    11041 aaacaatcca gcgcgcgatc cgcgacgcag gatttgaacc acaacttcgg aaccagcaat
    11101 atgaatggcg cgacatcccc gatgcgatcg tagagcaggt gattgattat tgaaagaggc
    11161 cgttaatctt tcgcaaagaa tcatcaactg aactgtacac gccgatgtat tttctaaatt
    11221 ggcggagaca cacgcaatat gaagggaagc agaaaagcat actggcccgc tatttttttc
    11281 atgctggtga ccatcactga cgtgaagtcg caaacagtca ccgtatacga ttctttcccg
    11341 caactcgaat cgcgttttca cacgtcaggc gatacaacgt tgcttgtgaa cttttgggca
    11401 acatggtgca aaccgtgcat tcaagaactt ccttatttcc agtcgctcga aaaaaaattc
    11461 gctggtaaga aattcaagat attactggtt agcctcgact tcagaatgca acttgaaaca
    11521 caggtgatac cattcgtcaa aaacaaaaaa ataaaaccgg aagttgtctt acttgcagac
    11581 ggcgatgcaa acagttggat accccatgta gacagccaat gggacggcgc gatcccggta
    11641 acattgatga tagtacacgg tgaaaaattt ttttatgggc atggattcga ctctcaaaaa
    11701 caactcgaaa gctggattgg cgcacatctt aattagattt tcttcgttga tttaaaaatg
    11761 agagctatga aaaaaatatt tctgatcagc ttctggtccg tggtggtgat gagtacgctg
    11821 agcagtttta aacttacgtc accggcgggt tatacgatcg gtgacaaagc cgaagatttc
    11881 gcgttgaaga atgtcgatgg gaaaacggtg tcgctaaaag attatcggaa tgtgaaagga
    11941 tatatcgtcg tcttcacatg caaccactgt cctttcgcaa aagcatatga acaaagaata
    12001 attgaattgc ataaaaagta tgcgccgctg ggatatcccg ttgttgcgat caatcctaat
    12061 aatcccgaaa tcaacccgga agacagttac gaaatgatgc aggcgcgagc aaaggagaaa
    12121 gcatatccgt tcgcttacct gttcgatgaa aagcagcaag tgtatccaaa attcggcgcg
    12181 acgcgtacgc cgcatgtatt tttgcttacg aaagatcttt ccgttgcata cattggcgcg
    12241 atcgacgaca attcccagga tccttcggcg gtggaaaaca agtacgttga aaatgctatc
    12301 accgcattgg aaaagggcga acagccaaat cctgcggtta caaaagcaat aggctgcgcg
    12361 ataaagtaga acgtgccgcg cgattgtttt ttaccatctc aatttttttg ccctctcttc
    12421 atatattcga atcttcgtgg ttcaaaaggt cagaaaccac aaagacgcca ggtcacaaag
    12481 cgtcaaaaag tatactgatc tcgtcgctca ctggatcatc aatttttgat gcctcaacac
    12541 aatcagtttc tcgtttgtca tttagaacga tcgctttaca ttgcgaaaat caaacacccg
    12601 ggcttaaaaa aaaacatcac atttgcgtga acactatctg cacatgaacc agtttaacga
    12661 agcctgcgat ta
//
LOCUS       DASQJI010000342        13201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_960476,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000342 DASQJI010000000
VERSION     DASQJI010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13201
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960476"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1528
                     /gene="bshC"
                     /locus_tag="VEV83_09560"
     CDS             <1..1528
                     /gene="bshC"
                     /locus_tag="VEV83_09560"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HYK45404.1"
                     /translation="ESAPQLQPFYNYKPDIEGVKSAIAGRKSFQHREILVSELRKQYQ
                     DLEVSDATSKNIQSLLDENTFTVTTAHQPNIFTGPLYAVYKIFHAIKLAQELNDAIPG
                     TRFVPIYFIGSEDADLAELNHISINARVYTWDTKQTGSVGRMKVDDELLRVISEMEGQ
                     LHIQSHGEEITQLFRRCYEKGSSIQQASLKLANALFGEYGLIALIPDNAGLKRLFQPV
                     IATELHDQFSHKAISSTIKALDEHYKVQASGREINLFYLIDDKRERIEAVDGRFEVKS
                     RGLQWNAAEILRELDEHPERFSPNVILRGVFQEAILPNVAFIGGGGELAYWLEFKEVF
                     RAAEVPYPVLLLRNSFLLIEKAWLKKIEALHLDPEFLFENEHNVMKRVLAANSKNKFA
                     LNGELSKFENLYTQIQNLTTNIDPTLNDHVAALKTRALKKLVELEKKMLRAEKKKFAT
                     QQQQVQKIKATLFPNNSLQERVENFSGFYARYGRDWLNTILQHSTAFQQQFGIITVDQ
                     "
     gene            1800..2498
                     /locus_tag="VEV83_09565"
     CDS             1800..2498
                     /locus_tag="VEV83_09565"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK45405.1"
                     /translation="MEKAKKYVLELISIKVLLVSILFIFCLFGFAYIADEAVFENENR
                     FDNSVFSFFASFSTPGLVSVMKVFTFFGSVQFLVPAYILLIGYFFMKKKYRYGTDIAI
                     IGITSSAMMFWLKDLFHRERPMLPIIQGLSTYSFPSGHALSSFILCSIFIFIIRNGHW
                     KSLYKWIVGILLLLFAITIGVSRIVLKVHYPTDVVASLCLGIAWVIFSLWLLKKINRK
                     YMIRKDLSAAKPPM"
     gene            complement(2508..3323)
                     /locus_tag="VEV83_09570"
     CDS             complement(2508..3323)
                     /locus_tag="VEV83_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45406.1"
                     /translation="MKELTICLLVLAGLCSCSTKKQSIDFVTLQASEFNSAPFDLPSG
                     QIPASKKHAHDSCMGFSFDANAVLIRTRDTFFIGSVVNRQSLAVIHRSNELGLTQKQL
                     ISQYNVISEPCYEKKVLNFPLRSTFGENFSLRLPGADESTNRKINEVLQTSVIDEIES
                     GPWVYIDMKDALKNILDTVKSHDGLRYKSAALDSANMVLTSLEAVTYLTFVIHTKDEI
                     SPSLQAVLKSEPFVPFPQATFTIQLFYTNSKEIKMAVNGFFPAAGQFMRVITK"
     gene            complement(3337..5064)
                     /locus_tag="VEV83_09575"
     CDS             complement(3337..5064)
                     /locus_tag="VEV83_09575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45407.1"
                     /translation="MKRPVIILTPLLLAVTSLALVSKNFDHRSVSSYSTRSSPVIGCA
                     PDAGETFYADDNGNFITILPGWGDHAYSITTENDSAQVYFNQGLTMYYGYHPREAIAS
                     FKQAAKFDSTCAMAYWGEALAMGPTYNGGYSYKMNKGVPAAIELMDHNAANCTEKEKD
                     LISAMKARYNLADTADTERKRLNKDYVEVLRPLVAKYPADLDVKALFVDAVMLVHPWD
                     FWNTDGTPKSWTPELVQCCKDILAKDPHHPAALHYYIHVTEASRTPEVALPSADSLKK
                     LFPGIAHMVHMSSHEYERIGYYAQGVEVNDEADESLGRYASLAQGLNLTLHSSHYYAV
                     YTYCALSGGMYKRSIEKGMALRNLVHPNYENTNDQYLYMFPLLAMVRMGKWQDIIADN
                     SSISSDWKYAGVLDDFAKGMAYAKTGNVAKAETFVHDLREKQKDSVLRARFIPHVSSP
                     YPCSVIAENILVANIAFRNKKYNEAFTAINNAIISEDSLVYAEPNSWMLPARQYLGAF
                     LLKLNKPAQAEKVYREDLVRNPGNGWSLLGLYQSLQAQEKTAELEKLKALFTNSFSQA
                     DSFPSTSAY"
     gene            complement(5143..5700)
                     /locus_tag="VEV83_09580"
     CDS             complement(5143..5700)
                     /locus_tag="VEV83_09580"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK45408.1"
                     /translation="MKKLFLFSSLLTLVLVFTTSFSSAQAITSDQIKAQMVSDWQRAK
                     AYTIEYLNTMPADKYSFQPVDSIKRSFAQQMLHLAGGNILLMSNATDAKPPAFFGYDL
                     EHGAGAQSKDSVMYYVTTSYDYCINAVQSSDVNKWGETTDIFGMKLTRYALMTKAFEH
                     QTHHRGQTTIYIRLQGIRPPQEKLF"
     gene            complement(5768..6760)
                     /locus_tag="VEV83_09585"
     CDS             complement(5768..6760)
                     /locus_tag="VEV83_09585"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK45409.1"
                     /translation="MTNVFVTGGSGFIGQHLVKKLKQNGAQVFVLARSRDAATSVSAL
                     GATPVMGDLLRPESLNKLHKFDTVFHLAGTLDHGPGPEAMLAINTGGTKNIVEYCKKI
                     GVKKLVYLSSLAVIADGSILTDIDEQHPMPKKNIGSYASSKAEAEKIVLSAADEDLAT
                     VIIRAPFVWGPGDNFSLPKLIESIKNKYFSWIDQGNYLFSTCHVYNLVAGLAAAASFG
                     KSKHVYYIQDGETLTIRQFLETLIETQGIKVPSRSTSRKTLKLICDLIELPWRLLPLR
                     SHNPTHLRETMVLMGQPFYITSRKAERELHYEPVISFDEGFSEMRKDGLLRALN"
     gene            complement(6879..8027)
                     /locus_tag="VEV83_09590"
     CDS             complement(6879..8027)
                     /locus_tag="VEV83_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45410.1"
                     /translation="MLGGTISLQRAARISVSAFFFITGFCFASWASRIPDVQHRLHLD
                     AAQLGSALFALPIGSMVSLPIAGYVVTKLGSRIVMFTGAFLYAALLCLLGTVSEKWEL
                     MTVLFFFGMSGNLMNISINTQAIGVESLYRRSIMASFHGLWSVAGFTGAAIGTLMVSQ
                     KVAPLFHFIIIACILAALALLMFPHSLRNEERNAGSRTGFVLPDKFLLKLGVIAFCCM
                     SCEGCMFDWSGIYFRDVVHAPMQLVPLGYTAFMAMMATGRFVGDQLVARIGVARLMIL
                     SGCLIVSGLLTAIVFPTIYTATLGFLLTGFGVSSIVPLAYGLAGRSKTMSAGMAIASV
                     STVGYLGFLFGPPIIGYIAKAASLRWSFALIALLASFMIFLAGKIKAK"
     gene            8268..10655
                     /locus_tag="VEV83_09595"
     CDS             8268..10655
                     /locus_tag="VEV83_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45411.1"
                     /translation="MIKNLLHVALRNFTRDKWYSLLNILGLTIGITFSVFLILYITDE
                     LSYDRYNEKADRIYRVASYVKEPDKDTMKWAFCPFPMGPALSADYPEVEEAVRLWDNG
                     KTLIKNGNLQFYEQKVFYADSNVFRVFTHQFIEGDPRTALIAPRSLVLTQSMAEKYFG
                     KQASYVGKTLQTASDDVYKVTAVVKDVPRNSHLIFNILVSRNSLPADFANNWGGFGFF
                     TYVLLKPNVNAAALEKKLLPIYDKYLASIFAQYNIKMRFGLQPVTSIHLHSDMTGEPE
                     ELGSMSYIYIFSAVAFFMLLIACINYMNLTTARSARRAKEIGIRKVTGSSKMQLILQF
                     LVESTLTAVFALLLSIGLIALLLPTFNMLSGKFISFSTLLQANTLLILLAIIVFVGIV
                     GGSYPAFYLSRFNPIHVLKGSLAKGSSNVTLRRALVVVQFSISMIMLICTWVVYGQLK
                     YLHSKDLGFNKDQVLNVNANSDQDVHSKILAFKNDMRNNPHVLSVSTSQGVPGSGINF
                     SLFSIETKNGFVDKGVDCYGVDEDYFKTLGMRIVKGRNFSGLPDTLHSIVVNENMVKE
                     YGWGDKAIGRKVKFPGDTSGNYLEVIGVVKDFNQKSLYNPITPLLLYYRPNSNGIQLK
                     LKAKDIDAGIASAEKTWKKYFPDLPFAYTFLDQDFNSQYAADEKRGKIFTAFSVLTIL
                     ITCLGLLGLIAFTTEQRQKEISIRKVMGANVAQIIPLITRNFIALVGLSCLIAFPVAW
                     YFMSNWLDIFPYNTGLHVTPFLLSAVVVLIITLLTVVFHTVKAAIANPVKALKVE"
     gene            10783..10980
                     /locus_tag="VEV83_09600"
     CDS             10783..10980
                     /locus_tag="VEV83_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45412.1"
                     /translation="MKNTKNKNRQPGSQAPNANYNPANRDFQRTEDDLDNVSKSEKDE
                     LQRRKDRTAKASTKPNKRRMS"
     gene            complement(11031..11393)
                     /locus_tag="VEV83_09605"
     CDS             complement(11031..11393)
                     /locus_tag="VEV83_09605"
                     /inference="COORDINATES: protein motif:HMM:NF023390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS/SEC14 domain-containing protein"
                     /protein_id="HYK45413.1"
                     /translation="MLQLIEDLPPHVVGVRAVNAVTEEDYKQVLIPALEALDKSIGRI
                     NLIIVLETNVSNYTVGAWANDLKAGFKYFNKWHRIAIVSDQKMVRKFTDAFNFIAPGE
                     YKGFSMAELSVAKQWVAA"
     gene            complement(11446..11736)
                     /locus_tag="VEV83_09610"
     CDS             complement(11446..11736)
                     /locus_tag="VEV83_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HYK45414.1"
                     /translation="MAKYGKKSQDKVEKSMHEMKEGKLKSGRSGKKVTSRKQAIAIGL
                     SEARKEGGKAPKKAASKKGAKKSAKKSAPKKTARKSSAKKTSGRKKSASKSK"
     gene            complement(11801..12562)
                     /locus_tag="VEV83_09615"
     CDS             complement(11801..12562)
                     /locus_tag="VEV83_09615"
                     /inference="COORDINATES: protein motif:HMM:NF039704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6252 family protein"
                     /protein_id="HYK45415.1"
                     /translation="MRRLLIFISPVIIFLACKKSDGGAEFASPRFEADIEGVHWKADS
                     VYAERVPPYGPVGYFAISAKRNDNSYLFLQTFNDTVSTQTFKEASAVVVSFQAKLAVP
                     DSNYINVSWVTLSEANTNRFEIEHSYDGMQFYYVGQVAAQGNSAKEHSYSFSEKPALT
                     DPFFTKVYYRLKLVDSDSTVAYSAIIIVRFGTPGLYIFPSGDFGFGYNGTITVTSVDR
                     QKNLLSGNFHFTYTDDSDHQRKKVENGVFENVPYQ"
     gene            12631..>13201
                     /locus_tag="VEV83_09620"
     CDS             12631..>13201
                     /locus_tag="VEV83_09620"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HYK45416.1"
                     /translation="MFQSKKNIITGRNPVTEALRQGNNIDKILLFKNASGESVNEIRR
                     LAKERQVPVQYVPNEKLNALTNTQHQGVIAFRSAIQYQDLQQVIDWINDKGEPALFLM
                     LDGITDVRNIGGIARSLVCCGAHALIIPEKGVGALNEDAVKSSAGALEQLQVCRVSSL
                     LKAVDDLHLNGIKIFSSEMHAKQRLHELDL"
BASE COUNT         3686 a         2949 c         2900 g         3666 t
ORIGIN      
        1 ggaaagcgcc ccacagcttc aaccatttta caattacaaa cctgatattg aaggcgtcaa
       61 atctgcgatc gcgggaagaa aaagttttca gcatcgtgaa atcctggtca gcgagttgag
      121 gaaacaatat caagacctgg aagtttctga tgccacttcc aaaaacattc aatcactcct
      181 cgacgagaat acattcaccg ttaccaccgc tcatcagccg aatattttta ctggcccgtt
      241 atacgcggta tacaagatct ttcacgcaat aaaactggcg caggaattaa acgacgcgat
      301 tccgggcaca cggttcgtcc cgatttattt tatcggcagt gaagacgcag accttgcgga
      361 gctaaaccat atcagcatca atgcacgggt ttatacgtgg gatacaaaac aaacaggctc
      421 agttggcagg atgaaagtgg atgatgaact gctgcgtgtg ataagcgaga tggagggaca
      481 gttgcatata caatcgcatg gtgaagagat aacgcagcta tttcgccgat gctatgaaaa
      541 aggatccagc atacagcagg cttcactgaa attggcgaat gcattatttg gtgaatatgg
      601 acttattgcc ttaatacccg ataatgctgg cttaaaaaga ttatttcagc ccgtgatcgc
      661 cacggaactg cacgatcaat tctcacataa ggccataagc tcaacaataa aggctcttga
      721 tgaacattac aaagtgcagg cctcaggcag ggagatcaat ttattttatt tgatagatga
      781 caaaagggaa aggatcgagg cggtagatgg aaggttcgag gtgaagagtc gcgggctgca
      841 atggaatgca gcagaaattc ttcgcgaact ggatgaacac ccggagcggt ttagtccaaa
      901 tgttatactg cgcggcgttt tccaggaagc cattctccca aatgttgcct ttataggtgg
      961 cggaggcgag ctggcatact ggctcgaatt taaagaggtg ttccgggcag cagaagttcc
     1021 ataccctgta cttcttttgc gaaattcatt tttgctgatc gaaaaagcat ggctgaagaa
     1081 gatcgaggcc ttgcatttag atccagaatt tctttttgaa aatgaacata acgtgatgaa
     1141 acgcgtatta gccgccaatt caaaaaacaa gtttgcgctg aatggagaat tgtcaaagtt
     1201 tgagaatttg tatacccaga tccagaacct tactactaat atcgacccta ccttgaatga
     1261 tcatgtggca gcgctgaaaa caagagcgct gaaaaaactg gtcgagctgg aaaagaaaat
     1321 gttgcgcgca gaaaaaaaga aatttgcaac acagcagcaa caggttcaaa aaataaaagc
     1381 cacccttttc ccgaacaaca gtttgcagga acgcgtcgaa aatttttccg gcttctatgc
     1441 ccgctatggc agagactggc tgaatacgat cctgcagcat tcgactgctt ttcagcagca
     1501 gtttgggata ataaccgtag atcaatagca acaacgctct cagcaaaatc tctcacagaa
     1561 agcacggatg tacacggatt cgtggtaaat aattgttgac gtttttgata aaaatatccc
     1621 tatgctcatt atacagaact tactgctgcc aagtaacatt ggttagcttg acaaagactg
     1681 gtatcgtttt cgcatcgttc aaattgtcga tcacgttggt ctgcctccgc cctatggacg
     1741 attcagcgtt accatccggt aaaatatgaa atacatttga acgtaaagtg ctcgcataaa
     1801 tggaaaaagc gaaaaaatac gtccttgaac ttatttcaat aaaagtgctc ctggtcagca
     1861 tcctcttcat cttttgcctg tttggcttcg cttacatagc cgatgaagct gtatttgaaa
     1921 acgaaaacag gtttgataac agcgtctttt ctttttttgc ttcattctcc acacccggtc
     1981 ttgtatccgt catgaaggtc ttcacttttt ttggctccgt tcaattcctt gtgcctgcgt
     2041 atatccttct gattggttat ttttttatga aaaagaagta ccggtatgga actgatattg
     2101 cgatcattgg tataacgagt tctgcaatga tgttctggct caaagacctg tttcaccgcg
     2161 aacggccgat gcttcctata atacagggat tgagcacgta cagtttcccg agcggacatg
     2221 cgctgtcttc atttatcctc tgcagtattt ttattttcat catccgcaac gggcattgga
     2281 aatcgcttta taaatggatc gttggtatcc tgcttttact tttcgcaatt acgatcggcg
     2341 taagcaggat cgtgctgaag gttcattatc ccaccgatgt cgtggcatcc ttgtgtcttg
     2401 gcatcgcctg ggtgatattt tcgctttggc tgctaaaaaa gatcaaccgg aagtatatga
     2461 tacgaaaaga tctttctgca gcgaagccac caatgtagct ttcattgtca tttcgtgatg
     2521 actctcatga actggccggc agcagggaag aaaccattta ctgccatttt gatctctttg
     2581 ctgttggtgt aaaaaagctg aatcgtaaat gttgcttggg gaaatggaac aaagggctcg
     2641 ctttttaaga ccgcctgcaa cgagggcgag atctcgtctt ttgtatgaat cacaaaagtc
     2701 aggtatgtaa cggcttcaag gcttgtaagc accatgtttg cactatcgag ggcagcgctt
     2761 ttgtagcgca ggccatcatg actctttacc gtgtccaaaa tatttttcaa tgcatccttc
     2821 atgtcaatat atacccacgg gcctgattct atttcgtcga tgacggaggt ttgcaacact
     2881 tcgtttattt ttcggtttgt agattcatca gcgcccggca gtcgcagcga aaaattttct
     2941 ccgaatgttg atcttaatgg aaagttcagc accttttttt cgtagcaggg ttcactaatt
     3001 acattgtact gagaaattaa ctgtttttga gtaaggccca gttcatttga tcggtgtatc
     3061 acagccaacg attgcctgtt cacaacactt ccgatgaaaa aagtgtctct agttcggatg
     3121 agtacagcat tggcgtcaaa ggaaaaaccc atgcaactgt cgtgcgcatg cttctttgaa
     3181 gccggaattt ggccggacgg aagatcaaat ggcgcggaat taaattcact tgcttgcagt
     3241 gtaacaaaat cgatactttg ttttttcgtg ctacaactgc aaaggccagc caaaacaagt
     3301 aggcagatcg ttagttcttt catgaaatca atttgcttag taagccgacg ttgaagggaa
     3361 tgaatcggct tgagaaaacg agttcgtaaa aagcgctttt agtttttcca attccgctgt
     3421 cttctcttgt gcttgcagtg attgataaag tcccagcaaa gaccacccgt taccaggatt
     3481 gcggacgagg tcttccctat acaccttttc cgcctgagca ggtttgttca attttagtaa
     3541 aaacgcgcca aggtattgtc gcgccggcag catccatgag tttggttcag catatacgag
     3601 gctgtcttcc gagattatcg cgttgttgat cgctgtaaaa gcttcattgt atttcttgtt
     3661 gcgaaaagca atgttcgcaa ccaaaatatt ttccgcgatc acagagcatg gataaggact
     3721 gcttacatgg ggaataaatc tcgccctaag cacactatct ttttgttttt cgcgcaagtc
     3781 gtgcacgaac gtttcagctt ttgccacatt gccggtcttt gcataagcca tgccttttgc
     3841 aaagtcatcc aaaacgcctg catacttcca atcgctgctg atcgatgaat tgtctgcgat
     3901 gatatcctgc catttgccca ttcgtaccat agcaagaagc ggaaacatat acaggtattg
     3961 gtcattagtg ttttcataat ttggatggac caggttccgt agagccatac ccttttcaat
     4021 ggatctctta tacataccgc cgcttagcgc gcagtaagta tagaccgcat agtaatgtga
     4081 ggaatgaagc gtcaggttca atccttgtgc cagcgatgcg taacgaccga ggctttcgtc
     4141 tgcttcatca tttacctcaa cgccctgtgc gtaataaccg atgcgttcat attcatggct
     4201 cgacatgtgc accatgtgtg cgatccccgg aaataatttt ttcagcgaat cggcgcttgg
     4261 caatgcgact tcaggtgtcc gcgatgcttc ggttacgtgt atgtagtaat gaagcgccgc
     4321 cgggtgatgt gggtcttttg ccaggatgtc tttgcagcat tgcaccaatt caggtgtcca
     4381 tgattttggc gtaccgtcag tattccagaa atcccacgga tgtaccaaca tcactgcatc
     4441 aacaaataaa gcttttacat ccaggtcagc cgggtatttg gcgacaagcg gcctgagcac
     4501 ttcaacataa tccttgttca gtcgtttcct ttctgtgtcg gcagtatcag ccaaattgta
     4561 ccttgccttc atagcactga tcaggtcttt ttctttttcg gtacaattcg ccgcattatg
     4621 atccattaac tcgattgcag caggtacgcc tttattcatt ttataagaat agccgccatt
     4681 gtatgttggt cccattgcaa gcgcctcgcc ccaataagcc atcgcacaag tactgtcaaa
     4741 tttcgcggct tgtttaaatg atgcgatcgc ttcgcgtgga tgatagccgt agtacatggt
     4801 tagcccctgg ttgaaataaa cttgagcgct gtcattttcc gttgtaatcg aatatgcgtg
     4861 atcaccccaa cccggtaaaa tagttatgaa gttgccgttg tcatctgcat aaaatgtttc
     4921 gcccgcatcg ggagcgcatc cgatcacagg agaacttctt gtagaataac tgctcacaga
     4981 ccgatgatca aaattttttg agacgagcgc aaggctagta actgccagca aaagcggagt
     5041 tagaataata accggccttt tcatatcaga aacatttcga tgttggcgat gctttaagtg
     5101 tcctcaatgc taactcaaaa gatagttttc aaaacggtgt cgttaaaata atttttcctg
     5161 tggcgggcga atgccctgca acctgatgta gatagtggtt tggccgcgat gatgcgtttg
     5221 gtgttcgaag gcttttgtca tcaacgcata ccttgtcagc ttcataccaa atatatcggt
     5281 cgtctcgccc cacttattca catcagacga ctgcacagcg ttaatgcaat aatcataact
     5341 ggtcgttacg taatacataa ccgagtcttt tgactgtgct cctgcgccgt gctcaaggtc
     5401 gtatccaaaa aatgcaggtg gctttgcatc ggtcgcgttt gacattagga gaatatttcc
     5461 gccggcaaga tggagcatct gttgcgcgaa gcttcttttg atgctatcaa caggctgaaa
     5521 agaatactta tcagcgggca tcgtgttcag gtattcgatc gtgtaagctt tagccctctg
     5581 ccaatcgctt accatctgcg cttttatttg gtcagaggta atagcttgtg cagaactaaa
     5641 actagtagta aaaacaagaa ctaatgtgag taatgatgag aaaagaaaaa gttttttcat
     5701 aaatgatttt cagaacaaga tagagaaagt tttcaattga aggctgcatg tcttttttgg
     5761 ttcgcgctta attcagtgca cgcaacaatc catcttttct catttcagag aacccttcat
     5821 cgaatgaaat caccggctca taatgcaatt ctctttccgc tttgcgcgac gtaatataaa
     5881 acggctgtcc catcaaaacc atagtttccc gcagatgcgt tggattatgc gatctcagcg
     5941 gaagcaatct ccatggcagt tcgataaggt cgcagataag tttcaacgtt ttccgcgatg
     6001 tagatcttga cggcacttta ataccctgtg tttcgataag cgtttctaaa aattgccgga
     6061 tcgtcagtgt ctcgccgtcc tgtatgtaat aaacgtgttt gctttttcca aagctggccg
     6121 cagccgccag gcctgcaacc aggttgtata catgacaagt ggagaacagg taattgccct
     6181 ggtcaatcca tgagaagtat ttattcttaa tgctttcgat caatttagga agggagaagt
     6241 tatctccagg accccaaaca aaaggagcac gtattatcac tgttgcaaga tcttcatcag
     6301 cagccgatag aacaattttt tctgcttcgg ccttgctgga tgcataactg ccaatatttt
     6361 ttttcggcat cgggtgttgt tcatcaatat ccgtcaatat agacccatcc gctattacag
     6421 cgagtgagct taagtagacc aattttttta caccgatctt tttacagtac tcgacgatat
     6481 ttttggttcc accggtattg atcgctaaca tagcttcggg cccgggcccg tgatcgaggg
     6541 tgcccgctaa atggaaaact gtgtcgaatt tgtgcagctt attgagtgat tccggtcgaa
     6601 gcagatcacc catcaccggg gtggcaccga gggcgcttac cgatgttgca gcatctctgc
     6661 ttctggccaa aacaaaaact tgcgcaccat tttgctttaa tttcttcaca aggtgttggc
     6721 ctataaatcc ggagccgcca gttacaaaca cattggtcat aaaaagttaa tcaataactc
     6781 gcatgaagtt gaataaaact accataatag atttgtattt cgcgatgacg tttggcgcat
     6841 catgactaca cgcgtgcaaa tcttttcgag agcgctttct atttcgcttt aatcttaccg
     6901 gcaagaaaaa tcataaagga agcgagtagc gctatcaacg cgaatgacca tcgtaaactt
     6961 gcagccttgg caatataacc gatgatcggc gggccaaata aaaaacccag gtaaccaacc
     7021 gttgacactg acgcgatcgc cattcctgca gacatcgttt ttgatcttcc tgccagtccg
     7081 taagccagcg gtacgatcga tgacactcca aaaccggtaa gtaaaaatcc gagcgtcgca
     7141 gtatagatgg ttggaaacac aatggccgtg agtaatccag acacgatcaa acaaccgctg
     7201 agaatcatca gccgcgcaac gccaatacgg gcgacaagct ggtcacctac aaacctgcct
     7261 gttgccatca tcgccatgaa cgccgtgtaa cctaaaggca cgagctgcat tggcgcatga
     7321 accacgtcgc gaaaatagat gccactccag tcgaacatgc aaccttcgca cgacatacag
     7381 caaaaagcga tcacaccgag ctttagtaaa aatttatcgg gcaaaacaaa gccggtacgt
     7441 gaacccgcat tgcgttcttc attcctgaga gaatggggga acatcaacaa agcgagcgct
     7501 gcaagtatgc atgcgataat tatgaaatga aaaagcggcg ccactttttg agataccatt
     7561 aaagtgccga tggccgcgcc ggtaaatccg gcgacgctcc agaggccatg gaaagatgcc
     7621 atgatcgaac ggcggtataa actttctacg ccaatagcct gtgtgtttat agaaatgttc
     7681 atcagatttc cgctcatgcc aaagaaaaaa agcactgtca tcaactccca tttttccgac
     7741 actgtaccca ataaacacag taatgccgcg tacagaaagg caccagtgaa catcacgata
     7801 cgactgccga gcttagttac cacgtagccg gcaatgggta agcttaccat tgaacctatg
     7861 ggtaaagcaa acaacgctga acctaattga gccgcgtcta aatgcagacg atgctgaacg
     7921 tctggtattc ttgatgccca gctggcaaag caaaaacccg tgataaaaaa gaaagcactc
     7981 acagagatgc gcgctgcgcg ctgaagtgaa atagtgcctc ccagcatcaa acaaagataa
     8041 ccggtggaat ttttttaaag tgttgagttg tgccatttgt tcaagattta cagccaggtt
     8101 ttttcgccca cttaaaggca cataagtggc tatgatcagc ctctcaacaa ctcaataaac
     8161 catctaacaa aaattgaatt gaaaacttct gaaacgaata ttgagttacg aactatttcg
     8221 tttatttgaa tgatatacag caatccggcc aactaaaatc ttcgagcatg atcaaaaatc
     8281 ttttacatgt tgctctccgg aattttacca gagacaaatg gtatagcctg cttaacatcc
     8341 tcggcttaac gatcggtatc actttcagcg tgtttctcat cttatatatc acggatgaat
     8401 tgagttacga ccggtataac gaaaaagcag atcgcattta ccgcgttgca tcttatgtaa
     8461 aagagccgga taaggatact atgaaatggg cattttgccc tttcccgatg gggcccgcat
     8521 tgagtgccga ctatcctgaa gtggaagaag cagtgcgcct gtgggataat ggtaaaacgt
     8581 taatcaaaaa cggcaacctg caattctatg agcaaaaagt gttttatgca gacagtaatg
     8641 tgttccgcgt gtttacccat caatttattg aaggcgatcc gagaactgca ttgatcgcgc
     8701 ccaggtcgct ggtgctcacg caatcgatgg cagaaaaata tttcgggaaa caggcaagct
     8761 atgtcggcaa gacgctacaa actgcgagcg acgacgttta taaagtaacc gccgtggtaa
     8821 aagacgtgcc cagaaattca cacctcatct tcaacatcct tgtatcaagg aattcgctgc
     8881 ccgccgattt tgcgaacaac tggggcggct ttggcttctt tacttacgtc ttattaaaac
     8941 caaatgtaaa tgctgctgct ctcgaaaaga agttgttgcc gatctatgac aaataccttg
     9001 cttccatttt tgcgcaatac aatattaaga tgcggtttgg cctgcaaccc gtcacttcaa
     9061 tccatctgca ttctgacatg acgggtgagc cggaagaatt aggcagcatg tcgtacatct
     9121 atattttttc ggcagttgct ttttttatgc tgctcatcgc atgcataaac tatatgaacc
     9181 ttactacggc gcgttccgca cgaagagcga aagagatcgg gattcgtaaa gtaacgggct
     9241 cttctaaaat gcagttgata ttgcaatttc ttgttgaatc tacgctaacc gccgtgttcg
     9301 cgctattact gagcattggc ctcatcgcat tgttgctgcc aacattcaat atgctttcgg
     9361 gaaaattcat ctcattcagt acactgttac aggcaaacac tttgcttatt ttattagcca
     9421 ttattgtttt tgttggaatc gttggcggca gctacccggc attctacctg tccaggttca
     9481 atcctatcca tgtgctgaag ggaagtcttg cgaaaggttc aagtaatgtc acactgcgac
     9541 gtgcgttggt ggttgtccag ttttcaattt caatgatcat gcttatctgc acatgggtag
     9601 tgtacggaca attaaaatac ctgcatagta aagatcttgg ctttaacaaa gaccaggtat
     9661 taaatgtcaa tgccaattct gaccaggacg ttcacagcaa aattctcgca tttaaaaacg
     9721 atatgcgcaa taacccgcat gtgctctcag taagtacttc gcaaggggta ccgggttcgg
     9781 gcatcaactt cagtcttttt tccatcgaaa caaaaaacgg ctttgtcgat aaaggtgtcg
     9841 actgttatgg agttgatgag gattatttca aaacactggg catgagaata gtgaagggaa
     9901 gaaatttttc aggtttgcca gacacattgc acagtattgt ggtaaatgaa aacatggtaa
     9961 aggaatatgg atggggcgac aaggcgatcg gcagaaaagt aaaatttccc ggcgacacgt
    10021 caggaaatta tcttgaagtt attggcgtcg tgaaagattt taatcagaaa tcattgtaca
    10081 atcccataac gccgttgctg ctgtattaca gacctaatag caacgggatc cagctaaagc
    10141 ttaaagcgaa ggatattgat gcgggtattg cgtcagcaga aaaaacatgg aaaaaatatt
    10201 ttcctgacct tccattcgcg tatacttttt tggaccagga ttttaattca caatatgcag
    10261 cagacgaaaa acgcggcaag atatttacag ctttttctgt attgaccatt ctgattacct
    10321 gcctcggctt attagggctg atcgcattta cgactgaaca gaggcaaaag gagatcagta
    10381 tccgtaaagt aatgggcgca aacgtggcgc agatcatccc gcttatcacc aggaatttta
    10441 tagcattggt tggactgtcg tgcctgattg cgtttccggt tgcctggtat ttcatgagca
    10501 attggctgga cattttcccg tacaacacgg gtttacatgt aacgcccttc ctcctttcag
    10561 cggtcgtcgt tttgataata acgttgctga cagttgtttt tcacaccgta aaggccgcga
    10621 tcgcaaatcc tgtgaaggca ttgaaggttg agtgatctga atccgatcga ataatattaa
    10681 agtgacagag ctaacgtcgt gttatagcat tattcggtgc aatgccggct gttgataatg
    10741 gcgcagagct tgcaatagac agaaatgcaa aaccgatcaa ttatgaaaaa cacaaaaaac
    10801 aaaaaccgcc agcctggttc acaggcacca aacgcgaatt ataatcctgc aaacagggat
    10861 ttccagcgca ccgaggatga cctcgacaat gtttcaaaat cagaaaagga tgaattgcaa
    10921 aggaggaaag atcgtacggc gaaagcgagc acaaaaccaa acaaacgaag aatgagctga
    10981 taaaaaaagg tcacagcaca ttgtgacctt ttttgcgaac aaggttgctt ttacgctgca
    11041 acccattgtt ttgctacgct gagttcagcc attgaaaaac ccttatactc tcccggagcg
    11101 ataaaattaa atgcatccgt gaattttctt accatttttt gatcgctcac aatcgcgatc
    11161 ctgtgccatt tattaaaata tttaaatcct gccttaagat cgtttgccca tgcgccaacc
    11221 gtgtagttgc tgacattggt ttcaaggaca atgatgagat tgattcttcc aatactttta
    11281 tccagggctt ccagtgctgg tattaaaacc tgtttgtagt cttcttccgt tacggcgtta
    11341 acagcacgaa cgcctacaac atgcggggga agatcttcga ttaactgcag catagtagca
    11401 acttgactca gatcattgaa ggaccagagt tctgatcatc aaatattatt tactcttgct
    11461 cgcgctcttt tttctgcccg aggttttctt tgcagagctt tttcttgcgg tttttttcgg
    11521 tgcagatttc ttggcgctct ttttagcgcc cttctttgaa gcggcttttt tgggcgcttt
    11581 cccgccttct tttctggctt cagacaaacc tatcgcgatc gcttgtttgc ggcttgtaac
    11641 ttttttaccg cttcttccac tttttaattt cccctctttc atttcatgca tactcttctc
    11701 aaccttgtcc tggctctttt ttccatattt tgccatgggt atagttttaa tgggtgatga
    11761 gatagaaact atacatcaaa ttatctgcca tatacatcga tcattgataa ggtacgtttt
    11821 cgaacactcc attttcgact ttcttccttt gatgatcact gtcgtccgta taggtgaagt
    11881 gaaaatttcc gctgagcaga ttcttctgtc tatcgaccga ggttacagtg atcgttccat
    11941 tgtatccaaa accaaaatcc ccggaaggaa aaatgtataa acccggagtg ccgaaacgga
    12001 cgattattat ggcactgtac gcaactgtgc tgtcgctatc aacaagctta agccggtagt
    12061 agacttttgt aaagaatggg tccgttaggg ccggcttttc gctaaaagaa tacgagtgtt
    12121 cttttgcgct gtttccctgg gcagctactt gtccaacgta atagaactgc atcccatcgt
    12181 agctatgttc aatttcaaac ctgttagtat tggcctcaga aagcgtaacc cagcttacgt
    12241 tgatataatt actatccgga acagcaagtt tcgcttgaaa agagaccaca actgccgacg
    12301 cctccttaaa cgtttgcgtt gatacggtgt cgttgaacgt ttgcaaaaac aggtagctgt
    12361 tgtcgtttct ctttgcacta atggcgaaat atccgacggg gccatatgga ggcactcgct
    12421 ccgcgtaaac agaatctgct ttccaatgca ctccctcaat atcggcttcg aatcgcggcg
    12481 aagcaaattc ggcgccgcca tcgcttttct tacaggctag aaatattatt accggggata
    12541 taaagattaa gagtcttcgc atagacttca tcgaagataa aatattcctg agtatacaca
    12601 cggcgcacgc tatatttatc ttgcagagaa atgttccagt ccaagaaaaa tataataacg
    12661 ggacgcaacc ctgttacgga agcgttaagg caaggcaaca acattgacaa gatacttctg
    12721 ttcaaaaacg cgtcgggtga atccgtcaat gaaattcgca ggctcgcaaa agagaggcag
    12781 gttcctgtac aatatgtgcc taatgagaaa ctcaacgcgc tgacaaatac gcagcaccag
    12841 ggagtgattg catttcgttc ggccattcaa taccaggacc tgcaacaagt gatcgactgg
    12901 ataaacgaca aaggagaacc ggctttattc ctcatgctcg acgggatcac ggatgttcgc
    12961 aatatcgggg gtatcgcccg aagtcttgtt tgttgtgggg cgcacgcgtt gataattcct
    13021 gaaaagggtg tgggcgcgct aaacgaagac gcggtaaaaa gcagcgccgg cgcactcgaa
    13081 caattgcagg tttgtcgcgt aagcagtttg ttgaaagctg ttgacgattt gcatttgaac
    13141 ggcataaaaa ttttctcaag cgaaatgcat gcaaaacaac gattgcacga attagatctc
    13201 t
//
LOCUS       DASQJI010000343         6366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2957244,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000343 DASQJI010000000
VERSION     DASQJI010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6366
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2957244"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /gene="hisS"
                     /locus_tag="VEV83_09625"
     CDS             complement(<1..1199)
                     /gene="hisS"
                     /locus_tag="VEV83_09625"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HYK45417.1"
                     /translation="MKPTLPQGTRDFNAEIVRKRNFIFNTIKTVFELYGFEPLETPAV
                     ENLETLVGKYGDEGDKLIFKILNNGLDRKEKREQVITDFEKVLEGKNVTAITERALRY
                     DLTIPFARYVAMNHGQLNLPFKRYQLQPVWRADRPQKGRYREFYQCDADVVGSTSLLN
                     EVELSNMYADVFRQLNIDVEININNRKILSAIAELCGGADKLNDITVPIDKLDKIGWE
                     KVKQELTDQGLSAEQTDLIEKYIHLDGSNEKKLDNLKQLVGEVEVGKKGITELEFILK
                     FQTKAQLNVDLTLARGLNYYTGTIFEVKAKHVQIGSIGGGGRYDDLTGLFGVPNLPGV
                     GISFGVDRIYDVMNELAIFPAAVQSGTRVLFFNLGEPEAKNSYQLMQQLRNRNISCEI
                     YHEQAKF"
     gene            complement(1216..1794)
                     /locus_tag="VEV83_09630"
     CDS             complement(1216..1794)
                     /locus_tag="VEV83_09630"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HYK45418.1"
                     /translation="MQPNNSTTTETIFRKTVGVYLCRMKILMVCLGNICRSPLAEGIL
                     QDKATKAGLHWTVDSAGTSSYHEGDPPHYLSQKVARLHGFDISKQICRRFVKQDILHF
                     DKVYAMDKEVYADIQRMSEELWDARKTSLIMDEVSPGQHIEVPDPWFGGEDGYHLVFD
                     MLNKACEVIVKRYKNQKSSSKESPQNLTSNLS"
     gene            1854..2678
                     /locus_tag="VEV83_09635"
     CDS             1854..2678
                     /locus_tag="VEV83_09635"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK45419.1"
                     /translation="MLPNQIKQSDVLDIIFEHRNKTYGAYALRKSYNKRLALALTFTL
                     LVAAMFSVLQLLDRSAEPIYATIVNIDDSHLIDLAPTPPPQQPLPPAPAQQSPVHSRE
                     IITSTPEIVSDVHQTTVPTIEDLNNSTVGRQISEGDIPLVGTVVSPAGNGNAQPANVP
                     AAEPAMSEAPLHTAEFMPEFPGGLEALKKFLLKNIRQPDDLQPGEKIVVRASFIVARN
                     GSIEQMKIINSGRADLDKEVLRVIGKMPSWKPGVQNGHEVSVYFNLPVTFVGADVE"
     gene            2718..2951
                     /locus_tag="VEV83_09640"
     CDS             2718..2951
                     /locus_tag="VEV83_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45420.1"
                     /translation="MENEFQRRRQRSYTTMRMIYDFTMAGLILAMAFILFFGDRMGLP
                     VVPDLDPFLRYGFGGLCFLYGSFRLYRGIRHDY"
     gene            2960..3886
                     /locus_tag="VEV83_09645"
     CDS             2960..3886
                     /locus_tag="VEV83_09645"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HYK45421.1"
                     /translation="MNRTKRLAFCLCLIFFFNDCRNKNQVYDSPVNGKINISVDESFK
                     PVVSEQIKVYESSYPNTQIVASYKSEADCFRDLQSDSTRMIIVSRGLTDDENEYYKQK
                     LSFKPQWDILAYDAVDVIVNIQSKDSVFTLEKLKNYLSGSDTGKMVVLDGRTQTSTVR
                     LLRDSLLKGRPFGKNVFATADSKQVVNYIAQNTNAIGFVGSGWVGDLDDPEQVAYKDK
                     IRFALVECRICEAGTYAKPSQSTIAQGQYPLVRPLYFILKENANGLGTGFVNYMSLER
                     GQLVFRRSYLVPAKIDFTVRKSTMESNKDLLK"
     gene            3900..5642
                     /locus_tag="VEV83_09650"
     CDS             3900..5642
                     /locus_tag="VEV83_09650"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK45422.1"
                     /translation="MKKIILSLIGLTTISSVVSAQNSVNDGIKFLYYERVTSAKQTLQ
                     RAVAANPKDALAIYWLGQAYMVDGQLDSAKLLYQNALNNGVNEPLLWVGAGHVEIMQG
                     GDVNTAKQHFEEAITASTPTKGRKIPNADVMNAIGRAMSTGGSNQGDPNYGIDKLKRA
                     AQLDPNNPEIYVNMGMCYLKLGGDHGGEAFEAFRQATQINPQYARAYYKIGRVYQTQR
                     NKESMDEWYGKAIAADVTFAPVYLQYFLYYSERDVNQAKEYLDKYVQYADKDCNTDYF
                     VGDYLFRAGKYQESLAKAREMQAGACKNFHRADMLYAYDYDRLGDSVQARQYMQTFFK
                     EADASEVEADDVAFAGKEYAKFPGLEDTAITYLLRAYEMDTVKENQIDYLTAAANVAA
                     KKNDFAKQFEIMNKMAALKGGKLSETDYFKMASAVTDAAKADTTSAFDEKKYRMADSI
                     ISSYISAYPDKPQGYSFRVRLAKMADRDSTRGLAIPAIQSQNQFLAKDTSTTAKQTIF
                     RNDTYLLIYNANYAPGDKAENYKKAIAIADEMMALYPDPASEENRYANSIKKQLVTAI
                     TPHGGVNKQNIKQQ"
     gene            complement(5750..>6366)
                     /locus_tag="VEV83_09655"
     CDS             complement(5750..>6366)
                     /locus_tag="VEV83_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HYK45423.1"
                     /translation="TSVNAHPVVNYALANAPVGQVAWYYIKMGITHIIPNGFDHILFI
                     VSLCLLSNNMKTILWQATAFTVAHSVTLALSLKNIIVAPGAVVEPIIALSILFVAVEN
                     IILHELKAWRIMIVFFFGLVHGLGFASALNQVGIPPDRFAEAVVSFNVGVELGQISII
                     ALVFSLIILPLSKKNFYRKTVVYPMSILIAIVAAYWVVERIIMM"
BASE COUNT         1849 a         1389 c         1438 g         1690 t
ORIGIN      
        1 tcaaattttg cctgctcatg atagatctcg caactgatgt tcctgtttcg aagttgttgc
       61 attaattgat aagaattttt tgcctccggt tccccgagat taaaaaataa cacacgcgtg
      121 cctgattgca cggctgccgg aaatattgca agttcattca tcacatcgta gatccggtcc
      181 acgccaaagc ttatgcccac acccggcaaa ttcggaaccc cgaacaaccc ggtgagatcg
      241 tcgtacctgc ctccaccgcc gatacttccg atctgcacat gtttggcttt cacttcaaat
      301 attgtccccg tgtagtagtt caacccgcgg gcgagagtaa ggtcgacgtt taactgtgct
      361 tttgtttgaa acttgagaat aaattccagt tccgtgatac cctttttacc aacttcaact
      421 tcgcccacca attgtttcaa attgtccagc ttcttttcat tgctgccatc aagatgaata
      481 tacttttcta ttaaatccgt ttgttctgca gaaaggcctt ggtcggtaag ttcctgcttt
      541 actttttccc agcctatctt gtcgagttta tcaataggca ccgtaatgtc attgagttta
      601 tcggcgccgc cgcacagttc agcaatcgcc gataagatct tccgattatt gatgtttatt
      661 tccacatcga tgttcagttg cctgaaaaca tcagcgtaca tattgcttag ctcaacttca
      721 ttcaaaagcg aagtactgcc aaccacgtcg gcatcgcact gataaaattc gcggtacctt
      781 cctttttgcg gacgatctgc tcgccacacg ggctggagtt gataacgctt aaaagggaga
      841 ttgagctgtc catgattcat tgctacatac cgcgcgaaag gaatggtgag atcgtaacgc
      901 aatgcacgtt cggtgatagc cgtcacattc ttcccctcta aaactttttc aaagtctgtt
      961 attacctgtt cgcgtttttc ttttcggtcg agcccgttgt tgagtatttt gaaaattaac
     1021 ttatcaccct cgtcaccata ttttccaacc aacgtttcca ggttctccac tgcaggtgtt
     1081 tcgagcggtt caaaaccgta tagttcaaag acagttttta tggtattgaa aataaaattt
     1141 cgcttgcgaa ctatttcggc attaaaatcc cgtgtgcctt gtggcaaagt tggtttcacg
     1201 cttctgacaa attaatcaac tcaagttaga tgttaagttc tgagggcttt ctttggagct
     1261 tgatttttgg ttcttgtatc tttttacaat cacctcacag gctttattca gcatatcaaa
     1321 aaccaaatga tatccatctt ctccgccaaa ccatggatca ggtacctcaa tatgctggcc
     1381 cggcgaaact tcgtccatga taagacttgt ttttcgagcg tcccataatt cttcactcat
     1441 gcgctggatg tctgcataaa cctctttgtc cattgcatag accttatcga agtgcaggat
     1501 atcttgttta acaaaacgcc ggcagatctg tttgctgata tcgaagccat gaagtcgcgc
     1561 aactttttgc gaaagataat gcggtggatc gccttcatgg taactgcttg tgcctgcact
     1621 gtcaacggtc caatgcaagc cggctttggt tgccttgtcc tgcaaaatcc cttctgccaa
     1681 cgggctgcga caaatattgc cgaggcatac catcaagatc ttcatgcggc aaagataaac
     1741 gcccaccgtt ttgcgaaaaa tagtttcggt tgttgtggaa ttattcggtt gcacgcatct
     1801 tatttggaac aaagcgctct ggcaaatttt ttatcatcct aaaaatattt tttatgctgc
     1861 ccaaccaaat caagcagagc gatgtgctcg acataatttt tgaacatcgc aacaaaacct
     1921 acggagccta tgcacttaga aaaagctaca acaaacgact ggcactggcg ttaactttca
     1981 ccttgcttgt cgcagcaatg ttcagcgtat tgcaattgct tgaccggagt gcggagccga
     2041 tctatgcgac aatcgtaaat attgatgact ctcacttgat cgacctcgcg ccaactccgc
     2101 caccgcagca acccctgcca cccgcgcctg cacaacagtc cccggttcac tctcgggaga
     2161 taattacttc cacgccagaa attgtgagcg acgttcatca aaccactgtg ccaacgatag
     2221 aggatttaaa caacagcacc gtcggaagac aaatttctga gggagatata ccattagtcg
     2281 gcacggtcgt gagtccggca ggtaatggca atgctcagcc cgcaaacgtg cctgcggccg
     2341 agccagcgat gagtgaagcg ccacttcata cggcggagtt catgcctgaa tttccaggtg
     2401 gccttgaagc gctgaaaaaa tttctgctga aaaatatcag gcaacctgat gacctgcaac
     2461 cgggagaaaa gatcgtggtg cgtgcgtcgt tcatagtagc aagaaacggg agcattgaac
     2521 aaatgaaaat aatcaacagc ggaagggcag acctcgacaa agaagtactg cgagtaatag
     2581 gaaaaatgcc gtcatggaag cccggcgtgc aaaacggtca tgaagtatct gtgtatttta
     2641 atttgcctgt aactttcgtt ggggctgatg ttgaataaaa aatattttat attgccactc
     2701 ccattttaaa gagttgcatg gaaaacgaat ttcaacgaag acggcagaga agttatacga
     2761 cgatgcgtat gatatacgac ttcaccatgg caggtctgat acttgccatg gcgtttattt
     2821 tatttttcgg cgacagaatg ggtttgccgg tagttcccga tcttgatcct tttttaaggt
     2881 acgggttcgg tggattatgt tttttatatg gaagctttag attgtacagg ggaatcaggc
     2941 atgattatta attttgaaga tgaatagaac gaagcgatta gcgttttgcc tgtgcctgat
     3001 attttttttc aacgattgcc ggaataagaa ccaggtatat gattcgcctg taaatggaaa
     3061 aattaacatc agtgtagatg aaagctttaa accagttgta agtgagcaaa tcaaagtgta
     3121 tgagtcatcg tacccaaata cacagattgt cgccagttat aaatctgaag cagattgttt
     3181 cagagattta cagtctgaca gcacgagaat gataattgtt tcgagaggtt taacggatga
     3241 tgagaatgaa tattacaagc aaaaattatc gttcaagcca caatgggata ttttagcgta
     3301 cgacgctgta gatgttatcg taaacattca atcgaaagac agcgtgttta cgctggagaa
     3361 actgaagaat tatttgagcg gaagtgatac gggcaaaatg gttgtgcttg atggaagaac
     3421 gcagacgagt accgttcggt tactcagaga ttccctacta aaaggaaggc cgtttggaaa
     3481 aaatgttttt gcaacagccg acagtaagca agttgttaat tacattgcac aaaacacgaa
     3541 tgccattggc ttcgtgggtt cgggttgggt aggcgattta gatgatccgg agcaggtagc
     3601 ttataaggat aagattcgct ttgcgctggt tgaatgcagg atatgcgagg cgggtacgta
     3661 tgcgaagcca tcgcaatcta ccattgcgca gggacaatac ccgttggtac gtcctttgta
     3721 tttcatattg aaggagaatg caaacggttt aggtacagga tttgtgaatt atatgagtct
     3781 cgaaaggggc caactggttt tcagaagaag ttatcttgtt cctgcaaaaa tcgatttcac
     3841 ggtaaggaaa tcaacgatgg agtcaaacaa agatctttta aaataaacaa acaagaataa
     3901 tgaagaaaat aatcttatcg ctaattggtt tgacaacaat atcgtccgtt gtttcagccc
     3961 aaaattctgt aaatgacggg attaagtttc tgtattatga acgtgttacc agcgcaaagc
     4021 aaacgttgca acgagcggtt gccgctaacc caaaagatgc ccttgcaatt tactggcttg
     4081 gccaggcata catggtggac ggccagctcg acagtgcaaa actactctat caaaatgcgc
     4141 tgaacaacgg cgttaatgaa cccttgcttt gggtaggcgc gggtcacgtc gagatcatgc
     4201 agggtggtga cgtaaataca gccaaacagc atttcgaaga agcgatcact gcgtcaacac
     4261 caacgaaagg aagaaaaatt ccgaacgcgg acgtaatgaa tgcaattgga agagcgatgt
     4321 caactggcgg cagcaaccag ggagatccga actacggtat cgacaaactc aaaagggccg
     4381 ctcagcttga tccgaacaat ccggagatct atgtaaacat gggcatgtgc tatttgaaat
     4441 tgggcggcga tcatggcggt gaagcctttg aggcatttcg ccaggccacc cagataaatc
     4501 cgcagtatgc gcgtgcatac tataaaattg gaagagttta ccagacacag cgcaacaagg
     4561 agtcgatgga cgaatggtat gggaaagcga tcgctgccga cgttacgttc gcgccagtct
     4621 acctgcaata tttcctttat tattccgaaa gggatgttaa ccaggcaaaa gagtatttgg
     4681 acaaatacgt acagtatgct gataaggatt gtaacactga ctattttgta ggtgattatc
     4741 ttttccgcgc aggcaaatac caggaatcac tggctaaggc aagggaaatg caagccggtg
     4801 catgtaagaa tttccaccgt gctgatatgc tgtatgctta cgactacgac aggttgggag
     4861 attcagtgca ggcacggcaa tatatgcaaa cgttttttaa ggaggcagac gcatcagagg
     4921 tagaggcaga tgatgttgcc tttgccggaa aagaatatgc gaaatttcct ggtcttgaag
     4981 acacggccat tacttacctg ttgagggcat atgagatgga tacggtcaag gaaaaccaaa
     5041 ttgactattt gacagctgcc gctaacgttg ccgcgaagaa aaatgatttc gcgaagcagt
     5101 ttgagatcat gaataaaatg gctgcattga agggcggcaa gctttcagag acagattatt
     5161 tcaagatggc atcagcagtt accgacgctg ccaaagcaga tactacttcc gcatttgatg
     5221 aaaaaaaata ccggatggct gattctatca tcagttctta cataagcgca tacccagata
     5281 agccccaggg atattcgttt agagtgcgcc tggcgaaaat ggcagatagg gatagtacgc
     5341 ggggattagc gattccggcg atccaaagtc agaatcagtt tttggcaaag gacacttcaa
     5401 ctacggcgaa gcaaaccatc ttcaggaacg acacctattt attgatctat aatgctaact
     5461 atgcgcccgg cgacaaagcc gaaaattaca agaaggcaat tgcgatcgcc gacgagatga
     5521 tggctttata tccggatccc gcctcggaag aaaatagata tgcaaacagt attaaaaagc
     5581 aattggtaac tgcgatcact ccccatggag gagttaacaa gcaaaatata aaacagcaat
     5641 agaagcagaa aaaaggctcc ttcacacgaa ggagcttttt ttctgctatt ccaaatctca
     5701 aatcccaaat cctcaatcct aagtcccaaa tcgtgaatcg tggctacatc tacatcatta
     5761 tgattctttc aaccacccaa taggcggcta cgatggcgat gagaatggac atcggataca
     5821 caaccgtctt cctgtaaaaa ttctttttgc tgagtggcag gatgatcaat gagaaaacca
     5881 gcgcaattat gcttatctgt ccaagctcca caccgacgtt gaaacttaca accgcttccg
     5941 caaacctgtc cggcggaatg cccacttgat ttaatgcact cgcgaagccc aatccgtgta
     6001 ccaggccaaa gaaaaatacg atcattattc tccatgcctt taactcatgc agaataatgt
     6061 tttcaaccgc aacaaaaagt atcgagagtg ctattatagg ttcaacaacg gctccgggag
     6121 cgacaatgat gttcttcagg cttagtgcaa gtgttacaga atgagcaacg gtaaacgctg
     6181 tggcctgcca aagaatggtc ttcatattat tactcaacag gcaaaggcta actataaaaa
     6241 gtatgtgatc aaatccatta ggaattatat gggtgatacc catttttatg tagtaccatg
     6301 ctacctggcc aacaggtgca tttgcgagag catagtttac caccgggtgc gcgtttacgc
     6361 tcgtga
//
LOCUS       DASQJI010000344         3488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_807841,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000344 DASQJI010000000
VERSION     DASQJI010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807841"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VEV83_09660"
     CDS             <1..439
                     /locus_tag="VEV83_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45424.1"
                     /translation="IIFQWPHIVSTAAISVICAVSLFVLSYHAKQYRFAGNVVKNTIH
                     VIDSLHNKTRLIADRVPQENFGALIFRAGFPEGVNWLKNPSTFDTVIVLSQSHVDLPL
                     RKNYPGVYSHNVLLIPDTTIRNRFSVNDVYFLYTDSALNIISR"
     gene            complement(1626..2336)
                     /locus_tag="VEV83_09665"
     CDS             complement(1626..2336)
                     /locus_tag="VEV83_09665"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HYK45425.1"
                     /translation="MYVKHKICVLASIACFLTGNAAHTDHPGYVENMRNEKQLTWLAL
                     GDSYTIGETVQEDKRFPAQAIAMLKADGFNFSQPTYIATTGWTTQDLLNAIQKQPLSV
                     PYDIVSLLIGVNDQYQHLDTAGYRERFTECLEAAIRFAGNNRDHVFVLSIPDYSVTPF
                     AADSDTTQIAKEIDEFNAINKAITLSYNVSYIDITPLTREADDDRSLIANDGLHPSEK
                     EYARWAELLSGEINRILV"
     gene            2449..>3488
                     /locus_tag="VEV83_09670"
     CDS             2449..>3488
                     /locus_tag="VEV83_09670"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HYK45426.1"
                     /translation="MAEKIKVTNPVVELDGDEMTRIIWKFIKEKLILPYVDVDLKYYD
                     LGVEYRDQTNDQVTVDAANAIKQYGVGIKCATITPDEARVKEFNLKQMWKSPNGTIRN
                     ILDGTVFREPIVCKNVPRLVPNWTAPICIGRHAFGDQYRATDFVTKGKGKLTIRFEGE
                     DGNTIEHEVYSFKGDGVALAMYNTDESIRGFARACFNQAIMKQWPLYLSTKNTILKKY
                     DGRFKDIFQEIYENEFSSKMDELKITYEHRLIDDMVASALKWNGNFVWACKNYDGDVQ
                     SDTVAQGFGSLGLMTSTLVTPDGKTMEAEAAHGTVTRHYREHQKGKPTSTNPIASIFA
                     WTRGLEFRGKLD"
BASE COUNT          964 a          691 c          765 g         1068 t
ORIGIN      
        1 gataatattt cagtggccgc atatcgtgag cactgccgcc atatccgtta tttgcgcagt
       61 atcacttttc gtactttcat atcacgcaaa acaatatcgt ttcgcgggta acgtagtgaa
      121 gaatacaatt catgttattg atagtttgca taacaaaacg cgcctaatcg ccgaccgtgt
      181 gccgcaggaa aattttggcg cactgatctt tagagcgggt ttccctgaag gggttaactg
      241 gcttaagaac ccgtcgacgt tcgatacggt gatcgtgttg tctcaatcgc acgtggatct
      301 tcctttgcga aaaaattatc ctggtgttta cagccataac gttttattga tacctgacac
      361 caccattcgc aacaggttct cagttaatga cgtgtatttt ttatacaccg attccgcttt
      421 aaacattatt tcaagataat tggatagtcg ataaacaagg tttcataaat atgatttgaa
      481 atgcccgcga cgacaagcga caaaaacaat tccgttattc aaaaaaggtt tttatccatc
      541 ctgtttttcg tgtggctcat catccaactt ttcaccctct ctcaatttgg cattgttaca
      601 cacaacgagg ctgtgaaata cataaatgaa gcacaatttt ttttaaatca tggtcattat
      661 tctgaacaga aatatctttt ctactctgcc tacatctttt tgcacgtgct atttttaaag
      721 gccgggtttg aaattacagg cgtttatctc acccagctat ttgggagtct atttgcgatg
      781 ttttttttct tcaaaacagt ttatcgggtt tccaaaaatg ttaagcaagc cttcgtaacg
      841 actttcctgc ttttggtttg ctatacatgg cagtggtgga cggttttttt gtacacggaa
      901 tctttgtttt gttcactctt gatcattttc acttacttgg tttttggaat caaaaagaga
      961 gtcataatgc acgacgttct ggccagtctt gtgttcattt taatattatt tgcaaggccg
     1021 accggcatac ttcttatccc ggtaatttgt ttgcttctct tctacaagct tattaaaagg
     1081 aagaaaatta taagtgcaat tgttttcggg ttggttattt tttctgtttt tgttattctg
     1141 ctgaatttta gtatgaacgc agggtcagat tttgatttta taaaacctct tgtcgaaaac
     1201 aatgttctct gctatgactc ggaggaacct gtaattggaa ttcatattaa tgaccacggt
     1261 ctcaagggag ttattgatta cattcaagat tatccgggga atttcttgag actggccgga
     1321 ctaaaatttg tttcttactg gagtctcacg cggccaggta actcggccct tcacaactgg
     1381 tggctcagat tattttttta cccgctatac gcctgcggat ttatcggcat atttaatctt
     1441 aagaaaggtc aaacatattt tttgctttat tgccttggca tctttgcaat ttttacaacc
     1501 agtgtaatgg tttcatgtga tgattcggac aaccggttta ttgtcgccgt aataccttta
     1561 gtgattttct tggcaggttt tgggattaac cgggttttcc cgaagttgtc aggaacaaaa
     1621 agcgcttaaa caaggattcg attaatctca cctgagagca attctgccca tcttgcatat
     1681 tctttttcgg atggatgtag tccgtcattt gcgatcagcg atcgatcatc gtctgcttcg
     1741 cgggtaagtg gcgtgatgtc aatgtatgaa acattgtaag aaagtgtaat cgccttattg
     1801 atggcattga attcgtcgat ctctttcgcg atctgcgtcg tgtcgctatc ggcagcaaat
     1861 ggcgtgacac tataatcagg gattgaaagg acgaacacat gatcccggtt gttgcctgca
     1921 aatcttattg cggcctcaag gcattcggta aatcgttcac ggtatcctgc tgtatcgaga
     1981 tgttggtatt ggtcattcac cccaattaaa aggctcacga tatcataagg cacggacaac
     2041 ggttgttttt ggatcgcatt taataggtcc tgcgttgtcc agcctgtagt tgcgatgtaa
     2101 gtaggttgtg aaaaattgaa gccatcggct tttagcatgg caatcgcttg agctggaaag
     2161 cgcttatctt cctgcacagt ttctccaata gtataagaat cgccaagtgc gagccaggtc
     2221 aattgttttt cgttcctcat gttttctaca taaccgggat gatcagtgtg agcagcattg
     2281 cctgttagga aacaggcaat gctggcaaga acacaaatct tatgctttac atacatattc
     2341 catttacgta agcaattaca ttcttgtttt gcccgtgtgt aaaaataatc aaacgcttac
     2401 ttttgcggca aggctccaat caggagaata atcaaaaaac caattgcaat ggctgaaaaa
     2461 atcaaagtga ccaacccggt ggttgaactg gatggcgatg aaatgacgcg tatcatctgg
     2521 aaattcatca aggaaaaact aatacttccg tatgttgacg tcgacctgaa atattacgac
     2581 ctcggcgtcg aataccgcga ccagacaaat gaccaggtta cggtcgacgc agccaatgcg
     2641 attaaacaat atggcgtcgg tattaagtgt gcgaccatta ctcctgatga ggcgcgcgta
     2701 aaggaattta atttgaagca gatgtggaag agtccgaatg gaactatcag gaacattctt
     2761 gatggcaccg tatttcgcga gcctattgtt tgtaaaaatg tcccacgttt agtgccaaac
     2821 tggacagccc caatttgtat tggccgtcat gccttcggcg atcagtatcg tgctacggat
     2881 tttgtgacaa agggaaaagg aaaacttacc atcaggtttg aaggcgaaga tggaaacacg
     2941 atagaacacg aagtttatag tttcaaaggc gatggtgttg cattggcgat gtacaataca
     3001 gatgaaagca ttcgcggttt tgcaagggca tgcttcaacc aggcgatcat gaagcaatgg
     3061 ccattgtatt tgtcaacaaa gaatacaatt cttaaaaaat atgatggacg ttttaaagac
     3121 attttccagg agatctatga aaatgagttc agttcgaaaa tggacgagct caagataacg
     3181 tatgaacacc ggttgatcga tgacatggtt gcgagtgcat taaagtggaa tggaaatttt
     3241 gtatgggcat gcaaaaatta tgatggcgat gtgcaaagtg atacggttgc ccaaggcttt
     3301 ggaagtttag gattaatgac atcaacgctc gtcacacccg atggtaaaac gatggaagca
     3361 gaagccgcac acggtactgt aacgcggcat taccgggagc accaaaaagg aaagccaact
     3421 tcaaccaatc ctatcgcatc gatcttcgca tggacgcgcg gtttggagtt tcgtggaaag
     3481 ctcgataa
//
LOCUS       DASQJI010000345         3521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_39326,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000345 DASQJI010000000
VERSION     DASQJI010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39326"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /locus_tag="VEV83_09675"
     CDS             complement(<1..479)
                     /locus_tag="VEV83_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HYK45427.1"
                     /translation="MKKILVANRGEIALRIMRTIRKMGIKSVGVFSEADRNSRHVLFA
                     DEAVCLGPAPSSQSYLNAEKIISFAKELGADGIHPGYGFLSENADFAQKVEEAGIVFI
                     GPNADAMRIMGSKLAAKESAKKYNIPMVPGIQQAITDIQLAKDIATEVGYPVLIKASA
                     "
     gene            complement(558..1049)
                     /locus_tag="VEV83_09680"
     CDS             complement(558..1049)
                     /locus_tag="VEV83_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HYK45428.1"
                     /translation="MPGNNDIFTIQVNEFIFQTTLEELGSSDIITRSPTEFHLIHNHR
                     STTGKVHECDLTGKKLRVEVDGEMFEVEIKDPLDQMLEKMGFGMPDGKHIDDIRAPMP
                     GLVLHISVTEGQEIKQGEPVLVLEAMKMENSIVLPGDAKIKKILVKTGQTVEKGEVLV
                     ELE"
     gene            complement(1195..2301)
                     /gene="mtnA"
                     /locus_tag="VEV83_09685"
     CDS             complement(1195..2301)
                     /gene="mtnA"
                     /locus_tag="VEV83_09685"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HYK45429.1"
                     /translation="MKVNGENYRTIWLNEDDDSTISIIDQRHLPHQFVIEDLRSVREV
                     VTAIKDMHVRGAGLIGATAAHGMYLAAIEASNKIRFDEHLTACAIELKDARPTAVNLE
                     WAVNLQVDCIKKGVSSSDKITIAKETAVSIANDDAAFCKRIGEHGVKIIEKIAKRKNG
                     NVVNILTHCNAGWLAFVDHGSATSPVYEAFERGINIHVWVDETRPRNQGAGLTAWELI
                     NQGVPHTVITDNAGGHLMQHGLVDMVITGADRVTRSGDAANKIGTYLKALAARDNDIP
                     FYVALPSSTFDWNITDGLKEIHIEQRGDEEVKYISGWCDGDIKKVLITPLNSPASNYG
                     FDVTPARLITGLITERGVCKPSEDAILKMFPENK"
     gene            complement(2382..>3521)
                     /locus_tag="VEV83_09690"
     CDS             complement(2382..>3521)
                     /locus_tag="VEV83_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45430.1"
                     /translation="SAFDFGAFQDAVVGINLIIGDTVDDIVYVERDSKPALNNVFASR
                     IHARIIRNDGLFNAALVGLGSFGFIHGIVIEAEDLFLLNRYVKKINKEIALQLAETFD
                     FENSAFVIPEETDANGKPNRPFHYKFFINPYVDDDDYVVEAMYKKPYHSGYPDPIPRI
                     KTSIYRDLILLFTCIAERFKGSIPLLVNFLQKGVLPPPDLETTGTLAEMFWDAGYLGK
                     AYAVSVGVDHRDSRKALELLVDLAKREGPIPGLYAMRFVKQSGATLAFTRFPVTSVIE
                     IDGLNWDPKTDKLISLEKFCTRIIEVFQQNNISFTQHWGKNADWSFPGLIDYMYGDKA
                     LEWMQHRSAFLTPRQALLFSNEFLDDTGLSRYVVDAPVAFAESVV"
BASE COUNT          898 a          845 c          739 g         1039 t
ORIGIN      
        1 gcagaggctt taatgaggac gggataacca acttctgttg caatatcttt tgccagttgt
       61 atgtcggtga tggcttgctg tatccccggc accatgggaa tgttatattt tttggcactt
      121 tcttttgccg caagctttga acccatgatc cgcatggcat cggcattcgg accaataaat
      181 acgattccag cttcttcaac cttttgcgcg aagtccgcgt tctcactcag aaaaccgtaa
      241 cccggatgga tgccgtccgc accgagttcc tttgcgaacg aaattatttt ttctgcattc
      301 aaatatgatt gactggatgg tgcaggccct aaacaaacag cctcgtctgc aaataaaaca
      361 tgccttgaat ttctgtctgc ttcagaaaaa accccgacag atttgatacc cattttgcgg
      421 atagtgcgca tgattcgcaa agcgatctca cccctgttgg ctaccaggat ctttttcatg
      481 aatgtttaaa ttgttttttg attttttcct ggaccgattt tttcataagg caacgttcgg
      541 agtttgcggc ctaataatca ttcgagttca acgagcactt ctcccttctc gacagtctgc
      601 ccggttttca caagaatctt tttaattttt gcgtcaccag gtaatacgat gctgttttcc
      661 atcttcatcg cttcaagaac gaggacaggt tctccttgtt ttatttcctg gccttcagtt
      721 accgatatgt ggagcaccag cccgggcatc ggtgctctta tatcatcaat atgttttcca
      781 tcgggcattc caaagcccat tttttcgagc atttgatcca gcggatcttt tatctccacc
      841 tcaaacattt cgccgtccac ttctacccgc aatttcttcc cggtcaaatc gcactcatgt
      901 acttttcctg tcgtcgaacg atgattgtga ataaggtgaa attcagttgg cgagcgtgtg
      961 attatatcac tcgatcccag ttcttcaagt gtggtttgaa aaataaattc gttcacctgt
     1021 attgtaaaaa tgtcattgtt acccggcatc tattttgttt tcgcgaattt aatgattagt
     1081 gctatgtaag gtttgcgcaa aataatttat catggcgcgc gttcaattcc tcatcaattc
     1141 gaaatcaagg acgcaatccg aattcaattt aatgacggcc tctagtcaaa tgccttattt
     1201 gttttcagga aacattttaa gtatcgcgtc ttcactcggt ttacaaacac ctctttcagt
     1261 tattaagccg gtgataaggc gagcaggcgt cacatcaaaa ccataattgg aggccggact
     1321 gtttaacgga gttatcaaaa ctttttttat atcaccgtcg caccagccgg aaatatattt
     1381 gacttcttca tcgcctcttt gttcgatgtg tatttctttt aagccatcag taatgttcca
     1441 gtcaaacgtc gatgaaggca gcgccacata aaatggaata tcgttatcgc gcgcggcaag
     1501 tgctttaaga taagtgccta ttttgttcgc agcatcaccg cttctcgtta cacgatcggc
     1561 accagttatc accatgtcca ccaatccgtg ttgcattaaa tgtccgccgg cgttatctgt
     1621 aattactgtg tggggtacgc cctggttgat cagctcccac gccgtcaagc cggcgccctg
     1681 gttacgcggt cttgtttcat caacccacac atggatattg atcccccgct cgaaggcttc
     1741 ataaaccggc gaagtggctg aaccatgatc aacgaacgca agccatccgg cgttgcagtg
     1801 cgttagaatg tttacaacat ttccgttttt tcttttagca attttctcaa tgatctttac
     1861 accgtgctcg cctatacgtt tgcaaaatgc ggcgtcatca tttgcgatcg aaacggcagt
     1921 ttcttttgca attgttattt tgtcgcttga agagacgccc ttttttatac agtcgacttg
     1981 cagattaacg gcccattcga ggttaacagc ggtaggtcgc gcatctttta attcaattgc
     2041 acatgcagtc aggtgctcgt cgaagcgaat tttgttgctg gcttcaatgg cagcgaggta
     2101 cataccgtgc gctgcagtgg cgccgatgag tccggctccg cgcacatgca tatcctttat
     2161 ggccgttaca acctcacgta ctgaacgcag gtcttcgatg acaaattgat gtggcaaatg
     2221 acgttgatca atgatgctga tagttgaatc gtcatcttca ttcaaccaga tcgtcctgta
     2281 attttcgccg tttactttca tacaagttgc atgaagataa ggcacgccgg caatttacct
     2341 ttcgaaagaa cgaaggcgat aagaataaaa gcgccgagcg attaaacgac cgactctgca
     2401 aaagcaaccg gcgcatcaac tacgtacctt gataatcctg tatcatccaa aaactcattt
     2461 gagaaaagca atgcttggcg cggcgtaagg aaggcgcttc ggtgctgcat ccattcaagg
     2521 gccttatcgc catacatata atcgattaat ccagggaagg accagtcagc atttttgccc
     2581 caatgttgag tgaaagaaat attgttctgc tgaaatactt cgatgatacg tgtgcaaaat
     2641 ttttcgaggc tgataagctt gtcggttttt gggtcccaat tcaggccgtc aatttcgatt
     2701 acggatgtaa caggaaatct tgtaaacgcg agcgttgcac cggattgctt tacaaatcgc
     2761 attgcataaa gacccggaat gggcccttct ctttttgcga gatccacgag aagttctaat
     2821 gccttacggg aatccctgtg atctactcct accgaaacgg catatgcctt accgagatag
     2881 ccggcatccc agaacatttc ggccagcgtt ccggttgttt ccaaatcggg cggtggcagc
     2941 actccctttt gcaaaaaatt taccaggagc ggaatgctac ctttaaatct ttctgcgatg
     3001 cacgtgaata agagaatgag atcacgatag atcgacgtct taattcgcgg tatcgggtcc
     3061 ggatagccac tgtgatacgg ttttttatac atggcttcaa ccacgtagtc gtcatcatcc
     3121 acatatgggt tgataaaaaa cttgtagtga aacggccggt taggctttcc atttgcatcc
     3181 gtttcctccg gaattacaaa agccgaattt tcaaagtcga aggtttctgc aagctgcaat
     3241 gcaatttctt tgttgatctt tttgacgtag cgattcagca aaaacagatc ctccgcttca
     3301 atcacaatgc catgtataaa accaaacgag ccaagcccaa cgagcgcagc attgaacaac
     3361 ccgtcatttc taattatcct ggcatggatc cgacttgcaa aaacattatt cagtgcgggt
     3421 ttgctatcgc gttcgacata aacaatatcg tcaacggtat ctccgatgat caggtttatc
     3481 ccaacaactg cgtcctggaa ggcgccaaaa tcaaatgcag a
//
LOCUS       DASQJI010000346         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_960977,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000346 DASQJI010000000
VERSION     DASQJI010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960977"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /gene="hemH"
                     /locus_tag="VEV83_09695"
     CDS             complement(<1..977)
                     /gene="hemH"
                     /locus_tag="VEV83_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HYK45431.1"
                     /translation="MNTNKRAIILMNLGSPDSTEVKDVKKYLTEFLMDKRVIDSPYLV
                     RSLIVKGMIVPFRAAKSAEAYRSIWTKDGSPLIVLTRQLQEKLQEQVEEPVEISMRYG
                     NPSSEDVLEKLHSNNPQLEEVVLLPLYPHYAMSSYETAVADMKDVHLKKQYASRLVTI
                     DPFYNSEFYIDALAESIRPYLQNDFDKILFSYHGIPERHVRKTDITGCHCLQVKDCCE
                     VDSPAHKYCYRHQTFMTTKLVAKKLELPPEKFEHTFQSRLGRDPWLTPYTAARLTELP
                     KEGVKKLLVACPAFVSDCLETLQEIAMEGKESFLESGGESFETIPCLNV"
     gene            1110..2315
                     /gene="hemA"
                     /locus_tag="VEV83_09700"
     CDS             1110..2315
                     /gene="hemA"
                     /locus_tag="VEV83_09700"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HYK45432.1"
                     /translation="MDINKLCIAGINYKKAEAEMRGLFAIDNVQHGSILSAAGFLGIN
                     EIFVLSTCNRTEIYAIAEDSEVLINLLCSQTAGDAETFKRSAYIKKGKDAVEHFFNVG
                     AGLDSQILGDYEIVGQLKTAVKFAKQNGKIGANLERLVNSVLQASKLIKTNTQLSGGT
                     VSVSFAAVQYIKNHVKNIRDKKILLLGVGKIGSNTCKNLVDYLHTNNITLINRSEEKA
                     FGLAAELNLRSASIDQLDTEIKAADIILVATNAGEPVIMASHVKDAGTKIIIDLSLPC
                     NVEESARCFENIQVVNVDELSKLKDETLAKRQAEIPKARAIIAEVMQEFFEWYELRRH
                     VPVLKDLKVKLRQIHSYSIIHTDPSYSLETLDIKIQQVLNETAGRMKTTNLKGCHYIT
                     AINEFMRTG"
     gene            2319..3296
                     /locus_tag="VEV83_09705"
     CDS             2319..3296
                     /locus_tag="VEV83_09705"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0018160 - peptidyl-pyrromethane cofactor
                     linkage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HYK45433.1"
                     /translation="MSKILRIGTRDSQLAVWQATCVQNLLKQAGVDSELVYIKSEGDV
                     DTITPLYALGVQGVFTRTLDAALLNNRIDIAVHSMKDVPVQLANGVRQAAVLKRGSHK
                     DIFVYNDKSSLQELGVVNGEWLPANGAHHSSLITHDFIIATSSTRRMAQWLNRYPNHR
                     IENLRGNVNTRLRKLKESNWNGAIFAAAGLERIDLRPENSVELDWMLPAPAQGAIMVA
                     CRHDDPFSFDSCQSFNDEHTALCTKIERDFLKELMGGCSTPIAGIAEMKGNNILFRGN
                     ILSPDGKEKVETVLSVPKSMAGELGQQAARDILQKGGQPILDKFKTDAK"
     gene            3268..>3668
                     /locus_tag="VEV83_09710"
     CDS             3268..>3668
                     /locus_tag="VEV83_09710"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HYK45434.1"
                     /translation="MINSKLTQNKITILSTRPIDDELINEAAKQNINIEVFSFIATEP
                     IDDLDTYNEIEIALTETATIVFTSMNAVDAVASHLNEFGPDWKIYCIGNATRKLVAEH
                     FGDNSITGMANDATELAQKIIDDDIDDVIFF"
BASE COUNT         1063 a          806 c          840 g          959 t
ORIGIN      
        1 tgtacattca aacaagggat cgtctcaaaa gattctccgc ccgattctaa aaaactttct
       61 tttccctcca tggcaatttc ctggagcgtt tccaggcaat cgcttacaaa cgcaggacac
      121 gcaaccaata attttttcac cccttctttc ggcagctctg tcagtcttgc ggccgtatat
      181 ggggtaagcc agggatctct tcccagcctc gattgaaatg tatgttcaaa tttttccggc
      241 gggagttcta attttttggc caccagcttc gtcgtcataa atgtttggtg cctgtagcaa
      301 tatttatgtg ccggcgagtc cacttcacag caatctttta cctgcaaaca atggcagcct
      361 gtgatatccg tttttctaac atgccgctcc ggaataccat gataactgaa tagaatttta
      421 tcgaaatcat tttgcaggta aggcctgata ctttctgcca gcgcatcgat ataaaattcg
      481 ctgttgtaaa aaggatcgat ggttaccaaa cgcgatgcgt attgtttttt caaatggaca
      541 tccttcatgt ccgcaactgc ggtttcatag ctgctcattg catagtgagg atagagcggc
      601 aacagtacca cctcctcaag ctgcgggttg ttactgtgca atttttcgag gacgtcttca
      661 gaagaaggat ttccataacg catggatatt tccacgggct cttccacctg ctcctgcaat
      721 ttctcctgca gttgcctggt gagtacgatc aaaggtgatc cgtcttttgt ccaaattgat
      781 cgatacgcct ccgcagattt agccgccctg aaaggaacga tcatcccttt cacgatcagc
      841 gaccttacca ggtaaggcga gtcgatcacc cttttgtcca ttaaaaattc ggtgagatat
      901 ttttttacat ccttcacttc cgtggagtct ggagaaccga ggttcattaa aatgatcgct
      961 cttttgttcg tgttcatgca gcgccaaaat tatcggaata tgaccgaaag cattttttta
     1021 acaacggcac ttcgaaacat gacagataaa tgacaataga tgtgacattt atcatgtttc
     1081 tatgagtgct tgcaaatatt tttgcgccaa tggacatcaa taagctttgc atcgcaggga
     1141 tcaattacaa aaaggccgag gcagaaatgc gcggcttgtt tgctattgac aacgtgcagc
     1201 acggttccat actttctgcg gcaggcttct taggcatcaa tgagatcttc gttttgtcca
     1261 cctgtaaccg tactgagata tatgctattg ccgaagacag tgaggtgttg atcaacctcc
     1321 tgtgttctca aactgccggc gacgccgaaa ccttcaaaag gtctgcatac ataaaaaaag
     1381 gaaaggatgc tgttgagcat ttttttaatg taggcgcagg acttgattcg cagatattag
     1441 gcgattatga gatcgtgggt cagttaaaaa cagcggtcaa atttgcgaaa caaaacggaa
     1501 aaataggcgc gaacctcgag cggttggtca actccgtttt gcaggcatca aaattaatta
     1561 agaccaatac ccaactaagt ggtggtaccg tatctgtatc attcgctgca gttcagtaca
     1621 taaaaaatca tgtaaaaaat attcgcgaca aaaaaatatt gttgctgggg gttggaaaga
     1681 tcggaagtaa tacctgcaag aatcttgttg attatcttca tacgaacaac attacactga
     1741 tcaaccggtc ggaggaaaaa gctttcggcc ttgctgctga attgaacctg agatccgcct
     1801 ccattgatca gctggatact gaaataaaag cagccgatat catcctggtt gcaacaaacg
     1861 ccggcgaacc ggtaattatg gcgtctcatg tgaaagacgc cggcacgaag attatcatcg
     1921 acctttcgct tccgtgcaac gttgaagagt ctgcgcgttg ttttgaaaat attcaagtgg
     1981 tgaatgtgga cgaattgtca aagttgaaag acgaaacgct cgcgaaaaga caggcggaaa
     2041 ttccaaaagc aagggcgatc atcgcagaag ttatgcagga attttttgaa tggtatgaat
     2101 tacgccgcca tgtgcccgtt ctaaaagatc ttaaggtaaa gcttcgccaa attcattcgt
     2161 attcgatcat ccacacagac ccttcatatt ccctagaaac actggacata aaaattcagc
     2221 aggtattaaa tgaaactgcg ggcagaatga aaaccaccaa cctgaaaggt tgccactata
     2281 ttaccgcgat caatgaattt atgcgcacgg gttaattcat gtcaaaaatt ttacgcatcg
     2341 gtacaagaga cagccagttg gccgtatggc aggctacctg tgtgcagaac ctgctgaagc
     2401 aagcaggtgt tgattcagaa ctcgtttata taaaaagtga aggcgatgtt gatacgataa
     2461 cgcctttata tgcgctcggt gtccagggcg tattcaccag gacacttgat gcggctttac
     2521 ttaataacag gattgacatt gctgttcact cgatgaaaga tgtgcctgtt cagttggcga
     2581 atggagttcg gcaagccgca gttctgaaaa gaggttccca taaagacatc tttgtttaca
     2641 acgacaaaag ttctcttcaa gaattgggcg ttgtgaatgg tgaatggttg cccgctaacg
     2701 gcgctcatca ctcatcactc atcactcatg atttcatcat cgcgaccagc tcgacccgtc
     2761 gcatggctca atggctaaat cgttatccga atcacaggat tgagaacctg cgcggcaatg
     2821 tgaatacccg tttacgcaaa ttgaaagaaa gcaattggaa cggcgcgatc ttcgccgctg
     2881 caggactcga acgaatcgat ctcaggccgg aaaattccgt tgaattggat tggatgttgc
     2941 cagcgcccgc gcagggtgct atcatggtgg cgtgcaggca tgacgatccg ttttcattcg
     3001 acagttgcca gtcattcaac gacgagcaca cggctttatg tacaaagatc gaaagggact
     3061 ttttgaagga attgatggga ggatgttcaa cgccgatcgc tggtattgct gaaatgaaag
     3121 gaaacaacat cttattcagg ggaaatatat tgtcgccgga cggaaaggaa aaagttgaaa
     3181 cggtgctgtc ggtgccaaaa agcatggccg gggaactcgg gcaacaagca gccagagaca
     3241 tcctgcaaaa aggtggacaa ccgatccttg ataaattcaa aactgacgca aaataaaatt
     3301 acgatattat cgacgaggcc gatcgacgac gagttgatca acgaggcggc gaagcaaaac
     3361 ataaacatag aagtgttttc atttatcgca accgaaccga tcgacgacct ggatacatat
     3421 aatgaaattg aaattgcctt aaccgaaaca gcaactattg tttttacaag catgaatgcg
     3481 gtggacgccg ttgcctcgca tctcaatgaa ttcgggcccg actggaagat ctattgcatc
     3541 ggcaatgcaa cgaggaaatt ggtagcagaa cattttggag acaattcgat taccggaatg
     3601 gcaaacgacg caaccgagtt ggcccaaaaa ataatagacg acgatattga cgatgtgatt
     3661 ttcttctg
//
LOCUS       DASQJI010000347         3178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_653401,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000347 DASQJI010000000
VERSION     DASQJI010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653401"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VEV83_09715"
     CDS             complement(<1..250)
                     /locus_tag="VEV83_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate cyclase"
                     /protein_id="HYK45435.1"
                     /translation="MPQVRQLAAIMFTDIVGYTALMRDDERKAFHFRDTNRQLHKQVL
                     EEFNGRFIKELGDGILSSFQSVSDAVHAAIKIQEGAEGF"
     gene            complement(739..981)
                     /locus_tag="VEV83_09720"
     CDS             complement(739..981)
                     /locus_tag="VEV83_09720"
                     /inference="COORDINATES: protein motif:HMM:NF015630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0175 family protein"
                     /protein_id="HYK45436.1"
                     /translation="MKTLMLNIPDQVELKESEAKMILASQLYEQGKLSLGQAAELAGL
                     SKRSFMELLGDYGVSVFNYPASDLEKDVKNAENYHL"
     gene            complement(1091..2182)
                     /locus_tag="VEV83_09725"
     CDS             complement(1091..2182)
                     /locus_tag="VEV83_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45437.1"
                     /translation="MQQLQDNVENIHPTRKKPIFPVQEPLRAYLKKYAREVKLPADYS
                     DLMQFRYAVPLFDKTGKDTNWEIVKYDMREWEYLRESLVKMYAILKTEGDLSFINHLD
                     VARIDFCSFGNSQPFRIRIVNKFNDNYDHYYIKPADASRVYGLELEHLLSPNRIIFYT
                     HFNTLIEEHIPGIPGDDFIKRYRDNPDTNIIRLSKEFVKFNERCFVRLLGDMRSYNFV
                     VSITPDIEDVQYRIRAIDFDQQSYEGRKNLYLPQFFKENKVYVDMALKNLDKKSIAQY
                     QAEERTMMAVRVVGSRYRMKELLDIMYYDDISKPEKITQLKEELAAYFNQPLFLRCHN
                     MGQILKAQLKQTLNKSLSMIRKPGGTFDD"
     gene            2723..>3178
                     /locus_tag="VEV83_09730"
     CDS             2723..>3178
                     /locus_tag="VEV83_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HYK45438.1"
                     /translation="MQTQSFTLQVSDSIGNVSAEYITPDKSVAVMTLAHGAGAGMNQS
                     FMISLATSLAERGITTLRFNFPFTENKKGRPDFPPVAHKTIEVALAHASETFPSLPLF
                     ASGKSFGGRMSSQYLSTLPDTKVKGIIFYGFPLHPPKKPSIERAEHLKNV"
BASE COUNT          851 a          692 c          669 g          966 t
ORIGIN      
        1 gaaaaccttc tgcgccttcc tggatcttga tcgccgcatg caccgcatcc gacacgcttt
       61 gaaagctcga caatatgcca tcgcccaact ccttaatgaa cctgccgtta aattcttcca
      121 gcacctgttt gtgaagttgc cggttcgtgt cacggaagtg gaaagctttc cgttcgtcat
      181 ccctcattaa tgcagtgtaa ccgacgatat cggtgaacat gatcgcggcc aactgtcgaa
      241 cttgaggcat gaaaaatgga attgagatcg gaagtcaacc agagaataag aatagcgata
      301 tagcgattat tcctcgctca tttcgagtgc ttgctgaatt aattcatctg ttatccgaaa
      361 attggtttta acccatcctt ccaaaacagc ttttaaattt gttattagcc cttttctttt
      421 tgcttctatc aaaacaccta atgtacctgt gatgtttagt cctaatcctt ccgcaatttt
      481 acgagtttta aagtcatcga tgattatgag agaatcttta tactccaggg ctaatgcaat
      541 ggcggttgct tcgcctgcat cgacatttag ttgaagtgtt tgctgaatac tttttgtgaa
      601 ggatccaaaa tttcaacaaa agcaggtaat gattttccat attcttctgc aataattgtt
      661 gaaacagtaa tagttctaaa aagacttctt aaagtttcaa gttgattgat tttatcaaga
      721 gtaataaggc aactggtatc agagatgata attttccgca ttttttacat ctttttcaag
      781 atcgctggcc ggataattga aaaccgaaac gccataatca cccaataatt ccatgaatga
      841 acgtttagac aatccggcaa gttcagccgc ctggcccaaa gacaatttgc cctgttcata
      901 aagttgagaa gcaaggatca ttttcgcttc gctttccttt agctcaacct ggtcagggat
      961 atttagcatt agtgttttca tcttttaaaa ttataaaatt aatggcactc tctttacaat
     1021 cttaccctga aaaaattatt tattgcgata cttttaatgg ttaccaatat ttcgattgta
     1081 ctaaatatca tcaatcatcg aatgttcctc ccggcttgcg tatcattgaa agacttttgt
     1141 tgagtgtttg ttttaattgt gctttcaata tttggcccat gttgtggcag cgcaaaaaaa
     1201 gcggctggtt gaaatatgcc gcaagctctt ctttcaactg cgttattttt tcaggttttg
     1261 agatgtcgtc gtagtacata atgtccagta attctttcat acggtagcgg ctgcccacca
     1321 cgcgcacggc catcatcgtt ctttcttctg cctggtattg tgcaatgctt tttttgtcga
     1381 ggttcttcaa tgccatatcc acatacactt tgttctcttt aaaaaactgc ggcaggtata
     1441 aattttttct tccttcgtag ctctgctggt caaaatcgat cgccctgatg cggtactgaa
     1501 catcttcaat gtcgggggtg atacttacca caaaattgta actgcgcata tcgccgagca
     1561 gccgaacgaa gcaccgttca ttgaatttga cgaactcttt cgacaggcga ataatatttg
     1621 tatcgggatt gtcgcggtag cgtttaataa aatcatcgcc cggtatgccg ggtatgtgtt
     1681 cctcgatcag tgtattaaag tgggtataaa aaatgatccg gtttggcgat agcaagtgtt
     1741 cgagttccaa accataaacg cggctggcat ctgcgggctt gatgtaatag tgatcgtaat
     1801 tatcattgaa cttgtttacg atcctgattc gaaacggttg actgttccca aaactgcaga
     1861 agtcaatgcg cgcaacgtcc aggtgattga taaaacttag atcgccttcg gtttttaaaa
     1921 tcgcgtacat cttcacgaga ctttcacgca aatattccca ttcacgcatg tcgtacttta
     1981 caatttccca attggtgtct tttcctgttt tatcgaacag gggaacggca taccggaatt
     2041 gcatgagatc gctataatcg gcaggcagtt ttacttctct tgcatatttt tttagatagg
     2101 cgcgcagagg ttcctgcacc gggaaaatcg gtttcttccg cgttggatgg atattctcaa
     2161 cattatcctg gagttgttgc atgggaatgg tatcgcaaat tagtacttaa aaggctgtat
     2221 tattagatgg acaatggccg cgtcagttag gccggaagat tgggcatgat gccaaaaagg
     2281 ttgtgtttat ttcttgctga atcaacggct acacgggccg atggaaagag caggttcgcg
     2341 ccttcgggaa tgacgtccac tggatcaaga taatgcttac acggtcacag gcaaggtaat
     2401 gcgcaagcta atcgaacgtc atgcccggct cgaccggcca tctcattatc gaaagcgcga
     2461 gaatgaatct tttcgatttt ggacgttacc tattagacaa aagataatta gtacctgcat
     2521 tatcgcgacc cttgcaatta tgagattccc gccttcgcgg gaatgacgtt ttcaggatgg
     2581 acgattgtat agtccggaaa taggttgaca caaaagatgt ggataagtca actaaacgtt
     2641 tccaggatga acgatcgctc ttcgtagcat gatggcgccc attcataaca atgcagtaaa
     2701 ttgaaacgaa aattggaaac gcatgcaaac gcaatctttc acgctccagg tttccgactc
     2761 tattggtaat gtctctgccg aatacatcac tccggacaag tctgttgctg tcatgacgct
     2821 tgcccatggc gcgggcgccg gcatgaacca atcgtttatg atctcacttg cgacatcatt
     2881 ggcagaacgc gggatcacta ctttacgatt taattttcca tttactgaaa acaagaaagg
     2941 acggcccgat tttccgccgg ttgcgcacaa aacaattgag gtagctcttg cgcatgctag
     3001 cgaaacgttt ccgtcattgc cgctttttgc ttctggcaaa tcattcggtg gacgcatgag
     3061 ctcgcaatat ttatcgacgc tgccagacac gaaagttaag ggcataattt tttatggctt
     3121 tccgcttcat cctccgaaaa aaccttccat tgagcgcgcg gaacatttga agaacgta
//
LOCUS       DASQJI010000348         1896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1423080,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000348 DASQJI010000000
VERSION     DASQJI010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1423080"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1845
                     /locus_tag="VEV83_09735"
     CDS             <1..1845
                     /locus_tag="VEV83_09735"
                     /inference="COORDINATES: protein motif:HMM:NF039201.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45439.1"
                     /translation="VGNIYQKSKNKGLYKSIDGGTTWTKILYISDSTSVNDVAVSSVN
                     AKMLLATTWERISRPGVRVYGGVTSNLYQSIDGGAHWTKLLADDANRGKLTVEIPPSN
                     PNIAYVSVANKNGTFDNIYKYNGSTFTAISNGVSGGTAYTWWFGGLKCHPTDSNTVYY
                     SDFNLYRTTNGGTSWQQVAAGSHVDHHAVFVHPVNTQKVVIGNDGGVYTSTNALSGIT
                     FRSLPNSQIYDMDLYKADETFLSVAMQDNSFAHTSTQTLNGWAPFGGGDGVEVRVNPV
                     NKNETYSTQYGSLNITTNGISFNDRFNWRCPIRLDPVNPNVRYFGTNKLYKYNPSQTI
                     WNAISGDLTKGSGTGNFGTITTIAISPSNNNYIYTGSDDGQVYVTKNGGANWTRITAG
                     LPVFWTTFIKTDLTNPEIAYVGFSGYRYGFKDAHIYKTTNAGTTWTRISNDLPQIPVN
                     DLEIDPLNANTLYLGTDIGVYYSTNAGTNWVRLGKRMPHTVVSTLNFAANSRQLYAAT
                     YGRSAFKIDLSALLPATNTTIAENKNAILSISPNPARDYATIRLSENKHGGVINVYSN
                     NGELKFSGKLQPNVLQQNISLQNLNGGIYTVVCAIGDDKLSAKLFVEK"
BASE COUNT          554 a          414 c          460 g          468 t
ORIGIN      
        1 gttggaaaca tttatcagaa gagcaagaac aaaggtttgt ataaatcgat cgacggcggc
       61 acgacgtgga cgaagatctt atatatttcg gattcaacat cagtaaatga tgttgcagta
      121 agttccgtca atgcaaagat gttgcttgct acaacctggg aaagaatttc gaggcccggc
      181 gtgagagttt atggaggtgt cacttctaac ctgtatcaat caatcgacgg aggcgcccat
      241 tggactaaat tacttgcaga tgatgcgaac cgcggaaagc ttactgtcga gatcccgcct
      301 tcgaatccga atattgcgta cgtaagtgtt gccaacaaga acggcacttt cgacaacatc
      361 tacaaataca atggctcaac atttacggca atttcaaatg gagtctctgg tggcactgca
      421 tacacctggt ggtttggtgg cttgaaatgc catcccaccg attcaaacac agtatactac
      481 agcgacttta acttatatcg tacgacgaat ggcggtacca gttggcagca agttgcggca
      541 ggctcgcatg ttgatcatca cgcagttttt gttcacccgg tcaatacgca aaaagtagtg
      601 atcgggaatg acggcggcgt gtatacttcg acgaacgcat tatcgggtat cacttttcgc
      661 agtcttccaa actcgcagat ctatgacatg gatctgtata aagcggatga aactttcctg
      721 agcgttgcga tgcaggacaa cagttttgca catacatcaa cgcaaacgtt aaacgggtgg
      781 gctccgtttg gcggaggtga tggggtggaa gtaagagtca accccgtgaa taagaatgaa
      841 acttattcca cgcagtatgg gagtttaaat atcacgacga acggcatttc cttcaacgac
      901 cggtttaatt ggcgttgccc gatccggctt gatcccgtta atccgaacgt gaggtatttt
      961 ggcacgaaca agttatacaa atacaatccg tcacagacta tttggaatgc gatcagcggt
     1021 gatctcacta aaggaagcgg aacgggcaac tttgggacta tcacaacgat cgctatttcg
     1081 ccatcgaaca acaattacat ctatactggc agtgacgatg ggcaggtgta tgtaacgaag
     1141 aacggcggcg cgaactggac gaggatcaca gcaggccttc cggtgttttg gaccacattt
     1201 atcaaaaccg acttgacaaa ccctgaaatt gcatacgtcg gtttcagcgg ctaccggtac
     1261 ggctttaaag atgcgcacat ttataaaacg acgaatgcag gcacaacgtg gacgaggatc
     1321 tcaaatgatc ttccgcaaat tcctgtcaac gatctcgaga tcgacccgct aaatgcaaac
     1381 acgttatatc ttgggactga tattggggtt tactacagca ccaacgctgg cacgaactgg
     1441 gtgaggcttg gaaagagaat gccacacacg gttgtttcca ctctaaactt cgcagctaat
     1501 tcaagacaat tgtatgctgc cacgtatggc cgaagtgctt tcaaaattga cttgtcggca
     1561 ttgttaccgg caaccaatac tacgatcgct gaaaataaaa acgcgatcct ttccatttcg
     1621 ccgaatccgg caagggacta cgcgacgatt cggctgagcg aaaataaaca cggaggagtg
     1681 atcaatgtat acagcaataa tggggagttg aaattttcag ggaaactgca gccaaatgtg
     1741 ttacaacaaa acatcagttt gcagaacttg aatggaggaa tttacaccgt ggtctgcgcg
     1801 atcggtgatg ataaattgag cgcgaagttg tttgtggaaa aataggtcag ttatctgtct
     1861 ttcaattttt ttctcacaga tagcacagat gatgca
//
LOCUS       DASQJI010000349        16143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1575600,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000349 DASQJI010000000
VERSION     DASQJI010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 16143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16143
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575600"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VEV83_09740"
     CDS             <1..394
                     /locus_tag="VEV83_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYK45440.1"
                     /translation="DGSEHIVAFALDGFFITDLYSFLTQETSTYNIDAIEDSELVLIT
                     RSASDELRKLSSKYQEFILWETSKAYIQLERRITSSISLGLEERYQNLITYYPDIIHH
                     VPQHMIASYMGLTPETLSRIRKRISIHK"
     gene            539..1135
                     /locus_tag="VEV83_09745"
     CDS             539..1135
                     /locus_tag="VEV83_09745"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HYK45441.1"
                     /translation="MNTIKNGIKNWWWFLIMGIASLVAGAAIFAKPAESYITLSVLFS
                     IIMASTGFSQIVFSISERRYLKNWGWTLVSGILDFALGTYLMIYPAITMATLPFIVGF
                     YLLFRAIYLIGASIELSSIGIKGWGWLLTGGVVLLALGFLTLYYPAVGAIGIVACSGY
                     AFIVSGIFSIVLAFQLKSFKARIPHFENDLQKSLGIVL"
     gene            1294..2127
                     /locus_tag="VEV83_09750"
     CDS             1294..2127
                     /locus_tag="VEV83_09750"
                     /inference="COORDINATES: protein motif:HMM:NF018590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HYK45442.1"
                     /translation="MEKMLVAVFDSETKAFEGVSALKDLHNNGDITLYANAVVTVDAN
                     GKLKVQQTADEGPVGTATGLFIGSLFGLLGGPVGLAIGAGAGAIAGLTFDASNDSINT
                     QFVDEVAGKLTKGKSAVIADIDETWTVPADTRLEELDGIVFRRLRYEVEDDQLRRESE
                     AIVAEYNEWKEEMKEGFDADKAKINKGLSNAKEKAQMTDQQIQHKLNEIDDELNVKLD
                     KIELQMTHAADKRKARLQKRINAVKEDYRIRTEKLKQASRLINEAFAAKKENALAETV
                     A"
     gene            2194..2547
                     /locus_tag="VEV83_09755"
     CDS             2194..2547
                     /locus_tag="VEV83_09755"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK45443.1"
                     /translation="MNTALWIVQGMLGAMMFILGMMKTFMPVQKLNKLSWTTRNANSF
                     IRFVGVSELLIGLGLILPQLTGLLRLLTPIAAASLAVIMILAIAEHLRHHETHDISKN
                     VIIMLFAVFVAVGRF"
     gene            complement(2661..3203)
                     /locus_tag="VEV83_09760"
     CDS             complement(2661..3203)
                     /locus_tag="VEV83_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45444.1"
                     /translation="MGIDKIVHFVHFETLLSGDDFLTRWEHYKRSANIDENVILQESK
                     KGNVFSYLAQHRCNSYEFKFTFTKGAKLTRAKQAEIKTKQLGGYSIIQLENPGNAKRD
                     DYKLFIFIDNALPDLAVYKDLHPSGKLNIYKAYFENCSYSYILEYFMKSKDIPAFQEN
                     LHKFNASAPAVYKELVQQYS"
     gene            complement(3305..3475)
                     /locus_tag="VEV83_09765"
     CDS             complement(3305..3475)
                     /locus_tag="VEV83_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45445.1"
                     /translation="MYSKFFKHSDLDELEQRLDDFLQELEEVTGRITNLEIFQGDEEI
                     IVLVIYISWKKI"
     gene            3722..4036
                     /locus_tag="VEV83_09770"
     CDS             3722..4036
                     /locus_tag="VEV83_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45446.1"
                     /translation="MLKYNSEEIFNPERFPEMKGELSSLIQKTENTPRYFKAEIIISY
                     FKSHCIKSEWIRVNPELVSSLLAGNFITRHIESLFDWCRLKPVYLRAYENYIKDTVET
                     RR"
     gene            4123..4539
                     /locus_tag="VEV83_09775"
     CDS             4123..4539
                     /locus_tag="VEV83_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45447.1"
                     /translation="MFEINFKTNQFLGAWKKYSQVIRILMKKSVRETQVLNLNRSDFE
                     RDAKRKYGHKFVVEFINGKPAMIIAGREIVQSFTQALLSDEVTRELLLKHNYTFALTT
                     KYQLEIKMTDTVLENVGAEAEEENKDPEEDLTLQVV"
     gene            complement(4604..4885)
                     /locus_tag="VEV83_09780"
     CDS             complement(4604..4885)
                     /locus_tag="VEV83_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK45448.1"
                     /translation="MNIYVSNLGFHVGDEDLKGFFATYGAVSSAKVIMDRETNRSKGF
                     GFVEMPDESEGNTAINKLNGFVVEGRSLVVNIAKPKERPAFKRADNFWK"
     gene            5322..5519
                     /locus_tag="VEV83_09785"
     CDS             5322..5519
                     /locus_tag="VEV83_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45449.1"
                     /translation="MESVQLGDLVKHKTIAWMNDEKPFRVISIENGKATCEYTGRNGM
                     QYFHDFDIDQLKIIKTAFELT"
     gene            5920..7473
                     /locus_tag="VEV83_09790"
     CDS             5920..7473
                     /locus_tag="VEV83_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45450.1"
                     /translation="MGKLKIGVIDLVSKGPTNTLWSKIMHANLASIMPTVVATWCKQE
                     GHDVNMICYTGHEDLSKELPKNVDVVFICAFTQAALLAYALSNYFRSIGAVTVLGGPH
                     ARCYPDDAKKYFDYVLGFTHKSTIVEVLENCTPQKQEGVCLSARKQPLELPGVIERWE
                     FIEPTLKKAPFLKMVPMIGSMGCPYTCSFCIDSVVPYQPLDFDTMQKDLRFLLTKYKS
                     PIVVWHDPNFGIRFEENMHAIASAAPPKSFRFIAESSLSILTEQHLKEMQQNGFGAML
                     PGIESWYELGNKSRTSHMAGEEKLNRISEHVNMMFKYIPYVQTNFVLGMDTDEGPEPF
                     ELTKKFVDRSPAAFPGYSLLSAFGEAAPQNLEYQKTGRVLPFPFYFLNNHLAMNIKPR
                     NYEWVDFYEKVIDVTAYSFSKRSLYRRFKATPSFTSRWMNFMRAVSSEGYGRLKFYHQ
                     VKKNLIEDTNFRDYFEGTSSRLPDFYTNIIRQSLGVWWEWLPAGAMEHDPNAYLKKQF
                     KKNLVATST"
     gene            complement(8040..8270)
                     /locus_tag="VEV83_09795"
     CDS             complement(8040..8270)
                     /locus_tag="VEV83_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45451.1"
                     /translation="MTIYNDAALNELIRAGKDATIELSMIKAKAKNLRVKELLTYRRS
                     QLNFIRKRLRELNLTEKDFDDIHSYVIEKSIS"
     gene            complement(8308..9534)
                     /locus_tag="VEV83_09800"
     CDS             complement(8308..9534)
                     /locus_tag="VEV83_09800"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HYK45452.1"
                     /translation="MDFKDLQLSAPLIKALQHEGYTEPTPIQQKAIPVILQQQDLLGC
                     AQTGTGKTAAFALPILQLLGSKKEGSRAGRQIKALVLTPTRELAVQIEESFSAYGRYA
                     GLKQAAVFGGVPQYSQVKKLREGLDILIATPGRLLDLVMQGHVSLRHIEIFVLDEADR
                     MLDMGFITDVKKVISKLPQQKQTLFFSATMPPEIAHLSKTILNHPVRIEVTPVASTAE
                     KVEQAIYFVERENKRALLLHLLTGDEITNALIFTGTKFGADKLCYALQKANIKVQSIH
                     GDKSQVQRQNALDDFKNRKIQVLVATDIAARGIDIDNLSHVINFELPNIAETYVHRIG
                     RTGRAGLSGKAISFCGMEEKALLRDIHKLTNQSIPVVKDHPYEMEGAGLSLPGKPSLS
                     FAAVGNRRRHKVFNQR"
     gene            complement(9551..9799)
                     /locus_tag="VEV83_09805"
     CDS             complement(9551..9799)
                     /locus_tag="VEV83_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45453.1"
                     /translation="MATSKPGFYILLPGNHHSHPFISARTPGEGKRELRLNNDIRRTL
                     TNKYCLHIENNKPAKEVAQLAPKKEGRQNNRHARHAYH"
     gene            complement(9815..10117)
                     /locus_tag="VEV83_09810"
     CDS             complement(9815..10117)
                     /locus_tag="VEV83_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK45454.1"
                     /translation="MKMYVSNLSFHTTEEILKDLFSKYGEVDSVKIITDRETNRPRGF
                     AFVEMNSEEQANEAMAGLNNKEIEGRMLSVSVARERENRSYGDKPFQRRNNHKNFF"
     gene            10540..11568
                     /locus_tag="VEV83_09815"
     CDS             10540..11568
                     /locus_tag="VEV83_09815"
                     /inference="COORDINATES: protein motif:HMM:NF014696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HYK45455.1"
                     /translation="MAGKQPAVEKLEHLVNKKPELKSALTAAIKEADEKGIETLPRFY
                     NFLNGLLTRIPTDEEFNSSTEKFWHILNKSPNETLKTSDVFNEWIREFIMSMGRYMDS
                     TESAKGIESFLKDRKNKIEEYFAPPGGWLTYNLFLARQVKPGKRPVDNRCDDDIIVSP
                     TDSVYLGKWEMKDDATITVKGDTYDINDLLAGSRYQRRFKGGLFTHLYLSVNDYHRYH
                     MPVSGKVVEVKNIPGRTWVNMVEKLTGKEAVDDIGFQFNQTRGYIIIKTKNIGFVAVV
                     PVGMGFVSSVTITVDEGTTLAKGDEFGFFAYGGSDIIMLFEPDTIKFTAFARKHYLQG
                     QKIAKAIK"
     gene            12196..13125
                     /locus_tag="VEV83_09820"
     CDS             12196..13125
                     /locus_tag="VEV83_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bZIP transcription factor"
                     /protein_id="HYK45456.1"
                     /translation="MKTNLAFIAAVITVSAAISVQQANAQNIFPDSGRVGIGTRTPTA
                     QLDVNSTATGQIARFNGGSSSMYVSLLEGGVYRGYIGSYAGNNEDVDFGTGSSTSGKL
                     HLTIKAVPKLTIDNTGRVGIGTVSPVARMEIYHNSSVSNPQLLLYESANDYARLSFQN
                     TATTSYFSIAGLPATATAASKLNFYYSAFGDIMTVQGNGHVGILTTNPQYQLSVNGTI
                     QAKEVRVESGWADYVFDKEYKLTSLEELEQYITTNKHLPGVAPAAEVQKDGMKVGEMN
                     KAMMEKIEELTLYVIQLGKENKQLKSEIEALKK"
     gene            13155..15467
                     /locus_tag="VEV83_09825"
     CDS             13155..15467
                     /locus_tag="VEV83_09825"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HYK45457.1"
                     /translation="MKKIIHYIAQSIRPPVALLLALLLIEGSVAAQDNERLSPAFDKI
                     AKPQSTRGWIYFWENYKANPLTVFDDLKGAFELSNDDKMMLIKTIKDDVGFTHYRYQQ
                     YYKSYPVLFGEYIVHQQPDGFVNTANGRLITGLKTGNTTTISEKQALEAALRFMGASK
                     YLWQNPAMEKELKRQEKNDKATYLPKGELMYAPDNFNETYKASDYKLAWHFTIYTDDA
                     NVKAKNVYVDANTGRIIYFADIAMNCSGATGTSAYNGSVSFSTEFTGSNYRSHNNCQA
                     TDIYVYNCNRGGASNTFYTDGDNSWTNQSATQAQWGALKTYDYYLGTHSRTSWDNSAG
                     DLIAYNNAVYGNPPTANNACWGCTGNSAIFGAGTTTSATDDWNTDDIMGHEFTHGVTQ
                     SEAGLVYNKESGALNESFSDIFGEMVESWSEGNCDYLVGADRGAIRSFINPNSYGDPD
                     TYLGTNWYTTSGCTPSSDNDNCGVHTNSGVQNRWFYLLAEGGSGVNDLGKSYNVTGIT
                     RFEARQIAYRALSVYLTSSSKYIDARKASLQAAWDIYGQCSPEIIAVGDAWHAVGVES
                     QSPAYSFNVCGTYPASGTVEQAISLLTASSTGCTTEITASSSTVYFTARDRVILYPGF
                     KADAGSNFVAYLEPCSSTRWRTGRPDAPKSEEEKRGQTPVAVTANTQTTEEGDAMNTA
                     NALAAGGISVGPNPFTSNIIISVNAKRDGKADVSVYNAVGKKLKEQIGINISEGLNKI
                     TFNAADLSQGIYMLEINVDGTKTVKKIVKL"
     gene            15915..>16143
                     /locus_tag="VEV83_09830"
     CDS             15915..>16143
                     /locus_tag="VEV83_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45458.1"
                     /translation="MMGSIDAAAQFPPGTNVDESKVPPYVLPDPLVMSNGKRVKDTTD
                     WYAVQRPYIYHLFEQNVYGRYPTQPVTVHFKI"
BASE COUNT         4833 a         3258 c         3424 g         4628 t
ORIGIN      
        1 ggacggctca gagcatatag tggcatttgc gctggatgga ttcttcatca ccgatctgta
       61 cagctttctg acacaggaaa cttccacgta taatattgat gcaattgaag attcagaact
      121 cgttcttatc acaagatctg cgagtgatga attgcgaaag ctttcttcaa aataccagga
      181 gttcatattg tgggaaacat ctaaggcata catacaactc gaaagaagaa taacgtcgtc
      241 tattagcctt ggtttagaag agcggtatca aaacctgata acttattacc ctgacatcat
      301 tcatcatgta cctcagcaca tgatcgcttc atacatgggt cttacacctg aaacacttag
      361 ccgtatccgc aagagaattt ccattcacaa gtaagcaatg cgttgattga aatcaagact
      421 tttcttgatt gcgcgcattg gacaccggca tcgcgcaggc gtagctttgt gctgttatta
      481 aaacaaaaaa tactcttatt attcattcat tttaaaatta gaaattatgt caactgttgt
      541 gaacacaatc aaaaacggga ttaaaaactg gtggtggttt ttaatcatgg gtatcgcgag
      601 ccttgttgcg ggtgcagcga tttttgcaaa acctgccgaa agctatataa ccttaagtgt
      661 gctcttcagc attattatgg caagcacagg tttcagccaa attgtttttt cgatttcaga
      721 aaggcgctac ctaaaaaatt ggggctggac tttagtatca ggcattttag attttgctct
      781 cggtacttat ttaatgatct acccggctat caccatggct acgcttcctt ttatcgttgg
      841 cttttatctc ctgtttagag ctatttatct tatcggcgca tcaatcgagt taagttctat
      901 tggtatcaaa ggctgggggt ggcttttaac aggtggggtt gtattgcttg ccctgggttt
      961 tctcactttg tattatccgg cagtcggtgc gattggtatc gtagcatgtt caggttatgc
     1021 cttcattgta agcggcattt ttagtatagt gctcgcattc cagttgaaga gtttcaaagc
     1081 gcgcatacca cacttcgaaa acgatcttca aaaaagtctt ggtatcgttc tttgaagtgg
     1141 cgaaaccgtt gtcgatcacc aaggttaatt aaggcgggag aattgaaatc aatgaaaaag
     1201 gaaaagaaaa agtaattatt gcccgaagcg gttttgcggg cgcaattaaa tcttgaatag
     1261 gaaactaatt attcacaata aaaacaaaat aaaatggaaa aaatgttagt agccgttttc
     1321 gacagcgaaa caaaagcttt cgaaggagta agtgccttaa aggacttaca caacaatggc
     1381 gacatcacct tgtatgcaaa cgctgttgta accgttgatg caaacggtaa attaaaggtt
     1441 caacaaactg cggacgaggg tcctgttggt acagcgacgg gcttgtttat tggcagcttg
     1501 tttggtctgc ttggcggtcc tgtagggtta gcgattggcg caggtgcggg cgctattgcg
     1561 ggacttactt ttgatgcaag caatgacagt ataaatactc agtttgttga tgaagtggca
     1621 ggtaaactca caaaagggaa atctgccgtt attgccgata ttgacgaaac atggacggtg
     1681 cccgcagaca cgaggcttga agaactggac ggcatagtat tccgccgtct tcgttacgag
     1741 gtagaagatg atcagttaag gcgtgagtct gaagcaatcg tggcagagta caatgagtgg
     1801 aaagaagaaa tgaaagaagg ctttgatgcc gacaaagcaa agatcaacaa gggcctttcg
     1861 aatgcgaaag aaaaagcaca aatgaccgac caacagatcc agcacaagct caatgaaatt
     1921 gacgatgagc tgaatgtcaa gctcgacaaa atcgaactgc agatgacaca tgcggccgat
     1981 aaaagaaaag cacgtttgca gaagcgaatc aacgcagtga aagaagatta tagaataaga
     2041 acagaaaaat tgaaacaggc gtcaagattg atcaatgagg ctttcgctgc aaaaaaagaa
     2101 aatgcattag ccgaaacggt tgcatagcca ataatcaaaa agggaaagat attaactgtc
     2161 ttttcctttt tttctgaatc aataattttt gtgatgaaca cagcactttg gatagtacag
     2221 ggaatgttag gagcaatgat gttcattctc ggaatgatga aaacttttat gcccgtccag
     2281 aagcttaaca agctgtcatg gacaacacga aatgcgaaca gctttatcag gtttgtggga
     2341 gtttcggaat tgctgatagg tttagggctc attcttcccc agctcacagg cctgttacgt
     2401 cttctcactc cgattgcggc ggcgtcatta gccgtaatta tgatacttgc aatcgcagaa
     2461 catttgcgcc accatgagac acacgatatt tcgaagaatg taattattat gctgtttgca
     2521 gtatttgtgg ctgttggaag gttttaagac caggtggatg cgcgaatgaa taaatagcaa
     2581 tggtaaaaac gttgctgagc aaaacggtct gcgcatggac ggctttcggg aggaaagccg
     2641 ttcagagatg ataattgaac ctaactatat tgttgtacta attctttata aacagccggc
     2701 gcacttgcat tgaatttatg taaattttcc tggaatgcag gtatgtcttt ggacttcata
     2761 aaatactcaa gtatgtacga ataggaacag ttttcaaaat aagctttata gatgtttaat
     2821 ttgccggaag ggtggaggtc tttataaact gcaagatcag gcaaagcgtt atcaatgaaa
     2881 ataaataatt tatagtcgtc tctttttgca ttacccggat tttccaactg tataatcgag
     2941 tagccgccca actgttttgt ttttatttct gcctgttttg cacgagtaag cttggcgccc
     3001 ttggtgaacg taaatttgaa ctcgtacgaa ttgcagcgat gctgcgcaag gtatgaaaac
     3061 acgttacctt tttttgattc ctgcaagata acgttctcat caatgtttgc cgatctcttg
     3121 tagtgttccc acctggtaag aaaatcgtca ccactaagta gtgtttcaaa gtgaacaaaa
     3181 tgtacaatct tatctattcc catgtaaata aaaatgttta gtttaattac ttcttgaacc
     3241 cttattagaa ctggtgcaat aataccaatg atttccgttt aaatcaaacg gtaaaactgc
     3301 ctgattatat tttcttccag gagatgtaaa ttacgagtac aataatttct tcatcaccct
     3361 gaaatatttc aaggttggtg attcgccctg taacttcttc aagctcttgt aagaaatcgt
     3421 ccagcctttg ttccagctcg tcaagatcag aatgtttaaa aaatttacta tacatgggtt
     3481 gcttaaaatt ttcctaccgc ggtttaatgc ttatttattt tacagctaaa gcaacctgct
     3541 atagatcatt ttgcacattt gatccttgtt gtgtaatgta ctgctttata gcaagatttc
     3601 acttttttag agagtaatat taaactgaaa cctgaaagat taacatatag tcgcctgatt
     3661 aaagattata ttacatgcga ttgccacgca atagggcaca ccaactaagg cacatacatt
     3721 tatgctcaag tacaacagcg aagaaatctt taatcctgaa agatttcctg aaatgaaagg
     3781 agaattatct tctcttatcc aaaagacgga aaatacaccc aggtatttca aggctgaaat
     3841 aattatttct tacttcaaga gccattgtat taaaagtgaa tggatacgag tgaatcctga
     3901 gcttgtaagt tctctacttg ccgggaattt tattacccga cacatagaat cgctattcga
     3961 ctggtgtcgc ttaaagcccg tttacctgcg cgcctatgaa aattatataa aggacaccgt
     4021 ggaaacaagg cgataaatat taccagggac cgccgttaag tagtgtcgct aaagcaagaa
     4081 ccggtctgac gtctatacaa ataactaaaa aagatcaact ttatgtttga gatcaacttt
     4141 aaaacaaacc aatttcttgg tgcatggaaa aagtattcgc aggtcattag aattttgatg
     4201 aaaaaatctg tgagggaaac gcaagtgctc aatctcaacc gcagcgattt tgaaagggat
     4261 gctaagagaa agtatggaca caaattcgtt gtcgagttca ttaatggaaa gccggctatg
     4321 attattgcgg gacgtgaaat tgttcaatcg tttacgcagg cattattaag tgacgaagta
     4381 acgcgcgaat tgttactaaa gcacaattac acttttgcgt tgacaaccaa ataccagctt
     4441 gaaataaaaa tgaccgatac cgtgttggaa aatgtgggtg ctgaagctga ggaagaaaac
     4501 aaagatccag aagaggatct gacgttacag gtggtttagg ctgtaatgaa gaaaagagag
     4561 tggttagctc tcttttatca aaattatttc cagtttatcg aaattatttc cagaaattat
     4621 cggctctttt gaaagccggt ctttcttttg gcttcgcgat gttaacaacc aaagatctgc
     4681 cttcaacaac aaacccgttt aacttgttta ttgccgtatt tccttcggat tcatctggca
     4741 tttcaacaaa accaaagcct ttgcttctat ttgtttccct gtccatgatt acttttgctg
     4801 aagatactgc accataggtt gcaaaaaagc cctttaaatc ttcgtctcca acgtggaaac
     4861 ccagattcga aacataaatg ttcatttttc ttgattgatt aattaaaaat tatttgagga
     4921 aggacaatgt aaaaaaagaa aggctgtgtg cagtgttact gttgcagaga tccgatcaat
     4981 acgtattgta ataactcaaa cgtgagagcg gaaggtacac cattaattcc gaaattaaga
     5041 tttcgatgag taattgtttg ttaatacgaa ggataaaatg ttaccccgcg gccacagcag
     5101 taagtgataa gcagactggc ttcgcttttc taacagccat gccaatgaag acgtaacccg
     5161 gcctaatcga tgggtacatt tttgatattg gctacggtgc ttacttctgt attttattgc
     5221 ttaaagtaaa agcgcactgt ttggaataac ggtggcaaca cggtttaatt aacaaaacga
     5281 gctgtcgctt aaaaactaac ttacacaaat aaacttcttt tatggaatcg gtgcagctcg
     5341 gagacctcgt aaaacataaa acgattgcgt ggatgaatga tgaaaaacct tttcgcgtga
     5401 tcagcattga aaatggtaaa gcgacctgcg aatatacagg gcgcaatggc atgcagtatt
     5461 ttcatgactt cgatatagac caattgaaga tcataaaaac agctttcgaa ctaacgtgaa
     5521 aacccggctt gcactgccgc atgtgcgtgt ttaatttttt gattgccgat tttcttctgc
     5581 aaagagttat caagagatgc aatgaccgtt ttccttcgtc ctcgtcccct gccatgaaaa
     5641 tgcacactca tatattctaa tcctgcattc aaacacacgt catgcctcta cagctcgctt
     5701 gtcagcgacc agcgctaaaa tttggtcacg gctcgttttt ttttcagcaa cctagacgcg
     5761 acggtcacat cttgaggggt gtagtatcag ttctaaaaaa acagatccct tcttaaagaa
     5821 cggttttatt actaaaaatt gatatcttca tataactcca tgttcgggat gaatgcgccc
     5881 ctgcatttgt tacgaatttg gatgacttac ctctaaataa tgggaaaatt aaaaattggg
     5941 gtgatagacc ttgtaagcaa aggtcccact aatacattat ggtcgaaaat tatgcacgcc
     6001 aacctggcaa gcataatgcc tacagttgta gccacctggt gcaaacagga agggcatgat
     6061 gtaaacatga tctgttatac aggacatgaa gacctgtcaa aagagttacc aaaaaatgtc
     6121 gatgtagttt ttatttgtgc ctttacacag gctgccttat tagcttatgc gttgagtaat
     6181 tatttcagaa gcatcggggc ggtaacagtg ctgggcggcc ctcatgcaag atgctacccg
     6241 gatgatgcaa agaaatattt cgattatgtt cttggcttca ctcataaatc aaccattgtt
     6301 gaagtgctcg aaaattgcac gccacaaaaa caggaaggtg tatgtttgtc cgcccgaaaa
     6361 caaccattgg aattgccggg cgttatagaa cgctgggagt ttattgaacc cactttaaaa
     6421 aaagcaccgt tcctgaaaat ggttccgatg atcggaagca tgggttgccc ttatacttgt
     6481 tctttctgta tagattcggt tgtaccttat cagccgcttg attttgacac catgcaaaaa
     6541 gatcttcgct ttttgcttac aaaatataaa agcccgatcg tcgtatggca tgatcccaat
     6601 ttcgggataa gatttgaaga aaatatgcat gcgattgcat ctgctgctcc tcctaaaagc
     6661 ttccgtttta ttgccgaaag cagtttatca attctgactg aacagcattt aaaagaaatg
     6721 caacaaaacg gttttggagc aatgttacca gggatagaat catggtatga gctgggtaat
     6781 aaatcgcgca cttcgcacat ggcaggtgaa gaaaaattaa acaggatatc ggaacacgtg
     6841 aatatgatgt ttaagtacat accttacgtg caaactaatt ttgttttagg aatggatacc
     6901 gacgaaggtc cggaaccatt tgaattgacg aagaagtttg ttgatcggtc tcccgctgcc
     6961 tttccgggtt attctttgtt aagcgcgttc ggtgaagcag cacctcaaaa cctggagtac
     7021 cagaaaacag gcagggtttt gcctttcccg ttttattttt taaataacca tctcgcgatg
     7081 aatataaagc ccaggaatta tgaatgggta gatttttatg agaaagtgat tgacgttact
     7141 gcttattctt tttcgaaaag atcattatac cggcgtttta aagccacgcc aagttttact
     7201 tcgcggtgga tgaattttat gagagccgtt tcctctgaag gatatggacg cttgaaattt
     7261 tatcaccagg taaagaaaaa tcttattgag gatacaaact tcagggatta ttttgaagga
     7321 acatcttcaa ggcttcctga tttttacacg aacattatca ggcaatcttt aggagtgtgg
     7381 tgggaatggt tgcctgccgg cgctatggaa cacgatccta acgcttacct taagaaacag
     7441 ttcaaaaaga atcttgtcgc gacttccaca taaattttct gcgttataat gcgcttccaa
     7501 aaagtgtttt tgataagatg agcttccatt cgagtcccat gaaccgatat gttatgcatg
     7561 ctttgtcatc aaacatctct gatgaatttg tttgatagcg gtatctacaa gtttatttca
     7621 tgacgacgca acaataaggt tatctttata aaatatggtt agcaatgggc agcagtttga
     7681 aataattctt ttgtcaacaa tttgctttct aagccttcta aaaacagttt tgttttttgg
     7741 aattacaggc aacaaaacat ttttaaactg gttttatttc aaatttgagc acaggtacag
     7801 ttcatccctt aaaagaatgc gccgggccaa agaataccaa aaccggtact ctgcagccat
     7861 cttttcatta ttgctttttg ccggccttat tcacttatac ttcgtcaaga tattttaaaa
     7921 cagaaaagtg ataacttgat ctttggggaa agcctgcctt actaaaggca cgttgctttg
     7981 cttcgatcaa aatggtaccg aaatgaaaat gtagcggtaa aaacggtttt tgtgtggtgc
     8041 taggaaatac ttttttcaat aacatagctg tgtatgtcat caaagtcttt ttcagtcagg
     8101 tttaattcgc gaagtctttt cctgataaag tttaattgac ttcttctata ggtaagaagt
     8161 tcttttacac gaagattttt tgcctttgcc tttatcatac tcaactcaat ggttgcatcc
     8221 ttgccggcgc gtattagttc attcagagcg gcatcattgt aaattgtcat ataagaattt
     8281 tatattgatc atatacgcaa cccatcatca tctttgatta aacaccttat gcctgcgcct
     8341 gttacccact gcagcaaaag aaagagatgg ttttcccggc aacgataacc ctgcaccctc
     8401 catttcgtac ggatgatctt taaccacagg aatgctttga ttggtgagtt tatggatatc
     8461 acgcaacaaa gctttttcct ccatcccgca aaacgaaatt gctttaccac tcaggcctgc
     8521 tcttcctgtg cgcccgatac gatgaacgta tgtttcggca atgtttggca attcgaaatt
     8581 aattacgtga gaaagattat caatgtctat tccgcgtgcc gctatgtctg ttgctacaag
     8641 cacttgtatt tttctgtttt taaaatcatc cagcgcgttc tgtcgttgca cttgcgattt
     8701 atcaccatga attgactgca cttttatatt tgctttctgc aaagcgtagc aaagtttatc
     8761 tgcaccaaat tttgtcccgg taaatataag agcattggtg atctcgtctc ccgttaacag
     8821 gtgtaaaagc agcgctcttt tgttttctct ttcaacaaaa taaattgcct gttcaacttt
     8881 ttctgccgtt gatgctaccg gtgtcacttc tattctaacg ggatggttca atattgtttt
     8941 tgataaatgt gcgatctccg gaggcatcgt tgcagaaaaa aagagagttt gtttttgttg
     9001 cggcaatttt gaaatcactt tcttcacgtc tgtaataaat cccatgtcaa gcatacggtc
     9061 tgcttcatct aaaacaaata tttcaatatg cctgagcgat acatgaccct gcataacaag
     9121 gtctaataac ctgcctggag tggcaatcaa aatatccagg ccttctctta gcttttttac
     9181 ctggctgtac tgaggcacac ctccaaatac cgctgcctgc tttaaccctg catacctgcc
     9241 atatgctgaa aagctttctt ctatttgcac cgctaattca cgggtaggcg taagcacaag
     9301 cgcttttatt tgcctgccag ctctactgcc ttcttttttg ctgcccaaaa gttgtaatat
     9361 cggcaacgca aacgctgctg ttttcccggt acctgtttgc gcacaaccta gaaggtcttg
     9421 ttgctgtaag ataacgggta ttgccttttg ttgtatcggt gtgggttctg tgtaaccctc
     9481 gtgttgcaag gcctttatta aaggcgcact caactgtaaa tctttaaaat ccaaaatatc
     9541 taattaattt ttaatgatag gcatgtcgtg catgccgatt attctgcctg ccttctttct
     9601 tcggtgcaag ttgtgcaacc tcttttgcag gcttattgtt ttctatgtgt aagcagtatt
     9661 tatttgtaag tgtgcgacga atatcgttgt tcaaccttaa ttctctcttt ccttcaccgg
     9721 gagtacgtgc agatataaaa ggatgagaat gatgattccc tggcaataat atatagaagc
     9781 ctggcttact ggtggccact atggtgattt taatttagaa gaagttcttg tggttgttgc
     9841 ggcgctgaaa tggtttatcg ccataactcc tgttttctct ttccctggcc acagaaacag
     9901 agagcatacg accctcaatt tctttgttat taagccctgc catcgcttca ttcgcttgct
     9961 cttcagaatt catttctaca aacgcaaaac cgcgcggcct gttagtttct ctgtcggtaa
    10021 taatttttac ggaatcaact tcgccgtact tagaaaataa gtctttaagg atttcttctg
    10081 tagtatggaa actcaaattg gacacataca tcttcataaa aaagatttag taataattaa
    10141 attttaaatg agggagtaga aacgaaattt gagaaggcta atatttacta attatagcaa
    10201 agatgagatt gtcttgtttt gcttttacag ctcaattatg gcgtaaagct acgtgaaata
    10261 accggaataa cgattaattt tttgccttgc cagtactctg cccaatgaag atcagaatag
    10321 aaaacagaac attgggatgg caattaaggg gcaggttatc aacaaaatgc aaaatgaatt
    10381 gccgattcgg aacatgcggt ttaaatagtt tcaaaggcaa aacgccctta tcttttttac
    10441 tcgcgggccg cctggttttt tggcgcagat tttagatgtt cttatatgaa ataaatattt
    10501 tctgatcact tatttcagct tacctaaaga aacaaaccta tggcaggaaa acaaccagcg
    10561 gttgaaaaac tagagcacct tgttaataag aagccggaat tgaaatcggc actaaccgcg
    10621 gctattaagg aggcagatga aaaaggcatt gaaacccttc cccggtttta caatttctta
    10681 aatggattac ttacacgtat tcctaccgat gaagaattca attcatcaac agaaaagttt
    10741 tggcatatct tgaataaatc gccgaatgaa accctaaaaa caagtgatgt atttaatgag
    10801 tggataagag aattcattat gtcaatgggc cgttacatgg attcaacaga atctgcaaaa
    10861 ggaattgagt cgtttttgaa agatcgaaag aataagatcg aagaatactt tgcgccacca
    10921 ggtggctggt tgacatacaa cctgtttctg gcccgacaag tgaagccggg caaaaggccg
    10981 gttgacaatc gttgcgacga tgatattatt gtttctccta ccgacagcgt ttacctcgga
    11041 aaatgggaga tgaaagatga tgcaacgata acagtaaaag gtgatacata cgacataaac
    11101 gatttactcg caggtagccg ctatcagcgc cgatttaaag gaggcctgtt cacacacctt
    11161 tacttaagcg tgaatgatta tcaccggtat catatgccgg tcagtggaaa ggtggttgaa
    11221 gtgaaaaata ttccaggccg aacctgggta aacatggtag agaaactaac cggcaaagag
    11281 gcagtagatg acatcgggtt ccagttcaat caaacacgcg gttacatcat catcaaaaca
    11341 aagaacatcg gttttgttgc agtggttcca gtcgggatgg gatttgtctc ctccgttacc
    11401 attacggtag atgaaggaac aacacttgca aaaggagatg agtttgggtt ttttgcgtat
    11461 ggtggttctg acataatcat gttgtttgaa cccgatacca ttaagttcac cgctttcgcg
    11521 cgcaagcact acctgcaggg ccaaaaaatc gcaaaggcaa tcaaataaaa tgaggctgca
    11581 taaaaaagaa aattacgcat tgcataaact gcaatgggga gcctcttcca tgctcctctt
    11641 cattcgtagt tgacaagcaa tcaccagtga agatttgaga taaacccccg atgttgcccg
    11701 acatcacaac gtacgatggc cagcattaaa tttttatttt tttaaggttt tgtgtacttc
    11761 atcttttatc tttatcacag cattttgtgg ctgaagaata cgaacaccac acgttacgaa
    11821 tacctgatac cagtgctgac agcttgccgc aaaatagctc cacttaagca aaggacaatc
    11881 aaaagcctga ttgtaaaata atttagaccg tttgtttcca tagttaggtc aggcacgact
    11941 acttaatcgt caaataatcc aattgattgt tcgtccttaa agaatctcgt tcccttctgg
    12001 cagtgcaatc gctaaccggt tgttactgaa aacgaactcc gatccctcgt ttactaagtt
    12061 ccctgttccc ggtgaataaa taacgtgcag ttagcatccg catgcattac atattttctc
    12121 aaatatcaaa aaacggagta agccgaaaat ccgctcaaag agtaggcaaa atttcaaacc
    12181 ataaatggat caatcatgaa aaccaattta gcctttattg ctgctgtgat cacagtcagc
    12241 gctgcaatca gtgtgcaaca agccaacgca caaaacattt ttccagactc aggtagagta
    12301 gggattggca ccagaacgcc aactgctcaa ttggatgtca attcaacagc cacgggtcag
    12361 atagcccggt tcaatggtgg ttcaagctcc atgtatgtga gcctgttgga aggcggcgtt
    12421 taccgcggat acataggttc ctacgccgga aacaatgaag atgttgattt cggtaccgga
    12481 agctcaacat caggtaagct gcatcttact attaaagcgg tgccaaagct aacgatcgac
    12541 aacacaggca gagtgggtat tggcaccgtt tcgccggtcg ccaggatgga gatctaccac
    12601 aacagttcgg tttcaaatcc tcaattgtta ttgtatgaaa gtgcaaatga ttatgcgcgg
    12661 ctgagttttc agaacacagc gacgaccagt tacttttcga tcgccggcct tccggcgact
    12721 gccactgccg catcaaaact taatttttat tattcagcgt tcggcgatat catgaccgtc
    12781 cagggaaatg ggcacgtggg catcttaacg acaaatccgc agtaccagct ctcggtgaac
    12841 ggaactatac aagcaaaaga agtgcgcgtg gaatcggggt gggcggatta tgttttcgac
    12901 aaagaatata aacttacatc actcgaagaa cttgagcaat acataaccac caacaaacac
    12961 ctgccgggcg tggcgcctgc tgcagaagtg caaaaggatg gaatgaaagt aggcgagatg
    13021 aataaagcga tgatggaaaa aatagaagag ttaacgctct atgtaattca actgggcaaa
    13081 gaaaacaagc agttgaaaag cgaaatagaa gcgcttaaga aataattttt tttcatcttc
    13141 taaattcaat ttacatgaaa aagattattc attatatcgc acaatccatt cggccaccgg
    13201 tagccttgct gttagcgttg ctactgatcg aaggcagtgt tgcggcgcag gacaatgaac
    13261 ggctcagtcc cgcattcgac aaaattgcga agccgcaaag tacgcgtgga tggatttatt
    13321 tctgggagaa ttacaaagcg aatcctctta cggtttttga tgacctaaaa ggcgcctttg
    13381 aactttccaa cgacgacaaa atgatgctca tcaaaacaat caaagatgat gtgggattca
    13441 cacattatcg ctatcaacaa tactacaaga gttacccggt tttgtttggc gaatatatcg
    13501 tccaccagca acccgatggt tttgttaaca cagcaaatgg gcgtttgatc acgggactaa
    13561 agacgggaaa cacgacaaca atctcagaga agcaggcttt agaagcagcc cttcgattta
    13621 tgggtgcctc caaatacctg tggcaaaacc cggcgatgga aaaagaactc aaacgacagg
    13681 aaaaaaatga caaggccacc tatcttccaa aaggtgagct gatgtacgcc cctgataatt
    13741 ttaatgagac ttacaaggcg tctgattaca agcttgcatg gcacttcacg atctataccg
    13801 atgatgccaa cgtgaaggct aagaatgtgt acgttgatgc gaatacagga aggatcattt
    13861 atttcgccga tatcgccatg aactgctccg gcgcgacggg cacttccgct tacaatggct
    13921 ccgtttcttt tagtacagag tttaccggaa gcaattatcg gtcgcacaac aattgccagg
    13981 ctaccgacat ctatgtctac aactgcaatc gcggcggcgc ctcaaatacc ttttatacgg
    14041 atggagacaa ctcctggact aaccaatctg cgacacaggc gcagtggggt gcattgaaga
    14101 cctacgacta ctacctgggt acacatagcc gcacaagctg ggacaattca gcgggtgatc
    14161 tgatcgccta caacaatgca gtttatggca atcctcccac cgcaaacaac gcgtgctggg
    14221 gatgcacagg caacagcgca atttttggag caggcaccac cacttcagca acagacgact
    14281 ggaataccga tgacatcatg ggccatgaat ttacgcacgg tgttacccaa agtgaagcag
    14341 ggctcgttta taacaaggaa tcaggagctt tgaatgaatc attcagcgac atatttggtg
    14401 aaatggtaga aagttggtcg gaagggaatt gtgattacct cgtgggtgct gatcgtggcg
    14461 ctatccgtag cttcattaat cctaacagtt atggtgaccc tgatacttat ctgggcacaa
    14521 actggtatac aacatcggga tgtactccga gcagcgacaa tgacaactgt ggtgtgcaca
    14581 caaacagcgg tgtacaaaat cgttggtttt atttattggc ggaaggaggc agcggcgtaa
    14641 atgacctcgg aaaatcttac aatgttacag gcattacccg ctttgaggcg aggcagatcg
    14701 cataccgggc actgagtgtt tatcttacat cctcgtcaaa gtatattgat gcaagaaaag
    14761 ccagtttgca agccgcatgg gatatttatg ggcaatgctc accagagatc atcgcagtcg
    14821 gcgatgcatg gcatgcagtg ggcgtagaat ctcagtcacc agcatactcg ttcaatgtgt
    14881 gtggcacata tccggcttcg ggcactgtcg aacaggcaat ttcgttactc acagcttcgt
    14941 ctaccggttg cactacggag atcacggcaa gctcgtctac tgtttacttc accgcccgcg
    15001 accgggtgat cttatatccg ggctttaaag ctgatgcggg ttcaaatttc gtagcatacc
    15061 tcgagccttg ctcgtcaacc aggtggagaa ccggcaggcc tgacgcgccg aagagcgaag
    15121 aagaaaagcg cggtcaaact ccggttgctg taacagctaa tacacaaacg actgaagaag
    15181 gagacgctat gaatactgca aacgctctcg cagccggtgg aattagcgtt ggtccaaatc
    15241 cgtttacttc gaacattatc atctctgtga atgcaaaacg agacggaaag gcagacgtaa
    15301 gtgtctataa tgctgtagga aaaaagctaa aagaacaaat cggcattaat atttctgaag
    15361 gcttgaataa aataactttc aacgctgctg atctttcgca gggcatttat atgcttgaaa
    15421 ttaatgttga cggcaccaaa acagttaaga agatcgtcaa actataggtt gattcaattt
    15481 agcgtttaac tgttttcgtt acccaaaggg tttcatttta cacatctggt aagtgaaacc
    15541 ctttggtttt tcatggtagc gttcaatacg atttaatgag ctattcccgc ccttatgcat
    15601 aacaaattgg aacaaggatg cattacggtt actcaacgac aacattggat tattatgcag
    15661 ctgccgttgt tcatgaatga caaagaagtg aactttcttt agggccatcc tcctgttttg
    15721 taaattacaa cctcgaagcg ttggtgtttt tgagttcggc cggtggtaaa ttatttgacg
    15781 agatcgatgg tgttaaatga acgagaggct tttttcatat tcccgaaatg ccgaccttga
    15841 actacattca aaaacgaatt actgtgactc acggaacgct attttcttta ccggcctgtt
    15901 gtatattgct atctatgatg ggatcaattg atgctgccgc acaatttccg ccgggtacaa
    15961 atgttgatga atctaaagtg ccaccttacg tattaccaga tccactggta atgtcaaatg
    16021 gcaaacgggt aaaagacacg accgattggt acgctgttca gcgaccatac atttatcacc
    16081 tgtttgaaca aaatgtgtat ggaagatatc caacacagcc tgttactgtt cattttaaaa
    16141 taa
//
LOCUS       DASQJI010000350         1998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_39800,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000350 DASQJI010000000
VERSION     DASQJI010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39800"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VEV83_09835"
     CDS             complement(<1..603)
                     /locus_tag="VEV83_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HYK45459.1"
                     /translation="MLVKTFGSAVYGVEAITITTEVNVSAGQHYTIVGLPDNAVKESL
                     QRLESAIKTNDYYMPRIKIVVNLAPADIKKSGSSFDLPIAIGVLGASEQIEEPERLSQ
                     YVMMGELSLDGTVQPIKGALPIAIQARKEGFKGLIVPKANAREAGMVNNLDVYGVTHM
                     NEVVEFFKNENSLKPVVVNTREEFFDSQQQFDVDFNDVKGQ"
     gene            complement(801..1328)
                     /locus_tag="VEV83_09840"
     CDS             complement(801..1328)
                     /locus_tag="VEV83_09840"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HYK45460.1"
                     /translation="MKKLIYIFVVAAIAVACNTATTPGGGTDAEANKAKVQSFYDQVI
                     NAHNVDAIDSFCSADFVDHNPDPGHSGKGIDDLRAGFKDFFSGFPDVHVATNFMVASG
                     DTVVSHVTMTGTNSGAMMGMPATNKKATVDGIDIIVIKDGKAVERWGEFDNAKMMQDL
                     GMMPQPGAPKDTTAK"
     gene            complement(1466..>1998)
                     /locus_tag="VEV83_09845"
     CDS             complement(1466..>1998)
                     /locus_tag="VEV83_09845"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45461.1"
                     /translation="DAQVPTLILPEAITVTKNTGKLTSKGIEFEMAAIPVNGLQADYN
                     FGYTNARYKSLKISQNGETVDLEGAKQIFTPDVTSSLALQYSYMLQQKNRLKLVVRGE
                     WSYLGAQYFDVTNTIRQSPYNLLNTRVGLSSKHADLFFWGRNLANKAYIAYAYDFGGV
                     HLADPKTYGVTLTLRL"
BASE COUNT          510 a          464 c          426 g          598 t
ORIGIN      
        1 ctgtcctttc acatcattga aatcgacatc gaactgctgc tgtgaatcaa aaaactcttc
       61 gcgcgtattt acgacgactg gcttaagcga attttcattt ttaaaaaatt caaccacttc
      121 attcatatgc gtgacgccgt agacatcgag gttgttcacc atgcccgcct cacgcgcatt
      181 tgctttagga acaataagtc ctttgaatcc ttctttcctg gcttgtatcg caatcggtaa
      241 tgcgcccttt atcggctgaa ccgttccatc caaacttaat tcgcccatca ttacgtattg
      301 gctcaaccgt tcgggctctt cgatctgttc gctcgcgccg agcacaccga tcgcaatcgg
      361 aagatcaaaa gaagatccgc tctttttaat atctgccggc gcaagattca ccacgatctt
      421 aatacgcggc atgtagtaat cgtttgtctt gatcgcgctc tcgagtcgtt gtaaactttc
      481 ctttacggcg ttgtcgggca agccaacgat cgtgtagtgc tgccctgcac tcacattaac
      541 ttctgtggtg atggtgatgg cttctactcc gtagactgcg cttccaaaag ttttgacgag
      601 catcggttta gtttgtgagg gtaaagcagt ttttctttct cggttgaaat tttgttcagg
      661 gtccaaaaaa gtttctgaat ataaagtact aagctagcta aaaaactttt tcataaatgc
      721 tttgatcaga tattatcgaa taaaaaaggt tccggcttga tgcagaacct ttttcggatg
      781 ctgttatgaa cttcgtcaaa tcatttggcc gttgtgtcct ttggtgcacc tggctggggc
      841 atcataccaa ggtcctgcat cattttcgca ttatcaaatt ccccccagcg ctcaaccgct
      901 ttcccgtctt taattacgat aatatcaatc ccatcgacag tggccttttt gttggtggca
      961 ggcattccca tcatcgcgcc tgagttagtg ccggtcatcg ttacatgaga aaccaccgtg
     1021 tcacccgatg ccaccataaa attggttgct acgtgaacat caggaaaacc ggaaaagaaa
     1081 tctttgaagc cggctctcag atcatcaatg ccctttccgg agtgacccgg gtcaggatta
     1141 tgatcaacaa aatcggcact gcagaaagaa tcgattgcgt ctacgttgtg tgcattgatg
     1201 acctggtcgt aaaaggactg aacttttgct ttattagctt cagcgtctgt accgccacct
     1261 ggagtagttg ctgtattgca ggctacggcg attgcggcaa caacaaaaat gtaaatgagc
     1321 tttttcattt tgatcttgct ttaagtgaaa aatgggacat taaatgtaaa aagaataatc
     1381 taaggtgccg gatattaaaa tcggtcagac ctttccaaag ggtcagaccg ttatactgca
     1441 ttcatctaac aagagttaaa aaaagctata acctcaatgt caaggtgact ccatatgttt
     1501 ttgggtctgc caggtgcacg ccgccgaagt cataggcgta agctatatag gctttgttcg
     1561 ccaggtttct gccccagaaa aacaagtccg cgtgttttga acttaagcca acccgtgtgt
     1621 tcaacaaatt atatggagat tgtcttattg tgttcgtcac gtcaaaatat tgagcgccta
     1681 agtaagacca ctcaccgcga acgacgagtt taagccggtt cttttgttgc aacatgtagc
     1741 tgtactgaag cgcaagagaa gaagtaacat ccggtgtgaa tatttgcttc gcgccttcca
     1801 ggtcgactgt ttccccattt tgcgaaattt ttaaagactt gtatctcgca ttggtgtagc
     1861 caaaattata atctgcctgc aaaccgttta ccggaattgc agccatttcg aattctatgc
     1921 ccttgctcgt gagtttaccg gtgttctttg taactgtgat tgcctctggc aatattagcg
     1981 tcggtacttg tgcatccg
//
LOCUS       DASQJI010000351         8179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2651415,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000351 DASQJI010000000
VERSION     DASQJI010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8179
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2651415"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            441..944
                     /locus_tag="VEV83_09850"
     CDS             441..944
                     /locus_tag="VEV83_09850"
                     /inference="COORDINATES: protein motif:HMM:NF021453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 domain-containing protein"
                     /protein_id="HYK45462.1"
                     /translation="MLATSTLFRIAKTVSVAAIALMAVIIVVGNTTDYWTNYLFVEHV
                     MKMDTIFPDSNMHYRSIHDPVLFHAGYILIILLEFLMAFCCIKGSWILFTSLKADAAR
                     FHASKNWAVAGITIGIILWFLGFEVIGGEWFAMWQSTTWNGLASAERIVDFLVLTLIL
                     LHLKENN"
     gene            complement(1013..3394)
                     /locus_tag="VEV83_09855"
     CDS             complement(1013..3394)
                     /locus_tag="VEV83_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HYK45463.1"
                     /translation="MKKIFCYLLATIFLNGILFAQNNSLEIVNAVEPQPLLAQATRLA
                     DALAFLGSSLSKADAQRLKELQSKPLTESTSVLIQNILDPYCLAMVSINPEARVKVAR
                     GPAKGKLMQGGWTSFLIKVKNEAGVTAQLDAQSANAKPDLFISTSNPRAEQENALTQG
                     QVENRFLEIQMYRSRPLLPNLSGLKLEYAVLQVYSKDAGTREAEIGFNIGQGTQDIGF
                     RNTINILFNIQHAVKVVLHVKDDDGSPAMASFTFTDGIERVPDEKGTDYRLTLAQTEF
                     QTSSKELTGVYPLPSRRVASYDEYPDFFFQPQIYRSDGEHILLPPGTYNVAYTRGPEY
                     IIQRRQIVVPPNVDSMQLYFQLKRWINMSKFGWYSADHHVHAAGCSHYESPEEGVPPI
                     DMWRQIVGEDLNVAAVLTWGPSWYHQKSFFTGQVSPLSTKENIMRYDVEVSGFPSSHA
                     GHIVLLRLKEDDYPGTTEIEQWPSWTLPVLKWAKSQGAVTGYAHSGWGLEPIEPTNDL
                     PNYVMPKMDNIGANEYIVTVTQDAVDFYSAGDTPAPWELNMWYHTLNCGFRTRLSGET
                     DFPCIFDERVGLARSYFRPDSLLNYDAYVAAIKKGNCYVSDGGSHIIDFSVNGVQPGI
                     RNSELDVSGVQNLKVTAKIAAYLPDQQTEEGAAIAKRDFSEQPYWNIERARIGTSRKV
                     RVELIVNGEPVDTTEIVADGNWNDVNFNYPLSTSGWIALRVYQSSHTNPVFVIDDGKP
                     IRVLKSVQWCRQAVDQCWKMKQGKIRPEEQAAAKQAYDKADAIYDQMIGEAKN"
     gene            complement(3674..4237)
                     /locus_tag="VEV83_09860"
     CDS             complement(3674..4237)
                     /locus_tag="VEV83_09860"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HYK45464.1"
                     /translation="MRTIFGKVMIVLLPVILILNYRCESQPGSNLRQVVIIRHAEKPD
                     KGDNLSCQGFNRALALPAVLYAKYKLPDHIFVADIKSGKSTNQARMYQTIVPFAIKYN
                     LDIDTRYAAEDVKALAEAIEKSSGYVLVVWEHNGIEDLVQKLGVENKDLKWKDSDYDS
                     IWIVTFKDGKAVLTVDKENINPGTACK"
     gene            4398..6428
                     /locus_tag="VEV83_09865"
     CDS             4398..6428
                     /locus_tag="VEV83_09865"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK45465.1"
                     /translation="MRKLAAIMFTDMVGYSALAQKNEALALDLLDEHRKILRPLFTRH
                     EGREIDTAGDSFFVEFNSAVEATNCAVEIQTVLHERNKTEVEERRILLRIGLHIGDVV
                     YVGDNVHGDGVNIAARMEPLATPGGICISEDVARQIRNKIDHPVIKLGPGKLKNISMP
                     MEIYCIELPWLKTTKLKKTSWPRKKILPYLVPAVVLVAALALFFFAKDRSSEPTAESK
                     QRVAVLPLANISNDPKDDYFADGMTEELISSLSKISGLNVIARTSVMKYKTGDKDISQ
                     IGKELMVGSILEGSVRKVNDRARINVQLINVSNQEPVWSTEYDRELKDIFMTQSEIAQ
                     KVANELKVRLVSSEKEQLEKAGTENMAAYQEYLIGRYFLNQKTPESIQAALVHFESAN
                     KEDSTFALPYSNVAYCYTLIGVAGYGNISRDTAEIKAKQAVMKALQIDGSLAEAHAAL
                     AYIKFRFDWDWKGAEDEFKKAIALKPGYSTAHEWYALFLAVQARLDEALKQMQTAYQL
                     DPLSTSVNNGLARIYHFRNENEKVIAQVNKTLTLDSNYAEAYFTQGINYFKLGEYEKA
                     EPELKKAIDLSNRRPVIVGLLGCVYAKEGKTQEANKLLTELETGAKNNDNLYAAALIQ
                     LSMGQQQQALSVLNKLINEKYGIMIYLKVEGEFFLGIDKTTYARLLKEIGFE"
     gene            6708..>8179
                     /locus_tag="VEV83_09870"
     CDS             6708..>8179
                     /locus_tag="VEV83_09870"
                     /inference="COORDINATES: protein motif:HMM:NF026255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK45466.1"
                     /translation="MRTKLSLILLFLPGLLTGQAQSKIWGKVFNAEDKPLARASILLL
                     NPKDSALVKGTLTNETGGYSFENIAAGEYIISAAYAGLDQLYTPKFIVAEMENHQVVN
                     IKLQATKELQEVVVSAKKPLYEQKIDRLVINVAAAITYTGISALDVLERSPSVQVNRV
                     QNILSINSKEGVIVMINGKRNYMDMASVIEMLSGMPSGNVDRIEIITTPPANFDADGT
                     AGVINIVLKSNAQYGTNGSYTLTAGYSKGDGESGSFNINHRKEKLNIFGNFSFSRTNL
                     QQLRTSYHATTNDSDLLENYSEDNRDAKQIQTNGQAGIDYHINKKTIVGALFSTNYRK
                     WTMESLNDAFVTNNHQTDTVIDIVNNELHTTLYYGANLNLQHDFRPDEKLTINGDYLY
                     YKDKNPSTYLNNYYDDVGDFLFKENVESNKLTPLHFWIVAADYSKKLSKNLDLEAGLK
                     GTTSGLEDGIQVASLTRTDWITDTTLSGSHRLNESIGAAYT"
BASE COUNT         2329 a         1864 c         1780 g         2206 t
ORIGIN      
        1 tgacccatgc gaaaccatcc tctgcttaaa tattcatcaa gttgccggcc ggtaaggttt
       61 tcggggaaat gtatatcatc tatcatcttg cataaacttc attgcgcttg cagctaatca
      121 aatttatgaa tgttttattc aagcaaggtc aatgcaagtg attctccgct aatagcgctt
      181 attacaatgg caacttcatc tgcccgatca acaaaagaaa ctttggaaga caaccttcat
      241 ttctagcacc acgccggcga gcgtttctag caacctgcac aaaaagcgat tgaataacca
      301 cgctggtaaa ataagggatt ccgatttaca tccggtttaa aaaacagccg cactgctttt
      361 cattattttt tattgcaaac gaaagaggtt aagtttgatg acagggtctc ccgattttcg
      421 aaaaccaaaa cttctaagac atgcttgcaa catcaacgct ttttcgcatt gccaaaactg
      481 tttcagttgc tgctatcgct ttgatggcgg ttataatcgt cgttgggaac acaactgatt
      541 attggacgaa ttacctgttc gttgaacatg tgatgaaaat ggatacgata tttcccgata
      601 gtaatatgca ctatcgcagc atacatgacc cggttttatt tcatgccggg tatattctga
      661 ttatcctgct ggaattcttg atggcttttt gttgtattaa aggaagttgg atcttgttca
      721 cgagtttaaa ggcagatgcg gccaggtttc atgcatcaaa gaactgggcg gtagcaggaa
      781 ttacgatcgg tatcatcctc tggttcttag gttttgaagt tataggaggc gagtggtttg
      841 ccatgtggca aagtacaaca tggaatggct tggcttctgc agaacgaatc gttgattttc
      901 ttgtactgac actgatcttg ctccatttga aagaaaataa ttgaaccgca agcaaatctt
      961 tacatcagaa atcaggagat cacacatcag agatcctaga tcaagcatcg catcagttct
     1021 tcgcttcccc gatcatctga tcatagatcg catcggcctt atcatacgct tgctttgctg
     1081 cagcttgttc ttcaggacga attttcccct gtttcatttt ccaacactga tcaactgcct
     1141 gcctgcacca ttgcacactt ttcaacacgc ggatcggctt tccgtcgtca atcacaaaca
     1201 ccggatttgt atgggagctt tgataaacac gtaaagctat ccaacctgac gtgcttaatg
     1261 ggtaattgaa atttacatca ttccagttgc cgtcggcaac aatttctgta gtgtcaaccg
     1321 gttcaccgtt cacgatcagt tcaacgcgga cctttcttga cgtaccgatg cgagctctct
     1381 caatattcca gtatggttgt tcactgaaat cacgttttgc aatggctgcg ccttcctcgg
     1441 tttgttggtc gggaagataa gctgcaattt ttgcggtcac tttcaaattt tgcacaccac
     1501 taacgtccaa ctcgctgtta cggatgcccg gttgtacgcc gttcacagag aaatcgataa
     1561 tatgcgagcc tccatcagat acataacaat tccctttctt tatcgcggca acgtacgcat
     1621 cataatttaa taagctgtcg ggcctgaaat aacttcttgc caaaccaact ctttcatcaa
     1681 atatgcatgg gaaatcggtc tcaccactta atcttgttct gaatccgcag ttcaaagtat
     1741 gataccacat atttaattcc catggtgcag gcgtgtcgcc cgcactgtag aaatcaacgg
     1801 catcctgcgt aacggtaacg atgtattcat tcgcgccaat gttatccatt ttgggcatca
     1861 cgtaattagg aagatcattt gtcggttcga tcggctccag tccccagccc gaatgagcgt
     1921 agccagtaac ggcaccctgt gatttcgccc attttaaaac cggcaatgtc caactcggcc
     1981 actgttcaat ttccgttgtg cccgggtagt catcctcttt taagcgaagc agtacaatat
     2041 gccccgcgtg cgacgaaggg aatcccgata cttccacatc ataacgcata atattttctt
     2101 ttgtagatag cggactcacc tgcccggtaa aaaaactttt ttgatgatac cagctcggtc
     2161 cccatgtgag cacagccgcg acattcagat cttcacctac gatctggcgc cacatatcga
     2221 tcggtggaac accttcctcc ggactttcat agtggctgca cccggccgcg tgcacatgat
     2281 gatctgcact gtaccagccg aactttgaca tgttgatcca tcttttcaac tggaaataca
     2341 attgcatcga atcaacattt ggcggcacaa cgatttgcct gcgttggatg atatactcgg
     2401 gccctctcgt gtatgcaaca ttgtacgtgc cgggcggaag caagatatgt tcgccgtcgg
     2461 aacgatagat ctgcggttga aagaaaaagt caggatattc gtcgtacgat gcaacccgcc
     2521 gcgatggtaa agggtaaacg cccgtaagtt cttttgaaga tgtctgaaat tctgtttgcg
     2581 ccaaagtcaa ccggtagtca gtaccttttt cgtcgggcac acgctcaata ccatctgtaa
     2641 atgtaaatga cgccatcgca ggtgagccat catcgtcttt tacatgcagc acaactttta
     2701 cagcatgttg aatgttgaat aaaatattga tcgtattacg aaagccaatg tcctgtgtac
     2761 cctgcccgat attaaacccg atctctgcct cacgcgtgcc cgcatctttg ctatacacct
     2821 gcaatactgc atactccaat ttcaatccgg aaagattcgg aagcagcgga cgactacgat
     2881 acatctgaat ttcaaggaac cggttctcca cctgcccttg cgtgagcgca ttttcttgtt
     2941 cggcacgagg attcgaggtg gagatgaata aatctggttt ggcattagca ctctgtgcgt
     3001 caagttgagc agtaacgcct gcctcatttt tcactttgat caaaaagctt gtccagcctc
     3061 cttgcatcag tttacccttc gccgggccac gtgcaacctt tacacgcgcc tcgggattaa
     3121 tactcaccat cgcgaggcag tatggatcaa gaatgttttg aataagcacc gatgtcgatt
     3181 cggtgagtgg cttgctttgt aattctttca atcgctgcgc atcagctttc gataaagaac
     3241 ttcccagaaa agcaagcgca tccgcaaggc gcgtggcctg cgccagtaaa ggctgcggct
     3301 cgacggcatt cactatttca agagagttgt tttgggcaaa caatattccg ttcaaaaaaa
     3361 ttgtcgcaag caggtaacaa aatatttttt tcattttttg tttttctgtg ctgattttag
     3421 cctcctcgaa attgctacta aactgcgaat ttccacgtcc ggaaacttcc ataacacatt
     3481 taccagcttt aatgtgttgt ccgattaaga attgaaacga cgccggtcgg aggtttcacc
     3541 gtgctttgtg aaaatttgtg tctttgcgtc tccgtgattt gccaattttt gaaccaccaa
     3601 gtcgaaggcc cgaagacgca cttagaaaaa atgagctggc atccgaaaaa tcaatggcgc
     3661 attacgttac tatttactta catgcagtac ccgggttgat attctcttta tcaacagtca
     3721 gcacagcctt tccatccttg aatgtaacaa tccaaataga atcataatcg ctgtccttcc
     3781 atttcagatc tttattttct acaccaagct tttgaacaag atcttcgatc ccattgtgtt
     3841 cccatacaac caatacatag cccgaacttt tttcaattgc ttcggccagg gcttttacat
     3901 cttctgcggc atatctcgtg tcgatatcca gattatactt tatagcaaac ggaactatgg
     3961 tctgatacat tctcgcttgg ttcgtggact tgccgctctt tatgtctgcc acaaaaatgt
     4021 gatcaggcaa tttatatttt gcataaagca ccgccggaag tgcgagcgcg cgattgaagc
     4081 cctggcagga aaggttatct cccttatcgg gtttttcagc atggcggatg atcacgacct
     4141 gtcttaagtt tgagccaggc tggctttcgc agcgataatt taaaatcaaa atcacgggca
     4201 gcagtacgat cattactttt ccaaagattg ttcgcatgaa atttttttaa agatcaaatt
     4261 aattgaaaat cgcaacaccg caattcgtgc attaaagaaa tcatttataa aactggctaa
     4321 cgagaataat cgtattttta gtttgttatg cccggcctcc tgaaatatgt gcaaactatt
     4381 ctaaatttcc tcgagtcatg aggaaactag cggcgatcat gtttacggat atggttggtt
     4441 acagcgcgtt agcccaaaag aacgaagcgc ttgcccttga cctacttgat gaacacagga
     4501 agatcctgcg accacttttt acaagacatg aaggtcggga aatcgataca gccggcgatt
     4561 ccttttttgt cgaattcaac agtgcggtgg aggcaacaaa ttgtgcagtc gaaattcaaa
     4621 ctgttttgca tgaacgtaac aaaactgaag tggaagaacg acggatcttg ttgcgcatcg
     4681 gtttgcatat tggcgacgtg gtttacgtcg gcgataatgt tcatggagat ggcgtgaaca
     4741 tcgccgcgcg aatggagcct ttggcaactc ccggtggaat ttgcatttct gaggatgtgg
     4801 cccggcagat caggaataag atcgatcacc cggtgataaa gctcggcccc gggaagctca
     4861 aaaatatttc catgccgatg gaaatttatt gcatagaact tccctggctt aagactacaa
     4921 agttgaaaaa aacgtcgtgg ccccggaaga aaattctgcc ttacctggtg cccgccgtgg
     4981 ttttagttgc agcacttgcg cttttctttt ttgctaagga tcgaagctcg gaaccgactg
     5041 ctgagtcgaa acaaagagtt gctgttttac cacttgccaa tatcagcaac gacccgaagg
     5101 acgactactt tgccgatggt atgaccgaag aacttatatc gagtctctca aaaattagcg
     5161 ggctgaatgt gatcgcgagg acttccgtca tgaaatataa aaccggggat aaagacattt
     5221 cgcaaattgg aaaagagttg atggttggga gcatcctcga aggcagcgta agaaaggtta
     5281 atgaccgcgc aaggatcaat gtgcaattga tcaatgtttc aaaccaggag ccggtgtggt
     5341 cgaccgaata tgacagggaa ctgaaggata tttttatgac gcaaagtgag atcgcacaaa
     5401 aggtagcaaa tgaattaaaa gtgcgccttg tttcttcgga aaaagagcag ctcgaaaaag
     5461 caggcactga aaacatggcc gcataccagg aatacctgat cggaagatat ttcctgaacc
     5521 agaaaacgcc ggagagcatt caggccgcgc ttgtacattt tgagagtgcg aacaaagaag
     5581 attcgacgtt tgcgctgccg tattcaaacg tcgcttactg ttatacactc attggtgttg
     5641 caggttatgg aaacatctct cgtgatactg cggaaataaa ggcaaaacaa gccgtgatga
     5701 aagctttgca gatagacggt tcgcttgccg aggctcatgc ggcgctggcc tatataaaat
     5761 tcaggtttga ctgggactgg aaaggtgcgg aagatgaatt taaaaaagcg atcgcattga
     5821 aaccagggta ctcaaccgca cacgaatggt acgctttgtt tcttgcggtg caggcaaggc
     5881 tcgatgaagc gttgaagcaa atgcagacag cgtaccagtt agatcctctt tccaccagcg
     5941 taaacaacgg gcttgcccgg atctatcatt tcagaaatga gaatgagaaa gtgatcgcac
     6001 aggtcaataa gacgcttaca ctcgattcta attatgctga agcatatttt acgcaaggga
     6061 tcaattactt taagttagga gagtatgaaa aagccgaacc ggaattaaaa aaggcgattg
     6121 acctttcaaa caggaggccc gttatagttg gattgttggg atgcgtgtat gctaaggaag
     6181 gaaaaacaca ggaagccaat aaattactta cggagctcga aacgggcgct aaaaacaacg
     6241 ataatcttta cgccgctgca ctcatccagt tgagcatggg acaacaacag caggccctca
     6301 gcgttctcaa taaattgatc aatgaaaagt atggcatcat gatctacctc aaagttgaag
     6361 gcgaattttt tttaggtatc gacaagacca cgtatgcgcg cctgctgaag gaaataggtt
     6421 ttgaataggc gcaaatatga gcgacctggc ttactcgggc ccatcattcc tttccgcatg
     6481 ttcaattctt gtattgcgtc attcgctcat tctggttgct aaaatcatct atcaaaaata
     6541 gttttgacat aactcgcagc ttctattttt tgtaatttct tcttcctctc accgtttact
     6601 caatcatttg cgtcagttat cagcttaaga gtatattcgt tatccgtata aattatgctc
     6661 ccactaaaac taactactat taccgtttac ctgcgacgat gaaaattatg agaacaaagc
     6721 tttcgctcat ccttcttttt ttacccggtt tgcttacagg ccaggcacag tcaaagatct
     6781 ggggaaaagt attcaacgca gaagacaaac ccctcgcgcg agccagtatc ttgttattga
     6841 atccaaaaga ttcagcattg gtgaaaggaa cgctaacgaa tgaaaccgga ggctacagtt
     6901 ttgaaaatat tgccgccgga gaatatatta tttcagcggc gtatgcaggt ctcgaccagt
     6961 tgtacacccc gaaattcatc gttgctgaaa tggaaaacca tcaagtagta aacatcaaac
     7021 tccaggcgac aaaggaactg caggaagttg tcgtaagcgc taaaaagccc ctatacgagc
     7081 aaaaaataga tcgtctcgtg ataaatgttg cggctgccat tacgtacacc ggcatcagtg
     7141 ctttggatgt actcgaacgt tcaccatcag tacaagtgaa cagggtccaa aatattctat
     7201 cgatcaatag caaagaaggt gtgatcgtga tgatcaacgg caagcgaaat tacatggata
     7261 tggcttcggt aatagagatg ctgtcaggaa tgccgtcggg caatgttgac cgcatcgaga
     7321 taattaccac gccacccgca aattttgacg cggatggaac agcaggcgtt attaacatcg
     7381 tactcaaatc aaacgcacag tatggaacga atggttcgta tacgctaacg gccgggtaca
     7441 gcaaaggaga cggtgaaagc ggaagcttta acatcaatca cagaaaagag aagctcaaca
     7501 tttttggtaa cttttctttt tcacgcacga atctccagca actgcggacg agttatcatg
     7561 cgacgacaaa cgatagcgac ctgcttgaaa attattccga agacaatcgc gatgcgaaac
     7621 aaattcaaac caacgggcag gcaggaattg actatcatat caacaagaaa acaattgttg
     7681 gtgcgctgtt ttcaaccaac tatcgcaagt ggaccatgga atcgttgaat gatgctttcg
     7741 tcacaaacaa ccatcaaacg gacacggtaa tcgacattgt caacaacgaa ctgcatacta
     7801 ccttgtatta cggcgctaat ttgaacctgc aacatgattt caggccggat gaaaagctca
     7861 cgatcaatgg ggattatctt tattacaagg ataagaatcc aagtacctat ctcaataatt
     7921 attacgacga cgtcggcgat ttccttttca aagagaatgt agaaagcaat aaactcacgc
     7981 cgttacattt ttggatcgtc gcggctgatt actcgaaaaa gctctcaaaa aacctggacc
     8041 tcgaagcagg gctaaaagga acaacttccg gcctggaaga tgggatacag gttgcatcat
     8101 taacccgaac cgactggata acggatacca cgctctccgg aagccaccgt ttaaacgaaa
     8161 gcattggtgc agcctatac
//
LOCUS       DASQJI010000352         6371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2651422,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000352 DASQJI010000000
VERSION     DASQJI010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6371
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2651422"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VEV83_09875"
     CDS             <1..936
                     /locus_tag="VEV83_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45467.1"
                     /translation="GNAELLMKAFVNNLDKTNSLEDAVDVADSYASINDKNIHDLILN
                     QVAYNLQQARKTENKKAVDIYKILNTLFLSMDSSNHIDVAATLGIPPVYFMPNKSMRN
                     DSGRIIIQQFFYGDKDGKNVFNAFLNHFSGANWKITYANKWVVVSSLKGVPVRIYSNK
                     PLDEEKDLDADAQAALCDYLTSNDLDPSMVIHRGHSYFLPSTLEQLDNSAKLVLLGSC
                     GAYQHLNKVLSICPTAQIISSRQTGSGLINGPMIDIIVEQLREGKDLNWPQLWKTIGN
                     SVSKHPDFEDYVPPHKNLGAVLIMAYRKQEMNEEN"
     gene            1048..2502
                     /locus_tag="VEV83_09880"
     CDS             1048..2502
                     /locus_tag="VEV83_09880"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HYK45468.1"
                     /translation="MSLTQDNRFQTIISHAKEYGFVFPSSEIYDGLSAVYDYGPYGSE
                     LKKNIRDYWWKSMTQMREDIVGIDAAIFMHPTTWKASGHVDSFNDPMIDNKDSKKRYR
                     VDHLIEGFADELREKGEEGKKEADALVERMEAFLAKDDFDSLKKLIEDNKIKCSISST
                     SNWTDIRQFNLMFSTRLGSVTDEAETIYLRPETAQGIFVNFLNVQKTSRMKIPFGIAQ
                     TGKAFRNEIVARQFIFRMRECEQMEMQFFIRPGTQKEWYEYWKEERLKWHLALGVPKE
                     KFRFHDHAKLAHYADAALDIEYEFPIGFKEVEGIHSRTDFDLGNHQSFSGKKLTYFDN
                     EINQHYVPYVIETSIGLDRMLLLILSESYEEEAIEKEDGSSDSRIVMRIPKTIAPIKL
                     AVLPLVKKDGLPELARKLFNECKPFFRCFYEEKDTIGKRYRRQDAIGTPFCATIDHQT
                     KEDGTVTIRYRDTMQQERIHMAEIAPKLQKQLAF"
     gene            2621..2902
                     /locus_tag="VEV83_09885"
     CDS             2621..2902
                     /locus_tag="VEV83_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45469.1"
                     /translation="MTQMLFFESSYSWEITFGLALAGFALGFIFKSAVIYKQRKRILR
                     LEDEMLANHARILALEKKIADSKRELKGNGVHEDFEFAQRNSAREVKVS"
     gene            complement(2899..3627)
                     /locus_tag="VEV83_09890"
     CDS             complement(2899..3627)
                     /locus_tag="VEV83_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK45470.1"
                     /translation="MPEPWRTGKFTRIEELIPGTRRFWIQIPEVENFDFKPGQFVTLD
                     LPIHEQKNKRWRSYSIASHPDGTNIIELVIVLLEGGAGTHYLFTHAKEGLDVLVRGPQ
                     GVFTLPPIIDKDLFFICTGTGIAPFRSMIRYIQLHEIEHKNIYLIFGCRKLCDTLYAD
                     EFRELEKEIPDLHYIPTFSRENKENTDIRHGYVHAIYQSLLDTEKRDAHFYLCGWKNM
                     IDDAKKNILAMGYDKKAIHLELYG"
     gene            3722..>6371
                     /locus_tag="VEV83_09895"
     CDS             3722..>6371
                     /locus_tag="VEV83_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HYK45471.1"
                     /translation="MNLGELLAGFKAHPRLFQLADRLGFADTQKIFLKNLQGSSSQFV
                     LAGLFEKYQTDKLGNLSTHLVILNDAEEAAYFHNTLENLTQALNLFYFPSSFKNRKDF
                     RHLNSSHVMLRTEALTHMSSSTTADGNKKPGIIVTYPEALFEKVILPQTLDGNLINIK
                     VNDTLDVDNIIEMFVTYGFSRTDFVYEPGQFALRGGILDIYSFGNEKPYRIELFGNDV
                     DSIRIFDPATQLSERKLLRVSIIPNVKTQFSGDETISLLEFLPDHTVVWLKDWDVIQK
                     SIEEQHEYLGSFLEHLSGNISKDENGDDDVTIFTNASPQNFVSADDILEQFSGRHVVE
                     FGYKPHFANFEIELNTKPQPAFNRQFDYLIKDLKAHEAKGYSLYIFADQARQLERLTT
                     IFTDLDTEIQFTPIATSIHEGFIDHDLKVVCYTDHQIFQRYHKYRIKQAYNKNKALTL
                     RTLKELQPGDFVTHIDHGVGRYSGLQKLEVNGKLQEAVRIIYKDNDILYVNINSLHKI
                     SKYTGKEGTVPKINKLGSDAWNRLKEKTKTKVKEIAFDLIRLYAQRKAQPGFSHTPDN
                     YMQTELEASFIYEDTPDQSRATADVKKDMENASPMDRLVCGDVGFGKTEIAIRAAFKT
                     CVDGKQAAVLVPTTILAFQHYKTFTDRLRDFPVTIDYINRFKSSKEKKETLKKVEEGK
                     IDIIIGTHGLLAKDVKFKDLGLMIVDEEQKFGVGHKEKLKTLKATVDCLTLTATPIPR
                     TLQFSLMGARDLSIINTPPPNRQPIQTEVEVFNEDSIREAIYFETERGGQVFFIHNRV
                     IGLAEMAALIQNLCPDLSITYAHGQMEGHELETRILDFIDRKYDVLVSTNIVESGVDI
                     PNVNTIIVNNAHQFGLSDLHQLRGRVG"
BASE COUNT         1898 a         1402 c         1443 g         1628 t
ORIGIN      
        1 ggtaacgcgg aactgctaat gaaggcgttt gtaaataacc tcgacaaaac aaacagcctt
       61 gaagacgcag tggacgtcgc cgactcgtac gcgagcatca acgataaaaa tattcatgac
      121 cttattctca accaggttgc atataatctt caacaagcca ggaagaccga gaataagaaa
      181 gcggttgaca tttataaaat tctgaacacg ctttttttgt cgatggatag ttcgaaccac
      241 atcgacgtag ctgcaactct cgggatacca ccggtttatt ttatgccaaa taagtcgatg
      301 agaaatgata gcggcaggat catcatacag cagttctttt atggcgataa agatggaaag
      361 aacgtattca acgcgttttt gaatcacttc agcggggcaa actggaaaat aacatacgcc
      421 aataaatggg tcgttgtttc atcgctcaaa ggtgttccgg taaggatcta ttcaaataaa
      481 ccgctcgacg aagaaaagga tctcgatgcc gatgcgcagg ctgcgctctg tgattaccta
      541 acaagtaatg accttgatcc ttctatggtt attcatcgtg gccatagcta ttttctgcca
      601 tctactttgg agcaactcga taattctgca aagctggttt tgctcggcag ttgcggagca
      661 taccagcatc tgaataaagt attaagcatc tgtccaactg ctcaaattat ttcttcccgg
      721 caaaccggca gcggtcttat taatgggcca atgatagata ttatcgttga acagttgagg
      781 gaaggcaaag atcttaactg gccccagctc tggaaaacaa ttggtaatag cgtctccaaa
      841 caccctgact tcgaagatta cgtcccacca cacaaaaatc ttggcgccgt attgatcatg
      901 gcgtaccgta agcaggagat gaacgaagaa aattaatgtt tgaaatttga agtttgatat
      961 ttgaagtttg aggtgccgtt ctccgcgtat aagttttgca acctcgaacc tcaaacgtca
     1021 aaccccaaac aactatcttt gcgcgccatg agtttaacgc aagacaaccg cttccagact
     1081 atcatctcgc atgcaaaaga atatggattt gtttttcctt ccagcgaaat ttatgacggt
     1141 ttgagcgctg tatatgacta cggtccatac ggcagcgagc tgaaaaaaaa tattcgtgat
     1201 tactggtgga aaagcatgac gcaaatgcgg gaggacattg ttggtattga tgcggccatc
     1261 ttcatgcacc cgaccacgtg gaaggcaagc gggcatgtag atagtttcaa tgacccgatg
     1321 atcgataaca aggatagtaa aaaacgttat cgcgttgacc atttgatcga ggggtttgct
     1381 gatgaactta gagagaaagg ggaggaggga aaaaaggaag ccgatgcgct ggtggaacga
     1441 atggaagcat tcctcgccaa agatgatttc gattctctga agaagttgat cgaggataac
     1501 aagatcaagt gttcaattag cagcaccagc aattggactg acatacggca gttcaacctc
     1561 atgttttcaa cccgcctcgg ttcagtaaca gacgaggctg agacgattta tttacggccg
     1621 gaaacagcac agggaatttt cgtgaacttt ttgaatgtgc agaagacttc gcgcatgaag
     1681 atccctttcg gtattgctca aaccgggaag gcttttcgta atgagatcgt ggcgcgccag
     1741 tttattttcc ggatgcgtga atgcgaacaa atggaaatgc agttctttat tcggcccggc
     1801 acgcaaaaag agtggtacga atactggaaa gaagaaaggc tcaaatggca tttggccctc
     1861 ggtgttccga aagaaaaatt ccggtttcat gatcacgcta agctcgctca ttacgccgac
     1921 gcggcgcttg atatcgaata tgaatttcct attggtttta aagaggttga agggatacac
     1981 tcaagaacgg atttcgatct cggcaatcac cagtcattca gcggcaagaa gctcacatac
     2041 ttcgataatg agatcaacca gcattatgtt ccctatgtga tcgagacttc aatcggcctg
     2101 gaccgtatgt tgttgcttat tctctcagaa agctacgaag aggaagcgat agagaaggaa
     2161 gatggcagca gcgatagccg cattgtgatg cgcataccga aaacaatcgc tccaataaaa
     2221 cttgcggtgc ttccgttagt aaaaaaggac ggtttaccgg agttggcaag aaaattgttt
     2281 aatgaatgca aacctttttt tcggtgcttc tatgaagaaa aggacacgat cggaaagcga
     2341 tacagaaggc aggatgcaat aggaactcct ttttgcgcaa caatcgacca ccaaactaaa
     2401 gaagacggga ctgttaccat acgctatcgg gacacaatgc agcaggaaag aattcacatg
     2461 gccgaaattg cgccgaaact tcaaaaacag ttggcattct gaactctgca cgttaatttt
     2521 gcaccctttg gtaaaataaa tggaatccgg taaacccatg gttttcaaat tccgtattca
     2581 tttgtgaaac cattctcaat acatatctga actcacggtc atgactcaaa tgctgttttt
     2641 tgaaagttcg tactcctggg aaattacttt tggacttgcg ctcgctggat ttgcattagg
     2701 ttttattttt aaatctgcag ttatttacaa gcaaagaaag agaattcttc gcctcgagga
     2761 tgaaatgctg gctaaccacg ctcgtatact tgctctcgaa aagaaaattg ccgattcaaa
     2821 acgcgaattg aagggaaatg gtgttcacga ggattttgaa ttcgcacaaa gaaattcggc
     2881 cagagaagta aaggtgtcct agccgtaaag ctccaggtga atcgccttct tatcgtagcc
     2941 catagccaaa atgttctttt tggcgtcatc aatcatattt ttccatccgc acaaataaaa
     3001 atgcgcatcg cgcttctcag tgtcgagtaa gctttgataa atagcatgaa cataaccatg
     3061 cctgatgtcg gtattttctt tgttctccct tgaaaaggtt ggtatataat gcaggtccgg
     3121 aatttccttt tccagttccc tgaattcatc agcataaagt gtatcacaca attttctgca
     3181 tccgaagatg agataaatgt tcttatgctc aatctcgtgt agctgtatat aacgtatcat
     3241 cgatctaaac ggcgcaatac cagtgcccgt acaaataaaa aacaagtctt tgtcaattat
     3301 aggaggcagc gtaaatacac cctgcggccc gcgcacgagc acatccagac cttcttttgc
     3361 gtgtgtaaac aggtaatgcg tgcccgctcc tccttcaagc aatacgatca caagctcaat
     3421 aatgttcgtg ccgtccgggt gagacgcgat tgaatagctg cgccaacgtt tgttcttttg
     3481 ctcatggatc ggcaggtcca gcgtaacgaa ctgccccggt ttgaaatcaa aattctccac
     3541 ttccggtatt tggatccaaa agcgtcgtgt gcccggtatc aattcttcaa tcctggtaaa
     3601 ttttcccgta cgccaaggct caggcatcta aattttttga ggaagttaca acatcaattc
     3661 attcatcagt ggatgcttcc tgtttttttg aaatctgcat cttaactttg cggcgttgtt
     3721 tatgaacctg ggtgagttgt tggctggttt taaagcgcat ccccgccttt ttcaattggc
     3781 ggacaggctg ggctttgccg atacccaaaa gatcttttta aagaatttgc agggaagcag
     3841 ctcccagttt gtattggctg ggttgtttga aaaatatcaa actgacaaac tcgggaatct
     3901 gtcaacccac cttgttattc ttaacgatgc tgaggaagcc gcttactttc ataacacgct
     3961 cgagaatctt acccaggcac tcaacctgtt ttattttcct tcatcgttta agaacaggaa
     4021 agatttccgg catttaaaca gcagccatgt gatgttgcgc acagaggctc tcacccacat
     4081 gtcttcatcc acaacggccg atggaaacaa aaaaccagga attattgtca cttacccgga
     4141 agccctgttc gaaaaagtta ttctcccgca aactttagac ggcaatctca tcaacataaa
     4201 ggtgaacgat acgctcgacg tggacaacat catcgaaatg ttcgttactt acggtttctc
     4261 aagaacagac ttcgtttatg aaccgggcca gtttgcgttg cgcggcggca tcctggatat
     4321 ttattcgttc ggaaacgaaa agccgtacag gatcgagttg tttggaaacg acgtggacag
     4381 catacgaatt ttcgatccgg ccacgcagct aagcgaaaga aagctgttgc gtgtgagcat
     4441 tattccgaat gtaaaaacgc aattcagcgg cgatgagaca atttcgctcc tggaattttt
     4501 gcctgatcac actgtcgttt ggctgaagga ctgggatgtt attcaaaaaa gtattgaaga
     4561 gcaacatgaa tacctgggct ctttcctcga acatttgagt ggaaatattt caaaagatga
     4621 aaacggcgac gatgacgtta ctattttcac aaacgcaagt cctcagaatt ttgtaagcgc
     4681 tgatgacatt cttgaacagt tcagcggtcg gcacgttgtc gaattcgggt acaagccaca
     4741 ctttgcgaat tttgagatcg agttgaacac aaagccacag cctgcattca accggcagtt
     4801 cgactaccta attaaagatc tcaaagcaca tgaggcgaaa ggatacagcc tatacatttt
     4861 tgccgaccag gcgcggcaat tggaacggct aaccaccatc ttcaccgatc tcgataccga
     4921 gatccagttt acgcccattg caacttcgat tcacgaaggc tttattgatc acgacctgaa
     4981 ggtggtgtgt tataccgacc accagatatt tcagcgatac cataaataca ggatcaagca
     5041 ggcatacaac aagaacaagg ctcttacgct aagaacgcta aaagaattgc agccgggaga
     5101 ttttgtaacg cacattgatc atggcgtcgg ccggtacagc ggccttcaaa aactcgaagt
     5161 aaacggcaaa ctgcaggaag ctgtgcggat catttataag gacaatgaca tcttgtacgt
     5221 gaacattaat tcgctgcaca agatatcgaa gtacacaggc aaagaaggca cagttccgaa
     5281 aatcaataag ctcggcagcg atgcatggaa ccggcttaag gaaaagacga agacgaaggt
     5341 taaagagatc gcattcgacc tgatcaggct gtatgcgcaa cgaaaggcgc aaccgggttt
     5401 ttcgcacacg ccggacaatt atatgcaaac cgaacttgaa gcatcgttca tctatgaaga
     5461 tacgcccgac caaagcaggg caactgcaga cgtgaaaaaa gatatggaga acgcttcgcc
     5521 gatggaccgt ctcgtctgtg gtgatgtggg atttggtaaa accgaaatcg caatccgtgc
     5581 agcatttaag acgtgtgttg atggaaaaca ggccgctgtc ctggtcccta caacgatcct
     5641 ggcatttcag cattataaaa catttacaga ccggctcagg gattttccgg ttacaataga
     5701 ctacatcaat cgtttcaaat cttcaaaaga aaaaaaggag acgctcaaga aagttgaaga
     5761 agggaaaata gatatcatca tcggcacaca tggcttgctc gcaaaggatg tgaagtttaa
     5821 agaccttgga ttaatgatcg tggacgaaga gcagaaattt ggcgttggcc acaaagaaaa
     5881 gttgaaaaca ttaaaagcga cagtagattg cctcacgctc actgccacgc ctattccacg
     5941 cacgttgcaa ttttctctga tgggcgccag ggatctaagt atcattaata caccaccacc
     6001 aaatcggcag cctattcaaa cagaggtaga agtattcaac gaagattcca tccgcgaggc
     6061 gatctatttt gaaacagaac gtggcggaca ggttttcttt attcacaacc gcgtcattgg
     6121 gctggccgag atggctgctc tcattcaaaa tctctgcccc gatctaagca tcacgtacgc
     6181 gcacggacaa atggaaggtc atgaactcga aacaagaatt cttgatttta tcgatcgcaa
     6241 atacgatgtg ctggtctcga caaatattgt ggaaagtggc gttgatattc caaacgtaaa
     6301 taccatcatt gtaaacaatg cgcaccagtt tgggttgagc gatctgcacc agcttcgcgg
     6361 gcgcgtcgga c
//
LOCUS       DASQJI010000353         3119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_194037,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000353 DASQJI010000000
VERSION     DASQJI010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194037"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1399
                     /locus_tag="VEV83_09900"
     CDS             <1..1399
                     /locus_tag="VEV83_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK45472.1"
                     /translation="SNDTVRLTLQQVVSMAKQRSIASKQATTVKETKYWEWRTYKSNY
                     QPQLSLNGILPGYSKSFIEVQQPDGTVLFQSVHNDNSALNMSFSQSIAATGGTVFGTT
                     QLQRFSDFDRNNVLYNSVPYGVGYSQPLFQFNQLRWDKKIEPLKYDESKQAFVESMEQ
                     IAIAANGYFFDLLLAQVNLKIAATNLDNTKNILRIANEKLEIGKISKNEILQLQLEQL
                     KAEKAVGIAKRDMEIATLNLRTFTGLQSTDKIALALPGSTINMSVETDKVLKEAYENR
                     SDAIAFVRRIAEAKRDVAKAKGDNGLNATLTARLGYSKSAGTISKVYQAPQDQQLMQL
                     EFDIPIMDWGRSKSRTNTAQANLQFTEYAVEQDKQTFTQEIVTQVTLFDMMKDQLVIT
                     AQADSIASEKYEIAQQRYVLGNLSITDLSIAFQEKDQAKRDYISALRDFWGAYYELRY
                     LSLYDFEKDQKIIYQ"
     gene            1410..2126
                     /locus_tag="VEV83_09905"
     CDS             1410..2126
                     /locus_tag="VEV83_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45473.1"
                     /translation="MIDLQPPRKANHNTTAQAIRLKNIEKVYRTDTVETLALNNISLD
                     IAKGEFLSIMGPSGCGKSTLLNIMGLLDAPTKGEVNIDEQKTGGLSDKQLATFRNKKL
                     GFIFQSYHLINDLKVVDNVELPLLYRNMSSLERRKLAEEALGKVGLSNRMKHFPTQLS
                     GGQKQRVAIARAIVGQPEIILADEPTGNLDSNMGNEIMEILLHLNESEGTTIIMVTHD
                     EHMAKRTHRLVRLFDGTQVL"
     gene            2209..>3119
                     /locus_tag="VEV83_09910"
     CDS             2209..>3119
                     /locus_tag="VEV83_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45474.1"
                     /translation="MLKNYFKIAIAVLKRRKFFTFISLFGISFTLTILIVAAAFEEKL
                     VGENYPELNRERSLYINFVQEQNSKYLYTRNGPASYYFLDHYVNTLKTPEKVAIGSLF
                     TPVNTYVNNKKLVINIKYTNEGWWDVLQYQFIEGKPYTQQQIDNGEHVAVISEDLKKD
                     YFGDESNVVGKYIEADNVQYRVAGVVKSVAVTMLDSYADLFAPYTISKTDYRKKDING
                     NYAAIILARSKTDLPKIQQEYANVISKVPTDDKQFDILKSSADSYLVSFMTMNIKSSA
                     GLIITTVIALFVLFIMLLPTLNLVNIN"
BASE COUNT         1016 a          647 c          703 g          753 t
ORIGIN      
        1 gtcgaacgat actgttcgtt tgaccctgca gcaggtggtt tcaatggcta agcagagatc
       61 aattgcatcg aaacaagcaa ctacagtgaa ggagacaaaa tactgggaat ggagaacata
      121 caaatcgaat taccaaccac aattgtcgct gaacggaata ttgccgggtt acagcaaatc
      181 atttatcgaa gttcagcaac cagacggcac agtgcttttc caatcagttc acaacgataa
      241 ttcagcattg aatatgtcgt tcagtcaaag cattgctgcg accggaggaa ctgtgtttgg
      301 cacaacacaa ttacaacgct tcagcgattt tgatcgcaac aatgttttat ataacagcgt
      361 accatatggc gttggttaca gccagccgct ctttcagttc aaccaattaa gatgggacaa
      421 aaaaattgaa ccgctgaaat atgatgaaag caaacaagcc ttcgttgagt cgatggagca
      481 gatagcaata gcggcgaacg gatatttctt cgacctgttg ttagcccagg taaacttaaa
      541 gatcgctgca acgaatctcg acaatacaaa aaacatcctc cgcatcgcga atgaaaaatt
      601 agagatcgga aaaatatcca agaacgagat cctgcaatta caactagaac agttgaaagc
      661 agaaaaggca gtcggcatcg caaagcgcga catggaaatt gcaacgctaa atttgcgaac
      721 cttcaccggt ttgcaaagca ctgataaaat tgcacttgcc ctgccgggat caacgatcaa
      781 tatgagtgtt gaaactgata aggtcttaaa agaagcctac gaaaacagaa gcgatgccat
      841 agcatttgtt cgccggattg cagaagcaaa acgcgatgtg gcaaaagcaa aaggcgacaa
      901 tggtttgaac gcaaccttaa ccgcacggct tggttattca aaaagtgcag gaaccatttc
      961 aaaggtttac caggcgccgc aggaccagca gttgatgcaa cttgaatttg atattccgat
     1021 catggactgg ggacgatcaa aatcgagaac aaacactgcg caggcaaatc ttcagttcac
     1081 cgaatatgca gtggagcaag acaagcaaac atttacgcag gagatcgtga cgcaggtcac
     1141 attatttgac atgatgaaag accagttggt gataaccgca caagccgata gcatcgcgag
     1201 cgaaaaatac gagattgcac agcaacgtta tgtgcttggc aatttgagta tcactgatct
     1261 gagcattgct ttccaggaaa aagaccaggc aaagcgtgat tatatttcag cactgcgcga
     1321 tttctggggc gcatattatg agctgcgata tctttcgcta tacgatttcg aaaaagatca
     1381 aaagatcatt tatcaataaa aacaagatca tgatagactt acaaccacca cgcaaagcaa
     1441 atcataacac cacggcccag gcgatccggt taaaaaacat cgaaaaggtt tatcgaaccg
     1501 atacggttga aacgctggca ttaaacaaca tcagcctcga cattgcgaaa ggagaatttc
     1561 tttcgatcat gggtccttcc ggttgcggta agagtacgtt gctaaacata atgggtttgc
     1621 tcgatgcgcc caccaaagga gaggtaaata ttgatgaaca aaaaaccggc gggctgtccg
     1681 acaagcagct cgccacgttc agaaacaaaa agctcggctt catttttcaa agctatcatt
     1741 tgatcaatga cctgaaagta gtggataatg ttgagctgcc attgttgtat cgcaacatgt
     1801 cttcgctcga aagaagaaag ctcgctgaag aagcgttggg aaaagttggt ttgagcaatc
     1861 gcatgaaaca ttttccaaca caattgtcgg gtggtcaaaa acaacgcgtt gccattgcaa
     1921 gagcgatcgt tggacaaccg gagatcattc tcgccgatga gcctacagga aacctcgaca
     1981 gtaacatggg caatgaaatc atggagatcc tgttgcattt aaatgagtca gaaggaacaa
     2041 cgatcatcat ggtgacgcac gatgagcata tggcgaaaag aacgcaccgg ttggtgaggt
     2101 tgtttgatgg aacgcaggtt ttataagaag ctgtgagcta ttggctacga gctgcgagca
     2161 atgctcaaag ctaacggctc gaagctcaaa gcaataaaaa aaatatttat gcttaaaaac
     2221 tattttaaaa tagcgatcgc ggtgttgaag agaaggaaat ttttcacctt tatcagcctg
     2281 tttggaatca gctttacgtt gaccatctta attgtcgcgg cggcgttcga agaaaagctt
     2341 gtgggtgaaa attatcctga attgaacagg gaacgttcgc tgtatatcaa tttcgtgcag
     2401 gaacaaaatt caaagtattt gtacacgcga aacggaccgg cgagttacta cttcctcgac
     2461 cattatgtga atactttgaa aaccccggag aaagttgcca ttggttcttt gtttacaccg
     2521 gtaaacacct atgtgaacaa taaaaagctt gtcataaata tcaagtacac taatgagggt
     2581 tggtgggacg ttctgcaata ccagtttatc gagggcaaac cttacaccca gcagcagatc
     2641 gacaacgggg aacatgttgc ggtgatatca gaagacctga aaaaagatta tttcggcgat
     2701 gagtcaaatg ttgttggaaa atatattgaa gctgataatg tacaatatcg cgttgccggc
     2761 gtagtgaaaa gcgtcgctgt tacgatgctc gattcttatg ccgatctttt tgcaccttat
     2821 acaatttcaa aaacggatta caggaaaaaa gacatcaatg gtaattatgc agcgatcatt
     2881 ctcgctcgtt caaagaccga ccttccgaag atacaacagg aatacgcaaa tgttatttcg
     2941 aaagtcccga ccgacgataa acagttcgac attctgaaaa gctcggccga cagttacctc
     3001 gtaagtttta tgaccatgaa cattaagagc agtgccggcc tcatcattac gactgttatc
     3061 gcgttgtttg ttttgttcat catgttgctt cctaccttga accttgtgaa catcaatat
//
LOCUS       DASQJI010000354         5906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1883793,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000354 DASQJI010000000
VERSION     DASQJI010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5906
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1883793"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VEV83_09915"
     CDS             complement(<1..1022)
                     /locus_tag="VEV83_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase PurH"
                     /protein_id="HYK45475.1"
                     /translation="MQKKIKSALISVFYKNGLDAVVKQLSDLGIKIYSTGGTQNFIEQ
                     LGIECEAVENLTSYPSILGGRVKTLHPSVFGGILGRRDLQQDRTEMEQYNIPEIDLVI
                     VDLYPFEEALKQQQQKASSSGENLNESAIIEKIDIGGPSMIRAAAKNFKDVLVVAAKE
                     DYAPLVDLLHQQNGETNLGQRKDYAAKAFEVVMNYDIAISNYFNEQIFNPFHGKQSLR
                     YGENPHQHAIFYGDLKEVFNQLHGKELSYNNLVDVDAAIQLISEFNGSPFHPWRGAGG
                     EVFAIIKHTNVCGVAERPSVKESWDAALAGDPESAFGGVLVTNGTVDAATATAINEIF
                     FEVLIAP"
     gene            complement(1140..3236)
                     /locus_tag="VEV83_09920"
     CDS             complement(1140..3236)
                     /locus_tag="VEV83_09920"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HYK45476.1"
                     /translation="MPFHPAPALKPYPFVRLVFALISGIALSWYLDPSFNSVISIGIA
                     VACLVAAFSLMPESKRFALHWLRGCLILLLFAWAGMLLTWRQNIENNSSWFGQVYKPG
                     DPLLLTIEEPLDEKPKSYKAVATVNAVYASENSWSNSEGKVLLYFKKDSAPQIDYGSQ
                     IIVRKPLQEIQNSGNPAALDYKRYCLFQGITHQAFLSRDDYTVLPNNNGNLFRRFLFL
                     TRNAALRTIQKNIHSQKELGIAEALLIGYRNDLDKDVVQAYSDTGVVHIIAISGLHIG
                     VIYSLLVALFSIVRSSRFKKWFQPVLILLVIWGFTLLAGAAPSISRAAVMFTCVLFGK
                     LLARHGNVYNTLAASAFILLAWNPFYLWDVGFQLSYAAVLSISLFFNPLYKLLYIRNK
                     MLRMMWQLTALTTSAQILALPLVVFHFHQFPLLFLLSNLVAVPLSSFILFGELLLFCF
                     SWLPAAASFIGDVLQFMIGWMNSFIEHIDRIPFSVADGLHVLIWQFFLLYFFIIGCST
                     WLFRKTIPALIAAMASLITFFILVDVNSTYHKQQQKLVIYNVPHHSAIDFISGSACSF
                     AGDSVVLADASIRNFNLKAANIRDHVYNAYFPNTLPNVNDVILQFGPKKVVLLDCPLS
                     IPAKVEKKIPVDVIVICRNANISMTDLQALFDVDQIVVDGSNSQWKTAQWKKDCEQLH
                     LRFHSVASDGAFTMKI"
     gene            3390..>5906
                     /locus_tag="VEV83_09925"
     CDS             3390..>5906
                     /locus_tag="VEV83_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HYK45477.1"
                     /translation="MANRLKKKTAKPPSAEKLNPDNEEEVSVQEVVKDERTAKIMGAV
                     SLLFSAFLFIAFLSYFFTWQEDQDKVFQFGIKIFATHDVQVENLLGVLGAYISYTFIN
                     NGFGVASFLFCTFFFVLGVNLLFGQKIFNVPRNLRYLIAGLIVLSVAFAFVFRNSEFN
                     WGGNAGKLMTDWLVKWIGSIGTGALLTLTVLAYIIWRFDPEFKLPKRKSKAVMPAIEE
                     PVSSPLFNAEYEEVFYKPGEKASPAVEASVKDDTLVSNNKLKNEGNVVVIMPEAKPDD
                     ANIFTISQKEPVYEPLVDELTKHGVNDVPELSEDDLKGIKPKKVKPAVDMELEIKDTS
                     EQIGDESATPAKPQTSNLKPQTVNYEPTLDLSNYKYPSLDLLEAHGSEKIVHDPAELE
                     NNKNQIISTLKNYDIQIQRISATVGPTVTLYEIVPAPGVRISRIKNLEDDIALSLAAL
                     GIRIIAPIPGKGTVGIEVPNVRKTVVSMRTLLASEKFQINNFSLPIAIGKKIDNENFI
                     VDLATMPHLLMAGATGQGKSVGINTLLVSLLYKKHPSQLKLVLVDPKKVELSLYRVIE
                     KHFLAKLPGEDEPIITDTKKVIHSLNALCTLMDIRYDLLKEASCRNIKEYNEKFISRK
                     LNPQKGHEFLPFIVLVIDEFADLIMTAGKEIEMPIARLAQLARAVGIHLVIATQRPSV
                     NIITGTIKANFPVRIAFKVSSKIDSRTILDQGGAEQLIGKGDMLISHNGEITRLQCAF
                     VDTPEVEEVCEFVGQQQGYPQAFQLPEYVDEREMEGKDFDLSDRDPLFEEAARLIVQN
                     QMGSTSLIQRRMKLGYNRAGRLMDQLEQAGVVGPNLGSKAR"
BASE COUNT         1715 a         1286 c         1381 g         1524 t
ORIGIN      
        1 ggagcgatca gcacttcaaa aaagatctcg ttgatcgcag tcgcagtcgc ggcatccaca
       61 gttccgtttg tcacgagcac tcctccgaac gcactctcag gatcaccagc gagcgcagca
      121 tcccagcttt ccttcactga aggtctttca gcaacgccgc aaacgtttgt gtgcttaatg
      181 atcgcgaaaa cctcaccccc ggctcctctc cacgggtgga aaggggagcc gttgaactcg
      241 ctgatcaatt gtatagccgc atctacatca acgaggttat tataagaaag ctctttgccg
      301 tgcagttggt tgaatacttc ttttagatcg ccataaaaga ttgcatgctg atgaggattc
      361 tctccatatc gcagcgattg ttttccatgg aacggattaa aaatttgttc gttaaaataa
      421 ttgctgatgg caatgtcgta attcattact acttcaaacg cctttgctgc atagtctttt
      481 cgctggccta ggttcgtctc accattttgt tggtgcaata gatcaacaag gggggcataa
      541 tcttcttttg ctgcaacaac gaggacatct ttgaaatttt tcgcggctgc gcggatcatt
      601 gacggacctc cgatatcaat tttttcgatg attgctgatt cgttcaaatt ttctccagat
      661 gacgaagctt tttgttgctg ctgtttgaga gcttcctcaa acggatacag gtcaacgatg
      721 acaagatcga tctcagggat gttgtactgt tccatctctg tcctgtcctg ttgcaaatct
      781 cttctcccta agattccacc aaaaacagac gggtgcaagg ttttcaccct tccccccaat
      841 atcgacggat aggatgtgag attttcaacg gcttcacatt cgatcccaag ctgttcaata
      901 aagttttgcg tgcccccggt tgaataaatt tttatgccga gatccgacaa ctgttttacg
      961 acggcatcca atccattctt ataaaaaaca gaaatgagag cgcttttgat ctttttttgc
     1021 ataatgcgat gtttgctttg cagatcgtcg ccgttgcatg tttctcactt tgcttgaaat
     1081 gacaacgggc aatgtctttc atttctaaag cagaaattac aaatcgcgag gattgttaat
     1141 catattttca tcgtgaaagc gccatcgctt gccacggaat gaaagcgcaa atgtaattgc
     1201 tcgcagtctt ttttccattg cgcggttttc cattgtgaat tacttccgtc aactactatt
     1261 tgatcaacgt cgaaaagcgc ctgaagatca gtcatcgaga tattggcatt cctgcagata
     1321 actatcacat cgacgggaat ctttttttca acctttgcgg gaattgaaag cggacaatcg
     1381 aggagaacaa cttttttagg accaaactga agaatgacat cgttgacgtt tggcaacgta
     1441 ttagggaagt aggcgttgta cacgtgatct cttatgttcg ccgcctttaa gttgaaattt
     1501 cggatagacg cgtcggccaa aaccactgag tcgccagcga aagaacaggc actgccagaa
     1561 atgaaatcaa tggctgaatg gtgaggcaca ttataaatta cgagtttttg ttgttgttta
     1621 tggtatgtgg agttgacgtc aacgaggata aagaaagtaa taagcgatgc catcgcagct
     1681 attaaagcgg gaattgtttt tcgaaacaac caggtgctgc agccgataat gaaaaagtaa
     1741 agcaagaaaa attgccatat gagtacatgc aatccatcgg caacagaaaa cgggattctg
     1801 tcaatatgtt caatgaaact attcatccat ccgatcatga attggagcac atcgccaata
     1861 aacgaagcgg cagcaggcaa ccaggaaaag cagaacaaca agagttcgcc gaaaagaatg
     1921 aaacttgata atggcaccgc gaccaaattg ctcaacaaaa acaagagggg gaactggtga
     1981 aaatgaaaaa caacgagcgg aagtgcaagt atctgtgccg atgtggttag ggcagttagc
     2041 tgccacatca ttcgcaacat cttgttacga atgtatagca gcttatataa tggattaaag
     2101 aaaaggctga tgctaagcac tgccgcgtag gaaagctgga aaccgacgtc ccataaataa
     2161 aacgggttcc aggccaggag tataaatgcc gaggctgcga gtgtattgta gacgtttcca
     2221 tggcgggcca acagttttcc gaagagaacg catgtaaaca tcactgcggc tcttgaaatg
     2281 gagggtgccg cgccggccag caacgtaaag ccccagatga caagcaaaat aagaactggt
     2341 tgaaaccatt ttttaaaccg cgatgatctc actatgctga ataacgcaac gagtaacgag
     2401 tagatcacgc cgatatgcaa gccgcttatt gcaatgatat gcacaacgcc agtgtcgctg
     2461 taagcctgca cgacgtcttt atccagatcg ttacgataac cgatcaataa cgcttctgca
     2521 atgcccagtt ctttttgcga gtgaatgttt ttttgtatcg ttcgtaaagc ggcgttccgg
     2581 gttaaaaaca aaaaccgcct gaaaagattt ccattgttgt ttggtaagac ggtgtaatca
     2641 tctctgctta aaaaagcctg gtgtgttatt ccctggaaga gacaatatct tttgtagtca
     2701 agcgccgccg ggttgccgct gttttgaatt tcttgtaacg gtttgcgaac aattatttgt
     2761 gagccataat caatttgagg cgcgctgtct tttttaaaat agagtaatac ttttccttca
     2821 gagttgctcc agctgttttc gctggcataa acagcattga ctgttgcaac agctttatac
     2881 gattttggtt tttcgtccag cggttcttca atggttaata acaacggatc cccgggtttg
     2941 tatacctgtc caaaccagga agaattgttc tcgatgtttt gccgccatgt caacaacatg
     3001 cctgcccatg cgaataacag aaggatcaag catccacgca gccagtgaag cgcaaatctt
     3061 tttgattccg gcatcagtga aaacgccgca acaaggcaag ctacggcaat gccgatggaa
     3121 attactgagt taaacgacgg atcaagatac cagctaagag cgatgccgct gatcaaagcg
     3181 aaaaccaatc gcacaaacgg gtatggtttt agggcaggtg cagggtgaaa gggcatgatt
     3241 aaagttaatg aaattttcat ggaatctcaa tgcgtcatct gcaggaagaa atttttcgag
     3301 atcggctaac ctcgctcact aacaaatcgt ggagaacctg catactttct ctccatcaac
     3361 tccgttatat ttgttgctgc gagaatgata tggccaatcg tttaaagaaa aaaactgcta
     3421 aaccgccgag tgcggaaaag ttgaacccgg ataacgaaga agaagtatct gtgcaggagg
     3481 ttgtgaaaga cgagcggacg gcaaagatca tgggcgctgt aagcctgctg ttcagcgcct
     3541 ttctgtttat cgcatttctt tcctattttt ttacctggca ggaagaccag gataaagttt
     3601 tccaattcgg aataaaaata tttgcgacac acgatgtaca ggtcgaaaac cttttgggtg
     3661 ttttaggtgc atacatttcg tacacgttta tcaacaacgg ttttggagtt gcgtcgttct
     3721 tattctgcac tttctttttt gtacttggcg ttaaccttct attcggacaa aaaatattca
     3781 atgtgccgcg caacctgcga tacctcatcg cgggattgat cgtcttaagc gttgcattcg
     3841 cattcgtatt tcgcaacagc gaatttaatt ggggaggtaa tgccggtaaa ctcatgaccg
     3901 actggctggt gaaatggata ggcagtattg gtaccggcgc cttgcttacg ctgactgtgc
     3961 tggcttatat catttggcgt tttgatccgg aattcaaatt gccgaaacga aaatcgaagg
     4021 cagtaatgcc ggctatagaa gaaccagtct cttctccact tttcaatgct gaatatgagg
     4081 aagtttttta taagccggga gaaaaagcgt cgcccgctgt tgaagcatcc gttaaagacg
     4141 acacgctagt cagcaacaac aaattgaaaa atgagggtaa tgtggtagtc attatgcccg
     4201 aagcaaaacc tgacgatgcg aacatattta ccatcagcca gaaagaacct gtgtatgaac
     4261 cgttggttga cgagcttaca aaacatggag tgaatgacgt gccggaatta agtgaggatg
     4321 acttgaaggg catcaaacca aagaaggtga agccggctgt agacatggaa ctcgaaataa
     4381 aagatacgag cgaacaaata ggtgatgaat cagcaacacc ggcaaaacct caaacttcaa
     4441 acctcaaacc tcaaacggta aactacgaac ccacacttga tctgagcaat tataaatatc
     4501 cctcgctgga tctgctcgaa gctcacggca gcgagaagat cgtgcatgat ccggccgaat
     4561 tagagaacaa caagaaccag atcatttcaa cgctcaagaa ttacgatatt caaattcagc
     4621 ggatcagcgc gactgttggt ccgacagtta cattatacga aatagtgccg gcgcccggtg
     4681 tgcgcatcag ccggataaaa aatttggaag atgacatcgc tttgagcctc gctgcgcttg
     4741 gtatccgcat tattgcgcct atccccggca aaggaaccgt cggcattgaa gtgccgaatg
     4801 tgcggaagac ggtcgtgagt atgcggacac tgttggcttc agaaaaattt cagatcaata
     4861 atttttccct gcccatcgca attggaaaaa agatagacaa cgaaaatttt attgtcgatc
     4921 tcgccacgat gccgcatctt ctcatggcgg gcgccacagg acagggaaag tcggtcggca
     4981 taaacacact gctggtatcg ctgctatata aaaaacatcc atctcaacta aagctcgttt
     5041 tggttgaccc aaaaaaagtg gagcttagtt tataccgcgt tatagaaaaa catttcctgg
     5101 caaagctgcc gggcgaagac gagcccatca ttacagacac aaaaaaagtg atccatagcc
     5161 tgaatgcgtt gtgcacgctc atggatattc gttatgacct gctgaaagaa gcaagctgcc
     5221 gcaacataaa agaatacaat gagaagttta taagccgcaa actgaaccca caaaagggtc
     5281 acgaattttt accgttcatt gttttggtga tagacgagtt tgcggatctc atcatgactg
     5341 ccggtaagga gatcgagatg ccgatcgcca gacttgctca gcttgcgcgt gcggtgggga
     5401 ttcacctcgt aattgcaaca caacggccat ccgtaaatat tattacggga actattaagg
     5461 caaatttccc ggtgcgtatc gcttttaaag tatcgtcgaa gatcgacagc cgtacgatcc
     5521 tcgaccaggg cggcgccgaa caattgatcg gcaaaggcga catgctgata agtcataatg
     5581 gtgagatcac gcgtttacag tgcgcttttg ttgacacgcc ggaggttgaa gaagtgtgcg
     5641 aatttgtcgg gcaacaacaa ggatatcccc aggcttttca attgccggaa tatgtggacg
     5701 aaagagagat ggagggaaag gattttgatc tttcagaccg ggatccttta ttcgaagagg
     5761 ctgcaagact tatcgtacaa aaccagatgg gaagcacgtc gttaatacag cgtcgaatga
     5821 agttgggtta taaccgcgca ggacggctga tggaccagct cgaacaagca ggcgtggtgg
     5881 gtccgaatct tggaagcaag gcaaga
//
LOCUS       DASQJI010000355         1926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_961839,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000355 DASQJI010000000
VERSION     DASQJI010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961839"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..1136)
                     /locus_tag="VEV83_09930"
     CDS             complement(join(40..870,873..1136))
                     /locus_tag="VEV83_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611505.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HYK45478.1"
                     /translation="MKKSKFTEAQIVFALRQAENGIKVDEVCRKLGISETTFHNWKKK
                     YAGLGVGELKKLKELQDENQRLKQIVADLSLDKLMLQDVLKKNVTTPQLKLQAQFLID
                     QYQVSERKACMAVELRQNTFRYVLHSRDDRPVRARIKEIAAVRIRYGQERVFKLLRRE
                     GWPDNHKRVRRIYREEGLNLRLKRPRKAKAAKSRMTRPEPSGVHECWAMDFVHDQLFD
                     GRKIRALTVVDIFSRFCLTINVQKSFTSTSVAQIMETLKIQYAIKPKAIRLDNGPEFI
                     GKELDNWASFNNVTLDFSRKGKPTDNAFCESFNGTFRDECLNTTWFLSVEDAVEKIEA
                     WRVEYNTFRQHSSINDLTPDHMMKKHQQKP"
BASE COUNT          555 a          410 c          343 g          618 t
ORIGIN      
        1 tgaagccttc ccaatttacg ctatattcta aagttgagtt cagggctttt gttgatgctt
       61 tttcatcatg tggtccggtg ttaaatcatt gatcgaacta tgttgcctga acgtattgta
      121 ttccactctc caggcttcta tcttttccac ggcgtcttcc actgataaga accaggttgt
      181 attaagacat tcatctctga acgtgccatt aaatgattca caaaaggcat tgtctgttgg
      241 ctttcccttc ctggagaagt ccaaagttac attattaaaa gatgcccagt tgtcgagctc
      301 tttgccgata aattcagggc cattgtcaag ccggatagcc ttgggtttaa tagcgtattg
      361 aatctttaat gtctccatta tttgagctac actagtgctc gtaaaggatt tctgcacgtt
      421 aatagtaaga caaaaacgac taaagatatc aactacagtt aatgccctga tttttcttcc
      481 atcgaaaagc tggtcatgta caaaatccat tgcccagcat tcatgaacac cagaaggttc
      541 aggccgtgtc attctgcttt tcgctgcttt ggccttcctc ggccttttta gtcgcagatt
      601 aagaccttct tccctgtata tacgccgtac acgtttgtgg ttatccggcc atccttcacg
      661 cctgagtaac ttaaaaacac gctcctgacc ataccggatc cttactgcag caatctcctt
      721 tattcgcgct cttactggtc tgtcatcacg actatgaagc acatatcgaa aagtgttttg
      781 acgaagctct acagccatac aggctttccg ttcagatact tgatattgat cgatgagaaa
      841 ctgcgcctgt agcttcaatt gaggtgttgt cagacatttt tttttaaaac atcctgcagc
      901 attaatttat ctaaactaag atcagctaca atttgtttca aacgctggtt ttcatcctga
      961 agctctttga gctttttaag ctcaccaacc cctaaacccg catacttctt cttccagttg
     1021 tgaaaagtag tttcactgat ccccaacttc ctgcaaacct cgtcaacctt aattccattt
     1081 tccgcctgcc gaagcgcaaa cacaatttgc gcttccgtga attttgactt cttcatgcaa
     1141 ttatttactt ttttaagtta tgaataattg cccgttttac tcaactttaa cgtttggcga
     1201 ttttaaggga agagatcact tgtctgcaag cttgaattcg gatatagaat ctttattaaa
     1261 agaaaaatga agtcaaagcc aaaaagaaag taaagattac aaaaattgat gtcgctattt
     1321 gtaatccaaa taaaaaatat agcgcttttg aagctttttt tgttaacgag tagccggtta
     1381 atgctgtcgc ggtcaaacaa cataatatta gaaccagtcc gctataacgt ttaatagcag
     1441 tatcaatgtt taattgattc atatagttcc tatctaaaac tacaaatgat tcgtcatgag
     1501 atgttagccc ttgcattata aaaaaaataa caaatccagc ggtaaaaact gccatcgaat
     1561 atttgactgt tcttgtcaac tttaaatgtg tttggcttgc attatttatt cttcaaatga
     1621 ggcgttgttc aaaaaatagc aaccgtatct tttcctttgt caatctgcca aaataagaat
     1681 tattaaaatt agacgcggtg tctgttagta tggcgtgcaa cgacgatcag gtatttgcga
     1741 aggctgggaa atagaatttc gtcaagcttg gctaaccgat gatgaaaata gaaataaaag
     1801 ttgatgattc gcatatagtc gaaagtagat tgccctgccc gaacaactga acaaaaagct
     1861 gaaactgccg aaccacggct tctgaacgcc cagcttttgc aaatactttt gttgtacgca
     1921 gccttt
//
LOCUS       DASQJI010000356         2492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1267963,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000356 DASQJI010000000
VERSION     DASQJI010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267963"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..352
                     /locus_tag="VEV83_09935"
     CDS             47..352
                     /locus_tag="VEV83_09935"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HYK45479.1"
                     /translation="MFIYNVTSKINWPIHEAWMEWMTNEYIPAIMATHCFTDFQLLKL
                     HEQDDAEGPTYVAQYFAASKSQYNRYIELFAPKFEQDGIAKWGNNFMAFASLLEVVK"
     gene            503..1147
                     /locus_tag="VEV83_09940"
     CDS             503..1147
                     /locus_tag="VEV83_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Error-prone repair protein ImuA"
                     /protein_id="HYK45480.1"
                     /translation="MNINISSRLPSFLHQALATSCMHEILSASPEDVAATNGFVTALL
                     SRIMPPGAVYAWISSSRTLFPPALKMFQLEPDQFIFIDLKHEKDVLPAMEDALKCERF
                     ATVLGELRDISFSQSRRFQLATEQSKVTGFILRHQPRLLNTLACVSRWRITSLPSSTD
                     DEIPGVGFPRWNIELLKIRNGKPGAWKLEWSANHFNEIRENVFLLEEQQRRKTG"
     gene            1149..>2492
                     /locus_tag="VEV83_09945"
     CDS             1149..>2492
                     /locus_tag="VEV83_09945"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HYK45481.1"
                     /translation="MQKRFAAIWFRHLKTDWMIHRKPELKNIPFVLALPDHGRMRITE
                     VSAIAKSKEIYPGMVVADARVIIPSLTRLDDKQGLSESLLKKVCAWCIRYTPVAAIDL
                     PDGLILDVTGCPHLWGGEESYLGNILSRLKTFGFHVRAAIADTIGAAWAVCRYAKQKA
                     IIKPGKQSEALMQLPPAALRLDIDTLERFQKLGLYQVCSFITMQRSALRRRFGQQLLL
                     RLDQALGNEEEFIQPLIPVEPYHERLPCLEPIQTATGIEIALQRLLESLCNRLKHDGK
                     GLRVASFKCYRIDGKTEQISISTNHPSNHSDHIFKLFELQISSIEPAFGIELFTLEAS
                     KVEVSTPLQETLWTPNSSLESKEVSELLDQLENKFGGNIIHRYLPDEHHLPERSIKLA
                     ASLKEKPAIAWRNDRPRPIQLLPVPHAVEVMAPIPDYPPMTFRYKGRLHKVEKADG"
BASE COUNT          732 a          526 c          538 g          696 t
ORIGIN      
        1 gtgatcattg tccggtattt cttgagataa acatttagat tcttacatgt tcatttataa
       61 tgttacaagt aaaataaact ggcctatcca cgaggcgtgg atggaatgga tgacgaatga
      121 atatataccg gcgatcatgg caacgcattg cttcacagac tttcagcttc taaaattaca
      181 tgagcaggat gacgcagaag gacctactta tgttgcgcaa tattttgctg caagcaaatc
      241 gcagtacaac cgctatatag aattatttgc tcctaaattc gaacaggatg gaattgcaaa
      301 atggggaaat aattttatgg ctttcgcttc cctgcttgag gtagtgaaat aaatacaatt
      361 tttccctggt aaatttttgt tggcacattt ttttagctgt actttgctaa atactttagt
      421 atagatgggt ggctgtacaa atgatattat caaacagctt caaaaagcta ttctcccatg
      481 gcagggcttc aaaagccttt ccatgaacat caatataagc agtcgcctgc cgtcttttct
      541 acaccaggcg cttgccacca gttgcatgca tgaaatatta agcgcttcgc cggaagatgt
      601 agcggcgacc aacggttttg taacagcttt acttagccgc atcatgccac caggcgccgt
      661 gtatgcgtgg ataagttcat caaggacatt atttccgcct gctttgaaaa tgtttcagct
      721 ggaacccgac caatttattt ttatcgattt gaaacatgaa aaagatgtgc tgcccgcgat
      781 ggaagacgca cttaaatgtg aaagatttgc tacggtgttg ggtgaattac gcgacatcag
      841 tttttcacaa tcaaggagat tccagttagc tacagagcaa agcaaggtca caggttttat
      901 tcttcgtcat caaccgcggt tgctcaatac tttggcctgt gtatctaggt ggcgcatcac
      961 ctctcttccc agttccacag atgatgaaat tcccggtgtt ggttttccac gttggaatat
     1021 cgaattactt aaaatccgaa acggaaaacc aggcgcctgg aaactggaat ggtcagcaaa
     1081 ccacttcaat gagatcagag aaaatgtttt tctactagag gaacagcaac gacgaaaaac
     1141 aggataaaat gcagaagcga tttgcagcga tatggtttcg tcatttaaag acggattgga
     1201 tgatccatcg taaaccggaa ttaaaaaata ttcctttcgt gctggcactc cccgaccatg
     1261 gacgcatgag gataacagaa gtaagtgcaa tagcaaaatc aaaagaaata tatccgggaa
     1321 tggtagtggc ggatgcaaga gttattattc catctttaac aagacttgac gataaacagg
     1381 gcctttctga gagcctgctt aaaaaagttt gcgcatggtg tatccggtat acacctgtcg
     1441 cagcaattga tcttcctgac ggattgatac tggacgtaac cggctgtcct catttatggg
     1501 gtggtgaaga atcgtatttg ggaaacattc tttcaagatt aaaaacgttt ggctttcatg
     1561 tgcgtgctgc catagcagat actattggcg ccgcatgggc tgtttgccgg tatgcaaaac
     1621 agaaagcgat catcaaaccc ggcaaacagt ccgaagcttt gatgcaattg ccaccggctg
     1681 ctttgagatt agacattgat acgcttgaac gttttcaaaa acttggactg taccaggtct
     1741 gcagttttat aaccatgcaa cgttctgcac ttcgtcgtcg ttttgggcag cagttactgt
     1801 tgcgcctcga ccaggcattg ggtaacgaag aagaattcat tcagccgctg ataccggttg
     1861 aaccatacca cgaacggttg ccttgtttag agcctattca aacagctaca ggtattgaaa
     1921 ttgctttgca acgtttattg gaatctttat gcaatcggct taaacatgat ggaaaaggtt
     1981 tgcgtgttgc ttcattcaaa tgttatcgca tcgatggaaa aacagaacag atctcgatca
     2041 gcaccaatca tccatcaaat cattcagatc atattttcaa actttttgaa cttcaaattt
     2101 catccatcga acctgcattc ggtatcgagt tatttacact tgaagcctca aaagttgaag
     2161 tcagcacacc gttgcaggaa acactttgga caccgaacag tagcctcgaa agcaaagaag
     2221 tatctgaatt acttgatcag cttgaaaata aatttggcgg gaatatcatt cacaggtatt
     2281 tacctgatga gcaccatttg cctgaacgct ccattaaact tgctgcttcc ctcaaggaaa
     2341 aaccggctat tgcatggcgt aacgacaggc cgcgtcctat acaactttta ccagtgcccc
     2401 atgcagttga agtaatggca ccgattcctg attatcctcc aatgaccttc cggtataaag
     2461 gcaggctgca taaggttgaa aaagcggatg gc
//
LOCUS       DASQJI010000357         6943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2344309,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000357 DASQJI010000000
VERSION     DASQJI010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6943
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344309"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1428)
                     /locus_tag="VEV83_09950"
     CDS             complement(<1..1428)
                     /locus_tag="VEV83_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45482.1"
                     /translation="MKSIFTCLALLIAGVSYVANAQYLQFVENKGQWDKSVKFKSDYK
                     GGALFLQSSGYKVLLHNPDELRNVADFFGGHLDSTERKKMPAGAKGVLLHSHLYEINF
                     LDAAANAEVVPDKPLAMHTNYFIGSDSSKWATGCRVYNGVTYKDVYKNVDVRYYSDNG
                     NLKYDIIVKPGADISKIAMQFNGLDKLEVNKYGNLTMKTSVGDVYQAIPSCYQVIKNL
                     KSKIKAAFDLKGNVIHFKLADYDKTATLIIDPTEIFSTYVGSTSDDWGYTATYDNAGN
                     FYAGGIAFDNGFPYRPVGGYDQTFGGGDGSEGSSLAYDISLIKFNPTGNTALYATYLG
                     GNGDEQPHSLVVDTRGNLIISGRTTSPNFPVTVGNFGKGGYFDIFLARLSPDGTALLA
                     SRKFGGTGSDGVNIAPKYSSNPPEGISSIRRNYGDDARSEVITDDRDNIYLASCTQSS
                     DFPLTPNAFRNSLGGGQDGVFIKASS"
     gene            complement(1481..3601)
                     /gene="recG"
                     /locus_tag="VEV83_09955"
     CDS             complement(1481..3601)
                     /gene="recG"
                     /locus_tag="VEV83_09955"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HYK45483.1"
                     /translation="MCCISAISSILTSPIEYLKGVGPLRGDLLKKELGIFTFADLLQH
                     YPLRHIDRTHVDKIGSIGEGTEFIQVIGKITEIAAVGQRGAKRLTAWLEDGTGVVELT
                     WFQGVQWIQKSLQEGETYLVYGRSGFFNGKLQITHPEFEVFKPGLETGKSFLEPVYPT
                     TEKLKAKGLSARQISKLTAVLLAQLSERDLPENIPSPIRTQLNLKGRYDSIVGIHFPP
                     SHDAYVEALYRLKFEELFMAQVRLGMIRGQRHRRSHGIVFEKVGSLFNSFYTDHLPFE
                     LTNAQKRVIKEIRGDTAKGHQMNRLLQGDVGSGKTIVALLIMLLAADNGYQSCMMAPT
                     EILAQQHFESLRSLLKGLPIEIRLLTGSTKAAQRKKILAELTDGSAGILVGTHAVIEA
                     VVQFRKLGLAIVDEQHRFGVAQRAQLWKKSPVPPHVLVMTATPIPRTLAMTAYGDLDY
                     SIIDELPPGRQPVTTVHRYETKRAAVMDFVKEEIARGRQAFFVYPLIEESEKLSYENL
                     MAGYEQVKSFFPEHLYSISMVHGRMPADQKEANMQRFKDRDTQIMVGTTVIEVGIDIP
                     NASMMVIESAEKFGLSQLHQLRGRVGRGNDKSYCILLSAPKLSFEAKERLRTMCTTID
                     GFKIAEKDLELRGPGDIEGTKQSGMLNFKLASIVNDKELLTLAKEHAEKVLADDEILA
                     KPVNAQLKAFLLSQKGKTAWSKIS"
     gene            3758..4849
                     /locus_tag="VEV83_09960"
     CDS             3758..4849
                     /locus_tag="VEV83_09960"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HYK45484.1"
                     /translation="MYDDSFLRNKLLQREQQNALRTLKLPEGKVDFSSNDYLGIVKNN
                     LLHDKIAVGLKTGSTGSRLLSGNNALVEKTEKQIAQFHDAEAALIFNSGYDANVGLLS
                     CIPQKNDTVFYDQLCHASIRDGIRLSFAQSFSFPHNNIHELEKKMKAATGNRFVVTES
                     VFSMDGDFCPLAALVSVCKKYNAHLVIDEAHATGIVGENGEGLTQNTGLHREVFCRIH
                     TFGKACGCHGAAVVGSTQLRDYLINFARSFVYTTALPEHSVAAISASYHTFPSLNNER
                     SKLKMLIERFQQARLSFEKLVSSTPIQVVIIPGNGAVKTVAEKLQHEGLDVRPILYPT
                     VPAGKERLRIVLHAFNTTAELEKLIELLS"
     gene            4855..6243
                     /locus_tag="VEV83_09965"
     CDS             4855..6243
                     /locus_tag="VEV83_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYK45485.1"
                     /translation="MQQTLPKKLLEGLEGIEGFDRKNFEAVHESGEQITSIRFNPEKF
                     QHLVPGKNYYHPSFKLGEQVPWCEHGSYLSERPSFTLDPLLHAGAYYVQEASSMFLWE
                     VLRRTAGAGSNVKVLDLCAAPGGKSSLLASWFMNGLVVSNEVIKSRVSILYENMTKWG
                     ASNVVVTNNEAADFQRLKNYFDVIVVDAPCSGSGLFRKDPDAIGEWSENMVELCSQRQ
                     QKIVSDIFPSLKEEGILIYSTCSYSPEEDEEISDWLKDHFPVDSIQLNLDPEWNIVET
                     RSSKHHAFGYRFWPHKINGEGFFIAAFRKSEAAFENSKQRRASLRKTGASESSLVANF
                     LCTEVDCFLFSQNENIHAIKAAWEGDIALLQKTLYLKKAGIRVGQIKGNQLVPNHELA
                     LSTIVNKNVQRTALSRDEALQYLRKKELDITGVSGGWALCTCYNFPLGWVKFLHNRVN
                     NYYPTEWRILKH"
     gene            6260..>6943
                     /locus_tag="VEV83_09970"
     CDS             6260..>6943
                     /locus_tag="VEV83_09970"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HYK45486.1"
                     /translation="MRRFRFIVPVLMSVLCVQILSAQNNYFTHKLKEGETLSALAKQY
                     NTNVGDIMRLNGMHADTKLVYGSTIRIPAAEVQTAKQQKSIVPQPKPEVQQKPQPVST
                     DAVTHRVAQGETLYSISKRYNVPAEQIKAWNHLPDNSVKLDMDLIVGTKQSNTVVSSS
                     QKQSPKVEEKTSALVVTETQSKPEVDVSESKTADVSQPNVETSKSQNTNAVNLPTADA
                     ASMNEHGYFA"
BASE COUNT         1896 a         1626 c         1557 g         1864 t
ORIGIN      
        1 ggaactggct ttgatgaaca cgccatcctg gccaccgcca aggctgtttc taaatgcgtt
       61 cggtgtcagg gggaaatcac tggattgggt acaactggct agatagatat tgtcccggtc
      121 atcagtgatc acttcgcttc tggcatcgtc gccataattt ctgcggatag aagaaatgcc
      181 ctccggagga ttacttgaat atttcggagc aatatttaca ccatcggaac ctgtaccgcc
      241 aaattttcga gatgcgagca gagctgtgcc gtccgggcta agccttgcaa ggaaaatgtc
      301 gaagtagcca ccttttccaa agttgccaac cgtgaccggg aaatttggtg aggttgttcg
      361 ccccgaaatg atgagattgc cgcgcgtatc aaccactaag ctgtggggct gttcatcgcc
      421 atttccgccg agataagtgg cataaagtgc agtgtttccg gtaggattaa atttgatcag
      481 cgaaatatca tacgccaggc ttgacccttc acttccgtct ccgccaccga acgtttgatc
      541 atatccacca acgggcctgt atggaaagcc attgtcgaac gcaatccctc cggcgtagaa
      601 atttcctgcg ttatcataag ttgcggtgta gccccaatca tcggatgtac ttcccacata
      661 cgttgaaaat atttctgtcg ggtcaataat gagcgtggca gtcttatcgt aatcagcgag
      721 cttaaaatga atgacgttac ctttcagatc gaacgccgct tttattttgc tcttaagatt
      781 tttgatcacc tggtaacatg acggtatcgc ctggtaaacg tcgcctacag aagttttcat
      841 cgtgagattg ccatacttgt ttacctccag cttgtctagc ccgttgaact gcatcgcgat
      901 cttgctgatg tcggcacccg gcttcacgat tatgtcatat ttcaaattgc cattatccga
      961 ataataccgc acgtcgacat tcttataaac atccttatac gtcaccccat tgtacacgcg
     1021 gcaaccggtt gcccacttgc tgctgtctga gccgatgaaa taattggtat gcattgcaag
     1081 aggcttatcc ggaaccacct cggcattcgc cgcagcatcc aaaaaattta tttcgtaaag
     1141 atgtgagtgc agtaaaacgc cttttgcccc ggccggcatt ttctttcttt cagtgctgtc
     1201 gaggtggccg ccgaaaaaat cggcaacatt cctaagctcg tcagggttgt gaagcaaaac
     1261 tttataaccg gatgattgaa ggaataaagc gccgcctttg tagtcagatt taaactttac
     1321 cgatttgtcc cattgacctt tgttctccac aaactgcaga tattgagcat tagcaacgta
     1381 agaaacacct gcaatcaaaa gcgcgagaca ggtaaatatg cttttcaagc aaaaattttt
     1441 ttaagttacg ttaaaaacgt tcgtccgttt gtaattgttg tcaggaaatt ttactccacg
     1501 cagtttttcc tttttgcgat aatagaaatg ctttcaattg tgcgttaacc ggtttggcca
     1561 atatctcatc atccgctaaa actttttcag catgttcttt ggccaaggtc aacagctcct
     1621 tgtcattgac tatacttgcc agcttaaagt ttaacattcc actttgtttt gttccctcaa
     1681 tgtcgcccgg gccacgaagt tcaaggtctt tctcggcgat tttaaatccg tcgatcgtgg
     1741 tgcacattgt ccggagtcgt tctttcgcct caaagctgag tttgggggcg cttagcaaga
     1801 tacaataact tttatcattt ccccttccca ccctgcctct taactggtgt aattgggaaa
     1861 gtccgaattt ttcagcgctt tcgatcacca tcatcgaagc gttgggaata tcaataccaa
     1921 cttcaattac agtagtacca accatgattt gagtgtcgcg gtctttaaac cgttgcatat
     1981 tcgcttcctt ttggtcggcg ggcatccgtc catgcaccat actgatgctg tacaaatgtt
     2041 ccgggaaaaa acttttcacc tgttcgtatc cggccatcag gttttcatag ctgagcttct
     2101 cactttcctc tatcaacggg taaacaaaaa aggcctgcct tccgcgcgcg atctcctcct
     2161 tcacaaaatc catcacggcc gccctctttg tctcgtaacg atgaacggtt gttaccggtt
     2221 gcctgcccgg cggcagctcg tcgatgatac tgtaatcgag gtcaccatat gctgtcatcg
     2281 caagcgttcg cggaattggt gttgcagtca ttaccaaaac gtgtggtgga acaggcgatt
     2341 ttttccaaag ctgcgcccgt tgtgccacac caaaccggtg ctgttcatcg acaatcgcca
     2401 atcccaattt cctgaactga actaccgctt cgataacggc gtgcgttccc acgagtatgc
     2461 ctgcgctccc gtcagtaagt tcggccagaa ttttttttcg ctgcgcagct tttgtactac
     2521 cggtgagtaa acggatctca atgggtaaac ccttaagtag cgatcgtaaa ctttcgaaat
     2581 gctgttgagc gagtatttcg gtcggtgcca tcatgcaact ttgatagcca ttgtctgcgg
     2641 ccaatagcat gatcaacaaa gccacgatcg ttttaccgct gcctacgtcg ccctgcaaca
     2701 gccggttcat ttgatgacct tttgctgtgt cgccacggat ctcttttata acccgttttt
     2761 gcgcattggt caattcaaat ggcaggtgat cggtataaaa agaattaaag agcgatccta
     2821 ctttttcgaa tacgattccg tgacttcgcc ggtgtcgttg gccgcggatc atgccaagtc
     2881 gcacctgcgc catgaatagt tcttcgaact tgagccggta cagggcttcc acataggcat
     2941 cgtgcgatgg cggaaaatga atgccgacga tcgaatcgta acggccttta aggttgagtt
     3001 gagttctgat tggtgaagga atattttcag gcagatctct ttctgaaagc tgcgcgagca
     3061 agaccgcggt aagtttcgaa atttgtcttg cgcttaatcc ctttgctttt aatttttcgg
     3121 ttgttggata aactggctcg agaaaagatt ttccggtttc caaccccggt ttgaaaactt
     3181 caaactcagg atgcgttatt tgtagcttcc cgttaaaaaa acctgacctc ccgtagacca
     3241 gatacgtttc gccttcctgc aaagattttt gtatccactg tacgccctgg aaccaggtga
     3301 gttcaacgac acccgtgccg tcctcaagcc atgcagtcaa acgttttgct ccccgctgtc
     3361 ccactgctgc tatctctgtt atttttccaa tgacctggat gaattcagtc ccttcaccga
     3421 tgctgcctat tttgtcaacg tgcgtgcgat ctatatgccg taatgggtaa tgctgaagca
     3481 ggtcggcgaa tgtaaaaatg ccgagttcct ttttgagaag atctccgcgc aaggggccga
     3541 cacctttgag atattcgatc ggagacgtta atatggatga tattgcgctg atgcaacaaa
     3601 tatctgaatg atatacgttc tactttttgt ttcatacaaa aagtagcaaa aaaatcagat
     3661 atgatgcctg gccggtgggc agaaagacac tgcccgaaat aatgtatgtg acaaacgact
     3721 agttttgaac tcttgcatca aaagtgtttg aaggcttatg tacgacgatt catttttacg
     3781 aaacaaatta ttgcaacgtg aacagcagaa cgcgctccgc actttaaagc tgccggaagg
     3841 gaaggtcgat ttttcctcga acgattacct ggggatcgta aaaaataatt tattgcatga
     3901 taagatcgca gttggtttaa aaaccggctc aactggctcg cggttgcttt ccgggaataa
     3961 tgcgctggtg gaaaaaaccg aaaaacaaat agcgcagttt cacgatgcgg aggcggcact
     4021 catattcaat tcaggttatg acgcaaacgt tgggctactg agttgtatac ctcaaaaaaa
     4081 tgacaccgtt ttttacgacc agctttgtca cgcgtccatc cgcgacggaa tacgcttgtc
     4141 gttcgcgcaa agtttttcct ttccgcataa taatattcac gaattggaaa agaagatgaa
     4201 agccgctacc ggtaacaggt ttgttgtaac cgaatcggtg ttcagtatgg atggagattt
     4261 ttgcccccta gctgcgcttg tctcggtttg caaaaaatat aacgcccacc tcgttattga
     4321 cgaagcacat gcaaccggaa tagtcggcga aaacggagaa gggctcaccc aaaacacggg
     4381 tcttcatcgc gaagttttct gccgcataca cacgtttgga aaagcctgtg gctgtcacgg
     4441 tgctgcggtc gtgggttcta ctcaattaag agactatcta ataaattttg cgaggagctt
     4501 cgtttacacg acagccctgc ctgaacattc cgtcgctgcg atcagtgcaa gctatcatac
     4561 atttccgtct ttaaacaacg aacgaagcaa actaaaaatg cttatcgaac gctttcagca
     4621 ggcaagattg agttttgaaa aattagtttc atcaacaccg atacaggttg ttatcatacc
     4681 tggcaatggt gccgtaaaaa cagtggcaga aaaactgcag cacgaagggc tggacgttag
     4741 acctatcttg tacccgacag ttccggccgg aaaagaacgt ttgcgcatcg tactgcatgc
     4801 gttcaacacg acggccgagc ttgaaaaact tatcgaactt ttatcctgat cgttttgcaa
     4861 caaacactac caaagaaatt gttagaaggt ctcgaaggca ttgaaggatt cgacagaaaa
     4921 aactttgaag cagttcacga atctggagaa caaataacct cgatacgttt taaccctgaa
     4981 aaatttcagc acttagtgcc aggtaaaaat tattatcatc catctttcaa gcttggcgag
     5041 caggtaccct ggtgtgaaca tggatcttat ttatctgagc gaccatcctt tacactcgac
     5101 ccgctgttac atgcaggcgc ttactatgtg caggaagcaa gcagtatgtt tttatgggaa
     5161 gtgctcagac gaaccgctgg tgctggttcg aacgtgaaag tcctcgatct gtgtgctgcg
     5221 cccgggggca aaagcagctt gctcgcatcg tggtttatga atggccttgt agtttcaaat
     5281 gaggtgatca agtcgagagt aagtatcctg tatgaaaaca tgacgaaatg gggcgcatca
     5341 aatgttgtcg ttacaaacaa tgaagcggcg gattttcagc gactcaagaa ttatttcgac
     5401 gtgatcgtgg ttgatgcacc gtgcagcggc agcggcctgt ttcgcaaaga tcctgacgcg
     5461 attggcgagt ggagcgagaa catggtcgaa ctgtgcagtc agcgccagca aaaaattgtg
     5521 tcagatattt ttccatcgtt gaaagaagag ggcatactta tttattcaac gtgttcctat
     5581 tcgcccgaag aagatgaaga aatatccgat tggttgaaag accattttcc tgtggacagc
     5641 attcaattga acctggatcc ggaatggaac attgtcgaaa cacgatcatc aaaacaccat
     5701 gcattcggtt accgtttttg gccgcataaa ataaatggcg aaggattttt tattgcagcg
     5761 ttcagaaaaa gtgaagctgc atttgagaat tcaaaacagc ggagagcttc attgcgaaaa
     5821 acaggcgcga gcgaatcatc cttagttgca aattttctct gcacagaggt cgactgcttc
     5881 ttgttttcac aaaacgaaaa tatacatgca ataaaagccg cttgggaagg tgatatagca
     5941 ctgcttcaaa aaacgcttta cctgaagaaa gcaggcatcc gtgttggtca aataaaagga
     6001 aatcaattgg tgccaaatca tgaactggca ttgagcacga tcgtaaacaa aaatgtgcag
     6061 cgaaccgcac tgtcccgcga cgaagctttg cagtaccttc ggaaaaaaga attagatatc
     6121 accggcgttt ccgggggctg ggcattatgc acatgctaca actttccact tgggtgggta
     6181 aaatttttgc acaatcgtgt gaataactat tacccgaccg aatggcgtat tcttaaacat
     6241 taaatttgcc tcattaatta tgagaaggtt tagattcata gtccccgttt taatgtccgt
     6301 cctatgcgtc caaattcttt cagcccagaa taattatttt acccacaaac taaaagaggg
     6361 cgaaactctt tccgcgctcg ccaaacagta caacaccaat gtgggtgata tcatgcggct
     6421 aaatggcatg catgccgaca ctaaactcgt atacgggtct accataagaa tccccgccgc
     6481 ggaagtgcaa acggctaaac aacaaaagag catagttcca caaccgaaac cggaggtaca
     6541 acaaaaacca cagccggttt caacggatgc agtcacacac cgggttgcgc aaggcgaaac
     6601 tttgtacagc atttcaaaac gctacaatgt tcctgcagaa cagatcaaag cgtggaacca
     6661 tctgcctgat aacagcgtta agctggacat ggatttgatc gtaggaacaa aacaatcaaa
     6721 cactgttgtt tcatcatcgc agaaacaatc cccgaaagtg gaggaaaaaa catccgcttt
     6781 ggtagtaacg gaaacacaaa gtaagccgga agttgacgtg agtgaaagca agactgccga
     6841 cgtgagccag ccgaatgtgg aaacttcaaa atcacaaaat acaaacgcag ttaatctccc
     6901 aactgctgac gcagcgtcaa tgaatgaaca tggctatttc gca
//
LOCUS       DASQJI010000358         5667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1114778,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000358 DASQJI010000000
VERSION     DASQJI010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114778"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(332..2443)
                     /gene="ispG"
                     /locus_tag="VEV83_09975"
     CDS             complement(332..2443)
                     /gene="ispG"
                     /locus_tag="VEV83_09975"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate
                     synthase"
                     /protein_id="HYK45487.1"
                     /translation="MQVYCNSLTEYSRLRTLEVKVGDLLLGNLHPVRVQTMTTTDTMD
                     TKATVEQSIRCIEAGAELVRITAPSKKEAENLLNIKNELRKRGYTTPLVADIHYTPNA
                     AEIAARIVEKVRVNPGNYVDKKKFEQIEYTDLEYAEEIERIRERFTPLIKICQEYGTA
                     MRIGTNHGSLSDRIMSRYGDTPMGMVESAMEFLRIARNESYHNIVLSMKASNPLVMVE
                     AYRLLVNKMFEEFHECYPLHLGVTEAGDGEDGRIKSAAGIGTLMEDGLGDTIRVSLTE
                     DPEFEIPVCKDLVSRYEHRDHHSPIKGLLHTISNKLHVGHVKRQASNAKRQASNFKQE
                     TIHLPYNPFSYQRRHTHEVHNIGGLLVPVVIADFMQKEEIYVEDLNAIGYAYDGKTDK
                     WNISDSAADYIYTGNKLVDFNLPGTLKVICNGKTWIDRTLTPALSTDGEGVRNVFPLF
                     EGVEYLEVIHKSPVQNFIAMDVHTIDKEVREKIFDLIATDITAVLCLYSTNKHSMADV
                     RRNMIELMEHNIKTPVIICVESHCAEADEQLIQFSAEAGALLLDGFGDGLWLMNDPKK
                     IHHTNLSGRTYLHNESNHQFLNTTSFSILQATRTRISKTEYISCPSCGRTLFDLQETT
                     AKIRAVTNHLKGVKIAIMGCIVNGPGEMADADFGYVGSGPGKITLYKGKDIIKRNVDS
                     AVAVDELVNLIKDYGAWVEPG"
     gene            2553..3020
                     /locus_tag="VEV83_09980"
     CDS             2553..3020
                     /locus_tag="VEV83_09980"
                     /inference="COORDINATES: protein motif:HMM:NF013331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HYK45488.1"
                     /translation="MKKDIEKRSDIEQLVDHFYEKVKRDPTIGYIFNDIAKVDWQHHL
                     PIMYAFWESIIFNKNSYSGNPMAIHAKLNRQTPLTAAHFKQWLHLFTTTVDELFQGRK
                     AQLAKERAASIAAVIEAKVSNDNAVTQAGIVPDLNGKRKEHLQDPRGKSEGSE"
     gene            complement(3101..4222)
                     /locus_tag="VEV83_09985"
     CDS             complement(3101..4222)
                     /locus_tag="VEV83_09985"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45489.1"
                     /translation="MKKILLLTVLLITCYNLFAFTTQGVWRWRNDDGTETSATWRAEQ
                     NVAITVGSMDSILRLRVELYNQDGGFLDGALFEDSSDEVGGHWDTIKLAANSNAFVLA
                     GSDAYVTDLEPTTSQLSGQALNFIAGRVMVSSDRIPNNTTVPQGYRTEYEYAFKPSPN
                     IKPGVTYYFRIDYSDTTDGYIYPNLSTSSTLPVHLTDFKVSADKGRVLLQWTTTSETN
                     NDHFDIERSTNGTAFTKIATVKGSGNSTDLHTYQAWDASPFNGMNFYRIKQVDADGKY
                     SISDTRSVTMVLKNYFLQVYPNPVRSEINFVLQNYPGSQVTATLTNLNGKIIHEEMIQ
                     VSQSANTYKLNLRQKPAAGVYILQLRGEGLSENVKIVVQ"
     gene            complement(4344..5573)
                     /locus_tag="VEV83_09990"
     CDS             complement(4344..5573)
                     /locus_tag="VEV83_09990"
                     /inference="COORDINATES: protein motif:HMM:NF025182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4185 domain-containing protein"
                     /protein_id="HYK45490.1"
                     /translation="MKRTFIYFVIAFCCVLMNERCSNTKPVAATTTISHARSYEKDSA
                     NQIKTTAAPQWDEMMRHTTGWIGADGVYSMATNGVEAPGMSAQTNTFFWFSDCIIGNI
                     VSDTLRSDWTMLNNSVGYLDGNVPDPNKIHYYWRTDTAGKPISMFEPRTPKTLPGDYY
                     WLGDGVLDHAMDSTIYLFAYRIKNIPGGIYPFDDVGLGLIAIPKHSKPPYDDQYQFDV
                     PFFLKDSKGKGKVVFGICVLPNTVGARAPHPDGYIYVYGVRGPKKELLVARVKDSLFE
                     KFEQWRFWDGSGWNEDINSAAALTDRISNEMSVTFMDDGRVIATYELDTNSPDVVIQA
                     AENPWGPFQPFKKVWETPEIYDAIDFYTYNAKAHPHLSRPGELLISYNVNSFNFLDNI
                     VKHPYHLRPRFVVVKYK"
BASE COUNT         1487 a         1334 c         1231 g         1615 t
ORIGIN      
        1 ggactgacga cagtttgcgc acatgaggtt atgccggtaa gtgttaagct aaaaaatacg
       61 caggcggcag cagtggtttt cgaaagcatt ttgggagttt atgcttccaa aataggaaat
      121 atggtcgaga tatgttaaaa attttttgat ttgttccggc cagttggatc caggaattga
      181 cgtcataaac tcaaatgagc gctgacttga atcccccatc taatatactt ttaaacagag
      241 aaccgaagta aaactgcata tctccattgc agttggcttc agccaactga tcagatgaaa
      301 ctgctgtaga tggctttagc gcacattgta tctaccccgg ctctacccac gcgccataat
      361 ctttgatcag attcaccagc tcatccactg caaccgcact atccacattt cgcttgatga
      421 tgtctttccc tttatacaat gtgatcttgc ccggtccact gcccacataa ccaaaatccg
      481 catccgccat ctcgccgggg ccatttacaa tgcagcccat gatcgcgatc ttgacgcctt
      541 tgagatgatt cgtaacggcg cgaatttttg cggttgtttc ctgtagatcg aaaagcgttc
      601 gtccacaact ggggcaagaa atatactccg tttttgaaat gcgcgttctt gtggcctgga
      661 gaattgaaaa tgatgtcgtg tttagaaact ggtgattact ttcattgtgc aggtaagttc
      721 gcccgcttaa attggtgtgg tgaatttttt taggatcgtt catcaaccat agtccatccc
      781 caaaaccatc gagcaacaag gcgcccgctt cggccgaaaa ttgaatgagc tgttcatctg
      841 cttccgcaca atgactttca acgcaaataa ttaccggtgt tttgatattg tgctccatca
      901 attcaatcat gttccggcga acatccgcca tgctgtgttt attggttgaa tacaaacaga
      961 gcaccgctgt aatatcagtc gcaatcagat caaatatttt ttcccgaacc tctttgtcga
     1021 tcgtatgcac atccatcgct atgaaatttt gaaccggcga tttgtgaatc acttcgagat
     1081 actccacacc ttcaaacagt ggaaaaacgt ttctaactcc ctctccatct gtggagaggg
     1141 ctggggtgag ggtgcggtcg atccacgtct taccgttgca aataactttc agtgttccag
     1201 gcaagttgaa atctaccagc ttatttcccg tatagatata atctgcagca gaatcagaaa
     1261 tattccactt atctgttttc ccatcgtatg cataaccaat cgcgttaaga tcttccacat
     1321 agatctcttc cttttgcatg aagtcggcaa ttacaacggg aactaataat ccgccgatgt
     1381 tatgtacctc gtgtgtatgc cttcgttgat atgaaaatgg attgtacggc agatggatgg
     1441 tttcttgttt gaagtttgac gcttgacgtt tggcgtttga cgcttgacgt ttcacatgtc
     1501 caacatgcag cttgttcgag atcgtatgca gcaacccttt tattggcgag tgatggtctc
     1561 gatgctcata acgcgacacg agatctttgc aaacagggat ctcaaattcc gggtcttcgg
     1621 ttaatgaaac gcgtatcgta tcacctaacc cgtcttccat caaagtgccg ataccagccg
     1681 cgctttttat tctcccgtct tcaccatcgc ctgcttcggt aacgccgagg tgtaaaggat
     1741 aacattcatg aaattcttca aacattttgt tgacgagcag tcgatatgct tcaaccataa
     1801 ccaacgggtt gcttgccttc atgctaagaa caatattgtg ataactctca tttcttgcaa
     1861 tacgcaaaaa ttccatcgca ctctccacca ttcccatcgg tgtgtcgcca taacggctca
     1921 tgatgcggtc gctcaacgag ccatgattcg tgccgatacg catcgccgtt ccgtattcct
     1981 ggcaaatctt aatgagcggc gtaaagcgtt cgcggatgcg ttcgatctct tcagcatatt
     2041 ctaaatccgt gtattcgatc tgctcgaact ttttcttgtc aacgtaatta cccggattca
     2101 cacgcacttt ctccacgata cgtgcggcga tctccgccgc attcggggtg tagtgaatat
     2161 cggcgaccag cggcgtcgta taaccgcgtt tacgcagctc gttttttatg ttgagcaagt
     2221 tctcagcctc tttctttgaa ggagcggtga tgcggactag ttcagcaccc gcctcgatgc
     2281 agcggataga ctgttcaacc gtcgcctttg tgtccattgt atcggtggtc gtcatcgtct
     2341 gaacacgtac cggatgaaga ttgccaagca gcagatcgcc tacttttact tcgagggttc
     2401 ttaatcgact gtattcggtt agcgagttgc aataaacctg catcgaaatt ccttttctgc
     2461 aaagtaacga acaaaaaagc aggcatcgtt actttgcaaa accggcggcc gctaggtgaa
     2521 tcggcaggcc gatttattgt aacactttta agatgaagaa agacatagaa aagcgaagcg
     2581 acatcgaaca gttagtagat catttttatg aaaaagtaaa aagggacccg accatcggct
     2641 atattttcaa tgatatcgca aaagtagact ggcaacatca cctgccgatc atgtatgcgt
     2701 tttgggaaag catcatcttc aataaaaatt catattcagg taacccaatg gcgatacacg
     2761 caaaattgaa tagacaaacg cctttgaccg ccgcgcattt taagcaatgg ctgcatttgt
     2821 ttacgacgac agttgacgag ttatttcaag gcaggaaggc acagctcgcc aaagaacgcg
     2881 cagcaagtat cgcggcggtt attgaggcaa aggtgtcaaa tgacaacgct gttacgcaag
     2941 ccggaattgt gccggatctg aacggaaaaa gaaaggagca tttacaagat ccccgaggca
     3001 aatccgaagg aagtgaataa aagttctttg aagaattccc gataacaaaa atgaaacagg
     3061 ctgcctcgat cgggcagcct gtaaccatat gtctaattat ttattggaca acaattttta
     3121 cattttctga gagcccttct cctctcaatt gcaaaatata aacgcccgca gccggttttt
     3181 gcctcaaatt caatttgtaa gtatttgccg actggctaac ctgtatcatc tcttcgtgta
     3241 ttatttttcc gttaagattg gtaagtgttg cggtgacctg gctaccagga taattctgca
     3301 gtacaaagtt tatttccgaa cgaaccgggt ttggatatac ctgcaaaaaa taatttttca
     3361 gcaccatcgt aactgacctg gtatcagaga tagagtattt cccgtctgca tcaacctgct
     3421 ttatgcggta aaaattcata ccgttgaaag gactggcgtc ccaagcctgg taagtatgca
     3481 agtctgtcga gttaccgctg ccttttacgg tcgcgatctt tgtaaacgcc gtaccgtttg
     3541 tacttcgctc tatatcgaaa tggtcattgt tagtttcgct tgtggtcgtc cattgcagaa
     3601 gcacgcggcc tttgtcagcg ctcactttga agtcagtcag gtgcacagga agggttgacg
     3661 atgtggaaag gttcggataa atatatccgt cggtagtgtc tgaatagtca atccggaagt
     3721 aataggtgac acccggcttt atgttaggag acggtttaaa ggcatactca tactccgtcc
     3781 tgtaaccctg cggtacggtc gtgttattcg gaattctgtc agaggagacc atcaccctgc
     3841 ccgcgataaa gttaagagcc tggccgctca attgcgatgt ggttggctcc aggtctgtaa
     3901 catatgcatc acttcccgcg agcacaaatg cgtttgaatt ggctgctaat ttaatcgtgt
     3961 cccagtggcc accaacctca tcgctcgaat cttcaaacaa tgctccatcc aggaaaccac
     4021 catcctggtt atataattcc acgcgaagac gtaggatgct atccatcgat ccgacagtta
     4081 tcgccacatt ctgctcggct ctccacgtag cagacgtttc ggttccatcg tcattgcgcc
     4141 aacgccacac accttgtgta gtaaatgcaa acaaattgta gcaagtgatt agaagtacag
     4201 taagaagtaa aatttttttc atgatttctt gaattggagt tagaagatgc tatgttgtaa
     4261 aaattattcg ttttttatgg tcataaattt agtgctatct gcttacaatt ctttaatttt
     4321 ttaatcatta tttcagccag aacttattta tatttcacaa cgacaaaccg cggccttaaa
     4381 tgatatggat gtttgacgat gttgtctaaa aaattaaacg aattcacatt atagctgatc
     4441 agcagttcgc ccggcctcga aagatgcgga tgtgcttttg cattgtaggt gtagaaatcg
     4501 atcgcgtcat agatctccgg cgtttcccaa accttcttaa agggctgaaa aggtccccat
     4561 ggattttctg cagcttgtat caccacatcg ggtgaattcg tatcaagttc atacgtggcg
     4621 atgacgcggc cgtcatccat aaatgttacg ctcatttcgt tggagatgcg atcggttaat
     4681 gcagccgctg aattaatgtc ttcattccag ccactgccat cccaaaatct ccactgctca
     4741 aatttttcga acagcgaatc ttttactctc gccaccagca attctttctt tggaccacga
     4801 acaccataca cataaatata tccgtccgga tgcggcgcac gtgctccgac ggtgttgggc
     4861 aatacgcaga tcccgaacac aacttttcct tttcccttgc tgtcctttaa aaaaaatgga
     4921 acatcgaatt ggtattgatc atcgtaaggc ggcttgctgt gctttggaat tgcgataagg
     4981 ccaagtccaa cgtcatcgaa aggataaatg ccacccggaa tattttttat gcgataggcg
     5041 aacaggtaga tagtgctgtc cattgcgtga tcgagcacgc catcgccaag ccagtaataa
     5101 tcccccggga gagttttcgg agtgcgcggc tcgaacatgg atattggctt cccggcggtg
     5161 tctgttctcc agtagtaatg gatcttgttc ggatccggaa catttccgtc caaatagccg
     5221 acagaattgt tgagcatcgt ccaatccgac cgtaaagtat ctgaaacaat atttccaatg
     5281 atgcagtcgc taaaccagaa gaaggtattt gtctgagccg acataccggg agcctctacg
     5341 ccattagttg ccatactata gacgccatcc gcgccaatcc accctgttgt gtggcgcatc
     5401 atttcatccc actggggcgc agcggttgtt ttgatttggt tggcagagtc cttttcatat
     5461 gatcgcgcat gcgaaattgt tgtagttgcc gcaactggct tcgtattgct gcaacgctca
     5521 ttcatcaaca cacaacaaaa agctatcaca aaataaatga acgttctttt cattgttgtg
     5581 cagttgtttt tggtgagccg atactgtccc acttgtctgt gcgaaatggc attgccggca
     5641 gaccggcctt gttacataaa ttggtca
//
LOCUS       DASQJI010000359         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_194693,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000359 DASQJI010000000
VERSION     DASQJI010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194693"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VEV83_09995"
     CDS             <1..649
                     /locus_tag="VEV83_09995"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HYK45491.1"
                     /translation="YANITKFVHMMFSHNLGEVLMIFTAIVLGWPLPLLPLQILWMNL
                     VTDVFPALALALEPPSPAVMKQRPRDPSASLLSKNLLILVGWQAMMIASLALAAYVWA
                     LRMYGPGAHARTVALFAIIGAQVGHMFNCRSRTRSALAGLFRNPFIWAATLIVILLQF
                     LAIYFSPLAIVLGTTRLAEIDWMVIGFCVVVPVIVVEISKATAKRTVSSVDAKSI"
     gene            complement(1157..1900)
                     /locus_tag="VEV83_10000"
     CDS             complement(1157..1900)
                     /locus_tag="VEV83_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45492.1"
                     /translation="MRTMREFEKHVATINRLMRCLFLSAVLLVFVSGFLNDMTTATTG
                     YVSHSDSYIQGSSPRQSLQLAANVVSQQYCSKTRPDSSSESQLALQLKLSVRNTSEVA
                     LIVPRFNNAVYRVVLSKSLEKTKSGNYAYDAHSTLMRIRWPENEDWKQLSPTSEFVIL
                     KPNESFDYQYLQGIEISLTDPDDGRHRLPAGRYFLQVKIQTWPWDAEKINVLQQRWAQ
                     YGHLWYHDIASEPLLVSIEKPASISTVCK"
     gene            complement(1857..>2339)
                     /locus_tag="VEV83_10005"
     CDS             complement(1857..>2339)
                     /locus_tag="VEV83_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45493.1"
                     /translation="GTTPDQLKVIVAAIDDLVNRIKTNKDCADLLGGQEKALKALRDS
                     TISVEPLKAEVIIPTSGSRAGQMIFGRVIVGETAGKTIKLGSNTIFAPDGRISAINIA
                     TGQPVEVLTKPADINEVGETLAHETAHRTKSKGIIQDDNNQTNNDENNARVRKACGYN
                     "
BASE COUNT          547 a          558 c          588 g          646 t
ORIGIN      
        1 ttatgccaac atcaccaagt ttgtgcacat gatgttttcg cacaacctcg gtgaagtgct
       61 gatgatcttt actgccattg ttttaggttg gcccttgccg cttctgccgc tacagattct
      121 ctggatgaat ctggtcaccg acgtctttcc cgcgctcgcc ctcgcgctcg aaccgccttc
      181 gccggcggtt atgaagcagc gaccccgaga tccatcggcg tcgttgttgt caaagaacct
      241 gcttatcctg gtcggttggc aagccatgat gattgcatcg cttgcccttg ccgcttacgt
      301 gtgggccctg cgaatgtatg gcccgggagc gcatgcaaga acggttgcgc tattcgcgat
      361 tattggtgct caggttggac acatgttcaa ttgccgttcg cgcacacgtt ccgcgctggc
      421 tggactcttc agaaatccat ttatctgggc cgctactctc atcgtgatat tgctccagtt
      481 tctggcgatc tatttttcac ctttggcgat cgtacttggt acgactcgcc ttgctgaaat
      541 cgactggatg gtcatcgggt tctgtgttgt ggtgcccgtg atcgtcgtgg agatttcaaa
      601 agcgacagct aaacgaaccg tgtcatcggt ggacgcaaaa agtatttgaa aaggattgcg
      661 gtgttacgag tggcggtgat gccgcgggat gaatgcggca gtcagagcgg ttgtccggac
      721 gtgtgtcgat aacggacggg aactctacgg atccgctggg gatatgctgc acttatagcg
      781 gtaacattga aattcaatta ccggaacttt acgacaactg gcattgtcac ttatggcgag
      841 cgcaaaagaa caatagcgcg gggtctagga gatgaggaaa ttacctgtga aaccaggtga
      901 tatgtttggt tgctttcacg gctgaaacgg gccttgagtc aaggtggaga cttgcaagcg
      961 tcgtgcggac cgtttattcg gtgcgaagcg cgttcagcgg gtcgatggaa gttgcccgga
     1021 gaggtgtcca gacggtcact agttggacaa caaaatcaaa gtaatcagcc acatcaatac
     1081 ttcagatgcg ctaaatacgt tccaatgaaa gccagactaa tcccctaagt agtcgatcaa
     1141 aaacttgtgg ccgtgtctat ttgcaaacgg tggagattga agctggtttt tcgatcgaaa
     1201 caagcaacgg ctcagaggca atatcgtgat accacaaatg tccgtattga gcccagcgct
     1261 gctggagcac gttaatcttt tccgcatccc atggccatgt ttggatcttc acctgcaaga
     1321 aatatctacc agcaggtaag cgatggcgcc catcgtctgg gtcagtcagg gaaatttcaa
     1381 tgccctggag atattgataa tcaaaagact cattgggctt aagaatgaca aactcacttg
     1441 ttggcgagag ttgtttccag tcctcgtttt ccggccatcg gatccgcatt agagtagaat
     1501 gcgcatcgta ggcgtagttg cctgactttg ttttctccaa gcttttactt aggacgactc
     1561 tgtagacggc attattgaat ctgggaacaa ttaatgctac ttcgctggta tttctcaccg
     1621 acagtttcaa ttgcagcgcc agctgggatt ctgaagaaga atcaggccgc gttttactgc
     1681 aatactgttg actgactaca tttgccgcca actgcaagga ttgtcgagga gacgatccct
     1741 ggatataaga gtccgaatgc gacacataac ctgtagtagc agtggtcata tcgttcagaa
     1801 aaccactaac aaaaaccaac aagactgctg ataaaaatag gcatctcatc agtctattaa
     1861 ttgtagccac atgcttttcg aactcgcgca ttgttctcat cgttgtttgt ttgattgtta
     1921 tcatcctgga ttataccctt cgatttagtc ctgtgagctg tttcgtgtgc gagcgtctca
     1981 ccaacttcat tgatgtcggc gggttttgtg agaacttcaa ccggctgtcc cgtagcaata
     2041 ttgatggctg agattcttcc gtctggcgca aagatagtat ttgagccaag cttgatagtc
     2101 ttccctgcag tttcacccac aatgactctg ccgaagatca tttggccggc acgagagcca
     2161 cttgtgggta taattacttc ggccttaagc ggctctacac taatagttga gtctctcaag
     2221 gccttcagtg ccttctcttg tccacccaat aaatctgcac agtccttgtt tgtttttatg
     2281 cggttcacta gatcatcaat tgccgcaacg atcactttaa gctgatccgg ggtggtacc
//
LOCUS       DASQJI010000360         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2038230,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000360 DASQJI010000000
VERSION     DASQJI010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2038230"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VEV83_10010"
     CDS             complement(<1..269)
                     /locus_tag="VEV83_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HYK45494.1"
                     /translation="MFGHLGEDAIEDVLHQQFIGRIGCNYNDVTYVVPIGYAYDGKYV
                     YAHAEEGMKINMMRENPHVCFEVDTIENMGNWKSVIGWGDYEELT"
     gene            complement(386..1153)
                     /locus_tag="VEV83_10015"
     CDS             complement(386..1153)
                     /locus_tag="VEV83_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYK45495.1"
                     /translation="MKKIIKYVIADILRNKIVLAYTACLLIISLSVFMLEDTSSKGLL
                     SLLNITLIIVPLVSLIFSAIYMYNSSEFIELLVSQPLKRKTIWLSLFYGLSAALSLSF
                     FIGVGIPILIYEPTTTGFFMIGAGIVLSIIFVAIALYTSAVVRDKAKGIGVSILLWLY
                     FSLLFDGLVLFLLFQFEDYPLGNFMVAVSAFNPIDICRIFILLHMDISALMGYTGAVF
                     KDFFGSQGGSMIAAVVLCCWIAVPAWLGVRRFRRKDL"
     gene            complement(1150..1863)
                     /locus_tag="VEV83_10020"
     CDS             complement(1150..1863)
                     /locus_tag="VEV83_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45496.1"
                     /translation="MIIASNLTKRFGKLTALDDVSITCNRGECIALIGPNGSGKTTLI
                     KCILGMVVPDNGFITFNGTNILHDWQYRKDLGYMPQIGRYPENMTVGQVINMIKDLRK
                     PYTKIFDEELIESFELSKILKKRMRTLSGGTRQKVSACLALLFNSDVLILDEPTAGLD
                     PLSAQIFKEKLMAEKKNGKLVLITSHILSDLDDLVTHVVYMQEGRLLFQKDIETLRFE
                     TGEQRLAKAIASVMQNAAT"
     gene            complement(1860..>2208)
                     /locus_tag="VEV83_10025"
     CDS             complement(1860..>2208)
                     /locus_tag="VEV83_10025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HYK45497.1"
                     /translation="WAIRIEASCSDDVITHNNFYGNTFDVSTNGTLVLNSFDHNYWDK
                     YEGYDLNKDRLGDVPYRPVSLYSMIAEENPSAMMLFRSFMVALFDKTEKVLPGIIPEN
                     LKDNAPFMKPLPL"
BASE COUNT          615 a          511 c          459 g          623 t
ORIGIN      
        1 tcggtcagtt cttcataatc gccccagcct attacgcttt tccagttgcc catattttca
       61 atcgtgtcaa cctcgaagca cacatgcggg ttctcccgca tcatatttat tttcatgcct
      121 tcttccgcat gagcgtaaac gtacttgccg tcgtaggcat aacctatcgg tactacataa
      181 gtaacatcgt tgtaattgca accaatgcgc ccgataaatt gttgatgcag cacatcttcg
      241 atcgcatctt cacctaagtg tccaaacatg cccgtgagtt tatattgtaa aaatattttt
      301 cagttcagaa aattcattga cagcagtcaa tagttgcaat gatagttgtc agttttaaga
      361 gtacgtaaat cggaggcgtc tgcgtctaaa gatctttcct cctgaatcgt cttacaccga
      421 gccacgcagg cacggcgatc cagcagcaca aaacgactgc agcgatcatt gaccctccct
      481 gtgagccaaa gaaatctttg aaaacagcac cggtgtatcc catgagtgca gaaatatcca
      541 tatgcaagag gataaatatc ctgcatatgt caatcgggtt gaatgcgctg acggcaacca
      601 taaaatttcc cagcggataa tcttcaaact ggaaaaggag aaataaaaca agtccatcga
      661 acaacaaaga gaaatacagc cagagcagga tggaaacacc gatgcctttt gccttatctc
      721 gtactactgc ggatgtatat aatgcgattg cgacaaaaat tatggagagt acaatgcccg
      781 ctcctatcat aaaaaatcct gtggtggtgg gctcatagat cagtatcgga atgccgacgc
      841 cgataaagaa tgacaagcta agcgccgcgc tcaaaccata aaataaactg agccagatcg
      901 tcttcctttt tagtggttgg cttacgagca gctcgataaa ttcagagctg ttatacatat
      961 agatggctga aaagatcagc gagacgagtg gcacgattat gagcgtaatg ttcagcaaac
     1021 tcagcaagcc tttcgacgag gtgtcttcaa gcatgaacac actcagcgaa atgataagca
     1081 ggcaagcggt gtaagcaagt acaatcttgt tacgcagaat atcagcgatt acatatttga
     1141 ttattttctt catgtggccg cgttttgcat tacacttgcg attgcttttg ccagtctttg
     1201 ttctccggtt tcgaaacgca gtgtttcaat atctttctga aacaacaacc ggccttcctg
     1261 catgtaaaca acgtgcgtta ccaaatcatc gaggtcgctt agaatatgag aggtgatgag
     1321 caccagtttc ccgtttttct tttccgccat caatttctct ttaaaaattt gagccgataa
     1381 tggatccaat cccgcggttg gctcgtcaag gatcaatacg tcggagttga agagtaatgc
     1441 caggcaagca cttacctttt gtctcgtgcc accactcaag gtgcgcattc ttttttttaa
     1501 gatcttgctc aattcaaaac tttcgataag ctcctcatca aaaatttttg tataaggctt
     1561 tcgcaggtct tttatcatgt tgatcacctg gcccacggtc atgttttcag gataccgccc
     1621 gatttgtggc atatagccga gatctttccg gtattgccag tcgtgaagaa tgtttgtccc
     1681 gttgaaagta atgaacccgt tatcgggcac aaccatgccg aggatgcatt ttatcaaagt
     1741 ggttttgccg ctgccattgg ggccaatcaa tgcgatgcat tctccccggt tgcatgtgat
     1801 ggagacatcg tccaaagccg ttagctttcc aaaacgtttt gtaagattgc ttgcaatgat
     1861 cataaaggca agggtttcat gaaaggtgcg ttatctttta aattttcagg tatgatgccg
     1921 ggcaacactt tttcggtctt atcaaacaac gcaaccataa agcttctgaa taacatcatc
     1981 gcagacggat tttcctccgc gatcatcgaa tacaaactca ctggcctgta tggcacatcg
     2041 cccagcctgt ctttattgag gtcgtatccc tcatacttat cccagtagtt gtggtcgaaa
     2101 ctgttcagaa cgagtgttcc attggttgat acatcgaatg tgttgccgta aaaattatta
     2161 tgcgttataa catcgtctga gcaactcgct tcaatgcgaa tcgcccaa
//
LOCUS       DASQJI010000361        17594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1729870,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000361 DASQJI010000000
VERSION     DASQJI010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17594
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729870"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VEV83_10030"
     CDS             complement(<1..251)
                     /locus_tag="VEV83_10030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45498.1"
                     /translation="MRLRLALFHSYFSYIANNWDISNMDRKVYLGILCSIISIAAFSQ
                     KTEQQDKERRQQERKQHIADLIKREEEGALIFDKQFALG"
     gene            321..725
                     /locus_tag="VEV83_10035"
     CDS             321..725
                     /locus_tag="VEV83_10035"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYK45499.1"
                     /translation="MTSEIVYKGELRTEAKHLQSATIIQTDAPTDNQGKGERFSPTDL
                     LATSLGSCMLTIMGIKARDMEVNLDGTQVSIKKIMKQDPRRVGGIEVDFDFPGTLQVD
                     EKQRAILERAALTCPVAKSIHPDIELDVHFGW"
     gene            complement(710..1993)
                     /locus_tag="VEV83_10040"
     CDS             complement(710..1993)
                     /locus_tag="VEV83_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2851 family protein"
                     /protein_id="HYK45500.1"
                     /translation="MNERLLQFIWQFQYFNQTSLATDDEKPLQIIHPGTLNRNQGPDF
                     HEGRIKLDDKVWIGNIELHVHASEWHQHHHSSDKNYDNIILHVVWHNDAEIRYPNGEL
                     IPVLELHSLVPKVLLQRFDDLMFTNDDISCANSLPVLNEVSWTAWKERLLVERLQERS
                     ETIATWLEQENEHWEEVFWRCLARAFGMKVNADVFEQIAQSLPVNLLARHKHQIHQLE
                     ALLLGQGNLLSSSFDDDYPVMLQKEYKFLAKKYGLKPINKLPDFLRMRPHNFPTIRLA
                     QLAMLVHQSSHLFSKIKTAEHPNEVFQWFDISANDFWRYHYTLFEETAYHSGSPGRTF
                     IQHVVINAIIPMFFSYGHIRGEQSWKDKAITWFLQSASEENVITKNWKAHGIENKTAF
                     DSQALIQLKKNYCDRKRCLECAVGAKLLRATHQPK"
     gene            complement(2017..2583)
                     /locus_tag="VEV83_10045"
     CDS             complement(2017..2583)
                     /locus_tag="VEV83_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HYK45501.1"
                     /translation="MPKIILASKSPRRKQLLEWAEIPVDIVASDVDEIFPADLPIAEV
                     PVFIARRKANAVREGLPHNEQIILAADTIVVLENEVIGKPVDRADAIEILKALSGKTH
                     QVITGVVLLHEGNEIAFADTTEVIFHELTEEQITFYVDHYQPYDKAGAYAIQEWIGVV
                     GIQSINGDFYNVMGLPVSRVIRELNKLM"
     gene            complement(2586..3440)
                     /locus_tag="VEV83_10050"
     CDS             complement(2586..3440)
                     /locus_tag="VEV83_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranylglycerol-phosphate
                     geranylgeranyltransferase"
                     /protein_id="HYK45502.1"
                     /translation="MYCVLQPLISEGGKKPFLNPAHFSLLVISSVLIAAAGYIINDYF
                     DLNIDRINKPERLIVQNIIKRRWTIVWHFFLSMAGIAIGFYLDFTTRVTFLGFSNLIC
                     ACLLFIYSISLKKKLLAGNVLISLLTAWTVLVVTWCEIYFFLNPRDLNTPKIARMTML
                     YAGFAFVSSLIREAVKDIEDIEGDRMYGCRTMPIVLGINVSKIYSAVWLTILIAVVFA
                     LQFYVLQFHWWLSAIYCLLFILVPLAMIFVKLFTAQTSGDFHKLSTMVKFVMLTGILS
                     MIFFRFYF"
     gene            complement(3574..4089)
                     /locus_tag="VEV83_10055"
     CDS             complement(3574..4089)
                     /locus_tag="VEV83_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HYK45503.1"
                     /translation="MLKSFNSIKTFVFDIDGVLTDGTVFLTESGAMLRRMHVKDGYAL
                     QLAVKKGYTIIVISGGSSPESKLRLEKLGVRHIYMQVEDKLKKLQELIGSLQLQRESI
                     LYMGDDIPDLDVMQYCGLACCPTNAVAEIKRVSKYISPFEGGSGCVRDVIEKVLKLQQ
                     QWTPDTHIPSK"
     gene            complement(4150..4224)
                     /locus_tag="VEV83_10060"
     tRNA            complement(4150..4224)
                     /locus_tag="VEV83_10060"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4187..4189),aa:Val,seq:tac)
     gene            4509..4790
                     /locus_tag="VEV83_10065"
     CDS             4509..4790
                     /locus_tag="VEV83_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45504.1"
                     /translation="MKYTQPYLDKLQNILHESEYTLRYERGTFQSGWCVLEQKKVVVV
                     NKFLDVEGRINTLLELIPQLKIDYDKLTLESQKLFELVKPGEQQFTFPS"
     gene            4822..5598
                     /locus_tag="VEV83_10070"
     CDS             4822..5598
                     /locus_tag="VEV83_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK45505.1"
                     /translation="MSAPNIQVKFLGTGTSTGIPMIGCRCKVCTSTNPKDKRLRASIL
                     LESPFTTIVVDTTPDFRYQMLRIQNEKLDAVLFTHPHKDHIAGLDDVRAYNFFQHKPM
                     DVYANALTAEALKREFAYVFADKKYPGIPEINLYTIDETFLMIGDIPIQPFTVWHHKM
                     PVYGFRFKNFTYITDANKIDEPVKEVIKGSEIIVLNALRNEHHVAHFSLTEAVSLVHE
                     LKVPKAYFTHISHQLGKHESVETQLPSDIHLAYDGLTLDI"
     gene            5624..6343
                     /locus_tag="VEV83_10075"
     CDS             5624..6343
                     /locus_tag="VEV83_10075"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HYK45506.1"
                     /translation="MIKSIWKDYFTFSKKERNAVFILLTILAVTIVVPYFIPEKKLRI
                     TIDQDLQQQLDQYLAKRSNVAIRDSVVDSVATRERSFSLFEFDPNTLSKEGFKKLGLN
                     DKVIQTIFNYRSKGGYFKVPDDIRKVYGLSATDAERLLPYIRIASISSKERNYSQEKH
                     DNEHNYPQRSEKKIEINTATADEWKSLPGIGEVLGNRIVKFRNAIGGFKSVDQVRKTY
                     GLSDSTFKAIMPYLVLTDSLK"
     gene            6423..7556
                     /locus_tag="VEV83_10080"
     CDS             6423..7556
                     /locus_tag="VEV83_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYK45507.1"
                     /translation="MNEVTQQIAHSARDFAARHIKPHVMEWDENQVFPLDVFREMGGL
                     GFMGVLVPEEYGGSGLSYFEYKAIIEEVAKVCGGIGLSVAAHNSLCTGHILYFGNEEQ
                     KRRFLPKLATCEWLGAWGLTEPNTGSDAGNMRCTATRKDGQWLINGTKSWITHGKSGD
                     IAVVIARTGEPRTKNNATAFVVEKGTTGFSAGKKENKLGMRASETTEMIFDNCIIPDE
                     NRLGEVGAGFKQAMKVLDGGRISIASLALGIAKGAFEAAARYSKERYQFDQPIANFQG
                     ISFKLADMATEIDAADLLTLRACELKNENKKVSREAAMAKYFASEVAVKTANEAVQIF
                     GGNGYTKEFPVEKYYRDAKLCTIGEGTSEIQKLVIARETLQMF"
     gene            complement(7564..7740)
                     /locus_tag="VEV83_10085"
     CDS             complement(7564..7740)
                     /locus_tag="VEV83_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45508.1"
                     /translation="MQELIEKLKAEAGLTEKQAWQAVNIVKDFAKSKFPMFGGAIDKA
                     FSKYSKKDEEDFLD"
     gene            complement(7758..7831)
                     /locus_tag="VEV83_10090"
     tRNA            complement(7758..7831)
                     /locus_tag="VEV83_10090"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7795..7797),aa:Pro,seq:cgg)
     gene            complement(7847..8860)
                     /gene="gap"
                     /locus_tag="VEV83_10095"
     CDS             complement(7847..8860)
                     /gene="gap"
                     /locus_tag="VEV83_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HYK45509.1"
                     /translation="MSTVKVAINGFGRIGRLVYRQIFDMEDIDVVAVNDLTSPAVLAH
                     LLKYDSAQGRFGKNVQAGENSITVEGHEIKIYAQKDPAQIPWKDHDVDVVLECTGFFT
                     DKAKAEAHITAGAKRVVISAPGKGEMKTIVYNVNHDILDGSETVISCASCTTNCLAPM
                     AKVLEDSYGIVAGLMTTIHAYTNDQNTQDAPHPKGDLRRARAAAQNIVPNTTGAAKAI
                     GLVIPSIKGKLDGTAQRVPTLTGSLTELTTVLGKKVTAEEVNAAMKAAANESYGYTED
                     EIVSSDIIGMHYGSLFDATQTKVLSVGDQQLVKTVSWYDNEMSYVSQLVRTVKYFAGL
                     ISK"
     gene            9028..9099
                     /locus_tag="VEV83_10100"
     tRNA            9028..9099
                     /locus_tag="VEV83_10100"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9061..9063,aa:Glu,seq:ttc)
     gene            9165..9437
                     /locus_tag="VEV83_10105"
     CDS             9165..9437
                     /locus_tag="VEV83_10105"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK45510.1"
                     /translation="MIAVYVIESLRDGTWYTGMARDAEQRLKEHNAGKNRFTKGHIPW
                     KKIFTEHHDTWAEARIREKYLKTNAGKIWLKKFLTASGGKAGSLPA"
     gene            9591..10976
                     /locus_tag="VEV83_10110"
     CDS             9591..10976
                     /locus_tag="VEV83_10110"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HYK45511.1"
                     /translation="MSTPEEIKELQQRLDQLSRELEGYRQQLFTLRQQVNHLNGNATP
                     GQPNAPKQIGTSKRNAGVTSASRQTALENFIGLRVIHVVGIVVLLIGISIGVKYAIDQ
                     NLITPLSRIILAYMASAGLFILSVILRKNYEGFSAILFSGAMASAYFTTYGAFVYYDL
                     FPQTFAFVIMAGLAVYTAIKSIQYNRQEIALLGMVGAYAIPLLVSSNHENYVLLFSYV
                     LVMNAGILYVSFRRSWKVMNLLALFITWTIFTGWLLFKYKPAYKFYAIIFTAAYYISF
                     LLSAFAFRIRKHIRLSQRQLLHLLLNNFAFFISLLSIFEASSSNARAAAITGFCAILF
                     FAFALAGNNFFHDEKMLNRMHYVESLILAVLFVAIEWSGLNITLLWTLISVIVFVLGI
                     ITKTTWPRLASIVLLALTLLKLMIIDSLSFTAVQKIIAYLTIGTLLLVISFFYQKFRQ
                     MLFENAENEKI"
     gene            complement(10973..11938)
                     /locus_tag="VEV83_10115"
     CDS             complement(10973..11938)
                     /locus_tag="VEV83_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HYK45512.1"
                     /translation="MMGAFSNRITKLFNVDYPIVQAGMVWTSGWKLASAVSNAGALGL
                     IGSGSMYPDILKLHIQRCKAATSKSFGVNIPLLYPDIDKHIQIVIDEQIKIVFTSAGN
                     PKTWTPVLKEKGITVVHVVSSSAFAKKAEDAGCDAVVAEGFEAGGHNGREETTSMVLI
                     PAVREAVKIPVLAAGGIATGRQMLAAMIMGAEGVQIGTRFVCSNEASNHPSFKEALVN
                     SKEGDTMLSMKKIVPVRLFKNKFFQSIQEAESRGATKEELAALLGRGRAKRGMLEGDL
                     EEGELEIGEVSALIKDIKPAAEIVNDVWNEFNAALHDPLHAGPVA"
     gene            complement(12006..12998)
                     /locus_tag="VEV83_10120"
     CDS             complement(12006..12998)
                     /locus_tag="VEV83_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HYK45513.1"
                     /translation="MKAIIPVAGAGAKLRPHTYTQPKALIPIAGKTILSFIVDQLRDA
                     GIHEFIFIVGYLGEKIHEYVLQTYPDLTCHFVYQNERQGTGHAVELTKTIVGNDEVLV
                     TLGDTICDYNIKEVMECPCNMLGIKKVDDPRSFGVAELSEEGYIDHVIEKPAIPKSNM
                     ALVGIYKIKDTCILFECLEQLFRQNITSYGEYHLTDALDCMIRRGAKFKSFKVKNWFD
                     CGKKETLLESNTTLLKKFGGTIDENLLSENSIIIPPVSIGNGCRLKNSIVGPHVSVGP
                     NTTLEYSVVRDSIIGSYTNLFEVVLDNSLIGSDASVKGLSRTLNIGDNTELDFG"
     gene            13322..14818
                     /gene="guaB"
                     /locus_tag="VEV83_10125"
     CDS             13322..14818
                     /gene="guaB"
                     /locus_tag="VEV83_10125"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HYK45514.1"
                     /translation="MATIVNAPQKVKHPRFFGEGLTFDDVLLLPAYSQVLPRETEIST
                     KLTKSLRLNIPMLSAAMDTVTEANLAMALAREGGLGILHKNMSIERQAEQVRKVKRSE
                     SGLIIDPITLHADATIADALKLMKENKIGGIPIVDKNNLLVGILTNRDLRFEDDKKKK
                     VSEVMTKENLITAPDGTDLKKAETIFRRYKIEKLPVVNKEGMLTGLITYRDILQLRNY
                     PNAVKDAFGRLLVGAALGITKDINDRASALMHVGVDAVTLDSAHGHSKGVIDALKSLK
                     KNFKKLQVIAGNIGTAAGAKALAAAGADAVKIGIGPGSICTTRIVAGAGVPQLTAIME
                     AAGALRESGTPLIADGGIRYTGDMVKALAAGADTVMMGSIFAGVEESPGETIIYEGRK
                     FKEYRGMGSIAAMAQGSSDRYFQDVEDDIKKLVPEGIEGRVAYKGYLSEVVAQFTGGL
                     RSGMGYCGAKTISDLQKARFVIITNAGMRESHAHDIEITREAPNYSRS"
     gene            complement(14830..15372)
                     /locus_tag="VEV83_10130"
     CDS             complement(14830..15372)
                     /locus_tag="VEV83_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HYK45515.1"
                     /translation="MSTTGKVIWTIGHSTRTLDHFISMLQSFSIETVADIRSFPGSKR
                     YPHFNKEALQTSLPASGIKYIHIQTLGGRRRVDRHSKNTAWKHPAFRGYADYMETDDF
                     KKGIDELEEIASKNRTAYMCSEAVWWRCHRSLVSDYLKINGWIVYHIMEAGKKEEHPY
                     TKPAKIVNGKLSYESNDLLF"
     gene            complement(15430..16506)
                     /locus_tag="VEV83_10135"
     CDS             complement(15430..16506)
                     /locus_tag="VEV83_10135"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK45516.1"
                     /translation="MKSAKSIFTQISTVRRYRFNTIVSIALLWTLIDIVVVLVFNTLP
                     EENSFNTLLLREVIVFASSVGVGFLLVTELRRLFRDFNLLTAFLIKSVILIVAAFLIN
                     LLIYAISSITLLGLPISESFHHFYDDFSDIHNLLQKLLYWLILFVITQLIIELNEKYS
                     PGVFMDILLGKYVHPKIEKRIIMFMDLKDSTPIAEKLGSQQYFRFIREFIYHLSNALI
                     EYGGRIYQYVGDEIVVSWLFNEDNTKKCLKALIQARRNLNKRHEHFRRLYGILPEFRV
                     GIHVGEVTVGEIGVIKKDVAMSGDTMNTAARIRTACSELNQKFIVSKDFVEASDLKDW
                     HTESLGMVELKGKANEIELFALKI"
     gene            complement(16503..>17594)
                     /locus_tag="VEV83_10140"
     CDS             complement(16503..>17594)
                     /locus_tag="VEV83_10140"
                     /inference="COORDINATES: protein motif:HMM:NF024490.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HYK45517.1"
                     /translation="IDSGDVFNVLDRQDILLHIPYHSYNLVLAFFNQAAVDPKVTEMY
                     ITLYRVAAESHIVNALISAAKNGKRVTVFIELKARFDEANNIRWSKTMKQAGINIIYS
                     QPDIKVHSKIGLIKKQSGLQTLSYAILSTGNFNEVTAQFYTDHVLMTTDPTITTELVS
                     LFDFLKKNDVEAKAKMKFEKLLVSQFNMYDRFVKLIDAEKEKAARGEEALIRIKINNL
                     EEPEIITHLYKASQAGVKIYLIVRSVCCLVPGVAGLSDNIIVRRLVDRYLEHTRLFIF
                     GTGNSAEVIMGSADWMNRNLHSRIEVCVSISNPDCKKELIDYFEIQWSDNDKMTELTS
                     SLEQHRIDANGFPRINAQQSIYHYLQESQ"
BASE COUNT         4873 a         3901 c         3869 g         4951 t
ORIGIN      
        1 aagccgagtg caaattgttt gtcgaagatc aacgctcctt cttcttcccg tttgatgagg
       61 tccgctatgt gctgcttacg ctcctgctgc cttcgttctt tgtcctgctg ctccgttttt
      121 tggctaaatg ccgcgataga aattattgag cagagtatac ctagataaac cttcctgtcc
      181 atgttactga tgtcccaatt gttcgcaata tagctgaaat aactgtggaa taacgccaat
      241 cttaaccgca tattgcagta gctgcatgcg ttaccttcga ttatcgttga tagtcgtaaa
      301 tttataacaa aattcgtgga atgacttcag aaatagttta taaaggcgag ttaagaaccg
      361 aggcaaaaca tttacaaagc gctaccataa ttcagactga cgcgcctacc gataaccagg
      421 gaaagggtga aaggttttca cctaccgatt tgctggctac ctcgctggga agttgtatgc
      481 ttaccatcat gggaataaaa gcgagggaca tggaagtgaa ccttgacggc acgcaggtga
      541 gcataaagaa aatcatgaaa caggacccgc gccgtgtggg gggtatcgaa gtggattttg
      601 attttccggg aacattgcag gtcgatgaaa aacaaagggc gatcttagaa cgggccgcgc
      661 tcacctgtcc cgtcgcaaaa agtattcacc cggacataga gttggacgtt cactttggtt
      721 ggtgagttgc ccgcaacaat tttgctccca ctgcacattc aaggcacctt ttccggtcgc
      781 aataattttt cttcaattga attagagcct ggctgtcaaa cgctgtttta ttttcaatgc
      841 cgtgcgcctt ccaatttttt gtgatcacat tttcttctga tgccgattga agaaaccagg
      901 taatcgcttt gtccttccag ctttgctcac cgcgaatgtg tccgtacgaa aagaacatcg
      961 gaatgattgc atttataacg acgtgttgta tgaaagttcg tcccggtgat cctgaatgat
     1021 acgcggtttc ttcgaacaaa gtataatgat accgccagaa atcgtttgca gaaatatcaa
     1081 accactgaaa gacctcgttc gggtgctcag ccgtttttat tttagaaaac aggtgagatg
     1141 attggtgcac gagcatcgcc aattgtgcca accggatcgt tggaaaatta tgcggtcgca
     1201 tccttaaaaa atcgggcagc ttattgatgg gtttcaatcc atattttttt gccaggaatt
     1261 tgtactcttt ctgcagcatc accgggtagt catcatcaaa agatgaactc aataaattcc
     1321 cctggccgag caacaacgct tcaagttgat gtatttggtg tttatgtctc gccaaaagat
     1381 tgaccggcag agattgtgca atctgttcaa aaacatccgc gtttactttc atcccgaacg
     1441 ccctcgcaag gcatcgccaa aacacttctt cccaatgttc attttcctgc tctaaccacg
     1501 tagcaattgt ttccgatctt tcctgcaacc gctcaacaag caatctttcc ttccatgccg
     1561 tccatgacac ctcgtttaaa accggaagac tatttgcgca ggagatatca tcattcgtaa
     1621 acattaaatc gtcgaagcgt tgcaaaagga cctttggaac caatgagtgc agttcgagta
     1681 cagggatcag ttccccattt ggatatcgta tctctgcatc attgtgccat acaacatgta
     1741 atatgatatt gtcataattt ttgtcagatg aatggtgatg ctgatgccat tctgaagcgt
     1801 gaacgtgcag ctcaatattt ccgatccaga ctttgtcatc cagcttgatc cgaccttcat
     1861 ggaaatccgg cccctggtta cgatttaatg tgcccgggtg gattatttgc aaaggctttt
     1921 catcatcagt tgcaagagac gtttggttga aatactggaa ttgccagatg aattgaagca
     1981 gtcgttcgtt catacaggga ataaggtata ggcaatttac atcaatttat ttaattcacg
     2041 aatcacccgg ctaaccggta aacccattac gttataaaaa tctccgttta ttgattgaat
     2101 gcccacaacg ccgatccatt cctgtattgc ataagccccc gccttatcgt agggctgata
     2161 atgatcaaca taaaaagtta tttgttcttc ggtgagctca tgaaagatca cttctgttgt
     2221 atcagcaaat gctatctcat ttccctcgtg cagcaacaca acgcctgtaa ttacctggtg
     2281 tgttttaccg gataatgctt tcagaatttc gattgcatcg gccctgtcga caggcttacc
     2341 gatcacttcg ttttccagga ctacgatcgt atcggctgcc aggatgattt gttcattgtg
     2401 cggcaagcct tctcttactg cgttggcttt tctccgcgct ataaaaacag gaacttctgc
     2461 gattggcaga tcggccggga agatttcatc cacgtcactc gccacgatgt ctactggaat
     2521 ttccgcccat tcaagcagtt gttttcggcg cggcgatttt gaggcgagaa tgatctttgg
     2581 catggctaaa aataaaaccg aaaaaatatc atggacagaa ttccggtcaa catcacgaat
     2641 ttcaccatag tgctcaattt gtgaaagtcg ccggacgttt gcgcggtgaa aagttttacg
     2701 aagatcattg caagcgggac caggatgaac aagaggcaat aaatagcgct tagccaccaa
     2761 tgaaactgga gtacataaaa ctggagggca aacactactg cgatcagtat tgtcagccag
     2821 acggcgctat atatcttgga aacatttatt cccaacacga ttggcatcgt tctgcaacca
     2881 tacatccggt caccttcgat gtcctcaata tcttttacag cttcgcggat caatgagctt
     2941 acgaatgcaa aacctgcgta aagcatcgtc attctggcaa tttttggagt attgagatca
     3001 cgcggattca ggaaaaaata gatctcgcac cacgttacaa caagtactgt ccatgctgtt
     3061 aagagagaga tcagcacatt gcctgcaagc aatttttttt tcagggaaat ggaataaata
     3121 aaaagaaggc aggcgcaaat aagatttgag aagccgagga aagttactct cgttgtgaaa
     3181 tcaagataga agccgatcgc gatgcccgcc atgcttaaaa aaaaatgcca gacgatcgtc
     3241 catcttcgct taataatatt ttgaacgatc aatctttcag gtttattgat acgatcgatg
     3301 ttcaaatcga aatagtcgtt gatgatgtag ccggctgccg cgatgagcac agacgatatg
     3361 accagcaaag aaaaatgcgc ggggttcaaa aatggttttt ttcctccttc cgaaatcaaa
     3421 ggttggagca cgcaatacat aaagagtatt tgtgtgaggg ctataaaaag caggttaggc
     3481 catctgacca gccgtaagaa tgcagcaact aatctcagct taaaaacgtt tggtgcgcaa
     3541 agtacaaaga aagaaactca aaagatttga aagttatttt gacggaatgt gcgtatcagg
     3601 cgtccattgc tgctgaagtt tcaagacttt ttcgataaca tctctcacgc atccggaacc
     3661 accttcaaac ggcgaaatat attttgaaac gcgtttgatc tccgccactg catttgtggg
     3721 acaacacgcc aatccgcagt attgcattac atcaaggtcc ggaatatcat cgcccatata
     3781 aaggatagat tctctctgca attgaaggct gccgatcaac tcctggagtt ttttcaattt
     3841 gtcttcgacc tgcatgtaga tatggcgcac tccgagtttt tcgagccgca attttgactc
     3901 aggcgaactg ccgcccgaaa taacgattat tgtgtagcct ttttttacag ccaattgcag
     3961 ggcgtatccg tctttcacat gcatccttcg caacattgcc ccgctttcgg taagaaatac
     4021 ggtaccatcg gtgagaacac cgtcgatgtc aaaaacaaat gttttaatgc tattgaaact
     4081 tttgagcatg tgtttattgt taaaaggaaa tgaattgaaa taaaaaaatc ccgcgatggc
     4141 gggactttgt gggagcacac gggatcgaac cgcggaccct ctgcttgtaa ggcagatgct
     4201 ctaaaccagc tgagctatgc tcccttaatt tataggggtt gcaaagatag gcgctgctct
     4261 tttcttccca aatttttttg acgctataaa caaaaatccc gttggagaac caacggggtt
     4321 tgttatgagc aagcaaccga ttgacacttt tttaaacgtc aataggacga caaagtaata
     4381 tttttttcat gtcacataca actgttagtt aatatttttt ttaaataagt ccgcactgct
     4441 attgtggaaa aatagccggt taacttgcag catatcaaat tagctttgaa ggaccgatag
     4501 gaattttcat gaaatatacg caaccatatc tcgataaatt gcaaaacatt cttcacgaaa
     4561 gtgagtacac acttcgttac gaacggggca cttttcaaag cggctggtgt gtgcttgagc
     4621 agaaaaaagt ggtcgttgtc aataaatttt tagatgtcga gggaaggatc aacacgctgc
     4681 tcgaattaat accccagcta aagatcgatt acgacaagct cacgctggaa agccagaagt
     4741 tgtttgaact cgtaaagcct ggcgaacaac aatttacttt tccctcctga gattgcacat
     4801 gccatgcatt agatttgcca tgtgagtgca cccaacattc aggtaaaatt tcttggcaca
     4861 ggcacaagca cgggcatacc tatgatcggt tgtcgttgta aagtgtgcac atcaacaaac
     4921 ccaaaggaca agagacttcg cgcaagtatt ttactggagt ctcctttcac aacgatcgtc
     4981 gtcgatacaa ctcccgactt tcgttaccag atgctccgga ttcaaaatga aaaactggat
     5041 gcagttttat ttacacatcc ccacaaagac cacattgcgg gactcgacga tgtgcgggca
     5101 tacaattttt ttcagcacaa gccaatggac gtatatgcaa atgcgttaac tgcagaggca
     5161 ttgaagcgcg aattcgccta tgtattcgct gacaaaaagt atcctggtat acccgaaata
     5221 aacctataca cgatcgacga aactttttta atgatcggcg atattccaat acaaccgttc
     5281 acagtatggc atcataaaat gccggtatat ggttttcgtt ttaaaaattt tacctatatt
     5341 accgatgcaa ataaaattga tgaacccgta aaagaggtta ttaaaggatc ggagataatt
     5401 gtactgaatg cgttgaggaa tgagcaccat gtcgcgcatt tttcattgac ggaagcggtg
     5461 tccctcgtac acgagttaaa ggttccgaag gcttacttca cgcacatcag tcaccaatta
     5521 ggaaagcatg aatcggtaga aacccaactg ccctccgaca ttcatctcgc ttatgatgga
     5581 ttaacgctcg atatataacc ccttttaccc taaaccactt cttatgatca aaagtatctg
     5641 gaaagattac ttcacttttt ccaaaaaaga acgaaacgct gtttttatcc tcctgacaat
     5701 tttggcagta acgatcgtag ttccttactt cattcccgaa aaaaagctgc gcatcacgat
     5761 cgaccaggac ctgcagcagc aattagatca atacctggca aaacggtcta acgtggccat
     5821 acgcgattcg gttgttgatt cagttgccac cagagaacga tcattttcat tatttgaatt
     5881 tgatccgaac acgttaagca aagaaggatt caaaaaattg ggcctaaacg ataaggtcat
     5941 ccaaaccatc ttcaattacc gaagtaaggg tggttatttt aaagtgccgg atgacattcg
     6001 aaaagtctac gggttgtcag caacagatgc tgaacggctt ctgccatata tcaggatcgc
     6061 ttcaattagt agcaaagaaa gaaattactc gcaggaaaaa catgacaatg aacataatta
     6121 cccgcaacgt tctgagaaga aaattgaaat aaacacggct actgctgatg aatggaaatc
     6181 gctcccaggc ataggagaag ttttaggcaa ccggatcgtg aaatttagaa atgcgatcgg
     6241 gggatttaag tcagtggatc aggtgcgaaa aacatatggt ttaagcgact caacatttaa
     6301 ggcaataatg ccgtatcttg tactaacgga ttctttgaag tgagttgaga aattaatacg
     6361 gatttttaac ggcattatac attacatttg cccgctaaca ctcgttagtt tttatgtatc
     6421 aaatgaacga agtaactcag caaatcgcgc atagcgcgcg tgattttgcg gctcggcaca
     6481 ttaagccgca cgtgatggag tgggacgaga accaggtatt tccgttggat gtatttagag
     6541 agatgggagg tcttgggttc atgggagtgc tggttcccga agaatatggc ggatcaggat
     6601 tatcatattt tgagtacaaa gcgataattg aggaagttgc taaggtgtgc ggtggtattg
     6661 ggctcagcgt cgcggcccac aattctttgt gcaccggcca cattttgtac ttcggtaatg
     6721 aggaacagaa acgccggttt ctgccgaaac ttgcaacatg cgaatggctt ggtgcgtggg
     6781 gccttacaga gccaaacacc ggtagtgatg ccggcaatat gagatgcacg gcgacccgaa
     6841 aggacggcca atggttgatc aatggaacaa agtcatggat cacgcatgga aaaagcggcg
     6901 acattgctgt tgtgattgcc cggacgggtg aaccacgaac gaagaacaat gcgactgcat
     6961 ttgttgtcga aaagggaacc acgggatttt cagcgggtaa gaaggagaac aagctcggaa
     7021 tgcgcgccag cgaaacgacc gaaatgatat ttgacaattg catcatacct gacgaaaatc
     7081 gtctcggtga ggtcggtgca ggtttcaagc aggcaatgaa agtactggac ggtggaagaa
     7141 tatcgattgc ctcgctggca ttgggcattg cgaaaggcgc atttgaagca gcagcgcgat
     7201 acagcaaaga gcgttaccag ttcgatcaac ccattgcaaa cttccagggc ataagtttca
     7261 agcttgccga catggccacg gagattgatg ccgccgactt gctcacgctc agggcatgtg
     7321 aattaaagaa tgaaaataaa aaggtgagtc gtgaagccgc gatggcgaaa tattttgcga
     7381 gcgaagttgc ggtgaaaacc gcgaacgaag cagtccagat ctttggcggc aatggataca
     7441 caaaggaatt tcctgtggag aaatattatc gtgacgcgaa actttgtacg attggagaag
     7501 gcacatcaga gatacaaaag cttgttatcg caagagaaac gctgcagatg ttctagtgag
     7561 cgatcaatcc agaaaatctt cctcatcctt cttcgaatat tttgaaaagg ccttgtcaat
     7621 tgctccgcca aacatcggga acttactctt ggcgaaatcc tttacaatat taactgcctg
     7681 ccaggcctgt ttttcggtaa ggcctgcctc tgccttgagt ttttcaataa gttcctgcat
     7741 aaaagcattt gtttttgtcg ggatgactgg attcgaacca gcggcctctt cgtcccgaac
     7801 gaagcgcgct accgggctgc gctacatccc gaaataaacg ataacattat ttgcttatta
     7861 agcccgcaaa atatttcacc gttctcacca actggctcac ataactcatt tcgttatcat
     7921 accagctcac cgtttttacc aattgctgat cacccaccga caaaactttt gtttgcgtgg
     7981 catcaaacag cgatccgtag tgcataccga taatatcact gctcacaatt tcgtcttcag
     8041 tgtaaccata gctttcgttc gcagctgcct tcatggcggc gtttacttcc tctgccgtaa
     8101 ctttttttcc caaaactgtg gtgagctcgg taagcgagcc ggtcaacgtt ggaacccgct
     8161 gagcagttcc atccagtttt ccttttatgc tcggaataac gagaccaatt gcttttgcgg
     8221 caccagtagt atttggaaca atattttgtg cagctgctct tgctcttctc aggtcgcctt
     8281 taggatgggg tgcgtcctgt gtattctgat cgtttgtgta agcatgtatg gtggtcatta
     8341 gcccggctac gatgccatac gaatcttcga gcacctttgc cattggggct aaacagtttg
     8401 tcgtgcatga tgcgcagctg atgacagttt ctgaaccatc gaggatgtcg tgatttacat
     8461 tgtaaacgat ggtcttcatc tcacctttgc ccggcgctga gatcacaaca cgttttgcac
     8521 ctgcggtgat atgagcttct gcttttgctt tatccgtaaa aaagcctgtg cattccaaca
     8581 ccacatctac atcatggtct ttccatggga tctgtgcagg gtctttctgt gcgtaaattt
     8641 ttatttcatg cccttcaaca gttatcgaat tttcgccggc ctgtacattc ttgccaaaac
     8701 ggccttgtgc gctatcgtat tttaaaagat gtgccagcac cgctggactt gttagatcat
     8761 tcacggcaac cacatcaata tcttccatat caaatatctg gcggtatact aacctcccga
     8821 tacgaccaaa cccattaata gcaactttta ctgtgctcat acgtaagttt taattttaaa
     8881 aggaacgcaa atttacacgg tttgcgttaa ctataattga acagttttct gtgttttgac
     8941 tatcccagat gttacgactc gttgttgcgt ttccaaaaaa gtttgcacat tgcttagcgg
     9001 aaagtatctt tgcgctcctg atagaacggc cggttcgtct atcggctagg acatctccct
     9061 ttcacggagg aaagacgggt tcgattcccg taccggctac aaaggaaagg ttaagtttga
     9121 agccccatgt tcagcgatga atgtggggtt tttttcttcg aattatgatc gccgtttatg
     9181 tcatagaaag tctcagagac ggcacctggt atacaggaat ggcgagagat gccgaacaaa
     9241 gattgaaaga acacaacgct ggaaaaaaca ggttcacaaa gggacacatt ccgtggaaga
     9301 aaattttcac cgaacatcac gacacgtggg ctgaggcaag aataagagaa aaatacttga
     9361 agacgaatgc agggaaaatt tggctgaaaa aatttttgac tgcaagcgga ggaaaggcgg
     9421 gttccctgcc tgcgtgacgc agtcgggcag ggattcccgt accggctaca aaggaaaggt
     9481 taagtttgaa gccccatgtt cagcgatgaa tgtggggttt tttgttttgc gagagcaacc
     9541 ggacagaaca tattcagtat aattttgttt gatctcgaaa taacaattgt atgtcaacgc
     9601 cagaagagat caaggagtta cagcagcgat tggatcaatt atcccgcgaa ctagaagggt
     9661 ataggcaaca attgttcacg ctccggcaac aagtgaatca tctgaatgga aacgcgacac
     9721 ccggtcaacc aaatgcacct aaacaaatcg gtacatctaa acgcaatgcc ggcgttacat
     9781 cagcttcccg gcaaaccgcg ctcgaaaatt tcataggcct tcgggtaatt catgttgtgg
     9841 gaatagtcgt tctgctgatt gggatatcga ttggagtgaa atatgcgatc gaccaaaatc
     9901 ttattacgcc gctttcaaga ataattcttg cttacatggc gagcgcaggt ttgtttattc
     9961 tctcagttat actcagaaaa aattatgaag gcttcagtgc gatcttgttc agcggcgcaa
    10021 tggcatccgc gtatttcact acatacggtg cattcgttta ttatgatctc ttccctcaaa
    10081 catttgcttt cgtcatcatg gcaggcctgg ctgtatatac tgcgataaaa tctatacaat
    10141 ataaccggca ggaaattgca ttactcggga tggttggtgc gtacgcgatt cctctcttag
    10201 tgagttctaa ccacgagaat tacgtactgc ttttcagtta tgtgctcgta atgaatgccg
    10261 gcatcctgta tgtttctttt cgccgctcat ggaaggtcat gaacctgctc gcgctcttca
    10321 taacgtggac gatatttacc gggtggctgc tctttaaata taaacctgca tacaaatttt
    10381 acgcgatcat ctttaccgcc gcttactaca tatcattttt attaagtgct tttgctttcc
    10441 gaattagaaa acacattcga ttgagtcaac gtcagcttct tcatttactg ctgaacaatt
    10501 tcgctttctt tatttcactg ctttcgatat tcgaagcgtc atcttcaaat gcaagagctg
    10561 cggcgattac cggtttttgc gctatcttat tttttgcgtt tgccttagca ggaaataatt
    10621 tttttcatga tgaaaaaatg ctcaacagga tgcattacgt ggaatcattg atccttgcag
    10681 ttttatttgt tgcgatcgaa tggagcggac taaatatcac tttactttgg acactcatct
    10741 ctgtgatcgt tttcgttctg ggcataatca caaaaaccac ctggccgcgc cttgcttcaa
    10801 ttgtgctcct agcgctcacg ctgctgaagc tgatgataat cgacagtctg tcgtttacgg
    10861 cggttcaaaa aataattgca tacctaacaa ttggtacgct gttactcgtg atctctttct
    10921 tttatcagaa attcaggcag atgctgtttg agaatgcaga aaatgaaaag atctaggcga
    10981 caggacctgc atgtaaggga tcatgcaatg ctgcattaaa ttcattccaa acatcgttga
    11041 ctatctcggc ggcaggttta atgtctttga tcaatgcact tacttcgccg atctcaagtt
    11101 cgccttcttc gagatcacct tcaagcattc cccgcttcgc gcgtccacgt cccagcaatg
    11161 ccgctaattc ttcctttgtt gcaccacggg actcagcttc ctgtatggat tgaaaaaatt
    11221 tatttttaaa taaacgtacc ggaacgatct ttttcatgct aagcatcgta tcgccctctt
    11281 ttgaattcac caatgcctcc ttgaatgaag gatgatttga tgcttcatta ctgcacacaa
    11341 accgcgtccc gatctgcaca ccttcagcgc ccattatcat ggctgcaagc atttgccttc
    11401 cggttgcgat accgcctgca gcaagaaccg ggattttcac cgcttcccgc actgcaggaa
    11461 tcaacaccat gctagtcgtt tcttcccgcc cgttatgtcc acctgcttcg aaaccttcag
    11521 caaccactgc atcgcagcct gcatcttccg cctttttcgc gaaggcgctg ctactaacta
    11581 cgtgtacgac agtgatgcct ttttctttca aaaccggggt ccatgttttt ggattcccgg
    11641 cgcttgtgaa aacgattttt atttgttcgt cgatcactat ttgaatatgc ttgtcaatat
    11701 cgggatacag taaagggatg ttcactccaa acgacttcga agttgccgcc ttgcatcttt
    11761 gaatatgcag ctttagaata tcgggataca tgctgccgct tccgatcaaa cccagcgcac
    11821 cagcgttgct aacagcgctc gccagcttcc atccgcttgt ccaaaccatt cccgcctgaa
    11881 cgatgggata atcaacattg aagagtttgg taattctgtt agagaatgcg cccatcattc
    11941 aaaagtaaac gaaagatact ttgccggcat tcgataaggt aagacgactt gttaggggaa
    12001 gttgatcatc caaagtccag ctctgtattg tcgccaatat tcagcgtacg gctaagccct
    12061 tttacgcttg catcactgcc gatgagagag ttgtcaagaa ccacttcaaa aagatttgtg
    12121 taagaaccga tgatgctgtc gcgcacgacc gaatattcaa gtgttgtgtt tggtcccaca
    12181 gagacgtgag gcccgacgat agaatttttc aaccggcatc cgttacctat actgacgggt
    12241 ggaataatga tcgaattttc agacaaaaga ttttcgtcaa tagtgccgcc gaactttttt
    12301 aaaagtgttg tgttactttc aagcagcgtt tcttttttcc cgcagtcgaa ccagttcttc
    12361 actttgaatg acttgaattt tgctccgcgg cggatcatac agtcgagggc atcggttaaa
    12421 tgatattcgc catagcttgt aatattctga cggaacaact gctccaggca ttcaaataat
    12481 atacaagtgt ctttgatctt gtagatgccg accaatgcca tattactttt cgggatcgcc
    12541 ggcttttcaa taacatggtc tatgtatcct tcttcgctta actcggcgac gccaaagctt
    12601 cttggatcat ccactttttt tatgccgagc atattgcagg ggcattccat tacttctttg
    12661 atattataat cacagatcgt gtcgccaagg gtcactaaaa cttcatcgtt gccaactatc
    12721 gtttttgtta gttccaccgc atgacccgtt ccctgccgct cgttttgata aacgaaatga
    12781 caagtaagat cagggtacgt ttgcagaaca tattcatgga tcttttctcc caggtaccca
    12841 acaatgaaaa taaattcatg gattcccgca tcacgcagtt ggtcaacaat gaaacttaaa
    12901 attgttttgc ctgcaatcgg tattaatgcc ttgggctgtg tataagtatg gggccgcaat
    12961 ttggcgccgg cacccgccac aggaataata gctttcatct tgtttttttg cttcgtcgtc
    13021 cgctcagtgt gtcccttcta cacattttag ctggggcgtg aaattagcaa ctttttttta
    13081 gagctctgat ttctactcaa aaccacagtt ttataacatg ggtgttattt gaattcaaac
    13141 taccttttat tagtaaatgt tgctttagaa gtcaagcttc atttcttatt ctgcacaaaa
    13201 cggcaaaccg cgtacaattt cgataaaaat tgcgggcaga cgttttttgc ccctccatag
    13261 agatacagaa catgcagcac gcaaaatttg ctgccaatca ttccggacaa tatctttgca
    13321 catggcaaca atagttaacg ctccacagaa ggtaaagcat cctcgttttt ttggtgaagg
    13381 tcttacgttt gatgatgtat tgctgctgcc ggcttacagc caggtacttc cccgcgaaac
    13441 cgaaatctct acaaagctta ccaaatctct tcggttaaat attcccatgc tttccgcagc
    13501 gatggacacg gtaacggaag ctaatcttgc gatggcgctt gcgcgcgaag ggggacttgg
    13561 tattttgcac aagaacatgt ctatcgagcg ccaggctgag caggttagaa aggtgaagcg
    13621 gagtgaaagc gggcttataa tcgacccgat cacactacac gccgatgcaa cgatagcaga
    13681 tgcactgaag ctcatgaaag aaaacaagat tggtggtatt cccatcgttg acaagaataa
    13741 ccttttggtc ggcattctca ccaaccgcga cctgcgtttt gaagatgata aaaagaaaaa
    13801 agtgagtgaa gtaatgacga aggaaaatct catcacagct cccgatggaa ctgatcttaa
    13861 aaaagcggag acgatcttta ggaggtataa gatagaaaaa ttgcccgtcg ttaataaaga
    13921 gggaatgctg acaggcctta tcacataccg ggatatcctt caacttcgca attatccgaa
    13981 cgcagtgaaa gatgcctttg gaagattact tgttggtgcg gcgctcggaa taacaaagga
    14041 catcaacgat cgggcctccg ctttgatgca tgtaggggtg gatgcggtta cgctcgacag
    14101 cgcacatggt catagtaaag gcgtgattga tgcattaaaa tctttaaaga aaaatttcaa
    14161 gaaactccag gttattgccg gcaatattgg gacggccgcg ggtgctaagg cattggctgc
    14221 cgccggtgcg gatgcggtga agatcggcat cgggcccggt tcgatttgta caacccgcat
    14281 cgtggccggc gccggcgttc cgcaacttac tgcgatcatg gaagcagccg gggcgttacg
    14341 tgagtcaggc actccgctga tcgcggacgg cggtattcgt tatacaggcg atatggttaa
    14401 ggctttggct gccggtgcgg acaccgtaat gatgggtagt atttttgccg gcgtagaaga
    14461 aagtccgggt gaaaccatca tatatgaagg ccgcaagttc aaggaatacc gcggcatggg
    14521 aagcattgcg gcgatggcgc agggaagcag cgatcggtat ttccaggatg ttgaagatga
    14581 cataaagaaa ttggtccctg aagggattga aggcagggtg gcatacaaag gatatttgag
    14641 cgaagtagtg gcgcaattta ctggtggcct tcgctcaggg atgggatatt gcggcgcgaa
    14701 aacaatcagc gacctgcaaa aagcccggtt tgtaataatt acaaatgccg gcatgcgcga
    14761 aagccatgca catgatattg aaataacgag agaagctcct aattacagca ggagttgaaa
    14821 ttggagccgt tagaaaagaa gatcattact ctcataagat aatttcccat ttacgatttt
    14881 agctggttta gtgtaggggt gctcctcctt tttacctgct tccataatat ggtaaactat
    14941 ccagccattt attttcagat aatctgaaac cagcgaacgg tgacaacgcc accaaacggc
    15001 ctctgagcac atgtatgcgg ttcggttttt tgaagcaatt tcttcgagct cgtcaattcc
    15061 ttttttgaaa tcgtccgttt ccatgtaatc ggcgtatcct ctgaaagcag gatgtttcca
    15121 cgcagtgttt tttgaatgac ggtctacacg ccttctgccg cccagcgttt gaatatgaat
    15181 atacttgatg ccgcttgccg gcaatgatgt ttgtagtgct tctttattaa aatgcggata
    15241 tctttttgaa ccgggaaaac tgcgaatgtc tgctactgtt tcgatgctga aagattgcag
    15301 catcgaaata aaatgatcaa gcgtgcgggt tgaatgaccg atggtccata taacttttcc
    15361 tgttgtactc acctggttaa attgcaacta catgccgaat tgccgcagtt tttatgagcg
    15421 ttgtgacggt tatattttaa gagcgaacaa ttctatttcg tttgcttttc cctttaattc
    15481 caccatgccc aaactttcgg tgtgccagtc tttgagatca ctggcttcga caaaatcttt
    15541 cgacacaata aatttctgat tcagttcact gcaggcagtt cttatcctcg cagcagtatt
    15601 catagtgtca ccgctcatag cgacgtcttt ttttataacc ccaatttctc ccaccgttac
    15661 ttcgcccacg tgaatgccca ccctgaattc cggcagaatg ccgtataatc tcctgaaatg
    15721 ctcgtgtcgt ttgttgagat tacggcgagc ctggatgagc gccttcaggc atttttttgt
    15781 gttgtcttca ttaaacaacc aggaaaccac aatttcatca cccacatatt gatatatcct
    15841 tccgccgtat tctatcaaag cgtttgaaag atggtaaatg aattcgcgaa tgaacctgaa
    15901 atattgctgg cttccgagct tttccgctat gggtgtcgaa tcttttaggt ccatgaacat
    15961 gatgatcctt ttctcaattt tcggatgaac gtatttgccc aaaagaatat ccataaagac
    16021 accgggggaa tatttttcat ttaattctat gataagttgg gtgatcacga aaagaatgag
    16081 ccagtataat aatttttgaa gcaggttatg gatatcggaa aagtcgtcgt aaaaatgatg
    16141 aaaagattct gatatgggta agcccaggag ggtgatggaa ctgatggcgt aaattaaaag
    16201 gttaataaga aaagctgcga cgatcagtat tacgcttttg atcaaaaaag cggtcagcaa
    16261 attaaaatca cggaaaagcc ttcttaattc ggtcacaagg agaaagccca cgcctacgct
    16321 tgaagcgaat acgatcactt cacgcagcaa gagggtatta aatgagtttt cttcaggcag
    16381 ggtattgaat acaagaacga ctacaatatc gatgagcgtc cacagcagcg caatagaaac
    16441 aattgtattg aaacgatatc gacgtaccgt gctgatctgg gtgaaaatac ttttggcaga
    16501 tttcattggc tttcctgtag ataatggtaa atggattgtt gtgcgttgat cctgggaaag
    16561 ccattggcat cgatgcggtg ctgttcgagg ctggaagtaa gctcagtcat cttatcattg
    16621 tcgctccatt gaatttcaaa ataatcaatc aactcctttt tgcaatccgg attgcttata
    16681 gaaacacata cttcaatgcg actgtgcagg ttcctattca tccagtctgc agaacccatg
    16741 ataacttccg cagagttgcc tgtcccaaaa atgaacagcc tcgtgtgctc caggtaacgg
    16801 tccacgagcc ttctgacaat tatattatca ctcagaccag cgactcccgg aacaagacag
    16861 caaacacttc ttacgatcaa ataaatcttg acgccggcct ggcttgcttt atataaatgt
    16921 gtgatgattt ccggctcttc aagattattt atttttatcc tgatgagcgc ttcctctcca
    16981 cgcgcagcct tttctttttc tgcatcaatg agctttacaa aacgatcgta catattaaac
    17041 tgcgacacga gcaatttttc aaatttcatt tttgctttag cttctacatc attttttttc
    17101 agaaaatcaa acaaagagac caactcagtc gtgatggttg ggtcggtggt catcaaaaca
    17161 tgatccgtat aaaattgcgc agttacctcg ttgaagtttc ccgtactcaa aattgcgtac
    17221 gataaagttt gaaggcctga ttgttttttt atgaggccga tctttgaatg cacttttata
    17281 tcaggctgac tgtaaattat attgatgccg gcctgtttca ttgttttgct ccacctgata
    17341 ttattcgcct cgtcgaaccg tgccttcaat tcaataaaaa cagttacacg ttttccattt
    17401 ttggcagcac tgatcagcgc atttacgatg tgcgattctg ctgctacgcg gtaaagggta
    17461 atatacatct cagtaacctt tgggtctacc gcggcctggt tgaaaaaagc gagcacgagg
    17521 ttatatgaat gatagggaat gtgcaacagt atgtcctgcc tgtcgaggac attaaaaacg
    17581 tctccactat cgat
//
LOCUS       DASQJI010000362         3237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_348451,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000362 DASQJI010000000
VERSION     DASQJI010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348451"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..1635
                     /locus_tag="VEV83_10145"
     CDS             181..1635
                     /locus_tag="VEV83_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK45518.1"
                     /translation="MTKVLVIDDDRDMCLLLKKFLERNSYEVIDFTSGKKALAWYEEN
                     TPDIVLCDLRLEDMSGLEVLQKMKAVNPSLPFLIITGYSDVKTAVEIMRHGAYDYITK
                     PLFPDEILMTIKQALENGGKSSAPVQVQKDKTDTTAKPAVEFAMSEDYVVGTSPIFQQ
                     ILKQISLVAPTNYSVIIYGETGSGKEAIANEIHKHSKRAKEPFIAIDCGALSKDLAAS
                     ELFGHEKGSFTGALNQKVGSFELANGGTIFLDEIANLSYEVQVSLLRVVQERKMRRVG
                     GTKDIDLDVRIIVASNEKLWNATQSGKFREDLYHRFNEFSIEIPPLRDRREDIMHFAN
                     HFLYITNQELEKNVRGFSPDVTNAFINYVWYGNLRELRNVVKRAVLLTDGDMVELKSL
                     PFEITNYEKLNELIPSEVSNVNSAPDIAQPLPQKPRSNDLNLKSASIDAEYETILAAL
                     KQVNFNKSKAAKLMKIDRKTLYNKIKEYQMLNSK"
     gene            1749..3191
                     /locus_tag="VEV83_10150"
     CDS             1749..3191
                     /locus_tag="VEV83_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45519.1"
                     /translation="MTIPNINVLIIDDDEDDYFITSDYLKNIPGKNFVIDWCYNYKNA
                     LDEIKKEKHDVYLVDYRLGVKTGIDLIKEAMRLDADAPFILLTGKGDIHIDEEAMRLG
                     AFDYLVKAELSSEKLERSIRYSIDRARTLNELRAKEKKYRNIFDKSSDALFVADDKLF
                     FTEVNGAFGKLLSCDEDFLLKIKLPELLTDNHLARKLAEEVKHKGYIEGWQAEVRYKS
                     NEPKQCIVSATKERSAEGKTYYQGILHDISLIKKAERATLRAEKLAAAGRLVRTLAHE
                     VRNPINNINLASEHLRSSNLPDDTGLYLDIIHRNSERINELIKELLNSSRPSEMQLKE
                     STLQSLIDDIVNASRDRINLKNIGLQVDYPRDLIIIQCDYEKMVIALLNILINAVEAI
                     EHNNGRISINARKEKELCMIEISDNGTGISEEKLPRLFEPYYTSKRNGIGLGLAATLN
                     IIQAHNGVIEVNSEVNKQTVFTITLPLKPQ"
BASE COUNT         1067 a          622 c          755 g          793 t
ORIGIN      
        1 acgttcgaaa actttttaaa aaggttcatt tgtggagaaa aatctacgtt attatctgcg
       61 tatctttatt cggccagtca aaagttcgtt tcaggagtta cacaaaattg gtctcttact
      121 tgcatattgt gttaactgaa aaacgaaaat aattgataat caccacaaac aatttcttac
      181 atgaccaaag tattagtgat tgatgatgat agggacatgt gtcttctttt gaaaaaattt
      241 cttgaacgta acagctatga ggtaatcgat ttcacgagcg gcaaaaaagc gctagcctgg
      301 tatgaggaaa atacacccga catcgtttta tgcgatctgc gtttagagga catgagcgga
      361 ttagaagtgc ttcaaaaaat gaaagccgta aacccctcgc ttccgtttct tattataacc
      421 gggtacagcg atgtgaagac tgcggttgaa ataatgcggc acggtgcata tgattacatc
      481 acaaagcccc tgtttcctga tgagattttg atgaccatta aacaagcatt ggaaaacggc
      541 ggaaaatcca gcgcaccggt gcaggttcaa aaagacaaaa cagatacaac agcaaaacct
      601 gccgttgaat ttgcgatgtc tgaagattac gtggttggaa cgagccctat attccagcaa
      661 atattaaaac aaataagcct agtagccccc actaattaca gtgtcattat ttatggtgaa
      721 accggtagtg gaaaagaggc tatcgcgaat gagatccata agcatagcaa gcgggcgaaa
      781 gaaccgttta ttgcgattga ttgcggagcg ctaagcaaag acttggctgc aagcgaactc
      841 tttggtcatg agaagggatc ttttaccgga gcccttaatc agaaggtcgg aagctttgaa
      901 cttgcaaacg gaggtacgat attcctcgat gaaatcgcaa acctttccta tgaagtacag
      961 gtatcgctgt tgcgcgtggt acaggaaaga aagatgaggc gcgtgggcgg tacaaaggat
     1021 atcgacctgg atgtaaggat cattgtggcg agcaatgaaa aattatggaa tgccacccag
     1081 tcggggaaat tcagggaaga tctttatcac cggtttaatg aattcagcat tgaaattccg
     1141 ccgctgcgcg accgcaggga agacataatg catttcgcga atcatttctt gtatatcaca
     1201 aaccaggaac tggaaaagaa tgtaagaggg ttttcacctg acgtaacaaa cgcttttatt
     1261 aattatgtat ggtacggaaa tcttcgtgaa ctccggaacg ttgtaaagcg ggccgtgctg
     1321 ttgacggatg gtgacatggt ggagctaaaa agtcttccgt tcgaaataac aaattatgaa
     1381 aaattgaatg aacttatacc ttcagaagtg tcgaatgtaa attcggcgcc ggacatcgcc
     1441 caacccctgc cacagaaacc gcgctcaaat gatcttaatc tcaaatcagc gagcatcgat
     1501 gccgaatatg aaacgatcct tgctgcactt aagcaggtga atttcaataa gagcaaggcg
     1561 gctaaactca tgaagataga caggaagact ttatacaaca agatcaagga gtatcaaatg
     1621 cttaacagca agtgattgca actaaaaaat tatttgcaac accatccccc ggccatgctg
     1681 ttttgtaacg aatcgtttag aagcgatcga atgctccttt tacttaagaa aactttttca
     1741 agaacgagat gacaattccg aatattaatg tcctgataat tgacgatgac gaagacgact
     1801 atttcattac aagcgattac cttaaaaata taccaggcaa aaactttgta attgactggt
     1861 gttacaatta taagaacgcg ctcgacgaaa taaagaaaga gaaacatgac gtgtatctcg
     1921 tcgattacag gcttggagtg aagacaggaa tagacctgat caaagaggct atgcgcttgg
     1981 atgcagatgc accgtttatc ttacttacgg gaaaaggcga tattcatatt gatgaagagg
     2041 cgatgcggct tggtgcattt gattacctgg ttaaagcaga gctcagcagt gaaaagctag
     2101 aacgatcgat ccggtattcg atcgatcggg cgagaacgct aaatgaatta cgcgcgaaag
     2161 aaaagaagta caggaacatt ttcgacaagt cgagcgatgc attatttgtg gcagacgaca
     2221 agttattttt tactgaggtg aatggcgcgt ttggaaaact gctttcatgc gatgaggact
     2281 ttctgttgaa aataaaattg ccggagcttc taacagataa tcatctcgca agaaaactgg
     2341 cagaagaagt gaagcataaa ggatatattg aaggctggca ggcggaagtg cgttataaaa
     2401 gcaatgaacc caaacaatgt atcgtttctg caactaagga aagaagtgct gagggcaaaa
     2461 cctattacca gggaattttg cacgatatca gccttataaa aaaagcggaa cgggcgacgc
     2521 tgcgtgcaga gaagttagca gcagcaggac ggctggtaag aacgctggcg catgaggtga
     2581 gaaatccgat caataacata aatctcgcat ccgaacatct tcggtcttcg aacctgcctg
     2641 atgacacggg cttatatctc gatatcattc atagaaatag cgaacggata aatgagttga
     2701 tcaaagaact gcttaacagc tctcggcctt ccgagatgca gctcaaagag tcgacactgc
     2761 aatccctgat agatgacatc gtgaatgcgt cgcgcgaccg gataaatttg aaaaatatag
     2821 gcctgcaggt tgattatcca agagacctga tcatcattca atgcgattat gaaaaaatgg
     2881 tgatagcgct cctgaatatt ttaattaatg cggtagaagc aatagagcac aacaatggaa
     2941 ggatctcgat caacgcacga aaagaaaagg aactttgtat gattgagatc tcggataatg
     3001 gaaccgggat cagcgaggaa aagctgccac gcttattcga accgtactac acgtcgaagc
     3061 gcaacgggat cggccttgga ttggctgcca cgttgaacat tatacaagcg cacaacgggg
     3121 taatagaagt gaattccgaa gtgaataagc aaacagtatt tactattacc cttcctctca
     3181 aaccgcaatg atcgtatcaa caatttggac gttgtgctgt ggaagataat gctcaaa
//
LOCUS       DASQJI010000363         3009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_194930,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000363 DASQJI010000000
VERSION     DASQJI010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194930"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..2196)
                     /locus_tag="VEV83_10155"
     CDS             complement(373..2196)
                     /locus_tag="VEV83_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45520.1"
                     /translation="MRTLLLFVLLGICVNLHAQYFQRYFNEVVTAPPKRVEAFSDGLK
                     SRANYGGGIPTKYYFAATGSSELSPTPPTGTDARLRLVRTTSNGTVAVNNGYQFGDVS
                     PKWYESRGNGICEVFNGAGTGGYVVVGQVSDNPAANARGIAGGSDIFFGMFNNGGNST
                     SRERIDVNGGFDVATGVIRSRFIKGTFLLCGYSNHGNYTDAVVARISSSGAVLWLRSV
                     DLLAAGVTCGTTSKAIANSICEDSLSGYIYVCGRVSGHKQAQDQDGFVFQVTPAGAPT
                     WAMSHDQAGATDEYRDIKFTSTGGILVCGFSNVPAQGVGAFNDVWLSLFTPAGVLTWT
                     YKHRFSSPLQETKGYRVIEGKYLAGSGTRYYVVGSIYPSVGGSPYQMMLEIFGGGVGG
                     GTYHVYPPPYGPLGVSDRFGLDSVEMNMPSPGLMIFSSTVQPPTGLLSNSYMLKTYYN
                     GATCKDFCTSYPDAFISVYPSSQMAFCVDTSYKTQKMKYITYKYDSATICSEKKVKCG
                     SNNTPLGEAVQEETPVGNEMRLTPNPANSILNIGLTVFKDGSYKAEVIDVNGRAMMSS
                     VVQLRAGNSSANINVGTLRKGYYTLRLTGDGKVWTKQFMKE"
     gene            complement(2716..>3009)
                     /locus_tag="VEV83_10160"
     CDS             complement(2716..>3009)
                     /locus_tag="VEV83_10160"
                     /inference="COORDINATES: protein motif:HMM:NF042672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6624 domain-containing protein"
                     /protein_id="HYK45521.1"
                     /translation="MMREAVAKKQAHPANLALLEDRVAIREGRKQIYGSQVATDTTTG
                     KNFLLPLEDPDNVDARRASVGLGPLADYLKSFDVEWDVDEYKKQLAEKEGKKE"
BASE COUNT          723 a          745 c          663 g          878 t
ORIGIN      
        1 ttctcctgcc tggccttcgt tcagcctgag gcggattgca agcaattttt ttaacccgat
       61 cagcatgctg tatgttgcga ggaatcttta ttgcagttgg cttcagccaa ctggagaaag
      121 attaaagaac aaccgggctt tagccctggc ttttgcgcag aaacattttc agtaaaaaat
      181 tagctgctct tcttcctttt cgaaagatca gtttttgcaa agcgaagacg cgacgcttct
      241 atggagcacc taagtcgcac gatatgagct ggcatagaga gcttcacaca gcatctgcgg
      301 aaatctgtga gatctgtgag agcatatatc gcgtgcccgc aggccgtgtc atccgccttc
      361 tatcctatcc cgctactcct tcataaactg ttttgtccac actttgccgt cgccggtcag
      421 tcgcagtgta taatatcctt ttcgcaatgt gccaacattg atattagccg aagagtttcc
      481 tgcacgtaac tgaaccacgg acgacatcat cgcgcgtccg ttcacatcaa ttacttccgc
      541 tttgtacgaa ccgtctttga aaaccgtaag tccaatattc aaaatactat ttgccggatt
      601 tggcgtgagc ctcatctcat tgccgacggg cgtttcttcc tgcactgctt cgcccaacgg
      661 tgtgttgttg cttccgcatt tcactttctt ctccgagcat atcgttgccg aatcgtactt
      721 ataagtgatg tatttcattt tttgcgtctt ataactggta tcgacacaaa atgccatttg
      781 agatgatgga taaacgctga tgaaagcgtc gggatacgag gtgcagaaat ccttacacgt
      841 cgcgccatta taatacgtct taagcatata ggaattactt aataacccgg tgggcggctg
      901 tacggttgac gaaaagatca tcaagcccgg agatggcatg ttcatttcta cagagtctaa
      961 tccgaaacga tcgctgactc caagtgggcc ataaggcgga ggatagacgt gataagtgcc
     1021 gccgccaaca ccgccgccaa atatttcgag catcatctgg tacggcgatc ctccgacgga
     1081 ggggtaaatc gaaccgacta cataataacg cgttcctgac cccgcgagat attttccttc
     1141 aattactcta tatcctttcg tttcctgcaa cggcgatgag aaccggtgtt tataagtcca
     1201 tgtgaggact cccgcaggag tgaacaaact cagccaaaca tcattgaatg cgccaacacc
     1261 ttgcgccgga acgttgctga acccgcacac aagaataccg cctgtggaag tgaatttaat
     1321 atcacggtat tcgtccgttg cgccagcctg gtcgtgagac atcgcccatg taggtgcacc
     1381 agcgggtgtg acctgaaata caaatccgtc ctggtcctga gcctgcttgt gacccgaaac
     1441 ccttccgcaa acatagatgt accctgaaag gctgtcttca cagatactgt ttgcgatggc
     1501 cttcgaggta gtgccgcaag tgacgccggc ggcaagcaga tcaactgacc gcagccaaag
     1561 cactgcgccg ctgctgctga tccttgctac aacagcatct gtatagttgc cgtgattaga
     1621 atacccgcac aacaaaaaag tgccctttat aaacctagag cgaataacac ccgtggccac
     1681 atcgaagcca ccgttcacat cgatccgttc cctggatgtg gagtttccac cattgttgaa
     1741 cattccgaag aagatatcgc tgccacccgc aattccacgt gcgttggcag ccgggttgtc
     1801 gctcacctgc ccaacaacaa cgtaaccgcc tgtgccggct ccgttgaaca cttcgcagat
     1861 accgttgccg cgcgattcat accattttgg tgaaacgtcg ccaaactggt atccattatt
     1921 cacggcaaca gtgccattcg aagttgtacg tacgagccgt aaacgcgcat cagtgcctgt
     1981 tggcggagtt ggagacaatt ctgaagagcc ggtcgcggcg aaataatatt tggttggaat
     2041 accgccgccg tagttcgcgc ggcttttgag tccgtcacta aaggcctcca cccttttcgg
     2101 cggagcagta acgacctcgt tgaagtaccg ttgaaagtac tgagcgtgaa gattcacgca
     2161 aatgccgaga agaacgaata gtaagagtgt tctcattttt tggtttttat tggttaaact
     2221 atttatttaa aaatgggagg gaaatgcagc aggcattcca ggaatggatt ttactggcag
     2281 gtaagataga aattttattt cagattaaaa tttgccgtga aggaattttt tcgattgcag
     2341 attggcgatt tcagattgca gattgcagat tgcagatttc agatttcaca atgcttacta
     2401 cgtagacggt tttgagtttc ctttttttta atttatttag atcttgtgat ttgtttcttg
     2461 aattttattc tccctggtga ttttctttct gaagtttctg ctccagggag acagcttcgg
     2521 agtttttcat tttttattta tttggatctt gatatttgtt tcttgaattt ttattctgcg
     2581 cttgatttgc tttctgaatt ggcgacgctt ttaaagtttt gtcattttaa tttctttgga
     2641 tcttgatatt tgtttcttga atttttattc ctaaatctcg cacttcattt ccatcttcag
     2701 ccggtacact ccgtctcact cctttttccc ttccttttca gcgagttgct ttttatattc
     2761 gtctacgtcc cattccacgt cgaaactttt caaataatca gccaaagggc ccaaccctac
     2821 cgacgctctt ctcgcatcga cattgtctgg atcctccaac ggcaacaaaa aattttttcc
     2881 ggtcgtggta tcggtggcta cctggctgcc atagatctgc tttcttcctt cccggattgc
     2941 aacgcggtct tcaagcaaag cgagattggc cggatgtgcc tgtttttttg caaccgcctc
     3001 acgcatcat
//
LOCUS       DASQJI010000364        16711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1730042,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000364 DASQJI010000000
VERSION     DASQJI010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 16711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16711
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1730042"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VEV83_10165"
     CDS             <1..527
                     /locus_tag="VEV83_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK45522.1"
                     /translation="KDCVWGKKWLAEQDYIDSNAIGIYGGSYGGCMVLNALCFYPDEF
                     KAGVDLYGVANWLRTLRNIPPYWESFKKALYDEMGDPNTADSIMLKNTSALYNYQKIT
                     KPLIVFQGANDVRVLKVESDEIVEGVKKNGVPVEYVIYPDEGHGFVKKENLVTTDKRA
                     LEFLEKYMKPKTAG"
     gene            636..3689
                     /locus_tag="VEV83_10170"
     CDS             636..3689
                     /locus_tag="VEV83_10170"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45523.1"
                     /translation="MVMILFSAFWKRSSAADLLKYFFSTPLLFFWIDVALAQNNFSFR
                     HITSADGLTSNNAGKIIQDSRGFLWIGTQDGLNMYDGQTMKQYYLSDYVPAQANSNTV
                     SGVAEDADHNILLAAKAGIIKFSWDTKQFSVAYKNSFTGFGNVAPDLFVDAEKNIWVN
                     ERVRIRKFDPHFHLLHTWNLRDSTNSKNLNGPSVTFICGEDVDHDVWFNDSSSIFRID
                     ATTNLIDSSENQKLKNINRHYDHAELLCFSHGSVWMIESEHILVHLTSSFQFIGSFEL
                     SKQIIPFYSGVIEQNEKVWIATHFNGVFELDIRTGHSQHYGENNSLSSDNVSNITKDL
                     YGNIWISTFGGVDELLANSSFFKQLTFDIPTDSIAQKSIIHQTFFKHNALFTFMSNGI
                     MRTKLETNESTYFFDPGKKNWEGVYYSSAAPFADKWLVSRHRDVEILAFKNNRLFFST
                     PSMPHPSELDSSGVVSFYEDHEKNIWMGLVNERGIVCWRTSNNSFSVYSQRDTGKNYC
                     PLRHLSYAAEDAKGNIWMGYDKGGLAMFDKMQNRFVPIPSSHGNSISNAAVSGITSDG
                     QNLWISTSAGLFQYNEPGNSYRVFTRKEGLPSNFVKSIIADDAGHVWMGFEGALAELN
                     VSSKAITTYNTVDGLPGEDLENPFYDPASETMFFCTDRRVIYFNPRQAIKVIPPINPV
                     VTSLQVMGREEPVSLNKKLAIPYSRNYLSFAFSAPNFLNGSETEYACKLEGADKSWSY
                     LGNHHFASYSQLQPGDYVFKIKARVKGGNWQETTTPLEISILAPFWRTAWFWIACIVL
                     FLSLVFSFIYLRLRSNFEKRILSQSIRDKIAGDLHDDIGSTLSSISILSELAKQDTSR
                     VAAYLESISRNTSLMQENMSDIVWAINPKNDRFVNIIQHMSQFAAEVLESKNIEVNFN
                     SDESLSSRMLPMEKRKDFYLFFKEAINNCAKYSGADRVEILISCSQQKISLQIADDGK
                     GFDTTIDHKGNGMSTMQKRAAELGGNMKLVSAPGNGTTIVLDFPV"
     gene            3714..4418
                     /locus_tag="VEV83_10175"
     CDS             3714..4418
                     /locus_tag="VEV83_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK45524.1"
                     /translation="MIAHLPILDFFCEEDMSAEPSSNEINVAVFEDNDQLRESLSQLI
                     DNAGGLHCTGAFADANQLERKITKSKPDVIIMDIDLPGMNGIDAVSAIHEKLPSVRVL
                     MQTVFDDNDKIFAAIRAGASGYILKKAAPAKIIEAIRETYNGGAPMTPSIAEKVLKMF
                     RIQTQETNAEKIDLSDREKEILSLLVKGRSYKMIAADCFISIDTVNSHIKNIYEKLHV
                     HSKSEAVVKAINQRLI"
     gene            4618..6765
                     /locus_tag="VEV83_10180"
     CDS             4618..6765
                     /locus_tag="VEV83_10180"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45525.1"
                     /translation="MKNAQLLCLVILFSVFATISFAQNTFPSTGAAGIGTTTPDVSSL
                     LEIKSTSRGLLIPRMTQTQRNAIGSPAAGLMVYQTNNTPGFYYYDGGKWTAVSPKGVN
                     KSLSNLTAPTGLNVDLLPGADSSINLGSSSLNYRNIFFKGKLYQGSIPIMYNDTMNTF
                     VGQNAGSNSSYFSTAVGSGALSNTTNARNAALGYQALHSNTSGNKNVAIGSFALTSNT
                     GGSYNTAIGDAALYSNIGGYYNTATGWQALAFNTTGSSNTANGYSALGNNTTGEDNTA
                     IGINALLLDTTGKYNTATGAAALEFNRSGNENTADGDFALFLNTTGFSNVAVGTNALH
                     SNQTASNLVAVGDSALYNSTAASYNTAVGSKAGYTTQNSTNSYFGWRAGYYDNAPSNV
                     AIGYQAGWLVANGSGSTNVGYQAGPAFSGYTNTTGIGFNVTPTASNQVWIGNTAVTSI
                     GGQVGWTTFSDGRFKKNIKQNVPGLAFINQLKPVTYTLDLSNLKKSKGEDKKEIAGNS
                     KNLPDNSFQENKVHTGFIAQDVEAVAKKMNYDFDGVDAPKNDKDFYGLRYSEFVVPLV
                     KAVQELSKQNDSLKQNNQALSDKLNALSNKISLIENAMSQCCSSFSSAMQADADNEPF
                     SKISDQPALEQNVPNPFNRSAYIKYYIPSGAKNAAIVVSDVNGKQVKQFSALSNGNGS
                     ITIEGGSLSSGTYMYTLVIDGKSTATKQMILTK"
     gene            6854..8923
                     /locus_tag="VEV83_10185"
     CDS             6854..8923
                     /locus_tag="VEV83_10185"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45526.1"
                     /translation="MKTTTLILSSLLFLQFAGRAQNTFPSNGAVGIGTTTPDASSLLE
                     IKSTVKGLLIPRMTQTQRNAIATPATGLLIYQSDHTSGFYYYSGSAWTAVTQKSKGWS
                     LTGNSGTNPSTNFIGTTDAQPFLIKVNNQLSAYLDYNSSNSTGFGYQVLGTNSAAAGN
                     QAFGYQALHSNTGGYQNTAIGGGAMYSNTTGGYNVAVGVSALSANNGFSNTAVGQRAM
                     YTNTGGGNNTAIGFNSLYSNTTGNYNVANGDHAGSDNTAGSNNIFIGKNAGIGSQTGN
                     GNICVGQGSTVSNGISNSIVIGNSLSTASNNAVILGGTAQNVGIGTTSPTSISQLTVN
                     GGSKYYSIYAENHYTGSGGGITINATTDKGGGWGVYGESTGATSSDINIGVYGYANGS
                     TYQVAPPGSVFTFNANYGVLGDGGQNGIAGDFNGSIAVYGGVYSSSDAKLKKNIKQLN
                     DVLTRIKLLPVKEFDFDQDVAKQNKLNLPLSHQFGFLAQDVQKVFPNLVAGITALKID
                     DTRKNEPKLKGTTGFLAVNYISFIPLLTKAVQELSSQNESLKQQTETQQKINTDLQQQ
                     VDNLKNALSQMQTAMSECYTNYQSTSAIQNSSLKGNDAAQLQQNMPNPFDQSTIIRFY
                     IPSSAVNALIVLTDASGKLVKQFSNLPHGNGTVTIDAGSLSSGTFMYTLFVDGKTIAT
                     KQMVLTK"
     gene            complement(9127..9966)
                     /locus_tag="VEV83_10190"
     CDS             complement(9127..9966)
                     /locus_tag="VEV83_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HYK45527.1"
                     /translation="MQWRGRRESGNIEDRRGITGGHVAFGGIGGMIIAAIVYFLGGNP
                     SDVVQPQQDRTSTNSYSDNANDTLKDYIGVVLADTEDVWDSLFNSMHQQYVKPTLVLF
                     SGETDAGCGYASSATGPFYCPSDQKVYIDLSFANELTSRFGASNGDFAMAYVLAHEVG
                     HHVQNLLGITEKMDRMRSQVSESEYNKLSVKLELQADFLAGVWAHYNQQMKHVLDAGD
                     IDEALSAANAVGDDRLQKEMQGRVVPDSFTHGTSEQRMYWFKKGYSTGDLNQGDTFGD
                     GSL"
     gene            10205..11374
                     /locus_tag="VEV83_10195"
     CDS             10205..11374
                     /locus_tag="VEV83_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK45528.1"
                     /translation="MAKNSGSILIIDDERSIRKTLNEILSYEGFKVEEASDGDEGLKM
                     FSEKNYDVVLCDIKMPRTDGIEFLVKAGEYNPDIPVIMISGHGTIETAVDAVKKGAYD
                     YVAKPPDLNRLLITIRNALDRNSLSRETKVLKKKINRVQEMIGESDAMKKIKETIEKV
                     APTDARVLITGENGVGKELVARWLHTKSKRAEQSMVEVNCAAIPSELIESELFGHEKG
                     SFTSAIKQRIGKIELANGGTLFLDEVGDMSLSAQAKVLRALQEGKITRVGGDREINVD
                     VRVIAATNKNLLKEVDEKTFRLDLYHRLNVILIHVPSLNERKEDIPLLIDRFLEDIAE
                     DYGQAKKSIDKKAVEALQRHSWTGNIRELRNVVERLVILSGKTITESDVTSYVLI"
     gene            11378..12301
                     /gene="miaA"
                     /locus_tag="VEV83_10200"
     CDS             11378..12301
                     /gene="miaA"
                     /locus_tag="VEV83_10200"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HYK45529.1"
                     /translation="MQKTKTVIIIVGPTASGKTELSLELAAHFNTDIISADSRQCYRE
                     LNIGVAKPAPEALQSIKHYFIDSHSIHDDVNAQSFEDYALNAASEIFKKKDTAIMVGG
                     TGLYIKAFCEGLDDIPAVDVAVRRSIVDSYNKNGLNWLQNEVREKDPAFFLLGEHKNP
                     QRLMRALEVMISAGRSISSFRTSQKKARPFRTIKLGIHLSKEKLVSNIDGRVDAMIAA
                     GLVNEVRMMVPYRNLNALQTVGYNEVFSFLDGEISLEQAINRIRSNTRQYAKRQLTWF
                     KKDQSIIWIDCTSLTKRDTVAAAVMAVSNSG"
     gene            12453..15710
                     /locus_tag="VEV83_10205"
     CDS             12453..15710
                     /locus_tag="VEV83_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45530.1"
                     /translation="MRQKIDCVSMRFCAVLVLLFCCTGLFAQKTVTGKVTNAKDNSPI
                     GFATVTVKGTTVATLTNADGTFSITMPGGRSTLVVSSVGFDDVEISGESGTVAVSLKE
                     KTSSLDEIVVTGYTAQKKKEITGAVSVVNVKDMKQLPVGTGEEALQGRASGLTIISSG
                     QPGGASDIRIRGVTTFGNNQPLILVDGIRGELHDINTQDIESIQVLKDAAAAIYGVAG
                     ANGVIIVTTRKGSGKPKVSFDAYYGVTTPGPGYDMANTQEEANAKWQQNLNSGVNPGD
                     ADWGSKQYGTGNNPAIPDYIQTLTWMNADSDLVNYGYTLCNCPRDSVVDPKYYDINSA
                     QITRANKEGTNWYDVITRSAPTQSYNISVSSGSDKSSYYFSANYLNQQGIADFQYLKR
                     YSLRANTQFNIKNVIRIGENAYLYYKQNPRYGNQGEGSPFSVAFREDAIIPVYDIMGN
                     FGGTKSQDLGNSSNPYADIYRTKDNHTQDWVLQGNVYAEVDLLKHFTARTSFGGLTDN
                     NYYYNFNFVPYENAEGNTGSNSFTEGASTTTSWTFTNTLSYANVFGNDHSLRLLVGTE
                     AVDNYYRYESGTRSTYFSEDPDYWTLNSGTGAQSNAGGAGETTIWSYIGKLEYGYRGK
                     YLVNASLRRDGTSVFAPDQRFGWFPGVSAAWRISQENFFKGVTFIDDLKLRYSWGKLG
                     TFGDVAATNPYDLYATRLGKSAYDIFGNSTTPYAGFYKSNVGNPPTTWEGDIISNVGI
                     DATILKKKLDFTVEWYKKKVQKLLYPAQGVEWDRIFTGDADLPYINIATNQSTGIDAN
                     VTYHGTAGKDFRFDITGIFTSYKNKILEIPGSGYFNGPTVRNVVIQRNEVGHPYGAFY
                     GYQVIGLFQSQEDVDKSPTQTDAEPGVFKYRDVNGDNVINDADKTYIGDPNPDFTYGL
                     NLSASYKGFDFSAFFFGSQGNDIFNQTLYFTDFPDFFKGGIRREVAVNSWTTENTGST
                     IPKMLNTGGFSTDAETNSYFISDGSYFRCKQIQIGYTIPSATLSRFGIDRLRIYAQAA
                     NIFTITGYNGLDPELTTPPDSNGNITTLRDRGTYGIDQGNYPHTPTYLFGVNLNF"
     gene            15729..>16711
                     /locus_tag="VEV83_10210"
     CDS             15729..>16711
                     /locus_tag="VEV83_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK45531.1"
                     /translation="MKKTNYKFLIASGLAVVVVGLVLAACSDKFLDKPPIGTLNPQIM
                     ANMAGVQGLLIGAYSLADGEGASGDGFASGQSNWTYGGVASDDAYKGSDASDVEVVAP
                     FENWVSVVPSNGAIPQKWSVCFAGAQRCNDVLRVMRAATDVSDVHASDTPAIAGQARF
                     LRAFYHMELQKVFGHIIYVDENVNPANTNVTNKDNDAHVWEMIEEDLNYAVANLPATW
                     GSDVGRANSWAAKAMLAKAYMFEHKLSAAYPLLQDIIQNGVTAKGEKYALVPNDYSNF
                     NPAQKNGPESVFAAQTSVQDGSSVDWGGDPNGNYGDILNFPYTGGPGACCG"
BASE COUNT         4929 a         3532 c         3902 g         4348 t
ORIGIN      
        1 taaaagattg tgtgtggggt aaaaaatggc tcgcggaaca ggactatatc gacagcaatg
       61 cgattggcat ttatggagga agctacggtg gttgcatggt gttgaacgcg ttgtgttttt
      121 atccggatga attcaaggct ggtgtggatc tttatggcgt tgcgaattgg ttacgcacgc
      181 tgcgcaacat tccgccgtat tgggaatcat tcaaaaaagc tttatacgat gaaatgggag
      241 atccaaatac ggccgacagc ataatgctca agaatacctc tgctttgtac aattaccaga
      301 aaataacgaa gcctttgatt gtcttccagg gcgcaaacga tgtacgcgta ttgaaagttg
      361 aaagcgatga gatcgtggaa ggcgtgaaga aaaatggcgt cccggttgaa tatgtaatat
      421 atccggacga aggccacgga ttcgtgaaaa aggaaaacct ggtcacgaca gataaaagag
      481 cacttgagtt ccttgaaaaa tatatgaagc caaagaccgc aggttaaaca acgaacaaat
      541 ggaatcatca agccatctgc cggaatttgc aggtggcttt ttatttattc tgataatttt
      601 gttaagcgag caattatgca agctggtttc aaatcatggt tatgattttg ttcagcgcgt
      661 tttggaaaag atcttctgct gccgatttgc tgaaatattt tttttcaact ccgctgcttt
      721 ttttttggat agacgttgcc cttgcgcaaa ataacttttc atttcgccac attacctcgg
      781 ccgatgggct caccagcaat aacgccggca aaataatcca ggatagtcgt ggctttctat
      841 ggatagggac gcaggatgga ttgaatatgt atgatgggca aacaatgaaa caatactacc
      901 tgagcgatta cgtcccggcg caggcgaaca gtaatacagt ttcaggcgtt gcggaagatg
      961 cagatcataa tattcttctt gctgcgaaag ccggtataat taaattttca tgggacacga
     1021 aacaattttc cgtcgcgtat aaaaattcat ttacgggatt tggcaacgta gctcctgatc
     1081 ttttcgtaga cgcggaaaaa aatatttggg tcaatgaacg tgttcgcata agaaaatttg
     1141 atccacattt tcacctgctt cacacctgga acctgcgtga cagtacgaac agcaaaaatc
     1201 ttaacgggcc atccgttacg ttcatatgcg gagaggacgt tgatcatgac gtttggttca
     1261 acgatagcag ctcaatcttc agaattgatg cgacgacaaa tttgatagac agttctgaaa
     1321 atcaaaaatt gaagaacatc aaccggcatt atgatcatgc ggaactgctg tgcttttcgc
     1381 atggttcggt ttggatgata gaaagcgaac acatccttgt tcacctcact tcatcatttc
     1441 agtttatcgg ctcgtttgaa ctctcaaaac aaatcatacc gttttacagc ggtgtcattg
     1501 aacaaaatga aaaagtgtgg attgcaacgc acttcaatgg tgttttcgaa ttagacatcc
     1561 gtaccggcca cagtcagcat tatggagaaa acaattctct ctcttccgac aacgtttcca
     1621 atattacaaa ggacctatac ggaaatattt ggatcagcac attcgggggc gtcgacgagt
     1681 tgctcgccaa tagctcattt tttaagcaat tgacttttga cattcctact gattcaattg
     1741 ctcaaaaatc gatcattcat caaactttct ttaagcacaa cgctttgttc acatttatgt
     1801 caaacgggat aatgcgtacg aagttggaaa cgaatgagtc tacttatttt tttgatccgg
     1861 gcaaaaaaaa ttgggaaggt gtttactatt cgtcagctgc tccttttgca gacaaatggc
     1921 tcgtttcccg gcaccgcgat gtggagatcc tcgcgtttaa aaataacagg cttttctttt
     1981 caactccttc catgccccat ccttcggaac ttgattcgtc gggtgttgtt tctttttatg
     2041 aagaccacga aaaaaatatc tggatgggat tagtgaatga gcgaggcatt gtttgctggc
     2101 gcaccagcaa caacagcttt tccgtctata gccaaaggga cacaggaaaa aattattgcc
     2161 ctctaaggca tcttagctat gctgcagaag atgctaaagg aaatatttgg atgggttatg
     2221 acaaaggcgg ccttgccatg tttgataaaa tgcagaacag gtttgtgccg attccgtctt
     2281 cgcacggaaa ttctatttca aacgccgctg tttccggcat cacaagcgac gggcaaaatt
     2341 tatggatctc aacaagtgcg ggcctttttc aatacaacga accgggtaat tcttacaggg
     2401 tattcacgcg caaagagggt ttgccttcta atttcgttaa aagcatcatc gctgatgatg
     2461 caggtcatgt ttggatggga tttgaagggg cacttgcaga attgaatgtt tcgtcgaagg
     2521 cgatcaccac atataatact gtcgatggtt tgcccggtga agatttggaa aatccgtttt
     2581 atgatccagc gtctgaaaca atgtttttct gcaccgaccg ccgggtgata tactttaatc
     2641 cgcgtcaggc aatcaaggtt attcccccca ttaacccggt ggtgacttca ttgcaggtaa
     2701 tgggcagaga ggagccggtc agcctaaaca aaaaattagc aataccttat tcccgtaact
     2761 atctctcctt cgcattttct gctcctaatt ttctcaacgg ttcagaaact gaatatgcct
     2821 gcaagctgga aggtgctgat aagagctgga gttatttagg gaatcatcac tttgcgagtt
     2881 atagccagct gcaaccaggc gattatgttt tcaaaataaa ggcacgtgta aaaggtggca
     2941 actggcagga aacgaccacg cctcttgaga tcagcatcct tgctcctttt tggcgaaccg
     3001 catggttttg gatcgcatgc attgttctgt ttttgtctct cgttttttcg tttatttacc
     3061 tcaggctacg cagcaatttt gaaaagcgta ttttatctca atcgatccgc gacaaaattg
     3121 ccggcgatct tcatgatgat atcggcagca cgctcagcag tatttcaatt ctcagtgagc
     3181 ttgcaaaaca agatacgtcg cgggtggcag cttacctgga aagcatcagc aggaacactt
     3241 cattgatgca ggagaatatg agtgatatcg tctgggcgat caatccaaag aacgaccggt
     3301 ttgtaaatat cattcagcac atgtcgcaat ttgctgcaga agtactcgaa tcgaaaaaca
     3361 tagaggtaaa tttcaacagc gatgaatcgc tttcatcccg gatgctgccg atggagaaga
     3421 gaaaggattt ttatttattt tttaaggagg cgataaataa ctgcgcgaaa tatagcggcg
     3481 ccgatcgtgt tgagattttg atatcctgca gccagcaaaa aataagtttg caaattgccg
     3541 acgatggaaa aggttttgat acaacgatag atcacaaggg caatggaatg tcaacaatgc
     3601 aaaaacgtgc agctgagctg gggggcaata tgaaacttgt ttccgctccc ggcaacggca
     3661 caacaatagt tcttgatttc ccggtttagc aggtggtaaa atcacgtgtt tatgtgattg
     3721 cccacctgcc catacttgat tttttttgtg aagaagatat gtcagcagaa ccttcatcaa
     3781 atgaaataaa tgtggcagtg tttgaagata acgatcagct gcgcgaaagc ttaagccagc
     3841 ttatcgataa cgccggtggt ttgcattgta ccggcgcgtt tgctgatgct aaccagctgg
     3901 aacgaaaaat tacaaagtcg aaaccggatg taattatcat ggatattgat ctcccgggaa
     3961 tgaacggcat tgatgccgtt agcgcgattc atgaaaaact tccgtcggta cgcgtcctga
     4021 tgcaaactgt gttcgatgac aacgataaga tttttgcagc catacgtgcg ggcgcttccg
     4081 gctatatttt aaaaaaggcc gcgccggcga agatcattga agccattcgc gagacgtata
     4141 acggcggggc gccgatgacg ccttccatcg cggaaaaagt tttaaagatg tttcgtattc
     4201 aaacgcagga aacaaacgcg gaaaagatcg acctgtcaga cagagaaaaa gaaatcctgt
     4261 ctttgcttgt aaagggcagg agctacaaga tgatcgccgc cgattgtttc atttccattg
     4321 ataccgtaaa ctcccacatc aaaaatatct atgaaaaact gcatgtgcat tcgaagagcg
     4381 aggcggtggt gaaggcgatc aatcagaggc ttatttaaga gaagaagatg acggttgaca
     4441 gttgagagaa gttctatgtt tgaggttaag cttattgttc gaggtttgat tttgatcttt
     4501 taccttttac gttttacgtc tcactcatta ttcattactc atcattcatc tgaaaaatca
     4561 cgtgtttatg tgattgacaa ccgcgttcag ccgaagtagt ttcgggtaaa attctttatg
     4621 aaaaacgcac agctactttg cctggttatc ttgttttctg ttttcgcgac gatttccttt
     4681 gcacaaaata cattcccgtc taccggcgca gcggggattg gaaccacaac tcccgatgtg
     4741 tcgtcattgc ttgaaataaa atcaacgtcg cgaggattac tcatcccgcg catgacgcaa
     4801 acgcagcgca acgcgattgg atctccggca gccggattga tggtctatca aacaaacaac
     4861 actcctggtt tttattatta tgacggaggt aaatggaccg ctgtttctcc caagggtgta
     4921 aacaaaagtt tatccaattt aaccgcaccg acagggctca atgttgacct gttgcctgga
     4981 gcagacagtt caattaattt gggcagtagc agtttgaatt accgtaatat ttttttcaag
     5041 ggcaaacttt atcaaggctc gattccgatc atgtataatg atacgatgaa cacttttgta
     5101 ggtcaaaatg cgggttcaaa ttcaagctat tttagtactg ccgttggcag cggtgcgttg
     5161 tccaacacca ctaatgcgcg caatgcagcg ttaggctacc aggccctcca tagtaatact
     5221 tcaggaaaca aaaatgttgc aattggttct ttcgcactta caagtaacac cggcggttct
     5281 tataacactg cgattgggga tgctgcgttg tactctaaca taggcggata ttataataca
     5341 gctacaggct ggcaagccct cgcctttaat acaaccggct cttctaatac tgcaaacggg
     5401 tattctgctc ttggaaacaa cacaacaggt gaagataata cggccattgg cataaatgct
     5461 cttttactcg atacaaccgg aaaatacaat acagccaccg gggccgcagc acttgaattt
     5521 aaccgatcag gaaatgagaa tacggccgat ggcgattttg ctctttttct aaacaccaca
     5581 ggcttcagca atgtggccgt cggcaccaat gctcttcatt caaatcaaac tgcatcgaat
     5641 ttggtagcag tgggtgattc ggctttgtat aattcaacag ccgcatctta taatactgct
     5701 gtaggatcaa aagcggggta cactacacaa aacagcacca acagttattt tggatggcgt
     5761 gccgggtatt atgataatgc gccgagcaat gtagccattg gctaccaggc tggctggctt
     5821 gtagcaaacg gcagcggatc cacgaacgta ggataccagg caggacctgc tttttcgggt
     5881 tataccaata caacaggcat cgggtttaat gtaacaccta ccgcttccaa ccaggtgtgg
     5941 atcgggaata cggctgttac ttctatcggc gggcaagtgg gatggaccac ttttagtgat
     6001 ggtcgtttca agaaaaatat taagcaaaat gttcccgggc tcgcattcat aaatcaattg
     6061 aaacctgtaa catacacact tgatctttcg aatttgaaga aaagcaaggg ggaagacaaa
     6121 aaagaaatcg ccggtaattc aaaaaattta cctgataatt ctttccagga aaacaaggta
     6181 cacacgggtt ttattgcgca ggatgtggaa gcagtcgcaa aaaaaatgaa ttacgatttt
     6241 gacggcgttg atgcgccaaa aaatgataag gatttttatg gattgcgtta cagcgaattt
     6301 gttgtgccat tggtgaaagc ggtgcaggag ctttcaaaac aaaacgattc tcttaaacaa
     6361 aataaccagg cgctcagcga taaattgaat gcgctgtcaa acaaaatcag tctcatcgag
     6421 aatgcgatga gccagtgctg cagcagcttt tcttcggcga tgcaggcgga cgccgacaac
     6481 gaaccgtttt caaaaatttc tgatcagcct gcgcttgaac aaaacgttcc gaatcctttt
     6541 aatcgctccg cctatataaa atattacatc ccctccgggg caaaaaacgc agcgatcgtt
     6601 gtgagtgatg tgaacggaaa gcaggttaaa caattcagcg cactatcgaa tgggaacgga
     6661 agcataacaa ttgaaggcgg ttcattatca tcaggcacgt atatgtacac actcgtaatt
     6721 gatgggaaaa gcactgcaac gaagcaaatg attctgacaa aatgaaaaga gacaaattcg
     6781 aatcatttga atacggaata tcgcaatgga tcaaatggat acacgagctt ttttttattt
     6841 aaaaatatca gtcatgaaaa ccactacact tattcttagc agccttttgt ttcttcagtt
     6901 cgccggccgc gcacaaaaca catttccttc aaacggcgca gttggcattg gcaccacgac
     6961 gcccgatgct tcatcgttgc ttgaaataaa gtcgactgta aaaggcttat tgatcccgcg
     7021 gatgacgcaa acgcagcgca acgcgattgc gacgcccgca accggtttat taatttatca
     7081 gtcggatcat acttccggat tttattacta cagcggaagc gcatggacag ccgttacaca
     7141 aaagagcaaa gggtggtcgc tgacaggtaa cagcggtact aacccttcaa cgaattttat
     7201 aggtacgaca gatgcgcagc cattcctgat aaaagtgaac aatcaattat ccgcctacct
     7261 cgattacaat tcaagcaaca gtacaggttt cggttaccag gtcctgggaa cgaacagcgc
     7321 cgcagcaggg aatcaggcat ttggatacca ggcgcttcat tcgaacaccg gcggctatca
     7381 aaatactgcc atcggcggcg gtgccatgta ttcaaatact accggaggtt ataatgttgc
     7441 agtcggagtg agtgccttat ccgcaaacaa cggtttttca aatacggccg ttggccaacg
     7501 tgctatgtac acaaataccg gtggcggaaa taatactgca attggattta attcgcttta
     7561 ttcaaataca acagggaatt ataacgttgc taacggagac cacgcaggct ctgataacac
     7621 agcaggaagt aacaatattt ttatcggtaa gaatgctgga ataggaagcc aaacaggaaa
     7681 cggtaatatt tgcgttggac aaggaagcac tgtttccaac ggcattagta attcgatagt
     7741 gattggtaac tctttatcta cagccagtaa caatgctgtc atacttggcg gcaccgcgca
     7801 gaacgttgga atcggaacta catcaccaac ttcaatttcc caattaacgg taaatggggg
     7861 tagtaaatat tattcgatat acgcagagaa tcattacacc ggttcaggcg gaggcatcac
     7921 aataaacgca acaacagata agggtggtgg ttggggcgtt tacggggaat caaccggggc
     7981 tacttcttca gatataaaca ttggtgtgta tggttatgca aatggttcaa cataccaggt
     8041 tgcacctccg ggctctgtct tcaccttcaa cgcgaattat ggtgtacttg gcgatggtgg
     8101 ccaaaatggt atagcaggtg atttcaatgg tagcattgcc gtatatggcg gcgtgtattc
     8161 ttcttcagat gcaaaactga aaaagaatat taaacaacta aatgatgtgc taacacgaat
     8221 aaagctattg ccggttaaag aattcgattt tgaccaggat gtggcaaaac aaaataaatt
     8281 aaaccttcca ctatcgcatc aatttggatt tcttgcccag gatgtacaaa aagtttttcc
     8341 aaacctggtg gcaggcatca cagccctaaa aattgatgac accagaaaaa acgaacccaa
     8401 acttaaggga acaactggat tcctcgcggt aaactacatt agctttattc cattgctcac
     8461 aaaagctgtg caggagttgt catcacagaa cgaatcgctc aaacaacaaa cggaaacgca
     8521 acaaaaaata aatactgatt tacagcaaca ggtcgataat ctgaaaaacg cgctttcgca
     8581 aatgcaaact gccatgagcg aatgctatac caattatcaa tccacatcgg caattcaaaa
     8641 ttcaagtttg aaaggaaatg atgcggcgca attgcagcaa aacatgccaa atcctttcga
     8701 tcaatcgacc atcattcggt tttacattcc atcttctgcg gtgaatgcat tgatcgtatt
     8761 aacggatgct tcaggaaaac tggtaaagca attcagcaac ttacctcacg gcaatggaac
     8821 tgtaacaatt gatgcaggtt cattgtcatc aggcactttc atgtacacac tttttgttga
     8881 cggcaaaacg atcgcaacaa aacaaatggt tttgacaaaa taaaaaacaa gtaaacacaa
     8941 aaacctgtcg ggcgccaggc agggatcccg ctaagccatt gcgggtagaa ttcgggatgg
     9001 agcgatgacc tgtaccaaag aagtattcaa aaaaattttt catggacgga gagattgtca
     9061 aggctaaaca atgcttaaga ccacgtgaat gcttgctggc ttacctgcaa cctgcacctg
     9121 catacgtcac aaacttccat caccaaacgt atcaccctgg ttcagatcgc cggttgaata
     9181 acctttttta aaccagtaca tgcgttgttc gctagtgcca tgagtaaaag agtcgggcac
     9241 aacacgcccc tgcatttctt tttgcaggcg atcgtcgccc acggcattcg ccgcacttaa
     9301 cgcttcatca atatcaccag cgtcgagcac atgcttcatc tgctgattgt aatgggccca
     9361 aacgcctgca agaaaatctg cctgcaattc gagtttaacg cttagtttat tgtattctga
     9421 ctcacttacc tgggagcgca ttctgtccat cttttctgta atgcccagca aattttgaac
     9481 gtgatgtccc acttcatgcg caagtacata tgccatcgca aaatcgccgt tggatgcacc
     9541 aaagcgactc gtaagttcat tggcaaaaga gagatctata tacacctttt ggtctgaggg
     9601 gcaataaaat ggtcctgttg cagaacttgc gtagccgcaa ccggcatccg tttcgccgga
     9661 aaacagcacc agcgtaggtt taacatattg ctgatgcatg ctgttgaaaa gggaatccca
     9721 aacatcttcc gtgtcggcca aaacaacgcc gatgtagtct ttcagcgtat cgtttgcatt
     9781 gtccgaataa ctgtttgtgg aagttctgtc ctgttgtggt tgtacaacat cgcttggatt
     9841 acctcccaaa aaataaacaa ttgcggcgat gatcattccg ccgatgccgc caaaggcaac
     9901 atgaccgccg gtgataccgc gtcggtcttc tatatttccg ctttcccggc ggcctctcca
     9961 ttgcataatg taaaaattta agcgttgtat cggtcacact cttcaaaagc gtcacaccgt
    10021 tctcacttac agaacaaatt tatctccaaa ttttacaaac acgatttcaa gagcacgttt
    10081 gtgctgggct ttcgtcaaat tcatgtttga aacagcttac tttatctgag atcaggcttt
    10141 ttgaaaatat gtgtaaaggg ctatgcgctg atgtttgtta tttttgccgc ttaaacgatt
    10201 gttaatggca aaaaattcgg gaagtatttt gatcattgat gatgaacgtt cgatccgtaa
    10261 gacgttgaat gagatccttt cttatgaagg ctttaaagtg gaagaggcca gcgatggcga
    10321 cgaaggtttg aaaatgttct ctgaaaaaaa ttatgatgtc gtcttgtgtg atatcaaaat
    10381 gcccaggaca gatggaatag aatttttggt gaaagctggc gaatacaatc ccgatatccc
    10441 cgtcatcatg ataagcgggc atggcaccat tgagactgct gttgatgcag taaaaaaagg
    10501 tgcttacgat tatgtggcca agccgccgga cctgaatcgt ttgctcatca ccatccgcaa
    10561 tgcgcttgat agaaattcgc tgagcaggga aacaaaagtc ctgaagaaaa agatcaatcg
    10621 agtgcaggaa atgatcggtg agagtgatgc catgaagaaa ataaaagaga ccattgaaaa
    10681 agtagcgccg acagatgccc gcgttttaat aaccggcgaa aatggggtgg gaaaggaact
    10741 ggttgcacga tggttgcaca caaaaagtaa gcgggcagaa caaagcatgg tggaagtgaa
    10801 ctgcgcagcg ataccgtctg aattaataga aagcgaatta tttggccatg agaaaggctc
    10861 gtttacatcg gcaataaaac agcgcatcgg aaaaatcgag cttgcaaacg gcggaacgct
    10921 tttcctcgat gaggtcggcg atatgagcct gagcgcgcag gcgaaagttt tacgggcact
    10981 gcaggaggga aaaataacgc gcgtcggcgg tgacagggaa attaatgtgg acgtaagagt
    11041 gatcgcggcg accaacaaaa atttgctgaa agaagtggat gagaagactt tccggcttga
    11101 cctttatcat cgtttaaatg ttatacttat tcatgtgcca tcgttgaatg aacggaagga
    11161 agacattccg ctgctcatcg atagattcct ggaagatatt gcggaagatt acggccaggc
    11221 gaaaaaaagc atcgacaaaa aagcagtgga ggctttacag cgtcacagtt ggaccggcaa
    11281 tattcgcgag ttgcgtaatg tggtggagag actcgttatt ctttcaggca aaaccattac
    11341 agagagcgac gtaaccagtt atgttttgat ataagcagtg caaaaaacga aaaccgttat
    11401 tattatagtt ggccccactg catcgggcaa aacggaactt tcactggagc ttgctgctca
    11461 ctttaataca gatataatct ctgccgattc gagacaatgc taccgggagt taaatatcgg
    11521 cgttgctaaa cctgcacccg aggcgcttca gtctatcaaa cactacttta tcgattcaca
    11581 ttctatacac gacgatgtga atgcacaatc ctttgaggat tatgccctga atgctgcttc
    11641 cgagatattc aaaaaaaaag acaccgcgat aatggttggc ggaacgggtc tgtacataaa
    11701 agcattttgc gagggacttg acgacatccc ggcggtagat gtcgcagttc gccgcagcat
    11761 cgtcgactcg tacaacaaaa atggattaaa ctggttacaa aacgaggtgc gggaaaaaga
    11821 tccggcgttt tttctgttgg gcgagcacaa aaatccgcag cggttgatgc gcgctcttga
    11881 agtgatgatt tcagccgggc gttccattag ttcctttaga acgagccaaa aaaaagcgcg
    11941 gccattccgc acgatcaagc tgggcataca tttgtccaaa gaaaagttgg tttcaaacat
    12001 cgatggccgg gttgacgcga tgatcgcagc cggtttggtt aatgaggtgc gcatgatggt
    12061 accatatcgc aatctgaatg cgctccaaac ggtcggttac aatgaagtct tcagcttttt
    12121 ggacggcgaa atatcgttag agcaggcgat aaaccgtatc cgatctaaca cccggcaata
    12181 tgcaaaaagg cagctcacct ggttcaaaaa agaccaatca ataatttgga ttgattgcac
    12241 ttctttaaca aaaagagaca cggttgccgc tgctgttatg gctgtctcta attcaggcta
    12301 acaattgtaa gcattgatac tgaaaacaat acgaccaaat gtgtaaaaaa aacacattaa
    12361 atttttttta catttttttg tagttctgtg caatgaattg ttaatttcgg ctgtccttat
    12421 ttattattta taacctcttt ttaaaaattc ttatgagaca aaaaatcgat tgcgtgagca
    12481 tgcgtttttg cgctgtgctt gttctattgt tttgttgcac aggattgttt gctcaaaaaa
    12541 cagtcaccgg aaaagtgacg aatgccaaag acaattcgcc tattggattt gcaaccgtga
    12601 ctgtgaaagg cacaaccgtg gccacactta caaatgccga cggtactttt agcatcacaa
    12661 tgccgggcgg cagatccaca ttagtagttt cttcggtcgg ctttgatgat gtggaaattt
    12721 ctggtgaatc aggcaccgtt gcagtatcgc tgaaagaaaa aacatcgtcg cttgacgaaa
    12781 ttgtggtgac agggtataca gcccaaaaga aaaaggaaat taccggtgcc gtatctgtgg
    12841 taaatgtgaa ggacatgaaa cagctgccag ttggaacggg tgaggaagct ttacagggac
    12901 gcgcatccgg ccttaccatc attagctccg gacagcccgg cggagcaagc gatatccgca
    12961 tccgcggtgt gacgacgttt ggtaataacc agccactgat cctggtggat ggaatccgtg
    13021 gcgaactcca tgatattaat acacaagata tcgaatcgat ccaggtattg aaggatgcag
    13081 cagctgctat ttatggtgtg gctggtgcaa acggagttat catagttact accaggaaag
    13141 gatcaggcaa gccgaaggtt agctttgatg cgtattatgg tgtaacaact ccgggtcccg
    13201 gctatgatat ggcgaacacc caggaggaag caaatgcgaa atggcaacaa aatttgaaca
    13261 gtggagtaaa tccaggcgat gcggactggg gcagtaaaca gtatggaact gggaataatc
    13321 cggcgatacc cgattatatc cagacgctta catggatgaa tgcggatagt gatttggtaa
    13381 attacggata cacgctctgt aattgtccgc gcgattccgt tgttgacccg aaatactatg
    13441 atatcaattc tgcccagata accagggcaa ataaagaagg gacaaactgg tatgatgtca
    13501 ttacaaggag tgcgccgacg caaagctata acatctcggt aagctccgga tcggacaaaa
    13561 gctcgtacta tttctccgcg aactatctta accagcaggg aattgcagat ttccagtatc
    13621 taaagagata ctctctccgg gctaacacgc agttcaatat aaagaacgtc atacgcatcg
    13681 gtgaaaatgc ttacctgtac tacaagcaaa atccaaggta cggcaaccag ggtgaaggaa
    13741 gccccttcag tgttgctttt cgtgaagatg caatcattcc ggtatatgat ataatgggaa
    13801 attttggagg tacgaaatcg caggatcttg gtaactcgag caatccatat gctgatattt
    13861 atcgtaccaa agacaatcat acacaggact gggttctcca gggaaatgtg tatgctgaag
    13921 ttgatttgtt aaagcacttc acggcgcgta cgagctttgg tgggctaaca gataacaact
    13981 actactacaa ttttaatttt gttccttacg aaaacgcaga aggaaataca ggttctaact
    14041 cctttacaga aggcgcttca actactacca gttggacgtt tacaaataca ttgagctacg
    14101 caaacgtatt cggaaacgac cacagtctaa gattactggt aggtacggaa gcggttgaca
    14161 actattaccg gtacgaatca ggtacacgta gtacctactt ctcagaagat ccggattatt
    14221 ggaccctcaa tagcggtact ggtgcgcaat cgaatgcagg tggtgccggt gagacaacga
    14281 tctggtctta tatcggcaaa ttagaatacg gataccgcgg gaagtacctt gttaatgcta
    14341 gtttgcggag agacggaacg tcagtatttg cgccggacca aaggttcgga tggttcccgg
    14401 gagtttccgc ggcctggcgg atatcgcagg aaaatttctt caaaggtgta acattcatcg
    14461 atgatctgaa attgaggtac agctggggta aactcggtac attcggcgac gtcgctgcga
    14521 ctaatccgta tgatctttat gcaacaaggc tgggtaaatc agcttacgat atcttcggaa
    14581 acagcacgac accatatgca ggattttata agagtaacgt tggtaatcca ccaacgacat
    14641 gggagggaga tattatttct aatgttggta tagacgcaac catccttaag aaaaagctcg
    14701 atttcactgt tgaatggtat aaaaagaaag ttcaaaagct gttgtatccg gcccagggcg
    14761 ttgaatggga caggatattc acgggcgatg cagatctgcc gtatataaat attgccacca
    14821 accaaagcac aggcattgat gccaacgtca catatcacgg aacggcagga aaagacttta
    14881 ggtttgacat aaccggcata tttacctcgt ataaaaacaa gatacttgaa ataccgggtt
    14941 caggatactt taacgggccg actgtcagaa atgtcgtgat tcagcgtaat gaggtagggc
    15001 atccatacgg tgcgttctac ggataccagg tgatcgggtt gttccagagc caggaggatg
    15061 ttgacaaatc cccgacacaa acggacgctg agccgggagt gtttaaatac agggatgtga
    15121 atggagataa tgttataaat gacgctgaca aaacctacat cggtgatcca aatccggact
    15181 tcacttatgg tctgaatctg tcggcaagct ataagggatt tgatttctcc gcgttcttct
    15241 tcggttcgca aggcaatgac atcttcaatc aaaccttgta cttcacagat tttccagatt
    15301 tcttcaaagg tggtataaga agggaagttg cagtgaattc atggacaact gagaacacag
    15361 gttcaacgat accaaaaatg cttaacacag gtggtttcag cactgatgca gaaactaaca
    15421 gttattttat cagcgacggc tcttattttc gctgcaaaca gatacagatc ggatacacca
    15481 tcccgtcagc aacgctttca agatttggaa tagaccggct ccgtatttat gcgcaggctg
    15541 caaacatatt tacaataacc ggttataatg gattagatcc tgagttgacc acgcctccgg
    15601 attccaacgg aaatattact acgctgcgcg atagaggcac ttatggcatc gatcagggta
    15661 attatccaca tactccaacg tatctttttg gcgttaatct taatttttaa tttgtaacaa
    15721 atcagaatat gaaaaagacg aattataaat tcttaattgc ttccgggctt gcggtggttg
    15781 tcgtcggcct cgtgcttgct gcgtgtagtg acaagttttt ggacaagccg ccgatcggca
    15841 ctttgaatcc gcagatcatg gcaaacatgg caggggtgca gggcttattg attggcgcat
    15901 attctttggc tgatggagag ggtgcgtccg gcgatgggtt tgcgtccggt cagtcaaact
    15961 ggacgtatgg cggggtagcg agcgacgacg cctataaagg ttcggacgca agcgacgtgg
    16021 aagtggtggc cccatttgaa aactgggtat cggtagtgcc atcaaacggc gctatccctc
    16081 aaaagtggag cgtttgtttc gcgggtgcac aacgctgcaa cgacgttttg agagtaatgc
    16141 gtgctgctac agatgtctcg gacgtacatg catcagatac tccggcaatc gcaggtcagg
    16201 ctcgttttct gcgcgctttt tatcacatgg aattgcagaa ggtattcggc cacataatct
    16261 acgttgatga gaacgtaaat ccggcaaata ccaatgtaac caataaggat aacgacgctc
    16321 atgtgtggga aatgatcgaa gaggatttga actacgccgt tgcaaatttg cccgctacct
    16381 ggggcagcga tgtgggaaga gcaaatagct gggcagcgaa ggcgatgttg gcgaaagcat
    16441 acatgttcga acacaaactg tcagctgctt atcctttact gcaggacata attcagaacg
    16501 gcgtgacagc gaaaggagaa aaatacgcat tagtgcccaa cgattactca aactttaacc
    16561 ctgcgcagaa aaatggtccg gaatcagttt tcgctgcaca aacttctgtt caggacggtt
    16621 cttctgtaga ctggggtggt gatccaaatg gtaactatgg cgatatcctg aacttccctt
    16681 acacgggtgg tcccggcgct tgttgcggtt t
//
LOCUS       DASQJI010000365        10592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1576827,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000365 DASQJI010000000
VERSION     DASQJI010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10592
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576827"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            29..769
                     /locus_tag="VEV83_10215"
     CDS             29..769
                     /locus_tag="VEV83_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45532.1"
                     /translation="MSKLLTHIGRYLLMIRGMFTRPENFRMYWKEFMHQSAEIGIGSL
                     PIVVIISVFLGAVTTVQTAYQLVSPLIPKATISQVVRDTIVLELSPTLVCIVLAGVVG
                     SKIASELGNMRVSEQIDALEIMGINTRNYLILPKIAGAFLVIPALIVISIGLAIWGGR
                     MAGSLSGILSTETFDIGLRLELNLHNIAFAMYKAYTFSFIISSVSAYFGYYVKGGSFE
                     IGRASTTAVIVSCILILMADYILASLLL"
     gene            complement(784..1437)
                     /gene="msrA"
                     /locus_tag="VEV83_10220"
     CDS             complement(784..1437)
                     /gene="msrA"
                     /locus_tag="VEV83_10220"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HYK45533.1"
                     /translation="MKLSSLFLFTITTLVACAQSKQPASSAEHLSPSQYKNYTVATFA
                     AGCFWHEEALFESVKGVKEAVSGYAGGTAANPSYEMVETGNTGHAESVNVYYDPKIVT
                     YETLVKVFFAGQDPTQVNGQGPDHGTQYRSIAFYRSDAEKQIIEKEMKELSASGKYSK
                     PLATQVVPFTKFWEAEAYHQNYIEHNPNSGYVQYVSIPEIKEFQKQYPQLVKPDHIF"
     gene            complement(1711..2319)
                     /locus_tag="VEV83_10225"
     CDS             complement(1711..2319)
                     /locus_tag="VEV83_10225"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HYK45534.1"
                     /translation="MFTGIIEATGIIHSIEPNENNLRFWISSAISNELRVDQSVSHDG
                     VCLTVDEIANNMHRVTAIEETLSKTNLGECKNGDLVNLERCMQMNGRLDGHLVQGHVD
                     TTATCIDVEQKNGSWEYRFQIPAEFMHLIIEKGSICLNGISLTAFDIKFNSFKVAIIP
                     YTFDHTNIRNTQNGSTVNVEFDVIGKYLARFREVFLSAGGKK"
     gene            complement(2350..4860)
                     /locus_tag="VEV83_10230"
     CDS             complement(2350..4860)
                     /locus_tag="VEV83_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HYK45535.1"
                     /translation="MKKDAAKKTAKKKAKVSGIKKSVRILWKVFFITIGVGVLVIVAA
                     DLGWLGSMPSIEELQNPSASLASQVYADDGTLMGKYYLQDRVNVKYSDISKYVIEALV
                     ATEDERFYDHNGIDPRSLARAIFLLGSQGGGSTITMQAAKNLFTNYSSNIFVRLPQKI
                     KEGIIAIKLERNFTKEEILTIYLNTVPFSDNVYGIRNASKTFFQKEPDRLTVEEAAVL
                     IGMVNAPTAYNPRLYPARAKERRDFVINKMVSSNYLSEGQAAALTKMPIALNYRKLNE
                     NAGLAPYFRMVLGEEMKKWCKSHTKAGGDNYNLYKDGLKIYTTINPKMQLYAEEAVAK
                     HMSYMQKILNSQSNIKTGSVWKDHENVLEAAMKASDRWKNMKEDGLAEQEIRKSFFTS
                     TRMKVFAWNNNREKDTMMTPYDSIKYSRQMLQTGFMSMDPLTGHVKAWVGGIDFKNFK
                     FDHVNINTRRQVGSTIKPLLYSLAIEDAGFTPNTMVVDQQQSFGQYGMVPATGTSCTG
                     NTMPMSSALMWSRNCATAYIMKQLGGSKDNQGAQRFVEFLKNCNVQTSKIDPYPSIAL
                     GACEISLYEMIQAYSMFPGRGFNVKPMYITRIEDKNGNVLETYTPQRKEIISDVTAYF
                     VISMMEGVVRSGTGRRMWSYGVNGAIAGKTGTTNDNSDAWFIGYTPQLIGGVWSGCDD
                     RFIRFSSTTNGQGASAALPVWAYFYNKVEHDKTLPYSDTADFAKPDVGIDEPNYDYIN
                     HVQMDLGAQGDDVGNGQSSDYEQGYDNTNPQNIAPESNTEDLYNNEESPSGESKKPPA
                     NTNDNSKPPVNKNNTKPPIDSSQKPKAIMPKKDGDQKR"
     gene            complement(4869..7820)
                     /locus_tag="VEV83_10235"
     CDS             complement(4869..7820)
                     /locus_tag="VEV83_10235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45536.1"
                     /translation="MGNAGFVLLVLVGIILAAHVHAQPGTTVDLKKPSQYENRTLGSE
                     KTGDGKIGYGKKLYQNTVTHYNYFFNADNRLNDIIARAKEANKDDYTQLLPYYDYSLD
                     VTSVDQDLDSVIYKCNAGILLHDLRNDWIDDMYFLMGKAYYLRKNFDSAEHVFLYLNY
                     AFAPKDDGYDIPMGSNANGKVFTISTKEKKGISQTFSTPPRRNQNLIWVAKNYMAAGK
                     LGQASGILQILRSDPYFPERLQPELHEALGYLFYLEYVDDSAAFHLSKATNLDISRQQ
                     KARREFLTGQLYLASGVRDEAEKYFKYAAEHTIDPSMAVYASLNAVEASDDSSDASDR
                     KIAALMGLARKDRYVAYRDMIYYTAAQIEVDRKNYPAASADLQKSIKYNVNNPIQRSR
                     SFMLLGDLEYLKPDYKAAANNYDSVDVSSLAEADQHRLNDRLEALHTITTNLAVVHAE
                     DSLQTVAHMPADQRTALIKKTVRQLRKEQGLKEQDSTVFVNDAVMQNPNNTAAASDLF
                     ASSSKSDWYFNNDAMRQTGFSGFRSTWGNRANVDNWRRQDAVNKQIAQTSTNDNEQSD
                     DTAQSNAQNMLVTLQNPSDISYDGLLANVPLTEEQMQASNNRIADALFSNGQEFQNQL
                     EDYVAAIDAYETLNRRFPDNSHLEESLFGLYYCYNKIGKKFSADSARTALTTKFKDGK
                     FAAFINNPAAAFQTEKPEDAATKEYERIYNLFIEGNFDEAKTAKAHADSTYGNSYWTP
                     QLLYIESIYYVSKREDSTAIAALTNLTTQFANTPLAEKAQTMIDVLGRRKEIEAYLTN
                     LQITRLSEDEPSRVVTLDAVENIVEKKEIKKDSVVSSSVSKTANQHVDSLKTISGTVK
                     TYVFDPSAQQFVVIFLNKVDPVYANETRNAFNRYNQSNFYNQKINISSARLTDTMNVV
                     LLGPFSDAATAMLYVEKVKPQAPRMIIPWLKPEKYSFSIISQQNLDVLNDTKDLEGYQ
                     SLIEQVLPGKF"
     gene            7933..8325
                     /locus_tag="VEV83_10240"
     CDS             7933..8325
                     /locus_tag="VEV83_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45537.1"
                     /translation="MSKINPNTTLKRLQNRYRLVLMNDDTFEEVVKFRLSRWSVYIAF
                     STVFLLLVGFTVALLVLTPLKYYIPGYGKSENRTELQLLKMRTDSLQQALQYKEQYLQ
                     SIKKVLGGDVQPRDTSTLNVPKTEISHD"
     gene            8318..8545
                     /locus_tag="VEV83_10245"
     CDS             8318..8545
                     /locus_tag="VEV83_10245"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HYK45538.1"
                     /translation="MTEEKKNYSNKELLIKYSSLGVQLLAGLIVAVFAGKWLDKKIAL
                     SFPLCIWLFPLLVILGMIFNAVRDTSRKKNE"
     gene            8538..8945
                     /locus_tag="VEV83_10250"
     CDS             8538..8945
                     /locus_tag="VEV83_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45539.1"
                     /translation="MNKILVRDFLRPLIIFFIAANALCLVFGEWLDAKGIDHIILMYA
                     NLILFLLTLITSVMHIKAINSNNPHAFVRGITASAFIKLIVIGASVLLYLFSAGEKRN
                     IYAIAAAMLLYLVYTILEVTGAMRMNRKKNVES"
     gene            8932..9552
                     /locus_tag="VEV83_10255"
     CDS             8932..9552
                     /locus_tag="VEV83_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HYK45540.1"
                     /translation="MSKAEHPLHALAEFLPANTFAQVAGYLNKYKVHLTITRERRSLL
                     GDYRNAVHGKNHRITVNGNLNNFAFLITLVHELAHLLAFEQYGNRILAHGGEWKRIYS
                     NLLNDFVGKKIFPADVEHALLQSMQNPAASSCAEEGLTRILRRYDDPKRNICLLEELP
                     PGTFFKTHDGKIFQKGERLRKRFRCKEKSTGAIYLFSPVYEVKQVV"
     gene            complement(9628..9933)
                     /locus_tag="VEV83_10260"
     CDS             complement(9628..9933)
                     /locus_tag="VEV83_10260"
                     /inference="COORDINATES: protein motif:HMM:NF024189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YXWGXW repeat-containing protein"
                     /protein_id="HYK45541.1"
                     /translation="MKKQFLKYLLVLSIFVGASQLTQAQTRVYVKVQPKSTIVARPAM
                     PHAGYVWVGDEWSPKGGTYVRVAGHWVAPRKGYVYVAGHWGREGRGYYWVPGHWRRV"
     gene            10107..>10592
                     /locus_tag="VEV83_10265"
     CDS             10107..>10592
                     /locus_tag="VEV83_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012787918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HYK45542.1"
                     /translation="MAEEKSLNFLEEIIENDLKAGKYDRIVTRFPPEPNGYLHMGHAT
                     SICLNFGLTKKYGGYTNLRFDDTNPVTEETEYVESIKDDVRWLGFEWKNELYASDYFD
                     KLYQFATDLIKKGLAYVDDSDSETIAAEKGTPTEPGVNSKYRERTIEENLRLFSEMKA
                     GK"
BASE COUNT         2733 a         2423 c         2278 g         3158 t
ORIGIN      
        1 cgggaaactc ctaatattgc acctataaat gtcgaaactc ctcacgcata ttggtcggta
       61 tcttttgatg atcaggggca tgtttacacg cccggagaat ttcagaatgt attggaaaga
      121 atttatgcac cagtcagctg aaattggcat cggctctctc cctattgtgg tgatcatttc
      181 agtttttctt ggtgcggtaa caacggtgca aactgcgtat cagctcgtaa gcccgctgat
      241 cccgaaagca acgatttcgc aggttgtgag agatacgatc gtactcgaac tttcaccaac
      301 attggtatgt atcgtactgg caggcgtggt gggaagtaag atcgcgagtg aacttggaaa
      361 catgcgcgtt tcagaacaga tcgatgctct tgagatcatg ggcatcaaca cgcgcaatta
      421 tcttatcctg ccaaagatcg cgggagcctt tttggtgatt cccgcattga tcgttatttc
      481 aattggactc gcaatctggg gcgggcgaat ggccggcagc ctgtctggta ttttatcaac
      541 ggaaactttc gacattgggc ttcggctgga gttgaatctt cacaatattg cctttgcaat
      601 gtataaagcg tacactttct catttattat aagcagcgtg tctgcttatt ttggatacta
      661 cgtaaaaggc ggctcgtttg aaattggccg cgcgagtaca actgcggtga tcgtgagctg
      721 tatcctgatc cttatggcgg actatattct ggcttcgttg ttactttaaa attttttcca
      781 acattaaaaa atatgatcgg gctttaccag ttgcgggtat tgcttttgaa attctttgat
      841 ctcagggata gacacgtatt gaacataacc actgttcggg ttgtgttcaa tataattctg
      901 gtgataggct tcggcttccc agaattttgt gaaaggaacc acctgcgttg ctaatggttt
      961 gctgtactta cctgacgcgc tcagttcctt catttctttt tcaatgatct gcttttcagc
     1021 gtcgctccga tagaaggcga tggagcgata ttgtgtgcca tgatcagggc cctgcccgtt
     1081 aacctgggtc ggatcctggc ctgcaaaaaa tactttaacg agcgtttcgt aggtcacaat
     1141 ctttggatca taataaacat tcaccgattc agcatggccg gtgttgccgg tttctaccat
     1201 ttcgtaactc ggattggctg ccgtgccacc cgcataaccg gacactgctt ccttaacccc
     1261 cttcacactt tcaaataatg cttcttcgtg ccaaaaacat ccggcggcaa atgtggcgac
     1321 agtatagttt ttgtattgcg aaggtgaaag atgttccgct gaactagccg gttgtttgct
     1381 ttgtgcacaa gcaaccaaag tagttatcgt aaacaaaaat aaagagctaa gcttcataag
     1441 aattttttac aaatctacgt agcgaaatac ccgtttggat gtactcggga cgacaacgag
     1501 aaaaccttta acattgtcaa tggcgagttg tcgatggtaa atggcttatt aactcctaca
     1561 tcgatgtcca accgcgcgtt cgttcattgc aaaaaataca acattacctt tgacgtgatt
     1621 ttggaaacaa aatgaacatt ctttattgag cttttgaata ttgaaaattt gtcttcacgt
     1681 aaacccctct tacttcttac ctcttacttc ttacttctta cctcccgccg ataagaatac
     1741 ttcccgaaac ctcgccaggt atttgccgat aacatcaaac tcaacattta ctgttgaacc
     1801 attctgagtg ttgcgaatat ttgtatgatc aaacgtgtaa ggaatgattg ccaccttgaa
     1861 gctgttgaat tttatatcga atgccgtaag actgatacca tttaaacaaa tagatccttt
     1921 ttctatgatc aaatgcatga attcggcggg tatttgaaac ctgtattccc aactcccatt
     1981 cttctgttcg acgtcaatgc aagttgctgt ggtatcaaca tgcccctgta ccaaatgtcc
     2041 atcgagcctc ccgttcatct gcatgcatcg ttcgagattt accaggtcac cgtttttgca
     2101 ttcgccaaga ttcgttttcg aaagcgtttc ttcgatcgct gttacgcggt gcatattgtt
     2161 ggcgatttcg tccaccgtta aacaaacacc gtcgtgactc acgctttgat caacccttaa
     2221 ttcatttgaa atggcagaag agatccagaa ccttaaatta ttttcattcg gttcaataga
     2281 atgaataatc cctgttgctt caatgatgcc tgtaaacatg cggtaaaggt cgtgcgaata
     2341 tcaacgttgt taacgtttct gatcgccgtc tttttttggc atgatagctt tcggtttttg
     2401 ggacgaatcg atcgggggct ttgtgttgtt cttgttcacc ggcggtttgc tattgtcatt
     2461 cgtattcgcg ggcggcttct tactttctcc ggatggggat tcctcattat tgtaaagatc
     2521 ttccgtattg ctctcgggcg caatattttg cgggtttgtg ttatcataac cctgctcgta
     2581 atcggacgat tgtccattac caacatcgtc gccctgggca ccaaggtcca tctggacgtg
     2641 gttaatgtaa tcatagttcg gttcatcaat tccaacgtct ggcttcgcga agtcggctgt
     2701 atctgaataa ggcagcgttt tatcgtgctc aactttattg tagaaatatg cccatacagg
     2761 taatgcggct gaagcaccct ggccattggt tgtgctgcta aagcgaatga accggtcatc
     2821 gcaaccggac catacgccac ctataagttg cggtgtgtat ccaatgaacc acgcgtcgct
     2881 gttatcattg gtcgttccgg ttttaccagc gattgctcca ttcactccat agctccacat
     2941 tcttctgccc gtgcccgatc taacaacacc ttccatcatg ctgatcacga agtaagcagt
     3001 tacatcgctg atgatctctt tgcgctgcgg tgtgtacgtc tccagcacat tgccattctt
     3061 gtcttcaata cgagttatgt acataggctt tacattaaag ccgcggcccg ggaacatgct
     3121 atacgcctgg atcatctcat acaaagaaat ttcgcaggcg cccagtgcta tcgatggata
     3181 cggatcaatc ttcgaagttt gaacattgca gttctttaaa aattctacaa accgttgtgc
     3241 accctggttg tccttcgaac ctcccagctg tttcataata taggctgtcg cacaattgcg
     3301 cgaccacata agggcagaac tcattggcat tgtattgccg gtacatgacg tgcctgtcgc
     3361 gggaaccatt ccatactgtc cgaaactttg ttgctggtcc acgaccattg tgtttggcgt
     3421 gaaaccggca tcttcgatcg cgaggctgta caatagtggt ttgatcgttg aacctacttg
     3481 cctgcgcgta ttgatattaa catgatcaaa tttgaaattc ttgaaatcga tcccgcccac
     3541 ccaggccttt acatgacccg tcaaaggatc cattgacata aaaccggttt gcaacatctg
     3601 cctggaatat tttatggaat cgtacggcgt catcatggtg tctttctcgc ggttattatt
     3661 ccaggcaaaa accttcatgc gcgtgcttgt aaaaaagctt ttgcgtatct cttgttctgc
     3721 taatccgtct tccttcatgt ttttccaacg gtcgctggcc ttcatcgctg cctccagcac
     3781 attttcatga tccttccaca ctgaaccagt tttaatattg ctctggctgt tcaggatctt
     3841 ttgcatataa ctcatatgtt tcgctacagc ctcctcggca tataactgca tcttgggatt
     3901 tatggtcgta tagatcttca aaccgtcctt gtacaggttg tagttatcgc cacccgcttt
     3961 tgtatgagac ttacaccatt ttttcatttc ctctcccaac accattctga agtaaggtgc
     4021 aagacccgca ttttcattta gctttctgta attaagtgct atcggcattt tcgtgagtgc
     4081 agccgcttgc ccttcgctga gataattgct gcttaccatt ttgtttataa caaaatctct
     4141 gcgctctttg gcccgtgccg ggtacaagcg cggattgtaa gctgtaggcg cgttaaccat
     4201 accgatgagc acagcagcct cttcaactgt aagacgatct ggttcttttt ggaaaaaagt
     4261 tttcgacgcg ttccggatgc catacacatt atcactgaaa ggaacggtgt tcaaatagat
     4321 ggtgagaatt tcttctttgg taaagttgcg ttcgagtttt atcgcaataa ttccttcttt
     4381 gatcttctgg ggcaggcgta caaaaatatt tgagctgtag tttgtgaaaa gattttttgc
     4441 ggcctgcatg gtgatcgtac tgccacctcc ctggctgccc agtaaaaaga tcgccctcgc
     4501 aagcgatcgt ggatcaatcc cattatggtc ataaaaacgt tcatcttcag tagcgactaa
     4561 cgcctcgata acatatttgc tgatgtcgct gtactttacg ttaaccctgt cctgcagata
     4621 atatttgccc ataagcgtgc cgtcgtcggc atacacctgg ctggcgagtg aagctgaagg
     4681 attctggagc tcttcgatcg aaggcattga gccgagccac ccaaggtctg ctgctacgat
     4741 cacgagtact ccaacaccaa tagtgataaa gaacactttc cagagaatgc gcacggactt
     4801 ttttattccg gaaactttcg ctttcttttt tgctgttttc tttgctgcgt ctttcttcat
     4861 gaattatatc agaattttcc cggcaaaact tgttcgatta atgattgata tccctccagg
     4921 tcttttgtat cgttcaagac gtcaagattc tgttggctga tgatcgagaa actatatttt
     4981 tcaggcttta gccacggaat gatcatacgg ggcgcttgcg gtttcacctt ttcaacgtat
     5041 agcatcgctg ttgcagcatc gctaaacggc cccagcaaaa ccacattcat ggtatccgtt
     5101 aacctggcgg aggaaatatt tattttttga ttgtaaaaat tcgactggtt atagcggttg
     5161 aaagcattgc gcgtttcgtt ggcatacaca ggatcaacct tgttcaaaaa aatcactaca
     5221 aattgctggg cagacggatc aaagacgtat gtcttaaccg taccggagat cgtttttaat
     5281 gaatcgacat gctggtttgc cgttttgcta accgagctgg acacgacaga atcttttttg
     5341 atctcttttt tctcaacaat attttctaca gcgtctagag taaccacccg cgaaggctcg
     5401 tcttcagaca aacgcgttat ctgcaagttg gtcaaatacg cttcaatttc ttttctgcgt
     5461 cccagtacat cgatcatggt ctgtgctttt tcggccaggg gcgtgttcgc gaattgagtg
     5521 gttaaattgg tgagcgctgc aatagcagtg ctgtcttcac gtttggaaac ataatagatg
     5581 gattcaatgt acagcaattg cggcgtccaa taagaatttc catatgtgct gtccgcgtgt
     5641 gccttcgcgg tttttgcttc atcaaaatta ccttctataa aaagattgta tatcctttca
     5701 tattctttcg ttgccgcatc ttcgggcttt tcggtctgga aagcagcagc aggattattg
     5761 ataaacgctg caaactttcc atctttgaac tttgtcgtca acgcagtccg tgctgaatct
     5821 gctgaaaatt tcttccctat tttattataa caataataca aaccaaacaa agattcttcc
     5881 aagtgagaat tgtccgggaa ccgcctgttt aaagtttcgt aagcatcgat agctgcaaca
     5941 taatcttcaa gttgattctg aaattcctgc ccgttactaa aaagcgcatc tgcgatgcgg
     6001 ttattcgacg cctgcatttg ttcttccgtc aatggcacat tagccagcaa gccgtcgtaa
     6061 cttatgtcag aaggattctg taatgtaaca agcatatttt gcgcattaga ctgtgctgtg
     6121 tcatccgact gttcattgtc atttgttgat gtctgcgcga tctgtttatt tacagcatcc
     6181 tgccgcctcc agttatctac gtttgcacga ttgccccatg tagaacggaa gccgctgaac
     6241 ccggtctgcc gcatcgcatc attattaaaa taccaatcgc ttttcgacga gctggcaaac
     6301 aggtctgaag cagcggctgt gttgttggga ttttgcatca ccgcatcatt aacaaaaacc
     6361 gtactgtcct gctccttcaa tccctgttct ttacgcaact gccgaacagt tttctttatt
     6421 aatgccgtac gttggtccgc cggcatatgt gctaccgttt gcaaactgtc ctcagcatga
     6481 actaccgcaa gatttgttgt aatggtatgc aaagcttcga gccggtcatt caatctatgt
     6541 tggtctgctt ccgcgaggct gcttacatca acactgtcat aattattcgc agccgctttg
     6601 taatcaggct tcaggtactc aagatcgccc agtaacataa acgaccggct gcgttgtatt
     6661 ggattattga cgttgtactt tatgcttttt tgcagatcgg ccgatgccgc cggataattt
     6721 ttacgatcga cctcgatctg tgcggcagtg taatagatca tgtcgcgata ggcaacgtac
     6781 ctgtctttgc gggcaagtcc catcaacgcc gcaatttttc tgtctgatgc gtctgatgaa
     6841 tcgtcggagg cttcaactgc attcaaactt gcatacacgg ccatgctggg atctattgtg
     6901 tgctcggctg cgtatttgaa atatttttcc gcttcatccc gtaccccgga ggcaaggtag
     6961 agttggcctg tcaggaattc cctccttgct ttttgctgac ggctgatatc aaggttcgtg
     7021 gccttactca aatggaatgc ggcgctgtca tcaacatatt caagataaaa caaataacca
     7081 agtgcttcgt gcagttcggg ctgtaaccgt tcaggaaaat aaggatcgct cctgaggatc
     7141 tgcaaaatac cggaagcctg cccaagcttg cctgcagcca tatagttctt cgcgacccag
     7201 attaggttct gattgcggcg aggtggcgtc gaaaatgttt gcgaaatacc ttttttctct
     7261 ttcgtggaga tagtaaaaac ttttccgttc gcgttgcttc ccatcggaat gtcatagcca
     7321 tcgtccttgg gagcaaacgc ataatttaga tacaggaaca catgttctgc cgaatcaaaa
     7381 ttcttccgaa gataatacgc ctttcccatc aggaaataca tgtcatcgat ccagtcgttc
     7441 cgcagatcat gcaataaaat gcctgcattg catttgtaaa taacactgtc cagatcctgg
     7501 tcgacagatg tcacatcaag tgaataatcg taataaggca acagttgcgt ataatcatcc
     7561 ttattcgcct ctttcgcccg ggcaatgata tcattgagcc ggttatctgc attaaaaaaa
     7621 taattgtagt gtgttacggt gttttggtat aatttctttc catacccgat ctttccgtct
     7681 cctgtttttt cagaaccaag ggtgcgattc tcatattggc tgggtttctt gaggtccacc
     7741 gtagtaccgg gttgcgcatg aacgtgtgcc gccaaaatta tcccaaccaa aacaagtaac
     7801 acgaatccgg catttcccat gcggcaaata ttcatattat ttaactgata tagcgttcaa
     7861 attattttaa aaatacagtt atttttccgg ccaatagcga acctttgcac gggtttactg
     7921 tgggagcctg ttatgtcaaa aataaatcca aatacaacac taaaacggtt gcaaaaccgg
     7981 taccgcctgg tattgatgaa cgatgacact tttgaggaag tagttaagtt ccggctttca
     8041 cggtggagtg tttacattgc gttcagcacc gttttcttgt tgctcgtcgg ttttactgtc
     8101 gcacttctcg ttttaacgcc gctaaaatat tatattccgg gctacggaaa atctgaaaac
     8161 aggactgaat tgcagctctt aaaaatgcgc accgattctc tgcagcaggc gcttcagtat
     8221 aaagagcaat atttgcagtc gatcaaaaag gttttaggcg gcgatgtaca gccacgtgac
     8281 acgagtacgc taaatgtgcc aaaaaccgaa atctcgcatg actgaagaaa aaaagaatta
     8341 ttcaaataaa gaattgctga taaagtattc atcattaggc gtacaactgc ttgccggttt
     8401 gatagtggct gtcttcgcgg gcaaatggct cgacaaaaaa atagctcttt cattcccgct
     8461 ttgcatctgg ctttttccgt tgctcgtgat cctcggaatg atatttaacg cagtgcgcga
     8521 tacttcaaga aagaaaaatg aataagatcc tggtacgtga ttttttaagg ccgctaatca
     8581 tttttttcat tgccgcaaac gcattgtgtt tagtgtttgg cgagtggctt gacgcaaagg
     8641 ggatcgatca cataatcctg atgtatgcaa atctcatttt gttcctgctg acgcttataa
     8701 caagtgtcat gcacatcaaa gcaatcaaca gtaataatcc tcatgcgttt gtgagaggca
     8761 taaccgcttc cgcgttcata aaactgatcg tgatcggcgc aagtgttttg ctgtatcttt
     8821 tcagtgccgg cgaaaagcga aatatttacg cgatcgctgc tgctatgttg ttatacttag
     8881 tttataccat attagaggta accggagcaa tgagaatgaa caggaaaaag aatgtcgaaa
     8941 gctgaacacc cattacatgc cctcgctgaa tttttacctg caaatacttt tgcgcaggtt
     9001 gcaggatatc tgaataagta taaagtacat cttactatta cgcgggaaag aagatcgttg
     9061 ctcggcgatt accgaaatgc tgttcatggc aaaaatcatc gcataacggt aaacggcaac
     9121 ctcaacaatt tcgcatttct aatcacactc gtccacgagc tggcgcattt gcttgcgttc
     9181 gagcaatacg gcaatcgtat actcgcgcac ggaggtgaat ggaaacggat ctacagcaat
     9241 ttgctgaacg atttcgtggg aaaaaaaatt ttccctgctg atgttgaaca cgcgctttta
     9301 caatcgatgc aaaatcccgc agcgagcagt tgtgcggagg aagggctaac acgcatcttg
     9361 cgcaggtatg atgatccgaa aagaaatatt tgcctgcttg aagagttacc gcctggaact
     9421 ttttttaaaa cgcatgacgg gaaaatattt caaaaaggag aacggctacg gaaacggttt
     9481 cgctgtaaag aaaaaagcac cggcgctatt tatttgttca gcccggtgta tgaagtgaaa
     9541 caagtcgttt agtatgacat tgataacgca tgatgaaaaa aaatgccact acatgcgtaa
     9601 tggcatcaac tccttttgtg gccggcacta gactcttctc caatggccag gcacccagta
     9661 ataaccacgt ccttctctgc cccagtggcc ggctacgtac acatagccct ttcgcggagc
     9721 aacccaatgg cctgctacac gtacatatgt tccacctttc ggagaccatt cgtcacctac
     9781 ccaaacatag cctgcatgag gcatggcggg acgggcaact attgtcgatt taggctgtac
     9841 tttaacgtaa acacgggttt gagcctgggt taactgggaa gcgcccacaa aaattgaaag
     9901 aacaagcagg tactttaaaa actgtttttt catatttgtg attttaagtg aatggatacg
     9961 gatttttaaa aaacaaaccg cgtgctaaat ccggcctgtt ccgcatatgt cctgttaacg
    10021 cttgattata ttctgttaaa gcgattcgct tctggtaacg gccaacgcta agattcaata
    10081 cgcgcacaca ttatctttgc cggtctatgg cagaagaaaa atcgttgaac tttttggaag
    10141 agatcattga gaacgatcta aaggcaggca aatacgatcg tattgttaca cgattccctc
    10201 ctgagccaaa tggttatttg catatgggcc atgcaaccag catttgcctc aatttcggac
    10261 tgacaaaaaa atatggcggc tatacgaatt tgcgctttga cgacacgaat cctgttaccg
    10321 aagaaactga atatgtagaa agtattaaag atgatgtacg ctggctggga ttcgaatgga
    10381 aaaatgaatt gtacgcctcc gactattttg acaaactata tcagttcgcc accgacctca
    10441 ttaaaaaagg gcttgcatac gttgacgaca gcgacagtga aacgattgcg gccgagaaag
    10501 gaacacctac cgagccgggt gttaacagca aataccgcga acggaccatt gaagaaaatc
    10561 tccgtttatt ttcggaaatg aaggcaggca aa
//
LOCUS       DASQJI010000366        10570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1268732,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000366 DASQJI010000000
VERSION     DASQJI010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10570
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268732"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            433..1017
                     /gene="pth"
                     /locus_tag="VEV83_10270"
     CDS             433..1017
                     /gene="pth"
                     /locus_tag="VEV83_10270"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HYK45543.1"
                     /translation="MNKFLIVGLGNIGAEYQHTRHNIGFDVVTAFVLKHKGSFETARL
                     AEKAEIKYKGKNFVCIKPTTYMNLSGKAFKYWLDKEKIAVESTLTIVDEIALPLDTLR
                     LRPGGGDGGHNGLKDIQLALGTDNYPKLRFGIGNNFPKGMQAEYVLMKWFPEELALVW
                     KKIEYCSEVIENFALVGLERTMNAVNTKKFVIEN"
     gene            1088..1699
                     /locus_tag="VEV83_10275"
     CDS             1088..1699
                     /locus_tag="VEV83_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HYK45544.1"
                     /translation="MKIFCVGRNYTEHAKELNNELPPEPVIFLKPKSAMLLSHTPFYY
                     PEFTNELHYEIELVLRISKNGKYIHQSQACKYYNGITVGIDFTARDVQRELQKKGLPW
                     EKAKAWDNSAVIGTWSDLSPDIKKNPIEFSLKLNDTLVQKGSSAEMIFSFDQIVADIS
                     QYFALNIGDLIFTGTPAGVGECVVGDNLKGFLGGNQVFDLEVK"
     gene            1873..3939
                     /locus_tag="VEV83_10280"
     CDS             1873..3939
                     /locus_tag="VEV83_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HYK45545.1"
                     /translation="MLDKTILATAFRLMATARCMADIYESNRQVCKYVHSSSRGHEAI
                     QIATGLQLLSCDFVSPYYRDDSLLLALGYPPYQLMLQLLAKADDPFSGGRSYYSHPSN
                     KESDKPGIIHQSSATGMQAIPTAGLAQGIQFLEQINSSLLRKGDHGELPIVLCSLGDN
                     SMTEGEVSEALQFTVLKQLPVIYLVQDNGWGISATAEEARAMNAFEFADGFKGLHKIE
                     VDGSVFEDAYDAMKYVIGYTRNERKPILVHANVPLLGHHTSGVRKEFYRSKEDLEKHA
                     SNDPFLKLKKYLIETGFDEKEMNAIEAKASDEANDAFERAKKAEEPSPESVSMHVFAE
                     TPVKEETGNRQPPNGDKIIMVDAALHAIDELMQQHEECVLYGQDVGRRLGGVFRETAK
                     LAEKFGDHRVFNTAIQEAYIIGSTAGLSALGLKPIVEVQFADYIYPGINQLVSEIAKS
                     NYLTFGKFPVSMILRVPVGAYGGGGPYHSASVESTLLNIKGIKVCYPSNAADIKGLMK
                     AAYYDPNPVIMLEHKGLYWSKVPGTDDAKTIEPASDYVLPMGKGKIILRADESNVMNG
                     QSVCIITYGMGVYWAKAAAFQFKGMIEIVDLRTLFPLDEELVFSTVREHGKCLVLTEE
                     QQTNSFAEALAHRISHNCFQHLDAPVEVLGALDLPAVPINIILEQAMLPTVDKVEKRI
                     AKLLIE"
     gene            3993..4066
                     /locus_tag="VEV83_10285"
     tRNA            3993..4066
                     /locus_tag="VEV83_10285"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4027..4029,aa:Met,seq:cat)
     gene            4416..6959
                     /locus_tag="VEV83_10290"
     CDS             4416..6959
                     /locus_tag="VEV83_10290"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK45546.1"
                     /translation="MRFLVCSFLILNNLTAAGQLSADFLASTVKGCTPLTVQFRDQSA
                     GNPTSWFWDFGNHTTSTLQNPTAVYTDSGSFNVRLFVRNAGSADYEEKANYIIVSQTP
                     EPQWTTLADSGCAPLKAAFTNITDILNASWLWDFGDGGTDSSQNPTHVFQSSGIYTVS
                     LTASTAAGCAATLTVADAVRTGDKPKPDFTFMPTSGCASELRYFTNTSSGAVTSSFWS
                     FGDGGVSVQHDPIYHYQDTGWMSVKLVAANNGCKDSIVKKRVLHVTGPVALMRAHIYC
                     DDRFTVKFVDESIDENNRKWNFDDGTSGKQRAETHVYASEGVYTARLKVDNGSCYDTA
                     SYRLHVTAKKPQLAVVPQKTLYCKGDSILFAFTNYDTAFARSFSLDFGDDSVTGVGPK
                     WDSATYAYANKGSYMVTGYFTDKEHCIDTITLNSPVVVTAPNPEFSFSNPDCIGMPIN
                     FSDKSTVDNGASLTRWIWNFDDGTMRYSANQVYNYSFPLTYNVSLLVKDSNGCADSIY
                     HEVEVGDIPVVHASIDTFLCAGQAATLHASGATNYLWTRASELNCNNCSDPVATPLHT
                     ATYYVTGSNRFGCSSQDSVKIVVQEKQKVNLAAPPVSSCAGDSIHLLANGADSYLWSP
                     QSCLNNATIANPTAFPTANTTFMVIGKDRNSCFSDTATMNIIVRKKPSVNIADSIVQL
                     LAGSSYQIRAIGSEDVQRWQWLPANDLSCTNCALPTATVKGNVRYTVSVSNALGCTSE
                     DAINLISLCTQEVLYVPNTFSPNNDGMNDYFFPRSNKGVVIKSLRIYNRWGQVVFQKS
                     NFPANNYAYGWDGKFNNATQKSDVYVYIMEVECSNGNTVIRKGDVSLLR"
     gene            complement(6962..8161)
                     /locus_tag="VEV83_10295"
     CDS             complement(6962..8161)
                     /locus_tag="VEV83_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HYK45547.1"
                     /translation="MSQLTISKRGYNMPPSPIRKLVPYAEAAKQKGVKVYHLNIGQPD
                     IETPKPVLDAVRRSDLKILEYSHSAGNESYRRKLVSYYEKNGINVQHSQIMITTGGSE
                     AILFGFMACMDPGDEVIIPEPFYANYNGFAVSAGVNVVPIISRIENGFALPPIEEFEK
                     VITKRTRAIVVCNPNNPTGYLYSREELEVLKQIALKHNLYLFADEAYREFCYESTHFS
                     AMQLDGCDDNVVLMDTISKRYSCCGARIGAFITRNKELYNTAMKFAQARLSPPGFGQI
                     AGEAAIDLPDNYFDVTKAEYKARRDLIVKRLNAMEKVFCPNPGGAFYAMAKLPIDDSD
                     KFCQWLLEDFCYNKQTVMLAPATGFYGTKGLGRNEVRLAYVLNRDSINGAMDCLEKAL
                     EQYPGRT"
     gene            complement(8294..>10570)
                     /locus_tag="VEV83_10300"
     CDS             complement(8294..>10570)
                     /locus_tag="VEV83_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIM-barrel domain-containing protein"
                     /protein_id="HYK45548.1"
                     /translation="NYGILWDNYSLTTVGDIRPFQPLSSLKLFSADDQSGWLTTLYFN
                     DKNDLTKPAFIKAESTINYPYLNDTRQRLPANFNIANGMIRWEGSIQSDITGDHSLRF
                     TYAGYFKIWIDGKLLADRWRQAWNPGSVVLHQSLVAKKKYSIKIEWIPDGGESYISAK
                     YLPPVNASEKNDYSFSSEAGKEIRYYFIYGNSADEVIGGYRTLTGKATIAPKWAMGFW
                     QSRERYKTQDEILNTVAEFRKRKIPLDNIVLDWSYWKQDQWGSQEFDESRFANPDSMI
                     SVLHDQYKTHFMISVWPKFYEGIKTYNQFNKNGWLYTRNIADSQRDWIAQGYVSTFYD
                     AFNPQARKAFWDLLNEKLYKKGIDAWWMDASEPDILSNVSPEKRKELLNPLALGPAAE
                     YLNAYPMENAKGIYEGQRETNPNKRVFILTRSAFAGSQHYGAAVWSGDIASRWADMKS
                     QIAAGINFSLSGIPYWTMDIGGFAVEHRYEKPNDKDLQEWREQMTRWYQFGAFCPLFR
                     VHGQFPYREIFNTAPDDHPAYQSMLYYDKLRYNMLPYVYSLAGWCYVSDYTMMRGLIM
                     DFQNDPAVKNINDEYMFGPALLINPVYEYNARNRDVYLPAGTGWYDLYSGKHFNGGNT
                     IKANAPYEKIPVFVKEGAIIPFGANMQYTNEKKADSITLYVYTGRDGRFDLYEDEDTN
                     YNYEQRKYSIIPIRYNELAKTLTIGKRDGSFDGMLQKRIFNIVWIDPVKPVELRPGVM
                     TGDATVQYDGNAVTIKMK"
BASE COUNT         2884 a         2411 c         2357 g         2918 t
ORIGIN      
        1 gaggatcccg gtcgcatctg ttgtcttaac gcggcaattg aagcaagaag aagctacaat
       61 cgcaccggcc gccacaaccg cggctccggc agcgggcgcc accacaccgg cagcacctgc
      121 aggcaagggc gcacctgcgg gcaaagcagc atcttcaaaa gaagaaaaga agaaatagaa
      181 atattttacc gttttgcaaa aggccctgga cttgttcagg gcttttgttt atggagccgg
      241 aagatgtctc tcacagattt tcacagatgc caggtagctg tgtcaatccc tcggagctga
      301 aattcttaat tgttcatttt tgcagaacac ctcttaagaa tttacggttg ttcacccagc
      361 tcgcacgacg tactgaatga cccgtgatca tctgcgtcta tctgtgagcg ctgaatttat
      421 tagtcggaaa agatgaacaa gtttttgatc gttggtttag gaaacattgg tgccgaatat
      481 cagcacacac gccataacat cggcttcgat gtggttactg cttttgtcct aaaacacaag
      541 ggaagttttg aaacggcgcg actggctgaa aaggcagaga tcaaatacaa aggaaaaaac
      601 ttcgtctgca taaaaccaac aacctacatg aatctcagcg gcaaggcgtt taaatactgg
      661 ctcgacaagg aaaaaattgc tgtggagagt acattaacca tcgttgatga gatcgcgtta
      721 ccattagata ccttaaggct caggccagga ggcggcgacg gaggacacaa cggcttaaaa
      781 gatattcaac tcgccctggg caccgacaac tatccgaagc tgaggtttgg gatcggcaac
      841 aattttccga aagggatgca ggcagagtat gtgctgatga aatggttccc ggaagaacta
      901 gcactcgtgt ggaaaaagat cgaatattgc tcggaggtga ttgaaaattt tgctttggtt
      961 ggacttgaac gcactatgaa cgctgtaaac actaagaagt ttgtgattga aaattaaaat
     1021 ttccctgtaa catacttttt aaagtgattt gtattatatt tagcctcaag ctgcaaaggt
     1081 cctttctatg aaaatatttt gtgtaggccg aaactatact gaacatgcaa aggagctgaa
     1141 caatgaactg cctccggagc cggtgatttt tttgaagccc aagagtgcga tgctgctttc
     1201 tcacacacca ttttactacc cggagtttac gaatgagttg cattacgaga tcgagctggt
     1261 cttacgcatt tcaaaaaatg gtaagtacat tcatcaatcg caggcttgca agtactacaa
     1321 cggcataaca gtaggaattg attttacagc gcgcgatgta cagcgtgagc ttcagaaaaa
     1381 aggtttgccc tgggaaaaag cgaaagcgtg ggacaactcg gctgttattg gaacctggtc
     1441 tgacctttcc cctgacataa aaaaaaatcc gattgaattt tcattgaagc tcaatgatac
     1501 gcttgttcaa aaaggtagta gcgccgagat gatcttttcg tttgaccaga tcgttgctga
     1561 tatttcgcaa tacttcgcct taaatatcgg cgatcttatc ttcaccggca ctccggctgg
     1621 agtcggtgaa tgcgtggtcg gcgataactt gaaaggattt ctgggcggca accaggtctt
     1681 cgaccttgaa gtaaaatagt tcttaaagcc cccgcacgtt cggacggaca aaaggtctct
     1741 atcttatcta attgcgaaat cgcgatacat ccttcaaaag gtccctttgt cgtgagatca
     1801 tagccgctca aaaaatttca accactcaat gcgttccttt tttattctca gtgataggca
     1861 gatatttgcg ccatgcttga taagacgatt cttgccacag ccttccggct aatggctacg
     1921 gcgcgatgta tggctgatat ctatgaatct aaccggcaag tatgtaagta tgttcactct
     1981 tcttccaggg gtcatgaggc catccagata gcaacagggt tgcagttgtt gtcctgcgat
     2041 tttgtaagcc cttactatcg cgacgacagc ctgttgcttg ctttgggtta tccgccttat
     2101 caattaatgc tgcagctttt ggcaaaggct gatgatcctt tttcgggtgg ccgctcttac
     2161 tattctcacc caagcaacaa ggaatctgat aagccaggca ttatccatca aagcagtgct
     2221 acggggatgc aggcgatacc cacagcggga ctggcgcagg gaattcaatt tttggaacag
     2281 atcaactctt ctttgttgcg aaaaggtgac cacggagaac tgcccattgt tctgtgcagc
     2341 cttggagata atagcatgac agaaggcgag gtgagcgaag cattgcaatt cacggtgctc
     2401 aagcaattgc ctgtgatcta tctcgtgcag gacaatggat ggggcattag cgcaacggcg
     2461 gaggaagcaa gggcaatgaa tgccttcgaa tttgcagacg ggttcaaagg attacacaag
     2521 atcgaggttg atggcagtgt tttcgaagac gcatacgatg caatgaaata tgtaattgga
     2581 tacactcgca acgaacggaa accaatcctt gtccatgcca acgttccttt acttgggcat
     2641 cataccagcg gcgttcgaaa agaattctac aggtcaaaag aagatcttga aaagcacgcg
     2701 tctaacgatc cgttcttgaa actgaaaaaa tatcttatcg agacgggctt tgatgaaaaa
     2761 gagatgaacg caattgaagc aaaggcgagc gatgaagcga atgatgcatt tgaacgggca
     2821 aaaaaagctg aagagccttc gcccgaatcc gtttccatgc atgtatttgc tgaaacgccg
     2881 gtgaaagagg aaacaggcaa caggcaacca ccaaacggtg ataaaataat tatggttgat
     2941 gcagcactgc atgcaatcga tgaactaatg cagcaacatg aggaatgcgt tttatatggc
     3001 caggatgtag gcagaagact gggtggtgtt tttagggaga ctgcaaagct ggccgaaaaa
     3061 tttggcgacc atcgcgtgtt caacactgcg atacaggaag catatataat aggatctact
     3121 gccggattaa gcgcactggg tttaaagcct atcgtggagg ttcaatttgc cgactatata
     3181 tatccgggca taaatcaatt ggtgagtgag atagcaaaat caaattatct cacattcggg
     3241 aaatttccag tgagcatgat ccttcgcgta cccgtgggcg cctatggcgg gggcggccca
     3301 taccatagcg ccagcgttga atcaaccttg ctgaacatta aaggcatcaa ggtttgttat
     3361 ccgtccaatg ccgcggatat taaaggattg atgaaagctg cttactatga tccgaacccg
     3421 gtgatcatgc ttgagcataa aggtttatac tggagtaaag tgccgggcac tgacgatgca
     3481 aaaacgatag agcccgccag cgattatgtt ttgccaatgg gaaagggaaa aataatcttg
     3541 cgggctgacg agagcaatgt aatgaatggc caaagtgttt gtataattac ttatggaatg
     3601 ggtgtgtatt gggcaaaagc cgcagcattc caattcaaag ggatgattga aatcgttgat
     3661 ttaagaacac tttttccttt ggatgaggaa cttgttttct caaccgtacg agaacatgga
     3721 aaatgtttag tgcttactga ggagcaacaa acaaattcat ttgctgaggc gctagcacat
     3781 cggataagtc ataattgctt tcagcatctt gacgctccgg tagaagtgtt gggcgccctg
     3841 gatctgcctg ctgtgcccat aaatattatt ttagagcagg caatgttgcc aaccgttgat
     3901 aaagtggaaa agcgcattgc gaagctgtta attgaatagg aaaatctgca aaattcaacc
     3961 tcagaatagc ttatttttgc ggctcttttc gaggcgggat agctcagttg gtaagagcgt
     4021 cggattcata acccggaggt ctcgggttca attcccgatc ccgctacaaa aggctgaaac
     4081 gcttaataaa gaagcatttc agctttttta ttgcagtctt catcaacgag ttttatccaa
     4141 ccagttcttc ctgccgcctg gctaattttt ccattgtaac ttttttttat gcgtttggca
     4201 tgcttcatgc gtaatataac ctgtaaacaa gttcctttgc gctgagcgat atcatgtgtt
     4261 acataaaccc ttcggggaac tgttcgtccg gatcatttgt gtaccaaatg accctgctaa
     4321 aacatccgat ccgatgatga tatcatccag tgcgctcatt ttgtaatggg tgttcatcca
     4381 tgagagaccg aaattgcaga atcgctgcca gtagcatgcg gttccttgtc tgttcttttt
     4441 tgattcttaa taatctcacg gctgccggcc agttgtcggc agatttcctt gcgtctacag
     4501 ttaagggatg caccccacta acagttcagt tccgcgacca gtctgccggt aacccaactt
     4561 catggttctg ggattttgga aatcatacaa cgtcaacgct tcaaaaccca acggccgttt
     4621 atacggacag cggcagtttt aatgtgcgcc tgttcgttag aaatgcaggc agtgctgatt
     4681 acgaagaaaa ggcaaattat atcattgtct cccagacacc cgaaccacaa tggacaactc
     4741 ttgcagactc tggctgtgcg ccacttaaag cagcgtttac gaatatcacg gacatcctga
     4801 atgcttcatg gctttgggat tttggcgacg gcggaacaga cagttctcaa aatccaacac
     4861 atgtttttca atcttcagga atatatacag tttctcttac ggcttcaacc gctgcaggct
     4921 gtgcggctac actcaccgtt gcagatgccg tccgcacagg tgataaaccc aaaccagatt
     4981 tcaccttcat gccaacaagc ggttgtgcgt ctgagttgag atactttaca aatacatctt
     5041 ccggcgctgt cacatcaagt ttttggagct ttggtgacgg cggagtaagc gttcagcacg
     5101 acccaatata tcactaccag gataccggtt ggatgtcagt gaaacttgtc gctgctaata
     5161 atggctgtaa agattcgata gtaaagaagc gcgtgctgca cgtaacggga ccggtagccc
     5221 taatgcgcgc gcacatatat tgtgatgacc gcttcactgt gaaatttgta gatgaatcga
     5281 ttgatgaaaa taataggaaa tggaattttg atgatggcac atccggaaaa cagcgtgcgg
     5341 aaacacatgt atacgcatcc gaaggcgtct atacggccag gctcaaagta gataatggct
     5401 cgtgttatga caccgccagt taccggctcc acgtcaccgc aaaaaagccg caattagccg
     5461 ttgtaccgca aaaaaccttg tattgcaaag gtgattctat cctcttcgct tttacaaatt
     5521 acgataccgc atttgcaaga tcgtttagtt tggattttgg cgacgacagt gtaacgggcg
     5581 tcgggccaaa atgggactct gcaacatacg cctacgcgaa caaaggaagc tatatggtaa
     5641 caggctactt tacagataag gaacactgta tcgacacgat cactttaaat tctccggttg
     5701 tcgttactgc accgaacccg gaattcagtt tttccaatcc ggactgcatt ggtatgccaa
     5761 ttaatttcag cgacaaatcc acggttgata acggggcttc attaacacga tggatttgga
     5821 attttgatga cggcaccatg cgatattctg caaaccaggt ttacaattat tcgtttccgc
     5881 taacatacaa cgtgagcctg cttgtgaagg actcaaatgg ttgcgcagat tctatttatc
     5941 acgaggtaga agttggagac atacctgttg tgcacgccag cattgacacg ttcctgtgtg
     6001 caggtcaggc tgcgaccctg cacgcatcgg gcgcgacaaa ttatctttgg acaagagcta
     6061 gtgaattaaa ctgcaataac tgcagcgatc cggttgcaac acctcttcac actgcaacct
     6121 attacgtaac tggttcaaat cggtttggat gttcctcgca ggattctgta aagatcgtgg
     6181 tccaggaaaa acaaaaagta aacctcgccg caccacccgt ttcttcgtgc gctggtgatt
     6241 caatccatct gctggcaaac ggcgcagaca gctatctgtg gagccctcaa tcgtgcctca
     6301 acaacgcgac aatagcaaac cctacagctt ttcctacggc gaacacgact ttcatggtta
     6361 ttgggaagga caggaactcc tgcttttcag ataccgccac aatgaatatt attgtacgta
     6421 agaaaccatc cgtaaatatc gctgatagta ttgttcaact attggcagga tcgagctacc
     6481 agatccgtgc aataggcagc gaagatgttc aacgctggca atggttgccc gcaaacgatc
     6541 tatcctgcac aaattgcgcc ctgcccactg ccacagtgaa aggtaacgta agatatactg
     6601 taagcgtttc gaatgctctt ggttgcacta gtgaggatgc cattaacctt atttcgttgt
     6661 gcacacaaga agtgttgtac gtgccgaaca cgttttcgcc gaacaacgac ggaatgaacg
     6721 actacttttt tccgcgttcg aacaaaggtg ttgtcatcaa atccttaaga atttacaatc
     6781 ggtggggaca ggtggttttt caaaaatcca attttcctgc aaataattat gcgtacgggt
     6841 gggacggcaa gttcaacaac gctacccaga aatcagacgt atatgtgtat attatggaag
     6901 tggaatgctc taatggaaat accgtcatac gaaaaggcga tgtgagcctg ctccgttaat
     6961 tttatgttct gccaggatat tgttccaatg ctttttccag gcaatccatt gccccattaa
     7021 ttgagtcccg gtttagaaca taggcaagcc gcacttcatt tctccccagt ccttttgttc
     7081 cataaaagcc ggttgccggc gcaagcatga ccgtttgttt gttgtaacaa aaatcttcaa
     7141 gcagccactg acaaaattta tcagaatcat caattggaag tttagccata gcataaaaag
     7201 caccaccagg gttcggacaa aaaacttttt ccattgcgtt caatcttttt acgatcagat
     7261 ctctcctggc tttgtactca gccttcgtca catcaaagta gttatccggc aggtcgatcg
     7321 ccgcttctcc cgcaatttgt ccaaagccgg gtggacttaa tcttgcctgc gcgaatttca
     7381 ttgctgtgtt atagagctct ttgttacgcg tgatgaacgc gccgatcctt gcaccgcaac
     7441 aactataacg cttacttatc gtgtccatca gtacaacgtt gtcatcgcag ccatcaagtt
     7501 gcatggcgct gaaatgcgtg ctctcataac aaaattccct gtacgcttca tccgcaaaca
     7561 aataaagatt gtgcttaagc gcgatctgtt tcaatacttc cagctcttcc ctgctgtaca
     7621 aataaccggt tggattgttt gggttgcaca caacgattgc gcgcgttctt ttcgttatca
     7681 ctttttcaaa ttcctctatc ggtggcaaag caaatccgtt ttctatgcgc gatatgatag
     7741 gcactacatt cacacctgct gaaacggcaa acccattgta gttcgcgtaa aacggttcgg
     7801 gaattatcac ttcatctccg ggatccatgc acgccatgaa accaaacaaa attgcttcgc
     7861 ttccgccggt ggtgatcatg atctggctgt gctgaacgtt gataccattt ttttcataat
     7921 agctgaccaa cttccggcga tagctttcgt tacccgcgct atgactgtat tcgagtattt
     7981 taagatctga tcttctcact gcatcaagaa ctggcttcgg cgtttcgata tcaggttggc
     8041 ctatgttcaa gtgatacact tttacgcctt tttgtttggc cgcttctgca taagggacga
     8101 gttttcgaat tggcgaaggc ggcatgttat acccgcgttt gctgatagta agctgcgaca
     8161 tatttgcaaa cctaagaaaa actgtatctg cacgaagcga taaacacaag ggaaatgttt
     8221 gaatgatttt cccgcacgct tacaaatctt tcatcatttc ctaccgtaga tcatcatcaa
     8281 aacgataaaa aaattatttc atttttatcg tgactgcatt gccgtcatat tgaacggttg
     8341 catctcccgt catcacaccg ggtcttagct ccaccggttt gacgggatcg atccacacga
     8401 tattaaaaat tcttttttgg agcattccat caaatgaccc atcgcgtttc ccgatggtta
     8461 atgtttttgc cagctcattg tacctaattg gtatgatgga atattttcgc tgctcataat
     8521 tgtaatttgt gtcttcatct tcatacaaat cgaaccgacc gtcccggccc gtgtacacgt
     8581 atagggttat gctatcggcc ttcttttcat tcgtgtattg catattcgca ccgaatggaa
     8641 taatggcacc ttcttttaca aaaaccggaa ttttttcata aggagcgttg gcctttattg
     8701 tgttgccacc attgaaatgt ttccctgaat acagatcgta ccaaccggtg cccgcgggca
     8761 gatatacatc ccggttcctt gcattgtatt cgtacaccgg gtttatcaac aaagcaggac
     8821 cgaacatata ctcgtcgttg atatttttca ccgccggatc attttggaaa tccatgatca
     8881 atccgcgcat catagtatag tcgctcacat aacaccaacc cgcaagcgag tacacataag
     8941 gaagcatgtt atacctgagc ttatcataat acaacatgct ttgatatgcc ggatgatcgt
     9001 caggcgctgt gttaaaaatt tcgcggtaag gaaactgtcc gtggacacgg aacaaaggac
     9061 aaaaagcacc gaactggtac caccgtgtca tttgctctct ccattcctga aggtctttat
     9121 catttggttt ttcatagcga tgttccactg cgaatccacc gatatccatt gtccaatacg
     9181 ggatgccgga taacgaaaaa ttaattccgg ctgcgatctg gcttttcatg tccgcccatc
     9241 gcgatgcgat atcaccactc cacacagcgg ctccataatg ctgcgaccct gcaaaagcag
     9301 agcgggttaa aatgaagacg cgtttatttg gatttgtttc gcgctgacct tcgtaaatgc
     9361 cttttgcatt ttccatcgga taggcattta aatattcagc cgcgggtcct aacgccaatg
     9421 gattcagtag ctcttttctt ttctcagggc tcacgttgga aagaatatct ggttcgcttg
     9481 cgtccatcca ccaggcatca ataccttttt tatatagctt ttcgttcaag aggtcccaaa
     9541 acgcttttct tgcctgcgga ttgaatgcat catagaaggt agatacatag ccctgcgcga
     9601 tccagtcgcg ttgactgtct gcaatatttc ttgtataaag ccatccgttc ttattaaatt
     9661 gattgtacgt cttgatgccc tcgtaaaatt ttggccacac agagatcatg aaatgcgttt
     9721 tgtattgatc atgcaaaacg cttatcatac tatcaggatt tgcaaaacgg ctttcatcaa
     9781 actcctggct tccccattga tcttgtttcc agtaactcca gtccagcaca atattgtcga
     9841 gcggaatttt tctttttctg aactctgcaa ccgtgtttaa tatttcatcc tgtgtcttat
     9901 atcgctcacg gctttgccaa aaacccatcg cccatttcgg agcgatcgtt gctttaccgg
     9961 ttaatgttcg ataaccgccg atcacctcat cggcactatt cccataaata aaataatacc
    10021 gtatctcttt acccgcctct gatgaaaaac tataatcgtt tttttctgat gcatttaccg
    10081 gtggaagata ttttgccgaa atatacgatt cgcctccatc gggtatccac tcaatcttta
    10141 tagaatattt ctttttggcg acgagggatt gatggagcac gacggagccc gggttccagg
    10201 cttgccgcca ccgatctgct aataattttc cgtcgatcca gatcttaaaa tagccggcat
    10261 acgtaaatcg caaactatga tcgccggtga tgtctgattg tatcgatcct tcccatctga
    10321 tcattccgtt cgcaatatta aaattggccg gcaacctttg cctggtatcg ttcaggtacg
    10381 gataattgat cgttgattcg gccttaatga atgcaggttt cgttaggtca tttttatcat
    10441 taaagtacaa ggtggtaagc cagcctgatt gatcatccgc agaaaaaagt tttagagatg
    10501 acagaggttg aaatggcctt atatcgccga ccgttgtgag cgaataatta tcccataata
    10561 ttccgtaatt
//
LOCUS       DASQJI010000367         3826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_809859,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000367 DASQJI010000000
VERSION     DASQJI010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809859"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..2573
                     /locus_tag="VEV83_10305"
     CDS             129..2573
                     /locus_tag="VEV83_10305"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK45549.1"
                     /translation="MFKNYFIVAFRNFWRNKVFSLINIIGLSIGICASLVIYLVVSYD
                     FSFDKFENDRDHIYRIVTTMHFPGQEFRNSGVPLPIPPAVKKEVTGIDIAAPFHTGNG
                     EVNVSIAGAGKPVVFKKQKDIIYADDNYFKLFPYHWLSGSGEALKQPFTVVITESRAR
                     AYFPYKDVTEAVGQVISYNDSIKATVTGIVKDLDANTDFTFKEFISYSTIENSGLKNN
                     MGWGEWGSINSASQFFVKLNPNADTVNVRKQIEDLQKRNGKNAYLAMSYYLQPLSDIH
                     FNANYGAYSDRQANLPTLYGLLVVAAILLLLGCINFINLTTAQAAQRAKEIGIRKTMG
                     GSKKQLIFQFLSETFLLTVIATVLSLLLVPILLKIFSDFIAPEINIEMLTQTNVMIFI
                     IGLVIVVTLFSGFYPSLVLSGFKPVLVLKNQAFSNTSKTRRAWLRKSLTVTQFIAAQA
                     FIIGAIIVTKQIHYTLNKDLGFRKDGIVILNTPWNFNDADGMGKRQVLLQKLKAIPQI
                     EQVCLGGSPPATNGISMSTMKFNNGKKEIETTVEVKYADADYFNLYKMKLIAGRFPAP
                     ADSSTEYVINENYARFLGFKDPSDAVGKFVDRSGKKVPVVGVLADFYSQSLHTPIKPL
                     VFTADKEYEATFHILLKPNSDGDVWKHAISQIEKSYKAIYPDDDVDYNFLDENIASFY
                     KSEQNISRLLKWATGLAIFISCLGLLGLVIYTTNQRTKEIGVRKVLGASVSQLVALIS
                     KDFMALVVFAFVIAAPLGWWAMHKWLQNFAYRTDISWWIFPLGGILMILIALITLGFQ
                     TIRTASANPVQSLRTE"
     gene            complement(2828..3511)
                     /locus_tag="VEV83_10310"
     CDS             complement(2828..3511)
                     /locus_tag="VEV83_10310"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK45550.1"
                     /translation="MKKMISLFAILIMFAACKKDSALAPSTDNSSTASVATDNDPGMY
                     AAIKIGKQVWMQKNLAASRYRNGDTIPQVKDVAKWAKLTTGAWCWYNNDSATGAVYGK
                     LYNWYAVNDPRGLAPTGWHVSSDADWDTLSTFLGKNAGGKLKDTGTIEAGTGLWHYQN
                     KKATNKSGFTALPGGTRGPDGTYFELIGYHGIWWTSTVRWLANSSGDILYGNVNDKRC
                     GYSVRCLKD"
BASE COUNT         1087 a          842 c          844 g         1053 t
ORIGIN      
        1 agcgcgcggt atttcgtttc caggattcag aagagaagat aaaagaaacc tatgctgcca
       61 aatacgcgaa gatgaaagcc cgtggatatg ttgtaataaa aacagagttt gatttttaac
      121 tgaaatctat gttcaaaaat tatttcatcg ttgcattccg aaatttctgg cggaacaaag
      181 tgttctcgtt gataaatatt attggtttgt cgatcgggat ctgtgcatcg ttagtcatct
      241 acctggtcgt ttcgtatgat ttcagctttg ataaatttga aaacgatcgc gatcacattt
      301 accgcatagt caccacgatg catttccccg gccaggaatt tcgaaactcg ggcgtgccct
      361 tgccgatacc tccggcggtt aaaaaagaag ttaccggcat tgatattgcc gcgccgtttc
      421 atacaggcaa cggcgaagtg aatgtaagta tagccggtgc aggaaaaccg gtcgtattca
      481 aaaaacaaaa ggatatcatt tatgccgatg acaactattt taaactcttt ccttatcatt
      541 ggctgtcagg ttccggcgag gcattaaaac agccatttac tgttgtaatc actgaaagtc
      601 gtgcacgcgc atattttccg tataaagatg taaccgaagc ggtcggacaa gtgatatcat
      661 ataacgactc gataaaagca accgttactg gcattgtaaa agaccttgac gccaacaccg
      721 actttacctt caaagaattt atttcatata gcacaattga aaacagcggg ctgaaaaata
      781 acatgggttg gggcgaatgg gggagtataa attcagcttc tcagttcttt gtgaagctaa
      841 accctaacgc ggacaccgtg aacgttcgca agcaaattga ggacttacaa aaaagaaatg
      901 ggaagaatgc ctacctcgcg atgagttact acctgcagcc attgtctgat attcatttca
      961 atgcgaacta cggcgcctac agcgacaggc aggcgaacct gccgacattg tacgggctgc
     1021 ttgtcgtcgc tgctatattg ttgctcttgg gctgcatcaa ctttataaat ctaacaacag
     1081 cacaggcggc tcagcgtgca aaagaaatag gcatcaggaa aacaatgggt gggtcaaaaa
     1141 agcagttgat ctttcaattt ctttcagaga cctttttgct gacggtgata gcaacagtgt
     1201 tgtcgttatt gctcgtcccg atcctgttaa aaattttctc cgattttatt gcgccggaga
     1261 tcaatatcga aatgctgacg caaaccaacg tgatgatatt cattattggg ctagtcatag
     1321 tcgttacact tttttccggt ttctatcctt cccttgtgtt atcaggattt aagccggtgc
     1381 tcgttttaaa aaaccaggct ttctccaata cttcgaagac gaggcgggcg tggctgcgaa
     1441 agtcgctcac cgttacgcag ttcatcgccg cgcaggcatt tatcattgga gcgatcatcg
     1501 tcaccaaaca aattcattac actctaaata aggaccttgg gtttcgaaaa gatggaatcg
     1561 tgatcctgaa tacaccgtgg aattttaacg acgcggatgg aatgggtaag cgacaagttt
     1621 tactgcaaaa gttgaaggcg atcccacaga tagagcaggt ttgtttgggt ggatctccgc
     1681 ctgcgaccaa tggcatatct atgtcgacaa tgaaattcaa caacggcaaa aaagaaattg
     1741 aaacgactgt tgaagtgaaa tatgcggatg cagactattt caacctgtat aaaatgaaac
     1801 tgatcgcagg aagattcccc gctccagccg atagcagcac tgaatatgtg ataaatgaaa
     1861 actatgcaag attccttggc ttcaaggacc cttcggatgc tgtcggcaaa tttgtagatc
     1921 gctcaggcaa aaaagtacca gtcgtgggtg tgttagcaga tttctattcc cagtctctgc
     1981 acacaccgat caaacccctt gtgtttactg cagataaaga gtacgaggca acgtttcata
     2041 ttttattaaa gccaaattcg gacggtgatg tttggaaaca tgcaataagc caaatcgaaa
     2101 agtcgtataa agccatctac ccggatgacg atgttgatta caattttctg gatgaaaaca
     2161 ttgcatcatt ttataagagc gaacaaaaca tttcgcggct tctgaaatgg gcaacaggac
     2221 ttgcgatctt catcagttgc cttgggttgc tgggcctcgt gatctataca acgaatcagc
     2281 gcacgaaaga aattggtgtc agaaaagttt tgggcgcgtc cgtatcgcaa cttgttgcgt
     2341 tgatctcaaa ggattttatg gcgctcgtgg tttttgcttt tgtgatcgca gcgccacttg
     2401 gctggtgggc gatgcacaag tggttgcaga attttgctta tcgtaccgac atcagctggt
     2461 ggatatttcc actcggcgga attctaatga tcctcatcgc gcttatcacg ctgggctttc
     2521 aaacgatccg aactgcgtca gcgaatccgg tgcaatcgtt gagaacggaa tgacctcaac
     2581 cccagccccc gcctgaatga ctcagtcggg caggcttctc catcccgcaa gtgcggaaga
     2641 taagggagta gaagttcctc tatcggttaa atttttttat tatgtcttta ctgaattctt
     2701 ttgtaaacag aaaagtctcg atcaacaaat cgtaacgctc ctttgtaaac acgtaactcc
     2761 tgatgtaatg ccattgttca aaaaatattt ttcgatgcga gttgcccata ccaccatagt
     2821 gaaatagtca atccttaagg caacgaacag aatacccaca ccgcttatcg tttacgttgc
     2881 cgtatagaat gtcgccactg gagttagcca gccagcggac cgtagaagtc caccagatgc
     2941 cgtggtagcc aatgagctcg aagtatgtac catcgggacc gcgtgtgccg cccggaagcg
     3001 ctgtaaatcc acttttatta gtggcttttt tgttttgata atgccatagc ccagtgccag
     3061 cttcgatggt tccggtgtct ttcaacttgc cacccgcatt ttttcctaaa aaagttgata
     3121 atgtgtccca atctgcatca ctggacacat gccagcctgt gggtgccaat cctcttggat
     3181 cattcacagc ataccagttg tataacttgc cataaactgc acccgtggca gaatcattat
     3241 tataccagca ccatgcaccg gtggttaatt tagcccattt agcaacgtcc tttacctgtg
     3301 gtatagtgtc tccgtttcta tagcggctgg cagcgaggtt tttctgcatc catacctgtt
     3361 ttcctatttt tatggcggca tacataccag gatcgttgtc agtagcgaca gacgccgttg
     3421 aactattatc agttgaagga gcgagtgctg aatctttttt gcaggctgca aacattataa
     3481 ggatagcgaa taaagaaatc atctttttca taacgtaaaa tttaagcgat aaaaattttt
     3541 aaacattaca aagctccagg tcgactaaag aaaaacgatg tctatttaac tatcttgatt
     3601 tgtataaagc actatttttc cctccgtcaa ttaacggatt gagccttttg attgtctcat
     3661 tggagatatt gaaagcaaca ggcggaaatt ttcgatgggg ctacgcactt tacccctaaa
     3721 taatcaaaat agacaaatcg tcaatcccta aggcaacgaa cagaatagcc attacgctta
     3781 cggtcggtgc ccctgcctaa gccgccaagg tcgaagaaca ggacgg
//
LOCUS       DASQJI010000368        23941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2805979,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000368 DASQJI010000000
VERSION     DASQJI010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 23941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23941
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2805979"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..974
                     /locus_tag="VEV83_10315"
     CDS             18..974
                     /locus_tag="VEV83_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HYK45551.1"
                     /translation="MVLVFIDHSDEQIRKSSFEVLSYGAALAEKLGTSAAGLLLGNVS
                     TDLTSLGNYGISVVYQVNDTSLNQLDAQVQSQLVSEAAKKLPADVIVFSHNQTGRAIA
                     PRVAARLKAGLVAGAVALPDTSNGFVVRKNVFSGKAFADVSITSDIKVVSLNPNSFPV
                     STTQAVATVEKLQLEVPAAKVRVTSVNKVKGEVPLTEAEIVVSGGRGLKGPENWAIVE
                     DLAHALHAATACSRPVADSHWRPHHEHVGQTGIQIAPNLYIAIGISGAIQHLAGVNRS
                     KNIVVINKDPEAPFFKAADYGIVGDAFEVVPKLTEEIKKMRQ"
     gene            complement(1047..1514)
                     /gene="rpsG"
                     /locus_tag="VEV83_10320"
     CDS             complement(1047..1514)
                     /gene="rpsG"
                     /locus_tag="VEV83_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HYK45552.1"
                     /translation="MRKAQAKKLPLAPDARYNDKLVTRFINNLMWQGKKSTSINIFYD
                     AVDKISKITGENGYDIWKKALSNVTPAVEVRSRRIGGATFQIPSEVRADRKISLSMKW
                     LIRYSRERNGKTMADKLANEIIAASKGEGAAFKKKEDTHRMAEANKAFSHFKI"
     gene            complement(1535..1915)
                     /gene="rpsL"
                     /locus_tag="VEV83_10325"
     CDS             complement(1535..1915)
                     /gene="rpsL"
                     /locus_tag="VEV83_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HYK45553.1"
                     /translation="MPTIQQLVRKGREIIRAKSKSRALDSCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNKVEVIAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSL
                     DTAGVKDRKKSRSKYGTKKEKAKK"
     gene            complement(2057..3118)
                     /locus_tag="VEV83_10330"
     CDS             complement(2057..3118)
                     /locus_tag="VEV83_10330"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HYK45554.1"
                     /translation="MTGVSEIIITKIERSKLHDINLENIPFGKYFTDHMLEADFENGE
                     WRNIEIKPYQPLLLEPSTSALHYGQSIFEGMKAFRTEKGDAFIFRPYENLKRFNLSAQ
                     RMNMPEISEEIFIEGMRQLIELDKNWIPIKEEHSLYIRPLMFATDNLLGVKPSETYKF
                     LIILSPAGPYHAAPMKIAVEEKYTRAAPGGVGFSKNAGNYGGSMLPATIAKQQGYDQV
                     LWTDAFDHKWLHEVGMMNVGFVINDTFVTPALEETILKGVTRDSVLTILNDMGVKTKE
                     RRISIDEIVDENRKGNLKEVFGMGTAAVISLIEALKYKDLVMKFDTSTFSLAKKVKQK
                     LNDIREGRAEDVYGWMFKV"
     gene            3191..3703
                     /locus_tag="VEV83_10335"
     CDS             3191..3703
                     /locus_tag="VEV83_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45555.1"
                     /translation="MSEQINNFALAELYSKSLVITDDSQPRLPVQPNITASKNNFLGK
                     YEKKIIIAVNDSQNLYLDDESLQFLTGILSACKLNLAHIALINFHHEPTTFAQLKKQM
                     QPEYLLMFGVTPVQIELPFIMPDYKVQSFDNCFFLTAPALPALNQNSEQSKKEKGKLW
                     NSLKKMFDIK"
     gene            3700..4284
                     /gene="rdgB"
                     /locus_tag="VEV83_10340"
     CDS             3700..4284
                     /gene="rdgB"
                     /locus_tag="VEV83_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HYK45556.1"
                     /translation="MKTTLIFATNNKHKIYEVCSLVGERFQVMTLNDAGIDIDIPEPH
                     DTIQANASEKSRTIYQLTGKNCFAEDTGLEVHALNGAPGVKSARYAGEQKSFDENIEK
                     LLLELKAIEDRSAQFKTVVSLIWNGQEHLFEGITKGQIIVEKRGRNGFGYDPVFVPEG
                     SEKTFGEMSLDQKNIFSHRRKAIDKLIGFLNVST"
     gene            4309..4743
                     /locus_tag="VEV83_10345"
     CDS             4309..4743
                     /locus_tag="VEV83_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYK45557.1"
                     /translation="MMERIRINLPQEFNFSTVIKVRITDLNYGGHVGNDSFLSLVHEA
                     RQQFLNHFGYTELDIEHVSLIMADAALEFKKELSYQDEVKISVSASGFDKYGFDIFYK
                     LEVVIEGKFVLAGKAKTGMLCYDYNQKKLMSVPEKVRSRLLG"
     gene            complement(4783..5595)
                     /locus_tag="VEV83_10350"
     CDS             complement(4783..5595)
                     /locus_tag="VEV83_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK45558.1"
                     /translation="MYNLLQGKKGIIFGALNEQSIAWKTAKACFNEGAQLVLTNAPIA
                     LRMGEINNLSKECNDAPVIPADVVNMDDLKKLFEESMKHFGGGVDFILHSIGMSLNVR
                     KGKHYTEIDYGFNQKTLDISSMSLHRVLRTAWEMDALNEWGSVVALTYIAAQRVFPDY
                     NEMADAKALLESVTRSFGYHYAVRKKVRVNTVSQSPTRTTAGSGVKGFDGFINYAEKM
                     SPLGNATAEDCANYCTLLFSDYARMVTMQNLFHDGGFSFTGVTREVIEQMEK"
     gene            complement(5681..6454)
                     /locus_tag="VEV83_10355"
     CDS             complement(5681..6454)
                     /locus_tag="VEV83_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047294 - phosphoglycerol
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0006650 - glycerophospholipid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranylglyceryl/heptaprenylglyceryl
                     phosphate synthase"
                     /protein_id="HYK45559.1"
                     /translation="MKHTLYNQIQERKRSGKKSFAVLVDPDKVNVATTEQLVSLAVDA
                     RIDYFFVGGSLVISNNLDECIRQIKVSCSIPVIIFPGAPSQLSPYADALLYLSLISGR
                     NPELLIGQHVISAPVVKQSGLEIMPTGYMVIDGGAPTTVSYISNATPIPCDKNEIAMC
                     TAMAGEMLGMKLIFMDAGSGAKNPITLTMIEKVASHIETPLIVGGGITNAEKAYRNCR
                     SGADIIVVGNAIEKDASLIKEISDAIHSVPVSAAVMPQR"
     gene            6801..10175
                     /locus_tag="VEV83_10360"
     CDS             6801..10175
                     /locus_tag="VEV83_10360"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HYK45560.1"
                     /translation="MVKEKTDALRFQRRFTKEGVSPFEMFEYDYRTSVIKNPTGEVLF
                     EMNNVEVPKQWSQIATDIIAQKYFRKAGVPQLDGSLGRETSAKQVAHRMANCWKVWGE
                     RYGYFNSAKDAQVFYEELVYSILNQACVPNSPQWFNTGLNESYGITGKPQGHYFVDAK
                     DGQLKKSTSAYERPQPHACFILSVHDDLVNDGGIMDLWIREARIFKYGSGVGTNFSRI
                     RSEGEKLSGGGTSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVCLDLDHPEVMQFINW
                     KMEEEKKVAALVAAGYDSSYEGEAYLTVSGQNSNNSIRVPNEFFKTLEENGDWELKAR
                     TDGRVMKKIPAREVWNQINYAAWRCADPGTQYDTTINEWHTCPKGGRINASNPCSEYM
                     FLDNTACNLASANLMKFFDVEKNVFDVEGFAYTCRLWTTVLEISVLMAQFPSKEVAQL
                     SYDYRTLGLGFANLGTMLMVSGISYDSEQARGIAGAITAIMTGISYKTSAELASVLGA
                     FPKFEENREDMLRVMRNHRAAAYDASDAYEDLSVKPVGINAKYCPDYLLSAACKAWDD
                     AVELGEKFGYRNAQTTVIAPTGTIGLVMDCDTTGVEPDFALVKFKKLAGGGYFKIINQ
                     SVPVALRHLGYSEKEIDAIVKYAVGAATFEGSPSINPQTLSEKGFIAEEIQKLNNAAK
                     AAFEINFLFNKFILGEACLERLGFSAEQYNDWNFDLLTALGFNEEQIEKANDYVCGAM
                     TVEGSPHLKQEHLSVFDCANRCGRKGERYIHAHGHIRMMAACQPFLSGAISKTINLPN
                     EASVDEIADAYMLSWQLGLKACALYRDGSKLSQPLSNKSDKKSSRTDGKKSEVQEEKT
                     ATSNEPAPVTITQEPNIVDLSKLTAEELLEEVQKRMQASNDTSLKRQLSKIVERKTLP
                     AKRRGFTQKAKVNGQVIFLRTGEYGDGTIGEIFIDLAKEGSTLRSLMNCFAIAVSVGL
                     QFGVPLEEFVEKFIFTKFEPAGMVDHPNIKTTTSLVDFVFRALAYEYLGRTDLVHVID
                     KPEITNLSDEGEVNIIGKPALSNMRVMSANSTPQPAPHKLQKTVVKTEAGLDAINAAA
                     KSMQSDAPSCNVCGHITVRSGTCYKCLNCGNSMGCS"
     gene            10546..11892
                     /locus_tag="VEV83_10365"
     CDS             10546..11892
                     /locus_tag="VEV83_10365"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis polyprenyl
                     glycosylphosphotransferase"
                     /protein_id="HYK45561.1"
                     /translation="MFRYLSIYKIAFVNLLAAGMLFIWRTDASHVFLKISICLINAAF
                     LAASFHNISRFVKRNDARLFIGRKRTLIVTMSFGFLGIMIFSAWNESGSRLMFMGVAA
                     WSLLVIVIHIFEDSISAFLHKLFKPGRRIAVVGYNDSSLKIAEKFKRRGKDFFYGHFD
                     FENETETITAAPGGLKSYVQFARQNNITDFYFSLPMFDNEEVAVLIEEAEKHCIRVNF
                     IAPETSPDAGMYRVHYIGGLPVLKRYNEPLRRLHNQLIKRTFDVVLSGLVIVFILSWL
                     VPLVSLLVKMESKGAVFFKQHRSGRGNNSFLCLKFRSMQENAVSDIKQATKDDSRITK
                     VGAFLRKTSLDEFPQFINVFRGDMSIVGPRPHMLRHTEEYNERVNHYMVRLYLKPGLT
                     GWAQVNGYRGEIKNIELMKKRVEHDIWYMENWSLFLDIKIMYLTLVNILRGEENAY"
     gene            11966..12886
                     /locus_tag="VEV83_10370"
     CDS             11966..12886
                     /locus_tag="VEV83_10370"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HYK45562.1"
                     /translation="MQFVDTTGVVVKKDFGSNEGSQLLKNSLMTNMKYRYLSAPVVFF
                     CFLLLFNSCTSYKHFSYFEDLPDTAKPVLATTVPFKEPVIANGDLLSITIQTIDNDVS
                     ALLNSSYSVNGGSTNAPVLGTSTTGSGTQAVPNGYLVDKNGAVTLPFVGAVQVSGMTT
                     AEAKDAVSREVNKYFNNAVVNVRYANFRITVLGEVLHPATYVVPNEKINLFDGLAMAG
                     DITVYGRRDNVVLVRDTIGQKKIVRFNMNNTDIVSSPWFYLQPNDVIYVTPTKAKMAA
                     TDAYRNRSITILAALIGLATLVVSRILWHN"
     gene            12917..15316
                     /locus_tag="VEV83_10375"
     CDS             12917..15316
                     /locus_tag="VEV83_10375"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HYK45563.1"
                     /translation="MSTKITTAEDAFNFKKIVSRLLDNWKLFAISIIAFILLGLFYAW
                     YATPSYNVYAQILIQDDQSSKSSSSLLGTEGGLADFGDLFGLQTNVYNELGILTSHDL
                     QEKVARNMHLNVKYFIKNGIKTVELYNKTPFVVTFIPKNDSTLATTCDLEFKDLGKKN
                     DFKISMSNDLVDTTFSANFNDTVKTPVGKLYFSRTGRAFEDEPYQLTLTSIDAVLVNI
                     PKDLLVEIYNGDATILNLSYKTNVPLKGENFLSELISEYMKRDLSEKNRISDSSLRFI
                     NDRITIVNGELNAIEEQIQNFKQTNKIADLSEQSRVLIDNTSTYNQKLDETEVQLNVA
                     RSTLQYILDQKNNSRPVPSLLNGDPTFLALVQKYNTLLIEQDRFSLSVSENNPLSQNL
                     STQIANLRSDLTKSLQSQIKNLEITKQKIESENALMRNMVNAVPVQERQFVSLTREQS
                     VKQALYLYLLQKKEETAITEAATIPNANIISRPKSDYQKSFPQTTLILIASVFLGLVM
                     PTGFVIMRYALNTRINSRNDITEATSCNILAEIGHDDKGALLPMREQSRAVIVEQFRA
                     FRTNMGFLIGQKKCPKVLITSSMSSEGKSFIAGNLAQIYSLSDKRVLLLEMDFRKPHI
                     SSMFGLNNRNGLTNYIVSGGGRIQDYIQPIKDLPNVFVLSSGPVPPNAAELLMTPVVG
                     KMFDELTDLFDLIIIDSPPIGFVTDAQLLTKYSDVNLFILRERYSFKNSLEIVNDLLD
                     NGKFANMYLVVNDVRKSASSRYGYGYGYGYGYGYGYGYGYGSNGTTKKKSKSRRKKIL
                     G"
     gene            15582..16484
                     /locus_tag="VEV83_10380"
     CDS             15582..16484
                     /locus_tag="VEV83_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45564.1"
                     /translation="MQKEVFSSEKLPFNLLERELIVREIVKKNLFFFDIENARQALVK
                     NFDASKVNVISLENLVGNPHSGGYAGYDNFLKLKLLFPDAKIFVCIREQNSMILSTYK
                     QYVKSFGTLSLKRYLRQTEKGSNVLPAFDLKHFCYDGLINTYKEGFGKENVFVLPFEL
                     LNTNAEQFLGQLFEFSGISADCVQVVNMQKKRKPAMPNFTLSVKRRYNRVFTRTRLNP
                     HGWFAFSTQTDTFPFKAIAFLERKLGKEFQKKSDKKQQRIIEKAVSDFYGESNRRTID
                     LINVDLKTYNYNCNGLNESKRNNE"
     gene            16459..17550
                     /locus_tag="VEV83_10385"
     CDS             16459..17550
                     /locus_tag="VEV83_10385"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK45565.1"
                     /translation="MNQRETMSDQPVFVLGCSKSGTSLLRNLFDGHPAVFAAPLESHF
                     FQHTGSWVSYFFRRSNPRRLTIEQMKNELVSWIDFSNRRVNLFADGFTAGKWDLEKFK
                     ETMFSKQVSGLRELSDLYIESMYVSLYDKPYPGLIFVEKSVENVEFVQEWLKLYPNAK
                     FVHILRNPYSNLVAIRKFMHSVRVPFLNRALVSMQQSYYFLYKNLTLINPAQYKVILY
                     EDLLNDPNKIMTELANFAGIDFEDILLTPTISRETWSGNSTNRTNFTGVSNQNIEKWK
                     DEITRYEIFVVNKLFDHVLTDFKFEKISPDHVKKSLLPKEGLFNYAMNKISYYYLPKP
                     NDRMTDEQRKKSKERFFVQDGMNGSDKKL"
     gene            17577..19070
                     /locus_tag="VEV83_10390"
     CDS             17577..19070
                     /locus_tag="VEV83_10390"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYK45566.1"
                     /translation="MSNIKTILSQSVKMTFYWVLSVSLGFVSNLVYTRFLNPDIFGNF
                     ALTRTLVTFLPLLSLFGLHKGLLRQGSIALGRENEGLYNQIRNYTISVAMIIGFSVGF
                     ITLVGADIIAADFFKKPELATQIRFFSFVIPTLVTSNMVMSLYQVNKMADTGQFLYQV
                     VLFSVLLIIFLLFTLFMKGEPLITWSFFAGHVIYFLLLLHYQRKLGYRFSVKIDKSER
                     KSIYNISFPQFLSAMFNQSQKWSDTFLLGILGTSRQVGIYYIGLRIAGFISIPAAAMS
                     TIFMPIAARLIGQKKNDELNDLYKTVTRVVFVCGTLGFGAVFFLKDYLIALFGKGYQA
                     SAAVIIVILVSETIDFGVGPARQLITMSGGGRINMINSILTLTIDITASFLLIPKYGI
                     MGAAIANAFTNIVLQIVTVVELMVIYKLSPFSKEYFIEASLFVGCILGTVFLPLPNLV
                     KLAIYLVVLSTLYLTITLGKKERQKIRALISEKRKKKRFRVEADQEA"
     gene            19099..20445
                     /locus_tag="VEV83_10395"
     CDS             19099..20445
                     /locus_tag="VEV83_10395"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HYK45567.1"
                     /translation="MEQVLRPNLTEYRRVPNMPVFLLLLFFIPEVTIRMHTFISAGGV
                     PLAFAEPIFFVSFALLILDKWDLNKVFASSFSKYYFIFLAYGIWNLTMSLKYYHNGIG
                     FAGSVFLNVFVYPLSFFLGYHYITEQKQLKNYLRMTQIIFFLYIPLTFVYHQLGVGEK
                     APYLQFFDHYEGWVVSFLIYFALSNYFIYKKVSWFSKFLAFGSIIIIILCNRRGIWIS
                     TFFTCFIIYYVSVRQISFGYLARILLWVGLGVGTYILIVKVAPNNPVVEAVNSRVIQT
                     IENFENPTEFGDNSIAWRLLVVQASFKDFTEHPILGRGIGYQPTVVFPKGTDLWNERE
                     GVAFHDIVIALLVTTGVLGLILFFIMHLKFIFRFLIEKNEIKGEIKPYVASMFGMYAG
                     ALMWAFVANDMWSNANLVIIIYALRGAVVKQLDKAIEEKKKLAAAEVPQNLNLQAV"
     gene            20506..21243
                     /locus_tag="VEV83_10400"
     CDS             20506..21243
                     /locus_tag="VEV83_10400"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HYK45568.1"
                     /translation="MVISDKYKYLFIEMYNTGSTSISNELCEFYDGKRILRKHSRYHE
                     FLKTATEEQKKYFVFSGIRNPMDTVISVYSKFANNHKGKYTDPQQWRKNGGYVKDKRL
                     QLFSDIKNAHLTFQEYFLKYYKVPYDRWSRLDHEKFDYIIRYENIQNDFRTVLQKLNI
                     EPVRDLPTLNKTEGKQDYTNYYTPDIQKRAVFVFGPFMDKWGYSFPDDWNVKRTPLSS
                     TILFSLLGFRRNLIWRQKDKVKELKEV"
     gene            21247..21927
                     /locus_tag="VEV83_10405"
     CDS             21247..21927
                     /locus_tag="VEV83_10405"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK45569.1"
                     /translation="MYLLIVGAPRSGTTLLASMIGMHSDVAMLIEDRWFSIKKLTGKK
                     VLANKLCIPIQLDFTKRATYFTRLMKKLGWYQNYPASKYNMEDYLQLEGLKIIALIRD
                     KDDVINSIMKRGRKEKAIAEKRWQMAMHIMHRLNTEHAQKTVTVSYEDLVSEPENLLK
                     KLSDFIGIDFQPQMLEGYKHNILYPGESGIDKSRAFRSKALNGNGLDKASKSNELYES
                     LMGLRMNP"
     gene            21956..22696
                     /locus_tag="VEV83_10410"
     CDS             21956..22696
                     /locus_tag="VEV83_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45570.1"
                     /translation="MVISRQYKFVFVELPLTATTAISKELREMYDGEPFLHKHATYRR
                     FLRTASPEIKTYTPVSNIRIPLDQAVSMYFKYKNDKELGDLMLTGKNKKQNGTSLRLY
                     LSTRRHKTRAAYVLNNNATFEQYFFKFHRWPYSDWSVLDHKKFEHLIRFEHLAEDYKK
                     VFTTIGVPVRRDLPAANKTPGREKTFWSYYSTDKAKRHAKFIFGPYMRYWGYEFPKEW
                     NNISEPWHAQFLFNLLNIPRKFYWKYLM"
     gene            22707..23792
                     /locus_tag="VEV83_10415"
     CDS             22707..23792
                     /locus_tag="VEV83_10415"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK45571.1"
                     /translation="MKKGRKRFFIFVGGGIGDVLMTTPMFRAIREHYPDAYIGASVMG
                     SPHITILKNNKNVDDVINLGAPEYQGMKGTWRLIRYLRRKRITHSIMNHVAEKKRFFA
                     AAFFAGIRTRLGQDRTSAARERTYKYYVKTLTHSLPYTLDEKLSTQRNLEILRFLGIN
                     NSDITYDLAIPKSDIVSKPGKTCVGIHPGCDGRAELKRWQIEKFVEVAERIRDELDYE
                     VKFYIGPAEADLVPMIKGKFTMIEGMPLADVITDISYCDYFISNDSGLAHISGGFGIP
                     TIMIFGPTLHNEYKLPAAITVENKTLECRPCFHLRRPCPIDKLCLRSVTVNDVFAVFT
                     QVVRDQAKISDGTVKSRNVFQTTEKGN"
BASE COUNT         6847 a         4966 c         5468 g         6660 t
ORIGIN      
        1 atgtttaata caaagcaatg gtactcgttt ttatagatca ctccgacgaa cagataagaa
       61 aatcttcttt tgaagttttg agctacggcg ctgctctcgc tgaaaagttg ggcacatcag
      121 cggcgggttt attgctaggc aacgtatcga ccgatcttac ttcgctgggt aattatggta
      181 tttcggttgt ttaccaggtg aacgatacat ccttaaatca actggacgcg caggtgcaat
      241 cgcaacttgt atcagaggct gcaaaaaaac tgcccgccga cgtaattgtt ttcagccaca
      301 atcaaaccgg aagggcaatt gcaccgcggg tcgccgcccg gttaaaagcc ggacttgttg
      361 ccggcgccgt cgcattacct gatacttcca acgggttcgt cgtgaggaaa aatgttttta
      421 gtggaaaggc attcgccgat gtgtctatca cctctgatat caaggtggtt tcactgaatc
      481 cgaacagctt cccggtcagc acaacgcagg ctgttgcgac agtggaaaag ttgcagttag
      541 aggttcctgc cgctaaggta agagtgacca gtgtaaacaa agtgaaaggt gaagtgcctt
      601 taacggaagc tgagattgtt gtaagcggag gccgcggact aaaaggccct gaaaattggg
      661 cgattgtgga agacctcgca cacgcattac atgcggcaac tgcctgcagc cgcccggttg
      721 ctgactcgca ctggcgaccg caccacgagc acgtgggcca aacgggtatt caaatcgcac
      781 caaatctgta catcgctatt ggtatctctg gcgccataca gcatctcgcg ggagtaaacc
      841 gtagtaaaaa tattgtggtg atcaacaaag atccggaagc tccttttttt aaggcagccg
      901 attatggaat tgtaggagac gcttttgaag tagttccaaa acttacagaa gagattaaga
      961 aaatgagaca atgatattca cgtgcggaaa agagaaaagc ccgggaaatt tttcccgggc
     1021 ttttctcgtt atagatatga gctgctttaa attttaaaat gggagaaggc tttgttggct
     1081 tcggccattc tgtgggtatc ttcttttttc ttgaacgcag caccttcacc tttactcgct
     1141 gctatgatct cattcgctaa tttgtcggcc attgtttttc cattgcgctc ccggctgtaa
     1201 cggataagcc atttcatgct cagggaaatt ttgcgatccg ctcttacttc actggggatc
     1261 tggaatgttg ccccaccgat tctgcggctg cgcacttcca cggcaggtgt gacgttggac
     1321 aatgcttttt tccaaatgtc gtagccgttt tcgcctgtta tcttgctgat cttgtcaacg
     1381 gcatcataaa aaatattgat ggaagtgctc tttttaccct gccacatgag gttgttgata
     1441 aaacgggtaa caagtttatc gttataccgg gcatcgggag ctaatggtaa tttttttgct
     1501 tgtgctttac gcatatctgg taatagttac ttgattattt tttcgccttt tccttttttg
     1561 ttccatattt cgaacggctc tttttccggt ccttaacacc cgctgtatcc aggcttcctc
     1621 ttacaatgtg ataacgaacg ccgggaagat cttttacacg gccaccgcgt ataaggacga
     1681 tcgaatgttc ctggaggtta tgtccttctc cgggtatata agcgatcacc tcgactttat
     1741 tggttaaacg aacttttgca actttgcgca atgcggaatt aggtttcttt ggtgtggttg
     1801 tgtataccct tgtgcaaaca ccacggcgct gcggacagga atctaaagcg cgcgatttgc
     1861 tcttcgccct gatgatctca cgtccctttc taactaactg ttgaattgta ggcattctat
     1921 gaccttaatt tatgtaagcc ccttttttgg gacggcaaag gtaaatgcct cggcaggaaa
     1981 ttccaaaaaa ttgaaatgct aattataaaa tgggcgaaat gactttgatt caccccgaat
     2041 gtcaaacttc aaaccctcaa accttaaaca tccacccata aacatcttcg gctctgcctt
     2101 ccctgatgtc gtttagcttt tgcttgactt ttttagcaag cgaaaacgtg gaagtatcga
     2161 acttcatcac aaggtcttta tatttcaggg cctcaattaa cgagatcact gcggccgtac
     2221 ccattccgaa cacttctttt agattccctt tacggttttc atcaacgatc tcatcaatgc
     2281 ttatcctccg ctctttggtt ttgaccccca tgtcattcag gatcgtaaga acactgtccc
     2341 gggttacacc ttttaaaata gtttcctcaa gtgccggagt tacgaacgta tcattgatca
     2401 caaaacccac gttcatcatt cctacttcgt gtaaccattt atggtcgaac gcatccgtcc
     2461 ataagacctg gtcgtaacct tgttgcttcg caatggtggc gggcaacata cttcctccgt
     2521 agttccctgc attttttgaa aagccgactc ctccgggagc agcgcgggtg tacttttctt
     2581 cgactgcgat cttcatgggc gccgcatgat atgggcctgc agggcttaat atgatcagga
     2641 acttataggt ctccgatggc tttacgccta gcaggttgtc cgttgcaaac atcagcggac
     2701 gaatatataa ggaatgttcc tcctttatcg gtatccagtt cttgtccaat tcgatcaatt
     2761 ggcgcatgcc ctctataaaa atttcctcag agatctcggg catgttcatg cgttgcgcag
     2821 atagattgaa gcgtttgaga ttttcataag gacggaaaat aaatgcatcg cccttttctg
     2881 tgcggaacgc cttcattccc tcgaatatgg actggccata atgaagagca gatgttgacg
     2941 gctccagcag caagggctga tatggcttga tctcaatatt tctccactcg ccattttcaa
     3001 aatccgcttc cagcatgtgg tccgtgaaat attttccgaa gggaatattt tccaggttta
     3061 tatcatgaag cttacttctt tctattttcg ttattatgat ttctgaaaca ccagtcatcg
     3121 catggagatt tgatgcaaag aaaagaaaat ccctgaaaac gatttttcat ttggaggtat
     3181 attcccgctt atgagcgaac aaataaacaa ttttgccctt gcagagctat acagtaaatc
     3241 actggtaata actgatgatt cgcagcctcg cctgccggtg cagccaaaca taacagcatc
     3301 aaaaaataat tttcttggta agtatgaaaa gaagatcatt attgcggtga atgacagtca
     3361 gaatttatac ctcgatgatg agtctcttca attcctcacg ggcatcctta gtgcatgcaa
     3421 actgaatctt gctcatattg cgctcatcaa ttttcaccac gagccgacaa cctttgcaca
     3481 gcttaaaaaa cagatgcagc cggaatacct cctgatgttt ggagtaacgc cggtacaaat
     3541 tgagttgccc tttatcatgc ctgactacaa ggtgcagtct tttgataact gctttttttt
     3601 gacggccccg gcgctgccgg ctctgaatca aaattcggaa cagtcgaaaa aagaaaaagg
     3661 aaagctttgg aatagcctca aaaaaatgtt tgacatcaag tgaaaacgac actcatattt
     3721 gccactaaca ataaacataa aatttacgaa gtatgttcgc ttgtaggaga gcggtttcaa
     3781 gtgatgacgt tgaacgacgc cggaattgat attgatattc ccgagccgca cgacacgatt
     3841 caggcaaacg cctcagaaaa atcccgaaca atttaccagc ttacagggaa aaattgtttt
     3901 gccgaagata cgggcctcga agttcacgca ctcaacggtg cgcccggcgt taaaagcgca
     3961 cggtacgccg gtgaacaaaa aagttttgat gaaaacattg aaaagctttt gctcgaacta
     4021 aaggcgatcg aagatcgcag tgctcagttt aaaaccgtcg tttcgcttat ttggaacggc
     4081 caggaacatt tatttgaagg aataacaaaa gggcagatca tcgttgaaaa aagaggacga
     4141 aatggttttg gctatgatcc ggtttttgtt ccggaaggaa gcgaaaaaac ttttggggaa
     4201 atgagcttag atcaaaaaaa tatttttagc catcgtcgaa aggcgattga caaacttatc
     4261 gggtttctga acgtgagtac ttgatgacaa accgcacgca ttttataaat gatggaaagg
     4321 atcaggatca atttaccgca ggaatttaat ttttcaacgg tcatcaaggt ccgcatcacc
     4381 gacttaaatt atggtggaca tgtagggaat gacagctttc tttccctcgt gcatgaagca
     4441 cggcaacaat tcctgaatca tttcggatac acggagctgg atattgaaca tgtttcgctg
     4501 atcatggctg acgcggcgct cgaatttaaa aaggagttgt cctatcaaga cgaggtaaag
     4561 atctctgttt ctgcaagcgg ttttgacaaa tacggatttg atatttttta caaactggaa
     4621 gttgtaattg aaggtaagtt cgtcttagca ggcaaagcaa agaccggaat gttgtgttac
     4681 gattacaatc aaaagaaatt aatgtccgtt cccgaaaaag taagaagtcg actactgggt
     4741 tagtactgga ttttcaaatt ttcaaattac tgcattttca aattactttt ccatctgctc
     4801 tatcacctct cgcgtaacac cggtgaaact aaaacccccg tcatggaata aattctgcat
     4861 ggttaccatt cgtgcatagt cgctaaaaag aagggtacag tagttcgcgc agtcctcggc
     4921 tgtcgcattg ccgagcggac tcattttttc cgcataatta ataaatccgt caaagccctt
     4981 aacaccactg ccagcggtcg tgcgcgtggg cgactgtgac actgtattca ctcttacttt
     5041 ttttcttacc gcatagtgat aaccgaaact tctcgttaca ctttcgagca gagcctttgc
     5101 gtcagccatt tcgttgtagt caggaaatac gcgctgtgcg gcgatgtagg tgagcgcaac
     5161 aacgctgccc cattcgttca acgcgtccat ctcccaggca gtgcgcaaca cccggtgcag
     5221 gctcatcgaa gaaatatcaa gtgtcttttg attgaagccg taatcaattt cagtataatg
     5281 ttttcctttt ctaacgttaa ggctcattcc tattgaatgt agaatgaaat caacgcctcc
     5341 accgaaatgt ttcatcgatt cttcaaacaa ctttttcaga tcgtccatgt ttaccacatc
     5401 ggcgggaatt acaggcgcgt cattacattc ttttgaaagg ttgtttattt cgcccatgcg
     5461 caatgcaatg ggcgcgttgg taagaacgag ttgtgcgcct tcgttaaaac acgcctttgc
     5521 ggttttccag gcgatgctct gttcgttaag cgctccaaaa atgatccctt tttttccttg
     5581 taataaattg tacataagag tggtttgatg cggtaaaaat aatttgataa tggcttcgat
     5641 tgaaaaaacg gatccgaatt gagatgttca ttatctcccc ttagcgctgg ggcattactg
     5701 ccgcacttac cggtacagaa tgtatcgcat cacttatttc tttgatcagt gatgcgtctt
     5761 tttcaatcgc atttcccacc acaattatgt ctgcgccgct gcggcagttg cggtaagctt
     5821 tttcagcatt tgtgatgccg ccgccaacaa taagaggagt ttcgatatga gaagcgacct
     5881 tttcgatcat tgtcagcgtt atcggatttt ttgcaccgct gcctgcatcc atgaagatca
     5941 gtttcatacc aagcatttcg ccggccatgg ccgtgcacat tgcgatctca tttttgtcgc
     6001 atgggatagg agttgcattt gaaatatagg aaacggtagt tggggccccg ccatcgataa
     6061 ccatatatcc ggttggcatt atctcgaggc cgctctgttt aactacaggc gcgcttatca
     6121 catgctgccc aatcaataat tccggattac gaccggagat aagcgacagg tataaaagtg
     6181 cgtctgcata tgggctcagc tgggagggtg cacccgggaa gatgatcacg ggtatggaac
     6241 acgaaacttt gatttgtcga atgcattcgt cgagattatt agagataaca aggcttcctc
     6301 cgacgaaaaa ataatcaatc cgggcatcta ctgcaagcga caccaattgt tcggtggtgg
     6361 caacatttac tttgtcaggg tcaaccagca ctgcaaatga ttttttgccc gatctctttc
     6421 tttcctgtat ctgattatac aacgtgtgct tcatgccggt tttatagtta tgccttcttg
     6481 caaaaatgca aaaacttttt gattcttaag aattcgttag caatgttttc tgcgctcctt
     6541 accttttcat aaatctctac ctttgacaaa tgtgagcatc atttattaaa acactgtttc
     6601 cgggcagtta gttttcgtca cgattatttt tttaacctgt aatccaatgc tgaattgacc
     6661 tttgaagaaa cacataccta ttttccacag catgtgcata ttcagagttt aaattttcgt
     6721 tctataaaga tattttcgtc tcctgtctct accgactaca acgtcccgaa aaatattgca
     6781 aactcattaa acgaattaaa atggtgaaag aaaaaaccga cgcacttcgc tttcagcgca
     6841 ggtttaccaa agaaggtgtt agtcctttcg aaatgtttga atacgattat cgtaccagtg
     6901 tgataaaaaa tccaactggc gaggtcttgt tcgaaatgaa caacgtggaa gtccctaaac
     6961 aatggagcca gatcgctacc gacattatag cccaaaaata ttttcggaaa gcgggcgtac
     7021 ctcagcttga tggtagcctg ggtagagaaa cctccgcaaa acaggtagcg caccgcatgg
     7081 caaactgctg gaaggtgtgg ggtgaacgct atggctattt taattcggca aaagatgcac
     7141 aggtatttta tgaagagctc gtatacagta ttttgaacca ggcatgtgtg cccaatagtc
     7201 cccagtggtt caatacaggt ttgaatgaaa gttatgggat aacgggaaaa ccgcagggac
     7261 attattttgt agatgcgaaa gacgggcaat tgaaaaaatc aacaagcgct tatgaacgtc
     7321 cgcagccgca tgcttgtttt attttgagtg tgcacgacga cctcgttaac gatggcggca
     7381 tcatggacct ttggatacgg gaagcgcgca tcttcaagta cggatcgggt gtgggaacga
     7441 atttttcccg catcaggagt gaaggagaaa aattaagtgg aggcggcact tcgagcggtt
     7501 taatgagttt tttaaaaata ggagatcgcg cagccggggc cattaagagc ggaggtacta
     7561 cacggcgcgc tgctaagatg gtttgtcttg atctcgatca cccggaagta atgcagttca
     7621 tcaactggaa gatggaggaa gaaaagaaag tcgccgcatt ggttgccgca ggatacgata
     7681 gtagctatga aggcgaggcc tatctcacag tgtccggtca aaactcgaac aactcgatcc
     7741 gcgtaccgaa cgaatttttc aaaacgttgg aagaaaatgg cgattgggag ctaaaagcaa
     7801 ggactgacgg tcgcgtgatg aaaaagatcc cggcacgtga agtatggaac cagatcaatt
     7861 acgcagcctg gcgatgtgcg gacccgggaa ctcaatacga tactacgata aatgaatggc
     7921 acacttgtcc aaagggcggc cggatcaacg catcgaaccc gtgttcagaa tacatgtttc
     7981 tcgataatac tgcatgtaat ttggcaagcg ccaacctcat gaaatttttt gatgttgaaa
     8041 aaaatgtttt cgatgtagaa ggatttgcat acacctgccg gctgtggaca accgtgcttg
     8101 aaatttctgt actgatggcg caattccctt cgaaagaagt tgcgcaactc tcttacgact
     8161 atcgaacact tgggttgggt tttgctaacc tcggcacgat gcttatggtt agcggaatat
     8221 cttacgacag cgaacaggcg cgcgggatag ctggcgccat cacggcgata atgaccggga
     8281 tctcatataa aacatcagca gaacttgcgt cggtgttagg cgcatttcca aagtttgaag
     8341 agaacaggga agatatgctg cgggtgatgc gtaatcaccg tgcggctgct tacgacgctt
     8401 cagatgccta tgaggacctg agtgtaaaac cggtagggat caatgcaaaa tactgtcctg
     8461 attacttatt gtcggcagca tgcaaggcgt gggatgatgc cgttgaactg ggggaaaaat
     8521 tcggttaccg taatgcacaa actacagtga ttgcaccgac cggaacgatt ggcctggtga
     8581 tggattgcga cacgacgggt gttgagccgg attttgctct ggtaaaattc aagaagctcg
     8641 cgggcggtgg ctatttcaaa attattaatc aaagtgttcc tgttgccctt cggcatctcg
     8701 gttatagcga aaaagaaatt gacgcaatag tgaagtatgc agtgggtgcg gcaactttcg
     8761 aaggatcgcc gtctatcaat ccgcaaacat taagcgaaaa gggatttatc gcggaagaaa
     8821 ttcaaaagct gaacaatgct gcaaaagctg cgttcgagat caacttcctg ttcaataaat
     8881 ttattttagg cgaagcttgc ttggagagat taggcttttc agcagaacaa tataatgatt
     8941 ggaatttcga tctgcttacg gcgcttggct ttaatgaaga acagatagaa aaggcaaatg
     9001 attatgtatg cggagcaatg accgttgagg gttcgcccca tctaaagcaa gagcatcttt
     9061 ccgtttttga ctgtgcaaac agatgcggta gaaaaggcga gagatatatt catgcacacg
     9121 gccatatcag gatgatggct gcatgccagc catttttaag tggtgccatc tcaaaaacga
     9181 tcaatcttcc gaacgaagcc tctgttgatg agatagcaga tgcttacatg ttgagctggc
     9241 aattaggcct gaaggcttgt gccttatacc gggatggatc taaattatct cagcctttaa
     9301 gtaacaaatc agacaagaaa agttcccgca ctgacggcaa gaagtccgag gtgcaggaag
     9361 aaaagacggc cacatcaaac gagcctgcgc ccgtaaccat aacacaggaa ccgaatatcg
     9421 ttgatctctc aaaactcaca gcggaggaat tgcttgaaga agttcagaag cgcatgcagg
     9481 caagcaatga tacatcgctt aagcgccaat tatcgaagat cgtcgaacga aagacattgc
     9541 cggcaaagcg tcgtggattt acccagaaag cgaaagtaaa cgggcaggtc atctttcttc
     9601 gtaccggtga gtatggcgac ggaacgatcg gggagatatt tattgatctt gccaaagaag
     9661 gttctacgct gcgaagcctc atgaactgtt ttgctatcgc cgtttcggtt ggattgcaat
     9721 tcggggtgcc cctggaggaa ttcgttgaaa aattcatttt caccaagttc gaaccggctg
     9781 gcatggtgga ccatccaaat atcaagacca cgacttcgct ggttgatttt gtgttccgcg
     9841 cacttgcata cgagtacctt ggccgtacgg acctggtgca tgttattgat aagccggaga
     9901 tcacaaatct gagcgatgag ggcgaagtga atattattgg taagcctgcc ctcagcaaca
     9961 tgcgcgtcat gagtgcgaat agcaccccgc agcctgctcc gcataaattg caaaagacag
    10021 tcgttaaaac agaagccggg cttgatgcga tcaacgctgc agccaagagt atgcaaagcg
    10081 atgcgccttc gtgtaatgta tgtggccaca taaccgtgag gagtggcacc tgctataagt
    10141 gcctcaactg tggaaacagt atgggctgca gttagtatct ttttcaacgg gctgttcttt
    10201 ggggacggcc cgttttttat ttcaatcgga tcctaggcgt aaacgaacga gcgttagcaa
    10261 aatttctaat catcagcagg atgaattatt ttttttataa aggaacggct agcattttta
    10321 aacgtttata ttttaagaaa tttttgtcag cagcgaacaa ataatatttt cgcaccaaat
    10381 ttttgctaaa agcttttatt ggcaaacgaa cacctggaaa aaaagtaaaa atttatgaaa
    10441 gtgaaaaaga cgcggttgcg acgcgggttt attcacaaag gacatctttg ttttctgcta
    10501 acttaaaatt ttggcccact aaacaatctg cgtcacggat aattcatgtt tcgttattta
    10561 tcaatataca aaatagcgtt tgtaaatctg ctcgcagccg gcatgctttt tatctggcga
    10621 actgatgcgt cgcacgtttt ccttaaaatt tccatttgcc tcataaatgc ggcatttctt
    10681 gccgcctcgt ttcacaacat ttcgcggttt gtgaagcgca acgacgcacg acttttcata
    10741 gggcgcaaaa gaacattgat cgttacaatg agttttggct ttctcggtat tatgatcttt
    10801 tccgcctgga acgaatcggg ctcgaggttg atgttcatgg gtgtggccgc atggtcattg
    10861 ctggtaatag tgattcacat ttttgaagat tccatctcgg cgttccttca taaactcttt
    10921 aagcccggcc gacgtatcgc tgttgtcggc tacaacgaca gctcgttaaa gatcgctgag
    10981 aagttcaagc gacgcggaaa ggactttttt tatggtcatt ttgattttga aaacgaaact
    11041 gaaacaatta ccgcagcgcc cggcggattg aaatcatacg tgcagtttgc caggcaaaac
    11101 aacattaccg acttttactt ttccttgcct atgtttgata acgaagaggt agcggtgctt
    11161 attgaggaag cggaaaaaca ttgcatacgc gtgaacttca tcgcgcctga gacgtccccc
    11221 gacgcaggca tgtacagggt gcattatata ggaggactac ctgttttaaa acgttataat
    11281 gaacctttac ggcggcttca taaccagtta ataaaacgaa catttgatgt agttctcagc
    11341 gggcttgtaa ttgtttttat tctctcatgg cttgtgcccc ttgtgagcct attggtgaaa
    11401 atggagagca agggcgcagt tttttttaaa cagcatcgtt ccggccgcgg caataattct
    11461 ttcctttgtt tgaaattcag gagcatgcag gaaaacgcgg tcagtgacat taagcaggcg
    11521 actaaagacg acagccggat cacgaaggtc ggcgcgtttc tccgcaaaac aagcctggac
    11581 gaattcccgc aatttattaa tgttttcaga ggcgatatga gtattgtggg cccgcggccg
    11641 cacatgctca ggcatacaga agaatacaac gaacgcgtaa accattatat ggtgaggtta
    11701 tacctcaaac ccggacttac cgggtgggct caggttaatg gttacagggg ggaaataaaa
    11761 aatatagagt tgatgaagaa aagggtggaa catgatattt ggtacatgga aaactggtct
    11821 cttttcctcg atatcaaaat aatgtacctc acccttgtga acattctaag gggagaggag
    11881 aatgcttact aaattgattt agttcttaac tcctatattt gcgcctcgaa tttttcaaaa
    11941 ccttcatgag ccaatttttt tgctcttgca atttgtagat acaacaggcg ttgttgtaaa
    12001 aaaggatttt ggaagcaatg aaggttctca attacttaaa aattcactga tgacaaacat
    12061 gaagtaccgc tatctatctg cacctgttgt attcttttgt ttcctgttgc ttttcaactc
    12121 ctgcacttct tacaaacatt tttcttactt cgaagattta ccggacaccg ctaagccggt
    12181 gctcgcaacg actgttcctt ttaaagaacc ggtaattgcg aacggcgatt tgttatcgat
    12241 cactattcaa acgatcgaca acgatgtgag cgcattgctg aatagcagct attcagtgaa
    12301 tggtggctca accaatgcac ccgtgcttgg aacttccaca accggaagcg gaacacaggc
    12361 ggttccaaac ggttatctcg tcgacaagaa tggagcggtt acactaccgt ttgtcggcgc
    12421 ggtccaggta agcggaatga ccaccgcgga agcgaaggac gcggtgtcgc gagaggtgaa
    12481 taaatatttt aataacgcag tggtgaatgt gaggtatgct aattttagga tcactgtttt
    12541 aggagaggtg ctgcacccgg cgacctacgt ggtgccaaat gaaaaaataa atctttttga
    12601 tggcctcgca atggccggcg atattactgt ctatggcagg cgtgataatg tcgtgctggt
    12661 gcgcgatacg atcggtcaaa agaaaatagt caggttcaat atgaataata ccgatatcgt
    12721 tagttctcca tggttttatt tgcagccgaa tgatgtgata tacgtgacgc caacgaaggc
    12781 aaagatggcc gccaccgatg cataccgcaa caggagcatc actatattgg ctgctttaat
    12841 tggtttggcg acgttggtgg tatcaaggat tttgtggcat aactaactaa taatttattt
    12901 tctaaattct tttttcatga gcacgaaaat aacaacagct gaggacgctt tcaattttaa
    12961 gaaaattgta tccaggttat tggataactg gaagctattc gcgatatcaa taattgcttt
    13021 cattctactg ggtctttttt atgcctggta tgcaacacct tcttacaatg tgtatgcgca
    13081 gatattgatc caggatgacc aaagttcgaa gtcgtcttcg tccttgctgg gaacagaagg
    13141 tggccttgcc gatttcggcg acttgttcgg cctgcagaca aatgtttaca atgaactcgg
    13201 cattctcaca tcgcacgacc tgcaggaaaa ggttgcaaga aacatgcacc tgaatgtgaa
    13261 atattttatc aagaatggta tcaagacagt cgaactgtat aataagacgc cgtttgtcgt
    13321 aacgtttatt ccaaaaaatg actcaacgct tgcgactacc tgcgatttgg aatttaaaga
    13381 tctgggcaaa aagaatgact ttaagatcag catgagtaac gacctggtgg atactacgtt
    13441 ctccgcaaac tttaatgaca ctgtcaaaac acctgtcggc aagctatact tttcgcgcac
    13501 cgggagagcg tttgaggatg aaccctatca actcactttg acttctatcg atgcggtgct
    13561 tgtcaatatt cccaaggatc ttcttgttga aatttataac ggcgatgcaa ccatattgaa
    13621 tctttcatat aaaactaatg tgccgctgaa aggtgaaaac ttcttaagcg aactcatcag
    13681 cgaatacatg aaacgggatc tgagtgagaa gaatcgtatc tccgacagtt cattgagatt
    13741 tatcaacgac aggatcacga tcgtgaacgg cgaattgaat gcaattgaag agcagatcca
    13801 aaacttcaaa caaactaaca agatagccga cctctccgag caatcgaggg tgctgatcga
    13861 caacacaagt acctacaatc agaaactgga tgaaacggag gtgcagctca atgtagccag
    13921 gtccacatta cagtatatcc tggaccaaaa aaataattcg cggcctgtgc catcactgct
    13981 gaatggcgat ccaacgtttc ttgcgctcgt tcaaaaatat aacacgctgc tgatcgagca
    14041 ggacaggttc tctctttctg tgtcggagaa taacccgctg tcgcaaaatt tatcaacaca
    14101 aatagcaaac ctcaggagtg accttacaaa gagcttacaa agccagataa aaaatcttga
    14161 gataacaaag caaaagatcg aatcagaaaa tgcactgatg cgaaacatgg tcaatgcggt
    14221 tccggtacag gagcgccagt tcgtaagtct cacaagagaa caaagcgtta aacaggcatt
    14281 gtatctctat cttttgcaga agaaagagga aacagcgatt acggaagctg ctacgattcc
    14341 caacgcaaat atcatatcaa ggccaaagtc tgattatcaa aaatccttcc cgcaaacaac
    14401 gctgatactg atcgcaagtg tattcttagg attggtaatg ccgaccggct tcgtgataat
    14461 gaggtatgct ttgaatacgc gcattaacag ccggaatgat atcacagaag ctacatcatg
    14521 caacatactg gctgagatcg gccatgacga taaaggcgca ttgttaccga tgagagaaca
    14581 gagccgcgcg gtgatcgtcg aacagtttcg ggcattccgt accaacatgg gctttttgat
    14641 cggtcagaaa aaatgcccga aagtattgat cacttcgtcg atgagcagtg aaggaaagtc
    14701 atttattgct ggcaatcttg cccagattta ttcgctttca gataagaggg ttttgttgct
    14761 cgagatggac ttcaggaagc ctcacatctc atccatgttt ggattaaaca acaggaacgg
    14821 ccttacgaat tacattgttt ccggtggagg caggatacag gattatatac agcccatcaa
    14881 ggatctgccg aacgtatttg tgcttagttc cgggccggtc cctcctaacg cggccgaatt
    14941 gctgatgaca cctgtggtcg gcaaaatgtt tgacgaatta actgatcttt tcgatcttat
    15001 aattatagat tctcctccaa ttggatttgt tacagatgcg cagttgctaa ccaagtattc
    15061 agacgtgaat ttatttatac tgcgtgaaag gtactctttc aagaacagcc tggaaatagt
    15121 taatgatttg cttgataacg gcaagtttgc aaacatgtac ctcgtggtta acgacgtgcg
    15181 caagagtgcg tcttccaggt atgggtatgg ttacggctat ggttacggct atgggtacgg
    15241 ttatggttat ggttacggtt caaacgggac cacaaaaaag aaaagcaaaa gtcgtcgcaa
    15301 aaagatcctt ggctaaaggt tgattgagaa aaagttgtaa caaaacggtt tcgatgatac
    15361 atatcgagcg attcgtgtcg cctcggcaac gtcaacaggt gccttctgtc tttgttaatt
    15421 gatcggaaac agcactccct gccggcatac atacgaggtt aaataaatga tgcattattg
    15481 catcagtctg tgaaacttaa tttttcaacg atgtgcagca gatcaagatg aggtttaaaa
    15541 cgttaataca tataggctat cataaaactg catcaagctt tttgcaaaaa gaagtttttt
    15601 ccagtgaaaa gcttcctttc aacttgctcg aaagagagtt gatcgtacgt gagatagtga
    15661 aaaaaaattt gttcttcttc gatatcgaaa atgcccgcca ggcgctggta aaaaattttg
    15721 atgcgagcaa agtaaacgtg atctcacttg agaatttggt tggaaatcct cactctggcg
    15781 gatacgcggg ctacgacaat tttctgaaat taaaattgtt gtttcctgat gcaaaaattt
    15841 tcgtttgcat aagggagcaa aacagcatga tcctttcaac ctacaaacaa tacgtgaagt
    15901 catttggcac cctttcgttg aaaagatatc tgcgccagac ggagaaaggt tctaatgtgc
    15961 tacccgcatt cgacctcaaa catttttgct acgatggcct tatcaacact tacaaagagg
    16021 gtttcggaaa ggagaatgtt tttgtattgc cgttcgaact tttaaatact aatgcggaac
    16081 aatttctcgg gcaactattt gaattctccg ggatcagcgc agattgtgtg caggtggtga
    16141 acatgcaaaa aaaacggaag cctgcaatgc ccaattttac gctcagtgtg aaaaggagat
    16201 acaatagggt ctttacgcgc acgcgtctaa accctcacgg gtggtttgcc ttctcaacac
    16261 aaacagacac gttcccgttt aaagcgatag ccttcctgga acgcaaattg ggaaaggagt
    16321 ttcagaaaaa aagcgacaaa aagcaacagc gtatcattga aaaggcagta tctgattttt
    16381 acggtgaaag taaccgaaga actatcgact tgattaatgt ggatctcaaa acatacaatt
    16441 ataactgtaa cggcctgaat gaatcaaaga gaaacaatga gtgaccagcc ggttttcgtg
    16501 ttgggttgca gcaaatcggg aacatcattg ttgcgcaacc tgtttgacgg gcatcccgcg
    16561 gtatttgcag caccgctgga atcccatttt tttcaacata ccggttcatg ggtcagctat
    16621 tttttcagac ggtcgaatcc aaggaggctc acgatcgagc aaatgaaaaa tgagttggtg
    16681 tcgtggatcg atttttcaaa ccgcagagta aatcttttcg cagacggttt tactgcaggc
    16741 aaatgggacc tggaaaaatt taaggaaaca atgttttcga aacaggtatc cggtttaaga
    16801 gaattatcgg acttgtatat cgaaagcatg tacgtgtcgc tttacgataa accttatccg
    16861 ggactcattt tcgtggagaa atctgtggag aatgttgagt tcgtccagga gtggctgaag
    16921 ttatacccta atgcaaaatt tgtccatatt ctgcgtaacc catactcgaa tttagtcgct
    16981 atcaggaagt tcatgcattc agtaagagtt ccatttctta atcgcgcatt ggtaagtatg
    17041 cagcaatcat attatttcct gtataagaat cttacactta tcaaccctgc gcagtataaa
    17101 gtgatattat acgaagacct cctgaatgat ccgaacaaga taatgactga actcgcaaat
    17161 tttgccggga ttgacttcga agacattttg ctaacaccca caatttcgcg ggaaacgtgg
    17221 agcgggaaca gtacgaaccg gacaaacttt acgggcgtat caaatcaaaa tattgaaaag
    17281 tggaaagacg aaataaccag gtatgaaatt tttgtggtta ataaattgtt tgatcacgtg
    17341 ttgaccgatt ttaagttcga aaaaatttcg cccgaccacg tgaagaagag tttgcttccg
    17401 aaagaagggc ttttcaatta tgcgatgaat aagatctcat actattattt gccaaagcca
    17461 aatgaccgta tgacggatga acaacgcaaa aaatcaaagg aaagattttt tgtgcaggac
    17521 ggcatgaacg gttccgataa aaagctttaa atataaacag tacaattcga gcgtagatgt
    17581 cgaacattaa aacaatatta agccagtcag taaagatgac cttttactgg gtgcttagtg
    17641 tttcgcttgg ttttgtaagc aaccttgtat atacccgctt tctaaatcca gatatcttcg
    17701 gcaactttgc cctgacaagg acgcttgtca cttttttgcc gctcctgagc ttgtttggtt
    17761 tgcacaaagg attgttgcgc cagggatcca tcgcgctggg acgagaaaac gaaggcttgt
    17821 ataaccagat acgcaactat acaatatcgg ttgcgatgat catcggcttc tccgttggat
    17881 tcattacgct cgtaggcgcc gacattattg cggcagactt tttcaaaaaa ccggagctgg
    17941 ctacgcaaat aagatttttc agttttgtta ttcccacgct cgttaccagc aacatggtaa
    18001 tgtcgttata ccaggtcaac aagatggccg acaccggcca gttcctatac caggtcgttc
    18061 tattttctgt gctgcttatc atattcctgc tctttacttt atttatgaag ggagagcctt
    18121 taatcacgtg gagttttttc gcagggcatg ttatttattt tctactgttg ttacattacc
    18181 agcgaaagct cggctacagg ttttcagtta agatcgataa gtcggagcga aagtcgatat
    18241 acaatatttc gtttccgcaa tttttgtctg ccatgttcaa ccaatcgcag aaatggagcg
    18301 atacttttct gcttggcata ttgggtacaa gcaggcaagt gggcatctat tacatcggct
    18361 tgcgtattgc cggatttatt tctattcccg ccgctgcaat gagtaccatc tttatgccga
    18421 tcgctgcgcg cctcatcggg cagaagaaga atgatgagtt gaatgattta tataaaacag
    18481 tgacgcgtgt tgtgtttgtt tgcggaacac ttggttttgg tgcagtattc tttttgaaag
    18541 actatctgat tgctcttttc ggaaaaggat atcaggcttc cgcggcggtg atcattgtaa
    18601 ttttggtgag cgaaacgatt gatttcggag tcgggccggc gcgacaattg ataaccatgt
    18661 caggtggcgg ccggataaac atgatcaatt cgatattaac gctaacgata gatattacgg
    18721 cgtcgtttct acttataccg aaatatggga tcatgggtgc cgccatcgca aacgcattta
    18781 caaacatcgt tttacaaatc gtcactgttg ttgaattgat ggtgatctat aaattatcgc
    18841 cgttcagcaa agagtatttt attgaagcgt ctttatttgt tggctgtatt ctgggaacgg
    18901 tgtttctgcc tttgcctaac cttgtgaagt tggctattta ccttgttgtg ctgagcacac
    18961 tatatctcac aataactttg ggtaaaaaag aaaggcagaa gatcagagca ttgatatcgg
    19021 aaaagcgaaa gaaaaaaagg tttcgtgtag aggcagacca ggaggcgtag ttttataatc
    19081 cgaaacgtta tcagttttat ggaacaagtt ttaagaccga atttaacaga atacaggcgg
    19141 gtacccaata tgccggtgtt tctgctgctg ctgtttttta tcccggaagt aacgatacga
    19201 atgcacacgt tcataagcgc gggaggtgtt cctttggcat ttgcagaacc gatcttcttc
    19261 gtttccttcg cgcttttgat attggacaaa tgggacctca acaaggtgtt tgccagctct
    19321 ttcagcaaat actattttat tttccttgct tacggcatct ggaatttaac gatgagcctg
    19381 aaatattacc acaatggtat tggcttcgct ggcagcgttt ttctgaacgt atttgtttac
    19441 ccgctttctt ttttcctggg ttatcattac atcactgaac aaaaacaact caagaattat
    19501 ctaaggatga cgcagataat ttttttcttg tacattcctt tgacctttgt atatcaccag
    19561 ttgggagtag gagagaaggc cccttacctg caatttttcg atcactacga ggggtgggtc
    19621 gtgtcgttcc tcatttattt tgcgctcagc aactatttta tttataaaaa agtaagttgg
    19681 tttagcaagt tcctcgcatt tggttcgatt atcattataa tcctgtgtaa ccgaagggga
    19741 atttggatct cgacgttttt tacctgtttt ataatttatt acgtgagcgt tcggcagatc
    19801 tcttttgggt atcttgcccg gatcctctta tgggtgggcc tcggcgtcgg cacatatatt
    19861 ttgatcgtta aagttgcgcc gaacaacccg gtcgtagagg ctgttaattc acgtgtgata
    19921 caaacgattg aaaacttcga aaatccaacg gaatttggtg ataactcaat tgcctggcga
    19981 ttacttgttg tacaggcaag cttcaaagat tttactgagc atcccatctt agggcggggt
    20041 attggctatc agccaacagt tgttttccct aaaggaactg atctatggaa tgagcgcgaa
    20101 ggcgtcgcgt ttcacgacat tgttatagcc cttttggtga caaccggcgt cctcggactg
    20161 atattgtttt tcataatgca tctgaaattc atttttcgat tcctgatcga aaagaatgag
    20221 atcaagggtg agatcaagcc ctatgttgcg tccatgtttg gtatgtatgc tggtgccctg
    20281 atgtgggcat tcgtcgcaaa cgatatgtgg tcaaatgcga atttggttat aataatatat
    20341 gcgctgcgcg gcgccgtagt aaagcaatta gataaggcta tcgaagaaaa aaagaaactg
    20401 gccgctgcgg aagtcccaca aaatttaaac cttcaggctg tatgataaac caatttatca
    20461 aaaaactgcc tggggcattt gattggtgaa ccttaattga aatgtatggt tatttctgat
    20521 aagtataagt atttgtttat cgaaatgtat aatactggct ctacgtcgat cagcaatgag
    20581 ttatgcgaat tctacgacgg taaaagaata cttagaaagc attcgcgtta ccatgaattt
    20641 ttgaaaaccg ccacggaaga gcaaaaaaaa tattttgttt tttccggcat aagaaacccg
    20701 atggacactg tgatcagtgt ttattccaag tttgccaaca atcataaagg caaatacacg
    20761 gacccgcagc agtggagaaa aaacggcggt tatgttaagg ataaaaggtt gcaattgttt
    20821 tccgatatta aaaatgctca cttgaccttc caggagtatt ttctaaaata ctataaagta
    20881 ccctatgaca ggtggagccg gctagaccac gagaagtttg attatatcat ccgttatgag
    20941 aatatccaaa atgatttccg taccgtgttg cagaaattga atattgaacc ggtaagagat
    21001 ctgccaacgt taaacaagac agaaggaaaa caagactata caaattatta tactccggac
    21061 atacaaaaaa gggccgtttt cgtttttgga ccatttatgg ataaatgggg atattctttt
    21121 cccgatgatt ggaatgtgaa aaggacaccg ctaagttcca ccattctctt tagcctgtta
    21181 ggctttaggc gaaacctgat ctggaggcaa aaggataaag taaaagaatt aaaggaagtt
    21241 taaaatatgt atttgctaat cgtcggcgct cccaggtctg gcactacttt acttgcatcc
    21301 atgataggta tgcattctga cgtcgcgatg ctgatcgaag acaggtggtt ttctataaaa
    21361 aagttgactg gcaaaaaagt actggctaac aaattatgca ttcctataca gctcgacttc
    21421 actaaaagag cgacgtattt tacacgattg atgaagaagc ttggctggta ccagaattac
    21481 cctgcgtcga aatacaacat ggaggactac ctgcaactcg aggggcttaa gatcatagcg
    21541 ttgatccgtg ataaagatga tgtgattaat tccatcatga agcgtggcag gaaagaaaaa
    21601 gcgatcgccg aaaaaagatg gcagatggcg atgcacatca tgcataggtt aaatacagag
    21661 cacgcacaaa aaaccgtcac cgtctcctac gaggacctgg tgagcgagcc cgagaattta
    21721 ctaaaaaagc tttcagattt tataggaata gattttcaac cgcagatgct ggaagggtac
    21781 aagcataata ttttgtaccc gggcgaaagt ggcatcgaca aatcaagagc gttcagatca
    21841 aaagcgctga acggtaacgg tcttgacaaa gcatcaaaat caaacgagtt atatgaaagc
    21901 ctcatgggtt taagaatgaa tccttaataa agtgtagttt tatttttgtg tttgtatggt
    21961 aatcagtcgt cagtacaagt ttgtttttgt tgagttgccc ctaaccgcga ctactgctat
    22021 ctcgaaggag ttgcgcgaaa tgtatgatgg ggaaccgttt ttacacaagc acgcaactta
    22081 tcgccggttt ttgagaactg cttcccccga aataaaaaca tatacgccgg taagtaacat
    22141 aagaattcct ttggaccagg cggtgagcat gtattttaaa tacaagaatg ataaggaact
    22201 gggcgacctg atgctcacgg gaaaaaataa gaaacaaaac ggaacgtcgt tacgtttata
    22261 tctttcgacg cgaaggcaca aaacgcgcgc ggcttatgtt ttgaataaca acgcaacgtt
    22321 cgaacaatat ttctttaagt ttcatagatg gccttacagc gactggagtg tccttgacca
    22381 taaaaaattt gaacatctca tcaggtttga gcacctggct gaagattata aaaaagtgtt
    22441 cactactatt ggcgttcctg tgaggagaga tttgcccgcg gccaataaaa cgccgggcag
    22501 agagaaaacg ttttggagct actactctac ggacaaagcg aaacgacatg caaaattcat
    22561 ttttggcccc tatatgcggt actggggtta tgaatttccg aaggagtgga acaatatcag
    22621 tgaaccatgg catgctcagt tcttatttaa tttgctcaat attccgcgaa aattttattg
    22681 gaaatattta atgtaaaaga taatcattga aaaaggggcg caagagattc ttcatatttg
    22741 ttggcggagg tataggtgat gtgctgatga caacaccaat gttccgggcg atcagggaac
    22801 attaccctga cgcgtatatc ggtgcatccg tgatgggaag cccacacata acgatcttaa
    22861 agaacaataa aaacgttgat gatgtgatca acctgggagc gccggaatac caggggatga
    22921 aaggtacatg gaggttgata cgatacctgc ggcggaagcg catcactcat tcgatcatga
    22981 atcatgtcgc agagaaaaag cgattcttcg cagctgcttt ttttgcggga ataagaacga
    23041 ggctcgggca ggaccgcacg tcggctgcac gggaacgcac ctacaaatat tacgtaaaga
    23101 cgcttactca ttcattgccc tacacgcttg acgaaaaatt aagcacgcaa cgcaatcttg
    23161 aaatattgcg atttctcggg atcaataatt ctgacattac ctatgacctg gcgattccaa
    23221 aaagcgatat tgtttcgaaa ccgggtaaaa catgcgttgg aattcacccg ggatgtgatg
    23281 gacgtgctga actgaagagg tggcagatcg aaaaatttgt tgaggttgct gaaagaattc
    23341 gcgacgagct tgactacgag gtgaaattct acatcggacc cgccgaagct gaccttgtgc
    23401 cgatgatcaa aggaaaattt accatgatcg aaggaatgcc gttggccgat gtgataactg
    23461 atatcagtta ttgcgattat tttatcagca acgacagcgg gcttgctcac atttcaggag
    23521 gttttggtat tccaacgatc atgatctttg gcccgacgct tcacaatgaa tataaattac
    23581 cggctgcaat aacggtagaa aataaaaccc ttgaatgcag gccatgtttt catttaagaa
    23641 gaccatgccc gatcgataaa ctttgcctgc ggagtgttac ggtgaacgat gtattcgctg
    23701 tgtttacgca ggtcgttcgt gaccaggcca aaatttcgga tggaacggta aaaagccgaa
    23761 acgtttttca aacaacagaa aagggtaact aaatgctttg taacacggtg tcgctgtcaa
    23821 actctcttat caggtgagtg gtttgcgcaa tgttagcctt agaagatgcg ccgaataaga
    23881 tcgacgagat atttggtaac gagcaaacgt acttgattgc ttcttttgga ttgattgcac
    23941 c
//
LOCUS       DASQJI010000369         4565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2806439,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000369 DASQJI010000000
VERSION     DASQJI010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4565
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2806439"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1178
                     /locus_tag="VEV83_10420"
     CDS             186..1178
                     /locus_tag="VEV83_10420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45572.1"
                     /translation="MINAIQQTKRPGWFSEPKNVATTVVGLSLFAGIAYGFITYVLPW
                     LITVTWSLINLIIGGAILGFILMVITNKKFWRALRYFSEFIANYTIGVAIELNPFRIL
                     QMKIDQGYKDRETLFRQSARLKGKQSELVDKLNEKEKELQLNVQKVKILQQEKRNLKQ
                     IDLYANSVLRCREYIDNVTPIVGDLNKLIKFSEAAYEESGIMLEDAKLDLEAKRDLYY
                     SVTTGLSAVTSAMKAFKGDDDLNQDAEKALSILKQQIGEKIGNIKSAIDVTQRFMDDK
                     VLEDKAKSAQAIELINNFNLNTDFNYTNRSLDNNKDNGKLQGVTISDRYRGLLD"
     gene            1343..3109
                     /locus_tag="VEV83_10425"
     CDS             1343..3109
                     /locus_tag="VEV83_10425"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK45573.1"
                     /translation="MAIKLKPAGKLLIIGSVVAAGILSIRWYQGRPKMVTQSMELGTV
                     TLPDAPEASLTDNAVMLPIPSNQQAVNGGLQITWERMAWNSQFSGMYANGGVRTTKGS
                     LFDKAHLDVTYVRQDDCTKQMADLVKFANDYKNNPNATAVLITFMGDGMPAFMTSLSK
                     ELEPLGAEYQPIIIPVAHGKSYGEDQVMAPPSWKQDPHNGIGKCVAGVLRDGDVNILL
                     KWAGDNGLKINPDETTYDADAINIIAASDFLDAPNKYITGYTEKRKIVVNGKTTGRDT
                     TVGVDGVATWTPGDVNVATKKGGLVTIANTKQYASQMPNQTIAIKKWAYDHRTDIENM
                     IVALAEAGDQVRSFNEAKKFAAKVSADVYQEKDADYWLRYYNGIEEKDIQGLKVNLGG
                     STVFNLADMANTFGLGDDKVDRYKAVYNTFGNLMVKMYPSLMPTFMPYEKAVDKSFLY
                     SVISNHPELLQGKAIETNYAAEITSEVSSKSYSIEFESGSANIRPSSYKLLDEIFESA
                     VVAEGLKIGVYGHTDNVGNDAINTPLSEQRADAVRSYLLKKGLKENRMEAKGFGSTKP
                     IADNNSEAGRSKNRRVEIVLGE"
     gene            3224..4057
                     /locus_tag="VEV83_10430"
     CDS             3224..4057
                     /locus_tag="VEV83_10430"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYK45574.1"
                     /translation="MKTKIKSKPFYNSPLGIGSVLFQPFGNISKQTFMIMIGLQVVIA
                     ITAWQFSSVGLIPKPGHVATAFGQLLTSRLLIDNMLVSLALTLKAMLYSIIITLFFAY
                     ASVMPFFKSMAQFIVKCRYLTLTGLIFIFTLLTKDGSELKLSLLVFGIVPFFTTSFLS
                     VILNIDNQEYELCKTLGYNNWQTLYEVIIVGKADQVFEILRQNFAIAWMMITMVEGLN
                     MSEGGIGSLLIKYNKYNDLTHVIALQLVIFLIGICFDYLLGTTRHWLFPHSKLKQEVA
                     S"
     gene            4054..>4565
                     /locus_tag="VEV83_10435"
     CDS             4054..>4565
                     /locus_tag="VEV83_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK45575.1"
                     /translation="MTTCIKTNTLLKAENIQLVYDDKLILRDINFCIRDIVRPGMQQG
                     QVISLVGKSGIGKTQLFKILSGLQKPTCGSVTINNKQVVRAGDMGVIFQNYYLFEWRT
                     VFHSLLLAARQNSELKDKEKETINEYASKFNLEEELQKYPQQLSGGQRQRASIIQQLL
                     KGSDFLLLDEP"
BASE COUNT         1440 a          928 c         1052 g         1145 t
ORIGIN      
        1 tgttcgacat cgaaaaaatt aaacagttta taacgtgaca tgtgacaggt gagagatgag
       61 aggcaatgcg tcgcagatgc ctgcttgcac ggcatcactg ttctttcatt ctgaacgaat
      121 gcgaatcttc aatgtaaaaa ataataagca aagcgattct ataacaaaca aaaacaaaaa
      181 ataaaatgat caacgcaatt caacaaacga aaaggccagg ctggttttct gaaccgaaga
      241 atgtggcaac aacggtagtt ggcttgtcac tctttgccgg aattgcatac ggttttataa
      301 cgtatgtatt gccctggctg ataacagtta cgtggagtct tatcaattta attattggtg
      361 gcgctatact gggatttatc ttgatggtca tcacgaataa aaaattctgg agagcactgc
      421 gttatttttc tgaattcatc gcgaactata caattggtgt agctatcgag ctgaacccat
      481 tcagaatcct gcaaatgaaa attgaccagg gttacaaaga cagggaaaca ttatttcgtc
      541 aatctgccag gctaaaaggg aaacaaagtg aactggtaga taagctgaat gaaaaagaaa
      601 aagaactgca gctgaacgtt caaaaggtaa agatcctgca acaggagaaa cgaaatttaa
      661 aacaaatcga cctgtatgca aacagtgtac tgcgttgccg tgaatatatc gacaatgtga
      721 cacctatcgt tggcgatcta aacaagttga tcaaattctc agaggccgca tatgaagaaa
      781 gcggcatcat gctcgaagat gcgaagcttg acctcgaagc aaaacgtgac ctgtattatt
      841 cagtgaccac aggtttatcg gcggtaacaa gcgcgatgaa agcgttcaaa ggtgatgacg
      901 acctgaacca ggatgctgaa aaagctttgt ccatccttaa gcaacagatc ggtgaaaaaa
      961 taggcaacat aaaatccgcg atcgatgtaa cacaaagatt tatggatgac aaggtgctcg
     1021 aggataaagc aaagtcagcg caggcaattg agctcatcaa caatttcaac ttgaacactg
     1081 atttcaatta tacgaacagg tctctcgaca acaacaaaga caatggaaaa ttacaaggcg
     1141 taacgatcag cgacaggtac cggggcctgc tcgattagac ttttcaatca acgttttatt
     1201 tctcgcaacc tccgctcagc cgaatagaat taccggacgt ataagagtgc gacgcaacgg
     1261 ctgctgaaca agggccagca gccgggtttc aaaatattgc ccttaacgaa acaattttta
     1321 cacacaaata aaacatacaa ctatggcaat caaattaaaa cccgcaggta aattactgat
     1381 cataggatcc gtagtagctg ccggcatatt aagtatcagg tggtaccagg gccgccctaa
     1441 aatggtgact caatcaatgg aattaggaac cgtaacatta ccggatgcac cagaagcgtc
     1501 attaaccgat aacgccgtaa tgctgcctat tccatcaaat caacaggccg tgaatggcgg
     1561 tttgcaaatc acctgggaac gcatggcatg gaacagccag ttttcaggca tgtatgcgaa
     1621 cggtggcgta cgcacaacaa aagggtcgtt gttcgacaaa gctcatcttg atgtcacata
     1681 tgtgcgccag gacgattgca ccaaacaaat ggcagatctc gtaaagtttg cgaacgatta
     1741 taaaaataat ccgaacgcaa cggcagtgct tatcacgttc atgggcgatg gcatgcctgc
     1801 tttcatgacg agtttgtcga aagaactaga accgttaggt gcagaatatc agccgatcat
     1861 tataccggtt gctcatggca aatcttatgg tgaagatcag gtgatggcgc ctccatcctg
     1921 gaagcaggat cctcacaacg ggatcgggaa atgtgtagct ggtgttttgc gcgatggcga
     1981 tgtcaacatc ttattgaaat gggccggcga caacggttta aaaataaatc cggatgaaac
     2041 aacatacgac gcagatgcga tcaacatcat cgctgccagc gactttctcg atgcgcccaa
     2101 caagtacatt acaggttaca ctgaaaaaag aaagatcgtc gtcaatggta aaacaacagg
     2161 acgcgatacg accgttggtg ttgatggggt tgcaacatgg actcccggcg atgtaaacgt
     2221 tgccacaaaa aaaggtggtc ttgttacgat cgcgaatacg aaacaatacg cctcgcaaat
     2281 gcctaatcaa acgattgcca tcaaaaagtg ggcatatgat cacagaacag atattgagaa
     2341 catgatcgtt gctcttgcgg aagctggaga ccaggtgcgt tcttttaatg aagcgaagaa
     2401 gtttgcagca aaagttagtg ccgatgtata ccaggagaag gatgctgatt actggctgag
     2461 atactacaac ggtattgaag aaaaagacat tcagggcctg aaggtgaatc ttggtggttc
     2521 gactgtgttt aatctcgcgg atatggccaa tacttttggc ctgggtgatg ataaagtaga
     2581 ccgttacaaa gctgtttaca acacattcgg gaacctgatg gtaaagatgt acccgtcatt
     2641 gatgccaaca tttatgcctt atgaaaaggc agtcgataaa agctttttgt acagcgtcat
     2701 ctctaatcat cctgagctgt tgcagggcaa ggccatcgaa acaaattatg ccgcagaaat
     2761 tacttcagaa gtttcttcga agagttacag catagaattc gaaagcggct ctgccaatat
     2821 caggccatcc tcatacaaac tgctcgatga aatttttgaa tcggcagtcg ttgctgaagg
     2881 tttgaagatc ggcgtatatg gtcacaccga taacgtaggt aacgatgcaa tcaacacgcc
     2941 attgtctgaa caacgtgcag atgctgtaag aagttatctc ctcaaaaaag gcttgaaaga
     3001 aaatcgtatg gaagcaaagg gttttggaag cacgaagccg atcgctgata acaattcaga
     3061 agcggggcga agcaagaatc gccgcgtgga aattgtgctg ggggaatgat gcccccgtcc
     3121 cctaaagggg agaaaaggga tttggctcca tggttcgagg ttaccagtta aatagattta
     3181 agagaccttt tgaagatgca tcatagaata aatcacaatg agaatgaaaa cgaagattaa
     3241 atctaaaccg ttctacaact cccctttagg gattgggagc gtcctctttc aaccgtttgg
     3301 aaacattagt aagcaaacgt tcatgatcat gatcgggttg caggttgtga tcgcgatcac
     3361 tgcgtggcaa ttttcttctg ttggtttgat ccctaaaccc ggacacgtag caactgcctt
     3421 cgggcagttg cttacatccc gcttgctgat cgataatatg ctcgtgagcc tggcacttac
     3481 attaaaagca atgctttatt ccatcatcat cacacttttc tttgcttatg catcggtgat
     3541 gccgtttttt aaaagcatgg cgcagttcat cgtgaagtgc aggtacttaa ccttgactgg
     3601 tttgatcttt attttcacgt tgcttaccaa agatggaagt gaattaaaat tgtcgcttct
     3661 tgtgtttggt atcgttccct tctttaccac ttcatttctt tcggttattc tcaatataga
     3721 taaccaggaa tacgaattgt gcaagaccct tggatataac aactggcaaa cattgtatga
     3781 agtgatcatc gtcggcaaag cagaccaggt gttcgagata ctgcgtcaaa actttgcgat
     3841 cgcgtggatg atgatcacca tggtggaagg attgaacatg agcgaaggcg gtattggatc
     3901 gttgcttatc aaatacaaca agtacaacga ccttacgcac gtaatcgcgc tgcagttggt
     3961 gatctttctc atcggtatat gctttgacta tttactcgga acaacgcgac attggttatt
     4021 tcctcacagt aaattaaaac aggaggtggc atcatgacaa cctgtattaa gacgaacact
     4081 ttattaaaag ctgaaaatat tcaactggtt tacgacgata agctcatcct tcgcgacata
     4141 aacttttgta ttagggacat tgtacgaccg ggtatgcagc agggacaggt tatttcgctc
     4201 gttggcaaaa gcgggattgg taagacgcaa ttgtttaaga tattgtcggg tttgcaaaaa
     4261 ccaacatgcg gctctgtaac gataaacaac aaacaagttg ttcgcgccgg cgacatggga
     4321 gtgatatttc agaattacta cctgtttgaa tggagaacgg tgtttcattc cctgctgtta
     4381 gcagccaggc aaaacagcga actgaaggat aaagaaaaag aaacgatcaa tgaatatgca
     4441 tcaaaattta atcttgagga ggagttgcag aaatatccgc aacaactgtc cggcggacaa
     4501 aggcagcgtg cgagcatcat tcaacaatta ttaaaaggtt ccgatttctt attgctcgat
     4561 gaacc
//
LOCUS       DASQJI010000370         5368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_963384,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000370 DASQJI010000000
VERSION     DASQJI010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5368
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963384"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1267)
                     /locus_tag="VEV83_10440"
     CDS             complement(23..1267)
                     /locus_tag="VEV83_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HYK45576.1"
                     /translation="MDPKNLMIAEFDYHLPDEKIAKYPAENRDTSRLLIYQNAAIRED
                     VFSNLSAYLPPDSLLVFNNTKVVEARLLFKKSSGTTIEIFCLEPVEPHTDITSAMLGT
                     SRAQWKCLVGNAKKWKAESLSKKLVIGGKEIRFSATKKGKYADVFVIEFAWNDHNITF
                     AEILHAAGVIPLPPYLHREARKEDSSNYQTVYAKQPGSVAAPTAGLHFTERLMRQLRQ
                     QKIELDFVTLHVGAGTFMPVKSATLGEHSMHAEYFEVSRKLIERLSKNLNESIVAVGT
                     TTLRTIESLYWMGSKLVDHLKKRSAGNIMTGDISVEQWEPYELHSPCKVSDALEALLF
                     WMNENEMEKMVAQTQIIIAPPYKLKIAKALITNFHQPKSTLLLLVAAVTSNQWRDIYE
                     YALNHDFRFLSYGDACLFFSEM"
     gene            1480..1935
                     /gene="mraZ"
                     /locus_tag="VEV83_10445"
     CDS             1480..1935
                     /gene="mraZ"
                     /locus_tag="VEV83_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HYK45577.1"
                     /translation="MAGFLGEYEATIDGKGRFLLPGGLKKQMPEGTQTIVISRGFEKC
                     LLLYPLNTWEAIEEKIKKLNDFNPKVSQFRTLFVGGASYVDLDSAGRVLLPPSLKEYA
                     GLNKDIVLASDIDKVKIWDSGKYKKLFEDFSSDAFAKLASEVMSNTSNA"
     gene            1939..2883
                     /gene="rsmH"
                     /locus_tag="VEV83_10450"
     CDS             1939..2883
                     /gene="rsmH"
                     /locus_tag="VEV83_10450"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HYK45578.1"
                     /translation="MSDEAHNSKAGEPGYHVPVLFHEAIEALNIQPRGVYVDCTLGGG
                     GHSNGILDKLDESGRLIAFDQDADAQKNLPNDHRVTFLPYNFRHLQRLLRLHKQSKVN
                     GVLADLGVSSFQFDNAERGFSTRFNGPLDMRMDKRTTTTALDILTEYDESDLHRLFER
                     YGEVPNAKTLARYIVQNRKLSSLKDTVSFKTFLAPVVKGNPNKYLAQVFQALRIQVND
                     ELGALDEMLAQLPDVLLPGGRAVIITFHSLEDRLVKNFFRRINEIQDENNPFSTVKKS
                     PVFKVLSKKPIVPSAEEIKKNPRARSAKLRVAEKLHED"
     gene            2962..3288
                     /locus_tag="VEV83_10455"
     CDS             2962..3288
                     /locus_tag="VEV83_10455"
                     /inference="COORDINATES: protein motif:HMM:NF039650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsL-like putative cell division protein"
                     /protein_id="HYK45579.1"
                     /translation="MNITNSKNKLKTAVHYSWVVRHFSFLVFLALLAVIYIANGHWSD
                     NTIRDINVTAKQVKDMQYEYKNLKSLEMYKSRESQVTQAAAQLGLKPSAEPPVELEVA
                     GSTAGH"
     gene            3344..>5368
                     /locus_tag="VEV83_10460"
     CDS             3344..>5368
                     /locus_tag="VEV83_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HYK45580.1"
                     /translation="MEIKKDILWRVYLCFIVIAALCLVVITKAFYIQQVQGSYWRSMS
                     DSLHTRIEEIDAERGTIYSEDGQMLSTSIPQFDIYVDFQADGLKENNGQLFKDNVDSL
                     SICLAGLFKDRTGNEYQSILNKGYRNRNRYFLLKKKVSFDQYQQLKQFPLVRLGRNKS
                     GFIAEVQNIRLNPYQLLAFRTIGLERQNAQKVGLEQTYDTLLKGTTGKRLVRYIAGGV
                     AVPVDEDYEIEPKNGKDIVTTLDSRIQEITENALMKMMVSNQAEHGCAVVMEVKTGKI
                     KAIANLGRQADGSYWEDFNYAMTPTEPGSTFKLATLLSVLQDKKYSLNTNVNLQGGVW
                     QINGRTVYDAEKHGQTNVPVKRAFELSSNVGMAKLAYSSYASNPSQFINHLKALHLDS
                     ATGIDLYGERPPFVDHPGSKYWSATTLPWMAFGYNVLITPLHTCMLYNAVANNGVMMK
                     PYLLNDVMQDGIIVSQKNPTAIEKICDDTVLQQLKECLRGVCSDPGSTAYNLFKGTPY
                     AVAGKTGTALVADGRNGYGTGIYQSSFAGYFPAEDPQYTCVVVIKNKPHAPMFYGALV
                     AGPVFKEIADRLITLNAPQNDSSKYALLKNVDSSYYSFSGSENDLKMILSATEVHYRD
                     SSKTEWTRLAKQQSSAVLSSVPVSNKVMPSLNGMGLKDALYICENAGLVVK"
BASE COUNT         1578 a         1149 c         1212 g         1429 t
ORIGIN      
        1 cttgctgagg cgtaaacacg gttcacattt ccgaaaaaaa taaacacgcg tctccatagc
       61 tcagaaaacg aaaatcgtga ttcaacgcgt attcataaat gtctctccat tgattgcttg
      121 ttaccgcagc taccagtaac aacaaagtcg actttggctg atgaaaattt gtgatcagcg
      181 cttttgcgat ctttaattta tatgggggtg caattatgat ttgcgtttgt gctaccattt
      241 tttccatttc attttcattc atccaaaaca acaatgcctc taaggcgtcg gaaactttgc
      301 acggactatg cagctcataa ggttcccatt gttcaactga aatgtctcct gtcataatat
      361 tgccggcgct tctctttttt agatgatcca ccaatttact tcccatccaa tataaacttt
      421 caatggtgcg taaagttgta gtgccgactg caacaatact ctcgtttagg ttttttgaca
      481 gacgctcaat caacttcctg ctcacttcaa aatattcagc atgcatcgaa tgttcaccca
      541 gcgtggccga ttttacgggc atgaacgttc cggctcccac gtgcagcgtt acaaagtcca
      601 gttcaatttt ctgctgcctt aactgcctca ttaatcgttc tgtgaaatga agccctgctg
      661 tgggagcagc aacagaacca ggttgcttcg catacacagt ttggtaattt gaactgtctt
      721 ctttgcgtgc ttcgcgatgc agataaggcg gaagagggat tacgccggca gcatgcagta
      781 tttcagcgaa agttatattg tgatcgttcc acgcaaactc gatcacaaaa acatccgcat
      841 attttccctt tttcgttgca gagaatctga tctcctttcc accgataacc aattttttac
      901 ttagcgactc tgccttccat ttttttgcat tcccgacaag acatttccat tgcgcacggc
      961 ttgttccaag cattgcagac gtaatatcgg tgtgcggctc aacaggctcg agacaaaaga
     1021 tttctattgt cgtgcccgaa gattttttaa acaaaagtct tgcttcaaca acttttgtgt
     1081 tgttgaagac cagcaaagaa tccggcggca aatacgcact aagatttgag aatacatctt
     1141 cccttatggc tgcgttctga taaatcagaa gcctgcttgt atctctattc tccgccgggt
     1201 atttggcgat cttttcatca ggtaagtgat aatcgaactc agctatcatt aaatttttcg
     1261 gatccatctc atgttttcac actgctaaca cgttatccac cctataagca ggtactcttt
     1321 cttcaatctt tattttcttc cgacaaaccg cttgtagttc aaactcatag gacatttacg
     1381 aggctgtgga taaatacaaa ctggctcttt cctaagaaaa agtgggaaaa agtgttattt
     1441 tgtgtcaata agttataaat tcgttgtcaa tttctctaaa tggctggttt tcttggcgaa
     1501 tacgaagcaa caattgatgg caaggggcga ttccttttac cgggaggttt aaaaaaacaa
     1561 atgccggaag gaacgcaaac gatcgtaata agccgcggtt ttgaaaaatg tttgttactg
     1621 tatccgttga acacctggga agccatagag gaaaaaataa aaaaattaaa cgatttcaat
     1681 ccgaaggtaa gtcaattcag gacgttgttt gttggcgggg cttcttatgt tgacctggat
     1741 tctgccggaa gagttttatt gccgccgtcg ctaaaagaat atgccgggtt aaataaggac
     1801 atcgtgctgg catctgatat tgacaaagta aaaatttggg attcaggtaa gtataaaaag
     1861 ctctttgaag atttttcgtc tgatgctttt gcaaaactcg catccgaggt gatgagtaat
     1921 acttcaaacg cttgagttgt gagcgacgag gctcataatt caaaagctgg cgaaccaggt
     1981 tatcacgttc ctgttttgtt ccacgaggcg atcgaggcat tgaacataca accccgcggc
     2041 gtttacgtgg attgcacgct tggcggcgga ggtcacagca acgggattct tgacaaatta
     2101 gatgaaagtg gacggttgat tgcctttgac caggatgccg atgcacaaaa aaatttgcca
     2161 aacgatcatc gggtcacgtt tttgccatat aatttccgtc acctgcaacg attactgcgc
     2221 ttgcataaac aatcgaaagt aaacggtgtt ctcgcagacc tcggcgttag cagtttccag
     2281 ttcgacaacg cagaacgggg cttttcaaca agattcaatg gcccgctcga catgcggatg
     2341 gacaaaagaa caacaacaac ggcattagac atattaacgg aatacgatga aagcgatctg
     2401 catcggctgt ttgaaaggta tggagaggtc ccaaatgcga aaacattggc ccggtatatt
     2461 gtacaaaaca gaaagttgtc ttcgctgaaa gacaccgtct cctttaaaac ttttctggcg
     2521 ccagtcgtaa aaggcaatcc aaacaagtat ctcgcgcagg tgttccaggc attgaggata
     2581 caagtgaatg atgaattagg agcgcttgat gaaatgcttg ctcagttgcc cgatgttttg
     2641 ctacccggag gccgtgcagt tattatcact tttcattcac tcgaagacag gctggtaaaa
     2701 aattttttcc gcagaatcaa cgaaatccaa gatgaaaaca atcccttcag cacagtaaaa
     2761 aagtcgcctg tttttaaagt tctttcaaag aagccaattg taccgtctgc cgaagaaata
     2821 aaaaagaatc cgagagcgcg tagcgcgaaa cttagagttg cggaaaagtt gcatgaagac
     2881 tgatcatctt tttaaaaagt tttcgcggtg gaaaggagac aacgttatcg aaataccgcc
     2941 ggctgaggca aataaattct gatgaacata acaaattcaa aaaacaaatt aaagaccgct
     3001 gtgcactaca gttgggtagt aaggcatttt tctttcctgg tgtttcttgc gttgctcgct
     3061 gttatataca tagcaaacgg acattggtca gataacacga ttcgggacat caacgtcacc
     3121 gcgaagcagg taaaagacat gcaatatgaa tacaaaaacc tgaaaagcct tgaaatgtat
     3181 aaaagcaggg aatcacaggt tacccaggcg gccgcacagc tcggtttgaa accttcagct
     3241 gaaccgcctg tagaattgga agtagcagga tcaacagccg gacattgaaa aaccatcata
     3301 aagtccacaa ggcagttgct aacctggaaa aacaccttta ttaatggaga tcaaaaaaga
     3361 catactgtgg cgcgtatacc tctgctttat tgtgatcgct gctttatgcc tggttgtaat
     3421 aacgaaggcg ttttacatcc aacaggtgca gggatcctat tggcgcagta tgagcgacag
     3481 cctgcacacg cgcattgaag agatagatgc agagcgcggc acgatctata gcgaagacgg
     3541 gcagatgttg agtaccagta ttccgcaatt tgacatttac gtcgatttcc aggctgatgg
     3601 attgaaagaa aacaatgggc aactttttaa ggacaatgtt gattcgttga gcatctgtct
     3661 tgccggcctc ttcaaagaca gaacgggaaa cgagtaccag tcgatcctca ataaaggtta
     3721 tcgaaacagg aaccgctact tcctgttaaa gaagaaagta agttttgatc aatatcagca
     3781 attaaaacaa tttccgttag tgcggcttgg cagaaataaa agcggcttca ttgcagaagt
     3841 tcagaatatt cgcctgaacc cttatcagct gcttgcattc agaacgatcg gccttgaacg
     3901 gcaaaatgcg cagaaggtgg gtcttgagca aacgtacgat acgctgctga aaggcaccac
     3961 cggcaaacgt ttggtacgat atatcgccgg cggagtcgcg gttcccgttg atgaagacta
     4021 cgagatcgag ccaaagaatg ggaaagatat tgttactacc cttgactcgc gcatacagga
     4081 aataacagag aacgctttga tgaagatgat ggtaagcaat caggcggaac acggttgcgc
     4141 ggtagtgatg gaagtaaaga ccggaaagat caaagcgatt gccaatctcg gccggcaggc
     4201 tgatggctct tactgggaag atttcaatta tgccatgacg ccaacggagc ctggctcaac
     4261 tttcaagctc gcaacgttgc tgtctgttct acaggataaa aaatattctc ttaacacaaa
     4321 tgtgaatttg caaggtggcg tgtggcaaat aaatggcagg acagtgtacg atgcagagaa
     4381 gcatgggcaa acaaatgttc ccgttaagcg tgccttcgaa ttaagttcca atgtggggat
     4441 ggcgaaactg gcatattcaa gttacgcatc gaatccttcg caatttataa accacctaaa
     4501 agcgcttcac ctggattctg ccacaggcat cgatctctat ggtgagcggc ctccctttgt
     4561 tgatcatcct ggcagcaaat attggagtgc cacgaccctc ccttggatgg cctttggcta
     4621 taatgtgctt attactccgt tgcacacatg catgctgtat aacgcagttg cgaataatgg
     4681 cgtgatgatg aagccctatt tattaaatga cgtaatgcaa gatgggatca tcgtcagtca
     4741 aaaaaatcca accgctattg aaaagatctg cgacgatacc gtattacagc aattaaaaga
     4801 atgcttgcgt ggtgtatgca gcgatcccgg ctcaacggct tacaatcttt ttaaaggaac
     4861 accttatgcc gtggctggta aaacaggaac cgcgttggtg gctgatggaa gaaacggtta
     4921 cggcactggg atttatcagt cttcatttgc cggctacttt cctgccgaag atccgcaata
     4981 tacatgcgtg gttgtaataa aaaataagcc gcacgcgcca atgttctacg gcgcgctggt
     5041 ggctggtccc gtgtttaaag agattgcaga caggctgatc acattaaacg ctccgcaaaa
     5101 tgacagttca aaatatgcgc ttcttaaaaa tgtggatagc agttattaca gctttagcgg
     5161 ttcagagaac gatctcaaga tgattttgtc agccacagaa gttcactacc gcgactcgtc
     5221 aaaaaccgaa tggacaagat tagcgaagca acaaagcagt gcagtgttgt caagcgtgcc
     5281 ggtctcgaat aaggtaatgc cttctttgaa cggaatgggt ttaaaggatg ctttgtacat
     5341 atgcgaaaac gcaggacttg ttgtaaaa
//
LOCUS       DASQJI010000371         8269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_963643,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000371 DASQJI010000000
VERSION     DASQJI010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8269
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963643"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VEV83_10465"
     CDS             <1..411
                     /locus_tag="VEV83_10465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45581.1"
                     /translation="FYKLLKTRHGDAIELQIEVDKKYSNYLLPSLSLQLLVENAVKHN
                     VVSRQQPLTIDIFSIAGNKLAVNNNLQPKIVKAASNRVGLSNIRSKYELLKYYGFEIL
                     QDAKNFTVVLPLIWNNAEGKHFEIVKNKPKLNFN"
     gene            429..1205
                     /locus_tag="VEV83_10470"
     CDS             429..1205
                     /locus_tag="VEV83_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK45582.1"
                     /translation="MQILIVEDEDLAVKKITKTLHEVNASAEIVGVTDSIDSTASWLQ
                     NNAVPDLILMDIELSDGQSFEIFSRIQVKSPVIFTTSYDEYALKAFKVNSIDYLLKPI
                     QKEDLRAALNKYEQMKQAYSATDTPALNMDTLIKELQQKLQPKEFRKRFLVKHGQKLV
                     SIDIEEIAYFFSDGRLNFFKTYDNRKFVVDYTMDEFEDMLDPQRYFRISRSFYVSVNS
                     IDQIHDYFGNRLILGLKPDLDKEAIVSREKVTDFKKWMGK"
     gene            1283..1705
                     /locus_tag="VEV83_10475"
     CDS             1283..1705
                     /locus_tag="VEV83_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HYK45583.1"
                     /translation="MKIFQKVIHLEERKRGFHLITPEVTRELTQISEIKTGVCHVFIQ
                     HTSASLTINENADPTVRKDFESYFNRAVPESRYDYIHNDEGPDDMPAHLKASLLGSSV
                     MIPITNGKLALGTWQGIYLCEHRNYGGERVIVVTAWGE"
     gene            complement(1735..4791)
                     /locus_tag="VEV83_10480"
     CDS             complement(1735..4791)
                     /locus_tag="VEV83_10480"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45584.1"
                     /translation="MKQFFFTLALTCLALHLFSQQPKQYSFVHFSTSNGLVTNTVNYA
                     TQDANGYMWFATIDGLQRYDGNNFLTFRKQSSNPNSLPADNIVQVFTDKKQNLWVWSG
                     TTVGIFNTSTFTFTPVPVENETKKDPFTIVFLGQADNGYAAIYVDKKGIYNYDPVKKM
                     FISKGFFQLPKGWGIADIRSFSDDGKYFFACTGGVAIFDSKTGHLNYRGHNQDNNRYI
                     QLLQNDSSIIKVYFIEGNKLWFGSWPMVAYAPFITSVDAATGERKQFSVTREFDLGYT
                     ESRGGLLQRNGRIWFCGRTYVVEFTGTGDKRFNLIQSPAHDEQSIRFDQAQTMYEDKE
                     HNIWICTDNGVYLFNPDAQTFHNYNVSRPGAEGTETPTITASQLNDGRILIGTWGGGL
                     YLYDSSFDPLPLPASLKALSSYYSVWSIHQHSKTGLIWMGMMNGELVVYDPVKNKAQM
                     FRQKIFEGSTIRTIAEDKQGSLWFGSQGGAVIKWDIHLAENNVQQGYRVVKPKGGGYM
                     QKLFADRQGFIWAGSVASGIYKYEPSTNKEVEHLTKEGPLEKQLAANSIADIFQYNDS
                     LLLIATGAVNLYNLKTRTISHFSTEDGLPSNTINSFAVDDKGGFWMGMAHGLCRVKLD
                     KLIFSTYDRRDGIAHDLFNPSGVCKLRDGRLVYTTDKNFLVFDPRAFISAPVPPVPLI
                     TDFKLANKRLLVDSLFQLKRISLGYANTSIVIEFNSLNYTKQNKIHYAYKLEGLDKDW
                     QSANELNQAIYNYLMPGNYTFKVRAENNDGSTSAERILKIDVMPPFWQAWWFLGLLAL
                     AVIAVFYIVDNERVKKLKALQNVRTQIAHNLHQDVNTTLSNISLLSEMAKIKVDKDTQ
                     RSKEYIDQISDKSKKMTDSLSDMLWTLDPSNDNMQKTILRMKETAEAFQSTHNTDIKL
                     AVDDKVKTLKLNMKTRHELFFIFKEALRNISAHANGSPSLVDIDLSGGKLLMKIQNAD
                     ASVNSASLEFEQSKKDMFKRAKSMKAEFDLLTDKKGVSLVLVVPIA"
     gene            5069..6460
                     /locus_tag="VEV83_10485"
     CDS             5069..6460
                     /locus_tag="VEV83_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide disphospho-sugar-binding
                     domain-containing protein"
                     /protein_id="HYK45585.1"
                     /translation="MMEDIQKMEVVQTDLFAKTRKKILFANFPADGHFNPLTGLAVHL
                     KNLGHDVRWYTSNTYAAKLKKLNIMHYRFKTALEVTGDNLDEVFPERSKIKGQVKKLV
                     FDMINAFIFRGPQYFDDICEIREEFDFNIMISDCAFSGIPFVKEKLGIPVISIGVLPL
                     TETSKDLPPSGLGMTPVRSFFGRWKQSLLRFVADNILFSKPTSVMNSILREYHINPEG
                     SNVFDILIRKASLLLQSGTPGFEYTRSDLGTNIRFIGPLLPYRADKGHDVWTHEKLSQ
                     YEKIILVTQGTVEKDVSKLLVPTLEAFKNSKYLVVATTGGSETEELRKKYPYENIIIE
                     DFIPFSDIMPYADVYITNGGYGGVMLSIQNQLPMVVAGIHEGKNEINARIGYFDLGIN
                     LKTERPAGAQLRTAVEKVLSDDKYYDNVKKLSKEFSKYNPNQLLESYIDEVLQAETTA
                     STSAKMCVAQKGL"
     gene            complement(6479..7243)
                     /locus_tag="VEV83_10490"
     CDS             complement(6479..7243)
                     /locus_tag="VEV83_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45586.1"
                     /translation="MQRTTIISVQDLVKNYGDFQAVKGISFNVYEGEIFGLLGPNGAG
                     KSTTLEIIETLRSKTSGKVTVDGFNLDESPNEIKKIIGVQLQTSGYYPGLNLTELIRL
                     FAGLYNQPVNPTDLLGIVNLKDKAKAKFKELSGGQKQRFSIATTLINKPKIIFLDEPT
                     TGLDPQARRNLWGLVKDIRSQGTTVIITTHYMDEAEILCDRVAIIDSGKIIAMASPDQ
                     LIDDLVATGFERPKEVKQANLEDVFLNLTGKQLREE"
     gene            7335..8237
                     /locus_tag="VEV83_10495"
     CDS             7335..8237
                     /locus_tag="VEV83_10495"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK45587.1"
                     /translation="MPNIENKPTVIYIIADRRSGSTLLENMLSKSEEIISVGELAMLR
                     GHIFKEGPGEMWAWHCSCGKPVLQCDFWSRVLKGNVDADFETKISWPYKLLTTPLASL
                     SPRTSCRSLTSYVHTPENAQTTDFLKNIYETISQTYHKKFIVDSSKDAMQALAVYECK
                     EVDAKFIWLVRDLRAVTFSKLKRWQVNKRSDKGAYETMLDSYAYKKLCKAVLSCMDKQ
                     DTLKLHYEAVALEPQKALDTICSSFGLKKFAAPEVMELTNDHTIAGTPGRFQSKPIAA
                     DNSWRSFYEDKKLLSALGKMFNAL"
BASE COUNT         2326 a         1831 c         1816 g         2296 t
ORIGIN      
        1 ttttacaaat tattaaaaac gagacacgga gacgccatag aactgcagat cgaagtcgat
       61 aaaaagtaca gcaattacct gctgccctca ttgagtttgc aattgcttgt tgaaaacgca
      121 gtaaagcata acgtggtgtc gaggcaacaa ccgcttacca ttgacatttt cagcattgcc
      181 ggaaataaat tagcagtgaa caataatctt cagccaaaga tcgtgaaagc tgcctcgaat
      241 cgggtagggc tatctaacat caggtcaaaa tatgagttat tgaaatatta tgggtttgag
      301 atcctgcagg acgcgaaaaa ttttaccgtc gtgcttccat tgatctggaa caatgcagag
      361 ggcaaacatt tcgagatagt aaaaaataaa ccaaaactga attttaatta agcttaaaat
      421 tataccacat gcaaatcctg atcgtagaag acgaagacct cgcggtgaaa aagatcacta
      481 agaccttgca cgaagtaaac gcgtctgcag agatagttgg tgtcactgac agcattgact
      541 ccaccgcatc gtggcttcaa aataacgcag tgccggatct aatcctcatg gacattgagt
      601 tatctgacgg tcaaagcttc gaaatattca gccgcataca ggtgaagagc cccgtgatat
      661 tcacaacgtc gtacgacgaa tatgcgctga aggcattcaa agtaaacagc attgactact
      721 tactcaaacc aattcaaaaa gaagatctgc gtgcagcgct taataaatac gaacaaatga
      781 aacaggcgta cagtgctact gatacgccgg ccctgaatat ggatacattg ataaaggagc
      841 ttcagcaaaa actccaaccg aaagaattcc gcaaaaggtt tttggtaaaa cacgggcaga
      901 aactggtgtc gatcgatatt gaagaaatcg catacttctt cagcgacggc aggctgaatt
      961 ttttcaagac gtatgacaac cgcaaatttg tagtcgatta cacgatggac gagttcgaag
     1021 acatgctcga tccgcaaaga tattttcgta tcagccgttc tttttatgtt tcagtgaaca
     1081 gcatagacca gatacacgac tattttggca accgtttgat cctcggcctc aaacccgacc
     1141 tggataaaga agcaattgta agtcgcgaaa aggtaaccga tttcaaaaag tggatgggaa
     1201 aatgattgtt gcccggttga taaaattcaa caatagctaa cggtcagatg cttcaaaagc
     1261 gtcagaccga tttttttcac gtatgaaaat atttcagaaa gtcattcacc tggaagagag
     1321 aaagcgcgga tttcatctca tcacgccaga ggtcactcgt gaactaactc agataagtga
     1381 aataaaaacc ggcgtttgcc acgtattcat tcaacacact tctgcttcat tgaccattaa
     1441 tgaaaatgca gatccaaccg taagaaaaga ttttgaaagt tacttcaaca gggcggtgcc
     1501 ggaaagccga tatgattaca ttcacaatga tgaaggcccc gatgatatgc ctgcacattt
     1561 aaaagcatct ttactcggca gctccgttat gatccctatc acgaatggga aacttgcact
     1621 cggcacgtgg cagggaattt atctgtgcga acacagaaat tatggtggcg aaagagtgat
     1681 tgttgttacg gcgtggggcg aataaattcc cgcttgatcc cgaggatatg ccggtcatgc
     1741 tatcggcaca acaagtacta aagagactcc ctttttatcg gtcagcaagt caaattcagc
     1801 tttcatcgat ttggcccgct taaacatgtc ctttttactt tgttcgaatt ccaaacttgc
     1861 ggaattaaca gatgcgtccg cattttgaat tttcatgagc agcttgccac cggagagatc
     1921 gatgtcgaca aggcttggtg atccgttcgc atgcgccgaa atgtttctca gcgcctcttt
     1981 gaaaataaaa aacaattcat gtctcgtctt catgttcagc ttaagggtct tcactttgtc
     2041 atccactgcc aattttatgt cggtattatg cgtactttga aaagcttcgg ccgtttcttt
     2101 cattcgcaga attgtttttt gcatgttatc attcgacggg tcaagtgtcc agagcatatc
     2161 gctcagggaa tcggtcatct ttttgctctt atcactaatt tggtcaatgt attctttgga
     2221 gcgctgcgtg tctttgtcaa cctttatctt cgccatctcg cttaacaaac tgatgttact
     2281 cagtgtggtg ttcacatcct ggtgaagatt gtgtgcgatc tgcgtcctta cattttgcag
     2341 tgccttgagt tttttcacgc gctcattatc gacgatgtag aaaacggcga tgactgcaag
     2401 ggccaacagg ccaaggaacc accatgcttg ccaaaaaggt ggcataacat ctatttttaa
     2461 aatgcgctcg gcgctcgtac ttccgtcgtt gttctcggct cttactttga aagtatagtt
     2521 tccgggcatc aaataattat aaatggcctg gttcaattca tttgccgact gccagtcttt
     2581 gtcaagtcct tccagtttat aggcgtaatg gatcttattt tgctttgtat agttgagtga
     2641 gttgaactcg atcactatag aagtgttcgc ataaccaagg ctgatcctct tcaattgaaa
     2701 aagcgaatca acgagtaacc gtttgttcgc aagtttaaaa tctgtgatca ggggaactgg
     2761 tggaaccggc gcactgataa acgctctggg atcgaagacc aggaaatttt tatcagtcgt
     2821 gtacacgagc cggccatcac gcaatttgca gacaccagaa gggttgaaaa gatcatgtgc
     2881 gataccgtcg cgcctgtcgt acgttgaaaa aatcagcttg tctagtttca cgcggcaaag
     2941 gccatgcgcc atccccatcc aaaagccgcc tttatcatct accgcaaaac tgtttatagt
     3001 gttagagggc aaaccatctt cagtactgaa atgtgagatc gtccttgtct tcaaattgta
     3061 aagattcacg gcaccggtcg cgatcagcaa caaactgtcg ttatattgaa aaatgtcggc
     3121 gatagaattt gctgcgagtt gcttttctag aggcccttct ttagtaagat gttcaacttc
     3181 tttatttgtg gatggctcat atttatagat cccgcttgct acactgcctg cccaaatgaa
     3241 tccttgccgg tcagcaaata acttttgcat atagccgcct cctttaggct tcactacacg
     3301 ataaccttgc tgtacattat tttccgcgag atgaatgtcc cacttgatca ctgcacctcc
     3361 ctggctgcca aaccagagac ttccctgctt gtcttctgcg atggtcctta tggtgctgcc
     3421 ttcgaaaatt ttttgcctga acatctgtgc tttattcttt accggatcgt ataccaccaa
     3481 ctctccgttc atcatgccca tccagatcaa tcctgttttg ctatgctgat gaatcgacca
     3541 gacagaataa taacttgata aagctttcaa agacgccggc agcggcagcg gatcaaaact
     3601 gctgtcataa aggtacaaac ctccgcccca tgtgccgatg agtattcgtc catcgttcaa
     3661 ttgtgaagcc gttatggtag gagtttcggt gccttcagcg ccgggccggg atacattata
     3721 attatggaag gtttgagcgt ccgggttaaa aagatatacg ccattatcgg tgcatatcca
     3781 aatattgtgt tccttgtctt catacatggt ttgtgcctgg tcaaaacgaa tgctttgttc
     3841 atcatgcgcc gggctttgaa ttaagttgaa tcgtttatca ccagtgccgg taaattcaac
     3901 aacgtacgtt ctgccgcaaa accatattct cccgtttcgc tgcagtaagc ctccgcgcga
     3961 ttcagtatag ccgagatcga attccctcgt cacgctgaac tgttttcttt cacctgttgc
     4021 agcatcaaca gaagtgataa agggcgcgta agcaaccatc ggccagcttc cgaaccacag
     4081 cttgttacct tcaataaagt atactttaat tatcgatgaa tcattttgta ataattgtat
     4141 atacctgtta ttatcctggt tgtgccccct gtagtttaag tggcctgttt tagaatcgaa
     4201 aattgcgacg ccaccggtgc atgcgaaaaa atatttgcca tcgtcagaaa agctccggat
     4261 gtcagcaatg ccccagcctt tcggcaattg aaaaaagcct ttcgatataa acattttttt
     4321 tacgggatca taattgtaaa ttcctttctt gtcgacatag atcgcagcat agccattatc
     4381 tgcctggccg agaaacacaa ttgtaaacgg gtccttcttc gtttcatttt ccacaggcac
     4441 cggggtgaaa gtaaaagtgc tcgtgttaaa gatgccgact gtagtgccag accaaaccca
     4501 aagattttgc ttcttgtctg tgaacacctg cacaatattg tcggcgggca atgaatttgg
     4561 attcgacgac tgttttcgaa acgtaaggaa attgttacca tcataccgct gcaggccgtc
     4621 gatcgtggca aaccacatgt aaccatttgc atcctgcgtc gcataattga ctgtgtttgt
     4681 taccaggcca ttgctcgtac taaaatgcac aaatgagtat tgtttcggtt gttgtgaaaa
     4741 gagatgcagg gcaaggcagg ttagcgcaag agtgaaaaag aattgcttca caaagcggac
     4801 gattgagttt tgcccaaata taattcagcg tttttttatg gcgaaacaca acgctgaaca
     4861 atctgtatga atttcaaacg atccgatttg gattgccgag atcattacac cgctgcccct
     4921 ctaatgccgc tgtggcgcgt aatgtcaaaa agttctttca aattgttatt gcgtttcgtc
     4981 aatccattta ctaaaaaatg cgattcatac agctccgtct ttcctttccc ctttctcaac
     5041 ggtaacattg tactgtcaaa attcaacaat gatggaagac attcaaaaga tggaagtcgt
     5101 gcagacagat ctgttcgcaa aaacacgaaa aaagatcctg ttcgctaatt ttccggcaga
     5161 cggtcacttt aatccgctca caggtcttgc cgttcacctg aagaatttag gtcacgacgt
     5221 tcgttggtat acttcaaata cgtatgcggc taaattgaaa aagctaaaca tcatgcatta
     5281 tcgttttaag accgcgctgg aagtgaccgg cgataacctg gacgaggtgt ttccggaaag
     5341 aagcaagata aaagggcaag taaaaaaact ggtctttgat atgatcaatg ctttcatttt
     5401 tcgcggccca cagtatttcg acgatatctg tgagatacgt gaagagttcg atttcaatat
     5461 tatgataagc gattgcgctt tttccgggat cccttttgtc aaggaaaaac ttgggatacc
     5521 ggttatttct atcggtgtac taccgcttac tgaaacgtca aaagaccttc cgccgtccgg
     5581 gcttggaatg acgcctgtgc gatccttttt cggaagatgg aaacaatcgc tgctccggtt
     5641 cgttgcggac aacatacttt tcagcaagcc aacaagtgtg atgaattcaa tactgaggga
     5701 ataccatatc aaccccgagg gttcaaatgt cttcgacata ctaattcgga aagcgagttt
     5761 gcttttacaa agtggtacgc ccggattcga gtacacacgc agcgatctcg ggaccaatat
     5821 tcgttttatc gggccgcttc ttccgtatcg cgccgacaaa gggcatgacg tgtggacgca
     5881 tgaaaagctg agccagtatg aaaaaataat tctcgtaaca cagggcacag ttgaaaagga
     5941 cgtttctaaa ctactggtgc caacactcga agcatttaag aacagcaaat atctggttgt
     6001 tgcaacaact ggtggttccg aaactgaaga actaaggaaa aagtatccgt atgaaaacat
     6061 catcattgaa gattttattc ctttttctga catcatgcct tatgccgatg tatacataac
     6121 aaacggcggc tacggcggcg tgatgctcag tattcagaac cagttgccca tggtggtggc
     6181 cggtatacat gaaggcaaga atgagatcaa cgccaggata ggatattttg atcttggtat
     6241 caatctgaaa actgagcgtc cggctggtgc acaattaaga acggccgtcg aaaaagtttt
     6301 gagtgatgac aagtactacg acaacgtcaa gaagctgagc aaagaatttt cgaaatataa
     6361 tcctaatcaa ttgctggaaa gttatattga tgaggtgcta caagctgaaa caactgcaag
     6421 caccagcgca aaaatgtgcg ttgcacaaaa aggtttgtaa gaagtgaacg catagcagtc
     6481 actcttcccg caattgcttg ccggtcaagt tgaggaaaac gtcttcgaga tttgcttgtt
     6541 taacttcttt cggtctttca aacccggttg ccacgaggtc atcgatcagt tggtcgggtg
     6601 atgccatcgc aattatcttt cctgagtcga taatagctac gcggtcgcac aagatctcag
     6661 cttcatccat ataatgtgtt gtgatgatga ccgtcgtgcc ctggcttcga atatctttta
     6721 ccaagcccca aaggtttcgg cgtgcctgtg ggtcgagacc cgttgtaggt tcgtcaagaa
     6781 aaataatttt tggtttattg atgagcgtgg tcgcaattga gaaacgctgt ttttgtccgc
     6841 cgctgagttc tttgaatttt gcctttgcct tatccttcag gtttacaatc ccaagcaggt
     6901 ctgtcgggtt aaccggctgg ttgtacaaac cggcaaacag ccgaatcaat tcagtaagat
     6961 taaggcctgg gtaatagcct gacgtttgca gttgtacgcc aatgatcttc tttatttcat
     7021 ttggcgattc atcgaggtta aatccgtcga cggttacctt gccgctcgtt ttgctgcgta
     7081 atgtttcaat gatctcgagc gtggtagatt tgccggcgcc atttgggccg agtaaaccaa
     7141 atatctctcc ctcatacaca ttgaagctga tccctttcac cgcctggaaa tccccgtaat
     7201 tcttcacaag atcctgcact gagattatcg tcgttcgctg catcgcggca agttaatgta
     7261 taatcaaatt cattatttca aagaaaacca tccgcattcc gccgtttttc atttcaaaca
     7321 ataactttgg cgcagtgccc aacatagaaa ataaacccac ggttatttat ataatcgccg
     7381 acaggcggtc gggctcgacg ctactcgaaa acatgctttc gaagtcggaa gaaattattt
     7441 ctgtcggcga actggcaatg ctgaggggac atatttttaa ggaagggccc ggtgaaatgt
     7501 gggcatggca ttgctcgtgc ggaaagcctg ttctgcagtg cgacttttgg tctcgcgtgt
     7561 tgaaaggcaa cgttgatgca gattttgaaa cgaagatcag ttggccgtat aagttgctca
     7621 caacaccgct cgcttcttta tcgccacgca cttcatgcag atctttgact tcatatgttc
     7681 atacgcccga aaatgcgcaa acgacggact ttcttaaaaa catttatgaa acaataagcc
     7741 agacgtacca caagaagttt attgtagatt cttcaaagga tgccatgcaa gcgctggcag
     7801 tgtatgaatg caaagaggtt gatgccaaat tcatctggct ggtacgcgac ttgcgcgcgg
     7861 ttacattttc taaactaaaa aggtggcagg tgaataaacg gtctgacaag ggagcctatg
     7921 aaacgatgct cgacagttat gcttacaaaa aattgtgcaa ggcggtgctc agttgtatgg
     7981 acaaacagga tacattgaaa ctgcactatg aggctgtcgc ccttgagcct caaaaagctt
     8041 tggacacgat ctgttcttca tttgggctca agaaatttgc ggcgcccgag gtaatggagt
     8101 taacgaatga tcacacgatc gcgggcaccc ccggcaggtt tcagagcaaa ccgattgcag
     8161 ccgataattc atggcgttct ttctatgaag acaaaaagct gttgagcgca cttggaaaaa
     8221 tgttcaatgc gctatgatca aattaagctg atgaactcgc actttttta
//
LOCUS       DASQJI010000372         3817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1885563,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000372 DASQJI010000000
VERSION     DASQJI010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885563"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..3814
                     /locus_tag="VEV83_10500"
     CDS             137..3814
                     /locus_tag="VEV83_10500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45588.1"
                     /translation="MRYKLKRHKIFRARSLFRFSIISLTLIVSSCSENKKRQVSEGAT
                     NDTISYPQITVLASLPDSNKPVTISLASMPKPFVTQQLSPAPVHEYVDSITGSPIPAD
                     AQGRGFFTNYTTDNGLALDQVYCGYKDSIGNLWFGTSGGGVSKYDGKDFTNYTTAQGL
                     ANSIVWTIVEDNAGNLWFGTDGSGVSKYDGRTFTNYGKAQGLVDDVVLTIIKDKAGNL
                     WFGTLGGISKYDGRVFTNYTTADGLPNNEVRGIVQDRKGDLWFGTSGGISEYDGHRFR
                     NYQRVQGLPSDSIRTLIEDRMGNLWFGTAAGVSKFDGKKFTGYPMAGGLANALVNSIA
                     QDRSGNLWFGTDGYGAVKLDSNNVFTSYGIRQGLPNNAVTSVTEDATGDLWFSTFGGG
                     ISKYGGKSFTSFTTAQGLNRSVVYSITEDQSRNLWFGTYRGGADKYDGKSITNYTTAQ
                     GLPSNDIYAVEKDRMGNLWFGTAANGVCKYDGKTFTTYTTSQGLADDRVFGILDDKQG
                     NMWFATLKGISEFHDETFTNYSTRQGLANDQVFTIFEDSEGNIWFGTSGGGVTEYNGS
                     TFTNYTTGQGLANDVVWTIDEDKDGNLWFGTQDGLSLLRKETLATFSESIKQKRPFTG
                     NLFETITSKDGLPDNFITQILQSNDQKLYAGTNLGVCELVPSSDGDKKQKWTVGKTFN
                     SLTGYPVKDVNGGTRAMFIDSKGIIWIGTGSDKTGLVRFDPKSVSNSASKFPALVIER
                     IRLNNASICWNDVKPVAADMPDSNATPAAAIEEISLFGRRLTTTEKDSIKDQLAGVSF
                     DGITKWYPIPEKLVLPHRFNNISFDFNTIETARNFRVKYQYMLDGYNKEWSVPDDKTS
                     AVFGNIYEGHYTFKVRAQNAAGTWSEPLTYSFRVLPPWWRTWWMYAVYAIVIIGMVRL
                     YFWWNTRRIIYRNKVLEHKITIATSQLREEKETVEEQNKKIESTLAELRATQAQLIQS
                     EKMASLGELTAGIAHEIQNPLNFVNNFAEVNKDLIEELKAEFVKERLQPGQQLQDEIL
                     NDIAGNEEKILHHGKRAEAIVKGMLQHSRTSTGVKEPTDINALCDEYLRLCYHGLRAK
                     DKAFNASYSTDFDDTIGKIKIVPQDIGRVILNLLSNAFYAVHEKRKSGAEKFNPTVVI
                     RTKKEGDKVLIITEDNGGGIPQKLVDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGG
                     EIKVATKEGESTIFTIELPVE"
BASE COUNT         1178 a          782 c          951 g          906 t
ORIGIN      
        1 aaactgctgc aggatcaaga ccagcaagtt tcgcgcgcat taaaatgcaa atatccggca
       61 taataaagcg taatttccct tcgaaatcgc gtaccggcat cagccagcca aatagcaatg
      121 atcggccaac acccgtatga gatacaaact aaaaagacat aaaatatttc gagcacgttc
      181 tttatttaga ttcagtatca tttcgctcac gctgatcgtt tcgtcgtgct cagaaaataa
      241 aaagcggcag gtaagcgaag gagcgacgaa cgatacaatt tcgtatccgc aaataacggt
      301 tcttgcttct cttcctgata gcaataaacc ggtaacgatt tcgctagcct caatgcctaa
      361 gccgtttgtt acacaacaac tctcgcccgc cccggtacat gagtatgttg atagtattac
      421 cggttcgcca attcctgcgg atgcgcaggg caggggattt tttaccaact acaccaccga
      481 caacggcctt gctcttgacc aggtttactg tggatataag gacagtatcg gaaacttatg
      541 gtttggtact tctggcggcg gagtaagcaa atatgatggg aaagatttta cgaattatac
      601 aactgcgcag ggtctggcca atagcatcgt ctggactatt gtggaagata atgcgggcaa
      661 cctttggttt ggcaccgatg gaagtggcgt gagtaaatac gatggcagaa cttttactaa
      721 ttatggtaaa gcgcagggcc ttgtggatga cgttgtgtta accattataa aagacaaagc
      781 ggggaacctt tggtttggaa cattgggtgg catcagtaaa tatgatggtc gcgttttcac
      841 aaattatacc accgccgatg gcttgccgaa taacgaggta cgtggaattg tacaagacag
      901 aaaaggagat ctttggttcg gaacgtctgg tgggatcagt gaatatgatg ggcacaggtt
      961 caggaattat cagcgagtgc aaggattacc gagcgattca atacgaacct tgattgagga
     1021 cagaatgggt aatctctggt ttggtaccgc tgccggcgtt agcaagttcg atggaaaaaa
     1081 atttacaggc tatccaatgg ccggcgggct tgcaaatgca cttgtgaata gtattgcaca
     1141 agatcgttcg gggaatcttt ggtttggcac tgacggatac ggcgccgtta aactcgatag
     1201 taacaatgtg tttaccagtt acggcataag gcaggggcta ccaaataacg ccgtcaccag
     1261 cgtcaccgag gacgcaactg gtgatttatg gtttagcact ttcggaggtg gtataagcaa
     1321 atatggtggc aagagtttta ccagcttcac cacagcgcag ggacttaaca gaagtgttgt
     1381 atatagcatc acagaagatc agtcacggaa tctctggttt ggcacctacc gcggtggcgc
     1441 cgataaatac gacggtaaaa gtatcacgaa ctacacaact gcccagggac ttccgagcaa
     1501 tgacatctac gctgtagaaa aagaccggat gggtaatctt tggtttggga ctgctgccaa
     1561 cggcgtgtgt aaatacgacg gaaaaacttt tacgacatat acaacttccc aggggctcgc
     1621 tgacgaccgg gttttcggca ttcttgacga caaacaaggc aacatgtggt ttgccactct
     1681 taaaggtata agcgagttcc atgacgaaac cttcacgaac tattcaacgc gccagggact
     1741 tgcaaacgac caggtgttta cgattttcga ggattccgag gggaatattt ggttcggtac
     1801 ttccggcggc ggtgtgacgg aatataatgg cagcacgttt acaaattaca ccacggggca
     1861 gggactcgca aacgacgtcg tttggacgat cgatgaggat aaggatggca atctttggtt
     1921 tggcacacag gacggattaa gcttgctgcg taaagaaacg ctggcaacgt tttctgaaag
     1981 catcaaacaa aagaggccat ttacaggaaa cttgtttgaa acaataacaa gcaaagatgg
     2041 gcttccggat aatttcatca cgcagatact ccaaagcaat gatcaaaaat tgtatgcagg
     2101 aacaaatctg ggagtatgtg agctggttcc ttcatctgat ggtgacaaaa aacaaaaatg
     2161 gacagtcgga aaaacgttta attccctgac aggctatccg gtgaaagatg tgaacggcgg
     2221 aacacgtgcg atgtttatag atagcaaagg catcatctgg atcggaacgg gttctgacaa
     2281 aaccggcctt gtccgttttg atccaaaatc cgtttctaat agtgccagta aatttcccgc
     2341 gcttgttata gaaagaataa ggctgaacaa tgcaagtatt tgctggaatg atgtaaaacc
     2401 ggtcgctgct gatatgcccg acagtaacgc aactcctgcc gctgcgatcg aggaaataag
     2461 cttattcggc aggcgattaa ccacaacgga aaaagattct atcaaagatc agcttgccgg
     2521 cgtatcattc gatggtatca cgaaatggta cccgatcccg gaaaaattag ttctgccgca
     2581 tcgcttcaac aacataagtt ttgacttcaa caccatcgag accgccagaa atttccgggt
     2641 aaagtatcaa tatatgctcg acgggtataa caaggagtgg agcgttccgg acgataaaac
     2701 atcggctgtt tttggaaaca tctatgaagg ccattacact ttcaaagtgc gggctcaaaa
     2761 cgcggccggg acatggagcg aaccgctcac ttattcgttc agagtactgc cgccgtggtg
     2821 gagaacgtgg tggatgtatg ccgtgtatgc aattgtgatc ataggaatgg tgagactgta
     2881 tttttggtgg aatacgaggc ggataattta tcgaaacaaa gtacttgaac acaaaataac
     2941 aatagcaaca agccaactgc gggaagagaa agaaaccgta gaggagcaaa ataaaaagat
     3001 cgagagtact ttggcggaac ttagagccac acaggcacaa cttatccaat cagaaaaaat
     3061 ggcttcactt ggtgaattga cagccggcat cgcgcatgag atacaaaacc cgctaaactt
     3121 cgtgaataac ttcgctgaag tgaataaaga tctgatcgaa gaactgaagg cggaattcgt
     3181 taaagaaaga ttacagccag gtcagcaatt gcaagatgaa attctaaatg acattgcggg
     3241 aaatgaagaa aaaattcttc atcatggcaa acgcgcagaa gccatcgtaa aaggaatgtt
     3301 gcaacattcg cgtacgagca ccggtgtaaa agagccaacg gatattaatg cgttgtgcga
     3361 tgagtatctc cgtctttgct accacggcct tcgcgcaaag gacaaagcat tcaacgcatc
     3421 atactccacg gattttgatg atacgattgg gaagataaag attgtaccac aggatatcgg
     3481 aagagttatt ttgaatttgt tgagtaatgc attttatgcg gtgcatgaaa agcggaaatc
     3541 aggagctgaa aaattcaacc caactgtcgt catacgaaca aaaaaagaag gcgacaaagt
     3601 tttgatcatc acggaggaca atggcggggg tattcctcag aaattagtgg acaaaatatt
     3661 tcagcccttc tttactacca agccgaccgg cgaaggaacc ggtttaggtt tgagcctgag
     3721 ctatgatatt atcaaggcgc acggcggtga gatcaaagta gcaaccaaag aaggtgagag
     3781 tactatattt acaatcgaac taccagttga gtgatga
//
LOCUS       DASQJI010000373         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2500076,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000373 DASQJI010000000
VERSION     DASQJI010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500076"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            501..1025
                     /locus_tag="VEV83_10505"
     CDS             501..1025
                     /locus_tag="VEV83_10505"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK45589.1"
                     /translation="MLLNFHQPKIYVLLIPAILLSCTQGSNNKLSDEQKKEIRSAIQP
                     VIEQVFDAAAHADTAKLFDAFSVDAQFTYLDITGEFYEPAVYKQMAGQWFGMITSEII
                     EKGTEKYNFINEYNVAWSCTGTLTATYKNGKQEMYKPFGMTILFRKMNNKWKGVFIQE
                     SSQQPVATDTTNHS"
     gene            complement(1101..>1829)
                     /locus_tag="VEV83_10510"
     CDS             complement(1101..>1829)
                     /locus_tag="VEV83_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK45590.1"
                     /translation="YARVYEPKAGTKNNAAVIFVHGAGYLQNVDYWWSYYFREMMFNN
                     LLADKGYTVIDIDYRGSAGYGRDWRTGIYRYMGGKDLDDEVDAARFLVKNYDIDSARI
                     GMYGGSYGGFMTLMALFTQPNVFKAGAALRPVTDWAHYDHEYTSAILNEPFTDSIAYA
                     RSSPINFAEGLKNHLLICHGMVDVNVHFQDAVRLSQRLIELGKDNWELAAYPVEDHSF
                     VEASSWTDEYKRILKLFDENLLNK"
BASE COUNT          540 a          408 c          381 g          500 t
ORIGIN      
        1 cgaatgattg tttcggggtg tacctgtaca accctggatg agcctctttc agcgcgcgaa
       61 caaagatctc atagtcctgt tgtaattgcg gcatcgaaaa gctgggcggg ttattttgtg
      121 ctctcgcaat aaacggtaaa aagaagatag ttgctatcaa taattggttt cgcataaaaa
      181 caatttgagc tgcaaatagc tcagtttatg cggcgttatc aagaagtaaa cagtgagtcg
      241 tatttttttc gggttgaaac gtagtaatgg gcgtgcgcgc catgatctta ggtctcatcg
      301 ctatgctgca ggaagatttt tcgcgttccg gcatcgacaa acgagccatt agtttcgtcg
      361 cagctgcagg ctttgtccat tgctcataca tgcactcagt ttgatttgca tattaaacat
      421 atctgatttg aaatcttcat ttaaaaaaac tatacgatat tgcacaacca aacttactca
      481 ccaaaacaac tgcaattaca atgttattaa atttccatca gccgaaaatt tacgttctgc
      541 ttattccggc aatactgctt tcgtgcacgc aaggatcaaa caataaattg agcgatgaac
      601 aaaagaaaga aatacgatca gcaattcaac ctgtgatcga acaggtgttc gatgcagccg
      661 cacatgcaga caccgcgaag ctattcgacg ccttttcagt tgacgcgcag ttcacatatc
      721 ttgatataac aggcgaattc tatgagcccg ccgtttataa acaaatggct ggtcagtggt
      781 ttggtatgat cacaagcgag atcattgaaa aggggacaga gaaatacaat tttataaatg
      841 agtacaatgt agcgtggagt tgtacaggca cgttaacggc aacatacaaa aacggtaagc
      901 aggaaatgta caagcctttt ggtatgacaa tcttattccg aaaaatgaat aataaatgga
      961 aaggtgtctt catccaggaa tcgagccaac agccagtggc taccgataca acgaatcatt
     1021 cataaaaatg ttttcggctg cgcgtctgcc ggaggtaaga ttttatctca gcgtttacat
     1081 cgctctcacg aaaaaagata ttacttgttc agtaaatttt catcgaacaa ttttagaatg
     1141 cgtttgtact catccgtcca actgctggcc tctacgaaac tatgatcttc tacaggatat
     1201 gcggcaagtt cccaattgtc tttccctaac tcgatcaagc gctgcgataa tcgaaccgcg
     1261 tcctggaaat gcacattcac atcaaccatg ccgtgacaaa tgagtaaatg gttttttagg
     1321 ccttcagcaa aattgatagg cgacgaacgg gcatatgcaa tgctatcggt gaacggttcg
     1381 ttcaaaatag ccgatgtgta ttcgtgatcg taatgtgccc agtctgtaac cggcctcaaa
     1441 gcggctcctg ctttaaaaac atttggttgg gtgaagagtg ccatcaacgt catgaagccg
     1501 ccgtaacttc cgccatacat gccaatgcgc gctgaatcga tgtcatagtt tttaaccagg
     1561 aaacgcgctg catcaacttc atcatcgaga tcttttccac ccatataacg atagatgccg
     1621 gttcgccagt cgcgtccata accggcgctg ccgcgataat cgatatcgat aaccgtgtac
     1681 cctttatccg ctaacaggtt attgaacatc atctcccgga aataatagct ccaccaataa
     1741 tctacgtttt gcaaataacc cgcaccgtgt acaaaaatta ctgcggcatt gttttttgtt
     1801 ccggcttttg gttcatacac ccgagcata
//
LOCUS       DASQJI010000374         7851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_349767,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000374 DASQJI010000000
VERSION     DASQJI010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7851
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349767"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VEV83_10515"
     CDS             <1..547
                     /locus_tag="VEV83_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-glucuronidase"
                     /protein_id="HYK45591.1"
                     /translation="GYSHHYGPAPWYNSAPRADWNPTYFHKADAVGIGFDRTSRGSNA
                     LAQYAPEVRKQLEDERTCDERFLLWFHHVPWDFTMKSGKSLWDELCRKYYAGVNSVRW
                     MQSAWDHLKGSIDDERFEQVKILLSIQEKEAVWWRNACVLYFQTFSNRQISPDLEKPA
                     ASLDYYEHLQFPYAPGIGGNQ"
     gene            885..3581
                     /locus_tag="VEV83_10520"
     CDS             885..3581
                     /locus_tag="VEV83_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /protein_id="HYK45592.1"
                     /translation="MKKCIPFFIGTMISFTSSAQLKVQSLLTENLTDPIALGVTQPRF
                     SWQLMSDKRNTMQVAYEVEVTLDKSGVWSSGKVNADSSVHVAYKGSSLQSDKKYSWHV
                     RVWDNHGNSSAWSETANFQMGLLNVADWKAKWIEPGYPEDSILRPSPLFRKEFLLNKK
                     VVSATAYITAHGLYEAQINGRRIGDAYLMPGWTSYKTRLQYQAYDVTALLKDGVNAVG
                     VTLGSGWYRGTIGYTNSKNVYGKDIALLFQLNIVYSDGSTDLVWSNDTWKSSTGSIRS
                     SEIYNGETIDARLHKMGFSSPGYNDADWSGVKLADFSFDNLIATYNEPVKKHETFQPV
                     RILTTPKGEHVIDFGQNLVGWVVLKVKGNAGDTIKVSHAEVLDKEGNFYTENLRKAKA
                     EDIYILKGGTQETFEPHFTWHGFQFVKVEGYPGEMSPENFTAVALYSDMKETGTFTSS
                     NPLINQLQHNIQWGQRGNFLDVPTDCPQRDERLGWTGDAQVFSRTASFNMNVNNFMAK
                     WLKDVKADQRNGVVPFVIPNVLGGATSSAGWADCATIIPWNMYLAYGDKRILEDQYSS
                     MKAYVESIRKVAKNDLWNTGFHFGDWLFYRPDDDNDGRAAVTDKYLIAQCFYANSTQL
                     LINAAKVLGKTDDVSEYSALLQKIKKAYLKEYMTPNGRLVSGTQTAYVLALNFDMLPD
                     SLRAQAAQRLVDNISSYRNHLTTGFLGTPYLCHVLTRFGHDDVAYKLLLQDTYPSWLY
                     PVKMGATTIWERWDGQKPDSSFENPGMNSFNHYSYGAIGDWMYRRMVGLDTYEDGVGY
                     KHIKIQPHIGGGFTSAIAKLQTYYGQLSNEWKINNGEITMNVEVPPNTIADVFVPAVN
                     AANVSESGKPLSSTADIKVVGSADGYVQLELGSGIYHFTSKK"
     gene            complement(3582..3764)
                     /locus_tag="VEV83_10525"
     CDS             complement(3582..3764)
                     /locus_tag="VEV83_10525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45593.1"
                     /translation="MKKAVKETPKTSSSSKKKNTRPHTTKETGYKEDVFNAEEQRNYD
                     KTDVAKNKKNTMGPRS"
     gene            complement(3793..4185)
                     /locus_tag="VEV83_10530"
     CDS             complement(3793..4185)
                     /locus_tag="VEV83_10530"
                     /inference="COORDINATES: protein motif:HMM:NF015720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPW repeat protein"
                     /protein_id="HYK45594.1"
                     /translation="MRFIPTKVHGVMDYLYALVLLFIPNIFHFSSNDAPTYVMDVVSS
                     AVFTYSLFTKYELGLFKNIPMHVHLILDLVFGVLLAASPWIFGFADDVYKPHLFFGLF
                     AIAAASFSKVTSRQIEKSTYSQESSTPA"
     gene            complement(4240..5637)
                     /locus_tag="VEV83_10535"
     CDS             complement(4240..5637)
                     /locus_tag="VEV83_10535"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HYK45595.1"
                     /translation="MKSQVFQIASFALGEHDRSLSAHLDQLKIHLLDSLGSCIFAFRQ
                     ATIEKLKKQIESLSNERIASLNFPGSIDRAAQFYTALIRYPDFMDNYLGKEATCHPSD
                     NIGALLAAGHAMNISGKEFLTAMGIAYEIECRLVEEVPVMIKGFDHTVLLAYSITAAV
                     SRVLRLTEQQAANAIGIAGCTFNPLVTSRASYTTEWKGFASSMVALGCTNVVMLAKED
                     MTGPVGLFEMPEKGFPDIFGMKLEYDWSKENFVLIRKCILKNYNAEVHTQPAIEAALE
                     LKQQYTFTVNDIEEINVTTFLTAYHIVGGGEYGDRMNVHSKEQADHSMPYLIAVALLD
                     DDVYPAQLTQERIKRNDVQELLKKVKVKINFPVHQPVKVVGVVDKYTAAYPDKVYSEV
                     TITLKDGKKLVCEKPDYKGFHTRPFSWNDVIEKFKRLTKGCIDDETSEKIIVTVREFE
                     QYSVNDLINELQKIH"
     gene            complement(5701..6435)
                     /locus_tag="VEV83_10540"
     CDS             complement(5701..6435)
                     /locus_tag="VEV83_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4290 domain-containing protein"
                     /protein_id="HYK45596.1"
                     /translation="MQYNTTRSDMSMREYGRHIQKMVEYLLTIEDKEKRQEQAHSVIE
                     LMGFLNPHLKNVEDFRHKLWDHLFFISDFKLQVDSPYPIPQKETYKLKPDPLPYPKRH
                     PKYSHLGKNLELVIDKALAEEDPEKKAGFANAIAYYMKLAYSNWHKELVHDDAIRSEL
                     DNITGGELEFSNTPFIKHRPPAFERDDYRSGGGRRQNFGSRNGGNRDRDNRNRPGNGG
                     GNRDGRNRNQRDSRDNRNQGYKKRFK"
     gene            6636..7253
                     /locus_tag="VEV83_10545"
     CDS             6636..7253
                     /locus_tag="VEV83_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYK45597.1"
                     /translation="MVKQKKSLSTEQKILETARKVFLTRGMVGARMQDIADEAGINKA
                     MLHYYFRDKDKLFETVFLEEAQKFFPKIKMIFESEQTLEEKIRRFVDEYINEMLENPY
                     LPWFVMNEINRDPDRFMQKIWSKKEAPDPSNFLAQVEKEVRKGTIKKISPLHLLMNLL
                     SMTIFPFIARPMILRNLHLDEMQFRAAMEQRKKEIPAFLMAAIRK"
     gene            7299..>7851
                     /locus_tag="VEV83_10550"
     CDS             7299..>7851
                     /locus_tag="VEV83_10550"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK45598.1"
                     /translation="MKKWMFIFLFTGGKLFSQSFTLDEVNALARQNYPVIRQQDLINR
                     TRDISVDNLGKRFLPQVTFSGQATYQSEVTNITFPASGIKIEPLSRDQYKAVADVNQL
                     VYDGGVIKQQKAVQELTADVQQRQVDVELYQLQDRINQLYLSVLFLDEQLKQAELVKN
                     DLKTGIKSVEAQVNNGVAFRSNLN"
BASE COUNT         2164 a         1683 c         1838 g         2166 t
ORIGIN      
        1 gggatacagc caccattatg gccccgcgcc gtggtacaac agtgcgccgc gtgcagactg
       61 gaatcctact tactttcata aggcagacgc tgtgggaatt ggatttgaca ggacttcccg
      121 cggaagcaat gcgctcgcgc aatatgcgcc tgaagtgcgc aaacaattgg aagacgaacg
      181 cacatgcgac gaaagatttt tattgtggtt tcatcatgtg ccatgggatt ttacaatgaa
      241 gtccggaaaa agcttatggg atgaattgtg ccggaagtat tatgccggtg tcaattcagt
      301 aagatggatg caaagtgcat gggaccattt aaaaggcagc atcgatgatg agcgttttga
      361 acaggtgaaa atcttattga gcatacagga aaaagaagcg gtttggtggc gcaatgcctg
      421 cgtcctttat tttcaaactt tctctaacag gcaaatttct ccagatcttg aaaaacccgc
      481 tgctagctta gattattacg aacatcttca gttcccgtat gcacccggca ttggaggaaa
      541 tcaatagtca atcttaaggc gcttcttgtt tcagatctca acctggcact tcatttaaat
      601 aaactttgtc gcgcaaacgt gcagtttgcc gcaaacggta cgccgttccg aaaaatggcc
      661 cgataaataa atatcgcctc ttcaattcga cgaaaagtat gtaagagtca cgcgctccaa
      721 tcttagggcc gttctggcta gtcgtgtact tcgtgtcccc aaaacgataa agcgagcacg
      781 tgcagaacac ttcatcaaat gattctttta ttttttggtt tcgaatttta tcttgcgtta
      841 agtctcctga ccggatggtc tctgaattgt ttaaaagcat tgccatgaaa aaatgtattc
      901 ctttttttat cggtaccatg atatcgttca cttcttcggc gcaattgaaa gttcaaagcc
      961 tgctcacaga aaatcttaca gatcctatcg ctcttggagt gacgcagccg cgtttcagct
     1021 ggcagttgat gagtgataaa aggaatacga tgcaggtagc ctacgaggtt gaggtgacgt
     1081 tggataaatc aggggtgtgg agcagcggca aggttaacgc tgattcatct gttcatgttg
     1141 catataaggg ttcgtcattg cagagcgata aaaaatattc ctggcatgta agggtttggg
     1201 ataatcacgg caacagcagc gcatggagtg aaacagcaaa ttttcaaatg ggattattga
     1261 atgtagctga ctggaaagca aaatggatcg agcccgggta tccagaagat tctattcttc
     1321 ggcccagccc gctattcaga aaagaatttt tattaaacaa gaaagtggtc tcggccactg
     1381 catacatcac agcacatggg ttgtatgaag cacaaattaa tggtcgccga attggcgacg
     1441 catatctcat gcccggctgg acaagctaca aaaccaggtt gcaataccag gcttacgacg
     1501 taaccgcttt gctgaaagac ggcgtcaacg cggttggcgt aacgcttggc agcggatggt
     1561 atcgcggcac gattgggtac acgaatagca aaaatgtcta cggaaaagat atcgccttat
     1621 tatttcaatt gaacattgtt tatagcgatg gctcgactga tcttgtttgg tcgaatgata
     1681 cgtggaaatc atcgacaggt tcaatccgaa gttcagagat ttataatggt gagacgatcg
     1741 acgcgcgttt gcacaagatg ggcttttcct ctcctggtta taacgatgca gattggagtg
     1801 gcgtaaagct ggctgatttt tcttttgaca atttaatagc gacctataat gagcctgtaa
     1861 aaaagcatga aacttttcag ccggtgagaa ttcttacgac tcccaaaggc gagcatgtta
     1921 tcgacttcgg gcaaaatctt gtcggttggg ttgtgcttaa agtgaaaggc aacgcaggag
     1981 atacaatcaa ggtttctcat gctgaagtgc tggataagga aggaaatttt tacaccgaaa
     2041 atcttcgcaa ggcgaaagca gaagacatct acattctaaa gggcggaact caggaaacat
     2101 tcgagccgca ttttacctgg cacggattcc agtttgtcaa ggtggaaggt tatccgggag
     2161 aaatgagtcc cgaaaatttc acggccgtcg ctttgtattc cgatatgaaa gaaacgggaa
     2221 cgttcacttc atcgaaccca ctcatcaatc aacttcaaca caacatccaa tgggggcaac
     2281 gagggaattt tttagatgtg cccactgact gtccgcagcg cgatgaacgg cttggatgga
     2341 caggcgatgc gcaggtattt tcacgcaccg catcgttcaa tatgaacgta aataatttca
     2401 tggcgaaatg gctaaaagac gtgaaggcag atcaaagaaa tggggtcgtg cctttcgtaa
     2461 ttccaaatgt gttgggcgga gcgacgagca gtgccggatg ggcagattgt gcaacgataa
     2521 ttccatggaa catgtacctc gcttatggtg acaaaagaat tttggaagac cagtacagta
     2581 gcatgaaggc ctacgtagaa agcattcgca aagttgctaa gaatgatctt tggaacaccg
     2641 gcttccattt cggcgattgg ttattctatc ggcctgatga tgacaacgat ggcagggctg
     2701 cggtaacaga taaatatttg atcgctcagt gtttttatgc gaattcaact cagctcctga
     2761 taaacgcggc aaaagtttta ggcaaaaccg atgatgtttc tgaatactct gctttattac
     2821 aaaagataaa aaaggcatat ctcaaagaat acatgacacc aaatggtcgc cttgtttcag
     2881 gcacgcaaac cgcttacgtt cttgcactga actttgacat gcttccggat tcgttgcgag
     2941 cacaggctgc gcaacggctg gtggataaca tcagtagtta ccggaatcat ttaacgaccg
     3001 gcttcctcgg gacaccttat ttatgtcatg tcctgacgcg ttttggtcac gatgatgttg
     3061 catataaatt attgctgcag gatacctatc cttcatggct ttacccggta aaaatgggtg
     3121 ccactacaat ttgggaaagg tgggacggcc agaagcctga cagcagcttc gagaatccag
     3181 gcatgaattc attcaaccat tattcatacg gtgcgattgg cgattggatg tacaggcgaa
     3241 tggttgggct cgacacttat gaggatgggg ttggatacaa acacattaaa atacaaccgc
     3301 acattggcgg cggcttcacg agcgccattg caaagctcca gacatattac ggccagttga
     3361 gcaatgaatg gaaaataaac aatggtgaaa taaccatgaa cgtcgaagta ccaccaaaca
     3421 caattgcaga tgtgtttgtg ccggccgtaa atgcggctaa cgtttctgaa agtggcaaac
     3481 ccttgtcttc aacagccgac ataaaagttg ttggttcagc cgatgggtat gttcaactgg
     3541 agttgggttc gggtatttat catttcacat cgaagaaatg atcacgacct tggccccata
     3601 gtattttttt tgttttttgc tacgtcggtc ttgtcataat ttctttgctc ttcagcattg
     3661 aaaacatctt ctttataacc tgtctctttc gtggtatgcg gccgcgtatt tttctttttt
     3721 gatgatgagc tggtttttgg agtttctttc actgcctttt tcataagtat ttttctttaa
     3781 gcgaagcaat tattacgccg gcgtagagct ttcctgcgaa taagtgcttt tttcaatttg
     3841 ccgggaagtt actttggaaa acgacgccgc agcgatcgcg aaaagcccga aaaacaaatg
     3901 cggtttgtaa acatcgtctg caaatccaaa tatccacggt gatgccgcca gcaaaacgcc
     3961 aaagaccaaa tccagaatta aatgtacatg catggggatg tttttaaata atccgagctc
     4021 atattttgtg aagaggctat aagtgaatac ggcggatgac acgacatcca tcacatatgt
     4081 cggcgcatca tttgaactga agtgaaaaat gtttggaatg aagaggagga ctaaagcata
     4141 caggtaatcc atcactccat gcacttttgt tggaatgaat cgcataggtc agctttaagg
     4201 atcttaaaac aaaaaatatg cccgcactaa attataagat cagtggatct tttgcagctc
     4261 gttaattaga tcattcacac tatactgttc aaattcccgg actgtcacga taattttttc
     4321 tgacgtttca tcgtcaatgc aacccttcgt taagcgttta aatttttcga tcacgtcgtt
     4381 ccatgaaaat ggccgcgtat gaaaaccttt gtaatccggt ttctcgcaca ccaatttctt
     4441 tccatctttg agagtaatag ttacttcgga gtacacttta tccggataag ccgccgtgta
     4501 tttatctact actccaacca ctttaaccgg ctggtgcacg ggaaaattta ttttcacctt
     4561 tacttttttc agcagttcct gcacgtcatt ccgtttaatt cgttcctgag tcaactgcgc
     4621 ggggtaaacg tcatcgtcca gcaatgcaac agcgatcagg taaggcatac tatggtctgc
     4681 ctgttctttg ctgtgaacat tcattctgtc cccgtattca cctcctccaa cgatgtggta
     4741 agcagtaaga aaggtagtga cgttgatctc ttcaatgtcg ttgacggtga atgtgtattg
     4801 ttgtttgagc tcgagcgctg cttcgatcgc gggttgagta tgcacttccg cattgtaatt
     4861 ctttaaaata cattttcgga tcagcacaaa attttccttt gaccagtcgt attcgagctt
     4921 catgccgaat atatccggaa aacctttctc cggcatttca aaaaggccaa caggtcccgt
     4981 catatcttct ttagcaagca tgacaacatt cgtgcatccg agtgcaacca tcgacgacgc
     5041 aaatcctttc cattctgttg tatacgaagc acgcgaagta accagtgggt tgaatgtaca
     5101 accggcaatg ccaattgcat tggcagcttg ttgctctgtc agccgaagta ctcttgacac
     5161 tgcggccgtg atcgaatatg caagtaatac agtgtgatcg aaacctttga tcattacagg
     5221 aacttcttcc accagccggc attcaatttc atacgcaatc cccatagcgg ttaaaaattc
     5281 tttaccggaa atattcattg catgcccggc ggccagcaaa gccccgatat tatcgcttgg
     5341 atggcacgtg gcctctttgc caagataatt gtccatgaaa tccgggtacc ggatcagtgc
     5401 agtgtagaat tgggctgccc ggtcgatact gcccgggaag tttaagctag cgatcctttc
     5461 gtttgataaa gattcgatct gcttttttag cttctcaatg gtggcttgcc tgaacgcaaa
     5521 gatgcacgaa cccagggagt caagaagatg aattttgagc tggtcgagat gcgcggacaa
     5581 cgatcgatcg tgttccccaa gtgcaaagct ggctatttga aatacctgtg acttcacttt
     5641 ttatatataa taaaaaatgg agccagactg ttgtcagtgg ccaactcgtc ttaaaataaa
     5701 ttatttaaac cgcttcttgt aaccctggtt ccggttgtcg cggctgtctc gttgattgcg
     5761 gttgcggcca tcgcggttac cgccgccatt tcccggacga ttccggttat cacggtcgcg
     5821 gttgcctccg ttacggctgc cgaagttttg acggcgaccc ccgccgctgc gatagtcatc
     5881 gcgctcaaat gcaggcggcc gatgcttaat aaaaggtgta ttgctaaatt caagttcgcc
     5941 gccggttata ttgtcaagtt cgctgcggat ggcatcatca tgcaccaact ccttatgcca
     6001 gttgctgtaa gcaagcttca tgtaataagc tatcgcattc gcaaagccag ccttcttttc
     6061 aggatcttcc tctgcaagcg ccttgtcaat aaccagttcg agattcttgc caaggtgaga
     6121 atattttggg tgacgtttcg gatacggcaa tggatccggt tttagtttat aggtttcctt
     6181 ttgtggaatg ggataagggc tatctacctg gagcttaaaa tcgctgataa aaaacaggtg
     6241 gtcccagagc ttatgccgga aatcttccac attttttaaa tgcgggttta aaaaacccat
     6301 cagttcgatc actgaatgcg cctgctcctg gcgtttttct ttgtcttcta tggtcagcag
     6361 gtattccacc attttctgga tgtgccggcc atattcacgc atgctcatgt cgctgcgtgt
     6421 tgtgttgtat tgcatcaaaa taaaaagatt gaagcgacaa atgtacccct aaatgcttaa
     6481 cgggcaaatt tcaaattgtg aaagccaatc tgggttcagg gcttgatgct tgcaggctgc
     6541 cctatgtttg gaggggaaat agttcaatca tttaattttt ttttttggcg gtgaccgtaa
     6601 tcggcctact tttgtcaacc atttggttaa actatatggt taaacaaaag aaaagcctca
     6661 gcaccgaaca gaaaatattg gaaaccgcac gcaaggtttt tttaacgcgc ggcatggtgg
     6721 gggccaggat gcaggacatt gctgatgagg cgggtatcaa caaggccatg ttgcattatt
     6781 attttcgtga caaggataaa ttgtttgaaa ccgttttcct ggaagaagcg cagaagttct
     6841 ttccaaagat caagatgata tttgagagcg aacaaacact cgaagagaag atccggcgat
     6901 ttgtagatga atacattaat gaaatgcttg agaatcccta tttgccatgg tttgttatga
     6961 acgagatcaa tagggatccc gaccggttca tgcaaaagat ctggagcaag aaagaggcgc
     7021 cggatccgtc taatttcctt gcgcaggttg aaaaagaagt gcggaagggg acgattaaaa
     7081 agatcagccc tctccatcta cttatgaacc tgctttcgat gacgatattc cctttcatcg
     7141 ccaggccgat gatcctgcgt aacctgcacc tggatgaaat gcaatttcgt gcggcgatgg
     7201 agcagcgaaa gaaagaaata ccggcgttcc tgatggcggc gattagaaaa taattttttt
     7261 tgagttatga ttaaccaact ggttaaacca acaagtttat gaagaaatgg atgttcatct
     7321 ttttattcac cggcggaaaa ctttttagcc agtcatttac actagacgaa gtaaatgccc
     7381 tggcgcgaca gaattatcct gtgatcaggc agcaggacct cataaaccgc acacgtgata
     7441 tttccgttga caaccttggg aaacgtttct tgccgcaggt tactttcagc ggacaggcca
     7501 cataccagtc cgaggttacg aacattacat ttcctgcttc cggtattaag atcgagccgc
     7561 tgagccgcga ccaatataag gctgtggctg atgtaaatca acttgtgtat gacggcggcg
     7621 tcataaaaca gcaaaaggcg gtgcaggagc taacggcaga tgtgcagcaa aggcaggttg
     7681 atgtagagtt atatcaactg caggatcgca tcaaccaatt gtatttaagt gtcctctttc
     7741 tcgatgagca attgaagcaa gccgaattgg taaagaatga cttgaaaacc gggatcaagt
     7801 ctgtagaagc gcaggtaaat aacggcgtcg cattcaggtc aaatttgaat t
//
LOCUS       DASQJI010000375         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_196220,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000375 DASQJI010000000
VERSION     DASQJI010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196220"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VEV83_10555"
     CDS             <1..460
                     /locus_tag="VEV83_10555"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45599.1"
                     /translation="SPDLIHWTPLQNDNAHSTDYDSLYSKYNVSKLKIAVPTRKGKFD
                     CDLVESGPPAMLTDKGILLIYNSRNSSATGDTGLPEGTYTVAQLVLDKNDPSKIVDRM
                     DSYFMKPEQPYEFSGEVNNVCFAEGLAFYKNKWWLYYGTADSKIAVAVKN"
     gene            470..1402
                     /locus_tag="VEV83_10560"
     CDS             470..1402
                     /locus_tag="VEV83_10560"
                     /inference="COORDINATES: protein motif:HMM:NF013431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HYK45600.1"
                     /translation="MTFSFYSDDTDIFPVFRLRNNETQTEAVVYSFGGLLNAFIVNGQ
                     NVVDGFSSCRDAKENITNGFKSCKLSPFVCRLPQGKYMFNDREYTTGKFFLGKEAIHG
                     LIYDCLFEVTDSGADEKSAFVSMQYKYTKKDEGFPFSYECAITYKLQDGNRLSVVTEV
                     TNMSNDKMPLSDGWHPYFTLGNSVNDLQVQINTNKLLEFDDRLVPTGKILSYNKFQQP
                     ELFGDTFLDNCFILSDHNNPACILKNKTLQLSILPDASYPYLQIYAPPHRKSIAIENL
                     SSAPNAFNNKIGLIVLQPGERKKFYTSFQVQSIE"
     gene            complement(1405..1791)
                     /locus_tag="VEV83_10565"
     CDS             complement(1405..1791)
                     /locus_tag="VEV83_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HYK45601.1"
                     /translation="MPKQIVHTEKAPAPIGPYSQAVKAGEFLFISGQVAIDPANGELI
                     SGTVAEETHRVMKNLEAILHAAYLTFNHVVKTTIFLSDMSLFAEMNNVYSTYFNGDYP
                     ARETVAVKGLPKNVNVEISMIGCVSI"
BASE COUNT          589 a          403 c          421 g          584 t
ORIGIN      
        1 gtctcctgat cttatacatt ggacgccact gcaaaatgac aacgcacatt ccacggatta
       61 cgactcacta tactcaaagt ataatgtctc gaaattaaaa attgcagtac ccacaagaaa
      121 aggaaagttc gactgcgatc ttgttgaaag cggcccaccg gctatgctca ccgacaaggg
      181 catattattg atctataaca gccgcaatag ttcggcgaca ggagacaccg gtttaccgga
      241 gggaacttat acagtcgcac aacttgtgct tgataaaaac gacccatcga aaattgttga
      301 cagaatggat agctacttca tgaaacccga acaaccatat gaatttagtg gtgaagtgaa
      361 taatgtttgt ttcgcggaag gattggcttt ttataaaaac aaatggtggt tgtattatgg
      421 cacggcggat tcgaagattg cggtggcggt aaaaaattaa tcagctcata tgaccttttc
      481 gttttacagc gatgacacgg atatttttcc ggtttttcgg cttcgaaata atgaaacgca
      541 aacggaagct gttgtgtatt cttttggcgg cttgttgaat gcttttatcg tgaacggcca
      601 aaatgtagtt gatggtttta gttcctgccg cgatgcaaaa gaaaatataa ccaatggctt
      661 taaaagttgt aagctgagtc cttttgtttg ccggctcccg cagggaaaat acatgttcaa
      721 tgaccgggaa tatactaccg gaaaattctt tttaggtaaa gaagcgattc atggattaat
      781 atatgattgt ttatttgaag ttaccgactc cggcgctgat gaaaagagtg cgtttgtgtc
      841 catgcaatat aaatacacaa aaaaagatga agggttccct ttttcttatg aatgcgcgat
      901 cacttacaaa cttcaagacg gaaatagact ttcagtcgtt acagaagtta cgaacatgtc
      961 aaatgataaa atgccgttga gcgatggctg gcatccgtat ttcacattgg gaaattcagt
     1021 gaatgatctt caggtgcaga tcaacacgaa caaattgctg gagtttgatg atcgactcgt
     1081 gccgacagga aagatacttt catacaataa atttcaacag ccggagctat ttggcgatac
     1141 gtttctggat aattgtttta ttctttcgga tcacaataat ccagcctgta tcttaaaaaa
     1201 taagacgctt cagcttagca tactgcccga cgcatcctat ccttatttgc agatatatgc
     1261 accgccacac agaaaaagca tcgcaatcga aaatctgagc agtgcaccga atgcttttaa
     1321 taataagatc gggttgatcg ttttgcaacc aggcgagcga aaaaaatttt acacatcctt
     1381 ccaggtgcag tcgattgagt aaggttatat gcttacgcaa ccgatcatgc tgatctccac
     1441 atttacattt tttggtaagc cttttaccgc aacagtttcc cgtgccggat agtcgccatt
     1501 aaagtacgtg ctgtacacat tgttcatttc agcaaacaaa ctcatgtcgc ttaagaaaat
     1561 ggttgtcttt accacatggt tgaatgtgag atatgccgca tgcaaaattg cttcaaggtt
     1621 tttcatgaca cgatgtgttt cttcagccac ggtgccgctg atgagttctc cgttggcggg
     1681 atcaattgcg acttgtccgc taataaacaa gaattctccg gcttttacgg cctggctgta
     1741 tggcccaatc ggcgccggag ctttttcagt atgaactatt tgttttggca taatttattt
     1801 tttgtcattt tatttctcac agatgacaca gatgtgcaca gaaaaaattt cagaataaat
     1861 ttttatttat cacagctacg atgcccgcaa cttcgcaaaa cagctgtcga acgcgcgctc
     1921 acttgtgaga gaacagcaag ttgcattatt tccttcattc atacaagcta tttttgcgtg
     1981 ttaaacggca gagatgc
//
LOCUS       DASQJI010000376         2443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1116369,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000376 DASQJI010000000
VERSION     DASQJI010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116369"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VEV83_10570"
     CDS             complement(<1..285)
                     /locus_tag="VEV83_10570"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HYK45602.1"
                     /translation="MNNEINNASKNPTAPNEKGFRIKVCGLTNAQQVRQLNDAGVEFA
                     GFNFYPRSPRYVYKHLPSHTIKRLGGKINKVGIFVNEDPDTVLKIVDDCGL"
     gene            complement(282..1097)
                     /gene="trpC"
                     /locus_tag="VEV83_10575"
     CDS             complement(282..1097)
                     /gene="trpC"
                     /locus_tag="VEV83_10575"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HYK45603.1"
                     /translation="MNILEKIIAQKRKEVAEKKRSTDIDSLISMSTAFERKCFSLKDA
                     LTGDGATGVIAEFKRRSPSKGWIHEGISISEVVPFYESNGATAISVLTDTEFFGGDIE
                     ELKSARAKVGIPLLRKDFMVDEYQLYEAKSYGADVILLIAACLSNDEARNLARKAKEL
                     GLETLLEVHAEEELDHVTDEIDIIGVNNRNLGTFETDIKTSMRLIKYMPGDKPVISES
                     GICDVDTILKLRDAGFKGFLIGETFMKEKSPAIAFADFMKSLEKGSKLIQHSK"
     gene            complement(1094..2086)
                     /gene="trpD"
                     /locus_tag="VEV83_10580"
     CDS             complement(1094..2086)
                     /gene="trpD"
                     /locus_tag="VEV83_10580"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HYK45604.1"
                     /translation="MKKILQYLFEHKTLSKEAAKEILLSISKGTYSEYEVTAFITVFL
                     MRSITIEELQGFRDALLELCVKVDLNGYKTMDIVGTGGDGKNTFNISTLACFIVAGAG
                     QKVAKHGNYGASSISGASNVMEQLGYKFKNDNSQLKREIEEANICFMHAPLFHPALKT
                     VAPIRKNLGIRTFFNMLGPMVNPAAPDFQLVGVYNLEMARIYNYLLQQTGKAFTIIHG
                     LDGYDEISLTNDTKVITNNGEQLKTPEELGKRFVEPQSIHGGNSAEEAAKIFLKIIKG
                     DGTWAQNAVVLANAAMALQCTGAYDQYEDAYHAAVESLETGKALNSLEKLISLQ"
     gene            complement(2149..>2443)
                     /locus_tag="VEV83_10585"
     CDS             complement(2149..>2443)
                     /locus_tag="VEV83_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588215.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HYK45605.1"
                     /translation="ANEEKNASRKICYSTSSLFEGLPETFPAGRYHSWIVSKENFPAE
                     LEITAEDENGYIMAAQHKTYDVQGVQFHPESVLTPLGEKIMRNWLKPPSPKGE"
BASE COUNT          589 a          620 c          479 g          755 t
ORIGIN      
        1 gaggccgcag tcatcaacga ttttcaagac cgtgtccgga tcttcgttca caaaaattcc
       61 caccttgttt attttaccgc ccaatctttt tatcgtgtgc gacggcaggt gtttgtacac
      121 atatcgtggc gaccgcggat agaaattgaa gcccgcaaac tcaaccccgg catcattcaa
      181 ctggcgcacc tgctgggcgt ttgtgagccc acacactttg atgcgaaacc ctttctcgtt
      241 gggagcggtc ggatttttcg aagcattgtt gatctcgtta ttcatttcga atgctgaatt
      301 aatttacttc ccttctccag ggatttcata aaatcagcaa aggcaatcgc aggactcttt
      361 tctttcatga aagtttcgcc aatcaggaaa cctttaaaac cagcatcgcg cagcttcagg
      421 atggtatcca catcgcaaat gccgctctct gaaattacgg gcttatcgcc gggcatgtat
      481 ttgatcagcc tcatcgaagt ttttatatcc gtctcaaatg ttcccaggtt acgattattg
      541 acgccgatga tatcgatctc gtcagttaca tgatcaagtt cttcttcagc atgcacttcc
      601 aacaacgtct ccaggcctaa ttccttggcc tttcgcgcca agtttcttgc ctcgtcgttg
      661 gacaaacaag cggcaatgag taatatcaca tctgctccgt aacttttcgc ttcgtataat
      721 tggtattcat ccaccataaa atctttcctc aacaaaggga ttccgacctt tgctcttgct
      781 gattttaatt cttcgatatc acctccaaag aattctgtat cagttaaaac ggaaatagcg
      841 gttgcgccat tcgattcata aaacggtacc acttcagaga tcgatatgcc ctcatggatc
      901 catcccttcg aaggcgaccg acgcttaaac tctgcgatca cgcccgtcgc gccatccccc
      961 gtcaatgcgt ctttcagcga aaagcatttt ctttcaaaag ccgtcgacat agatataagc
     1021 gagtcaatat ctgtgcttcg ttttttctcg gcaacttctt ttcttttctg cgctattatc
     1081 ttctctagaa tgttcattgc aggctgatca gtttttccag tgagtttaac gctttaccgg
     1141 tttcaagact ttcaacagca gcatggtaag catcttcata ctgatcgtat gcgccggtac
     1201 attgcaaagc catcgctgcg ttggcaagca caacagcgtt ttgtgcccag gtgccgtcgc
     1261 cctttattat tttcaaaaat atttttgccg cttcttccgc actattaccg ccatgaatgc
     1321 tctgtggttc tacaaaacgt ttacccaatt cttcaggtgt ctttaattgc tcaccgttgt
     1381 tagtgatcac ttttgtatcg tttgtcaacg aaatttcatc ataaccatcg agcccatgaa
     1441 tgatcgtaaa agctttacca gtttgttgca acaggtaatt ataaattctt gccatttcga
     1501 gattgtacac gccgacaagc tggaagtccg gagccgcggg attcaccata gggcccagca
     1561 tgttgaagaa agtccttatg ccaaggtttt ttcggatagg agccacagtc tttaacgccg
     1621 ggtgaaacaa gggtgcatgc atgaaacaaa tattcgcttc ctcaatttcc cgtttcaact
     1681 gactgttatc attcttgaat ttgtagccga gttgctccat tacatttgat gcaccactga
     1741 tcgatgaggc gccgtagttc ccgtgtttcg ctaccttttg cccggcgcct gccacgataa
     1801 agcatgcaag cgtggaaata ttaaaagtgt tttttccatc gccaccagtg ccgacgatgt
     1861 ccatcgtttt gtatccgttc agatcaactt ttacgcaaag ctcaagcaac gcatcgcgaa
     1921 acccctggag ttcttcgatc gtgatgctgc gcataagaaa aacagtgatg aacgccgtta
     1981 cttcgtattc actgtacgtt cctttactaa tgcttagcaa gatttctttc gccgcttctt
     2041 ttgaaagcgt tttgtgctcg aataaatatt gtaggatctt tttcatgccc ctaaccccta
     2101 aaggggaatt tttatgagtg tatataattt cattgtctcg aatgcccttc actccccttt
     2161 aggggacggg ggcttcaacc aattcctcat gatcttttct ccaagcggcg ttaatacgct
     2221 ttcaggatga aactgcacac cctgcacatc gtatgtttta tgttgcgctg ccatgatgta
     2281 tccgttctca tcttccgctg tgatctctaa ttcagcagga aaattttctt tgctcacgat
     2341 ccatgaatga tatcgccccg ccggaaatgt ttcgggcaaa ccctcgaaca agctgctcgt
     2401 ggaataacaa atctttcgag atgcattttt ttcttcattg gcc
//
LOCUS       DASQJI010000377         7216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2500263,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000377 DASQJI010000000
VERSION     DASQJI010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7216
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500263"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1471
                     /locus_tag="VEV83_10590"
     CDS             134..1471
                     /locus_tag="VEV83_10590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HYK45606.1"
                     /translation="MQLRVEISNRQILRIALPIAVSILVPNINFITNNVFLGHLNEQA
                     LAIAGITGVYYLVFGVIGFGLSSGLQALMSRRAGEDRVEEIGLLFLQAVRIAIAFAIG
                     GILITWFLAPLVLRASLHSEQDVQMAISFLRIRIWGLPFLYIYQMRNALLISINQSRY
                     LIIGTLAETIANIFFDYALIFGHFGLPVLGFNGAAIASIIAEITGLLTIFSLIHLKGI
                     GKQVQLFRTKKLDRVATRLILQQSAPIVLQFALSTASWEFFYILIEHHGTQPLAISNV
                     MRNLFGIFGCFAWSFASASNSMVSNIIGQKLQHRVKELVVKIMKIALLFSASVALLIN
                     AFTRFFLSAYGQSESFIIAAIPVARIISIALILQSVSVVWLNAVVGTGNSKRNLITEL
                     IAITVYCFYVYFILEYFHLSISLGWMSEWIYWIALFVPSYWYIQSNKWMGTKI"
     gene            complement(1587..2159)
                     /locus_tag="VEV83_10595"
     CDS             complement(1587..2159)
                     /locus_tag="VEV83_10595"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HYK45607.1"
                     /translation="MAAGASERLGEPKQLLMHKGSSLLKHAVTEAVRSNAEQVIVVLG
                     ANADIIVNELDENEAHIVINTGWEEGMASSVRTGINALLEISAAVDAAILMPCDQPYV
                     SASLLNELISKQEETGKRIIACDYGEALGPPSLFQKDLFSELLMLEGDAGARKIIEKH
                     GDDVATVLFRKGSVDIDTKDDYEALNSLLS"
     gene            complement(2215..3369)
                     /locus_tag="VEV83_10600"
     CDS             complement(2215..3369)
                     /locus_tag="VEV83_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC/CoxI family protein"
                     /protein_id="HYK45608.1"
                     /translation="MKEIRDIIKAFEEAQRLGKQTALATVVHVEGSSYRRPGARMLIT
                     EDGQLTGMISGGCLEGDALRKALLVMMEKKSKLVTYDTMDDDDAKFGVGLGCNGIIQV
                     LIEPISSDDPNNPIAFLKAIDEKRQKTVLVTLFSLESKKDPQYGTCLLLQEDKAIVGS
                     PPILQEILIADANDALLNEVSSFKNYVSKDYAVTAFIEAISPPVALVIIGAGNDVIPL
                     VRMAEILGWEVTVTDGRPDLANNERFSTSCQVLVSNPESALEKINIDQQTVFVLMTHN
                     YNYDKVLLSQLVKKDLRYIGMLGPKKKLQRMLGELKEEGVVVTEEQLSVVHSPVGLDI
                     GAETAEEIAVSILAEIKAAFSGRNLQPLRNKEMIHPRASTVIEEVKISKT"
     gene            3474..3950
                     /locus_tag="VEV83_10605"
     CDS             3474..3950
                     /locus_tag="VEV83_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYK45609.1"
                     /translation="MESYSLSINGKTYNVQADPQMPLLWAIRELAGLPGTKYGCGMAQ
                     CGACTVHLNGTAVRSCQVKVSAAAQQSITTIEGLSNDNSHPVQKAWLAEQVPQCGYCQ
                     SGQIMSAVALLKKNPNPTDKDIDSAMAGNICRCGTYPRIRKAIKAAAQMMANAPTN"
     gene            3963..6128
                     /locus_tag="VEV83_10610"
     CDS             3963..6128
                     /locus_tag="VEV83_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HYK45610.1"
                     /translation="MKTIDKSLSRRNFIRLGGLTGAALTIGYAMPAWAKGKPEIFTGE
                     EATNLGIELTSFVSIDKTGKVTILCHRAEMGQGAFQAVPQIVAEELEVSLDDVNIEFA
                     PSSQTKYGSQSTGGSSTVRGAYKALLQTGATAREMLIAAAAAKWNVSKDECYAENGFV
                     IDRKSGKKLSYGELVEDASKVTPPKDVKLKSRSDYKVVGKPLPRQDNPGKINGTAQFG
                     LDKKLPGMLYAVVERNPRFHGKVKSFDDSAAKQTAGVKKVFKVSMPVFDFEREGVAVV
                     ADSLWSAMQARKALKVEWDDSGFEHLSTDALYARMRDDLNKPALTQRTGGNPDAIFQK
                     SEKKIEAIYETPYESHSCIEPLTCTASVKGDKCEIWGPIQAPDWIQADVSQRLKIPVD
                     NVTVHMTFLGGGFGRKAFTDYTYEAVVISKEMQAPVQVMWTREDDMTQGPFRPGAVYG
                     CKGSVSEGGRVTSYQVKMAAQNMDQQSPHPDKTIFNGSDVEGFAKDYFENIPHYSFGD
                     VPTDSPIPVMWWRSVYSSTNGFAFESFMDELATAAGKDPMEFRKDHLGDRYRAVLEKL
                     EEVSDWKSRKKNDGWGVAITECFNSIVGEAVKVSKNADGKLKLDKVYAVMDCGWYVNP
                     DIIRAQVEGSIIMAYGAAAVHETHFKDGMAVETNFHQYKMPRIQDIPEIEVHIMDNDE
                     KPGGVGEPGLPPFAPALCNAIFDLTGKRIRKLPFNVSEV"
     gene            complement(6143..6559)
                     /locus_tag="VEV83_10615"
     CDS             complement(6143..6559)
                     /locus_tag="VEV83_10615"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK45611.1"
                     /translation="MRTKIVFALVVMAASFLGFTFQDPDLDESIKRGKEVYTLNCQNC
                     HMENGEGMEAVYPPVAKTDYVQDAQKNIDIVLNGQHGAITVNGKQYDGSMDPMNYLSD
                     KEIADVLNYVRNNWDNKYPMITESQVKEQRDKPANN"
     gene            6735..>7216
                     /locus_tag="VEV83_10620"
     CDS             6735..>7216
                     /locus_tag="VEV83_10620"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK45612.1"
                     /translation="MPITTDLIKELKHEATNTRKILERVPNDKLDWQPHEKSMTIGRL
                     ATHLAEIPIWINRTIDADEFDFAKSTPNYASKESTEAIVQVFDERLADAVKKLEGASD
                     EDLNGLWSLKRGGQTFFTVPKNVNIRNFAFNHAYHHRGQLSVYLRLLDVAVPGMYGPS
                     A"
BASE COUNT         1972 a         1628 c         1642 g         1974 t
ORIGIN      
        1 ttacgatttg cgattgaaga taacaatcgg ctgttaattg caacatgcgc cggaatttaa
       61 actgcattca caactcacaa ttcaccattc acaattcaca accgccaact cactctcgtc
      121 tatcttcgca aatatgcaac tacgtgttga gataagcaac aggcagatcc ttcggatagc
      181 tttgccaatt gccgtttcga tactcgtacc gaacattaac ttcatcacaa ataatgtttt
      241 tctcgggcac ctcaacgagc aagctcttgc catcgcgggg attaccggag tctactacct
      301 cgtatttggc gtgatcggtt ttggattaag cagcggcttg caggcattaa tgagcaggcg
      361 ggccggtgaa gaccgggtgg aagaaatagg tttgcttttt ttgcaggccg tacgaatagc
      421 catcgcattt gctatcggcg gaattctaat cacctggttc cttgcaccgc tggttttgcg
      481 agcgtcgttg cacagtgagc aggatgtgca aatggcgatc agctttctgc gcatccgcat
      541 ctggggtctt ccgttcttat acatatatca aatgcgaaat gcattattga taagcattaa
      601 tcagagccgg tatttgatca ttggtacgct cgcagaaacc attgctaata ttttttttga
      661 ttatgcgctg atcttcggcc attttggttt acctgtgctc ggctttaacg gcgctgctat
      721 cgcgtcgata attgcagaga tcacaggcct cctgaccata ttttcgctta tccacctgaa
      781 aggcatcggc aaacaagtgc agttgttcag gacaaaaaaa ttggaccgcg tcgcgacaag
      841 actgatactg caacaatcag caccaatcgt tttacagttc gcgctgagca ctgcaagctg
      901 ggaattcttt tacatcctca tcgagcatca tggcacacag ccactggcta tttcaaatgt
      961 tatgcggaac ctctttggca tttttggttg ttttgcctgg tcattcgcgt ctgcatccaa
     1021 cagcatggta agtaacatca ttgggcagaa attacaacac cgcgtgaaag aacttgtggt
     1081 taagatcatg aagatcgcgt tgcttttttc cgcaagcgtt gcattgctga taaatgcctt
     1141 caccagattt tttctaagcg catatggaca aagcgaaagc ttcatcattg cagcgatccc
     1201 cgtcgcgaga atcatctcga tagcgctcat ccttcagtct gtttcggtgg tgtggctaaa
     1261 tgctgttgtg ggcaccggca acagtaagcg aaatcttatt acggaactga tcgcaattac
     1321 agtgtattgt ttttatgtgt atttcatact tgaatatttt catctctcga tcagcctcgg
     1381 ctggatgagc gagtggatat attggatcgc gctttttgtg ccgtcgtatt ggtatattca
     1441 aagcaataaa tggatgggga cgaaaatata gattttgttt atttgcaatt ggactaaggc
     1501 atgttacaat attcacttag ttccgttggc tgaggcggca atagagacaa ctaaactctg
     1561 atctgtaaca tgaacaaatc caccgattaa gataaaagac tgttcaatgc ctcatagtcg
     1621 tcttttgtat caatgtccac actgcctttt ctaaacaaaa cagttgcaac atcatcgccg
     1681 tgtttttcaa tgatctttct cgctcctgca tctccctcca gcatgagcaa ttctgaaaac
     1741 aagtcttttt gaaaaagcga aggcggtcct aaagcttcgc cataatcgca agctataatt
     1801 cgtttgccgg tttcttcctg tttactgatc aactcattca ataaagaagc cgacacataa
     1861 ggctgatcac agggcatgag aattgctgca tccactgcag cagaaatttc taaaagagca
     1921 ttaatgccag tgcgaaccga agaagccatt ccctcttccc atccggtatt aataactatg
     1981 tgtgcttcgt tttcatccaa ttcgttcacg atgatgtcag cgtttgctcc cagcacgaca
     2041 attacctgtt ccgcatttga tctcacagct tcggtcactg catgctttaa caagctgctg
     2101 cctttgtgca tcaataattg cttcggctca cccaatcttt ccgatgcccc agcggccatt
     2161 ataacgaccg cgcaattttt tactatcgct ttatcggaac tgatctaaac tgttttaagt
     2221 tttagaaatt tttacttctt caatcacagt agaagctcga gggtgtatca tttccttgtt
     2281 tcgcagaggc tgaagatttc tcccggaaaa tgctgctttt atttctgcca atattgagac
     2341 agcaatttct tcggccgtct cggcgccaat gtccaggcca accgggctgt gtacaacaga
     2401 gagttgttct tccgttacga ccacaccttc ttcttttaac tcgccaagca tccgctgcag
     2461 ttttttcttc ggcccgagca tgccgatata tcgcagatct tttttaacaa gctgcgaaag
     2521 cagaacctta tcgtaattgt aattatgcgt catcaaaaca aaaaccgtct gctggtctat
     2581 atttattttc tcgagggcgc tctcagggtt agaaaccaaa acctggcacg acgttgaaaa
     2641 tcgctcgttg tttgcaagat ccggacgccc gtcggtgact gtcacttccc acccgagaat
     2701 ttcggccatg cgtacaagcg gtatcacatc atttccggca ccaataatta ccaatgcaac
     2761 gggtgggctg atggcttcaa tgaatgcagt taccgcgtaa tccttagaca cataattttt
     2821 gaacgatgaa acttcattta ataaagcgtc gtttgcgtct gcgatcaaaa tctcttgcag
     2881 gattggtgga gaaccgacga tcgccttgtc ttcttgcaac aacaagcagg ttccatattg
     2941 tggatctttt ttactctcca aagaaaacaa agtaacgaga actgtttttt gtcttttttc
     3001 atctatcgct ttcaaaaacg cgatcggatt attcggatca tcgctgctga tcggttcgat
     3061 cagaacttgt atgatcccat tacatcccag gccaacacca aactttgcat cgtcgtcatc
     3121 catagtgtcg tacgtaacaa gctttgattt tttttccatc atcacaagca acgcttttct
     3181 caatgcatct ccttccaaac aacctccgct gatcatgccc gtcagttgtc cgtcttccgt
     3241 gatgagcatc cgtgcaccgg gcctgcgata cgaagagcct tccacgtgca ccaccgtagc
     3301 cagcgcggtt tgttttccga gccgctgcgc ttcctcaaat gcttttatga tgtcccggat
     3361 ctctttcatc gccgaaattt accaattata ctgcaaaagc aaattccaac attagtcacc
     3421 ttaaaattgt tgggaattat gtaccttgat cgccattctt ttaaactatt tgtatggaat
     3481 cgtatagcct ctccattaac ggaaaaactt ataacgttca ggcagatccc cagatgccct
     3541 tgttatgggc aattcgcgaa ctcgccggct tgccgggcac aaagtatggg tgcgggatgg
     3601 cacagtgcgg cgcatgcacc gttcatctga atggtaccgc agtgcgatca tgccaggtga
     3661 aagtttctgc cgctgctcag caaagcatca ccaccatcga aggactttca aacgataatt
     3721 ctcaccccgt gcaaaaggca tggctggcgg aacaggtacc gcaatgtggt tattgccaga
     3781 gtggacaaat aatgtcggcg gttgcgttgt tgaagaaaaa tcctaatcca acagataagg
     3841 atattgacag tgcgatggcg gggaatattt gtcgttgcgg cacatatccg cgtataagaa
     3901 aggctatcaa agctgcggcg cagatgatgg caaacgctcc aacaaattaa aaatgcaggc
     3961 agatgaaaac gattgataaa agtttatcac gcagaaattt tattcggctc ggcggtctca
     4021 ccggcgcagc gctcactatt ggatacgcga tgcctgcatg ggcaaaggga aagccggaga
     4081 tctttaccgg cgaggaagca acgaaccttg gcatcgaact cacctcattc gtatcgattg
     4141 ataaaaccgg caaggttact attctttgcc atcgtgctga aatgggacaa ggtgcgttcc
     4201 aggcggtgcc acaaattgtt gcggaagagc ttgaagtatc gcttgacgat gtaaatattg
     4261 aatttgctcc gagtagtcaa acgaaatatg gtagtcagtc aacaggcgga agttctacag
     4321 tccgcggagc ttacaaggct ttgcttcaga cgggcgctac ggcgcgtgaa atgttgattg
     4381 ctgctgctgc cgcgaaatgg aatgtaagca aagatgaatg ttacgctgaa aatggttttg
     4441 tgatcgatcg taaaagcggg aaaaagctaa gctatggcga gttggtggaa gatgcgtcaa
     4501 aggttacacc accaaaagat gtaaagttaa aaagcaggtc agattataag gtcgttggaa
     4561 agccgttgcc aagacaagac aacccgggaa aaattaacgg cacagcacaa tttggtcttg
     4621 acaaaaaatt gcccggtatg ctgtatgcgg ttgttgaacg caacccacgc tttcatggca
     4681 aggtgaaaag ctttgatgat tccgcagcaa aacaaactgc cggtgtaaaa aaagttttca
     4741 aagtgtcgat gcctgtattt gattttgaac gggaaggcgt agcggtcgtt gctgactctc
     4801 tttggagtgc gatgcaggca cgaaaagcac taaaggtgga atgggatgat tcaggatttg
     4861 aacatttaag taccgacgcg ttgtatgcac gcatgcgcga tgatctgaac aaacctgcgc
     4921 tgacacaaag gacaggcggc aatcctgatg cgatctttca aaaatcagaa aagaaaattg
     4981 aagccattta tgaaacacca tatgaatcgc atagttgtat agagccattg acctgcaccg
     5041 cgtcggtaaa aggtgataaa tgcgaaatat ggggaccgat acaggctcct gattggatac
     5101 aggccgatgt gagccagcgc ttgaaaattc cggtggataa tgttacagtg catatgactt
     5161 ttcttggcgg tggttttgga cgaaaagctt ttacagatta cacgtacgaa gccgttgtga
     5221 tttcgaaaga aatgcaggcg cctgtgcagg taatgtggac acgtgaagat gatatgacgc
     5281 aaggcccttt tcggcccggt gctgtatacg gatgtaaagg tagcgtgagt gaaggcggac
     5341 gcgtaacttc ttaccaggtg aagatggctg cacagaatat ggaccagcaa tcgccacacc
     5401 cggataaaac aatttttaac ggcagcgacg tagaaggttt cgctaaggac tatttcgaaa
     5461 acattcctca ttatagtttt ggcgatgtgc ctaccgactc accgataccg gtgatgtggt
     5521 ggcgttctgt ttattcgtct acaaatggct ttgcattcga aagctttatg gatgaactcg
     5581 cgactgcggc cggaaaggat ccgatggagt ttagaaaaga tcatcttggc gatcgatatc
     5641 gcgcagtact ggaaaaactg gaagaagtct ctgactggaa atcgagaaag aaaaatgacg
     5701 gctggggcgt tgccataaca gaatgtttca acagtatcgt tggcgaagcg gtcaaagttt
     5761 cgaagaatgc ggatggaaaa ttgaaactcg ataaagttta tgctgtgatg gattgcggtt
     5821 ggtacgtaaa tcccgacatc atccgcgcac aggttgaagg cagcattatt atggcatacg
     5881 gcgcagcagc agtccacgaa acgcatttca aagacggcat ggccgtggag accaatttcc
     5941 atcagtacaa gatgccgcgt atccaggaca ttccggaaat agaagtgcat ataatggaca
     6001 atgacgaaaa gcccggagga gttggagaac cgggattacc accgttcgcg ccggcattgt
     6061 gtaatgccat ttttgatctt acaggcaaaa ggataaggaa gctgcctttt aatgtcagcg
     6121 aagtctgatt aagcaaacaa aatcaattat ttgcaggttt gtctctttgc tcttttacct
     6181 gcgattctgt gatcatcggg tacttgttgt cccagttatt cctgacataa ttcagcacgt
     6241 ccgcaatttc tttatcgctc aggtaattca tcgggtccat tgagccatcg tattgcttgc
     6301 cattcaccgt tatcgcccca tgttggccgt tgagaacaat atcaatattc ttttgagcgt
     6361 cctgcacata gtccgttttt gccacaggcg gatacacggc ttccattcct tccccatttt
     6421 ccatatggca attttgacaa ttgagcgtgt acacttcttt tcctctttta atgctttcgt
     6481 caagatccgg gtcttgaaat gtgaagccca aaaaactcgc agccataaca accaaagcaa
     6541 atacaatctt tgttctcatt taccaggttt tgaaacaaaa atacaaataa gcacaacaga
     6601 aataaccagg gtgtgtgacg tgcttcagga agtctggccc atgtcatcga gcacgtgctg
     6661 attaatactt gttaaaaacc atcaatctta attttcattc tgagaaatga tttctatttt
     6721 ggcaaaaaat ttttatgccg atcaccacag acttgattaa agaacttaaa cacgaagcta
     6781 ctaatacgcg aaaaatactg gaacgcgtgc ctaatgataa acttgactgg cagccgcatg
     6841 aaaaatcgat gacgatcgga agacttgcca cacacctggc cgagattcca atttggataa
     6901 accgcacgat cgacgctgat gaatttgatt ttgcaaaatc aaccccgaac tatgccagca
     6961 aagaaagcac tgaagcgatc gtgcaggtgt ttgatgaaag gctggctgac gctgttaaaa
     7021 aattagaagg agcatccgac gaagatttaa atggcctgtg gagtctgaag cgcggagggc
     7081 aaaccttttt tacggtgccg aaaaatgtga acatcaggaa ttttgctttc aatcatgcgt
     7141 atcaccatcg cgggcaattg tctgtttatc ttcgtttgct tgatgtggct gttccgggca
     7201 tgtatggacc ttcggc
//
LOCUS       DASQJI010000378        11243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1116436,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000378 DASQJI010000000
VERSION     DASQJI010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11243
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116436"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VEV83_10625"
     CDS             complement(<1..362)
                     /locus_tag="VEV83_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45613.1"
                     /translation="MPANENNSSRRDFIKNAALTTAGFYIVPRHVLGRGHIAPSDKLN
                     IAGVGCGGKAEVNLPSAWNNGAENIAVLCDVDDRMAVKARAKWPNAPYYKDYRVMLEK
                     EAKNIDAVIVTTPDHMHAP"
     gene            complement(947..1963)
                     /locus_tag="VEV83_10630"
     CDS             complement(947..1963)
                     /locus_tag="VEV83_10630"
                     /inference="COORDINATES: protein motif:HMM:NF020251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK45614.1"
                     /translation="METNKLQQRLFENIKAKLPSHLSLVDEVAELLDVSNDNAYRKIS
                     GETAVSLEEIAKVAAYFKISVDQALNLQTDGGTYTGKYVTAENFNFEKYLEQQLNDLR
                     FVASFKQKELTYVSKDIPFVYYYAFPELAGFKFYFWTKVLLQFPQFAHTPFSFDLFMR
                     SLLDVGSQVIGAYNTIPGTEIMSIENINTTLRQIAYCQETYLFRSKEELKSIFKKLHD
                     MTDHMEKMARLGKKFLPGREPDDQSAEYRLYVNDFLIGDNSILVTTNGNRISFLVHGH
                     VNYIMITNPTFTSHHFNFAQSILKQSILISEVGEKYRARFFHIIHHRIEQCRLGKMEA
                     VGKL"
     gene            complement(2091..4454)
                     /locus_tag="VEV83_10635"
     CDS             complement(2091..4454)
                     /locus_tag="VEV83_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45615.1"
                     /translation="MGNLNHTDSVPVLRSRLSFQPLMRAWQEEVQKKTATEKMYLPLL
                     QELLQHQELLAPIDDFRILHEHKNLIEQIAAAIFPVSLRGREKLYAIADPSCYKTVFA
                     SDPTKQIVPSKRETYFQGKDDEIKKNIVIAKLKMAYKLILDKFYNVKLAGDVASIYAV
                     PDLEKGLNSYLGIELDPYFVDVSCCGDLPVVDADFFRACFTVDDVLRQPALYEKLPLN
                     EFIFDGIVIVYINDVTETQAIRSIKQMFKDPDFFSFRENMVRLQQETRFLLDEPGVFV
                     GITPLSDGLYSNNGKPGNSNSLFAEQMQTADAKAEVCGQLTAAFKASETSYLFFDRTN
                     IHVSDHEFVKNVGNRWSSGFLFPLHGHQHVIGSLEVFSENCAPITARVLPKLEPLIEL
                     AETALLKNVEHLENEVNKIIKEQFTPVHPAVEWKFADAATRYFFRQKNEPEPKMEPIK
                     FEDVHPLYGAIDIKNSSGQRNLSVQLDLSDQLGWVKQILNSALPAGLSSLLKETRSKI
                     DTWSDHINIGLSTDDEQDLLNFLKGDIANLLHHLEEMMPAIGPEIRKYFDVLDPDLHI
                     LNNHRKKFDDSINRINATLARFFEREQREAQKIYPHYFERFITDGIEFNIYVGHAIAP
                     QKKFNDIYLKNIKLWQMKTMTIAAQRISRIQQELAVPLQTTQLILVYSKPISISFRSL
                     ERRFDVDGGYNVRYEVIKKRIDKVRLKNAGERLTKPGTIAIVYTQSSEAEEYIEYIGF
                     LKTQNLLRGPIEQFELEELQGVGALKGLRVGIVFDEPTDRSQQPIHN"
     gene            4860..5561
                     /locus_tag="VEV83_10640"
     CDS             4860..5561
                     /locus_tag="VEV83_10640"
                     /inference="COORDINATES: protein motif:HMM:NF023425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050825 - ice binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ice-binding family protein"
                     /protein_id="HYK45616.1"
                     /translation="MDTNISSNVSSAESSTAAQAVVNLGVAGKFVILSKSGITDVFPS
                     AITGDIGTSPISGAAIHVTCAEETGTIYSVDAAGPLPCRVIKPGRLTTAVKDMQTAYT
                     DAAGRSNPNFLNLGAGNIGGKTLKPGLYKWTTAVTIPTDVTISGGPNAVWIFQIAGTL
                     SMSSAVKITLTGGAQAKNIFWQVAGGATFGTTSHFEGIVLGKTGINLKTGASINGRML
                     AQTAVTLEKNTVKAP"
     gene            5817..8222
                     /locus_tag="VEV83_10645"
     CDS             5817..8222
                     /locus_tag="VEV83_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional YncE family protein/alkaline
                     phosphatase family protein"
                     /protein_id="HYK45617.1"
                     /translation="MKKLFCLVISASLVSCSFTQNKIAARVQLPNGWSLSPAGKSLQL
                     GDLPLNIAVSPSKKYLAVTNNGESTQTLQLIDAVNDKVLDKIDIPKSWYGLKFSADER
                     FLYASGGNDNRILKYAVSKNKLSLKDKIKLGNEWPVAISPTGFDIDESTQKMYVVTKE
                     DNSLYVIDLKTKTIIQRDTLRAEAFTCLLSPDKKELYISLWGNENIVVYNTSQKKLTD
                     AIRVGDHPNELCITKNGQILFVANANDNTVSVVNIKKRQVIETLDAALFPHSPTGSTT
                     NGLALSEDEKTLYIANADNNCLAVFDVSVPGNSHSKGFIPVGWYPTCVRVAGNKIFVA
                     NGKGSSSLPNPDYDPFNTSSKGNYQQGDGKNDYIGGLLTGTLSIINTPSTEELGKFSR
                     AVYQNTPYQKDKEPVATREENNPVPAKPGDPSPIKYVFYIIKENRTYDQVLGDMKEGN
                     GDKSLVLFGENVTPNLHALAREFVLMDNFYVDGEVSEDGHSWSMGAYATDYIEKSWPT
                     NYGGRGGSYDGEGRRLIGNNKQYLWDNCKNAGVSYRTYGEFVDDFKPNIAVLKGHVCP
                     SFTGWDLSVRDTVRYGEWAREFDSLVAGNALPRFMSLHIGGDHTEGLRIGRPTPAAHV
                     ADNDLAVGLFVQHLSESRVWKESVVFILEDDAQNGPDHVDAHRSTVYVAGGYVKRHFV
                     DHTTYSTSSVLRTIELILGLQPMSQYDAAATPMFRCFANNLDTTAFHARPLQVDINAK
                     NKNENTWQRKSEMFDFSKEDRAPDNQFSEVIWKGVKGIDSQMPAPKHAAFIKVNDEER
                     DGD"
     gene            8584..9774
                     /gene="kbl"
                     /locus_tag="VEV83_10650"
     CDS             8584..9774
                     /gene="kbl"
                     /locus_tag="VEV83_10650"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HYK45618.1"
                     /translation="MNEKFVERIFSELEDIQSSGLFKKERIITSPQGAEITVNDLTVL
                     NFCANNYLGLSSHPKVIEAAHKAIETHGYGMSSVRFICGTQDIHKELEEKIAKFLGTE
                     DTILYCAAFDANGGLFEPLFNEQDAIISDALNHASVIDGVRLCKAQRYRYEHNNMEDL
                     ENKLVDSAHLRSRIIVTDGSFSMDGTIAQLDKICELAERYDAIVMIDDSHSTGFLGKT
                     GRGTHEYRNVMGKIDIITGTLGKALGGANGGFTSGRKEMIEMLRQRSRPYLFSNTLAP
                     SIVGASIAVFDMLSETTELRDKLESNTHYFRTKMTEAGFDIKPGEHPIVPIMLYDAVV
                     AQNFAAKLLDEGIYVIGFFYPVVPKGQARIRVQLSAAHELQHIDKAIAGFTKIGRELG
                     VLKN"
     gene            9792..10661
                     /locus_tag="VEV83_10655"
     CDS             9792..10661
                     /locus_tag="VEV83_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HYK45619.1"
                     /translation="MTLIKIVSKAFSFFVSYFLLLISYFLLSIFNSSCSSNNVTTDDS
                     LKKYFDQYHVTGTFGLFNNGQGQFTIYNLKRFTDSAYLPASTFKIVNSLIGLQTGVIN
                     NEKMVIPWDGVKRSNEAWNKDLTMEEAFRVSAVPYYQEVARRIGKDTMQRWLDTLGYA
                     AKYGRAVIHNDIDSFWLNNDIKITADEQLGLVKRLYFEQLPFQERAQQIVKKVMLQED
                     NANYRLSYKTGWGFRENGNSIGWIVGWEEENKHPYFFVLQIEGPHDMDMQTVRVAILK
                     NILTQYGFLQGKK"
BASE COUNT         3208 a         2425 c         2556 g         3054 t
ORIGIN      
        1 ggtgcatgca tgtggtcggg cgttgttacg atcaccgcat cgatgttctt ggcttccttt
       61 tcgagcataa cacgataatc tttgtagtaa ggagcgttcg gccatttggc tcttgctttc
      121 acagccatgc gatcatcaac atcgcaaagc acagcaatat tttctgcgcc gttattccat
      181 gcagatggca gattcacttc cgcttttccg ccgcacccca cgcctgctat gtttaactta
      241 tcactcggtg caatgtggcc gcggcccaac acgtgacgcg gtacgatata aaagcctgct
      301 gtagtgagcg cagcgttctt aataaaatca cgacggctgc tgttgttttc atttgctggc
      361 ataacattgt aattgaggtt gaatgtacga caagaataaa acaggctaat tcattttata
      421 ggcctgttgc aaaattttga gaagtttatt atgaggtccg gttttcacgg gaatgacatt
      481 ggtcgtagag tgttttgtac ttcgtggaaa gcacatttct cacttgacag attcccgcag
      541 cccggaatga catccaaaca agagcggtgt ccatcgtagc acaaactctc ttgccggctt
      601 catgcaccaa tccaccttcg tgagatgagc cgacagatcg cctaattatt tcgacaatcg
      661 cgagggaatg cgttctcgaa agacacattc acgactttgg gctttaaagt agtgatgtat
      721 tgcagcaaca actggatgct catttcaaat gtttcccaac cccagtcaaa gagtttttct
      781 cgtaagaatg gtttctgatt ccggaattga aaatcaaaag ttgattgtgc gcaggaagtg
      841 ccttaaattt tcgcacagag ctagcacagt gcatagagac aaattctttt cttagctctg
      901 cctcctctgt gcgaactaga acttcaaacc tcaaaccttc tttagcctac aacttcccaa
      961 ccgcctccat cttcccgagg cggcattgct cgatacgatg atgtatgata tgaaaaaagc
     1021 gcgcccggta tttttccccg acctcgctga tgagaatgga ctgctttaaa atgctttggg
     1081 caaaattgaa gtggtgggat gtaaatgtgg ggtttgtgat catgatataa ttgacatggc
     1141 cgtgcacgag aaacgaaatc ctattgccat ttgtggtaac caggatcgaa ttatcgccaa
     1201 tcaaaaaatc atttacatac aacctatatt ccgcagattg gtcgtcaggt tcacgccccg
     1261 gcaggaattt ttttcccaac ctcgccatct tttccatgtg atccgtcatg tcatgtagtt
     1321 ttttaaagat tgacttgagc tcttcttttg agcgaaaaag gtacgtttcc tggcagtatg
     1381 caatttggcg caatgttgta tttatgtttt caatgctcat gatctctgtt cccggaatag
     1441 tattgtaagc gcctattacc tgcgacccta catccagcag tgaacgcata aataaatcaa
     1501 agctaaaagg ggtgtgtgca aactgcggga attgcaataa gacctttgtc cagaaataaa
     1561 acttgaaccc tgctaattcg ggaaaagcat aataataaac gaatggaata tccttgctga
     1621 cataagtgag ttctttttgt ttgaaagatg caacaaacct gaggtcattc aactgctgtt
     1681 ccaggtattt ttcaaaatta aagttctccg ctgtcacata ttttcctgta tatgtcccgc
     1741 catccgtctg caggtttaaa gcctggtcaa cagaaatctt aaagtacgct gcgacctttg
     1801 ctatttcttc cagggaaacg gctgtttctc cgcttatttt acggtaagcg ttatcattac
     1861 ttacatcgag taattccgca acttcgtcca cgagcgaaag atgggatggc agcttcgcct
     1921 tgatgttttc aaacagacgc tgctgtagct tgttagtttc catgtgtatg ggacttaatc
     1981 ttcagtttcc caagtaacgt tagaatactt gtccgcataa atatattaaa agtaaaatga
     2041 aacgtgcggc attaatggcc ggtttagaaa atccactgta ggcgctcagc tcaattgtgg
     2101 atcggctgct gcgaacgatc tgttggttca tcgaatacga taccaacgcg taaccctttt
     2161 aacgcgccga ctccctgcaa ctcttcgagt tcaaattgtt ctatgggtcc tcgcagcaaa
     2221 ttctgtgttt tcaagaaacc aatgtattca atgtattctt ccgcttcact gctttgtgtg
     2281 tacacaattg caatcgtacc gggcttcgtc aatcgttcgc ctgcattttt cagacgcact
     2341 ttatcaattc tttttttgat cacttcgtac cgcacgttat agccaccatc aacatcaaat
     2401 ctacgctcaa gactccggaa gctgatagaa atcggtttac tgtataccaa tatcaattgt
     2461 gttgtctgta atggcacagc gagttcctgt tgtattctgc ttatccgttg cgctgcgata
     2521 gtcatggtct tcatctgcca gagcttaata ttcttcaggt atatgtcatt aaactttttt
     2581 tgaggcgcta tggcatgtcc aacgtagatg ttgaactcga tgccatcggt gataaaacgc
     2641 tcgaaatagt gcgggtaaat tttttgcgcc tcccgctgct cacgttcgaa aaatcgtgca
     2701 agcgtcgcat ttatgcggtt aatgctatcg tcaaatttct tacgatgatt gttgagtata
     2761 tgcaggtctg gatccagtac atcaaaatat ttccgtattt ccggcccgat cgcaggcatc
     2821 atctcctcca ggtgatgcaa aaggtttgcg atgtcacctt ttaaaaaatt aagcagatcc
     2881 tgctcatcat cggtcgaaag tccaatgttg atgtgatcac tccatgtgtc aatttttgac
     2941 ctggtctctt tcagcaacga tgaaagacct gcaggcaacg cagagttcaa tatttgtttc
     3001 acccatccaa gctggtctga cagatcgagt tgaacagaaa ggtttcgttg tcctgacgag
     3061 tttttgatgt cgatggcgcc gtacaacggg tgaacgtctt caaatttaat gggctccatc
     3121 ttcggctccg gttcgttttt ctgccgaaaa aaataacgcg ttgcagcatc cgcaaacttc
     3181 cattcgacag ccggatgcac aggtgtaaac tgctctttaa ttatcttatt gacttcgttc
     3241 tccaaatgct cgacattttt aagcaatgct gtttctgcga gttctatcag aggttcgagt
     3301 ttgggcagaa cacgggcggt aataggtgcg caattttctg aaaatacttc caggcttccg
     3361 atcacatgct ggtgcccatg caggggaaac aagaagccgc tgctccatcg gttacctaca
     3421 tttttcacaa actcatgatc gcttacatga atgtttgttc ggtcgaaaaa aaggtatgac
     3481 gtttcactgg ctttaaatgc cgcagttagt tggccgcata cttcggcttt agcgtcggcc
     3541 gtttgcattt gctccgcaaa aaggctgttt gaattacccg gttttccatt atttgaatag
     3601 aggccgtctg acaacggagt gataccaaca aaaacgcccg gttcatccag gaggaacctg
     3661 gtctcttgtt gcaatctgac catgttttca cgaaacgaaa aaaaatcagg gtccttgaac
     3721 atttgtttta ttgaccggat agcttgcgtt tcagttacat cattgatata aactatcacg
     3781 atcccatcaa aaataaattc gttcagtggc aacttttcat aaagtgcagg ctgtcttaaa
     3841 acgtcgtcga ccgtaaaaca tgcccgaaaa aagtcagcgt ctacaacggg caggtcaccg
     3901 caacacgaca cgtcaacaaa atatggatcg agttctatcc ccagataact gttgaggcct
     3961 ttctccaggt ccggaactgc gtagatcgat gcaacatcac ccgccagttt tacgttgtaa
     4021 aacttatcga gaatgagttt atacgccatc ttgagtttgg caataacgat attcttcttg
     4081 atctcgtcat cctttccctg gaagtaagtt tctcttttgg aaggaacgat ctgtttggta
     4141 ggatcggaag caaaaacggt tttgtagcaa gaagggtcag ctattgcgta tagtttttcc
     4201 ctgcctcgta gagacaccgg aaaaatggct gcggcgattt gttcgataag gttcttgtgc
     4261 tcatgcaaga tgcgaaaatc gtcgatcggc gcgagcagtt cctggtgctg caagagctct
     4321 tgcaggagag gcaaatacat tttttctgtg gcagttttct tttgtacttc ttcctgccat
     4381 gccctcatca ggggttgaaa agataagcgg cttctcagca ccggcacaga gtcagtatgg
     4441 tttaaattac ccatcgtaaa atttttctcg ggccagggat tgaaggtggg tcagtaatgc
     4501 ttactaaaga taaacactaa ccaccgataa aaaaaagaca ctgcgaccac aggcaacttt
     4561 atacagccgg cataaatcgg cgatttattt accagttagc caaatattaa tcattcaagg
     4621 gaagacgtgc aagtcgggag catcaaagac acgagtaatg tgtgaatgat gtaacatgaa
     4681 ttcagaattg tgtaacgcta agttcaatta actacatcat cttacagagt cagggccgaa
     4741 gtaactaaag cccaaattat ttcacaatta aatcatatcg gatcatgcgt ttaaaacaat
     4801 cgttattatc aaccctggca acgctattgg ttgtattact ggggggatgt aaaaaaaata
     4861 tggataccaa tatatcttcc aacgtgtctt cagcagaatc gtcaactgcc gctcaggcag
     4921 tggtaaatct tggggttgca ggcaaattcg tgattctgtc aaaatcagga atcaccgatg
     4981 tctttccctc cgctattacc ggggatattg gtacgagccc aatctcaggt gcagctattc
     5041 atgtaacgtg tgcagaagag acggggacaa tatactcagt cgatgctgcc ggtcctcttc
     5101 catgcagggt aattaagccg ggcaggttaa ccaccgcagt aaaggatatg caaaccgcgt
     5161 acaccgacgc agccgggcgt tctaacccga atttcctgaa tttgggcgcc ggaaatattg
     5221 gcggaaaaac gcttaagcct ggcctgtata aatggacgac tgcggttact atcccaactg
     5281 atgttacaat ttcgggaggg ccgaacgctg tctggatatt ccaaattgcc ggcaccctta
     5341 gtatgagttc tgcggtgaaa attaccctca cgggaggtgc acaagcaaag aatattttct
     5401 ggcaggtagc cggcggtgcg accttcggaa cgaccagtca ttttgaaggg atcgtattgg
     5461 ggaagacagg tattaatttg aagacagggg catcaataaa cggaaggatg ttggcacaaa
     5521 cagcggtcac tcttgaaaag aatacggtta aagcgccata ataaattcaa agaatcaaaa
     5581 tctcgcaaga ggctgccgaa aggccagcct ctttttcttt ttcccgattg ttccaaatct
     5641 tccagagcgt gctccggtta gcggacgcat tgaaacgcag aaataatggc cttctgtgaa
     5701 aggaattcaa agctatataa ttgctccgca tattttctct cgagcaagaa tactaattcg
     5761 ttgttattat aaccacaaat aaatatccgc ctaattttac tgcggaaagc ttctttatga
     5821 aaaaactctt ttgtttggta atctctgctt cattagttag ctgttcattc acgcaaaaca
     5881 aaatcgccgc gcgcgtgcaa ctgccaaatg gttggagcct tagccctgcc ggaaaaagtt
     5941 tgcagcttgg tgatttgcca ttgaacatcg ccgtatcccc ttccaaaaag tacctcgcgg
     6001 taacaaacaa cggcgaaagc acgcaaacgc tgcaattgat agatgcagtg aatgataaag
     6061 tgctcgacaa gatcgacatc cccaaaagtt ggtatggcct gaagtttagt gccgatgaaa
     6121 ggtttttgta tgcgagtgga ggaaacgata atcgtatttt gaaatatgct gtgtccaaaa
     6181 acaaactcag tttgaaagat aagatcaaac tgggaaatga atggccggtt gcaatttctc
     6241 ccaccggctt cgacatagat gaatccacgc aaaagatgta tgtagttaca aaagaagaca
     6301 acagcctgta cgtaatagat ttgaaaacaa aaacgatcat tcaacgcgac accctgaggg
     6361 ccgaagcatt tacgtgcctg ttgtcgccgg ataaaaaaga attatacatt tccctatggg
     6421 gtaatgaaaa catcgtggta tacaacacct cgcaaaaaaa attaactgat gctattcgcg
     6481 ttggtgatca tccaaacgaa ttatgtataa cgaaaaatgg ccaaattctt tttgttgcga
     6541 acgcgaatga caacaccgtt tcggttgtca atatcaaaaa aagacaggtg attgaaacat
     6601 tagacgcggc actgtttccg cattcaccaa ccggttcgac gacaaatgga cttgcgttaa
     6661 gtgaagacga aaaaacgctt tatatcgcaa atgccgacaa taactgcctg gccgtttttg
     6721 atgtgagcgt gccagggaac agccactcca aaggctttat tcccgttgga tggtatccga
     6781 cctgcgtgcg agtggccggc aataagatct ttgtcgctaa cggaaaaggc agttcgtcgc
     6841 ttccaaatcc tgattatgac ccgttcaata catcatcaaa aggaaactat cagcaggggg
     6901 acggaaaaaa cgactatata ggcggattgc tgacaggaac attaagtatc attaacacac
     6961 cttccacgga agagctcggc aaattttcgc gggctgttta tcagaacaca ccttatcaaa
     7021 aagacaagga accagtcgcg acccgggaag agaacaatcc cgttcctgcg aaaccgggcg
     7081 atccgtcgcc tattaaatat gtgttctata tcataaaaga aaacaggaca tacgaccagg
     7141 tgctcggcga tatgaaagaa ggaaatggcg acaagagcct cgtgcttttt ggagaaaacg
     7201 taacgcccaa cctgcatgcg cttgcgcggg aatttgttct gatggataat ttttatgttg
     7261 acggagaagt gagtgaagac gggcacagtt ggagcatggg cgcttatgca accgattata
     7321 ttgagaagag ctggcccaca aattacggcg gtcgcggagg aagctacgat ggcgaaggcc
     7381 gacgccttat tggaaacaat aaacaatacc tctgggataa ctgcaaaaat gcaggagtta
     7441 gttaccgtac ttacggagaa ttcgtagatg atttcaaacc gaacattgcg gtattaaagg
     7501 gccacgtttg cccatctttc acgggctggg acttaagtgt gagagatacg gtgcgctatg
     7561 gcgaatgggc gagagaattc gattcattag tagctgggaa tgccctccca cgtttcatgt
     7621 cgcttcacat cgggggtgac catacagaag gtttacgaat aggaagacca acaccggctg
     7681 cccatgttgc cgacaatgat cttgctgttg gactgtttgt gcaacacttg agtgaaagcc
     7741 gcgtgtggaa agaaagcgtc gtgttcattc tagaagatga cgcgcagaat ggacccgatc
     7801 atgtagatgc ccatcgaagt acggtttatg ttgccggcgg atatgtaaag cggcattttg
     7861 tggatcatac aacgtactcc acaagttctg tgttgcggac gattgaactg atcctggggc
     7921 ttcagccgat gagtcaatat gatgcggcag cgacgcccat gtttcgttgc tttgccaaca
     7981 atttagatac aaccgcattt catgcaaggc cattacaggt tgatatcaac gcaaaaaata
     8041 agaatgaaaa cacctggcag cgaaaaagcg aaatgtttga cttcagtaaa gaagatcgcg
     8101 cgccagacaa tcaatttagt gaggtgatct ggaaaggggt gaaaggtatc gactcacaaa
     8161 tgccggctcc gaagcacgca gcgtttataa aagtaaatga tgaagaaaga gacggcgact
     8221 gatctcagta cgactggtgt acagggtagt aagatataaa ccttcttaaa ataagttcct
     8281 tttttgcctg ctcgctctga gttttcttct cataagaacc acctcctcca ccggacgacg
     8341 gctgcacgtc attcacttgc gtaggcgcac tcagaataat aacggttgcc gtgatacaag
     8401 ttagcaaaac aaacagtgat atggttttat tgaagcgaat agcagaaggt ttaatagtac
     8461 gaatgtaatc gtaaaaatta tacacgtgaa aattccaatg ttaaaaaaag gtaaacaatc
     8521 gcttctcaga ccggcgggca gtgttttaaa aatcaatagg tttgccgcgc taataaacgt
     8581 gccatgaatg aaaaattcgt cgaaagaata ttttcggagc tggaagatat acaaagctcc
     8641 gggctgttta aaaaggagcg tattataacc agtccccagg gtgctgaaat taccgtcaat
     8701 gacctaactg ttctaaattt ctgtgcgaat aattacctgg gcctgtcctc acatccgaaa
     8761 gtaatagagg ctgctcataa agcaattgaa acgcacggat acgggatgag cagtgtgcga
     8821 tttatatgtg gcacgcagga tatacacaaa gaacttgaag aaaaaattgc gaagttttta
     8881 ggaactgaag ataccatatt gtactgcgca gcttttgacg cgaacggcgg cctgtttgag
     8941 ccgctgttca atgagcagga tgcaatcatt agcgacgcgt tgaatcatgc atctgttatt
     9001 gacggcgtgc gattatgcaa ggcgcaacgc taccgctatg agcacaataa tatggaagac
     9061 cttgagaaca aacttgtcga cagcgcgcat ttacgaagca ggatcattgt gaccgacggg
     9121 tctttcagca tggacggaac cattgcgcaa ctggacaaga tctgtgaact tgcagaacgc
     9181 tacgatgcaa ttgtgatgat cgacgacagc cactcaacag gcttcctcgg aaagactggc
     9241 cgcggcacgc acgaataccg gaatgtgatg ggaaagatcg atatcatcac ggggacgttg
     9301 ggcaaggcat tgggcggcgc gaacggtggc tttaccagcg ggaggaaaga gatgattgaa
     9361 atgcttcggc aacgttccag gccatatctt ttttcaaata cgcttgcgcc gagcattgtg
     9421 ggcgcatcta tcgctgtttt tgacatgtta agtgaaacca ccgaattgcg tgacaaactt
     9481 gaaagcaata cccattattt caggacgaag atgaccgaag caggatttga tatcaagccc
     9541 ggcgaacacc cgatcgtgcc gattatgctg tatgatgcgg tagtagcaca aaacttcgca
     9601 gctaaactgc ttgatgaggg aatttatgtg atcggatttt tctacccggt ggttccaaaa
     9661 gggcaggcac gcatccgcgt tcagttaagc gctgcccatg aattgcagca tattgataaa
     9721 gccatagccg ggtttactaa gatcggcaga gagcttgggg ttttaaaaaa ttaaacgtaa
     9781 atcaatcgtt gatgacatta attaagatag tatcgaaagc tttctcattt tttgtttcat
     9841 atttcttact tcttatttcc tacttcttac tctccatttt caattcgtca tgttcttcaa
     9901 acaatgtcac gaccgatgac agcttaaaaa aatacttcga ccaatatcat gtaacaggaa
     9961 cgttcggttt gttcaacaac gggcagggac aatttaccat atacaatttg aaacgattta
    10021 ccgacagcgc ttatctgcct gcttcaactt ttaagatcgt gaattccctc atcgggttgc
    10081 agactggcgt tatcaataac gagaaaatgg ttattccgtg ggatggagtt aagcgttcca
    10141 atgaagcgtg gaataaagat cttacaatgg aagaggcttt tagagtttct gcggttccgt
    10201 attaccagga agttgccagg cgcatcggaa aagacaccat gcaacgttgg ttagatactt
    10261 taggctatgc cgccaaatat ggcagggcag ttattcacaa tgacattgat agtttctggt
    10321 tgaataatga tattaagatc acggctgatg aacagcttgg tttagtgaaa cggttgtact
    10381 tcgagcagct tccctttcaa gaacgcgcgc aacagatcgt aaagaaggtc atgttgcagg
    10441 aagataatgc gaattacagg ttaagttaca aaaccggttg gggatttcgt gaaaatggta
    10501 attctatagg ttggatagtt gggtgggaag aggaaaacaa acatccatat ttcttcgttt
    10561 tgcaaataga gggcccgcat gatatggata tgcaaacagt gagggttgcc attttaaaaa
    10621 acattctcac tcagtatggt tttctgcagg gaaagaaatg atgagacttt tcattgaaaa
    10681 agattgcaat ggggctaaag ccaattacga ttaatattaa gtgaacagtt ggctgaagcc
    10741 aactgcaata aatagcgcac tgtgattcgc gcatctgttg gttgggcgtt ctctcatctg
    10801 tgcgcatcag tgtaatctgt gagacaacaa aagggctgca ccgaaaaacg ctttttccga
    10861 gaacatattc acttcgatgg tcatgcctaa acgtgatcgt taacaaaaca tgtgatttcg
    10921 aacatatatt cgtttgggca ttttctcatc tgtgcgcatc agtgtaaatc tgtgagacaa
    10981 caaaactgct gcaccgaaaa acgctttttc cgaaaacatg ttcgctttaa tcttcatcct
    11041 ggaagctgat catcaataag tgtataaaca atgctatcgc gcatctgctg tttaggcgtc
    11101 ttcccgcttt ccctcgtctg tgtgcatccg tgtgcatctg tgagacagca aaaggctttt
    11161 tgctaaggcc gcacccattt tccaaaccaa actctaaatt ttcaagatcg attgctcaat
    11221 tggcgcaatg cttgtagctt gca
//
LOCUS       DASQJI010000379         2128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2500326,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000379 DASQJI010000000
VERSION     DASQJI010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500326"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1850)
                     /locus_tag="VEV83_10660"
     CDS             complement(<1..1850)
                     /locus_tag="VEV83_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYK45620.1"
                     /translation="MKKLPAFFLLLACGGAIGQDIDSVWIVNNYTKKEVYIPMRDGKK
                     LFTAVYVPKDTTELHPILMERTPYSCAPYGENKFDPAWWTGYLKEYFKEHYIMVVQDV
                     RGRWMSEDEFVNVRPFNPNKSGKEIDEASDTYDAIDWLVKNISHNNGKVGVHGISYPG
                     FYSTMAAASNHPALKAVSPQAPVTNWFIGDDFHHNGVFFQMDAFDFYSALGFGFGQPH
                     PRPTADSARSIGYPDHDNYKFFLEAGSLKNLTRYMGDTIAFWKDLMSHPNYDAWWKAR
                     DARNATKKLQPAMLWVGGEFDAEDCWGAWNSYKAAEENNPGKSFNKIVEGPWYHSQWA
                     TTDGGHLGNVQFGSNTAAYFQQHLEIPFFNYFLKGKGNTDSIAEANIFITGANKWRSF
                     SAWPPANKEDKTLYLQPDGKLGWSESEGTSDAKYSEYTSDPNKPAPYEEDVHFNRSRT
                     YMDADQRFAERRPDVLTFKTDTLTKDITVTGSVIADLLTSISTTDADFVVKIIDVFPE
                     YMGFNDVDIYAVEDAPNIYPMGGYEMLVRAEIFRGRYRKSYENPEAFMPGEVEEVKFN
                     LPDVAHTFKTGHRIMVQIQSSWFPLADRNPQQFIDIYHCDEKDFIKSDIR"
     gene            complement(1980..2123)
                     /locus_tag="VEV83_10665"
     CDS             complement(1980..2123)
                     /locus_tag="VEV83_10665"
                     /inference="COORDINATES: protein motif:HMM:NF014886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase alpha/beta domain-containing
                     protein"
                     /protein_id="HYK45621.1"
                     /translation="MDDIIFDQINILKERGFVKPGDVVINTGSVPVHLHLPTNVLKIT
                     KVD"
BASE COUNT          554 a          517 c          417 g          640 t
ORIGIN      
        1 atccttatat cgcttttgat aaaatctttt tcatcgcagt gatagatatc aataaactgc
       61 tgcggatttc tgtctgcaag cggaaaccag ctactctgta tctggaccat gatgcgatgg
      121 ccggttttaa aagtatgtgc aacatcaggc aaattgaatt ttacttcttc aacttcaccc
      181 ggcataaagg cctccggatt ttcatagctt ttgcggtaac ggccgcgaaa aatttcagca
      241 cgtactaaca tttcataacc gcccatcggg taaatgtttg gagcatcttc cactgcgtaa
      301 atatccacat cgttaaagcc catgtattca gggaacacgt cgatgatctt taccacaaaa
      361 tccgcgtctg tcgttgagat gcttgtcaac aggtctgcga tcacacttcc cgttaccgtt
      421 atgtctttag ttaatgtatc tgttttaaat gttagtacat ccggccgacg ctcggcaaaa
      481 cgctggtctg catccatgta agttctcgac cggttgaaat gtacgtcttc ttcatatggc
      541 gcgggtttat ttgggtcact tgtatactcg ctatactttg cgtcacttgt tccttcggat
      601 tcactccacc ctagttttcc atcaggctgc aaatacaatg tcttgtcttc cttatttgcg
      661 ggaggccatg ccgaaaacga tcgccatttg tttgctcccg tgataaaaat attcgcctcg
      721 gcaatgctgt cagtattccc tttgcctttt agaaaataat tgaaaaaagg aatttcaaga
      781 tgttgttgaa aatatgctgc ggtgttgctg ccgaattgaa cattgccaag atgaccgccg
      841 tcagtagttg cccactggct atgataccat ggcccttcca caatcttatt aaatgatttg
      901 cctggattat tttcttcggc tgctttataa gaattccatg ctccccaaca atcttctgca
      961 tcaaactcgc cgcctaccca taacattgcc ggttgtaact tctttgttgc attgcgtgca
     1021 tcacgcgctt tccaccacgc atcatagttc ggatgactca tgaggtcttt ccaaaacgcg
     1081 atcgtatcac ccatgtacct cgtcaggttt ttcaaactgc ccgcttcaag gaagaactta
     1141 taattatcgt gatcaggata acctatcgat cgtgctgaat ctgcagtggg acgagggtgt
     1201 ggttgtccga agccaaagcc gagcgctgaa taaaaatcga atgcgtccat ttgaaagaaa
     1261 acaccattgt ggtgaaagtc atctccgatg aaccaattag taacgggagc ctgtggactc
     1321 acggctttca acgcgggatg attgcttgct gcagccattg ttgaataaaa gcccggatag
     1381 gaaattccat gaacgccgac tttgccattg ttgtgagaaa tatttttcac cagccagtcg
     1441 atagcatcat aagtatcgct cgcttcgtca atttcttttc ccgatttatt cggattgaac
     1501 ggccgcacat ttacaaactc gtcttcgctc atccaccttc ccctcacatc ctgcacgacc
     1561 atgatgtaat gctctttgaa atattctttt aaatacccgg tccaccaggc aggatcaaac
     1621 ttgttctctc catacggagc gcaggaataa ggtgtccgtt ccatgaggat cgggtgcaat
     1681 tctgttgtgt ccttgggaac atacacagca gtaaataatt tcttgccatc tcgcatcggg
     1741 atgtaaactt cctttttcgt gtaattgttt acgatccaaa cggaatcaat gtcctgtccg
     1801 atagcgccgc cgcaggcaag aagcaaaaaa aacgcaggca attttttcat acttaaagat
     1861 taaaaacgaa tgctgtttgc ttaagtatac gttccattca agaaactcat tactcatcat
     1921 tcatcactca tctcatgtat tttctacaca aaaaaatccc ccgattttcg ggggcgtacc
     1981 taatcaactt ttgtaatttt cagaacattc gtcggcaagt gcaggtgcac cggaacactc
     2041 ccggtgttaa ttactacgtc gcctggcttt acaaaacctc tttccttcaa aatatttatc
     2101 tgatcgaaaa tgatgtcatc caggctta
//
LOCUS       DASQJI010000380         2967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_502825,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000380 DASQJI010000000
VERSION     DASQJI010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502825"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1235
                     /locus_tag="VEV83_10670"
     CDS             <1..1235
                     /locus_tag="VEV83_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite reductase"
                     /protein_id="HYK45622.1"
                     /translation="DVDERLQKLGARRLVNIEKCDTDYEASADEWFAGVLEKINSTPA
                     EPTVSRHVVNKPTTGKKIYKGTIVNNINLNDRGSKKETHHIEIVADAVEYSPGDSIGV
                     IPENKLSCVETILELTSIQRDKVLSYRNQASTVFELLKRKLNIGQLPQRVVKKYAAIV
                     EQDIPEQDISIIDLLKIYPVKDSQQFEEVIQILEPITPRLYSISSSPQAHEGEVHITV
                     ARDKFYVNEEQRYGLCSDLLTQMADDAHIEFYVQKNNQFRLPADEKDVIMIGPGTGIA
                     PFRSFISERDAVGGAGRNWLFFGDQHFTTDFLYQTEILNWVNTGVLSKVHVAFSRDQE
                     EKIYVQHKMKKHGAEFFNWLDSGAYVYICGTRDPMSADVERTILQIIEEHGNRTKEQA
                     QEYLDELKAVGRFAKDVY"
     gene            1400..>2967
                     /locus_tag="VEV83_10675"
     CDS             1400..>2967
                     /locus_tag="VEV83_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     hemoprotein subunit"
                     /protein_id="HYK45623.1"
                     /translation="MASDALRGTLAQSLEDELTGAIREPDQALIKFHGMYQQDDRDVR
                     EQRSAKKLEWLYSYMIRLRVPGGFFTPLQWIGLHHIAGEHSTGAIKITTRQTIQLHGI
                     LKSHIKPTIKAFNTLHLDSIAACGDVNRNVVCSAHPKQSAIHDQVFDYAGKISALALP
                     KTNAYYEIWLDEEKIGDKKLEEDPLYQDRYLPRKFKIAIAIPPNNDVDVFTNDLGLIA
                     IIENNELKGFNIAVGGGLGATHGNDETYPRLGTILGFVSGEEKVLKAAYEIITIQRDH
                     GNRSDRKFARLKYTLDRMGIDPFKLELEKRCGFKLETPRPFEFTERKDYFGWHQNHVG
                     RWYYTVFVENGRVLDNKKQALKTALYEIAKTGKANFRFTCNQNIIVSDVDAADKDAIE
                     NILREFNVISQTEQASAVRKNSIACVALNTCPLALAEAQRYLPSLITKIETLLDKYQL
                     TQEELSVRMTGCPNGCGRPYVAEIGFVGTAYGEYNVHLGGDRLGMRLNKKYKEKLNEK
                     AILDELDNLFAVYS"
BASE COUNT          934 a          626 c          711 g          696 t
ORIGIN      
        1 aggacgttga tgaacgtctg caaaaattag gggcacgacg tttagtgaat atcgaaaagt
       61 gtgatacaga ctatgaagcc agcgctgatg aatggttcgc aggcgtgctt gagaaaatca
      121 attcaacacc ggcggagccc acggtgtcca ggcatgtagt aaataaacca acgacaggaa
      181 aaaagattta caagggtacg atcgtaaaca acattaattt aaatgacaga ggctcaaaga
      241 aagaaacaca tcacatagaa attgttgcgg atgcggttga atattcacca ggagattcaa
      301 ttggtgtaat acctgagaac aagttaagct gtgtcgagac aattcttgag ctcaccagca
      361 tccagcgcga caaggttctt tcctatcgca accaggcatc aacggtgttt gagctgctta
      421 aacggaagct taacatcggt caacttccgc agagggttgt aaaaaagtat gctgcaattg
      481 ttgagcagga tatacctgaa caggatatca gcattattga cctgttgaaa atataccctg
      541 taaaagactc acaacaattt gaggaggtta tccagatcct tgagccgata acgccgagat
      601 tatactcgat ctcctcttcg ccgcaggctc atgagggcga agtacatatc actgttgcac
      661 gggataaatt ttatgtaaat gaagagcaga gatatggttt gtgttcggac ctgttaacgc
      721 aaatggcaga cgatgcgcac attgaatttt atgtacaaaa gaataaccag ttccgcctcc
      781 cagccgatga aaaagacgtt atcatgatag gccccggcac aggtattgcg ccttttcgtt
      841 cattcatttc agagcgcgat gcggtcggcg gagcagggcg caactggctt ttcttcggag
      901 accagcactt cactacagac tttttgtatc aaacagagat cctgaactgg gttaataccg
      961 gcgtgctgag caaagtgcat gtcgcttttt caagggacca ggaagagaaa atttatgtgc
     1021 agcacaagat gaaaaagcat ggtgctgaat tttttaattg gctggactca ggcgcgtatg
     1081 tatatatctg tggtacgcgc gatcccatga gtgcggatgt agaacggacg atcttacaga
     1141 tcattgaaga acatggaaac aggaccaaag aacaggcgca ggaatattta gatgaattga
     1201 aagccgtggg ccgattcgca aaggatgtgt attgaggtga tcccgttcga tcgcggattg
     1261 gggcactcca aaacagtaaa acgaaactgt gtattgatca acgcacatgc taaccgcaaa
     1321 tttattacac gcaaacaaaa actcccttta gggttggggt atggcagaac aaactttatc
     1381 accagtcgaa aaaataaaaa tggcaagcga cgcccttcgc ggtacgcttg cacagagtct
     1441 tgaagatgag ctcacgggcg caatacgcga accggaccag gcgctgatca agttccatgg
     1501 catgtaccag caggatgatc gcgatgtaag ggaacaaagg agcgcaaaaa aacttgaatg
     1561 gctgtattct tacatgatcc ggctacgcgt gccgggcgga tttttcacgc cattgcaatg
     1621 gatcggcctt catcatattg ccggcgaaca ttcaacgggt gctatcaaga tcactacacg
     1681 gcaaactata caactgcacg gcattttaaa atctcatatt aagccgacca taaaagcttt
     1741 caacaccctg caccttgatt cgatcgctgc gtgtggcgac gtcaaccgga acgtcgtgtg
     1801 cagtgcacat ccgaaacaat cagcaattca tgaccaagtg tttgattatg ccggaaaaat
     1861 aagtgccctc gctttaccga aaacaaatgc ttattacgag atctggctcg atgaagaaaa
     1921 gatcggtgac aagaaattag aagaagatcc attgtaccag gatcgctacc tgccgagaaa
     1981 atttaagatc gcaattgcga tccccccgaa taacgatgtg gatgttttta caaacgacct
     2041 ggggctgatc gcgatcattg aaaacaatga actgaaaggt ttcaacattg ctgtcggcgg
     2101 aggacttggc gctacacatg gcaatgacga aacgtacccg aggcttggga ccatcctcgg
     2161 attcgtaagt ggcgaagaaa aggtattaaa agcggcttac gagatcatca ccattcagcg
     2221 cgatcacggt aaccgcagcg atcgaaagtt tgcgaggcta aaatacacgc tcgacagaat
     2281 gggcattgat ccatttaagc ttgaactgga aaaacgttgc ggctttaagc tcgaaacacc
     2341 aagaccgttc gaatttactg aacgaaagga ttattttggc tggcaccaaa atcacgtggg
     2401 aagatggtac tacactgttt ttgttgagaa tggccgcgta ctcgataaca aaaagcaggc
     2461 tttgaaaact gctttgtatg agatcgcaaa aacaggaaag gcaaatttca ggttcacatg
     2521 taatcaaaat attattgtga gtgatgttga tgcagcagat aaagatgcaa tagaaaatat
     2581 acttcgcgag tttaacgtaa tttcccaaac ggaacaagca agcgcggtta gaaaaaactc
     2641 gatagcctgc gttgccctaa atacttgccc gcttgcatta gcagaggcgc aacgttatct
     2701 tccatcgctg ataaccaaaa tcgaaactct cctcgacaaa tatcaattaa cacaagaaga
     2761 actaagtgtc cgaatgactg gatgtccgaa tggctgtgga aggccttatg ttgccgagat
     2821 cggtttcgtc ggaactgctt atggtgaata taatgtgcat cttggcggcg accgccttgg
     2881 aatgcgatta aacaaaaaat acaaagagaa actcaatgag aaagcgattc ttgatgagct
     2941 cgataatcta ttcgccgttt acagcaa
//
LOCUS       DASQJI010000381         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1270143,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000381 DASQJI010000000
VERSION     DASQJI010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270143"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VEV83_10680"
     CDS             <1..1110
                     /locus_tag="VEV83_10680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015295 - solute:proton symporter activity
                     [Evidence IEA];
                     GO_process: GO:0015718 - monocarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate:H+ symporter"
                     /protein_id="HYK45624.1"
                     /translation="MLGKLIAESGAAQKITTSLVDAFGKKYIMWAMVLTAFIVGIPLF
                     FDVSFVLMVPLIITVSKRYDLPVVYIGLPMVAALSVTHGFLPPHPAPTGLVKQYNADL
                     GLTLLYGFMIAIPAVIIAGPMFAPTLKKYKNKPPETFASKDLKDEELPGLFNSVFTTF
                     LPVLLIAIGTICQQLIAQQNAVTKFFIGIGDPPIAMIIAVLYALYSLGLKRTRSMSVL
                     MNHLVDSVKDISLILLIIAGAGAMKEILTETGVNTQIAALLNNLNVHPLLAAWSIAAV
                     IRIALGSATVAGLTTAGIIAPIIATSGVNPNLMVLATGAGSLIFGHVNDGGFWLFKEY
                     FNLSLKETFLTWSVMETIVSVIGLIGVFALNYFIH"
     gene            1219..1686
                     /locus_tag="VEV83_10685"
     CDS             1219..1686
                     /locus_tag="VEV83_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HYK45625.1"
                     /translation="MTPDEKFEQLNLELPPAPAPIGVYKPCLVVGNLVYVSGHGPLIK
                     EKTFITGRIGEGMDADEGKLAARQVGLTILATLKKNLGSLNRIKRVIKVLGMVNCTPD
                     FERHPFIINGCSELFAQIWGEDNGVGVRSAVGMGSLPDNIPVEIEAIFELRDL"
     gene            complement(1731..>2132)
                     /locus_tag="VEV83_10690"
     CDS             complement(1731..>2132)
                     /locus_tag="VEV83_10690"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK45626.1"
                     /translation="KCQPYGSDQRIHIPSNTLFTYPDISIVCGEIITLNEDEFNVLNP
                     SVIIEVLSRSTKNYDRGEKFKLYRDIATLKEYILVDSESVHIEVFRLNDRNHWELEEY
                     HDMADFVAIKAINEDISVADIYDGVKMQLTS"
BASE COUNT          597 a          412 c          471 g          652 t
ORIGIN      
        1 atgcttggta aactgattgc ggaaagcggt gccgcacaaa aaataacgac aagcctggtt
       61 gatgcttttg gaaaaaaata tatcatgtgg gccatggtgc ttacggcttt catcgtaggc
      121 atccctcttt tttttgacgt gagttttgtg ttgatggtac cgctgattat aaccgtttcg
      181 aaaagatatg atcttcccgt cgtttatatt ggtttgccaa tggtagctgc gttgtccgta
      241 acacatggat ttttgccgcc gcacccggca ccaaccggtt tggtaaaaca atacaacgca
      301 gatcttggac tgaccttgtt atatggattt atgattgcca ttcccgctgt gatcattgcg
      361 ggacctatgt ttgcgcccac attaaaaaaa tataagaaca agccacccga gacatttgct
      421 tcaaaggatt tgaaagatga agaattacct ggtttattca atagcgtttt tacaactttt
      481 ttacctgttc ttttaattgc aataggaacg atttgccagc agttgatagc acagcaaaat
      541 gctgtaacca aattttttat tggtattggt gatccgccaa ttgcaatgat aattgctgta
      601 ctgtacgcgt tgtatagttt gggtttgaaa agaacaagat caatgagtgt tttaatgaat
      661 catttagttg attcggtaaa agacatttcg cttattttat tgatcatcgc cggtgccggc
      721 gcgatgaaag aaatccttac agagaccggt gttaatactc aaatagcagc tttactaaat
      781 aatttgaacg ttcatccttt acttgccgcc tggtcaatcg ccgcagtgat tcgtattgca
      841 ttgggttccg caaccgttgc gggcttaacc actgccggaa ttattgcgcc catcattgca
      901 acatcgggtg taaatccgaa tttaatggta cttgcaacag gcgcaggcag tttgatcttt
      961 ggtcatgtga atgatggtgg attttggttg ttcaaggaat attttaattt gtcgttgaag
     1021 gaaacattcc tcacgtggag tgttatggaa acaatagttt cagtaattgg gttgattggc
     1081 gtgtttgcac tgaattattt tatacactaa gatcgtcaat cgctgcctga acgtcgggca
     1141 aggtcaatca tgaatcggga ataaaaaaaa taaacttaac tctcttctcc cttcaggggc
     1201 gggacaaact tttaatgtat gacgccagat gaaaaatttg aacaattgaa tctcgaatta
     1261 ccacctgcac cagcaccgat cggtgtctat aaaccctgcc ttgttgttgg taatctcgtc
     1321 tatgtttcag gtcatgggcc attgataaaa gaaaaaacat ttattaccgg ccgcatcggc
     1381 gaaggcatgg atgcagatga aggcaagctc gccgcacgcc aggttggatt aaccattctt
     1441 gcaacgctca aaaaaaatct tggctcgttg aatcggataa aacgcgtgat aaaagttttg
     1501 ggcatggtta attgcacacc tgattttgaa agacatccgt ttattatcaa tggttgcagc
     1561 gaattgttcg cgcaaatttg gggagaagac aacggagtcg gtgtgcgcag tgcagttggc
     1621 atgggttcat tgcccgacaa cattcctgtg gagatcgaag caatatttga attacgtgat
     1681 ttgtaaaaac ggtcagacac ttcgaaagcg tcagactgct acgagccggt ttacgaagtc
     1741 aattgcatct taactccgtc ataaatatca gcaaccgaaa tatcttcatt tattgctttg
     1801 atggcaacaa aatcagccat gtcatggtat tcttcaagtt cccaatgatt gcggtcgttt
     1861 aacctgaata cttcgatatg cacactttcc gaatcaacca ggatatattc ttttaacgta
     1921 gcgatatctc ggtatagttt aaatttttcg ccacggtcat aatttttagt tgaccgggaa
     1981 agcacttcaa taattacgga tgggtttaag acgttgaact catcttcatt gagcgttatt
     2041 atttcgccgc aaacaatcga aatatcggga taagtaaata atgtgttgga cgggatatga
     2101 atacgctggt cgcttccata aggttggcat tt
//
LOCUS       DASQJI010000382         5932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1885966,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000382 DASQJI010000000
VERSION     DASQJI010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5932
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885966"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VEV83_10695"
     CDS             <1..237
                     /locus_tag="VEV83_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45627.1"
                     /translation="DNGPGIPQNIVDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGG
                     EIKVETLPVSPSRNFGAGEDGRAEGTEFIITLPA"
     gene            321..3704
                     /locus_tag="VEV83_10700"
     CDS             321..3704
                     /locus_tag="VEV83_10700"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45628.1"
                     /translation="MAGFNRLITLLACSLCVAVSYGQLNSGNLTQYTERDGLPGVQVS
                     SLLVDRFGYIWAGTINGLVRYDGYEFKRFYSDPNDSTAIRGLPVYAMFEAHDGRIWIG
                     SGPSFLNMYDPIHKTFKHYDFASLVDHPANVELDIVSMCEDHNGRIYFGISTYGGELV
                     TNALLYKDEKDDHLEVFQTPDSLKIRNVLSLGTDRSGNVICTSFSGAVKIDPAGKLIG
                     RIGISLGKEFMANNDVPTDFKFDRRGHIWLISANDRLYDVDPATDHYKIWAPTINPAS
                     RNVNMRKAIAIDKNDNVWLATDDGIRFFNTKTNQFSSFNNGTKKELEHVQAIELKFDS
                     FGTLWIGTNAEGLIKYENRPQLKSYVFNKADKNSITPGWANSICESSDGKLWIATNGY
                     PASGIDMLDLRTGELVPIKFSDLSINNNSGYSIWQNAPGEIYLGLFQRTYALSIDTRI
                     ARPVTLPGLPASATVRSHLTDSRGTEWLCTFAGLYKRDRRSPRFSKYDLSTVTGSNAA
                     SNMISNVYEGKYGLWMLTDNGLYLYNYKTGKSERHGYDKQAGDVFLSQDINSFYEDPH
                     GIAWVGTWQGGLSKYDLQTKKIKTYTQDDGLPSMCIQSIVADEKNNSLWLSTFDGLSR
                     FDLKTGQFNNFSIADGIQGQLFADGSFAKTSGGLFAFGGSNGITIFNPNEIVLNSIPP
                     KVFLTDLRISNKPVLPGPKSILKKPIYETSEITLPYNQNTLSIEFIALHYSNPAKNKY
                     SYKLENYDNEWREVGNQHVAFYPKLSPGEYVFRVKAANDKGVWNETGASLKIIINPPW
                     WRTTWAYFLYAVLVLCIVFGINRYVHKRIIAKEREKNRVRELQQAREIEKAYYKLEEA
                     HEALKATQSQLIQSEKMASLGQLTAGIAHEIQNPLNFVNNFSEVNIDLIKELKNERSK
                     PQEQRDEAAQDDIIHNLEDNEEKIVLHGRRADAIVKGMLQHSRTSSGQKDPIDINNLA
                     DEYLGLSYHGMRAKDKTFSATFETKFDETIGKINVIPQDIGRVLLNLYNNAFYAVNER
                     RKTGGEGYKPKVSVSTKRLNSRSGDGGVEIRISDNGPGIPQNILDKIFQPFFTTKPAG
                     GGTGLGLSLSYDIVRAHGGELKVETRENKGSEFIIRLPA"
     gene            3775..5088
                     /locus_tag="VEV83_10705"
     CDS             3775..5088
                     /locus_tag="VEV83_10705"
                     /inference="COORDINATES: protein motif:HMM:NF040152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pycsar system effector family protein"
                     /protein_id="HYK45629.1"
                     /translation="MIYRMANSVFSAGIEIKTILPTKKFPNMQYDELLQRVAEHVALF
                     YAEHPDRRLAYHNQKHITQTVNTVKKMSAWYKLNERDHFIVCAAAWFHDAGFLCSETN
                     DHEAKSAALAAKFLQTLSVDEPTIEEVSKCILATRLPQSAVSLPEQILCDADLFNLGT
                     PDFEESNRRVRKEHEELDGTKIKKREWREKTINLLEAHTYYTEYCRLLLDETKAVHLD
                     ELKRKQEEKLSETTEDFAAGQPTVEKATEVTTAATSKKNKKQKPPGRGIQTMFRVSFA
                     AHQQLSALADNKAHIMISVNSIVISVTFGLVLRNFSTDSYHLVIPTILLLLVNVTTII
                     FSVLATRPKIHPGFFTKEQLKERKVNLLFYGSFYKMKYDAYEEGMRNMMDDPDFLYGT
                     MIKDIYWQGRVMGRKFRLLHISYNIFMYGIALVVISYGIAALIAL"
     gene            5645..>5932
                     /locus_tag="VEV83_10710"
     CDS             5645..>5932
                     /locus_tag="VEV83_10710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45630.1"
                     /translation="MSLKTISIIAVFICSLSCTQKQEASHYNLIEPTVVEAKGDIVLK
                     EKMATPQSVPIGKLKVVTAGKPTVVPVPTNIHLAGIPRTVIAGAPKICTPGK"
BASE COUNT         1806 a         1260 c         1373 g         1493 t
ORIGIN      
        1 gataacggcc ccggcattcc ccaaaacatc gttgataaaa ttttccaacc cttcttcacc
       61 accaagccaa caggcgaagg aacagggctg ggtttgagtt tgagttacga catcataaaa
      121 gcgcatggcg gtgagataaa agtggaaact ctgcctgtat cgccttcgcg taacttcggg
      181 gcgggcgagg acggacgggc ggagggaaca gagttcatca tcacgctacc cgcttagtgg
      241 ggcaccaaat tcattattat ttatcttcaa gccaaattta tgtgcactcc tgctgcagct
      301 gaaaagttca attactaaca atggctggat ttaaccggtt gattactttg cttgcttgtt
      361 ctctgtgtgt tgccgtatca tatggacagc tcaactcggg taatttaacc cagtatactg
      421 aaagggacgg cttgcccgga gtgcaggtaa gcagcctgct cgtagacagg tttggttata
      481 tatgggccgg tacgatcaat ggactcgtgc gctatgacgg ttacgagttt aaaagatttt
      541 attctgatcc gaatgatagt actgccattc gagggttgcc ggtgtatgca atgtttgagg
      601 cgcacgatgg ccgcatatgg attggctccg gtccctcgtt ccttaacatg tacgatccga
      661 ttcacaagac tttcaaacat tatgatttcg caagcctcgt agatcacccg gccaatgtgg
      721 aactcgatat agtgtcaatg tgtgaggacc acaacggcag gatctacttt ggaataagta
      781 cttacggcgg tgaactggtc acgaatgccc ttctgtataa agatgaaaag gatgatcatt
      841 tagaggtgtt tcaaaccccc gatagcctga aaattcgaaa tgtcttatcg ctgggaaccg
      901 accggtcggg caatgttatt tgtacttcgt tttccggtgc tgttaagatc gatccggcag
      961 gaaagttaat tgggagaata ggcatttctc ttggcaagga attcatggct aacaacgatg
     1021 tgccgacaga ctttaagttc gacagacgtg gccatatatg gctcattagc gcgaacgatc
     1081 ggttatacga tgtcgatcct gcgacggatc attacaaaat atgggcaccg accatcaacc
     1141 ctgcttcgag aaatgtcaat atgcgcaagg caattgcgat cgataaaaac gataacgtat
     1201 ggttagcaac agatgacggc atcaggttct ttaacacgaa gacaaatcaa ttctcatctt
     1261 ttaataacgg aacaaaaaaa gagctggaac atgttcaagc aatagagtta aagtttgaca
     1321 gtttcggaac gctgtggata ggcactaatg cagaaggcct gatcaagtat gaaaacaggc
     1381 cgcagcttaa atcgtatgtt ttcaacaagg cagacaaaaa ttctataaca ccgggttggg
     1441 caaactcgat ctgtgaaagc agcgatggta aattatggat cgcgacaaac ggctatccgg
     1501 cgtcaggaat agatatgctg gatctacgca ccggtgaact ggtgccaata aagttttccg
     1561 atctgtcgat aaacaataac agcggttatt caatttggca aaacgctccg ggcgaaattt
     1621 acctgggact tttccagcga acctatgctc tttcaattga cacccgtata gcacgcccgg
     1681 ttacgttacc tggccttccg gcgtccgcta ccgttcgatc gcatttaaca gacagcaggg
     1741 gaaccgagtg gctatgcact ttcgccggcc tttataagcg cgatcgccga tcaccgcgat
     1801 tcagcaaata cgacctcagc acggttaccg gcagcaatgc tgccagcaat atgatctcaa
     1861 atgtatatga gggcaagtac ggtctatgga tgcttaccga caacggattg tacctgtaca
     1921 attataaaac gggaaaatca gaaagacatg gatatgataa acaagcagga gatgtttttt
     1981 tatcgcagga cattaattct ttctacgagg atccgcacgg tatcgcatgg gttggtacgt
     2041 ggcagggcgg gcttagcaag tatgatcttc aaacaaaaaa aataaagacg tatacgcagg
     2101 acgatggttt gccttctatg tgcatccaat ccattgttgc agacgaaaaa aataattctt
     2161 tatggctaag cacttttgat ggattaagca gattcgattt aaagacgggg caattcaata
     2221 acttctcgat tgccgacggt atccagggcc agttatttgc tgatggttca tttgcaaaaa
     2281 catccggtgg cctgtttgca tttggcggct caaacgggat cacgatattc aatccgaacg
     2341 agatcgtttt aaattccatt ccgccaaaag tttttttaac cgatctaagg atctcgaaca
     2401 agccggtgct tccgggccct aaatcgatcc tgaaaaaacc gatttatgaa accagcgaga
     2461 tcacgttgcc atacaatcag aatacacttt caatagaatt tatcgcgctt cattattcta
     2521 atccggcaaa gaacaagtac agctataaat tagaaaacta cgataatgaa tggagggaag
     2581 taggtaacca gcatgttgca ttttacccga aattatcgcc gggtgaatat gtatttcgtg
     2641 taaaagccgc aaacgacaaa ggcgtgtgga acgaaaccgg ggcgagtctt aagatcatca
     2701 tcaaccctcc atggtggaga acaacgtggg catatttctt atatgcggtg ctcgtgttgt
     2761 gcattgtgtt tggaattaat cggtatgtac ataagcgcat tattgcaaaa gaaagagaga
     2821 aaaatcgtgt gcgtgaatta cagcaggcgc gcgaaataga aaaagcttat tataaactcg
     2881 aagaagcgca cgaagctttg aaggcaacgc agtcgcaact catccaatct gaaaaaatgg
     2941 cttcacttgg acaactgact gccggcatcg cgcacgagat acaaaacccg ctcaattttg
     3001 taaataactt ttccgaagtg aatatcgacc tgataaagga gctgaaaaac gaacggtcaa
     3061 aaccgcagga gcagcgtgat gaggcagcgc aggacgacat catacacaac ctggaagaca
     3121 acgaggaaaa gatcgtgctg cacggaaggc gcgccgatgc gatcgtaaaa ggcatgctgc
     3181 aacattcgcg caccagtagc ggccagaaag atccgatcga cattaacaat ttagccgatg
     3241 aatatttggg gttaagctat catggtatgc gcgcgaaaga taaaacgttc agcgccacat
     3301 ttgaaaccaa gtttgacgag accatcggaa aaataaacgt cattccgcag gatatcggga
     3361 gagtattatt gaatttatac aacaatgcat tttacgcggt gaatgaaagg cgaaaaacag
     3421 gaggcgaagg gtataaacca aaggtttcag tttctacgaa gcggttaaac tcccgttcag
     3481 gtgacggggg cgtcgagatc cgtatttcag acaatggtcc cggtattcct caaaacattt
     3541 tggacaagat ctttcagccg ttttttacaa ccaaaccggc cggaggaggg acgggattgg
     3601 gtttaagttt aagttatgac atcgtgagag cacatggtgg tgaactaaag gttgaaacca
     3661 gggaaaataa gggcagcgag tttataatcc ggctccctgc gtagctttga cataagcaaa
     3721 agaaaagcca taacgcaaac cgatttcata cgccgaaaac gccgcctgaa gtgaatgata
     3781 tacagaatgg cgaattccgt attttcggcc ggcattgaga taaaaactat attgccaaca
     3841 aagaagtttc ccaacatgca gtatgatgaa ttactacaaa gagtggccga acatgtcgcc
     3901 ctgttttatg ctgagcatcc ggatcgcagg cttgcgtatc ataatcagaa gcatataacc
     3961 caaacggtaa acaccgttaa gaaaatgtct gcctggtata aattaaatga gcgcgatcat
     4021 ttcattgttt gcgcggctgc gtggtttcat gatgcaggtt ttctttgttc agaaaccaat
     4081 gaccatgaag cgaaaagtgc agcactggcc gctaagttct tacaaacctt gtccgttgac
     4141 gaacccacta tcgaagaagt tagcaagtgt attctcgcta cccggcttcc gcaaagcgcc
     4201 gtttctttgc ccgagcagat cctctgtgat gcagacttgt ttaatcttgg cacgccggac
     4261 tttgaggaat cgaatcgccg ggtgagaaaa gaacatgaag agctcgacgg gacgaaaata
     4321 aagaagcgcg aatggcgcga aaaaactata aatctcctcg aagcgcatac gtattatacg
     4381 gaatattgcc gcttattact cgacgaaaca aaggccgttc acctggacga attaaaacgc
     4441 aaacaagagg agaagttatc agaaacgacc gaggatttcg ctgccgggca accaactgtt
     4501 gagaaagcaa ctgaggtgac caccgcggcc acttccaaaa aaaataagaa gcagaagcct
     4561 cccggcagag gaattcaaac gatgttcagg gtttcattcg cagcacatca gcagctaagc
     4621 gctttggcag acaataaagc gcatatcatg atatcggtga attcgatcgt gatatccgta
     4681 acatttgggt tggtgctgag aaatttttca acggacagct accaccttgt gatcccaact
     4741 atattattgc tcctggtaaa cgttaccacc attatctttt ctgtgcttgc aacaaggcca
     4801 aagatccacc cgggattttt taccaaagaa cagttgaaag aaagaaaggt caacttgctt
     4861 ttttatggca gtttttacaa gatgaaatac gatgcctacg aagaaggtat gcgtaatatg
     4921 atggacgatc cggatttttt gtacggcacg atgatcaaag atatttactg gcagggacgc
     4981 gtgatgggca gaaaattcag attgctgcat atttcataca acatttttat gtatggtatt
     5041 gcgctcgtcg ttatttcgta tggcattgca gcgctgatag ctttatgacg gaccggtgag
     5101 tgtattgaaa actgccgtat gcgagcaagg gataaaaatt tcaatgcaaa gcttgaaacg
     5161 aatttttgat tcaatcactt gaaaagataa atgccgtgcc ctgtgtcccc gccgtcatct
     5221 tttacggaaa tgaatatttt gtaggcagct ttttttgcgt caacggttga aataaccatt
     5281 ctttaccacc aaaccaacag gccctggtct caataggaca tcataaattc gaaggggtat
     5341 ggcatagacc aggggaatta tccgtataca cctgcatatt tatttggcat taacctgaat
     5401 ttttaattac caaattttat tgaggccaaa gcgctttggc attccggctg atgacgataa
     5461 tatcagccac aatgcattaa aaaggaatct gcaacgcgca catgttttcg tgcttgcgac
     5521 cgtgcttacg gtgatttgtg aattaataaa aataaatcgc gaagtaagaa atcttcttta
     5581 ccttttatca taaatcataa ctgcaacctg gactgacaaa ttattcacaa tatcaagtga
     5641 ggtaatgtca ttaaaaacta tttctatcat cgcagtattt atttgttctc tttcatgcac
     5701 tcaaaagcag gaggcatcac attataatct tatcgaacca acagttgtag aggcgaaagg
     5761 cgatatagtg cttaaagaga agatggcaac tcctcaatca gtccccatag ggaaactaaa
     5821 agttgtcact gctggtaaac caactgtggt tcctgtcccc actaacatcc atctcgcagg
     5881 aattcccaga acagtaatag caggagcacc aaaaatttgc actcctggta aa
//
LOCUS       DASQJI010000383         6163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_350192,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000383 DASQJI010000000
VERSION     DASQJI010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6163
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350192"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VEV83_10715"
     CDS             complement(<1..347)
                     /locus_tag="VEV83_10715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45631.1"
                     /translation="MKTFLLLMLIAVAVCGFLQKLTITVSLQGKSVSASPADENNDKV
                     LVLQRSAASAAAHLVAKVNNEEISAGWKRTFVLYDNEDKEIITLDSMKANCYGVSLQA
                     LLPVLQQPKQYAL"
     gene            complement(429..1475)
                     /locus_tag="VEV83_10720"
     CDS             complement(429..1475)
                     /locus_tag="VEV83_10720"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HYK45632.1"
                     /translation="MPRSFIAGIGMYVPEHVFTNADMMKYMDTNDEWIQERTGIKERR
                     FADRTNETTATMGVEAAKQAIERAGITVDDVDFIIFATLSPDYYFPGCGVLVQRALQM
                     KEIGALDVRNQCSGFIYALSVGDQFIRSGMYKNILVIGSEKHSFGIDFNTRSRNVTVI
                     FGDGAGAVVLQPTEDPDRGILSTHLHSDGNDAEILAMFNPGSHANHWKDGLADYDNAD
                     IGEMFVSHTMIDKNQNVPFMDGPTVFKKAVIKFPEVIMEALDANGYKPSDLTMLIPHQ
                     ANLRISQFVQQKLKLRDDQVYNNIQKYGNTTAASVPLALCEAWQEGKIKTGNLVCLAA
                     FGSGFTWASALLKW"
     gene            complement(1635..2642)
                     /locus_tag="VEV83_10725"
     CDS             complement(1635..2642)
                     /locus_tag="VEV83_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK45633.1"
                     /translation="MFRKKWLRVVLLIMVLLVIAYLAGPHPKAPVYSNVLPAVPSDAS
                     ALDAYIAANEAQHKLKPNNEARIVWFDSSKTKTDYAIVYLHGFSASQEEGRPIHINIA
                     REFGCNLYLSRLAGHGIDTIQPMINLTADELWESAKQALQIGKQIGKKVIVMATSTGG
                     TLALRLASEYPNDIVALVLLSPNVAINNDKAYLLNNPWGLQIARVVTGSHYVTGTDPR
                     PLYKQYWYWHYPLESLVQLQELIETSMTKDIFQNVKQPTLMLYYYKDEKHQDSVVSVP
                     AMLKMYGELGTPANEKIKEAMPDVGDHVMGSYIKSKDLLEVQQAIEQFMTKKLNLQRV
                     P"
     gene            2703..2927
                     /locus_tag="VEV83_10730"
     CDS             2703..2927
                     /locus_tag="VEV83_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HYK45634.1"
                     /translation="MNSQTGKWLIVAGVLIVIVGVLIYFFHDKLNWLGKLPGDIRVER
                     DNFHFYFPITTMIVVSIILTVLINLFRKFF"
     gene            2983..4110
                     /locus_tag="VEV83_10735"
     CDS             2983..4110
                     /locus_tag="VEV83_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HYK45635.1"
                     /translation="MQATASQRFLALDVFRGMTICLMIIVNTPGNEETTFAPLKHAHW
                     NGFTPTDLVFPSFMFAVGNAMSFVMRRWNAMNTRQVLGKIFKRSLIIYLLGFLLYWFP
                     FFTHNEQHRLILSPLSETRIFGVLQRIALAYCFTSLLLYFLKTRATVIITIIILILYW
                     PVLVYFGTGPDPLDLHTNAVLRFDMWLIGPKHLYMGEGFPFDPEGFLTTFPSLANIVA
                     GYLVGLYVQKNGKNFEGLAKLLMAGFALLVIAYWWNYDFPINKKLWTSSFVLHTVGLD
                     CMILACIMYYTDFVGKRKGVNFFQVFGKNPLFIYFVSELSVSILGMIHINDTPLFTWL
                     YENVFSYAGAYTGSLLFAICFMLYCWLVGYFLDRKKIYIRV"
     gene            4423..>6163
                     /locus_tag="VEV83_10740"
     CDS             4423..>6163
                     /locus_tag="VEV83_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYK45636.1"
                     /translation="MGKKLFVSILLVSDLLISCSDNNAQTDAGLVKDNYIKKEFRIPM
                     RDGIRLFTSVYIPKDSSEKYPILMERTPYSVEPYGEDHYPTGLGPNRFFKTEKYIFVY
                     QDVRGRHMSEGNFQEMTPAIDNKKNNTEVDESSDTWDTVDWLLKNIRNNNGKVGIYGI
                     SYPGFYATASLPNAHPAIKAVSPQAPVTDEFEGDDVNHRGAFYLMDNFSFENFFDAPR
                     DGPRQENPPVNRDIDIKDVYAFYLKTGALHNYNDLYFHGRAKIWNEYLQHSTYDSYWQ
                     ARNIRPHLKNIEPATLEVGGWFDAEDMFGALSTYKAIEQQNPKNDNRLVMGPWTHGAW
                     EAGKWDHFAGYTFGGDLNEKFQQIEFDFFNYYLKGKGPFTAGEATIFVTGSNEWRTFK
                     TWPPQGLTKTNWWLNSGHQLLLQKANQSGSDEYVSDPADPIPYINEKSDDRLNKYLAA
                     DQRFASERKDVVYYQSDILQNNFTLLGPITANLYVSTSGTDADFVVKVIDVLPGSNVQ
                     QLVRAEVIRGKFRNSFEKPEPFVPGQPTQIHLQLNDVAHTFLQGHRIMIQIQSSWFPL
                     VDRNPQKFINIPDA"
BASE COUNT         1611 a         1408 c         1370 g         1774 t
ORIGIN      
        1 tagagcgcgt attgtttggg ctgctgcagc actggtagca aggcttgtaa agaaacgcca
       61 tagcaatttg ctttcattga atcgagggtg attatctctt tatcttcatt atcatataaa
      121 acaaacgtac gtttccatcc agcgcttatt tcttcattgt tgactttagc gactaaatgt
      181 gctgcggctg aagctgccga tctttgtaac accaatacct tgtcgttgtt ttcgtcggct
      241 ggactggcgc ttacagattt cccttgaaga gagaccgtga ttgttaactt ctgtaagaaa
      301 ccgcatacgg cgaccgcgat caacatcaga agcaaaaaag ttttcattca ataaatcagt
      361 aatgagtgat cagtaatgag aatcttaact cggcaacatc aaacatcaaa cttcaaacat
      421 caaacattct accacttcaa caatgcactt gcccaggtaa aaccgcttcc aaatgcagcg
      481 aggcaaacga ggttccccgt ttttattttt ccttcctgcc acgcttcgca taacgcaagc
      541 ggaacagagg ctgctgttgt gttcccgtat ttctggatat tgttatacac ctggtcatcg
      601 cgcaacttta atttctgctg cacaaactgg ctgatgcgca agtttgcctg gtgcggaata
      661 agcatagtaa gatcggaggg cttgtagcca tttgcatcga gcgcctccat gatcacttcg
      721 ggaaatttta tcacggcttt cttaaataca gtaggaccat ccatgaacgg aacattttgg
      781 tttttgtcga tcatcgtatg actaacgaac atttcgccaa tgtcagcatt gtcgtaatcg
      841 gccaaaccat ctttccaatg atttgcgtga gacccgggat tgaacattgc aagtatttct
      901 gcatcgttgc catcactgtg caaatgcgta ctcaaaattc cacggtcggg atcttcggtt
      961 ggctgcagta ctaccgcgcc ggctccatcg ccaaagatga cggttacatt tcggcttcgt
     1021 gtgttgaaat cgataccgaa ggaatgcttt tcgcttccga tcacaagaat gttcttatac
     1081 atgccgctcc gtatgaactg atcgcctaca cttaatgcgt aaataaaccc actgcattga
     1141 ttgcggacat cgagcgcgcc gatctctttc atttgtaaag cacgttggac cagcacgcca
     1201 cagccgggga agtaatagtc gggcgaaagc gtggcgaaga tgataaagtc aacatcgtct
     1261 accgtgatcc cagctctttc tattgcctgc tttgcagctt caacacccat tgtggccgtt
     1321 gtttcgtttg tgcgatccgc gaagcgacgc tctttgatac cagtacgttc ctgtatccat
     1381 tcatcgttgg tgtccatata cttcatcata tctgcattgg tgaaaacgtg ctcaggtaca
     1441 tacatcccga tcccagcaat aaaacttcgt ggcatacgat cttaatttac ctcaaaataa
     1501 ctacattttt gagttgtggt tcggagaata aatgatacgg aaatcatggt cagcagtcca
     1561 ccgtcatgcg cattcgaaaa gcgcagcatc acaaatcggg gaagcgttgt aaaagatcgc
     1621 tactgcacgc gctgctacgg cacgcgctgt aaatttaatt ttttggtcat gaattgttcg
     1681 atggcctgtt gcacttccaa taagtctttc gacttaatat agctgcccat cacatgatcg
     1741 ccaacatcag gcatcgcttc ttttattttt tcgttagcag gcgttcctaa ctcaccgtac
     1801 atttttaaca tggcaggcac actgactacg ctgtcctggt gtttctcatc cttatagtaa
     1861 tacaacatca gcgttggttg ctttacgttt tgaaaaatat cttttgtcat gcttgtttca
     1921 atcaattcct gcaactggac caatgattca agcgggtaat gccaatacca atattgctta
     1981 taaagcggcc gggggtcagt tccagttaca taatggctgc cggttacaac cctcgcgatt
     2041 tgcagtcccc acgggttgtt taaaagataa gccttatcat tattgatggc cacgtttggt
     2101 gaaagcaaca cgagcgcaac tatatcgtta gggtattcgg acgccaacct gagtgcaagc
     2161 gttccacctg tggaagtagc catcacgatc actttcttcc cgatctgttt tccgatctgc
     2221 aatgcctgct ttgcactttc ccaaagttcg tcggcagtta agttgatcat cggttgtata
     2281 gtgtcgatac catggccggc gagcctgctt aaatataagt tgcagccaaa ttcacgcgca
     2341 atgttgatat gtatcggccg tccctcttcc tgcgaggcgg aaaatccgtg gaggtatacg
     2401 atcgcataat ctgttttggt cttcgacgaa tcgaaccata caatgcgagc ttcattgttt
     2461 ggtttcaatt tatgctgcgc ttcgtttgca gcaatgtatg cgtcgagtgc gctggcatca
     2521 gatggaactg ctggtaaaac gttcgaatac acgggagcct ttggatgcgg gccggcgaga
     2581 tatgcgataa caagcagaac cattatcagc aagacaactc ttaaccattt tttgcgaaac
     2641 ataagcaatc atgttttaat aaggaagtaa atttataatt gattaatgaa agtcgttgtg
     2701 ttatgaattc tcaaaccggt aaatggctga tcgttgcggg cgtcttgatc gttatcgttg
     2761 gcgtgctgat ctatttcttc cacgataaac taaactggct gggaaagcta cccggtgaca
     2821 tccgcgttga acgagacaat tttcattttt attttccgat tacgacgatg atagtcgtca
     2881 gcatcatcct taccgtgctg ataaatctct ttagaaaatt tttttgatcg tcttttttct
     2941 gctcccatca aacctatatc tttaaaaaat taaacgactg ctatgcaagc caccgcttct
     3001 caacgctttt tggcgctcga tgtttttcgc ggaatgacca tttgcctgat gatcattgta
     3061 aacacaccgg gtaacgagga aacgaccttt gccccgctta aacacgcgca ctggaacggc
     3121 ttcactccga ccgacctggt gttcccgtcg ttcatgtttg cggttggtaa tgcaatgagt
     3181 tttgtgatga ggcgctggaa cgcgatgaac acaaggcagg tgctcggcaa aattttcaaa
     3241 cgttcgctga tcatctatct cctcggattt ttattgtact ggttcccttt ttttacacac
     3301 aatgaacaac atcggctcat tttatcacct ctttcggaaa ctcgaatatt tggcgtgttg
     3361 caacggatcg cacttgctta ttgcttcaca tcacttcttc tttatttttt aaagacaaga
     3421 gccacggtca tcattaccat catcatcctt attctttatt ggccggtgtt ggtctacttc
     3481 gggactggtc cggatccgct cgatctacat acgaatgcgg tgctgcggtt cgatatgtgg
     3541 cttattggcc caaaacattt atacatgggt gaaggattcc catttgaccc ggaaggattc
     3601 ctaactacat ttccttcgtt ggctaatata gttgccggtt acctggtcgg cttatatgtg
     3661 cagaagaacg gcaaaaattt cgaaggactt gccaagcttc ttatggcggg tttcgctctt
     3721 ctcgtgatcg cgtattggtg gaactacgat tttcccatca ataaaaaatt atggaccagc
     3781 agttttgttt tgcacaccgt tggactggat tgcatgatcc tggcatgcat catgtattac
     3841 accgacttcg ttgggaaacg caagggtgta aacttctttc aggtgttcgg caaaaatcct
     3901 ctgttcattt acttcgtctc ggaactttcg gtcagcattc ttggcatgat acacattaat
     3961 gacaccccct tatttacatg gctgtacgaa aatgtgttta gttatgcggg cgcgtatacg
     4021 ggctccctgt tgtttgcgat ttgcttcatg ttgtactgct ggttggtagg ctattttctt
     4081 gaccgcaaga aaatttatat cagggtttga ttcgacgaca gcaagttatt ttcgttctca
     4141 gaaatttagt aaagactttt ttgtttactt ttagtcgtca gatccttcag catatctctt
     4201 caataaaggt ctcccaagct ctaaagctat tttagcgaac ttgtttattc gtaacacagt
     4261 cgcttttgac cgatgacatt tccgttttgc atttcgaagc aattatcgca taaaaagttt
     4321 tagcctggcc cacaatgccc tgcggcgaaa gctgtagggc ttttttttgt gcacttggta
     4381 aacaataatt tgcaattctc cgtggctcgc tacctttaac gcatgggcaa aaagttgttt
     4441 gtatccatcc tgctggtctc ggacctttta atttcctgct cggataacaa cgcgcaaacc
     4501 gatgccggcc tcgtaaagga caactacata aaaaaggaat tccgaattcc gatgcgagat
     4561 ggcatacggt tatttacatc cgtctatatt ccaaaagatt catctgaaaa atacccgatc
     4621 ttaatggagc gtactccgta ttcggttgag ccttatggcg aagatcatta tccaacggga
     4681 ctcggtccaa accggttttt caaaacagag aaatacattt ttgtttacca ggatgtacgc
     4741 ggacggcaca tgagtgaagg aaatttccag gagatgaccc cggccattga taacaaaaaa
     4801 aataatacgg aggttgatga aagcagcgat acctgggata ccgttgactg gctcctgaag
     4861 aatattcgca acaacaatgg caaggtggga atttacggca tttcttaccc cggattttac
     4921 gcgaccgctt cgctgccgaa tgcacatcct gccataaaag ctgtgtcacc ccaggcgccg
     4981 gttacggatg agttcgaagg cgacgacgtg aatcatcgcg gtgcttttta tttgatggat
     5041 aatttcagtt tcgaaaactt ttttgatgct ccgagggacg gtccacggca ggaaaatcca
     5101 ccggtgaaca gggacattga tataaaagat gtatatgctt tttatttaaa gaccggcgca
     5161 ttgcacaact acaacgatct ctatttccat ggacgcgcga agatttggaa tgaatacctg
     5221 cagcattcaa cgtatgacag ttactggcag gcgaggaata ttcgtccgca cctgaaaaat
     5281 attgaacccg ccacacttga agtgggcgga tggtttgatg cggaagatat gttcggcgcc
     5341 ttaagcacct ataaggcgat tgaacagcaa aacccgaaaa atgacaaccg tttggtaatg
     5401 ggtccatgga cgcatggcgc atgggaagcc ggcaagtggg atcatttcgc aggatatact
     5461 tttggaggtg acctgaacga gaaatttcag caaatagaat ttgatttttt caattattac
     5521 ctcaagggaa aggggccttt caccgccggc gaggcaacga tctttgtcac tggcagcaat
     5581 gagtggagaa cattcaagac gtggccgccc cagggattga caaaaacaaa ttggtggtta
     5641 aatagcggcc accaattgtt gttgcagaaa gcaaaccagt caggttcgga cgaatatgtg
     5701 tctgacccgg ctgatccgat accttatata aacgaaaaaa gcgatgaccg ccttaataaa
     5761 tacttagccg ctgaccaaag attcgcgtct gaacgaaaag atgtggtcta ctatcagagc
     5821 gatatcctgc aaaacaactt cacgctgtta ggccccatca cggcgaactt atatgtaagc
     5881 accagcggaa cggatgcaga ttttgtggtg aaggttatcg acgtcttgcc gggaagcaac
     5941 gtgcagcaac tggtgcgcgc agaggtgatc cggggaaaat tcagaaatag ttttgagaag
     6001 cctgaaccat ttgttcctgg tcagccgacg caaatacatt tgcagttgaa cgacgtggcg
     6061 catacgtttc ttcaggggca ccggatcatg atacaaattc aaagcagttg gtttccgctt
     6121 gtcgacagga accctcagaa gttcatcaac atcccggatg cta
//
LOCUS       DASQJI010000384         9581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1886370,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000384 DASQJI010000000
VERSION     DASQJI010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9581
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886370"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..1693
                     /locus_tag="VEV83_10745"
     CDS             152..1693
                     /locus_tag="VEV83_10745"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HYK45637.1"
                     /translation="MKRMLCFMFLLDGLLVNAQHTYYVNSLDGNDNNSGTSSKRAWRT
                     IDKLNHILFKPGDKILLKAGQTFEGNIFLDSLDSGTVDKPIIVSSYGKGQAIIRAGKS
                     NGIAANDISFVNVSKLYLVGDGVDKNAGSGIHFSSDRTDHVCTRIRIDDCIAEGFHDY
                     GILFSCANDESVTGFDDVRITNCTVLLNGEAGIGSYGGLKSFHHKNFYVGNCKAFLNK
                     GILDKTENHSGNGIVMGDVDNLLIESCEAYANGENNRSKGGGPVGIWMWMCKNGVIQH
                     CESHHNHAGLLTDGGGFDIDGGSSNCIMQYNYSHDNEGAGFLLAEYGADLPFTNNTIR
                     FNISENDGRKNSYGGITVWGVDSLHRVNDCKVYNNTIYMTDSNIVDGVPAAVALFGNN
                     FKHVLIANNIICASRLTTLLRTDSPIDTSIVYFVGNNYCGANWRPPGQAQETFNGLDE
                     RTGTALLFNAGLKGAAKFHPRNADALKKTGVDLKHAFGIETGSKDFFGKDLQGASKLV
                     GAASQ"
     gene            1851..2564
                     /locus_tag="VEV83_10750"
     CDS             1851..2564
                     /locus_tag="VEV83_10750"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK45638.1"
                     /translation="MKKLFLSLAVLLCGAVLFAQDKIVNDPNAEIRNVSSFHAVEVSN
                     GINLILKQGNSDAVAVSASSTDAIKRIKTEVVNGKLKIYFDNEGWHDWGHKNLKAYVT
                     IRNIDELQANSGADATTDGNINANELKISLSSGADFDGTITASKLRVDQSSGSDMDIK
                     GKVQDIEIKTSSGSDFNGYGLVSETCSAHASSGSDIEITVNKELQAEASSGGDISYKG
                     SASITNVSNSSGGKIKKQG"
     gene            complement(2635..2850)
                     /locus_tag="VEV83_10755"
     CDS             complement(2635..2850)
                     /locus_tag="VEV83_10755"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HYK45639.1"
                     /translation="MRVLIGVLSGFVAGVAVGLLVAPTSGDETRQKIADSATDFAGNV
                     KEKFRKFRNRSEAELNDIGVNYETPGQ"
     gene            complement(2931..5654)
                     /locus_tag="VEV83_10760"
     CDS             complement(2931..5654)
                     /locus_tag="VEV83_10760"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HYK45640.1"
                     /translation="MSGFYMQNRYNVFANITRAGVFFCVLIFITFPLLANNRCKIKFP
                     KFLTVNDTIPAREIDSFPAQKIIADTLSPADSLRDLSDTSIVDSGRQVAVDTLLFSKD
                     SLDAPVTYSAEDSGVLIIPQKQFILYGKANTTYKDIKLDANTIEYNQSTNVVTAYGGT
                     DTASKDPLNLPTFTQAGSESKMDTVKFNLKNQKGITKNTYYKEGELFVNAQIVKKVNK
                     DVEYAYRGRFTTCNLDTPHFDFRAKKMKIINNKIAVSGPAYPEFEGVPMPIAIPFGIY
                     PLNRGRHSGLLPPRFTSNESFGLGLEGLGFYKVISDYWDVTLRSSIYSYGGWNVDITP
                     EYYKRYKYRGNFTLSAQHTKLLNTSGLSKQEFTVSNTYFLTWSHSSDTKARPGTSFSA
                     NVRAGSTQYNTYVPNDAFRNYENNLSSSITYNKIWNQGKYNLNASLNENQNSVTRLIN
                     LNFPTIAFSATTMYPFQKKEQVGSPKWYQKLGIGYTGNLLNVISFYDSAFNIQRILDT
                     VQWGVDHRIPITLALPPIGPLILAPSISYEERWYAQLINYTWNPHLAKVDTSIEKGFH
                     TAREMTFGVSANTRIFGTFNFKHSKGIQAIRHEIDPFFGFSYKPDLVSQYFSNVQVDT
                     LGHVVRISQLQGNVLGGFSEGKFGGINFGLNNLLEMKVRNKKDTTGTDSVKKIRLLDN
                     LSITSGYNLIADSLNWSPISIRAGSSLFNKVNISAGATINQYEKDSSGKSHLLWKQGR
                     IGNFQSGSLSMSTSFQSKSKDNRSDEERLPTDETMTPDEQQRQLEYVRENPAEFVDFN
                     IPWSLQLSFSLNYSHYLSPDLVNYVSDLNSNVNINGDISISPKWKLGGGLYFDFKTQK
                     IQATSIYLTRDMHCWQMVIDVNVGQYKSFSITLNPKSGILRDLRVNKRFLE"
     gene            5711..6667
                     /locus_tag="VEV83_10765"
     CDS             5711..6667
                     /locus_tag="VEV83_10765"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HYK45641.1"
                     /translation="MLKKISVAFSVFATILICTSFRVAPPSSHDQIAAQGQNTLRTIV
                     IDAGHGGKDFGAAGAYSYEKNVTLAIALKLQSTLQAALPDVNIVMTRTTDIFDAPPVK
                     ANKANAAKGDLFLCIHCNAAPKIRHSELTGYKTQTYYTGKGSKRRKHTKKVPTYNVWY
                     TPNPAKGTETYIWAAHKNDDKELAMRENESLYIDSTMAEQFEGFDPDSPEKRMYYSLK
                     TQQYFQRSANLALDVEQEFTKVGRISREARQRQVGIWVLQATAMPSILVETGYITNPE
                     EEDYLNSVDGQQEICNAITQAVAHYKTALETNSFRNIVENTQ"
     gene            6862..7866
                     /locus_tag="VEV83_10770"
     CDS             6862..7866
                     /locus_tag="VEV83_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HYK45642.1"
                     /translation="MKISNETKIGALTTIAVVFLILGFNFLKGKSVLKTGFFLYAKYA
                     DLKKLSSSNAVYANGFQIGTVYSTTSADPSLKDLVVEIKLKEEYNIPENSLASIETNP
                     LGAPVLNIALGSSTKFLQSGDTIRSVENAGMLGALSSKLGPLSDQITLTLITLDSLMR
                     NFNSVLDPNTKGNLRSVIENLSKATASIVTSSASLQDLLNTQSGALAQSLGHVNTFTA
                     SLAANTSKIDSTLSYLQTTTKNLSQADVSGLIGKFRESADSLSAIINSIKSTNGSLGA
                     LINDRALYNNLNNLSRSLNILIDDLRAHPKRYVNVSVFGKKDNGDYLTEPLADSATKK
                     "
     gene            7866..9500
                     /locus_tag="VEV83_10775"
     CDS             7866..9500
                     /locus_tag="VEV83_10775"
                     /inference="COORDINATES: protein motif:HMM:NF024500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OstA-like protein"
                     /protein_id="HYK45643.1"
                     /translation="MIGYKAIFFSFSFCFCLLNFSLQAQQPGADSSAKKQIIILNAER
                     LNYEKKDSAEYQSAAGKVAIQQQTTLFYCDSVALNKTRNLLEAYGHVHINDNDSVHTY
                     SDYLRYLGNEKKAYLNGHVKLTDGKGTLTTPDLDYDLNTHIGIYTKGGKVVSEKTVLT
                     SQEGYYYGETKDVYFKKQVVLNNPDYTVTTDTLLFNTYTNVATFVVPTLVKANKKRTI
                     LTSDGYYDMKNKKAYFGKRPHIEDSTTILDADQVASDDSTQQSEASGNVIYKDTAQGV
                     TILSNNLKSNGEQASYLATQRPIMIIKQDQDSIYMAADTFFSARLSNLRKYRNVPVIL
                     DSLPAADSIRIRDSATAKPDSARDRFVEAYFHVKIFSDSLQAVGDSLFYSLEDSAFRL
                     FKEPAVWSRESQITGDTIYLFTQDKKAKRIYVFENALSIQKVGPDYYNQVKGRTINGY
                     FVGGEIEHVRAKGNGESIYYGQDDSSKFIGVNRATADVIDMYFANREAQRVVFRSNLE
                     GTSFPMRQMNSADMRLRGFVWLDDRRPKTKYDLFGN"
BASE COUNT         2748 a         2094 c         2201 g         2538 t
ORIGIN      
        1 tgctgctgtt tcagccaatc gatcgctgaa ggctgccatg cacataggtt agtgccgaga
       61 agcacaacat atattaactt cataattccc ctttaaactg aatcgtcaag ttaacgcaaa
      121 tggttaacag tatctacggt atgtttgatc tatgaaacga atgctctgtt ttatgtttct
      181 cctcgatggg ctgctggtta acgcacaaca tacttactat gtaaatagcc tggacggaaa
      241 tgataacaac agcggcacat catcaaaaag agcatggcga accatcgata aattaaatca
      301 tatccttttc aaaccgggcg acaagatctt attaaaggca gggcaaacgt ttgaagggaa
      361 tatttttctg gacagtcttg acagcggcac tgtggataaa cccataattg ttagctccta
      421 tggaaagggg caggcgatca ttagagcagg caaaagcaat ggcattgcag caaacgatat
      481 ttcgtttgta aatgtctcca aactttattt ggtcggtgat ggtgttgaca aaaatgcggg
      541 cagcggaata catttttctt cggacagaac agatcacgta tgcacgagaa tccggatcga
      601 tgactgcatc gccgaaggct ttcatgatta tggaattctg ttcagttgtg cgaatgacga
      661 gtctgttacg ggctttgatg atgtaaggat aacaaactgc accgtcctgc tgaacggcga
      721 agccggcatc ggttcttatg gcggtttgaa atcgtttcat cacaaaaact tttatgtagg
      781 caattgcaaa gcatttctga ataaaggcat ccttgacaaa acggaaaacc attccggcaa
      841 cgggatcgta atgggcgacg ttgacaattt actgatcgaa agctgcgaag cttacgccaa
      901 cggtgaaaat aatcgcagca aaggaggcgg ccccgtcggc atttggatgt ggatgtgcaa
      961 aaacggggtg atccagcatt gtgaatcaca tcataatcat gcgggacttt tgacagacgg
     1021 tggaggattt gatatcgatg gcggaagttc caattgtatc atgcaataca attattctca
     1081 cgataatgaa ggtgcaggat ttctgctggc cgagtatgga gccgatctgc catttacgaa
     1141 caatacgata cgcttcaaca taagcgaaaa cgacggacga aaaaatagct atggcggcat
     1201 tactgtttgg ggcgtcgata gcctgcaccg ggtgaacgat tgcaaggtgt acaacaacac
     1261 catttatatg accgacagta atattgttga tggtgtacct gctgcggtgg cattattcgg
     1321 aaataatttc aaacatgtcc tgatcgccaa caatattatc tgtgcttcgc ggctgacgac
     1381 cttgttacgc accgatagcc ctatcgatac cagtatcgtc tactttgtcg gcaataatta
     1441 ttgcggcgca aactggagac cacccggcca ggcgcaggaa acattcaatg gcctcgatga
     1501 gcgaaccggg actgcactgc tgtttaatgc tggcctaaag ggagccgcaa aatttcaccc
     1561 acgaaacgct gacgctctta aaaaaactgg cgtcgaccta aaacatgcat ttggaattga
     1621 aactggttcg aaagactttt ttggaaaaga tcttcaaggt gcgtcaaaac tggtgggagc
     1681 tgcttctcaa taatgcccgg cttttaagat gccaggaact aggagctgcc gcccatcagc
     1741 aaaaaattct tcttatcatt cgttttgcac aatctctaaa acaacatcaa ataaaagtcc
     1801 ggtatttgta actttttagc cttgtcagcg taccataaaa aaactgaaca atgaaaaaat
     1861 tatttctctc tctcgcggtg ttgttgtgcg gtgcagttct ttttgcacag gataagatcg
     1921 ttaatgatcc caacgcagaa ataagaaacg tcagcagctt tcatgctgtt gaggtgtcaa
     1981 acggcatcaa tcttattctt aaacagggca attcggatgc cgtagcggta agcgcttctt
     2041 caaccgatgc tataaagcga atcaaaacag aagttgtgaa cggaaagctg aagatctatt
     2101 ttgacaatga aggctggcac gactggggcc acaagaattt gaaagcatac gttacgatca
     2161 ggaacattga tgaactgcaa gcaaactcag gagcagatgc aaccaccgat ggcaacatca
     2221 acgcgaacga attaaagatc agcctgtctt ccggcgctga tttcgacgga accataactg
     2281 catcaaaact acgggtagat caaagcagtg gcagcgatat ggatattaaa ggaaaggtgc
     2341 aggacattga gatcaaaaca agtagtggtt cagacttcaa tgggtatggc cttgtttctg
     2401 aaacatgttc agcgcatgcc agcagtggaa gcgatataga gatcacagtg aataaggaac
     2461 tgcaagccga ggcgagcagt ggaggagata tcagttataa gggaagcgcc tcgatcacca
     2521 atgtctcgaa cagcagcgga ggcaagatca agaagcaggg ttaagctgat caagaacgtt
     2581 agcaaataaa aaggagctcc aggcggaact ccttttttgc atataagccg tttactactg
     2641 tccgggagtt tcgtagttta cgccgatatc gttcaattct gcctcgctcc tgttgcggaa
     2701 tttgcggaat ttttctttta catttcctgc aaagtcggta gcagaatctg cgatcttttg
     2761 acgggtttca tcgccacttg tcggggcaac gagcaaacca acggcaacac cggctacgaa
     2821 gcctgagagt actccaatca atacacgcat aacaaaataa ttttagtgaa ttaatataac
     2881 ttttttccca acaaccttgc cagattcaat tttgtcagag gttaaagttg ctattccagg
     2941 aaacgcttat taacgcgaag atctctcagt atgcctgact tcggattgag tgtaatgctg
     3001 aacgatttgt attgacccac attcacgtcg atcaccattt gccagcaatg catgtcacgg
     3061 gtaaggtaaa tgctcgttgc ctgtattttt tgagttttaa agtcaaaata taagccgcct
     3121 ccgagcttcc atttgggtga aatactaata tcgccgttga tgtttacgtt agaattgaga
     3181 tctgaaacat aattaactaa gtctggtgac aaataatgac tgtagttgag tgaaaacgac
     3241 agttgcagag accatggaat attgaagtct acaaattccg cagggttctc ccgcacgtat
     3301 tccagttgcc tttgctgctc atctggcgtc atggtctcat cagtgggtaa ccgttcctca
     3361 tcagaccggt tgtctttgga cttactttga aatgaggtag acatcgacaa actccccgat
     3421 tgaaaattgc cgatccggcc ctgcttccac agcaaatgac ttttaccgct gctgtctttt
     3481 tcatattggt tgatcgtggc gcctgcagaa atatttacct tattgaaaag gctgctcccg
     3541 gccctgatgc ttatcgggct ccagttgaga ctgtcggcga tcaggttata accgctggtg
     3601 atgcttaaat tgtcgagcag ccttatcttt tttacgctat ccgtcccggt ggtatctttc
     3661 ttgtttctaa ccttcatctc cagcaaatta ttaagcccga agtttatccc tccaaacttc
     3721 ccctcgctga aacctccgag aacgttgccc tggagttgtg agatcctcac aacatgcccc
     3781 agcgtatcta cttgcacatt actgaaatac tggctcacca aatctggctt atagctaaat
     3841 ccaaaaaacg gatctatctc gtgccggata gcctgtatcc cctttgagtg tttaaaatta
     3901 aacgttccga aaatgcgcgt gttagcgctt accccaaacg tcatctcacg ggcggtatga
     3961 aaaccttttt ctatgctcgt atcaactttc gccaggtgcg ggttccaggt ataattgatc
     4021 agctgcgcat accatctttc ttcgtaactg atcgaaggtg caaggatcag cggcccaatc
     4081 ggtggcagtg ccagtgttat cggaatacga tggtcaacgc cccattgcac ggtgtcgagt
     4141 attctttgaa tattaaaggc ggagtcataa aaagaaatta cgttaagcag gttcccggta
     4201 taaccaatgc ccagcttttg ataccacttc ggcgaaccaa cctgctcttt tttctgaaaa
     4261 ggatacatgg tcgttgctga aaatgcgatc gtggggaaat tcaggttaat gagccgggtg
     4321 acgctgttct ggttttcgtt cagagaagca ttcaaattgt atttgccctg gttccagatc
     4381 ttgttgtacg tgatcgacga gcttaaatta ttttcataat tgcggaacgc atcattggga
     4441 acataggtgt tgtactgcgt actaccggct cttacgtttg ccgagaaact ggtgccggga
     4501 cgagctttag tgtcagatga gtggctccag gtaaggaagt aggtattact caccgtaaat
     4561 tcctgcttgg aaaggccgga tgtatttaaa agtttggtgt gctgcgcact caacgtaaaa
     4621 tttcccctgt acttatatcg cttataatat tctggtgtaa tgtcaacatt ccatcctcca
     4681 taagagtata tactactgcg gagcgtcaca tcccagtagt cgctgatcac tttgtaaaat
     4741 ccaaggcctt cgagcccgag cccaaagctt tcgtttgaag taaagcgagg tggcaacaag
     4801 cccgaatgcc ttccacggtt caacgggtaa attccaaacg gtatcgcgat cggcattggc
     4861 acaccttcaa actccggata agcgggcccg gacactgcga tcttgttatt gatgatcttc
     4921 atttttttcg ccctgaaatc gaagtgcggt gtatcgaggt tgcaggtggt aaatcgtccg
     4981 cgataggcat attcaacatc tttgttcacc ttcttcacga tctgtgcatt tacaaaaagc
     5041 tcaccctcct tgtagtaagt gttctttgtg atgccctttt gattcttgag gttaaacttc
     5101 accgtatcca ttttcgattc tgagccggcc tgggtgaacg ttggcaggtt aagcggatct
     5161 ttcgaagctg tatccgtgcc tccatacgcg gtaaccacat tggtactttg attgtactca
     5221 atggtgtttg catcgagttt aatatcctta tatgttgtat ttgctttgcc gtaaaggatg
     5281 aattgttttt gaggaatgat gagcaccccg ctgtcttcag cggaatatgt taccggtgca
     5341 tcaagggaat cctttgagaa aagtaaagta tccactgcaa cctgcctgcc ggaatcaact
     5401 attgaagtgt cgctcagatc gcggagcgaa tcagcagggc ttaacgtatc agcaataatt
     5461 ttttgggcag gaaaagaatc tatttccctg gctggaattg tatcgttaac tgttaagaat
     5521 tttggaaatt taattttgca ccgattgtta gcaagtaatg gaaacgttat aaaaatcagg
     5581 acgcaaaaaa aaactcctgc acgggttata tttgcgaaaa cattataccg gttctgcata
     5641 tagaagccag acaaatgtag agtttaatag cataatagat ttgtaaagga aagtttttaa
     5701 cgaagtagac atgcttaaga aaatttcggt tgctttcagc gtttttgcca cgatcttaat
     5761 ctgtacttct tttcgcgttg ctccgccatc atctcatgat caaattgctg cgcaaggtca
     5821 aaatacgtta aggacaattg tgatcgatgc cggccacgga ggcaaagatt ttggtgctgc
     5881 aggcgcatat tcatacgaaa aaaatgttac gctcgccatc gccttaaaac tgcaaagcac
     5941 attacaggca gcgttgcccg atgtaaacat agtgatgaca cgtaccactg atattttcga
     6001 tgccccaccg gtgaaagcaa acaaagcaaa tgctgcgaaa ggagatctgt ttttgtgcat
     6061 tcattgcaac gcggcgccaa agatcaggca cagcgaactc acaggttata aaactcaaac
     6121 ttactatacc ggtaaaggga gcaagagaag aaagcataca aagaaggttc cgacttataa
     6181 tgtgtggtac acaccaaatc ctgccaaggg aacggaaaca tatatctggg ctgcacacaa
     6241 gaatgatgat aaagagctgg cgatgcgcga aaatgagtct ttatacatcg acagcacaat
     6301 ggccgaacaa tttgagggat tcgacccgga cagccccgaa aaaagaatgt actactcgct
     6361 aaaaacgcag caatattttc aacgtagcgc taatctcgcc ctcgatgttg agcaggagtt
     6421 tacaaaggtg ggccgcataa gccgggaagc gaggcagcgc caggttggca tatgggtatt
     6481 acaggcaacc gcgatgccta gtatactcgt tgaaacaggt tatatcacca atcccgaaga
     6541 agaagattac ctgaacagcg tggacggtca gcaggagatc tgtaacgcga tcacgcaggc
     6601 cgttgcacac tataaaactg ctcttgagac aaattctttc cgcaatattg ttgagaatac
     6661 ccagtaaccg ccttgaattc atttgttcag taatgaatat cttttagttt tgcgcacgtg
     6721 cgattggccc tgcggctgtg ttgttagtga ggccgcttaa cgcgcgggga acgtggaaat
     6781 cgtgttccaa aacaatgcat gaataaataa tttagtgttg tatgcattgc atgtggcctt
     6841 tgaaaaaaca aatctcaaca catgaaaatt tcaaacgaaa ccaaaattgg ggcgttaact
     6901 acgatagcgg ttgttttctt aattcttgga tttaattttc tcaaaggcaa aagcgtctta
     6961 aagacgggtt ttttcctgta tgcaaaatac gctgatctta aaaagctttc ttcctcgaac
     7021 gcagtgtatg cgaacggttt tcaaattggc accgtctaca gtacaacttc cgctgatcct
     7081 tctctgaaag atcttgttgt tgagatcaaa ctaaaggagg agtacaatat ccccgaaaat
     7141 tctctcgcat ctatagagac gaatccttta ggcgcaccgg ttctcaacat agcattgggc
     7201 agtagcacaa aatttttgca atccggcgat acgatccgca gcgtggaaaa tgccggtatg
     7261 cttggtgcac tgtcgagcaa attaggcccc ttgtctgatc aaattacctt aacactcatt
     7321 acgcttgatt cgctcatgcg caatttcaac agtgtgcttg atcccaacac gaagggcaat
     7381 ttgcgcagcg tgatcgaaaa cctcagcaag gcaacagcaa gcatcgttac atcttcagct
     7441 tctttgcaag acttgctgaa cacccagtcg ggtgcactgg ctcagtcgct cgggcacgtg
     7501 aacactttca cagcgagcct cgcagcgaac acgagcaaaa tagacagcac actttcatat
     7561 cttcaaacca cgacaaagaa tttatcgcag gctgatgtaa gcggtttaat aggcaagttc
     7621 agggaaagcg cagattcttt atcggcgatc atcaacagca ttaagtcaac aaatggctcg
     7681 ctcggtgcac tcattaacga cagggcatta tacaataacc ttaacaacct ctcccgcagt
     7741 ctgaatattt tgattgatga ccttcgtgct catccgaagc gctatgttaa cgtctctgtt
     7801 ttcggaaaaa aggacaacgg agattattta accgagccgc tcgcggattc ggcaacaaaa
     7861 aaataatgat agggtataag gcgatatttt tttctttttc cttttgcttt tgtcttttga
     7921 atttctcctt gcaggcgcaa cagcccggcg ccgatagttc ggcgaaaaag cagatcatta
     7981 ttcttaacgc agaacggctg aattacgaaa agaaggactc cgccgaatac cagtcagccg
     8041 ccggaaaagt tgctattcaa cagcagacca cattgtttta ttgcgatagc gttgcgctga
     8101 acaaaacgag gaatctgctc gaagcatatg ggcacgttca catcaacgac aacgatagtg
     8161 ttcatacata ttctgactat ctccgctatc tcggtaatga aaaaaaagca tatctgaatg
     8221 gtcatgtgaa gctgaccgac ggcaaaggaa cattgacgac acctgatctt gattacgatc
     8281 tcaacacaca cataggcatc tataccaagg gaggaaaagt ggtgagcgaa aaaaccgttc
     8341 tcacaagcca ggaaggttat tattacggtg agacgaaaga cgtttatttc aaaaaacagg
     8401 ttgtgctaaa caacccggat tacacagtaa ctactgacac cttgttgttt aatacctata
     8461 caaatgttgc aacgttcgtt gtgcccacgc tcgtcaaggc gaacaagaaa agaacgatat
     8521 taacgagtga tggttattac gacatgaaga acaagaaggc ttactttggt aagcggcctc
     8581 acatagaaga cagtactaca atactcgacg cagatcaagt cgcttctgat gactcgacgc
     8641 agcaaagcga ggccagcggc aacgtgatat acaaagacac cgcgcaaggc gtcaccattc
     8701 tttccaataa tttaaaaagt aacggtgagc aggcatccta tctggcgacg cagcggccta
     8761 ttatgatcat caaacaggac caggattcta tttacatggc tgcagatact tttttttctg
     8821 cgagattatc caatctcaga aaataccgta atgtgccggt catactcgat tcgctgcccg
     8881 ccgctgattc gatcaggatc cgcgactccg ccaccgcaaa accggatagt gcaagggacc
     8941 ggttcgtaga agcatacttt cacgtaaaga tattttcgga ttctttgcag gcggtgggtg
     9001 atagtttgtt ttattcattg gaggattctg catttcggct gttcaaggaa ccggcggtgt
     9061 ggagcaggga aagccagata accggtgata cgatctatct ttttacgcag gacaaaaaag
     9121 caaagcgcat atatgttttt gaaaatgcgc tgagcattca gaaagtagga cctgattatt
     9181 acaaccaggt gaagggcaga acgatcaacg gctattttgt cggtggcgag atcgagcatg
     9241 tgcgggcgaa gggcaatgga gaaagtattt attatgggca ggacgatagc agcaaattca
     9301 tcggcgttaa tcgtgcgaca gccgatgtga tagatatgta ttttgcaaac cgcgaagcgc
     9361 agcgtgttgt atttcgcagt aacctggagg gtacgagttt cccaatgcgg cagatgaatt
     9421 ctgcagatat gcgtctacgc ggatttgttt ggctcgatga ccgcaggccg aagacgaagt
     9481 atgatttgtt tggaaattga aatttgttct tttggggctg tcatcatttt cgcatcattc
     9541 agcgacagtt cccgcttttc gctacaactc ctcgcccgga a
//
LOCUS       DASQJI010000385         1992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1426345,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000385 DASQJI010000000
VERSION     DASQJI010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1426345"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VEV83_10780"
     CDS             <1..646
                     /locus_tag="VEV83_10780"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HYK45644.1"
                     /translation="RASFDNKYAVEVFRFLQTIYTNGYFSRENLSAANDPFVTQQIAT
                     QFTGPWQTSYLLSIPSRNFDFGYFQPPVPDDHAGPVYTYADPKNIVVFNTCKHPQQAW
                     DFIKTLVDKDADLQLLTITNELPNRKNLDTDSFYADFFKKNPMLLPFAKQVAFVKGID
                     NCDVIVEVLDIISQEYTACVIYGRKTPEQAIKDAAAAVNVLLENSAADAKNKLH"
     gene            699..1817
                     /locus_tag="VEV83_10785"
     CDS             699..1817
                     /locus_tag="VEV83_10785"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45645.1"
                     /translation="MPERNLNIGIVGAGSFADFAAKAFLKVEGVRIVAVADINEKIAA
                     QLASSFNAKPYADYEVFLNDRNIDLVYIATPPFLHYQQSKAALLAGKHVICEKPAALK
                     ASEARELAALADSRQLLYVVNLMQRYNPLYSIVNTIINEKILGGFLHGFFENYASDES
                     LDSNHWFWDESKSGGIFIEHGVHFFDMFSGWLGEGKVISAFQIQRPSVTQKINDRVQA
                     TVLYHDGLVNFYHGFDQPKILDRQEMRLQFEHGDITLYGWIPVKVRLHGLFQKQSLEK
                     VCELLSGCAIQDCNETNEQPQTVRGRFSNIPFDEHVTIEYGSISEKHGRYQQVLIAMI
                     SDQWMWIKDKSHQRIIDQTNAVQSLKTAEEATVLAQQF"
BASE COUNT          607 a          426 c          437 g          522 t
ORIGIN      
        1 cagggcctcg tttgacaaca aatatgccgt tgaggttttt cgatttttgc agacgatata
       61 tacgaatggc tatttcagcc gggaaaattt atccgcggcc aacgatcctt ttgttacaca
      121 gcaaatcgcc acgcagttca cggggccatg gcaaaccagc tatttattaa gcatacccag
      181 caggaatttt gatttcggtt attttcagcc gccagttccc gatgaccacg ctggccctgt
      241 gtatacatac gccgatccga aaaacattgt cgtctttaac acctgcaaac atccgcaaca
      301 agcatgggat tttattaaaa cacttgttga caaagatgcc gacctgcaat tgctgacgat
      361 cactaatgaa ttaccgaaca gaaaaaacct ggatacagac agcttttacg ctgacttttt
      421 caaaaaaaat ccgatgctat tgccttttgc caaacaagtg gctttcgtaa aaggaattga
      481 taattgtgat gtgatcgtcg aagtgctcga tatcatctcg caggaataca ctgcctgcgt
      541 gatctatgga agaaaaacgc ccgagcaggc gataaaagac gcagcagccg ccgtaaatgt
      601 actgctcgaa aatagcgccg cggatgctaa aaataaattg cattgaaatt aggctgagaa
      661 aaaaactata gctgaaagcg taaaaaaaaa ttgatcaatt gcctgaacgg aatttaaata
      721 tcggaattgt aggagcgggc tcgttcgccg attttgcggc aaaagcattc ttaaaagttg
      781 aaggtgtacg aatcgttgcg gtagccgaca ttaatgaaaa aatcgcagcc caactagctt
      841 cttccttcaa cgcaaaaccg tatgctgatt acgaagtttt tttgaatgat cgcaatatcg
      901 atttggttta tattgccaca ccgccttttc tccattacca acaatcgaag gccgcattgc
      961 tcgcaggcaa acatgtgatc tgtgagaaac ctgccgcgtt aaaggctagt gaagcaaggg
     1021 aattggcagc gcttgccgat tctcgccagc tactgtacgt ggtcaatctc atgcagcgct
     1081 ataatcctct ttattcaatt gtaaacacga tcataaacga aaaaatactg ggcggttttc
     1141 tgcatggatt ttttgaaaat tatgccagcg atgaaagcct cgacagcaat cattggtttt
     1201 gggacgagtc aaagagcggc ggcatcttca ttgaacacgg cgttcatttc tttgacatgt
     1261 tctctgggtg gctgggtgaa ggaaaagtga tcagtgcttt tcaaatacaa cgtccttccg
     1321 ttacacaaaa aattaatgac cgcgttcagg caacagtgct ttaccatgat ggtctcgtga
     1381 atttttatca cggctttgat cagccaaaaa tattagacag gcaggagatg cggcttcagt
     1441 ttgagcacgg cgatataacg ctttacggat ggataccggt taaagtgaga ctgcacggac
     1501 tatttcaaaa gcaatcattg gaaaaggttt gtgagctgct aagcggttgc gcaattcaag
     1561 attgcaacga aacgaatgag cagccacaaa ctgtaagagg acgattctca aatataccat
     1621 tcgacgagca cgtgacgatt gaatacggaa gcatttccga aaagcatggc cgttatcagc
     1681 aagtgcttat cgccatgatc tccgaccagt ggatgtggat caaagataaa agtcatcagc
     1741 gcattattga tcaaacgaac gcagtgcaat cactcaaaac agcggaagag gcaacagtac
     1801 tggcacaaca attttaattg aatggatcca gcgatcacaa tacaaacaaa acaacggaag
     1861 aaatctttgg tcaagcgcaa gaagctaacg ccgtatgtaa tggtgtcgcc atatcttctg
     1921 ttcctgctgg tattcgtatt atttcccgtg ttgttttgtc tctttctcac ttttaataga
     1981 tggaatatca tt
//
LOCUS       DASQJI010000386         2003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_350629,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000386 DASQJI010000000
VERSION     DASQJI010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350629"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1658)
                     /locus_tag="VEV83_10790"
     CDS             complement(<1..1658)
                     /locus_tag="VEV83_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK45646.1"
                     /translation="MADNVYDAIVVGSGISGGWAAKELSEKGLKVIMLERGMDIKHVK
                     DYVNTSKNPWEFPHRGRRTQKMVQDFPVLRRDYPLNEMNVEWWANDKESPYTEIKRFD
                     WFRGYHVGGRSLLWGRQSYRWSDFDFEANAKEGIAVDWPVRYKEIEPWYDYVEKFAGI
                     SGNRDGLSQLPDGQFMPPMDMTCVEKDVAARIKEHYKGSRSMIIGRTANITQPIQERT
                     NCQFRNKCWLGCPFGGYFSTQSSTLPAAMKTGNLTVRPWAIVTKVLYNKDSKRATGVE
                     VLDAQDNKTYEYKAKVVFLNASTLNSAWILLNSATDVWPDGLGSSSGELGHNLMDHHL
                     GVGASGLVDGYEDKYYYGRRPNGVYIPRYRNLFGDKRDYLRGFGYQGGGSRQGWDREI
                     AELQIGVGYKEALTEPGNWTMGVGGFGEMLPDHNNKVTLDKNTKDKWGLNVLAIDCEL
                     RENELKMRKDMFNDAIEMLTIAGVKNVRGHDGDGTPGRGIHEMGTARMGADPKTSVLN
                     KWNQVWDAPNVFVTDGAFMTSSNDVNPSLTYMAFTARAADHAVS"
     gene            complement(1765..>2003)
                     /locus_tag="VEV83_10795"
     CDS             complement(1765..>2003)
                     /locus_tag="VEV83_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HYK45647.1"
                     /translation="DEGDVIRTINDNHQYFGHYHTGGVPGRHEIDESQELFYPAIMKA
                     IVATGFKGYVAQEFIPAAKDKAASLKKAVEICDV"
BASE COUNT          477 a          526 c          392 g          608 t
ORIGIN      
        1 tcactcacgg cgtgatcggc agcgcgtgct gtaaacgcca tgtacgtgag tgatggattt
       61 acatcgtttg aacttgtcat gaatgcccca tcggttacga aaacgtttgg cgcatcccac
      121 acctggttcc atttattgag caccgatgtt ttcggatctg cgcccatgcg tgccgtaccc
      181 atttcatgaa tgccacggcc gggagtacca tcaccatcat ggccccgcac attttttact
      241 cctgcaatgg tgagcatttc tatcgcatca ttgaacatat ccttgcgcat tttcagctca
      301 ttttctctta gttcgcaatc gatagcaagg acattcaacc cccatttatc ttttgtgttt
      361 ttatcgagtg tgactttgtt attatgatca ggcaacattt caccgaaacc gcccacgccc
      421 attgtccagt tacccggttc agttaaagcc tccttataac ctacgccaat ttgtagttct
      481 gcaatttcac ggtcccatcc ctgccggctg ccaccgccct ggtaaccaaa gccgcgcaaa
      541 taatcacgtt tatcgccgaa caaatttcta tatcgcggaa tgtatactcc atttggccga
      601 cgcccatagt aatatttatc ttcatagccg tcaactaaac ctgatgctcc aactcctaaa
      661 tggtggtcca tcaaattgtg gccaagttca ccgctgctgc tgcccagtcc atcaggccaa
      721 acatcggtgg ctgagtttaa taagatccat gcgctgttta gagtagaagc attcaggaat
      781 acaactttcg ctttgtattc ataagtttta ttatcctgcg catcgagcac ttcaacaccg
      841 gtggctcttt tgctatcctt gttatagaga accttcgtca caattgccca cggcctcact
      901 gtcaggtttc ctgtcttcat cgctgcgggt aacgtggacg attgcgtgct aaagtatccg
      961 ccgaatgggc agccaagcca gcacttattt ctgaactggc aatttgttct ctcctgtata
     1021 ggttgggtga tattggccgt tctccctatg atcatcgaac ggctgccttt gtaatgttct
     1081 ttgatgcgcg cagctacgtc tttttcaacg catgtcatgt ccattggtgg cataaactgt
     1141 ccgtcgggta attgagaaag tccatcgcgg ttgccgctga tacccgcaaa tttttcaacg
     1201 taatcatacc atggctcgat ttccttgtac cgaacaggcc agtcaacggc gattccctct
     1261 ttagcatttg cctcgaaatc gaagtcgctc caccggtagc tttggcggcc ccacaataaa
     1321 gatctgcctc caacatgata accgcggaac cagtcgaatc gttttatttc cgtgtatggc
     1381 gattccttgt cattcgccca ccactcaacg ttcatttcgt tcagcgggta gtcgcgcctg
     1441 agcaccggaa aatcctgaac cattttttgc gttctgcggc cgcgatgagg gaactcccat
     1501 ggatttttgc tggtgtttac atagtctttc acatgtttaa tgtccattcc tctttcgagc
     1561 atgatcacct tcaaaccttt ttcagaaagt tcttttgcag cccagccacc actaatgccc
     1621 gagcccacca cgatcgcatc ataaacattg tcagccatta tatttagttt aattgtttcg
     1681 aagaaaatta aaaattaaaa agtcaaaatt taaaatggca ggatatccat ttttgacttt
     1741 ttagttttga cttttgactt aagatcacac atcacaaatt tcaaccgctt tcttaagcga
     1801 tgcagcctta tcttttgcgg cgggaataaa ttcctgggct acataacctt taaaaccagt
     1861 tgctactatt gctttcatta tggcaggata gaataattcc tgcgattcat ctatttcatg
     1921 cctgcccggt acgccgcctg tatggtaatg gccaaaatac tggtgattat cattaatggt
     1981 ccttatcaca tcaccttcat cga
//
LOCUS       DASQJI010000387         3449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_43936,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000387 DASQJI010000000
VERSION     DASQJI010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43936"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..2152)
                     /locus_tag="VEV83_10800"
     CDS             complement(149..2152)
                     /locus_tag="VEV83_10800"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK45648.1"
                     /translation="MSQFRQLSAIVFTDIEGYTAIMRQDEEKAILIRNRHREILEREH
                     KQFNGRIIQYYGDGALSVFQSVVDAVQCALAMQQTFCQPPRVPVRMGVHVGDIIHHDE
                     DIVGDGVNVASRIESLGVAGSVLISDKVNDEISNHREFKTYSVGIYQFKNVDRKIEVF
                     ALDHEKLVKPVPGTLTGKTESNTDPFSLKPERPMKDSNTKKKYPMYNAGKSIAVLPFV
                     NMSNDSEQEYFSDGMAEEIINSLVHIRDLKVVGRMSSFQFKGANVDVRDVGEKLRVST
                     VLEGSVRKQGNRVRVTAQLINVRNGFHLWSEKYDRTMDDIFAIQEEIAVAITEELKVT
                     LLEKERMRINKAPSQKQEAYELYLKGRFYWMQRGLGLKKCIMYFQQAVELDPNFALAY
                     AGLADAYAFLGFYAMMAPSECGPRAKEAALKAAEIDDSLAEVHTTLAFLSSFYDWNWE
                     KARHHFKKALEINFNHAPAHYWYSLFLSTVDRDHQHAIKEGTKALELEPLTAVQYSLM
                     AVVYLGAGRFEDAVKACEMGALLDDKSFLSYRYLGLSLALLKRYDEAIDALKRAAILS
                     IRHQWPLSDLCWIYSVIGDLDEAQKIYNELLLRSQTEYISGFFLSCAAYSLKFHDKAF
                     EYLEKAHEQRDGLLLVARTWPAAQQMKSDPRFDAFVQKMNFPE"
     gene            complement(2803..2931)
                     /locus_tag="VEV83_10805"
     CDS             complement(2803..2931)
                     /locus_tag="VEV83_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45649.1"
                     /translation="MKFLFGDSAYEKIILLKKTVHKIIKLIAGRDDDQLGNSCLIL"
     gene            3063..3422
                     /locus_tag="VEV83_10810"
     CDS             3063..3422
                     /locus_tag="VEV83_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45650.1"
                     /translation="MLQHFVITNCGIEYVIRSIMDTRFYIAFSFKIDDDYQPFAKFFL
                     GNNREIADTIFKSLKGSDDVNEMNVLYMDFVETWEGLPKNLKVKSCTLPELAENCSII
                     TRELFKFANLEGYMPLP"
BASE COUNT          935 a          797 c          723 g          994 t
ORIGIN      
        1 gctaaccctc cacctttagg gggagttgga gggggccagc cccttgagcg atggattgaa
       61 atcagatcct gatggacttc gtgaatcgaa cattatccct taaaaatttg gaattgtgcc
      121 atgcaacctc tgctgcgcta aaagttagct attcagggaa attcattttt tgtacgaaag
      181 cgtcaaaccg cggatcgctt ttcatctgct gtgcggccgg ccaggttctg gcaaccagca
      241 aaagcccgtc cctttgctca tgagcttttt ctaaatattc aaatgcttta tcatggaact
      301 tcaatgagta agccgcacaa ctcaaaaaga aacctgaaat atattccgtt tgtgatctta
      361 aaagcaattc attatagatc ttttgagctt cgtccaaatc gccgatgacg gaatagatcc
      421 agcataggtc gcttaagggc cattgatgac gtatggaaag aattgctgcc cgtttcaacg
      481 cgtcaatcgc ttcgtcatat cgtttcaata atgccaggct caaacctaaa tacctgtacg
      541 agaggaagga tttgtcgtcg agcaacgctc ccatttcgca tgcctttaca gcatcctcaa
      601 aacggcctgc gccgagatat acgacggcca tcaaactgta ttgaaccgcg gtcaatggtt
      661 caagttccaa tgctttcgtt ccttccttaa ttgcatgctg atggtcccgg tccaccgtcg
      721 acaggaagag gctgtaccag taatgtgcag gagcatgatt gaaatttatt tccagcgcct
      781 ttttaaaatg atgtcttgcc ttttcccagt tccagtcata aaaggagctt aggaatgcaa
      841 gcgttgtatg cacctcggca agggaatcat cgatttccgc cgcttttaaa gctgcctctt
      901 ttgcacgagg tccacactct gacggagcca tcatggcata aaagccgaga aatgcgtagg
      961 catcggcgag gcctgcataa gcaagagcga aattcggatc caactcaacg gcctgctgaa
     1021 aatacataat acatttctta agacccaggc ctctctgcat ccaatagaag cgtcctttca
     1081 aatacaattc atacgcctcc tgtttttgag aaggtgcctt attgatgcgc attctttctt
     1141 tttcaagcag ggttactttc aactcttcag tgatagcgac agcgatctct tcctgtatcg
     1201 caaaaatatc atccatggta cgatcgtatt tctcagacca gagatgaaat ccatttctta
     1261 cattgatcaa ttgcgcggta acgcgaacgc gattgccctg cttgcgcaca ctgccttcca
     1321 atacagtgct cacacgaagt ttttcaccaa catcgcgaac atcgacatta gctcctttga
     1381 attggaatga agacatacgc ccaaccactt tcagatcgcg tatgtgtacc agggagttga
     1441 tgatttcttc tgccatgcca tcactgaaat attcctgctc actatcgttg ctcatattta
     1501 caaatggcaa taccgcaatg cttttcccgg cattgtacat cggatatttt ttcttcgtat
     1561 tgctatcttt cattggtctt tcaggcttca atgaaaatgg atccgtattg ctttcagttt
     1621 ttcccgttaa tgtgccagga acaggtttta ccagcttttc atggtcgagc gcgaacacct
     1681 ctattttacg gtcaacattc ttaaactggt aaatgcctac agaataggtt ttgaattccc
     1741 gatgattgct gatctcatca tttactttat cggatatcaa tacgctgcct gctactccaa
     1801 gggattcaat acgtgatgca acattcaccc cgtcgcccac tatatcctca tcgtgatgaa
     1861 tgatgtcacc aacatgtacc cccattctca caggcacccg tggcggttga caaaatgttt
     1921 gttgcatagc aagcgcacat tgcacggcat caacaacgct ttggaaaaca ctaagggcgc
     1981 cgtctccgta atactggatg atacggccat taaattgttt gtgttcccgt tccaggatct
     2041 cccggtgacg gtttcttata agaattgcct tctcctcatc ctgccgcata attgcggtat
     2101 aaccttcaat atctgtgaac actattgcag aaagctggcg gaattgagac atttcgaaat
     2161 tataagggac gacaataaaa tggaatcatg aacgcagtgt cattgcctgc aaaacacaac
     2221 ccctgtcgta tgagaaaatc ctgacgatct cttgtaaaaa acagtggaat gcgtgcggca
     2281 ggccgctcgc gatggtcgca aaagtacttt ttgccttaat agcattttgc gtcatctgac
     2341 gcaaaatgct attctcttcc caacattggg agaaatagtt agaccttgat tttgcttaga
     2401 aagcactcca tattttgaac aaaggaatcc aattgagcaa gcaaatgtta taaatggact
     2461 ccatcttctc tgttatggct ttgcgcacgg gcatgggctc aggtttgaat aaccaaaagt
     2521 tacgtgattt aaattagcat tcgtggaatc gaagccgcga tgtccctggc tatcgcgcaa
     2581 agctattgag gaaacattgc ggggaagggg aaataaattt tttctggggc tgtcagctcc
     2641 agttcaaata tcaacggcgg cttgggcttt ccactgcgcg accgcgtgct aaccgtccac
     2701 ctttaggggg agttggaggc ggttgcaggc cttgagcgag agaattaaat tgaggtgacg
     2761 aataactaaa aaatcaactc ttcttccatg gcgcaatgcg aactaaagga tcaggcagga
     2821 attgcccaac tggtcatcat ctctgcccgc aattagcttt atgattttat ggaccgtctt
     2881 tttaagcagg ataatttttt cataagccga atctccaaag agaaatttca taatgacctc
     2941 ccgttttgag tttaaaacaa tttgttctga tttttaaatt tcggtttcaa aggacatgcc
     3001 actgcataaa tttccggaaa gcctgaattt ttttccattt gcatattgaa aatttgacag
     3061 ttttgctaca gcacttcgtt ataaccaatt gtggtatcga atatgtgata cgttccataa
     3121 tggatacccg gttttacata gcttttagtt tcaaaataga tgacgattat caaccctttg
     3181 cgaaattttt cctgggcaac aaccgtgaga ttgccgatac tatttttaaa tccctgaagg
     3241 gatctgatga tgtgaacgaa atgaatgtgc tatacatgga tttcgttgaa acatgggaag
     3301 gattgccgaa aaatctcaag gttaagtctt gcaccctccc ggagttggca gagaattgca
     3361 gcatcatcac gagagagctt tttaagtttg ctaatcttga agggtatatg ccactgcctt
     3421 agtccggata gtcaccggtc ccactgcac
//
LOCUS       DASQJI010000388         8951 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1427279,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000388 DASQJI010000000
VERSION     DASQJI010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8951
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1427279"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /gene="paaC"
                     /locus_tag="VEV83_10815"
     CDS             <1..462
                     /gene="paaC"
                     /locus_tag="VEV83_10815"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HYK45651.1"
                     /translation="RQFFFSNYQHLLYEKLQDSSDDQLAAIAAKALKEIVYHLRWSSE
                     WVIRLGDGTDESHLRMSDAVEELWPYVYEMFMPAEYETELSEEKISVDVSSLKHLWLH
                     KTEEIFSEATLVIPENNFAHKGGKEGMHTEQLGFILAEMQFLQRAYPNLTW"
     gene            487..1011
                     /gene="paaD"
                     /locus_tag="VEV83_10820"
     CDS             487..1011
                     /gene="paaD"
                     /locus_tag="VEV83_10820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HYK45652.1"
                     /translation="MMDVKTITTEDILAILETVTDPEVPVLSVVDLGIVRKIEIYDAV
                     ETPHSIGVRVFITPTYSGCPAMDVIQINIRMALLEHGFNNVEIKTLLSPPWTTEWMSE
                     AGKQKLKAYGIAPPNVMQQVCTPGAFQKEEAVQCPHCNSFRTEIVSRFGSTPCKALYQ
                     CKDCKEPFDYFKCH"
     gene            1067..1843
                     /locus_tag="VEV83_10825"
     CDS             1067..1843
                     /locus_tag="VEV83_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HYK45653.1"
                     /translation="METVLLHVAGNVAYISLNRPEKLNAFNREMALLLQDKLEECAAS
                     SDVRSIYITGAGKGFSAGQDLAEVVDPNGPGMEKILSEQFNPVIKKIRTIEKPVVAAV
                     NGVAAGAGANIALCCDIVVAADSASFIQAFSKIGLIPDSGGTYFLPRLIGFQKASALM
                     MLGEKIAAQDAERLGMVYKIFPDEVFERESKNIAETLAQMPTRGLWFTKNALNKTFNN
                     SFKKQLKLEDELQQEAAATDDFKEGVASFLEKRKPNFSGK"
     gene            1849..2277
                     /gene="paaI"
                     /locus_tag="VEV83_10830"
     CDS             1849..2277
                     /gene="paaI"
                     /locus_tag="VEV83_10830"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HYK45654.1"
                     /translation="MDDLHNKVVSHMMQHDAFSQWLGITVLEIRKGYSKLKMTVRPEM
                     MNGFHVAHGGVAFSLADSAFAFACNNRNNLSLALDVTISFLKTVHTGDELTAEAKEIH
                     NGKSTGVYLITVTNQHQHEVALFKGTCFRTGKRLIDEEEL"
     gene            complement(2272..2745)
                     /gene="bcp"
                     /locus_tag="VEV83_10835"
     CDS             complement(2272..2745)
                     /gene="bcp"
                     /locus_tag="VEV83_10835"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HYK45655.1"
                     /translation="MIQVSEGMKAPAFKGKDQNGNNVSLADFKGKKVVLYFYPEDDTP
                     TCTVEACNLRDNYGLLKKEGFEVLGVSPDDSKSHKKFEQKFSLPFTLIADPDHKIIDS
                     YGVWGEKQLYGRKYMGLHRTTFLIDEKGIVRKVFLKPRSKQHAEDIVKFWKQEGS"
     gene            complement(2753..4468)
                     /locus_tag="VEV83_10840"
     CDS             complement(2753..4468)
                     /locus_tag="VEV83_10840"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HYK45656.1"
                     /translation="MKIEHRRLFFSLFFLAFFVRLSAQSNYPQGYFRDPLAIPIQLAA
                     NFGELRPDHFHMGLDIRTESKENLPVYAAADGYVSHIRIEKNGYGRAIFITHPNGYTT
                     LYAHLNRFFDGLETYVKEKQYNDEKWNQDFSIPKGLFPVAKGQFIAYSGNTGASQGPH
                     LHFEIRDTKTGNNINPLLFGFDVPDDIPPVIYSLSWYDRRYSIYSVHPQPVPIVKTNE
                     TYATRDSIVKISSPVFSFGINMEDLNNTSPFRYGVYHAALRMDDSLLFEFKLNNFLYD
                     DSRYVNASMDYSTWVSNDRGIQHLSVLPGNRLQIFTHTGSDGKILLKDSSVHTIQILV
                     SDENENESIIQFLVRYDDSLQKQYSIPAGATVCMPLGQNNVETAHAKLHFDEKAFYDA
                     VPFVINESEAQTSNQVSPTIHAASYLIPVHSAYDISIKVTKPFPDSLKDKVVMKLITG
                     SSKRIATGEWENDRMLGSFDELGDVSLVIDTIAPAVTPVGWRNGSVVKSKQNLIVSCK
                     DDQSRIETFRAELDGSWLMFSRKNDYFIYTFDEHCSGGGHNLVITATDVAGNSTTRSF
                     NFVKQ"
     gene            4559..5644
                     /locus_tag="VEV83_10845"
     CDS             4559..5644
                     /locus_tag="VEV83_10845"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HYK45657.1"
                     /translation="MQNFWEQVWWNNSLRMYGIVLAEIAGVWIIFKLFRKFIIGTLKK
                     VAGRTASEVDDAIVVAADKFIIPYLYLVINYAIIDQLTFSPHAENVLKVVVAVITAYY
                     FVRFINHTIHLSVLLYMQKKEEPPERIKQLNGVLLMIKVLIWIGGFLMLIENLGYNIT
                     TIITGLGIGGIAIALAAQNILGDLFSYFVIFFDKPFEIGDTISVNNNTGTVERIGIKT
                     SHVRSVSGEQLIIPNADLVKSTIKNIKRLERRGIIFKLNVRYDTPEEKLRSLPDLIRS
                     IINKHEHATLERCHLVAFGDFSLTYETLYFIDTPDMITYLNIQQDIYLEIMNAFSKQG
                     IDFAFPGQTFVLQHPGPPPIPVSPKGQ"
     gene            6052..>8951
                     /locus_tag="VEV83_10850"
     CDS             6052..>8951
                     /locus_tag="VEV83_10850"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HYK45658.1"
                     /translation="MYYRLMLIFSCVWCLSAYAQQKGYYRNPCIYQNLVIFTAEGDLW
                     KYDIATGASARLTTNAGLEEDPCISPDGKQVVFNGQYEGTSELYLMNVDGGVPRRITY
                     DFDGGYVQACGWTNDRKILYRTSAFSSIPQPQLMKLDPATLTREKIPLWQASYGCYDD
                     AGVLYFTRFPNQGSRTKRYKGGLIEQLWRFNGNTEATCLTADFDGTSTNPMLYNDRVY
                     FLSDRDGTMNIWSMNKDGKELKQQTFSKGWDIQTPSINDSKIVYQKGADIWLYDIRTN
                     QEKMLDINLSSDFDQRKPKWIKSPATSISYADISPSGNYAAIVSRGRVFVSPSKSDRW
                     VEVVRKSGIRFKDVHFINDKTLAVLSDESGEFEVWKINADGSDTAKQITRNSKTIITF
                     FSFSPDGKYIAYDDKNEVLRVADAATGEVRFHYDSSYGGVSELSWSRDSRFLTFTETI
                     ENQNSVIEVVDMHGMKMFPATTDRLNSYNPSWSADSNWLYFLSERNLVSQIRSPWGPR
                     QPEPVYVNTVNIYAMPLDTAAKFPFLQTDSWLTDSVFNPSANSKSKKSEKSSEKNYDW
                     KYTLSKLYQVPVKNANMDNLAVADGYLYWLKEPTDQTDESGGKLYAIKIEESKQYEPI
                     EVAQSVRSFRLSANRKKLLIYFVSRSFAIADANGEKVDTSKAKLQLDNWSFRVNPQQE
                     WKQMFDDAWRMMRDYFYDRDLHQVNWLAIRQQYEPLVDRVTDRDELDDLLSQMVGELS
                     ALHTFVFGGDKRRSPDMIQAGFLGGTFSKTANGLRIDHIFKSDKDFPDFSSPLNKPEL
                     RIREGDIITAVNNVPLHDVADIAELLANKVKIPVKLTLLDRNNKIYEQVVKPCSAQDN
                     YTLRYEEWELSNRGKVDSMSNDKIGYVHLKAMTGNDMDDFVKQFYPIFNRQGLILDVR
                     ENFGGNIDSWVLEKLLRKAWMFWQGRSGGPYSNMQYAFRGHMVILCDQQTAS"
BASE COUNT         2542 a         1912 c         2092 g         2405 t
ORIGIN      
        1 cggcagttct ttttcagtaa ctaccaacat ctattgtacg aaaagttgca agacagtagc
       61 gatgatcaat tggcggcgat tgcagcaaaa gcattgaaag aaattgttta tcatttgcgg
      121 tggagcagcg aatgggtgat caggctcggg gacgggaccg atgaaagtca tctccgcatg
      181 tcggacgccg tagaagaatt atggccgtac gtgtacgaaa tgtttatgcc cgcggaatat
      241 gaaactgaat tgtcagaaga aaagatctct gttgacgtgt catctctaaa acatttgtgg
      301 cttcataaga cggaagaaat attttcggag gcaacgcttg tcattccgga gaataatttt
      361 gctcacaagg gtggtaaaga aggaatgcat acggagcaac ttgggtttat acttgctgaa
      421 atgcaattct tacaaagggc gtatccaaat ttaacgtggt aagccccagc cctaaaggga
      481 gtagctatga tggatgtaaa aacaataaca acagaagata tacttgcaat ccttgagacg
      541 gtgacggatc ccgaagttcc cgtattgtct gtggttgatc tcggcattgt aagaaagatc
      601 gaaatttacg acgctgtaga aacgccccat tcaataggtg tgcgggtttt tattacgcca
      661 acttattctg gctgtcctgc aatggacgtg atccagatca atatccgcat ggcgttactt
      721 gaacatggtt ttaataatgt tgagatcaag actcttttat cgccgccatg gacaacagag
      781 tggatgagtg aagcggggaa acaaaaacta aaagcttacg ggatcgcgcc tccaaatgtt
      841 atgcaacagg tatgtacgcc gggcgctttt caaaaagaag aagccgttca gtgcccgcat
      901 tgtaattcat ttcgcaccga aatcgtcagc cgctttggtt ctactccatg taaagcttta
      961 tatcaatgca aagactgcaa ggaacccttc gactacttta aatgccattg atattttatc
     1021 ggcctgccct gagatcagtg tgcataatct tacataacat tgccagatgg aaacagtcct
     1081 tttacatgtt gccggtaacg ttgcttacat atctcttaac cgcccggaaa aattgaatgc
     1141 cttcaacagg gaaatggctt tgttactcca ggacaaactc gaagaatgcg ccgcatcttc
     1201 cgacgtgcgc agcatttaca ttacaggtgc aggaaaaggt ttttctgccg gacaggacct
     1261 tgctgaagtc gttgatccga acgggccggg tatggaaaaa attttgagtg aacaatttaa
     1321 tccggtcata aaaaaaattc gcacgattga aaaaccagtt gttgccgccg tgaacggtgt
     1381 ggccgctggt gccggtgcga acattgcttt gtgttgcgat attgttgtcg ctgcagattc
     1441 agcttctttt atacaggcat tttctaagat cgggttgata ccggatagcg gggggacata
     1501 ttttcttcca cggttgatcg gttttcagaa agccagcgcg ttgatgatgc tgggagaaaa
     1561 aattgctgca caggacgcag aaaggctagg catggtgtat aaaatttttc cggacgaagt
     1621 gttcgaacgg gaatcaaaaa atattgctga aacacttgct caaatgccca cgcgtggttt
     1681 gtggtttacg aagaatgcgt tgaacaaaac gtttaataac agtttcaaga agcaactaaa
     1741 gctggaagac gaattgcagc aggaagctgc agccacggat gattttaagg aaggtgtcgc
     1801 atcgttttta gaaaaaagaa aaccaaactt ctcaggaaaa taatttctat ggatgatctg
     1861 cataacaaag ttgtttcaca catgatgcaa cacgatgcat tcagccaatg gcttggtatt
     1921 acggttttag aaattcgaaa aggttacagc aaactaaaga tgaccgttcg tcctgagatg
     1981 atgaatggat ttcatgtggc gcatggcggt gttgccttct cccttgccga cagcgctttc
     2041 gcatttgcat gtaacaaccg taacaatttg tcgttggcgt tggatgtcac catatcgttt
     2101 ttgaaaacag ttcacactgg cgatgaacta actgcagagg caaaagaaat tcataacggt
     2161 aaaagcacgg gcgtgtatct cattaccgtc actaatcagc atcagcacga agtggcatta
     2221 tttaagggaa cttgtttcag aacagggaag aggctgatcg acgaagagga attatgagcc
     2281 ttcctgtttc caaaacttca caatatcttc tgcgtgctgt ttacttcgtg gtttcaggaa
     2341 aacttttctc acaatacctt tttcatcaat gagaaacgta gtgcgatgca gacccatata
     2401 ttttcttccg tacaattgct tctcacccca cacgccgtag ctgtcaatta ttttatgatc
     2461 gggatctgca attaaggtaa atggtaagct gaatttctgt tcaaattttt tatggctttt
     2521 cgaatcatca ggacttacac caagtacttc aaagccttct ttttttaata gtccgtagtt
     2581 atcacgaagg ttgcatgctt ccactgtaca cgtcggtgta tcgtcttcag gatagaagta
     2641 caaaacaact tttttccctt tgaaatcggc aagcgaaacg ttattgccgt tttggtcttt
     2701 gcccttgaat gcaggcgctt tcatgccttc ggaaacttgt atcatgagat cgttattgct
     2761 tcacaaaatt aaaagatcgc gttgtgctgt tacccgccac gtcggtagct gtgattacta
     2821 aattatgccc gccgccagaa caatgttcat caaatgtata aatgaaataa tcattttttc
     2881 tggagaacat cagccagctt ccgtctagtt cggcgcgaaa tgtttcgatg cggctttgat
     2941 cgtccttgca actcacaatt aaattttgtt tgctttttac gacagatccg tttctccacc
     3001 ccactggcgt aactgccggt gcgatagtgt cgatcacaag gctcacatca cccagctcgt
     3061 cgaagcttcc gagcatccgg tcgttctccc attcgccggt tgctatcctt ttcgagctac
     3121 ccgttatcag cttcataaca actttatctt ttaaggagtc gggaaagggc ttggttacct
     3181 ttatcgaaat gtcataggcg ctgtgaaccg ggatcaaata agaggccgca tgtatcgtcg
     3241 gcgatacctg gtttgatgtt tgagcctcgc tttcatttat tacaaatggc actgcatcgt
     3301 aaaatgcttt ctcatcgaaa tgcaattttg catgcgcggt ttcaacgtta ttctgcccga
     3361 gcggcatgca tacagttgca ccggcaggaa tgctgtattg tttttgtaac gaatcatcat
     3421 atcgcacgag gaattgtata atgctctcgt tttcgttttc atcactcacc aggatttgaa
     3481 tcgtgtgcac ggagctatcc ttcaacaata tttttccatc cgatccggtg tgggtaaaga
     3541 tctgcaggcg gttacccggc aacacggaaa gatgttgaat gccgcggtca ttgctgaccc
     3601 atgtggaata atccatcgat gcatttacgt agcgactgtc atcgtataaa aagttattca
     3661 acttgaattc aaacaacaat gaatcatcca ttctcagcgc cgcatgatac accccatacc
     3721 gaaacggtga tgtgttgttc aggtcttcca tattaattcc aaaactaaaa accggtgaac
     3781 tgatctttac aattgagtca cgcgttgcgt aggtttcgtt tgtttttacg atcggaacgg
     3841 gttgcggatg cacggaataa atactatatc gcctgtcata ccaactcaaa gaataaatga
     3901 caggaggtat gtcatcaggc acatcaaaac caaacaacaa cggatttatg ttattgcccg
     3961 tttttgtatc acggatctca aaatgcaaat gcggaccctg cgatgcgccc gtgtttccac
     4021 tgtatgcgat aaattgtccc tttgcgactg ggaacaggcc ctttggtatc gaaaaatcct
     4081 ggttccattt ttcatcgttg tactgcttct ctttcacata cgtttcaagg ccgtcgaaaa
     4141 atctgttcag gtgcgcatac aaagtagtat aaccgttcgg atgggttata aatatcgcac
     4201 gaccgtaccc attcttttca atgcgaatat ggctcacgta gccatccgct gcagcataaa
     4261 ccgggagatt ttcttttgat tccgtgcgga tatcgagacc catgtgaaaa tgatcggggc
     4321 gcaactcgcc aaagtttgca gccagttgaa ttggaatcgc aagcggatca cgaaagtaac
     4381 cctgcgggta gtttgattgt gcgctaaggc ggacgaaaaa agcaaggaaa aacaatgaaa
     4441 agaaaagacg gcgatgttcg attttcatgg attgaatcaa aaatacattt tctgaaagaa
     4501 atagagtttt attgtgatgc attagcagat atttttgcat tcgccagtca ggtattttat
     4561 gcaaaatttt tgggaacagg tatggtggaa caacagcttg cgcatgtacg gcatcgtgct
     4621 ggcagaaatc gctggtgtct ggataatttt caagcttttt agaaaattta taatcggcac
     4681 actgaaaaag gtggccggcc gtaccgcatc cgaagttgac gacgcaattg tcgttgctgc
     4741 ggataaattc atcattcctt atttatacct ggtcatcaat tatgctatca tcgatcaatt
     4801 aacattttct ccgcacgcag aaaatgtact gaaggtcgtt gtcgcggtga tcacagctta
     4861 ttatttcgtg cgctttataa atcataccat tcacttgagc gtgttgttgt acatgcagaa
     4921 aaaagaggag ccgcccgagc gcatcaaaca gctcaacgga gttctgctga tgataaaagt
     4981 attgatatgg atcgggggat ttttgatgct gatcgaaaac cttggataca atattacgac
     5041 catcatcacg gggctcggca tcggtggcat tgcgatagcg cttgctgccc aaaacattct
     5101 cggtgacctg ttcagttatt ttgtgatctt ttttgataag cctttcgaga ttggcgatac
     5161 gatctctgta aataataaca ctggaactgt tgagcgtatc ggcatcaaga cctctcacgt
     5221 ccgcagcgtg tcaggcgaac aactgattat cccaaatgca gacctggtaa aatcaacgat
     5281 aaaaaatatt aagaggctcg aaagaagagg gatcatcttc aaattgaatg tgcgctatga
     5341 tactcctgaa gaaaaattaa gatcacttcc tgatcttatc aggtccatca tcaacaaaca
     5401 cgagcacgca accttagagc gttgccacct ggtcgcgttc ggcgatttca gcctcaccta
     5461 cgagacgttg tattttattg atacgccgga catgatcaca tacctcaata ttcagcagga
     5521 tatttacctt gagataatga acgccttcag taaacaagga atcgattttg cttttccggg
     5581 gcaaacattc gtactgcagc atccgggtcc gccgccgatt cccgtatctc ctaaaggcca
     5641 gtagaaactg ttaccgtcac ctcgacgaca gaagaggtct caacgaatcg ttggaatggt
     5701 ttggagataa tgaacgcctt tagtaaacaa ggaatcgatt tcgcttttcc tcggcagaca
     5761 ttcatactgc aacatccggc tccgccgccg attccagcat ccgcctaagg gtggtagcct
     5821 gttaccgtca cctcgacggc aggagagctc tcaacgaatc cttggaatcg cctgagataa
     5881 atgaacgctt tgagtaagaa ggaatcgatt tcgctttttt ccaggcaagc attcaaacag
     5941 caatatcccg gccgtctcct aacgaagtag aaccatctgt ccgattaaat accagcgaat
     6001 cgtcgcggtg ctggtaaaat tcctattttc aattcctaaa aaaatctgct tatgtactac
     6061 aggttaatgc tgatcttttc ttgtgtatgg tgtctttctg cgtacgcgca gcaaaaaggt
     6121 tattaccgga atccgtgcat ctatcagaac ctcgtaatat ttaccgccga aggcgaccta
     6181 tggaaatatg atattgccac aggcgccagt gcgcgtctaa ctacaaacgc agggttggaa
     6241 gaagatccgt gtatttctcc cgacggaaag caggttgttt tcaacggcca gtatgaaggc
     6301 acgtccgagc tatacctgat gaacgtcgac ggtggtgtgc cgaggcgcat tacctacgat
     6361 tttgatggcg ggtatgtgca agcatgcggt tggacaaacg atagaaaaat tctttaccgc
     6421 acgtctgcct ttagttctat ccctcaacca caacttatga aactcgaccc ggcaacacta
     6481 acgagagaaa aaattccttt atggcaagca tcatacggct gctatgatga tgccggcgtt
     6541 ctgtatttca cccggtttcc aaaccagggc agcagaacga aaagatataa aggcggcctc
     6601 atcgagcagc tttggagatt caatggtaac actgaggcga cgtgtctcac cgccgacttc
     6661 gacggaacga gcaccaaccc aatgctgtat aatgaccggg tttacttttt gtctgaccgc
     6721 gatggcacca tgaatatctg gagcatgaat aaagacggga aagagcttaa gcaacagacg
     6781 ttttctaaag gctgggatat tcaaacacct tctattaatg attcgaagat cgtgtatcag
     6841 aagggcgccg acatatggct gtatgatatc aggacaaatc aagaaaagat gctcgacatt
     6901 aacctgtcgt ctgattttga tcagcgcaaa ccaaaatgga taaagagccc cgcgacgagt
     6961 atttcttatg cagacatttc gccgagcgga aactacgctg ctatcgttag caggggaaga
     7021 gtttttgtgt ctccttccaa aagcgatcga tgggtggaag tggtgcgcaa gagcggcatc
     7081 cgttttaagg atgtgcattt catcaatgat aaaacgctcg ctgttttgtc ggatgaaagc
     7141 ggagaatttg aagtttggaa aataaacgct gacggcagcg acacggctaa acaaataacg
     7201 cggaacagta aaacgatcat cacttttttc agcttttctc ccgatggaaa atatattgca
     7261 tacgacgata agaatgaagt actgcgtgtg gcggatgcag caaccggtga agtaagattt
     7321 cattacgaca gctcttatgg tggtgtgagt gaattatcgt ggtcacgcga cagccggttt
     7381 ctgaccttta ctgagaccat cgaaaaccag aactcagtaa tagaggtagt agatatgcat
     7441 ggtatgaaga tgttcccggc aactacggac aggttgaaca gttataatcc ctcatggtcg
     7501 gcagacagca attggttata ttttctttcg gaaagaaatc ttgtgtcgca gatccgttcg
     7561 ccatggggac cgcgccagcc ggaaccggtt tacgtgaaca cggtcaacat atatgcgatg
     7621 ccgttggata cggccgcaaa gtttcctttc ctgcaaacag actcatggct taccgattct
     7681 gtttttaatc cttcagcaaa cagcaagtcc aaaaaaagcg aaaagtcttc tgaaaaaaat
     7741 tacgactgga agtatacgct gagtaagctt taccaggtgc ctgttaaaaa cgccaatatg
     7801 gataacctgg cggttgccga cggttatcta tactggctga aggagccgac tgatcaaaca
     7861 gacgagagcg ggggcaagct atatgcgata aaaattgaag aaagcaaaca atacgagcca
     7921 atcgaggttg ctcaaagcgt aagatctttc cggctatccg cgaatagaaa gaagttacta
     7981 atctattttg tttcgagatc ttttgcgatc gccgatgcaa atggtgaaaa agtggacacg
     8041 tcgaaagcaa agcttcagtt ggataattgg agcttccggg taaatccgca gcaggaatgg
     8101 aagcaaatgt ttgacgatgc atggcgtatg atgcgcgact atttttatga cagggacctg
     8161 caccaggtta actggctggc tataagacaa caatatgaac ctttggttga cagggtaacg
     8221 gatcgtgatg aactcgacga cctgcttagc cagatggtgg gtgaattgtc agcattgcac
     8281 acatttgtgt ttggtggcga caagcgtcgt tcaccggaca tgatacaggc tggattctta
     8341 ggcggcactt tcagcaagac agcgaacggc ctgcgcattg atcatatttt taaaagcgac
     8401 aaagattttc cggatttttc ttcgccgtta aataaacctg aactgcgcat acgcgagggc
     8461 gatatcatca ctgcggtaaa caacgtgccg ttgcacgatg ttgctgacat cgcagaattg
     8521 ctggcaaaca aagtgaagat acccgtgaag ctaacgttac ttgatagaaa caataaaata
     8581 tatgaacaag tggtgaagcc ctgttcagcg caggacaatt atacgctgcg atatgaagaa
     8641 tgggaacttt caaacagggg gaaagtagat agcatgagca atgataagat cggttatgtg
     8701 catttgaagg cgatgacagg taacgacatg gatgattttg tgaaacagtt ctatcccatt
     8761 ttcaatcggc agggattgat cctcgatgta cgtgaaaact ttggcggcaa catagacagt
     8821 tgggtattgg aaaaattgtt gcggaaggcg tggatgttct ggcaggggcg ttcgggcggg
     8881 ccgtattcaa atatgcaata tgcattccgc ggccacatgg tgatactgtg cgaccagcaa
     8941 accgcatcag a
//
LOCUS       DASQJI010000389        29286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1887753,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000389 DASQJI010000000
VERSION     DASQJI010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 29286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29286
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887753"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..2463
                     /locus_tag="VEV83_10855"
     CDS             289..2463
                     /locus_tag="VEV83_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYK45659.1"
                     /translation="MRNTLLIAFLLVYIPLTAQKKNSAYQLHIHRTHSEINIDGAMDD
                     SAWQHAESASNFFMVLPMDTSHAQVPTEVKMSYDENNLYIIAICYLATPHPYMVESLR
                     RDFVFGKNDNFIFFIDPFDDRTNGFTFGANAAGAQWDGMLYEGGSADLSWDNKWISAV
                     KNYPDKWIFEASIPFKTIRYKKGITTWGINFSRLDITAAEKSAWAPVPRQFPTAALAY
                     TGTLVWDEAPPQIPSNISLIPYALGGVSKDYENKKSAVYRKDVGGDAKIAITSSLNLD
                     LTVNPDFSQVEVDKQVTNLDRYELFFPEKRQFFLENADLFSNFGYANIRPFFSRRIGL
                     NTPIDFGARLSGSINKNWRIGAMDMQTRHDDATGLPTQNFAVLALQRRVFSRSNIRFM
                     FVNKQSLNYDPEKEDSTKPEYSQYNRNLGIEYNLASADNLWKGKALLLKSFSPGIHDS
                     DFVQAANLQYNSKKWLISWAHEIVGKDYVAEVGYVPRKNYIKLNPSIGYLFFPKGGSI
                     LSHGPKINSTYFFDHDFHQTDNETYALYALNFRDQSTTDGWISHDYVQLLQPFDPTNS
                     GKDSLPQGTKHRWNAFGLEYFSKPQHLFTYSFSTRYGGYYADGTRLSLTAEAGYRFQP
                     YVSILVDASYNHIELPDPWGLNDFWLIGPRVDVTFTNTLFFTTFIQYNNQLKNINLNT
                     RFQWRYAPASDLFLVYTDNYFSTPLAVRNRAFVLKFTYWWNL"
     gene            complement(2811..3890)
                     /locus_tag="VEV83_10860"
     CDS             complement(2811..3890)
                     /locus_tag="VEV83_10860"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkane 1-monooxygenase"
                     /protein_id="HYK45660.1"
                     /translation="MHARSLKYVTPLLVYALAAVAFTQHGIYCWFGLIYAWVMIPVAE
                     LFLKPDEKNMTAAEEELAKKDKVYDWMLYVAVILLYPMLALFLFSMNESLSSSDLVAR
                     IATMGLLCGAFGINVGHELGHRVNRFEQRLAKTSLLVSLYMHFFIEHNKGHHKNVATE
                     EDPGSARLNEPVYMFYLRTIFFSYIHAWRIANKEVFRRKRRVIAFSNEMIQMHIIQAA
                     FVAIIFMLFGWRITLYYLAAALIGILLLETVNYIEHYGLTRKKIAPGKYERAMPHHSW
                     NSDHIIGRLMLFELSRHSDHHYVASRKYQVLRRHENAPQMPTGYPGMIILALFPPAWF
                     YVMHKQMNRYGLLEEERTQELSIQL"
     gene            4001..5470
                     /locus_tag="VEV83_10865"
     CDS             4001..5470
                     /locus_tag="VEV83_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HYK45661.1"
                     /translation="MAASQQRKNQHLLWRAGFGVNTETVKDIAVAPPEVLYTMLETAS
                     SSRPAYIDVADNTLKGLMMGIQQVAELQQAEKPMTDEQRKKFKKESIQNIRTLNTSWL
                     NEMVETDAQLREKMALFWHGHFACRNLNIFYQQLLLDEIRTNALTNFRDLLKGVSKSA
                     AMLNFLNNQQNQKKHPNENFAREVMELFTLGRGNYSEQDVKEAARAFTGWSAKFNGDF
                     LFRPFIHDDGEKTFLGKTGNFSGDDIVQILLEQKQTAKFITTKIYRYFVNDVVDEELC
                     NDLADAFYQSNYDIKTLMKNIFTSDWFYDEKNIGCRIKSPVELLVGIRRILPMQLENE
                     GIQILLQRALGQILFYPPNVAGWPGGKTWIDSSTLMLRLRMPQLIKEDDTVYITPKQD
                     DDVQMGMQNNDASNDRKNFRSDGFKITASIDWDKYIRQFDEVNDKELYDAIEAVVLQT
                     NKGSVSKSVIESNVQSKNKEEYIKSTTISLMSTPEYQLC"
     gene            5645..6850
                     /locus_tag="VEV83_10870"
     CDS             5645..6850
                     /locus_tag="VEV83_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HYK45662.1"
                     /translation="MLIKRRQFLQTGTLATASFMVPKFLKAFETREFAMVPPGNKIVV
                     VLQLSGGNDGLNTVIPVRNDIYYKSRPALGINKEKTLLLTDEAGLHPQLTAFKEMFDD
                     GSLGILNSIGYPNPDRSHFRSMDIWQTASASNEFITTGWVGRYLDARCNGCGEPTQAL
                     ELDDILSLALKGEKEKGIAFKDPRRLYNTSHENYFSQLAAQHHAEEYERPVDYLYKTM
                     AETLSSANYIYEQSRLRPTKADYPQTELGNHLKTIASLILSDINTKIYYVSLGSFDTH
                     VFQQNTQQRLFKQLNDAVSAFVKDMKSNSRFDDVLLFTFSEFGRRVSQNASGGTDHGT
                     ANNMFLVSGGLKEKGLINELPDLDDLDEGDLKYKIDFKNVYATVLNKWLQADDKVILE
                     KNFDLLSFI"
     gene            7010..8182
                     /locus_tag="VEV83_10875"
     CDS             7010..8182
                     /locus_tag="VEV83_10875"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HYK45663.1"
                     /translation="MLQLPVYLDNNATTQCDPRVVEAMLPYFGEKFGNAASKSHSFGW
                     IAEEAVENAREQLAELINAHPKEIVFTSGATESDNLAIKGAFEMYSSKGNHIITAATE
                     HKAVLDTCKHIEKLGGEITYLPVDSDGRIRVAELEASIRPSTILIAIMYANNEIGTIQ
                     PVREIASVAKKHDVLFFCDAAQAVGKIRVDVIADGIDLLAFTAHKMYGPKGIGALYVR
                     RKDPRVRLTAQVDGGGHERGMRSGTLNVPAIVGFGKACELCTTEMNQDTKRLLALRNK
                     LENALVFLNDVSVNGSPEHRLPHTTNLSFKEVSAERLMMTFNRNIAVSSGSACTSALV
                     EPSYVLKALGLPDDLARSSLRFGLGRFTTEEQIDYVIEEVAKNLARLKGTQVVKGH"
     gene            complement(8202..8468)
                     /locus_tag="VEV83_10880"
     CDS             complement(8202..8468)
                     /locus_tag="VEV83_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45664.1"
                     /translation="MNTTINLVFPGDLRRGYCGSWCPSCSSFFVVSDRTYYVSKHIIF
                     TVEPGYGIFRKLRSGVERNKNYVVDYKWNDRLFIKLNASYRIRL"
     gene            complement(8750..10714)
                     /locus_tag="VEV83_10885"
     CDS             complement(8750..10714)
                     /locus_tag="VEV83_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HYK45665.1"
                     /translation="MKKILSLGLLLISCFHVIANVSLPKIFGDNMVLQRNKPIPVWGW
                     ADANEKLTIKFNQQTKSVTADNNGKWITKLDPEKAGGPYQLIVEGKNNVTFKNVLVGE
                     VWVCSGQSNMEMPIEGWGKVNNYEQEIKDANYPQIRHIKIPNTVASVPKDDIKSGEWE
                     ICNPQTAGDFTATGYFFARELYNQLKIPIGLINTSWGGTHVETWTSREAFENSDEFKS
                     MIADMPALDLDSLAKIRRAAMEKRMNELQGSLPNASEVATWKNVDFDDNKWPQMQLPS
                     LWEEKQLGELDGVVWFRKTIEISAADTGKPGTLELAMIDDNDITYVNGIEVGRTNSYN
                     AHRKYPIPFGPFSAGKIVIAVRVEDTGGGGGIYGEPGDMRLTIGDHVISLAGDWRFHV
                     ESVEGNASSVGPNEYPTLLFNAMVNPLIPYAIEGVIWYQGEANAGRAYQYRKAFPLMI
                     TDWRKHWQQGNFPFYFVQLASWNADNGNSAKGSSWAELREAQTIALSLPNTGMAVTTD
                     IGNSKDIHPKNKQDVGKRLAAIALHNVYDKDVVYSGPMYESMKIDGNKVKIYFKNIGG
                     GLMAKNGDLKGFEVAGADKKFYAATTTIDGDHVVVSNENVTAPVAVRFGWMDDAGADN
                     LFNKEGFPAGPFRTDDWPGITEKNKFAIVK"
     gene            10730..11011
                     /locus_tag="VEV83_10890"
     CDS             10730..11011
                     /locus_tag="VEV83_10890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45666.1"
                     /translation="MAKIIWDFVSAIIICNLWRGRQDLNNSTDNSWRWISAFKHEGFT
                     PNAIRKRRDIRTAARFIISKLQSLFIYSATLRGWHRGAGHVAAAFTCGY"
     gene            complement(11270..11779)
                     /locus_tag="VEV83_10895"
     CDS             complement(11270..11779)
                     /locus_tag="VEV83_10895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhR family membrane protein"
                     /protein_id="HYK45667.1"
                     /translation="MSTAVSPIPRTSASAAKTILLSGFIAGTLDMLAAILVYSVIMQK
                     VTAVQILHGIAAGVFGKNTVGNSTTMALIGLAFHYFIAFCFAIGYFLVYPHIPFLRKQ
                     KIISGLLYGTFVWAVMNFIVVPMSNAYHAPFAWPSAIRAAAILMICIGLPISLVTSRH
                     YQSKSVLVR"
     gene            complement(11809..12717)
                     /gene="moaCB"
                     /locus_tag="VEV83_10900"
     CDS             complement(11809..12717)
                     /gene="moaCB"
                     /locus_tag="VEV83_10900"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional molybdenum cofactor biosynthesis
                     protein MoaC/MoaB"
                     /protein_id="HYK45668.1"
                     /translation="MVDITHKSNSLRTAIAAAVINVSKEETIEAVRNKTVPKGDVFEF
                     SRAAGLLAIKKTSDVIPDCHPLPIEYAAIFHTISDQQILIRVEVRSIYKTGVEVEAMH
                     GAAIAALTIYDMLKPIDNGIEITSIKLESKHGGKRDFRHDVTDKLTSAVIVCSDSVSK
                     GIKHDTAGKAICEKLKEFGIAVTNYEIIADEFEVIQDKAKQFSDANYALVIFTGGTGL
                     SPRDVTPDAIRPLLSKEIPGVMEAARNYGQQRMPYAMLSRGVAGFIKNTLVLTLPGSS
                     QGATETMDALFPYILHVFQVVQGMQH"
     gene            complement(12719..13210)
                     /locus_tag="VEV83_10905"
     CDS             complement(12719..13210)
                     /locus_tag="VEV83_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HYK45669.1"
                     /translation="MEKDKQITLNGVAEKKLKNIFTDGPISPSFIAASIEKHSSMTNI
                     GAHTIFLGQVRSDVIDEKQVAAIEYSSYETMALEKMHQIREEMFRKYTLTCLHVHHSL
                     GTVKAGEISLFVFTSSAHRKAAIEACSEIVERIKKELPIWGKEIFVAVAGQKQTHKWK
                     ENF"
     gene            complement(13189..14304)
                     /locus_tag="VEV83_10910"
     CDS             complement(13189..14304)
                     /locus_tag="VEV83_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HYK45670.1"
                     /translation="MTDEISYERYQRQILLKEFGQEGQQKLLQSKVLVIGAGGLGCAA
                     LQYLAAAGVGTIGILDDDAVSLNNLHRQVLFSTDDIGSAKAQTAASKLKRLNPEIKII
                     FANSRITNENALGIISEYDIVIDGTDNFASRYLINDACVLLRKPLVYGAVSQFEGQVA
                     VFNCSRAARPVNYRDLFPQPPKENEVLNCAEAGVLGVLPGIIGTMQANETIKLITGIC
                     ETLTDRLLTYNALTNNTYVVNVSVNEEVDAFIPKDENEFLNTDYEWLCSSPVENDDEI
                     DIETFNDLLKEHDTTVVDVREYGELPAVNEFHHFQIPLSHLRSHQPLLNGDTIVVFCQ
                     TGKRSLEAVNILRNSSKDQKKIYSLRGGITEWKKTNK"
     gene            complement(14305..14535)
                     /locus_tag="VEV83_10915"
     CDS             complement(14305..14535)
                     /locus_tag="VEV83_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HYK45671.1"
                     /translation="MQVNVMVFGQIAEITGNSNFVIDVADTDQLINKLNSLYPTLQNA
                     KYAVAVNRQIIRKNTEIINGSEIAILPPFSGG"
     gene            complement(14554..15810)
                     /gene="glp"
                     /locus_tag="VEV83_10920"
     CDS             complement(14554..15810)
                     /gene="glp"
                     /locus_tag="VEV83_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HYK45672.1"
                     /translation="MKHYFINDALYSPSGEGGMKGNMGVGLISVNEAKRIVVENTVAS
                     QPVILALEEAIGLTLAENVFSKLDIPAFNQSSVDGYAFAFDDVRERLLVYGEMAAGAH
                     ENFSVSHGHAARIFTGAAIPGNADTVVMQEKTLIDDGKLIINDEMLQRGGNFRPKGSE
                     IKAGELALGKDSYLSPAAIGFFAGIGVTHVAVYERPSISIIVTGNELQTPGNILEFGQ
                     VYESNSFMLKAALHRLHFNEVKVYRVKDDLSCLSETLDEALHSTDIVFLTGGVSVGDY
                     DFVLRAAAECGVKTLFHKVRQRPGKPLYFGRKENKLVFGLPGNPSSVLTCFYEYVIPA
                     LELIIKQKNLIQVLHVQLARNYKKLKELTFFLKGLYDGNTAAPLDAQESYRLSSFAKA
                     NCLVRLEENVAEYREGEVVEVHLLPH"
     gene            complement(15902..16882)
                     /gene="moaA"
                     /locus_tag="VEV83_10925"
     CDS             complement(15902..16882)
                     /gene="moaA"
                     /locus_tag="VEV83_10925"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HYK45673.1"
                     /translation="MILDRFNRVHDYLRISLTDNCNLRCFYCMPEEDYVFTPASKLMQ
                     AGEIETLAKIFVREGVNKIRLTGGEPLVRKDAAEIIIRLSKLPVTLTLTTNGTRLDEF
                     LRILQEANISSINVSLDTLQPQKFQLLTRRDQFSKVFENIQLLINNGIHVKVNAVVMK
                     GLNEDEINDFIEWTRDVPVHVRFIEFMPFSGNHWKSDKVFTWKQILEEIEKKYSFMPL
                     RNEKHDTAKKYFVAGHAGTFAVITTMSSPFCGDCNRMRLTADGKMKNCLFSKEEIDLL
                     GALRRGEDVLPLIHASIKNKAKELGGQFTSNFEQLHAEDIHNRSMITIGG"
     gene            17112..18419
                     /locus_tag="VEV83_10930"
     CDS             17112..18419
                     /locus_tag="VEV83_10930"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45674.1"
                     /translation="MKKNFITLIVVVCLFGCKKNDQNPYRSANAASHVTATGGPNIIL
                     IVADDVGFEIPRCDGGESYQTPNLDSMATAGIRFTNCHGAPECSPSRFMILTGKYNFR
                     NYEKWGYMDPSEKTIGNMFRDAGYATCYAGKWQLMGAEASILSLGFDAYSVWNPDKRR
                     NAGSRYKSPVIYQGGTYLSDSVTYNKYADDWFTDYIFGFMDTVSKPFFVYYSMSLAHS
                     PFSPTPLDEAFTSWQPDGKSDPVFFPSMIQYMDKVIGEIMARVDSNTVVIFVGDNGSA
                     KEITSIWNGTSIQGGKSTTTIYGTHVPLIVYKKGSSGYTDSSLVDFTDFLPTLASTAN
                     IPLPAYGILDGTPFYPQKSTRQWIFCHYEPYPGTKDGVLMRWVQDGTYKRYDSWGTDK
                     TKLDKFYNIASDPYELHPISAKKRTNHEKSVNNTFKDVLLKMQ"
     gene            complement(18430..20157)
                     /locus_tag="VEV83_10935"
     CDS             complement(18430..20157)
                     /locus_tag="VEV83_10935"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HYK45675.1"
                     /translation="MAEKILMPRLSDTMTEGVIAAWHKNVGDPVKKGDLLAEIETDKA
                     TMELESYQNGVLLHRGAEQGGKLQVNDLLAIIGDKNEDISPLLKDGSNGAVKADTKKE
                     APKEPKEKAKKQETAKPATSNQQAETIDISHMDEVVLMPRLSDTMTEGVIASWQKKVG
                     DDVKKGDILAEIETDKATMELESYKDGKLLYQGAKEGEKIAVNDLLAIIGKEGFDVNK
                     VLTGLKAGAGKQEPVAKDEQDKQKAEGDVSETASSGVPQQSTEKQSQPEPEIVNEGRI
                     FASPLAKKLAAEKGVDLRYVKGTGDNGRITKTDIDNFTPAAKQEEPVPVEKKDEGAAT
                     KPAAAPLAPAAAAGQVSFEEVPVSQMRKTIARRLAESKFTAPHFYLTMSIDMDACVAA
                     RGKLNEISPVKISFNDIVLKAVAVALKQHPKVNSSWLGEKIRINHHVNIGVAVAVEEG
                     LLVPVIRFADTKSLSQIASEVKTFAQKAKDKKLQPADWEGSTFTISNLGMFGIEEFTA
                     IINPPDACILAIGGIAQVPVVKNNAIVPGNVMKVTLSCDHRVVDGATGSAFLQTLKGL
                     LEEPLRMMI"
     gene            20259..23129
                     /gene="polA"
                     /locus_tag="VEV83_10940"
     CDS             20259..23129
                     /gene="polA"
                     /locus_tag="VEV83_10940"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HYK45676.1"
                     /translation="MSNPQSATGNTKSDYLSTMDKRLFLLDAYALIFRAYYALIRNPR
                     FTSKGRNTNAQFGFTNTLMDLINKERPTHLAVCFDVEGRTERHSDFAEYKANRQETPE
                     DLLEAIPDIKRILEGFNIPCMGLEGYEADDVIGTLAWQANDAGYEVYMVTPDKDFGQL
                     VRDGIKIYKPGYQGGIAEILGPKEVCAKWDIERVDQVIDILSLMGDSIDNIPGIPGIG
                     EKTASKLLKEHGSLENILANAENIKGALGEKIKKGKESAVLSKKLATIVTNVPVQFHE
                     ENFCLKEWNKPALIEVFTELEFKSLGKRVLGDEFNVFQSAPVGVQTDMFAPPVANGKP
                     KIQATEDEAEVEALGLSASKNINNTEHNYLLVDTHEKIRALVGTLMQQTEICFDTETT
                     GNDANDAELLGLSFSYKPGEAYFVTCTTDYADTCNLLSLLDPVFENPALTWVGHNIKY
                     DLLVLKWYNREIKGQVYDTMLVQYVIEPDMKRPIDQLSAQYLGYEPIAIEEMIGKGRA
                     QTSMRSVEIEKIKDYSAEDVDITLQLKHALHPLLKTKDVERVFYEVENPLVKVLTDME
                     YEGVMVDVAFLANYSKELEREAYQAEQAVFAGAGVKFLLSSPKQLGEVLFEKLKLNPV
                     AKKTKSGQYATGEDVLLKLAQSNPIVEDILIYRELTKLKSTYVDALPLLINKKTGRVH
                     TTFAQAVAVTGRLSSNNPNLQNIPIRTERGKEIRKAFIPRDGNVIISADYSQIELRIV
                     AGISGDENMCAAFKSNIDIHTATAAKVYGIAPEEVTKVQRYKAKSVNFGIIYGQGAFG
                     LADNLGISRAEAKQIIDNYKKEFSGIARYMDNTINFCREHGYVQTLIGRKRWLKDINS
                     SNFTVRSFAERNAINSPIQGTAADMIKMAMIKIHDAMQKEKLKSKMILQVHDELVFDA
                     VKEELDVLQPLILNNMKNAMALPCGVPVEADLGVGDNWLEAH"
     gene            23182..23385
                     /locus_tag="VEV83_10945"
     CDS             23182..23385
                     /locus_tag="VEV83_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45677.1"
                     /translation="MKLTIAIARGEEFYIGTIKEIPAVGTQGSTIDETRENVLDALSL
                     YLNSMQETNTLTNTVLEEDLILG"
     gene            23600..24265
                     /locus_tag="VEV83_10950"
     CDS             23600..24265
                     /locus_tag="VEV83_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HYK45678.1"
                     /translation="MFADQILNFLFTVKLPFDLPNNIQVLDAHQRKDVRAVCTSFYKK
                     YYSDKNKRRLLVGINPGRFGGGTTGIPFTDPIRLEKVCGIKNDFQKKQELSSVFIYNM
                     IKAFGTVEDFYNQFYFSAVSPLGFVKDGKNLNYYDDKDLLQSIQPFIIDCMNRQLAFG
                     IDADVCFCIGEGENLKYLQKLNAQQNWFKKIQPLPHPRFIMQYRLKKKQEYIQQYVDL
                     LAC"
     gene            complement(24262..24564)
                     /locus_tag="VEV83_10955"
     CDS             complement(24262..24564)
                     /locus_tag="VEV83_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45679.1"
                     /translation="MDDRDNKSPQILNSASNFLGFCFLVLTSLRFFKVTDTSFIDEIT
                     MGCFVIFMFSCLCAFLSIRSKTNRSFIYETLAEFSFLAGLVVIFLMTVLFMLRIIH"
     gene            24685..25548
                     /locus_tag="VEV83_10960"
     CDS             24685..25548
                     /locus_tag="VEV83_10960"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HYK45680.1"
                     /translation="MKKFCFFCLTLSTGMIVKGAPPLEKTLLWQITGPGISAPSYLFG
                     TIHLMCPGDIVVAPNLAEKFNSTQQLYLELDLDDPTVMLKTMQHIQMKNDTTLKDLLS
                     AADYDSLLVHFKKLTGMSLEMMTSMKPELIETLMYPALLGCDGAEAWEQKFLQMAKAN
                     QMEVKGLETVDDQLQIFDAIPYKTQAQELAQTFNNIDSIKQNFNAMLDLYKRKDLDAL
                     HAMMYEDEEFSQYDDLLLKNRNEKWIPLIIEQAKLKPTFIAVGAAHLGGDNGVIALLQ
                     KKGYTVQPVQY"
     gene            25721..26020
                     /locus_tag="VEV83_10965"
     CDS             25721..26020
                     /locus_tag="VEV83_10965"
                     /inference="COORDINATES: protein motif:HMM:NF024189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45681.1"
                     /translation="MKNLLVAASIVLTVLTLDSCAPGRYTVSAQPAVPVYERPMRPGA
                     DYVWVDGDWYWSGGRYVYRNGYWTRPKTHRVWVSGVWVRHSNGGYYWKKGYWAKQ"
     gene            complement(26084..27958)
                     /locus_tag="VEV83_10970"
     CDS             complement(26084..27958)
                     /locus_tag="VEV83_10970"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK45682.1"
                     /translation="MPIKKFLSTVFTMLLLCAALSAQNVDIYPTHWWVGMKWNKLQLL
                     MRSTDDNFSKQTVTINYPGVAVTGTHKFENGKYLAVDVNIASTAKPGNVSIHFSSGNN
                     VTWELKARRKGNGTSYAQGVTSADLIYLIMPDRFSNGDPSNDKFNDMKDTSSDRNSPF
                     LRHGGDLQGITNHLDYFNDLGVTALWLTPVVENDMGLTSENGTMRSTYHGYAFTDQYK
                     IDKRFGGNEAYKQMVDAAHARHIKVIQDAVYNHFGDQHFLFADPPSKDWFNQWPVYTN
                     TTYKDQPLVDRYASKSDYDISVKGWFTRFMPDVNQQNPYMANYLIQYALWAVEEFGID
                     GWRVDTYFYSDRDFLNKVNEALYREFPNVTIFGETSMQSVVEQAYYMQNNIDTKWKSN
                     LQGVTDFEWQRSALAGVKDTMTWNGGINRFYNTLIQDILYKDPMRNEIFLDNHDLDRF
                     YSVVGEDYNKYKQAMILLLTQRGIPQIYYGTEILMKNFKNPTDAEVRKDFPGGWPGDP
                     ENKFVASGRTAAENDAYNFVKALAQFRLRSSAIKTGKFMQYVPVKGVYVYFRYDDKQT
                     IMCVINTSVSEQAIDFSKYSERTGGFNRAVNVFDQTSVNTSGLINIGAQQSIVWQLEK
                     "
     gene            complement(27999..>29286)
                     /locus_tag="VEV83_10975"
     CDS             complement(27999..>29286)
                     /locus_tag="VEV83_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45683.1"
                     /translation="GFALQNANVSRIFQTLGADLDKIAILWIAAPVTGLLVQPIIGYL
                     SDRTWHPYWGRRRPFFFTGAILASIALFLMPNSAALWMAAMLLWIMDASINISMEPFR
                     AFVGDKLPSSQRTAGFAMQTFFIGLGAVIASLLPYIFTNLFGISNTAAKGVIPNSVKY
                     SFYIGGFVFLAAVMWTVFTTKEFPPEDIKKWEEEKLKSRGFAQGFMEIVRGIGSMPKT
                     MLQLAVVQFFTWLAFFSMWIYTTAGVAQNVYHTTDTTSKSFQDAGDWVGVMFMVYNGV
                     SALSAFLLPMLAAKISRRFTHLICLILGGAGLISLFFIKDHQTLLVSMAFVGVAWAST
                     LTMPYAILAGALPASKMGFYMGVFNFFIVIPQILAAAILGFFVRNVFNDESIYALLVG
                     GISMIIGGFMNFMVREKKHETAAEIISDVEALRLSE"
BASE COUNT         8303 a         6620 c         6304 g         8059 t
ORIGIN      
        1 cggcttcttc aggtttgttt ggaaaagcat gctggctggt attttaaaaa cgatcggcgt
       61 accgcagaaa tatatgaagc aaagttagtt catgtgcaac tttcggcggc atgatccaca
      121 gaggtcaccg cccgcatgat cgattgttga tggatttatt tgcatctgtc atccaactct
      181 ctttcgatta caagaaccat caataaaaaa tatcctgctg taagttttac actatttatt
      241 taatctctct aaattgtaac cgtatgtccg cataaaaaat aaccgttgtt gagaaataca
      301 ttattgatag cctttttgct tgtatacatt ccgctaacgg cacaaaaaaa gaacagcgca
      361 taccaactgc atattcatcg aacgcactcg gaaataaata tcgacggtgc aatggacgat
      421 agcgcctggc agcatgcgga gtcagccagt aattttttta tggtactgcc catggataca
      481 agccatgctc aagtgcccac cgaagtaaaa atgagctatg acgaaaacaa tctttacatc
      541 atcgcgatct gctatctcgc gactccccat ccttacatgg ttgaatcgct gcgtcgtgat
      601 tttgtattcg gtaagaatga caatttcatt ttttttatcg acccttttga cgatcgtaca
      661 aacggcttca cgttcggcgc caatgcagcc ggcgcacagt gggacggcat gctttacgaa
      721 ggtggcagcg cagacctgag ctgggataac aaatggatat cagccgtaaa aaattatcct
      781 gacaaatgga tattcgaagc gtctattccc tttaaaacaa ttcgctacaa aaaggggatc
      841 accacatggg gcataaattt tagcaggctt gatattacag ccgcggaaaa atctgcgtgg
      901 gctcccgtgc cgcgccaatt tcctaccgca gcgcttgcat acacgggcac actggtatgg
      961 gatgaagcgc ctccgcaaat tccttcgaat atttcattga tcccttatgc gctcggcggc
     1021 gtaagcaaag attacgagaa caaaaaatcc gccgtctaca gaaaagatgt cggaggcgat
     1081 gcgaagatcg ccattacgtc gtcattgaat cttgacctga ctgtcaaccc ggatttttcg
     1141 caggttgaag ttgacaaaca ggtaacgaac cttgaccgct atgaattatt ctttcctgaa
     1201 aaacgccaat tctttttaga aaatgccgac ctgttctcaa attttggcta cgcgaatatc
     1261 cgcccgtttt tttcgaggag aattgggttg aatacaccga tcgattttgg cgcgcgcctt
     1321 agcgggagca ttaataagaa ctggcgcatc ggggcaatgg acatgcaaac aagacacgat
     1381 gacgcgaccg ggttgcctac acaaaatttc gcagtgctgg cactacagag acgcgtgttc
     1441 tcgcgttcga acatcaggtt catgtttgta aacaagcagt cactcaatta cgatccggaa
     1501 aaagaagaca gtacaaagcc tgagtattca caatacaatc gcaatcttgg gatcgaatac
     1561 aatctcgcgt cggcagataa tttgtggaaa gggaaagcgc tgttgttgaa atcttttagc
     1621 cctggtatac atgacagcga ttttgtgcaa gccgcaaatc tgcaatacaa cagtaagaag
     1681 tggctgatct cctgggcgca tgagatcgtg gggaaagatt atgtcgcgga ggtcggttat
     1741 gttccaagga aaaattacat caagctaaac ccatcgatcg gctatttatt ttttccaaaa
     1801 ggcggaagta tattaagtca cggtccaaag ataaattcca cttatttttt cgaccacgat
     1861 tttcatcaaa cggataacga aacatatgcg ttgtatgctt taaactttcg ggaccagagc
     1921 acgacggatg ggtggatatc gcacgattat gtgcaattgc tgcaaccttt cgatcctaca
     1981 aactcgggca aagacagttt gccgcagggt actaaacacc ggtggaacgc gttcggtctc
     2041 gagtactttt caaagccaca acatcttttt acttattctt tttccacgcg gtacggcggg
     2101 tactatgctg acggaacccg cttaagtctt acagcggagg cgggatatcg tttccagcct
     2161 tacgtgagta ttttagtaga tgcgagttac aatcacattg aattgccgga cccatggggg
     2221 ctgaacgatt tttggctgat tggtcccaga gttgacgtca cttttacaaa cacattattt
     2281 ttcacaacgt ttattcaata taataaccag ctaaaaaata tcaatctcaa tacgcggttt
     2341 caatggagat atgcaccggc ctcagatctt ttccttgtgt acacagacaa ttatttctcc
     2401 acgccgcttg cagttcgcaa tcgcgcattt gtactaaagt ttacttattg gtggaatttg
     2461 tgagggcgaa gactagaaaa cgggccttag cagaaaagca tcgtcttaaa aaagcgatgc
     2521 taaaatataa accagcctgt attatgatta gatgttgctg ggaagtacaa cgtatccgtt
     2581 ttttaaactg aagaactcac ggatcgctag taaaacattt ttcatacaat ttattttttg
     2641 ttgttcaagt atgtatgata gatgtaactg gaagaaaaag atttaatgtg cgttttgtaa
     2701 agtgatgtta aacagcgttt ggatggaaaa gtgagttgtc gtgctatttg gcttcatggg
     2761 aaacgaatac taactgcgca cgtgatcttt aacttcgata ggaaggataa ctacaactgt
     2821 atcgacagtt cttgggtgcg ctcttcctcc aataatccat agcggttcat ttgtttatgc
     2881 atcacgtaga accatgcagg aggaaacaaa gcaagaatga tcatgccggg gtaaccggta
     2941 ggcatctgtg gtgcattttc atgacgcctc aggacctggt attttcttga tgcaacatag
     3001 tgatgatcgc tgtggcggct gagttcgaac agcattaaac ggccgatgat atgatcacta
     3061 ttccagctat ggtgaggcat cgccctttca tattttccag gggcgatctt tttgcgtgtt
     3121 aagccgtaat gctcgatgta attcacggtt tcaagcaata agatcccaat caatgcagct
     3181 gctaaataat ataatgtaat gcgccatcca aacagcataa aaattatggc aacaaatgcg
     3241 gcctggatga tgtgcatttg gatcatctca tttgaaaaag ctatcacgcg ccgctttctt
     3301 ctgaatacct ctttgttggc tattctccac gcatgtatat aactgaaaaa aatcgttcgc
     3361 aggtaaaaca tataaacagg ctcattcagt cgcgcgctgc caggatcttc ttcggtagca
     3421 acatttttat gatggccctt gttatgctcg ataaaaaaat gcatatacaa actaaccagt
     3481 aacgatgttt tcgcaagtct ttgttcaaac ctgtttaccc ggtggcctaa ctcgtggccg
     3541 acattgatcc cgaacgcgcc gcacagcaac cccatcgttg cgatccgggc gacgagatcg
     3601 gaactagaaa ggctttcgtt cattgaaaat aaaaacaacg ccagcatagg gtaaagaagg
     3661 atcacggcaa cgtaaagcat ccagtcatat actttatcct tttttgcaag ctcttcttct
     3721 gcggcggtca tattcttctc atcgggcttc aagaaaagct ccgcaacagg tatcatcacc
     3781 caggcgtata ttaaaccaaa ccagcaatag ataccatgct gtgtaaacgc gacagccgcg
     3841 agggcataca ccaatagcgg tgtgacgtac tttaatgaac gggcatgcat gttagagata
     3901 tgagcggaaa acggtacgaa agatataaaa ttttctctgc ctaaaatttt catcattaaa
     3961 ctgccgttaa atatatgggt ctatccccca aaacgacaag gtggccgcat cacaacagcg
     4021 aaaaaatcag catttactat ggcgagctgg ttttggcgtg aataccgaga ccgtaaaaga
     4081 tattgctgtt gctcctccgg aagtgctcta tacaatgctg gaaaccgcgt catcatccag
     4141 accggcatat atcgacgtag cggataatac gcttaaaggc ctgatgatgg gaattcaaca
     4201 ggttgctgaa ttgcagcagg cggagaagcc gatgaccgac gaacaaagga aaaaatttaa
     4261 aaaagagagc atacagaaca tccgtaccct aaatacttca tggctaaatg agatggtcga
     4321 aactgatgcg caactgagag aaaagatggc gttgttctgg catggacact ttgcatgccg
     4381 taacctcaat attttctatc agcagttatt gctggatgaa atacgaacga acgctcttac
     4441 aaacttccgc gatttattga aaggcgtcag taaatcagcg gcgatgctga attttttgaa
     4501 taaccagcaa aatcaaaaaa agcatccgaa cgaaaacttt gcaagggaag taatggaact
     4561 gttcacactg ggcaggggaa attatagcga gcaggacgta aaggaggccg caagggcatt
     4621 taccgggtgg agcgcaaaat ttaatggcga ctttttgttt cgtccgttca ttcatgacga
     4681 tggtgagaaa acattcttgg gaaagaccgg caatttttcg ggagacgata ttgtgcaaat
     4741 attgcttgaa caaaaacaaa cggcaaagtt catcaccact aagatctacc gatattttgt
     4801 gaacgatgtg gtcgatgagg aactctgtaa cgaccttgct gacgcttttt atcaaagcaa
     4861 ttatgatatt aagacgttga tgaaaaatat tttcaccagt gactggtttt acgatgaaaa
     4921 aaatattggc tgcaggatca aatcacccgt cgaattactt gtcggtataa ggcggatctt
     4981 gccaatgcaa ctcgaaaatg aaggcattca aatcctgttg caacgcgcac tcggacaaat
     5041 cctgttctat ccgcctaatg tggccgggtg gccgggcgga aaaacatgga tcgatagttc
     5101 tactcttatg ctccgccttc gaatgccgca gttgatcaaa gaggacgaca cggtttatat
     5161 tacaccaaaa caagacgacg acgttcaaat gggcatgcag aataatgacg cgtcgaacga
     5221 cagaaagaat ttccgcagcg atgggtttaa gatcaccgca agtattgact gggataaata
     5281 catccggcaa ttcgacgagg taaacgacaa agagctttac gacgccatcg aagcggttgt
     5341 ccttcaaacg aacaaaggaa gcgtaagcaa gtcggtgatt gaatccaatg tacagtcaaa
     5401 aaacaaggaa gaatatatta aatcaacgac gatatcattg atgagcacgc cggaatatca
     5461 attgtgttaa ttagaaattc aaagtgtttg ctatcacagt tggttcttcg ttcttgcttc
     5521 ttggttcttg gttctcggtt cttagttctt ttttcttgat tcttggttct tggttcttgg
     5581 ttcttttttc ttgattcttg gttcttgatt ttttggttct tggttcttat tttcttacct
     5641 ttttatgctg ataaaacgca gacaattttt acaaacaggg acgctggcta ccgcgtcttt
     5701 catggtgccc aaatttttaa aggcatttga aacgcgcgag tttgcaatgg tgccaccggg
     5761 caataaaatc gtcgtcgttc tgcaactgag cggcggcaac gacggtttga atacggtaat
     5821 accagtacga aatgacatat actataaatc gaggccggct ttaggtataa acaaagagaa
     5881 gaccttgttg cttaccgatg aagcaggatt acatcctcaa ctcacggcat tcaaggaaat
     5941 gtttgatgat ggaagccttg gcattttaaa cagcataggc tatccaaatc ccgacagaag
     6001 tcatttccgc agcatggata tctggcaaac cgccagcgca agtaacgagt ttattacaac
     6061 cggttgggtt ggccgttacc ttgatgcccg gtgcaatgga tgcggcgaac caacgcaggc
     6121 gctcgaactg gacgatatct taagcttggc gctgaaaggt gaaaaagaaa agggcattgc
     6181 atttaaagac ccacggcgat tatacaacac gagtcatgaa aattatttca gccaattggc
     6241 cgctcaacat catgccgaag aatatgaacg accagtcgac tacctgtaca agacgatggc
     6301 agaaacttta agcagcgcca attacattta cgaacaaagc cggctgcgtc caacaaaagc
     6361 agattatccg cagaccgagc tgggcaatca tctaaaaacg atcgcatcgc tgatcctttc
     6421 agacatcaac acaaagatct attatgtaag tctcgggagc tttgatacac acgtatttca
     6481 acagaatacg caacagcgat tattcaaaca actgaatgac gccgtaagtg cattcgtaaa
     6541 agatatgaag agcaacagtc gctttgatga tgtgctctta ttcactttca gcgaatttgg
     6601 caggcgggtt tcgcagaacg caagtggagg taccgatcat ggaactgcca acaatatgtt
     6661 cctggtgagc ggcggtttga aagaaaaagg tttgatcaat gaattgcctg acctcgatga
     6721 tcttgatgaa ggagatctga aatacaagat cgattttaaa aacgtatatg caaccgtttt
     6781 aaataaatgg ctgcaggctg atgataaagt gatccttgaa aagaactttg atcttctttc
     6841 gttcatttaa caacacaatt cggccctaaa cttttttttc acagcaacga ttacaattaa
     6901 ttttgtggtg cgtttcagat cgctttgggg cgaacagtat tcgtcttgct ccacagacaa
     6961 catgcggctg tcattcgaat aaagcgagga aactgctacg caaaaaatca tgttgcaact
     7021 tccagtatac ctcgataaca atgccacaac gcaatgcgat ccccgcgttg ttgaagcgat
     7081 gttgccgtac ttcggagaaa aattcggtaa tgccgcaagt aaaagtcatt cgtttggctg
     7141 gatcgcggaa gaagctgtgg agaatgcgcg tgaacagttg gctgaactga tcaatgcgca
     7201 tccaaaagaa atcgttttta cctcgggcgc gactgaatcc gataaccttg caatcaaggg
     7261 cgcatttgag atgtattcct cgaagggaaa tcatattatc acggctgcaa cagagcacaa
     7321 agccgtgctc gatacctgta agcatattga aaagttgggc ggcgaaataa cctatttacc
     7381 tgtagatagc gatggacgca tcagggttgc tgaactggaa gcttcgatca ggccgtccac
     7441 aattttgatc gccatcatgt atgcgaacaa tgagatcggc actatacaac cagttcgcga
     7501 aattgcttca gttgcaaaaa agcacgatgt gctatttttt tgcgatgcag cacaggcggt
     7561 cggtaaaatt cgcgttgatg tgatcgcaga cggaattgac ctgctcgctt ttaccgcaca
     7621 caagatgtat ggcccaaaag gtataggcgc attatatgtt cggcggaaag atccaagggt
     7681 aaggttaaca gcccaggtgg atggaggcgg acacgaaaga ggaatgcgca gcggcacgct
     7741 gaatgtgccg gcaattgttg gatttggaaa agcgtgtgaa ttatgtacga ctgaaatgaa
     7801 ccaggataca aaacgcctgt tggctttaag aaacaaactt gagaacgcgc tggtttttct
     7861 aaatgacgtg tcggtaaatg gaagccctga gcaccggttg ccgcatacca ccaatttatc
     7921 ttttaaggaa gtatccgcgg aacgattgat gatgacgttt aaccgcaata ttgccgtatc
     7981 atcgggttct gcatgcactt cagcattagt tgaaccgtct tacgtattaa aagcattagg
     8041 gcttcctgat gatcttgccc gctcgtcgct tcgatttggc cttggacgtt ttacaaccga
     8101 agagcagatc gattatgtaa ttgaagaagt tgcaaaaaat ttggccaggc tcaaaggaac
     8161 gcaagttgtg aaaggtcatt aaaacgttcc actcaaaagc atcacaatct tattctgtat
     8221 gatgcattca atttaatgaa caggcgatcg ttccacttat aatcaaccac ataattttta
     8281 ttgcgttcaa cgccgcttct caattttcta aaaattccgt atcccggttc aaccgtgaat
     8341 atgatgtgtt ttgaaacgta ataagtgcga tcacttacga cgaaaaagct ggagcacgaa
     8401 gggcaccacg aaccacaata gccacgacga agatcaccag ggaaaacaag attgatcgtt
     8461 gtgttcattg tgcatgcgtt gtgttcttcg tgctccaaaa aaacatcatc agattaagat
     8521 atcgaaaagc atttttttag tttttgattg atatcaaaca ttcatcaacc ttaatgattt
     8581 cctgaacatg ctgcacttat aagaagaagg ctggagcacg aagggcagca cggacccaca
     8641 acggccacga cgatgatcac gggtaaaaca aaattgaatc tttgtgttcc ttgtgcatgc
     8701 tttgtgttct tcgtgctcca aaaaaaagtt tataaagaac ggcacaacat tatttcacga
     8761 tcgcaaactt atttttttca gtgatgcctg gccagtcatc cgttctgaac ggacccgccg
     8821 gaaaaccttc tttgttgaac aagttatcag cacccgcgtc atccatccat ccaaaacgaa
     8881 cggcaacagg agcagtcaca ttttcattcg aaacaacaac atgatctccg tctatcgttg
     8941 tagtcgcagc ataaaatttc ttatcggcac cggcaacttc aaatcccttc aaatcgccat
     9001 tctttgccat caaaccgccg ccaatatttt taaaataaat tttcacttta ttgccgtcga
     9061 tcttcatcga ctcatacata gggccgctgt aaacaacatc cttgtcatac acattgtgca
     9121 aagcgatcgc tgcaagtcgc ttccccacat cctgtttatt ttttggatgg atatcttttg
     9181 aattaccaat atcggttgtg accgccatac cggtgtttgg caaggacaag gcgattgttt
     9241 gtgcttcacg caactccgcc caggaactgc cttttgcact gttgccattg tcggcgttcc
     9301 agcttgcaag ctgaacgaaa taaaaaggaa aattaccctg ctgccaatgt ttccgccaat
     9361 cagtgatcat taaaggaaat gctttacgat attgatacgc acggccggca tttgcttcgc
     9421 cctggtacca gatcacgcct tcaatggcat aaggaattaa cggattcacc atcgcgttaa
     9481 ataataaagt tggatactcg ttcggaccaa ccgatgatgc attcccttca acagattcaa
     9541 cgtggaaccg ccaatcgcct gcaagagaaa ttacatgatc ccctatcgtc aatctcatgt
     9601 cgcccggttc accgtaaatt cccccgccgc cacccgtatc ctcaacgcga accgcgataa
     9661 caatttttcc ggcgctaaag ggcccaaacg gtataggata ctttctgtgg gcgttgtaag
     9721 aatttgttct tcccacttca atcccattca catacgttat atcattatca tcgatcattg
     9781 cgagttcaag agttcctggt ttacctgtat cggcggcgga gatctctatt gtttttcgaa
     9841 accatactac cccgtcgagt tcgcccaatt gcttttcttc ccacaatgaa ggcaattgca
     9901 tttgcggcca tttattgtca tcaaaatcaa cattcttcca ggttgccact tcacttgcgt
     9961 ttggcaatga tccctgaagt tcgttcattc gtttttccat agcggctcga cgaattttgg
    10021 ctaatgaatc aaggtcgagt gccggcatgt cggcgatcat cgatttaaat tcatcactgt
    10081 tctcaaacgc ttcacggctt gtccatgttt ccacatgcgt gcctccccat gaagtattaa
    10141 taagcccgat tggaattttt aattgattat ataattcacg cgcaaaaaaa tagcccgttg
    10201 ctgtgaaatc accagccgtc tgcggattgc aaatctccca ttcaccgctt ttaatatcgt
    10261 cttttggaac ggaagcaact gtatttggaa ttttgatatg acgtatctgc ggataatttg
    10321 cgtctttgat ctcctgctca taattgttaa cctttcccca gccttcgatc ggcatttcca
    10381 tattcgactg tccgctgcaa acccacactt caccaaccag tacatttttg aatgttacat
    10441 tattttttcc ttcaacgatc agctgatacg gcccgcctgc tttttcggga tcgagttttg
    10501 ttatccattt gccgttgtta tccgccgtca ccgattttgt ttgctggtta aattttatcg
    10561 tgagcttttc atttgcatcg gcccaacccc aaaccgggat tggcttattg cgctgcaata
    10621 ccatattgtc gccgaaaatt tttggaaggc taacatttgc aatgacatgg aaacaagaaa
    10681 tgagcaacag gccaagcgat aggatttttt tcatgatgca agtttaataa tggctaagat
    10741 aatttgggat tttgtaagtg caatcattat ttgcaacctg tggcgaggtc ggcaagattt
    10801 gaataattca acggacaata gctggcgttg gatatctgca tttaaacacg aaggctttac
    10861 accaaatgca attcgaaaaa ggagagacat aagaacggca gcaaggttta ttatctcgaa
    10921 gctgcaatcg ctctttattt attctgcaac cctccggggt tggcatcgcg gcgcagggca
    10981 cgttgccgca gctttcacct gtggttatta acattaaacc ccgttgggtt tcgcagccat
    11041 gaggaaattt accgcgtttc ggtcgccaat ttctacgacc agataataac ttttttgcat
    11101 cgaccaccaa tttaatggaa catgatctta aacgggaaaa aagaaaaccc gcaacatcgc
    11161 aatagcaaag cccgaagggc ttcaatccga ataaccccgg attgaatccg gggaaaaacg
    11221 tataaatgaa ataacaaccc cgacagggtt gaattgaaat tcttggactt taccgcacca
    11281 aaacagattt cgattgataa tgcctgcttg taaccaatga tattggaagc ccgatacaaa
    11341 tcatgaggat cgcagcagcc cttatcgcag acggccatgc aaatggcgca tgatatgcat
    11401 tcgacattgg aacgacgata aaattcatca ccgcccacac aaaagttcca tacaatagac
    11461 cgctgatgat tttttgtttg cgtaaaaaag gtatatgtgg atagacaaga aaatatccaa
    11521 tagcaaaaca aaaagcgatg aagtaatgaa aggcaagccc gatcaaagcc atcgtcgttg
    11581 aattacccac cgtatttttt ccaaacacgc ccgcggcaat accgtgcagt atttgtacag
    11641 cagtcacttt ttgcataatg accgaataca caagaatggc ggcgagcatg tccaaagtgc
    11701 ctgcaataaa accggagagc aagatcgttt tggcagcgga agcagacgtg cgcgggatcg
    11761 gagaaacggc agtagacatc cttttggttt atgacaatga atgctacact agtgttgcat
    11821 gccctgcact acctggaaca cgtgaaggat gtacggaaac aatgcgtcca ttgtttcggt
    11881 tgcaccttgc gatgaacccg gtaacgtaag caccagtgta ttttttatga acccagccac
    11941 accacgcgaa agcatcgcgt atggcatccg ttgctggcca taattacgcg ctgcctccat
    12001 cactcccgga atctctttgc taagcagtgg acggatcgca tccggtgtaa cgtcgcgtgg
    12061 tgaaagcccg gtaccgcctg taaagatcac cagcgcatag tttgcatcgc tgaactgttt
    12121 cgctttgtcc tggatcactt caaactcgtc ggcaatgatt tcataattcg ttaccgcaat
    12181 gccgaattct ttcaactttt cgcatatcgc tttaccggcg gtgtcatgtt tgatgccttt
    12241 cgaaacgctg tctgaacaca cgatcaccgc agacgttaat ttgtcggtca catcgtgcct
    12301 gaaatctctt ttgccgccgt gcttgctttc aagttttata gatgttatct caatcccgtt
    12361 gtcgatcggc tttagcatgt catatatggt gagggctgca atggcagcgc cgtgcatagc
    12421 ttcaacttcc acgcctgttt tgtaaatgct gcgcacctca accctgatca agatctgctg
    12481 atctgaaatg gtgtggaaga tcgcagcata ttcaatcggt aagggatggc aatccggaat
    12541 aacgtcactt gtttttttta tagcgagcaa tccggcggcc cgtgaaaact caaacacgtc
    12601 accttttggc actgttttat tcctgaccgc ctcaatggtt tcttcctttg acacatttat
    12661 caccgcagca gcgatcgcgg ttctcaagct gtttgattta tgtgttatat cgaccatgct
    12721 aaaaattctc tttccatttg tgagtttgtt tttgtccggc tactgcaaca aatatttctt
    12781 ttccccagat cggcaattct tttttgatcc tttccacgat ctctgaacag gcttctatcg
    12841 ccgcctttct atgggccgat gaagtaaaga caaacaggga aatttcgccg gctttcactg
    12901 tcccgaggct gtggtggaca tgcaggcatg tcaatgtata ttttcggaac atctcctcac
    12961 gaatctgatg catcttttca agcgccattg tctcataaga cgagtattct atcgccgcaa
    13021 cttgtttttc gtctattaca tcgcttctga cctgcccgag aaaaatagtg tgtgcaccga
    13081 tattcgtcat gctgctgtgc ttttcaatac ttgcagcaat aaaagatggg gatattggcc
    13141 cgtcggtaaa aatgtttttt aatttttttt ctgccactcc attcaaagtt atttgtttgt
    13201 ctttttccat tccgtaattc caccgcgaag actatatatt tttttttggt ctttagaact
    13261 atttctcaaa atatttactg cctcgaggct ccttttcccc gtttgacaaa agacaacgat
    13321 cgtgtcgccg ttcagcagag gctgatggga tctcaaatgt gacaatggta tctggaagtg
    13381 gtgaaattca tttaccgcag gcaattcacc atattcacgc acatcaacaa cggttgtgtc
    13441 atgctctttt aataggtcgt tgaacgtttc aatgtcgatc tcatcatcat tttccacagg
    13501 tgatgagcat agccattcgt aatcggtgtt tagaaattca ttttcatctt tcggaatgaa
    13561 agcatctact tcttcgttga ctgacacatt tacgacgtac gtgttatttg taagtgcatt
    13621 gtaggttaac aagcggtcgg tcaacgtttc acatatacct gtaatcaatt taattgtttc
    13681 gtttgcctgc atagtcccga ttatgcccgg caacactccc aacacgccgg cttccgcaca
    13741 gttcagcact tcattttctt tgggtggttg agggaaaaga tcgcgataat tgacaggcct
    13801 tgccgctctg ctgcaattaa agacagctac ctggccttcg aattgtgaaa cagcaccgta
    13861 gaccagcggt tttcgcagaa gcacacatgc atcgttgatc aaatagcggg aagcaaaatt
    13921 atctgtacca tcaattacaa tatcgtattc gcttataatg ccgagagcat tttcattggt
    13981 gattcgcgaa tttgcaaaaa tgatcttgat ttcaggattc agccgtttaa gtttcgatgc
    14041 ggcagtttga gctttcgcag aaccgatatc atccgtggaa aataagacct gcctgtgcag
    14101 attattcaat gaaacggcgt cgtcatccaa tattccaatt gtacctacac cagccgcggc
    14161 caggtactgc aacgcagcgc aacccaatcc acctgcaccg atcaccaaga cttttgactg
    14221 caagagtttt tgttgtcctt cttggccaaa ttcttttaat aggatttggc gctgatatct
    14281 ttcgtatgaa atttcatcag tcatttatcc tcccgaaaat ggcggcaata ttgcaatttc
    14341 agacccgtta atgatttcgg tgttcttgcg aatgatctgc ctgttcacag ccacagcgta
    14401 tttggcattt tgcagtgtgg gataaagaga atttaatttg ttgatcagtt gatcagtatc
    14461 tgcaacatcg atcacgaaat tcgaattgcc ggttatctcc gctatctgtc caaataccat
    14521 cacgtttacc tgcataactt ttttgatttg attctagtgc ggcaacaaat gaacttccac
    14581 cacctcccct tcgcggtatt ccgcgacgtt ctcttcaagc cgcacaaggc agtttgcttt
    14641 tgcgaacgag cttaagcgat aagattcctg tgcgtctaat ggagctgcgg tgttaccatc
    14701 atacaaccct tttaggaaaa atgttagctc tttcagtttt ttatagtttc gcgccaattg
    14761 aacgtgcagg acctgaatta aattcttctg ttttatgatc aactccagag ccggaataac
    14821 gtattcataa aaacaagtca gtaccgaaga tggatttccg ggcagcccga atacgagttt
    14881 gttttctttc cttccgaagt atagtggttt tcccggacgc tgtctaacct tgtgaaataa
    14941 tgtttttaca ccacattcgg cggccgcacg caaaacgaaa tcataatcac ccacgcttac
    15001 tcctccagtc aaaaacacaa tatcagtgga atgcaacgct tcatccaacg tttcactcag
    15061 gcacgagaga tcgtctttaa cgcgataaac tttcacctca ttaaaatgta atcgatggag
    15121 cgctgcttta agcatgaacg aatttgattc gtacacctgt ccgaattcca aaatatttcc
    15181 aggtgtttgc aactcgttgc cggtaacaat gatgcttatt gaaggtcttt cataaacagc
    15241 aacatgggtg actccaattc cagcgaaaaa tccaattgct gcgggcgaca agtaactgtc
    15301 ttttcccaat gccagttcgc cggcttttat ctccgatcct ttcggacgaa aatttccgcc
    15361 acgttgcaac atttcgtcgt tgatgatcag cttgccgtca tcgatcaatg ttttttcctg
    15421 catgaccacg gtgtccgcat tgcccgggat cgcagctcct gtgaatatcc gcgctgcgtg
    15481 tccatgcgaa accgaaaaat tttcatgtgc cccggcggcc atctcaccat atacgagcaa
    15541 tcgctcgcgc acatcgtcaa acgcaaatgc gtaaccatcg acggatgact gattgaacgc
    15601 cggaatatcc agtttcgaaa acacattttc cgcaagggta agaccaatcg cctcttcaag
    15661 cgccagaatc acaggctgcg atgcaaccgt attttcaaca acaatccttt tcgcttcgtt
    15721 taccgaaatc aagccaacac ccatgttccc tttcatgccc ccttcccctg aaggggagta
    15781 taaagcgtcg tttataaaat aatgtttcat cgatcttttt cttcttaccg ccttacctcc
    15841 tacttcttac ctcttacttc ctaattccta attcctactt cctaactcct acttccttcc
    15901 ctcatcctcc aatcgttatc atgctccggt tatgaatatc ttcagcatgg agctgctcaa
    15961 aatttgaggt gaactggccg cctaattctt tcgccttatt cttaatgctt gcatgaatga
    16021 gtgggagcac atcttctcct cttcttaatg caccgagcaa gtcaatttct tcttttgaga
    16081 aaaggcaatt cttcatcttt ccgtcggccg tcagccgcat ccggttgcag tcgccgcaaa
    16141 aaggagaact catggtggtg atcacagcaa aggttcccgc atgcccggct acaaaatatt
    16201 ttttcgctgt gtcgtgcttc tcatttcgca aaggcatgaa cgaatacttt ttttcaattt
    16261 cttcgagtat ctgcttccat gtaaaaactt tatcactctt ccagtgattc ccgctaaagg
    16321 gcatgaattc aataaagcgg acgtgcacgg gaacgtccct ggtccattca ataaaatcgt
    16381 tgatctcgtc ttcattcaat cctttcataa caacggcatt cacttttaca tggatcccgt
    16441 tgtttataag caattgaata ttttcaaaca cttttgaaaa ttgatcccgc cgtgtgagca
    16501 gttgaaattt ttgcggttgc agggtatcaa ggctcacatt tatggaagag atatttgcct
    16561 cctgcaaaat gcggagaaat tcatcaagcc tggttccgtt ggtcgtgagc gttaatgtta
    16621 caggtaattt agataagcgg ataatgattt cggcggcatc tttacgcact aacggctcac
    16681 cacccgtcag tcttatttta ttcacacctt cccttacaaa tatttttgcg agcgtctcaa
    16741 tttcgcctgc ctgcataagc tttgatgccg gcgtaaaaac gtagtcctct tcaggcatac
    16801 aataaaaaca tcgcaggttg cagttatccg ttagtgagat ccgcaaataa tcatgcacac
    16861 gattgaaccg gtcgaggatc atgcaaaaga attagtgatg caatgtacgc atcgctgaag
    16921 attattacat tagaaatgcc gttcagttgt agttaaaaaa ttatccaatg gcttcttaag
    16981 ggcggctgct gatgtcgcgc gtgctcaaaa aaacaaattt ttttttccgc tgcctccaac
    17041 gtaaaattgt gaaagctacc tattgaagat gatcattacc tgtcaccttc cctcgtccgt
    17101 aaaactttca tatgaaaaaa aatttcataa cgcttattgt cgtcgtgtgt ttattcggat
    17161 gcaaaaaaaa cgaccagaat ccttatcgct cagcaaatgc tgcgtctcat gtcaccgcta
    17221 cgggtggacc gaacattatt cttattgttg ctgacgatgt aggattcgag ataccacgtt
    17281 gcgacggcgg agaatcttat caaacaccga acctggattc aatggcaact gcaggtatac
    17341 gctttacaaa ttgtcatggc gcgcccgaat gttctccgtc acggtttatg atcttaacgg
    17401 gcaagtacaa tttccgaaac tatgaaaagt ggggttatat ggacccttct gaaaaaacga
    17461 ttggcaacat gttcagagac gcgggatatg caacttgtta tgcgggcaaa tggcagctca
    17521 tgggtgcaga agcctcaata ctttcccttg gctttgacgc gtattctgtt tggaaccctg
    17581 ataaacgccg gaacgcaggt agccggtaca aaagtcctgt tatctaccag ggcggaacat
    17641 atttgtcgga cagcgtaacg tacaacaaat atgctgatga ctggtttacc gattacattt
    17701 ttggttttat ggataccgtt tccaaaccgt tttttgtgta ctactctatg agccttgcac
    17761 attcaccttt ttcgccgacg ccgcttgatg aagcatttac gagttggcaa cctgacggca
    17821 aaagtgatcc tgttttcttt ccgtcgatga tacaatatat ggacaaggtt ataggcgaaa
    17881 taatggcacg cgtcgatagt aataccgtgg taatatttgt tggcgataat gggtcggcga
    17941 aagagatcac ttcaatatgg aacggcacat cgatacaggg tgggaaaagt acaacaacca
    18001 tttacggaac acacgtgccc ctcatcgttt acaaaaaagg atccagcggt tacacagatt
    18061 cttcattggt agattttaca gatttcctgc cgacgttagc ttcaactgcg aatattccat
    18121 tacctgcata tggaatactc gatggcactc ctttttaccc gcagaaaagc acaaggcaat
    18181 ggatattttg ccactatgaa ccctatcccg gcacgaagga cggcgtactt atgcgttggg
    18241 tgcaggatgg tacttacaaa cgctacgatt catgggggac agacaaaaca aaactggata
    18301 agttttacaa tattgcttcg gacccatacg agttacatcc catatcagcg aaaaagcgaa
    18361 ccaatcacga aaaatctgtc aacaacacat ttaaggacgt actgctaaag atgcaataga
    18421 aagctggggc tatatcatca ttcttaaggg ctcttcaagc aagcctttca gcgtttggag
    18481 aaatgctgaa ccagttgctc catctaccac acggtgatcg cagctgagtg ttactttcat
    18541 cacgttgcca ggaacgatcg cattattttt tacgaccgga acttgtgcaa taccacctat
    18601 cgcgagaata cacgcgtcag gcggattgat gatagcggtg aattcttcaa tcccaaacat
    18661 tccgagattc gaaatagtaa atgtgcttcc ttcccagtct gccggctgca attttttatc
    18721 ctttgctttt tgcgcaaatg tttttacttc tgaagcgatc tggcttaacg attttgtatc
    18781 agcgaaacga atcacgggca cgagcaatcc ttcctctacc gcaacagcaa caccgatgtt
    18841 tacatgatgg ttaatgcgga tcttttcgcc cagccaactg ctgttcactt taggatgttg
    18901 tttcaacgcc acagccactg ccttcaaaac gatatcatta aagctgatct taacaggact
    18961 gatttcattc aatttgccgc gagctgcgac acacgcatcc atgtctatgc tcattgtaag
    19021 gtagaaatgc ggtgcagtga atttgctttc ggcaagcctg cgcgcgatcg ttttgcgcat
    19081 ctgtgaaacg ggtacttctt caaagctgac ttgccctgcg gccgcggccg gagcaagagg
    19141 cgcggcggct ggtttagtcg cggcgccttc gtccttcttt tcaaccggca ccggctcttc
    19201 ctgcttcgct gccggcgtga aattatctat gtcagttttt gtaatgcggc cattgtcgcc
    19261 ggtacctttt acatatctaa gatcaactcc tttttcggcg gccaattttt tggcaagagg
    19321 tgaagcaaaa attcttcctt catttacaat ttcaggttca ggctgtgact gcttttccgt
    19381 tgactgctgc ggaacgccac tggatgcagt ttcagaaaca tcgccctctg ctttttgttt
    19441 gtcttgttca tcttttgcaa cgggttcttg tttgccagca ccggccttca acccagtcaa
    19501 gactttattt acatcaaaac cttccttccc aataatagct aacaggtcgt tcaccgctat
    19561 cttctctcct tctttggcac cctggtataa aagttttccg tctttatagc tttccagttc
    19621 cattgtggcc ttatcggttt cgatctccgc aaggatgtct ccttttttca catcgtcccc
    19681 aacctttttt tgccacgatg ctattacacc ttcggtcatt gtatcgctca gccgcggcat
    19741 aagcacaact tcatccatat gagaaatgtc gatggtttca gcttgctggt tgctggttgc
    19801 cggtttcgct gtttcctgtt tcttggcttt ttcttttggt tctttcggcg cttctttttt
    19861 cgtatccgct ttcacagctc cgttgctccc atcttttaac agcgggctga tatcttcatt
    19921 cttgtcacca attatcgcga gcaaatcatt cacctgtagc ttccctccct gttccgcacc
    19981 acgatgcaac agcacgccgt tctgatagct ctccagttcc atcgtagcct tgtcagtctc
    20041 gatctccgca agcaagtcgc ctttcttcac agggtcgcca acattcttat gccatgcagc
    20101 gatcacgcct tctgtcatgg tatcacttaa acgaggcatt aaaatttttt cagccatata
    20161 gttaacgata gttgaatgat ttttattcgc ggtgaaatta ctgcaaattg caaatatgcg
    20221 tgaaagcatt ttgacatcag gaattcgccg aatgctcaat gagcaatccg caatctgcaa
    20281 ccggaaatac taaatccgac tatcttagca cgatggataa acgtttgttc ttgctggatg
    20341 cgtatgcgct aattttccgg gcatactatg cgcttatacg caacccgcgt ttcacgtcga
    20401 aaggaagaaa tacgaatgcg caatttggct ttacgaacac gctgatggat cttatcaata
    20461 aagaaaggcc gactcatctt gccgtttgtt ttgatgtgga aggacgaacg gaacgccatt
    20521 ccgattttgc agaatataaa gcgaatcggc aggaaacacc cgaagatctc cttgaggcga
    20581 tccccgatat aaagcgcatt cttgaaggct ttaatattcc atgtatgggc ctggagggat
    20641 acgaagctga tgacgtgatc ggcacacttg cgtggcaggc caatgatgcg gggtatgaag
    20701 tgtacatggt tacacccgat aaagattttg gccagttagt gcgcgatgga attaaaatat
    20761 acaagccggg ctatcagggc ggcatagctg aaatacttgg cccgaaagaa gtttgtgcca
    20821 aatgggacat tgaaagagtt gaccaggtga tagacatttt gagtttgatg ggagattcga
    20881 tcgacaatat ccccggcatc ccgggcatcg gagagaagac cgcatctaaa cttttgaaag
    20941 agcatggcag ccttgaaaac attcttgcca atgcagagaa tataaaaggc gcattaggtg
    21001 aaaagatcaa aaaggggaag gaatctgcgg tgctaagcaa gaagctcgcc accattgtca
    21061 caaatgtgcc tgttcaattt cacgaagaaa atttttgttt aaaggaatgg aataaaccgg
    21121 cacttattga agtgttcact gagcttgaat ttaaatcgct tggcaaaagg gtgctgggcg
    21181 acgagtttaa cgtgttccaa agcgcgcctg tcggagttca aaccgatatg tttgcgcctc
    21241 cggtcgccaa tggcaagcca aaaatccaag ccacagaaga cgaagccgag gtcgaagcac
    21301 tcggcctttc tgcttcgaaa aatataaata atacagaaca caattatttg ctggttgaca
    21361 cgcatgaaaa gatccgtgcg cttgtgggta cgctcatgca acaaacagaa atttgttttg
    21421 acacggagac aaccggcaat gatgcaaacg acgcggaatt gcttgggctg agtttttcct
    21481 acaagcccgg cgaagcatac tttgtgacct gcactaccga ttatgctgac acttgcaact
    21541 tgctaagcct cctggatcct gtttttgaaa atcccgcatt aacgtgggtt ggccacaata
    21601 taaaatatga cctgcttgtg cttaagtggt ataatcggga aataaaggga caggtatatg
    21661 acacgatgct cgtgcagtat gtgatcgagc ctgacatgaa gcgaccgatc gaccagttga
    21721 gcgcccaata tttaggttat gaaccgatcg ccattgagga aatgattggg aaaggcaggg
    21781 cgcaaaccag catgcgcagt gtcgaaatcg aaaaaataaa agattattct gccgaagacg
    21841 tcgacataac cttgcagtta aagcatgcgc tgcatccttt gctaaagaca aaagatgttg
    21901 aacgtgtttt ttatgaagtg gaaaaccctt tggtgaaagt actcacggac atggagtatg
    21961 aaggtgtaat ggtcgacgtt gcttttcttg cgaattattc gaaggaactt gagcgggaag
    22021 cttaccaggc agagcaggct gtctttgcgg gagcaggagt aaaattcctc ttgagttcac
    22081 cgaagcaact gggcgaggtc ttgtttgaaa agcttaaact aaatcccgtt gctaaaaaaa
    22141 cgaagagcgg tcaatatgcg accggcgaag atgtgttgct aaagctcgcg caaagcaacc
    22201 cgatcgttga agatattttg atctatcgcg agcttaccaa gttgaagtcc acttatgtgg
    22261 atgctctacc attactgatc aacaaaaaaa ctggcagagt acacaccaca tttgcccagg
    22321 cggtggcggt aacgggcagg ttatcgagca acaatccaaa tctgcaaaac attccgatac
    22381 gcactgagcg tggcaaagaa ataagaaaag cgtttattcc gagggatggt aatgtaatca
    22441 tcagcgctga ctattcgcag atagagttga ggatcgttgc tggaatcagc ggcgatgaaa
    22501 atatgtgcgc tgccttcaag agcaatatcg atattcatac tgcaacagcc gccaaagtgt
    22561 acgggattgc gccagaagag gtaaccaaag tgcaacggta taaagcgaag agcgtgaatt
    22621 tcgggatcat ctacggccag ggcgcatttg gtttggccga taatcttgga atcagtcgcg
    22681 ctgaagcaaa gcagatcatc gataattata aaaaggaatt cagcggcatc gcgaggtaca
    22741 tggacaatac aatcaatttt tgccgtgaac atggctatgt gcaaaccctg ataggcagaa
    22801 agcgctggtt gaaagatatc aactcttcaa attttaccgt gaggagtttt gcggagcgaa
    22861 atgccatcaa ctcacctatc cagggaaccg cggcagacat gataaaaatg gcgatgataa
    22921 aaattcacga tgctatgcag aaagagaaac tgaaaagtaa aatgatcctg caggtgcatg
    22981 atgaacttgt tttcgacgcg gttaaagaag agctggatgt gttgcaacca ttgatattga
    23041 acaatatgaa aaatgccatg gcattgccgt gcggagttcc tgtagaagca gacctgggag
    23101 tgggagacaa ttggctggag gcgcattgat cgattgagca ctcgttcaaa agtttgtaat
    23161 tttgaactga tattcaacaa aatgaaactt acaattgcta tagccagagg cgaagagttt
    23221 tacataggca caattaaaga aattcctgca gtaggcactc aaggatctac aattgatgaa
    23281 acgcgggaaa atgtccttga cgctttgtct ctctatctca acagcatgca agaaacaaat
    23341 actcttacta atacggtctt agaagaagat ttaattcttg gctaatgagt ttaaaaagga
    23401 atgagttcct tcaacatctt tcaaaacatc agtgttttct ccacaggcag gaagcaagca
    23461 cgatatctat aaaaatcatt tgaacaataa acaaacgact gttccgcggc atccgaagct
    23521 cgatcgattt ttatgtgatg ccatttgcaa agaattggag attcccaagc cgtagcctgc
    23581 taataaaagc aagtaacaca tgtttgctga tcagatcctt aacttcctct ttactgtaaa
    23641 gcttccattc gacttaccca acaatatcca ggttctcgat gcgcatcaac gcaaagatgt
    23701 gagagcagtt tgtacatcgt tttacaaaaa atattacagt gacaaaaata aacgccgcct
    23761 gctcgttggt atcaaccccg gaagattcgg cggcggcaca accggaattc cttttaccga
    23821 tccaatccgt ctcgaaaaag tttgcgggat aaaaaatgat tttcaaaaaa agcaagaatt
    23881 gtcttccgtt ttcatctata atatgatcaa agcgtttgga accgtggagg atttttataa
    23941 tcaattctat ttttcagcgg tcagcccgtt gggctttgtg aaagatggga agaaccttaa
    24001 ttattatgac gacaaagatc tccttcagag cattcagcca ttcattattg attgcatgaa
    24061 ccggcaactt gcctttggaa ttgacgcaga tgtttgcttc tgtatcggcg aaggagagaa
    24121 cttaaaatat ctccaaaaac tcaacgccca acaaaactgg ttcaaaaaaa tacaacctct
    24181 tccacatcca agattcatca tgcagtaccg gctcaagaaa aaacaagagt acattcaaca
    24241 atacgttgac ctgcttgcgt gctaatgaat aatgcgcagc atgaacaaga ccgtcatcaa
    24301 aaagatgacc accagtccag ccaggaagga aaattcagcg agcgtctcat aaataaaaga
    24361 acgatttgtt ttgctccgta tggataaaaa ggcgcacagg caactgaaca tgaagatgac
    24421 aaaacaaccc atcgttattt cgtcgataaa agaagtatcg gtgaccttga agaatctaag
    24481 agatgtgaga accaaaaagc aaaagccaag gaagtttgaa gccgagttta atatttgcgg
    24541 cgatttgtta tccctgtcat ccatctcaac aatttgattg gtagtttcat gcaagtttcc
    24601 gaaaaaactt tatgaggaac gttaaacctg tctaaaataa agatgcccac aacaggatgc
    24661 agatgaattc atgaactttg tccgatgaaa aaattctgct ttttctgttt aacactctca
    24721 accggtatga tcgtaaaagg agctcctcca ctggaaaaaa cattattatg gcaaataaca
    24781 gggcctggca tttctgcgcc atcttattta ttcggcacga tccacctgat gtgcccgggt
    24841 gatattgtag tcgctccaaa tcttgcagaa aagttcaact caacacaaca attatacctg
    24901 gagctcgacc tcgacgatcc cactgtgatg ctgaagacca tgcagcatat ccaaatgaaa
    24961 aacgacacca ccctgaaaga tttattatcc gctgctgatt acgattcgct tttggtgcac
    25021 tttaaaaaac ttaccggcat gtcgctggaa atgatgactt caatgaaacc tgagctgatt
    25081 gagacgctca tgtatcctgc gttattagga tgtgatggag cagaggcctg ggagcaaaag
    25141 ttcctgcaga tggcaaaagc aaatcaaatg gaagtaaaag gcctcgagac agtagatgat
    25201 cagttacaga tttttgatgc gattccgtac aaaacgcagg cacaagagct ggcgcaaacg
    25261 ttcaataata tcgacagtat caagcaaaat ttcaacgcta tgcttgacct gtacaaacga
    25321 aaagatcttg atgctctaca tgcaatgatg tatgaagatg aagaattttc tcagtatgac
    25381 gatcttcttt tgaaaaacag aaatgagaaa tggatcccct tgatcattga acaggctaag
    25441 ctaaagccga cgttcattgc cgtgggcgcc gctcatttgg gaggcgacaa tggagtgatt
    25501 gcacttctgc aaaaaaaagg atatacagtg cagccggtgc aatactaaat tttgggaaat
    25561 atctgcaaca aaatccccac tttttcacgt tagcatttat cgaaaatgcc taataacaag
    25621 gcattaaggc cgcttatggg cgactggcat atttgttggc taaatagtga taacaaaaaa
    25681 acttgttttt acaggttaat tgaaaacaaa aaagtatcac atgaaaaatc tattagttgc
    25741 agcaagcatt gttttaaccg tattaaccct cgatagctgc gcacccggca ggtatacagt
    25801 ttcagcccaa ccagcagttc cggtgtatga aaggcctatg agacccggag ccgattatgt
    25861 ttgggttgac ggcgactggt attggagcgg cggcaggtac gtgtaccgta acggttactg
    25921 gacccgcccg aaaacacacc gcgtttgggt aagtggtgtt tgggtacgtc attctaatgg
    25981 tggttattat tggaaaaagg gatactgggc aaaacaataa aatagttacc tggaaaaact
    26041 gaggctgtgg ctcgatcgaa agatttgaga aaacagcctt tttttatttt tccaattgcc
    26101 agactatact ttgctgcgct ccaatattta tcaggccgga cgtgttaaca gacgtttgat
    26161 caaaaacatt tacagcccgg ttgaatccac cggttcgttc cgaatatttt gagaaatcaa
    26221 ttgcctgttc ggaaaccgaa gtgttgatca cacacatgat ggtttgtttg tcgtcgtacc
    26281 tgaagtaaac atatacaccc ttaaccggaa catactgcat aaattttccg gtcttaatag
    26341 ccgatgaacg caggcggaac tgggccagcg ctttcacgaa attgtacgca tcattttcgg
    26401 cggcagttct tccgcttgcc acaaatttat tttccgggtc gcccggccat ccgccaggaa
    26461 agtcctttct tacttcagcg tcagttggat ttttgaaatt cttcattaag atctccgttc
    26521 cgtaatatat ctgtggaatg ccgcgttgtg tgagcaataa tatcatcgct tgtttatact
    26581 tattgtaatc ttcgccaacc accgagtaaa agcgatccag gtcatgattg tctaaaaaaa
    26641 tttcattgcg cattgggtct ttatacaaaa tatcctgtat cagtgtattg taaaaacggt
    26701 tgatgccacc gttccaggtc attgtatctt ttacgcccgc caacgcgctt ctctgccatt
    26761 caaaatctgt aaccccctgc aggttactct tccattttgt atcgatattg ttctgcatgt
    26821 aataagcctg ctcgacaacc gactgcatac ttgtttcgcc aaatattgtg acgtttggga
    26881 attcacggta cagagcttca tttactttat tcagaaagtc gcggtcgctg tagaagtaag
    26941 tatccacgcg ccagccgtca attccgaatt cttccactgc ccaaagtgca tactggatta
    27001 aatagtttgc catgtacgga ttctgctgat ttacatccgg catgaaacgg gtgaaccagc
    27061 cttttactga gatgtcataa tcgctttttg atgcgtaccg gtcaacgagc ggttgatctt
    27121 tatacgtggt atttgtataa acaggccatt gattgaacca gtcttttgaa ggcggatcgg
    27181 cgaataagaa atgctgatct ccaaaatgat tatacaccgc atcctggatc acctttatgt
    27241 ggcgtgcatg cgcagcgtca accatttgtt tataagcttc gttgccgcca aaacgtttgt
    27301 cgatcttata ttggtccgta aaagcatacc catggtaggt gcttcgcata gttccgttct
    27361 cactggtcaa acccatatca ttctctacga ctggtgtcag ccacaaagca gtaacgccaa
    27421 gatcattgaa gtagtcaaga tgattagtga tgccctgcaa gtctccgccg tgtcttaaaa
    27481 aagggctatt ccggtccgaa ctggtatcct tcatgtcgtt gaacttgtcg ttagaaggat
    27541 cgccgttgct gaaacgatcg ggcatgatta ggtagatcaa atcggccgat gttacaccct
    27601 gtgcatatga tgttccgttg cctttccttc ttgctttcaa ctcccatgtc acattatttc
    27661 cgctggaaaa gtggattgaa acatttcccg gtttcgctgt tgatgcaatg tttacatcaa
    27721 cggccaaata ttttccgttt tcaaatttgt gcgttccggt aaccgcaacg ccggggtagt
    27781 tgatggtcac cgtttgtttg ctgaaattgt catccgtgct gcgcattaat aactgcagtt
    27841 tattccattt cattccgacc caccagtgag tcgggtagat atcgacattc tgtgctgaaa
    27901 gcgcagcaca gagcaatagc attgtaaaga cagtcgacag aaactttttg atcggcatga
    27961 aaaaatttta gaaatatgaa tttaaatgcg gtgaagtttt attcggagag acgtaacgcc
    28021 tctacatctg aaataatttc cgcggcagtt tcgtgttttt tctctcttac catgaaattc
    28081 atgaacccgc caataatcat cgatatgccg ccaacgagca atgcataaat gctttcatca
    28141 ttaaaaacgt ttcttacaaa aaaccccagg atcgcagcag caagaatttg cgggatcaca
    28201 ataaaaaaat tgaaaacacc catgtagaac cccatcttgc tggcgggcaa agcgccggca
    28261 aggatcgcat acggcatagt gagcgtagac gcccaggcca ctcccacgaa ggccatggag
    28321 acaagcagcg tttgatggtc tttaataaag aacaacgata ttaagccggc tccgccaagg
    28381 atcaggcaaa tcaagtgagt aaaccgcctg ctgatctttg ccgctaacat cggcagcaaa
    28441 aaagcggata aagcggaaac gccattatat accatgaaca tcactcctac ccaatcaccc
    28501 gcatcctgga atgatttaga agtagtgtcg gtagtatgat acacattctg agctacgcct
    28561 gctgtagtat agatccacat ggaaaaaaaa gcgagccatg tgaagaattg cacgaccgct
    28621 aattgcagca tcgtttttgg cattgaacca atgccgcgaa caatttccat aaatccctgc
    28681 gcaaagccac gcgattttaa tttttcttct tcccattttt tgatatcctc cggtggaaac
    28741 tcttttgttg taaaaacggt ccacatgacg gcagccagaa acacgaagcc cccaatataa
    28801 aatgaatact tcaccgaatt cgggatcact cccttcgccg ccgtgttgct tataccaaac
    28861 aggttcgtga aaatatatgg caaaagagaa gcgatgaccg cgccgagtcc aatgaaaaaa
    28921 gtttgcattg caaagcctgc cgttcgttgt gatgaaggca acttatcgcc tacaaatgcg
    28981 cgaaaaggct ccattgaaat attgatggac gcatccatga tccacagtaa catcgccgcc
    29041 atccagaggg ctgctgaatt aggcatcaga aataacgcga tcgatgcgag aatagcgccg
    29101 gtgaaaaaaa atggtcttct tctgccccag taaggatgcc atgttctgtc acttaaataa
    29161 ccaatgatgg gttgaaccag caacccggta acgggagcag cgatccataa aatcgctatt
    29221 ttgtcaagat ctgctccgag cgtctgaaaa attctgctca cattcgcatt ctgcagggca
    29281 aagcca
//
LOCUS       DASQJI010000390        13242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1271873,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000390 DASQJI010000000
VERSION     DASQJI010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13242
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271873"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VEV83_10980"
     CDS             <1..894
                     /locus_tag="VEV83_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK45684.1"
                     /translation="TLSASKEDILKTLAVYEIANRNNINGAQFLGMHLEGPYLSSRQC
                     GAQDPKYIRDPDPGEYQEILSQYSCIRRWSAAPELPGALEFARCVRSKNILVALAHTD
                     AIYEEVEKGFENGYTLATHFYSGMSGVTRRNAYRYAGVIESAYLIDEMDVEIIADGIH
                     LPPPLLQLVYKIKGSDRTALITDAMRGAGMPEGESVLGNIDMGLKVIVEDGVAKLPDR
                     SAFAGSVATADRLIRNMINLGGITLKDAVKMMTATPARILNVSDRKGSIEAGMDADIV
                     IFDEDINVKLTMVRGRVVYET"
     gene            955..1152
                     /locus_tag="VEV83_10985"
     CDS             955..1152
                     /locus_tag="VEV83_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45685.1"
                     /translation="MIIELHELFEKIGQLSDEEQRQIANMLDFELQNRMSMSNVEGKM
                     SDLLKTVIIEYQSEKRSQEDW"
     gene            1234..3189
                     /locus_tag="VEV83_10990"
     CDS             1234..3189
                     /locus_tag="VEV83_10990"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK45686.1"
                     /translation="MKIEKKRKVMLLISSIFIFVAAHTQEPTIPVADNLVTDGIPPLP
                     ASIVPEVKSYTESRGAVVVDWHPLKKEMLISTRFGNTPQLHWVKMPGGERKQITFFDE
                     PVSTATFNPVNANYFLYAKDSGGNEFRQIYRYQISTGKSIQLTPGGRSQNGNIAWNEK
                     GNKIVYTSTRRNGADRDIYMMDPLDTSTNKMLMQVSGGGWSIDDWSDDEKKLIVEEEI
                     SVNESSLWIYDFNTGDKKRLLPQQDERAVYSNGIFSKDGKGIYLLSNKDNEFLKLCWY
                     DLSSNKLTVLTPEINWDVTNIDVTKDGKQIAFVTNEAGASKLYIMNTSSKKYMRVDAV
                     PTGVIGGITWHKDGSSLAFSYISSNASSDVFEWNTERQNLTRWTESELGGMDVSGIEP
                     PELIKWKSFDGKEISGFLYKANKKFTGRRPVIINIHGGPEGQSRPTFIGRSNYFLNEL
                     GVSIIYPNVRGSTGYGKTFTDLDNGMKREESVQDIGSLIDWIATQSNLDASRIMITGG
                     SYGGYMTLACAFHYNDKIRCALDVVGISNFNTFLKNTESYRRDLRRVEYGDERDTAMA
                     AFFERTAPLNNVDKITKPMFIVQGKNDPRVPYTESQNMAEKIKKNGGAVWYLMANDEG
                     HGFGKKNNQDFLFYAMVEFVKRYLVND"
     gene            3182..4357
                     /locus_tag="VEV83_10995"
     CDS             3182..4357
                     /locus_tag="VEV83_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK45687.1"
                     /translation="MIKELRQRAKNRGSSLRAEREISNGKKFGCTDSGSLLFLAAITL
                     IFVPTTAFGQDVNDLKLKDYRPVSIYKIPQTKIEKAKYSVTDFHSHDYPKSDAEVDQW
                     VKTMDEVGIAKCMILTYATGARFDSAVAKYARYKDRFELWCGFDYTGYENPGWQTHAI
                     AELERCYKMGARGVGELGDKGLGEFYSTPVKGWGLHIDDLQMKPLLEKCAELHMPVSI
                     HVAEDAWMYQNADSTNDGLMNAAEWKVDMSKKGILDHDQLVATLEHAVRDNPKTIFIA
                     CHLANCCSDLSKLGRLFDKYPNLYADIAARYGEIAPIPRYVHAFMEKYADRIVYGTDM
                     GTSKNMYQITFRILESADEHFYEQDQFNYHWPLYGLALSDATLRKIYHDNGEKILKR"
     gene            complement(4514..5980)
                     /locus_tag="VEV83_11000"
     CDS             complement(4514..5980)
                     /locus_tag="VEV83_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 30 protein"
                     /protein_id="HYK45688.1"
                     /translation="MKLLITGIGVLSILAGKDPQLNKQGNSQPPGFTDNKKVVVYTTA
                     KGTDYRISETETLHFSHMGQPFETQVCVFVDPSKTFQNILGFGGALTDAAAETFYKLP
                     EASRKELMQAYYDKDKGIGYTMARTNINSCDFSSDTYTYVADNDASLSTFNIDHDKKY
                     KIPLIKEAMKASGNDLRLFVSPWSPPAWMKDNNSMIQGGRLKDDMRQSWANYYVKFIK
                     AYEADGIPVWGLTVQNEPMAKQKWESCIYTGEDERDFVKGFLGPTLRKEGLQGQKLII
                     WDHNRDLLYQRAAAVLEDPDAAKYVWGIGYHWYETWTGSGMQFQNMQRVTETFPDKNL
                     IFTEGCAESFDAKRIDDWRLGERYGHSMINDFNNGTVAWTEWNILLDEHGGPNHVGNF
                     CFAPVHADTKTGKLMYTNSYYYIGQLSKFVHPGAKRIISSSNRDKLETTAFMNPDGKL
                     AVVVMNSSDDKITYHLWINGEAAETTALPHSIATLVVE"
     gene            complement(6300..6686)
                     /locus_tag="VEV83_11005"
     CDS             complement(6300..6686)
                     /locus_tag="VEV83_11005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45689.1"
                     /translation="MTTILASYKDSTAYEADDRGYFRFLIVDETKETEICFRNCPANE
                     ANTLQFEIKELPLYEKNARPAFYEFAIPRPFADLFIQKLQQEYLPQNEYDEVQFTPSK
                     NRVESIPQYSNGDELADQDFEIGGEG"
     gene            complement(6778..7653)
                     /gene="ppk2"
                     /locus_tag="VEV83_11010"
     CDS             complement(6778..7653)
                     /gene="ppk2"
                     /locus_tag="VEV83_11010"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HYK45690.1"
                     /translation="MGKKKKLKQQLQEAADNDQDLVSISTDIIVRKDGKLKSKTYEKE
                     MAKYHIELVKLQEWVKNQGLKVVVIFEGRDAAGKGGTIKRITQPLNPRVCRVVALGTA
                     TEREKTQWYFQRYVAQLPAAGEIVLFDRSWYNRAGVERVMSFCTDDEYHEFMRSCPEF
                     ERMIIRSGIILIKYWFSVSDEEQERRFRDRISKPTKRWKLSPIDLESRKRWVEFSRAK
                     DECFKYTDIKQAPWFVVNSDDKRRAHLNCIHHLLSVIPYEDLTPEEMDLPPRQEDTGY
                     VRPPMTDQTFVPDIF"
     gene            complement(7810..8982)
                     /locus_tag="VEV83_11015"
     CDS             complement(7810..8982)
                     /locus_tag="VEV83_11015"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK45691.1"
                     /translation="MKKAVLLQVFMLGALILFAQSSDGNKNNCNLGVSINANYPKAIT
                     LDTIMKRYTTEALPGAAIAIYSETDGWWADAVGYANREEKIPMENCHLQYIQSVSKTY
                     MAVEILQLKEQGKIKLDDPITNYLPARYSKYIKGATQITVRMLLNQNSGVPEYNDNPK
                     FVSQVVQHPLEYFTADDCLKAIENEEPQFAPGAKYKYTNTNYLLLSLIGDAITGDHAA
                     YIREHIFKPLDLSNSYYALDHNYLNGLNLPASYWDILNAGKPADITEFQKETVASSKG
                     DDGIVCTPVDAVKFFKGLMEGKLLNEESMKQMFDFVTDEKGNKRYGMGMIYFDLGGIP
                     AYGHGGGGLGAGCVLAYIPSAKLYMFIATNLGVLVDNDTSKKADDMKNEVLMALLQ"
     gene            complement(9142..9981)
                     /locus_tag="VEV83_11020"
     CDS             complement(9142..9981)
                     /locus_tag="VEV83_11020"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK45692.1"
                     /translation="MAILALYFKMAANQKYHDIKFFLIAIAFISAFNYYLTYSNISLN
                     WHLLLTYSIDTIEGWLAWCAVRSIVIYLDKRLPYSNRPLRRIAIQLLLTTAAGLLVII
                     VLTELVSGIIKHEWVPMSFFLFDVFIFVIWFCVINGIYIGMHYYAEWKLSEEQRQEEK
                     KLRAEGFKVKHGKQDLLIPFNEILSFYAEEGYTVLLTWQNKKYFPDRSLDKIEDGLPG
                     ELFFRLNRQYIVHRKALAGFKRTGDGKIDVMVEAFDNFPKAIPVSRSKAVSFKSWFEP
                     KES"
     gene            10382..11896
                     /locus_tag="VEV83_11025"
     CDS             10382..11896
                     /locus_tag="VEV83_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK45693.1"
                     /translation="MKRYSFLLSISLIVSVFVYAQPSFIRDSLDSYIKKGMKDWNIPG
                     LAIVIVKDGKVVVMKGYGVRNLESKQPVDENTLFMIGSNSKLFTASCLAQLDYQKKIS
                     LDDKITKYFPWFRVYDTNTTNLVTIRDMMAHHLGTKTYQGDFTWWNSSLSRDSIMYKL
                     RLLKPTGNFRQQWGYCNACVLTAGQVIQKVTGKPWEVYVYDAIMEPLGMTNTHALGNN
                     MGEMPDAASPYSNSFSKELQLLNYDNVDNLAPAGSIVTSVKDISKWLMLQLDSGRANG
                     KQIIPWSAMLQTRDINTVITSQKDAFLPLHFYAYGLGLFISDYGGKMTYEHTGGVDGF
                     VTNTCFVPEENLGIAIFTNNDNQEFYELLRYQILDAYAGLPYRNYSELLLPGFLQTRE
                     ETVNRLHTLHARVKSNKPSLSLSAYTGTYYNELFGNIVISAGGGDLHIKFLNHYSLTG
                     LLQYMDKDEWLLTYNNPSFGILPLRFTSENKKVISVDVPMNEFIELDPYTFIKQ"
     gene            12514..12981
                     /locus_tag="VEV83_11030"
     CDS             12514..12981
                     /locus_tag="VEV83_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45694.1"
                     /translation="MKLNAVIFCLILLSCNQPTNNNLQTKIDSLQSVIDKSYKPGLGE
                     FMSNIQVHHAKLWFAGQNRNWELADFEINEIKEAMQGIKDYCRDRPEVRSIGLIEPAI
                     DSVSTSIGKEDRVLFKNAFIQLTNSCNNCHKQTAHGFNVIQIPNTPPFSNQKF"
BASE COUNT         3740 a         2916 c         2928 g         3658 t
ORIGIN      
        1 acattatcag cgagtaaaga ggacatttta aaaacgcttg ctgtttatga aatcgcaaac
       61 agaaataaca tcaacggtgc acagttttta gggatgcatc ttgaaggccc gtatttatca
      121 agcaggcagt gcggtgcaca agacccaaaa tatattcgcg atccggatcc tggcgagtat
      181 caagaaattt tgtcgcaata ttcctgtatc aggcgttgga gtgctgcccc ggaactgccg
      241 ggagcgcttg aatttgcacg ctgcgtaaga tcaaaaaaca ttctcgtcgc actagcgcac
      301 acagatgcca tttatgaaga agttgaaaaa ggttttgaaa atggttacac actcgcgact
      361 catttttact ctggcatgtc tggcgttaca cggcgaaatg cttatcgtta tgcgggcgtg
      421 atcgaaagtg cttatctcat cgatgaaatg gacgttgaaa ttatcgctga tggcattcat
      481 cttccaccgc cattattgca gttggtttac aagatcaaag gctcggaccg aacggctctc
      541 atcacagacg cgatgcgcgg cgcgggcatg cccgaaggtg aaagtgtgtt aggcaatatc
      601 gatatgggtt taaaagtgat cgttgaagat ggtgtagcca aactgccaga ccgcagcgcc
      661 ttcgccggga gcgtggcaac ggcagacagg ctgatcagaa acatgatcaa cctgggcggc
      721 ataacgttaa aagacgctgt aaaaatgatg acagccactc ctgcccgaat cctaaatgtt
      781 tcagatcgta aaggatcgat tgaggcaggc atggatgcag acatcgtgat ttttgatgaa
      841 gatattaatg tgaagttgac aatggtgagg ggacgcgtgg tttatgaaac atgagtgcgg
      901 aacgagctaa ttcgcagtat caaaaaaatt attagcttta aaaaaataaa ccttatgatc
      961 atcgaactac acgaactttt tgagaagatc gggcagcttt ccgatgagga gcaacgtcaa
     1021 atcgcaaata tgcttgactt tgaactgcag aacagaatgt ccatgagcaa tgtagagggc
     1081 aagatgtcgg atctgctcaa aaccgttatc atcgaatatc aatcggaaaa aagatcacag
     1141 gaagattggt agtgcaaccc acacatcgtc cgccggtcaa attcaatttc ccgattgtca
     1201 tcattcattt tatcttccac gcaaaattct tttatgaaaa ttgaaaagaa gagaaaggtc
     1261 atgttgttga tatcttcgat ttttattttt gttgcggcgc acacacagga acccacgatc
     1321 cccgttgccg acaacctcgt aaccgatggc attcctccgc tgcccgcgtc gatcgttccc
     1381 gaggtaaaat cctacactga atcacgcggc gccgttgtcg ttgactggca tccgttaaaa
     1441 aaggaaatgc tcatctcaac acgatttggc aacactcctc aattgcattg ggtgaagatg
     1501 cccggaggcg aaaggaaaca aatcacattt tttgatgaac cggtgtcaac cgcaacgttc
     1561 aaccccgtaa acgccaatta ttttttatat gccaaagact ccggtggcaa cgagtttcgc
     1621 cagatatacc gctatcaaat ttcaacagga aaatcaatac aacttactcc gggtggccga
     1681 agtcaaaatg gaaatatcgc ctggaatgaa aagggaaata agatcgtcta cacctcaaca
     1741 aggcgtaacg gcgcggacag agatatttat atgatggacc cgcttgatac atcaacaaac
     1801 aaaatgctta tgcaggtatc gggcggtggt tggagcatcg atgactggag cgatgatgaa
     1861 aagaaattaa tcgttgaaga agaaatttca gtgaacgaat ccagcttatg gatatatgat
     1921 ttcaataccg gcgacaaaaa gcgattgctt ccgcagcagg atgaacgagc agtttacagc
     1981 aacgggatct ttagtaaaga cggaaaaggt atctacctgc tcagcaataa ggacaacgaa
     2041 tttttaaagc tgtgttggta tgatctttct tcaaacaaat taacagttct cacgccggaa
     2101 ataaattggg acgttacgaa tattgacgtt actaaagatg gaaaacaaat tgctttcgta
     2161 accaacgagg caggcgcatc gaagctttat atcatgaaca cttcatcaaa aaaatatatg
     2221 cgcgttgatg cggttcccac cggtgtgatc ggcggcataa cgtggcataa agatggcagc
     2281 tcgctggcct ttagttacat ctcatccaac gcgagcagcg atgttttcga atggaataca
     2341 gaaagacaga acctgacgcg atggacagag agcgaactcg gcggtatgga cgtttcgggc
     2401 attgaaccgc ctgagttaat taaatggaaa agcttcgacg gaaaagagat atcaggtttc
     2461 ctgtataagg caaataaaaa gtttactggc aggcgtcctg ttatcatcaa tatccatggc
     2521 gggcccgaag gacaatcgcg gccgacattt atcgggcgca gtaattattt cctaaatgaa
     2581 ttgggcgtgt cgatcatcta tccgaacgtt cgcggttcga ctggctacgg taaaacattc
     2641 acggatcttg acaatggcat gaaacgggaa gagtctgtgc aggatatcgg atcattgatc
     2701 gactggattg caacacaatc caatcttgac gcaagccgca ttatgataac cggcggtagc
     2761 tatggcggct acatgacgct cgcttgtgcg tttcattaca acgacaagat ccgttgtgcg
     2821 cttgacgtcg taggaatttc aaacttcaat acctttctaa aaaacacgga gagttatcgg
     2881 cgcgatttga gaagagtaga atacggcgat gaacgcgaca cagcaatggc cgcttttttt
     2941 gaaagaacag ctccactgaa caacgtcgac aagatcacaa agccgatgtt tatagttcag
     3001 ggcaagaatg acccgcgtgt tccgtacacc gagtcccaaa atatggctga gaaaataaag
     3061 aagaacggtg gtgccgtttg gtatcttatg gcgaatgatg aaggccacgg ttttggtaag
     3121 aaaaacaacc aggattttct gttttacgca atggttgaat ttgtgaaaag atacttagtg
     3181 aatgattaaa gaactacgtc agcgcgcgaa gaatcgcggt tcgtcacttc gagcagagcg
     3241 agaaatttcc aacggaaaaa agtttggttg tactgacagc ggatcgcttt tatttttggc
     3301 tgccatcaca ctgatctttg ttcccacaac agctttcggc caggacgtaa atgaccttaa
     3361 attaaaagac tatcgtccgg tttccattta caagatcccg caaacaaaaa ttgaaaaggc
     3421 aaaatattcc gtgacggatt ttcattctca cgattatccg aaatccgatg cggaagtaga
     3481 tcagtgggta aagacaatgg acgaagttgg aattgcaaag tgtatgatcc ttacttatgc
     3541 aaccggtgcg agatttgatt ctgctgtcgc aaagtatgca cgttataaag accggtttga
     3601 attgtggtgt gggttcgatt atacgggcta tgaaaatccg ggctggcaaa cgcatgcgat
     3661 cgcggaatta gaaagatgtt ataagatggg tgcgcgtggc gttggtgaat taggcgataa
     3721 agggcttgga gaattttatt caacgccggt gaaaggttgg ggtctccaca tcgacgatct
     3781 gcaaatgaag ccactgctgg aaaagtgtgc ggagctgcac atgcctgtaa gcatccatgt
     3841 ggcagaagat gcgtggatgt atcaaaatgc cgattccacg aacgatggat tgatgaatgc
     3901 agccgaatgg aaagtggaca tgagcaagaa aggaattctc gatcatgacc aactggttgc
     3961 aacgcttgag cacgctgtca gagacaatcc gaaaacaatt tttattgcct gtcacctcgc
     4021 gaactgttgt tcagatctaa gcaaacttgg gcgactgttt gataaatatc caaatctata
     4081 tgcagatatc gcggctcgct acggagagat cgctccaatt ccgcgttacg tgcatgcatt
     4141 catggagaaa tatgcggata gaattgttta cggcactgat atgggcacga gcaagaacat
     4201 gtaccaaata acttttcgta ttctcgaatc agcagacgaa catttctatg aacaggacca
     4261 attcaattat cactggccat tatatgggct tgcgttgagt gatgcaacac tcaggaaaat
     4321 ttatcatgac aatggtgaaa agatcttgaa gaggtaagtt cggtcgggga tcccttttag
     4381 aatcattgct ccagatcggg cataggcatg ccttaaaatc atgcgattcc cgctttcgcg
     4441 agaatgacgt tcgctgagga aattcttcgt agaaatgtgc tcccttgaaa tttgcatgcg
     4501 gcgaaaaaga agtttattca acaacaagcg ttgcaataga atgtggaaga gccgttgttt
     4561 ctgcggcttc gccattaatc caaagatgat aagtgatctt atcgtctgaa ctattcatta
     4621 caactaccgc taatttacca tcgggattca tgaatgcagt cgtttccaat ttatccctgt
     4681 tagaggaact gatgatccgc ttcgcacccg ggtgaacaaa ttttgaaagt tgaccaatat
     4741 agtagtacga attcgtgtac atcagcttcc ccgtttttgt gtcagcatga acgggtgcaa
     4801 aacaaaaatt tccaacatgg tttggcccac cgtgttcatc gaggagaatg ttccactccg
     4861 tccaggcaac ggtaccatta ttaaaatcgt tgatcatgga gtggccatat ctttctccta
     4921 acctccagtc atctattctt ttcgcatcaa acgattctgc acagccctca gtaaagatca
     4981 ggttcttatc aggaaaagtt tctgttactc tttgcatatt ttgaaactgc atgccgctgc
     5041 ccgtccatgt ttcataccaa tgatacccaa tgccccacac atattttgct gcgtcaggat
     5101 cttcaagcac agcagcagca cgttgataca acaggtccct gttatgatcc cagataatta
     5161 atttctgtcc ttgtaagccc tcctttctca acgttggccc aagaaatcct tttacaaaat
     5221 ctctttcatc ttcaccggtg taaatacatg actcccattt ttgttttgcc atcggttcat
     5281 tttgcacggt aaggccccac accgggatgc cgtctgcctc ataagcttta atgaacttca
     5341 cataataatt cgcccagctt tgtcgcatgt catcttttaa ccgtccgccc tgtatcatac
     5401 tgttgttgtc tttcatccat gcaggcggtg accacggact aacaaaaagg cgcagatcat
     5461 tgccagaagc tttcatcgct tctttgatca ggggtatttt atatttcttg tcgtgatcga
     5521 tattaaaagt cgaaagcgat gcatcattgt ctgcgacata agtgtacgtg tcgctgctga
     5581 aatcgcaact attgatattc gtccttgcca ttgtatatcc aatgcctttg tctttgtcgt
     5641 agtaggcctg catcaattct tttctcgaag cttcaggaag tttgtaaaat gtttctgcgg
     5701 ccgcgtccgt gagggcaccg ccaaagccca atatgttttg aaatgttttg gatggatcga
     5761 caaaaacaca aacctgcgtt tcaaacggct gacccatgtg cgagaaatgt aacgtttctg
     5821 tctcagatat acggtaatct gttcctttcg ccgtcgtgta cacaactact tttttattat
     5881 cagtaaaacc cggtggttgc gaattgcctt gtttgtttaa ttgcggatct tttcccgcaa
     5941 gaatacttaa cacgccaatg ccggttatta gaagtttcat cgcaaattat ttggtgaatt
     6001 atcttgtgac taagagaacg ctaacttaca acaattcagt ggaagaggtg gcacgtgcaa
     6061 acctggtgca ggaaaacaaa cattaaaatt aatgtgatgt ggcattgact ttcagagtgt
     6121 gtggctcatt ctcttagtgt ctttgtgtct tcgagtctta gtggttcgga aagaacagaa
     6181 accactaaga caccacggca ccaagtttca caaagtctgg cctgttttcc cccaaagcca
     6241 tcttaatagc gcaacgcgtt aaaattaatg tgaggacatt catgttccgg gtgcaattct
     6301 tacccctcac ctcctatttc gaagtcctgg tccgcgagtt cgtctccatt cgaatattga
     6361 gggatcgatt caacccggtt tttcgaaggt gtaaactgca cttcgtcgta ttcattctgc
     6421 ggcaaatatt cttgttgtag tttttgtatg aacaggtcag caaatggccg cgggattgcg
     6481 aactcgtaga atgcgggccg tgcatttttc tcatacaacg gcaattcttt tatctcaaat
     6541 tgcaaggtat tcgcctcgtt ggccgggcag ttgcgaaagc aaatttctgt ttctttcgtt
     6601 tcatccacga tcagaaagcg gaaatagccg cgatcatcgg cctcgtaagc cgtgctgtcc
     6661 ttgtatgacg cgagaattgt tgtcatgtgt ttcgaagttt cagtagtgag tgaagtatat
     6721 gacattttta atagctcctg agttgggcgg cgatcgaacg tgtcgcaaat tttaacttca
     6781 aaatatgtcc ggcacaaaag tttggtccgt catcggcgga cgtacataac cagtgtcttc
     6841 ctgtcgcggc ggaagatcca tttcttccgg agtgaggtct tcgtatggga tcacactcag
     6901 gagatgatga atacaattga gatgagctct gcgtttatcg tctgaattta ctacaaacca
     6961 tggcgcttgt ttaatgtcgg tgtatttgaa acattcgtct ttggcgcgcg agaactccac
     7021 ccatcgtttc cttgattcaa gatcgatagg acttaatttc cagcgcttcg ttggcttcga
     7081 tatacgatcg cgaaagcggc gctcctgttc ttcatcgctc acggaaaacc aatatttaat
     7141 aagaataatt cctgaccgaa tgatcatacg ttcaaactca ggacacgaac gcatgaactc
     7201 gtgatattca tcatccgtgc agaaactcat cacgcgttct acaccggcgc ggttgtacca
     7261 acttctgtca aacagaacga tttcaccagc agctggcaac tgtgcaacat accgctgaaa
     7321 ataccactga gtcttttccc tttctgttgc tgttccaagt gcgacaaccc ggcacacgcg
     7381 gggatttaac ggctgcgtga tacgttttat agttccgcct ttacctgcgg cgtcgcgacc
     7441 ttcaaagatc acgactactt tcaatccctg gttctttacc cattcctgca actttaccag
     7501 ttcaatatgg tatttcgcca tctccttttc atacgtctta cttttcagct tgccatcctt
     7561 tctcacaatt atgtccgtgg aaattgaaac aaggtcctgg tcattatccg cagcctcctg
     7621 caattgttgt ttgagtttct tcttcttgcc catagaagat atttccgaaa aggtagaata
     7681 attccttaga attctcaagc aagaacttca ggaaacgata agtttttaaa tttgttgagc
     7741 aacgtccgca ctcatcactc atcactcatc actcatcact cattattcat tattcattcc
     7801 tccctgccct cactgcagca atgccatcag cacttcattc ttcatatcgt cggctttctt
     7861 tgaagtatcg ttgtcaacca acacgccgag gtttgtagcg atgaacatat agagtttggc
     7921 ggatggaatg tatgcaagaa cgcaacctgc tcccaggccg ccaccgccgt ggccataagc
     7981 aggaataccg ccaaggtcaa aatagatcat gcccatgccg taacgtttgt tgcctttttc
     8041 atccgtaaca aaatcaaaca tctgtttcat cgactcttca ttaagtagct tgccttccat
     8101 taatcccttg aaaaatttta cagcgtcaac cggtgtgcaa acaataccgt catcgccttt
     8161 ggatgaggca acggtttcct tttgaaattc ggtgatgtcc gccggcttgc cagcattaag
     8221 gatgtcccaa tatgatgcag gtagattgag cccattcaaa taattgtggt cgagtgcata
     8281 atagctgtta ctcagatcca gtggcttgaa tatatgctcc cttatgtaag cggcatgatc
     8341 accggtgatc gcgtcgccga tcagagagag aagaagataa tttgtgttcg tgtatttgta
     8401 cttagcaccg ggagcaaact gcggctcctc gttttcaatc gctttgaggc aatcgtctgc
     8461 cgtgaaatat tcaagcggat gttgcacgac ctgcgacacg aattttggat tgtcattgta
     8521 ttcaggaacg ccggaatttt gattcaggag catacgcacc gtgatctgcg tggcaccctt
     8581 tatatacttg ctatacctgg caggaagata gtttgtgatc gggtcgtcca gttttatttt
     8641 cccctgttct ttcagctgaa ggatctcaac agccatataa gtttttgaga cactttgtat
     8701 atactgcaga tgacaatttt ccatcgggat cttttcttcc ctgttagcgt accccactgc
     8761 gtcggcccac cagccatcag tttctgaata aatagcaata gcggcgccgg gcaatgcttc
     8821 ggtcgtataa cgcttcatga tagtatccag tgtaatagct tttggatagt ttgcattaat
     8881 cgatactccg aggttgcaat tgtttttatt tccgtctgaa gattgtgcaa acaggatcaa
     8941 tgctccgagc atgaagacct gtaagagaac tgcttttttc ataattcttt ttttcacaaa
     9001 acaacgcacg acgaatagct gtttcctaat ctgcaaagcg cgattcagac caggtgcagc
     9061 aaaattcaca ttgaattgca agctggtaaa tacatgtttc ccacgaagtg tagcaaaatc
     9121 cgggttgaaa tgcgctatat atcaactctc tttcggttca aaccagctct taaagctcac
     9181 cgcctttgac ctgcttacgg ggatcgcctt cggaaaatta tcaaaggcct cgaccattac
     9241 atcgatcttg ccatcgccgg ttcttttaaa accagccagt gcttttcgat gtacaatgta
     9301 ctggcgattc aatcggaaaa ataactcgcc gggcaaacca tcctcaattt tgtcgagcga
     9361 tctgtcggga aaatattttt tgttttgcca tgtgagcagc actgtgtagc cctcttccgc
     9421 ataaaagctc aggatctcat tgaacggtat gagcaggtct tgtttgccat gttttacttt
     9481 gaaaccttct gccctcagct tcttttcttc ctgccgctgt tcttccgaca atttccattc
     9541 agcataataa tgcatgccga tataaatgcc gttgatgaca cagaaccaga tcacgaaaat
     9601 gaaaacatcg aaaagaaaga agctcatagg aacccactcg tgttttatta tcccgctcac
     9661 caattctgtg aggacaataa tgacaagcag tccggctgca gtggtgagaa gcaactgtat
     9721 tgcgatccgc ctcaatggac gattcgagta tggcagtctc ttatctaaat agatcacgat
     9781 agatcgcaca gcacaccacg caagccagcc ctcgatcgta tcgattgaat aagtaagaag
     9841 aagatgccag ttaagggaaa tgtttgaata cgtgaggtaa taattgaatg cgctgataaa
     9901 cgcgatcgcg atcaggaaaa attttatgtc gtgatatttc tggttcgccg ccattttaaa
     9961 atacagcgct aaaatagcca tcagtattgt tgctaactaa aattaaacgt attgtgctat
    10021 taaagttgag tcaaatgatc gcgatccttg cagtaaaata gtgtcgaagt ttcatgaaca
    10081 ggacggcacc tctttcccgc gaaggacaaa ttgatttcgc atttcatccg ggtggaaaga
    10141 tttatttgtt ggcctctaaa aattacttag agcagatgcc cgctcggggc cgggcatgac
    10201 ggcagcgtgg ttgccatatg ttccggcagc aaattagctt aacagaattt tcctggtcga
    10261 tcttaccgca cagcgttaca attaatattt tgaaatcaag cgttttgcag cggatcacca
    10321 atttgtaccc ctcgaatcaa attaaatgta aatcttatct tgccgcctct aatgcgccat
    10381 catgaaaaga tattcatttc ttctttccat ttccctcata gtatcggtgt ttgtctatgc
    10441 tcaaccttca tttataagag atagtctcga cagttacata aagaagggaa tgaaagactg
    10501 gaatatcccg ggccttgcga tcgttattgt gaaagatggg aaagtggttg tcatgaaagg
    10561 gtatggtgtt cgaaacctgg agtcgaaaca accggttgac gaaaacacct tgttcatgat
    10621 cggcagcaac agcaaacttt tcacggcgtc gtgtcttgct cagcttgact atcaaaaaaa
    10681 gatttcactg gatgataaga tcacaaaata ttttccctgg ttcagggttt atgatacaaa
    10741 caccacaaac ctcgttacga tccgggatat gatggcccat catcttggca caaaaacata
    10801 ccagggtgat ttcacatggt ggaactcttc gttatcgcgt gattccatta tgtacaaatt
    10861 gcgtctactt aaaccgaccg gaaattttcg acaacaatgg ggatattgta atgcatgtgt
    10921 cctcaccgca gggcaggtta tccaaaaagt taccggcaag ccctgggaag tatatgtata
    10981 cgacgcaatc atggagccac tcgggatgac aaatacgcac gcgctcggaa acaatatggg
    11041 tgagatgccc gatgcggcaa gtccttatag caattcgttt tcgaaggagt tgcagctatt
    11101 aaattatgac aacgtcgaca atctcgcccc tgccggaagc atagtgactt ctgtaaagga
    11161 tatttcaaaa tggctgatgc ttcagctcga cagtggccgt gcaaatggca aacagatcat
    11221 accatggtcc gctatgctgc aaacaaggga catcaatacg gtcatcacaa gtcaaaaaga
    11281 tgcatttctt ccgcttcatt tttatgcata tggacttggt cttttcataa gcgactatgg
    11341 cggtaagatg acctacgaac ataccggcgg cgtagacggt tttgtcacca atacctgttt
    11401 cgtccctgaa gaaaatttag gcatcgccat tttcacgaac aacgacaacc aggagtttta
    11461 tgagttgctg cgttaccaga tactggatgc gtacgccggt ttgccatacc ggaattacag
    11521 cgaactattg ttgcctggct ttttgcaaac acgcgaagaa acagtgaacc gccttcatac
    11581 attgcacgcc cgtgtgaaaa gcaataagcc gtcgttgtcg ttaagcgcgt ataccggtac
    11641 atattacaat gagttgtttg ggaacattgt tatatcggca ggaggcggag acctgcacat
    11701 caagttttta aatcactaca gtctcaccgg gttgttgcag tatatggata aggatgaatg
    11761 gctgctcact tacaacaatc cttcgtttgg tattttgccg ctaagattta cgtcggagaa
    11821 caaaaaggtt atttcagttg atgtgcccat gaatgaattt attgagcttg atccgtatac
    11881 ttttattaag caataaaagt ttggagtatc aaagtcatcg aaagcgcagg agtgatgcaa
    11941 cattgatgac tcaatctttt tgtattacga acgtattatt atgctattaa ggttgagtca
    12001 aatgatcgcg atccttgcag taaaatattg tacaagtttc atgaactgga ccgcacgtct
    12061 ttctcgcgaa ggcggcaatc tgccaacatt agttcatgca atatggagga cagtctatat
    12121 cttaacaaac gtgcatcatg aagtgttgta cattggcgcg acttctgatc ttttttacaa
    12181 gaattccaaa gcacattacc aaggtttatc caaattcatt caccccaaaa acagaggatg
    12241 caattgcaag agaaaaacaa cttacaaaat ggaatcgaca tggaagaata aattgttttc
    12301 gggtttcaat ccggtaggaa agatttattt attagcctgt aaaattactt agagcagatg
    12361 cccggtccgg gccgggcatg acggcggcgt ggttggcata tgttccggta gcaaactagc
    12421 ttaaacaaat ttttcgcggt ggatattaat ggcacaacag gttattacgg ttcaaactcg
    12481 ccagcatctt ataataaaat cgggtaacaa actatgaaat taaacgctgt tattttttgt
    12541 ttgatacttc tcagttgcaa tcagcctact aacaacaacc tgcaaacgaa aatagatagc
    12601 ctgcagtctg tgatcgataa aagctataag cccggactgg gagaattcat gagcaacatc
    12661 caggtgcatc atgcgaaact gtggttcgcg ggccaaaaca gaaattggga gcttgcagat
    12721 tttgagataa acgagataaa agaggccatg cagggaataa aagactactg cagagatcga
    12781 ccggaagtgc gctccattgg gttgatcgag cctgcgatcg acagcgttag cacttctatc
    12841 ggaaaagaag atcgtgtctt gtttaagaat gcgtttattc aactcaccaa ttcatgcaac
    12901 aattgtcata agcaaacggc tcacggtttc aatgtcattc agattccgaa cacaccaccg
    12961 ttctctaacc agaagttcta gtaaaacgcc ggatgctgtt tatgacatta attagcttcc
    13021 ggcttgattg tcctcattca ccgacacccg tctctcgttg accttgccaa gaagttggtt
    13081 atgttaactt tcccgagtga cctccggtcg ccgccgttaa accaagtgtt tctcgtttac
    13141 agatcatcgg caggccctat tgtcacaatt attcctaaat tgtacaaggt aacgatgact
    13201 gcagcgcctg cttatgttca gatccgtaaa atacctgctg at
//
LOCUS       DASQJI010000391         9659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_966105,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000391 DASQJI010000000
VERSION     DASQJI010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9659
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966105"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(353..964)
                     /locus_tag="VEV83_11035"
     CDS             complement(353..964)
                     /locus_tag="VEV83_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45695.1"
                     /translation="MSGLIAFLSTVGYVVVQLLQVAGILKYPLDEIFIYGTSLCIVIP
                     FVLEMLALHYQTPDEKKFWSHAALIFAIIYSVFVTANYVVQLGTVIPMKLKGAADEIH
                     ILEQTPHSLFWDFDALGYIFMGLATLIAIPVFEKHGFQKWIRISFFANALVTPLITIV
                     YFYPVYSEDLLVLGFPWGITAPVSMLLLAIMFRRNSITHRRAT"
     gene            complement(1293..1961)
                     /locus_tag="VEV83_11040"
     CDS             complement(1293..1961)
                     /locus_tag="VEV83_11040"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK45696.1"
                     /translation="MKKVSLFILIAISMSAYGFSQDTVRIKYGLFAGANVSQIHTTVP
                     GSGSAYSANKVGLNFGILVEVPFSSYFAIQPELSFSQLGWNVTERLYLDSLTLNNPKY
                     NLNYISLPILIKFKVAPTVKNGNGLALYAGPQVGYLAGANLTADNASGSQSIKDGFGS
                     FDFSGIAGAEYFMPMGIGISVRYQLGFSNIFSKEAVDEFYQIYGSDVTVKNHALTVTF
                     GYRF"
     gene            2411..3802
                     /locus_tag="VEV83_11045"
     CDS             2411..3802
                     /locus_tag="VEV83_11045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45697.1"
                     /translation="MIKRIIALLMVFAVAKSHSQNVQFETKFSEPFAVFQFMNSLSDK
                     SPDNVYKKLFNESKFSTEPNTHLIAEFDSLYIGYNYDFIDYPAGEKMGIDVSYLLRRN
                     LILCDSLQDFKLRSMGLIPNERLITLVNLLKQFTPIYQAVIYVPFRKRFEEQLRSVAN
                     LIKSTNINYYFTEALQFYNSSWDISVPFVFCFYPLPNSRGFTATAVSNVAISAIADSL
                     DNYEALLSVMLHEVCHVLYDERSLSLWNQMQEWFDSNPSIVHRYANSLFNEAIATAVA
                     NGYLAAQLNGKEDTTRRWYGVKYINLMAKTAYPLVKEYIEAHKPMDRNFVDRYIQLYE
                     GHYSDWLYDPQYLMRGRLLISDNAADLDTMRNLYEPAPGNEDENEISEAILKKLAVNH
                     GTKVIIVNTNNKEKLQLIKNSLNELKPWHYNAAADFVYYKFLDDKTWLIVLNNINGTT
                     KEKLRSLNIKRTD"
     gene            complement(3884..4459)
                     /locus_tag="VEV83_11050"
     CDS             complement(3884..4459)
                     /locus_tag="VEV83_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45698.1"
                     /translation="MGYAKFIVAIFFLLCACKKEEAVRRLSFSEQERSWFIYHVGQQF
                     KFKSAIGDSIIFLVDSVIDYFHPEYKYPDTTVVIDEAETYVAHLTAADDFINIAFYKS
                     SLYLSDASELNETIAWHDVTGQFVEIDAIKSETPFTVKTLNGVTYDKVSAAVPMSDVL
                     YPWTRWESAYYDQKSGFIELIDTSGASWIRQ"
     gene            complement(4738..5538)
                     /locus_tag="VEV83_11055"
     CDS             complement(4738..5538)
                     /locus_tag="VEV83_11055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HYK45699.1"
                     /translation="MLKKSITITAVLLIFQLARAQDTTKFTAETLKLYPILWQQTAAE
                     YRALCYQAFNIATMRIDDVIKREPGKNNLAIITDLDETVLNNSNVTAQMIKTGKDVNS
                     QEWLQWIKTVDPPVVPGAVEFLQYAASKKINVFYISNREVSGLQFTLSILQKLGLPNA
                     DTSHMLFLSKDFSKEPRRQVVMKNYDVVLLLGDNLNDFMRVFEEKPIAERLKETDHVK
                     EEWGRKFIVLPNATYGEWENALFDYKDSLSFDQIMTTLKAELQGIDKK"
     gene            complement(5720..7153)
                     /locus_tag="VEV83_11060"
     CDS             complement(5720..7153)
                     /locus_tag="VEV83_11060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45700.1"
                     /translation="MKILLAALLVVISLPPADAQTLKETSEQIEGLPLGMYGAFNDVL
                     YTGTNECIYVTGKESIVGAFDAALVKVNSDLKVLWTTERTEGFLCAAKFANNIIVFST
                     EDWKKNTADFIKTIHAKLIDLQTGKTIREKDVYKVSDRLYVQPHLLTDSAANFQYLEI
                     RYTKQDKFIYFSAAKREEALRGTTKIDLLSLTDNLDAKSVTLDISSLKTVTYDGSISD
                     SKGDLFVVSHSMNSVMVEQYQNMQPAVVTGLKVKASFPEDAEVGGIISHGKKDDEIMV
                     LLRTRGDVSSIATARFNFETKQVYSDVTAGKQLPLKQDPDLILVGFEYYKDKIIILSE
                     KFGIRQALMTNNKTTVRYFCGDMHVSVCDSNFTLIKDVVVKKLAEFNIDVGLRSGYKI
                     SGDQLFVLSNTMPGALHIEIKYAVVDLNALTLHDGMIENTKAKGNGAIVGSETLWFNK
                     TALTPLIIDRSITSTRKFDNILQKIEF"
     gene            complement(7301..7951)
                     /locus_tag="VEV83_11065"
     CDS             complement(7301..7951)
                     /locus_tag="VEV83_11065"
                     /inference="COORDINATES: protein motif:HMM:NF014469.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45701.1"
                     /translation="MTKITRISKIIFASFFIISFASAQVKYVTVTGAGLKDGSSWANA
                     YDNLSFAKRLWHADSGTVFWLAKGTYKPKVDSVGNASPADSRTKTFSVNSRVVIYGGF
                     AGNETSLSQRNISANLVILSGDINAIGDSTDNSYHVMRFSLIYYTDGSDYGVNGCTIR
                     DGNANGSGTNGYGGGIFTVGYIGVFNCTFLNNSAESGGAIYHYDVGGVNSNNNFCY"
     gene            complement(7948..>9659)
                     /locus_tag="VEV83_11070"
     CDS             complement(7948..>9659)
                     /locus_tag="VEV83_11070"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HYK45702.1"
                     /translation="NIDSVYNASICIQPDGKIVVLGTHGQVDNYHPNYFVLLRHTIDG
                     SLDSSFGINGRVNTYFDSGPDFGLLATSLLIQPDGKLVAGGFKWGSAQPQYYILARYL
                     PDGTLDSAFGENGKVIHEIGPFPKENELNVLALQADGKILAGGNSDGYCVVRYKANGS
                     IDSSFANNGILRDQNFYGGLSDLLLQKDGKIITAGGAAYAFNVPQDFLINRISSNGTF
                     DSSFGTNGFVLTDFYGGSDGASSVVQLNDTSFIVGGYAHNDTTSSNYNAFAVYKKNGN
                     LFRPFGVNGKTTIAGPTSANMKVLVDTYGRIISAGSILVRLNTNGIVDSTFGENGKAI
                     NFQGAQDAVLQADQKIVTMNSGFLQRFIEDEPIVSIAKNISLIEGNIGYSAAKFKVLL
                     NHSSASTVKVNYTTKNGTAQAGSDYVAASGTATIKPGNVSKIVTVNVIGDNTYESNEK
                     FSLVLTNPVNALLGDLDSATCTIKNDDPLSSQQQTSTDAISYNSTIKLFPNPAKDQLT
                     IGGLSSQLTTVCVIDMRGKTIIQTSANNRTSTINIKQLSPRVYYLRIATAEKVTTLKF
                     IKQ"
BASE COUNT         2851 a         1976 c         1842 g         2990 t
ORIGIN      
        1 gtcaaacctt ccgattattt atttacactt tttgtaagca gggttgaatc tataatcctg
       61 aaagaaagag atgatactat tgaaaagata accaggctgt cgttagatca attaaaatca
      121 agccattgaa acctgacggc atagtttctt cattctaagc cggcaaaaag gttatatggc
      181 cacttcatac aaaaagtttt ttccccggaa gaggttttct ctgaaggaaa ataatgattt
      241 ataattaagt tcagaatggc ttattctgta tcagaagacg atgcttgaca tgaaggtcta
      301 gaacagtttt tctggcaatc ggtatttggt gaagccctgc tattgcgaat actcatgtgg
      361 cgcgcctgtg cgttatagaa tttcttctaa acattattgc gagtaataac attgaaaccg
      421 gagctgtaat gccccaggga aaacctaaaa caagcagatc ctctgaatac accggataga
      481 aatatacaat tgtgatcaaa ggagtaacaa gtgcgttagc gaaaaaagaa attctgatcc
      541 atttttgaaa tccgtgcttt tcaaaaacag ggatcgctat taaagttgct aaacccatga
      601 atatgtatcc taacgcatca aagtcccaaa acagggagtg tggcgtttgt tcgagaatat
      661 gaatttcatc tgcagcacct tttagcttca tgggaattac cgttcccaat tggacaacat
      721 aatttgcagt aacaaacacg gaatagatga tagcaaaaat tagagctgcg tggctccaaa
      781 attttttctc atccggcgtt tggtaatgaa gcgcgagcat ttcgagaaca aatggtataa
      841 ctatgcaaag agaagtgcca taaataaaga tctcatctaa cggatattta aggataccgg
      901 caacctgcaa caactgaaca acaacatatc caactgttga aagaaaagca ataagtcctg
      961 acaaaaaacc gattttatat attgtttggc tcacaggtgc ctcgttaaat tcgtgcaagg
     1021 gcttcgaaat tttacggttg tatccacatc atcacaacga aaacatattt tgcgtttgca
     1081 gggataggta ttgaccgtcg agccctcgca aataccaatt gaaaatattt tgttgaagat
     1141 aacatttgca gcccaatcat taatgtcaag atcgaactgt tgcggtgtag aaatttgttg
     1201 tcgatgattt tccgttagcc ctgctattgg aaataccatg ttgtctgcag atttttgaaa
     1261 cattattaga acgacaacgc ggctatgctt cgctaaaacc tgtaaccaaa tgttactgtc
     1321 agtgcatgat ttttaaccgt tacatcggaa ccatagattt ggtaaaattc atcaacggct
     1381 tctttgctga aaatgttgga aaagcccagt tgatatctca cactgattcc tatccccatg
     1441 ggcataaaat attcggctcc tgcgataccc gaaaaatcaa aagagccgaa gccgtcttta
     1501 atgctttgac tgccggaagc attatcagca gttaaattcg cacctgcgag atagccaacc
     1561 tgcggccctg cgtacaaggc caacccgttt ccgttcttga cggtgggcgc caccttaaat
     1621 tttattaaaa ttggcagaga gatgtagtta agattgtact tcggattatt cagcgttaag
     1681 ctgtctaagt acaaccgctc ggtgacgttc cagcccaatt gcgaaaacga cagttctggt
     1741 tggatcgcaa agtagctcga aaacggaact tcgaccaata taccaaaatt caatcccact
     1801 ttattagcag agtaagcgct gccggaccct ggaacagtag tatgtatttg ggaaacatta
     1861 gctcctgcga ataaaccgta cttaattctg acagtatcct gtgaaaaacc gtaagctgac
     1921 atgctgattg caataaggat aaagagagaa acttttttca tatttgatgt tcgactaata
     1981 acgcttttga taacaattat attcttagtc tatgatttga ccactgtcag aataatttaa
     2041 tttatgggac gaactttgcg ccggccgtgc ctggggcgct atgattttcg aactaaaaat
     2101 tctcacagca atttttggcc taccatgtaa ttgaaaaaaa attgtcggtg tgaagataat
     2161 gaatatcggt ttcaatgaat tttaagctcc atttgataca ttgtttaccc tgctctaata
     2221 aagtatttgc atacatgccc atccgcggac ggcaataatt ctcatcagcc agcgcaagcg
     2281 ttcaaaatcg cgtttcagtt attgtttttc aggtttaaac ccacccgacc tattgttgaa
     2341 aaaaagtgga cgtacatttg atagtacgat cattttcgta tattagaatc gcctgttcaa
     2401 aaatgatcac atgatcaaac gaatcattgc actgttaatg gtgttcgccg tagcaaaaag
     2461 ccattctcaa aatgtacaat ttgaaaccaa attttcagag ccattcgctg tttttcaatt
     2521 tatgaacagc ctgtcagata aatcccccga caacgtgtat aaaaaattgt tcaacgaatc
     2581 aaagttttcg accgaaccaa atacacattt gatcgctgag tttgactcac tgtacatagg
     2641 ctataattat gactttatcg attatcccgc cggtgaaaaa atgggaatag atgtgtccta
     2701 tcttttaaga cgaaacctca ttctgtgcga tagcctccaa gactttaaat tgcgttccat
     2761 gggtcttatc ccaaatgaaa gattaattac acttgtaaat ttactgaagc aattcacgcc
     2821 tatttatcaa gccgtaattt atgtgccatt cagaaaaaga tttgaagaac aactgaggtc
     2881 cgttgccaac ttaataaaat caacgaacat caattattat tttaccgagg cgcttcaatt
     2941 ttataattct tcctgggata tttcggtgcc ttttgttttt tgtttttatc ctttgcctaa
     3001 ttcaagaggc tttactgcca ctgctgtaag taatgttgct attagtgcta ttgctgacag
     3061 cctggataat tatgaagctt tactatctgt tatgcttcat gaagtatgtc atgtgcttta
     3121 tgatgaaaga tccctttcgt tatggaatca aatgcaagaa tggttcgata gtaatccatc
     3181 aattgtacac aggtatgcga actcactttt taatgaagcc attgcaacag ccgttgctaa
     3241 tggatatctc gctgcacagt taaatggaaa agaagacaca acgcgccggt ggtatggagt
     3301 caagtatatt aatttgatgg caaaaactgc ttatcctttg gttaaggagt acattgaagc
     3361 ccataaacct atggacagga attttgtaga tcggtatatt caactgtatg agggccatta
     3421 ttccgattgg ctttacgacc cgcaatattt aatgagggga cgattgttaa tcagcgacaa
     3481 cgctgcagat cttgatacga tgcgcaattt gtatgagccg gcaccaggta atgaagacga
     3541 aaacgaaata tcagaagcta tattgaaaaa attagctgtt aatcacggca ccaaagtaat
     3601 tattgtgaat acgaataata aagagaaact acaattaatt aaaaatagtt tgaatgagtt
     3661 aaagccatgg cattataacg cagccgcgga ttttgtctat tataaatttt tagacgataa
     3721 aacctggttg attgtcttaa ataacattaa tggtacaaca aaagaaaaat taaggagctt
     3781 aaatattaaa cgaacggatt aaaattgccg ctaatagcct tgctttgatt tcctgccccc
     3841 tgatcttccg tcttgctgtt gaaaataccg ctgttgtgtt agtttattgc cgtatccacg
     3901 aagctccact tgtatcaatt agttctataa aaccagattt ttggtcataa taagcgcttt
     3961 cccatcttgt ccacggatat aatacgtcgc tcatcggaac cgcggcactc actttgtcat
     4021 aggtaacacc gttgagggtc tttacagtaa aaggagtttc acttttgata gcgtctattt
     4081 ctacaaattg tccggttaca tcatgccacg caatcgtttc atttaattca ctggcgtccg
     4141 aaagatatag agacgattta tagaaagcaa tattaataaa atcatcagct gctgtcaaat
     4201 gcgctacata agtctcagct tcatcgatta ctaccgtcgt atcgggatac ttatattccg
     4261 ggtgaaaata atcaatcaca gagtcaacca ggaaaatgat agaatcaccg atcgcgcttt
     4321 taaacttaaa ttgttgtcca acatgataaa taaaccaact tctttcttgt tcagaaaatg
     4381 aaagtcgccg gaccgcctct tcctttttac aggcgcataa cagaaaaaaa atggctacaa
     4441 taaattttgc gtatcccatg gctttatcaa ttttcggcga agttctaaga ttgaaaatgt
     4501 tttgctgaag gtagcatttg ctgcttaata ttaacgtcaa gccgcaacta ctgctgcgga
     4561 ttactcgggc ttgtgccgct ttgaatctgt agacagtttg tcgtatcggt gtatgttggt
     4621 actaatgcag ccggagcgtt tcaggttata tttattgttg tactgttacc cttggaaatg
     4681 ttcatcaccg attaatatta cttcgcatga attttttttt aaggatggtt gcttctgcta
     4741 tttcttatca atgccctgca attctgcttt tagtgtagtc attatttggt caaaagatag
     4801 agagtcttta taatcgaaca aggcattttc ccattctcca taggtggcat taggcaacac
     4861 aataaatttc ctaccccatt cttcttttac gtggtctgtt tcctttagtc tttcggcgat
     4921 cggtttttct tcaaaaaccc gcataaaatc attcagatta tcacctaata ataacaccac
     4981 gtcataattc ttcattacaa cttgtctgcg cggttctttt gaaaagtctt tagaaagaaa
     5041 aagcatatgg cttgtatcag cattcggcaa tcctagcttt tgcagaattg aaagagtgaa
     5101 ctgcaaacct gatacttcgc ggttacttat ataaaaaaca tttatttttt tactcgccgc
     5161 atattgcaaa aactcaacag cacccggaac cacaggcggg tcaacagttt taatccattg
     5221 cagccactcc tgtgaattaa cgtctttccc ggttttgatc atctgggctg ttacgttact
     5281 attgtttaat accgtttcat cgaggtctgt gataattgcc aggttattct ttccaggttc
     5341 tctctttatc acatcatcaa tgcgcattgt tgctatatta aatgcctggt agcaaagagc
     5401 tctgtattcg gcagcagtct gttgccataa aataggatac agctttaaag tttcagcagt
     5461 aaactttgtg gtatcctgtg ctcgcgctaa ttgaaatatc aacaagactg cagttatagt
     5521 aatcgacttc ttcaacataa cacaatagta acaaaaaaac agttgtcata attaacctca
     5581 tcagaaaaca cttagccatg aagatgaaag cgtggtaaaa tgttgcccac ccataatttt
     5641 tacaacttga accctgataa aatatcgacc gtgaaatgtt tgaataatgc ctggaagcaa
     5701 tcgaggccat catgtcacct cagaactcta ttttttgtaa aatgttatcg aattttcgcg
     5761 ttgaagttat tgagcgatca attattagcg gtgtcagcgc cgtcttattg aaccaaagcg
     5821 tctccgaacc tacaatagcg ccgttgcctt tagctttggt attctcgatc attccatcat
     5881 gtaatgtcaa ggcatttaag tcaacgactg catattttat ttctatatgc agcgctcccg
     5941 gcattgtgtt agacagtacg aataactggt ctcctgaaat tttatacccg gatcgaagcc
     6001 cgacatcgat attaaattca gcaagctttt ttacaactac atctttgatc agtgtaaagt
     6061 tgctatcgca tacagatacg tgcatgtcgc cgcagaagta cctcactgtt gtcttattat
     6121 tagtcattag cgcctgcctg attccaaatt tctcacttaa aataattatt ttgtccttat
     6181 agtattcaaa gcccactaaa atgagatcag ggtcttgttt taaaggcagt tgcttgcccg
     6241 cagtcacgtc tgaataaacc tgttttgttt cgaagttaaa ccgcgcagta gctatcgaag
     6301 acacatctcc gcgggtcctc aacaaaacca taatctcgtc gtctttttta ccatggctaa
     6361 ttatgcctcc gacttcagca tcttccggaa aagaagcttt gacttttaaa cctgtaacga
     6421 cagcaggttg catattctga tattgttcaa ccataacact gttcattgaa tgagagacta
     6481 caaacaggtc gcccttactg tctgatatac tgccatcgta cgtgaccgtc ttgagactcg
     6541 aaatatctaa tgtcacactt tttgcatcca ggttgtcagt gagagagagg agatcaattt
     6601 ttgttgtgcc tcttaaagcc tcttcccttt ttgcagcact gaagtagatg aacttgtcct
     6661 gtttggtgta acggatttct aaatactgga agtttgctgc agaatcggtc agcaaatgtg
     6721 gctgcacata taacctgtca gaaactttat agacatcttt ttcgcgaatg gtcttgccag
     6781 tctgaaggtc aatcaatttt gcgtggatcg ttttgataaa atcagcggtg ttttttttcc
     6841 agtcctcagt ggaaaagacg atgatattat tggcaaactt tgcagcgcac aaaaatcctt
     6901 ctgtgcgttc tgtggtccac aatactttga gatcgctatt tacttttaca agggctgcgt
     6961 cgaaagcgcc gacgatggat tcttttcccg ttacgtaaat acattcgttt gttccagtgt
     7021 atagaacatc gttaaatgcg ccatacattc cgagaggtaa tccttcgatt tgttcggagg
     7081 tctctttaag tgtttgcgca tctgccggtg gaagcgagat cacaaccagc aatgccgcga
     7141 gtaaaatttt catttgactt actgttttat aaacttcagg atcgtgggcg taccatttgt
     7201 ttgtattctt acataataaa cgccagccga tagttgcttt acatcgattg tcttgctttc
     7261 attttttgct accgtttcga taaggtttct tccttgtata tcaataacag aaattattgt
     7321 ttgagttgac tcccccaacg tcataatgat atatggctcc tccggattcc gcactattgt
     7381 ttaaaaatgt gcaattaaaa actcctatat agcccacggt aaatattcct ccgccatatc
     7441 cattggttcc cgaaccgttt gcattaccgt ccctgatagt acatccattc actccgtagt
     7501 cgcttccatc ggtataatat ataagggaaa acctcataac atgatatgaa ttatcggtgc
     7561 tatcaccaat agcattgata tctccactta gaataacaag gtttgcggaa atgtttcttt
     7621 gagaaagaga tgtttcgtta cccgcaaagc cgccataaat aaccacgcgc gagttaacgg
     7681 aaaatgtttt tgttcttgaa tctgcaggac tggcgtttcc gaccgaatcc acttttggtt
     7741 tataggtacc ttttgccagc caaaagaccg tacctgaatc tgcatgccaa aggcgtttag
     7801 cgaaagaaag attgtcataa gcattagccc aggatgaacc atctttaaga ccggcgcccg
     7861 tgacagtaac atactttact tgcgcgctgg caaaagaaat gataaaaaaa gaagcgaaga
     7921 ttatcttgct tattcgcgta atctttgtca ttgcttaata aacttcaacg ttgtaacctt
     7981 ttcagctgtg gctattctca aataataaac gcgtggcgaa agctgcttta tattaattgt
     8041 gctagttcga ttgtttgcag atgtttggat gattgttttt cctcgcatat cgataacaca
     8101 taccgtcgtg agttgtgaac ttaaacctcc aattgtcaat tgatcttttg cgggatttgg
     8161 aaacagtttg atggtcgagt tataactaat tgcgtcagta ctcgtttgct gttgagatga
     8221 taatgggtca tcatttttga ttgtgcacgt tgcgctgtct aaatctccaa gcaaggcatt
     8281 tacaggattg gttaatacaa gcgaaaattt ttcattgctc tcgtacgtgt tgtcaccaat
     8341 aacatttaca gtaactattt tagaaacgtt gcccggcttg atggttgcag ttccggatgc
     8401 ggccacatag tctgaacccg cttgtgcagt tccattcttt gtagtgtaat ttacttttac
     8461 agtggaagcc gaggaatgat taagcaggac cttaaactta gccgcgctgt aaccaatgtt
     8521 gccttcgatg agagaaatat tttttgcgat agaaactatc ggttcgtctt caataaatct
     8581 ttgcagaaag ccgctgttca ttgtaacaat tttttggtct gcctgtaaaa cggcatcctg
     8641 cgcgccttga aagttgatcg ccttcccgtt ttcgccaaat gttgaatcaa caattccatt
     8701 ggtgttcaag cgaactagta ttgagcctgc tgatataatt cttccatacg tatctacaag
     8761 aaccttcata ttcgcgctag tcggtcccgc gattgtagtt tttccgttca ctccaaaagg
     8821 tcgaaagagg ttaccatttt ttttatagac agcaaaggca ttgtagttag aggaggtggt
     8881 gtcattatgc gcgtaacctc caacaatgaa acttgtatca ttcaattgaa cgacagaaga
     8941 tgcgccatca cttccgccat aaaaatctgt caaaacaaaa ccattggtgc cgaaacttga
     9001 atcaaaggtg ccgtttgaag aaatacgatt aattagaaaa tcctggggaa cattgaacgc
     9061 gtatgctgct cctcccgcag tgatgatttt tccgtctttt tgcaagagaa ggtcgcttag
     9121 gccaccataa aaattctgat cacgcaaaat tccattatta gcaaacgacg aatcaataga
     9181 tccattggct ttatatctta ccacgcaata tccatcacta tttcctccag ctaatatttt
     9241 tccatcagct tgaagagcta aaacatttaa ttcattttcc tttggaaatg gtcctatctc
     9301 atgaatcacc tttccatttt cgccaaacgc agaatcaaga gtcccatccg gtagataacg
     9361 cgctaaaata taatattgcg gttgtgcact tccccattta aaacctcctg cgactaattt
     9421 accatcaggc tggattaaga gtgaggtggc tagaagcccg aaatcaggtc ctgaatcaaa
     9481 ataggtattt accctgccgt taatgccgaa gcttgaatcc agcgagccat cgatggtatg
     9541 acgcaacagc acgaaatagt taggatggta attatctacc tggccatgag ttcccagcac
     9601 cactattttt ccatctggtt gaatgcaaat tgaagcgttg tatacgctgt cgatgtttg
//
LOCUS       DASQJI010000392         6729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2195058,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000392 DASQJI010000000
VERSION     DASQJI010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6729
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2195058"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VEV83_11075"
     CDS             complement(<1..596)
                     /locus_tag="VEV83_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK45703.1"
                     /translation="MSITLTIVEDLDEVRDGLKNFIGLSTDFKVLDTFKNAEEALSEI
                     PNLKPDIVIMDINLPGMNGIECIRQLKGATPATQFMMFTVYENDEKVFEALKAGASGY
                     LLKNTGLVQLIEALKELNNGGSPMSANIARKVVNLFRQEQKQVAAQTVLSARENEILQ
                     LLAKGLLYKEIADKLGISTNTVRQHIHKIYEKLHVQNRT"
     gene            complement(647..3640)
                     /locus_tag="VEV83_11080"
     CDS             complement(647..3640)
                     /locus_tag="VEV83_11080"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK45704.1"
                     /translation="MWFRSFLLLLLIPFAVCEVYAQAEGPEGQYPFVHYTPKDGLVNS
                     RVRKAFQDSKGRIYFITYGGLSVFDGARFRNYTTQNGLASDVVNDIFEAGDDSFLVAT
                     NSGYFVNVLVKGKLGVLNKTDRTCPVVNQFYLHDDHKIYVASDNGLFVLENKKFLELN
                     TSSLSANGRDIPYVSTIAGIGNYLVLSTDDMSSHKGLYLYNIMADSICDFIRGANIFI
                     VGKDSLHDIWITRSDKLFVLDPVNLSRGKIVFTIPPAGYERANTYSSVNVAFDRNSIW
                     MVYRNKDNRSDEIQRIPASGTLLTIPLPEQMTSFDIGNIMIDKENTIWLCNDGEGVFK
                     IINTPLRVFANPFAEPMQGRVANVFCADGSTWYSTNTNKLFCRSSTGSEKFICNVNPA
                     PAIFFRDGNRLLAHDYNNIYESVLKGGDAIEFKKTISLPASDFFGKELVVDRNGAIVS
                     SQRTGLGVWKNKKLIFLFPVTPKETFDALKLDSNNMLWAVTRYSGVHVFSIHPEDPSH
                     YLRDSLHFDTSRFTGSPRCATWDKNGLMWIGTRNDGLFAYGYSGNRLNEVYHFNIENG
                     LTDNFVTTLACDSLNNIIVGTQTGLDRIVRSSNSYRVENLSKSSNFFAFIKQAWADEK
                     QAYGLTSSGMLLQLASAREDILSYEPKLLLDEMRVNGRPTVNGESSFKYRENNISFFV
                     AAPSFIDENRVSYSYRLAGSGNQQWSDTSPANSVINLTNLSAANYTLTVKAFFPSAAY
                     APVELSYSFAITPPWWETWPVRVIAALLFIAVLILAIRFYYRRKLDKQKTVLEKRQAI
                     EKERTRIATDMHDDLGAGLTRIKFLSETIGIKKQQQQPIEEDITRIREYSHEMIDKMG
                     EIVWALNEKNDTLSDLLSYTRAYAVEYLSQNGIHCTMEIPESFPSTFVSGEFRRNIYL
                     TVKEALHNVVKHSAATEVIFKMRTDDQLIIEIKDNGCGFEQTNLRMFSNGITNMNTRT
                     KELGGGIDIINDNGTDIIIRVPIKT"
     gene            complement(3741..6155)
                     /locus_tag="VEV83_11085"
     CDS             complement(3741..6155)
                     /locus_tag="VEV83_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45705.1"
                     /translation="MLDEIVPILIPSKKSKVMTAGSAIKQSLPDVDSNISFLPLINYL
                     KEKTPDVSNIKSSFYKYLVKKFEDTPELLQTISDMVVLEENSELLELLGTMLFPVVSK
                     HEKNTFALATPYQFEVFYYSDGFRELFMDAKEERLLLPAGMSAEQLKAIECSMIYDHI
                     LEKFYGVRLNESPALVYPVADAATGLKRYYKIRCDRRFIDIQLKGTLPRLQDCAVCMN
                     TFRILDLEKQLHTMPLDLFRIEGFGVWIAEDVTKTEALEASKKILLQQGEFDAPVIEQ
                     LKSVVQIMIGLNDIEIGLMPFVKINDEMVLETEFTKHSIVGKDWKADSEADKMAFQMY
                     TRFLTERGAEPIPISQINQEMLDFATFLKAPYARGTRSYISYPLRNGDGLLGMLEVSS
                     NVPGQMTHEVMSRIEPAVPLLSVALLKVRDIFLNRIEQLIKEKFTALQQSVEWKFTEA
                     AWSFLRDNSCNVRVVFEDVYPLYGAIDIRNSSIERSQAIQKDLKEHLGLIDKTLDQLQ
                     ELTSLPLLEGLKFKTGNVLHSIAQAMNTEDEVRTNEFIENEVQPVFGHLQKSNKQAQF
                     LIDSYYNTVKDTDSEIYHYRHEYEQTLAMINNAVLQYLEKEEEQIQKWYPHYFERYRT
                     DGVEYNIYIGQSIAPNCPFDTLYLKNIRLWQLKSMAEAARITHALLPQMKVPLQTCQL
                     ILIHSPSITICFRSDEKRFDVEGSYNIRYETIKKRLDKARTKETGERLTQPGTIAIVY
                     SNQKELQEYQEYIEFLQNKNILKPGLELLELEELQGVKGLKAMRVEINMEGEKIPISA
                     QCIETT"
     regulatory      complement(6269..6366)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
BASE COUNT         1746 a         1556 c         1413 g         2014 t
ORIGIN      
        1 gtcctgtttt gcacgtgcag cttctcgtat attttgtgta tatgctggcg aacagtattg
       61 gtgctaattc cgagcttatc agcaatttct ttgtataata atcctttagc gagcagttgc
      121 agtatttcat tttcgcgtgc actgagtacg gtctgcgcag caacttgctt ttgttcctgg
      181 cggaaaagat ttaccacttt gcgtgcaatg ttagcgctca ttgggcttcc accgttattg
      241 agttctttaa gtgcttcgat gagttgaaca aggccggtgt tcttcaacaa ataaccggac
      301 gctccggctt tcagcgcttc aaaaactttt tcatcattct catacacggt gaacatcatg
      361 aactgtgtgg cgggtgttgc tcctttcaac tgccggatac attcaattcc attcatgccc
      421 ggaagattaa tatccatgat cactatatcc ggtttcagat ttggtatttc agacaaagct
      481 tcttcagcgt ttttgaaagt gtcaagcacc ttaaaatcgg tgctgaggcc aataaagttt
      541 tttaatccgt cgcgcacttc gtcgaggtct tccacaatgg ttaatgtgat gctcatgtgt
      601 gtctcgaaag tattttgttg agcacaatcc gccaatagaa caaaagttat gttttgatcg
      661 gcacgcggat aattatatct gttccgttat catttatgat gtcgattccg cctcccaatt
      721 ctttggttct tgtgttcata tttgttatac cgttgctaaa catgcgcaag ttcgtttgtt
      781 caaatccaca accgttgtct ttgatctcaa taatgagctg gtcgtcggtg cgcattttaa
      841 aaataacctc cgttgctgcc gaatgtttta ccacgttatg caatgcctct tttacagtga
      901 gatatatatt tctcctgaac tcaccactta caaatgtgga cggaaaactt tcagggatct
      961 ccatcgtgca atggatgccg ttttgagata agtactccac cgcatatgcg cgggtgtaag
     1021 ataagaggtc gctcagcgta tcattctttt cattaagcgc ccaaacgatc tcacccattt
     1081 tgtcgatcat ctcgtgggag tattccctga tcctcgtgat atcttcttca atgggctgtt
     1141 gctgttgctt ttttatcccg atcgtttcgc tcagaaattt tattcttgtt agccccgcgc
     1201 cgagatcgtc atgcatatcg gttgcaattc ttgttctttc cttttctata gcctgccgtt
     1261 tttctaatac tgtcttttgt ttgtcaagtt tcctccgata atagaaacga attgcaagaa
     1321 tcagcacggc gatgaacaac aatgcagcga ttactctaac cggccatgtt tcccaccagg
     1381 gaggggtgat cgcgaacgag taagataact cgaccggtgc ataagcggcg gaaggaaaaa
     1441 aagcttttac tgttaaagta taatttgcgg ccgagaggtt tgtaagattg atcacagaat
     1501 tcgccggact cgtatcactc cattgctgat tgcctgatcc tgccaaccga taagaatagc
     1561 tcacacgatt ttcatcaatg aaactgggag cagctacaaa aaaactgatg ttattttctc
     1621 tatatttaaa actgctttcc ccatttacgg tcggccggcc atttaccctc atctcgtcga
     1681 gcagcaattt gggctcataa gacaagatat cttcgcgcgc ggaagcgagt tgcaaaagca
     1741 tgcccgaaga agtgagcccg tatgcttgtt tctcatctgc ccaagcctgt ttaatgaacg
     1801 caaaaaaatt actgctcttg ctgagatttt ctaccctgta tgaatttgaa ctacgcacga
     1861 tcctgtcgag gcctgtttgc gtaccgacga taatattgtt gagagagtcg caggcaagtg
     1921 tggtaacaaa attgtcagtg aggccgttct ctatattgaa atggtatact tcatttaagc
     1981 ggttcccact gtacccataa gcgaagaggc catcgttgcg cgttccgatc cacattaagc
     2041 catttttgtc ccatgtcgcg catctcggcg agccggtgaa ccggcttgta tcaaaatgca
     2101 atgagtcccg cagataatgt gacggatctt ccgggtgaat actaaaaacg tggacaccac
     2161 tatagcgggt caccgcccac agcatgttgt tactatccag cttaagcgcg tcaaacgttt
     2221 cttttggagt aacgggaaac agaaagatca atttcttatt tttccagacc ccaagccctg
     2281 ttcgctgaga ggaaacaata gctccgtttc gatcgacgac aagttctttt ccaaaaaaat
     2341 cggacgcggg taacgagatg gtctttttaa attcaatcgc atcaccgccc tttagaacag
     2401 attcgtaaat attattgtag tcgtgggcca atagcctgtt tccgtcccgg aagaaaattg
     2461 caggtgcagg attgacattg caaatgaatt tttctgatcc cgtgcttgac ctgcagaaca
     2521 atttattggt attagtgctg taccaggttg acccgtccgc gcaaaagaca ttggcaaccc
     2581 ggccctgcat gggctccgca aacggatttg caaacacgcg cagtggcgta ttaattattt
     2641 tgaatacacc ttcaccgtca ttgcataacc atatcgtatt ttctttgtcg atcatgatgt
     2701 ttccgatatc aaacgaagtc atttgttcgg gcaaagggat ggtaagtaag gtcccgctag
     2761 ccggtatgcg ttgaatttca tcgctgcggt tatctttatt tcgatagacc atccagatac
     2821 tgtttctatc aaacgcaaca ttcacggagg aataagtatt tgcgcgttca tacccggcgg
     2881 gcgggatggt gaaaacaatt tttccccgcg aaagattaac cgggtcaaga acgaaaagct
     2941 tatctgagcg cgtgatccaa atatcgtgga gactgtcctt gcccactatg aaaatatttg
     3001 cgccccgtat gaagtcgcaa atactatcag ccatgatatt atacaaatag aggcctttat
     3061 gagatgacat gtcatcagtc gagagaacta aatagttccc gatgcccgcg atggtgctga
     3121 catacggtat atcgcggccg ttggcagaaa gcgatgatgt attgagttcc agaaattttt
     3181 tgttttctaa aacgaataag ccattgtctg aagcgacata tattttgtgg tcatcatgaa
     3241 gataaaattg gttaacgacg ggacacgtgc ggtcggtttt gttgagcacg ccaagttttc
     3301 cctttacaag cacattcaca aagtagccgc tattggttgc tacaaggaac gaatcatcgc
     3361 cggcttcaaa aatatcgttg accacatcgg aggcgaggcc gttctgggtt gtgtaatttc
     3421 taaaccgtgc gccgtcaaac acactcaatc cgccataagt tataaagtat atccgcccct
     3481 tactgtcctg gaaagccttt ctcacacgac tgttcactaa tccatccttg ggagtgtagt
     3541 gaacaaacgg gtactgacct tcaggcccct cggcttgtgc atatacttcg catacagcaa
     3601 aaggaataag cagtagtagt aggaatgatc taaaccacac atccaaattt aaaaaagaaa
     3661 ttcctcacaa agagtcgagt gccttgcgaa ggaaatgatg atgctgataa attgtcgatt
     3721 aatagcgaac tactcttggt tcaagtggtc tctatgcact gagcgctaat cgggatcttt
     3781 tcgccttcca tgtttatctc tacacgcatc gccttcaatc ctttcacgcc ctggagctct
     3841 tcgagctcga gcagttcaag ccccggcttc aggatatttt tattttgcaa aaactcaatg
     3901 tactcctggt actcctgcaa ttctttttga ttcgaataaa caattgcaat cgtgcccggt
     3961 tgtgtgagtc gttcgcctgt ctcttttgtt cgtgctttat caagcctttt ttttatggtt
     4021 tcgtaacgga tattgtaaga cccctctaca tcaaatcttt tttcatcgct acggaagcaa
     4081 atggtaatgc ttgggctatg gataaggatc aactggcaag tttgaagcgg aactttcatc
     4141 tgaggtagca atgcatgcgt aatgcgtgca gcctcagcca tcgacttcaa ctgccacaag
     4201 cggatatttt tgaggtacag cgtgtcaaat ggacaattcg gcgcgatgga ttgaccgata
     4261 taaatgttgt attcgactcc atcggtacga tacctctcaa aataatgcgg gtaccatttc
     4321 tgtatctgct cttcttcttt ttccaggtat tgcaacacag cattgttgat catggcaagc
     4381 gtttgttcgt actcgtgccg gtaatggtat atctcgctgt ctgtgtcctt tactgtattg
     4441 taataactgt ctattaaaaa ttgcgcctgc ttgttacttt tttgaagatg accgaataca
     4501 ggctgcactt cattttcgat gaattcattt gttctaactt catcttcggt gttcattgcc
     4561 tgtgcgatcg agtgcaaaac atttcctgtt ttaaatttta aaccttcgag caacggaagc
     4621 gacgtgagct cctggagttg gtccagcgtt ttgtctatca ggcctaaatg ttctttcaga
     4681 tctttttgta ttgcctggct tctctctatt gaagaattgc gaatatcgat agccccatac
     4741 aacgggtata cgtcttcaaa aaccactcgc acgttgcatg aattatcacg caaaaagctc
     4801 catgcagctt cggtaaactt ccattccaca gactgctgca gcgcagtaaa tttttctttg
     4861 atcaattgct cgatgcggtt taaaaaaatg tccctgacct tcagcaatgc aactgacaac
     4921 aaaggcacag cgggttcgat tctcgacatt acttcatgtg tcatctggcc gggaacgttt
     4981 gagctcactt ccagcatgcc taatagtccg tcgccatttc gcaaaggata actgatataa
     5041 cttctcgtgc cgcgcgcata aggagctttc aaaaaggtcg cgaagtcaag catttcctgg
     5101 tttatctggc ttataggaat aggctctgcg ccgcgttccg ttaaaaaacg cgtgtacatt
     5161 tggaatgcca tcttatctgc ctcgctgtca gccttccaat ctttgccaac aatgctgtgc
     5221 ttcgtaaatt ctgtttccaa taccatctcg tcattgatct tcacgaatgg catcaaacca
     5281 atttcaatat cgttcaaacc gatcattatc tgcacaacag atttcagttg ttcaattacc
     5341 ggagcatcga actcaccttg ttgcagcagg atctttttac ttgcctcgag cgcctctgtc
     5401 ttcgtaacat cttctgctat ccacacacca aagccctcta tgcggaacag atcaagaggc
     5461 atcgtgtgca attgtttttc gaggtcgaga atcctaaaag tattcatgca cacagcacaa
     5521 tcctgcaacc tcggcaaggt ccccttaagc tgaatatcta tgaacctgcg atcgcaacgg
     5581 atcttgtaat atcttttgag gcctgttgcg gcgtcggcaa ccgggtacac aagcgccggg
     5641 ctctcgttca acctgacacc ataaaacttt tcgagtatat gatcatatat catggaacat
     5701 tcgatcgcct tcagttgttc cgctgacatc cctgcgggca acagcaaccg ttcttctttc
     5761 gcgtccatga acaattcgcg gaaaccatcg gagtagtaaa atacctcaaa ctggtaaggg
     5821 gtcgccaagg caaacgtatt cttttcatgt ttgctcacga ccgggaaaag catcgttccc
     5881 aataattcca atagttccga attttcttct agcacaacca tatcgctgat cgtctgcaac
     5941 aactccggcg tgtcttcaaa cttctttacc aggtatttgt agaagctgga ttttatgttc
     6001 gaaacatccg gagttttttc ttttaaataa ttgatcagtg gaaggaacga aatgttactg
     6061 tcaacatcag gcaacgattg tttgatcgcg ctccccgctg tcatcacttt tgattttttt
     6121 gaaggtatta ggatgggaac aatttcatcg agcatcagga agattttaaa cggttaaaaa
     6181 attggtaggg ccgtcgataa agttagcaat ctttttcgca agacggcgat gtgaagatat
     6241 aaataaaaaa ctccggctga aaaagccgga gtctgtaatt tctctctccc tgcgctggca
     6301 ttactcagat caggttcgat gggtatattc tcagaattgc ttcgcaaaac accccgcgag
     6361 aaatactctt ttaatactta aataatcgtg ccaataaacg tcaacaacct gtcaggattt
     6421 tcaaacctga caggtttcgg aaaatagaaa cgaacacatg cttttttcct gtttaattga
     6481 tgggcttacg ttgggtactc tagttccgtg accttacaga gcttcgcacc ggtcaggtct
     6541 ggaacgccta aatttactgc tgctgtaaaa ttttgaaaga ccgcgaaagc ttttcggcac
     6601 gtcattccaa aaaattattt caattgtaag atcagcaggt ttgcagaagt attactggtg
     6661 acagttgatg cttcgttcag ccagcaataa tgccccgcct tcatcagtcg ctgctggata
     6721 atgccgccc
//
LOCUS       DASQJI010000393        15167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_352154,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000393 DASQJI010000000
VERSION     DASQJI010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15167
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352154"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..979)
                     /locus_tag="VEV83_11090"
     CDS             complement(104..979)
                     /locus_tag="VEV83_11090"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HYK45706.1"
                     /translation="MLYSMTGYGRAEKIIGEKNFLVELRSLNGKQYDIRLTIPALLKP
                     YEFDIRTMINEGLMRGSVECLISLKQNGSEKPAYINTALAKAYFEPMRSLANELALPV
                     ENILSTLLKLPEVIAPSNEVIAEDEWNLFTGVVEEAMNDLNKHRKEEGKSMEDDLLAR
                     IMNIELQQAAIASLEPQRRIKIKEGLQKVLEDNIGKDNYDPNRLEQELIYYIEKIDLS
                     EEQVRLKNHCDYFKDVLKETTIIKGKKLSFILQEIGREINTTGSKAYDSDIQKCVVLM
                     KDELEKAKEQILNVL"
     gene            complement(1245..1907)
                     /gene="phoU"
                     /locus_tag="VEV83_11095"
     CDS             complement(1245..1907)
                     /gene="phoU"
                     /locus_tag="VEV83_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HYK45707.1"
                     /translation="MIQLETELSQLKDEVKNMWEMVRGQLLKALSALLNFDQDLAREV
                     VVMEKRVNATELKIDRDCENIFALYSPVAVDLRFLLAVLKINTNLERTGDIAEGIAKH
                     LLSTDHGFKPELLEATKVIEMYREAIAMLEDTLTAFEKEDTVLARSVFEKDEFLDDIN
                     SRGNELIEEYLKTHAEDMDQALHALSIIRKLERVGDQSKNIAEEIIFYVEAKVLKHIN
                     KV"
     gene            complement(1932..2690)
                     /gene="pstB"
                     /locus_tag="VEV83_11100"
     CDS             complement(1932..2690)
                     /gene="pstB"
                     /locus_tag="VEV83_11100"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HYK45708.1"
                     /translation="MERTIIKSVDFNAYFGDNHAVKNVSMEIPQNHIVSVMGPSGCGK
                     TTFLRCINRMHELIQGATSKGKMLLHDEDVYDMHPIFVRLKIGMVFQRPNPFPNLSIA
                     DNVIAGYKLNGGKLSRSDRERIVEQSLTKAALWTEVKDSLHKKGTFLSGGQQQRLCIA
                     RAIAMEPEVLLLDEPTSALDPISTSSIEELLHELKNSYTLIIVTHNMQQAARVSDRTA
                     FFYLGELVEYDDTKQMFTNPTDKRTQNYITGRFS"
     gene            complement(2672..3520)
                     /gene="pstA"
                     /locus_tag="VEV83_11105"
     CDS             complement(2672..3520)
                     /gene="pstA"
                     /locus_tag="VEV83_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HYK45709.1"
                     /translation="MMKPRIPYRKTKSKAFQVLIVVLAFIITLPLIAIIFYIFKEGIT
                     KINWNFLTNVPKPVGEVGGGIANALLGSFLIVLTASVIAVPIGIMCGIYLSENRRGRL
                     SYWSGLAVDVLQGVPSIVVGIVIYFWLVKPIGTFSAFSGSVALSIMMLPIIIRSTEET
                     LKLIPFSLKEAGLALGLPYHRVILKVIVPCGVSGILSGVMLSVGRIAGETAPLLFTAF
                     GNPYLTADITKPMQSLPLLVFNYATSPYQDWLNLAWGASLILLLWVLLMNIFTKLFTR
                     RWNVQL"
     gene            complement(3523..4497)
                     /gene="pstC"
                     /locus_tag="VEV83_11110"
     CDS             complement(3523..4497)
                     /gene="pstC"
                     /locus_tag="VEV83_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HYK45710.1"
                     /translation="MPKSIISGTAVGLRVPSYREIMDKLRLKKLARPYKQIRWEDFFR
                     RSLAIIALVLVVLVMGIFITLIIESIPCLKALGIKYLWGKTWNPVTNEYGAWPFLLGT
                     LLTSFLALLISIPFSYAVAIYLGEYNPTGWLSSFLKNTVELIAAVPSVIYGFWALVVL
                     VPMVRVIEIKVGVAPYGVGIFTASIILAIMIIPYAASLGREMIRIVPQSLKEGAYSLG
                     ATRYEVIRSVILPYTKSGLFAGVLLSLGRALGETMAVTMVIGNTSIIPTNIFAPGNTM
                     ASVIASQFTEADRTVYLSALIELGLVLFLVTVVINMVGKRIIKRFTRE"
     gene            complement(4507..5619)
                     /gene="pstS"
                     /locus_tag="VEV83_11115"
     CDS             complement(4507..5619)
                     /gene="pstS"
                     /locus_tag="VEV83_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HYK45711.1"
                     /translation="MKYNFSKLQSLFLSTLIIAGLVSCNGGGSSGTAGSTTTDSTSGT
                     GDANTMLGAGSTFIYPLFSKLFSVYNEQTGLKVNYQSIGSGGGILQLTNKTVDFGASD
                     AVLNDEQNQKIGVPVLHIPMASGAVVISYNLADVKDTLKLTPTVLANIFLGKITKWND
                     AAIAAVNAGVKLPNTPIVIAHRSDGSGTTNIFTTYLSKVSDEWNTKVGKGSSINWPTG
                     LGGKGNEGVAGLIKQTPGAIGYVELAYALQNGMSFAKLQNKAGNFITPNIASTSAAGN
                     IQLPADAKVSLTNTDAPEGYPISGFTWALIYQEQNYNGRSQDRASQLVKLLWWNIHEG
                     QQYCSALNYAPLSPAAVTVAENILKTATYDGKPLLP"
     gene            complement(5655..6875)
                     /locus_tag="VEV83_11120"
     CDS             complement(5655..6875)
                     /locus_tag="VEV83_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45712.1"
                     /translation="MQSIKLLAIPAMLTGLCFFTNVDRVYAQKPIADTSFKPGGKLWG
                     LVFGDYYYKSHADTLNRGAVNQYTGLPKNRNAFQLRRVYLGYNYDISKKFSADLVLAA
                     EDNFVQTSNGTTTTSGDLLTDNRLAFYIKQANIRWKNFWTGTDLVVGQVQSPAYAFSS
                     EPVWSYRSIERTLIDVRRTPSTDFGVELQGKFDPKKGNFGYNLMVANGTGARPENDNF
                     KWFYGEVYTKLFDKKVIVDLFADYQRLNWVPAWHHSRAMIKGFIGYTTPELSVGVEGF
                     INNLKQDNFAQRRTDSTFDTLTVKSTGISVFVHGQLVKDKLRFFARYDAFNPNNDIDN
                     SSYIAYKGNTTAYNDPSTKEQFITAGLDFTPAKNIHFMPNIWYVKYTNQGPKALYNSY
                     DLVYRITFYYVYNR"
     gene            7194..9662
                     /locus_tag="VEV83_11125"
     CDS             7194..9662
                     /locus_tag="VEV83_11125"
                     /inference="COORDINATES: protein motif:HMM:NF017754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK45713.1"
                     /translation="MALALVTESRRNIFLTGKAGTGKTTFLKYVREHCQKQIAVVAPT
                     GVAAINAGGATIHSFFQLPLSPFIPEARGFTENKVMNKHSLLGRMRINKEKRKIFQQL
                     ELLVIDEISMVRADTMDAIDTILRYFRNRSHEPFGGVQVLLIGDMFQLPPIIPDAEWN
                     LLSQFYKSQYFFESRVIQQFPPAYIQFEKIYRQADAQFIDLLNQVRHSTLTADMLGLL
                     NSRFNAHFPLSEHDGYVYLTTHNYQADHVNSTQLGKLAGKIFSFKAEVKGEFNEKSYP
                     ADELLQLKIGAQVMFLRNDKEKRFFNGKIGTVASITENSIFVQCSNEEHAIEVGTEVW
                     ENVRYSLDRSSQSLEEEMVGSFSQYPLRLAWAITIHKSQGLTFEKVVIDAGQAFAPGQ
                     VYVALSRCTTLEGIILKSKIAPASLKVDERITNFSKNSVADDQLKEDLIRARKEYEGN
                     ILLNLFDFTTIVNECAELRNTIKDNQAAFNKAALEWIDNLQNKILASQSVAQKFKTQL
                     SKFFDPSSVNSQALQQRLMAASSYFAGQADEMMQLIKTSPAQTDGRQHAKVYNESAKE
                     MFNLLAEKKHLLDCCRTGFSIGNYQQQKKSFSVPAFSLNAYGTSSEQKNTESPHPQLQ
                     RKLRDLRNKICDQKNLPIYYVASGKSIDEMAEYLPQNLDELVKLSGFGKAKAKLYGQQ
                     FLEIITGYCRDHELGSLVHKKRPKRERKGGAGPDEDTRSATYRLYKDGKPIAEIAKLR
                     NLAVSTVESHLEFLVRKGVIAVHEIVKPETLNLIESSLENFEGGSITPIKQKLGDAVS
                     FGEIRIAIAAKDWERQEKVANSAG"
     gene            complement(9755..11161)
                     /locus_tag="VEV83_11130"
     CDS             complement(9755..11161)
                     /locus_tag="VEV83_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HYK45714.1"
                     /translation="MQKVNRTQLAPFLILILVAVGAIFVPSVADFADTSKYNFADIAW
                     VLVATALVFLMTPGLAFFYGGMVHRKNVISTMIKSVVAAGVVTILWIVVGYSLCFGPT
                     LGGFIGNPMTHLFFKGVNSGAPWSLGPTIPLTLFALFQLMFAIITPGLVVGAVAERIR
                     FASYILFIALFSLLVYAPIAHWTWNPEGFLFKMGVLDFAGGTVVHISAGCAALAGALV
                     LKRRKVHIEHKEIPPANIPYVLIGTGLLWFGWFGFNAGSALAANSLAVSAFATTNTAA
                     AAAGLTWMFLDVAQGRKPSVVGFCVGAVVGLVAITPAAGYVAIPQSIFVGFIAAVVSS
                     MAVKIRAKSRLDDTLDVFPCHGIGGMVGMLMTGVFATKAVNAAGNDGLLFGNIAFFLT
                     QLKALAIVVAYSFTVSYAIFKFINYVLPLRVSAEDEILGLDATQHNEKYLQGSLLVHN
                     GGEMEETLVEVEPTSVPS"
     gene            complement(11273..12733)
                     /locus_tag="VEV83_11135"
     CDS             complement(11273..12733)
                     /locus_tag="VEV83_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HYK45715.1"
                     /translation="MGKPTGFIEFERELPVKKPVQERIKNFHEFISDYADEKLNNQAA
                     RCMDCGVPFCHSGCPLGNIIPEFNDAVYRKNWKEAYEILNSTNNFPEFTGRICPAPCE
                     SACVLGINQPPVTIEEIEKHIIEIAFKNGFVQPKKINLRTGKKVAVIGSGPAGLAAAA
                     QLNYAGHHVTVYERDDAPGGLLRYGIPDFKLEKWVVDRRIDLLQQEGITFKCNAHIGV
                     NIDPTEIFNSYDAVILAGGSTVPRDLKIPGRDLHGVYFAMQFLKQQNKRNAAKDPFAN
                     ADIESNIFQESISAKDKNVIVIGGGDTGSDCIGTAKRQGAASITQIELLPKPPASRTD
                     HMPWPLYPMLLKTSSSQEEGCEREWAIATKEFLTDNNGKLRALKIVDLNWTITADGKA
                     SGYTEIPGTERELPCDLALLAMGFLYPPLEGLLSGLKIEVTDRGNIKTAGKSYQTNIA
                     KIFSAGDMRRGQSLVVWAIHEGRECAKDAHRFLSAT"
     gene            complement(12792..>15167)
                     /locus_tag="VEV83_11140"
     CDS             complement(12792..>15167)
                     /locus_tag="VEV83_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HYK45716.1"
                     /translation="FSKMGISTLQSYQGAQIFEILGLNKDVVDEYFTGCTSRIEGMGL
                     DEIAKEVLTKHFYAFGRKEDGQGRLPTGGVYQWRVKGEYHLFNPQTIHLLQYSTRTND
                     YNLFKKYSALINEQEEKACTLRGLFRFKNDRPSISLDEVEPAENIYKRFATGAMSFGS
                     ISWEAHTTLAIAMNRLGAKSNTGEGGEDDRRYIPLANGDSMRSAIKQIASARFGVTSL
                     YITEADELQIKMAQGAKPGEGGQLPGHKVDDWIGRIRHATPGVGLISPPPHHDIYSIE
                     DLAQLIFDLKNANRHARVSVKLVSKAGVGTIAAGVTKAKADVVLIAGHDGGTGASPVS
                     SIRHAGLPWELGLAETHQTLVRNKLRDRVVVQADGQMKTGRDIAIAALLGAEEWGIAT
                     AALIVEGCIMMRKCHLNTCPVGVATQDEQLRKLFTGDAEHVINFFKFITQELREIMAE
                     LGFRTVNEMIGQADRLEARPNVSHWKYKQLDLSAVLYKEPASFNTSFYCSEKQEDVLK
                     GVLDWKLLDAAKAAIDHGKKVFSEFDIRNTDRTTGTIVSHEITKKYRAEGLPPDTIHF
                     KFTGTAGQSFGAFNTRGLTLELEGDANDYFGKGLSGARLIVYPPQRAKYIPEENIIIG
                     NVALYGATAGEVFIRGKAGERFCVRNSGAQVVVEGVGDHGCEYMTGGIAVILGNTGKN
                     FAAGMSGGIAYVYDVNGTFRQNCNKEMVDLDPLDEEDEHRLHQLLQKHFSVTGSSVAK
                     FMLDDLENQLKNFIKVFPKDFKKVLAERKANAESRSAESILHGIKNLENKI"
BASE COUNT         4109 a         3495 c         3295 g         4268 t
ORIGIN      
        1 gccgtggaag cggagctgtt ttttcataca catccagtgt ggtacatgca tgtaacaaca
       61 tgatcagaag aacaacgacc gtgtatgttc tcaaggacat ttcctaaagc acatttaata
      121 tttgttcttt ggctttctcc agttcgtctt tcatcagcac cacgcatttc tgtatgtctg
      181 aatcgtaggc cttggacccg gttgtattta tttcacggcc tatctcctgt aggatgaaag
      241 aaagcttttt cccttttatg atcgtggttt ctttcaacac atccttaaaa taatcgcaat
      301 ggttttttaa acgaacttgc tcttcactta ggtctatttt ttctatgtaa tagataagtt
      361 cctgctcaag ccggtttgga tcataattgt ctttgccgat attatcctcc aatacctttt
      421 gcaaaccttc tttgatctta attctgcgct gcggttcaag tgatgcgatg gccgcctgtt
      481 gcaattctat gttcatgatc ctggcaagaa gatcatcctc catgctcttg ccttcctctt
      541 tacgatgctt gttgaggtcg ttcattgcct cttctacaac gccggtgaat aaattccatt
      601 cgtcttcagc aataacctcg ttggaaggcg cgatcacctc cggtaactta aggagcgtgc
      661 ttagaatgtt ttccactggc agagccaatt catttgcgag ggaccgcatg ggttcaaagt
      721 acgctttcgc cagcgctgta ttgatgtatg cgggtttttc ggagccattc tgtttcaggc
      781 tgatgagaca ttcaacgctg ccccgcatga gaccttcatt gatcatagtt cttatatcga
      841 actcatacgg cttcagcaac gcgggaatcg ttaagcggat atcatactgc ttcccgttta
      901 acgaacgtaa ttcaaccaaa aaattttttt cgccgattat tttttctgca cgcccataac
      961 ccgtcattga atacagcata atgaaatttt gttattctta caaagaaaag taattatctg
     1021 taagcttgcc attcatcgtt atgtaatgcg acaaaaaaat aataccatgg atatgtgtac
     1081 cgggcgttat gacaagcctt atgttcagat cgggaaaata aaaaagccct gctggaaagc
     1141 aaggctgcat agaatctcta acttaaatgc tatgaacccg gtgtaaaaat gcgtttataa
     1201 gatgaacaaa cggccaaccg tatgttatga gtgcatgaat tcttttacac tttgttgata
     1261 tgtttgagca cttttgcctc cacatagaaa ataatttctt ctgcgatatt tttcgactgg
     1321 tcgccgacgc gttctaattt cctgataatc gaaagagcat gcagtgcctg gtccatgtct
     1381 tcagcatgcg tttttaaata ttcctctatc agttcatttc cgcgcgaatt gatatcgtct
     1441 agaaattcat ctttttcaaa aacgctcctt gccaaaacgg tatcttcttt ttcaaacgct
     1501 gttagcgtgt cttcgagcat ggcaatagct tcgcggtaca tttctattac tttggttgct
     1561 tcaagcagtt ccggtttaaa gccgtgatcg gtgctgagaa ggtgctttgc gatcccttcg
     1621 gcaatgtcac ccgtcctttc aagattagta ttgatcttta ataccgccag aagaaaacgg
     1681 aggtcaacag caaccgggct gtaaagggcg aagatgtttt cacaatcgcg gtcgatcttt
     1741 aactcagtag cattgaccct tttttccatt acgaccactt cacgtgcaag gtcctggtca
     1801 aaattcaaaa gggctgagag ggcttttaat aattgcccgc ggaccatctc ccacatattc
     1861 tttacttcat cttttaattg actgagttcg gtttctaact gtatcatatc aaatttttct
     1921 gccgcacaaa tttaactgaa tctgcccgtg atgtaattct gcgtgcgttt gtctgttggg
     1981 ttcgtgaaca tttgttttgt atcgtcatat tctaccagtt cacccaggta aaaaaatgct
     2041 gtccggtcgc tcacacgcgc agcttgttgc atgttgtgtg taacaattat cagcgtgtaa
     2101 gaattcttta gttcgtgcaa taattcttca atgcttgaag tggagatagg atccagtgcc
     2161 gacgtaggtt catccagcaa taaaacttca ggctccatcg cgattgcacg tgctatacat
     2221 aaacgttgtt gctgaccgcc cgacagaaag gtgccttttt tgtgcaagga atctttcact
     2281 tcagtccaca acgcagcctt tgtaagtgat tgttcaacga tgcgctccct gtctgacctc
     2341 gaaagcttac cgccattcaa tttatacccg gcaattacat tgtcggcgat gctcaggttt
     2401 ggaaaagggt tcggtcgctg aaaaaccatc ccgatcttca gtcgcacaaa aattggatgc
     2461 atgtcatata catcttcatc atgtaacagc atttttcctt ttgaggttgc gccctggatc
     2521 agttcatgca tgcggttaat gcaacggagg aaagttgttt tgccgcagcc tgaagggccc
     2581 atcacagata caatatgatt ctggggaatt tccatgctca cattcttcac cgcatgattg
     2641 tcgccgaagt atgcattaaa gtccacgctt tttataattg tacgttccat cgtcttgtaa
     2701 agagcttagt gaagatattc atcagtaaaa cccacagcaa caaaatgagc gaggcgcccc
     2761 aggcaaggtt aagccagtct tgatatggac tcgtggcata attaaaaacc agtaatggaa
     2821 ggctttgcat aggctttgtt atgtcggctg ttaaatacgg attgccaaag gcggtgaata
     2881 gaagtggagc cgtttccccg gcaatccttc caacagacaa cattactccg gaaagaatac
     2941 cgcttacgcc gcagggtacg atcactttta gtatcacgcg atgataagga agcccgagtg
     3001 caagtcccgc ttccttcaat gagaacggaa ttaattttaa tgtttcttcg gtagaacgga
     3061 tgataatggg caacatcata atcgatagag caacacttcc ggaaaatgca gagaaagttc
     3121 cgattggttt tacaagccag aaataaatta cgatgccaac cacgatcgag ggcacgcctt
     3181 gcaaaacatc caccgctaat ccactccagt atgaaagccg gcctcttcta ttttcactca
     3241 ggtatatccc gcacataatt cctattggta cggcaattac tgatgctgtg agaacaataa
     3301 gaaaactgcc aagaagtgca ttggcaatgc ctcctccaac ttcccccacc ggtttgggca
     3361 catttgtaag aaaattccag ttgatcttag tgatgccttc tttgaaaata tagaagataa
     3421 tggcgatcaa tggcaatgtg ataatgaacg cgagtacgac gatcaatacc tggaaggctt
     3481 tgctttttgt ttttcgatat gggatccttg gcttcatcat atctattccc tcgtgaatcg
     3541 tttaataatt cgtttgccca ccatgttgat aacgaccgtc acaagaaata ataccagtcc
     3601 caattcgatc aaggcagata agtagaccgt acgatcagct tcggtaaatt gactcgcgat
     3661 cacgcttgcc attgtgttgc cgggtgcaaa tatgtttgtt ggaattatgc tcgtatttcc
     3721 gatcaccatt gtgacggcca ttgtctcgcc taatgccctt ccaagggata ggagaacgcc
     3781 tgcgaacaac cccgattttg tataaggtaa aatcacgctt cttatcacct cgtatctcgt
     3841 ggcacccaac gagtaagcac cttctttcaa tgattggggc actatcctga tcatctctct
     3901 tcctaacgaa gcggcataag gaatgatcat gattgcgaga atgatggatg cagtaaaaat
     3961 gccaacaccg tacggggcaa cgccaacctt aatttcaata acacgaacca tcggcacgag
     4021 tacgaccaat gcccaaaatc catagatgac ggatggcact gcagcaatca attcaacagt
     4081 atttttcaaa aaactggaca gccaacctgt tgggttgtat tctcctaaat aaatagcaac
     4141 ggcatacgag aaaggaattg aaattagtaa tgccaggaat gaagtcaata aggtgccgag
     4201 caaaaatggc caggcaccat attcgtttgt taccggattc catgtttttc cccacaggta
     4261 ttttatacca agagccttca aacaaggaat tgattcaata atgagcgtga tgaaaatacc
     4321 catcaccaac acgaccaata ccagtgcgat gatagcgaga gagcgcctga aaaaatcttc
     4381 ccacctgatt tgtttatatg gacgtgcaag ctttttaagg cgtagcttat ccattatttc
     4441 gcggtaggag ggcactcgca atccgacagc ggtgccgcta atgattgact tcggcataaa
     4501 caatttttat ggcagcaacg gcttgccgtc gtacgtcgca gttttcaaaa tattttctgc
     4561 aactgtcacg gccgccggcg aaagtggtgc ataattcaag gcggaacagt actgctgacc
     4621 ttcatggata ttccaccaca aaagcttaac gagttggctt gcccgatcct gggagcgtcc
     4681 attatagttt tgctcctggt aaataagcgc ccatgtgaat ccgctgatcg ggtatccctc
     4741 cggcgcgtcg gtattcgtta atgatacttt cgcatcagca ggcaattgga tgtttcctgc
     4801 cgcgcttgtg gaagcgatat tcggcgtaat aaaattccct gctttgtttt gcaacttcgc
     4861 gaagctcata ccattttgaa gtgcgtatgc caactccacg taacctattg cgccgggagt
     4921 ttgttttata aggccggcga ctccttcatt cccttttcct cccaaaccag tgggccagtt
     4981 gatggaagaa ccttttccaa cttttgtatt ccattcatca cttacttttg aaagatatgt
     5041 tgtgaagatg ttcgtggtac cgcttccatc ggaacgatga gcgataacga tcggcgtatt
     5101 cggcaactta acgcctgcgt tcacggctgc gatagcagcg tcattccatt ttgtgatctt
     5161 cccgaggaaa atatttgcaa gaaccgttgg cgtaagtttc agcgtatcct ttacgtcggc
     5221 gaggttgtaa cttatgacta cagcgcctga tgccattgga atgtgcaaaa ccggaactcc
     5281 gatcttttga ttttgttcat cattcagtac cgcgtctgaa gcgccaaaat caaccgtttt
     5341 gttggtcagt tgcagaatgc cgccacctga gccgatagat tgataattta cttttaatcc
     5401 cgtttgctcg ttgtaaacgg aaaataactt tgaaaacaac ggataaataa aagtactgcc
     5461 cgcaccaagc atggtgttcg catcgccagt tcccgatgta ctgtcagttg ttgtgctgcc
     5521 agcagtgcca gatgaacctc cgccattgca agaaacaagg ccggctatga tcaacgttga
     5581 gagaaataag ctttgaagtt ttgaaaaatt gtatttcatg tgttgtagtt tgaattttac
     5641 aagaatcgat tggtctacct gttatagaca taatagaaag taattcgata cacaaggtca
     5701 taactgttat aaagggcctt tggtccctgg ttcgtgtatt ttacatacca gatattgggc
     5761 atgaagtgta tgttctttgc aggtgtaaaa tcgagccctg cagtaatgaa ctgctctttc
     5821 gtggatgggt cattatatgc tgttgtattt cctttataag cgatgtatga actgttgtcg
     5881 atatcattat ttggattgaa tgcgtcataa cgtgcaaaga acctgagctt atccttaacc
     5941 aactgaccgt ggacaaacac agatatgccg gttgatttta cggttaatgt atcgaacgtg
     6001 gaatctgttc tgcgttgagc aaagttgtct tgctttaagt tgttgataaa tccttccacg
     6061 ccaacggaga gttcaggcgt ggtataacca atgaatcctt ttatcatggc gcggctatgg
     6121 tgccatgccg gaacccaatt gagacgttgg taatcagcaa acaaatcaac gatcactttt
     6181 ttgtcaaaaa gttttgtgta cacttcgccg taaaaccatt taaagttgtc attttccggt
     6241 cgggctccgg tgccgtttgc caccataaga ttatatccga aattgccctt tttcggatca
     6301 aatttgcctt gcagctcgac gccgaagtcg gttgacggtg tccgtcgtac atcgataagc
     6361 gttcgttcga tcgaacgata actccatacc ggttcagaac taaaagcata agccggggac
     6421 tgcacctggc ctaccacgag atcagttcct gtccagaaat ttttccatcg aatatttgct
     6481 tgctttatat aaaacgccag cctgttatct gttaacagat ctccggatgt tgtggttgtg
     6541 ccgttgcttg tttggacgaa attatcttcc gcggcaagca cgagatcagc gctgaatttc
     6601 ttgcttatgt cgtagttgta ccccaggtaa acccgacgca actgaaatgc atttctattc
     6661 tttggcagcc cggtgtattg attgactgca ccgcgattga gcgtatccgc atgactttta
     6721 taatagtaat cgccaaagac gaggccccaa agttttccgc cgggtttaaa gcttgtgtcg
     6781 gcaattggtt tttgcgcata gacgcggtcg acattcgtaa aaaaacaaag gcccgtaagc
     6841 atagccggaa tagctaataa ttttatcgat tgcatatatt taattttgat gcaaaggaac
     6901 gttttgcatc ttttccctga tgcaaaggaa agagcgcaac attatcccaa tgttaagtga
     6961 aggttacggg aatgttacca aaatggcgcc tgcagaccgg cggtttagtc cggatgaggg
     7021 gcagaggata aaaatcggga acgtttatta atattaaata acttcgaagt tcaacccatt
     7081 tcttagatgt ttacgctacg agttcttact actctttata attgcataag tatttcactt
     7141 tttcatacct aaaccaaatg caagcaatag accataacaa ccaaacattt caattggcct
     7201 tagcgctagt aactgaaagt cggagaaata tttttttaac cggcaaagca gggacaggga
     7261 aaactacatt tcttaaatat gtgagagagc attgtcaaaa acaaatagcc gtcgtagctc
     7321 caactggggt tgccgcgatt aacgccggcg gcgcaacgat ccattcattt tttcagcttc
     7381 cgttgtcccc gtttattccg gaagcgaggg gcttcacgga gaacaaagta atgaacaagc
     7441 atagcctatt gggcagaatg cggatcaaca aagaaaaacg aaaaattttt caacagctgg
     7501 aattacttgt catcgatgaa ataagtatgg tgcgggctga taccatggat gcgatcgata
     7561 cgatcttaag atatttccga aacaggagtc atgaaccgtt cggtggagta caggttttgc
     7621 tgatcggcga catgtttcaa ttacctccga ttattccgga cgccgaatgg aacttgcttt
     7681 cgcagtttta caagagtcaa tacttttttg aaagccgcgt catacagcaa ttcccacctg
     7741 cttacatcca gtttgaaaaa atttatcgcc aagcggatgc gcagtttatc gatctgctga
     7801 accaggttcg tcatagcact ttaacggcgg atatgctggg attgttgaac agtcgtttca
     7861 acgcccactt cccgttaagt gagcacgatg gatacgttta cctgacgacg cataattacc
     7921 aggccgacca tgttaattct actcaattgg gcaagttggc cgggaaaata ttctccttta
     7981 aagccgaggt aaagggcgag ttcaatgaga agtcatatcc ggcggatgaa ctgctgcaac
     8041 taaaaatcgg cgcgcaggtg atgttcctgc gaaacgataa agaaaagcga ttttttaatg
     8101 gaaagatcgg tacggtagcg agcataacag agaattcaat ttttgttcag tgtagcaatg
     8161 aagagcatgc catcgaagtc gggacggaag tttgggaaaa tgtcaggtac agcctggaca
     8221 gatcaagtca gagtttagaa gaagaaatgg tcggttcgtt ttcgcaatat cctttaaggc
     8281 tggcatgggc gatcaccatc cataaaagcc aggggctcac ttttgaaaag gtagtcatcg
     8341 atgcgggaca ggcctttgcg cccggacagg tttacgttgc actcagcagg tgcacaacgc
     8401 tggaagggat catcctcaaa agcaagatcg caccagctag tctgaaggtg gatgagcgaa
     8461 taacaaactt ttcaaaaaat tccgtcgcgg acgaccaact gaaggaagat ctaatcagag
     8521 cgaggaagga atacgaaggg aatattttgt tgaatttgtt tgactttact accattgtta
     8581 acgagtgcgc cgaactgcga aatacgataa aagataatca agctgcgttc aataaggctg
     8641 cattggaatg gatcgacaac ctgcaaaaca aaattttggc ttcgcaaagt gtggcacaga
     8701 agttcaagac gcaactcagc aaatttttcg atccttcatc ggtaaacagc caggctttgc
     8761 agcaaagact gatggcggcc tcatcttatt tcgccggcca ggctgacgag atgatgcaac
     8821 tcatcaaaac ctcgcctgcg caaacggatg gcaggcagca tgcaaaggtg tacaatgagt
     8881 ctgcaaagga aatgttcaac ctgctggcag aaaaaaaaca tttgttggat tgttgccgta
     8941 caggtttcag catcggcaat tatcagcagc aaaagaaaag cttttcagtt ccggctttca
     9001 gtcttaatgc gtatggaact tcatccgagc aaaaaaatac tgagagcccc catccgcaac
     9061 tgcaaaggaa attaagagat ctccgaaata aaatatgcga tcaaaaaaat ttgccgatct
     9121 attatgttgc atcgggaaag agcattgatg aaatggcaga atatcttccg caaaacctgg
     9181 atgagctggt gaaattaagc ggatttggaa aagcaaaagc aaagctgtat ggtcagcagt
     9241 ttcttgaaat aataaccggt tattgccgcg atcatgaact cggttccctt gttcataaga
     9301 aaaggccaaa gcgtgaaaga aaaggcggag ctggaccaga tgaagatacc aggtccgcaa
     9361 cgtatcgatt atataaagac ggtaagccga tcgcggaaat cgcaaagctg cgcaacctcg
     9421 ctgtttctac agtggaatcg cacctggaat ttcttgtgcg aaaaggagtt attgcggtac
     9481 atgaaattgt aaaaccggag acgctcaatt tgatcgaatc ttctttggaa aatttcgaag
     9541 gtggttccat aacgccgatt aagcaaaaac ttggcgatgc ggtttcgttc ggtgaaataa
     9601 gaattgctat tgcagcgaag gactgggagc gacaagagaa agttgcgaat tctgcgggct
     9661 gatattattc gatgaaacag gcaagagttt gaaactcttg caaaaaaaga acggctcccg
     9721 caggagccgt tcaaaattcg cacacaaagt gaaactacga tggaacagaa gtaggctcta
     9781 cttctaccaa cgtctcttcc atctcgccgc cattatgaac gagcaaactt ccttgcaggt
     9841 atttttcatt gtgctgtgtt gcatccaggc cgagtatttc gtcttctgca ctcacgcgca
     9901 acggcaaaac gtaattgata aacttaaaga ttgcatatga aacagtgaag ctataggcca
     9961 caacgattgc cagcgccttt agctgcgtta aaaagaaagc gatatttccg aacaacaaac
    10021 cgtcatttcc tgctgcattg actgctttcg ttgcaaacac tcctgtcatc aacataccaa
    10081 ccataccgcc aattccgtgg catgggaaca catccagtgt atcgtctagc cgtgacttag
    10141 ctcttatttt tacggccatg cttgaaacta ctgcggcgat aaagccgaca aaaatgcttt
    10201 gagggattgc cacgtaaccc gcagctggtg ttatcgcgac aaggcctaca acagcgccca
    10261 cgcaaaaccc aaccactgac ggttttctgc cttgtgccac atccaggaac atccaggtaa
    10321 gacctgcagc tgctgcagct gtattggtag tagcaaacgc ggaaacggca agagaatttg
    10381 cagcaagcgc tgaacccgca ttgaacccga accagccgaa ccacaacaaa ccggttccga
    10441 tgaggacata tggaatatta gccggtggaa tttctttgtg ctctatgtgc acttttctgc
    10501 gtttcaaaac caatgcgcct gcaagagcgg cacagcccgc agagatatgc acaactgtgc
    10561 ctcccgcaaa gtctaaaaca cccatcttaa acaggaagcc ttccgggttc catgtccagt
    10621 gcgcaattgg agcatagacc aataaactaa acaaagcaat aaaaagaata tatgaagcaa
    10681 agcgaatgcg ttcagcaacg gcccctacca ccagccctgg cgtgataatc gcaaacataa
    10741 gctggaacaa tgcgaataaa gtaagtggga ttgtcggtcc aaggctccat ggtgctcctg
    10801 agttcacacc cttgaagaac aggtgcgtca tcggatttcc aataaatcct cccagggtgg
    10861 ggccaaagca aaggctatag cctaccacga tccacaaaat ggtcacaacg ccggcagcga
    10921 cgacgctttt gatcatcgtt gagatcacat ttttgcgatg caccattcct ccataaaaga
    10981 acgcgaggcc aggggtcatt aaaaatacga gtgctgtagc aaccagtacc catgcgatgt
    11041 cagcaaagtt gtatttgcta gtatcggcga aatctgcgac tgagggaaca aagatagcgc
    11101 cgacagccac gaggatcagg atcaaaaaag gagctaattg agtgcggttt actttctgca
    11161 taacaaacac attttaaaat tactaatgtt tttattatgc gcaaggtaga ataaaaaatg
    11221 tgagtattga atgaaattac tcacatttta ttttctatta tactactgac tgttaggttg
    11281 ccgataaaaa tctatgggca tctttcgcgc attccctccc ttcgtggata gcccagacta
    11341 cgagggattg cccgcggcgc atatcgcccg ccgaaaagat tttggcaata ttcgtttgat
    11401 agctttttcc ggcagtcttt atattgccgc gatcggtgac ttctattttt agtcctgata
    11461 gcaggccttc caacggcgga tacaaaaatc ccatagcaag cagtgcaagg tcacatggca
    11521 attctctttc ggtgcccggg atctccgtat atcccgaagc tttgccatca gcggtgatcg
    11581 tccagttgag atccacaatt ttcagcgcac gcagtttgcc gttgttgtcg gtcaaaaatt
    11641 cttttgtcgc gatcgcccat tctctttcgc aaccttcctc ctgtgaggat gacgttttta
    11701 acaacattgg gtaaaggggc catggcatgt gatcggttcg cgatgccggt ggcttcggca
    11761 aaagttcaat ttgcgttatc gacgctgcgc cttgtctttt tgccgttccg atacaatcac
    11821 ttcctgtgtc gcctccgcca atcacgatga catttttatc ttttgccgag atgctttcct
    11881 ggaaaatatt gctttcaata tcagcgtttg caaatggatc ttttgcggcg ttccgtttgt
    11941 tctgctgttt tagaaattgc atcgcgaagt aaacgccgtg caagtcacga cccggtattt
    12001 tcaagtcgcg gggaactgta gatcctccgg caagtataac cgcatcgtaa ctattgaaaa
    12061 tttctgtcgg atctatatta actccaatat gcgcgttgca tttgaaggtg ataccttctt
    12121 gttgcagtag atcgatcctg cgatcgacga cccatttttc cagtttaaaa tccggaatgc
    12181 cataacgcag taatccgccc ggtgcatcgt cgcgttcata aaccgttacg tgatgtcctg
    12241 catagtttag ttgcgcagcc gccgcaagtc cggcgggacc agaaccaata acagcaactt
    12301 tttttccggt tcttaaattt atttttttgg gttgaacaaa accattcttg aaggcaatct
    12361 cgattatgtg cttttcgatc tcttcgatcg taacaggtgg ttggttgatg ccaagcacgc
    12421 atgcactttc acaaggtgca ggacaaatac gaccggtaaa ttccggaaaa ttgtttgttg
    12481 aatttaatat ctcgtaagct tccttccaat ttttccggta gacggcatca ttgaactcag
    12541 gtatgatatt tccgagtggg caaccactat gacaaaacgg tacgccgcag tccatacaac
    12601 gcgcagcctg gttgttgagt ttttcatcag cataatctga gatgaactca tggaaattct
    12661 ttattctctc ctgtaccggc tttttaaccg gcaactctcg ttcaaactct atgaatcctg
    12721 ttggtttacc cataatagac ttgatgattc ttgagaaaat atgcgttccc gctcaagagt
    12781 tttaatgatt atcagatttt gttttcgaga ttttttattc catgcagaat cgattcggcg
    12841 gatcttgatt ctgcgttggc tttgcgctcg gcaagcactt tcttaaagtc ctttggaaat
    12901 acttttatga aattctttag ctgattttca agatcgtcca gcataaattt cgctaccgag
    12961 ctgcccgtta ccgagaaatg tttttgcaac agttgatgta acctgtgttc gtcttcttca
    13021 tcaagcggat caaggtcgac catttctttg ttgcagtttt gtcgaaacgt gccatttacg
    13081 tcatacacat aagcaattcc tccgctcatg ccggctgcga aattcttacc ggtgttgccg
    13141 agtataacag cgattccgcc cgtcatgtat tcacagccat gatcaccgac gccttcaaca
    13201 acaacctgcg ctcccgaatt gcgcacgcag aatctttcac cggccttacc gcgaataaat
    13261 acttcccctg ccgtggcccc gtacaatgct acattaccga taatgatgtt ctcctcagga
    13321 atgtattttg cgcgttgcgg cggatagaca atgagccgtg caccgcttaa tccttttcca
    13381 aaataatcgt tagcatcgcc ttcgagttcg agcgttaatc ctcgcgtatt gaacgcacca
    13441 aaactttgcc ccgcggtccc tgtaaatttg aaatgaatcg tgtcgggagg cagtccttcg
    13501 gcgcggtatt tttttgttat ctcgtgagaa acgattgtcc cggtggtgcg gtcagtattt
    13561 cttatatcga attcagaaaa tacctttttt ccatgatcga tagctgcttt tgcagcatcc
    13621 aataatttcc aatctaaaac gcccttaaga acatcttcct gtttttcact gcaataaaag
    13681 gatgtattga aagacgcggg ttctttgtac aagaccgccg acagatcaag ttgtttatat
    13741 ttccaatgtg agacgtttgg tctcgcttca agccgatctg cctgcccgat catctcgttc
    13801 accgttctaa acccaagttc ggccatgatc tcacgcaatt cctgtgtgat gaatttgaag
    13861 aaattgatca cgtgctcggc atcgccggtg aacaactttc tcaattgctc atcttgcgtt
    13921 gcaacaccaa caggacaagt gttcaaatgg catttacgca tcataatgca accttcaacg
    13981 atcaacgcag cggttgcaat tccccattct tcagcgccta gtaacgcagc gatcgcaata
    14041 tcacgcccgg ttttcatttg cccgtctgcc tgtactacaa cacggtctct taatttattt
    14101 cttactaaag tttgatgtgt ttcagccaaa cctaattccc atggcaaacc tgcatgacga
    14161 atagaactta caggtgatgc gccggtacca ccgtcgtgac cagcgatcaa tacaacatct
    14221 gcttttgctt ttgtaacacc ggctgcaatc gttcctacgc cggctttact taccagtttt
    14281 acgctcacgc gcgcatgacg gtttgcattc ttaagatcga agatcaactg tgcaagatcc
    14341 tctatcgaat aaatatcgtg atgcggcggc ggcgagatca atccaacacc gggtgttgca
    14401 tgacgaattc gtccgatcca gtcatccact ttatgcccag gcaattggcc gccttcgcca
    14461 ggctttgcac cctgcgccat tttgatctgc aattcgtcag cttccgtgat atacaaactt
    14521 gtgactccaa aacgcgccga agcgatctgc ttgatggcgc tacgcattga atcgccattt
    14581 gcaagaggaa tgtatctcct gtcatcttca ccaccttcgc ctgtgttgct ttttgccccg
    14641 aggcgattca tcgcaatggc aagcgtagtg tgggcttccc aggaaattga tccgaagctc
    14701 atcgcacccg ttgcaaagcg tttataaata ttttctgcag gttcaacttc atcaagagaa
    14761 atggaagggc gatcgttctt gaaccggaac aatcctctca aagtgcacgc cttctcctcc
    14821 tgctcattga tgagcgcaga atattttttg aatagattgt aatcgttcgt tcttgttgaa
    14881 tattgaagca ggtgaattgt ttgcgggttg aaaagatggt attcaccttt cactctccat
    14941 tggtacaccc cgcctgttgg aagacggccc tggccatctt cttttctgcc gaacgcataa
    15001 aaatgtttcg tgagcacttc ctttgctatc tcatccaaac ccattccttc aattcgtgaa
    15061 gtgcatccgg taaagtattc gtcaaccacg tctttgttca gtccaagtat ctcaaagatc
    15121 tgtgcgccct ggtaagattg cagcgttgag attcccatct ttgagaa
//
LOCUS       DASQJI010000394         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2348685,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000394 DASQJI010000000
VERSION     DASQJI010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2348685"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VEV83_11145"
     CDS             complement(<1..747)
                     /locus_tag="VEV83_11145"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase family protein"
                     /protein_id="HYK45717.1"
                     /translation="MVSIGNISLPEFPLLLAPMEDVSDPPFRAVCKDNGADLMYTEFI
                     SSEGLIRDAIKSRQKLDIFDYERPVGIQIFGGDEEAMAMSARIVEAVNPDLLDINFGC
                     PVKKVVNKGAGAAVLKDVELMVRLTNACVRSTSLPVTVKTRLGWDDNSRNIVEVAERL
                     QDVGIKALAIHGRTRSQLYKGQADWRLIADVKNNPRINIPVFGNGDIDSPEKALEYKA
                     RYGVDGIMIGRAAIGYPWIFNEIKHYLRTGD"
     gene            778..>1515
                     /locus_tag="VEV83_11150"
     CDS             778..>1515
                     /locus_tag="VEV83_11150"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYK45718.1"
                     /translation="MCTLPYNFEGANLRMLDYNFPRKPRFSPFSQLAILLMLVGVLFL
                     FSGLVLSVVVSSWLHVPPTGLQEALLKPTNTNITRLLQCATTFFAMALPSYVFARIMS
                     GQGFEYLGFNSALTGKQVFIIVGIVFIGIILSIVLSEVNEAIPISKSAETYFKSLEDE
                     YTKQMIAIANLKTTQDYIISLFIIALLPALFEEMLFRGSLQPVLISVTRNPFAGILMT
                     SVLFSAIHMSYYGFLPRLALGLMIGYVF"
BASE COUNT          355 a          386 c          318 g          456 t
ORIGIN      
        1 atcgcccgtt cgcaggtagt gttttatttc gttaaatatc cagggatatc caatagcagc
       61 acggccgatc atgattccat ccacaccata cctcgcctta tactcaagcg ccttttccgg
      121 tgaatctata tctccgtttc caaacacagg aatgtttatg cgcggattgt tttttacgtc
      181 cgcgatcagc ctccagtcag cctgaccttt atatagttgg ctgcgggtcc tgccatgaat
      241 tgccagtgcc tttatgccga catcctgcag gcgctcagca acctcaacaa tattcctgct
      301 attgtcatcc caacctaaac gtgttttcac ggtcacaggc agcgacgtag aacgaacaca
      361 tgcgtttgtg agcctgacca tcaattccac atcttttaac accgcagcgc cggctccctt
      421 gttcaccact ttcttcacag ggcagccaaa gttgatatca agcagatcgg gatttactgc
      481 ctcgacgatc ctcgcgctca tggccatcgc ttcttcatcc ccgccaaata tttggatccc
      541 gaccggacgt tcatagtcga atatgtccaa cttttgccgg ctttttatcg cgtcgcgtat
      601 gagtccctca cttgaaatga attcggtgta catgaggtcg gcgccattgt ctttacacac
      661 cgcacgaaac ggcgggtcgc tcacatcttc cataggtgcg agcaacaatg gaaactccgg
      721 tagcgatata tttcctattg aaaccattat tatgaatggc agaaattaaa tgcagtcatg
      781 tgcacgttgc cttataattt tgaaggcgca aatttacgta tgctcgacta caattttccc
      841 cgtaagccgc gattttctcc tttttcacag cttgcgattt tgttgatgct tgtcggcgta
      901 ttatttctct tttcaggact ggttctttct gtcgttgtct cttcctggtt gcacgtaccg
      961 ccaactggtt tgcaggaagc gcttttgaag cccacgaaca caaatattac acggttgtta
     1021 cagtgtgcaa ctacgttctt cgctatggca ttgccctctt atgtatttgc ccgaataatg
     1081 agtggacagg gttttgaata tttaggcttc aatagtgcac ttacaggcaa acaagtattt
     1141 attatcgttg gaattgtctt catcggcatt atattaagca ttgttctcag tgaagtgaat
     1201 gaggcaatcc caatctcaaa aagtgctgaa acatatttca aaagcctgga agacgaatac
     1261 acgaaacaga tgatcgcgat cgcgaatttg aagacgacac aggattacat tatttcactc
     1321 ttcataattg cgttgctgcc agctctcttc gaagagatgc tgtttcgcgg atcgctgcag
     1381 cccgtgttga tctcagtaac aaggaatccc ttcgcgggca ttttgatgac gagcgttttg
     1441 tttagcgcca tccacatgtc gtattacggc tttcttcccc ggcttgccct cggcttgatg
     1501 atcggctacg ttttt
//
LOCUS       DASQJI010000395        20262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1580341,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000395 DASQJI010000000
VERSION     DASQJI010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 20262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20262
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580341"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(278..1024)
                     /locus_tag="VEV83_11155"
     CDS             complement(278..1024)
                     /locus_tag="VEV83_11155"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK45719.1"
                     /translation="MILKAIIVDDEPNAREKLQLMIERFCRDVEVFGVARDAEEGLAM
                     IGKHQPDLVFLDIEMPVLTGFDMLKQIPEINFEIIFTTAHDEYAIRAIKFSALDYLLK
                     PIDLEQLQLAIQKAATRKTEKTSTQQYLSLKENLSKPSAMEQLAVPAQTGMLFLKVRD
                     IVYCEADSNYTKIMMLNKQKVVSTRTLKEYEELLTETGFIRIHHSWLINKTHVKQYVK
                     GEGGQVIMNDGTALDVSRRKKEYVIERLKN"
     gene            complement(1055..4168)
                     /locus_tag="VEV83_11160"
     CDS             complement(1055..4168)
                     /locus_tag="VEV83_11160"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK45720.1"
                     /translation="MLTRPILSAFACILFAHGFAQDNVQQSIFNRISEKDGLSNNIVN
                     CIVRDKAGFVWIGTFDGLNRFDGTHFIKFRNDRNNANSLVQNTVHGICLDSSGDIWCA
                     TETGISCYRQNTQTFENFYPGAKQDAYYTDILCDGQGTIWCASSYGLYEYVSSNRSFR
                     QYGENDGKSALTSNAIYKKGLVLSPDKRSLWIATVKGINQFDIKSKKFFNYKNNPQKL
                     ALFDSLIHYPVSFDRHGKLVYGANLLYQYDFSTNTVTSLDVIKSSRTPAGPPNRIFVD
                     SKNRYWISTWGYALFVYDADQKKVEEFYHDPYADFSVAANFFWDAYEDVEGTVWLGTI
                     AGLSYTNSSLMSYRLHQPFKNSEPQSHTAIRRFFEDQQEQWWFTTIDRPYLYHYDRQT
                     QKTDSFDLTFDKDIAKETTAINGFAQNNNCLFLYTSNAVHAFDLKTHRFDEPLVTPLK
                     KVVNDEIIYSLKTFGDTVYLLTDRSGITAWFGKNVIRRIPVRENDFLKHHISQYKASV
                     LTTSGLIYYCFSGLRIARYNIAKNQLDTFSVRMPGNIKIVQEEAVNLDEDASGNLWIS
                     QKSTGLIFYNVRTGETKLWQESDGLVFNHIYAISIDRNNRIWCAAYNKFSVYDVAKNR
                     FQNFAAPLGEATYAYVSKMIHLHNGNILCNVDQTFIEGLPDKLNLDITHQPVLISSLR
                     VFDSVRLLVPTSNIRLKHTENFFSIEFGIVTGLDKSRYHLEYMLDGINDSWMNAGPLN
                     TATFTNVPEKQFVFKVRAVSNDNSWQGTPTELAIAVTPPFYRTTVFRIIAALMFAAFI
                     VWLIRLRINNIRKAEQQKSEFNNMVNEWRLKALRSQMNPHFIFNCMNSIDLYILKNDP
                     DNASKYLNKFAKLVRLILNQSDEMSISLAKELEMLKYYIELEALRFDTPFSYKIQLDD
                     AIDADETLIPSMLLQPYVENAIWHGLRHRRSKGHLDICINKNERVLHCIIEDDGVGRS
                     VAAQINKSRTQHKSKGTKLTEERLQMINLENEDRTVVKIVDLTNETGDAAGTRVEIDI
                     VADFEDS"
     gene            complement(4263..5552)
                     /locus_tag="VEV83_11165"
     CDS             complement(4263..5552)
                     /locus_tag="VEV83_11165"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45721.1"
                     /translation="MKNILSLALFVTNVCIAQTTNSGSIIIDSSTKMVVQNNLVNAGS
                     GIIKVDGELRLKKDFINNASTNGFDKADGKVTFNGGSQKIGGSHITSFPLLQLSGTGT
                     KTLNQSIEVGNTASITKHVLNISSVQLLLSTKELTILSSSSQAIQRTTGFIVSETSSL
                     QGCGYVNWKIGQQKNTSYLVPFGNNVTGDFLPVSLTITKAGSGINGLVRFATYPTATN
                     TLPNNRPLPATVTNMNNTFNVDNSAQSLDRFWIIEPQQYSIDPQASMFATYRDAEWDN
                     SGGSTNTITEPDLRLQYWDGTKWSIANGSVNTTTNQVNSDSNVLNKTFWSAAMTVNQL
                     TQQNPSRDESLSSKVSLNVSLYPNPATNFISVNLNQTITGTWQVSVANVRGQVMLRSS
                     FTGGTKQLDVSGLVAGTYTLALFNSNGDTHTFKFIKL"
     gene            complement(5606..7060)
                     /locus_tag="VEV83_11170"
     CDS             complement(5606..7060)
                     /locus_tag="VEV83_11170"
                     /inference="COORDINATES: protein motif:HMM:NF025670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45722.1"
                     /translation="MKKLLTIAVCFLSVIFIKTNAQVAINNDGSSADATAMLDVKSTA
                     KGVKFPRMTTAQRNAIPTTINDGGLMVFDTDDGGLYMFDGSQWIPFAYTKPNPLEQMK
                     SKSATGASASSYLGRSCDMSGDYAVAGAENDSVGANVGQGSAYVFKKVNGNWVQQARL
                     IADDGAKDEKFGSSVAIDGSYIVVGAPDANAHIGALYVFLRNGDTWTQQAKIVPVGGK
                     VFSYYGGCVDIEGSTIITGAVSEDVNGNSSQGCAYVYTRSGTSWSLKTKVIANDGQAA
                     DAFGASVSIYGSYIAVGATDVKVNAIKCGAAYVFVANRAGGYTQQGKLLSNTPTDGSY
                     FGASISLDSNKVVVGSMYEMNEGATTGSAHLFTRTISTWTHNKTFYPSTTSFDLHFGW
                     NLMIKGDMLMICASNEAMGGNEDQGCVYLYKYNPQYLAFSLVKRITDNSNTQSFEGFG
                     ESVAFDGLNYMIGAPYTSRYPQAGQGLIFFGTFQ"
     gene            8678..9946
                     /locus_tag="VEV83_11175"
     CDS             8678..9946
                     /locus_tag="VEV83_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45723.1"
                     /translation="MKSCVLLLVLLPLSLPTFAQLAVPDSIYSPVTTTDAKAQRHRYL
                     LDTMIRQYLEDPLNDDNEGEWNEALWAIELLQYKDEYTTEKLGIAWRMAPQLSEYFQK
                     NLLETTYSLYKKEFKAQVLQLMQQTKSVSVFIRCAEYILRADPVNGKPIVASSMKRTF
                     PGNSSTGLQILQTRLTTTPQPIPPLKDILGSKFLTGQTVIYSLQRANRDYAGLVLIRK
                     PDGTFLKDISGGYFHTSQLARAITAYPYYITNGNTPQGILRFSGFDVSRLLYIGPTQN
                     LQLQIPYEITPDAFFNDSTLIDTPWSKQLYASLLPASWKNYSSIYESFYAGKMGRTAI
                     IMHGTTIDPEFYRAQTYYPQTPSLGCLCSYEEWNDAGYRVNSNQQKIVDALNAIGSSD
                     GYVVVIDIDNKKKNVTIDEVKSLLDKLIEE"
     gene            10126..11355
                     /locus_tag="VEV83_11180"
     CDS             10126..11355
                     /locus_tag="VEV83_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45724.1"
                     /translation="MKTGKVPQQLLLFACGIALLMLNACSKEHGETTTYKILSPVYED
                     RSTALAALNGRADQSFLHTGKIYVKDNFIFINEIDKGIHVIDNTNPSHPRQIAFLRIP
                     GNEDIAILGNILYADMYADLLAIDITDVTKVHLTASLNNFFTGRQFVNGYQTTGDQVI
                     TDWIEKDTTAPLNPPGNCLACQLMLASAAAGPVGQAGSMAKMVLLNNYLYAISEAHSL
                     GIASVTNAKSPHFEGSMFAGYDLETIYPFEDKLFLGSDVGTFMYDVSNPVQPLSIGTF
                     EHGRACDPVVTDGSYAYVTLHAGTNCGGDENELDVVDVRNIEQSVLVKAYPMTKPTGL
                     CQDGKLLFVCDSTVVKIFDTTDPSALQLLNQISCNSPYDVIARNKIAMVVNNEGLFQF
                     DYTDLNNIRQLSFLSEK"
     gene            complement(11376..12635)
                     /locus_tag="VEV83_11185"
     CDS             complement(11376..12635)
                     /locus_tag="VEV83_11185"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK45725.1"
                     /translation="MQYYNVHSHTFTMTNAPRRFLHLYLPDFVADAVDKITNTQPGTV
                     SVEFLLSKLGGNGGKRYASFLKIGKSKNQAEVFDALMNSYTDDQAMKFVALTMNMEYC
                     GAGPSTSGFEGQLEEVLNIKRRYPNRLLVFLGLDPRWAAGQRSIKEKVEQYFSTPLKI
                     NDTTSVNPFCGIKIYPSMGYYPFDQRLMETFEWAAVHNVPVLSHCYYLGGIYNNDEKY
                     LRENLSAADPYSSTTFNGDYVKERGFWRWLLGTKNSNNNLDSCSYFMEPNSFVSMMDH
                     FKAKGTPLKLCLAHFGGGNQMKDRNSNDAPFGAARRNWFLQVKDMLLKYDTLYTDISY
                     ALHDQDIFPTIFDELNHPSYGDRIMFGTDFFLTEREQEENKTYSNFKTAAKARTLPNF
                     DHINAWDQAASKSVAKFLKSDFYDPAS"
     gene            complement(12645..13631)
                     /locus_tag="VEV83_11190"
     CDS             complement(12645..13631)
                     /locus_tag="VEV83_11190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45726.1"
                     /translation="MNLFNFPVINIALAIIITWALFAIFCSLVYEAFAQLKAERGRFM
                     KKYILLQLQDFPNGVNWGSLLYMHGNVDMLSRAPGKPSSDIQPCLFAETLIDVVATAH
                     LVQTQRLPADLEHVSNGNVSYANGTLANFKKATQTLLPSDVMMFLTQALKSAELNSMQ
                     NESIDESVIYKKLVANIENWYTELTQRLTLWYKKKTRKYLFVIGAVLAFIVNVDSVQL
                     FGVYRDYPAKSQAVTSFYNSNAGQIQSDSTNLKILLDKFGALQKETLLPVGYDFSAIH
                     LATLDKTIRQPQIHEKRYWLWKIIGVLISGFAASFGGPFWFDVLKKMYSKNS"
     gene            complement(13679..13936)
                     /locus_tag="VEV83_11195"
     CDS             complement(13679..13936)
                     /locus_tag="VEV83_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45727.1"
                     /translation="MCKFSIPFDGNADDILMGAGQQIVNAGGVFNRASAAHGDFSIGT
                     PLGKVEGTYRVKQQSFDIEITDKPLFVSCDRIEKELRDRLK"
     gene            complement(13965..15449)
                     /locus_tag="VEV83_11200"
     CDS             complement(13965..15449)
                     /locus_tag="VEV83_11200"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HYK45728.1"
                     /translation="MPITDFTIDLHTHPNYKAFGRSFRTTPGTQSNSSSDRSSLWFYD
                     APTFVDKLLNDVGGITKFSQTNMAAAAYGRLAVIVVAMGSIEKWFFNNRSGTGLLADI
                     LEDFATEMGKPRIDVIQGMEDYFSDLMLEFGFMTAMHNVTVKVDGTKYQYRIVNNFQE
                     LNAAMEENTAKIENRLDNQPFVIAVILSIEGLHVLNCGIDPDRGPTNIRANAEQVKQH
                     ARDLKNQPVRPWFITFAHHFYNELCGHSQSLRGLVATKCDQDVGLNTGFTPLGREVLD
                     ILLDDTEGKRILIDIKHLSPQARQEFFQIRQQKYPGIPIFMSHGVANGLPDMNTPFSK
                     YPEIGNTLNNGEINFYDDELLLMARSGGIIALQLDERRLASEETVKRVKHSFFRNKIM
                     HYRSQLLWNQIQYIAELLDDNGLYAWGNIGIGSDYDGIVDPLNSFWTVEQYPELKSYL
                     ERHAFNYIQNNSGRLKNTFNRISADVIVQNVFQTNAWTFLERWF"
     gene            15780..17135
                     /locus_tag="VEV83_11205"
     CDS             15780..17135
                     /locus_tag="VEV83_11205"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYK45729.1"
                     /translation="MTMRTYSTLFILSVFFFVSCKKNVDQTESVPPVDTTSAQYITND
                     SALQITREVYLWNTQIPADFDPGAYADPAEEMVGIRAYSMQTGFAQPVDRFSFAIKQS
                     DWNDISSGVGADFGMSVFFNSPYDLRVKYAEQSSPSGRAGIQRGWRIIRINGNSNIDT
                     SSSSINMIVDAVFYSSQTSFTFKKPDGTTANITLTAKKYKTHPIFADSVYKVDNNRVG
                     YLVLNSFLGDTTEINNEFKSIFSKFAQQNVNQLIIDIRYNGGGYVSLAEKLANYLVPN
                     NGDHQVMYKETFNSNLSDYDETALYDKLSSVNVDNIFFIVSDNTASASELLINALKPF
                     VSETLVGPSTHTYGKPVGFFPIPVSDWYIFPVSFKTVNKDGNGDYFTGFTIDHPVADG
                     VDKNWGDRNESCLNSVLTYIQTGVFGVVQGNVNISGSSANQKINKKAFKGAVGKKDRK
                     R"
     gene            complement(17167..18471)
                     /locus_tag="VEV83_11210"
     CDS             complement(17167..18471)
                     /locus_tag="VEV83_11210"
                     /inference="COORDINATES: protein motif:HMM:NF017396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070008 - serine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S28 family serine protease"
                     /protein_id="HYK45730.1"
                     /translation="MKSLFVFFFFFCLSQLRAQSDELALERALYDLPGVQFKKISNPG
                     DKYLRYALQIKQPLDHQHPEDGYFYQSAVLIHKGFERPVVMETEGYELYPGEDEIADI
                     LNANDIDIEFRYFGQSRPETLQWQYLTFAQACADLHHVNELLKTIYSGKFVSTGISRG
                     GQTSIYYKYYYPDDVNVTIPYVAPLPNSLEDKRIYKFLDTMGSQECRDRIFNFQKFML
                     THENEMLEKLKWYEKGTGETYNYFGGLGGVFEIAVLEYPFSFWQTGFTPCEQIPVNAS
                     VDVYLDHFLKISPIDWMSDKGLAQLVVHNYMARTEMGYYGYDITRFKTYLHYISGQNP
                     SAALAPKYLSYAPFDTTFTHNVHAWLNEKGNNMLYIYGGRDTWSACRVIVSNRVNSKS
                     FMIPGANHFQARVRNMPPDMRKDFAASLQQLLNVEVDLDALK"
     gene            complement(18575..19330)
                     /locus_tag="VEV83_11215"
     CDS             complement(18575..19330)
                     /locus_tag="VEV83_11215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45731.1"
                     /translation="MAQQFIAGIYNYCDRWCERCSFTTRCRNFESRDKSSSVELDANN
                     KEFWNAVSANLTKAIELLHKAAAQHGIDLDHPMSKEEEEAYEERQAFIRSAAKNHPLS
                     KLCKQYNKTVRPFVEKNEGMVDEQRNLMSELQMGIRTEEEVVHTVVDIGDCFDIIQWY
                     LFFIDPKLQRALHGKLEADEDDAYQSDSNGSAKIAIIAIERSINAWLKLYELLPLSED
                     VALQALSLLSQLKQKALIEFPHAMDFKRPGFDA"
     gene            complement(19606..>20262)
                     /locus_tag="VEV83_11220"
     CDS             complement(19606..>20262)
                     /locus_tag="VEV83_11220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45732.1"
                     /translation="LFLILNNGYSQKLSQVGFSQASNFSWFSILTNQNILIRISDDGH
                     VLQFGTEQTSLYGNYFAPNLIPFSGSINYYQNNIDSDLNGKIKNIGACFFTYYGSNDY
                     PEKVGKIKTAGNLFFDYYRQYGDALTAGKIQTIGTATITWYNSMDNDALRGKLKSIGK
                     TVIDYYSSFDDPYLKGKLKSIGGYKYNWSTVFNGREFQAILKTGNQRQVINGITFVPE
                     "
BASE COUNT         5422 a         4465 c         4336 g         6039 t
ORIGIN      
        1 gcattgagcc gaccatttct attcccggcg aattcggtgt gcgactcgag gattgtgttt
       61 atatgacgtc tcaaggaccg aaatggtttt ctcaaacgag caagtcgata acggaaccgt
      121 tcggatgatc ttcgcgaaaa cagccgccaa aattttttaa gatcgcatga gatttatccg
      181 acagatatta tgagccgcac aatatagaga agagatataa aaaaatgcga ccctctcacc
      241 attgtgccaa acaacttgtg atgcatattg aaacaaatta attcttcaat cgttcgataa
      301 cgtattcttt ttttctgcgg cttacatcga gcgccgttcc gtcattcatg atcacctggc
      361 cgccctctcc ttttacatac tgtttcacat gagttttgtt gataagccat gaatgatgaa
      421 ttcgaataaa acccgtttcg gttaacagct cttcatattc tttcaacgtg cgtgtggaga
      481 ctactttttg cttgttaagc atcatgatct tcgtgtagtt gctgtcggct tcacaataca
      541 cgatgtctct cacttttaaa aaaagcatcc ctgtttgcgc cggcaccgcc aactgttcca
      601 tcgctgaagg cttgcttaaa ttttctttga gtgaaaggta ttgttgcgtt gaggtttttt
      661 ctgtttttcg cgttgccgct ttttgtatag cgagctgcaa ttgctcgagg tcgatgggct
      721 tcaggaggta atcaagtgca gaaaatttta tcgccctgat cgcatactcg tcgtgcgctg
      781 tggtgaaaat gatctcgaaa ttaatttctg gaatttgctt aagcatgtca aagccggtga
      841 gcaccggcat ttcgatatca agaaatacga ggtcgggttg atgcttgcct atcatagcca
      901 aaccttcttc ggcatctctt gccacaccga aaacttcaac gtctctgcaa aatcgttcga
      961 tcatcaactg aagtttctcg cgtgcatttg gctcgtcgtc tactatgatc gctttcagaa
     1021 tcataaattg gtttgagtta tttttaaatt cgtatcacga atcttcgaag tcggcaacga
     1081 tgtcgatttc cactcttgtg cccgcggcgt cacccgtctc atttgtaaga tcaacaatct
     1141 ttaccaccgt tcggtcttcg ttctctaaat tgatcatttg taatcgttcc tctgtgagtt
     1201 ttgtgccttt gcttttatgt tgcgtccggc ttttgttgat ctgggccgca acacttctgc
     1261 ctacaccatc gtcctcgatg atgcaatgca atacccgctc gtttttgttg atgcaaatat
     1321 ccaggtgccc ctttgatctt ctatgccgca agccgtgcca tatcgcgttc tctacgtacg
     1381 gctgcagcaa catcgaaggt atgagtgtct catccgcgtc tatcgcatca tcaagttgaa
     1441 ttttataact gaatggcgtg tcaaatctca acgcttcgag ctcgatataa tatttcaaca
     1501 tctcaagctc tttcgccagc gaaatgctca tctcatcgct ttggtttagt atcagccgca
     1561 caagctttgc aaatttgttc aggtatttgc ttgcgttgtc cggatcattt ttcaaaatat
     1621 agagatcgat cgaattcatg cagttgaaaa taaaatgcgg gttcatctgc gaccgcaatg
     1681 ctttcagcct ccattcgttt accatgttgt tgaattcgct cttttgttgt tcggccttcc
     1741 tgatgttatt tatcctcaga cgaatgagcc atacgataaa tgctgcaaac atcagtgcag
     1801 caataattct gaaaaccgtc gtcctgtaaa aaggcggagt tactgctatc gcaagttctg
     1861 ttggcgttcc ctgccaactg ttgtcattcg atacggcgcg aactttaaaa acaaattgct
     1921 tttccgggac gtttgtgaaa gtggccgtgt tgagcggacc tgcattcatc cagctatcat
     1981 ttataccgtc gagcatatac tcgaggtgat accggctttt gtcgagaccg gtaacgattc
     2041 caaattctat tgagaaaaag ttctctgtat gctttaaccg gatgttgctt gtgggtacca
     2101 atagtcgtac actgtcaaat accctcaacg agcttataag gaccggttgg tgtgtaatat
     2161 caaggttgag cttgtcagga agtccctcga taaacgtttg gtcaacattg caaagaatat
     2221 ttccgttgtg gaggtgtatc atctttgaca cgtaggcgta cgtcgcttca cccaacggcg
     2281 ctgcaaaatt ttgaaatcgg ttctttgcaa catcgtacac tgaaaattta ttgtaagcag
     2341 cacaccatat cctgttgttc ctgtcgattg atatcgcgta aatgtggtta aatacaagtc
     2401 cgtcgctctc ctgccacaat tttgtttccc cggttcttac gttgtaaaag atcaagcccg
     2461 tcgacttctg acttatccaa agattgcctg aagcatcttc atcgaggttc acagcttctt
     2521 cctgcacgat cttaatattg ccaggcatgc gcactgaaaa agtgtcgagc tgattttttg
     2581 cgatgttata ccgggcgatc cgcaagccgg aaaaacagta gtagatgagg ccgcttgttg
     2641 ttaaaacact tgctttgtat tgcgatatgt gatgtttcaa aaaatcgttt tcccgaaccg
     2701 gaattctcct gataacattt tttccgaacc aggcagttat tcccgatctg tcagtaagga
     2761 gatataccgt atcaccgaag gttttaaggg agtatatgat ctcatcgttc accacttttt
     2821 ttaatggcgt tacaagcggc tcatcaaaac gatgcgtctt aagatcaaaa gcatgtacag
     2881 cgttgctcgt gtacaaaaaa aggcagttat tattttgagc gaacccgttt atcgctgttg
     2941 tttcctttgc aatatccttg tcgaacgtta agtcgaaaga atcagttttt tgcgtttgac
     3001 gatcgtaatg gtacaagtag ggccggtcga tggttgtaaa ccaccattgc tcctgttgat
     3061 cttcaaaaaa acgcctgatc gcggtatgac tttggggttc tgagtttttg aaaggctggt
     3121 gcagccggta gctcatgaga gaagaattgg tgtatgacaa acctgcaatc gttcccagcc
     3181 aaacagtacc ttctacatct tcataagcat cccaaaaaaa attcgcagcc acagaaaaat
     3241 cagcataagg gtcgtggtaa aattcttcca cttttttttg atccgcatca tacacaaaca
     3301 gggcataccc ccacgtgctt atccaataac gattctttga atccacaaaa atgcggtttg
     3361 gaggcccggc gggtgtgcgg ctactcttta taacgtcaag cgatgtaaca gtgtttgtcg
     3421 aaaaatcgta ttggtaaagc aggttggctc catatactag tttgccatgt ctatcgaaac
     3481 tgactggata atggatgagt gaatcgaaca aggcaagttt ttgcggattg ttcttataat
     3541 tgaaaaactt tttggatttt atatcgaatt ggttgatgcc tttcactgtc gcgatccaaa
     3601 gtgatcgctt atccggtgaa agcacgagcc cttttttata gatcgcattc gatgttagcg
     3661 cgctcttacc gtcgttttct ccatactgtc gaaacgatct gtttgaagaa acgtattcat
     3721 acaaaccata gctgctcgcg caccaaatcg tgccctggcc gtcgcaaaga atatcggtgt
     3781 aataggcatc ttgttttgca cccggataaa aattttcaaa tgtttgcgtg ttctgacggt
     3841 aacagctgat gccggtttcc gtagcacacc atatgtctcc ggaactgtct aaacaaatac
     3901 cgtgaactgt attttgcacc aggctgttcg cgttattcct gtcgttgcgg aatttaatga
     3961 aatgagttcc atcaaaacgg ttgaggccgt cgaaggtgcc tatccatacg aaacccgctt
     4021 tatccctcac gatgcagtta acgatgttat tgcttagccc gtctttttca ctgatgcgat
     4081 taaaaataga ttgctgcacg ttgtcctggg caaagccatg ggcaaagagg atgcacgcaa
     4141 aagcagatag tattggccgg gtcagcatcg attcaaaact actaaaagag tttatgcacg
     4201 caatatttcc cttgtgtcga aatttctgct ggcgtatgtc cgctgaagga atcgtgatgc
     4261 gtttacagct ttataaattt gaatgtgtgt gtatcgccat tcgaattgaa taaagccagt
     4321 gtgtaggtcc cggcaacaag tcctgataca tccagctgtt ttgttccacc tgtaaacgaa
     4381 gatctcaaca taacttgtcc acgcacattg gcaacactca cctgccacgt tcctgtgatt
     4441 gtctgattca gattgacact tataaaattt gttgccggat tcggataaag actaacattc
     4501 aatgaaactt tactgctcaa tgattcgtcg cgcgaagggt tttgctgagt caactggttc
     4561 accgtcattg cagcgctcca aaaagttttg ttgagcacat tgctgtcgct gttcacctgg
     4621 ttggttgtag tattgaccga accattagcg attgaccatt ttgttccgtc ccagtattgg
     4681 agccgaaggt cgggctcggt aatagtgttc gtgctgccgc cgctgttgtc ccattctgca
     4741 tcacgatatg ttgcaaacat acttgcctgc ggatcgatcg aatattgttg cggctcgata
     4801 atccaaaaac ggtcgagcga ttgcgccgag ttgtcaacgt taaacgtgtt gttcatattc
     4861 gtaactgttg ctggcaacgg cctgttattg ggtaaggtgt ttgtagcagt cgggtaagtg
     4921 gcaaacctga caaggccatt aattccactg ccggctttag tgatcgtaag agatacagga
     4981 agaaaatcac cggttacgtt gttgccaaag ggcacgaggt agctggtatt tttctgctgg
     5041 ccaattttcc agttcacata tccgcagccc tgcagactgg aagtttcgct tacaataaaa
     5101 cctgttgttc tttgtatcgc ttgtgatgac gaagaaagta tggtcaactc tttagttgaa
     5161 agaagcaatt gaacgctgct tatattgagg acatgttttg taatgctcgc agtgttgcca
     5221 acttcgatgg attgatttaa agtctttgtt ccggtcccgg atagttgaag cagtggaaaa
     5281 cttgtgatat ggctcccgcc tattttttga cttccgccgt tgaaggttac tttgccatca
     5341 gctttatcga aaccgttcgt cgacgcgttg tttataaaat ctttttttag tcgtagttcg
     5401 ccatccactt ttattattcc ggagcccgca tttacgagat tattttgcac caccattttt
     5461 gtgctgctat ctattatgat gcttccgctg ttcgtggttt gtgcgatgca tacattcgta
     5521 acaaacaagg cgagtgataa aatatttttc attggagaat attttgatat ttttcgaaaa
     5581 tcgaggtaga ttttttctcc agttgttatt ggaaagtgcc aaagaatata agtccctggc
     5641 cggcctgcgg ataccttgat gtatatggcg cccctatcat gtaattgagg ccatcaaatg
     5701 caaccgattc gccaaaacct tcgaacgatt gggtgttgct attatccgta attcgtttca
     5761 cgagagaaaa tgccaggtac tgcgggttgt atttgtatag ataaacgcag ccctggtcct
     5821 catttccacc catagcctca ttgcttgcac agatcatgag catatcacct ttgatcatca
     5881 ggttccagcc aaaatgcagg tcaaaagaag tggtcgaggg atagaatgtt ttgttatgcg
     5941 tccaggtgct gatcgtccgg gtaaacagat gtgctgaacc agttgtggca ccttcattca
     6001 tttcgtacat tgacccgaca actactttgt tgctatcgag agaaatgctt gcgccaaagt
     6061 aactaccgtc cgtcggggtg ttcgataata gctttccctg ctgcgtgtat ccgcccgccc
     6121 ggtttgcgac aaatacgtat gctgctccac atttgatagc atttaccttg acatccgttg
     6181 cgccgaccgc aatataactt ccatatatgg acacagatgc gccaaacgca tcggcggcct
     6241 ggccatcgtt cgcgatcacc tttgttttta aactccaact cgtgccgctg cgcgtgtaca
     6301 cataagcgca gccctggcta ctgttgccat tcacatcttc tgaaaccgcc cccgttatta
     6361 tggttgaacc ttcaatatca acacatccgc catagtaaga aaaaactttg ccgccgaccg
     6421 ggacaatctt tgcctgctga gtccaggtat caccgtttct gagaaataca taaagtgctc
     6481 cgatatgtgc attagcatcg ggcgcaccaa ccacgatgta acttccatcg atcgcaacac
     6541 tacttccaaa tttttcatcc tttgcgccgt cgtcagcaat aagccttgcc tgctgtaccc
     6601 aattgccgtt cactttttta aacacatatg cgcttccctg cccgacattt gccccaacac
     6661 tatcattctc cgcaccagcc actgcataat ccccactcat gtcgcagcta cggcctaaat
     6721 aagaggacgc agaagcgcct gtggccgatt tgcttttcat ctgttcaaga ggattcggtt
     6781 tcgtataagc aaatggtatc cattgtgaac catcgaacat atacaagcca ccatcatcgg
     6841 tatcaaaaac catgagaccc ccgtcattta ttgtggtggg aatggcatta cgttgggcgg
     6901 ttgtcatacg cggaaatttg acgccttttg cagtgctttt tacatcaagc attgcagtag
     6961 catcggcaga tgacccgtca ttgttgatgg caacctgcgc gtttgttttg ataaaaatta
     7021 cggaaagaaa acaaacggcg attgtgagga gctttttcat tgttttgatt ttttgaatga
     7081 agagacaaac ttagattcac gagagagcca tgtcaatcta tacagagtaa gtggaaacag
     7141 attatgagca agtggtgtga attgcgagca agtggaggat tgagggcgat tatcgaaaaa
     7201 gcaccaaatc acaagaaaca aatcgcaaat aagcaccaaa tgctaaaaat aatccctcat
     7261 tgccaatagc agaatttgag gtttgaattt tcggttctat tatttggttc ttgagatttg
     7321 agatttttcg aggaagtacc aaatttcaag aaacaaatct caaataagca ccaaatgaaa
     7381 aatccaaata acgctccgtt ggcgagagcg aattgagatt tgaatttttg gtttctatta
     7441 tttggttctt gagatttgag atttggaatt tttgtctcca ttatttggtt cttgacattt
     7501 gagatttttc taggaagcat caaatctcaa gaaagaaatc tcaaataagc accgaatgaa
     7561 aaattcaagt aatcctgcgt tggcaagagc gaattgagat tttaattttt cgttctatta
     7621 tttggttctt gagatttgag atttggaatt tttgtctctt ggatcttgac atttgagatt
     7681 ttttaggaag cacgaaatct taagaaacaa atctcaaata agcaccaaat gaaaaaattc
     7741 aaacatcctg cgttggcaag agcgaattga gatttgaatt ttttggttct attatttggt
     7801 tcttgatatt tgagatttgg aatttttgtc tccattattt ggttcttgat atttgaaatt
     7861 tggaactttt gtctctatta ttgggatctt gatatctttc taggaagtac caaatctcaa
     7921 gaaacaaatc tcaaaataag caccaattga aaaattcaaa cattctccgt tcgcaagagc
     7981 gaattcagat tttaattttt tcttctatta tttggttctt gacattgaaa tttggaattt
     8041 ttttgtctct tggatcttga catttgagat tttttaggaa gcatcaaatc tcaagaaaca
     8101 agtctcaaat aagcaccaaa tgaaaaatcc aaataactct ccgttggcaa gagcgaattg
     8161 agatttcaat ttttgcttct attatttggt tcctgagatt cgagacttgg aatttttgtc
     8221 tccattattt ggttcttgat atttgaaatt tggaactttt gtcccggcgc ttttctccat
     8281 cggattcacg aaagtagcgt tgaaaagacc agtattgcca atgcaagaag aatgataaac
     8341 agcagatcag ttatccaatg agtttgtttc ctgggctttt gcatttttta tgaagttctc
     8401 agcaaacata aatttctgca ctcgctcaaa gcaaaacgag ggcttaagtg gatgatccgc
     8461 ttgagtaacc ggttaccgtg cgggccgaat caaacactat tctgcaaatt ttattgggaa
     8521 tattttgtgc gaaaaatcac gttctttctt tcatctgctc gcctatcttc gaaaggaggt
     8581 tcggagttaa tgaagcatgt tgaagttcat cttttttttg caattgtttg agaataaaga
     8641 acaaattaat tgcgtccgta aattgtagtt tcgccgtatg aagtcatgtg tgcttttgct
     8701 cgtattgttg ccgctttccc ttccaacatt tgcgcaactg gccgtcccgg atagtatata
     8761 ctcacccgtt accacaacgg acgcaaaagc tcaacgtcac cgctatctac ttgatacaat
     8821 gatcaggcaa tacctggaag acccattgaa tgatgataac gaaggtgaat ggaatgaagc
     8881 gttatgggcg atcgagttgc tgcaatacaa agacgaatac accacggaaa aattagggat
     8941 cgcatggcgc atggcacctc aactctcaga atattttcaa aagaatttgc tcgagacgac
     9001 gtattcgctt tacaaaaaag aatttaaggc gcaggtgctg cagttgatgc agcaaacaaa
     9061 gtctgtgtct gttttcatcc gttgcgcaga atatatattg agagccgacc cggttaacgg
     9121 gaaaccgatc gttgcttcgt cgatgaaacg aacgttcccg gggaattcaa gcaccggttt
     9181 acagatcttg caaacccggc tgaccacgac gccgcagccc atacctccat taaaagatat
     9241 cctcggcagt aaattcttaa caggacaaac tgtgatctat agtttgcagc gggcgaatcg
     9301 tgattatgcc ggcctggtgc tcatacgtaa accagacgga acatttctaa aagatatttc
     9361 aggcggttat tttcatactt cacaacttgc ccgtgcaatc acagcttatc cgtactatat
     9421 aacaaacggc aacaccccgc aaggcattct ccgtttcagt ggttttgatg tatcgagact
     9481 tttatacatc gggccaaccc aaaatctgca attgcagatc ccttatgaaa taacgccgga
     9541 tgcattcttt aacgacagta cattaatcga cacaccatgg agcaaacaat tatatgcgtc
     9601 cctgttgcct gcgtcatgga aaaattacag tagcatttat gaaagtttct acgcaggaaa
     9661 aatgggcagg acggctatca tcatgcacgg cacaaccatc gacccggaat tttacagggc
     9721 gcaaacatat tatccgcaaa cgccttcatt gggttgcttg tgcagttatg aagaatggaa
     9781 tgatgcggga taccgggtaa acagtaacca gcaaaagatc gtagacgcgc tcaatgcgat
     9841 cggcagcagt gatggttatg ttgttgtgat cgacatcgac aacaagaaaa aaaatgttac
     9901 gatcgatgaa gtgaaaagtt tgctggacaa attgattgaa gaataagcaa cctgcttctt
     9961 caaactgtct cccgtctcca cctcagcctt tgtcaaattg tgatgccagt catttttcag
    10021 ttcaacgtgt atggttaact tgcaaccgtt tcggtgaata acgaagaaaa taatttttag
    10081 aagcaacgtt atctaataaa tccgtgtcgg taaataaact cgatcatgaa aactggtaaa
    10141 gtccctcaac aactgctact ctttgcttgc ggcattgcac ttctgatgct gaatgcatgt
    10201 tcaaaagagc acggcgaaac aactacttat aagatcctgt caccggttta cgaagacagg
    10261 tcgacggctc ttgcggcgct caacggcagg gccgatcaat cgtttctgca taccggaaaa
    10321 atttatgtga aggacaattt tattttcatc aatgagatag acaaaggaat tcatgtgatc
    10381 gacaatacga acccttctca tccaaggcaa atcgcatttt tacgcattcc cggaaatgag
    10441 gacatcgcca tccttggcaa tattttgtat gcggacatgt atgccgatct acttgccatt
    10501 gacataactg atgtgacgaa agttcatttg acggcgtcgt taaataattt tttcacgggc
    10561 cgccaatttg tgaacggcta ccagacgacc ggtgaccagg tgatcacaga ctggatagag
    10621 aaagacacca cagcacctct gaatccgccg gggaattgcc ttgcatgcca gttaatgttg
    10681 gccagtgctg ctgccggtcc cgtcgggcag gccggttcga tggcaaaaat ggttttactt
    10741 aataattatt tgtacgccat tagtgaggcg cattcactcg gtattgcgag cgtgacgaat
    10801 gcaaaatctc cacatttcga aggatccatg ttcgcgggtt atgatctcga aacgatctat
    10861 cctttcgagg acaagctgtt tcttggttct gacgtcggca cgttcatgta tgatgtttct
    10921 aaccctgtcc aaccgctttc cattggcaca tttgaacatg gccgcgcctg tgatcctgtt
    10981 gttaccgatg gcagctacgc atatgttact ttgcatgcgg gcacgaattg tggcggcgac
    11041 gaaaacgaac tcgatgtggt tgacgttcgc aatattgaac agtcggtgct tgttaaagcg
    11101 tatccgatga ccaagcctac cggcctttgc caggacggaa agttgctgtt cgtgtgcgat
    11161 tcaacagtgg tgaaaatttt tgataccaca gatccatctg cgcttcaact gttgaaccag
    11221 atcagttgca attcaccgta cgatgttatc gccaggaata aaattgcgat ggtcgtaaat
    11281 aatgaaggtt tatttcagtt cgactacacc gatttgaata atatcaggca attgagtttt
    11341 ctttctgaaa aataaagctg ggcaaagtta tcttgttagc tggccggatc gtaaaagtca
    11401 ctttttagaa atttagcgac gctcttgctg gcagcctggt cccacgcatt tatatgatca
    11461 aagtttggaa gcgttcttgc ttttgcggct gttttaaaat tgctgtaggt tttgttttcc
    11521 tcctgctcgc gctccgtgag aaaaaaatca gttccgaaca tgatgcgatc gccgtatgac
    11581 ggatgattta attcgtcgaa gatggtagga aagatgtcct ggtcatgcag cgcatacgat
    11641 atgtctgtgt acagcgtatc atatttcaga agcatgtctt taacctgcag gaaccagttt
    11701 ctccgtgctg cgccgaacgg cgcgtcgttg ctgttcctgt ccttcatttg attacccccg
    11761 ccaaaatggg caaggcaaag ttttagcggt gtgcctttcg ctttaaagtg atccatcatg
    11821 cttacgaaac tgtttggctc catgaagtac gaacagctgt caagattatt gtttgagttc
    11881 ttcgttccca acaaccatcg ccagaaaccg cgttctttta catagtctcc attgaatgtg
    11941 gtgctggaat atggatcggc cgcggaaagg ttctcgcgta aatatttttc atcgttgttg
    12001 tagataccgc cgagatagta gcaatgactc aacacaggca cattgtgcac ggcagcccat
    12061 tcaaatgttt ccatgagccg ttgatcaaac gggtaataac ccatgctcgg atagatctta
    12121 attccgcaaa acggatttac cgatgttgta tcatttattt tgagcggggt tgaaaagtat
    12181 tgctcaactt tttctttaat agatcgctga cccgcggccc agcgtggatc taatcctaaa
    12241 aataccagca gtctattcgg gtatctacgc tttatgttga gcacttcctc gagctgtcct
    12301 tcaaatccag atgtggaagg tccggcgccg cagtattcca tgttcatcgt aagcgcaacg
    12361 aacttcatcg cctggtcatc ggtatatgaa ttcatgagcg cgtcaaacac ttcggcctgg
    12421 ttcttacttt tcccgatctt caaaaaactc gcataccgtt ttcccccatt cccgccaagc
    12481 ttgcttagca ggaattcaac cgatactgtt cctggctgcg tattggtgat cttgtcgact
    12541 gcatcggcta cgaaatcggg cagatataaa tgcagaaaac ggcgcggcgc attggtcata
    12601 gtgaacgtgt ggctgtgcac attataatat tgcataaacg aactttagga atttttagaa
    12661 tacattttct ttagcacgtc aaaccaaaat gggccgccaa agctggcggc gaaaccactg
    12721 ataagaacgc caattatctt ccacaaccaa tacctttttt cgtgaatttg cggttgccga
    12781 atcgttttgt cgagcgttgc aagatgtatg gcgctgaagt cgtatccaac cggcaacaac
    12841 gtttcttttt gcagcgcgcc aaatttgtct agaagtattt tgaggttcgt cgaatctgac
    12901 tgaatctggc cagcattgct attataaaat gatgttacgg cctgcgattt cgcgggataa
    12961 tcgcggtata caccaaacag ttgaacgctg tcaacattta caataaatgc aagcactgct
    13021 ccgatgacaa acaggtattt tcgcgttttc tttttatacc ataaagtcaa tctttgcgtt
    13081 agttccgtgt accaattttc aatgtttgcg actagttttt tataaatgac gctttcatcg
    13141 atcgattcgt tttgcatgct gttcagctct gcacttttta atgcctgggt tagaaacatc
    13201 atcacatcgc tcggcagcaa tgtttgggta gcctttttaa aattggctaa cgtgccattt
    13261 gcataactta cgtttccgtt tgagacatgt tctaaatctg caggcaggcg ctgtgtctgc
    13321 acaagatgag ctgtcgcgac cacatcaatc agagtctcgg cgaacaggca tggttgaata
    13381 tcgcttgacg gctttcccgg tgcacgactc agcatgtcta cgttgccgtg catgtacaac
    13441 aacgagcccc agttcactcc atttggaaag tcctgcagtt gcagaagaat atattttttc
    13501 atgaatcgac cgcgctccgc tttgagttgt gcaaacgcct cgtacaccaa actgcagaag
    13561 atggcaaaca gcgcccaggt gatgataatg gccagcgcaa tattgataac aggaaaatta
    13621 aacagattca ttttggtagt attggtgttg agtgtatttt gaaaatgatt tttttagatc
    13681 acttcaacct gtctcttaat tctttctcaa ttcgatcaca actcacaaac aagggtttgt
    13741 cagtgatctc aatgtcaaat gactgttgct tcaccctata agttccctcc actttgccaa
    13801 gcggagtacc gatagaaaaa tctccatgcg cagcagacgc acggttaaat acgccacccg
    13861 cattgacgat ctgttgaccg gcgcccatta agatgtcatc tgcatttccg tcgaaaggaa
    13921 tactaaactt gcacatatat tgttcgtttg tgaattaact ccgattagaa ccaacgttcg
    13981 aggaatgtcc acgcattggt ttgaaaaaca ttttgaacga taacatcggc gctgatccga
    14041 ttgaatgtat ttttcaatct gccgctgttg ttttgaatat agttgaacgc atgcctctcc
    14101 aaatatgact ttaattcagg gtactgctca acagtccaga aactattcaa cggatcaaca
    14161 atcccatcgt agtctgaacc aataccgatg ttaccccagg cgtaaagacc gttatcatcc
    14221 aacaactccg ctatgtattg aatttgattc cacaaaagct ggctgcggta atgcattatt
    14281 ttgtttctga agaatgaatg ctttacacgc ttaactgttt cttcgctcgc gagcctgcgt
    14341 tcgtcgagct gcagagcgat gattccaccc gatcttgcca taagcagcag ttcatcgtcg
    14401 taaaaattta tttcaccgtt attcaacgta ttgccgatct cgggatattt ggaaaacggt
    14461 gtgttcatat caggcaagcc attcgcaaca ccatgactca tgaaaatagg aatacctgga
    14521 tatttttgtt gacggatctg aaaaaattct tgccgggcct gcggactcaa atgttttata
    14581 tcgatcaata ttctttttcc ctccgtgtcg tcaagtaaga tatcaagcac ttctctgccc
    14641 aaaggtgtaa agccggtgtt gagtccaacg tcttgatcgc atttggtcgc taccaatccg
    14701 cgcaagctct ggctatgacc acacagctca ttgtaaaagt gatgcgcgaa cgtgatgaac
    14761 catggcctta ccggttggtt cttcaaatct ctcgcatgct gttttacttg ttccgcgtta
    14821 gcgcggatat ttgtcggacc cctgtcgggg tctatgccgc aattcaatac atgcaaacct
    14881 tcgatcgata atatgacggc tatcacgaat ggttggttat ccaaccgatt ttcaatctta
    14941 gcggtattct cttccatggc cgcatttaat tcctggaaat tgtttacgat cctgtattgg
    15001 tattttgttc cgtcaacctt tacggtaacg ttgtgcattg ccgtcatgaa accaaactcc
    15061 agcatcaggt cagagaaata gtcctccatg ccttgtatca catcaatacg cggcttgccc
    15121 atttcggttg caaagtcttc gaggatgtcg gcaagaagcc cggtcccgga ccggttatta
    15181 aaaaaccatt tttcaatact tcccatggcc accacaataa ccgccagcct gccatatgca
    15241 gcggcagcca tgttcgtttg cgaaaatttt gtgatgcctc caacgtcgtt cagcaatttg
    15301 tcaacaaacg taggcgcgtc gtaaaaccac aaactgctcc tgtcgctgga actattactt
    15361 tgagtaccgg gtgtggttct gaacgagcgt ccgaaagctt tgtaattcgg atgcgtgtga
    15421 aggtcaatcg tgaagtcggt tattggcaca gtgaataaat ttaattataa taaatgttgt
    15481 cgactgaaac ccaactcctg cagaaaagaa aacagatttt ggtgcatgcg aattggaaga
    15541 taatgcattt taatgatcaa cacaatcttt taccccacat cggaaaactg gcaagtcggg
    15601 ttaataggga ggtaggaatt aggaattggg attttggtat tgcgattaac cgctgtgctc
    15661 gaacgggatt gaacccttca ctcttgacat tgttaatctt ttcaaaaaca agctactcat
    15721 cttcgctcca aaaaaatgcc gcgcggtatt tttgcgttcc cttaaaaaat aatgtgcaca
    15781 tgacgatgcg aacctattca accctgttca tcctttccgt atttttcttt gtttcctgta
    15841 aaaaaaatgt agatcaaacc gaatcggtgc cgccggtcga cactaccagc gcgcagtaca
    15901 taacaaacga ttcagcattg cagataacac gcgaggtgta tttgtggaat acacagatcc
    15961 cggctgattt tgatccgggc gcttacgcag atcctgcgga agaaatggtc ggcattcgtg
    16021 catacagcat gcagacgggt tttgctcagc ctgttgatcg tttcagtttc gcaataaagc
    16081 aaagcgattg gaatgacatc agcagtggtg ttggtgcaga ttttggcatg agtgtattct
    16141 tcaatagccc atatgacctt cgtgtgaaat atgcggaaca atcgtcgccg tccggccgtg
    16201 caggaatcca gcgtggctgg cggatcattc gcataaatgg taactctaat attgacacca
    16261 gctcgtcgtc gataaacatg atcgtggatg cggtcttcta tagttcccaa acatcattca
    16321 cgtttaagaa gcccgatggc acaaccgcaa acatcacgct gactgccaag aaatataaaa
    16381 cccacccgat ctttgccgat tcggtttata aagtagataa taatcgcgta ggttacctgg
    16441 tattaaattc gtttctcggc gacacaacag agatcaacaa cgagtttaaa agcatcttta
    16501 gcaaattcgc acagcaaaat gtaaatcaac tcatcattga cattcgttat aatggcggcg
    16561 gttacgtaag tctcgccgaa aaactggcca actacctggt gccgaacaat ggcgatcacc
    16621 aggtgatgta caaggaaact ttcaacagca atctttcaga ttatgatgaa actgcattgt
    16681 atgataaact cagttcggtg aatgttgata atatattttt tattgtgtct gataacacgg
    16741 cctcagcgag cgaattactt atcaatgcat tgaagccttt tgtgtcagaa actttagtag
    16801 gtccatctac gcacacctat ggaaagccgg ttggcttctt ccctatcccg gtatcggact
    16861 ggtatatatt tcccgtttcg tttaagacag tgaacaaaga tggcaatgga gattatttca
    16921 ctgggttcac gatcgatcat ccggttgccg atggcgttga taagaactgg ggcgatcgaa
    16981 acgaaagttg tttgaattct gttctcactt acatacaaac aggcgttttc ggtgttgtgc
    17041 agggaaatgt aaatatctca ggcagctcag cgaaccaaaa gatcaacaaa aaagcattta
    17101 aaggtgcggt tggtaagaag gacagaaagc gttaaggaat gctgcatcgg cgagctgcta
    17161 agtaatttat tttagcgcgt caagatcaac ttcaacgttt aataattgct gcaatgatgc
    17221 agcaaaatct tttctcatat cgggcggcat attgcgtaca cgcgcctgga aatgattcgc
    17281 gcctggtatc ataaaacttt ttgaattcac gcgattggaa acgataactc tgcacgcgga
    17341 ccaggtgtcg cgacctccgt atatatacaa catgttattc cctttttcgt tgagccacgc
    17401 gtggacgtta tgcgtgaacg ttgtatcaaa gggcgcgtat gaaagatatt tgggagcgag
    17461 tgcggctgac ggattttgac ccgagatata atgaagataa gttttgaagc gggttatatc
    17521 atacccgtaa tatcccattt ctgtccttgc catataattg tgtacaacca attgtgcaag
    17581 acctttatca gacatccaat ctatgggcga gatttttaga aaatgatcca ggtaaacatc
    17641 cactgaagcg ttgaccggaa tttgttcaca cggcgtaaac cctgtttgcc agaatgaaaa
    17701 aggatattcc agcaccgcga tctcaaacac tccgccaagg ccgccaaaat aattatacgt
    17761 ttctcccgtc cccttttcat accactttaa tttttcgagc atttcgtttt catgtgtgag
    17821 catgaatttc tgaaaattaa atattcggtc gcggcactcc tgcgacccca tcgtatccaa
    17881 aaatttgtag atgcgtttat cttccaaact gtttggaagc ggtgccacat aaggtatggt
    17941 cacattaaca tcatcgggat aatagtattt atagtagatc gaagtttggc cgccgcggct
    18001 gatccccgtg ctgacaaatt tcccgctata aatagttttc aaaagctcgt ttacgtgatg
    18061 caggtctgca catgcctgtg cgaacgtcag gtattgccat tgtaatgttt cgggtcgtga
    18121 ttgcccgaag tagcgaaatt caatatcaat atcatttgcg ttcaaaatat ccgcgatctc
    18181 atcttcgccc ggatacaatt catatccttc cgtttccata accactggcc gttcaaatcc
    18241 cttgtgaata agtacggccg attgataaaa atatccgtct tcaggatgct gatgatcgag
    18301 cggttgtttg atctgtaaag catacctcag gtatttatca ccaggattcg atatcttttt
    18361 gaactgcaca ccgggcaaat cgtacaaggc gcgctccaat gcaagctcat cgctttgtgc
    18421 ccgcagttga ctcaaacaga aaaagaaaaa gaaaacaaac agtgatttca taaaagtgaa
    18481 gatatgggat tcgttcgtcg ggtgtttaga cataacagga tttacagcct tagcgaatgg
    18541 ggaacatcaa gccggttcac agcgcgctga ttgttcaggc atcaaagccc ggcctcttga
    18601 aatccatggc gtgcggaaat tcgatgagtg ctttttgctt cagttgactt aataacgaaa
    18661 gtgcttgcaa tgctacgtct tccgataaag gcagcagctc atatagcttt aaccatgcgt
    18721 tgatgcttcg ctcgatcgcg ataattgcaa tctttgcgct gccattgctg tcactttggt
    18781 atgcatcgtc ttcgtctgct tcaagtttgc catgaagtgc tctttgtaat tttggatcga
    18841 taaaaaataa ataccattga attatgtcga aacaatcccc gatgtcgacg acggtatgaa
    18901 ccacctcctc ttcggttcgt attcccattt ggagttcact cattaaattt ctctgttcat
    18961 cgaccatgcc ctcatttttc tcaacaaatg gtcgtaccgt tttgttgtac tgcttacaaa
    19021 gttttgataa gggatgattt ttagctgcac tccgtatgaa tgcttgacgt tcttcgtatg
    19081 cttcctcttc ttctttgctc attggatggt ctagatctat tccatgctgc gcagctgctt
    19141 tatgcaacaa ttcgattgct ttggtgagat ttgctgatac agcgttccaa aactctttgt
    19201 tgtttgcatc caactcgacc gacgacgatt tgtccctgct ttcaaaattg cggcagcggg
    19261 ttgtgaacga acagcgttca caccagcgat cacaataatt ataaatgccg gcaataaatt
    19321 gttgtgccat tgaataaagt taacgctttg cagatgaagg cagcaccggt agccaaccgg
    19381 taacagcagt aatactcttc atttcatcat ggcgcctact ggtcataaag aattattcta
    19441 gatgctaagc tctaaactag tgctcacaat gaaatgattt atgttactgt tttttgttca
    19501 aactcgtatg cgcatgcttt gaatgatgtc aatgaaaatt cagaaaacaa aaaagcggtc
    19561 ccagaagaga aacagctttt ctacttagtc aaaaatgata aattttcatt ccggaacgaa
    19621 tgttattcca ttaatgacct gccgctgatt tcctgttttt agaatcgcct ggaattctct
    19681 cccgttaaat acagtgctcc agttgtattt atagccgccg atgcttttta gttttccctt
    19741 taggtacgga tcgtcaaacg aggaatagta gtcgataact gttttgccga tggatttcag
    19801 cttgcctctt aatgcgtcat tgtccatgga gttgtaccag gttatcgtag ctgtaccgat
    19861 cgtttgtatt ttgcctgcgg tcaatgcatc gccatactgc cggtaataat caaagaacaa
    19921 gttacccgcg gttttgatct tgccaacttt ttcggggtag tcgttcgagc cgtaataggt
    19981 aaagaaacag gcgccaatat ttttgatctt tccgttcaag tcggagtcga tattgttctg
    20041 ataataattt attgatccgg aaaacgggat gaggttcggc gcaaaataat ttccgtacaa
    20101 agaagtttgc tcagttccga actgtaggac atgtccatcg tccgaaatgc gtatcaaaat
    20161 attttgattc gttagtatag aaaaccagga aaagttacta gcctgcgaaa agcccacctg
    20221 gcttagcttc tgactgtaac cattattaag gataaggaag ag
//
LOCUS       DASQJI010000396         7480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_44900,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000396 DASQJI010000000
VERSION     DASQJI010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7480
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44900"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VEV83_11225"
     CDS             complement(<1..863)
                     /locus_tag="VEV83_11225"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK45733.1"
                     /translation="MTRIKFSVGISACLCVWIFSSCKKDSAGNAPFAFYSIEVHGSSV
                     TFTNKSEGATTYKWDFGDGTESTEESPTHEYPGKGKYVPTLYATSADGVTSEASTVIN
                     ISKTSGIKLDDHSLADWDTVTHNVVVGGSKSGNFIQAKYDYDGENVYFYFEQNTSKGE
                     GNIYDMYIDADVDMSTGYLTNEIPNGAYEVLLEGTIFDDWLDPYYHSGDQESFDGYKY
                     QNISEFWTVGAWEEKNGVLRFEGAIKRSKIRGLTGKALKIGVQVAANDWSAIIGYSPD
                     LESDAFFLDMS"
     gene            complement(885..2414)
                     /locus_tag="VEV83_11230"
     CDS             complement(885..2414)
                     /locus_tag="VEV83_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK45734.1"
                     /translation="MKAINRILQIFFVTVLIFTMDTGCLKEVTPSDAITPDILTSTIE
                     GLTQAVNGAYALFKDHVVFNGTADDNNMYLRQYFQMSDFASDDIVCGQVTEDPFFLSF
                     SLNHSPAQTNSRYFWFISYKVINDVNTVIEAAEKISNPDPTVDQLKGECYFLRAFCHF
                     SLVRFYARPYSQNPDADGIVLRLSTSEPAIKARSSVKDVYAQIIDDAQKAADLMTQPR
                     GVEYASKEAAWALLSRVYLYEEDNEDAIDYATKVINSGRFQLTNKNTFRDLFADAPNS
                     SETIFCVAFTPAEDYGKFGSIASMLYSDGNSGWGEEYASQSLRDVMSEHPEDIRWSYI
                     YPLKDGNGVIQKKNGIEIYYITKFSFQDGSPTLSSPIMFRLAEMYLNRAEANAKMNRV
                     KEALDDVDMIRKNRNLQGSLYNGVVPNGTTALEVVLKERRLELFAEGQRTFDVYRNNL
                     PMDRTYWGYHLPGLKETDIDLSKKPTGYDNMIIEPTSPRIIYYIPIDEVQTNTLCTQN
                     P"
     gene            complement(2425..5436)
                     /locus_tag="VEV83_11235"
     CDS             complement(2425..5436)
                     /locus_tag="VEV83_11235"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK45735.1"
                     /translation="MKYLFTRTCSLVVPLLFCSVLNAQTRSVSGNVVSVANGTPVTKA
                     TILVKQGSKYFAAADDGSFTLTIPSDTATIVVTAVGFTSKEFFIGKTDDNIVVRLDEK
                     NNDLDEVVVVGYSDKKRSELTASIGVVKGDKLRDVTSNDVGTLLQGKVAGLEVINSSG
                     VPGSAAEIRLRGISSVNASQTPLYVVDGIIGGNFDPNDVESISVLKDAAATAMYGSQA
                     NAGVIVVTTKKARSGNANFEAKITAGVRTPDYGSMDMMSGSQLYEYQKEFYRDYIPSD
                     TGNSHKIDLLKFYAERPPELQNQNYSWLDAIFSPAFVQNYYVSVSGKTDKNDYYVGLS
                     YYDENGTYRNTNFQRVNVRAGLGLHFSDKVSFTNSINISGVKGKSYDYNDIYYAYLNM
                     PWDNPYDSTGNPIYVDGNSTFKWWSRDKVNPLHTIENSDHPYQGFDVNYDASLNVGIN
                     KWLSFSSTNRFAASYSKSTTYYSPTVAGEYHGSGFLDEQDIANYGATLNNLFKFTVPH
                     GKHNITGLAGVAYETGRTEFLGGSGRGLPVGLKVLNVVSNNLSVSGSYDEGSILSFIS
                     QANYSYLNKYFLTASYRLDGSTAFPKSKRWGSFPAISAGWLASNEDFLAGNDVITNLK
                     LRASYGVTGTEDIGASRYLGLYSLSTQYNSQPGAVPLQLPSPNLTWESKYQLNIGADV
                     SFFDRVDVTVDVYHALTKDLLLQVAQPLSVGFEQRWENSGEIDNKGIELTIASTNIQT
                     KNFSWVTNFNISFNSNKLKNLPATFVKTGEWAISEIYRNGGNLYEFFMPVYLGADPQT
                     GAPLWEKILKDDQGNITGKEATSNYADATYQEVGSALPKYQGDFTNTFSYKNFALSVD
                     AYFVHGNKVFSNILRFTINDGNEPYYNQVVLPDGYSIWTKPGDNATNPSPQNSASSTE
                     TSTRYLKDGSFVNLRNITLSYNLPQNVSKRLGMHNVRVAASADNVYTWTKFLGQDPQT
                     TITPDIYATPGVSDFKYPNNRQFLLTLNLNF"
     gene            5708..6496
                     /locus_tag="VEV83_11240"
     CDS             5708..6496
                     /locus_tag="VEV83_11240"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK45736.1"
                     /translation="MSEWLLNKSFVIVGGTAGMGLSAALACIKEGAKVVVVGKNAEHV
                     EEAQKQLGDNGLVKTGDATNETTAEEAIQACVNTFGSFDGIYHVAGGSGRRFGDGPLH
                     EITLEGWEKTLRINLTSLMLSNRAAIKHFMENNRAGVILNISSILGFSPSPKFFATHT
                     YAAAKSAVVGFSKSIAAYYAPYNIRVNVIVPSLIETPMSQRAVHDDAIMEFIKTKQPL
                     DGGRIGMPGDVDGAAVFLLSDHARFVTGQVVAVDGGWSISEGQY"
     gene            6501..7394
                     /locus_tag="VEV83_11245"
     CDS             6501..7394
                     /locus_tag="VEV83_11245"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYK45737.1"
                     /translation="MTVGIGIDLGGTRIKAAALDENGNVLQQSYTPTKDGSDSTWKHT
                     VLTAVDELAEKVGDRNVVVGISAPGIPDGENSCISYMPGRLEGIEGFDWSSFLKRKTF
                     VLNDAVAALIAEAKLGAAKNKKNAVLLTLGTGVGGAILIDGKPYQGSFQKAGHIGHTV
                     INHEDDPDVTGMPGSLEDAIGNCTIQKRSLGKFNDTHALLEAYRLGDDFARWVWLSSV
                     RKLAIGIASVVNILSPECVVMAGGITEAGDDLFQPLANFLSVYEWRPGGSSCLILKAH
                     FGDMAGAIGAACFAVAQAANH"
BASE COUNT         1957 a         1686 c         1716 g         2121 t
ORIGIN      
        1 tcactcatat ccaggaagaa cgcatcgctc tcaagatcgg gtgaataacc aataattgca
       61 ctccagtcgt tagcagccac ctgtacacct attttcaaag ccttgccggt taagcctctt
      121 atcttgctgc gcttaattgc accttcaaac cttaatacac catttttttc ttcccacgcg
      181 cccacggtcc aaaattcact gatgttttgg tatttatagc cgtcgaaact ttcctggtcc
      241 ccgctgtgat aatatggatc gagccagtca tcgaagatcg tgccttcaag caagacttca
      301 taggctccgt tggggatttc attcgtgaga taacccgtcg acatatcaac atccgcatct
      361 atatacatgt catatatgtt tccctctccc tttgaagtat tctgttcaaa atagaaataa
      421 acattttcgc cgtcataatc atatttggcc tgtataaaat ttcctgactt gctgccgcca
      481 actacaacgt tatgcgtaac agtatcccaa tcggcgagtg aatgatcatc caatttgatc
      541 ccggatgttt ttgaaatatt gataacggtc gatgcttcgg acgtaacgcc atctgcagat
      601 gttgcataca acgtaggcac atattttcct ttgcccggat attcatgcgt cggactttcc
      661 tccgttgatt ctgttccatc gccgaagtcc cacttgtatg ttgtggcacc ctctgatttg
      721 ttcgtgaatg taactgaact gccatgcact tcgatgctgt aaaatgcaaa aggtgcgtta
      781 cctgcagagt ccttcttgca ggaagaaaat atccaaacgc acaggcaggc agaaataccg
      841 acactaaatt ttatcctggt cattgcaact cgttttaaat tgatttaagg attttgtgta
      901 cacagtgtat ttgtttgcac ttcatcgatg ggtatgtaat aaataattct cggtgaagtg
      961 ggctcgatga tcatgttatc atatcccgtc ggctttttcg agagatcgat atccgtttct
     1021 tttaaacccg gcaagtgata tccccagtag gttctgtcca tcggaagatt gttgcgataa
     1081 acatcgaacg tacgttgtcc ttcagcgaaa agttcaagcc gccgttcttt taatacaact
     1141 tctaatgcgg tagttccatt tggcaccacg ccattataca aggaaccttg caggttgcgg
     1201 ttctttcgaa tcatatctac atcatccaat gcctctttta cccggttcat ttttgcattt
     1261 gcttccgcgc gattcaaata catctcggca agccgaaaca taatcggtga actcagcgtt
     1321 gggctgccat cctggaaaga aaactttgta atgtaatata tctcgatccc attttttttc
     1381 tgaataacgc cattgccgtc tttcaacggg taaatgtaag accagcgtat gtcttcggga
     1441 tgctcgctca tcacatcgcg caatgactgc gacgcatatt cttcgcccca gccactgtta
     1501 ccgtctgagt aaagcataga agcaatagaa ccaaattttc cataatcttc ggctggcgtg
     1561 aaggccacgc agaaaatggt ctcgctgctg ttcggggcgt ccgcaaacag gtctcgaaac
     1621 gtatttttat ttgtgagttg gaacctgccc gaattgatca cttttgttgc ataatcaatc
     1681 gcatcctcat tgtcctcctc gtacaaatac actctcgaaa gcaaagccca cgcagcttcc
     1741 tttgaagcat actcaacgcc gcgcggctgc gtcatgaggt cagcagcttt ttgtgcatcg
     1801 tcgatgatct gcgcatacac atctttaacc gatgaacgtg cttttatggc cggctcactc
     1861 gtggaaagac gaagtacgat cccgtctgcg tccggatttt gcgaataagg ccgtgcatag
     1921 aagcgcacca aactaaaatg acaaaacgcg cgaagaaaat aacattcacc ttttagctga
     1981 tcgaccgtcg ggtccgggtt tgaaattttt tcagccgcct cgatcactgt attgacatcg
     2041 ttgatcactt tgtacgatat gaaccagaaa taacggctgt tggtttgagc cggagaatgg
     2101 ttcagcgaga agctgagaaa aaaaggatct tccgttactt gcccgcacac aatatcatca
     2161 ctcgcaaaat cgctcatttg aaaatactgt cgcaagtaca tattgttgtc gtcagcggtg
     2221 ccgttgaaaa ctacatgatc tttgaataat gcataagcac cattcaccgc ctgcgtcaat
     2281 ccttcaatag tgctcgttag aatatccggc gtgatcgcat cgctgggtgt aacttctttc
     2341 aggcaacccg tatccatcgt aaatattagg accgttacga aaaatatttg cagtatcctg
     2401 ttaattgctt tcattgtttt tagattagaa gttgagatta agggttaaca aaaattgacg
     2461 gttgttcgga tatttaaaat cggaaacacc gggtgttgca taaatgtcag gcgtgatcgt
     2521 tgtttgcgga tcctgtccca aaaatttcgt ccacgtgtaa acgttatcag ccgatgcggc
     2581 aacgcgcaca ttgtgcatac cgagccgctt cgaaacattt tgcggtaagt tgtatgacag
     2641 tgtaatattt ctgaggttga caaagctgcc atcttttaaa tatctcgttg acgtctctgt
     2701 ggaactcgcc gaattttgcg ggctcggatt tgttgcgttg tcgccgggtt ttgtccaaat
     2761 gctgtaaccg tcgggtaaaa ctacctggtt atagtacggc tcgttcccgt catttatcgt
     2821 gaagcgcaga atattgctga atactttgtt gccgtgcacg aagtacgcat ccacgctcag
     2881 cgcaaaattt ttgtaagaga atgtatttgt gaaatctccc tggtattttg gcaacgcgga
     2941 accaacctct tgatatgtgg cgtctgcata atttgaggtg gcttctttgc cagttatatt
     3001 tccctggtca tccttcagaa ttttctccca aagcggggcg ccggtttgtg gatcagcacc
     3061 taagtagacc ggcataaaaa attcgtacaa atttccgccg ttgcgataga tctccgagat
     3121 cgcccattct cccgttttca caaatgttgc cggcaggttc ttcagcttat ttgaattgaa
     3181 actgatatta aaatttgtga cccatgaaaa attttttgtt tgaatatttg ttgatgcgat
     3241 cgtaagctca atgcccttgt tatcgatctc acccgaattt tcccaacgct gttcaaatcc
     3301 aactgaaagc ggctgtgcaa cctggagtaa cagatctttt gtcaacgcat gatatacgtc
     3361 taccgtaaca tcgacgcgat caaagaaact cacgtctgcc ccgatgttca actggtattt
     3421 gctttcccat gttaagttcg ggcttggcag ttgcagcggt acggcgcccg gctgcgagtt
     3481 gtattgtgtg gaaagagaat acagcccgag ataacgggaa gcaccgatgt cctcagtccc
     3541 cgtaaccccg tagcttgctc ttaatttgag gttagtgatc acatcatttc ctgctaagaa
     3601 atcttcattg ctcgcaagcc atcccgcaga aatagcgggg aacgagcccc agcgcttcga
     3661 tttaggaaac gcagttgaac catctaaccg gtatgaagcc gtgagaaaat atttgttgag
     3721 ataactatag ttcgcctgcg agataaaaga aaggatagac ccttcatcat atgatccgct
     3781 tacgctcaag ttatttgata caacattcaa tacttttaaa ccaaccggca agcctctgcc
     3841 gctgccaccc aaaaattcgg ttcgtcccgt ttcataagcc acgcctgcta atccggtgat
     3901 attgtgcttg ccatgaggaa cagtaaattt gaagagattg tttaaggttg ctccatagtt
     3961 tgcaatatcc tgctcgtcaa ggaagccgct gccatgatat tctcccgcga cagttggaga
     4021 atagtacgtt gtacttttac tgtagcttgc tgcaaatctg ttcgtgctcg aaaagctgag
     4081 ccatttattg atgccaacat tcagtgacgc atcatagtta acatcgaagc cctggtacgg
     4141 atggtcggaa ttttcgatcg tatgcaatgg atttacttta tcccgcgacc accatttgaa
     4201 agtactgttg ccgtctacat atattggatt acctgtactg tcgtaaggat tgtcccacgg
     4261 catattcagg tatgcataat aaatgtcatt gtaatcatag ctcttgcctt ttacgccgct
     4321 gatgttaatg ctgtttgtaa atgatacttt atcgctgaaa tgcaaaccaa gcccggctcg
     4381 cacgttaacg cgctgaaaat tcgtgttgcg atacgttccg ttctcatcgt aataactcaa
     4441 tccaacgtaa tagtcatttt tgtctgtctt gcctgaaact gacacatagt aattctgaac
     4501 aaaggcaggg ctgaagatcg cgtcgagcca actgtaattt tggttttgca gttctggtgg
     4561 cctttcagca taaaatttaa gcaggtcaat tttatgagag ttgccggtgt cggatggaat
     4621 ataatcgcgg taaaattctt tttgatattc gtaaagctgg cttccgctca tcatgtccat
     4681 gctgccgtag tcgggtgttc ggacgccggc cgtgatcttc gcctcaaaat tcgcattacc
     4741 actgcgtgct ttttttgttg tgacgacaat tacacctgcg ttcgcttgtg agccgtacat
     4801 cgccgttgcg gctgcatcct ttaacacgct gatgctttcc acatcgttcg gatcgaaatt
     4861 tccgcctatg atgccgtcga caacatacaa tggtgtttga cttgcattca ctgaagagat
     4921 gccgcgcaat cggatctctg ctgcagaacc aggaacaccg ctgctgttta ttacttcaag
     4981 tcctgcaact tttccctgta aaagcgtacc cacatcattt gacgtaacgt ctcttaattt
     5041 atcgcctttt acaacgccga tcgatgcggt gagctcgctt cgttttttgt cgctgtaacc
     5101 aacaacaaca acttcatcca ggtcgttgtt tttttcatcg agacgaacaa cgatattgtc
     5161 gtccgtcttg ccgatgaaaa attcttttga cgtaaagccg actgcagtca cgacaatcgt
     5221 tgcggtatca gagggaatgg ttaatgtgaa actgccgtca tccgctgctg caaaatattt
     5281 agacccctgc ttaacaagta tggtcgcttt tgttacggga gttccatttg ccacggagac
     5341 cacgtttcct gaaacgctgc gcgtttgcgc atttagcacg gaacaaaaga gaagcggaac
     5401 taccagtgaa caagttcttg tgaaaagata tttcatcagc tggttacatt attaggtgag
     5461 caatcgtaat gtcaatcgtc gtcggagcag ggttaatatg aacaaagcta ataaaaaaaa
     5521 atcctggcat cgatcacagc cgcgtggttt tatttgaaaa aaacatccgg cattttttgc
     5581 tggatacggt gttttggtat ggttcccaac tgcgccgata tcgggggcgg gggatttttt
     5641 tagacggtct ccaaaaattt aattagagcc agaatatata atttcaccca agaaaggaat
     5701 tatttagatg agcgaatggc tcctcaataa aagcttcgtt atcgttggcg gtaccgcagg
     5761 gatgggcctg tcggcagcgt tggcctgcat taaagaagga gctaaagtgg ttgtcgttgg
     5821 aaaaaatgcc gaacatgttg aagaagcaca aaaacaatta ggtgacaatg gcctggtaaa
     5881 aacgggcgat gcaacgaatg agacaacagc cgaagaagcg atacaagcgt gtgtgaatac
     5941 atttggaagc ttcgatggaa tataccatgt cgccggcgga agtggccgga gatttggcga
     6001 cggccctttg catgagatta cacttgaagg atgggagaaa actttgcgga tcaatttaac
     6061 ttccctcatg ttgtcgaaca gggcagcgat aaagcatttc atggaaaaca accgcgccgg
     6121 ggtgatatta aatataagtt cgatactcgg cttctctcct tcgcctaaat tttttgctac
     6181 tcatacatat gcggctgcaa aatctgcggt cgtcggtttc agcaagtcta tagccgctta
     6241 ttatgcgccg tacaacattc gcgtcaatgt gatcgtccct tcgctgattg aaacgcctat
     6301 gtcgcaacgc gccgtacacg acgatgcgat catggaattt attaaaacaa aacagccgtt
     6361 ggacggcgga aggatcggga tgccaggtga tgtggatggt gctgcggtgt ttcttttatc
     6421 ggaccatgcg cggttcgtaa ccggacaggt ggtcgcggta gatgggggat ggagcatttc
     6481 ggaaggacaa tattaaagac atgactgtag gaatagggat agacctgggg ggcacccgca
     6541 ttaaagctgc ggcgcttgac gaaaatggaa atgtattgca acagtcgtat actcccacaa
     6601 aagatggcag tgattcaaca tggaaacaca cggtacttac ggctgtggac gagttagcgg
     6661 aaaaggtcgg ggatcggaat gttgttgttg gcatatcggc gcctggaatt cctgatgggg
     6721 aaaattcgtg catcagttac atgccgggcc gtttagaagg aattgaaggc tttgattggt
     6781 catcttttct taagcgcaaa acttttgtct taaatgatgc ggtggcagcg ttaatagctg
     6841 aagcgaaatt gggagcggca aaaaataaaa agaatgcggt gttgcttacg ctgggaacag
     6901 gagttggagg agcgatactt atcgacggca aaccttacca gggcagtttt caaaaagcag
     6961 gacatatcgg ccacaccgtg atcaaccatg aagatgatcc tgatgtaacg gggatgcccg
     7021 ggagcctcga agatgcaatt ggcaactgta ctattcaaaa acgatcgctc ggaaaattta
     7081 atgacacgca cgccttactc gaagcgtaca gacttggcga tgattttgca agatgggttt
     7141 ggctttcgtc tgttagaaaa ttggcgatcg ggatcgcttc cgtggtcaat attctatcac
     7201 ctgaatgtgt ggtcatggct ggcggtatta cggaggcggg cgatgacctg tttcaaccgc
     7261 tcgcaaattt tttatcggtg tacgagtggc gacctggagg gagcagctgt ttgatactga
     7321 aagcacattt tggagatatg gcaggagcga tcggcgccgc ctgttttgcg gtggcgcaag
     7381 ccgccaacca ctaataactc atctaagctc actcgaaaat ttttttgaat ggatgttata
     7441 catacatatt tgagcaagtg cgaggcaata atagaaacga
//
LOCUS       DASQJI010000397         6664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_352417,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000397 DASQJI010000000
VERSION     DASQJI010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6664
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352417"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VEV83_11250"
     CDS             complement(<1..639)
                     /locus_tag="VEV83_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HYK45738.1"
                     /translation="MTWKQAFTSSVGQKITMAASGIFLVLFLIVHVSVNALIWANDDG
                     DMFNRAANFLGANVVPRIIEVGLFVFFLLHIVQGLILEAENRSKRGVAYAVNYGNRGS
                     KWYSRSMGLLGTLVLLFLILHLADFWIPSRFLAMPEATLKDDGKHVHNLYVLMQARFQ
                     LLWVVIVYILGCIALAYHLAHGFQSAFKTLGVHNKRYISMLIWLGYAFAILVP"
     gene            816..2075
                     /locus_tag="VEV83_11255"
     CDS             816..2075
                     /locus_tag="VEV83_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45739.1"
                     /translation="MLRLLNILWNSFKMSVGELKNNKLRSALSLTGVAFGIFCIISVL
                     ATVNSLEYKIQSDIAALGTNTIYIDKWEYGAGDNGDYPWWRFVNRPMPKYDDVKYIKE
                     RTSLAENVAFFTSRGTTLEYENSELQNVAVFGVSNEYNRIQTVDMGYGRYFTEAEFQR
                     GNPVAIIGYNNAEELFGTADRAIGKTISFDGHRAVVVGVIQKQGQSFGPGFDYDHALI
                     LTYYFYAGIYNVLDFNSDPFIMVKGRPGIPSGALSDELKGVMRQVRRLSPKEEDNFAL
                     NDVNFMTEAVSGFFGTVNVGGWAIAGLSLIVGAFGVANIMFVTVRERTSQIGLKKAIG
                     AKSRTILLEFLLESAFLCIIGGFIGLLMVWGLAAILSAVLPFAIVISGKIISLAFSIC
                     VILGILSGIIPASIAARMNPVEAIRSK"
     gene            2148..3212
                     /gene="tsaD"
                     /locus_tag="VEV83_11260"
     CDS             2148..3212
                     /gene="tsaD"
                     /locus_tag="VEV83_11260"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HYK45740.1"
                     /translation="MIESNLQNHEDYGSPFKGRRGQGLILAIESSCDETAASVCRDGK
                     ILSNIIANQTVHEQYGGVVPELASRAHIQNIVPVVDAALSTANCQLSSLNAIAFTQAP
                     GLIGSLLVGAQFAKSLSLALNIPLIAVHHMQAHVLANLISEPKPSFPFLCLTVSGGHT
                     QIVVAHAPLELEVIGETIDDAAGEAFDKTAKMIGLPYPGGPLVDKHARNGNPKAFKFA
                     EPQVPGLDFSFSGLKTSVLYFLQDAIQKDKDFISKNVDDLCACVQYTIINILMKKLKK
                     AVEQTGIRQVCIAGGVSANSGLRNALKEYGDRHNWQTFIPPFEYCTDNAAMIAITGYY
                     KFLAKDFTELNVSPTARAEW"
     gene            complement(3377..3649)
                     /locus_tag="VEV83_11265"
     CDS             complement(3377..3649)
                     /locus_tag="VEV83_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45741.1"
                     /translation="MKRKLTIAGFALLGSFVLSVLANEAKFDYDLMTVFGLINFLLAC
                     LGIFIGLIMLLSRNRKNGLDLLAASGIVLLIGVGVCSAFPMNMRMM"
     gene            complement(3646..5103)
                     /locus_tag="VEV83_11270"
     CDS             complement(3646..5103)
                     /locus_tag="VEV83_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK45742.1"
                     /translation="MKLNFLILRFYKSIGDIMPERPYTYYDFTISLCPACLKRVDAKI
                     VFEKNNVFMLKNCREHGFSKTLIATDVEYYKNIRNYNKPSEMPLKFNTKTHYGCPYDC
                     GLCTDHEQHSCLTIVEITDRCNLTCTTCYAMSSPHYGRHRTVEEVERMLDIVVANEGE
                     PDVLQISGGEPTIHPDFFEILDIAKSKPIRHLMVNTNGIRIARDKAFAERLASYMPDF
                     EIYLQFDSFKPEALESLRGKDLTEVRMQALENLNEFNLSTTLVVTLQKGVNDDEVGKI
                     IEFALKQRCVRGVTFQPTQIAGRLDNFDPAADRITLTDVRQKILDQTNIFQPNDVIPV
                     PCNPDALAMGYALKLAGQVFPLTRYIDPAHLLDNSRNTIVYEQDEQLHQHMLKIFSTG
                     ISVDRVENNFKELLCCLPQIHAPGLNYENLFRIVIMRFIDAYDFDVRAIKKSCVHIVH
                     KDGRIIPFETMNMFYRDEKEKYVNELKEDIEIAFT"
     gene            complement(5100..5909)
                     /locus_tag="VEV83_11275"
     CDS             complement(5100..5909)
                     /locus_tag="VEV83_11275"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HYK45743.1"
                     /translation="MQFPVAIHFGQVSILLHTITEIAALFIGFRYYIHLRKKQGDAIT
                     PEKRTWIVIGAVFGAFFGSRLIGGLEDPVSMLHSRNIFWHFYSNKTVVGGFLGGLAGV
                     EIIKYFMKEKKSSGDLFTYPMILALIIGRIGCFSMGVYEDTYGVSSSLPWALDLGDGI
                     SRHPVCLYEILFLALLWIGLVRLENYYALISGARFKIFMITYCMFRFLLDFIKPHYTF
                     GIGLSTIQLTCAAGLIYYYRYIIHPKKLIDRTRNANSSAAHEETAMPKSVY"
     gene            complement(6030..6371)
                     /locus_tag="VEV83_11280"
     CDS             complement(6030..6371)
                     /locus_tag="VEV83_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor"
                     /protein_id="HYK45744.1"
                     /translation="MGKKQKADSRGFVYSTDPNFSFEHDNEQQQTLKPLEQRLKIRLN
                     TKLPAGKAVTLIDGFMGTVEDLEKLTKELKNFCGTGGSAKDNEIIIQGDQRDKVLQWL
                     FKNGYKQARKI"
     gene            complement(6381..>6664)
                     /locus_tag="VEV83_11285"
     CDS             complement(6381..>6664)
                     /locus_tag="VEV83_11285"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627919.1"
                     /note="catalyzes the formation of
                     pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose
                     1-diphosphate from nictinate D-ribonucleotide; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /protein_id="HYK45745.1"
                     /translation="LKIEIETRNVEEVRKVCAGGRGKVFRIMLDNFTPEQIAEALNLI
                     NDDFETEASGGINLENIRRYAATGVDYISVGGLIHQAQSIDLSLKAVII"
BASE COUNT         1846 a         1490 c         1498 g         1830 t
ORIGIN      
        1 aggcacgaga atggcaaaag cataaccgag ccagatgagc atgctgatat atcttttatt
       61 gtgaacaccg agcgttttga atgcactctg aaatccgtga gcaagatgat aggcgagtgc
      121 gatacaaccc aaaatataca cgatcacaac ccataaaagt tgaaatcttg cctgcatcag
      181 cacatataaa ttgtgaacgt gtttgccatc gtcttttaaa gtagcctcag gcatagcaag
      241 gaaacgagat ggtatccaaa aatcggcaag gtgcaggatc aggaacaaca ataccagcgt
      301 gcccaacaaa cccatgcttc ggctatacca tttgctaccc ctgtttccat aattgaccgc
      361 ataagcaact ccacgtttgc tgcgattttc cgcttcgagt ataagtcctt gcacaatatg
      421 cagcaggaag aaaacaaata acccaacttc aatgatgcgc ggaacaacat ttgcgcctaa
      481 aaaattcgcg gcacgattaa acatatctcc gtcatcgttt gcccagatga gggcgtttac
      541 agaaacgtgc acgatcaaaa ataaaacgag aaaaatcccg cttgcagcca tcgtgatctt
      601 ttgtcccacc gaagaagtga aggcttgttt ccacgtcata tataagcaag attagtatta
      661 aaaaatccgt cgcaaaatta tagcacaaat gccagactcg aatttaaaaa gttttgctct
      721 cagtcgcagg tttaacggtt aaagtcgtac ggaaagcccg gttccgttta tctaaaaaac
      781 atcgcactgt aatcacagtt ctttaatttt ggcacatgct gaggttgctc aacatattat
      841 ggaacagttt taagatgtca gtcggcgagc tgaagaacaa caaacttcgg agtgcgcttt
      901 cgctcaccgg cgttgcattt ggtatctttt gcattatcag cgtgcttgca acagtaaaca
      961 gtcttgaata caaaattcaa agcgatatcg ccgccctcgg caccaacacc atctacattg
     1021 acaaatggga atatggtgca ggcgataacg gagactatcc gtggtggagg tttgtgaaca
     1081 ggcctatgcc gaagtatgac gatgtaaagt acattaaaga aagaacctcc cttgccgaga
     1141 atgtcgcatt ctttacttca agaggcacta cgcttgaata tgaaaattcc gaattacaga
     1201 atgtcgccgt gtttggtgtg agcaatgagt acaacaggat tcaaaccgta gacatgggct
     1261 acggcagata tttcaccgaa gcggaatttc aacgaggcaa cccggtagcc atcattggtt
     1321 acaacaatgc ggaggaattg tttggtactg cggacagagc aattggcaaa acgattagtt
     1381 tcgatggtca tcgcgcggtg gtcgtcggtg tgatacaaaa gcaggggcaa agcttcgggc
     1441 cgggtttcga ttacgaccat gcgttgatcc tcacctatta tttttatgcc ggcatatata
     1501 atgtgcttga cttcaacagt gatccgttca tcatggtgaa gggtcgaccg ggtattcctt
     1561 caggagcact gagtgatgaa ctgaaaggcg tgatgcgcca ggtgcggaga cttagtccga
     1621 aagaagaaga taatttcgct ttgaatgatg tgaacttcat gactgaagct gtaagcggat
     1681 tttttgggac tgtaaatgtc ggcggttggg cgatcgccgg tttaagtttg atagtgggcg
     1741 ctttcggcgt tgcaaatatc atgttcgtca ctgttcggga acgcaccagc cagatcggcc
     1801 tgaaaaaagc gatcggggca aaaagcagga cgatactttt ggaatttctt ttagagagtg
     1861 cgtttctctg tatcatcggt ggatttatcg gcctgttgat ggtttgggga ctcgccgcta
     1921 ttttgagtgc tgtacttcct tttgcgatcg ttatttccgg caagatcatt tctcttgctt
     1981 tctcaatttg cgttatactc ggtattcttt ccggcattat tcccgcatcc atcgctgcac
     2041 gcatgaatcc cgttgaagca ataaggagta agtaagaacc cgatgcccca gccctaaagg
     2101 gagcatttaa gttgctgcat atttccaggc tcgattattt ttgctgagtg atcgagagca
     2161 acttgcaaaa tcacgaggat tacggttccc cctttaaggg gcggaggggc caggggctca
     2221 ttcttgccat tgaatcgtcg tgcgatgaaa cagcagcatc cgtctgtcgc gacggaaaga
     2281 ttctttcaaa cattatcgct aatcaaacag tgcacgaaca gtatggcggt gtcgttcccg
     2341 aattggcaag ccgtgcacac atacaaaata ttgttcccgt cgtcgatgcg gctctctcaa
     2401 ctgccaactg tcaactgtca tctcttaacg cgattgcctt cacgcaggcg cccgggttga
     2461 tcggcagctt attggtaggc gcgcagtttg caaagtctct ttcgctggct ttaaatattc
     2521 cattgattgc ggtacatcat atgcaggcgc acgtattggc gaatctcatc agcgagccaa
     2581 aaccttcttt tcctttttta tgtttgacgg tgagcggagg tcatacgcag attgttgttg
     2641 ctcatgcacc gctcgaactc gaggtgatcg gtgaaacaat tgacgatgcg gcgggtgaag
     2701 cctttgacaa aacagcgaaa atgatcgggt tgccatatcc cggcggacca ttggttgata
     2761 agcatgcacg aaacggaaac cctaaagctt tcaaattcgc ggagccacag gtccctggtt
     2821 tagatttttc gttcagcggg ctaaaaacat ctgtcctcta ttttttgcag gatgctattc
     2881 aaaaggataa ggacttcatt tcaaaaaatg tggatgatct atgtgcgtgt gtgcagtata
     2941 cgatcatcaa tatcttaatg aagaaactga agaaggcggt tgaacaaacg ggcattcgcc
     3001 aggtatgtat cgcaggtggt gtgagtgcaa acagtggttt aagaaatgcg ttgaaagaat
     3061 acggggacag gcataattgg caaaccttca ttccaccttt tgaatactgc actgacaacg
     3121 cggcgatgat cgcgatcact ggctactata aatttctcgc taaagatttt actgagttaa
     3181 atgttagtcc aaccgcaagg gcggagtggt agtagaaccg caactccgtt ttaaatctta
     3241 gcaaaagtta tatccactcg cggatcggcg gcgaagagat ttctcctcac gtcgaaatga
     3301 cggtgcgaag ctctaaacaa atacaaagtc agccttattt caattcgttc cgtgcttaag
     3361 ggatgaggct ctgctgttac atcatccgca tgttcatcgg aaatgcagaa caaacgccaa
     3421 cgccaataag caacacgatg ccggaagcgg cgagtagatc cagaccattt tttctgttcc
     3481 tcgacaagag cataatcagc ccgataaaaa tgccaaggca agccagtaaa aaattgatga
     3541 gaccaaaaac agtcatcagg tcataatcga actttgcctc attcgcgaga acagagagca
     3601 cgaatgagcc aagaagcgca aaccctgcaa tagttaattt tcgtttcatg tgaatgcaat
     3661 ttcaatatct tccttcaatt cgttcacata tttttccttt tcgtccctgt agaacatatt
     3721 cattgtttcg aaaggaataa tgcgcccatc tttatgtact atgtgcacac agcttttttt
     3781 aattgccctt acgtcaaaat cataggcgtc gataaaacgc atgataacga tacgaaacaa
     3841 gttttcataa ttcaacccgg gtgcatgtat ttgcggcagg cagcaaagca gttctttaaa
     3901 attgttctcc acccggtcaa ccgaaatgcc ggtactaaaa attttcagca tatgctggtg
     3961 tagttgttcg tcctgctcat aaacaattgt gttgcggctg ttatcgagca aatgcgccgg
     4021 atcgatgtag cgcgtgaggg gaaaaacctg gcctgcaagt ttcaaagcat aacccatagc
     4081 aagggcatcc gggttgcatg gaacagggat gacgtcgttt ggttgaaata tgtttgtttg
     4141 atcgaggatc ttttgtcgca catctgtcag cgtgatgcga tcagcggcag gatcaaaatt
     4201 atcgagccgg cccgcgattt gagtgggttg aaatgttacg cctctcacgc atcgctgctt
     4261 caatgcgaat tcgatgatct taccgacctc atcatcattc actccttttt gtaatgttac
     4321 cactagtgta gttgaaaggt tgaattcgtt caaattttct aaggcctgca ttcgtacctc
     4381 cgtaagatct tttccgcgca acgattccaa agcttccggt ttaaaagaat caaactgaag
     4441 gtaaatttca aagtcaggca tgtacgaggc aaggcgctcc gcaaatgctt tatctcttgc
     4501 aatgcgaatg ccgtttgtgt tgaccatcaa atgacggatg ggttttgact tcgcgatatc
     4561 cagtatctca aaaaagtcag ggtgaatcgt cggttcaccg ccgcttatct gaagaacgtc
     4621 tggctcgcct tcattagcaa caacgatatc aagcatgcgt tcaacttcct caaccgttcg
     4681 gtgccttccg taatgcggtg agctcatcgc atagcaggtg gtgcaggtaa gattacaacg
     4741 gtctgttatt tcgacgatgg tcaaacaact gtgttgttca tgatctgtgc acaggccgca
     4801 atcataaggg cagccataat gagttttagt gttgaattta agaggcatct cggaaggctt
     4861 gttgtaattc cggatgttct tataatattc aacatcggtt gcgatcagcg tcttgctgaa
     4921 accgtgttcg cggcagttct tcagcatgaa cacattgttt ttttcgaaaa caatttttgc
     4981 atcgacacgt ttcaggcaag ccgggcaaag gctgatcgta aaatcgtaat atgtgtatgg
     5041 acgttcaggc ataatatctc caatactttt atagaagcgc aggatcaaga aatttagttt
     5101 caatataccg atttgggcat cgcagtttct tcatgggcag cgcttgagtt tgcgtttcta
     5161 gttcggtcaa ttaatttctt tggatgaatg atgtaacgat aataatagat cagtcctgca
     5221 gcgcaggtta gttgtattgt tgataaacca atcccaaatg tataatgtgg tttgataaaa
     5281 tcgagcagaa agcgaaacat acaataagtg atcatgaaaa ttttaaaccg tgccccgctg
     5341 atcaatgcat aataattttc caggcgcacg aggccgatcc aaagcaacgc gaggaaaaga
     5401 atttcataca ggcaaaccgg gtggcgcgaa attccgtcgc ctaaatccaa agcccagggc
     5461 agtgaactag acacaccgta agtgtcttca tacacaccca tactaaagca accgatgcgg
     5521 ccaatgatca atgcaagtat catcgggtag gtgaaaaggt ctcctgatga cttcttttct
     5581 ttcatgaaat atttaatgat ctcaacgcct gctagtccgc caagaaaacc tccaactact
     5641 gtcttattcg aataaaaatg ccaaaaaata tttcttgagt gcaacattga aacgggatct
     5701 tcaagtccgc ctatgagcct actgccaaag aaagctccaa acaccgcccc gataactatc
     5761 catgtgcgct tctcaggggt aatcgcgtcg ccttgctttt tccgaaggtg aatatagtac
     5821 cggaagccga tgaaaagggc tgcaatttcg gtgatcgtgt gcagcaagat cgatacctgc
     5881 ccaaagtgaa ttgctacggg gaactgcagt ttggattttt taaaaggtaa acgaaaaaat
     5941 tttgaaaatt tctgatatta tcctgttatg gtaatgtact gtaaaaagca gtagccggcg
     6001 tcgttgtcat ttctcaagtc gccgtgcagt cagatctttc tggcttgctt atatccattc
     6061 ttgaacaacc attgcaaaac cttgtcacgc tgatcgccct ggatgatgat ctcattatct
     6121 ttcgcgctgc cacccgtgcc acaaaaattt ttcagctcct tagtaagttt ttccaggtct
     6181 tcaacggttc ccataaatcc gtcaatcagc gtgacggctt ttcctgcggg aagcttggtg
     6241 tttaacctga tcttcaatct ttgctccaat ggcttcaacg tttgctgctg ttcattatca
     6301 tgttcaaatg aaaaattcgg atcagtgctg tacacaaaac cgcggctgtc ggctttttgt
     6361 tttttcccca tagacgtatt ttaaattatc accgctttca aacttaaatc aatgctttgc
     6421 gcctggtgaa tcaaacctcc aacgctaatg taatccacgc cggtggctgc ataccgccgg
     6481 atattttcaa gatttatgcc gccacttgct tccgtctcaa aatcgtcgtt gatcaaattc
     6541 aaagcttcgg cgatctgttc gggtgtgaaa ttgtcgagca tgatccggaa tacttttcca
     6601 cgccccccag cacaaacctt tcgcacctct tccacgtttc tcgtttcaat ttctattttc
     6661 aaac
//
LOCUS       DASQJI010000398         7245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2810021,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000398 DASQJI010000000
VERSION     DASQJI010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7245
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2810021"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VEV83_11290"
     CDS             complement(<1..186)
                     /locus_tag="VEV83_11290"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HYK45746.1"
                     /translation="MHEISICESLFSGIEAEVDKSDFEKIREIHLKVGVLSCIEPEIL
                     MNVFSIMIADTPFQNAEL"
     gene            371..877
                     /locus_tag="VEV83_11295"
     CDS             371..877
                     /locus_tag="VEV83_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYK45747.1"
                     /translation="MTQIIGKKPVGKYLCTRIFHNKTIVLMPANTLIKRTDLLPSFVT
                     NFFNPWNEWFDGGFEKSLSIPAVNIVENEKNFKISLAVPGMKKEDLKIDVEEGMLLIS
                     AEKEEEMEDEKYNRREYNYSSFRRSFTLPDDVMKDKIEAKYENGVLELMLPKKEGAKV
                     AAKTIAVK"
     gene            complement(974..1384)
                     /locus_tag="VEV83_11300"
     CDS             complement(974..1384)
                     /locus_tag="VEV83_11300"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYK45748.1"
                     /translation="MNSYMTQSHSIYPGEFVPVLDEEEIRTHLKFSGNDYFILPSVKV
                     NDLTDTYTVDIVAPGIDREELVVYGDDNALLVGTSEERDFTYGRKGFHCHVTLPSDAD
                     TELAIAELKSGVLHFYVPKAKQFSKHPCTRIIVY"
     gene            1680..1985
                     /gene="raiA"
                     /locus_tag="VEV83_11305"
     CDS             1680..1985
                     /gene="raiA"
                     /locus_tag="VEV83_11305"
                     /inference="COORDINATES: protein motif:HMM:TIGR00741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HYK45749.1"
                     /translation="MNITIESPHVRVSQETISTIDTKLSSLLRKYGSTVMCEVLLRKE
                     NNDDQKNCHIGIKLGVPGTSLFAEETEQSFEAAFDKLIEDLKRQLQKHKEKLEEVRG"
     gene            complement(2248..2931)
                     /locus_tag="VEV83_11310"
     CDS             complement(2248..2931)
                     /locus_tag="VEV83_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45750.1"
                     /translation="MSIILQAKRLNKYFYEPEKFHVLQNVSISVHRGEFVALVGKSGS
                     GKSTLLYLLSTLDTEYEGNITICDTVVTGETQNALARFRNEHIGFVFQFHFLLPEFTA
                     LENVTIPARKLGKYSYDQIRTNAMDMLKMMDMEPFADKLSGKLSGGQQQRVAIARALI
                     NEPSIIMADEPTGNLDSSNSKIVFDILQNISRTKNKTIIAVTHDIDFANRADRIMEIA
                     DGKIVGEVA"
     gene            3181..3867
                     /locus_tag="VEV83_11315"
     CDS             3181..3867
                     /locus_tag="VEV83_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK45751.1"
                     /translation="MQPTVLNDIAAKFRQETEDHIPVTIPFNNLSLHAHLYMPQSPEA
                     VVIISHGTGSSRFSAKNNHAAQALSDNNIVALLVDLLTPKEDSMIENWFKIPLLAERL
                     KHITKWLTQYPGLKDLPVGYLGVGTGAAAALTAAVELKDEIRAVVCRSGRPDLVKPTV
                     LWQVECPTLFIVGGLDAEIIKLNTKEFKNLNCKKSIIVVNSASHAFEEPGKLHIVCEV
                     AGDWFEKYLF"
     gene            4212..4811
                     /locus_tag="VEV83_11320"
     CDS             4212..4811
                     /locus_tag="VEV83_11320"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYK45752.1"
                     /translation="MKDQITETALQQFLKHGIRKMSVQNLIAPMGISTKTVYKYFSNK
                     EDLLKHCLLKHYSELVQAFEGLKDQNKNPVAALFQMWHSAINADFGVNHIFYHDLNYY
                     YPRLQDLVLQKFFKKGYSFLEDLIRSGVKQGYFRNDITPEIIPLVINILYSSITRTGQ
                     FKKYKLTPDQLMQNTIDAYLRGICTAKGLKEFEKINQSL"
     gene            4824..6938
                     /locus_tag="VEV83_11325"
     CDS             4824..6938
                     /locus_tag="VEV83_11325"
                     /inference="COORDINATES: protein motif:HMM:NF012931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HYK45753.1"
                     /translation="MLAKKLLAIISLFAAAKASSQIESSLNLLPVPKNIQVQQGSFTL
                     TDDFSVAIHEPGADTIVVKAVNRMYQALNRRSGLYFKRRYISSKDNSAASALQIHVTK
                     IAAPFIGVDESYSLTVTSDKIILNAPTSIGALHGLGTILQLLAKNDTGEFYFPGVIIQ
                     DAPRFPWRGLMIDVSRHFMPLDVLRRNIDAMATVKMNVLHLHLTDNEGFRIESKVFPQ
                     LQNKGSNGDYYTQAQIKDLIEFAEDRGIIIVPEFDMPGHTKSWFAGHPELASAPGPYE
                     PGPPVDFHNVQQMNMSTIMQLVTTAPFPAFDPSKESTYQFIDKFIAEMSGLFPSPFIH
                     IGADENNGVVWKNNPDIVAFMQAHHIENTHALQAYFVSRVREIVKKNHKQMIGWEEMF
                     SKDIAPDATVQVWQNSAYTKKALEHGNPVLISKGFYLDQFMPAYIEYKNPELPDSNSS
                     QVRGGEAAEWTEIADKTNIETRIWPRAAAVAERLWSPASVTDTDDMYRRLFAVSEQLD
                     EQGLQHIADYERGLRRISNEHFDAVKTLADVLAPIRGYKKLFAQLGKPESVSYQTAPL
                     VQVSDIVFVDSRVKWQFRNAVRSYLVNKDAASEAIIMAFLVRWQNNHEQVKMLFAYSS
                     QLKAVEEHSKNLAAVSAIGIDALRKIKAGGSPDANWTNEKLAILKSANKSYGETELCI
                     IPEIEALVSQRLAPLPASYPIL"
BASE COUNT         2224 a         1579 c         1485 g         1957 t
ORIGIN      
        1 taactcagca ttttgaaaag gtgtgtcagc gatcataata ctaaaaacat tcatcaatat
       61 ttccggttct atacatgaca atacgccgac ctttaaatgg atctccctga ttttttcaaa
      121 gtcgctttta tcaacttccg cttcaatgcc actaaataag ctttcgcaaa tcgatatttc
      181 atgcatacag ttgcaaactt aaattgtctg cgcacgtccg cggatgataa atgtcataag
      241 atcaaacaaa ctcaaaattc aaacgactgt agtaattcaa ctggcacgag tatactgatg
      301 caccgcctga aaaaaagttt tttgcatcaa caagttgctc atcattttac tcttcaattg
      361 tattatagac atgacacaga tcataggaaa aaagccggtt ggaaaatacc tttgtaccag
      421 gatctttcac aacaaaacaa tagttcttat gcctgcaaac acgttgatca aaagaaccga
      481 cttgcttccg tctttcgtaa ccaatttttt caatccctgg aatgaatggt ttgacggtgg
      541 ttttgaaaaa tctctttcaa taccggctgt gaacatcgta gaaaacgaaa agaacttcaa
      601 gatctcactt gctgttcccg gtatgaaaaa ggaggatctc aaaatcgacg ttgaagaagg
      661 aatgctcctt ataagcgcag agaaagaaga agaaatggaa gatgaaaagt ataaccggag
      721 ggaatacaat tactcatctt tcaggcgttc attcaccctg cctgacgacg ttatgaaaga
      781 taagatagag gcgaagtatg aaaatggcgt attagaatta atgctgccaa aaaaagaagg
      841 tgcgaaagta gccgctaaga cgatagcggt caaataaaca gttgcgactg tttatcattg
      901 ccctgctgag tacggcgggg cttttttttg actgaaacaa ctaagaaaac atcagcagtt
      961 agaaacaaaa acattaataa acaattatcc gcgtgcaagg gtgtttcgag aattgctttg
     1021 ctttcggaac ataaaaatgc aacacgccgc ttttcaattc cgcaatcgca agttctgtat
     1081 ccgcgtcaga gggcaaagtt acgtggcaat gaaaaccttt acggccataa gtgaaatccc
     1141 gttcttcgga tgtacctact aaaagcgcat tgtcgtcgcc atatactacc agttcttctc
     1201 tgtcgattcc cggcgcaaca atatccactg tatatgtatc ggtaagatca ttcactttta
     1261 cacttggcaa aatgaaatag tcattccccg aaaatttcag atgcgttctt atttcttctt
     1321 cgtccagaac cggtacgaac tctcccgggt atatagaatg cgattgcgtc atgtagctgt
     1381 tcatgatacg aggattttga aaactattta caaattattt tgccaggctt gggcgatcag
     1441 ttacttattc gacctacggg gatcacatta cttgccaatc cactataatc ctataaatgt
     1501 aatacaaata acaccgcaaa acaaaataaa ttatgtgtag tgtgatcgat cacacaaggc
     1561 atttattgac gcataaaata atgagtcaca catggtgaca accatcataa aaccaagtga
     1621 ttctgattac aaataaccac ctcagcctca gatatcttag tagtgtaaaa agtacataca
     1681 tgaacatcac aatcgaatca ccgcacgtgc gcgtgtcaca agaaacgatc agtacgatcg
     1741 acacaaaact gtcaagctta ctaagaaagt atggaagcac agtgatgtgc gaagttctcc
     1801 tgcgaaaaga aaataatgat gaccaaaaaa attgccatat cggaattaaa ctaggcgtcc
     1861 ccggcacgtc gttgtttgcg gaagaaaccg aacaaagttt tgaagctgcc ttcgacaaac
     1921 taattgaaga cctgaagcgc cagcttcaga aacacaagga aaaacttgag gaagtaagag
     1981 gataaaaacc catcagggaa taaaaaacga cgaatcgctc ggcaccgaaa aacatgggtt
     2041 caaaaaatgg tgagtattgc aaatattgct accaggacgt cattttgtga ctcttgaaat
     2101 gtcgctggat gaaatgagat ctttcattac gaaaaaaatg aaagagatga acatcaacga
     2161 agccatcgca aacatcgctg taaattcttg gcgatctaaa aaggtggaaa gggtaccacc
     2221 ttctgaacgc cggcagggca gaaacggtta agccacttcg cccacaattt ttccgtcagc
     2281 aatttccata atgcggtcgg cgcgatttgc gaaatcaata tcgtgcgtta ccgcgatgat
     2341 agttttgttt ttcgttcgtg aaatgttttg caaaatatca aacacgattt tagaattgct
     2401 gctatccaaa ttgccagttg gctcatccgc catgatgata gatggttcgt ttatcagcgc
     2461 ccttgctatc gccacccgtt gctgctgacc accagacaac ttgccggaaa gcttatctgc
     2521 aaacggttcc atatccatca tttttagcat atccatggcg ttggtgcgta tttgatcata
     2581 actgtatttt ccaagtttgc gcgccggaat tgtgacgttt tcgagcgcgg taaattcagg
     2641 caacaagaaa tggaattgga aaacgaatcc tatgtgttca tttctgaacc tcgcaagcgc
     2701 gttttgtgtt tcaccggtta ccaccgtatc gcatatagtg atgttcccct cgtattccgt
     2761 atcgagtgta ctgagtaaat aaagcaaagt tgactttccg cttcccgatt taccaacaag
     2821 cgcaacgaac tcgccacgat gtacagatat cgacacgttc tgcaacacgt ggaatttttc
     2881 cggctcgtaa aaatatttgt tcagtcgttt ggcttgcaat atgatactca taagccggaa
     2941 attattgttc gtttatattc cttcaattta gtgcgcccga cgaaatggtc ggcacaaacc
     3001 taaaaactga aaatcgcatt cttcaaaact acataatcaa tgcagttttt aattctcttg
     3061 cctgtgttaa ttcctcccaa ttttacgagc aaaaaacatg aggatcatca tctccgtttc
     3121 tgatggctct cattttaatt acttatcacc tggccttatt ttgttgtata attcattttt
     3181 atgcaaccga cagttttaaa tgatatcgct gcaaaattcc ggcaggaaac agaagaccac
     3241 attccagtca ccattccttt taataatctt tcgcttcatg ctcatcttta tatgccacaa
     3301 tcgccggaag cggttgtcat catttctcac ggcacaggaa gtagccgttt cagcgcaaaa
     3361 aacaaccatg ccgcgcaagc actcagcgat aataatatcg ttgcccttct tgttgacttg
     3421 ctgacaccga aagaagatag catgattgaa aactggttca aaatcccttt gttggctgaa
     3481 aggttgaagc atatcactaa atggttaacg cagtatccgg gcttgaaaga tctgcctgtt
     3541 gggtatctcg gtgttggcac cggcgcggct gcagctttaa cagcggctgt tgaactaaag
     3601 gatgaaatac gggcagtcgt ttgtcggagc ggacggcccg acctggtgaa gcccacagtt
     3661 ttatggcagg ttgaatgccc gacgctgttt attgttggtg gcctcgacgc ggagatcatt
     3721 aaactgaaca cgaaagaatt taaaaatctt aattgcaaaa agagcattat tgttgtcaac
     3781 agcgcatcac acgcatttga agagcccgga aaattacaca tcgtgtgtga agtggcaggc
     3841 gactggtttg aaaaatattt attctgataa ccccgatttg gttttgcgac ctgacagcta
     3901 acaaaatatt tcctctaatt ccttttcttc ctttttgtga ctgacgtctt tcggaaatta
     3961 agtatatgcc cggtgcaccg aaacatgtac tcgccggaga cgccgggcgg agcatcatat
     4021 ttgcgccggt cagaagcgtt ctaccgttaa cgtcggataa gctgcaacat cctgtcttac
     4081 tattttttca tttgattttg ccctgtgggc cgcacattta catgtaaatt atgtggaaaa
     4141 tattttgtca gtaatatttt ccacataact ttgcggaaaa ttatttatta aaaatatttt
     4201 ccataacacg catgaaagat cagatcacag agaccgcctt acagcaattt ttaaaacacg
     4261 gtatcagaaa gatgagcgtg cagaatctga ttgccccgat gggcatctcc actaaaacag
     4321 tttacaaata tttcagcaac aaggaggacc tgcttaaaca ctgcctgttg aagcactact
     4381 ctgaattagt gcaggcgttc gaaggattga aagatcaaaa caaaaatccg gttgccgcat
     4441 tgttccaaat gtggcatagc gcaatcaacg ctgatttcgg cgtcaatcac attttctatc
     4501 atgacctcaa ttattattac ccacgcctgc aggatcttgt attgcaaaaa tttttcaaaa
     4561 agggttatag tttcctcgag gatcttattc gtagcggcgt taaacagggg tatttcagaa
     4621 atgacatcac tccggaaata attccgctgg tgatcaacat attatattcc tccatcaccc
     4681 gaacgggtca attcaaaaaa tacaagctta ctccggatca gctgatgcaa aatacaatag
     4741 acgcttacct gcgtgggatt tgtacagcaa aaggtttaaa agagttcgaa aaaatcaatc
     4801 aatcattata aagaacagtt atcatgttgg caaaaaaatt acttgcaatt atctctttat
     4861 tcgcggctgc caaagcctca tctcaaattg aatcatcatt gaatctactc cctgttccaa
     4921 aaaatatcca ggttcagcaa ggttcattca cccttacaga cgatttcagc gtagctattc
     4981 atgagccagg cgccgataca attgtcgtga aagctgtcaa tagaatgtac caagcgctca
     5041 accgccggtc gggactctat tttaaacgga ggtatatcag ttcaaaagac aacagtgctg
     5101 cttcggcgtt acaaatacat gtaacaaaga tcgccgctcc ctttataggc gtcgatgaat
     5161 cttattctct cacggtaacc agtgacaaaa ttattctcaa tgctccgaca agtatcggcg
     5221 cattacacgg cctcggaacg atcttgcagc ttcttgcaaa aaacgataca ggtgaatttt
     5281 attttcccgg tgtgattatc caggatgctc cgcgtttccc gtggcgcggt ttgatgatcg
     5341 atgtctcgcg acattttatg ccactcgacg ttctcaggcg gaacattgat gcgatggcaa
     5401 cggtcaaaat gaacgtgctt caccttcacc ttacagacaa tgaagggttt cgaatcgagt
     5461 ctaaagtttt tccgcaattg caaaacaaag gatccaatgg cgattattac acgcaagcgc
     5521 agataaaaga tctgatcgaa ttcgcggaag acaggggaat aatcatagtg cctgagtttg
     5581 atatgccggg gcacacaaaa agctggttcg ccggccatcc cgaactcgcc agtgcaccag
     5641 gcccctacga gccgggtcct ccagtcgact ttcacaatgt gcaacaaatg aatatgagca
     5701 cgatcatgca attggtaacc accgctccgt tccctgcatt cgatccgtcg aaagaaagca
     5761 cttaccaatt catcgacaag tttattgcag aaatgtcggg tttgtttccg tcgccgttta
     5821 tccatatcgg tgctgatgaa aacaatggag ttgtatggaa aaataatcca gacattgttg
     5881 ccttcatgca ggcacatcat attgagaaca cgcatgcatt acaagcttat tttgtgagcc
     5941 gcgttcggga gatcgtcaaa aagaatcata aacaaatgat cggttgggaa gaaatgtttt
     6001 caaaagatat tgcgccggac gccacagtac aggtctggca aaattccgcg tacacaaaaa
     6061 aggctcttga acatggcaat cctgtcctca tctcgaaggg tttttacctg gaccagttca
     6121 tgcccgctta tatcgaatac aaaaatccgg aactgcccga ttcaaattca tcgcaggtga
     6181 gaggtggtga agcagcagaa tggacagaga tcgcagacaa aacaaatatc gaaacgcgca
     6241 tctggccaag agcggcagct gtcgcagagc gattatggtc tcctgcttcc gtaaccgata
     6301 cggatgacat gtatcgcagg ttatttgcag taagcgagca actcgatgaa cagggtttgc
     6361 agcacattgc cgactatgaa agaggactgc gcagaatttc taatgagcat tttgatgccg
     6421 tgaaaacact tgcagacgtg ttggcgccga taagaggtta taaaaagctc ttcgcacaat
     6481 tagggaaacc cgaaagtgtt tcatatcaaa cagcgccact ggtgcaggtt tcggatatcg
     6541 tgtttgtgga ttcgagagta aaatggcagt tccggaacgc agttagatca taccttgtca
     6601 ataaagacgc cgcttcagaa gctattatca tggctttttt ggtgcggtgg caaaataatc
     6661 atgaacaggt taaaatgctg tttgcatatt catctcaact aaaagctgtt gaagagcatt
     6721 cgaaaaattt agctgcagtc tcagcaatcg gaatagatgc tttacggaaa ataaaagccg
     6781 gcggatctcc cgatgcgaac tggacaaatg aaaagcttgc cattttaaaa tcagcaaata
     6841 aatcgtatgg agaaacagaa ctgtgcatta tcccggaaat agaagcgttg gttagccaac
     6901 ggctggctcc tctgccggca tcctatccga tcctttaatg cttacttctt tgatccgttc
     6961 gcactgacca attgaaacta acgtctgttg tctatttccc tgatctaaat catgtattga
     7021 actatccacg atcattacaa tcatgcaccg gttcaggata attttaccgc tttattcaaa
     7081 tcaaaaacaa gttttatgga agtaaggttc tttgtggcat tgaaaggcac cgctcgtaac
     7141 caaagaaaaa tcaacaacga aattcacact atacggagaa tgctgcccgg catgtggtcg
     7201 ttcaggacgt tttgcaaaaa caatgatgtg ttcgacctgg ataag
//
LOCUS       DASQJI010000399         5497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_814277,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000399 DASQJI010000000
VERSION     DASQJI010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5497
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814277"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1210)
                     /locus_tag="VEV83_11330"
     CDS             complement(<1..1210)
                     /locus_tag="VEV83_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HYK45754.1"
                     /translation="MEEQQLIPHLFRTEYRKVVSVLCKRFGFPQMEIAEDIASDTFAT
                     AAQTWAMNGPPKNPTAWLYHVAKNKAKNYLQRDSLFKSKVATEIKKSSPGFFENEIDL
                     SAANIYDSQLQMMFAICHPAISVESQIGLSLRILCGFGIEEIADAFLTNKETINKRLF
                     RAKEKLRAQNIPIEIPGTAEINERLSAVLRTIYLFFSEGYYSVSQDQTLRKELCFEAI
                     RLAEMLTENEITNKPDVNALLALMYFHASRFEARIDKDGEVVLYDEQDSNLWNAALIS
                     KGAYYLHRATTGTQLSKYHIEAAIAYWNTQKTDSKEKWENILQLYNRLLQVEYSPIAA
                     LNRTFALSKANSVHEAIVEAEKLKLTDNHFYFMLLGELYTGIDNEKARDHFEAALSLA
                     KTNTDRQTIMK"
     gene            complement(1285..1638)
                     /locus_tag="VEV83_11335"
     CDS             complement(1285..1638)
                     /locus_tag="VEV83_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYK45755.1"
                     /translation="MEEYALIMRHEDGKKIASPEQMEIWMKQTMDWIGGIAAQNKFVG
                     GTGLLFDNAKVVRPNNLVTNGPFGEIKETIGGFITVKADSIEEAVEFAKGCPVLQGEG
                     NSMEVRRIARNDGVH"
     gene            complement(1939..3261)
                     /locus_tag="VEV83_11340"
     CDS             complement(1939..3261)
                     /locus_tag="VEV83_11340"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HYK45756.1"
                     /translation="MKIVVVGTGYVGLVTGACLAEVGTEVICVDVNEEKIRALQSGVM
                     PIYEPGLDEIVERNFKKGRLSFRTSLEESILGAEVVFIAVGTPSGEDGSADLQYVLNV
                     ASDIGKYMNGYLIIVTKSTVPVGTASKVRKAIRDALKERKANIDFDVASNPEFLKEGA
                     AVDDFLKPDRIVIGAESEKAKKLLRQLYDPFVLNGHPILFMSIPSAEMTKYAANAMLA
                     TKISFMNDIANLCELVGANVNEVRNGIGSDPRIGNRFIYPGVGYGGSCFPKDVKALIR
                     TGEDYKYELRMLKAVDAINNDQKTILFRKIRKHFNDDLKNKIFCIWGLSFKPNTDDMR
                     EAPSIVLVNALHEAGAHLQAYDPVAIKEAQQILNGKVELKEDATSAAANSDAIILVTE
                     WPEFRLPNWEVICKNMTEPVIFDGRNIYHKEDMEKRGFTYYGIGVGKK"
     gene            complement(3300..4418)
                     /locus_tag="VEV83_11345"
     CDS             complement(3300..4418)
                     /locus_tag="VEV83_11345"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK45757.1"
                     /translation="MYKIVQMVPALGWGGAQVFCIQLCNELAKYDGYDITLISMYEHD
                     PGRHLPLSMLDSKIKFITLGKKQGIDLSMFTKIYRTLKEIEPDVVHTHLHAGYYCFYA
                     YGRLRYSFKKIHTLHNLAKQDAPLHGRKMFKYFFKRNIIHPVAISEEVFKSAKAEYGS
                     SVKTLINNGSNEITPSVAFEETARRIDSLKKTPQTKIFLNVARISKQKNHRMLLECMR
                     QLEGAEADVGAIILGDCAPANEHIFEELQAKKPSNVHLLGKVSNVGDYLLHADAFVLT
                     SLFEGLPISLLEALSAGIIPICTPVGGVKNIVSKEIGFLSDDVSAGSYLHAINEYLQA
                     KPQDLQQLRENGRALYQKEFSMQRCAARYDELYHAIHN"
     gene            complement(4430..5383)
                     /locus_tag="VEV83_11350"
     CDS             complement(4430..5383)
                     /locus_tag="VEV83_11350"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HYK45758.1"
                     /translation="MSKKAVSELAPFPNTFLIGVQKAGTTTLNDWLSQHPQVYGYASL
                     KDIPLFVKFPSAEQLNKRLALETPSYDGQKVVLHSAVNYIFYPSLLEKISTAKPDAQL
                     LLILRNPVERAISSYFYFRKMLREKRDISDALLYEPQQNPEITRDNNDFTYIEHGFYF
                     RQITNCLRYFSREQLLILNYDDLKAAPHDLIKSVFHFLKIDENFYPDLTIKNVTGDLR
                     SQLLQETLLQKNKLRKWLVDHLIDPWLPVNKRKLLKNKIFELNTARQKHPEVNASDNQ
                     QIPLVQNKLREVYLHETAKLDELLGTKYCATWFGQEVTENY"
BASE COUNT         1429 a         1250 c         1113 g         1705 t
ORIGIN      
        1 ttttcatgat cgtttgcctg tccgtatttg tttttgctaa tgacaaagct gcttcgaaat
       61 ggtctcttgc cttttcatta tcaataccgg tatagagttc tccgagaagc ataaagtaaa
      121 aatgattatc tgtgagcttc aatttctctg cttccacgat ggcctcgtgt acgctgttgg
      181 ctttcgaaag tgcaaacgtt cggtttagcg cggcgatcgg tgaatattca acctgcaaca
      241 aacggttgta caactgtaaa atattctccc atttttcttt tgaatcggtc ttttgtgtgt
      301 tccagtaagc gatcgcagcc tcaatgtgat atttcgaaag ttgggtccct gttgttgccc
      361 tgtggagata ataagcacct ttgcttatca atgctgcatt ccatagattg ctatcctgct
      421 cgtcatacaa aaccacttcg ccgtctttat caatgcgcgc ctcgaatcgc gaagcgtgaa
      481 agtacatcag cgcgagcaat gcatttacgt ccggtttatt cgtgatctcg ttttctgtaa
      541 gcatttcggc gagacgtatc gcctcaaaac agagctcctt acgtagcgtt tggtcctggc
      601 ttaccgaata atagccctca ctgaaaaaca agtaaattgt tctgagcacc gctgatagtc
      661 gttcgttgat ctccgctgtg cctggaattt cgatcggtat attctgagct cgcagttttt
      721 cctttgccct gaataatcgt ttgttgatcg tttctttgtt cgtaagaaaa gcatcagcaa
      781 tttcttctat tccaaatcca cacaaaatac gaagcgataa cccgatttga gattcaaccg
      841 aaatcgcggg atgacaaata gcgaacatca tttgcagctg gctgtcgtaa atgtttgccg
      901 cagaaagatc gatctcattc tcaaaaaacc cgggcgacga tttttttatt tcggtagcga
      961 ccttactctt aaacaacgaa tcacgctgca gataattttt tgctttattc ttagccacat
     1021 ggtagagcca cgccgtcgga ttttttggag gtccgttcat tgcccacgtt tgagcggcgg
     1081 tggcgaaagt atcactggcg atatcctctg caatttccat ttgtggaaag ccaaaacgtt
     1141 tgcacaagac agaaaccact tttcggtatt cggtcctgaa caaatgtggt attaattgtt
     1201 gctcttccat ctgatctcct aaagcaaaca atcaaaagat aacaaaagct ccgcacaaag
     1261 ttgattgaac ggagccttgg atctctaatg aactccgtca tttcgcgcaa ttcgccgcac
     1321 ttccatgcta ttgccttcgc cctgtaagac cgggcaacct tttgcaaact caacggcttc
     1381 ttcaattgaa tctgccttta cggtgataaa gcccccaatc gtttctttta tctcgccaaa
     1441 aggaccattc gtgacaagat tgtttggtct tacaactttt gcgttatcga aaagtagccc
     1501 ggtgccgcca acaaacttgt tttgcgctgc gatcccaccg atccaatcca ttgtttgttt
     1561 catccaaatt tccatttgtt ccggcgaagc gatcttcttc ccgtcttcat gtctcatgat
     1621 caatgcatac tcttccattt tgttaagttt taatttttat aatgaattta ttgttataac
     1681 aaatgaggtt tgttgaattg gacacgtaaa aaaattattt tctaaccttt ttgaaacatc
     1741 gttcaacagc gtctggtgag ccgtattggt ttcctcgatt taatttcgca atgcacgttc
     1801 aaaagataca accacgaaat gagcaagtaa aacagtaatg aaagtatgag gagggaaaca
     1861 gagtgatgga tcaggaccgg accaaatgaa gaatcaggca caccttttca agaaaaccga
     1921 gatgcaaatt aaagtcgctt atttttttcc cacaccgatt ccatagtaag taaacccacg
     1981 cttttccata tcttctttat gataaatatt gcggccgtca aagatgacag gctcggtcat
     2041 atttttacaa attacttccc agtttggcaa acgaaattcc ggccattctg taaccaaaat
     2101 aatagcgtct gaatttgcgg cagcggaggt agcatcctcc tttaattcga ccttcccatt
     2161 caaaatttgc tgagcttctt ttattgcaac aggatcataa gcctgcaaat gtgcaccggc
     2221 ttcatgcaaa gcatttacta aaacgataga tggcgcttcc cgcatgtcgt cagtatttgg
     2281 tttaaacgat aagccccaaa tgcagaaaat tttatttttc agatcgtcgt tgaaatgctt
     2341 cctgatcttg cgaaacaaaa ttgttttctg atcgttgttg atcgcatcaa ccgctttcaa
     2401 catcctgagc tcatacttgt aatcttcccc ggtacggatc agggccttta catcttttgg
     2461 aaagcatgac ccgccgtaac caacgcccgg ataaatgaaa cggttcccga tgcgcgggtc
     2521 tgacccaatg ccgttgcgta cttcgtttac gttggcaccc acaagctcgc aaagattagc
     2581 aatgtcattc atgaacgaga tctttgttgc aagcatagca ttggcggcat attttgtcat
     2641 ctcagccgaa ggaatgctca tgaataaaat cgggtggccg tttagcacga atggatcgta
     2701 caactgtcgc aataattttt ttgccttttc gctttcggcg cctatgacaa ttcggtccgg
     2761 tttcaaaaaa tcgtcaacgg ccgccccttc cttcaggaat tcggggttcg aggccacgtc
     2821 aaaatcgatg ttcgccttgc gttcttttag agcatccctg atcgctttcc tcaccttcga
     2881 agcggtgcct acaggcactg tgctttttgt aacaatgatg agatagccgt tcatatattt
     2941 tccgatatcg ctggctacat ttaatacata ttgaagatct gcgctgccat cttctcctga
     3001 tggcgtgcct acagcaataa aaacaacttc agcgcccagt atagattctt caaggctcgt
     3061 tctgaagcta agccttcctt tcttaaaatt gcgttcaacg atttcatcga gacccggctc
     3121 gtagatcggc atgacgcctg actgcaatgc gcggatcttt tcctcattca catccacgca
     3181 gatcacttcc gttccaactt ccgccaaaca cgcgccggtc acgagtccta catatccagt
     3241 tccaacaaca acaattttca tgaattagat tttacgggct tgcaaaaata agcgttcatt
     3301 tagttatgga tagcatgata taattcgtca tatcgcgcag cgcagcgttg catgctgaat
     3361 tctttttgat acaatgctct cccattttcc cgcaattgct gcaggtcttg cggctttgcc
     3421 tgcaggtatt cgtttattgc gtgcaaataa gaacctgcgc taacatcatc gctcaaaaaa
     3481 ccgatttctt ttgagacaat attttttaca ccaccaaccg gggtgcaaat aggaataatg
     3541 cctgcagaaa gcgcttcgag taaactgatc ggcagccctt caaaaagcga cgtgagcaca
     3601 aatgcgtctg catgcaatag ataatcaccc acattcgaaa cttttcccaa caggtgaacg
     3661 ttagatggtt tttttgcttg caattcctca aagatgtgtt cgttggctgg tgcacagtcg
     3721 ccaaggataa tggcaccgac atcagcttct gcgccctcca attgccgcat acattcaagc
     3781 aacatccggt ggtttttttg cttgcttatc ctcgctacat tcaaaaatat ttttgtttgc
     3841 ggtgtctttt ttaacgaatc tattcttcgg gctgtttcct caaaagcaac agaaggcgtg
     3901 atctcgtttg aaccattgtt gataagtgtt ttcaccgatg aaccgtactc ggcctttgcg
     3961 cttttgaaaa cttcttcaga gatagcaaca gggtgaataa tgttccgttt gaaaaaatac
     4021 ttaaacattt ttcgtccgtg cagtggtgca tcctgttttg ctaaattgtg cagtgtatga
     4081 atttttttga atgaataacg caacctgcca taagcataaa aacaatagta tcctgcatgc
     4141 aggtgcgtat gcacaacatc aggttcgatc tcttttagcg tccggtaaat ttttgtgaac
     4201 atgctcaggt cgattccctg ctttttaccc agcgtgataa attttatttt gctatccagc
     4261 atggaaagag gcaaatgcct gccagggtcg tgttcgtaca ttgagatcaa tgtaatatcg
     4321 taaccatcgt attttgccag ttcgttacac aattgaatgc aaaatacctg tgcacctccc
     4381 caacccaacg ctggcaccat ctggacgatc ttgtacatag gcggctctgt tagtagtttt
     4441 cggtcacctc ctgaccgaac caggtagcgc agtattttgt gccgagcagt tcatcgagct
     4501 tggctgtctc gtgcaagtaa acttcccgca atttgttttg tacaagaggt atttgttgat
     4561 tgtctgacgc gtttacttcg gggtgttttt gtcgcgcggt gttgagttca aatattttat
     4621 ttttaagaag tttcctttta ttgaccggca gccagggatc gatcaaatgg tccaccagcc
     4681 atttcctgag tttatttttt tgcaataatg tttcctgcag caactggctt ctcaggtctc
     4741 cggtcacatt tttaatagtg agatcgggat aaaagttttc atcgatcttc aaaaaatgaa
     4801 aaaccgattt tatcaaatca tgcggtgcag ctttcaaatc atcataattt aagatgagaa
     4861 gctgctcacg ggagaagtac cgaagacaat ttgttatttg tcgaaaataa aagccatgct
     4921 caatataagt gaagtcattg ttgtctcttg tgatctccgg gttttgttga ggttcataca
     4981 gcagcgcgtc gctgatatcg cgtttttcgc gcagcatttt gcgaaaataa aaatacgatg
     5041 atatcgcccg ttcaaccggg ttacgtaaaa tgagcagcaa ttgtgcatcg ggttttgcag
     5101 ttgaaatttt ttcaagaagc gacggataga aaatatagtt tactgccgag tgcaacacaa
     5161 ctttttgccc atcgtatgaa ggcgtttcca gggcaagcct tttatttagt tgttcggcgg
     5221 atggaaattt tacaaaaaga ggaatgtctt ttaacgaagc atatccatac acttgcggat
     5281 gttgagaaag ccagtcattc agcgtcgtgg tgcctgcttt ttgaacacct attaaaaaag
     5341 tatttggaaa cggtgcaagt tcgctgaccg cctttttgct catgctctta ttatttttac
     5401 cgctgattat tttcgcgtct tcatcaacgc tcaactacaa accagggatt gagcaggttt
     5461 tctttgttgt atttaagttc ggtgcctgtt ttgtaat
//
LOCUS       DASQJI010000400         6715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_45760,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000400 DASQJI010000000
VERSION     DASQJI010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6715
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45760"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1890
                     /locus_tag="VEV83_11355"
     CDS             <1..1890
                     /locus_tag="VEV83_11355"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45759.1"
                     /translation="GNSGTISGTNFIGTTDAQSLMFKVNNQKAGYLDSDSTKGNTTFG
                     YLGLSRISTGKFNTAIGNQALYSNKTGTGNIANGAYTLYSNTTGTGNVAVGRGALYSN
                     TTGNYNTAGGHNALYYNTTGYSNVAIGVRALYSNTVRNNLVAIGDSALYNNGNGVTIS
                     YEATENTAIGSKALYSNTAGYNNTASGYRALFSNTTGYDNTANGSSALYNNTDGNYNT
                     ATGNYALYNNKTGDYNTATGYEALYYNTGSENTANGYHALWRNTTGRANTANGMFALF
                     HNTTGYQNNAFGERALEENTIGNYNTAIGDYALSNNTTGTGNVALGRNGLYINYTGNE
                     NTALGFGADVSTVNLMNATVIGSRAIVDASNKVQVGNDEVTSIGGQVGWTTFSDGRYK
                     KNIKEDVQGLGFINSLRPITYTVDITSLNEYYNQGTKHDSSYEKMKAIMRPSADAASR
                     IVYNGFIAQEVEAAAKKLNYDFSGVDKPQTKDGLYGLRYADFVVPLVKAVQELSAKND
                     AKDAEINDLKTRLAKLEAMMNVQNTRSNQQAINITSASLQQNVPNPFNHTTAIAYTLP
                     QEYSSAKIVITNKVGAVLKEINLSGYGKGSSQIDATTLSAGAYSYSLYVDGRLIDTRQ
                     MVLTK"
     gene            complement(2786..3193)
                     /locus_tag="VEV83_11360"
     CDS             complement(2786..3193)
                     /locus_tag="VEV83_11360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45760.1"
                     /translation="MTAQITDSIMINDDVHMMYGWPLEQYWDRHNNKPPLYGSKTAMY
                     RRGYYAKLSIEDARLYLIDFYGSTMNMETIYPLVERSLHDLFPGAGKVFAEWYTGDIQ
                     IPMGNQIDYVHYGYGRSYIRVLHDCTRGEWSSS"
     gene            complement(3274..3498)
                     /locus_tag="VEV83_11365"
     CDS             complement(3274..3498)
                     /locus_tag="VEV83_11365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45761.1"
                     /translation="MKLYSQLAKKGTTHNSVRIGQLNKVKPEKDSAILSYEQYNDLYF
                     ADYYFKKDKLIKFRFGEDIRNALHITRYLQ"
     gene            complement(3495..4406)
                     /locus_tag="VEV83_11370"
     CDS             complement(3495..4406)
                     /locus_tag="VEV83_11370"
                     /inference="COORDINATES: protein motif:HMM:NF024298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45762.1"
                     /translation="MKSKRNTELGKAQTLLWSADWSADDKLIAIGGDDSLLRIFDGKY
                     LKQMKTYRINSMIRQVSWHPKNHSIAIATAGNQVSILNTESGKFIKLEGVTNGARAIG
                     WNFNGELLATADNEGLIKIWDVKGNLLRVIKKEDTNSYFSLHWHPYKNIIAVSGDDIR
                     IVDTSGTTLNVIKHRKENTGILAIRWHPEGEFFSTGDYGHDQEGVKSILQFWKPDGTL
                     MKTIYGSKAEYRNIQWNKEGTQLATASDALRIWNKNGDLLFSGIAEELLWGLDWNSKS
                     DHVITTSINGRIKLWNAQAKSIMKTTE"
     gene            5439..6143
                     /locus_tag="VEV83_11375"
     CDS             5439..6143
                     /locus_tag="VEV83_11375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK45763.1"
                     /translation="MNTSIKTALAAVGLLVAFACQKENINRQLPTHDFDATDVVAGRY
                     ASVRIGTQRWMTKNLDVNHYRNGDHIPQVRRKADWDTLTTGAWCWFNNDSVTGAVYGK
                     LYNWYAVNDPRGLAPTGWHVPSDAEWDTLSTHLGTNAGGKLKDTGTLEAGTGLWYKPN
                     KGATNKTGFTALPGGFRGSNGTFFNIWSYGAWWSSSEFSTNNAWYVSLSYYSGDISKF
                     VTDELREGQSVRCLRD"
     gene            6353..>6715
                     /locus_tag="VEV83_11380"
     CDS             6353..>6715
                     /locus_tag="VEV83_11380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45764.1"
                     /translation="MNTTIKRGFAALLLLAISCTKDNLKSSSTITSRNLDQSAAGHWI
                     GQHYAGGVIFYIDSTGQHGLIADTADFRKLPWWNGRYTITGATKTGIGSGKSNTDKII
                     LSQGDSGKYAARKCSNSKR"
BASE COUNT         1901 a         1484 c         1421 g         1909 t
ORIGIN      
        1 ggcaatagcg gaacgatttc cggtacaaat ttcattggca ccaccgatgc acaatcgttg
       61 atgtttaagg tgaataacca gaaggccggc tatttagata gtgattccac caaaggaaat
      121 acaacattcg gttatctggg attatcgcga attagcaccg ggaaattcaa tactgcaatc
      181 ggaaaccagg cactctattc gaacaaaacg ggcacaggaa atattgcaaa tggagcctac
      241 accctatatt caaacactac cggaactggt aacgtggccg tcgggcgcgg tgccttgtac
      301 tccaatacaa cgggtaatta taacacagca ggaggtcaca acgcacttta ttataacact
      361 acgggatatt ccaatgttgc aattggagta agagcgcttt acagcaatac ggtccgaaac
      421 aacttagttg ctattggcga cagcgccctc tataataacg ggaatggagt tacgatttct
      481 tacgaggcga cagaaaatac agcaataggc agtaaggccc tttattccaa tactgcaggg
      541 tataataaca ctgcaagtgg gtatcgcgca ctgttttcta atacaaccgg atatgacaat
      601 actgcgaatg gaagtagtgc tctgtataac aacactgacg ggaattacaa taccgcgact
      661 gggaactatg ctctttataa caacaaaacg ggggactaca acactgcgac tggatacgag
      721 gccctttatt acaataccgg gtctgagaac actgcgaatg ggtatcatgc cctttggagg
      781 aataccacgg gacgtgctaa taccgcaaat ggaatgtttg ccctatttca caacaccacc
      841 ggatatcaaa acaacgcttt tggagaacgg gccctcgaag agaacaccat tgggaattac
      901 aacactgcaa ttggcgacta tgcccttagt aacaacacca ccggaactgg taacgttgca
      961 cttggtagaa atggccttta tattaactac accgggaatg aaaatacagc cttaggtttt
     1021 ggtgccgatg tctcgacagt aaatttaatg aatgctactg taatcggcag ccgtgcaatt
     1081 gtagatgcaa gcaataaagt gcaggttggg aatgatgagg taacatctat tggtggacaa
     1141 gtgggctgga caacttttag tgatggcagg tataaaaaga atattaagga agatgtacaa
     1201 ggtctcggat ttattaacag cctgcgacct ataacttata cagttgatat aaccagtttg
     1261 aatgaatatt ataatcaagg aacaaagcat gacagctctt atgaaaagat gaaagcaatt
     1321 atgcggccat cagcagatgc agcaagcaga attgtgtaca atggatttat tgcgcaggaa
     1381 gtagaagccg ccgcaaagaa actgaactac gatttcagtg gtgtagataa accacaaacc
     1441 aaagatggat tgtacggatt gcgttatgca gattttgtgg tgccactggt gaaggctgtg
     1501 caggaactat ctgcaaagaa tgatgcaaag gatgctgaga tcaacgacct taaaacccgg
     1561 cttgcaaaac tggaagcgat gatgaatgtg caaaatacaa gaagcaatca gcaagcaatc
     1621 aacattacaa gtgcttcatt gcagcaaaat gtaccgaacc cgtttaatca tacaacggct
     1681 attgcttaca ctttacccca agaatacagt tcagccaaaa tagttataac aaataaagtg
     1741 ggcgcagtac taaaggagat aaatctttcc gggtatggca aaggcagttc gcagatagat
     1801 gccactaccc tttcggcagg cgcatacagt tactcattgt atgttgatgg aagattaatt
     1861 gacaccaggc agatggtact gacgaaataa gagacacact tgcacttgaa tacacacgta
     1921 ttaatgtcgg caagagcgtc ggctttgtga gcctccgatg ccctcctaag gtcggaaagg
     1981 ccacacattt ttcgctcacg cacggcctca gctctcgcta aaggcttaca cagaaaactt
     2041 aagcctttcc ttcgccccgc tgtccgcaac ttaaacataa ttatagttat cgtcgaagcc
     2101 gcgtttggcg cgcccgtgca tcttaataga cctgttgatt agatggtacc agcactcacg
     2161 cccgggcgca tgaattgatt tgagcgcctt gccaataact gactgttatg ttaagtagca
     2221 ggcacgggct ctctcacaag aaaaaataaa agcctccgca ctcgccctgt ttatattatt
     2281 tgctgtgctg gaactcttaa attttcgatt tcttgattag tttgaaaggt gcagaaacat
     2341 ttggttctaa gattagctct gaagggttaa ttgatacgat tttattttcc gtttcgtcta
     2401 aatgcagata aaaatggccg gtttcatatg tgattttata acggaattga acgggtagcg
     2461 aggtgctaat atcttgtttt aacaagcatg ttgaatattc cgtcccacga ttgaatgaaa
     2521 agtaccatat agtgccattt tgcggactac tccataatcc tgcaacaaaa tcaaagatga
     2581 cctcgacagt tagtgcttgt gtcgtcatgt gtgcaagata gctatgtgca caagttcatt
     2641 ttgagtcaaa agactcattt tccgtaaatg gcgaacatag ctactgcatt cctatgaagc
     2701 atacagccat ccttgatggt tgttttccaa accggcattt aagcacgact gcgacggtaa
     2761 ttactccatc acaaacatgc ccggatcaac tactactcca ttctccacgt gtacagtcgt
     2821 gcagtactcg aatatagctc ctcccatacc cataatgaac gtaatcgatc tggttgccca
     2881 tcggtatctg tatgtcgccg gtataccatt cagcaaagac tttaccagca ccggggaata
     2941 gatcgtgcag cgagcgctct acgagcggat aaatagtttc catgttcatc gttgagccgt
     3001 agaaatcgat caggtacagc ctagcatcct caatgctcaa ctttgcatag tagcctctac
     3061 ggtacatagc ggtctttgag ccatacagcg gaggcttgtt gttgtgcctg tcccagtact
     3121 gctctaaagg ccagccgtac atcatgtgca cgtcgtcgtt gatcatgata ctatcggtta
     3181 tttgtgccgt catgttgcag tttaattatt aacgtcaagt cccaacagtt ggtgagtaaa
     3241 catttgcggc cgattggtct ttcgtcagcc ctgctattgc aaataccgtg ttatgtgcag
     3301 tgcattacgg atatcttctc caaacctaaa tttgatgagc ttgtcctttt taaaataata
     3361 gtccgcaaaa taaaggtcgt tgtattgttc gtatgataag attgcgctgt ccttttcagg
     3421 ctttaccttg tttagctgac caattcttac gctgttgtgc gttgtacctt ttttcgctaa
     3481 ttgactatat aatttcattc cgttgttttc attatcgatt tagcttgtgc attccaaagt
     3541 tttatacgtc cattaatgct tgttgtaata acatggtcgg atttactgtt ccaatctaat
     3601 ccccacaaca actcttcagc aataccgctg aataagaggt cgccattttt attccatata
     3661 cggagtgcgt cactcgcggt agctaactgt gtgccttctt tattccattg aatatttcta
     3721 tattctgctt tacttccata gatcgttttc attaacgtgc catccggctt ccaaaattgc
     3781 agaatggatt ttacaccttc ctgatcatgt ccatagtcac ctgttgaaaa aaactcacct
     3841 tcaggatgcc atcggatagc cagtatacct gtgttctctt ttctgtgttt gatgacgttt
     3901 aatgttgtac ccgatgtatc cacaattcga atatcatccc cactcacagc gatgatgttt
     3961 ttatagggat gccagtgtaa tgagaagtag ctgttggtgt cttccttttt aattactcgt
     4021 agcaaattgc ctttcacatc ccagattttt atcaaaccct cgttatctgc tgtggcaaga
     4081 agctctccat tgaagttcca tccaatggct cgtgcaccgt tcgtgactcc ttccaatttg
     4141 ataaacttgc ctgactctgt attcaaaata cttacctggt tgccagccgt tgctatggcg
     4201 atactatggt ttttcggatg ccaactgact tgtcttatca tactatttat acgataggtt
     4261 ttcatttgct tgagatattt gccgtcaaaa attcttagca agctatcgtc gccgccaatt
     4321 gcaatcagct tgtcatctgc actccaatca gcactccaaa gcagtgtttg ggctttacca
     4381 agttcagtat tgcgttttga tttcatgacc tgtgaacagg cgataaatgt gagtaaaata
     4441 ataggcgata aaattagtgc tgcaagtctc aagagttaaa tctagtttgt ttggagtaat
     4501 cggagttgac gcacaacgaa aaagtatttg cgatggcaag atatttattg aacgtccagc
     4561 ttgagcaatg cttcattgaa aaattatcgt tgaagataac atttgcagcc taattattaa
     4621 cgtcaagccc gagctgccgc tgagtagaga tttgcagccg attgatgttt cgtcagccct
     4681 gctattgcaa atactcatgt tggttgctgt actttaccaa gtcaatgaga agttgttctg
     4741 ggattttttc ttcgagcttc tctaactttt tctcgtctta cgaatatctc agccattaac
     4801 ttacctaagt cagtgtcgtt tgcaatttct gtccttgccc acacaccaag tttcaaaatc
     4861 cattgaaatt cttctgatga ataatgccat ctgtaattgt tgcacgtctt acatgctggt
     4921 agaaaattgt ctgttatgct cgttcctcca ctcgagtatg attgcacatg atctgcttca
     4981 aattttccaa ccaaaatttc ttgtccgcac acatggcact tgccgcccgt ttttagataa
     5041 atgatttgac gttctttttt tgtcaaacga tattttcttg cgtctttaat tttcgcgcct
     5101 tccctcagag tatgaagtcg cctaagctcg cgttgaaaaa ttgttggcgt gtcaatgtat
     5161 ggtaactcgt tcatggcgaa gtgtaagctt tattttcgaa gattgacttt tctacaggtt
     5221 gcaaattact ttaaacgatt ttcgaactgc agggtgttcg ctgcgtaaaa gattagagct
     5281 tgctcgcaac cgatcctgca cttacaacat tgcgaataaa tgtgacccca atgacctcgg
     5341 ctatcgcctc gaattgccta tccgctcctg caaatacgcg gaaacgatct tatcttcagt
     5401 cagcaaatca aatctattct acctctaaat tcatcaacat gaacacatcg atcaaaactg
     5461 cactcgccgc cgttggattg cttgtcgctt ttgcttgtca gaaagaaaac atcaatcgtc
     5521 agctcccaac ccatgatttt gatgcaacgg atgttgttgc cggtagatat gcctccgtac
     5581 gtatcggtac gcaaaggtgg atgactaaaa atttagatgt caaccattat agaaacgggg
     5641 accacatacc acaggtaagg cgcaaagctg actgggatac attaaccacc ggtgcgtggt
     5701 gctggtttaa caatgactct gttaccggtg ctgtctatgg caaattatac aactggtatg
     5761 ctgtaaacga tccaagagga ttggctccta caggctggca tgtacccagt gatgctgaat
     5821 gggacacact atcaacacat ttagggacca atgcgggtgg caaattgaaa gataccggaa
     5881 cccttgaagc tggcaccggc ctgtggtata agcctaacaa aggtgctact aataaaactg
     5941 gcttcacagc gcttccgggc ggcttccgtg gcagcaatgg tacattcttc aacatttgga
     6001 gttacggcgc ctggtggagt tcttcagagt tcagtactaa caatgcctgg tacgtgagcc
     6061 tgagttacta cagtggcgac atcagcaagt tcgttaccga cgaattgcga gagggccagt
     6121 ctgttcgctg ccttagggat tgaaagagtg atgcctcggc tatcgcctcc gaagcccctc
     6181 cccttcggct cggatagccg aacttctcgg ctgttataga cagcgatccg ctaaatatcg
     6241 tcatttaacg gagaacaatt agtggtttaa ctgtgatcac tcaaaaatcc tgataatacc
     6301 ttcctatacg taatgacgat taccgtttct ctcacgttaa aactatctcg ccatgaacac
     6361 aacgatcaaa agaggattcg cagcgctctt gttgttagcc atctcctgta ctaaagacaa
     6421 tcttaagagt tcatctacaa taacctcacg aaacttagat cagtctgcag cagggcattg
     6481 gattggtcag cactacgcgg gtggagttat cttttacatt gatagtacag gacaacacgg
     6541 gttaatagct gatactgccg actttcgtaa acttccatgg tggaatggaa gatacaccat
     6601 cacgggggca acaaaaacag gtataggttc aggaaaatcg aacaccgata aaattatatt
     6661 atcccaaggt gattccggaa aatatgcggc gcgtaaatgc tcgaactcta aaagg
//
LOCUS       DASQJI010000401         3278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_506258,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000401 DASQJI010000000
VERSION     DASQJI010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506258"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VEV83_11385"
     CDS             <1..492
                     /locus_tag="VEV83_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HYK45765.1"
                     /translation="VKQAQDEGYTEPDPRLDLGGTDVMRKILILAREAGEHIEMDDIS
                     NSAFLPASCFEGSVENFYEEMRKQEAHFKQLYEEAAAKNCKLKFVAEFNSTPSADGRK
                     AAVGLQHIPPNSDFYHLYGKDNIVLFYTQRYPEQPLVVKGAGAGADVTASGVFADIMR
                     VAS"
     gene            548..1942
                     /locus_tag="VEV83_11390"
     CDS             548..1942
                     /locus_tag="VEV83_11390"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HYK45766.1"
                     /translation="MRPSFLYTTEYSPLGDEGMNMHYGAHPLIFKKAEELRNKMTHAE
                     ELLWNYLKSNEWNLKFRRQHPLSIYVADFYCHQLRLVIEIDGSIHEKEDVKRNDAERE
                     RNLREFGLTILRFKNEQVITKPEYVLQQIKVNIIRLQKLLLTTKSQQDSSNSPLQGPG
                     ASVSVLSPATVANIVCGFDILGFALNEPCDELKVEIVDEPGVHIINDDEYDLPTEPER
                     NVSGASLLALLDETKDIRGFMLTSKKNIKPGSGIGSSAASAAGAVLAANVLLGNRYSK
                     EDLVRFAMNGEKVACGVKHADNIAPCLYGGITLIRSILPLDIVTLDAPPLHVTVVHPQ
                     IEVRTSDARQILKQQVQLKDAIRQWGNIAGLVAGFIKHDYDLISRSLEDVIIEPIRSI
                     LIPGFDEVKKNSKEAGALGGGISGSGPSIFMLSKDAETAKSVESAMKEVFEKLGIAYH
                     THVTTINKEGVKVL"
     gene            2135..2572
                     /gene="tnpA"
                     /locus_tag="VEV83_11395"
     CDS             2135..2572
                     /gene="tnpA"
                     /locus_tag="VEV83_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYK45767.1"
                     /translation="MSYVKIWVHAVWGTKNRVPLLKPPVLEKVCSHISANAKEKGIYI
                     DRINGYDEHIHILMLLKSEYSISKQMQLLKGESAYWANKTQLLKNKLEWADKFFAASV
                     SDRQVDSVRAYIDNQQLHHQKLTFAEEYKHFLESLGYSEEDFG"
     gene            2832..>3278
                     /locus_tag="VEV83_11400"
     CDS             2832..>3278
                     /locus_tag="VEV83_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HYK45768.1"
                     /translation="MHYYSLNDPSHKVNFSEAVLRGQAPDKGLYFPSYIPELSKNFLQ
                     HIYNLSKEDLAFTIMKPFVGDSIPDDVLRHITAETVNFDFPLVKVGENIYALELFHGP
                     TLAFKDVGARFMSRCLGYFNRNSDKHTTVLVATSGDTGGAVANGFLG"
BASE COUNT          954 a          651 c          830 g          843 t
ORIGIN      
        1 gtaaagcagg cgcaggatga aggctatacc gaacctgatc cacgtttgga cctcggcggt
       61 accgatgtga tgcgaaaaat attgatcctc gcacgtgagg caggcgagca tatcgaaatg
      121 gatgatatca gcaacagcgc atttctaccc gcttcctgct ttgaaggaag cgtcgaaaat
      181 ttttatgaag agatgcgaaa acaggaagcg catttcaaac aattatacga ggaagcagca
      241 gccaaaaatt gcaagttgaa atttgttgcg gagtttaatt ccactccgtc agcagatggg
      301 cgcaaggctg ctgttggatt gcagcacatc cctccgaatt cagattttta tcatttatac
      361 ggcaaggata atattgtttt gttttacacg cagcgctatc ctgaacaacc gttggtagtg
      421 aaaggagcgg gcgcgggtgc cgatgttacg gcgagcggag tttttgccga catcatgagg
      481 gtggcatcgt aagatgcccc accctaaagg gagaagagag attgagggcg aaggtatttt
      541 tgtacaaatg agaccaagct ttttatacac cactgagtat agcccgttag gagacgaagg
      601 catgaatatg cattacggtg cccatccttt gatttttaaa aaagctgaag aacttaggaa
      661 caaaatgacc catgccgaag aattattgtg gaactatctc aagtcaaacg aatggaattt
      721 aaaatttaga agacaacacc cactttccat ttacgttgca gatttttatt gtcatcagct
      781 aaggcttgta attgaaattg acggttctat tcacgaaaag gaagatgtga aaagaaatga
      841 tgccgaaaga gagagaaact taagggagtt cggtttaacg attcttcgat tcaaaaacga
      901 acaagtaatt acaaaacctg agtacgtcct gcaacagata aaggttaata taatccgact
      961 gcaaaaactg cttttgacaa cgaaatccca acaagatagt agtaactccc cccttcaggg
     1021 gccgggggct tctgtttccg ttctctcgcc ggccaccgtg gccaacatcg tatgcggctt
     1081 cgacatactc ggcttcgcgt tgaatgagcc ttgcgatgaa ttgaaagtag agatcgttga
     1141 tgagcccggt gttcacatta ttaacgatga tgaatatgac ctgccgacag agccagaaag
     1201 aaatgtaagc ggtgcttctt tgctggcctt gcttgacgag acaaaagata tacgggggtt
     1261 tatgctcacc agcaaaaaaa acattaagcc cggaagtggt atcggttcaa gcgcggccag
     1321 tgctgccggt gctgttcttg cagcaaatgt tttacttggg aatcgttata gcaaggagga
     1381 cctggtacgt tttgcgatga acggagaaaa ggttgcgtgt ggcgtaaagc atgccgacaa
     1441 tatagcgccg tgtctttacg gaggcattac actcattcgg tcgatcctgc cactcgacat
     1501 tgttacgttg gacgccccgc ctttgcacgt tacggtggtg catccccaga tcgaagtgcg
     1561 cacttcagac gcgaggcaaa ttttaaaaca acaggtccag cttaaagacg cgatacggca
     1621 atggggaaat attgcagggc ttgttgctgg ttttataaag catgattacg atttgatcag
     1681 ccgctcattg gaagatgtga ttattgaacc gatcagaagc atcttgatac cgggattcga
     1741 tgaagtgaaa aagaatagta aggaggctgg tgctttgggc ggtggaattt cgggttcagg
     1801 tccctccatc tttatgctca gtaaagatgc agaaacggcg aagagtgtgg agagcgcaat
     1861 gaaggaagtt tttgaaaagc ttggcattgc gtatcacaca cacgtaacga cgatcaataa
     1921 agaaggagtg aaggttcttt aaggacgaag agatgggggc taaagcagga aaatgcgcac
     1981 ggcaagtttg catggctgaa gcctttggta aaaacgggtc agaattcaga acttcaatta
     2041 acggagatta agaatagttt ggtatctatc aactcgacct tcgtctcggg actcgatagt
     2101 ggaggtggga tcttagccga agtccattaa gcatatgtca tacgtcaaga tatgggtaca
     2161 tgccgtttgg ggaacgaaga atcgtgtgcc gctgttaaag ccgccggttc tcgagaaggt
     2221 gtgttctcac atcagcgcca acgcaaaaga gaagggaatt tatatcgaca gaattaacgg
     2281 gtacgatgaa catattcaca tactgatgtt gttaaaatct gaatacagca tttcaaagca
     2341 aatgcaactg ctaaagggag aaagtgcata ttgggcgaac aaaactcaat tgctcaaaaa
     2401 taaattggag tgggctgata aattttttgc tgcatcggtt agtgatcggc aagttgattc
     2461 cgtaagggcc tacatagata atcaacaact tcatcaccag aaactgactt ttgcggaaga
     2521 gtataaacat ttcctggaaa gtctcggata tagcgaagag gactttggct aaagccagct
     2581 ttcgcctgtt ggctgtcgtt cccagggcta aagccctggg ttaattgtag tccttggccg
     2641 gctcagcagt aatgaagcga aggacccatt cttcgaagag ttttatttaa gtgctggttt
     2701 gaatcattca ggcgcatgca gctctctaac ccaagacttc agtcttggga aggaatgcga
     2761 atcagaacgt agatcggctt tagccgaagt gattttggga agccaataaa gaaataattt
     2821 tagtttacat catgcattat tacagtctga acgatccgtc acacaaagtg aatttttccg
     2881 aagcggttct tcgtggccag gcgcccgata aaggtttgta cttcccttcc tacattccgg
     2941 aactatcgaa gaattttctt cagcacattt ataatttatc gaaagaagac ctggcattta
     3001 cgataatgaa gccatttgtt ggtgacagta ttccggacga tgtcctgcga cacatcacgg
     3061 cggagacggt gaactttgat tttccgttgg ttaaggtggg ggaaaatatt tatgcactgg
     3121 aattatttca cggcccgaca cttgccttca aagacgtcgg tgcaagattc atgagccgct
     3181 gccttggata tttcaaccgt aattctgata agcacacgac tgttcttgtt gcaacgtcgg
     3241 gggatacagg tggcgcagtt gcaaacggtt ttttgggt
//
LOCUS       DASQJI010000402         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_659868,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000402 DASQJI010000000
VERSION     DASQJI010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659868"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..633)
                     /locus_tag="VEV83_11405"
     CDS             complement(217..633)
                     /locus_tag="VEV83_11405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45769.1"
                     /translation="MTISIADVLTIAGAVIFFGFGIAYFYKSRSPKNHCTTVQKNMEA
                     LSDDNRMMMFALMRGAGGGAIAVAVIITWLQLQYLKTPGQWIPHSILIVSALFFLPAI
                     NGIFLVNRNSRSNRPPILLTLAMALIIAGYFFNIRR"
     gene            complement(658..1110)
                     /locus_tag="VEV83_11410"
     CDS             complement(658..1110)
                     /locus_tag="VEV83_11410"
                     /inference="COORDINATES: protein motif:HMM:NF019238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1569 domain-containing protein"
                     /protein_id="HYK45770.1"
                     /translation="MKTLFDRSTNDEIIERLQTLTPQATNRWGKMNVSQMLGHLDLSF
                     QANFGIIKLNRDLLLSTVFKPVAKRILLGGKPFPKNMPTDKKLLPKQSLDFFDEQKKV
                     LAMIARYATEGPEIICRNPHNILGKISPEQSAFISYKHVDHHLRQFGA"
     gene            1278..>1642
                     /locus_tag="VEV83_11415"
     CDS             1278..>1642
                     /locus_tag="VEV83_11415"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HYK45771.1"
                     /translation="MTTLPSSPRPHQDIERVKGNLFFGSTFEVLKNPVAFLSKLAKNY
                     GPAVTAHFAGKKYYVFQHPDYVKHVWLDNHKNYLKPGATKLLGLFLGEGLSTSNGELW
                     LTHRRLMQPAFHTQRLEGIA"
BASE COUNT          461 a          344 c          364 g          473 t
ORIGIN      
        1 ataaaatgga tgtgagtagg ttgaacagcg gcctttatac attgtctgtt tcagataagg
       61 aagggcacgt aagatccgtg aaatggatca agtgataaaa caatgattca atttggagac
      121 tggtaattat ttttatcagt ctcttttttt tatgagctga aaagattaaa ccaatcaatg
      181 tttgcatttt tgttcactca cgcatgtgtt agcaattcat ctgcgaatat tgaagaaata
      241 ccctgcgatg atcagcgcca ttgccagtgt tagcaagatt ggtggacgat ttgacctgct
      301 gtttcggtta acgagaaata tgccgtttat ggcaggcaaa aaaaacaaag cggatacaat
      361 cagaatcgaa tgcgggatcc actgtccggg cgtttttaaa tactggagct gaagccaggt
      421 gataataacg gcaacagcga tcgctccacc accggcgcca cgcatcagcg caaacatcat
      481 catcctgttg tcatcactaa gcgcttccat gtttttttga accgtagtgc agtgattttt
      541 tggcgaccgc gacttataaa aataagcgat gccaaaaccg aagaagatca ccgcacctgc
      601 gatcgtcaac acatcagcaa tagatattgt cataccacga agtttcaagc gatcatgcta
      661 tgcaccgaac tgccgcaaat gatgatctac atgtttgtat gagatgaaag cagactgttc
      721 agggctgatc tttcctaata tattgtgagg attcctgcaa atgatttctg gcccctcggt
      781 tgcatatctc gcaatcattg ccaacacctt tttttgttcg tcaaagaaat ccagggactg
      841 ctttggcagt agctttttgt cggtaggcat gttcttagga aatggctttc cacccagcag
      901 tattcgtttt gcaacgggtt taaaaacggt gcttaacaac aggtcacgat tcaatttgat
      961 gatcccgaaa ttcgcctgga aggaaaggtc gagatgaccc agcatttggg atacattcat
     1021 tttgccccaa cgattcgtcg cctgcggcgt taacgtttgg agtcgctcaa ttatctcgtc
     1081 gttggttgac ctgtcgaata atgttttcat gtaagaagat tgtgggatta agaaaccatg
     1141 cgaatttgtt ttcgtatttg aacagcgaca ttaaatttaa gaatatttcc aggaattcgg
     1201 aagatcagtt gcgagaaaga tgtgtgctca ggctcatcac aagtttttag gcttaacttc
     1261 atagacattt ttttataatg acgacgctgc catcttcacc gcgaccgcac caggatattg
     1321 aaagggtgaa gggtaatttg ttcttcggca gcacttttga ggtcttaaag aacccggtcg
     1381 cttttttatc gaagcttgca aaaaattacg gcccggccgt gactgcccat tttgccggta
     1441 aaaagtatta cgtttttcaa caccccgatt atgtaaagca cgtttggctt gacaaccata
     1501 aaaattattt gaaacccggc gcaacgaaac tactggggct ttttcttggt gaaggacttt
     1561 caaccagtaa tggcgaacta tggttaacac accgccggct tatgcagccg gcttttcata
     1621 cacaacgtct cgaaggcatt gc
//
LOCUS       DASQJI010000403        10315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_506328,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000403 DASQJI010000000
VERSION     DASQJI010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10315
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506328"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VEV83_11420"
     CDS             complement(<1..673)
                     /locus_tag="VEV83_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45772.1"
                     /translation="MKKIYTSILLSFALGQLCAQWNSNTAQNLLVANKNSSDIQVANT
                     TDGRTWIAFYSLRDGNYDMRAQLLDFHGNRMFGDTGILVSSKKSGSATFVFNVCVDHD
                     NFLVVAFQVQKGSSYECWIQRISTEGHLLWGHGVDLGPGLSPYPAALTTNEIAVAWNN
                     NGKVDFQKLSASGVPAWVPYKEFSGINGAPVSRAQVVASVEGRFSMVYQQQFSAPFYT
                     NLYEQR"
     gene            817..4236
                     /locus_tag="VEV83_11425"
     CDS             817..4236
                     /locus_tag="VEV83_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45773.1"
                     /translation="MATITVLPVAAQLSNLRSKKIPANMAGKIDSLSIVPNTFFIEGY
                     DSSWYTLDWVNAMLTFKRPLPIDSVQIIYRVFPQKLNAVAQRYRYDSIKNNFVAASPV
                     IAARADESFINFGKLNYNGSFGKSISIGNTQDAVFNSQLNLQLSGYIGDSIELNAAIT
                     DNNIPIQPDGTTAQLNEFDNVLLQFKKKTWELNLGDIDLRQDENYFLKFYKRLQGLSY
                     EQRYKVSEHVAGNTLLSGAIAKGKFARNIFEGEEGNQGPYKLQGNNNELFFIVLAGTE
                     KVFLNGVQVQRGEDQDYVINYNTAEILFTPKQMITKDTRIQVEFEYADRNYLNSMLYI
                     NNDFQFGKKVTVNVSAYSNADAKNSPIDQNLDNAQKQFLANLGDSIQDAFYPVANIDT
                     FSINKILYKKIDTVYDGSHDSIYVYSTSLDSARYALNFVFVGVNKGNYVPLFNAVNGN
                     VYQWIQPLNGVAQGSYEPASFLVTPKKQQVVNAGIAWQIDDKTLLRTEFAFSNYDVNT
                     FSSKDKENDKGYASKIDITRTIGWKTKNKTMQLTANADYEWVDKNFQPVERLRPVEFT
                     RDWGLPLLTQAATEHLPSFTLDLKDDKNNDVLYRFSSYIRSDDFTGIRNEILHHQILK
                     GFELTDAFSLTNSTTPADKGFFLRPNVDLHKTFSAFHNYTLGTTYELEHNEQRNDFSD
                     TLTPLSYAFGTFSAYVHSDATKSNHWSFTYFTRGDKLPSGESLVQTDRSHNYNFQGEL
                     YSNKHHQVRVNATYRQLYVYNTQLTSQTPDNSLLGRAEYFVNEWKGFVIGNTLYEIGS
                     GQEQKRSFSYVEVPAGTGLYAWIDYNNDGIQQLNEFELAAFPDQAKFIRIYTPTNEYI
                     KANYTQFNYAVTLNPKVFSKGEKDAPFMKFLTRFVLQSSLQTYKKQQSDGNPTYGPFK
                     GSINDTTLINLNHTFSNTLSYNRYSSVWGIDLTNITSFNKSLLTYGFETLQQKNWNLK
                     CRMNIGRSYTVQLEQRLLKNSLATPSFANRNYDIEGYVATPQLIFTSGTKYRIETYYQ
                     FQQKKNAPEFGGEKAVSNSFNVGAKYNAVSSTSLSAGFQFSNINFSGIPNTSVSYIML
                     EGLLPGQNLLWNLSLTKRLINNLEISIEYEGRKPAETRVINTGRASIRALL"
     gene            4821..5192
                     /locus_tag="VEV83_11430"
     CDS             4821..5192
                     /locus_tag="VEV83_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45774.1"
                     /translation="MKKIFTLVLTLGILSSAFSQSFSTKVVYATPVLSIGFSTHRWVD
                     MYSFTRNERDFQLDKINTEYNQQVRAIMNMRLSVSRKIDLIQELQRERAFKVEKVNDR
                     FMDYRNKYNYNHYDRNFNWIR"
     gene            complement(5241..6530)
                     /locus_tag="VEV83_11435"
     CDS             complement(5241..6530)
                     /locus_tag="VEV83_11435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45775.1"
                     /translation="MQNWRIKLSLFLNYFVFAILLNSVGTVILQVQNNYQVTQGAASV
                     LEAFKDLSIAATSFIVSSYIIRIGYKNSMLIALALVTAACLVMPWLGGFAMTKVLFAA
                     TGVSFALIKVSVYATIGLVTKNKKDHASFMNFIESFFMIGILTGYFIFGAYVDNKHPE
                     STSWLKVYYLLAGISIAAFLLLLSSQLDESAIKNEEPKPLSQDFIQMLQLIVVPVVFI
                     FIFSAFFYVLIEQSIMSWLPTFNSQVLHLSTALSIQMASILAASTALGRFLAGIVLRK
                     IHWLAVLLICLSCAAILVLLAIPLAHNLSTESIQNWGDAPIVAFIFPLIGLLLAPVYP
                     AINSVILSTLPAKKHAPMSGLIVVFSALGGTTGSIITGHIFQAYGGEKAFYFSLIPIA
                     ILIILLFFFNRLQKKYSITQPAPLPVVTDPLVEEYKK"
     gene            complement(6591..7469)
                     /locus_tag="VEV83_11440"
     CDS             complement(6591..7469)
                     /locus_tag="VEV83_11440"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK45776.1"
                     /translation="MKRGNKKIVQLSLYDEFDSKISTYNEGTFPAYKHFLFEIFYVLK
                     GTGEHLVNNEKSEYTPDDLFILTPDAHHQFEVKQETTICIISFNEGFFSPNKSYAKRG
                     VDFSEIFKKLEAIYYHIADHPDAIKFDSERELVRSIIHQLTEENEKKRMFYYSLMQSL
                     MFILLSLIASRVQSDSLRVTTEDTGQLALDVIAYIQYHIYDNKKLSLPALSKTFGKTK
                     DILLRQFRSATGKTIKEFIMDYKLSLVRSRLLFSDMPIVEIANELDFTDESHLNKMFK
                     ARLQITPAKFREMHNK"
     gene            complement(7479..7871)
                     /locus_tag="VEV83_11445"
     CDS             complement(7479..7871)
                     /locus_tag="VEV83_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK45777.1"
                     /translation="MKQNIAHVAIVVNDYDEAIDFYTKKLNFMLVEDTRLSESKRWVI
                     VAPQGSEGCSILLAQAATEQQRTRIGNQTGGRVFLFLHTDSFERDYQQLLNNRVRIVR
                     EPSNEIYGRVAVFADLYGNLWDLIQPAR"
     gene            complement(7880..8713)
                     /locus_tag="VEV83_11450"
     CDS             complement(7880..8713)
                     /locus_tag="VEV83_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HYK45778.1"
                     /translation="MTPAYNRISFLFASIIFLATTICAQSADFKVIAFFTARNDAAHI
                     SFVHEANRWFPEMAAKNDFTYDSTNNWNNLNEEFLSHYQVVIFLDTRPDSLPQRTAFE
                     NYMKHGGAWMGFHFAAFALTPSEFPQNWDWYHNEFLGCGQYKSNTWRPTAAVLRVENK
                     NHPATKDLPETFRSAPSEWYRWQNDLRTNSNIEILLSIDSSSFPLGTGPKPYEIWHSG
                     YYPVVWTNRNYRMIYFNMGHNDMDYENKTNDQLSSTFSSEWQNRLIINALRWLGNGKK
                     N"
     gene            8914..9639
                     /locus_tag="VEV83_11455"
     CDS             8914..9639
                     /locus_tag="VEV83_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45779.1"
                     /translation="MKSLSETWFADGYIDFELKKYTLLAYLQEVNKYFDEHKLYPQLG
                     DVIFHYNNLVAFRENKKFLQEQFPKKLTGIQMERLQVLYEQMMDDDELMEELEQIIQY
                     AAGEMRSTITNGTELYELVEDKLQISPVGIIPLEQNEGYFFLSNTMSQTRVYQFRLSI
                     YEKREEKYRSIRTEFIDVWYRSIANTYEHIKSELLRNRTQLPNPAVYAIQTEMNLPVE
                     ETLLPIAKRSLVRYISNPNPKGS"
     gene            complement(10134..>10315)
                     /locus_tag="VEV83_11460"
     CDS             complement(10134..>10315)
                     /locus_tag="VEV83_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HYK45780.1"
                     /translation="KNHDKYENKVYVLPKYLDEKVARLHLKKIGVELDELSDEQASYL
                     GIAKNGPFKPEHYRY"
BASE COUNT         3099 a         2116 c         2189 g         2911 t
ORIGIN      
        1 atcgttgttc gtataaattc gtatagaatg gcgctgaaaa ttgctgttgg tacaccatac
       61 tgaatctacc ttctacactt gcgacaacct gcgctctcga tacgggggcg ccatttattc
      121 cgctgaattc cttataaggg acccacgcgg gaacgcccga tgcgctcaat ttttgaaagt
      181 ccacttttcc attattattc catgccactg caatttcatt tgtggttagt gcagccgggt
      241 aaggtgacaa accgggacca agatcgacgc catgtcccca aagcaaatga ccttcggtgc
      301 ttatccgctg gatccagcat tcataagacg aacctttttg aacctggaat gcaacgacga
      361 ggaaattatc atgatcaaca caaacattaa aaacaaaagt cgcactgcct gactttttac
      421 tgctcacgag aatgccggta tcgccaaaca tacggttgcc atgaaagtcg agcaattgag
      481 cacgcatgtc ataattcccg tcacgcaggc tatagaatgc gatccacgtt cgaccatcgg
      541 tggtgtttgc aacctggata tcactgctgt ttttattcgc cacgagaagg ttttgtgcgg
      601 tgttgctgtt ccattgtgcg cacaactgtc caagtgcaaa gctcaagaga atgctggtgt
      661 agatcttttt cataatgatc gcttatagtt ttgggaaagt gaatttaatc agaaattata
      721 tgaaaggacg aatttgaatt caaacaataa atttacctga taattgttta tcttaaaact
      781 attgcattgc ggggagtgag gctgatattt tttttaatgg caaccataac tgtcttgccc
      841 gttgcagcgc aactttcaaa cctgcgcagt aaaaaaatac ctgcgaatat ggcgggtaaa
      901 attgattcgt tgagcattgt accaaatact ttttttattg aaggatatga ctcgtcgtgg
      961 tacactctcg attgggtaaa cgcgatgctt acttttaaga ggcctcttcc aattgatagc
     1021 gttcagataa tctaccgtgt atttccgcaa aaacttaatg ccgtagctca acggtataga
     1081 tacgacagta taaaaaacaa ttttgttgct gcttcacctg tcattgctgc aagagccgat
     1141 gagtcgttca tcaatttcgg caaactgaac tacaacggca gttttgggaa aagcatcagt
     1201 attggaaata cacaggatgc cgtattcaat tctcaactta atcttcagtt aagtggttac
     1261 attggcgaca gtatcgaact aaatgcggca atcacagata ataatatccc gatccagcct
     1321 gacggcacaa ccgcacagtt gaacgaattc gacaatgtgc ttcttcaatt taaaaaaaag
     1381 acgtgggaat tgaacctggg cgatatagat ctgcggcagg atgaaaatta ttttctcaaa
     1441 ttttataagc gcctgcaggg attgtcgtat gagcagcggt ataaagtatc tgagcatgtc
     1501 gccggtaaca ccttgttatc gggtgctatt gcaaaaggca aattcgcaag aaacattttt
     1561 gaaggggagg aagggaacca gggtccttat aagttgcagg gcaataacaa cgagttattt
     1621 tttatcgtgc ttgccggcac cgaaaaggtt tttctaaatg gcgtgcaggt gcagcgtggc
     1681 gaagaccagg attatgtgat caactataat actgccgaaa ttcttttcac accaaaacaa
     1741 atgatcacga aagacacgcg catacaggtt gagttcgagt atgcggatcg caattattta
     1801 aactcgatgt tatacatcaa caacgatttt caatttggaa aaaaagtgac ggttaatgtt
     1861 tctgcttaca gcaatgccga tgcaaaaaat tcacccatag atcaaaattt ggataacgcg
     1921 caaaaacaat ttctcgccaa cctcggcgat agtatccagg acgcatttta cccagttgct
     1981 aatatcgata cgttttcaat aaataagatc ctgtataaaa agatcgatac ggtgtacgat
     2041 ggtagccacg attctatcta tgtctattcg accagcctgg atagtgcgcg gtatgccctg
     2101 aattttgttt ttgtaggtgt gaataaagga aattatgtcc cgctgtttaa tgcagtaaat
     2161 ggtaacgttt atcaatggat ccagccactg aacggagttg cgcagggtag ctatgagcca
     2221 gcgtcttttt tagtgacgcc aaaaaagcag caggttgtta atgcaggtat cgcatggcag
     2281 atagatgata agaccttgct tcgaacggaa tttgctttta gcaattatga tgtaaacact
     2341 ttttcatcaa aggataagga aaacgacaaa ggctatgcat caaagatcga catcacgagg
     2401 acaatcgggt ggaagacaaa aaacaagacg atgcaactaa cggcgaatgc ggactatgaa
     2461 tgggtagata aaaattttca acctgtcgaa cgattgcggc ccgtcgagtt tacgagagac
     2521 tggggactac cgctgctaac ccaggcggca acagaacatc ttccttcatt tacgctggac
     2581 ctgaaagatg acaaaaataa cgatgtgctc tatcgttttt ccagttacat caggagcgat
     2641 gactttaccg ggatacgaaa cgaaatactg catcaccaaa tattaaaagg atttgaattg
     2701 actgacgcgt ttagtcttac aaacagcaca actccggctg ataaaggttt ttttcttcgt
     2761 ccaaacgtcg atctgcataa aacgttttct gcttttcaca attacacact cggcacgact
     2821 tacgaactcg aacacaatga gcaacgaaat gatttttcag acacccttac gccgttgagc
     2881 tatgcatttg gaactttttc cgcttacgtg cattcggatg caacgaagag taatcattgg
     2941 tcgtttactt atttcacgag aggagataaa cttccgtcgg gtgaatcatt ggtgcaaaca
     3001 gacagaagtc ataattataa cttccagggt gaactatata gcaacaagca ccatcaggtt
     3061 cgcgtcaatg caacataccg gcaattgtat gtgtacaaca cacagctcac gtcccaaacg
     3121 cctgacaata gcttgctcgg gcgtgctgaa tattttgtga atgagtggaa aggttttgtg
     3181 attggaaata cgttgtatga aattggaagc gggcaggaac aaaaaagaag tttttcatat
     3241 gttgaagtac cagcgggcac aggattgtat gcctggatcg attacaacaa cgatggcatt
     3301 cagcagttga atgaatttga acttgccgct tttccagacc aggcgaagtt cattcgaata
     3361 tatacgccga cgaatgaata cattaaagca aactatacgc aattcaatta tgcggtgaca
     3421 ttaaatccga aagtattttc gaaaggagag aaggatgcac cctttatgaa atttctgacc
     3481 cggtttgttt tgcaatcttc tctgcaaacg tataagaaac agcaatcaga cggcaaccca
     3541 acgtatggac ctttcaaagg gagtataaat gatacaacgc tcataaacct taatcatact
     3601 ttcagtaata ctttatctta taaccgatac agcagcgttt ggggcattga cctgacgaat
     3661 atcacttcgt tcaacaagtc attgctcacg tatggttttg aaacgttgca gcaaaagaat
     3721 tggaacctga aatgcaggat gaacattgga agaagttata cggtgcaatt ggaacagcgg
     3781 cttttaaaaa acagtttggc tacgccgtca tttgcgaacc gtaattatga tattgaaggc
     3841 tacgtcgcta cgccgcaatt aatttttaca tcaggaacaa aataccgcat tgaaacttat
     3901 taccagtttc aacagaaaaa aaatgcgccg gagttcggcg gagaaaaagc ggtttccaat
     3961 tcgtttaatg ttggggcaaa atataatgcc gtatcaagca caagcctctc ggctggattc
     4021 cagttcagca atatcaattt ctccggcatt ccaaatacat cagtcagtta catcatgctt
     4081 gagggtttat taccggggca gaacttgttg tggaatctga gtcttacaaa acgcctcata
     4141 aacaatctcg aaataagtat cgaatacgaa ggccgcaaac ctgcagaaac gcgtgtgatc
     4201 aataccggcc gcgcaagcat cagggccttg ttgtgatggt gaattgtgag ttgtgaattg
     4261 tgaatgagct tatcaatttc tgagtagcca aattaaccgc gcagcctctt cacacatcgg
     4321 aatgaataat cagtgatgag tgcgttgtga attgtgaatt gtgaacggcc aatggctgtt
     4381 tcgtttgtaa agttttccca atcactcagc gctactagtc tcagatggtc aatgttgaat
     4441 cgtcaatcct caatcatcct gattttgttt ttctgttctg aaacacgttg aatgaaaaat
     4501 gagaaagccc caagggcttg actgttaata accctggatg gaatccgggg ataatcgata
     4561 cgaatgccag caaccctgga ggggttgaat aagtgtggtg ataaggtact ttttcatgac
     4621 gaggcaaatc gtgaatcgtc aatcagcaat ctgtaatctg caatcgccaa tctgcaatcg
     4681 gcaatctgaa atctgaagtc tgcgatctgg aaatctgcaa tcgccaatct gcaatcatca
     4741 ttaacaatcc cttgataaac gaaaaagaaa caataccatc tcatatacat tgatttatta
     4801 aacaataaaa aacaaacaaa atgaaaaaaa tctttacact tgtattaacc ctcggcattt
     4861 taagttctgc gttttcgcag tcattttcta caaaggttgt ctatgcaact cctgttttaa
     4921 gcatcggctt ttctacgcat cgctgggttg acatgtattc tttcacaaga aatgaaagag
     4981 actttcaact agacaagatc aacacggaat acaaccagca ggtaagagcg atcatgaaca
     5041 tgcggttgag cgtttcaaga aaaattgatc tgatccagga attgcaaagg gaaagagcgt
     5101 tcaaagttga aaaggtgaat gatcgtttta tggattacag gaacaaatac aactacaatc
     5161 actacgacag gaacttcaac tggattcggt aattcttagc atggcatagt ttatataaag
     5221 cttcgcattt tcgcggagct ttatttttta tattcttcaa ccaaaggatc tgtgaccacg
     5281 ggcaatggag ctggttgggt gattgaatat ttcttttgta aacggttaaa gaagaaaagc
     5341 aggatgatca aaatagctat tgggatcaat gaaaaataaa aagccttctc gccgccataa
     5401 gcctggaaaa tgtggccggt gattatagag cctgttgttc cgcctaaagc agagaacaca
     5461 acgatcagtc cgctcatcgg tgcatgtttt tttgcgggta gtgtgcttag gatgacagaa
     5521 ttaatagcgg ggtaaacagg agcgagcaat agtcctatca acggaaagat aaatgcaacg
     5581 atcggtgcat cgccccagtt ttgaatagac tcagtgctca aattgtgcgc caatggaatt
     5641 gcaagcaaaa cgagtattgc agcgcacgac aggcagataa gcaaaactgc aagccaatga
     5701 attttgcgca gtacaatacc agcaagaaag cgaccaagcg ctgtcgatgc cgcaagtatg
     5761 ctggccatct gaatgcttag tgcagtggaa agatgtaata cctggctgtt gaacgttggc
     5821 agccagctca taatactttg ctctatcagt acataaaaaa atgcgctgaa aataaatata
     5881 aacacaacag gcacgacgat cagttgcagc atttgtataa aatcctgcga caacggcttg
     5941 ggctcttcat tttttattgc cgattcgtca agctgagaac tcagtaataa taaaaatgca
     6001 gcgattgaaa tgccggcaag caggtaatac actttcagcc atgacgttga ttcgggatgt
     6061 ttattatcta cataggcgcc gaaaataaag tatccggtta gtatgccgat cataaaaaag
     6121 ctttcaatga aattcatgaa gctggcatgg tctttcttgt ttttggtgac aagcccgatg
     6181 gttgcatata ctgaaacttt tattaaagcg aagcttacgc cggtcgccgc aaacaaaact
     6241 tttgtcatcg caaagccccc aagccatggc attaccaagc atgcggcagt tacaagtgct
     6301 aatgcgatca gcattgaatt tttataacca atgcggatta tgtaagagga gacaataaaa
     6361 gaagtggcgg caatgctcag gtccttgaac gcttccagta cacttgctgc gccctgtgta
     6421 acctgataat tattttgcac ctgcaagatg accgtgccaa cgctgttcaa taaaatggcg
     6481 aagacaaaat aattcaggaa aagggaaagt ttgatcctcc aattttgcat agcaatcgtt
     6541 ttgtattcag ctatgaaaat acatatttcc ttttatgcag attacggaag ttatttgtta
     6601 tgcatctccc taaactttgc aggcgttatt tgcaacctgg ccttaaacat cttgtttaaa
     6661 tggctttcat ccgtaaagtc cagctcgttt gcgatctcaa caattggcat atcactgaat
     6721 aaaagccttg atctcacaag gcttaattta taatccataa tgaattcctt gatcgttttc
     6781 ccggttgctg atctgaattg acggagaagt atgtcttttg tctttccaaa agtttttgac
     6841 aaagctggga gtgacaattt cttgttgtca taaatatgat attggatata agcgatcacg
     6901 tcaagggcta actgaccggt atcctctgtc gttacgcgta agctgtcaga ctgcactctg
     6961 ctcgcaatca ggctgagtaa aatgaacata agactttgca taagcgagta atagaacatc
     7021 cgcttctttt cattctcttc ggtcaattga tgaattatcg atctcaccaa ctcacgctcg
     7081 ctgtcgaact ttattgcgtc cgggtggtcg gcgatatgat aatagatcgc ttcgagcttt
     7141 ttgaaaattt cgctgaaatc aactccgcgt tttgcgtatg acttgtttgg cgaaaaaaaa
     7201 ccctcgttaa agctgataat gcaaatagtt gtttcctgct ttacttcaaa ctggtgatgc
     7261 gcgtcgggcg tcaaaataaa aagatcgtcg ggcgtatatt cagacttctc attattcacc
     7321 aggtgttccc cggttccttt aagcacataa aatatttcaa acaggaaatg tttataagcc
     7381 gggaacgtgc cttcattgta tgttgaaatt ttgctgtcga attcatcata cagggacaac
     7441 tgcactattt ttttatttcc tcgtttcatt agctgatatt atctcgcagg ctgtataagg
     7501 tcccaaagat tgccgtatag atctgcaaat acggcaacgc gtccataaat ttcatttgat
     7561 ggttcgcgaa cgatccgaac tctattatta agcagctgct ggtagtctct ttcaaagctg
     7621 tcggtgtgta agaacaggaa aacgcggcct cctgtttgat ttcctatccg tgtccgctgt
     7681 tgttccgtag cagcttgggc taataatatt gaacatcctt cggatccctg tggcgccacg
     7741 ataacccaac gcttgctttc actcagcctg gtatcctcaa cgagcatgaa attcaatttc
     7801 tttgtgtaga agtcaatcgc ctcatcgtag tcattaacga caatggcaac atgagcgata
     7861 ttttgtttca tgactgttct caatttttct tgccgttgcc taaccatcgc agcgcattaa
     7921 tgatcagccg gttttgccac tcgctgctaa aagtggatga aagctggtcg tttgttttgt
     7981 tttcgtagtc catatcatta tgtcccatgt taaaatatat catccggtaa tttctattcg
     8041 tccaaaccac cgggtagtag ccactgtgcc agatctcgta aggctttggc cctgttccaa
     8101 gcggaaagct cgatgagtcg atcgataaaa gaatctcgat atttgaattc gttcgcagat
     8161 cattttgcca ccgataccat tcactcggtg ccgatctgaa agtttccggt aaatcttttg
     8221 tggctggatg gtttttattt tcaacacgca atacggctgc tgtgggccgc catgtgttgc
     8281 tcttatattg accgcatcct aaaaattcgt tgtgatacca atcccagttc tgtggaaatt
     8341 cggatggtgt aagcgcaaat gctgcaaagt gaaaacccat ccatgcaccg ccgtgtttca
     8401 tgtagttttc gaatgcggta cgttgaggca aagaatcggg cctcgtatct aaaaagatga
     8461 caacctggta atgtgaaaga aactcttcgt ttaaattatt ccagttgttc gtcgaatcat
     8521 acgtgaaatc gttttttgca gccatctccg gaaaccatct gttcgcttca tgaacaaaac
     8581 ttatatgcgc ggcatcattc cttgctgtaa aaaatgcgat cactttgaaa tcggcggatt
     8641 gggcgcatat agtggttgcc aaaaaaatta tagaagcaaa aaggaatgat atcctgttat
     8701 acgcaggtgt catgcaactc atgttggaaa gataataaaa cgcagagctt ttgaacgttt
     8761 ttcggcacgc tatcacgcaa gcatatttgg caaacagcgc aatccacgag gcactaacat
     8821 taaactttat caacagcaat gcatcttaat gtgaacattg gtctttcatt tgtttttaaa
     8881 tatattgtaa tttgactttt aaatcggcat cgcatgaaat cgttatcgga aacatggttc
     8941 gctgacgggt atatcgactt cgaattaaaa aagtatactt tgctcgctta cctgcaggaa
     9001 gtaaacaaat attttgacga acacaagttg tatcctcagc tcggcgacgt gatatttcat
     9061 tacaacaacc tggttgcgtt cagagaaaat aaaaaatttt tgcaggaaca atttccgaaa
     9121 aaacttaccg gcatacaaat ggaaagactg caggttttgt atgagcagat gatggacgac
     9181 gacgaactaa tggaagaact ggagcagatc atccaatatg ccgccggcga aatgcgatca
     9241 acgatcacaa atggcaccga attgtatgaa cttgtggagg acaagctaca gatatcaccg
     9301 gtcggcatta ttccactcga gcaaaacgaa ggctactttt ttctcagcaa tacgatgtcg
     9361 cagacaaggg tatatcaatt ccggctaagt atttatgaga agcgcgagga aaaataccga
     9421 agcatccgca cggagttcat tgacgtatgg tatcggagca tcgctaatac atacgagcat
     9481 atcaaaagcg agctgctccg gaaccgcacg caactgccaa atcctgccgt ttatgcgatc
     9541 caaactgaaa tgaatttacc cgttgaagaa acgcttcttc caatagcgaa gagaagtttg
     9601 gtgagataca tctctaaccc caaccctaaa gggagttagg aacgggtttc aaaatttgag
     9661 cgtttcaatg tttcaacgtt cacaggccct tgcatcgtga atatctcaaa tggatcaata
     9721 tcaagagatg tctcactggc gttcgacatg acgtctattt caggtggttc aaaaaaaact
     9781 tctggagttg tttgattttt gttttgtaaa tattgataaa gcgcaccgtc atttcgatga
     9841 agcagacatc tctgaatttg caaaattgat cggtttcaag agatgtctca ctggcgttcg
     9901 acatgacgtc tatttcacgt ggttcaaaaa aaacttctgc agttgtttga tttttgtttt
     9961 gtaaatgttg ataaagcgca ccgtcatttc gacgaaggag aaatctccga attttcaaaa
    10021 ttggttggtc tcactggtgg ctcgacatgg tttttttcgt aaaaaaaaag gctttcggaa
    10081 agaaagccta tatgttcgct cacgctaaat cccaattcct aaattcctaa ttcttaatac
    10141 ctgtaatgct ccggtttgaa gggaccgttc tttgcgatac ccaaataaga agcctgctcg
    10201 tcacttaatt catccagttc cacgccgatc ttttttaagt gaagacgtgc aaccttttcg
    10261 tcgaggtatt tggggagaac atacactttg ttttcatatt tgtcatggtt cttcc
//
LOCUS       DASQJI010000404         6516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_200222,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000404 DASQJI010000000
VERSION     DASQJI010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6516
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200222"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..1835)
                     /locus_tag="VEV83_11465"
     CDS             complement(270..1835)
                     /locus_tag="VEV83_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45781.1"
                     /translation="MRSSVIVIFILPFLLFLSCSANTQKIYYSKTEGNFLFTYSHTIG
                     QVKDHIIIWKYQSEKSERSEVIIYDDKMNVLNRVKTDILNVNHISSIDFINLGQSFAV
                     VYQYSTKTKWFCKIASFDENGNCVKRQTIDSSSLAGAQYGNNPYKIIVSPNSKRFVLA
                     RISVPRADLVSLDFQLLDYVATRIQRSSILLPRHEVNLNEAILDTTSHLLVPMLKSVE
                     RNSIIIYKIDLTTDSLASVACEIKNGSLASNTIGIGQRAGEYIVNAQWKSGAGDKATN
                     ESGLFFWRFGINLSHIADTIFKGIQLPREFFNDEIYFKSSVIADDDGFYIISAPSYMA
                     SLSNYITKRAATNSDSMFFYGNAAAMPTPDGVAIPNNLDPADKVPVLRPESRSHMRGN
                     TVVVENFHFINAAHLRLHVIKIDNANKLVWTKYLDGANEKTLTRFVNLSHIIKSKGTF
                     SLLYAVSGEKGKEILEKTEFLPDGNYSSSLVFSMKLNYSLIFQKGVEINSSVIVFPCM
                     IHNKLAFARVEME"
     gene            complement(1893..2366)
                     /locus_tag="VEV83_11470"
     CDS             complement(1893..2366)
                     /locus_tag="VEV83_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK45782.1"
                     /translation="MNDSSQIAKHVRDVHFGGNWTGVNLTDALADINWEEATKKIYSL
                     NTIAALVFHMNYYVDAVLNVLHGKPLTASDKYSFDAPPIQSEDDWKTLTDKTWRQASE
                     LADLIDKLPDTKLTETFVDEKYGTYYRNLHGIVEHIHYHLGQIVLIKKLLRHTDQ"
     gene            complement(2403..2834)
                     /locus_tag="VEV83_11475"
     CDS             complement(2403..2834)
                     /locus_tag="VEV83_11475"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK45783.1"
                     /translation="MLRSVRDEIVEVVNKLFVFTDNQNWDGLRMEVFTNQVEFDMSSL
                     GGVKATLTSAEICEMWEIGFIGVDHINHLAGNYIIHIDDNTANVLAYATATHYKESAT
                     LGKTREFVGTYDIGLINEGSDWRIWQFKYNLKFITGNADLI"
     gene            complement(2904..3551)
                     /locus_tag="VEV83_11480"
     CDS             complement(2904..3551)
                     /locus_tag="VEV83_11480"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYK45784.1"
                     /translation="MTQNDIIDCYNKTAKNYAEKYLNELSQKHLDQVLLKSFAAENAS
                     RGKMIDLGCGPGQTTKFLSDCGVQNIIGTDISPEMINVAISVNPQLSFEIADMLCLKY
                     PDRYFGSAIAFYSIVHFTYEQLPLAFNEIKRVLANNGEFLFCFHIGNELVHLDNFLDK
                     PVNIEFHFFEVNKITTLIKEAGFEIIDTIERQPYPNVEYPSKRAYIWVKKLGDSN"
     gene            complement(3629..5002)
                     /locus_tag="VEV83_11485"
     CDS             complement(3629..5002)
                     /locus_tag="VEV83_11485"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HYK45785.1"
                     /translation="MQAWTDYQQKNKERFLEELLELLRIPSVSARSEHKDDMLRCAEA
                     VQQKLLEAGADKAEVYKTEGHPVVYGEKIIDPSKPTVLVYGHYDVQPPDPLELWHSGP
                     FDPVIKDGKIFARGACDDKGQVFMHVKALETLTRTNTLPLNIKFIIEGEEEVGSPNLA
                     TFVKQNKDLLKADVILISDTSMLSLQTPSMDVGVRGLSYIEVEVTGPNRDLHSGTYGG
                     AVANPIVVLCNMIASLHDHNNHITIPGFYDDVVVATEEERKLMAEAPFDEAEYKEDLG
                     VKELWGEKGYSTNERTGIRPTLEVNGIWGGYSGEGAKTVLPSKAHAKISCRLVPNQKS
                     DTITTILINHIKSIAPPYVDVQVMIHHGGEPYMTPIDSKGFKAASKAIETTFGKHPIP
                     VRGGGSIPICSLFEQELAIKIIFMGFGLDSDNLHSPNEKFNLENYYKGIETIPYFHKY
                     FAEMFDV"
     gene            complement(5244..5636)
                     /locus_tag="VEV83_11490"
     CDS             complement(5244..5636)
                     /locus_tag="VEV83_11490"
                     /inference="COORDINATES: protein motif:HMM:NF042904.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6799 domain-containing protein"
                     /protein_id="HYK45786.1"
                     /translation="MKKTSLLTSVLVLLFACNPKNSSSDNSYVDSSSMTEDSGMTMPD
                     SSMMGDTSAMSMHMPMQMCVIMKDDKMMVMDSGKTMPMEKDVTMDDGTKVMKDGHYMK
                     PGGTKTTMKNGDCIMKDGSVTTVDKMKM"
     gene            complement(5731..>6516)
                     /locus_tag="VEV83_11495"
     CDS             complement(5731..>6516)
                     /locus_tag="VEV83_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45787.1"
                     /translation="VFGFHRAMDTVGAVLGPAFALMYLYYHPKNYATLFYLAFIPGVL
                     ALLASFLLKEKKHDASIEKKSTSFFSFLHYWKESPANYRKLVTGLLLFTLFNSSDVFL
                     LLKAKESGLNDTLVIAIYIFYNLVYALAALPAGILADKMGLKKIFVAGLVLFAVVYFG
                     MAKADNVYTFATLFFVYGIYAAATEGVSKAWISNITDRKDTATAIGTYTGFQSICTML
                     ASSLAGLIWSQFGASATFIVTASACIVVIFYITFVIPAPTIHE"
BASE COUNT         1727 a         1427 c         1400 g         1962 t
ORIGIN      
        1 ggaagggacg gagtcctttt tcatacatga agcgaaactt aaacacagca ggaaacttgc
       61 aggtatcaac ctgtacattt ggcatttcat ggtttacagt tttgaagtgt agataaaagc
      121 ggagagctag gccatactca tgatttttta gtgttgggat aagcagggca aattttagta
      181 acgcatgccc aagacttata gggtaaattt tggtttaacg cgtagagaat attttcgcgt
      241 taaatatttt taacgttcat gtaggccaat cactccattt caactctcgc aaaagcaagc
      301 ttattgtgga tcatgcaggg aaagacaatt actgaggaat taatttcaac gcctttctga
      361 aatatgagac tgtaatttaa tttcattgaa aacaccaggc tgctgctgta gtttccgtct
      421 ggcaaaaatt ccgtcttctc aagaatttct tttccttttt cgccggatac ggcatagagc
      481 aaactaaatg tgcccttgct ttttattata tgagagaggt tcacaaaacg ggtcagcgtt
      541 ttttcgtttg ccccatccag gtatttcgtc catacgagct tgttcgcatt gtcaatcttt
      601 atcacgtgca accgaagatg agccgcgttg atgaagtgga aattttccac aacgacggtg
      661 ttgccacgca tatgcgaccg gctttcaggc ctaaggaccg gcaccttatc ggccgggtcg
      721 agattgtttg gaatagccac accgtcggga gtgggcatgg ctgcagcgtt accataaaaa
      781 aacatggaat cggaattagt ggctgcacgc tttgttatgt agtttgacaa tgatgccata
      841 taacttggcg cagatatgat ataaaagcca tcatcatcgg cgataaccga acttttgaaa
      901 tagatctcat cattgaagaa ttcacgcggc agctgtatgc ctttgaagat ggtatcggca
      961 atgtgtgaca agttaatgcc gaagcgccaa aaaaatagtc cgctttcatt tgttgccttg
     1021 tcccccgcgc cagatttcca ctgagcattt acaatatact cgcccgccct ttgaccgatt
     1081 ccaatggtgt tgcttgcaag tgacccattc tttatttcac aggcaacgct tgcaaggctg
     1141 tcggtagtga gatcaatctt gtaaataata atgctgttcc tttctacact tttaagcatg
     1201 ggcacaagca ggtgggaggt cgtatccaaa attgcttcat taagattcac ttcatgacgc
     1261 ggcaataaga tcgaactgcg ctgaattcgc gtagcgacat agtctaacaa ttggaagtca
     1321 agacttacaa gatccgccct cggcacagag attcttgcta agacaaatct ttttgaattc
     1381 ggtgaaacaa ttattttgta tgggttgttt ccatactgcg ccccggcgag tgaactgctg
     1441 tcgatcgttt gtcttttaac gcaatttccg ttttcgtcaa aagacgcaat cttgcagaac
     1501 cacttcgttt ttgtactata ttgataaacg acggcaaaag actgacccag gtttataaaa
     1561 tctattgaag agatgtggtt aacgtttaag atgtccgtct ttacgcggtt caatacattc
     1621 atcttgtcgt cgtatatgat cacttccgat cgttcgcttt tttctgattg atatttccaa
     1681 ataatgatgt ggtcctttac ctggccgatc gtatgcgagt atgtgaacag aaaatttcct
     1741 tccgtcttgg aataatatat tttctgcgtg ttagcggagc atgataaaaa caaaaggaaa
     1801 ggaagaatga aaatgacgat cacacttgat ctcatgatac gaagttacgg gtgatggcca
     1861 tcagcattgc ggatcagtgg ttgaatattc aatcattggt ctgtgtgtcg caataatttt
     1921 tttattagca cgatttgtcc caaatgataa tggatgtgtt cgacgattcc atgcaggttg
     1981 cggtagtacg ttccatattt ttcatcaacg aatgtttcgg tgagtttggt gtcaggcaat
     2041 ttatcgatga ggtccgccaa ttcgctggct tgtctccatg ttttgtccgt caacgttttc
     2101 caatcatctt ccgattgtat cggcggagcg tcaaaactgt atttgtcgct ggcagtaagt
     2161 ggttttccat gcaacacatt taaaactgcg tctacataat agttcatgtg aaatacaagc
     2221 gctgcaattg tattgagcga ataaatcttt tttgtagctt cttcccagtt aatgtctgca
     2281 agcgcatccg ttaaattcac gccagtccag ttaccgccaa aatgaacatc tcttacatgc
     2341 tttgcgattt gcgacgagtc attcatactt tgtgatttac tgtgcgctgc ggggcgatta
     2401 tttcaaatga ggtcagcatt gccggttatg aatttcaggt tgtatttgaa ttgccagata
     2461 cgccagtctg atccttcgtt tatcagcccg atgtcatatg ttccgacaaa ttccctggtt
     2521 ttcccgagcg ttgcagattc tttgtagtgc gttgccgttg cataggccaa aacatttgca
     2581 gtattgtcgt cgatgtgaat gatgtaatta ccagccaggt gattaatatg gtcaacgcct
     2641 atgaaaccga tttcccacat ttcgcagatc tccgctgatg taagcgtcgc ttttacaccg
     2701 ccgagggatg acatgtcaaa ctccacctgg ttggtaaaaa cttccattcg tagtccatcc
     2761 cagttttgat tgtcagtgaa gacaaacagt ttatttacca cttcaactat ttcgtctctt
     2821 acagatctta gcatggcgac atcaaatgtt tttttcaagt gtaaaaatag caacgtgtga
     2881 ttaaaatgcg atgatcatcg gattcagttt gaatcaccga gtttcttaac ccagatatac
     2941 gcacgtttgc tgggatattc aacgtttgga tatggctgcc gttcaatggt atctatgatc
     3001 tcaaaacctg cttctttgat caaagttgtg atcttgttta cttcaaaaaa atgaaactca
     3061 atgttcacag gcttatcaag aaagttgtcg aggtgaacaa gctcattgcc gatatgaaaa
     3121 caaaaaagga actcaccgtt attcgccagt actcttttta tttcgttgaa tgcgagcggg
     3181 agttgctcgt aagtaaaatg cacgatcgaa taaaaagcaa ttgcagatcc aaaatagcga
     3241 tcgggatact ttaagcacaa catgtctgca atttcgaaag agagctgcgg gttaacggat
     3301 attgcaacgt tgatcatctc cggagaaata tcggttccga tgatattttg gacaccgcaa
     3361 tcagacaaaa attttgtcgt ttgcccgggg ccgcaaccta agtcgatcat tttgccacga
     3421 cttgcatttt cagccgcgaa cgatttcagc aagacctggt cgagatgttt ctggcttaat
     3481 tcattcagat atttttccgc ataatttttt gccgtcttgt tgtaacaatc aattatgtca
     3541 ttttgtgtca ttgacgcctc attagatgag ctggaattcg aaaacatcga accgtaagcc
     3601 gcgttggttt aacgtcaaac ttcaaacgtc aaacgtcaaa catttcagca aaatacttat
     3661 ggaagtatgg gatcgtttca atgcccttgt aataattttc aagattgaat ttttcattcg
     3721 ggctgtgaag attatcgcta tcgaggccaa atcccatgaa aataattttt atagcgagct
     3781 cctgctcaaa caatgagcaa attggaatgc tgccgccgcc gcggactgga atcggatgtt
     3841 tgccgaaagt tgtttcaatt gcttttgatg ctgccttaaa gcctttgctg tcgatcggcg
     3901 tcatataagg ctcgccgcca tggtggatca ttacttgcac atctacatat ggcggtgcaa
     3961 tactttttat gtggttaatt agaatggtag tgatggtatc agacttttga ttcggcacga
     4021 gacgacaact gatctttgca tgcgctttag acggcaacac ggtcttagca ccttcaccgc
     4081 tataaccacc ccagatgccg ttcacttcaa gcgtcgggcg aatgcccgtt ctttcgtttg
     4141 ttgaataacc tttttcgccc caaagttctt tcacaccaag atcttctttg tattccgcct
     4201 catcgaatgg cgcctcggcc attaatttcc tttcttcttc cgttgcaaca actacatcgt
     4261 cataaaagcc ggggatcgtg atatgattgt tgtgatcgtg cagacttgcg atcatattac
     4321 ataaaacgac gatcgggttt gcaacagctc cgccgtatgt gccgctgtgc aagtcacggt
     4381 tagggccggt tacttccact tcaatataac taaggccgcg cacaccaacg tccatcgaag
     4441 gtgtttgcag gctaagcatc gaggtgtcgc tgataaggat cacatcggct ttcagcaagt
     4501 ccttattttg ttttacaaat gtggcaaggt ttggacttcc tacttcttct tcgccttcaa
     4561 tgatgaattt tatattcagc ggaagcgtgt tcgtacgcgt taatgtttcc agcgccttca
     4621 cgtgcataaa cacctgcccc ttatcgtcac atgctccgcg tgcaaaaatt tttccgtctt
     4681 tgatcacagg atcgaatggg ccgctgtgcc acagctcgag gggatcgggc ggctgaacat
     4741 cataatgacc gtaaaccagg acagtgggct tagaagggtc gatgattttt tccccgtaaa
     4801 cgaccgggtg tccttcggtc ttgtatactt cggctttgtc agcgcctgcc tccaataatt
     4861 tttgctgcac tgcctctgca caacgcagca tatcgtcctt atgttcgctg cgtgcactca
     4921 cacttggaat gcgtaatagt tcaagtagct cttcgagaaa acgttcttta ttcttttgct
     4981 ggtaatctgt ccatgcttgc atgacggtct caatttattt aagcaggcga aggtataagt
     5041 tttgtttcaa gttcgtggtt tgatgtttga agtttcctta gcgattcgcg cgctttgcct
     5101 tcgatggctc gtggtaaaaa gagaatactc aatactaaaa tgaagacgcc aggaatcgct
     5161 tacatgcaaa ttatttctac acgtataaaa agcatggccg gcccgccttt taaaaacact
     5221 gctccagcag cgaaacacct cgcttacatc ttcattttgt ccaccgttgt tacagacccg
     5281 tctttcatga tgcaatctcc attcttcatc gtcgtctttg taccaccggg cttcatgtaa
     5341 tggccatcct tcataacttt tgtgccatcg tccatggtta catctttttc catcggcatt
     5401 gtcttgccgc tgtccattac catcattttg tcgtctttca tgataacaca catttgcatc
     5461 ggcatgtgca tactcattgc cgaagtatca cccatcattg agctgtcagg catcgtcatg
     5521 cccgagtctt cggtcattga tgaactatcc acgtaggaat tatcgctgct gctgtttttt
     5581 ggattgcatg cgaaaagtaa aaccagcaca ctcgttagga gggatgtttt tttcatatgt
     5641 tttttgtttg cggtgaggaa ttttttgcgc ctgtagcttt gccgaaagaa ttgtgccagc
     5701 ttgaaatttc acggatggac cgtggaaagt ttattcatga atcgtgggcg ccggaattac
     5761 aaacgttatg tagaatatga caacaatgca cgcgcttgcc gtcacgataa atgtggccga
     5821 agcgccaaac tgcgaccaga tcaacccggc cagcgagctt gccagcatcg tgcaaatgct
     5881 ttgaaatcct gtgtacgttc cgatagctgt agccgtgtcc ttacgatcag tgatattact
     5941 gatccacgct tttgaaacac cttcggtggc ggcggcataa attccataca caaaaaaaag
     6001 cgtcgcaaac gtgtatacgt tgtctgcttt agccatacca aagtaaacga cagcaaacaa
     6061 gacgaggccg gcaacaaaaa tttttttcag acccatcttg tcagcgagga tgccggcagg
     6121 caaagctgca agcgcataca cgagattgta aaaaatatag atcgctataa ccaacgtatc
     6181 attcaatcca gattcctttg ctttcaataa aagaaatacg tcagaactgt tgaacaatgt
     6241 gaacaataaa agtcctgtga ccagcttacg ataattggcc gggctttctt tccagtagtg
     6301 aagaaatgaa aagaatgaag tactcttttt ttcgattgat gcgtcatgct tcttttcttt
     6361 caaaagaaat gacgcaagca aggcaagcac gcccggaata aaggcgagat agaaaagcgt
     6421 tgcgtaattt ttcggatggt aatacaaata cattaatgcg aatgctggac cgaggacagc
     6481 accgaccgta tccatcgcgc gatgaaatcc gaaaac
//
LOCUS       DASQJI010000405         8850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1273790,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000405 DASQJI010000000
VERSION     DASQJI010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8850
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273790"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VEV83_11500"
     CDS             complement(<1..434)
                     /locus_tag="VEV83_11500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45788.1"
                     /translation="MYIKTKHHHSHHHIVSIAVIVGALGYFVDVYDLLLFSIIRKPSL
                     AELGLDPVTDGENILSIQMIGLLLGGILWGVLGDKRGRLSVLFCSILLYSMANVANGF
                     VHTYSQYAILRFVAGVGLAGELGASITLVSELVSKEHRGICTS"
     gene            1811..2608
                     /locus_tag="VEV83_11505"
     CDS             1811..2608
                     /locus_tag="VEV83_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HYK45789.1"
                     /translation="MNQMPYNMTRFIRRKLSVALSSLLLIPFAFGYSSPLSKVKRKAS
                     VLISARKHAVGKKSSTVELNAHQQVSAYESLELAKLGLSKEAFDYAMKGREYLAANGK
                     LQNQDILSIVDFSLPSSKKRLFIVDLKNNKLLFNTYVAHGRGSGNEMANEFSNVEDSY
                     KSSLGFYITGDTYNGKHGLSMRLFGQDKGFNDNANDRAIVMHSAAYVSEETIKQQGYI
                     GRSHGCPAVPEELNKPIIETIKNGTCLFLYSPDKQYAANSTIINTAV"
     gene            complement(2915..3865)
                     /locus_tag="VEV83_11510"
     CDS             complement(2915..3865)
                     /locus_tag="VEV83_11510"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK45790.1"
                     /translation="MKQTNVTAAIVSMIILNSLSAQNASSFGTKDPGLVNLKGTIYAL
                     DENTDKMPGDLDKRKAEGVIYTKSLDIPVRDFTEGFPGVTNRYEWFGIIYTGTFEIPK
                     AGVYTWTTTSDDGSILWIDDKLVIDNDGVHGFNSVDGDVELTAGMHRLKLWYFQGPAT
                     EIGLQLFIKPPAEDQKIFNLDDYSSGLSDAAKKVNATTTKEGIKIELPNNILFDVNKF
                     DLKPSAEETIAVVAEIIKSYPGSTVKIQGHTDATGNADANQQLSENRAKSVMSALTKK
                     GIPPDIKLQPEGFGASKPVASNDTEEGRAKNRRVEIMIKM"
     gene            complement(4008..4382)
                     /locus_tag="VEV83_11515"
     CDS             complement(4008..4382)
                     /locus_tag="VEV83_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45791.1"
                     /translation="MKKNLGIPIIAVVMLTAWTNKNAAVISSSKIDNGDTTSLRSPMD
                     TTSLILFKPCPPCCAGSSTNWPDILVSKNFWSKSIDGKKNELQNINTPALARFLGPEI
                     ATLESGTDLDRAVNSPADVSSR"
     gene            5083..6660
                     /locus_tag="VEV83_11520"
     CDS             5083..6660
                     /locus_tag="VEV83_11520"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45792.1"
                     /translation="MKLLLTGIFAVISIVSFAQLTPPNIQWQKSLGGSGSDYARSIEQ
                     TTDSGYIIAGSSSSHDGDVTTNHGHDDYWVVKLKKNGAIQWQKTLGGKKYDQAASIQQ
                     TMDGGYIVAGPSYSNNGDVTGLHGGSDTTFPDYWIVKLRKNGDVQWQRCLGGSHIDFA
                     TSIQQTADSGYIVAGWSTSNDGDVTGNQGAEDWWIVKLDKKGFIEWGKSIGGTKTDIA
                     NCIRQTTDGGYIVAGFSFSNDGDVKGNHGDVDYWIVKLKRNGIVEWQECLGGSGFDEA
                     TSIRQTSDSGYIVAGQSYSNDGDVTGNQGGDYWIVKLDKKGFIQWQKSIGSPGIDEAT
                     SVQQTLDGGYIIAGSSGGNSNVVHRNHGATDYWIVKLAKNSNIQWEKYLGGSYRDESY
                     SIQQTADSGYIVAGESFSNDDDVTGNHGSNDYWIVKLSKDGPPLVPVETNAFAENISK
                     NIYNEFSVYPNPAKNVLYIQTKSNTSFFLLNASGKIVFTKTINGSGSVDIKNLPAGNY
                     YLKNTTTGVVRKVIINK"
     gene            6898..7119
                     /locus_tag="VEV83_11525"
     CDS             6898..7119
                     /locus_tag="VEV83_11525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45793.1"
                     /translation="MRGDKRQKRDLHALNADGMVMCNPRDKEAAHRAQTEGIATENWN
                     AVTCRKCLSLLYKHNKLKGRKEEDDRGFL"
     gene            complement(7356..7844)
                     /locus_tag="VEV83_11530"
     CDS             complement(7356..7844)
                     /locus_tag="VEV83_11530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45794.1"
                     /translation="MKQIQTTVVALLLVLAFSCSKDNNSGASGQSGQSSASSSISSDA
                     QESIDQDVDVPVTGNWILYYDWLCSGLYSAVALDVYANGTWHTGSGYTGEWVEGRRIF
                     MRKYDGFETVYSGIIRSEKKISGIMTTWDGTHGCFYMVPATDPKFKAEINGSRDESGK
                     TR"
     gene            complement(8375..>8850)
                     /locus_tag="VEV83_11535"
     CDS             complement(8375..>8850)
                     /locus_tag="VEV83_11535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45795.1"
                     /translation="LPDLLTYQKNLFASPSTSNEALVVLYPLPAHSHAWYYAWLELPQ
                     FPFLKSRALYQQHVYSSRMQDILKNISVYNPEVVVMYGMDNINLLKRSVQQVFPSAKF
                     GMVKAVKRQIPQYHRADFNGTTMLLTTQIPALRHNRIETGFDWYQFGKLVKAHDS"
BASE COUNT         2587 a         1885 c         2007 g         2371 t
ORIGIN      
        1 gaggtgcaaa tgcccctgtg ttcttttgac accaactcac ttaccaatgt aatgcttgct
       61 ccgagttcgc ccgccagacc cacgccggca acaaagcgga ggattgcata ttgcgagtag
      121 gtatgcacaa agccattcgc gacattagcc attgagtata ataaaataga acaaaacaaa
      181 acgcttaatc ttcccctttt atcaccaagc actccccata atataccgcc aagtaataaa
      241 cctatcattt gaatactcag aatattttcg ccgtctgtaa caggatctaa acctaactca
      301 gcaaggcttg gtttgcggat gatgctgaac aataacaagt catatacgtc aacaaaatat
      361 cccaatgccc caacaataac ggcaatggaa acaatatggt ggtgcgaatg gtgatgttta
      421 gttttgatat acatgcagga gcatttagca gttgttaaat tttttggtcg ttgaatgtag
      481 gaaaaataca gtgcccacaa atggcgctga agaattattt tttcttttcg cctctccgca
      541 aagttgtacc gccttagggg tagtctcttg gcacaatgtt acggcgagca caatcatgca
      601 ggccactctg cgacatcagg gcgcagaagc tgggcattcg caacactaag gcaccgagca
      661 tccaaatggt gtgctgcgtt tcgtaatacg cgagccgccc tgcggttcgg ttccgacgca
      721 gtcggaaatc gacgaaggag attcgtgaac gcaaataaaa aataaaaata ccggtgagca
      781 attgaaaaaa tccgcgggac attttttcaa agaagcgcag gcagcgtcgg tgaagaagcg
      841 aagccctgaa gaatcttaat gcaccaaaac ataacgtctt ccaacatagt tgcaccatca
      901 ataagcctag atagaataat actactacgc agagggcggc gttggcccgg acgaatgcgc
      961 ggagccctgc ctgcgtgacg cagtcaggca gggatcatgc cgtccttgat ttccgaactc
     1021 gcagagtcct gcaacgcaca aggccacgcg agagactccg cggagaagaa aaaataaaat
     1081 gaattgcggg caggcggggg ttactttctt ttttcaagaa aagaaagtaa caatgtagaa
     1141 ttgaaaaatg acgattaaca aataagcagt tgttatttag ttattgcgaa agtgattttt
     1201 tacaagtttt tttctccgca gagtgtcctt gcacaatgcc aacggcgaga acgatcgctc
     1261 aggccaatac caaagtatcg gcacaggtct gcggcatcac ggcgtagagg ctgggcattc
     1321 gcaatagtaa cgcctcagag tcccttgctc gcgcacatac ccgcgcaaag gagactgtgc
     1381 ggaaaaagtc gaaaaatgat tgagagatta atagaattgc ataatagccc gggcaagccg
     1441 tagaatacgc aaagcatgtt tgtgaccata cattaaaaca gcaatatcaa agcaagctca
     1501 ctggaaatct aaatgtcttc aatattgtct ttaaagaata tatgctaaac aatagaaata
     1561 agtggtaatc taactttatt ttctgccaca gcagggcgtt cacagcatag cactgtgtaa
     1621 agcgagacct acgttaaatt tgcattcatt cctttgcact cgttctcctg cctaacccca
     1681 actattcgta gattgttgtt cggcataagg ctgtgattac gccgcctgtt gctccctggg
     1741 aaaggtgctg tttatccgtt aaaactgggc ttcagaagag cgaactggcc aaatttttgt
     1801 cccttttcta atgaaccaaa tgccatataa catgacacgc ttcattcgca gaaagttatc
     1861 tgtagcgctt agctcacttc ttcttattcc cttcgctttt ggttatagta gtcctctttc
     1921 caaggtcaaa agaaaagctt cggtgttgat atcagcccgg aaacatgcgg ttggcaagaa
     1981 gagcagtaca gtagaactaa acgcccatca acaggtaagc gcttatgaaa gccttgagct
     2041 cgccaaatta gggctgtcta aagaagcttt cgattatgcc atgaagggac gtgagtatct
     2101 tgctgcaaat ggtaagctgc agaatcagga cattctttcg atagtggatt tcagccttcc
     2161 ttcctctaaa aaaaggttgt ttattgttga tttaaaaaat aataagctgt tgtttaatac
     2221 ttatgtagcg catgggcgtg gttcgggaaa tgaaatggct aacgagtttt ccaatgttga
     2281 agacagttat aagagcagcc tcggctttta cataaccggt gacacctata atggcaagca
     2341 tggactttca atgcggctct tcggtcagga caagggtttt aacgataatg ctaacgaccg
     2401 tgccattgta atgcacagcg cggcgtatgt gagtgaagaa acaattaagc aacaaggcta
     2461 tattggacgc agtcatggtt gccccgcagt tcctgaagag ctcaataagc caatcatcga
     2521 aacgattaag aacggcactt gcctgttcct ttacagccct gacaagcaat acgctgctaa
     2581 ctctactatc attaatacag cagtataaaa gcgtcggttt tgttccggga aagtgtttcg
     2641 gaaagttgtc gccaacgaca gagtgtacgc agcaatcagc tgaattaact aatttctatc
     2701 ggtcggtgtc ctcaccaatc gaaataattt ttccttcgct tctccgcaga gtgtcctggc
     2761 aaaatgttca tagcgagcca atcatgcagg ccactctgcg gcatcagggc gcagaaggtg
     2821 ggatgaaaca tcaagctccg aactcgcaga gtcctgcaac gcacaaggcc acgcgagaga
     2881 tccgcggaga agaaagagcg gaaattgctg acaactacat cttgatcatt atttccacac
     2941 gacggttttt tgctctgcct tcttccgtat cattggaggc aacaggttta gacgctccaa
     3001 aaccctctgg ttgcaatttt atatctggcg gaattccctt ttttgtgaga gccgacatta
     3061 cagatttcgc acgattttca gaaagttgtt gattagcatc tgcatttcca gttgcgtctg
     3121 tatggccttg tatctttacg gtacttcccg ggtaggattt aataatttca gcgactactg
     3181 cgatagtttc ttcagccgac ggttttaaat cgaatttatt tacatcaaaa agtatgttat
     3241 tcggcagctc tattttgatg ccctcctttg tcgtggttgc atttactttt tttgcagcat
     3301 ctgaaagacc cgatgaataa tcatcaaggt taaaaatttt ctggtcttca gcgggaggtt
     3361 tgataaaaag ctgcaggcca atttctgtag caggtccctg gaaataccac aacttcagcc
     3421 tatgcattcc ggcagtcaac tcaacatctc cgtcaactga attaaatcca tgtactccgt
     3481 cattgtcaat aacaagctta tcatcgatcc acaagatact cccatcatcg gaggtcgtcg
     3541 tccacgtgta cacgccggct ttgggtattt caaaagttcc ggtatatatt attccgaacc
     3601 attcatagcg gttagttact ccggggaaac cttcagtaaa atcacgcaca gggatatcga
     3661 gggatttggt ataaataact ccctctgctt ttctcttgtc aagatcgcca ggcattttat
     3721 ctgtgttttc atccagcgca tatatagttc ctttaagatt cactaacccc ggatcttttg
     3781 tgccaaagct cgacgcgttt tgagccgata atgaatttag gattatcatt gatacaatag
     3841 ctgcggttac attggtctgt ttcataagaa ggttttgaat acagatttac aaaagggtga
     3901 atgcaaatct aattaaataa taaaccttcc caatgtcctt gcagtgcaaa ccaacccgaa
     3961 gacacattgc gcgcgagtgc gaagcgcgtc ttgcagatcg ctgcgtttca gcgggagcta
     4021 acatcggcag gagaatttac agccctgtct aaatcagttc cgctttcaag ggtggctatc
     4081 tcgggaccta agaaacgagc taaagcaggc gtgttgatgt tctgcaattc atttttcttt
     4141 ccatcgatgg atttgctcca aaagtttttg cttactaaaa tatctggcca attagtcgag
     4201 gaacctgcac agcaaggggg acatggttta aaaaggatga gtgaagttgt gtccattggg
     4261 gaacgcaacg atgttgtgtc gccattatca atttttgagc tcgaaataac tgctgcgttt
     4321 ttgtttgtcc acgcggtcaa cataacgacg gcgatgatcg gaatgccaag attctttttc
     4381 atacttgttt gttttaatgg tgatctgtta tttgttgaaa caaagctggg gcagccatgg
     4441 gggcgaagtc gtcgctaaac aactatgaat gggcgggtaa aaaacgattt tttgatccgt
     4501 tagatgacgg gagattgttg tggcttgttc agagagtcca gtccatcaac cataaatgca
     4561 taaatcaggc aggccgttct gcggcatcgg aactaaccgc atccttgaac aacacagata
     4621 ggaaagaagt caaactgcat aaagtatttc aaacatcgtt ttattggaaa gtttgcgtgg
     4681 cgagagaaag gaatgcagga cagaaaagtt cattcagcaa aagctgcatt atatacatta
     4741 gaatcgttat aaaggaaata aattagttca cttgcccaaa ctatatgaac atagttctgc
     4801 gaaattttac atcacagttg agcaaggtgt tgcgataaca agttttatgg agctacggga
     4861 tattaatttg acaaactcgc gtacatgaat ccgtcccgct aaatgcgcga tccttacttc
     4921 gcggcaaaag ctagcgtgaa gagacattgc gggcaagaga aagttttata acctgtgatc
     4981 tttggtattt aaaaggcggt ttaatcctca ggcaactgtt tttattgcca aaataaatta
     5041 ccttcctttt ctatcttata tttttacctt agaaccactt ttatgaaact gcttctaaca
     5101 gggatttttg cagtaataag tattgtaagt tttgcccagt taacacctcc aaacattcaa
     5161 tggcaaaaaa gtctcggtgg cagtggcagt gattatgcaa ggtcaattga acaaacaact
     5221 gacagcggat atattattgc aggaagttct tcttcgcatg atggcgatgt aacgacaaac
     5281 catggccatg atgattattg ggtggttaag ctgaaaaaaa atggtgccat tcaatggcaa
     5341 aaaacccttg gcggcaagaa atacgaccaa gccgcttcca tacagcaaac aatggacggc
     5401 ggatatattg tggcggggcc gtcttattct aataatggcg atgtaaccgg cctgcatgga
     5461 ggttctgata ccacttttcc cgattactgg atagttaagc ttagaaaaaa tggcgacgtt
     5521 caatggcaaa gatgcctcgg cggcagtcat atcgattttg ccacttcgat tcagcaaaca
     5581 gcagatagtg gttatattgt cgcaggctgg tctacttcca acgatggaga tgtaacgggt
     5641 aatcagggcg ccgaggattg gtggatagtc aaacttgaca aaaaaggttt tatagaatgg
     5701 gggaaaagta tcggcggaac gaagaccgac attgctaact gcatccggca aacaacagac
     5761 ggaggttata tcgttgcggg attttctttt tcaaatgatg gggatgtgaa aggcaatcac
     5821 ggcgatgttg attactggat agtaaaacta aaaagaaacg gaattgtcga atggcaagaa
     5881 tgcctaggcg gcagcggttt tgatgaggca acctccattc ggcaaacatc agacagcggg
     5941 tatattgtgg cgggacaatc ttattctaat gacggtgacg taacgggtaa ccagggcggt
     6001 gattattgga tagtgaaact tgacaaaaaa ggttttatcc aatggcaaaa aagcattggc
     6061 agccctggta ttgatgaggc aacttcggtt caacaaacac tagacggagg atatattatt
     6121 gcaggaagtt caggcggaaa cagtaatgtt gtacatcgta accacggcgc taccgattac
     6181 tggatagtca aacttgcaaa aaatagtaat attcaatggg aaaaatatct gggcggtagt
     6241 tatagagatg aatcatattc cattcagcaa acagcagaca gcggctatat tgtagcagga
     6301 gaatcttttt caaacgatga tgacgtaacc ggtaaccacg ggagtaacga ttattggata
     6361 gtaaaactta gcaaagatgg tccgcctttg gttcctgtgg aaacgaatgc atttgctgag
     6421 aatatctcaa agaatatata caatgaattt tctgtttatc ccaatcctgc aaaaaatgtt
     6481 ctatacatac aaacaaaaag caacactagt ttttttctac taaacgcctc aggaaaaatt
     6541 gtttttacaa aaactattaa tggtagtggc agtgttgaca tcaagaattt accagcagga
     6601 aattactatt tgaaaaatac tacaacggga gtagtgagga aagtaataat aaacaagtaa
     6661 gcaagaggtg acgctgtgat aacttttttt cggttgctta tcggcttgtc cgcggctacc
     6721 aaaatatttt cttgccacat gtctttgcat ggcttctggg cttggggggg cattttttca
     6781 aattgccatc caaatgaggt gtaaaaacat cggctccccg gagacttggc ggcgtagcaa
     6841 agaaaaactg aatttgtacc ttcacacaga ctttcataaa cagcttaaag aaaccaaatg
     6901 cgcggagata aaagacaaaa acgcgatctg catgcgctga acgcggatgg aatggtaatg
     6961 tgcaatccgc gggataagga agcggctcac cgtgcgcaaa cggaagggat cgctaccgaa
     7021 aattggaacg cagtaacatg ccgcaaatgt ttgtcgctgt tgtataaaca caataaactg
     7081 aaagggcgga aagaagagga tgaccgtggg tttctttagt cctggcatgg cctttttgtc
     7141 tttcctcaga agtctcctcg aaaaatctac aggtgaacga aaacatgcag cagtagggag
     7201 ggaccggcag catcatggcc caaaagctgg ctattcgcaa cgctaacgcc tcagagtccg
     7261 tcgcttgcgc acataacccg ctcaaagaga ctctgcgcaa actctcagcg ttagctttac
     7321 ctgtgcccgt cccgttacag aagcactcat tttatttagc gcgttttacc gctttcatca
     7381 cgagagccgt tgatttctgc cttgaactta ggatcggtag caggaaccat ataaaagcaa
     7441 ccatgcgttc catcccatgt tgtcatgatt ccactaatct ttttttcgct acggataatc
     7501 ccggagtaaa cggtttcaaa tccatcgtat ttgcgcataa aaattctacg cccctcaacc
     7561 cattcgccgg tataacctga acctgtgtgc cacgtgccat tagcatatac atctaatgcg
     7621 actgcggaat ataggccgct acatagccaa tcgtagtata atatccaatt gcccgtgaca
     7681 ggcacatcca catcttgatc tattgactct tgcgcgtcag aagaaataga agaacttgcg
     7741 gacgattgtc ccgactgccc ggaagcaccg ctgttgttgt cttttgagca ggaaaaggca
     7801 agtacgagta atagtgcaac aacagttgtt tgaatttgtt tcatgacttg gttttaatga
     7861 attctaaaaa atatcggtta aatgcggatc gagggcgcag cttgttgcgg agcttactga
     7921 tcaatctata aaaatatttt tattaatgca agtattttgg aagattattg ccgcatattt
     7981 tttcattctc cgcaggactt gtaccgcctt agcggtagtg tccctgcaca atgtcaacgg
     8041 tgggaacgat cactcaggcc actctgcggc atcagggcgc tgaagctcgg cattcacaat
     8101 actaacgcct cagagtccct tgctcgcgcg catatgcacg caaaggaggc tctgccgaga
     8161 agtcgaaaat atctacagag ctcagtaaag ttttacataa cgggtgaaca gggaatttat
     8221 caactcacga gttttatgga gctccaggac atttatctca ccaactgaca tcggcatcgc
     8281 agagtcctcc atgagagact ccgcggagaa gtctccgtag gtagttgttg accaccttct
     8341 cttttcgcac ggacttgtgc cggccggtgt aattctaact atcgtgtgcc ttcacaagtt
     8401 ttccaaactg gtaccaatcg aatcctgttt caatcctgtt atgcctcagc gcaggaatct
     8461 gcgttgtaag caacatggtt gttccattaa agtctgcccg atgatactgt gggatttgtc
     8521 tctttacagc tttaaccatc ccgaatttcg cagaaggaaa gacctgctgc acagatcttt
     8581 taagcaagtt aatattatcc atgccgtaca tcacgactac ttccggattg tagacactta
     8641 tgttcttgag aatatcttgc atgcggctgg agtacacgtg ctgctggtat aatgcacggc
     8701 tcttgagaaa tggaaattgc ggcagttcga gccaggcata gtaccacgca tgactgtgtg
     8761 caggcagggg atatagcaca accagcgctt cgttggaagt tgatggtgat gcaaataaat
     8821 ttttctgata ggtgagtaga tcaggaagtt
//
LOCUS       DASQJI010000406         5587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_968198,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000406 DASQJI010000000
VERSION     DASQJI010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5587
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968198"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VEV83_11540"
     CDS             complement(<1..422)
                     /locus_tag="VEV83_11540"
                     /inference="COORDINATES: protein motif:HMM:TIGR03803.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HYK45796.1"
                     /translation="MHHITTTTNAAIGHRLPVTGRQQPATNRQLKTGNRQLLKHTCRF
                     FFAMLISISFNISHAQDVLVGLTSNGGPDNKGTAFSIKSTGANFTLMQTFADWGKTPS
                     EDLVLGNDGNFYGTASTGGLYNNGTIFKVTPAGAVTVI"
     gene            complement(1253..1519)
                     /locus_tag="VEV83_11545"
     CDS             complement(1253..1519)
                     /locus_tag="VEV83_11545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45797.1"
                     /translation="MNIDEQISKTYGDTMKTLAKMIQPIDTKRVAESITLKDASEENL
                     KKIAELIKEGNKKDWTQKHPVSFAVIMCIVSAVLGGLVTHYFNW"
     gene            1874..2974
                     /locus_tag="VEV83_11550"
     CDS             1874..2974
                     /locus_tag="VEV83_11550"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45798.1"
                     /translation="MAVARFIFTCVVLMPSVLTAQSGTSKTTADKTCTLPLITEFKIF
                     NEDLSLDSVLRLKEIKLSPQKNSFTISFAATDTANNVYYMLDGADKKWIRGHRSATIN
                     YTLLPPGRYDFKFKCNDQEKTALVIIIAVPFYLSSWFIILGCAAFVGVAYFLHTLSVK
                     RLMAVEAVRQRVSRDLHDDIGSTLSTINILSMMAKSKIIEDPVKASEYIGKIGDNSSR
                     LMEAMDDIVWSINPMNDTMQKIFARMREFATEVFEAKEINTHFHFDERTYDLSLNMEQ
                     RRDFFLIFKEAVNNVAKYANATEVNIDVMFKDHTLSLIVKDNGNGFDVANADTGNGLN
                     NMQKRAEKLNAKFDISSEQNAGTTVSLEMHVG"
     gene            3032..3667
                     /locus_tag="VEV83_11555"
     CDS             3032..3667
                     /locus_tag="VEV83_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK45799.1"
                     /translation="MTRLLIYEDNPQFREGLTMLINGTIGFEVLAAFKNCNHVVDEVE
                     AFKPDVVLMDIDMPGTNGLQGLKLIREHNTDVKVLMLTVFDDNKNVFEALKAGANGYI
                     LKKTQPAKLLEYIQDAQTGGAPMTSSIATQVLKMFSEVHSKTPDENYDLSDREKEVLQ
                     LLVNGYSYKMIAAEMFISIDTVRSHIKKIYEKLQVNSKGEAVAKAFRNRIV"
     gene            complement(3698..4288)
                     /locus_tag="VEV83_11560"
     CDS             complement(3698..4288)
                     /locus_tag="VEV83_11560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45800.1"
                     /translation="MKFSNTRILGIIGIIGAPWMFIDFINNGFYEHFQVSAASGVRNF
                     LFMTGWICSLLGLYKLRALGDKIWQKMIFILQMLFLLLAEVWSVMEMTKAGRTSRFFF
                     TLNYSWHVAGFLMILTGTQILRKNQLKGWKRFVPLLAGFWFPGTLCIYFFTGNSVAMV
                     LLSGVYSMIVFSLLGFTVATQDNVASLPPQRSHNVH"
     gene            complement(4355..4942)
                     /locus_tag="VEV83_11565"
     CDS             complement(4355..4942)
                     /locus_tag="VEV83_11565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45801.1"
                     /translation="MKFLSPRILGIIGIIGAPWMFIDFVNNGLYEHFMLTPISGMRNF
                     IFMAGWICSVIGLYKLGAEGNKRLARTILIIQLVLLLLAAIWSIMVMIAPNSPSKIFY
                     ALNFSWPLGGCFMVATGLVILLAKKLKGWKRFAPLLAGLWFPQTILIYAFTQNSVLLL
                     MLSGIYSTIAFSLLGLAVATETDRSLITKAAAYKS"
BASE COUNT         1570 a         1213 c         1204 g         1600 t
ORIGIN      
        1 tagatcacgg ttacagcgcc agccggtgtg actttgaaaa tcgttccatt gttatagagc
       61 ccgccggtgc ttgcggtacc gtagaaattt ccatcgttac caagtactaa atcttctgaa
      121 ggtgttttgc cccagtcggc aaacgtttgc attaaagtaa aatttgcgcc ggtgcttttt
      181 atggagaacg cggtgccttt gttatccggt ccgccgttgg acgtgaggcc gacgaggaca
      241 tcttgtgcgt gcgaaatgtt gaatgagatg ctaattagca ttgcgaagaa aaatcggcat
      301 gtgtgtttta aaagttgccg gttaccggtt ttcagttgcc ggttggtggc cggttgctgg
      361 cgaccggtga ccggtaaccg gtgaccaatt gcagcattcg ttgtagtagt aatgtggtgc
      421 atgacattta atttttaatg gggtcaaaag tagatttggc ggatgcgcag ggcaatcgca
      481 taaggatgtg aatgtggggt gagttcgtga gtgggaactc acatgttttg tgttgcggtc
      541 atgccgacga tcctacgcga tgtagcgtct catgtgcagg atgcctgcca agtacaccat
      601 ggttgtcatt ataacgtcag gaggaatctg caacgcaata cttaaacgta tgccacgctt
      661 ggctttttgg gttgctaaaa aatggccaac ctgttgcacg tctttcccgt gaaaacggga
      721 atcttcttct caacttttga gattgctaat tcatataaac ctgtcgctct tatttgttcc
      781 tccgttttca aatttctgcc ttgccacttt ctttttaaaa taaccgattg ctttgttttc
      841 acttctcatt catagtttgc attgttactt tctttttctt gaaaaaaaga aagtaaccaa
      901 agaaaattca agaaagaaac gatatacagc ccgtttcttt cattcgccct gatttagctg
      961 ttgtactact gtggcttcag caattgggcc ttgattatta actcgacgaa ctgaagtaag
     1021 agttaattga aaatatttcg aagaccgctc ccgctcttgc ctcatcgagg ttctaagacg
     1081 acattacgct ctatgacgtc atccgcgcga aggcggggat ccgatctcat gccggttcta
     1141 gtgttcattt ctattaaacg cttcgttttt tatttcttgc tttcgtttga attgtgcatt
     1201 gttactttct ttctcttaaa aggtaaccat atacgtgttt aaacagacta attcaccaat
     1261 taaaataatg tgttactaag ccgccaagaa ctgctgaaac gatacacatt ataactgcaa
     1321 atgagacggg atgtttttgc gtccaatctt ttttattccc ttccttaatt agttcagcga
     1381 tcttttttaa attttcttct gaagcgtctt ttaacgttat tgattcagca acacgcttgg
     1441 tatctattgg ctgtatcatt ttggcgaggg tcttcatggt atcgccgtat gttttggaaa
     1501 tttgctcgtc aatattcatc tactttttct ttttagttat tttcttcggt ttccgctcgg
     1561 gattgccttt tacggatgcc tttttaaaca tcttcccagt tgcattgatt acagctttat
     1621 ctttcttttc ccatgaaggc aaagttagca gagtctttta gcaagccaat taataaagtt
     1681 attcacttgc cgaaagactt tgcaccccct ttactttgga aggcccgcag gaatgtcgaa
     1741 cctgcaacac gcagaagggg tcaggtcaaa atcgcgtttc ttcgtgtgcg ttgtgccatc
     1801 ttagtgttcg ttgtgaccct tcttcaccct tacttttgtc ccaatgacat cagtgcgctc
     1861 acataattat ctaatggccg tcgcacgatt tattttcaca tgcgtagttt taatgccttc
     1921 cgtcctcacc gcacaatccg gcacgtcaaa gacgaccgct gacaaaacct gcaccctccc
     1981 cctcatcacc gaattcaaaa tattcaacga agacctttcc ctcgattccg tcttacggtt
     2041 gaaggaaatt aaactttcac cgcagaaaaa ttcattcacc atttcatttg ccgcgacgga
     2101 tacggcgaac aatgtttatt atatgctcga cggcgccgat aagaagtgga tcaggggtca
     2161 cagatcggca accataaatt atactttgct tcctcccggc cgctacgatt ttaaattcaa
     2221 atgcaacgac caggaaaaaa cggcattggt tattatcata gctgttccat tttatctctc
     2281 gtcgtggttc atcattctcg gctgcgcggc gttcgtcggc gttgcatatt tcctgcatac
     2341 gctcagcgta aaaagactga tggcagtgga agcggtgaga caaagagtgt caagagacct
     2401 tcacgatgat atcggctcaa cactcagcac catcaatatt ctgagcatga tggcgaaaag
     2461 caaaataata gaagaccctg taaaagcaag cgaatacatc gggaagatcg gcgacaatag
     2521 cagtcgttta atggaagcga tggacgatat cgtctggagc atcaacccca tgaacgacac
     2581 catgcaaaaa atatttgcac gcatgcgtga atttgcaact gaagtcttcg aagcaaaaga
     2641 gatcaacacg cattttcatt ttgatgaacg tacctacgac ctttcgttga atatggaaca
     2701 gcggcgagat ttttttctca tattcaaaga agcggtcaat aacgttgcaa aatatgcgaa
     2761 cgcaacggaa gtgaatattg atgtgatgtt caaagatcac acgctttcat tgatagtaaa
     2821 ggataatggc aatgggttcg acgtggcaaa tgccgacacc ggcaacggct tgaacaatat
     2881 gcagaagcgc gcagaaaagc tgaatgcgaa atttgatatt tcatcggagc aaaatgcagg
     2941 cactactgta tcgctggaaa tgcacgtcgg ataatcacat gcttatgtga ttgcgtacaa
     3001 aaaatgaaaa tctacttttg cttttattgt tatgaccaga ttgctgatat acgaggataa
     3061 cccgcagttt cgcgaaggac tgacaatgct catcaatggc actatcggct tcgaagtgct
     3121 tgctgcgttt aaaaattgta atcatgtggt ggacgaagtg gaagctttta aaccggatgt
     3181 ggtgttgatg gatattgata tgcccggcac aaacggattg cagggactta aactgattcg
     3241 cgaacataac accgacgtga aagttttaat gctaaccgtt tttgatgata acaaaaatgt
     3301 tttcgaagca ttgaaagccg gcgcgaatgg atacattctt aaaaaaactc agccggcaaa
     3361 acttcttgaa tatattcaag acgcacaaac aggcggcgcg ccaatgacgt cgtctatcgc
     3421 gacgcaagtt ctgaagatgt tttctgaagt gcattccaaa actccggatg agaattacga
     3481 tctgtcggat cgtgaaaagg aggttctgca attgcttgta aacggataca gttataagat
     3541 gatcgcggcg gaaatgttca tctctatcga tacggtacgc agccatatca aaaagatcta
     3601 tgagaagctg caggtcaaca gtaagggtga ggcggtggca aaggcgttta ggaataggat
     3661 tgtgtaacgg tcgggacggt ggagcggcct gacattccta gtgtacattg tggcttcttt
     3721 gtggtggtag ggatgcgacg ttatcctgag tcgcaacggt aaaaccaagc aaactaaaaa
     3781 cgatcatcga ataaactcct gaaagcagta ccatagctac ggagttccct gtaaaaaaat
     3841 aaatgcaaag cgtgcctgga aaccaaaagc ctgcgagtaa aggcacaaaa cgtttccatc
     3901 cttttagttg gtttttccgg aggatctggg taccggtcag aatcattaaa aatcctgcaa
     3961 catgccatga ataattcaac gtaaaaaaga accgggaagt cctgcccgct ttggtcatct
     4021 ccataacaga ccagacttcg gcaagcagca agaagagcat ttgcagtatg aaaatcattt
     4081 tttgccaaat cttgtcgccg agagcgcgta atttatataa gccaagtaaa ctgcatatcc
     4141 agccagtcat aaacaaaaaa tttctcacac cgcttgcagc tgaaacctgg aagtgttcat
     4201 aaaaaccatt attaataaag tcaataaaca tccatggagc gccgatgata ccaataattc
     4261 caagtatgcg tgtatttgaa aatttcattg ctgtggtgac taccaaacag gtttggtaaa
     4321 gtttattcgt ttatctcaca taattgcctt cgatctaact tttgtatgcc gcagcctttg
     4381 ttatcaatga ccgatccgtt tcagttgcga cagcaagccc tagcaaacta aaagcgatag
     4441 ttgaatagat accggaaagc atcagcagca acaccgaatt ttgtgtgaaa gcatagatca
     4501 gaatcgtttg tggaaaccat aagccggcaa gcaatggcgc aaagcgcttc cagcccttaa
     4561 gctttttcgc cagtaagatc acaagaccgg tcgcgaccat aaaacatcct ccgagcggcc
     4621 aggaaaaatt aagcgcataa aagatcttgg atggcgaatt gggcgctatc atcaccatga
     4681 ttgaccaaat tgccgcaagc aaaagcaata cgagttgaat gatcagaatt gttcttgcca
     4741 atctcttgtt tccttctgca cctaatttat acaggccgat cacactgcat atccaccccg
     4801 ccataaaaat aaaattcctc ataccgctta ttggagtgag cataaagtgc tcatacaatc
     4861 cattatttac aaaatctata aacatccatg gcgccccgat aataccgatg atgccgagta
     4921 tgcgcggact taaaaacttc atgttgtaag ggttagtcaa aagcggttca atatagcgtt
     4981 ttgtttttat aatttgcctt tggcagaaaa cacgccactg tcatttcggt cccgatacgt
     5041 caggcgaaga aatctctacg aatgttaaaa gcaatccgga gagatttctc agtcgagaca
     5101 gtgtgagttc gaagaatcgg ctgttctttt cgctccttcg aaatgacgat gttacggctt
     5161 cattagcgac gatcatctgt gcgatctctg cgcctttttg taatctcgct ttgtcagaaa
     5221 atacgccact ttatttcggt ccctatagta ggagagaaat ccctacgaat gctaaaagca
     5281 atccggagag atttctcagt cgcgacagtg tgagttcgaa gaatcggctg ttcttttcgc
     5341 tccttcgaaa tgacgatgtt acagctccgt tatccgtaat catctgtgcc atctgtgcta
     5401 tctgtgagag tcttttctca catccacaaa tcatgtgata ccctggacgg attcattcat
     5461 tattccacac atacatgcga ttgtcttcgc atatcgacgc ttctactttt gatgcattca
     5521 taaacgcaaa aaataaatta tcatgagcac tcggactttg ggattactgg gcattctcgg
     5581 cagcccg
//
LOCUS       DASQJI010000407         1585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_47008,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000407 DASQJI010000000
VERSION     DASQJI010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47008"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1178
                     /locus_tag="VEV83_11570"
     CDS             <1..1178
                     /locus_tag="VEV83_11570"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45802.1"
                     /translation="IPSLCYYEHIEPPLGTCRVCTCKIKGKYGPACTEKISEGLSVEV
                     NTPELQDTRKALVEMMFAEGNHVCPACEKSGNCDLQHMGYELGVSSTRFQHLFKDRII
                     DFKPKRLIMEHNRCIKCLRCVVDVQTDDGKKVFTYQNRGNETYVGVDYEQEAKLSEEQ
                     AMNAMKICPTGAIIVRGVSMAKPFGERKFDMESVQTKYDRKTPIHKKPAAMNKKIIAT
                     VSLAGCFGCHMSMLDIDEELLDVMELVSLDKSPLTDIKNFTSRCHLGIIEGGCCNSEN
                     IETLRKFRGHCDILVAIGECSTWGGLPTMRNSIPLSECLEEAYLNSVTNEPGNTIIPY
                     HEDLPKILDRVYACNEIVKIDYYIPGCPPDPNHIWKVVRNILFGEEYSILYSEFKYD"
     gene            1193..>1585
                     /locus_tag="VEV83_11575"
     CDS             1193..>1585
                     /locus_tag="VEV83_11575"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HYK45803.1"
                     /translation="MTRKITIDPVTRVEGHGRVTIHLDEYGQVEDCFFHITEFRGFER
                     FIQGHPYWEAPVLVQRLCGICPVSHHLAAAKAIDQIAGIDPKDLSPTATKLRRLMHFG
                     QVFQSHALHFFYLASPDLLFGADAPVEKR"
BASE COUNT          466 a          334 c          372 g          413 t
ORIGIN      
        1 tcattccatc actatgttat tatgaacata ttgaacctcc gcttggcact tgccgtgtct
       61 gcacctgtaa gatcaaggga aaatatgggc cggcatgcac ggagaaaatt tcagaaggac
      121 tttctgtcga agtaaataca ccagaactcc aggacacccg caaagcactc gttgaaatga
      181 tgtttgccga gggaaatcat gtctgtcctg cctgcgaaaa aagcggcaac tgcgatctgc
      241 aacacatggg ttatgaactg ggcgtttctt caacgcgctt tcagcacttg ttcaaagacc
      301 ggattatcga cttcaagcca aagcggttga tcatggaaca caatcggtgt atcaaatgcc
      361 tgagatgcgt tgtagatgta caaactgatg atgggaaaaa agtattcacc tatcaaaacc
      421 ggggaaatga aacttacgtc ggtgttgact atgagcagga agctaagctc agcgaagagc
      481 aggcgatgaa tgcgatgaag atctgtccga caggcgcaat catcgttcgc ggagtgagca
      541 tggcaaaacc ttttggcgaa agaaaatttg acatggaatc tgtgcagaca aaatacgacc
      601 gcaaaacacc aatccataaa aagcctgcgg ccatgaataa aaaaattatt gcaacagttt
      661 cgctggccgg ttgctttggt tgccacatgt caatgctcga tatagacgaa gaacttctcg
      721 atgtaatgga acttgtttca ctcgacaaat cgccgttgac cgatattaaa aatttcacaa
      781 gccgctgcca tcttggaatt attgaaggtg gctgctgcaa ttcagagaat attgaaacgc
      841 ttcgaaagtt ccgcgggcat tgtgatatcc ttgtagcgat aggtgaatgt tcaacatggg
      901 gcggacttcc aacgatgagg aactctattc cactgtccga atgcctggaa gaagcttatt
      961 tgaattctgt aaccaacgag ccgggaaaca cgataatacc ttatcacgaa gaccttccga
     1021 agattcttga cagggtttat gcgtgtaacg aaattgtaaa gattgattat tacatccctg
     1081 gatgtccacc cgatccaaac catatttgga aggttgtgag aaatattctt ttcggtgaag
     1141 aatattcaat cctgtactct gaatttaaat atgattaaat gatgaacagc tgatgacgag
     1201 aaagatcacc atagatccgg ttacaagagt tgaaggccat ggcagagtta ctatacatct
     1261 tgatgaatac gggcaggtgg aggattgttt ttttcacatc actgaattcc gcggctttga
     1321 acgatttatc cagggccatc cttattggga agcgcctgtg ttggttcaaa ggctttgcgg
     1381 tatttgcccg gttagtcatc atctcgcggc ggcaaaagct atcgatcaaa ttgcgggcat
     1441 agacccgaaa gatctttcac caacagcaac gaaacttcgc aggctgatgc attttgggca
     1501 ggtgtttcaa tcgcatgcgt tgcatttctt ctatctcgca tctcctgatc ttttattcgg
     1561 ggcagatgcg cctgtagaaa aaaga
//
LOCUS       DASQJI010000408         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2811645,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000408 DASQJI010000000
VERSION     DASQJI010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2811645"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VEV83_11580"
     CDS             complement(<1..847)
                     /locus_tag="VEV83_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45804.1"
                     /translation="MKPFLFSLALLGCGLMLKAQTDKQPFLTKSLTGQNISNARMEAS
                     GGSISVTGVNESEARLEVYVTPNNNEDLSKEEIQKRLDEYYTMDISISKGQLVAIVKQ
                     KHAIENNWRKAVNVSFRAYLPVNVTTDLETSGGSIALSNLNGEHEFTTSGGSISIDHV
                     KGKMKGRGSGGSIHAVNCSNDIDLVTSGGSIDAKDCTGEMRLRTSGGSLDLDNLDGKI
                     EAETSGGSIHADEIKGELVTSTSGGSIRLKNLSCDVEAETSGGGIDAEISDATKSVRL
                     RNSGGN"
     gene            complement(1304..>2279)
                     /locus_tag="VEV83_11585"
     CDS             complement(1304..>2279)
                     /locus_tag="VEV83_11585"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK45805.1"
                     /translation="FKEKVVTNPDIIKNELLKNPDILSVGKASNVIGDDLSVESVTPV
                     NATKDQEFATVRVMRIDDQYLNTLNIKIKEGRNFSRAFNDSASFILNEAAVKTLGLKQ
                     PVGASVVNNTRNVQGKVVGVINDFNYTSLHHQVEPLVLEYNPWATDALFIKIKAGKTA
                     EAISFLKSKITQLSPNTMFSYGFLDEKIAGLYSKENNMSEVLKLFAVLSIIISCLGLF
                     GLIAHAAEMRTKEIGIRKVIGAGTGTIVTLLSKDLLLLVLIGNVIAIPLAFYGIHKWL
                     QEFTYRIDISWTVFAVSLFVTLMIALITLSWHGIRTASVNPVKSLRTE"
BASE COUNT          567 a          549 c          432 g          731 t
ORIGIN      
        1 tgttgccccc ggaatttcga agcctgacag atttcgtcgc atctgaaatt tcagcatcta
       61 ttccgccacc gctagtttca gcttcaacat cgcacgaaag attcttcaat cttatacttc
      121 cgccggatgt ggaggtgacc agctcgcctt ttatttcgtc ggcatgaata ctgccgccgc
      181 tggtttcggc ttcaattttt ccgtcgaggt tatcaaggtc caatgaccca ccggacgttc
      241 tcaatctcat ttcacccgtg caatcttttg catcgatgct tccgccgctt gtaacaaggt
      301 cgatgtcatt cgaacagttt accgcgtgaa tgctcccgcc cgagccgcga cctttcatct
      361 ttcctttcac atgatcgata gaaatactgc cgccgcttgt agtgaattca tgttctccat
      421 tcagatttga aagcgcgatg ctgccgccac ttgtttcaag atctgtagta acatttacgg
      481 ggaggtatgc acggaatgaa acgttcacgg cttttctcca gttgttctcg attgcatgtt
      541 tttgtttaac tattgcaaca agttgtcctt tgctgatgga tatatccata gtgtaatatt
      601 catcgagacg tttttgaatt tcttccttcg aaagatcttc attgttgttt ggcgtcacat
      661 acacttcgag gcgtgcttcc gattcgttca cacctgtaac gctgatgctt ccgccggaag
      721 cttccattcg tgcgttgcta atgttttggc cggtcaagga ttttgtaaga aatggctgct
      781 tatccgtttg agctttcagc atcaagccgc agcccaggag cgctaaagaa aagagaaatg
      841 gtttcatgtt ttattgttgt ttttgatgcc cccagcccct aaaggggagt tcggcatttg
      901 tttgataatt cacttttgac aattcagaat ttttatgtta ccagcttcag ctttttcatg
      961 gcgtcaactg ttgcgtcgca ctcttgtacg ttcagctttt atggcatctt cgtgtcaaag
     1021 tgaaaatgct tttaataaat taacgcgcta ttgtttgctt ttacttgtta cggccgcccc
     1081 tacggggctt atttaaaaaa ctactgtcga ttctataaac aggttgctcc tacggagcga
     1141 ttgacgattc acaattcacc attcacctgc actattcaca attcgatatt cacaattcac
     1201 cattcgcctt gactattgac cattgacaga ttcactattg acaattcacc attcaccact
     1261 cacaatcgaa ccactcatta ctcatctctc atcactcatc cgtttattct gtgcgaaggc
     1321 tcttcaccgg attcactgaa gctgttctta tcccatgcca gcttaatgtg atcaatgcga
     1381 tcattaatgt tacaaaaagt gatacggcaa ataccgtcca cgatatatca attctgtatg
     1441 taaactcctg cagccatttg tgaataccgt aaaatgcaag cggaatggct ataacattcc
     1501 cgataagcac tagcaacaac aggtcttttg aaagcaacgt gacaatagta cccgtaccag
     1561 cgccgatcac ctttcttatg cctatttctt ttgttcgcat ctctgcggca tgtgctatca
     1621 aaccaaataa acccaaacaa gaaataatga tagaaagcac ggcgaataat ttcagcacct
     1681 cgctcatatt attttctttg ctgtataagc ccgcgatctt ttcgtcaaga aaaccgtagc
     1741 tgaacatagt attgggcgat agctgtgtga tctttgattt caagaaagat attgcctccg
     1801 ctgttttacc tgcctttatt ttgatgaata aagcatctgt tgcccacgga ttgtattcca
     1861 gcaccagtgg ttcaacctgg tgatgcaggg aagtataatt aaaatcgttg atcacgccca
     1921 ctactttccc ctgtacattg cgcgtgttgt ttacgaccga agcgccgaca ggttgtttca
     1981 gccccaaagt ctttacggcc gcttcattca aaataaaaga agcggagtca ttgaacgctc
     2041 ttgaaaaatt tctgccttcc tttattttta tgttgagcgt attcaaatac tggtcgtcaa
     2101 tgcgcattac tctcaccgta gcaaattctt gatcctttgt tgcgtttacc ggcgttaccg
     2161 attcaacact cagatcatca ccgatcacat ttgatgcttt gccaacagat aaaatatccg
     2221 ggtttttcag gagttcattt tttataatat caggattagt gacaactttt tctttgaat
//
LOCUS       DASQJI010000409         9730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1736394,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000409 DASQJI010000000
VERSION     DASQJI010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9730
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736394"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VEV83_11590"
     CDS             <1..718
                     /locus_tag="VEV83_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45806.1"
                     /translation="YAERIQGRQVLIEDNDKYILTHVPATTYTQNLDSEKRVLTVQGS
                     NLTGTVSNEWKGEEKENILYHLNTTRKDKSEDALKKYLSEDNGDYKINNLVTSDINNI
                     DGDLTATYALTHNNAVSSFGKDYYVDLDFQKDLNGLDFDSTRELDYLFPYKTHVERIT
                     ELTIPSGYKITSLPANLSINNNDYDFEINYIETAGKVVYRKSIALKSTRISKQNFKQW
                     NADVARLTEAYNQQLVLTAQ"
     gene            727..2949
                     /locus_tag="VEV83_11595"
     CDS             727..2949
                     /locus_tag="VEV83_11595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45807.1"
                     /translation="MRGKFLLTGLLAFVVIQLDAQKDEKAYRQRSQEVQAEIWNNAPQ
                     AFSVKTIPAEMNNESAVIIATSFNVINSSKARLKFAALTTVQRMFYQTTFHERVKIND
                     KAALDDYSTLEYQKKLDKTVSALFIKVYNKMDTYVGAKIIKPNGKEVMVNTDEEVLTK
                     DDTRRQDGKIAIPDLQVGDILDYYLCTEKLQEYVTEVQGPYTFFLGGDYPILYQGIRL
                     QLDEKSGVEYVSANGAPALKESRDDDNNIILSIEEKNLPKLQTSVFASPYRQYPYISL
                     QYMFVTKKDDASTHFNRGEVKHGSLSDDLLTQFKTILQNPSMSIDYSPYDITATYFGG
                     ERAMKAVPQDSVIKVLYKAWRYQIFCSFSTHDIDMSNDINYATANSLYGAISMSRMLR
                     KIGIDHDIVLLCPRTSNKLKDVMEIGDFSALIHVKLKKEYWLAFYDVVTQFNEIPVWF
                     QGEQGLVFKPDVDAKHLSYEQSGTIKVPVDGPEKNTRTENINVGFDATGMQQLKIDRS
                     TELTGYMRHYTQKELMLMEDMEADLATAVNEKKLTERLADDKKQKKLVDEFTAAFAHE
                     RTRSKSYFEDEIKDRYDQEAKQLASYEVEKNGMFNAEFAYHTTFTMDNFVKRAGNNYI
                     LEAGKLIGSFNKLDEKDRTRTIDVYTPCAQICTYNVTVSIPHGYKVKGLENFSKTLNN
                     ETGSLTASAIADDTAVHITIKQSFASNFEPAANWPKLVELMDGLYDLSSQKLLLEKSN
                     "
     gene            complement(3387..7148)
                     /locus_tag="VEV83_11600"
     CDS             complement(3387..7148)
                     /locus_tag="VEV83_11600"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HYK45808.1"
                     /translation="MALPHLIKYIYNNGTDEVIRRGKKIFSLGYVEVIETDELLGSIV
                     FRVRDDAYNTFYKIYISRYNDLQAISVRCSCPYNLGDICRHEAAALFRLQELVDSNQL
                     GETDTEFNQQHTVIKMKQLEIRSLKLLSAPDILPAAEDYLRSHKANILEAANDLVKAE
                     MTYEGRDYLLQIRRNDDRTFDTSCNCTSETKHPLCLHKTILFLQLLTSYGPTYFDSIS
                     NRDREKNKLLALYGYTTDDDIEGKFEFTYREGKPFLRVLDPSIKRVIAPPVEQRKPFF
                     VPVQKETQVEEKPAEVFPRQKLGFVLRYDDQQYPYAQVDVVKGEADYANKEFTGKVER
                     LDLTKFVNTEDLDEDDKMLIQHVRKLLPAEVTRYLNRNSPFSGIWENIIQQHNDELPE
                     ETRHLIIEYLLPKYKKLFSELSESEFVYTLPYRKPFVTGNLQQAAFSNHYIQPQFVVS
                     YNENVYEVRCFAKLIDAVVPVEENVIASPFILQSANTFYLWQNAEDSLLAERFLANGK
                     IVITEQDWNHQLLEFILPLTKTYDVQFNGIRKEEIKNIRPDIRILLKEKGDYLLFQPY
                     FNYNGYDVKQRDKERIIIPSAGKLIIIHRNAQAEMELVRKIENLHSSFIRPDNSDTLA
                     LKGTDVLKNNWFFLFADTMKEMNIPVYGFDALKKFRFNTAKPTTKIFISSNTDWFDAK
                     IDIHFGDQKITVADVKKALANKQQFVPLQDGTLGILPEDWIRKYSMLFRVGEGKTTNI
                     KLSKYHFGVIEELYQQRNEEELFFQLEKKYERLKEHHTIREIEPPSHLRTVLRPYQVS
                     GFHWLNYLNEVNWGGILADDMGLGKTVQALSFLHHSKEVNGSLRALVVCPTTLMYNWE
                     NEIKKFTPSLTWLIHHGSGRSQQTVQYENADIIITTYGTLRSDIQLLTASVFDYVILD
                     ESQAIKNPQSKVTKAAGLLNAKTRLCMSGTPLQNNTFDMYAQMNFLNPGMLGSMEFFR
                     QEFAIPIDKFGEKEQKDHLRKLLYPFILRRTKEQVAKDLPEKSEMILFCEMSDEQRKI
                     YDAYRNDYRDKILGTVDDKGVQKSQLTILQGLMKLRQICDSPAIIKEEEQYPNVSVKL
                     EELGREISENIGDHKALIFSQFLGMLALIKERMKELEIDYEYFDGSTSAPDREKAIQR
                     FQNDDNCRVFLISLKAGGVGLNLTAADYVYIVDPWWNPAVEQQAIDRTHRIGQTKNIF
                     AYRMICKDTVEDKILKLQERKRALAAELITDDATFVKSLSREDVEYLFS"
     gene            complement(7303..8028)
                     /locus_tag="VEV83_11605"
     CDS             complement(7303..8028)
                     /locus_tag="VEV83_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HYK45809.1"
                     /translation="MPQKPSLHTLLSPRLLDLYDVSESIVVIIDVFRATSTIATALYN
                     GAEKVIPVADVQDCIDLGTKLNAITAGERDGKIIEGLQHGNSPAEYFRSFVEGQTLVL
                     TTTNGTRLLHMALNKGASQVITGSFPNLTSVCNHLLAARKNIILGCSAWKDRFNMEDT
                     LFAGAVIHRIKHQFTVHCDSSLMAEDMYCLHKDDLYEFVQKTTHWHRLASYGLEKDLQ
                     YCVSPDVADVLPVYREGALIANY"
     gene            8126..8719
                     /locus_tag="VEV83_11610"
     CDS             8126..8719
                     /locus_tag="VEV83_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5606 domain-containing protein"
                     /protein_id="HYK45810.1"
                     /translation="MEYTKLISVTGLSGLFELIASKGDGAIVRSLEDNSTRFVSSRTH
                     NFSHIESIEVYTGGDNVNLADVFHVMEESKEPLPSEKDGAAVKKYFEKVYPDMDFERV
                     YTSDMKKMVRWFDVLKKNNVEIKLSDEDEKGTVDGEEKKESTEEENNAAAISSEIGVD
                     TEKEKKIESEVPTGSLKRDAAKKKSETEGAREKITKK"
     gene            8816..>9730
                     /locus_tag="VEV83_11615"
     CDS             8816..>9730
                     /locus_tag="VEV83_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HYK45811.1"
                     /translation="MELTADIKKIERHYIPNDFTVTTWEALEPFFKELLERSIASEQD
                     LERWMRDMSELEAVVSEDACWRQIRMTCDTTNKSLEEAFTYFCMEIQPKLQPYADALN
                     KKLINSPFTQRLDQRKYFTYLRNVRKSIELFREENIPVQAELSVMQQKYGVITGAMTV
                     EVNGQEYTLQQAAKFLQDHDRNLREQVWRKVMERRQQDKDALNDLYSQLIEKRDQIAK
                     NAGFENYRDYKFAEMGRFDYTKEDCFQFHEAVKLHVLPLVEKINLHKKEKLGLDVLRP
                     WDTEAEPENVQPLRPFKTGEELLEKTEKC"
BASE COUNT         2818 a         2082 c         2205 g         2625 t
ORIGIN      
        1 ttatgcagaa cgaatacagg gcaggcaggt gttgatagaa gataacgata aatacattct
       61 aacgcatgtt ccggctacga cttatacgca aaacctggat tcagaaaagc gggtcttaac
      121 ggtgcaggga agcaacctta cgggcacagt gtccaatgaa tggaaaggag aagaaaagga
      181 aaatattttg tatcacctga acacgacgag gaaagataaa tcggaggacg cgctgaaaaa
      241 atatctttcg gaagataatg gcgactataa gatcaataac ctcgtaactt ctgacataaa
      301 caatattgat ggtgatctga ctgcaacgta tgccttaacg cacaacaatg cggtatcgtc
      361 gttcggtaaa gattattatg ttgatctgga ctttcaaaaa gacctgaacg gcctcgattt
      421 tgattccacg cgggaactcg attatctttt tccttacaaa acacatgttg agcgcatcac
      481 agaactaacg ataccatcgg gatacaagat cacctcgcta cccgcgaatt tgtcgatcaa
      541 taacaatgac tatgattttg aaataaatta tatagaaact gcaggcaagg ttgtatatcg
      601 taagagcatt gctttgaaaa gcacacgcat ttcaaaacag aattttaagc agtggaatgc
      661 cgacgtcgcc aggctcaccg aggcatataa ccagcaactt gtactaactg cacaataata
      721 acttttatga gagggaaatt tctccttacc gggttactag cctttgttgt gatacaactc
      781 gatgcgcaaa aggatgagaa agcataccgg caacgatcac aggaggtcca ggccgagatc
      841 tggaacaatg ctccgcaggc attttctgtg aaaacaatac ctgcagaaat gaacaatgag
      901 agcgctgtca tcatcgccac atccttcaac gttattaata gctcaaaggc gagactgaaa
      961 tttgccgcat taactaccgt acagcggatg ttctatcaaa ctacatttca cgaaagagtt
     1021 aagataaatg acaaagcggc cttagacgat tactccacgc tggaatatca aaagaagtta
     1081 gataaaactg tttcggcttt gttcatcaaa gtttacaata agatggacac ttacgtgggt
     1141 gcgaagatca tcaagccgaa tgggaaagag gttatggtga ataccgatga agaagtatta
     1201 acaaaggacg acaccaggcg gcaggatggt aagatcgcga ttcctgattt gcaggttggc
     1261 gatatacttg actattattt gtgtacagag aaattgcagg aatatgttac ggaggtgcag
     1321 ggcccatata catttttcct cggcggcgat tacccgatat tgtaccaggg gattcgattg
     1381 cagttagacg aaaagagcgg ggtggaatat gtttcggcca atggcgcccc ggcattaaag
     1441 gaaagccgtg acgacgacaa caatattatt ttgtcgatcg aggaaaaaaa tcttcccaaa
     1501 ctgcagacga gtgtatttgc gtcaccgtac aggcaatatc cttatatatc gcttcaatac
     1561 atgtttgtta caaagaaaga cgacgcatca acgcatttca accgcggcga agtgaaacat
     1621 ggttcgttga gcgacgatct tcttacccag tttaaaacga ttttgcaaaa cccgtcaatg
     1681 tcgatcgact attcgcccta tgacattact gcaacttatt tcggcggtga acgggcaatg
     1741 aaggccgtgc ctcaggacag cgtgatcaaa gttttgtaca aagcctggcg ataccagatc
     1801 ttttgttcgt tctcgacgca tgatatcgac atgagtaatg acattaatta tgcaactgca
     1861 aacagcctgt acggagctat cagcatgagc agaatgctgc ggaagatcgg tattgaccac
     1921 gacattgttt tgttgtgccc ccgcacgtca aataagctca aagatgtgat ggagatcggc
     1981 gatttcagtg cgctgatcca cgtaaagcta aagaaggaat actggcttgc tttttatgat
     2041 gtggtaacgc agttcaatga aattcctgta tggttccagg gtgagcaggg cctggtgttc
     2101 aaacccgacg ttgatgcgaa acacttatcg tatgaacaaa gtggcacaat aaaagttccg
     2161 gttgatggtc cggaaaagaa cacacgaaca gagaatataa acgtgggctt tgatgccacc
     2221 ggcatgcagc aattgaaaat agatcgttct acggaactga caggatacat gaggcattac
     2281 acacaaaagg agttaatgct gatggaagac atggaagcgg atcttgcaac cgccgtgaac
     2341 gaaaaaaaat tgacagagcg gctcgcggat gacaaaaagc aaaagaaact tgttgatgaa
     2401 ttcacggctg ccttcgcaca tgagagaacg cgatcaaaat cttatttcga agacgagatc
     2461 aaagaccgtt atgaccagga ggcgaaacag cttgcctcgt atgaggtgga aaagaatggg
     2521 atgttcaacg ctgaattcgc gtaccatacg actttcacca tggacaattt cgtgaagcgt
     2581 gccggaaaca actatattct tgaagccggt aagcttattg gttcattcaa caagctggat
     2641 gaaaaggacc gtacccgcac gatagatgta tatacgccat gcgcgcaaat atgcacctat
     2701 aatgtgactg tgagcattcc gcatggatat aaggtgaagg gcctggaaaa tttcagcaaa
     2761 acccttaaca atgaaacagg ttctttaacg gcttctgcaa tagcggatga tacggccgtt
     2821 catattacga taaaacaatc cttcgcatca aattttgaac ctgcagccaa ctggcccaaa
     2881 cttgttgagc tcatggatgg tttatatgat ctgagcagtc agaagctttt gttggagaaa
     2941 agtaattagc gcaaaaaaag ttacgttata ggatcagctt gttgtttaat cttgtgccac
     3001 atttcttcaa gaacaagatt caccgccaag tttccaaata ggagatatct aatccgttca
     3061 tatacgcgta acgcgtcggt aaattgtttt tcgcttcctc cggagagatt tgcccatcgt
     3121 aacttcgcta atattgtatc ttccagcgtt gatagtttca ttttgaatcc aaatgcattc
     3181 tcttcatatt tcctttgaaa cctgcttttg tcaaaggggt catctcagta tccaaaaatc
     3241 aattttgtca ccttcaatag tatcgagcac attaaacatg cttttgcgtt gaacgtggct
     3301 caccctggag gctagtttaa agcgtcatct gctttgataa cactttttgc ttttgataag
     3361 gacacgacgc gatgcgagga ctctcattaa ctaaacaagt attctacgtc ttcccttgaa
     3421 aggctcttca caaatgttgc gtcatctgtg atcaactcgg cggcgagcgc acgtttgcgt
     3481 tcctggagtt ttaggatctt gtcttcaaca gtgtctttgc agatcatccg gtaagcaaaa
     3541 atatttttgg tctgtccaat tcgatgtgta cgatctatcg cctgctgctc tactgcggga
     3601 ttccaccagg gatccacgat atatacataa tctgcagcag taaggtttaa acctacgcca
     3661 ccggctttta aagaaattaa gaagacacga cagttgtcat cattttgaaa acgctggata
     3721 gctttttcgc gatcgggagc ggaagtgctg ccgtcgaaat attcataatc aatttccaat
     3781 tccttcatgc gctcttttat caatgcgagc atgcccaaaa attgagaaaa gatcagtgct
     3841 ttgtgatcgc cgatgttttc agatatttcc ctgccaagtt cttccagctt tacagataca
     3901 ttcggatatt gttcctcctc tttgataatg gccggactat cgcatatctg ccggagcttc
     3961 atcaatccct gaaggatcgt gagctgtgat ttctgcacac ccttatcatc tacggtaccg
     4021 aggatcttat cgcgataatc gtttcgatat gcatcataga tcttccgctg ttcatcgctc
     4081 atttcgcaga agaggatcat ctcgctcttt tcaggaagat ctttcgccac ctgctccttt
     4141 gtccttctta aaataaatgg atataaaagt ttgcgcaaat ggtccttctg ttccttctct
     4201 ccaaacttat cgatcggtat tgcgaattcc tgccggaaga attccatact gccaagcatt
     4261 ccaggattca aaaaattcat ctgcgcatac atatcgaatg tattattctg tagcggtgta
     4321 ccgctcatgc ataagcgcgt tttagcattc aacaggccgg cagcttttgt tactttgctc
     4381 tgcggatttt ttatggcctg gctttcatcg aggatcacat aatcgaatac agaagcagta
     4441 agaagctgaa tgtcgctgcg caatgtgcca tacgtggtga tgatgatgtc ggcgttctca
     4501 tactgtacag tttgttgtga tcttccgctt ccatgatgaa tgagccaggt aagcgagggc
     4561 gtaaattttt ttatttcatt ctcccagttg tacatcagtg ttgtgggaca tacaaccagc
     4621 gcccgcaacg atccgtttac ctctttcgag tgatgaagga acgataatgc ctgcaccgtt
     4681 ttccccaggc ccatatcatc tgcaagaatt ccgccccaat taacttcatt caaataattc
     4741 agccaatgaa agccggagac ctggtatgga cgcaaaacgg ttctcaggtg cgaaggaggt
     4801 tcgatctccc gtattgtgtg gtgctccttc aaacgctcat atttcttttc cagttgaaaa
     4861 aataactctt cctcattacg ctgctggtac aattcctcga taactccgaa atgatatttg
     4921 cttagtttga tattggttgt ctttccttct cctacgcgaa acagcatcga gtatttcctt
     4981 atccagtctt ccggcaaaat accaagtgtt ccatcctgca gcggaacaaa ttgctgctta
     5041 ttcgctaaag ctttttttac atcagctacg gtaatttttt gatcgccgaa atgaatatcg
     5101 atttttgcgt cgaaccaatc ggtattactg ctaatgaaaa ttttagttgt tggtttggcc
     5161 gtgttgaaac ggaatttttt caatgcatca aatccgtaca cagggatgtt catttccttc
     5221 atcgtgtcgg cgaacaaaaa gaaccagttg ttttttaaaa catcagttcc ttttaatgca
     5281 agcgtgtctg aattgtcagg ccgtataaat gacgaatgaa gattctcgat ctttctaacc
     5341 aactccattt cggcctgggc atttctatga atgatgataa gcttgccggc agacggaata
     5401 atgatgcgtt ctttatcgcg ttgctttaca tcgtaaccgt tgtaattaaa atagggctga
     5461 aataaaagat aatctccctt ttccttcaac aggatcctga tatcaggcct gatgtttttt
     5521 atctcttctt tgcgtatccc gttaaactga acgtcgtagg tttttgttag cggcaagata
     5581 aattccagca actggtgatt ccagtcttgt tctgtgataa caatctttcc attcgccagg
     5641 aaccgctctg caagcaacga atcttctgca ttctgccaga gatagaaagt gttcgctgat
     5701 tgaagtatga aaggagaagc gataacattt tcttcaaccg gtaccactgc atcgatgagc
     5761 tttgcgaaac accttacctc gtaaacattt tcgttataag aaacaacgaa ttgaggttgt
     5821 atgtaatgat ttgaaaaggc ggcctgttgc aggttgccgg taacaaacgg cttccggtaa
     5881 ggcagcgtat acacaaattc gctttcactc aactcagaaa ataatttctt gtatttcggc
     5941 aacaggtatt cgatgatcag gtggcgggtt tcctccggaa gctcgtcatt gtgctgctgg
     6001 ataatatttt cccatatacc gctgaatggc gagttgcggt tgagataccg ggttacttcg
     6061 gctggcaaaa gttttcgaac atgctgaatg agcattttat cgtcctcatc aagatcttcc
     6121 gtgttcacaa attttgtaag gtccaatctt tctactttcc cggtgaattc cttgtttgca
     6181 taatcggcct cacctttaac cacatcaacc tgtgcatacg gatattgctg gtcatcatat
     6241 cggagcacga aacccaactt ctgacgtggg aacacttcag ccggcttctc ctcaacctgc
     6301 gtttccttct gcaccgggac aaaaaatggt tttcgttgct caaccggcgg ggcaattacg
     6361 cgtttaatcg acggatcaag tacgcgcagg aatggttttc cctcgcgata cgtgaattca
     6421 aattttcctt caatatcatc gtcggtcgtg taaccatata aagccagtaa tttatttttt
     6481 tcccggtcgc ggttgcttat actgtcgaaa tacgttgggc cgtagctcgt gagaagctga
     6541 agaaaaagga tcgtcttgtg caggcacagt gggtgcttag tttcggatgt gcaattgcag
     6601 ctcgtatcaa aagtgcggtc gtcattgcgc cggatctgca gcaaataatc ccgtccttca
     6661 tacgtcattt cagcttttac gaggtcgtta gctgcttcaa ggatatttgc cttatgactg
     6721 cgtaaataat cttccgcagc aggcaggata tcaggcgccg aaagcaactt taaagaccgt
     6781 atttccagct gcttcatttt tattacagta tgctgctggt tgaattcagt gtcggtttca
     6841 cccagttgat tactgtcaac caattcctgt aaacgaaata gtgcagccgc ttcgtgccgg
     6901 catatatcac ccaggttgta agggcaactg cacctgacag agatcgcctg cagatcgtta
     6961 taccggctaa tataaatctt gtaaaaggtg ttgtaagcat catccctcac gcggaagact
     7021 atcgagccaa gcaactcatc agtttcgatg acctcaacat atcccaggga aaagatcttt
     7081 tttccgcgcc gtattacttc atctgtgccg ttattgtata tatattttat taagtgcgga
     7141 agagccaagc taatgtgcga tttacgtttc tgcctggctg cgtcgtgcag gcaggggatt
     7201 taaaaaagtt tcagaatccg gttctgaaaa aagcaagtag caaaaatact tcattgcacc
     7261 gaacaataaa acgcggagtg aaaacgaagc atgaaatgat tgttaataat tagcgattag
     7321 cgcgccttca cggtatactg gaagaacgtc ggccacatcc ggactaacgc aatactgcag
     7381 gtctttttcc aacccgtagg atgcgagccg gtgccagtga gtggtttttt gaacgaactc
     7441 gtagaggtca tctttgtgga ggcaatacat gtcttccgcc atcaggctgc tgtcgcaatg
     7501 aacagtgaat tggtgtttga tacgatggat gactgcgccg gcgaaaagag tatcttccat
     7561 gttgaacctg tccttccagg ccgaacatcc aaggatgatg tttttgcggg cagccagcag
     7621 gtgattgcaa accgatgtta agtttggaaa ggaaccggtt atcacttgtg acgcgccttt
     7681 gttcaatgcc atgtgaagta acctcgttcc gtttgttgtg gtgagcacca gcgtttgtcc
     7741 ttcaacaaac gaacggaaat attctgccgg ggaattacca tgttgaagtc cttcgataat
     7801 tttcccgtca cgttcgccgg cggtgatcgc atttaatttt gttccaagat cgatgcagtc
     7861 ctgcacatcg gcaacgggga tcactttttc agcgccgtta tacaaggcgg tagcaatggt
     7921 cgaggtagcg cgaaacacat cgatgatcac aacgatactt tcagaaacgt catagagatc
     7981 taatagtcgc ggggaaagca gcgtgtgcag agatggcttt tgcggcatgg tcgcaaaggt
     8041 acgtgggtaa attgtttact ctgcctgcag tttaagcatt cagtaacttc atttctgtta
     8101 tcttgcaaac cttaaaaatt tttgcatgga atacaccaaa ctcatatctg ttaccggttt
     8161 aagcgggtta tttgaattga tcgcgagtaa aggagacggc gctattgttc gctcccttga
     8221 agataacagc acccgtttcg tttcttcgcg tacccacaac ttttctcata tcgaaagcat
     8281 tgaagtttac acaggcggtg ataacgtgaa tctcgctgat gtgttccatg ttatggaaga
     8341 aagtaaagaa cctttgccgt ctgaaaagga cggggccgcg gtaaaaaaat atttcgagaa
     8401 ggtgtacccg gatatggatt tcgaacgcgt atacacaagc gatatgaaaa aaatggtgcg
     8461 ctggttcgat gtgctgaaga agaataatgt agagatcaaa ctgagcgacg aggacgaaaa
     8521 aggaactgta gacggcgaag aaaagaagga gagcaccgaa gaggaaaata acgccgctgc
     8581 aataagttct gagatcggcg tggatacaga gaaagaaaag aaaattgaaa gtgaagttcc
     8641 caccggctcg ctgaaaagag acgctgccaa aaagaaatct gaaacggagg gcgccaggga
     8701 aaaaatcaca aaaaaataaa ttgctaccgc agtcatgcgg gtaacaaaga agtgttgatt
     8761 agactgtctt gaaatagaat ctcgctttac ccggatggca ccttaaactt ttgcgatgga
     8821 attaaccgca gacattaaaa aaatagaaag acactatatc ccaaacgatt ttacggtaac
     8881 gacatgggaa gcactcgaac cattttttaa agagttactc gaaagaagca ttgcgtcgga
     8941 acaagatctt gaacgatgga tgcgagacat gagtgaactg gaggcggttg taagtgaaga
     9001 tgcatgctgg cgccagatcc ggatgacgtg cgacaccaca aataaatcgc tggaagaagc
     9061 tttcacttat ttctgcatgg agatccagcc gaaattgcaa ccgtacgccg acgcgttgaa
     9121 caagaaactc attaactctc ctttcaccca aagactcgac cagcgaaaat attttacgta
     9181 cctgcgcaac gtgagaaaga gcatcgaact gtttcgcgaa gaaaacatcc cggtgcaggc
     9241 cgagttgagc gtaatgcagc agaagtacgg ggtgataaca ggtgcgatga cggtggaagt
     9301 aaacggccag gaatacacat tacaacaggc agcaaaattt ctgcaggatc atgaccgtaa
     9361 cctgcgtgag caagtgtggc ggaaagtgat ggaacggcgg caacaggata aggatgcatt
     9421 gaacgatctg tactcacagc tcatcgaaaa acgggatcaa atagcgaaga atgccggctt
     9481 tgaaaattac cgcgattata agttcgcgga aatgggtcgg tttgattata ccaaagaaga
     9541 ttgcttccag tttcatgaag cagtaaagtt gcatgtgctg cctcttgtgg aaaagatcaa
     9601 ccttcacaaa aaagagaaac ttggattgga tgttctccga ccatgggata ctgaagcgga
     9661 gccggaaaat gtgcaaccac tccgtccttt taagacaggt gaagaactcc tcgaaaaaac
     9721 agaaaaatgt
//
LOCUS       DASQJI010000410         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_815991,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000410 DASQJI010000000
VERSION     DASQJI010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815991"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1221
                     /gene="glnS"
                     /locus_tag="VEV83_11620"
     CDS             <1..1221
                     /gene="glnS"
                     /locus_tag="VEV83_11620"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HYK45812.1"
                     /translation="TIEENLRLFSEMKAGKYPDGERVLRAKIDMAHPNMLMRDPVLYR
                     IKHAHHHRTGDDWCIYPMYDFAHGQSDSIEKITHSICTLEFVPHRDLYDWFIEKLEIF
                     PSRQYEFARRNLSYTVMSKRKLLQLVNEGYVEGWDDPRMPTISAYRRRGYTAAAIRDF
                     CERVGIAKRENVADLSLLEFCVREDLNKIAMRRMVVFDPVKVVITNYTTEGEYVPIED
                     NPEDVNGGFRDVPFSKELYIEREDFMEDPPKKYFRLFPGGMVRLKGAYIIRCDEVVKG
                     ETGNITEVRCTYFPESRSGHDASNIKVKGTLHWVSIPHAITVEARLYDRLFKVEDPSS
                     EEGNFKDYINPDSLQIVPAVYAEPALKNAKFNERYQFLRKGYFILDKETNEEKMIFNR
                     TVTLKDTWEKEKKK"
     gene            1285..>2421
                     /gene="tilS"
                     /locus_tag="VEV83_11625"
     CDS             1285..>2421
                     /gene="tilS"
                     /locus_tag="VEV83_11625"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HYK45813.1"
                     /translation="MMNLLERFQQNWKDNFHHLSTANCHLVLAVSGGLDSVVLMDLIS
                     KTGFNFCIAHCNFQLRGDESERDEQFVRSLATKYNKEIFVKSFNTKSYAEEKKLSIQE
                     AARELRYTWFFELITSNLKPQTSNFVLTAHHADDNIETMLMFFFRGTGIHGLTGIPVY
                     DKKRKLIRPLLFAAREDILAYANDNNLKWVEDSSNTSDKYTRNFFRNELLPAIGTHFP
                     QAKDNLQRNISRFADAAELYRQAIQLQKKKLLEIKGNEVHIPVLKLQRAEPLDTIIWE
                     IIREYGFHAHQVPEIKKLFTAENSSYVQSTSHRIIRNRKWLIIAPNAATEADLILIEA
                     DTKAIELNNGTLSLEVITTSNGQAQTSNFKHQTSNLSAHLDAKLI"
BASE COUNT          760 a          500 c          555 g          606 t
ORIGIN      
        1 accattgaag aaaatctccg tttattttcg gaaatgaagg caggcaaata ccccgacggt
       61 gaacgtgtgt tgcgcgctaa gatcgatatg gcacatccaa acatgttaat gcgcgatccc
      121 gtgttgtacc gcattaagca cgcccatcat caccgcaccg gcgatgattg gtgcatttac
      181 ccgatgtatg attttgcaca tggacaaagt gattccatag aaaaaattac gcacagcatc
      241 tgcacgctcg aatttgtacc gcatcgcgac ttgtatgatt ggtttattga gaagcttgaa
      301 atatttccgt cgcgacagta cgaatttgca cgacgcaatc tgagttacac tgtaatgagc
      361 aaacgcaaat tgttgcagct tgtgaatgaa ggatatgttg aaggctggga tgacccgcgc
      421 atgcccacca tcagcgcata cagacggcgt ggatacactg ccgcagcgat cagggatttt
      481 tgcgagcggg tcggtatcgc gaaacgggaa aacgttgcag atctcagcct gctggaattt
      541 tgtgtgagag aagatctgaa taagatcgcg atgcgaagga tggttgtatt cgacccggtg
      601 aaagttgtga tcacgaatta tacaactgaa ggcgaatatg taccgatcga agataaccca
      661 gaggatgtta acggtggttt cagggatgtg ccttttagta aagagttgta catcgagcgg
      721 gaagatttta tggaagatcc accgaaaaaa tatttccgtc tttttccggg cggaatggta
      781 cgtttaaagg gcgcttacat tatacgttgc gatgaagtgg tgaaaggtga gaccggcaac
      841 atcacggaag tcagatgcac atattttccg gaaagcagaa gcggccatga tgcctcaaac
      901 ataaaagtta agggaacgct gcattgggta agcataccac atgctattac tgtcgaagcg
      961 cgtttgtatg acaggctgtt caaagttgaa gatccgtcca gtgaagaggg aaatttcaaa
     1021 gattacatca accccgattc gctgcagatt gtgccggcgg tctacgcgga acctgctttg
     1081 aaaaatgcaa agttcaatga acgctatcaa ttccttagaa aaggctattt tattttggat
     1141 aaagagacga acgaagagaa aatgatcttc aaccgaacgg ttacgttaaa ggacacatgg
     1201 gagaaggaga agaagaagta ggaattggga attagcaatt aggatttggt gtcttcaatg
     1261 cgctaactga ctgccatcaa ttgaatgatg aacttgttag aacgatttca acaaaattgg
     1321 aaggacaatt tccatcatct gtcaactgcc aactgtcacc ttgtgctcgc agtcagtggt
     1381 ggtttagaca gtgtagtcct gatggatctg atttccaaaa ccggcttcaa cttttgtatt
     1441 gcacactgta attttcagtt acggggcgac gagagtgaaa gagacgagca atttgtaaga
     1501 agccttgcaa caaagtacaa caaggaaatt tttgtaaaaa gttttaatac aaaatcgtac
     1561 gctgaagaaa agaaattgtc catccaggaa gccgcaagag aactccgtta cacatggttc
     1621 tttgaactga taacgtcaaa cctcaagcct caaacttcaa actttgtctt aacagcccat
     1681 catgctgatg ataatattga aacgatgctg atgtttttct tccgcggcac gggtattcat
     1741 ggtttaaccg gaattccggt gtacgacaaa aaaagaaaac taatcaggcc actactcttc
     1801 gctgccaggg aagatatttt agcatacgca aatgataata accttaagtg ggtggaagat
     1861 tcatccaaca cttcagataa atacacgaga aattttttca gaaatgaatt gttgcccgcg
     1921 atcggaacac attttcctca ggcaaaagac aacctgcagc gaaatattag tcgctttgcc
     1981 gatgctgccg aattatatcg acaggcaatc caattacaaa aaaagaaact gctggaaatt
     2041 aagggcaatg aggttcatat tccggttctg aaactgcagc gtgccgaacc gctggacaca
     2101 attatttggg agatcattag ggaatatggt tttcatgctc accaggtgcc cgagattaaa
     2161 aaattattta ccgcagagaa cagcagttac gtgcaatcaa cttctcaccg gataattcga
     2221 aatcgcaagt ggctgatcat cgcgcccaac gctgccactg aagccgatct cattttaatt
     2281 gaagctgaca caaaagctat cgaacttaat aacggaacgc tatctcttga agtaatcaca
     2341 acttcaaacg ggcaggctca aacatcaaac ttcaaacatc aaacttcaaa cttatccgca
     2401 cacctcgacg cgaaacttat c
//
LOCUS       DASQJI010000411         5435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1582861,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000411 DASQJI010000000
VERSION     DASQJI010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5435
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582861"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..591
                     /locus_tag="VEV83_11630"
     CDS             151..591
                     /locus_tag="VEV83_11630"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45814.1"
                     /translation="MKRPKVILLVENDMEHQALFMEAIGEIENASLIAITNNGRQALN
                     RLNNHLTLPDIIFMDIDMPVMNGLECLAEIIKTPELRHIPVVILSTDTCQEDFLYKLG
                     AKALIKKTGDYKMLRTQLELLINSGFIAESHATGQTFQTRLLAS"
     gene            702..1739
                     /locus_tag="VEV83_11635"
     CDS             702..1739
                     /locus_tag="VEV83_11635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HYK45815.1"
                     /translation="MKALVYHGPGKKEWAEKPKPLIIEQTDALIKISKTTICGTDLHI
                     LKGDVPEVTDGRILGHEGTGTVEEVGSAVTGFKKGDRVLISCISSCGKCEYCKKGMYS
                     HCEKGGWILGHLIDGTQAEYVRIPFADNSLYHIPENADEEAIVMLSDILPTGLECGVL
                     NGHVKPGDTVAIVGAGPIGLAVLITAQFYTPAEIIMIDIDDNRLNVAKTFGATQTINS
                     SNENAFEKIMDLTGKKGVDVAIEAVGIPQTFELCESIIAPGGHIANVGVHGKSVNLHL
                     ETLWSKNITITTRLVDTVSTPMLLKTVTSKKLDPSKLITHRFALKDILNAYDTFQNAA
                     REKTLKVILTA"
     gene            complement(2089..2307)
                     /locus_tag="VEV83_11640"
     CDS             complement(2089..2307)
                     /locus_tag="VEV83_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45816.1"
                     /translation="MKKEEKILAVNNQEDEDFEGYTLYPENAIDDSNMNKRIKKNNPD
                     HKTAEPITDKSHRPTDIFPLTIVRNTDK"
     gene            complement(2382..2549)
                     /locus_tag="VEV83_11645"
     CDS             complement(2382..2549)
                     /locus_tag="VEV83_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45817.1"
                     /translation="MLQNSLNKLYYSQIEALRAGPMGKLKEEHMNYATSSMQLYNIYP
                     TEFPEIAQYRF"
     gene            2653..2979
                     /locus_tag="VEV83_11650"
     CDS             2653..2979
                     /locus_tag="VEV83_11650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45818.1"
                     /translation="MSGVLFDLRKRGFSYTFKLKDDCIYCSEYELQFAEFDILEIHCF
                     EHADPGEYPVLYAIDCRSYNIKGVIVKAPGIYTDDVFSRICIDKILNNEQFRYEYHGK
                     RKASTC"
     gene            3247..3921
                     /locus_tag="VEV83_11655"
     CDS             3247..3921
                     /locus_tag="VEV83_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45819.1"
                     /translation="MKKNITLTVVLAGFVITAAAQSSFTTINYKEKVQPALTIQLPNT
                     TEVAQGTILQKLKETGYDPQTKGMFFWKTNHPNDFYVFNNVQLPELNNQKLDLYFKVA
                     KATTGIKEQSTVYLMVSKGYDNFVSPETDTATFYAAQKFLNGFVAGTDAFKYNSDIDI
                     QQAHVADAEKKLSDLQHKEKDLSNKIAQLQSDLANNQNDQKNQQSEIESQKARLELMK
                     TKPVNK"
     gene            4074..4640
                     /locus_tag="VEV83_11660"
     CDS             4074..4640
                     /locus_tag="VEV83_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK45820.1"
                     /translation="MKLYVRYMVSIRCKMVVKAELEKLGIKYSSVELGEVELPENISS
                     EQLNTLDLALKKSGLELMDDKKSILIEKIKKVIIEMVHYDDDEEQRVNFSDYLAEKLN
                     YNYTYLANLFSEVQGTTIEHFVILNKVEKVKELLVYNELNLTEIAWKMRYSSVAHLSN
                     QFKKVTGLSPSHFKKLKQKRRDTLEGLG"
     gene            complement(4748..5011)
                     /locus_tag="VEV83_11665"
     CDS             complement(4748..5011)
                     /locus_tag="VEV83_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45821.1"
                     /translation="MKGGFDTIATHSIYAQRSRILSLTTTTNSDYMYSKIFQNSDIDS
                     LETEIDVFLKDLEDITGQIINLKMFSHGGQTTVLIVYSCWKKL"
BASE COUNT         1784 a         1043 c         1073 g         1535 t
ORIGIN      
        1 gacagataac aaagtttaca gggttcaggt aatgaaacag tagatgcgaa aaatttctcg
       61 gtatttatga aaaggagctc aatgcgagct accatttcaa gaatgattct acgattatcg
      121 aaagtagtcg cgtaattaac aagttgatgc atgaagagac caaaggttat cttattagtt
      181 gaaaatgata tggagcacca ggccttattt atggaagcta ttggcgaaat agaaaatgca
      241 tcgttgattg cgataactaa taacggcagg caggctctca acaggctgaa taatcatctc
      301 acgcttccgg atatcatttt tatggacatt gatatgccgg tgatgaatgg acttgaatgt
      361 ttggcagaaa taataaaaac gccggagcta agacacatac cggttgtcat tctttcaacc
      421 gatacctgcc aggaagactt tctttataaa ctgggtgcaa aagccctaat taaaaaaacg
      481 ggcgattata aaatgctgcg aacgcaactt gagcttctga tcaactcagg ctttattgct
      541 gagagtcacg cgacaggcca aacttttcaa acccggcttt tagcatcctg agttcaaagg
      601 attagtgcaa aatttattgt tcctgagatt taagtggtca tttctaaagt gcctgacatc
      661 tttattcttc gtaacataat tcaacaaaaa aataataaaa aatgaaagct ttagtttatc
      721 atggtcccgg taaaaaagaa tgggcagaaa aaccaaaacc gctaattatt gagcagaccg
      781 acgcgcttat aaaaatttca aaaactacta tctgcggaac tgacctgcac atcctgaaag
      841 gcgatgtacc cgaagtcacc gatggccgta ttttaggaca cgaaggcaca ggcacagttg
      901 aagaagtcgg cagcgctgtt acgggattta aaaaaggcga tcgtgtttta atatcctgta
      961 tctcttcctg tggtaagtgc gaatattgca agaaaggaat gtattctcat tgcgaaaaag
     1021 gaggatggat attgggccac ttgatcgatg gtacccaggc tgagtatgta agaatcccct
     1081 ttgcggataa cagtctctat cacatacctg aaaatgccga tgaagaggca atagtaatgt
     1141 taagtgacat tttaccgact ggcctggaat gcggtgtttt gaacggacac gtaaagccag
     1201 gcgataccgt ggcaattgta ggtgcaggtc caattggttt ggcagtgctg atcacggccc
     1261 aattttacac gccggcagaa atcatcatga tcgatattga tgacaatcgt ttgaatgtcg
     1321 ccaaaacttt tggagccact caaaccatta acagcagtaa tgaaaatgct tttgaaaaaa
     1381 taatggatct gactggaaaa aaaggggttg acgtagctat tgaagcggtt ggtattcctc
     1441 aaacatttga attgtgcgaa tcaattatag caccgggagg gcatattgcc aatgttggtg
     1501 ttcatggtaa aagtgttaac ctgcaccttg aaacattatg gtcaaagaac attactatta
     1561 cgacacgtct tgtggatacg gtaagtactc ccatgttact aaaaacggtt acttccaaaa
     1621 aattagatcc gtccaaactc atcacgcatc gtttcgcatt gaaagatata ctgaacgcgt
     1681 acgatacatt tcagaatgca gcaagagaaa aaaccttaaa ggttattttg acggcttaaa
     1741 aaaagaataa taaatcgatt gcaaatcgat ggcgaaacca tacgcaacgc acgtttacgt
     1801 atgcccacga aaccaattga tgcccaaata tcactgcatt caaggatatt cgaataccct
     1861 cctcttgaga atgtacttat tatggaaagc gaccccttta ccgaaataaa tgccctaaaa
     1921 ttcctgctcc tttgcattta atggaaagca tggattactg ggaaaacaca tgagcattga
     1981 aacccttctg aatccaagcg tgacggatat cgacttcctt tgaattttcc gcaagtaatt
     2041 cgtacaaaaa ttaagaatta aactaaacga atttgtaatt gcaaaggatc atttgtcggt
     2101 gttccgaacg atagtaagcg ggaaaatatc tgtaggcctg tgagacttat cagtaattgg
     2161 ttctgctgtt ttatgatccg gattattttt ctttatccgt ttgttcatgt ttgaatcgtc
     2221 aattgcgttt tccggatata atgtgtatcc ttcgaaatcc tcatcttcct ggttgtttac
     2281 agcaagtatt ttttcttcct ttttcatgac ctttttttta aacaatagcg ccttcgcaaa
     2341 atttcgcggc atccacctca tctgttgtaa gcaaatattt ttcagaatct atactgtgca
     2401 atttccggaa attcagttgg ataaatgtta tacaattgca tagaagaagt tgcataattc
     2461 atatgttcct ctttcaattt acccatcggg ccggcccgca acgcttctat ctgtgaataa
     2521 tacaacttat tgagagaatt ctgtaacatt tcaaatttaa aacctacgga gctttactac
     2581 tggaaaggtt caaattgatt gtaactatta aaagcgggct atgaaaaacg ttcgttataa
     2641 aaattcaaac ctgtgagcgg agtactattt gatttgagaa aacggggctt ttcctatact
     2701 ttcaagctga aagatgattg catttattgc agtgaatatg agcttcagtt tgccgagttt
     2761 gatattttgg aaatccattg ttttgaacac gccgacccgg gcgagtaccc ggtcctatac
     2821 gctatcgact gcaggagcta taatattaaa ggagtaattg taaaggctcc cggtatttat
     2881 acagatgatg tattctcacg tatatgcatt gacaaaatat tgaacaacga acaattcaga
     2941 tatgaatatc acggcaaaag gaaagcgagt acctgttaga ttttatttat aagaaaagac
     3001 aaccaggaat cccgatcatt ccgaaaaatt ttgaaagaaa acgaccaatc cttgatgcgc
     3061 tcgtcctaaa acaacattcg taaactgcca ggtaagtcgt aatgacctca ctatagtaac
     3121 gcctgctaaa tgtgtgaatt atgtaacata ttttcagggt tgtgtaacaa ccacggcatg
     3181 cattagcgta acttcacaat tccttccctt gtttctcgcg gctgtttaaa tcactaaaaa
     3241 attaaaatga aaaaaaatat cacacttaca gtggtgctgg ccggctttgt aattactgcc
     3301 gctgcacaat catcgtttac aacaattaac tataaagaga aagttcaacc ggctctaacc
     3361 atacagcttc caaacactac agaagttgcc cagggcacta tactgcaaaa actgaaagaa
     3421 acaggatatg atcctcaaac aaagggaatg ttcttttgga aaacgaatca ccctaatgac
     3481 ttttacgttt ttaataacgt gcagttgcct gaattaaaca accagaaact ggacctgtat
     3541 tttaaagttg ctaaggcaac gactggcatt aaagaacaat caaccgtata cctgatggta
     3601 agcaaaggat atgacaactt cgtttccccc gaaacagata ctgccacttt ttatgcagca
     3661 cagaaattcc tcaatggatt tgttgcaggc actgatgcct tcaaatataa ttctgatatc
     3721 gatatacagc aggcccatgt tgcagatgca gaaaaaaaat tgagtgatct tcagcacaag
     3781 gaaaaagatc taagcaataa gatcgcccag ttgcaatctg atttggccaa taatcaaaat
     3841 gatcagaaaa accagcaaag tgagatagaa agtcaaaagg ccaggctcga attaatgaaa
     3901 acgaaaccgg tcaataaata atttgttgca cgaaagatta ggcgtctttg cctctttagg
     3961 atcctcgctc actcctgccc tgtccgcgat gggcaacctg cgggcagcaa cgatcaactt
     4021 gaaaaatcta aagagcgcta cactttggtt ttttgttcta tattagagta ccaatgaaac
     4081 tctacgttag atacatggtg agcatccgct gcaagatggt tgtaaaggca gagctggaaa
     4141 aactcggtat taaatactcg tcggtggaac taggcgaagt ggaattaccc gaaaacatat
     4201 catctgaaca actcaacacc ttagaccttg cattaaaaaa atcaggcctg gaattaatgg
     4261 acgataaaaa aagcatattg atagaaaaaa taaagaaagt aattatagaa atggtccatt
     4321 atgacgatga cgaggaacaa cgagtgaatt tttctgacta tttagcggaa aaacttaact
     4381 ataactatac atatctcgcc aacctgtttt cagaggtaca gggaactact attgaacatt
     4441 tcgtcatact gaataaggtt gaaaaagtta aagagctgct tgtttacaat gaactaaatc
     4501 ttacagagat tgcctggaag atgcgttata gcagtgtagc gcatttatca aatcaattta
     4561 aaaaagtaac tggcctttct ccttcccact tcaaaaaatt aaaacaaaag cgacgcgata
     4621 cacttgaagg tttgggataa ctgtttactg aatcctaaag aacgtttgct tgtatttcgt
     4681 atccctttat agccgtaaca aaagcggagc ttaccagatt gcagattctt agcagctgcg
     4741 gtcgtctcta taattttttc cagcaactat atacgatcag caccgttgtt tgtccgccgt
     4801 ggctaaacat ttttaagttg atgatctgcc cggtgatatc ttcaagatct tttaagaata
     4861 catcgatctc cgtttccagg gaatcgatat cggaattttg gaaaattttg ctgtacatat
     4921 aatcggagtt ggttgtagtt gttagtgata aaatgcgcga ccgttgtgcg taaatggaat
     4981 gcgttgctat cgtgtcaaat ccgcctttca aatataagtt tggacaccac tgttgcatcc
     5041 aggtttgtaa agtagtactt taaaacggtg gctgccgata ggtatttaat tgcatgaaat
     5101 gttattatat ctgttggcta ttttttgttt agaaaaatga cagccgatca atttcagttc
     5161 tttcagccag tccacgaaag acaccggaat gttatcaata agcacctcat gcaatataat
     5221 cctattacct cagaaccggg gataaatttc aattggataa tttaacaaag tgtctcgcat
     5281 gtctacgcca acacaaacgc aaatatgaaa tagccccaac aaataaattg tttcaacaac
     5341 gacgttgata tgacgtgcgt tattggttta ttccggaaaa caaaatgaaa agcggaactt
     5401 tatcaagcgc cggttggcga tgtaccaacc gataa
//
LOCUS       DASQJI010000412         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1121260,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000412 DASQJI010000000
VERSION     DASQJI010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121260"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VEV83_11670"
     CDS             complement(<1..753)
                     /locus_tag="VEV83_11670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45822.1"
                     /translation="MKKTLLIFAAILTVTASFAQTKHKIKVSNFQFSPATTNAVVGDI
                     IIFVWVSGTHTTTSTSVPVGAKPWDTAMDINHPKFKYKIKVAGTYNFHCNIHPLSMTG
                     KIIVSSPLDAAMGTFALNWENAKAVLTWNTDKATDASYFSIQRSLDGSNFTEIAKVQP
                     TSSNNYKYTDQTSAPSKYVYYQLQLVQKSGNTQLSDIKMLTNPGAVSKLITSISPNPI
                     SSPGHLMLQFNADKEGKMLVQLYNSAGELVKQT"
     gene            964..>2043
                     /locus_tag="VEV83_11675"
     CDS             964..>2043
                     /locus_tag="VEV83_11675"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HYK45823.1"
                     /translation="MRTLIMSIAGSLLCAMSFAQTTVTGKIIDEQTGTPIAGATVMVT
                     GEKIATQSLPDGSFSIVASGAAKTITVSFIGYVDKVMQITSGTMTIPLNQTSKALNEV
                     VVVGYGTSTKRKLTGNIAKVQGADIENIPVPNFTQTLQGRAAGVFVESESGKVGEGVK
                     IRIRGTGSFAASNDPLYVVDGIPINSNNTYSGNALADINFNDIESFDILKDAAAKAIY
                     GSRGSNGVVLITTKKGRAGKTSFEVNTQYGFNRPTHLRGFLNAPQYVELLLEAAHNSD
                     DIDGYDYNDPDSWTVYAEQTMDDISGYADWRTGEINTDWQKLAFNYDAHTYSTNVSAS
                     GGTDKTKFYASANYDNQDGIVIGNHF"
BASE COUNT          571 a          418 c          479 g          575 t
ORIGIN      
        1 tgtttgcttg accaattcgc cagctgaatt gtaaagctgc acaagcattt ttccttcttt
       61 atctgcattg aattgcagca tcaaatgtcc cgggctgcta atcgggttcg gacttatgct
      121 ggtaattagt tttgaaactg cgcccgggtt cgtcagcatc ttaatatcgc tcaattgtgt
      181 attcccgctc ttctgcacta attgaagctg gtaataaaca tatttactag gcgcgcttgt
      241 ttgatctgtg tatttgtaat tattcgacga cgtcggctgc acttttgcga tctcagtaaa
      301 attggagccg tctaaactcc tttgtattga gaaataggaa gcgtctgttg ctttatcggt
      361 gttccaggtc agaacggcct ttgcgttttc ccaattgaga gcaaatgttc ccatggctgc
      421 atcaagcggg ctgctgacaa ttattttacc ggtcatgctg agtggatgaa tattgcaatg
      481 aaaattataa gtaccggcaa cttttatctt gtacttgaat tttgggtgat ttatatccat
      541 cgcagtgtcc catggcttgg cacccacagg cacgcttgtg gatgtggtag tgtgcgtgcc
      601 gcttacccaa acgaagatta tgatatcgcc cacgacggca ttggtggtcg caggcgagaa
      661 ctgaaagttt gaaaccttta ttttatgttt cgtttgagcg aaacttgcgg taacggttag
      721 tatcgccgca aaaatgagta atgttttttt cataacatgg tttttgtgaa caatgtgtga
      781 tgttgagata ttcaaattaa acagaaaata gaagaaaagg gttgcctttt ttaaattaat
      841 tttcggcgca gatttttgga ggccggattt cgattgttgc taaaaatatt ttggctgatg
      901 tgtcttgtca tagcccggcg cctatatttt tgaaattata attatcacat aaatcaccat
      961 tctatgcgaa cactgatcat gagtattgcg ggttcattgt tgtgtgccat gagcttcgcc
     1021 caaacaacag tcacgggaaa aattattgat gagcagaccg gcacaccaat agccggcgca
     1081 acggttatgg taacaggtga aaaaattgcg acccagtcgc tgcccgacgg aagcttctca
     1141 attgtcgcgt ccggcgcggc gaagaccatc acggtttctt ttatcggtta tgttgacaaa
     1201 gtgatgcaga taacgagcgg cactatgacg atcccactca accagacttc caaagctctg
     1261 aatgaagtag tggtggtggg atatggaaca tcaaccaaaa gaaagcttac aggaaacatc
     1321 gcaaaagtgc aaggggcaga tattgaaaac ataccggtgc ctaacttcac gcaaacgttg
     1381 cagggacgcg ccgccggggt gtttgtagaa tctgaaagcg gcaaagttgg cgaaggcgtg
     1441 aaaatacgga tccggggcac cggctcattc gctgccagca atgatccgtt atatgttgtt
     1501 gacggcattc ccattaacag taataacact tactcaggca atgcgcttgc cgatataaat
     1561 tttaacgaca ttgaatcgtt cgacatttta aaagatgccg ccgcaaaagc gatttacggt
     1621 tcccgtggct caaatggtgt tgtgcttatc acaacgaaaa aaggcagagc tggcaaaaca
     1681 agctttgagg taaatacaca atatggtttc aacaggccta cacatctgcg tggtttttta
     1741 aatgcacccc aatatgtgga attactactt gaggccgcac ataatagcga tgatattgac
     1801 ggatatgatt ataacgatcc tgattcatgg actgtgtacg ccgaacaaac gatggacgac
     1861 atttccggct acgcagattg gcgtacaggc gaaataaata ctgattggca aaagcttgca
     1921 ttcaattatg acgcgcacac gtattctacg aatgtttcgg catccggagg cacagacaaa
     1981 acaaaatttt atgcgagtgc gaattatgat aaccaggacg gaatagtaat aggcaaccat
     2041 ttc
//
LOCUS       DASQJI010000413         7811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1121265,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000413 DASQJI010000000
VERSION     DASQJI010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7811
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121265"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..200)
                     /locus_tag="VEV83_11680"
     CDS             complement(18..200)
                     /locus_tag="VEV83_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45824.1"
                     /translation="MKKEVTQHAPHSAVYGLGFIGAAVYYISNATSFGLGILGFLKAI
                     VWPAFLVYDAFKALNG"
     gene            complement(329..709)
                     /locus_tag="VEV83_11685"
     CDS             complement(329..709)
                     /locus_tag="VEV83_11685"
                     /inference="COORDINATES: protein motif:HMM:NF021525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2255 family protein"
                     /protein_id="HYK45825.1"
                     /translation="MMKKFSRAFLKCVNETQITSVRAGADRTKFTGIWMVVVNGRIFS
                     RSYYGADKSWYTSLLAAEYGEIKCAKDIVAVRGIKPSDLKEITEAINKAYEKKYLTRP
                     SNKKWVDGLNDPERIARTMEFIAT"
     gene            744..1820
                     /locus_tag="VEV83_11690"
     CDS             744..1820
                     /locus_tag="VEV83_11690"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HYK45826.1"
                     /translation="MKLKNTLTEILSVDYPLVQAPMLGVTTPEMVAAISNEGALGSLP
                     IGGLPPTQALALIQKTKQLTNRPFAVNLFANAGPATIDENVWSQMQALIESFCARYGL
                     AYEPQSYEGRKFFSYEDQVEILCSEKISLVSFTFGVLSDDTINALHKQGMLLIGTATS
                     VEEASFLAGKGIDIITAQGIEAGGHRGTFLREDIPQVGLMALLPQIVDAVDKPVLAAG
                     GIADGRAIKAAMILGAAGVVVGSAFIGCDESAANPKYKALLQQGTDTSTTLTKSYTGR
                     WFRVIDNDFIQTVESSGLPVNQFQVQQLLTGFFRGLHQYKNAEKFLPMPAGQNVRKTT
                     AVDAATIVHDLLREAEWVRAEQQS"
     gene            2078..2500
                     /locus_tag="VEV83_11695"
     CDS             2078..2500
                     /locus_tag="VEV83_11695"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK45827.1"
                     /translation="MKHNSPRAAGILFARMLLGIIFLMQGFGKIFMFTVPKVYEMFFK
                     DFESTFLPNWLIWASAYYTSYAEMICGFLLVIGLFRRYAMYLLAADLLIVSFGHGLIE
                     PIWDLSHVMPRAILLILLFLAPPEWDIYHADRMLRKSS"
     gene            2670..3482
                     /locus_tag="VEV83_11700"
     CDS             2670..3482
                     /locus_tag="VEV83_11700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK45828.1"
                     /translation="MKPVSKTAFYCCGVRMQDAESARPVIGDNYAKRLMSDEGLQYWE
                     EFKEFKMPNASNIARAHVIDNYLRELLSARPDSTVILIGAGLDSRAYRITGGSWVEID
                     EPGVIEYKNEKLPVSECENPLVRIPIDFETQKLADKLSNYRNRPNVVIIIEGVLMYLT
                     MPQREALLSILTSLFAVHVVFCDLMTKKFFEKLGQPLHNKIKAHGASFTDMMNDPADL
                     FLRHGYRQLARVPTIKTSIQLGLSKLPKFAFLIAGKLLNGYAVYQFSYHGPS"
     gene            complement(3569..4705)
                     /locus_tag="VEV83_11705"
     CDS             complement(3569..4705)
                     /locus_tag="VEV83_11705"
                     /inference="COORDINATES: protein motif:HMM:NF023695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3616 domain-containing protein"
                     /protein_id="HYK45829.1"
                     /translation="MPQANFALFEFDLQLNQLSNNKKLSEGLSAVVLIGDEVWTANDE
                     TIALERLSCKNSNAGANKTYCQHAHFPLDKYLALPGGVQGEIDIEGLDYRDGYLWLIG
                     SHSLSRKKAKKNDAVEENLKRLSEISKPEEIRNRYLLARIPLVEKDGNRVPEKQTQQN
                     GITKTAAHLRLEDNGNQLTAMLAQDDHLKPFFAIPSKDNGFDIEGLAVTDDGRVFVGL
                     RGPVLRGWAIILELRPEGENNSSVFELKDVDGNAANTTLCRKHFFELGGLGIRDLYID
                     GTDLLILAGPTMDLDGPVSIFRWKEGVKKTGVSFVSANNNNDELKKIIDIPYGSGEDH
                     AEGMTSFSTVAGKTNSLMIVYDLAAKARQTAPANLIADIFELAI"
     gene            complement(4882..6414)
                     /locus_tag="VEV83_11710"
     CDS             complement(4882..6414)
                     /locus_tag="VEV83_11710"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYK45830.1"
                     /translation="MKVFHAVLLLIICCFAVEVSAQTLNDKVKQFVQANKDRMMDEYT
                     SFVSIPNVSADSQNIPLNTAFIQKMMQDKGIESELLHGTTAGVNPAVYGEIKVPGAKR
                     TIAFYAHYDGQPVNPKQWANGLEPFKPVFITNSLEHGGTIVHHEPGDPLNDEWRLTGR
                     GSADDKAGVMTILNAYDALKRSGVTMTNNIKFFFEGEEEVGSPHLDEIFKNNKEKLQA
                     DVWIVVDGPRDVSGKKTIVFGARGYVNMDLTVYGAKRPLHSGNYGNWAPNPAMRLAQL
                     LSGMQDDKGKVLIPGFYDDMVPLTAEEKNAIAAIPDVGGTLKKELGVAAPDGDGKPFL
                     ELLSMPSLNIDGIESANTGKLAANVIPATAEASLNLRLVPGNDMQRQAKKVKDYIESK
                     GYHVIDHDPTDEERALYGYLIKVKIIPGGYVAQRTPMDLPVAQSVIKAVQSTVDYGVL
                     LKPMMGGSLPLFLFETYLNSKPVVMPVVNYDNNQHAENENVQLKFVWEGIGTMAAIMA
                     MN"
     gene            complement(6644..>7811)
                     /locus_tag="VEV83_11715"
     CDS             complement(6644..>7811)
                     /locus_tag="VEV83_11715"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYK45831.1"
                     /translation="HKMATFLETRLQNGSYDSIFDPADFADKLTADLRSIYFDHHLSV
                     HYEPDLYANLNNTTAKQADQAKEEFERAKKANFGFVKVEVLKSNVGFIKFNQFYAVDN
                     YSRETVDAAFKFLDHTNAIIIDLRENIGGEPEMVQLICSYFFDQKVHLNDLFERRTNK
                     TTSFVTTSLPETDLFKNKPLYILTSHGTFSAGEEFAYDLQTLKRAVVVGETTGGGAHP
                     VAPFAITNGFVAFVPYEKAINPVTKTNWEGVGVKPNIETGADSALDVALFHLYDNITK
                     TSKDEQEIASAQWQKNLLGLKLNPAIVDAATLRTYTGNFDGITVSFENDTLYFVTAKG
                     HKSKLIPLSETVMKRSDGDDNDIQIEFVKDQNNAASKIAIHFNDGTSEYFMKKN"
BASE COUNT         2032 a         1767 c         1688 g         2324 t
ORIGIN      
        1 ccaactaaat tttcgcgcta tccattcagt gccttgaaag cgtcatacac aagaaacgct
       61 ggccatacaa tcgctttaag aaaaccgaga atgccaaggc caaagcttgt tgcattggag
      121 atgtaataaa cggcggcacc aataaatccc aacccgtata ccgcgctgtg tggcgcatgc
      181 tgagttactt cttttttcat cgtcttttgc ataaaactca caaatcatga gttaaaaacc
      241 gatgatcaat gtcaaacctg ccgatgatag atatcaacag cgcttgtgcc gttattcatt
      301 gtaaatcctt tgtcgaacgg ttcaaccctt aggtcgcgat aaattccatt gttctcgcga
      361 ttctttcggg atcgttcaag ccatccaccc atttcttatt agagggtctc gttaaatatt
      421 ttttctcgta agctttgttg atcgcttcag tgatctcttt gaggtctgac ggtttgatgc
      481 cacgcacggc tacaatatct tttgcgcatt ttatctcgcc atattcggcg gccaaaagac
      541 ttgtgtacca gcttttgtcc gcgccataat acgaacggct aaagatcctt ccattcacta
      601 ccaccatcca aatgcccgta aactttgttc tgtcagctcc ggcgcggacg ctggtgatct
      661 gtgtttcgtt tacgcattta agaaatgctc ttgaaaactt tttcatcatt caaagttatt
      721 aagctgaata actttgcccc atcatgaagc tgaaaaacac tttaaccgaa atattgtctg
      781 tcgattaccc tttagtgcag gcgccgatgc ttggcgttac aacgcctgaa atggttgccg
      841 ccatatcgaa tgaaggtgca ttgggttcgc tgccaatagg cggtctgcca cctacccagg
      901 cgcttgcact cattcaaaaa acaaaacagt tgacgaacag gccatttgcg gtaaacctgt
      961 tcgcgaacgc aggtccggct acaattgatg agaatgtatg gagtcaaatg caggctttga
     1021 tcgagagctt ttgtgcgcgg tatgggctgg cttatgaacc acagtcatac gaaggacgga
     1081 aatttttttc ctatgaggat caggtggaga tactgtgcag tgaaaagatt tcgctggtga
     1141 gtttcacgtt tggtgtgtta agcgatgaca cgataaacgc actgcacaag caaggcatgt
     1201 tgttaattgg aactgcaacg agcgttgagg aagcgtcgtt ccttgccggg aaaggcatcg
     1261 acatcataac agcgcaggga atcgaagcgg gcggacaccg cggaactttt ttacgtgagg
     1321 atataccaca agttggattg atggctttac tgccacagat agttgacgca gttgataaac
     1381 ctgttttggc cgcaggaggc attgcggatg gcagagcgat aaaagcagcg atgatcttgg
     1441 gtgcggctgg tgtagtggtg ggaagcgctt ttattggctg cgacgaaagt gcggcgaatc
     1501 caaagtataa ggcattgctt caacaaggaa cggataccag tactacgctt accaaatcgt
     1561 ataccggtcg ctggtttcgg gttatagaca atgacttcat tcaaactgtt gaatcatccg
     1621 gattgcctgt gaaccaattc caggtgcagc aactgcttac aggttttttc aggggacttc
     1681 atcaatataa aaatgcggaa aaatttttgc ctatgccggc gggacaaaat gtgcgtaaaa
     1741 caactgctgt tgatgctgcc accatcgtgc atgatttgtt gagagaagca gaatgggtgc
     1801 gcgctgaaca gcagtcttga atggtctgtt cttgcgcgga acgtgaagaa atatgtttgt
     1861 atgttttcgg cggagtcaat tatcggtgcc cagcatcgtg tctcggagag gacgatgctg
     1921 atcagtgctg gtcggacgaa aatttcctga catttctcgc ttatcttttt ccctaacact
     1981 gttgaatccg gtcggaaaat agatttttat tttattactt ttaaacgagc gtgatttttt
     2041 tcagaccaca actagcgtgg gcgattcatc aattagtatg aaacataatt ctccacgtgc
     2101 ggccgggata ttatttgccc gcatgctact cggtatcata ttcctgatgc agggatttgg
     2161 caagatcttt atgttcacag ttcctaaagt gtatgaaatg ttcttcaaag atttcgaatc
     2221 aacatttctt cctaattggc tcatatgggc gtccgcgtac tatacctctt acgccgagat
     2281 gatttgcggt tttctgctcg tcatcggctt gtttagacga tatgctatgt atttgttggc
     2341 tgcagatcta ctgatcgttt cgttcggcca cgggctgata gaaccaattt gggatttgag
     2401 tcacgtgatg ccgagagcaa tacttctgat cctgttattc cttgctccgc ctgagtggga
     2461 catttatcac gccgatcgca tgttacgcaa aagcagttga gcggatagag ctttttttgt
     2521 tttgagcaga gtcttgagtt gccacactta taatgcctga tattattttg gatgcgaatg
     2581 aatcaggaat gatgttagag gaaacctctc acacgcattc cagcagaaaa tttacttatc
     2641 ttgttttttt tatcacaagc caaccacgca tgaaaccagt atccaaaaca gccttctatt
     2701 gttgcggtgt gcgcatgcag gatgcagaat cagcgcggcc tgttattggt gataactatg
     2761 caaagcgact aatgagtgac gaaggcttgc aatactggga agaattcaaa gaatttaaaa
     2821 tgcctaatgc gagcaatata gcaagggcac atgttatcga taattattta agagagctgt
     2881 tatctgctcg tcccgattcc acggtgatcc ttatcggggc gggacttgat agccgcgcgt
     2941 atcgcattac aggaggaagc tgggtagaaa tagatgaacc cggagtaata gaatataaga
     3001 atgaaaaatt acctgtatct gaatgcgaaa atccgcttgt gcgaattccg atcgattttg
     3061 agacacagaa gctggcggat aaattatcta attaccgaaa ccgcccgaac gttgtcatta
     3121 ttattgaggg cgtgttaatg tacctgacga tgccacagcg ggaggcatta ctgtcaatac
     3181 tcacttcgct gtttgcagtg cacgtagttt tctgcgattt gatgacgaag aaattttttg
     3241 aaaagctcgg ccagcctctt cataacaaaa taaaagcgca tggcgcttca ttcacggata
     3301 tgatgaacga tcccgctgac ttgtttttaa ggcacggtta ccggcagctt gccagggttc
     3361 ccacgataaa aacatcgata caacttggtc tttccaaact gccgaaattt gcgttcctga
     3421 tcgcggggaa attattgaac ggttacgcag tatatcaatt ctcatatcac gggccttcgt
     3481 aaaagcatcc ggaatttttt tcaacttgaa ggtatcgccc ttgttggcag gcgacaggat
     3541 aaaacatttt ttgtaaatca acaatgcctt atatcgccag ctcaaaaata tctgctatca
     3601 aattagctgg tgctgtttgc ctggccttgg cggcaagatc atacacgatc atcaaagaat
     3661 ttgttttacc ggcaaccgtc gaaaacgacg tcatgccctc agcatggtct tcgcctgagc
     3721 cataaggtat atctatgatc ttcttcaatt catcattgtt attgttagcc gacacaaacg
     3781 atactcctgt ttttttcacg ccttccttcc atctaaaaat ggagacaggt ccatcaaggt
     3841 ccattgttgg cccggcgagg atcaacaaat ctgttccgtc aatataaagg tcacgaatgc
     3901 caaggcctcc caattcaaaa aaatgttttc ggcataatgt tgtattcgca gcgtttccgt
     3961 caacatcttt tagttcgaag acagaagaat tgttctcacc ttcgggtctc agctcaagaa
     4021 ttattgccca gcctctcaat accggcccgc gcaacccgac aaacacgcgg ccgtcatcgg
     4081 ttacggcgag accttcaata tcaaaaccat tgtctttgct tggaatcgca aagaatggtt
     4141 ttaagtgatc atcctgtgcc agcatcgctg tgagctgatt gccattgtcc tcaagcctta
     4201 agtgcgctgc cgtttttgta ataccatttt gctgcgtttg cttttccgga acacggttcc
     4261 catctttttc caccagcggg atacgcgcca gcaaatatcg attccgaatt tcttcaggct
     4321 tacttatttc tgaaagacgt tttaagttct cttcaacagc atcgtttttt tttgcctttt
     4381 tccggcttaa actgtgtgaa cctatcagcc acaggtagcc atctctataa tcaagacctt
     4441 caatgtctat ttctccctgc accccaccgg gaagagcgag atatttatcc aaagggaaat
     4501 gtgcgtgttg acaataagtt ttatttgcac ctgcattact gtttttgcac gaaaggcgtt
     4561 caagagcgat cgtctcatcg ttggcggtcc aaacttcatc gccaatcagc acaacagcag
     4621 acaagccttc agaaagtttt ttgttgttac taagttgatt taactgcagg tcaaattcaa
     4681 agagagcgaa gttagcttga ggcatagtct taggttttcg gtgcgtaatt gtccccttat
     4741 gaaggagacg ttgacaaacc gaatttaaac atttccctcc gatggagcaa gcacaacatc
     4801 attcattacc acagaacctt aaaggtggct gatgcaatta aataacatat agcacgcgag
     4861 aaatgattta ttgttttcaa ctcagttcat agccatgatc gcggccatcg ttccgatacc
     4921 ttcccataca aatttcaact gcacattttc gttttctgca tgttgattat tatcataatt
     4981 caccacaggc atcacgaccg gttttgaatt aagatatgtt tcaaataaga ataacggcaa
     5041 gcttcctccc atcatgggct tgagaagaac accataatca actgttgatt gcactgcttt
     5101 gatgacgctt tgcgcaaccg gcagatccat cggtgttcgc tgcgcgacat agccgccggg
     5161 aatgattttt acttttataa gataaccgta taacgcccgc tcttcatcgg ttggatcgtg
     5221 atcaatgaca tggtaaccct tcgactcgat gtaatctttt accttttttg cctgccgttg
     5281 catatcgttg ccaggtacaa gccgcaggtt tagcgacgct tcggcggtgg cgggaatgac
     5341 gtttgctgcg agttttcccg tgttcgcgct ttcaatgccg tcgatgttta atgaaggcat
     5401 gcttagcaat tccaaaaaag gttttccatc gccatccggc gctgctacgc ccaattcttt
     5461 tttcaacgtt cctccaacat caggaattgc agcgatcgca tttttttctt cagctgttag
     5521 agggaccatg tcgtcgtaaa aaccgggtat caacactttc cctttatcat cctgcattcc
     5581 cgacaacaat tgcgcaagcc gcatcgcagg attcggcgcc cagttaccat agttgccact
     5641 atgcaatgga cgttttgcgc cgtacacagt gagatccatg ttcacatatc cgcgcgcacc
     5701 aaacacaatc gtttttttgc ccgagacgtc tctcggcccg tcaacaacga tccatacatc
     5761 agcctgtaat ttttctttgt tgtttttaaa tatttcatca agatgcggcg agccaacttc
     5821 ttcctcacct tcaaaaaaga atttgatatt gtttgtcatc gtgacacccg atctttttaa
     5881 tgcatcataa gcatttaata tggtcatcac gccagctttg tcatctgcgc tacccctgcc
     5941 cgttaaccgc cattcatcat ttaacggatc tcccggttca tgatgcacga tcgttccacc
     6001 atgttcaaga ctattggtaa tgaagacagg tttgaacggc tccagcccat tcgcccattg
     6061 tttcgggttc acaggctgac catcataatg tgcgtaaaac gcgatcgttc ttttcgcgcc
     6121 gggaactttt atttctccat aaacggccgg atttacaccg gctgttgtcc catgcagcag
     6181 ctcactctca attcctttgt cttgcatcat tttttgaata aatgctgtgt tcaaagggat
     6241 gttttgagaa tctgcagaca catttggtat cgaaacaaaa ctcgtgtatt catccatcat
     6301 ccgatccttg ttcgcctgca cgaattgttt tactttatcg ttgagcgttt gtgccgatac
     6361 ctcaaccgca aaacaacaga tgatcaacaa taagaccgcg tgaaaaactt tcatgagcag
     6421 atgtatttgc tttgaaggtg gcctaaaaat gacaaattct caagattttt tgcaaacgct
     6481 tttccggatt tgaaaacttt tgaatcattt tcaaacggat ggcaggcagt cgaatacctg
     6541 gatgtgttaa gaaagacaag atcagcggga gcattgtata gcgtcgtcat gttgagtacg
     6601 gcgtttctat tttaatccga atcgaagctt gctgcaaaca acttcaattt ttcttcatga
     6661 agtactcaga tgttccgtca ttaaaatgga tcgcgatctt gctcgccgcg ttattttgat
     6721 ctttcacgaa ttctatttga atgtcattgt catcgccgtc ggatcttttc atcacggttt
     6781 ctgacaacgg gattaatttt gatttgtgcc cttttgccgt gacaaaatat agcgtgtcgt
     6841 tctcaaacga taccgtgatc ccgtcaaaat ttccggtgta tgttcttaat gttgctgcat
     6901 ccacgattgc cgggtttagt tttaagccaa gtaaattttt ctgccattgt gctgacgcga
     6961 tctcctgctc atcctttgac gttttagtta tgttgtcata aagatgaaac agtgcaacat
     7021 ccaaagcact atctgcgccc gtctcaatgt ttggcttaac gccaactcct tcccagtttg
     7081 ttttagtgac gggattaatt gctttttcat agggtacaaa agcgacaaaa ccgttggtga
     7141 tcgcaaaagg cgcaacaggg tgcgcgccgc cccccgtggt ttcaccaaca acgacggccc
     7201 gtttcagcgt ttgcagatcg taagcaaatt cttcacccgc tgaaaacgtg ccatgacttg
     7261 tgagaatgta taaaggtttg tttttgaaaa gatccgtttc gggaagtgac gttgtaacaa
     7321 atgatgttgt tttgttggtt cttctttcaa agaggtcgtt gaggtgaact ttttgatcaa
     7381 aaaagtaact gcagatcagt tgcaccattt caggttcacc gccaatattt tcccgcaaat
     7441 caattatgat ggcatttgta tggtccagga atttgaaagc agcatcaaca gtttcacgcg
     7501 agtaattatc aaccgcgtag aattggttaa attttataaa gccaacattt gattttaata
     7561 cttcaacttt tacaaatcca aagtttgctt ttttagcccg ctcaaattct tctttcgcct
     7621 ggtcagcctg tttggcggtg gtattgttga ggttcgcata tagatccggc tcatagtgaa
     7681 ccgacaaatg gtgatcaaaa taaatactcc tcagatctgc agtcagttta tcggcgaagt
     7741 cagcagggtc gaaaatgctg tcgtaggaac cgttttgtaa gcgcgtttct aaaaacgtgg
     7801 ccattttatg t
//
LOCUS       DASQJI010000414         2285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_816150,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000414 DASQJI010000000
VERSION     DASQJI010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816150"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VEV83_11720"
     CDS             complement(<1..197)
                     /locus_tag="VEV83_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45832.1"
                     /translation="MRKSFLLLLFEVAVCVAFAQSDTSTLATIKKFQSELKTEYADPY
                     HSPLSAKARKDFKGIQFFPVN"
     gene            276..746
                     /locus_tag="VEV83_11725"
     CDS             276..746
                     /locus_tag="VEV83_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HYK45833.1"
                     /translation="MKKTKSSKRASLFFDRFSSTITKLTGKPGAFILACVIIILWAVT
                     GPIFDYSDTWQLVINTGTTIITFLMVFVIQQSQNKDTIALQIKLNELIASSPDASNRL
                     IDVEDLTPEELETLKKFYVRLSQLAKKESDIKATHSIEEAAGKHAAKRKAIDKG"
     gene            complement(743..1279)
                     /gene="dcd"
                     /locus_tag="VEV83_11730"
     CDS             complement(743..1279)
                     /gene="dcd"
                     /locus_tag="VEV83_11730"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008578400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HYK45834.1"
                     /translation="MILSDKRILEEIEKGTIKIDPYDRECLGSNSYDVHLGKWLATYR
                     EHILDAKKHNEIEYFEIPDEGFVLYPHIFYLGTTQEYTETHAHVPFLEGKSSTGRLGI
                     DIHATAGKGDVGFCGHWTLEISVKQPVKVYKGMPVGQLIYFPVDGEIEVKYNQKKNAK
                     YAQQPEKPVESMMWKNKF"
     gene            1595..2278
                     /locus_tag="VEV83_11735"
     CDS             1595..2278
                     /locus_tag="VEV83_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HYK45835.1"
                     /translation="MQSKIVNLPLSLFYQHIINQTTKLGIWKIEEAEDFFLAEVPLQQ
                     NITHPHKRLQHLAGRYLLKYLIPDFPYDEILIADTRKPYLPGEQYHFSISHCGDYAAV
                     IVSSTHRVGIDIEIPSPKVERISHKFIHQNEKQWLDGFLAEPQTSNVELQTILWSAKE
                     AIFKWYSLGGVDFKEHMQLSNFIQKQNDNFLLPVVFNKRSSIELGISSRIFERIVLSW
                     VMTEANTFN"
BASE COUNT          671 a          511 c          448 g          655 t
ORIGIN      
        1 atgttaacag gaaaaaattg aatgccttta aaatcttttc ttgcttttgc gctcagcgga
       61 gaatgatacg gatctgcgta ttccgtttta agctcgcttt gaaatttttt tattgttgct
      121 agcgtagagg tatctgactg agcaaaggca acacataccg cgacctcaaa aagcaacagc
      181 aaaaatgact tgcgcatatt gtttgtaatt tcaacctaag gtagttatcc atcggggcaa
      241 tcacctataa cttaattata aaattcaaca acgacatgaa aaagacaaaa agcagcaagc
      301 gagcttctct ttttttcgac cggttttcaa gcaccatcac aaaattaaca ggcaagcccg
      361 gagcattcat cttagcgtgc gtcatcatca ttttgtgggc cgttaccggt ccgatattcg
      421 attattcaga tacctggcaa cttgtaataa atacaggcac gactatcatc acattcttaa
      481 tggtgtttgt tatccagcaa tcgcagaata aagacaccat cgccctgcag ataaaattaa
      541 atgagctgat agcatcaagc ccggatgcga gtaaccggct catagatgtt gaggacctta
      601 cgccggaaga acttgaaacg cttaagaagt tttatgtgcg cctctcacag ttggcaaaaa
      661 aagagtcaga cattaaagcg acgcattcca ttgaggaggc tgcaggcaaa cacgcggcta
      721 aaaggaaagc gattgataaa ggttaaaact tgttcttcca catcatgctt tcaaccggct
      781 tctcgggttg ttgcgcatat ttcgcattct tcttttgatt gtattttacc tcgatctcac
      841 catccacggg aaaatagatc aattgaccca ccggcattcc tttatacact ttcaccggct
      901 gcttaacaga gatctccagc gtccagtgtc cgcaaaaccc aacatcacct tttcctgctg
      961 ttgcatgaat atcgatacca agccggcccg tcgatgattt gccttccaga aaaggtacat
     1021 gcgcgtgtgt ttcggtgtac tcctgcgtgg tgcctaaata aaaaatgtgc ggatataaaa
     1081 caaatccttc atcaggtatt tcaaaatatt ctatctcgtt atgttttttt gcatcgagaa
     1141 tatgttcccg gtaagtagcc agccattttc ctaaatgcac gtcgtagctg ttgctgccca
     1201 aacactcgcg gtcgtatgga tcaatcttga tcgtcccttt ttcgatctct tccaggatcc
     1261 gtttgtcaga aagaatcatt ttgatgtgcg atttatgagt acaattttta cgattttggg
     1321 actgtcatct ttctccgctt ttggcagctt cagttcgggc tttcgttaca agtcatcacg
     1381 ccagcacacg atcagccgcc cttcgttgcg ggcttttcac gtcaaatacg cagcattcat
     1441 tgagaccatt taaaaacaaa catgcccgaa ataatcccgc agccttcacc aacagaatat
     1501 ttatcccgca gactgatcga tcgaaatcca acgaatgaat ttcgttgcaa ataaatcgta
     1561 aatccctgcc cgaataaaat ttaattttag gcgggtgcaa tctaaaatcg taaatctccc
     1621 gttgtcttta ttttatcaac atataatcaa ccaaacgacg aagctgggca tttggaaaat
     1681 tgaagaagct gaagattttt ttcttgcgga agttcctttg cagcaaaaca tcacgcatcc
     1741 gcacaagcgg ctacagcatt tagccggaag gtatttgttg aaatatttaa ttccggattt
     1801 tccatacgat gaaattttga tcgctgatac acgcaaacca tatttgcccg gggaacaata
     1861 ccatttttct atttcacatt gcggcgatta tgctgcagta atcgtgagct caacgcatcg
     1921 tgtgggaatc gacatagaaa ttccttcgcc gaaggtggag cgcatcagtc acaagttcat
     1981 ccatcaaaac gaaaagcaat ggctggacgg atttttggct gaacctcaaa cttcaaacgt
     2041 agaacttcaa acaatcctgt ggagcgccaa ggaagcgatc ttcaaatggt atagtttagg
     2101 tggagtcgat tttaaagaac acatgcaact ttccaacttt atccaaaaac aaaacgataa
     2161 ttttttgctg ccagttgttt tcaataaaag atcgtcaatt gagctcggca ttagctcaag
     2221 aatttttgag cggatcgtgc tgagttgggt gatgactgaa gcgaatacct tcaattaaac
     2281 ttata
//
LOCUS       DASQJI010000415         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2812107,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000415 DASQJI010000000
VERSION     DASQJI010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2812107"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VEV83_11740"
     CDS             complement(<1..279)
                     /locus_tag="VEV83_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HYK45836.1"
                     /translation="MQRRKFMQQSALASASILAASSLKANNPQNNSDTFTLNYAIHDG
                     MFAETAGKDFLDQIQFAYDNGFRAIEDNGMMDRPADEQKKIGDLLAKLN"
     gene            474..>1737
                     /locus_tag="VEV83_11745"
     CDS             474..>1737
                     /locus_tag="VEV83_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5103 domain-containing protein"
                     /protein_id="HYK45837.1"
                     /translation="MKRTSLLALLTLLFFLRLPAQEPDRIYMANIHTVKLFVGADQDA
                     YPIIPLNAATVMQLHFDDLDATVKNYNYTYVLCDADWKPADLSPFDFLTGFTQGRLGQ
                     YRSSSVAKTRYVHYQALLPEPSCMPKRSGNYLLKVYLNGDTSKLAFARRLLVLDNVLP
                     IGAKVTEPYNSQLFLTHQKVQFTVDKTKVNIMNAPQQLKVVVLQNFRWDNAVWGLQPT
                     FMRGNIYEYSSDLNCVFPAGREYRWADLRNFRFQSERVDSVDFNAKPFDLWLHPDPQR
                     TNLRYVTYVDLNGFYHVDATDVNNPWWQGDYANVHFEFVPQNAQAFQNKQVYIIGELA
                     TGNCDNAECQLTFNADKQIFEKTLLLKQGYYYYTYVTKESHNKKNLTETADTEGNYSE
                     TENTYTILVYYRSLSDRADELVGAAIIDS"
BASE COUNT          475 a          374 c          414 g          474 t
ORIGIN      
        1 gtttagcttt gcgagcaggt ctcctatctt tttctgctca tccgcaggac ggtccatcat
       61 gccgttgtct tcgatagccc ggaagccgtt gtcgtatgcg aattgaattt gatcgagaaa
      121 atctttgccg gctgtttctg caaacatacc atcatgaatt gcatagttca gtgtaaacgt
      181 atccgaattg ttttgcgggt tgtttgcttt gagagatgaa gctgctaaga tggaagcgct
      241 ggctaaagcg gattgctgca tgaattttct gcgttgcatg acggagattt gaaactaaga
      301 tacacgagat gcgattagaa acggtgtgta aaagggtact acattttgga tgttttaagt
      361 tgccatgaaa aactgaacga tgaacgtagt gcgacgcaac gaacgatgcc cactgaaccg
      421 gacgattgct ccataattct ccctacattt gagcaattac ttttatcaaa agaatgaaaa
      481 gaacatcgtt gcttgcttta ttaaccctgc tcttttttct cagacttcct gcgcaagaac
      541 ccgaccgaat ctacatggcg aatattcata cggtcaagct gttcgtgggt gccgaccagg
      601 acgcctaccc gatcatccct ttgaatgccg ctacagtaat gcaattgcat tttgacgatc
      661 ttgatgcgac cgtgaaaaat tataattaca cttacgtcct gtgcgatgcc gactggaagc
      721 ctgctgatct gagtccgttt gattttttga ctggtttcac gcaaggcagg ctgggacaat
      781 accgctcttc ttcggttgca aagacaagat acgtgcatta ccaggcttta ctgccggagc
      841 cgagttgtat gccaaaacga agtggcaact atttgctgaa agtttattta aatggcgaca
      901 catcgaagct tgcgtttgcc aggcggctgc tcgtgctgga taatgtgctt cctattggcg
      961 cgaaggtcac agagccgtat aactcgcagt tatttttaac gcatcaaaaa gtgcagttca
     1021 cggttgacaa aacgaaggtg aatattatga acgctccgca gcaattaaag gtcgttgttc
     1081 ttcaaaattt tcgctgggac aatgcagtgt gggggcttca gccaacattt atgcggggca
     1141 atatctacga atatagcagt gacctcaact gcgtgtttcc ggcgggccgg gaatatcgct
     1201 gggccgacct gagaaatttt cgtttccaga gcgaaagggt cgacagcgtt gatttcaatg
     1261 ccaaaccttt tgatctatgg ctgcacccgg acccgcaacg taccaatctg cgctatgtaa
     1321 cgtatgttga tctgaatgga ttttaccatg tggatgcaac tgacgtgaac aatccatggt
     1381 ggcagggcga ttatgcaaat gtgcattttg aattcgtgcc gcaaaatgca caggcgtttc
     1441 aaaacaagca ggtatatatc atcggcgaac ttgcaaccgg taactgcgac aatgcagagt
     1501 gccaattgac atttaatgcc gataagcaaa tatttgagaa gactttgttg ttgaaacaag
     1561 gatactatta ctatacatat gtaactaagg aatcacacaa taaaaaaaat ctaaccgaaa
     1621 ccgcagacac agagggtaat tattctgaaa cggagaatac gtatacgatc cttgtttact
     1681 atcgctcgct gagcgaccgc gcggacgagt tggtaggtgc cgccattatc gatagca
//
LOCUS       DASQJI010000416         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_355403,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000416 DASQJI010000000
VERSION     DASQJI010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355403"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..1393)
                     /gene="gabT"
                     /locus_tag="VEV83_11750"
     CDS             complement(47..1393)
                     /gene="gabT"
                     /locus_tag="VEV83_11750"
                     /EC_number="2.6.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003867 - 4-aminobutyrate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009450 - gamma-aminobutyric acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HYK45838.1"
                     /translation="MPTINLVTKIPGPNSEAILERRRNALPAGLAKSTEVVVAKAEGG
                     VVWDVDGNTLLDFAGGIGMINVGHRPQQVVDAIKAQLDKYIHTCSLVTTYEPYVELAE
                     MLNRLTPGSFPKKTLLCNTGTEAVENAVMLAKYYTKRPAIICFEGAYHGRSLLTLSLT
                     SKYSLFKKGFGSFVSDIYRLPAPNVYRTPDGMTEDEYIQSCIKNLEHAFIAQVEPESV
                     AAMIIEPVLGEGGFVQMPAAFMHKIREVCDQYGIVMIADEIQCGSARTGKLFAIEHAG
                     VAPDLMTIAKSLGAGMPVSAVVGKAQIMDCTHPGGIGGTYGGSPVAAVAAIEALKILS
                     SKEFLERAVHVGELIKSKLDRWKEKFPLVGDVRATGAMCIVEFVKDKQTKEPDIELPL
                     EVLKDAVVHGIILIRAGLYSNCIRLLPPIVMTDEQLHEGLQVLEDAIERAHEKRKK"
     gene            complement(1438..>1737)
                     /locus_tag="VEV83_11755"
     CDS             complement(1438..>1737)
                     /locus_tag="VEV83_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45839.1"
                     /translation="FRSKGIAKALYRARQNTCRQLGLKGQLTVGMLNGYAAVKDKLTI
                     EEYYEKVKQKEIFDPTVSVQQKIGFEIIRLMKDYLNDPTCGNAGALIVLDADQVI"
BASE COUNT          441 a          465 c          320 g          511 t
ORIGIN      
        1 tataaagaca tccgtgcaaa tccatccaat cagtgttagc cgtgttctat ttttttcttt
       61 tctcatgtgc tctttcaatt gcatcttcca acacctgcaa cccttcatgc aattgctcat
      121 ctgtcatcac tattggaggc agtagacgaa tacaattgct gtacaatccc gcacgaataa
      181 gtatgatacc atgaaccacc gcatctttca aaacttctaa cggcaactcg atatccggct
      241 cttttgtttg tttatctttt acaaattcaa caatacacat cgcaccagtt gcgcgcacat
      301 caccgaccaa cggaaatttc tctttccaac gatcaagttt tgatttgatc aactcgccca
      361 catgcacggc cctttccaaa aattctttcg aacttaagat cttcaacgct tcgatagctg
      421 caacggccgc gacgggactg ccgccatacg ttcctccaat tccacccggg tgcgtgcagt
      481 ccattatctg agctttacca acgactgcgc tcaccggcat tccggccccg agcgattttg
      541 cgatcgtcat aaggtcgggc gcgacgccgg catgttcaat tgcaaataat ttcccggtac
      601 gcgcgctacc gcattgaatt tcatccgcta tcataacgat gccatactga tcacacacct
      661 cccggatctt atgcataaaa gcggccggca tttgaacaaa gccaccttcg ccaagcaccg
      721 gttcgatgat catcgccgcc acagattctg gttcaacctg cgcaataaac gcatgctcca
      781 ggttttttat acacgattgt atatactcat cttctgtcat tccatcgggc gtacgataaa
      841 cgtttggggc cggcaaacga taaatgtcac tcacaaaaga gccgaatcct tttttaaaca
      901 aactatactt gctcgtcaac gaaagcgtaa gtaaacttct tccgtgataa gcgccctcaa
      961 aacaaattat tgccgggcgt ttcgtatagt actttgcgag catgacagca ttctccaccg
     1021 cttccgtgcc cgtattgcag agtaacgttt tctttggaaa gcttccaggc gtaagcctgt
     1081 tcaacatttc tgctagctca acgtaaggct cgtatgttgt cacgagcgaa caggtgtgaa
     1141 tatatttatc gagttgggct ttgatcgcat caacaacctg ttgcggacga tgaccaacat
     1201 tgatcatccc gataccgcct gcaaaatcca gcagtgtatt gccatcaaca tcccaaacaa
     1261 caccgccttc agcttttgca acaaccactt cagtagattt agcaagtcct gcaggcaatg
     1321 catttcttct tctttctaag atcgcttcgc tgttcgggcc gggaattttt gtaactagat
     1381 ttatcgttgg cataaaatat atttggttag ttgctgctca ctcaaattgt caaattctca
     1441 aattacctga tcagcgtcca gcactatcaa cgcccccgca tttccgcatg ttggatcatt
     1501 tagataatct ttcatcagtc gaattatttc aaaacctatt ttctgttgca ctgaaacggt
     1561 tgggtcaaag atttctttct gcttaacctt ttcataatat tcttcaatcg tcaatttatc
     1621 tttaaccgcg gcgtagccat ttagcatgcc aacggtaagt tgtcctttta gtccgagttg
     1681 cctgcacgta ttttgtcgtg cgcggtacaa tgcttttgct atgcccttgc tgcgaaa
//
LOCUS       DASQJI010000417         6421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2045244,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000417 DASQJI010000000
VERSION     DASQJI010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045244"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1434
                     /locus_tag="VEV83_11760"
     CDS             <1..1434
                     /locus_tag="VEV83_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HYK45840.1"
                     /translation="GQEVTGPNGTVLADKFGGFSTILLPMLIAGTGIIFSIIGTFFVK
                     VSDAGGINTANVQKALNMGNWGSIVLSAIASVGLVKYILPDTMELRGHIFTSNGVLGA
                     ILVGLAVGTLMSMITEYYTAMGKRPVLSIIRQSATGHATNVIGGLAVGMESTMLPILV
                     LAAGIYGSYACAGLYGVAIAAAGMMATTAMQLAIDAFGPIADNAGGIAEMSELPKDVR
                     EKTDVLDAVGNTTAATGKGFAIASAALTALALFAAFVGVAGITGIDIYHADVLAALFV
                     GGMIPFIFSSLAIRAVGQAAMAMVEEVRRQFRTIPGIMEGTGKPEYEKCVAISTDASI
                     KKMMAPGAIAIISPIAIGFLLGPEALGGFLAGATVSGVLMGMFQNNAGGAWDNAKKSF
                     EKGVEINGEMYYKKSEPHKASVTGDTVGDPFKDTSGPSMNILIKLMSIVSLVIAPTLA
                     QLYHTKENASAVKHKTEIKTTASLPIK"
     gene            1539..2018
                     /locus_tag="VEV83_11765"
     CDS             1539..2018
                     /locus_tag="VEV83_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45841.1"
                     /translation="MKPFCLLLIAACFISCHSSTSEKKEPGADSIAYGYDHIPAERST
                     INPNPVKTYRETIKSFETTDQFVVSLYETKETFHYLIKFEYKNLGAEDTLKVPNFGTQ
                     PSVEIVRGETRPSCVVGFLDKDKNFRESKLIYFEDNQLKVHVLKHYGVATYQDSLKK"
     gene            2103..4388
                     /locus_tag="VEV83_11770"
     CDS             2103..4388
                     /locus_tag="VEV83_11770"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45842.1"
                     /translation="MKNPFCHFITRAIVPTFLVHITILLLPQKAIAQSQPNIIFILSD
                     DIGYDLPTINGGESYSTPNIDSMARHGINFTHCEASPLCNPSRFMFLTGKYNFRNYSN
                     WGYMSDSEKTIGNLMQDAGYTTGFFGKLQLTYNSATMKKWGWDTHLVFDLIEDTVAFR
                     RYKNPVLIDNGYRIPDSEMVNKYCDDVLVQRIFDFIKNNGTKPFFVYYSMSLGHEPFS
                     PTPDDAAFASWDPNTDSSDANFFPSMMHYMDKKVGAVLNKLRSAGLDQNTIVFFAGDN
                     GTPPGIYYNAHGQTQIKGEKSNSTEGGTHVPLIAYWPGHIQPGIVNDDLIDFTDFFPT
                     LADIAAYQDLSGYSPLDGLSFYRRLLGLPSKKKQQLFSHFDARPGGYDPLRRWVRNKT
                     YKLYDSTEFQKSGKFYNVQKDPEELHELKESDLTASQLSLRENFKLILDTMGNWPACP
                     LLTDAFVRKITSSSANIGGTIVNAGASRLIDRGSNITDGKKGPYLDINRLHDNTVQLG
                     TFSEKRVGLLPQTHYRYAMYGMNNNTSHSTSYVQSTFYTLSQPPLRQPNFFGVASNDS
                     TLTLKWTDAVFPKTGATQAGYLLVCSTTAAVMPERMNGNSPEQIVIDGNVIPLASTKL
                     PKLPSKQIVLPAFNKNNARHFVLIPYTWDGANDSTYNYLVADARTVTIADAESVVATA
                     NGIKVSPNPAQTEFHVTLGNELSNKKTTINIFNATGKLLIKMDGIKKSQYVFGKNFPP
                     GTYFATITAGTDAFNFKLVKQ"
     gene            4552..4932
                     /locus_tag="VEV83_11775"
     CDS             4552..4932
                     /locus_tag="VEV83_11775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYK45843.1"
                     /translation="MNTIKYLKPTDSELEILQVLWEKGNATVREVHEELVQVKDCGYT
                     TTLKLMQIMFEKGLVLRDDSNRTHIYQANVSREKTQKQLMDKMVDSVFSGSHSQLVMQ
                     ALGAHTPSRKELEEIQQLLDSYKK"
     gene            4938..>6421
                     /locus_tag="VEV83_11780"
     CDS             4938..>6421
                     /locus_tag="VEV83_11780"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYK45844.1"
                     /translation="MQTFLESSFLQSLAFALLSSIWQMGLLWFATILFIRLFNLSSAQ
                     KFNIAFIAQLSGFVLFISTLVNAYQNDVSLASGAGAHAGNIYVYINVLMPYVAIVYLA
                     MLVYKIVNLFFVYKVTQSLRQNDLHKMSATTRMFVEDISSLFSLRRKVRIYLSSKIKC
                     PLTIGFLKPVILIPIAAVNYLSTEQMEAVILHELAHIKRADYGLFLLQAVIEKIFFFN
                     IFSRMLGTVIEHERENACDDWVLQFKYNSIHYAEALLKLAKLQSSSSLAMAAAGKKNE
                     LLLVRIKRLMRRSDAQIEYKFNSLLFCLFTMIIAFGAMASFTLHEPVQSPQLGKQTQK
                     VIEKPNTEITLSGISPAARMSIQNSRQKFAPSEKLTAQADPAKTPRLGNHSDAAIEMA
                     ANAPINVDPAYLINVNTTIDSLVDVAPAIDDAINKQLVLTPESYQKALSYQNFRQLET
                     MLATTGDSVRVVENESSKDSYRKLITIEATDKNGNKHVYNVIVE"
BASE COUNT         1847 a         1433 c         1440 g         1701 t
ORIGIN      
        1 ggccaggaag ttaccggacc taatggaacg gtgcttgccg acaaattcgg aggcttctcc
       61 accattttat taccgatgct tattgcggga actggtatta ttttctcgat catcggaact
      121 tttttcgtaa aagtgagcga cgctggtggt atcaatacag ctaacgtgca gaaagctttg
      181 aacatgggta actggggttc gatcgttctc tccgcaatag caagcgtggg cctcgtaaaa
      241 tatattttgc ccgatacaat ggaattacgc ggtcacattt ttacaagtaa cggagttctc
      301 ggtgcgatcc tcgtcggcct cgccgttggc acgttgatga gtatgatcac tgaatattat
      361 acggcgatgg gtaaacgtcc tgtgttaagt atcatcaggc aatcagcaac gggtcacgcg
      421 acgaatgtga tcggcgggtt ggctgtcggc atggaatcga cgatgttacc gatccttgtt
      481 ttagccgccg gtatttatgg ttcttatgct tgcgctggct tatacggggt cgcgatcgca
      541 gctgcaggaa tgatggcaac gacagcgatg cagctagcca tcgatgcatt tggcccgatc
      601 gccgacaacg cgggcggtat agctgagatg agcgagcttc caaaagatgt tcgtgaaaaa
      661 actgatgtgc tcgatgccgt tggtaacacc acggctgcaa ccggtaaagg ttttgcgatc
      721 gcgtcagcgg ctcttacggc acttgcactc tttgcggcat tcgttggtgt tgcgggtata
      781 accggaatcg acatttatca tgcagatgtg ctcgccgctt tgttcgtcgg tggcatgata
      841 ccatttatat tctcctcgct ggcgatccgc gcagtaggcc aggcggccat ggccatggtt
      901 gaggaagtac gcaggcagtt ccggaccata cctggcatca tggaaggaac cggcaagcct
      961 gaatatgaaa aatgcgtcgc catttcaaca gacgcgtcca ttaagaaaat gatggcgccg
     1021 ggcgctattg ctatcatttc acctattgct atcggattct tattaggccc cgaagcattg
     1081 ggaggctttt tggcaggcgc aacagttagc ggcgtgttga tgggtatgtt ccagaacaac
     1141 gcaggaggcg catgggataa tgcaaagaaa agttttgaga agggtgttga aataaatggt
     1201 gaaatgtatt acaagaaaag cgagccgcat aaagcatcgg ttacaggaga tacagtgggc
     1261 gacccgttca aagacacgtc gggaccatcc atgaacatcc tgattaaact aatgagcatt
     1321 gtttcgcttg tgatagcacc gacattggcc cagctttatc atacgaagga aaacgcttcg
     1381 gcagtaaaac acaagactga aataaagacg acagcaagtc ttccaatcaa ataatcacta
     1441 aaaataattt tcaacaaagg ctgtccagtt gggcggcctt ttttatttca ttaacttggc
     1501 aataattaag attatctcac ccagatgaat gtgtcgctgt gaaaccattc tgcctgctgt
     1561 tgatagctgc gtgttttatt tcgtgccata gcagcacgag cgagaaaaaa gagcctggcg
     1621 ccgactctat tgcatatggc tatgatcata ttcctgctga acggtccacc ataaatccaa
     1681 atccagtaaa aacctatcgt gagaccataa aaagttttga gaccaccgat cagtttgttg
     1741 tttcattata tgagaccaaa gaaacatttc attacctgat caaattcgaa tataaaaatc
     1801 ttggagcgga ggacacttta aaggttccta atttcggcac acaaccttcg gtggaaattg
     1861 tgcgaggtga aacgaggcct tcatgtgtag ttggtttttt agataaggat aaaaacttca
     1921 gagaatcgaa gctgatctat ttcgaagaca accaattgaa agttcacgtg ctaaaacact
     1981 atggagttgc cacataccag gattcattga aaaagtgaat tcaacattga tgttgcgact
     2041 gtatcagctt tttacccgtt tcacgagcgc aactcttttc ttcctaaatt tgaaatgatt
     2101 gtatgaaaaa tcctttctgc cactttataa cccgtgcgat cgttccgacc tttcttgttc
     2161 atattacaat attgcttctg ccgcaaaagg cgatcgcgca atctcaacct aatatcattt
     2221 ttattttatc agatgacatt ggctatgacc ttccgactat aaatggcggc gagtcgtatt
     2281 ccacaccgaa tatagattcg atggcgaggc atggaataaa ttttacgcat tgcgaagcct
     2341 cgcctttgtg taacccgtca cgattcatgt ttcttaccgg gaaatataat tttcgcaatt
     2401 acagtaactg gggctacatg agcgacagcg aaaaaacgat cggtaacctc atgcaggacg
     2461 caggttatac gacgggtttc tttggaaagc ttcagttaac ctacaacagt gcaacaatga
     2521 agaaatgggg atgggacacg cacctggttt tcgatttgat tgaagacact gtggcttttc
     2581 gccgttataa aaatcccgtg ttgattgaca atggttaccg gattcccgac agtgaaatgg
     2641 taaacaaata ttgcgacgac gttctggttc aaaggatctt cgatttcatt aagaataatg
     2701 ggacaaaacc attttttgtt tactattcta tgtcgctcgg tcatgaacct ttttcgccca
     2761 cgcccgatga cgcagcattt gcgtcatggg atccaaatac cgacagcagt gatgccaatt
     2821 tttttccgtc gatgatgcat tatatggata agaaagttgg agcagtgctt aataaattgc
     2881 gctcggccgg attggaccaa aatacaattg ttttttttgc cggcgacaac ggtacgccgc
     2941 ccggcattta ttataatgcg cacgggcaaa cgcaaattaa gggcgaaaaa agcaactcca
     3001 cagaaggagg tacacatgtt cctcttattg cttattggcc aggtcacatt cagccgggaa
     3061 tagttaatga tgatctcatc gacttcacgg atttttttcc aacgcttgct gatatcgcag
     3121 cctaccagga tctgagcggt tacagtcctt tagacggatt aagtttttac aggcggctcc
     3181 tgggattacc cagcaaaaag aagcaacaat tatttagtca ctttgatgcc cggcccggcg
     3241 gctatgaccc gcttcgaaga tgggtaagaa ataagactta caagctgtat gactcaaccg
     3301 agtttcagaa atcgggcaaa ttttacaacg tacaaaaaga tcctgaggaa ctgcacgagt
     3361 taaaggaatc agatttgacg gcaagccaat tgtcgcttag agaaaatttc aaactgattc
     3421 ttgacacgat gggcaattgg cccgcatgtc cacttctcac agatgctttt gtacgaaaaa
     3481 taaccagttc atcagcaaat attggcggca cgatcgtaaa tgccggcgca tcacgactca
     3541 tcgaccgcgg ctcaaatatt acggatggaa agaaaggacc ttatctcgat attaaccggc
     3601 ttcatgacaa tacagttcag ttgggaacgt tttcggagaa acgcgtcggc ctgctaccgc
     3661 aaacccatta tcggtacgcg atgtatggca tgaacaataa cacaagccac agcaccagct
     3721 atgtgcagag cacgttttac acactttcac agccaccgct gcggcaacca aatttttttg
     3781 gtgttgcatc aaacgattct actctaacac ttaaatggac tgatgctgta tttccaaaaa
     3841 ccggcgctac gcaagccggt tacttgctgg tttgttcaac aactgcggcc gtaatgccag
     3901 agagaatgaa tggaaattct cccgaacaaa ttgttatcga tggaaacgtt atcccgcttg
     3961 cttcgactaa acttccaaaa ttgccttcga agcaaattgt gctacctgcg ttcaataaga
     4021 acaatgccag gcattttgtt ctcattccct acacctggga tggcgcaaac gactccactt
     4081 ataattacct ggtcgcagat gccaggactg ttaccattgc cgatgcagaa tcagttgttg
     4141 cgactgcaaa tggcattaaa gtctccccaa atccagcgca gacggaattt catgtaacgc
     4201 ttggaaatga gctgagcaat aaaaaaacga cgatcaatat atttaacgcg acaggaaaac
     4261 ttttgatcaa aatggacggc atcaaaaaga gccaatatgt ctttggaaaa aactttccgc
     4321 cgggaacata tttcgcaacc atcactgccg gcaccgacgc tttcaatttc aagttggtga
     4381 agcaataacg cttagacttg cagcttaaac ccgagcggat acacgacgct tctttcataa
     4441 ccctattacg ccgcccaaat aaatttgaac ttctaaaaaa aatttcgcca ttaactttcc
     4501 ttttacgaac ataatcgtat attgcctacg aaacaaatcg ttcttaaagt gatgaataca
     4561 ataaaatatc taaaacccac tgacagtgag ttggaaattt tgcaggtctt gtgggaaaaa
     4621 ggcaacgcta ctgtccgcga agtacatgaa gagctggtcc aggtaaaaga ttgcggatat
     4681 actaccacgt taaagctaat gcagatcatg tttgagaaag gattggttct ccgcgacgat
     4741 agtaatcgga cgcatattta ccaggcaaac gtgagcaggg aaaaaacgca aaagcaactg
     4801 atggataaaa tggtggatag tgtattcagc ggttctcatt ctcaattggt aatgcaggcg
     4861 cttggtgcac atacgcccag ccgaaaagaa ttggaagaaa ttcaacaact gcttgacagt
     4921 tacaaaaagt aaaaacagtg cagactttct tagagtcgtc ttttttgcaa tcgctcgcct
     4981 ttgcgctcct gagcagcatt tggcaaatgg gattattgtg gttcgccaca attctgttta
     5041 tccgtctttt caacttatca tccgcgcaaa aatttaatat cgcgtttatc gcccagcttt
     5101 ccggattcgt actttttatt tccacgctgg taaatgcata tcaaaacgat gtgagtttgg
     5161 ctagtggcgc gggcgctcat gccggcaaca tatacgtata tataaatgta ttgatgccat
     5221 atgttgccat cgtctacctc gcgatgctgg tttacaaaat tgtcaacctc ttttttgttt
     5281 acaaggttac gcagagcctg cggcaaaatg atcttcacaa aatgtcagca accacgagaa
     5341 tgtttgttga agacatttcc tcgctttttt cactcagaag gaaagtaagg atatacttgt
     5401 cctcgaagat caaatgcccg cttacaattg gttttttgaa gccagtgatc ttaatcccga
     5461 tcgctgccgt gaattatctc agcactgaac aaatggaagc ggtgatcctg catgaacttg
     5521 cccatattaa gcgcgctgat tatggattgt ttctgttgca agccgtaatt gagaaaatat
     5581 ttttcttcaa tatattttca agaatgcttg gaaccgttat tgagcatgag agagagaatg
     5641 cctgcgatga ctgggtgctc caattcaagt ataattccat tcactatgcg gaagccttat
     5701 tgaagttggc aaagttgcag tcgtcctctt cgcttgccat ggcggctgcc ggaaagaaaa
     5761 atgaactttt acttgtgcgc atcaaacgtc ttatgcgccg ctcggatgcg cagatcgaat
     5821 acaaattcaa ctcgctgctg ttctgcttgt ttacgatgat cattgctttt ggcgccatgg
     5881 cttcgtttac actgcacgag ccggtgcagt cgcctcaact gggaaagcaa acgcaaaaag
     5941 taatcgaaaa accaaataca gaaattactt tatccggcat ttcgcccgca gccaggatgt
     6001 caattcaaaa cagccgacaa aagttcgcac cgtccgaaaa attgaccgca caagcagatc
     6061 ctgcaaaaac acctaggctg ggaaatcata gcgatgccgc gatcgagatg gcagcaaacg
     6121 caccgattaa tgtcgatccg gcatatctta ttaacgtgaa cactacgatc gattcccttg
     6181 tagatgtggc acctgcgatc gatgacgcaa ttaacaagca acttgtgctt acacccgaat
     6241 cttaccaaaa agccctctcc tatcagaact ttaggcagct cgaaacgatg ctggccacga
     6301 caggtgactc agttcgcgtg gttgaaaacg agagttcaaa agacagttac cggaagctta
     6361 taacgatcga ggccaccgac aagaacggca acaaacacgt ttataacgtt atcgtggaat
     6421 t
//
LOCUS       DASQJI010000418         7150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2659217,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000418 DASQJI010000000
VERSION     DASQJI010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7150
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2659217"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VEV83_11785"
     CDS             <1..408
                     /locus_tag="VEV83_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45845.1"
                     /translation="KQNPEHVLAFWYWGSYILWGDIPYLELPATEYDTYNRSGRGYTL
                     GRFRGPSFADFEMEYRFPISKTTKLLSGVVFTNFQTASDANNAGIFKYMEPGYGGGLR
                     ILFNKKSRTNICLDYARGRYGSSGVFFALNEAF"
     gene            complement(509..1111)
                     /locus_tag="VEV83_11790"
     CDS             complement(509..1111)
                     /locus_tag="VEV83_11790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-(ms[2]io[6]A)-hydroxylase"
                     /protein_id="HYK45846.1"
                     /translation="MNESEKNILGLQLPTDPRWVDLAEVSLEEILTDHAYCEQKAATS
                     CISLIQRYPGKEELVNELSPIVTEEWGHFRLVLQELKKRNLKLGNQRKDEYVNKLLQF
                     ETKGGSEEDRLLDKLLICALIEARSCERFKRLSEGLDDNYLRNFYRRFMESEAGHYTT
                     FIELAETYVDKSKVRKRWNEWLQYEASVIKLLTPRGDRMH"
     gene            complement(1174..2103)
                     /locus_tag="VEV83_11795"
     CDS             complement(1174..2103)
                     /locus_tag="VEV83_11795"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HYK45847.1"
                     /translation="MSKPNLTTLLAFGAIYIIWGSTYVVLRIGIETIPPFLLSSVRFF
                     LASVMLLGWSLAKKQAIPGKRSILSTAVCGVLMLGGGTVSVAWSEQFIPSGTAAIVVT
                     FVPFWFVLLDKKLWNYYFTNKIILVGLLLGFIGVILLVGLTRTDTAGLNKPGHPAFGI
                     IAILCGGIAWTVGSLYTKYKSTEGGLFVKAGIQMFATSVACLITSFIFGELRSFSLSQ
                     VSLASVIALLYLATVGSIVAFVSYLYLLHAHPPAQVSTYVYVNPLIAVLLGALIANEA
                     ISFVQVFALILILLGVLLVNMPKYKMFRRLEKL"
     gene            2207..2590
                     /locus_tag="VEV83_11800"
     CDS             2207..2590
                     /locus_tag="VEV83_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45848.1"
                     /translation="MPASQSNMRLHLQYRLWIAELNSDITILRIFDDHLAQLSAVNTK
                     VETRRTLENFSKGFSDARKEIDELKHEMHLVKMKLAANIRLPETEQQNAPSPNNHPAV
                     DKRYRSFRKKFDNLKKDFLEFDSQG"
     gene            complement(2652..4982)
                     /locus_tag="VEV83_11805"
     CDS             complement(2652..4982)
                     /locus_tag="VEV83_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HYK45849.1"
                     /translation="MKKIILPAAFFLIACNAFTQRADSLTANDYKHAESFLSYATEQF
                     VDNGKVVPNWLASDKFWYRNLTAHGSEFILVDPATGKRAAAFDQQKLANALSAATGER
                     YQPFMLPIESLQFSDDGHSIIFAAAGKLWRCDLTNYVCHAVSPTANSFAEGNPNEVLS
                     PDGSKAAFLADNNLWIRDVATNKLTQLTTDGEKDFGYATDNAGWKSSDMPVLRWSPNS
                     KKIATFKQDQRDVGDMYLVLANVGHPILRSWKYPLPGDKNIITIQRVIIDVDTRKVIM
                     LNVPPDPHRSSFQDDISASGTFDDVDWSADGSELAFLSTSRDHKQEKFRIADANTGNV
                     REIFEEVVPTQYESGPEAVNWRYLAASKEIIWYSERDNWGHLYLYDAVTGKLKNQITK
                     GDWVVTNLIKVDEKKRELYFRADGREPGNPYFSHFYKIDFAGKHLTPLTPEEGTHEIV
                     LSPSQNYFVDTYSQPDVPAVTVLRSLDGTLISKLETTDISRLTATGWKPPIPFTVKAH
                     DGKTDVYGLLYVPTSLNSKNKYPVIDYIYPGPSGGSIDTWSFTTATRDNQALAELGFV
                     VFMLEGTSNPFRSKSYHDMNYGNMAENTLPDQVACIRQLAQRYAYIDTTRIGTWGHSG
                     GGFAAACAMFRYPDFFKVGISESGNHDNRVYEDDWGERYIGLLVDSNGTSNYESQANQ
                     IYAKNLKGKLLLAHGMADNNVPPYNTMLVIDALERANKDYDLVIFPYATHGYGGENYI
                     YMMRRRWDYFVKNLLGKEPPKEYLFEMNSDPRNVLQ"
     gene            5157..>7150
                     /locus_tag="VEV83_11810"
     CDS             5157..>7150
                     /locus_tag="VEV83_11810"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45850.1"
                     /translation="MKPIQLSDAKHALCFAFFIALTNGIAAQNWLTTGNAGLTSSNFF
                     GTTDGANVVFKANNIERGRLTASNGLWRFGNSSNFAKIDSAGKLSFSGTGDYIVGNNK
                     YVFRFGGDPDYGLFFNSTNFVYEFRDANAAPVFSVNANTGDGIFKNTLKVGAYTFPAT
                     DGIPNQVLTTNGAGALTWANAVSIIGSNGIAVDGVYPNFTVNAGGLWSTHGNAGTSPI
                     SNFIGTTDATDFVIRTQDTSRLRIAGTNGRVGINSSTLNARLQVNGEPGEDAFRVQVD
                     GLTKLYVAGNSGVSIGAFLTGPPNGLFVAGSVGIGTSSSSLPHAKLHVAGGTEANLAN
                     GGFVLVGDTNTINVVMDNDEIQARNNGVASALELNPAGGKVQIQTGAEASLISGGFFV
                     IGDTASANMAMDNNEVQARTNNTKATLFLNPAGGLVSIGDDLDVNGDSISLGSAEKLT
                     DAGNNVIGSNSHFIPLSDNVRELGTSTNRWFDVWAVDGTINTSDARDKQNIRDLNYGL
                     DDVMKLHPIKFNWKTGDDPNDKLGLIAQELQKVIPEVVRDYDLKTDEATGKNEKVASA
                     RLGVMYADLIPVLINAIQQQQKEIEELKKQQSLSVTNTGATDINVMSITLSSAFLEQN
                     VPNPFGNTTSVHYSVPANATSAQIIFKDNSGKTLKQIQLS"
BASE COUNT         2016 a         1626 c         1612 g         1896 t
ORIGIN      
        1 aaacaaaatc ctgaacacgt gctagcattt tggtactggg gtagctacat tttgtggggc
       61 gatattccgt acctcgagtt acccgccacc gagtatgaca catataaccg cagcggccgt
      121 ggatatacac tcggacgttt cagaggcccg agctttgccg attttgaaat ggagtaccgg
      181 tttcccatca gcaaaacaac gaaactcctg agcggcgtgg tattcaccaa ttttcaaact
      241 gcttcagatg caaacaatgc cggcattttt aaatatatgg aaccggggta tggaggcggt
      301 ttgcgcatat tgttcaacaa aaagtcccgt acgaatattt gcctcgacta tgcacgggga
      361 cgctatggat cttcaggcgt attctttgcc ctgaatgaag cgttctgaga cgtggcaggt
      421 tttgagatga agaccgagta gcttttccgt tttagaaatt ttttatggca acgaagaaaa
      481 tttgatcgcg tataaacaat cggatacttc agtgcatcct gtcgcctctt ggtgttagta
      541 gttttataac gctggcctcg tattgaagcc attcattcca gcgtttgcga accttgcttt
      601 tatcaacata cgtttcagca agctcaataa atgttgtgta atggccggcc tcgctttcca
      661 taaagcggcg gtagaaattc ctgagataat tatcatccaa tccttcactc agtcgcttga
      721 atcgctcaca gcttcgcgcc tcgataagcg cgcatatcaa aagtttgtcg agcaggcgat
      781 cctcttcgct tccgcctttg gtttcaaatt gaagcagctt gtttacatac tcgtctttcc
      841 tttgatttcc cagtttcaaa tttcgttttt ttaattcctg cagtaccaaa cgaaaatgtc
      901 cccattcttc cgtaacgatc ggtgataatt cgttcaccag ttcctccttt ccaggataac
      961 gctggatgag cgaaatacag cttgttgccg ctttttgctc acaatatgca tggtctgtca
     1021 gtatctcttc caaactcact tccgccaggt ccacccagcg tggatcggtt ggaagctgaa
     1081 gacctagaat atttttttct gattcattca tctctgttgt ttctggaagc caatcggtca
     1141 gacgcttcag aaccgtcagg tcgcaaacgc ggctcataat ttttccagcc gtcggaacat
     1201 tttatacttc ggcatattaa ccagcaacac acccagcaaa atcaggatca aagcaaacac
     1261 ctgtacaaaa ctgatcgcct catttgcaat gagcgcgccc aacaaaactg cgatcaatgg
     1321 attcacatac acatacgtac tcacctgcgc cggcgggtga gcatgcaaca ggtacaggta
     1381 cgaaacgaat gcaactatag aacccacagt tgcaaggtaa agcaacgcta tgacgctcgc
     1441 gagcgaaacc tgcgaaaggg aaaatgatcg tagttcaccg aaaataaaac tggtgataag
     1501 gcaagcgacc gaagtagcaa acatttgtat acctgctttg acgaagaggc caccttccgt
     1561 tgatttgtat tttgtataaa gagagccgac cgtccacgca atcccgccgc acaatatcgc
     1621 aattatgcca aatgcaggat ggcccggctt gttcaaaccc gcagtatcgg tgcgtgtaag
     1681 accaaccaat aagatgacac cgatgaaacc aagcagcaat ccaacaagta ttattttatt
     1741 tgtgaaataa taattccaaa gttttttatc gagcagcaca aaccaaaacg gtacaaacgt
     1801 tacaacaata gcggctgtac cactcggtat gaattgttcg ctccacgcta ctgaaacagt
     1861 tccgccgccg agcatcaaaa caccacaaac cgcagttgac aaaatagaac gcttcccggg
     1921 tattgcttgc ttttttgcaa gcgaccaacc taacagcatc acgcttgcga ggaagaatct
     1981 aacagacgat agcaggaagg gtgggatcgt ttctatccca atgcgcagca caacataggt
     2041 agaaccccat atgatgtata tagcgccgaa cgcgagtaaa gtggttaggt tcggtttgct
     2101 catttgttat acaaataaaa accaaccgtg ttataatttc agtgtaaaaa atacaaattg
     2161 caagttgggc tggtttttta taatttgctg aggtgaaata gttactatgc cggccagtca
     2221 atctaacatg cgccttcacc tgcagtatcg gctttggata gcagagctga attccgatat
     2281 taccatactt agaattttcg acgatcattt agctcaactg tcggctgtaa acacaaaggt
     2341 cgaaacaaga cgaacgttag aaaatttctc aaaggggttt tcagacgcaa gaaaagagat
     2401 cgacgaatta aaacacgaaa tgcacctggt gaaaatgaag cttgccgcca acatcaggtt
     2461 gccagaaacc gaacagcaaa acgcgccgtc accgaataat catccggcgg tggacaagcg
     2521 ttacaggtcg ttcagaaaaa aatttgataa cctgaaaaaa gattttctcg aattcgattc
     2581 gcagggataa agtgccccgg tgagattctt gaaagagcga tgcaccgtaa acagatacaa
     2641 aacgatttca attactgcag cacattgcgc ggatcgctgt tcatttcaaa caaatattct
     2701 ttcggaggtt ctttccctag caggttcttt acaaaatagt cccaccggcg acgcatcatg
     2761 tagatataat tttcgccgcc ataaccgtga gttgcatatg gaaaaatcac caggtcgtag
     2821 tctttgtttg ctcgctcaag cgcatcaatt acaagcatag tgttataagg tggcacgttg
     2881 ttgtctgcca tgccgtgcgc aagcaataat tttcctttta agttcttcgc ataaatttgg
     2941 ttcgcctgcg attcatagtt agatgtgccg ttggagtcaa ccaacaagcc gatatacctt
     3001 tcaccccaat cgtcttcata cacccggttg tcgtgattgc cagattcaga aatgccgact
     3061 ttaaaaaaat ccgggtatct gaacatcgcg catgcggccg caaaacctcc gcctgaatgt
     3121 ccccatgttc caatcctcgt cgtatcaata taagcgtatc gttgggcaag ttgtcgaatg
     3181 catgcaacct ggtccggtaa tgtattctcg gccatgttgc cgtaattcat gtcgtgatat
     3241 gatttcgacc gaaagggatt gctcgtgccc tcaagcatga acacaacaaa tcctaattcg
     3301 gcaagggcct ggttatcccg cgttgcggtc gtaaaggacc atgtgtcgat gcttccgcca
     3361 gacgggccgg ggtagatata atcgataacc gggtatttat tttttgagtt aagagaagta
     3421 ggaacataaa gaagcccgta tacgtctgtt tttccatcat gcgcctttac tgtgaatggg
     3481 attggcggct tccaaccggt ggctgtcagt cttgagatat cagttgtttc aagcttcgaa
     3541 ataagtgttc cgtctaggct gcgtaagacg gtaactgcgg gaacgtcggg ttgcgaatac
     3601 gtatcgacaa aataattttg cgatggcgat aagacgattt cgtgagtgcc ttcttccgga
     3661 gtaagtgggg tcagatgttt tcctgcaaaa tcaatcttat agaagtggct gaagtatgga
     3721 ttgcctggct cacggccatc agcgcgaaaa tatagttcac gttttttttc atcaactttt
     3781 atcaaattag tgactaccca atctcccttc gttatctggt tttttaattt gccggtcaca
     3841 gcgtcgtaca aataaagatg accccaatta tcacgttcag aataccagat gatctctttt
     3901 gacgcggcga ggtatcgcca gttcactgcc tccggcccag actcgtactg ggtgggtaca
     3961 acttcttcaa aaatttcacg cacatttcct gtgttggcat cagcgatacg aaacttttcc
     4021 tgtttgtgat cgcgcgatgt ggaaaggaac gccagctctg atccatccgc gctccagtca
     4081 acatcgtcaa atgttccgct ggccgaaata tcgtcctgaa acgaacttct atgcggatca
     4141 ggcggcacgt ttaacatgat cactttgcgc gtgtcgacat cgatgatcac gcgctggatc
     4201 gtaatgatat ttttgtcgcc tggcaacgga tatttccatg atctcaagat cggatgtcca
     4261 acattcgcca atacaagata catatcgccg acatcgcgtt ggtcctgttt aaacgtggcg
     4321 atcttttttg aattcggcga ccatcgcagc acaggcatat cgctgctttt ccaacccgcg
     4381 ttatcagtgg cgtatccgaa gtctttctcg ccatccgttg taagttgagt tagtttattt
     4441 gtcgcgacat ctcttatcca taaattatta tctgcaagaa aagccgcttt gcttccatcc
     4501 ggtgaaagga cctcgtttgg attgccttct gcaaaagaat ttgcagtcgg ggaaaccgca
     4561 tgacaaacat agttggtcag atcgcaacgc catagtttcc cggccgcggc gaaaatgatc
     4621 gaatgtccat cgtcggaaaa ttgcaaactt tcaatcggca acataaaagg ttggtagcgc
     4681 tcaccagttg cagcggacaa cgcatttgca agcttctgct gatcaaaagc cgcagcacgt
     4741 ttgccggttg cgggatcaac taaaatgaat tcacttccgt gtgcggtgag attgcgatac
     4801 cagaatttat cgctggccaa ccaattagga acaacttttc cattatctac aaattgctca
     4861 gtggcatatg acaaaaaact ttctgcgtgt ttataatcat tagcggttag actgtcggcc
     4921 cgctgcgtaa acgcattgca tgcgataaga aaaaaggcag caggtaatat tatttttttc
     4981 ataatcaggt gtacaaatat atttttcaat ttcgtttatc gccataacta aaaaatcaaa
     5041 tacgggccag gtcgctgttc ttttgacttc aaaaaacatt agatttggat acgatcctgt
     5101 gagtgccaaa cctgttttcc ccttaaaccc catctcaatt tttaaaaatc attgttatga
     5161 aaccaatcca actttcagat gcaaagcatg cattgtgttt tgcttttttt atcgccctca
     5221 ccaacggaat tgccgcgcaa aactggctca ccacgggcaa tgccggactt acttcatcca
     5281 atttttttgg aacgaccgat ggcgctaatg ttgtttttaa agcaaacaat attgaacgtg
     5341 gaaggttaac cgcatcaaac gggttgtggc ggttcggcaa ttcgtcaaac tttgcgaaaa
     5401 ttgattcggc ggggaaacta agttttagcg gaactggcga ttatattgta ggcaacaaca
     5461 aatatgtatt ccgctttggt ggcgatccgg attatggttt gttttttaac tcgacgaatt
     5521 tcgtttatga attccgtgat gcgaatgctg cgccggtttt ttcggtgaat gcaaacacag
     5581 gtgatggcat ttttaaaaac actttaaaag tgggtgccta cacatttccg gcaactgacg
     5641 gtattccgaa ccaggtgctt acaacaaacg gcgcaggtgc attaacatgg gcaaatgcgg
     5701 tttcaataat cggatcgaat ggcattgcgg tagatggcgt gtatccaaat tttacagtga
     5761 atgccggcgg tttatggtca acgcacggga atgccggtac gtcgccgatc tcgaatttca
     5821 ttggaacaac agatgccacc gactttgtta ttcgaacaca ggatacgtcg cggctccgta
     5881 tcgcaggtac aaacgggcga gtcggaataa actcgtcgac tttaaacgca aggctccagg
     5941 tgaatggaga gccgggtgag gatgcgttta gagtgcaggt tgacggctta actaaattat
     6001 atgttgcggg taacagcggg gtgtcgatcg gggcgttttt aacagggccg ccaaacgggt
     6061 tgttcgttgc cggcagcgta ggtattggca catcaagctc atcgttaccg catgcgaaat
     6121 tgcatgttgc aggtggtact gaagcgaacc ttgcaaatgg cggctttgtt cttgtgggcg
     6181 acaccaatac cataaatgtt gtaatggaca atgatgagat ccaggcaaga aataacggcg
     6241 tggccagcgc cctcgaactg aacccggcgg gcggcaaggt gcaaatacaa accggtgctg
     6301 aggccagtct tatttcaggg ggattttttg tgatcggaga cacagcttca gcaaacatgg
     6361 ctatggacaa taatgaagta caggcaagga ctaacaacac caaagccaca ctctttttaa
     6421 atcctgcagg cgggctggtt tcaataggag acgatctgga cgtaaatgga gattctataa
     6481 gtttaggtag cgccgagaaa ttgacagacg ccggtaacaa tgtaattggc tctaattctc
     6541 acttcatacc attaagtgat aatgtaagag aacttggtac ttcaacaaac cggtggtttg
     6601 atgtatgggc tgttgatggc acgattaata cctcagatgc cagagataaa caaaatatcc
     6661 gcgaccttaa ttatggcctg gatgatgtga tgaaactgca tcccataaaa ttcaactgga
     6721 aaaccggcga cgatccaaat gacaaactgg gcttgatcgc acaggaatta cagaaagtga
     6781 ttcccgaagt ggtaagagat tatgacttga aaacagatga ggcaacgggg aaaaatgaaa
     6841 aagtcgcatc tgcacgactt ggtgtgatgt atgccgacct gatacccgtc ttgatcaacg
     6901 ccatacaaca gcaacaaaaa gaaatcgaag aattaaaaaa gcagcagagc ctgtcagtaa
     6961 cgaacactgg cgcaacggac attaacgtga tgtcgataac attaagcagc gcgtttttag
     7021 agcagaacgt tccaaaccct tttggcaata caacgtctgt tcattattcg gtacctgcaa
     7081 atgccaccag cgctcagatc atttttaaag acaatagcgg aaaaacgctt aaacaaattc
     7141 agctaagcaa
//
LOCUS       DASQJI010000419        11496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_201957,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000419 DASQJI010000000
VERSION     DASQJI010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11496
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201957"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1305)
                     /locus_tag="VEV83_11815"
     CDS             complement(<1..1305)
                     /locus_tag="VEV83_11815"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HYK45851.1"
                     /translation="MAVVDLVMPKLGESIMEATILKWHKKSGDAVKQDETVLDIATDK
                     VDSEVPSTAAGTITEILYKENEVVPVGTVIARIETAVVADNNGSRPTPTVTSVESPAQ
                     FEEEVPYVPKAYTPATNGAKINRFYSPLVLNIANSEGISMAELEQIPGTGNEGRVTKK
                     DILQYVQSRHRAPGRDYEQERKAQFVRKGSEITDLIPVDDGAKQYGDNVEIIEMDRMR
                     KLIARHMVHSKHTSAHVTSFAEADVTNMVLWREKVKKDFDKQNNTRITFTPMFIDCLL
                     RVMKRFPMINSSLDGDNIIIKKDFNIGMATALPNGNLIVPVIKNADYLNLVGLSKKVN
                     GLADDARNNKLRAEDIQDGTFTLTNVGTFGSLMGTPIINQPQVAIMAVGAIKKRPVVI
                     ETELGDTIGIRHMMYLSLSYDHRIVDGSLGASFLTAVAKEFES"
     gene            complement(1387..2646)
                     /locus_tag="VEV83_11820"
     CDS             complement(1387..2646)
                     /locus_tag="VEV83_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HYK45852.1"
                     /translation="MQNIKASIITIGDELLVGQVIDTNSAWMSQQLNKAGVWVHRRVA
                     VGDVWDDIWNALDDEKEAADVILITGGLGPTADDITKPLLCKYFGGKMIMHEETLDHI
                     TYLFEHVFKRPMPLLERNRKQAEVPDVCTVLRNGVGTAPGMLFEKENKIFVSMPGVPY
                     EMKHIMQVHVLPLLKNRFDLPHIEHRTLITMGIGESFLAERIKDFEEALPSNIKLAYL
                     PNFGMVRLRLTARGTREKVQRDLDELFEALKKHLTDVIVIDEDISFEVLLGRLLKETN
                     KTVSTAESCTGGYIAHLITSIPGSSVYFKGSVVSYDNSVKQKVLNVSEETLATAGAVS
                     EDTVQQMIMGVLDVMTTDYAVAVSGIMGPDGGTEEKPVGTVWIAVGNNKRIETKKFLF
                     RFDREKNIQITAMNALYLLCAFIRQNS"
     gene            2672..4084
                     /gene="dacB"
                     /locus_tag="VEV83_11825"
     CDS             2672..4084
                     /gene="dacB"
                     /locus_tag="VEV83_11825"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HYK45853.1"
                     /translation="MNKRLCCVVGLLVAVLQMYGQTVADKLKKATTVFLNDEQLKHAI
                     VSLYVTDTEGNEVFSLNTEYGLAAASTQKIFTSAAALSILGEKFNYETHIGYTGTIEK
                     GSLSGDLIIKGSGDPTLGSSRYKKTNPDSILNFLVHTLNHAGIKKINGNIFLDDAAFG
                     YQPLPGGYVWEDIGNYYGAGTWALNWRENQYDLILKAGANEGDTSTVLRTEPDLQVDA
                     FYNFITTAHVGSGDNTILYLAPYGTSGFGEGTIPRGINQFKVSGAFAYPADQLKAELN
                     SCLQKNRIEISGDIVTGATFMRQQKPLPVAKQTLANYTSPALDSVVFWFLQRSINLYG
                     EALLKTIAYHEDSVGTTTEGIAVLKKFWQQNGIDSSLIHILDGSGLSPQNRVTTTALV
                     KALLYARKQSWFQTFYNALPVNNDMKLKSGSIGGVRAFAGYHTALNGKKYVVAIIVNN
                     YDDSMGSVTPKIFKLLDALK"
     gene            complement(4085..4666)
                     /locus_tag="VEV83_11830"
     CDS             complement(4085..4666)
                     /locus_tag="VEV83_11830"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK45854.1"
                     /translation="MEVNEAAPKYYPKMSPFEFLQWERQQEVKHEYFDGEIFAMAGAS
                     MNHNRISSNLLGRTWNHLHGTSCNIYGSDLRISVKWRNSYFYTDAVIVCGEPEFDDEK
                     IKDTLKNPVVIFEILSSSEDVGKKLMYYMQIQSLKQYIIIDSTKINVRVITRRMEEGT
                     WKFSELMMPEERLFIEPIDLWISVADLYEGVNL"
     gene            complement(4681..5094)
                     /locus_tag="VEV83_11835"
     CDS             complement(4681..5094)
                     /locus_tag="VEV83_11835"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYK45855.1"
                     /translation="MYEAITQLRVRYAETDQMNVVYYGNYAQYFEVGRVESIRRLGFT
                     YKDIEESGLIMPVVELHTRFLRPATYDELLTIKTQVRELPVSYKIEFFQDVYNEEQRL
                     LAAGRIVLYFLEKGTWKKTNIPRPLYNALAAYFDK"
     gene            complement(5137..5547)
                     /locus_tag="VEV83_11840"
     CDS             complement(5137..5547)
                     /locus_tag="VEV83_11840"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK45856.1"
                     /translation="MKKVISIKYSAAAFNFSMFFLRLVFGLLIIIKHGYVKLRDFSTI
                     QDHFYNFLGLGMKTSLALSIFAEVLCALFVILGLFTRLATIPLIITMLVAIFGAMAAK
                     PLLEAELAILYLAAYVGILLCGPGKISIDAMMTK"
     gene            5735..8743
                     /locus_tag="VEV83_11845"
     CDS             5735..8743
                     /locus_tag="VEV83_11845"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK45857.1"
                     /translation="MAILVSSHLLQAQSTKIYNDPDADFKTAKELYQQDKFALAYPLF
                     EKLYVGDVRQSNIPISVQTEAKYYSIVCRLELNDITAVTAAQEFIELEHNAPRIDMMC
                     YHLGEYYYKHQKFSEALDYYERTNVVNMSNDEIANMKFHQGYAYFTLQRFNDAKPLFE
                     SISQISSDPNYYAANYYYGYIAFSEKKYPQALTSFQVIESQPEYQPIIPYYISEIYYY
                     RGEKDKALEHAENALKSNNQYYDLQMRELVGHIYFERGSYKQALPYLEKFVNSTEKVS
                     REDLYELSYCYYDAGDYKKASDGFKELGGKQDTVAQNSMYLLGDSYLKLGNKAGARNA
                     FLFCALNSTDPVQKEVSKFNYGKLSVELGYTDVALTELRSFVATYPKSEYVDEAKELL
                     VNVLSNTNNYDDALQLLQTVQSQSEIVKKAYPKILYGRAVELINDQQIEQADDLLDKI
                     FLLEYNEPYLPYANFWKGEIAYRIGAYDSAVYYLQNYMRDPQTYGEVTPMHARYTLGY
                     SYMRQEDYTDALKNFEQITTSITASSQPFQIDTYLREADCYFMQKKYSKALQMYETVI
                     NNQLPASDYALYQKAVIAGANNQFSQKVALLQSVQNRYPSSPLIADASMEVANTYLAN
                     EQYESAIKPLNTILASKNDAFKPQAYLKLGISYYNIKDNQSALDNFQKLISTYPNSAE
                     SDAAVDYVRDIFIDMQRPDDFVSFMQKAGKPVSFSEQDSITFIAAQSAYNNRSFDKAL
                     QGLNSYLSKFPNGQYTVEANYMAADIYNTRKDFQHALTYYTNVAAKAPNSYAEASVLQ
                     AARISYFELKDYKQAEQLFAQLKSLATNPENKLESMRGLLRCQFKLNEWNEATANAQE
                     LLQEKGIATDDKIMAEMVIAKNYQNNNQLDEASDAYKTVVALGKNEYSAEARYRIAEI
                     LFLQNKLPDAEKAGFDVINKAGSYDYWITKAYILLGDVYFKEQDYFNAEATLRSVVQN
                     ATVPELKQEAQQKLDAVLAEKNKNSKVVQQ"
     gene            8764..10416
                     /locus_tag="VEV83_11850"
     CDS             8764..10416
                     /locus_tag="VEV83_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45858.1"
                     /translation="MKQIIASIIFIFTASFAFTQEKNASDTVLPPRTVVVTSEFAPSL
                     KPTSKINFSAATPLPDSVRPALQYDIPVQNLALSYKSPELKALAENIDSNLHWTNTSY
                     VKAGYGNYSTPYLQGGLSFGDGMTSVLHVDGRYTSSNGALPYQDFSKMHLEGIGIFNT
                     KDYKNEWNANLFLDDNIQYFYGFQPDSLKFTKEELKQAFTTFGGRLSLRNKTVNSYGI
                     SYNPSIQLDVFTDNHSGKENTFMFDLPVTKSITKIFDFNIGLSGNVSSYKIPDVSIDN
                     TVYYVTPSLSFKTPNVKLIAGFTPSWDNRTFNLLPNFTLDAKLNEEKFILQGGWIGYY
                     NKTTYETLTNYNPWIQQPTVLNNALVKEQYAGFKGSAGDNFTYNARLSYLQITDQPLF
                     VNDTLTGKTFQVVYEPSLHDIRIHGELGYTVAERFSLLAGASFNQYSSLSVNEKAWGL
                     LPIEITGAVRYQALKQLLLKADAFFWDGTRYQTKAVPNGKLDPAFDLNAGAEFSILPQ
                     FNVWIQFNNVLNDKYERWKQYPVLGFNMLVGVVYSFGELKMK"
     gene            10413..11006
                     /locus_tag="VEV83_11855"
     CDS             10413..11006
                     /locus_tag="VEV83_11855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45859.1"
                     /translation="MIQQAVKKYFSLHHHFALPGIGNFSFQTSQAHIDFVNREIKPPV
                     TAITFANDNVEADKEFYNFLSRELRVDEPQAERQFEHFAASLKSELNEQKKIHLQGIG
                     YLTKQSGHLFSFQPEEIPNDYFPVITAERVIRKNATHFVKVGEQEKTSTEMHTALHQE
                     VKTVQIKKPRERWWIPAAILAFIGIVALIFYYATHPG"
     gene            11118..11465
                     /locus_tag="VEV83_11860"
     CDS             11118..11465
                     /locus_tag="VEV83_11860"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HYK45860.1"
                     /translation="MNIEQLRAFCLSLPKVTEDVKWGNDLCFLIAGKMFCVTGTGANM
                     MTSFKCDEEDFTELCERDGIIPAPYMARNKWVQVQKTSALSKTEWEAYIKKSYRLVAA
                     KLPKKTQKELGLA"
BASE COUNT         3326 a         2608 c         2455 g         3107 t
ORIGIN      
        1 gctttcaaat tctttcgcca ccgcggtgag gaaagaagca cctaaacttc cgtcaacgat
       61 ccggtgatcg taactcaaag aaagatacat catatgtcgt attcctatcg tatcacctaa
      121 ctcagtttcg atcacaacag gtcttttctt tatggcaccc acggccatga tagccacctg
      181 cggctgattg atgataggtg ttcccatcaa actaccaaac gttcctacgt tggtgagcgt
      241 gaaggttcca tcctggatat cttcagctct caatttattg ttgcgcgcat cgtcggctaa
      301 accattcact tttttactga ggcccacgag gtttaggtaa tctgcatttt tgataacagg
      361 tacgatcaag ttaccattgg gcaaagccgt tgccatccca atgttgaagt cttttttgat
      421 aatgatgtta tcgccatcca aagaactatt gatcatcggg aaacgtttca tcacccgcaa
      481 taaacaatca atgaacattg gcgtaaatgt gatgcgtgtg ttgttctgtt tgtcaaaatc
      541 tttcttcact ttttcccgcc ataacaccat attagttaca tctgcctccg caaaacttgt
      601 gacgtgtgca ctggtgtgct tgctatgtac catatgcctt gctatcagct tgcgcatgcg
      661 gtccatctca attatttcaa cattgtcgcc atattgcttt gctccatcgt caacgggaat
      721 aagatcagtg atctcactgc ctttgcgtac aaactgcgcc ttgcgctctt gttcgtaatc
      781 gcgtcccggt gcgcgatgcc tgctctgcac gtattgcaaa atatcctttt tggtcaccct
      841 gccttcattg cctgtcccgg ggatttgctc gagctcagcc atgcttatac cttcgctgtt
      901 cgcaatattc aaaacaagcg gagaatagaa gcggttaatt tttgctccgt ttgttgccgg
      961 cgtgtaagct ttcggtacgt acggaacttc ttcttcaaat tgcgcgggcg attctacact
     1021 ggttacggtg ggtgttggac gactgccatt attgtcggca acgaccgcag tttcgatcct
     1081 tgctattacg gtaccgacgg gtacgacctc gttctctttg tataagatct cggtgattgt
     1141 tcctgcagct gtagatggga cttcactgtc gactttatca gttgcgatgt cgaggacagt
     1201 ttcgtcctgc ttcactgcat cgcccgactt cttgtgccac ttcaaaatgg tggcctccat
     1261 gatactttcg ccgagcttag gcattaccag atcaacaacg gccatagtaa gaatttcgat
     1321 ttatgattta cgatttacca tcgcggtttt cagcaatcgt gagggccaaa gataagtaat
     1381 ccggcatcaa ctgttctgcc gtatgaatgc gcatagcaag taaagcgcat tcatcgcagt
     1441 gatctgaata tttttttccc tatcgaacct gaaaagaaat ttttttgttt cgatcctctt
     1501 attatttcca acagcgatcc atacggtgcc caccggcttc tcctcagtgc caccgtcggg
     1561 gcccataatt ccagacactg cgaccgcgta gtcagttgtc attacatcca atacgcccat
     1621 gatcatttgc tgaacggtat cttcacttac agcaccagcc gtcgccagcg tttcttcact
     1681 tacattcaac actttttgtt taacactgtt gtcatagctc actacactgc ctttaaaata
     1741 aacggaggaa cctggtattg aagtaataag atgagcaatg tatccgcccg tgcagctttc
     1801 ggcggtggag acagtcttat ttgtttcttt caacaaacgg ccaagaagaa cttcaaatga
     1861 aatatcctca tcgatcacga tcacatcggt caaatgcttt ttcagtgctt caaacaattc
     1921 atcgagatct cgctgtactt tttccctggt tccccgcgct gttaaacgca agcgtaccat
     1981 gccaaaattg ggcagatagg caagcttgat gtttgatggc aacgcttcct caaaatcctt
     2041 aattctctct gcaaggaaag attcgccaat gcccatcgtg atcagggtac gatgttcaat
     2101 atgtggcaga tcgaacctgt tcttcagtaa tggtaatacg tgcacctgca taatatgttt
     2161 catctcgtaa ggcacacccg gcatactaac gaaaattttg ttttcttttt caaacaacat
     2221 tcccggtgcg gttccgacgc cgttccttaa aaccgtacac acatccggaa cttccgcttg
     2281 ctttcggttt ctttctaaca aaggcatcgg tcttttaaac acatgctcaa acaggtaggt
     2341 aatgtggtcc agggtctctt catgcatgat cattttgcca ccaaaatatt tgcaaagcag
     2401 cggtttcgtt atatcatccg cggtcgggcc gagcccaccc gtaatgagga taacgtcggc
     2461 agcttctttt tcatcatcaa gcgcattcca aatatcgtcc catacatcgc caacagcaac
     2521 tcgcctgtga acccaaactc ctgctttgtt gagttgctgc gacatccagg cgctatttgt
     2581 gtcgatcacc tggcctacca gcagctcatc accaattgta attattgaag ctttaatatt
     2641 ttgcattcca aaagatcatt ttctttgtta catgaacaaa agactttgtt gtgttgtggg
     2701 tttgcttgtt gcggtgctgc aaatgtatgg tcaaaccgtc gctgacaaac tgaaaaaggc
     2761 gacaactgtt tttttgaatg acgaacaatt aaaacacgcg atcgtaagtc tttatgttac
     2821 cgacaccgaa ggcaacgaag ttttttcttt gaatacggaa tacggattgg cggccgcaag
     2881 cacacaaaag atcttcacgt cggcggcagc cctgtcaata ctgggtgaaa agttcaatta
     2941 tgaaacacac atcggttata cgggaacaat tgaaaaaggc agcttaagtg gcgatctcat
     3001 catcaaagga tctggtgatc ctacgcttgg cagttcacga tacaaaaaaa cgaatcccga
     3061 ttcgatcctt aatttcctgg tgcacacctt aaaccatgct ggcataaaaa agatcaatgg
     3121 aaatattttt ttagatgatg cagcttttgg ttatcaacct ttaccgggcg gttatgtttg
     3181 ggaggacatc gggaattatt atggagcagg cacatgggcc cttaactggc gcgaaaacca
     3241 gtatgatctt attctaaaag ccggtgcaaa tgagggcgac acttccaccg ttcttcgaac
     3301 agaacccgat ttgcaggtag atgcatttta caacttcatt actacagcac atgttggcag
     3361 cggcgataac accatacttt acctggctcc atatggcact tccggtttcg gcgaaggcac
     3421 tataccgaga ggtataaacc aatttaaagt ttcaggagca tttgcgtacc cggccgatca
     3481 actgaaggcg gagctgaata gctgcctgca aaaaaataga attgagatct caggtgatat
     3541 tgtaaccggc gcaacgttca tgagacaaca gaagccactg ccagttgcga agcaaaccct
     3601 tgcgaactat acgtctcccg ctctcgacag tgttgtattt tggtttctgc aacggagcat
     3661 caacttatat ggtgaagcgt tattaaaaac gattgcttat catgaggaca gcgtaggcac
     3721 aactacggag ggcatagcgg tgttaaaaaa gttttggcaa cagaatggca tcgattcttc
     3781 attgatccac attttagatg gcagcggatt gtcaccgcaa aaccgtgtca ccacgactgc
     3841 cctcgtaaag gccttattgt atgcgcgaaa gcaaagctgg tttcagacct tctacaatgc
     3901 gctgcccgtt aataatgaca tgaaattgaa aagtggttca atcggcgggg tgagggcgtt
     3961 cgcgggatat catactgctt taaacggaaa aaagtacgta gtagcgatca ttgtaaataa
     4021 ttatgacgat tctatgggaa gtgttacgcc gaaaatattc aagctgcttg acgcgttgaa
     4081 gtgatcaaag attaacaccc tcgtacaaat cagctacgct tatccagagg tcgatcggct
     4141 caataaacaa tctttcttcc ggcatcatca attcggaaaa cttccatgtg ccttcctcca
     4201 ttcttcttgt aatcacccgc acattaattt ttgttgaatc gatgatgatg tattgcttta
     4261 aagattgaat ctgcatgtaa tacatcagct tcttcccaac atcttcgctc gaagaaagaa
     4321 tttcaaaaat gaccacagga ttctttaaag tgtccttaat tttttcgtcg tcaaattctg
     4381 gttcgccgca aacaattacc gcatcggtat agaaatagga atttctccat ttgacggaga
     4441 tgcgcaaatc gctgccgtag atgttgcagg atgtaccatg caagtgattc catgttcggc
     4501 cgaggaggtt agaagaaatg cgattgtgat tcatcgatgc ccctgccatg gcaaaaattt
     4561 ctccatcgaa atattcgtgt ttaacttcct gctgccgctc ccattgcagg aattcgaaag
     4621 gagacatttt agggtaatac ttcggcgcgg cctcattgac ttccatcgcg taaaattaat
     4681 ttatttgtcg aagtatgccg ccagcgcgtt gtataacggc cttggaatat tcgttttttt
     4741 ccacgttcct ttttcaagaa aataaagcac tattctgcct gcagcaagta acctctgctc
     4801 ctcattatac acgtcctgga agaattcgat cttataggaa acaggtaatt cgcgaacctg
     4861 tgtttttatt gttagcagtt cgtcgtaggt ggccggccga agaaatcttg tgtgtaactc
     4921 taccaccggc attatcaaac cagattcttc gatgtcttta tacgtgaatc cgagtcgcct
     4981 tatactttcc acccggccta cttcaaaata ttgtgcgtag ttgccgtaat agacaacgtt
     5041 catctggtcc gtttcagcat atcgaacccg cagttgcgta attgcttcgt acatagccat
     5101 ctctttttga aattacggtt gcagttgatc tctgcactac ttagtcatca tcgcatcaat
     5161 gcttattttg ccaggcccgc acagcaatat gccgacataa gcagccaggt ataagattgc
     5221 caattcagct tccaaaagcg gtttggctgc catagcgcca aatatggcca ccaacatcgt
     5281 aataattaga gggattgttg cgagccgcgt aaataatccg aggatgacaa acaaagcgca
     5341 aaggacttcc gcaaaaattg aaagtgccaa tgatgttttc atgccgaggc cgagaaaatt
     5401 gtagaaatgg tcctggatgg tggagaagtc tctcaacttc acgtagccat gcttgattat
     5461 gatgagtaat ccgaagacaa gacgcagaaa aaacatcgaa aaattaaacg ctgcggcgct
     5521 gtatttaatt gaaattacct tcttcattgg agcgtgtttc agcaaaagta aattgctgaa
     5581 tgtttatcca caaattgcca gcgacgtttg cgcacgcttt ttgcctctgt atctttaagc
     5641 ggttttacgt tttctttaag aaaggtttta aaatatttgt gaatctatac cgttcaggca
     5701 atttatgatg tacaaaaatg ctccggtctt agttttggcg atcctagttt cctcccacct
     5761 tttacaggct caaagcacaa agatctacaa tgacccggat gctgatttca aaacagcgaa
     5821 agaactatac cagcaagata aattcgcgct tgcctacccg ttgtttgaaa aattgtatgt
     5881 cggcgatgta aggcagagca atattcccat cagcgttcaa acagaagcta aatactattc
     5941 catcgtttgc cggttggagt taaacgatat taccgcggtc accgctgcgc aggaatttat
     6001 tgaacttgag cataatgcgc cccgtataga catgatgtgc tatcatcttg gcgaatatta
     6061 ttacaagcat caaaagtttt ccgaagcgct tgactactat gaaaggacga acgtcgttaa
     6121 catgagcaac gatgagatcg ctaacatgaa gttccaccag gggtacgcct attttacact
     6181 gcaacggttt aatgatgcaa aaccgctttt cgaatcgatc agccagatat cgtcagatcc
     6241 gaattattat gccgcaaact attactatgg ctacatcgca ttttccgaaa aaaaatatcc
     6301 gcaggcacta acctctttcc aggtgatcga aagtcagccg gaatatcaac cgatcattcc
     6361 ttattatatc tccgaaattt actattaccg gggagagaag gacaaagccc tggaacatgc
     6421 tgaaaatgca ttgaaaagca acaatcaata ttacgacctg cagatgcggg aacttgttgg
     6481 gcacatttat tttgaaaggg gcagttacaa acaggcgctc ccctatctcg agaaatttgt
     6541 taacagcacc gaaaaagtga gccgtgaaga cctgtacgaa ttatcatatt gctactacga
     6601 cgccggcgac tacaaaaaag cgagtgatgg ttttaaagaa ctcggtggca agcaagatac
     6661 ggtcgcccaa aacagcatgt atttgcttgg ggattcttat ttgaaattag gcaataaggc
     6721 gggtgcaagg aatgcgttct tattctgtgc attgaacagc acagacccgg tacaaaaaga
     6781 agtttcgaaa tttaactatg ggaaactttc ggttgaactt ggttacacgg atgttgctct
     6841 caccgaacta agaagcttcg tagccactta tccaaaatcc gaatatgttg atgaagctaa
     6901 ggaattgctt gtaaacgttc tctcaaatac aaacaattat gacgacgcgc ttcagttgct
     6961 gcaaactgtg cagtctcaaa gcgagatcgt gaaaaaggct tatccaaaga tcttatatgg
     7021 acgcgcggtg gaattgataa acgatcagca aatagagcag gccgacgatc ttcttgacaa
     7081 aatatttctc cttgaataca atgagccata cctgccttat gcaaattttt ggaaaggtga
     7141 gatcgcgtac cgcatcggcg catacgactc tgccgtgtac tacctgcaga actacatgag
     7201 agatcctcaa acatatggtg aagtaacacc gatgcatgcg cggtatacgc tcggatacag
     7261 ctatatgcgg caggaagact atacagatgc actgaagaat ttcgaacaga tcacgacatc
     7321 aataactgct agttcgcagc ctttccagat agatacttac ctgagagaag ccgattgcta
     7381 tttcatgcag aaaaaataca gcaaggcttt gcagatgtat gaaacggtga tcaacaacca
     7441 actcccagct tccgattatg cgttgtatca aaaagcagtg atcgcaggtg cgaataacca
     7501 attctcacaa aaagtggcat tgcttcagtc ggtgcaaaat cgatatccgt catccccctt
     7561 gattgcagat gcgagtatgg aggtggcaaa tacgtacctg gcaaatgaac aatatgaatc
     7621 cgccatcaag ccgcttaata cgatcctcgc tagtaagaac gatgcgttta aaccgcaagc
     7681 ttacttgaaa ctgggtatca gttattacaa cataaaagac aatcaaagcg ctttagataa
     7741 ttttcagaaa ttaatttcta cgtatcctaa ttccgccgaa agcgatgctg ccgttgatta
     7801 tgtccgtgat atttttatcg atatgcaacg gccagacgat tttgtgagct tcatgcaaaa
     7861 ggctgggaag ccggtaagct tctctgagca ggactctatt acttttatag cagcacaatc
     7921 cgcgtacaat aaccgctctt ttgataaagc gctacagggc ctgaacagtt atctttccaa
     7981 atttccaaac gggcaatata ctgtcgaggc caattacatg gcggctgata tttataacac
     8041 gcgaaaagat tttcaacacg cgctcactta ttatacaaac gtggctgcca aggcaccgaa
     8101 cagttatgct gaagcaagcg tgctgcaggc cgcccgcatt tcttatttcg aattgaaaga
     8161 ttataaacaa gcggaacaac ttttcgctca gctcaagtct ttggccacca accccgaaaa
     8221 caaattagaa agcatgcgtg ggttgctgcg atgtcaattt aaattaaatg agtggaatga
     8281 agcaaccgcg aatgcgcagg aattactgca agagaaaggc atcgctacag atgacaagat
     8341 catggcggaa atggtgatag cgaaaaatta ccagaacaac aaccaactcg acgaggcgag
     8401 tgacgcgtat aaaacagtcg ttgcccttgg aaaaaatgag tacagcgcag aagcgcggta
     8461 ccggatcgca gagatattat ttcttcaaaa caaattaccg gatgctgaaa aagcaggatt
     8521 cgatgtgatc aataaagcag gcagctacga ttactggatc actaaagcct acattttatt
     8581 gggcgatgtt tatttcaaag agcaggatta cttcaatgcc gaggcaacgt tgcgcagcgt
     8641 agtgcaaaat gcgaccgtac ccgagttgaa gcaggaagcc cagcagaagc tggatgcagt
     8701 gctggcagaa aaaaataaaa acagcaaagt agttcagcag taaccgaaag caattacaga
     8761 cacatgaaac aaatcatcgc ttcaatcatt tttattttca ctgcctcatt tgctttcaca
     8821 caggagaaga atgcatcgga tacggtgctt ccaccgcgga ctgttgtagt aacatccgag
     8881 tttgctcctt cgttgaaacc aacctcgaaa ataaatttca gcgcagcaac tcctttacct
     8941 gattcagtgc ggcccgcatt gcagtacgat atcccggtcc aaaatcttgc gttaagctat
     9001 aagtcgcccg agttgaaagc acttgcagaa aatattgact ccaacctgca ctggaccaac
     9061 acgagttatg tgaaggctgg ttatgggaat tactcgacgc cttacttgca gggaggcttg
     9121 tcgtttggtg atggcatgac gtctgtttta catgtggacg gaaggtacac ttcctcaaac
     9181 ggcgccctgc cataccagga ctttagcaaa atgcacctgg aaggcatcgg gattttcaac
     9241 acgaaagact acaagaatga gtggaatgca aatctcttcc tcgatgacaa tatccaatat
     9301 ttttacggtt ttcagccaga ctcattaaag ttcaccaagg aagagttgaa gcaggcgttc
     9361 acaacattcg gcggaagatt gtctttgcga aataaaacag tgaacagcta tggaatcagc
     9421 tataatccga gcattcagct tgacgttttc acagacaatc attccggcaa agagaataca
     9481 ttcatgttcg atctgccagt tacaaaatcg atcacaaaga tctttgactt caatatcggc
     9541 ttgagcggta atgtcagcag ttataagatc cctgacgtta gcattgacaa tacggtctat
     9601 tatgtaacac cttcgctgtc gtttaaaaca cccaacgtaa aacttattgc cggcttcaca
     9661 ccgtcatggg ataaccgcac gtttaacctg ttaccaaatt ttacgctgga tgcgaaactg
     9721 aatgaggaaa aattcatttt gcagggtgga tggatcggct attacaataa gacaacctat
     9781 gaaacactca caaattataa cccgtggata cagcagccaa ccgttttgaa taacgcgctg
     9841 gtaaaagagc agtatgcagg atttaaaggc agtgcaggtg acaacttcac ttacaacgcg
     9901 cgcttatcct atctgcaaat aaccgatcaa cctttgtttg taaatgatac gctcaccgga
     9961 aaaacattcc aggtagttta tgaaccttct cttcacgata tccggataca cggtgaactc
    10021 ggatatactg ttgcggagcg cttttcgctg ctcgcaggtg ccagcttcaa tcaatacagc
    10081 agcttaagtg taaatgaaaa agcatggggc ttgttaccta ttgagatcac aggtgctgtg
    10141 agataccagg ctttaaaaca actgctgctt aaagccgacg cttttttctg ggatggaacg
    10201 cgctaccaga cgaaggcagt accgaatggt aaacttgacc cggcctttga tctgaatgca
    10261 ggcgcggaat tttctatttt accgcagttc aatgtatgga tccagttcaa caacgtactt
    10321 aacgacaagt atgaacgatg gaaacaatac ccggtccttg gttttaatat gctggttggt
    10381 gttgtatatt cgtttgggga attaaaaatg aaatgattca gcaagctgta aaaaagtact
    10441 tctccttaca tcatcatttt gctttgccgg gcatcggcaa ttttagtttt caaacctcac
    10501 aggcgcacat cgatttcgtc aaccgcgaga tcaagcctcc ggtaacggct ataacttttg
    10561 cgaatgacaa tgttgaagcg gataaagaat tttataattt tctgtcgcgc gaattgcggg
    10621 ttgatgagcc gcaggccgaa cgccagtttg aacatttcgc cgcctcgctg aagtcagaat
    10681 tgaacgagca gaagaaaata catttacaag ggatcggtta cctgacaaaa caatccggac
    10741 accttttcag ctttcagccc gaagaaattc cgaatgatta ttttcctgtt attaccgcag
    10801 aaagagtgat caggaaaaac gcaacccatt ttgtaaaagt aggcgagcag gaaaaaactt
    10861 cgacagagat gcacacggct ctgcaccagg aagtaaaaac cgtccaaata aaaaagcccc
    10921 gtgaaagatg gtggatacct gcagctatac tggcattcat cggtatcgtc gctctcatct
    10981 tctactacgc aacgcacccc ggctagcgca ttagcgacga gttgaatttt ctgcgcgaaa
    11041 tgaggtatcg ggcgataaaa ataatctcct ttttaaaaac gccagccttc tgctgaagtg
    11101 actaccttca tatcgaaatg aatattgagc agctaagagc gttttgcctt tcattgccaa
    11161 aagtgactga agacgtcaaa tggggaaatg acctgtgttt tttgatcgct ggcaaaatgt
    11221 tttgtgtaac cggcaccggc gcaaacatga tgacctcatt taaatgcgat gaagaagatt
    11281 tcaccgaact ctgcgaaaga gatgggatca ttccggcgcc ctacatggca agaaacaaat
    11341 gggtgcaagt acaaaaaact tcggcattaa gtaaaaccga atgggaggcg tatatcaaaa
    11401 aatcatacag gcttgtggca gcaaaacttc ccaagaaaac gcagaaagaa cttggactag
    11461 cttgagttaa acttcgtgaa tcgtcaagcg tgaaat
//
LOCUS       DASQJI010000420         5805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2966383,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000420 DASQJI010000000
VERSION     DASQJI010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5805
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2966383"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VEV83_11865"
     CDS             complement(<1..893)
                     /locus_tag="VEV83_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl transferase"
                     /protein_id="HYK45861.1"
                     /translation="MNASFVNKTLQDSTSFHSAVHEGFLYQYNSNKVYREWCGALGFD
                     FHNGVTLQKIPFLPISFFKTSKVICEDADFEVVFESSGTTGSSKSRHYVKDLSVYIDS
                     FIKCFGLFYGDVTGWCIIGLLPSYLEQTNSSLVKMVNVLIRRSGNELSGFYLNDFRRL
                     NETLRALESIGQKTLLIGVTYALLDIAEQFPMQLSSTIVMETGGMKGRRKEMTREEVH
                     KILKKQFCIEAVHSEYGMTELLSQAYSKGDGRFYCPPWMKVFVRDEEDPMLVKDQGRG
                     ALNIIDLANIYSCAFIATDDIG"
     gene            943..1404
                     /locus_tag="VEV83_11870"
     CDS             943..1404
                     /locus_tag="VEV83_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45862.1"
                     /translation="MKIKLSLAVLLMIGCVTCSKDTYNTQPSLKFVSVNGSVFPQHTS
                     VIFKLEVTDKEGDISDTVWFERVSLVGACQSLSYRDSFPIPDIGQPKNIKAEFDFTFV
                     YPSDPSNPIPVPSLAACSQHDDTSYFRFWMKDEANHASDTVQSPNIVLLQQ"
     gene            1355..2320
                     /locus_tag="VEV83_11875"
     CDS             1355..2320
                     /locus_tag="VEV83_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45863.1"
                     /translation="MRAIQYNLQILYYCSNNFALLKDLARFILYGNYFVAFCVVALCV
                     ETSIQLQVALNDFWFYFFVFAASVSFYTIAYLGEISPGTTNKRSRWYLDHKRIIRISH
                     ASLICLMIVMACYLAYKNFQSLRYLTIIDYLLLIIFPLAGLSYYGIPFLPGIKLNLRK
                     TGWLKPFVIGFVWAGIVTIYPLLYHQMQTGSGYQLPVLAFWFFVKNWMFVTVLCIMFD
                     IKDYAADYNQRIKTFVVQWGLRRTIYYIILPLSVLGFLSYVLFVTLHHFPFTRIAFNS
                     IPFMLLIIVAYSLQRRKPILYYLAVIDGLMLVKAACGVLGVLLIN"
     gene            2326..3438
                     /locus_tag="VEV83_11880"
     CDS             2326..3438
                     /locus_tag="VEV83_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HYK45864.1"
                     /translation="MAKTKAAKKKTIITNESFEFLKNYINTPSPVGFESGGQKVWLRY
                     ITPFVDSTFTDPYGTAVGVVNAGADFKVVIEAHADEISWFVNYINEQGLIYLKRNGGV
                     DHQVAPAKRVLIHGKKGPVKAVFGWPAIHTRHAGSEPKEPQPKPDNLFLDCGARNKKE
                     AEALGIHIGAVATYEEGFDELSYNYLIGRAFDNRIGGFMIAEVARLINQNKKKLPFGL
                     YVVNAVQEEIGLRGAEMIARRIKPNIALVTDVTHDTHTPMINKHVEGDIICGKGPSLA
                     YAPAVHNKLLAFVEDIATKKKIPVQWRTLSRTTGTDTDSFAYSNDGCPSVLISIPLRY
                     MHTTVEMLHRDDIESTIELMYETVIALSPKTNLGYF"
     gene            3572..4033
                     /locus_tag="VEV83_11885"
     CDS             3572..4033
                     /locus_tag="VEV83_11885"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYK45865.1"
                     /translation="MKRENGSSAMPTTFSGLVDQLFQDNLTRFFNDDFPGFPGSVHPN
                     NIPVNIRETDKSYEMELIAPGLKKEDLKLNCTGDQLTVSFEHKEENQQGSEQESWLRR
                     EYRHQSFTRTFNLNDSIDANKIGAKYEDGILRLTLPKKEAAQRISKNIEIG"
     gene            4065..4856
                     /locus_tag="VEV83_11890"
     CDS             4065..4856
                     /locus_tag="VEV83_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HYK45866.1"
                     /translation="MSHAQRLPVRQPFFISAKALNDCIFAVMINDPHLPSSLKKYQST
                     YHQVVSFDPKSDKLFRLNFTATNTELNEQLLQDTNGLSNYVSKKLADAGARYGIGGYA
                     EYRSFFYSRSSVFDATAGEEPRRLHLGIDIWADAGTPVFAFVGGMVHSFAFNNRFGDY
                     GATLILLHQLDGIAFYSLYGHISLRDISDIRAGQYVSRGQEIAHFGPPGENGNWPPHL
                     HFQIINDLEMNKGDYPGVCAYNQKEKYLKNCPDPDLVLNMMQYAK"
     gene            4955..5122
                     /locus_tag="VEV83_11895"
     CDS             4955..5122
                     /locus_tag="VEV83_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45867.1"
                     /translation="MANHNAPNDPRRFTLIAFIAFVVVFVFVMIMMLWHGSYSINDDR
                     KINYNTQVNEP"
     gene            complement(5119..>5805)
                     /locus_tag="VEV83_11900"
     CDS             complement(5119..>5805)
                     /locus_tag="VEV83_11900"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK45868.1"
                     /translation="VPAGNASSNDSKKETTAGQAMTSTFAKKKSTSASNYFYAGLILG
                     PDISFVKFQQAREVGINAGVIAGYKFKKLSIETGLIYAEKNYYTSGEYFDKSKIPYFN
                     NAQITSVDGYCHMFEIPLNVRYNFAEKKKHAWFASAGFSSYLMHKEYYNFNYIRNDTT
                     HEGAYPYYNASKNWFSILNLSAGYELKTGNKTSLRIEPYYKVPINGVGMGSISLSSVG
                     INAGITRRIP"
BASE COUNT         1612 a         1322 c         1260 g         1611 t
ORIGIN      
        1 cctatatcat ctgtcgcaat aaacgcgcaa ctgtaaatgt tcgctaaatc gataatgttt
       61 aaagcacccc tgccctggtc ctttactaac atcggatctt cctcatctct cacaaaaacc
      121 ttcatccacg gcggacaata aaatctgcca tctccttttg aataggcctg cgacaacaat
      181 tctgtcatgc cgtattctga atgcaccgct tcgatgcaga actgcttttt caaaatctta
      241 tgtacctcct ctcttgtcat ttccttccgc ctgcctttca tgccacccgt ttccataaca
      301 atggtactac tcagttgcat cggaaattgt tccgcaatat caagcaacgc ataagtaacg
      361 ccaatcagca atgtcttttg accaatgctt tcaagtgcgc gcaaagtttc gttcaacctt
      421 cgaaaatcat ttagataaaa accgctgagt tcatttcctg aacgccggat gagtacgtta
      481 accattttta caagcgaaga attcgtttgt tcaaggtatg atggaagcag gccaatgatg
      541 caccatccgg tcacgtcgcc gtaaaacaac ccgaaacatt ttatgaagct gtcaatataa
      601 acacttagat cttttacata gtgcctgctt tttgaagatc ccgttgtgcc gctgctttca
      661 aataccacct cgaaatcggc atcttcgcaa atgacctttg acgttttaaa aaaagagatc
      721 ggaagaaaag gaattttttg caacgttacg ccgttatgaa agtcaaagcc cagcgcgccg
      781 caccattcgc ggtagacttt gtttgaattg tattgatata ggaaaccttc atgaaccgct
      841 gaatgaaacg aagtgctgtc ctgcaaagtt ttgttaacaa atgaagcgtt cacaatgaac
      901 agttatttgc ttttgtttaa atttgaaacg aattacaaag aaatgaagat taagttatcg
      961 ctcgctgtgt tattaatgat cggatgtgtt acctgctcaa aagataccta caacacccaa
     1021 cccagcctca aatttgtgag cgtcaatgga tccgtattcc cacaacacac gtcagttatt
     1081 tttaaacttg aggtcacaga caaagaagga gatattagcg atacagtatg gttcgaaagg
     1141 gtctcccttg tgggtgcctg tcagagtctt tcgtatagag acagtttccc gatacctgat
     1201 attgggcaac caaaaaatat aaaggcagaa tttgatttca cttttgtcta tccttctgac
     1261 ccttctaatc ctatccctgt cccgagcctg gcagcctgtt ctcaacatga tgataccagc
     1321 tatttccggt tttggatgaa ggacgaagcg aaccatgcga gcgatacagt acaatctcca
     1381 aatattgtac tattgcagca ataattttgc tttgctcaaa gacctcgcac ggttcatttt
     1441 atacgggaac tattttgttg ccttctgcgt cgtagcgcta tgtgttgaga caagcatcca
     1501 gcttcaagtt gcccttaatg atttctggtt ctactttttt gtttttgcgg cctctgtttc
     1561 cttttataca attgcctacc tcggcgagat ctcacccgga acgaccaaca agcgttcacg
     1621 ctggtatctt gatcacaaaa ggatcatcag gatcagccac gcatcgctga tctgtttaat
     1681 gatcgttatg gcttgctacc tcgcgtataa aaactttcaa agtcttcgtt accttaccat
     1741 catcgattat ttgctgctta ttatttttcc gttggcagga ttatcttatt atggaatacc
     1801 ttttttgccg ggaatcaaat tgaacttgcg aaaaacagga tggcttaagc catttgtcat
     1861 tgggtttgtt tgggcgggca ttgtgacgat atatccgttg ttgtatcacc agatgcaaac
     1921 cggaagcggt taccagttgc cggtcctcgc gttttggttt ttcgtaaaga actggatgtt
     1981 cgttaccgtc ctgtgcatca tgttcgacat taaagattat gcggccgatt acaatcaacg
     2041 aatcaagaca ttcgtggtgc aatggggact tcgcagaaca atttattaca tcatcctgcc
     2101 attatccgtc ctcggttttt tatcttacgt attatttgtg acactgcatc acttcccttt
     2161 cacgcggata gccttcaatt caattccttt catgctactg atcatcgttg cttattcttt
     2221 gcaacgacgt aaaccgattc tctattatct tgcggtgatc gatggcctca tgcttgtaaa
     2281 ggcagcgtgt ggcgtgttag gggtactact tataaactga tcaagatggc aaaaacaaaa
     2341 gctgcaaaaa agaaaacaat catcacgaac gagtcgttcg agttcctgaa aaattacatc
     2401 aatactccgt cgcccgtggg ctttgaaagc ggaggacaaa aagtgtggct gcgttacatc
     2461 actccttttg tcgacagcac ttttaccgat ccttacggaa cagcggtagg tgtggtaaat
     2521 gccggcgccg atttcaaggt tgtaatcgaa gcgcacgctg atgaaataag ctggtttgtc
     2581 aattatatca acgagcaggg attgatttat ttgaaaagga atgggggagt tgaccaccag
     2641 gttgctcctg cgaagcgagt gctgatccac gggaaaaaag gcccggtaaa ggcggtcttt
     2701 ggatggcctg cgatccacac caggcatgca ggcagcgaac cgaaggaacc ccaaccgaaa
     2761 cccgataacc tgtttctcga ttgtggggcg cggaataaaa aagaagcgga ggcactgggc
     2821 atccatattg gcgccgtcgc cacttatgaa gaaggattcg acgagctttc ttataattac
     2881 cttattggtc gtgccttcga taacaggatc ggtggcttta tgatcgccga agtggcgcgg
     2941 ctcatcaacc aaaacaaaaa gaaattacct tttggattgt acgtcgtaaa tgcggtacag
     3001 gaggagatcg gtttacgcgg ggctgaaatg atagcccgtc gcattaaacc aaacattgcg
     3061 ttggtgaccg atgttacaca cgatacacac acgccaatga tcaacaagca cgtggagggt
     3121 gatatcatct gcggcaaagg gccgtccctt gcctatgcgc ctgcagtgca caataagctg
     3181 ctcgccttcg tggaagacat tgcgacaaag aaaaaaattc ccgtccagtg gcgcacgctt
     3241 agcaggacga caggcaccga tactgatagc tttgcctatt caaacgacgg gtgcccgtca
     3301 gtacttatat cgatcccact ccgatatatg catacaacgg ttgagatgct tcatcgcgac
     3361 gatattgaga gtacgattga acttatgtat gaaacggtga tcgcgttgtc gccaaagacg
     3421 aacctcggct acttttaacg tgaaaaaatt gcaatggccg ttttctcatc ctgaaaaaat
     3481 ttccttttca ctgaaaaaat ttcagtgacg cgaggcatgg tattccaatt gctttgagca
     3541 taataaaaag gaggaaacta tgacaactgt catgaaaaga gaaaacggca gctcagccat
     3601 gccaacaacc tttagtggtc ttgttgacca actatttcag gacaatctca cccgattctt
     3661 caacgacgat tttcccggct ttcctggttc ggtgcatccc aacaatatac ctgtgaacat
     3721 cagggaaaca gacaagagtt atgaaatgga attaatagct ccgggcctga aaaaggagga
     3781 ccttaaattg aactgtaccg gcgatcaact gactgtttct tttgaacaca aggaggaaaa
     3841 ccagcaggga agtgagcagg aaagttggtt gagaagagaa tacaggcatc aatcgtttac
     3901 aaggacattc aacctgaacg acagcatcga tgcgaacaag ataggtgcaa aatatgaaga
     3961 cggaattttg cgcttaacgc ttccgaaaaa agaagcagcg cagaggatct caaaaaatat
     4021 tgagatcgga taagtgagtt gaggccaaac gaatttcgca aagcatgagt catgcacaac
     4081 ggctgcccgt gaggcagcca tttttcattt cagcgaaagc attaaacgat tgtattttcg
     4141 ccgtcatgat caatgatccg catcttccgt catctttaaa aaaataccaa agcacttacc
     4201 accaggtcgt ttccttcgac ccaaaaagcg acaagttgtt caggttgaat tttacggcga
     4261 ccaacaccga actgaacgag caactgctgc aggatacaaa cggactatca aattatgtca
     4321 gtaagaaatt agcagatgca ggtgcacgtt atggaattgg cggctacgcc gaatatcgtt
     4381 cattcttcta cagccgcagc agcgtgtttg atgcgaccgc cggggaagaa ccgcgccgct
     4441 tgcacctggg aatcgacatt tgggccgatg caggcacgcc ggtgtttgca ttcgtgggcg
     4501 gcatggtgca cagtttcgct ttcaataatc gttttggcga ttacggcgca actttgatcc
     4561 tgctgcatca actggatggc attgcattct atagcctgta cggccacatt tctctacgtg
     4621 atatcagcga catccgggcg ggacaatacg ttagccgcgg acaggagatc gcccattttg
     4681 gaccacccgg tgaaaacggg aattggccac cgcacctgca tttccaaatc atcaatgatc
     4741 tcgaaatgaa caaaggggac tacccgggcg tatgtgctta caatcaaaaa gaaaagtact
     4801 taaagaattg cccggacccg gatctcgtat tgaacatgat gcagtacgca aagtaaataa
     4861 gtggagatat ccagcttttc attttttgag accctatgcg cttttatttt atttttgacg
     4921 caataaagcg ctcaaaaaat cttaatacca tcttatggcc aatcacaatg caccgaacga
     4981 tccaagacgc ttcacactga ttgcttttat tgcttttgtt gtagtttttg tttttgtaat
     5041 gatcatgatg ctttggcacg gcagctattc gatcaacgac gatcggaaga tcaattataa
     5101 cacccaggta aacgagcctt aggggatacg tcttgtgata cctgcgttta tgccaacgct
     5161 ggaaagcgaa atacttccca tgcccacacc atttattgga actttgtagt agggctctat
     5221 ccttaagctg gtcttattac cggtctttag ctcataacct gcactcaggt tgaggatgga
     5281 gaaccagttt ttggaagcat tatagtaagg atatgctcct tcgtgagtag tgtcgtttct
     5341 tatgtaattg aaattgtagt attctttgtg cattagataa gaagaaaaac cggcgctcgc
     5401 gaaccatgca tgtttctttt tttcagcaaa attgtatcga acgttcagcg gtatctcaaa
     5461 catgtggcaa tagccatcga cggatgttat ttgcgcatta ttgaagtagg ggatcttgct
     5521 cttgtcgaaa tattccccac tggtataata attcttctca gcatagatca gcccggtttc
     5581 aatacttaat tttttgaact tgtatcccgc gatcacgccg gcgttaatgc ccacctcgcg
     5641 cgcctgctga aatttgacaa agcttatgtc cggccccaaa ataagtcccg cataaaaata
     5701 attcgatgct gatgtgcttt tcttttttgc gaaggttgac gtcattgcct gacccgcagt
     5761 cgtttccttt tttgaatcgt ttgatgatgc attcccggcg ggaac
//
LOCUS       DASQJI010000421        15884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1583866,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000421 DASQJI010000000
VERSION     DASQJI010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15884
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583866"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VEV83_11905"
     CDS             complement(<1..681)
                     /locus_tag="VEV83_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK45869.1"
                     /translation="MPSRRNFLKTTSSFAAGVVLTNSGKDFFPENKIPVYAHLWVYAS
                     RYPPDWDCTAILENVFSDLKYAGIEGVEIMEILLRHNDAVSRFTDLIHTYNLPVAGTS
                     YYGDMWNKNEHQKILDDMQLVTERLNKIGGTMIGLTVGDAKRVKTEEELDAQAELLKK
                     IFVICNKNKIEPNLHNHTFEVANDMHDLKGTLKRIPDAKLGPDLNWLIRAGVDPVAFI
                     HTYGKQIVY"
     gene            complement(750..2882)
                     /locus_tag="VEV83_11910"
     CDS             complement(750..2882)
                     /locus_tag="VEV83_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HYK45870.1"
                     /translation="MNKYTVAAICVSLATLSACNQKAEKPSYGSNEWTEYLGGPERNH
                     YSPLDQINKNNVQQLRIAWVYHTGDSGQMQCNPIIVHGVLYGMTAATRPFAVDAATGK
                     EIWKGRTEGPDNLASSRGLVYWEDGDDNRILYTSGPWLYALDARTGKPIPTFGDSGRT
                     SLKSGLGPTSEDKMVISNTPGTVYQDLIIMPLRVSEGTDAALGHIQAFNIRTGKLAWV
                     FHTIPYPGEDGYDTWPKDVYKNTSDVGAANNWAGMSVDRARGIVYVPTGSAAYDFYGA
                     NRKGENLFANCLLALDAKTGKRIWHFQLVHHDILDRDPPAPPNLITVTQNGKRIDAVS
                     QTTKQGYVFLFDRTTGAPLFPIKETPVPVSDIPGEQSWPTQPLPTKPAPYARHTITEN
                     DINPYADNRQALIDSFRKSRFQGPFTPLSQGGTIIYPGLDGGAEWGGAASDLDGILYV
                     NSSEMPWRISIGPSSSKATGVSMTPGHSLYVMNCASCHGTDRHGNVASGFPPLVDIGG
                     KYSRDQVTAIITHGRRMMPAFTRLDEDQQKAVVGFLFGDEEKQPKLPKKTVLGSKPGA
                     DSAVSYSISGYSKFVDKNGWPAISPPWGTLNAINLNTGEYLWKVTLGETPELKSKGIP
                     QTGCESYGGPVVTASGLLFIAGTKDGYFRVYDKTNGKLLWQTQLPAGGFATPATYEEN
                     GKQYVVIACGGQKLGTKAGDSYVAFALP"
     gene            complement(3026..4609)
                     /locus_tag="VEV83_11915"
     CDS             complement(3026..4609)
                     /locus_tag="VEV83_11915"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK45871.1"
                     /translation="MKRISEYRWWLLFFVAVVAGVSCTKKLNETVYSQDTPGNFYQTA
                     DQVVAGYVLPYSFLQTHIYQIHFQDVEFVTDEACVPVLYGYIDQEGQWLRFHQHTWAS
                     PDAWILYEWQDLYQEIGYCNSFIDNIENIDVSKMNLPVSKEQMIAEVKMIRALHYYWA
                     LNEFGNIPIVEHVGVPNPTNSTPAEAFAFIEKEIKDNIDALSEKGDDNWYGHFTKTAA
                     YALLAKLYLNAEAMTGDQHWQDCIDACNAVINSGKYSLDARWNDPFLVHNENSDENIF
                     VVPFDANNAQNFNFIEQNIHENIINAKYCDNFSVDYGWRKISTQESFFDLYSKNDYRI
                     NQWIVGPQTYIDKHGDVQPVYDYEGDPMVITPQIDDLFNAGDDEGVMNIKYQIEYNYG
                     SYGSNGFVNMNNDMVVYRYADILMMKAECLMRLNGGAASQEAVDLVNQVRQRAFSAQD
                     FNNEKYTTSSLTMDELLNERGREFAYEMFRREDLIRFGKFQDAWWEKEPDPDKHYELF
                     PIPETVITANPALKQNPGY"
     gene            complement(4628..7681)
                     /locus_tag="VEV83_11920"
     CDS             complement(4628..7681)
                     /locus_tag="VEV83_11920"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK45872.1"
                     /translation="MKTNHTITSTQKKLWLVSLFFLFHHFAIAQPAAVTGTVMNENGE
                     LLQGVTITATATTGKEKYTAVTTQSGIFTFQQLKPGTTYHITASYVGYETSNENSILV
                     NSAGNNSILIRLKPSVNSLNEVVVIGYGTQKRETVTGAIATVRAEDFNSGQINDPIQL
                     VAGKVAGLNVSNTSRADPNSGVDFSLRGPATVTGYSSQPLIIIDGVPGGDLQTIAPGD
                     IASIDILKDGSAASIYGSRATAGVIIITTKRGRPGQTEVNYSGYVTTSTIAKKYDVLD
                     AQQYIKFGQDNGLQVDDQGGNTDWFDAVTRTPISHSHNLSVSGGNERSTYYGSINYRN
                     NQGIDLRSNREFVNGTIRLNTKAINDKLDFGLILVSSFDTRDYANYGAIAQSLNMNPT
                     YPVYNSNGTFFQHDVQYHLMWNPVANIYQNTYNTKEQRFLGTVNAAYHFLPYLTGAVT
                     YSLIKNNILDGSFSEINDYFQLINQTNGQASRSENNETHNVLETTLAYDKGFGDHHLN
                     VVAGYSYEDIFNEGFSAGNNNFLTNAYSYHNLGAGTGISSTDPNVSQSGVFVGSYASE
                     RTILAFFGRAIYDYRQKYLLNVSLRREGASVLGAENKWGNFPGVSAGWIISKENFMMN
                     SNAIKFLKLRVGYGVTGNQGALLPYQSLATIGPFYNGTQNSYLGDPNNGVWILPYGPT
                     TNANPLLQWETKYETNIGVDFSLLKDGWLNGSLDLYDRRIKNLLGNYSAQLPSQIFPT
                     IFANAGIMDNKGVELLLNAKLFRGSQFNWNATATFAYNKNEIVSVTSDQFFGTAIDIT
                     RVTEGVTIQRLAPGQPVAVFYGPQFGEINESGKWRFISKDGKLVGRNALGPDDYVYLG
                     NSIPKYTFGLTNDFSIGRFDASVLLKGAAGFKAVNAKRMFHENWTYYARNNLFTSALN
                     TQINDAPTFSSYYIEDGSYLKVDNVTVGYSFPLRSAYIKNVHLYFTAANLLTITGFSG
                     TDPELQINFYPPDYSQETDDGPGLESNYDYYPSTRTFTFGVDVKF"
     gene            complement(7711..8781)
                     /locus_tag="VEV83_11925"
     CDS             complement(7711..8781)
                     /locus_tag="VEV83_11925"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HYK45873.1"
                     /translation="MHQDLIARFFQKQCTAHEARQVAEYLRAHPDLLEEYLSTYEWNS
                     VVPAANMPEQFWDEIWNNIREDHKKKDRQLWLKRSIAVAAVVTLIGVGYVLFTPKENT
                     KPGNADIHTSAVADLETVENTKKDTMEIVLKDGSIVELAPGSSLDYDDSFSPNKRQVW
                     LHGAAFFEIAKDKTRPFTVYAGSLATTALGTSFTVQASGTENDIVVKLFTGIVVITPA
                     DKTVTRWNKDIYLEPGQKLRFNPSTLLAVVEKIEPSSASVPRTSQEKTPTFNATADGL
                     DFSNTTLPEVMNTLSEYYHVPITYDTSVLQTMHFSGKVLRTDSVSVILNAIAEMNNLV
                     VTRQQNEFLITKPKMKRITKPK"
     gene            complement(8849..9388)
                     /locus_tag="VEV83_11930"
     CDS             complement(8849..9388)
                     /locus_tag="VEV83_11930"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK45874.1"
                     /translation="MINAIKNGNPAAFEKVYKEHREKVYAYFLKKTNSSEDARDLLQT
                     VFLKLWQYKSSLSAEYLLEQQIFHIARTVLIDHLRRQNKLQRIKESISKVRCARPAVT
                     SIADHDVHGYLQKLLSGLPPLRKRVFELHRLEGYSYKEISEILSISVKSVDNNLAKAL
                     KHLRTVSLLLAFIVTVVMK"
     gene            9515..10309
                     /locus_tag="VEV83_11935"
     CDS             9515..10309
                     /locus_tag="VEV83_11935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HYK45875.1"
                     /translation="MNDRFSSRRKFVKDTAKGIGLFGMSSSLQAALFAAPKMKKKIVI
                     VGGHPDDPECGCGGTAAWLTAMGHNVTFMYFTTGEEGIEGKTWEEAAAIRKKECIASC
                     EILNTKPLFVGQIDGESVLGNPEMAKFEQLLYAEKPDIVFTHWPIDSHKDHQLASVLT
                     MQSFMEASEKFQLYFYEVCTGYQSFLFNPTDYVDISKYEEQKMKALACHASQDIVVDG
                     KYTQNMIDCGHPAMQDFRGRELGVRAAEAFVRFTGRGFGVIREMAG"
     gene            10889..12883
                     /locus_tag="VEV83_11940"
     CDS             10889..12883
                     /locus_tag="VEV83_11940"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK45876.1"
                     /translation="MRKLFGIVLLLVFITTHGVASSIILHAKSATVWLPKQTVKGELI
                     DFSARTVTVHFNDSIFSVQVDHDEFAISIFLKKGTNIICVEAANEQQHITSDTVEFKL
                     GYTPLPVVKPYATRAGDKIFLHALVKENPYDVPISFTWASDKNNPAPASIINTHDSAA
                     SFTLPRKKGDYRFHLTVVAGDDTAMFATFVTRTDSIHCFNIESDHAAWIDSAVIYQVT
                     PSIFVKDGHYDDITPKLPEIKQFGINTIYLQPVFETHAGGQGYDITDYFSLRKDLGTE
                     AQLRDLITTAKSLGIRVLFDFVPNHTSVFHPYVADAVLYGRDSHYYDFYQRADDGSKY
                     SSLYKRDDSGFYHYFWNKLVNLNYQNPEVEQWIIEACKYWLKKFDIDGYRFDAVWAVS
                     ARDPSFAKRLQLELKSIKPDILLIAEDKAANAQVFEAGYDAAYDWTADTSWISHWSWQ
                     YHYDPAHNPTIFNYPNENERGNMLRHALFQNGDSIHLRLRFMENNDQPAFIKDHDVAC
                     TKMVAALLFSLPGIPLLYNGQEIGHAAKVYSKAPVFQADKSIRSLDSGGLYNYYQKLI
                     ALRSRYKSLRGTHMKDLPVNCPNNVVAVYRWQEAEKFVVIVSLGGNAQQVSVDLNDVI
                     KQQNKNLFFTDVLTNETFTSSSLLTIRMQPQTARLLLIKD"
     gene            complement(13089..13484)
                     /locus_tag="VEV83_11945"
     CDS             complement(13089..13484)
                     /locus_tag="VEV83_11945"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45877.1"
                     /translation="MTKVLLIEDNLEIRENTAEILEMEGYLVEVAENGVIGIAKAKDK
                     LPDIILCDIMMPEADGWEVIKQLKKNKSTSRIPFVFITASVEKKEIQAGLDMGAVGYI
                     RKPFEGGELLSTVEECLKKGGDSPPGAGE"
     gene            complement(13486..14652)
                     /locus_tag="VEV83_11950"
     CDS             complement(13486..14652)
                     /locus_tag="VEV83_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HYK45878.1"
                     /translation="MKEISLESEAGFKALFEYATIAILVISRDGLIELINPAAEKLFG
                     YNNAELIGHPLEMLIPGDLRQRHVQHRTTYFDKPKARPMGRGIDLFAQKKEGHVFPVE
                     ISLGYYQLEGEMLAVAFVTDITERKQMEQQLKEANELLEKKVIERTFELTEALEREKE
                     LSEMKSRFVSMASHEFRTPLSAVLSSISLVETYKDPEHDEKRKKHIERIKASVRNLTD
                     ILNNFLSLDKLEQGKIEAERSQFDISEFMEDIIEEMDNMLKKKNQRVIYSHSGEKEIV
                     LDRKILRNIMFNLLSNAIKYSPENTEIFVSIKVDDKNVVIAVKDNGMGIPEQEQKNLF
                     KNFFRANNTVNIQGTGLGLSIVKKYVELLHGSINFESKTGSGTIFTVQFPENGK"
     gene            14870..15691
                     /locus_tag="VEV83_11955"
     CDS             14870..15691
                     /locus_tag="VEV83_11955"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK45879.1"
                     /translation="MNAPRPVAKIKHWRSDKLLDVGFSSYSLTHHSFPRHFHDHYVIQ
                     LVVNGADRFYCSGNTYQAAANELVFINPGEVHTGSAVGGKTLVYYSMSPSIEQLQQIA
                     SILEKPLQNDLSFANQSSNRSRLANKMRSLFHAIEEDAQSLLSEELFLDFMNDLLDNG
                     KGYDQTPKRCDERVQELINIMRESFTEPLSLQQMSEVTRISPFHLIRLFKASTGLSPY
                     EYLLTLRVEHARKLLTKGRSVQDAALESGFYDTSHLNRMFKKVSGSSPKIFRSSK"
BASE COUNT         4155 a         3597 c         3512 g         4620 t
ORIGIN      
        1 gtacacaatt tgttttccgt aagtgtgaat gaacgcgact ggatcaacac cggcgcgaat
       61 aagccaattc agatcggggc ccaactttgc atccggaatt ctttttaaag ttcctttgag
      121 atcgtgcata tcattggcga cttcaaacgt atgattatgc aagttgggtt caattttatt
      181 tttgttgcag atcacaaaga tctttttcaa tagttctgcc tgcgcatcca attcttcttc
      241 cgttttaacg cgctttgcat caccaactgt taacccgatc atggtgccgc cgatcttatt
      301 caatcgttcg gtcaccaact gcatatcatc caaaattttt tgatgttcat ttttattcca
      361 catgtcaccg tagtacgaag tgcctgcgac cggcaggttg taggtgtgga tgagatccgt
      421 gaacctggat acagcgtcat tgtgccgcaa gaggatctcc attatttcaa cgccttcaat
      481 gcctgcgtat tttaaatcgc tgaaaacatt ttcgagtata gcggtgcaat cccagtcagg
      541 cggataacgg cttgcgtaca cccaaagatg tgcgtagacc gggattttat tctccggaaa
      601 aaaatctttc cccgaattcg taagaactac ccctgcggcg aatgaagaag tcgtttttag
      661 aaaatttctc ctggatggca tttacaaatt ttcaatattc aattttcaat gctcaatgtg
      721 caatcacaaa tgttcaacca ttcctctctt tacggtaacg caaacgccac ataactatca
      781 ccggcctttg tgcccagctt ttgtccgcca caagcgatca caacatattg tttgccgttc
      841 tcttcgtagg ttgccggcgt tgcaaaaccg cctgcaggca actgcgtttg ccataaaagt
      901 tttccatttg ttttatcgta cacgcggaaa taaccatcct tcgtgcctgc aataaacaat
      961 agaccactgg cggtgacaac tggtcctcca tagctttcgc agcctgtctg cggaattcct
     1021 ttcgatttta actcaggcgt ttcgccgagc gtaaccttcc acaaatactc acccgtgttc
     1081 aggttgatgg cattcaacgt tccccatggt ggactgatag caggccatcc gttcttgtct
     1141 acgaatttgc tgtaaccgga tatagaatat gaaactgcgg aatcagctcc gggtttgctg
     1201 ccgagcacgg ttttcttcgg aagcttcggc tgcttttcct cgtcgccaaa caagaaacca
     1261 accacagcct tctgctgatc ttcgtcgagc cgcgtaaacg ccggcatcat ccgtctgcca
     1321 tgtgtaatga ttgcggttac ctggtctctc gaatactttc cgccaatatc aacaagcgga
     1381 gggaagccac tggcaacatt cccgtggcgg tcggttccat ggcacgaagc gcaattcatt
     1441 acatacaagc tgtgtcccgg ggtcatgctt acaccagttg ccttggatga cgacggaccg
     1501 atcgaaattc tccatggcat ttcgctgctg ttcacataca gaattccatc aagatccgaa
     1561 gcggcgccgc cccattcagc acctccgtcc aaacccgggt atattatagt gcctccctga
     1621 ctgagaggag tgaacggtcc ctggaaacgg ctctttcgaa acgagtcgat caaagcctgc
     1681 cggttatctg cataaggatt aatatcattt tctgtgattg tgtgccttgc ataaggagca
     1741 ggtttcgtcg gcaaaggttg cgtaggccac gactgctctc ccggaatatc agaaactggt
     1801 accggcgttt cttttatagg gaacaaagga gctcctgttg ttcggtcaaa caaaaaaaca
     1861 taaccttgtt ttgttgtttg tgataccgca tcaattcgtt ttccattttg cgtaacagtg
     1921 atcaaattcg ggggcgccgg cgggtcgcgg tcaagtatat cgtgatgcac taactgaaag
     1981 tgccaaatac gtttgccagt ttttgcatcg agtgcaagca agcaatttgc aaacaggttt
     2041 tcgcccttgc gattcgcacc ataaaaatca tatgcggccg atccggttgg aacataaaca
     2101 atgccgcgcg cacgatctac agacataccc gcccagttat ttgcagcacc cacgtctgaa
     2161 gtatttttat aaacatcttt aggccacgta tcataaccat cttcgccggg ataagggatc
     2221 gtatggaaaa cccatgcgag tttccccgtt cttatgttga atgcctgtat gtggccgagt
     2281 gcagcatcgg tgccttccga aacccttaac ggcatgatga tgagatcctg gtaaacggtg
     2341 ccaggagtat ttgagatcac catcttgtct tcgctcgttg gtcccaggcc acttttcaga
     2401 cttgttcggc cgctgtcgcc aaaagtcggt atgggcttgc cggttcgtgc gtcgagtgca
     2461 tatagccatg gaccgctggt ataaagaatg cggttatcat caccgtcttc ccagtaaacc
     2521 aaaccgcggc tggaagcgag attgtcgggt ccttcggttc ttcctttcca gatttctttt
     2581 cccgtagccg catcgaccgc gaacggcctg gtggcagcgg tcatcccata taaaacgccg
     2641 tgcacgatta ttgggttgca ttgcatctgg cccgagtcgc cggtatgata tacccaggct
     2701 atccttaatt gctgaacatt atttttattg atctggtcga gcggtgagta atgatttctt
     2761 tcgggtccgc ctaaatattc cgtccactca tttgacccat atgaaggctt ctcagctttc
     2821 tggttacatg ccgataaagt tgcgagcgaa acgcaaatgg cggcaactgt gtatttattc
     2881 atgcgaatta aaactgttgg tgtaagatct ttgaaaatac agattaaaga tcagctattt
     2941 gatccgtttt atgagcgcat ggcaaattgc cccgaacctg atgcatgaaa aagatcagac
     3001 ggccgaaaac aacaaagatg ctcatctaat accccggatt ttgcttcaag gcagggtttg
     3061 ccgttataac ggtttccggt atgggaaata attcatagtg tttatccgga tccggttctt
     3121 tttcccacca cgcgtcctgg aattttccaa aacggatcag gtcttcgcgg cgaaacattt
     3181 cgtaagcaaa ctcacgtccg cgttcgttca gcaactcgtc catagttaaa ctactggttg
     3241 tgtacttctc attgttgaaa tcctgcgctg agaaagcgcg ctgcctaacc tggttgacga
     3301 gatcaacggc ttcctgtgaa gcggcgccac cattcaaccg cattaaacat tccgccttca
     3361 tcatcaggat gtctgcataa cggtatacga ccatgtcatt gttcatgttt acaaatccat
     3421 tgctaccgta acttccataa ttgtactcga tctggtattt aatgttcatc acgccttcat
     3481 catctcctgc attgaaaaga tcgtcgatct gcggcgttat gaccattggg tcgccttcgt
     3541 aatcgtacac cggctgtacg tctccgtgct tatcaatgta agtttgcgga cccacgatcc
     3601 attggttgat gcgataatca ttctttgaat aaagatcaaa aaacgattcc tgcgtgctga
     3661 tctttctcca cccatagtcc acagaaaaat tgtcacaata ctttgcgttg attatgttct
     3721 cgtgaatgtt ctgttcaata aaattgaaat tttgtgcatt gtttgcatcg aacgggacca
     3781 caaagatatt ttcgtcgcta ttttcgttgt gcacgaggaa tggatcattc cagcgcgcat
     3841 cgagagaata tttccctgaa ttgatcacgg cattgcaggc atcgatgcaa tcctgccagt
     3901 gttggtcacc cgtcatcgct tcggcgttga gatacagctt tgcgagtagc gcataggcgg
     3961 cagtttttgt aaaatgccca taccagttgt cgtcgccttt ttcactcagt gcgtcgatgt
     4021 tatctttaat ttctttttcg ataaatgcaa atgcttcagc cggcgtgcta ttagtcgggt
     4081 ttggtacgcc cacgtgttca acgattggaa tatttccaaa ttcgttcaag gcccagtaat
     4141 aatgtaaagc cctgatcatt ttcacttccg ctatcatttg ttctttgctt accggcaagt
     4201 tcattttgct cacatcgatg ttctctatgt tgtcgataaa actattacag tagccgatct
     4261 cctggtaaag gtcctgccac tcatacaata tccatgcgtc cggtgatgcc catgtatgtt
     4321 gatgaaagcg caaccactgg ccttcctggt caatgtaacc atacaaaaca ggcacacatg
     4381 cttcatcggt tacaaactca acgtcctgga aatggatctg gtaaatgtga gtctgtaaaa
     4441 aactatacgg taacacatac cctgcgacca cctggtctgc ggtttgatag aaattgccgg
     4501 gcgtgtcctg gctatagacg gtttcattca atttttttgt acagctaaca cctgctacaa
     4561 ctgcaacaaa aaaaagtaac caccacctgt attcacttat tcttttcata gctgattttt
     4621 tgagcgatta aaatttaaca tccacaccaa aagtgaaagt tcttgtgctt ggataataat
     4681 cgtaattaga ttcaagacca gggccgtcat cagtttcctg cgagtaatca ggtggataaa
     4741 aattgatctg cagttcggga tccgttcccg aaaaacccgt tatcgttaac aggtttgcgg
     4801 cagtaaaata cagatgcaca ttttttatgt aagccgatct tagaggaaac gaataaccaa
     4861 ctgtcacgtt gtcgaccttg aggtaagaac cgtcttcaat atagtaactg gaaaacgtcg
     4921 gcgcgtcatt tatttgagta ttgagcgcag aagtgaagag attatttctt gcataatacg
     4981 tccagttctc atgaaacatt ctttttgcat tcactgcttt gaaaccggcc gcacctttta
     5041 gcaacacgga tgcgtcgaac ctgccgatgc tgaaatcatt ggtcaggcca aaagtgtatt
     5101 tcgggatgct gttgccgagg taaacataat catccggtcc aagggcgttg cgcccaacca
     5161 attttccgtc tttgcttatg aatctccatt ttccgctttc atttatttcg ccaaattggg
     5221 ggccataaaa aacggcaaca ggctgaccgg gtgcaagcct ttggatcgtt acgccctctg
     5281 taactcgtgt gatatcgata gcggttccga agaattgatc actcgttaca gacactattt
     5341 catttttgtt atacgcgaat gttgcggtgg cattccaatt gaactgggat cctctgaaga
     5401 gttttgcgtt cagcaataac tcaacgccct tgttgtccat tatacctgcg ttcgcgaaaa
     5461 tcgttggaaa tatttgcgaa ggcaactggg cactgtagtt gcctaaaaga ttctttattc
     5521 tccggtcata gagatctaac gaaccgttta gccagccatc tttcaacagg ctgaagtcaa
     5581 cgccgatatt tgtttcatat tttgtttccc actgcagcag tggatttgca tttgtggttg
     5641 gcccataggg gaggatccac acgccattgt ttggatcgcc caaataactg ttttgcgttc
     5701 cgttataaaa agggccaatt gtggcaagag actggtaagg gagcaacgcg ccctggttac
     5761 cggtaactcc gtagccaacg cgcagcttaa gaaatttgat ggcattggaa ttcatcataa
     5821 aattttcttt gctgatgatc cagcctgcag acacgccggg aaaatttccc catttgtttt
     5881 ccgcccctaa cacagacgct ccctctcttc tgagactaac gttcaggaga tatttttgcc
     5941 tgtaatcata gatcgcgcgc ccgaaaaaag cgaggatggt tctttcagat gcataactcc
     6001 cgacaaatac gccgctttgg ctaacgtttg gatcggtgga acttatcccg gtaccggcgc
     6061 cgaggttatg atacgagtaa gcattcgtaa gaaaattatt attgccggcg ctgaagccct
     6121 cattaaaaat gtcttcataa gaatatccag caacaacatt caggtgatga tcgccgaaac
     6181 ctttatcata ggccagggtc gtttccaata cgttgtgtgt ttcattgttt tcagatctcg
     6241 atgcttgtcc attagtttga ttgatcagtt gaaaataatc attgatctct gagaacgacc
     6301 cgtccaaaat attgttctta attaatgaat atgtaaccgc accggtgagg taaggaagaa
     6361 aatggtaagc cgcattcacc gtgccaagaa atctttgctc tttcgtgtta tatgtgttct
     6421 gataaatatt cgctaccggg ttccacatca aatgatattg cacatcgtgc tggaaaaaag
     6481 taccatttga attgtacaca ggataagtag gattcatatt cagcgattgc gcgatagcgc
     6541 cgtaattcgc atagtccctt gtatcaaatg agctgaccaa tatcaacccg aagtccagtt
     6601 tatcgtttat agcttttgtg ttgaggcgga tagtgccgtt tacgaattcc ctgttagacc
     6661 tgagatcaat cccctggttg tttcgataat ttatcgagcc gtaataagtc gaccgctcgt
     6721 tgccgccgct cacggaaagg ttatgcgagt ggctgatagg agttctcgta actgcatcaa
     6781 accagtcggt gtttccgccc tggtcgtcaa cctgcaatcc gttgtcttgt ccgaatttga
     6841 tgtattgctg agcatctaac acatcatatt ttttggcgat cgtagacgtt gtaacataac
     6901 cgctgtagtt tacttctgtt tgccccggac gtcctctttt tgtagtaatg atgatcacgc
     6961 ctgcagtggc gcgcgacccg tagatcgatg ccgcagaacc atctttcaaa atatcgattg
     7021 aagcaatatc gccgggtgcg atggtttgca aatcgccgcc gggcacgccg tcaattatga
     7081 tcaaaggctg cgagctatac ccggtaactg tcgccggccc acgcagtgaa aaatcgacgc
     7141 ctgaatttgg atcagctctg ctcgtattgc ttacgttcag tcctgccact tttcccgcca
     7201 ccaattgtat gggatcattg atttggcccg aattaaaatc ttcagcgcgc acggtagcaa
     7261 tagcgcccgt gaccgtctct cttttttgcg tgccgtatcc gatcactaca acttcgttga
     7321 gcgaattaac cgacggtttt aagcggataa gtattgaatt gtttcccgca gagtttacca
     7381 ggatggagtt ttcattgctt gtttcataac caacatacga cgctgtgatg tggtaagtag
     7441 ttcccggttt taattgctga aacgtaaaaa tgccggattg agtagtaacg gcagtgtact
     7501 tctctttacc ggtcgtggct gtggctgtta ttgttactcc ctgcaatagt tcgccatttt
     7561 cattcatcac cgttcccgta actgccgcgg gctgcgcgat tgcaaaatgg tggaataaaa
     7621 aaaagaggga aacgagccag agcttttttt gcgttgaggt gattgtgtgg tttgttttca
     7681 tatcgcattt ttatcccgtt cgtaatcgtt tcatttaggc ttagtgatcc gtttcatttt
     7741 aggcttagtg atcaaaaatt cattttgctg gcgggtgaca acgaggttat tcatttccgc
     7801 aatagcgttt aagataaccg agaccgaatc ggttctcaat actttgccgg agaagtgcat
     7861 cgtttgtagc accgacgtgt catatgttat gggtacgtga tagtactcgg aaagggtgtt
     7921 catcacttca ggtaaggttg tgttactaaa atctaaccca tccgccgttg cattaaaggt
     7981 aggtgttttt tcctgcgaag ttcttgggac gctggctgat gatggttcaa ttttttcaac
     8041 gacagcaagc agggttgaag gattgaacct taatttctga ccaggctcga ggtagatatc
     8101 tttattccat cgggtcaccg ttttatcagc cggcgttatt actactattc cggtaaacaa
     8161 tttaacgacg atatcatttt cagttccgct tgcctgcaca gtgaagctgg ttcccagcgc
     8221 tgtagtagcc agggaaccgg cgtatactgt gaacggtcgt gttttgtctt ttgcaatttc
     8281 aaaaaaagct gcaccatgaa gccaaacttg ccgcttgttg ggcgaaaagc tatcgtcata
     8341 gtccagcgag gagccaggag caagctctac aatggatccg tcctttaaaa cgatctccat
     8401 tgtatctttt ttggtgttct ccacggtttc aaggtcagca acggcacttg tatgtatatc
     8461 ggcgtttcca ggtttagtat tttctttcgg cgtgaataaa acgtacccca caccgatcaa
     8521 tgtaacaaca gcggctacag caatactgcg cttcagccac agctgcctgt cttttttctt
     8581 atggtcttcc cggatattgt tccagatctc atcccaaaac tgttcgggca tgttggcggc
     8641 agggactacg gaattccatt cataggtgct taaatattct tcaagcaaat ccggatgtgc
     8701 ccttaagtat tcagccactt gcctggcttc atgggctgtg cattgttttt gaaagaacct
     8761 cgcgatcaga tcctgatgca cttaagatag ttgtaataga aatacgacgg ccgcccacaa
     8821 tttcctccga aacaaaaaaa aatttcggtt atttcataac cactgtaaca atgaacgcga
     8881 gcagcaggct tacggtccta agatgtttta aggcttttgc gagattgttg tcaactgact
     8941 ttacagaaat cgacaatatc tcagagatct ctttatacga ataaccttct aagcggtgca
     9001 attcaaaaac tctttttcga agtggcggca gccccgataa caatttttgc aagtatccgt
     9061 gaacatcatg atcagcaatg ctggttacag ccggccttgc gcagcgaact ttgcttatcg
     9121 attctttgat gcgttgcaat ttattttgcc ggcgcagatg gtcgataaga acggtgcgag
     9181 ctatgtgaaa tatttgttgt tctaaaagat actccgccga taacgaactt ttgtattgcc
     9241 acagctttaa gaaaacagtt tgcagaagat cccgcgcatc ctcggaagaa ttcgttttct
     9301 ttaaaaaata agcgtaaact ttttcacgat gttccttgta aactttttca aaagcagcgg
     9361 ggtttccgtt cttgatagca ttgatcataa gtctatagcg gacaggtgtc agtagtcaaa
     9421 cctataattt ttttccgaat attctttcat gctttcgcaa aaaatatttt tcgattgcag
     9481 gaaatattta ctcacgaccg tataaattca atttatgaat gatcgcttca gttcacgcag
     9541 gaaatttgta aaagacacag caaaaggcat cgggctattt ggaatgtctt cgtcgttgca
     9601 ggcagcatta tttgctgcgc caaaaatgaa aaagaagatc gttatagtgg gcggtcatcc
     9661 ggacgatcct gagtgtggct gcggtggcac tgccgcctgg ctaactgcga tgggacacaa
     9721 cgtaaccttt atgtatttta caacgggtga agaaggtata gaaggaaaaa catgggaaga
     9781 ggcggcagcg ataaggaaaa aagaatgcat tgcgtcgtgt gagatcctaa atacgaaacc
     9841 gctgttcgtt ggacaaatag atggcgaaag tgtattgggt aaccctgaga tggcgaagtt
     9901 tgagcaactg ctttacgctg aaaagcccga tatcgttttc acacactggc cgatcgactc
     9961 gcacaaggac catcaactcg cgagtgtact tacgatgcaa tcatttatgg aagcgtccga
    10021 aaaatttcag ctgtattttt acgaagtgtg taccggttac caatcttttt tattcaaccc
    10081 aaccgattac gtcgacatta gtaaatatga agaacaaaaa atgaaagcac ttgcgtgcca
    10141 tgcaagccag gacattgttg tggatggaaa gtatacacaa aatatgatcg attgcggcca
    10201 tccggcgatg caggatttca ggggaagaga gttgggtgtt cgcgctgcag aagcattcgt
    10261 gcggtttaca ggaagaggct ttggtgtgat tcgcgaaatg gctggctgaa cttcttttat
    10321 cgaacgtatt gtgctattaa agttgaatca aatgatcgcg gtccttgcag taaaatagtg
    10381 tccaaatttc atgaagggga ccgcatgtct ttcccgcgaa tgcgcgaatc tgctaacttt
    10441 agtttatgcg atatggaggg acagtctatg tcttaacaaa tgtgcatcgt gaagtgttgt
    10501 acattggcgg gattgacctt tctacaagaa ttcccgggta tactaccaag ttctatccaa
    10561 attcattcaa cgtaaaatgt aattgcaaca agcttgttat tatgagacat ttggcagaat
    10621 aaagcatgca attgcaagag aaaaacaaac tgaaaaaaaa tgaatcgatc tttgaaggat
    10681 aaattgattt cggatttcaa tcccggatgg aaagatttat ttattggcgt gtaaaactac
    10741 tagagtatat gcccggtcgg gctgggcatg acggcgccgt ggtagtcata tgttccggca
    10801 aaatagatga aacgaatttt tcgtggtcga tcttaatggc acgttttatc gattgtcggt
    10861 ttagttattg tcaaacctat ttgtctcaat gcgcaaattg ttcgggatag ttttattgct
    10921 cgtatttatc accacgcacg gtgttgcgtc gtcgataata ctgcatgcga aaagtgcaac
    10981 agtttggctg ccgaaacaaa ctgtcaaggg ggaattaatt gattttagcg ctcggactgt
    11041 gactgttcat ttcaatgatt ctattttttc ggttcaagtg gatcatgatg aatttgcaat
    11101 atccatcttc ttgaagaaag gcacgaatat tatttgcgtc gaggcagcga atgaacagca
    11161 gcacatcaca tctgacacgg tagaatttaa attgggttac acgccgcttc ctgtagttaa
    11221 gccgtatgct acgcgtgcgg gtgataaaat ctttttgcac gcactggtaa aagaaaatcc
    11281 gtatgatgtt ccaatatcgt tcacatgggc gagcgataaa aacaatccag cgcctgcaag
    11341 cattataaac acgcacgaca gtgctgcaag ttttacactg ccgcgaaaga aaggagatta
    11401 ccgtttccat cttacggtgg tcgcgggaga tgatacagcc atgttcgcaa cattcgtcac
    11461 tcgaactgac agcatacatt gttttaacat cgaatcggac cacgcggcgt ggatcgactc
    11521 ggcggttatt taccaggtaa caccatccat attcgtcaaa gatgggcact atgatgatat
    11581 cacgccaaag cttccggaga taaaacaatt tgggataaat acaatttatc tgcagcctgt
    11641 gtttgaaaca catgccggcg ggcagggata tgatattaca gattattttt ctttgcgtaa
    11701 agacctcggc actgaggcgc aactccggga tcttatcact actgcgaaaa gcctgggtat
    11761 ccgagtgctg tttgactttg ttccgaacca cacgtcagta tttcatcctt atgttgcaga
    11821 cgcggttctg tacgggcgcg attcacatta ttatgatttt tatcagcggg cagatgacgg
    11881 ttcgaaatat tcgtcactct ataaacggga tgactccggc ttttaccact atttctggaa
    11941 taagctcgtt aatcttaatt atcagaatcc ggaagtcgag caatggatca tcgaggcatg
    12001 caagtattgg ttgaaaaaat ttgatattga cggctacagg ttcgacgcgg tgtgggcggt
    12061 gagcgcaaga gatccttcgt ttgcgaaacg attgcagctt gaattaaaaa gtataaaacc
    12121 cgatattctt ttgatcgctg aagataaagc ggcaaacgca caagtttttg aagccggtta
    12181 tgacgctgca tacgactgga cggcggatac atcctggata tcacattgga gctggcaata
    12241 tcactatgat ccggcgcaca atccaaccat ctttaattat ccgaatgaaa acgaaagagg
    12301 caatatgctt aggcatgcgc tttttcaaaa tggagattcc atacatcttc gtttgcggtt
    12361 catggaaaat aatgaccaac cagcttttat aaaagaccac gacgtggcct gcacaaaaat
    12421 ggtcgcggcg ctgctgtttt cgctacccgg gattccttta ttatacaacg ggcaggagat
    12481 cggacacgca gccaaagttt attcaaaggc gccggtgttt caagctgata aaagtatccg
    12541 gtcacttgac tcggggggct tatataatta ttaccagaaa ttgatcgcgc tacggtcgcg
    12601 gtataaaagc ttgcgcggta cgcatatgaa agacctgcct gtaaattgtc ccaacaatgt
    12661 ggttgctgtg tatagatggc aggaggcgga aaaatttgtt gtgatcgtca gcctgggtgg
    12721 aaatgctcag caggtgtctg ttgacctgaa tgatgtgatc aagcaacaaa ataaaaactt
    12781 gtttttcacc gacgtgttaa ccaatgaaac gtttacctcc tcttctttgt tgacaatccg
    12841 aatgcagccc caaactgcaa gattattatt gatcaaggat tgacgtgtcc tgttaacaat
    12901 taaaaattca acgaatgttc aacttagtga aacttcgtgt ctcgctgcct tagtggtttt
    12961 gatcttttga accaccaagt ctccaaggca cgaagacaca cgaagaaaac taaggtggca
    13021 ttttagaatg aatcgcacaa gactgtaagg attaatattc ttcacaagcc ggcgttggtg
    13081 gactaaaatt actcgccggc acccggtggc gagtcgccgc cttttttcag gcattcttca
    13141 accgtagaaa gcagttcgcc gccttcaaaa ggtttgcgta tatatccaac ggcgcccatg
    13201 tcaagaccgg cctgtatttc ctttttttca acgctggcgg ttatgaagac aaacgggatg
    13261 cgggaggtgc tcttattttt tttgagttgc ttgattactt cccagccgtc ggcctcgggc
    13321 atcatgatat cgcataagat tatgtcgggc agtttgtctt tcgctttcgc gataccaatc
    13381 actccgttct cagcaacttc caccaaataa ccttccattt caagtatctc ggctgtgttt
    13441 tccctgatct cgaggttatc ctcgataagt aaaactttag tcatatcact tgccattttc
    13501 tggaaattga actgtgaaga tcgtccccga acccgtcttg ctttcaaagt taatactgcc
    13561 gtgcagcagc tcaacatatt ttttaacgat actcaggcca agcccggttc cctggatatt
    13621 caccgtgttg tttgccctga aaaaattttt gaaaagattt ttttgctcct gttcagggat
    13681 acccatgccg ttatctttca cagcaataac tacatttttg tcgtcgactt ttatggaaac
    13741 aaaaatttct gtgttctcag gcgaatactt gatcgcgttc gacaacaggt tgaacatgat
    13801 gttgcgaagg atcttcctgt cgagtactat ttccttttcc ccgctgtgcg aataaatcac
    13861 tctttgattt ttcttcttaa gcatgttatc catctcttcg ataatatcct ccataaattc
    13921 acttatgtca aactgtgacc tctcggcttc aatttttccc tgctccagct tatcgagtga
    13981 aaggaaattg ttcagaatat ctgtgagatt tcttacagag gctttgatgc gttcgatatg
    14041 tttttttcgt ttttcgtcgt gttccggatc tttgtatgtt tccacgagcg aaatgctgga
    14101 aagcaccgca ctcaacggag tcctgaattc atgcgatgcc atcgaaacga aacgcgactt
    14161 catctcactc aattcttttt cacgctccag cgcttctgtg agttcgaacg ttctttcgat
    14221 gactttcttt tccagtaact catttgcttc ttttaattgc tgctccattt gtttccgctc
    14281 ggtgatgtcg gtgacgaatg caactgcaag catctcgccc tccagttggt agtagccaag
    14341 gcttatttcc acaggaaaaa catgaccctc ttttttttgc gcaaacaggt cgatgccacg
    14401 gcccatcggc cttgcttttg gtttgtcaaa atatgtcgtg cgatgttgaa catgtcgctg
    14461 ccgcagatct ccggggatca gcatctccaa aggatggccg atcaattctg cgttgttata
    14521 gccaaagagt ttttctgcag ccgggttgat aagttcgata aggccgtcgc ggcttatgac
    14581 gagaatggca atagtggcgt attcaaaaag ggctttaaat cccgcttcgc tttccaacga
    14641 aatttctttc ataacgatca ttagaaaaat acggacgaac cattttttat ccgcacatta
    14701 accggctaaa aatagcaatc gcatcccaaa tctaaaaaga atgtcattct gcaaaaaaaa
    14761 atgaagtgaa atttatcgct catggtaagt tgccaccgta gctgttcgac cattttgaaa
    14821 attctataag cggttacaat ttcgatgcag cgtgtaatat cttcaaccaa tgaatgctcc
    14881 ccgccctgtt gccaaaataa agcactggag aagcgacaaa ctgttggatg tcgggttttc
    14941 gagctattca ttaacgcatc acagctttcc ccggcatttt cacgaccatt acgtgatcca
    15001 gctcgtagta aacggcgcgg atagattcta ttgtagcggg aacacatatc aggcggccgc
    15061 aaacgagctc gtgttcatca accccggtga agtacatacg ggaagtgcgg tgggtggcaa
    15121 gacgctggtt tattatagca tgtcgccgag cattgaacaa ctccaacaaa ttgcgtcgat
    15181 attggagaaa ccattacaaa acgacttatc ttttgcaaat cagtcgtcca accggtctcg
    15241 cctggcgaat aaaatgagat cactgtttca tgcaattgaa gaggatgcgc agagtttgct
    15301 gtctgaagaa ttgttcctgg acttcatgaa cgatcttctt gataatggaa aaggatacga
    15361 tcaaactcca aaaagatgtg acgagcgcgt ccaggagttg attaacatta tgcgcgagtc
    15421 attcaccgag ccgctttcct tacaacaaat gtcggaagtc acaagaataa gcccttttca
    15481 cctgattcgt ttgtttaaag cctcaaccgg cctgtctccg tatgaatacc tactaacact
    15541 tcgcgttgaa catgccagga aattattgac gaagggccga agcgtgcagg acgctgcatt
    15601 agaatcgggt ttttatgata cttcgcattt gaaccgcatg tttaaaaaag tttcagggtc
    15661 gagcccgaaa attttccgct catccaaatg acaatatcgt acaatttttt ttcgccgcaa
    15721 ggaagttgtt ttgtaatgcc gcgcatgtac ttgtgattcg cggcactaat ctctcaaaaa
    15781 atcaaaatca tgaaacgtac catcaaatat gcagtcgccg tgtctttaat gtgtactgtg
    15841 tttgctctga cggcaaaggc gcagcaaaaa aattacaacg tcgc
//
LOCUS       DASQJI010000422        17997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1431420,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000422 DASQJI010000000
VERSION     DASQJI010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17997
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431420"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..988
                     /locus_tag="VEV83_11960"
     CDS             65..988
                     /locus_tag="VEV83_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HYK45880.1"
                     /translation="MSITVVGSMAFDAIETPFGKTDKIVGGSATYVAYAASNFVKPIQ
                     QISIVGYDFPEEELNALRARGVDTEGVVIVPDKKSFFWSGRYHLDMNTRDTLITDLNV
                     LADFDPKVPEHYQDSEFLMLGNLVPAIQREVINQFIDRPKLIVMDTMNFWIETAWEDL
                     EEVFTMVDVLLVNDSEAREISKEFSLIKAARKILRMGPRFLIVKKGEHGALLFHDDSV
                     FFAPALPLEDVFDPTGAGDTFAGGFIGHLAKTQDISFENMKTAIIVGSAMASFCVEKF
                     GVQRLKEITKHDIDARLQEFVQLVNFDIALV"
     gene            1089..2735
                     /locus_tag="VEV83_11965"
     CDS             1089..2735
                     /locus_tag="VEV83_11965"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYK45881.1"
                     /translation="MLIYYFILHALVAWSCNLVQHKEQEQHQQPSIQPDTTITKQTSF
                     NNLFVDTNQVVSFLSNHPAYQKFQQQYADFYRQRNYEFAWFDSSGISEQAYNFINLLG
                     NAVNTYNDSSLYNKELVNEVDAFKKDTTDTLIHKMPDITETELALTGQFFMYASKVYN
                     GADIDVEQLGWFIPRKKVDLSLLLDSLIANKSGVQSTEFPISDEYKKLLDFLPVYNNI
                     AQSERWDTIAFPAKALHKGSKSSIIPVVKKRLYGLGDLTEQDSTAVFDTALLNAAKNF
                     QARMGLKADGVIGKAFLKELNVSPQQRIQQILINLERLRWMPKMNDSAMIIVNIPEYK
                     MYVYEGGQLQFDMDVVVGASATGTVIFTGNLKYIVFSPYWNVPASILKKEIVPAMSRN
                     PNYLAEHHMEKYGTGAEGLPLIRQLPGPDNALGRVKFLFPNNFDIYFHDTNDPGAFNS
                     SKRNISHGCIRLSEPKELAMYLLRNQPEYTEERIDSLMDLDKEKWVTLKNTVPVMISY
                     YTAFVDDSGRLNFRNDIYKHDSAMAAKLFASPLTDTLVNQ"
     gene            2814..3302
                     /locus_tag="VEV83_11970"
     CDS             2814..3302
                     /locus_tag="VEV83_11970"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYK45882.1"
                     /translation="MEQQSLLTDIEISLVHATTGQRFANHLVDLVVYDLVRLFIINPL
                     VTSGNAIMYSAFSNPEAIMLINQLFFFVFYMSFIFLQEAILKGKSIGKFVTGTRAVNM
                     DGSFISTKTALLRSLSRIVPFEPLSALGSPPRPWHDRWTNTYVIDEKKSVLNPEQRVQ
                     IS"
     gene            3432..4580
                     /gene="galK"
                     /locus_tag="VEV83_11975"
     CDS             3432..4580
                     /gene="galK"
                     /locus_tag="VEV83_11975"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004335 - galactokinase activity [Evidence
                     IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HYK45883.1"
                     /translation="MVDTVKETFRERFATEPLIIRSPGRVNIIGEHTDYNEGFVLPGA
                     IDKYIYIAVSTRDDNRIELYAGDFQETYACTIEDVAPTKQVWPNYILGIVDQLKKSGF
                     ELKGFNAVVDGDVPIGAGLSSSAAVECATVFALNELFGLGLNKMEMVKLAQRAEHAFA
                     GVKVGIMDMFASMFGKKDHVIKLDCRSLEYEYVPFHLEKIKIVLLNTNVKHSLASTEY
                     NTRREQCEQGVHWISEHRPGIKSLRDVTIEMLDEFVLPKDRLIYTRCKYVVNEIDRLL
                     QACQDLKRDDIKALGKKMFETHDGLSKEYEVSCKELDFLVDNVRNNDAVIGARMMGGG
                     FGGCTINLVREDAIEGLISELKKTYEREMQLPLTAYIAEIESGTIFAA"
     gene            4697..6076
                     /locus_tag="VEV83_11980"
     CDS             4697..6076
                     /locus_tag="VEV83_11980"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45884.1"
                     /translation="MKKPTHLHASASVDIRFFFFVVSLILFSVGCRKQSLSDINLRSA
                     SAAQSQISGTPNIILILGDDIGYEIPTCDGGQSYSTPNIDQMAANGTRFTQCHASPLC
                     SPSRFMLMTGKYNFRNYTEWGIMDKNERTMASFLQDEGYKTFVGGKWQFDGGDRSIHS
                     LGFDDYIVYLPFARQDEEQDGSRYKNPHLYVNGDFLADSLTLNKYGEDIVCDSIIQFM
                     AHNASAGEPFFVYYPMMLCHAPFSPTPDDSEFPAWDPSLGTSDADFFPSMVTYMDKKI
                     GQVIHAVDSLGLAQNTIILYMGDNGTPEKITSIFDGYEIIGRKGRTIEYGTHVPFIAY
                     QPGFVPAGVNDDLIDFTDFLPTIADIAGAGIPNNFKTIDGLSFYSQLLGGTGESRSWI
                     YCYYAPHQNNIPKQWAQSLTYKYYDDGRFFNIISDIREQNPIPDSSLTTDEMLIKQQL
                     FEVIDGMQK"
     gene            6277..7623
                     /locus_tag="VEV83_11985"
     CDS             6277..7623
                     /locus_tag="VEV83_11985"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45885.1"
                     /translation="MEIPKRCSVRGNVINRTLFLAFGLLLFFSCKKQFDAGDKQPPPP
                     PSDKTNIILILADDIGYEVPTCNGGQSYETPNLDKMANEGMRFTECHSTPLCSPSRFM
                     FLTGKYNFRNYTAWGQMDVSQRTIANMLKSAGYATCVAGKWQLDGGDASVHAFGFDSY
                     CLWNPYFAGVGGSRYKNPHIYEDGGYWSAAKSEGNYGEDVFTNYVLNFIETNQKASKP
                     FFVYYPMCLSHAPFSPTPDDADYAAWLKGNDPKYFKSMIKYMDKKIGQIVDKVNELNI
                     ANNTVILFTTDNGTPDSIASEYDGDVILGGKSSTTEYGTHVPLLAYAPGLVPHMVNDE
                     LIDFTDFLPTAADIAKISEPDTYGVLDGTSFYQGLTGHSEHARSWIFCHFDPHPGNDT
                     VERYVQNTIYKYYEDDRFYDIVADILEEHPIPDSLLSVDEQNVKSQFKDVLGRMHN"
     gene            7764..9128
                     /locus_tag="VEV83_11990"
     CDS             7764..9128
                     /locus_tag="VEV83_11990"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK45886.1"
                     /translation="MRRVENRFKTTIKITCLLLASLLLIVEESCRKEGDDFSPLVLAP
                     PGKPNIIVILADDYGYEVPGFDGGQSYSTPNLNSMAQQGVRFTQCHSTALCSPSRFML
                     LTGKYNFRNYSTWGVMDTSQRSFANMLRDAGYATCVAGKWQLDGGDTLIRHLGFDNYI
                     VWEILGSDEDVEKGSRYKDPLLYEDGAYLPADSVKDKYGEDIFTNYILNFIQASHDKN
                     KPFLVYYPCCLTHSPFCPTPDDAEFSTWDPNNVFGDTKFFPSNVSYMDKKIGQIVSKL
                     RDIGVDRNTIILFTGDNGTSDKISSKFNGYYIQGGKGHTTEYGTHVPLVVYAPAFIRS
                     GVNDDLIDFTDFLPTLADLAHIQRPTTYGVLDGVSFYPAIADPWSSPRDWIFCHFDPH
                     SEGNNQVIRYVQNKNYKYYEDGRFYDIVRDILERDPIPDRQLTAEEKTVKQQFINVLG
                     EMHN"
     gene            complement(9137..9634)
                     /locus_tag="VEV83_11995"
     CDS             complement(9137..9634)
                     /locus_tag="VEV83_11995"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HYK45887.1"
                     /translation="MNRSSHLPLAYILSFALLPAVFLPLFSIAQLSGKVISVTDGDTF
                     TLLTANKQQVKVTLFGVDCPEIGQDYAEQARTYLGDLIFFDTVKVAIRGTDESGATLG
                     IVTLFKMNVNERMLQQGFAWHDTRYDTNPAWSAYAEKARQLKKGLWSSGSPIPPWVWK
                     NTHKN"
     gene            complement(9673..9746)
                     /locus_tag="VEV83_12000"
     tRNA            complement(9673..9746)
                     /locus_tag="VEV83_12000"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9710..9712),aa:Asn,seq:gtt)
     gene            complement(9818..11008)
                     /gene="hflX"
                     /locus_tag="VEV83_12005"
     CDS             complement(9818..11008)
                     /gene="hflX"
                     /locus_tag="VEV83_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HYK45888.1"
                     /translation="MIERRQNVDSAEKAILVGVVQKGQTEAEVQENLDELAFLAETAG
                     ALSQKRFIQKLAKPDSRSFIGKGKLEEIKAYLANHEARVIIFDDELSGSQITHIEEVL
                     DVKTIDRSDLILDIFARRAKTARAKAQVELAQYQYILPRLRGMWKHLERLGGGIGTRG
                     PGETEIETDRRIVRDKISLLKKRLKEIDKQSFTQRKERGELIRVSLVGYTNVGKSTLM
                     NLLSKSDVFAENKLFATLDTTTRKVVFENTPFLLSDTVGFIRKLPHHLIESFKSTLDE
                     VREADILLHVVDISHPQYEQQMGTVNKTLQEIDAFDKPIVTIFNKMDVYEERTFDEWL
                     NVDAKKEILKDLEERWELATNGNAVFVSATERKNIATLRDRILEKVRILYKERYPYKT
                     EYLY"
     gene            complement(11071..11823)
                     /locus_tag="VEV83_12010"
     CDS             complement(11071..11823)
                     /locus_tag="VEV83_12010"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK45889.1"
                     /translation="MKKSISLFFLIILAVIAKSQDSTIHTTQPTPKKDWAKLDLSTRA
                     NDHFMIQYGYDGWPSLPDSINTSGFSRHFNAYVMLDKPFKTNPSFSVGFGLGIGTSNI
                     FFSNTYVNLKSNTATLPFTNVSATNHFDKFKLVTGFVEVPIELRYVMNPVQPDKGFKA
                     ALGVKGGFLLSAHTKGKNLVDSTGRSVYDDKYIAKESDKKFFNTTRLAVTGRLGYGHI
                     SVDGSYQVTNVLKTGAGPAINPWSIGLTLSGL"
     gene            12018..12380
                     /locus_tag="VEV83_12015"
     CDS             12018..12380
                     /locus_tag="VEV83_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45890.1"
                     /translation="MKILVVEDDIIMLASIEHQLRQEGFEVITATDGRDAMLAFEKQN
                     PDLVITDILMPLTSGLEFLNMVRTSGGNIPVMVLSALDAEDTVIEAFNLGADDFLTKP
                     VKPGELPVRVKRLLKKER"
     gene            12465..12926
                     /locus_tag="VEV83_12020"
     CDS             12465..12926
                     /locus_tag="VEV83_12020"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HYK45891.1"
                     /translation="MRHLLFAATFLLVLTCDSNTSVSADLPGWPGNIKRIAENLGGTW
                     QLQPVLPSDTATGKTPTITFDLQRHTFTGNTGCNEMKGSFKLKADSLAFTEQIVATKM
                     ICQGYNEKAFLDNLFNTNRYQVKDGVLQLMYNETILSKWVRHADTTTTKQI"
     gene            12990..15026
                     /locus_tag="VEV83_12025"
     CDS             12990..15026
                     /locus_tag="VEV83_12025"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK45892.1"
                     /translation="MKLISVAMAALSLLSVCNISAQNVRPRASAEPGWITKIPVDYKS
                     TSLDAEAEDGYIDLDYEKQVNLKEQSIYVRRSVRIISEAGVQNGSQISIGFDPSYEQL
                     IFHTIRILRDGKAINKLDLARIKTIQQEKDLDNFIYNGTLNAVLFLDDVRKGDIIEYT
                     YSTKGFNSIFNGKYSDVYGTQFTSPFYNIYYKLVVPQNRTVNIKNSNETAAPDVSSTT
                     ASTIYEWRKTNVKAMHIEDNIPTWYDPYPEIMVSEYSTWKEVSDWALSLFPVNAQLSP
                     ELRSKVQQIQKENQTDEARVLAVLHFVQDDIRYMGIEMGAHSHKPSGPNKVFAQRFGD
                     CKEKSLLFCAMLRPMGIEAAPVLINSDYKKTLFTWLPCSTDFDHCTVRVKLNEKFYWF
                     DPTISYQRGNIDNVSYPDYQCGLVITDTTTALTAIPRHTTGSEMIKEIFTIPDMSGTV
                     KLEVITTHTGDYADIARSDFKNNSLYEMQQSYQDFYLSYFDDAKSDSLRYEDNEKTGV
                     FITKEFYTIKNFWKDKNGSKTVSFTPFVIESVLEVPKDRQRTMPFSIGYPANYHEEMV
                     INLPSEWKVKKTSSNFTCPGFEFDKRASFANRQVTLNYDYRSLKDYIDPSEADDYLSN
                     IEKARRQLDYGLSFDDASGEPVDKRNAKRIGIAALIISFVIAGVVWWTQKQPSA"
     gene            15123..15425
                     /locus_tag="VEV83_12030"
     CDS             15123..15425
                     /locus_tag="VEV83_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45893.1"
                     /translation="MKRVLVWCCVTVCLATVSIFGRNSSQQTAPLISNVVSDTVPHAQ
                     DTMNKTYSNKSYRKDSGYNNKYNSNRNMNVDTGSSNRNNMNNPPTRDSLSNKPPQQ"
     gene            15560..16525
                     /locus_tag="VEV83_12035"
     CDS             15560..16525
                     /locus_tag="VEV83_12035"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK45894.1"
                     /translation="MNTSNISNRNQYVLITGATSGFGYEFAKCFAKDGYNLILVARNE
                     TRLQQITDELKQQYDVEVTPLQKDLFERNAAAEIYAKTKEMGINVNILVNDAGQGEWG
                     RFIDTDIERQLDIVQLNVAALVELTYYFLKDMVARDEGKIMQLGSEVSKAPTPLMAVY
                     AATKAFVLSFSEALINELKDTGVSVTVLMPGASDTDFFHKAGAEKTVVYREEGLSTPE
                     DVVLDGYEALMKGESRIISGSKAKMHVMMSNMMPDSATAGNMRGKMEESDKNPQEGRK
                     QSGHQASRIERENINEQTKKSSGDYEKTENGKESIAAKNDSPRSL"
     gene            16538..16774
                     /locus_tag="VEV83_12040"
     CDS             16538..16774
                     /locus_tag="VEV83_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45895.1"
                     /translation="MQAQNFELLVDGVPYMIKATPYDFNGQLRFTVSYNGSEDYIFTR
                     DAEAGQLTAIGTEALDIPDNLEQAISEKLSSITE"
     gene            16892..17260
                     /locus_tag="VEV83_12045"
     CDS             16892..17260
                     /locus_tag="VEV83_12045"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HYK45896.1"
                     /translation="MRLRSAINPARVLIAVFLIAGVVYACNKSTGYGSGNNGGSTGNN
                     ISIKNFAFSVSTLTVNSGTVVKWTNNDATAHTVTADDGSFNSGELASGQSYTHTFDLT
                     GTYAYHCTYHPVMTASVVVK"
     gene            complement(17730..>17997)
                     /locus_tag="VEV83_12050"
     CDS             complement(17730..>17997)
                     /locus_tag="VEV83_12050"
                     /inference="COORDINATES: protein motif:HMM:NF017932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-dependent peptidase"
                     /protein_id="HYK45897.1"
                     /translation="LLDKADGETDGIPTQLLSRQYTIPWIKYMSEEIEKIKAGNSDIN
                     IYGASSTGEFFAVAAEYFFSAPERLKNTHPELFGLMEKIFHQAR"
BASE COUNT         5155 a         3924 c         4063 g         4855 t
ORIGIN      
        1 tcagatctct tttccttcac agagcaattt ccaaatttgt acattgcagc cataacaaaa
       61 cattatgagc ataactgtgg tgggaagcat ggcttttgac gcaattgaaa ccccgttcgg
      121 aaagacggac aagatcgtcg gcggctcagc aacttatgtt gcctatgctg cgagcaactt
      181 tgtaaaaccc atccagcaaa tttcaattgt cggttacgat tttccggagg aagagctcaa
      241 tgcattgcgg gcacgcggcg tcgacacgga aggggttgtg atcgtgcccg ataagaagtc
      301 gtttttctgg agcgggcgtt atcacctcga catgaacacc cgcgacacgc ttatcacgga
      361 cctgaatgtg ctcgctgact tcgacccaaa agtgccggag cattaccagg actcagaatt
      421 tttgatgctt ggaaacctgg tgcccgcgat tcaacgtgaa gtgataaacc agttcattga
      481 caggccaaag cttatcgtga tggatacgat gaacttttgg atcgaaacgg catgggaaga
      541 tctcgaagaa gtgtttacca tggttgatgt gctcctcgtg aacgacagcg aggcgcgcga
      601 gatcagcaaa gagttttcgc ttatcaaagc agcgagaaaa atcttgagaa tgggtccgcg
      661 cttcctgatc gtaaaaaaag gtgaacatgg cgctttgctg tttcatgatg acagtgtgtt
      721 ctttgcacca gctcttccgc ttgaagacgt ttttgaccca acgggtgcag gagacacctt
      781 tgccggaggc ttcatcggcc atttagccaa gacacaagac atctcttttg agaatatgaa
      841 gactgcgatc attgtgggtt ctgcgatggc aagtttttgc gtagaaaaat ttggcgtgca
      901 gcgcctcaaa gaaataacga agcacgatat tgacgccagg ctgcaggaat ttgttcaact
      961 ggtgaatttt gatatcgcgc tggtgtaggt ggtaccgttt gaagagtgct cgcagacgag
     1021 gcggcgcgtc tgttatgtgg gccttagaaa agatctgcaa cgctaaaaaa ttgtacaacg
     1081 tgaggaaaat gctcatatac tatttcatcc tgcatgcgtt agttgcctgg agctgcaacc
     1141 tggtacagca caaagagcag gagcaacatc agcaaccaag tatccagcca gatacaacga
     1201 tcacaaaaca aacatcgttc aacaatttat ttgtcgatac caaccaggtg gtttcttttc
     1261 tatcaaatca tccggcgtat caaaaattcc agcagcagta tgctgatttt tataggcagc
     1321 ggaactacga atttgcatgg ttcgacagca gcggcatcag cgagcaggct tataatttta
     1381 tcaaccttct tggcaatgca gtaaacacat acaacgacag ttcattgtac aacaaagagc
     1441 tcgtaaacga agtagacgca ttcaaaaaag atacgaccga tacgctgata cacaagatgc
     1501 ctgatattac cgaaactgaa ctcgcactta cgggtcaatt ttttatgtat gcatcaaaag
     1561 tttacaacgg agccgatatc gacgttgagc agcttggctg gttcattcca agaaaaaaag
     1621 ttgatctcag ccttttactc gattcgctca ttgcaaataa atccggtgtg cagagtactg
     1681 aatttcccat aagcgatgag tacaaaaaac tacttgactt tctgccggtt tataacaaca
     1741 tcgcacagtc ggaaagatgg gatacgatcg ccttccccgc aaaggcttta cataaaggaa
     1801 gtaagtcgtc gataattccg gtcgttaaaa agcgtcttta tgggctgggc gacttaacgg
     1861 aacaagacag caccgctgtg ttcgacacag cgctgttgaa cgcagcaaaa aatttccagg
     1921 cgcggatggg attgaaagct gacggtgtga ttggaaaagc ttttttgaaa gaactgaatg
     1981 tttcgcccca acaacgcata caacagatct tgatcaacct ggagcggttg cggtggatgc
     2041 cgaagatgaa cgatagcgcg atgatcattg tcaacattcc cgagtataaa atgtatgtgt
     2101 atgaaggtgg ccagttgcag tttgatatgg atgtggttgt gggcgcatcg gcaacgggaa
     2161 ctgtgatctt cacaggcaat ctcaaataca ttgtgtttag tccatattgg aatgtgcccg
     2221 ccagcattct caaaaaggag atcgtacccg caatgagcag gaacccaaat tatcttgcgg
     2281 aacatcacat ggaaaaatat ggaacaggcg ccgaaggttt gccattgatc cggcaattgc
     2341 ccgggcctga taatgcactc ggaagagtga agtttttatt tcctaacaac ttcgacattt
     2401 atttccacga cacgaatgat cccggcgcat tcaattcctc caaacggaat atcagccacg
     2461 gatgtattcg actaagcgag ccaaaggaat tggccatgta cctgttaaga aatcagccgg
     2521 aatacaccga ggaacgtatt gatagtttaa tggacctcga taaagagaaa tgggtaacac
     2581 ttaaaaatac agttccggtg atgatcagtt attatactgc gtttgttgat gacagtggca
     2641 ggctcaattt ccgcaatgat atttacaaac acgattctgc aatggcagcg aagttgttcg
     2701 caagcccgct tactgataca ttggtaaatc aataagacta cattaacggt ttctgcacct
     2761 tgttttatta agccattatt tttatccttg tacttcatcc gaacaaactg tttatggaac
     2821 aacaatccct gttgacggat attgagatca gccttgtgca tgcgaccaca ggtcaacgat
     2881 tcgccaacca tcttgttgat ctcgttgttt atgacctcgt gaggcttttt ataattaacc
     2941 cgttggtcac atccggcaat gcaatcatgt attctgcatt ttccaatcca gaggcgatca
     3001 tgctcataaa tcagttgttc ttttttgttt tctacatgtc ctttatattt ctgcaggagg
     3061 caattctcaa gggcaaatcg atcggaaagt ttgttacagg cacccgggcc gtgaatatgg
     3121 acgggagttt catttcaaca aaaactgcac tactgcgcag cctcagccgc atcgtgccat
     3181 ttgaaccttt gagcgcgcta ggtagccctc cgcgtccctg gcatgaccgg tggacgaaca
     3241 cttatgtaat tgatgaaaaa aaatcagtcc tcaatcctga acagcgagta caaatttcct
     3301 gattctttga ttgaaatttt aattactgca cagccgtttc tgtgcccatc ctcccctcaa
     3361 aaatttgttg gaaaggctga tataaaaatg tatgttgcaa tcctcatctc aaaacgaaat
     3421 aagcgttcat catggtggac actgtgaaag aaaccttccg cgaaagattc gcgacggaac
     3481 ctctcatcat ccgttcgccc ggccgtgtaa atattatcgg tgaacacaca gattataatg
     3541 aagggtttgt tttgccgggc gccatcgaca agtatatcta catcgctgtt tcaacacgtg
     3601 atgacaatcg tattgagttg tatgccggcg atttccagga aacatatgca tgcacgattg
     3661 aagacgttgc gcccacgaaa caagtatggc caaattacat tttaggtatt gttgaccagt
     3721 tgaaaaaaag cggcttcgaa ttgaagggct ttaatgctgt ggttgacggt gatgttccaa
     3781 ttggcgccgg cctttcttca tcggctgcag tagaatgcgc taccgtattt gcattgaacg
     3841 aattgtttgg gttagggctt aataaaatgg aaatggtgaa gctcgctcaa agagccgagc
     3901 atgcttttgc gggcgttaaa gtgggcatca tggatatgtt cgcaagcatg tttgggaaaa
     3961 aggaccatgt aataaaactg gattgcagat cgctcgagta tgagtatgtt cccttccatc
     4021 ttgaaaaaat caaaattgta ctgctcaata cgaacgtgaa gcactctctt gcttctacgg
     4081 agtacaatac ccgccgcgaa caatgtgagc agggtgtaca ttggataagc gaacatcgtc
     4141 caggcattaa aagcctgcgc gatgttacga tcgaaatgct ggatgaattt gtacttccaa
     4201 aagaccggct catttataca aggtgcaagt atgtagttaa tgaaatagat cgtttactgc
     4261 aggcttgtca ggatctgaag cgggatgata tcaaagcgct tggaaaaaaa atgttcgaaa
     4321 cacacgacgg tttaagtaag gagtatgaag tgagttgtaa ggagcttgat tttttggttg
     4381 acaacgtgag aaacaacgat gcggttattg gagcaagaat gatgggcgga ggttttggcg
     4441 gatgcaccat caacctcgtg cgcgaagatg ccattgaagg cttgatatca gaattgaaaa
     4501 aaacttacga acgggaaatg cagctaccgc ttacggctta tatcgctgaa attgaaagcg
     4561 gaacaatttt tgctgcctga attcaatcta ttattctatt gcagaaccgt gttgttgact
     4621 acagtgccgt ctcttactgc aagattacta tagacaatat cctttcattt taagatgtac
     4681 cctaaaactt tttaaaatga aaaaaccaac acaccttcac gcgtctgcaa gtgtcgacat
     4741 tcgctttttc ttcttcgtcg tttcattaat tttattttcg gttggctgca ggaagcaaag
     4801 tctctccgat atcaatctaa gatctgcgtc agcggcgcag tctcaaatta gcggaacgcc
     4861 aaacatcata cttattcttg gcgacgatat tggttacgaa attcccacgt gtgatggcgg
     4921 acagtcttac tccacgccta atattgatca gatggcagcg aatggcacgc gtttcacgca
     4981 atgtcatgca agcccgttgt gttcgccatc acgatttatg ttgatgacgg gaaaatataa
     5041 cttcaggaac tatacggaat ggggtatcat ggacaagaac gaaagaacca tggccagttt
     5101 tctgcaagat gaggggtata aaacatttgt cggaggcaag tggcagttcg acggaggcga
     5161 tcgctcaatc catagcttgg gttttgatga ttatatcgtt tatcttcctt ttgcaaggca
     5221 agacgaggag caagatggtt cccgttacaa aaacccccac ttgtacgtaa atggagattt
     5281 tttagccgat agcttaacac tcaataaata cggagaggat attgtatgcg attctatcat
     5341 ccaatttatg gcgcataacg caagcgctgg cgagccgttt tttgtatatt atccgatgat
     5401 gctgtgccat gcgcctttct ctccaacgcc agatgattcg gagtttccgg cgtgggatcc
     5461 gagtctggga actagcgatg ctgatttttt cccttcaatg gttacttata tggataaaaa
     5521 aatcggccag gtcattcatg cagttgattc gttgggattg gcgcaaaata cgatcattct
     5581 atatatgggc gacaatggca ctcctgaaaa gatcacttct attttcgacg gctatgaaat
     5641 aatcgggcga aagggacgca caatcgaata cggaactcat gttccgttca tagcttacca
     5701 accggggttt gtgccagccg gagtgaatga tgatctgatc gattttaccg acttccttcc
     5761 taccattgct gatattgccg gggcgggaat ccctaataat ttcaaaacaa tagatggcct
     5821 tagtttttat tctcaattat tgggcggcac aggcgaatca cgcagttgga tatattgcta
     5881 ttatgcgcct caccaaaata acatcccaaa acaatgggcc caaagtttaa cctacaaata
     5941 ttacgatgat ggaagattct tcaatatcat ttccgacatc agggaacaaa atcccatacc
     6001 tgattcttcg ctaacgactg atgaaatgct tattaaacag caattgtttg aggtgatcga
     6061 cggcatgcaa aagtagcgtc atacgcatct ttttcaccgg atgctctgca tcgccggtcg
     6121 gcataatttt tttgattcgg cagcaatggc ttacaaatgt caggaagtaa tacttttgca
     6181 acgctcaggc tactttttgc agactgcctc gtatctaaaa atgcgaagca gcgatttcag
     6241 agttattaga atcataggcc ggataacgta ttactaatgg agataccgaa acgctgttct
     6301 gttcgaggga atgtaattaa tcgtaccctc tttcttgctt ttgggttgtt gctgtttttt
     6361 tcatgcaaaa agcagtttga tgctggtgat aagcagccgc ctcctccgcc ttctgataag
     6421 acgaatatca ttttgatatt ggcagacgat attggctatg aagtgccaac atgcaacggc
     6481 gggcagtctt acgaaactcc taaccttgat aagatggcaa acgaaggaat gcgttttacg
     6541 gaatgtcatt caacgcctct ttgttctcct tccaggttta tgtttttaac gggtaaatac
     6601 aatttccgta actatacggc atggggacaa atggacgttt ctcaaagaac gatcgccaat
     6661 atgttgaaga gtgccggcta tgcaacctgc gtggctggta agtggcaact ggacggaggc
     6721 gatgcttctg ttcacgcctt tggcttcgac agttattgtt tatggaatcc atatttcgcg
     6781 ggcgtaggag gttcgcgata taagaacccg catatttatg aagatggcgg ctattggtcc
     6841 gctgcaaaaa gcgagggtaa ttatggcgag gacgttttca ccaactacgt gttgaacttt
     6901 atcgaaacaa atcaaaaggc cagcaaacct ttcttcgtgt attaccccat gtgcctttct
     6961 cacgcgccgt tttcaccaac ccctgatgac gccgattacg ccgcgtggct caagggaaac
     7021 gatccaaaat attttaagtc gatgatcaaa tacatggata aaaagatcgg ccagatcgtt
     7081 gacaaggtga atgaattgaa cattgcgaac aacactgtca ttttgttcac caccgataat
     7141 ggaacacccg actcgatcgc atctgaatat gacggcgacg tgatcctcgg cggaaaatct
     7201 tctaccacag aatatggtac ccatgtgccg ttgctagcct acgcaccggg gttggtgcca
     7261 cacatggtga atgatgaatt gatcgatttc acagattttc tacccacagc tgcagacatc
     7321 gcaaaaattt ctgaaccgga tacgtatggc gtgttagatg gcacgagctt ttaccagggc
     7381 ttaaccggtc acagtgaaca tgcacgcagt tggatctttt gccacttcga tccacatccc
     7441 ggaaatgata cggtagaacg gtatgtgcaa aacaccattt acaaatatta cgaagacgac
     7501 aggttctatg atattgttgc cgatatcctt gaagagcacc cgatccccga ttcgttatta
     7561 agcgttgatg aacagaacgt gaaatcgcaa tttaaggacg tgttaggtcg aatgcataat
     7621 taaattgtag taagttcgaa gatcctttcc ctatcgcgcc ctgcttcatg aagccctgct
     7681 tcaacaacag atccatgctg cagaaattag ctgcgttgag tgattaactg gcgtgagcgt
     7741 tttcatgcct gaaaacctat atcatgagac gagttgaaaa ccgcttcaaa accacaataa
     7801 aaataacgtg ccttctactt gcttctttgc tgctgatcgt ggaggaaagc tgcagaaaag
     7861 aaggtgatga tttttcacct cttgtactcg cgccgcccgg taaacctaac atcatcgtga
     7921 tactcgctga cgattacggt tatgaagttc ctgggttcga tggcgggcag tcttatagta
     7981 caccaaatct taattcaatg gcccaacaag gagtgcggtt tacgcaatgc cacagcacgg
     8041 ccctttgttc accatcacga ttcatgttat tgacaggaaa atacaatttt cgtaattaca
     8101 gtacctgggg cgtgatggac acgtctcaaa gatcatttgc aaatatgttg cgtgatgcag
     8161 gttatgctac atgcgtcgca ggcaaatggc aattagacgg cggcgatacg ttgataaggc
     8221 atttgggttt cgacaattac attgtgtggg agatccttgg ttctgatgaa gatgtcgaaa
     8281 agggatcaag atataaagat ccactactgt acgaggatgg cgcctacctg cccgctgaca
     8341 gtgtgaaaga caagtatggt gaagatattt tcaccaacta tattctaaat tttatccagg
     8401 ccagccacga taaaaacaaa ccgtttttgg tttattatcc atgttgttta acacatagcc
     8461 cgttttgtcc aactcccgac gatgcggaat tttcaacgtg ggatccaaac aacgtgtttg
     8521 gagacacaaa attttttccg tccaatgtca gctacatgga taaaaagatc gggcagatcg
     8581 tctcaaaact tcgggacatt ggcgtcgatc gaaacacaat tattttattc accggcgaca
     8641 atggtacttc agataagatc agttccaaat tcaatggtta ctacattcag ggaggcaagg
     8701 gacatacaac agaatatgga acgcacgtgc cgttggttgt gtatgcgccg gcttttatac
     8761 ggagcggcgt gaacgacgat ttgatagatt tcacagactt tcttccaacg cttgcagacc
     8821 tcgctcacat tcaacgtccc acgacatatg gagtgctgga tggagtgagc ttctaccccg
     8881 cgatcgcaga cccctggtca tcaccgcggg attggatctt ttgtcatttt gacccgcatt
     8941 ccgaaggaaa caaccaggta attcgctacg tacaaaacaa aaattacaag tactatgaag
     9001 atggcagatt ttacgacatt gttcgagaca ttttagaaag agatccgatt ccggataggc
     9061 agttgactgc agaagaaaaa accgtaaagc aacaattcat caatgtgctc ggagagatgc
     9121 acaattgaaa aagtaattag ttcttatggg tgtttttcca tacccacgga ggaatgggag
     9181 agccggatga ccataaaccc ttcttcaatt gccttgcctt ttcggcgtat gcgctccacg
     9241 caggattcgt gtcgtacctc gtatcatgcc atgcgaatcc ctgttgcaac attcgctcat
     9301 taacgttcat cttgaacaat gtgacgatgc cgagcgtcgc accgctttca tctgttcctc
     9361 gtattgcaac ttttacggta tcgaagaaaa taagatcgcc taaatatgtt cgcgcctgct
     9421 ccgcgtaatc ttgtccgatc tcagggcaat cgacgccaaa caacgtgacc tttacttgtt
     9481 gtttgttggc ggttaataaa gtgaaagtat caccgtcagt taccgagatc actttcccgc
     9541 ttaattgcgc gattgaaaac aatggaagaa aaacggcagg cagtaatgcg aagctcaata
     9601 tatatgcaag cggcaggtgt gacgatctgt tcattcaatt aaaaacaaaa cccccgcgac
     9661 cgcaggggtt tgctcctcag actggacttg aaccagtgac cctctgatta acagtcagat
     9721 gctctaacca gctgagctac tgaggaattt ttttattcag gggcagcaaa aataaagttt
     9781 tttgccattg tgcccaaccc attttttaaa acgcggacta atacaaatat tccgttttgt
     9841 aaggatatcg ttccttgtaa agtatcctta ctttttcaag aatgcgatct cgcagtgtcg
     9901 caatattttt tctttcagtc gctgaaacaa acaccgcatt gccattcgta gcaagctccc
     9961 atcgttcctc aaggtccttt aatatttctt tcttcgcatc tacattcagc cattcatcga
    10021 aagtgcgttc ttcataaaca tccattttat taaaaatcgt tacgatcggt ttatcgaatg
    10081 cgtcgatctc ctgtaatgtt ttatttactg ttcccatttg ctgctcatac tgtggatgag
    10141 aaatatcaac aacatgcagt aatatgtctg cttctcttac ttcatcgagc gtgctcttaa
    10201 aactttcaat aaggtgatga ggcagtttgc gaataaagcc caccgtgtca ctcaataaaa
    10261 agggtgtgtt ttcaaacacc actttcctgg tagttgtatc gagtgttgca aagagtttgt
    10321 tttcagcaaa cacatcactt ttgctgagga ggttcatcag ggtactcttg ccgacattcg
    10381 tataacccac gagcgaaaca cgtatcaatt cgccccgttc ctttcgctgc gtaaatgatt
    10441 gcttgtcgat ctctttcaac cttttcttca gaagagatat cttatccctt acaatacgac
    10501 ggtcagtttc gatttcggtt tcacccggac ctctcgtgcc aatgccgccc cctaaacgct
    10561 caaggtgctt ccacatgccg cgcaaccgcg gaaggatata ttgatattgt gccagctcta
    10621 cctgcgcttt tgcgcgagcc gtctttgctc ttcgggcgaa gatgtccaat attaaatcac
    10681 tgcggtcgat cgttttcaca tcgagtactt cttcaatgtg cgtgatctgc gaaccgctca
    10741 gttcatcatc aaaaattatt acgcgcgctt cgtgattggc caggtaagcc tttatttctt
    10801 caagttttcc ttttcctatg aaactgcgac tgtctggttt tgccagtttt tgtatgaatc
    10861 gtttttggga caaggctccg gccgtttcgg cgagaaacgc aagctcatca aggttttctt
    10921 gtacctcagc ttccgtttga cctttctgca ctacgcccac gagtatcgct ttctcagcgg
    10981 aatcaacatt ttgtctccgt tcaatcaaat tgcttgtttt tgcaaaagta tgctgcggtt
    11041 aaatgaatga gaagttgggt gaggaaatta tcacaggccg ctcaatgtta agccgatcga
    11101 ccagggattg attgctggac ccgccccggt tttcaatacg ttcgtgacct ggtacgagcc
    11161 atcgacggaa atatgtccgt agccgaggcg cccggtgacc gcaagacggg ttgtattaaa
    11221 aaactttttg tcagattctt ttgcgatgta tttgtcgtca tagaccgatc tgccggtaga
    11281 gtcaaccagg ttttttccct ttgtatgtgc agacagaaga aaaccgccct tgacaccaag
    11341 cgccgcttta aagcccttgt cgggttgcac cgggttcatt acatatcgta actcgattgg
    11401 cacctcgaca aaccccgtaa ccagtttgaa tttgtcgaaa tgattggttg cggacacatt
    11461 tgtaaacggc aatgtggcgg tgttggactt caaattcaca taggtattgg aaaagaatat
    11521 attgctggtg cctattccca aaccgaaacc tacgctaaaa ctcggattcg ttttgaacgg
    11581 cttgtcgagc atcacgtatg cattgaaatg cctcgaaaag ccggacgtat taatgctgtc
    11641 cggtaaactg ggccagccat cataaccata ttggatcatg aagtgatcat tcgcccgtgt
    11701 gctcaggtca agttttgccc aatctttttt gggagtcggt tgtgttgtat ggatagtgct
    11761 gtcttgagat ttcgcgataa cggctagaat tatgaggaaa aaaagagata ttgatttttt
    11821 cattagccag ttgttatgta caaatgtttt taacgatggg cgacaaaaat aaaagaattc
    11881 aagtgacagc accggttaaa ataacgcaaa ataaaaattt aaaatattta ggcgcgctgg
    11941 taataaacga aatagtttca ggatttaatg atatatactt aatttcactg tctgcttcgg
    12001 ttccaaaact aattgcaatg aaaatcctgg tcgttgaaga tgacatcatt atgttagcat
    12061 ctatcgaaca ccaattaagg caggaaggat tcgaggtaat caccgctacc gatggacgtg
    12121 acgcaatgct cgcctttgaa aagcaaaatc ctgatcttgt tatcactgat atattgatgc
    12181 cgctaacgtc cggactcgaa tttctaaata tggtacgcac atcgggcggc aatatcccgg
    12241 taatggttct gtcggcactg gatgctgaag acaccgtgat agaagcattc aaccttggcg
    12301 ccgatgattt tctcacgaaa ccggttaaac cgggcgaact accggttcgc gtaaagcgac
    12361 ttcttaaaaa ggaaagataa tcggtgaaag aatcaagtac tcctctagct ttttttagga
    12421 atctataaag gccggatggc aggaaaattg gaagtgtcag tgttatgaga cacttattat
    12481 ttgcagcgac gttcctgctc gtgctgacct gcgattcaaa cacttctgtc agcgcagatc
    12541 tccccggttg gccaggcaac atcaaacgga tagctgaaaa tttgggtggc acatggcagt
    12601 tacaacctgt actaccttct gatacggcca ccggaaaaac acctacgatc acctttgacc
    12661 ttcaaaggca cacttttaca ggtaacactg gctgtaatga aatgaagggc agttttaaat
    12721 tgaaggccga ctcattagct ttcaccgaac agatcgtcgc aacgaaaatg atctgccagg
    12781 gatacaacga aaaagcattc ctggataacc tcttcaatac aaatcgttac caggttaaag
    12841 acggggtttt gcagttgatg tataatgaaa cgatcctctc aaagtgggtg cggcacgccg
    12901 acacaacgac tacaaagcag atatgattta agaaacttta aggtatatct gtcaaaaaag
    12961 aaataaattg caactttaac tgcggttgca tgaaattgat tagtgttgcg atggccgctt
    13021 tgagcctcct cagtgtttgt aatatttccg cgcaaaatgt gagacctcgc gcgtcagcgg
    13081 agccggggtg gatcacaaaa atccccgtcg attataaaag tacctcgctc gatgcagaag
    13141 cagaagacgg ttatatagac cttgattacg aaaaacaagt caacctcaaa gagcaatcta
    13201 tctacgtgcg tcggtctgta cgcataattt ccgaggctgg cgttcaaaat ggttcgcaga
    13261 tctccatcgg cttcgaccct tcatatgaac aattgatttt ccacaccatc cgtattttgc
    13321 gtgacggaaa ggcgatcaac aaactcgatc ttgcaagaat aaagaccatc cagcaggaga
    13381 aagacctcga taattttatc tataacggaa cgctgaacgc agttctcttc cttgacgatg
    13441 taagaaaggg cgacatcatt gaatatactt attcaacgaa aggtttcaat tcgatcttca
    13501 atggtaaata ttcagacgtt tacggaacgc agttcacgtc cccgttttat aacatttatt
    13561 ataaattggt ggttccgcag aacaggacgg tgaatattaa gaacagtaat gaaaccgcag
    13621 cccctgatgt ttcttcaacg acggccagca ctatctatga atggcgaaaa acaaatgtga
    13681 aggcaatgca cattgaggac aacattccca cgtggtacga tccatacccg gagataatgg
    13741 taagtgaata cagtacctgg aaagaagtca gcgactgggc attgtcgctt tttcccgtta
    13801 acgcgcaact gtcccccgaa cttagaagca aggtgcaaca aattcaaaaa gaaaatcaaa
    13861 cggatgaagc cagggttttg gccgtgctgc attttgtgca ggacgatatc cgttatatgg
    13921 gcattgaaat gggggcgcat tcgcataagc cttcgggccc gaataaggtt tttgcgcaac
    13981 ggttcggcga ttgcaaagag aagtcattat tgttttgtgc gatgttaagg ccgatgggca
    14041 tagaagcggc gcccgtgttg attaactcag attataaaaa aacacttttc acgtggttgc
    14101 cttgttcaac agattttgat cattgtaccg tacgggtaaa actcaacgaa aaattttact
    14161 ggtttgatcc tacgatctct taccagcgcg gtaacattga taatgtttca tatcccgatt
    14221 atcagtgcgg acttgtaata acagacacca ccaccgcgct cactgccatt ccgcggcata
    14281 caaccggcag cgagatgata aaagagatct ttacaattcc ggatatgtcc ggcaccgtga
    14341 agctggaggt aataacgacg catacgggcg actacgcaga cattgcaagg agtgatttca
    14401 agaacaacag cctgtacgaa atgcaacagt cataccagga cttttacctg tcttatttcg
    14461 atgacgcgaa atcagacagc ctgcgttatg aagacaatga aaaaacgggc gtttttatca
    14521 caaaggaatt ttacacgatc aaaaatttct ggaaagataa gaacggttcg aaaacagttt
    14581 cgttcacgcc cttcgtgatt gaaagtgttt tggaagttcc gaaagaccgc caacgcacaa
    14641 tgcctttttc tatcggctac ccggcaaatt atcatgaaga aatggtgatc aatcttccca
    14701 gcgaatggaa agtaaaaaag acatcttcaa attttacgtg tcccggtttt gaatttgaca
    14761 agcgggcatc atttgccaac aggcaggtaa cgctcaatta tgattatcgt agcctgaagg
    14821 attatatcga tccgtcagag gccgacgatt acctgagcaa tattgaaaaa gcaagacgcc
    14881 agcttgatta tggtttaagc ttcgatgatg ccagcggtga gcctgtggat aaaagaaatg
    14941 caaaacgaat aggcattgca gcactcatca tatcttttgt aattgctggc gttgtatggt
    15001 ggacgcaaaa acagccctca gcataacctc ttttcacgcc tttattttca ctctacctgg
    15061 cgcgatacgg cacaatactt gggtaatcat ttttaatttt taactcctaa aaatgctaaa
    15121 ctatgaaacg agtactcgta tggtgttgcg tcaccgtttg cctggcaacg gtcagtattt
    15181 tcggccgtaa ttcaagtcaa caaactgctc ctcttatctc aaacgtcgtc agcgatactg
    15241 taccgcatgc gcaggatacg atgaacaaga cctatagcaa caagagttac agaaaagaca
    15301 gcggctacaa taacaagtac aattcaaacc gcaacatgaa tgttgatacg gggagcagta
    15361 accggaataa tatgaacaac ccgccaaccc gggattcgtt atctaacaag cctccgcagc
    15421 aataattaat ttttgatttt tgctacattc cgagatcgta attagtagcc gccacatcgg
    15481 cggcttcttt ttaactgtac ccgcagcgtc ccgatcttgc tggcaatttt tttgatgttt
    15541 atatgtaaac actaacatca tgaacacaag taacattagt aaccggaatc aatatgtcct
    15601 gataacaggg gccaccagcg ggtttgggta tgagttcgcg aaatgttttg cgaaggatgg
    15661 ctacaatctc attcttgtcg caagaaacga gacacgtctc caacaaataa ctgatgaatt
    15721 gaagcaacag tacgatgtgg aagtaacgcc cctgcaaaaa gatctcttcg agagaaacgc
    15781 tgcggcggag atatatgcga agacaaaaga gatgggaata aacgttaaca ttctcgtgaa
    15841 cgatgcgggc cagggcgagt ggggtaggtt catcgacacc gacatcgaac gtcaactcga
    15901 cattgttcag ctaaacgttg ctgcactcgt tgagcttaca tattattttt tgaaagacat
    15961 ggttgcccgt gatgagggta agataatgca gctcggctca gaagtgagca aagcgcccac
    16021 gcctttaatg gctgtgtacg ccgcaaccaa ggcgtttgtc ttgtcattca gtgaggcgtt
    16081 gataaacgaa ttaaaagata ccggcgtgag cgtaactgtt ctaatgccgg gagcaagtga
    16141 caccgatttc tttcataagg caggcgccga aaaaacggtt gtctacaggg aagaaggatt
    16201 atcaacaccg gaagatgttg tactggatgg atatgaggct ttgatgaaag gcgaaagcag
    16261 gatcatttcg ggcagcaaag caaaaatgca cgtaatgatg agcaatatga tgccagacag
    16321 cgcaactgcc ggcaacatgc gtggcaagat ggaagaaagc gataagaatc cgcaggaagg
    16381 ccgcaagcaa tctggccacc aggcgtcacg aattgaaagg gaaaacataa atgaacaaac
    16441 aaaaaaaagt tcgggcgact acgaaaaaac tgagaacgga aaagaaagta tcgctgctaa
    16501 aaatgattct ccaagatcac tctaaaaaac aaatcctatg caggcgcaaa attttgaatt
    16561 acttgttgat ggcgtccctt acatgataaa agcgacgcca tacgatttca atggacaact
    16621 tcgattcacg gtcagctata acgggagtga agattatatt ttcacaaggg acgcagaagc
    16681 ggggcagctt actgccattg gtaccgaggc actggatatc cctgataatc tcgaacaggc
    16741 catatcggaa aaattaagtt caataacaga atgattcaac cgaggccctt ttgaatcacg
    16801 gtcccgcgcg ttatgccggg acctttttat tttaacaaac gaagcgggca accatttcag
    16861 aggcgcaaca gtttatttat gaaaaatgat tatgaggtta agaagcgcta tcaatcctgc
    16921 tcgtgtgtta atcgcagttt ttcttattgc tggtgtcgtc tatgcgtgca ataaaagcac
    16981 cggttatgga agcggtaata atggcggcag taccggcaac aatatttcca tcaagaattt
    17041 tgctttttcg gtcagtactt taacggtgaa tagcggcact gtcgttaagt ggacgaataa
    17101 tgatgcaacg gcgcataccg ttaccgcgga tgacggcagt ttcaacagcg gcgaacttgc
    17161 atcggggcaa tcttacacgc atacatttga cttgactggc acgtatgcat accattgcac
    17221 ataccatcct gtgatgaccg catcagttgt ggtgaaatag caaagcagtt ttgtgggcat
    17281 ttgtttttgc catgccggct gacaaatttc ttattgcagc cggctttttt tgcgaaggtt
    17341 tgcgctttcg cggtaaggtg caataggtgt cgtgaatttg cattctgttt tctggcatct
    17401 ttacttgctc ctcaaatgct gttgcaaaaa atttcgacgg catgtccgaa tacatcaatg
    17461 ataaaaatac aatcacattg atcgggcatc tcatttatga gcggggaaga gaacgtaagt
    17521 gtagacatag ttagcgatcg cacaagcagg ttcccggctt cgcgggaata acgtgccaga
    17581 ggttttcaga attttacctc ttttcaaggc aggcacaaaa ccaattagtt cgacttgata
    17641 cccacgttta cacgccggcc gactcagagg atggcgctcc aaaaaacaac aacgtcaaat
    17701 cgtgaatcca aaaatcggac atcgtaaatc tacctcgcct ggtgaaatat cttttccatc
    17761 aaaccaaata gctcgggatg cgtgttcttt aatcgctccg gtgctgaaaa aaaatattct
    17821 gctgccacag caaaaaattc accggtacta gatgcaccat aaatattaat gtctgagttg
    17881 ccggctttta ttttttcgat ctcttcactc atgtatttta tccacgggat cgtatactgc
    17941 ctgctgagta attgcgttgg tatgccatct gtttcgccat cggctttatc aagcaag
//
LOCUS       DASQJI010000423         7290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_356040,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000423 DASQJI010000000
VERSION     DASQJI010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7290
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356040"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VEV83_12055"
     CDS             complement(<1..467)
                     /locus_tag="VEV83_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45898.1"
                     /translation="MRKILAVLCCLPSTLFAQENISDSSAHNWAFSASAYYYFIPDDN
                     TGNIIGYADHHSLHLEARYNYEDAKTISAFAGWRFETGNDFQFAATPMLGFAIGNTNA
                     FIPALELEASYKLFDFYSESEYLLDFESKENNFAYTWSELAINPTDYLRVGIVA"
     gene            complement(470..1195)
                     /locus_tag="VEV83_12060"
     CDS             complement(470..1195)
                     /locus_tag="VEV83_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HYK45899.1"
                     /translation="MPDTDTYNSAWGDTAALAAHEPHVLEPKTSKRLLSPIDRMSEIL
                     FGLIMALAFTCTISVATADKGEVREMLIGAIGCNLAWGLVDAIMFLLSVLAERGRGKI
                     ILNFVRKTKDTQKAGQFIAEALPPIVSSALDAENVESIRKALLKLPQSSLRVRLTLTD
                     LKMALGIFLLVFASTFPVALPFTFVKDVDQALRISNAVAIALMFICGWILAKYSGYNK
                     WFMGVGMILLGVVLVGLTIVLGG"
     gene            complement(1304..1897)
                     /locus_tag="VEV83_12065"
     CDS             complement(1304..1897)
                     /locus_tag="VEV83_12065"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HYK45900.1"
                     /translation="MAGRTSERAEALMRRLNLTYDHLLAIRFAINVAIATTIVWYVLT
                     TFTKSSPIWAIASMVAASDPQPVEAGRMFKARLINVIVGCVVGLAFLLFGAAKQWMLP
                     IALAVTVLISSFIIRVKTMWRQAPITAAIVIAAALMTDSAESGMQRGLEKIVQVIFGC
                     IVGLIVSWLMSHLWLVKQPPAEKTAAKLQQETSDVSD"
     gene            complement(1900..2883)
                     /locus_tag="VEV83_12070"
     CDS             complement(1900..2883)
                     /locus_tag="VEV83_12070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45901.1"
                     /translation="MSEVKTEIPVAPKKENGVHVKAQGAPTIWAGKVPYIKQGTYSDG
                     LPYNELNYLAFKLILKPNRFTSRQSLLDLVKVMKKPLAENGVEFRTDGFLDTPVRIRE
                     VLFVDTPDFRLYNNGFILRRRIIYDQGFPAGEPEIVFKFRHPDLQKCAETDVRPVIQG
                     DYRVKFKCQALPLKDKLGGVRMLYSHNVQFPRSSVKENDVFSFDTISKIFPVLAPLNT
                     GQGERIRLVNDAIVEEVLQDIGVLDLGDGIKAEVNMGIWRTRGEHRPLIGELAYQIKF
                     KDRKELKLQAMEKAERYFLALQYAAKDWISLNATKTGVVYRFLGNPPKSHE"
     gene            3213..4226
                     /locus_tag="VEV83_12075"
     CDS             3213..4226
                     /locus_tag="VEV83_12075"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HYK45902.1"
                     /translation="MKSALRNIFILLLIAATLAVIYWLVISYYDEKNRTDDAQVDGNI
                     VPVLARTDGFVDTIFADDDQYIDAGKILVQLDTTDLHLQLQQALTALAVSRTNVTRSQ
                     VGIHVAELDHKIAAQNIEAQKVSLTTSQSNYERNKVLQEKGVVSRQIYEMTEESYKKN
                     GIALEQAYDRQTQSAAKLEDARQQLDLANQNIAAQLNQIAIIRKSIEYATIKAPVSGF
                     VSKRKIQYGQMVRTGTQLFSIVQSNDLWVTANFKETQVSAFPVGKRVKIIADAYPDDV
                     FYGTVESVGNATGSKFALLPPDNATGNYVKVTQRIPVRIRFEDSARAHKLLRPGFSLV
                     VSQ"
     gene            4393..5979
                     /locus_tag="VEV83_12080"
     CDS             4393..5979
                     /locus_tag="VEV83_12080"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45903.1"
                     /translation="MNVVTNKFWVRFFFFAALLAGSFNFLGQSLSFSYVQGYFGVTAK
                     DANWLLRGFQAGTIITSIAGLVFIKWLGNRTLFIGSVVFFLLASFFSFRSQQFNVLLV
                     SRIAAGIANGFMIAVSMQIYLSTYQGKAKVIGSLNTVAANIGGICLGMVSNSLFTEDY
                     GWQFNYLLSVPVLIMLLAFSFRFVPATQRNQEIEEDWLSLIPFSILIVSLFFLVMFRE
                     QYEGISNIKILISALLALLSAVMLLIRGLVHKKPLFDTRLLQYPSFVVAIIISFLTGA
                     AFVFNVAILARLLGGILQMPMKDVFHFLNFLFLVLFAVLIVTFILIVKKVNAYWLMIA
                     GLLAIAYTAFSLSRLNSEFSLDNIIVPSLIGITGAGIVATAVIIIAIKTVPQHEMSKV
                     ANFRSVAFTLGIALTATDLGRLLNFETVRNFNLMIGYTDPGNPLFQERLNMLQSLYKS
                     NGLDDNQAYDAAINGITGIAKLQSFFLSMSEILFIGCIISLALAFVLFMLWVIRNYQM
                     IFNFIIFKKPVHENLQTGNS"
     gene            5951..>7290
                     /locus_tag="VEV83_12085"
     CDS             5951..>7290
                     /locus_tag="VEV83_12085"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK45904.1"
                     /translation="MKICKPGIVSLLFFCLLLCAAHAVAQKDFTVTDCVDYAFVHNPL
                     LNATAKDTSVAAISTQRVTGLYLPRVNFLSAFQYYIASRKLIVEGGSLFAPPDLPDGK
                     ARALNTGFNHNWYPTFNVNQLIFDPSYRNNYNIALQNQALQSQQLVSFKIDIITGIFK
                     AFNTCKLLEIQEHFLEQNVTRIDTLAGLTRTKFEKGAGTKIEVNRVEVTANRMKSELE
                     NVRSSYNEALLALQFQMNYLEPDSMILSSDLTVAQIVGHADSLLLQLSRSNPSARIES
                     QLLQTQIALADESIKLEQSRAKPVLGADASLGFTPAADQITKMFQGERWKPYSYIGLN
                     LGIPIFNGLDVKRGVEQRKLQASQSRNYLDQFTIQFETERSTTYVEIQNAMERFRYAD
                     ANLQLANNNIDLLHEAFVNGVADNQDLILGENDLYDNQARYFNELLNLMLNEVEG"
BASE COUNT         2004 a         1630 c         1639 g         2017 t
ORIGIN      
        1 gctacaatac ccacgcgcaa atagtctgtg gggtttattg ccaattcaga ccacgtataa
       61 gcaaaattgt tttccttact ttcaaaatca agaaggtatt cgctttcaga ataaaaatcg
      121 aagagcttgt aagaggcttc caattcgagt gcgggtataa aagcatttgt gttgccaatt
      181 gcgaacccaa gcatgggcgt tgcagcgaat tgaaaatcgt tgccggtctc gaagcgccat
      241 ccggcaaacg ccgatatggt cttagcatct tcgtaattgt acctggcttc aagatgcagc
      301 gaatgatgat ccgcatagcc gatgatgttt cctgtgttat catcgggaat gaaatagtag
      361 tacgcagacg ccgagaacgc ccaattgtgc gctgaagaat cgcttatatt ttcctgggca
      421 aacaacgtgg aaggtaaaca acagagaaca gcaagtattt tgcgcatgat caacctccca
      481 aaactatggt tagcccaacg agtacaactc cgagtaagat catgcccact cccataaacc
      541 atttgttata gccgctgtat tttgcaagga tccatccgca aataaacata agggcaatgg
      601 caaccgcgtt cgaaatgcgt aatgcctgat ccacatcttt gacgaatgta aatggtaagg
      661 caacaggaaa agtggaagca aaaaccagca ggaaaatgcc taatgccatt ttcaggtctg
      721 tgagggtgag gcgaacacgt aacgatgatt gaggaagttt cagcaaagcc ttacgaatag
      781 attccacgtt ttctgcgtca agtgctgacg aaacgatcgg aggtaatgcc tcagcaataa
      841 attgtcccgc cttttgcgtg tctttcgttt tgcgcacaaa attcaatatg atcttcccgc
      901 ggcctctttc cgcgagcaca gataacagga acatgatcgc gtccaccagg ccccatgcga
      961 ggttgcagcc aatggcgccg atcaacatct ctcttacttc gcctttgtct gcggttgcaa
     1021 cactgatggt gcatgtgaaa gcaagtgcca tgattaatcc aaacagaatt tcagacattc
     1081 ggtcgatcgg gcttaataac cgttttgatg ttttcggttc gagcacgtgt ggctcatgcg
     1141 ctgcgagagc ggctgtatca ccccacgccg aattgtatgt atcagtgtca ggcataattt
     1201 ggagaaaatt taatttgcaa aagcaagttc attagcgtgc tccgaaaaaa gctaaaagct
     1261 ttcagcaaac atcgacgggc gttgaaatgg tcctgtactt acatcagtcc gatacatcag
     1321 atgtttcctg ttgcagttta gccgcagttt tttcagcagg cggttgtttg acaagccaca
     1381 ggtgcgacat cagccagctc acgataagtc caacgataca accgaagatc acctgtacta
     1441 ttttctcaag gccgcgctgc atgccgcttt ccgcagaatc tgtcatcaac gctgcggcga
     1501 tcacaattgc cgcagtgata ggcgcctggc gccacatcgt tttaacgcga atgatgaacg
     1561 aagaaataag tacggtaact gcgagtgcta tcggcaacat ccattgcttt gcggcgccaa
     1621 aaaggagaaa cgcaagtcct actacgcatc cgacgattac gttgataagg cgcgccttga
     1681 acatccgccc cgcctcaacg ggctgtggat ctgaagccgc gaccattgac gcgatcgccc
     1741 agataggact gcttttggta aatgtggtaa gaacgtacca aacaatggtg gttgcaattg
     1801 caacattaat cgcaaaacgg atagccagta aatgatcgta cgtaaggtta agccgcctca
     1861 tgagcgcttc ggccctttct gatgtcctgc ccgccataat cattcatggc ttttcggagg
     1921 gtttccaaga aacctgtata caacacctgt tttcgttgca tttaaagaga tccaatcttt
     1981 tgccgcatat tgaagagcga ggaaataacg ttccgctttt tccatcgcct gcagttttaa
     2041 ttctttgcgg tctttaaact tgatctggta agcaagttcg ccaataagcg gcctgtgttc
     2101 gccacgggtg cgccaaatac ccatattcac ttctgccttt atgccgtcac caagatcgag
     2161 aacaccaatg tcctgcagca cttcctcaac aattgcatca ttcaccagcc tgatcctttc
     2221 accctgccct gtattcaatg gtgcaagcac gggaaaaatt ttcgaaatgg tatcgaaaga
     2281 aaaaacatca ttctctttca cgctggatct tgggaattgc acgttatgcg aatacaacat
     2341 gcgtactcca ccaagcttat ctttaagagg caatgcctgg catttgaact ttactctata
     2401 gtcgccctgt attacagggc gaacatccgt ttcagcgcac ttttgcagat cgggatgccg
     2461 gaatttgaag acgatctcag gctctcccgc agggaaaccc tggtcgtaaa tgattcgccg
     2521 gcgtaaaatg aatccattgt tgtaaagccg gaagtcaggt gtatccacga agagcacttc
     2581 acgaatgcgg accggtgtgt caagaaaacc atcggttctg aactcaacac cgttttcggc
     2641 aagaggcttc ttcatcactt ttaccaggtc aagaagactt tggcgcgacg taaaacgatt
     2701 cggttttaat attagtttga atgcgagata atttagttca ttgtaaggta aaccgtctga
     2761 gtaggtgccc tgtttgatat aaggcacctt tcctgcccat atagttggtg caccctgtgc
     2821 tttaacatga acgccgtttt ctttcttcgg cgcaaccgga atttctgttt ttacttctga
     2881 catatgcata tgttttaggt cgctgataca attagttttt tggtcatcat taaaccgagg
     2941 ttacaaatta cggtattttt taagctgtcg gctgattttc cacatgtttt tgttgtattt
     3001 tctgtggcca ctttgtttaa cggttaaaca aggccgcttt tagaaaacgg attcagctaa
     3061 ttttgaaaga agacattgtc gccgaagagc aaaagaaatg ttgacgaaca ttgcttattg
     3121 gtggaagctt agcggtcaat tagcaaacaa taaatagtgt caaccaaaat tgtccaaagg
     3181 ctgcaacgaa gtagatcaaa ctgcctgata aaatgaaatc cgctcttcgc aatattttta
     3241 ttttgttgtt gatcgcagca acgctcgcag ttatttattg gcttgtcatc agttactacg
     3301 acgagaagaa tcgcactgat gacgcgcagg tagatggaaa tattgtgcct gtactggcgc
     3361 gaaccgacgg tttcgtggat acaatatttg cagacgatga ccagtatatc gatgcaggga
     3421 agatcctggt ccagcttgac accaccgacc tccacctcca gttgcaacag gcgttgaccg
     3481 ctcttgcagt ttcacgaaca aacgttacac gttctcaagt cggaattcat gtggccgaat
     3541 tagatcataa gatcgcggcg caaaatatag aagcccaaaa agtttcactt acaacatccc
     3601 agagcaatta cgaacgcaat aaagttttac aggagaaagg tgtcgtgtcc cgccagatct
     3661 atgagatgac tgaggagagc tacaagaaaa acgggatcgc attagagcag gcctatgacc
     3721 gccaaacgca gtccgccgca aagcttgaag acgcaaggca acaactcgat cttgctaacc
     3781 agaatattgc tgcacagcta aaccaaattg ccattatccg aaaaagtatt gaatatgcaa
     3841 ccataaaggc gcctgtgagt ggctttgtgt ctaaacgaaa gatacagtat ggacagatgg
     3901 ttcgaacagg cacacagttg ttttcaatcg ttcagtcgaa tgacctgtgg gtaaccgcca
     3961 attttaaaga aacacaggtg tcagcattcc cggttggtaa acgtgttaag ataatcgctg
     4021 atgcgtatcc ggacgatgtt ttttatggga cagttgaatc ggtgggaaat gcaacggggt
     4081 caaagtttgc gttattgcca cccgacaatg ccactggcaa ctatgtaaaa gtaactcagc
     4141 gtatacctgt caggataaga tttgaagatt ctgcccgagc acacaaattg ctgagaccgg
     4201 gctttagttt ggttgtttcg caataatgaa ggaatatatt tcgtgagatg tcagatgtgg
     4261 aggtgaaagg acggacacct gcttcaaatc gaaagaggcg ccaggagata aactcaaagt
     4321 tttcaagcct cacgtctaac gttcaccctt cgtcagtttt cacttttggc gtttcacaaa
     4381 ttaccatcgg tgatgaatgt agtaacaaat aaattttggg ttcgattttt tttctttgcg
     4441 gcattgcttg caggcagttt taattttctc ggtcaaagtc tttcattcag ttatgtgcag
     4501 ggatattttg gcgtcaccgc taaggatgcg aattggttgt tgcgcgggtt ccaggcagga
     4561 acgatcatta catccattgc cgggttagtt tttataaaat ggctcggcaa caggactttg
     4621 tttatcggat ccgttgtatt ttttcttctt gcgagttttt tttcatttag atcacaacaa
     4681 ttcaacgtgt tgcttgtatc gcggattgct gcagggatcg cgaacggatt catgatagca
     4741 gtctccatgc aaatttatct ttccacttac cagggaaagg ccaaagtgat tggctccctg
     4801 aacacagtgg cggccaatat tggcggtata tgtttgggga tggtcagcaa tagtttgttc
     4861 accgaagact atggctggca gttcaattat cttttgagcg tgccggtatt gatcatgctg
     4921 cttgcgttct cgtttcgttt cgtacctgcc acacaaagaa accaggagat tgaagaagac
     4981 tggctgagtt tgattccctt ctccattctg atcgtctctt tgttttttct tgtgatgttc
     5041 agagaacaat acgaggggat cagtaacatc aaaatactga tctctgcgtt gcttgcatta
     5101 ctgtcagcag taatgttact tatcagggga ctcgtccata aaaaaccatt gtttgatacg
     5161 aggttgctcc aatatccttc attcgtggtc gccataatta tttcctttct caccggtgca
     5221 gcatttgttt ttaatgttgc catactcgcg aggttacttg gcggcattct gcaaatgcca
     5281 atgaaagatg tttttcactt tttgaacttt cttttcctgg tacttttcgc agtgcttatt
     5341 gtgacattca ttttgatcgt aaagaaagtg aatgcttatt ggttaatgat cgcaggcctg
     5401 ctcgcgatcg cttatacggc tttcagcttg tcgaggttga attctgagtt tagcctcgat
     5461 aacataatcg ttccctcatt gattggaata acgggtgccg gcatcgtggc aactgcggtt
     5521 atcattatcg ccatcaaaac cgtaccgcaa catgaaatga gtaaagttgc caatttcaga
     5581 agcgtcgctt tcaccttggg tattgctctc acagctactg atcttggcag gttgctaaat
     5641 ttcgaaactg ttcgaaactt taacctcatg atcggctata ctgaccctgg caatccgctg
     5701 ttccaggaac gattgaatat gctgcaatca ttgtacaaaa gcaatggcct tgatgacaac
     5761 caggcttatg atgctgctat caacggcatt accggcatcg cgaaattgca atcctttttt
     5821 ttgagcatga gtgaaatatt gttcattggc tgcataataa gcctcgcgct tgcatttgta
     5881 ctttttatgt tatgggtgat acgcaactat caaatgatct tcaatttcat catttttaaa
     5941 aaaccggtac atgaaaattt gcaaaccggg aatagttagt ctattgtttt tctgcctgct
     6001 tttgtgtgct gcacacgcgg ttgcccaaaa ggattttacc gtgaccgact gcgtcgatta
     6061 tgcgttcgtg cataatcccc tgttgaatgc aactgcgaaa gatacttccg ttgctgcgat
     6121 cagcacacaa agggtgacag gattatacct tccacgggtt aattttttgt ccgcattcca
     6181 gtattatatc gcttcgcgta aattaattgt ggaaggtggt tccttattcg cgccgcctga
     6241 tttacccgat gggaaagcgc gtgccttaaa cacaggcttc aaccataact ggtatcctac
     6301 attcaatgtc aaccaactta tttttgatcc atcttaccgc aacaattaca atattgcgct
     6361 tcaaaaccag gcactccaat cacagcaact ggtaagtttt aagatcgata tcattaccgg
     6421 catattcaaa gctttcaaca cgtgtaagct gctcgagatc caggagcatt tccttgaaca
     6481 aaacgttacg agaattgata cccttgccgg actcacgcgc actaaatttg aaaaaggcgc
     6541 aggcaccaag atcgaagtga accgtgttga agttacagcc aaccgcatga aaagcgaact
     6601 cgaaaatgtg cgaagcagtt ataatgaagc gctcctcgca ttgcaatttc aaatgaacta
     6661 cctggagccg gatagcatga tcctatcaag tgatcttacg gtggcgcaga tcgttggtca
     6721 tgcagattcg ttgttgctgc aattaagccg gagtaatcca tcggcccgta ttgagagcca
     6781 gttgttgcaa acgcaaattg cactggccga tgaatcaata aaattggagc aatcaagagc
     6841 aaaacccgtt ttaggtgcag acgcatcgct tggatttacg ccggctgcag atcaaataac
     6901 aaaaatgttc cagggcgaaa gatggaagcc gtactcgtat atcggtttga acctcggcat
     6961 tccgatcttc aacgggctcg atgtaaaacg tggtgttgaa caacgaaaat tacaagcatc
     7021 gcaatcgcgc aattacctcg atcaattcac catccagttt gagactgaaa gatcgaccac
     7081 gtatgttgaa atacagaatg cgatggaaag attccggtac gccgatgcca acctgcaact
     7141 ggcgaataac aatattgact tgttgcatga agctttcgta aatggagttg ccgacaacca
     7201 ggacctgata ctcggcgaaa atgatctgta tgataaccag gccaggtact tcaacgaatt
     7261 gctgaacctg atgttaaacg aagtggaggg
//
LOCUS       DASQJI010000424         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2813043,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000424 DASQJI010000000
VERSION     DASQJI010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2813043"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VEV83_12090"
     CDS             <1..539
                     /locus_tag="VEV83_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45905.1"
                     /translation="SKTSTGKKEPTDINALCDEYLRLSYHGMRARDKSFNATLQTGFD
                     ETLGKINIVPQDIGRVLLNLFNNAFYAVSERRKAEGVGYKPVVSVTTKLSSPSPSERG
                     RGEVEIRVRDNGSGIPESVVAKIFQPFFTTKPTGQGTGLGLSLSYDIIKAHGGEIKVE
                     TNEDERCEFVIHLPITPI"
     gene            591..>1512
                     /locus_tag="VEV83_12095"
     CDS             591..>1512
                     /locus_tag="VEV83_12095"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HYK45906.1"
                     /translation="MKILSAQQIHDWDAYTIANEPIASIDLMERAAQTCTDHILQQEL
                     FTRPFKIFCGKGNNGGDGLAIARQLLKQGASVKVYIIEFGAVGTEDFQTNLQRLHDLT
                     VNIFFIQSQEFFPVIEDNDVVIDALYGSGLNRPLKDLSAELVDHINRSEALVISIDVP
                     SGMFIDKSSPGNAVIKADVTLTFQCLKMCFLLAENEAYTGNVHVLDIGLLPEFPETVS
                     SCFQLVGSSFIKKIYRPRNAFAHKGKFGHALIIAGNKGKMGAALMATHACLRTGAGLT
                     TLNVPEEFLHVVHTSLPEAMCDIREEGLNFE"
BASE COUNT          438 a          332 c          356 g          386 t
ORIGIN      
        1 attcaaagac aagcacagga aaaaaagaac caaccgatat caatgcgtta tgcgatgaat
       61 acttacgatt gagctatcat ggcatgcgcg caagggataa atctttcaat gcaacgctcc
      121 aaacaggttt cgacgaaact ctgggaaaaa taaatatcgt tccacaggat atcggaaggg
      181 ttttattaaa cttattcaat aacgcttttt acgcggttag tgaaaggcgt aaggcagaag
      241 gcgtaggata taagccagtc gtttcggtta ctacgaagct ttcttctccc tctccctcgg
      301 agaggggcag gggtgaggtc gagatacgag ttcgcgacaa cggctccggc atcccagaaa
      361 gcgttgttgc caaaatcttt cagccattct ttacgaccaa accaacagga cagggaaccg
      421 gattaggctt gagtttgagt tatgatatca tcaaagcaca tggcggagag ataaaagtag
      481 agacaaacga agatgagaga tgtgagttcg tcattcacct gccgataact cccatttagg
      541 ggatcggggg catcattcgg ttgccacaac attcttaatt ttacgccgct atgaaaatcc
      601 tttccgctca gcaaatccac gactgggatg catacacaat agcgaatgag ccaatcgctt
      661 caatcgactt aatggaacgt gctgcgcaga cctgtaccga tcacatcctc cagcaggaac
      721 tctttaccag gcctttcaaa attttttgtg ggaaagggaa caacggcgga gacggattgg
      781 ccattgcgcg ccaactctta aagcagggcg cgagtgtaaa agtatatatc atcgaattcg
      841 gcgcggtcgg cacagaagat tttcaaacca acctccaacg tttgcatgat cttactgtga
      901 atattttttt catccagtca caggaatttt tcccggtgat cgaagacaac gacgtagtga
      961 ttgatgcgtt atacggttcg ggcctcaaca ggccgttaaa agacctcagc gcagaactgg
     1021 ttgatcatat caaccggtca gaagcgttag tcatatccat cgatgttcca agtggtatgt
     1081 tcattgataa aagctcgcct ggaaatgcgg tgataaaagc agacgtgaca ctcacatttc
     1141 agtgtttgaa aatgtgtttt ctccttgccg aaaatgaagc ttataccggc aatgtgcatg
     1201 tacttgatat cgggctcctg cctgaatttc ctgaaactgt ttcctcgtgt tttcaactgg
     1261 tgggttcatc ctttataaaa aaaatatatc ggccacgaaa tgcttttgct cataaaggaa
     1321 aattcggtca tgctcttatc atcgccggca ataaagggaa aatgggcgct gcactcatgg
     1381 ctacccatgc gtgccttaga accggcgcag gcctcacgac acttaatgtg ccggaagagt
     1441 ttttacatgt tgtgcatacg tctttgccgg aagcaatgtg cgatatcagg gaagaaggat
     1501 tgaattttga aa
//
LOCUS       DASQJI010000425         8657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_817377,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000425 DASQJI010000000
VERSION     DASQJI010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8657
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817377"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VEV83_12100"
     CDS             complement(<1..183)
                     /locus_tag="VEV83_12100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HYK45907.1"
                     /translation="MISDELQNKKTKLAVIGLGYVGLPVALYFSKKISVIGFDINERR
                     IRSLRDKIDPNKEIDPA"
     gene            complement(180..1160)
                     /locus_tag="VEV83_12105"
     CDS             complement(180..1160)
                     /locus_tag="VEV83_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HYK45908.1"
                     /translation="MIKKRVLITGAAGFLGSHLCDRFIQEGYHVIAMDNLITGDLRNI
                     EHLFPLPQFEYYYHDVSKFIHIPGKLDYILHFASPASPIDYLKIPIQTLKVGSLGTHN
                     CLGLAKDKNARILVASTSEVYGDPLVHPQPEEYWGNVNPVGPRGVYDEAKRFQEAITM
                     AYHTYHQVETRIVRIFNTYGPRMRLNDGRALPAFIGQALRGEDLTVFGDGSQTRSFCY
                     VDDQIDGIYRLLLSDYALPVNIGNPNEISLKDFAEEVLRVTGAAANIIYKPLPLDDPK
                     QRQPDITKAKQLLGWQPKVERAEGLRNTYDYFKALPSEEWHRQPKEFSKK"
     gene            1314..2645
                     /locus_tag="VEV83_12110"
     CDS             1314..2645
                     /locus_tag="VEV83_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HYK45909.1"
                     /translation="MYAIVDIETTGSHPEENGITEIAIILHNGTEVEGRYETLINPGR
                     RIPSYITYLTGITNDAVLVAPNFSDVALHIFNLLSNRVFIAHNVNFDYTFIRHHLMEN
                     GFHWLPKKLCTLKLARKAFPGLHKYGLGHLCKTFDIPILHRHRAGSDADATAVLFQKI
                     LEEGGEKLIKDFLKRDNHEQILPPNLPRDYINKLPYVPGVYYFHDAKGKIIYVGKAKC
                     LKKRVLSHFTGLNTGRKRQEFLRNIYSISFTECPTEFTAFILESIEIKKYWPEYNFSQ
                     KRADQFYGIYLFEDSIGFKRLAIDKKRKHIEPVANFTLLADAHRTLWKLVKQFQLHPA
                     LCFLEKQSQLTPYLDRHDYNERVITAVTFLQKNLGTFAIVEPPVIGNQKSCVLVENGK
                     FYGMGMLPHDNENFDPIHLKNFLTIYPENEMIRTLVKSYFQRNAANIMHLS"
     gene            complement(2710..3714)
                     /locus_tag="VEV83_12115"
     CDS             complement(2710..3714)
                     /locus_tag="VEV83_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PorP/SprF family type IX secretion system
                     membrane protein"
                     /protein_id="HYK45910.1"
                     /translation="MKVRLLVVCCLLMGELQAQDPHFSQFFSSPMTLNPAFTGKFDGV
                     LRAAGNYRNQWPTINRAYVTATASVDFPLLAGHIPFTDTWGVGLMGYTDKSADAAVSF
                     SYFSFSTAYHKGLDEDGFHQLGAGFQVTYSNMLINTTKLKFEDQLTPFGFTGTTSEIF
                     NNTTLKSNYVDVNAGILYTASTTDKNNMYAGVSLYHINRPKQEFTGVNYDLYPRATLH
                     AGGYFPVGQVTTLHLSGLFSTQAGAHETLLGGAMQFVAGNPDADKPTSFYGGAWMRFG
                     DALIPYVGLEYSDVRIGVSYDINVSDLKTASQSRGGIEISLIYITRAAEGKGVPCPKF
                     "
     gene            complement(3792..4445)
                     /gene="upp"
                     /locus_tag="VEV83_12120"
     CDS             complement(3792..4445)
                     /gene="upp"
                     /locus_tag="VEV83_12120"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HYK45911.1"
                     /translation="MVTNLSEQHSLVSNWMSELRSTEIQNDRLRFRRNLERVGQVIAY
                     EISKTLEWKEQEIQTPLGSHNSKVLTEQPVLATILRAGLPLHHGLLSYFDRADNAFIS
                     AYRKHHRDGTFQISLEYLSCPSIDDRIVIMCDPMLATGASVVAALRSLQTVGNPSQIH
                     IASAIAATVGIEYVLREFGEKLYIWCGDIDDELTAKGYIVPGLGDAGDLAFGPKTQI"
     gene            4526..5260
                     /locus_tag="VEV83_12125"
     CDS             4526..5260
                     /locus_tag="VEV83_12125"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK45912.1"
                     /translation="MRHLLLMVCICVFGAANAQFSFYGQAGANYTDIRITRTTGIEKD
                     DGGFGWQMIGGLEYHTQFGYFLYMGAGLRHQAYERDSLSYYYQDTAYQYLYKPLFINF
                     PFGIGWKFPLDKNVGLKVYGGMNMQVGLGGSVTKNVLYYSFDSATGSSSLVREESSKH
                     SIKYGRKTNKQYAYDLANTNWALQLGVGLTFKNSAEVALAYHHGFTNFLPNKDQAYEI
                     NKMSFIELNLKFYFPNEYLNERKKKK"
     gene            complement(5322..5858)
                     /locus_tag="VEV83_12130"
     CDS             complement(5322..5858)
                     /locus_tag="VEV83_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HYK45913.1"
                     /translation="MKTISALLALALFSSHTPVATNTIYNFKVKALDGGTIDFSQFKG
                     KKILVVNTASKCGFTPQYEGLEKLYESHKDNLVIVGFPSDNFGGQEYQQDEEIASFCK
                     KNYGVTFPLTTRVDVKGPNATPVFKYLCSKSENGVLDAEISWNFNKFIIDEHGNLLQH
                     FDSKVTPDSPELLKYINN"
     gene            complement(5895..7289)
                     /locus_tag="VEV83_12135"
     CDS             complement(5895..7289)
                     /locus_tag="VEV83_12135"
                     /inference="COORDINATES: protein motif:HMM:NF041518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor Q domain-containing protein"
                     /protein_id="HYK45914.1"
                     /translation="MKTLFGNFLLLLLTGTVPFISCTKDSLITSPDALIGLSEDTLHF
                     DTVFTSAGSVTQSLKIFNLNDQTLRLSKIELMGGGSSPFSINVNGAQGESFSNIDIAA
                     NDSIYVFVSVHIDPNQQNMPFIVRDSIHISYNGNDVFVQLDAYGRNAHFLKNVVVSHD
                     SILAGELPFVVLGSLTVQAGVTLAINKGAQIFCHQDAPIIINGTLKVNGEKAPRSQVV
                     FTNDRLDDPYKFFPGSWPGIVFSSSSIGNELNSAIIKNATQALTVYGNGSFSTQLTLN
                     ACIISNNSLGGVKAVNSNVFAQNCLITNCGLNNVSLNAGIYNFIYCTVASYSYDLLYH
                     EAPVLLISDTISNSQTAPLFARFTNDIFYGESGLFNDEIELIQNGNSFDAGFDHVLYK
                     APGLDGSLFQNSIGGADPGFANIDTEHSLFDFHLQPGSICIDAGKSLFVDTDLEGSPR
                     NVGGGPDLGCYEFQ"
     gene            complement(7308..8006)
                     /locus_tag="VEV83_12140"
     CDS             complement(7308..8006)
                     /locus_tag="VEV83_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HYK45915.1"
                     /translation="MTATKNYLDDLLHLFFPHTCSGCGTEVLNKTDVLCARCLLQLPL
                     SNFFLHAGNPVERIFYGRLPVERAGSAFYFNKDSLLQHLVIQLKYKGNQSAGIYLGKL
                     FGHALAQSKRFDDVDLIIPVPLNEKKLFIRGYNQAALLAKGISEAWRKPVSEDAVGRF
                     LFTETQTHKDRVSRWQTMEGVFTVTDATALTNKHVLLIDDVITTGATLEACGSSVIKV
                     PGTKLSIATLAYTI"
     gene            complement(8027..>8657)
                     /locus_tag="VEV83_12145"
     CDS             complement(8027..>8657)
                     /locus_tag="VEV83_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HYK45916.1"
                     /translation="RILRTVKNRFGSTAELGIYEMMGNGMRMVSNPSEILIPQKDEVL
                     SGSSIAAGMEGLRPLLIETQALVTQSVYGTPQRTSTGLDSRRLQLLLAVLEKRGGFHF
                     GVKDVFVNIAGGLRIEDPSIDLAVICALLSSYDDTSIPQNICFAGEVGLNGEIRAVNR
                     VEQRIAEAEKLGFEKIFISPFNKKSLNRSQFKIEVVAVAKVDELYRLLF"
BASE COUNT         2405 a         1968 c         1897 g         2387 t
ORIGIN      
        1 agccgggtct atttctttat tcggatcgat tttatcccgc aacgaccgga tcctcctttc
       61 gttgatgtca aagccgatca ccgaaatttt ttttgagaaa taaagggcca caggcaaacc
      121 cacgtaaccc agccctatta ccgcaagctt tgttttttta ttttgcaatt cgtcgctgat
      181 catttctttg agaattcttt tggttgtcta tgccattctt cactgggcag tgccttgaag
      241 taatcgtacg tgtttcgcaa accttctgca cgctcaactt taggctgcca tcccaacagt
      301 tgctttgctt tcgtaatatc cggttgtcgc tgttttggat cgtcaagcgg caacggtttg
      361 taaatgatat tagccgctgc acctgttacc ctcaaaacct cttccgcaaa atctttcagt
      421 gatatctcat ttggatttcc aatgttgacc ggtaatgcat aatcgctcag aagcaaacga
      481 taaatgccgt cgatttggtc atcgacataa caaaatgaac gggtttgaga tccgtcccca
      541 aacaccgtaa gatcctcgcc gcgcagcgcc tgcccgatga atgccggtaa tgcccttcca
      601 tcattcaaac gcattctcgg gccatacgtg ttgaagatgc gaacaattct tgtttccacc
      661 tggtgatatg tgtgatacgc catggtgatc gcttcttgga aacgtttggc ttcatcatac
      721 acgccccgcg ggccgacggg gttgacgttt ccccaatact cttctggttg cggatgtacc
      781 aatggatcgc cgtaaacctc gctcgtggac gcaaccagga tccttgcatt tttatccttg
      841 gccaacccga gacagttgtg cgtacccaac gagccaactt tcaaagtttg aatgggaatc
      901 tttaaataat cgatggggct cgcaggcgaa gcaaaatgca aaatgtaatc aagcttgccg
      961 ggtatgtgaa tgaacttgct tacgtcatga taataatatt cgaactgcgg caggggaaat
     1021 aaatgttcaa tattgcgcag atcgcccgtg atcaagttat ccatcgcaat aacatggtaa
     1081 ccttcctgta taaacctgtc gcacagatga gaacccagga acccggctgc ccccgttata
     1141 agaactctct ttttaatcat ggaaacttct cacaattttt tatttgttta gttgtggccc
     1201 ggcacccgct ttcctcactt cctcgcagcc caaaaatata ttattgaggg tatagttttc
     1261 aacgtttgct tattggtcgc cgaaaacaaa gtattttgca ataggttaaa gacatgtatg
     1321 cgatagttga catagaaacc actgggagcc atccggaaga aaacgggatc actgaaatag
     1381 cgatcattct tcacaacggt accgaggtag agggacgtta cgaaacgctc atcaatcccg
     1441 gaaggcggat cccttcatac atcacttacc tcaccggcat aacgaatgat gctgtattag
     1501 tagcgcccaa cttttctgac gtggctctgc atattttcaa cctgttgagt aaccgcgtgt
     1561 ttatcgccca caacgtaaat ttcgactata cattcatccg ccatcacctg atggaaaacg
     1621 gatttcactg gttacccaaa aaattatgta cgcttaagct tgcccgcaaa gctttcccgg
     1681 gtttgcacaa gtatgggctc gggcatttat gcaagacttt cgacattccc atattgcacc
     1741 gtcatcgcgc cggcagcgac gctgatgcaa ctgctgttct ttttcaaaaa atattggagg
     1801 aaggagggga gaagctgata aaagactttt tgaaaagaga caatcacgaa cagatattac
     1861 cgccgaacct gccaagggat tacatcaaca agctgccgta cgttccgggt gtatattatt
     1921 tccacgatgc aaagggaaaa ataatttatg tcggcaaagc gaaatgtttg aagaaaagag
     1981 tgttgagcca ttttacgggt ttgaataccg gaagaaagcg acaggaattt cttcgaaaca
     2041 tatactcgat cagttttact gaatgcccga ctgaatttac cgcattcatc ctggaaagca
     2101 ttgagataaa aaaatattgg ccggaatata atttcagtca aaaaagagca gatcaattct
     2161 acggcattta cctgtttgaa gactcaatcg gtttcaaacg gttggcgata gacaaaaagc
     2221 gcaagcatat tgagccggtt gccaacttca ccttgttagc cgatgcgcac cggactctat
     2281 ggaagctggt gaagcaattt caactacatc ccgcgctgtg tttcctggaa aagcaatccc
     2341 aactcacgcc atacctcgac cggcacgatt ataacgaacg cgtgataacc gcggtgactt
     2401 ttctgcagaa gaatttggga acatttgcga tcgtggagcc accggttatc ggtaatcaaa
     2461 aaagttgcgt gcttgttgag aatggcaaat tttacggcat gggaatgctg ccacacgaca
     2521 atgagaattt cgatccaata cacctcaaaa attttctcac gatataccct gagaatgaga
     2581 tgatccgcac gcttgtgaaa agttatttcc aacgcaatgc ggcgaacatc atgcatcttt
     2641 cataaccgat tgcggagctt caaatcgctt actttcttat tccttatttc aggtttctta
     2701 tttcttattc tagaacttgg gacaaggcac tcctttgcct tcggcggcgc gggtgatata
     2761 gataagtgag atttcaattc cgccgcggct ttgtgaagct gttttaagat cggacacatt
     2821 tatatcgtac gaaactccaa ttcgcacgtc gctgtactct aacccaacat acgggatcag
     2881 cgcatcgccg aaacgcatcc atgctccccc gtagaaactg gttggcttgt cagcgtcggg
     2941 attacctgca acaaattgca ttgcgccgcc taacagtgtt tcatgcgcac ctgcctgtgt
     3001 gctgaacaat ccgcttaggt gtagcgtggt tacctgccct acaggaaaat atccacctgc
     3061 atgtagcgtt gccctcggat acaaatcata gttcacaccg gtaaactctt gttttggcct
     3121 gttgatatgg taaagactca cacccgcata catattgttc ttatccgtgg tgctggcggt
     3181 atacaatata ccggcgttca catcgacgta gtttgattta agtgttgtgt tattgaaaat
     3241 ttcggaggtg gttcctgtaa agccaaacgg tgttaactgg tcttcaaact ttaacttggt
     3301 tgtgttgatc agcatgttgg aatatgtgac ctgaaatccc gcgccaagtt gatgaaaacc
     3361 gtcttcatcc aagcctttat gataagctgt cgaaaaggag aaataactga acgacacggc
     3421 agcgtctgcg cttttatcag tgtatcccat taagccaacg ccccatgtgt cggtgaacgg
     3481 aatatgacct gccaatagtg gaaaatcgac tgaagcggtg gcggtaacat acgccctgtt
     3541 tatggtgggc cattgattgc ggtaattacc tgctgcacgc agcactccat caaactttcc
     3601 cgtaaatgcc gggttcaatg tcattggtga agagaagaat tgggaaaaat gaggatcctg
     3661 tgcctgaagt tctcccatga gtaaacaaca cacaacaagt aaccttactt tcatagctca
     3721 gagttttggg aaattaatca taaattgaaa gactggtttc gaccacatac cgctgcaata
     3781 aaaacaattt ttcaaatctg agttttgggg ccgaaagcca ggtcaccagc atcacctaaa
     3841 ccgggaacaa tatatccttt ggcagttaac tcatcgtcga tatcgccaca ccaaatataa
     3901 agcttctcgc cgaattcgcg taaaacatat tcaattccaa cggtcgcggc aatggccgag
     3961 gcgatgtgaa tttgtgaggg gtttccaacg gtttgcaaag agcgtaacgc tgctacaacc
     4021 gatgctccgg tcgccaacat cggatcacac atgatgacga tccggtcatc tatcgatgga
     4081 cagctgagat attcaagact gatttgaaaa gttccgtcgc ggtgatgttt gcgataagct
     4141 gaaatgaatg cgttatcagc cctgtcaaaa taagaaagta atccatgatg taaaggcaag
     4201 ccggcgcgta agatcgttgc aagtacaggc tgttctgtaa gcactttgct gttatgggag
     4261 cccaagggag tttggatctc ctgctctttc cattccagtg ttttgcttat ttcataagca
     4321 attacctggc ctactcgttc gagattccgg cgaaaacgta aacggtcatt ttgtatctcg
     4381 gtgctgcgga gctcactcat ccaattgctg accaaactat gctgttcgct caagttggtt
     4441 accatgtaac gaagataaaa agaagtttat agccgattaa atcttcgata gataacaaat
     4501 gcttttattt gcaaaaaaat tctctatgag gcacttgctg ctgatggttt gcatttgtgt
     4561 gttcggtgct gctaacgctc aatttagttt ttacggccag gctggagcaa actatacaga
     4621 catccgcatt acacgcacaa ccgggataga aaaggatgac ggaggttttg gatggcagat
     4681 gataggcggg ctcgaatatc atacgcagtt tggatatttt ctgtatatgg gcgccggact
     4741 tcgacaccag gcttacgaac gggattcgct atcttattat taccaggata cggcttatca
     4801 atatttatac aagccactat ttattaattt tcccttcggc attggatgga aatttccgct
     4861 tgacaaaaat gtaggcctta aagtatacgg cggtatgaac atgcaggttg ggttaggagg
     4921 atcagtcaca aaaaacgttc tttactattc ctttgattct gccaccggct caagctcact
     4981 tgtgcgggaa gaatcaagca agcatagcat caaatatgga aggaaaacga ataaacaata
     5041 tgcgtatgac ctcgcaaaca ctaactgggc tcttcaactc ggcgtcggct taacttttaa
     5101 gaattctgct gaagttgcac tcgcttatca tcatgggttc acaaatttct tacccaacaa
     5161 agaccaggca tacgagatca ataagatgag ctttattgaa ctgaatctga aattctactt
     5221 tccaaacgaa tatctgaacg agcgaaagaa aaagaagtaa cgataattac gaaaatgccc
     5281 cgaaccaccg gggcatttta atttttgata ttgagattcg tttagttatt tatatacttt
     5341 aaaagttccg ggctatccgg tgttaccttg ctgtcaaaat gctgtaagag gttgccatgt
     5401 tcatcgatga taaatttatt gaagttccaa ctgatctctg catccaacac tccattttct
     5461 gatttgctgc agagatattt gaaaacaggc gtcgcattgg gtcctttcac atcaactctt
     5521 gtggtgagcg ggaaagtaac gccataattc tttttgcaga aagaggcgat ctcttcatct
     5581 tgttgatatt cctgtccgcc aaagttgtct gaaggaaatc ctacgatcac caggttatct
     5641 ttatggcttt cgtacagttt ctcgaggcct tcgtattgag gcgtaaagcc gcacttcgaa
     5701 gctgtgttta ccaccaatat cttcttgcct ttgaactgcg aaaaatctat cgtgcctcca
     5761 tcgagggcct ttactttgaa attataaatg gtgtttgtag caacaggcgt gtgggacgag
     5821 aaaagagcga gggcgagtag tgcggaaatc gttttcatga ttaaatcttt taaaatgaga
     5881 aagcgaagtt ataactattg gaattcataa caacccaaat cgggtccgcc acccacgtta
     5941 cgcggactgc cttcgaggtc ggtgtcgaca aataaagatt tgcctgcatc aatgcaaatg
     6001 gagccaggct gcaaatgaaa atcaaacaga ctgtgttcgg tatcaatatt tgcaaaaccg
     6061 ggatcggcgc cgccaatgct gttttgaaac aacgatccat caagccccgg tgctttataa
     6121 agaacatggt caaaaccagc atcaaagctg ttaccatttt gtattagctc gatctcatcg
     6181 ttaaacaagc cgctttctcc ataaaaaata tcgttcgtga accgcgcaaa gagaggagct
     6241 gtttgcgaat tgcttattgt atcgctgata agtaaaacgg gcgcttcatg atataacaag
     6301 tcgtacgaat aactggccac ggtgcagtaa atgaagttat aaatgcctgc gtttagacta
     6361 acattgttca aaccgcaatt tgtgataagg caattttgtg caaacacgtt actgttcacc
     6421 gctttcactc cgcccaaaga attattgctg atgatgcagg cgttcaatgt tagctgcgtt
     6481 gagaaacttc cattgccgta caccgtcagt gcctgcgtcg cattttttat gatcgctgaa
     6541 ttgagttcat tacctatgct gctgctggag aaaactatgc cgggccaact gcccggaaaa
     6601 aacttgtagg gatcatcaag gcggtcattg gtgaacacaa cctgtgagcg cggcgctttt
     6661 tccccgttca ctttcagtgt gccattgatg atgatgggcg catcctggtg gcaaaatatt
     6721 tgtgctcctt tatttatcgc caatgtaact cccgcctgca cggtcagtga accgagaaca
     6781 acaaacggta gttcaccggc aaggattgaa tcatgcgaga caactacgtt ttttaaaaag
     6841 tgcgcatttc tcccgtaagc atctaactgc acaaaaacat catttccatt ataactgatg
     6901 tgaatgctat cgcgtacaat gaatggcata ttctgctggt tcggatcgat gtgcactgaa
     6961 acaaaaacat aaatgctgtc gttggctgca atatctatat tcgaaaaaga ttcaccttgc
     7021 gcgccgttga cgttaatact aaacggagat gaaccgccgc ccattagttc gatcttgctc
     7081 agccgaaggg tttgatcatt caaattgaag atcttcagcg attgcgtgac agacccggca
     7141 gacgtgaaca cagtgtcaaa atgcaatgtg tcctcagata aaccaatgag tgcgtcgggt
     7201 gatgtgatca atgagtcttt tgtgcacgaa atgaaaggga cagttccggt caacaacagt
     7261 agaagaaaat ttccgaaaag cgttttcatt caaccaaaca tataacatta aatcgtataa
     7321 gcgagggtgg cgatactcaa ctttgtcccg ggtactttga tgacgcttga accacatgct
     7381 tccagcgtgg cgccagtggt gatgacgtcg tcgatcagca atacgtgttt atttgttaat
     7441 gcggttgcat cggttaccgt aaaaacgcct tccattgtct gccatcttga aacgcggtct
     7501 ttgtgagttt gagtttcagt aaacaaaaat cttccaacgg cgtcttcgct tactggcttt
     7561 cgccatgctt cgctaatccc ttttgcgagc agggcagcct ggttgtaacc gcggataaat
     7621 aattttttct cgtttaatgg aactggaatt attaggtcaa catcatcgaa acgtttcgac
     7681 tgcgcgaggg catgcccaaa taattttccc aggtagatcc ctgccgattg gttcccttta
     7741 tattttaatt ggatgacgag atgctgaagc aacgaatcct tgttaaaata aaaggcgctg
     7801 ccggcgcgct caaccggcaa cctgccataa aagatccttt caaccggatt gcctgcatgc
     7861 agaaagaaat tgctgagagg caattgaagg agacaacggg cacagagcac gtcagtttta
     7921 ttcaggactt cggtgccaca acctgaacaa gtatgcggaa aaaacaggtg caggaggtca
     7981 tccaaataat tttttgtcgc ggtcatttgg tttagggttt tagaagttaa aaaagaagac
     8041 gataaagttc gtcaactttt gctaccgcga caacttctat cttgaattga cttctgttaa
     8101 gtgatttttt attgaatggt gagatgaaga tcttttcaaa acctaatttt tctgcctcgg
     8161 caattcgctg ttcaacacgg ttcaccgccc tgatctcgcc gttaaggccc acctcacctg
     8221 caaaacaaat attttgcgga atagatgtgt catcatacga tgaaagcaat gcgcaaataa
     8281 ccgcaagatc gattgaggga tcttcaatcc gcaaccctcc ggcaatattc acaaacacgt
     8341 ccttcacacc aaaatgaaag ccgccgcgtt tttccagcac agcaagtagc aattgtaatc
     8401 ggcgggaatc gaggcctgta gacgttcgct gtggcgttcc atagacgctt tgggtgacca
     8461 acgcttgcgt ttcgatcaac aaaggacgca gaccttccat acccgctgcg atcgagctcc
     8521 cgcttaagac ctcatctttt tgcgggatca aaatttctga agggttgctg accatcctca
     8581 taccgttgcc catcatttca tagatgccaa gctcagcagt gctgccaaaa cgatttttta
     8641 cagttcgtaa gattctg
//
LOCUS       DASQJI010000426         7390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1122647,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000426 DASQJI010000000
VERSION     DASQJI010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7390
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122647"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VEV83_12150"
     CDS             <1..675
                     /locus_tag="VEV83_12150"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK45917.1"
                     /translation="DEGATVVTLDIEHKPDVKDERMLCLKCDVSDEAQVREAFQNIAK
                     RFSTLDFLINNAGIQRYGSVTETATDEWDHVMNVNLKSFFLCSKYAIPLMEKKQKGVV
                     INVASVQAFLSQKNVAAYTTAKSAILGLTRSIAVDYAPHIRCVAVCPGTIDTPMLRDS
                     ISLSPDPGEVMQECIDMHLTKRIGTPEEVAELILYLCDDKASFITGQAVRIDGGLGIT
                     IQGSKR"
     gene            859..1707
                     /locus_tag="VEV83_12155"
     CDS             859..1707
                     /locus_tag="VEV83_12155"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HYK45918.1"
                     /translation="MKIRIEDVAIFADGLDHPECVAVHPDGSVWAGGEGGQIYRISSD
                     GRDVEEVNNTKGFILGIAFSPDASWLAVCDLKNKCVWKLTVSNNKLEKFATGAAGENF
                     NIPNYAVFRRNGKLFVTESGAFRQVTGKIFCFDEDGTGKVWHGGPFNFANGAALDADE
                     KYLYLVCTWLPGVERIEINNDGSAGKREVFCTLPQTCPDGIAFDAEQNLYVACYAPNS
                     IFKVNKDEEVSLLIDDWEAHTLSNPTNIAFGGKNFDQLFSANLGRWHISRIDLQTKGM
                     KLACHC"
     gene            complement(1726..2787)
                     /locus_tag="VEV83_12160"
     CDS             complement(1726..2787)
                     /locus_tag="VEV83_12160"
                     /inference="COORDINATES: protein motif:HMM:NF040322.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase"
                     /protein_id="HYK45919.1"
                     /translation="MKPASLLLVALFACNILPAQKQSYKTAIIAFYNLENFYDTVDNP
                     NVNDEEYLPNGPKNYNSKVYRTKVEHLATVISQIGIDVNPDGPAIVGVAEIENDTVLN
                     DLVHHPLIKDRNYQVVHYDSKDIRGVDVALLFNPKYFKPIFSKKLFVQMPRGAKQSYF
                     TRDILWVSGILGDDTIHVFVNHWPSRVGGEQRSAPGRAAAALVDRRMIDSLEHNGKRA
                     KIIVMGDLNDDPISPSVMRVLNAKGRVDDISPGDLYNPWVELYKKGLGTLAYQDAWGL
                     FDQIIINSSWLDKNQTGFFYYQQHIFNKAFLIENIGKYKGYPMRTWDGNTYRGGYSDH
                     FPTYIVVLKRVEDVSASSR"
     gene            2917..5499
                     /locus_tag="VEV83_12165"
     CDS             2917..5499
                     /locus_tag="VEV83_12165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK45920.1"
                     /translation="MTKLLLALLFVSIARISKAQNVIITDTIASPDSVIIDDIKGNLL
                     DNIPVISLDDNELNDGSSQTVSSLLTAGRDPFFNAASFNFSALRFRMRGYNGDHSATF
                     INGIPMNDVSNGFAASGLWSGLNDVFHNRDITIGVRFNTFSFGDIGSTTNIDVRASKQ
                     KPQTSFGYAYSNRSYDHRVTFTHSTGLNKKGWAFTVSGSRRYANEGYAPGTYFDGWSW
                     FGAVDKKIGQRQIVSFISFFAPTESARQGSSTQEMIDLAGTHYYNPYWGYQNGKKRNA
                     NISKTHQPVIILTHDFRINNKTDVTTSLSYSFGEKSSASLDWFNAPDPRPDYYRYLPS
                     YYANDPQQQQQVADNLKNNEASRQIDWENLYNINRENITTVHNANGVTGNTVTGNRSY
                     YIQGERVTNSKKISLSTVLNARLNNTIDLTAGLSYQSLVNNYFQRIADLLGGSFWVDL
                     NQFAQREFPNDANAYQNDLNQPNQIVKTGDKYGYNYDININRAAVWSQFLFRFSRVDF
                     FIAGEGSQTIFSRTGNVKNGLFPDNSYGKSPSNVFYNYGIKGGFTYKINGRNYLYASG
                     ALITRPPYYDDAYISPRTRDALQDSLTNEQILTAEGGYILNAPRLKIHLVGYYTQTKH
                     GFNVLTFYHDEFQDFVNYALSNIDRLYFGTEFGFDANVARNLSLSGAASIGRYYYNSR
                     QKGIVSADNSSTILQVETVYSKNYRIASSPQEAYGFTVSYKSPKYWFVNLTGNYFDQL
                     WLDFNPLRRTSLATDDLSPESEKWNSVLDQQRLHPQYTVDAFAGYSWKIRHAYIGSGF
                     GRKAVYLSFYAGVNNLLNNQNIISGGYEQLRFDYSTSDIGKFPPKYFYAYGLNYFASA
                     ALRF"
     gene            5526..>7390
                     /locus_tag="VEV83_12170"
     CDS             5526..>7390
                     /locus_tag="VEV83_12170"
                     /inference="COORDINATES: protein motif:HMM:NF040146.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5689 domain-containing protein"
                     /protein_id="HYK45921.1"
                     /translation="MKTKSLLTTCNVFTIFSIACFACNKKFDSPPPYAPPNLTPTLTI
                     AQLKAQHIFGSYEIISTDDIIEGVVIANDSSGNFYKQVIIEDTSGGIAINIDDYNLYT
                     SYPEGRRVFVKLKGLIMYDDNKLIEIGGSKDANNNINPIAGSIKDQYVIKGVYGDAVT
                     PTTVDITELNDEYQNTLIRLENFEFSETDTSKVYADTSTSKNAVSYLLKNCSNKSIIL
                     RTSGFASFAGAALPNGNGSITAVYSVYNSSKQLYVRDTSDVQFYNTRCNGGPATLTSI
                     ANIRSMYSGSGVKLGAYKIAGVVISDASNKNISSGSVILQDGNAGISVYFGGTIAYSL
                     GDSIVLDVTGDSLLDYNGSLEIKALGTIKPAAVATGRTVVPQRLSIAQLSSNLSSIEC
                     TLVKISAAVATGGTTYSGNRTLTDASGNMSLFTSSAATFANNNLPTDTSDWIGYAKLY
                     GSTKEFMIRNLSDVTATDQVVGGGIELSSSPFTLNFDDLANGLPTGVSVKISSTSTSA
                     GADATFISSPTTWNNTSSGFKNYASATTLTASSDAVAQNSCTNRALGVKQTSATGYDP
                     GAAFLIHINNTIGKTNLALHFLLQSLDESAGRTTTWEVQYALGENPTSFIPVTTSP"
BASE COUNT         2114 a         1640 c         1637 g         1999 t
ORIGIN      
        1 gacgaaggcg ctaccgtggt aacacttgac atcgagcaca agccagatgt aaaagacgag
       61 agaatgctct gcttaaagtg tgatgtgtca gatgaggcac aagtgagaga agcatttcaa
      121 aacattgcca aaagattttc aaccctcgat tttttaataa acaatgcggg catccaacgg
      181 tatggttcag tgacagaaac agcaactgat gaatgggatc atgtgatgaa tgtaaatctg
      241 aagagttttt ttctctgctc gaaatacgcg attccgttga tggaaaaaaa acaaaaaggc
      301 gttgtcatca atgtggcaag tgttcaggct tttttgagtc agaaaaatgt agccgcgtat
      361 acaactgcta aaagcgcaat acttggttta acaagaagca tcgctgttga ttatgcaccg
      421 catattcgtt gcgtagctgt ttgtccgggc acgatcgaca cgccgatgct gcgcgattca
      481 atctcacttt caccagatcc gggtgaagtg atgcaggaat gtatcgatat gcaccttaca
      541 aaacgtattg ggacaccaga agaagtggct gagttgatct tgtatctgtg tgatgataaa
      601 gcttctttca tcaccgggca agcggtcagg atcgatggcg gattggggat aacgatacag
      661 ggaagtaaaa gatgatttac gattgcagat ttgcgattgc agattttgta tttacgaagt
      721 acgatttacg atctacgatt tttgaccttc atgaccgaac ggaatcatcg ttaaatgcac
      781 atgctgttga tcggggatgt tttgattttc gattgcagat tgcagatttg gctttttaaa
      841 actatcgcat aaaagactat gaaaatcaga attgaagacg tcgccatttt tgcggatgga
      901 ctcgatcatc ctgaatgcgt tgctgtgcat ccggatggtt cagtatgggc aggtggtgag
      961 ggcggccaga tctaccgcat ttccagcgat ggcagagatg tggaagaagt taataacacg
     1021 aagggtttta tccttggcat tgccttttca cccgatgcct cgtggcttgc agtatgtgac
     1081 ctgaaaaata aatgcgtttg gaaattgacg gtatcaaata ataaacttga aaaatttgct
     1141 accggcgcag caggtgagaa tttcaatatc ccgaattatg cagtcttccg ccgcaatgga
     1201 aaattattcg ttaccgagag cggcgcgttc aggcaagtga cgggaaaaat tttttgcttt
     1261 gatgaagatg gcaccggtaa ggtttggcat ggcggtccgt tcaattttgc gaatggtgct
     1321 gcgctcgacg ctgatgaaaa atatttatac cttgtctgta catggttgcc cggcgttgaa
     1381 agaattgaga tcaacaacga tggcagcgca gggaaacgcg aagtgttttg tacgcttcca
     1441 caaacgtgcc ctgatggaat tgccttcgat gctgaacaaa atctttatgt tgcctgttat
     1501 gcgcccaact cgatctttaa agtaaataaa gacgaggaag tttcattgct gatcgatgac
     1561 tgggaagcac acaccctatc caatccaaca aacattgctt tcggcggaaa aaacttcgat
     1621 cagttatttt ccgctaacct cggccgatgg catatcagca ggatagatct gcaaactaaa
     1681 ggaatgaagc ttgcctgtca ttgttaatat aagatggtga acaatttaac gcgatgatgc
     1741 acttacatcc tccactcttt tcaatacaac tatgtaagtg ggaaaatgat cgctgtaacc
     1801 tccgcggtac gtgttgccat cccaggtgcg catcgggtat cctttatatt ttccaatatt
     1861 ttcaatcagg aatgccttgt tgaaaatgtg ttgttgataa taaaagaaac ctgtttgatt
     1921 tttgtcgagc cacgaagaat ttataatgat ctggtcgaat aacccccacg cgtcctggta
     1981 agcaagcgtt ccaagtcctt tcttatacaa ctcaacccac ggattgtaca gatcgccggg
     2041 cgatatgtcg tcaactctcc ctttcgcatt caacacacgc attacgcttg gactgatcgg
     2101 atcgtcattt agatcgccca taacaatgat cttcgcccgc ttgccattgt gctcaagtga
     2161 atcgatcatt cttctatcaa caagcgccgc agcagctctg ccgggtgcgc tcctttgttc
     2221 acctccgaca cgactcggcc agtgattcac aaacacatga atcgtatcat cgccaagtat
     2281 gcccgagacc cacaaaatgt ctcgtgtaaa atatgattgc ttcgcaccac gtggcatttg
     2341 tacaaataac tttttactga aaattggttt gaaatatttt ggattaaaca gaagcgccac
     2401 atctacgccg cgtatgtctt tcgaatcgta atgcaccacc tggtaattac ggtcttttat
     2461 taacgggtga tgcacaaggt cattcaaaac agtgtcgttc tctatttcag caacaccgac
     2521 gatcgcaggc ccatccggat ttacgtcaat ccctatctgg gagatcaccg tggcaaggtg
     2581 ttctactttt gttcgataga ccttactgtt ataatttttg ggcccattgg gaagatactc
     2641 ttcatcattc acattaggat tgtcaaccgt gtcataaaaa ttttcaagat tgtaaaacgc
     2701 gatgatcgca gttttatacg actgcttttg ggcgggtaaa atgttgcatg caaataaagc
     2761 aacaaggaga agggatgcgg gtttcataaa acagtttagg ggctacaaac ctaaacaaac
     2821 ttttttttga gccgcgactt tttatttgtt tgttttccga aataatcttt ttagatttgg
     2881 tcaccaacta ttgtaaaccc ttcaactcaa ccctgtatga caaagctgct gctggctctg
     2941 ctgtttgtca gcattgcccg aatttccaaa gctcaaaacg taatcattac agatacaatt
     3001 gcaagccccg attctgtaat aatcgatgac ataaagggca atttgcttga caatatcccg
     3061 gtgatctcac ttgatgataa tgagctcaac gatggaagca gtcaaactgt ttcctctttg
     3121 ctaacggcgg gccgggatcc tttcttcaac gccgcaagtt ttaatttcag tgcattgcgt
     3181 ttccggatga gaggatacaa cggcgatcat tcagccacat tcatcaatgg cattcccatg
     3241 aacgacgtca gcaacggttt tgctgcttcc ggtttgtgga gcggactgaa cgacgtcttt
     3301 cataaccgcg atataacgat cggagtgcga ttcaacactt tctcttttgg tgatattggc
     3361 agcacaacaa atattgatgt acgcgcgagt aagcaaaagc ctcaaacaag ttttggctat
     3421 gcctattcaa atcgaagcta tgaccaccgc gttactttca cgcacagcac aggtctcaat
     3481 aaaaaaggct gggcatttac cgtctccggt agtcgcaggt atgcaaacga aggctatgcg
     3541 ccgggaacat actttgatgg atggagctgg tttggtgccg ttgacaaaaa gatcgggcaa
     3601 aggcaaatag tgtcattcat tagctttttc gcgccgactg aaagcgcgag gcaaggatca
     3661 tccacccagg agatgatcga tctcgccggc acacattatt acaatccgta ttggggttat
     3721 caaaatggca aaaaacggaa tgcgaacatc agcaaaacgc atcagccggt aataattctc
     3781 acgcatgatt ttcgtataaa caataagaca gacgttacaa cttcattgag ttattcgttc
     3841 ggagaaaaat cttcggcgag tcttgactgg ttcaatgcgc cggatccaag gcccgattat
     3901 tatcgttacc tgcccagcta ctatgctaat gatccgcagc agcagcaaca ggtagccgat
     3961 aacctgaaaa acaatgaagc atcgcggcag atagattggg aaaatcttta caacatcaat
     4021 cgcgaaaata ttactacggt acacaatgca aatggcgtaa cgggaaacac agtaaccggc
     4081 aatcgttctt attatatcca gggcgaaaga gtgactaaca gtaagaagat atctctcagt
     4141 acagtcttga atgcccggtt aaataacacg atcgacctca ccgcaggact gagttatcaa
     4201 tcactggtca acaattattt tcaacgaatc gcagacctgc tcggtggttc gttttgggtt
     4261 gacctaaacc agttcgccca gcgagaattt ccaaatgatg ccaatgcata tcaaaacgat
     4321 ttgaatcaac ccaaccaaat cgtcaagacc ggcgacaagt atggttacaa ttatgacatc
     4381 aatataaaca gggcggcggt ttggtcgcag tttctttttc gtttttcaag ggtagacttt
     4441 tttattgccg gcgaaggttc gcaaacaata ttcagtcgga ccgggaatgt aaaaaatggg
     4501 ctctttcctg ataattcgta cggcaaatct ccgtcaaatg ttttctacaa ttatggaata
     4561 aaaggtggtt tcacttataa gatcaacgga aggaattatt tgtatgcaag tggcgcattg
     4621 ataacgcgcc cgccttatta cgacgacgca tacatctcgc cgcgcacgag agatgcgttg
     4681 caggatagtt taacgaatga acaaatactg actgctgaag gcggctatat tctaaatgcg
     4741 ccgcggctca aaattcacct tgttggttat tacacacaaa cgaaacatgg cttcaacgtc
     4801 cttactttct atcacgacga attccaggat ttcgtgaact atgcactgag caacattgat
     4861 cgtttatatt tcggaactga attcggtttt gatgcgaatg ttgcgcgaaa cctgtcattg
     4921 agcggcgctg cttccatcgg caggtattat tacaacagcc ggcaaaaagg catcgtctca
     4981 gccgataact cgtcgactat tttgcaggtg gagacggttt attcaaaaaa ttatcgaata
     5041 gcctcatcac cgcaggaagc ttacggcttc accgtgagct acaagtcgcc gaaatattgg
     5101 tttgtgaatt tgacaggaaa ttactttgac cagttgtggc tggattttaa cccgctgcgg
     5161 cgcacctcgc tcgcaaccga tgacctttca ccggaaagtg aaaaatggaa ttcggtactt
     5221 gatcagcagc gattacatcc gcaatataca gtcgatgctt tcgcaggata ttcatggaag
     5281 atccgccatg cgtacattgg atcgggtttc ggcaggaaag cggtgtatct ttctttttat
     5341 gccggcgtaa acaatttgct taacaaccaa aacatcattt cgggtggata tgagcaactg
     5401 cgattcgatt actcaacgtc agatatcggc aaattcccac ccaaatactt ttatgcatat
     5461 ggcctaaact attttgccag tgctgctttg cgtttttaaa ttttttcaac cctaaatctt
     5521 gtaagatgaa aacgaaatct ctccttacta cctgtaacgt ttttacaatc ttttccattg
     5581 cttgttttgc ctgcaacaag aaatttgact cgccaccacc atatgctccg ccaaatctca
     5641 ctcctacctt gacgattgct caattaaaag cacagcacat tttcggcagt tacgagatca
     5701 tctcaaccga cgatataatt gaaggagttg ttattgctaa tgattcttcc ggaaattttt
     5761 acaagcaggt cattatagaa gataccagtg gcggcattgc catcaacatc gacgattata
     5821 atttatacac ttcatatccg gaaggcagac gggtatttgt aaaattgaaa ggcctgatca
     5881 tgtatgacga taacaagctg atagaaattg gtggcagcaa agacgcaaat aacaatatca
     5941 atcccattgc tggttctatc aaagatcagt acgtgatcaa aggcgtttac ggggacgcgg
     6001 ttactccaac aaccgttgat ataactgaat tgaatgacga atatcagaac acgctcatcc
     6061 ggctggaaaa ttttgagttc agtgagactg acacatcaaa agtttacgct gatacttcca
     6121 catcgaagaa tgcggttagt taccttttga aaaattgttc caacaaaagt attatcctgc
     6181 ggaccagcgg atttgcttcg ttcgcaggag cggctctccc gaacggcaat ggaagtataa
     6241 cggctgtata ttccgtttat aattcttcca aacaacttta tgtccgcgac acaagcgatg
     6301 tgcaatttta caatacccgg tgcaacggag gtccggctac attaacaagc atcgcgaaca
     6361 ttcgaagcat gtacagcggc agcggcgtta aacttggggc gtataaaatt gcaggcgttg
     6421 taatatctga tgcatcgaac aaaaacattt catcaggttc ggtgatcctc caggatggga
     6481 acgcgggcat ctccgtttat ttcggcggaa caattgctta tagtttaggc gactcgatcg
     6541 tactcgatgt caccggtgac tcattgctcg attataatgg gtcccttgaa attaaagctt
     6601 tggggacgat caaaccggcc gctgttgcaa ccggtcgaac tgtcgtgccg cagcggcttt
     6661 caattgcgca gctctcttca aacttgtcta gtatcgaatg cacgctggtc aaaatttcag
     6721 cagccgttgc aaccggtggc accacttact ccggcaatcg aacattgacc gatgcttcgg
     6781 gcaatatgag tctgttcaca tcgtccgcag caacatttgc gaataataat ttgccgacag
     6841 acacaagtga ttggatcgga tatgcgaagt tgtatggcag caccaaagaa ttcatgatca
     6901 gaaatttgtc ggatgtaacc gcaaccgacc aggtcgttgg tggcggcatt gaattgagct
     6961 cttcaccttt cacgttaaac tttgacgatc tcgccaacgg attgccaaca ggtgtatcag
     7021 taaagatctc atcgacgtct acgtctgccg gagcggatgc aacgttcatt agcagtccca
     7081 caacatggaa caatacgtcc tccggattta agaattacgc cagtgctaca acattaacag
     7141 caagcagtga cgcggtcgca caaaattcat gcaccaacag ggcactcggt gtaaagcaaa
     7201 ccagtgccac aggttacgat ccgggcgcag ctttcttaat tcatatcaac aacacaattg
     7261 gcaaaacaaa tcttgctctg cattttttat tgcaatcgct cgatgagagc gcaggcagaa
     7321 ccacaacgtg ggaggttcaa tatgcgctag gcgagaatcc cacttcgttt atcccggtaa
     7381 caacaagccc
//
LOCUS       DASQJI010000427         4486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_509348,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000427 DASQJI010000000
VERSION     DASQJI010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509348"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VEV83_12175"
     CDS             <1..445
                     /locus_tag="VEV83_12175"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HYK45922.1"
                     /translation="TSITTDSRPLKKIVTELLDLFGEKIHFLRDPTRGGVATVLNEVS
                     RDANVGININEKDIPVEEEVYGACEMLGLDPLYVANEGLFVSVVEASVADAFVSHLKN
                     WEQGSMAAIIGEVVPQHRKQVVLNSKIGGRRVVNMLAGEQLPRIC"
     gene            542..1333
                     /locus_tag="VEV83_12180"
     CDS             542..1333
                     /locus_tag="VEV83_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HYK45923.1"
                     /translation="MKTAIAIAAHPDDIELMMAGTLLLLQKAGYEIHYLNIASGNCGS
                     TNYSSDETKQIRLQEAKNAAQILGAHFHHPFCDDLEILYDANILRKVATIIREVKPTV
                     VLTHSPEDYMEDHVNTCRLTVTATFARGMPNFKTDPERDADNYDCTIYHALPHALRDN
                     FRRRITPGAFVNTTAVHSIKLEALKAHKSQQGWLDVSQKMNSYLQTMEDVALEVGAMS
                     KVFTYAEGWRRHLHIGFCNADDDPLKELGADYLVNKDYEDALEVL"
     gene            1369..2298
                     /locus_tag="VEV83_12185"
     CDS             1369..2298
                     /locus_tag="VEV83_12185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HYK45924.1"
                     /translation="MPRKLSSIAPGWWDYTTLDTALIEEAAALTPEIMLQLSRPGFKV
                     VVYDTLEEFYLAEALEYVSAWKQSCEDAPVGICGPIGPTEQLPLVARIINDLNIPVQS
                     GHFWGMDEWFMDGKEVPTDHPLSFEQADRELCFNRIKKELVMPDSNLHFPKADTTEYR
                     NSWNGVRCAVMQGGQGDIKHWAFNDPPKREGQYTDDPPPAGEYRKLTTRVVDLHPITI
                     AQNARTSGGGNITLVPTKAISVGPVETWMAEKVSIWHAGMHDNPFGQRLTTYMISKNI
                     VDTSVPMSLLADHPNVQFNFYRGGIGSCSVVMH"
     gene            2325..4241
                     /locus_tag="VEV83_12190"
     CDS             2325..4241
                     /locus_tag="VEV83_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HYK45925.1"
                     /translation="MKKITIATLLTVIVVNVFSQTNEKTISLIPVPVSMKIGDGNFLL
                     TKTGAIELTTNDADAKRVANFLSKKISTATGFQMPVKSASASSAGNISVSLINDATLG
                     NEGYKLEVNRNAVALSANKPAGLFYGMQTILQLLPKEIESSSPVKNISWTIPSVNITD
                     YPRFGWRGLLFDVSRHFFTKAQVETFIDNMVKYKYNVLHLHLTDDQGWRIEIKSLPNL
                     TKIGAWRPERKGAWGNLTAIAPDADEPKTYGGFYTQEDIKELVQYAKDRFVNILPEID
                     VPAHSMAAVASYPELSCTPGTYLVNASEEFQVWSGDSNRALIDNTLCPANEKVYDFLD
                     KVFTEVAQLFPFEYIHVGGDEAAKNFWEQSEDVKNLMQREGLKNVEEVQSYFVKRVEK
                     IVQSKGKKLIGWDEILQGGLAPNAAVMSWRGTQGGIDAAKQGHQVVMSPLQYTYVDLM
                     QGDPYVEPPEFGTLLFDQSYKFDPIPKGVDPNLILGGEACLWSEHTTNMRAAGYLLWP
                     RSMAVAECVWSPAENKNWTDFVRRVENHFERMDVAHIKYSRSMYNPVFHASLNKDSQL
                     VVELQTQLPLDIYYSFDETNPDDFYPKYEKPLVVPKDALHVKVISYRDGKPIGTQINM
                     PVAELIKRARTKSK"
     gene            4253..>4486
                     /locus_tag="VEV83_12195"
     CDS             4253..>4486
                     /locus_tag="VEV83_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose/galactose MFS transporter"
                     /protein_id="HYK45926.1"
                     /translation="MKKGRSGSSGSYAPMIIIGSLFFVFGFVTWVNSVLIPYFKLTCE
                     LSVKEAMLVAFAFYISYFVMAIPSSFILKKTGYK"
BASE COUNT         1322 a          915 c         1088 g         1161 t
ORIGIN      
        1 aacatcgatc acaaccgaca gtcggccgct gaagaaaatc gtgaccgaat tgcttgattt
       61 gtttggagaa aaaattcatt ttcttcggga cccgacgcgg ggcggcgtgg caaccgtgct
      121 gaacgaagtt tccagggatg cgaatgttgg tataaacatc aatgaaaaag atattccagt
      181 tgaggaagag gtatacggag cctgtgaaat gcttggcctc gatccccttt acgtagcaaa
      241 tgagggattg tttgtttcgg tagttgaagc gtcggtggct gacgcattcg tgtcgcattt
      301 aaaaaactgg gaacagggtt ccatggctgc aataatagga gaggtggtgc ctcaacatcg
      361 gaaacaagtt gttttgaaca gtaagatcgg cggccgaagg gtggtgaata tgctagccgg
      421 cgaacaattg ccgagaatat gttagaacgt ttgttccaac gtcgtcgccc tgcgaaaaat
      481 ttcctggtta tcaactttca atcgcgaata gaagttttat gtttggacta acatgcgatg
      541 aatgaaaacc gcaattgcca tagctgccca tcctgacgac attgaattga tgatggcggg
      601 aacgttatta ctgttacaga aggccggtta tgagatacat tatctcaaca ttgcgtccgg
      661 taattgcgga agcaccaatt attcttcgga cgaaacaaag cagataagat tgcaggaagc
      721 aaaaaatgcc gcgcaaattc tcggcgcgca ttttcatcat ccgttttgcg acgatctcga
      781 gattttgtac gacgcaaata ttcttcggaa ggtcgccacg ataattcggg aagtaaagcc
      841 caccgttgta ttaacgcatt ccccggaaga ttatatggaa gatcatgtaa atacttgccg
      901 gctgacagtt accgcgacgt ttgcacgcgg gatgcctaac ttcaaaacgg atccggaacg
      961 ggatgctgat aattacgatt gcacgatcta tcatgcactt ccgcatgcgt tacgcgataa
     1021 ttttcggcgc cgtattacgc ccggcgcttt tgtaaatacg accgccgttc attcgataaa
     1081 gctcgaagct ttgaaagcac acaagagtca gcagggctgg cttgatgtaa gccaaaagat
     1141 gaattcatat cttcaaacta tggaagatgt cgctttagaa gttggtgcga tgtcgaaagt
     1201 ttttacgtac gcagaaggat ggaggaggca tttgcatatt ggcttttgca atgctgacga
     1261 tgatccttta aaagaactcg gtgcagacta cctggtcaat aaagactatg aagatgcact
     1321 cgaagttctc tagtcagcga taataatttt tttattcaaa tcaaacacat gccacgaaaa
     1381 ttaagttcca ttgctcccgg ctggtgggat tatacaacat tggatactgc attgattgaa
     1441 gaagcggcgg cactaactcc cgaaataatg cttcagcttt cgcggccagg attcaaagtg
     1501 gtggtgtacg acacgcttga agaattctat ctcgctgaag cgctcgagta tgtgagtgcc
     1561 tggaagcagt catgtgaaga tgctccggta ggtatttgcg ggccgatcgg gccaacggag
     1621 caattaccgt tagtcgcgcg tatcatcaat gaccttaaca ttcccgttca atccggccat
     1681 ttctggggaa tggatgaatg gtttatggat ggaaaggaag ttccaaccga tcatccgtta
     1741 tcgtttgaac aagcggaccg cgaactctgc ttcaatcgca tcaagaaaga attggtgatg
     1801 cccgattcga atctgcattt tccaaaagcc gacacaacgg aatatcgtaa cagttggaat
     1861 ggtgttcgat gtgcggtgat gcaaggaggc cagggcgaca taaaacactg ggcatttaat
     1921 gacccgccaa aacgcgaagg ccaatacacg gatgatcctc cacctgccgg ggaatatagg
     1981 aaactaacca caagggttgt cgatcttcat ccgatcacca ttgcacaaaa tgcgcgcaca
     2041 tccgggggcg gaaatatcac acttgttcca acaaaagcga tctctgttgg gccagttgaa
     2101 acatggatgg cagaaaaagt ttctatctgg cacgcaggca tgcacgataa tccttttggg
     2161 cagcgattaa ctacctatat gatctcgaaa aatattgtag atacatccgt accaatgtct
     2221 ttactggcag atcatccgaa cgtccaattt aatttttatc gcggaggcat tggttcgtgc
     2281 tcagttgtta tgcattaaac acattttttg taaatgaaaa tgctatgaaa aagatcacga
     2341 ttgcgacttt acttactgta attgtcgtga atgtctttag tcaaacaaat gagaagacga
     2401 tctcactaat tccggtaccc gtttcgatga agataggaga tggtaacttt ctccttacaa
     2461 agaccggcgc gatcgagctc acaactaacg acgctgacgc taaacgagtg gcaaattttc
     2521 tttcaaaaaa aatttccacg gcgactggat ttcaaatgcc cgtaaagtct gcctctgcat
     2581 catccgcagg taacatctct gtgtctttga taaatgacgc aacgctggga aatgaagggt
     2641 ataagttaga agtgaatcga aacgctgttg ccttgtctgc aaacaagcca gcgggtttat
     2701 tttatggaat gcagacaatt ctgcaattgt tgccaaaaga aattgaatct tcatctcctg
     2761 ttaaaaatat ttcatggaca attccatccg taaacattac agattatccg cgttttggat
     2821 ggagaggatt attatttgat gtaagccgtc acttctttac aaaagcgcag gttgaaactt
     2881 tcattgacaa catggtaaag tataagtata acgtgttgca cctgcattta acagacgacc
     2941 agggttggag aatagaaata aaaagcttgc ccaacctgac aaagatcggt gcgtggcgac
     3001 ctgaacgcaa aggagcatgg ggtaatttga ccgcgatagc accggacgcg gatgaaccga
     3061 aaacttacgg cggcttttat acacaagagg atattaaaga acttgttcaa tatgcgaaag
     3121 acaggtttgt aaatattttg ccggagatcg acgtgcctgc acatagtatg gccgcggtgg
     3181 catcgtatcc tgaattatcc tgcacacccg gaacttatct tgtgaatgca agcgaagagt
     3241 tccaggtatg gagcggtgac agcaaccgcg ccttaatcga taatacactt tgccctgcga
     3301 acgagaaagt gtatgatttt ctcgataaag ttttcacaga agtggcacaa ctatttccgt
     3361 tcgaatatat ccacgtggga ggtgacgagg ccgcgaaaaa tttttgggag cagagtgaag
     3421 atgtaaaaaa tttaatgcaa agagaagggt taaagaacgt ggaagaagtg caaagttatt
     3481 tcgtgaagcg cgttgagaag atcgtgcaat caaaagggaa aaaattaatc ggctgggatg
     3541 aaattctcca gggaggattg gcacctaacg cggccgttat gagctggaga ggaacacaag
     3601 gtggaattga tgctgcaaaa cagggacacc aggtagtaat gtctccgttg caatacacat
     3661 atgttgattt gatgcagggc gatccctatg tggaaccgcc cgaatttggt actctgttgt
     3721 tcgatcaatc atacaagttt gatcccatac caaaaggagt tgatccgaat ttgatacttg
     3781 gcggagaagc ttgtttgtgg agcgagcaca caacaaatat gcgcgcagcc ggctacttgt
     3841 tatggccgcg gtcaatggca gtggctgaat gcgtttggtc tccggcagaa aacaagaatt
     3901 ggactgattt tgtaaggcgc gtggaaaacc actttgaaag aatggatgtc gcgcacatca
     3961 aatattcgcg cagcatgtac aacccggtct tccacgcctc attaaataag gatagtcaac
     4021 tggtggttga attgcaaaca caacttcccc tggacatcta ttactcattc gatgaaacca
     4081 accctgatga cttttatccg aaatatgaaa agccattggt ggtccctaaa gatgccttgc
     4141 atgtaaaggt aatttcatac cgggatggga aacctatagg cacacagata aacatgccgg
     4201 ttgcagaatt aataaagaga gcaagaacga aatcaaagta aaatttgttt taatgaaaaa
     4261 gggtagaagt ggttcttcag gaagttatgc gcctatgata atcatcggct cgttgttttt
     4321 tgtgtttgga tttgttacat gggtcaattc agtgctgatc ccgtatttca agctcacgtg
     4381 cgagttaagt gtgaaggagg caatgctcgt tgcttttgca ttttacatca gctacttcgt
     4441 catggcgatc ccatcctcat tcattcttaa gaagacagga tacaaa
//
LOCUS       DASQJI010000428        10713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_49166,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000428 DASQJI010000000
VERSION     DASQJI010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10713
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49166"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VEV83_12200"
     CDS             <1..894
                     /locus_tag="VEV83_12200"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK45927.1"
                     /translation="SFKEPVSRIATLPEGFADNQVNSYNSIFVDQNFVPTFQIPLAAG
                     RNFSTAFPTDSNEAFIINEAAVKAFRWKNDQAAIGKNIDWGLGKKGKVIGVVKDFNYT
                     SLHDNVKPLIIQILPEGYGFIALRVNASALPQTISTLSAKWKELIPDESFQYSFLDDD
                     FAALYQSEQNLQRVLGLFTVLSVFIACLGLFGLAAFTIRQRFKEIGIRKVIGASTLSI
                     VSLISKDFLKLVVISFLIAAPVAWFGVNKWLQNFAYQMSISWWTFVLVGAAAVFIALG
                     TISFEAIKAAVANPVKSLRTE"
     gene            1057..3441
                     /locus_tag="VEV83_12205"
     CDS             1057..3441
                     /locus_tag="VEV83_12205"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45928.1"
                     /translation="MFKNYFKSSWRNIVKNKTYSVINILGLATGMAVAMIIGLWIYDE
                     VSANKNFENYDTIYKVMMNQTFDGVRGSQEAIPYPLGAELKNKFPDFKAVAMCDWGSN
                     RSLVYGEKKISKFGHFIGEEAVSMFSLHILEGSKHPLHDPYSIVLTKETADILFGKED
                     PINKTVKLDNQTDLKVTAVVDKEPKNSSLSFDYLIPFQLEEKIYPWITQYHKTNWGNN
                     SWQAFVQLYPDANSASVNAKIKNVVISHFTDENTLKHIKPELFIHPMSKWRLYSDFEN
                     GKNTGGFIKYVRMFGILGMIVLLIACINFMNLSTARSEKRAKEVGVRKAVGSGRKQLI
                     NQFLHESMLMASFAFLLALGIVAVALPYFNKLTDKEMSLQVADPVFWLIMILFTIITG
                     LLAGSYPAFYLSSFNPVRVLKGNLKAGKRSSLPRKILVVIQFASSVVLMIGTIVVYQQ
                     IQYGKNKPIGFNNRGLISVYWSDDIAKHIESLRQELLSSGAAISICQSNSPPSEIYSN
                     NNGWEWKGSQPVEKSLPFSTITTTYDYTKTLGIKLLQGRDFSRDFADSNSVILNEAAV
                     KRMRLKNPVGEQLKWNDKPMTVVGVIPDIQMESPYRPISPLTIIFNKDWVGDLDIRLN
                     PNMSASKAIALMKPIFERYNPAYPFEYHFADEEYAKKFNYEELVGNLAAIIAVLAIFI
                     SCLGLFGLASFTAEQRVKEIGVRKVLGASVFNLWRLLSKDFVILVLLSCAIAMPVGWY
                     CMNEWLNSYQYRTSISVEVFVGVVLAALLITLFTVSFQAIKAAVANPVKSLRTE"
     gene            3549..6008
                     /locus_tag="VEV83_12210"
     CDS             3549..6008
                     /locus_tag="VEV83_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45929.1"
                     /translation="MFKNYFKTAFRSLGRNRNYSIINIAGLAVGIAVCMIIFMIIQFQ
                     TSFDDFHAKKDRIYRVLTESRHADAGTVSYAKNVPFPMPKGLKTAFPQLEEVVPVYAS
                     HNDELQVLDDNGTAVKNFKEQSGVFYTTPSFFNMFNFPLLAGSYASLKDPNNVLLTKE
                     TAETYFGNWKAAMGKTIKIAGYYSMGAGLFQFPATPLKVSGILAPIPPNTDFQLKMAV
                     AWGTDFTGDKQYGFAQPQWNQSAPDFGCYILLPPNISVNDFNQQLSAYAQKAQSADNK
                     DTYVIQPLNAVHYDSEAGNYSNKTISHQLINVLWLIAAFILLIACVNFINLSTAQAVN
                     RAKEIGVRKVLGSNRSQLRMQFIVETFLIVTIAVMLAAGITLFTLPYVNGLLELSLSF
                     NILANPAVISFLLALTVVVTLLAGFYPSIVLARFNAVNALKSKLTVNTVKGISLRRGL
                     VVFQFVIAQALIIGTLIIVKQMDFFMDQPLGFDKDAIVNVSYRPDSTGVKLTDYLKQQ
                     LLLNGVHSVSFNSNSPIEDNNNMFTTFKFDHALKDEDFQAISKFVDEDYVRTFKLQIV
                     AGRNLEPSGWTKEFLVNESFVKSLGLKKPEDIIGKEVSMLNGLIKCPVVGVVKDFNDR
                     SLRNSLAPLLMATNSTMYRQASIKLPTANISSTMQSIKKIWEQTFPNYVYEYKFLDDK
                     IATFYKQENQLSQLYKIFAGIAIFLSCLGLYGLASFMAAQRIKEVGIRKVLGASSVNI
                     VYLFSKEFVVLIAIAFAIATPIAWYYMHGWLQNYAYRIDVSLWLFAAGGLAAIFIALA
                     TISFQAIKAAVANPVKSLRTE"
     gene            6125..8530
                     /locus_tag="VEV83_12215"
     CDS             6125..8530
                     /locus_tag="VEV83_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45930.1"
                     /translation="MLKNYLKTAWRNIRRNKLFSAINILGLSIGIATCFIIMLYVQDE
                     LSYDRFNEKADRIYRIAFKANIDGGKIFEGNVMPPVAAALKNDYPEVEEATRISLNGD
                     TKITYNNKTFKESKLATVDSNFFSVFTLPFIKGDPRTALMEPHNIVLTKDMAQKYFNR
                     EEPIGKLLKIDNESFQVTGVIENIPANSHFHFDFFAPLSDLPYARDPTWMASGMFTYI
                     VLKKGYDYKKLEAKFPGMVEKYMGPQVEQAFGVSLAQFRTKGNELGFVLQPLTSIHLY
                     SNTNFELEPGGNASYVYIFGVIAIFMLIVACINFINLSTASASKRAKEVGVRKVAGSG
                     KLQLVSQFLSESVLITLFALVIGLVLIQVALPTFNNISGKHLSFSIGPIIAFVALGLF
                     IGIIAGIYPAFYLSSFKPIAVLKGRLTANNNSFGLRSSLVVFQFFISVALIISTIVVY
                     QQMKFIQNKKLGYDKEQILTLPNSYALGKNEQVYKQQMLKDPRIVNATASGYKPAGPT
                     NDNNALVYPQGHDNKMMKTVDYHIDEQYIPTLGMQMAAGRNFSSALATDSSGMIINES
                     AARAFGWNNNTALDKTIVWVNSTKGDKFPFHVIGVVKDFHFKSLHEPITPLLMTLQPE
                     GGLIFKIRTTDVAGLLATMKKQWDAFNTDEPFTYAFLDDLYNKTYSAEQKTGIILNIF
                     SVLIIFVACLGLFGLATYTAEQRTKEIGIRKVLGASVAQVTQMLSKEFLKLVLIASLI
                     AFPVAWWAMNKWLQSFAYRIDISWWIFLVAGSAAILIALVTVSFQAIKAAIANPVRSL
                     RTE"
     gene            8694..>10713
                     /locus_tag="VEV83_12220"
     CDS             8694..>10713
                     /locus_tag="VEV83_12220"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK45931.1"
                     /translation="MFKNYFKTAWRALSKHKAYSIINVLGLTLGIASCVVIFLVVQYE
                     LNYDKFNSKADRIYRVTLNAIDFNPCISMAVAEPLRNDFPELEAVTQVQYHNSGLITI
                     RQNKYEEKGLLFADKYFPEVFDYKWIEGNSTTALAQPNSIVLTESLAKKYFGNKNAMG
                     QLINLENNYNLKVTGVIKDVPGNTHLPFKCLVSLETIRKEDEGMFSAFWAIPGGSFTY
                     IVTPPHYDISKIQNRIHWFIEKNWGKDIANAARLPLQPLTDIHFDSRYLNNTISYTTS
                     RETYYALAAVAVLIIIIACINFINLATAQAIKRAKEVGVRKVLGSSRSQLIVQFLGEI
                     SLMVSAALIFALLLVDLFLPQLSTWLDIKINIYQLAQPSVIPVISISALIIILLAGLY
                     PAFVQSSFRPAQSLKSKAVLSSGKLTLRKSLVVFQFAISQAMIIGTLVIAYQMDFFQN
                     RDLGFNKDAVISVDIPDENKNAVLKQQLVNNPGVKDVCFSSGAPVYNSYFTSLISPEA
                     GITQSDVSEVKFVDEHYIDMFQLQMLAGEKIQRTNSTENDTVYYVVVNETMIHKLGIH
                     EPQLALGKHIILNGNWQCTITGVVKDFQSESKHKAIRPCALMYRADNFYTASVKLAST
                     NMNKTIAAIDKSWSALFPQNVFNYEFLDDLIAAWYKQEQKEYTAFRLFA"
BASE COUNT         3276 a         2010 c         2295 g         3132 t
ORIGIN      
        1 tcttttaagg aacctgtttc gcgtatcgca acgttaccag aaggatttgc tgacaaccag
       61 gtaaattctt acaactcgat atttgtcgat cagaattttg tcccgacatt tcaaattcca
      121 ctggccgccg ggcgcaattt ctcaacagca ttcccaacag attccaacga agcctttatc
      181 attaacgaag ctgccgtaaa agctttccga tggaaaaacg accaggcggc gatcggcaaa
      241 aacatcgact ggggattagg gaagaaagga aaggtgatcg gcgttgtaaa agacttcaat
      301 tacacttcgt tgcatgacaa cgtaaaaccg ctgatcatac agatcttgcc cgaaggttac
      361 ggctttatcg cattgcgggt gaatgcatct gccctgccac aaacaataag tactttatct
      421 gcaaaatgga aagagcttat tcctgacgag tcgtttcaat attcatttct tgacgatgat
      481 tttgctgcgc tttatcagtc cgaacaaaat ctccagcgtg ttttgggctt gttcacggtg
      541 ctttccgttt tcatcgcatg tctcggcctt tttggtttgg ccgcatttac gatcaggcag
      601 cgatttaaag aaataggaat aagaaaagtt atcggggcaa gcacgttgag cattgtgtca
      661 ttgatttcaa aagattttct aaagctggtg gtaatatcgt ttttgatcgc tgccccggta
      721 gcctggtttg gggtgaataa atggctgcaa aattttgcat accagatgag cataagctgg
      781 tggacgtttg tgcttgttgg tgcggctgcg gtttttattg ctcttggaac gatcagcttc
      841 gaggcgataa aagcggcggt ggcgaatccg gtgaaatcgt taaggacgga atgattaaga
      901 atgaataatg agtgatgagt aatgagtttg tgaatgcctc cgtgtgacaa gataggtgaa
      961 tcgataatct gacaaatcga aaatgataaa tcagacatca ttagatcaga tatccccgcc
     1021 tgactgacgg aagtcgggca cgagaaatca acttctatgt ttaaaaatta tttcaagagt
     1081 tcctggcgca atattgtaaa gaataaaacc tattctgtta ttaatatcct gggattggca
     1141 accggcatgg ctgtggcaat gatcatcggc ttatggatct acgatgaagt gtcagcgaac
     1201 aagaacttcg aaaattacga tacgatttac aaggtaatga tgaaccagac gtttgatggc
     1261 gttcgtggtt cacaggaagc gataccgtat cccttaggcg ctgaacttaa aaataaattt
     1321 cccgatttta aggctgtggc gatgtgcgac tggggctcaa accgttcatt ggtttatggt
     1381 gaaaagaaga taagcaagtt tggtcatttt attggtgaag aagctgtttc aatgttttct
     1441 ttacacatac ttgaaggaag taaacatcct ttgcatgatc cgtattctat tgttttaaca
     1501 aaagaaacag ccgatatact tttcggcaaa gaagatccga tcaataaaac tgtcaagctc
     1561 gataatcaaa ctgatttgaa agtaacggca gttgtggaca aagaaccgaa aaacagttcc
     1621 ctctcttttg attatttaat cccattccag ttagaggaaa agatttatcc atggataaca
     1681 cagtatcata aaaccaattg gggtaataat tcatggcaag catttgtaca actctatcct
     1741 gatgctaatt ccgcaagtgt aaacgcaaaa atcaaaaatg ttgtgatctc tcattttaca
     1801 gatgagaata cattgaagca tatcaaaccg gaattgttca ttcatccaat gtcaaagtgg
     1861 aggctctaca gtgactttga aaatggtaaa aacaccggcg gctttataaa atatgtaaga
     1921 atgtttggga tcctgggtat gatcgttttg ctgatcgcct gtatcaactt tatgaattta
     1981 agcaccgcac gttctgaaaa aagagcaaaa gaagttggtg ttcgtaaagc cgtcgggtca
     2041 ggaagaaagc agctcattaa tcaattctta catgaatcaa tgttgatggc ttcgtttgca
     2101 tttttattag cacttggtat agtggcggtt gctttgcctt attttaataa actaacagat
     2161 aaggaaatga gtttgcaggt agccgaccct gttttttggt tgatcatgat cttgttcacg
     2221 attattaccg gtttgctggc aggaagttat cccgcgtttt atctttcttc tttcaaccct
     2281 gtgcgcgtgt tgaaaggaaa tttaaaagca gggaaaagaa gttcattgcc aaggaaaata
     2341 ttggttgtga tccagttcgc aagttcagta gtattaatga tcggaacgat cgtcgtttat
     2401 cagcaaatac aatatggaaa gaacaaaccg atcgggttta ataatagagg attgatctct
     2461 gtatactggt ctgatgacat cgctaaacat attgaatcac ttcgccagga attgctcagt
     2521 tcaggcgcag ccatttcaat ctgtcaaagc aattcacctc cgtcagaaat ttacagcaat
     2581 aacaatggtt gggaatggaa gggaagtcag cctgtcgaaa aatctctgcc gttttcaaca
     2641 ataaccacta catatgatta cacaaaaaca ttagggataa aattattgca aggcagagat
     2701 ttttcaaggg attttgccga ttctaattca gttattttga atgaggcggc agtaaaacgc
     2761 atgcggctga aaaatccagt gggtgaacaa ttgaagtgga acgataaacc tatgactgtt
     2821 gttggcgtga tacctgacat tcaaatggaa tcgccttatc gtccgatctc accgctcact
     2881 attatattca ataaagattg ggtgggtgat ttagatattc ggctaaaccc aaatatgtct
     2941 gcatcaaagg cgattgcttt aatgaagccc atttttgaaa gatacaatcc tgcttatcct
     3001 tttgaatatc atttcgccga tgaagagtat gcgaagaaat ttaattatga agaactcgta
     3061 ggtaatctgg ccgccatcat tgcggtgctg gcaattttca tttcatgcct cgggcttttt
     3121 ggtttggcat cgttcacggc cgaacaaagg gtgaaggaaa taggagtaag aaaggtgctt
     3181 ggtgcgagcg tatttaattt gtggcgcttg ctttcaaaag atttcgtgat actggtattg
     3241 ttgtcatgtg cgatcgcaat gcctgttggc tggtattgta tgaacgagtg gctgaacagc
     3301 tatcaataca gaacgagcat tagtgttgaa gtttttgttg gagtggtgtt agcagcgctg
     3361 ctgatcacgt tgttcacagt aagtttccag gcaattaaag ctgcggtcgc aaacccggtg
     3421 aagagcctcc gcaccgaata gctacggctc tcaaagagag cctgacaacg gagtagtcaa
     3481 tttgaaaatt tgataatttg aaaatgaaaa tcagacatcg ataaatcaga catcagaaat
     3541 taacttttat gtttaagaat tattttaaaa ccgcattcag gagtttaggc cgcaacagga
     3601 attacagtat tatcaatatc gccgggttgg cggttggcat tgccgtttgt atgatcatat
     3661 ttatgatcat tcaatttcaa acaagcttcg atgattttca cgcaaagaaa gatcgcatct
     3721 atcgtgtgct gactgaatct cgtcatgcgg atgccggaac tgtttcttac gcaaagaatg
     3781 ttccttttcc aatgccgaag ggattgaaaa cggcatttcc ccaattagaa gaagttgttc
     3841 ctgtttatgc aagccacaat gatgagttgc aggtgcttga tgataatgga accgctgtaa
     3901 agaattttaa ggaacagagc ggtgtatttt atacaacgcc atcattcttt aacatgttta
     3961 atttcccgct actggcaggt tcatatgcat cgttaaaaga tccgaacaat gtattgctca
     4021 caaaagagac tgcagaaacc tatttcggca attggaaagc tgcgatgggc aaaaccatca
     4081 aaatagcagg gtattatagc atgggtgccg gattgtttca gttcccggca acgccgctaa
     4141 aagtttcagg cattctcgca cccataccgc caaacacaga ctttcagcta aaaatggcgg
     4201 ttgcctgggg aacagatttt actggagata aacaatacgg attcgcacag cctcaatgga
     4261 atcaatcggc gcctgatttt ggttgttata ttttgttacc gccgaatatt tccgtcaatg
     4321 acttcaatca acaattgagt gcatatgcac aaaaggcgca atcggcagac aataaagaca
     4381 cctatgttat acaaccattg aatgccgtgc attatgattc agaagcagga aattacagca
     4441 acaaaacgat cagccatcag ctgatcaatg tactgtggct gatagcagca tttattcttt
     4501 taattgcctg cgtaaacttt atcaatctct ccaccgcgca agctgtcaat cgcgcaaagg
     4561 aaattggtgt aagaaaagtt ttgggaagta atagatctca attgcgaatg cagttcatcg
     4621 ttgaaacatt tttaatagtt actatcgctg tgatgcttgc cgcgggtatc acgcttttta
     4681 cattgcctta cgtaaatgga cttttagagc tttcgctttc attcaacata ctggccaatc
     4741 cggcagttat ttcatttctt ctggctttaa cagtggtcgt gaccttactt gccggttttt
     4801 atccttctat tgttttagca cgttttaatg ctgttaatgc gttgaagagt aagctaacgg
     4861 taaatacggt aaagggaatt tcactacgaa gagggctggt agtgtttcaa tttgtcattg
     4921 cgcaggcgct gatcatcggg acactcatta ttgtaaagca gatggacttc ttcatggatc
     4981 agccattagg attcgataaa gacgccatcg taaatgtttc ttaccgtcct gatagtaccg
     5041 gcgtaaagct gacagattat ttaaagcagc agttattgtt aaatggtgtg cattccgtaa
     5101 gcttcaattc caactcgccg atagaagaca acaataacat gtttaccaca ttcaaatttg
     5161 accatgcgtt aaaagatgag gacttccagg ctatcagcaa attcgtggac gaggactatg
     5221 tgcgcacctt taaattacaa atagtagccg gaagaaattt ggaaccgtcg ggttggacaa
     5281 aagagttttt agtgaatgaa tcattcgtga aaagtttagg gcttaaaaag ccggaagata
     5341 taattggcaa agaagtaagc atgctgaatg gcttgataaa atgcccggtt gttggtgtgg
     5401 tcaaagattt taacgacagg tctttacgga atagcctggc accgttgctc atggcgacta
     5461 acagcacgat gtaccgccag gcttctataa aacttcccac agcgaacatt tcatccacca
     5521 tgcaatcgat caaaaaaata tgggagcaaa cttttccgaa ttatgtttat gagtacaagt
     5581 ttctcgatga caagattgca actttttata aacaggaaaa ccagttgtcg cagttgtata
     5641 aaatttttgc gggtatcgct atattcctta gctgtcttgg cttgtatggt ttagcctcat
     5701 tcatggctgc acaaagaatt aaagaagttg gaataaggaa agtactgggc gcatcgtctg
     5761 tcaatattgt ttacctgttc tcgaaagagt ttgtggtcct tatcgccatt gcctttgcaa
     5821 ttgctacacc tattgcatgg tattatatgc acgggtggtt gcagaattat gcttaccgca
     5881 tcgatgttag cttatggtta tttgctgcag gcggactcgc tgcaatattc attgcattgg
     5941 caacaataag tttccaggca ataaaggcag cggtggcaaa cccggtgaag agccttcgca
     6001 cggagtagat gcggctctcg aggagtttga gaacggaatg aataatttga aaatttgatg
     6061 atttgaaaat ttgaaaatgg aaaaaaccga tatcaaaata tcatagatcg ataaatcaag
     6121 tgctatgcta aaaaattatt tgaaaaccgc atggcgaaac attcgcagga acaaattgtt
     6181 ttctgctatt aatattcttg gcttatctat cggcattgca acatgcttca tcattatgtt
     6241 gtatgtgcag gatgaactga gctatgatcg ctttaatgaa aaggcagaca gaatttaccg
     6301 cattgctttt aaggcaaaca ttgacggagg aaaaatattc gagggcaatg taatgcctcc
     6361 ggtagcagcg gctttaaaaa atgattaccc tgaagtagag gaagcaacaa gaataagtct
     6421 gaacggggac acaaaaatta catataataa caaaacattc aaagaaagca agctcgccac
     6481 agttgattca aattttttta gcgtgtttac gcttccattc attaaaggtg atccgcgaac
     6541 agcgttaatg gagcctcaca atattgtgct gacaaaagat atggcacaaa agtatttcaa
     6601 cagggaagaa ccgatcggca aactgctgaa aattgacaat gaatcatttc aagtaaccgg
     6661 tgttattgaa aacatacctg ccaactctca ttttcatttt gatttttttg cgcccctgtc
     6721 tgatcttcct tatgcaagag accccacgtg gatggcgtcg ggcatgttta catacatagt
     6781 gttgaagaaa ggatatgact ataaaaagct ggaagcaaaa tttcctggga tggttgaaaa
     6841 atatatgggt ccgcaggttg agcaggcatt cggcgtcagt cttgcgcaat tcagaacaaa
     6901 aggtaatgaa ttaggttttg tattacagcc tttgacttct atccatttat attcaaacac
     6961 caattttgaa ttagaacctg gcggcaatgc aagctatgtg tacatttttg gcgttattgc
     7021 catttttatg ctgatagttg catgcattaa ctttattaac ctgtcaacag caagtgcctc
     7081 taaacgtgca aaggaagtag gcgtaagaaa agtcgcaggt tcgggaaagc ttcaactcgt
     7141 gagccagttt ttatcagaat cagtgttgat cacgttgttt gcactagtca ttggattggt
     7201 gttgatacag gttgcgctac ccaccttcaa caatatttcg ggaaagcatt taagcttcag
     7261 tattgggccg ataattgcat ttgttgcgct gggtttattc attggcatca tcgccggtat
     7321 atatcctgca ttttatctgt cttcattcaa gcctattgct gtattaaaag gtaggctaac
     7381 cgctaacaac aacagttttg gattaagaag cagtcttgtg gtgttccagt tttttatttc
     7441 cgttgcactg atcataagca ccattgttgt ttaccagcag atgaagttta tccagaacaa
     7501 gaaattaggc tacgacaaag aacagatctt aacgctgcct aattcttatg cgcttggaaa
     7561 aaatgagcag gtatataaac aacaaatgct gaaagaccca cgcattgtaa acgcaaccgc
     7621 ctccgggtat aaacctgccg gtccgacaaa tgataataat gcgctcgttt atccgcaggg
     7681 acatgacaat aaaatgatga aaactgtaga ctatcacata gatgagcaat acattccaac
     7741 cttaggcatg cagatggcag caggcagaaa tttctcgtcc gctcttgcaa ccgattcttc
     7801 aggcatgatc ataaatgaaa gtgcggcgag agcttttggc tggaataaca atacagcact
     7861 ggataaaacg atcgtatggg ttaatagcac taaaggagat aagttcccgt ttcatgttat
     7921 tggtgtggta aaagatttcc attttaaatc gctgcacgag ccgatcacac ctttactgat
     7981 gactttgcag ccagaaggtg gtttgatatt caaaataaga acaacagatg ttgccggttt
     8041 attagcaacg atgaaaaagc aatgggatgc attcaacacc gacgagccat tcacttatgc
     8101 tttcctggat gacctatata acaaaactta ttctgctgaa caaaagacag gaatcattct
     8161 caacatattt tctgtactta tcatatttgt tgcctgtctt ggtttgtttg ggttagccac
     8221 ctatacagca gagcagcgta ccaaagaaat cggcatacga aaagtattag gcgcaagtgt
     8281 agcacaggta acacaaatgc tttcaaagga atttttaaag ctggtattga ttgcatccct
     8341 catcgcattt cccgttgcat ggtgggcaat gaacaaatgg ttgcaaagtt ttgcgtatcg
     8401 cattgatatt tcatggtgga tatttcttgt tgcaggatca gctgctatat tgatcgcatt
     8461 ggtaacagtg agttttcagg caataaaagc agcgatagca aaccccgtga ggagccttcg
     8521 cacagagtaa gcttgcgccg ccgctgtagc tttatcgcag acgggaagag tttgggaacg
     8581 gaataagtca atttgaaaat gaaagatcag agatcattag atcagacatc agagatcatt
     8641 agatcagaca tccccgcctg gctgcggcgg tcgggcagga gaaatcagct tctatgttta
     8701 aaaattattt caaaacagca tggcgcgctt taagtaaaca taaggcctac agcatcatca
     8761 atgtgctggg acttacgctt ggcattgcat catgtgttgt tatttttttg gtggtacagt
     8821 atgaattgaa ttatgataaa ttcaattcaa aagcagacag aatttaccgc gttacattga
     8881 atgcaattga ttttaatcca tgtatctcaa tggccgttgc ggaaccgctt cgtaacgact
     8941 tcccggaact ggaagcggta acgcaagtac aatatcataa ctcaggattg ataacaatca
     9001 ggcaaaataa gtatgaagaa aaaggattgc tgtttgccga taaatacttt cctgaagttt
     9061 tcgattataa atggattgaa ggaaactcga caaccgctct tgcacaacca aactctattg
     9121 tgcttactga aagtttagca aagaaatatt tcggcaacaa aaatgcaatg gggcaactta
     9181 tcaatcttga aaataattac aacttaaaag taacaggtgt tattaaagat gtgccgggca
     9241 atacgcattt accttttaaa tgtcttgttt cactggaaac gataagaaaa gaagacgaag
     9301 gaatgttctc tgcattttgg gcaatacccg gcggaagctt tacttatatt gttactccgc
     9361 cgcactatga tatttcaaaa attcaaaacc gcatccattg gtttatagaa aaaaactggg
     9421 gaaaggatat tgcgaatgcg gcacgacttc cgttacaacc tttaaccgat attcattttg
     9481 attcgcgcta tctcaacaac accatcagtt ataccacatc aagagaaacg tattatgcgc
     9541 ttgcagccgt agctgttctt attattataa ttgcctgtat taacttcata aaccttgcaa
     9601 ctgcgcaggc aattaaacgg gcaaaagaag ttggtgtaag aaaagtattg ggttcaagcc
     9661 gttcacaatt gatagtacaa tttcttggtg aaatttcttt aatggttagt gccgctttaa
     9721 tttttgcatt actgcttgtt gatttattct taccacaact ttcaacctgg cttgatatta
     9781 aaatcaacat atatcaactg gcgcaacctt cagttattcc agtcatatca atatcagcgt
     9841 tgattattat cctgcttgca ggattgtatc ctgcatttgt gcaatcgtca tttcgccctg
     9901 ctcaatcatt aaagagtaaa gctgtattgt cttcaggcaa attaacgttg cgcaaaagcc
     9961 ttgttgtatt tcagtttgcc atttcgcaag ccatgattat aggaacattg gttattgcat
    10021 atcaaatgga tttttttcag aaccgggatc ttggttttaa taaagatgca gtaatctccg
    10081 ttgatattcc cgacgaaaac aaaaacgcgg ttttaaaaca acaattagta aataacccgg
    10141 gagttaaaga tgtatgtttc tcatcaggcg ctcctgttta taacagctat ttcacgagcc
    10201 ttatttcgcc tgaagcaggc attacacaat cagatgtttc ggaagtaaaa tttgttgatg
    10261 aacattacat tgatatgttt cagttgcaga tgcttgcagg tgaaaaaata cagcgaacca
    10321 attcaacgga aaatgacact gtatactatg ttgtagtgaa tgaaacaatg atacataagc
    10381 tgggcattca tgaaccacag cttgcacttg gcaaacatat tattcttaat ggcaactggc
    10441 aatgcacaat tacaggtgtt gtaaaagatt ttcaaagtga atcaaaacac aaggcaataa
    10501 gaccatgtgc cctaatgtat cgtgcagata atttttatac agcgagtgta aaacttgctt
    10561 caacgaatat gaataaaaca atcgctgcta ttgataaatc atggtctgcg ttatttcctc
    10621 aaaatgtatt taactatgaa tttcttgatg acttaattgc agcgtggtat aaacaggaac
    10681 agaaagaata tacagcattc aggctttttg cgg
//
LOCUS       DASQJI010000429         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2199673,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000429 DASQJI010000000
VERSION     DASQJI010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2199673"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VEV83_12225"
     CDS             complement(<1..1123)
                     /locus_tag="VEV83_12225"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HYK45932.1"
                     /translation="MIKLKWMAFLMCLVYSAAHAQIKLPRLISDSMILQRDAKLKIWG
                     WASAGEKITVNFDDHSYHTITGKDGKWLITLAPMKVGGPYDMMIAGTNNIIIKNILIG
                     DVWVCSGQSNMELPMERLKDKYPDVIAAASNGNIRQFNVSTHYDFKSPQEDLPSGSWE
                     TATPSSVLHFTAVGYFFAKKIFEKYHVPIGLIKTAVGGSPAEAWLSEEALKEFPAYLQ
                     TVEKLRNDKYVDSIKRSDSAATAAWYNNIWQKDKGLHDEKKWFDTSYDAASWQTMNVP
                     AYWEDAGLKNTHGAVWFRREFDVPRSMTGQPARLFLGNVVDRDSVYINGIFVGATQYQ
                     YPPRKYAIPSGLLHEGKNIIVVRVINYSGAGGFYKDKPYR"
     gene            1223..>1630
                     /locus_tag="VEV83_12230"
     CDS             1223..>1630
                     /locus_tag="VEV83_12230"
                     /inference="COORDINATES: protein motif:HMM:NF015604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA];
                     GO_process: GO:0045493 - xylan catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /protein_id="HYK45933.1"
                     /translation="MKKYFLLLVYCFTLGFLRAEDGYRLWLRYDKIDDDNLLAQYRNS
                     ISSIHFTNSSATLDAAKAELLNGLSGLLVKNITEQELIENGSIVAGPAGDPTIHALIQ
                     ANIFHKIGKEGFVIETRNYSGKNIIVIAANNNIG"
BASE COUNT          433 a          394 c          316 g          487 t
ORIGIN      
        1 aacgatacgg cttgtcttta taaaaaccgc ctgcacccga ataattgatc acgcgcacaa
       61 caatgatgtt ttttccttcg tgcaaaagcc cggatggaat cgcatatttt cttggcggat
      121 actgatattg cgtggcgccg acaaaaattc cattgatgta aacggaatct ctgtcaacta
      181 cattacccaa aaaaagtcgc gcaggttggc ccgtcatcga tcgcggcaca tcaaattccc
      241 tacgaaacca tacagctcca tgtgtatttt ttagacccgc gtcttcccaa taagccggta
      301 cgttcatcgt ttgccacgaa gcggcatcat aactcgtatc aaaccatttt ttttcgtcat
      361 gcaggccttt atccttttgc cagatgttgt tgtaccacgc tgctgttgcg gcactgtcgg
      421 agcgttttat actgtcaaca tatttatcgt tccttagttt ttcaaccgtt tgcaggtatg
      481 ccggaaattc ttttaatgct tcctcgctca accatgcttc tgcaggcgag cctcccaccg
      541 ccgtttttat caaaccgatc ggaacatgat atttttcaaa tatttttttt gcaaaaaaat
      601 atccaacggc tgtaaaatga agaacactcg acggcgttgc ggtttcccaa cttcccgaag
      661 gcaggtcttc ctgcggtgat ttaaaatcat aatgtgtaga aacattgaac tgcctgatgt
      721 tcccgttact tgctgctgcg atcacatcag gatatttatc cttcaatctt tccatcggca
      781 actccatgtt cgactggccg gaacaaaccc aaacatcacc gatcaaaata ttttttatta
      841 ttatgttgtt agtcccggca atcatcatat cgtaagggcc accgactttc atcggtgcga
      901 gcgtgatcag ccatttgccg tcttttcccg tgatcgtgtg ataactgtga tcatcgaagt
      961 ttacagtgat cttttctccg gcagatgccc agccccaaat ttttagtttt gcatctcttt
     1021 gcaggatcat gctgtcgctg atcagccgcg gcaattttat ttgcgcatga gctgctgaat
     1081 acaccaggca catgaggaat gccatccatt tcaacttgat caaaattttg taacgaatat
     1141 aatttagaaa gtgcctctca tccgcaaaat aattctatag ttttacaact acccggtaaa
     1201 cagtcgctac tcgttccgca gtatgaaaaa atattttctc ctgctcgttt attgctttac
     1261 gcttggtttt cttcgtgcag aagacggtta tcgtttatgg ctgcggtacg acaaaataga
     1321 tgatgataac ctgttagcgc aatatcgaaa ttcgatctcc tccattcatt ttaccaattc
     1381 ttctgcaaca cttgatgccg cgaaagcaga actgctgaat ggcttgagtg gattgctcgt
     1441 caaaaatatc accgaacaag agttaattga aaacggttcc atcgtcgccg ggcccgccgg
     1501 cgatccaact attcacgcac ttatccaagc aaacattttt cacaagatcg gcaaggaggg
     1561 gtttgtgatt gaaaccagaa attacagtgg aaaaaacatt atcgtcatag cggcgaataa
     1621 taatatcggt
//
LOCUS       DASQJI010000430        10045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_203470,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000430 DASQJI010000000
VERSION     DASQJI010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10045
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203470"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1955)
                     /locus_tag="VEV83_12235"
     CDS             complement(<1..1955)
                     /locus_tag="VEV83_12235"
                     /inference="COORDINATES: protein motif:HMM:NF025009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK45934.1"
                     /translation="MSLIQRIRDKAAWIIFGAIALALLAFIVQDAFMRRGNFFGSGST
                     IGKVNGESIEHDEFQKKVDFYDQANGGQVERNQLTANVWDYMVNQAIMQQQVDKLGLA
                     LTSNERSDVLFGNNPPPWMQQAFTDPKTGLFDATTAKKQFAAIKSEANDPKYATLNEY
                     VDNAMMQRLGEKYQSLINGAAYVPKWMSEKMSADANSVAKASYVYVPYASISDSAVKV
                     SDEEMEAYIKKNAARFKHDEETRSVSYVSFSAAPSKDDSLTVQTELNQLKNEFAATTD
                     EKSFLNTKGSEAQYYNSLISGKEIKQAIKDTLFTLPPGAIYGPYLDGGNYVLAKMVAK
                     QAIPDSAKVRHILVATHQRDQNSGNLIRIRDDSAAARRLDSAITLIKNGASFDSVCLK
                     YSDDPGSKAIGGVIDYFPTGQMDENFNDFSFAGKPGDTKKVHSVFGYHYVEILGQRGS
                     TTGYKIAYLSKPIVASSETDNAANNAAAQFAAQSRNDKDFEANAKKQGLTITAAPEFK
                     ENDYAIPGLGESRTLVKWAFDGKVGEVSQPENVGDKYVVAIITTINEKGLSSVQAVRQ
                     VVEPLVRNEKKAQIIIGQQMKGSTLEEYAKNAHQQVQTVDSLSFRSFIVPGLDNEPQF
                     IGAAFNKQIQGKVSSPIAGMKGVFVLKG"
     gene            2470..3486
                     /gene="nadA"
                     /locus_tag="VEV83_12240"
     CDS             2470..3486
                     /gene="nadA"
                     /locus_tag="VEV83_12240"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HYK45935.1"
                     /translation="MIDINIPEAEAKLTARGFLDMQIDPTLDLFHEIELLKKEKNAVV
                     LAHYYQEPDIQDVADYIGDSLGLAQQAAKTSADVIAFAGVHFMAETAKILNPTKKVVL
                     PDLNAGCSLADSAPADEFNAFKQKHPGHIVISYINCSADIKAMSDIICTSSNAEKIID
                     SIPQNQPIIFAPDKNLGAYLNKKTGRNMILWNGACMVHEIFSQQKIAKLKSKNPRAKV
                     IAHPECEEAVLQYADFIGSTTQLLKFAVNDDAQEFIVATEAGILHQMQKDAPHKTFIP
                     APPDNLCACNDCPHMKLNTLEKLYLCLKYEQPEIIMEEGLRRAALKPILRMLEISKAA
                     GLGG"
     gene            complement(3492..4577)
                     /locus_tag="VEV83_12245"
     CDS             complement(3492..4577)
                     /locus_tag="VEV83_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanylyltransferase"
                     /protein_id="HYK45936.1"
                     /translation="MNKHYYAAILAGGLGTRFWPKSRASLPKQFLDILNIGETLIQSA
                     YRRYASFIAPENIFIITTDEYVDIVQKQLPEIPAENILAEPSRKNTAPCVAYMSFKLL
                     QKDPSAALIIAPSDHVVTDTKTFEQLSLKGLSFAKKQHAFVTLGIKPTYPNTGYGYIQ
                     YDTSPQSERNVFKVKTFTEKPDLELAKTFLASGDFLWNAGIFMWNVKDVVDAFEQYEP
                     EMHELFASEKDNFNTEKEKEAIHRIYPLCVSISIDYAIMEKADNVYVIPAAFGWSDLG
                     TWNSAYTNLKKDQKGNALAGDNIINIDSTNSMISANHEKLLVLQGLDDFIVVDTNDVL
                     LICKKEKEQQVKEFLAEVKKKKGEKFL"
     gene            complement(4596..5561)
                     /locus_tag="VEV83_12250"
     CDS             complement(4596..5561)
                     /locus_tag="VEV83_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HYK45937.1"
                     /translation="MKRSLIQSAAYTIEQEAKAIASLATFLDDSFDAAVNTMHDAGGR
                     IVITGIGKSAIVAQKIVATLNSTGSPALFMHAADAIHGDLGMIQADDVVLMLSKSGDS
                     DEIKVLVPLIRNFGNTIIGIVGNMQSFLARNADIVLNTTVDEEACPNNLAPTSSTTAQ
                     MVMGDALAIALMQLKGFDGSDFAKFHPGGNLGKRLYLRVNDVYKLNEKPSVDETTSFK
                     NVILEITRGRLGATVVLDESKKIKGIITDGDIRRLFQNVDETKDLKASDIVIANPKTI
                     VNDALAVKALERMNELNINQLVVVDTEGNYLGFIHLHDLIREGII"
     gene            5800..8103
                     /gene="recQ"
                     /locus_tag="VEV83_12255"
     CDS             5800..8103
                     /gene="recQ"
                     /locus_tag="VEV83_12255"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HYK45938.1"
                     /translation="MATKKIAAKERQETPVLKKSSARKSLKTIPSVSSNGSKHDIFAA
                     LNQHFGFDKFKERQEEAINSLLDGRDTFVIMPTGGGKSLCYQLPALIQPGCAIIVSPL
                     IALMKNQVDLVRGYSEKDTVAHFLNSSLNKGQIKEVKDDLVTGKTKLLYVAPETLTKQ
                     ENLDFFRDLTISFFAVDEAHCISEWGHDFRPEYRRLREMMDSINPEIPVVALTATATP
                     KVQSDIVKNLGLRNPNIFISSFNRPNLYYEIQPKIKKDQTVKSLVRFISQNPHKSGII
                     YTLNRKTTEELAELLVANNIKAVAYHAGLDSKLRAERQDLFLNEDVQVIVATIAFGMG
                     IDKPDIRFVIHYNIPKSIENYYQETGRAGRDGLEGNCILYYSHKDVSKLEHLMRDKPL
                     SEREVGAQLINESVAYAESSVCRRKILLHYFGEHRSEETCGNCDNCLHPKEKIEAKEE
                     VVKALKVIKALDEKFPAEYVVNILVGKVTPQLAMFRHEGMPEFGIGKDKDEHFWNSLL
                     RQMLLANIIRKDIEEYGLLKFTEAGVKFVKKPLSFKIVLNNLFEEANADDDEGEGNGT
                     GAAADERLFEMLKELRQEEGKRKKLPPFVLFLETSLQDMATMYPTTLQELEKCQGVSK
                     GKALKFGKPFVELIGRYVDENDIEKPDDFVMKSVANKSSNKIYIIQNVDKKIPLETIA
                     RNKDLRLDGLLDEMETIVASGTRLNLDYAIDDMMLDDDDQDEIIDYFKNTENSSLQVA
                     QEELSDSGYNWEQLKLMRIKFLSEYGN"
     gene            8235..9326
                     /gene="gcvT"
                     /locus_tag="VEV83_12260"
     CDS             8235..9326
                     /gene="gcvT"
                     /locus_tag="VEV83_12260"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HYK45939.1"
                     /translation="MKNTPFTQKHIQLGAKMAEFAGYNMPISYTGINDEHAAVRNNAG
                     VFDVSHMGEFILKGDQALDLIQRVTSNDASKLNAGKAQYSCLTNDSGGIVDDLIVYCI
                     EENSVYMLVVNASNIEKDWNWIKQHNSSNAEMHNISDKTCLLAIQGPNATKLLQPLTD
                     IDILNLKYYTFVKGKFAGVDNVLISATGYTGAGGVEIYFENKNNDADLIWDAIFEAGK
                     KEGIKPIGLGARDTLRLEMGYCLYGNDIDDTTSPLEAGLGWITKLNKPTDFTSKEILA
                     KQKAEGIRRKLIGFEMIDRGIPRHDYIIKNKDGENIGKVTSGTQAPSLGKAIGMGYVD
                     VKHAALDKEIFIDIRNNPVKARVAKMPFA"
     gene            9620..>10045
                     /locus_tag="VEV83_12265"
     CDS             9620..>10045
                     /locus_tag="VEV83_12265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45940.1"
                     /translation="MSADTFALTDVKLIDGTGGPEKDHQTILVEHGRIIEVGEKSAIR
                     VPAGTNIIPCSGKTVIPGMVMMHEHMYYGESVRPFYIVVEMPVSFPGLYLAGGVTTMR
                     TAGCVEPQTDLNLKRWIDEGQIIGPDIDVTSPYIERAAFM"
BASE COUNT         2864 a         2196 c         2216 g         2769 t
ORIGIN      
        1 cctttcaaaa caaagacacc cttcataccg gcgatcgggc tgcttacctt tccctgtatt
       61 tgtttgttga acgctgctcc aatgaactgc ggctcattgt ccaatcccgg aacgataaaa
      121 gacctgaagc tgagactgtc aacggtttga acttgctggt gagcgttctt agcatactcc
      181 tccagcgtgc tgcctttcat ttgttgcccg atgattatct gggccttctt ttcattccga
      241 accaacggtt caactacttg ccgaacggcc tgcaccgagg aaagaccttt ttcatttatc
      301 gtggtaatta tcgcaactac atatttatcg ccaacgtttt cgggctgtga aacttcaccc
      361 accttgccat caaaagccca ctttaccaga gtgcggcttt ctccaagacc tggtatcgcg
      421 tagtcatttt ccttaaattc aggagctgcc gtgatggtaa gaccttgctt tttggcattg
      481 gcctcaaaat ctttgtcatt acggctttgg gcggcgaatt gagcagcggc gttgtttgca
      541 gcattatccg tttcagaact tgccacgatc ggcttcgaca aataggcgat cttgtagcct
      601 gtcgtgcttc cacgctgacc caggatctca acatagtgat acccaaaaac agagtgcacc
      661 ttcttagtgt cgccgggctt tcccgcaaac gaaaaatcgt tgaagttttc atccatctga
      721 cccgtgggga aataatctat gacccctccg atagccttgc tgcccggatc atctgagtac
      781 ttgagacaaa ctgaatcgaa agaagcgcca ttttttatta aggtgatggc actgtcgagc
      841 cttctcgctg ctgcactgtc gtcacgtatg cgaatcaggt tgccggaatt ctgatccctc
      901 tgatgagtgg cgaccaatat atgacgcact ttcgctgagt cagggatcgc ttgctttgct
      961 accattttcg cgagtacgta gttgcctcca tcaaggtacg gtccatatat tgcaccgggc
     1021 ggcaacgtaa acaacgtgtc cttaattgcc tgcttgatct cctttccact aataaggcta
     1081 ttataatatt gagcctcgct cccctttgta ttcaaaaaac ttttttcgtc tgttgtagca
     1141 gcaaactcat tctttaattg attgagttcg gtctgaacgg taagagaatc atctttactt
     1201 ggcgccgcgc tgaaacttac ataggaaacg gatcttgttt cttcatcatg tttaaagcgt
     1261 gctgcgtttt tctttatgta tgcctccatc tcttcgtcgg aaacttttac agcactatca
     1321 gaaatgcttg cataaggaac atacacatac gatgctttag ctaccgagtt tgcatcagca
     1381 ctcatcttct cactcatcca ttttggaaca taggctgcgc cgtttataag cgactggtat
     1441 ttttcgccca gcctttgcat catcgcgttg tctacatatt cgttcagtgt tgcgtatttc
     1501 ggatcattgg cctcgctctt aattgctgcg aattgttttt ttgcagtggt cgcatcgaac
     1561 aaaccggttt tcggatccgt gaacgcttgt tgcatccaag gcggcggatt gttgccaaac
     1621 agcacatcag accgttcatt ggatgtgagc gccaacccca atttatcaac ctgttgctgc
     1681 attatggcct ggttcaccat ataatcccaa acgtttgcag ttaactggtt tcgctccacc
     1741 tgtccgccgt tcgcctggtc ataaaagtca actttcttct gaaactcatc atgctctatt
     1801 gactcgccgt ttacttttcc tattgtactc cctgagccaa agaaatttcc tctgcgcatg
     1861 aaagcatcct gaacaatgaa agccagcaac gcaagtgcaa tcgctccgaa aatgatccag
     1921 gcggctttat cccggatcct ttgtatcagt gacattctct aaattttaaa ggatggcaaa
     1981 agtaagggaa tccgacctgc taacaaactg tgtattttgg ggcttgagat cgccgctggc
     2041 aaaccacttc cggtttccac ggctttctgt gaaacacatt taaacaccgc ttgttaaaaa
     2101 cgtgcagcat tttgttatca agcggagcga tcatcctgcc gcaaagtgcg caataaacta
     2161 ataactccgc gaaaaaaagc agcgaacagc aaaacgaaga tttaacccac attttacgcg
     2221 gctgtttata acatggacaa tgtgtgaatt gccattgtgg attttacaag tcgaaataat
     2281 caacatccgt taaaagctgt ttaaagataa ctgagcgttt aaaaacacgc tgtgcagaag
     2341 gtgtgcgttt agttggtata agtgggcaat aattaacttt gcccattgtg aataataaag
     2401 ttttattcat atccacaccc gtagtagtaa tagtcttttt taaaaaaaat agtttttaat
     2461 ataaatacta tgattgatat taacattcct gaggctgaag cgaaactcac cgcccgggga
     2521 tttttagata tgcaaatcga tccaaccctt gatctgtttc atgaaataga attgctgaaa
     2581 aaagaaaaaa atgctgtcgt gctcgcgcac tattaccagg agccggatat ccaggacgtt
     2641 gcagattata ttggtgatag cctgggcctg gctcaacagg cagcaaaaac aagtgctgat
     2701 gttattgcgt tcgctggcgt gcattttatg gctgaaactg cgaagattct aaatccaaca
     2761 aaaaaagttg tgttgcccga tctgaatgcc ggctgttcgc ttgccgatag cgctccggcc
     2821 gatgaattca atgctttcaa acaaaaacat ccgggccaca ttgttatttc ctacattaat
     2881 tgcagcgccg atatcaaggc gatgagcgac attatttgca cgagcagcaa cgcggaaaaa
     2941 ataattgata gtatccctca aaatcaacca ataatttttg caccggataa gaatcttggc
     3001 gcatacttga ataagaaaac ggggcgtaac atgattttgt ggaacggtgc ctgcatggtg
     3061 cacgaaatat tcagccaaca aaagatcgca aaattaaaat cgaagaaccc gcgcgcaaag
     3121 gtgatcgctc atcctgagtg cgaagaggcc gtgttgcagt acgcagattt cattggcagt
     3181 acaacacagc ttctaaaatt tgcagttaat gatgatgcgc aggaattcat tgtcgcaact
     3241 gaagctggta tacttcacca gatgcaaaaa gacgcgccac ataagacttt cataccagca
     3301 ccgcccgaca atttatgtgc atgcaacgat tgtccgcata tgaaattaaa tacgctcgaa
     3361 aagctgtacc tgtgtttaaa atatgagcaa ccggaaatta taatggaaga aggtctgcgc
     3421 cgggcagctt tgaaacccat tctgcgtatg ctcgaaatca gcaaagctgc aggtctgggt
     3481 ggctgagttc actataaaaa cttttcaccc tttttctttt ttacctctgc aagaaattct
     3541 ttgacctgct gttctttttc tttcttacaa atgagcagaa catcattcgt gtcgaccacg
     3601 ataaaatcgt caagtccctg gagcacaagc aatttctcat ggttcgcgga gatcattgaa
     3661 ttcgttgaat caatgttaat gatattgtcg ccggccagtg cattgccttt ttgatctttt
     3721 ttgagatttg tgtaagcact attccatgtt cctaggtcgc tccatccgaa tgcggcaggg
     3781 ataacgtaaa cattgtctgc cttctccata attgcgtagt caatggaaat gctaacacat
     3841 aatggataaa ttcggtgaat cgcttccttt tctttttcag tgttgaaatt gtctttttca
     3901 gaagcgaaca gctcatgcat ttcaggctcg tactgttcaa atgcatccac aacatctttt
     3961 acattccaca tgaatatgcc ggcgttccat aaaaaatcac cactggccag gaacgttttc
     4021 gccaattcaa ggtccggctt ttcggtaaat gttttaacct taaaaacatt tcgttcactt
     4081 tgcggcgatg tatcgtattg tatgtagcca tagccggtgt ttggatacgt tggctttata
     4141 ccgagcgtca caaacgcgtg ttgctttttc gcaaaagaca gtcccttcaa acttagttgc
     4201 tcaaatgttt tggtatcagt taccacatga tcgctgggcg caatgatgag cgctgcagat
     4261 ggatcctttt gcaaaagttt aaatgacatg tatgcaacac agggagccgt attctttctg
     4321 cttggctccg caagaatatt ttcagcagga atttcgggca attgtttttg cacgatgtca
     4381 acatattcgt cagttgtaat gatgaatatg ttttccgggg caatgaagga ggcgtacctg
     4441 cgatatgcgg attgaataag cgtttcgcca atattcagaa tatctaaaaa ttgttttggg
     4501 agtgatgccc tgctttttgg ccaaaaccgc gtacccaaac ctccggccag gatcgctgcg
     4561 tagtaatgct tattcataaa atgggcgcaa atgtattaaa ttattccttc gcggataagg
     4621 tcatgcaaat gaatgaaacc gaggtaattt ccttcagtgt caaccacaac gagttgattg
     4681 atgtttaact cattcattct ttcaagggct ttaacggcta acgcatcatt gactatggtt
     4741 ttcggattcg caatcactat atcagatgct ttcaaatctt ttgtttcgtc aacattttga
     4801 aaaagtcgcc tgatatctcc gtcggtgatg atccctttta ttttttttga ttcgtctaga
     4861 actactgtgg ctcctaatct ccccctggta atttcaagaa ttacattttt gaatgacgtg
     4921 gtttcatcca cagacggctt ttcattgagt ttataaacgt catttacccg caaataaaga
     4981 cgttttccaa ggttgccgcc gggatgaaat tttgcgaagt cagatccgtc aaaacctttg
     5041 agctgcatga gcgcaattgc aagcgcatcg cccattacca tttgcgctgt cgtgctgctg
     5101 gtaggagcaa gattatttgg acaagcttcc tcgtcaacgg tcgtgtttaa aacaatatca
     5161 gcattccggg cgagaaaaga ttgcatattt ccaactatcc cgataattgt gttgccgaaa
     5221 ttccggataa gaggaacaag aacttttatt tcatcgctgt cgccgctttt acttagcatc
     5281 agcaccacgt cgtctgcctg gatcattccg aggtctccat gaatagcatc tgccgcgtgc
     5341 ataaaaagag caggacttcc agtggaatta agcgttgcga caattttttg tgcaacgatt
     5401 gcgctttttc caattccagt tattacaatt cgcccgccgg catcgtgcat tgtatttact
     5461 gcggcgtcga aagaatcatc taaaaatgtt gcaaggctcg cgattgcttt tgcctcttgt
     5521 tcaatcgtat aagcagctga ttggattaaa ctcctcttca ttctcgcaaa aataaacttt
     5581 agcaacaatg aatcggctga cggataacat agcagcttct aactttaacg aaatgaggcc
     5641 gataaaaacc tcccaaagac tttatttttg tttatatccg tcgaaaaaca attcatcatc
     5701 ctgcgtcaaa gcaaattgtg attttgaaat tttgagggaa acacttaact taaaagcttt
     5761 ttacggctcc ccgcttgagc ttcggaaatt ttgtgaacaa tggcaacaaa gaaaatagct
     5821 gcaaaagaac ggcaggaaac accagttcta aaaaaatcat cggcacgcaa aagtctcaaa
     5881 acaataccat cagtaagcag caacggttcg aagcacgata ttttcgccgc cttgaatcag
     5941 cattttggat tcgataagtt caaagaacgg caggaagagg cgatcaacag tttacttgac
     6001 ggcagagata cgtttgtgat catgccaaca ggcggcggta agagtttgtg ttatcaactt
     6061 cccgctttga tacaaccggg ttgcgcaatc attgtgagtc cgcttatcgc gctgatgaaa
     6121 aaccaggttg atcttgtacg cggctacagc gaaaaagaca ctgttgccca tttcttgaat
     6181 tcatcgttga acaaagggca aatcaaggaa gttaaagatg atctcgtaac cggcaagaca
     6241 aagcttctct atgtggctcc agaaacattg acaaagcagg agaatctcga tttcttccgc
     6301 gatcttacca tctcgttttt tgcagttgat gaagcacact gtatctcaga gtggggacat
     6361 gactttaggc cggagtaccg caggttacgc gaaatgatgg actctatcaa tcctgaaatt
     6421 cccgttgtgg cccttacagc aacggcgact ccaaaggtgc aaagcgatat tgttaagaat
     6481 ctcgggttgc gcaatccaaa tatttttatc tcttcgttca atcgtccgaa cttatactac
     6541 gagatccagc caaaaattaa gaaggatcaa acggttaaga gtcttgtacg cttcatttcg
     6601 caaaatccgc ataagagcgg gatcatttat acgcttaacc gaaagacgac tgaggaactt
     6661 gctgagttgc tggttgcgaa caacattaaa gcggtagcat atcacgcggg ccttgactca
     6721 aaattaagag cggaacgcca ggatttattt ttgaatgaag acgtgcaggt gatcgtggca
     6781 actattgcgt ttggaatggg tatcgacaag ccggatatca ggtttgtgat ccattacaat
     6841 attcccaagt cgatagaaaa ttattaccag gaaaccggtc gcgccggaag ggacggtctt
     6901 gaaggtaatt gcattttgta ctattctcac aaggacgttt ccaagctcga gcatttgatg
     6961 cgtgacaaac ctttgagtga aagggaggtt ggcgcgcaac tgataaacga atcggttgct
     7021 tatgcggaga gctccgtttg ccgcagaaaa attttgcttc attatttcgg ggaacatcgt
     7081 agtgaggaga cttgtggcaa ttgcgacaac tgtttgcatc cgaaagaaaa aattgaggcc
     7141 aaagaagagg ttgttaaagc gttgaaggtg atcaaagccc tggacgaaaa atttccggcg
     7201 gaatatgtgg taaacatatt ggttggaaaa gttacgccgc agttggcgat gttcaggcat
     7261 gaaggaatgc cggaatttgg aatagggaag gacaaggatg aacacttttg gaacagcctg
     7321 ctccggcaaa tgttgctggc aaacatcatt cgcaaagaca ttgaagaata tggactcctg
     7381 aagttcaccg aagctggcgt caaattcgtg aagaagccgc tttcgtttaa gatcgtttta
     7441 aataatcttt ttgaagaagc gaacgccgat gatgacgaag gagaaggcaa tggaacagga
     7501 gctgctgcag atgaacgtct ttttgaaatg ctgaaggaat tacggcagga agaaggaaaa
     7561 agaaaaaagc ttccgccgtt cgtgctgttt cttgaaacat cgctgcagga catggcgacg
     7621 atgtatccca ctacactgca ggaacttgaa aaatgccagg gtgtaagcaa aggaaaggct
     7681 ttgaaatttg ggaaaccttt tgttgaactg atcggaaggt acgttgacga aaatgatatt
     7741 gaaaaaccgg atgattttgt aatgaaatcc gttgccaaca agagcagcaa taaaatttac
     7801 atcattcaaa acgtagacaa gaagatcccg cttgaaacta ttgcccgtaa taaagatctt
     7861 cggctcgatg ggttactcga tgaaatggag acgatcgttg caagcggcac gagacttaat
     7921 cttgactacg caatcgacga tatgatgctt gacgatgatg accaggatga gatcatcgat
     7981 tacttcaaga acaccgagaa ttcttctttg caagttgccc aggaggagct ttcggatagc
     8041 ggttataact gggaacaatt gaaactgatg cggataaagt ttttgagtga gtacgggaac
     8101 taatctcaca agtacacaac gggtcatgcc aaatcaacct ttatttttta ctcacgttca
     8161 tcccggctac ttttgctgtg ctactttgct tgtcaaataa cttttcaaac attcatgcgc
     8221 cttagcgttt tagtatgaag aatacaccct tcacccaaaa gcatatccag cttggagcta
     8281 aaatggccga gtttgccggt tacaatatgc cgatcagtta tacgggcatc aatgatgaac
     8341 atgctgcagt gcgcaacaat gcaggtgttt tcgacgtaag ccacatgggc gaattcattc
     8401 tgaagggcga ccaggcactg gaccttatac aacgggtaac gtcaaacgac gcttccaagt
     8461 tgaatgccgg caaagcccaa tatagttgcc tgaccaatga tagcggaggt atcgtagatg
     8521 atctcatcgt ttattgcatt gaagaaaata gcgtgtatat gctggttgta aatgcaagta
     8581 atattgagaa ggattggaac tggataaagc aacacaacag cagcaatgcc gaaatgcaca
     8641 acatcagcga taaaacctgc ctgctggcga tccagggacc gaacgcaacc aaattgttgc
     8701 agcccctcac cgacatagat atactcaatt tgaaatacta cacatttgta aaaggaaaat
     8761 ttgcgggcgt tgacaatgtg cttatcagcg caacaggata cacgggcgca ggcggcgttg
     8821 aaatttattt cgaaaacaaa aacaatgacg ccgatttaat ttgggatgcg atttttgagg
     8881 ccggcaaaaa ggaaggaata aaacccatcg gcctgggcgc aagggatacg ctgcgtttgg
     8941 agatgggata ttgcctgtac ggaaacgata tcgatgacac tacctctcct ttagaagccg
     9001 gccttggctg gataaccaag ctcaataaac caaccgactt tacatcaaag gaaattttag
     9061 cgaaacaaaa agccgaaggt atcaggcgaa aattgatagg ctttgaaatg atcgaccgcg
     9121 gaataccccg gcacgactat attataaaaa ataaagacgg cgaaaatatt ggcaaggtca
     9181 cgagtggcac gcaagcgcca tcacttggta aggcaattgg aatgggttat gtggatgtga
     9241 agcatgccgc gctggataag gaaatcttta tcgatatacg caacaaccct gtaaaagcac
     9301 gcgttgcaaa aatgcccttc gcataacagg aagccaacaa ttttaccagc cgcattgctg
     9361 gtggcccgcc tacaatctta tttcttttat ctagagaaag gtttttaact ttcattagct
     9421 ccagctcacc gtctaagcgc aaagtttcta atcgtgcgaa ttttttcgaa caaaaaggga
     9481 gaccttaaga ctcgaagatc acaaaaaacc aaaaactatt agagcgaagt tcgtcggcag
     9541 tttgctcatc gcgataattg tcttcacgga aaaaaattta tgtcagtcat tttctgaatc
     9601 tgtcaagcct tttatttccg tgagtgcaga cacattcgct ttaaccgatg tgaaacttat
     9661 tgatggtacg ggcggccctg aaaaagatca tcaaacaatt cttgtagagc acggacgcat
     9721 tatagaggtg ggtgagaaaa gtgcaattcg ggttcctgcc ggaacgaaca tcattccatg
     9781 cagtggcaaa accgtaattc ccggtatggt tatgatgcat gagcatatgt attatggcga
     9841 atcagtcagg ccgttttata ttgtcgttga gatgcctgtt tcattcccgg gtctatacct
     9901 ggcaggcggt gtaacgacta tgagaacggc gggatgcgta gagccgcaaa ccgatcttaa
     9961 tcttaaacga tggatcgatg aagggcagat cataggcccc gacattgacg tcacgtcgcc
    10021 ctacatagaa cgcgccgcat tcatg
//
LOCUS       DASQJI010000431         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1585031,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000431 DASQJI010000000
VERSION     DASQJI010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585031"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1726
                     /locus_tag="VEV83_12270"
     CDS             <1..>1726
                     /locus_tag="VEV83_12270"
                     /inference="COORDINATES: protein motif:HMM:NF016071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PPC domain-containing protein"
                     /protein_id="HYK45941.1"
                     /translation="FILISASRAAETEPNNDRASANTLALNGNNTGVINPAGDQDWWK
                     VTTTADGKLDITLTPLGGHLTWIYLYDNNGTSELASSNANTTFTVTKDGLAAGTYYIK
                     IICYFASDTSNYNISDALTTPAQANDAEPNDTKAQAITLALNNSTTGHAGYYYNLHRD
                     TSDWYKLTTNADGRIQLSLTPANGKIVWVYLYDNNGTTLLTSANSGTPFTTSKDGLAA
                     GTYYVRVICYFANSDYAPYTLKDSLFTPTQANDVEPNDSRATAVSLAANKKVTGHVGY
                     YYNLKRDTADWYKITLKNDGLLRLSLTPHAGFIAWIYLYDNNGTTVIASANANNTFTV
                     NADGLAAGIFYVKVSCYFASDYTPYTLTDTLFTYANAQDAESNARPYLAKTMPANGTS
                     TGHVGFYYNNSRDTVDWWKINYTGTGALTVIANFEPRKVQGTNSLTYMEIWKDTLAAP
                     IYSNNTDHPSLVAQLNSLTQGYYWVRVRCYFASEFQSYSLLDTFTQVNIAAVKATSYD
                     TAASCSNINSVTFSCSGSSAPYTVKLYRYNVLYATKTAKVKNITFDSLPVGSYYAKAW
                     GDGATGNAF"
BASE COUNT          503 a          417 c          385 g          421 t
ORIGIN      
        1 cttcattctc ataagcgctt caagagccgc tgagaccgaa ccgaacaatg acagggcatc
       61 tgcaaatacg cttgcattga acggcaacaa caccggcgtc atcaatccgg ccggcgacca
      121 ggactggtgg aaagttacta cgacggccga tggaaaatta gatattacgc tgacgccctt
      181 gggtggccac ctcacgtgga tttaccttta tgataacaac ggcacatctg agctcgcttc
      241 cagtaacgca aatacaacgt ttactgtaac taaagacgga ctggcggcag ggacttatta
      301 tataaagatt atctgctact ttgcaagtga tacgtcgaac tataatattt ccgacgcctt
      361 aaccactcct gcacaagcaa atgacgcgga accgaacgat acaaaagcgc aggcaataac
      421 cttagctcta aataattcaa ccaccggaca cgccggctat tactataacc ttcaccgcga
      481 tacttccgac tggtataaac tcacaaccaa tgccgatggc cgcatacaat tatctcttac
      541 gccagccaat ggcaaaattg tctgggttta cttgtatgat aacaacggga ccacgctcct
      601 tacctcggca aattcgggga ctccgtttac gacgagtaag gacgggcttg cagcaggaac
      661 atattacgtt cgggtaatat gttatttcgc aaattcggat tatgcacctt acactttaaa
      721 agatagttta tttacgccga cacaggcaaa cgatgtggaa ccgaatgact caagagcgac
      781 tgcagtttcg ctggcggcga ataaaaaagt aacgggccat gtaggatact attacaatct
      841 gaaaagggac actgcggact ggtataagat aactctgaaa aatgacggtc ttttgcggct
      901 gtcgctaaca cctcatgccg gcttcatcgc ctggatctat ctatatgata ataacggaac
      961 gacggttatc gcttcggcta atgcaaataa cacattcacc gtgaacgccg acggactggc
     1021 tgcgggaatt ttttatgtaa aagttagttg ttatttcgca tcggattata caccatatac
     1081 attaaccgac acgttattca cttacgcaaa tgcgcaggat gcagagagta atgcccggcc
     1141 ttatcttgcg aaaacgatgc cggcaaacgg aaccagcaca ggccatgtag gattttatta
     1201 taacaattcg cgagataccg tcgattggtg gaagataaac tatacgggta caggcgcttt
     1261 aacagtgatc gccaattttg agccgcgaaa agtgcaaggc acaaactcgc tcacttacat
     1321 ggagatatgg aaggatacgt tagctgctcc tatttattcg aataatacgg accatccttc
     1381 cttggtcgcc caactgaact cactaacgca gggttattac tgggttagag tgcgctgtta
     1441 tttcgcctct gagttccagt cttattcact gctcgatact tttacgcagg tgaatatcgc
     1501 tgcagtaaaa gccacatcat atgacacggc cgcaagttgc tcgaatatca actcagtaac
     1561 gttcagctgc agcggcagca gtgcacctta cacggtgaag ttgtatcgtt ataacgttct
     1621 gtatgcaaca aaaaccgcga aagtgaaaaa cattacattc gattccttgc cggttggctc
     1681 gtattatgcg aaagcatggg gcgacggcgc taccggcaac gcattc
//
LOCUS       DASQJI010000432         2176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1585077,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000432 DASQJI010000000
VERSION     DASQJI010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585077"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2176
                     /locus_tag="VEV83_12275"
     CDS             <1..>2176
                     /locus_tag="VEV83_12275"
                     /inference="COORDINATES: protein motif:HMM:NF016071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PPC domain-containing protein"
                     /protein_id="HYK45942.1"
                     /translation="FILISASRAAETEPNNDRASANTLALNGNNTGVINPAGDQDWWK
                     VTTTGDGRLDITLTPLSGKYMWIYIYDNNGTYLLKSGNSNSLFTVSADGLSAGTYYVK
                     IISFYAGDTNSYTISNSLIQPAQANDAEPNDTKALAKALALNGSKTGHVNYFYNGYRD
                     SADWYKITTNADGLLRLRLTSGNGQYIWAYLYDNDGVTPLKSGNTNGTIDINADGLAP
                     GTYYVLIRSFYYYLNNNYDNGGAFEPYTIADSLFTPAITNDAEPNDSVPIANTLALNG
                     STAGHSNYYYNHNRDANDWYKITTNADGLLRLRLTSGNNQFVWAVLYDKDGVTELKKG
                     NTNATIDISADGLAAGTYYVLIKSFYYYLNNNYDNGGGAFETYTLADSLFKPIEPNDS
                     EPNDSLPIAKTLAVNSSTTGHVNYYYNHKRDAADWYKITLPQDGMLRLRLTSGNGQYI
                     WAYLFDHDGSTPIQPAQNTNGTSEVKYDGLAAGTYYVRINSYYYYLNNNYDNGGGFEP
                     YTLADTLFTYSYAADVEPDDAPYQAKTLPANTSSTGHVNFFYNNSRNNVDWWKINYTG
                     SGDLKLNVIQNTWLIDGSNHYYWFQVYKDTALAPIYSQNFIGASPDINLTSLTQGYYY
                     VKIYSYYSTEHISYSITPTFTQVNVASIKAISYDTAASCSNINSITFSCTKSSAPYTV
                     KLYRYNVLYATKTAKVKNITFDSLPVGSYYAKAWGDGATGNAF"
BASE COUNT          687 a          473 c          451 g          565 t
ORIGIN      
        1 cttcattctc ataagcgctt caagagccgc tgagaccgaa ccgaacaatg acagggcatc
       61 tgcaaatacg cttgcattga acggcaacaa caccggcgtc atcaatccgg ccggcgacca
      121 ggactggtgg aaagttacta ccactggaga tggacgatta gatattacac ttaccccttt
      181 atcgggtaaa tacatgtgga tctatattta tgataacaac ggcacctact tattgaaatc
      241 tggcaattcg aacagtctat ttacggtgtc agcagacgga ttgagtgccg gaacatacta
      301 cgtaaagatt atttcgtttt atgctggtga taccaacagt tacactatca gcaattcgct
      361 tattcaacct gcacaggcaa acgatgcaga accaaacgat acaaaagcgc tggcaaaagc
      421 tttagcgtta aacggatcta agacaggtca cgtaaattat ttttacaacg ggtatcgcga
      481 cagtgcagat tggtacaaga taactaccaa tgcggatgga cttctaagac ttagactcac
      541 ctcaggcaat ggtcaataca tttgggctta tttatacgac aatgacggag taactccatt
      601 gaagtcaggc aatacaaatg gcaccataga tattaatgca gacggcctcg caccgggaac
      661 ctattatgtt ctcatacgga gtttttatta ctatctaaac aataactacg acaatggcgg
      721 cgcgtttgag ccttacacaa tagcagatag cttatttacg ccagctataa caaacgatgc
      781 agagccgaat gattctgtgc ctattgcaaa tacgttagcg ctcaacggaa gtacggcagg
      841 acattcaaat tactactaca atcataaccg tgacgccaat gactggtata agataaccac
      901 gaacgcagat gggctgttaa gacttagact tacatcaggt aataatcagt ttgtgtgggc
      961 ggttttgtat gacaaggatg gggtaactga attgaagaaa ggcaatacaa atgccacaat
     1021 agatattagt gccgatggcc tggcggccgg aacctattat gttctcataa agagttttta
     1081 ttactatctg aataataact acgacaatgg cggcggcgcc tttgagactt atacactggc
     1141 agatagctta tttaaaccga ttgagccaaa tgacagtgag cccaatgatt ccttaccaat
     1201 cgcaaaaacg ttggccgtaa attcaagtac caccggtcat gtgaattatt actataatca
     1261 taagcgtgat gctgccgact ggtataaaat aacgttaccg caggatggca tgttgaggtt
     1321 aaggctcacg tcaggcaacg gtcaatatat atgggcttat ttattcgatc atgacggctc
     1381 gacaccaata caacctgccc aaaatacgaa tggaacaagt gaagttaaat atgacggcct
     1441 ggcagcagga acatactacg ttcgtataaa tagttattat tactatctaa acaataacta
     1501 cgataatggc ggcggctttg agccgtatac attagctgac actttattta cgtattctta
     1561 tgcagccgat gttgagccag atgatgctcc ttaccaggca aaaacacttc cagcaaatac
     1621 aagctccaca ggccatgtaa atttctttta caacaattca cgcaataatg tggattggtg
     1681 gaagataaat tatacaggct ccggggacct taaacttaat gtaattcaaa acacatggtt
     1741 gattgacggc agtaaccatt actattggtt ccaggtctat aaggataccg ctctcgcacc
     1801 gatctattct caaaacttta tcggcgcatc acctgatata aacctgacgt cgttaacgca
     1861 gggatattat tacgtgaaga tttattctta ttactctacg gaacacatca gctattcaat
     1921 cacaccaact ttcacgcagg tgaacgtcgc cagtataaag gcaatctcat acgatactgc
     1981 tgcaagttgt tccaatataa actcaataac gttcagttgt accaagagca gtgctcctta
     2041 cacggtgaag ttgtatcgtt ataacgttct gtatgcaaca aaaaccgcga aagtgaaaaa
     2101 cattacattc gattccttgc cggttggctc gtattatgcg aaagcatggg gcgacggcgc
     2161 taccggcaac gcattc
//
LOCUS       DASQJI010000433         1960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1123606,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000433 DASQJI010000000
VERSION     DASQJI010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1123606"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VEV83_12280"
     CDS             <1..412
                     /locus_tag="VEV83_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK45943.1"
                     /translation="DIIMVMILTLFPLRRKQGLRLLYAVFGFGISIIVFALSENYLLS
                     FTALLIGGMLDGISVVVRGTIMQLKTPDNMRGRVLSVNGMFVNSSNELGQFESGLAAR
                     LMGVVPSVVFGGCMTIAIVVITWIKAPSLRKMEY"
     gene            complement(487..1857)
                     /locus_tag="VEV83_12285"
     CDS             complement(487..1857)
                     /locus_tag="VEV83_12285"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYK45944.1"
                     /translation="MAISMHDEKSITIVGAGLVGSLLSIFLARRGYKIKLYERRADMR
                     KNQVQAGRSINLALSDRGLLALQQVGLAEEIKGISIPMHGRYIHHIDGSTAFQPYGKE
                     GQYINSVSRATLNIKLINVAEAHGVEIFFNHKCSSIDWNKNEIKFDVTSDSLNLKPQT
                     SNFKFLFAADGAFSAVRLQHQLQHDKFDYQQYYIDCGYKELTIPATAAGDFAMRTNAL
                     HIWPRKNYMLIALPNLDKTFTCTLFFPFEGPLSFSNLDAEQKVRTFFEETFPDAVPLM
                     PNYVQEFFDNPTSSLVTVKCFPWIREEKFALIGDAAHAIVPFFGQGMNCGFEDCRILD
                     ELIEKYDGDWSVILNEYQTLRKPDADAIADLAVANFTEMREKTADPKFLLQKKIEGIL
                     HEKYPDKWIPAYSLVTFSPHVRYSEALKKGQWQENIMQHVMQTPGIEEMWNDDALHES
                     IIQKIK"
BASE COUNT          510 a          410 c          433 g          607 t
ORIGIN      
        1 cgatataatc atggttatga tactcacttt atttccgttg cgacgcaaac aggggttacg
       61 attgttgtac gcggtgtttg ggtttggaat ttcgatcatt gtgttcgcgt tgtcagaaaa
      121 ttatcttctt tcttttaccg cgttattgat cggtggcatg ctggacggca tcagcgttgt
      181 cgttcgcgga acaataatgc aattgaaaac gcccgacaat atgcgcggga gagtcttgag
      241 cgtgaacggt atgtttgtaa actcgagcaa tgaacttggg cagtttgaaa gcggacttgc
      301 agcgagactg atgggcgtcg tgccgtcagt ggttttcgga ggttgtatga cgatcgcgat
      361 tgtcgttata acatggataa aggcgccttc gcttcggaaa atggaatatt gattgtgaat
      421 tgtgaatggt gaatagtgaa tagtgcaacg tcatttcgac gtaaggagaa atctctcgca
      481 aacgttctat tttatttttt gtatgataga ttcatgaagc gcatcatcat tccacatttc
      541 ttcaattcct ggtgtttgca ttacgtgctg cataatgttt tcctgccatt gacctttttt
      601 caatgcttcg ctatatcgaa cgtgcggaga aaacgttacg agcgagtaag ccgggatcca
      661 tttatccgga tatttctcat gtaaaattcc ttcaatcttt ttctgcaata agaatttcgg
      721 atccgctgtc ttttcacgca tctctgtaaa gtttgcaacc gcaaggtctg cgatcgcatc
      781 tgcatccggt ttgcgtagcg tttgatattc gttgaggata actgaccaat cgccgtcata
      841 cttttcaatt aattcgtcca gtattctgca gtcttcgaaa ccgcaattca tgccttgccc
      901 aaagaacgga acgatcgcat gagccgcatc accaatcagt gcaaactttt cctcccttat
      961 ccatggaaag cactttacgg taaccaagga tgaagttgga ttatcaaaaa attcctgcac
     1021 atagttcggc atcaatggca ctgcatcagg aaaagtttct tcaaaaaagg ttcttacctt
     1081 ttgttccgcg tccagatttg aaaagctgag cggtccttca aaaggaaaaa agagcgtaca
     1141 cgtgaatgtt ttatcaaggt tcggcagggc gatcagcata tagttttttc gcggccagat
     1201 atgaagcgca tttgtacgca tagcgaaatc gcctgcagca gttgccggga tagttaattc
     1261 tttatatccg cagtcgatgt aatactgctg ataatcgaac ttatcatgtt gtagttgatg
     1321 ttgcaggcgt actgcagaaa atgcgccgtc tgcagcgaat aaaaatttga agtttgaggt
     1381 ttgaggtttg aggttcaacg aatcgcttgt cacgtcgaat ttgatttcat ttttgttcca
     1441 atcgattgat gaacacttat gattaaaaaa aatttcgaca ccgtgcgctt ccgccacgtt
     1501 tatcagttta atattcaacg ttgcccggga aaccgaattt atgtattgcc cttctttacc
     1561 ataaggctga aatgccgtgc tgccatcaat gtgatgaata taacgcccat gcattggtat
     1621 cgatattcct tttatctcct ctgcaagacc gacttgttgc aaggcaagca atccgcgatc
     1681 actcaatgca agattgatcg accggcctgc ctgaacctgg tttttgcgca tgtcggcgcg
     1741 acgctcgtat aattttattt tatatccgcg cctggctaaa aaaatagaca gcaacgaacc
     1801 gacaaggccg gcgccaacta ttgttatgct tttttcgtcg tgcatagata ttgccatgcc
     1861 tgcttactca ggattgtcgt tactttatgt tgttatcgtt tactgctttc atgcatgcac
     1921 atacagataa tataaaaaaa ccaaaacatt gctattggca
//
LOCUS       DASQJI010000434        14726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1432998,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000434 DASQJI010000000
VERSION     DASQJI010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14726
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432998"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2531)
                     /locus_tag="VEV83_12290"
     CDS             complement(<1..2531)
                     /locus_tag="VEV83_12290"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK45945.1"
                     /translation="MSNFYKKLVPFLSAAVAFVPFVSAQTFTTKTDKPFDVSQFDNVQ
                     ATNSPLFNNSWYGFATGIYGSGQSPSQVKSADLDNDGDSDIIVSQENFSNGFVVLKNQ
                     GNFLFSAPVKYKSTKASKDIVVADLNNDGKKDVALTNSGFYFDGNTISVYFNQGSGNF
                     GNATNYTVSTDPIGIAAADFDNDGDADLAVANNRASGGTISILVNKGDGTFKTAVNFP
                     AGQTPYKITVAKINNDNLIDIVVANEGEKMNILFNGGSNNFSNRVETVVQSEAWGGDL
                     NANVEAADIDNDGDNDILYSSSLTWDGNNTGQIALFRNTGNGTFSPTQLINLGIFSGG
                     AVDMDVADLNGDGWKDIVGANFSGRIGDGYQVVLNNGSGNFLPAVVKPAGQSTYTLTT
                     ADVNNDHKIDVITCDWYSLQVTVHKNNGNANFPIPPMFNSNNATAGALDAADIDGDGD
                     LDVVSSASSIAAVNVKVTVQKNNGNGTFTDGVSYSIRGGGVRAKFRDLNGDGKPDLLF
                     ATAIGSPPYDFHTAINNGDGTFGARQTWSMNACGWNDIETADLDNDGDLDVVVTEWLG
                     CQNISNSARRIFISKNNGHGVFSAPLIKIVNPFPGSIATGDFNEDGKIDLVTGQSPGI
                     DLHRGTGTGDLLPPVSFATQKAPYTIIATDLNNDGHLDIAACTEYNSEGMSVLLGSGN
                     GTFQPAQNYDGAYSPDLRNESGIATGDVDADGDIDIIVGNAASNDVSIYLNKGDGHFI
                     FRERAGMYWGVASPVYADFTGDGKNDIIAIVGTPPSGIASQLALIKGTVQSTSAIANN
                     RTENNPVLNTQSGSEMMVMNNPFSNYIDIKFDKIQTGKITLQLSDL"
     gene            3136..3543
                     /locus_tag="VEV83_12295"
     CDS             3136..3543
                     /locus_tag="VEV83_12295"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HYK45946.1"
                     /translation="MKSIADVIRTDTHLNTLSRGILAADMTEELSGAGPFTIFAPSDP
                     AFRKLAPGLFPALLKPENKLQLTDLLNHHVIHGKTRFKDLKDGQKLKTINGKELNVTV
                     KDNAVSINGANIQMKDMEGRNGVVHSLDTVIES"
     gene            3788..4894
                     /locus_tag="VEV83_12300"
     CDS             3788..4894
                     /locus_tag="VEV83_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYK45947.1"
                     /translation="MLRKYPFYFKSTVILFGITLFVYAIANLKEILIPIAFSLMLAIL
                     LNPLCNWFAKKKISHLLSIAFSLIIALLIIAGIAYFLSSQIGSLSSELPLLKQKLAAL
                     FAQLQTAMDQKLNIDIKKQDEWISSAGAGMQPFIGRTLGTVVGSLAFLFLLPVYTFLF
                     LFYKTLILNFFYEVFAERNSKEVGEILTATKKSIQSYVVGLLLEALIVAILNAIALLM
                     LGVKYAILLGVLGAIFNVLPYIGGIIAIALPLLIATITKDGFHTQLLIIIAYIIIQFI
                     DNHFLIPYIVSSKVKINALISIIMIFLAGAVWGVSGMFLSIPFTGVLKIIFDRIPELR
                     PWGKLLGDEIPTRHKGEIWSVRRKKKSLSEKIVS"
     gene            5055..5465
                     /locus_tag="VEV83_12305"
     CDS             5055..5465
                     /locus_tag="VEV83_12305"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK45948.1"
                     /translation="MKKDKRNVTQFIDNGDRADNTNKTISQELEKSKVHIIVEIIEYV
                     PNAVVSKTIIKKTTGNVTVSSFDAGEELAEKTSPFDNYVQIIDGTAEVVIEEKNYKLQ
                     LGEGIIIPAHSPHRFNANEQFKMISTVIKSGYED"
     gene            5482..5892
                     /locus_tag="VEV83_12310"
     CDS             5482..5892
                     /locus_tag="VEV83_12310"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45949.1"
                     /translation="MKLKSVLLVDDDIDDQQFFIEALGAIENTNLYGVANNGKEALSM
                     LKNSISPPDHIFMDYNMPVMNGIECLTEIGKGQHTRHIPVVILSGSIEQADRARELGA
                     GFIKKSADIQQLRTELLTVFYAISGQPDPQRNLP"
     gene            5977..6198
                     /locus_tag="VEV83_12315"
     CDS             5977..6198
                     /locus_tag="VEV83_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45950.1"
                     /translation="MKVSVYIIIEMYKGEKTPLLRIDSAAYWDKNLAKEYVEEQNAHL
                     KELHIESSQFSIKEVQILDFPFVDRIKKV"
     gene            complement(6540..6950)
                     /locus_tag="VEV83_12320"
     CDS             complement(6540..6950)
                     /locus_tag="VEV83_12320"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HYK45951.1"
                     /translation="MSNITQVVNAEKHMTTLKKGVRASGLNEILSSTGPFTLFAPSDV
                     AFEKMDKTVLEDLLKPENKTKLADLLNYHVVPGKINYKDLKDGERLKTVNGEELLVHV
                     KDGEVSIEGAVIQNRDVKTSNGVIHSLDTVMMKN"
     gene            7452..8267
                     /locus_tag="VEV83_12325"
     CDS             7452..8267
                     /locus_tag="VEV83_12325"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HYK45952.1"
                     /translation="MLLIAGASICLTPPKSSAQQVGVSVSLQVFYDQLSPYGHWMHYS
                     GYNGYVWVPMVEAGFSPYSTRGHWRLTNAGWMWISDYSWGWAPFHYGRWDRDSRYGWI
                     WIPDTHWGPAWVNWRSSNGYYGWSPMEPLWNAHHRDYNNRSDRFIFVSYKDFDRPDVN
                     KYYIDKTKNVTIIKTSTVINNKHVDNSTHITYNAGPRREDVQKATGKEIREAAVEDND
                     KPGQNEQNDKVQIYKPRVKETDDNGKKPVPPKVSDKRTVEKDVKKNKSTPVNK"
     gene            8552..8752
                     /locus_tag="VEV83_12330"
     CDS             8552..8752
                     /locus_tag="VEV83_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004094893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HYK45953.1"
                     /translation="MMKEKGTVKFFNTSKGFGFITGNNGKDYFIHFSNLNGVNLVEGA
                     KVEFETRQGQKGLEAFNVSLVQ"
     gene            9189..12155
                     /locus_tag="VEV83_12335"
     CDS             9189..12155
                     /locus_tag="VEV83_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HYK45954.1"
                     /translation="MSNENSALQLKLQQLAKELEGELHDDDTMRILYATDASAYREMP
                     VAVALPKSIADIKRLIEFAHSERSSLIPRTAGTSLAGQVVGNGIIVDVSKYFTNILEL
                     NKDERWVRVQPGVIRDELNMFLKPHGLFFGPETSTANRAMMGGMVGNNSCGSNSIVYR
                     STREHLLAVKAILSDGTETEFSSLSPDDFHAKCEGETLEARIYNTVRRLLSNYDNQVE
                     IKKQFPKKTVERRNTGYAIDALLETAPFTAAGPDFNFCKLIAGSEGTLAFITEIKLNV
                     VPLPTEETGLLCIHFNSIDDALRANIIGLKYSPRASELIDHYILECTKDNIEQRKNRF
                     FVQGDPSAILVIELTGSDRAEIADTARHIEAEMRAAGLGYYFPLLFGDDTKKIWTLRK
                     AGLGLLGNLPGDDKAVPVIEDTAVDVLDLPSYIRDFNEILKTHNLYSVHYAHAGSGEL
                     HLRPIINLKTEEGNRLFRTIAEEIAVLVKKYNGSLSGEHGDGRLRGEFIRQMVGEKNY
                     QLLREIKSSWDPENIFNPNKIVDTPSMNSMLRYKPGQQTPPFKTVFRFYKQDILQHAE
                     QCNGSGDCRKTELSGGTMCPSFMATRNEKDTTRARANILREFLTNSTKMNRFDHEEVL
                     DVMDLCLSCKGCKSECPSNVDMAKLKAEFLQQYYDANGVPFRSKLIANFTRSAKLGAA
                     FPGIYNFMMTAPVVGDAIKKFSGFATKRSMPKIYKTTLKKWHQQHLRQNSRTSNIKHQ
                     TSNVKPQTLYLFCDEFSNYNDTEIGIKAILLLERLGYEVIIPEHEESGRTWLSKGLLR
                     EAKKIANKNIASLAALVNSEAPLIGIEPSAILTFRDEYIDLADDAQFETAKSLAANVF
                     MLDEFIGREIDKGNITKEQFTKEKKHIKLHGHCQQKALSSVAPSVKMLSLPENYAVDV
                     IPSGCCGMAGSFGYEKEHYDLSMQIGELVLFPAVRNQAEDVIIAAPGTSCRHQVKDGT
                     GRTALHPAEILFDALV"
     gene            12532..13515
                     /locus_tag="VEV83_12340"
     CDS             12532..13515
                     /locus_tag="VEV83_12340"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45955.1"
                     /translation="MARWGILGCGRIARKFASDLKLVENSELVACGARSAQSADEFEA
                     LFPVKYKHYSYEALASNPEVDVIYVATPHSHHHEHALLCIEHNKPVLCEKAFAINARQ
                     AKEMIDAARSKKVFLMEAMWTKFLAPYNKVKQMISEGMLGEIKSMQLNFGFRPPEPVS
                     QRIYDPALGGGTLLDIGIYNVFTALFFLGRPDAIEASMTAASTGVDAQCAVTFSYNNG
                     AVAQMLSTFLSDTATEAEICGTRGRVRLTTRYYTPFTIIEYYPSRPDTKEIIALDKEE
                     GYGYQYEARHVCECLEKGLTESPIMSHADTLLLMEMLDAIRQKAGIVYPVD"
     gene            13549..14037
                     /locus_tag="VEV83_12345"
     CDS             13549..14037
                     /locus_tag="VEV83_12345"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK45956.1"
                     /translation="MTFRNRKKLTVTLSLAACVILSIAASKPSPVKYHDGFKNLQVLP
                     KDISKDSLDKIMDGFKVALGVHCDFCHVRNEEKKQFDFAADDKVEKNIARHMMKMTTD
                     INANYFNFINSAKPDTISVVKCATCHRGDPHPDKFEMPQEEHHDMPPPPGQEQGKPDN
                     KQ"
     gene            complement(14540..>14726)
                     /locus_tag="VEV83_12350"
     CDS             complement(14540..>14726)
                     /locus_tag="VEV83_12350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK45957.1"
                     /translation="ADNGPGIEDDVLDKIFIPFFSTKKNGSGIGLSLCKQIMMLHKGN
                     IQVQSVKNEGTAFILQF"
BASE COUNT         4430 a         3011 c         3064 g         4221 t
ORIGIN      
        1 agatcactaa gctgcagcgt aattttacct gtttgtattt tatcaaactt aatatcaatg
       61 taattgctga aaggattatt cattaccatc atttcgctac cggactgtgt attgagaact
      121 ggattatttt ctgtgcggtt atttgcaata gcggaggtac tttgcacggt accttttatt
      181 aatgcaagct ggcttgctat gccactaggc ggtgtgccta cgatagcaat aatatcattt
      241 ttgccatcac ccgtaaaatc agcatacacg ggtgaagcta ctccccaata catgcccgct
      301 ctttctctaa aaataaagtg gccatcccct ttgtttaaat aaatagaaac atcattcgag
      361 gcagcattgc ccactattat atcaatatcg ccatcggcat ccacatcacc ggttgcaata
      421 cccgattcat ttctaagatc gggtgagtat gcaccatcat agttctgcgc cggctgaaag
      481 gttccgtttc cacttccaag cagcacactc atgccttctg aattatattc tgtgcaggca
      541 gcaatatcaa ggtgcccgtc attattaaga tcagtcgcaa taatagtata cggagccttt
      601 tgtgttgcaa atgatacggg tggcaataaa tcgccggttc ccgttccgcg gtgaagatct
      661 ataccgggtg attggcccgt aaccaggtca attttgccat cttcattaaa gtctcctgtt
      721 gctatagaac cgggaaacgg gtttacaatt ttaataagcg gtgcactgaa aaccccgtgc
      781 ccattatttt tactgataaa aattcttcgg gctgaattcg atatattctg gcaacctaac
      841 cattctgtta caactacatc taaatcgcca tcattgtcga ggtctgctgt ctctatgtcg
      901 ttccagccgc atgcattcat gctccaggtt tgacgcgccc caaaagttcc atcaccatta
      961 ttaatagccg tatgaaagtc atagggcgga gagccaatag cggttgcaaa aagcaagtca
     1021 ggttttccat caccatttaa atcccgaaac tttgcccgta caccgccgcc cctgattgaa
     1081 tatgaaacgc cgtcagtgaa agttccgttg ccattatttt tttgaacagt tactttaacg
     1141 tttacagcag caatactgga agccgatgac acaacatcca aatctccatc gccgtcaata
     1201 tctgcggcat cgagcgcccc cgcagttgca ttgttgctat taaacatagg gggtatagga
     1261 aagttggcat tgccattatt tttgtgtaca gtcacctgta gcgaatacca gtcgcaggtg
     1321 attacatcaa ttttatgatc attatttacg tctgctgttg tgagcgtata agtgctttgt
     1381 cctgcaggtt tgacaactgc aggcagaaaa tttccactcc cattatttaa aactacctgg
     1441 tagccgtcgc caattcttcc cgagaaattt gcaccaacaa tatccttcca tccatcgccg
     1501 ttcaggtctg ccacatccat atctacggcc ccgccgctaa atattcccag attaattaat
     1561 tgcgtggggg aaaatgttcc gtttcccgtg tttctaaaaa gagcaatttg cccggtatta
     1621 ttgccatccc aggtaagtga gcttgaatac aaaatatcat tgtcaccatc attgtcaata
     1681 tcagccgctt caacatttgc attcaggtcg cctccccatg cttctgactg caccaccgtt
     1741 tcaaccctgt tggaaaagtt attgctgccc ccgttgaaaa gaatattcat tttctcccct
     1801 tcatttgcta cgactatatc tattaggtta tcattattga tctttgcaac ggtgatttta
     1861 taaggcgttt gccctgcggg aaaattaacg gctgtcttaa atgttccatc ccctttattt
     1921 actaagatag aaatcgtgcc ccccgacgcc cggttgtttg ccactgcaag atctgcatcg
     1981 ccgtcgttat caaaatcagc ggcagcgatt cctatgggat cagtgctcac agtataattg
     2041 gttgcatttc caaaattgcc gctgccctgg ttgaaataaa cggaaatagt gttgccgtcg
     2101 aaatagaagc ctgaattagt aagcgcgaca tcttttttac catcgttatt taaatctgca
     2161 accacaatgt ctttggaagc ctttgttgac ttgtacttaa caggtgcaga aaataaaaaa
     2221 ttgccctggt ttttcaatac cacgaaacca tttgaaaaat tttcttgcga tacaattata
     2281 tcagaatccc catcgttgtc gagatccgca gattttacct gtgacggact ttgtccactg
     2341 ccataaatcc cggttgcaaa gccataccat gaattgttga acaaagggga attagtggcc
     2401 tgcacattat caaactgtga aacgtcgaag ggtttgtctg tttttgttgt aaaagtttgt
     2461 gccgatacaa acggtacaaa ggcgacggcc gccgaaagaa acgggacaag ttttttgtaa
     2521 aagttagaca tgataaatgt ttttgtttgt ttgatttttg gttcacagta aaagcacgcg
     2581 atctcttaac cccgaatgtg catggtctgt gcctctgtat aattttcctc gtggagggaa
     2641 ccaattgcgt aaaatgaaaa attctcaaaa tttgttgtta cgagtcgctc gccgtttgca
     2701 aataaacctg ttgtagacca acctccggaa cctactgttt ggtacagttg gctgtagttc
     2761 aggcaagaga ataaacaaat tattggaaca agaattaaaa atgatttgca ctgccggcga
     2821 agcttaaacg gatatgtagt tagtgtaaag gtctttttca tagttaccct ttgtgataaa
     2881 atgatatttt tcaagatcct gaaatgaata aattttttca tatgcttttc ggaacatata
     2941 aaggtgagaa ccttccgccg gttaagtatt acacaacttt cgaaataagt tgcatgattc
     3001 acatattgaa aagcgcctgc ataagaatta acaagccgaa tcagccttgg tattagagaa
     3061 agtcttctga tgcggatatt aaagattaca ttacacatgt gcggattttt ttctcccgcg
     3121 cataaataaa tcaaaatgaa aagtatcgca gacgtgatta gaacagacac acacctcaat
     3181 acactcagca ggggtatact tgcagcagat atgacagaag aactgagcgg tgcagggcca
     3241 tttacaattt ttgcaccttc tgatccggct tttagaaaac tggctccggg tttatttcca
     3301 gccttactca aacctgaaaa taaacttcaa ttgacggatt tgctaaatca tcatgtgata
     3361 cacggcaaaa caagatttaa ggacctgaaa gatggacaga aactgaaaac tataaatggg
     3421 aaagaactga atgtaacggt aaaagacaac gcagtaagca ttaacggtgc taacatccag
     3481 atgaaagata tggaagggag aaatggagtt gtacactcac tggatacggt tatcgaatca
     3541 taaccggagc tccggtgtat attattaaaa ttgaggatgc taagatttat tgaaatactt
     3601 aagtattaat gatgtgatgt acagaaagct atgccaggcg ccaattctat atgaagcatg
     3661 gttgtattaa tgcaacagcg cttttttgtt tggggcgaac ccgaaaggat gattaaggat
     3721 acttagcaat tggaaatttt tgagcttatc ctgattgatt gaaaaattga aaaacacagt
     3781 ctttgctatg ctgagaaaat acccctttta ttttaagagc actgtgatat tattcggaat
     3841 tactcttttt gtttatgcaa ttgctaatct taaagagatc cttataccga tcgcgttctc
     3901 tttaatgctt gccattttat taaatccatt atgcaattgg tttgcaaaga aaaaaatatc
     3961 gcacctgtta tcaattgcat tctccttaat aattgccctc cttatcatag ccgggatagc
     4021 ctattttcta tcgtctcaaa tcggcagtct gtccagtgaa ctgccgctgc tgaagcaaaa
     4081 attggcggca ctttttgcgc aattacaaac tgctatggac caaaaactga atatagatat
     4141 taagaagcag gacgagtgga taagcagcgc cggcgccggc atgcagccgt tcataggccg
     4201 aacactgggt acggtagtgg gctccctggc ttttttattt ttattaccag tgtacacctt
     4261 cctttttctt ttctataaaa ccttaattct aaattttttt tacgaagtat ttgcggaaag
     4321 aaattcaaag gaagtcggcg agatattgac ggcgaccaaa aaatcgatac aaagctatgt
     4381 ggtgggtctg ttgctggaag ctttgattgt ggccatcctg aatgcgattg ccttattgat
     4441 gctgggtgta aaatatgcga ttctactcgg agttctggga gccatcttta atgtgctgcc
     4501 atatatcgga ggcataatag caatcgcgtt accacttctt attgcaacga taacgaaaga
     4561 tggatttcac acccagttgt tgatcatcat cgcttatatt attatacagt ttatagataa
     4621 ccattttctt attccctata tcgtttcctc caaagtaaag atcaatgccc tgatttccat
     4681 aatcatgatc ttcctcgccg gagcggtctg gggcgtatca ggcatgtttt tatctattcc
     4741 ctttacaggt gtattaaaaa ttatcttcga caggatacct gaactaagac cgtggggtaa
     4801 attgttggga gatgaaatac cgacccgcca taaaggcgaa atatggagtg tgcgacgaaa
     4861 gaaaaaatct ttatcagaaa agattgtttc ataatttttc atacgcgcgt tcgcagaaag
     4921 cctctctata taattcacaa aaaacccgct ttacgtgaga gcatgttttc gcgcgaaaca
     4981 ttgtatgaat gatgtaactc ttttctgaaa ttgtgtaaca cttactgttt taaacatgtg
     5041 gacctttacg tgtgatgaaa aaagataaaa gaaacgttac tcaatttatt gataatggtg
     5101 atcgcgcaga taataccaat aagaccattt cacaggaatt agaaaaatca aaagtgcaca
     5161 ttatcgttga gatcattgaa tatgtaccca atgcagttgt aagcaaaacc attattaaaa
     5221 aaaccacagg gaatgttact gtttcctcat ttgacgccgg cgaagaattg gctgaaaaga
     5281 cttctccttt cgacaactat gtacaaataa ttgacggaac tgcagaagtc gttatcgaag
     5341 aaaagaatta caagcttcaa ttaggcgaag gaattattat ccctgcccac tcacctcatc
     5401 gtttcaatgc taatgaacaa tttaaaatga tctccacagt gatcaaaagc ggctacgaag
     5461 attaaaataa aaaaaccaaa cttgaaacta aaaagtgtct tattggtcga tgatgacatc
     5521 gacgaccagc aatttttcat tgaagcgctg ggcgctatag aaaatacaaa tttatatggc
     5581 gtagccaata atgggaaaga agcactttcc atgctcaaga attctatttc accgcctgac
     5641 catattttta tggactataa tatgccggta atgaacggaa ttgaatgctt aactgaaata
     5701 ggaaaaggcc agcacaccag acatatacct gtagtgattc tttcaggcag cattgaacaa
     5761 gcagaccgtg ccagggaact gggcgcagga ttcattaaaa aatcggctga tatacagcag
     5821 ttgcgaacag aattacttac agtattctat gcaatctcag gtcagcctga tcctcagaga
     5881 aatcttccat aaatgttaga agcctcatga gtatgcatcg cttttaggag gtgcatttgt
     5941 tttttactga ttaaccgcat aatagaattt acttaaatga aagtttctgt ttacatcatt
     6001 atcgaaatgt acaagggaga aaaaacgcct ttgttgcgaa ttgattctgc tgcctattgg
     6061 gataaaaacc ttgcaaagga atatgtcgag gagcaaaatg cgcatctaaa agaactgcat
     6121 atcgagagca gtcaattttc tattaaagag gtgcaaattt tagattttcc ttttgttgac
     6181 cggataaaga aagtataatg taaaatacaa tagtgctcga cattctatct gtgaattatg
     6241 taacttattt gcttaattgt ataacatctg aaccgcagta actgtgcaaa tttgtggcct
     6301 gctaaaaaag caagataata tttcaggggg caaaactgaa tgttagggta accaggctat
     6361 tcttagcctg gttttttgtt ttaaggctat cggcgaggtt ccgtgtctta cagtaaatta
     6421 aatatatatg ggcaactgag ctggaaaaag aatcacttaa cggtaaccgg aaagttgatt
     6481 ttccgcataa aaaaaccaca ggcgttaatg cctgcggttt ggaattagga atcaaacaat
     6541 taatttttca tcatcacggt atcaagggaa tggatcaccc cgtttgaggt tttcacatcc
     6601 cgattttgaa tgacggctcc ctcaatactt acttcaccgt cttttacatg taccaacaac
     6661 tcttctccat tgactgtttt gagtctttct ccatctttca aatctttgta gttgatttta
     6721 ccgggaacca cgtggtaatt caacagatcg gctagcttag ttttattttc cggtttcaac
     6781 agatcttcca aaacagtttt atccattttt tcgaaagcga catcggaagg tgcgaataag
     6841 gtgaatggcc ctgtgctgct taaaatttca tttaatccgg aagccctaac gcctttcttt
     6901 aatgttgtca tgtgtttttc agcattaaca acctgtgtga tatttgacat tttttaaatt
     6961 tagttgacgg taaaataacc gcaatgtatg taaggtaggc ctaaatgctt catatctgct
     7021 gttaatgtat ccccttccgt gttaatgttt agcttctcaa aatcttttat caccgcatca
     7081 ttactgaatg tatgaatcat gtaacataat gcaccaattg tgtaatgatt aactgatcaa
     7141 catcaatcat ctttacctgg tagcggtcaa actgctacaa ataataaaaa atgaaaatta
     7201 aaaaaacaat cagtctttta atgatcgttg ctataacggt catttctttc tcttcctgta
     7261 ctgtcgaata tcgtgcacgt catcatcggc attattatca tgattataat tatgcgcctg
     7321 cagttaatga taaacaacaa acagttgcag ttcagccaat atcctcttca aaaatttcag
     7381 tcacgcatta acaaacaaac attttctttc aaataaaatt aattatgaaa cattttctga
     7441 aaatttttag catgcttctc attgcagggg catctatttg cctgacaccg ccaaaatcat
     7501 ctgcacagca ggtgggcgtt agtgttagtt tacaggtttt ttacgatcag ttaagtccct
     7561 atggtcattg gatgcattac tcgggatata atggatacgt ttgggtacca atggtggaag
     7621 ctgggtttag cccttattcc acgcggggcc attggcggtt aaccaacgct ggctggatgt
     7681 ggatctctga ttattcatgg ggatgggcgc ctttccatta tggccgttgg gatcgcgatt
     7741 caagatatgg atggatctgg atacctgata cgcattgggg accagcatgg gtaaactgga
     7801 ggagttctaa tggttattat ggatggtcgc cgatggaacc tctatggaat gcgcatcata
     7861 gagattataa caaccgaagc gacagattca tttttgtaag ttataaggat tttgaccggc
     7921 ctgacgtaaa caagtattat attgataaaa caaagaatgt tacgatcatt aagacttcta
     7981 cagttataaa caataagcat gttgacaaca gtacccacat tacttataat gcgggccccc
     8041 gaagggaaga cgtgcaaaaa gcaacaggta aagaaatacg tgaagccgct gtggaggata
     8101 acgataaacc cggccaaaat gaacagaatg acaaggtgca gatatacaaa ccgcgggtaa
     8161 aagaaaccga cgacaacggt aagaaacctg tgccgccgaa agtatctgat aagaggaccg
     8221 tggaaaaaga tgtgaaaaag aataaatcaa ccccggtaaa caagtaaata aacgaaggta
     8281 atttatatca cacggtatat ttcctatgtt aactcagcac ggcttaaagc tgtgctgatt
     8341 ttttttgcac cacctggaat ttgatgcctt tgcacagttc tatgcagtgg cagcatttta
     8401 ttccctgcaa ttttgaaaat agtaatgcta ccaactcttc tcacaggaac ttcttttaac
     8461 cggaaaagga gcgaatattg tgcgggcaga gaagattaac acgaggaaat tctttacact
     8521 cattaaataa gaataccttt aaaataaaat tatcatgaaa gagaaaggaa ccgtcaaatt
     8581 ttttaataca tcaaaaggct ttggttttat tacgggcaat aacggaaaag attactttat
     8641 acatttttcc aatttaaacg gtgtcaacct tgtcgaagga gcgaaagttg aatttgaaac
     8701 caggcaagga caaaaaggtt tagaagcttt taatgtttcc ctcgttcaat aagttattga
     8761 tcagggagaa gactgccata taaaagcagc actccgcata gcaggccgcc tcttattttc
     8821 acaacacgaa tacgcgccgg taaagcattt gtgattttat tcgggaggcg cattttaacg
     8881 gcacgtccgt attgttctat tggcattgaa ggttgtccat gtgtgaatca tgtgcctttc
     8941 aaatagcagt ataccgtttt gttttattaa aagtttttca acttcctttc cttagaatat
     9001 aaccgatgga cgcacttcgt aacattattc caaatacatt gccttcaagc cttggaattt
     9061 tcgtactccg attgtttctc catactcatc ctttctaaat tagttacaat tctgaaattg
     9121 tctaattcga agtaaaagcc cgcacctcgt taaccagtac gataaacatt ctatttttgc
     9181 ggccggttat gagcaatgaa aactctgcac ttcaactgaa attacagcag ttggcgaaag
     9241 aacttgaggg tgaactacac gacgacgaca cgatgcgcat tttgtatgcg actgacgcat
     9301 ccgcttatcg cgaaatgccg gtggccgtag ctctgccaaa atcaatagct gacattaaac
     9361 gcctcatcga gtttgcgcat tctgaaagat cttcactaat accacgaacg gcagggacgt
     9421 cgcttgccgg ccaggtggtt ggcaacggca tcatcgttga cgtttccaaa tattttacca
     9481 atatcctcga gctgaataaa gatgaacgct gggtgcgggt gcagccgggt gttattcgcg
     9541 acgagctgaa tatgttctta aaaccgcacg gtttattttt tgggccagag acttcaactg
     9601 ctaaccgcgc aatgatgggt ggtatggtgg gcaataactc gtgcggatca aattcaattg
     9661 tatatcgcag cacccgagaa cacttgcttg cggtgaaagc gatcttaagc gacggaacag
     9721 aaacagagtt cagcagtttg agtcccgatg attttcatgc taagtgcgaa ggcgaaacac
     9781 tcgaggcaag aatttacaat actgttcgcc ggttattaag caattatgat aaccaggttg
     9841 agatcaaaaa acaatttcca aagaagactg tcgagcgacg aaataccggc tatgctattg
     9901 acgccttgtt ggagactgct ccttttacag cagccgggcc tgattttaat ttttgtaaac
     9961 tcatcgcagg ttcggaaggc acgctggcat tcattacgga gatcaaactc aatgtcgtgc
    10021 cattgccaac cgaagaaacc ggtttattgt gtattcattt taatagcatt gatgatgcgc
    10081 tgcgtgcgaa tatcatcggt ttgaaatatt ctcctcgtgc aagtgaactg atcgaccact
    10141 acattctcga gtgtacgaaa gataatatcg aacaacgcaa aaaccgtttt tttgtacagg
    10201 gcgatccttc ggcaatcctt gtgatcgaac ttacaggcag cgaccgtgct gaaattgctg
    10261 acactgcgcg ccacattgaa gcggaaatgc gcgccgctgg ccttgggtat tatttccctt
    10321 tattgtttgg cgatgacacg aagaagatct ggacactgcg aaaagcaggc ctcggattat
    10381 tgggcaattt gccgggcgat gataaagcgg ttccagtaat tgaagacacg gcagttgacg
    10441 tgcttgatct gccatcatac atccgtgact tcaatgagat acttaagacg cacaatttat
    10501 attctgtgca ctatgcgcac gccggctcag gggaattaca tctgcgtccc atcatcaact
    10561 taaaaaccga agaaggcaac cgtttgttca gaacgatcgc cgaagagatc gctgtgcttg
    10621 taaaaaaata taacggctct ctgagcggcg agcacggtga tggcaggttg cgcggagaat
    10681 ttatcaggca gatggtgggg gaaaaaaatt atcagctctt aagagaaata aagagtagtt
    10741 gggacccgga aaatattttc aatcctaaca agatcgtaga tacgccgtcg atgaattcta
    10801 tgttgcgata caagcccggt cagcaaacgc ctccgttcaa aactgtgttt cgcttttaca
    10861 agcaggacat cctccagcat gcggaacaat gtaatggttc cggcgactgc cgcaaaacgg
    10921 aattatcggg tggcaccatg tgcccttcat ttatggcaac acgaaacgaa aaagacacta
    10981 cgagagcgag ggctaacatt ctacgtgagt tcttgaccaa ttcaacaaaa atgaaccggt
    11041 ttgatcatga ggaggtcctc gatgtgatgg acctgtgcct tagctgtaaa ggttgcaaat
    11101 cggaatgtcc ttccaacgta gacatggcga aactgaaagc agaatttttg cagcaatact
    11161 acgatgcaaa cggtgttcct tttcggtcga agctcatcgc gaatttcacc aggtcggcga
    11221 aacttggagc cgcttttccg ggtatttata atttcatgat gactgcgcca gtcgttggcg
    11281 atgcaataaa aaagttttcc ggctttgcaa cgaaacgatc aatgccgaaa atatataaga
    11341 caacactgaa gaagtggcat cagcagcatc tccgtcaaaa cagccgaaca tcaaacatca
    11401 aacatcaaac ctcaaacgtc aaacctcaaa cactttatct gttttgtgat gagttctcaa
    11461 attataatga cactgaaata ggcattaaag caattttatt attggaaaga ttgggatatg
    11521 aagtgatcat tcccgagcat gaagaaagcg ggagaacatg gctttccaaa ggattgttgc
    11581 gtgaagcaaa aaagatcgca aacaaaaaca ttgcctcgct tgcagcgctg gtaaattcag
    11641 aagctccatt gatcgggatc gagccttcgg ccatactgac ttttcgggat gaatatatcg
    11701 atcttgctga cgacgcacaa tttgaaacgg cgaaatcttt agccgcaaat gtgtttatgc
    11761 ttgacgaatt catagggcgt gaaattgaca aaggcaacat caccaaggag cagtttacaa
    11821 aagaaaagaa acatattaaa ctgcatggcc attgtcagca gaaagcattg tcatcagttg
    11881 ctccttcagt aaaaatgttg tctttgccgg aaaattatgc cgttgatgtt attccctctg
    11941 gttgttgcgg tatggcggga tcttttggtt atgagaagga gcactatgat ctgtcgatgc
    12001 agataggaga gttggtgcta tttcccgcgg tcaggaacca ggctgaagac gttattattg
    12061 ctgccccggg caccagttgc cggcaccagg tgaaggatgg cacgggccgc acggcgttgc
    12121 atccggcgga aatattattt gatgcgttgg tgtaggaaga tcagtaatga ataatgagtg
    12181 atgagtgtat ttcgaaattt tcaataatca acaatcaatt ttcaatgttc attgcttcgg
    12241 aattacttga atattgacat attgcgtagt gattgttgaa tatttcaatc cgatcgcaaa
    12301 tgtaatccta tagcagatca gtaatgaata acgagtgctg agtgtcgttt cgaaattttc
    12361 aataattaat aatcaatttt caatgctcag ggaagttcct ctcctgaaag ctaaatcctg
    12421 aacgtaagtt catcaatctg cgatctaaaa tctgcaatct gaaatctgca atctgcaatc
    12481 ctaactcatt actcatcatt cattttcctt atttttccga aaacttttgt catggcacga
    12541 tggggaattt taggatgcgg ccgcattgcg cgcaaatttg catcagatct taagctcgtg
    12601 gaaaactcag agctggttgc ttgtggcgca cgcagtgcgc aatcggcaga tgagttcgaa
    12661 gctttattcc cggtcaaata caaacattac agttatgagg cgctggcttc aaatcctgaa
    12721 gtggatgtga tttatgtggc aactccacac agccatcatc atgagcatgc cttgctttgc
    12781 attgaacaca ataaaccggt actctgcgaa aaagcattcg cgataaacgc caggcaggcg
    12841 aaggaaatga tcgatgcagc ccgaagcaaa aaagtctttt taatggaggc aatgtggaca
    12901 aaatttcttg cgccttacaa caaggtgaag caaatgatat cagaaggaat gctcggtgaa
    12961 ataaaaagca tgcaactaaa ttttggcttt cgtcccccgg aaccggtgtc gcaaagaatt
    13021 tatgatccgg ctttgggcgg aggtactctg cttgacatcg gaatttataa tgtattcacc
    13081 gcactatttt ttttgggcag gcctgatgcg atagaagcca gcatgaccgc agcatcaacg
    13141 ggtgtcgatg cacaatgtgc tgttacattt tcttataaca acggagcggt tgcgcaaatg
    13201 ctttcaacat ttctctccga tacagctacc gaagcagaga tttgcggcac gcggggaagg
    13261 gttcggctca caacccggta ttatacgcca ttcacaatta tcgaatatta tcccagcagg
    13321 ccggacacta aagaaatcat cgcattggat aaagaagaag gatacgggta tcaatatgaa
    13381 gcgcggcatg tttgtgaatg cctggagaaa ggtttaacag aaagtcccat catgtctcac
    13441 gcagatacgt tactgttgat ggaaatgctt gacgcgatca ggcaaaaagc tgggatcgtt
    13501 tacccggtgg attaaaaaaa tttctatttt tccgtgcaaa taacacgtat gacatttaga
    13561 aacaggaaaa aattgacagt aaccctttct ttagccgcat gtgtgatctt aagtattgct
    13621 gcaagcaaac catcgcccgt aaaatatcat gacggtttca agaacctgca ggtcttacct
    13681 aaagacatta gtaaggacag tctcgacaag atcatggatg gtttcaaagt tgctctcggt
    13741 gtgcattgtg atttttgtca tgtgcgtaac gaggaaaaaa agcaattcga ttttgccgca
    13801 gatgataagg tcgaaaaaaa tattgcccgt catatgatga aaatgacgac cgacatcaac
    13861 gcaaactatt tcaacttcat aaattcagca aagcccgaca cgattagtgt agtgaaatgc
    13921 gcaacgtgtc atcgcggcga tccgcatcct gataagttcg aaatgccgca ggaagaacat
    13981 catgatatgc ctccaccgcc cgggcaagag cagggaaagc ccgataataa gcagtagttt
    14041 tttttctcac agatgccaca gaacttttta ataatattag tatctgtcaa aatccgtgtt
    14101 atctgtgaga ggcatcacac tccgtcgtgt tcttaaatta acattgaaaa ttgagaattg
    14161 agaattgaac atttgaatat tttgactgtc tggactactc aataaccaat attctatcgg
    14221 tcatgttcaa gtttgttttc tcacagatgc caccgatacg cacagaaaat tttaagcaat
    14281 aacaatcagt aaaaaatctg tgtcatctgt gagagccatg acactcggtg tgttcttcaa
    14341 tgattattga aaattgcgta ttgagtattg aatattttga ccgcgatgaa cactcaataa
    14401 gcaatattca ataactcaat gttcaacggt ttttttctca caggtaccgc agatgcgcac
    14461 acaaattcta aacaataaca atccgtgaaa atgtgtgtat atccgtgaga gccactcttg
    14521 tctcctcttg gggacggccc taaaactgca agataaacgc ggtgccctcg tttttcacac
    14581 tttggacctg gatattgcct ttatgcagca tcatgatctg tttacacagg cttagcccga
    14641 tgccgcttcc atttttcttt gtgctgaaga acgggataaa gatcttgtcg agcacatcat
    14701 cttcaatgcc cgggccattg tcggca
//
LOCUS       DASQJI010000435         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2661320,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000435 DASQJI010000000
VERSION     DASQJI010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2661320"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1206)
                     /locus_tag="VEV83_12355"
     CDS             complement(37..1206)
                     /locus_tag="VEV83_12355"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK45958.1"
                     /translation="MLILHDVHTIENGLKDVAIEDGTIRAIGSSAKSKANNETHIYFD
                     DALIFPGLINSHDHLDFNLFPRLGNGIYKNYLEWGDDIHSQNKTVINHVLQVPKKIRT
                     QWGIYKNLLNGITTVFNHGGPLEIQYSPIDVFQDKGSLHSVRLEKSWKWKLNDPFRIK
                     SRVVIHAGEGTDEESHEEINALIKWNKLHKKLIAIHGVAMDVRQAAAFQALVWCPDSN
                     LFLLGKTAAVNELKHVIPIVFGTDSTVSADWSIWNQLRIAKETGLLTNAELVASVTSS
                     PAKLRGLHAGVLAKGAIADLVVAEKKFDNATDAFFAVNPESILIVVKSGNIVLFDESL
                     QAQLGRQRTNTSDFCRIAVNDRFKYVKADVSGLLKKIRHFAKDISLPIESAEVSR"
     gene            complement(1233..>1638)
                     /locus_tag="VEV83_12360"
     CDS             complement(1233..>1638)
                     /locus_tag="VEV83_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45959.1"
                     /translation="LTSQLFKNERPWQNEQLASERLKRLKPEIIHIDYFAQNGNPEIN
                     KNVDPIGRSEYQGVSVNSTLYHNVRPFIAELMKGNEEQKKYARKLKRHYLLELTHDGG
                     RRPQKETPWMNFKIWLKGMKPRLGYAIFGKLN"
BASE COUNT          403 a          391 c          319 g          525 t
ORIGIN      
        1 gtaacttttt tccagtccat ggttttgcat gaatgttcat ctgcttacct ctgctgattc
       61 aattggcaat gaaatgtctt ttgcaaaatg gcggatcttt ttcagcaagc ccgacacatc
      121 agcttttaca tatttaaacc gatcattaac cgctattctg caaaagtctg atgtgtttgt
      181 tctttgacgc ccaagttgcg cctgcaagct ctcgtcaaac aaaacaatgt ttccgctttt
      241 taccactatc aagatcgatt ccggatttac cgcgaaaaaa gcatctgttg cattgtcgaa
      301 ttttttttca gcgaccacaa gatccgcgat cgcccctttt gctaatactc ctgcatgtaa
      361 accgcgaagt ttcgccggtg agcttgtcac cgacgcaaca agttccgcat tcgttaacaa
      421 gccagtttct tttgcaatgc gcaactggtt ccagatactc cagtcagcag agacagtaga
      481 atcagtgcca aaaacgattg gtattacatg cttcagttca ttaacagccg ctgtttttcc
      541 cagcagaaac aggttggagt ccgggcacca gaccagtgcc tggaacgctg ccgcctgccg
      601 tacgtccatg gccacgccgt gaatcgcgat caacttctta tgaagtttgt tccattttat
      661 taaggcattt atttcttcgt gactttcttc atcagtcccc tctcctgcat gaataacgac
      721 acggcttttt atgcgaaacg gatcattaag tttccatttc cagcttttct ccagtcgcac
      781 agaatgcaat gaacctttat cctggaagac gtcaataggt gaatactgaa tttccaatgg
      841 cccgccgtga ttgaaaactg tggtaattcc attgagcagg tttttatata tgccccattg
      901 cgtccggatt ttctttggaa cctgcaacac gtgattgatc acagttttat tttggctgtg
      961 aatgtcgtcg ccccattcta aataattttt gtaaatgccg ttaccgagcc gcgggaataa
     1021 attaaagtca agatgatcat gcgaattgat caagccggga aatatgaggg catcatcaaa
     1081 atagatatgc gtttcattgt tagccttact ttttgccgaa gagccaatag ctctgatcgt
     1141 tccatcttca atcgctacgt cttttaatcc gttctctatt gtatgaacat cgtgtagaat
     1201 tagcatccgt caggacataa gttttattaa cgtcagttga gttttccaaa aattgcatag
     1261 ccgagtcgtg gcttcattcc tttcagccag atcttaaaat tcatccacgg tgtttccttt
     1321 tggggccttc gccccccatc atgcgttaac tcaagcaagt aatgccgttt aagttttcgc
     1381 gcgtattttt tttgctcttc attgcctttc atcaactcgg caataaatgg ccttacattg
     1441 tgatacaggg tgctgttaac agacacgccc tggtactcac tccgcccgat gggatctaca
     1501 tttttgttta tctcgggatt tccattctga gcaaagtagt cgatatggat gatctccggt
     1561 tttaaccttt tcagcctttc tgatgcaagt tgttcattct gccacggacg ttcattctta
     1621 aaaagctggc ttgttaaa
//
LOCUS       DASQJI010000436         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_972067,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000436 DASQJI010000000
VERSION     DASQJI010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972067"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VEV83_12365"
     CDS             complement(<1..605)
                     /locus_tag="VEV83_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45960.1"
                     /translation="MHTKYYPPILTLVCLAFALTMFGQPGVPVNDSVNAVFSKFIKTS
                     NEKSIVLLTNRNLYAAGEKIWFKAYVVNSIDGTLDVATKNLFADIVDEKDSVIEQVVL
                     DNADFRTDGAFQIPELLPTGFYWIRCYSAEQLSNNKNSIFIRPVLIMNMRLHDESLYL
                     RKFQASIARNDKLRPMVQFFPERLTGIAGVISTGVIQIQNA"
     gene            complement(945..1643)
                     /locus_tag="VEV83_12370"
     CDS             complement(945..1643)
                     /locus_tag="VEV83_12370"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HYK45961.1"
                     /translation="MLTKAFPLNKAAKVAGLSCLLSTAIVAYTNFGIVSKLMVAGNPA
                     QTAQNILSHESLFRLSIVGHMFYCAGILIFVSALYLILKRVNEGLALVAALFRLVFAL
                     TWIFIVLNFFTALRLISNDYLKVIETERLQALAKLFLSGYDAYYVGLLFWSLASTLCG
                     WLWFRSKFVPAALGLFGFVSSAWCVFCTVVFLVYPDFDKIVNLWLFDSPMAVFEIVLS
                     FWLLFKGIRAAETQ"
     gene            complement(1673..>2012)
                     /locus_tag="VEV83_12375"
     CDS             complement(1673..>2012)
                     /locus_tag="VEV83_12375"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HYK45962.1"
                     /translation="QLDALSYLAIRLDAYGFGVGLIFFGFACLIIGHLIVQSGYLPKF
                     IGVMMQIAGACYLANSFALILAPTVANKLFPAILLPAFIAELSFCLWLLIKGVDVAKW
                     HEKAQAVTRR"
BASE COUNT          636 a          452 c          415 g          509 t
ORIGIN      
        1 ttagcgttct gtatttgaat gacgccggta gaaataactc cggcaattcc agttaaccgt
       61 tccggaaaaa attgaaccat cggccgcagc ttatcgttcc ttgcgatgct ggcctggaat
      121 tttcttaagt acaagctttc gtcatggagg cgcatgttca tgatcaaaac aggccgaatg
      181 aaaatgctgt tcttgttgtt gcttaattgt tcggccgaat aacatcgtat ccaataaaaa
      241 cctgtcggaa gtaattcggg aatttggaag gctccgtccg ttcgaaaatc tgcgttatcc
      301 aaaacaactt gttctattac gctgtctttt tcatcaacaa tatctgcgaa taaatttttt
      361 gtcgccacgt caagggttcc gtcaatgctg tttactacat acgctttgaa ccaaattttt
      421 tcacccgctg cataaagatt tctattcgtg agaagcacga tactcttttc attactagtt
      481 ttaataaatt ttgaaaagac agcatttacc gaatcattga ccggtacgcc tggctgaccg
      541 aacatcgtta atgcaaaagc aaggcaaacg agggttaaga tcggcggata gtatttggta
      601 tgcaaccagt atagaattaa tttacattaa aaaatccggg acaaagctaa caagtttcct
      661 ataacagaaa ttgaatggta tttgtgcgaa aggaaacggc gatcaacgcc ttgttactca
      721 aaacttttaa taagaagcct cccggcaaaa accggaggtt acgttggtac gaaaaaaacg
      781 tgcagctata acttttcaaa tcgcaaaacc ttatttccat ttgttaacag caggcggagg
      841 aaatgcgcct cgctttgatc ctgacacgtc aatttcaaat tgttgagttc cggaaagctc
      901 caggtccgat ggcttcagca cagagccatt aacatcaata cttattattg cgtttcggct
      961 gcgcgaattc ctttgaacaa caaccaaaag ctcagcacta tttcaaaaac tgccatcggt
     1021 gaatcaaaca accacaggtt gacgatcttg tcgaaatcag gatacacgag gaacaccacc
     1081 gtgcagaata cacaccacgc cgacgagacg aagccaaata atccgagcgc ggccggaaca
     1141 aattttgatc gaaaccataa ccaaccacac aacgttgatg ctaacgacca aaacaacaat
     1201 ccaacataat atgcatcgta acccgataaa aataatttag cgagggcctg gagccgttcg
     1261 gtttcaatca cctttagata atcgttgctg ataaggcgca gtgctgtaaa aaaattcagc
     1321 acaatgaaga tccaggttaa agcgaagacg agtctgaaga gcgctgcaac gagggcgagg
     1381 ccttcattca cccgttttag aattaaataa agcgctgaca cgaaaatcag aatgcccgca
     1441 caataaaaca tatggccaac gatgctaaga cggaagagcg actcatgact taaaatattt
     1501 tgagcagtct gcgcagggtt gccggcaacc atcaattttg aaacgatccc aaaatttgtg
     1561 tatgcgacaa ttgcagtcga cagcaaacaa gacagtccag cgacttttgc tgctttgttg
     1621 agtgggaaag ctttcgtaag catgatagtt agttttagat ttttttgggg cgtcatcggc
     1681 gagtaaccgc ttgcgctttc tcgtgccatt tagcaacgtc cacccctttt atcaaaagcc
     1741 ataaacaaaa tgacagctct gcaataaacg ccggcagcag gatcgccgga aataatttat
     1801 tggcaaccgt cggcgcaaga attaatgcaa aactgtttgc caaatagcat gcgccggcga
     1861 tttgcatcat cacgccaatg aattttggca gatagccgga ttgtacgatc aaatgtccaa
     1921 taataaggca ggcaaatcca aagaatatta gcccaactcc gaacccgtat gcatccagcc
     1981 ttatcgcaag gtatgataat gcatcaagct ga
//
LOCUS       DASQJI010000437         5102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1277867,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000437 DASQJI010000000
VERSION     DASQJI010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277867"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..178
                     /locus_tag="VEV83_12380"
     CDS             2..178
                     /locus_tag="VEV83_12380"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYK45963.1"
                     /translation="MNRYSPLVTKQEYSKSTMNTLIKGYFGGSYSKAVSFLVDEKKLS
                     VQDLELLIQQLKKK"
     gene            180..1892
                     /locus_tag="VEV83_12385"
     CDS             180..1892
                     /locus_tag="VEV83_12385"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HYK45964.1"
                     /translation="MLQNVLVYNFKVIVCAAVLLSYYVIALRNKRFHQYNRFYILSAV
                     LVSTILPLLHFEWFPLSSKSAQAIQLFKIIEGTGGEEVGAAGNGSFNWQRIAVYMFLS
                     VGSFLLLMLVFQLMRLLRLKNKFPVTRMHAFDLVITDLQQAPFSFFRNIFWREDISLN
                     EETGQQIFNHELIHVKQKHSWDKLGLEILLCFYWLNPFFWWLRKELNLVHEFIADEKA
                     VANNDTHSFSRMLLTTACHKFDFSPAHSFSCSPIKRRLIMLTTSRKTSFSYLRRIMFL
                     PLIGLIICLFAFTVRKQSADSSTQNVSNKHFVLVVDAGHGGKDLGAVGNDLSEKDVTL
                     KIAEEIKSLSSDYGVDVVLTRDKDAFMSPADKSTFANAQHADAFVSIHVNAALESQEE
                     RSGFEVVVSRNSAKAFSSRLFGSAIIQSLQTDFTIEPSLQQRTKGVWILDNSILPAAL
                     VECGYLTNKEDANLLKDNSNIASIARAILNGVALYANNKNSISQKDIIHASDTTPVQH
                     SSDSAMALPLYVLDGKIVTKKDVDKIDPSSVEQINVLKGKEAADKYGEKGKGGVVEIT
                     LKKN"
     gene            complement(1903..3141)
                     /locus_tag="VEV83_12390"
     CDS             complement(1903..3141)
                     /locus_tag="VEV83_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HYK45965.1"
                     /translation="MKCIKDLFKYFPDTEKGGLYSQRGVSAQKEDVHAAIKDLDKGLY
                     EFAFCKLYPDVIGNDDAFVNIMHADGAGTKSILAYLYWKETGDISVWKGIAQDAVVMN
                     LDDLLCVGIYDNILFSSTIDRNKSLVPGEVLQQIINGTQDFFNELKNFGIHIQYLGGE
                     TADVGDVVRTIAVNGTMMARWKRSRIITNEKINAGNVIVGFASYGQASYEHEYNSGIG
                     SNGLTSARHDVLSKRYATKYPETFEPTLNENVVYIGKHELTDDADVSKSEIHGPESTT
                     AIGKLLLSPTRTYAPLMKVLLENYFENIFGVIHCSGGGQTKCMKYLPRPLRIIKNNLL
                     EVPEIFKIIQQGSGSVEREMYQVFNMGHRLEIFTDEKTASAMIDEAAKFNIDAQIIGH
                     VEHSDKKELQLHVDGKIIAF"
     gene            3227..4207
                     /locus_tag="VEV83_12395"
     CDS             3227..4207
                     /locus_tag="VEV83_12395"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HYK45966.1"
                     /translation="MRLHRSTENLPAFKNAVVTIGTFDGVHVGHQQIIKQLKEEAAAI
                     NGETVIITFHPHPRTVVAAGKPVHLLTTLDEKISLLSRLNIDHLVVVPFDETFSNQRP
                     EEYVKNFLYDKFHPHTLIIGYDHRFGKNRSGDYHLLENYGTNLGFIVKEIPEQVINQV
                     TISSTRIREALLHTDLETANKYLGYPYFFEGMVVDGNKLGRTLGYPTANIVVRDDLKL
                     VPANGIYVAEAELVDGESPGTQGASLLATEHSRFKGMMSIGVRPTVDGKNRTIEMNIF
                     NFGQDIYGSTLKIYAHKYLRPEAKFNTLDELKQQIDKDKEASLAYFANRM"
     gene            complement(4583..>5102)
                     /locus_tag="VEV83_12400"
     CDS             complement(4583..>5102)
                     /locus_tag="VEV83_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HYK45967.1"
                     /translation="QRVPQTETQGRVHTSAATVAVMPEAEEVDFELNPADVKMETARS
                     GGAGGQNVNKVETKVMLTHIPTGTVVVCQTERSQLGNREKAMTMLRTRLYEEQVRKQE
                     EEIARHRKTLVSTGDRSAKIRTYNWPQGRVTDHRIGLTVYNLDAVMNGDLDQFIEALQ
                     VAENAEKMAKQN"
BASE COUNT         1413 a         1137 c         1111 g         1441 t
ORIGIN      
        1 catgaaccgc tattcgccgc tggtgacaaa acaggaatat tcaaaaagta caatgaatac
       61 cctgatcaaa gggtacttcg gaggttctta cagtaaagca gtttcatttt tggtggacga
      121 aaaaaaatta agtgtccagg atcttgaatt attaattcaa caacttaaaa agaaatagca
      181 tgctgcagaa tgttctcgtg tacaatttca aagtgatcgt ttgcgctgcc gtattgttgt
      241 catactatgt gatcgcgcta cgcaacaaaa gatttcatca gtacaacagg ttttatatat
      301 tgagcgccgt attggtcagc acaatattgc ccttgctgca cttcgaatgg tttccgctca
      361 gcagtaagtc tgcgcaggca atccagttat ttaaaataat agagggaact gggggtgaag
      421 aagtcggtgc ggcaggaaac ggttctttca actggcagcg catcgcggtg tatatgttcc
      481 tatcggtcgg ctccttccta ttgctaatgc tggtgttcca gcttatgagg ctcttaaggc
      541 tgaaaaacaa atttccggtc acacgcatgc atgcgtttga tctcgtgatc actgatctgc
      601 agcaggcgcc tttttcgttt ttcagaaata ttttctggcg tgaggatata agtttgaatg
      661 aagaaaccgg gcagcaaatt ttcaatcacg agctcataca tgtaaaacaa aaacattcgt
      721 gggacaagct gggccttgaa atattattat gtttttactg gctgaatccc tttttctggt
      781 ggcttagaaa agagcttaac ctagtgcacg aatttatagc agatgaaaag gccgttgcaa
      841 acaacgacac gcattctttt agcaggatgt tgctaacaac ggcatgccac aaatttgatt
      901 tctcccctgc gcattcattt tcttgttcac caattaaaag acgattaatc atgcttacta
      961 cctcgagaaa aacctcattt agctatctgc gtcgcattat gttcctgccc ctgatcggcc
     1021 taatcatttg cctttttgca ttcaccgtta gaaaacaatc tgctgattca tccacacaaa
     1081 atgtttcaaa caaacatttt gttctggttg ttgatgccgg gcatggagga aaggatctgg
     1141 gcgctgttgg aaatgacctt tctgaaaaag atgttacatt aaagattgca gaagaaataa
     1201 aatctctttc atctgattat ggggtcgatg tggttttaac gcgggacaag gatgcgttta
     1261 tgtcaccggc ggacaaatca acctttgcga atgcgcagca tgcagatgca tttgtttcaa
     1321 ttcatgtgaa tgcagcactg gaatcgcagg aagaacgatc gggcttcgaa gtggtggttt
     1381 cccgcaacag cgcgaaggcg ttttccagta gactgttcgg ttcggcaatt atacaaagct
     1441 tacaaaccga ctttacaatc gaaccttcac tgcagcagag aacgaaaggc gtatggatac
     1501 tggataacag catcctaccg gctgctctcg ttgaatgcgg gtacctgaca aataaggagg
     1561 atgcaaacct cctgaaggac aattctaaca tagcatcgat cgcgagagcg atcctgaacg
     1621 gagttgcatt gtatgcaaat aacaagaatt caatttcaca aaaagatatc attcatgcca
     1681 gcgatacgac gccggtgcaa catagttcgg attcagcgat ggcattgcca ttatacgttc
     1741 tcgatggaaa aatagttacg aaaaaagatg ttgataagat cgatccgtcc tctgtcgaac
     1801 aaataaatgt tttaaaagga aaggaagcag ccgataaata tggagagaaa ggaaagggtg
     1861 gagtagttga aattacgttg aagaaaaatt gatgccggca aatcaaaatg caatgatctt
     1921 tccatcaaca tgcagttgca attctttttt atcggaatgc tcaacatgac ctatgatctg
     1981 tgcatcaata ttaaatttcg cggcttcatc gatcattgct gaagccgttt tttcatcggt
     2041 gaatatctcc aatcggtgtc ccatgttgaa tacctggtac atttcgcgtt cgacagaacc
     2101 cgaaccttgc tgaatgatct taaatatttc aggtacctcc aacaaattat tctttattat
     2161 tcttagtggc cgcggcaaat atttcatgca ttttgtttgg ccacctccgc tgcaatggat
     2221 cactccaaaa atattttcaa aataattttc aagcagaact ttcatcagtg gcgcgtaagt
     2281 gcgtgtggga ctgagcagta atttaccgat cgcggttgtt gattccggac catgaatttc
     2341 ggattttgaa acgtcggcgt cgtcggtcaa ttcatgttta ccgatataaa caacattctc
     2401 atttaaggtc ggctcgaacg tttcaggata ttttgtcgca taacgcttgc tcaaaacgtc
     2461 atgcctcgca ctagtcaaac cattgcttcc aatgccactg ttatattcat gctcgtaaga
     2521 agcttgtcca tagctggcaa aaccaacgat aacattgccg gcattaattt tttcattggt
     2581 aataatgcgt gatcttttcc acctcgccat cattgttcca ttgacggcga tcgttcttac
     2641 cacatcgcca acatctgccg tttctccgcc cagatattga atgtgtatgc cgaaattttt
     2701 cagttcatta aaaaaatcct gtgtaccatt gattatttgc tgaagtactt cacccggaac
     2761 cagcgattta ttccggtcga tcgttgaaga aaaaagaatg ttgtcataaa taccgacgca
     2821 aagcaaatca tccaggttca ttacgaccgc atcttgcgca atgcctttcc acacagagat
     2881 atcccccgtt tctttccagt ataaataagc caggatactt ttcgttccgg cgccgtcggc
     2941 atgcataatg tttacaaacg cgtcatcgtt tccaatcaca tcaggataca atttgcaaaa
     3001 tgcaaattca tacaaacctt tatccaggtc ttttattgca gcatgcacat cttccttctg
     3061 cgcagacact ccgcgctgcg agtataagcc tcccttttcg gtatcgggaa agtatttaaa
     3121 gaggtctttt atacatttca tgtaaggcaa aaataagtgt tgatgagaag tacagacaac
     3181 aagtttacat tctgcccttt agaggatgcg ggcttatatt tgctctatgc ggctgcaccg
     3241 ttccaccgaa aatcttcctg cgtttaaaaa tgcggttgtc accatcggca ccttcgatgg
     3301 cgtgcatgtg gggcatcagc aaataataaa acaattaaaa gaagaggcag cagcaattaa
     3361 cggggaaacg gtgatcatca cttttcatcc gcatccgcgc actgtagttg ccgcaggtaa
     3421 accggttcac ctgttaacta cacttgatga gaagatcagc ctgctttccc gactcaacat
     3481 cgatcatctt gttgtagtgc cttttgatga aacgttttcg aatcaaaggc cggaagaata
     3541 cgtaaaaaat tttttgtacg acaaatttca tccgcacact ttaataatcg gttatgacca
     3601 ccgctttgga aaaaaccgca gcggcgatta tcacctcttg gagaattatg gaacaaacct
     3661 tggctttatc gtaaaagaaa ttccggaaca ggtgatcaac caggttacga tcagctcaac
     3721 acgcatacgg gaagcgttgc tgcacacaga cctcgaaaca gccaataaat acctgggcta
     3781 tccatatttt tttgagggga tggtggttga tggaaataaa ctcggccgca cgttgggtta
     3841 cccgacagcg aacattgttg ttagggatga cctgaagctg gttccggcga atggcatcta
     3901 tgtggccgaa gcggagctgg ttgatgggga atcgccaggc acgcagggcg catcattact
     3961 ggcaactgag cattcacgtt tcaaaggcat gatgagcatt ggggttcgtc caacggttga
     4021 tggaaaaaac cgaacgatcg aaatgaacat ttttaatttc gggcaagata tttatggaag
     4081 tactttaaag atctatgccc ataaatactt aaggcctgaa gcaaaattca acacactcga
     4141 tgaattgaaa cagcaaatcg ataaagacaa agaggcaagc cttgcatact tcgctaaccg
     4201 gatgtgaaag gcgaatgatg aatggtgatg gttgtgaatt gtgaatggtc aattgtcaat
     4261 taagcaaaaa aaactttctg tccttcccga ctttgtggaa ctcaacagac aagcctctcg
     4321 tatttcggat tgaatcatca aaaactttgt gccctttgcg tgtttgtggg aattcgttgt
     4381 gagccggatt cagtaggcaa cagacaagcc tctcgtattc gtgggaaggg gttgacccat
     4441 gaaaaacttt gggtccttcg caactttacc ggatctcatt gtgagcgcga ttcacagaca
     4501 agcctctcgt atttcgtggg gaagggattg aatcatcaaa aactttgtgg cctttgcgtc
     4561 tttgtgggaa ccctttgcga gctcaattct gtttagccat tttctccgca ttctccgcga
     4621 cctgcaaagc ttcgatgaac tggtcaagat ctccgttcat caccgcatcc aggttataaa
     4681 cagtcaaccc gatgcggtga tcagtaacgc ggccctgagg ccagttatac gtgcgaattt
     4741 ttgcactgcg gtctccagta ctgacgagcg ttttgcgatg cctcgcgatc tcttcttcct
     4801 gtttacgcac ctgctcctcg tataatcttg tccgcaacat cgtcattgct ttttcccggt
     4861 tgcccaactg actccgttcc gtttgacaaa cgacaacagt gcctgtggga atgtgtgtca
     4921 acatcacctt cgtttctact ttatttacgt tctggcctcc cgcgccgccg ctgcgtgccg
     4981 tttccatttt cacatcggcg gggtttaatt caaaatctac ctcttcggct tcgggcatta
     5041 cggcgacggt tgctgcagat gtatgaaccc gcccctgcgt ttctgtctgc ggcacgcgct
     5101 gc
//
LOCUS       DASQJI010000438         2892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_972346,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000438 DASQJI010000000
VERSION     DASQJI010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972346"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VEV83_12405"
     CDS             <1..304
                     /locus_tag="VEV83_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45968.1"
                     /translation="NNLYAFAGVSVAPTYVNFSGTFLNTDLSKVNTNNNVFRNSNTGV
                     YSSAALGLMYINDARTFSISGHISIERDNYPVYYYNPGNTTRPNNAPPAYKSQQRP"
     gene            1087..2823
                     /gene="sulP"
                     /locus_tag="VEV83_12410"
     CDS             1087..2823
                     /gene="sulP"
                     /locus_tag="VEV83_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate permease"
                     /protein_id="HYK45969.1"
                     /translation="MKIETPPTITSSVGGWQRWLPGLQTLKDYKLSWLTSDLTAGLVL
                     TTMLVPVGIAYAEASGVPGIYGLYATVVPLLAYAIFGPSRIMVLGPDSSLAPIILAIL
                     MPLSLGDPARAVALAGMMAIVSGIVCILAGVLRLGFITELLSKPIRYGYMNGIALTVL
                     ISQIPKMLGISIESSGPMRNLYSITQSVLDGKTNLASLIIGAATLAIIMLLKPYKRIP
                     GILLAVTGATLATGLLHLHENWGVKILGSLPQGLPSFIFPSVHLSDMQDVIIGGCTVA
                     LVAFADTSVLSRIYAAKTKTHVDPNQEMIGLGAANLATGFFQGFPISSSSSRTPVAEA
                     SGSKTQLTGVVGAVSVALLLLFGAGLLKNLPNSALAAVVISSAIGLFEIGDLRRIFRI
                     QQWEFWLSIVCFLGVAIFGAIPGIGLAIVIAVIEFLWDGWRPHYAVLGRVDGIRGYHD
                     IQRYPNARLIPGLVLFRWDAPLFFANAALFQEQVLKVVSNSATPVKRIIVTAEPVTSV
                     DITSADMLVELKKALDNSQIELHFAEMKDPVKDKLKRFELLQTLGTDIFYPTIGSAID
                     NYVATYNIEWRH"
BASE COUNT          730 a          661 c          646 g          855 t
ORIGIN      
        1 caacaatctt tacgcctttg caggtgtgtc tgttgcaccg acatatgtaa actttagcgg
       61 tacttttctc aatactgatc tcagtaaagt aaatactaat aataacgttt tcagaaactc
      121 caacacgggt gtctactcaa gtgccgcact cggactcatg tatataaatg atgcaagaac
      181 gttttctatt tccgggcaca ttagtattga aagagataat tatccggtgt attattacaa
      241 ccctggcaat acgacaaggc caaacaacgc accgcctgct tacaagtccc aacaacggcc
      301 gtgaacttgt tggtgtcgac caacggcggc tcattttttt cttggtgttc gtcgtgcttc
      361 ttagtgaact tcgcccgtat taaaaaattg tcggtagcga cgagacaaga agggatgtag
      421 gatttgggat ttgcgattca ggatttggga tttggggacg tgatcgcctt acgaaagaag
      481 tatttgcaat gcgatgttaa gccttggtgt ctcttcctgt cttcgagcct cagcggttca
      541 aaggacgaga aaccaaaaag accccaaggc acaatgttcc acacagtgtg atgaactttc
      601 atcgcactgt gtcatcttta aacgtctcgt ggcgacgcgg caacctcgaa cttaggctcc
      661 ttggcggact tagcgaaata tttgagtcct ttgcaatact ttctcaagtt tttaataacg
      721 caaaactcgc aaagtgtttc ccaaagaccc ccaaggcaca atgtttcaca aagtgtgatg
      781 aactttcacc gcactgtgtc atctttgaac gtctcgcggc gacggggcaa cctcgaactt
      841 aggctccttt gcggacttag ggaaatcttt gagtcctttg cgatactttc tcaagttttt
      901 agtaatgcaa agctcgcaaa gtgtttcgca aagactccca agcacaatgt ttcataaagt
      961 atgatgaact ttcaccgcgc tggtgtgctc tttaattctt aattggcaca acacataatg
     1021 tcaacccatt tgccacaact ttcttctgtt tacgctaatt cagattgcat caactaaatt
     1081 ggcgtcatga aaattgaaac gccgcctact attacatcct cagttggcgg atggcaacga
     1141 tggctgcccg gattacaaac tcttaaagat tataaattat cctggttaac cagcgatctg
     1201 accgctggcc tggtactcac caccatgtta gtacctgttg gtattgcata tgccgaagct
     1261 tctggtgtac ctggcatcta tggtctttac gccaccgtcg taccgctttt agcatatgcg
     1321 atatttggtc caagccgcat catggtattg ggccctgatt cttcattggc gccgatcatc
     1381 cttgctatat tgatgccttt gtcgcttggc gatcccgccc gtgcagttgc attggccggg
     1441 atgatggcaa tcgtatcggg tattgtatgt atcctcgccg gtgtgttgcg tttggggttc
     1501 attaccgaat tgctttccaa acccattcgg tatggctata tgaatggtat tgcacttaca
     1561 gtgctgatca gtcaaatccc gaagatgctg ggtatctcca ttgaaagcag cggccccatg
     1621 cgaaatcttt attccatcac tcaatcagtt ctggatggaa aaacaaattt ggcttcttta
     1681 ataattggcg ccgccaccct ggcgatcatc atgcttctta aaccctacaa acgcatccct
     1741 ggaattttat tggcagtcac tggcgcaact ttggcaacag gtctcttgca cctgcacgaa
     1801 aattggggcg tgaaaatttt gggatcactt ccgcaaggtt tgccttcatt catttttccc
     1861 tcggttcatt tatcagacat gcaggatgtg atcattggcg gatgcacagt tgccctggtg
     1921 gcttttgcag atacaagtgt tttgtcgcgc atttatgctg ctaaaacaaa aacgcatgtt
     1981 gatccaaacc aggaaatgat cggtttaggc gcggcaaatc tcgcgaccgg ttttttccag
     2041 ggatttccga tcagcagcag ttcttcacgc acaccggttg cagaggcctc aggctcgaag
     2101 acgcaactca caggagttgt aggcgctgtt tcggttgcat tgcttttgtt atttggagcc
     2161 gggttattaa aaaatttacc caatagtgct ttagcagcgg tcgtgatctc ttcggcgatc
     2221 gggctttttg aaattggtga cctgcgaaga atttttcgca ttcaacaatg ggaattctgg
     2281 ttatcgatcg tatgcttttt aggtgtggcc atctttggtg ctatccctgg tatcgggttg
     2341 gcaattgtaa ttgcagtaat cgaatttctg tgggatggct ggcgccctca ttatgccgtg
     2401 ttgggtcggg tggatggaat acgcggttat catgatatcc aacgatatcc taacgcccgc
     2461 ctgataccgg gattagtgct cttcagatgg gatgcgcctt tattcttcgc taatgcagca
     2521 cttttccagg agcaggtttt aaaagtggtt tctaattctg caactcctgt taaacgcatc
     2581 atcgtaacgg ccgagcctgt gaccagcgta gacataacct cagccgatat gcttgttgaa
     2641 ctgaaaaaag cattagacaa ctcccagatc gaattgcatt ttgcagaaat gaaagatccc
     2701 gtaaaagaca aactcaaacg tttcgaatta ttacaaaccc tgggaacaga cattttttat
     2761 ccaacgatcg ggtccgcgat agataattat gttgctacat acaacattga gtggaggcat
     2821 tgattgattt aaaacagatt tttaaaagcg ttgcacaagt atttgtacta actgccccat
     2881 gtattattaa ac
//
LOCUS       DASQJI010000439         7480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1124943,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000439 DASQJI010000000
VERSION     DASQJI010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7480
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124943"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="VEV83_12415"
     CDS             complement(<1..1136)
                     /locus_tag="VEV83_12415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45970.1"
                     /translation="MKNAIASVNSFSLLGINGLTSSKDVYVLGYNLDNNNGNPMSVQM
                     VRIDLNKKNVQYKSLPNVLSTKGNFWVSVFDSTGTLYLSVNNPRRTIMKLNLKDSIKI
                     DDLGNAFSTGTTLAYSASLGRDGKIYFGGSSGGTYWSSYDPVTKKFDKHPEIDPFNDY
                     VLSIAGDTNFVYAQTGQRNSVQLWSVRKKDEAKKLLCRITNRTRIDMRTFTDGIYVSF
                     SSDTLGGKFKLVNGGLVKVASWPAKYVSYSEVNDVNQPSVSTYFDGTQNKLFFSINHK
                     PYESVDIKTKTIRMDIRKIFAFPNDKDNIYYVGDYYGNYYRYDLKTQTAFLLGATGYN
                     VYSTLALNDSIIYFGGYPSGYVMRWNRNQPWTTQKFINGKVTDAL"
     gene            1516..3543
                     /locus_tag="VEV83_12420"
     CDS             1516..3543
                     /locus_tag="VEV83_12420"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYK45971.1"
                     /translation="MKISLLPRFAVLCFFNFTAAFIYSGKAECQHLLDPYSQPQFVNA
                     LPIPPMKDGREGDTFTISIRQFQQDLGLKDPQTGQPMLTTVWGYDGSYPGPTIIAREK
                     VPLYFFWRNQLYEHKTKKPLPHLLPVDTSIMWALADVPHWEQYGVPVVTHLHGGHTEA
                     VSDGYPEAWFTPLFQKTGPAFVKGDDIPYTYANDRNSATLFYHDHALGITRLNVYAGL
                     IAFYIITDDHEEQLKAEHKLPANKYDIPLVIQDKMFTDDGQLFFPSKPEEPNQPSPSI
                     LPEFFGDFILVNGKIWPVLDVEPRQYRFRILDGSDSRFYNLSLSNGQKFIQIGSDQGL
                     LPSPVAQNELLLAPAERKEVIIDFSDPSLSGQTIIVRNNAKIPFPSGETVDPKTDGLI
                     MAFRVMKPLNTDIPLTKLDERLRTPIDPLVQTGPERQLLLFETEDEYGRIEPILGTVH
                     KGALHFEDPVTENIKLGDTEIWDLYNATEDAHPIHIHQVRFQTISRQKFKADINQKTG
                     QLSDIRLLGQPKKFDLEEDGWKDTQIALPGEVTRVIAKFDLPGEYVWHCHITSHEDHD
                     MMRPFIVSDHAVASTQSGLKQPSVANYLRVYPNPATSFSTVQFKVGTQSKISVKVYDM
                     QQREVKSVFEGVKPAGVYELTLNTTGLSAGIYICRMISNNGVVLQRLIIQR"
     gene            3741..4148
                     /locus_tag="VEV83_12425"
     CDS             3741..4148
                     /locus_tag="VEV83_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45972.1"
                     /translation="MKHYHIVSHAAIYLLAIVMIIFGIFHFMNPRDLLVYVPSSLPGG
                     IAWAYFTGTAFIVVGLAFLTNNFVKLAGYLLAALLIVFIITIHVPNYFNAGDKEMQTT
                     ALINILKDTAIAGFALHIAASAYHQHIHMEHDD"
     gene            complement(4182..5051)
                     /locus_tag="VEV83_12430"
     CDS             complement(4182..5051)
                     /locus_tag="VEV83_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK45973.1"
                     /translation="MIRFNLQKKLFAADGTMQLNVSCSIDAGRFVSLYGTSGAGKTSI
                     LRMLAGFLKPDNGQIQFDDDVWFDHQNKIDVPPQKRNIGFVFQDYALFPNMTVKENLQ
                     FALKKGEAQTIIRELMDLTELESLSNRNVLTLSGGQKQRVALARALVRKPKLLLLDEP
                     LSAIDNELRVKLQDILMRLHRNYDLTAILVSHDITELSRLSDEIFLIDAGTIKIHGSP
                     AEIFYSEDNHSNKVTGSIAEIRKEASTWFLYIAVGNQLLKQPVAENDINEFAKGDKVV
                     FTPSGPGIQKLRL"
     gene            complement(5048..5722)
                     /gene="modB"
                     /locus_tag="VEV83_12435"
     CDS             complement(5048..5722)
                     /gene="modB"
                     /locus_tag="VEV83_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HYK45974.1"
                     /translation="MIDIEPLWLTLKLATVTTFILFIIAVPFANWLSQKRNNFKTIIE
                     AIVSMPLVLPPSVLGFYLLLAFSPSQWFGKFLEQHFDVRLVFSFPGLVIASVIYSLPF
                     MMFPLQSGFSSLSPALREASYSLGKSKWQTLTKVVLPNIKQSLLSGLVLTFAHTIGEF
                     GVVLMIGGNIPGQTKVASIAVYDEVESMNYHSANMYAMILFVSTFVILLTLYFINHRF
                     DRRRAA"
     gene            complement(5765..6502)
                     /gene="modA"
                     /locus_tag="VEV83_12440"
     CDS             complement(5765..6502)
                     /gene="modA"
                     /locus_tag="VEV83_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HYK45975.1"
                     /translation="MFAALFAGSERQPPQKVTVAVAANMQYAIKNLKETFEKQTGISV
                     DVIIGSSGKLTQQIEQGAPFDVFVSADTKYADELYNKKFAAAAPKIYAEGLLVLWTAR
                     NDINLSSNLQLLATDQIKKIAIANPKTAPYGVAAEEALKYYKLYDQVEGKLAFGESIS
                     QTNQFILTQSADVGFTAKSVVLSDEMKGKGKWVAVDTKAYTPISQAAALLQHGEDNNK
                     EAAEKFFKFLYSRSAKEIYKKFGYIVK"
     gene            complement(6713..>7480)
                     /locus_tag="VEV83_12445"
     CDS             complement(6713..>7480)
                     /locus_tag="VEV83_12445"
                     /inference="COORDINATES: protein motif:HMM:NF039201.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45976.1"
                     /translation="PYTVKLYRYNVLYATKTAKVKNITFDSLPVGSYYAKAWGDGATG
                     NAFGKSKTVNVVPIPGTLPATAIGATKATLHWTLVSCAKFDSIYYRVHGTTTWTQKNT
                     VGNKDSLAITGLTASTTYDWQVAAVDSANGIIARGPFSPIAMFITTTTPLANGNSDNS
                     TGAATGTSFNNRITVLPNPAVNYFVIKYFASVHEKVTATLIDVNGKAVWNSGLIDGVS
                     LDGRRVRVDQFAKGIFYLKIINENGELMATAKLVIAK"
BASE COUNT         2069 a         1665 c         1612 g         2134 t
ORIGIN      
        1 agtgcgtcag tcactttacc attgataaat ttttgtgtgg tccatggctg attccggttc
       61 catcgcatta cgtaaccact ggggtatccg ccaaaataaa taatgctgtc gttgagagca
      121 agcgttgaat aaacattgta cccggttgca cccaaaagaa aagccgtttg agttttcaga
      181 tcataacgat agtaattgcc ataatagtca ccgacataat aaatattgtc cttatcattc
      241 ggaaacgcga atattttgcg gatatccatc cggatcgttt ttgtttttat gtcaacactt
      301 tcatagggct tgtgattgat agaaaagaac aatttgtttt gagtgccgtc aaaataagtt
      361 gaaaccgacg gttgattcac gtcatttact tccgaatacg aaacatactt cgcgggccat
      421 gaggccactt ttactaatcc accgtttacg agtttgaact tgccgcctag tgtatcagag
      481 ctgaatgaga catagatgcc gtcggtgaaa gttcgcatgt ctatccgtgt gcgattggtt
      541 atcctgcaaa gcaatttttt agcctcatct ttttttcgaa cgctccacaa ctggacagaa
      601 tttcgctgcc ctgtttgagc gtaaacgaag tttgtatcgc ccgcaatgga aagcacataa
      661 tcattgaacg gatcaatctc cggatgtttg tcgaattttt ttgttacagg atcatagctg
      721 ctccaataag tgccgccgct gcttccgccg aaataaattt ttccatcgcg gccgagactg
      781 gcggagtaag cgagagtagt gcctgtagaa aacgcattac ccaaatcgtc gatcttgatc
      841 gaatctttaa ggtttagctt catgatcgtc ctgcgcggat tgtttacaga caagtacaaa
      901 gttcctgtcg agtcaaaaac cgaaacccaa aaatttcctt ttgttgaaag aacgtttggt
      961 aaagatttat actgcacatt tttcttattc aggtcgatcc tcaccatctg cactgacatc
     1021 gggttaccat tgttattgtc gagattataa cccaatacat acacatcttt tgaagaagtg
     1081 agcccattga tgccaagcag ggaaaatgaa ttcactgagg cgatcgcatt tttcaacgtg
     1141 tctattttgt atgactggca gaaagaagat gtacacagcc caataaataa aaatgtaaaa
     1201 aactttttcc gaagattttg tagcataaga tcaagatcaa attgaagatg tatcgtttag
     1261 ttggcgcaaa gatatttcga tggctgcgac atgtgcacga gcagtttata gaatcgcatc
     1321 gtcggcggtt tttgaagact aagtaattga agatgcagta tggcttacaa tttgctcaaa
     1381 atcttacggc aggttctgcc tgtacgtctt gttgctacgc tatgaaaact ctccaaggct
     1441 ttataaacaa gtttaatgtc tcgtcaaccc tgcacttgtt tcagttacca attgtacatt
     1501 ttaaaaacta cagatatgaa gatttcactt ctacccagat ttgcagtatt gtgttttttc
     1561 aatttcaccg ccgcctttat ttattccggc aaagcggaat gtcaacattt acttgatcct
     1621 tattcgcagc ctcagttcgt aaatgcctta ccaattcctc cgatgaaaga cggacgcgaa
     1681 ggagatacgt tcactatttc tattcgccaa tttcagcaag accttggcct aaaagatcca
     1741 caaaccggcc aacccatgct aactacggtt tggggatacg acggcagcta tcctggtccg
     1801 acgatcatag ctcgtgaaaa agtacccctg tatttttttt ggcggaacca gttatatgag
     1861 cacaaaacga aaaaaccgtt gcctcactta ttgcccgttg atacaagcat tatgtgggcg
     1921 cttgcagacg tgcctcattg ggaacaatat ggagtgcctg ttgtaacaca tttacatggc
     1981 ggacataccg aagccgtgag cgatggatac cccgaagcct ggtttacacc attgtttcaa
     2041 aaaacagggc cggcgtttgt aaagggagac gacattccgt atacatatgc gaacgatcga
     2101 aattctgcca cgctgtttta tcatgatcat gcacttggta taacgaggtt aaatgtgtac
     2161 gctggactta ttgcttttta catcataacc gatgatcatg aggagcaact taaagccgaa
     2221 cacaaattgc ccgcaaataa gtacgacatt cccctggtaa tccaggataa gatgttcact
     2281 gatgacggcc agttgttttt cccttcaaag cccgaagagc ccaatcagcc ttcacccagc
     2341 attctgccgg aattctttgg agatttcata cttgtgaacg gcaagatctg gccagtgctc
     2401 gacgttgagc caaggcaata ccggtttcgt atactcgatg gatcagacag ccgtttttat
     2461 aatttgtcct tatctaacgg ccaaaaattt attcagatag gaagtgacca gggccttttg
     2521 ccgtcaccgg ttgcccaaaa tgaattattg cttgcaccag cagaacgaaa ggaagtgatc
     2581 attgattttt cggacccgtc gttgtcgggc caaaccatca ttgttcgcaa caatgctaaa
     2641 ataccgttcc ccagcggaga gactgttgat ccaaaaaccg atgggctgat catggcattt
     2701 cgtgtaatga aaccgctcaa cacggatata ccgctaacta agttagatga aagattgaga
     2761 actccaatag atccactggt gcaaaccggc ccggaaaggc agttactcct ctttgaaaca
     2821 gaggatgaat atggaagaat agagccgata ttaggcactg tccataaggg cgccttgcac
     2881 tttgaagacc cggtaacgga aaatataaag ctgggcgaca cggagatctg ggacctctac
     2941 aatgcaactg aagatgcgca tcccatccac atacaccagg tgcgatttca aacaataagc
     3001 cggcaaaaat ttaaagcaga tattaaccaa aagaccggcc agctaagtga tattcgtttg
     3061 ctcggtcagc caaagaaatt cgaccttgag gaagatggat ggaaggatac gcagatcgcg
     3121 ttacccggag aagtgacgag agtgattgcg aagttcgatt tgccgggtga atatgtatgg
     3181 cactgtcata tcaccagcca cgaagaccat gatatgatgc gccctttcat tgtaagcgat
     3241 catgcggtcg cttcaacgca aagcggttta aaacaaccat cagtcgcaaa ttatttacgt
     3301 gtttatccta acccggccac gagtttttct acagtacaat ttaaggtcgg cacgcaaagc
     3361 aagatcagcg tgaaagtgta tgacatgcag caacgcgaag tgaaaagtgt ttttgagggc
     3421 gttaagccag ctggcgttta cgaactaacc cttaatacaa cagggctctc cgcaggaatc
     3481 tacatatgca gaatgatcag taataatgga gttgttctgc aaaggctgat tattcaacga
     3541 taagaaattg tgcacgatac aaataaaggg gccggctgag gaaagccagc ctcttctctt
     3601 tttcccgtaa taaaatcttt tgattgaaaa gccgataagt catcgtgtac cgcgtttcct
     3661 gctgaatgtc tccccgaaga ttgacgatgg tcatgtctat ggcaacttcg aagtgctacc
     3721 ttttcaaaaa ttttttcaat atgaagcatt atcatattgt gtcgcacgcc gcaatatatt
     3781 tgctggccat cgtgatgatc atattcggta ttttccattt catgaaccca cgagatcttt
     3841 tagtgtatgt tccgagttca ctgcccggcg gaattgcgtg ggcgtatttc accggcacag
     3901 catttatagt ggtgggtctc gctttcctta caaacaactt tgtaaagtta gcaggctacc
     3961 tgctcgcagc actgttgatc gtgttcatta ttaccattca cgtgcccaat tatttcaatg
     4021 ctggcgacaa agaaatgcag acaacggcat tgatcaacat ccttaaggat acagccatcg
     4081 caggttttgc attgcatatt gctgcaagtg cctaccatca gcatatccat atggaacacg
     4141 atgactgatt aaacacaatt gcccgtttag atttctcccc gttaaagtcg cagcttctgt
     4201 atgcccggcc cggaaggtgt gaaaacaact ttatcaccct tcgcaaattc attgatgtcg
     4261 ttttcagcaa ccggctgttt tagcaactgg ttgcccacag caatatacaa aaaccacgtt
     4321 gacgcttctt ttctgatctc tgcgatgcta ccggtaactt tattactgtg gttgtcttct
     4381 gagtaaaaga tctctgcagg tgagccgtgt atttttattg ttccggcgtc aattagaaat
     4441 atttcatcac taagccttga gagctctgtg atatcatgac taacgagaat agcagtaaga
     4501 tcatagtttc gatgcagccg catcaggatg tcctgcagct ttacgcggag ctcgttgtcg
     4561 atagccgaaa gcggctcatc gagcaatagc aatttgggtt ttcttaccag cgctcttgcc
     4621 aaagcgacac gctgtttttg accaccggaa agcgtgagca cattcctgtt gcttaaagat
     4681 tcgagttcag tcagatccat taattccctg ataatcgttt gcgcttcgcc tttcttcagt
     4741 gcaaattgca aattctcttt tacagtcata ttcgggaata aggcgtaatc ctggaacaca
     4801 aaaccaatat tccttttctg cggaggaaca tcgatcttgt tttggtgatc aaaccaaaca
     4861 tcatcatcaa actgtatctg tccgttgtct ggtttcagga aaccggccag cattcgaaga
     4921 atggatgttt tgcctgctcc ggacgtacca tacaaactca cgaatcttcc ggcatcgata
     4981 gagcaggaaa cattcaattg catagttcca tccgcggcaa ataatttttt ttgcaggtta
     5041 aatcggatca tgctgctctc ctcctgtcaa accgatgatt aatgaagtac aacgtaagaa
     5101 ggatgacgaa tgtgctaacg aaaaggatca tcgcgtacat gtttgcgctg tgatagttca
     5161 tcgattccac ttcgtcatac acagcgatcg aagcaacttt tgtctggccc ggaatatttc
     5221 cgccgatcat tagtacaaca ccgaattcac ctatcgtatg cgcaaacgtg agcaccaggc
     5281 cggagagtaa ggactgttta atatttggca ataccacttt tgtgagtgtc tgccatttgc
     5341 ttttgccaag tgaatatgaa gcttcgcgta atgcgggcga taagctgctg aacccggact
     5401 gcaaagggaa catcataaaa ggtaagctat agatcaccga cgctatcact aaacccggaa
     5461 aagaaaatac aaggcgtacg tcaaaatgct gttctaaaaa ttttccaaac cattgcgatg
     5521 gactgaaagc aagcaagaga taaaacccca gcactgatgg tggcagtacc agtggcatac
     5581 tcacaatagc ttcaatgatg gttttgaagt tatttctttt ttgcgagagc caatttgcaa
     5641 agggcactgc gatgataaat aaaataaatg ttgttacggt tgctaatttc agcgtgagcc
     5701 ataaaggttc aatatcgatc atctgagttg tggttattca tttaaccgct gtaattatcg
     5761 ccggtcattt cacaatgtag ccgaattttt tataaatttc ttttgcagat cttgagtaca
     5821 ggaatttgaa aaatttttca gcggcctctt tattgttgtc ctcgccgtgt tgcagtagcg
     5881 cagctgcctg tgaaattggc gtgtaagcct tcgtatccac agcaacccat ttgcctttgc
     5941 ctttcatttc gtcagagaga acaaccgatt tcgcggtaaa gcccacgtcg gcagattgcg
     6001 ttagaatgaa ctggttcgtt tgtgaaatgc tctctccgaa agccaatttg ccctcaactt
     6061 gatcatataa tttatagtac ttcaaagcct cctcagcagc cactccgtaa ggcgcagttt
     6121 tgggattggc aatagcgatc ttttttatct gatcggttgc taacagttgc agatttgatg
     6181 ataggtttat atcgttgcgt gccgtccata aaaccaacaa gccttcagca tatatcttcg
     6241 gcgcagccgc tgcaaacttt ttattataca actcgtcggc gtattttgtg tctgcagaaa
     6301 cgaaaacatc gaacggtgct ccttgttcta tttgttgggt gagtttgccc gatgaaccga
     6361 tgatcacatc aacgcttatt ccggtttgtt tttcaaatgt ttctttcaaa tttttaatgg
     6421 catattgcat attcgcagca accgcaacgg ttactttttg cggcggttgt ctttcggatc
     6481 ctgcaaagag tgcagcaaac atcaaaacga taattgtttt ttgcatagtg cgatcaaggc
     6541 aaacgatact gccggtacaa aagtaacggt ctatactatg acgatcggtt gcataaagat
     6601 ttacaagggc ttgacgaaac gattatcttg gaaaataaag aatcggcaaa tgcagttgca
     6661 taaaaaagcc ccgcgcgatt tcgcaacggg gccgcatagt tttcaaaggt gattattttg
     6721 cgatgacaag tttcgcagtt gccatcaatt caccattttc gtttatgatc ttcagataga
     6781 aaattccttt tgcgaattga tcaacgcgta cgcgccttcc gtcgagcgaa acgccatcta
     6841 ttagtcctga gttccaaact gcttttccat tcacatcgat caaggttgcc gtcactttct
     6901 catgcacgga agcaaaatat ttaatgacaa agtaattgac tgccggattt ggtaagaccg
     6961 taattctgtt gttgaagctc gttcctgtcg cggcgccggt cgaattgtcg ctgttgccat
     7021 ttgcgagcgg cgtcgtggtg gtgataaaca tcgcaatcgg tgaaaatgga cctctcgcga
     7081 tgataccgtt tgctgagtca accgcagcca cttgccagtc ataagtggta cttgcagtaa
     7141 ggccggtgat cgccaggctg tctttatttc ccacggtgtt tttctgtgtc catgtagttg
     7201 taccatgcac acgataataa attgaatcga attttgcgca agacaccaac gtccagtgca
     7261 gcgtcgcctt tgttgcacca atagctgtag ctggaagcgt acctggtatc ggaaccacat
     7321 ttacggtttt gctctttccg aatgcgttgc cggtagcgcc gtcgccccat gctttcgcat
     7381 aatacgagcc aaccggcaag gaatcgaatg taatgttttt cactttcgcg gtttttgttg
     7441 catacagaac gttataacga tacaacttca ccgtgtaagg
//
LOCUS       DASQJI010000440         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2662485,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000440 DASQJI010000000
VERSION     DASQJI010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2662485"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1290
                     /locus_tag="VEV83_12450"
     CDS             <1..1290
                     /locus_tag="VEV83_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK45977.1"
                     /translation="EERTLFYERKISSADKIRVGVIGFGIQGHFDLQTALKVPGVELA
                     GICDLYTGRIQNAKELYGNDLFTTRNYKELLDKADIDAVIIATTDCWHARITKDALAK
                     GKAVYCEKPMVYKISEGPDVIEAQKKSGKVLQVGSQRVSSIGLAKAKELLAAGEIGKL
                     NMVNAVNDRQSAIGAWEYTIPKDASAETTDWEEFIKVTEKMPYDPKKFFWWRAFREVG
                     TGVAGDLYIHLLSGTHFITNSKGPETIYSAGQFSYWKDGRNMPDVMAGVMQYPDCAEH
                     PAFQLTLQVNFISGTGGSELTRFVGSEGTIEVQGNNLTVKHSIMPEAPGFGGYDSVFT
                     FPKALQEEMQQDYNAKWTDAQKKKPTKDDIIFKAPVGYSDHLDHFTNFFDSIRSGKPV
                     VEDATFGFRTAAPALSCNESYFQKKIIKWDPVNLKLV"
BASE COUNT          469 a          298 c          387 g          355 t
ORIGIN      
        1 gaagagagaa cgttgttcta tgagagaaag atctcatcgg ccgataagat acgcgttggc
       61 gttatcggtt tcggtataca gggacatttt gacctgcaaa ccgcattaaa agtgccgggc
      121 gttgaactgg cgggtatttg cgacctctac accgggagaa ttcaaaatgc aaaagaactg
      181 tatggcaacg acctgttcac gacaagaaat tacaaagagc tgctggacaa agcagatatc
      241 gatgcggtga tcatcgccac caccgattgc tggcatgcac gcatcacaaa agatgcgctg
      301 gcaaaaggta aagctgtcta ttgcgaaaag ccgatggtct ataaaataag tgaaggaccg
      361 gatgtaatag aagcgcaaaa aaaatccggc aaggtattgc aggtgggcag tcagcgcgtg
      421 agcagcatcg gcctcgcaaa agcaaaagaa ttattggcgg ccggagaaat cggaaagctg
      481 aacatggtga atgcagtgaa tgacaggcaa agtgcgatcg gagcgtggga gtatactatt
      541 ccgaaagatg caagcgcaga aacgacggat tgggaagagt tcataaaagt gactgagaag
      601 atgccgtatg atccaaaaaa atttttttgg tggcgtgcat tcagggaagt cggcaccggt
      661 gtcgccggcg atctctacat tcatttgtta agcggcacac atttcatcac aaattcaaaa
      721 gggcctgaaa caatttatag cgcgggacag ttcagctact ggaaagacgg ccgaaacatg
      781 cccgacgtga tggcgggtgt aatgcagtac ccggattgcg cggaacatcc tgcattccag
      841 ctaacgctgc aggtaaattt catcagcggc accggtggaa gtgagttgac gagatttgtc
      901 ggctccgagg gcacgataga agtgcaggga aataatctta cagtaaagca cagcatcatg
      961 cccgaggcgc cgggatttgg cggctatgat tctgtcttca ctttcccgaa agcgttgcag
     1021 gaggaaatgc aacaagacta caatgcaaaa tggaccgacg cgcaaaagaa gaaaccaacg
     1081 aaagacgaca ttatttttaa agcaccagtt ggttatagcg accacttaga tcatttcacg
     1141 aatttcttcg attcgataag atccggcaaa ccggtggttg aggatgcgac ctttggtttc
     1201 cgaacagcgg cacccgcatt gtcgtgcaat gaaagttatt ttcaaaagaa gatcatcaaa
     1261 tgggatcccg tgaatttgaa gctcgtgtaa gatgaaggct acggagggta attctgagaa
     1321 ttgaggattg actgattaat tattgatttt tttttagaac gtcttttaaa atattcaata
     1381 atcaataacg aatattcaat aatcattggc tttcatttca ccccggctga ttaccgctta
     1441 ttgaggattt atttattatt gaaggtttga aaccgattga aaccgaaatg ttcaacgatc
     1501 aattttcaa
//
LOCUS       DASQJI010000441         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_820604,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000441 DASQJI010000000
VERSION     DASQJI010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820604"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VEV83_12455"
     CDS             <1..320
                     /locus_tag="VEV83_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HYK45978.1"
                     /translation="EYSGPLYQSMKVEGNKIIISFTHVGTGLIAKGNGDLKYFSIAGA
                     DKKFVWATAKIEGNKVIVWSDAIADVVAVRYAWADDPEGANLYNAEGLPASPFEARKA
                     HGP"
     gene            1496..>1771
                     /locus_tag="VEV83_12460"
     CDS             1496..>1771
                     /locus_tag="VEV83_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-N-arabinofuranosidase"
                     /protein_id="HYK45979.1"
                     /translation="MSKFKSIFTIAATTIFFACNNNSTNQTTDEDSARSTTASKKYLS
                     QPLITNIYTADPSAHVFNGRIYIYPSHDTDTGVPEDNLGSHFNMMDYH"
BASE COUNT          552 a          332 c          393 g          494 t
ORIGIN      
        1 tcgagtattc ggggccgctt taccaatcaa tgaaagttga aggcaacaag atcatcatca
       61 gttttacaca tgtgggcacc ggattgatcg cgaaaggcaa cggcgaccta aaatattttt
      121 caatcgccgg agccgataaa aaatttgttt gggcaaccgc aaaaattgag ggcaacaaag
      181 tgatcgtttg gagtgatgcg atcgcagatg ttgttgcagt tcgatatgcg tgggctgatg
      241 atccggaagg cgcgaacctg tacaacgcag aaggtttgcc ggcgtcgccg tttgaggcga
      301 gaaaagccca cggcccctga aagggaagtg acgatcgtcg ctatttttat ggcaagctgt
      361 aactcccttc gtgctgttcg aatcagcgcg gtccttgcag taaaatagtg tccaagtttc
      421 atgaacggga ccgcacgtct ttcccgcgaa ggcgggaatc tgctaacttt agtttatgca
      481 atgtggaggg acagtctaca tcttaacaag tgtgcatcat gaagtcttgt acattggcgt
      541 gaactctaac ctttttacaa gaattcgaga gcatatcatg aaggtttatc gaaatttatt
      601 tacgcaaaat ataattgcaa caagcttgtt tactacgata catttggcag aatagaggat
      661 gcaattgcaa gagaaaaacg agtgaaaaaa tagaagtgat catggaggaa taaattgatt
      721 tgggatttca atcccgggtg gaaagattta tgtattggcc ttaaaattag ttaaagcaga
      781 tgcccggtcg cggctgggca tgacggcgtt gtggttacca ttcgttagga gcaaactagc
      841 ttaacagaaa ttttttcgtt gtcgatctta atggcacaac gcgtttgatt ttaataaaat
      901 gaataagatt gtttcgctcg tgagataaga ttttactaag gtgataacgt ttttatgcgt
      961 aaaaatcggg cattgacatt tttcgttacc aacaagtaag tatgagagca taactaatga
     1021 ccctagtaag catgtgcttt taaaaaagtt gttgagcagt ttgcgctact ccaaccaacg
     1081 atttaatttt aataaggtaa taaggttgcg acgttttcgt atgggtgatt tctactaagg
     1141 ttataaggtt tgacgctcaa tgaatagcca gggttacgtt tatgcgatga aaaatccgac
     1201 agacaaataa ccccatttca tggagatatt tttaacgcat tcaaccttat ccaccttagt
     1261 aacaactgta tgtagtaagg catgccgacc ttataaacct tattgaggaa ctttcctggg
     1321 cgtcagcatt tgcgatagat cttatattta accaggttga aatgtgagca ttgttgcgta
     1381 aagaaatgca gtacaagagt gcgacgcaag gaacgatgcc atgaaataca gttgttggtc
     1441 cccaaaaata aaatgtataa caattaactt cactgactac aactaacacg tcgccatgag
     1501 caaattcaaa tcaatattta caatagcagc aacaacgata ttttttgcct gcaacaataa
     1561 ttcaacgaat caaacaacgg atgaagattc cgctaggagc acaacggctt caaaaaaata
     1621 tctatctcaa ccgctgataa ctaatattta tacagcggat ccatcggcac atgtgttcaa
     1681 cggccgcatt tatatttatc cttcgcatga cactgatacc ggtgtgcctg aggataattt
     1741 aggcagccat ttcaatatga tggattatca t
//
LOCUS       DASQJI010000442         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2202406,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000442 DASQJI010000000
VERSION     DASQJI010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2202406"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VEV83_12465"
     CDS             <1..349
                     /locus_tag="VEV83_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK45980.1"
                     /translation="FDMVEGHRPFDFILSNTNKDLVKMELDLAWATKANQDPVELFKQ
                     HPGRFPLWHVKDLDPDTKKPTEVGKGYVNFKHAFDNVGESGMKYFFVEQDFAPDPLQN
                     VTNSYNYLKKMLA"
     gene            504..1538
                     /locus_tag="VEV83_12470"
     CDS             504..1538
                     /locus_tag="VEV83_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome D1 domain-containing protein"
                     /protein_id="HYK45981.1"
                     /translation="MKWILLFAACVVFSIAANRGAAQETTGSSQSSLLALSKADHTLA
                     IIDPVTLKVLTRIPVGSDPHEVIASSDGKTAYVSIYGGGSLHELNIIDLVSQKPLTNV
                     DTRPLFGPHGLVFVNGKLWFSAEGSKAVGRYDPATGSIDWSMGTGENRTHMIYVTADG
                     KKIYTTNVSSGTVSILVDTFIQPGQMAPAGARPHEDWIQILIATGTGSEGFDVSPDSS
                     ELWTACSDDGTISIIDLNAKKIKTKIEANVTGANRLKFSPDGKLVFISSLRSGDLTIY
                     DARSHKEIKRLNIGHGGAGILMQPDGSRAFVACSPDNYIAVIDLKTLQVTGHLDVGGT
                     PDGLAWATRK"
     gene            1578..>1822
                     /locus_tag="VEV83_12475"
     CDS             1578..>1822
                     /locus_tag="VEV83_12475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase"
                     /protein_id="HYK45982.1"
                     /translation="MKLFKTSKGIILEREEKNYLLQDDWDELINRDGLFRFLSERAKN
                     EKQIDADLRDMLIDNFLQAPIGSQEVWAAGVTYLRSR"
BASE COUNT          543 a          362 c          439 g          478 t
ORIGIN      
        1 attcgacatg gtcgaaggcc atcgtccttt cgattttatc ctttcaaata ccaataaaga
       61 tcttgtaaag atggagcttg atcttgcgtg ggcaacgaag gcgaaccagg atcctgttga
      121 attattcaaa caacatcccg gtcggtttcc attatggcat gtaaaagatc ttgatcctga
      181 cacaaaaaaa ccaactgagg tcggtaaagg atacgtgaat ttcaaacacg cttttgataa
      241 cgttggcgaa tcggggatga aatacttctt cgtagaacag gatttcgctc ctgatccgtt
      301 acaaaatgta acgaacagtt acaattattt gaagaagatg ttggcctgag gaggaagatg
      361 cgcagcctga tcacaggcga taaataagtt ttttgcaacg gcaattacag ggactttttg
      421 gacagttgta aaactttttg tcggtgtctc atttaataat ctttcaactg atgaaatata
      481 ttaatgacac caaacaaatg tcgatgaaat ggattttgct ttttgcagca tgcgtcgtgt
      541 tttcgatagc cgcaaacagg ggggcggcgc aggagacaac aggcagctca caatcatcgc
      601 tgctcgcact ttcaaaggca gaccacactt tagccatcat tgatcccgtt acattaaaag
      661 tgctgacccg catacccgtc ggtagtgacc cgcatgaagt gatagcctcg tcggatggaa
      721 agactgccta tgtttccatt tacggcggag gaagcttgca tgagttaaac attattgatc
      781 ttgtttcaca aaaacctctg accaacgtag atacgaggcc gcttttcggt ccgcatggtc
      841 tcgtgtttgt gaacggaaaa ctttggttta gcgcagaagg ttctaaagct gtcgggcgct
      901 atgaccctgc aacgggaagc atagactgga gtatgggtac aggcgaaaac aggacacata
      961 tgatctacgt taccgccgac ggaaaaaaaa tctataccac aaatgtttct tcgggcacgg
     1021 tgagtatcct ggttgatact ttcatacagc ctggacaaat ggctcctgcc ggcgcgaggc
     1081 cgcacgaaga ttggattcaa attctaatag caacgggaac aggttcggag ggatttgatg
     1141 tgtcgcccga cagcagtgaa ttgtggactg cgtgtagcga tgacggaacg atttcaatca
     1201 tcgatcttaa tgcaaaaaaa ataaaaacaa aaattgaggc aaacgttacc ggtgctaacc
     1261 gtttgaaatt ttcacctgat ggtaaactcg ttttcatttc tagtcttcgc tcaggagatc
     1321 tcacgatcta tgatgccaga tcacacaaag aaataaaacg attgaacatt ggtcatggtg
     1381 gtgctggtat tcttatgcag cctgatggct cgcgcgcatt tgtggcctgt tcacccgata
     1441 attatattgc ggtaatagat ctaaaaacgc tgcaagtaac cggtcatctt gatgtgggtg
     1501 gaacaccgga tggactcgca tgggcaacaa gaaaataagc aaactattaa agacggtcaa
     1561 ctgtatttgt aaggtcaatg aaattattta aaacatcgaa agggatcatt cttgaaagag
     1621 aagaaaaaaa ttatttgctg caagatgatt gggatgagtt gataaaccgg gacggccttt
     1681 tccgattttt gtcggaacgg gcaaaaaatg aaaagcaaat tgacgctgat ctgcgcgata
     1741 tgttgatcga caactttctg caggcgccga ttggatcaca ggaagtgtgg gctgctgggg
     1801 taacttattt aagaagtcgc ga
//
LOCUS       DASQJI010000443         6518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_512316,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000443 DASQJI010000000
VERSION     DASQJI010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6518
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512316"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..2911
                     /locus_tag="VEV83_12480"
     CDS             71..2911
                     /locus_tag="VEV83_12480"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK45983.1"
                     /translation="MRKNLLFTLLGFIAVGSLRAQTNTFPTTGAAGIGTLTPNASSLL
                     DISSTSKGILIPRMTKAQRDAIVSPPTGLMIFQTNSTPGFYYFDGSSWAAVSPKGVNK
                     SLSNLTAPTGINVDLLPGGTNALNIGSASNAWKDVYIGGSINLSGQKFIDNAGTSNTF
                     LGYTGNTTNTGSQNTFVGNSAGAANTSASNNSFFGYTAGYGNTTGSDNSFFGQGAGYA
                     NGAGNSNSYFGKAAGYFNTTGTANTLLGYGAGYANTGSSNTFVGYRSGQNNTTGFSNV
                     AVGAAALYSSTTASNLVAVGDSALYSQAGGSYYNTAVGSKALFANTTGNYNNANGYLN
                     LYQNTTGSHNTATGSFALIKSTVADGNTATGASTLFDNTIGSFNTATGYATLTSNTTG
                     NSNTATGRLALAGNFTGSTNTADGVQALYSNMAGYSNVGVGVSALFSSKDKNNLVAVG
                     DSALYNNGTNATLAVHSTKNTAVGSKALYANTTGFGNTAQGFNALYSNTTGNSSVAIG
                     VNALYANTIVNKVVAVGDSALMNNGKGSLQPKEGWENTAVGSKALFSNTIGSYNTAVG
                     FEALRANTTTSYNAAFGAEALADNTTGTSNTALGSLSLTNNTTGFNNVAIGTGAMATN
                     YTGARNTTVGYFADVDAIGLANATAIGSGALVDASNKVRVGNTSVTSIGGQVGWTTFP
                     SDGRYKKNIKEDVQGLKFINSLRPITYTIDMDGLNNYFEKNKKHDEAYEKMKEDRKSS
                     TDEAAKVVYNGFIAQEVEAAAKKLNYNFSGVDKPKTDDGLYGLRYGDFVVPLVKAVQE
                     LSKMTNEKDAQIDELKKENDAQQKQIDDLKAMMQQIQQNLNSCSPCAGNSSIQQSAKI
                     LSVSNASLEQNIPNPFNHTTTINYNLPQQFSSAKIIVTDKAGKILKEANLSGSGKGSL
                     IVDASMLSSGAYQYSLYVDARLIETKQMEHVK"
     gene            3571..5253
                     /locus_tag="VEV83_12485"
     CDS             3571..5253
                     /locus_tag="VEV83_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45984.1"
                     /translation="MKKLFSLFVSIMTATIIFAQGVAINSDGTAADASAMLDVKSTTK
                     GMLAPRMTTTQRTAIVSPAMGLLVYDTDTKSLWQFNGTAWVNMASGGGGLVLPYSGSV
                     NLGTPGFDITNQGSGAAIQVTSPNDLGIGLSARASGPFGWALHAYTNRPGANSIYAIT
                     DSGAVFHGENNYVNNANTLMSLVNRGIAKTSTFQLSNSASTSSNVQIAGNNLGEQLVI
                     LQTNASNAKAAVSISNSGNGPGVSSLTANGTGLFGSSTNAIGVSGVSGSNYGVKGVTS
                     SNIGYAGVYGANQGNSGTGVYGINYGTAGAGVSGTSNAANTVGVAGGSTSGTAVKGTT
                     DTYIGVWGTANTGTALYATSTSGYALESYGKVKIAGGNTNPAAGKVLTSDASGNATWQ
                     TPASTPKIAFMAAGIANPLTTNIVPSSPDIYTYYQKVEFKSEGYDFGNVYSLFGGSVT
                     NGSSCFTVPVQGLYHFDAALKYLFGNIFDYRAIEIALILRRNGTNSEIYKGGGYINDV
                     DNTMVSVAGDYTLQAGDQVFIATRQFNIASIPSSMIDSYSQCYFSGHLVFTF"
     gene            5336..6394
                     /locus_tag="VEV83_12490"
     CDS             5336..6394
                     /locus_tag="VEV83_12490"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45985.1"
                     /translation="MKSTIAVLLLLVVTNLHAQTVLRVGTGTTIKSSGGASINLKDVN
                     LENNGTINQAKGDGSFRFSGKKNATISGSSSPTFAILKIAKTNAKVSLTTNINIVSSV
                     AFTSGLLDLNKKNMTLNASASVSGESETSHIIGPLGGEVIITVNMNKPTAVNAGNLGA
                     VITSAFDLGQVTIRRGHKLQSGTGMQGSIARYYSIVPSSAQTSTVRLYYLDTELNGKI
                     ENQLKFFRSADNGSSWVDQSFTSRDAAGNWVEKTGVTAFDRLTLSSDVAFTGITTDPS
                     SELAQQDKMMLKKFVVGPNPNNGNFWFVINGIDKATTVSLFTTDGKRVKEFRVSDQRQ
                     QQVNGIANGVYLLTAPGL"
BASE COUNT         1947 a         1473 c         1496 g         1602 t
ORIGIN      
        1 atttgatctt aagatgtttt gatcaagtgt tcgattggtt ttttaaaaaa tcatcactaa
       61 aaatgcaatt atgagaaaga atttgctctt cacactttta ggctttatag ccgtaggctc
      121 gctgcgtgca caaacaaaca cattcccgac aacgggcgct gctggcattg gtacgctcac
      181 gccaaatgca tcttcactgc tcgacatcag ttccacatca aaaggcattt tgattccgcg
      241 gatgacaaaa gcacaacgcg atgcgatcgt ctctccgccg actggattaa tgatctttca
      301 aaccaacagc acgcctggct tttattattt cgacggttct tcatgggctg cagtttctcc
      361 aaaaggagta aataaatctt tatccaatct taccgcaccg accgggataa atgttgatct
      421 gcttcccggc ggcactaatg cgctcaacat tgggtctgcg tcaaacgcgt ggaaagacgt
      481 ttatatcggt ggatcgatta acctcagcgg acaaaagttt atcgacaatg ccggcacgtc
      541 caatactttt ttaggataca ccggtaacac cactaacacc ggatctcaaa acacttttgt
      601 cggcaactct gcaggggccg cgaacacgtc tgccagcaac aactcatttt ttggatatac
      661 tgccgggtac ggaaatacaa ccggctcaga caattcgttc tttggacagg gcgcaggcta
      721 tgcaaacggt gccggtaatt caaactctta tttcggtaag gcggcaggtt atttcaacac
      781 aacaggaacc gcaaatactt tactgggtta cggcgctggt tatgcgaata caggcagcag
      841 caataccttc gtcggatatc gttctggtca gaataacaca acgggctttt caaacgtcgc
      901 ggttggagcc gcggcgttat attccagcac aaccgccagt aacctggtgg ctgtaggtga
      961 ttccgcactg tacagtcaag ccggcggctc ttactataat acagctgtag gcagcaaagc
     1021 tctttttgca aacaccacag gtaactacaa caatgcaaat ggttacctga atctttatca
     1081 gaatacaacc gggtcacaca atacggcaac cggaagtttt gctcttatta aaagtactgt
     1141 tgcggacgga aataccgcca ccggtgcttc gacacttttt gataacacca tcggatcgtt
     1201 taacacggcg accggctatg caacgcttac ctcgaacacg acgggcaatt ccaacacagc
     1261 taccgggcgc ctcgcattgg ccggtaattt caccggcagc accaatactg cagacggagt
     1321 gcaggctctc tattcgaata tggccggata ttcgaacgta ggcgttggag taagcgcatt
     1381 attttcaagt aaggataaaa ataatttagt tgctgttggc gacagtgctc tatataataa
     1441 cggcaccaac gcaacactcg ccgttcactc cacaaagaac acggcagtag gcagcaaagc
     1501 actttacgcc aacaccactg ggttcggaaa tactgcacag ggattcaatg cactttattc
     1561 aaatactacg ggcaattcaa gcgtggcaat cggcgtgaac gcactttacg ccaataccat
     1621 cgtaaataaa gtagtcgctg ttggggacag tgctttaatg aataatggga aaggctcttt
     1681 gcaacccaag gagggttggg aaaacaccgc ggtaggaagc aaagcgctct tttcgaacac
     1741 gattggctcg tataacacgg cggtcggctt tgaggcactc cgtgcgaata caaccacaag
     1801 ctataatgcc gcattcgggg cagaagcgct agccgataat acgacaggca ccagcaacac
     1861 tgcgctcggt tccctgtcgc ttactaacaa tacaaccggc tttaataacg tcgcaatagg
     1921 taccggagcc atggctacaa attataccgg agcccgtaac accaccgtgg ggtactttgc
     1981 ggacgtggat gcgattggtt tggccaatgc gactgcgata ggttccggcg cgctggttga
     2041 tgccagcaat aaggtacgcg taggcaatac cagtgtcacc agcattggtg gccaggtggg
     2101 ctggaccact ttcccttctg acggtaggta caagaaaaac atcaaagaag atgtacaagg
     2161 actgaaattc atcaatagcc tgcggccaat tacatacacg atcgatatgg atggactgaa
     2221 taattatttt gaaaagaaca agaagcatga tgaagcttac gaaaaaatga aagaggacag
     2281 aaaatcgtct acggatgaag ctgcgaaagt tgtgtacaat ggttttattg cgcaggaagt
     2341 ggaagctgcg gcaaaaaagt tgaactataa tttcagcggt gtcgataaac cgaaaaccga
     2401 cgatggttta tatggccttc gttatggcga ttttgtagtg cccctggtga aagcagtgca
     2461 ggagttaagc aaaatgacca atgaaaaaga tgcacagatt gatgaactaa agaaggaaaa
     2521 tgatgcacaa caaaaacaaa ttgatgattt aaaagctatg atgcagcaga tccagcagaa
     2581 tttaaacagt tgcagcccat gtgcaggaaa ttcatcaatc cagcagtctg cgaagatctt
     2641 gtcagtaagc aacgcttcac ttgagcaaaa cattccgaat cctttcaatc atacaacaac
     2701 gatcaattac aatttgccac agcaattttc atcagcaaaa attattgtta cggataaagc
     2761 aggtaaaatt ctgaaagaag ctaatttatc tggtagtgga aaaggtagtt tgatcgttga
     2821 tgcgtcaatg ctttcgtcag gcgcctatca atattcgttg tatgtggatg caaggttaat
     2881 tgaaacaaag cagatggagc acgttaaata aacgcaggga catccgattc ttttcgggat
     2941 ggttttcaca aaataaaaat caagaaacaa aacgcaagaa acaagaacca aaaaacaata
     3001 agcaaaaacc aagaaacaag aaacaaataa accaaacaag aaaattgtga aagaccgctt
     3061 ctgaaagagg cggttttttt gcaacacgaa aaattataga aaggggttat ttctcacaga
     3121 tgacactgat gtgcacagaa ttttttacgc cagaaaattc acccagtctg tttcgtcctt
     3181 tcatctgcga aaatctgtgc tatctgtgag acaaacacag ctttggcgcc ctcgagttac
     3241 tccgcctatt tgcatgatat ctgctaagaa ttattttctc acagatgccg cagatgtgca
     3301 cagatttttc ttgccacaat agttgcttaa ttactcaact tctttcatct gcgaaaatct
     3361 gtgctatctg tgagacacca ctttatattg gcacgcgctg cccttgaccg tcaaaatcgg
     3421 tgcagccctg tcatcactgc ctgcatttac ccccgattcg tttcaactta aacacgattc
     3481 aattaaaacc taacaaccat caactgctaa aaattgtttt tgcctcactg ctaaagcatt
     3541 tttgagttag aaaatcaaaa ctcaaacatc atgaaaaagt tattctcttt attcgtttcc
     3601 atcatgacgg ctacaataat ctttgcacag ggtgtcgcca tcaacagcga cggcacagca
     3661 gccgatgcaa gcgctatgct cgatgtaaaa agcacaacga agggcatgct agcccctcgc
     3721 atgacaacta cgcaacgtac cgcgatcgtt tccccggcaa tgggtttatt agtttatgac
     3781 acggatacta aaagcctctg gcaatttaat ggaacagcct gggtgaacat ggcttcgggt
     3841 ggcggcggcc tggtccttcc atattcagga agtgtaaatc taggaacacc gggtttcgac
     3901 ataacaaacc agggttccgg agcggcaatt caggttactt cgccgaatga tcttggtatc
     3961 ggtttgagcg cgagagcttc aggaccgttt ggctgggctt tacacgcata tacaaaccgg
     4021 cccggcgcaa attccatcta cgcgatcacc gacagcggtg cggtatttca tggtgagaac
     4081 aattatgtaa ataatgcaaa tacgctgatg agcctcgtca acaggggtat cgcaaaaact
     4141 tcaactttcc aattatccaa cagtgccagc acctcgtcta acgtgcagat agcgggcaac
     4201 aatctcggcg aacaattagt aatacttcaa acaaacgctt cgaatgccaa agccgctgtt
     4261 tccatcagta attctggtaa tgggccaggc gttagttcac tcactgctaa cggaactggt
     4321 cttttcggca gcagtacaaa tgcaatcggc gtgtccggcg tgagcggaag caattatgga
     4381 gttaagggcg ttacaagcag caacatagga tatgcaggtg tgtacggtgc aaatcaaggc
     4441 aattcaggaa ccggtgtata tggtataaac tacggtactg cgggcgcggg cgtaagcgga
     4501 acttccaacg ctgctaatac agtaggcgtt gcaggaggtt caacaagtgg aaccgccgta
     4561 aaaggtacca ccgatacgta cataggcgtt tggggaacag ccaacaccgg gaccgccctt
     4621 tatgcaacaa gtacaagtgg ctatgccctt gaatcctacg gcaaagtaaa aatcgcaggt
     4681 ggcaatacaa atccggcagc aggaaaagta ttgacaagcg acgcttcagg caatgccact
     4741 tggcagacac ccgcgtccac accgaaaatc gctttcatgg ctgcaggcat cgccaatcca
     4801 ttgacgacga atattgttcc atccagtcct gatatataca cttattacca gaaggtagag
     4861 tttaaatctg aggggtatga tttcggaaat gtctattcgc tctttggtgg aagtgttacc
     4921 aatggctcca gttgttttac cgtgccggta caaggcctct atcattttga tgccgctctt
     4981 aaatatttat tcggcaacat tttcgattac agggcgattg aaatcgccct gatattaaga
     5041 agaaacggca ccaactccga aatatacaaa gggggtggct acataaacga cgttgacaat
     5101 acgatggtga gtgtggctgg cgactatact ttgcaggcgg gcgaccaggt ttttattgcg
     5161 actcgccaat tcaacatagc atccattcca tcatcgatga ttgactccta ttcacaatgt
     5221 tacttttccg gccatttggt gtttactttt taaaaccgca actgcggtgg cgcaacaatt
     5281 ttaaatgatt gcgccatcat cgattcacaa tttaaatgaa catcaaatga attttatgaa
     5341 atcaacaata gccgtgcttt tgttactggt agtaacaaat ctacacgcac aaacggtgtt
     5401 aagagtgggg acgggcacta cgatcaaaag ttccggtggt gcatcgatca acctgaagga
     5461 tgtgaacctc gaaaacaatg gcaccatcaa ccaggcaaag ggtgacggaa gcttcaggtt
     5521 tagcggaaaa aagaatgcca ctataagcgg tagcagctct cccacattcg cgatactaaa
     5581 gatcgctaag acaaacgcaa aagtgtcgct cacgacgaac attaatatcg tttcctcagt
     5641 agcgttcacc tcgggtttgc ttgacctaaa caaaaaaaat atgacgctga atgcatcagc
     5701 atctgtctcc ggcgaatctg aaactagtca catcatcggg ccgttgggag gagaggttat
     5761 catcaccgtg aacatgaaca agccgactgc tgtgaatgcc ggaaacctcg gggccgtgat
     5821 tacatcagct tttgatttgg ggcaagtcac gattcggcgc ggacataaat tacaatcagg
     5881 cacaggcatg cagggaagta ttgcacgtta ttattctatt gtcccaagtt cggcgcagac
     5941 ctcgacggtt cgtttgtact acttagatac tgaactgaac ggcaaaatag aaaatcaact
     6001 caagtttttt cgaagcgcag ataatggcag tagctgggtt gatcagtctt tcaccagtcg
     6061 cgatgcagca ggcaactggg tggaaaaaac gggtgttact gcttttgatc gtttaacgct
     6121 gagcagtgat gttgcattta cgggaataac tacagatcct tccagcgaat tagcacaaca
     6181 agataaaatg atgctgaaga aatttgtggt gggacccaac ccgaacaacg gaaacttttg
     6241 gtttgtcatc aacggcatcg acaaagcaac gaccgtatca ttattcacca ctgatggtaa
     6301 acgggtgaaa gaatttcgag ttagcgatca gcgacagcaa caggtgaatg gaattgctaa
     6361 tggtgtttac ttgcttacag caccgggatt gtaggccttt aaagttgttg tcgccggaag
     6421 tacggaatga ttgtttgagt tgtgaggttt gaggtttgag gtttgaagta taataagcga
     6481 tctcaattga atatttactg cgacagctgt cggaaaat
//
LOCUS       DASQJI010000444         8171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_206396,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000444 DASQJI010000000
VERSION     DASQJI010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8171
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206396"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            743..3703
                     /locus_tag="VEV83_12495"
     CDS             743..3703
                     /locus_tag="VEV83_12495"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HYK45986.1"
                     /translation="MAQEQPAAEEHQSESSPEQIEKLFPVVGIGASAGGLQALNELFE
                     NLPPDLGMAYVIVQHLSPSHDSILPELLAAKTKMPVKQVKNGLKINPDEVYVIPPNTF
                     ISIVDSKLKLSERIKTDGIHHSIDYFLNSLAPVYQTKAIAVILSGSGSDGTIGIQAVK
                     THGGITFAQDETATFSSMPKTASDSGYTDFVLPCKRIAEELASIAKLPSGILSLNEIV
                     EANMGELRKIQSLLHAKKGVDFGYYKQNTVNRRIMRRMALNKFNTLPEYVKFLREHTH
                     ELDLLYKDLLINVTSFFRDPNVYDALGKKILPALFKNRKENDTIRIWTPACANGEEAY
                     SVAICLFEFLQEKAIRTPIQIFGTDLNEAAIAKARSGVYNKGAMGNVSPERLKKYFIK
                     TDGHYQIIKPIRDVCIFATHNLLKDPPFSRMDLISCQNVLIYIESNPQKKILQAFHYS
                     LKPTGYLLLGKSETIGSSTELFAQLDKELKIYSRKATPPGTDVFDFSFHPGHMPANPA
                     HDKIDAVRLSDIDLEKETDRLLLSRYVPASVVVNSDLQILRFHGATSNYLQPSSGRAS
                     LHLLKMVKDELVFELKGLINRATKEGEAVKKDGVPLLQNGTDKMITIEVVPLKSPTKD
                     SYFLILFREAEAVASNGGGKTETTLKRADKDDRIRKLEQQINEAREYMKTMSEEFEAT
                     REELQSSNEEVLSSNEELQSMNEELETSKEELQSTNEELITINEELQQRNTELKEAGN
                     FARNIVDTINEPLLVLNDEMRIRSANNAFYKLFKTNIDRTEGNYLFELENGQWNLPEL
                     KEKLLQIIQKGKSFENCEITNSFPAIGEKTLLFNAMRMDREDKKAYVLLVIQDMTEKA
                     RAQRDLREREERFRLLLQNAFDITTVYSQDGNIMYQSEALEKTLGYPVKETLNKNIFE
                     LGIVHPDDMKRNKELMNEALNNPGKNIKGQLRLQHKNGGYKTMDVIFRNLLNNDNIKG
                     IIGNYQDVTNNIEV"
     gene            3836..5683
                     /locus_tag="VEV83_12500"
     CDS             3836..5683
                     /locus_tag="VEV83_12500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK45987.1"
                     /translation="MTTSNHIFPPTHGLLEYTHFGYMWTTVRTKRIVASHTVYALLEM
                     EPFSEFMNEEKWRTFVHPNDLYKLLQAEEKLMTEGTACSAEYRLVTKTGRHVHINHFM
                     QLSIGLDNEVKILSILDDITEQKHAEVMLEVMHEGFFELDSSFELKRVNAATEMLWRL
                     HRDDLIGKNIWNVFPEAVGTAFYEAITRAVHEKKNVVQNVIGPAEGHWLHISTTPFSD
                     GVFVIFYDIQNEKEAEQEALKHHNILKQAEELAGAGSWEYDVATKQFTWSENFSKLFG
                     LSEGATITPGIYVEAASPAFKEAAQRLVDRIEKNFAAFEELLEVEIKGEPRFFFVKTM
                     LFDHENSSPSKVLGLNMDVTTLHRSRQAITELNEALLEKNRALNTAISELKAFNSLAA
                     TDYKETLRHLYTSLEFIVVNDARNLSNPSRANIRRAQSAIQRMKLITEDIISYSQLNA
                     ATEPAVDVELNDILKLVQRDMKVKIEDASATITCGNCPTIHGHPQLLVLLFHHLVDNA
                     LKFRKKDSAPEIHLTARQLAGSSIDHPDAMPGKDYHAISVADNGIGINTGDTEKMFTM
                     FGKLHDGKEYKGSGIGLAVCKKIMDLHNGFITVESELAKGTVFTCYFPT"
     gene            complement(5924..6397)
                     /locus_tag="VEV83_12505"
     CDS             complement(5924..6397)
                     /locus_tag="VEV83_12505"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45988.1"
                     /translation="MTALIFLAITIIDYNNKAMRKKNILLIDDDDDELEIFTAALEDL
                     KISYNCSLARNAQQALVMLDNSVPDLIFLDVNMPGKGGIKCLEDIRERDALKKVPVII
                     YTTCHDEYGGKNAMMSGAAAYVRKPSSIKALTGILKQVFDHYSVLDPYPVFHVYE"
     gene            complement(6718..7122)
                     /locus_tag="VEV83_12510"
     CDS             complement(6718..7122)
                     /locus_tag="VEV83_12510"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK45989.1"
                     /translation="MWRKKSILLIDENSDELRLFVAALNELGIAYNCTYARNAEQGLK
                     ILAGIIPDFIFLDMGVSAGVECLAQIRRLNKLLDVPVIIYAKHVSDETRKSALKMGSV
                     VFVRKTSNLKALAETLQMILTPTQKEIQLLYS"
     gene            complement(7452..7709)
                     /locus_tag="VEV83_12515"
     CDS             complement(7452..7709)
                     /locus_tag="VEV83_12515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45990.1"
                     /translation="MLNADAIPLACLRTILFTYIDVSGSIMCTVKLRKHYERLNINDL
                     ESGQFPTITGNKTDRLLARISSIALPALFVLAWTVMWIAEG"
BASE COUNT         2491 a         1785 c         1785 g         2110 t
ORIGIN      
        1 ccttgaaaaa ttaattttga taatcgcttc ccgaaacctt tacctttacg ccacgcttca
       61 gccgtatata cataattttc cgcgacaata accggtttca ttcgtgtgaa caatgtacgt
      121 tgtgactggg cagagtttgg acaatagtct tcttcgcact cagggttgta tttcacacta
      181 aaaaactaat ccacttttca gagaagaaat aaggagggaa ttacaaaaac acgggcattg
      241 cgcacacggt tgctcgctta gttgcattaa aataaatggg ctgcttccgc tttcctcatc
      301 tgcttgccat gatgtggacg cagagcagcc cgactatttt gcacctgccg cttgagttgt
      361 ttttgccact ggcacgtatg gcgcacagtt tttgtgtgta gacagatgtg aagaatacct
      421 ttccgctgaa ctttcggctg aaggacaata catgtgttac ggtttcaatt gtttcaaaga
      481 acagttatga ctttgatata ttactgccca acggctcccg ccgcaccttt aggtggcgtt
      541 ccgactgtcc ccataccctc ttcaacaggc ttggtaaggt tgatgagatg atgaaggaaa
      601 ccgtagaata ttttctaaga aaattgccca aaagataaac caggggccaa aattttaacc
      661 agttgccggc tgccagaata attttagtaa ctgaataagg taaaaaatat ttgtacctta
      721 cttcattcaa aaatgtaata cgttggcaca agaacaaccg gcggcagaag aacaccaatc
      781 tgaatcatcc ccggaacaaa tagaaaaact ttttcccgtt gttggcatag gcgcgtctgc
      841 aggcggcctg caggcattga atgaattatt tgaaaacctg ccacccgacc tgggaatggc
      901 ctatgttatc gttcagcatc tttcgccaag ccacgacagc atcctgccgg agctgcttgc
      961 tgccaaaacg aaaatgccgg tgaagcaggt taagaacggc ctgaagataa accccgatga
     1021 ggtctatgtt atcccgccaa acacatttat cagtattgtt gacagcaagc tgaaactttc
     1081 tgaacgcata aaaactgatg gcattcacca ttccattgat tattttttaa attcactggc
     1141 cccggtctac cagacaaaag cgattgcagt gatactttcc ggcagcggca gcgacggtac
     1201 gatcggcata caggccgtaa aaacacacgg aggaattacg tttgcccagg atgagaccgc
     1261 gactttttca agcatgccaa agaccgcatc cgattcgggt tatacggatt tcgtgcttcc
     1321 ctgcaaacgg atagcagaag aacttgcaag catagccaaa ttgccttcag gtattttatc
     1381 attaaatgag atcgtggagg ctaacatggg cgaactgagg aaaatccaaa gcctgctcca
     1441 cgccaagaaa ggcgttgatt tcggctacta taaacaaaac actgtcaaca ggcgcatcat
     1501 gcggcgcatg gcattgaata agttcaacac tcttcccgaa tacgtaaaat ttctgcggga
     1561 acatacacat gagctggacc tactgtacaa agacctgctg ataaatgtta cgagtttttt
     1621 ccgcgatccg aacgtgtacg atgcgctcgg caaaaaaata ttgccggcgt tatttaaaaa
     1681 tcgaaaggaa aacgacacga taagaatatg gacacccgcc tgcgcgaacg gtgaagaagc
     1741 gtactcagtg gcaatctgcc tctttgaatt tttgcaggaa aaagctattc gcacgccgat
     1801 ccaaatattt ggaaccgacc tgaatgaagc cgccatcgct aaggcgcgca gcggcgttta
     1861 caataagggc gcaatgggaa acgtttcgcc cgaacggtta aaaaaatatt ttatcaaaac
     1921 cgatggccac taccagatca taaaacccat tcgcgacgta tgcatttttg ccacgcacaa
     1981 tttattgaaa gacccgccgt tcagccgcat ggacctgatc agttgccaga acgtgcttat
     2041 atatattgaa agcaatccgc agaaaaaaat attgcaggct tttcattatt cgctcaaacc
     2101 gacagggtac ctgttactcg gcaaatcaga aacgattggc agctccacag agctgtttgc
     2161 acagttagat aaggagttga aaatttattc gcggaaagca acacctccgg gtactgatgt
     2221 ttttgacttt tcatttcacc ccggtcacat gccagctaat ccagcgcatg ataaaatcga
     2281 tgcggttcgt ctttctgata tagatcttga aaaagaaact gaccggctgc ttctttcacg
     2341 ctacgtgcct gcgagtgtgg tcgtgaatag cgacctgcaa atacttcgct tccacggcgc
     2401 cacgtccaat tatttgcagc cttcatccgg cagggcgagc ctgcatttat taaaaatggt
     2461 gaaagatgaa ctggtgtttg aattgaaagg cctcatcaat cgtgcaacaa aagaaggcga
     2521 ggcggtaaaa aaagatggtg tgcctctttt acaaaatggc accgacaaga tgatcacgat
     2581 tgaagtagtg cctttgaaat cgccaacaaa ggattcttat tttttgatac tgttcaggga
     2641 agcggaagcc gtggcttcca acggcggcgg aaaaaccgaa acaacgctta aaagggctga
     2701 taaagatgat cgtatccgta agttagagca gcagatcaac gaagcaaggg agtatatgaa
     2761 aacgatgagc gaagaattcg aagctacgcg ggaagaactg caaagctcaa atgaagaagt
     2821 actgtcatcc aacgaagagc tgcaaagcat gaatgaagag ctggagacca gcaaagaaga
     2881 actgcaaagc acgaatgaag agctgataac gataaacgaa gagcttcagc agcgaaacac
     2941 agagttaaaa gaagcgggaa atttcgcacg caatattgtg gacacaatta atgagccttt
     3001 gcttgtgttg aacgacgaaa tgcgcatccg ctctgctaac aatgcttttt ataaattatt
     3061 caaaacaaat attgaccgca ctgagggcaa ttatttattt gagctcgaaa acggccagtg
     3121 gaatctgccg gaattaaaag aaaaactatt gcagatcata caaaaaggaa agagctttga
     3181 aaattgtgag atcacaaatt cttttccggc gataggcgaa aagacgcttt tgtttaacgc
     3241 gatgcggatg gaccgggaag ataaaaaagc ctatgtgctg ctcgtaatac aggatatgac
     3301 agaaaaagcg agagcacaac gcgaccttag agaacgggaa gaaagattcc ggctgctgct
     3361 gcaaaacgca tttgatataa cgacggtcta ttcgcaggat ggaaacatca tgtatcaaag
     3421 cgaagcgctg gaaaaaacgc ttggttatcc tgtaaaagaa acgctgaata aaaatatttt
     3481 tgaactcggc attgtgcatc cggatgatat gaagaggaat aaggaactga tgaatgaagc
     3541 gctgaataat cccgggaaaa acatcaaagg gcagttaaga cttcagcaca agaatggcgg
     3601 gtacaaaacc atggacgtta tctttcgaaa tttattaaac aatgacaata taaaagggat
     3661 cattggcaac taccaggacg ttacaaataa tatcgaggtt tagatagttt ccgttacctt
     3721 taactatcct tcaatcatta cccatggatg aaagacttta tcgcacattc ccattaaagg
     3781 tgcgttcaaa aaacaaactt attggcgaaa acattcatat tactaattcg ttcaagtgac
     3841 aacgagtaac catattttcc cgcccaccca tggtttactg gaatatacgc atttcgggta
     3901 tatgtggacc acggtcagaa caaaaagaat agtggcttcg cataccgtat atgccctgct
     3961 ggagatggaa ccattttcgg agtttatgaa tgaagaaaag tggcgaacgt ttgtgcatcc
     4021 gaacgacttg tataaactgt tgcaggccga agaaaaattg atgactgaag gaacagcatg
     4081 ttcagcagaa taccggctcg tgaccaaaac cggcaggcat gttcatatca accacttcat
     4141 gcagttgtcg attggcctcg ataacgaagt aaagatattg agcatactgg atgacataac
     4201 cgagcagaag cacgccgaag tgatgctcga agtaatgcat gaagggtttt ttgagctgga
     4261 ttcaagcttc gagttgaagc gcgtaaatgc cgcgaccgaa atgttatggc gtttgcaccg
     4321 cgatgatctc attggcaaaa atatctggaa cgtgtttccc gaagcggtag gcaccgcgtt
     4381 ctatgaggcg atcacgaggg ccgttcatga gaaaaaaaat gttgtgcaga atgttatagg
     4441 gccggctgaa ggccattggc tgcacatttc tacgaccccg ttttctgacg gcgtgttcgt
     4501 aatattctac gatatccaaa atgaaaaaga agctgaacaa gaggccttaa aacatcacaa
     4561 catactaaag caggcggaag agctcgccgg cgccggaagc tgggagtatg acgtcgcgac
     4621 caaacaattt acatggagtg aaaacttttc gaaattattt ggattgagcg aaggcgctac
     4681 aataactccc ggcatttacg tggaggctgc atcgccggca ttcaaagagg cggcgcaacg
     4741 gcttgttgac aggatagaaa aaaattttgc ggcgtttgaa gaattgctcg aggtagaaat
     4801 taaaggcgaa ccaaggttct tttttgtaaa gacgatgctg ttcgatcatg aaaacagctc
     4861 accttctaaa gtgcttggtt taaatatgga tgttaccacg cttcatcgct cccggcaggc
     4921 catcaccgaa ttaaacgaag cgctgcttga aaagaaccgc gctttgaata cggccatctc
     4981 ggagctgaaa gcttttaatt cgcttgccgc aaccgattat aaagaaacac tgcggcattt
     5041 atacaccagc cttgaattca ttgtcgtaaa cgacgcgcgc aatttgagca atccgtcgcg
     5101 ggccaatata cgcagggccc agtcagccat tcagagaatg aagctgatca cagaagatat
     5161 tatttcttat tcgcagttaa acgcggcaac ggaacctgcg gttgacgttg aattgaatga
     5221 catactaaaa ttggttcaac gcgatatgaa ggttaaaata gaagacgcat ccgcaaccat
     5281 tacatgtgga aattgcccca cgattcatgg acacccacaa ctgctcgtgc tactctttca
     5341 tcatttagtt gacaatgcgc tcaagttcag aaaaaaagac tcagctcctg aaattcacct
     5401 cacagcccgg cagctagccg gcagtagtat tgatcatccc gacgccatgc caggaaaaga
     5461 ttaccatgct atttctgtag cagataatgg catcgggatc aacaccggcg acacggaaaa
     5521 aatgttcacc atgtttggaa aactgcatga tggaaaagaa tataaagggt caggcattgg
     5581 tctcgcagtc tgcaaaaaga tcatggatct gcacaatgga tttatcacgg tggaaagcga
     5641 gctagcaaaa ggaactgtat tcacatgtta ttttcccaca taaacacttg cgcctttcgt
     5701 tactcgtaaa catgaaagag agctcatcta aaacggaaaa gtgagcaacg acgctgtttt
     5761 aaaatgcttg gcaggatttg attatgattt gtttttctta caatgccgca gcacgcaaaa
     5821 aataagagct gcccatttca agctgacagc tctttgttct ccaggggttg ttttcacaag
     5881 ttagcaacga tcaactgtct attcccgccc tcaatgccat tcgctactcg taaacatgaa
     5941 agacagggta cggatctaaa acggaataat gatcaaacac ctgttttaaa atacctgtta
     6001 acgctttgat gctggatggc ttccttacat acgctgcagc accggacatc atcgcatttt
     6061 taccgccata ctcatcgtgg caggttgtat aaatgatcac cggtaccttc ttcagcgcat
     6121 cccgctcccg aatatcctcc aaacacttga tgccgccttt cccgggcata tttacatcga
     6181 gaaagatcag gtcgggtacg gagttatcaa gcatcaccaa agcttgctgt gcatttcttg
     6241 ccaaactaca gttataagag atcttcaaat cttccaaagc cgccgtaaat atttccaact
     6301 catcatcgtc atcatcgatc agcaaaatat tttttttacg catcgcttta ttattgtagt
     6361 caataattgt aatggctaaa aaaataagag ctgtcactca aggaggacag ctctttgttc
     6421 tccaggggtt gttttcacaa gttagcaacg atcaactgtt tcttcccaat ctgaagacga
     6481 ctctttcacc gaccacggcg cgcgaaaatg cataccgaat tcgataagac ttactctggc
     6541 gcccttgatc tgctaaaaaa aacgtatgta gaagggaata tgtatcgaat aaactcccgg
     6601 ggtaacggag cggggtttaa ataacaaaag tacggcaata ctcacgccaa aagcaaacga
     6661 cttgaaattt ttttcttaaa tttttacgtt caaattacaa acggatctca aaccaattca
     6721 gctatacaac aactgaattt ctttttgggt tggggtcaat atcatttgca acgtttctgc
     6781 aagcgctttc aaattggatg tttttctcac gaagacaaca gaccccattt ttaaagcact
     6841 ctttcttgtt tcgtcactca catgttttgc ataaataatg accggtacat ccagtaactt
     6901 gtttagcctc ctgatctgcg ccaggcattc aacaccagca cttactccca tatcgaggaa
     6961 aataaaatcg gggattattc cggccaatat cttcaaccct tgttcagcat ttcttgcata
     7021 tgtacaatta taggcgatgc ccaattcatt cagggcagcg acgaaaagac gaagttcatc
     7081 actattctca tcgataagca aaatgctttt ctttctccac atacgcgcat ttgtgatagt
     7141 cgcaaaattt atgatacggt attctgaaag ccccttttta ttaattgttt gccggcggcg
     7201 acctccgatg attgtgcctg ctggtctttg ttttaagaac cgcaaaatat ctatctgcat
     7261 cagcggaatt cgattacaag caaattcctg tcaaactcta cctaaaatat ttctgttgaa
     7321 aatggcctgg gcgatggtgg ggctatgtat gaacaagacc ctgagcgggt ttcgtagacc
     7381 gaaattagct aatcagcatg ccgattccaa tttttttcgt tgaaatattt tttcacggat
     7441 cgattgatgc gttaaccttc tgctatccac atgacggtcc acgccaatac aaaaagcgca
     7501 ggcaaagcaa tggacgagat cctggcaagc agccggtcgg ttttattgcc ggttatcgtg
     7561 ggaaattgtc cgctttccag gtcgttaatg ttcagccttt cataatgctt tcgaagtttt
     7621 acagtgcaca tgatcgatcc gctaacatca atgtatgtaa agagaatggt gcgcaaacaa
     7681 gccagcggga tagcatcagc attaagcaat agatcgtctc ttttcctttg ggaggttgcg
     7741 cagtgatcag cattaaaaaa gcattactaa aaagaatggg ataatatcaa ccaaaaaatt
     7801 tttggtttaa tgtattatgt tgctgatcga tctggttgtg tataacagtg tagtggctcg
     7861 aagccggcga gtcgtgtttt tcgttttgca taggttagca tttgcattag cgtttttaaa
     7921 aaaatgccag caaccgctat taaaaaaaat aacttcttgg ctcgcttatg ttagttcgcg
     7981 tttgcaaaca atccgctggc tccgggcgat tgcaagagca caatttcaag cacagtgttt
     8041 tcatttttgt gtcggtgttc ccacaattta tttgtacgct ttttgtaatc agaacgtaaa
     8101 ccgttaacct atgtcaaacg caaatggcaa ctcttgcccc gttcctgttg gcacgcttgt
     8161 tattattgga g
//
LOCUS       DASQJI010000445         6412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2510284,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000445 DASQJI010000000
VERSION     DASQJI010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6412
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2510284"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            458..3562
                     /locus_tag="VEV83_12520"
     CDS             458..3562
                     /locus_tag="VEV83_12520"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HYK45991.1"
                     /translation="MHYSSTQQTQRSFMNATLEVANGITKKKNAVLYSILSIVAALFF
                     PSLQAQDVLVGLTSNGGPEGKGTMFSMKTTGANFSILKGFADWGTLPSGDLLLSSDGN
                     FYGMTNTGGTYIYCGAIFKMTPQGDITILHQLNGTPDGQYPFGELIKGADGDFYGLTS
                     SGGANSYGTIFKITPAGDFTVLKSFAVTADGGNPRGHLTLAKDGNFYGITYSGGAGGA
                     GTIFQYTPSGSYNVIHSFNKATEGGNSWSSLTEGKDGSLYGVTYGGGTNNAGTIFKIT
                     TGGQFTVLRQMNAATDGSSCQSDLIQASDGNFYGTCYGGGANSNGTIFRISSGGNFSV
                     VRALAWMTDGSNPFAGLVQHTDGNLYGTTTGGGANSKGVFFRLALNGTYTVLHSFASA
                     TEGANIKGALVQGNDGYLYGMASEGGSLNGGTAFKIKTDGSVTLLTNFNGASLGNIPY
                     ESLIKGRDSAYYGTTSAGGAYASGTVFKLCGGVASVLHSFNKNTDGAIPKGSLVMASD
                     SNFYGMTTTGGPKAYGTIFKITPNGNFSVVYNFNPATDGGAPQGSLVQGTDGSLYGMC
                     SSAGPNNTGTIFKISLGGSFTLLHSFVAASEGANPEGNLVQGTDGYFYGLTSNNSRAF
                     KIAYDGTGFAVLHTFLPSTEGNTGLGSLVQAVDGNFYGTMSTGGTYGGGTVFKMLPAG
                     GITVLKHFNQTPDGKYPKGNLLQASDGAFYGMTNIGGTNNIGTIFRITSGGNFSVLRH
                     LSMATDGGNPFGSLILAPVNNLVANAQSVSTPEDVKKKITLTGSGGSPLVFNISSKPK
                     HGKLTGTGAIVTYAPNKNYNGSDQFSFTVSVGCMTSAPAVVTINITPVADSPVLAPIG
                     NKTVIKNSTLTFTATATDVDKGQTLTYSLINAPAGASINATTGAFTWTPLAAGNFTFK
                     VRVTDNDNPPLYDEEQITVTVTNSFTSITNGQQDNASAQSLRATMYPNPVNDKFYLSL
                     PTVSGALNLKIINVSGALISDMSYDAPGKNTLEVNASQLTAGMYILQLQMNKQTQTFK
                     FIKN"
     gene            3678..4730
                     /gene="mgrA"
                     /locus_tag="VEV83_12525"
     CDS             3678..4730
                     /gene="mgrA"
                     /locus_tag="VEV83_12525"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047834 - D-threo-aldose 1-dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HYK45992.1"
                     /translation="MPYTPNSRRYSSMEYRRCGRSGLKLPVISFGLWHNFGEMDPLDN
                     CRAILRTAFDNGITHFDLANNYGQPAGSAEENFGKILEKDFRNYRDELIISTKAGWKM
                     WDGPYGDWGSKKYLVASLDQSLKRMGLEYVDIFYHHRPDPETPMEETMSTLDLIVRQG
                     KALYAGVSSYSAEETRKASDILDELGTPCVIHQPKYSMFVRWIEDGLLDVLEEKGIGC
                     ITFSSLAQGLLTNKYLKGIPADSRAARHLGNGAMEEDAITDDSVRKVQELNKLADERG
                     QSLAQMALAWVLKDPRITSVILGASRPEQITDALRCLNNYRFSAEELQRIENILSEDS
                     ATSVSEADAVDDAGRA"
     gene            4970..>6412
                     /locus_tag="VEV83_12530"
     CDS             4970..>6412
                     /locus_tag="VEV83_12530"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HYK45993.1"
                     /translation="MKVLRLPWLILTASFFLSNNSFCQQTHILSGKITGKDGEALGGV
                     SVSVKGNRNEAVVAGDDGTFLIRVIETSGILVFSDVGYENKEIAFNEQTTSFNVELNE
                     SVSVLNEVVLTGYLTQKKSDITGAISSVRYKEFKDQPVTNVAQSIQGKVSGILVSTPS
                     GTPGAGLLVSVRGANNPLYVVDGVPMISESNSSLSTSYNTDGEVMGAGQNISSISDIN
                     PDDIESIEILKDASSASIYGARAANGVVLITTKRGKSGRTDFSFNSFTGVQNVSRNIP
                     FLSSTELVNLIEDARAQDLRLYNEDPDLFPSDFDTRLLTKPLPDSWYTGVNTDWMNEI
                     FRTAPITNVQLSARGGNDKTKFFVAGNYFDQQGIVIENFYKRGSFRMNLDNKVSDRVS
                     IGANMSFTYSRNRRSFNDDTYTGIVTNAIGASPLEPVYEDGTYSDYTLYQASWLSDNP
                     VKSAKEIVAYTSSYRFIGSAFANIDIMKDLQ"
BASE COUNT         1850 a         1398 c         1524 g         1640 t
ORIGIN      
        1 gttgcgagcc agatatatcc tttatcgtct tgtgtgatcc cgtttacaat atttgttacg
       61 agtccattgc ttgtactgaa atgtgtgaac acatattggt ttgcctgttg cgggaaatct
      121 tttatactga tgcaggcgca accaaaacag agaaacaaat ccttcagcaa agtgttggtt
      181 tgagtacact caaatataac tcagttgtct gaatgatcga ccgttcttac tgtcctctgt
      241 catcagtcat ctgtcaactt tttcatagca agatcacaga tgaccgttga caattgaccg
      301 ttgagggtcg tacagcaatt tcttttctca attcatttta ctttttagtc agttcatacg
      361 catcgctatt gacaacggtg gcaaatgatg caaactttac ggtcatatta gatcacagca
      421 aaaaagatca tttcaaaact ttataaaacc aaatgttatg cactactcat ctactcagca
      481 aacgcaaaga agctttatga atgcaaccct tgaagttgca aacggcatca ctaagaaaaa
      541 gaacgcggtc ctctattcca tcttgtcaat agtggctgct ttgttttttc cttcgttaca
      601 ggcacaggat gttttggtcg gattaacttc caacggcgga cccgaaggaa aagggacaat
      661 gttttcaatg aaaacaacgg gcgcaaattt ttctatcctg aaaggttttg cggattgggg
      721 aacgttacca agcggcgact tgttattgag tagcgacggc aatttttatg ggatgacaaa
      781 cactggtggc acttacattt attgtggtgc gattttcaaa atgacgccgc agggagacat
      841 caccatactt caccaattga acggcacacc ggatggccaa tatccgtttg gcgaacttat
      901 caaaggggct gacggagatt tttatggcct tacaagcagc ggtggcgcga atagttatgg
      961 gactattttt aagataacac cggcggggga tttcactgtg cttaaaagtt ttgctgttac
     1021 ggcggatggc ggcaacccgc gcggacatct tacattggcg aaagacggta atttttatgg
     1081 cattacttat tccggcggcg ccggaggggc cggcaccatc tttcaataca caccatccgg
     1141 aagttataac gtgatccact catttaataa agctactgag ggcggtaatt cctggagcag
     1201 ccttactgaa ggaaaggatg gcagcctgta tggtgtaaca tacggtggtg gtacaaataa
     1261 cgcgggaact atttttaaga tcacgacagg cggccagttt actgttcttc gtcagatgaa
     1321 tgccgcaacc gatggttcga gctgccaaag cgaccttata caggccagcg acggcaattt
     1381 ttatggtacc tgctatggcg gtggcgcgaa cagcaacggt acaatcttta gaataagctc
     1441 gggaggtaac ttttcagtgg tgcgcgcgct cgcgtggatg accgacggat caaatccctt
     1501 tgccggcctg gtgcaacata ctgacggcaa tttgtatggc actaccaccg gcggcggagc
     1561 aaacagcaaa ggtgtgttct tcaggttggc gttaaatggt acatacactg ttctgcattc
     1621 tttcgcctca gcaacagaag gcgcaaacat aaaaggggcg ctcgtgcaag gcaacgatgg
     1681 ctacctctac ggtatggcaa gcgaaggtgg aagcctgaac ggcggcactg catttaagat
     1741 caagacagac ggttctgtaa cgctccttac aaattttaac ggcgcatctc ttggtaacat
     1801 tccttacgaa tcgctgatca agggacgtga tagcgcgtac tacggcacaa cgagtgccgg
     1861 cggagcgtat gcatcaggaa ccgttttcaa attgtgcggt ggcgttgctt ctgtcctgca
     1921 ttcattcaat aagaatacgg atggtgcaat tccaaagggg agcctggtaa tggcaagtga
     1981 cagtaatttc tatgggatga cgacgacagg cggacccaaa gcatatggta cgattttcaa
     2041 aataacaccg aatggaaact tttcagtggt ttataacttc aatcccgcta ctgatggagg
     2101 tgctccgcaa ggaagcctcg tgcagggaac ggatggcagc ttatatggaa tgtgtagctc
     2161 agccggcccg aacaacaccg gcacaatctt taaaatatca ctcggcggct cattcacatt
     2221 attacacagt tttgtcgccg cgtccgaagg agcaaatccg gaagggaatt tagtacaagg
     2281 cacggacgga tatttttatg gactcaccag caacaacagc cgtgcattta aaatagcata
     2341 cgacggcaca ggattcgcgg tgctgcatac ttttcttcca agcacggaag gaaacacagg
     2401 gctcggaagc ctggtccagg cagtggacgg aaatttttat ggcactatga gcaccggtgg
     2461 aacgtatgga ggcggaactg tgttcaaaat gcttccagcc ggaggaataa ccgtgttgaa
     2521 acattttaat caaacacctg atggaaaata ccccaaaggc aatttgttac aggcaagcga
     2581 cggtgctttc tacggcatga ctaatattgg cggaactaac aacatcggaa caattttcag
     2641 gataacatcc ggtggtaatt ttagcgtgtt gcggcattta tcaatggcaa ccgacggcgg
     2701 caatccgttt ggaagcctca tcctcgcgcc ggtaaataac ctcgttgcaa acgcgcagag
     2761 tgtatctaca ccagaagacg tcaaaaagaa aattactttg actggttcag gtggttcacc
     2821 attagtgttt aatatcagca gcaagccgaa gcacggtaag ctaacgggta ccggggcgat
     2881 cgttacgtac gcacctaata aaaattataa cggttcagat cagttcagct ttaccgtaag
     2941 cgttggttgt atgacgtcag caccggcagt agtaacgatc aatattacgc ctgttgccga
     3001 tagcccggtg cttgcaccga tcgggaataa aaccgtgata aaaaattcaa cacttacttt
     3061 cacagcaacc gcaaccgatg ttgacaaagg tcaaacgctc acgtattcac tcataaatgc
     3121 acccgccggt gcaagcatta atgcaacaac aggcgcattt acctggacgc cacttgctgc
     3181 aggaaacttt acctttaaag taagggttac ggataatgac aatccaccgt tgtatgatga
     3241 agagcagatc acagttacgg tgacgaattc attcacttca ataacaaacg ggcaacaaga
     3301 caatgcatca gctcaaagtt tacgtgcgac catgtatcca aatccggtga atgataaatt
     3361 ttatctctca ctgcctaccg taagcggagc actgaattta aagatcatta acgtcagcgg
     3421 agccttgata agtgatatga gctacgatgc gcctggtaag aacacacttg aagtaaacgc
     3481 atcgcaatta acagccggca tgtacatttt gcaattgcaa atgaataaac aaacacaaac
     3541 atttaagttt atcaagaatt gatcgtccaa tttaaatcgg cttaacttca aaaagcgaat
     3601 cgcagaacgg ttcgcttttt tgttattttt acgacgactc ttttcataaa atattttgac
     3661 ctgataaaaa aattagaatg ccttacacac caaattcccg ccgttacagt tcgatggaat
     3721 accgtcgttg cggacgcagc ggtctaaaac ttccggttat atcgtttggc ctctggcaca
     3781 acttcggcga gatggatcct ttagataatt gccgcgcgat cttgcgcacc gcatttgaca
     3841 acggcattac gcattttgat cttgcaaaca attatggcca accagccggc tccgcagaag
     3901 aaaattttgg aaagatcctt gaaaaggatt ttcgcaatta cagggatgaa cttatcattt
     3961 ctaccaaagc tggttggaaa atgtgggacg gcccgtacgg ggattgggga tcaaaaaaat
     4021 atcttgtcgc tagtcttgat caaagtttaa aacgaatggg ccttgaatat gtcgatattt
     4081 tttatcatca tcgtccggat ccggaaactc cgatggaaga aacgatgtcc acattggacc
     4141 tgatcgtgcg gcagggaaaa gcgctgtatg caggtgtgtc aagttactct gcagaggaaa
     4201 caagaaaagc atccgatatc ctggatgaat tgggcacacc ctgcgttatt catcaaccga
     4261 aatattccat gtttgttcgc tggatagaag atgggttact tgatgtgctc gaagaaaaag
     4321 gaattggatg tattacgttt tcatctttgg cacaaggact cttgacgaat aaatatctca
     4381 aaggaattcc agctgattcc agggccgcaa gacatttggg aaatggcgcg atggaagaag
     4441 acgcgataac tgacgacagc gttcgaaagg tgcaagaact aaacaagctg gcggatgagc
     4501 gcggacaaag cctcgcacaa atggcccttg catgggtatt aaaagatccg aggatcactt
     4561 ccgtaatact cggtgccagc aggcctgagc agatcacaga tgcccttcga tgtttgaaca
     4621 actatcgttt ttcagcggag gaactacaac ggatcgaaaa tatcctgagc gaggattcag
     4681 ccacttctgt ttctgaagca gatgctgttg atgatgcggg ccgcgcctag aaattgttac
     4741 tcgccacagt cgcaccccgc gtaatacccc ggattcttta tcaaccattt ttcctcgtcc
     4801 tgtggcccac aacttttttt tgtggattca cagcataccg ttacgaacaa aactataata
     4861 ttgtatcgct caggataatg gccgcaattg taatggatct tgatcgagac aataacatgc
     4921 gcacaacagt cctggccgaa ccgtttcaaa tttcttacaa acaatgctta tgaaagtttt
     4981 acgcttacca tggttaatac ttacggcaag tttcttcctt tcaaacaatt ccttttgcca
     5041 gcaaacgcat attttgtccg ggaagatcac aggcaaggat ggggaagcgc tgggcggggt
     5101 ctctgtttct gtaaagggga atcgaaatga agctgtggtg gctggcgatg atggaacttt
     5161 tttaattcgg gtaatcgaaa catccggtat acttgtgttt tcagacgtcg gatatgagaa
     5221 taaggaaatc gcatttaacg agcaaaccac ttccttcaat gttgaattaa atgaatcagt
     5281 gagtgtgctg aacgaagtgg tgctcacagg ttatcttact caaaagaaaa gcgatatcac
     5341 cggcgcgatc tcctcggtgc gatataaaga atttaaagat cagcctgtaa cgaatgtggc
     5401 gcaaagtatc cagggaaagg tctccggtat tttagtcagc acaccgtcgg gaactccggg
     5461 cgcaggtttg ctggtgagtg tgcgcggcgc aaataatcct ttgtatgttg tagacggcgt
     5521 gccgatgatc agcgaaagca actcgtcatt gtcaacttcg tacaatactg acggagaagt
     5581 gatgggggcg ggacagaaca tcagttcaat aagcgacatt aatccggatg atatagaatc
     5641 gatagaaatt ttaaaggacg catcttctgc atctatttac ggagcacgcg ctgcgaacgg
     5701 agtcgtgctt ataacaacga aacgaggaaa aagcgggagg acagatttca gcttcaacag
     5761 ttttaccggc gtgcaaaacg tttcgcgcaa catccccttc cttagcagca ccgaattggt
     5821 taatttaata gaagatgcga gggcgcagga tctcaggtta tacaacgaag atccggatct
     5881 ctttccctca gatttcgaca cgcgactgct cacaaaacca ttacctgatt catggtacac
     5941 cggcgtgaac accgactgga tgaatgagat atttcgcacg gcgccgatca cgaacgttca
     6001 gctttcagca cgtggcggaa atgataaaac gaaatttttt gttgcaggaa attatttcga
     6061 ccaacagggg atcgtgatcg aaaattttta taaacgcggc agtttcagaa tgaacctgga
     6121 caacaaggta agcgatcgtg tttcgattgg tgcgaatatg agctttacct attcacgaaa
     6181 caggagaagt tttaatgacg atacatatac gggtattgtg acaaatgcta tcggcgcttc
     6241 tccgctggaa cctgtttacg aagacggcac ctactcggat tacacattgt accaggcaag
     6301 ttggttgagt gataacccgg tgaaatctgc aaaagaaatt gttgcctaca catcgagtta
     6361 tcgtttcatc ggttctgcat ttgcgaatat cgatatcatg aaagatttgc aa
//
LOCUS       DASQJI010000446         7130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2050228,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000446 DASQJI010000000
VERSION     DASQJI010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7130
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2050228"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VEV83_12535"
     CDS             <1..360
                     /locus_tag="VEV83_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK45994.1"
                     /translation="TASIAGALTNNGLGVMVSSNGTQQKVVVYSATLSVTNLAPNSLL
                     GNVGHIGIAGGTFSGTPTAYIGNIITGTENGDYFRVVLIPDNVTSTGVDIKIFNPTAS
                     TISFSNVTWKVLVVGPK"
     gene            435..1553
                     /locus_tag="VEV83_12540"
     CDS             435..1553
                     /locus_tag="VEV83_12540"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK45995.1"
                     /translation="MQTKLLSLVATFFIATMSMSQGLKIGEGVVVNTTAGVNIVVQNG
                     SLTNNGTGDLSNSNLYMKGSTSGNIDGNTATTVNNLYLEKGTAILSLGNDLSVRNNVV
                     FQNGLLDLNGHNLLLYPAGLLVNESEANHVTGPLGGTVSITVDLNAPAGANPGNLGAI
                     ITCSKDMGRVTVHRGHNSQTNNSNGKSILRWYLIEPTNNSSLGATFRFTYLDGELNGL
                     DEGTLNLWKSTTGGLSWNKVTAAGSSTTLNFIDATVNSFVRYTLSSSGFSLTNSDQYV
                     SSEDSRVNDLNKSFSVTFVPNPVYLQGKVLINSGAAFNTELALFTSDGKKIMQQTLEL
                     HRGVNEATINTSALAAGFYYLVVEMQDGTTRKISFLKQ"
     gene            1715..2989
                     /locus_tag="VEV83_12545"
     CDS             1715..2989
                     /locus_tag="VEV83_12545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HYK45996.1"
                     /translation="MANITLKVNFKGGIIPPARLYNIMVAAGKSHLLYIRFGLRQQLL
                     FDVRTEEFENLTAELEKLGVTFQTSNAEYPNIMSSYPGAEVFIKNTWLTELIYRQVLD
                     SFSYKPTLKVNVSDSNQSFTPMLTGNINWVASPDETNYWHLFIRFPKTNVVYEWKDVV
                     NTRDLAAMSAYIEEIILGDRGSFYENDRADGDSLYERVSERSFDSKSAEAPLVLWPFN
                     LPYYEGLNHYDDKYWLGIYRRDELFSISFLKEVCLLCIKTGAQLCSTPWKTIIIKHIQ
                     PEHRADWNELLDKHQINLRHAANELNFQIDDNSFKALQLKHHLVKYLNDDDTRTFGVC
                     IGIKTRRKSEVFCSILVRRRPLLRIGKMGFFHVYDILCSKDYNPNERTDFIYSKDNPK
                     FVLSEQLRRAVLSYYDHHSKQPKEVAPVDAWD"
     gene            complement(3313..3849)
                     /locus_tag="VEV83_12550"
     CDS             complement(3313..3849)
                     /locus_tag="VEV83_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HYK45997.1"
                     /translation="MKTQNMNAGVADSNLKEFFLDQLQDIYWAEKKLVKTLPKLEDAA
                     TTQELRDAFSNHLEETRNHVARLEDVFGMIGEEVNATKCPAMAGIVDEGSDIIDETEE
                     GSAQRDVGLIFAGQKAEHYEIATYGGLIQLAKTLGYNDAANLMYQTLTEEKKADELLT
                     QIAERNVNYQASMEPHGV"
     gene            4070..5707
                     /locus_tag="VEV83_12555"
     CDS             4070..5707
                     /locus_tag="VEV83_12555"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK45998.1"
                     /translation="MKTAKLSALLLLVCLAWNCSEKKSTGSEQAAGLFDNMGHLNHPV
                     TTNSETAQKLFNQGMTLMYGFNHEEAVRSFEQALKNDSTMAMAWWGIAFCYGSNYNWP
                     ADMNATHKAYDAITKAQALSAHVSQKEKDYINTLAVRYTNDSTADLPALERKYSARMK
                     ALSEKYPDDLDAKTLYAESMMNLHPWELWTKDGQPNENTLDIVKALKEVLAIDSNHIG
                     ANHYLIHAMEASPHPEEALPSARRLATLVPNAGHLVHMPAHIYMRTGNYAGADHANDT
                     ARHVDSAYIAKNHVAGIYPMLYYTHNLHFLAIAQCFEGRYAAAKKSLDACEQQVPPDM
                     VKQMPMIQFLTAAPMQLIVGSENWEEALNHPKPDSSMNITVALWHWARGLAYLNKHDM
                     ANAAAEQKQFKQIAHSLPSDQTYGYTPVSVIATIADAIFSAKMSEQKKDLKAAENFYK
                     QAVVEEKKTHYDEPPDWFLPTSNMLGGFYLRNGKNAEAEAAFRDALKEFPNNGKALFG
                     LQEALKAQGKNDEAQKVKTDFDVAWKNADKPLSVQDL"
     gene            complement(5901..>7130)
                     /locus_tag="VEV83_12560"
     CDS             complement(5901..>7130)
                     /locus_tag="VEV83_12560"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYK45999.1"
                     /translation="LVLFEKWYGWYKGNDTVRGMDMLSSLSSGVTNVTKDVLGLSITI
                     LTYEWMVKHMAIYHVQSSFVTYFIAFMVLDFSGYWVHRIDHKVNFFWNSHIVHHSSEE
                     FNLACALRQSISVFVQLFTFLLIPAALLGVPADVIAIVAPIHLFAQFWYHTRHIKKMG
                     FLENIIVTPSHHRVHHAINPEYIDKNLSQIFIFWDKLFGTFQKELPELPPVYGITRPV
                     QTWNPIKINFQHLWLLTKDAWRANSLKDKLRIWFMPTGWRPADVAEKFPVYKIGDVYN
                     FEKYNPSSSRLLYIWSWVQTVILLLLISYLFGNIGKIGSPNIFIYGGFVFLYVYAYTD
                     LMDKNAQALASEFLKCAAGVWIIYYVGDWFGASQYLPWISALIVSYLVLSLAITSFFV
                     FVDFKKKAATLSTRIAA"
BASE COUNT         2110 a         1597 c         1549 g         1874 t
ORIGIN      
        1 actgcatcca ttgccggcgc tttgacgaat aacggactcg gcgtcatggt aagcagcaat
       61 ggaacacagc agaaagtggt tgtttatagt gcaacgttaa gtgtaactaa cctcgctcca
      121 aatagcttgt tgggaaatgt aggccacatt ggaattgctg gaggtacgtt ctctggcacg
      181 cccacagcgt acattggcaa tataattacc ggaactgaaa acggtgatta tttcagagta
      241 gttctaatcc cggacaatgt cactagtacg ggtgtagaca tcaaaatatt taatccaact
      301 gccagcacta tttctttcag caacgttaca tggaaagtgc ttgtcgttgg accgaagtga
      361 taaagcatac gatcagattt ttattgcaag aatgaattgc aatacttcat ttaaaaaatt
      421 acaaaactga tattatgcaa acaaaattat tatcactcgt cgccacattc ttcattgcta
      481 caatgagtat gtcgcaggga ttgaaaatag gtgagggcgt tgtcgtgaac actactgcgg
      541 gagtaaacat cgtagtgcag aatggaagcc tcaccaacaa tggtaccggc gacctttcaa
      601 acagcaatct ttatatgaaa ggtagcacct ccggcaatat tgacggcaat accgctacaa
      661 cggtaaacaa tctttatctc gaaaaaggca ccgccatttt atcgcttgga aatgatctaa
      721 gcgtcaggaa taatgttgtt ttccaaaatg gcctgctcga tctgaatggc cataatttat
      781 tattataccc ggccggttta cttgtaaatg aatcggaagc gaatcatgtt accggaccat
      841 taggaggtac ggtgtctatc accgtagacc tcaacgctcc ggcgggcgca aacccgggca
      901 atctcggcgc catcataacc tgctcaaaag acatggggcg ggttactgtg caccgtggcc
      961 ataattcaca aacaaacaat agtaacggta aaagcattct cagatggtac ctgattgaac
     1021 caacaaataa cagctcgctg ggtgcaacgt tcaggtttac ttatttggat ggagaattaa
     1081 atggcctcga cgagggtaca cttaatctgt ggaaaagtac gacaggaggc ctcagttgga
     1141 ataaggtaac cgctgccggg tcgagcacta cgctcaattt tatcgatgct acggttaatt
     1201 cttttgtgcg ttatacttta agctcatcgg gcttctctct aacgaacagt gatcaatatg
     1261 taagctctga ggattcgcgc gttaacgatc taaataaatc gttttctgtt acgttcgtgc
     1321 cgaatcctgt ctatttgcag ggaaaggtct tgataaacag tggcgctgcg tttaacaccg
     1381 agcttgcgct ttttacctct gatggcaaaa agatcatgca gcaaactttg gaattgcatc
     1441 ggggcgtaaa cgaggctacc ataaatacaa gcgccctggc ggccggtttc tattatttgg
     1501 tcgttgaaat gcaggacgga acaacaagaa agatttcgtt tctgaaacaa taatgcggct
     1561 taacagcaaa tgacttttat gtcggtatag acgccgggcg gggatggatg acaaacaaat
     1621 atgttgacga catttctgtg cgtaagtaat attttgttct cgcacaaaca tcgttatctt
     1681 agaaccgatc cttcacagaa atcgagcaag tcacatggca aacattacac ttaaagtcaa
     1741 ttttaagggc ggtatcattc ctcctgcccg gctctataac atcatggtgg cggctggcaa
     1801 atcgcacctg ctgtacatac gtttcgggct tcgccagcaa ctactttttg atgtgcgcac
     1861 agaagagttt gagaatctca ccgctgaact tgaaaagctc ggcgtgacat ttcagacgag
     1921 caacgctgaa tatcccaaca taatgagttc gtaccctgga gctgaggtgt tcatcaaaaa
     1981 cacctggctc actgagctca tttatagaca ggtgcttgat tctttctctt acaaacccac
     2041 gttgaaggtg aacgtgagcg acagcaatca aagcttcaca cccatgctca ccggcaacat
     2101 caattgggta gcatcgccgg acgagacgaa ctactggcat ttgtttattc gttttccaaa
     2161 aacgaatgtg gtttacgagt ggaaagatgt agtgaataca agagatctcg cggcaatgtc
     2221 ggcgtatatt gaagagatca tacttggtga ccgcggaagt ttttatgaga acgaccgcgc
     2281 tgatggtgac agtctctatg aacgggtcag tgaacgatcg tttgattcaa agtctgccga
     2341 agcaccgctt gtgttatggc cttttaatct tccctattac gaagggctta accattacga
     2401 cgataaatac tggttgggca tttacaggcg cgatgaatta ttcagcatta gttttttgaa
     2461 agaggtttgc ctcctttgca tcaagaccgg cgcacaactg tgttcaacgc catggaaaac
     2521 gatcatcatc aaacacattc agccggagca cagggccgac tggaatgaac tgctcgataa
     2581 acaccagatc aatttgcggc acgcagccaa tgaactgaat ttccaaatag acgacaacag
     2641 ttttaaggca ctgcaactaa agcaccatct tgtgaaatat ttgaacgatg atgataccag
     2701 aacgtttggt gtttgcatcg ggattaagac aagaagaaag agcgaggtgt tctgcagcat
     2761 actggtccga cgcaggccat tgttgcgcat aggcaaaatg ggcttctttc acgtatacga
     2821 catcttatgc tcaaaagact ataaccccaa cgaacgtaca gattttatat acagcaaaga
     2881 caatccaaaa tttgtattgt ccgagcaact acgccgcgcg gtactttctt attacgacca
     2941 tcattcaaaa caaccaaaag aagttgcacc cgttgatgca tgggattagc atgcatgttt
     3001 tcggtgaaac atattcaacg cgctttcgga gctttcattc cctggtttaa tgatcttcca
     3061 caagcccggt gtagcatttc cccacgattg cgcgcctgga ttactttttt gccatgtgcc
     3121 gaacaaagga tccgctccaa cgagaaattg ttattcgtga cattgccggg cgatttcacc
     3181 tgcaaccaat ctgcaattga aataaatcga aaatgccggt cgtttaaaag accatctgta
     3241 tacacagaac aaaggttgcc ccgttgaggc aaccttatta aacataacat tgctgttatt
     3301 gttcataaaa aactaaactc catgaggctc catgctggcc tggtaattca catttctttc
     3361 tgcgatctgg gtaagtaatt cgtccgcctt cttttcttct gtcaatgttt gatacatcag
     3421 gtttgctgca tcgttatagc ccagcgtttt tgcgagctgt atcaaaccgc catacgttgc
     3481 aatttcataa tgctcggctt tctgcccggc aaaaatcaga cctacatctc tttgtgcaga
     3541 tccttcttca gtttcatcaa ttatatccga accttcatcc acaatccctg ccatggccgg
     3601 gcactttgtt gcattcactt cttctcctat catgccaaac acatcctcca gtcttgctac
     3661 atgatttctt gtttcctcca ggtgattcga aaatgcatct ctcaattcct gcgtggtcgc
     3721 tgcatcctca agctttggaa gtgttttcac taacttcttt tctgcccaat agatatcctg
     3781 caattgatcc aggaagaatt ctttcaaatt agaatccgcc acaccggcat tcatgttttg
     3841 tgttttcatg atcgttactt ttaaaatgat aaaaaaactt agccttgttt gtggccacaa
     3901 atagtgccac aaggtttttt ttcagcgcct acttttctaa atgaaggtta atctattttt
     3961 tcccggtaaa gaaaaattca aatcacaagg cagaacgtaa acattttctg ccagtcatgg
     4021 ccgcaagttg aatttctatt tttgttacct tccctaaaaa ttccgaacaa tgaaaacagc
     4081 aaaactttct gcattattgc tgttggtatg tttagcatgg aattgttcag agaaaaagag
     4141 tacaggatca gaacaggctg caggactttt cgacaatatg gggcatctta accaccccgt
     4201 aactaccaac agcgaaacag ctcaaaaatt atttaaccag gggatgaccc tcatgtacgg
     4261 cttcaatcat gaagaggctg tccgttcatt tgaacaagca ttaaaaaatg attccacgat
     4321 ggcaatggcc tggtggggca ttgcattttg ttacggctcc aactacaact ggccggctga
     4381 catgaatgcc acacataagg cttatgatgc gataacaaaa gcacaggcat tgagcgcaca
     4441 tgtgtctcaa aaggaaaaag attatatcaa cacattggcg gttcggtaca cgaatgatag
     4501 tactgcagat ctgcccgcac tggaaagaaa atacagcgcg aggatgaaag cattgagcga
     4561 aaaatatcct gacgatcttg atgctaaaac tttatatgca gagagcatga tgaatttgca
     4621 tccgtgggaa ttgtggacga aagatggcca gccaaacgag aatacgttag acatcgttaa
     4681 agcgcttaag gaagtgctcg ccattgactc caatcatatc ggggccaatc attatcttat
     4741 tcatgccatg gaagcatcgc ctcacccaga agaagctttg ccgagcgccc gacgactggc
     4801 tacgcttgtt cccaacgcag gccacctcgt gcacatgcct gcacacattt acatgcgcac
     4861 gggaaactat gcgggcgcag atcacgcgaa cgatacggca aggcacgtgg actcagctta
     4921 cattgctaaa aatcatgttg cgggtattta cccgatgttg tattataccc acaacctcca
     4981 ttttttggcc atcgctcaat gcttcgaagg aagatatgca gcggcgaaaa aatcacttga
     5041 cgcatgtgaa cagcaagttc cgcccgacat ggtgaagcaa atgccgatga tacaatttct
     5101 caccgcggcg cctatgcagc tcatcgtcgg ttctgaaaat tgggaggaag ctctcaacca
     5161 tccgaaaccg gattcgtcta tgaacatcac cgtcgccttg tggcattggg ctagaggact
     5221 tgcatatttg aacaagcacg atatggcgaa tgctgcggct gagcaaaagc agttcaaaca
     5281 aattgctcat tcgcttcctt ctgaccaaac ctatggatac acacctgtca gtgttattgc
     5341 cacaattgca gatgcgatct tctctgcaaa aatgagcgag cagaaaaaag acctgaaggc
     5401 agcggaaaat ttttataaac aagcagtcgt tgaggaaaag aaaacacact acgacgagcc
     5461 gcccgattgg tttttgccga caagcaacat gctcggcggc ttttatttgc gcaacggcaa
     5521 aaatgctgaa gcagaagctg cattccgcga cgcgttgaaa gaatttccta acaatggaaa
     5581 agcgctgttt ggcctgcagg aagcgctgaa ggcccaggga aaaaatgacg aagctcaaaa
     5641 ggtgaaaaca gatttcgatg tggcctggaa aaatgcggat aagccgctga gtgttcaaga
     5701 cctataagga tgtattggag tctcaatatc gttcaacgct gaacgctcaa taaacgatat
     5761 tcaataagtc aatattcaag tagacgtgac cggaatctgt caatataatt cgaaacagtt
     5821 tttcgtgata aattttgaac ttcgaacatt gacattgagc attgaaaatt gaagattgaa
     5881 aattctcttg gtatcaagtt tcaagctgca attctcgtcg atagcgttgc agctttcttt
     5941 ttaaaatcaa caaaaacaaa gaatgaggta atggccagcg ataaaaccag atacgagacg
     6001 atcaacgctg agatccacgg aagatactgc gacgcgccga accagtcgcc gacataataa
     6061 atgatccata ctccggctgc acattttaga aattcagatg cgagcgcctg tgcgtttttg
     6121 tccataaggt cggtatatgc gtatacatac aggaacacga aaccaccata aataaaaatg
     6181 tttgggctac ctattttccc gatgttcccg aaaagataac ttatcaatag caggagaata
     6241 acggtttgaa cccatgacca tatatataaa agtcttgacg aagaaggatt gtatttttca
     6301 aagttgtaga cgtccccgat cttgtaaaca ggaaattttt cagcgacgtc tgcaggtcgc
     6361 caaccagtgg gcataaacca gatgcgtagt ttatctttca aactgtttgc acgccacgca
     6421 tcttttgtca gcaaccacaa atgctgaaaa tttatcttga tcgggttcca cgtttgcaca
     6481 ggccgagtga ttccatatac cggcggaagc tcaggtaatt ctttttgaaa agtgccaaag
     6541 agtttgtccc agaaaataaa tatctgcgaa agatttttgt cgatgtactc cggattaatg
     6601 gcgtgatgaa cgcggtgatg cgaaggcgtt acaatgatgt tttcaaggaa tcccattttc
     6661 tttatgtgcc ttgtgtgata ccagaattgg gcaaataaat ggatcggcgc gacgatcgca
     6721 ataacatcag ccggcacacc gagtaaggca gcgggtatca acaggaatgt aaagagctga
     6781 acaaatacgg agatgctttg ccgcaatgcg catgcaagat tgaattcctc gctgctgtga
     6841 tgtacgatat ggctgttcca gaagaagttt actttatggt cgatgcgatg cacccagtaa
     6901 ccggaaaaat caagcaccat gaaggcgata aaataagtaa caaaagacga ctgcacatga
     6961 tagatcgcca tatgtttcac catccactca taggtgagta tcgtaatgct caggcccaaa
     7021 acatcctttg taacattcgt aactccactg ctcaggctgc tgagcatgtc cattccacgc
     7081 acggtatcgt ttcctttgta ccagccatac catttttcaa aaagcaccaa
//
LOCUS       DASQJI010000447         3312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1280191,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000447 DASQJI010000000
VERSION     DASQJI010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3312
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280191"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="VEV83_12565"
     CDS             complement(<1..713)
                     /locus_tag="VEV83_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46000.1"
                     /translation="MKLNYVVLVLLLPATVLAQQKDSFIVEGKDTTVIIDKGTFTLKE
                     VIVRNHLDYESLLRRIQNDTTFYKAFRNLHIVEFTSLNNIRMFDKRGNVQASYYSKTR
                     QHRENGCRSTESLEQKTTGDFLDSKGNFNYVTGEMYASIFLTKGNVCGEDNIVTGHTF
                     STQGKSGTEKHKEQLKMLFFNPGRKIPGIPLIGNKLDLYDEHAHRVYNYTLDYDTYRG
                     NYTYIFSIKPKEDLGLFQRG"
     gene            complement(710..1288)
                     /gene="def"
                     /locus_tag="VEV83_12570"
     CDS             complement(710..1288)
                     /gene="def"
                     /locus_tag="VEV83_12570"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HYK46001.1"
                     /translation="MILPIVAYGTPVLRAVAKDITPDYPNLEKLISDMWETLYASSGV
                     GLAAPQVNKDIRLFIIDSTQVFEHQEENEKGKYPDEPGRKQVFINAKLKHLDGEPWNY
                     NEGCLSIPKIREDIMRPETVTIEYVDENFMPHTETFNGLTARIIQHEYDHIEGKLFID
                     YIKPFRKKLLKGRLADISKGKIKVDYKMTFPK"
     gene            complement(1461..1877)
                     /gene="ruvX"
                     /locus_tag="VEV83_12575"
     CDS             complement(1461..1877)
                     /gene="ruvX"
                     /locus_tag="VEV83_12575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HYK46002.1"
                     /translation="MPRILCIDYGKKRTGIAVTDPLKIIAAPLMAIETPALMQFLKNY
                     FKDQEVELVLIGDPKNWDETDTHATPLVNQFVQRFKKEFPSKDIKMIDERYTSKLAVD
                     AMVAMGMKKKDRQKKENVDQIAATIMLQEYLNVPHS"
     gene            complement(1969..2910)
                     /locus_tag="VEV83_12580"
     CDS             complement(1969..2910)
                     /locus_tag="VEV83_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HYK46003.1"
                     /translation="MSSVRNYLSFVKFSHTIFAMPFALIGFFLGYNYFFKTYPSSAWW
                     GTVDQLPVGQQELIRNFTPGGFFTKFLLVLICMIAARSAAMGFNRYLDRHFDARNPRT
                     AIREIPNGIISPESALRFVILSCIVFVAATFFINNICFLLSPVALFVVLFYSYTKRFT
                     PLCHLVLGLGLSLAPIGAYLAVTGRFDILPLLFSFAVICWVSGFDIIYALQDVEFDQS
                     QKLYSIPASVGKSKALRVSELLHLLSTAFVIGAGIYGHFHWLYWLGIAVFVGMLLYQH
                     SIVKPNDLRRVNLAFMTANGIASVVFGAFVIADLFFT"
     gene            complement(2927..>3312)
                     /locus_tag="VEV83_12585"
     CDS             complement(2927..>3312)
                     /locus_tag="VEV83_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HYK46004.1"
                     /translation="YTPPPTHRSVHKTALGAVDTVDWMHFPNIEDAIAQLNENGYRVY
                     AIEQAEQSMKLEKFALPDGGKIAVIFGNEVEGVQNSVLKIADGCIEIPQHGMKHSLNV
                     SVAAGIVLWSLVDKGRKPPATTGEL"
BASE COUNT          879 a          737 c          739 g          957 t
ORIGIN      
        1 ccgcgttgaa aaagtccaag gtcctctttc ggcttgatcg aaaaaatgta tgtgtagttg
       61 ccgcggtatg tatcatagtc gagcgtgtag ttataaacgc gatgcgcatg ctcatcgtaa
      121 agatcaagct tatttccgat caatggaatt ccgggaattt ttctgccggg attaaagaac
      181 agcattttca attgttcttt gtgtttttca gtgccgctct tgccctgggt agaaaaagta
      241 tggccagtca ctatgttatc ttctccgcac acgttgccct ttgtgaggaa gatagaagca
      301 tacatttcgc ccgttacata attgaagttg cctttgctgt caagaaaatc gcctgtcgtt
      361 ttctgttcga gagattcggt tgaccggcac ccattctcac gatgttggcg ggtcttgcta
      421 taataacttg cctgcacgtt gcctctttta tcgaacatgc ggatattgtt gagcgacgta
      481 aactcaacta tgtggagatt gcgaaatgcc ttgtaaaagg ttgtatcgtt ttggatgcgc
      541 cgcagcaggc tttcataatc caggtgattg cgaacaatca cttcttttaa agtgaacgtt
      601 cctttgtcga taattaccgt tgtatctttt ccttctacga tgaaggagtc tttttgttga
      661 gcgagaacag ttgcgggcag caggagtaca agaaccacat aattcaactt cattttggaa
      721 aggtcatttt ataatccacc ttgatcttgc ctttgctgat gtctgcaagt ctacccttta
      781 atagtttctt tcggaatggc tttatgtagt cgatgaataa tttgccttcg atatgatcgt
      841 attcatgctg gatgatgcgg gcagtgaggc cattaaaagt ttctgtgtgc ggcatgaagt
      901 tttcatccac atattcgatc gtgacagtct caggccgcat aatatcttcg cgtattttgg
      961 gaatgctgag acagccttcg ttatagttcc acggctcgcc gtcaaggtgc ttcaatttgg
     1021 cattgataaa gacctgtttt cttccgggtt catctggata ttttcccttt tcattttctt
     1081 cctggtgttc gaagacctgg gtgctatcga tgatgaacaa ccggatatct ttgttcactt
     1141 gcggcgccgc gagcccgacg ccactgctcg cgtacagcgt ttcccacata tctgaaataa
     1201 gtttttcaag attcggataa tccggagtaa tgtcctttgc tacagctctc aatactggcg
     1261 ttccgtatgc aacaatgggt aatatcatgc gtccttgcaa ttcccgcagg ggaaattttt
     1321 tagcgttatt gatttaggcc gcgaagataa ttgttaggtt gttaagcagg aataaaaact
     1381 ggtgttgagg cgtttcgcac aaagactaaa aatgcgaacg agagaacttt taaacatgat
     1441 cgcgcagtag cagactccct tcaggagtgg ggcacattca aatactcctg caacatgatc
     1501 gttgctgcta tctggtcaac attttctttt ttttgccggt ctttcttttt catacccatg
     1561 gcaaccatgg catccacagc cagctttgat gtgtagcgct catcgatcat ttttatatcc
     1621 tttgatggga attctttttt aaatctttgc acgaactgat ttactaaagg cgtcgcgtgc
     1681 gtgtcggttt catcccagtt ctttgggtcg ccgatcaata ccagttcaac ttcctggtct
     1741 ttaaaataat ttttcaggaa ttgcatgagc gccggggtct cgatggccat caatggtgcg
     1801 gcgataattt ttaatggatc ggtgaccgcg ataccagtcc ttttttttcc ataatctatg
     1861 cagagaatac gcggcatcgt gagtgtgaat tgtgaatggt caattgtgaa tgctcaattt
     1921 agaacttgat gaataagtgt gaaatgctgc tttgggcaac gaaataattt acgtgaaaaa
     1981 caggtctgca ataacgaaag cgccgaaaac gacgctcgca attccatttg ctgtcatgaa
     2041 cgcgagattc actcgccgca ggtcatttgg tttcactatt gaatgctggt ataataacat
     2101 gccaacaaac actgcgatac ctaaccagta cagccagtga aaatgcccgt atatccctgc
     2161 gccgatcacg aatgcggtac tgagcagatg aagcagctcg gatacccgca atgctttcga
     2221 ttttccgaca cttgcaggaa tagaatatag tttttgcgac tgatcgaatt ccacatcctg
     2281 caaggcatag atgatatcga atccgctgac ccaacatatc accgcaaacg aaaaaagcaa
     2341 agggagaata tcaaagcggc cggtaacggc gaggtacgca ccgataggag cgagggataa
     2401 ccccaaaccc aaaaccaaat gacacaacgg cgtaaaacgt tttgtgtaac tgtagaacaa
     2461 gacaacgaag agtgcgaccg gcgataacaa gaagcaaatg ttattgataa agaatgtcgc
     2521 tgcgacaaaa acaatacagc tcagaattac aaacctcaaa gcactctccg gtgagataat
     2581 accatttggg atttcgcgaa tcgcagtgcg cggattcctg gcatcaaaat gacgatcaag
     2641 ataacggttg aagcccatcg ccgcgctgcg cgctgctatc atgcagatga gcactaacag
     2701 gaattttgta aaaaatcctc cgggtgtaaa atttctgatc aattcctgct gtccaaccgg
     2761 cagttgatca actgttcccc accacgcaga cgagggatat gttttaaaga aatagttgta
     2821 tcccaaaaag aatccaataa gggcaaacgg catggcaaaa attgtatggg aaaattttac
     2881 gaacgagaga taatttctta ctgaagacat ctgcaaattt agtgatttac aactccccgg
     2941 tagtggctgg cggcttccgg cccttgtcta ccaaactcca tagtacaatt cctgcagcaa
     3001 ccgacacgtt cagcgaatgc ttcattccat gttgcgggat ctctatacaa ccatctgcaa
     3061 ttttaagcac ggagttttga acaccttcca cttcgttgcc gaatataacc gcaatttttc
     3121 ccccatccgg cagcgcgaat ttttcgagtt tcatgctttg ttctgcttgc tctatggcat
     3181 acactcgata cccgttttcg tttagctggg cgatagcatc ttcgatgttt ggaaaatgca
     3241 tccaatcaac agtgtcaact gcacccaatg ctgttttgtg cacggaacgg tgtgtcgggg
     3301 gcggagtata cc
//
LOCUS       DASQJI010000448         4533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1280323,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000448 DASQJI010000000
VERSION     DASQJI010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4533
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280323"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /gene="eno"
                     /locus_tag="VEV83_12590"
     CDS             complement(<1..434)
                     /gene="eno"
                     /locus_tag="VEV83_12590"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585660.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HYK46005.1"
                     /translation="MSYIANIHARQILDSRGNPTVEVDVITEAGFLGRAAVPSGASTG
                     IHEAVELRDADEKVYSGKGVLKAVSNVNTSISDQLVGWSVDDQPGIDAKLIAIDGTDN
                     KSKLGANATLAVSMAAAKAAALESDLPLYRYLGGVNSTVLPMP"
     gene            complement(571..2694)
                     /gene="ligA"
                     /locus_tag="VEV83_12595"
     CDS             complement(571..2694)
                     /gene="ligA"
                     /locus_tag="VEV83_12595"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HYK46006.1"
                     /translation="MYSQQETHRLAKLTGSLSKKISAKDLETLRKILRFHEYRYYVLS
                     DPLISDFEYDQLYKRLEEIENEHPDLITADSPTRRVGNSLNTAFPTVQHLVPMLSLDN
                     SYNEEDLLDFDRKARAATGLTEIEYCIEPKFDGASISLTYENDLLVQGVTRGNGIEGE
                     EITTNIKQIRSIPLSAAFSEYNIQLAEIRGEVMMSKRSFSKYNQQMEEEGLPVLANPR
                     NAASGSLRIKDPKLVAKRSLEAFLYHVSYYTTLAGKKVSDEKDHSKENISPREAPFTT
                     HADSLKMLWDLGFRSPEKEKKVVKGINGVIKYCREYEVKRDDLPYEIDGMVIKVNDLA
                     LQDQLGMTSHHPRWAIAFKFKARQATTKLKGVEFNVGRTGAVTPVAKLDPVHISGVTV
                     TSISMHNEEYIKEKDLRIGDTVLVERAGDVIPQIVKSMPEFRNGSEQVIHYPKKCPVC
                     KSELFKEEGEAVWRCINIECPAQVVERIIHFVSKDAMDIKHFGAANVIKFYELGLLKD
                     IPGIYILDFEKIGQLEGFGKKSVENLQTAIEASKHQPLHRLIYALGIRYVGETTAKTL
                     ANAVSNVFDFAPMTIEDLQQLEDIGIKVATSIYGFFHNDDNLQILHRLESLGLNLKNT
                     KRQSSPKGALRDQTFLFTGSLAKLKRSEAEEMVEENGGKIVSSVSSKLNYLVVGEDAG
                     SKLEKAKKINTIKIISEDEFLLLIK"
     gene            2820..3569
                     /locus_tag="VEV83_12600"
     CDS             2820..3569
                     /locus_tag="VEV83_12600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HYK46007.1"
                     /translation="MVNEEITSVQLPDEPGHLITDVVALVDSYPRVPITVDCVIFGFD
                     NNELKVLLIRSDLEMYHGRWSLLGDFAHDDEELDDAAYRVLQERTGMDDVYLEQVRTF
                     SHPKRHPGGRVLTVAYCSLLNIEHHRLKILDNELHWHCIKSIRDMAFDHKTILDVCYA
                     WLQKRMLEHPLGLNLLPEKFSLRELQNLYEVILDIKLDRRNFRKKFFSMDFLIDTGEY
                     EDDVPHRPGRLYRFNYDKYEHNKRRWTGIDF"
     gene            complement(3577..>4533)
                     /locus_tag="VEV83_12605"
     CDS             complement(3577..>4533)
                     /locus_tag="VEV83_12605"
                     /inference="COORDINATES: protein motif:HMM:NF019365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015926 - glucosidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 53 family protein"
                     /protein_id="HYK46008.1"
                     /translation="ENPFPISKPAAKTVDKMLGADISFLPELESTGMKFFDKGVQKDA
                     IQILKDHGFNYIRLRIFVDPGNDSGYSPGKGFCDLEHTKQMARRVKDAGMKFLLDFHY
                     SDYWADPGKQFKPASWRNEDFTQLKKSVYDYTKMVMQQLKDQGTEPDMVQVGNEINHG
                     MIWPEGSIGNLDSLAQLIYAGINGVLVVAPSTIIMLHIALGGQNAEAHFFLDNMIARG
                     VPFDVIGLSYYPKWHGTLNDLRDNINELSRYYKKDLVVVEYSQYKREVNDIAFNVDGG
                     RGKGSCIWEPLNTWESIFDKNGNANNYLYDYDAISAQYIKNK"
BASE COUNT         1104 a         1055 c          953 g         1421 t
ORIGIN      
        1 ggcatgggaa gtactgtgct gtttacgccg ccgaggtaac ggtacaatgg caagtcgctt
       61 tcaagcgccg ctgctttcgc cgctgccatt gaaacagcaa gcgttgcatt agcgcctagc
      121 ttgcttttgt tatcggttcc atctattgca ataagctttg catctatgcc gggctgatca
      181 tccacgctcc atcccacaag ctggtcggag atagatgtgt tcacattcga aactgctttt
      241 aatacgcctt ttcctgaata gactttttca tcagcatcac gcaattcaac cgcttcatgt
      301 atgccggtag atgcaccact gggcacggcg gcgcgtccta aaaagccggc ttcagttatc
      361 acgtctactt ccaccgttgg attgccacgg ctatcgagaa tttgtcttgc atgaatgttt
      421 gcgatataac tcatatgtta tttgatgttt gatgtttgaa gtttgatgtc tgatctctga
      481 tctctgatct tatgtctgat gtcaattctt atttcttatt taatttccct tccaaattgc
      541 aaagaaacaa tcttccgcgg aaatggatta ttatttgatc agcaataaaa actcatcttc
      601 actaatgatc ttgatggtat ttatcttttt tgctttttcg agtttgctgc ccgcgtcttc
      661 accaacaacc aggtaattga gtttactgct tacactacta acgatctttc cgccattttc
      721 ttcaaccatt tcttccgctt cactcctttt gagttttgca aggctacctg taaacaaaaa
      781 agtttggtcg cgcagggcgc ctttaggtga agactggcgt ttcgtgtttt tcaaattcaa
      841 acccaaagat tcaaggcgat gcagaatttg aagattatca tcgttgtgaa aaaacccgta
      901 gatacttgtc gcgactttta tgccgatgtc ttcaagttgt tgcaaatctt caatggtcat
      961 cggggcaaag tcaaacacat tgcttactgc attggccaac gtttttgcgg ttgtttcacc
     1021 cacgtagcgg atcccaagtg cgtagatcag cctgtgcagc ggctggtgtt tggacgcttc
     1081 aatcgcagtt tgcaggtttt caacggattt ttttccaaag ccttccagtt gtccgatttt
     1141 ttcaaaatcc aatatgtaga taccgggaat atctttcaag agcccgagct cgtaaaactt
     1201 gatcacgttc gctgcgccga aatgttttat gtccatcgca tccttgctca cgaaatgaat
     1261 gatccgttca actacctgcg ccgggcattc aatgttgatg catcgccaca ccgcttcacc
     1321 ctcttcttta aaaagctcac ttttacacac cgggcatttc tttggataat gaatgacctg
     1381 ctcgcttccg tttctaaact ccggcattga tttcacaatt tgagggatca catctccggc
     1441 tctttccact aaaacagtgt caccgatgcg caagtctttt tctttgatat actcttcatt
     1501 gtgcattgaa atactcgtta ccgtaacgcc gcttatgtgt acagggtcca gcttcgcaac
     1561 gggtgttaca gccccggttc tgccaacatt aaattccact ccctttaatt ttgtagtagc
     1621 ctgtcgtgct ttaaacttga aagctatcgc ccaccgcgga tgatgagaag tcattcccaa
     1681 ttgatcctgc aacgccaggt catttacttt gatcaccatg ccatcgatct catagggcag
     1741 gtcgtctctc ttaacttcat attctcgaca atatttaata acgccgttga ttccctttac
     1801 aactttcttc tccttctcag ggctgcgaaa acccaggtcc cacagcatct tcaaagaatc
     1861 ggcgtgtgtt gtgaagggtg cttccctcgg tgaaatattt tcttttgaat ggtctttctc
     1921 gtcggaaact tttttgcccg ccaacgtggt ataataacta acgtgataaa gaaatgcttc
     1981 aaggctcctt tttgcaacga gcttcggatc ttttatccgg agacttccgc tggccgcatt
     2041 gcgggggttc gctaaaacag gaaggccttc ttcttccatt tgctgattgt atttactgaa
     2101 tgatcttttg ctcatcataa cctccccccg aatttcagcg agttgaatat tgtattcgga
     2161 gaatgcagcc gataaaggga tcgatcgaat ttgttttatg ttcgttgtta tctcttctcc
     2221 ttctatacca tttccgcgcg taacgccttg tacaaggaga tcattctcat acgtgagcga
     2281 tatgctcgcg ccgtcgaact ttggttcgat acaatattca atttctgtaa gtccggttgc
     2341 cgcccttgct ttgcggtcga aatcgagaag atcttcttcg ttatagctgt tgtccaaact
     2401 tagcatcggc acaaggtgct gaacagtggg aaacgcggtg ttcaaactat tgccaacacg
     2461 ccgtgtgggc gagtcggctg tgataagatc aggatgctcg ttttctattt cttccaatct
     2521 tttgtacaac tggtcgtact caaagtcaga gatcagcgga tcgctcaaaa cgtaataacg
     2581 atactcatga aaccgtaaaa ttttgcgcaa tgtctctagg tcttttgcag aaattttttt
     2641 agaaagactg cctgttaatt ttgccagtcg atgcgtttct tgttgcgaat acatattgaa
     2701 tttataaatg actaaagata atggttggat gaaatcaaac ggcaggcttt tgttttgcag
     2761 ataaaaccta ttctattatt tttacagcct gttcatgtga aaacgatcaa ttttttgcca
     2821 tggtgaatga agaaataact tctgttcagt tacccgatga acccggtcat ttgatcacag
     2881 atgtagttgc gttggttgac tcttatcccc gggtacctat cacggtggat tgtgtgatct
     2941 tcggctttga taataacgaa cttaaagtgc ttcttatccg cagtgatctt gaaatgtatc
     3001 acggcaggtg gagcttgctc ggcgattttg ctcatgatga tgaagaactg gacgatgcag
     3061 cctatcgcgt tttgcaggaa agaaccggga tggatgatgt atatcttgaa caagtgcgaa
     3121 catttagtca tccgaaaagg catccgggtg gccgcgtatt aacagtcgct tactgctccc
     3181 tgttgaatat cgaacatcac cggctgaaga tccttgacaa tgaattgcac tggcactgca
     3241 taaaaagtat tcgcgacatg gcattcgatc ataaaacgat acttgatgtc tgctatgcgt
     3301 ggttgcaaaa gagaatgctc gaacatcctc tgggattgaa tctgcttccc gaaaaatttt
     3361 cgcttcgtga attgcaaaat ttgtatgaag tgatccttga cataaaactc gaccgccgta
     3421 atttccgcaa gaaattcttc tcgatggact tcctcatcga cacgggagaa tatgaagacg
     3481 atgttccgca ccgtccaggc aggttatatc ggtttaacta cgataagtat gaacacaata
     3541 agcgcaggtg gacggggatc gatttttaat gcggatttat ttgttcttaa tgtactgcgc
     3601 gctgatggca tcgtagtcgt ataaataatt atttgcgttt ccgtttttgt cgaaaatgct
     3661 ttcccaggta ttcagaggct cccagatgca gctacctttt cccctgccgc cgtccacatt
     3721 gaacgcgata tcatttacct cgcgtttgta ttgtgaatat tccactacca ccaggtcctt
     3781 tttataatag cgcgaaagtt cattgatgtt gtcgcgcaga tcgtttagcg ttccatgcca
     3841 ctttggataa tatgagaggc cgatcacgtc gaatggaaca ccccttgcga tcatgttgtc
     3901 cagaaaaaaa tgtgcctcgg cattttggcc gcccaaggcg atgtgcagca taatgatcgt
     3961 tgacggagca acaaccagta cgccattgat gccggcatag atcaactggg caagactatc
     4021 caggttgccg atacttcctt ccggccagat cattccatga ttgatctcat tacccacttg
     4081 taccatatcg ggttccgttc cctggtcttt caattgctgc atcaccattt tcgtgtagtc
     4141 gtacacagat ttcttgagct gtgtaaaatc ttcattgcgc cacgatgctg gtttgaattg
     4201 ttttcccgga tcagcccaat aatcgctgta gtgaaaatcc aggaggaatt tcatgcctgc
     4261 atctttcacg cgcctcgcca tttgcttcgt atgttcaagg tcacaaaaac cttttccggg
     4321 agaatagccg ctgtcatttc cgggatccac aaaaatccgc agtcttatgt aattgaaccc
     4381 gtgatctttt aatatttgga tcgcgtcttt ttgcacgcct ttatcgaaaa atttcatacc
     4441 cgtgctttcc aattcgggga gaaaggaaat gtcggcgccc agcattttat caaccgtttt
     4501 tgcagccggt ttgcttatcg ggaagggatt ttc
//
LOCUS       DASQJI010000449         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_513032,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000449 DASQJI010000000
VERSION     DASQJI010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513032"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2037)
                     /locus_tag="VEV83_12610"
     CDS             complement(<1..>2037)
                     /locus_tag="VEV83_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46009.1"
                     /translation="NITINGNLTVSTTPTINGNFTINNGTVSAAPIYGSSSTLIYNTS
                     AATYSVGKEWNASTTSGAAGPGNPQNVTIQNTNIVAMPNGDRRVPGNLTIYSGGLTLN
                     SNTNKDLYVGGNWANSGTFTHNKRKVTFNGTSGTQTVSGNNTFYDLTLNNSGATTDFG
                     TSSITIDSIFRVTAGTMDGNTSTFIFKGNPGLIAGSGTKRFYNFQINAGANVSDLVAS
                     AGDTHIANSFLNNGTFTQDSSHTTYFDKSNASESLSGIGTTTFGNITIGGPTFSFPTS
                     LDAGSHSFTVCGRMFKFSSNNSSFTGNTSTINFALSAAGVCTIKNGGGVSGTSATFYN
                     VSISSGSVATGVDFGNGLSTIKNNLTINSLGYVTSNAPKYSSSSTLIYNTTSNPYNIG
                     SEWTGNSITAGTGVPQNVTIQNTNNVTTPNSNRGIAGDLQINSGTFTLGSGDLYIAGN
                     WSKASGSTFTPNSQAVIFDGTGSQTIGGTTATTFYNLTNSNTTADLTMSTDVSVTSEF
                     TANNNSNLYIGNNTLTLAGTITGNGTLSGSTSSNLAIGGSTTSLGTLTFKAGYQTLNS
                     ITLNRTSVGASYAVALGSDLSVNNVTFTSGIIATGAHLLTWNNSGSLNAPNIPWASGN
                     SSYSDSYVATCNADGTALSLTTPYSGEVGFKILQVGSTTDSSYFPVGADFNSANR"
BASE COUNT          490 a          444 c          501 g          602 t
ORIGIN      
        1 cctgtttgca ctgttaaaat ccgcgccaac gggaaagtaa gacgaatctg ttgtgcttcc
       61 cacttgcaat attttgaagc ccacttcgcc actgtaagga gtcgttagac taagcgcggt
      121 gccgtcggcg ttgcatgtgg cgacataact gtccgaataa ctgctgttgc ccgacgccca
      181 tgggatgttg ggcgcattaa gacttccgct gttattccat gtcaacaaat gcgctcctgt
      241 tgcaataatc ccggatgtga aggtcacgtt gtttaccgaa agatcgctgc ctaatgcgac
      301 tgcatagctg gcaccgactg aagtacgatt taatgtaata ctgtttagtg tttgataacc
      361 cgctttgaat gtcagtgtgc cgagacttgt cgttgatcca ccgatcgcaa gattagatga
      421 cgtgctgccg gataaggtac cattgcctgt aattgttccg gcaagggtaa gcgtattatt
      481 gccgatataa agattcgagt tgttgtttgc agtgaactca gaagtcactg atacgtccgt
      541 cgacatggtc agatccgctg tggtattgct gttggtcaaa ttatagaaag tggtcgcagt
      601 tgttcctccg attgtttgcg agcccgtgcc atcaaagatg accgcctggc tgttcggagt
      661 aaatgttgag ccacttgctt tagaccaatt ccctgcgatg tatagatcac cggaaccgag
      721 agtgaacgtt ccggagttga tctgtaaatc tcctgcaata ccgcgatttg aatttggcgt
      781 cgtgacattg ttcgtgtttt gaatggtcac attttgtgga actccggtgc ctgcagtaat
      841 tgaattacct gtccactcgc tgccgatgtt gtatgggttt gacgttgtgt tatagataag
      901 cgtcgatgaa gagctgtact ttggggcatt actcgttaca tatcccagtg aatttatcgt
      961 gagattgttt ttgatcgttg agagaccgtt accgaaatcg acgccggttg caacggaacc
     1021 ggatgaaatg cttacgttgt aaaaagttgc cgacgtgcca gaaacgccgc cgccgttctt
     1081 gatcgtgcaa acacccgcgg cagacaaagc gaaattgatc gtgcttgtat ttccggtgaa
     1141 tgaggaatta ttactgctaa acttgaacat ccgtccacaa acggtgaatg aatgggaccc
     1201 tgcgtcaagc gatgtcggaa aactgaaagt agggccgccg atggttatat tgccgaatgt
     1261 tgttgttcca atccccgata aactttctga agcattagat ttatcgaagt aagtcgtgtg
     1321 cgagctgtcc tgtgtaaaag ttccattgtt taaaaagctg ttcgcgatat gagtatcacc
     1381 agcactcgcc acaagatcgg aaacattcgc tcctgcattg atttgaaaat tatagaagcg
     1441 cttggttccg ctgccggcga tcaagccggg attgcctttg aagataaatg ttgatgtatt
     1501 accatccatt gtacctgcag tgacccgaaa aatactgtcg atagttatgc tgctggtacc
     1561 gaaatctgta gtcgctccgc tattatttaa agtgaggtca tagaaggtgt tgttaccact
     1621 aacagtttgc gtaccgctgg tgccattgaa tgttaccttg cgcttattat gtgtgaacgt
     1681 tccgctgttg gcccagttac cacctacata taaatcctta tttgtattac tgttcaacgt
     1741 taatccgccg ctgtatatcg tgagattacc ggggactctt cgatctccat ttggcatcgc
     1801 cactatattc gtattttgta tagtcacatt ttgaggattg cccgggcctg cagcgccaga
     1861 tgtggtgctc gcattccatt ctttgccgac tgaataagtt gcagccgatg tattataaat
     1921 aagagttgag ctgcttccgt aaatcggcgc agccgatact gtaccgttgt tgatcgtaaa
     1981 attcccattg atcgttggcg tggtggaaac ggttaagttc ccatttatgg tgatatt
//
LOCUS       DASQJI010000450         3999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2510918,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000450 DASQJI010000000
VERSION     DASQJI010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3999
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2510918"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2605
                     /locus_tag="VEV83_12615"
     CDS             <1..2605
                     /locus_tag="VEV83_12615"
                     /inference="COORDINATES: protein motif:HMM:NF021126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HYK46010.1"
                     /translation="YIITNECYYLPTALYLLTTTRQISNQRIITFSYVCRSYKFRMTL
                     NWKKITPHLIAIGVFLIVALVYCKPALQGKVLQQSDIIHWKAMAQNSFKYKETHGHYP
                     LWTNSMFSGMPAYQIAMDPQNPFNLIYLHKLFTLFLGKPFSFFFLLCMCFYFLTQVLN
                     IDYRLGIMGALAYAYASFSSILVVAGHETQVQAMAYMAALLGAIILVYRKRYWPGAAL
                     TALFTGLLIAVNHLQITYYFLIIAVFMTVYYIIQWIKAKQYRHLVKSLVIVAVTGSLG
                     VASNLVILATTYDYSKATMRNGVLELDSAQKNSQASGGLPIEYAFRWSFQKSEVLSIL
                     VPNIYGGVSGGSELTKDSHLAAMAVQNGVPDDQATQFASAFPAYWGEQPFTSGPVYLG
                     AIICFLFLFGMIYLKRKDKWWILAVCLLAVMMSWGRFFPAFNDFLFYHLPLYNKFRVP
                     TYTLAIPQFLFPLLAVITLQQLFFLETDKSLALKKLKTSGYVMLGVFAIIAMLYTSFT
                     YTATSDDSVISQLTQMTGGNKDAANSFYNALKEDRQSLFGKDILRSLLFAAVAFACLW
                     LYLKNKMKSSYAMIALVVLSSIDVLAEGRRYLNDDHFQAREDQESQNFAPSAVDQQIL
                     QDTSYYRVLNLSTSDPFSDAMTSYFHNSIGGYHPAKLAIYEDLLNYQVRNKLNINVLN
                     MLNAKYVITAGQKGEPAVQQNPEALGPCWFVKHITYVKDDAAAMKALDNNHPADTVIV
                     EESEKSKIPFTPAADSTARITLVKNDNDVIDYTTASNSNQFAVFSEIYYDRGWKAYID
                     NKEAPIVRADYALRGLAVPAGNHHIHFEFTPDSFYGSEKIAIAASAAVWLLLAGSVFV
                     VVRKKKMKQAV"
     gene            complement(2968..3228)
                     /gene="rpmA"
                     /locus_tag="VEV83_12620"
     CDS             complement(2968..3228)
                     /gene="rpmA"
                     /locus_tag="VEV83_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HYK46011.1"
                     /translation="MAHKKGEGSVKNGRDSQSKRLGVKIYGGQPAIAGNIIVRQRGTT
                     YHPGKNVGVGKDFTLFALADGVVEFRKTKSDRTTVSVLPAEA"
     gene            complement(3309..3614)
                     /gene="rplU"
                     /locus_tag="VEV83_12625"
     CDS             complement(3309..3614)
                     /gene="rplU"
                     /locus_tag="VEV83_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HYK46012.1"
                     /translation="MFAIVKIAGQQFKVQEGQDLYVPHIAGKSGDKIEFSDVSLVDNE
                     GKLSLAADVKAIVKAEIVDELVKGDKVIAFKMKRRKGFRKKHGHRTQYTKIKIQSIA"
     gene            3755..>3999
                     /locus_tag="VEV83_12630"
     CDS             3755..>3999
                     /locus_tag="VEV83_12630"
                     /inference="COORDINATES: protein motif:HMM:NF015291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HYK46013.1"
                     /translation="MYLKSLLAKPFANYIYNKTKKWAATAVEDQETLMKSLVKTAKNT
                     EFGKEHKFESIQSYENFTQQIPVRDYEDIKPYIDRIK"
BASE COUNT         1116 a          830 c          831 g         1222 t
ORIGIN      
        1 atacattatc acgaacgagt gctattacct tccgaccgca ctctatctat taacaacgac
       61 gaggcaaata agcaatcagc gaattatcac attttcgtac gtttgccgct cttataagtt
      121 ccgcatgaca cttaactgga aaaaaatcac acctcatcta attgccattg gtgttttttt
      181 gatcgttgcc ttagtttatt gcaaacctgc actgcaggga aaagtacttc agcagtcgga
      241 catcatccac tggaaagcca tggcccagaa ctcttttaaa tacaaggaaa cgcatggcca
      301 ttatccgtta tggacaaata gtatgttcag cggcatgcct gcataccaaa tagcgatgga
      361 cccgcaaaac cccttcaatc ttatttacct gcataaatta tttacattat ttctcggcaa
      421 gccgttttct tttttctttt tactgtgcat gtgcttttat tttcttacgc aggttttgaa
      481 catcgactac aggcttggga tcatgggtgc tctcgcgtat gcgtatgctt ctttcagtag
      541 tatccttgtc gtggcgggac atgaaacgca agtgcaggca atggcatata tggctgcgct
      601 gctgggcgca ataattctcg tgtatcgaaa acgatattgg ccgggtgctg ctttaactgc
      661 tttgttcacc ggtttgctga tcgcggtgaa ccacctgcag atcacctatt actttttgat
      721 cattgcggtt tttatgacgg tctattacat catccagtgg atcaaagcaa aacagtacag
      781 gcatttggtc aaatcattgg tgatcgttgc agtgaccggt tcgttaggtg ttgcgtcgaa
      841 ccttgtgatt ttggcgacga cttatgatta ttccaaagca acgatgcgta atggtgtttt
      901 ggagttggat tctgctcaaa aaaatagcca ggcgtcaggc ggcttgccga ttgagtatgc
      961 gtttagatgg agttttcaaa agtctgaagt gttgtcgatc ctggtgccta acatttatgg
     1021 aggcgtttcc ggtggctctg agttaacgaa agattctcac ctcgcagcga tggcggtaca
     1081 aaatggcgtt ccggatgacc aggcaacaca atttgcatca gcattcccgg cctattgggg
     1141 ggagcaaccc ttcacttcgg gcccggtata tttaggcgct atcatttgct ttttgttttt
     1201 attcggaatg atatatctca aacgaaaaga caagtggtgg atactggccg tttgtttatt
     1261 ggcagtgatg atgagctggg gcagattctt tcctgcattc aatgattttc ttttttatca
     1321 tctcccgttg tacaacaaat tccgagtacc aacatataca ttggcgattc cacagttcct
     1381 gtttccactt ttagcagtga tcactctgca gcaattattt tttcttgaaa cagataagag
     1441 tttagcatta aaaaaactta agacaagcgg ttacgtgatg cttggcgtat ttgcgatcat
     1501 cgcgatgttg tacacgagtt ttacgtacac cgcaacttcc gacgattcag tgatcagcca
     1561 gctcacgcaa atgaccgggg gaaataaaga cgctgcaaac agtttttata atgcgttgaa
     1621 agaagacagg caatcattgt ttggaaaaga cattcttcgg tcgctgcttt ttgccgcagt
     1681 agcatttgct tgtttgtggc tgtacctgaa aaataaaatg aaatcttcct acgccatgat
     1741 cgcgcttgtg gttttaagtt cgatcgatgt gctggctgaa ggaaggcgat atttgaatga
     1801 tgaccacttc caggcaaggg aagatcaaga atctcaaaat tttgcaccgt cggcggttga
     1861 tcaacaaatt ttacaagaca caagttatta tcgcgtactc aacctaagta cgtctgaccc
     1921 ttttagtgat gcgatgacgt catattttca caattcaatt ggcggttatc atcctgcaaa
     1981 gttggccatc tatgaagacc tgctgaatta ccaggtgcgc aataaactaa atattaatgt
     2041 gcttaacatg ctgaatgcaa aatatgtaat taccgccggt cagaaaggcg aacctgcggt
     2101 gcagcaaaac ccggaggcgt taggaccgtg ctggtttgta aaacacatta cctatgtaaa
     2161 agatgatgcg gccgcaatga aggcgcttga taacaatcat ccggcagaca cggttattgt
     2221 agaagaatcg gaaaaaagca aaataccttt tacgccggca gcagacagca cagcgagaat
     2281 cacgcttgta aaaaatgata atgatgtgat cgattacacc accgcaagca acagcaacca
     2341 gtttgcggta ttcagtgaga tctattatga tcgtggatgg aaagcataca tcgacaacaa
     2401 agaggcgcca atcgtaagag cagattatgc attaagaggg ctcgcagttc ccgccggcaa
     2461 tcaccatatt cattttgaat ttacgccgga ctctttttat ggcagcgaaa aaattgcgat
     2521 cgcagcgtcg gccgccgtat ggctgttact cgcaggttct gtatttgtgg tcgtgcgaaa
     2581 aaagaaaatg aaacaagctg tgtagtttga tcgacacgga ttgaaaaaac atcttgcgac
     2641 agctttgctt tcatgagagc gcatacaaat taaaaagtcc cggaaacatc cgggacttag
     2701 tcttattagc tgtgaaaatc tccttcttat ttttttcctt tcttagcagc tttcttagga
     2761 gcagctttct ttgcagcttt tttcggagcg gctttctttg cagctttttt tgctgttgcc
     2821 atagttttga aatttaatgg ttagtaaaat aataagacta aagtataaat tttatttaca
     2881 aacaccaaaa aaaattatta tacgaacgtg aataacacgt tcataacttt caaacttgcg
     2941 caacaaaaaa tgaaatgtgt tttaagatta tgcttctgcg ggtaaaacag aaacagtggt
     3001 tctgtcggat tttgtttttc tgaattcgac aacaccgtca gctaatgcaa acaatgtaaa
     3061 atcttttcct actccaacat ttttccccgg atgataagtt gtgccgcgtt gacgaacgat
     3121 gatgtttcct gcaattgccg gttggccgcc atatattttt acaccaagtc ttttgctctg
     3181 cgaatcgcgg ccattcttta cgctgccttc acctttttta tgagccatga tttcttgttt
     3241 taaaattcca agatccaaat atcaaatctc aattttttgg agcttgtttt tttgtgattt
     3301 gaaatttttt aagcgatgct ttggatttta atttttgtgt attgtgttct gtggccatgt
     3361 tttttacgaa acccttttct tcttttcatt ttaaaagcta tcaccttgtc tcctttcacg
     3421 agttcgtcaa cgatctccgc ttttacaatt gctttcacat ctgcagctaa tgaaagtttc
     3481 ccttcattat ccaccaacga tacatcgctg aattcaattt tgtctccgct ctttccggct
     3541 atatgaggta catacagatc ctggccttcc tgcaccttaa attgttgacc agcaattttt
     3601 acgatcgcaa acatgactta aaaaatttag gacggcaaag gtaagggata ccatcaatta
     3661 aacgaaaaga aacttgaaat tttcactcgt gtctttaaca aataaatata aagcatcttc
     3721 attaccatta attttgcctg cttagtattg ccgtatgtat ctgaaatccc tgttggctaa
     3781 accatttgct aattatatct ataataagac aaagaagtgg gctgcgacgg cggtggaaga
     3841 ccaggaaacc ctgatgaaat cgctcgtaaa aacggcaaaa aatacggagt ttggcaagga
     3901 acataagttc gaatctatcc agtcgtacga aaattttacg cagcagatcc cggtccggga
     3961 ttatgaagac attaagccct atattgaccg gataaagga
//
LOCUS       DASQJI010000451         3917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_513352,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000451 DASQJI010000000
VERSION     DASQJI010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513352"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(583..1005)
                     /locus_tag="VEV83_12635"
     CDS             complement(583..1005)
                     /locus_tag="VEV83_12635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1810 domain-containing protein"
                     /protein_id="HYK46014.1"
                     /translation="MSDYNLQRFIDAQRSDYATALEEITAGKKRGHWMWYIFPQLLGL
                     GYTSTSVTYSIKDLDEAAAYLRDPVLGVRLVEICNALLKLDNNDAHKIFGSPDDLKLR
                     SSMTLFSLVPGADKIFQQVLDKFFGGRKDEKTLQLLNL"
     gene            complement(1043..3370)
                     /locus_tag="VEV83_12640"
     CDS             complement(1043..3370)
                     /locus_tag="VEV83_12640"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HYK46015.1"
                     /translation="MNSLDSFSAKLITNLRANAKEHAYVVTDKSVFRAGESVWFTAFL
                     LNSASQKLSTKSRFVFADIVNEHDSVVKRVTMDAGNRQLTSRLQLPDSLPAGFYWLRA
                     YTSRMALIDSNEIGIRPLYVVGRTNNIVRAPNKKATTREEIPTVAFYPEGNNIITGIN
                     SIVALSVTINGAPLSIDGYVKDDRETIATKFSTNSNGLGKFEFEPSGYRKYLAVINWQ
                     GKEISYLLPAFNFFGGQLSASKQSDGYKLRILLGDSIYAKDARTYVAGFSRDSLVFAA
                     IGKGQCEVFVDDRKLPQGITTFYLFNKDFKPISERSVYVNDKPVVAVTTDKNSYATRD
                     KVTLAVSVTDAEQQAIPAVVAVSVSDSIFSNDDECDRNNGPATLDNLFSNDNTCFNDE
                     QMDLMMLTRANTYDRFSEKQTQTFSSDDDSLLFIKGTIVNARKEPAANKLVLLISGSG
                     TSGFFATDTTDTGGQFCFPVENYPDSAQFAIQVKELNKSRALNDQVLINKPVFPRLKT
                     PAALKKYYEPEPKLRQRVSNYYNVQWNDAGEPQLAPVMVTGQQKTVDYDESKRVSPYS
                     AILTSKDLDGRMNVDDAILMIPGLQVLNGYVVIHGLNAMIAPNPASEPMIVVEGAQMT
                     PSSDAIGIVSPVLSYLHSLNPKDIDFIEVLKDADAAAYGVRGANGVILINLRNKPREY
                     YSFTNNMTQFYAEGISKPAVFVSPVYDKKDKKSAASPDYRSTIFWNGSLLTNDAKSAG
                     ISFYTSDIPSIYRVTVRGITIHGDIIYRTINIQSK"
BASE COUNT         1033 a          898 c          849 g         1137 t
ORIGIN      
        1 aaagcccatc gcgcattcct ttaagaaatg tcgccgcgta tgataacgga gtgtcgcttc
       61 gttagcttct ttaaataatt gatcgttatg gatctctttt tgggtcatga cctcatgctc
      121 agcattctgg agcgatggga aaggacatcg ccttcgtttt acaagtgatc aatcgaaaca
      181 acgatcgcta ttttcgtttt aatttttatt atgtaaccag ctcctggttt catggcggct
      241 tcgttgcgtc gcacacttgt ccgtctcgtt caatgtgcat caaaattgca ttgcgatgtc
      301 taaggtagca atttatcggc tctggatttc cgatcattcc gtttcccgat ctcaaccctt
      361 tcgattcctg gtgcgaaaca aatttaagaa atcataaaaa cgattctata tacaacacac
      421 cgtttcaatc tgcattttaa atggacgaga acggggtgac acaattgttt tactgttgtt
      481 ttactgtttg tacaagaaga tgatacgtag aaaaaataaa tagggaatta taaggttcat
      541 ttaaaagaac ctcttggaga atgacacggt gcttttcaaa acttacaagt tcaatagctg
      601 taatgttttc tcgtctttcc ttccaccaaa aaatttatcc aacacttgtt gaaatatttt
      661 atctgcacct ggcactaacg agaacaatgt catggatgac cgaagtttca gatcgtccgg
      721 actgccaaat attttatgcg catcgttgtt gtcaagctta agcagcgcat tgcagatctc
      781 aaccaggcga acgcccagca ctggatccct gaggtatgcc gccgcttcat ctaagtcctt
      841 tattgagtag gtgacagacg tgctcgtgta cccgaggccc aacagttgcg gaaaaatata
      901 ccacatccaa tggcctcgtt ttttgccggc cgttatttcc tcgagagccg tagcgtagtc
      961 gcttcgctga gcatcaataa atctttgaag gttgtaatcg ctcataaaaa aattcttgcg
     1021 tgaaatcgtt aactgcggtt gctcatttac tttgaatatt gatcgttcta taaatgatat
     1081 cgccatggat cgtaatacct ctaacagtta ccctgtatat acttggaata tcacttgtgt
     1141 aaaaactgat accggcactt tttgcatcat tcgttagcaa gctgccgttc cagaaaatgg
     1201 tggagcgata atcaggtgat gcagccgact ttttatcttt cttatcgtaa accgggctca
     1261 cgaatacggc cggtttcgag ataccctccg cataaaattg ggtcatattg tttgtgaaag
     1321 aataatattc ccgtggctta ttcctgagat tgatcaggat aacgccgttt gcgcctctaa
     1381 ctccatacgc agcagcgtcc gcatccttaa gcacttcaat aaaatcaatg tcctttggat
     1441 taagactgtg caggtagctc agaacagggc taacaatgcc gatcgcgtcg gaagaaggcg
     1501 tcatctgcgc tccttccacg acaatcatcg gttcggatgc gggattaggc gctatcattg
     1561 cattcagtcc gtgaataacc acgtagccat ttaatacttg caagccaggt atcattagga
     1621 tcgcatcatc cacattcatt cgcccatcga gatctttcga tgttaaaatt gctgagtacg
     1681 gactaactct tttcgactca tcgtagtcaa cagtcttttg ctggcctgtt accataacgg
     1741 gcgccaactg cggttcgccg gcatcattcc actgcacgtt gtagtaattg ctgacacgct
     1801 gccgtaactt tggctccggt tcataatatt tttttagcgc ggctggtgtt tttaatcgtg
     1861 ggaacacggg tttattgatc aatacctgat cattcagggc gcggctctta ttcaactcct
     1921 tcacctggat cgcaaactgt gcgctgtccg ggtaattttc caccgggaaa caaaattggc
     1981 cgccggtatc agtggtgtct gttgcaaaaa aaccgctagt tcctgagccg gaaatgagta
     2041 acacgagttt atttgctgca ggttctttcc tggcatttac aatagtccct ttgataaaga
     2101 gcaggctatc atcatcactc gaaaaagttt gtgtttgttt ttctgaaaaa cggtcataag
     2161 tgttagcccg cgtcagcatc atcaaatcca tttgctcatc gttaaagcag gtgttatcgt
     2221 tcgagaataa attatcaagt gtcgccgggc cgttgttgcg atcacattca tcatcattgg
     2281 aaaatatgga atcgctgacc gacacagcga caaccgcggg aattgcttgt tgttctgcat
     2341 cggttaccga aacggcaaga gtaaccttat cacgtgtagc gtagctattt ttatcggttg
     2401 taactgcaac cactggcttg tcgttcacgt aaacgctgcg ctcgctgatc ggcttaaaat
     2461 ctttattgaa caagtagaag gtggtgatgc cttgcggtaa tttcctgtcg tcaacaaata
     2521 cttcgcactg gcctttacct attgcggcga ataccaaact gtcgcgcgaa aagcctgcaa
     2581 cataagtacg tgcatccttt gcgtagatag agtcgccgag taagatcctt aatttataac
     2641 cgtcggattg ctttgaagca gacaattgcc caccgaagaa attaaaagcg ggaagcaaat
     2701 aactgatctc ctttccctgc cagtttatca ctgccaggta tttgcgatac cccgacggtt
     2761 cgaattcaaa ttttccgagg ccgtttgaat tggtggaaaa ttttgtggcg atcgtttcgc
     2821 gatcgtcttt cacatagccg tcgatactca acggggcgcc gttgatggtt acactcagcg
     2881 ccacaattga atttattccg gttattatgt tattcccttc cgggtagaaa gcaacagtcg
     2941 ggatctcttc gcgtgttgtt gctttcttgt ttggagcacg cacgatattg tttgttcttc
     3001 ccactacgta taacggcctt attccaatct cgttgctatc gatcaatgcc attcggcttg
     3061 tatatgcgcg gagccagtaa aagcctgccg gcaacgaatc tggtagctgc aatcgggaag
     3121 ttagttgcct gtttcctgca tccatggtta cgcgtttgac gacgctgtcg tgctcattca
     3181 ctatgtcagc aaaaacaaac ctgcttttag tgcttaattt ctgcgaagct gaattcaaaa
     3241 gaaatgcagt aaaccaaacc gattctcccg cgcggaacac cgacttgtcg gtaacgacgt
     3301 aagcgtgctc ttttgcattc gccctgagat tcgtgatgag tttggctgaa aacgaatcca
     3361 gcgaattcat atcagcagtt tgagcacccg ctgaaatggt caataggagg aataaccaaa
     3421 aacatgttag cctgtcacaa cgcatcgttc ttaatttcaa tcaaagtaaa aacttttccg
     3481 gcatgtagat gcttttatac gtgaagacta atagctcaca aagaagttct cgctccccac
     3541 taagcacgcg aaggctacaa aggaactatt aaaatctctc tttgtgtact cagtgggctt
     3601 tgtgggatcg atatgagttg gagtcgcacg ttaaaatgaa aaaactgcgc gaacgaagtt
     3661 cattctccca ccaagcgcgc gaaggccaca aaggagcatt aaaaatctct cttcgtgaat
     3721 tccgtggcct ttctgggatc gatattagtt gggacgcacg ttaaaatgga aaaactgcgc
     3781 gaacgaagtt cattctccca caaagcgcgc gaaggccaca aaggagcatt aaaaatctct
     3841 cttcgtgaat tccgtgggct ttgtgggatc catatgagtt cgggtcgcac cttaatatga
     3901 aaacggcgct aaagaaa
//
LOCUS       DASQJI010000452         4687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_513465,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000452 DASQJI010000000
VERSION     DASQJI010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513465"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1493)
                     /locus_tag="VEV83_12645"
     CDS             complement(<1..1493)
                     /locus_tag="VEV83_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HYK46016.1"
                     /translation="MHTETGVSVPVEVHHEEHVHHHHHESFITKYVFSQDHKMIARQF
                     LMTGMFWGVLGGLMSVLFRLQLGYPEESFPWLQDLLGKWWFENGHLTAQAYYALVTTH
                     GTVLVFFVLTAGLSGTFANLLIPLQVGARDMASPFLNMLSYWFFFLASVIMLSSIFVS
                     TGPFSGGWTAYPPLSALHDASPGSQHGMDLWLIAMATFVVSSLLGGLNYIVTVLNMRT
                     KGMSMTRLPLTIWALFFTAVLGVLSFPVLLSGFILLIFDRNFGTSFYLSDIFVASTNT
                     ALPNEGGNAILFQHLFWFLGHPEVYIILLPALGMVSEIISTNARKPIFGYMAMVASLF
                     AIAILSFLVWAHHMFVTGLNPFLGSIFVLLTLLIAVPSAIKVFNWLTTLWRGSIRFTP
                     AMLFAIGFVSLFISGGLTGIWLGNSALDIHLHDTYFVVAHFHIVMGVASMFGMFAGIY
                     HWFPKMFGRYLNHTLGYIHFWITMIGAYLIFWPMHYEGLAGMPRRYY"
     gene            complement(1562..2641)
                     /locus_tag="VEV83_12650"
     CDS             complement(1562..2641)
                     /locus_tag="VEV83_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HYK46017.1"
                     /translation="MSMFFTITVIILVFLIIFQIAKASEYVAVIKGEEKSRKEQNKVN
                     GFFMIAFLIAGLIGVYLCNKALYPKTLMPHGAASTQGEKVDSMLWLTLIITGTVFLIT
                     QFLLFWFNFRYQESDKRKAYYYPHNNTLELIWTVVPAIAMTVLVVIGLRNWFRFTGDA
                     PNNAMQVEVTGKQFGWIFRYAGHDNIFGKKYYKLIDDANSNSLGQDWNDNTNFDDIVV
                     SQTMYVVKNKPVKLIINSRDVIHDVGLSEFRLKMDAVPGTPTTLWFTPKYTTKEMKDI
                     TGNPDFQYEISCDQMCGNGHYSMKGVVEVVTQEEYDIWQAQQKPNYYAAFPDKDPANK
                     KPATPVADSTKTTATAATSTDKTKM"
     gene            complement(2676..3908)
                     /locus_tag="VEV83_12655"
     CDS             complement(2676..3908)
                     /locus_tag="VEV83_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol:cytochrome C oxidoreductase"
                     /protein_id="HYK46018.1"
                     /translation="MASIKEQFEIPSRMRTWSVVLIAIGVVAFILGLVTKGLSSDEHQ
                     KAIFIGTLMYNSIFWMLICNASMFFICATTLAMGGWNTVIRRVPEAISTLVPVFGTIT
                     LLIFLYVVVIDHTHSVYHWLDKEAVEKNAALKGKSGFLSPVFFMVWSILAIGLWSLLG
                     YRMRRLSSEADDGPMDYETGKNYIWRNTVTGAMFIVWFALTVASTVPWLWMMSLDPLW
                     YSTMYSWYTFGSSFVAGMSLIGLWLIYIKNKGYLAYANQNHLHNIGIFMFAFSVFWTY
                     LWFSQYMLIWYGNIPEETIYFKHRVQGPWKGIFFMNIIINFVCPILILMKRAVKRNYT
                     LMTFMAVLIIFGHWIDFYQMVMGSIRPEQATLSWLDFGIAALFIGIMINFVGRALAKK
                     PLVPEYHPFLKESVVHHI"
     gene            complement(3936..4571)
                     /locus_tag="VEV83_12660"
     CDS             complement(3936..4571)
                     /locus_tag="VEV83_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK46019.1"
                     /translation="MKLQSFIFIVIAGFVVGGCSNVRRDPGHVYMPDMGYSRAYETYA
                     DHSDLEKDGIFYNNMPVAGTIARGEELPFPLAKDAPGDSANYVASRQITNPLTLDSTH
                     LQEAQRLYLVYCGICHGKALDGNGPLYNSGNGPFGAKPATLVGDPKYESMPEGQMFYS
                     ATYGKNLMGSYASQLTRTQRWEVIAYIKAKQAANAAKSAPATSDSTSAGTK"
BASE COUNT         1340 a         1123 c          968 g         1256 t
ORIGIN      
        1 tcgtaataac ggcgaggcat gccggccaaa ccttcatagt gcatcggcca gaagataaga
       61 tacgcaccga tcattgtgat ccaaaagtgt atatatccaa gtgtgtggtt gagatagcgg
      121 ccaaacattt tcgggaacca atgataaata ccggcgaaca ttccgaacat agatgccacg
      181 cccatcacaa tgtgaaagtg agcgactacg aaataagtat cgtgcagatg aatatcgagc
      241 gcagagttcc cgagccagat acctgttagt ccgcccgaga taaataagct gacgaaacct
      301 atggcaaaca gcattgctgg tgtaaaccgg atgctcccgc gccacaaagt tgtgagccag
      361 ttaaatactt ttatcgcgga tggcaccgca atcagcagtg tgagcaaaac gaatatagaa
      421 ccaaggaacg ggtttaaacc ggtaacgaac atatggtgcg cccaaacaag gaatgataat
      481 atggcgatcg caaaaagtga ggccaccatt gccatataac cgaagatcgg ttttcgggca
      541 ttcgtcgata tgatctccga caccatcccc agggccggaa gcaaaatgat atagacctcc
      601 ggatgtccta aaaaccaaaa caggtgctga aagagaatag cattacctcc ttcgttaggc
      661 aaggctgtgt tagtggaagc cacaaaaata tcagacagat aaaagcttgt tccaaagttg
      721 cggtcgaata tcaggagaat gaagcctgat aaaagaacag ggaatgaaag cacgccgagg
      781 actgccgtaa agaaaagtgc ccatatcgtc aaaggcagac gggtcatgct catgcccttc
      841 gtgcgcatgt tcaaaacagt tacaatataa ttcaggcctc ctaataatga agacactacg
      901 aatgttgcca tagcaataag ccagaggtcc atgccgtgtt gggaacccgg cgacgcgtca
      961 tgcaatgcgc ttaaaggagg ataggctgtc cagcctccgc tgaatggtcc ggttgaaaca
     1021 aatatgctcg acagcatgat cacacttgcc aggaaaaaaa accagtagct aagcatattt
     1081 agaaaagggg acgccatgtc tcttgcgcct acctgcagcg ggatcagaag atttgcaaat
     1141 gttccgctca gacccgctgt taatacaaag aatacaagca ctgtcccatg tgtggttacc
     1201 agtgcgtaat acgcttgtgc tgtgagatgg ccgttttcga accaccattt tccaagaaga
     1261 tcctggagcc acggaaaact ttcttcagga taaccaagtt gaaggcgaaa caatacagac
     1321 atcaatccac ctaaaacgcc ccaaaacata cccgtcatca aaaactgcct cgcgatcatc
     1381 ttatgatcct ggctgaaaac atattttgta ataaagcttt catgatgatg atgatggaca
     1441 tgttcttcat gatgcacctc caccggaacg cttacacctg tctctgtgtg catatgtgcc
     1501 tcgttactca ttagatatct tattaattaa taaatcaaac attttgccag ccggaactat
     1561 tctacatctt cgtcttatca gttgatgtgg ctgcagtggc tgtcgttttt gtactgtcgg
     1621 ctaccggtgt tgccggtttt ttattagccg ggtctttatc cggaaacgca gcataataat
     1681 ttggcttttg ctgcgcttgc caaatatcat attcttcctg tgttactact tcaacaacac
     1741 ctttcattga ataatgcccg ttgccgcaca tctggtcaca acttatttcg tattggaaat
     1801 ccgggttgcc ggtgatatct ttcatttctt ttgtcgtgta ctttggcgta aaccataaag
     1861 tagtcggcgt tcccggcact gcatccattt tcagcctgaa ttctgaaaga ccgacatcgt
     1921 gtatcacatc tcgtgagttg atgatgagtt ttaccggttt gttctttaca acatacatcg
     1981 tttgggaaac aacgatatca tcgaaatttg tattatcatt ccagtcctgg ccgagcgaat
     2041 tgctattcgc gtcgtcgatc agtttataat atttctttcc aaaaatattg tcgtgtcccg
     2101 catagcgaaa tatccatcca aattgtttgc cggttacttc cacctgcatc gcgttgttag
     2161 gagcatcacc cgtaaagcgg aaccagttac gaaggccgat caccaccaac acggtcatcg
     2221 cgatcgcagg caccacggtc caaattaatt cgagcgtatt gttatgcgga tagtagtatg
     2281 cctttctctt gtcgctttcc tggtaacgga aattaaacca gaaaagaagg aattgcgtga
     2341 tcaaaaaaac ggtgcctgtt attatcaagg ttagccatag catgctgtca actttttcac
     2401 cttgtgtgct ggcagcgcca tgaggcatta gtgttttcgg atataatgct ttattacata
     2461 agtacacgcc aatgagaccg gcgatgagga aagctatcat aaaaaatccg ttcactttat
     2521 tctgctcttt cctgcttttt tcttcccctt tgataacagc tacgtattca ctggcctttg
     2581 ctatctggaa aatgatcaaa aagaccagga taataaccgt tatggtaaaa aacattgaca
     2641 tgtcaactct tattttcagt ttagaacttc aactttcata tgtgatgcac gacactttct
     2701 ttcaggaacg gatgatactc gggcacgagc ggctttttag caagtgctct tccaacaaaa
     2761 ttgatcatta ttccaatgaa taaagccgct atgccgaaat ccagccagct taatgtagcc
     2821 tgttcaggac ggatgctgcc catcaccatt tgataaaaat ctatccagtg cccaaaaata
     2881 atcaataccg ccatgaacgt cattagtgtg taattgcgtt taacagcgcg tttcatgagg
     2941 atcagtatag gacaaacaaa gtttatgatg atgttcatga agaaaattcc cttccatggg
     3001 ccctgaacac ggtgtttgaa ataaattgtt tcttccggaa tgttaccgta ccagatcaac
     3061 atgtactgcg agaaccacag gtaggtccaa aaaacagaga atgcgaacat aaagatccca
     3121 atgttatgca gatggttttg gttcgcgtag gcgagataac ctttgttttt gatgtagatc
     3181 agccacaggc cgatcaggct cattccggct acaaaggaac ttccaaacgt ataccagcta
     3241 tacatggtgc tgtaccaaag cggatcaagg ctcatcatcc ataaccatgg aacagttgac
     3301 gcaacggtca acgcaaacca tacaatgaac atcgcacctg taacggtatt cctccaaata
     3361 taatttttgc ccgtttcata atccattggt ccgtcgtcgg cttcgctgct caggcggcgc
     3421 attctgtagc cgagcaaact ccataaacca attgcaagaa tgctccatac catgaaaaat
     3481 accgggctca aaaagccgct ctttcctttc agggccgcat ttttttccac agcttctttg
     3541 tcgagccaat gataaacact atgcgtatga tcgatcacga ccacgtacag gaagatcaaa
     3601 agagttatgg taccaaaaac cggaaccaac gtcgaaatag cttcaggcac tcttcttata
     3661 acagtattcc atccgcccat ggccagcgtt gtagcacaaa taaagaacat actcgcattg
     3721 cagatgagca tccagaaaat gctattgtac atcagcgttc caatgaagat cgccttttga
     3781 tgctcgtcgc tgcttaagcc ctttgtcacc aacccaagaa tgaaagcaac aacaccaatg
     3841 gcaattaaga ccactgacca ggttctcatc ctcgaaggaa tttcaaattg ttcttttatt
     3901 gaggccattc gtttttgttt atcgcctgat aatttttatt tcgttccggc acttgtacta
     3961 tcgcttgttg ccggtgccga cttagctgca ttagccgcct gtttcgcttt gatataggcg
     4021 atcacctccc agcgctgcgt cctcgtcaat tgcgaagcat agcttcccat taggttttta
     4081 ccgtaggttg cagaataaaa catttgtcct tccggcatac tctcatattt cggatcacca
     4141 accaatgttg caggctttgc accaaaagga ccattaccac tattgtacaa cgggccatta
     4201 ccgtccagag cctttccatg acaaataccg caataaacga gatagagacg ttgggcttcc
     4261 tgtaaatgcg tagagtcaag cgttaatgga tttgttattt gccttgaagc aacataattc
     4321 gccgagtcgc ccggtgcatc ttttgccaat ggaaatggca attcttctcc ccttgcgatc
     4381 gtgcccgcaa ctggcatatt attataaaat atcccgtctt tttccaggtc gctgtggtct
     4441 gcataagttt cataagcgcg gctataaccc atgtcaggca tatacacatg cccggggtcg
     4501 cgacgcacat tgctgcatcc cccaaccacg aaaccggcga tgacaataaa tatgaatgat
     4561 tgaagtttca tttccgattt aattagatta caacctgcgt atcctctttg atcagtcgtt
     4621 gttccttatc atacgtgccg atccaccagc ctgattcaac ttcctgtacg ctaacttcta
     4681 cagctcc
//
LOCUS       DASQJI010000453         4421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_975415,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000453 DASQJI010000000
VERSION     DASQJI010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975415"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /gene="tilS"
                     /locus_tag="VEV83_12665"
     CDS             <1..390
                     /gene="tilS"
                     /locus_tag="VEV83_12665"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HYK46020.1"
                     /translation="EADTKAIELNNGTLSLEVITTSNGQAQTSNFKHQTSNLSAHLDA
                     KLIEFPLVLRRWKKGDYFYPLGLKRHKKKLSRFFIDQKISKTEKENIRVIEMNKKILW
                     VIAHRIDERFKVTDSTKEILKISFKPA"
     gene            complement(987..2021)
                     /locus_tag="VEV83_12670"
     CDS             complement(987..2021)
                     /locus_tag="VEV83_12670"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HYK46021.1"
                     /translation="MQTGAEIMKEELVDDLYERKSFKVDAGQEPVRIDKWVQHRIENA
                     SRNKIQQAIEAGFVTVNGKQVKSNYKIKPGDEILLMSLVNPEYTEVRPENIALNVVYE
                     DEDVMVLNKPPNLVVHPGVGNYTGTLLNGIAYHLLQQNPTLTEDDLPRYGLVHRIDKN
                     TTGLIVCAKTVESAAHLAKQFFNHTVSRKYIALVWGNMENNEGVIEAHVGRHQRHRKM
                     FNAYPEGETGKHAITHYTVIERFHYVTLVACQLETGRTHQIRVHMKHIGHTLFNDAEY
                     GGDKILKGTVYNKYKQFVENCFEICPRIALHAATLGFVHPRTGKEVFFEAPLPDDMRL
                     LIDKWRSYVS"
     gene            2077..2787
                     /gene="lipB"
                     /locus_tag="VEV83_12675"
     CDS             2077..2787
                     /gene="lipB"
                     /locus_tag="VEV83_12675"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HYK46022.1"
                     /translation="MREIVLQDLGLMPYKTVWDYQEHLLQQKITAKRNSTSEPDHLLF
                     VEHPPVYTLGKNGNEKNLLVTEHILKEKGIEYYHINRGGDITFHGPQQLVSYPILDLD
                     NYKPDLGWYLRSLEEVIILTMQEYGLKGERSEGETGVWIDASIKGRERKICAMGIRCS
                     RWITMHGFAFNVNVDLNYFNLITPCGIQNKQVTSLEKELGKKISMKEVKEKVVRNFER
                     IFHARIAISNERALIQNV"
     gene            complement(2957..>4421)
                     /locus_tag="VEV83_12680"
     CDS             complement(2957..>4421)
                     /locus_tag="VEV83_12680"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ELWxxDGT repeat protein"
                     /protein_id="HYK46023.1"
                     /translation="TELLNDLVSGEAGFFIHDFLSKNNAVYLVAVSSSNNSLYNSGNK
                     YSIYKTNGTKNSLRKITPDYSNIQSFNVGDNGLVFYVRYNYPVYELWRTDGTDAGTLL
                     LSSTLYSSNYLNVIGNTALFVAGDAVNGYELWKSDGSVAGTKMAKDINPGIGNSSPKG
                     MFIYKNEVYFAAYDGVHNSLWKSNGTKSGTIKVKEIDPYWNYTVTSTARYNFEISNNM
                     LFFAAIDTSNLKGAQVWKTDGTTAGTQVVKDINPTATSNYPNPSYFTDVNGTVFFVGD
                     DGQHGKELWKTDGTKEGTQLVKDITPGIDASNLNSLTSFAGRLYFQYAVDGWYYLWTS
                     DGTPGGTHEVEDAGIVNVKIANGAMLASDNKLFLSGITSQYGMELYVGTIEGESIKFA
                     KSITANEKTSVLNAVLYPNPATDVLNVKIESANTSKMNLVVMDFSKRIWITKAVELSQ
                     GTNNVQLSIHNLPAGTYFLKIINTDGSENAMMKFVKP"
BASE COUNT         1293 a          944 c          910 g         1274 t
ORIGIN      
        1 gaagctgaca caaaagctat cgaacttaat aacggaacgc tatctcttga agtaatcaca
       61 acttcaaacg ggcaggctca aacatcaaac ttcaaacatc aaacttcaaa cttatccgca
      121 cacctcgacg cgaaacttat cgaatttcct ctggttcttc gaaggtggaa gaaaggagat
      181 tatttctatc ctcttggatt gaaaagacat aaaaaaaagc ttagccgatt ttttatcgac
      241 caaaagattt caaagaccga gaaagaaaat attcgcgtga ttgaaatgaa caaaaaaatt
      301 ttatgggtga tcgcccacag aattgacgag cgtttcaagg tcacggattc caccaaagaa
      361 attttgaaaa taagcttcaa accagcatag atctcgcaaa gcgttgccca caaaggcaca
      421 gagcacataa agggaagttt aggaattcca ttgcagattc gtcgacatgg tataaaacaa
      481 ctttgtggcc ttgagtgctt ggtgggaacc aacaaaagcg ttgcccacaa aggcgcagag
      541 cacacaaagg aaagctttaa aattccgttg cagagcggcc tttcgtccgc atggcataaa
      601 acaaactttg tggcctttgc gtgctttgtg ggagacgaca accgtttccc gcaaagccca
      661 ctcaggacac gaagaataac ttcaagtccg ttgcagagcc gacacgtaac acaactttgt
      721 ggccttcgag tgcttcgtgg gagacgacca accgtttccc gcaaagccga ctgaggacac
      781 gaagaatagc ttcacatccg ttgcagagct gacatgtaac acacaacttt gtagtcttcg
      841 agtgcttggc gggaaaagca agcgtttgcg cacagaacag aaagcaacac ttcataattc
      901 ctttgcgagc ggtctttcat caacattcta taaaacaact ttgtggaatt tgcgtgctcc
      961 gtgggaaaaa gctgcgtggg aaacgctcaa ctcacgtagc tccgccattt gtcgatcagg
     1021 agccgcatgt catcaggcaa tggcgcttca aaaaaaactt ctttacctgt tcggggatga
     1081 acaaagccga gcgtagctgc atgtaaagca attcgtgggc aaatctcaaa acagttctca
     1141 acgaattgtt tgtacttgtt gtaaaccgtt ccctttaaaa ttttatcgcc gccgtattcg
     1201 gcgtcgttga acaacgtgtg cccgatatgt ttcatatgca cacgtatctg gtgagtgcgc
     1261 ccggtctcta actgacatgc aacgagcgta acgtaatgaa accgttcaat gactgtataa
     1321 tgtgttatcg catgtttgcc ggtttcgcct tcagggtaag cgttgaacat cttgcggtgc
     1381 cgctgatgtc ttccgacatg cgcttcaata acaccttcat tattttccat gtttccccaa
     1441 acgagagcaa tgtattttcg tgaaactgtg tggttgaaaa attgcttagc cagatgggct
     1501 gcggattcga cggtctttgc gcaaacaatt agcccggtag tatttttatc gatcctgtga
     1561 acaagaccgt atcttggaag atcgtcttca gtcaatgtag gattttgctg aagaagatga
     1621 taagcgatcc cattcaacaa agtacctgtg taattgccaa cgcctggatg aaccactaag
     1681 tttggaggtt tattcagcac catcacatcc tcgtcttcat aaacaacatt caaggcaatg
     1741 ttttccggtc gtacttccgt gtattccggg ttcactaaac tcattaacag gatctcgtct
     1801 ccgggtttga tcttataatt actttttacc tgtttaccat ttaccgtgac aaatccagcc
     1861 tctattgcct gctggatctt attccggctg gcattctcaa ttcgatgctg aacccatttg
     1921 tcgatgcgaa caggttcctg gccagcgtcg accttgaacg actttctttc atacagatca
     1981 tcaaccagct cttccttcat tatttccgca cctgtttgca tgtctgcaaa aataaggtga
     2041 ttgaccgcgc tagatttttg atcgtaattt tacaggatgc gagagatcgt tttacaggac
     2101 ctgggcttga tgccatacaa gaccgtttgg gattaccagg agcatttgtt gcagcagaag
     2161 ataacagcga aaagaaattc aacaagtgaa ccggatcatc ttttgtttgt ggagcatccg
     2221 cccgtgtaca cactgggaaa gaatggcaac gaaaaaaatc tccttgttac cgaacatatc
     2281 cttaaagaaa aaggcattga atactatcat atcaacaggg gcggcgatat aacttttcat
     2341 ggtccgcaac aattggttag ttacccgatc ctcgatctcg acaattacaa accggatctc
     2401 ggctggtatt tacgcagtct cgaagaagtg atcattttga cgatgcaaga atatggtttg
     2461 aaaggcgaac gaagcgaggg ggaaacgggt gtttggattg atgcgagcat aaaaggaaga
     2521 gaacgcaaaa tttgtgcgat gggcatacga tgcagccgtt ggattacgat gcatggcttc
     2581 gccttcaacg taaatgttga tctcaattac ttcaatttaa ttacaccctg tgggatacag
     2641 aataaacagg tcacatcgtt ggaaaaagaa cttgggaaaa aaatttcgat gaaagaggtg
     2701 aaggagaaag tggtgagaaa ttttgaaagg atttttcatg cgagaattgc aatatcaaac
     2761 gaacgagcgc tcattcaaaa tgtttagcgc tctcgcaaaa ataacctgtc aggtctgaaa
     2821 gtcctgacag gtttgatttc attgccaata gcaaataaag tcagaattta gttttgactg
     2881 gtttttaatt ttcgttgagt gattgttgat aacaaagtgt tctgcacttc cttcgaggtg
     2941 cagaacactt aaaaacttac ggtttaacaa acttcatcat tgcattttca ctaccatctg
     3001 tgttgattat ttttaggaag taagtgccgg caggcaggtt gtgtattgaa agctgaacat
     3061 tatttgttcc ctgcgacaac tcaactgcct tggttatcca gattcttttt gaaaaatcca
     3121 ttacgacgag attcatcttg ctggtgttcg ctgattcaat ttttacattg agaacatcag
     3181 ttgcaggatt gggataaagc accgcgttga gcacagatgt tttttcattt gcagttatcg
     3241 acttcgcaaa ttttatcgat tcaccttcta tcgtacccac atataattcc atcccatact
     3301 gagaggtaat tccggacaaa aacaatttgt tatctgaagc gagcatggct ccatttgcaa
     3361 tcttaacgtt tacgataccg gcgtcttcaa cttcatgtgt gcctccaggt gtgccatcgg
     3421 aagtccagag gtaataccaa ccatctacgg catattgaaa atataacctt cctgcaaaac
     3481 ttgtgaggct gttcagatta ctcgcatcaa ttcctggggt aatatctttt acaagctgag
     3541 taccttcttt tgtaccatct gttttccaaa gctctttgcc atgctgacca tcatcgccaa
     3601 caaaaaatac agtgccgttt acatctgtaa aataacttgg attgggataa tttgatgtgg
     3661 ctgttgggtt aatgtccttt accacttgtg tgcccgcagt agtgccatca gttttccaaa
     3721 cctgggcacc ttttaaattt gaagtatcta ttgcagcaaa gaatagcatg ttgtttgaaa
     3781 tttcaaaatt gtatcgtgct gtggaagtaa cagtgtaatt ccaataagga tcaatctctt
     3841 tgacttttat agttccgctt tttgttccat tagatttcca caagctatta tgcacaccat
     3901 cataagcggc aaaataaact tcatttttgt atataaacat tcccttggga cttgaattac
     3961 caatgccggg atttatgtct tttgccattt tagtgcctgc aacgcttcca tcgctcttcc
     4021 ataattcgta accatttaca gcatcacctg caacaaataa agcggtattg ccaataacat
     4081 taagatagtt ggaggagtaa agtgttgatg acagtaaaag agttcctgca tctgtgccat
     4141 cagtgcgcca aagctcatac acagggtaat tgtaccgcac atagaacaca agtccattat
     4201 ctcctacatt aaaactttgt atattgctgt aatcaggtgt tattttgcga aggctattct
     4261 ttgtaccatt tgttttataa atggaatatt tattacccga attatacagt gaattattac
     4321 tgctgcttac agcaaccaaa tagacggcgt tattttttga taaaaaatca tgaatgaaaa
     4381 aacctgcctc gccagatact agatcgttca gcaactccgt t
//
LOCUS       DASQJI010000454         6677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1589391,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000454 DASQJI010000000
VERSION     DASQJI010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6677
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589391"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3364
                     /locus_tag="VEV83_12685"
     CDS             <1..3364
                     /locus_tag="VEV83_12685"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK46024.1"
                     /translation="FKVTLLEPPVLIRADFHIKGWSPDLIYEFGEPFGNKSTTALFQD
                     SNGFMWIGTEKGLYRYDGQNLFLYTQVPLAIFLSEDNEGQIWASMGNSNGICVINQKA
                     GILKRLTTANGLANNSIARIVTDSQNRIWAVNFPDSDTGHFGINIIDEKNESIKWFDQ
                     GRATDNGDIRIFLDNQKNIWIANTLKGVKFIDLKSGKVKYINKNAGLRSDTTFRMFQD
                     RRNRMWIAEIAQIDAIDIYKKTITHYDLGRFIPTAITGDDNGNIWVAATSLFNEPAGI
                     KIISPDKKLLKTLNATNGLNSSEITNLYKDRQGQIWIAHNHGLNEVNTNNGSLLQHEG
                     EVDVTDLKQDDAGRIWIGTLSGVWILDTTTKLVKIVNTKNGLSGNTVNSMYVVNDKIC
                     IVTDKGVDIADWREKTIKHFGRTEGLPGNPLLITAEVPNDNTNNIWLLTNDNPGVGVD
                     VLDLGKNIVQHLNVDHDLRETSLTGLGHDRQGNIWLAYHTGGVVMIDALNKKISYFKD
                     DPRMDEHYNKIVLGDAAGNVWIGTDKGIFVINAARDSLTKLSVNEGLISDRIISLNEH
                     GGQIYAGTMGGITIITPPSSSNSVWKFQSFGRDQGIVKSGTGYSSDLITKDGKFLWGD
                     KGITTLTANGSPRIQAKTEISGLSVFNQPQLFSNEPWTYLDEKDTLWGNRNSFYTGGS
                     LPSSISIPNKGAVEFDSVSGYYNMPVNLSLPHDQNYLQFHFAQIHGNTSDTTWYRYIL
                     EGASKKWSDRTYLPVSENYLNLSPGNYTFKVSSFYNGVWTEPAEFSFEIRLPWWKNWW
                     AYCLYAFALFTIVALAVQYRSRKLVAANVALEEKINRRTAELKQSLQDLKAAQTQLIQ
                     SEKMASLGELTAGIAHEIQNPLNFVNNFSEVNGELISELVDEVDKGNYEEVKVIAVSI
                     KDNEEKIRSHGRRADTIVKGMLQHSRVSSGQKEPTDINALADEYLRLSYHGMRARDKS
                     FNATLETDFDQSIGKINIVPQDIGRVLLNLFNNAFYAVCEKSKNPEGFQQDLTGSSNL
                     SGQQPYVPRVTVVTKKLDNKILISITDNGPGMQQNIVDKIFQPFFTTKPTGEGTGLGL
                     SLSYDIIKAHGGEIKVETKEAEGTEFIINLPV"
     gene            3491..4585
                     /locus_tag="VEV83_12690"
     CDS             3491..4585
                     /locus_tag="VEV83_12690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46025.1"
                     /translation="MRIYSLLLYLPLNCLLCFPTVKIKAQASPAADSVRRPAGLFDND
                     SILTIRLSGNIRELMNDRADVSQLHPLVLSYRAEDGTEVPVSIQAKTRGHFRKTMGDC
                     TYPPISLQFSKSDTLSSSIFWDQNKLKLVMPCQGEDYVVREWLVYKAYNLVTLKSFRA
                     RLVKVELNDTKKNKVTPGFYGILLEEDQQVAARNNDVVIKRILRPEQTDPPAFLKMAM
                     FEYLIGNTDWSVQYQNIKLLATDTNSVATPVPYDFDHAGIVNAPYAKPADELEMSSVR
                     QRRYRGFCVEDMARFDEAIAAFDVIKADIYKLYTDCPFLDEKYIKATVQYLDAFYKTI
                     NDPVAFKKEFSYPCDKNGTGNVVIRGLKPE"
     gene            4947..>6677
                     /locus_tag="VEV83_12695"
     CDS             4947..>6677
                     /locus_tag="VEV83_12695"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK46026.1"
                     /translation="MSVNRRANHFHAFLTGISLLVLTFNSFSQYNIQGKITNENGAPL
                     PFASVTEKGGSSGTTTKEDGSFTIDVTSTRATLIVSYVGYETKEVSVNNQLFVSVALL
                     AAGNSLDSVAVIGYGTARKKDLTGAVSSVSEKNFNKGIYTSPDLLIQGKVAGVQVMSN
                     DGSPGGATTIKIRGNSAITGTGQPLFVVDGVPLDGRSLERDVNPLNFLNPIDIASIDI
                     LKDASATAIYGSRAAYGVVIINTKKGQTGEAKIDVAVSAGVSSALKTIDVLNASQYRE
                     AIKYYGVDNSFDKGGNADAQDAILQNGWQQNYSVAGSGGNDNGRYRFSAGYLNQDGII
                     INTGFKKYTSDFSANLKCLKSKKLGLDFHVNSSQYIQHGSDLSGGNGGSVFFALTWNP
                     TASLTNADGSLRMLPSEGANPIAYSQYAKENLKVTTILGSISPSYKFTNWLEYKVLLS
                     INYSSGISRSSTDQALGVYQFASPTGYASIANNELITEQITHTLNFNKDIFPNLNLNA
                     VAGYEYMKFTSQGFNLSANGAGNGFGNYGIDYTNYIQYSDQGSRNIASYLDPISELES
                     FFGRMIFNYKD"
BASE COUNT         2086 a         1334 c         1512 g         1745 t
ORIGIN      
        1 atttaaagtg acgcttctgg aaccgccggt attaataaga gcagactttc acataaaagg
       61 ctggtcccct gatttaatat atgagttcgg agaacctttc ggtaacaaat ctaccactgc
      121 tcttttccag gatagcaatg ggtttatgtg gattggcaca gaaaaaggat tgtaccggta
      181 tgatgggcag aacctgtttc tatacacgca ggtgccgtta gccatttttt tatcggaaga
      241 taacgaggga caaatatggg catcaatggg aaacagcaat ggtatttgcg tgatcaatca
      301 aaaagccgga atccttaaac gactcacaac cgctaacggg cttgcgaata atagtatcgc
      361 acggatagta acagactcac aaaatagaat ttgggcagtt aatttccctg atagtgatac
      421 aggtcatttt ggtataaaca tcattgatga aaaaaatgaa agcataaaat ggttcgacca
      481 ggggcgggcg actgataatg gcgacatacg catttttctg gataaccaaa aaaatatctg
      541 gattgcaaac acgctaaaag gagtaaaatt tatcgatctc aagtccggca aggtaaaata
      601 tataaataaa aatgctggtt tacgaagcga tacaacattc agaatgttcc aggacagaag
      661 aaaccggatg tggatcgcag agatcgcgca gatcgatgca attgatattt ataaaaaaac
      721 cattacgcat tatgacctgg gcaggtttat tcctaccgcg attaccggag atgataatgg
      781 gaatatttgg gtagctgcaa caagcctttt taacgagcct gccggaatca aaataattag
      841 ccccgataaa aagcttctta agactttgaa cgcaacaaat ggcctcaatt caagcgagat
      901 cacaaaccta tataaggata ggcaaggaca aatttggata gcgcataacc atggtttgaa
      961 cgaagtaaac acaaataacg gcagcctgtt gcagcatgaa ggtgaggtcg acgtaaccga
     1021 tcttaaacaa gatgacgcgg ggagaatatg gataggaact ctttcggggg tatggatcct
     1081 tgatacaacg acaaaacttg taaaaatcgt gaacacaaaa aacggcctta gcggcaacac
     1141 ggtcaattca atgtacgtag tgaacgataa aatttgcata gttactgata agggagttga
     1201 tattgcggat tggcgagaga aaacaatcaa acactttgga agaactgaag gattgccggg
     1261 taatccactt ttgatcacgg cagaagtacc taatgacaac acgaacaata tatggctatt
     1321 gacgaatgat aacccgggtg tgggcgttga tgtacttgat ctgggaaaaa acatagttca
     1381 acacctgaat gtagaccacg acttaagaga gacttcgcta accggcctgg gacacgaccg
     1441 ccagggaaat atttggctcg cctatcacac aggcggtgtt gtaatgatcg atgctttgaa
     1501 taaaaaaata agctatttta aagatgatcc ccgaatggat gaacactata acaaaatagt
     1561 acttggagat gctgccggta acgtatggat cgggaccgat aaaggcattt ttgtgattaa
     1621 cgcagcaagg gattctttga caaagttatc ggttaatgaa ggtttgataa gtgatcgaat
     1681 tatttcttta aatgaacacg gaggccaaat atatgcaggt acgatggggg gaataactat
     1741 catcacgcct ccttcgtctt caaacagtgt gtggaaattc caatcgtttg ggcgggacca
     1801 gggaatcgtt aagagcggaa caggttattc atcagatctt atcactaaag acggcaaatt
     1861 cttatggggc gataaaggga taacaactct gactgcgaac ggtagtcctc gtattcaggc
     1921 aaaaactgaa ataagtggcc ttagcgtatt taatcagcca cagctttttt caaacgagcc
     1981 atggacatat ttggatgaaa aggacacgct ctggggaaat cgaaatagtt tctatacagg
     2041 tggcagctta ccctcaagca tttcaattcc aaacaaaggg gcggtcgaat ttgatagtgt
     2101 tagtggctat tacaatatgc cggtaaatct ttcgctccct catgatcaga attatctcca
     2161 atttcatttt gcgcagatcc atggtaatac cagcgatact acatggtacc ggtacatact
     2221 cgaaggagcc agcaaaaaat ggagcgacag aacctacctg cctgtcagtg aaaattattt
     2281 aaatctctcc cccggtaact acacatttaa agtatcatct ttttacaatg gagtgtggac
     2341 agagcccgca gaatttagtt ttgagatcag gttaccatgg tggaaaaact ggtgggcgta
     2401 ctgtttatat gcatttgctc tttttactat tgtagcactt gctgttcaat accgctccag
     2461 aaaattagtt gcggcaaatg tagcattgga agaaaaaata aatcgccgca ccgctgaact
     2521 aaaacaatcg ttacaagatt tgaaagcggc acaaacgcaa ctcattcagt ctgaaaaaat
     2581 ggcctcgctc ggtgagttaa ccgcaggcat tgcacatgag atccaaaatc ctttaaactt
     2641 cgtgaataat ttttcggagg tgaacggcga attgataagt gaactggttg acgaagttga
     2701 caagggaaac tacgaagagg tgaaagttat cgcggtcagc ataaaagaca acgaagagaa
     2761 aatacgatct catggcaggc gcgccgatac gatcgtaaaa ggaatgttgc aacattcgcg
     2821 cgtaagctca gggcaaaagg agccaacaga tataaacgcc ctcgcagatg aatatttacg
     2881 attgagttat cacggcatgc gggccaggga caaatcgttc aatgcaacac tggagaccga
     2941 ttttgaccaa tcgatcggaa aaataaacat cgttccgcag gatatcggaa gagtgttgct
     3001 caatttattc aacaatgcct tttacgctgt gtgcgaaaaa tcaaaaaacc ccgagggctt
     3061 ccagcaagac cttacgggat cttcgaacct gtcaggtcag caaccttacg tcccacgtgt
     3121 cacagtggtc acaaaaaaat tggataataa aatcttaatc tcaataacag acaacggccc
     3181 cggcatgcaa caaaatatcg ttgacaaaat ctttcaaccc ttcttcacta ccaaaccaac
     3241 aggcgaagga acaggattag gtttgagctt gagttacgat atcattaaag cacatggagg
     3301 agaaatcaaa gttgagacga aagaggctga gggaactgag tttataatta atctgcccgt
     3361 ataattactt ccctttcgtt tccggcggat tactggcagg ataatcttac cggggcttga
     3421 cgaaataaaa ggaatggaga gaacgcgatc tgccacctgt tttttttgta ccttaatcat
     3481 ttaattgact atgagaatat attcactgct gctttacctt ccgctaaact gcctgctttg
     3541 tttcccgaca gttaaaataa aggcacaggc tagtcccgca gcggattccg ttcggcgacc
     3601 agcagggttg ttcgataacg attcgatact tacgatcagg ttaagtggta atattcgtga
     3661 attaatgaac gacagggctg acgtttcaca gcttcatccg ctcgttctct cttacagggc
     3721 cgaggacggc accgaagtgc ctgtttccat acaggcaaaa acaagaggac actttcgcaa
     3781 aacaatggga gattgtactt atccgccgat ctcgctccaa ttttccaaaa gcgatacact
     3841 ctcgtcttcc attttttggg accagaataa attaaaactg gtgatgcctt gccagggaga
     3901 agattatgtt gttcgtgaat ggctcgtgta taaagcatat aacctggtca ccttaaaaag
     3961 tttcagggca aggctggtga aagttgaatt gaatgataca aaaaagaata aggtgacccc
     4021 gggattttat ggtatcctgc tggaagaaga ccagcaagtg gctgcaagga acaacgatgt
     4081 tgtgataaaa cgaatcttac ggccggaaca aactgacccg cctgcttttt tgaagatggc
     4141 catgtttgaa tacctgatcg gtaatacgga ttggtcagtg cagtaccaga atattaaact
     4201 gctggcgaca gataccaata gcgttgccac cccggtgcca tacgactttg atcatgcagg
     4261 gatagtaaat gcgccttacg caaaacctgc tgacgagctt gagatgtctt cggtcaggca
     4321 aaggcgttat cgcgggtttt gtgttgaaga catggccagg tttgacgaag ccatcgctgc
     4381 attcgacgtc ataaaggcag atatttacaa gctctacacc gactgtcctt ttctcgacga
     4441 gaaatatata aaagctactg tacaatattt ggatgcgttt tacaaaacca ttaatgaccc
     4501 tgtcgccttc aaaaaagaat tcagttatcc ctgcgataaa aatggaaccg gtaatgtagt
     4561 tattcgagga ttgaaacctg aataagatca aatttcggtg cgccagaaga aataatcgtc
     4621 agttgaggat gatctcgttt ctggcaattc ggtaggaaaa atttttcgtt taattatctt
     4681 ctcttgtatt taacgcgcag caatgccatt aatgtgatta caaaaacgaa cgagcgttca
     4741 aatgacggca gcctggtggc atgtatttac ctgccacatg aaacaacgat gcctgggagc
     4801 acaagacttt cgttaatagc aggcgaggaa taaattttgt attcttttca gaatgatagc
     4861 tgttcttcaa gttttttttg gattttgatc cgttgagttt aacttgtagt atgttatgtg
     4921 acacgatcga ttaaactaag ttgcttatga gcgttaacag aagagctaac cattttcatg
     4981 ccttcttgac cggtatctcc ctccttgtgt taacgttcaa ttcattttct caatataaca
     5041 tacagggtaa aatcacaaat gaaaatggag ctcctttgcc atttgcaagc gttacggaaa
     5101 aaggaggatc ttccggcacc accacaaagg aagacggaag ttttacaatt gatgtcacct
     5161 caacaagggc gacactgatc gtatcatatg taggttacga aacgaaagag gtttcggtaa
     5221 ataaccagtt gtttgtttca gttgccctac ttgctgccgg caattcactg gacagcgtcg
     5281 ccgtgatcgg ctatggtact gcaaggaaga aagaccttac cggcgccgtt agctccgttt
     5341 ccgaaaaaaa ttttaataaa ggaatttata catctcccga tcttttaata caggggaaag
     5401 ttgccggcgt acaagtaatg agcaatgatg ggtcgcccgg cggcgctaca actattaaga
     5461 ttaggggcaa ttccgctatt accggtacgg gacaaccgct attcgtggta gacggggtgc
     5521 cgctagacgg aagatctctc gaaagggatg ttaacccact caattttctt aacccaatcg
     5581 acattgcctc aatcgatatt ttaaaagatg cttctgcaac tgccatttat ggctcaaggg
     5641 ccgcgtatgg agttgtcatt ataaacacta aaaaaggtca aacgggcgag gcaaaaattg
     5701 atgtggcggt ttcggcgggc gtttcatctg cgctgaaaac gatcgatgtc ttaaatgcgt
     5761 ctcagtaccg ggaagcaata aaatattatg gcgtggataa ttcttttgat aaaggcggga
     5821 atgcggatgc ccaggatgca attttgcaaa atggctggca gcagaattac tctgtcgctg
     5881 gtagcggcgg taatgataac ggtagatatc gtttttccgc aggatatcta aaccaggatg
     5941 ggatcattat aaatactggt tttaaaaaat atacatctga tttttctgca aatttgaaat
     6001 gcctcaagag taaaaagtta gggctggatt ttcatgtgaa ctcgagtcaa tacatacagc
     6061 acggttctga tctcagtggc ggaaatgggg gatcagtgtt ttttgcactt acatggaatc
     6121 caactgcttc actcacaaat gcggatggtt cccttcgaat gttaccgtct gaaggcgcaa
     6181 atccgattgc atattcacaa tatgcaaagg aaaatttgaa ggtaacgacc atccttggaa
     6241 gcatttctcc ctcttacaag tttacaaact ggcttgaata taaagtactg cttagcatta
     6301 attatagttc cggtatttca cgatcttcca cagaccaggc gctgggggtt taccagttcg
     6361 cttcgccaac cggatatgcg agcatagcaa ataatgaact tattaccgag caaatcacgc
     6421 acaccttgaa ttttaataag gacatttttc ctaacctcaa cctaaatgca gtggcgggat
     6481 atgaatacat gaagttcact agtcagggtt ttaatttaag cgcgaacggc gccggcaacg
     6541 ggtttgggaa ttatgggata gactatacaa attatatcca gtattctgat cagggcagcc
     6601 gcaatattgc ttcctacctg gatcccatat ctgaactaga atcctttttt ggcagaatga
     6661 tctttaacta caaagac
//
LOCUS       DASQJI010000455         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2204227,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000455 DASQJI010000000
VERSION     DASQJI010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2204227"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            485..1381
                     /locus_tag="VEV83_12700"
     CDS             485..1381
                     /locus_tag="VEV83_12700"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYK46027.1"
                     /translation="MMMLFKKHPLLTYYFVTFLISWGGVVVASGGPGQISSRKSDLPF
                     LPLYFITVAGPMFASLLLTGLYNGKKGYRELRSRLFKWRVPAKWYAVVLLAAPVSVFV
                     ALFALTLSSPAFMPGIFSSGNNPVALAFGLPGDNKIIFLLFVLGLGLFNGFVEEVGWT
                     GFATPRLRLNHHLIASGLNLGIMWGLWHLLSNFIGSDEAAGAVPLPLYLSVMLFSFLP
                     PFRILMAWVYEHTGSLLIGVLMHASLDAFWIVSMPVAITGAERMNWYIAWAAVLWGFV
                     AIVGFATKNVLLSKSRKFAVNH"
BASE COUNT          415 a          313 c          362 g          478 t
ORIGIN      
        1 gaagggtgaa agaacacaac cgcggaaaag aaaagtttac tgctacagga atgccgtgga
       61 cactggtgta cagaaaacaa tttgaaggaa tcagagaagc aaggcagaga gagtactata
      121 ttaaaaaaat gaaaagcaga aaggttattg aatctttaat acaaacagct gaatagagca
      181 tcccgatttc taatcgggag ggtcattggt ttgaatgctg tccggatcac taaaaagtct
      241 gcgtcgtgca gacttttctt tacatgccgg cttactgctg taactttctc ctaccgatga
      301 aatgtgtaat cgcgcttcaa gtaaaaatgg actttacaat gctgcactaa tgaaacaaag
      361 agagttggct gatgtaagtc atatgttttc gtgcgcatca tcatcacttg actcagcgtt
      421 ttaaatcaat tttgttttat gcaaaggaat tgatgtttga aggtactccc attcaaaaat
      481 cacgatgatg atgttgttta aaaagcatcc actgttaact tattactttg tcacatttct
      541 tatttcctgg ggcggagtgg tggtggcttc aggcggtcct ggccagatca gttcaaggaa
      601 aagcgatctt ccttttttgc cattatactt tataacagta gccggcccca tgtttgcatc
      661 cctccttctt accggcttat acaatggaaa gaaaggttat cgcgaattgc gttcccggtt
      721 gttcaaatgg cgtgtgcctg cgaaatggta tgcagtcgtt cttttagcgg ccccggtttc
      781 tgtgtttgta gcactgtttg ctctaacctt aagctcgcca gcattcatgc ctggtatatt
      841 cagttccggt aataatccgg ttgccctggc atttggttta ccgggcgata ataagattat
      901 ctttctgctg tttgttcttg gccttggact ttttaatggc tttgtcgaag aggttggatg
      961 gacaggattc gcaacaccaa gactacggtt gaatcaccat cttatcgcat ccggtcttaa
     1021 cctgggtatc atgtgggggc tatggcatct gctttcgaat tttatcggaa gtgatgaagc
     1081 agccggggca gttccactgc cgttatactt gtccgtaatg cttttttcct ttctaccacc
     1141 ttttagaata ctgatggcgt gggtatatga acataccgga agtttattaa taggcgtatt
     1201 aatgcatgca agtcttgatg cattttggat agtgtccatg ccggttgcaa taacaggagc
     1261 agaacgcatg aactggtata tagcatgggc tgctgtgctt tggggattcg ttgcaatagt
     1321 tggtttcgca acgaaaaacg tgctgctatc taagagccga aaatttgcgg ttaaccacta
     1381 gtaggcagaa tgaattcgac aatagttacg acatattata attagcaacc cgctcagcaa
     1441 tgagttcttt cagcaactta aagtccacgg gttttggcaa cagatcgtct gctcctaaac
     1501 ttttgcagcg atcataattt tctttgtcgc cgtatgcagt gatcatgatc acacccggcg
     1561 atggatct
//
LOCUS       DASQJI010000456         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_208109,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000456 DASQJI010000000
VERSION     DASQJI010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208109"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1791)
                     /gene="hypF"
                     /locus_tag="VEV83_12705"
     CDS             complement(<1..1791)
                     /gene="hypF"
                     /locus_tag="VEV83_12705"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HYK46028.1"
                     /translation="MPYERHLTTMSHFHQCAQCLDEYRDANDRRYFSQTNSCASCGVH
                     LSLHSRLNGDVVTDNKTMLASLLLAFASGETIAVKGIGGFLLMCDASNKNAIDTLRKR
                     KHRPRKPFAVLFPDAQQVKTCAYANAAALKMLQGETSPIVLLQAKQKCFEELDMHGIA
                     PGLSTIGVMLPYAPLLEWIITKWQKPLVATSGNLSGSSIVFQSAKKDELFQFADHILD
                     HDRDILVPQDDSVVRFAERSGQQIMLRRSRGLAPAMILQSAKTKTGETIFAAGAMLKS
                     AFAIQDNNQIYLSQFLGNLDSYDTQENYRHTFEHFQQLLKARPEIILADLHPDYPSTR
                     FAEEYAERWKAPLKRIQHHEAHFAAILGEHNLFPNRDKILGVIWDGTGLGTDGNIWGG
                     EFFIYENGTMRRAYHLESFPNVAGDKMANEPRLAASAIFNGVEAADTILSEKFSKQES
                     EYYAKVIGHEHLRNTSAGRYFDAVASVLGLVDINSYEGEAALMLEQSAYNYFCNDQLM
                     NAHYFTDEISSPSIPMKNVKQRIIEDIVAGRNIGEISAAFHNTLAMIISKVAIKERVR
                     KVAFSGGVFQNALLVDLVNLQLSKSFELYFH"
BASE COUNT          465 a          433 c          364 g          534 t
ORIGIN      
        1 atgaaagtat aattcgaaac tcttcgataa ttgtaaattt actaaatcca ccaatagagc
       61 attctggaaa acgcctccgc taaaagcgac ctttcttacc ctttctttga tcgccacttt
      121 ggaaatgatc atcgccagcg tgttgtgaaa tgcggcagat atctctccga tatttcgtcc
      181 ggcgacaatg tcttcaatga ttcgctgttt cacatttttc atcgggattg aaggactgct
      241 gatctcatcg gtaaaataat gcgcgttcat cagttgatcg ttgcagaaat aattgtatgc
      301 tgattgctcc agcattaatg ccgcttcacc ttcataacta tttatgtcca caaggccgag
      361 cacagaggca acagcatcga aatatctgcc ggcacttgta tttctcaaat gttcgtggcc
      421 gatcactttc gcgtagtatt ctgattcctg ttttgaaaat ttttcgctaa gaattgtatc
      481 tgcggcttcg actccattga aaattgcaga cgcggccaac ctgggctcgt ttgccatttt
      541 atcacccgcg acattcggaa atgactccag gtgataagcc cgccgcattg ttccgttttc
      601 ataaataaag aattccccgc cccaaatatt tccgtcggtt cccaggccgg ttccatccca
      661 tatcacgcca agtattttat ctctattcgg aaataaattg tgttccccaa gtatcgctgc
      721 aaaatgtgct tcatgatgtt gtattctttt taatggcgcc ttccatcgct cagcatattc
      781 ttccgcaaag cgggttgagg gataatcggg gtgcaagtca gcgagaatta tttccggacg
      841 cgcttttaat aactgctgaa aatgctcgaa tgtatgcctg taattttcct gcgtatcata
      901 actatcgaga ttccctaaaa attgcgataa ataaatttga ttgttgtctt gaatcgcgaa
      961 cgcgctcttc agcatggcgc ctgcagcaaa tatcgtttcg ccagtttttg tttttgctga
     1021 ttgaagaatc attgcaggag ccaaccccct tgagcgacgt agcatgatct gttgtccgct
     1081 cctttcagca aatcggacaa cactgtcatc ctgcgggacc aggatgtcac ggtcatggtc
     1141 aagaatgtga tcagcaaatt gaaacaactc atcttttttt gctgactgaa aaacaattga
     1201 ggagccgctt aaattaccac tcgtcgcaac caatggcttt tgccattttg taatgatcca
     1261 ttccagcaaa ggcgcatacg gcaacattac accgatcgtt gacaatccag gcgcgatccc
     1321 atgcatgtct aattcttcaa aacacttttg ttttgcctgc agaagcacga tcggtgaagt
     1381 ttcaccttgt aacattttta aagctgctgc atttgcatag gcgcaggttt tcacttgttg
     1441 tgcatccgga aacaacaccg caaacggttt tcgaggacgg tgttttcttt tacgaagcgt
     1501 gtcgatcgca ttcttatttg aggcatcgca catcaataga aaaccaccga tccctttcac
     1561 tgcaatcgtc tcaccactgg caaatgccag tagtaatgaa gcaagcatcg tcttgttgtc
     1621 agtaactaca tctccgttta gcctggaatg caatgacaag tgaactccgc aacttgcgca
     1681 cgaattcgtt tgtgaaaaat accggcgatc gtttgcatca cggtattcat ccaggcactg
     1741 cgcgcattga tgaaaatgac tcattgtcgt gagatgcctt tcatacggca actctg
//
LOCUS       DASQJI010000457         5320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1589547,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000457 DASQJI010000000
VERSION     DASQJI010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5320
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589547"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VEV83_12710"
     CDS             complement(<1..747)
                     /locus_tag="VEV83_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK46029.1"
                     /translation="MDQPIIFVVDDDVQVLRAITRDLKNKFRHDYRILSTSSPKEILD
                     SLLELKNKGETVAMFISDQRMPGIEGVDFLAQAMEFYNDAKKVLLTAYSDTDAAIKAI
                     NTVKLDYYLTKPWDPPEEKLYPIVEDLLDDWQNDFQPEFKGIKVTGYQFSPGSHSVKE
                     FLAGNLIPYQWLDATSDDGRQLIELNNLEAKDLPAIFFEDGTMLLNPQIIDLAKRIGL
                     KPEVKNEVYDVVIIGAGPAGLAASVYGSSEG"
     gene            complement(766..2151)
                     /locus_tag="VEV83_12715"
     CDS             complement(766..2151)
                     /locus_tag="VEV83_12715"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46030.1"
                     /translation="MKAPTIPDMKVVPEFQAVPDDQLQWLINQGETADVEKGDLLFNV
                     GAPVDTCFIVLAGKMRICAVQSGTEKELRILHPGQATGYLPYSRATVTPVFCEALEKT
                     WVFRCTAAKLKTGTGDHYQLYEAMVHMMLSRVREFTSIQQQNEKMFALGKLSAGLAHE
                     LNNPAAAISRAAALLEEQVSQLRTLFKKISGLNIEHEKIEKISGLINDKLNVPSASLT
                     MMQKASREDEINKWLSDNNIKDDDVEGLVERGFTTEELEVFKACSSTQELPVLLEWIN
                     NVLVTNKLTDDIRTSSERISDLVGAVKNFTFMDKDANRQMVDIHNGIRNTLIMLNYKL
                     KKANINVIENYDQSMPRIYALPGALNQVWTNIIDNAIDAMEVNNKGNLEITTNHDARF
                     VKVYIKDDGPGIPKESQQNIFAPFFTTKEMGKGSGLGLDVVSRIMIQHNGAVTVNSEP
                     GATQFEICLPI"
     gene            complement(2335..3750)
                     /locus_tag="VEV83_12720"
     CDS             complement(2335..3750)
                     /locus_tag="VEV83_12720"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK46031.1"
                     /translation="MRKLVFVILFFGSITALAQSNYVDSLKAKLSTATRSLDSFSIIV
                     KISEFNFVLGGGEADKTTIIRLLSIAQKLKNDSLLAISYNWIGSYFAFTKGDNTAALE
                     YYFKALPLAQKAKDRRRVSSLYFDIALVYFTLQNREEAVKNLRRGKENLPDPSSPMHL
                     FMLMQYQRGMSQYYILCHQNDSALNYTQQLSATSLKLKSLSFQYGALYLGSSVYTQMG
                     DKDMADVYFKKAVAMTPLITSSASRLNFYEIYIPFLFDNGNIHEAHNQASQLMELGLR
                     DNNNNIKLSAAGFLRQAFDSLHNIDSAYYYAKMKDALNDSIFSQNNINKIQAMEFNEQ
                     LRLMEGNARKAEEAVHRKQNIQYALISLGIIIFITLFLLLSRTIIVNERLISFFVILG
                     LLVVFEFINLLIHPWLASFTNESPVLMLLALVVIAALLIPLHHRLEQWIKEKVIRKNK
                     AIRLAAAKRTIEMLEKNAANV"
     gene            complement(4027..4935)
                     /locus_tag="VEV83_12725"
     CDS             complement(4027..4935)
                     /locus_tag="VEV83_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46032.1"
                     /translation="MNEDERTEINREDRKPEDTGRVHKKAQLVNDETSNVNEKAHERS
                     YITTSDKPNMEVHHPHHVTHKKKWTEYLLEFSMLFLAVFLGFVAENLRERQVENRREV
                     EYIRSLTADLDDDVHNLDSMIAFEETGLQQLDTLIDLLDNPSLAKQNGDEIYYVAREG
                     PREYPFPVNSRTLDQLKSSGGFLLIRNVGASNQVINYYNHYSPIKLLEDNYRLEFDDY
                     KRVAAKIFDPAILRRQENGVSDIMRSNDNPSLLNYDANLLKELGFHTVQMSGSRRSKL
                     RMLRVQKAEAVQLKSYLGEEYNLKNE"
     gene            complement(4928..>5320)
                     /locus_tag="VEV83_12730"
     CDS             complement(4928..>5320)
                     /locus_tag="VEV83_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46033.1"
                     /translation="KDPSLQKLFGDISVAINNVRYRNEQEYQFFANPVKPFILQHYDF
                     KWVDNVRKLSPNSKYLDLLNLYNKTDTIIKANILNLPTFKRDEATNMIMFYKTMLTSS
                     RTLQMNDYIKANAKILEVLRKDYDLKNE"
BASE COUNT         1407 a         1135 c         1049 g         1729 t
ORIGIN      
        1 accttccgat gaaccatata cagaagctgc taaaccagcc ggaccagcac cgatgatcac
       61 aacatcatac acttcatttt ttacttcggg ttttaagcca atgcgttttg ccaggtcaat
      121 tatctgcgga ttaagcaaca tagttccatc ttcaaaaaag atcgcgggga ggtctttcgc
      181 ttctaaatta tttagctcga ttaattgccg gccatcatcg ctcgtggcat cgagccactg
      241 ataagggatc aggttgcccg ctaagaattc ctttactgaa tgactgcccg gtgagaattg
      301 ataaccggtc actttaatac ccttgaattc cggttgaaaa tcattttgcc aatcgtcaag
      361 caaatcttca acgattgggt atagtttctc ttccggaggg tcccatggtt ttgtaaggta
      421 gtaatcgagc tttacggtgt tgatggcttt tatagctgca tccgtatcag aataagcagt
      481 aagcaaaacc ttctttgcat cattataaaa ctccattgcc tgcgccaaaa aatcgacgcc
      541 ttctatcccg ggcattcgct ggtctgagat gaacatggcc actgtttctc ctttgttctt
      601 cagttcaagc aggctgtcta aaatctcttt tggtgacgaa gtgctgagaa tacggtaatc
      661 gtgcctgaat ttatttttca ggtctctcgt gatagcgcgc aagacctgca catcatcgtc
      721 aacaacaaat attattggct gatccatatt attgcattca ctaaattaaa tgggaagaca
      781 aatttcaaat tgggttgcac ccggctccga attaacggtt acagcaccgt tatgctgtat
      841 catgatccgg ctaacgacat caaggccgag gcctgaccct ttgcccattt cctttgtcgt
      901 aaaaaaaggc gcaaaaatat tttgttggct ctcttttgga attccggggc catcgtcttt
      961 aatatacact ttcacaaatc tcgcatcgtg atttgtggtt atctccaggt ttcctttatt
     1021 gtttacctcc attgcatcaa tagcattgtc aatgatgttt gtccaaacct ggttcagtgc
     1081 tccgggaagc gcataaattc tcggcatgga ctgatcatag ttttcaatca cattaatatt
     1141 tgcctttttt aatttatagt tcagcatgat caatgtgttg cgtatgccat tatgaatatc
     1201 caccatttgc ctgttggcat ctttgtccat gaacgtaaaa ttcttcaccg cgcccacaag
     1261 atcagatatg cgctccgagg acgtgcggat atcgtcggtc agtttatttg taaccaagac
     1321 gttgttgatc cactcaagca atacagggag ttcctgcgtg gatgagcaag ctttgaaaac
     1381 ttccagttct tcagttgtaa aaccgcgttc caccaaccct tcaacatcgt catctttaat
     1441 attgttgtcc gaaagccact tgttgatctc gtcttcacgc gacgcttttt gcatcatggt
     1501 caatgatgcg gaaggaacgt ttagtttatc gttgataaga ccgctgatct tttcaatctt
     1561 ttcgtgctca atgtttaaac cagatatttt tttgaataac gtccgcaact ggcttacctg
     1621 ttcttccagt aacgcagccg cacgggatat tgcagcggca ggattattta gctcatgcgc
     1681 aagacctgca gaaagtttgc cgagcgcaaa cattttttcg ttttgttgtt gaatggaagt
     1741 gaattcacgc acccggctga gcatcatgtg caccatcgct tcatacaatt ggtagtgatc
     1801 tccggtgcct gtcttaagtt tagcagccgt gcatctgaac acccatgttt tttctaaggc
     1861 ttcgcaaaat acgggcgtaa cagtggctct tgaatagggg aggtagccgg ttgcctgccc
     1921 cggatgaaga atgcgcaatt ctttttcggt gcctgattgc acggcgcata tacgcatttt
     1981 accagctaat acaataaagc acgtatcaac aggcgcaccg acattaaaca aaagatctcc
     2041 tttctctaca tctgcagttt ccccctggtt aatgagccat tgcagttgat catcaggaac
     2101 agcttgaaac tcgggaacaa ctttcatgtc cggaatggta ggtgctttca tattttgcaa
     2161 ttctgatcag caatttatgt attgttacta aactaaaata cgctaaaaat actattatta
     2221 accggccgtg tttgaagtca ctaaatgttg aattcggatg cagtgatagt ggagaattaa
     2281 gcctggtcca agcttgtgct ttttttagat agggaataca ggccgtgttg gtctttaaac
     2341 attcgcagca ttcttttcca acatttcaat tgttctttta gccgctgcca accggatggc
     2401 tttatttttc ctgataactt tttctttgat ccactgttcc aaacgatgat gtaagggaat
     2461 aagcaatgcc gctataacga ccaatgctaa caacatcaag accggtgatt catttgtaaa
     2521 agaagcaagc cagggatgaa taagcaggtt gataaattca aacacaacca gcaaacctaa
     2581 aataacaaag aatgagatca gcctttcatt tacaataata gttctgctta ataataaaaa
     2641 caatgtaata aagatgatga tgcctaagct gattaatgca tactgaatgt tttgtttgcg
     2701 gtgcaccgct tcttcggcct tcctcgcatt gccttccata aggcggagct gctcattaaa
     2761 ttccattgcc tgtattttat taatattatt ctgactaaaa atagagtcgt ttagtgcatc
     2821 cttcatcttc gcataataat aggcgctgtc tatattatga agcgaatcaa atgcctggcg
     2881 caaaaatccg gcagccgaaa gttttatatt attattattg tccctcaagc ctaattccat
     2941 tagctggctt gcctggttgt gcgcttcatg tatgttacca ttgtcaaaca aaaaaggaat
     3001 atagatctcg taaaagttaa gcctgctggc gctgcttgta attaatggcg tcatagcaac
     3061 cgctttttta aagtaaacgt ctgccatatc cttatcgccc atttgtgtat aaacagaact
     3121 acccaggtaa agcgcaccgt attgaaatga aagacttttt agtttaaggc ttgtcgcaga
     3181 taattgttgt gtgtagttca gggcagaatc attttgatgg caaagaatat aatactgcga
     3241 catgccgcgt tgatattgca tcagcataaa caaatgcatg ggcgacgacg ggtcgggcag
     3301 attttctttg cccctgcgta aattttttac agcctcttcc ctgttctgaa gtgtgaaata
     3361 taccagcgct atatcaaaat agagagagct tacgcgtcgc ctatcttttg ctttttgagc
     3421 taacggcagc gctttaaaat aatattcgag agctgcagta ttatctcctt tagtaaaggc
     3481 gaaataagat ccgatccagt tatagctgat ggcaagcagc gaatcatttt taagtttttg
     3541 tgcaatggaa agaaggcgta tgattgtggt cttatcggcc tcgcctccgc ctagcacaaa
     3601 gttgaattcg gaaattttaa cgatgatact aaaactgtca agggaccttg ttgctgtgga
     3661 caacttcgct tttaggctgt caacataatt actctgtgcg agagcggtga tgcttccaaa
     3721 aaacaatata acaaaaacta attttctcat gttttgctct gtgagccttt attccaaatt
     3781 atcttttcaa ctaataaatt ctattggcct tgttgcctta tccccgttac gagcgattcc
     3841 ctataatcaa gtttcatttt attgtttaga attttttcgt tgatatgttc agggaaaaag
     3901 ccgactgtta taagaaaata tcgcgaggaa ttctaaaaaa tattcccttg aattttcgtt
     3961 gactcagcaa gagtttattt ctcttgttca ttatacagca ttgacgatct gattatcctt
     4021 tctttttcat tcatttttca aattatattc ctctcccaag tatgatttta attgaacggc
     4081 ttcagctttc tgcacccgca gcatgcgtag ttttgaacgt cgtgatccac tcatttgcac
     4141 tgtatgaaac cccaattcct ttagcaagtt cgcgtcgtaa tttaaaagag aaggattatc
     4201 attacttcgc atgatatcgc ttacaccgtt ttcctgccgt cttaatatgg cagggtcaaa
     4261 aattttcgca gctacacgct tgtagtcatc aaactcaaga cgataattgt cttcgagcaa
     4321 ctttatggga gaatagtgat tgtaataatt tatcacctgg tttgaagctc caacgtttct
     4381 tatcagcaaa aagccaccgg aacttttcaa ctggtccaat gtacggctat taacagggaa
     4441 cgggtattcc cggggccctt ctcttgccac atagtatatt tcatctccgt tttgttttgc
     4501 gagtgaaggg ttatctaata aatctatcag cgtatctaat tgttgaaggc ccgtttcctc
     4561 aaacgctatc atgctgtcga ggttatggac atcatcatcc aggtctgctg ttaacgacct
     4621 tatgtactca acttcacgtc tattttcaac ctggcgctcc cttaagtttt ctgcgacaaa
     4681 gccaagaaat acggcaagga aaagcataga aaattcaagc aggtattctg tccatttttt
     4741 tttgtgcgtt acgtgatgcg gatgatgtac ttccatgttt ggtttgtctg atgtggtgat
     4801 gtatgatctc tcatgtgctt tttcattcac gtttgacgtt tcatcattga cgagttgggc
     4861 ctttttgtga actcgtcctg tatcttccgg tttccggtct tcccggttta tttctgttct
     4921 ctcgtcttca ttcatttttc agatcgtagt cttttcgcaa tacttctaaa atctttgcgt
     4981 tggcttttat ataatcattc atctgcagcg tcctgcttga cgtgagcatg gttttgtaaa
     5041 acatgatcat gttcgttgct tcgtcccttt taaacgtggg caggtttaaa atgtttgctt
     5101 ttatgattgt gtccgttttg ttgtagagat ttaagaggtc caggtacttg gaatttgggc
     5161 tcagctttct tacattatca acccacttaa aatcgtaatg ctgcagtata aacggtttca
     5221 ccgggtttgc aaaaaactgg tattcctgtt cattacgata acgcacatta ttaatggcca
     5281 cgcttatgtc gccaaacaat ttttgcaatg aagggtcttt
//
LOCUS       DASQJI010000458         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1437531,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000458 DASQJI010000000
VERSION     DASQJI010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437531"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1623)
                     /gene="ade"
                     /locus_tag="VEV83_12735"
     CDS             complement(<1..>1623)
                     /gene="ade"
                     /locus_tag="VEV83_12735"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000034 - adenine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HYK46034.1"
                     /translation="VEGNLVDIKGKTIQTARIFVQGDHIYRVQIISEKRSERLPFIMP
                     GFIDAHVHIESSMLVPSEFARLAVVHGTVATVSDPHEIANVMGVDGVEYMIENSKQVN
                     FKFYFGAPSCVPATVFETAGGALDSTAVGLLLEKPEIHYLSEMMNFPGVLMKDEEVIK
                     KIALAKNFGKPVDGHAPGLRGEQARQYTQAGISTDHECFTKEEALDKLQYGMKIIIRE
                     GSAARNFEALIDLLNDYPDKIMFCSDDKHPDSLVDGHINELCARAVAKNIDIFNVLQA
                     ACINPVEHYKLNVGLLKEKDAADFIIVEDLKKFNVLQTYINGELVADNGKTLIKSIPV
                     DIINNFSALEITANELRVKQSDYPLVDGKMPVIEALDGQLITNKIFTAPVFENDQLLS
                     DPANDILKIVVVNRYSDAPVAKAFIKNFGLKKGAIASSVAHDSHNVVAVGVDDENITR
                     AANLVIKETGGVSCVDGETEKILPLPVAGLMSADDGYRVAESYTDIDKMAKALGSKLL
                     APFMTLSFMALLVIPHLKLSDKGLFDGDEFRL"
BASE COUNT          400 a          410 c          336 g          477 t
ORIGIN      
        1 atcaacctaa actcatctcc atcgaacaag cctttgtcgc taagctttaa atgcgggatc
       61 accaacagcg ccataaaact gagcgtcata aagggtgcta ataatttcga cccaagggcc
      121 ttggccatct tgtcaatgtc ggtgtaagac tcagcgaccc tgtagccatc atcagcactc
      181 attaaaccgg caaccggcaa tggaagaatt ttttcggttt cgccatcaac acaactcaca
      241 ccgccggttt ctttaataac aaggttcgca gctctcgtga tattctcatc atccacacca
      301 acggcgacca cgttgtgact atcgtgcgcc accgatgaag cgatggctcc ttttttcaac
      361 ccaaaattct ttatgaatgc ttttgcaaca ggcgcatctg aataccggtt aacaaccacg
      421 atctttaaaa tatcgtttgc aggatcggaa agaagctgat cgttctcgaa gacgggcgcg
      481 gtaaatattt tatttgtgat gagttggccg tccaatgctt caatcaccgg catttttcca
      541 tcgacgagcg ggtagtcgct ttgcttaact cttaattcgt ttgctgttat ttccaatgct
      601 gaaaaattat ttatgatgtc gaccggtatc gatttgatca aagtttttcc attgtcggcc
      661 accaattcac cgttgatgta ggtttgaaga acattgaatt ttttcaaatc ctctacgatg
      721 ataaagtcgg cggcgtcttt ttctttcagg agtcccacgt tgagtttata atgttcaaca
      781 ggatttatgc acgcagcttg cagcacgttg aaaatatcaa tattttttgc aaccgctctc
      841 gcgcatagtt cattgatatg gccgtccacc aaactgtccg ggtgcttatc atcgctgcaa
      901 aacattattt tgtccgggta atcgttgagc aggtcgatca atgcttcgaa attcctggca
      961 gcgcttcctt cacgaatgat gatcttcatt ccatattgca atttatccag cgcttcctct
     1021 tttgtgaaac attcatgatc agtcgatata ccagcttgag tgtattgcct tgcttgctcc
     1081 ccgcggaggc cgggcgcgtg cccgtcgaca ggtttgccaa aattttttgc aagcgcaatt
     1141 ttttttatca cctcttcatc cttcatcaat acgccgggga aattcatcat ctcacttaaa
     1201 taatgtatct cgggtttttc cagcagcaac cctacagcgg tgctgtcgag cgctccccct
     1261 gccgtttcga aaacagtcgc cggaacgcag ctcggcgcgc cgaaataaaa tttgaaattc
     1321 acctgcttgc tgttttcgat catatattcc acaccatcca cacccatcac attcgcgatc
     1381 tcgtgcgggt cgctaactgt tgccacggtg ccgtgtacaa cagcaagccg cgcaaattca
     1441 gagggtacga gcatgctgct ttcaatgtgc acatgggcat cgatgaatcc gggcatgata
     1501 aacggcagtc gctcactgcg tttttctgaa attatctgga cacggtagat atggtcacct
     1561 tgaacgaaaa ttctggcagt ttgtattgtt ttccctttga tatcaacgag gtttccttcg
     1621 acg
//
LOCUS       DASQJI010000459         2363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2358313,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000459 DASQJI010000000
VERSION     DASQJI010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2358313"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VEV83_12740"
     CDS             <1..438
                     /locus_tag="VEV83_12740"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYK46035.1"
                     /translation="AGHIGHTVINHEDDPDVTGMPGSLEDAIGNCTIQKRSLGKFNDT
                     HALLEAYKRGDDFARWVWLSSVRKLAIGIASVINILSPECVVMAGGITEAGDDLFQPL
                     ANFLSVYEWRPGGSSCLILKAHFGDMAGAIGAACFAMAQAANR"
     gene            472..1263
                     /locus_tag="VEV83_12745"
     CDS             472..1263
                     /locus_tag="VEV83_12745"
                     /inference="COORDINATES: protein motif:HMM:NF002805.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HYK46036.1"
                     /translation="MDVIHTYLSKCEAIIETIKAQHQQMSTAAKWFAESILTGRVVHM
                     FGSGHSRIMVEEMWPRYGSFPGFNPIVELSLTYHNNVVGANGQRQAMFLENVSGLAER
                     ILRNFSLDGKDTALIISSSGCNIVPIEMSELFQKKNIKVVAIVTKAHLETSTSKRSDG
                     KKLSDFADLVLDSGAPAGDSMIGIDGLATPVSPGSTVGGVIIVNSIKAEVARLLTQAG
                     KPPKVLTASAIVGDEQAKKLFESAYDEHAHRLAALFIDVGTETKE"
     gene            1369..>2363
                     /locus_tag="VEV83_12750"
     CDS             1369..>2363
                     /locus_tag="VEV83_12750"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46037.1"
                     /translation="MQPIPIRTTVVGSYPFPGWLEFATQNLNSFGAADIEEMIEDAVI
                     AAIHDQITAGLDVITDGEQTRLDFNLSFYGYIKGIRANETETRKFGPAAHDQRGKHDI
                     IDELIAPNGLGAVKEFLRLKKLAPQGPVLKASVPGPYTLSGRLLPNERYKDRYAITEA
                     LLPLIRTELEELVTAGCTEITVDEPSMSCYAYKEDTKRFVDIFNRTVKPVVGKCRLST
                     HMCFGNFKGRPVGYRSILPMLPDFLDLTVDEIHVEMANREFAEIELLQPFAEKMDVSV
                     GIVDVKNYYIESPDDVAKRIERCLKYVPAEKLSVAPDCGLSQTARWAARQKLMNMV"
BASE COUNT          661 a          497 c          603 g          602 t
ORIGIN      
        1 gcaggacata tcggccacac cgtgatcaac catgaagatg atcctgatgt aacggggatg
       61 cccgggagcc tcgaagatgc aattggcaac tgtactattc aaaaacgatc gctcggaaaa
      121 tttaatgaca cgcacgcgtt actcgaagcg tacaagcgtg gcgatgattt tgcaagatgg
      181 gtttggcttt cgtctgttag aaaattggcg atcgggatcg cttccgtgat caatattcta
      241 tcgcctgaat gtgtggttat ggctggcggt attacggagg cgggcgatga cctctttcaa
      301 ccgctcgcaa attttttatc ggtgtacgag tggcgacctg gagggagcag ttgtttgata
      361 ctgaaagcac attttggaga tatggcagga gcgatcggcg ccgcctgttt tgcgatggcg
      421 caagccgcca accgctaata accatctaac ctcacgcgaa aatttttttg aatggatgtt
      481 atacatacat atttgagcaa gtgcgaggca ataatagaaa cgatcaaagc gcagcatcaa
      541 caaatgtcta ccgcagccaa atggttcgcg gaaagtattt tgacaggaag ggtggtgcac
      601 atgttcggct ccggacacag caggattatg gtagaagaaa tgtggccgcg ttatggatcc
      661 tttccgggat ttaaccccat tgttgagcta tcgctcactt atcacaacaa tgttgttggt
      721 gcaaacggtc agcggcaggc gatgtttctg gaaaatgttt cgggcctggc cgaaagaatt
      781 ctccgcaact ttagtttgga tgggaaagat accgcgctta tcatttcttc gagtggttgc
      841 aatattgttc caattgaaat gtctgaattg ttccaaaaga aaaatatcaa agtagttgca
      901 attgtaacga aagctcattt ggaaacaagc acgagcaagc gaagcgatgg aaaaaaactt
      961 tctgattttg cagacctcgt tttagacagc ggcgcacccg caggagattc aatgatcgga
     1021 attgatggat tagccacgcc ggtatctccg ggttcaaccg tcggcggagt aattattgtg
     1081 aacagcatta aagccgaagt agcacgatta ttaacgcaag caggaaaacc gccgaaggtt
     1141 cttacggcat ctgccatcgt tggagacgaa caggcgaaga aattgtttga aagcgcttac
     1201 gatgaacatg cgcaccgttt ggccgcgttg ttcatagatg ttgggacaga aacgaaagag
     1261 taaggacaag actggttgga tctttcggac tttcctgact cttctgactt tcctctcttt
     1321 taccgctttc gcttcttact tttaattgtc gaaatcatat tacaacaaat gcagcctatt
     1381 cctattcgca caacagtggt cggcagttat cctttcccgg gatggcttga atttgcaaca
     1441 caaaatctga acagtttcgg tgcagccgat attgaggaaa tgattgaaga cgcagtcatt
     1501 gctgcgatac atgaccaaat aaccgccggc cttgatgtga tcaccgatgg cgaacaaacg
     1561 cggctcgact ttaatctctc gttttacggt tatataaagg gcattcgtgc aaacgaaaca
     1621 gagacacgaa aatttggccc ggctgctcat gatcagcgag gcaagcatga catcattgat
     1681 gaattgatag cgcctaatgg tttaggtgcg gtaaaagaat ttttgcgact aaaaaagttg
     1741 gcgccgcaag gacccgttct taaagcgagt gttccgggac cgtacacgtt aagcggaaga
     1801 ttattgccga acgaaagata taaagatcgt tatgcgatca ccgaagcatt gcttcctctc
     1861 attcgaacag aattagagga gcttgttact gcaggctgca ccgaaataac ggttgacgaa
     1921 ccttcgatga gctgctatgc atataaagaa gacacgaaac gatttgtcga tatcttcaat
     1981 cgaaccgtga aaccggttgt tgggaagtgc aggttatcga cgcatatgtg ttttggaaat
     2041 tttaagggcc ggcccgtcgg ttaccgcagc attctgccga tgcttccgga ttttctcgat
     2101 ctcaccgtcg acgaaattca cgtcgagatg gccaaccgcg aattcgcaga gattgaattg
     2161 ctgcaaccat tcgcagaaaa gatggatgtc tcagtcggga tcgtggatgt taagaactat
     2221 tacatcgaat cgccggatga tgttgcgaag agaatagagc ggtgtttaaa gtatgtacct
     2281 gcagaaaaat tatccgttgc accggattgt gggctaagcc aaacggcaag atgggcagcc
     2341 aggcaaaagc ttatgaatat ggt
//
LOCUS       DASQJI010000460         2261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2665830,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000460 DASQJI010000000
VERSION     DASQJI010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2665830"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..838
                     /locus_tag="VEV83_12755"
     CDS             80..838
                     /locus_tag="VEV83_12755"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK46038.1"
                     /translation="MRILIVEDELLLVKHLVKLLADVEPAAQIAGSTNSISATIAWLS
                     THDKPDLILMDIELADGQSFEIFEKMEVKSPVIFTTAYDEYALKAFKVSSIDYLLKPV
                     KETDLKRALDKLKNLRESGEQPGIQNVLDEMRRMKTSTYRERILVKAGQKMISIPMDD
                     VGMFFTNKSLNYLLTKTKQKYIVDQTLDEIEGSLDPKKFFRANRQHILAHHAINVVHP
                     WFNGKLKVEINLPTEEPVVISRDKASAFKEWLGE"
     gene            966..1607
                     /locus_tag="VEV83_12760"
     CDS             966..1607
                     /locus_tag="VEV83_12760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46039.1"
                     /translation="MSNGEAKMGEASKPRFEFRSFGQTFDAAAKRMARLSMPVPEKFW
                     ERHSDEIYIMSRTNDVNNTKIRDGKMDIKTLVQTVDGLEQWNPLMKGEFPMAVDILKN
                     QVFPAFQVRMPQLSQVQYGYDEFMSIIHEHPDLQAVRVHKQRSGYLVNDVICETGIVF
                     INGANVQTINLESTDVELIKQTIKAIGLEGVENINYLQAIKRVIGMIDKPLAN"
     gene            1623..2093
                     /locus_tag="VEV83_12765"
     CDS             1623..2093
                     /locus_tag="VEV83_12765"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HYK46040.1"
                     /translation="MPREIERKFLVTSEQFKAAAAKQTRITQGYLSSVPERTVRIRIK
                     GEKGFITIKGIGDASGASRFEWEKEMSLDDATELLKICEPGVIDKTRYEVKAGDHTVE
                     VDEFHGENEGLIVAEIELKGEDDQFEKPAWLGTEVTGDERYYNAMLMKNPYTKW"
BASE COUNT          727 a          476 c          525 g          533 t
ORIGIN      
        1 ttaaaacagg gcaatatcga cgttcaggaa accgcagaac agttccgggt tattattccc
       61 cttataaaaa caggaaacta tgcgcatact catagtggaa gatgaattgt tgctcgtaaa
      121 acacctggtg aaacttctcg ccgacgttga accggctgcg caaattgccg gaagcaccaa
      181 cagcatatct gcaacaattg cgtggttatc cactcatgat aaaccggacc tgatcctgat
      241 ggatattgaa cttgcagacg gacaaagctt cgagatattt gaaaagatgg aggtgaaaag
      301 tcccgtgatc ttcacgactg cttacgatga gtacgcgctg aaagctttca aagtaagcag
      361 cattgactat cttttaaaac ctgtgaagga aaccgatttg aaaagagcgc tcgacaaact
      421 aaaaaatctc cgcgaatccg gcgaacagcc cggtattcaa aacgtgcttg acgaaatgcg
      481 gcgcatgaaa acatcaacgt atcgtgaaag aattttagta aaagcaggcc agaaaatgat
      541 ctccattcct atggatgacg ttgggatgtt cttcacgaac aaatcactca attatcttct
      601 tacaaagacc aaacaaaaat atatcgtcga tcaaacgctc gacgaaatag aaggatcact
      661 tgacccgaaa aagttttttc gcgccaatcg ccagcatatt cttgcacacc atgcgatcaa
      721 cgtagttcat ccctggttta acggaaaatt aaaagtagag atcaatctgc cgactgaaga
      781 acctgtcgtg atcagccgag ataaagcatc agcgtttaaa gaatggttag gagaataaaa
      841 agaacttttg cgttttgcta ttgcttacga aaacagtatt ctactctctt tacgtctgtg
      901 aacatttgtg tttaatgaaa atgcaaatca ggtaacttta acctggagat caaactctgt
      961 tacatatgag caatggagaa gcaaaaatgg gcgaagcatc aaagccgcgg ttcgagttcc
     1021 gttcattcgg tcagaccttc gacgccgcgg caaaacgcat ggctcgtttg tcaatgccgg
     1081 taccggagaa attttgggag cgccacagtg atgagatata tatcatgtcg cgcaccaacg
     1141 atgtaaacaa cacgaagatc cgcgatggca aaatggatat caagacgctc gtgcaaactg
     1201 tggatggcct cgaacaatgg aatccactta tgaaaggaga atttccaatg gctgtcgaca
     1261 ttttgaagaa ccaagtattc cctgcttttc aggtcagaat gccgcagctt tcacaagtgc
     1321 aatacggcta tgacgaattt atgtcgataa tacatgagca tccggatctg caggcggtgc
     1381 gcgtgcataa gcaacgctcc gggtatttgg tcaatgatgt catctgtgag acaggtattg
     1441 tgttcatcaa cggcgcgaac gtgcaaacca tcaaccttga atcaacggat gtggagttga
     1501 tcaaacaaac tattaaggcc atcgggctgg agggagttga gaatatcaat tatcttcagg
     1561 ccattaaaag agtgatcggg atgatcgata aaccattggc gaactaacca aactttttgc
     1621 atatgccacg agagatagaa agaaagttcc tggtaacatc agaacaattc aaggctgctg
     1681 ccgcaaagca aacgcgcatc acacaaggct atttatcctc ggtgccggaa agaactgtgc
     1741 gaataaggat caagggcgaa aaaggattta ttacaataaa aggtattggt gatgcatccg
     1801 gcgcatcacg tttcgaatgg gaaaaagaaa tgtcgctgga cgacgcgaca gaactactga
     1861 agatctgtga gcctggcgtc atcgataaaa cacgctatga agtgaaggcg ggtgatcaca
     1921 cggttgaagt agatgagttt cacggcgaga acgaaggcct tattgtggct gaaattgaat
     1981 tgaaaggtga agatgaccag tttgagaaac cggcatggct tggaacagaa gttacaggag
     2041 atgagagata ctacaatgct atgctgatga agaatcctta cacaaagtgg tagttcaccg
     2101 gcagcacact gtcgttattt aaaacataac tatgacaagc aaagcatcca acatcaccta
     2161 ttggatctcg accattcttt tcgcgggact catgatcttc tctgccgccg gcggacttca
     2221 gccaacgcag caggcgatac aattaataca tgatcagtta g
//
LOCUS       DASQJI010000461         9863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1744295,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000461 DASQJI010000000
VERSION     DASQJI010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9863
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744295"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VEV83_12770"
     CDS             <1..650
                     /locus_tag="VEV83_12770"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK46041.1"
                     /translation="QEQQTNFNPPPTVPAQAETQPEVAENDEADATPIVTSPKPQVKK
                     QVAVENNDNKKVSTQTVVNPTPTPPKPKAVYAGGTSAGSGGNNADTYNNSRNQGIAGG
                     NGDQGKPNGNPNSDSYTGNGGTGTAGISITNGLQGRRISSSAHFQDAYKYGGKVSVDV
                     TVDENGSVTSARVKPGSPFADLNAIAVKRAYQLKFNKGDTPQSGTIQIIFQNPKG"
     gene            733..2958
                     /gene="purL"
                     /locus_tag="VEV83_12775"
     CDS             733..2958
                     /gene="purL"
                     /locus_tag="VEV83_12775"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HYK46042.1"
                     /translation="MEVTAKIAEELRLTEEEFELIKEKLGRTPNFTELCAFSAMWSEH
                     CSYKNSIKWLKTLPRTGGRMLVAAGEENAGLMDLGNGWGVVFKIESHNHPSAIEPFQG
                     AATGVGGIQRDIFTMGARPIASLNSLRFGNLSDLKTRRLLAGVVHGIGHYGNCFGVPT
                     VAGETYFEDCYSTNPLVNAMSVGIVTVDKTVSATAKGLGNPVFFVGSATGKDGIGGAS
                     FASANITEESAEDLPAVQVGDPFQEKKLLEACLEVIDTGTVVGMQDMGAAGIICSTAE
                     MSAKGGVGMRVDLDKVPTRQQNMHAWELLLSESQERMLLVAEKGREAEVIKVFEKWDL
                     PCTQIGEVTTDGLLKFYLHGKLEAEIPAKELVLGGGAPQYTREYKEPKYLEQVKAFKM
                     DDIEDIDKKDVKTLAEKIIQLPNIASKRWIYIQYDSTVGTANASTNAPGDAAIVLAKG
                     TGKALAVTTDCNGHYVFADPYKGAMIAVAEAARNIVCSGGEPIGVTNCLNFGNPYDPE
                     VYYQFVKAVEGMGEACRKFHTPVTGGNVSFYNQNPDGPVYPTPTIGMVGLLDDINNRM
                     TLDFKRAGDTIVLIGQQKNDIGCSEYLHAIKGVEFSPAPAFELDEEYAVQKFVASIIR
                     EKLVSSAHDLSEGGLIVALFESAFNRELGFAIDVEETTRRDAFWLGEAQSRVLISVAA
                     DKLAALKSKAASSGIDTTVLGKVTNGDLTVNGDNWGQVTDWKNLYDNAIGNMVTNENL
                     S"
     gene            3111..4136
                     /gene="rfaD"
                     /locus_tag="VEV83_12780"
     CDS             3111..4136
                     /gene="rfaD"
                     /locus_tag="VEV83_12780"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HYK46043.1"
                     /translation="MNENSTIIITGAAGFIGSCMVQYLNEKGLTNLILVDKFIHSEKD
                     RNWKRKKYQYLVDRELLLEWLDENKPKVDFVIHLGARTDTTEFDYNIHRELNVEYSQD
                     VWNYCTANDIPLIYASSAATYGAGELGYDDDNTLLADLRPLNPYGVSKNEFDLWAVQQ
                     LNAPPFWAGLKFFNVYGPNEYHKKRMASVIFHAFNQIQKEGTVRLFKSYKPEFKDGEQ
                     LRDFIYVKDIVSVIWWIMNEFENKKITEQSPVGNGQLSSGIYNLGTGKARTFNDLVSA
                     TFAALDKEPNIVYIDMPADIKDKYQYFTEAAMLKLKHAGYSEPFTPLEEGVTDYVRNY
                     LTNGKYY"
     gene            complement(4202..5359)
                     /locus_tag="VEV83_12785"
     CDS             complement(4202..5359)
                     /locus_tag="VEV83_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HYK46044.1"
                     /translation="MPYYYKLGTTPHKRHTQFRRPDGSLYSEQLFSTEGFSDDYALLY
                     HCHPPTRIVQTDAATDVSPKIAEEKMLKHRSFEGFKLVPGGDYLQSRKAVLVNNDCLI
                     VLAGPQAGTENYFYKNADADEVIFVHEGSGTLHTQYGDLPFGYGDYLVLPRGTIHQIE
                     FNDEKNRLFIVESHHPIRFPKKYLSKYGQLMEHSPYCERDIRPPQDLKTFDEKGDFLI
                     KTKKRGMLYGIHYGHHPFDVVGWDGCCYPYAFSIHDFEPITGRVHQPPPVHQTFETNA
                     FVICSFVPRLFDYHPQSIPAPYNHSNIDSDEVIYYVDGDFMSRKNVTRGMITLHPAGI
                     PHGPHPGAVEKSIGAKETKELAVMVDTFRPLMLTQEALDIENQDYVMSWAE"
     gene            5728..6366
                     /locus_tag="VEV83_12790"
     CDS             5728..6366
                     /locus_tag="VEV83_12790"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HYK46045.1"
                     /translation="MSTKDYYKILKIRPNASAGEIKHAYRRLALKYHPDRNPHDALAA
                     AVFSEVAEAYKILSNSETRRNYNYQRYYTAVQEYSRPVQPIETLLLRSLELKKQIAGL
                     DPYRFNSDALLYSIKQLLPEPVDVLLKTDPALSKQFLETIVVCSERLPSTQTNDIRQL
                     LEPLFVQYDWLQTRMETLTTRQKKKERWEKYKVILVIFIALALCALIFLSSR"
     gene            6389..7090
                     /locus_tag="VEV83_12795"
     CDS             6389..7090
                     /locus_tag="VEV83_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spheroidene monooxygenase"
                     /protein_id="HYK46046.1"
                     /translation="MLWTLIIIRYPKYLGIFGFLSMAVFRLPLWFDKKITFWKLMGSS
                     ATGSFDMRPDLRQWALLFTSNESTMPKFIRGYLRFFHCDLKQFVMEPTTGHGLWDGKQ
                     LFTSGAKIIPRTAPVAVLTRATIRVNRLKNFWRHAPLVGKKLNNAKGLLASYGLGEVP
                     FIKQTTFSIWEDESSMVAFAYKADEHAQVIRKTRDENWYKQELFMRFRIISVSGFDER
                     IAAKMLNLPASHEEA"
     gene            7215..8738
                     /locus_tag="VEV83_12800"
     CDS             7215..8738
                     /locus_tag="VEV83_12800"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HYK46047.1"
                     /translation="MHSDSKPYYVESELGTLRKILIHSPDGGIGKIIPGTFSDNLYDD
                     IVHLKSMQKEYNHYVQLLLYFLDPEKIDYLKQCRNLPDEKSRAHCFIPGKKEYFDSGN
                     VLEVQQVLGEILKDEKVKLSLISAVCSYEESSFVIQQQLENVSDTALLAKILISGVLP
                     ASANDTKEDQYIFPPVPNFIFTRDIGIMIKDHVLLSRMATTSRKRESLITKFLALYFL
                     FKEDTSKVMEVIEDSDFFLYEERERKARFISIEGGDIMMIHPKHLIVGCSERTSSNAI
                     NEIIHTIFSKQALGIERISVVKIAKNRAQMHIDTIFTQVKRDVWVLYGRYSESIIATE
                     NKVKQSYLRSLMHQPDLIAIEEPEILQFYKAESEAYRCDKDYSVQQKPAGIEELIKQI
                     SVVDYGIQPEDVKIIYSGGNEFPYDDREQWTDSCNVVALKEGVVIGYDRNDHTANAFR
                     KAGFDVITTTELFKKFDEGLDPHSLENTLILLPSAELSRARGGPHCMSMPLLRDQLV"
     gene            8749..9663
                     /locus_tag="VEV83_12805"
     CDS             8749..9663
                     /locus_tag="VEV83_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HYK46048.1"
                     /translation="MQNTSNVLMIRPVHFTYNAETAANNLFQVAGSAEGAQDKALKEF
                     DEFIEKLRQNNINVSVINDTPEPHTPDSIFPNNWISFHENGTVVLYPMYAESRRAERK
                     QHVKDIINQNFSINNIIDLTRFENDDLFLEGTGSMVLDRDERIAYACISPRTNVEVLT
                     DFCNKMNYTPCVFEAHDATGHQVYHTNVMMCVADKYVVICLDSITKTEERQNVEDSIT
                     ASGKGIVPISLDQMNKFAGNMLQLENKGGQKILVMSTQAYESLSEEQKQKLSAYNQVL
                     HSDLRTIETNGGGSARCMIAEVFLPAKR"
BASE COUNT         2933 a         2159 c         2336 g         2435 t
ORIGIN      
        1 cgcaggagca gcaaacaaac ttcaatcccc caccgaccgt tccggcgcag gcagagaccc
       61 agcctgaggt tgcggaaaat gacgaagcag atgcgactcc gatcgttaca tcaccaaaac
      121 ctcaggtgaa aaaacaggta gccgtcgaaa acaacgataa taaaaaagta agcacacaaa
      181 cagtagtaaa tcccacgccg acgccgccaa aaccgaaagc agtttatgcg gggggcacca
      241 gtgcaggcag tggagggaac aacgcagaca cttataacaa ttcgcgcaac cagggcatcg
      301 ccggagggaa cggcgaccag ggaaagccga atggaaatcc aaatagtgat agttatacag
      361 gcaacggcgg aacagggacc gcaggaatca gcatcacaaa tggattgcag ggccggcgta
      421 tttcgagctc tgcgcatttc caggatgcat acaagtacgg cggaaaagtt tccgttgatg
      481 ttacagttga tgagaacgga agtgtgacca gcgcccgcgt caagccggga agtcccttcg
      541 ctgatctaaa tgcgatcgcc gttaaacgcg cttaccaatt aaaattcaac aagggcgata
      601 cacctcaaag cggaacgatc cagatcatct ttcaaaatcc taaaggctag cgtagtttat
      661 tcactgctat tagcaacttc tctttcttgc ttcgcattct ctctctactt ttgcgtctcc
      721 aaaatcacat agatggaagt aaccgcaaag atcgcagaag aattaaggtt aactgaagag
      781 gaatttgaac tgataaaaga aaaactcggc cgcacaccaa acttcacgga gctctgcgca
      841 ttcagcgcca tgtggagcga acattgcagc tataaaaatt ctattaagtg gttaaaaaca
      901 ttaccgcgca ccggcggcag gatgctcgtg gctgcaggtg aagaaaatgc cggcctcatg
      961 gaccttggaa acggctgggg cgtcgtattc aaaatagaaa gccataacca tccgtcggct
     1021 attgaacctt tccagggagc agcaactggt gttggtggaa tccaaagaga catcttcact
     1081 atgggcgcaa ggccgatcgc ttctctcaac agcttacgat ttggaaatct ttccgatctc
     1141 aaaacgcgaa ggttacttgc gggtgttgtg cacggcatcg gccattacgg gaattgtttt
     1201 ggcgttccta ccgtcgctgg cgagacttac ttcgaagatt gttactctac aaacccattg
     1261 gtcaatgcca tgagcgtcgg tatcgtaacg gtcgacaaga ctgttagcgc aactgcaaaa
     1321 ggtttgggca acccagtctt ttttgtaggc agcgcaacgg ggaaagatgg gattggcggc
     1381 gcgtcattcg cgtcagccaa catcacggaa gaaagcgctg aagatctccc ggctgtgcag
     1441 gtgggcgacc cgttccagga aaaaaaatta ctcgaagcat gccttgaagt aattgacacg
     1501 ggcaccgttg tcggtatgca ggatatggga gccgcaggaa tcatctgttc aacggcggag
     1561 atgagcgcaa aaggcggcgt aggtatgcgc gttgatttgg acaaagtgcc gacgcgccaa
     1621 caaaatatgc atgcctggga attgctgctc agtgaaagcc aggaacgtat gttgctagtc
     1681 gctgaaaaag gcagagaggc tgaagtgatc aaggtttttg aaaagtggga tctcccgtgc
     1741 acgcaaattg gagaagtaac aactgacggg ctgctgaaat tttatttgca tggaaaattg
     1801 gaggctgaaa ttccggcgaa agaacttgta ctgggaggcg gcgcgcctca atatacaaga
     1861 gaatataaag agccaaaata tttagagcag gtgaaggctt ttaagatgga tgatattgaa
     1921 gacatcgata agaaagacgt gaaaaccctt gctgagaaga tcatccagtt gccgaacata
     1981 gcatcgaaaa ggtggatcta tattcaatac gatagtacag tgggaacagc caatgcaagc
     2041 acaaatgctc cgggtgatgc ggctatcgtg ctcgcaaagg gaacgggaaa agcacttgcg
     2101 gtaacaacgg attgcaatgg gcattatgtt tttgcggacc cctacaaagg cgccatgatt
     2161 gccgtggcgg aagccgcaag gaacatcgtg tgcagcggcg gcgaaccgat cggagtaacc
     2221 aactgcctca attttggaaa tccttacgat ccggaagtgt actaccagtt tgtaaaagcc
     2281 gtcgaaggaa tgggtgaggc atgccggaaa tttcacacgc cggtcaccgg tggaaacgtg
     2341 agtttctaca accaaaaccc ggatggacct gtttatccga ctcctacgat cggtatggtg
     2401 ggcttgcttg atgacatcaa caaccgcatg acactcgatt tcaaaagggc aggcgatact
     2461 attgtactta tcggccagca aaaaaatgat attgggtgca gtgaatacct gcatgcgatc
     2521 aaaggtgttg aattctcgcc ggccccggct tttgagcttg atgaagaata tgcggtgcaa
     2581 aaatttgtcg cttcgatcat cagggaaaaa ttagtcagca gcgcccatga cctcagtgag
     2641 ggcggattga tagtagcgct gttcgaaagt gcatttaacc gtgagctggg cttcgccatt
     2701 gatgttgaag agacgacacg gcgggatgcg ttttggcttg gcgaggcgca aagccgtgtg
     2761 ttgataagcg ttgcagccga taagcttgct gcactaaaaa gcaaggctgc atcttccggt
     2821 atcgatacca ccgtgcttgg taaagtaacg aacggcgacc ttacagttaa cggtgacaac
     2881 tggggtcaag ttactgattg gaagaacctg tatgataacg ctattggaaa tatggtcacg
     2941 aatgaaaacc tttcttaggt tgtacgatca agcagagcta aaaaaccggt ttcccaaaaa
     3001 attttcagta atatctttac gctttaaatg aattattaag aaagcaaaac agtcttcgca
     3061 ttttatttgc agaggaattt aacgtcagca atagtcacaa aaggaaattc atgaacgaaa
     3121 actctacgat aattatcacg ggcgctgccg gttttattgg aagttgcatg gtacaatacc
     3181 tgaacgaaaa gggattaaca aaccttatcc tcgttgataa gtttatccat tctgaaaaag
     3241 acaggaactg gaaacgaaaa aaataccaat acttagttga ccgggaatta ttgttggaat
     3301 ggctcgatga gaacaagccg aaagttgatt tcgtaattca cctgggcgct cgcaccgata
     3361 ccacagagtt cgattacaac atacatcgtg aattgaatgt ggaatattca caggacgttt
     3421 ggaattattg tacagctaat gatataccgt taatttacgc gtcttccgct gctacttatg
     3481 gcgccggtga actgggatat gatgatgaca acacgttgct tgcggacctg aggcctttga
     3541 atccgtacgg cgtcagtaag aatgaatttg acctgtgggc agtgcaacaa ctaaatgctc
     3601 cgccattttg ggcaggcctc aaatttttca atgtctacgg acctaacgaa taccacaaga
     3661 agcgaatggc cagcgtcata tttcatgcgt tcaaccagat acaaaaagag ggcaccgtaa
     3721 ggctttttaa aagttataaa ccggaattca aagacggcga acaattacgc gacttcatct
     3781 atgtgaaaga tattgtcagt gtgatctggt ggatcatgaa tgaattcgaa aacaaaaaga
     3841 ttactgaaca atctccggtg ggtaatgggc aactttcttc agggatctat aatctcggca
     3901 caggaaaagc cagaactttt aatgatcttg tctcggccac ctttgcagca ctggataaag
     3961 aaccgaacat tgtttatatc gatatgcctg cagatataaa agacaagtat caatatttta
     4021 cagaagcggc aatgcttaaa ctaaaacatg caggatacag cgaaccgttc acgccacttg
     4081 aagaaggggt gaccgattac gtgagaaatt accttacaaa tggaaaatat tattagttgc
     4141 aggtctgccg gcaactggta accggtaacc tgcaacttgt aacctgaaac ctgccgcccc
     4201 ctcactccgc ccaactcatc acgtaatcct ggttttcgat atcgagggct tcctgcgtaa
     4261 gcattaacgg cctgaaagtg tcaaccatca cggccaactc ctttgtttct tttgcgccga
     4321 tgcttttttc gacagcaccc gggtgcggtc cgtgcggaat gcctgcagga tgcagcgtta
     4381 tcatgccgcg tgttacattt ttccggctca tgaagtcgcc atctacataa tagatcactt
     4441 catcgctgtc gatgttgctg tggttgtatg gagcaggtat gctttgcgga tgataatcga
     4501 acagacgcgg cacaaagctg caaatcacga aagcatttgt ttcaaaggtc tgatgcaccg
     4561 gtggcggttg atggacacgc ccggttatgg gttcaaaatc atgaattgaa aaggcataag
     4621 gataacaaca accgtcccat cccaccacat caaagggatg atgaccataa tggataccgt
     4681 aaagcattcc gcgctttttc gttttgataa gaaaatcgcc tttctcatca aaagttttca
     4741 gatcctgcgg tggccgtatg tctcgctcgc agtagggtga atgctccatc agttgtccgt
     4801 atttgctcaa atattttttt ggaaaccgaa ttggatggtg cgattccacg atgaacaatc
     4861 tattcttctc atcattgaat tcaatttggt ggatcgtacc gcgcggtaag acgaggtaat
     4921 cgccataacc gaaaggcagg tctccatatt gggtatgcag ggtgccgctt ccttcatgaa
     4981 caaagatcac ttcatcggca tcggcgtttt tataaaaata attttcagtt cctgcttgcg
     5041 gacctgccag cacgatcaga caatcgttgt ttaccaaaac agctttccgg ctttgaaggt
     5101 aatcgccgcc tggtactaat ttgaatcctt caaagctgcg atgtttcagc attttttctt
     5161 ctgcgatctt cggcgaaaca tctgttgctg catcggtttg aacgatcctg gtgggtgggt
     5221 gacaatgata cagcaatgca taatcgtcgc taaaaccttc ggtgctgaac aactgttcag
     5281 agtacagcga accatccggc cgccgaaact gtgtgtgacg tttgtgtggg gtcgttccca
     5341 atttataata gtatggcatc aatcctcctt aatttcttaa tgcccgccga tagcaggcaa
     5401 aaaacaaatt ttaatttgat tggataaatg atcaaaatgc atccaggctg cactcgttgt
     5461 ctcaccgccg caccggaaaa tttatacaaa gcaggcggtg aaattcaaaa ttaaggaaat
     5521 ggctggagcg gctgatgctc ctttaacatt tccggtttaa acctgcgaga accggaaaca
     5581 tcttaaagat atcttctgaa aacgaggaaa tttttagtat gtgtttttga tgtaatgagg
     5641 attggtttta aggtttaccc cgtcaagtct ttggcggggt tttttttgcg tcgataaaat
     5701 atgattcaaa ctacattcgc tttctgaatg tcgacaaaag attattacaa gattttgaaa
     5761 atcaggccta acgcgtccgc aggcgaaata aagcatgctt accgccggct cgcgttgaaa
     5821 tatcatcctg accgtaatcc gcacgacgcg cttgccgccg ctgttttttc cgaggtagcg
     5881 gaagcatata agatattgtc gaacagcgaa acccgcagaa attacaatta tcaacgatat
     5941 tatactgctg tgcaggaata ttcaagacct gtgcagccga tcgaaacgct attattgcga
     6001 agcctggaat taaaaaaaca gatcgcaggt cttgaccctt accggttcaa cagcgacgca
     6061 ttgctttatt ctatcaaaca attattgcca gagcctgttg acgtgttatt aaaaacagat
     6121 ccggctttaa gcaaacagtt cttagaaaca attgtggtct gcagcgaacg gcttccatca
     6181 actcaaacca acgatataag acaattactt gagcccttat ttgttcagta cgattggctg
     6241 cagacacgaa tggaaacttt gacaaccagg cagaagaaaa aagagcgttg ggaaaaatac
     6301 aaggtgatac tggtcatatt tattgcactt gcactttgcg cgctaatttt tctttcatcg
     6361 cgatgagaaa cagaacggag atatccaaat gttgtggaca cttattatca tacgctatcc
     6421 taaatacctc ggcatttttg gtttcctgtc gatggccgtg tttcgcctgc cattgtggtt
     6481 tgacaagaag atcacgttct ggaagctcat gggcagcagt gccaccggaa gttttgatat
     6541 gcgtcccgat cttcggcaat gggcgttgct gtttacgagt aatgaatcga caatgccgaa
     6601 gttcattcgc ggatacttgc gcttttttca ctgcgatctc aagcaatttg tcatggaacc
     6661 gacgacaggc catggtttat gggatggaaa acaattattt acctccggag cgaaaattat
     6721 accgcgcact gcgccagtgg cggtgttaac acgtgcgacg atccgggtta accggttaaa
     6781 aaatttttgg aggcacgctc cgctcgttgg aaagaaattg aataatgcaa agggactcct
     6841 ggcctcttat ggactaggcg aagtaccgtt cattaagcaa accactttca gtatttggga
     6901 agacgaatcg tctatggtag cgtttgcata taaagcagat gaacatgcac aagtgatccg
     6961 aaagacacgt gatgaaaatt ggtacaaaca agagttgttt atgcgcttcc gaataatatc
     7021 cgtgtccggg tttgatgaac gaattgcagc aaaaatgctt aacttgcccg cttcgcatga
     7081 agaagcataa ttcaaacgat caactgcttg ctatctttct gaatctcatc tctgcaacgg
     7141 aaggcggatc acctgactac taagttcgcc gcatttttcc ggttgcgttc cccatttttg
     7201 attaaaacat ttttatgcat tctgacagca aaccatatta cgttgaatct gagctcggca
     7261 ctttaagaaa aatacttatt catagcccgg acggtggcat cggcaaaata attccgggca
     7321 ctttttctga caacttgtac gatgatatcg tacatctgaa aagcatgcaa aaagaatata
     7381 atcactatgt tcagttgctt ctatattttc tcgacccgga aaaaatcgat tacctgaaac
     7441 agtgccgcaa cctgcccgat gaaaaatcga gagcacattg ttttattccc ggcaaaaaag
     7501 aatacttcga ctcagggaat gtactcgagg tgcagcaagt gctcggcgag atcctgaagg
     7561 atgaaaaagt aaaactcagt cttatatcgg cagtttgttc ttatgaagag tccagctttg
     7621 taattcaaca gcagctcgaa aatgtaagcg ataccgcgtt gctcgcaaag atccttatca
     7681 gcggagtatt gcctgcatcc gcgaatgaca caaaagaaga tcagtacatt tttccgcctg
     7741 ttccaaactt tattttcacg cgggacattg gcatcatgat caaggaccat gtgctgttaa
     7801 gccgcatggc gaccacctcg agaaaaagag aatcgctcat tacgaaattt cttgcgctgt
     7861 attttttgtt caaagaagac acttcgaagg tgatggaagt tattgaggac agtgattttt
     7921 tcctgtatga agaacgtgag cggaaagcaa ggttcatcag catcgaaggc ggcgatatca
     7981 tgatgataca tccaaaacac ctcatcgttg gatgcagcga aagaacgtca tcgaacgcca
     8041 tcaacgagat catacatacc atcttttcca aacaggcttt aggtatcgag aggatctcag
     8101 tggtgaagat cgccaagaac cgtgcgcaaa tgcatatcga caccatattc acgcaggtaa
     8161 aacgcgatgt gtgggttttg tatggccgat attctgaaag catcattgcg actgaaaaca
     8221 aggtgaagca gtcgtacctg cgaagcctta tgcaccaacc tgacctgatc gcgatcgaag
     8281 aacccgagat ccttcaattt tataaagcgg aaagcgaagc ttaccggtgc gataaagatt
     8341 acagtgtgca acaaaaaccc gcgggtattg aagaactcat aaaacaaata agtgttgttg
     8401 attacggcat acagcctgag gatgtgaaaa taatttatag cggtggtaat gaatttcctt
     8461 acgacgaccg cgagcaatgg actgatagct gtaacgttgt cgcgctcaaa gagggggtag
     8521 tgatcggcta cgatcgcaat gatcatactg caaacgcttt tcgaaaggca ggatttgatg
     8581 taataacaac aacagagcta tttaaaaaat tcgacgaggg ccttgatccg cacagcctgg
     8641 agaacacatt aatactattg ccgtccgcag aactttcgcg cgcgcgtgga ggccctcatt
     8701 gtatgagcat gccgctgcta cgcgaccaac ttgtttaaaa attattgcat gcaaaacacg
     8761 agcaatgtcc tgatgatacg cccggtgcat ttcacttata atgcagaaac cgcggcgaat
     8821 aatctgttcc aggtggcggg cagcgcagaa ggggcgcagg ataaggcact gaaggaattc
     8881 gatgagttta ttgaaaagct gcgccagaac aacattaatg tttcggtgat aaatgatacg
     8941 cctgaaccgc acacgcccga ctctattttt ccgaataact ggatatcgtt tcatgaaaac
     9001 ggcaccgtcg ttttataccc aatgtatgcg gaaagcaggc gtgcggaaag aaagcagcat
     9061 gtaaaggaca tcataaatca aaacttctcg atcaacaaca tcatcgatct cacgaggttc
     9121 gaaaatgatg atctttttct tgagggaaca ggaagcatgg ttttagatcg cgacgaaagg
     9181 attgcatacg catgcatttc gccaagaaca aatgttgaag tgctcactga tttctgcaat
     9241 aagatgaatt acacgccgtg cgtatttgag gcgcatgatg caacaggcca ccaggtctat
     9301 cacacaaatg tgatgatgtg cgttgccgat aaatacgtcg tgatctgcct ggattcgatc
     9361 acgaaaacag aagagcgcca aaacgtggaa gacagcatca cagcaagcgg caaaggaatc
     9421 gtaccgatct cactcgacca gatgaacaaa ttcgcgggga acatgctgca acttgaaaat
     9481 aaaggcggac aaaaaatatt ggtcatgtca acacaggcat acgaatcact cagcgaggaa
     9541 cagaaacaaa agctgagcgc ttacaaccag gtactgcact ccgacctaag aacgatcgaa
     9601 accaacggag gtggcagcgc ccggtgtatg atagcagagg tttttctacc tgcaaagcgc
     9661 tagtatgttt acctgacgct tctgtccaaa aatgcctcat cctgtctcat gcggatattt
     9721 ttaaaaccga atgtttactt tttaccttct gaacaagcgc atatttgcaa tgaaattgac
     9781 cggaagtatt taaaatatcc tgaaaaaccg aaccggaaca attgcccccg ttttaaaaaa
     9841 tctaatggta ttgtttcaaa aaa
//
LOCUS       DASQJI010000462         3074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2513034,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000462 DASQJI010000000
VERSION     DASQJI010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2513034"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3074)
                     /locus_tag="VEV83_12810"
     CDS             complement(<1..>3074)
                     /locus_tag="VEV83_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46049.1"
                     /translation="NREIATFAPGNSWVGDAVGVSTGYMTNTGTGAGADNVKIWDIGL
                     ANGSLPINPAAPNDVYAGGTLLKGITMDEEGHQVIEFKDKNNHAILKKVQQSSSPSGD
                     YGGWLCTFYVYDDIGNLRFVIPPRAVEYLIGHGWAFDGSTWMTSSVAKRLCFSYEYDD
                     ENRMIVKRVPDAGEVWMVYDIRDRIAMTQDENLRPLNKWLCTVYDDLNRTVKTGFFND
                     PTHGQDRTWQQGQAGAQQHYPGTSSNFEVLTETYYDDYLWITSDINLKPTLITTNINN
                     TQYFYTPDDLNFPYPQAVKANYQDKNLVTGTKIQVIGTTNYLYTVNFYDDHGRLIQTQ
                     CYNYSNPGYPTRDTITTQYSFSGQVLRVLVAHKKAGTNPQNYRVCTKSEYDYSGRLQK
                     VSKLIGNHLTSSPEVILSQNRYDELGQLTEKDLGQQRVNLVQNAYISTAVDILQYEYN
                     IRGWLRGINKDYARGVSGATGWFGMELCYDFGFTQKLFNGNIVGERWRSRGDGEQRAF
                     GFTYDNSNRLTSAPFNQLNASIWENTKMDFSVSNLAYDANGNIQSLKQMGMQVNNIAT
                     IDDLSYNYNVNSNQLKYVSDQGTWNSSLGDFKEATHNVQNPTQDYWYDNNGNLTMDDN
                     KKISNISYNYLNLPSLITLKKPDGTDKGTISFIYDASGNRLQKIVVDKTISPNKTITT
                     DYIGLFTYEADVLQYISTEEGRARPAVAGQVGVMYYDYFEKDHLGNVRVVLTDQKAQN
                     IYPAATLEGSLTQDGQPNAIFNEKNYYSINSSNVVNNPTGMPTYTNNSNGIANNNPNS
                     VGTDNSQKVYKLTGTSTAPATGLSITLKVMSGDVIDIFGKSYWTQYNTTQGNQNLPLD
                     QILAAMILTPDALATSHGASVAGLTTGSNATMIPSSFLTRSIQNGDTKPMAYINYLLF
                     DEQFQYVTGSFSRVGSYGTLKDHHTELQNITVTKNGYLYVYCSNQSPVNVFFDNLQIV
                     QTRSPLIEETHYYPFGLTMAGISSEALNFGEPKNKEKTFQEQRFDDDFGLNW"
BASE COUNT          761 a          683 c          635 g          995 t
ORIGIN      
        1 tccaattcaa tccgaaatca tcgtcaaatc gttgctcttg aaaagttttt tctttgtttt
       61 taggttctcc aaagttcagc gcctcggatg atatcccagc cattgtcaag ccgaacggat
      121 aataatgtgt ttcttcaatt aatgggctcc ttgtttgcac tatttgcagg ttatcaaaaa
      181 acacatttac cgggctttgg ttgctgcaat aaacataaag gtatccgttt tttgttacgg
      241 taatattttg cagttcggta tgatgatctt tcaaggtccc gtaactacca accctactaa
      301 aacttcctgt tacatattga aattgttcgt caaacaatag atagttgatg tatgccatag
      361 gctttgtgtc gccgttttga atgcttcgcg ttaagaaact cgaggggatc atcgtcgcgt
      421 tagaccctgt tgtaagccct gcgaccgatg caccatggga agtcgcaagt gcatcagggg
      481 taagaatcat tgccgctaaa atctgatcta gaggtaaatt ctgattgcct tgggtagtat
      541 tatattgagt ccaataactt tttccgaaaa tatcaatcac gtcgccgctc atgactttta
      601 gcgttatgct gaggccagtt gccggcgccg tagaagtgcc agtcaatttg tatacttttt
      661 gactgttatc tgtaccgaca ctattcggat tgttgttcgc aatgccgttg ctgttattcg
      721 tataagttgg cattccggta gggttattga caacgttcga tgaatttata gagtagtaat
      781 tcttttcatt gaaaattgcg ttcggctgac cgtcctgggt tagacttcct tcaagagtgg
      841 ccgcgggata aatattttgt gctttctggt ccgtcaggac tacgcgtaca tttcccaaat
      901 gatctttctc aaagtagtca tagtacatga caccgacttg ccccgcaact gctggtcttg
      961 ccctgccctc ttcagtactt atatattgca agacatccgc ttcataagtg aacaagccga
     1021 tgtagtccgt ggtgatggtt ttgtttggag agatggtttt gtcgacaact atcttttgca
     1081 gtctgtttcc ggacgcgtcg tagatgaagc taatggtgcc tttgtcagtg ccgtcaggtt
     1141 ttttgagcgt tataagggaa ggcaaattca aataattata acttatatta ctgatttttt
     1201 tgttgtcatc cattgtcagg ttgccgttgt tatcatacca atagtcttgt gttggattct
     1261 gaacattgtg agttgcttct ttgaagtcac ccaaagaact attccatgtg ccctgatctg
     1321 agacatattt tagctgattt gagttcacgt tataattgta ggaaaggtca tcgatagttg
     1381 caatattatt tacctgcatg cccatttgct ttaacgattg gatgttcccg ttcgcatcat
     1441 acgccaggtt actaacacta aaatccattt ttgtattttc ccaaatgcta gcatttaatt
     1501 ggttgaaagg agcgctcgtc aatcgatttg aattatcata tgtaaagccg aatgctctct
     1561 gctccccatc gcccctactt ctccatcttt ctccaacgat attaccatta aacagtttct
     1621 gggtaaagcc aaaatcataa cagagttcca taccaaacca cccggttgcg ccgctgacgc
     1681 cacgcgcata gtctttgttt atacctcgca accatccgcg aatattgtac tcatactgta
     1741 aaatatcgac cgccgtcgag atatatgcat tttgaacgag gttaacgcgc tgttgaccca
     1801 aatctttttc ggtcagctgc cctagttcgt cgtatcggtt ttgagaaagt attacttccg
     1861 ggctactcgt taaatggttt ccaattagct tactcacttt ttgcaatctg ccactgtagt
     1921 catattcact tttggtgcat acccgataat tttgcgggtt agtacctgct ttcttatgtg
     1981 caaccaaaac ccgcagaacc tgtccgctga aactgtactg cgttgtaatt gtgtctcgcg
     2041 ttgggtagcc gggattgctg taattatagc attgcgtctg aatcagtctt ccatggtcat
     2101 cataaaaatt tacagtgtat aaataatttg tggttccaat cacttgaatt ttggtgccgg
     2161 ttaccaaatt tttatcctgg taattagcct tcactgcctg cggatacgga aagttaaggt
     2221 catcaggagt ataaaagtat tgagtgttat ttatgttcgt ggtgatcagc gttggcttca
     2281 ggttaatatc gctggtgatc cacaaatagt catcataata agtctcggta agtacttcaa
     2341 aattcgatga agtgccggga taatgctgtt gtgcaccagc ttgcccttgt tgccaggtgc
     2401 ggtcttgtcc atgagtggga tcattaaaga atccggtttt tacggtgcgg ttcaagtcat
     2461 cataaacagt gcatagccat ttattcaacg ggcgtagatt ttcatcctgc gtcattgcta
     2521 tgcgatcgcg gatgtcataa accatccata cttcgccagc atcgggtacc cgtttaacaa
     2581 tcattctatt ctcgtcatcg tattcataac taaaacagag ccgcttcgcg acactacttg
     2641 tcatccaggt gctaccatcg aaagcccagc catgaccgat tagatactcg acagcgcgcg
     2701 gcggtattac aaatctcaag ttgccgatat catcatacac gtaaaaagta caaagccatc
     2761 cgccgtagtc gccagatgga ctgctgcttt gttgaacttt tttgagaata gcatggttat
     2821 tcttatcctt aaattcaatt acctgatgac cctcctcgtc cattgtgatt ccttttaata
     2881 aggttccacc ggcgtataca tcgttcggcg cagcaggatt gatgggaaga gaaccgtttg
     2941 ctaaaccgat gtcccaaatt ttcacattgt ctgctcccgc gcctgttcca gtattggtca
     3001 tataaccagt acttactcct actgcatcgc caacccagct atttcctggt gcaaaggtgg
     3061 caatctccct gttc
//
LOCUS       DASQJI010000463         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2052882,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000463 DASQJI010000000
VERSION     DASQJI010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052882"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..1212)
                     /locus_tag="VEV83_12815"
     CDS             complement(238..1212)
                     /locus_tag="VEV83_12815"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HYK46050.1"
                     /translation="MHKTCWRGCLKKLISQTVDRRSEKNGKVKVKVQAQLFGITRQAL
                     HKRKKKVQKKNSDKEQICCMAKTVRKYLPRTGTRKIHDITRHYLNERGIFVGRDRFFK
                     ILREEQLLVRRRKRHFFTTDSKHLFRKYPNKAKDLVVTQPEQLWVSDITYLKTRAGNL
                     YLSLITDAFSRKIMGYHVADHLKATGPIEALKMALKNRMYPKRKLMHHSDKGIQYCCD
                     AYVKVLNENKIKISMTSQYDPYENAKAERVNGTIKNEFQLDEVMPDIAFVKREINKTV
                     EVYNSLRPHLSCHMKTPEQMHVNPNPYPIKLKTNPLWETIFLNNFSSN"
     gene            complement(1122..1496)
                     /locus_tag="VEV83_12820"
     CDS             complement(1122..1496)
                     /locus_tag="VEV83_12820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46051.1"
                     /translation="MTKKTSAAERIRFKECSHAFKLKVVQEIENGLISKNFAAKKYLG
                     TRSTIDYWCKKLGTDMNEKNNHSTRKEIKKLKEKVEELQLIADVRQDIIDEFIKLVGE
                     DASKNLYPKQLIEEVRRMGRSK"
     gene            complement(1723..>2700)
                     /locus_tag="VEV83_12825"
     CDS             complement(1723..>2700)
                     /locus_tag="VEV83_12825"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46052.1"
                     /translation="WQKSLGGSLSDEAFSIDQTTDGGYIVAGISESNDSDVSGNHGLD
                     DYWLVKLKKNGVIQWQKSLGGSTYDDPTSIQQTSDSGYIVAGHTDSNDGDVSGNHGIG
                     DYWIVKLDKYGGILWQKCLGGGGLDGANAIQQTADGGYVVAGYSGSNNNQVSGNNGGF
                     DYWVVKLKKNGFIQWQESLGGSALDVATSVQQTTDSGYIVAGYSTSRDSDVSGNKGSF
                     DFWVVKLAKDGLSPVVSQTTNLYAERQSKNETNTSKDFTVYPNPARDILHIGTSINAV
                     FSFLNSSGEILFTKTINDNAVINISQLPPGNYYVRNNTTGTTEKLIVER"
BASE COUNT          690 a          594 c          509 g          907 t
ORIGIN      
        1 ttttgcgcaa gggcagcaga ggttgctgaa agaaccaaaa tcgctataac gaatgtcgtt
       61 ctcatacaga agtctcctta aaataatccg ttttttaaaa atttactgca caaaaattat
      121 gcttatttga ttatttcaaa aggtctgctt taggtcatcg aagttctgct aagtgcatgc
      181 cgaatgcaac acgaaaattt tgattttcgc agtgtgtcgt cctgaaaaaa gttgacatta
      241 atttgaacta aaattattta aaaagatcgt ttcccacagc ggattggttt ttagttttat
      301 agggtacgga tttggattaa catgcatttg ctcgggcgtc ttcatgtgac aactgagatg
      361 gggccttaaa ctgttgtaga cctcaacggt tttgttgatt tctcttttaa caaaggcaat
      421 atctggcatc acctcatcga gctgaaattc atttttgatg gttccattca ctctttctgc
      481 ttttgcattt tcgtaaggat catactgtga tgtcatgctg attttgattt tgttttcatt
      541 taagactttt acgtaagcat cgcaacaata ctgaatgccc ttgtctgaat gatgcataag
      601 ttttcttttc ggatacatcc tgttcttaag tgccatcttc agggcttcaa taggtcctgt
      661 ggcctttaaa tgatcggcca catgatatcc cattatcttt cttgaaaagg catcggtaat
      721 aagacttaaa tacaaatttc cagcccttgt tttcagatag gtaatatcac ttacccaaag
      781 ttgttcgggc tgggtgacaa ccaggtcttt tgctttgttt ggatacttgc ggaacagatg
      841 ctttgaatcg gtcgtaaaaa agtgccgttt acgccgcctg acaagcaatt gttcctctcg
      901 cagtatctta aaaaacctgt ccctgcctac aaagattcct ctttcgttta gataatgccg
      961 ggtgatgtca tggattttcc tcgtgcctgt cctgggcaga tacttacgaa ctgtctttgc
     1021 catacaacat atttgttctt tatcagaatt tttcttttga actttcttct ttcttttatg
     1081 caatgcttgc cttgtaatcc caaacagctg tgcctgtact tttactttga ccttcccatt
     1141 cttctcactt cttctatcaa ctgtttggga tataagtttt ttgaggcatc ctctccaaca
     1201 agttttatga attcatctat aatgtcctgg cggacgtcgg cgatcaactg cagctcttca
     1261 accttctctt tgagcttttt gatctcctta cgggtcgagt gattgttttt ttcattcata
     1321 tctgtaccta attttttaca ccagtaatca atggtgctgc gagtgccaag atactttttt
     1381 gctgcaaaat ttttcgagat gagtccattt tcaatttcct gtacaacttt caacttgaaa
     1441 gcgtggctgc actctttgaa ccggatccgt tcggcagctg aggtcttctt tgtcatgttt
     1501 gcctgattta gatttacaca tttttgtgtc aacctatttc aggacgatgc aagtctaaaa
     1561 aaagcagcta acgaaaaagt atttgcgatg gcaggatatt cgttgaacgt ccggcccgaa
     1621 caaaggagag cattatgtta caaattatct cgaagcgaag attgacagga tacggagctt
     1681 gctcgaagac cgttagcaat catgctgcag ctgtcgctga ctttatctct ctacgatcaa
     1741 tttctctgtg gtgccagttg tattatttct tacataataa ttgcccggcg gcaattggct
     1801 gatatttata acggcgttgt cattaattgt cttcgtaaat aaaatttctc ccgaagaatt
     1861 tagaaaagag aagaccgcat tgatgcttgt tccaatatgc aatatgtctc gtgcaggatt
     1921 cgggtaaact gtaaaatctt tgctggtatt cgtctcattt ttgctttgcc tttctgcata
     1981 cagatttgtt gtttgagata caactggcga taaaccatcc ttggccaatt ttacgaccca
     2041 gaaatcgaac gaacccttat taccgcttac atcgctatcc ctggaagtag aatatccggc
     2101 tacaatgtat ccgctgtctg tagtttgctg aacggaagtg gctacgtcta gagcactgcc
     2161 accaaggctt tcttgccact gaataaagcc attcttttta agcttaacta cccagtaatc
     2221 aaaaccacca ttattgccgc ttacctggtt gttatttgaa ccggagtatc cagccacaac
     2281 atatccgccg tccgctgttt gctgaatggc atttgcaccg tccaaaccgc caccaccaag
     2341 gcatttttgc cacagaatgc caccatattt atcgagctta acaatccagt aatcaccaat
     2401 cccatgatta ccgcttacat cgccgtcgtt agaatcagta tgtcccgcta cgatgtaccc
     2461 gctgtcggat gtttgctgaa tggatgttgg atcgtcataa gtgctcccac caagactttt
     2521 ttgccattga ataacgccat tttttttaag cttaactagc caataatcgt caagaccgtg
     2581 attaccgctt acatcactgt cgtttgattc agaaatcccg gctacgatat atccaccgtc
     2641 cgttgtttgg tcaatggaaa atgcttcgtc actaagactt ccaccaaggc ttttttgcca
//
LOCUS       DASQJI010000464         3582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1282640,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000464 DASQJI010000000
VERSION     DASQJI010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282640"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VEV83_12830"
     CDS             <1..481
                     /locus_tag="VEV83_12830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46053.1"
                     /translation="ANATLNAPDQNVAKQEVLTRVNNWIGRNDSSTVQAVGFRSEEAK
                     QQYATQFVNQVWSPWMKYFMRINPHPYLVNLKKVKVLALNGSKDLQVVSHQNLPAISD
                     ALKEGHTKVFETKELIGLNHLFQTCTKCTLAEYGQLEETIAPVALQTITDWLNKNAK"
     gene            478..1077
                     /locus_tag="VEV83_12835"
     CDS             478..1077
                     /locus_tag="VEV83_12835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008770 - [acyl-carrier-protein]
                     phosphodiesterase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HYK46054.1"
                     /translation="MNYLAHARLSFGEPDILVGNMISDFVKGKKRFDYSEPVQKGIIL
                     HRAIDTFTDEHEATKEAKKFFKPVVGLYAGAFMDIVYDHFLAIDENEFSNEQALLDFS
                     ILVYRELENQALILPPKFTRLFPYMKSENWLYNYRTVSGIGKSFSGLMHRAKYLEYNS
                     VVLESFQKNYDELKVCYDFFFPAVKTFAYRWLAAINNLH"
     gene            1139..1693
                     /locus_tag="VEV83_12840"
     CDS             1139..1693
                     /locus_tag="VEV83_12840"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK46055.1"
                     /translation="MKKSFLPLLLFLAASAAAQQNPTDLDKSPMDMSYWPANYPILKM
                     SGKATSSPVARIIYSRPQKAGRDIFGGIVGYGQVWRLGANEATEIEFFKSVKLNGKSL
                     SKGRYTLYAICNADKWTIIVNSDKDIWGLAYNEKKDVLRADVPVQKSETSVEALTMYF
                     DSDKNAANLNILWDNAKVVIPFTE"
     gene            1822..>3582
                     /gene="asnB"
                     /locus_tag="VEV83_12845"
     CDS             1822..>3582
                     /gene="asnB"
                     /locus_tag="VEV83_12845"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HYK46056.1"
                     /translation="MCGIAGIISPYSSFVQHDRLKLMADALKHRGPEGEGYWTNAEQT
                     VGFAHRRLRILDLSEQASQPFHYLHYTIIFNGEIYNYIELKDELKQYGYSFGTTCDTE
                     VIPAAYDHWGTDSLNHFDGMFAFAMFDGRKEEVFIARDRFGEKPLYYHAEYVHRGRFE
                     NFIFASEMKALWATGLPKKLNGTMMLNFISLGYVQNADKKTETFFSNILSLSPGHYLT
                     VQPSQGRVQMKKWYRLENSQTKFQISKPSDENQVIERFSELFLSSVNRRLRSDVKIGT
                     SLSGGVDSSAVVAAIKQIKQQHLLPATWSNVAFSAIFPGFEKDESVQSKIVAEHLNIE
                     QHTIEPTAADCINKFDKLMYYQEEPVQSSSVLTQFMVYGLAKEHGITVLLDGQGADEI
                     LAGYKRYAHWYLQQLLRENIKRFRIEKKLLQENHFLELWNLKNYVAAFVPQLTSKKLE
                     DRAYKKQMHTPFLSNDFFLHNFNKDSLHKPVVKSLDDILYYNTFHLGLPELLRYADRN
                     SMAHGREIRLPFLSHELVEFMFSLPAELKIKKGFTKWILRKAIQTWLPAEIAWRKDKT
                     AYEPPQKKWLQDPAIKEMIME"
BASE COUNT         1080 a          739 c          819 g          944 t
ORIGIN      
        1 tgcaaacgcg acgcttaatg cgccggatca gaacgtcgct aaacaggaag tactaacgag
       61 agtcaacaat tggatcggaa gaaacgattc ttctacagtg caggctgtag gttttagatc
      121 tgaagaggca aagcaacagt acgcaaccca gtttgtaaac caggtgtggt ctccgtggat
      181 gaaatatttt atgcgcataa atccgcatcc gtatctcgtt aacctgaaaa aagtgaaagt
      241 gcttgctttg aacggcagta aagatctgca ggttgtttca catcaaaacc ttccagcgat
      301 ttccgatgcg ctgaaagaag ggcacactaa agtttttgag acaaaagaat tgattggact
      361 caaccatctt tttcaaacat gcacaaaatg caccctcgca gaatacggac agctcgaaga
      421 aacgatcgcc ccggtggcct tgcaaactat cacagactgg cttaataaaa atgcgaaatg
      481 aattacctgg cgcatgcccg gctttcattc ggtgagccag acattctggt cggaaatatg
      541 atcagtgatt ttgtaaaggg caaaaaacga tttgactatt ccgagcctgt tcaaaaaggt
      601 ataatactcc atcgtgctat tgatacattt acagacgaac acgaagcgac gaaagaagct
      661 aaaaagtttt ttaagcccgt tgtcggctta tatgcgggcg cttttatgga tattgtgtac
      721 gaccacttcc tggcaattga tgagaacgaa ttcagcaatg aacaagcgct tcttgatttt
      781 tccattttgg tgtatcgcga gcttgaaaac caggcactaa tacttccgcc aaaatttacc
      841 cggctgttcc catatatgaa gtcagaaaac tggttatata attacaggac cgtttcgggg
      901 atcgggaaaa gtttcagcgg tttgatgcac agggcaaaat atttggaata taattccgtt
      961 gtacttgaga gttttcaaaa aaattacgat gaactgaaag tgtgctacga ctttttcttt
     1021 cctgctgtga aaacatttgc ctatcgctgg ttggccgcga taaataattt gcattaatct
     1081 tgctcacttt ttttaatgta tgtgaatgtt ccctgtgatc aaaatttgca caagaactat
     1141 gaaaaaatcc tttttgccgc ttctgttatt ccttgcagct tcggctgccg cccagcaaaa
     1201 cccgaccgat cttgataaaa gtccaatgga catgtcatac tggcctgcga attatcctat
     1261 acttaagatg tcaggaaaag ctaccagttc acctgttgcg aggattattt acagcaggcc
     1321 gcaaaaagcg ggcagagata ttttcggcgg cattgttgga tacgggcagg tttggcgtct
     1381 cggtgcgaat gaagcaaccg agatcgagtt ttttaagtcg gttaaactaa atggcaaatc
     1441 cctttcgaaa ggccggtata cattgtacgc aatctgtaat gctgataagt ggacgatcat
     1501 cgtaaacagc gacaaagaca tatggggcct cgcatacaat gaaaagaaag atgtattgcg
     1561 cgccgatgtt ccggtgcaaa aaagcgaaac ttctgtggaa gcactcacga tgtatttcga
     1621 cagcgataaa aacgctgcca acctgaatat tctttgggat aacgcgaagg tggtgatccc
     1681 atttacggag taatttcttt tggtgtacat ctggatagcc gggcatcggt cagaaaaacg
     1741 gtcatgtcaa ttctaaatcc attactcgct cggacctgtg cgaaactttc atgctttgag
     1801 tgaaagctcg atatttacat catgtgcggc attgccggaa ttatttcacc ttacagttca
     1861 tttgttcaac acgatcgctt aaagcttatg gccgatgcat taaagcatcg cgggcctgaa
     1921 ggggaaggtt attggacaaa cgcagaacaa acagttggct tcgcccaccg gcgcctgcgg
     1981 atactcgatt tgtcggagca agcatcacag ccatttcatt atttgcatta cacgataatc
     2041 tttaacggag agatctataa ctacatcgag ctaaaggatg agttgaaaca atacggctac
     2101 agcttcggga cgacgtgcga cactgaagtg atccctgctg cttatgatca ttggggaaca
     2161 gattccctga atcactttga tgggatgttt gcgtttgcga tgtttgatgg acgcaaggaa
     2221 gaagtattta tagccaggga ccggtttggt gaaaagccat tgtattatca tgctgagtat
     2281 gttcatcgcg gcagatttga gaatttcata tttgcaagtg aaatgaaagc gctctgggct
     2341 accggccttc cgaagaaact gaacggcact atgatgctga attttatttc gctgggttat
     2401 gttcaaaacg ctgataaaaa aaccgaaact ttctttagta atattttatc gctgtcgccg
     2461 ggacactatt taacagttca gccatcacag ggacgtgtgc agatgaagaa atggtaccgg
     2521 ttggaaaatt cacaaaccaa attccaaatc tcaaagccca gcgatgaaaa ccaggtaatc
     2581 gaacgatttt ctgagctgtt ccttagttca gtgaatcgaa gattgcggag cgatgtgaag
     2641 atcggaacca gtttgagtgg aggcgtagac agttctgccg tggtggctgc gatcaaacag
     2701 ataaaacaac aacatctgct gccggccacc tggagcaatg ttgcattttc cgcgatattt
     2761 ccggggtttg aaaaagatga atctgtccaa agcaaaatag ttgctgaaca tttgaatatt
     2821 gaacaacata cgattgaacc gactgctgcc gattgcataa acaagtttga taagttgatg
     2881 tactaccaag aagagccggt gcaaagcagc agcgtgttaa cgcaattcat ggtgtatggt
     2941 ttggcaaaag agcacggcat cacggtgctt ctggacgggc agggcgccga tgagatcctt
     3001 gctggctata aaagatacgc ccattggtat ttgcaacagt tgctacgcga gaacatcaaa
     3061 cgtttcagaa tcgaaaaaaa attgctgcaa gagaatcatt tcctggaact atggaacttg
     3121 aaaaattatg ttgcggcttt tgttccgcag ctaacgtcta aaaaattgga ggatcgcgcg
     3181 tataaaaaac aaatgcacac accttttctc agcaacgatt tctttttaca caatttcaac
     3241 aaagacagcc ttcacaaacc ggtcgttaaa agccttgacg acattttgta ttataatact
     3301 tttcatcttg gcctgccgga actgctccgt tatgcggaca gaaattccat ggcacacgga
     3361 cgggaaataa gactgccatt tctcagccat gaactggttg aatttatgtt ctcgctgcca
     3421 gcagagttaa aaataaaaaa aggcttcaca aagtggatac ttcgtaaagc catacaaacc
     3481 tggttgcctg cagaaattgc ctggagaaaa gacaagacgg cttatgaacc gcctcagaaa
     3541 aaatggctgc aggatcccgc tattaaagaa atgataatgg aa
//
LOCUS       DASQJI010000465         3235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1744576,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000465 DASQJI010000000
VERSION     DASQJI010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744576"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /gene="rpmI"
                     /locus_tag="VEV83_12850"
     CDS             <1..254
                     /gene="rpmI"
                     /locus_tag="VEV83_12850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HYK46057.1"
                     /translation="RVPHEAETPAGSNLNKIIMPKVKTNSSAKKRFKVTGTGEITYQK
                     SFKRHILTKKSKKRKRVLGQKGLISSPNRDFVMRLLRLK"
     gene            339..683
                     /gene="rplT"
                     /locus_tag="VEV83_12855"
     CDS             339..683
                     /gene="rplT"
                     /locus_tag="VEV83_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HYK46058.1"
                     /translation="MPRSVNAVASRARRKNVLKQAKGFYGKRKNVYTVAKNIVEKGLT
                     YSYVGRKIKKRDYRQLWIARINAAVRAEGLTYSEFIHKLNVKGIEINRKILADLAMNE
                     PVSFKALIDSVK"
     gene            795..2222
                     /locus_tag="VEV83_12860"
     CDS             795..2222
                     /locus_tag="VEV83_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HYK46059.1"
                     /translation="MTNTYTSLVKQTFHFPQEDFNVNENGYLEFNGIDLKALIDKYGT
                     PLKLSYLPKIGAQINKAKKMFASAIKKHKYTGSYNYCYCTKSSHFSYVVEEALKHDIH
                     LETSYAYDIEIINQLYKKKKISKDTFIICNGFKQKNYTSRIARLINSGFNNVIPVLDN
                     KEELKSYRRSVKQNFKVGIRVAAEEEPTFPFYTSRLGIRAKDILEFYVDEIEGYEDKF
                     QLKMLHIFLNKGIKDDIYYWSELNKIINLYCQLKKICPELDSINIGGGFPIKHSLGFE
                     YDYQFMINEIVGNIKKACKKTNVPMPHIFTEFGSYTVGESMAHIYSVVGEKSQNDRER
                     WYMIDSSFITTLPDTWGIGEKFLLLPVNKWDNEYQRVVLGGMTCDSHDYYDSEEHINE
                     VFLPKIENENGNGNHANAEPLYVGFFHTGAYQDQISGYGGIKHCLIPSPKHVIVGCDK
                     SGKLTDWLHARQQSAQSMLKILGYL"
     gene            2285..2695
                     /locus_tag="VEV83_12865"
     CDS             2285..2695
                     /locus_tag="VEV83_12865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46060.1"
                     /translation="MKRKFTFIAFLLTFFSVACFAQQGGKKGMQQMKQELKDSLQLTD
                     TQADSVESIMTEFQPQIKGIMKDQSLSKDQKKQKIKPVKKQMVARLRTILSDEQIEKL
                     ERMQKDLRKGGGSKKGENPEPGEDTSQGSGVSES"
     gene            complement(2759..>3235)
                     /locus_tag="VEV83_12870"
     CDS             complement(2759..>3235)
                     /locus_tag="VEV83_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HYK46061.1"
                     /translation="VDEKSVVKGNNYTQAIEEAVKNEEAEILFISAAIESEIAAMDSF
                     EDRKMFLEDLGLKESGVVRLVRSTYHLLNLATYFTAGPQEVRAWTIHKGMLAPQAAGV
                     IHSDFEKGFIRAEVIKYDDFIRLGSEAACRDAGKLAVQGKDYLVEDGDIMHFRFNV"
BASE COUNT         1057 a          666 c          681 g          831 t
ORIGIN      
        1 caagagttcc gcatgaggcg gaaacgccag cagggagtaa tctaaataag attataatgc
       61 ctaaggtaaa aacgaactcc agtgccaaaa agcggttcaa agtaaccggc accggcgaga
      121 tcacgtacca aaaatctttc aagcgtcaca tcctaacaaa aaaatcaaaa aaacggaaaa
      181 gggtgctggg tcaaaaagga ctcatcagct ctcctaacag ggattttgtg atgcgccttt
      241 tgaggttgaa ataagagtca aaaccatcaa tccaattttc taacttttta gatggatgaa
      301 aatctaactc tgaaatctaa aatctaaaat attttaaaat gccacgttca gtaaatgccg
      361 tagcatcaag ggcaagaaga aagaatgttc ttaagcaggc aaaagggttt tatggcaaac
      421 gcaaaaatgt ttacacggtt gccaagaata tcgtcgaaaa ggggcttacg tatagctatg
      481 taggcaggaa gatcaagaaa cgcgattatc gtcagctgtg gatcgcccgt atcaatgcag
      541 ctgtaagagc agaaggctta acctacagcg agttcatcca taaactcaac gtaaaaggaa
      601 ttgaaataaa ccgcaagatc cttgcggacc tggcgatgaa tgagcctgta agtttcaagg
      661 ccctgatcga ttcggttaaa taaaagttag caatgaattt cgaatcccgc cgcggcggga
      721 ttttttattg ttgattattt caaacattta tttttgtaga cgttaataaa ccttttatgc
      781 cataacaacc aggaatgact aatacgtaca cgtcgcttgt aaaacaaacg tttcatttcc
      841 cgcaggaaga ttttaatgtc aatgagaatg gttacctcga gttcaatggt attgatctca
      901 aagccctgat cgataaatat ggaacacctt taaaacttag ctacctcccc aagattggtg
      961 cgcagatcaa caaggcaaaa aagatgttcg cttctgctat caagaaacac aagtataccg
     1021 gcagctacaa ttattgttat tgcaccaaga gttcacattt ttcttatgta gtagaagagg
     1081 ctctgaagca cgacattcac cttgaaacat cgtacgctta tgacatcgag atcatcaacc
     1141 aactttacaa aaaaaagaag atcagcaaag acacatttat tatctgcaat ggttttaagc
     1201 aaaagaatta tacttcgaga attgcgaggt taataaacag cggcttcaac aacgtaatcc
     1261 ctgtgctcga taacaaagaa gaattaaaga gctaccgtcg tagcgtaaaa caaaatttca
     1321 aggtgggcat tcgcgttgcg gcagaggagg aacctacatt tccgttctac acctcgcggt
     1381 tgggtatacg cgcaaaagat attctagagt tttatgttga cgaaatagaa ggatatgaag
     1441 ataaattcca gttgaagatg cttcatatct ttctaaacaa gggcattaaa gatgatatat
     1501 attactggag tgagttaaac aaaatcatca acctctattg ccagttgaaa aagatttgcc
     1561 ccgaactgga ttctattaat attggtggcg gctttcctat caagcactcg ctcggctttg
     1621 aatacgatta tcaattcatg ataaacgaaa ttgttggaaa tattaaaaaa gcctgcaaga
     1681 aaacgaacgt tcccatgccg catattttca cggaatttgg tagttacact gttggcgaaa
     1741 gcatggcaca tatttatagt gtggtcggtg aaaaaagtca aaatgatcgg gagcgttggt
     1801 atatgataga ttcttctttt atcacgacgt tgccggatac atggggcatt ggtgaaaagt
     1861 tcctgctatt gcctgtcaac aaatgggaca acgagtatca gcgtgtggtg ctgggcggaa
     1921 tgacctgcga tagccatgac tattacgatt cagaagagca cattaatgaa gtttttttgc
     1981 caaagatcga aaacgaaaac ggaaatggga atcacgcaaa tgcagagccc ttatacgtgg
     2041 gattctttca cacgggtgcg taccaggacc agataagcgg ctacggcggc ataaagcatt
     2101 gtttaattcc ttcacctaag catgttatcg taggctgcga taaaagtggc aaactaaccg
     2161 actggctgca tgccagacag cagtcggcac aaagcatgct taagatcctc ggttacctat
     2221 aattccagta tgaataaacc caaggcttca attttcgtcg tacaaattca taatttaata
     2281 tctcatgaaa agaaaattca ccttcattgc ttttctgctt acctttttta gcgttgcatg
     2341 tttcgcgcag cagggcggaa aaaaaggcat gcagcaaatg aaacaagaac tgaaagattc
     2401 tctgcaatta acggatacgc aggcggattc tgtagaatca ataatgactg agtttcagcc
     2461 gcagatcaag ggcatcatga aagatcagtc tttgtcgaag gatcaaaaaa agcaaaagat
     2521 aaaaccggta aaaaaacaaa tggtcgcccg gttgcggacg atcctttcag acgagcaaat
     2581 tgaaaagctc gagcgaatgc aaaaggacct gaggaaaggt ggaggctcaa agaaaggaga
     2641 aaaccctgag ccgggagaag acacctcgca gggatcaggc gtttctgaat cctgaattcg
     2701 aaatgaaagc taaatgaggt ctcggtgaga ccttttttgt tttgtggcta agacggaatc
     2761 acacattaaa cctgaagtgc ataatgtcgc cgtcttccac aaggtagtcc tttccctgca
     2821 ccgccagttt gcctgcatcc cggcacgcgg cctcgcttcc caatcttata aagtcatcat
     2881 acttgataac ctctgcgcgg ataaatcctt tttcaaagtc ggaatgaatt acgccggctg
     2941 cctgcggtgc caacatgccc ttgtgaattg tccacgccct aacctcctgc ggaccggcag
     3001 taaaataagt ggcaagattt aataaatgat aagtagaacg caccagtcgc acaacgccgc
     3061 tttcttttaa accgagatct tccagaaaca tttttctgtc ttcaaaactg tccatagcag
     3121 cgatctcact ttctatagcg gcgcttataa aaagaatttc agcttcctcg ttcttaactg
     3181 cttcttcaat agcctgggta taattatttc ctttcacaac agatttctca tcaac
//
LOCUS       DASQJI010000466         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_977082,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000466 DASQJI010000000
VERSION     DASQJI010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977082"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VEV83_12875"
     CDS             <1..470
                     /locus_tag="VEV83_12875"
                     /inference="COORDINATES: protein motif:HMM:NF019559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HYK46062.1"
                     /translation="EGTYNFAFGLASFLVVQVCYILFFYRTKSFAKKNASFLFVATLL
                     ILGYLVIMNYVFWPKVYYQNFIGPVVAYSFALGLMLLCAVNISNSKRFNKSAVYYFIP
                     GAVSFVASDSMIAANRFYFPPTRPLADYYTLGTYCLAQFLIVMGAIQVIRRKK"
     gene            complement(526..2160)
                     /gene="groL"
                     /locus_tag="VEV83_12880"
     CDS             complement(526..2160)
                     /gene="groL"
                     /locus_tag="VEV83_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611460.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HYK46063.1"
                     /translation="MAKQLFFEIEARNKMKKGVDIMANAVRVTLGPKGRNVVLEKKFG
                     APSITKDGVTVAKEIELEDSIENMGAQMLKEVASKTADIAGDGTTTATVLAQSIISEG
                     LKNVAAGANPMDLKRGIEKAVIAVVAHLKGQSQTVGSDAKKIQQVAAISANNDDNIGR
                     LIAEAFAKVGKDGVITVEEAKGTETGIEVVEGMQFDRGYISAYFVTNSEKMEAELEKP
                     YILIYDKKLSTMKDILPILEKVAQQGAPLLIISEDLEGEALATLVVNKLRGTLKVAAV
                     KAPGFGDRRKEMLLDIATLTKGIVISEEQGYKLENADLSYLGRADRVVIDKDNTTIVG
                     GQGKKEDIAARVNQIKAQIETTTSDYDKEKLQERLAKLSGGVAVLNVGAATEVEMKEK
                     KDRVDDALHATRAAVEEGIVPGGGTAFIRAIEALDALKNDSEDESTGINIVKRALEEP
                     LRQIVQNAGLEGSIVVQKVKEGKGDFGFNAHTEVYEKLYSAGVIDPTKVTRIALENAA
                     SIAGMLLTTECVVADKPEPKSAAAPAMPGGGMGMDY"
     gene            complement(2261..2545)
                     /locus_tag="VEV83_12885"
     CDS             complement(2261..2545)
                     /locus_tag="VEV83_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HYK46064.1"
                     /translation="MAKQDLKVTPLHDRVIVQPAPAEEKTAGGIIIPDTAKEKPQRGT
                     VVAAGPGKKDEPVTVKVGDTVLYGKYAGTEISIEGSDYLIMRESDILAIV"
BASE COUNT          664 a          657 c          560 g          849 t
ORIGIN      
        1 gtgagggaac ctataatttt gccttcggcc tggcctcttt cctggtggtg caggtgtgtt
       61 atatcttgtt tttttacagg accaaatcgt tcgcgaagaa aaatgcttct tttcttttcg
      121 tggcaacgct tcttatcctc ggttacctgg tgataatgaa ttatgttttt tggccgaagg
      181 tatactacca aaattttatt ggacccgtgg tcgcctattc gtttgcgctt ggcctgatgc
      241 tcctgtgtgc tgtgaacata agtaacagca agagatttaa caaatcagcc gtttactatt
      301 ttataccggg tgctgtaagt tttgtcgcct ctgactccat gatcgccgcc aaccggtttt
      361 actttcctcc aaccaggcct ctggccgatt attacacgct cggcacatac tgtcttgcgc
      421 agttcctgat cgtgatgggc gccatccagg taatacgaag aaaaaaatag caataaaaaa
      481 accgcccccg aggagcggtt ctttatataa aatccttttt gcttcttaat aatccatacc
      541 cattccacca cccggcattg ctggagcagc ggctgatttg ggttcaggtt tgtcagcaac
      601 cacgcattcg gtggtcaata acattcctgc gatagaagcc gcattttcca aagcgatgcg
      661 tgtaactttt gtcggatcaa ttaccccggc agaatacagt ttttcataaa cttccgtgtg
      721 ggcgttgaaa ccaaaatcac cttttccttc tttcactttc tgaaccacga tcgagccttc
      781 gagacctgca ttttgaacga tctggcgaag gggttcttca agcgcacgtt taacgatgtt
      841 gatgccggtg ctctcatctt cgctatcatt tttcagggcg tcgagagctt cgatcgcacg
      901 gatgaatgcg gtaccgccac caggcacaat gccttcttca actgcagcgc gtgtagcgtg
      961 cagtgcgtcg tccacgcggt ctttcttttc tttcatttca acttcagttg cagcacctac
     1021 gttcaatacg gctacaccac cactcaattt tgcaaggcgt tcctgcaatt tttctttgtc
     1081 ataatctgaa gtggtagttt cgatctgtgc cttgatctgg ttaacgcgtg cagcgatgtc
     1141 ctctttttta ccctgtccgc caacgatcgt tgtattgtct ttatcaatta caaccctgtc
     1201 agcacggcca aggtaagaga ggtcagcatt ttccagttta tatccctgtt cttcgctgat
     1261 tacgataccc tttgtcaatg tagcgatatc aagcaacatt tcttttctgc ggtctccaaa
     1321 gccaggagcc tttacagcag caaccttcaa tgtgccgcgt aatttgttta ctacaagtgt
     1381 tgccagtgct tcaccttcga gatcttcgga gatgatcaac aatggagcac cctgctgagc
     1441 aactttttct agtataggaa ggatatcctt catggtgctc agcttcttgt cgtagatcag
     1501 gatgtatggt ttttcaagtt cagcttccat tttttcgctg tttgtaacga agtaagctga
     1561 aatataaccg cggtcgaatt gcataccttc aaccacctcg ataccagtct cagtaccttt
     1621 tgcttcttcg acggtgatca caccatcctt tccaacctta gcgaaagctt ccgcgatgag
     1681 gcgaccaata ttgtcgtcgt tattagcaga aatagcagca acctgctgga tcttctttgc
     1741 gtctgaaccc acagtttggg actgtccctt caagtgtgca acaaccgcaa ttacagcttt
     1801 ttcgatgccc cgtttaagat ccattggatt tgcaccggca gccacattct ttaaaccttc
     1861 actgatgata gactgagcga gaacggttgc agtagtagtt ccgtctccgg cgatgtcagc
     1921 cgttttagaa gcgacttctt tcagcatttg agcgcccatg ttctcgatcg aatcttcgag
     1981 ttcgatctct ttagcaacgg ttacgccatc cttagtaata gagggagcgc cgaatttttt
     2041 ttcaagcact acattacgac ctttaggtcc caatgtaacc cttacagcgt tggccataat
     2101 gtcaacgcct tttttcattt tatttcttgc ttcaatttcg aagaagagtt gtttagccat
     2161 agttattaat ttgagaattt aaacaatttg agaatttgaa aattgctgaa aacctgaagc
     2221 cgctaacatt ttcaaattag cacatcttca aattttcaaa ttatacaatc gcgaggatgt
     2281 cgctttccct cataatgagg tagtctgagc cttcaatact gatctcagtg ccggcgtatt
     2341 tgccgtacag aaccgtatca ccaactttca cagtaacggg ctcgtccttt ttgccaggtc
     2401 ccgcggcgac aacggtgcca cgctgaggct tttctttagc agtatccgga ataataatgc
     2461 cgccagcagt tttttcttcg gcaggcgcag gttgcacaat tactctgtca tgaagcggag
     2521 taacctttag atcttgttta gccatagatg tataaatttt agttttaaac gaatgaggaa
     2581 aatcgcgcaa tcggcaacaa ttatgttgcc aatgcctttt aaaaggtcaa attttcacgt
     2641 agtctaatcg tttgacatat tcaaaagggg cacaaagaac gggtttactg tacgaatgac
     2701 aaaatttcac ttaatactta attcttaaaa
//
LOCUS       DASQJI010000467         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1590721,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000467 DASQJI010000000
VERSION     DASQJI010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590721"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VEV83_12890"
     CDS             complement(<1..304)
                     /locus_tag="VEV83_12890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46065.1"
                     /translation="MDQQLITYVLSNDSIHALFLTLIHSLWQGVVLAIAVGLILTLTK
                     RSTSAVRYNLLGGALLLFIIGSALTFYCEMKFNGKTSNAKITNITPETNYSSIITAS"
     gene            complement(314..718)
                     /locus_tag="VEV83_12895"
     CDS             complement(314..718)
                     /locus_tag="VEV83_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYK46066.1"
                     /translation="MKSSKKKAAEKKADPTKSELEILQVLWQYGPSTVRFVNDKLNEQ
                     TRKVQYTSTLKLMQIMNEKGMLKRDDTNMKHVYAPAEEEDKTKNYLLERFVNSMYHGS
                     ASSLVMQLLGNKKTSKKELKIIKEMLDNFDTE"
     gene            1041..>1783
                     /locus_tag="VEV83_12900"
     CDS             1041..>1783
                     /locus_tag="VEV83_12900"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF023636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH116 family glycosyl-hydrolase"
                     /protein_id="HYK46067.1"
                     /translation="MKQKPDRRSFLKNVSVAGVAGTLMPTEIISASENRAATTTNNNL
                     KNATGRKYNDIYTGDYLNRVAFPLGGMGAGMFCIEGTGSISHMSIRNKPDIFNTPEVF
                     AAISIKGLKNGAKLLEGPVPDWKKFGQRDAGNGSGGATTGLPHFHHARFKARFPFALI
                     QLTDEELPIEVEITGWSPFIPTEDDNSSLPVAAIEYKIVNKGTSPVDAIFSFNAKNFV
                     AVDDGKNSINKTANGFILSEAGTKEKPFL"
BASE COUNT          499 a          381 c          380 g          523 t
ORIGIN      
        1 cactcgctgt gataatcgag gagtaattcg tctcgggtgt gatattagta atttttgcgt
       61 tgctcgtttt gccattgaat ttcatctcac aataaaaagt caacgcggac cctatgataa
      121 acagcagcag tgcgccacca agaagattat acctcacagc ggaagttgac cgctttgtca
      181 aagtgagtat gaggccaacc gcgatcgcca gcaccactcc ctgccacagc gaatggatca
      241 acgttagaaa tagcgcgtgg atgctgtcgt ttgacagaac gtatgttatg agttgctgat
      301 ccataatcga actttattca gtgtcaaaat tgtcaagcat ttctttgatg atcttcaact
      361 cttttttcga agtctttttg tttccgagta attgcatcac taaactgctt gctgaaccgt
      421 ggtacataga attcacaaat ctttccagca ggtaattctt cgttttatct tcttcttcag
      481 cgggcgcata gacatgtttc atattcgtat cgtctctttt cagcattcct ttttcgttca
      541 tgatctgcat tagcttcagc gtggatgtgt actgcacttt ccttgtttgc tcattcaatt
      601 tgtcgtttac gaatcgtacg gtagacggac cgtattgcca caagacctgc aggatctcta
      661 attctgattt tgttggatca gctttctttt ctgctgcttt ctttttcgat gacttcatga
      721 agtaaaggta ggaattcttt cgtacgaaca aatttttatg ttaatttttt aaaaagaatt
      781 tgacttttct agaaaacctg cacgcacttt ttttaaggac ctcgaccagc tgggtatttg
      841 cttgccgcgc ccgttgtggt ccgtggtgat ctttgtgccc ctactttgaa ttgtgggcac
      901 actgtggaca agggaggcac gaatttcttc tcttcaatga gacgcagggg aagtttcggt
      961 tttagagcgg tcatttgtac taaatagaaa aaacatgttt aaattgttgc tgctcacacc
     1021 agaaactatt gcaacaaacc atgaaacaaa aaccagatcg cagatcattc ctgaaaaatg
     1081 taagtgttgc gggcgtcgcc ggcacattaa tgccgaccga aattataagt gcgtcagaaa
     1141 acagagcagc gacaacaaca aataataatt taaaaaatgc aacaggcaga aaatataacg
     1201 acatctacac cggcgactat ttaaatcgcg tcgcatttcc tcttggtggc atgggtgccg
     1261 gtatgttctg cattgaaggc actggttcta tttctcatat gtctattcgc aataagccgg
     1321 acatttttaa taccccggaa gtgtttgccg cgatctcaat aaaaggtttg aagaacggag
     1381 caaaactgct tgaaggacct gtacctgatt ggaaaaaatt cggacaacgc gacgcgggga
     1441 atggatcagg cggagcaacg acaggcttac cacattttca tcatgccaga ttcaaggcga
     1501 gatttccatt cgcattgatt caactaacag acgaggaatt gccgatcgaa gttgagatca
     1561 ccgggtggag tcctttcatt ccaaccgagg atgacaactc aagtttgccc gtagcggcga
     1621 tcgaatacaa aatcgtgaat aaaggcactt cacccgtcga cgcaattttt tctttcaacg
     1681 caaaaaattt tgttgctgtt gatgacggaa aaaattcgat caacaaaaca gcgaacggtt
     1741 tcattttatc ggaagcagga acaaaagaaa agccgttcct gaa
//
LOCUS       DASQJI010000468         2351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2359329,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000468 DASQJI010000000
VERSION     DASQJI010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2359329"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1749
                     /gene="rhaD"
                     /locus_tag="VEV83_12905"
     CDS             <1..1749
                     /gene="rhaD"
                     /locus_tag="VEV83_12905"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional rhamnulose-1-phosphate
                     aldolase/short-chain dehydrogenase"
                     /protein_id="HYK46068.1"
                     /translation="LHGFLPFKHIDHLHPDAAIAIAAAKDGKRITEELFDGTIGWVDW
                     QRPGFDLGLKLKKTVDENPGLRGIMLGSHGLFTWGDTAYESYMNTLEVIERCAEYLPP
                     SPKGGKETFGGQKIISLPKGQRLQKAAALAPILRGFCSNSDLQNPPSGIRGIGHFTDD
                     DRVLEFINSNDLERLAPMGTSCPDHFLRTKISPLVLNLSTDEDVNDVSAIKEKLKPQF
                     EEYRKMYADYYNSCKHSNSPAMRDANPVVILYPGVGMFTFAKDKQTARVAAEFYINAI
                     NVMKGAEAISEYTSLPRQEAFNIEYWLLEEAKLQRMPKPKALSGRIALITGSAGGIGK
                     AIAKKFAEEGACVVINDINEERMKSAMEEFQKQFGKDTAASVLLDVTKDDTIEEAFAA
                     ASLAFGGVDIIVNNAGISISKSIADHSTQDWDKLYDILVKGQFLVSKVGIEVMRKQNF
                     GGDIINIVSKNSVVAGPNNAGYGSAKAAQAHLTRLLAAELGGDKIRVNGVNPDAVIAD
                     SNIWAGGWAEGRAKAYGITVEELPAYYAKRTLLNETILPEDIANACFVFVGGLLSKST
                     GNTLNVDGGVAAAFLR"
     gene            1847..2161
                     /gene="rhaM"
                     /locus_tag="VEV83_12910"
     CDS             1847..2161
                     /gene="rhaM"
                     /locus_tag="VEV83_12910"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0062192 - L-rhamnose mutarotase activity
                     [Evidence IEA];
                     GO_process: GO:0019301 - rhamnose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HYK46069.1"
                     /translation="MQPVAFKMKLFKGCEDEYKKRHDEIWDELKELLKRSGIYDYSIL
                     LDETTNELFGYLQIDDAKKLDELPNEPVMKKWWAYMKDLMETNQDDSPVSVALKEVFY
                     LR"
BASE COUNT          727 a          445 c          597 g          582 t
ORIGIN      
        1 ttgcatggat ttcttccatt caaacatata gatcatttgc atccggatgc agcgatcgcc
       61 attgcggctg caaaagatgg gaagcgaata acggaagaat tatttgacgg caccatcggt
      121 tgggtagatt ggcaaaggcc aggctttgat ctcggcttga aactgaaaaa aaccgttgac
      181 gaaaatccgg gcttgcgcgg catcatgctg ggttcacatg gattattcac ctggggcgat
      241 acggcatatg aaagctacat gaacacactt gaagtgatcg aacgttgcgc ggaatattta
      301 cccccatccc ctaaaggggg gaaagaaacc ttcggggggc aaaaaattat ttcacttcct
      361 aaaggtcaac gtttacaaaa ggctgcagca ttggctccga tcttaagagg cttttgttca
      421 aacagcgatc ttcaaaatcc cccttcaggg attaggggca tcggccattt cactgacgat
      481 gaccgtgttc ttgaattcat caattcaaac gaccttgaaa gattagcacc aatgggcacg
      541 agctgtcccg atcactttct gcggacaaaa atttctccgc ttgttttaaa tctttcgact
      601 gatgaagatg taaacgatgt atcagcgatt aaagaaaaac ttaaaccaca gtttgaagaa
      661 tacagaaaga tgtacgcaga ctattacaat agctgcaaac attcaaatag tcccgccatg
      721 cgtgatgcaa atcccgtggt gatcttatat cccggcgtgg gcatgttcac atttgcaaag
      781 gataaacaaa cggcgagagt agctgcggag ttttacatca atgcgatcaa tgtaatgaaa
      841 ggtgcggaag cgatcagcga atacacatca ttgccgaggc aggaagcatt taacatagaa
      901 tattggctgc tcgaagaagc gaagctgcag cgcatgccga agccaaaagc gttgagtggc
      961 agaatcgcgt tgatcacggg aagcgcgggc ggcataggaa aagcgatcgc aaaaaagttt
     1021 gcggaagaag gagcgtgcgt tgttatcaat gatatcaatg aagaaagaat gaagagcgca
     1081 atggaagaat ttcaaaaaca gtttggaaaa gatactgcag cttctgtttt actggacgta
     1141 acaaaggatg ataccattga agaggctttt gcggcggctt cacttgcatt tggcggtgtt
     1201 gacattatcg tgaacaatgc cggcatcagt atttcaaaat caattgcaga tcattcaaca
     1261 caggactggg ataaactgta tgacatttta gtgaaggggc agtttctcgt ttcaaaggtt
     1321 ggcatcgagg tcatgcgtaa gcaaaacttc ggtggagata ttatcaatat cgtctccaag
     1381 aactccgttg ttgccggacc taacaatgcg ggctatggat cggcgaaggc tgcacaggca
     1441 catcttacac gtttgctcgc agcagaactc ggtggagata aaattcgtgt caacggtgtg
     1501 aacccggacg ctgttattgc agattcaaat atttgggcag gtggttgggc agaaggaagg
     1561 gcaaaggctt atggcatcac agtggaagaa ttgccagctt attatgcgaa gcgtacattg
     1621 ctcaacgaaa caattttgcc tgaagatatc gcgaatgcat gtttcgtttt tgttggagga
     1681 ttgttgagca agtcgacagg aaatacattg aacgtagatg ggggagtggc ggcagcgttt
     1741 ttgagatagt ctgaacgcag attttgggag atggtaaagg atcctaagga taattaaggt
     1801 acagcaactc tctccggcca gtgtgaggta aaaaaataat ttgtaaatgc aaccggtcgc
     1861 tttcaaaatg aaacttttca aaggatgtga agacgaatac aaaaagcgcc atgatgagat
     1921 ttgggatgaa ctgaaagagt tgctgaaaag atcgggtatt tatgactatt ctattttgtt
     1981 agacgaaaca acaaacgagt tgtttggtta tcttcagatc gacgatgcaa agaaattgga
     2041 tgaattgccg aacgagcctg ttatgaaaaa atggtgggca tacatgaagg accttatgga
     2101 aacgaatcaa gatgattcgc cggtaagtgt tgcactgaaa gaggtgtttt atttgcgttg
     2161 agccacgaag acgccaggac accaaggatc accaagagta tgttcgcaaa attacctgac
     2221 aaagaggaat acgtggctaa gcagacagtt gatataatga aagacggaat caagcgatta
     2281 atactttaaa acttcgtgcc accttgtgcc ttggtgcctt cgtggtttaa acaaccttac
     2341 aatgcgcatc g
//
LOCUS       DASQJI010000469         3272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_55249,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000469 DASQJI010000000
VERSION     DASQJI010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55249"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(481..1206)
                     /locus_tag="VEV83_12915"
     CDS             complement(481..1206)
                     /locus_tag="VEV83_12915"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK46070.1"
                     /translation="MKKGIVLSLATMICTAAIAQDKKTIEPSGNIITKEIAVKPFDAI
                     RAEGLYEMIITQGTNESVKVEADDNVQNLFVVRNNGNTLVIEMPELKDKNVDFKDKNE
                     HHSLKWKVYVSCKNLKSLDVAVIGNVRSGNAIKSSAFEIESKSVGNIDLELTAEKLTI
                     ENKGVGNLTLHGSATNAVVNNSGVGQFEGDNLVVQTMNIDNSGVGGANVNVQKDLKIK
                     QSFLGKVRNKGNAKTHEMDGVEM"
     gene            complement(1635..>3272)
                     /locus_tag="VEV83_12920"
     CDS             complement(1635..>3272)
                     /locus_tag="VEV83_12920"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46071.1"
                     /translation="SAKVNNATGIGKVKIVASSGKEQTVYETEIDVRNPNPYTTQVTE
                     ATLQPGQSWNSTVAMIGDQQSSKAVLEVSSIPAINLQQRLDYLITYPHGCIEQTTSAV
                     FPQLVLNQLMDLNPRQKAELERNIKYGLQRLNNFQQRDGGFSYWPNDGPSDEWGSNYA
                     GHFLLIASTKGYNVSQSMLQQWKQYERMKALAWNVTEAPWYGTDLTQAYRLYLLALAN
                     APELGAMNRLKEFKFLSPEAKWRLGAAYQLIGQPRVALELISGLPTSFPARPYPGMTF
                     GSSLRDQAMVLETLVTMKRLGEATQLVKSIAAQLSQETWYSTQTTAYSLIAIAEFSGG
                     SNNTQKIVVTGRSGNQNINIDSKSVIAQNAMAWQNGKAAVQLTNKGNNVLYVRVVNEG
                     KPISGENISVNNNPDILQVSVTYVNANGNAISIDSVKQGTDFVAKLVVTNPGRRGEYS
                     NLALSEIFPSGWEILNTRLYNSEGKFESSPSDYMDIRDDRVYYYFNLDYRESRTYYVQ
                     LNAAYLGKYYWPGVYCEEMYDHTISGGVKGKWVSVIE"
BASE COUNT          808 a          772 c          685 g         1007 t
ORIGIN      
        1 tctaaataat aaacccccga acatcggggg tttactttcg agatgtattt caaaggatac
       61 tattgtttga tgaacttttc aatcgatgcc acgctgaatt tacccgggca acagttaacc
      121 aacgagaggc aggaagcatt gggcttgttg gaagcgggat cggtattaat aactggcaac
      181 cattgcgggg ccagccaaaa aagacagcac agaattttga aaacatgtga tcgggtttgt
      241 aacgtgataa aacataaaag taattccttg cgctgaccgt ttacaaacgc agattgctgg
      301 accggtaaaa atggatttta aagccgtcaa tacgttcatt gattgatctg aaagatgctg
      361 actgcagaaa aacgaaggag aaagaaatgc cccttgaaag cggcgacgaa cgcccgcaaa
      421 tgaaaaagag gtctcgtgca tccgagacct ctgaaagatg ttaagtataa gcaagcgtag
      481 ttacatttct acgccatcca tttcgtgcgt tttcgcattg cctttgttcc tgactttgcc
      541 aagaaacgat tgtttaattt tcaggtcctt ctgaacattt acgttcgcac cacctacacc
      601 cgagttatca atattcatcg tttgcaccac gaggttatca ccttcaaact gaccaacgcc
      661 cgaattgttt actactgcgt ttgtcgcgct accatgcaaa gtgagatttc ccacgccttt
      721 gttttctatg gttaacttct ccgccgttaa ttcaaggtcg atgtttccta cgcttttact
      781 ttcgatctcg aaagcgctgc tttttatagc gttgccagaa cgcacgttcc cgataacggc
      841 gacatccagg ctttttaaat ttttgcagct tacgtacacc ttccatttta gcgaatgatg
      901 ctcattcttg tccttaaaat cgacattctt gtcttttagc tccggcatct cgataactaa
      961 tgtatttccg ttatttctga cgacgaacag gttttgaaca ttgtcgtcgg cttcaacttt
     1021 tactgattca ttagttccct gggtgattat catttcataa agaccttctg cccgaatagc
     1081 gtcgaaaggt tttacagcga tttcttttgt gatgatgtta ccacttggtt caatggtttt
     1141 cttgtcctgc gcgattgcag ccgtgcaaat catcgtcgca agcgaaagca caattccttt
     1201 tttcataatg caaattttag cgaaataacg aaaaatttcg tagaccaaaa aagttatcga
     1261 ttaaaggcat gaaaggcgga tgagcggagg aaagttttca ggcaggccgc gtgcaactgc
     1321 cggacgattg tatcattgca atgcattcaa tctttaagaa attacatctt gtgcactgcc
     1381 tcaaatattt ttttgaaata ttaataggag agtttcctat ctttatatcg ttttttaagg
     1441 gtttagggtt gaaaaacccc gcttagtctt aggcggggtt ttgttttgtt aattggttaa
     1501 ttaggctagt ggtttacttg gcgattcagt actcggccct aacatcaatt atccaaacgt
     1561 tggactcgtt gctatcgaac actcggccat tcgtgtcttc gtccaccacc ctaataaacg
     1621 aataacccaa taaactattc aatgacactc acccactttc cttttacccc tccgcttatc
     1681 gtatgatcat acatttcctc gcaatacacg ccgggccaat aatattttcc taagtatgca
     1741 gcattcaatt ggacataata ggttcggctt tcgcggtaat ccaggttgaa ataataatac
     1801 acgcgatcgt cgcgaatatc catataatca ctcggcgatg actcgaattt gccttcgctg
     1861 ttgtacaacc ttgtattaag tatctcccag ccactcggaa atatttctga aagcgcgagg
     1921 ttgctatact cgcctcttct ccccgggttt gttacaacca atttcgccac aaagtccgtt
     1981 ccctgtttta ccgaatcaat gcttattgcg ttcccgtttg cattgacgta cgtcacggat
     2041 acctgtaaaa tatccgggtt gttattaacg gaaatatttt ctccgctgat cggttttcct
     2101 tcgttgacaa cccgcacata cagcacgtta ttgcccttat tcgtcaactg cacggcggcc
     2161 tttccatttt gccatgccat tgcgttttgt gcgatgacgc tcttcgagtc gatatttata
     2221 ttttgattac cagacctgcc ggttaccaca atcttttgtg tgttgttgct gccgccggaa
     2281 aactccgcga tcgcgatcaa cgaatatgct gttgtctgcg tgctgtacca tgtttcctgc
     2341 gatagttgcg ctgcaataga tttcaccaat tgagttgctt cgccaagtcg cttcattgta
     2401 accaaagtct ccagcaccat cgcctggtcg cgcaggctgc tgccgaatgt cattcccgga
     2461 taaggtcttg ccgggaaaga agttggcaaa ccactgatga gttctaaggc gactcttggc
     2521 tgaccaatta gttggtaggc tgcgcctagt ctccattttg cttccggcga aagaaacttg
     2581 aattctttca aacggttcat cgctccaagt tcgggcgcat tcgcgagcgc gagaagatat
     2641 aatcggtacg cttgagtcaa atcagttccg taccatggtg cttcggtcac attccaggca
     2701 agtgctttca tgcgctcata ctgtttccat tgctgcaaca tgctctgcga aacgttatat
     2761 ccttttgttg aagcgataag caggaagtgc ccggcatagt tgctgcccca ttcatcgctt
     2821 ggaccgtcat tcggccagta actgaagccg ccatcccgtt gctgaaaatt attgagccgt
     2881 tgcaaaccat attttatgtt gcgttctaat tccgcttttt gacgcgggtt cagatccatt
     2941 aactggttta acacaagttg cggaaatacc gcagacgttg tttgttctat gcacccatgc
     3001 gggtaagtga tgagatagtc taatcgttgc tgcaggttga tggcgggaat acttgaaact
     3061 tccagcaccg ctttactgct ttgctgatcg ccgatcatcg caactgttga gttccagctt
     3121 tgccccggtt gcaaagtagc ctctgttact tgtgttgtat atggatttgg atttcgtaca
     3181 tcgatctccg tttcataaac agtctgttct ttgccgctcg atgcaacgat cttcactttg
     3241 ccgatgcccg ttgcattatt gacctttgcg ga
//
LOCUS       DASQJI010000470         2908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2666752,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000470 DASQJI010000000
VERSION     DASQJI010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2666752"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..766
                     /locus_tag="VEV83_12925"
     CDS             167..766
                     /locus_tag="VEV83_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HYK46072.1"
                     /translation="MIKTGNPIISIYTEMTPNPETMKFVANKLLYPGKSIDFQDESQA
                     GPSPLAKELFSFPFIKSVFIASNFVTLTKTPETEDWQDVIPSVKQFLKDYLEGGAPIL
                     YEEEVAKLKQDTGNVILSNDTDVVKRIKELLDNYVRPAVEMDGGAIQFKSYDDGIVNL
                     MLQGSCSGCPSSIVTLKAGIEGMMKRMIPEVKEVVAESE"
     gene            880..1944
                     /locus_tag="VEV83_12930"
     CDS             880..1944
                     /locus_tag="VEV83_12930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYK46073.1"
                     /translation="MHSRFTPLLSIILFLLIASCQSKDPKKEPPKTPPPVVDVIVAQP
                     QNVANVIEANGSIVANEFVELHPEVNGRITYLNVPEGKYVSRGTVIARINDADLVAQL
                     GKSQAALVLAEDNERRLRQLLDVHGVNQVDYDAAANLVISTKADIQYTKALIDKTIVR
                     APFDGVVGLRQVSPGAFVGTSDVIATMQQVHNLKLDFTVPEDYSSYVSTGSTVQVLLD
                     ASTDTIRHSAKIIAIEPQANTATRNLKVRALLQDNAKANPGAFVKVLIAQGATKQSIL
                     VPTNCIIPNDVAKQLIIVKNGAAQFTDVTTGVRLQGNVEITSGVSPGDSVVVTGVLFA
                     RDKKPVKVRHVKTLERADTD"
     gene            2180..2470
                     /locus_tag="VEV83_12935"
     CDS             2180..2470
                     /locus_tag="VEV83_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HYK46074.1"
                     /translation="MIQKTYFKTKDYCKVKLSFNYDNAETIAVLGLNNDWDNSILMNK
                     KKDGTFTCDVSLPKNSQHEFKYLVNDSIWLNEPEADQENPNVFGGSNSVLVV"
     gene            complement(2506..2853)
                     /locus_tag="VEV83_12940"
     CDS             complement(2506..2853)
                     /locus_tag="VEV83_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46075.1"
                     /translation="MKKYLILAGLFFAGFVLSNCHTSRKATASARKVTYTMDIQPLVA
                     ANCSPCHFPDKNGMKKPLNSYTAVKENIDSMLYRIQLNPTDRGFMPFKHPKLSDSVIT
                     VFKQWRDNGAPEN"
BASE COUNT          836 a          620 c          671 g          781 t
ORIGIN      
        1 gttgctaatt tatgtattga tccgcgtcat gaaaaagtcg ggcaggttaa atacttaaat
       61 gttgccgggt cctgcttttg cggatcacaa ataacaatcc ttttcttcct tcgtaaaccg
      121 cgttcggcga ttcttcgtta atttcgcagt tcctaaaaat tctagcatga tcaagacggg
      181 taatcctatt atcagcattt atactgaaat gacaccaaac cccgagacaa tgaaatttgt
      241 cgcgaacaaa ctattgtatc cggggaagag catagatttc caggacgagt cgcaggccgg
      301 gccgagcccc ctggcaaaag agctgttcag tttccctttc ataaaaagtg ttttcatagc
      361 cagcaatttt gtaacgctta ccaagacgcc ggagaccgaa gactggcagg acgtaattcc
      421 gtcggtgaaa caatttttga aagattacct ggagggcgga gcgccaatct tgtatgaaga
      481 ggaagttgcc aaactgaaac aggacaccgg caatgttatt ctcagcaacg acaccgatgt
      541 cgtaaaaaga attaaggaat tgctggataa ttatgtgcgg cccgcggtcg agatggatgg
      601 cggtgcgatc caattcaaaa gctatgatga tggtatcgtg aacctgatgt tgcaaggaag
      661 ttgcagcggc tgtccttcat cgatcgtaac gcttaaggct ggcatcgaag gaatgatgaa
      721 gcggatgatc ccggaagtga aagaagtcgt cgccgaatca gaatagaatt tttttctcac
      781 gcgaagacgc taagttggca aagaagcaaa gcttagcgtc tttgcttttc tgcactctaa
      841 acgttttgtg tttctatctt tgcgcctttg cgtgacatta tgcattcaag atttacgcct
      901 ctactttcga taatactttt tcttttgatt gcttcctgcc agtcgaaaga tccgaaaaag
      961 gaaccaccca aaacgccgcc gccggttgta gatgtgatcg ttgcacagcc tcaaaatgtt
     1021 gccaacgtta ttgaggcaaa cggcagcata gtcgccaatg aatttgttga actgcatcct
     1081 gaggtcaacg ggcgcattac gtacttgaat gttcccgaag gaaagtatgt cagcagggga
     1141 actgtgatcg cgcgcattaa tgatgcggac cttgttgctc agctcggcaa gagccaggcc
     1201 gccctcgttt tggcagaaga taatgaacgt cgccttcggc agttactcga tgttcacggt
     1261 gtgaaccagg tggattatga tgccgcagct aatctcgtta taagtacaaa agcggatatt
     1321 caatacacaa aagcgttgat cgataaaacg atcgtgcgtg ctccctttga tggagttgtt
     1381 ggtttaaggc aggtaagtcc cggtgcattc gttggcacat ccgatgtgat cgcaacaatg
     1441 cagcaagtgc ataatctaaa gctggatttt acagtaccgg aagattatag tagttacgtc
     1501 tcaacgggct caactgtgca ggtattactg gacgcatcaa ccgataccat acgacattcc
     1561 gcaaagatca tcgccatcga accacaagcc aacacggcaa cacggaattt gaaagtccgt
     1621 gcattgctac aagacaacgc gaaggcaaat ccgggggcat ttgtaaaagt tttgattgcc
     1681 cagggtgcca caaaacagag catactcgta ccgacaaatt gtataatccc aaacgacgta
     1741 gccaagcaat tgatcatcgt gaaaaacggc gctgcgcaat tcactgatgt aacaacaggc
     1801 gttcgtcttc aaggcaatgt ggagatcaca agcggtgttt cgccgggtga ttctgtggtt
     1861 gtaacaggtg tcttgtttgc gcgggacaaa aagcctgtga aggtgagaca tgttaaaacg
     1921 ctcgagcgtg cagatacgga ttagcattcg ttgttaccat tccctggaat aatttgttag
     1981 tctaaccaat gagccgaatt ttttttcacc ctcttcaagc aacaatccag gctcgataac
     2041 aaacgtgcgt ttgcagcaag ttccagtcgt tttcataatt tatcaacggc ctgtgtataa
     2101 atcagaacca tttcgaggtt agccttattt ttgcgcatcg ttgaaaaaaa attatttgta
     2161 atactaaaat cttaattata tgatacagaa aacttatttc aaaacaaagg actactgcaa
     2221 agtgaaactc agcttcaact acgataacgc tgaaacaatt gcggttttag ggctgaataa
     2281 tgactgggac aactcgatcc tgatgaataa gaaaaaagac ggcacattca cctgcgatgt
     2341 ttcgcttccg aagaacagcc agcacgagtt taaatacctc gtaaatgatt ccatttggct
     2401 gaacgaaccg gaggcagatc aggaaaatcc aaacgtcttt ggaggcagca acagcgtgct
     2461 cgttgtttaa tccgaattaa tcatccttca agcgtcattt caaaattaat tttctggcgc
     2521 accgttatcc cgccattgtt tgaaaacggt gataacactg tcgctcagct tggggtgttt
     2581 gaaaggcata aagcctctgt ccgtaggatt taattgaatg cggtacagca tgctgtcaat
     2641 attctctttc accgctgtat agctgttcaa aggctttttc attccatttt tatcaggaaa
     2701 gtgacacggt gagcaatttg ctgctacgag cggttggata tccattgtat aagttacttt
     2761 tcgggccgat gcggtcgctt ttcttgacgt atgacagttt gagagaacaa aaccagcgaa
     2821 gaaaaggccc gcaagaatga gatacttctt catgcattaa aattttgtcg gtaaatatat
     2881 ttatttaagt tttcgaaagt ttggacag
//
LOCUS       DASQJI010000471        10863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2053442,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000471 DASQJI010000000
VERSION     DASQJI010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10863
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053442"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VEV83_12945"
     CDS             complement(<1..329)
                     /locus_tag="VEV83_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK46076.1"
                     /translation="MAEVGDAEHGLKRSLGPGAVIALGIGAIIGAGLFARTAVAAAQN
                     AGPSVTLAFIVAAVGCAFAGLCYAEFASMIPIAGSAYTYSYATMGELIAWIIGWDLII
                     EYGVGAAT"
     gene            497..1729
                     /locus_tag="VEV83_12950"
     CDS             497..1729
                     /locus_tag="VEV83_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HYK46077.1"
                     /translation="MKKTNRLTAYILVAMLLGAVVGYLVYTQGTPDFKNSFSDKISLL
                     TTIFLRLVQMIIAPLVFCTLVVGIAKLGDLKTVGRVGGKALLWFISASLASLLLGMLL
                     VNILKPGVGIDLSSASTDAVKDLRGNTQAFTLQHFIEHVFPKSLAQAMADNEILQIVV
                     FSIFFGVAATAIGDFAKPLIRALDTASHVILKMVGYIMKFAPIGVFGALAGVIALRGF
                     DIFIFYLKYFGSFLFGILCLWILLLGVGYIILNKRLPRLIRHIVEPLIIAFSTTSSEA
                     VFPKLTEELERFGCKDKIVSFVLPLGYSFNLDGSMMYMTFASIAIAQAYNIPLDLGTQ
                     LTMLLVLMLTSKGIAGVPRASLVVVLATCSMFKIPAAGVALILPIDHFCDMFRTATNV
                     LGNSLATSVVSKWEKALV"
     gene            1745..2461
                     /locus_tag="VEV83_12955"
     CDS             1745..2461
                     /locus_tag="VEV83_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HYK46078.1"
                     /translation="MEIFFLDFQWHDLINPQFYIEFGGLWLLLFVIFAETGLFAGFFL
                     PGDSLLFVAGIYSHMNDRGEPGLAYEFLKLIGLGGVRNEWLDLFVLWMLISAAGIAGN
                     ALGYWFGKKSGPFLYERKDTFLFKKKYLQEATDFYHRFGGWAIVAARFVPIIRTFAPI
                     VAGVVKMDWKKFTYFSVAGCLAWVASMLLAGHFLDKWIQTQFGIDLKDHLELIVITIV
                     LVSTLPIIYKFFFAKEKTDS"
     gene            2464..3702
                     /locus_tag="VEV83_12960"
     CDS             2464..3702
                     /locus_tag="VEV83_12960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46079.1"
                     /translation="MLATNNRQRSLITVPVLVAALGYFVDIYDLLLFSIIRITSLKGI
                     GVTDPDALRNYGEKIISWQMYGLLLGGIIWGVVGDKKGRISVLFGSILLYSIANIANG
                     FVHTVDQYAMVRFIAGLGLAGELGAGITLVSELTSKEKRGLATSLVAGLGLTGAILAY
                     FIKLNFEWRTCYFIGGGLGIALLILRVSVFESGMFHEVKKMNVQRGNVLMLFATRERF
                     KRYLFSILLGLPSWYVVGILMTFSNDFGKAMHIADTIDPAKAVMYSYVGVSIGGIVTG
                     LVSQKLQSRLKTLQIFYGITALGILLFFTIQYNGTATTMYILAWLLGFGTGFWAMFVT
                     VGAEQFGTNLRATAATTIPNMVRGTLPLIILLFQWLRGVTGSYTTGAWIAGIIVMAIS
                     IAASFGLKETFHRDMNFLEE"
     gene            complement(3778..5694)
                     /gene="dnaK"
                     /locus_tag="VEV83_12965"
     CDS             complement(3778..5694)
                     /gene="dnaK"
                     /locus_tag="VEV83_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HYK46080.1"
                     /translation="MGKIIGIDLGTTNSCVAVMEGNEPVVIANDEGRRTTPSVVAFLK
                     NGERKVGDPAKRQAITNPHNTIMSVKRFMGRRHDEVTEEISHWSYKVVKGDNNTVRID
                     IDGRLYTPQEISAMILQKMKKTAEDYLGQEVNEAVITVPAYFNDAQRQATKEAGEIAG
                     LNVRRIVNEPTAAALAYGLDKKHKDQKIAVFDLGGGTFDISVLELGDGVFEVKSTNGD
                     THLGGDDFDKVTMDWLADEFKKQEAIDLRKDPMALQRLKDAAEKAKIELSSSSETEIN
                     LPYITAVDGVPKHLVVKLTRAKFEQLADNLFARCLKPCEQALKDAGYNASQIDEVILV
                     GGSTRIPKVQELVEKFFGKKPHKGVNPDEVVAVGAAIQGAVLTGEVKDVLLLDVTPLT
                     LGIETLGGVLTPMIPSNTTIPTKKTEVFSTASDSQPGVQIHVLQGERSLAKDNKSLGI
                     FNLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQKIRIEAGSGLSKEEIEK
                     MKTEAKAHESEDKTAREKIDKLNHADSLIFQTEKQLKEFGDKIPADKKGPIESALTKL
                     KDAHKSQDVAAVDAATNEMNQAWTAASEEIYKAQQAGPGGQAGPSQGGQQPDDGNAQQ
                     GGETVTDAEFEEVK"
     gene            complement(5811..6419)
                     /locus_tag="VEV83_12970"
     CDS             complement(5811..6419)
                     /locus_tag="VEV83_12970"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HYK46081.1"
                     /translation="MLLHMADVTRARRHIATVVDCLINGGVIIYPTDTIYGLGCDIFQ
                     QAAIEKICRIKKVRPEKAQLSFVCYDLSDLSHYTKSISTPLYRVLREYLPGPYTFILP
                     ASKEVPRILKSKKNTIGLRIPDNNIAREIVKALHHPILSASLPGDMVEEYTDPELIYE
                     NFRGIADIVIDGGPGGMIPSTVIDCTKEELEVVRMGAGNWDE"
     gene            6527..7138
                     /locus_tag="VEV83_12975"
     CDS             6527..7138
                     /locus_tag="VEV83_12975"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HYK46082.1"
                     /translation="MDIVTRAKNMITNPKVEWDVVAAEQPNTSRIIMQYVLPLTVLGA
                     IAAFIGYGLIGFSILGVHVGGVSWGIYYAIDKIVIGILSVFITAYVVDLLAPSFGSEK
                     NLGRSIQLVSYGGTPALLAAIFAILPFIAGIVAIAGAVYSVYLWYLGLGPIKKTPEDK
                     KVAYLIVAFLVLIVVYFLIGMILSRLLWPVFGIGYGSYGSYGM"
     gene            7175..7906
                     /locus_tag="VEV83_12980"
     CDS             7175..7906
                     /locus_tag="VEV83_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HYK46083.1"
                     /translation="MSDTTRIIPAKEQVYLEGPKSRSYELAFAAKVWMQFIKGFRQLH
                     FVGPCITVFGSARFKEDHAYYQKAREFGKRIADIGFTTMTGGGPGIMEAANRGAYENG
                     GMSIGCNIKLPFEQKPNKYVNKTVTFDFFFVRKTLLIKYSYAFICMPGGFGTMDEFFE
                     TLTLVQTRIITQFPIILFGTAFYAKLGEVMKSMVQQGTIDPDDLKLVLITDSIDEAMA
                     HIQTYITGNYKVRPRKRLWWLLERR"
     gene            complement(7945..9501)
                     /locus_tag="VEV83_12985"
     CDS             complement(7945..9501)
                     /locus_tag="VEV83_12985"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK46084.1"
                     /translation="MPLPTTSFRKTNQLLYILALLKVVIPYFLQNPVYEPHRDEFLYL
                     AEGHHLAWGFMEVPPLLSVFAWLTNLFGGGMFWVKLWPSLFGAATFILAGKIVVSLGG
                     RNFALLLLFLAFMFSAYLRVFFLFQPNAPEIFFWTLIAFSLVRFTQTKSNQWLYLFGV
                     SAGIGMLSKYSVAFFTASVLLGLLMTKYRTVFLNKHFWYAAVIGLLIFLPNFFWQYKN
                     SFPVIHHMKELQETQLQYISPVSFLTDQLVLILPCAFVWLTGLFYVLFSKEGKYRFLG
                     FAYLFVILLLVIGHGKNYYSLGVYPALLAFGSYALEKYTAVKRRALRYMFVIIPLLIG
                     LLFLPVALPMLPPQQLADLYVKFHTEKTGLLKWEDLKNHPLPQDFSDMLGWEEMTQKV
                     AKAYGTLSDSEKMNTVIFCDNYGMAGAVNYYGKKYHLPPAYSDNASFLYWLPENASFK
                     NIVLVTSDHHEKEHDFAKDFQSITISDSVTNVFARERGDWIYVFKGANDNFSKYFQKK
                     LADDKAEFNY"
     gene            complement(9530..>10863)
                     /gene="gltX"
                     /locus_tag="VEV83_12990"
     CDS             complement(9530..>10863)
                     /gene="gltX"
                     /locus_tag="VEV83_12990"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HYK46085.1"
                     /translation="CLKWCRLEPDESPFHGGSFGPYRQSERKNIYKQYAEQLVVQGNA
                     YYGFDTPNELDEKRKAIANFQYNHASRTEMKNSLSLSNDEIKKLLDNNTPHVIRIKMP
                     ENEKISFTDLIRGDVHFDSSQVDDKVLLKADGMPTYHLAVVVDDYLMQITHAFRGEEW
                     LPSSPVHVLLWKYLFGLDVMPQWAHLPLILKPDGHGKLSKRDGDRLGFPVFAMNWTDP
                     KTKELTHGFREKGFLPEAFVNMLALLGWNDGTDQEIFSIDELIEKFSMDRVHKGGAKF
                     DFEKAKWFNHEWMRKLPVSSYRMEIRKIFEQQHIFIDDDEKFEKVLDLVKDRCTLLPD
                     FVEQGAFFFVALKEINLSSVKPKWSAQKNQFFIELIRAFELFSTWQRDELERTFKEMT
                     AVHQMKPGELLLPLRIMLVGGKYGPGVFDVAAVLGKDETLNRIKHVLEMLK"
BASE COUNT         2826 a         2417 c         2395 g         3225 t
ORIGIN      
        1 gtagctgcgc ccaccccgta ctcaattatt aaatcccacc caatgatcca tgctattaat
       61 tctcccattg ttgcataaga atacgtatag gcactcccgg caatcggtat catagaagcg
      121 aattccgcat aacacaaacc agcaaatgca cagcctacag ctgctactat aaaagctaac
      181 gtaacgctcg gccccgcatt ttgtgctgca gctactgccg ttctcgcgaa taatcccgca
      241 ccgataatcg caccaatacc taatgcaatt acagcgcctg gtcctaatga acgtttcaaa
      301 ccatgctccg cgtcacctac ttccgccatg agaaggggta aggatttttt tctgaaaaga
      361 ttcataagct cgtttattta cgaattggaa aagtaaggaa tttatttttt tgacattgaa
      421 atcttttatc cgcatatgca cacgcttcat cagttggact tattaatgtt atattgcgat
      481 tcatttttta ttgtgtatga agaaaaccaa ccggctcact gcatatattt tggtcgcaat
      541 gttgttgggt gctgtagttg gctatctggt atacacacaa ggaacgcccg atttcaaaaa
      601 ctctttttct gataagatca gtctccttac tacgatcttt cttcgtttgg tgcaaatgat
      661 catagcgcca cttgtcttct gcacgctcgt tgtagggatc gcaaaacttg gcgatttaaa
      721 aacggttgga agagtcggtg gcaaggcatt gttatggttc atatccgcat ctctcgcaag
      781 tttgttgctt gggatgttgc tcgtaaatat tttaaagcct ggcgtaggga ttgacctgag
      841 cagcgccagc acagatgctg ttaaggatct tcgcggtaac acgcaggctt ttacattaca
      901 acatttcata gaacatgttt ttccaaaaag tcttgcgcag gcaatggctg ataacgagat
      961 attgcagatc gtagtgttca gtattttctt tggtgtcgca gcaacagcca ttggcgattt
     1021 tgccaagcct ttgatcaggg cgctcgatac ggcttcacat gtaattttaa aaatggttgg
     1081 atatataatg aagtttgcgc ctatcggggt tttcggagca cttgcaggtg tgatagctct
     1141 aaggggattt gacattttta ttttctattt aaaatatttt ggttcattcc tgttcgggat
     1201 tctttgcctt tggatattgt tgcttggggt tggatacatt atactcaaca agcgtttgcc
     1261 acgactcata cgacatattg ttgaaccgct tatcatcgca ttcagcacga ccagcagtga
     1321 agccgtgttt cctaaattga cggaagaact ggaacgattt gggtgtaagg ataaaatagt
     1381 ttcatttgtt ttaccgctcg gctattcgtt caatctcgac ggcagtatga tgtatatgac
     1441 gtttgcgagt attgctattg cgcaggcata caatatacca ctcgacctgg gcacacagct
     1501 caccatgttg ctggtgttaa tgctgacgag caaaggcatt gctggtgtcc cgagagcgtc
     1561 gcttgttgtg gtactggcaa catgcagcat gtttaaaatt cccgctgcgg gcgttgcctt
     1621 aattttaccg atagatcatt tttgcgacat gtttcgcaca gccacgaacg ttctcggaaa
     1681 ttcgttggca accagtgttg tgagcaaatg ggaaaaagcg ttggtgtaaa gattgtaaaa
     1741 gagtatggaa atattttttc ttgactttca gtggcacgac ctcatcaatc cccagttcta
     1801 tattgaattt ggcgggctat ggttattatt gttcgtgata tttgcggaga caggtttatt
     1861 tgcaggtttc tttttgcccg gtgatagttt gctttttgtc gccggtatct acagccatat
     1921 gaacgaccgc ggcgaacccg ggcttgcata cgaattcctc aaattgatcg gactcggcgg
     1981 cgtgagaaac gaatggctcg atttgtttgt tttatggatg ctgatctccg ccgcgggtat
     2041 tgccggcaat gcactgggat attggttcgg caaaaaaagc gggccgttct tgtatgaacg
     2101 aaaggatact ttcttgttca agaaaaaata cttgcaggaa gctacagatt tttatcaccg
     2161 gtttggcgga tgggcaatag tggctgcgcg gtttgttccg atcataagaa cgttcgcacc
     2221 gatcgtagca ggcgttgtaa aaatggattg gaaaaagttt acgtatttca gcgtcgcggg
     2281 atgtctcgcg tgggtagcaa gcatgttact cgccggccat tttttggata aatggataca
     2341 aacacaattt ggtattgacc taaaagatca ccttgagcta attgtaataa cgatcgtgct
     2401 tgtctctact ttgccgatca tttataaatt cttttttgca aaagaaaaaa ccgattcata
     2461 acaatgcttg ctacaaataa caggcaacgt tcattgatta ccgtgccggt gcttgtcgca
     2521 gcactcggct attttgtcga catctacgat ctgctgttgt ttagcataat tcgaatcacg
     2581 agccttaaag gcattggggt aacagatcct gatgcattaa gaaattatgg tgaaaaaatt
     2641 attagctggc aaatgtatgg cttgctgttg ggcggaatta tctggggagt cgtgggtgat
     2701 aaaaaaggaa ggataagcgt tttgtttggc tcaatacttc tgtattcgat cgcaaatatt
     2761 gcaaatggtt ttgtgcatac ggtggatcaa tacgccatgg tgcgatttat tgcaggactt
     2821 ggattagcag gcgaattggg tgcaggcatc acgctggttt ctgagttgac ctcaaaggaa
     2881 aaacgcggcc ttgcaacatc actggtggcc ggcctgggac ttacgggcgc catccttgct
     2941 tattttatta aattaaattt cgaatggcgc acctgttact ttattggcgg aggactgggg
     3001 atcgctttgc tgattttgcg cgtctctgtt tttgagtcgg gcatgtttca tgaagtgaaa
     3061 aaaatgaatg tgcagcgtgg aaatgttttg atgctgtttg ccacgcgtga acgatttaag
     3121 aggtacctgt ttagtatttt gcttggattg ccttcgtggt atgttgtagg catactcatg
     3181 accttctcaa acgatttcgg gaaggcaatg catattgcag atacgataga tccggcaaaa
     3241 gcggtaatgt attcgtacgt tggtgtttcc attggcggca ttgttacagg attggttagc
     3301 cagaagctgc aaagtcgtct taaaacactc cagatattct atggaataac tgccttgggg
     3361 attttgctct ttttcacaat acaatacaac ggcacggcaa caacgatgta cattcttgcg
     3421 tggctgcttg gctttggcac cgggttctgg gccatgtttg tcaccgtcgg tgcggaacaa
     3481 tttggaacga atttgcgcgc aactgctgca accacaatac ccaacatggt tcgcggtacc
     3541 cttccgctga tcattttgtt atttcaatgg ctgcgtggtg ttaccggcag ttataccaca
     3601 ggcgcatgga ttgccggtat cattgttatg gctatcagca tcgctgcatc attcggtttg
     3661 aaggaaactt ttcacaggga tatgaatttt cttgaagaat aaacagtttc cgccaaaaag
     3721 aaaaagcccc gcttatgcag ggctttattc atttatcact cttaactcaa ctatcgctta
     3781 tttcacttct tcaaattcag catcggtgac tgtttcacca ccttgctgtg cgttcccatc
     3841 atcgggctgt tggccacctt gtgaagggcc ggcctgacca ccaggtcctg cttgctgtgc
     3901 tttgtatatt tcttcgctgg ctgcggtcca tgcctggttc atttcattcg tagctgcgtc
     3961 aacggcggct acatcctggc ttttatgagc gtctttcaat ttagtcaacg cactttcaat
     4021 tgggcctttt ttatcggccg gtatcttatc accgaattct ttcaattgtt tttcagtttg
     4081 gaatatcaag ctatccgcat gattaagttt gtcgatcttt tcgcgtgcag tcttgtcctc
     4141 agattcatga gccttagctt ccgttttcat cttctctatc tcttccttac tcaaaccact
     4201 acctgcctcg atccgtatct tctgttcttt gccggtgcct ttgtcttttg cactaacgtg
     4261 taaaatacca ttggcgtcga tatcgaaagt cacttcaatt tgcggcacac ctcttggcgc
     4321 cggtggaatg ccatcaaggt tgaaaattcc aaggctctta ttatccttcg ccaaacttct
     4381 ttcaccctgc aaaacgtgta tttgcacacc cggctggcta tcgctggcgg tagaaaatac
     4441 ttcagttttc tttgtcggta tggttgtatt cgagggtatc atcggagtta acacaccgcc
     4501 gagtgtttcg atacctaatg taagcggtgt tacgtccagt aaaagcacat cttttacttc
     4561 gccggtcaac acagcacctt gtatcgctgc accaaccgca accacttcat cgggatttac
     4621 gcctttatgc ggctttttgc cgaagaattt ttcgaccaat tcctgaacct taggaatacg
     4681 cgttgaaccg cccaccagga tcacctcgtc gatctgcgaa gcgttgtaac ctgcgtcttt
     4741 caaagcttgc tcgcagggct ttaaacatct tgcgaagaga ttgtctgcaa gctgctcaaa
     4801 ctttgcgcgc gttaacttca caacaaggtg tttgggcaca ccgtcaaccg cagtgatata
     4861 aggaagattg atctcagttt cagaggaaga cgataattcg atctttgcct tttcggcagc
     4921 gtctttcaaa cgttgcaagg ccatagggtc tttgcgaaga tcgatcgctt cctgcttttt
     4981 gaattcatca gccagccaat ccatcgtcac cttatcaaaa tcgtcaccac ccaaatgcgt
     5041 gtcgccgttt gttgacttca cttcaaaaac gccgtcacca agttcaagga cggaaatatc
     5101 gaaggttcca ccaccaagat cgaatacagc gatcttttga tctttgtgtt ttttgtcgag
     5161 accataagcc agcgctgcgg cggtgggctc gtttacaatc ctgcgaacat ttaagccggc
     5221 aatttcgcct gcctctttag ttgcctgtct ttgcgcatcg ttgaaatagg caggaactgt
     5281 gatcactgct tcattcactt cctggccgag ataatcttcc gcggtttttt tcatcttctg
     5341 caagatcatc gcagagattt cttgcggagt atacaggcgc ccgtcaatgt ctatacggac
     5401 ggtattatta tcgcctttca ctactttata gctccagtgg cttatttctt ctgttacttc
     5461 atcatgccgg cgccccatga aacgtttcac gctcataatg gtgttgtgcg gattcgtgat
     5521 tgcctgtcgt tttgcaggat cacccacttt ccgttcgccg tttttcagga acgccacaac
     5581 agatggcgta gtacggcgac cttcatcgtt ggcaataaca acaggttcat tgccttccat
     5641 taccgctaca caactgttgg tggtccctaa gtcgatgcct ataatttttc ccatatattt
     5701 tttctttaag gttaaattta acgtcattaa tgctcaatca ttatgccatg ggcgactaag
     5761 atgcaaaatt ggcaggagca ataaaggtaa tttggccact gatgaggctg ttattcgtcc
     5821 cagttgcctg cgcccatgcg gacaacttcc aactcctctt tagtgcagtc gataacggtg
     5881 gaaggaatca ttccacctgg cccgccatcg atcacaatgt cagcgatgcc cctaaagttt
     5941 tcatagatca attcaggatc cgtgtattcc tcaaccatgt cgccgggtaa agaagcagat
     6001 aaaatgggat gatgtagcgc tttcacgatt tcacgcgcaa tattattgtc cggtatgcgc
     6061 aggccgatcg tgttcttttt gcttttcaga atgcgcggca cttctttgct ggctggtaaa
     6121 ataaatgtat acggtcccgg cagatattcg cggagtacac ggtataaagg tgttgagatg
     6181 ctttttgtgt agtgactaag atcgcttaaa tcgtaacaaa cgaaactcaa ttgcgccttt
     6241 tccggtcgca ccttttttat acggcaaatt ttttcaattg ctgcctgctg gaaaatatca
     6301 caacctaacc cgtagattgt atccgtgggg taaattatca caccgccatt aataagacag
     6361 tcgacgacag ttgctatatg acgccgggca cgagtaacat cggccatatg gaggagcatg
     6421 agataaactt aaccaaaatc atgcatttgc agaattatca tgcgaaatat tgtccggtgt
     6481 cgcgtaatga aatttgaatt cggtatcttt tcttcaaaaa tgttttatgg atatcgtaac
     6541 ccgcgcaaaa aatatgatca ccaatcccaa agtggaatgg gatgttgttg ccgctgagca
     6601 accaaatact tctcgaatta ttatgcaata tgtactgccg cttacggtgc ttggtgccat
     6661 agccgcattt attggatatg gcctgatagg tttcagcatt ttgggcgttc atgtgggagg
     6721 agtcagttgg ggtatctatt atgcgatcga caagatcgtc attggcatac ttagtgtttt
     6781 catcaccgct tatgttgtag atctccttgc accctcattt ggttcagaaa aaaatctcgg
     6841 cagatcgata caacttgttt catatggcgg aacgcccgca cttctcgcag cgatctttgc
     6901 gatcctgcca ttcatcgcag gcattgttgc catcgccggc gctgtttatt ctgtttatct
     6961 ctggtacctt gggttaggac ccatcaaaaa aactcctgag gacaaaaaag tggcgtacct
     7021 catcgtggcg ttccttgttc tgatagttgt gtatttctta atcggcatga tattatcgag
     7081 attgctatgg ccagttttcg gcatcgggta tggttcttac gggtcgtacg gaatgtaatt
     7141 ttagcgggga cctgcagcaa aggatatttt taagatgagt gacacaacac gtatcattcc
     7201 tgccaaagag caggtttatc tggagggtcc caaaagccgc agctacgaac ttgctttcgc
     7261 tgcgaaagtt tggatgcaat ttataaaagg atttcgtcaa ctccattttg ttggtccctg
     7321 tatcactgtt tttggctccg cacgtttcaa agaagatcat gcgtattatc aaaaggcgag
     7381 ggaatttgga aaacggatcg cggacatcgg tttcacaact atgaccggcg gtggccccgg
     7441 catcatggaa gcggcgaacc gcggcgccta tgaaaacggc ggcatgtcga tcggttgtaa
     7501 tatcaagtta ccatttgagc agaagccaaa taaatacgtc aataaaacgg tgacgttcga
     7561 ctttttcttt gtgcggaaga ctttgctcat aaaatattct tacgctttta tttgcatgcc
     7621 cggcggcttt ggaaccatgg acgaattttt cgagacgcta acgctggtcc aaacgaggat
     7681 catcacgcag ttcccgatca ttctgtttgg aactgcattt tatgcaaagc ttggggaagt
     7741 catgaaaagc atggtgcagc agggcacgat cgacccggat gatctgaagc tggttttaat
     7801 aactgatagt attgatgaag cgatggcaca tattcaaacc tacataaccg gtaactataa
     7861 agtgaggccg cgtaagagat tgtggtggtt gctcgaacga agatgaatat tcacgtcaag
     7921 cccaactttg aaagcgctcg tagtttaata attgaactcc gctttgtcat cggcgagttt
     7981 cttttgaaag tatttactga aattgtcgtt cgcaccttta aaaacatata tccaatcgcc
     8041 gcgttctctt gcaaaaacgt tcgttacgct gtccgatatt gttattgatt gaaagtcttt
     8101 cgcaaagtca tgttcttttt catgatggtc gcttgttaca agaacaatat ttttaaagct
     8161 tgcattttcg ggtaaccagt agagaaaact tgcattatcg ctgtacgctg gaggcagatg
     8221 atattttttc ccgtaataat ttaccgcacc ggccattccg taattatcgc agaagatcac
     8281 cgtgttcatt ttttcggagt cgctcaatgt tccataagcc tttgcgacct tttgtgtcat
     8341 ttcttcccat ccaagcatgt cggaaaaatc ctgtggcagc ggatggtttt tcaaatcttc
     8401 ccatttcaat aaaccagttt tttctgtatg aaatttcaca tacaaatcag caagctgttg
     8461 cggaggaagc atcggtaatg caacaggtaa aaataacaac ccaatcaata aagggatgat
     8521 gacaaacata taccgaagcg cacggcgttt gaccgcagta tatttttcca gtgcatacga
     8581 tccaaacgcg agcaacgccg ggtacactcc caaagaataa taatttttac catgaccaat
     8641 cacaagaaga agtatgacga agagatatgc gaaacctaaa aaacggtact tgccttcttt
     8701 tgaaaagagt acatagaata agccggtcag ccagacgaat gcacaaggca ggatcaaaac
     8761 caattgatcc gtcaaaaagc tcacagggct tatatactgc aattgggttt cctgtaactc
     8821 cttcatatgg tgtatcacag ggaaactgtt tttatattgc cagaagaaat tcggaaggaa
     8881 gataagcaaa ccgataacgg ctgcatacca aaagtgtttg tttagaaaca cggttctgta
     8941 ttttgtcatc aacaagccga gcaatacgct agctgtgaag aatgctaccg aatatttgct
     9001 aagcatgcca ataccggcgc tgacgccgaa aagatacagc cattgattac tctttgtttg
     9061 tgtgaaacgc acaaggctga aagcgataag cgtccagaaa aaaatttcag gcgcattcgg
     9121 ttgaaacaaa aagaaaactc tgaggtaagc gctgaacatg aaagccagga acagaagcag
     9181 cagcgcaaaa tttctcccac caagcgaaac aacaatttta cctgcaagaa taaacgttgc
     9241 ggcaccgaac aatgacggcc acagcttcac ccaaaacata ccgccgccga ataagttggt
     9301 cagccacgcg aaaacggaaa gcaaaggcgg cacttccata aatccccacg cgaggtgatg
     9361 tccctcggcg aggtataaga attcatcccg gtgcggctca tacaccgggt tttgtaaaaa
     9421 atatggaatg acgaccttaa gcagtgcaag tatgtacagc agttggttgg ttttgcggaa
     9481 agaagttgtt ggaagaggca aatgttttcg ttttaaaata aaagcaattc tatttcaaca
     9541 tctccaaaac atgtttgatc cggtttagcg tttcatcttt tcccaatacc gctgcaacat
     9601 caaaaacacc cgggccatat tttccaccaa cgagcattat acgcaagggt agcaataact
     9661 cacccggttt catttgatga accgcggtca tttctttaaa tgttctctca agctcgtccc
     9721 gctgccaggt tgaaaaaagc tcgaaggccc ggataagttc aatgaagaat tgattttttt
     9781 gtgcgctcca tttcggctta acagaagata agttaatctc ttttaaggca acaaaaaaga
     9841 aagcgccttg ctcaacgaaa tcgggcagta acgtgcaacg atctttcacg agatccaata
     9901 ccttctcgaa tttttcatcg tcatcaatga aaatatgttg ttgttcgaat atttttctaa
     9961 tctccatcct gtaactcgag accggcaact ttctcatcca ttcatggttg aaccatttcg
    10021 ctttttcaaa atcgaatttt gcgccgcctt tgtgtaccct gtccatcgaa aatttttcaa
    10081 taagctcatc gatcgaaaat atctcctggt ccgttccgtc attccaaccc agtaacgcaa
    10141 gcatatttac aaaggcttcc ggtaaaaatc ctttttcacg gaagccgtgc gtgagctcct
    10201 tggttttagg atcagtccaa ttcattgcaa agaccggaaa acccaaacgg tctccgtctc
    10261 ttttacttaa tttcccgtga ccatccggtt taagtatgag aggaagatgt gcccattgag
    10321 gcattacgtc cagaccaaac aaatacttcc acaacaaaac atgtacaggt gaagatggaa
    10381 gccattcttc accgcgaaaa gcgtgcgtta tttgcatgag atagtcgtca accacaactg
    10441 caagatgata agtaggcatc ccatctgctt tcagcaaaac cttgtcatca acttgtgatg
    10501 aatcaaaatg cacatcgccg cggatcaaat ctgtaaagct gatcttttca ttttccggca
    10561 ttttaattcg gatcacgtgc ggcgtattgt tatcgagtaa tttttttatt tcatcattgg
    10621 aaagtgataa tgaattcttc atctccgtcc tgctcgcgtg gttgtactgg aaattcgcaa
    10681 tcgctttcct tttctcgtca agttcatttg gcgtatcaaa gccgtagtat gcgttgccct
    10741 gtacgacgag ctgttcagca tattgtttat aaatattctt gcgttcactt tgcctgtacg
    10801 gaccaaaaga gccgccatga aatgggcttt catcaggctc cagccggcac catttcaggc
    10861 att
//
LOCUS       DASQJI010000472         2160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1439025,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000472 DASQJI010000000
VERSION     DASQJI010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1439025"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1074..>2160
                     /locus_tag="VEV83_12995"
     CDS             1074..>2160
                     /locus_tag="VEV83_12995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYK46086.1"
                     /translation="MDFLEQLNIQKDNPGSSTGSKQFCTGEKINSYSPVDGNLIGSVS
                     STSTDTYNEVVRTAERAFYEWRLWPAPKRGEVVRQLSEALRKLKEPLGKLVSYEMGKS
                     LQEGMGEVQEMIDICDFAVGLSRQLYGLTMHSERPGHRMYEQWHPLGVVGIISAFNFP
                     VAVWSWNAAIAWVCGDVTVWKPSSKTPLCAVACQQIAAAVFAKNNVPEGVSCLVSGNA
                     CGDLMNADERIPLISFTGSTRIGKRVATAVAGRFGRTILELGGNNAIIVSENADMKMV
                     LTGAVFGAVGTAGQRCTTTRRLIIHESIYDKTIEVLRSAYAQLSIGDPLQATNHVGPL
                     IDTKAVDDYLNAIETAKSQGGKMVVEGG"
BASE COUNT          605 a          442 c          526 g          587 t
ORIGIN      
        1 ctcaactccg aaattgtttg gattgaaata gagcagctcg aggctgatct tgctgttcac
       61 caggccgacg ctatcgatct tgaaattctg cattcccctg tattcaaatg actgcggctt
      121 gttgcagctg gcggcgaaaa ccatcaacaa taaaatagtg cttaccggac gtatcatgtt
      181 tcgaaaaaat taaaagcatg gcagaaggca ttggaaactg caaaatcgca ttatggcaac
      241 cccgctttta ttgctcaaat attgacaaaa cagatgatag gaatttccta aagtttaaac
      301 cagatcgtag caaccgatgc ggatcggcgc aggtaacggt taatcacaag aaagcccctg
      361 tagaaacggg ggctacaatt gtagagatat atttcccacg aaaaaatcaa atatatacat
      421 taaatcaata gcgggcggct gttgtgcaga acttcctttt acggttcacc cgactgccgg
      481 cagatcacta atttttttcg gaaatttttg cagccacgaa cgacggcgta ctttttttga
      541 aaattacctg cctagaagtt ttagtaaatc gacttaagac cggtaaagat attaggctag
      601 taatattagt ttataatgtt tatacacaac tattggaaat atatctagtt atggcgaaat
      661 ttgaattttt aaattcatga tatatattgc ggcagtccgc gtcggacatc cgaaatgcat
      721 tacactacgt tttgttttca tggccgctgt gctttaaacg tcaatcagtt aattttcagc
      781 agataactat gtaaaactac tttttaagtt cataaaaaaa gaaattgaaa gattgttcta
      841 atgtgtcgtc gccggtcaag tcgtgttatg gcctcccctt tggcgcacgg taagcactta
      901 gcgcttaatt ttgcggccca tatgaattgt tcgatcaaag cacttctctc ctggctgtca
      961 tttttaagaa gctcgagcgc ccacattcct tgattcacga gattgcgttt atcggctaaa
     1021 taattcctaa ccgtgctgca tcacattttc aaaaaattaa aatttcaaag acgatggatt
     1081 ttttagaaca actcaacata cagaaggaca atccaggtag ctcgactggg agcaagcagt
     1141 tttgtacagg cgaaaagatc aattcctatt ccccggtcga cggaaatttg atcggcagtg
     1201 tttccagcac cagcactgat acttataatg aggtggtccg taccgccgaa cgagcgtttt
     1261 atgagtggcg cttatggccg gcaccgaaac gcggtgaggt tgtccggcag ttgtcggagg
     1321 cattacgtaa gctgaaagag ccgttgggaa aactggtaag ctacgagatg ggtaagagtt
     1381 tgcaggaagg gatgggagaa gtgcaggaga tgatcgatat ctgtgatttc gccgtgggct
     1441 taagccgcca gttatacggc ttgactatgc atagtgagag acccgggcat cggatgtatg
     1501 agcaatggca tccgctcggc gtggtcggta ttatttccgc ttttaatttt cccgtggccg
     1561 tgtggagttg gaacgcagcg atcgcctggg tttgcggaga tgtcaccgta tggaaaccgt
     1621 cgtctaaaac tcctttatgc gctgttgcct gtcaacaaat tgcagcagcg gtttttgcga
     1681 aaaacaatgt gcccgagggt gtaagctgtc ttgttagcgg aaatgcctgc ggagatttaa
     1741 tgaatgccga tgaaaggatt cctcttattt ctttcacggg ttctacgcgt attggaaaaa
     1801 gggttgctac tgcagttgcc gggcgatttg ggagaaccat tcttgaactt ggtggcaata
     1861 atgcgatcat tgtatctgaa aacgcagaca tgaagatggt gcttaccggg gcggtctttg
     1921 gtgctgtcgg aaccgctggt caacgttgca ctaccacacg ccgcctcatc attcatgaaa
     1981 gtatctacga caaaacgatc gaggtcttga gatcagcata tgcacaattg agtatcggag
     2041 atccgttaca agcaacgaat catgtggggc cgctcatcga tacaaaagca gtggacgatt
     2101 atttgaacgc gatcgagaca gcaaaatcgc agggcggaaa gatggttgtg gaaggaggca
//
LOCUS       DASQJI010000473         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2820131,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000473 DASQJI010000000
VERSION     DASQJI010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2820131"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..465
                     /gene="tsaE"
                     /locus_tag="VEV83_13000"
     CDS             55..465
                     /gene="tsaE"
                     /locus_tag="VEV83_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HYK46087.1"
                     /translation="METRYHIKQIKQIATQLWEEGRDKKIWAFHADMGGGKTTLIHAL
                     CDLLRVDDAVGSPTFAIINEYKSAVAGIIFHMDWYRIKDETEAVQAGCEDCIDSGNFC
                     FIEWPEKAPLLLPADTFNVFLSVINEHERRLTTA"
     gene            512..1726
                     /locus_tag="VEV83_13005"
     CDS             512..1726
                     /locus_tag="VEV83_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HYK46088.1"
                     /translation="MTGNKPHISAGFSFETQEETLDIKPSSARLTIGIPKETALQENR
                     VSLIPEAVSVLVNNGHEVVMETKAGEGSKYSDQDFSDAGAQIVQKKKDVFKSPVLIKS
                     APVMEDDIPFLQLNQTIISPINISMLKKGLVEKMMEKRITALGFENIKDDSGTFPIVR
                     SMSEIAGSAAMLIAGQFLGSVNNGKGVLLGGISGIPPTKVVIIGAGVVGEFATRTALA
                     MGASVKVFDNNVYRLKRLQNNLGMRVWTSVIEPRILSKQLKTCEVAVGALTNEGGRTP
                     IVATEEMVMAMRPGSVIIDVSIDRGGCFETSEISTHEHPTFTKHGVIHYCVPNIPSGF
                     ARTASHAISNVLMPLLLSAGDEGGLEEMVWHNFNLRHGVYLYKGHLTNFYISQRFDLK
                     FTDLNLLIASKR"
     gene            1780..>2002
                     /locus_tag="VEV83_13010"
     CDS             1780..>2002
                     /locus_tag="VEV83_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HYK46089.1"
                     /translation="MKRNFVSFFLLIVPVCLVAQSADSTYAQKLGYPKNAKVVILHVD
                     DVGMSFDSNEGAINALTKGVATSCSVMMPC"
BASE COUNT          563 a          443 c          493 g          503 t
ORIGIN      
        1 aaactaaaat aatgagctgg cggcaagcca cgtgtttttg catctgacta cacattggaa
       61 actcgttatc atatcaaaca aataaagcaa atagcaacgc agctttggga agaaggccgc
      121 gacaaaaaaa tctgggcatt tcacgcagat atgggaggag gaaagacgac gttgatacat
      181 gcgctatgcg atctgcttcg ggtggatgat gccgttggca gcccaacatt cgccatcatc
      241 aatgaataca aaagcgccgt tgcaggaatt atttttcata tggactggta ccggataaaa
      301 gatgaaacgg aggccgtgca agccgggtgc gaagattgca tcgatagtgg taatttttgt
      361 tttattgaat ggccagagaa agctccgctg cttttacctg cagacacgtt taatgtattt
      421 ctctctgtca tcaacgaaca tgaacgaaga ttaaccacag cttaaagcca gtaattcatt
      481 atttttatgg tgccaacatc aatcagcagg catgaccggc aataaaccgc acatcagcgc
      541 tggtttcagt tttgaaaccc aggaggaaac attggatatt aagccttcca gcgcaaggct
      601 caccataggt attccaaaag aaacggctct gcaggagaac cgggtttctc ttatacccga
      661 agcagtaagc gtactcgtga acaacggtca tgaggttgtt atggaaacga aagcgggtga
      721 aggcagtaaa tattccgacc aggacttcag cgatgcagga gcgcaaattg tacagaaaaa
      781 aaaggacgta tttaaatcgc ccgtgcttat caaaagtgca cctgtgatgg aagacgatat
      841 tccctttctt caactcaatc aaaccataat ttctcccatt aatatctcga tgcttaaaaa
      901 aggccttgta gaaaaaatga tggagaagcg catcacggcc ctgggttttg aaaacataaa
      961 agacgacagc ggtacttttc cgattgtgcg aagtatgagc gagatcgcgg ggagcgctgc
     1021 catgctgatc gcagggcagt ttctcggcag cgttaataac ggcaaaggtg ttctcctcgg
     1081 cggtatcagc ggtataccac ctacaaaagt tgtcattatt ggcgccggcg tcgttggtga
     1141 atttgccacg cgtactgccc ttgccatggg cgcttccgta aaagtgtttg acaacaatgt
     1201 ctataggctg aaacgtttgc agaataattt gggcatgcgt gtatggacga gtgttattga
     1261 gccgaggatc ctttcaaaac aattaaagac ctgcgaggtt gcggtaggcg ccttgacgaa
     1321 tgaaggcggc cgcactccca ttgttgcaac agaagagatg gtaatggcta tgcgcccggg
     1381 cagtgtgatc atcgatgtga gtattgacag aggtggctgt ttcgaaacga gtgagatcag
     1441 tactcatgag cacccgacct ttaccaagca tggagtgatc cactattgcg tacccaacat
     1501 tcccagcggt tttgcacgca cggcgagcca cgcgatcagc aatgtgctaa tgcccttgct
     1561 gctttccgcc ggtgatgagg gcggccttga agaaatggtt tggcataatt tcaatttgcg
     1621 ccatggcgtg tatttatata aaggccatct taccaatttt tatatcagcc agcgctttga
     1681 cctgaaattc accgatctca acttactgat agcaagtaaa cgatgagtct gagacacctc
     1741 tgccatcttt cttatcttac tgctcataaa tcccaaccag tgaagagaaa tttcgtttcg
     1801 ttttttctat tgatcgttcc ggtttgtctt gttgctcaaa gcgccgacag tacgtacgcg
     1861 caaaaattgg gctatcctaa aaacgcgaag gttgtgatac tgcatgtcga cgacgtgggc
     1921 atgagtttcg attcaaatga aggcgccatc aatgccctca caaaaggagt ggcgacgtcg
     1981 tgcagcgtga tgatgccttg cc
//
LOCUS       DASQJI010000474         5110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1899290,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000474 DASQJI010000000
VERSION     DASQJI010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1899290"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VEV83_13015"
     CDS             complement(<1..339)
                     /locus_tag="VEV83_13015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46090.1"
                     /translation="MGNRVIINNSLPKGTTYTAPNGKKYFKVIFWSRIINETDNPLEM
                     NVNFPVELYEVPGSSGNYYKILVPPDTMTVDKETMYDYGMTGLKSFLDNSINKPSSIK
                     RIINPKESTGF"
     gene            1356..2654
                     /locus_tag="VEV83_13020"
     CDS             1356..2654
                     /locus_tag="VEV83_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46091.1"
                     /translation="MDPLMRYLYSILTALAVLSASCKKNVETIYEEEGDPFVAEIKVD
                     KIVNDSTLVLKWNKYPGTGFHSYKLWRTADISQLPQELATFNNPDSTSYTDLAVPSNP
                     IVEYKLEVATDSSYYYSAVDYKSQDFFYGNLVDVLINKDAHLLYLFSGIDKKIAVYNY
                     TNNQKLFEKTYDVAFGYCALGNFAGINDELYVPRSDGWLDILNASNLDLKSRIYVSGT
                     NIGSVIAHQGKLYVSSTDLSVPYGLNDNAIKVYDRATSNLIARTGIHSNTKLLFLEST
                     NLELAELTLNLIPVDLCYYSFDANGQPLVSKADSYHGDYLLDPGVFRSFPDGEHFITS
                     TEGNIFDKTLVYQKSLGPNYSNSFADFAFSDDGTVIYAADALSKRVEAISYPQLQQVQ
                     TYTTGFYPVKLFKAGEEIICVSVVTQYSVFAYFTIEKIKL"
     gene            2654..4129
                     /locus_tag="VEV83_13025"
     CDS             2654..4129
                     /locus_tag="VEV83_13025"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK46092.1"
                     /translation="MKPVYCSIIIAILFSCTKTETKIITIKKPTASFEVRVNNPTFPY
                     HPNVGYIDSFFSFINTSDTASDITYKWDFGDGNASDEINPKHQYHKRGIYRITLTVNK
                     NDQYIDTSSQTVKVILGQQAISLGKDKSAFPFDVIETADHGFIIAGSYYNSVTYSNDE
                     WFFLKTDSLLHQTDLIIFPNSVRFSSAKKTNDGNYILCGTTTGSNRYNELIKVDAGGN
                     IIWNKVFPANFYIRDAEQCADNSYAFVASTPTTLQGYYEVNVIGKVDGSGNELWTKTL
                     DSDIIMTTAANLSIDNNDMVLAGVKRYKDGSQSYYCEYCDSVIIAKYSLNGQLVWNNR
                     ILWGLNTNNYFDTRIAKHPDDTYSVINQQINGLYLFDHLGNFTDRKLLEGQRLAYNTT
                     TSDDNILILETEYSNGFHMHISKFSTAGAAFWQTGVDGTQYLDPNTEICCSDTQGTTA
                     TSLSVGGNLVIGTRFDYVSSDLLKKQQNILLVELDEDGSVK"
     gene            4760..4894
                     /locus_tag="VEV83_13030"
     CDS             4760..4894
                     /locus_tag="VEV83_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46093.1"
                     /translation="MYEVIKRTKQWKRTLTNKGILIAGYLYAKTAKNEVMISEHPEPY
                     "
BASE COUNT         1517 a         1000 c         1011 g         1582 t
ORIGIN      
        1 aaaaccagtc gattcttttg ggttaataat tctttttata gatgatggct tgttgatact
       61 attatctaaa aaagatttta aacccgtcat gccataatca tacatcgttt ctttgtcaac
      121 cgtcatagta tcgggtggaa ccaatatttt atagtaatta ccagatgatc ccggaacctc
      181 atataattct acaggaaagt taacgttcat ttctagcgga ttgtcggttt cattgattat
      241 tctagaccaa aatataactt taaaatattt cttcccatta ggtgcagtat atgttgtgcc
      301 ttttggtaag ctgttgttta ttattacacg gttacccata gtgtcggcat actcataatg
      361 ccttacaggg gttttctata tcaacagtat ctggttttga tttacaggct tgtccacagg
      421 aaaataatcc cgttgtggcc atagtcaata atagtatgtt tgttttcatt ttggcctatt
      481 aagcttgcgt acaatgaaaa agtatgtggg atggtaggac attcattgaa cgtcctgccc
      541 aaacaaatgc tctattgaaa atatttttgt tgaacataac atttgaagct taattattca
      601 ggtcaggcca taactgaagt gcgtaaattg ccgccgattg ctcgtgattc aagtcttgtt
      661 ttttcaaaat actttttatg aagattcttc gaaggagggc aataaactta cgtttattga
      721 atatttccgg cgtttcactt ttttcccagt aagcagttat atccctgaaa acctctttca
      781 tgccatccat tgatgtccct tttataaaga aaccgtgaga cggcaggtcg tacgtttttc
      841 ttacctgtgt ttcggtcgca ccggctgacg aaaaagataa atggaatgct ttaagataaa
      901 tggaatgctt ttgtacttag ctgatgagtc cttcagtatt ttttcccgca acttaaagcc
      961 atttattcaa ggacgattta cttcaatgat gatgaatgga gttgcttgcc ggattttaaa
     1021 tactcaagta atgcctcacc gcttttaaag aatataaggg gtgaatttag attcagctcc
     1081 tcagctattt cttttgcaat agcatgatcg tcgtcatcct cgtctatgcg catttagata
     1141 agctatcaat tggatccaaa accctttgta ctcttttcga ggctacagtt ttgaatctct
     1201 gcttttagca agcggcaata atgattgttc cattatctgc tttagcttac tgcccgttac
     1261 acgtgttgcc cttgataaat ttcttattga acagcctttt gcggtgaatg atcgttttgg
     1321 tttgcttcat ctcaaatcgt taaaagattc ttatcttgga cccacttatg agatatttgt
     1381 attcaatcct gaccgcactt gctgttttgt cggcttcatg caaaaaaaat gttgaaacta
     1441 tatacgagga agagggtgat ccttttgttg ctgagataaa agttgacaag atcgtaaacg
     1501 attcaacact ggtactgaaa tggaataaat atccagggac cggatttcat tcatataaac
     1561 tttggagaac tgctgacatc tctcagttac ctcaagaact tgccacgttc aacaacccgg
     1621 attcaactag ttatacagac ctggccgtgc catccaaccc tattgttgaa tacaagttgg
     1681 aagttgcaac agacagttca tactactata gtgcggtcga ctacaaaagc caggacttct
     1741 tttatgggaa tcttgtagac gttttgataa ataaagacgc acacttactt tatttatttt
     1801 caggcattga taagaagatc gccgtttata attatacaaa caaccagaag ttatttgaaa
     1861 aaacatatga cgttgcgttt ggctattgtg cgctgggaaa ttttgccggc atcaatgacg
     1921 aattatatgt accaagaagc gatggatggc tggacatatt gaacgcatca aatcttgact
     1981 tgaaatcgcg gatttatgtg tcgggaacaa acataggatc tgtaattgct catcaaggta
     2041 agttatatgt ttcttcaacc gatctctctg ttccatatgg tttgaacgat aacgcgataa
     2101 aagtctatga cagagcaacg agcaacctca ttgcgcgaac gggcattcac agcaatacaa
     2161 agcttttatt tttggaaagc acgaatttgg agcttgcaga actaacgctt aatcttattc
     2221 ctgtagatct ttgttactat agttttgacg ctaacggtca gccgctggta tctaaagcgg
     2281 attcgtacca tggagattat ttacttgacc caggcgtatt tcgttcgttc cctgacggag
     2341 agcatttcat cacctccact gagggtaaca tctttgacaa aacgctggtt tatcaaaaaa
     2401 gtttaggtcc taattacagc aatagctttg ctgacttcgc cttcagcgac gatggcaccg
     2461 ttatttacgc tgccgacgct ctttccaaac gggttgaagc gataagttat ccgcaactgc
     2521 aacaggtgca aacgtataca acaggatttt acccagtgaa gctgtttaag gcgggcgaag
     2581 aaattatctg tgtttctgtg gtgacccagt attcggtgtt tgcttatttc acgattgaaa
     2641 agattaaact ttgatgaaac cagtttattg ttcgataatc atagctattt tgttttcatg
     2701 cacgaagacg gaaaccaaaa tcataacaat aaaaaaaccg acagcgtcat ttgaggttag
     2761 ggtaaacaac ccaacttttc cttaccaccc taacgttggt tacatagatt cttttttctc
     2821 ttttataaat acatccgaca ccgcttcgga tataacctac aagtgggatt tcggggacgg
     2881 aaatgcatca gatgaaataa atccaaagca tcaatatcat aagcggggaa tatacaggat
     2941 aacgcttact gtcaacaaaa acgatcagta tatcgatacg tcgtctcaaa ccgtaaaagt
     3001 aatattgggg cagcaggcga tttctttagg caaggataaa agtgcatttc cgtttgatgt
     3061 aattgaaaca gctgaccacg gctttatcat agcaggttct tattataata gcgtaacata
     3121 tagcaacgat gagtggtttt ttttgaagac ggacagctta ttgcatcaaa ccgacttaat
     3181 tatatttccg aattctgttc gattcagttc tgccaaaaaa acgaatgatg gaaattatat
     3241 tctctgcgga acgacaacag gcagcaatcg ttacaatgag ttgattaaag tggatgccgg
     3301 cgggaacata atttggaata aagttttccc ggcgaacttt tacattagag atgcagaaca
     3361 atgtgccgac aacagctacg cttttgtggc cagcacacca acgacactgc aaggatatta
     3421 cgaagtaaat gtaatcggta aggtagacgg atcaggcaat gaactttgga cgaaaacact
     3481 tgacagcgat attatcatga ccactgctgc aaatctctcg atcgataaca acgacatggt
     3541 gcttgccggt gtaaaaagat ataaggatgg ctctcaaagt tattactgcg agtattgcga
     3601 ttcagtaatc atagcaaagt acagtttgaa tggacaactt gtttggaaca accgtatact
     3661 ctggggtttg aatacaaaca actatttcga tacgagaatt gcgaagcatc ctgatgatac
     3721 ctacagcgtc ataaaccagc aaataaatgg gctttacctc tttgaccacc tcggtaattt
     3781 tactgacaga aagcttctcg aaggtcaacg gttagcttat aatacgacaa cgtccgacga
     3841 caacatactc attctggaaa ctgaatacag caacggtttt catatgcaca tttctaaatt
     3901 ttcaaccgca ggagcggcgt tctggcaaac cggggttgac ggtacacagt acctggaccc
     3961 gaatactgaa atttgttgtt cggatactca gggtacgacg gctacttctc tttcggttgg
     4021 tggcaatttg gtcataggca caagattcga ctatgtttcg tcagatctgc tcaaaaaaca
     4081 gcaaaacatt ctactggttg aacttgatga agacggttcc gtaaagtagg ccggccagct
     4141 tacctcgctg aatttttcgt tggctgctct cctcgatccc cggtgacctc gctttgcttt
     4201 tgttttcgca tgttgctttc caactttacc taaaagatct tcccacatca tcactttcat
     4261 tagtctgccc tttttcatta cgtcttacat atcgtttatc tccatgcgga gcgatttttg
     4321 cgcgtttggc cgcttttatt aaatgcgctt ttagcggatt tatgatgatt tcggaagccc
     4381 ttctattaaa aaaagataga aataaagatg gattcggcgt ttattatctt caatatcttt
     4441 tttataacag actagaattt ttgctctgcg aagaaactaa cgcctgaaga tggttttttg
     4501 ctctctgtga tgatattaaa gacggtgcac tggtccaaaa tatcaggcgt ccggatgctg
     4561 ttgtaccatc tattattgtt ttccatttta gaagccatta atcttgcaaa agaagaaatc
     4621 ctcattacaa cgctttatta tttaatggac ctttttatta caacgggaca tttcaaaaaa
     4681 gcgacacaac tgttttcttt aatctcaaac aattgtttgt gactattgtg cagttcgaga
     4741 aagaagaaaa cctgacggta tgtatgaagt tataaagaga actaaacaat ggaaacgtac
     4801 tttgacaaac aaagggattt taattgctgg ttatttatat gccaagacag caaaaaatga
     4861 agtgatgata agcgaacacc cagaaccata ttaaaatcac aattacaaaa agcagtagat
     4921 acaacagcgg tatttgccac agcagggcgg gacggtagac caatcatccg acaaatcttt
     4981 actcagcaac agttctggct tgacgttgat aattaagctg caaatgttgc aataagcagg
     5041 gctacacgga agcggggtcg gcgtgggatc tcgttctgct tcgttctgtg cttacagaac
     5101 tttataagaa
//
LOCUS       DASQJI010000475         6563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2820287,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000475 DASQJI010000000
VERSION     DASQJI010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6563
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2820287"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VEV83_13035"
     CDS             <1..639
                     /locus_tag="VEV83_13035"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK46094.1"
                     /translation="ELKAKDDFFSKRAMHYDKRFHKKGLDKTQQLLLEGITAVINNGK
                     MSASTVMEIGCGVGGLLLTMLGKGVDYAIGVDASEGMLEKARQNAAERNFKDKTLFLH
                     GDFVNVEPELQPADIVVLDKVLCCDSDPESLIKKSTGKTKYIYALSFPRDHIFARFFI
                     KAGIAITKIFPVKFTPFYHEPNDIKRWTEGANFILSYARNTFFWQVQVYNHK"
     gene            complement(740..1183)
                     /locus_tag="VEV83_13040"
     CDS             complement(740..1183)
                     /locus_tag="VEV83_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46095.1"
                     /translation="MKKIIVAASLMIALSASAFAKNANVNTDLLKDLSSTFKKTREVC
                     WIDKQQYNEAMFKFNNQTACALYTRDNNELIGFGILLEKSELPGVVTDAIKDNYSTWE
                     FVDAMMFVDTNGNVNYFMQVKNNSKVRALKITPGGDVSVYARNSF"
     gene            1652..2815
                     /locus_tag="VEV83_13045"
     CDS             1652..2815
                     /locus_tag="VEV83_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HYK46096.1"
                     /translation="MGVLLISCSKTNDTSTPAAPKPEITGFTPASGRIGSDVSINGSH
                     FGNEVSKASVKFNGIVATINTIADNKITTTVPTGATTGKISVTVSGVTVSSTTNFEVL
                     TDSWTQKAPLDIERSKALGFSILDKGYMVTGYAYSSGWLSDLWQYDPSTDKWTKKADL
                     PASGREWATGFTINNKFYMGTGFHLGELKDFWEYDPASDMWTRKTDFPGNARENAFGF
                     SINGKGYLGGGTDLDYLTNYNDFWEYDPATDQWTQKTAFPGTARFEASGFSLNNKGYV
                     ALGGAGFIGYTKEVWQYDPGSDQWNRKSDFPGVLRSGQAEFVIGNKGYIACGDDGSKT
                     LNETWEYDPDTDAWERKVDFEGDVRTEPFSFSLSGKGYVGCGDYEKDFWQYNP"
     gene            complement(2907..3941)
                     /locus_tag="VEV83_13050"
     CDS             complement(2907..3941)
                     /locus_tag="VEV83_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK46097.1"
                     /translation="MKKIKFAVVGCGHIGKRHAKLVAENPNAELTALVDIKDPKQVAP
                     EAFSVPFYSSLDEFLQLDADTDVVNIATPNGLHAEQAIACLKNGKHVVIEKPMALHKA
                     DAEDIIHTALQQHKHVFVVMQNRYSPPAKWIKALVDSGKLGKIFFVQLNCFWNRDERY
                     YLRSEKTWHGTKGMDGGTLFTQFSHFIDIFYWLFGDIKNIQTTLRSFNHKQLTEFEDS
                     GISTFEFGKDSIGCLNFSTSVWDTNMESSITIVAENGSIKIGGQYMNKIEYCHIKDYV
                     APQLEPVQSNDYGTYKGSAANHEFVIQNVVDVLNHNAPITTNAMEGLKVVDMIERIYK
                     SAAGISIVNH"
     gene            complement(4087..4665)
                     /locus_tag="VEV83_13055"
     CDS             complement(4087..4665)
                     /locus_tag="VEV83_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HYK46098.1"
                     /translation="MGDDFFVHPTAIVEEDVTIGNGTSIWHFSHLMKGCRLGTNCNVG
                     QNVFIASGVVLGNNVKVQNNVSLYTGVTCDDDVFLGPSCVFTNVVNPRSTVVRRDKYV
                     PTHVGKGATIGANATIICGNNIGSFAFIGAGAVVTKNVLPYALVVGNPARQTGWMSER
                     GHKLQFNDEGIAVCPEGGEKYIFKDDCVTRLT"
     gene            4937..5941
                     /locus_tag="VEV83_13060"
     CDS             4937..5941
                     /locus_tag="VEV83_13060"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK46099.1"
                     /translation="MKKPLISVIVPVLNEAAYIDAMVCSLLKQKQENISMELLLVDGG
                     STDGTLEKLNALTPQYPFINIIHNERHITPVAFNKGLAAAKGDYIAILGAHSKYDEDY
                     LQTCIAEMQQRDVDGCSGRVVIAGSDAKGEAALVYCLLTSSFGVSSKSYRTASEGISE
                     QCPYPVFKRCVFDKVGFYNEHLPRNQDNDMNYRIRKAGYKLYYSFKTNACYYHPQTIS
                     GLLKYALRTGKGNAMSLKISPASMSLRHVIPMLFTTFLLVLICCLLCGLLLPGNIGLD
                     VAVVLISCIAIHLLCGVIQSLRFYRQLGAKDIWKLPGLFLVFHFVYGWGMLVGLMTNE
                     "
     gene            complement(6008..>6563)
                     /locus_tag="VEV83_13065"
     CDS             complement(6008..>6563)
                     /locus_tag="VEV83_13065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HYK46100.1"
                     /translation="SARDSKVANAFGLGVEWLNEKISPVFDKAVDQSMHKLTVEPESD
                     EIVTLPFKTTNFRERPDLEAKMLDLVNNERRKVGLQPLQPDPELRKVAVAHSADMFQR
                     GYFAHLTPEGKDPFDRMRDAHVRFTLAGENLALAQTLPIAHEALMNSPGHRENILRTG
                     FGRVGIGILDGGFYGIMISQEFRN"
BASE COUNT         1757 a         1435 c         1493 g         1878 t
ORIGIN      
        1 gaactaaaag caaaagacga ttttttttcg aaacgcgcaa tgcattatga taaacgtttt
       61 cataaaaaag gactcgacaa gacgcagcaa cttttattgg aaggcatcac tgctgttata
      121 aataatggaa agatgtcagc cagcaccgtg atggagatcg ggtgcggcgt cggtggtttg
      181 cttctcacga tgcttggcaa aggggtggac tacgctatcg gtgttgacgc ttcggaaggg
      241 atgttggaaa aagcaagaca gaatgccgct gaaaggaact tcaaagacaa aactcttttc
      301 cttcatggcg acttcgttaa tgtggaaccc gaattacagc ctgcagacat cgtggtcctt
      361 gataaagtgc tttgttgtga ttcggacccg gaaagtctga taaaaaagtc aacaggtaaa
      421 acaaaataca tttacgcctt atcgtttccc cgcgatcata tttttgcccg cttttttata
      481 aaagcgggaa ttgcgatcac aaaaatattt ccggtaaagt ttacgccttt ttatcatgag
      541 ccaaacgata taaaacgttg gaccgaaggc gccaacttta ttttgtcgta tgcccgcaac
      601 acttttttct ggcaggtgca ggtatataat cataagtaat tcggcgcatt taaactcctg
      661 cggcctggca tcgcaaagcg gcatggaagt aaagttcggg gcgccttact cccatgccga
      721 ccgcttcatt aattccagat caaaaactat ttcttgcgta cacgcttaca tcgccaccgg
      781 gtgtgatctt cagtgcacga accttgctgt tgtttttaac ctgcatgaag taattcacat
      841 tgccattcgt gtcaacaaac atcattgcat caacaaattc ccaggttgaa taattatctt
      901 ttattgcgtc ggtcacaacg ccgggcaatt cacttttttc aagcaggata ccaaacccga
      961 tcaattcatt attgtcgcgc gtgtacaaag cgcaggcagt ttggttgttg aatttgaaca
     1021 tggcctcatt gtactgttgt ttgtctatcc agcacacttc cctggttttt ttgaaagttg
     1081 atgaaagatc ttttagcaag tcggtgttaa cgtttgcgtt tttcgcgaaa gcggaggcgc
     1141 ttaaggcaat cattagtgat gcggcgacaa ttattttttt cattttgtaa atttttttcc
     1201 agttatggag tgaagaaata ttgcttgttt gctttatttc aaaagccgtg agcagttgcg
     1261 ttaagatgtg ttaaacgggt gacgagtggc gaagaagact gagtaactgg cattaataaa
     1321 tgattaggct attgcagagt ttttttatga tgttgaagcg tgaatgaaac tgtccggttt
     1381 tgaacaacca gatgtatcag ttttgataca atgtggttgt aatcgatgtt agctattgga
     1441 ttgaacgttt tgtcctgaac tgcaagctca gacttcgaat agaagttcgg caggatcaat
     1501 agggtacaga gatgtaaaca ttttggataa gtgtcagacc gtcttcataa tttagcttgc
     1561 ttcttaacca aaaaaaataa accaacaaac taaacagctt tatctaatcc ctaattcaat
     1621 tcatatgcag aagtttctcc tatttctctg tatgggggtt ttattaatct cctgcagtaa
     1681 aacaaacgat acatccacgc cggctgcacc taagccagag attaccggtt ttacccctgc
     1741 atccgggaga ataggatccg atgttagcat aaatggtagc cactttggca acgaggtatc
     1801 caaagcatct gtgaaattta acggcattgt tgctaccatc aataccatcg ccgataataa
     1861 gatcacaacc actgtcccta cgggtgcaac caccggaaag atcagtgtaa ctgtaagcgg
     1921 agtaaccgtt agctcgacga ccaactttga agttcttacc gacagctgga cgcaaaaagc
     1981 accgcttgac atagaacgat cgaaagcgtt aggcttttcc atattggata aggggtacat
     2041 ggtgactggc tacgcataca gttcaggttg gttgagtgat ctttggcaat atgatccttc
     2101 gactgacaaa tggacaaaaa aggcggactt gcccgcctcg ggccgtgaat gggccaccgg
     2161 gtttacaata aacaacaaat tttacatggg gaccgggttt cacctcggtg agttgaaaga
     2221 tttttgggaa tatgatccgg cttcggatat gtggacaagg aaaactgact ttccgggtaa
     2281 tgcacgcgaa aatgcatttg gcttttcgat aaatggtaaa ggatacctgg gcggcggaac
     2341 tgatttggat tatttaacca attacaatga cttttgggag tacgatcctg caacagatca
     2401 atggacgcaa aaaaccgctt tcccgggaac ggccaggttt gaggcttcag ggttctcttt
     2461 gaacaataag ggatatgtgg cgcttggcgg cgcggggttc atagggtata caaaagaggt
     2521 ttggcaatac gacccaggct cggatcaatg gaatcgaaaa tctgattttc cgggagtcct
     2581 gcggagcggc caggcggagt ttgttattgg caacaaggga tatattgctt gcggagatga
     2641 cggttccaaa actttgaatg aaacctggga atacgatccg gacacagatg catgggaacg
     2701 gaaagtagac ttcgaaggcg acgtaagaac agagccgttc agctttagtc tgtcaggcaa
     2761 gggttatgtg ggctgtggtg attatgaaaa agatttttgg caatacaatc cttgaaccaa
     2821 ctggagaaac cgttttgagg tgcgtaagag tttcggccat ttggtctttt acatgagacc
     2881 tgtgttgtgg ttcaaacaaa cgctctttag tggttaacga ttgatatgcc tgcagcgctt
     2941 ttgtagatcc tctcgatcat gtctaccacc ttcaatcctt ccatcgcatt cgtggtaatc
     3001 ggtgcattgt gattgagcac atcgaccacg ttctgtatta caaattcatg attcgcagca
     3061 gaacctttat aggttccgta atcgttggac tgaaccggtt ccaattgcgg cgctacataa
     3121 tcttttatgt ggcaatattc aattttgttc atgtactgcc cgccaatttt tatgctgccg
     3181 ttttcggcga cgatcgtgat actgctctcc atattcgtgt cccaaacaga agttgaaaaa
     3241 ttcagacagc caatgctgtc ttttccaaat tcaaatgtgg aaatgccgct gtcttcaaat
     3301 tctgtaagtt gtttatgatt gaaggatcgg agagtagtct gaatattttt tatatcacca
     3361 aatagccagt aaaaaatatc aatgaagtgt gagaactgcg tgaacagggt gccgccatcc
     3421 attccttttg ttccatgcca cgttttttct gagcggaggt aataacgttc gtcccggttc
     3481 cagaagcaat tcaattgaac gaaaaagatt tttcccaatt tgccgctgtc gaccagcgcc
     3541 tttatccatt tggccggagg agaataccgg ttctgcatga ccacgaagac atgtttgtgc
     3601 tgttgaagcg cagtatgaat gatgtcctct gcatccgctt tgtgcagcgc catcggtttt
     3661 tctatcacca catgctttcc attttttaga cacgcaatgg cttgttcagc atgcagcccg
     3721 ttcggtgttg caatattcac aacgtccgtg tcagcatcca actgtaagaa ttcatccaat
     3781 gaagaataaa acggaacaga aaatgcttcg ggagcaacct gttttggatc tttgatgtcc
     3841 acaagggcag ttagttcggc atttggattt tcagccacca gcttcgcatg ccgtttacca
     3901 atgtgcccgc aaccaactac tgcaaatttt attttcttca tgcaggtatt taaaatcttg
     3961 tccgattgca tcagaaaccg attttctcgt gctggctctc tgcccttcaa ttttgcggtt
     4021 cagaaatttt tgaacccgct aaagcgcgaa gatagagatg cgcgaagctg agttccgtga
     4081 atgctttcac gtaagtctcg tcacacaatc gtctttaaaa atatatttct ctcctccttc
     4141 cggacacacc gcaatgcctt catcattaaa ctgaagttta tgaccacgtt cgctcatcca
     4201 gccggtttgc ctggccgggt tacctaccac gagcgcatag ggcaacacgt tctttgtaac
     4261 taccgcacca gcaccaataa aagcgaatga cccgatgtta tttccgcaaa tgatcgttgc
     4321 gttcgcgccg atcgttgctc ccttgccaac atgtgtggga acatatttat ccctgcgcac
     4381 aacggtactc cttggattta cgacgttggt aaaaacgcac gatggtccga ggaaaacatc
     4441 atcatcacac gttacgcctg tatacaaaga aacattgttc tgcaccttca cattgtttcc
     4501 gagcactacg ccggatgcaa taaacacgtt ctggccaaca ttgcaattcg taccgagtct
     4561 gcagcctttc atcaaatgag aaaaatgcca gatgctggta ccgtttccga tcgtaacgtc
     4621 ttcttcaaca attgcagtcg gatgaacaaa aaagtcatca cccattgcct ggtttttaaa
     4681 actctgcaat agtattacta ttttttggag tgatgtgcga aatgaaaatt cgctgctacc
     4741 gattggattt tccgtttaca gatgcggagc tgaggctgag cacgcatgta gcaaatgcag
     4801 aaagttccgt gccttgtaag gcctgtgttc tcatgtgctt cgcattagcg cgctattaaa
     4861 tactgaaaag gcttcagtga gttacaaaaa ttttttttat gttcgggcta tgttttcgtt
     4921 ctgaccggca actgttatga aaaaaccatt gatcagcgtt atcgtccccg ttttaaacga
     4981 agccgcttac atcgacgcga tggtctgttc tttgctcaaa caaaaacagg aaaatatcag
     5041 catggaactt ttgctggtcg acggtggttc aaccgatggc acgctggaaa aattgaacgc
     5101 tctcacaccg caatatcctt tcatcaatat catccataac gagcgtcaca ttacgccggt
     5161 ggcttttaac aaaggcctgg ctgctgcaaa aggagattat atcgcgatcc ttggtgcaca
     5221 ttcaaagtat gacgaagatt atctgcaaac gtgcattgca gaaatgcagc aacgcgacgt
     5281 tgacggatgc agcggtcggg ttgtcatcgc cggcagtgat gccaaaggag aagcagcgct
     5341 tgtctactgt ttactcacga gcagttttgg agtgagcagc aaatcgtaca ggacagcaag
     5401 cgaaggcata agcgagcaat gtccttaccc tgtttttaaa agatgtgtct ttgataaggt
     5461 cggcttttat aatgagcatc ttccgcgcaa ccaggacaat gatatgaact accggatccg
     5521 caaagcaggg tataaattgt actacagctt taagacgaat gcgtgctatt atcatccgca
     5581 aacgatatcg ggtcttttaa aatatgcatt gcgaacggga aaaggtaacg cgatgagttt
     5641 aaaaataagt ccggcttcaa tgtcgttgcg ccatgtgata ccgatgctgt ttacgacttt
     5701 cttgctggtt cttatctgtt gcttactatg cggcttattg cttcccggaa atatcgggtt
     5761 agacgttgcc gttgtattga taagctgcat tgccatccac ctgctttgcg gagtcattca
     5821 atcgcttcga ttttaccggc aactcggtgc gaaagatatt tggaaattgc caggtctctt
     5881 cctcgttttt cattttgtgt atggatgggg gatgttggtg ggattgatga cgaatgagtg
     5941 atgaatgatg agtgaggttt aaaacgcgct gatctttact cattactcat tactgattat
     6001 tcatccctca gttcctgaat tcctgcgaga tcataattcc ataaaatccg ccgtcgagga
     6061 taccgatgcc aacgcggcca aaacctgtcc tcagtatgtt ctcgcggtga cccggcgaat
     6121 tcattaatgc ctcatgcgct atcggaaggg tttgcgcgag cgccagattt tctccggcca
     6181 gtgtaaagcg tacgtgcgca tcacgcatgc gatcaaaagg gtcttttccc tccggtgtta
     6241 aatgggcgaa ataacctctt tgaaacatat cggccgaatg tgcgactgca acttttcgaa
     6301 gttccgggtc tggctgtaac ggctgcagtc caacttttcg ccgctcatta tttacaagat
     6361 cgagcatctt tgcttcaagg tcgggccgtt ctcggaaatt cgttgttttg aacggaagcg
     6421 tcacaatttc atcactctcc ggttcaacgg tcagtttgtg catgctttga tctaccgctt
     6481 tatcaaaaac aggcgagatc ttttcattca gccattcaac gcccaatcca aacgcattcg
     6541 caactttact gtcgcgcgca gat
//
LOCUS       DASQJI010000476         3781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_56121,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000476 DASQJI010000000
VERSION     DASQJI010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56121"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VEV83_13070"
     CDS             complement(<1..257)
                     /locus_tag="VEV83_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HYK46101.1"
                     /translation="MIRTVAVVGAGTMGNGIAHVFAQNNFEVNLLDVNAEQIGKALQT
                     IAKNLDRQISKGAVTEEQKKEALSNISTFTDLQEGVQDADLV"
     gene            complement(349..1125)
                     /locus_tag="VEV83_13075"
     CDS             complement(349..1125)
                     /locus_tag="VEV83_13075"
                     /inference="COORDINATES: protein motif:HMM:NF045274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46102.1"
                     /translation="MNMLRAFSKQFPAFFVLLALASNVHAQDNNALLKEAKNLELKFD
                     EPGALEKYKQIAAADPSSIFALVKCAELSCSIGERQKDKKQKAAYFQNANDYANRAYQ
                     QSSSNADACYAMALVAGKMTEVEDDNKRTIDDVKNIKIYADKALAVDANHAKANYVLG
                     KWHFELIRLSWLKRAAVKAFYGGIPDTQIDSAAFYMEKSRSIDPYFALAYLDLAKVYQ
                     YDHQPGKAIDVLNKLVKLPNRVYDDAAIKEEGKQLLQTMQ"
     gene            complement(1138..1509)
                     /locus_tag="VEV83_13080"
     CDS             complement(1138..1509)
                     /locus_tag="VEV83_13080"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HYK46103.1"
                     /translation="MLKIELSRLLFHAFHGVHEEESRTGGDFEVDLSVYFEPRTIPIR
                     HMDETIDYTLLYQLVKQRMEQPTPLLETLATEIAQEILSTYAKAEEVCVKIKKLNPPI
                     PFFNGNVSAECTLKRGGKRMH"
     gene            1636..3351
                     /gene="ggt"
                     /locus_tag="VEV83_13085"
     CDS             1636..3351
                     /gene="ggt"
                     /locus_tag="VEV83_13085"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HYK46104.1"
                     /translation="MKRFFFTVTAFASVLVSCGQERIVGPGKDVDPYHFISVKTLTCT
                     HACVASAHPLASEVGLAIMKRGGNAFDAMIATQLTLAVVHPAAGNLGGGGFMLARKTD
                     GSLLALDYREMAPAKASRDMYLDPAGNAITDLSQNGHLSSGVPGTVAGLFAEAKYGKL
                     PFKELIQPAIDLAEKGFVLTKGEANGLNYNKSDFIKYSTKATAYVKEQDWKEGDTIFQ
                     PELAKTLMRLRDNGLKGFYEGETAKLIVDEMQRGHGLVTYDDLKNYSVKARNAIEFDY
                     RGYHVVSFPPPSSGGILIGQMLKMIEPYPMHDYGFQTARSVQVMIEAERRAFADRAEH
                     MGDPDYWKVPQQTLLSDAYLKQRMNNYDSTKAGKSADITAGIIHESDQTTHISIIDGD
                     GNMVAVTTTLNNSYGSKTVVGDAGFLMNDEMDDFSVKPGVPNMYGAIGGDANAIAPGK
                     RMLSSMTPTLVLKDNKPFIVVGTPGGTTIPTSVFQSIVNIIDFDMSASDAVDKPKFHH
                     QWLPDTVYIENGFSETTATQLKAMGYSLDERGGIGRTELIKILRDGKREAAADIRGDD
                     SVSGY"
     gene            3540..>3781
                     /locus_tag="VEV83_13090"
     CDS             3540..>3781
                     /locus_tag="VEV83_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1572 family protein"
                     /protein_id="HYK46105.1"
                     /translation="MQTEAAFLESSIKKFRFQKNLGDKTFAQLEDKDLFFKPSAESNS
                     IAIIVQHMTGNMLSRWTNFLTEDGEKPWRERDKEFE"
BASE COUNT         1050 a          801 c          875 g         1055 t
ORIGIN      
        1 accaggtcag catcctgcac tccttcctgc aaatcggtaa acgtagagat atttgacaat
       61 gcctcttttt tctgttcttc cgtaacagca cccttgctga tctgacggtc aagatttttt
      121 gcgatcgttt gcaatgcttt cccgatttgc tccgcattca cgtccaaaag gttcacctca
      181 aaattatttt gagcaaatac atgggcaatg ccattgccca tcgtgccggc accaaccaca
      241 gcgactgttc ttatcatgat gtcaagtttg atttgaacgt ttcatcgttc gaacggtgat
      301 gaacatcaaa cgctgaaact ccgaaactat gaaagtttga aaactgattt actgcatagt
      361 ttgaagcaac tgttttcctt cttcctttat cgccgcatcg tcgtagaccc ggtttggtaa
      421 ttttacgagc ttattcaata catcaattgc ttttcccggc tggtgatcat actggtacac
      481 ttttgcaaga tccaggtacg ccaaggcaaa gtatggatca atactccggc ttttttccat
      541 gtaaaacgcg gcggaatcga tctgtgtgtc gggtatacct ccatagaacg ccttaactgc
      601 tgcgcgtttt aaccacgaaa gtcgtatcaa ttcgaaatgc catttaccca gaacataatt
      661 agctttagcg tggttagcat ctactgcaag tgctttatca gcgtaaattt ttatattctt
      721 tacatcgtca atggtccgct tattatcatc ctcgacctct gtcatttttc ctgcgacaag
      781 cgccatcgcg taacatgcat ccgcattcga agaactttgc tggtatgccc tgttcgcata
      841 atcatttgca ttttgaaagt acgccgcctt ttgctttttg tctttctgac gttcaccaat
      901 gctgcagctc aattctgcgc acttaactaa cgcaaatatg ctggacggat ccgcggcagc
      961 aatttgttta tatttttcca gggcgcccgg ttcatcaaac ttaagctcaa ggttttttgc
     1021 ctccttaagc agggcgttat tgtcctgggc atgtacattt gaagccaacg cgaggagtac
     1081 aaaaaaagca gggaactgtt ttgaaaaagc tcttagcata ttcattcatc aatacgatta
     1141 atgcatgcgt ttgcctccgc gttttaaagt gcactcggcg gagacattgc cgttaaagaa
     1201 aggaatgggc ggattaagtt ttttgatctt cacgcacact tcttcagctt tggcataggt
     1261 gctcaggatc tcctgcgcga tctctgtggc cagtgtttca agcaagggag tcggttgttc
     1321 catgcgctgt tttacgagct ggtaaaggag agtgtaatca atcgtttcat ccatgtgccg
     1381 aatcggaatt gtcctgggtt cgaagtagac gcttagatcc acttcaaaat cgccaccggt
     1441 cctgctttct tcttcatgca ctccatgaaa agcgtgaaag agaagcctcg acaattctat
     1501 tttcaacatg cggcaaaact attggttcac atcctttcaa acaaaagaaa ttagacgcta
     1561 ttcttattgt gtgtaaggcc tgaaagcttc cttaaaattt ttccgcgtca tgcttttttc
     1621 cttacgtttg atctcatgaa gagattcttt tttacagtaa ctgcttttgc atccgtactc
     1681 gtgtcatgcg gacaagaacg gatcgttggg cccggcaagg atgttgatcc gtatcatttt
     1741 atatcggtca agactttaac gtgtacacat gcgtgcgtag caagcgccca tccgctggcg
     1801 agcgaagtgg ggctggcaat catgaaacga ggtggtaacg cttttgacgc gatgatcgca
     1861 acgcaactca ctttggctgt agttcatccc gccgcaggca acctgggtgg cggtggattt
     1921 atgcttgcac gaaaaacaga tggttcttta ttggccctcg attatcgtga aatggcaccg
     1981 gcaaaagcaa gccgcgacat gtacctcgac cctgcaggca acgcgataac ggatctttct
     2041 caaaatggtc atttatcatc gggggtcccg ggaacagtgg ctggtttatt tgcagaagcg
     2101 aaatatggca agctcccgtt taaggagttg attcagcctg cgatcgacct ggctgaaaaa
     2161 ggtttcgtat tgacgaaggg tgaagcaaat ggactgaact ataacaaatc cgactttata
     2221 aaatatagta caaaagcaac agcatacgtg aaggagcaag actggaaaga aggtgatacg
     2281 atttttcaac cggagcttgc aaaaacttta atgcgccttc gcgacaatgg tttgaaaggt
     2341 ttttatgaag gagaaactgc aaaactgatc gttgatgaaa tgcaacgcgg ccacggttta
     2401 gtgacttatg atgatttgaa aaattattct gtcaaagcac gaaacgctat tgagtttgat
     2461 taccgaggat atcatgttgt tagcttcccg ccgccgagca gcggcggaat tttgattgga
     2521 caaatgctga aaatgatcga gccatatcct atgcatgatt acgggtttca aactgcgaga
     2581 agtgtgcaag taatgattga agctgaacga agagcttttg cagaccgcgc agaacacatg
     2641 ggcgatcctg attactggaa agtgccgcag caaaccttac tgagtgatgc ttatttaaag
     2701 caacgcatga acaattatga ttcgacaaaa gcgggaaaga gtgcggatat aacagcaggc
     2761 attattcatg aaagcgacca aaccacacac atcagcatca ttgacgggga tggaaatatg
     2821 gttgctgtta caaccacgct gaataatagc tatggaagca agacagttgt tggtgacgcg
     2881 ggatttttga tgaatgacga aatggatgac ttcagtgtta aacctggtgt gccgaatatg
     2941 tatggcgcta ttggcggcga tgcaaatgca attgctccgg gaaaacgaat gctgagttct
     3001 atgacgccga cattggtgtt gaaagacaat aaacctttca ttgttgtagg aacgcccgga
     3061 ggaactacca ttccgacctc cgtgtttcag tcgatagtga acatcattga ttttgatatg
     3121 agcgcttcag acgcagtgga taaaccgaag ttccatcatc aatggctgcc ggatactgta
     3181 tacattgaaa acgggttttc agaaacaacg gccacacaat taaaagcaat gggctacagc
     3241 ctcgatgaaa gaggtggcat tgggagaacg gagttgatca aaattttacg ggatggaaaa
     3301 cgggaagctg ctgccgatat aagaggagat gatagtgtga gtgggtattg aagtttgaag
     3361 tctgaggttt gaagtttgac gtttgaagtt tcgtcgaccg tcatttcgat gccaggagaa
     3421 atctctgaag aagccaaatt cataaatgaa atttttcagc agtaatattt gttattctta
     3481 gccggttgct tgcttttgaa tttcaagttc ggctgtgttg tttaaaaaag ttacaattca
     3541 tgcaaacaga agcagcattt ttagagtcgt cgatcaagaa atttcgattt cagaaaaatc
     3601 tgggcgataa aacatttgca caacttgaag acaaggatct cttcttcaag ccgtcggcag
     3661 aaagcaattc aattgcgatc atagttcagc acatgaccgg caatatgctc agccgctgga
     3721 cgaactttct caccgaagac ggagaaaaac cctggcggga acgggacaaa gaatttgaag
     3781 a
//
LOCUS       DASQJI010000477         9029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2054020,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000477 DASQJI010000000
VERSION     DASQJI010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9029
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054020"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VEV83_13095"
     CDS             <1..829
                     /locus_tag="VEV83_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division FtsA domain-containing protein"
                     /protein_id="HYK46106.1"
                     /translation="KTKDLVLQPLASASAVMSEIDMEAGVAILDIGGGTSDLAVFYDG
                     ILKHTAVIPFGGENITNDIRMGLGVLKSQAEAMKVQFGTALADEAKANAYITIPGLKG
                     MAPKEISVKNLAAIIQARMGEILDFVTYHIKQIGLDSRALNGGVILTGGGSQLKHLIQ
                     LTEYCTGISARIGYPNEHLAPNHIDELKKPMYATCIGLILKGYNDYEHKRKEFDNKFK
                     KIEVPEILKNKSVKTNGAEPKEEKVDMKKRKGLNNFWDKFKDSLIDMFKEEDDKEIR"
     gene            901..2784
                     /gene="ftsZ"
                     /locus_tag="VEV83_13100"
     CDS             901..2784
                     /gene="ftsZ"
                     /locus_tag="VEV83_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HYK46107.1"
                     /translation="MIHFDLPKQKSSIIKVLGIGGGGSNAVNYMYAQDIEGTDFIICN
                     TDAKALEQSSVPNKVQLGPYLTQGLGAGADPEVGKHATEESLEEIRRILEVNTKMAFI
                     TAGMGGGTGTGGAPIIAQVCREMGILTVGIVTTPFGFEGPRRLEQAEEGIKRLQPYVD
                     TLLIISNDKLRAQYGNLKMKEAFSKADNVLATAAKCITDIINSRGHIIVDFADVCTVM
                     KNGGVAILGSAAVEGEGRAQRAIESALNSPLLNDNDIRGAKWILININSAEGEFECTM
                     DELEIINSYLRMQAGEKTDVIVGMGYDPMLERKIGITLIATGFEQKDPVAALHMETMP
                     ARKIETKEQKIVMRLGVEGEEKKMYDQRPLPFEEKDPYAPVLSEDVASAIQTQEPVIV
                     NEIKEQPVVVTKANEPPVINFALYPEEIETDEKKQAPAPEVPEMLALRYEEKAAEDKN
                     VSSGGYLNRPMNIYAEKSLSQEPPSELDTPVEIKKEEIANKEEILKDEQPLKKQEPVL
                     VFETETMELELVIKEEQPSKHVSPPPADIQLNDEEEEQKRRAEERIHKLRNLSYNMNS
                     METSNEYENVPAYVRRNLELFGNNKLTSVEDFYSKVAVKKDENDQTQISTINTFLDGK
                     KPD"
     gene            2941..4119
                     /locus_tag="VEV83_13105"
     CDS             2941..4119
                     /locus_tag="VEV83_13105"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYK46108.1"
                     /translation="MILQQHNMKEKFLLNRDIVYLNHGSYGACPKAIFQDYQNWQVKL
                     EAEPVQFLTKKYYDALSVSKQALAEFIGCNNDDFFFLQNPTTAMNQVVKSLPLQPGDE
                     VLSTNHEYGAIDKTFDFYSRKTGFVCRRQNISLPLLSKEQFIDEFWKGYNERTKVVFL
                     SHLTSTTALIFPVKEICQRAKQLGLLTVIDGAHVPGHIPLNLHEVQPDYYTGTLHKWL
                     LSPKGCSFLYVRNELQQKIEPLIVSWGYETDLPTKSKFLEENEMQGTRDVSAFLTVPA
                     IFQFFKENNMQEKQSVCRQTILEQYPLFCELLDTRPLCKASDEFLGQMCSLPIRAKDP
                     FQLKELLYNKYKIEIPVMQRRDETYLRISYQVYNTLDELEYLKEVIGQLLADRVLTEH
                     "
     gene            4294..7692
                     /locus_tag="VEV83_13110"
     CDS             4294..7692
                     /locus_tag="VEV83_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HYK46109.1"
                     /translation="MSYVPQNKIRIVTAASLFDGHDAAINIMRRIMQSKGAEIIHLGH
                     NRSVREIVECAIEEDVQGIAITSYQGGHLEFFKYMKDLLDENDCGHIKIFGGGGGTIL
                     PQEINELHKYGITRIYSPDDGRRMGLEGMIEDLLRSCDYPLNGNGEYKKPMTLGEIKD
                     VRSVARQITNAENRTNGQTSNVEPQTSNFKRQTTIPTLGITGTGGAGKSSVTDEIVRR
                     FLNSFADKTIAVISVDPSRKKTGGALLGDRIRMNSISHPRAYMRSLATRDDNTALSAA
                     VEQALEICKAAAFDFIILESAGVGQGDASILDYCDVSMYVMTPEYGAASQLEKINMLD
                     YADLVCINKFDKAGAQDALHDVKKQYKRNRNLWNAKDDEIPVIGTIASQFNDAGINEL
                     FEQLMASVERKTSVHFGDVVVHQHASDTTAKSLIIPPKRVRYLSEISESNREYDRWVN
                     EQCANASKLYQVNGTLDAINDFSFTEGRMGFVTALIEKMKEQYGEQLDPDCRRLINDW
                     PSIKEKYSKDFLEYTVRGKTIKQPLNTTSLSGTRIPTVVLPKYNDWGDILRWQLQENL
                     PGEFPFTAGVFELKRQGEDPTRMFAGEGGPERTNKRFHYVSLDQPAKRLSTAFDSVTL
                     YGEDPDQRPDIYGKIGNSGVSIATVDDAKKLYSGFDLCDAKTSVSMTINGPAPIILAF
                     FMNAAIDQQCEKWIETNCQWQTINDKIQNKFSRVPRPIYYNPSSPERLPEGNNGLGLK
                     LLGVSGDEILSQDVYEKIKSATLAQVRGTVQADILKEDQAQNTCIFSTEFALKLMGDV
                     QEYFTTHQVKNFYSVSISGYHIAEAGANPVTQLAFTLANGFTYVEYYLSRGMQIDDFA
                     PNLSFFFSNGMDAEYSVIGRVARRIWAKAMKYKYHANSRSQKLKYHIQTSGRSLHAQE
                     IDFNDIRTTLQALYAIYDNCNSLHTNAYDEAITTPTEESVRRAMAIQLIINRELGSAK
                     TENFIQGSFIIEELTDLVEEAVLAEFDRITERGGVLGAMERMYQRNKIQEESLYYEHQ
                     KHTGELPIVGVNTFLNKKGSPTIMPVEVIRSTTEEKEQQIENLKAFWKRNASKSSEAL
                     EQLKAAALNNANLFAELMETVKYCSLGQITHALYEVGGQYRRNM"
     gene            7867..8094
                     /locus_tag="VEV83_13115"
     CDS             7867..8094
                     /locus_tag="VEV83_13115"
                     /inference="COORDINATES: protein motif:HMM:NF022150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KGG domain-containing protein"
                     /protein_id="HYK46110.1"
                     /translation="MANKQNEKQGTSNRGFAAMDERQQREIAKKGGEAVSRNREHMAE
                     IGKKGGEAVSANRQHMSEIGQKGGESRRKSR"
     gene            8251..8445
                     /locus_tag="VEV83_13120"
     CDS             8251..8445
                     /locus_tag="VEV83_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46111.1"
                     /translation="MAGRGDNNKHGSSGRGSSNQSNQGTSGTKAKKSNHGEQTGGAPS
                     KKQPKAKDTKVRRNTDVDQE"
     gene            8499..8906
                     /locus_tag="VEV83_13125"
     CDS             8499..8906
                     /locus_tag="VEV83_13125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46112.1"
                     /translation="MSKQRDRHLEAPGEANRDKHINFLAEEHGDQDPRNEGFDENDKE
                     VDPGDTAARNSAVGVDDGLLGTNNPLQTPAEKKHGSSSSATLVAEKTIPLDPDEKETL
                     ADKISINKNNDDILTRVTDEQNIGDTNEEDQAH"
BASE COUNT         2829 a         1853 c         2192 g         2155 t
ORIGIN      
        1 gaaaacaaaa gacctggtgc ttcagccact ggcgtctgcg agcgctgtga tgagtgaaat
       61 tgacatggaa gccggtgttg cgattcttga cattggcgga ggcaccagcg acctcgctgt
      121 tttttacgac ggtattttga aacacactgc agtaattccg ttcggcggcg agaatatcac
      181 gaatgatatt cgcatgggtt tgggcgttct caagagccag gcagaggcga tgaaagtaca
      241 gtttgggact gcattagcgg acgaggcaaa agcgaatgca tacatcacca tccccggctt
      301 gaagggaatg gctccaaaag aaataagtgt aaaaaatctt gctgccatca tacaggcccg
      361 catgggagag atactcgact ttgttactta ccacattaag caaatcgggc tggatagccg
      421 cgcattgaac ggcggcgtta ttcttaccgg tggtggttcg cagttaaaac atcttattca
      481 acttaccgaa tactgcaccg gcatcagcgc acgcatcggt tatcctaacg aacatcttgc
      541 accgaatcat atagatgaat tgaagaagcc aatgtatgca acatgtatcg gcctcatcct
      601 gaaaggctac aacgattatg aacataaacg caaagagttc gataataaat tcaagaaaat
      661 tgaagtaccg gaaattttga aaaacaaaag tgtgaagacc aacggtgcag aaccgaaaga
      721 agaaaaagtg gatatgaaaa aacgtaaagg gctcaacaat ttctgggata aattcaaaga
      781 cagcctaatt gatatgttca aagaagaaga cgataaagaa atcaggtagt aacgggtcgc
      841 cggtgaccgg ctacctgcaa cttgcaacaa aatacttact aactccaaat taaaattctt
      901 atgatacatt ttgatcttcc caaacagaaa tcctcgatca ttaaagtgtt gggtattggt
      961 ggtggtggaa gcaacgcagt caactatatg tatgcgcagg atattgaagg cacagacttc
     1021 attatctgta atacggatgc aaaagcgctt gagcaaagct ccgttcccaa taaagtacaa
     1081 ttggggccgt atcttacaca aggcctcggc gcgggcgccg accccgaagt tggtaaacac
     1141 gcaaccgaag aaagccttga agaaatacgc cgcatccttg aagtaaatac aaaaatggct
     1201 ttcataacgg cgggtatggg tggcggaaca gggacgggtg gcgcacccat cattgcgcag
     1261 gtttgtcgtg aaatgggcat tcttactgtc ggcatcgtta caactccatt tggcttcgaa
     1321 ggtccgaggc gtttagagca agccgaagaa ggaataaaac gtttgcagcc ttatgtggac
     1381 actttgctga tcatcagcaa cgataagttg cgtgcgcaat acggcaattt gaaaatgaag
     1441 gaagccttta gcaaggcaga taatgtactg gcaactgctg ccaagtgcat aactgatatc
     1501 ataaatagtc gtggtcatat catcgttgac ttcgcggatg tttgtacagt catgaaaaat
     1561 ggcggcgttg cgatcttagg aagcgcagcg gttgaaggcg agggccgtgc acaacgcgca
     1621 attgaatcgg cattgaattc tcctttgttg aacgacaacg atatacgtgg cgcgaaatgg
     1681 atattgataa atatcaacag tgcagaagga gaatttgagt gtacgatgga tgaactggag
     1741 atcatcaaca gttacctgcg catgcaggcg ggtgaaaaaa cagatgtgat cgtgggtatg
     1801 ggttatgatc cgatgcttga gcgaaagatc ggcatcacac ttatcgcaac cggctttgaa
     1861 caaaaagatc cggtggctgc actccatatg gaaacaatgc ccgcacgcaa gatcgagact
     1921 aaggaacaaa agatcgttat gcgacttggc gttgaaggag aagaaaagaa aatgtatgat
     1981 cagcggccgt taccgtttga ggagaaagat ccttatgccc ccgtcttgag cgaggatgtt
     2041 gcttcagcga tacagacgca ggaaccggtt atcgtaaatg aaataaagga acaacccgtt
     2101 gttgtaacta aagcaaacga gccaccggtg atcaatttcg cattatatcc cgaagaaatt
     2161 gaaacggatg aaaaaaagca ggcgcccgcg ccagaagttc ctgaaatgct cgctctgcgc
     2221 tatgaagaaa aggctgctga ggataagaat gtttcttcag gcggttattt gaacaggccg
     2281 atgaatattt atgcagaaaa atctttgtcg caggaaccgc cgtcagaatt ggatacgccg
     2341 gttgaaataa agaaggaaga gattgcaaac aaagaagaaa ttttgaagga tgaacaacca
     2401 ttaaaaaagc aagagcccgt tctcgtattc gaaacagaaa cgatggaact cgagttggta
     2461 ataaaagaag aacagccttc aaagcatgtg tctcctcctc cggccgatat tcagttgaat
     2521 gatgaagaag aagagcagaa acgtcgtgct gaggaaagga tacataaact gcgcaatctt
     2581 tcatacaata tgaacagtat ggagactagt aatgaatatg aaaatgttcc cgcttatgtg
     2641 cgcaggaatc tcgagctgtt cggaaataac aagctcactt ctgtagaaga tttttacagc
     2701 aaggtagcgg taaagaaaga tgagaatgat caaacacaga tttcgacgat caatacgttt
     2761 ctcgacggta aaaagccgga ttaatgatta gcagtagttt tagttgttgt ccctcccgct
     2821 tgcggggggg attttttttg cgacagccac cttcacgtaa tgttgttagt cgctcatcaa
     2881 aactgatgtg agcgcgacca ggcataatat ttattctgtg aatttttaaa actcagatat
     2941 ttgatacttc agcagcataa catgaaagag aaatttcttc tgaaccggga catcgtttat
     3001 ttgaaccatg gatcatacgg tgcgtgcccg aaagcgatat ttcaggatta tcaaaactgg
     3061 caagtaaagc ttgaggcgga gcctgtgcaa tttctgacta agaaatatta tgatgcattg
     3121 tcagtgtcga agcaagcgct ggctgaattc atcggttgca acaacgatga ctttttcttt
     3181 ttgcaaaatc caacaacagc aatgaaccag gtggtaaaga gcttgccact gcagcctggt
     3241 gatgaggtgc tgagcacgaa ccatgagtac ggcgcgatcg ataaaacctt cgacttttat
     3301 tcaaggaaga cgggctttgt ttgccgaaga caaaatattt cattgccgct gctgagcaaa
     3361 gaacagttta tcgacgaatt ctggaaagga tataatgaga gaacgaaagt tgttttcctt
     3421 agccatttga ccagtacgac cgcgcttatc ttcccggtaa aagaaatttg tcagcgcgca
     3481 aaacaactcg gcttgctcac tgtcatcgac ggcgcgcatg tgccaggcca tattcctttg
     3541 aacttgcacg aagtacaacc agattattat acaggtacac ttcacaaatg gcttttgagc
     3601 ccaaaaggat gctcgttttt gtacgtacgg aacgagcttc aacaaaaaat cgaaccgttg
     3661 atcgtgagtt ggggatatga aacggacttg ccgactaaat cgaaatttct agaggaaaat
     3721 gaaatgcaag gcacacggga tgtatcagcg tttctaacgg tcccggccat tttccaattc
     3781 tttaaggaaa acaatatgca ggaaaagcaa tcagtttgca gacagacgat tttagaacaa
     3841 tacccgcttt tctgcgaact gctagacaca agaccgttgt gcaaggcgtc cgatgaattc
     3901 ttaggccaaa tgtgcagcct accgatcagg gcaaaagatc cgtttcaatt gaaggaactc
     3961 ttgtataata aatataagat agagatacca gtgatgcaac gtcgcgatga aacttacttg
     4021 cggatctctt accaggtata taacacgtta gatgagcttg aatacctgaa agaagtcatt
     4081 ggccagttgc tcgcagatcg tgtccttact gaacattaag aataatgaaa cctgcgttga
     4141 agtatatgca atctatcctg gctataggga ggatgattcg gaataatagc tggtttaatc
     4201 ggcgaacatc ctttccgtaa cttcctgctt ctcttcctaa cggctgttca tcatttccat
     4261 aaagaactaa ttttgttgct ataagtttgc tgtatgagct atgtgcctca gaataagatc
     4321 agaattgtca ccgcggcatc gttgtttgac ggccatgatg ccgcgatcaa tataatgcgt
     4381 cgcatcatgc aaagcaaagg ggctgagatc attcaccttg gtcataaccg aagcgtaagg
     4441 gagatcgttg aatgcgccat tgaagaagat gtgcagggca tcgccatcac gtcttaccag
     4501 ggtggccacc tggaattctt taaatacatg aaagatctgc tcgacgaaaa cgattgcggg
     4561 catataaaaa tatttggcgg cgggggcgga actatccttc cacaggaaat taatgaattg
     4621 cacaaatatg gtataacaag aatctattcg cctgacgacg gcagacggat gggacttgag
     4681 ggaatgattg aagatctcct tcgctcgtgc gattatccgc ttaatggaaa tggcgagtac
     4741 aaaaagccaa tgacactcgg tgaaataaaa gatgttagaa gcgttgccag gcaaataaca
     4801 aatgccgaaa accgaacgaa cggtcaaacg tcaaacgtcg agcctcagac ttcaaacttc
     4861 aaacgtcaaa ccacgatccc aacattgggc ataacaggca ccggtggcgc aggtaaatct
     4921 tccgttacag atgagatcgt tcggcgcttc ttaaattcat ttgccgataa aaccatcgcg
     4981 gtgatttcag ttgatccatc gcgtaagaag accggcggcg cattacttgg cgacaggatc
     5041 cgcatgaatt caatttccca tccacgagca tacatgagga gccttgctac gcgtgatgac
     5101 aacacagcgc ttagtgcggc agtagaacag gcactggaga tctgcaaagc agcagctttt
     5161 gattttatca ttctggaatc tgcaggtgtt ggccaggggg atgcatcgat ccttgattat
     5221 tgcgacgtaa gtatgtatgt gatgacgcct gaatacggag ccgcatcgca attggaaaaa
     5281 ataaacatgc tcgactatgc agaccttgtt tgcataaata aattcgataa ggcgggggcg
     5341 caggatgctt tacacgatgt gaagaagcaa tataaacgaa accggaattt gtggaacgcg
     5401 aaagatgatg agataccggt tataggcacg attgcttcgc aattcaatga tgcaggcatc
     5461 aatgaattgt tcgaacaatt aatggcttcg gttgaaagga aaaccagtgt ccattttggc
     5521 gacgtggtcg ttcaccaaca tgcgagcgat accacggcaa aatcgcttat cattccgccg
     5581 aagagagtgc gatatctttc tgaaatttcc gaaagcaaca gggaatatga caggtgggtg
     5641 aatgaacagt gcgcgaatgc atctaaactg taccaggtga atggtacctt ggacgcaata
     5701 aatgattttt cttttacaga aggcagaatg gggtttgtca ccgctttgat tgaaaaaatg
     5761 aaggagcaat atggtgagca attggatcct gattgtagaa gactgatcaa cgattggccg
     5821 tcaataaaag aaaaatactc aaaagatttt ttggaataca ctgttcgggg aaaaacgatc
     5881 aaacaacctc tgaacacaac ttcactcagc gggacgagaa tcccaacagt cgtgttgccc
     5941 aaatacaacg attggggaga cattctaaga tggcaactgc aggagaacct tccgggtgaa
     6001 tttcctttta ctgccggcgt gttcgaattg aaacggcagg gcgaagatcc gacgagaatg
     6061 tttgccggcg aaggcggacc ggaacgaaca aataagcgct ttcactacgt atcgctcgat
     6121 cagccggcga aacgtttatc gactgcattt gacagcgtga cattgtatgg tgaagacccg
     6181 gatcagcgtc ccgatatcta cggcaagatc gggaatagcg gcgtgagtat agccacagtt
     6241 gatgacgcga aaaagcttta cagtggattt gatctatgcg atgcaaagac ctctgtaagc
     6301 atgaccatca atggcccggc gccgatcatt cttgcttttt ttatgaatgc cgctattgac
     6361 cagcagtgcg aaaagtggat tgaaacaaat tgtcaatggc aaacgatcaa tgataaaatt
     6421 caaaacaagt tcagccgcgt tccccgccca atctattaca acccttcatc gcctgaacgc
     6481 ttgccggaag gaaacaatgg tctcggttta aaattgcttg gcgtgagcgg cgatgaaatt
     6541 ttgtctcaag atgtgtatga aaaaataaag agtgccacgc tggcgcaggt aaggggcacc
     6601 gtgcaggctg acatacttaa agaagaccag gcgcagaata cctgtatatt ttctacggaa
     6661 tttgcgttga agctaatggg tgatgtgcag gaatatttca ctacgcacca ggtgaaaaat
     6721 ttttacagcg taagcataag cggatatcat attgcggaag ccggcgctaa ccccgtgacg
     6781 caacttgcat ttactctggc caatggcttt acgtatgtgg aatattattt gagccgcggc
     6841 atgcagatcg acgactttgc gcctaacctc tctttctttt tcagcaacgg gatggatgct
     6901 gaatacagtg tgattggaag agttgcaagg cgtatctggg cgaaggcgat gaagtataaa
     6961 tatcatgcga atagtcgctc tcagaaatta aaatatcaca ttcaaacgag tggcaggagt
     7021 ttgcacgcac aggaaatcga tttcaatgac atcagaacca ctttgcaggc gctatatgca
     7081 atctatgaca actgcaactc gctgcacaca aatgcgtatg atgaagcgat cacgactcct
     7141 actgaagaaa gtgtgcgcag ggcaatggcg atccaactca tcattaaccg tgaattaggc
     7201 agcgcaaaaa cggaaaattt tatacagggc tcatttatta ttgaggaatt aaccgacctc
     7261 gttgaagagg ctgtgcttgc agaattcgac cggatcacag aacgtggcgg cgtgctcggt
     7321 gcgatggaaa gaatgtatca gcgcaacaag atccaggagg aaagcctgta ttacgaacac
     7381 caaaagcata ctggcgaatt gcctatcgtt ggcgtgaaca ccttcctaaa taaaaaagga
     7441 agtcctacca taatgcccgt ggaggtgatc cgcagcacca ctgaggagaa agaacagcaa
     7501 atagaaaatc taaaggcgtt ttggaaacgc aatgcctcaa aaagctcaga agcattagag
     7561 caactgaaag ccgcggcact caataacgcg aatttgtttg cagaacttat ggagaccgtg
     7621 aaatattgtt cactcgggca gatcacacat gctttgtacg aggttggcgg acaataccgt
     7681 agaaacatgt agacataatg ccgccttcgt gtgtattaaa ttccattttt cattttcctc
     7741 tcatgttctt gcctttgaca gaagtttgcc tgttacataa attttttaat tgtctctaaa
     7801 acgaacgtat gatggcaaaa aatttgagcg gttaaaagtg taatctataa cctaaaagac
     7861 ttcaacatgg ctaacaaaca aaatgaaaaa caaggtacgt ccaaccgggg ctttgccgca
     7921 atggacgaaa gacaacaacg ggaaattgca aagaaaggag gcgaggcggt tagtagaaac
     7981 cgcgagcaca tggctgaaat tggaaagaag ggtggagagg ctgtaagtgc caatcggcaa
     8041 catatgagtg agattggaca aaagggaggc gaaagtcgga ggaaatcaag atagttttcc
     8101 tctcaacaat ccgaaaccgt gtaaacagag accaaaggct gttttagagc agcctttttt
     8161 aatttcagcc ttcaattctt cttttcttgt tggcataatt gatgtgaatc taccattgtt
     8221 aacctaatcg tattctaata actaatcgtt atggcaggac gtggagataa caacaagcat
     8281 ggcagttccg gccgtggcag cagtaaccag agtaaccagg gcacgagcgg aacaaaagca
     8341 aaaaaatcca atcacggcga acaaactggc ggggcgccat cgaaaaagca gccgaaagca
     8401 aaagacacaa aagtgaggcg aaatacagat gtggatcaag agtagtcccg gccgatggta
     8461 tggatatcgg cgaattccgc tgattttaaa ttttatttat gtcaaagcag agagatcgtc
     8521 atcttgaggc gcctggcgaa gctaatcggg ataagcacat aaatttcctt gccgaagaac
     8581 atggagatca ggatccaaga aacgaaggtt tcgacgaaaa tgataaggaa gttgatccgg
     8641 gtgataccgc ggccagaaat tctgcggtcg gcgttgatga tggactgtta ggtaccaata
     8701 acccgttgca aacacctgct gagaagaagc acggcagctc aagttccgct acgctcgtgg
     8761 ctgagaagac tattccgctc gatccagatg aaaaagaaac gcttgcagac aaaatcagta
     8821 ttaacaagaa taacgacgac attctaaccc gtgtaactga tgagcagaac atcggtgaca
     8881 cgaatgaaga ggaccaggct cattaattaa agttcagata gttcaaccct aaaccttttt
     8941 tccaaccgca taggatcgcg atctaatatt cctcgcttca agtttgatta tttcgctttt
     9001 cagcctattt ttgccgtcct ttaataggg
//
LOCUS       DASQJI010000478        12553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_825417,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000478 DASQJI010000000
VERSION     DASQJI010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12553
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825417"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(292..1284)
                     /locus_tag="VEV83_13130"
     CDS             complement(292..1284)
                     /locus_tag="VEV83_13130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46113.1"
                     /translation="MINAIQQTKRPGWFSEPKNVATTVVGLSLFAAIAYGFVTYVLPW
                     LITVTWSLINLIIGGAILGFILMVITNKKFWRALRYFSEFIANYTIGVAIELNPFRIL
                     QMKIDQGYKDRETLFRQSARLKGKQSELVDKLNEKEKELQLNVQKVKILQQEKRNSKQ
                     IDLYANSVLRCREYIDNVTPIVGDLNKLIKFSEAAYEESGIMLEDAKLDLEAKRDLYY
                     SVTTGLSAVTSAMKAFKGDDDLNQDAEKALSILKQQIGEKIGNIKSAIDVTQRFMDDK
                     VLEDKAKSAQAIELINNFNLHTDFNYTNRSLDNNKDNGKLRGVTISDRYRALLD"
     gene            complement(1354..1971)
                     /locus_tag="VEV83_13135"
     CDS             complement(1354..1971)
                     /locus_tag="VEV83_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46114.1"
                     /translation="MTHFGKKILSAFVEVTEEKPVTATEVIEPSSTTYASTGGTVAAG
                     SEKFKQYFDQLFKDANLPGPDYFEFSKMTEAMIGITDERARYSAAFAGLSVQGLDKLK
                     LLNTAAQYIEVIETDADNFSNTVDAALKEKVQTKQQQIADNAKRIQTLTNEISDLQNK
                     IAVLHNEVKENEEKIESSSGGYKAASENMKQKILFDIEKIKQYIT"
     gene            complement(1990..2175)
                     /locus_tag="VEV83_13140"
     CDS             complement(1990..2175)
                     /locus_tag="VEV83_13140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46115.1"
                     /translation="MKPILLVVAGIAMLMLAIYLIRKAENKQFRPLQERLNSKGIQMK
                     KSDSFLPNEAAIYHFFF"
     gene            complement(2700..3458)
                     /locus_tag="VEV83_13145"
     CDS             complement(2700..3458)
                     /locus_tag="VEV83_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46116.1"
                     /translation="MKRILIFELLFAAFLCNSCSKNSDSPTPPPPPPPSSLKVKTMTT
                     EITASGSFHFLIVSTLSYDAQDRIIKVQSDSGYTNFSYQNNLVRKDIYQNGQPTQHLY
                     YYLNSMSLLDSLITLAEGIPGRFRSDYYYNSKNQLIKIVMTSENAFGNFTDSALYEYN
                     GNGDLTTITQGDNINSYEYFDKPNVENSSFMLYPGLRPGPHLLKTSSFTYMSDSNTTT
                     YAYDFDEDGRIVTVTAQTTGVAYSQTHITRYTYY"
     gene            3758..4054
                     /locus_tag="VEV83_13150"
     CDS             3758..4054
                     /locus_tag="VEV83_13150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46117.1"
                     /translation="MTTLIKFEHISKTVTAKIVLNYEEDKKEVTVEFFGCKDELGDKL
                     LIAEIDGKWTTDSLIARKFRATYLDILNEINWMCTHEYTEVNVIGEFSELTHLN"
     gene            4219..6912
                     /locus_tag="VEV83_13155"
     CDS             4219..6912
                     /locus_tag="VEV83_13155"
                     /inference="COORDINATES: protein motif:HMM:NF024974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK46118.1"
                     /translation="MRFFLPAMLLLFLCNRISGQSCPPNIDFEQGDFTGWQCFVGQTY
                     TLAGSNVINLKPSPPTPNRHEIISADSNGVIPIDAFGKFPKLCPYGGKFSVKLGNTDV
                     GAEAEGISYTFTVPSNEDSFSFTYFYAVVFENPQHAKEEQPRFFVTAFETSTGNLINC
                     ASYNYVSTGGIPGFKKSASGGDVLYKEWSPVTIQFVGLANKQVTLEFKTADCTQGGHF
                     GYAYLDVGSGCSNILATAPYCVETNSLLLNAPYGFQSYTWYNEDYTQVLGYDQNLTLS
                     PPPVQTGKFWVDLQPYAGYGCRDTAYAVVTPLPVPDTPIAKSDYFFCQNAKAPPFQAT
                     PSINCLLLWYTDTTKPGVTDAIMPPTNTPGVFYYYVSQKVLFGCESFRKKIRVQVDPV
                     PVTSFNLDRIFACQAGNSFTCVSTSTNLLSPTYTWDFGNGATLSGPDSTTYTYPSYGS
                     FNITLQVRNGPVCSFNATHPVTVGPKPIADFVFPPLICQNETPVSLKDQSTVPQQLST
                     IAQWYWQVQGNVTTQQNPAGFIATAGGDIPVLLAVASKEGCISDTARKNLKVRYQPTA
                     SFTYDDPLCNNKMIHFTDLSFLPAGAVGENVNTWKWKMDNVPVNVQNPAYHYNSGIHT
                     TSLIATTNYGCNSTSISSSLTVHEKPLTALSINDSCAYRKIIYTAQDVSKTVQKWYWD
                     FGIGFNEDRSEIIKYFLNEGQNSFTLIGKTVDGCTDTIHRPFTIYMNKAFAGKDTMAA
                     FDQPVQLNAHGGSDNHYRWSPAIGLNDPHIENPVAIYDKDVLYRLDAMTNEGCDAHSA
                     ILVKRYNGPDIYIPTGFTPNSDRLNDVLRAFPVGMKSFEYFAVYARNGERIYYTTDFH
                     NGWDGTIRYNPAQSGTYVAVARAVDYTGKVFFKKVAVVLIR"
     gene            complement(6999..8207)
                     /locus_tag="VEV83_13160"
     CDS             complement(6999..8207)
                     /locus_tag="VEV83_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF763 domain-containing protein"
                     /protein_id="HYK46119.1"
                     /translation="MKRSGSADLPLHYGSVPKWLADRMAKLGFAITEAILTEYGKDAF
                     LQRMSNPFWFQSFGAVMGMDWHSSGITTSVMWALKKSINPNSKSLGLYICGGRGKFSR
                     ETPSELLAIAGNTGLNGNELVRSSKLSAKVDNTAVQDGFQLYMHNFILSDEGKWTVVQ
                     QGMDTANRTARRYHWHSDNIQSFVEEPHTGVCGINQGQILNLTAKEARPTREHILDFA
                     RDEPIQVLKEFQQLIMPPHHDVQAADVNLKRLGSILWLAHERAPEDFETLLLLEGVGP
                     RTIQSLTLVSEVIHGTPSRFNDPARFSFAHGGKDGHPFPVPTKVYDETISTLQTAVQK
                     SKLGNGEKSEAIKKLHQIAATAEKDFIPNKNFEAFIQKERDESWKYGGKTVSGDAKPP
                     QKVAPQLKLF"
     gene            8405..8830
                     /locus_tag="VEV83_13165"
     CDS             8405..8830
                     /locus_tag="VEV83_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46120.1"
                     /translation="MEAIESNKRVHSVFNIMRVTYGIVPIVAGLDKFTNVLTDWTHYL
                     NPAITSALPFSAQTFMMIVGVIEIVAGLIVLLRPAVGAYIVMAWLICIALQLIAGTGY
                     FDVAVRDLVMAIGAFSLAQIARTAFASKTELSTGKVAFS"
     gene            8954..9646
                     /locus_tag="VEV83_13170"
     CDS             8954..9646
                     /locus_tag="VEV83_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK46121.1"
                     /translation="MIVSAPEKGIQQYSDAEVIEHIIAGNKGMFEILIRRYNPFLYKT
                     GRGYGFNHQDTEDLMQETFVNTYLNLKQFAGRASFKTWIIKIMLNECYHKSHKYSYQK
                     EQATEILPGNSSFMFSDYKYTDNSRSLISKEFNNIVEATLQKLPDDYRMTFTLRELTG
                     LSVAETADIMQTTASNVKVRLNRAKAMLRKEIEKTYTPEDIYEFNLIYCDRIVDAVMK
                     RVYELEDEGGNK"
     gene            9774..10607
                     /locus_tag="VEV83_13175"
     CDS             9774..10607
                     /locus_tag="VEV83_13175"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HYK46122.1"
                     /translation="MKQLLVLSTAVFLLTGCKKDSIYTNLPASPAENNTQNSGYKLAW
                     SDEFNYTGLPDPLKWGYEHGYVRNNEKQYYEEARLENSEVNNGLLIITARNDNYNSHA
                     ITSASVITKDRMQFLYGKIEVSARMPIGAGSWPAIWTLGVNREKVDWPNCGEIDIAEW
                     VGRSPRIILGSMYMPGGLLGYTAKITTYDVGNNTTLSAQFHTYSIEWDSTQIKYFYDG
                     YNYATYKASGLTAKQWAPFMKPQYLLLDLAIGGTSGGPVDDTKFPFTYEVDYVRYYQK
                     K"
     gene            complement(10642..12540)
                     /locus_tag="VEV83_13180"
     CDS             complement(10642..12540)
                     /locus_tag="VEV83_13180"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46123.1"
                     /translation="MILRSTLAVTAFLCTASYSFSQAPAKQWDADFGGSENEQLAAIQ
                     QTKDGGYIAGGYTESGISGDVTQESRGSSDYWIIKTNANGVKQADARFGGTSVDQLTC
                     LQQTSDGGYILGGTSFSGIGGDKSQASRGNSDYWIVKIDRKGKKQWDATFGGTGPDEL
                     HSLQQTVDGGYILGGSSLSGISGDKTQPTKGGKDFWIVKTDANGVKQWDADFGGDLFE
                     ELFSVRQTLEGGYILGGYSLSDVNGDKTDPNRGRFDMWIVKTDENGNKKWDAAFGGND
                     DDWLAQLRQTTDRGYILGGWSWSGASGDKSQRSKGDNDYWIIKIDAKGVRQWDADLGG
                     SSNDYLTDIQQTADAGYVLGGYSSSPLSGNKTQPTQGGTDYWIVKTDVDGKKQWDADF
                     GGSEFEFLNGLQQTNDGGYILGGYSASGISGDKTEDTKGFNDFWIVKTTADSASCNIP
                     TDLRTTNIRSEGATLKWDTLAGVTNYEVEYRIAGGFSDWTIISTTTNQTTIAGLFSGT
                     QYEWKVRSVCSEKLSSEWSVKETFMTSFAAQAVENFSSTTLAGLQVYPNPLVEFATVS
                     FSLANASTVRISITDMSGKILQTIIDQNFLAGRHEVKLNRGSLVAGMYLLQVKINDGL
                     TVRKILVQ"
BASE COUNT         3306 a         2868 c         2742 g         3637 t
ORIGIN      
        1 taattccatt gattcagtca ccattttagg gcggccctgg taccacctga tacttaatat
       61 gccggcagct actacggatc ctatgatcag taatttacct gcgggtttta atttgattgc
      121 catagttgca tgttttattt gtgtgtaaaa attgtttcgt tcagggcaat attttgaaac
      181 ccggctgctg gcccttgttc agcagccgtt gcgtcgcact cttgtacgtc cggtaggtaa
      241 ttctattcaa ctgagcggac gttgcgagaa ataaaacgtt gattgaagag tctaatcgag
      301 cagggcccgg tacctgtcgc tgatggttac ccctcttaat tttccattgt ctttattgtt
      361 gtcgagagac ctgttcgtgt aattgaaatc agtgtgcaaa ttgaaattgt tgatgagctc
      421 aattgcctgc gctgactttg ctttatcctc gagcacttta tcatccataa atctctgcgt
      481 tacatcgatc gcggatttta tattccctat tttttcaccg atctgttgct taaggatgga
      541 caaagctttt tcagcatcct ggttcaggtc gtcatcacct ttgaacgctt tcattgcgct
      601 tgttaccgcc gataaacctg tggtcacaga ataatacagg tcacgttttg cttcgagatc
      661 aagcttcgcg tcttccagca tgatgccgct ttcttcatat gcggcctctg agaattttat
      721 cagcttgtta agatcgccaa cgataggtgt cacattgtcg atatattcac ggcaacgcag
      781 tacactgttt gcatacaggt caatttgttt tgaatttcgt ttttcctgtt gcaggatctt
      841 tactttctga acgttcaact gcagttcttt ttctttttca ttcagcttat cgaccagttc
      901 actttgtttc cctttcagcc tggcagattg acgaaataat gtttccctgt ctttgtaacc
      961 ctggtcaatt ttcatttgaa ggattctgaa tgggttcagc tcgatagcta caccaattgt
     1021 atagttcgcg atgaattcag aaaaataacg cagtgctctc cagaattttt tattcgtgat
     1081 gaccatcagt ataaatccga gtatagcgcc accaataatc aaattgataa gactccaggt
     1141 aactgttatc agccagggca atacatacgt tacaaaaccg tatgcgattg cggcaaagag
     1201 ggacaagcca acgaccgttg ttgccacatt cttcggttca gaaaaccagc ctggcctttt
     1261 cgtttgttga attgcgttga tcattttatt ttttgttttt attgttgctg tgataaattg
     1321 acgtttgata attcagaatt gacgattcac gtctcaagtg atatattgct ttatcttctc
     1381 gatgtcgaat aagattttct gtttcatatt ttccgacgca gctttataac ctcctgagct
     1441 gctttcaatt ttttcttcat tttctttcac ttcattgtgc agcaccgcta ttttattttg
     1501 cagatcgctt atctcgtttg taagcgtttg aatacgcttc gcattgtcgg cgatctgctg
     1561 ctgctttgtt tgcacttttt cttttaatgc cgcatccacc gtgttgctga aattgtcagc
     1621 atccgtttcg atcacttcga tgtattgcgc cgcagtgttc aacaatttta gtttgtctaa
     1681 accctggacg cttaaacctg caaaagctgc actgtatctt gctctttcat ccgttatgcc
     1741 gatcatggct tccgtcattt ttgaaaactc gaagtaatct ggtccgggaa gatttgcatc
     1801 tttgaaaagc tggtcgaagt attgtttaaa cttctctgag ccggcagcta cagtgccacc
     1861 ggttgaagcg tatgtggtcg aactcggttc aattacctcc gtcgcagtaa caggtttttc
     1921 ttccgtgact tcaacgaaag cggaaagaat ttttttgcca aaatgtgtca tattcaggtt
     1981 tttaattttt caaaaaaaga agtgatatat cgctgcctca tttggcagga aggaatcgga
     2041 tttcttcatc tgaattcctt ttgaattcaa tctctcttgc aatggccgaa actgtttatt
     2101 ttcagctttg cgaataaggt atattgccag catcagcatg gctatgcctg caacaaccaa
     2161 taaaattggt ttcatgtaat ttttgatttg attaaacctt tgcggtcggt gaggcttgcg
     2221 ccttctttgg aatctttact gtgtggtaag tattacaggc tggagatttc cggtggattt
     2281 tcccttaatc tgcaaagggt aaataactct tccagaaact tgttcatcta agtggagaat
     2341 gttctcctat ttgatttgac ggcgtaaagt tatatactgt tggaaattgc gtataaaaga
     2401 tctaatacaa acggtttttt ttatttcaca aatggtaaag tatgtgtgat gaatgcaaac
     2461 acatctcttt cgagatcttc acagataaca ggcggcaatt tttttaagaa agtagcggcg
     2521 aaagattcgc gttcatccag tatacaataa ctgagattga ggttgtcctg gaaacgttta
     2581 tcggtttact caattgtctt cagcaatcaa aagtttcaaa ctttcttgaa ggacggggag
     2641 aagaatgcgc tgcagcatac agcattaaga tcgccatata cagcgcaata aaaaagccat
     2701 caataatacg tatagcgggt gatatgagtt tgcgaataag caacgcctgt cgtttgcgct
     2761 gttacggtca cgatccggcc atcttcgtca aaatcgtagg cataagtggt cgtgttagaa
     2821 tcgctcatgt atgtaaacga tgatgttttt aggagatgcg gacccggccg cagtcccggg
     2881 tacagcatga atgatgaatt ctcaacattt ggtttatcaa aatattcata gctgtttata
     2941 ttgtcgccct gggtgatcgt tgtcaggtct ccattgccat tatattcgta gagagcgcta
     3001 tcggtaaaat tgccaaacgc attttcgctt gtcattacaa tttttatcaa ttggttcttc
     3061 gaattataat aatagtctga gcgaaacctg cccggaatac cttctgccaa ggtgatcaaa
     3121 ctgtcaagca aagacatcga attcaaatag taatacagat gttgcgttgg ctggccgttt
     3181 tggtaaatat cttttctcac taaattattc tgatacgaaa agttcgtata accgctgtct
     3241 gattgaactt ttattatgcg gtcctgggcg tcatacgaaa gagttgatac gatcaaaaag
     3301 tgaaacgagc cactggccgt aatctccgta gtcatggttt tcaccttcag ggaagatggc
     3361 ggaggaggtg gtggtggcgt ggggctgtcc gaattcttag agcaactgtt acataaaaag
     3421 gcggcaaaca gtagctcgaa aatcagtatg cgtttcatgc aggctcagtt ttggatttgt
     3481 ttgatatacg aaattaagga tcgtgggaat tctacgccgg caaaatgcac accgttctaa
     3541 accttgaaag acagcgatcc agcttcctcg tgaacgatac ccactcttgc cgcattgcct
     3601 gttaataggt accaatgcac cgatccatct tgttccaaaa aatgaattcc ttcccatcac
     3661 gagaaaaacc gaaccatgaa cctggatgaa attcaagctc ttaaaacatg gtaccaactt
     3721 tgtctttcgt aaagccgact gcttaaatat tctatgtatg actaccctca tcaagttcga
     3781 acacatttca aaaacagtaa ctgcaaagat tgtcctcaat tacgaggaag ataaaaaaga
     3841 agtaaccgtt gaattctttg gctgtaaaga tgagctcggc gataaattgc tgatcgccga
     3901 gatcgatggc aagtggacca ccgattcgct cattgcaaga aaattccgcg ctacttattt
     3961 agatattttg aacgagatca actggatgtg tacgcacgag tacacggaag taaatgtgat
     4021 cggtgaattt agtgagctca cgcacctcaa ctgattgctc ggggcgaagc ttcggcttct
     4081 aaaactttgg aacccggcat ttgttgcgcc agctttttcc tccgctttgc ggtctaaaat
     4141 aatgttgcaa ggctcaaaaa atatttatat tattgccgtt caccaaaacg cgtacctaaa
     4201 caactgctct tcatcctaat gcggtttttt ctccctgcca tgctgctgct gttcttatgt
     4261 aacaggattt ccggtcaaag ctgcccgcca aatatcgatt ttgaacaggg tgattttacc
     4321 ggttggcaat gttttgtcgg ccaaacctat acactggccg gcagcaacgt tataaacttg
     4381 aaaccatcgc cgccaacacc caacaggcat gaaataattt ctgccgacag caatggtgtt
     4441 ataccgatcg acgcctttgg caagtttcca aagctttgtc cttacggcgg caaattttct
     4501 gtcaagttgg gtaacaccga tgtgggcgca gaggcggagg gcatctcgta cacttttact
     4561 gttccttcaa atgaggactc gttcagcttc acttatttct atgcggtcgt ttttgaaaac
     4621 ccccagcacg cgaaagaaga acaaccacga ttcttcgtga ccgcctttga gacatcaaca
     4681 ggcaatttga tcaactgtgc ctcgtataac tatgtctcaa ctggagggat tccgggtttc
     4741 aaaaaaagtg caagcggagg cgacgtttta tacaaggagt ggtctcccgt gacaatacag
     4801 tttgttggac tcgccaataa acaagtgacc ctcgagttta aaactgcgga ttgtacacag
     4861 ggtggccatt ttggctatgc gtacctggac gtgggctcag gttgttccaa tattcttgct
     4921 acagcgcctt actgtgtaga aacgaattcg ctgctgctta acgcgcctta cgggtttcaa
     4981 tcctacacat ggtataatga agactacacg caggtgctcg gctatgatca aaatctaacg
     5041 ctcagtccgc cgcctgtgca aacaggcaag ttctgggttg acctgcaacc gtacgcaggg
     5101 tatggctgcc gcgatactgc gtatgcagtg gttaccccgt tgccggttcc cgatacgcca
     5161 attgccaaat cagattactt tttttgccaa aatgcgaagg cgcctccttt tcaggcgaca
     5221 ccatcaatca actgcctttt gttatggtat accgatacaa caaaacccgg cgttacggat
     5281 gccatcatgc ctccgacgaa cacgccggga gtcttttatt attatgtatc ccaaaaggta
     5341 cttttcggat gtgaaagctt caggaaaaaa atcagggtac aggttgaccc tgtgccggta
     5401 acctctttca atttagatcg gattttcgcc tgccaggcag gtaattcgtt tacgtgcgta
     5461 agtacatcca ccaatttact aagcccaact tatacctggg actttggaaa tggcgcgaca
     5521 cttagcggcc ctgattcgac tacctacact tacccgagtt acggttcgtt caacatcacg
     5581 ctgcaggtca gaaacggccc ggtttgcagt ttcaacgcaa cgcatcctgt gacggtgggt
     5641 ccaaagccga tcgctgattt tgtttttcct ccgcttatct gtcagaatga aacacccgtt
     5701 tcactcaagg atcaaagtac cgtgccgcaa cagctgtcta caattgcaca atggtattgg
     5761 caggtacagg gaaatgttac cactcagcaa aatcctgcgg gctttattgc gacggctggc
     5821 ggagatattc ctgtattgct tgccgttgca tcgaaggaag gttgcatatc tgatacggca
     5881 aggaaaaatc tcaaagtgcg ttatcaaccg actgcatcgt ttacctacga tgatccgttg
     5941 tgtaataata agatgatcca ttttaccgat ctatctttcc tgccagccgg ggccgttggc
     6001 gaaaacgtca atacatggaa atggaaaatg gacaatgtgc cggttaacgt acagaacccg
     6061 gcgtatcatt ataacagcgg gatacatacc acatcgctca tcgccaccac caattatggt
     6121 tgcaacagca cttcgatatc cagttccctg accgtgcatg aaaagccttt gaccgctctg
     6181 agcataaatg attcgtgcgc atatcgtaag atcatttaca cggcgcagga tgtttcaaag
     6241 actgtacaaa aatggtattg ggattttggg ataggtttca acgaagatag atcagagatc
     6301 atcaaatatt ttttgaatga agggcaaaac tcgttcacgc tgatcggcaa aacggttgac
     6361 ggctgcaccg acacgataca ccggcctttc acgatctata tgaacaaggc ttttgctggc
     6421 aaggatacca tggcggcctt tgaccagcct gtacaactga acgcacatgg cggctcagac
     6481 aaccattata ggtggagtcc cgcgatcgga ttgaacgacc cccatattga aaacccggtt
     6541 gctatttatg acaaggatgt tctgtacagg ctggatgcca tgacaaacga aggatgtgac
     6601 gcgcacagcg caatacttgt taaacggtac aacgggcctg acatctatat tcccaccggg
     6661 tttacaccca acagcgacag gctaaatgat gtgttgcgtg cctttccggt gggcatgaaa
     6721 tcatttgaat actttgcggt atacgcgcgt aacggtgaaa gaatttatta cacgacagat
     6781 tttcataatg ggtgggatgg cacgatccgt tataacccag cgcagtcggg aacatatgtc
     6841 gcagtagcca gggctgtcga ctacaccggt aaagttttct tcaaaaaagt ggctgttgta
     6901 ttgataagat aagaactatg gttaacggtc tgtgctttta actcgagtta caaaaatcct
     6961 tttccagtta gtttgttgat ttttaacggc agaaaaaatc aaaacaactt caactgcggc
     7021 gcaacttttt gcggcggttt cgcgtcgcct gacacggtct ttcctccata cttccatgat
     7081 tcatctctct ccttttgaat gaatgcctca aagtttttgt tgggaataaa atccttttcc
     7141 gcagtcgcgg ctatttgatg cagctttttt atagcttctg atttttcgcc gttaccaagt
     7201 tttgattttt gtaccgccgt ttgcaatgtg cttatcgttt catcataaac tttcgtcgga
     7261 acaggaaaag gatggccgtc ttttcctcca tgcgcaaatg agaaacgggc cggatcattg
     7321 aaacgagatg gcgttccgtg gatcacttcg ctcaccaatg tcaacgattg gatcgttctg
     7381 ggaccaacac cctcgagcaa aagcaatgtt tcaaaatctt ccggcgcacg ttcatgtgca
     7441 agccacagga tgcttccaag tcttttcaga tttacatccg ctgcctgcac gtcgtggtgc
     7501 ggcggcatga tcaactgctg gaattctttc aaaacttgta tcggctcgtc ccgcgcaaaa
     7561 tcgagaatgt gctcacgtgt gggtcgcgct tcctttgcag tcaggtttaa aatttggccc
     7621 tggttgatgc cgcacacacc agtgtgcggt tcttcaacaa acgattggat gttgtctgaa
     7681 tgccaatgat agcgcctggc ggttctgttc gccgtgtcca tgccttgctg cacaacggtc
     7741 catttccctt catcgcttag gatgaaattg tgcatataca actggaagcc atcttgcacc
     7801 gcggtgttat cgacttttgc gctgagcttg ctgctgcgaa ccagttcgtt tccgttcagt
     7861 ccggtgttgc cggcgattgc cagtaattct gaaggagttt cccttgagaa ttttccccta
     7921 ccaccgcaga tgtacaggcc gaggcttttt gaatttggat tgatagattt tttcaaagcc
     7981 cacatcaccg acgttgtgat acccgacgaa tgccagtcca ttcccatcac tgcgccgaaa
     8041 ctctgaaacc aaaaagggtt cgacattctt tggaggaatg catctttgcc gtattcagtg
     8101 aggatcgcct ccgtgatcgc gaagcctagt ttcgccatgc ggtcagcaag ccattttgga
     8161 acagagccat agtgcagcgg aaggtcagcg gagccggagc gtttcataca aagtaaaatt
     8221 aggaagaaga atgcatgtgt gatcgctcat atctcatgag aaatcatgac cgctctgagc
     8281 cgccggcggc ttgcttgaac gatgtttgaa cttgcatttt tttcacaatt tccattgacc
     8341 aggcacgatt gtaacctttt cgtttctcag gtactctata tttctatcaa caaaaacaaa
     8401 tattatggaa gcgattgaat caaataaaag agtacactcg gtgtttaaca ttatgagagt
     8461 gacatacggc atagtgccca tcgtggcagg tttagacaag tttacaaacg tgcttacaga
     8521 ctggacgcat tatcttaatc ctgcaattac atctgcgctg ccgttttcgg cgcagacgtt
     8581 tatgatgatt gtcggtgtga ttgaaattgt cgctggattg atcgttcttc tgaggccggc
     8641 tgttggtgct tacattgtga tggcatggct aatttgtatt gcgttgcaac tcatcgccgg
     8701 taccggatat tttgatgttg ccgtccgtga cctcgtaatg gcaataggag cattttcgct
     8761 ggcgcagatc gcgagaactg cctttgcttc aaagactgaa ctttccaccg ggaaagtggc
     8821 gttttcgtga ggaggtgatt tcgcctgcgg gcagctattt ggatctaaat ttgtgaagtt
     8881 atatcagtga cctcgttgca aaaagacagg tgtgtataac gaccatagca gacacataaa
     8941 tctattatta agaatgatcg taagtgcacc agaaaaaggc attcagcaat attccgacgc
     9001 ggaagtaatt gagcatatca tcgcgggcaa taaagggatg tttgaaatac ttatccgcag
     9061 gtataaccct ttcctctata agacaggccg cggatatggc ttcaaccacc aggacaccga
     9121 agatctcatg caggaaacat ttgtaaacac ttatctcaac ctgaaacagt ttgcaggacg
     9181 cgcttcattt aagacctgga tcataaaaat aatgctcaac gaatgctatc acaaatcgca
     9241 taaatacagt tatcagaaag aacaggcaac agaaatattg ccaggaaatt catcgtttat
     9301 gttttcagac tacaaataca ccgacaatag caggtctctt atcagtaagg aatttaataa
     9361 tattgtcgag gcaacgctgc aaaaacttcc agatgattac agaatgacct ttacgctgcg
     9421 tgagttaacg ggccttagtg ttgcagaaac tgcagacatt atgcaaacta ctgcatcaaa
     9481 tgtaaaggtt cgattgaacc gcgcgaaggc gatgttgcgg aaagaaattg aaaagaccta
     9541 cacaccggaa gatatttatg agttcaacct tatctattgc gaccgcatcg ttgacgccgt
     9601 gatgaaaaga gtttatgagc ttgaagatga gggcggaaat aaataatgaa tgatgagtaa
     9661 tgaataactg gttgctgtaa cttcttccgg gcgtttcagg atattaaggt agccgattac
     9721 aacggcaaac gctgatttta ttccgttatc ttcggtgatt caatatcctg tttatgaaac
     9781 aactgcttgt tttgagcaca gccgtgttcc tgcttaccgg ctgcaaaaaa gattctattt
     9841 acacaaacct cccagcctca cctgcagaga acaacacgca gaattccggt tataaactcg
     9901 cctggagcga tgagtttaat tacaccggct tgcctgatcc tctcaaatgg ggttatgagc
     9961 acggctatgt gcgcaacaac gaaaaacagt attacgagga agcacggttg gaaaacagtg
    10021 aggtgaacaa tggtcttctt atcattaccg cacggaacga caattataac agtcacgcga
    10081 tcacttctgc aagcgttatc actaaggacc ggatgcagtt tttgtacggt aaaattgagg
    10141 tgagcgcaag aatgcctatc ggcgcaggat catggccagc aatatggacc ctcggcgtga
    10201 accgcgagaa agtcgactgg cccaattgcg gagaaataga tatcgccgaa tgggttggca
    10261 gatcaccgcg aattatactt ggcagtatgt atatgccggg aggattgctt ggctatacag
    10321 caaagatcac cacgtatgat gtgggcaaca acacgacgct ctcagcccaa ttccacacat
    10381 acagcatcga gtgggacagc acacagataa aatattttta cgacgggtac aattacgcga
    10441 cctataaagc gtccggcctg actgccaaac aatgggcgcc tttcatgaag ccacaatacc
    10501 tgttgcttga tcttgcaatc ggtggtacaa gtggagggcc agtcgatgac acaaaatttc
    10561 cgttcacata cgaagtggat tatgtgcgat attatcagaa aaaatgatca atgcggaaac
    10621 gagaaaacct tcatgaaaat tttactgaac caatattttc ctcaccgtca agccatcatt
    10681 gatcttcacc tgcaaaagat acattccggc aaccaacgat ccgcggttaa gcttcacttc
    10741 gtgccttcct gctaaaaaat tttgatcaat gatcgtttgc aatatttttc cagacatgtc
    10801 agtaattgaa attcttacag tggaagcatt cgccagcgaa aatgagacgg tggcaaactc
    10861 gactaaagga tttggataaa cttgcaagcc ggctagcgtt gtagacgaga agttttcaac
    10921 agcctgcgca gcgaagcttg tcatgaaggt ttctttcacc gaccattcgg atgacaactt
    10981 ttcgctgcaa acagacctta ccttccattc atattgtgtc cctgaaaata acccggctat
    11041 cgttgtttga ttcgttgtgg tgctgataat agtccagtca gaaaaaccac cggcgatcct
    11101 gtattccacc tcgtagttag taacaccggc aagtgtatcc catttaagcg ttgcgccctc
    11161 ggaacggata tttgttgtcc gcagatctgt cggtatgtta catgacgcac tatcagcggt
    11221 ggtcttcact atccagaaat cattgaagcc ttttgtatcc tctgttttgt cgccactgat
    11281 acctgaagca gagtagccac ctaagatgta tccgccatca tttgtttgtt gtagtccatt
    11341 cagaaattca aattcgcttc cgccaaaatc tgcatcccat tgttttttcc cgtccacatc
    11401 agtcttcacg atccagtaat cagttccacc ctgcgtgggt tgcgttttgt tcccgcttaa
    11461 gggcgaactt gaatagcctc caagtacata acctgcgtcg gcggtttgtt gaatatccgt
    11521 aagataatca ttgctgctgc caccaagatc agcatcccat tgccgcacac ctttcgcatc
    11581 gatctttatg atccagtaat cattatcccc tttactgcgc tgacttttat caccactcgc
    11641 accagaccat gaccagcctc ctaaaatata accgcgatca gttgtttgtc gtagctgtgc
    11701 aagccagtca tcatcgtttc ctccgaatgc ggcgtcccat tttttgttgc cgttttcatc
    11761 tgtctttacg atccacatat caaagcggcc acgattagga tcggtcttat caccattcac
    11821 atccgatagt gaatagccac ccaggatata accaccttca agagtttgcc gtaccgaaaa
    11881 taattcttcg aacaggtcgc cgccaaaatc tgcgtcccat tgttttacgc cgttggcatc
    11941 cgttttcacg atccagaaat cttttccacc ttttgtcggt tgcgttttat ctccgctgat
    12001 gccggacaag gaagaaccgc caagaatgta tccgccgtca acagtttgtt gcagggaatg
    12061 taattcatca gggccggtgc caccaaaagt tgcatcccac tgttttttgc ctttgcgatc
    12121 gattttcacg atccagtaat cactgttacc ccgactcgct tgtgatttat caccgccaat
    12181 acctgaaaag gaggtgcctc ccaaaatata gccgccgtcg cttgtttgct gaagacaggt
    12241 gagttggtca acactggttc ccccgaatcg tgcatcagct tgttttacac cgttggcatt
    12301 tgttttaatg atccagtaat cggagctgcc gcggctttcc tgcgttacat caccgctaat
    12361 acctgattcg gtgtaaccac cagcaatgta acctccgtct ttcgtttgtt ggatcgccgc
    12421 gagttgttca ttttcgcttc caccaaaatc agcatcccat tgtttcgcgg gtgcctggga
    12481 gaatgaatag gaagccgtac ataagaatgc agtaactgca agagtagatc ttagtatcat
    12541 aattcacagg ttt
//
LOCUS       DASQJI010000479         2813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_825473,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000479 DASQJI010000000
VERSION     DASQJI010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825473"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..497
                     /locus_tag="VEV83_13185"
     CDS             129..497
                     /locus_tag="VEV83_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46124.1"
                     /translation="MTKQKIMKTKILLRSVLILAAWFVSANNGTFAESSFHSSTSNSL
                     MKQEPGQTPGKDQTHHHEDRFYIAQPSDDHEIDTFNSKHHEKRSFWKSIANKLFVILY
                     DIIVLSPIAAEVLRELLHHV"
     gene            642..1874
                     /locus_tag="VEV83_13190"
     CDS             642..1874
                     /locus_tag="VEV83_13190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK46125.1"
                     /translation="MQLASFLAKRIAFNNQHSFSRFIIRLATAATALSVAAMIITLAF
                     VNGFQYAVSNKIFNFWGHLRVQEYEPGKAIVAEETPLPPNDTALEILHLFPQVKKVQA
                     FATKSAVVEKNQEIEGVLFKGVEREYDFGNLKPFLKEGRFPTFNDTSYGKEILLSQPI
                     ANELKIKVNDSINVYFINEQAGRASARRLKVCGIFKTGIDEYDKLFAIGDIRLLRRVY
                     NWERDEIGGYEVFLNDPRKMDTVNTQLYEMLPQAWISRTIKQIYPNIFDWLQIQDVNR
                     NVIFIVMSIVAIINLVTCLLILILERTRMVGVLKALGTRDWTIQKIFLYHASIIAGIG
                     VIIGLVAGLGICILQQQTGFIKMNEAAYYVSEAPVHIIWWEVVAVCFATLLVCFLSLI
                     IPTLFVKTIRPVKAIQFR"
     gene            complement(1908..2579)
                     /gene="ung"
                     /locus_tag="VEV83_13195"
     CDS             complement(1908..2579)
                     /gene="ung"
                     /locus_tag="VEV83_13195"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HYK46126.1"
                     /translation="MDVQIEPTWKEVLQNEFSKSYFEEIVAFLRTEKAQGKIIYPPGS
                     LIFNAFDKTPFSKLKVLLLGQDPYHGAGQAMGLSFSVPKGVRPPPSLINIFKELYNDL
                     GVPIANTGDLTPWALQGVMLLNAALTVRAGDPNSHSKIGWHQFTDAVIKKASTEKEGL
                     VFLLWGSFAHQKQELIDQTKHLVLKAAHPSPYSADKGFFGCRHFSKTNEYLVQQKQDP
                     VDWKL"
BASE COUNT          792 a          614 c          602 g          805 t
ORIGIN      
        1 ctacgcatcg tccacaaaaa cgtatttcta cgcatctacg aacatgcttt aaccgcactc
       61 ttacgcaatc ttttttttgc gtggtttcta ccttgatata ggggtattcg gagagacaat
      121 tttggttcat gacaaaacaa aagatcatga aaactaaaat ccttctccgc tcggttttaa
      181 tcctcgctgc atggttcgta tctgctaaca atggaacctt tgctgaatcc agcttccaca
      241 gttctaccag caactcatta atgaaacaag agcctggtca aacacctgga aaagatcaga
      301 cgcatcacca tgaagatcgt ttttacatcg cacaaccgag cgatgaccat gagattgata
      361 cgttcaattc caaacaccat gaaaaacgca gtttctggaa gtcgattgcc aacaaattat
      421 ttgtgatact ctatgacatc attgtgctca gcccaattgc agcggaagtt ttaagagaat
      481 tattgcatca tgtatgagga cggttatgtg gttaactggt ttattagttt atttaggata
      541 ggaattagga tttcacgatt tgacaaattc acattcacaa ttcacaattc atagttcaca
      601 tttgacctcc acgattcacc attcacctac ctttacgctc catgcaactt gcatcattcc
      661 tcgcaaagcg aattgccttt aacaaccagc attctttttc aaggtttatt attcgtcttg
      721 ccacggcggc caccgctttg agtgttgcag cgatgatcat cacccttgca tttgtgaacg
      781 ggttccagta tgcggttagt aataaaatat tcaatttctg gggacacttg cgcgtgcagg
      841 aatatgaacc cggtaaggct atagttgccg aagaaacacc gctgccgcca aatgacacag
      901 ctcttgagat attgcatctc tttccgcagg taaaaaaagt gcaggcattc gctacaaaat
      961 cggctgtggt ggaaaagaac caggaaatag aaggggtatt atttaaagga gtggaacggg
     1021 agtatgactt tggtaacctg aaacctttcc tgaaagaagg gcgctttcct acatttaacg
     1081 acacatccta cggcaaagaa atactgcttt ctcaaccgat agcaaatgaa ttaaaaataa
     1141 aggtgaatga ctctatcaac gtttatttta ttaacgagca ggcaggcaga gcctctgcgc
     1201 gtcggttgaa agtttgtggg atttttaaaa cggggattga tgaatacgac aaattatttg
     1261 cgatcggcga catacgcttg ctccgccgcg tgtacaattg ggagcgcgat gaaattggcg
     1321 gctatgaagt tttcctgaac gatccccgaa aaatggatac cgtgaatacg cagttatacg
     1381 agatgcttcc acaggcatgg ataagtcgca cgatcaaaca gatctatcca aacattttcg
     1441 actggcttca aatacaggat gtgaaccgca acgttatatt tattgtgatg tcgatcgtcg
     1501 ccatcatcaa cctggtgaca tgtttgctga tattaattct tgaaagaaca agaatggttg
     1561 gcgttttaaa agcactcggc acccgcgact ggacgatcca gaaaattttt ctttatcacg
     1621 cgtcgatcat tgccggtatc ggtgttatca tcgggctggt tgccggactt ggtatttgca
     1681 ttttacagca acaaacgggc ttcatcaaaa tgaatgaagc tgcatattac gtttcagaag
     1741 caccggtaca tatcatctgg tgggaggtcg ttgctgtctg ttttgcgacg ctgctcgttt
     1801 gttttctctc cctcatcata ccaacgcttt tcgtaaaaac aatccgcccc gttaaagcca
     1861 ttcaattcag gtaacctcgc aatttgaaac cgcagacatc gaacttgcta cagcttccaa
     1921 tcaacggggt cttgtttttg ctgaacaaga tattcatttg ttttgctgaa atgcctgcat
     1981 ccgaaaaaac ctttatcagc gctatacggc gacggatgtg ctgcctttaa taccagatgt
     2041 tttgtttgat cgatgagttc ctgtttttga tgagcaaagc ttccccagag caaaaacacg
     2101 aggccctctt tttccgttga tgcttttttt atcacggcgt cagtgaactg gtgccagcca
     2161 atctttgaat gagaattagg atcacctgcc ctcaccgtga gcgcagcatt cagcagcatc
     2221 acaccctgca atgcccacgg cgtaagatcg cccgtattcg caattggaac accaagatca
     2281 ttataaagct ctttaaaaat attaatgagc gaaggtggcg gtcttacccc ttttggaaca
     2341 gagaaagata agcccatcgc ctgtccggca ccatggtagg gatcctgtcc caaaagcaaa
     2401 accttcagct tactgaaagg cgttttgtcg aacgcattaa aaatgagtga gccgggcgga
     2461 tatattattt taccctgggc tttttcagtt cttagaaagg caactatttc ttcgaaatat
     2521 gatttagaga attcattttg cagtacttct ttccaggttg gttctatctg aacatccatg
     2581 aagcaggttt ggctgcaaac taattaaaaa ttatttttgc ccggtttaac gtgtgatgat
     2641 tgaggtctga cgttgacctt tgaagttgaa tggcaaaatc tgaaatcgta aatctgaaat
     2701 cgtaaatggt cacggtccgg tagctcagtt gaatagagca tcccgattct gatcgggagg
     2761 gtcaggggat gaacgaagtt cttaaaggga gtcattaatt ggtccggtag ctc
//
LOCUS       DASQJI010000480         4029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1592102,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000480 DASQJI010000000
VERSION     DASQJI010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1592102"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..3210
                     /locus_tag="VEV83_13200"
     CDS             286..3210
                     /locus_tag="VEV83_13200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK46127.1"
                     /translation="MNLRRLFLSFVMPLLCLSAWAQRTVTGVVTDSASKAPLGSVTIL
                     VKGTGTGTQTTSNGSFTINVPANASTLVISSVGYGTKEVIIGNGPMNISLGQASSSLT
                     DVVVIGYGTSRKKDLTGSIATVGQKDFQKGSITTAEQLISGKVAGVQITSNGGQPGSG
                     SVIRIRGVSSLSSSQDPLIVIDGVPLENGSISGSANALSLINPNDIESFTVLKDASAA
                     AIYGSRASGGVILITTKKGRGGGKLNVSFSTVNSIAVKSNTVDVLSADEFTRLVNEIG
                     TDAQKALLGTSNTNWQEEIYHPAFSTDNLISLSGGIKQLPYRLSLGYLDQDGILRTDN
                     LKRTSGALSLTPTFLDNHLKVSVNLKGTIEKFFFANQGAIGSAVFFDPTQPVLDADSK
                     YGGYFEWLDASGNPNSLAPKNPVGILNQNDNTSNVKRSIGNIVLDYKFHFLPELRANL
                     NAGYDVSHGEGSQTIPETAGSVAVQGGFANSYEQKRRNKTFEFYLNYAKDLSSIKSRI
                     DATAGYGYYDFWHAAPANYNLNLKGDTLKTNSADSSQNTLLSYYGRVNYSYNDLILLT
                     ATVRRDGSSRFAPDTRWGTFPSAALAVNLIKNSAGPLNSLKLRLGYGETGQRDIGLDY
                     PYIPRYTLSNPQAQYQLGDQFYYTYRPEPFNQDLKWETTITYNGGFDFAMFKGRLNAS
                     IDVYKKKTKDLLLYSPLPAGSNLSNQFFINVGNMENKGVEFTISGSPIKGPELNWNAS
                     FNLTYNKNEITNLTQAPDPTNKGIDVGGIAGGVGNYIQKYAVGYPANSFYVYKQVYDS
                     AGNPIEGLYADNNRDGVINSDDKYFYKSPYPVVYMGFTSELDYKEFTLSFVLRANIGN
                     YMFNNVAANSGYYTNIFSSNPFLNNASSDVLVTNFQRPQYWSDYYIQNASFLRMDNLN
                     IGYNFGKVIDKTVNLRAGFTIQNVFVITKYKGLDPEIFSGIDNNFYPRPRIFSLGLNL
                     DF"
     gene            3232..>4029
                     /locus_tag="VEV83_13205"
     CDS             3232..>4029
                     /locus_tag="VEV83_13205"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK46128.1"
                     /translation="MKTYIKWTFLTVLAATVFVACNKDLDREPLTGTTAQDVYNTPAN
                     YKAVLAKIYAGLAVSGQQGPAGNPDITGYDEGFSNYLRQYWQMEELTTDEAVIGWGDA
                     DIQDLHNMNWTTSNTFVRMIYNRLYYQISLCNEFIRESSDDVVAGKGFSSTDADNIKQ
                     YRAEARFMRALSYWHAMDLFGNVPFVTENDPVGSFIPPQISRDSLFQYVESELLDVEQ
                     TLAEPRTNEYARADKAADWMVLAKLYLNAEVYTGTARYADCINYCNKI"
BASE COUNT         1225 a          781 c          892 g         1131 t
ORIGIN      
        1 atgaagtgga atattaactc agaaataatc aattcaaaaa aattctctcg aaaaattttt
       61 ttatgaagtg tgaaaattac acatttgcac tttattgcgt aaaatttaca cattttaact
      121 gaacggtgaa ttgcttagtg aacatgattg cttcccattt tttcacaagg ccagcagcaa
      181 atgatacttc ttcgttgtca attttattga cgtttttagc cttgccatta caaatcactt
      241 tttcaaattt gaataactac taattctcaa catcaaatta tcattatgaa cctgagacga
      301 ctgtttttga gctttgtgat gccacttttg tgcctttcag cgtgggcgca gcgaactgtt
      361 accggtgttg tgactgattc tgcgagtaag gcgccgctag gctcggtaac gattttggta
      421 aagggcaccg gcaccggaac ccaaaccaca agtaacggca gcttcactat taatgtgccg
      481 gcgaatgctt ctacacttgt gatttcctcg gttggatatg gaaccaaaga ggtgatcata
      541 ggtaatgggc caatgaatat ttcgctggga caagcgagtt caagcctgac cgatgtagtg
      601 gttatcggtt atggtaccag cagaaagaag gatcttaccg gttctattgc gactgtaggc
      661 cagaaagatt ttcagaaagg tagcatcacc actgccgagc aactgatcag tggaaaagta
      721 gcaggagttc aaattacttc aaatggcgga cagcctggtt cgggcagtgt tattcgtatc
      781 cgtggcgtgt cttcgttatc atccagccag gatccattga tagtgattga tggggtgccg
      841 ttagaaaatg gtagtataag cggaagcgcg aatgcattga gccttatcaa cccaaacgat
      901 attgaatctt ttactgttct aaaggacgcg tcggctgccg ctatctatgg ctccagagct
      961 tccggaggcg taatcttaat tacgactaaa aaaggaaggg gtggtggcaa gctaaatgtt
     1021 agcttcagca cggtaaattc gattgcagta aagagtaata ctgtagacgt gctttcggca
     1081 gacgagttta caagattggt taacgagata ggcacagacg cacaaaaagc gttattaggt
     1141 acgtcaaata caaattggca ggaagaaata tatcatcccg cgttttcgac tgataatctc
     1201 attagcttga gcggaggtat aaaacaactg ccttatcgtt tgtccctggg atatttggac
     1261 caggacggta ttttaagaac tgataatttg aaaagaacat caggcgcttt atcgctcacg
     1321 ccaacctttt tggataatca tttaaaagtg agcgtgaatt taaagggtac aatagaaaaa
     1381 ttcttttttg caaaccaggg cgctattggt agcgcagtat tttttgatcc aacgcaaccg
     1441 gttcttgatg cagacagcaa atatggtgga tattttgaat ggctcgatgc aagcggtaac
     1501 ccaaactcac tagctccaaa aaatccggtt ggcatactta atcaaaacga caatacaagt
     1561 aatgtgaaaa gaagcattgg taacatcgtg cttgattata aatttcattt tttgccggaa
     1621 ctgcgcgcca atcttaatgc aggatacgac gtttcgcatg gtgaaggcag tcaaacgata
     1681 ccagaaactg cgggttctgt tgccgtacaa ggcggtttcg caaattccta tgaacaaaaa
     1741 aggagaaata aaacatttga attttatctc aactacgcaa aagatctttc ttctattaaa
     1801 agccgtatag acgcaacggc cggttatggg tattatgatt tttggcacgc ggctcctgct
     1861 aattacaatc taaatctaaa gggtgatact ttaaagacaa atagcgcaga ttcttctcag
     1921 aatacgctgc tttcctatta cggcagagta aattatagtt ataacgattt gatattattg
     1981 acggctacag ttcgccgcga cggatcatca cgatttgcgc ccgatacacg ctggggaact
     2041 tttccatcgg cggctttagc agttaatctc ataaaaaaca gtgcaggtcc ccttaacagc
     2101 ctgaagttgc gtttgggcta tggcgaaaca gggcagcgcg acattggtct tgactatcct
     2161 tacataccca ggtatacctt aagcaatccg caggcccagt atcagttagg tgatcaattt
     2221 tattatacgt acaggccaga accgttcaac caggatctga aatgggaaac aactatcaca
     2281 tataatggcg ggtttgactt tgcaatgttc aaaggaaggc tgaatgccag catagatgtg
     2341 tataagaaaa aaaccaaaga tctcctctta tacagcccat tgccagcagg ttcaaatcta
     2401 agcaaccagt tttttatcaa cgttggtaat atggaaaaca aaggcgttga atttactata
     2461 agtggatctc caataaaagg gcccgaatta aattggaacg cttccttcaa tctgacatac
     2521 aacaaaaatg aaattaccaa tctcacccag gctcctgatc caactaataa aggaattgac
     2581 gttggtggta tcgcaggcgg cgttggaaat tatatacaga aatatgcagt gggttacccc
     2641 gcaaattcat tttatgtata taagcaggtg tatgacagtg ccggcaaccc gatcgaagga
     2701 ttatatgcag ataataaccg tgacggggtg atcaatagcg acgataaata tttttataag
     2761 tcgccctacc cggtggtcta catgggcttt acatcggagc ttgactacaa agaattcact
     2821 cttagctttg tgctaagagc gaatattggc aactacatgt ttaacaacgt ggcggccaat
     2881 tccggatatt acactaatat tttcagttca aatccgtttt tgaacaatgc atcgtctgat
     2941 gttttagtca ccaatttcca aaggccacaa tattggtcag attactacat tcagaatgca
     3001 tcatttttac gaatggataa cctgaatatt ggttataatt tcggaaaagt tattgataag
     3061 acggtcaatt tgagagccgg atttactata caaaatgtgt ttgtcattac aaagtataag
     3121 ggcctggatc cggaaatttt cagcggtatc gataataact tttatccaag acccaggatc
     3181 ttttctctcg ggctaaatct tgatttttaa tattcattct aacaagaaga catgaaaaca
     3241 tatattaagt ggacgtttct cactgtactg gcggctacag tgtttgttgc atgcaacaaa
     3301 gatcttgatc gcgagccttt aacgggcacc actgcgcagg atgtatacaa tacgcctgca
     3361 aattataagg ccgtgttagc aaaaatttat gcggggttgg cagtaagcgg tcagcaaggt
     3421 ccggctggta atcctgatat tacaggatat gatgaagggt tttctaatta tctccgccaa
     3481 tactggcaga tggaagagct caccacagat gaagctgtaa ttggatgggg agatgcagac
     3541 atacaggatc ttcataacat gaactggaca acaagtaaca catttgtcag gatgatttat
     3601 aaccgccttt attatcaaat aagcctgtgt aatgaattta tccgggaaag cagtgatgac
     3661 gttgttgcgg gtaagggctt ttcatcaacg gacgcggaca atataaaaca atatcgcgct
     3721 gaagcaaggt tcatgcgtgc tttaagctat tggcatgcca tggatctttt cggtaatgta
     3781 ccgtttgtaa cggaaaacga ccccgttggt agctttattc ctccgcagat ctccagagat
     3841 agcttgtttc agtatgtgga atctgaactg ctagatgttg aacaaacgct tgctgaacca
     3901 agaacaaatg aatatgcgcg ggccgataag gcggcggact ggatggtgtt ggcgaaattg
     3961 tatttaaatg ccgaagttta tacgggaaca gcccgttatg cagactgtat taactattgc
     4021 aataaaata
//
LOCUS       DASQJI010000481         3071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2054716,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000481 DASQJI010000000
VERSION     DASQJI010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054716"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VEV83_13210"
     CDS             complement(<1..669)
                     /locus_tag="VEV83_13210"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HYK46129.1"
                     /translation="MPSRNVRSRLVELGNSGYEIVADEPDIRKWKVTNADRKLLGVVD
                     ELLVDRELHKVRYIVLGLQGKPLNLLSRKVLIPIGIAELDQVDDLVVLPSITLEHLAT
                     LPTYRKGKLNLESERKIRAVFSPAAAAMDADDDVFYEHEQFSDRGLHNRKKKLESSRR
                     DNVVYKDDPVFDRRPNEEFRPFKEGTVEVTEKSEVPVVTKEPRIVEEVSVNKQVRERD
                     ATVQD"
     gene            complement(690..875)
                     /locus_tag="VEV83_13215"
     CDS             complement(690..875)
                     /locus_tag="VEV83_13215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46130.1"
                     /translation="MAQLHVQKKRGQLWWLWIIVLLIIIGVVYYFLVRNNMVPDPLGI
                     NRQTTSLIHANENMHVI"
     gene            complement(936..1874)
                     /locus_tag="VEV83_13220"
     CDS             complement(936..1874)
                     /locus_tag="VEV83_13220"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HYK46131.1"
                     /translation="MSQTVVGIFNNADDARHAVSKLLDNGFNESNVDYARGPESEEYL
                     QDANYREETRTEHESGIGRFFRNLFGNDDESDRYTRVAKRGCIVTVHAESTDEARRAT
                     ELLDECGAVDVDEKDMAYGETAREYNAEKDREYVAERDREYNAEKDRMVNREEDGEYT
                     PRKDREFTTEHPNVPDEKYFDTARNETKKIPVVEETLNVGKKVVEKGGVRVHSRIVEK
                     PVEKTVRLREEHVYVERNKVDKPVTDSDLNEFKEGTIDVREHAEVPVVTKDTNVVEEV
                     SVNKTVGEREETIRDNVRRKEVDVEDVDTGRKKTNL"
     gene            complement(1897..2292)
                     /locus_tag="VEV83_13225"
     CDS             complement(1897..2292)
                     /locus_tag="VEV83_13225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HYK46132.1"
                     /translation="MKRKNEKTIPVVEEQVHVDKKIIESGKVYVHKKVREENEDISVP
                     VAHEEVEVRKVAVNRYVDAAPPVRYEGNTTIVPVIKEVAVIEKRLVLVEEVHITKHVV
                     EETHEHTVPLRKEEVEVEHYTRNPAKDLP"
     gene            2547..>3071
                     /locus_tag="VEV83_13230"
     CDS             2547..>3071
                     /locus_tag="VEV83_13230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46133.1"
                     /translation="MNIDLQQLEIQVNLHAMQPDFRDLELHYVIAENENTFRFAGRDE
                     LPNAKEKKFYCFLQEKTMTIPAGNIVLKESYVLTEKPIYPLIFDCKDLMSIMSTVKTN
                     KPAKAVRAFSAEQLELIKDCLAKEFTKVETHIVASPNLQHHIFVVDNIEISVSPTMVY
                     LRAKAPFSESHYKSA"
BASE COUNT          725 a          756 c          607 g          983 t
ORIGIN      
        1 atcctgtaca gttgcatcgc gttcacgtac ctgcttattt actgatactt cttccacaat
       61 tcttggctcc tttgttacaa caggcacttc cgatttttca gtgacttcaa ctgtaccctc
      121 tttgaaaggt ctgaattctt cattcgggcg acgatcaaac accgggtcat ccttatatac
      181 tacattgtct ctgcgacttg actcaagttt ttttttacgg ttgtgcaagc ctcgatcgct
      241 aaactgttcg tgctcataaa aaacgtcgtc gtcggcatcc atggcggcag ctgcaggaga
      301 aaacacggcc ctgatctttc gctctgattc gaggtttagt ttgccttttc tgtacgtagg
      361 tagtgttgcg agatgttcca acgttatcga gggtaaaacg acgaggtcat ccacctggtc
      421 cagttcagca ataccgattg gtattaatac tttccgggaa agaagattga gcggtttgcc
      481 ctgcaaaccg agaactatat atcgtacttt atgaagttcg cggtctacga gcaactcgtc
      541 tacaacgcct aaaagtttcc tgtcggcgtt tgttactttc catttccgga tgtcgggctc
      601 gtcggcaaca atttcgtaac cgctattacc aagctctacc agcctggagc gaacgtttct
      661 acttggcatg atcaaatgtt tttaatgaat taaataacat gcatgttttc atttgcatga
      721 atcaacgatg tagtttgcct gttgatcccg agtgggtcgg gaaccatgtt gttgcgaacc
      781 aggaaatagt agaccacccc gataattatc aacaagacga ttatccagag ccaccacaac
      841 tggcctcgtt ttttctgaac atgtaactgt gccattgtta tcttattttg tgaaagaaaa
      901 gagcagcata gtttcctaag ctgccctgtt tgtttttaca aattcgtttt ttttcttccc
      961 gtatctacgt cttccacatc aacttctttt cggcgcacat tgtcccgaat cgtctcttcc
     1021 cgttcgccca ctgtcttgtt cacggaaacc tcttcaacca cattcgtgtc tttggtaacg
     1081 accggcactt cggcgtgttc cctcacatcg atcgttcctt ctttaaattc attcaagtcg
     1141 gaatcggtta ccggcttgtc aactttgttt cgttcaacgt aaacatgctc ttcgcgtaaa
     1201 cggaccgttt tttccactgg tttctcaaca atcctgctgt gaaccctcac gccgcctttc
     1261 tccacaacct tcttgcctac attcaacgtt tcctctacca ctggtatttt tttggtctca
     1321 ttgcgggcag tgtcaaaata tttttcgtcg ggaacgttcg gatgttcggt ggtgaattca
     1381 cgatcctttc tcggggtata ttctccgtcc tcttccctgt taaccatccg gtctttttcc
     1441 gcattatatt ccctgtcccg ttcggcaaca tactccctgt ctttttcagc attgtattcg
     1501 cgcgcagttt caccatacgc catgtctttt tcatccacat caacagcgcc gcattcgtcg
     1561 agcagttcag tagccctgcg tgcttcgtca gttgactcag cgtggacggt tacgatgcaa
     1621 cctctttttg ctactcttgt gtagcggtca ctttcatcat cgttaccaaa aagatttctg
     1681 aaaaaccggc caattccact ttcatgttca gtgcgcgttt cctcgcgata atttgcgtcc
     1741 tgcaaatatt cctcagattc aggaccgcgg gcgtaatcaa cattgctttc gttgaacccg
     1801 ttatcaagta atttactgac agcatgcctt gcatcgtcag cattattgaa tattcctaca
     1861 accgtttgtg acatacgacc tcctttttat tttttgttat ggtaaatctt tagcggggtt
     1921 ccgggtgtaa tgctctactt ccacctcttc tttacgcagg ggtacggtat gttcgtgtgt
     1981 ttcttctaca acatgttttg ttatatgcac ctcttctaca aggaccaatc ttttttcaat
     2041 gacagcaact tctttgataa cgggaacgat ggttgtgttt ccttcatacc ttaccggcgg
     2101 agcagcatcc acgtatcggt tcacggctac cttcctaacc tctacttctt cgtgagccac
     2161 aggcacgctg atgtcctcgt tctcttcccg cacttttttg tgaacataca ctttgccgct
     2221 ctcgataatc tttttatcaa catgaacttg ctcctcaacg accggaattg ttttttcgtt
     2281 ctttcttttc atagcggctg tttgcagaat cttttattct ttcactcaaa ccgtgccact
     2341 attgcgcagt atggataagg aaaaagtgaa aaccggcgtt gttcgtgttt ttccacagaa
     2401 aaggattttc ttctacacct tgccggccgg caaattggac acccggatgt gcgccctttt
     2461 tggaagcagc ttttgatttt actccacaag caaataatgc gcagaagatt tgcaggagaa
     2521 ttaattttga ggttcaattg cttcctatga atatcgatct gcaacaacta gagatccagg
     2581 tcaatttgca cgcgatgcag ccagatttca gagatctgga gctgcattac gtgatcgccg
     2641 aaaacgaaaa tacatttcgg tttgctggcc gcgacgaatt gccaaatgcc aaagagaaaa
     2701 agttttattg ctttttacag gagaagacca tgacaattcc tgcaggcaac attgtattaa
     2761 aagaaagcta tgttttgacc gaaaagccta tatacccgct gatatttgat tgcaaagatt
     2821 taatgtcaat catgagtacg gtaaaaacaa acaagcctgc aaaagctgtt cgggcatttt
     2881 cggctgaaca gctcgagttg ataaaggatt gtcttgcgaa agaattcacg aaggtggaaa
     2941 cgcacattgt tgcaagcccc aatctgcaac atcatatttt cgttgtagat aatattgaga
     3001 tatctgtttc tcctacaatg gtgtacctgc gtgcaaaggc gccgttctcc gaaagtcatt
     3061 acaaaagtgc g
//
LOCUS       DASQJI010000482         8915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2668518,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000482 DASQJI010000000
VERSION     DASQJI010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8915
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2668518"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VEV83_13235"
     CDS             complement(<1..701)
                     /locus_tag="VEV83_13235"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK46134.1"
                     /translation="MKKYVFFLLPLIFFGGCKNITRPFNSNLAADSKDVNAARSAHPN
                     IILIVGDDIGYEVLSCNGGQSYQTPFLDDIAANGVRYTECHACPLCSPSRVSLLTGKY
                     NFRNYTAWGYLDPASNKTIGNMLQDQGYATCYAGKWQLSGYDPSIHALGWQKYSVWDP
                     GDPLIAGSRYKNPHIYQDGNFLPDTATVNKYGEDMFVDYISSFMDTATKPYFIYYAMT
                     LAHAPFSPTPDDAEFA"
     gene            948..2636
                     /gene="ftcD"
                     /locus_tag="VEV83_13240"
     CDS             948..2636
                     /gene="ftcD"
                     /locus_tag="VEV83_13240"
                     /EC_number="2.1.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR02024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030409 - glutamate formimidoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030412 - formimidoyltetrahydrofolate
                     cyclodeaminase activity [Evidence IEA];
                     GO_process: GO:0019556 - histidine catabolic process to
                     glutamate and formamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate formimidoyltransferase"
                     /protein_id="HYK46135.1"
                     /translation="MQQIIECVPNFSEGNDLNIIRQITNEIESVDGVRLLNVDPGKAT
                     NRTVVTFVGNPQAVVIAAFKAIKKAGELIDMSKHKGEHPRMGATDVCPLIPVSNISME
                     ETADYARQLAERVGNELKIPVYLYECAQPNKERCNLSVIRAGEYEGFFKKIKLPEWQP
                     DFGPAEFDAKRGATVIGARDFLIAYNVNLNTTSVRRANSIAFDVREGGRVKREGNPIT
                     GKIVRDENGNAVAIPGSLKSVKAIGWYIEEYGIAQISMNLTNINVTPMHIAFDEVCTK
                     ANERGIRVTGSELVGLVPLKSMVDAGKYFLRKQKRSTGVSEKELIRIAILSMGLDELA
                     PFKPEERIIEYLLKNNADSKLVSMSLTDFADETASESPAPGGGSIAAYAGVLGASLAT
                     MVANLSSHKKGWDDRWEEFSDWAEKGQQYKNELMQLVDADTRAFNQIMNAFALPKSTD
                     AEKQLRSSAIQEATKGAIEVPFRVMHVAYASMEVIKAMAEIGNPNSVSDAGVGALCAR
                     AAVVGAFLNVRINAGGCDDKSFVDKIISKGREMERNAVQFETEILRIVNEKIGE"
     gene            2920..3645
                     /locus_tag="VEV83_13245"
     CDS             2920..3645
                     /locus_tag="VEV83_13245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK46136.1"
                     /translation="MTPKIKTGLVFILLLSISCTKENDVSDPAVIDNYSNSAFISGQN
                     DFNKFAAVSIGTQKWMTKNLDVNHYRNGDKIPQVTVPGKWDTLTTGAWCWFKNDSANG
                     AVYGRLYNWYAVNDPRGLAPSGWHVPTDREWTTLSNFLGKNAGGKLKDTGTIDAGAGL
                     WWAPNKGATNSTGFTGLPGGYRSGDDGMFGQLGGQGHWWSSTEYQTFQAWYRVLSYNY
                     AIIYRSHQTATRRYGFSVRCIKD"
     gene            3868..5424
                     /locus_tag="VEV83_13250"
     CDS             3868..5424
                     /locus_tag="VEV83_13250"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46137.1"
                     /translation="MKTILFSILCALVTTLGNAQAGTLDTTFGKGGGVITDFRTSAGA
                     KDEVIQPDGKIVVVGISENKFSIARYLVNGELDPSFGKHGRMLTAIPGHDICIANAVA
                     LQSDGKILVAGTAGDDFAVVRYNPGGAIDTSFGTGGGTVTDFRHGEDAATDMVIQPDG
                     KILVSGYTFTSYGNFALARYQPNGVLDSNFGKDGKIVTTIRRDDRSQCMALQPDGKII
                     LAGDADWNFGMVRYKKSGDLDSSFGSNGRVLTKMVRDNIFCFAIAIQPDGKIILGGRA
                     FNGPGPIIARYKMNGELDSTFGVNGFVKKIEGGVHKIYSLRIQPDGKILAAGAQGIQG
                     SVTGYDYTLLRYLPTGRLDTTFGTNGQADPVDFNKKDDDAYAMALQSDGKIVLAGTAT
                     IRIIKDGTYYYYTEYGVVRFNNDIGNVDKKQYRSLPVAQSSIYEENKVVLYPNPVRDV
                     LNIRGLDQFTNYDLRITNAKGSVVARDRNAQSGLNGIYTMQAQSLSSGLYYSTITSPN
                     KKTTVKFVKE"
     gene            complement(5474..6511)
                     /locus_tag="VEV83_13255"
     CDS             complement(5474..6511)
                     /locus_tag="VEV83_13255"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46138.1"
                     /translation="MNDNISYTSTTIEIVRITSDGTLDWYTTFDSQQSSTDIYNPKCI
                     VEANNEFLIGGNINYQWLYYTDGALLRLNSKGKVLAFKRISSHYLFLTLSKLWIANNM
                     LCAFGEFEGEYGYYKKCFFYFKDTSGQIHGDVVHNNVFSVQHYLELHKYLLPADLSGA
                     YYEKNGSYINVAGNGYNYEISKFDSLGRICPDFALPKYDPLFHSKLFTTSDKSYAVYT
                     DSVYLEDAEVSESRVAEEAIICRGSANENPNPIKLDNQRVNVDGSKPMLFPNPARDII
                     TLKYSSTSFQEVYVAITTSDGITMQSAKLLLNPGINMQPIGIESLSSGLYLLRIKEHD
                     KLTVLKFIKSN"
     gene            complement(7373..8896)
                     /locus_tag="VEV83_13260"
     CDS             complement(7373..8896)
                     /locus_tag="VEV83_13260"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46139.1"
                     /translation="MKNATLLFVICMLLSATSFEQAGTLDSSFGDNGKIITRISGYCV
                     ASAVAIQPDGKIVVAGTCGHDFLVLRYKKSGFLDKTFGDQGIVLTDFDGNAGGTSMVL
                     QSDGKIIVAGSAWNSNNVDFALARYQQDGSLDSSFGNDGKVVTDFGLSEGGNSVLLQA
                     DGKIVLAGTSVYGPGENFALVRYKKNGRVDSSFGTNGEVITNVSGSDNHLNAAALQAN
                     GKIVVAGSVYTRYSDHPQIYFALARYTDNGNLDDSFGDSGKVITDFGGDAQAFSVAIQ
                     SDGKIVAAGSYTKKVGVALARYGQDGRLDNSFGTHGKVITIFAVGCDVNSVAIQTDGK
                     ILTAGAYYQAFALLRYKQNGIIDSTFGGDGLVTTSFSDVFPSMANDLAIQNNGKIVVV
                     GNVSYDFSFIAIARYNGDNTSTPINSIGVSNAQKNKNVMANILLSPNPVQDILRIDGL
                     SSFTKTISIIDAKGKLLKQETTANDNYSFNTKQLSAGIYLVRIAAGHAATTLKFLKE"
BASE COUNT         2639 a         1817 c         1983 g         2476 t
ORIGIN      
        1 gcaaattcag cgtcatccgg cgtaggcgaa aaaggagcgt gggcaagcgt cattgcataa
       61 taaatgaagt atggttttgt cgctgtgtcc atgaatgaac tgatgtaatc aacaaacata
      121 tcttctccat atttattcac ggtcgctgta tctggcagga aatttccgtc ctggtaaatg
      181 tgcggattct tatacctcga accggcaatc aacggatctc cggggtccca gacagaatat
      241 ttttgccaac ctaaagcatg tatggaagga tcgtagccac tcaattgcca ttttcctgca
      301 taacaggttg catagccctg gtcctgcaac atatttccaa tggttttgtt tgaagccggg
      361 tccaggtaac cccacgcggt atagttccga aaattatatt ttcccgtcag cagtgaaact
      421 cgtgagggcg aacacagcgg gcaggcgtgg cattcagtat atcttactcc gttcgcggca
      481 atatcatcca ggaagggagt ttgatatgat tgaccgccat tacagctcaa cacttcgtag
      541 ccaatatcat caccgacgat caaaatgata tttgggtgag ccgaccgtgc agcattgacg
      601 tctttactat ccgcggcgag gttcgaatta aaaggacgcg ttatattctt acatccgcca
      661 aaaaaaatta atggcagcag aaaaaaaaca tactttttca tgtgggtggg cctaagattt
      721 aaagagttta gataacggca aaaagagtct cagccttggc aaaaataaga acgaaaatta
      781 aaaattccct accggaattc gttttttaag cagatctcct tttttccgcg atgagatgcg
      841 attttcagtt accgaaaacc gccggccggt tgaataaagg tgttaaggct attcgcttat
      901 cttcaccttt tatcatccga aaattttcct gcaccgaatc atagtttatg cagcaaataa
      961 tagagtgtgt tccaaatttc agcgaaggaa atgatttaaa tatcatccgc cagatcacaa
     1021 atgaaatcga atctgtcgat ggtgtccgtt tgctgaatgt tgatccgggt aaagccacca
     1081 atcgcacggt tgtgactttt gtcgggaatc cgcaggctgt tgtgattgct gcttttaaag
     1141 caataaaaaa agcgggtgaa ttgatcgaca tgagcaaaca caaaggtgaa catccgcgca
     1201 tgggtgcaac cgatgtttgt ccgctcatcc ctgtttccaa tatttcaatg gaagaaaccg
     1261 cagactatgc gaggcagtta gcagagcgcg taggaaatga attaaagatt cccgtctatt
     1321 tatacgaatg tgcgcagcca aataaagagc ggtgtaattt atcggtgata cgggccggtg
     1381 aatacgaagg cttctttaaa aaaataaagt tgcccgaatg gcaacctgat tttggtccgg
     1441 cagaatttga cgcaaaacgc ggcgcgaccg taattggcgc gagagatttt ttgatcgcgt
     1501 ataatgttaa cctgaatacg acctcagtgc gccgcgcaaa ttctatcgcg ttcgatgtgc
     1561 gtgaaggagg cagagtaaaa cgtgaaggaa atccgatcac aggcaagatc gtaagagatg
     1621 agaatggaaa tgcggttgca attcccggca gcctgaaatc tgtgaaggcg atcggttggt
     1681 atatcgaaga atatggaatt gcgcagatct cgatgaacct tacaaatatt aatgttaccc
     1741 cgatgcatat tgcgttcgat gaagtttgta caaaggcgaa cgaacgtggc attcgtgtta
     1801 ccggtagtga gttggtggga ttggttcctt tgaagtcgat ggtagatgcg ggaaaatatt
     1861 ttcttcgaaa acaaaaacgc tcgacggggg tatcggaaaa agaacttata cgcatcgcca
     1921 ttctttcgat gggacttgat gaactcgcac ccttcaaacc ggaagaaagg atcattgaat
     1981 acctgctgaa aaataatgca gacagtaaac tggtcagcat gagcttgact gatttcgccg
     2041 acgaaactgc gagtgaaagt ccggcgcccg gcggtggctc catcgctgct tatgcgggtg
     2101 tgttgggtgc gtcgcttgcc acgatggttg ccaatctttc atcacacaaa aaaggatggg
     2161 atgacagatg ggaagagttc agcgattggg ccgaaaaggg acagcagtat aaaaatgaat
     2221 taatgcaatt ggtagatgca gacacgcggg cattcaacca gatcatgaat gcatttgcgc
     2281 ttccaaaatc caccgatgcc gaaaagcagt tgcgatcaag tgcgatacag gaagcgacaa
     2341 aaggtgcgat cgaagttccg ttccgcgtga tgcacgttgc ttatgccagt atggaagtga
     2401 taaaagcgat ggcggaaatt ggtaacccaa attctgtgtc cgatgccggt gtaggagctt
     2461 tgtgtgcgag agccgctgtg gtgggtgcat ttttgaatgt gcgcatcaat gccggcgggt
     2521 gtgatgataa aagttttgtg gataagatca tttcgaaagg cagagagatg gagcgaaatg
     2581 ctgtgcagtt cgaaactgag atcttaagaa ttgtgaatga gaagatcggg gaatgagtga
     2641 tgagtggtcg gtaatgagtg caagggcggt gttgttgcgc aagcataatc tgcgaatgct
     2701 ttttgacgaa tagcggtcag acggttcaaa accgtcagcc cgataacatc aatcaattgg
     2761 caaatcgtgt agaaaaattt tattctatcg taactctata aactcttcac atgaaagccc
     2821 tgtcgttagc attttcttgt ttctccgctt caatgtattc tttttcgccg gcaggtttga
     2881 acgtatttgc agtacatcta ttcacaaaaa aatttggcta tgacaccgaa aattaaaaca
     2941 ggtcttgttt ttattttact gctatctatt tcctgtacaa aagaaaatga tgttagtgac
     3001 cctgctgtaa ttgataacta ttcaaactct gcttttattt ccgggcaaaa tgatttcaat
     3061 aagtttgccg ccgtgagcat tggtactcaa aagtggatga caaagaacct tgacgttaat
     3121 cactatagga acggagacaa aataccacaa gtgacggtcc cgggcaaatg ggatacctta
     3181 accacgggtg catggtgttg gtttaagaat gactcagcca acggtgcggt ttatggaaga
     3241 ttatacaact ggtacgcggt aaatgatccg agaggattgg ctccttcagg ctggcatgtg
     3301 ccgactgaca gagaatggac aacattatca aactttttag gaaaaaatgc aggtggcaaa
     3361 ttgaaagata cagggaccat cgatgccggc gccggtttat ggtgggctcc caataaaggt
     3421 gcaacaaatt caaccggttt cacaggcctt ccgggaggat accggagcgg ggacgatggt
     3481 atgttcggcc aacttggagg tcaaggccac tggtggagtt ctacagagta ccaaacattt
     3541 caggcatggt atcgagtgct gagctacaat tacgcgatta tttacagatc ccaccaaact
     3601 gccacaaggc gttatgggtt ttcggttcgt tgtattaaag attgattgac cgtgtatctg
     3661 catcacacaa tcatggcatc agttttcggt gtacagcggg aatttaaggt agaggttgtt
     3721 aattcaatta tgagagttag agtttgaaaa ctttcagtaa aggtgtgtat tacttaagca
     3781 tctcatcaac ccgcaaaaaa acgacggtga agtttgtgaa agaatgattc ttcacaagta
     3841 aaaaatgaag cattaaaccc tccagatatg aaaacaattt tattctcaat tctctgtgcc
     3901 ctggttacaa cgctaggaaa tgcacaggca ggaacgttag acacgacatt tggaaaggga
     3961 ggcggagtga tcacagattt cagaacgtct gcaggagcaa aagatgaggt aattcaacct
     4021 gatggaaaaa tcgttgttgt gggcatttcg gaaaacaaat tttctattgc ccggtatctt
     4081 gtaaatggag aattagatcc ttcatttgga aagcatggaa gaatgctgac agcgatacca
     4141 ggtcacgata tctgcatagc caatgcagtt gcattgcagt ctgatggtaa aattcttgtt
     4201 gccggcacag ccggtgacga ctttgcggtt gtaagatata atcctggtgg tgcaattgac
     4261 acttcgtttg gaacaggtgg aggaactgtt accgatttca gacacggaga agacgctgca
     4321 acggatatgg taattcaacc agacggcaaa atacttgtat ccggatacac ctttacgtca
     4381 tacggaaatt ttgcgttagc acgatatcag ccaaacggag ttcttgattc aaattttgga
     4441 aaggatggta agatcgttac aaccattcgg cgagatgatc gctcacaatg tatggccctg
     4501 caacccgacg gaaagatcat tcttgccgga gatgctgact ggaactttgg aatggtccga
     4561 tacaagaaga gcggtgatct tgattcgtct tttggatcaa acggaagagt gctaacaaag
     4621 atggtaaggg ataatatttt ttgttttgca attgcgatcc agccggatgg caagatcatt
     4681 ttaggaggca gggctttcaa cggtccggga ccaataatag cccgatacaa aatgaatggc
     4741 gaactggatt caacattcgg tgtaaatgga tttgtaaaaa aaattgaggg aggcgttcat
     4801 aaaatttact ccttgcgcat acagcctgat gggaagattt tggcggccgg tgctcaaggt
     4861 attcagggct cagttacagg atatgactat actcttttac gatacttgcc aactgggcga
     4921 cttgatacaa cattcggtac aaatggtcag gccgaccctg ttgattttaa taagaaagac
     4981 gatgacgctt atgccatggc ccttcaatct gacggcaaga ttgtactggc aggaactgca
     5041 acgattcgta ttattaaaga tggcacttat tattattaca cggaatacgg tgttgttcgc
     5101 tttaacaacg acataggcaa cgttgacaaa aaacaatata ggagtttgcc ggttgctcaa
     5161 tcgagcattt acgaagaaaa taaagttgtc ttgtatccaa accctgtgag agatgtttta
     5221 aatattagag ggctggatca atttacgaat tacgatttac gaattacgaa tgcaaagggc
     5281 agtgttgttg cgcgcgatcg gaacgctcaa agcggtctga acggtattta caccatgcag
     5341 gcgcaaagct tgagttcagg tctttattat tccactatta cttcacccaa caaaaaaaca
     5401 acggtgaagt ttgtgaagga ataaggagag acattacctc taatgacttt atcgttccga
     5461 tttcatggcc gcgttaattg cttttaataa acttgagcac agtaagcttg tcatgttctt
     5521 ttattcttaa taaatatagg ccgctgctca atgattctat accaatgggc tgcatattta
     5581 tcccagggtt caatagtagc tttgccgatt gcatagtgat tccatcgctt gtcgtaattg
     5641 ccacgtatac ttcctgaaaa gatgtagaag aatattttag cgttattata tctcttgctg
     5701 gatttggaaa aagcattggt ttggaaccgt ccacattcac acgttgattg tcaagtttga
     5761 ttggattggg attttcattt gcggagcctc gacatattat ggcttcttcg gccacccgcg
     5821 actccgatac ctcagcatct tccaggtaaa cactatccgt atacacagca tacgatttgt
     5881 cgcttgtagt aaataatttt gaatgaaata atgggtcgta tttcggcaat gcgaaatcag
     5941 gacatatcct acctaacgag tcaaattttg aaatttcata attataacca tttccagcga
     6001 cgttaatata acttccattt ttttcatagt acgcccctga taaatcggcg ggcaatagat
     6061 atttatgtag ttcaagataa tgctgtacgc tgaaaacatt gttgtgaacg acatcgccat
     6121 ggatttgacc acttgtatct ttaaaataaa agaaacattt tttgtaatat ccatattcac
     6181 cttcgaattc cccaaatgcg caaagcatat tgttcgctat ccacagtttc gacaaagtca
     6241 ggaataaata atgcgaacta atccttttaa acgcaagaac ttttcctttg ctgttcagcc
     6301 gtaacaaagc accatcggta tagtatagcc attgataatt tatgttgccg cctatcaaaa
     6361 actcattgtt tgcctcaact atacactttg gattatatat atctgtggaa ctttgctgag
     6421 aatcaaaagt cgtataccag tctaaggtgc catcgctcgt tattcttaca atttcgatcg
     6481 ttgtcgaagt atagctgatg ttatcgttca cattatatac caggattgct cctccatgag
     6541 aatcctcgta cagaacctgc ggagaaacgg aaggatagtt tttggatctt aatctcttag
     6601 tccaaattat atccccgttc cggttacatt ttattatgag tccaccctga ttttggtgat
     6661 ttccttgaaa ggaatgtgaa aacaatataa gtccctcatc ctttgtaaca agaccaatgg
     6721 ctcgctcgga aaactggcta gcaaaccttt tcgataaaag cacattgcca atgctgtcga
     6781 gcctaagaca ataaatgatt gagtcaagtt gcccgccaac tacaacacta ccatgatttg
     6841 gtaatcgcaa gacttgtgaa ggccgaccgg gtatatttga tttgaaagtc tctctaaacg
     6901 ttgtttggct aaatacagag acatcaaaac aaatcgaaag aataaaaaaa attgttttga
     6961 tcacattggc aatagtaaag ttcatagaac aatgcattaa tttttcagtc agctttttaa
     7021 atatacgagt ttttaaaaag attctgaaca ttagggcttg atggatttac gagttacgat
     7081 ttgcaaacta cgagtgcaaa aggcagtgtt gtcgcgcacg atcggaacgc tcaaagcggt
     7141 ctgaacggta tttacaccat gcaggcacaa agcttgactg ccggccttta ttatttgact
     7201 attacttcaa ccaacaaaaa aacaacggtg aagtttttga aggaatagcg gtactgcttc
     7261 gtagaaggag attcccgatc aggtctggaa tgacggaccg gaaccggcac gcaccttcgt
     7321 agcacaaaat gttcgtttaa tcagacacga aaatgatcaa ccaccggcga tctcactctt
     7381 taagaaattt caacgtcgtt gccgcatgtc cggcagcgat tctaacaagg tatattcctg
     7441 cagaaagttg ttttgtgtta aatgaataat tgtcgttcgc agttgtttct tgtttcaata
     7501 atttcccttt cgcatcaata atagaaattg ttttcgtaaa agatgacaag ccgtctatgc
     7561 gaagaatgtc ttgaacaggg ttaggtgaaa gtagaatgtt cgccattaca tttttatttt
     7621 tttgagcatt agaaacacca atgctattaa taggtgtaga agtattatct ccattgtacc
     7681 tggcgatagc tatgaaagaa aaatcataag atacatttcc gacaactact atttttccat
     7741 tgttttgaat tgctaagtcg ttggccatac taggaaaaac gtcgctaaaa gaagtagtta
     7801 ctaagccatc ccctccaaaa gtactatcta tgattccgtt ttgtttatat cgcagcaagg
     7861 caaaggcctg ataataagcg ccggcagtta atatttttcc atctgtttgt attgcaactg
     7921 aatttacatc acagccaacg gcaaatatgg taatcacttt cccatgcgtg ccaaaagaat
     7981 tatcaagtct tccatcctgc ccgtacctgg ctaaggcaac gccaactttc ttcgtataac
     8041 taccggcagc aacgatcttg ccatcgctct gaattgcgac tgaaaaagcc tgggcgtcac
     8101 caccaaaatc ggttattacc ttaccactat caccaaacga atcatccaaa ttaccgttat
     8161 ccgtatacct tgctaacgca aaatatattt gtggatgatc cgaatatcgt gtatacaccg
     8221 agcctgcgac aacaattttt ccattggcct gtaaggctgc cgcatttaaa tggttatctg
     8281 atccgctgac attcgtgatc acttcgccgt ttgtaccaaa cgaactatct acccggccgt
     8341 tcttcttata cctcaccaga gcgaaatttt cgccgggtcc atatactgat gtacctgcca
     8401 gcacaatttt tccgtctgct tgcaaaagaa ccgaattacc accctcactt aagccaaaat
     8461 cagtgacaac tttaccatca ttaccgaagc tactgtcaag gcttccgtct tgctgatatc
     8521 gggccagggc aaaatcgaca ttgttactat tccaagcact cccggccacg attatctttc
     8581 cgtctgactg cagcaccatt gatgttcctc cggcatttcc gtcaaaatcg gtaagcacaa
     8641 taccctgatc gccaaacgtt ttatcgagaa atccgctctt tttatagcga aggacaagga
     8701 aatcatgacc acatgtacct gcaactacaa tttttccatc cggctgtatc gcgacagcgc
     8761 tggcaacaca atatccgctg attcgtgtta ttattttgcc gttgtctcca aacgaagaat
     8821 caagcgtgcc ggcctgttca aatgacgttg cagataacaa catgcagatc acaaaaagaa
     8881 gcgtagcatt tttcatgaga atgtttagta gttaa
//
LOCUS       DASQJI010000483         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2821753,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000483 DASQJI010000000
VERSION     DASQJI010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2821753"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /gene="mazG"
                     /locus_tag="VEV83_13265"
     CDS             complement(<1..696)
                     /gene="mazG"
                     /locus_tag="VEV83_13265"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HYK46140.1"
                     /translation="MEYAERFTKLVDIMDELREKCPWDKKQTIQTLRPLTIEETYELA
                     DAITEQNWEELKEELGDLLLHILFYSRIAKEQNKFTLVEVIEHICNKLIVRHPHIYGD
                     VNVNDEEDVKRNWEKIKLTEGKTSVLSGVPVSLPAVVKAARIQEKAKQVGFEWEKKED
                     VWLKVQEEMKELQQAVEQNNHAEQEDEFGDVLFSLVNYARFLNIDAENALERTNKKFI
                     YRFTRMETIASDAG"
     gene            927..>1600
                     /locus_tag="VEV83_13270"
     CDS             927..>1600
                     /locus_tag="VEV83_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46141.1"
                     /translation="MQKVILIGVLLATLNHVCAQYYYNDILSLKESNRMYLTLKKNNI
                     KQVSATSIESDNTPTEGFSYNRVIEDNGSLVITHISLATAGSSVTYEYYTGDRLMKSI
                     DSSFRVATTVEYEYNDRNNVASIETQTDDTSMNVFSTELHKWFYTNGVPDSMLRVKER
                     TDTTIVTFKKDDRQNVTEEIWTKKGKTLEHYYYYYNDHSQLTDIVRYNNKARQMLPDF
                     LFQYDGG"
BASE COUNT          460 a          361 c          315 g          464 t
ORIGIN      
        1 acccgcatct gaagcaatgg tctccattcg tgtgaagcga taaataaatt ttttgtttgt
       61 tctttcgagc gcattctctg catcaatatt caaaaatcgt gcataattga caaggctaaa
      121 caacacatct ccgaattcgt cctcctgctc tgcgtgattg ttctgttcta cggcctgctg
      181 caattctttc atttcttcct gcacttttaa ccaaacgtct tcctttttct cccattcaaa
      241 tcccacctgc tttgccttct cctgtatgcg cgcggctttc acaactgcgg gtaacgaaac
      301 cgggacgcca cttaaaacag atgttttgcc ttcggtgagc tttatttttt cccagttcct
      361 tttcacatct tcttcatcat tcacattaac atcgccataa atatgcgggt gccgaacaat
      421 aagtttgttg cagatgtgct caataacctc gacaagggtg aacttatttt gttcctttgc
      481 tatgcgcgaa taaaaaagaa tatgcaacaa aaggtctcca agctcttctt tcaattcctc
      541 ccagttttgt tctgtgatcg cgtctgcgag ttcatacgtt tcctcgatcg ttagcggccg
      601 tagcgtttgg atagtttgtt ttttatccca tgggcatttt tcacgcaatt catccatgat
      661 gtcgacgagt ttcgtaaaac gttcagcgta ttccatacta gcttggttaa atagtgagcg
      721 gaaatatgac aatcaatatt acaggaacaa aagcataaga aaataccaaa aacccaaatt
      781 ggcttaccgt gttcgcgcgg taaatatcac gtattcgtgc attcggttaa taaaaccaga
      841 atttcactaa aaatacacac gacaatttaa gaagcaatat ataccttgcc gccgtttttt
      901 cgttagagga tattcaaatt gagttcatgc agaaggtaat tttgattggt gttttattgg
      961 caacccttaa tcatgtttgt gcccagtatt attacaacga cattttgtcg ttaaaggagt
     1021 cgaacaggat gtatcttact ctgaaaaaga acaatataaa acaagtttca gcgacgagca
     1081 tagagagcga caacacgcca acggaaggat tttcttataa ccgggtaatt gaagacaatg
     1141 gttccctggt gatcacgcac atcagcctgg cgacggcagg cagctccgta acctacgaat
     1201 attataccgg ggatcggctt atgaaatcga tcgacagctc attccgcgtg gcgaccaccg
     1261 tagaatacga gtacaatgac cgcaacaacg tcgcctccat cgaaacacaa acggacgata
     1321 cttcaatgaa tgtgtttagt actgaattgc acaagtggtt ttacactaat ggtgtgcccg
     1381 attcgatgtt gcgcgtaaag gaacgtacgg atacaacgat tgtgaccttt aaaaaagacg
     1441 acaggcagaa tgtgaccgaa gaaatatgga ctaagaaggg aaaaacgctt gagcattatt
     1501 actactacta taacgatcat tcgcagctca ccgacattgt ccgctataac aacaaagcca
     1561 ggcaaatgct gcctgacttt ctgtttcagt atgatggcgg
//
LOCUS       DASQJI010000484         7212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2515486,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000484 DASQJI010000000
VERSION     DASQJI010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7212
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2515486"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VEV83_13275"
     CDS             <1..527
                     /locus_tag="VEV83_13275"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HYK46142.1"
                     /translation="AKPFKRGEYEKCVFNQCDLSNNDLSECKFIDCEFSSCNLTMAKI
                     DNSVFRDVKFRDCKMLGLQFHSCNEFGLSFSFEGCQLNQSSFYKRNIRKIIFKNSQLQ
                     ETDFADCDLTAGVFENCDLRQAIFDNTILEKADLTTAYNFSIDPAMNKIRKAKFSIFG
                     LPGLLGKYEIEIRQ"
     gene            complement(564..1589)
                     /locus_tag="VEV83_13280"
     CDS             complement(564..1589)
                     /locus_tag="VEV83_13280"
                     /inference="COORDINATES: protein motif:HMM:NF013335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HYK46143.1"
                     /translation="MRSLKTAFIIALLQMAANIGNAQQIFDTGLLKPRFRVIIDNDFG
                     GDPDGLFQLAHAMLSPSIEVRAVIGSHLNANDGFDRSKEQAQHAAQQAQQLLKIMKMS
                     DAVPVIAGSNTAMQNDSTPVASDAVNFIIKEAMRTDTKMPLFIVCGAGLTEIASAVLT
                     RPEIENKLTLIWIGGPEYADLSVPPPGYSTPEYNLNIDINAAKVIFNRSAVDLWQVPR
                     NAYRQCIVSYAQLLTNVKSKGETGKYLVEKLEHVTQLLNKYGLNIGETYILGDSPLVL
                     LTALQSTFEADPSSSKYVIKIAPFINDKGEYNYNSKGRNIRVYDWLDTNLMLNDLFAK
                     LDMLSRQ"
     gene            1728..2066
                     /locus_tag="VEV83_13285"
     CDS             1728..2066
                     /locus_tag="VEV83_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46144.1"
                     /translation="MKKYLVLYTAPIEASQQMAQTSPEDQAKGMEAWMEWARRCGDKL
                     VDLGSPLAGGQKLSPAGSSNSNLNIAGYSVLQAENMEEAKALLQGHPHLGWNAACTIE
                     VYETMPIPGM"
     gene            2119..2412
                     /locus_tag="VEV83_13290"
     CDS             2119..2412
                     /locus_tag="VEV83_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HYK46145.1"
                     /translation="MIIVHDIFVCKAGNASKLAKLFKEVMGGNEEVINIMTDMTGQYN
                     RVIMVSQYENLAAYEQSWEKYRKDSEQMKEMAEKMKGYTDMYLTGSREIYQVW"
     gene            complement(2550..4994)
                     /locus_tag="VEV83_13295"
     CDS             complement(2550..4994)
                     /locus_tag="VEV83_13295"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HYK46146.1"
                     /translation="MKKFICLLFFIVTAFIEGRTQSARMQTLFDSGWKFFRGDAGMGE
                     KESLNDADWRDVELPHDWSIEDLPDQSDSVIGPFTTKSIGATATGYTVGGTAWYRKHF
                     TLNNNSNKKVQIYFDGVYMNSDVWINEHYLGNHPYGYTPFYYDITPYLKQSGENILAV
                     RVRNEGRNSRWYSGSGIYRHVWLTVTNPIHIQQWGVFVTTPKVTSNAATINVSTNPTG
                     FQNLPGLSHLKLRTQILDAKNKIVGTTETNIPISQLPNIPITQSIELTNPSLWSPESP
                     YLYHAVSEIIQDTKTIDHAVTSFGVRSIDITAEKGFLLNGHSIELRGGCVHHDNGPLG
                     SATIDRAEERRVELLKQFGFNAVRTSHNPPSQQFLDACDRIGMIVIDEAFDQWERAKN
                     PEDYHLYFDTCWKKDIDAMVLRDRNHPSVIFWSIGNEINERADSSGLVIAKKLIDQVR
                     ISDTTRPITEAICDFWDHPGYKWDTTAAAFALLDVGGYNYLWRQYEQDHQKYPERIMM
                     GTESFPLEAFQNWQQVEQHPYVIGDFVWTAMDYMGETGIGHTGLDSTPGFQLQTFPWF
                     DAWCGDIDLIGGKKPQSYYRAVVWNRSKMEMLVHAPIPQGHKEAVSAWGWYDELPSFT
                     FPGNEGKPLQVHVYTKYDGVRLFLNGRLIGEQNVSPQTNLTATFMINYEPGVLKAIGL
                     QDGKAVDSVVLQTAGKPARIRLVADRTHIRASRNDLVYITGEILDEKGQLVPDATLPL
                     LFSMSGNAEITATANANPSDMESFSAEAGQKKAQHKTFRGKCLIVVRPVGKPGKITVK
                     AEAEGLTPGQVVIDTQ"
     gene            complement(5098..5934)
                     /locus_tag="VEV83_13300"
     CDS             complement(5098..5934)
                     /locus_tag="VEV83_13300"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HYK46147.1"
                     /translation="MKSIFDEVSLECSKITTKAYSTSFTLGILFLNKRLRGPIYSIYG
                     FVRLADEIVDSFHDYDKASLFETFRQATDEALQHKISLNPVLNSFQSAVHRYQVRKEW
                     IYTFLDSMEMDLHKHRYSEEEYKKYIFGSAEAVGLMCLHVFSEGDDKLFEHLKPYAMK
                     LGAAFQKVNFLRDLQADNNELGRTYFPGLNLREFSQEQKRELEKDIEHDLSEAMKGIK
                     LLPASSRNGVYLAYYYFAVLLKKIKQTPAHQLLTRRVRIPNFQKLLLMIRSNVRHQLN
                     LF"
     gene            complement(6004..6915)
                     /locus_tag="VEV83_13305"
     CDS             complement(6004..6915)
                     /locus_tag="VEV83_13305"
                     /inference="COORDINATES: protein motif:HMM:NF014646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYK46148.1"
                     /translation="MKKFKQLDLFSISDLQHFSGIKAHTIRMWEQRYNALQPLRSEGN
                     TRYYNGSQLRRLLNIVSLMNEGHKVSQLGLLPDQALYNLVDKHLSAPVPDPSDEYLIS
                     QIISAAVNYDEAYFDKIFLNAVLRSGLKDAYVKIIYPVLQRLGLLWAGNKLHPAQEHF
                     VTNLFRRKMLSAIDALPPPSSSKTSWLLFLPENEFHDLGLLLSSFLLTQAGTKVIYLG
                     ENMPLDSLKSAVAELRPTALLTFLIGKKEMEQEKAYLSSLSKSFRTSKIFAACEGSWA
                     NGLPKGKNLAIVRSVDELEKEIRANVV"
BASE COUNT         1936 a         1666 c         1602 g         2008 t
ORIGIN      
        1 ttgcaaaacc gttcaaacgc ggcgaatacg aaaaatgtgt tttcaatcag tgcgatcttt
       61 caaacaacga cctttctgaa tgcaaattca tcgattgcga attcagtagc tgcaatttaa
      121 cgatggcaaa aattgacaac agcgtattca gggatgtaaa gttccgtgac tgcaaaatgt
      181 taggtcttca gtttcattcg tgcaacgagt ttggcctttc attttctttc gaaggttgtc
      241 agctaaacca gtcgtccttc tacaaaagaa atatccgcaa gataattttc aaaaattcgc
      301 agctccagga aacagatttt gctgactgcg acttaaccgc gggtgtattt gaaaattgcg
      361 atctgaggca ggcgatattc gataacacta tacttgaaaa agcagacctt acaaccgctt
      421 acaacttttc catcgaccct gcgatgaata agatcaggaa agcaaaattt tcaatcttcg
      481 gtctgcccgg ccttttgggc aaatacgaaa tcgagatacg ccagtgaacc gcacaattcg
      541 aaccgactca tagcgaaatc gttctattgc cgtgagagca tgtccagctt tgcaaaaaga
      601 tcattcaaca taagattcgt atcaagccag tcgtacaccc tgatgtttct tcctttagaa
      661 ttgtagttat actccccctt gtcattaatg aacggcgcta tctttatcac atatttactc
      721 gaagatggat ctgcttcgaa tgttgattgc agcgctgtaa gcagcacgag cgggctgtca
      781 cctaaaatat atgtctcgcc aatattcaat ccgtatttgt tcagcaattg cgtaacgtgt
      841 tcgagttttt caacgaggta tttacccgtt tctcctttcg atttcacatt cgtcaatagc
      901 tgtgcataag aaacgatgca ttgacggtaa gcatttctcg gcacctgcca caaatcaaca
      961 gccgacctgt tgaagatcac cttcgctgca ttgatgtcaa tatttagatt gtattccggt
     1021 gtggagtaac cgggtggtgg cactgaaaga tctgcgtact ccggaccgcc gatccagatc
     1081 agggttaatt tattttcgat ctccgggcga gtgagcaccg cacttgcgat ttctgtcagt
     1141 ccggcaccgc aaacaataaa caagggcatc ttcgtatcgg ttcgcatcgc ctctttgatg
     1201 ataaaattca cggcatcgct tgcaactggc gtactatcgt tttgcatagc cgtgttcgag
     1261 ccagcgatca caggcacggc atcagacatc ttcattattt ttaaaagttg ctgcgcctgt
     1321 tgtgcggcat gttgcgcctg ttcctttgat cggtcaaaac cgtcattcgc gttcaggtgg
     1381 gaacctatca cggcacgcac ttctattgat ggggaaagca ttgcatgtgc aagctgaaac
     1441 aggccgtcgg gatcaccgcc aaagtcatta tcaattataa cacgaaagcg tggttttaat
     1501 aggcctgtgt caaagatctg ttgtgcattc ccaatattag cagccatctg taacagcgca
     1561 attatgaaag cggttttaag agatctcacg gtattgttat tttaaaacga agatagcgtg
     1621 cgggcagtaa cgattctttg accaccattc gtaaaatccc aaggtaaact tgtgtttaac
     1681 atttgtaact tggttgccat ttttctcact acttaaaaca acgccagatg aaaaagtatc
     1741 ttgtgcttta caccgcaccg attgaggcaa gtcagcagat ggcccagact tcaccagagg
     1801 accaggcaaa aggtatggaa gcctggatgg aatgggcccg gagatgcggc gacaaacttg
     1861 ttgacctcgg ttctccactt gccggcggac aaaaactttc gcccgcgggt agcagcaaca
     1921 gcaatttgaa catcgctggt tattcggtat tgcaggcaga aaatatggag gaagcaaaag
     1981 cgttgctgca aggtcatccc catttaggat ggaatgcggc atgcaccata gaggtatatg
     2041 aaacaatgcc tattccgggc atgtaactcc gctcattaat cgcagttaaa aacatctaat
     2101 cattctaaaa caattcagat gatcatcgtt cacgacattt tcgtttgcaa ggccggtaat
     2161 gcgtccaaac tcgcaaagct ttttaaagaa gttatgggag gaaatgaaga agtgatcaac
     2221 attatgaccg acatgacggg ccagtacaat agagtaataa tggtgagtca atatgagaac
     2281 cttgccgctt atgaacaaag ctgggaaaaa tacaggaaag acagcgagca aatgaaagag
     2341 atggccgaaa aaatgaaagg gtatactgac atgtacctca cggggtcaag agaaatttac
     2401 caggtgtggt agtatttttt tgaacctcgg tcttgcgata tatccgtgac acctttttca
     2461 cgcgtcacac cggagcggca acttggaatc gcgcagacgc tccgccggga gttgtatcaa
     2521 ttgccccgac cttcaggtcg gggaaaatgt tattgagtgt cgatcaccac ctggcctgga
     2581 gttaaacctt ccgcttctgc tttcacggtg atcttgccgg gcttgcctac cggtcgcacg
     2641 acgatcaaac acttaccgcg aaaagttttg tgttgcgctt ttttctgccc cgcttctgca
     2701 gagaaacttt ccatgtccga aggatttgca ttggccgttg cggtgatctc ggcgttaccg
     2761 ctcatgctga aaagtaaagg gagtgtggca tcgggtacaa gttgtccttt ttcatcaagt
     2821 atttcaccgg taatatatac aaggtcgttt ctgctcgccc tgatgtgcgt acgatctgcg
     2881 accaggcgta tgcgcgccgg ctttcctgct gtttggagta caacggaatc aactgccttg
     2941 ccgtcctgta atccgatcgc ttttaaaacg cccggctcat agttgatcat aaacgttgcc
     3001 gttaagtttg tttgtggcga cacattttgt tcgcctatca atcggccatt tagaaaaagc
     3061 cgtacgccat cgtattttgt gtacacgtga acctgcaaag gtttgccctc attcccggga
     3121 aaggtgaacg aaggcagttc gtcgtaccaa ccccacgcac taacagcttc cttatggcct
     3181 tgggggatcg gcgcatgcac gagcatctcc atcttgctgc ggttccatac aacagcccga
     3241 taatatgatt gaggcttttt tcctcctatg agatcaatgt caccacacca tgcatcgaac
     3301 cacggaaatg tttgcaattg aaatccgggc gtgctgtcaa gacctgtgtg accaattccg
     3361 gtttcgccca tgtagtccat tgccgtccaa acaaaatcac cgatcacata aggatgctgt
     3421 tcaacttgct gccagttctg aaacgcctcc agtggaaaac tttctgtgcc catcataatt
     3481 cgttccggat atttttgatg gtcctgttca tactgcctcc acaaataatt ataaccacct
     3541 acatcaagca aagcaaacgc ggctgcggtc gtgtcccact tgtaacccgg atgatcccag
     3601 aaatcgcaga tcgcttcagt gattggccgc gtggtgtcag agattcgtac ctggtcaatt
     3661 aattttttcg caataacaag cccggaagaa tcggcccgtt cattgatttc atttcctatg
     3721 ctccagaaaa tcacggaggg atgatttcta tcgcgcaaca ccatcgcatc gatatctttt
     3781 ttccaacaag tatcaaaata aagatgatag tcttccggat tctttgcacg ttcccattga
     3841 tcgaacgctt catcgatcac gatcatgccg attcgatcgc aggcgtcgag aaattgttga
     3901 gacggaggat tgtggcttgt acgaacagca ttgaagccaa attgctttaa gagttccact
     3961 cgtctttctt ccgcacggtc tatcgtggca gaaccaagcg ggccgttatc atgatgcaca
     4021 catccgccgc gcaattcgat cgaatgaccg ttgagtaaaa aacctttttc ggctgtgatg
     4081 tctatcgaac gaacaccgaa agaagtaact gcatgatcga tcgtttttgt atcctgaatt
     4141 atttcagata ccgcatgata cagatacggc gattcgggcg accataaaga tggattagtg
     4201 agctcgatgg attgcgttat cgggatattg ggtaattggg atattgggat attcgtttct
     4261 gtggtgccga cgatcttatt ttttgcgtcg agaatttgtg tgcggagttt cagatggctt
     4321 aaacctggca ggttttgaaa acctgtcggg tttgttgaaa catttattgt cgcggcattc
     4381 gatgtaacct ttggagttgt aacaaacacg ccccattgtt gaatatgaat aggattggtc
     4441 accgttaacc acacgtgacg ataaatgccc gacccactat accatcgcga attccttccc
     4501 tcattgcgaa cgcgaaccgc aaggatattt tcgccggatt gcttcagata gggcgtgatg
     4561 tcataataaa acggcgtata cccgtaagga tgattcccga gatagtgttc gttgatccat
     4621 acatcgctgt tcatgtaaac accatcaaaa taaatttgca cctttttgtt tgaattatta
     4681 tttaaggtaa aatgcttacg gtaccatgcg gtgccaccga cggtgtaacc ggtagcggta
     4741 gcgccgatgc ttttcgttgt gaacggaccg atcactgaat cggattgatc gggaaggtct
     4801 tcgatactcc aatcgtgcgg aagttcaacg tcgcgccaat cagcatcgtt gagagattct
     4861 ttttcgccca ttcccgcatc gcctctaaaa aatttccagc cggagtcaaa cagcgtttgc
     4921 atgcgggcac tttgagtgcg tccttcgata aatgccgtaa caatgaaaaa aaggaggcag
     4981 atgaactttt tcataaaaag cttcttgcat ccaaaaataa tgtttcggac acgagaaacg
     5041 ggccaacccg cactggttat ttacggaacg ctttaagaaa atcaactagt ttgggcacta
     5101 aaacaagttc aattgatgtc gaacattgga gcggatcatc agtagcaatt tttgaaaatt
     5161 agggatgcgc actcgtcgcg ttaatagttg gtgagctggc gtttgcttta tttttttcaa
     5221 caggaccgca aagtaataat aagcgagata gacgccgttc cttgaactgg caggcaaaag
     5281 tttgatgcct ttcatcgcct ctgaaaggtc gtgttcgatg tctttttcca attctctttt
     5341 ctgctcctgc gaaaactctc tcaggttcag gcctggaaaa taagtccgcc cgagctcgtt
     5401 gttatccgcc tgaaggtcgc gcaaaaaatt taccttttga aatgccgcgc ccaatttcat
     5461 tgcgtacggt ttcaaatgtt caaatagctt atcatcacct tcggaaaaca cgtgcaggca
     5521 catcaagccc accgcctctg ccgacccgaa tatgtatttc ttatattctt cttcagaata
     5581 ccggtgttta tgaaggtcca tttccatgct gtcgaggaat gtatatatcc attctttgcg
     5641 gacctggtac cggtgcacgg ccgactggaa agaattgagt acaggattga gagaaatttt
     5701 atgttgcagc gcttcatcag tcgcctgccg gaaggtttcg aataaagacg ccttgtcgta
     5761 atcgtgaaaa ctgtcgacga tctcgtccgc aagacgtaca aaaccataaa tggaatatat
     5821 cggtccccga agccgcttat tcaaaaacag gatacccagc gtaaagcttg tgctgtaagc
     5881 cttcgtagtt atcttactgc attcgagaga tacctcgtca aagattgatt tcatttcttt
     5941 taatttatac acccgttttc gatcaatgca acaacaacat tgtttatatt tccagatatg
     6001 taattaaaca acattagctc ttatttcttt ttccagttca tcgacagatc ggacaatagc
     6061 gaggttcttt cctttcggta aaccgtttgc ccatgagcct tcgcaggcag caaagatttt
     6121 ggatgtcctg aaactttttg acagggatga caggtaagcc ttttcttgtt ccatttcctt
     6181 tttcccgatc aaaaaggtta aaagggcggt cggcctcagc tccgccacag cgcttttgag
     6241 agaatcgagc ggcatatttt caccgaggta gataaccttt gtccctgcct gtgtaagcag
     6301 aaaacttgaa agcaataagc cgaggtcatg aaattcgttc tcgggcaaaa aaagcaacca
     6361 ggaagttttt gatgacgacg gcggcggaag tgcgtcgatg gcggacagca tttttcgacg
     6421 gaataaattg gtgacgaaat gctcctgtgc ggggtgtagt ttgtttcccg cccaaagtag
     6481 cccaagccgt tgcagcacag ggtagatgat ctttacgtag gcatccttca atcccgaacg
     6541 caagactgca ttaagaaata ttttgtcgaa atacgcttca tcataattaa cagcggcgga
     6601 tatgatttgg gatatcaaat attcgtcgct cggatcggga acaggcgctg aaagatgttt
     6661 gtctaccaaa ttatacagtg cctggtcggg caagagaccg agttgagata ctttatgacc
     6721 ttcattcatc aggctcacga tgtttaacaa ccgccgcaac tgggacccgt tgtaataacg
     6781 cgtgttgccc tcgctgcgta gcggctgaag ggcattgtag cgctgctccc acattcttat
     6841 ggtatgcgct tttattcccg aaaaatgctg aaggtcagaa attgaaaata gatccaactg
     6901 tttaaatttc ttcaaaaata tttaaacagt tatttgtagc caaatttttt ttgttggatt
     6961 ttagaaaaag acgttgcgac tcacatcgga ctcacccgat cattcattaa gtaacgactg
     7021 ttatacaacc tgaaagctgc gacttgcggc ttgcaacgct gtcaccagcg taagtttacc
     7081 tttcaaacaa atacctattc aacaaccgct tcccttcgac tatcgcttct ctcccactcg
     7141 attcaatccc ataccatcca tgataacttt ctttacatag agagatcatt tttgcagtaa
     7201 gctcttctgt tg
//
LOCUS       DASQJI010000485         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_211742,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000485 DASQJI010000000
VERSION     DASQJI010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211742"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VEV83_13310"
     CDS             complement(<1..651)
                     /locus_tag="VEV83_13310"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK46149.1"
                     /translation="MQKMLISLVLVVAGFTVAAQNIVHDPNAQVRSVGTFTKIHISSA
                     INLYLSQGNQQAVAVSSEDPKVTERIITEVKDGVLKIYVENGVWNKWNWGNKHLRAYV
                     TFTTLQLLDASGACNVELTDPINVGDFKLVLSGASNMRGVVKGANLDFDLNGASNGKI
                     DASGTSLKMSESGASNYKGKITTGKADFDVNGASVIDIGGTATDLSVNASGASNFKG"
     regulatory      733..836
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            886..>2048
                     /locus_tag="VEV83_13315"
     CDS             886..>2048
                     /locus_tag="VEV83_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK46150.1"
                     /translation="MKTFLGTIAIVLTSLLTNAQFDISGIVTNNEGEVLRGATITLDI
                     KNVQRTQTNQNGEFSFLNVPAGKYNIKAEFIGMQAFDTSVNVTANAHLQIQLNPSDDF
                     LQPLEVSSLRASDRAPFTKTNITKTDIAKINVGQDIPILLNQTPSVTITTDAGNGVGY
                     TGIRIRGTDATRINVTLNGIPFNDAESMATYFVDLPDFISSVNSIQIQRGVGTSTNGP
                     GAFGATINLSTNEWNKKAYAELENSYGSFDTWKNTVKIGSGLIDNHFTIDARLSRITS
                     DGYIDRATSDLKSFYVSTGYLAKNTSLRFNIFSGKEKTYQAWYGIPIDILNTDRTFNP
                     AGTEKPGTPYNNQTDNYWQTHYQLFVDHDFNKNWKFNTAFFLVRGKGYYEEYKA"
BASE COUNT          601 a          474 c          422 g          551 t
ORIGIN      
        1 gcctttaaaa ttgctggcac cactagcatt cacggagaga tcggttgctg tgccgccaat
       61 atcaatgacg gaggcaccat taacgtcaaa gtcggcttta cccgtggtta tctttccctt
      121 gtaattgctg gcgccacttt cagacatttt aagcgaagtg ccacttgcat cgatcttgcc
      181 attggaagca ccgttcagat cgaaatccag gtttgcacct tttacaactc ctctcatgtt
      241 gcttgcaccc gacaatacga gtttaaaatc accgacatta atcggatcgg tcagctctac
      301 attacatgcg cccgaagcat ccagcagttg taacgtcgta aaagttacat aagctctcaa
      361 atgtttgttg ccccaattcc atttattcca tacaccgttc tcaacataga ttttcaagac
      421 gccatctttc acttcagtta tgatcctctc cgtaactttt gggtcttcag aactcacagc
      481 aaccgcctgc tgattcccct gcgacaaata aaggtttatc gcactggata tatggatctt
      541 tgtgaaagtg ccaacgctac gcacctgcgc gttaggatcg tgtacgatat tttgagctgc
      601 gaccgtgaaa cccgcaacaa ctaagaccag gcttattagc atcttctgca taaaaggttt
      661 ttgtgtgtaa cggcaacccg gataaaaggt tacatcgaat tcaaatttct gtgattaatt
      721 ttgtgcgatt attttttatt cccggggtgc ttcctgatac aatcgggagg ctgagattac
      781 acccgttgaa cctgaacagg gtaatacctg cgaagggaag gtgcctcaca taagccgcac
      841 attctccagc attattcctg ttcccgaaat cttaaaataa agaaaatgaa aacgtttttg
      901 ggaacgatcg ctattgtctt gaccagcctt ctaacgaatg cgcagttcga tatttccgga
      961 attgtcacca ataacgaagg agaagtcttg cggggcgcaa caatcacctt ggacataaag
     1021 aatgttcagc gcacgcaaac aaatcaaaat ggtgaattca gttttttaaa tgtaccggct
     1081 ggcaagtata atattaaagc tgaatttatc ggcatgcagg catttgacac gtcggttaac
     1141 gttacagcaa atgcccactt gcagattcaa ctaaacccgt ccgatgattt tcttcagcca
     1201 ctcgaagtaa gttcgctgag agcttcagac agagctccgt tcacaaagac gaatattaca
     1261 aaaaccgata tagcaaaaat caacgtcgga caggatattc caatcctgtt aaatcaaacg
     1321 ccttctgtta ccataacaac cgatgcgggc aacggcgttg gatatacggg tattcgtatt
     1381 cgcggcactg acgcaacacg cattaacgtt accctgaatg gcattccatt taacgatgcg
     1441 gaaagtatgg caacttattt tgttgatctt cccgatttta tttcttcagt taattctatc
     1501 cagatacagc gcggcgttgg tacttcgacg aatggccccg gcgcttttgg cgcgacgatc
     1561 aatcttagta cgaacgaatg gaacaagaaa gcatatgcgg aattggaaaa cagttatgga
     1621 tcattcgata cgtggaaaaa tacggtgaaa atcggcagcg ggttaattga taaccatttc
     1681 acgatcgacg cacgattaag ccgcataaca agcgatgggt acatcgacag agcgacaagc
     1741 gatctcaaat cattttatgt gtcgaccgga tatttagcga agaacacatc cttgcggttc
     1801 aacatttttt caggtaaaga aaaaacttac caggcgtggt acggaattcc gatcgatatt
     1861 ctgaacaccg atcgcacttt taatcctgct ggcactgaaa aacccggcac gccatacaac
     1921 aatcaaacgg acaactactg gcagactcat taccagttat tcgttgatca cgatttcaat
     1981 aagaattgga aattcaatac tgcctttttc ctggtaagag ggaaaggtta ttatgaagaa
     2041 tataaagc
//
LOCUS       DASQJI010000486         4162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2055401,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000486 DASQJI010000000
VERSION     DASQJI010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4162
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2055401"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VEV83_13320"
     CDS             complement(<1..1169)
                     /locus_tag="VEV83_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK46151.1"
                     /translation="MVDRRVAPAIIDATDFNLHLKPYNYFNLENNVPVYAIHAPEQEV
                     IMVEWVFYAGNCYEEKNIQAASANYLLKNGTRNKTAFAINEHFEFYGAYLNRHCYNET
                     ASITLHSLSRHLPELLPVVAELLTDSIFPEEELSIYRQNQKQSLAVNLKKCDFVANRL
                     IDEYVYGFTHPYGKYASTLDYDNVQRNDLIRFFDEFYLNGKCMLFVAGNLPPDIDKLL
                     NQHFGSLQLNKKEAPLIRYDPNPSAEKKHKLINDANGVQAAIRLSRVFPNRHHPDFIK
                     AQVLNNIFGGYFGSRLMSNIREEKGYTYGIHSYLENHIHESAWTVSTEAGRDVAEATI
                     EEIYKEMQRLCDEVVDEEELHLVRNHMIGSILGDLDGPFQIISRWKNYILNNLTA"
     gene            1271..1504
                     /locus_tag="VEV83_13325"
     CDS             1271..1504
                     /locus_tag="VEV83_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46152.1"
                     /translation="MEPSIREFFKRLVTTISLLVLWMSVNIAIGIRYNYAFFEDKIHW
                     SNIVFYVWLLVSLFALIWFYVSIWKKPIEHLND"
     gene            1589..1999
                     /locus_tag="VEV83_13330"
     CDS             1589..1999
                     /locus_tag="VEV83_13330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46153.1"
                     /translation="MQQLRNVSRFIVISGTLIIWAIKFVIRPFHIYAEWLTPAVGVAP
                     NFIGSFLLPFGACWLFRKYFLLRDVNDLKLTCWFGLLLVIINEYLQLVPIFGRTFDRL
                     DILASFAGVYFGYSAFAKMMTARVGRLSPAADNA"
     gene            complement(2044..3831)
                     /locus_tag="VEV83_13335"
     CDS             complement(2044..3831)
                     /locus_tag="VEV83_13335"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46154.1"
                     /translation="MNANLSFKHPAKFAVILLISILAGFATFAQTPCAGDSTTADFSA
                     GRTSGTYISSGGDGEVTLSPVRASEFTEFPPVEEWNAFPWKTGGSATVADGSLTVDGA
                     RFNTEPETLAFGPGSALEFVATFASTTFQHIGFGGGTDATADGGIYWGQHAWAMFSTG
                     DNGILKARTFDGTNASNFEIPGTYTGAPHLYRIEWIAPSTFNYYIDGALVHTESAISI
                     SESMRVAISDFDPGTPLTVDWIRLSPPYSTSGTFESRVFDAGSMSAWGIASWIADVPA
                     NTALTISVRTGNTAVPDNKWTDYTVVSNGDDIGTASRYIQYKAEFTTTEPTVTPVLSS
                     FSISNCIACTLKAAILSQTNVTCAGGDDGSVTIVAKKGTAPYQYRKNQNGVSQTDATL
                     SNLKAGDWKIFVTDANGCTVIVKVTITEPARLQLINVEQTNVSTAGGHDGSVKVSATG
                     GTAPYQYKKGKNGTYSSDSLFTRLKAGSYKIFARDTNGCETTLNVTITEPSAAVSQSS
                     ANALTNNLDLSFQVTPNPTTTDFRVTINGNMNEPVSINVFNMFGASVYKASGSITKVY
                     GFGSELSPGIYVLEVSQGSKKKTTKIVKQ"
     gene            complement(3885..>4162)
                     /locus_tag="VEV83_13340"
     CDS             complement(3885..>4162)
                     /locus_tag="VEV83_13340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46155.1"
                     /translation="NAISKTNSAVDEFQVTVSPNPSTSEFTLVTRSVDFAAFEVRVAD
                     MYGKIVYTAKGSAGQVLRFGANFIPGVYIVDIFENNRRKTLKVIKAN"
BASE COUNT         1032 a          950 c          934 g         1246 t
ORIGIN      
        1 tctgcagtaa gattgttcaa tatgtagttc ttccatcggc taatgatctg gaatggtccg
       61 tccaggtctc ccaggatact tcctatcata tgattccgta cgagatggag ttcttcttca
      121 tctactacct catcgcataa acgttgcatc tctttatata tttcttcaat ggtagcttca
      181 gcaacatcac gacccgcctc cgtagaaacg gtccacgcgc tttcatgaat atgattttca
      241 agataactat ggatgccata cgtataccct ttctcttcgc gaatattgct catgagccgc
      301 gaaccaaagt atccaccaaa tatattattc aacacctgcg cttttataaa gtcaggatga
      361 tgccggttag gaaaaactct cgatagtcgt attgcagcct ggacgccatt tgcatcattg
      421 ataagcttat gctttttttc tgcggacgga ttaggatcgt aacgaattaa cggcgcctct
      481 tttttattca gctgcagtga gccaaaatgc tggttgagca atttatcaat atccggcggc
      541 agatttccgg ccacgaacaa catgcactta ccattcaggt aaaactcatc gaaaaaacga
      601 ataaggtcat tccgctgcac attatcgtag tcaagtgttg acgcatattt gccatatgga
      661 tgcgtaaagc cgtagacata ctcgtctatt aaacggttag caacaaaatc gcattttttc
      721 agattgactg ccaggctttg cttttgattt tgcctgtaaa ttgaaagctc ctcttccggg
      781 aagatcgaat cggttaaaag ttctgcaact accggtaata attcgggcag gtgtcggctc
      841 aggctgtgta atgtgataga agcggtttca ttatagcaat gcctgtttaa ataagcgcca
      901 taaaattcga aatgctcgtt gatcgcaaaa gccgttttgt tacgggtccc gttcttcaac
      961 aggtagtttg ccgaggcagc ctggatgttt ttttcctcgt aacagttgcc cgcatagaac
     1021 acccattcca ccatgatcac ttcctgctca ggcgcgtgga ttgcgtatac aggtacatta
     1081 ttttcaaggt tgaagtaatt atacggtttg agatgaagat taaaatccgt ggcatcaatt
     1141 atagcgggcg ccacccttct gtcgaccata atttcttatt agagcgcaaa agtaaagtaa
     1201 tgcggcaaat cttttccttg aggcaatagt cgtaatttgc tttcgttttt gccgacttga
     1261 ttcaattcgc atggaaccgt caataagaga atttttcaag cgactcgtta caacgatctc
     1321 cctcctcgtg ctctggatgt cggtcaatat cgcaatcggc atccggtata attacgcttt
     1381 tttcgaagac aagatccact ggagtaacat tgtgttttat gtgtggctgc tggtcagcct
     1441 gtttgcattg atttggttct acgtctcgat ctggaaaaaa ccgatcgagc atctcaatga
     1501 ttaaattgct tgttatttcc gaaaaaataa gtgcagcata taatagtccg cttctgcatt
     1561 tccttatttt tatttcttat ccaacattat gcagcaacta agaaatgtct cgcgatttat
     1621 cgtgatcagc ggcacattaa tcatctgggc gatcaagttc gttattcggc cttttcatat
     1681 ctacgccgaa tggcttactc ctgctgttgg tgttgcacca aatttcatcg gctccttttt
     1741 gttacccttt ggcgcctgtt ggttgttcag aaaatatttt ttgttgcgtg atgtgaatga
     1801 cttgaagctc acttgctggt ttgggctgtt gctcgtgatc attaacgaat atcttcaact
     1861 ggttccgata ttcgggagaa cattcgaccg tctcgatata ctcgcatcat tcgcgggcgt
     1921 gtattttgga tattcagctt ttgcaaagat gatgaccgcc agggtcgggc gattaagtcc
     1981 ggctgctgac aatgcataaa aaaaccgtct cacggttatg agacggtttt caaatcgaat
     2041 catttactgc tttacaatct tcgtagtttt cttttttgac ccctggctaa cttcaagaac
     2101 atatatgccg ggtgatagtt cgctaccaaa accgtagacc ttagttatag agccgctcgc
     2161 cttataaacg cttgctccga acatattgaa gacattaatg gaaaccggtt cgttcatgtt
     2221 gccatttatc gtcaccctga aatcggtcgt ggttggattt ggtgtaacct ggaagctaag
     2281 atccaggttg ttcgttagcg cgttagcaga actctggctc actgctgcag acggttccgt
     2341 aatggtgaca tttaaagtgg tctcacaccc atttgtatcc ctggcaaaga tcttataact
     2401 gccggctttt agacgtgtga ataatgagtc ggagctatag gtgccatttt ttcccttttt
     2461 atattggtat ggcgctgtgc ctccggttgc cgacactttc acagaaccgt cgtgaccgcc
     2521 agcggtggat acgttggttt gttctacgtt gatgagttgg agccgtgccg gttccgtgat
     2581 cgtcactttt acaatgactg tgcaaccgtt tgcgtctgta acaaatattt tccaatcacc
     2641 agcctttaaa ttgctcaatg tagcatcagt ttggctgacg ccgttctgat tttttctgta
     2701 ctgataagga gcggttccct tcttcgccac aattgtcacc gagccatcat cgccgccagc
     2761 acacgtaacg tttgtctggc tgagtatggc cgcttttaac gtgcatgcta tacagttgct
     2821 gattgaaaaa ctgcttaaca ccggcgttac tgtgggttct gtagttgtaa attctgcttt
     2881 gtattgaatg tatcgggaag ccgttccgat gtcatcgccg ttggaaacga ctgtgtagtc
     2941 cgtccattta ttatcaggta ctgctgtatt gccagtgcgc acgctgatag ttaaggccgt
     3001 gtttgcaggc acatccgcta tccaggaagc gatgccccag gcactcatag agccggcgtc
     3061 aaacacgcgt gattcaaatg ttcccgatgt cgagtatggt ggtgatagac ggatccaatc
     3121 aacagtaagc ggggttcctg gatcaaaatc gctgatggca acgcgcatgg actcagaaat
     3181 cgatatcgcg gattccgtat gaacgagagc accgtctatg taatagttga aagttgacgg
     3241 cgctatccat tctatgcgat acaggtgggg cgcgccagta tatgtgcctg gtatctcaaa
     3301 gttagacgcg ttggttccat cgaaggttct tgccttcaat attccgttgt ctcctgtgct
     3361 gaacatggcc caagcatgct gtccccaata tatcccacca tcggctgtgg cgtcagtacc
     3421 tccgccaaaa ccaatatgct gaaacgttgt cgaagcaaag gtggccacaa actccaatgc
     3481 gcttccgggg ccaaaggcca gtgtctcggg ctccgtatta aatctcgctc cgtcaactgt
     3541 gagcgatccg tcggccacgg tcgcactgcc tccggttttc cacgggaaag cattccattc
     3601 ttcaactggt gggaactcag tgaattcaga agcacggaca ggggaaagag ttacctctcc
     3661 gtcaccgcct gaagaaatat aagtacctga tgttctgccc gcgctaaaat cagccgtagt
     3721 actatcgcct gcacatggcg tttgagcgaa agtggcgaaa ccggctaaaa tgctgattaa
     3781 aagaattact gcaaattttg cagggtgttt gaaagataga ttagcattca taaaggggtt
     3841 tttgatttaa aaaataatct tcgggatgtg cagcaggata aggtctagtt cgctttaatt
     3901 accttaagcg tttttcttct attgttttcg aaaatgtcaa caatatagac gcccggaata
     3961 aagttggcac cgaaccgcaa aacctggccg gctgaaccct tagctgtgta aacaatctta
     4021 ccgtacatat cagccactct cacttcgaat gcagcaaagt caactgaccg tgttaccagt
     4081 gtgaactctg atgtggatgg gtttggcgaa actgttacct ggaactcgtc gactgcagaa
     4141 ttcgttttac tgattgcgtt tg
//
LOCUS       DASQJI010000487         6309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2976070,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000487 DASQJI010000000
VERSION     DASQJI010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6309
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2976070"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VEV83_13345"
     CDS             <1..430
                     /locus_tag="VEV83_13345"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HYK46156.1"
                     /translation="NRTSVGEILKSALGDTSVFVTGFGTYSGTVTASRIWGGAPETMG
                     LAPAEPGSWDDILHNLDKNNKYILFSESRNNATLQNKWIYMRSIGVLYLPYQRSGASE
                     SIPAKRYDAFIFIDHSSALHPIQTKMNVTTTSAETDDDDR"
     gene            501..839
                     /locus_tag="VEV83_13350"
     CDS             501..839
                     /locus_tag="VEV83_13350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46157.1"
                     /translation="MKFLSIFVLSLVLFQGCSKKDSGDNGAVKSEKCGDVTHAMLINK
                     TGLDGCRWALRLDNGDYLEPTNLSDFDFEFVDNKSVAVNYRVRSDLVSSCMIGEVVDI
                     ICIDEYDEAN"
     gene            848..1948
                     /locus_tag="VEV83_13355"
     CDS             848..1948
                     /locus_tag="VEV83_13355"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYK46158.1"
                     /translation="MATDNLYKILTRALLYASLLIVLLWFLFKIINVILLILLALILV
                     LIINVPVAWLEKKKIRRGWACLIVFALIAAGIVLLCWLIVPKISVQLTALITNLPAYA
                     DQLSKNIASWFKDYPKLSAEIADEGAILSQLISSLPDTLVSVGTYSLSLLSSLLIFII
                     FMSLVIYAVVNPRPLFEIYFSMFPVPKREKAKNALYKTSVMLNGWIKSNLIGGSIDAA
                     CVTAFLSIMNVPGAWVWGAITFFAELIPKIGFYIMAVPPILVALSINPLTALWVTIFF
                     LVLDEIMGDFVLPRIRSSTMKLHPVSTIIVLLIMGSAFGFVGALLATPLTAIIKAFYE
                     EFYAGHAKNDKQMDERVDAIMYHTDERKTKAP"
     gene            1997..2347
                     /locus_tag="VEV83_13360"
     CDS             1997..2347
                     /locus_tag="VEV83_13360"
                     /inference="COORDINATES: protein motif:HMM:NF040323.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase superfamily protein"
                     /protein_id="HYK46159.1"
                     /translation="MAFEGIVPILYSENVERSIAYYMEQLAFDEKWAWDHPTTFGGVS
                     KDSVRLFFCLKGQGQPGTWIAINVDNVDEYYQTINARGAKILSAPKDMEWFMREMLVE
                     DPDGHIIRFGHAIE"
     gene            complement(2354..3742)
                     /locus_tag="VEV83_13365"
     CDS             complement(2354..3742)
                     /locus_tag="VEV83_13365"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK46160.1"
                     /translation="MKKIAIRSLLVLVGIALAWSIHYAWVSFPLINGFDAKQVCTCVF
                     VSNRTIEDLDTNEMSTFPFSLGSYKVNKDDSSVTSSVWGMATKKAIYRKGIGCTLIND
                     AAEKEVRSQTFNIPAPPVINGDSIQWPYGDKLVDTLPSNIDVAKLKAAVDKAFTEPYP
                     GKKQRTRAVVVVDNGQLVAEKYAPGFDRKTKMYGWSMAKSFTGALIGTLVQHNKLDIE
                     QPAPVPEWQNANDPRHKITIENLLQQTSGLDFAEDYTKASEVTNMLYKKDDMAAYAAS
                     VRLAHDPGTVFNYSSGNSNILSRVIRQTVGEKKYAAYPFDALFYKIGMYSASMEPDAS
                     GTYVGSSYINATARDYARFGLLYYNDGVWNGERILPEGWVKQTAIAPACNKSKKYGYQ
                     FWLNGVQLNDSSKRLFPDVPADMFYCDGYAYQDIYIIPSKKLVVVRLGLTLDRSFNEN
                     EFLKNIIDAIKQ"
     gene            3879..4421
                     /locus_tag="VEV83_13370"
     CDS             3879..4421
                     /locus_tag="VEV83_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46161.1"
                     /translation="MPRINPVLKTDVPQPLQKVFDDHVRTYHTRITNMKATLAHSLPA
                     FEVYMQWYVLYEEMKKFLGERLAYLFAWSVSYASNCPLCTTYFRKMMIDKGENPESLE
                     LSAFEKQVLDFGSAIAVQQGHVDEELYAKTAEYFTNEEMVLLIAFAGQMIATNIFNNV
                     IQTDIDDYLHQYLPNSLSPI"
     gene            4418..5224
                     /locus_tag="VEV83_13375"
     CDS             4418..5224
                     /locus_tag="VEV83_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin-coupled SDR family oxidoreductase"
                     /protein_id="HYK46162.1"
                     /translation="MMFDLKDKVAFITGAAHGQGRATALALAKEGVHIAAFDIARQLD
                     YPAYNLASEDDLAALKKEIEALGVRCVACKGDVRNDADVTDAVNSAKKQFGRLDILFN
                     NAGICAYGLAHELTEHEWDSMLDINLKGAWMMARRIIPVMIEQRSGVIINNSSVAGLR
                     GMNRLSHYAASKWGLTGLTKSWAIELAPFNIRVVSIHPTGVNTPMNDGLAEMEGTTAK
                     EIAERSAGNLLPVPWVEPEDVANAVVFLASGKSRFVTGSQFVLDAGLLSR"
     gene            5362..5970
                     /locus_tag="VEV83_13380"
     CDS             5362..5970
                     /locus_tag="VEV83_13380"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK46163.1"
                     /translation="MKKLSILCAAMMLFAFKTNDNSISEQERKNAIDLLQKTEQGVID
                     AVAGLSDAQLNFKAAPDRWSVLECVKHIAITEKDLWHLTDSTIQASANPDKRSAIKAS
                     DEQLVQMVESREKKVKTFPPFEPQNTPYKSLDEALSSFKTDREKLIDYVKSTNDDLRN
                     HVVTLAPGSFDCYQMILFIAAHSNRHTQQIDEVKADPNFPKN"
     gene            6095..>6309
                     /locus_tag="VEV83_13385"
     CDS             6095..>6309
                     /locus_tag="VEV83_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46164.1"
                     /translation="MKSFSKKIGAVIFLMMITANFGWSQNSKQSDEPFTIENYYKVKW
                     GYADEFITLWKTNHYPLLKKAIEHGDIL"
BASE COUNT         1796 a         1365 c         1416 g         1732 t
ORIGIN      
        1 taaccgcaca agcgttggtg agattttgaa atctgccctc ggcgacacca gtgtttttgt
       61 caccggcttt ggcacatact caggcacggt gaccgcctcg cggatatggg gtggcgctcc
      121 agaaacaatg ggtttagcac ctgctgagcc cggtagttgg gacgacatat tgcataacct
      181 tgacaaaaac aacaaataca ttttattcag cgaaagtcgc aacaacgcaa ccctccaaaa
      241 taaatggata tacatgagaa gcatcggcgt gttatatctg ccgtatcaac gatcaggtgc
      301 aagcgagtcc attcctgcaa aacgctacga cgcattcatt tttatcgatc attcttcggc
      361 ccttcatccc atacaaacga agatgaatgt aacgacaacg agcgctgaaa ccgatgatga
      421 tgatcgttaa ctacacgcac agtcgctggt gaagcttgaa ataagcccgg atttttttta
      481 tattagataa attttcagac atgaaattct tatcaatttt cgtcttaagc ctggtactgt
      541 tccagggctg ttcgaaaaaa gacagtggag ataatggtgc ggtgaaatct gaaaagtgcg
      601 gcgacgttac acatgcaatg cttataaata aaacagggtt ggacggatgc agatgggctt
      661 tgagattaga caatggagat tacctggagc caactaatct ttccgatttt gattttgaat
      721 tcgtcgacaa taaatctgtg gcggtaaact atcgtgtgcg gtctgattta gtgagtagtt
      781 gcatgatagg agaagtggtt gatataattt gtattgacga atatgatgag gctaattaaa
      841 attttcgatg gccaccgata atttatacaa gatcctgacg agagctttat tgtacgcctc
      901 ccttctcatt gtgctgcttt ggttcttgtt taaaataata aacgtaatcc tgctgatact
      961 cctggcacta atactggtgc tgataattaa tgtgccggtg gcgtggctcg aaaaaaagaa
     1021 gatccgcaga ggctgggcat gcctgatcgt gtttgcgctg atcgccgccg ggattgtgct
     1081 attgtgctgg cttattgttc ctaagataag cgtgcagcta acggccctta tcacgaacct
     1141 gcccgcgtac gcagaccagc tttcgaaaaa catcgcttcc tggttcaaag actatccgaa
     1201 actgagcgct gaaattgcgg acgagggcgc tatactttcc caactaattt catctcttcc
     1261 tgatacactt gtcagtgtgg gcacatattc actttcatta ttgagctcgc ttcttatttt
     1321 catcatcttt atgagcctgg tgatctatgc agttgttaac ccccgcccac ttttcgagat
     1381 ctatttttcc atgttcccgg ttccaaaaag agagaaggca aaaaatgctt tgtacaagac
     1441 atccgttatg ctgaacggtt ggataaaatc aaacctcatt ggtgggagca tcgacgcggc
     1501 ttgtgttact gcttttctca gcatcatgaa tgtgccgggc gcctgggtat ggggagcgat
     1561 aacttttttc gcagagttaa ttccgaagat cgggttttat attatggctg tcccgccgat
     1621 cctcgttgca ttgtcgatca atccgcttac tgctttgtgg gtgacaatat tctttcttgt
     1681 actagatgaa ataatgggcg attttgtgtt gccaagaata cggtcttcaa caatgaaatt
     1741 acaccctgtt tccactatca tcgttttatt gatcatgggt tccgcgttcg gatttgttgg
     1801 cgccctgctg gcgactccgt taacagcaat tataaaagca ttttatgaag agttttacgc
     1861 cggtcatgcg aaaaacgata agcagatgga cgagcgcgta gacgcgatca tgtatcatac
     1921 cgacgaacga aagacgaaag caccgtgaac aatccgcgta atctttattg tttaacttgt
     1981 aataaaattt acagtaatgg catttgaagg aatcgttcct atcctgtatt ctgaaaatgt
     2041 tgaaagaagt atcgcctact atatggaaca acttgctttc gacgaaaaat gggcctggga
     2101 ccatccaacc actttcggcg gtgtatcgaa agattctgta agattatttt tttgtctgaa
     2161 gggccagggg caaccgggca catggatcgc aattaatgtt gacaacgtag acgagtacta
     2221 ccaaacgatt aacgcgcgtg gcgcaaaaat cctctcagca ccaaaagaca tggagtggtt
     2281 catgcgagag atgctcgtgg aagatcccga cgggcacatc attcggtttg ggcatgcgat
     2341 tgaatgaagc gaactattgt ttaattgcat caattatatt tttcaaaaat tcattttcat
     2401 taaatgatct gtcgagcgtt aatcccagcc ggacgaccac aagttttttt gaaggaataa
     2461 tatagatatc ctggtaagcg tagccatcgc aataaaacat gtcagcgggt acatcgggga
     2521 acaaacgctt agaggaatca ttcaactgca cgccattgag ccaaaactgg taaccatatt
     2581 tttttgattt gttgcatgcc ggtgcaattg cagtttgttt cacccaacct tccggtaaaa
     2641 ttctttcacc attccaaacg ccgtcgttgt agtaaagcaa gccgaaacgt gcataatctc
     2701 ttgccgttgc attgatgtaa gaagagccaa catacgttcc tgaagcatct ggttccatcg
     2761 acgcgctgta catgccgatc ttataaaaca atgcgtcgaa tgggtacgcg gcatactttt
     2821 tttcgccgac cgtttgccgg atgacgcgtg acagtatgtt actgttaccg ctggaataat
     2881 taaacaccgt tccgggatca tgtgccaggc gaacactcgc cgcataggcg gccatatcgt
     2941 cttttttgta aagcatattg gttacttcgc ttgcttttgt gtaatcttcg gcaaaatcaa
     3001 gaccgcttgt ctgttgtagt aaattttcaa ttgtgatctt gtgccgtgga tcattcgcat
     3061 tttgccattc cggaaccggg gccggttgtt ctatatccag cttattgtgt tgcacaagtg
     3121 ttccgatcag tgcgccagtg aaactcttcg ccatcgacca accgtacatt tttgttttcc
     3181 ggtcgaagcc gggtgcatat ttttctgcaa caagctgccc gttatcgact actacaacgg
     3241 cacgtgtgcg ttgtttttta ccgggatacg gctctgtaaa cgccttgtca actgcagctt
     3301 tcaatttagc cacatcgata tttgaaggaa gagtatctac gagcttatct ccatacggcc
     3361 attgaatact gtcgccattg atcaccggcg gagcaggtat attaaatgtc tgcgaacgaa
     3421 cttccttttc tgcagcatcg ttgatcaggg tgcaaccgat acccttcctg taaattgctt
     3481 ttttggttgc cattccccat acagaagatg taacagaaga atcgtcttta tttaccttgt
     3541 aactgcctag actgaacggg aaggttgaca tctcattcgt atcaagatct tcaatcgtgc
     3601 ggtttgaaac aaacacgcag gtgcacacct gttttgcatc gaaaccattg atgagtggaa
     3661 aagagaccca tgcgtaatgg atgctccatg caagcgcaat gccgacgagc acgagcaaag
     3721 aacgaatggc tatttttttc aagcagttat tttttagcac aactaggacg ataaatttag
     3781 taattatttg aaaaacaaat cggcacaccc gcaacgtttg gccaccaaaa aatcgcgttt
     3841 cttattcgac acatcctaat tttgttgaca ttctttttat gccaagaata aatccggttt
     3901 taaaaacaga tgttccgcag cctttacaaa aagtatttga tgaccatgtg agaacttatc
     3961 acacacggat cacaaatatg aaggcaacac tcgctcattc gctgccagcc tttgaagtat
     4021 atatgcaatg gtatgttttg tacgaagaga tgaaaaaatt cctcggcgag cgattggcgt
     4081 atttgtttgc gtggtcagtc tcctatgcat ctaattgccc attgtgcacc acgtatttca
     4141 gaaagatgat gatcgacaaa ggggaaaatc ctgaaagcct ggaactgagc gcgtttgaaa
     4201 aacaagtgct tgattttgga agcgccatcg cggttcagca aggccatgta gacgaggagc
     4261 tttacgcgaa gaccgcagag tatttcacca atgaagaaat ggttctcctt attgcctttg
     4321 ccggccaaat gatcgccaca aatattttca ataacgttat tcagacagat atagacgatt
     4381 acctgcatca atatttgcct aattcacttt caccgatatg atgtttgatc tgaaagataa
     4441 agttgcattt ataaccggcg ccgcgcatgg gcagggaaga gccactgcgc tcgcactggc
     4501 gaaagaaggt gtgcacatcg ctgcattcga tattgcacgc caactggatt atcccgctta
     4561 caatttggcg tccgaagatg atcttgctgc attaaaaaaa gaaattgaag cgctcggcgt
     4621 gcgatgcgtt gcctgcaaag gcgatgtaag aaacgacgct gatgtaacag atgcggtaaa
     4681 ctctgcaaaa aaacaattcg ggcgccttga cattttattt aacaacgccg gcatttgtgc
     4741 gtatggactt gcccacgaat taacggaaca cgaatgggac tcgatgcttg atatcaatct
     4801 aaaaggagcg tggatgatgg cacgaagaat cattccggtg atgatcgaac aacggtcggg
     4861 tgttataata aacaattcat cggtggcggg ccttcgcgga atgaacaggc tcagccatta
     4921 tgccgcttca aaatggggac ttaccggact cactaaatcg tgggccattg aattggcgcc
     4981 gtttaatatc cgggttgttt caattcatcc aaccggtgtt aacacgccaa tgaatgatgg
     5041 actcgctgaa atggaaggaa cgactgcaaa agaaatcgcc gaacgaagcg ccggcaatct
     5101 tctgccggtt ccatgggttg aaccggaaga cgtggcaaac gcagtggtgt tccttgcttc
     5161 cggcaagtca agatttgtga ccggctcaca gtttgtgctt gatgcaggct tgctaagcag
     5221 gtgatacaaa aaaactactg caatctgtcc gttttataaa agttcatacg ttttaattaa
     5281 aacggaaaac agacgtgagg cgacggatca aatttttaag aacaatggga cttaattttt
     5341 catcatcaaa cataaaattt catgaaaaaa ctatcaattc tttgcgcggc gatgatgttg
     5401 ttcgccttta agaccaacga taactctatc agcgaacagg aaaggaaaaa cgcgattgac
     5461 cttttacaga aaacagagca gggcgttatc gatgcagttg ccgggctgag cgacgcccag
     5521 ttgaatttca aggcggctcc tgatagatgg agtgttcttg aatgcgtaaa acatattgcc
     5581 atcactgaaa aagatctgtg gcatctcacc gacagcacga tccaggcgag tgccaatcct
     5641 gacaaacgca gtgcaataaa agctagtgat gaacagttgg tgcaaatggt agaaagccgt
     5701 gaaaagaaag taaagacatt tccgccattt gaaccgcaga acacgcctta taaatccctc
     5761 gatgaagcgt taagttcttt caaaaccgat cgtgaaaaac tgatcgatta tgtgaagtca
     5821 acaaacgacg atctgcgcaa ccatgttgta acattagcgc ccggttcatt cgactgctac
     5881 cagatgatcc ttttcattgc agcgcacagt aaccgccaca ctcaacagat cgacgaggta
     5941 aaggcagatc caaattttcc aaagaattaa atagtgtcat tcgcagagcc cttcaattac
     6001 gaggggcttt ttttatgggg cgttgtatcc cctctgcaat tcgcgtacct ttcaaccgac
     6061 agttcaaaac gtcgaagaac caaatctgaa tacaatgaaa tcattttcaa agaagatcgg
     6121 tgcagttatt ttcctgatga tgataacggc aaattttggc tggtctcaaa acagtaaaca
     6181 gtcggacgaa cctttcacta tagaaaatta ttacaaggtg aaatggggat atgctgatga
     6241 attcatcact ctatggaaaa caaatcatta tccgcttttg aaaaaagcaa tagaacatgg
     6301 agacattct
//
LOCUS       DASQJI010000488         4928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_365416,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000488 DASQJI010000000
VERSION     DASQJI010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365416"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VEV83_13390"
     CDS             complement(<1..525)
                     /locus_tag="VEV83_13390"
                     /inference="COORDINATES: protein motif:HMM:NF025946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK46165.1"
                     /translation="MKKSFWIVILTAFAVGACECVSSQNFHAYETSYDHKGRKVLRGL
                     LARADIESDTAFSWFQKNYHLGKPDAATVDAFKKHASDLHMLLFVGTWCPDTQNLLPE
                     FYQVTDAASFPDSCITIIGVDNDKTTLDNLHRTFHLVDVPTFIVMKDGKEVGRVVEYG
                     ETGEAMKELGKIVAG"
     gene            complement(522..1076)
                     /locus_tag="VEV83_13395"
     CDS             complement(522..1076)
                     /locus_tag="VEV83_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYK46166.1"
                     /translation="MQQLDLFNKGSRKEELLKPLPKPQNLEKKDDTKEHVKQKKDASF
                     KFTEQKVPSKRGRKSFKDINLDVALLEIPDDEVLYQKQYYSITEVAEWFHVNASLLRF
                     WEREFDILRPRKNRKGDRLFRPEDIKNLRIIYYLLRQQKYSIEGAKQFLKDNKKKAEM
                     QTQLVEALTKFRSFLLELRANLGA"
     gene            1175..2035
                     /locus_tag="VEV83_13400"
     CDS             1175..2035
                     /locus_tag="VEV83_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HYK46167.1"
                     /translation="MRIKKICVCGAGTMGSGIAQVAAKNGFSVIQYDVDEQMLLKSKH
                     IISEDLQKLVEKGKITAAEKEAALSQLVFSTNINDCIADVVIEAVVENKEVKQQVFNS
                     LCTINSSDTILTTNTSSISISEICSGAAYEERFAGMHFFNPAPVMKLVEVVRGEKTAP
                     AVIDALVELAKLLNKTPVVCNDSPGFIVNRVARHYYLEAMNMVEQGIANVETVDAIME
                     ATGFKMGPFKLMDLIGLDVNYSVSNIVWEALGKPERLRPSTLQKNKVTMRELGRKTGK
                     GFYDYETSNP"
     gene            2053..3066
                     /locus_tag="VEV83_13405"
     CDS             2053..3066
                     /locus_tag="VEV83_13405"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYK46168.1"
                     /translation="MISDQEDKSTTLTRTVFITGATGLIGSHLLKALTRQGKKVKALY
                     RAQKGFEHPCVEWVRGDISDILLLEEAMQDVQQVYHCAALVSFNPKQKKELLKTNVDG
                     TANVVNACLENNVQKLLHVSSVSALGRLRNSAMIDESMQWSEETNNSTYGESKYLAEM
                     EVWRGIAEGLNAVIINPTIVLGSGDWNKGSSEIFEKVYNEFPYYSEGVTGFVDVDDVV
                     NAMITLMESNISADRFIVSAENVSYKTLFEMIAAAFNKKPPQKKITPFMASAVWRFAA
                     IKSLFSADAPFITKETARTALIKAHFDNRKLLEAVPSFRYTPLRESVQRIANEFKLMH
                     NLQ"
     gene            complement(3122..4498)
                     /locus_tag="VEV83_13410"
     CDS             complement(3122..4498)
                     /locus_tag="VEV83_13410"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK46169.1"
                     /translation="MKIIKNFLAVLLPVIFVAACNKDLNVEPQNNVTEIKTAADVTAL
                     LFGGYKLLQNPSAFGEQYILMADLLAKEDQVIWTGTFTQYRQIADKTQDKTSPVATSI
                     WENSYAIINTVNTVLDKISVVDASDQAAIAAEAKFIRGITYFELVNFFAQPYSAGNVE
                     SNLGVPLVLAPVYVYDSTKDRPARATVSAVYQQVIADLTDAANNLPEFNPDGRATSGA
                     AKAFLSRVYMQMLDYENAATMANDVIESGDYSLNANFAQAFNNAANSSEDIFGIQQTS
                     QSNAGTSNNGLTTFYADYGTYGGRGDVQVDPGYFDYFSGTDVRQDFVYSGYSINGRDG
                     IYTMKWAEFYRVIPVVRLAEMYLTRGEANLRKGGAPIGPATPLEDINTVRERSNAAPL
                     NSVTVQDFIDERFRELGFEGDRLWTLKRAQSDDIDGHPYDADILVLPIPQREMDVNSN
                     LIQNDGYN"
     gene            complement(4517..>4928)
                     /locus_tag="VEV83_13415"
     CDS             complement(4517..>4928)
                     /locus_tag="VEV83_13415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK46170.1"
                     /translation="YNAGGVYMSAGFYNGFDNQTTDMMDSWQKPGDQTNIPRVGWFFG
                     SGYNDASQWLYDGSYIRLKNATLGYTLSKGLIQRMHLSSARIYVAGYNLLTWTKYPSD
                     PEVNTEVLGNVGGGQDFYTIPQARTYTLGLTVKF"
BASE COUNT         1342 a         1126 c         1099 g         1361 t
ORIGIN      
        1 cccagccaca atctttccga gctctttcat cgcttctccg gtttcgccat attccaccac
       61 acggccgact tcttttccgt ccttcatcac gatgaatgtc ggcacgtcaa caagatgaaa
      121 tgttctatga agattgtcta aggttgtttt atcattgtca acaccgataa tcgttataca
      181 gctatccggg aaacttgcgg catcggtgac ctggtaaaac tcaggtagca ggttttgtgt
      241 atccggacac caggtaccca cgaacaacag catgtggaga tcgctcgcat gttttttaaa
      301 tgcatcaact gttgcggcat ccggtttgcc gagatgataa tttttctgaa accagctaaa
      361 tgcagtatcg ctctcgatgt ctgcgcgcgc aagtaagcca cgcaaaactt tcctgccctt
      421 atgatcgtaa cttgtttcgt aagcatgaaa attttgggat gatacacatt cgcaggcacc
      481 aactgcaaat gccgttaaga ttacaatcca aaacgatttt ttcatgcgcc taaattagcc
      541 cgcaattcca agaggaagga acggaatttt gttaaagctt ccactaattg tgtctgcatt
      601 tccgctttct ttttgttgtc tttcaagaat tgcttggcgc cctcgatgga atatttttgt
      661 tggcgaagta gataatagat tattctcagg ttcttgatgt cttcaggccg gaacaacctg
      721 tccccctttc ggttcttgcg tggcctgagg atatcgaatt ctctttccca gaagcgcagc
      781 agggacgcat tcacatgaaa ccattcggcc acctccgtta tagaataata ttgtttttga
      841 taaagcacct catcgtccgg tatctccagc aaggccacat cgagattgat gtctttaaaa
      901 gatttgcggc ctcgcttaga tggcaccttt tgttcagtga atttgaacga agcgtctttt
      961 ttttgtttca catgctcctt cgtgtcatct tttttttcca ggttttgtgg tttcggcaat
     1021 ggtttcaaca gttcctcctt tcgggagcct ttattaaaga gatctaactg ctgcataaag
     1081 taaagctaac aaatatttca aaccccatac cagaatcaaa tactacgaaa cattgattgt
     1141 ttttttacaa cgtaagtttg taaaaaatgt tggcttgagg ataaaaaaga tttgcgtctg
     1201 cggtgcggga actatgggca gcggcattgc acaagttgct gcaaaaaacg ggttcagcgt
     1261 aattcaatat gacgtggatg agcagatgct tttgaaaagc aaacacatta tcagtgagga
     1321 tcttcaaaaa ttggttgaga aaggaaaaat tacagccgct gaaaaggaag cggcgttaag
     1381 ccagcttgta tttagcacga acatcaacga ctgcatcgcc gatgttgtaa tagaggcggt
     1441 cgtggaaaat aaggaagtga aacaacaggt gtttaactcg ctttgcacga tcaatagctc
     1501 ggacacgatc ttgacgacga atacatcatc gatctctatt tcggaaattt gcagcggcgc
     1561 tgcctacgaa gaacgttttg caggtatgca ctttttcaat cctgcgcctg taatgaaatt
     1621 ggtggaagtg gtgcggggag aaaagactgc tccggcggtc atcgatgctc ttgttgaact
     1681 cgcgaagctg ttgaacaaaa cgccggtcgt ttgcaatgat tcacccggct ttatcgtcaa
     1741 tcgtgtcgcc cggcattatt acctggaggc catgaacatg gttgaacaag gcatagccaa
     1801 tgtagaaact gtagatgcca ttatggaagc gacgggcttt aagatgggcc ccttcaaatt
     1861 aatggacctc atcgggctcg atgtaaatta ttcggtgagc aacattgtat gggaagcgtt
     1921 aggtaaacct gaacgtttac gcccatcgac cttgcaaaaa aataaggtaa ctatgcgtga
     1981 attaggaaga aaaaccggga aaggttttta tgattatgaa acctccaatc cataaaccgg
     2041 cttattcagc acatgatatc agatcaggaa gataagtcaa cgactttaac ccgaacagtc
     2101 tttatcactg gggcaactgg tctcatcggc tcccatttat tgaaagcgct gacaaggcag
     2161 ggcaaaaaag taaaggcatt ataccgggcg caaaagggat tcgaacaccc ttgcgttgaa
     2221 tgggtgcgtg gagacataag cgacatttta ttactagaag aggcaatgca ggatgtgcag
     2281 caagtatatc attgtgccgc tttagtttct tttaacccaa agcaaaaaaa ggagcttctg
     2341 aaaacgaatg tagacggcac tgccaatgta gtaaatgcct gcctcgaaaa taatgtacaa
     2401 aagcttttgc acgtaagctc cgtttctgcc ctgggccggt tgcgaaatag cgcaatgata
     2461 gatgagagca tgcaatggag tgaagaaacc aataacagca cctacgggga aagcaaatac
     2521 ctggctgaga tggaagtgtg gcgtggcatt gcggaaggat taaatgcagt tatcattaat
     2581 ccaactatcg tgctgggatc gggcgattgg aacaaagggt cttcagagat ctttgaaaaa
     2641 gtttataatg agtttcctta ttattccgag ggcgtaaccg gcttcgttga tgttgacgat
     2701 gttgttaacg ccatgatcac ccttatggaa agtaacatca gtgcggatcg ttttattgta
     2761 agtgccgaaa atgtatcgta caaaactttg tttgagatga tcgccgctgc gttcaataaa
     2821 aaaccgccac aaaaaaagat cacacccttc atggcctcgg ccgtttggcg atttgccgcg
     2881 atcaaaagtt tattttccgc agacgctcca ttcatcacaa aagaaacagc ccgtacagcg
     2941 ctaatcaagg cacacttcga caatcgcaaa ttgcttgaag cagttccgtc attcaggtac
     3001 acaccgctgc gtgaatctgt tcaacggatc gcgaatgaat tcaaactgat gcacaatttg
     3061 caataaaaag caccgcctct ttcaagacga tgctttacaa ataaacgaac cccgtcaacg
     3121 atcaattata tccgtcattt tgaatcaggt tactgttcac atccatctct ctctgtggaa
     3181 tgggcaacac cagtatgtca gcatcataag gatgtccatc tatgtcgtcg ctttgcgcgc
     3241 gtttcaatgt ccatagcctg tcgccttcaa aaccgagttc gcggaaacgc tcatctatga
     3301 agtcctgtac ggtgacagaa tttaaaggtg ctgcattcga acgctctctc acggtattaa
     3361 tatcctcaag tggagtcgcc ggaccgatcg gcgcgccgcc tttgcgcaaa tttgcttcac
     3421 ctctcgtcaa atacatttct gccaaacgaa ctaccggaat aacacgatag aattccgccc
     3481 atttcatagt gtatattccg tctctgccat tgatactgta gccgctgtat acaaaatcct
     3541 ggcgaacgtc ggtgccgctg aaataatcga aatagccggg gtcaacctgt acatcgcctc
     3601 tcccaccgta agttccataa tccgcgtaaa aggtcgttaa gccattgttg cttgttccgg
     3661 cattgctttg cgacgtttgc tgaataccaa aaatatcttc agacgaattc gcggcattgt
     3721 tgaacgcctg agcaaaattt gcattaagag aataatcgcc ggattcaata acgtcgttag
     3781 ccattgttgc tgcattttcg taatcgagca tttgcatata aaccctcgaa agaaaagctt
     3841 ttgcagcacc gctcgtagcg cgaccgtcag ggttgaattc aggcagattg ttggcggcgt
     3901 ccgtcaggtc agcgatcact tgctggtaca cggcgctcac cgtggccctg gccggtctgt
     3961 cttttgttga atcgtacaca tatacaggtg caagcacaag cggaacgcca aggttcgact
     4021 cgacattgcc cgccgaatat ggctgggcaa aaaagtttac caattcgaaa taggtaatgc
     4081 cccttatgaa tttagcctct gcggcaatag cggcctgatc gcttgcatca acaacactta
     4141 ttttgtccag cacagtgttt acagtgttga tgatggcata tgagttttcc caaatacttg
     4201 tcgcaaccgg gcttgtctta tcctgtgtct tgtccgctat ttgccggtat tgggtgaatg
     4261 tgccggtcca tattacctgg tcttccttag caagcaggtc ggccattaaa atatattgct
     4321 ctccaaatgc ggagggattc tgcaatagct tgtaaccgcc gaacaagagt gcagtaacgt
     4381 ctgccgccgt cttgatttcg gtgacgttgt tttgcggttc cacattgagg tccttattac
     4441 atgcggccac aaaaattaca ggcagcagca cggctaagaa attttttatg attttcattt
     4501 ctcgattttt aaatgtttag aatttcactg ttaaacccag cgtataagtc ctcgcctgcg
     4561 gaatggtata aaagtcctgg ccgccgccga cattccctaa cacctctgtg ttaacttctg
     4621 gatcggaggg atattttgtc caggtgagga ggttataccc agccacgtat attcgcgcag
     4681 aactgagatg cattcgttgt attaggcctt tacttaaggt gtagccaagc gttgcatttt
     4741 ttagacggat atatgaaccg tcatacaacc attgtgacgc atcattatac ccgctaccaa
     4801 aaaaccatcc aacacgcggt atatttgttt ggtctcccgg cttctgccag ctatccatca
     4861 tatccgttgt ttgattatcg aaaccgttgt aaaacccggc cgacatatat acaccgcccg
     4921 cgttataa
//
LOCUS       DASQJI010000489         3724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1901386,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000489 DASQJI010000000
VERSION     DASQJI010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3724
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1901386"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..3415)
                     /locus_tag="VEV83_13420"
     CDS             complement(71..3415)
                     /locus_tag="VEV83_13420"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK46171.1"
                     /translation="MKVGCFLVLFIISFLFSNDDAAQSAPLAFSVVTGSKDVTLGKIN
                     GITQDTWGYMWFADPGNSQLVRYDGYRMKVFKHNRTDTNSINKSFFECIAADSVGNVW
                     LPFDGGVDKIASATGMATHYKLKIAVGDAIIVDHEGVVWIGGSGGLCQLDPETGKAIN
                     YSHSDKDSTTLSDGGVRVLYEDREGTIWAGSGLPFVPGNDGGLNKFNRATGKFTRYVN
                     DPADPRSIINNRVRAILEDSRGSFWIGTQGNGLHIMDRKTGTFERLTYDPKRPEKLSR
                     PPVKKGDSFDHITFIKEDISGNIWIGTYHEGIERYDPLTKKLDHFIADATGAGGFPDS
                     TTWTAFTSRDGTLWIATETSNLLYRVDPFRKSIAHISTGHTASSFAEDKNGDLWVGTE
                     GNGIFKFDQNNIEVAHFIHNPLDPFSPPENHCMLSAVPGADKIWSGSYDGIRMIDAQT
                     DKFYKVNSSSRLLEDSSQKGIVSALEDKTGIYWFASWGHGLIRLNAKDASTKQFLPDP
                     KDSTSISSAQLNHLLEDKQGRLWIVGGGGINRMDRKIEKFKKYLPETFIGSIYQDSKN
                     NIWAGTDKGLYHYNEQDDQFYPFFEDFINISTLGLGGIVEDNDHDLWLRSASSIIKLD
                     PLTKDFFIYGEKFGIGRNSMDVWGKSLKNKKGQVCFGINDGFSIFYPKELEVKDNFKI
                     FLTDFFIDNIPVLPGKQSPLQEPIEGLNNLSLRYDQNNIGFNFSALDYRDPESISYFT
                     MLEGKNSTWQKVTDEKSVQYFNLKRGKFIFHVKAFNKDGEQAEKTVAIIINPPWWQTW
                     WAFVSYAVLLMTAIWGYAKWRTKILEKEKVALETKVTERTQELKKEKEIVESTLSELK
                     STQAQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNREMVDEATEEITKGNYDE
                     VKNILNDIKDNSEKINHHGKRADAIVKGMLQHTRTSTGQKELTDINALADEYLRLSYH
                     GMRARDKNFNVTLETDFDNSVGKINVVSQDIGRVLLNLYNNAFYATSEKLEADSAHYV
                     PTVTVVTKKLDGKIEISIKDNGLGIPQNIVDKIFQPFFTTKPTGQGTGLGLSLSYDII
                     KAHGGEIKVITTEGGGSEFLIHLPIA"
     gene            complement(3451..>3724)
                     /locus_tag="VEV83_13425"
     CDS             complement(3451..>3724)
                     /locus_tag="VEV83_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK46172.1"
                     /translation="ANSAPYVPTVTIVTKKLQNKIQIIVSDNGSGISQNIIDKIFQPF
                     FTTKPTGQGTGLGLSLSYDIIKAHGGEIKVQSKEGEGSHFTIVLAG"
BASE COUNT         1007 a          817 c          670 g         1230 t
ORIGIN      
        1 aaatatcgtt aaaaatattc agtcaatcgt ttatttaata gaaccagcat gggctctcaa
       61 ataaacaaca tcaggctatt ggcaaatgaa tcaaaaattc ggagcctcca ccttcggttg
      121 ttattacttt aatctcacca ccgtgcgctt tgataatatc gtaactcaaa ctcaatccca
      181 atcctgttcc ctggcctgtt ggttttgtag taaagaatgg ttgaaaaatt ttatcgacga
      241 tgttttgcgg aataccaagg ccattatctt ttatacttat ttcaattttg ccatccagct
      301 tttttgtgac aacggtgact gtgggcacat agtgcgcgct gtcggcttcg agcttttcgc
      361 ttgttgcgta aaatgcattg ttgtacaaat tcaacagcac cctcccaatg tcctgcgaaa
      421 cgacatttat tttgccaaca gaattatcaa aatctgtctc caatgttaca ttgaaatttt
      481 tgtctcttgc gcgcatgccg tgatagctga gccttaaata ttcgtctgcc aatgcattga
      541 tatcagttaa ttctttctgg cctgtactgg tgcgtgtatg ttgaagcatg ccttttacaa
      601 tagcgtctgc gcgtttgccg tgatggttga tcttttctga attgtctttg atatcattta
      661 aaatattttt tacttcatca taatttcctt tggtaatttc ttctgtggct tcatcaacca
      721 tttcccggtt tacttccgaa aaattattga cgaaattcaa tggattttgt atttcatgcg
      781 cgatgcctgc agtgagctca ccaagcgaag ccattttttc tgattggata agttgggctt
      841 gcgtggattt caactcagac aaagtgcttt ccactatttc tttttctttt tttaattcct
      901 gagttctttc ggtaactttt gtttcgagtg caactttttc tttttctaaa attttggttc
      961 gccattttgc ataaccccat attgccgtca tcaataaaac ggcatatgaa acaaaggccc
     1021 accaggtttg ccaccacggt ggatttataa taatcgccac tgttttttcc gcctgctccc
     1081 catctttatt aaaggctttt acgtgaaata taaatttgcc ccgcttcaaa ttaaaatact
     1141 gaacactttt ttcgtctgtt actttttgcc atgtgctatt cttcccttca agcatagtaa
     1201 aataacttat gctttcggga tcacgataat ccagagctga aaaattaaaa cctatattgt
     1261 tttgatcata ccttaagctc aaattattta gtccttcaat cggttcctgt agcgggcttt
     1321 gtttaccggg caagacagga atattatcga taaaaaaatc agtaagaaaa attttaaaat
     1381 tgtcctttac ctcaagttcc ttgggataaa agatagaaaa cccatcatta atgccaaagc
     1441 atacctggcc ttttttgttt ttcaaagatt tcccccatac gtccatgctg tttcttccaa
     1501 tgccaaactt ctctccataa ataaaaaaat ctttagttaa gggatccagt tttatgattg
     1561 aagaagcaga ccttagccaa agatcatgat cgttatcctc gacaattccg cccaggccaa
     1621 gtgtactaat atttatgaag tcttcaaaaa agggataaaa ctgatcatct tgttcgttat
     1681 aatgatacag gcctttatct gtgcctgccc aaatattgtt ttttgaatcc tggtaaatag
     1741 atccgataaa agtttcaggc agatattttt tgaacttctc gattttacga tccatcctgt
     1801 ttatgcctcc tcctccaaca atccacaacc tgccctgctt gtcttctaag aggtggttca
     1861 actgggctga gcttattgat gtagaatctt ttggatcagg aagaaattgt ttagtagacg
     1921 cgtctttagc attcaatctt attaaaccat gcccccagct tgcgaaccag taaattcctg
     1981 ttttgtcttc taatgcactg acaatgccct tctgagatga atcttcaagt aatctactac
     2041 tactgttaac cttgtaaaat ttatcagttt gcgcatcaat catcctgatt ccatcataac
     2101 ttcctgacca aatcttgtca gctccaggta cggcacttag catacaatga ttttcgggcg
     2161 ggctaaaagg gtccaggggg ttgtgaatga aatgggccac ttcgatatta ttctggtcaa
     2221 atttaaaaat gccattcccc tctgtaccta cccataaatc accatttttg tcctcagcaa
     2281 aactgcttgc agtgtggcct gtagatatat gggcaattga tttgcgaaaa ggatcaacac
     2341 gatacagaag gttactcgtt tcagtggcga tccataacgt gccgtcacgg gaagtgaaag
     2401 ctgtccacgt tgtgctatca ggaaagccgc cagcccctgt tgcatccgca ataaaatgat
     2461 ctagtttttt tgtgagtgga tcataccttt ctattccttc atgataagtg ccaatccaga
     2521 tattaccgga tatgtcttct ttaataaaag tgatatgatc aaaggagtct ccctttttga
     2581 caggcggcct gcttaatttt tcggggcgct tcgggtcgta tgtaagcctt tcaaatgttc
     2641 ctgttttacg atccataata tgtaagccat ttccctgggt acctatccag aaactacccc
     2701 tgctatcttc gagaattgca cgtacccggt tgttaataat gctgcgcgga tcagcaggat
     2761 cgtttacgta acgggtaaat tttccagttg ccctgttgaa tttgtttaag cctccatcat
     2821 tacccggcac aaaaggcagg ccactgcctg cccatattgt tccttctcta tcttcatata
     2881 acacgcgtac cccgccatcg ctaagtgttg ttgaatcttt atcgctatga ctatagttaa
     2941 ttgctttgcc cgtttcaggg tccagttgac aaaggccgcc actcccacct atccaaacaa
     3001 caccctcatg atctacaata atagcatccc cgacggcgat ttttagttta tagtgtgtag
     3061 ccatacctgt ggcggaggct attttatcta ccccaccatc aaagggaagc catacatttc
     3121 ctacactatc tgcagcaata cattcaaaaa aacttttgtt gattgaattg gtatcagtac
     3181 ggttgtgttt aaaaactttc atacggtaac catcatatct taccaattgg ctgttacccg
     3241 gatcagcaaa ccacatataa ccccaggtat cttgtgtaat gccatttatt ttcccgaggg
     3301 taacatcttt actgcctgtt acaacactaa aggcaagcgg tgcggattgc gcagcatcat
     3361 cgtttgaaaa taaaaaggag ataataaaaa gtacaaggaa gcagccaacc ttcatatagg
     3421 tatttgatcg aaaattaagc aattaaattg tcatccggca agtacgatag tgaagtgtga
     3481 tccttctcct tctttgcttt gtactttaat ctcaccaccg tgcgctttga taatatcata
     3541 actcaaactc aaacccaatc ctgttccctg gcctgtcggt ttagtggtga agaacggttg
     3601 aaaaatttta tcaattatat tttgcgaaat gccggagccg ttgtctgaga caatgatttg
     3661 aattttattt tgcaattttt ttgtgacgat agtgactgtt gggacgtagg gcgcgctatt
     3721 agct
//
LOCUS       DASQJI010000490         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_57949,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000490 DASQJI010000000
VERSION     DASQJI010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57949"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1335
                     /gene="hisD"
                     /locus_tag="VEV83_13430"
     CDS             <1..1335
                     /gene="hisD"
                     /locus_tag="VEV83_13430"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HYK46173.1"
                     /translation="AKGTWSTGYFGCTDRKDDRMMQVIKFPSKKDYEQLLKRPLHDYR
                     AVRKTVQAILDNVRFNGDAAVKQYTQQFDQISLKDFHLQANEWDAADSIDESLKKAID
                     VAIKNISTFHRSQFENVTKVDTMPGITCWRKSVPIEKVGLYIPGGTAPLFSTVLMLAV
                     PARIAGCNEIIVCTPPQTDGNVHPAILYAARQTGVRKIFKIGGAQAIAAMAFGTETIP
                     KVHKIFGPGNRYITCAKMLVAAEGVAIDMPAGPSEVAILADETCDPEYVAADLLAQAE
                     HGKDSQVLLVSTDERVIDQTKDSLQRQFSQLPRWEIVEAAVKNSKAILVQTLDDALEL
                     INQYAPEHLIIACRDAEAIAENVRSAGSVFLGNYSPESVGDYASGTNHTLPTNGFAAA
                     YSGVSLDSFFKKITFQQVTKEGLSNIAETVQVMAEAEGLRAHANAVSIRLKN"
     gene            1337..>1794
                     /locus_tag="VEV83_13435"
     CDS             1337..>1794
                     /locus_tag="VEV83_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK46174.1"
                     /translation="MSSFRLENIVRKNIRELVPYSSARSEFEGKAKVFLDANENSLGS
                     VAQENFSRYPDPLQKELKQKISEIKHIKTENIFVGNGSDEAIDLLIRAFCNPSIDNIL
                     ICPPTYGMYQVCADINEVAVKKVLLTREFGLNIEAIKKDIDEHTKLIFICS"
BASE COUNT          543 a          375 c          434 g          442 t
ORIGIN      
        1 gctaaaggaa catggagcac agggtatttt ggttgcaccg atagaaaaga tgatcgtatg
       61 atgcaggtga tcaaatttcc atccaaaaaa gattatgagc agttactgaa acgtcctctg
      121 cacgattata gagccgtaag aaaaactgtg caagccattc tcgacaatgt gagatttaat
      181 ggagacgcgg cagttaaaca atatacgcag caattcgacc agatatcatt aaaagatttc
      241 cacctgcagg ctaatgaatg ggatgctgca gattcaatcg acgagagctt gaaaaaggcg
      301 atcgatgtgg ctatcaaaaa catttccacg ttccatcgat cacagtttga aaatgtaacg
      361 aaggttgaca caatgccggg cataacttgc tggcgaaagt cagtgccaat tgaaaaggtt
      421 ggcctgtata ttcccggagg aactgcgcct cttttttcca cggtgctgat gcttgcggta
      481 ccagcgagga tcgcaggttg caacgagata atcgtttgca caccaccgca aacagatggg
      541 aatgttcatc ctgccatctt atacgcagcg cggcaaacag gtgttcgaaa gatctttaag
      601 atcggtggag cgcaggcaat tgctgcgatg gctttcggca ctgagaccat tcccaaagtg
      661 cataagatct ttggtccggg caaccggtac attacctgcg ctaaaatgct tgtagctgct
      721 gaaggcgtcg cgatcgatat gccggcgggt ccttcagaag tggcaattct tgcagacgaa
      781 acatgcgatc cggaatatgt tgccgccgat cttttagcgc aggcagagca tgggaaagat
      841 tcgcaggttc ttcttgtcag caccgatgaa agagtgattg atcaaacaaa agactctttg
      901 caaaggcagt tttctcaatt gccgagatgg gaaattgttg aagcagccgt gaaaaacagc
      961 aaggcgatcc tcgttcaaac attggatgat gctcttgaat tgatcaatca atacgcacct
     1021 gaacatttga tcatcgcatg cagggatgca gaagcaatcg cagaaaatgt tagaagtgcc
     1081 ggttctgtgt tcctgggaaa ttattcgcct gaatctgttg gcgactacgc atccggaacc
     1141 aatcacactt tgcctacaaa tggttttgca gcggcttaca gcggcgtttc tttggatagt
     1201 ttttttaaaa aaattacgtt tcaacaagta acaaaagaag gcttaagcaa tatcgcagaa
     1261 actgtgcagg tgatggctga ggcagaaggc ttgcgcgcac atgccaacgc cgtatctata
     1321 cgattaaaaa attaaaatga gttcgttccg cctggaaaat atcgtaagaa aaaatataag
     1381 ggaactggtg ccttattctt cagcacgctc tgagtttgaa gggaaggcaa aagtgtttct
     1441 cgacgcaaac gagaacagcc tcgggtcagt ggcacaagaa aatttcagcc gttaccctga
     1501 tcctctgcag aaagagctga aacaaaagat cagtgaaata aagcacatca aaaccgaaaa
     1561 tatttttgtc ggtaacggaa gcgatgaagc gatcgacctg ttgatccgcg cgttttgcaa
     1621 tccttcaatc gataacattt taatttgtcc acccacttac ggcatgtacc aggtgtgcgc
     1681 cgatatcaat gaggttgcag ttaaaaaagt tctgcttacg cgtgagttcg ggttgaacat
     1741 cgaagcaata aaaaaggata tcgatgaaca cacgaagctg atttttattt gctc
//
LOCUS       DASQJI010000491         2767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1901583,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000491 DASQJI010000000
VERSION     DASQJI010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1901583"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VEV83_13440"
     CDS             complement(<1..674)
                     /locus_tag="VEV83_13440"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYK46175.1"
                     /translation="MANYDNDWDRNRRGFNQQWNDDDPYGNQNYSNDYNRRNERNFRD
                     MPYGGSSDYDYGRSRRSNYGNMSGTGDYDNSYGYNRDIYRNSNMGGRSSSDYRYGSEG
                     SDYNYGRDDYRRGNDRDWWDKTKDEVSSWFGDDDAQRRRRMDERRGDYRGKGPKGYTR
                     SDERIKEDVNDRLSDDSSLDASDIEVSVQNCEVTLTGTVNTRWEKRRAEDCAESVSGV
                     KNVENRL"
     gene            complement(954..1988)
                     /locus_tag="VEV83_13445"
     CDS             complement(954..1988)
                     /locus_tag="VEV83_13445"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK46176.1"
                     /translation="MQHNVARKFKTLALVCVFTSFAGVIYELIDEDQVDFSSVMFGLP
                     LGLVFGLMELFVFPRAEARFREWPFTKLLLFKTFSYTALIYVVTLLVITIVGLIDGHD
                     IHELMPYVISIEQWTLVLYTIVVYGLLVFFIQINRLLGQGVLWKFVLGKYHKPREEER
                     IFMFLDMKSSTTIAERLGHVRFYALLNDLFREISEPVLQTKAEIYQYIGDEVVLTWNL
                     EEGLRNANCLRIFFMFRENMRRNSDDYFKNFGVRPEFKAGLHFGKVISAQIGDLKREI
                     AYNGDVLNTTSRIQNECNKYKRNCLVSGALMNRLTSTNGFEWERIDAVTLRGKETEME
                     IFSVDATGGF"
     gene            complement(2357..>2767)
                     /locus_tag="VEV83_13450"
     CDS             complement(2357..>2767)
                     /locus_tag="VEV83_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46177.1"
                     /translation="EHNPQGPPPLPHDSAGPILIGDIITGVVNINSQNKIVWRSCFIK
                     AIDPPTVSANTSLAVVGQKALHIIYSKTAVNNTESLENVSVAADGSFSSSPIISMNLR
                     YRFVVGMARQISSTSIMLPCIKDDKLAFAKIEIE"
BASE COUNT          727 a          640 c          576 g          824 t
ORIGIN      
        1 agacggttct caacgttctt cacgcctgac acactttcag cacaatcttc ggcacgccgt
       61 ttttcccaac gtgtgttcac tgtgcctgta agtgttacct cgcaattttg aacagacact
      121 tcgatatctg aagcgtccaa actggagtcg tcactcaaac ggtcgttcac gtcttctttt
      181 atcctttcgt ctgaacgtgt atagcctttc ggtcctttgc cgcgataatc tccgcgcctt
      241 tcatccatac gcctgcgccg ttgagcatcg tcatctccaa accacgatga tacttcatct
      301 tttgttttgt cccaccaatc gcggtcattt ccccgccgat aatcgtctcg tccatagttg
      361 tagtcagaac cttctgaacc atagcggtag tctgaagagc tgcggccgcc catgttactg
      421 ttccggtaaa tgtcgcggtt gtacccgtaa ctattgtcat aatctcctgt gccgctcatg
      481 ttgccgtaat tgcttctcct gctgcggcca tagtcataat ctgaggaacc accataaggc
      541 atgtccctga aattgcgttc atttcttcga ttatagtcgt tgctgtagtt ttggtttcca
      601 tatgggtcgt catcgttcca ttgctggttg aaacctcgtc ggtttctatc ccaatcatta
      661 tcataatttg ccatagtgtg aaattttaat gatgaaagaa taaggataac cagaatatgc
      721 gtaaaatttc atgccacgca cggctcttac gtcatcgcat atttcacttt aactgttttg
      781 ttgaaattca tgataaaagt ccacaagctg aaacggcatc caatttgagc gcaaaacaat
      841 tgctggttgc ttatgaagtt tgaagtttga tgtttgaagt ttattgggca actggttaat
      901 tcggttattt ggaaaggctt tgcttatcgt aattgatgcg atgctttcat atttcagaat
      961 ccgccggttg catcgacact aaatatctcc atctccgttt cttttccccg caaggttaca
     1021 gcatcgatcc gttcccattc aaaaccattc gtgcttgtaa ggcggttcat taatgcgcct
     1081 gacacgaggc aattccgttt gtatttgttg cattcatttt gaattcttga ggtcgtgttc
     1141 aggacatcgc cgttgtaagc gatctcacgt ttcaagtcgc cgatctgcgc gcttataact
     1201 ttgccaaaat gcaagcctgc tttaaactcc ggccgcacgc caaaattttt aaagtaatcg
     1261 tcgctgttcc tgcgcatgtt ttcccggaac ataaaaaaaa ttctcaggca attcgcattc
     1321 cgaagtccct cttcaagatt ccatgtcagc actacctcgt cgccgatgta ttgatagatc
     1381 tcagctttcg tttgaagaac gggttctgag atctcgcgga aaaggtcgtt gagcaacgca
     1441 taaaatcgaa cgtggcccag gcgctctgca attgttgtcg atgatttcat atcgaggaac
     1501 ataaagatcc tttcttcctc gcgcggctta tgatattttc caagcacaaa cttccataaa
     1561 actccctgtc ccaacaggcg gttgatctgt ataaagaata ccagcaagcc atagacgaca
     1621 atggtgtaaa ggacaagtgt ccactgttca atcgatataa cgtatggcat gagttcgtga
     1681 atatcgtgcc catcgattaa cccgacaatg gttatcacga gcaaggtgac aacataaatg
     1741 agagcagtgt acgagaaagt tttaaacagc agtaattttg tgaacggcca ttccctaaaa
     1801 cgtgcttccg cccttggaaa aacaaataat tccatcaggc cgaagaccag gcctaaagga
     1861 agaccgaaca tcacactact aaaatcgacc tggtcctcgt caatgagctc atagatcacg
     1921 ccggcgaaag atgtaaaaac gcatactaag gctaatgtct taaattttct ggcgacgtta
     1981 tgttgcatgt gtgaagaaat tcttatgatt cgacaatcaa atttggaaat gatcttgatt
     2041 tcctgcatgg caatgatcat ttttaagagc cgggattgaa ggtgcatttt cttgtgcgga
     2101 tggaatgtcc tggtttccgt gcgaaggatt gtttacaatt cgcctcattc aatatttgtc
     2161 cccttttcga cccgtatctt ttgcaaaagt ctattcgtta gtggcgtggc tttgctgcgt
     2221 tcttctaacg gaacacgtac aaaagcaaca aaaaacaatc gttataacac cagcactaga
     2281 atgatgtaag ataatgtaaa cattccagcg cggcgggaga agtaaagcgg gctatcatgt
     2341 ggatgaggca accaacttat tctatctcaa tctttgcaaa tgctaattta tcgtccttaa
     2401 tgcaagggag catgattgat gtgctgctta tttgccttgc catacctact acaaacctgt
     2461 atcgtaagtt catggaaatt attggtgagg aagaaaacga gccgtccgcg gccaccgata
     2521 cattttccag actttcagtg ttattgacag cagtctttga ataaataatg tgcagagctt
     2581 tttgacccac aactgcaaga gatgtatttg cggaaacagt cggtgggtca atggccttaa
     2641 taaaacagct ccgccacacg attttattct ggctgtttat gttaacaaca ccggtgataa
     2701 tatctccaat caatattggc cctgcagaat catgtggcaa agggggtggg ccttgcggat
     2761 tatgctc
//
LOCUS       DASQJI010000492        11709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_979878,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000492 DASQJI010000000
VERSION     DASQJI010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11709
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979878"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VEV83_13455"
     CDS             complement(<1..655)
                     /locus_tag="VEV83_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYK46178.1"
                     /translation="MSLYLQINNLSCIAFKNIAHAVITRYHLLSIVTATFFISTFSLA
                     QKTATVSGKVLSENDRPLARVTIELLNGFKRTASNDSGFFTIELPVNKPVALVFTYTG
                     YAPVQKNFNLNEGETEAMTIKMSPLENKLPGVTVKDETQRQQPGLININPGNALVNPT
                     PLSNIESLIKIIVGSNNELTSQYSVRGGSYDENLIYVNDFEIYRPFLVQSGQQEGLSF
                     "
     gene            663..2000
                     /locus_tag="VEV83_13460"
     CDS             663..2000
                     /locus_tag="VEV83_13460"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HYK46179.1"
                     /translation="MNYLVKDASIVNENKIFRSDVLIKDGRIEKIAPNISAKYAVKEV
                     NASGLFLFPGVIDDQVHFREPGLTQKATIYTESKAAVAGGVTSFMEMPNTQPPAFTQR
                     LLEDKYQIAQHTSLANYSFYMGTSNDNYDEVMRTNEKRKNVCGVKIFMGSSTGNLLVD
                     NPLALDKIFSNSELLIATHCEDEKIIRENLARLKSEKDVLEPSDHPLIRSDEACFASS
                     FRAIQYAKKYGSRLHILHISTEKELQLFSNLLPLKDKKITAEVCVHHLHFTSDDYERL
                     GNKIKCNPAIKAPNNKAALWNALLDDRLDVIATDHAPHTLEEKQLPYEKAHAGLPLVQ
                     HALMLMLYYYREGKVTLEKIAQKMSHAVATCFEIEDRGFIRENYFADLILVDMNKSFT
                     IKQENILYKCGWSPLEAFTFPASVTHTFVNGNLVYENNTFDESNKGMRLQFTR"
     gene            2028..3344
                     /locus_tag="VEV83_13465"
     CDS             2028..3344
                     /locus_tag="VEV83_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HYK46180.1"
                     /translation="MHIDKTTLYDLSIFDYNEEQSVLHHVNFCRTVNGRHWLEYYLKH
                     PLPSLKDVIDRQRLLQCIIAVHSSWPETITNGSVLMIEKFYESQIGSIPSDSNFVNAA
                     VYKIFNAPDFSLVRYSVTHFIDFLQGMSGIYDLLQKEGNPVALDLMLTRIQMLLSKPV
                     VQQMIQHKNPKQLSNSNVMQFGRFVRDGYKDESRELIEIYSKLDAFYSLASACMKYNF
                     SFPVFSPETLPDFEVKKLYHPLLPNPVPYDIILTPDKNFLFLTGANMAGKSTFIKAIG
                     VATYLAHIGMGVPAESMQLNFFDGLISNIHVIDNIIKGESYFFNEVQRIRKTIEQISD
                     GKNWLVLIDELFKGTNVQDAMKCSSTVIEGLLKVDNAVFILSTHLYEIGESLRQYPNI
                     QFRYFETEVKDEQLYFNYNLKEGISNDRLGYLILKKEGVVEMLEKL"
     gene            3480..4664
                     /locus_tag="VEV83_13470"
     CDS             3480..4664
                     /locus_tag="VEV83_13470"
                     /inference="COORDINATES: protein motif:HMM:NF022818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3179 domain-containing (seleno)protein"
                     /protein_id="HYK46181.1"
                     /translation="MKGWLFVIGFLFLLAVEILRVYFIMPFPGSQQSDTIDVAYFINK
                     NIWLLRSIGILIMIFPFFHILKYCRVWKKIVMFIAVLFYAVVAYAFNFKFLADKMFYQ
                     PKEKILLGAAKDATNKNKLVIGVAINGEAKAYPIEIIGYHHQVRDTIGGEEVMITYCT
                     VCRTGRAFSPYINGELQDFRLVGMDHFNAMFEDAETKSWWRQETGTAVAGPLKGTSLK
                     EIPSSQMALSDWLALHPNSFVLQPDPNFKEQYADLEGYDVDTLKSGLEKRDSASWKMK
                     SWVIGVNLNNHAKAYDWNDLVKKKMIEDTLQDVPLLLTMQPTERTFYAFNRRTTNGTL
                     HFIYDDSTQSLRDQETKSTWNIDGNCIDGSMKGYRLKTVQAYQEFWHSWKQFHPGTEI
                     YK"
     gene            4853..5344
                     /locus_tag="VEV83_13475"
     CDS             4853..5344
                     /locus_tag="VEV83_13475"
                     /inference="COORDINATES: protein motif:HMM:NF024294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46182.1"
                     /translation="MKHKHLLAALFLLTCTYVKAQTLESWTWDTYKMKFKAPDNMRVV
                     KNNADVFEATNDNITMDIYPRKGENLTYDGMKNAIIGWARQSDLVYNTYNSSGKAQPI
                     YLDDVNGYWGCAIDGKKSGFPTSMLLLVDPDYPDISFYVWLSYANEYYHDAVAILDSF
                     EPS"
     gene            complement(5356..6426)
                     /locus_tag="VEV83_13480"
     CDS             complement(5356..6426)
                     /locus_tag="VEV83_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HYK46183.1"
                     /translation="MNETDILRALSGVQEPDLGKDIVTLNMVKDVSITGSTVSFTIVL
                     TTPACPLKELIRKESIEAIHKQVDESATVTINFTSDTTSRRGDTGAVLPGVKNIIAVV
                     SGKGGVGKSTVAANLALALSLCDAKVGLMDADIYGPSVPIMFGVRGERPMMRDVNGKG
                     MIIPLERYGIKLMSIGLLVDEKSAVVWRGPMASSAIRQFVTDVDWGDLDYLVIDMPPG
                     TGDIHLTLMQTVPVTGAVIVTTPQDVALADAKKGIAMFAQAQLNVPIIGLVENMAYFT
                     PAELPEKKYYIFGKEGGKRLADEYDLTLLGQIPIVQSIREGGDAGIPAMMGDDAISRN
                     AFEEFAALTARSISVVNAQKAK"
     gene            6633..7280
                     /locus_tag="VEV83_13485"
     CDS             6633..7280
                     /locus_tag="VEV83_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYK46184.1"
                     /translation="MKKSLRYLVLTCLVFFSLHTFAQNKTPDKDTVVQLYGVVMSADS
                     LRGLEATSVIVEGTGRGTLTNSEGVFSIAVLKGDRIRFSSIGFKDKTITIPHNLQGNQ
                     YSVIQLMVNDTAYLPATILKPRPTRAQFERDFVNAEVPADALEIARRNNDEATRKALL
                     MSLPADGQEAYKVQVQQQAQRYYYAGQQPPINLFNPAAWAEFIQAWKRGDFKRNP"
     gene            7345..8802
                     /locus_tag="VEV83_13490"
     CDS             7345..8802
                     /locus_tag="VEV83_13490"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase"
                     /protein_id="HYK46185.1"
                     /translation="MKKLIAICFLLISFKAFPQDNNLSVTKHQLKVGGEVINYTATAG
                     FMMMKDENDSLKAKVFFVAYTKDGETDISKRPVLFAYNGGPGSSSVWLHMGAIGPKKV
                     VLGDKGEMLQPPFKYGDNEYTWLDKTDIVFIDPMMTGFTRPSKNSDKSEFTGFENDTR
                     FVGDFIRLYTTKNSRWSSPKFIGGESYGTTRSAGVASYLQERYGMYLNGVIMISAILD
                     FGADETDRGNDRPFPLQLPTFSATAWYHHKLGTQYPDLKTLLGEVENFSTNQYASALL
                     KGDAITDAERNEIADKLHQYTGLSKDYILQSNLRFYVGRFNKELLRDQALTVGRLDSR
                     FTGYDYDEAGEGFEYDPSYDKTIYGPFAAVVNDYIRRELKFESELPYEILTGRVGSWP
                     LANDRYLNVAESLRDAMTKNPFLKVWIAQGYYDMATPYFATENVVAHMFLKKDLRQNI
                     HLTFYEAGHMMYINKPSLAQLKNDFSSFITSALPN"
     gene            8942..9946
                     /gene="pfkA"
                     /locus_tag="VEV83_13495"
     CDS             8942..9946
                     /gene="pfkA"
                     /locus_tag="VEV83_13495"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HYK46186.1"
                     /translation="MSSNVTKIGVLTSGGDSPGMNAAIRAVVRTSIYRGLDVFGIMRG
                     YNGMIEDDISQMNSRSVANIIQRGGTILKTARSKDFYSEEGRKRAYENLQKRGIDGLV
                     VIGGDGSFTGAYKLSKEFNIPCTGIPGTIDKDLYGTDFTIGFDTAVNTAVSAIDKIRD
                     TADSHDRLFVVEVMGRHAGYIALHSGIATGAENILMPEVNTTLDEMIASLGEQEKRKK
                     LVNLVVVAEGYQPDPSNPDIKGANEVARLVNEKLKGLETRVTILGHIQRGGPPTCIDR
                     FIASRMGYHAVQCLIEGRHNVMVGILHNNMHYTPLEIAIREKQRISEDWLNIVKILAS
                     "
     gene            9996..11489
                     /gene="pyk"
                     /locus_tag="VEV83_13500"
     CDS             9996..11489
                     /gene="pyk"
                     /locus_tag="VEV83_13500"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HYK46187.1"
                     /translation="MSNGISKYLHTGMDKQAGIEHTFHRTKIVATVGPSCDTYEKLLE
                     LVKAGVNVFRLNFSHGTLEDKEKMLGLIGRLNEEEPYNITTIADLQGPKLRVGDIQNG
                     LLEINNGDILCFTSKEKVLGTKEKIYVSYPNLHEDVKVGDKILIDDGKLEVVVIETTA
                     AGDVKVAVTYGGILLPKKGLNLPDTDISLPAITEKDVVDLAFIMKHEVDWVALSFVRK
                     AEDIIDLKQRLAANNCNTKVIAKIEMPSALKDLRNIILESDAVMVARGDLGVELPVEK
                     VPMAQRDIIRKCIHRARPVIVATQMMESMIDRVKPNRSEITDVANAVLEGADAVMLSG
                     ETATGKHPALVVETMRRIILEVEKTEYRYNREEDLKPLPHSPSFLSDAICYNACKIAK
                     DANADALIGMTQSGYTAFMLSSYRPQSPLYIFTKLKILVNQLSLSWGVRAFYYDEEVS
                     LDDIIFDQINILKERGFVKPGDVVINTGSVPVHLHLPTNVLKITKVD"
     gene            complement(11486..>11709)
                     /locus_tag="VEV83_13505"
     CDS             complement(11486..>11709)
                     /locus_tag="VEV83_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46188.1"
                     /translation="VAYDPNGINVLSDSAAAGKEQKKRRQFFHTERLKTIAVRMTGNI
                     RSLKLITHHSSLISCIFYTKKSPDFRGRI"
BASE COUNT         3370 a         2501 c         2730 g         3108 t
ORIGIN      
        1 tgaaacttaa accttcctgc tggccacttt gtacaagaaa cggcctgtag atctcaaaat
       61 catttacgta gatcaggttc tcatcataac tgcctccccg cactgaatat tgggaagtga
      121 gttcattgtt gcttccaacg atgatcttta tcaggctctc gatgttactc agcggcgttg
      181 gattgacgag cgcgtttcca ggattaatat tgatgagccc tggttgctgt cgctgcgttt
      241 catcttttac tgtcactcct ggcaacttat tttccagtgg cgacattttt attgtcatcg
      301 cttccgtttc accctcattt aaattaaaat ttttttgaac gggcgcataa cctgtgtaag
      361 taaaaaccag cgcgaccggt ttgtttacag gtaactctat cgtaaaaaat ccactatcgt
      421 ttgaagcggt tcttttgaag ccgttgagta attcaattgt cacacgtgcc aggggccggt
      481 cgttctcact caagactttc cctgatacgg ttgcggtttt ttgagcaagt gagaaggtgc
      541 tgataaaaaa agttgcagta acgatcgata aaagatgata gcgggttatt acggcgtggg
      601 caatattttt aaaagctatg cagctaagat tgttaatttg caaataaaga ctcacacgct
      661 gtatgaatta cctggttaaa gatgcaagta tagtgaacga aaataaaatt tttcgcagcg
      721 atgtgttgat caaagatggc cgcattgaaa aaattgctcc aaacataagt gcaaaatatg
      781 ccgtaaagga ggtcaatgct tcgggattgt ttttgtttcc cggtgtcatc gacgaccagg
      841 tccatttcag ggagcccggt ttaacacaaa aggcgacgat atataccgaa tcaaaagcgg
      901 ccgttgcagg cggcgtcacc agttttatgg aaatgcccaa cacgcaaccg cccgcattta
      961 cccaacgatt gctagaggat aaatatcaaa tcgcgcagca cacgtcgctt gcaaattatt
     1021 ctttttacat gggcacgagc aacgacaatt acgatgaggt gatgcgcaca aatgaaaagc
     1081 ggaaaaacgt ttgcggggtg aaaattttta tgggttcgtc taccggaaac ctgctggtgg
     1141 ataatccgct ggccctcgac aaaatttttt caaattcaga attgctcata gccacgcact
     1201 gtgaagacga aaagatcatc cgggagaact tagcaagatt gaagtcggag aaggacgtgc
     1261 tcgaaccatc agatcacccg ttgataaggt ctgatgaagc ctgctttgca tcttcattcc
     1321 gggcgattca atatgcaaaa aaatacggca gccgattgca tatcctgcat atcagcaccg
     1381 aaaaagaatt gcaattgttc agcaacctgc ttccgctaaa agacaaaaag ataacggctg
     1441 aagtttgtgt gcatcatttg cattttacaa gcgatgatta tgaacgactg ggcaataaga
     1501 tcaaatgcaa tcccgctatc aaagcaccga ataacaaggc cgcattgtgg aatgcactgc
     1561 tcgatgacag gcttgacgtt attgcaactg atcatgcgcc gcatacctta gaagagaagc
     1621 aacttcctta tgaaaaggcg cacgccggct taccgctcgt gcaacatgcc ttaatgctga
     1681 tgttatatta ttacagggaa gggaaagtaa cattagaaaa aatcgcgcaa aagatgagtc
     1741 atgctgtggc aacatgtttt gaaattgagg accgcgggtt tattcgggaa aattatttcg
     1801 cagatcttat cctggttgat atgaacaagt cgttcaccat aaagcaggag aacattctgt
     1861 acaaatgtgg gtggagtcct ttggaggcat tcacgtttcc tgcgtcggtg acacacacat
     1921 ttgtgaacgg caacctcgtt tatgaaaaca acacatttga tgaatctaat aaaggaatga
     1981 ggttgcaatt tacacgatag tcaaaactca ctttagggct gggccgcatg cacatcgata
     2041 aaacaacact atacgatctt tccatcttcg attacaacga ggagcagtcg gtgttgcatc
     2101 acgtgaactt ttgcagaact gtaaatggca gacactggct tgaatattat ctgaaacatc
     2161 cgctgccttc attaaaagat gtcattgacc ggcagcggtt gctgcagtgt atcatagcgg
     2221 ttcattcatc gtggcctgaa acaattacga acggctcggt gttgatgatt gaaaaattct
     2281 acgagtctca aataggcagc attccatctg attcaaattt tgtaaatgct gctgtgtata
     2341 aaatttttaa tgcgccggat ttttccctcg tgcgatattc ggtaacgcat ttcatcgatt
     2401 ttttgcaggg catgtctggc atttatgact tgctccagaa agaaggaaac ccggtcgcat
     2461 tggatttgat gttgacccgt attcaaatgc ttttgtcgaa acctgtcgtg cagcaaatga
     2521 tccagcataa aaacccgaag caactgtcaa atagtaacgt aatgcaattt ggccgtttcg
     2581 tccgcgacgg ttataaagat gagtcgcggg agctgataga aatatacagc aagctagatg
     2641 cattttattc gctggcgagc gcctgcatga aatacaactt ttcatttcct gtctttagtc
     2701 cggaaacctt gcctgacttc gaggttaaaa aactctatca tccattgctt ccaaacccgg
     2761 tgccgtatga tatcatcctg acgccagata aaaatttttt attcctgacg ggcgcgaaca
     2821 tggccggcaa aagcactttc ataaaagcta tcggtgtggc aacttatctc gcgcacatag
     2881 gcatgggcgt gcccgcagaa agcatgcagc tgaatttttt tgatggactc atcagcaaca
     2941 ttcatgtcat agataatatt attaaaggcg aaagttattt tttcaacgaa gtgcagcgta
     3001 ttcgcaaaac gattgaacag atcagcgatg gtaagaactg gctggtgctg atcgatgaac
     3061 ttttcaaagg aacgaatgtg caggatgcga tgaaatgcag cagcaccgtg attgagggct
     3121 tgctcaaagt tgacaatgct gtttttattc tttcgacgca tttgtacgag atcggcgaat
     3181 cgctcaggca gtatccaaac atccagttca ggtattttga aaccgaagtg aaagatgaac
     3241 aattgtattt taattacaac ctcaaagagg gaataagcaa cgaccggctc ggttatctca
     3301 tcctcaaaaa agaaggagtc gtcgagatgt tggagaagtt gtagaagtaa gtttgaggtt
     3361 tgaagtttga ggtttgaggt tacaggttca ggtttcaggg ttcaggttca ctttcacaat
     3421 tcacaattca caattcacca ttgaccattc acatctatat ttgacgctca ttcggattca
     3481 tgaagggatg gctgttcgtg atcggctttt tgtttttgct cgcggtcgaa atattgcggg
     3541 tttattttat catgcctttt ccgggaagcc agcagtctga cacgatcgat gttgcttact
     3601 tcatcaataa aaatatttgg ttgctcagat cgatcggcat tttaattatg atcttcccgt
     3661 tctttcatat cctaaaatac tgccgtgttt ggaaaaagat cgtcatgttt atagcggtgt
     3721 tgttttacgc cgttgttgca tacgctttca atttcaaatt cctggctgac aaaatgtttt
     3781 atcagccaaa agaaaaaatt ctcttaggcg ccgcaaaaga tgctaccaat aaaaataaat
     3841 tggtgatcgg tgttgcaata aacggtgaag caaaagcata tcccattgag atcatcggct
     3901 atcatcacca ggtgagagat accataggag gtgaagaggt gatgatcact tattgcactg
     3961 tttgtcgcac cgggcgtgca tttagtccgt acatcaatgg ggagttgcag gattttcgtt
     4021 tggtggggat ggatcatttc aacgcgatgt ttgaagacgc tgaaacaaag agttggtggc
     4081 ggcaggaaac cggcactgcg gtcgccggac ctctgaaagg aacgtcgctc aaagagattc
     4141 cttcatcaca gatggcattg agcgactggc ttgccttaca tccaaatagc ttcgttttac
     4201 aacctgatcc caatttcaaa gaacagtacg cggatctcga aggatatgat gtcgatacct
     4261 tgaaaagcgg tttagaaaaa cgcgacagcg cttcctggaa aatgaaatcg tgggtgatag
     4321 gtgtcaatct gaataatcat gctaaggctt acgattggaa tgatcttgta aaaaagaaga
     4381 tgattgaaga cactttacag gatgtgccat tgttactcac gatgcaacca accgaacgaa
     4441 cattctacgc attcaacagg cgaacaacaa acggtacttt gcattttatt tatgatgaca
     4501 gcacacagtc tttacgagac caggaaacga agtcaacatg gaacatcgat ggcaattgca
     4561 ttgatggcag tatgaaaggg tatcgtttaa agacagtgca ggcctaccag gaattctggc
     4621 attcatggaa acaatttcat cccggaactg aaatatacaa gtgagcgttc aaataaccat
     4681 cctttgatac aaccgagtaa cgcgtaattt tttccggttg ttatactatt agcttttatg
     4741 atttgtggaa aaaatcagga atcgctggca gccagatttt tttattggat aaaaaacatt
     4801 cagtatttta gaaccagttt tccgttattc ttcttttcta aaaaccaaac taatgaaaca
     4861 caaacacctt cttgctgcgt tgttcctttt aacatgcacg tatgtaaaag cccagacgct
     4921 cgaatcatgg acgtgggaca cctacaaaat gaaattcaaa gcgcctgata acatgcgggt
     4981 ggtaaagaac aacgccgatg tttttgaagc cacgaatgac aacattacga tggacattta
     5041 tccgcgcaag ggcgagaatc tcacttatga cggcatgaag aatgccatca tcggttgggc
     5101 aaggcaatcc gatcttgttt acaacacgta caacagcagc ggaaaggctc aaccgatcta
     5161 tcttgatgat gtgaatggct actggggctg cgcaatagat ggaaaaaaat caggcttccc
     5221 tacctctatg cttttattgg tagatcctga ttatcctgat ataagctttt atgtttggct
     5281 ctcgtacgct aatgaatatt atcatgatgc cgtcgccatc ctggacagct ttgaacctag
     5341 ctgatagcgg tagttttatt ttgctttctg tgcattcaca accgaaatgc ttcgggcagt
     5401 aagtgcagca aactcttcaa atgcgttgcg cgatatcgca tcgtcgccca tcatggcggg
     5461 aatacctgca tcaccgcctt cgcgaatact ttgcacgatc ggtatttgac ccagaagcgt
     5521 gaggtcgtat tcatccgcta aacgtttacc accttctttt ccgaagatgt aatatttctt
     5581 ttcgggcagt tcagcgggag tgaagtatgc catgttctct accagtccaa tgatgggaac
     5641 atttagctgc gcctgtgcaa acatcgcgat tccttttttt gcgtcggcca aagcaacatc
     5701 ctgcggcgta gtaactatca cggcaccggt gacagggact gtttgcatca gggtgagatg
     5761 aatgtcgccg gttccgggtg gcatatcgat cacgagataa tccaggtcgc cccaatcaac
     5821 atctgtaaca aattgccgga tggcactgct tgccatcggt ccccgccaaa ccacagcact
     5881 tttctcgtcg acaagcagcc cgatgctcat cagcttaatg ccatatcgtt cgagcgggat
     5941 gatcatgcct ttgccattca catcgcgcat cattggtcgc tcaccgcgca cgccgaacat
     6001 aataggcacg cttggtccat aaatatccgc atccatcaat ccgaccttcg catcacaaag
     6061 agaaagcgcg agtgcaagat ttgctgcaac ggtgcttttg ccaacaccgc ccttcccgct
     6121 cacaactgct ataatatttt tcacacccgg taataccgca ccggtatcgc cgcgcctgct
     6181 tgttgtgtcg gaagtaaagt ttatggtcac ggttgcggac tcatcaactt gtttatggat
     6241 cgcctcgata ctttcttttc ggatcagctc ttttaaggga caggcaggag tggttaaaac
     6301 tatcgtgaag gaaactgttg aaccagttat tgaaacatct ttgaccatat tcagcgttac
     6361 aatatccttt cccaggtccg gctcctgcac gcccgataat gcacggagaa tatctgtctc
     6421 attcatgtat aaatctttat tttttatttg ccattttgca tttggccatc gaaaaccgcc
     6481 actgttaggc gaatgaaatt tcatggctca attcatcatg cataattttg ttaaaaaggc
     6541 atagggcgct gcaaagttaa ccgccggtat ggttattttg tttcgacttc aatttctttt
     6601 gcacagaaat tgatttgcat taaattaatt gcatgaaaaa aagtctgcga tatcttgttt
     6661 tgacttgcct cgtctttttt tcacttcaca cgtttgctca aaataaaaca cctgataaag
     6721 acacagtcgt tcaattgtac ggcgtcgtga tgagcgccga cagtctgcgc ggacttgaag
     6781 caaccagcgt gatcgtggaa ggaacaggaa gaggcacgct tacaaatagc gaaggcgttt
     6841 tttcgatcgc ggtgttaaaa ggtgaccgca tccgtttttc gagcattggg tttaaagaca
     6901 agaccataac aatcccgcac aacttgcagg gcaatcaata tagcgttata cagttgatgg
     6961 tgaatgacac cgcgtacctg cccgcgacga tcttgaaacc gaggccaaca cgtgcccagt
     7021 ttgaacgcga ttttgtgaat gccgaagtac cggcggacgc gctcgagatc gcacgccgca
     7081 acaacgatga agcgacgcga aaagctttat tgatgtcgtt gccggcagac ggacaggagg
     7141 cgtacaaagt gcaggtacaa caacaggctc agcgatatta ttacgccggc caacaaccgc
     7201 cgataaatct tttcaacccg gccgcatggg ctgaatttat ccaggcatgg aagcgcggcg
     7261 acttcaagcg aaatccctga catttagatt tcaatttatc gaatcgggat tatatcgcag
     7321 ccgataatct tttatcttag cccgatgaaa aaactaattg cgatctgttt cctgctgatc
     7381 agttttaaag catttccaca agacaataat ctctccgtaa ctaaacacca gctcaaggtt
     7441 ggtggggaag tcattaatta cacagccact gccggcttta tgatgatgaa agacgagaat
     7501 gattccctga aggcgaaagt tttttttgta gcatacacta aagatggcga gacagatatt
     7561 tcaaagcggc ctgtgttatt tgcttacaac ggcgggcccg ggtcttcttc ggtttggctg
     7621 cacatgggtg cgatcgggcc gaaaaaagtt gtgctgggtg acaaaggcga aatgcttcag
     7681 ccgccattta aatatggcga caacgaatac acatggcttg ataaaacaga tattgttttc
     7741 attgacccga tgatgaccgg cttcacgcga ccatctaaaa attctgacaa gagcgaattt
     7801 accggctttg aaaatgacac ccgctttgtt ggcgatttca tccggttata cacgacaaag
     7861 aattcacgct ggagttctcc aaaatttatt gggggagaaa gctatggcac tactcgctca
     7921 gccggcgtcg cgagttactt acaggaacga tacggcatgt atttgaatgg agttatcatg
     7981 atctccgcaa tacttgattt cggagctgac gaaacggacc gcggcaatga tcgtcctttt
     8041 ccattgcaat tgccaacttt cagtgcaact gcctggtatc atcataaatt aggaacccaa
     8101 tatcccgatt tgaaaacgct gttgggtgaa gttgaaaact tttcaacgaa ccaatatgca
     8161 tcggctttac tgaaaggcga tgcgattaca gacgcggaga gaaatgagat cgcagacaaa
     8221 ctccatcaat acaccgggct ttcaaaagac tatatacttc agtcaaacct tcgcttttat
     8281 gttgggagat tcaacaaaga gttgttgcgg gaccaggccc tcaccgttgg acgtcttgat
     8341 agccgtttta ccggatatga ctacgacgaa gctggtgaag gctttgaata tgatccgagc
     8401 tacgacaaaa ctatttatgg cccgtttgct gctgtagtga acgattatat caggcgcgaa
     8461 ttgaaatttg aaagtgagtt gccttatgaa atattgacgg gacgtgtggg ctcatggccg
     8521 ctggcaaatg atcgctacct gaacgttgcg gaatcgttgc gtgatgcaat gacaaaaaat
     8581 ccttttttga aagtttggat cgcgcagggt tactatgata tggcaacgcc gtactttgca
     8641 accgaaaatg tggtggctca tatgttcctc aaaaaagacc ttcggcaaaa catacatctc
     8701 acattttatg aagcagggca tatgatgtac atcaacaagc cgtcgcttgc ccagttgaaa
     8761 aatgactttt catctttcat caccagtgca ttgccaaact gagtaaagca ccaggaacaa
     8821 atgttgttgc ttacatagcc aaatcaaact gccgcactga gcaaaaactc ttatttttga
     8881 ccactgagca agaaatacat gactgcgtgt ttttattaac gcattaacct tgattgcata
     8941 catgtcatca aacgttacca aaattggcgt ccttacatcc ggcggagatt ctcccgggat
     9001 gaatgcggcg atcagggctg tggtgagaac aagcatatac cggggccttg atgtatttgg
     9061 catcatgcgt ggatataacg gcatgataga agatgacatt tcccagatga attcgcgttc
     9121 tgtcgctaac attatccaac gcggcggcac tattttaaaa acggcgcgca gtaaagactt
     9181 ctacagtgaa gaaggccgta aaagagcata tgagaatttg cagaaaagag gaatagacgg
     9241 actggtagtg atcggaggag atggaagctt cacgggcgct tataagctca gcaaagaatt
     9301 caatataccc tgcaccggga tccccggaac tattgataaa gatctctatg gaactgattt
     9361 cacgatcggt tttgacaccg ctgttaatac ggctgtatcg gcgatcgata aaatacggga
     9421 cacggccgac tcgcacgaca ggttgtttgt tgttgaagtg atgggaaggc atgcaggcta
     9481 tatcgcattg cacagcggca tcgcaacagg cgcggaaaat attctgatgc cggaagtgaa
     9541 tacaacgttg gacgaaatga tcgcatcgct cggggagcag gaaaaaagaa agaagctcgt
     9601 taacctggtt gttgtggcag aaggctatca gccggatccg tcgaaccctg atataaaggg
     9661 agcaaacgaa gttgcaaggc tcgtgaacga aaaattaaaa gggcttgaaa cgcgtgttac
     9721 gatattgggt catatacaaa gaggcggtcc gccaacgtgc atcgacaggt tcattgcaag
     9781 ccgcatgggt tatcacgcgg tgcaatgttt gatcgaagga aggcataatg taatggttgg
     9841 aatattgcat aataacatgc attacacgcc tcttgagatc gcaattcgcg agaaacaaag
     9901 aataagtgaa gactggttaa atatcgtcaa gatactggcg agttaagaac tgcacgttca
     9961 gccgtgcgtt ctgatgttga acattaaaat cttctatgtc aaacggcata tcaaagtacc
    10021 tgcacaccgg aatggacaag caggctggaa tagaacatac tttccatcgc acaaagatcg
    10081 tcgccacggt cggcccatcg tgcgacacgt atgaaaaatt actcgagttg gtgaaagcgg
    10141 gcgtgaatgt ttttcggcta aacttttcac atggcacgct cgaggacaag gagaagatgc
    10201 tggggctcat cgggcgactg aatgaagaag aaccttataa tatcaccaca atagccgatc
    10261 tgcaggggcc gaaacttagg gtcggagata tacagaacgg attactggag ataaataacg
    10321 gcgacatttt atgttttaca tcaaaagaaa aagtgctcgg aacaaaggaa aagatctacg
    10381 tttcttatcc gaacctgcac gaggatgtaa aagttggcga taagatattg atcgacgacg
    10441 ggaagcttga agtggtcgtt attgaaacga cagccgccgg tgatgtgaaa gtcgccgtta
    10501 cctatggagg aatcctgctg ccgaagaaag gattaaatct tcccgatacc gatatttcgt
    10561 tgcctgctat tacggaaaaa gacgttgttg atcttgcgtt tatcatgaag catgaagtgg
    10621 attgggtagc cctttctttc gtgcgaaaag cagaagacat tatcgacttg aagcaacgcc
    10681 tcgctgcgaa caattgtaac actaaagtga tcgcaaagat tgaaatgcct tcggccttaa
    10741 aagatctgcg caacattatc cttgaatcag atgcggtgat ggtggcccgc ggcgacctcg
    10801 gtgttgaact accggttgaa aaagtgccca tggctcagcg cgatattatc cgcaaatgca
    10861 ttcaccgcgc aaggccggtg atcgtggcta cgcagatgat ggaaagcatg atcgatcgcg
    10921 tgaagcctaa cagaagcgag ataaccgatg ttgccaatgc agtgttggaa ggcgccgatg
    10981 ctgtgatgct cagtggtgaa accgcaacag ggaaacatcc tgcgctggtc gtggaaacga
    11041 tgcggcgcat tatcctcgaa gtggaaaaaa ccgaataccg ttacaatcgc gaagaggacc
    11101 tgaagccact tccgcattcc ccttctttcc tgagcgatgc catttgctac aacgcttgta
    11161 aaattgcaaa agatgcgaac gctgatgcgc tgatagggat gacacaaagt ggttatacag
    11221 cattcatgtt gagcagctac aggccgcaat cgcctttgta catatttaca aaattaaaaa
    11281 ttctcgtaaa ccagttgagt ttaagttggg gggtgcgcgc tttttactac gatgaagagg
    11341 taagcctgga tgacatcatt ttcgatcaga taaacatttt gaaggaaaga ggttttgtaa
    11401 agccaggcga cgtagtaatt aacaccggga gtgttccggt gcatctgcac ttgccgacga
    11461 atgttctgaa aattacaaaa gttgattaga tacgcccccg aaaatcgggg gatttttttg
    11521 tgtagaaaat acatgagatg agtgatgagt gatgagtaat gagtttcaga gaccgaatgt
    11581 taccagtcat tcgaacagca attgttttta atctttcagt atgaaaaaat tgcctgcgtt
    11641 ttttttgctc cttgcctgca gcagcgctat cggacaggac attgattccg tttggatcgt
    11701 aagcaacta
//
LOCUS       DASQJI010000493         9158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_980176,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000493 DASQJI010000000
VERSION     DASQJI010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9158
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_980176"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1227
                     /locus_tag="VEV83_13510"
     CDS             <1..1227
                     /locus_tag="VEV83_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HYK46189.1"
                     /translation="IDSAIAKNVREIIPKVVEWRRHFHQNPELSTREYKTGAFVADYL
                     KSLGLEVKYPFAKTGVVAILKGGKPGRTIALRADMDALPVTERVDLPFRSVVTDTFNN
                     QTVGVMHACGHDSHTAMLMGTAEVLSKMKKDVPGTVVFLFQPAEEGAPQGVEAGAPLM
                     VKDGALDDPKVEAVFGLHIESNIEAGQIRYKPGPFMASSDWFMITVKGKGSHGASPWQ
                     GVDPIVVSAQIITALQTIVSRQEDITRSPVIITVGSINSGNRSNIIPEQAVMLGTIRT
                     LDNSIKKDVWDRMQRTVTSIAAAAGATATITIDQKTLVTDNDSALVAATVPALQLAAG
                     KENVALTNWKTGAEDFSYYSTKAPAFFFYLGGMPKGNDPDKAPAHHTADFFIDESGFD
                     VGVRAFCEIVFNYSKR"
     gene            1294..1734
                     /locus_tag="VEV83_13515"
     CDS             1294..1734
                     /locus_tag="VEV83_13515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46190.1"
                     /translation="MGLFSFTHKREPERVVETSLGPFTLAYSKDNRNIWTNRTGRLAM
                     SVRGTEFQPERAQLEFLENIDKKILDLNDEISSKFIQAFKEADMEIDFTTWQERFKLE
                     EVQVLHVHGDDTHWNITFEDMKEPYAQFTLTIEGEKVTDFYIDT"
     gene            complement(1806..8219)
                     /locus_tag="VEV83_13520"
     CDS             complement(1806..8219)
                     /locus_tag="VEV83_13520"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HYK46191.1"
                     /translation="MRKLLLLAAIIFSSLPLFAQETESPYKHQWHEIDSLIIEKSLPR
                     TALQKVDSIYNDAKTKNNREEIIKALLYRLNLEAITEFDVNKRVASLKHEIATTGDRL
                     SKSILQVMLARVFNYAYQENLWRNYNRTETVSYQDSDVTTWSGRELQRAADSLFDAAL
                     SAEETLKKTSTAEINAVLIKGDAPGTRPTVYDLLAHEALHQYKTALQYATKPSHGFQL
                     NDIRALADDIQFVQYRFASQDSMSHILKTLQLFQQLTKFHLTDTDPTALIDLDMERIE
                     WARMATFDEDEDSLYEAALKNITNRFTNEPAAAEAWYLLADLYATNAESYHPLRDTFN
                     RYGYEKAKQLIEERLRAVPDSSFGNEQMKVLLKKITAPDLTTAAESVSVAGKPFKMLV
                     TYANIDTIYARLLWQKDVNAARKKKDFNQWRDVPLLTAIKTFQQYLPQTNDHQQHAVE
                     IKIDALPPGDYAILFSNSRSFSDDDKLALQTFSVSSLAYMRNGFDYFVVDRETGQPLQ
                     NVRVTGSVETVNSNKSVIKNVEALTDSLGHVRLPFDEKQVKYYSNVELTFRKGNDILN
                     SYDNFFAYHYSNDNGDEDDSDYEDNNSQVYFFTDRSIYRPGQTVFYKGIVVTRDRDTK
                     NYKLYHYADTIEVDLRDANGNTVDSMHVTLNDYGSFSGKFVLPANALTGEFTIETLDF
                     NGETEFNVEEYKRPTFYVEFDTLKNSYRLGDTITVSGYAKAFAGNAIDNAKLTYHIER
                     KATFPYSWLFWNRQRPFGSSEEIADSTIYVGSDGSFQIKFVAEADRSIDKTTEPVFDF
                     KISVAVTDANGETREADNNVAVAYKALLLQLKVPDLAEVSKFGNIYVTTKNNAGENIP
                     ARVNIAISRLQTPSKVYSKRLWEQPDQFLMDQQTFEKYFPHDEYKNETDYQEWKKLNV
                     VLKDTFNTAVTSNFKLPTSLLAQGWYCIEASALDKDGNEVKDVRYVQLYDMNAAGLPS
                     PQTNFFHAGSNMGQPGEKAEMLLGTSEDSVFAVEKITKGYDIQGRLTVIRLNNNKEQI
                     SYIIQPDDKTNIGLYYGFIKHNRFYNGGMLVYAGSDAKKLNITYASYRNKTEPGSNET
                     WSVRVTNDSNKNADAELLTSMYDASLDEFQKHSWDLPYFFESRYPVNNWDANDFEKNG
                     STENWKQIMTVPERRYDHLARSGYELWIRYRKERIGATSYTSPKIFDDADAEKQIQLS
                     TELQGQVAGVTVAAARRSGMLNEVVVTALGVSREAKALGYVVSIVNGQDITDTSFFHA
                     KIRGIAGVSNVSEVMVIIDGVITTRKVEELNTAEIDHLTILRGSEAVALYGSKAANGA
                     IVITTKEFALRNPRKKQEGTPPQIRKNFNETAFFFPHLHADSSGNYTFSFTMPEALTQ
                     WKWMSFAHNKDFSLGSRQQTIITQKTLMIQPHLPRFLREGDTMGITAKISNLSDTILK
                     GTAFIQLVDALSNQPLTDLFILRTKELQFSAGPAQTSVVKFLLNIPPHFDKPLTIKVF
                     ATAGNFSDGEENTLPVLSKRMLVTETLPLFLQGGGTKTFRFEKLLKNHSSTLVNEGLT
                     IEYTPDPVWYVVQSLPYLIQFPHECAEQTFDRFYANALAANILRQHPQIKKVVGHWLH
                     DSIGVEKSQGPLQSNLEKNPELKEILLKETPWVIDAANESQQKKNIALLFDAGAISRG
                     TEVALNQLKQMQLQDGSFAWFKGGKPDRYITQYILTGIGKLKTLDAVPLNAWDDLNDI
                     AMSALRYLDKKAAEDYNDLVKHKSDLSKNHLDPFMIQYWYMRSFFADQNSAGIPANAL
                     KFFVQQVQNFWMDESPYMQAMIAMSLHRFHIPITQIQVNNTVSDIVRSLKENAVEDSI
                     KGIHWKNNTAGYYWYESPIQAQAMLIDAFKEIVPNDAAIDGMDEWLIINKQTNSWGST
                     TATADACYALLNNIHTLEQNISADVRVGDSLINRTNKEDGTGYMKYRFNGRDIQSSMG
                     NVAISVHDDAGKTISTPSFGAVYWQYFEEIDKITTASSTPLSLSKKLFIETNSSKGKV
                     LQPVTEDHPLKVGDKVIIRLVLKTDRDMEYVHLKDMRAASMEPVNVLSEYKWQDGLGY
                     YESTRDAATNFFIDHLAKGTYVFEYPVYVTHTGIFSVGTANIQCMYAPEFSAHSEGTR
                     ITVKQ"
     gene            complement(8362..>9158)
                     /locus_tag="VEV83_13525"
     CDS             complement(8362..>9158)
                     /locus_tag="VEV83_13525"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK46192.1"
                     /translation="YSFAQVQLPQPSPTATVAQNFGLGKITLVYSRPSIKGRTLFADN
                     SDLAPLGKIWRTGANAATRLTFSDNVNFGGKDLDTGSYVLYTIPGKTEWEIILNKGLN
                     NNGTDGYKESEDVTRFKVPVVNLPGMGVETFTMDFTNLKPESCNLMLLWGNTMVSIPI
                     TTKVVDKVRAQIENALQGNDKPYWQAANFYYTYDKNYSKALDNVNHAIEKNQDAYYMY
                     MMKARIQKELGDKTGAKASAEKCIQLATADKNDDYIKQGNEFLKAL"
BASE COUNT         2296 a         2059 c         2060 g         2743 t
ORIGIN      
        1 atcgattcgg ctattgcaaa gaatgtaaga gaaataatac caaaggttgt tgaatggcgc
       61 cggcattttc atcagaaccc ggagttgtca acccgtgaat ataaaacggg cgcgttcgtt
      121 gccgattatc ttaagtcgtt aggacttgaa gtaaagtatc cgttcgcaaa aacaggcgtt
      181 gtcgcaatat tgaaaggcgg taagcccgga cgaacgatcg cattgcgtgc agatatggat
      241 gccttgcccg ttaccgagcg agtcgatctt cctttcagat ctgtggtaac agatacgttc
      301 aacaatcaaa ccgtaggtgt tatgcatgcg tgtgggcatg attcgcacac agccatgctt
      361 atgggtaccg cagaggtctt gagtaaaatg aaaaaagatg tgccgggaac tgtggttttt
      421 ttatttcaac ccgcggagga aggagcaccg caaggcgttg aagcaggcgc tccactcatg
      481 gtaaaagacg gcgcgctcga tgatccgaaa gttgaggcag tatttggttt gcatattgag
      541 agcaatatcg aagcagggca aataagatat aagcccggac cgttcatggc ttcatcagat
      601 tggtttatga tcacggtgaa aggaaaggga agtcatggtg cgtctccatg gcagggagtt
      661 gatccaatcg ttgtatcggc gcagatcatc acagcgctgc aaacgattgt gagccgacag
      721 gaagacatta cgaggtcgcc tgtgataata actgtcggaa gtattaatag tggtaatcgt
      781 tcgaacatta ttcctgaaca ggccgttatg ttgggaacca tccgcacgct cgacaatagt
      841 ataaagaaag acgtttggga tcggatgcaa cgcaccgtta catctatagc tgcggcggca
      901 ggtgcaactg caacgataac gattgatcag aagacgctcg tgactgataa tgactcggct
      961 cttgttgcag caactgttcc tgctctgcaa ctcgctgccg gaaaagaaaa tgttgccctg
     1021 actaactgga agacaggagc ggaggacttt tcatactact caacaaaagc gcctgctttc
     1081 tttttctatc tcggtggtat gccgaaagga aacgatcctg ataaagcacc ggctcatcac
     1141 accgcagatt tctttattga tgaaagcggt tttgatgtgg gcgtgagagc attttgcgag
     1201 atcgttttta attatagtaa acggtaacaa attatagtaa acggtaggtg tctgacactt
     1261 ttaaagtgtc tgacacgtgc acaaacaaat aagatgggct tattctcctt cacacacaaa
     1321 cgggagccgg agagagtagt tgagacttcg ctaggtccgt ttactttagc gtacagcaaa
     1381 gacaacagga atatatggac caacagaact ggccggttag caatgtctgt ccgaggaacc
     1441 gaatttcaac cagagcgggc gcaactggaa tttctcgaaa acattgataa aaaaattttg
     1501 gatttgaacg acgagatatc aagcaagttc attcaagcat ttaaagaagc ggatatggag
     1561 atcgatttta ccacgtggca ggagcggttc aagttggaag aggtccaggt gttgcatgtg
     1621 cacggcgacg acacacattg gaacataacg ttcgaagaca tgaaagaacc gtacgcgcaa
     1681 ttcactttaa ccatcgaagg ggaaaaggtg actgattttt atatcgatac ctgacagtcg
     1741 cgcgtgattt gatcaaggaa tcattacgct caacactcat tcatcgctca caattcacca
     1801 atgactcact gcttcaccgt tatccttgtt ccttcgctat gggccgaaaa ttcgggtgca
     1861 tacatgcatt gaatattggc ggtgccgact gaaaagattc cggtgtgcgt gacatatacc
     1921 gggtattcaa aaacgtaagt gccttttgcg agatgatcaa taaagaaatt cgtagcagca
     1981 tctcttgtag attcataata ccctaaaccg tcctgccatt tatattcgct caaaacattt
     2041 acgggctcca tcgatgcagc acgcatatct ttaagatgaa cgtattccat atcacgatca
     2101 gttttgagaa caagtcttat gatcactttg tcacccactt tcaatgggtg atcttcagta
     2161 acaggttgca gcacttttcc tttagaggaa ttcgtttcaa tgaataactt tttgctgagc
     2221 gaaagcggtg tcgaggaggc tgtcgtgatc ttatcgatct cttcaaagta ttgccagtac
     2281 actgcgccaa aggaaggtgt cgaaatagtt tttcctgcat catcgtgtac tgagatggcc
     2341 acatttccca tagatgactg gatatccctg ccattaaaac gatatttcat ataacctgtg
     2401 ccatcttctt tatttgtgcg gttgatcaaa gaatctccga cgcgcacgtc ggcagaaata
     2461 ttttgttcaa gtgtgtggat attattcagg agcgcataac aggcatcagc ggttgcagta
     2521 gtggaacccc agctattagt ctgcttattt atgatcagcc actcatccat gccatcgatc
     2581 gcggcgtcat ttggtacgat ctctttgaac gcatcaatca acattgcctg tgcctgtatt
     2641 ggagattcat accaatagta gccggccgtg ttgtttttcc agtgtattcc ctttatggaa
     2701 tcttcaaccg cattctcttt gagcgagcga acaatatctg acactgtgtt gtttacttgt
     2761 atttgcgtga tgggaatgtg aaaacgatga aggctcatgg cgatcatagc ctgcatataa
     2821 ggcgattcat ccatccaaaa gttctgaacc tgttgcacaa agaatttcaa tgcatttgcc
     2881 gggatcccgg ctgaattttg atcagcgaaa aaacttctca tgtaccagta ttggatcatg
     2941 aatggatcaa ggtgattttt tgaaagatca cttttgtgtt tgacgaggtc gttataatct
     3001 tctgcagctt tcttatctaa ataccgcaag gcgctcattg caatatcatt taaatcgtcc
     3061 catgcattca ggggaacggc atcgagtgtt ttcagtttgc cgatccctgt caaaatatat
     3121 tgtgtgatat acctgtctgg ttttccgcct ttaaaccagg caaacgatcc atcctggagc
     3181 tgcatttgtt taagctggtt cagcgcgact tctgtccctc tgctgatcgc tcctgcatca
     3241 aaaagcaacg caatgttttt cttttgttgg ctttcattgg cggcgtcgat cacccacggt
     3301 gtttctttta gtaatatttc tttgagttcc ggattttttt cgaggttgct ttgcagcggc
     3361 ccctggcttt tttcgacccc aatggagtca tgcagccagt gcccgacaac tttctttatt
     3421 tgcggatgct gtcgcagaat attagcggct aacgcgttcg cgtaaaaacg gtcgaacgtt
     3481 tgttcagcgc attcatgcgg gaactggatg aggtatggca gagattgtac tacgtaccaa
     3541 accgggtcgg gtgtgtattc gatagtaaga ccttcattca ccaacgtgga cgaatggttt
     3601 tttaaaagct tttcaaacct gaaagttttc gttccgccgc cctgcaggaa caaaggaagt
     3661 gtttctgtaa ccagcatgcg tttgctgagg accgggagcg tgttttcttc gccgtcgctg
     3721 aagttgcctg ctgttgcgaa aacttttatt gtgagcggtt tgtcaaagtg tggcggtatg
     3781 ttgagcaaaa atttgacaac cgatgtttga gccggacctg cggaaaattg cagctccttg
     3841 gttcgtagga taaataaatc agttaatggc tgattgctga gggcatctac tagttgtatg
     3901 aacgctgtgc ctttcaaaat cgtgtcgctt agattactga tcttagcagt tatccccatc
     3961 gtatcaccct cgcgtaaaaa gcgcggcaaa tgcggttgta tcataagcgt tttctgcgtg
     4021 atgatggttt gttgtcttga acccagagaa aagtctttgt tgtgtgcgaa gctcatccat
     4081 ttccattgcg ttaacgcttc cggcatcgta aaactgaagg tgtaattgcc cgaactgtct
     4141 gcatgcaggt gcggaaaaaa gaatgcagtc tcgttgaagt tttttcttat ctgcggtggt
     4201 gtgccttcct gtttttttcg cgggttgcgc aaagcgaact ctttggtggt tataacgatc
     4261 gcgccgtttg ctgcctttga cccgtagagt gcgaccgcct cgctgcctct gagaattgta
     4321 agatgatcta tttccgcggt gttgagttct tctactttcc tggttgtaat tactccgtca
     4381 attattacca tcacctcgct cacattcgac acaccagcta tgcctctgat ctttgcgtga
     4441 aaaaagcttg tatctgttat atcctggccg ttcacaatgg agaccacata accgagagct
     4501 ttcgcctccc ggctcacacc cagcgccgtc accactacct cattcaacat tccagagcgc
     4561 ctcgctgccg ctacggtaac tccggctact tgtccttgca gttccgtgga taactgaatt
     4621 tgcttttcag catctgcgtc gtcgaaaatt tttggtgagg tatagctcgt cgcgccgatc
     4681 ctctctttcc tgtatcgtat ccaaagctca taccctgatc tcgcaagatg atcatatctt
     4741 ctttccggga cggtcatgat ctgtttccaa ttttcggttg acccattttt ttcaaaatca
     4801 tttgcatccc aattgttgac agggtatcgc gattcaaaga aataaggcag gtcccagctg
     4861 tgcttttgaa actcgtccaa cgatgcatcg tacatactgg taagcaattc tgcatctgca
     4921 ttcttgttgc tgtcgttagt tacccggaca gaccaggttt cattgcttcc cggctctgtt
     4981 ttattccgat aggatgcata agtgatattt agctttttcg catcgctgcc tgcatacaca
     5041 agcatgccgc cgttataaaa ccggttatgt tttataaagc cataatacaa accaatattg
     5101 gttttatcgt ctggttgaat gatatagctg atctgttcct tgttattatt gagcctgatc
     5161 actgtcagcc gcccttgaat gtcgtaacct ttagttatct tctccacagc gaatacactg
     5221 tcttcgctcg ttccaagcaa catttctgct ttctcaccgg gctgtcccat attactgccc
     5281 gcatggaaaa aattcgtttg cggggaaggc aaacctgccg cattcatatc atacaattgc
     5341 acgtaacgga catctttcac ttcgttacca tccttgtcga gcgcggacgc ttcaatgcaa
     5401 taccaccctt gtgcgagcag cgaagttgga agcttgaagt ttgaagtcac cgcagtgttg
     5461 aatgtgtctt tcagaacgac atttaatttt ttccattcct ggtaatctgt ttcgtttttg
     5521 tattcgtcat gaggaaaata tttttcaaac gtttgttgat ccatgagaaa ttggtcaggc
     5581 tgctcccaaa gtcttttgct gtacactttc gatggagttt gcaaacgact gatcgcaatg
     5641 ttcacgcgcg ccggaatgtt ttcacccgca ttgttcttcg tggtaacata gatgtttcca
     5701 aacttcgaaa cttcagcaag gtccggcact ttcaactgca ggagcagcgc cttatatgca
     5761 accgcgacgt tattgtcagc ttcccttgtt tccccattag catccgttac cgcaacactg
     5821 atcttaaaat caaaaacagg ttcggtcgtt ttatcaattg acctgtcggc ttcggcgaca
     5881 aactttattt gaaagctgcc gtcgcttccc acataaattg tactgtcggc tatttcttcg
     5941 ctgctgccga aagggcgttg ccggttccaa aatagccagg aataggggaa cgtggctttt
     6001 ctctcgatat gataagtaag cttcgcgttg tcaatggcat ttccggcaaa ggcctttgca
     6061 taaccggaaa cagttatcgt gtctcccagg cgataagaat tcttcaaggt atcgaactca
     6121 acatagaaag taggccgctt gtattcttcg acattgaatt ccgtttcacc gttaaagtcc
     6181 aatgtttcaa ttgtgaactc gcctgtcaaa gcattcgccg gcaaaacaaa ttttccgctg
     6241 aatgaaccgt aatcattcag ggtgacatgc attgagtcaa ctgtgttccc gttcgcatca
     6301 cgaagatcaa cttcaatggt gtcagcataa tgataaagct tgtagttttt cgtatccctg
     6361 tctcttgtca ccacgatccc tttgtagaac accgtttggc caggacgata aatactccgg
     6421 tcagtaaaaa aataaacctg cgagttgtta tcctcataat cggaatcgtc ttcatcacca
     6481 ttatcattac tgtagtggta agcaaaaaaa ttgtcgtacg agttcagaat atcgttccct
     6541 ttccgaaacg tcaattcaac attactgtag tatttaactt gtttttcatc aaatggaagc
     6601 cggacatgtc ctaaactatc ggtgagcgct tctacattct ttatgaccga tttatttgag
     6661 tttaccgttt cgacgctgcc ggttacccgc acgttttgca gcggctgacc tgtttcccta
     6721 tccacaacaa aatagtcaaa tccgtttcgc atgtaagcga ggcttgaaac actaaatgtt
     6781 tgcagggcaa gtttgtcgtc atcactaaaa cttctgctgt tactgaaaag aattgcgtaa
     6841 tcgccaggcg gtaaggcgtc aatttttatt tcaaccgcgt gttgctggtg atcgttcgtt
     6901 tgcggtaaat attgttgaaa tgttttaatg gctgttaaaa gcggaacatc ccgccactgg
     6961 ttaaagtcct ttttctttct tgcggcgtta acgtcttttt gccagagcag ccgcgcataa
     7021 atcgtatcaa tattcgcata ggtgacaagc attttgaaag gtttgcccgc aacactcact
     7081 gactcggcgg ctgtagtgag gtccggtgct gtgatctttt taagaaggac cttcatttgt
     7141 tcgtttccga aagaagaatc gggcactgcc cgcagtctct cttcgatgag ctgttttgct
     7201 ttctcatagc cataccggtt gaaggtatcc ctcagcggat gataggattc agcatttgtt
     7261 gcatacaggt ctgctaacaa ataccacgct tctgcggctg caggttcatt cgtaaatcga
     7321 ttggtgatgt tttttagagc ggcttcatac aagctgtctt catcttcatc aaatgtcgcc
     7381 atacgtgccc attcgattcg ttccatatcg agatcgatca gagcggtcgg gtcagtatca
     7441 gttaaatgaa acttggttaa ctgctgaaac aattgcagtg tttttaatat atgggacatg
     7501 ctgtcttgcg aggcaaaacg gtattgcaca aattgtatat cgtctgccaa tgcgcggata
     7561 tcatttaatt ggaaaccgtg cgaaggcttt gtggcgtatt gcaaggctgt tttgtattga
     7621 tgaagcgctt catgtgcaag cagatcatat acagttgggc gtgtacctgg cgcatctcct
     7681 ttgatgagga ctgcattaat ttccgctgtg cttgtttttt tcaacgtttc ttccgcgctg
     7741 agcgccgcat caaataagct gtcggctgct cgctgcagct ccctaccgct ccacgtcgtt
     7801 acgtcgctgt cctggtaaga aacagtttct gttcgattgt agtttctcca taagttttct
     7861 tgataagcgt agttgaaaac gcgggcaagc atcacttgca aaatactttt cgacagccgg
     7921 tcgccggtag ttgctatttc atgtttaagt gatgcaactc gtttgttgac atcaaactcc
     7981 gtgattgctt cgagattcaa cctgtacagt aacgccttaa tgatttcttc gcggttgttt
     8041 ttcgtttttg catcattata tatcgagtca actttctgca atgctgtccg cggcaggctt
     8101 ttttcaataa tgagagaatc gatctcatgc cattggtgtt tatacggact ctccgtttcc
     8161 tgggcgaaaa gaggcaggga agaaaaaata attgcagcca gcaacagtaa ctttctcatg
     8221 ggagcaaatg gttttacaat ttaatctatt tgcttgtgag atgcaagcgc tggatgaaat
     8281 acataaagcg atcatgaatt actgacaaat aaaaacggca atcttgcgga ttgccgtcgt
     8341 aattacttcg gaaagaaaag cctacaacgc cttcaaaaac tcatttccct gttttatgta
     8401 atcgtcattt ttatctgcag tcgcgagctg aatgcatttt tccgcgcttg cttttgcacc
     8461 ggtcttatcg ccaagttctt tttgaatacg cgctttcatc atgtacatat aatacgcgtc
     8521 ctggttcttt tcgatagcat ggttcacgtt gtccagcgcc tttgaataat ttttatcata
     8581 agtgtaataa aaatttgctg cctgccaata gggtttatca ttgccctgta atgcattttc
     8641 tatttgagcc ctcactttgt caaccacttt tgtagtgatg ggtatactga ccatcgtgtt
     8701 tccccaaagc agcataaggt tgcagctttc cggtttcagg tttgtgaagt ccattgtaaa
     8761 tgtttcaacg cccatccccg gcaaattcac aaccggcact ttgaagcggg ttacatcctc
     8821 gctttctttg tatccgtcag tcccgttgtt attcaaaccc ttgttcagaa tgatctccca
     8881 ttccgttttt ccgggaatgg tatacagaac gtacgagccg gtgtcaaggt ctttaccacc
     8941 aaaattcaca ttgtctgaga acgttaatcg tgtggcggca ttggcgccgg tccgccagat
     9001 tttgccaaga ggcgcgaggt cgctgttatc ggcaaataac gtccgtccct tgatcgaagg
     9061 acgtgaatat acaagcgtaa tttttccaag cccaaagttt tgagccactg tagcggtcgg
     9121 actcggctgt ggcaattgaa cctgggcgaa tgaataac
//
LOCUS       DASQJI010000494         2803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_366290,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000494 DASQJI010000000
VERSION     DASQJI010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366290"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..140)
                     /locus_tag="VEV83_13530"
     CDS             complement(<1..140)
                     /locus_tag="VEV83_13530"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF014593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HYK46193.1"
                     /translation="MSASQKEIKKVTTNTLQRMKEHGEKISMLTAYDFSFAKIFDAAN
                     IDV"
     gene            complement(346..1578)
                     /gene="serA"
                     /locus_tag="VEV83_13535"
     CDS             complement(346..1578)
                     /gene="serA"
                     /locus_tag="VEV83_13535"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HYK46194.1"
                     /translation="MDQATSYPKEKISILFLENISDKAVERFKRNGYVNVKKLTGALP
                     EDELVRQIKDVHLLGIRSKTQITSNVLQAAKKLQAIGCFCIGVNQVDLKAATRSGVAV
                     FNAPYSNTRSVAELIIGLSIMLIRRIPDKNKAAHEGIWMKEAKGSYELRGKTLGIVGY
                     GNIGSQVSVLAESFGMKVIFYDVETRLPLGNATDAKSLKEVLTSSDIVSLHVPDTPET
                     KNLINKNNIRQFKKGAILLNYARGEVVELAALAKALKDGSLSGAAIDVFPDEPEKNGD
                     SFSTPLQGLSNVILTPHIGGSTEEAQQNIGDDVSSKLFNYLERGITNGSHTVPAISLP
                     PIEGAHRILHIHNNVPGVLSAINTELSKHKINILGQYLKTNDDIGYVVLDVDKQLSKH
                     AVELLREVKETIKVRMLY"
     gene            complement(1679..1930)
                     /locus_tag="VEV83_13540"
     CDS             complement(1679..1930)
                     /locus_tag="VEV83_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HYK46195.1"
                     /translation="MKKDIHPKSYKLVVFRDMSNGYSFLSRSTASSKEMVKWEDGNEY
                     PLIKLEISNTSHPFYTGKNVLVDTAGRIDKFRKRYEKKK"
     gene            complement(2020..>2803)
                     /locus_tag="VEV83_13545"
     CDS             complement(2020..>2803)
                     /locus_tag="VEV83_13545"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK46196.1"
                     /translation="LGNLILTAAMINDFIGWILFSIIIQLMKTGSQEGSFSSVTLVLL
                     FTIVLLTIGRWVVDKILLVANHFFTPGVMITLAVCLCLLSAVFTEFLGVRGIFGAFLM
                     GVVVGDSKYFPERLQHVLHQFVVNIIAPLFFASIGLRINFVSNFDPEIITIILLIACL
                     AKIIGSGVGARMSGLTKNESYVIAFGMNSRGSQEIVLGTLALQAKIIDEPIFVGLIVM
                     TVITILMAGPVMKYYLAKEHALSESAAADTDVSLAQAGAPVR"
BASE COUNT          778 a          654 c          563 g          808 t
ORIGIN      
        1 acatcaatgt tggcagcatc aaaaattttt gcaaaggaaa aatcgtaggc agtcagcatg
       61 gatatttttt caccatgctc cttcatgcgt tgcagcgtgt tggtagtaac tttttttatt
      121 tctttttggg atgccgacat ctgaataaaa ttttggagtt aactgaatat ggtcctgctt
      181 tagaataaaa catatccaga tgtcaatatg caaatatgat gaatgtagtt ggaattaaca
      241 gagtttggat tttgaaattt tggaattcac aaattgaaag cgacgtcatc ttttgataag
      301 ttgttcgtca attcatcttg aaatttttta aagtgatctt accatctaat acaacatcct
      361 caccttaatt gtctccttca cttctctcaa taactcaacc gcgtgttttg acaactgctt
      421 gtcaacgtcg agcaccacgt aaccgatgtc atcgttcgtc tttaagtatt ggccgagaat
      481 attgatctta tgttttgata attcagtgtt gatagcactc aacacaccgg gcacgttatt
      541 gtgaatgtga aggatacgat gtgcgccttc tattggcggc agactgatcg ccggaacggt
      601 atgcgatcca ttcgtgatgc cgcgttcaag gtaattaaac agtttactgc ttacatcatc
      661 accgatgttc tgttgcgcct cttccgttga acctccgatg tgcggcgtca gaataacatt
      721 tgacaaacct tgtaatggcg tagaaaacga atcaccattc ttttccggtt catcaggaaa
      781 cacatcgatc gctgcaccac tcagtgatcc atctttcaac gcttttgcca acgcagctaa
      841 ctcaactact tctccccttg catagtttaa caggatcgca ccttttttga attgcctgat
      901 attattcttg ttgatgagat tttttgtttc cggcgtatcc ggcacgtgca atgaaacaat
      961 atcagatgaa gtaagtactt ccttcaaact ctttgcatcg gttgcattac caagtggcaa
     1021 cctggtttcg acatcataga aaataacttt cattccaaac gattcagcca gtacacttac
     1081 ctgcgaacca atattcccgt aacccacgat gcccaatgtt ttgcccctca actcataact
     1141 tcctttcgct tctttcatcc agatgccttc atgcgctgct ttgttcttat ccggtatacg
     1201 gcgaatgagc atgatagata aaccgatgat caattctgcg acactgcgcg tgttactgta
     1261 tggagcatta aacacagcaa cacccgaacg agtagccgct ttaagatcga cctggttgac
     1321 accgatacaa aaacatccga tcgcctgcag tttctttgca gcctgcaaaa cgtttgaagt
     1381 gatctgcgtt tttgaacgga tacctaaaag atgaacgtct tttatttgac ggaccaactc
     1441 atcctcgggc agcgcaccgg ttagcttttt cacattgacg taaccgttcc gtttaaatcg
     1501 ctctacggcc ttgtcgctga tgttttcaag aaaaagaata ctgatctttt ctttcggata
     1561 agaagtagcc tggtccataa tcgtgcgatg caaaggaaat atttcctgtc ttattgattg
     1621 aagtaattat taacaaaaat ccccccgtga agccggaggg attttctgtt gagtttcttt
     1681 attttttctt ttcgtaacgt ttgcggaatt tgtcaatgcg cccggcagtg tcaaccaata
     1741 catttttacc cgtataaaaa ggatgcgacg tattcgagat ctccagcttg ataagcgggt
     1801 actcgttgcc atcttcccat ttcaccattt cttttgaaga agctgtcgac cggctcaaaa
     1861 aagagtaacc gttactcatg tcccggaaca caaccagttt gtagctctta ggatgaatat
     1921 cttttttcat gacttaaatt ttgtaaatac ggtctttgtc gtattgtttt aaagaggcgc
     1981 aaagataagg ggcagcaggt tttcagccaa atgatttagc tatctaaccg gggcgcccgc
     2041 ttgtgccaat gaaacatctg tatcagccgc cgcactttcg gacaatgcat gctcttttgc
     2101 gaggtaatat ttcattaccg gcccggccat caagatggtt atgaccgtca tcacgatcag
     2161 ccccacaaag atcggctcgt caatgatctt cgcctgtaaa gccaacgtac cgagcacgat
     2221 ttcctgcgag ccccgggagt tcatgccgaa tgcaattacg tatgactcat ttttagtcag
     2281 cccactcatc ctcgctccaa caccagaacc aattattttg gcgaggcagg cgatcagcaa
     2341 aatgatcgta atgatctcag gatcaaagtt tgaaacaaag tttattcgca aaccgattga
     2401 agcaaagaac agcggtgcta tgatgttaac cacaaactgg tgcagtacgt gctgcaacct
     2461 ttcagggaag tatttcgaat cgccgaccac cacacccatc aggaaagctc cgaatatacc
     2521 gcgcacgccg aggaactccg taaacacggc gctcaaaaga caaaggcaaa cggcaagggt
     2581 gatcatcacg ccaggcgtaa aaaaatgatt ggcgacaagg agaatcttat ccacgaccca
     2641 tcgcccgata gtaagcaaga cgatcgtaaa caacaacacc agtgttaccg acgagaacga
     2701 tccttcctgg ctgccggtct tcatgagttg gatgatgatg gaaaataata tccagccaat
     2761 gaagtcattt atcatcgcag cagtaaggat aaggtttcca agt
//
LOCUS       DASQJI010000495         3745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2977673,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000495 DASQJI010000000
VERSION     DASQJI010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2977673"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VEV83_13550"
     CDS             complement(<1..212)
                     /locus_tag="VEV83_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HYK46197.1"
                     /translation="MNFRRDFEIAFVGLKPGVHHFDYTIDNKFFAHYGEQDFTNCKAT
                     VKLELDKQNGFMLLKFDIDGWVDVAC"
     gene            368..3712
                     /locus_tag="VEV83_13555"
     CDS             368..3712
                     /locus_tag="VEV83_13555"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK46198.1"
                     /translation="MKDRFLLFCFALLLAPCSLFSQQTIFNRVVSPVGTFNGFVGGIA
                     QDKNGYMWFATQGGLYKYDGYRFTLYSNDPSDSNSIGASHLETVYADREGIIWIALWV
                     GGLDRLDPATGKVTHFRYDPRNTDGISDTKVRAILEDHEGTLWVGTHNGLDMFDRKTG
                     KFKHFRHDKNDPHSLSSDIVRELYEDREGVLWVGTGSVFPDEGAADDGGLNRFDRQTG
                     KFTRYVHDPNDPHSLINNKVQSLLEDSRGNFWVGTAGDGLHIMDRKTGKFERYRYDPA
                     HPERLSRPALNTTGVDQIHFITEDAAHNIWIATLGNGINKYDPKTKRITHFGYKDSAS
                     GFRHNSGWSFCNSRDGVLWIGTYEGGLYRLDPYQKDIPHVTTTGAVFGFCTDSLNNFW
                     IATTQGLIVQNRKTGISRIFVGTPRDPQSLIDNWILSIYSANDGSLWIGNNGGLNRYN
                     PASGRFTAYSNLPRNTLDGNVASVYAIKAAGGDTLCLGTSAGIVLMDERTGGFISFAN
                     KPKDSTSISPYDVVCLLPEKSGNIWAGDLTAGGLNYFDRKTRSFTHFLKGLSVSSVIK
                     DHEGTIWVGTDVGVYYRKDPQSGFQKFKFFGSAVDVTNVLSIVEDDNKNIWVSTSLGI
                     FRINGVTQEVMLYGANRNISADDLTPISGYKGPDGSIYFGASNGYYTFSPSELGGNPT
                     APQVVFTSFIVQGKPIIAGKDNILPFPLQATKKISLAYDQNVFSFDFAGIHYASPENN
                     RHLYMLENYDQTWRGAGAEKSASYFNVPPGHYIFHVKAASSDGVWAEKSIAIVISPPW
                     WRTWWAYCMYALLLLGVIVTVDRFQKARVIRAERERTRERELAQAKEIEKAYHKLTTT
                     QAQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNRELLNEMLDEVDKGNTQEAS
                     SLAKNIIDNEEKIIYHGKRADAIVKSMLQHSRISTGQKEPTDINALTDEYLRLSYHGM
                     RAKDKSFNVELRTDFDDRVGKVSVVAQDIGRVLINLFNNAFYAVMEKQKSLSASASYA
                     PLVEVVTKKLNAAVEIRIKDNGPGISQKVIDKIYQPFFTTKPAGQGTGLGLSLSYDVI
                     SKEHGGQIKVNTKEGEFTEFIIELPA"
BASE COUNT         1103 a          805 c          886 g          951 t
ORIGIN      
        1 tcgcaagcta catccaccca accatcaatg tcaaacttca ggagcatgaa cccgttttgt
       61 ttgtcgagct ccagctttac agtggccttg cagtttgtaa aatcctgctc accataatgc
      121 gcaaagaact tattgtcgat agtgtaatcg aaatgatgaa ctcccggttt cagcccaaca
      181 aacgcaatct caaagtctct cctgaaattc atctccgaaa atttggctgg caaaggtaac
      241 tgaaaaatgc tttatggcaa agctattggt ccatgacttt gcatcatggg tcctagtaaa
      301 accatcctca ctgaattatc accattaaag tatattttta tagaactgat ctaacggcag
      361 ctgttttatg aaagatcgtt tcctgctttt ttgctttgca ttactgttgg ccccgtgttc
      421 gttattctcg cagcaaacca tatttaaccg ggttgtatca ccggttggaa cctttaatgg
      481 cttcgtcggt ggcattgcgc aagacaagaa cggatatatg tggttcgcca ctcaaggcgg
      541 cctatacaag tacgacggtt ataggttcac cttatatagc aacgatccat cagactcaaa
      601 ttctattggc gccagccacc tggaaaccgt ctatgctgac agggaaggga tcatctggat
      661 cgcgctttgg gttggcggcc ttgaccggct tgatcctgca accgggaagg ttacccattt
      721 taggtatgac cctagaaata cggatggtat tagcgataca aaagtaaggg cgatactgga
      781 agaccacgaa ggcacgcttt gggtcggcac gcataatggc cttgatatgt tcgatcgtaa
      841 aacaggaaaa tttaaacact ttcgacacga taaaaatgat cctcatagtc tcagttccga
      901 cattgtacgt gagttgtatg aagacaggga aggcgtgctg tgggttggta ctggcagcgt
      961 tttccctgat gagggagctg cggacgacgg tggactcaac cggtttgaca ggcagaccgg
     1021 aaagtttacg cgatatgtgc acgatccaaa cgatccacac agtcttatca acaacaaggt
     1081 acagtcgttg ctcgaagata gcagaggcaa tttttgggtg ggaacggcgg gggatggttt
     1141 gcacattatg gatagaaaaa ccggaaagtt tgaaagatat cgatatgatc ctgcacatcc
     1201 tgaaaggtta agcagaccag cactaaacac gaccggcgtg gatcaaatac actttatcac
     1261 cgaagatgcg gcacataata tatggatagc tacattggga aacggcatca acaagtatga
     1321 tccgaaaaca aaacgaataa cgcattttgg atataaagac agtgcctcag gttttcggca
     1381 taatagcggc tggagttttt gcaactcccg ggatggtgta ctttggattg gtacgtatga
     1441 aggaggtctg taccgccttg acccctatca aaaagatata ccgcatgtta ctacgaccgg
     1501 cgctgtattt ggattttgta ccgacagctt gaacaatttc tggatagcga cgacacaggg
     1561 tctaattgtt caaaacagaa agacaggaat ttcgagaatt tttgttggga cgccacgtga
     1621 tccgcaaagt ctcatcgata attggatcct ctcaatttat tcagcaaatg atggtagcct
     1681 gtggatcggt aataacggcg gtcttaaccg atataatccg gcttctggca ggtttacagc
     1741 atactcaaac ttgccgcgca atactttgga cggtaacgtt gccagtgttt acgcgatcaa
     1801 agccgcaggc ggcgatactt tgtgcctggg aacatcggct gggatagtct taatggatga
     1861 acgcacaggt ggttttattt ctttcgcaaa caaaccaaaa gatagcacca gcataagccc
     1921 ctatgatgtt gtttgcttgt tgcccgaaaa atccgggaac atctgggccg gcgatctaac
     1981 agccggcggc cttaattatt ttgaccgcaa aaccaggagc ttcacgcatt tcttaaaagg
     2041 cctttctgtt tcttcagtga ttaaggatca cgaaggcacg atatgggttg gaacagatgt
     2101 tggagtttat tacagaaaag atccgcagag cggttttcaa aaattcaaat tttttggaag
     2161 cgcagttgat gttacaaacg ttttatcgat cgtagaagac gacaataaaa atatttgggt
     2221 gagtaccagc ttgggcattt ttcgaattaa cggtgttacc caggaagtaa tgttatatgg
     2281 cgcaaatcgc aatattagcg ctgatgacct cacacccatt tcaggatata agggacccga
     2341 tggatctatc tacttcggtg cgtcaaatgg ttattacact ttttcaccaa gcgaattggg
     2401 cggaaatcct acagcacccc aagtcgtttt cacttccttc atcgtacaag ggaagccaat
     2461 catcgcaggc aaagacaaca tccttccttt cccgctgcag gcaacaaaaa aaatatcgct
     2521 tgcgtatgat caaaacgttt tttcgtttga cttcgcaggc attcattatg ccagtcctga
     2581 gaacaatcgt catctgtaca tgctggaaaa ttatgatcag acatggcgcg gagccggagc
     2641 ggaaaagtcc gcttcctatt tcaatgtgcc gcccggtcat tacatctttc acgtgaaagc
     2701 tgcaagcagc gacggtgttt gggcggagaa atcaatagcg atagttattt ctcctccgtg
     2761 gtggcgtaca tggtgggcgt attgcatgta tgcacttttg ttattgggcg taatagttac
     2821 cgtagatcgc tttcaaaaag cgagagtgat tcgcgccgaa cgtgaacgaa cgagagaacg
     2881 tgagcttgcc caggcaaagg aaattgaaaa agcatatcac aaactaacaa caacgcaagc
     2941 gcagctcatt cagtcagaaa aaatggcttc gctgggcgag ctcactgccg gcattgcgca
     3001 cgagatccaa aacccgttga attttgtcaa taatttttcg gaggtaaacc gcgaattatt
     3061 gaatgaaatg cttgatgaag ttgacaaagg aaatacgcag gaagcaagtt ccctcgcaaa
     3121 gaacataatc gacaatgaag aaaaaataat ctaccatgga aagcgggccg atgccatcgt
     3181 aaaaagcatg ctccagcatt cacgaataag cacagggcag aaggagccga cagatattaa
     3241 tgcattaacc gatgaatatt tacgattgag ttaccacggc atgcgcgcta aagacaaatc
     3301 gttcaatgtt gaattgagaa ctgatttcga tgatcgcgtt ggaaaagtaa gtgtcgttgc
     3361 acaggacatt ggacgagtcc tgatcaactt attcaacaat gctttttacg ccgttatgga
     3421 aaagcaaaag agcctatcag cttccgcatc gtatgcgccc ctggttgaag ttgtcacaaa
     3481 aaaactaaac gccgctgtgg aaataagaat aaaagacaac gggcctggca tctcgcaaaa
     3541 ggtgatcgat aagatctatc agccattctt tacaacgaag cctgcgggac agggaaccgg
     3601 cctgggattg tcactcagct acgacgttat cagtaaggaa catggtggcc agatcaaagt
     3661 gaacacgaag gagggagagt tcaccgaatt tataattgag ttaccggcgt aacgatcaga
     3721 tgcatgcaat tttaaatatt gcaca
//
LOCUS       DASQJI010000496         7366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_59341,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000496 DASQJI010000000
VERSION     DASQJI010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7366
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59341"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VEV83_13560"
     CDS             complement(<1..938)
                     /locus_tag="VEV83_13560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HYK46199.1"
                     /translation="MHSFKELTEQFSQRFTISHFPIQPKTLYEANDYFLGLGGKRIRP
                     VMCLMGNELFDEINPDAWHVATAIELFHNFTLIHDDIMDAAPLRRGLQTVHQKFGTST
                     ALLAGDVMLVVAYEYLNKIHTGCIRPIINLFSKTAKQVCEGQQLDMDFEKADSVSLDD
                     YLKMIELKTSVLLAASLQMGAILGGAGEGNSNHLYQFGKNLGIAFQVQDDYLDAFGDP
                     EKFGKAAGGDIRQNKKTFLLIHAFETADAQQKAELNILISENANDKVDRVLKIFRDCN
                     VDDWAKELKQDYLNKALYHLDEIAVLSARKKPLLELA"
     gene            complement(1162..3207)
                     /gene="rnr"
                     /locus_tag="VEV83_13565"
     CDS             complement(1162..3207)
                     /gene="rnr"
                     /locus_tag="VEV83_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HYK46200.1"
                     /translation="MKKKKSKGRHHASEPYTLKGNLEITRNGLGYVVITDGSGDVLVR
                     PGNFNTALDGDTVRVKVFKENLGTGRKEGKITEVVSRRQTEFIGVLQLSTNYAFFIPD
                     TDKPMPDLFIPFENIHGAKNKERVAVRLVQWEQDDKKPIGEVISILSDESDSDMAMKT
                     ILAEKGFPLSFPEDVIEEAERLPDTISAKELKKRKDFRGVLTFTIDPVDAKDFDDALS
                     FKKIKNGLYEVGVHIADVSHFVEPDTALDKEAYKRATSVYLPDRVNPMLPETISNELC
                     SLRPREEKYTFSTVFEMTAKGDVTKSWLGRTVIHSDHRFNYEEVQEIIEKGEGVYAEE
                     IKCLHGMAQKMRKWRFNNGAINFSSQEVRFQLDENGKPIGIIIKESKEAHQLIEEFML
                     LANRTVAAFVSNVHLHKKHQHEPNAGIPFPYRIHDEPDKDKLLPFVEFSRKFGHRFDM
                     SSPEKIARSFNQLLKDVQGKPEQHVLEQLGIRTMAKAKYTTENIGHYGLGFEHYCHFT
                     SPIRRYPDILAHRILESCLRSKPEIDKKMEEKCKHCSEMERAAMDAERAANKYKQVEF
                     MQDYLGEEFEAIISGVAGFGFWAETVEHKCEGLVSISDLNQYDDFRLVEGDYSLVGRR
                     SGRKFRMGDNVRIRVVAASLDKRQLDYQWVKAADSQQVKESKTRKKKNTEAGQRNVS"
     gene            complement(3188..4285)
                     /gene="lpxK"
                     /locus_tag="VEV83_13570"
     CDS             complement(3188..4285)
                     /gene="lpxK"
                     /locus_tag="VEV83_13570"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HYK46201.1"
                     /translation="MNFNSAFLRSFRILLFPFSLLYGLAIIIRNFLYDIKILRSAEFN
                     LPIICVGNLALGGTGKSPMVEYLVDLLHKKFRVATISRGYKRKTKGYALANDNSTALE
                     IGDEPMQFHVKFPGVPVAVGEERVVAIPQLLHDRPDTEAIILDDAFQHRAIKAGLNIL
                     LTEYSDLFVDDFFFPTGDLRDQKASSKRAHIIVVTKCDPAITAEERQKITSQLNLKDN
                     QAIFFTKIAYGTPYHIMDRNARNILTGDEILLVYGIANPRPLKQYISERTAAYEEISF
                     GDHHIFSIDDLREMNKRFQSLKTSNKFIVTTEKDAVRLLKFREQLNNMPLYVLPVRHD
                     FLFNEGEHFNQAVIAFIENFKKRMQNEKEEI"
     gene            complement(4275..4844)
                     /locus_tag="VEV83_13575"
     CDS             complement(4275..4844)
                     /locus_tag="VEV83_13575"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HYK46202.1"
                     /translation="MTKAELRNIYRQKRLSIHAKEKLKLDDLMLIEFQKLSFENTELV
                     LSYWPLSKFAEPNTHLFTGYLRHMIPSLTICYPVINPARHTMCAVAINEDTVYNTNTF
                     GIYEPPRGDVVDSAALDLVFVPMLTCDIKGNRVGFGKGYYDIYLASCRDDVCKIAFSY
                     FEPVDAVDDANAFDVPLSYCITPHNIYEF"
     gene            complement(4841..5482)
                     /gene="bioD"
                     /locus_tag="VEV83_13580"
     CDS             complement(4841..5482)
                     /gene="bioD"
                     /locus_tag="VEV83_13580"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HYK46203.1"
                     /translation="MSNVIFITGIGTDVGKTVAAAILAEALEADYWKPVQAGFSEGTD
                     AELVRSLLTPQTSVVHPETYKLKLAASPHIGAREEGIKTDLDKIAADFRAITSNVKNL
                     IIEGAGGLMVPLNEEEFVIDLVKKLNARVILVSRNYLGSINHSLMTAAVCKQNDLHVL
                     GWIFNDHYLNYEEEIVQWSGFPKIASIPASKKIDAAFIKAQAPIMKNALINFL"
     gene            complement(5504..6049)
                     /locus_tag="VEV83_13585"
     CDS             complement(5504..6049)
                     /locus_tag="VEV83_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HYK46204.1"
                     /translation="MRIISGSLGGRRINPPSKMPYTRPTTDIAKEGLFNIIQTRIQLE
                     GAKTLDLFGGTGSITYELASRGAVDLTVVEKDPAMFTFIKKNIEQFKIENCKVIRMDV
                     FKFLAADNGEYDFIFAGPPYALNTIDELPKMIVSKKMIAPGGLFVLEHTPRNNYESYA
                     GFGFKRNYGTTVFSFFEATAG"
     gene            complement(6046..6867)
                     /locus_tag="VEV83_13590"
     CDS             complement(6046..6867)
                     /locus_tag="VEV83_13590"
                     /inference="COORDINATES: protein motif:HMM:NF024271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3822 family protein"
                     /protein_id="HYK46205.1"
                     /translation="MVQKTYSIYSDNIDNGQFFIEAGKNHLAFWCRERDENKITAFEF
                     FQCDNYTGSSFDKILDAARLHSRLLATTVEAPNFIMNTDEALGVPANLSGNDEHFISQ
                     NFELLFGPCATANFLSENVEQYLFASRIDIALQERVRSCFPNVKFHTQYACLLRSLIS
                     NTGDDKVYLFFYPNYFSLIAMKDGRLEFLKTKSYIAADDVLYFVLNVFRQYKISNSTE
                     ILTGGFIDEQSKLYQTLYQYLEGLRPAAVDEAVFATGEFKDYSLHYFLPYANYVL"
     gene            complement(6947..>7366)
                     /locus_tag="VEV83_13595"
     CDS             complement(6947..>7366)
                     /locus_tag="VEV83_13595"
                     /inference="COORDINATES: protein motif:HMM:NF038013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HYK46206.1"
                     /translation="IAQIFAGLQEWKKNNTFGATAFTAYGSFWLSLVALWLIPSTSFG
                     AAYKSSETAIGWYLLLWGVFTLFMFVGTLKLSRLLQVVFITLTILFFLLSASVFTGNA
                     TLHQVAGYEGIICGGSAFYGCVAQVLNEVYGRKVLPV"
BASE COUNT         1993 a         1757 c         1491 g         2125 t
ORIGIN      
        1 gccagttcca gcaatggttt cttcctcgcc gacaaaacag caatttcatc gaggtggtac
       61 aacgccttgt tcaaatagtc ctgctttagt tctttggccc aatcatctac attgcaatcg
      121 cggaaaattt tcagcacgcg gtcaactttg tcgtttgcat tttcactgat taaaatattc
      181 agctcggctt tttgttgcgc atccgcagtc tcaaatgcat ggatcagcaa aaaggttttt
      241 ttattttgcc tgatatcgcc gcccgcggct tttccaaatt tttccggatc gccgaatgca
      301 tccagataat cgtcctgcac ctggaacgcg atgccaagat tttttccgaa ctggtataaa
      361 tgattgctgt taccctcgcc ggcaccacca aggatcgctc ccatttgcag gcttgccgct
      421 agcaaaacag atgtttttag ttcgatcatt ttgagatagt cgtccagaga aaccgaatca
      481 gctttttcaa aatccatatc aagttgctgt ccttcgcaaa cttgtttagc ggtcttgctg
      541 aaaaggttga tgataggtcg tatacagccg gtgtgaattt tattcagata ttcatacgcc
      601 accaccagca tcacatcacc ggcaagcaag gctgtgcttg ttccaaattt ttgatgaaca
      661 gtctgcaggc cgcgtcgcaa tggcgcggcg tccatgatgt catcatgtat caaagtaaaa
      721 ttgtgaaata gttcaatggc ggttgcaaca tgccaggcat ccgggttgat ctcatcaaac
      781 aactcattcc ccatcaaaca catcacaggg cgaatccgtt tgccgcccag cccgaggaaa
      841 taatcatttg cctcatacaa agttttcggc tggatcggaa aatgggagat cgtgaaacgt
      901 tgggaaaact gttcggttag ttctttgaat gaatgcatgc agcgaaatac caaataaaaa
      961 tgcaaattta aaaattgaat gtgcgatatg gctcatagcg tacaagtatg agattcccac
     1021 tttcgtggga atgacgtgcg agagacttat taattcgaaa gacgcgcagg aacatacaca
     1081 gtgattatgc accgcatgca cgcgatcagc gttttccttc tcataaaccc gtcattaaat
     1141 ctttgccgat aggcgcttcc atcacgagac atttctctga cccgcttccg tgtttttctt
     1201 ctttctcgtt ttgctttcct tgacttgctg gctgtcggca gctttcaccc attgataatc
     1261 cagttgacgt ttatctaaac ttgcagctac gacccggatc cttacgttat cacccatcct
     1321 gaatttcctg ccgcttcggc ggcccaccaa actgtaatca ccttccacca ggcgaaaatc
     1381 gtcgtattga ttcagatcgc taatgctcac aaggccctcg catttatgtt cgaccgtttc
     1441 cgcccaaaat ccgaaaccgg caacaccact tatgatcgct tcgaattctt cgcccaaata
     1501 atcctgcatg aactcgacct gtttgtattt atttgcagcc cgttctgcat ccatagcagc
     1561 acgttccatt tcgctgcagt gcttgcattt ttcttccatt ttcttatcga tctcgggttt
     1621 gcttcgtaag caactttcca aaatcctgtg cgccaaaata tccgggtacc ggcgaatggg
     1681 cgatgtaaaa tgacaatagt gttcaaatcc caaaccataa tggccgatat tttccgttgt
     1741 gtattttgcc ttcgccatcg ttcttatccc aagctgttcc agcacatgct gttcaggttt
     1801 tccctggacg tctttcaaca attgattaaa gctccgtgcg atcttttccg gcgagctcat
     1861 atcgaagcgg tggccaaact tcctggaaaa ttcaacgaaa ggaagaagtt tgtctttgtc
     1921 aggctcatca tgaatgcggt agggaaacgg aattccggcg tttggttcat gctgatgctt
     1981 tttgtgaaga tgaacattgc tgacaaatgc tgcaaccgtc ctgtttgcaa gcagcataaa
     2041 ttcttctatg agttgatgcg cctccttact ttcctttatg ataatgccaa tcggtttgcc
     2101 attttcatcg agttgaaaac gtacttcctg tgaagaaaaa tttatagcgc cattattgaa
     2161 tcgccatttt cgcattttct gagccatgcc atgcaaacac tttatctctt cagcataaac
     2221 accttcacct ttttctatga tctcctgtac ttcttcataa ttgaaccggt gatccgaatg
     2281 aatgacggtt ctcccaagcc atgattttgt tacgtcgcct ttagcggtca tctcaaacac
     2341 agtcgaaaaa gtatattttt cctcccgcgg ccgaagagaa cacaattcgt ttgatatcgt
     2401 ttccggcaac atagggttca ctctgtcggg caaataaaca gaagtagctc gcttgtatgc
     2461 ttctttatcc agcgcagtat ccggttcaac gaaatggctt acatccgcaa tgtgaacgcc
     2521 gacttcgtac aaaccgtttt tgattttttt gaacgaaagt gcatcgtcaa aatctttcgc
     2581 gtccacaggg tcgatcgtaa acgtcagtac gccccgaaaa tcttttctct tttttaattc
     2641 cttggcgctg atcgtgtcgg gcaacctttc ggcttcttcg atcacatctt cgggaaatga
     2701 taaaggaaat cctttctctg caagaattgt cttcatcgcc atgtcgctgt cgctctcatc
     2761 agacaaaata ctgatcactt cgccgatcgg cttcttatcg tcctgttccc attgcaccag
     2821 gcgcacggca acgcgttcct tgtttttcgc gccgtgaata ttttcaaaag gaataaacag
     2881 atcgggcatg ggtttatcgg tgtcaggaat gaaaaatgca taattcgttg aaagctgtaa
     2941 cacgccgatg aattccgttt gcctcctcga cacaacttct gtgatctttc cctccttccg
     3001 cccagtacca aggttttctt taaacacttt cacgcgcaca gtgtcaccat cgagggcggt
     3061 gttgaaattc ccggggcgga caagtacgtc accactgcca tcggtgatca caacatagcc
     3121 taacccattg cgcgttatct cgaggttgcc cttcaatgta tacggctccg acgcgtgatg
     3181 cctgccctta gatttcttct ttttcattct gcattcgttt tttaaaattt tcaataaacg
     3241 cgatcaccgc ctggttaaaa tgctcgcctt cattaaacaa aaaatcatgc cgcacaggca
     3301 atacatataa aggcatattg tttagttgtt cgcgaaattt aagcaagcga accgcatcct
     3361 tttcggtagt gacaataaac ttattgcttg ttttcaacga ttgaaatctc ttgttcattt
     3421 ccctgagatc atctatcgaa aaaatatgat ggtcaccgaa gctgatctct tcatatgcgg
     3481 ccgttctctc cgatatgtat tgctttagcg gccgcggatt tgcaatgcca tataccagta
     3541 agatctcatc acccgttaaa atgtttctcg cgttgcggtc cataatgtga tagggtgtcc
     3601 catatgcgat cttcgtaaaa aagattgcct ggttatcttt tagatttaat tggctagtaa
     3661 tcttttgtct ttcctccgca gttatcgcag ggtcacattt tgtgacaacg ataatatggg
     3721 cgcgttttga agacgctttt tgatcccgca ggtcgccggt gggaaaaaag aaatcgtcga
     3781 cgaagagatc gctgtattca gtcaataaaa tattaagccc ggcctttatt gccctgtgct
     3841 gaaaagcatc gtcgagaatg atggcttcag tgtccggccg gtcatgcaat aattgcggga
     3901 tagcaaccac ccgttcttcg ccaactgcga caggtacgcc gggaaatttt acatgaaact
     3961 gcatcggctc atctccgatc tcgagtgcgg ttgagttgtc gttcgctaaa gcatacccct
     4021 ttgttttacg tttgtaaccg cggctgatgg ttgcaactct aaattttttg tgcaacaagt
     4081 caacgaggta ttcaaccatc ggcgatttgc cggtaccgcc gagcgcaagg ttgcccacac
     4141 aaatgatggg caaattaaat tccgccgagc gcaggatttt tatatcataa agaaaattac
     4201 gaatgataat agccaggcca tataataatg aaaacgggaa aagaagtatt cgaaaagaac
     4261 gaagaaacgc agaattaaaa ttcataaata ttgtggggcg taatgcaata gctcaaaggt
     4321 acgtcaaacg catttgcatc atccaccgca tcaactggtt caaaatagga gaaggcgatc
     4381 ttgcaaacat catcgcggca tgaagcaaga tatatatcat aataaccttt gccaaaacca
     4441 acacgattgc cttttatatc gcaggtcaac atcggtacaa atacgagatc aagcgctgcc
     4501 gaatctacaa catccccacg aggcggttca tagatcccaa atgtatttgt gttataaacg
     4561 gtgtcttcgt ttatggccac agcgcacatc gtatgccttg caggattgat aacaggatag
     4621 caaatcgtca gcgacgggat catatgccgg agataacccg taaataaatg cgtattcggc
     4681 tcagcgaatt ttgacagcgg ccaatagctc agcacaagtt cagtattttc gaaggaaagc
     4741 ttttgaaact cgatcagcat gaggtcatcg agctttaatt tttccttagc gtgaatagac
     4801 aagcgctttt gccggtaaat gtttctcagt tctgcttttg tcatagaaaa ttgatcagcg
     4861 catttttcat gatcggtgcc tgtgctttta taaacgctgc gtcaattttt tttgaggccg
     4921 gaattgaggc gatctttgga aaaccgctcc attgcacgat ctcttcttcg tagttcaaat
     4981 aatggtcatt aaatatccat cccaaaacat gcagatcgtt ttgtttgcaa acagccgcgg
     5041 tcatcagtga atgattaata ctgcccaaat aattcctgct caccaatatt acgcgggcgt
     5101 ttagtttttt cacgaggtca attacaaatt cctcttcatt caaagggacc atcaaaccac
     5161 cggcaccttc tattattaag tttttcacgt ttgaggttat ggcgcgaaaa tctgccgcga
     5221 tcttatccag gtctgtttta attccttctt ccctcgcacc gatgtgcggt gaggctgcaa
     5281 gttttaattt ataggtctcc ggatgaacaa ccgatgtttg aggtgtaagt aacgaccgca
     5341 cgagctccgc gtcggttcct tcgctaaaac ctgcctgcac tggtttccaa taatctgctt
     5401 cgagcgcttc agccaaaatt gcggcagcaa ctgttttccc aacatcagtt ccaatccccg
     5461 ttataaagat cacatttgac atacagcata tactttttga aattcagccc gcagtagctt
     5521 caaaaaacga aaaaacagtc gtgccataat ttcttttaaa gccgaatccc gcatagcttt
     5581 cgtagttatt acgcggggtg tgctcgagaa cgaaaaggcc tccgggcgca atcatttttt
     5641 ttgaaacgat catcttcggc aactcatcaa ttgtattcaa cgcatatggt ggaccggcaa
     5701 aaataaaatc gtactcgccg ttgtccgctg ccaaaaactt aaacacgtcc atcctgatga
     5761 ctttgcaatt ttcaattttg aactgttcga tatttttttt aatgaatgta aacatggccg
     5821 gatccttttc cacgactgta agatctaccg caccccttga tgcaagttca tatgtgatgc
     5881 tgcctgtccc tccaaaaaga tctaacgttt tcgctccttc aagctgaatc cttgtttgta
     5941 taatattaaa caatccttct ttcgcgatat cggtggtcgg ccgcgtgtac ggcattttgg
     6001 aaggaggatt tattctccgt ccgccgagcg atcctgagat gatcctcata acacataatt
     6061 tgcatacggt aaaaaataat gcaaagagta atctttgaat tcaccggttg caaacactgc
     6121 ttcatcgacg gctgcgggtc ttaaaccttc gaggtactga tataatgttt gatataattt
     6181 agattgctca tcgatgaaac cgcctgttag gatctccgtg ctgttactaa tcttgtactg
     6241 cctgaaaaca ttcaaaacaa aatacaaaac gtcgtctgcc gcgatataag attttgtctt
     6301 taagaactca agccggccgt ctttcattgc gatcaaagaa aaatagttcg gataaaaaaa
     6361 gaggtaaact ttatcatcgc cggtatttga aatcagtgaa cgcagcaagc acgcatattg
     6421 ggtgtgaaat tttacgttcg gaaaacatga ccgcaccctt tcctgcaagg caatatctat
     6481 cctcgaagca aaaagatatt gttcaacatt ttcggacaaa aaattagcgg tagcacaagg
     6541 tccaaaaagc agctcaaaat tttgtgagat aaagtgttca tcgttgcccg aaaggtttgc
     6601 aggtacacca agcgcttcgt cagtattcat gatgaaattc ggcgcttcaa ctgttgttgc
     6661 gagcaacctt gaatgcagcc gggcggcatc taatatctta tcaaatgaac tgccggtata
     6721 attatcacat tgaaaaaatt caaacgccgt tattttattt tcatccctct ccctgcacca
     6781 gaaggcaaga tgattttttc cggcctcaat aaaaaactgc ccgttatcaa tattgtcgga
     6841 atagatacta tatgtctttt gaaccatgcg tctcgtttcg gctgcaatgt tactaaatag
     6901 aaattgacag cagaagaaac aagagaaata cgatcaaact cattgatcac accggcagca
     6961 ccttcctgcc atatacttcg ttcaacacct gcgccacgca tccatagaat gccgagcctc
     7021 cgcaaatgat tccttcatac ccggcaacct ggtgcaacgt tgcatttccg gtaaagacgc
     7081 ttgcagataa caggaagaat aagatcgtga gcgtaataaa aacaacttgc agtaagcggc
     7141 tgagttttag cgtcccgacg aacatgaaga gagtaaaaac accccacagc aataaatacc
     7201 agccgatagc agtttcactt gatttatatg cggcgccgaa cgaggtggat ggtatgagcc
     7261 acaatgccac aagagaaagc cagaatgaac cgtacgccgt gaacgcggtc gcgccaaaag
     7321 tgttgttctt tttccattcc tgtagtcctg caaagatctg ggcaat
//
LOCUS       DASQJI010000497         1955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_366973,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000497 DASQJI010000000
VERSION     DASQJI010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366973"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1614)
                     /locus_tag="VEV83_13600"
     CDS             complement(<1..1614)
                     /locus_tag="VEV83_13600"
                     /inference="COORDINATES: protein motif:HMM:NF033578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HYK46207.1"
                     /translation="MINYQSQKQLRLFETPFEQHLDANNRWVQLADKLPWDDLVKIYN
                     KKLRADFGAPSIDGRMIIATLIIKHKLNLSDREVIEMIRENIYMQYFVGLSSFTTKEI
                     FHHTEFVHIRKRLQVADFNEMTEELMREAGILQSFEKSEQNDNESSQNRDGDFPNRLE
                     QTQTTEDEQTTSQQNIEQAIPHLQDEQQQYSEQNPDKEQLDNAGVMQLDATVADQKIK
                     YPNDVDLLNTGRQETDRLIDILCGQYQLRRARTYRRIARMQYLNFAKKKNKAAKQIRK
                     ARKQQLQFLKRNLKRLDEIIEQVQQHTGSLRLPFEHRDLRILWAIRLLYDQQLQMHNA
                     NTNRLDDRIVSLYQPYVRPIMRGKAKHKVEFGSKNGISLQYGYALLEKLSWDAYNECN
                     DLQPAADNYKRRHGYYPECIVADSIYHTKANKKFCEDNHIQLVGKRLSKRALSKMSSK
                     EKKEYRKLHNSRNQVEGKFGQGKNGYGLNEIKAKYANTSASWIAAVYFVMNILVFAGS
                     SFCHFFYWLYNALQAMTLKRKIPQPINDQS"
BASE COUNT          511 a          397 c          336 g          711 t
ORIGIN      
        1 ggattggtcg tttattggct gcggtatttt tctttttaaa gtcatagcct gcaaggcatt
       61 atacagccaa taaaaaaaat gacaaaaaga acttcctgca aataccagga tgttcattac
      121 aaagtacacg gctgctatcc aactggcaga tgtgttagcg tattttgctt taatctcatt
      181 taacccgtat ccatttttac cctgaccaaa ttttccttct acctggttgc ggctgttatg
      241 aagctttcga tattcttttt tctctttgga actcatcttt gacagtgctc tttttgataa
      301 tctttttcca accagttgta tgtgattatc ctcacaaaac tttttgttgg ctttagtatg
      361 gtaaatgcta tcggcaacaa tgcactccgg gtaataacca tgccttctct tgtaattgtc
      421 tgcagccggt tgtaaatcgt tacattcatt gtatgcatcc cagcttaatt tttccaacaa
      481 ggcatatccg tattgtaaac tgatgccatt cttacttcca aattctactt tatgtttggc
      541 cttgcctctc ataatggggc gcacataggg ttgataaagg cttactattc tgtcatcaag
      601 gcggttggta tttgcattat gcatttgcag ttgttgatca tacagtagtc ttattgccca
      661 cagtattctt aaatccctgt gttcaaaagg taaacgtaaa ctgcctgtgt gctgctgcac
      721 ttgttctatt atttcatcca atcttttcaa atttcttttt aaaaattgca attgctgttt
      781 ccttgctttc cttatttgtt tggctgcttt attttttttc tttgcaaaat tcaggtattg
      841 cattcttgca attcttcgat aggttcgcgc acgtcttaat tgatactgcc cgcataaaat
      901 atctatcaat ctgtctgttt cctgtctgcc ggtgttaaga agatccacat cattgggata
      961 ttttattttc tgatctgcta ctgttgcatc taattgcatc acacctgcat tatccaattg
     1021 ctctttatca gggttttgtt cactgtattg ttgttgttca tcctgcaagt gtggtattgc
     1081 ctgttcaata ttttgttgag atgttgtttg ttcatcttct gttgtttgtg tttgctccaa
     1141 tctattgggg aaatctccat cccggttctg cgaactttca ttatcattct gttcgctttt
     1201 ttcaaaagat tgcaagatgc cggcttcacg catcagttct tctgtcatct cattaaaatc
     1261 cgccacctgc aagcgttttc ttatgtgcac aaattctgtg tgatggaata tctcttttgt
     1321 tgtaaaagat gacaggccta caaaatactg catgtaaata ttttccctga tcatctcgat
     1381 tacttcgcgg tcactaagat taagcttatg ttttatgata agggttgcaa ttatcatacg
     1441 cccatcaata gagggtgctc caaaatcggc gcgcaatttt ttattgtaga tttttacaag
     1501 atcatcccag ggaagtttat ctgcaagttg gacccaacga ttatttgcat caagatgctg
     1561 ctcaaagggt gtttcaaata aacgcagttg cttttgtgac tgataattta tcatacagat
     1621 gcaaggcttt aaaacgattt ttgaaaaaaa gcttgcatcc actctgcaaa cattatgcca
     1681 caattaattg ataatcaata ttttatatct ttgtcggcaa gtcctaagta aactgtacaa
     1741 gttgtcttac aacctaaaga ccatcttccc gccgaagcat acagcattgg aaaattagct
     1801 cacgtacctc atataacact gatctctccg aaaaacattt aggcgagtta aaaagcgaat
     1861 tatcctaaat tctatgcagg taaagcagat atggagcgat gaagtgtaat atacagttgt
     1921 aaacctttat cgcttatcac caacagttta caaac
//
LOCUS       DASQJI010000498        12182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1594930,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000498 DASQJI010000000
VERSION     DASQJI010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12182
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594930"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            571..2505
                     /locus_tag="VEV83_13605"
     CDS             571..2505
                     /locus_tag="VEV83_13605"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK46208.1"
                     /translation="MRKILLGVSFLLSVAGHTQPNTVDSLQTLLQTAAEDTSKVNLLI
                     AVGKQFRYSNTDTALYFARTALNLATRLNYQMGIADSKRGISALSASQGKFDEGVKYG
                     NEALAIYNKLNLSATSAEKVKILARIGGTYQVIGHNRVSQGNYPEGLRNTLLSLRIQE
                     ELGDKPGISSVRFNLGNIYSLQHNYPEALRNYYASVKISEELGFKSDIATTYSAIGWL
                     YIQQGNYPEATKSCFAALKLAEEAKNDAALAEIYNNLGLIYNQREDYDEALKYDFAAL
                     RIYQESGIDQQLPDIYNNIGLVYMKQKKYDNAFHYFDKALSFAKKINSLELIKWSYEN
                     LAALDSTQGNYKKALEDYKFVFAYRDSLFNEENAKKLVQQQMQYDFDKKENAIKAAQD
                     KRDIITAAAIKNGKLVRNFSFAGTFAILSFGGYGFYRFRKRKKLQGQQTLMNERLRIS
                     RELHDEIGATLSGIAMYSHLTKEQIKNSQINEVEKSLNIMQQSSGEMVNKLNDIVWLI
                     NPDQDSLQKLIQRLEEYARDMAAIKNMHVHVTMPAHLHEYVLPVESRRNIYLFCKEAI
                     NNAVKYSEGTLLDVSIKQEDNKLDFSVSDNGKGFDTFTVRRGNGLENMQRRADEIGAN
                     LLLKSEKGEGALVCMQLKIT"
     gene            2678..3325
                     /locus_tag="VEV83_13610"
     CDS             2678..3325
                     /locus_tag="VEV83_13610"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46209.1"
                     /translation="MDIRVAIFEDNKLVRDALQTILNGTNGFMCTGAFTDGNRWLIDI
                     KRSEPDVVLMDIEMPGISGLELTKKICESFPKIKILIQTVFNDSEKIFLALCAGASGY
                     ILKNDPPHKYLEAINEVYNGGAPVSPSVAKKLLGFFSNKNVILVSPGDTDYQLSEREK
                     ELLGLMVEGLNYKAIAERAFISYETVRTHVKHIYRKLHVASRSEAVMKAIQQRLS"
     gene            3464..4408
                     /locus_tag="VEV83_13615"
     CDS             3464..4408
                     /locus_tag="VEV83_13615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46210.1"
                     /translation="MKRNLITTLNIVLFAGTILTSCKKENASAESTVVTNDLQVGNNS
                     SCKLTHAVYPPAIWDFTYNDKGLADIWTIDFFGSVSNFKLEYDEFNKLIKADIYDDLN
                     NLSSTVTFTYRGNILIKEAWSFILSGTSLEYLVSHNNKGQISKWDDIAGDTHILNTYD
                     NMGNCTRSDYYIGSDLYFSDIYEFNSPVRDPELTVSGVDFLFPYSGGGYFNKLWFTRN
                     LSIVYFSDGSSLTLNDLNASETDFSFGAQNFPTSVNYFDKASGSAFDITFGYSCNGNS
                     NNAFGGNKTDNSQKPTLLDRSGKSIKEQLLELRQENSK"
     gene            4478..5470
                     /locus_tag="VEV83_13620"
     CDS             4478..5470
                     /locus_tag="VEV83_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46211.1"
                     /translation="MKKSIVVTYALMLFAGTILTSCKKENASAENTGVTNDLQVGNNS
                     SCKLTHNDWPDIFTWDFHYNDKGLADEWRIAYPYGYVQNFKLKYDRFNKLSKADAYDD
                     FDNLIFTDSFTYSGNRLVSLKWADLLAGADGDVLFTYNSKGQIIREDDGGTHQDMTYD
                     NMGNCIRADYYDGTYFYFSDRYTFENNVRNPLLTVSGVDFMFPYAGVGFFNKLWFTNN
                     LSIFYDTDGTEYVLNDFDVSQTVFTTNQQNFPTSANYYNKISQGPLDLTFGYSCNGSD
                     NFTNQGSAQSNNAMAANKTGLHQGPMLLRMGSAKSMRARVTELVKQMKAQQQSN"
     gene            5711..7297
                     /locus_tag="VEV83_13625"
     CDS             5711..7297
                     /locus_tag="VEV83_13625"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46212.1"
                     /translation="MKHIFTTSIFVFLSLISFSQAGTLDKSFSVDGRVVIGFKYGTRL
                     GEDDCFDMALQADGKSVLVGASNGTKSGVFDFAIVRLNTNGTLDQTFNNKGYTFINFL
                     GNDEAVAVAIQSDGKIVVAGVADFDGIPKVALVRLLTNGTPDPTFGSNFSGKVITDFG
                     DTAYAVDVAIQTDGKIVVAGAYYGSVIECMLLRYNTDGSLDQSFGVLGRSFTNFGWGE
                     TANSLAIQSDGKIVIGGNAHNDYVSHFIVARFKATGFLDGNFGNAGKRIARFGYTDHC
                     ASIAIMGNGKIVAVGNTNVDADQDIAIARFDTYGTIDNTFSGDGKVLTDFSTTGSMDY
                     AKDVAVQSDGKIIVAGATALTYNLNFALLRYNSNGTLDNTFSGDGKTQTDFGASQYGD
                     DDEAYAVKIQSNGKIIAAGARNTNISGNFIAARYNGDNATPNVFASDANIENSTTNES
                     LSTIHLYPNPVSTALHVEGLNPSFSATISITDLSGRVFQTAVVTSGECSFDVSRLKPG
                     VYELTAVANNVVTRRKFIKQ"
     gene            7598..9652
                     /locus_tag="VEV83_13630"
     CDS             7598..9652
                     /locus_tag="VEV83_13630"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46213.1"
                     /translation="MKKIKLQLLQILFACLFLTEISAQDLYTGVWRGGTDGYALYGGL
                     TWNSFVSKWQTLASQNLRLVDISTYLKNGTRYYNGVWRAGTDAYALYGGVTWSDFVTE
                     WQTLAGQGLRLIDIETYVSNTTRLYVGVWRAGTDGYALYGGLNWNDFVAKWQQLAGQN
                     LRLIDVATYISNGTRVYTGVWRAGTDGYALYGGVNYSDFVAEWKTLAAQNLRLISVTS
                     YLENSTRLYVGVWRGGSDGYALWNGTDWESTTSKWAELAASNLRLICLDTYDSDCSDN
                     CLNNVLMDDDPSTSWRDTYDYQIKAGKYHCEGSPTTCPLPGANDVVTYSWPNLHIGTN
                     YWARNSVLFDAKDKIFTLPFTEIASNMGHNAWLYSPGSWHHAIDYYEHVTKTFQITAA
                     APGKVIYIGWDVWSGNTMVISHDVGTKKDVYRTIYMHLQDGPLHDCDKAWTETVPTLS
                     GSTLTNYKTYLNNTGCPLDKTQRNPTVANWGKNSQKIDHTLLNTTVTAGQQVAWAGST
                     GPGGCGCADDGTTNANTHLHIFFAHRDPVDNHWYFFDPYGIYSDPSCYPTGVNDAITT
                     SCARYPISWKNGKPGYPAAPQPNVTEEPVFASDIATGILISPNPSTGNITITYNSGKT
                     GSVDLAVYDKTGMVVFRKTDYALTGNNNYHLNFSNFIAGVYYVEINNNGIKSRDKFII
                     NK"
     gene            9938..10249
                     /locus_tag="VEV83_13635"
     CDS             9938..10249
                     /locus_tag="VEV83_13635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46214.1"
                     /translation="MMLREKIILACIITSLTIQFLPSRTYDNTGCDKTSESSSVIVSN
                     NADDLDEDDAARFFFTADQASAMCRNVYRESENLSNHSVPIYCNYLTDIITPPPEKTA
                     C"
     gene            10546..>12182
                     /locus_tag="VEV83_13640"
     CDS             10546..>12182
                     /locus_tag="VEV83_13640"
                     /inference="COORDINATES: protein motif:HMM:NF036398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46215.1"
                     /translation="MKIKLTLLHLVIAFVIVTKISAQDFYTGVWRAGTDGYALYGGLT
                     WSSFVSKWSSLASSNLRLVDISTYTKSGIRYYNGVWRAGTDGYALYGGVTWSDFVAKW
                     QELGAQGLRLIDIETYLSGTTRLYVGVWRAGTDGYYLYGGLNWNDFVTKWQQLGAANY
                     RLIDVASYLSGTTRLYTGVWRAGTDGYALYNGLNWSQFTAKWQELAAQNLRLINISSY
                     VSGGVRVYLGVWRGGTDGYALWNGTDWESTTSKWAELGSQNLRLINLETYDSQCADDC
                     LNNVLMDDNPGTSGRDTYNYGITAGTYHCEGKPGTCPIPSPGDVVYYRWPNLKIGSTY
                     YSRNSALFDAKDQIFTLPFNEAASNMNHNGWLYSPGSWHHALDYSKKVVGTFQITAAA
                     AGRVIYIGWDNWSGNTMVISHDVGLKKDVYRTIYMHLRNGPSTDCSKAWSATVPTLSG
                     SNLTNYKNYLNSTGCPLTTSQRNPDYAHWGSNAQKIDMTLLNKTVSAGQAIAWAGSTG
                     PGGCGCTDGTTNENTHLHIFYAHRDPVDGKWYFFDPYG"
BASE COUNT         3644 a         2500 c         2759 g         3279 t
ORIGIN      
        1 taggttggta tgacgggaga acaatttctt ggcatttatg ttttttcgtg cttattgtgc
       61 tctataaaaa atccaggagc acgaagtgca ccacgaacca cgaagtacac taagatttga
      121 acgagacaaa tattttttca tctcacactt tgtgttcatc gtgtcttctt cgtgctcgtt
      181 gtgctccaaa ataaattcag ggagacgaag tgcaccacga atcacaacgg acacaaagat
      241 tcgaacgaga cgaatacttt ttgatcccac tttgtgttca tagtgtcttc ttcgtactcg
      301 ttgtgctcca aaacaaattc acggacacga agtacacgac gaaatcacaa caaagattcg
      361 aacgagacga atactttttg atcccacttt gtgttcatcg tgtcttcttc gtgctcgttg
      421 tgctccaaaa taaattcagg gacacgaagt gcacgacgaa tcacaacggg accgttctat
      481 ttaatttttt tcctaaactc atattaaggc tttacattta gaaacgacaa aacaactgtt
      541 ccaccaacgc caggtgctaa taacaaagcc atgagaaaaa ttctgttggg cgtttcgttt
      601 ctgctatccg tggcgggcca tactcaaccg aataccgttg actcgcttca aacacttttg
      661 caaacagccg ctgaagatac cagtaaggtc aacttattga ttgccgtggg caaacaattt
      721 cgttattcaa atactgacac ggcattatac tttgcaagga ctgcgctcaa ccttgcaacg
      781 aggctaaact atcagatggg gatcgctgat tcaaaaagag gaataagcgc actatctgcg
      841 agccagggaa aatttgatga aggtgtaaaa tatggtaatg aggcgctagc catatataac
      901 aaattaaacc tgtccgcaac atctgcggag aaagtgaaaa ttttagcaag aattggaggc
      961 acctaccagg tcattggcca caacagggtc tcgcagggaa attacccgga agggctgagg
     1021 aatacgttac tttctttaag gatacaagaa gagctcggag acaaaccagg catttcatcg
     1081 gtccgattca atcttggaaa tatttattct cttcaacaca attatcctga agcgctcagg
     1141 aattattatg cctctgtgaa aataagtgaa gagctgggat ttaagtcaga catcgccacc
     1201 acctacagtg ctataggctg gctttatatt caacaaggga attatccgga agcaacaaaa
     1261 agttgttttg cggctttgaa actagctgag gaagcaaaga atgatgcagc gctcgcggag
     1321 atttacaata acctcgggct tatatataat caacgggagg attacgatga agcgctgaag
     1381 tatgatttcg ctgccttaag gatataccag gaatcgggca tcgaccagca acttccggat
     1441 atttataata acataggcct ggtgtatatg aagcaaaaga aatacgataa tgcctttcac
     1501 tattttgata aggcattatc ctttgcaaaa aagataaaca gtttggagtt aattaaatgg
     1561 agctatgaaa atttggctgc gctggatagc acacagggca attataaaaa agcgctggaa
     1621 gattataagt tcgtgtttgc ctatcgtgac agtttgttca atgaagagaa tgcaaaaaaa
     1681 ctggtgcagc agcagatgca atatgacttc gacaaaaaag aaaatgcaat aaaagcggcg
     1741 caggataaaa gagatataat cacggccgct gcaataaaaa acggaaaact ggttcgtaat
     1801 ttttctttcg cgggaacgtt cgccatcctt tccttcggcg gttacggctt ctaccgtttc
     1861 cgcaagagaa aaaaattaca gggccaacaa actttaatga atgaaaggct tcgcatcagc
     1921 cgtgaactgc atgatgaaat aggagccacg ctcagcggaa ttgccatgta tagccactta
     1981 accaaagaac agataaaaaa ttcacagatc aatgaagtcg aaaagtcatt aaatatcatg
     2041 caacaatcat ccggggagat ggttaataaa ttaaatgata ttgtatggct gataaatccc
     2101 gaccaggatt ctttgcaaaa gctcattcag cgtttggagg aatatgcccg cgacatggcc
     2161 gcaattaaaa atatgcacgt gcatgtgacg atgccggcgc atttgcatga atacgtttta
     2221 ccggtggaat cgcgccgcaa tatttacctg ttttgcaaag aagcgatcaa caatgccgtt
     2281 aaatatagtg agggaacctt gcttgatgtg agtataaaac aagaagacaa caaactggac
     2341 ttttctgtga gcgataacgg aaaaggcttc gatacattca cggtaaggcg cggcaatggc
     2401 ctggagaata tgcagaggcg tgcagatgaa ataggcgcta atcttctcct gaagtcagaa
     2461 aagggtgaag gggcacttgt ttgcatgcaa ttaaaaatca cctgatgggg tattgagatt
     2521 gcggatttgg gattgcagat ttgcggttat aactggtagc agtataatga tttttaaaat
     2581 agtgaattgt gccagctgct ataaaagcaa aatgctaaac acataaaatc attactaaat
     2641 tattttaagt cgtcgtgaat tgccgggcgg gaacgttatg gatatacggg ttgcaatatt
     2701 tgaagataac aaactggtga gagatgccct gcaaaccatt ctcaatggca ccaatggttt
     2761 tatgtgtacg ggcgctttta cggacggtaa caggtggctt atagatatta aacgcagtga
     2821 acccgacgta gtactgatgg acattgaaat gccgggtata agtggacttg aactaacgaa
     2881 aaaaatttgc gagtcatttc ctaaaatcaa aattcttatt caaactgttt ttaacgacag
     2941 cgaaaaaata tttcttgcct tatgcgctgg tgcatcaggt tatattttga aaaatgaccc
     3001 gcctcataaa tacctggaag ctattaatga ggtatataat ggcggagctc ctgtaagccc
     3061 ttctgttgct aaaaaattgc tcggattttt tagcaacaaa aatgtgatat tggtctcccc
     3121 cggagatacc gattaccagt tgagtgaacg cgaaaaagaa ttactcgggc tgatggtgga
     3181 gggccttaac tacaaggcca tcgcggaacg agcgttcatc agctatgaaa ccgtgcgcac
     3241 ccatgtaaaa cacatctaca gaaaactcca tgtggccagt cgaagtgaag cggtgatgaa
     3301 agccatacag cagcggctat cctgatcttt taaaataccc cattggggta ttgtttctgc
     3361 ctttacagta aaggtatttt gggttgaaaa aattattgca cgcggtggat agcgagatcc
     3421 cattccgctt tcaccggatt tattcaccaa aaaattctct aaaatgaaaa gaaatctgat
     3481 taccacatta aacatcgtac tgtttgccgg cacaattctt acaagctgta aaaaagaaaa
     3541 tgcgtctgca gagagtaccg ttgtaacaaa tgatctgcag gttgggaata actcctcatg
     3601 caaattaaca cacgcggttt atcctcctgc catatgggat tttacttata acgataaagg
     3661 attagctgat atatggacaa ttgatttttt cggttctgtt tctaatttta aactggaata
     3721 tgacgaattc aataaactta ttaaagctga tatctacgat gatcttaata atttatcttc
     3781 aaccgtcacc ttcacttaca ggggcaacat cttaataaaa gaggcctggt cgtttattct
     3841 ttcaggaaca agtttagaat atcttgtttc ccataacaat aaaggacaga tatcaaagtg
     3901 ggatgatatt gcgggtgata cccacatact taatacttac gataacatgg ggaattgcac
     3961 ccgaagcgac tattacatag ggagcgatct ttatttttcc gacatctatg aatttaattc
     4021 gcctgtaaga gatccggagc ttaccgtttc cggagttgat tttttgttcc cgtattcagg
     4081 aggaggctat ttcaacaaat tgtggtttac ccgcaacctg tctatagtat attttagtga
     4141 tggcagttcg cttaccctga atgacctgaa tgcttcggaa actgatttca gtttcggcgc
     4201 ccagaatttc cctacttcgg tgaattattt tgacaaagcc tcaggcagcg cgtttgatat
     4261 tactttcggc tacagttgca atggcaacag caataatgct ttcggcggca ataaaaccga
     4321 taacagccag aagccaacgc tcctcgatcg ctcaggaaaa tcaatcaaag aacaattatt
     4381 ggaattgaga caagaaaata gcaagtaagc aatttcgctt ttcgtcttcc ccttagctaa
     4441 acaatttttt attcaacaat caaaaaataa aaacgttatg aaaaaaagta ttgtcgtcac
     4501 atacgccctc atgctctttg ccggcacaat tcttacaagc tgtaaaaaag aaaatgcgtc
     4561 tgcagaaaat acgggtgtaa caaatgatct gcaggttggg aataactcat cctgcaaact
     4621 gacacacaat gactggcctg atatcttcac ctgggatttt cattataatg ataaaggatt
     4681 ggccgatgaa tggagaattg cttacccgta cggctatgtt caaaacttta aactgaaata
     4741 tgacagattc aacaaactta gcaaggccga tgcctatgat gattttgata atttaatttt
     4801 taccgactct tttacgtata gcggcaatcg tttggtttca ctaaaatggg cagacctgct
     4861 cgcgggtgcg gatggagacg tgctttttac gtataacagc aaggggcaaa taataaggga
     4921 agatgatggc ggcacccatc aggacatgac ttatgataat atgggaaatt gcatccgtgc
     4981 tgattattat gatggaacat acttttattt ttccgaccgg tatacatttg aaaacaatgt
     5041 gagaaatcct ctactgaccg tctctggtgt tgatttcatg ttcccgtatg ccggagtcgg
     5101 cttttttaat aagctgtggt ttacaaacaa tctttctatc ttctatgata cggatggcac
     5161 tgaatacgtt ttgaatgatt ttgatgtttc tcaaacggtt ttcactacca accagcagaa
     5221 tttccccacc tcggcaaatt attacaataa gatttcacag ggcccactgg accttacatt
     5281 tgggtatagt tgtaacggga gtgacaattt cacaaaccag ggttctgcac aaagtaacaa
     5341 tgctatggcg gcgaataaaa caggtttgca tcagggtccg atgttgttgc gtatggggtc
     5401 tgccaaatca atgagagcgc gcgtaacaga actcgtgaag caaatgaaag cacaacaaca
     5461 gagcaattag gtctgttcag gcgaataaag aatgttgtaa ggctgctggt atttccggca
     5521 gccttatttg ttggcattaa tcaacgccgg gaaccatgca acagccggat gcggaaactc
     5581 cggcacaaca agcacatgat tgagggaaca attgatggcc tccctcacat tcgggattga
     5641 ctttggctcg ccgttgaact attttgctct ctgtttgacg ctcattttct cacttgaaaa
     5701 ttgaaaaacc atgaaacaca tttttacgac ttcaattttt gtatttcttt ctttaataag
     5761 tttttcccag gcaggcacgt tggataaatc cttcagtgtt gacggaagag tcgtgatcgg
     5821 ctttaagtat ggaacccggc tgggggaaga cgattgcttt gacatggccc tccaggcaga
     5881 cggaaaaagt gtactcgtag gtgcaagcaa cggcacaaaa tcaggcgtgt ttgattttgc
     5941 aattgtgcgc cttaatacga atggtacgct tgatcaaaca ttcaacaaca aaggctacac
     6001 attcataaac tttctcggca atgatgaagc agttgctgtg gcgatccagt ctgacggcaa
     6061 aattgtggtt gcaggagtcg cagatttcga cggcattcct aaagttgctt tggtgcgcct
     6121 gttgacgaat ggtactcctg acccaacatt cggaagtaat ttttccggga aggttatcac
     6181 cgatttcggt gacactgcct atgcagtcga tgtagcaatt caaacagatg ggaaaatagt
     6241 ggtggccgga gcctattatg ggtcggttat agaatgcatg ctgctgcgct ataacaccga
     6301 tggctcgctc gatcaatctt tcggtgttct tggacgatca tttacaaatt tcgggtgggg
     6361 ggaaacagca aactcattgg ctattcaaag cgacggaaaa atcgtcatcg gcggaaatgc
     6421 tcataacgat tacgtgtctc attttatcgt ggcgcggttt aaggcaactg gctttcttga
     6481 tggaaatttt ggcaatgccg gtaaaaggat tgctcgtttt ggatacacag atcactgcgc
     6541 ttccatagca atcatgggca acgggaaaat agtggctgtt ggtaacacca atgttgatgc
     6601 tgaccaggac atagcaatag cgcggttcga tacttatggg acaattgaca acactttcag
     6661 cggcgacgga aaagttctta ctgacttcag cacaaccggc tccatggatt acgcaaaaga
     6721 tgttgctgtg caaagtgatg gtaagatcat tgtcgcaggt gctacagccc ttacttacaa
     6781 tctgaacttt gctttactgc gttataatag caacggaacc cttgataaca cattcagcgg
     6841 agacggaaaa acccaaaccg attttggagc tagccaatat ggtgatgatg atgaggcgta
     6901 tgcggtaaaa attcaatcga acggaaagat aattgctgct ggcgcgcgaa atacgaacat
     6961 ctcaggaaat ttcatcgctg caagatataa tggggataat gcaacaccga acgtttttgc
     7021 aagcgatgca aacatcgaga attcgacaac aaacgaaagt ctgtctacta tacatcttta
     7081 tccaaatccg gtctcaactg cactccatgt tgaaggatta aatccatctt tttcggcaac
     7141 gatctcaatt acagatttaa gcggaagggt ttttcaaacc gcagttgtta cgagcggtga
     7201 atgcagcttt gatgttagta gattgaaacc aggagtgtat gaattaaccg cagtcgccaa
     7261 taatgtagtt acgagaagga aattcattaa gcaatgaaga tgcattgctg atcatcgatc
     7321 atctgtcccg ttgtgtttta aaaatatgta acacaaagcg cacaaggaac cacaacggcc
     7381 acaatgaaat tcgtaaaaat aaatcaggac gtgttgcaca tgcgtgatac atgttgcgag
     7441 gattaccgct tcaattcttc gtggcctttg tgtatgcttc gtgcccgttg tgttccaaaa
     7501 atcacggagg cagaaataca ctgttcaaca ttgacttttg agtgagctgt aatgaaacga
     7561 ataaataata agcctcatca caattaaaat tttaatcatg aaaaaaatca aactccaatt
     7621 attgcaaatc ttatttgcat gtttgttcct tacagaaatt tccgcccagg atctatacac
     7681 aggtgtctgg cgtggcggca ctgatggcta cgcgttgtac ggtggcctca cgtggaattc
     7741 tttcgtaagt aaatggcaaa ctctagcgag ccagaacctg cgcctcgttg acatctccac
     7801 gtatctgaaa aacggaacgc gttattataa tggtgtgtgg cgtgccggca cagatgcata
     7861 cgctttatac ggcggtgtta cctggagcga tttcgttacc gaatggcaaa cgcttgcggg
     7921 gcagggtttg agattgatcg acattgaaac ttatgtatca aacaccacac gattgtatgt
     7981 gggagtttgg cgcgcaggca ccgatggata cgctttatac ggcggcctga actggaacga
     8041 tttcgttgca aagtggcaac aactcgccgg gcaaaatctt cggctgatcg atgtagcaac
     8101 gtatatctca aacggaacac gtgtatatac tggcgtgtgg cgcgcaggaa cggatggcta
     8161 cgctttatac ggcggtgtca actatagcga cttcgttgca gagtggaaga cccttgccgc
     8221 gcaaaacctt cggctcataa gcgttaccag ctatttggaa aacagtacac gtttgtatgt
     8281 tggagtatgg agaggaggaa gcgatggtta tgcactatgg aatggcacgg actgggaaag
     8341 cacaacatct aaatgggcag agcttgccgc gagtaaccta cgcttgatct gccttgacac
     8401 ttatgacagc gattgctcag acaattgttt gaataatgtg ttgatggatg atgatcccag
     8461 cacaagttgg cgggacacgt atgactacca gatcaaagca ggcaaatatc attgcgaagg
     8521 aagcccaact acttgtcctc ttcctggtgc aaatgatgtg gttacttata gctggccaaa
     8581 cctgcatatt ggaactaatt actgggcacg gaactcagtg ctgttcgatg cgaaagacaa
     8641 aatatttaca ttgcccttta cagaaatcgc aagcaacatg ggccataatg cgtggcttta
     8701 tagtccgggt tcatggcatc atgcaattga ctattacgaa catgttacaa aaacgttcca
     8761 gatcacagca gcagctcctg gcaaagtaat ttatatcggc tgggatgttt ggtcgggcaa
     8821 cacaatggtc atcagtcatg acgtaggcac taaaaaagat gtttaccgta cgatctatat
     8881 gcatttgcag gacggacctc ttcacgattg cgataaggcc tggactgaaa cagtgcccac
     8941 tttatccggt agcacgctca cgaattataa aacctatctc aacaatacag gatgtccttt
     9001 agataagacc caacgcaatc cgactgttgc taattgggga aagaattctc aaaagataga
     9061 tcatacattg ctcaacacaa cagtcaccgc tggtcagcag gttgcatggg ccggcagcac
     9121 tggtccgggc gggtgcggct gtgctgatga tggaacaacg aatgcgaata cgcatcttca
     9181 tatcttcttt gcacatcgcg acccggtgga caatcattgg tatttctttg atccgtatgg
     9241 catttattct gatccatcat gttatcctac gggcgtgaac gacgcaatca cgacgtcttg
     9301 cgcgcgttat ccgatctcgt ggaaaaatgg aaagccgggt tatccggcag ctccgcaacc
     9361 aaatgtcacc gaagagccgg tctttgcaag tgatattgcg accggcattc tgatttctcc
     9421 gaatccatcc accggtaata ttacgatcac atataatagt ggcaaaaccg gaagcgtaga
     9481 cctggcagtg tacgataaaa ccggaatggt tgtgtttagg aaaacagatt acgcgttaac
     9541 cggcaacaat aattatcatt tgaacttttc gaattttatc gcgggagttt actatgtgga
     9601 aataaacaat aatggaatta agtccagaga caagttcatc ataaacaaat aaaaaagagt
     9661 aagaagctac caggaacgcg ctggcttccg ttcggacaca gaatcgtcga tttagaaaag
     9721 acgatgacgc aggtagtgaa cccacaataa ggtgatccct gtttttttaa gcagggatca
     9781 ccttatctta ctaatatatt ttcacattta taaatggaac taaattgtaa taatgactga
     9841 tgtggcggtg gcatcctggt ttcagcgttt ttcgctcgct atgtcgggag ctttatctat
     9901 tccttgtttt atttggattt ttgattaact ttcatttttg atgttgagag aaaagatcat
     9961 attggcttgc ataattacct cgctaaccat tcagttcctg ccctcacgaa catatgacaa
    10021 cacgggatgc gataaaacat ctgaaagcag tagcgttatt gtttcaaata atgctgatga
    10081 tcttgatgaa gatgatgccg ccaggttttt tttcactgct gatcaggcat cagcgatgtg
    10141 cagaaacgtc tatcgtgaga gcgaaaatct ttctaatcat tctgtaccca tctattgcaa
    10201 ttacctgacc gatatcatca cacctcctcc agagaaaact gcctgttgaa acttgtctct
    10261 ttaaaagttg cttattaaga tttcacaccg aatctcacct gcaaattttt gacacgttct
    10321 ttctaaaaag atcatccaat aaaaattgct tttatgaaac cgaaattttt actcgttatc
    10381 ctgtgcgctg catcgtggtc ttcacagtgc acataaaaca ccttccacat tgcacagcca
    10441 cttttccctg taaaaaacca aactcccact attaatagtt acacagctta actactgatc
    10501 tagatcggct aaaaaactta tttcgaaaca tcaaaacaat caaacatgaa aatcaaatta
    10561 accttgttgc acttggtaat tgcatttgta atcgttacca aaatttcggc gcaggatttt
    10621 tacactggtg tttggcgagc cgggactgac ggctacgctt tatatggagg gctcacgtgg
    10681 agtagtttcg taagtaaatg gtcctcctta gccagttcga atctgcgcct cgttgacatt
    10741 tcaacataca ccaaaagtgg aatacgttat tataacggtg tctggcgtgc gggcacggac
    10801 ggatacgcat tgtatggcgg cgttacctgg tctgattttg tcgctaaatg gcaggaactt
    10861 ggtgcacagg gtttaaggct gatcgatatc gaaacgtatc tttcaggaac aacgcgatta
    10921 tatgtgggcg tatggcgtgc gggtaccgac ggctactacc tatatggcgg tttgaactgg
    10981 aatgattttg ttacgaaatg gcagcaattg ggagcagcaa attatcggtt aatcgatgta
    11041 gccagctact tatcagggac aacacggcta tacacaggcg tgtggcgtgc gggcacggac
    11101 ggatatgcat tgtataacgg attaaactgg agtcagttca ctgcaaaatg gcaggaactt
    11161 gccgctcaaa atcttcggtt gataaacatc agcagctacg tttcgggtgg cgtgcgagtt
    11221 tatttgggag tttggagagg aggaactgat ggctacgcgc tgtggaatgg aacagactgg
    11281 gaaagcacga cgtcgaaatg ggcggagctc ggctctcaga atttaaggct gataaacctg
    11341 gaaacatacg atagtcaatg cgctgatgat tgtctcaaca atgtgttgat ggatgataat
    11401 cctggcacca gtggcagaga cacttacaat tatgggataa cagcaggtac gtatcattgt
    11461 gaggggaaac cgggcacatg ccctataccc agcccgggcg acgtagtata ttaccgttgg
    11521 ccgaacctga aaatagggtc gacttactat tcgcgcaatt cagcactgtt cgacgcaaag
    11581 gaccagatat tcactttgcc atttaatgaa gccgcttcaa acatgaatca caatggatgg
    11641 ctgtacagtc cgggttcatg gcatcatgcg cttgactatt caaaaaaagt tgtgggcacc
    11701 ttccagatca ctgccgctgc cgccggacgc gtgatctata ttggatggga taactggtcc
    11761 ggcaatacga tggtgataag tcacgatgtg ggattaaaga aagacgtgta ccgcacgatt
    11821 tatatgcatt tgcgaaatgg cccttcaact gactgtagta aagcctggtc agcaacggtg
    11881 ccaacactct ccggaagcaa cttgactaat tataaaaatt acctgaattc taccggatgt
    11941 ccgctaacta cgtcacaacg aaatcctgac tatgcgcatt ggggatcgaa tgctcaaaag
    12001 attgatatga cgttgctcaa caaaacggtc agcgcagggc aagcgattgc atgggcaggc
    12061 agcaccggtc cgggcggatg cggttgcacg gatggaacaa caaacgaaaa cacgcatctc
    12121 catatttttt atgcacacag agacccggtt gatggcaagt ggtatttctt tgatccgtat
    12181 gg
//
LOCUS       DASQJI010000499         8143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2057813,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000499 DASQJI010000000
VERSION     DASQJI010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8143
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057813"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="VEV83_13645"
     CDS             complement(<1..815)
                     /locus_tag="VEV83_13645"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK46216.1"
                     /translation="MKFNMSDYELTASIVLYGNDYNTVKETIDSFLRSALKVHLYLID
                     NSSSNDLRDLADNSSIEYIFNNSNLGFGKAHNVVLQNCLDQSKYHLVLNPDIKFEKGV
                     LEDIYQFMEAHHEIGQLMPKVYYSNGKLQKLCHLLPTPINLIGRRFFENMQWSKRLND
                     RYELKEFRYDRCLNAPNLSGCFMFLRAEAVRKIGRFDERFFMYMEDVDFTRRMHSVYK
                     TLFYPHVNIIHGFEKESYSNSAVLKHHINSAVKYFNKWGWIFDDQRETFNTQVL"
     gene            complement(849..1961)
                     /locus_tag="VEV83_13650"
     CDS             complement(849..1961)
                     /locus_tag="VEV83_13650"
                     /inference="COORDINATES: protein motif:HMM:NF025665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 99-like
                     domain-containing protein"
                     /protein_id="HYK46217.1"
                     /translation="MNIKFVPFYFPQFHAIPENDNWWGEGFTDWNWVKEAKPLFKDHY
                     QPRIPANGYYDLRNADVISTQISLAKDYNIYGFNFYHYWFDGKLMLETPLENFIEENK
                     DLAFCVTWANETWTRRWLGKVNDVLIEQKHSANKQVWNKHLAYLQRLFTNENYIRINN
                     RPVFVIYRPDLISNMKALMDYYNESTMQKIGHRIYWIGAKAYESLNNQWEKLVDGILR
                     FEPRYSMNTIHNGNVVLHNVDKVLRSLPERLQIPLGELKAKLSTLYTVYDYRKTCEAI
                     LKKNKQTIQHKHKIYQAAFVGWDNTPRYGKRSKIFARSNPENFRYLISNLIEQESAKG
                     NEFLFINAWNEWSESAYLEPDNVYGDAYLSVLKSLS"
     gene            complement(1951..2667)
                     /locus_tag="VEV83_13655"
     CDS             complement(1951..2667)
                     /locus_tag="VEV83_13655"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK46218.1"
                     /translation="MLLSIIIVTYNANGHIEACLSKLYENYSEDFEVIMLDGGSTDDT
                     VKTASKYIKAPNIIISEKDRGIYDAMNKAIRVATGDFLYFLGADDIWTLPPYEVKAIL
                     KEHDTIYYGNVAIKEKPGKIYGTRFWKYSIINRNICHQAIFYPRQVFKDHSYELKYEL
                     LADYVLNLKLWSDKKFKFQYIDKVFATYSIHGASSAKIDTNFRKDIVGIIYKNYGLPG
                     LIMKAFNPLVNIFRKRLYEY"
     gene            complement(2754..4079)
                     /locus_tag="VEV83_13660"
     CDS             complement(2754..4079)
                     /locus_tag="VEV83_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008755 - O antigen polymerase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen polymerase"
                     /protein_id="HYK46219.1"
                     /translation="MNSGDFFLLLYGNLWLYFLSLVISFFSFFVFYKRYFISIWDPIL
                     VSLVFSAFACATPIFLFMLGKISWFYFLVFLSTQLAFLVGLLVCKPLNPRVENSTIYK
                     LEHEQLAFKIFFILVFFIHLILQLYIYKENGIPVFMFSKLEIYGAADILQFENRIVTI
                     LYPFLSFCAVYFLFTKKSFGFRIFTWIAIIWVIINGILSASRGFFLIIGESIFILLIF
                     YDTLETKFTFIKFRMLERKMILWSIVFALLVIMVQFSDGSNPFYVLAYRLAASGDSYY
                     MSLPNGVIDQMDHGHGLISIFSSPLKMFGLIKDSQMPESIGYQLVHYYTPGLDFTGPN
                     SRHTLIGYLYLGLGGAIVFSFTLGFVASFVRNILYYVCRKNKLTVLLYLGLLIFVSKF
                     EMDYFTAQSYFINFLLFIIPLLVTAIFLAELLKFKPLAKPDNQKHLIET"
     gene            complement(4092..5093)
                     /locus_tag="VEV83_13665"
     CDS             complement(4092..5093)
                     /locus_tag="VEV83_13665"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HYK46220.1"
                     /translation="MKSFKFLIIVLTMISCAHRNISAQPNESDKTFFTKPRFGVIVHF
                     LYQLQNENPEWNDGKKTSWDSCVNDFNVQKFANQLAEIKADYVIFTIHQKTQYMCIPN
                     EAFEKITGLKRGEATSNIDLIAKLSRELQKRNIKLFLYIPGDGPYGNTFLRDKFTYGF
                     TPGGTLKINQNYLEKWTSVIKEISLRYKDKVTGWWVDGCDPSKGFNNAVFKQLEDAMK
                     AGNPKALVAFNYAYDKSPYMDSSIGDYSAGEEYNLKYFPSKDSVVPQNKYWHISSFVG
                     KSWTSSGIRFTDNYLSKYMSTCLRSGSVTLGVAINRNGEIQRDQLGQLVRTAASRKR"
     gene            complement(5090..6241)
                     /locus_tag="VEV83_13670"
     CDS             complement(5090..6241)
                     /locus_tag="VEV83_13670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYK46221.1"
                     /translation="MRIVFVTHYAELYGANRSLIDLITGIRKLHPAFDPMVILPFEGK
                     MTNKLKCLKVDYRVIPFHSSVTIEASSKTKAFFKGLAKLLINRLLLLKHSAALRRFNP
                     DIVHSNSSVFSFGSQLAAKLKKPHVWHIREFVYEDYHYKYSLGELAFRKQLNRAACAI
                     AISSAIRNKRCQHLLCECETIYNGVVFEEDIIRKTKGERFVFGMVGIITRGKNQLEGI
                     KAFGRLANEYSDISLKLYGDFADENYETEINDYIHTHDLARRIRFEGHKESINEIFKN
                     IDCLIQPAHHEAMGRVTAEAMSYGVPVAGYDGAATSELLTHDKNGLLYKTEDQLYRIL
                     KEYLKNDSMYNRLSLESIKTVKERFTIDKYAANIFSVYKRILTHKLQAT"
     gene            complement(6282..7190)
                     /locus_tag="VEV83_13675"
     CDS             complement(6282..7190)
                     /locus_tag="VEV83_13675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK46222.1"
                     /translation="MANHESGRSLGYPQPIIAIAAKRRCHYKPNGKADALIVINNGST
                     DGTSEWLTTQKHVTAINKNNDGSAGAYYAGIKHAYCKGFDYIWLMDDDGIAFDNALEE
                     LINAAQIVPDFSFLCSKVISADGSFMNVPSVDTSLSKYDYPVWGQYAENGITRVKNAT
                     YISLFINSAHLKAAGLPSKDFFFWADDIDFTARLYKQAPGYMVGKSIVKHLRINPSIP
                     SILNEMDKKRLKLHYYNIRNGLYLSKRDNRKTIYFIDLLAHARNMFVSLLKTYGFMRF
                     RIYLRAFFASFFFKPRIEYLDAQAGH"
     gene            complement(7198..>8143)
                     /locus_tag="VEV83_13680"
     CDS             complement(7198..>8143)
                     /locus_tag="VEV83_13680"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYK46223.1"
                     /translation="CSILLALAGFKYWSLIWSQYVITIVTWLLLYNTSGYSLYTRRKK
                     IIVKSFLLTRSVIGKLIGFNTVNYWARNADNLLVGKYYGTADLGIYSRAYQMLTLPLA
                     LITGIFTTVLYPSLVRYKERGGDVENEYAFVLKLISFINFPLAVLLLLLPKQFVHILW
                     GDQWMMVAQLLPYFGVLILSQTLFSTLGTILLIEKHEKALMYSGWIGAVCMVGGIVYG
                     LFISLTAVAAFYALAYIALALPFNLIYVVHHKLKFKKITRLLLPQVILSVLIWISIYY
                     HRNDLLAAALIVWILTIVFNSLPELKKLVFLRRKSHLV"
BASE COUNT         2452 a         1674 c         1554 g         2463 t
ORIGIN      
        1 agcacttgcg tattaaaagt ctcacgctga tcgtcgaaaa tccagcccca tttattaaaa
       61 tatttaacgg cagaattaat gtggtgtttt agcacagctg agttgctgta agattctttt
      121 tcaaatccgt gtatgatatt cacatgcgga taaaataaag ttttatagac agaatgcatc
      181 ctgcgtgtaa aatcaacatc ctccatatac ataaaaaaac gttcatcgaa gcggccgatt
      241 tttcttacgg cttcagcacg taagaacata aaacaaccag acaggttggg cgcattcaaa
      301 catctgtcat atcgaaattc ttttaactca tatctatcgt tgagcctttt cgaccattgc
      361 atattttcaa agaatcgcct gccaattaaa ttgatcggtg ttggtaacag gtgacacagt
      421 ttttgcagct tgccattgga ataatagacc tttggcataa gttgtccgat ctcgtggtgc
      481 gcttccatga actggtaaat atcttctaaa acaccttttt caaactttat atccggatta
      541 aggacaaggt gatactttga ctggtcaagg cagttctgaa gaactacatt gtgagccttc
      601 ccaaatccaa ggttgctgtt attaaatatg tattcaatag agctgttatc cgcaagatct
      661 ctcaaatcat tagaagagga attatcaata agataaagat ggaccttcaa ggctgatctg
      721 agaaatgaat caatggtttc cttaacagta ttgtaatcat ttccataaag aacaatggac
      781 gccgtcaact cataatccga catattaaat ttcatcagtt actaactcag aacttttgtg
      841 tggtgtggtc aggaaagcga tttcaaaaca gacaggtaag cgtctccata aacgttatcc
      901 ggttcaagat atgctgattc cgaccattca ttccacgcat ttatgaaaag gaactcattg
      961 cctttcgccg attcctgctc gatcagattg cttattaaat acctgaagtt ttcagggttg
     1021 ctgcgtgcaa aaatttttga acgtttccca tatcttggag tattatccca ccctacaaag
     1081 gctgcctggt agatcttgtg tttatgttgt attgtttgtt tgtttttctt caggatcgcc
     1141 tcgcacgtct ttctgtaatc gtaaacagta tataaagtgg atagctttgc ttttaattca
     1201 cccaggggga tctgcaagcg ttcaggcagt gatcgcagta ctttgtcaac attatgcagc
     1261 acgacgttgc cgttatgtat tgtgttcatt gaataacgtg gttcaaacct taagatcccg
     1321 tcaaccagct tttcccattg gttattcaaa gattcgtatg ctttggcgcc gatccaataa
     1381 atacggtgcc cgatcttttg catggtagac tcattataat aatccatcaa tgctttcata
     1441 ttgctgatca ggtcggggcg gtaaatgaca aaaacaggcc ggttatttat tcttatatag
     1501 ttttcattag taaatagtct ttgcaaataa gccaggtgct tattccatac ctgtttattg
     1561 gcactatgtt tttgttctat taagacatca ttcaccttcc ccaaccacct gcgtgtccat
     1621 gtttcgtttg cccatgttac acaaaacgcg aggtctttat tttcttcaat aaaattttcc
     1681 aacggtgttt caagcatgag tttgccatcg aaccagtaat gataaaaatt aaagccgtag
     1741 atgttataat cttttgccaa actgatctgg gtacttatca cgtcggcatt acgcaggtcg
     1801 taataaccat ttgcaggaat tcttggctgg tagtgatctt taaataaagg ttttgcttct
     1861 ttaacccaat tccagtcagt aaagccttcg ccccaccaat tatcattttc cggtattgca
     1921 tgaaactggg gaaaataaaa aggaacaaac ttaatattca tacaatcttt tcctgaagat
     1981 atttaccagg ggattgaacg ctttcattat gagccctggc agtccgtaat ttttatagat
     2041 gataccaaca atatcttttc tgaaattcgt atcaattttt gcactggatg cgccgtgaat
     2101 gctatacgtt gcaaaaactt tatcgatata ttgaaacttg aattttttgt cagaccataa
     2161 tttcaaattc agcacataat cagcaagtaa ctcgtacttc aattcataac tatgatcttt
     2221 aaacacctgc cttggataaa agatcgcctg gtgacaaatg ttcctgttta ttatgctgta
     2281 tttccaaaag cgggtgccgt agatcttacc aggcttttct tttatggcaa cattcccata
     2341 ataaatagtg tcgtgttctt ttagaatcgc ttttacttcg tagggcggca atgtccatat
     2401 gtcatcagct ccaagaaaat aaagaaaatc gcccgtagca actcttatcg ctttgttcat
     2461 tgcgtcgtaa ataccccggt ctttttctga aataattatg ttcggagcct ttatgtattt
     2521 tgatgcagtt ttcacagtat catccgttga gccaccatcc agcatgatta cttcaaagtc
     2581 ttcgctataa ttttcataca gcttgctaag gcacgcctca atgtgcccgt ttgcattgta
     2641 agtgacgatt attatagaga gaagcattac cgggtatttt gacttgattg gttcgccagg
     2701 ttgtctgcgg acaccttgtt taagatcagc caacacggac gcctgctgca cacctaggtt
     2761 tcaatcaaat gcttttgatt gtcgggtttc gctaaaggct taaattttaa aagctctgcg
     2821 agaaaaatcg cggtgacaag gagcggtatg ataaataaaa gaaaatttat aaagtatgac
     2881 tgcgcagtaa aataatccat ttcaaatttg gaaacaaaaa tgagcaaccc aagatagagc
     2941 agcactgtca atttgttttt tctgcagacg taatacagta tatttcttac aaaacttgcc
     3001 acgaacccca gtgtaaacga gaaaactatt gcgcccccga gaccgaggta gagataacca
     3061 atgagcgtgt gtcttgaatt tggcccggta aaatcaagtc cgggcgtata ataatgcaca
     3121 agctgatacc cgatactttc aggcatctgc gaatctttaa tcaggccaaa cattttcaac
     3181 ggacttgaga aaatagaaat gaggccatgg ccatgatcca tttgatcaat aaccccgttg
     3241 ggcaaactca tataatagct gtcgcccgaa gcagctaaac gataagccag cacgtagaaa
     3301 ggattggaac catccgagaa ttgcaccatt atgaccagta aggcgaaaac aatactccac
     3361 aaaatcattt ttctttcaag catccggaat tttataaagg tgaattttgt ttcaagcgta
     3421 tcataaaata taagcaggat aaagatcgat tcaccaatga tcagaaaaaa tcctcttgaa
     3481 gcagacagga tgccatttat tatcacccaa ataatcgcta tccacgtgaa tatcctgaaa
     3541 ccaaaactct tttttgtaaa caagaaataa accgcgcaaa aacttaaaaa aggatacaag
     3601 atcgtcacaa ttctgttctc aaactgcaga atgtcagcgg ctccgtaaat ctcaagttta
     3661 ctaaacatga aaaccggaat gccgttctcc ttgtatatgt agagttgcag tattaaatgg
     3721 atgaaaaaaa cgagtatgaa aaagatcttg aacgccagtt gttcatgctc aagtttatat
     3781 atcgtgctat tctcaaccct tggatttaaa ggtttgcaga ccaggaggcc gactagaaac
     3841 gccagctgcg tggataaaaa taccaggaaa tagaaccagc taattttccc cagcataaac
     3901 aggaaaatcg gtgtcgcgca tgcaaaggcc gaaaatacga ggcttacaag gatcgggtcc
     3961 catatgctga tgaaataacg tttataaaaa acgaaaaaag aaaaaaagga gatcactaat
     4021 gataaaaagt aaagccacaa attaccatat agcaacaaga aaaaatctcc ggaattcatt
     4081 agtccttaca gttatctttt tcgtgaagct gcagttctca caagttgtcc taactggtct
     4141 ctttgtattt cgccgtttct gttgatagcc acgcctaacg taacggaacc ggatcttagg
     4201 caagtagaca tgtatttgga cagatagtta tcagtgaacc tgatccctga agaggtccat
     4261 gatttgccaa caaacgaaga aatgtgccag tatttatttt gcggcacgac agaatctttg
     4321 gacggaaaat attttagatt gtattcttca cctgcactgt aatcaccgat agaagagtcc
     4381 atgtaaggac ttttatcgta cgcgtagttg aaagcgacca aagccttcgg attaccggct
     4441 ttcatggcat cctcaagttg cttaaaaact gcgttattaa aacccttgga aggatcacag
     4501 ccgtcaaccc accaacctgt caccttgtcc ttatagcgaa gacttatttc ctttataacg
     4561 ctggtccatt tttccagata attctggttg atctttaaag taccaccagg cgtaaagccg
     4621 taagtgaatt tatctctcaa aaaagtattg ccgtaaggac catcacccgg gatgtataaa
     4681 aacaacttga tgtttctttt ctggagctct cgtgaaagtt tcgcgataag atcgatatta
     4741 gacgttgctt cacctctttt cagcccggta attttttcga acgcctcgtt aggaatacac
     4801 atgtactgcg tcttttgatg gatcgtaaaa attacataat ccgcttttat ttctgcaagt
     4861 tgatttgcaa atttttgcac attaaagtca tttacacagg aatcccaact ggttttttta
     4921 ccatcattcc attcgggatt ttcgttctgc agttggtata gaaaatggac gatgacacca
     4981 aaccggggct ttgtaaaaaa tgttttgtca gattcattcg gttgagcaga tatatttcta
     5041 tgcgcgcagg atatcatcgt gagcacgatg atcaaaaact taaagctctt catgtcgctt
     5101 gcagtttatg tgtgaggata cgtttgtaaa cagagaaaat atttgcagca tacttatcga
     5161 tggtaaacct ttctttcacc gtcttgatac tttccagtga aagacgatta tacattgagt
     5221 cattttttaa atattctttt agtattcggt aaagctgatc ttctgtttta tataaaaggc
     5281 catttttatc atgtgttaac aactcgctcg tagctgcgcc atcataacct gcaacgggga
     5341 cgccgtagct cattgcttct gcagtcactc tgcccatcgc ttcgtgatgc gcgggctgaa
     5401 taaggcaatc gatatttttg aagatctcgt tgatcgattc tttatgtcct tcaaacctga
     5461 tacggcgagc caggtcgtgg gtatgtatat agtcgttgat ctctgtttca taattctcat
     5521 cggcaaagtc accgtataac ttgagagaaa tatcagaata ttcatttgcg agccgtccga
     5581 acgcttttat tccttccaat tgatttttac ccctggttat aataccaacc atgccaaaaa
     5641 caaatcgctc accttttgtc tttcgaatga tgtcttcttc aaatactacg ccattataaa
     5701 tggtttcgca ctcacacagc aggtgttgac accttttatt acgaatcgca gaactgatcg
     5761 ctattgcaca agcggcccgg ttcagttgct tcctgaaagc taattcaccc aggctatatt
     5821 tatagtgata atcttcatat acaaattcgc gaatatgcca tacatgcggt tttttaagtt
     5881 tcgcggcaag ctgcgaaccg aagctgaaaa cagacgaatt actgtgcaca atatcaggat
     5941 tgaaccgccg caaagctgcg ctatgtttca acagcaataa acgattaatt aaaagtttcg
     6001 ctaatccttt aaaaaaagct ttcgtcttcg atgatgcttc aatcgtaacc gaactatgaa
     6061 atggaattac ccggtagtcg acctttaagc attttagttt atttgtcatc ttgccttcga
     6121 aaggcaagat gaccataggg tcaaaagcgg gatgcaattt tcttattcct gtaatgagat
     6181 cgatcagcga cctgtttgct ccgtataatt ctgcgtaatg ggtaacaaaa acgattcgca
     6241 aagacttggt ttttgatgtt cgcttgcaac cgacaatttt atcagtggcc agcctgcgcg
     6301 tctaaatatt ctatcctggg tttaaaaaag aaggaagcga aaaaagcacg cagataaatc
     6361 ctgaaccgca taaatccgta cgtttttaat agggacacaa acatatttct tgcatgtgcg
     6421 agaagatcta taaaatagat cgtttttcta ttatcccttt tactcaggta taatccattg
     6481 cgtatattat aataatgcag tttaagacgt tttttatcca tttcgttaag gatactgggt
     6541 atcgatggat ttatccgcag atgttttacg atgcttttac caaccatata gccaggcgcc
     6601 tgtttataaa gccgtgcagt aaaatcaata tcgtcggccc agaaaaaaaa atctttagaa
     6661 ggcaaccctg ctgcttttaa gtgcgctgaa ttgatgaaca gcgaaatgta tgtagcattc
     6721 ttaacacgtg taattccatt ttccgcgtat tgaccccaaa ccgggtaatc atattttgag
     6781 agactcgtat caaccgaggg aacgttcatg aaacttccat cagcactgat caccttactg
     6841 cacaaaaaag aaaaatccgg aactatttgc gccgcgttga tcagttcttc cagtgcgtta
     6901 tcgaaagcta ttccgtcatc gtccatgagc catatataat caaagccttt gcagtaagca
     6961 tgttttattc ctgcataata tgcgccggcg ctgccgtcat tatttttatt tatggcagta
     7021 acgtgttttt gtgtagttag ccattccgaa gttccgtcgg tgctgccatt atttataacg
     7081 atcagagcgt ctgctttacc gtttggtttg taatggcatc gacgctttgc tgcaatagcg
     7141 ataatcggtt gtgggtaacc aagactgcgg ccactttcat ggtttgcgat gtctgcatta
     7201 aacgaggtga gattttcttc ttaggaaaac cagttttttt aattcgggca gcgaattaaa
     7261 aactattgtt agtatccaca cgatcagtgc agcggccagc aaatcgtttc ggtgataata
     7321 aatagagatc catattaaaa cagacaagat aacctggggc agtaatagcc tggtgatctt
     7381 tttaaacttc agtttgtggt gtaccacata aatcaggtta aagggcaacg ccaatgctat
     7441 ataagctaaa gcgtaaaatg ctgcaacggc cgttaatgaa ataaacaacc cgtaaacaat
     7501 accgccgacc atgcaaacgg caccaatcca tcccgaatac ataagcgctt tttcgtgctt
     7561 ttcaattaat agaattgtgc ctaatgttga aaataatgtc tgtgaaagta tcaacactcc
     7621 aaagtacggt aacagttggg cgaccatcat ccattgatca ccccaaagta tatgcacaaa
     7681 ttgtttaggt aataatagaa gtagtacggc gagtggaaaa ttaataaacg atattaattt
     7741 caaaacaaat gcatattcgt tctcaacatc gccgccgcgc tctttatacc gcaccaggct
     7801 tggatacaat accgttgtaa atatgccggt gatcaatgcg aggggaagag taagcatctg
     7861 gtaggcgcgg ctataaattc ccagatccgc tgtgccgtaa tatttaccta cgagaagatt
     7921 gtcggcattt cgtgcccaat aattaacggt gttaaaacca atcagtttgc ctattaccga
     7981 tcgtgttagt agaaaagatt ttacaattat ttttttccgc cgggtataaa gagagtaacc
     8041 cgacgtgtta tacaacagca gccatgttac aatggtgatc acgtattgtg accatatcag
     8101 tgaccaatat ttgaatccgg ccaatgctaa aagtatggaa cat
//
LOCUS       DASQJI010000500         3553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_673739,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000500 DASQJI010000000
VERSION     DASQJI010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673739"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..571
                     /locus_tag="VEV83_13685"
     CDS             131..571
                     /locus_tag="VEV83_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46224.1"
                     /translation="MRKCFLLWCIFLLIASGAGIAAYEPLMSVIRDKPVEKTVLFSLN
                     KGSNYSSKVYRGSSAEIYIAVEKVGSTTRTIVWDTTLDARLLSKYPSATKAMSKKITV
                     PNVIEKKEHVETNYILTYNSNGSILKMQSSSFTFGTSDTLAIVL"
     gene            complement(674..2212)
                     /locus_tag="VEV83_13690"
     CDS             complement(674..2212)
                     /locus_tag="VEV83_13690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46225.1"
                     /translation="MRFLFVSLLFISICTSAQTELIYRNLPVGKYAVGFKIFTLTDAA
                     RISKPEFNYLGEKIEGDRRRKITIHLWYPAQASVNGSRLTYGDYCYSNLLTSTNETIS
                     DDQKDAEMNRARRSVENWWGKTTDEAWLNLMTTKMLSQSEVPAIEEKFPLLVGMLRPL
                     STTITNELLASNGYIVAMIKGENRSTFAEAALDDIADMRFAIVELQKHTNVDGERIGT
                     FGFSGSGFSQVLFAMNDYRIKAVADIESGIYMDGLYQSFSASDYYQPGKMRAPFLHIF
                     STDLSKQERFIDEFYNKTKFTQRYRLIVNQPALHHWDFATEGYTSCAVLNMRGAQQEN
                     IQRAFKIASLYLINFFNAELKNEDDAGKFLSNKPVIENVQDSLWTFSEFPPFKAAPDR
                     EAFEYIIRTKGIDEAISVVRNTIKEDTTTDIMKWFILNSLGYNFMGEQKYKEAVGVFK
                     LNTELHPDDPNLFDSLAEGYEQSGDKENMKKASAIVMEILNKKPTLTDAEKGLKSNAE
                     RRLK"
     gene            2422..2895
                     /locus_tag="VEV83_13695"
     CDS             2422..2895
                     /locus_tag="VEV83_13695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46226.1"
                     /translation="MKSLNQIVASLFVWLFLLACSKSGSGPAPNPPPDNQLAGTWHVD
                     YYVAANITVGLPDDTLYARHNEAWIFTEDSLFADAWFIALYDLTTDPPTFSIADTSET
                     KTASSYTRNGNKIISRSAIRQETFDIITLTDHQLVLHETLDPLAGFTDDYISMSK"
     gene            2955..>3553
                     /gene="tpx"
                     /locus_tag="VEV83_13700"
     CDS             2955..>3553
                     /gene="tpx"
                     /locus_tag="VEV83_13700"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HYK46227.1"
                     /translation="MTTKIQRSLIGFLFTGGVVITASCFAQTNSSNNLSTTSNMENTN
                     GATITLGGKPVHTISKLPAVGTEAEDFTLTAVDLTEKTMADFKGKYIIMNIFPSVNTG
                     VCSKSVRTFNQDAANLNNTTVLCISKDLPFAQKQFCGAEGIDRVVMLSDFRNDFGTRY
                     GVQMVDGAFKGLLSRAVIVINPEGKIIYEQQVPDIGQEP"
BASE COUNT          974 a          806 c          750 g         1023 t
ORIGIN      
        1 tgtgtaaaaa atacacaata attggccgga ttgaccaaat tagtggcgtt tcaatgggga
       61 aatacttcat ttcacagagg gaagctctct tgcacggtta ttgaacaatc acggagaata
      121 aaaacaattt atgaggaaat gttttttgtt gtggtgcatt tttctattga ttgcttcagg
      181 tgcgggcatc gcagcttatg aaccgctaat gagcgttatt agagataaac ctgttgagaa
      241 aacagtttta ttttcgttga ataagggcag taattactcc tctaaagtat atagaggttc
      301 ttctgcagaa atatacatag cagttgaaaa agtaggaagt acaacccgaa cgatagtatg
      361 ggatacaaca cttgatgcca ggttgctgag taaatatcca tcagctacaa aagcgatgtc
      421 aaaaaagata actgtgccga atgtaattga aaagaaagaa cacgttgaga ccaattatat
      481 cttaacgtac aactcaaatg gcagcattct taaaatgcaa agcagcagtt tcacttttgg
      541 tacttcggat acattggcta tcgtgcttta ataatcacgc attagcaatg catcatctct
      601 ggctggtttt ggcgtcctcg ccaacggtta gaaccggaac aagcgcatgc ggcggaaaca
      661 aatatatttt acactatttt aatcgtcttt cagcattact ctttaaccct ttttctgcat
      721 cggtcaatgt tggcttttta ttcaggatct ccattacaat cgccgatgcc ttcttcatat
      781 tctctttatc tcctgactgc tcgtagccct ccgcaaggct gtcaaacaaa ttggggtcat
      841 cgggatgcag ctcggtattt aatttaaaaa cgccgacagc ctctttatat ttttgttcac
      901 ccataaagtt gtagccaagc gaattcaaaa taaaccactt cataatatcg gtggtggtat
      961 cttctttaat cgtgtttcga acaacgctaa ttgcctcatc aatgcctttc gtcctgatga
     1021 tatattcaaa tgcctcccgg tcgggcgcag ctttgaacgg cgggaactct gagaaagtcc
     1081 ataaggaatc ttgcacattt tcgatgacgg gtttgtttga caaaaacttt ccggcatcgt
     1141 cctcgttttt taattcagca ttaaaaaaat tgattaggta caaggacgct attttaaatg
     1201 cccgctgaat attttcttgt tgcgcgcccc gcatgtttaa aaccgcacat gaagtgtatc
     1261 cttctgtcgc aaaatcccaa tggtgcaaag caggctgatt tactataagg cgataccgct
     1321 gcgtaaattt tgtcttgtta taaaattcgt cgatgaatct ttcctgtttt gacaggtcgg
     1381 tgctgaagat gtgaaggaac ggtgcacgca tcttaccagg ctggtaatag tccgacgctg
     1441 aaaaagactg gtacaacccg tccatgtata tgccgctttc aatatcagcg actgctttta
     1501 tcctgtaatc gttcattgca aaaagcacct ggctaaatcc tgagccgcta aaaccgaacg
     1561 tgcctatcct ttcgccgtca acatttgtgt gtttttgcag ttccacgatc gcaaaacgca
     1621 tgtcggcgat atcgtctaat gctgcctcag caaacgtgga ccggttctct ccctttatca
     1681 tcgcgacaat gtaaccgttg cttgccagta attcgtttgt gatggtggtg gacaatggac
     1741 gaagcatccc aaccagcagc ggaaattttt cttctattgc gggcacctcg gattgcgaga
     1801 gcatctttgt ggtcatcaag ttcagccatg cctcgtcggt cgtttttccc caccaatttt
     1861 cgaccgacct tctcgcccgg ttcatttcag cgtctttttg atcgtcgctg atcgtttcat
     1921 tcgttgacgt gagtaaattg ctgtaacaat aatctccgta ggtgaggcgt gatccattca
     1981 cacttgcttg cgccgggtac cataagtgga tcgttatttt tcttcttctg tccccttcga
     2041 tcttttcgcc caggtaattg aattcaggtt ttgatattcg tgccgcatct gttaatgtaa
     2101 atattttgaa gccgactgca tattttccaa ccggtaagtt gcgatagatg agctcggttt
     2161 gagccgatgt gcagatgctg ataaagagca gggagacaaa taggaaacgc atacgcttgt
     2221 tttcgttaaa aatattcgcc ccaacgcttg tctcctacca atccgacagt tctggaagtt
     2281 aaacaccgac aaaaatcatc ggtctcgata caattgttga gtggatcttt tgaattggct
     2341 tgcacttgca ctcatgtgct tagccgctcg taacaaaaca atcattatct tccatcattc
     2401 atcatccgaa atcaaaactg catgaaatcg ctaaaccaaa ttgttgcatc attgtttgtt
     2461 tggttattct tgctggcttg ttcaaagtcc ggatccggtc cagctccaaa tcctccgccc
     2521 gacaaccaac tagcgggcac gtggcacgtt gattattatg ttgccgccaa catcacggtt
     2581 ggtctacccg acgatacgct ttatgcacga cacaacgaag cgtggatatt caccgaggat
     2641 agtttatttg cggatgcatg gtttattgcg ctctatgatc ttacaacaga tcctccaaca
     2701 ttcagcattg ctgacaccag cgaaacaaaa accgcgtcga gctatacgcg gaacgggaac
     2761 aagattatat ccagatcggc gattcgccag gagacgtttg atattattac gttgaccgat
     2821 caccaacttg tgcttcatga aacgctggac ccgctggcag gattcaccga cgactatata
     2881 agtatgagca aatagtgctg tgctcattct ctccttcctt tcgtaaattc gcagcgctta
     2941 atttattccc tcaaatgacc actaaaattc aacgttcgtt gatcggcttc ttgttcaccg
     3001 gcggcgtcgt catcacagca agctgttttg cacaaacaaa ctcatcaaat aatttgtcaa
     3061 caacatcaaa catggaaaat acaaacggcg ctaccatcac cctcggaggc aagcctgttc
     3121 atacgatatc caaattaccg gctgtgggta cagaagcgga ggacttcacc ttgactgcag
     3181 tcgaccttac tgaaaaaacg atggcagatt ttaaagggaa gtatattatc atgaatatat
     3241 ttccgagcgt aaacacagga gtatgttcta agtcggtaag aacattcaac caggatgcag
     3301 ccaaccttaa caatacaacg gtgctttgta tttccaaaga cctgccgttt gcacaaaagc
     3361 aattttgcgg agcggaaggc atcgatcgcg tggtgatgct ttcagacttc agaaatgatt
     3421 ttggaacgcg gtatggagtg cagatggttg acggagcgtt caaaggctta ttaagccgcg
     3481 ccgtgatcgt gatcaaccct gaaggcaaaa taatatacga acaacaggtg cccgacatcg
     3541 gccaggagcc gga
//
LOCUS       DASQJI010000501         2706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1749420,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000501 DASQJI010000000
VERSION     DASQJI010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749420"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VEV83_13705"
     CDS             complement(<1..270)
                     /locus_tag="VEV83_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK46228.1"
                     /translation="MDNFEIVIFIMTILIVLSIFTDKIKLPYPILLVAVGLVIGFVPF
                     LPNLALDPDIVFLIFLPPLLYDAAFKTSWLDFKKEIGTISTLAVTL"
     gene            complement(350..1057)
                     /locus_tag="VEV83_13710"
     CDS             complement(350..1057)
                     /locus_tag="VEV83_13710"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46229.1"
                     /translation="MRPHRFLLTVITSLILLACSPQNNNDVINKILQAEQALKQHSQD
                     HQSWQQLYVLMNENYTKLTAAERTRLRKVLEQYGIWSAGTLYTANEPGTKIIIKGHVV
                     NSKGQPLANASLHIFQTDSHGYYTPLDSAQNKMGEPDARLFSFLKTDANGNFEIHTIR
                     PASYPKQYNGRTIPQHIHNNITAKGYADKNLQMVFDDDPAMNDYWRQWATANGFPVLK
                     LNNATPQRTATVEITLR"
     gene            complement(1655..1729)
                     /locus_tag="VEV83_13715"
     tRNA            complement(1655..1729)
                     /locus_tag="VEV83_13715"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1692..1694),aa:Val,seq:gac)
     gene            complement(1961..>2706)
                     /locus_tag="VEV83_13720"
     CDS             complement(1961..>2706)
                     /locus_tag="VEV83_13720"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK46230.1"
                     /translation="FAYFKYIPEEVAARLPPRSFSHTCDTTDMKQMEGKEILIIGGRQ
                     SAYEWAALLNEAGAASVHISHRHPSPAFETPDWSWANAMVDRYENEPTWFRDLALPAK
                     EDIRKKLWAEGRLKLEPWLKERIKKENIRIWPCTQIVSGRQLQNRKLEVLLDNGETIT
                     IDHIIFATGYSVNMHNVPFLSNGNILPLLSIQNNCPVLDEHLQTSLPGLFITSMPATH
                     DFGPFFAFTIAVRASAKLIASGLTQGNRK"
BASE COUNT          727 a          555 c          614 g          810 t
ORIGIN      
        1 aagggtgacg gcaagggttg atatggtacc gatctccttt ttgaaatcca gccacgaggt
       61 tttaaacgct gcatcataaa gaagcggtgg taaaaaaata agaaatacaa tatcagggtc
      121 aagtgcaagg tttggaagaa atggaacaaa accaataacc aggcccacag ctaccaggag
      181 tataggatag ggcaatttga tcttgtcggt aaaaatggag agcacaataa gaatggtcat
      241 tataaaaatg actatctcaa aattgtccat ccgcaaagat aaatgagcag aagtttaatg
      301 cccatgtgct gcgcggcgtt gtaggtgagc gagcaacaag gcagccttat tacctcaatg
      361 taatttcaac cgttgctgtt ctttgcggag ttgcattatt tagcttaagg acgggaaatc
      421 catttgctgt cgcccattgc cgccaataat cattcatagc aggatcatca tcgaaaacca
      481 tctgcaggtt cttgtctgcg taaccctttg cagttatgtt attatgtatg tgttgaggta
      541 tcgttctgcc attatattgt ttcggataac tggccggacg tatggtatgt atctcaaagt
      601 ttccgttagc gtcggtttta agaaagctaa acaatcttgc gtcaggctct cccattttat
      661 tctgtgcgga atcaagcggc gtgtaataac cgtgactatc cgtttggaaa atatgcaaag
      721 atgcatttgc taacggctgt ccctttgagt tgacaacatg ccctttgata ataatttttg
      781 ttcccggttc attcgccgta tacagtgtgc ctgctgacca tatgccatat tgttccaaca
      841 cttttctgag tctcgttctt tcagccgcag taagctttgt ataattttca ttcatcagta
      901 catacaattg ctgccatgat tggtgatcct gtgaatgctg tttcagtgcc tgctcggcct
      961 gtaaaatttt attgatcaca tcgttattgt tttgcgggct gcaggccagc aggattaatg
     1021 acgtgatcac tgtcagaaga aaacgatgcg gtctcatttt tttgttatct cgtaagttac
     1081 aaagtttcca ggccggttgc agtcagaaaa ggacgttcgg catttcgttt ctgtgcagaa
     1141 gcattcgcca tgcgctctgt gcaaatattc tcgcactgag caaacggaac aaacaaagag
     1201 ttgcatgtga aataaggaat gagcaagtag ccgttcgttc ggcattcacc ttttgtattt
     1261 tctgatttgg tggttcttat tttttatatt ctgcagaact gagaaagagg gaatcaaatc
     1321 ggactctcag ctaaatcgtg taaaaaattt acgtgcctgc aaactttctc attccttaat
     1381 ttatggtttc ttatttgtta ttcttttggg cttcctactt ctctttcttt tcctcactga
     1441 ctttcttaag caagaagttt gcatggtgag taactaaaag gttgaacgca aacgtactta
     1501 gacgccttga aacaagggat gacgaggatc aggggaatga ggatttaggg attagattta
     1561 gaaccgggct ttgcgtgtcc ttgaaagttc aatcttctcg ttttagtaaa cagcaatcgt
     1621 aaatctgaaa tctgcaatcg taaatctctt tgggtgggct gtgccgggct cgaaccagcg
     1681 acccccacgt tgtcgacgtg atgctctaaa ccaactgagc taacagccct gaacggaatg
     1741 caaaataaat aagaaataag gaacgagaaa tgagaaataa gaaagtatgt tgatgaagga
     1801 agtacgtcct gatatttttt tgttttgtga gcggcaggaa atgatgaaga ttgcagattt
     1861 cagatttgcg actgtagatt taggatttag gatttacttc agagatcaga catcagagat
     1921 cagaaatcag aggtcttcct cattccatat tttgcgtttc tcatttccta ttcccctggg
     1981 tcaaaccgct ggcgatcaac tttgccgatg cacgtactgc gatcgtgaat gcgaagaatg
     2041 gtccaaaatc atgcgtggca ggcatgctcg tgataaataa ccccgggaga cttgtttgca
     2101 aatgttcatc aagcaccggg caattatttt gtatggagag cagcggtaat atattcccgt
     2161 ttgagagaaa gggaacattg tgcatgttaa cgctgtagcc tgttgcaaaa atgatatgat
     2221 cgatagtgat cgtttccccg ttatccaaca aaacttccag cttacggttt tgtaattgac
     2281 gcccggaaac tatctgtgtg catggccaga tccgtatatt ctcttttttt attcgttctt
     2341 taagccacgg ttctagcttt aaacgtcctt cggcccaaag ctttttgcga atatcttctt
     2401 tcgctggcag agcaagatcg cgaaaccacg ttggctcatt ttcgtacctg tcaaccatgg
     2461 catttgccca ggaccaatcc ggggtttcaa acgcaggtga cgggtgcctg tgtgatatat
     2521 ggacactggc agcgccggct tcattcagca atgctgccca ctcgtacgca ctctgacggc
     2581 cgccgatgat caaaatttct ttgccttcca tctgcttcat atccgtggtg tcacacgtat
     2641 gtgagaagga acgaggtggt aaacgcgcgg ctacttcctc gggaatgtat ttgaaatatg
     2701 caaacc
//
LOCUS       DASQJI010000502         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1443378,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000502 DASQJI010000000
VERSION     DASQJI010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443378"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..>2090)
                     /locus_tag="VEV83_13725"
     CDS             complement(103..>2090)
                     /locus_tag="VEV83_13725"
                     /inference="COORDINATES: protein motif:HMM:NF039201.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46231.1"
                     /translation="KGNLQTTNLNLTKNGGTGVSVWSLFATATKLYAGGDFDQAGSDL
                     RSDFVEADISSGSGNVQATDASPDDIVYAINVQGNNIVYGGNFGFSNLAKRNYLGLVK
                     MSTGKILPFAPSPDSYVFDMAVNYNRIFIVGQFDNVNGTPHTGAAAFNKSTGALLTWN
                     PQLARSGQSYYADLYSIAADSNTVYLGGAFDRVAGTVRNNAAAVAATNASLLAWDPEA
                     NNAGINGWVRAIAMNGANLLIGGDFNFCKGAPRRYAAKIDSATGLVNTSWDPSPNGYI
                     YAINSSGTNIYLGGNYSQLAGVTRTSLGSVSASNGAVTNFDPVIQGTVNALAFDASGI
                     LYVGGSFSNAKATARNNVAAFATSGSGTLQAWDPNAGSTVWALAAIGTKIFIGGSFTT
                     LNGGAASRHYFGSVNNTNGTATTFDPYMNGAVLCLSNSGNNLYVGGQFSTVANGGSSR
                     FYQALYDASTGALKTWNPAANSYVYGIAVQTDTVYSTGYYTTLNGNPRGYAGAVRGSA
                     GTATLSVNPNMGNIGRSTWVSEHMWLIGGQFQTAGGDVRTGFAVYDLPGNAPLQSGNT
                     ATEEYVRTANSLQNQFALYPNPAHGIVTVKLNNAVSGKLNITVTDMNGKKVLQQSAEG
                     NYLNYIKVNTSALKNGTYVITLTGEDINFNSIVVIAN"
BASE COUNT          534 a          540 c          446 g          570 t
ORIGIN      
        1 attgcatcac cactttctca ttccttattc cacatttctt atttcttatt aacaaagatg
       61 ccggctacta accggcatct tcgttgcagt tgaatttgta tcttaattcg cgatcacaac
      121 aatgctattg aaattaatat cttcccctgt aagggtaata acatacgttc cattcttgag
      181 tgcacttgta ttaaccttga tatagttcag ataatttcct tccgcggatt gttgcaaaac
      241 ttttttgccg ttcatatcgg tgacagtgat gtttaatttt ccactcactg cattgttcag
      301 tttcaccgta acaatgccgt gtgcagggtt cggatacagc gcaaactggt tctgcaaaga
      361 gtttgctgtg cgcacatatt cttctgtggc tgtattgcca gattgcagag gcgcattacc
      421 tggcaaatcg tatactgcaa aaccagttcg gacatcgcca ccagcagttt gaaactggcc
      481 accaattagc cacatatgct cagacaccca ggtgctcctg cctatatttc ccatgtttgg
      541 gttaactgaa agggttgcgg ttccagccga gccccgaaca gccccggcgt aaccacgcgg
      601 attcccattt aacgttgtat aatagcctgt agaatagacc gtatctgttt gcaccgcaat
      661 gccgtataca taactgttgg ctgcaggatt ccatgtcttt agagcaccgg ttgatgcatc
      721 gtacaaggct tggtaaaaac gcgatgagcc tccgttcgca accgtgctaa actgtccacc
      781 gacatacaag ttattgcccg aatttgagag gcaaagtacc gcgccgttca tatacgggtc
      841 aaaagttgtt gcagtgccat ttgtattatt cactgaaccg aaataatgcc gggaagcagc
      901 accaccattc aaggttgtga aagacccgcc aatgaaaatt tttgtaccta tcgcggccag
      961 cgcccacaca gtgctacctg cattaggatc ccatgcctgt aacgtaccgg agcccgacgt
     1021 tgcaaatgca gcaacattat ttcgtgcagt tgcttttgca ttgctgaaac ttcctccgac
     1081 atacaggatt ccggatgcat caaacgcgag ggcgttcact gttccctgta taaccggatc
     1141 gaaattggtt accgctccgt tactcgcgct aactgatccg aggctcgttc tcgttacccc
     1201 agcgagctga gaatagtttc cgccgagata gatattcgtg ccggaactgt taatcgcata
     1261 gatgtagcca ttcggtgacg gatcccaact tgtgttcacc aatccagtgg cagaatcaat
     1321 tttagctgcg taacgccggg gcgctccttt gcagaaattg aagtcgccgc caatcaacag
     1381 attcgctcca ttcatggcta tcgcacgcac ccagccatta atccctgcat tgttcgcctc
     1441 cggatcccag gcaagcaagg atgcatttgt ggccgccaca gccgctgcat tgtttcgtac
     1501 agtgcctgca accctatcaa acgcaccgcc gaggtaaaca gtattcgagt ctgccgcaat
     1561 cgaatataaa tctgcataat aactctgacc agatcttgct aactgaggat tccatgtgag
     1621 cagagcaccc gtgcttttgt tgaaagccgc agctccggta tgcggagtgc cgtttacatt
     1681 atcgaattgt ccaacaataa aaatccggtt gtaattcacc gccatgtcga aaacgtatga
     1741 atcgggagac ggcgcgaaag gcaatatctt tcctgttgac attttaacca ggccgaggta
     1801 attgcgtttt gccaaattgc taaagccgaa atttcctccg taaacaatat tatttccctg
     1861 cacatttata gcatacacaa tgtcatcagg ggatgcgtcc gtagcttgaa catttccgga
     1921 tccggatgat atgtcggctt caacaaaatc acttcgaaga tcagatcctg cctggtcaaa
     1981 atcaccacct gcatacagct tggtcgctgt agcgaataaa ctccaaaccg aaacacccgt
     2041 gcctccgttc ttagtaaggt taaggtttgt agtttgcagg tttcccttca
//
LOCUS       DASQJI010000503         7308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_368022,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000503 DASQJI010000000
VERSION     DASQJI010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7308
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368022"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VEV83_13730"
     CDS             <1..864
                     /locus_tag="VEV83_13730"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HYK46232.1"
                     /translation="VPGHEIVGRVEAIGDHVTKFKEGDLVGIGCMVDSCRECDSCKQG
                     LEQYCHNMPTFTYSMPERHGDGITYGGYSNKITCDEDFVLKVSDRLPLEKVAPLLCAG
                     ITTYSPLRYWKVGAGDKVGVIGLGGLGHMAIKFANAFGAEVTVFSTSPHKEADAISLG
                     AHKFVVIHDSEKMKIANYFNFILDTVSAAHDYNAFLGMLTTNGTMACVGLPPFPVQLP
                     VFSLVFQRRSLAGSAIGGIAETQEMLDYCAEKNITSDVEVINIADINTAYKRMESGDV
                     KYRFVIDMATV"
     gene            complement(1093..2220)
                     /locus_tag="VEV83_13735"
     CDS             complement(1093..2220)
                     /locus_tag="VEV83_13735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46233.1"
                     /translation="MKKLIVLVSALACGLSLYAQDSSMNNNNTQNNTNTQSNPNTNMQ
                     TSPNTQNNTDIQSNPNTQNNTNTQSSPNTNMQTSPSTQNNTDMQSNPNGQSNTNMQSN
                     PTQSNSDMQNNSNMQNNSNMQNNSNMQNSTGMQSNTNMDNGTVPADIQTSFQSTYPNA
                     ANVKWETVTLPVFSQYWRSENGPVKWYPPMQGYRATYIANNRIMHVYYTDRGKSYVAA
                     GPVLNSWVPEDVVTKVINQYNGVYDITVMKAVVKDSTMNNSAAMDNSTTTNNSTTTNN
                     STSMNNSTTTNNSTTANNSTSMNNSTTNNSAAMNNSAAMNNSTGMNNSTGMNNPPAVN
                     VPIKEDVFQVRYAETPGGPLQTAYIKADGSPATASDVFALK"
     gene            complement(2649..3482)
                     /locus_tag="VEV83_13740"
     CDS             complement(2649..3482)
                     /locus_tag="VEV83_13740"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="retropepsin-like aspartic protease"
                     /protein_id="HYK46234.1"
                     /translation="MKTILVFLLTLRCTITSAQTVIPLEITDGGYIFLRMLVNGNDTA
                     RFMLDTGSGITVVSQNLFARYHLQEAGLHTGTRHNGESITGMLYILPSLSAGTFTRQN
                     VVIGVYDALPGCDGLLSMNYFRDTPFTIDFKHKSLIIETTSSIARISKNATRVPIKLK
                     LNGKDQLDFFVHVCINDSIPADAEFDTGSGFNMLMLHTKYLEPLHIDLAGIPKQNYGY
                     YVYSTTLPSLSYCDALALRQQNVFVGFKEGLIYEALIGSGMFRDRLLTIDIPNSEMLV
                     H"
     gene            3607..4863
                     /locus_tag="VEV83_13745"
     CDS             3607..4863
                     /locus_tag="VEV83_13745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46235.1"
                     /translation="MEVRLGLKENWQQFTLLVIINAFVGGMVGLERSILPRIAETEFH
                     IAANTAILSFIVVFGFVKACTNYFTGALANKVGRKNLLTIGWLIGIPVPFVLMYANSW
                     DWIVAANVLLGINQGLTWSSTVVMKIDLVGEKQRGLAMGLNEFAGYVAVAIVAFLTGW
                     IASNYGLRPYPFYTGVVLSMIGLLLSWLFVKDTKHHITAETTTSKVPKLRNVFWDTTL
                     NNKNLSSVTQAGLVNNLNDGMAWGIFPIFLAAKGFDIAQIAIVTAVYPAVWGLGQLLT
                     GKMADHFCKKDLLFIGMLLQGIALIIFLFAETITHFIILSALLGIGTALVYPTFLATV
                     AENTHPTDRAKSLGIFRFWRDLGYAIGAILTGIIADTLGINASIMVIGSLTMFSAAII
                     FYRMQCGDDDPRKFSKWLYFQKKAVS"
     gene            5090..6418
                     /locus_tag="VEV83_13750"
     CDS             5090..6418
                     /locus_tag="VEV83_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HYK46236.1"
                     /translation="MNRSISTPVKISSVTKREIFISTLIIGLLFFIFGFISWVNSILI
                     PYFKIACELNNFQSYFVTFAFYISYFIMSVPAAYILKNSGFKKGMMLGFFSMSLGALI
                     FIPAALTRTYEIFLVGLFIIGAGLAILQTAANPYITILGPKERAAQRISIMGICNKGA
                     GILAPLIFAAVVLRATDTQLFKELATMNEVAKDAALDQLIRRVIAPYTIVGMVLFGLG
                     LLVRYSPLPELNTEHESAEVAATNVHKKNIFQFPHLVLGAIAIFLHVGTQVIAIDTII
                     GYAGSMHISLLEAKVFPSYTLTATICGYIVGIICIPKFISQLYALRICTLLGTLLTLL
                     IIFAKGNVDLLGHHVDISIWFVVLLGLANSLVWAGIWPLALNGLGRFTKLGASVMIMG
                     LCGNAIIPLIYGRLADVYDVRSAYWVLFPCYLYLIFYAFRGYKVSRWSGP"
BASE COUNT         1911 a         1573 c         1664 g         2160 t
ORIGIN      
        1 gtgccgggtc atgagatcgt gggaagagtc gaagccatag gtgaccatgt aacaaaattt
       61 aaagaaggcg atcttgttgg catcggctgt atggtggatt cctgcaggga atgtgattca
      121 tgcaaacagg ggcttgaaca atactgccac aacatgccca cttttactta tagtatgccg
      181 gaacggcatg gtgacgggat cacatacgga ggctattcaa ataagataac gtgcgacgaa
      241 gactttgtgc ttaaagtttc ggatcgattg ccgttggaaa aagttgcgcc gcttctttgt
      301 gccgggatta ctacttattc tcctctacgt tactggaagg tgggtgcggg cgacaaggtg
      361 ggcgttatcg ggctcggcgg gcttggtcat atggcgataa aatttgcaaa tgcatttgga
      421 gcggaagtca ccgtgttcag cacttcgccg cacaaagaag ccgacgcgat cagcctaggc
      481 gcacacaagt tcgttgtcat acatgattcg gaaaaaatga agatcgcgaa ttacttcaat
      541 tttattcttg ataccgtttc tgcggcacac gactataacg cgtttctggg catgttgacg
      601 acgaatggaa cgatggcttg tgttgggttg ccaccgttcc ccgtgcagct gcccgttttc
      661 agtttagtat tccagcgcag aagtctggca ggctctgcca tcggtggcat cgccgagaca
      721 caggaaatgc tggactattg tgcagaaaag aatattacct ccgacgtgga agtcatcaat
      781 attgcagaca tcaatacagc ctataagcga atggaaagcg gggatgtaaa atacaggttc
      841 gttatcgaca tggcaacagt ctgatctgtt cttgacaaat cgcgagaatc atttgaaaat
      901 tgaggattga agtgaggtat cagcaccggc ttatggctca caaaacaggc cgaggcaaat
      961 tgccgccgat cactttcctc attcccattg gaattgagca aaggctttcc gttgactgag
     1021 acgacaaaac aggcgcggtc aatggccgcg cctttcgaat attaagatct taattatctg
     1081 ctaaatccgc tgttatttta gtgcaaacac atcagaggca gtagctggag atccatcggc
     1141 cttgatatat gcggtctgaa gaggtcctcc gggtgtttcc gcataccgta cctggaacac
     1201 atcctccttt atggggacgt tcaccgctgg cggattgttc atccctgtcg aattgttcat
     1261 ccctgtcgaa ttgttcatcg ctgccgaatt gttcatagct gcggaattgt tcgttgtgga
     1321 attgttcatc gatgtggaat tgttcgccgt tgtggaattg ttcgtcgttg tggaattgtt
     1381 catcgatgtc gagttgtttg tcgttgtgga attgtttgtc gttgtggaat tgtccatcgc
     1441 tgcggaattg ttcattgtag aatctttcac caccgctttc ataactgtta tgtcatacac
     1501 gccattgtat tgattgataa ctttagtgac cacatcttca ggcacccagc tattgagcac
     1561 aggacctgcc gcaacataac ttttgcccct atcggtgtaa tacacatgca ttatcctgtt
     1621 attagcaata tatgtggcac gataaccctg cattggcgga taccatttta ccggtccatt
     1681 ttctgacctc caatattgac taaacactgg taacgttact gtttcccatt tcacgtttgc
     1741 agcattggga taagtgcttt gaaagctcgt ctggatgtcg gcaggaactg tcccgttatc
     1801 catgttcgta ttgctttgca tcccggtgct attctgcatg ttggaattat tctgcatgtt
     1861 tgaattgttc tgcatgttcg aattgttttg catgtcagaa ttgctttgtg tgggattgct
     1921 ctgcatgttc gtattgctct gaccattcgg attactttgc atatccgtgt tgttctgcgt
     1981 gcttggacta gtctgcatgt tcgtgttcgg actgctctgc gtgtttgtat tattttgggt
     2041 gttgggattg ctttggatat ccgtgttgtt ctgcgtgttc ggactagttt gcatgttcgt
     2101 gttgggattg ctctgcgtgt ttgtgttgtt ttgcgtgttg ttattattca tgctgctgtc
     2161 ctgcgcatac aatgaaagcc cgcacgccaa agcagaaact aagacgatta actttttcat
     2221 actcttatta tttaaggttt aagacacgat tgtcaagtgt tcataaacaa atttgatacc
     2281 ctatttatcg caagacccta caaatgatat aagaaaattt actgctgctc gtataggtcg
     2341 gaattaacat aggtatatct actctataag atgttaatat gcaatgagaa atgccctcat
     2401 tccgaaaaat tcgcagggtg ttgcatgttt ttttcgtcga acctcctgcc gtcgaggaaa
     2461 aaaaagaaac gggcaggtta ggtaagcagc aacagggccg ctcgcgtgat cagattgcaa
     2521 acaaatcgtt caatattcaa cgaaacaatt ttacattctc aaaaattcgt ttgaacgcaa
     2581 cgacacaatg aaggacaacc gccacgacgg gttagaactc gcccactacc ataagggtct
     2641 ttatttgcct aatgcaccag catttcggaa ttcggaatat caattgtcaa cagccgatca
     2701 cgaaacatgc cggaaccgat gagtgcttca tatatcagcc cttctttaaa accaacaaaa
     2761 acattttgct gccgaagggc aagagcgtcg caatagctga gcgagggcag cgtggttgaa
     2821 taaacataat agccataatt ctgcttcggg atgcccgcaa gatcgatgtg aagcggctct
     2881 aaatattttg tgtgaagcat caacatgtta aaaccggaac ctgtatcaaa ttccgcgtcg
     2941 gcgggaatgc tgtcgttgat acaaacatgc acgaaaaagt cgagctgatc ttttccgttt
     3001 aattttaatt taatcggcac tctcgtcgca tttttcgaga tacgggcaat gctacttgtt
     3061 gtttcaatga tcaaactttt atgcttgaaa tcgatggtaa acggggtgtc gcggaagtag
     3121 ttcatggaaa gaaggccgtc acaaccgggc aacgcatcat atacaccaat aaccacattc
     3181 tgtcttgtaa aagttcccgc agagagcgat ggcaaaatgt acaacatacc cgtgatcgat
     3241 tctccgttat gcctcgttcc tgtatgcaat cctgcttcct gaaggtgata cctggcaaat
     3301 aagttttgcg aaacaactgt tataccgctg cccgtatcaa gcataaaccg cgcagtgtca
     3361 tttccgttaa cgagcatccg caaaaaaata taacctccgt cggttatctc gagcggtata
     3421 accgtttgag ccgatgtaat tgtgcatcgc agcgtcaaga gaaaaacaag tattgtcttc
     3481 atcgattgaa caacccagtg aacttacttt gttttagaat tcaatctctg caaattattg
     3541 cgggcggtga ttagtcattt gttacttgta aaaatcccgc tacattacac ttccaaggat
     3601 ctagaaatgg aagtgagatt aggtctcaaa gaaaactggc agcaattcac tttgctcgtc
     3661 atcatcaatg cttttgttgg cggaatggtg ggacttgaac gaagtatctt accgcgcatt
     3721 gccgaaacag aatttcacat cgcagcgaat acggcgatcc tttcgtttat cgtggtattc
     3781 ggtttcgtaa aagcctgcac gaattatttt acaggcgcgc tggcaaacaa agtcgggaga
     3841 aagaacctgc ttaccatcgg ctggctgatt ggtatccctg tcccttttgt tttgatgtat
     3901 gcaaacagtt gggactggat cgttgcagcc aacgttttac tcggcatcaa ccagggattg
     3961 acgtggagca gcaccgttgt gatgaagatc gatctggttg gtgaaaaaca acgcggactt
     4021 gcgatgggct taaacgagtt tgcaggatat gtcgcggtgg cgattgttgc gtttcttacc
     4081 ggctggatcg catcaaacta cggcctgcgc ccataccctt tttatacggg tgttgtgtta
     4141 tcaatgatcg gcctcttgtt aagctggctg tttgtgaaag acaccaaaca tcatatcacg
     4201 gcggagacaa caacgagtaa agttcctaaa ctcagaaacg tattttggga cacgacgctg
     4261 aacaataaaa atctgagttc cgttacgcag gctggcctcg tgaacaatct aaatgatggc
     4321 atggcctggg gaatttttcc aatattcctt gcggcaaaag gttttgatat cgctcaaatc
     4381 gcgatcgtaa ctgcagtata tcccgcagtc tggggactcg gtcaactgct caccggaaaa
     4441 atggcggacc atttttgtaa aaaagatctt ctctttatcg gaatgctttt gcagggaatt
     4501 gcactcatta tttttctttt cgctgaaacg atcactcact ttataattct ttcagcgctt
     4561 cttggtattg gcaccgcgct ggtttatcca acattccttg caacggtcgc ggagaacaca
     4621 catcccaccg accgggcaaa gagccttggt atctttcgtt tttggagaga tctcggttat
     4681 gcgatcggcg caattcttac cggcataatt gcagatactt taggaataaa cgcgtcgatc
     4741 atggtgatcg gatcccttac gatgttttcc gcagcaatta tattttatcg tatgcaatgc
     4801 ggtgacgatg atcccaggaa attttcgaag tggttgtatt ttcaaaaaaa agcagtgtct
     4861 tagccagtat tgagtttctt cgtgcaattt gtgttaagtc atttaataaa cacaattcgt
     4921 aaatttcttt cggttgcagt ttgtgtgtct tgcagcttaa atcaaagcaa tgaaagatcg
     4981 tgggggcatt gacgaaaaag gaatactgat gaaggatcgc ccaataaaaa ataaacatcg
     5041 tcacttttga ggcaagcgtt actgccaaac ttaacctctg tccaaaatca tgaatagatc
     5101 gatctcaaca ccagtaaaaa ttagcagtgt cacaaagcgt gagattttta tttcaactct
     5161 catcatcggg ttgctgtttt ttatctttgg tttcatctcc tgggtgaatt ctatattgat
     5221 accctatttc aagatcgcat gtgagctcaa caactttcaa tcatactttg taaccttcgc
     5281 gttttatatt tcatacttca ttatgtcagt gccggcggct tacattttaa aaaattcagg
     5341 gtttaaaaaa ggaatgatgc tcggcttttt cagcatgtcg ctgggcgcgt taatttttat
     5401 tccagcagca ttaacgagaa catacgagat attcctggtc ggccttttta taattggtgc
     5461 agggctcgcc attcttcaaa ctgcagctaa tccatacatc actattttag gtccgaaaga
     5521 aagagcggcg caacgcataa gcatcatggg catttgcaac aaaggtgcgg gcattctcgc
     5581 accgctcatc tttgccgcgg ttgtgttgag agcaacagac acccaattat tcaaagaatt
     5641 agcgacgatg aatgaagtgg cgaaggacgc ggcacttgac caactcatcc ggcgagtgat
     5701 cgcaccttat acaatcgtcg gcatggtatt gtttggactc ggattactgg ttcgttattc
     5761 accgctgcct gagctgaaca ctgaacacga atctgcggaa gtcgccgcga cgaatgttca
     5821 caagaaaaat atttttcagt ttccccacct tgtacttggt gcaatagcca tttttcttca
     5881 tgtaggaacc caggtgatcg cgatcgatac catcatcggt tatgctggtt ccatgcacat
     5941 cagtttgctt gaggcaaaag tgtttccgtc ctacacactc actgcaacca tttgcggtta
     6001 catagttggc attatttgta ttccgaagtt catcagccag ctgtatgcgt tgagaatttg
     6061 cactttgctc ggaacgctgt tgacattact catcattttt gcgaaaggaa acgtcgactt
     6121 gcttggtcat cacgttgaca tttcgatctg gttcgttgtg ctgctcggct tagcaaactc
     6181 gttggtttgg gcagggattt ggccgctcgc tctcaacggg ttaggaagat ttacgaagct
     6241 tggagcgtcg gtgatgataa tgggtttatg cggaaacgcg atcatcccgc ttatctacgg
     6301 ccgcctcgcc gacgtgtatg atgtgcgaag tgcttactgg gttttgttcc cctgttattt
     6361 gtatctcatt ttttatgcat ttcgagggta taaagtcagt cgatggagtg gcccgtaaaa
     6421 acatggaagg cagtcgatgc gatactttgg aatgggcgca gttgttacga actgtcttgg
     6481 ttgatcatga agcaaagagc ggcatgcggt ttgatttcaa aaatctattg ttaacctaaa
     6541 aaattgccct atgttacaaa atctcctgca cttgttgcat atgttgatgc agttcttcgc
     6601 caaccacttc taaaaacggc gatcaacaag agcgaaataa atgattatat ctggcagaaa
     6661 gccggtgctc gttaacaaac gcgctgcaag agcaacggct ggtataatca ttttattttt
     6721 gttgctcatc gcagacagtc ttcaaaagtg agcgtacata aataaacgcg ccagtgaagc
     6781 ttgcgtcttt tgtacccctg gccataatac ctccaaagtg ctctaccata ttttgcaatg
     6841 gatgccataa taccatcacg tttttctcaa catttaccac ctgaccagtc gttttctttt
     6901 tttaatttag taattgacgc gactgacatc agggcgcact tcatattagt tgcctgtata
     6961 cgaaatatac tgagttctat caccaaagca ttattaaaaa agaacaattt tgggcagaac
     7021 aggtacgtat catctccggt ttcgggagtc ttccgtcatc atgaaattac aatgagaaag
     7081 gattttgcga attttcgctg gcttagccgt ttcaatagtt gatccactac gaagcagaat
     7141 accgattgta tcatcaatgc ctcctcgggg ttcttacgcc tcgtacaaat tctgcggcct
     7201 taactttatt gaaaatataa atcatgaatt ataatatcag cctcgacgca aagtttcagc
     7261 atcttgagct catcgatgtt aatgccctcg tagaagcaac aaaagaga
//
LOCUS       DASQJI010000504         9615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_60875,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000504 DASQJI010000000
VERSION     DASQJI010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9615
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60875"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VEV83_13755"
     CDS             <1..405
                     /locus_tag="VEV83_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HYK46237.1"
                     /translation="EIEIGKARVVQYGDDISIITYGAGVHWALEYAHANQDVSIDILD
                     MRTLLPLDYTAIEESVERTGKVLILHEDTLTGSIGGEIAAWISEHCFEMLDAPVLRCA
                     SLDTPVPFNIELEKNFLAKARLEASVEKLMNY"
     gene            405..965
                     /locus_tag="VEV83_13760"
     CDS             405..965
                     /locus_tag="VEV83_13760"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HYK46238.1"
                     /translation="MPTLYIIAGPNGAGKTTASQTLLPEVFHTSIFINADEIAFQLNP
                     SNVQGAAIRAGRIMLLEIEKRLFEQTTFSIETTLATRSYLNLVRRAQFTGYEVVLFFF
                     YLSSVNLAKQRVALRVSKGGHNIPEEVIERRYVAGLRNLFEFIKIVDQWFIYENTNTP
                     AELIADGELGKSPVIRNFESWKKLKQ"
     gene            944..1123
                     /locus_tag="VEV83_13765"
     CDS             944..1123
                     /locus_tag="VEV83_13765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46239.1"
                     /translation="MEKIKTVGFSKKHEELGRSVDAALRKVSKKLIEETKKENGYLVV
                     ADKKGTVKKIPAKDL"
     gene            1210..3258
                     /locus_tag="VEV83_13770"
     CDS             1210..3258
                     /locus_tag="VEV83_13770"
                     /inference="COORDINATES: protein motif:HMM:NF037004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYK46240.1"
                     /translation="MTDVCEAQPLNKAIGNAYIITRMAEKFHVQPRPLNDTFSNDLFN
                     RFLNDLDEERIYFNREDIARLSAYSIQLDDQVKQKKIDFLKVLVPIYQKRLQQADSLI
                     DVISKKPLNFTLAEKLSVAEDSSYPSDLSSMYTKLYKKVKFDVLQDLLDLNDDISSKN
                     PARQKQVIDSAQTVLQKKTESVYKRNIKRILQSPGGVEEFTGTSFCKALAVCYDPHTE
                     YFPLTEEENFESELGKQRFRFGFAIKEDENGGVIINELQPGSPAFKCGLLNKGDKFIN
                     LQWEGQSAIDVSDANTDELGEILSQSNHDKLAITVKKPDGTLRTVSLMKEEGEADEDN
                     RVKSFVLKGTKTVGYVSLPAFYHNWDDDQEGDNGCANDVAKEIVKLKKENIQGLILDL
                     RYNGGGSVREAVQLAGIFIDAGPVAQEKNRLDVKVTTLKDINRGTIYDGPLLLLVNGY
                     SASASELVAGMLQDYNRALIVGSTTYGKATAQFVLPLDTNVNMEKYNASRQADAYLKI
                     TMSKLYRVNGTTAQFTGVKPDVELPDFLQADPQRESNEDFALQPTSIDANKYYQPYHP
                     IGVTGLQAIAKNEIDTIVFFKYLEAYIRQYKLLNTPKDVSLKWTDAVEEEKEDTLPTD
                     FHTTDYSKTTYSIQNNSYELQRLQTDAGLKQSNDIFIGYLSHDPYLKISYDLVSDMSK
                     "
     gene            3346..4398
                     /locus_tag="VEV83_13775"
     CDS             3346..4398
                     /locus_tag="VEV83_13775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46241.1"
                     /translation="MRPFSTSLRVLGISFLLPLASALTAQDLNNAGAYMTVISNAQTE
                     MNKTYMAYLSAVAHSKARKVEKLRQQTVESITNCKYKIIDVPFYKGDNSLRKSSITYI
                     DMVYKVFNDDYAHIVNIEELAEQSFDEMQLYILLQEKTDEKLREAYDTMYQASKNFAK
                     KYNVTVIETKSELDDKMEISSGVNHYKNQLYLIFFKCNWQDQQIDEAINQKKFTGIEQ
                     ARSALGNYAKEGLLALDSLSNFKGDHSLAQACRQALLFYQKHAETNLPKMTDFFLKEE
                     NLAKMKKSIDSKPQSSLTKQEIDAYNKAVNDFNVSVNSYNQLNDNVNQNKDQITKAWS
                     EAEKQFLDAHVPYYKS"
     gene            4472..4768
                     /locus_tag="VEV83_13780"
     CDS             4472..4768
                     /locus_tag="VEV83_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46242.1"
                     /translation="MYVIRDIFYLKYGHYRDAKQLLDEAFENDLMPKQPGTRLLTDFT
                     GDAYRLIFEQSCNSLAEFEQTLSSAMNADEWQKWYKKFRDHVKSSYREILKQVM"
     gene            4897..7176
                     /gene="bglX"
                     /locus_tag="VEV83_13785"
     CDS             4897..7176
                     /gene="bglX"
                     /locus_tag="VEV83_13785"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HYK46243.1"
                     /translation="MKTLFASCLLLLACIVSNAQGNTQDQKMNAFVNDLMSKMTLEEK
                     IGQLNLVTPGGAVTGSVVSSDVDNKIRNGKVGGIFGINGPDKIRQAQDIAVKNSRLHI
                     PLFFGLDVIHGHRTIFPIPLGISCSWDIPMIEQTARIAATEAAADGLNWVYSPMVDIA
                     RDPRWGRIAEGAGEDAYLGAQVAGAMVRGYQGNDVSANNTVMACVKHYALYGAAEAGR
                     DYNTVDMSRVKMYQYYLPPYKAAVDAGVGSVMSSFNEVDGVPATGNEFLLNEVLRKQW
                     GFKGFVVSDYTSVSEMMNHGIGDLQQVSAQALKAGLDMDMVSEGFLNTLNKSLQEKKI
                     TQKQIDDACRRILEAKYKMGLFADPYRHCDAQRAQTQIMTDNNRMASRKAAEHSFVLL
                     KNNNNILPLKKTGTIALIGPLADNQRNMLGTWNIRGEYKEDITVLQGIKNIAGSDVNV
                     LYAKGANISDDSMLVRNVNTFAKEIDVDSRSAQDMTDEAVATANKADVVVAVLGEAAD
                     FSGEASSMSEISLQRSQQDLLDALLQTGKPVIVVLFNGRPMTLSWEDAHVNALLDVWF
                     PGTEAGNAIADVLFGNYNPSGKLTTTFPQNVGQIPIYYNHKNTGRPLNPGDGHKFKSD
                     YLDVSNEPLYPFGYGLSYTTFSYGDIHLSKTNIAGNEGLTATVTVTNSGNYDGEEVVQ
                     LYLHDKIASITPPVKQLKGFQKISLKKGESKDVVFNITHNDLMFYDEGLKLVAEPGEF
                     EVMIGPNSRDTKSVSFSLK"
     gene            complement(7197..8120)
                     /locus_tag="VEV83_13790"
     CDS             complement(7197..8120)
                     /locus_tag="VEV83_13790"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK46244.1"
                     /translation="MNVLITGGAGYIGTELVYKLGEMPEVANVIVYDNLSRGNYNLFI
                     GHKPAAQKIKFVPGEILDSRKLRNVLKNVDVVIHLAAKVTTPFANVDGHVYEQTNHWG
                     TAELIYALEESNVKKLIFLSSTGVYGNTREPATEETMAQPDSFYSISKLRAEQHVRRL
                     AEKMNTIIVRLANVYGYSKSMRFDAVINRFMFDAHFTQRITVNGSGNQHRSFIHIDKT
                     TDILSQLLGKNIPGDTYNLADKTLSILDIIEVMKNIYPDLESFFINQNYTGHNLEVAR
                     QSKLLNYVSMPDSNLEDELRSFKERFTFHSM"
     gene            complement(8186..8842)
                     /locus_tag="VEV83_13795"
     CDS             complement(8186..8842)
                     /locus_tag="VEV83_13795"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HYK46245.1"
                     /translation="MTVEQIADRIKIYKQLNLKLFTSSSFQTHSTVLLHILSRIDNTI
                     PVYFINTGYHFPETLSYRDQITKLFGVNLINVFSSTAKNTQRDANGRLLFASDPDLCC
                     HLNKVTPLEPILAQYDVWINGVRGDQGDLRKNFKVEEKAKLGTIRFHPMLDWTGKMIY
                     DYLREHKIPHHPLEEQGYFSIGCEPCTRKWDLNMDGRDGRWYGLKKTECGLNTELVVK
                     "
     gene            9073..9357
                     /locus_tag="VEV83_13800"
     CDS             9073..9357
                     /locus_tag="VEV83_13800"
                     /inference="COORDINATES: protein motif:HMM:NF015069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HYK46246.1"
                     /translation="MPGTQFNGNDIILFTGIAAGVLTAASMLPQVFKTLKTKKAEHVS
                     PLMLVILICGVALWLVYGILKNDMPIMLTNGFSIIVNLLMLFLRWRYKEN"
     gene            9421..>9615
                     /locus_tag="VEV83_13805"
     CDS             9421..>9615
                     /locus_tag="VEV83_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HYK46247.1"
                     /translation="MKARTLKRDKVNIITLGCSKNLVDSEVLSGQLQANEIDVVHENA
                     KLDHNIVVVNTCGFIDKAKEE"
BASE COUNT         2882 a         1961 c         2183 g         2589 t
ORIGIN      
        1 gagatcgaga tcggtaaagc aagggtcgtg caatatggtg acgacatcag tatcataacc
       61 tatggcgcag gcgttcattg ggcgctcgaa tacgcgcatg caaatcaaga tgtttcgatt
      121 gatattttag atatgcgcac attacttccg ctcgattaca cagcgatcga ggaatcagta
      181 gaacgtaccg ggaaagtgct gatcctgcat gaggatacat tgaccggcag tattggcgga
      241 gagatcgctg catggatcag cgagcactgt tttgaaatgc ttgatgcgcc ggtattgcgt
      301 tgcgcttctc ttgacactcc ggtgccgttt aatatcgaac tcgaaaaaaa ttttttagct
      361 aaagcaagac tggaagcgag tgtagaaaag cttatgaatt attaatgccg acactttata
      421 taattgcagg ccctaacggc gccggtaaaa caactgcttc tcaaacctta ttgcccgaag
      481 tttttcacac gagcatcttt attaatgcag atgaaattgc ctttcagctt aatccctcta
      541 atgtgcaagg agcagccata cgcgcaggcc gaattatgct gctcgaaatc gaaaaaaggt
      601 tgtttgaaca aacaacgttt tccattgaaa ccactttggc aacaaggtcg taccttaatc
      661 ttgtaagaag agcgcaattt accggctatg aagtcgtact ttttttcttc tatctttctt
      721 ctgtaaacct tgcaaagcaa agggtcgcat taagggtgag caaaggtggt cacaatattc
      781 ccgaagaagt tattgaacgc agatatgtcg ctggattaag aaatttattt gaatttataa
      841 agatcgttga tcaatggttc atttatgaaa atactaatac ccccgcagag ctaattgctg
      901 acggcgaact cgggaaatcg cccgttatcc gtaattttga atcatggaaa aaattaaaac
      961 agtaggtttc tcaaaaaagc atgaggaact cggtcgttca gtcgatgcag ctttaagaaa
     1021 agtctccaaa aaactcatcg aggaaacaaa aaaagagaac ggttatcttg ttgttgctga
     1081 taaaaagggc accgtgaaaa aaattccggc gaaggacctg tgacccgcct tgattcaatt
     1141 cccgaaaagt aaatgcgcca aaacttcctg atatcctcat ccaaaataat tgcgattcta
     1201 attttactaa tgaccgatgt ttgcgaagcg caaccgctaa ataaggctat cggcaatgct
     1261 tacattatta cccgtatggc tgaaaaattt cacgtgcagc caagaccact aaatgatact
     1321 ttctccaatg atctttttaa ccggttttta aatgacctgg atgaggaacg gatatatttt
     1381 aacagggaag atatcgcacg gctatctgct tattccatcc agcttgatga ccaggtaaag
     1441 caaaaaaaaa ttgatttcct caaagtactt gtgccgatct atcaaaagcg ccttcagcag
     1501 gcagattcgc tgatagacgt gatctcaaaa aagccgctca attttacact cgctgaaaaa
     1561 ctttccgttg cggaggattc atcctacccc tctgatttaa gttcaatgta tacgaaactg
     1621 tataaaaaag taaaatttga tgtgctccag gacctgcttg atctgaatga tgacatctcg
     1681 tcaaaaaatc cggcgagaca aaaacaggtt attgacagtg cacaaacggt tctccaaaaa
     1741 aaaaccgagt ccgtttacaa acggaacatc aaacgcattt tgcaatcgcc gggcggtgtt
     1801 gaagaattta caggaaccag tttttgcaaa gccctggcag tgtgctacga tcctcatact
     1861 gaatattttc cccttactga agaagaaaat tttgagagcg aattgggaaa gcaacgtttt
     1921 cgttttgggt ttgcgatcaa ggaagacgaa aacggtggcg ttatcatcaa cgagctgcag
     1981 cccggcagtc ctgcgttcaa atgtggttta ttaaacaagg gcgacaaatt catcaacctg
     2041 caatgggaag gacaaagcgc cattgatgtc tcagatgcga atactgatga gttaggagag
     2101 attctttcgc aaagcaacca tgataaatta gcgatcacag tgaaaaaacc ggatggcaca
     2161 ttgcgaactg tttctttaat gaaagaagaa ggcgaagccg atgaagacaa tagggtgaaa
     2221 agctttgttc taaagggaac gaaaactgtc ggttatgttt cactgcccgc attttatcac
     2281 aattgggatg atgaccagga aggcgataat ggctgtgcta atgacgtggc aaaagaaatt
     2341 gtaaaactga aaaaagaaaa tatccaggga ttgatccttg acctgcggta caacgggggc
     2401 ggctctgtgc gggaagcggt tcagctagcc ggtatcttta tcgatgccgg cccggtagca
     2461 caggagaaaa atagactcga cgtcaaggtc accacgttaa aggatatcaa tcgcggaacg
     2521 atctatgacg gtcctttgct cctgcttgta aacgggtaca gtgcctcggc gtcggagctt
     2581 gtagcgggca tgctgcagga ttataaccgg gcgttgatag tcggctcaac cacttatgga
     2641 aaggccactg cgcaatttgt tttgcctctt gatacgaatg ttaacatgga aaaatataat
     2701 gcttcgcggc aggcagatgc ttacctgaaa attacaatga gtaaattgta tcgcgtgaat
     2761 ggaaccactg ctcaattcac cggtgttaaa ccggacgtag aattacctga ttttctccag
     2821 gctgatccgc agcgtgagtc aaacgaagat tttgcacttc agccaacaag catagacgca
     2881 aacaaatatt atcagcccta tcatccaatc ggcgtcactg gtttgcaagc gatcgcaaaa
     2941 aatgaaatcg acacgattgt tttctttaag tatctcgagg catacatccg tcaatacaaa
     3001 ttactcaaca cgccaaaaga cgtgtcgctg aaatggacag atgcggttga agaagagaaa
     3061 gaggatacgc tgcctactga ttttcacacc acagattata gcaaaaccac ctactcgatc
     3121 caaaacaatt cgtatgaatt gcaaaggctt caaacagatg caggactaaa gcaatcgaac
     3181 gacatcttca ttggatattt gtctcatgat ccctatctaa agatcagcta tgacctggtt
     3241 tctgacatga gtaaataaac gggaattttt ttttgcactt acccgaaaaa cctattaatt
     3301 tgttttgatt tattcgactc gctacttaat tcaaaaccga ttgcaatgag acctttttca
     3361 acctcgttac gcgtcctggg tatctctttt ttgttgcctc ttgcttccgc attaacggca
     3421 caggatctta ataatgcggg cgcttatatg acggtaataa gcaatgctca aactgaaatg
     3481 aacaaaactt atatggctta tttgagtgcc gttgcacaca gcaaagcaag aaaagttgag
     3541 aaattacgcc agcaaactgt tgagagtatt acaaattgca aatacaaaat aattgacgtc
     3601 ccattttaca agggtgataa ttcgttaaga aaaagcagca ttacttatat agatatggtt
     3661 tataaggtgt ttaacgacga ttatgcacac attgtaaata tcgaagagtt ggcggaacaa
     3721 tcgtttgacg aaatgcaact ctatattttg ttgcaggaaa aaaccgacga aaaattgcgc
     3781 gaggcgtatg acactatgta ccaggcaagc aaaaattttg caaagaaata caatgtgact
     3841 gtcattgaaa ctaaaagcga attggatgat aagatggaaa tctcttcggg cgtaaatcat
     3901 tataagaacc agctgtacct gattttcttt aaatgtaact ggcaggatca acagatcgat
     3961 gaagccatca atcaaaaaaa atttacaggc atagaacaag cgcggagtgc attaggcaat
     4021 tatgcaaagg aaggtttgct cgcgctcgat agtttgagca atttcaaggg cgatcattct
     4081 cttgcacagg cttgcaggca agcgttgtta ttttatcaaa agcacgcaga aactaatttg
     4141 cccaaaatga cggatttctt tttaaaggaa gagaaccttg ctaaaatgaa aaaatcgatt
     4201 gattccaaac cccaaagttc gctgactaaa caggagattg atgcatacaa taaagctgtg
     4261 aatgacttca atgtgtccgt caattcatac aaccagctca atgataatgt aaatcagaac
     4321 aaagaccaga tcactaaggc atggtcagag gcggaaaaac aattcctcga tgcgcacgtt
     4381 ccatattata agtcatgaaa tttgccctcc caattaataa ctttactgct ggctaatttc
     4441 aagatttcct cacaagttaa aaccttattg tatgtacgtt atccgcgaca ttttttattt
     4501 gaagtacggg cattatcgtg atgcaaagca actgctcgac gaagcgttcg aaaatgatct
     4561 catgccaaaa caacccggca cgcgtttgct caccgatttt accggcgatg cctatcgcct
     4621 gatctttgaa cagagttgca attcgctcgc tgagttcgaa caaacgctaa gcagcgccat
     4681 gaatgcagat gaatggcaga aatggtataa aaaattcaga gatcatgtga aaagcagtta
     4741 ccgcgaaata ttaaagcagg taatgtaaat tttcgctctc ttagaaccgg cctggcacat
     4801 gtaagccgcc gggccgttcc cagcacagtt aaagtattcc actactttag cgccagcact
     4861 attctctctc tttatatttg aacaaataaa catcgcatga aaacattgtt tgcatcatgt
     4921 ctcttattgc ttgcctgtat tgtttccaat gcacagggaa atacacaaga tcaaaaaatg
     4981 aatgcttttg taaatgacct gatgagtaaa atgacgctcg aagaaaagat cggccagttg
     5041 aacctggtga cgccgggtgg tgcagttacg ggatcagtcg tgagcagtga tgtcgataat
     5101 aagattcgca atggaaaagt aggcggcata tttggtatca acgggccgga caaaattcga
     5161 caggcgcagg atattgccgt caagaattcc cggcttcaca ttccactatt ttttggtttg
     5221 gatgtgatcc atggtcaccg cacgatattt cctataccat tgggcatttc atgttcatgg
     5281 gatataccaa tgatagaaca aaccgcgcgc atcgcagcaa cagaagctgc agcagatggt
     5341 ttgaactggg tgtattcgcc aatggttgat atcgcacgtg atccacgctg gggcagaatc
     5401 gctgaaggtg caggcgagga tgcatatctc ggtgcacagg ttgctggtgc tatggtgcgc
     5461 ggctaccagg gcaacgatgt ttccgcaaat aacaccgtga tggcatgcgt gaaacattat
     5521 gctttatatg gcgctgcaga agccggccgt gattacaata ccgttgacat gagccgcgtg
     5581 aaaatgtatc aatactattt gccgccttac aaagctgcag tcgacgcggg tgtcggaagt
     5641 gtgatgagct ctttcaatga agttgacggc gtaccggcaa ccggaaatga atttttatta
     5701 aatgaagttt tgcggaaaca gtggggcttc aaaggttttg tggtgagcga ttacacatcg
     5761 gtgagcgaaa tgatgaatca tggtatcggt gacctgcaac aggtgtctgc acaggcgtta
     5821 aaagccgggc tcgatatgga catggtgagc gagggttttc tgaacacgct aaacaagtca
     5881 cttcaggaaa aaaagatcac gcagaaacaa attgacgatg catgccggag aatactcgaa
     5941 gcaaaatata aaatgggttt gttcgctgat ccgtaccgcc attgtgatgc gcagcgtgcg
     6001 caaacacaga tcatgacgga taacaacagg atggcttcac ggaaagctgc cgagcattct
     6061 ttcgtgttgt taaaaaacaa caataatatt ttgcctttga aaaaaacagg aacgatcgca
     6121 ttgatcgggc cattggcgga taatcaaaga aacatgctcg gcacatggaa tatccgtggt
     6181 gaatataagg aagacattac ggtgttgcag ggaataaaaa acattgccgg aagtgatgta
     6241 aatgtgttgt atgcaaaagg cgcaaacatc agcgatgact ctatgcttgt tagaaatgtg
     6301 aacacctttg caaaagagat cgatgttgat tcacgttcgg cgcaagacat gacagacgag
     6361 gccgtcgcaa ctgcgaacaa agctgatgtt gttgttgctg tgttaggcga agctgctgac
     6421 ttcagtgggg aggcaagcag catgtcagaa attagtttac aaagaagtca acaggacctg
     6481 ttagacgcgt tactgcaaac tggtaagccc gttatagtag tgttgttcaa cggaaggccg
     6541 atgacgctga gttgggaaga tgcgcatgtg aatgcgttgc tggatgtttg gtttcccgga
     6601 acggaagcgg gtaacgcgat cgcagatgta ttgtttggaa attataatcc ttcaggaaaa
     6661 ttaactacaa cattcccgca gaatgtcgga caaatcccaa tatattacaa tcacaagaac
     6721 acgggccggc ctttgaaccc gggcgatggc cacaaattca aatctgatta tctggatgta
     6781 tccaacgaac ctttatatcc attcggatat ggattgagtt acacgacgtt ttcttatgga
     6841 gatattcatc tcagcaaaac aaatatcgca gggaacgaag gtttgactgc gacggttacc
     6901 gttaccaatt ctggcaacta cgacggagaa gaagttgtgc agttgtacct gcacgacaag
     6961 atcgcaagta tcaccccacc ggttaagcaa ttaaagggct ttcaaaaaat atctttgaag
     7021 aaaggagaga gcaaggacgt tgttttcaac attacgcaca atgatctgat gttctacgac
     7081 gaaggtctga agctggttgc ggagcccgga gagtttgaag ttatgatcgg ccccaattca
     7141 cgggacacaa aatccgtttc attttcgttg aaataagaac tcacgactcg tttgctctac
     7201 atcgaatgaa acgtaaatct ttctttaaat gaacggagtt catcttcaag gttgctgtcg
     7261 ggcatcgaca cataattcag caatttactt tgacgcgcta cctcgagatt atgaccagta
     7321 taattttgat tgataaagaa tgactcaaga tcggggtaga tgtttttcat tacctcaatg
     7381 atatcgagaa tgcttaatgt tttgtctgcg aggttgtaag tatcgcccgg aatattcttg
     7441 ccgagtaact gcgacaaaat atcggttgtt ttgtcaatat ggataaagga acggtgctgg
     7501 ttgcctgaac cgttcactgt gatgcgttgc gtgaagtgtg catcaaacat gaaacggttt
     7561 atcaccgcat caaagcgcat actcttactg taaccgtaca cattagccaa acgaacaatg
     7621 atggtgttca ttttttcagc aagccttcgc acatgctgtt ctgctcttag ttttgatatg
     7681 gaataaaaac tatcaggctg cgccattgtt tcttcggtcg ccggctccct ggtgtttcca
     7741 tacacgccgg tactgctgag gaagatcaat ttttttacat tgctttcttc cagcgcatag
     7801 ataagttcgg cagtgcccca gtgatttgtt tgttcataaa catgcccatc tacatttgca
     7861 aacggtgttg tgacctttgc cgccaggtga atcacaacgt ccacattttt tagcacattg
     7921 cgcaacttgc gggaatctaa gatttctccc ggtacaaatt tgatcttttg agcagcgggt
     7981 ttatgaccga tgaatagatt ataatttcca cgacttaggt tatcatacac gatcacgttg
     8041 gcaacttccg gcatctcgcc gagtttgtaa acgagttctg ttccgatata accggctcct
     8101 ccggtgatga gtacattcat tgtttgctac ctgttagttg tggcttgcaa tcgtagcatt
     8161 ggtgttgtcg gacaaacgga atagtttatt taacgacaag ttctgtattc aatccgcatt
     8221 cagtcttttt gagtccatac cagcggccat cgcgcccatc catattcaaa tcccatttgc
     8281 gtgtgcacgg ttcgcaacca atgctaaagt aaccctgctc ttcaagcggg tgatgcggga
     8341 tcttatgttc acgcaggtaa tcgtagatca tcttgcccgt ccagtcaagc atcgggtgaa
     8401 aacgaatggt gccgagtttt gccttttctt ccactttgaa atttttccgc aggtccccct
     8461 ggtctccgcg cacaccattg atccatacat cgtactgcgc aagtatgggc tcgagcggag
     8521 ttactttatt gaggtggcaa caaaggtccg gatcactagc aaataacaat cttccgtttg
     8581 catcccgctg tgtatttttc gcggtggaag aaaatacgtt gataagattt actccgaaca
     8641 gttttgtgat ctggtcacgg taactgaggg tttcgggaaa atgataaccg gtattaatga
     8701 agtaaactgg tatcgtgtta tcgattctgc ttaggatatg caaaagaact gtgctgtgtg
     8761 tttgaaacga agaactggta aacaacttca ggttaagttg cttatagatc tttatcctgt
     8821 ccgcaatttg ttcaacggtc atgcctgctc atttaggcac gcaagataat gaggaataat
     8881 aaacgttaat gttaatctga cactgcgctg acaatggtgg cgaaggcaca aaccattcct
     8941 gtgatggcaa atacaatgtg accggctggc tgattttatt tgatgatcta tttgatattg
     9001 tgtgatacga acgttcgctt gcattcgcat acgaaagttt cagaatggca taatttttaa
     9061 cctttgtttc gaatgcccgg aacccagttt aatggcaacg atataattct tttcaccggt
     9121 attgcggctg gtgtcctgac ggcggcatct atgcttccgc aggtttttaa gacactcaaa
     9181 actaaaaaag cggagcatgt gtcgccgctg atgctggtaa tattgatttg cggagtggcg
     9241 ctttggttag tctatggcat cttaaaaaat gacatgccga tcatgctgac gaatggtttt
     9301 tcaatcattg tgaatcttct catgctattt ctcaggtgga gatacaaaga gaattaggct
     9361 ttctctagat tttgaagatg tgatctgtcg ctgcgccgat gtacatttgc ggtctttgat
     9421 atgaaggcac gaacactaaa gcgcgataaa gtaaatatca tcacacttgg atgtagcaaa
     9481 aacctcgttg acagcgaagt gctgagcggc cagttgcagg cgaatgagat agatgtcgtg
     9541 catgaaaatg ctaaactcga tcacaatatt gtggtagtga atacctgcgg atttatagat
     9601 aaagcaaagg aagaa
//
LOCUS       DASQJI010000505         3887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2058954,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000505 DASQJI010000000
VERSION     DASQJI010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3887
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2058954"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2053)
                     /locus_tag="VEV83_13810"
     CDS             complement(<1..2053)
                     /locus_tag="VEV83_13810"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HYK46248.1"
                     /translation="MKTIYYIFFGLVAFASVSCNNTKHLAANQNLFVGSTEKMKSTEK
                     ISVHDRKELEEEMHGLVRPKPNTKLLGIRFKLSVYNMVKEPKKQKGLKYWLKYKVGEP
                     PVIASASALEKNRQVIQNHFDNKGYFQDSVLMDTSVKNKKLKVSYTATMGSRYRVREV
                     SYPNDSTVLAQQIQKATANKKDVLLKPSDPYDLDAIKNERSRIDARLKENGFFYFGPD
                     YFIADIDSTIGNRKVDIDMRVKPETPFPAREQYYINDVYVFSDFDINSDTSLIGAKKF
                     EGYTIIDPYNKFNPKIFSRTLVFKAGDLYNRTDHNLSLNRLITLGVYKFVKVRFEPAD
                     TANKLNAFYYLTPTNKKSIRFEVSALTKTNNSTGTQLSINWRNRNLLKGAELLTVSAY
                     TGAERQVSSGSSVNTLTGGTEVNLYVPRILAPFNLNTSSAFVPQTRFRAQYELYNKTT
                     EYLLTSALGSVGYIWKTRIPVEHELTPFIINYVQPRNITDSFQKVLDSNIVLARSIEQ
                     QFILGNSYNYNYNTLARANTDRNNFFFNGNVSLSGNLIGLITGANVKTGNQKEIFGTP
                     FNQYVRLEADARYYRRLGTQFRSFNARVLGGLGVAYGNTLNMPFIKAFFAGGVSDQRG
                     FRARTLGPGSYYAGNPRDTFVADQPGDIKLLTMLEYRDRLFSIVRWAAFLDAGNVWTL
                     RE"
     gene            complement(2085..>3887)
                     /locus_tag="VEV83_13815"
     CDS             complement(2085..>3887)
                     /locus_tag="VEV83_13815"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HYK46249.1"
                     /translation="LTGTYYTGEGRMDLNLAINSINLAIVKPFAVGQLDDITGIMKGN
                     VTIKGTTADPKVDGNFRFENASLVPTISGARFRLPDDAVAVNSQGIHFNQFTLLDSTG
                     NKAVLDGDILTTDFKNYSFNLTLNAENFMVVDAPKQTNRMVYGKLNITTDVEITGDMT
                     SPAITANLFVNKETDFAFIIPQTDPEVVNRQGVVNFVDKDNPVDSVDQVYVIDSLATT
                     KLAGFDVNVNIETDSLARFTIIVDERNGDALTLKGRALLNGGIDKSGKLTLTGNYELS
                     SGSYTVSLSFLKRQFLIQNGSTITWTGDPMTANINVTAEYLINTSSIDLMQSSLAGRS
                     STDVEKYKQKLPFRVILNMTGELMKPIVKFDITLPEREASQWQDVVTKLEQIRSDESE
                     LNKQVFALLLLGRFVQENPFASAAGGSTQNQIRESASRVLTDQLNNLAASLIKGVDIN
                     FGVTSGTDYETGQEANRTDLNVTVSKKLLNDRLRVSVGSNFQVEGPSPANQSTSNPAG
                     DVMVDYQLTKDGRYLLRLYRINEYEGVLEGQVVETGASFILVFDFDKISEIFKGRKEA
                     RRIRKYNKEVTKQQEQAQQQQKQQQSSEQTPPNP"
BASE COUNT          937 a          919 c          839 g         1192 t
ORIGIN      
        1 cttctcttag cgtccaaacg ttaccagcat caagaaacgc cgcccatcga acgatcgaaa
       61 ataaccggtc ccgatattcg agcatagtta gcaactttat atctcccggc tgatcggcga
      121 caaaagtgtc gcgtggatta cctgcataat aggagccggg tcctaatgtc cgtgctctaa
      181 aaccgcgctg atcgctaaca ccacccgcaa aaaatgcttt tatgaatggc atgtttaaag
      241 tattgccata tgcaacgcca agaccgccaa gtacacgggc attaaaggaa cgaaactgcg
      301 tgcccagtcg cctgtagtat cttgcatctg cttcgagcct tacatactgg ttgaaaggcg
      361 ttccgaagat ctctttctgg tttccggttt ttacgttagc acccgtgata agtcctatta
      421 aatttcccga caagctgacg ttgccgttga agaaaaaatt attgcggtcc gtattggccc
      481 gggcaagcgt gttgtagttg tagttataag aattccccaa tatgaattgt tgttctatgc
      541 tgcgagctaa cacgatattt gagtcaagca ctttttgaaa gctgtccgtt atatttcttg
      601 gttgaacata attaattatg aatggcgtga gttcgtgctc aacagggatc cttgtcttcc
      661 aaatgtatcc cacgctacca agtgcggagg taagcaggta ttcggttgtc ttgttataca
      721 attcgtattg agcgcgaaat cttgtttgcg gaacgaaggc gctgctcgtg ttcagattga
      781 acggggccag tattcgcggc acgtacaggt taacctcggt accaccagtc agtgtattca
      841 cgctgctgcc ggatgacacc tgccgttccg cccccgtgta cgctgatacg gtaagcagct
      901 ccgcaccttt taaaagattc ctgtttcgcc agttgataga taactgcgtt cccgtggaat
      961 tgttcgtttt cgtgagcgcc gatacttcaa agcggatcga ttttttgttt gttggcgtga
     1021 gataataaaa cgcgtttaat ttatttgctg tatccgccgg ttcaaaacgc accttcacaa
     1081 atttgtacac gccgagcgtt atgagcctgt tgagggataa attatgatcg gtacggttgt
     1141 acagatcgcc agccttaaat acaagcgtgc ggctaaatat ttttggattg aatttgttat
     1201 aaggatcaat aattgtgtag ccttcgaact tttttgcacc tatcaaactt gtatcactgt
     1261 tgatatcgaa atccgaaaac acatacacat cattaatata atactgctct ctcgcgggaa
     1321 aaggagtctc aggtttcacg cgcatatcga tgtccacctt gcgattccca attgttgaat
     1381 ctatgtccgc aataaaataa tcagggccga aatagaagaa cccgttttcc ttgagccgtg
     1441 catcgatcct gcttcgttca ttttttatgg catcgaggtc ataaggatcg ctcggtttta
     1501 ataatacatc ttttttattc gcggttgcct tttgaatttg ctgggccaat accgttgaat
     1561 cgttcgggta tgagacctcg cgcactctgt accttgatcc catcgttgca gtataactga
     1621 cctttagttt cttattcttc accgacgtgt ccatcaaaac agaatcctgg aagtaccctt
     1681 tattatcgaa atgattttgt atcacctgcc ggtttttttc gagcgcagac gcagaagcaa
     1741 taaccggcgg ctcacctact ttatatttaa gccaatactt caggcctttt tgtttttttg
     1801 gttccttgac catattgtaa acgctcagct taaaccggat gccaagcaat ttcgtattcg
     1861 gtttcggacg aacgagccca tgcatctctt cttcaagttc tttgcgatca tgcacggaaa
     1921 ttttttcggt cgacttcatt ttttcagtag agccaacaaa caaattctga tttgccgcaa
     1981 gatgctttgt attgttgcat gaaacggaag caaaggctac cagtccaaaa aatatgtaat
     2041 agatcgtctt cattcttcgc gcataaattg ttctgatgcg tgtatcacgg atttggcggt
     2101 gtttgttctg agctctgctg ctgtttttgc tgttgctgcg cctgttcctg ttgttttgtg
     2161 acttccttgt tgtatttccg gatccttctc gcttcctttc tgcctttgaa aatttcactt
     2221 attttatcaa agtcgaatac cagtataaaa cttgcgcccg tttcaacaac ctggccctcc
     2281 agcacgcctt catattcatt gatgcgataa agccggagca ggtaacgacc atccttggtt
     2341 agttggtaat cgaccataac atcgccggcc ggatttgaag tactttgatt ggcagggctc
     2401 ggaccttcaa cctggaaatt acttccaacg cttacgcgca accggtcatt gagtaatttt
     2461 ttcgaaacgg tcacattcag gtctgtgcgg tttgcttcct ggccggtttc atagtcagtg
     2521 cccgatgtaa caccgaaatt tatatctacg cctttgatca aactcgctgc aagattgttg
     2581 agttgatctg tcaaaacacg gcttgcactt tcgcgtattt ggttttgtgt tgaaccgccc
     2641 gctgcacttg caaaaggatt ttcctgcaca aagcgtccaa gcaataaaag cgcaaacacc
     2701 tgcttgttca gttctgattc atctgatctg atctgctcga gctttgttac cacgtcctgc
     2761 cactggcttg cctctctttc cggcaaagtg atatcaaact ttacgatcgg cttcatcagt
     2821 tcaccggtca tatttagaat gaccctgaat ggcaactttt gtttgtattt ctcaacgtcg
     2881 gttgatgacc gtcctgcaag agaagactgc ataaggtcga tcgacgacgt attgatcaag
     2941 tattccgcgg tgacatttat gttagcggtc atcgggtcac ctgtccatgt aatcgtgctt
     3001 ccgttttgaa tgaggaactg ccgctttaaa aaactcagcg ataccgtata tgacccactg
     3061 ctcaattcat agtttcctgt aagcgtgagc ttaccgcttt tgtcgatacc gccgttgagc
     3121 agtgcccggc ctttcaaggt caatgcatca ccatttcttt cgtccactat aatagtgaat
     3181 ctcgccaggc tatctgtttc gatgttcacg ttcacgtcga agccagctaa tttggtagtg
     3241 gctaaagagt cgataacgta cacctggtcg acactgtcaa ccgggttgtc tttatcaaca
     3301 aaattcacaa cgccctgccg gttcacaacc tcggggtcag tctgtggaat gataaaagca
     3361 aaatcggtct ctttgtttac aaataaattg gcggtgatgg ctggagatgt catatcgccc
     3421 gtaatctcta catcggtcgt aatattcaac ttgccgtaca ccatcctgtt ggtttgtttc
     3481 ggcgcgtcca ccaccataaa attttcggcg ttcagtgtga gattgaaact gtagttctta
     3541 aaatctgttg ttagtatgtc gccatccagc accgctttgt tcccggtaga atcgagtaaa
     3601 gtaaactggt tgaaatgtat accctgggaa ttgactgcta ccgcgtcgtc cggcaggcga
     3661 aatcttgccc cggagatcgt tggaacaagc gatgcatttt caaacctgaa gtttccgtcc
     3721 actttcggat ctgctgtggt tcctttaatg gttacgttcc ctttcattat accggtgatg
     3781 tcatctaact gaccaacagc aaaaggcttc acgatcgcaa ggtttatgct gttgatcgcc
     3841 aggttgagat ccatgcggcc ttcgcccgta taatatgttc ccgttaa
//
LOCUS       DASQJI010000506         5195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_61065,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000506 DASQJI010000000
VERSION     DASQJI010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61065"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VEV83_13820"
     CDS             <1..772
                     /locus_tag="VEV83_13820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose/galactose MFS transporter"
                     /protein_id="HYK46250.1"
                     /translation="GAREAYLSFEASRLQLPYIAIAGVLLLVGLLFFLVKLPKVHEEK
                     DTSFHIDFSVFSHKHFTWGVIAQFFYVGAQVCVSSFFIRYTIYTAGVTEAYINKYHLL
                     GILLLWFMVGRYVGTFLMTKIKPQYLLAFYSFCNILLLAYCVFIGGHGGMYALMGVEF
                     FMSIMFPTIFALGIKDLGNQTKIGSSFMVMAIVGGALIPLVLGYISRNINVQVAYSVP
                     LVCFFVILYYGWKGYKIQHVHYEMSDNNMRMEVADAGE"
     gene            1099..1950
                     /locus_tag="VEV83_13825"
     CDS             1099..1950
                     /locus_tag="VEV83_13825"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK46251.1"
                     /translation="MKPNPQILIPPLKFVVTVLISLFCFLACDKEETRSTAKSENVSS
                     GDASVDTAIITNGLVAWYTFKNGSLDDKSGKGNNIVFSNAMVTADKNGNATSAYLFNG
                     SSYMRVPNSPSLQLTNKITIFATVKVNGFYAGGCHGNRIVQKGYDDNTAGTYVLGFDD
                     AYYYNSNNCSNPVDTNHQNFIGSFGNSLFDKAFGVDSNFIKKGKWYSIAYTYDGSVIK
                     VYQNGTLKTSNSKSITLTPNSDDLFIGMTNINNAGFPYWFNGVIDEIRIYKRALSAAE
                     IKQLSGQ"
     gene            complement(2480..2553)
                     /locus_tag="VEV83_13830"
     tRNA            complement(2480..2553)
                     /locus_tag="VEV83_13830"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2517..2519),aa:Ala,seq:ggc)
     gene            2758..4356
                     /locus_tag="VEV83_13835"
     CDS             2758..4356
                     /locus_tag="VEV83_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK46252.1"
                     /translation="MKDNTHNSAATNDPGKESAENDLNKSQISRRKFVELASSAAVAF
                     TIVPRHVLGGKNYVAPSDKITLAYIGIGTQGIRELLPMLTNEQIQVVAVCDPQKNPVG
                     YRDWGKDYLKNEIRKTINDPNWTPGGDNIIPGGRDNGKSIVDGYYTNVRHAQNYNGCK
                     SYEDVRELLEKEKDLDAVKIMTPDHLHGILCMAAIKRGKHVLVHKPISNRLAEGKKVI
                     EMSRNNPNVITHLIPWDSNGSMDTVMAWINAGAIGTLTEVHNWTNRPVWPQYPDLPAD
                     KPPVPDGFNWDLWLGPEADRPYSPNYTNMVFRGWYDFGGGSMADMGHYSLWTVFNALQ
                     LTSPTVVIPNRSHVCAFHEPVPYRIPNDFSFPMASMVRFKYPANGKRPPVELCWYDGG
                     MRPPTPVELLDNNKELPQEGMMFVGENGKILAGFNVQDPQIISGKKMQEPGNGNADKR
                     DQVQLTTEALPLFVQACKTGKQYPGNFSEAEYLTEAVNLYAVALRANKVLNYDPTTHT
                     ITNAADANKYLSREYRTGWNPESI"
     gene            complement(4727..>5195)
                     /locus_tag="VEV83_13840"
     CDS             complement(4727..>5195)
                     /locus_tag="VEV83_13840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46253.1"
                     /translation="WYVDKIVQTFSRALPGSISEMMPDYGCPVQAWTIYGLAVPLVTY
                     VLGINPDAYNKSITISPHLPTGWDHAAIYQLPVGGDTISLVIKNNNSSTTYSLTSNAN
                     DWRYRLEINGLAGSKYKVNGKVLTAAADEIELKGKANEVEIELMPAHPTKENH"
BASE COUNT         1536 a         1084 c         1131 g         1444 t
ORIGIN      
        1 gggtgcaaga gaagcatatc tttccttcga agcctcacgt ttgcaactgc cgtacattgc
       61 tattgccggg gtattgttgt tggtggggct gctgtttttt cttgtgaagc ttcccaaagt
      121 tcatgaagaa aaagatactt cgtttcatat tgacttctca gttttcagcc acaaacattt
      181 cacgtggggc gtgatcgccc agttctttta tgtaggcgcg caggtttgtg tatccagttt
      241 ttttataagg tatacgatct atactgccgg agtcactgag gcttacatca ataaatatca
      301 tctgcttggt attctcttgt tatggtttat ggtgggacgt tatgtgggta catttctcat
      361 gacgaagatc aagcctcaat acctattggc gttttacagt ttttgcaaca ttcttctcct
      421 tgcatattgt gtttttatcg gtgggcatgg cggtatgtat gcgctgatgg gcgtggaatt
      481 ttttatgtcc atcatgttcc cgacaatatt tgctctcgga ataaaagatc tcggcaacca
      541 aaccaagatc ggctcatcgt ttatggtgat ggcaatcgta ggcggggcgc tgataccgct
      601 tgtactggga tatatttcaa gaaacataaa tgtgcaggtt gcttattctg ttccgctggt
      661 ttgctttttt gtgatccttt attacggatg gaaaggctat aagattcaac atgtgcatta
      721 cgaaatgagc gataataata tgagaatgga agttgccgat gccggggaat aacgcgcacc
      781 ataattttcc cgctacaatt tcttttccga gaagtgcaaa acgtgattaa ttaatcccga
      841 tcaatctcat gcgattaaac ctcaccaatt aaatctcctg gatcaaaatc cttataaaga
      901 aacgttctgt tcaagtcgca atcaaaccac agaattcaaa aatttactac aaaaaacgcc
      961 cacccctaaa ttgtattttc tggtaattaa ttcgtcgctt taaactttat tagatatttt
     1021 agagtactct tttacaaaac taaacgctgc gcaccagccc gaaaatcagt attcttcatt
     1081 cactaaaacg aaaccgctat gaaaccgaat ccacaaattt taattccccc tctgaaattt
     1141 gtcgtaaccg tcctgatttc cttgttctgt tttcttgctt gcgataaaga agaaacaagg
     1201 agtactgcta agtccgaaaa cgtatcctct ggcgatgcaa gtgttgatac agcaattatt
     1261 acaaatggcc tcgttgcatg gtatactttc aaaaacggga gtttggatga caagagcggc
     1321 aagggcaata atatcgtctt tagcaatgca atggttacgg cagataaaaa cggcaatgca
     1381 accagtgcct atttgttcaa tggaagtagc tatatgcgag taccaaacag tccatcgtta
     1441 caattaacga acaagataac cattttcgca acggtcaaag taaacggatt ttacgcgggt
     1501 ggctgccacg gaaatcgaat tgtgcaaaag ggctatgacg acaatacagc aggaacgtac
     1561 gtacttggct tcgatgacgc ctattattac aacagtaata attgcagcaa tcctgtagat
     1621 acaaaccatc agaattttat tgggtctttt gggaacagtc ttttcgataa agcttttggg
     1681 gttgattcta attttataaa aaagggaaaa tggtattcca ttgcttatac gtatgatggg
     1741 tccgttatta aagtgtacca aaatggcaca ttgaaaactt caaattcgaa aagcatcact
     1801 ttaacgccga attccgacga cctctttatc ggaatgacga atataaataa tgcaggattc
     1861 ccctattggt ttaatggggt aattgatgag atcaggattt ataagagggc cctcagtgca
     1921 gcggagatca aacaattgtc cgggcagtaa tttttgagtg agtgtgaaac aaatagagct
     1981 cgaaccagga ttcgggaaga tatcatccga tccccgagat ctgtaaagtt gataatggcg
     2041 gcaactttaa agactcaaat tttaaaggaa catcatgcga ttctcttttc tctttttgtg
     2101 ttcgttataa ctttggagta tccggacaaa ctttaggcaa tcgaccggaa tttttgaaaa
     2161 aagacagcat aatatcttca attgacaggt accttcagac gttctactat tataaatcaa
     2221 ctgacaaaaa gcccaggcca ctgattgttc aactccattc atggagcttt cctgttgact
     2281 ctttaagtac taagggactg gacactgagg caaactctaa aaataaattt tagaggagta
     2341 aacaagcatg caaaagcttg gtgtagcgaa tatgtaatag cggatataga ggcggttagg
     2401 ctaatactca atgccgataa gggtttcaat gaaaaaaaac agaagcaact ttttaaaaat
     2461 gtcgagctgt tcggtattgt ggagaatacc gggctcgaac cggtgacctt ttgcatgcca
     2521 tgcaaacgct ctagccaact gagctaattc cccttgcgac gcaaaaataa ttgcgaagta
     2581 tctctccgca aaacgaaagt ttaagtagct cggtgaccga ctatttgttc atagccagct
     2641 cgtctgccag agcgtaccaa tgactaacga aacgtcagga cgcgcggcag aaaaaatttt
     2701 ctctcgcgct gattatatca cgtaaatttt aatcatcttc aacgtaaata ttcctttatg
     2761 aaagacaaca cgcacaacag cgctgcaaca aatgacccag gaaaagaatc tgccgaaaac
     2821 gatttaaata aatcacagat cagccggcgc aagtttgtcg agcttgcttc atccgccgcc
     2881 gttgcgttta ccatcgttcc aaggcatgtg cttggaggaa aaaattacgt tgctcccagc
     2941 gacaaaatta cgctggcata tattggcata ggaacgcagg gcataagaga attattaccc
     3001 atgctcacca atgagcaaat acaggtagtt gctgtgtgtg acccgcaaaa aaatcctgtt
     3061 ggctacagag actggggcaa agattattta aagaacgaga tccgcaaaac gatcaacgat
     3121 ccaaactgga ctcccggcgg tgataacatt attccgggcg gaagagacaa tggaaaatca
     3181 attgtggatg gctattatac caatgtacgt catgctcaaa attataatgg ttgtaagtct
     3241 tatgaagatg tgcgcgaact actcgaaaag gaaaaggacc tggatgctgt gaagataatg
     3301 acacccgatc acctgcatgg cattctttgt atggctgcga tcaaacgagg taaacatgtg
     3361 cttgtccata aacctatttc aaataggctg gccgaaggaa agaaagtgat tgaaatgtca
     3421 cgcaataacc caaacgttat cacccatctc ataccgtggg attcaaatgg ctcgatggat
     3481 accgttatgg cctggataaa tgcaggtgcc attggaacac ttacagaagt tcataactgg
     3541 acgaaccgtc ctgtgtggcc gcagtaccca gaccttcctg cggacaaacc tcccgttcct
     3601 gacggattta actgggacct gtggctgggc cctgaagcag atcgtcctta cagtccgaac
     3661 tacacgaata tggtattcag aggatggtat gatttcggtg gtggttcgat ggcggatatg
     3721 ggtcattaca gtttatggac tgttttcaat gctttgcaat taacatcgcc cacagttgtt
     3781 attccaaatc gaagtcatgt ttgcgctttt catgaaccgg ttccatatcg tattcccaac
     3841 gacttttcat ttccgatggc gagtatggtg cggtttaaat atccagcgaa tggcaagagg
     3901 ccgccggttg aactgtgctg gtacgacgga ggcatgcgcc caccgacccc cgttgagttg
     3961 cttgacaaca acaaagaatt gccgcaggaa ggaatgatgt tcgttggcga aaacggcaaa
     4021 atacttgctg gcttcaacgt gcaggacccg caaattattt caggtaaaaa aatgcaggag
     4081 ccgggtaatg gaaatgcaga caagcgcgat caggttcaat taactacaga agcgttgcca
     4141 ttgtttgtcc aggcatgtaa aacaggcaaa caatatcccg gcaatttttc ggaagcagaa
     4201 tatttaaccg aggcggttaa cctgtatgct gtagcactaa gagcaaacaa agtgttgaac
     4261 tatgatccaa caactcacac cattactaac gcggcggatg caaataaata tttgagcagg
     4321 gagtacagga ccggatggaa tcctgaatct atttaaatcg ctaagcacga tttcacaacc
     4381 ttgaatttaa acttgcctaa gtggatgggc agcgtattta ccgtcatcgt cggcttgatc
     4441 ggcagttggt taaaatgcga cttcaaaccg aagtgatcga tcttggttac aaagcttccg
     4501 actattttaa aaaacatacc ggctggttta tctcatcgga ttttcagaat gaatgcgtca
     4561 taaaaaagag gtgcccgttg ggcaaggtga ttgactagaa agaatttttt gcagccgcaa
     4621 aaaaaagcgg tgtaaaagaa ttttttcgtt gaactgaatt gcgataagtt taaggacagc
     4681 catctcacat cttacgattc ttgcaaattt ttgaatcagt gtgatgtcag tgattctcct
     4741 tcgtcggatg agcgggcatc agttctatct ccacttcgtt tgccttacct tttaattcaa
     4801 tttcatcagc cgccgcagtg agcacttttc cattcacctt atacttgctc cctgccaacc
     4861 cgtttatttc tagcctgtat ctccaatcat tcgcatttga tgtcaacgaa taagtcgtgc
     4921 tgctgttgtt gtttttaatc acaagggaaa ttgtatcgcc acccaccggc aattggtaaa
     4981 tggccgcatg atcccagcca gtcggaagat gtggcgagat cgtaattgat ttgttgtatg
     5041 catcgggatt aatccctagt acgtaggtca ccaatggcac agccaaaccg taaatcgtcc
     5101 atgcctgtac agggcaacca taatcgggca tcatttccga aatggaaccg ggcaatgcgc
     5161 gactgaatgt ttgaacgatc ttatctacat accac
//
LOCUS       DASQJI010000507         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_368856,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000507 DASQJI010000000
VERSION     DASQJI010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368856"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1216)
                     /locus_tag="VEV83_13845"
     CDS             complement(206..1216)
                     /locus_tag="VEV83_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46254.1"
                     /translation="MKKIFFIGVIVSLFFSCGTEKPAPDVSNIHVALQLQRFDKDLFS
                     IDTNNVPKALNDLQKEYGSFLNDYLYNIMVLPPQPDSVAEKIRMFLHDYSFIYNTAQK
                     QFRDFDAEFKAINKGLQYAKYYFPGYKTPARVITFIGPVEGYGNVLTESGLAVGLQLY
                     LGKDFPVYHSEFISEVYPEYQQRRFEPAYVPVNCMKNVISDIYPEKNTSDPLIYQMID
                     AGKRLYLLDHFLPQMADTLKTGYTQAQLEGCYDNEADIWNYFVHNNLLFITDPIQIRD
                     YMADGPHTEAFGESSPGFLGQFVGWQIVKKWMAEHDKTTLPQLINTPEKQIYDEAKYK
                     PT"
     gene            1267..>1884
                     /locus_tag="VEV83_13850"
     CDS             1267..>1884
                     /locus_tag="VEV83_13850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HYK46255.1"
                     /translation="MSELCIMKIALAQQNYLIGDFENNTKKIIAAVEEAKKENADLVM
                     FTELCVCGYPPRDFVEFNDFINKCYAAIDEIKEHADTIAVLVGSPARNPVIEGKDLFN
                     AAFFLYEKEIKAEIHKTLLPTYDVFDEYRYFEPSFEWNIVPFKGKRLAITICEDIWNL
                     GDNPLYRVCPMDALMKQKPDLMLNISASPFDYTHHEDRKAIIKLNV"
BASE COUNT          546 a          391 c          409 g          538 t
ORIGIN      
        1 ctaaagatga actgatattg tgaatggtga atggtgaatt gtgaatggtc aatggctgtt
       61 gatggtccac gcaatctttt taaatctgcg agctaaatgg tttaaatgct ttatcgcaaa
      121 gaagaaatta tcctaatacc cgaatagcct aatatcccaa taaaccaatt cctcaaactt
      181 caaacatcaa acatcaaacc tcgaactacg tcggtttata cttggcttcg tcatagatct
      241 gtttttccgg ggtattgatc aactgaggca acgtcgtttt atcatgttca gccatccatt
      301 tttttacgat ctgccatcca acgaattgtc caagaaatcc cggagaagat tctccaaacg
      361 cttcggtgtg cgggccgtcg gccatgtagt cccggatctg gatcgggtcg gtgatgaaca
      421 gtaaattatt gtgtacaaaa taattccaga tatcagcctc gttatcataa caaccttcaa
      481 gctgcgcttg cgtgtaaccg gtttttaaag tatcggccat ttgaggaagg aaatgatcca
      541 gcaggtataa acgttttccc gcatcgatca tctggtagat caacggatcg ctggtatttt
      601 tttccgggta aatatcactg atgacgttct tcatgcaatt gaccggaacg tacgcgggct
      661 caaagcgtcg ttgctggtat tctggatata cttctgaaat gaactcggaa tgatatacag
      721 gaaaatcttt cccgaggtac aattgtaaac ctactgcgag gccactttct gtcaacacat
      781 ttccatatcc ttcaacagga ccaatgaatg tgataacgcg cgctggtgtt ttataaccag
      841 gaaaataata tttggcatat tgtaagcctt tgttgatcgc tttgaattcg gcatcaaagt
      901 ccctgaattg tttttgtgcg gtgttataaa tgaagctgta atcatgcagg aacattctta
      961 ttttttcagc aacgctgtcc ggttgtggcg gcagtaccat gatattgtac aggtaatcgt
     1021 tcaggaaaga accgtactct ttttgtaaat catttaatgc tttgggaaca ttgttggtat
     1081 cgatcgaaaa gaggtctttg tcgaaacgct gcagttgcaa ggcaacatga atgtttgaaa
     1141 cgtccggcgc cggtttttca gtgccgcagg agaagaaaag agaaacaatt acacctatga
     1201 aaaaaatttt cttcataccg ctaattaaac gcttgctcat gaaagcaagt tgttaataat
     1261 ttttatatga gcgaactttg catcatgaag atcgcactgg cgcaacagaa ttatctcatc
     1321 ggcgattttg aaaacaatac gaaaaagatc atcgccgcag tagaagaggc aaagaaggag
     1381 aacgctgacc tggtcatgtt tacagagcta tgcgtttgcg ggtacccgcc ccgcgacttt
     1441 gtcgagttca acgatttcat caacaaatgt tacgcagcca tcgatgaaat aaaagaacat
     1501 gcagacacta ttgcagtact cgttggctcg cccgcgcgta acccggtgat cgaaggaaaa
     1561 gatcttttta acgccgcctt ttttttatat gaaaaggaga tcaaagcgga gatccataaa
     1621 acattgttgc cgacgtatga tgtgtttgat gaataccggt attttgaacc gtcattcgag
     1681 tggaatattg ttccttttaa aggtaagcgc ctcgccataa ccatttgtga agacatctgg
     1741 aatctcggcg acaatcctct ttaccgggtt tgcccgatgg atgctttaat gaagcagaag
     1801 ccggacctga tgctcaatat cagcgcttca ccatttgact atacgcacca cgaagaccgg
     1861 aaagcgatca tcaagctgaa tgtt
//
LOCUS       DASQJI010000508         3760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2059248,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000508 DASQJI010000000
VERSION     DASQJI010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2059248"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1200
                     /locus_tag="VEV83_13855"
     CDS             <1..1200
                     /locus_tag="VEV83_13855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HYK46256.1"
                     /translation="NSVLIPYFKLTCELSVKEAMLVAFAFYISYFVMAIPSSFILKKT
                     GYKNGMMFGLFVMAAGALVFLPAASTRAYPIFLLGLFIEAAGLTLLQTAANPYITILG
                     PIESAASRISIMGVCNKTAGAIAPLLLVGAIVKNPDEIDQVKTQLLTMTRIQQEHVLD
                     ELSARLIMPYIVMAVVLVCLGLTIKLAHLPDINDETSNALPPSVPKENKSLLQHRHLV
                     LGAIAIFCAVGVEVLAVDSIINYAQYTGLSFREAKYFATYTLLLMIASYCIGIFTIPK
                     LIKQRKALMLSALIGLLFSIVAISIKGAGSVWFIAFLGLGNALLWPAIWPLSLEGLGK
                     LTSRGSALLIMGVIGGGLLPLLYGAISDAANPRIAYAVLIPLYLFILYFSLSGYKSSY
                     RSLRPEH"
     gene            1247..2788
                     /locus_tag="VEV83_13860"
     CDS             1247..2788
                     /locus_tag="VEV83_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46257.1"
                     /translation="MPVALGSSQGKWLMTATILASAMAFIDGTALNVALPALQKNLNA
                     SAADLFWILNAYLLMLASLILIGGSLGDKLGRKKIFMLGILIFIVGSAACGFATTVFY
                     LITFRVIQGIGGALMIPGSLALISSSINENQRGKAIGTWSAATTAVTMGGPIVGGALA
                     DAGLWRYIFFINVPIGVAALLILLRSVKETRDEDSDTAIDYAGAFVVTISLALLTYGF
                     LKIPARGFNDVQVIISLAAGGALLSFFILIERKNQHPMMPLHLFSNRNFSGTNLLTFF
                     LYAALGGGILFLSLNLVQVQGYSQLQSGLTFLPFTILMITITRFAGSLSDRYGPRWFL
                     VLGPAIVGVGLLILSFVKQTQGPADFWRSFFPGILIFGLGMAFTVSPLTATVMGSLQS
                     HFSGTASGINNAVTRISNVFANAVFGALAVLFFTGALQKEVDHLPFDVNEKQLILKQA
                     ANLGNAKPPAEISEQKAIIENAFHASFISSYQNIMRICAALAFLAAVVAFLFIRNIRK
                     LRVDR"
     gene            complement(2826..3041)
                     /locus_tag="VEV83_13865"
     CDS             complement(2826..3041)
                     /locus_tag="VEV83_13865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46258.1"
                     /translation="MMEEEIDFGFQSRVERFIYWSLMLLRADARSRPGMTAGWVPYVP
                     AANWLSRIFVFDLNGTTRYVKRTTVDS"
     gene            complement(3126..3266)
                     /locus_tag="VEV83_13870"
     CDS             complement(3126..3266)
                     /locus_tag="VEV83_13870"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK46259.1"
                     /translation="MQYGGTVYILTNVHHEVLYIGVTSDLFTRIPEHICQGLSKVIHR
                     KI"
     gene            complement(3500..>3760)
                     /locus_tag="VEV83_13875"
     CDS             complement(3500..>3760)
                     /locus_tag="VEV83_13875"
                     /inference="COORDINATES: protein motif:HMM:NF015597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HYK46260.1"
                     /translation="TMDEIFEVLTLIQTGKLPPRPVVCLGKSYWQHLGTFLRETMLEV
                     GTISESDMDLALVTDKVDEAVNYIKHKIADQLPSKDENEDVY"
BASE COUNT          950 a          825 c          831 g         1154 t
ORIGIN      
        1 aattcagtgc tgatcccgta tttcaagctc acgtgcgagt taagtgtgaa ggaggcaatg
       61 ctcgttgctt ttgcatttta catcagctac ttcgtcatgg cgatcccatc ctcattcatt
      121 cttaagaaga caggatacaa aaatggaatg atgttcggat tgttcgtgat ggctgcaggc
      181 gcactggtat ttcttcctgc tgcgagcaca agggcctatc caatttttct tctcggctta
      241 tttatcgaag cggcaggatt aacgcttttg caaactgccg caaatccata tataactatt
      301 ctcggcccta ttgaaagcgc tgcatcgaga ataagtataa tgggcgtgtg caacaaaact
      361 gcaggagcca ttgcaccatt gttgctggta ggagcgatcg taaaaaatcc ggatgagatc
      421 gaccaggtaa agacacaatt attgacgatg acacgaatac agcaggaaca cgttttagat
      481 gaattgtctg cccgtcttat catgccgtac attgtaatgg cggtcgtgct cgtgtgcctc
      541 ggccttacaa taaagcttgc ccatctgcca gatatcaatg atgaaacttc gaatgctttg
      601 cctccatctg taccaaaaga aaataaaagc ttactgcagc accggcatct cgtgctgggt
      661 gcaatagcaa ttttttgtgc ggttggtgta gaggtgcttg ctgtggattc gatcatcaat
      721 tatgcgcaat acaccggttt gtctttcaga gaagcaaaat atttcgctac ttatacgctt
      781 ctgttaatga tcgcgagtta ttgcataggc attttcacca ttcctaagct tattaaacaa
      841 agaaaggctt taatgctttc tgcattgatc ggcctccttt tcagcatcgt tgcaatatct
      901 attaagggcg ccggttcggt ttggtttatc gcatttcttg gtttgggtaa tgcattgtta
      961 tggcccgcca tttggccgct ttcattagaa ggccttggga aattaacgag cagagggtct
     1021 gctttactca taatgggtgt gattggtggc ggcctcttgc ctttgttata tggtgcgatc
     1081 agcgatgctg caaatccgcg gatcgcgtat gcggtgctga tccctttata tttgtttatc
     1141 ctgtatttct ctttatccgg ttacaaaagt tcttatcgct ctttgcgccc tgaacactga
     1201 ataaaagcag aatgctgtta atcggtaact tacacgaaag taatttatgc cggttgcact
     1261 cggcagctca caaggcaaat ggttgatgac agcaaccata ctcgcatcag cgatggcatt
     1321 tattgatggc actgccttaa acgttgctct tcctgcgcta caaaaaaatc ttaatgcatc
     1381 ggctgcggac ttgttctgga tattaaatgc ctacctgcta atgcttgcct cattgatact
     1441 gatcggcggt tcactgggcg acaaacttgg ccgcaaaaaa atatttatgt tggggatatt
     1501 gatcttcata gttggttccg ctgcatgcgg attcgcaaca actgtttttt atctaatcac
     1561 attcagggtt atacaaggaa tcggtggagc gctcatgata cccggaagcc ttgcacttat
     1621 ttcgtcctcc ataaatgaaa accaaagagg aaaagcgatc gggacatggt ctgcagctac
     1681 gacggcggtc acaatgggcg gcccgatcgt cggcggtgca ttagccgacg ccggtttatg
     1741 gcgttatatt tttttcatca atgttccgat cggtgtagcg gcgctgttaa ttcttttgcg
     1801 gtctgtgaag gaaacgagag atgaagactc cgatactgcg atcgattacg ctggagcgtt
     1861 cgttgttaca atcagccttg cactcctgac atatggattt ctgaagatcc cggcccgtgg
     1921 ttttaatgat gtgcaggtaa ttatctcgct cgctgccggc ggtgcattgt tgtctttttt
     1981 tattttgatt gaacggaaaa atcagcatcc gatgatgccg cttcacttat tctcaaatag
     2041 aaattttagt ggtacgaacc tgcttacatt ttttttgtat gccgcccttg gcggcggcat
     2101 actttttctt tcgttaaacc tcgtgcaagt gcagggctac agtcaattgc aatcagggct
     2161 aacgttcctg cctttcacaa ttttgatgat aaccatcact cgttttgcag gaagcctttc
     2221 cgatagatat gggccaagat ggttcctcgt gctcggcccg gcaattgtgg gcgtcgggct
     2281 gcttatttta tcttttgtaa aacaaacgca aggcccagcg gatttttgga gaagtttctt
     2341 cccgggtatt ttgatcttcg gtttgggcat ggcatttact gtttcgcccc ttacagcgac
     2401 ggtaatgggt tcgctgcagt ctcatttttc aggaacggcg tcaggcatca ataatgcggt
     2461 tacgcggata tcaaacgttt ttgcgaacgc tgtatttggt gcattagcag ttttgttttt
     2521 tactggcgca ttgcaaaagg aagtagatca tctgccgttc gatgtgaatg aaaagcagtt
     2581 gatcttaaaa caggcagcca atcttggaaa tgcaaaacct ccggcagaga tcagcgaaca
     2641 aaaagcaata attgaaaatg catttcacgc cagcttcatt tcatcttatc agaacataat
     2701 gcgcatttgc gctgcccttg cttttttagc agcggtcgtg gcatttttgt ttatcaggaa
     2761 catcagaaag ttgagagttg acagatgacg gttggcgaag gaagctcgca atctcctttc
     2821 atcagtcaac tgtcaactgt agtacgtttg acataacgtg ttgtgccatt aagatcgaac
     2881 acgaaaattc tgctaagcca gtttgctgcc ggaacatacg gcacccaccc cgccgtcatg
     2941 cccggcctgg accgggcatc tgctctaagt aacattagag accaatatat aaatctttcc
     3001 acccgggatt gaaatccgaa atcaatttct tcttccatca tcgattccat tttttcagtt
     3061 gcttttctct tgcgattgca tcctctattc tgccaaatgt ctcataataa acaaggttgt
     3121 tacaattata ttttgcggtg aatgactttg gataaacctt ggcatatatg ctctggaatt
     3181 cttgtaaaaa ggtcagaagt cacgccaatg tacaagactt cgtgatgcac atttgttaag
     3241 atatagactg tccctccata ttgcataaat taaagttagc agattcccgc cttcgcggga
     3301 aagacgtgcg gtcccgttca taaatcctgg acactatttt tactgcaagg atcgcaatca
     3361 tttgactcaa ctttaatagc acaatacact aacaatttct gttgtgctat tgattctaaa
     3421 ccgcagttta tttttctcgg tctgccttcg agactttgtg gttcaaatta ttagaaacca
     3481 ctaatagcgt taacaataat taatacacat cttcattttc gtctttggaa ggaagctgat
     3541 ctgcaatttt gtgcttaata tagtttactg cttcatccac cttatcggtt accaacgcaa
     3601 ggtccatgtc tgattctgaa atggtcccaa cttcgagcat cgtctctctc aaaaaagtac
     3661 cgaggtgctg ccaatagctt tttcctaaac aaacaacagg ccttggtgga agtttgccgg
     3721 tttggatcag ggtaagtact tcaaaaattt catccatagt
//
LOCUS       DASQJI010000509         2610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2519284,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000509 DASQJI010000000
VERSION     DASQJI010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2519284"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2610
                     /locus_tag="VEV83_13880"
     CDS             <1..>2610
                     /locus_tag="VEV83_13880"
                     /inference="COORDINATES: protein motif:HMM:NF014214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M36 family metallopeptidase"
                     /protein_id="HYK46261.1"
                     /translation="SIVPSTSAMDAVMKLMDAVNYKASRILEVRQQSQGTDNYTVFKR
                     NNSSLWDIPCRMVYYNDQHAKLLTPAWEVQMMDAYKTHYWVGYVDLATGNVIEKKDLI
                     IHCNFGGPVSDNDAATDLSSFSIYQNGGGENDLAAEHFSPQSTQTLPSNQYRVYDLPY
                     ESPIDPGSSHSISGKSGDILSSPDGWHKVANAAAYNYTHGNNVWAFQDPSPGPLGGVP
                     SADPTRTAYPTNTTGGVYPLVEPFVFDYPVNLNNEPDTYMMAAIVNLFYWNNLMHDVF
                     YYMGFDEASRNFQESNTFSTGTRGGSDALGGDEVLAQAQDGGGTNNANFLTLPDGTNG
                     QMQMYLWTASAPDSLVQISSSTSGVPSTGTKYLSIQGSFSTLPTANTNLYTNPVLNKQ
                     LAIVQKNDLSTVGSSSEGCSTGQQSIALPANNVNGKIAVIDRGNCSFVEKVFGAQLGG
                     AVGAIIVNNVDGPPLAMGGSDAPGNAISIPAVMISKADGQILKTQLSGGATIVGSLKR
                     DTPPAKKRDGDLDNGVMCHEYGHGISNRLTGGGTLLPLGGDEEGGEGWSDFVALYMTL
                     RNNDLKKANTKHPFGVLPTRSIGNYVTYQAYDGRGIREYPYSTDMNINPATFAYVKRP
                     DYSETHSVGFVWCSMLYELLQTFIDEYGMNDNVYEGANPTPDHNPPASAKGNNIATRL
                     VIEAMKLQPINPTFVEERDAILKADTLLYNGQHSCKIWAAFAKRGLGYSAVSGTNGLG
                     DETESFDVPFSCDPTQKRFHIVKTGPGKIQNNSLVSYMITVTNLYPQTLRNLVVKDTL
                     ASSLTLMKATGKPGVSGQILTWTLNLKANETKTFTISANLNSSSASTAQFGDDQEAGA
                     GNWTADVSATANWT"
BASE COUNT          759 a          554 c          645 g          652 t
ORIGIN      
        1 ttcgatcgtg ccgtctacaa gtgcaatgga cgctgtgatg aaattgatgg atgcggtaaa
       61 ctacaaagcg agccgcattc tcgaggtgag gcagcaatcg cagggtaccg ataattacac
      121 tgtgttcaaa cgcaacaact cttctctgtg ggacattcca tgccgaatgg tttattacaa
      181 tgatcaacat gcaaaactgt tgacgcctgc gtgggaagtg cagatgatgg acgcctacaa
      241 gacgcattat tgggtgggtt acgtagatct ggcaacggga aatgtgatcg aaaaaaagga
      301 tctcatcatt cattgcaatt ttggcggacc agtctctgat aatgatgctg caactgattt
      361 aagttcgttc tcgatttatc aaaatggtgg cggcgagaat gatcttgccg ctgaacactt
      421 cagtcctcaa tcgactcaaa cacttccttc aaatcaatat cgtgtatatg atctgccgta
      481 cgagagcccg atcgatcccg gctcatccca ttcgataagt ggaaaaagcg gcgacattct
      541 ttcttcgccg gatggatggc ataaagtggc taatgctgca gcgtacaatt acacacatgg
      601 taataatgtt tgggctttcc aggatccaag tccaggtccg cttggtggtg tgccaagtgc
      661 agatcctacg agaactgctt atcccacgaa cacgacggga ggagtttatc cacttgtcga
      721 gccatttgtt ttcgattatc ccgtgaactt gaacaatgaa ccggatactt acatgatggc
      781 tgctatcgtg aatttatttt actggaataa cctgatgcat gatgtgtttt attacatggg
      841 atttgatgaa gcgtcgcgaa attttcagga atcaaacaca tttagcaccg gtacacgcgg
      901 aggctccgac gcgttgggcg gcgatgaagt gttggcgcag gcacaggatg gcggaggaac
      961 taacaacgcc aacttcctca cattaccgga tggcacaaac ggacaaatgc aaatgtattt
     1021 gtggactgct tctgctccgg attcattagt gcagatcagt tcttccactt cgggtgttcc
     1081 atcaacaggc acaaaatatc tttcgataca gggttcgttc agtacgctgc caactgctaa
     1141 tacaaatctt tataccaatc ctgtcttgaa taagcagctg gcgatcgtgc aaaaaaatga
     1201 cctttcaaca gtaggttcat cgagtgaagg atgcagcact ggccagcaga gtatcgcatt
     1261 gcctgcgaat aatgtgaatg gaaaaattgc tgtgatcgac aggggtaact gttcatttgt
     1321 agaaaaagtt ttcggagcgc aattgggcgg cgcggtcggt gccataattg tcaataacgt
     1381 cgatgggcca ccacttgcaa tgggtggaag tgatgcacca ggaaatgcaa tttcaattcc
     1441 ggccgtgatg atcagcaaag cagacggaca aattttgaag acgcaattat caggaggtgc
     1501 aacgatcgtt ggttcgctga agagagatac accacctgca aaaaaacgcg acggtgatct
     1561 tgacaatggc gtgatgtgcc atgaatatgg acatggtatc tcaaacaggt taacgggcgg
     1621 aggtacattg cttccgttgg gtggcgatga agaaggaggc gaaggatgga gcgattttgt
     1681 tgcgctttac atgactttaa gaaataatga tctgaaaaaa gcaaacacga aacatccttt
     1741 tggtgtgctg ccaacaagaa gcatcggtaa ctacgtgacg taccaggcat acgatggaag
     1801 aggaattcgt gaatatccat attcgaccga tatgaatatt aaccccgcta cgtttgctta
     1861 tgtaaagcgt cctgattatt cagaaacaca ttcggtcggt tttgtctggt gctcgatgtt
     1921 gtatgagttg ttgcaaactt ttatcgatga atacggaatg aatgacaacg tatacgaagg
     1981 tgccaatcct acccctgatc ataatcctcc tgcatccgcg aaaggaaata atattgccac
     2041 aagactggtg atcgaagcaa tgaaacttca acccatcaat ccaacatttg tggaagaaag
     2101 agatgctata ttgaaagccg acacattgtt atataacggt cagcacagtt gcaagatctg
     2161 ggcagcgttt gccaaacgcg gtttgggtta ttcagccgtt tcgggaacga atggtttagg
     2221 tgacgaaact gaatcttttg atgtgccatt cagttgtgat ccgacacaaa agagatttca
     2281 tatcgtaaaa acggggccgg gaaaaattca gaacaattct ctcgtgagtt atatgatcac
     2341 ggttacaaac ttgtacccgc aaacgttgag aaacctcgtc gtaaaagata cgctcgcatc
     2401 atcgctcacg ctcatgaaag ctacaggcaa acctggggtt agcgggcaga tcctcacatg
     2461 gacgttgaac ttaaaggcaa acgaaacgaa aacgtttaca ataagtgcga accttaatag
     2521 ttcatcagca tccaccgcac agttcggcga cgaccaggaa gcgggtgcag gaaactggac
     2581 tgcagatgta agtgcaacgg caaactggac
//
LOCUS       DASQJI010000510         5701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_215786,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000510 DASQJI010000000
VERSION     DASQJI010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215786"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2768
                     /locus_tag="VEV83_13885"
     CDS             <1..2768
                     /locus_tag="VEV83_13885"
                     /inference="COORDINATES: protein motif:HMM:NF039936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46262.1"
                     /translation="GYKFSFFEDSAFNDSLVISNYGTSFEDSIYVQFNPTDSVSYTGD
                     CPISGGGVPNGRLPLAGIGIDSRPTLTAQVTNVSCFMAKDGSIDIVRHGGDGPYSYCW
                     TNTGNFKDSAQDISSLSPSTYTVTVTSYAGCKMSESYVVTQPDPLIVTVVVDSMLCRN
                     GTTTVHVTASGGTRPYDGTGNFVVGYGKQTFTVTDGHGCTDSESIYVNNGTGVPPAKP
                     DPITSIVADATGVCGGGNFTYSVSPVINATSYTWLPPPNCSINSISIDGTQLVLTVPP
                     DFTADSLSVTANNGCGSSVPQKKYITTLPGKPGTISGPTTVSPLQTAVTYSVSQVGSL
                     TYVWTVPPGATITTGQNTSAITVNWGNSPGNVTVKAINSCGSSVANSFLNVTILGNTL
                     VASVGTLPAFDSICINGISTSKYFNLAGSGLDGSNVVVKAVPGFKVSATNYGTYGDSL
                     VIKNYGTSIKQNVYVKFNPIIAGSYDGNITTSGGGASATFVGVSGEAVNSSPALSANV
                     TNISCHGASDGGIDLSLKGGSGPFTYRWLGPGSYDSSAQDINGLGPSDYTVTVTSLLG
                     CKTSATYTVTQPDALILNLTADNMICKGTTTVVHVKAAGGTAPYSGTGDFVVSAARLP
                     FTVIDAHGCSQTQYITVPNGTLVAPNKPGPITGAYADSIGLCGGGQFKYRIDTVPTAT
                     SYMWIPPANCSIGSLNGYGNQLVLIVPPDFVADTLRVTASNVCGMSVPQAKTLLAIPA
                     KPGAISGPTSLTANQTGVVYSVKKPSAVRFNWKVPRDAQIISGQGSGSIVVNWGTLSG
                     NVMVRAKNDCGTSTYASTLSVAVAGAIAAQQEPQSVSSVSDDVIALPNPASNIVHISF
                     AASEIYNYTIFLSDINGKVVAEKTGITVKGENLVSFNVRNYANGIYLVTVMKENGEAT
                     RIKLLKD"
     gene            2938..4881
                     /locus_tag="VEV83_13890"
     CDS             2938..4881
                     /locus_tag="VEV83_13890"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46263.1"
                     /translation="MLKSTLLSKAISIRLLLLIALKLVLSVQTANAQDIAGEVTQGVV
                     WHGQNATQVTLGQIMERQAYLEKNHLIPKYKDRRVEGNEKEYLKQKFDNPNSPKVASY
                     KSDELVEQTQKAQGTYNISLAFDAVMHSDITQGWLPPDPMVACGPKQLAVTVNGRIRI
                     FSKTGNMLSDINADVFFSSVVHNSNAVDPRVRYDVTAQRWIFSAITIHGSNNYILLAI
                     SNEAVLTNRTKFNIVGFQQNMVGPSPNADDGLFADYETLGVDAKAIYIGCNMFNSGSH
                     TSVWVVNKADLIAGTLTVTAFRNIGSGTAGGPWTPQGVSNSNPSATEGYFIGTDYNTT
                     GLLVVRRITDPGGTPAISGNLNITVPSTAYPQSVPNMNGCGLPAIDGRLMLATMERDT
                     ATGKYTLWCSHTSTVNSSGVGTSSGDRDGVRWYQIGKLAATPTLLQSGTLYDNTASKY
                     FYWMGTIAMNTRGDALISCSVSSTTIGANGAVAVHFSTDAKGSTSAAQSTTNNTSSGY
                     CGGRWGDYSSAVVDPADGTTLWACHEYITNGDYVVRVAKIVVTPAPQPNIAASGNQAS
                     TWLASVSPNPATNKLNVIITGSVNERMRVSITNLYGVMISEKEIEKGLTSFSQDISGL
                     HSGFYFITLSTATTTQSLQFQKK"
     gene            4970..>5701
                     /locus_tag="VEV83_13895"
     CDS             4970..>5701
                     /locus_tag="VEV83_13895"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HYK46264.1"
                     /translation="MVYRVIGLMSGSSLDGLDIVFAELEESRASWTYSIKAAACYDYD
                     INWKQKLQSAKNLPAHEYLLLHVHYGKYLAESVNAFIKQNDLHHQVQLISSHGHTVFH
                     EPRRNMTAQLGDGATIAALTGINVVDQLRAMDVALGGQGAPIVPLGEKLLFPGFDCYL
                     NVGGIANISVSNAQHLTAFDVCPANRVLNMLAQDSGKEFDEGGRMAASGHIETQLLNE
                     LNDLDYYKQPYPKSLSNDLGTDVVHP"
BASE COUNT         1552 a         1310 c         1405 g         1434 t
ORIGIN      
        1 ccggatacaa attctctttt ttcgaagaca gtgcattcaa cgactcgtta gtgatcagta
       61 actatggtac gtcattcgag gattcgatat atgttcaatt caatccaacc gactctgttt
      121 cttataccgg tgattgcccc atatcaggag gcggtgttcc gaatggacga ttgcctcttg
      181 ccggaattgg catcgacagc aggccgactc ttacagcgca agtgacaaat gtgagctgct
      241 tcatggcaaa agatggttcc atcgacatag taaggcatgg aggcgatggt ccttacagct
      301 attgctggac taatactggt aatttcaaag attctgctca ggatatcagc agcctgtcgc
      361 cgtccacgta cactgttaca gtgacttcgt atgccggttg caagatgagc gaaagctatg
      421 tggtaacgca acccgatccg ttgatcgtta ctgtcgtcgt agatagtatg ctgtgcagaa
      481 acggtaccac taccgtgcat gtgacagctt caggtggcac gcggccatat gacgggacgg
      541 gcaattttgt tgtcggttac ggaaagcaaa cgtttactgt gaccgacggg catggttgca
      601 ctgatagtga gtccatctat gtaaataatg gtacaggtgt tcctccggca aaaccggatc
      661 ccattacgag cattgttgct gatgcgaccg gtgtgtgcgg cggcggtaat tttacttatt
      721 cggtaagccc tgttattaac gccacttctt acacctggtt acctccaccc aattgcagca
      781 taaattcgat aagcattgac gggacgcagc tcgtactgac ggtgccgcca gacttcacgg
      841 cggattcact ttcggtgaca gcgaataacg gttgtggaag cagcgtacct caaaagaaat
      901 acatcaccac attgcccgga aagcccggca caatctccgg cccaacaaca gtctcccctt
      961 tacaaacagc tgtaacatat tcagtgtcgc aggttggcag tcttacatat gtgtggacgg
     1021 tacctcccgg tgccacaatc acaaccggac aaaacacatc cgctattacc gtaaattggg
     1081 gcaattcacc gggcaacgtc accgtgaagg ccatcaatag ctgcggcagc agcgtggcca
     1141 attcttttct gaacgtgact atcctgggca atacacttgt tgcctctgtt ggaaccttac
     1201 ctgcatttga ctcgatttgc attaatggaa taagcacatc aaagtatttt aatttggctg
     1261 gctcaggtct ggatggatca aacgttgtcg tgaaagcggt gccgggcttc aaagtgtcag
     1321 cgacgaatta cggaacatac ggcgattcgc ttgtcatcaa aaactatgga acctcgatca
     1381 aacaaaatgt gtatgtgaaa tttaatccca taatcgccgg atcgtacgac ggtaatataa
     1441 ctacaagcgg gggcggagca agcgctactt tcgtgggtgt tagtggcgag gcggttaaca
     1501 gcagcccggc tctatcagcc aacgttacca atatcagttg ccatggcgcc agcgatggag
     1561 ggatcgatct ttctcttaag ggaggtagtg gcccctttac ttatcgatgg cttggcccgg
     1621 gttcttatga ttcttctgca caagacatca acggactcgg tccttcggat tacacggtta
     1681 cagttacttc cctcctcggt tgcaaaacgt cagcaactta tacggtgact cagccagatg
     1741 ccttgatctt gaatctcacc gcagacaata tgatctgtaa gggaacgacg acggtggtac
     1801 acgtaaaggc tgcgggtggt actgctcctt attcaggaac cggcgatttt gtagtgagcg
     1861 cggcccggct accatttacc gtgatagacg ctcacggatg ttcacaaacg caatacataa
     1921 cggttcctaa cggcacttta gttgcgccta acaaacccgg acctatcaca ggcgcttatg
     1981 cggattcaat cggtttgtgc ggtggcggac aatttaaata tcgaatcgat acggtgccga
     2041 ccgcgacatc atacatgtgg ataccgcccg cgaattgcag tattggttca ctgaatggct
     2101 acggcaatca actggtgctg atagtgccgc ccgattttgt agcggacacg ctgagagtga
     2161 ctgcaagtaa cgtgtgcggc atgagtgtgc cgcaagcaaa aacactcctc gcaattccag
     2221 caaagccggg cgcgatatcc ggccctacat cgcttacagc gaatcaaaca ggagtcgtgt
     2281 atagtgtaaa gaagccaagt gctgtaaggt ttaactggaa ggttccgaga gacgcgcaga
     2341 tcattagtgg ccagggttcg ggctctattg tggtaaattg gggtaccctc tccggaaatg
     2401 tgatggtcag ggcaaagaat gattgtggca catccacgta tgcatctaca ttgagcgtgg
     2461 cagttgctgg tgcgatcgcc gctcaacaag agccgcaatc tgtttcttct gtaagtgatg
     2521 atgtgatcgc gctgccaaat cctgcaagca acatcgttca catttcgttc gccgcgagcg
     2581 aaatctataa ctacacgatc ttcctgagcg acataaatgg aaaagttgtg gcagaaaaaa
     2641 ccggtataac cgtgaaaggt gagaacctcg taagctttaa tgtccggaat tatgcaaacg
     2701 gcatctacct ggttactgta atgaaagaaa atggcgaggc gacaagaatc aaattactga
     2761 aagactaaga atatctgatc cgacgcgatc aataaagttg cggtacagaa caacaacaaa
     2821 aaattcgcag gaagccatgc gcccgtatgg cttctttttt cgccatcgtt tgtgaaaata
     2881 aaatatcttt aattcacatt gatatcaaaa cgtaattcgc ttaccaaaaa cacgatcatg
     2941 ctaaaatcta ctctgttgtc aaaagcaatt tcgatcaggt tactcctatt aatcgcgctc
     3001 aagttggtgt tatccgtaca gactgcaaat gcgcaggaca ttgcaggcga agtaacgcag
     3061 ggcgttgtat ggcatggtca aaatgcgacg caggttacac ttgggcaaat aatggaacga
     3121 caagcatacc ttgagaaaaa tcatttaatt ccaaagtata aggaccgccg ggttgaagga
     3181 aatgaaaaag aatatctcaa acaaaaattc gataacccaa attcaccaaa agttgcttcg
     3241 tataaaagcg acgagttggt tgaacaaacg caaaaagcac aaggcactta taatatttcg
     3301 cttgcattcg atgctgtgat gcattcggat atcacccagg gctggcttcc cccagacccg
     3361 atggtcgcgt gtgggccgaa acaacttgcc gtcactgtta acgggcgaat tagaatattt
     3421 tcaaaaaccg gcaacatgtt gtctgatatc aatgccgacg tatttttttc atcggttgtg
     3481 cacaacagca atgcggtaga tccaagagta agatatgatg tgactgccca acgctggatc
     3541 ttttccgcta tcacgataca cggttcaaac aattatatcc tgctggcgat aagcaacgaa
     3601 gcagtattga caaacagaac gaaatttaat atcgtcggct ttcagcagaa catggtcggc
     3661 ccatctccaa acgctgacga cggcctgttc gcggattatg aaacattggg tgttgatgca
     3721 aaggcgatct atataggttg taacatgttc aactcaggtt cgcacacttc ggtttgggta
     3781 gtcaacaaag cagatcttat agcgggaaca cttacggtta cagcgtttcg taatattggt
     3841 agcggcaccg cgggtggtcc ctggacgccg caaggtgtat ccaattccaa tccttctgcg
     3901 acagagggtt atttcatcgg cactgattac aacaccactg gccttctcgt tgtccggcgc
     3961 attacagacc cgggtggaac tccggctatt tcaggcaact taaatatcac tgttccgagc
     4021 actgcttatc cgcaaagtgt tccgaacatg aatggatgcg ggttaccggc tatagacgga
     4081 agattgatgc ttgcgacaat ggaaagagat actgcgaccg gcaaatacac gttgtggtgc
     4141 tcacatacga gtacggtaaa ctcttcaggt gttggtacca gcagtggcga cagggatgga
     4201 gtgagatggt atcagattgg caagttggcg gcgacgccca ctttactgca atcgggcacg
     4261 ttgtacgata atacggcaag caaatatttt tactggatgg gcacgatcgc catgaacacc
     4321 aggggcgacg cgctaatttc atgttctgtg tcttcaacaa cgattggcgc aaacggcgct
     4381 gttgccgttc atttttccac ggacgcaaaa ggaagcacat ccgcagccca aagtactacg
     4441 aacaatacct catccggtta ttgcggcgga cgatggggcg attattcatc ggctgttgtt
     4501 gatcccgctg atggcacaac gttatgggct tgccatgagt acatcaccaa tggagactac
     4561 gtagtaagag ttgccaaaat agttgtcacc ccggcgcctc aaccaaacat cgcggcctcc
     4621 ggcaaccagg catcaacatg gctggcgagt gtttcaccta atccggccac aaacaagtta
     4681 aatgttatta taaccggttc ggtgaatgag cggatgcgtg tatcgatcac caatttgtat
     4741 ggtgtgatga tctctgaaaa agaaattgaa aaaggactta ccagcttttc gcaggacatc
     4801 agtggcctgc atagcgggtt ctattttata accttgtcaa ctgctacaac gacgcagtct
     4861 ttgcagttcc aaaagaagtg aaacgtaact tcagcgagca aagccgtttc atttgtgaga
     4921 cggctttttt gcgaatgcgc gaacattttg tattgcatat ttttgacaga tggtatacag
     4981 ggttattggt ttaatgagcg gttcatcgct tgacgggctg gatattgttt ttgcagaatt
     5041 ggaagagagc cgcgcgagtt ggacatactc gatcaaagca gcggcatgtt acgactacga
     5101 tatcaattgg aaacagaaac tgcaatcggc taagaatttg cctgcacacg aatatttgtt
     5161 gcttcacgtt cattatggaa aatatttagc agaaagtgtc aatgcattca tcaaacaaaa
     5221 tgatctgcat caccaggtgc aactaatatc ttctcacggg cacactgttt ttcacgaacc
     5281 gcgacggaat atgactgcgc aattgggaga cggcgccact attgcggcac taaccggaat
     5341 taatgtggtg gatcaattga gagcgatgga tgttgcactg ggcgggcaag gcgcacccat
     5401 cgtaccattg ggagaaaaat tgttattccc cgggtttgac tgttatctca atgttggggg
     5461 gatcgctaac atttccgtta gcaatgctca acatctcact gcgtttgatg tttgcccggc
     5521 taatcgtgtg ttgaacatgc ttgcacagga ttcaggtaaa gaatttgatg aaggtgggcg
     5581 gatggcggct agtggtcaca ttgaaaccca actgctgaat gaactgaatg accttgatta
     5641 ttataagcag ccatatccca aatctctttc gaacgatctt ggaactgatg tggtacatcc
     5701 g
//
LOCUS       DASQJI010000511         9339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_983371,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000511 DASQJI010000000
VERSION     DASQJI010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9339
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983371"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(327..713)
                     /gene="apaG"
                     /locus_tag="VEV83_13900"
     CDS             complement(327..713)
                     /gene="apaG"
                     /locus_tag="VEV83_13900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HYK46265.1"
                     /translation="MISKISEGVEISVESFYQADYSNPANNEFMFAYRITIENHNNFS
                     IKLLRRRWHIFDSNGEHRDVEGEGVVGVQPVLQSAKQFQYVSGCNLRSELGRMFGTYE
                     MENLNNKKVFEVKIPPFDLIAPLKMN"
     gene            complement(760..1308)
                     /locus_tag="VEV83_13905"
     CDS             complement(760..1308)
                     /locus_tag="VEV83_13905"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK46266.1"
                     /translation="MNKSFTEFPVLTTDRLRLRKLGHEDAQQVFLLRSDDSVNRYLDR
                     PKANSIEDAVLFIQKICGFIDNGQSFYWAIELKEDSKFVGTVTLFNFSEDHSCAEIGY
                     ELLPSFQGRGYMHEALQTVIAFAFETAGFTKIEAVTVPGNISSWRLLEKNNFWRDQKA
                     EQQCEADGKGNDMITYSRVKPG"
     gene            1534..2988
                     /locus_tag="VEV83_13910"
     CDS             1534..2988
                     /locus_tag="VEV83_13910"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HYK46267.1"
                     /translation="MRKIAIAKGDGIGPEIMDAVLKIFDAANVPLEYEVVEMGKWVFD
                     KGFNNGMTPEAKQTIEDLGILFKGPMETPKGKGVKSINVTARKTWNTYANTRTFQTLH
                     GVDTVFSKAGIPVDITVVRENIEDTYGGIEHMLTHDVALSRRFITRPGSMQVIKYAFE
                     MAKKKNARRITCAHKANIMKITDGLFMEVFYEVAKDYPELKADDVIVDDLCMKLVTRP
                     DTFDVIVLTNLQGDIVSDLCAGLVGGLGFAPSANIGDHICIFEAVHGTAPDIAGKNIA
                     NPTALLLSGIGMLRHLGLMESAVTIENALLYTLEQGLHTGDFGDKSKPAVNTTQFAEA
                     IINNFGKQPSQGAKSLLPDMPTTETHFRLEKNPMLESVETENERINGVDFFIESNEQP
                     LIIANKCLRHAGVKFKLINISNRGTQVWPTGSVYTNLVNQYNVRFESIDEIPLNQQDV
                     LGLYVSMSGNFKICSSELLLILGDKRAYSLAQGQ"
     gene            3289..3663
                     /locus_tag="VEV83_13915"
     CDS             3289..3663
                     /locus_tag="VEV83_13915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK46268.1"
                     /translation="MKQKEFDLEDRLVNFTCRMIDVVEALPKTRSGNYIAGQLIRSCH
                     SPTFNYGEVQAAESRSDFIHKMRVVLKELKECRTALKIIIKKEMIKPAKKLDNIFNET
                     HELIAIIAKGIETAAHNADKST"
     gene            complement(3796..4758)
                     /gene="lpxD"
                     /locus_tag="VEV83_13920"
     CDS             complement(3796..4758)
                     /gene="lpxD"
                     /locus_tag="VEV83_13920"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HYK46269.1"
                     /translation="MKFPTPVPVAWVAELIHAEIIGDDRSQAFGINEIHKVEEGDLCF
                     VDHPKYYSTCLNSAASHIIINTKDVDVPDGKNLLVVAEPFEAYLAIVNYFRPFHPTKS
                     LISETAIIGERTVVMPNVFIGKDVRIGTDCIIQPNVTIMDYTEIGNNVVIQSSTVIGS
                     DAFYYNTKKNRDVWYKKMQSCGNVIIEDDVEIGAGCTIDRGVTASTRIGRGTKIDNLV
                     HIGHDTDVGRNCLFAGQVGIAGATTIEDGVTLWGQVGVSKTLTIGENVTVYAQSGVAA
                     SLEGNKVYFGSPVVDAKEKKKELVWIRRIPEIWEKLQELMEKRS"
     gene            5044..5640
                     /locus_tag="VEV83_13925"
     CDS             5044..5640
                     /locus_tag="VEV83_13925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HYK46270.1"
                     /translation="MFRYFIVYKPYQTLSQFSGVPGKKTLADFFDVPGDIYPVGRLDE
                     DSEGMLILTNDSKLNHRLLNPSFEHEREYWVQVEGDITDDAIKQMQQGLQLIIKGKAH
                     NTKPSVVTKFDPAPHVEPRTPPVRYRASIPTSWIKIILREGKNRQVRKMTAKVGFPTL
                     RLIRYCIENITLGNMKPGSMIEVSKKTIYKKLFHEPNA"
     gene            5624..6100
                     /locus_tag="VEV83_13930"
     CDS             5624..6100
                     /locus_tag="VEV83_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK46271.1"
                     /translation="MNRTHEVSDGPYHVSTDISKLDVNIIHKYLSEESYWAKGIPKDV
                     VEKAIRNSICFGLYHNAEQIGFARVVTDKATFAYVADVFVLPAHRGKGLSKWLMQTIQ
                     ADPELQNLRRWILTTKDAHSLYEQCGWTRVPEDYMYRFMMRHDPDVYKKRAASGEL"
     gene            complement(6203..7318)
                     /gene="dnaN"
                     /locus_tag="VEV83_13935"
     CDS             complement(6203..7318)
                     /gene="dnaN"
                     /locus_tag="VEV83_13935"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HYK46272.1"
                     /translation="MKFIVSSSALLKHLQQISGVINANTVLPILEDFLFEIEDKKLTV
                     AATDLETVMSVQMDVESKANGKICIPARILVDSLKNISDQPLTFNIDKNFTVEITSDN
                     GKYKVMGENPDNFPKAPAADEANSFTVNSSALLNGINKTLFAVSNDDLRPAMTGVFFE
                     LSANALQFVATDAHRLVRYKRTDASCPKADTFIVPKKPLSLLKNVLPDNEDELNVSYN
                     SNHFFVTHDSTRLSCRLIDARFPDYKVVIPVDNPYKLTVNKNDFQSALRRVSIFSNKS
                     TNQVVLSITGSELQLAAQDVDFSFEGNERMNCQYDGEDLQIAFNAKFLIELLNASDSE
                     EVNIELSTPNKAGIVKPSEQDANEELLMLVMPLMLNT"
     gene            7573..>9339
                     /locus_tag="VEV83_13940"
     CDS             7573..>9339
                     /locus_tag="VEV83_13940"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HYK46273.1"
                     /translation="MKKISWVLIFLPAYLHAQLTVETIMQDPKWIGTSPSGIVWSYDS
                     KSIYFRWNPEKNSSDSPYNYVLAANKISKAPYSTGKMADDIAAGKYNRLKTKICFTHN
                     KDIYLLDKSSAKISRVTQTAAEESNPVFMSDDNIIVYTSNNNLFAWNSASGETKQLTN
                     LIKGSAPPDEKNASEQQEWLKRQALQTSSVINRRTQKADSSKAFLDRNKEEKDLRKIY
                     TGASEVQNITVSPDERFVTYRLYQKNDDVQGTIVPAYVTREGYTKDIASRSKAGRPDG
                     KYSSFVFDRLKDTVLQIITDSIPGLADEPQYLKEYPAKSKDSIKQPRKVYIEGPYWND
                     DGSTAVVDVFSLDNKDRWIMQLDATTAKLSLLDRQHDEAWIAGPGIAWLEPAKLGWLN
                     ANTFYFQSEATGYSHLYAYNIKTHTRTAITQGKYEIQNAVLSPDKKHFFILTNEENPG
                     KQNIYRIDVDGTNKIKLTSFTGGYEMFLSPDEKFVAYRYSYQNKPWELYVQSTEVGSR
                     PVHVTDKAMSDAFKAYAWRDAKIVTFTARDGAQVYARVYEPKAGTKNNAAVIFVHGAG
                     YLQNVDYWWSYYFREMMFNNLLA"
BASE COUNT         2709 a         1984 c         2125 g         2521 t
ORIGIN      
        1 gggatttctc ggacaatttg ttggatggca gatcgtaaaa aaatggatgg ctgaacatga
       61 taaaacgacg ttgcctcagt tgatcaatac cccggaaaaa cagatctatg acgaagccaa
      121 gtataaaccg aggtagtttg aagtttgagg tttgaggaat tggtttattg ggatactggt
      181 ttattgggat attaggctat ttgggtatta ggataatttc ttctttgcga taagcattta
      241 aacatttagc tcgcagattt aaaaaaatcg cgtggaccag caacagccat tgaccattca
      301 caattcacca ttcaccattc acaatatcag ttcatcttta gcggggcgat caaatcgaag
      361 ggcgggatct tcacttcgaa aacttttttg ttgttgaggt tttccatttc ataagtgccg
      421 aacatacggc cgagttcact gcggagatta cagccgctca catattgaaa ttgttttgcc
      481 gattgcagaa cgggttgcac accaacgacg ccttctcctt ccacgtcgcg atgttcgcca
      541 ttgctgtcaa agatgtgcca ccggcggcgc agtaatttta tgctaaagtt gttgtgattc
      601 tcgatggtga tacggtaagc aaacatgaac tcattgttgg ctggattgct gtaatcggcc
      661 tggtaaaagc tttcaacgct tatctctacg ccttcagata ttttagagat catttcaatc
      721 gtttgctgca ataaagatat gaaattgaaa acatatctac tatcctggct ttacacgtga
      781 ataagttatc atatcgtttc ccttgccgtc agcttcgcat tgctgttcgg ctttttgatc
      841 cctccaaaaa ttattttttt caagtaacct ccacgacgaa atgtttccag gaaccgtaac
      901 ggcctcgatc ttcgtaaagc ctgccgtttc aaacgcgaat gcaattaccg tttgcaatgc
      961 ttcatgcata taacctcttc cctggaatga tggcagcaat tcgtaaccga tctcggcgca
     1021 actgtggtct tctgaaaaat taaacaaggt aaccgtacct acaaattttg aatcttcttt
     1081 caattcaata gcccaataga acgattgccc gttatcgata aaaccgcaga tcttttgtat
     1141 gaacagcacg gcatcttcta tcgagttagc tttcggacgg tcgagatacc ggttcaccga
     1201 gtcatcagac cgaagcagaa atacctgttg tgcatcttca tggccaagtt ttcttaaccg
     1261 caatcgatcc gttgtgagaa cgggaaattc ggtgaatgat ttattcatag tgtgaaaata
     1321 cttttttcgc atgttaccca caacggcaaa tcctgctgag tcatttcaag agttgaatgg
     1381 ctgcgggatg cggagggcat ggctctcccg cgacaggcgg gaagccgtag cgaagcgaag
     1441 cccgcagcag cccggacaat agttgagatg agcaccggtg ctgacagccc caaataaata
     1501 tttcactcat caacgtgcat attaaatttg cctatgcgaa aaatagcaat agcaaaaggg
     1561 gatggcattg gcccagaaat catggatgct gtcctcaaaa tttttgacgc agcaaatgtt
     1621 ccgctcgaat acgaagttgt tgaaatgggc aagtgggtat ttgacaaagg tttcaacaac
     1681 gggatgacgc cggaagcgaa acaaacgatc gaagacctcg gcattttgtt caagggcccg
     1741 atggaaacac cgaaaggaaa aggcgtaaag agcattaacg ttactgcgcg taaaacatgg
     1801 aacacatacg cgaatacaag gacgtttcaa actctgcacg gcgttgacac ggtattcagc
     1861 aaagccggta ttccggttga catcacggtt gtgcgtgaga acatcgaaga cacctacggc
     1921 ggcatcgagc acatgcttac tcatgatgtc gcgttgagcc ggagattcat tacgcggccg
     1981 ggcagtatgc aggttatcaa gtatgcgttt gaaatggcga aaaagaaaaa tgcgcggcgg
     2041 atcacatgtg cgcataaggc caacatcatg aagatcaccg acggattgtt tatggaagtg
     2101 ttttatgaag tagcgaaaga ttatcctgaa ttgaaagcag acgacgtgat cgtcgatgac
     2161 ctgtgcatga agcttgttac gaggccggat actttcgatg tgatagtgct cacaaacctg
     2221 cagggagata ttgtgagtga tctctgcgcg ggcctcgtgg gaggattggg tttcgcacca
     2281 tcggcaaaca tcggtgatca catatgcata tttgaagcag tacatggtac ggcgccggac
     2341 atagcaggaa aaaatatcgc taatcccacg gcgctgttgc tgagtggcat aggtatgttg
     2401 cgacatttgg gtttgatgga aagcgcggta acaatagaga atgcattatt gtatactttg
     2461 gagcagggtc ttcatacagg tgattttggc gacaagagta aacctgctgt caataccacc
     2521 caatttgcag aggcaatcat taataatttc gggaaacaac cgagccaggg tgcaaaatct
     2581 ctgttacccg atatgccgac tacggaaact cacttcaggc tcgagaaaaa tccaatgctc
     2641 gaatcggtgg aaactgaaaa cgaaaggatc aacggcgttg atttttttat tgagagcaat
     2701 gaacagccgc tcatcatcgc gaataaatgt ttgcgacacg ccggtgtaaa atttaaactc
     2761 atcaacatta gcaaccgagg cacccaggtc tggcccacag gctctgttta caccaatctg
     2821 gttaatcaat ataatgtgcg ttttgaaagc attgatgaaa ttccattgaa ccagcaggat
     2881 gtgctgggtt tgtatgtgag catgagcggc aattttaaaa tttgctcttc agagttgctg
     2941 ctgatccttg gtgataagcg tgcgtatagt ttggcacaag gtcaatgagg tttgaggttt
     3001 gaggtttgag gttggttaat tggttaattg gttaatgggt taattgggga aatggttgat
     3061 tgggtgttca agttgtgact ttggtaaggt ttgaggtctg aaggttaatg ctcaatgttc
     3121 aatgctcaat gaccaatgtt cattgcatac gtttcgaatc acggaatgga cgccgttcct
     3181 aatgaaaagg aaaattttgg cgactgcgca ttccccgagc gctaaaaagg caagggaaac
     3241 tgtgagaaga aataagtaac ttgtcgagac ctcaccaaaa cccttcttat gaaacaaaaa
     3301 gagtttgatc tcgaagatcg gctcgtcaat tttacttgtc gtatgattga tgttgtagag
     3361 gccctgccaa agacacggtc gggaaattac atcgccggcc aactcatcag atcatgtcat
     3421 tcaccgacgt tcaattatgg cgaagtgcag gcggctgaaa gcaggagtga ttttattcac
     3481 aagatgagag tggttctaaa agaactgaaa gaatgccgga ccgcgttaaa gattattatt
     3541 aaaaaagaga tgatcaaacc tgctaaaaag cttgacaata tctttaacga gacccacgag
     3601 ctaattgcaa taatagccaa aggcatagaa acggcagcgc acaacgcgga taagtcaacc
     3661 taataaattg aataggatgt tgaaaaatct ccatgacctc aattgaatat tgagaattga
     3721 acattcagaa ctggattgaa cattcagaat attcagaatt gaacactgga tgaatttgat
     3781 catgaaccaa aatactcaag atcttttctc catcaactcc tgcagtttct cccagatctc
     3841 cggtatgcgc ctgatccata ccagctcttt ctttttttcc tttgcatcaa ctacaggaga
     3901 accgaaataa actttgttgc cttcgagtga agcagccacg ccgctttgtg cgtacacggt
     3961 tacgttctcg ccgatcgtaa gcgtcttgct cacgccaacc tgtccccaca gtgttactcc
     4021 atcttcaatg gttgttgctc ctgcaatgcc aacctggcct gcaaacaaac aattgcgccc
     4081 gacatcagtg tcatgaccta tgtgcacgag attgtcgatc ttcgttcccc ttccaatgcg
     4141 cgttgaagcc gtaacgccgc gatcgattgt gcagccagca cctatctcaa catcatcctc
     4201 aattataaca ttgccgcaac tctgcatttt tttgtaccac acgtcacgat tctttttcgt
     4261 attgtaataa aaagcatcac tgccaatcac agtggaagac tggatcacta cattattacc
     4321 gatctctgtg taatccatta tggtgacatt cggctgaatg atgcagtcgg tgcctattct
     4381 cacatctttt ccgataaaca cgttcggcat caccactgtt cgttcaccta tgatcgcggt
     4441 ttcgcttatc aagctttttg tcggatgaaa cggcctgaaa taatttacga tcgccaggta
     4501 agcttcgaat ggctcagcga ccaccagcag gtttttcccg tcgggcacat caacatcttt
     4561 ggtattgatg ataatgtgag aagcagcgct gttcaaacac gtgctgtaat atttcgggtg
     4621 atctacaaaa cacaggtcac cttcttccac tttatgaatt tcgtttatac caaatgcctg
     4681 cgatctgtca tcgccgatta tttccgcatg gatcaattca gcgacccagg caacaggaac
     4741 cggtgttgga aatttcatgt ataaaaattt ttgagtggag caaagttaag cggttgttga
     4801 ctgctgattt ttttcgatcg ggacgatcaa tgcgattcaa atttgttcga cgcgttcatt
     4861 caaatcatat tttttgatca tgcaatccac ataagaaaaa aaaattgtgc ataaaattgt
     4921 ttgaaaaatt ttttgtgtaa gagaaaagta tttttaatat tgtgtcggga aattttattt
     4981 cccagttact tactaaccca tctatataca aagtcccgct tcagcgggat tttttttggc
     5041 tgtatgtttc gttactttat tgtatataaa ccgtaccaaa cgctgtccca gttttccgga
     5101 gttcccggaa aaaaaacgct cgcagatttt tttgatgtgc ccggcgacat ctatccggtc
     5161 ggcagacttg atgaagacag tgagggcatg ttgatcttaa cgaatgattc aaaactgaat
     5221 catcgattac tgaatccatc attcgaacat gaaagagaat attgggtcca ggtggaagga
     5281 gacatcaccg atgatgctat aaagcagatg cagcagggat tacagcttat cataaaaggc
     5341 aaagcgcata acacaaaacc atctgtagtg acgaaatttg atccggcgcc acatgtagaa
     5401 ccgagaacac cgccggttcg ttacagggca tcgataccaa cgtcgtggat aaaaataatt
     5461 ttaagagaag gtaagaacag gcaggtgcga aaaatgactg cgaaagttgg ctttccaacg
     5521 ttacgattga tccgctactg tattgaaaat attacgctgg gaaacatgaa gcccggatcg
     5581 atgatcgagg tctcaaaaaa aacgatctat aaaaaacttt tccatgaacc gaacgcatga
     5641 agtgagcgac gggccatacc acgtcagcac agatatttct aaactcgatg ttaatattat
     5701 acataagtac ctgtctgaag aatcatattg ggcgaaagga attccaaaag atgttgtaga
     5761 aaaggcgatc cgcaactcca tttgctttgg gttgtatcat aacgcagaac agatcgggtt
     5821 tgcgagagtt gttaccgaca aagcaacgtt cgcctatgta gcagatgttt ttgttttgcc
     5881 ggctcatcgc ggcaagggtc tatccaaatg gttaatgcaa accatacagg ctgaccccga
     5941 attacaaaac ctgaggcgat ggatactcac cacaaaagat gcacacagtt tatatgaaca
     6001 atgtggatgg acacgagtgc ctgaagatta catgtacagg tttatgatga ggcacgatcc
     6061 ggatgtttat aagaaacgag ctgcgagcgg tgagctgtga gcttcgagct tcgagctgcc
     6121 agctacgagc tgcgaaagaa tccatgtgat aacttttttt gaagaagagc tcgtagccgg
     6181 aggctcggag ctcgcggctt cctcacgtat taagcatcaa cggcatgacg agcattagca
     6241 gctcttcgtt ggcgtcttgt tcggatggtt taacgatgcc ggctttatta ggagtagaaa
     6301 gttcgatatt cacttcttcg ctgtctgaag catttagtaa ttcgatcagg aattttgcat
     6361 tgaatgcgat ctgcaggtct tcgccatcat actggcaatt catccgctca ttaccttcaa
     6421 aactaaaatc aacatcctgc gcggcaagtt gcagctcact tcccgtgatg ctcaacacaa
     6481 cctggtttgt gcttttatta ctaaagatgc tcacccggcg aagtgcactt tgaaaatcat
     6541 ttttgttaac cgttagcttg tatggattgt ccacgggtat caccactttg taatcgggaa
     6601 agcgtgcgtc gatgagccgg cagcttaaac gcgttgaatc atgtgttaca aaaaaatgat
     6661 tgctgttgta gctaacgttt aactcgtctt cattatccgg cagtacattt ttcaacaggc
     6721 tcagcggttt tttcggaacg ataaaagtat ccgccttcgg gcagctcgca tctgttctct
     6781 tataacgaac cagccggtgt gcgtctgtgg caacaaattg caatgcgttt gcagacagtt
     6841 caaagaatac gcccgtcatc gctggccgaa gatcatcgtt gcttacagca aacaacgttt
     6901 tattaatacc attcagcaat gctgagctgt tcaccgtgaa actgttggct tcatctgccg
     6961 ccggcgcctt tggaaagttg tccgggtttt ctcccatcac tttatacttg ccgttatcac
     7021 tcgtgatctc aacggtaaag ttcttatcga tattaaaggt caacggttgg tccgaaatgt
     7081 tcttgagtga gtctactagg atgcgtgcag gaatacagat ctttccgttg gctttgcttt
     7141 caacatccat ctgcacactc attaccgtct cgaggtcggt agctgcaacc gtgagttttt
     7201 tgtcttctat ttcgaataaa aaatcttcaa gtatgggcag aacggtattc gcatttatta
     7261 cgccgctgat ttgctgtaaa tgttttaata aagcagaaga agaaacgatg aacttcattg
     7321 tactgtctta tttatgggat gatgcaatgc acctggtttc aaccaattaa tacccagccg
     7381 ggggcatgca ggcaaaccta agttaaaatg ttatataggg caagtttgat ttttctgcgt
     7441 ccgagggggt tcagcgaaat gtgaattgaa tgtgcttaaa ccactttaag agagcgatat
     7501 tcggcaattg ccggaaaaaa gaatgttgaa ctttcggttt atttgttttt tcaattgcac
     7561 taatttgtct caatgaaaaa gatatcctgg gtcttgatct ttctgcccgc atacctccat
     7621 gcacagttga cagttgaaac gatcatgcag gatccaaaat ggatcggcac ttcgccttcg
     7681 ggcattgtgt ggagttatga tagtaagtcg atctactttc gttggaaccc ggaaaaaaat
     7741 tcgagcgatt cgccgtacaa ttatgtttta gccgcgaaca agatctccaa ggcgccatac
     7801 tcaactggca agatggctga cgatattgcc gccggaaaat ataaccggct gaagacaaag
     7861 atctgcttta ctcacaataa agatatttat cttctggata aaagcagcgc gaagatcagc
     7921 cgggttacgc agactgctgc ggaagaaagt aacccggttt ttatgagcga tgacaatatc
     7981 atcgtttaca cctccaacaa caatcttttt gcctggaata gtgcttccgg cgaaacgaaa
     8041 caacttacga atttgattaa gggttctgcg ccgccagatg aaaaaaacgc ttcggaacag
     8101 caggaatggt taaagcggca ggctttgcaa acgtcatctg ttatcaatag gcgtactcaa
     8161 aaagctgact catctaaagc attcctcgat cgaaacaaag aagaaaaaga tctgcggaaa
     8221 atttataccg gcgccagcga agtacaaaat atcacggtca gccctgacga aagatttgtg
     8281 acgtatcgcc tgtatcaaaa aaatgacgat gtgcagggga cgattgttcc tgcttacgtg
     8341 accagagaag gttacacgaa agatattgcc tcaagaagta aagcggggag gccagacgga
     8401 aaatattcgt cttttgtttt cgaccggctg aaagacacgg ttctgcagat catcactgat
     8461 tcgatacctg gtcttgcaga cgaacctcaa tatttgaaag agtatcctgc caaaagtaaa
     8521 gacagcatta aacagccacg caaagtttat attgagggac cttattggaa cgacgacgga
     8581 agcactgcag ttgttgatgt attttctctt gataacaaag accggtggat catgcagctt
     8641 gatgcaacga cggcaaaact ttcattgctt gatcgtcagc acgacgaagc ctggatcgcg
     8701 ggtccgggca tcgcctggct ggaacctgca aagcttggat ggttaaatgc aaacaccttc
     8761 tattttcaaa gtgaagcaac gggttattca cacctctatg cttacaatat aaaaacacat
     8821 acacgcaccg cgatcactca aggaaagtac gagatacaga atgccgtgtt aagccccgac
     8881 aaaaagcatt tcttcatttt gacgaacgaa gagaatcctg gcaaacaaaa catttatcgc
     8941 atcgatgtag atggaaccaa caaaataaaa ctgacatcgt tcacaggcgg ctatgaaatg
     9001 tttttatcac ctgatgaaaa atttgttgcg taccggtact catatcaaaa taaaccctgg
     9061 gagctgtacg tgcaatcaac ggaggtaggc tcaagacctg tacacgtaac cgacaaggcg
     9121 atgagtgatg cgttcaaagc ctacgcatgg agagacgcaa agatcgtcac tttcaccgca
     9181 cgggatggag cgcaggtcta tgctcgggtg tatgaaccaa aagccggaac aaaaaacaat
     9241 gccgcagtaa tttttgtaca cggtgcgggt tatttgcaaa acgtagatta ttggtggagc
     9301 tattatttcc gggagatgat gttcaataac ctgttagcg
//
LOCUS       DASQJI010000512        15499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_369730,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000512 DASQJI010000000
VERSION     DASQJI010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15499
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369730"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VEV83_13945"
     CDS             complement(<1..953)
                     /locus_tag="VEV83_13945"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HYK46274.1"
                     /translation="MENLTEYDSNNSPLGAGDSKILCIGEALIDMICTDKGKTLSAGQ
                     NFLKKPGGAPTNVAAAIAALGGNVELAAKVGNDPFGKQLIEVMQSFGVSTKWMLQTND
                     HFTTFAFVSLMEDGERDFVFNRGADGELSRAEIEEIILDEFSIIHFGSATGFLPGPLQ
                     AAYQGLLQKALQKNIFISFDPNYRHLLFKNNTQTFIDQSWNFLESCNFFKVSDEEALL
                     ITGAVTLSDAVKIFLQKTNAVFAITLGKDGTMLGINQETVIIPSIHVRPVDTTGAGDA
                     FVGAVLYQLSTMQTNDLTNISFDNWKNVISNANKAGARTCE"
     gene            complement(1024..2379)
                     /locus_tag="VEV83_13950"
     CDS             complement(1024..2379)
                     /locus_tag="VEV83_13950"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46275.1"
                     /translation="MQFTKPRMTFSQIINMNFGFFGIQYSFGLQQTAINPLYSFLHAQ
                     PEQLPLLNLAGPMTGLLIQPLIGAMSDKTWHPRWGRRKPYFLTGAIGCSLCLFFFPFC
                     SALWMAVGLLWLLDASNNTAMEPYRAFIADKLPNEQRALGFLTQSFFTGLGITLANVS
                     IFVFQKLITGESKTSAGESGIPYWVYGSFFVGAVCSIGSVLWSVSKTPEIPPTDEELE
                     KLRAYKGGLLAPFKEIGSAIRHMPGTLWQLALVYLFQWYAMFCYFQFISFSIARSVWH
                     TTPDGDKHLYEQAVGWTGLVNGFYNVVTFLSAFALVWLAKKYTAKRVHVVCLALAAAS
                     LFIVPHIENKYFLFAPMIGFGIAWASMMGVPYIMVVGSIPKERYGVYMGIVNMMIVVP
                     MILQTLTFGYVYKNFLGDNPGNAISFAGACLLIASLATLRIKVVKPTEEEIAMPVAAG
                     H"
     gene            2473..3456
                     /locus_tag="VEV83_13955"
     CDS             2473..3456
                     /locus_tag="VEV83_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46276.1"
                     /translation="MISVYKRKRLEFITIVYWFLLLYIIAALVWWFIALEKQNVALFD
                     SKVHELNKNLISYKQQYNTILQDKKRKTSQYIGEGSTFLLVILVGALFVYRATRRQLM
                     LSRQQQNFMMAVTHELKTPIAIIKLNVETLEKRKLDEEKKLRLMETTLQETGRLNDLT
                     TNILVTSQLESGNYQPDKEEINLSTLIEETVSDFSMRYPQRIIEKDARSEIYITGEQL
                     LVQLLINNLLDNAIKYSPAEKPVGVHLHKHGHKVFLKVTDEGSGVPDDEKKQIFQKFY
                     RSGSETTRKAKGTGLGLYLCKRIAESHRAKISVANNHPSGSIFNVEFKTKV"
     gene            3453..4157
                     /locus_tag="VEV83_13960"
     CDS             3453..4157
                     /locus_tag="VEV83_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46277.1"
                     /translation="MRDAKANILLVEDETHLHETLKLNLEMEDYSVTSAFNGKEALSR
                     IGDEYFDLIVMDIMLPETDGLSVLEHLRLQNNDVPVLILSAKNSGHDRVLGLKKGADD
                     YLTKPFNLEELLLRVDKLIRKNKKITDKDSAFDTYSFDGNTIDFKGQQAILRDGQKVE
                     LSKKETMLLRLLIENKNLVVTREKILQSVWGYKVYPNTRTIDNFILSFRKYFESDSRN
                     PRHFHSVRGVGYKYTD"
     gene            complement(4154..5602)
                     /locus_tag="VEV83_13965"
     CDS             complement(4154..5602)
                     /locus_tag="VEV83_13965"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HYK46278.1"
                     /translation="MLVFIRNIFVVLIIVAGNYSVFAQQSSVQLPSLITNDDTKTSSA
                     ENLSIESILQHSMFVKVSTNKSKAFVGEPVLAVYKFYTSVHGQAVVTKQPEFTGCSVK
                     ELTFDDDPQSEIIKGETYSSYIIRKVQLTPLKSGFLSLGEASVDNYIELPSGSDPFVT
                     DNYNISVKNPATSIQVSELPEKNKPREFYGITGIFGIAASAASSTIPVGESGHLIVTI
                     KGSGNLDAVNKPEIIWPVNTEHFEGNDSQHVNKDEFPINGDKTFDIPFVGKHEGKVVI
                     PPIRFSFFNTSLKSYQTVSTDSIPITFTKALAKKDQFADVVNYDISNRRYLWIVPAIA
                     FTVALVGFISYKRGRMRVHEQLVAPVSTATPEPVFIEPPSYVQIKYRTDFSRYWQDLQ
                     NITDTKSFFSKVKDLLGKAIAERTDTRDHSDDILLSELKQKTENNQLYERTAALFDTC
                     NVNLYAPFETDADLHHYFIETKEIIEQLQAES"
     gene            5746..6879
                     /locus_tag="VEV83_13970"
     CDS             5746..6879
                     /locus_tag="VEV83_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HYK46279.1"
                     /translation="MAFSPLDTIIDFLEPVSGLPADSYKQTQLGRSAKIFTKSFPDIA
                     LADLIIVGCADSRGAGVRKSDNAGLDAIRKYFYQLFHWHTEVKLADVGNIKRGDTLED
                     TYAAMQEVIAELSEFGKKVVILGGTHDIMTAQYNVCVARQQIVEATCVDAFLDMDSES
                     SLPADNFLMKMFTGEPNFVRHYNHIGFQSYFVHPAMLETIDKLRFDCYRLGVVKEHLE
                     TMEPVIRNSHLFAFDLTAIQHSHAPANHVTPNGFTGEEACLLMQYAGMSSLASTIGIY
                     GYNPKQDLSDLTAKQISQMLWYLMDGIQRGKQESSLEKRENFNEFRLMFADFETLFLQ
                     SKKTHRWWMQLPDKTFVACSDEDYNTALNNEIPDRWLRAAERS"
     gene            7176..7691
                     /locus_tag="VEV83_13975"
     CDS             7176..7691
                     /locus_tag="VEV83_13975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46280.1"
                     /translation="MRKLTSSLFFGLAFCILSVSSCKKEQDSTPAAEYYVKFKLDGVD
                     KEYSEIASAVFTTTVPLHTCSMVGVKQISDTIYEGMQMWIASDTEIVANITYTDAIVL
                     GRPAASIAYNDGTGEQFSSVIAASSGVQAVITHMDDNTVTGTFSGTVVSYTDFTTSHV
                     VTGGQFHLPRF"
     gene            complement(7863..9692)
                     /gene="mutL"
                     /locus_tag="VEV83_13980"
     CDS             complement(7863..9692)
                     /gene="mutL"
                     /locus_tag="VEV83_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HYK46281.1"
                     /translation="MIDIITLLPDNIANQIAAGEVIQRPSSAVKELLENAVDAGADRI
                     QLFITDSGKTSIQVIDNGKGMSETDARMCFERHATSKIKNIEDLFQIRTMGFRGEALA
                     SIAAVAQVELKTRRPQDELGTFLEIENSGVRKHEPCACAFGTNICMKNLFFNVPARRN
                     FLKSNASEMRHIVDEFIHVALAFPTIFFSLTSNGQQVFYLEAASPKQRFLQLLGNQYN
                     TKLVPVKEATDYLDIDGFVGKPEAAKKTRGDQYFFVNNRFIRSAYLNHAVTSAFDALL
                     PKDSFPVYALYIDLDPSQVDINVHPTKQEIKFEDEKIIYAFVQAAVKHALAQFSVSPS
                     LDFSLNAGIMQTEAVTQPFTEEKRETVTASELYKRFSQKNQAHLIEPGDKGELRHWRD
                     FYGSANDGSQLTVERPETRIGIPGFENPQAPTVICQLLNTYIIASVNNGFLIIHQQHA
                     HERILFERYTNAIQGKQSTTQQTLFPVTLELSPSDSALLQELLPELQLLGYRIGPFGN
                     GSFIMQGVPADVLQGNEKHSVELLLEQFKHFSSELKFSKREKLIHCMARQQAVKAGQS
                     LTDKEMKTVTEELFQCETPSVAPNGNPVFVEFSDDQLLKMFGR"
     gene            9845..10030
                     /locus_tag="VEV83_13985"
     CDS             9845..10030
                     /locus_tag="VEV83_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46282.1"
                     /translation="MDKDNKNEQAKAGQNEKNTNRESDQQKLNVKNPFNENDNKVITP
                     QDVEGEQDFKEAQTERD"
     gene            complement(10033..10869)
                     /locus_tag="VEV83_13990"
     CDS             complement(10033..10869)
                     /locus_tag="VEV83_13990"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HYK46283.1"
                     /translation="MFQMFQLPFMVQAFAAAVITGVLLSYLGVHVVGRGIVFVDLALG
                     QISSLGVAFAAYIGKGLTSIPLIFTLAGALLMSFISIRDKRLKQEAIIGILYAFASAL
                     TVLLISKTPHGDSDIQEVLFGSILSVSWQQISLLGIVFGAIAILHLVFFKKFFSLTES
                     FESGDNHLVGIFNIWNFLFYISIGLAIVFAVKINGVIPVFSYLIIPAVSAILLTKNKF
                     GVLIIAFIISVIAGFVGLNFSFHYDFPAGSSIVAILGGIFILAAVYNIVSHIGNRTPK
                     TH"
     gene            complement(11010..11921)
                     /locus_tag="VEV83_13995"
     CDS             complement(11010..11921)
                     /locus_tag="VEV83_13995"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HYK46284.1"
                     /translation="MKTNMKKILIILAFTSVFFCAEAGTIKVVTTLTDLRSITELIGG
                     NKVSVTSIATGYQNPHFVDPKPSYIISLSNADLFVTVGLDLETGWSPQLLASSRNTKI
                     QKGAAGYVDASEGVGLLQVPTSANRAEGDIHIYGNPHYWLDPMNGKVIARNIANGLER
                     IDPSNKSTYEANLQAFYKNIDAKMQDWQAKMAPFKGTKVIAYHNEWVYFEKRFGLQIV
                     DFMEPKPGIPPTPSQLVKVINEVKSNNIKVIISSPYFTTSSSDVVVKQTGAKAVTLAT
                     SVGAFAPVKNYFDLFDYDIAQLTAALK"
     gene            complement(11945..13114)
                     /locus_tag="VEV83_14000"
     CDS             complement(11945..13114)
                     /locus_tag="VEV83_14000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46285.1"
                     /translation="MNFIRQSKNRIYIFLPVVGSLIATIGVAQDSSGVNPADSALLKQ
                     VEEQMNNNADQTSPPAQPRSSLSFNPDIGVIGDFQGSYISKGDKNFDMYLNETEISLQ
                     ATVDPYARADFFLSFGRDPQTGKYGATVEEGYVTTLSLPAKLQLKAGKFREAVGRINP
                     THPHALPFIDLPNAYVNLFGEEGLNDEGVSLSWLVPNNAFYQELVVQTTSGFSESPAF
                     ARSEGNHLVYLGHLKNFFTLSDNATLELGITGISGPNDSARTTNIASGDLTYKWKPVQ
                     MNTYRSLTWQSEFYYTHNNVKEDQAVNSIGLYSFLQYQLAKRWFLTGRYDYGQKPYNK
                     SIQEQAYSLTGGWYATEFSKIELEGKTTDDDIEPRFYQAWLRWIFVIGAHGAHQY"
     gene            complement(13180..13491)
                     /locus_tag="VEV83_14005"
     CDS             complement(13180..13491)
                     /locus_tag="VEV83_14005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46286.1"
                     /translation="MLKKFISLLLLIIFLSGAGGGQVIHSIFHKHPGFDYTQSSVSIS
                     SPRTFCNALQLILPEFSESVACGIPPAIIAEGNFFADVQPSISHYHFFKTSDRAPPVL
                     A"
     gene            13590..14081
                     /locus_tag="VEV83_14010"
     CDS             13590..14081
                     /locus_tag="VEV83_14010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46287.1"
                     /translation="MRTLLFCLLIPTFAHAQWPGYFYAFTVTDDAGKVITKNDKPYRL
                     IPVKPAAGDIMLDVLTCDDSATTRFYVGGYHGLSDTHWLEIIRASTKEKMTIEFPSAL
                     SGGTDRYYRNLFVGKLIFRPGSYRVKLPASDSAWDNLHEIHFCPDYGGVDSYWDVSEL
                     QAR"
     gene            complement(14135..14713)
                     /locus_tag="VEV83_14015"
     CDS             complement(14135..14713)
                     /locus_tag="VEV83_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYK46288.1"
                     /translation="MRKNRLEAFSDGVLAIIITIMVLELRVPEGANWQALKPLFPVFL
                     SYTLSFIFIGIYWNNHHHLMHVVKHISAGIMWANLNLLFWLSLIPFATGWMGENHFEP
                     FTVALYAVLMVFCGVSYNILQIVIEKCHKEDQRLASIMQRQRGKGIGSLFLYSAAVPL
                     AYVNAIISGALFVLVAVLWLIPDKRIEQLMAE"
     gene            complement(14759..>15499)
                     /locus_tag="VEV83_14020"
     CDS             complement(14759..>15499)
                     /locus_tag="VEV83_14020"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK46289.1"
                     /translation="IYAKAKIPSGLGAPEGDLLDRMKALGKLPLVHQPGERWTYGLNT
                     DLLGCIIEVISGMSLQDFLRKNIFAPLGMNDTWFNLPEDKFDRLATVYTEDSLQHVVL
                     WSKDHSGIDPDYPKYKKHYFSGGAGLSSTAYDYAIFLQMIMNGGIYNGRQILSRRVVA
                     MMLHPQLDSSFNGKNNFGLGFEIVSDKGAADGARNEGSFGWGGYFGTTYWCDPKEHLV
                     CLLMTQQTPDSHGDIEVKFEQLVYASLK"
BASE COUNT         4323 a         3425 c         3465 g         4286 t
ORIGIN      
        1 tattcacatg ttcttgcgcc agccttattg gcatttgaaa tcacgttttt ccagttatca
       61 aatgaaatgt tggtaaggtc atttgtttgc attgtgctga gttgataaag caccgcgccg
      121 acaaaagcat cgccggcgcc cgtcgtatct acgggcctca catgtatgct cggaatgata
      181 actgtctcct ggttaatgcc aagcatggtg ccatcttttc caagtgtgat ggcaaaaacc
      241 gcatttgttt tttgtaaaaa aatcttcacc gcatcgctca acgtaaccgc tccagtgatg
      301 agcaaggctt cctcatcact tactttaaag aagttgcaac tctccaggaa attccatgac
      361 tggtcaataa atgtttgggt gttgtttttg aaaagcaagt gccggtaatt gggatcgaag
      421 ctgatgaaaa tatttttctg taatgctttt tgtaacaatc cctggtatgc tgcctgtaac
      481 gggccgggca gaaatccggt ggctgaacca aaatgaataa tcgaaaactc atctaaaata
      541 atttcctcta tttctgcacg acttaactcg ccatcggctc cgcggttgaa aacaaagtcg
      601 cgctcgccgt cttccatcag tgatacaaat gcaaacgttg tgaaatgatc gttcgtttgc
      661 aacatccatt tggtagacac gccaaacgat tgcatcactt cgatgagttg cttaccgaat
      721 gggtcatttc caaccttggc cgcgagttct acattcccgc caagtgccgc gatggctgct
      781 gcaacatttg ttggcgcacc gccaggcttc ttcaaaaaat tttggccggc cgaaagtgtt
      841 ttgcctttgt cggtgcagat catatcgatc aatgcttcac cgatacagag aattttggaa
      901 tcccccgccc ctaaagggga gttgttggag tcgtattcgg taagattttc caatgctatt
      961 cttgtttaga ttttgccatc atcattcttt gatcattctc ttctcccttt agggcagggg
     1021 ctgctaatgc cccgccgcta ccggcattgc aatttcttcc tctgttggtt ttaccacttt
     1081 tatgcgcagc gttgcaagag aagcgatcaa taagcaagca cctgcaaaac ttatcgcgtt
     1141 gccaggattg tcgcccaaaa agtttttata tacataacca aaagtgagtg tttgcaagat
     1201 catcgggaca acgatcatca tgttcactat gcccatataa actccatagc gttcttttgg
     1261 tatgctgcct acaaccatga tataaggcac tcccatcatg ctcgcccatg cgatgccgaa
     1321 gccgatcatc ggcgcaaata aaaaatattt gttttcgata tgcggcacta tgaacaaaga
     1381 agcagcggct aaggcaaggc acacgacgtg cactcttttc gcagtgtatt tttttgcgag
     1441 ccacacgagg gcaaacgcag aaagaaaagt aaccacattg taaaagccat ttacgagacc
     1501 tgtccagccg acagcctgtt catataaatg tttgtcgccg tcgggtgtgg tatgccatac
     1561 ggaacgggca atactgaatg agataaactg aaaataacag aacatggcat accattgaaa
     1621 caaatatacg agagccaact gccacaacgt tccgggcata tgcctgattg ctgatccgat
     1681 ttccttaaag ggcgctagca gcccgccttt atatgcgcga agtttttcaa gctcttcatc
     1741 ggtaggcggg atctcgggtg ttttggaaac agaccaaagt accgacccta tagaacaaac
     1801 agcgccaaca aaaaaagatc cgtagaccca ataaggaata ccactttcgc ccgcagatgt
     1861 ttttgattcg cctgttatta gtttttgaaa aacaaatatg gaaacattgg ccagggtgat
     1921 accaagacct gtaaaaaaac tttgcgttag aaaaccgagt gcccgttgtt cattcggcag
     1981 cttgtctgcg atgaatgcgc ggtacggttc catggctgta ttgttggatg cgtctaacag
     2041 ccaaagcaaa ccaaccgcca tccacagtgc gctgcaaaac ggaaagaaaa acaaacataa
     2101 gctgcagcct atcgcaccgg tgagaaagta aggttttcgg cgtccccagc gcggatgcca
     2161 tgttttatcg ctcatagcac cgataagagg ctgaatcaac aggcccgtca tcggacctgc
     2221 gagatttaga aggggtaatt gctcgggctg ggcatgcaaa aatgaataaa gcgggttgat
     2281 agcggtttgc tgcaatccaa aactgtattg aataccaaaa aatccaaaat tcatgttgat
     2341 gatctggcta aacgtcatcc tcggttttgt aaactgcata agcacgcgtt gatcagttgt
     2401 taaatatatg gaaacatcca atattgcttt tagcaatagc aagaatgtat ttgtttattt
     2461 tgcaactatt gtatgatctc tgtttataaa agaaaaaggc tcgaattcat cacgattgtt
     2521 tattggttcc tgctactcta catcattgca gcactcgttt ggtggttcat cgcgcttgaa
     2581 aaacaaaacg tcgctttgtt tgattcaaaa gtgcacgagc ttaataaaaa tttgatctca
     2641 tacaagcagc aatacaacac catcttgcag gataaaaaaa ggaagacttc ccaatacatt
     2701 ggagaaggca gtactttttt actggtcata ctggtaggtg cattattcgt ttatcgcgct
     2761 acccgaagac aattgatgtt atcaaggcag caacaaaatt ttatgatggc ggtgacacat
     2821 gaattgaaaa caccaattgc cattataaaa ttgaatgtcg aaacgctgga aaaaaggaag
     2881 ctcgatgaag aaaaaaagtt gcggctgatg gaaacaacat tgcaggaaac aggcaggttg
     2941 aatgatctaa cgaccaacat ccttgttacg tcacaattgg agagcgggaa ttatcaaccc
     3001 gataaagaag aaatcaattt atcaacctta attgaagaga ctgtcagtga cttttcgatg
     3061 cgatacccac agaggatcat tgaaaaagat gcacgttcgg aaatttatat tacgggtgaa
     3121 cagttactgg tccagttgct cattaataat ctcctggata acgcaatcaa atactctcct
     3181 gccgaaaaac ctgtcggcgt acacctccac aaacacggcc acaaggtttt tctgaaagtg
     3241 accgatgaag ggagtggagt tccggacgac gaaaagaagc aaatttttca aaaattttac
     3301 cgcagcggta gcgaaacaac acgcaaagca aagggcacgg ggctgggatt atatctttgc
     3361 aagcgcattg ccgagagtca cagagcaaag atcagcgtag caaataacca tccgtccgga
     3421 agtattttca atgtagaatt caaaacgaaa gtatgagaga tgcgaaagca aatattctgc
     3481 tggtggaaga cgaaacacat cttcatgaaa cgctcaagct gaacctggag atggaagatt
     3541 attcggttac ttccgcattt aacggcaagg aagccctctc aagaataggc gacgaatatt
     3601 ttgacctgat cgttatggat attatgctgc ccgagacaga tggcctgagc gttttggaac
     3661 atttgcgatt gcagaacaac gatgtacccg ttctgatact tagcgcaaaa aattctggtc
     3721 atgacagggt gctgggattg aaaaaaggag ccgacgatta tctcaccaaa ccttttaacc
     3781 tcgaagaatt attgttgcgg gtagataagc tgatcagaaa aaataaaaag atcaccgata
     3841 aagattctgc gttcgacact tattcgtttg acggaaacac gatcgacttc aaaggacagc
     3901 aggcgatttt gagagatgga caaaaagtag agctcagcaa gaaagaaacg atgttgctca
     3961 gactactgat cgagaacaag aacctggtcg ttacgagaga aaagatctta cagtctgtgt
     4021 ggggttacaa agtatatccg aatacaagga cgatcgacaa ttttattctc agtttcagaa
     4081 aatattttga aagcgatagc cgtaatcccc ggcattttca ttccgtaaga ggcgtgggtt
     4141 acaaatacac cgactaactt tctgcctgca actgttctat gatctctttt gtttcaataa
     4201 agtaatgatg aagatccgca tcggtttcaa aaggcgcgta gaggttcaca ttacaggtgt
     4261 caaaaagcgc ggcagttcgc tcgtaaagct gattgttttc cgttttctgt ttgagttctg
     4321 acaaaagaat gtcatctgaa tgatcgcggg tatctgttct ttctgcgatc gctttgccga
     4381 gcaggtcctt cacttttgaa aaaaatgatt ttgtgtctgt tatattttgc aagtcttgcc
     4441 aatagcgcga gaaatctgtc cgatacttta tttgcacata tgaaggtggt tcaataaaga
     4501 caggctcagg cgttgcggtt gaaaccggtg cgaccaactg ctcatgaacg cgcatgcggc
     4561 ctcttttgta actgataaat ccaaccaacg caacggtgaa cgctattgca ggaacgatcc
     4621 acaaatatct cctgttgctt atatcataat ttactacatc ggcaaactgg tctttttttg
     4681 ccagcgcttt cgtgaaagtt attggaatgc tgtcagtaga aacggtttga taacttttta
     4741 gcgacgtgtt gaagaagcta aagcggattg gaggtatcac cactttacct tcatgtttac
     4801 ccacaaatgg aatgtcgaaa gttttatcgc cattgatcgg gaattcatct ttattcacat
     4861 gctgcgaatc gttgccttca aaatgttctg tgtttacggg ccaaattatt tccggtttgt
     4921 tcacagcatc caggttgcct gatcctttga tggtgacgat caggtggccg ctttcgccaa
     4981 caggaattgt gctgcttgct gcagaggctg caattccgaa aatgccggtg atgccataaa
     5041 actcgcgcgg tttattcttt tcgggcagct cacttacttg tattgatgta gcaggatttt
     5101 tcactgaaat attataatta tccgttacaa acggatcgga gccgctgggt agttcgatat
     5161 agttgtctac cgatgcctca cccagcgaaa gaaaacctga tttcaaaggt gtgagttgca
     5221 ccttgcgaat gatgtatgat gaatacgtct cgcctttaat gatctcagat tgcggatcgt
     5281 catcaaaagt cagttctttt acactgcaac ccgtaaattc cggctgcttt gttacaactg
     5341 cttgtccatg cactgaagtg taaaatttat acaccgcgag caccggctct cccacaaacg
     5401 ctttgctctt gttggtgctg acctttacaa acatgctgtg ctgaaggatg ctttcaatac
     5461 tgaggttttc ggctgaagaa gtttttgtat cgtcgtttgt tataagggaa gggagctgca
     5521 cggaagactg ctgcgcaaat acgctgtaat ttccagcaac tattatcaac accacgaaga
     5581 tatttctgat aaaaaccagc atctcttgca aagatagatt cgatcaactt ttcatacagg
     5641 cggccggggt taatatccgg ttaaaccaat tgataacata tgggaataaa atttcggcaa
     5701 tgctaaggtt ctattggtta tgtttgttac caactgaaaa atgcaatggc cttttcccca
     5761 ctcgacacca tcattgattt cttagagccg gtgagcggac tgcccgctga ctcgtacaaa
     5821 caaacccaat tgggccgctc agcaaaaata tttactaaaa gttttccgga tatcgctctt
     5881 gccgatctca ttatcgtcgg gtgcgcagac tcgcgcggtg ccggggttcg aaaatcggac
     5941 aatgcaggcc ttgacgccat ccgcaaatat ttctaccagc tttttcattg gcacaccgag
     6001 gtgaaactgg ccgatgttgg taatataaaa cgaggcgata ccctggaaga tacttatgct
     6061 gcgatgcagg aagtaatagc ggaattatct gaatttggca agaaggtagt tattctgggc
     6121 ggcacgcacg atatcatgac cgctcagtat aacgtttgtg tggcacggca gcagatcgtg
     6181 gaagcgacct gcgtggatgc gttcctcgat atggactcag aaagcagttt gccggccgat
     6241 aactttctta tgaagatgtt cacgggcgag ccaaactttg tgagacatta taatcacatc
     6301 gggtttcaaa gttatttcgt gcatccggcg atgctggaga cgatcgacaa gcttcggttt
     6361 gattgctatc gcctgggtgt tgttaaagaa cacctggaaa ccatggagcc cgtgatccgc
     6421 aattcacact tgtttgcgtt tgatctcact gctattcagc acagtcatgc accagcgaat
     6481 cacgttacac ctaatgggtt tactggtgaa gaagcgtgtt tgctgatgca gtatgccggc
     6541 atgagctcgc tcgcaagcac gatcggcatt tatggttaca atccaaaaca ggatctcagc
     6601 gatctgaccg caaaacagat cagccagatg ttgtggtatt taatggatgg aattcagaga
     6661 ggcaagcagg aatcttcgct cgaaaagcgt gaaaacttta acgagttccg actgatgttc
     6721 gccgactttg aaactttgtt tttacaaagc aaaaaaacac atcgatggtg gatgcaactg
     6781 cccgacaaaa cgtttgttgc atgtagcgat gaagactaca ataccgccct gaataatgag
     6841 atccctgata gatggttgag ggctgccgaa agaagctgat cgcccgatcc agggttcaga
     6901 ttttttttaa attcctcgca caacaaatac aaaccgctta attacattgt taatcttttg
     6961 tagtataaaa aaccgaaagc gtgcttgagt tgaaaataat tttttaaggg agaaagtttt
     7021 ggtacaatcc tgttactgtc gacaacgaca ctttttaaac ttgcgtcatt tgacgcaaag
     7081 ccgccagttg cagacgtggt aattttgtgt tgtttaagag aagaatcaac tcttcgaaat
     7141 ctatcttacg cacggttaaa taataaattt caacaatgag aaaattgacc tcatcactct
     7201 ttttcggctt ggcattttgt atcctttccg taagttcatg taagaaggaa caggatagca
     7261 cacccgctgc agagtactat gtaaaattta aactcgatgg cgtagacaaa gagtattccg
     7321 agatagcctc tgctgtcttc acaacaaccg ttccgttgca tacatgttca atggtcggcg
     7381 tgaagcagat cagtgacacg atttacgaag gcatgcagat gtggatagcc agcgacactg
     7441 agatagtggc taatattact tatactgacg caatagtgtt aggaagacct gcggcatcca
     7501 ttgcatataa cgatggaacc ggtgagcaat tcagttcggt tatagctgct tcatcgggcg
     7561 tgcaggctgt tattactcat atggacgata atactgtaac gggaactttt tcaggtaccg
     7621 tggtcagtta cacagacttc accacttctc atgtcgttac cgggggacag ttccatttgc
     7681 cgagatttta gcgacgtcat ttgcaatctt gatccgctct catcagtttt tacacactgt
     7741 gggattctaa tggcaagggc gttcgaaaat tcatttttca ttcataccat aagtgcgcag
     7801 aggttatcta agcatccctg cctatgtctt tatgtcggtc tttgagaaac cgtcctcgac
     7861 tttcatctcc caaacatctt cagcaactgg tcatcactaa attccacgaa cacagggtta
     7921 ccatttggcg cgactgacgg cgtttcgcat tgaaataatt cttcggtcac cgttttcatc
     7981 tctttatccg tcaaagattg tcctgccttt actgcctgtt gcctcgccat gcaatgaatt
     8041 aatttttctc gtttgctgaa cttaagctca ctgctgaaat gtttaaactg ttcgagcaat
     8101 agttctaccg aatgtttttc gttgccctgc aacacatccg ccggaacacc ctgcatgata
     8161 aaacttccgt taccgaacgg cccaatgcgg tagccaagca attgcaattc gggtagcaat
     8221 tcctgcaaca aggcgctgtc agaaggtgaa agctcaagcg tcaccgggaa tagggtttgt
     8281 tgagttgttg attgtttgcc ctgaatggcg ttcgtatatc tctcgaacaa aattctttcg
     8341 tgcgcatgtt gctgatgaat gatcaaaaag ccattgttaa cagatgcgat aatataagta
     8401 ttcaaaagtt gacaaatgac agttggcgct tgagggtttt caaaaccggg aataccgatc
     8461 cttgtctctg gtctctcaac tgtcaactgt gaaccatcat tcgcacttcc gtaaaaatct
     8521 ctccagtgtc ttaactctcc tttgtcccct ggctcgatca agtgcgcctg gtttttttgt
     8581 gaaaaccgtt tatacaattc agatgcggtt acggtctctc ttttttcctc tgtgaagggt
     8641 tgcgtaacag cttccgtttg catgatgccc gcattcaaac taaagtcaag ggacggcgaa
     8701 acgctgaatt gcgcgagtgc atgtttcacc gcagcctgaa caaacgcata aattattttt
     8761 tcatcctcaa attttatttc ctgcttggtc ggatgcacat taatatcgac ctgcgaagga
     8821 tcaaggtcaa tgtatagtgc ataaaccggg aagctgtctt tcggtagcaa cgcatcaaac
     8881 gcgctggtta cggcgtgatt gagataagcg cttcgaataa agcgattgtt cacaaaaaaa
     8941 tattggtcac cgcgtgtttt tttggccgcc tcgggtttgc ctacaaaacc gtcgatatcg
     9001 aggtagtcgg tggcctcttt cacagggacc agttttgtgt tgtactggtt tcctaataat
     9061 tgcaggaatc gttgtttcgg gctcgctgcc tcgagataga aaacctgttg gccgttactt
     9121 gtcagcgaga aaaagatggt agggaacgca agtgctacgt gaataaactc atcgacgata
     9181 tggcgcattt ccgaagcgtt gctcttcaaa aaattccggc gggcgggcac gttgaagaaa
     9241 agattcttca tgcaaatgtt tgtgccaaaa gcgcacgcgc acggctcgtg tttgcggacg
     9301 ccactgtttt caatttcaag aaatgttccg agctcgtcct gcggtcttcg tgttttcaat
     9361 tctacctgcg ccacagccgc gatcgacgcc aatgcctcgc cgcgaaatcc catggtccgg
     9421 atctggaaaa ggtcttcaat gtttttgatc ttgctcgtgg catgacgctc gaaacacatc
     9481 cgtgcgtcgg tctcgctcat gcctttgcca ttgtcgataa cctgtataga agtttttcct
     9541 gagtctgtta tgaaaagttg gatccggtct gcacctgcat cgaccgcgtt ttcgagtagt
     9601 tctttcactg cgctcgaagg ccgctgtatc acttcgccgg ctgcgatctg gttggctatg
     9661 ttgtcgggta ataaagtaat gatatcgatc acagttcctc tcttcctttc ggtaaaaata
     9721 gaattattgc agcaatgccg gtcaacatta atttgcagat aaacaccttg ttaacttgtc
     9781 aacttgctac cttcttcgcc caactctggc ttaattttta tcacagttaa agaaactgtt
     9841 tgttatggat aaggataata agaatgaaca agcgaaagct ggtcaaaacg aaaaaaacac
     9901 caatcgagaa agcgatcagc aaaagttaaa tgtgaaaaat cccttcaacg aaaacgacaa
     9961 taaggtaata acgccgcagg atgttgaagg cgaacaggac ttcaaagagg cgcaaactga
    10021 gagggattga cgctaatgtg tttttggtgt tcggttgcca atatgtgaga cgatattata
    10081 cacggcggcc aggataaaaa taccaccgag gatcgcgacg atcgaagagc ctgcaggaaa
    10141 gtcgtagtgg aatgaaaaat tcaatcccac aaagcctgcg ataacactta taatgaatgc
    10201 aattataagg acaccaaact tgttttttgt gagcagtatt gcggacaccg caggtataat
    10261 gaggtacgaa aagaccggga tcacgccatt gatcttaact gcaaaaacga ttgccagtcc
    10321 aatcgaaata taaaacagga aattccagat gttgaagatg ccgacaaggt gattgtcgcc
    10381 actctcaaac gactcagtaa gcgagaaaaa ttttttgaaa aaaacgagat gcaatattgc
    10441 aatggcccca aacactattc ccaataaaga gatctgctgc cagcttaccg agaggatgct
    10501 tccaaacaag acctcctgta tatccgaatc gccgtgtggc gtctttgaga tgagcaatac
    10561 agtgagggcc gaagcaaatg cgtagaggat gccgataatg gcttcctgtt tcaatcgctt
    10621 gtcgcggata cttatgaatg acatcaacag cgccccggcc aacgtgaaaa taagtggaat
    10681 ggaagtgagg ccttttccta tgtaagccgc gaatgcaacg ccgagcgaag aaatttgtcc
    10741 aagtgcgagg tcaacaaaca cgattcccct tcctaccacg tgaacaccca ggtacgataa
    10801 taaaactccc gtgataaccg ctgctgcaaa ggcttgcacc atgaacggca actgaaacat
    10861 ttgaaacatg aattctattt tttctgtgga ataatcgttg tttttgcttt gcagacttct
    10921 cgtttccaaa ccggaatgac aagtgtcttc gctcagaagg aaggcgtaat tgtcatcttg
    10981 acgtaaggag agatctgcaa tgcaatctat tatttcaacg ctgctgttag ctgtgctata
    11041 tcataatcaa acaaatcaaa ataattcttc acgggagcaa acgcgccgac agaagtagca
    11101 agcgttactg cttttgcgcc agtttgtttc accacgacat ccgatgatga cgttgtgaaa
    11161 taaggcgatg aaattattac tttaatgtta tttgatttta cttcattaat aacctttacc
    11221 agttgcgatg gggtgggagg gatgcctggt ttcggctcca taaaatcaac gatctgcagc
    11281 ccaaaacgtt tttcaaaata aacccattcg ttgtggtagg cgatgacttt tgtgcccttg
    11341 aacggggcca tctttgcctg ccagtcctgc atttttgcgt cgatgttctt ataaaatgcc
    11401 tgcaggtttg cttcgtatgt tgatttattc gacgggtcaa ttctttcgag gccgtttgca
    11461 atatttcgtg cgatcacttt accgttcatt ggatcaagcc aataatgcgg gtttccgtaa
    11521 atatgtatgt ctccttccgc ccggtttgca gaagtcggca cctgcagaag tccaacacct
    11581 tctgatgcgt ctacatagcc cgcggctccc ttttgaattt ttgtgtttcg cgaacttgca
    11641 agcaattgcg gtgaccaacc cgtttccagg tcgaggccta ccgttacaaa taaatcggcg
    11701 tttgacaagc tgatgatata gctcggcttc ggatctacaa aatgcgggtt ttggtacccg
    11761 gttgctatgg atgttacaga aactttatta ccgccgatca gctccgttat actcctcaga
    11821 tcggttaaag ttgtgaccac ttttatcgtg cccgcctcgg cgcaaaaaaa taccgaagtg
    11881 aatgcaagaa ttatcaggat ctttttcatg ttcgttttca ttttcaaatt ttcaaattga
    11941 tttattaata ctgatgtgct ccgtgagctc cgatcacaaa tatccaacgc aaccatgcct
    12001 ggtaaaatct gggttcgata tcatcgtccg ttgtctttcc ttcaagttcg atcttagaga
    12061 actctgtcgc ataccaaccg cccgtgagcg aataggcctg ctcctgtatc gatttattgt
    12121 aaggcttttg tccgtaatcg taccggccgg taagaaacca ccgctttgct aattgatatt
    12181 gcaggaaact atataagccg atcgaattca cggcctggtc ctctttgacg ttgttgtgcg
    12241 tataatagaa ttcgctttgc caggtgagag accgataagt gttcatttga acgggcttcc
    12301 acttatacgt gagatcaccg gacgcaatgt tggtcgtgcg cgccgagtca ttcggtcccg
    12361 aaatgccggt gatacccaat tcaagtgttg cgttatcact cagtgtaaag aaatttttta
    12421 gatggccgag ataaacaaga tgatttcctt cacttcgtgc aaatgccggc gattcggaga
    12481 agccggacgt ggtttgcacg accagctcct ggtaaaatgc attattcgga acgagccagc
    12541 ttaacgatac gccttcatca ttgaggcctt cttcgccaaa aagatttacg tacgcatttg
    12601 gcaggtcgat gaacggaagt gcatgagggt gcgttggatt gatccggcca acagcttcac
    12661 ggaattttcc tgcctttagc tggagctttg ccggcaaaga cagcgttgtt acatatcctt
    12721 cttcaacagt ggcgccgtat ttaccggtct gcggatcacg tccgaatgaa agaaaaaaat
    12781 ctgcgcgcgc ataaggatcc acggttgcct gcaacgagat ctccgtctca ttgaggtaca
    12841 tatcaaaatt cttatcaccc ttgcttatgt atgaaccctg gaaatcgccg atcactccga
    12901 tgtccggatt gaatgaaagg cttgaacgtg gctgcgccgg aggggaagtt tggtcagcgt
    12961 tgttattcat ttgctcttca acctgcttta acagggcaga atcggcagga ttcacaccag
    13021 aactatcctg cgctacaccg atcgttgcta tcaacgagcc cacgacgggt aagaatatgt
    13081 agatgcgatt tttcgattgt cgaataaagt tcatataaac agttttagct taatgaaagc
    13141 tgcaattgca gtcgcgtcgc gactaagctt tgaaacgatt taagctaaaa ctggtggggc
    13201 gcggtctgag gtcttaaaga agtgatagtg gcttatcgat ggttgaacgt cggcgaagaa
    13261 atttccttct gcaataatag ccggaggaat gccgcaggca actgattcag agaattccgg
    13321 gagtataagt tgcaaggcat tgcaaaatgt ccgcggcgag cttattgaga cggatgattg
    13381 tgtataatcg aagccggggt gtttatgaaa aattgaatgg atcacctggc cgccgccggc
    13441 gccggataag aaaattatta gcagaagtaa tgaaataaat ttctttagca ttcaattcat
    13501 tcgtactgca aagtaagaaa taagtattca tatttcattt acgctaatgt gataaaataa
    13561 ctttacctta atagttacct tttcaaaaaa tgagaacact cctcttctgt ttattaattc
    13621 ccacgtttgc acatgcacag tggcctggtt atttttacgc gttcacggtg acggatgatg
    13681 caggcaaggt gatcacgaaa aatgacaaac catatcggct cataccggtt aaaccagcag
    13741 caggtgatat tatgttggac gtattaacgt gcgacgattc tgccacaacc aggttttatg
    13801 taggtggata ccacggcctg agcgacacgc attggctcga aattattcgc gcgagcacga
    13861 aagaaaagat gacgatcgaa tttccttctg cactttcagg tggcaccgac agatactatc
    13921 gtaatctctt tgttggcaaa ttgatttttc ggcctggttc gtaccgggtt aagttacctg
    13981 cttctgattc cgcctgggat aacttacacg aaatacattt ttgccctgat tacggtggcg
    14041 tggattcgta ttgggatgta agtgaattgc aagcgcgatg atgatggtat tctttattcg
    14101 aaactttggg agtccaacgt ttgcagatgc aacatcattc agccataagt tgttcgatcc
    14161 ttttatcagg tatcaaccat agcacagcaa caagtacaaa caaagcgccc gaaataattg
    14221 catttacata tgcaaggggc actgccgcgc tgtaaagaaa taaggaacct atgcctttcc
    14281 ctctttgccg ctgcatgatg ctggctagac gttggtcttc tttatggcat ttttcgatca
    14341 cgatctgcaa tatgttgtac gagacaccgc agaataccat cagcaccgca tatagtgcga
    14401 ccgtaaatgg ctcaaaatga ttttcgccca tccagcccgt ggcaaaaggg atcagcgata
    14461 gccagaataa aagattaagg tttgcccaca taatgcccgc gctgatgtgc ttaaccacat
    14521 gcatcaaatg atgatgattg ttccagtaaa tgccaatgaa gataaaactc agcgtgtagc
    14581 tgagaaatac ggggaacaat ggtttaagag cctgccagtt tgcaccctcc ggaactctta
    14641 gttcgagaac catgatcgtt atgataatgg ccaacacgcc gtcgctaaag gcttctaatc
    14701 ggttttttct catgcagctt taattcattc catagcaatt attttcaaga tcggcttatt
    14761 atttcaaact cgcataaacc aactgttcga atttcacttc gatgtctcca tgactgtcgg
    14821 gtgtctgctg ggtcatcagc aaacatacca ggtgctcttt cggatcgcac caatatgttg
    14881 ttccaaagta tccgccccat ccaaaactgc cttcattgcg cgcgccgtcg gccgctcctt
    14941 tatcagacac aatttcaaaa cccaacccaa aattattttt gccattaaat gatgaatcaa
    15001 gttgcggatg cagcatcatt gcgacgacac ggcgtgaaag aatttgtcta ccattataaa
    15061 ttcccccgtt cattatcatt tgcaaaaaga tagcataatc gtaagctgtt gatgacaacc
    15121 ccgcgccgcc ggaaaaataa tgtttcttgt attttgggta atcagggtcg ataccggagt
    15181 gatctttgct ccaaagaaca acatgttgca gagaatcttc ggtgtaaacg gtagcgagcc
    15241 tgtcgaattt atcttccggc aaattgaacc acgtgtcatt catgccaagc ggtgcgaaaa
    15301 tattttttcg caaaaaatcc tggaggctca ttccgctgat cacttcaatg atacagccaa
    15361 gcaggtctgt gttcaagccg taagtccatc gttcaccggg ctgatgtaca agcggaagtt
    15421 ttccaagcgc cttcatccgg tctaaaagat ctccttccgg agcgccaagc cctgaaggaa
    15481 tctttgcctt tgcatagat
//
LOCUS       DASQJI010000513         7859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1597544,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000513 DASQJI010000000
VERSION     DASQJI010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7859
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1597544"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VEV83_14025"
     CDS             <1..522
                     /locus_tag="VEV83_14025"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYK46290.1"
                     /translation="CSTPFDLRVRNVTSTSAELTWDVPADPVSFLKIIGGEKGSATVI
                     RKQLESTDTRAVVKGLLPNTTYEWTMKGVCGDGKSIAVHGPDFTTLTLASLTNNIKIF
                     PNPVSDQLHIDGLQANQKTKLSIVDFLGNVRLVAFATSSSYSWNIATLRPGSYVLRIE
                     SGDRTVSRWFIKK"
     gene            complement(557..2290)
                     /locus_tag="VEV83_14030"
     CDS             complement(557..2290)
                     /locus_tag="VEV83_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HYK46291.1"
                     /translation="MRQPLLLALFICVFPQENFGQTTQTSDSLERKWWKEAVVYQIYP
                     RSFKDNDGDGIGDLKGIISKLDYIKSLGVDMVWLNPIYSSPNDDNGYDVSDYRNIMTD
                     FGTMDDFDAMLKGMHERGIKFVMDLVVNHSSDEHEWFKQSRSSRTNEYRNYYHWWNAE
                     NGKPPYRYSLFDINHDAWMYDSLTNAYYLHYFSRKQPDLNWENPKLREEVYSMMKFWA
                     DKGVDGFRLDAFGFAAKDTTFPQFPKGFEKNFSLYYSMQGNLHGYLQEMNKEVLSRYD
                     VMSVAEGTGNTLEDAHNLVDANRHELNMAYPFEGVDIAKPEGYSLLHFKEVFSKWDST
                     FQENGWLAVFLANHDQARMVSRFGNDSPEFRDVSSKMLSTFILTMRGTPFYYNGDELG
                     MTNAGFSKIEDYRDMATLNQYKHLQATGGDIDKFMKRIQFASRDNGRTPFQWDNTANA
                     GFTNGTPWIQVTSNYKTINEAAEDKDENSCLNYFRKLVKLRKDNLTLVYGKYTLLDKD
                     NAKVYAYTREGEGEKILVLLNFTSSNADTNISLDANAKLLLSNYKNANINKQQKKIAL
                     RPYEADVYRLQ"
     gene            complement(2849..5752)
                     /locus_tag="VEV83_14035"
     CDS             complement(2849..5752)
                     /locus_tag="VEV83_14035"
                     /inference="COORDINATES: protein motif:HMM:NF028442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HYK46292.1"
                     /translation="MNRWRFVQITFIFVSLLVHTATLNAQPFPYFDFDASNFKNPLRE
                     FGPYTRWWWPGNDVTNEELQREIKMFADNGFAGVEIQPLTMGINPNAPKLRLNKVYSW
                     DTPSFYEHVRAVMKQAKLSGITVDMTAGSGWPTGGPHILPEEGMLTLSYADTIIEGAQ
                     RININVPKQLPDYSSIVIFDTLHLYKKIDASLANLQAVTIAKILKQENDQMVLDPNSV
                     MDVSSSVVAGKLNYEIKHDGKWIVVAFWSIPDGQVATLIASRDPGLVVNHFDSVDIIK
                     NYEHLFGERTGFKAFYGSPFRAVFNDSYEFRSDRHYSENFLSFFKQRRGYDITPWLGA
                     NLERGYNNNAAAFIFPGAKPPFVFSDEDWRLRYDYDLTVGELLQEEFINASDNWLKNR
                     GLLHRTQAYGVKMDVISASGSADIPEAEQLFAKGSEGFIKLVTSGAHLYNRPVATQES
                     FVFFGRSEMTTPQKIKALCDKAFTSGINEIIYSGSPYKYQTEDYGTEGWNTWSTPYSG
                     FDFSSGINEAWPYWKDIKDINLYITRSQYALRSGKPHHDVLIYFPFADFTQEDLVENP
                     KEILVNGYFKDFEPAENGMTNNQLTIKQNWFSKAWQTINALNESGITWEWVNDASIQA
                     ATLTNGKINIRGNEYAALLILNAPYIQWRSAETINSLAKRDANIVVIGDVPEKQPGFL
                     NYRENDEKTSRLMREISSYSYCKQISDSLSLQSWISTLSPPIKFDHPYSFTRTIERVM
                     HDSSRLIFIWNQTNNWQKISMTVDSHLKHSYWLDPQTGEVITATGSGVSKLLSPFGSI
                     ILYATRRKIETNSFGDHAPAMANEKEVMEIDKWNIRSGTTTINHSSLFDWRNNDAFKY
                     QSADGVYTASFNIYKITGKKYWLDLGKVYFTAEVKINGRPAGKKIWAPYEFEITGLLQ
                     RGENAIEIKITPTLRNNFIYEARTGNRKYAQYKGHENSLMPAGLVGPVTVLTF"
     gene            complement(6197..7012)
                     /locus_tag="VEV83_14040"
     CDS             complement(6197..7012)
                     /locus_tag="VEV83_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HYK46293.1"
                     /translation="MEKITRAFLCSLTVLIFACSLSCKKSTSSGSNNPPPPPPPPDTT
                     TYQLVWSDEFDDDTVDMNSWNFERGGNGWGNNEQEYYQADNTSIESGNLVITARKETI
                     GANQYTSSRITTQGKKEFQYGRIEARIKLPVVKGLWPAFWMLGSDINTVPWPKCGEID
                     IMEHINTDSIIYGTMHWDNNGHLQEGSHTTSSPSAYHVYMVEWTKTSIRWYIDSLQYY
                     QSDSFSNGSEEFQAPFFILLNVAVGGNWPGQDIDDSLLPAKMYVDYVRVYQKK"
     gene            complement(7152..>7859)
                     /locus_tag="VEV83_14045"
     CDS             complement(7152..>7859)
                     /locus_tag="VEV83_14045"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK46294.1"
                     /translation="GFEAVETAFWPENISVKQAGKYLKDAGLAVSSAHVELPIGDKKD
                     AMLEIAETFNCKRVIWHGWPEDKRYSSLEGTKQLVEIYNESNHFAKSNGLQFGLHNHW
                     WEYRNKVDGRYVYEVLLESVEPDIFFEIDTYWVKVAGQDPASIVAKFGKRAPLLHIKD
                     GPAKWNDELLKDNPDPMVAVGTGALDFPAIVKAGNGSTEWMIVEMDKTATDVFQAIQD
                     SYAYLVKNKLARGKKAV"
BASE COUNT         2035 a         1741 c         1694 g         2389 t
ORIGIN      
        1 tgcagtactc ccttcgactt aagagtgcgc aacgtaacat cgacgagtgc ggaattaacg
       61 tgggatgttc cggcggatcc agtctcgttt cttaagataa tcggcgggga aaaaggcagt
      121 gccacggtga tccgtaaaca actggaaagc accgacacga gggctgtagt aaaaggcctg
      181 ctgccgaata cgacgtatga atggaccatg aaaggtgttt gtggcgacgg aaaatcgata
      241 gctgtgcatg ggccggactt cacgacgttg acgttggcaa gtttgaccaa taacatcaaa
      301 atattcccga acccggtgag cgatcagtta cacatcgacg gtctgcaggc aaatcaaaaa
      361 acaaaattga gtatcgttga ttttcttggc aatgttaggc ttgtagcttt tgccacgtca
      421 agctcatata gctggaacat cgcaacactg cggcctggaa gctatgtttt gagaattgaa
      481 tccggcgatc gtacagtgtc gcgctggttc ataaaaaaat aaggagagta gaaaattaat
      541 aattccatag tgcaagttat tgcagcctgt aaacatccgc ttcgtacggt cgaagcgcga
      601 tcttcttctg ttgcttattt atgtttgcgt ttttgtagtt agataacagc aacttcgcat
      661 ttgcatccag cgaaatgttt gtgtcggcgt tcgaagatgt aaagttcaga agcacgagta
      721 ttttttcacc ttcaccttct cttgtgtatg cataaacttt tgcgttgtct ttatcaagca
      781 aagtgtattt tccataaacg agtgtgagat tatcttttct cagtttcacc aattttctga
      841 aatagttcag gcaactgttt tcatccttat cctctgccgc ctcattgatc gttttataat
      901 ttgaggttac ctgtatccac ggtgtgccgt ttgtaaatcc ggcattcgcg gtgttgtccc
      961 attgaaatgg tgtgcgcccg ttgtccctgc ttgcaaattg tattcttttc atgaacttat
     1021 ctatatcgcc cccggttgcc tgcaaatgtt tgtattggtt gagtgtcgcc atgtcgcggt
     1081 aatcttcgat cttgctgaag cctgcattcg tcatacccaa ttcgtcgccg ttgtagtaaa
     1141 acggtgttcc gcgcatggtc aggataaatg ttgaaagcat tttcgaagac acatctctga
     1201 actcgggact atcatttcca aacctgctga ccatcctcgc ctggtcatgg ttcgcgagaa
     1261 aaacggcaag ccatccattt tcctggaagg tgctatccca tttactaaat acttctttga
     1321 aatgtaaaag gctgtaacct tccggttttg ctatatcaac accttcgaaa ggataagcca
     1381 tgttgagttc atgccggttt gcatcaacga gattatgagc gtcttcgagt gtattgcctg
     1441 tgccctcagc aacactcatc acatcatatc tgctcagtac ttctttattc atctcttgca
     1501 ggtaaccatg caaattgccc tgcatcgaat aatacaatga aaagtttttt tcaaagcctt
     1561 ttggaaattg tggaaacgtt gtgtcctttg cagcgaagcc aaatgcatcg agacgaaatc
     1621 catcgacgcc tttatcagcc cagaatttca tcatgctgta tacctcctcg cgaagctttg
     1681 gattttccca gttaaggtcc ggttgcttcc gcgagaagta atggaggtag tatgcgttag
     1741 tgagcgaatc atacatccac gcgtcgtggt ttatatcaaa aagactatac ctgtatggcg
     1801 gcttgccgtt ctctgcattc caccaatgat aataatttcg gtactcattt gttcttgagc
     1861 tacggctttg tttaaaccac tcatgctcat cactgctgtg gttaactacg aggtccatga
     1921 cgaacttaat gccacgctca tgcattcctt ttaacatcgc gtcgaaatcg tccatcgttc
     1981 caaaatctgt catgatgttg cgataatcgc tgacgtcgta accattatca tcgttgggtg
     2041 agctgtaaat cgggttcagc caaaccatgt caacgccgag gctttttata taatcgagtt
     2101 tagagataat acctttcagg tcgccgatgc cgtcgccgtc attatcctta aagctgcgcg
     2161 gatagatctg gtataccacc gcttctttcc accattttct ttcaaggcta tctgatgttt
     2221 gagtggtctg accaaaattc tcttggggga aaacgcaaat gaacaatgcc aggagcagcg
     2281 gttgcctcat aaaagttttt actgaagata aggattgtga gaacacgtca tgcaagaggc
     2341 ggcgggcagg ttagttttct ttatttgaca agttagggaa gtaaaaaata tccggtttgt
     2401 ttgaggcaga attttttgca gaatatgatt tgttagttga aactcacgag agcgccgcag
     2461 gaaaaaattt ttccagtagt ctactgacga agaaacatga agcggttagt atgatcaaca
     2521 gcattatcga tatagtcagc ttgttttgca gccgtttcgc cttttcacct tcctcggtct
     2581 gagaatttac gatgctgaaa aaattgaaat aaaaccagct aattaaactt tttcgacgaa
     2641 tcgtaagact gtagtgaatt gtttttgcga atacaagtaa accggcgcac gcgacgacag
     2701 ttcttggaaa catgaacaga aactctctca taagtaggct ttggtgccgt aaactaaaaa
     2761 gaatcctgaa ctgaaggaag cgttaacggc caaataaatg tcccgttcgg gcacggttta
     2821 gaaatttgat cattgagagt gcggacattt agaaagtaag cactgttacg ggtccaacaa
     2881 gtcctgctgg catcaaactg ttttcgtggc ccttgtattg cgcatacttt ctatttcctg
     2941 tgcgtgcttc gtaaatgaaa ttgttgcgca acgtgggtgt gatctttatt tcaatggcat
     3001 tttcgccccg ctgtagtaac cccgtaattt caaattcgta tggagcccat atctttttgc
     3061 ctgctggcct gccatttatt tttacttcag ccgtgaaata aactttacca agatcaagcc
     3121 aatacttttt gccggttatt ttatagatat taaaagaggc cgtgtaaact ccgtctgcag
     3181 attgatattt gaacgcatca ttattcctcc aatcgaagag cgagctgtgg tttatcgttg
     3241 tagtgcctga acgtatattc cacttgtcga tttccatcac ttctttttcg ttcgccatgg
     3301 cgggagcatg atcaccgaat gagttcgttt cgattttgcg gcgcgtggca tataaaataa
     3361 ttgaaccaaa tggcgaaagc agctttgaga cgcctgaacc agtagccgta ataacttcac
     3421 cagtttgcgg atctaaccaa tatgaatgtt tgagatgcga atcaactgtc atcgatatct
     3481 tttgccagtt attggtttgg ttccaaataa aaatcaatcg gctgctatca tgcattactc
     3541 tttcaatcgt gcgtgtaaac gaatatggat gatcgaattt gatcgggggt gacaaagtac
     3601 taatccaact ctgtaacgaa agagaatcac tgatttgttt acagtaggag taagacgata
     3661 tttctcgcat tagtcggctc gtcttttcgt cgttctccct gtaatttaaa aagcctggtt
     3721 gtttttccgg aacgtcgccg atcactacga tattagcatc gcgtttcgca agactattga
     3781 tagtctctgc actgcgccat tggatgtaag gcgcatttaa aatcagcaaa gccgcgtact
     3841 cattacccct gatgtttatt tttccgtttg ttagagtcgc agcctgtatc gaggcgtcat
     3901 tcacccattc ccatgttatg ccagattcat tgagcgcgtt gatcgtctgc cacgctttgc
     3961 taaaccagtt ttgcttaatt gttaactggt tatttgtcat gccattttca gccggttcga
     4021 aatctttaaa atatccgttc actaaaattt ccttcggatt ttcaacgaga tcttcctgtg
     4081 taaaatctgc aaagggaaaa tagatgagca catcgtgatg tggcttacct gagcgcaagg
     4141 cgtattgaga acgcgtaatg taaagattga tatccttaat gtctttccaa tatggccagg
     4201 cttcattgat gcccgaagaa aaatcaaatc ccgaataagg cgttgaccac gtgttccacc
     4261 cctccgttcc gtaatcttct gtttgatatt tatatggact gcctgaataa atgatctcgt
     4321 tgatgccgga tgtaaatgct ttatcacaca atgcttttat cttctgcggt gtggtcatct
     4381 cagaacgacc aaaaaacacg aacgattcct gcgttgccac gggacggtta tacagatgtg
     4441 ctcccgatgt aacgagtttt ataaatcctt cggagccttt tgcaaataat tgctctgcct
     4501 ccggaatgtc agcactgcca ctagcagaaa tcacgtccat cttaacacca tacgcttgtg
     4561 tacgatgcaa gagcccgcgg tttttcagcc agttatcgct ggcatttata aattcttctt
     4621 gtaaaagttc accaaccgtg aggtcatagt catagcgcaa gcgccagtct tcatccgaaa
     4681 aaacaaaagg tggcttcgca cccggaaata taaaagcggc ggcattgttg ttataaccgc
     4741 gttcgagatt cgcaccgagc catggcgtta tgtcgtatcc tctgcgttgt ttgaagaaag
     4801 aaagaaagtt ctctgaatag tgcctgtcgc ttctgaattc gtagctgtcg ttgaaaacgg
     4861 cgcggaatgg acttccataa aaggctttga aaccggttcg ttcaccaaag aggtgttcat
     4921 aatttttgat gatatcgacg gaatcgaaat gattgacgac taaaccgggg tcacgactcg
     4981 cgatcaatgt agctacttgt ccgtccggta ttgaccaaaa agcgacgacg atccatttgc
     5041 catcatgctt tatttcgtaa ttcagtttac cggcaacgac agaacttgat acatccatca
     5101 cagagtttgg atcgaggacc atttgatcat tttcctgttt caggatcttc gcgatcgtca
     5161 cagcctgcaa gttggccagt gaggcatcta tcttcttata taaatgcagc gtgtcgaata
     5221 tcacgatact cgaataatcc ggtaattgtt tgggcacatt gatattgatc ctttgtgcgc
     5281 cttcaataat tgtatcagca taactcagtg tcaacattcc ttcttccggc agaatatgtg
     5341 gtcctcccgt tggccagcca cttcctgcag tcatgtctac tgtgatgccg ctcaatttcg
     5401 cctgtttcat tacggcgcga acatgctcat aaaacgatgg ggtatcccaa ctatacactt
     5461 tattcaatcg caatttcgga gcatttggat tgatgcccat ggtgagtggt tgtatttcca
     5521 cgccggcaaa tccattgtca gcaaacattt ttatttcccg ttgcaactct tcgttcgtta
     5581 catcgttgcc gggccaccac cagcgagtgt aagggccgaa ttcacgcaaa gggtttttga
     5641 aatttgaagc gtcaaaatcg aaatatggaa atggttgggc atttaatgtt gcggtgtgaa
     5701 ctaaaaggct gacgaagatg aaagtgatct gaacaaatcg ccaacggttc ataattttca
     5761 aagttcggct cgaagaagtt ttgatgaaaa taatgttttg aaattgttgt tcaataattt
     5821 ctgcagaaag acaattatag aagtgactta tcttcccatc cgcgaaaatg ctatgcatgt
     5881 gatttgggaa taggctcgtg gagttctaat gacctatcgc tccgaatgct gacggccgtc
     5941 gaaagatcac ggtcgtgcct cccggactta atttacgata gggttttttc tacgaaagag
     6001 tggtccctgc ggaaagtgaa gttgagctaa tgtttcgctt atggcaaacg gttttgagtc
     6061 ccgcagggac gaccatctgg taggcctatt gataagaagg atgtgtgtta agtcccggag
     6121 ggacgaaccc atgaccttat gttaatgcat tgcattttct gtaagggcta ccgcttcttc
     6181 aacccttcaa aggcaattat tttttctgat agacacggac atagtcaaca tacatctttg
     6241 ctggcaaaag gctgtcgtca atatcctggc ctggccagtt gccaccaacc gcaacgttca
     6301 gcaatatgaa aaacggcgcc tggaattctt cactgccgtt gctaaagctg tctgactgat
     6361 aatattgtag gctatcgatg taccatctga tgctcgtttt tgtccactcc accatgtaca
     6421 cgtgatatgc tgatggggac gacgttgtgt gacttccttc ctggaggtgc ccattgttgt
     6481 cccaatgcat tgttccgtat ataatgctgt ctgtatttat atgctccata atatcgatct
     6541 caccgcactt aggccaggga acagtattga tatccgaccc cagcatccag aacgcgggcc
     6601 acaagccctt cacgactggt agttttatac gtgcttcaat tcttccgtat tgaaattctt
     6661 tcttgccttg tgtggttatg cgtgatgaag tgtactgatt tgcgccaatg gtttcttttc
     6721 gggctgtgat cacaaggttg ccactttcga tcgatgtatt gtcggcctgg taatattcct
     6781 gctcattatt tccccagccg tttccaccac gttcaaaatt ccatgaattc atgtcgacag
     6841 tatcatcatc aaattcatca gaccaaacca attgatacgt ggttgtgtct ggaggtggag
     6901 gcggaggtgg tggattattc gagccggatg atgttgattt tttgcaagaa agagagcagg
     6961 caaaaattaa aacagtcagg ctacatagga aggcgcgtgt aattttttcc atcttcggtc
     7021 aaataaaatt gaaattacgt ttcgttgatg gacttgttaa taatattaaa gaatgttagc
     7081 ttcctttctc tatttcagcc acgcttcgat aaccacttcg ttctttcctg taaaatagtt
     7141 tgcctgtgtg tttatacagc ctttttgcct cttgccaatt tattcttcac caaataagca
     7201 taactgtcct gaattgcctg gaacacatcc gtcgccgttt tgtccatttc aacgatcatc
     7261 cattcggtac ttccgttacc tgctttaacg atagcaggaa agtccagggc gcccgttcca
     7321 acggcaacca tgggatcagg gttatctttc agcaactcgt cgttccattt agcgggacca
     7381 tctttaatat gaagcaatgg tgcccgtttt ccaaacttcg ctacaattga tgctggatct
     7441 tgaccggcaa ctttcaccca gtaagtatcg atctcaaaaa aaatgtcagg ttccaccgat
     7501 tccaaaagaa cttcgtacac atatctgcca tcaactttat tcctatattc ccaccaatga
     7561 ttgtgcaggc caaactgcag gccgtttgat tttgcaaaat gatttgattc gttgtagatc
     7621 tcaaccaatt gttttgtgcc ttctaatgaa ctgtatcgct tgtcttcagg ccagccgtgc
     7681 cagatcactc ttttgcagtt gaacgtttct gctatttcga gcatcgcatc ttttttatca
     7741 ccgatcggca gctcaacatg agcagatgat actgcaaggc ccgcatcttt taaatatttg
     7801 ccagcttgtt ttacggagat attttcaggc caaaaagcgg tttcaacggc ttcgaatcc
//
LOCUS       DASQJI010000514         5647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_984220,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000514 DASQJI010000000
VERSION     DASQJI010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5647
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984220"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2363)
                     /locus_tag="VEV83_14050"
     CDS             complement(<1..2363)
                     /locus_tag="VEV83_14050"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46295.1"
                     /translation="MTKTPPLTKLGICFILFLVISNGNTVLAQVSGFKTITTNIGVTN
                     NGTNCSILQPDNKTINCGFVQEGDKYQIAFYRLDSNGIADGSFGNNGVSLFYNFLPNT
                     YQGASIRSVALQADGKIVAAGTAWYQSGSYFLSNILVMRLNRNGTIDSSFGEGGTVRT
                     NIYSVNNLSVDDAFAIKVLTNGTILIGGTSYDYAQHRMVFVEYKSNGAINTSFGSGGA
                     VLIDINHRDDEIFDMAVQPDGNIIGAGEYFNVNSSYDVAVVRLLSNGALDNSFGTNGI
                     VTTRIGAGGDVAKSVALQSNGKIVIAGSTRTTTQAKDDILSIRYNQNGTIDSSFALNG
                     IYIKDIDGDNDVANSVKIQPDNKIILGGYATLNGVNNFLSLRLKNSGTPDIPYGSNGM
                     VTTSIFSQGDAANAMILQADGKIIEAGQSTNGASTFFSSIRYNTNGSLDDSYSNDGIH
                     VFSIGNSNDKAGKMVKLPWNNTLLLCGSANDYWALANYNVSSLSLNKNFGVNGVQTFR
                     YSDQYSSTTPEVAVDSALQKIYLCGETDQYGFIMIRLNRNGSLDTTFGTRGVVKYFMS
                     IYYGGLAVLPNHKIITGGLQQGSTNYTFLARFNANGTIDSSFGTNGLVKNLAVTPNSI
                     MYDKYRNRILSGGYMFISFSGSGVGVMAIKNGGVIDSSFGTNGVGGKAIPNGSSQVYF
                     RYRLAQDNYGRILISGGVARSGYNFSVTRFLANGSPDANFGNGGVVVTQTAKGSYYDT
                     YNEGIASGCNMNSCSVVTTGIEMNDANEKSKIAIIVYDNKGNIDSIP"
     gene            complement(2516..3883)
                     /locus_tag="VEV83_14055"
     CDS             complement(2516..3883)
                     /locus_tag="VEV83_14055"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK46296.1"
                     /translation="MKNPILFIILPLSCFLSCKKDPVNERLSANRSLEKAAVTTHPNI
                     ILIVGDDIGYEILKCYGGQSYQTPNLNQMAAQGVRSTQCYASPLCSPSRFMLLTGKYN
                     FRNYTAWGIMDPAQKTVANMLQDAGYKTLVAGKWQFDGADNSIKKFGFDDYLVWEPYT
                     GKNELSAGSRYKNPNLYQHGAYLNPKQTKDKYGDDMFTHYITQFLDSNYNKPNPFFVY
                     YPMALAHKPFCPTPDDPEFASWDPNLNISDTSFFPSMIKYMDKKIGVIINKVQALGLT
                     NNTVILFVGDNGSPVEIYSMFAGYLLRGGKGETTRIGTCVPFIAYSPGNVLTNCVDNE
                     LVDFTDFLPTIASIANIPKPVDYGVLDGVDFAWQLYGNTGTARSQVFCHFDPHPGHGH
                     IARWAQTIQYKKYDSLTNTNQRNRFYDIISDGPEFHAIPAKSRTPEEKNISQTFDSLF
                     RTMHN"
     gene            complement(5237..>5647)
                     /locus_tag="VEV83_14060"
     CDS             complement(5237..>5647)
                     /locus_tag="VEV83_14060"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK46297.1"
                     /translation="KGWLQFIGDRNIHSKEDAIKYINKVNTTPNYYYWTVRRLEGTEP
                     IGIISFIKRNYLEHFDIGFAFLPQHNGKGYAYEAAKKILSVVSSEPEHSTIVATTLPH
                     NVSSIKLLHKLGFHLEKEIQAGREKLQVYSNGHG"
BASE COUNT         1527 a         1175 c         1187 g         1758 t
ORIGIN      
        1 tgcggtatgc tgtcgatgtt gcctttatta tcatacacga taattgcaat tttagatttc
       61 tcatttgcgt cattcatctc gatgcctgtt gtgacaaccg aacagctatt catattacag
      121 cctgaggcaa tgccctcatt ataagtatcg taataggaac ccttcgctgt ttgcgtaaca
      181 acaacgccac cgtttccgaa gttggcgtct ggactgccat tagccagaaa ccttgtcaca
      241 gaaaaattat acccgctacg tgccacgccg ccgcttatta aaatgcgtcc gtaattatct
      301 tgcgcgaggc gatacctgaa ataaacttga gagctcccat tcggtattgc tttgccacct
      361 acgccgttgg taccaaaact gctgtcgata acaccgccgt tttttattgc cattacacct
      421 acgccggaac cggagaaact gataaacata tatccgccgc ttagaatgcg atttctatat
      481 ttatcataca tgatcgaatt gggtgtaacg gcaaggttct taacaagacc attggtgcca
      541 aacgaagaat cgatagttcc gtttgcattg aagcgtgcaa gaaaagtgta attcgtactt
      601 ccctgctgca gcccgccagt tattatttta tgattgggca acaccgcaag tccgccgtaa
      661 taaatagaca taaaatattt caccacaccc cttgttccga atgtagtatc taacgacccg
      721 ttcctgttta agcggatcat gataaaacca tactggtccg tttcgccgca caaataaatt
      781 ttttgtaagg cgctgtcaac cgctacctcc ggagtcgtac tgctgtattg atcggaatac
      841 cggaacgttt gtacaccgtt cactccaaaa tttttattga gtgaaagact agatacatta
      901 tagtttgcaa gcgcccagta atcgtttgca cttccacaga gaagcaacgt gttgttccat
      961 ggcagcttga ccattttgcc ggctttatca ttgctgttac caattgagaa aacatgaatg
     1021 ccgtcattcg agtatgaatc gtctaacgag ccgttggtgt tataccgtat gctgctaaaa
     1081 aaagtgcttg cgccatttgt tgattgaccc gcttctatta tttttccatc agcctgcaat
     1141 atcattgcat tggcagcatc accctggctg aatatagacg ttgtcaccat tccgtttgaa
     1201 ccgtaaggaa tatctggcgt gccactattc ttaaggcgta aagagagaaa attatttaca
     1261 ccatttaaag ttgcgtagcc accaagtatt attttattgt cgggttgaat ttttacggaa
     1321 ttagcaacgt cattatcacc gtcaatatct tttatgtaaa ttccattcaa ggcaaagctg
     1381 ctgtctattg ttccattttg attgtagcgg atggaaagta tgtcatcctt tgcctgcgtg
     1441 gttgtgcgtg tactgcctgc aatcactatt ttcccgtttg actgaagcgc aacacttttc
     1501 gcaacatcgc cacctgcacc gatgcgggtg gttacaattc cattcgtgcc gaaactattg
     1561 tctaacgctc cgtttgataa aagtcgaact accgctacgt cataactgct gtttacattg
     1621 aaatattcac cggcgccaat aatatttcca tccggctgaa cagccatgtc aaatatctca
     1681 tcgtccctgt gattaatgtc tatcagcacg gcgcctccgg aaccaaagga agtatttatc
     1741 gcaccattcg acttatactc aacaaatacc atcctgtgct gtgcgtaatc ataagaagtg
     1801 ccaccaatta atatcgtacc gttggtcaag acttttattg caaaagcatc atcgaccgaa
     1861 agattattta cagaataaat atttgttcta acagtgccgc cttctccaaa ggaggagtca
     1921 atagtgccgt tgcggtttag gcgcattacc aggatattac tcagaaaata agaaccagac
     1981 tggtaccatg cagtgccggc tgcaacgatc tttccatcgg cctgcaatgc aacgctgcgg
     2041 atagacgcgc cctggtatgt atttggtaaa aaattataaa agagactcac tccattgttt
     2101 ccaaacgaac cgtctgcgat cccattacta tcgagccggt aaaatgcaat ttgatattta
     2161 tcaccctcct gcacgaagcc acaattaata gttttattgt caggctgcag tatcgagcag
     2221 ttggtgccgt tgtttgttac accaatattt gtagttattg ttttgaaacc cgatacctgg
     2281 gctaagactg tgtttccgtt actaattact aaaaagagaa taaagcaaat cccgagtttg
     2341 gttaaaggcg gtgttttagt caatgtgtta gttttagagc cggcaatata aatagatttt
     2401 cgcggtcggc taatattcca aacatcaaat tgcaacatgc cggggcaatt atagaaagcg
     2461 gcgctttcat tcgcgctatt ctttatgtgc atataaatta aaaatagaac gatcattagt
     2521 tgtgcatagt tcgaaagagc gaatcaaatg tttggctgat gtttttttct tcaggagtac
     2581 gcgactttgc ggggatggca tggaattccg ggccatccga aattatatcg taaaacctgt
     2641 ttctttggtt ggtgtttgtg agcgaatcgt attttttata ttgaatagtt tgggcccaac
     2701 gtgcaatatg accatgccca ggatgcggat caaagtgaca aaatacctgg cttctcgccg
     2761 ttccggtatt tccgtacaat tgccaggcaa aatccactcc gtctaagaca ccatagtcaa
     2821 caggctttgg aatgttagcg atggatgcga tggtgggaag aaaatcagta aagtcgacca
     2881 gctcgttatc tacacaattg gtaagcacat ttccgggaga ataagcaatg aacggaacgc
     2941 aagtgccaat tctcgtcgtc tccccttttc ctcctctaag caagtagccg gcgaacattg
     3001 aataaatctc aacaggagag ccattatctc ctacgaaaag gataacagta ttattcgtaa
     3061 gtccaagtgc ctgtacttta ttaatgatga cgccgatttt tttatccata tattttatca
     3121 tcgaaggaaa gaaactcgta tcgctaatat tcaggttggg atcccatgag gcaaattccg
     3181 gatcgtctgg cgtagggcag aatggtttgt gtgccaatgc cattggatag taaacaaaga
     3241 agggattagg cttgttgtaa tttgaatcca ggaactgcgt gatataatgc gtgaacatgt
     3301 catccccgta tttgtctttt gtttgcttcg ggttgagata tgcgccatgc tggtatagat
     3361 tggggttttt gtatcttgat ccggcactca gttcattttt tcccgtatag ggttcccata
     3421 ccaaataatc gtcgaaacca aattttttta ttgaattgtc ggctccgtcg aattgccatt
     3481 ttccggcgac caaggtttta tatcctgcgt cctgcaacat gttggcaaca gttttttgag
     3541 cagggtccat aatgccccag gcggtgtaat tacgaaaatt gtatttacct gtaagcagca
     3601 taaaacgaga cggagaacaa agcgggcttg cgtaacattg agttgatctc actccctgcg
     3661 cggccatttg gttcaggtta ggtgtttggt aagattgccc gccatagcat ttcaaaattt
     3721 cataaccaat atcatctcca actatcagga taatattcgg atgagttgta acggcagcct
     3781 tttcaagcga acgattagct gataaacgtt cgttgacagg atcttttttg caagagagaa
     3841 aacaagataa cggcagtatt atgaataata ttgggttttt cattgcaagt aattttatct
     3901 gaacagttga ttcggaacat atttttgaaa aataaagatg caatttgctc tcacagttac
     3961 gcaacagcga tccacttgaa agaacgcgaa aaatataggg tccacttttg atttttctgc
     4021 gtctcaaccg aagcctgtac caatatttgt ggttatttct ttgaaacctg atacccgggc
     4081 gagaagcgtg tctctgttgc taatgattga agacagaata tagcaaatcg caagtttggt
     4141 gaaaggcggt gttttggtca atgtattgga tttgtaggaa gcaatataac tataatttac
     4201 aaaggcggta acattctcct aaacctgtca ggtcttgccc gccatggtat gggaaggaag
     4261 ttgtccttcc ggttttcgct ccgagaggct cctgctaggg acgatgcatg ttggaaaaag
     4321 aaatctcgag ttccaggaaa caagtcccaa agaaattaaa attaaaagag gtccggcggc
     4381 gttgttatct gttattcgtt ttctttcggt ctttaatttc ttcttgtttt ggtaaattcc
     4441 ttcttttttt ggttcttaag atttggtttt ggaatttttt tggttcttgg gatttggttc
     4501 ttgagatttg gttcttgaga tttggttctt gagattttga aagtgatcgc atgatcctct
     4561 gcgagagacg atgcttgaca taagaagttg taacaattta gctaaacccg ccgggtcttc
     4621 tcaagttcca ggaaacaagt tccaaagaaa ttaaaattaa aaaattaaaa caggttcgag
     4681 cagcgttgtt aattgttatt ggtttttttt cggtctttaa tttctttctt gttttcgtaa
     4741 attctttctt tttttggttc ttaagatttg attttggaat ttttctggtt cttgacattt
     4801 ggttcttgag attttgaaag tgatcgccaa taaaaggaca atcgctttcg tgcgcctccg
     4861 gtcaaacagg accgtggcat ctcatcacgt ttcttatcag gagatccccg ctttcgcgag
     4921 gatgacgttc tgagaacgag tcgtcgtctt cgtagcaatc aaggctgttt taacggatat
     4981 cttttctccg tgtatctctg tgcgatcctc ctttaactct gtggtaaata tttttttcaa
     5041 accacagagt cgcacagagt ttttcacgga gttcacaggg aaagcgaacg cgaatcatta
     5101 attatgtgcc tatcgtgtct caatggttca atacgaaaaa cctttcaggg agatcccgca
     5161 tttgcgagga tgacgttctg cgagaggcga ttgcttttgt agcaacaaga tcaagacgca
     5221 tcgagcatca gtaagttcat ccgtgaccat tcgaatacac ctgcagcttt tcccttcctg
     5281 cttgtatttc tttttccaaa tgaaatccaa gtttatgcag cagtttaata gaactcacat
     5341 tgtgtggtag tgtggttgcg acaatagtag aatgttcagg ctcggaacta actacggata
     5401 gaattttttt agccgcttcg tacgcatagc ccttgccatt gtgttgaggt agaaatgcga
     5461 aaccaatatc aaaatgttcg aggtagttgc gtttgataaa tgatatgatc ccaatcggtt
     5521 cagtaccttc taaacgccgc acggtccagt aataataatt tggtgtggtg tttactttat
     5581 tgatatactt aatcgcatct tcttttgaat gaatgttcct gtctccaata aactgcagcc
     5641 acccttt
//
LOCUS       DASQJI010000515         9225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2980996,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000515 DASQJI010000000
VERSION     DASQJI010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9225
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2980996"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1206
                     /locus_tag="VEV83_14065"
     CDS             <1..1206
                     /locus_tag="VEV83_14065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HYK46298.1"
                     /translation="GKSAMFPLHIWLPDAMEGPTPVSALIHAATMVVAGVYLVARLFP
                     LYSFDVVALNIVAYVGAFSALLAATIACTQTDIKRVLAYSTMSQIGYMMFALGVSRYG
                     GEQGLGYMASMFHLFTHAFFKSLLFLCAGAVIHVVHSNEMKDMGGLRRLMPLTHIAFL
                     IACLAIAGIPPFSGFFSKEEILTAAYDSNRLIYVVGVFTAMLTAFYMFRLYFSIFWNE
                     APSPLERAGGEVFHGEAPFSMKISMAVLALCTVIAGFVPFGSFVTSDGSPLNSNIDIP
                     LAAIPVSLSVLAILFAARLYRKQNELPDKISASLGTLYRSAYRKFYIDEIYLFITKKI
                     IFNLVGRPAAWIDRNIVDGLMNLIAAITSKISSLIKVLQSGRVQNYALYFFGGIVGLA
                     VMFIYLWKG"
     gene            1268..2770
                     /locus_tag="VEV83_14070"
     CDS             1268..2770
                     /locus_tag="VEV83_14070"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HYK46299.1"
                     /translation="MNLSLLILVPVLTAITILFGKDLKQVRSAALLGSVVQFGAALFL
                     LYAYSHERAAGNTAAMVFEDAYLWYPALHIDYHIGVDGISVAMILLTSFVVLAGVLVS
                     WNMERMSKEFFFLLIVLSVGAYGFFISLDLFCLFFFFELAVIPKFLLIGIWGSGKKEY
                     SAMKLALMLMGGSALVFVGLLGLYFSSSPYAPQTFDLVRLSHTFISVEMQKIFFPFAF
                     VGFGIFGALFPFHTWVPDGHSSAPTAASMFLAGISMKLGGYGCLRVATYLMPEAAHFY
                     APAIIVLATIAIIYGAFATMMQKDLKYINAYSSVSHCGFVLLGIGMLTQTSINGAVMQ
                     MVSHGLMTALFFAAIGMIYDRTHTRWTAQLGGLLKVTPFISTVFVIAGLCSLGLPGFS
                     GFVAEVTVFMGSWQNANTWYRIATILSCASIVVTAVYILRAVGQVIMGPLGNVHYSGL
                     KDARWNEKFAAGILIIGIIAIGVAPFWLNNLITPGTEHIVEHGISSLSLK"
     gene            2781..4196
                     /locus_tag="VEV83_14075"
     CDS             2781..4196
                     /locus_tag="VEV83_14075"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HYK46300.1"
                     /translation="MDGLSLLMNMKFEWMVLLIIFILLFMKLQSREWKTTNVLIVINI
                     LLLANFGLGFFMNNDGTLFGDTFVTTKLIELQKNILNLGALIISTQAYSWLRTHKHVL
                     EFYMLLLSTLLGMFLMISAGNLLMFYIGLELSTIPLAALCNFDLEKRQSSEAAMKLII
                     SSAFSSGLLLFGISLLYGTTGTLDFTQLPQHLDGSALQLFAFILLLAGFAFKISVVPF
                     HLWTADVYEGSPVPVTSYLSVVSKAAFLFVFVSVLYHVFKPIADTWYNILLLLSVLTM
                     LTGNLFAMRQNNLKRFLAFSSITQMGFILVGISGSSQIGAASVVYFLLIYVFSNLGAF
                     GVVAFVSAATGKETMDDYRGFYKTNPFLAWVLTISLFSLAGIPPTAGFFGKFFLIMAG
                     AGKGNYVFITIAALNMIISLYYYLKIVKAMFMDANEQPVEKLFVGGLPKFAMLVCMAG
                     VLAIGFIPQVYNYIYSLSFGF"
     gene            4251..4679
                     /locus_tag="VEV83_14080"
     CDS             4251..4679
                     /locus_tag="VEV83_14080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46301.1"
                     /translation="MAINQNHLFEELNGVKCGIVEKNVSKERADFLKHILEYNGYTVL
                     IVPGAPAKTVPPKPAQPGVTQTVPAPVTTTAETVPETPVPPPPETFTVGVTDVTFNPI
                     NAIFGRLLKAPGGHIVTLAYWHQKEKDPHDEVPYFENENQ"
     gene            4969..7392
                     /locus_tag="VEV83_14085"
     CDS             4969..7392
                     /locus_tag="VEV83_14085"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46302.1"
                     /translation="MRTTLQLIAVFACCLLLNKVRANETEPNNTSANANTLALNSSNT
                     GAVNVGADADWWKVTTNADGKLNVTLQGLSGRYMSLHIYDNNGTTEFIYQDYISPTIT
                     LSVDGLAPGTYYIKINCTSVTDTSTYNISNSLTLTGINNDAEPDSIKVQALSLPLNGS
                     KTGHVGYYYNNHRDSVDWYKVTTTADGELDVSLAVNTGGHYISIKLYDNDGVSLLASQ
                     DYISPSATIKTDGLAAGTYYIKVHCTGVNDFDTYTLKDTLIKPAISTDIEPNATANQA
                     LTLAQNGSATGHVGYYYNHSRDTADWYKVTTTSDGELDITLGYNYGSHYISIHLYDGN
                     KTTLLNYQDYISPSATIKKDGLAAGTYYLKVNCTGTNDFDTYTLKDTLKLYHYGNDAE
                     PNARPYQARTLPANTTVAGHVGFYFKSVKDTFDFWKINYTGSGALTLTLNADPNKLDG
                     GYRYMSLHVFKDTNAAEIYYMDYINPGAGTFTVNLNSLTAGYYYVKVYCTGYNTDFEA
                     YGLGNSFGQILNIAKIKASDYDTAASCSNTNYVRFKCSNGTPPYKVILYRYGVMYGQI
                     TGGLGSVYFSWSSLPPGAYYAKAYSDGATGNAFSKSQTIGVVPIPGGPFTTNITATQA
                     RLNWTPVSCSKLDSILVRVHGTNSWYRYQVPGTSTSATISGLLSSTVYDWKVAAVDSA
                     NGILATGAFTSLVTFTTAAAFAGTGTGQNDAVKITANEGSLSIHTIPNPATNSFKIQF
                     ASTINGTASAILIDMNGKTVWSSGTVNISSLNGTLVNTNQIKSGVYYLRIMNEQGTLN
                     ATTKVIIAR"
     gene            complement(7444..8142)
                     /locus_tag="VEV83_14090"
     CDS             complement(7444..8142)
                     /locus_tag="VEV83_14090"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HYK46303.1"
                     /translation="MESYHDKRFPNETESYRYARNELLEAEINLRRQTEEVAAMRRKL
                     PNGGKLKEDYVFEEMDGNGAIKKTKLSELFEPGKESLIIYSFMFGPQNQKPCVMCNSI
                     IDGIDGMVFHAEQRVNIAVVAKTSIEKFKQWADSRGWKNVRLLSSAKNSYNKDYFGEN
                     EKLNQLPALNVFRKTPEGIFHFYATELLFAPEDEGQDGRHVDSIWPLWNLFDLIPEGR
                     GTTWHPKHEYAKTK"
     gene            complement(8292..9119)
                     /locus_tag="VEV83_14095"
     CDS             complement(8292..9119)
                     /locus_tag="VEV83_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK46304.1"
                     /translation="MNKKLFATITCVLLFTIIKAQDADSIRRKHIEDSTNALKAKPTE
                     LWSPEPPIVTPGNTPQDAPSDAIILFDGKNLDAWRSVKDTTQPADWTVADGVFTVNKK
                     GGNIETKQRFMDYQLHLEWREPENANFKGQEKGNSGVFLASTGRGDSGYEVQILNCYN
                     NKTYVNGQTGSVYKQVIPLANACKKPGEWQTYDIIWTAPRFDAVRNLASPARVTVIHN
                     GVLLLNDFELKGQTRYIGNAYYTPHGASPIKLQAHGDKSDPLSFRNIWVRPLDLNQH"
BASE COUNT         2393 a         2031 c         2026 g         2775 t
ORIGIN      
        1 ggaaaatctg cgatgttccc gttgcacatc tggttgcccg acgctatgga gggcccaacg
       61 cctgtttctg ctttgatcca tgctgctaca atggttgtgg caggagtata tcttgttgca
      121 aggttattcc cgctttattc atttgatgtt gttgctctga atattgttgc ttacgtgggt
      181 gctttctcgg cattgcttgc cgcaacgatt gcctgtacgc aaacggatat taaacgcgtg
      241 cttgcgtatt caaccatgtc gcagatcggg tatatgatgt tcgctcttgg agtgtcacga
      301 tatgggggcg agcaaggcct cgggtatatg gcctccatgt tccacctctt cacgcatgcg
      361 ttttttaaat cgttgctttt cttatgtgcc ggagcggtga tccacgtcgt gcacagcaat
      421 gaaatgaaag atatgggtgg tttacggagg ctgatgccgc taacccatat tgctttcttg
      481 atcgcttgtc tggccatcgc aggaatacca ccgttttcag gatttttcag caaggaagaa
      541 attctcacgg ctgcttatga ttcaaatagg ctgatctatg tggttggggt attcacggcg
      601 atgctcactg cattttatat gttcagattg tatttttcaa ttttctggaa tgaggccccc
      661 tctcctttgg agagggcggg gggtgaggtc ttccacggcg aggcgccttt ttctatgaaa
      721 atatcaatgg cagtcttagc actttgcaca gtgatcgccg ggttcgttcc tttcggttcg
      781 tttgtaacat ctgacgggtc gccgctcaat tcaaatattg acattcctct ggctgcaata
      841 cctgtttcgc tttctgtatt ggcgatctta tttgcggcgc gattgtaccg caaacaaaac
      901 gagctgccgg ataagatctc ggcttcgctg ggaacattgt atcgctctgc ctacaggaag
      961 ttttatattg atgagatata tcttttcatc accaagaaaa taatttttaa cctcgtcgga
     1021 aggccggcgg cgtggatcga cagaaatatt gtggatgggc tcatgaattt gatcgcggcc
     1081 atcacgtcga agatctcttc attgataaaa gtattgcagt cggggagagt gcagaattat
     1141 gcattatact tttttggagg gatcgtcgga ctggcggtga tgtttattta tttatggaaa
     1201 gggtgagttg tgaccactcg atctgcaaac cgaaaagatt aattgatagc tgttttaaat
     1261 taacgaaatg aatttgtctt tgctcatatt ggttcctgtg ctcactgcca ttacaatttt
     1321 gtttggtaag gatttgaagc aggtgagaag cgccgcgctg ctcgggtctg tggtgcaatt
     1381 tggcgccgca ttatttttat tatatgcata ttctcatgaa cgtgcggcgg gaaacaccgc
     1441 cgcaatggta tttgaagacg cttatctctg gtatcctgcc cttcatatcg attatcacat
     1501 aggtgtggat ggtatttccg ttgccatgat attactcact tcattcgttg tgcttgcagg
     1561 tgttttagtt tcatggaata tggagcgaat gagcaaagaa tttttctttc tgctcatcgt
     1621 attgagcgtg ggggcatatg gattttttat ttcgctagat cttttttgtt tgttcttctt
     1681 ctttgagctt gcggtgatcc cgaaattttt attgatcggt atttggggca gcggcaaaaa
     1741 agaatacagc gcgatgaaac tcgcattgat gctcatgggc gggtcagcac ttgtgtttgt
     1801 cggactgctc ggtttatatt tcagcagcag cccatatgca ccacaaacat tcgacctcgt
     1861 gaggttatcc cacacattca tttcggttga aatgcaaaaa atatttttcc cgtttgcatt
     1921 tgttggtttt ggaattttcg gagcgttgtt cccattccat acctgggtgc ctgacggtca
     1981 ctcatctgca ccaacagcag catcgatgtt tctcgccggg atatccatga agctgggtgg
     2041 atacggatgc ctccgcgttg ccacatatct catgcccgag gcagcccact tttatgcccc
     2101 ggccattata gtgctggcaa ctatagcgat catctacggc gcctttgcca cgatgatgca
     2161 aaaggatcta aagtacatca acgcatattc ttccgtgagt cattgcgggt ttgtgttgct
     2221 tggtataggc atgctaacgc aaacgtcgat caacggcgcc gtgatgcaaa tggtgtctca
     2281 tggtttaatg acagctcttt tcttcgctgc catcggcatg atctatgacc gcacgcacac
     2341 aaggtggacc gcgcaactgg gcggcttatt aaaagttaca ccatttattt caaccgtgtt
     2401 tgtgatcgcc ggtttatgct cattagggtt gccgggattc agcggctttg ttgccgaagt
     2461 aaccgtgttc atgggttcgt ggcaaaatgc caatacatgg tatcggatcg caacgatcct
     2521 gtcctgcgcc tctattgttg tcacggcggt ttatatatta agagcggtcg ggcaggtgat
     2581 catggggccg ctcggtaacg tgcattactc cgggctgaag gatgcaaggt ggaatgaaaa
     2641 gtttgctgcc ggtatattga tcattggcat tattgcaatc ggtgtggcac cgttctggct
     2701 taacaacctg atcacaccgg gcaccgaaca cattgttgaa catggcattt catcgctaag
     2761 cctgaaatga actattaatt atggacgggt tgtcgttatt gatgaatatg aaatttgagt
     2821 ggatggtctt gctgatcatc ttcattctgc ttttcatgaa actgcagagc cgcgaatgga
     2881 agaccaccaa tgtacttatc gtgataaata ttttactatt ggcaaatttt ggtctcggat
     2941 ttttcatgaa caatgacgga acgttattcg gagatacatt cgttacaacc aaactgatcg
     3001 agctgcaaaa aaatattttg aacctcggcg ctctcatcat ctcaacacaa gcatattcat
     3061 ggctgcgaac gcataaacat gttttagaat tttacatgtt actgctctca actcttcttg
     3121 gaatgttctt gatgatatcg gccggcaacc tgctgatgtt ttatatcggt ctcgagctgt
     3181 caacgatacc gctcgccgcg ctttgcaatt tcgacctgga aaaacgccag tcatcagaag
     3241 cagcgatgaa gttgatcatt tcatccgcat tctcatcggg attactatta ttcggcattt
     3301 cactgttgta tggaactaca ggcacactcg attttacgca gctccctcaa cacttagatg
     3361 gaagcgcgct gcaattgttt gcctttattc ttttactggc agggtttgca tttaaaattt
     3421 ctgttgttcc atttcattta tggacggctg atgtttacga aggatcgccg gttcccgtta
     3481 cgtcttactt gtccgttgtt tcaaaagctg cgtttttgtt tgtctttgtt tcagtgctct
     3541 accatgtgtt caaaccaatt gctgacacat ggtataatat tcttttactg ctcagcgtcc
     3601 ttaccatgtt gactggtaac ctctttgcca tgcggcaaaa taatctcaag cgatttcttg
     3661 cattttcgtc tatcacgcaa atgggtttta ttcttgtggg catttcagga agcagtcaaa
     3721 taggagcggc atctgtggtt tattttttat tgatctacgt gttttcgaac ctcggtgcgt
     3781 ttggcgttgt tgcttttgtt agtgccgcaa ctggcaaaga aacgatggac gactacagag
     3841 gcttctacaa aacaaatcct ttcctggcgt gggtgctgac aatttcattg ttttcactgg
     3901 caggtattcc cccaacagcc ggtttttttg gaaaattctt tttgatcatg gcaggggcag
     3961 ggaaaggcaa ttatgtattc ataacgatcg cagcattgaa catgatcatt tcactttact
     4021 attacctgaa aattgtaaaa gcaatgttca tggatgcaaa tgagcagccg gttgaaaaat
     4081 tatttgttgg cggtttgcct aaattcgcaa tgctggtttg catggctggt gttctcgcaa
     4141 ttggatttat cccacaggtt tataattata tctattcgct gagtttcggt ttttaaagaa
     4201 caagtaacca gaaacctgca acctgaaacc tgcaacttga aacttatatt atggccatca
     4261 atcaaaatca tttatttgaa gaattaaacg gagtgaaatg tgggattgtt gaaaaaaatg
     4321 tttcgaaaga aagagctgat tttctcaaac acattctaga gtataacggt tatacggttc
     4381 taatcgttcc aggtgcgcca gcaaaaacgg ttcctccgaa acctgctcaa ccgggcgtta
     4441 ctcagacagt gcccgctccg gtaacaacaa ctgccgaaac agtacccgaa acaccggtcc
     4501 ctcctccacc cgaaactttt acagtgggcg ttactgatgt aacattcaat ccaatcaatg
     4561 caattttcgg aagattactg aaagcgcccg gcggacatat tgttacactt gcatactggc
     4621 atcaaaaaga aaaagatccg catgatgagg tgccatattt tgaaaacgaa aatcaataag
     4681 cgcatatctc ggtgagctac gttccctgat agtctgcaag tcgctgcaac acgaaacgta
     4741 acgacgcaac cgttgcccgg gcctccatgc aacaaatgaa tgttgcagta tttcttgatt
     4801 cccttgaaaa catttagcat gttgcgaact gcgaaaatgc aattcgaata atcttgtctt
     4861 tgccaaggcg cttaaacaaa tgtcttccga tgtgagataa taagcttatc tatgcccatc
     4921 aatcaaaaaa cttcttcact taaacgctct tgaaaattaa actaacgcat gagaacaaca
     4981 ctacaactaa ttgcagtatt tgcgtgctgc ctgctattaa acaaggtacg cgcaaacgaa
     5041 acagagccca acaatacatc cgcaaacgca aatacgcttg cattaaatag cagtaacacc
     5101 ggtgctgtta atgtcggtgc agacgcagat tggtggaagg tgacaaccaa tgcggatggg
     5161 aagcttaatg ttacgcttca aggcttgagt ggccgctata tgtctttaca tatttacgat
     5221 aacaatggca ctactgaatt catataccag gattatatca gcccaacaat tactctttct
     5281 gtagacgggc ttgcacccgg tacttactat attaaaatta attgcacaag tgtaacagac
     5341 accagcactt acaatatttc taattcactc acacttactg gcattaacaa cgacgcagaa
     5401 ccggatagca taaaagtgca ggcgctcagt cttcccctta acggttctaa aacgggccat
     5461 gtgggatatt attacaataa tcatcgtgac tctgtcgatt ggtataaagt aacaactaca
     5521 gcagatggcg agttagacgt ttcacttgct gtaaatacag gtggtcacta tatttccatt
     5581 aaattatatg ataacgatgg cgtctcttta ttggcctccc aggattatat ttctccttca
     5641 gcaaccatta aaactgatgg gctcgctgcg ggcacttact atataaaagt acactgtaca
     5701 ggcgtcaatg actttgatac ctatactttg aaagacacgc ttatcaaacc agcaatttca
     5761 actgacatag aaccaaatgc tactgcgaac caggcgctca ctctagccca aaacggatct
     5821 gcaacaggtc atgtgggtta ttattataac cactcgcgcg acaccgcaga ctggtataaa
     5881 gtaaccacta cttctgacgg agaactggat atcacacttg gctataatta cggcagtcac
     5941 tatatatcca tacacttgta tgacggtaac aaaactactc tgcttaatta ccaggattat
     6001 atcagccctt cagccactat aaaaaaagat ggactggcgg caggtactta ttatttaaaa
     6061 gtgaattgta caggtacaaa cgatttcgat acgtatactc ttaaggacac tttgaaattg
     6121 tatcattatg gcaatgatgc tgaaccaaac gctcggccat accaggcacg gacgttgcca
     6181 gcaaatacaa ctgttgcggg gcatgtaggc ttttatttta aaagcgtgaa agacaccttt
     6241 gatttctgga agatcaatta tacaggtagc ggcgccctta cgcttacttt aaatgcggac
     6301 ccgaataaac tagatggagg ttacaggtat atgtcgctac acgtttttaa agacacaaat
     6361 gcggctgaga tttattatat ggattatatc aatcctggcg ccggaacttt taccgtcaac
     6421 ttaaattctc ttacagcagg atattattac gtgaaagttt attgtacagg ttataacacc
     6481 gactttgaag cttacggcct tgggaatagt ttcggccaga tattaaacat tgcaaaaata
     6541 aaagcttcag attatgatac cgctgcaagc tgttcaaaca caaattatgt aagatttaag
     6601 tgcagcaacg gtacccctcc gtataaagtt atattgtatc gctatggtgt aatgtacggg
     6661 cagataaccg gaggtttagg ctctgtttat tttagctgga gtagcttgcc gccgggtgca
     6721 tattatgcca aggcttattc tgacggagct accggaaatg catttagcaa gagtcaaacg
     6781 attggtgtgg ttcctatacc gggtggcccc ttcacaacaa acattactgc tacacaggcc
     6841 aggcttaact ggacgccggt gtcttgctct aaacttgatt ctattcttgt ccgcgtgcac
     6901 ggcacgaata gttggtaccg gtaccaggta cccggtacat ctaccagtgc cacaatcagt
     6961 ggtcttcttt cgtctactgt atatgattgg aaagtagccg cagtggattc tgcaaacgga
     7021 attcttgcca ccggtgcctt taccagcctg gtaacattca caactgccgc agcattcgca
     7081 ggtacaggaa cagggcaaaa cgacgctgtt aaaatcactg ctaatgaggg gtcgctgtca
     7141 attcatacga ttccgaatcc ggcaaccaac agttttaaaa tacagttcgc ttcaacgatc
     7201 aatggtacag caagtgcaat attgatcgat atgaatggaa aaacagtgtg gtcatccggc
     7261 actgtgaata tttcttcttt gaatggcacg cttgtaaata ccaatcaaat taagagtggc
     7321 gtctattatc tgaggataat gaacgagcag ggaacactaa acgcaacgac aaaggtgata
     7381 atcgcccgat agaggaatcg aattattata gagcatcatc gcgaagatgc tgaggatgcg
     7441 aaatcatttt gtttttgcgt actcatgctt aggatgccat gttgttcctc gtccctcggg
     7501 gatcagatca aaaagattcc aaagaggcca tatggagtcg acatgccggc cgtcctgccc
     7561 ttcgtcctcg ggtgcaaaca aaagctccgt agcataaaaa tgaaatatgc cttccggtgt
     7621 tttacggaac acattcaacg ccggcaattg attcaacttt tcattttcac caaaataatc
     7681 tttgttgtaa ctattttttg cagatgaaag caagcgcacg tttttccatc cgcgactatc
     7741 agcccactgt ttaaattttt caatcgaagt tttggcgacg acagcaatgt tcacccgctg
     7801 ctctgcatga aacaccatgc catctatgcc gtcgatgatg gaattacaca ttacacacgg
     7861 cttctgattt tgcggcccaa acataaagct gtagataatg agcgattctt tgcccggctc
     7921 aaacaattca gaaagcttcg tttttttaat tgctccgttg ccgtccattt cttcaaacac
     7981 ataatcttcc tttaattttc caccgtttgg aagcttgcgc cgcatagctg ccacttcctc
     8041 cgtttgcctg cgcaaattta tttctgcttc gagcagttcg ttgcgtgcgt agcggtaaga
     8101 ttctgtttcg tttgggaatc ttttatcgtg atatgattcc atgttcgtaa ttgtgctgag
     8161 aaaatttgtt tgtaacctgc cacgtttaca aatcctgaca ggtatgttcg aaatgcacgc
     8221 tttcaatttt tgccataagc ccttaactga cctgacaggc gcgaagctcc tgtaacatct
     8281 ataaaagata atcagtgctg atttaaatcc aaaggcctca cccaaatatt cctgaagctt
     8341 agaggatcgc ttttgtctcc gtgagcctgc agtttgatcg gagacgcgcc gtgcggcgtg
     8401 taataagcat tcccaatgta gcgtgtttgt ccctttagtt caaaatcatt caggagcaaa
     8461 acaccattgt gaattacggt tacccttgcc ggtgaggcaa gattacgaac ggcatcgaag
     8521 cgtggcgcag tccagattat atcatacgtc tgccattccc cgggtttctt acaggcatta
     8581 gctaaaggaa taacctgctt gtatactgaa cctgtttgcc cattcacata agttttattg
     8641 ttgtaacaat taaggatttg tacttcatag cctgagtcgc cccttcctgt tgatgcgaga
     8701 aacacgccac tgttgccctt ttcttgtcct ttaaaatttg cattttcagg ctcccgccat
     8761 tcaagatgta attggtaatc cataaaacgc tgcttcgttt ctatattgcc acccttttta
     8821 tttacagtaa acacaccgtc agcaacggtc cagtcggccg gctgcgtggt gtcttttacc
     8881 gaacgccatg cgtcaagatt ttttccatcg aacaaaatga tagcgtccga cggcgcatcc
     8941 tgcggcgtgt tgcctggtgt gacgatcgga ggttcagggc tccatagttc tgttggcttt
     9001 gctttcaagg cattcgtgct gtcttcgata tgctttcgcc tgatgctgtc tgcgtcctgt
     9061 gctttgatta tcgtgaataa aagaacacag gtgatagttg caaagagttt tttattcatg
     9121 tcgtttttat tgtattattc ttccagggat ttgatatatc cgcatctcaa atcctgaaca
     9181 cgagtcattc ttttccgccg ttcattggtg ccaggcgttc caatt
//
LOCUS       DASQJI010000516         6114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_676370,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000516 DASQJI010000000
VERSION     DASQJI010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6114
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676370"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(530..1135)
                     /locus_tag="VEV83_14100"
     CDS             complement(530..1135)
                     /locus_tag="VEV83_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HYK46305.1"
                     /translation="MKTSKRILILTGDAGESFEVLFASHRLREAGYVPVIAAPAARML
                     NLVMHDFEPGWDTYVERKGYLVEAEISFAEVKTEDYEAVLIPGGRAPEYLRNDATVIK
                     IVKAFAESNKYIFAICHGVQILVTAGLVNQKNIACYEHVKFEVESCGGIYASNDEAVQ
                     DGRIITGKTWQSHPEFYRIVFSCLNATDKKFENRETLVNLS"
     gene            complement(1261..2772)
                     /locus_tag="VEV83_14105"
     CDS             complement(1261..2772)
                     /locus_tag="VEV83_14105"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK46306.1"
                     /translation="MKKLLCLVSAFITFCGNAQEWHLTGNSGTTTDTNFIGTTDNRAL
                     MFKVNNQRSGYIDFGSAKANTSLGFQALNNLTGSSNTAIGYKAMQSNTKGTGNVAFGT
                     NSMFRNTTGHHNVAVGDSSFYDSKTGSFNTAVGYLAMFRNVSGSENTAIGLDALHFNA
                     SGENNTAIGSGALYNNNIGYSNVAIGVAALYSSTTHHNIVAMGDSALYNNGVGSNDEF
                     DGNENTAVGSKALLNNTIGFGNTANGSWALTSNVLGSVNTAIGSNALSKTNSSWNTAV
                     GHSAGDTYDNGPDNVFVGAVARANAAGYSNVIAIGYGTTCTASNQVTMGNSTTTSYRA
                     YANWSNISDGRYKKNVRQDIAGLSFINKLRPVSYTLDARGIDKFLHKNFPAGGNVSAE
                     EVAMEKALSEKEQIRYTGFVAQEVEKAAKEIGFDFSGVDAAKNENDLYGLRYAEFVVP
                     LVKAVQELSKMNDEKESRLDTLEKQNADLKERLEKIEKILGQPITFNSSTPKK"
     gene            complement(3092..3331)
                     /locus_tag="VEV83_14110"
     CDS             complement(3092..3331)
                     /locus_tag="VEV83_14110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46307.1"
                     /translation="MKEDIDVIKEYNDIELDGLISECKNVTLTLSSMKIKKRTPEVKE
                     LLILRRNRFALIRKRAMELNLTEADLNSIHEYIQI"
     gene            complement(3507..3776)
                     /locus_tag="VEV83_14115"
     CDS             complement(3507..3776)
                     /locus_tag="VEV83_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46308.1"
                     /translation="MNSSQMLYKISNLQYSIRMKEAENVKAKTAGDQSNVELNNAALA
                     LLKSELATTVTEFNSIPLHSPATSAKGSRKLRWWQKLFQFQSRYQ"
     gene            4250..4441
                     /locus_tag="VEV83_14120"
     CDS             4250..4441
                     /locus_tag="VEV83_14120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46309.1"
                     /translation="MLKDAPLDAACLFTDIHYRNLFLLPGWNTTHTKEHNGHEGFHLK
                     FTSAIDDDHSKVHGNDRAI"
     gene            4572..5306
                     /locus_tag="VEV83_14125"
     CDS             4572..5306
                     /locus_tag="VEV83_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46310.1"
                     /translation="MHQQKFIRTLFYASLAVFFTSCNNGGSSTTSTDTTSTDTNSVTT
                     APENTVSTTPQNMMIAKHKVKDFAKWKASYDEHDSLRIASGVHSYVIGRGLQDSNTVL
                     VALKVDDMDKAKAFAKDPSLKQAMQKGGVMGTPSFSFVTMTFQDTAAINSDLRARSTF
                     QVKDWDAWQKSFEESKQERLDNGITVRAYGHDADDNHKVELVTAITDTAKAFAYYKSD
                     ALKQRRAAGGVVGEPNRFLFRVVQRY"
     gene            5842..>6114
                     /locus_tag="VEV83_14130"
     CDS             5842..>6114
                     /locus_tag="VEV83_14130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46311.1"
                     /translation="MLIEEKALKNWIDNFYGYGAWHAPFWFIDYEESGGDSREEVAEK
                     LNYFYHLQIADAPTLCDIRELYRHVAFRVEGPRALKFANLYDQRFGS"
BASE COUNT         1691 a         1345 c         1255 g         1823 t
ORIGIN      
        1 acaatgacag tattacctct tcttagtttt aatgttagtc gaatttcgca cagagggcgc
       61 agagctaaga gagtatattc tgcgttctat ctgtgtgtat ctgagtaaat ctgtgagaga
      121 aaaaaaatgc tcacggatgc cgcagattaa cacagatatt aagtcgatct tcctccctct
      181 gtttagccaa gccggtgata gcgctgcgta gtgaataggt aatggaaaaa atgagagtat
      241 tacctcttct taattttaat gttagttgat tttcgcacag agggcgcaga gctaagagag
      301 tatgttctgc gttctatctg tgtgtatctg agcaaatctg tgagagaaaa caaaagtttc
      361 tcaccgatgc cacagcttaa cacagatatc aaagtcgatc ttcctctctg tttactccgt
      421 gcgaaacaat aaaaaacatg tcgcacactt agagccacca ttcacgccag tcccgttaca
      481 taaccgcaaa ccggaaactg caaattctaa agtgcgctat cgcaaaccat catgacagat
      541 tgactaaggt ttcccggttt tcgaacttct tatctgtagc gtttaaacag ctaaagacta
      601 tccggtaaaa ttcaggatgc gattgccacg ttttgcctgt aataattctc ccatcttgta
      661 cggcttcatc attcgaagca tagatgccac cgcatgactc cacttcaaat ttcacgtgct
      721 cgtagcacgc aatgtttttt tgattgacga gccctgcagt caccaatatc tggacgccat
      781 gacaaatagc aaaaatgtat ttattacttt ccgcaaacgc ctttactatt ttaattaccg
      841 tggcatcatt tcgcaaatat tccggcgctc tgcctcccgg tatgagcacc gcctcatagt
      901 cttctgtctt aacttcggca aatgaaattt cagcctcaac aaggtatcct ttacgctcca
      961 cataagtatc ccagcccggt tcaaagtcat gcattacaag gtttagcatg cgcgcagcag
     1021 gcgctgctat caccggcaca taacctgcct cgcgcaggcg atgagatgca aaaagaactt
     1081 caaagctttc gccggcatct cccgtcagta ttagtattct ttttgacgtt ttcatatagc
     1141 ttttttacat gttcaaaagg atcttagtaa aggtatacaa gaaatatttc aaggaagatt
     1201 tctcttgtgc aagatttttg tactgcgcag ggacatgatg ggaagcttac agagactgag
     1261 ctattttttc ggagtactgc tgttaaatgt aattggctga cccaggattt tttcaatctt
     1321 ttccaaacgt tctttgaggt cggcattttg cttttcgaga gtatctaatc ttgattcttt
     1381 ttcgtcattc attttagaaa gttcctgtac cgccttcacg agcggtacaa caaattctgc
     1441 atacctcaat ccatatagat cattttcatt ctttgcagcg tctactcctg aaaaatcaaa
     1501 accaatttct tttgccgctt tttctacctc ctgcgcgaca aaacctgtgt accttatttg
     1561 ttctttttcg ctaagtgctt tttccatcgc aacttcctct gcacttacat ttccgcccgc
     1621 aggaaaattc ttatgcaaaa atttatcgat tccccttgca tcaagtgtat agctaacagg
     1681 cctgagcttg ttgataaaac tcaagccggc aatatcctgc ctcacatttt tcttgtacct
     1741 gccatcactt atgttactcc agtttgcgta agctctatac gaagttgtgg tgctattgcc
     1801 catcgttacc tggtttgatg cagtacacgt tgtcccatat ccgattgcga tcacattgct
     1861 gtaaccagcg gcgttcgcgc gggcaactgc tccgacgaac acattatcgg gaccgttatc
     1921 gtaggtatca ccggcagaat gacccacagc cgtgttccat gaagaattag tttttgaaag
     1981 cgcgttactg ccgatagcag tgtttacaga tccgagtacg ttggaagtaa gtgcccatga
     2041 accgttcgca gtgttgccga aacctatagt gttattaagc agggcttttg aacctacagc
     2101 ggtattttcg ttgccatcaa actcatcatt ggaacccact ccattgttgt ataaagccga
     2161 atcacccatc gcaacgatat tgtggtgcgt ggtgctacta tataatgccg caacgccgat
     2221 ggccacattg ctatagccga tattattgtt atacaatgct ccgctgccaa tcgctgtatt
     2281 gttttcgccg ctcgcattaa aatgaagtgc atcaagaccg attgccgtat tttcagaacc
     2341 gctcacattg cggaacatcg caagataccc gacagcggta ttaaaagaac cggttttgct
     2401 atcatagaac gaggagtcgc caacggcaac gttatggtga ccggtagtgt ttctaaacat
     2461 ggagtttgta ccgaatgcta cgttgccagt gccttttgtg tttgactgca tcgccttgta
     2521 tccgattgca gtattgctgc ttccggttag attatttaat gcctggaaac ccaaagaggt
     2581 attggcctta gcggagccaa aatcaatata gccagagcgc tggttgttta ccttaaacat
     2641 aagagctcta ttgtctgtgg taccaataaa gttggtatcg gtggttgtgc cggaattccc
     2701 ggttagatgc cactcctggg catttccgca aaaagtaata aatgcagata cgagacataa
     2761 taactttttc atacaacaga atttaggtta acaagctata caaaaaaatt cttttttgca
     2821 accgccttgc gcaggaatga gagcccggct tatctattgc gattatcgtt gttcttgcgc
     2881 ctagggatca gaccgtggcg tgacttaaaa atagatcatc atcctgccgc cacatagaac
     2941 ttgactgagc tgatcactat gttcacatgt agaaaaactc ttcgaggtat gctcagatgg
     3001 tcgcttatca agtgcgagcc agatttggag gccgttcgag accgggtata ttgctgtttg
     3061 tttgttagta acggaaggag attatcaacg tttaaatctg gatatattca tgtatactat
     3121 tcaggtcggc ttcggtcaaa ttaagttcca tagcgcgttt acggatcagg gcaaagcgat
     3181 tccggcgaag aatcaaaagc tcttttacct cgggagttcg tttttttatt ttcatactac
     3241 ttaacgtaag ggtcacattc ttgcactcgc ttatcaatcc atctaattca atgtcattat
     3301 attcttttat tacatcaata tcttctttca ttaattaagc tattaattgc tattcagctc
     3361 aaagaaataa tacaccgcat tcccggataa aaataactac agcaacagat cggccaccgc
     3421 atcaggaaat cttatgcgac ggtaaaaact ttcaagccag gcaggagagt aaacacctca
     3481 atgctcgcaa gacagtttat tattttctac tgataccggc tttgaaattg aaaaagcttt
     3541 tgccaccatc gtagttttct cgaaccttta gcactggtag caggactatg aagcggaatg
     3601 gaattaaatt ctgtaaccgt ggtagcaagc tcgcttttta agagtgccag ggctgcgtta
     3661 ttcaactcta cattactttg atcgcctgcg gtcttcgcct tgacgttttc agcttctttc
     3721 atacggatgc tgtactgtaa attcgatatc ttatagagca tttgactgct gttcataata
     3781 aggacaattg attagaaata ataaatttta caaccgcact catgtttaaa gcatggattg
     3841 tattatgctt tgccactgat gatcgctttt ttatcgctga tgttgcaaac cgcaagattt
     3901 aagagagatc acttttgaag aaagtacaag gaagaataat aaagtggtta cgcccttcga
     3961 aaattatatt cggttcacaa ataaacaatg ttggttctaa agataatctc ttttaatgac
     4021 aaaggtttaa ttatttaaac attactgctg caaacaatca ttcaaatcgt ctgaacgcgt
     4081 atacaactca cccatgcata ttatttttct tcattcgttt agcctgttaa tcgctatttc
     4141 cgttttcatc tctcttattc ttcttcatcg tgatcaattt cagaatttaa ccaggttcgg
     4201 taaacggctt gctgaatata tacgtattga gtagtagttc ataaactact tgcttaaaga
     4261 tgcgccgctc gatgcggcgt gtctgtttac agacatacac taccgaaatt tatttctttt
     4321 accaggatgg aacacaacgc acactaagga gcacaacggc cacgaagggt ttcacctgaa
     4381 atttacttca gcaattgatg atgatcattc aaaagtgcat ggcaacgatc gcgccattta
     4441 atttttcctt tatcggtcag tctcacaaca ccaacaaaag cgttggcgga attaatctga
     4501 tctggcattt attgtcttta tctttgttgt tctcccctac cctgtatttc ttaatctcta
     4561 aaatctacac tatgcatcag caaaaattta tccgcacgct cttttatgca tcgctggcag
     4621 ttttttttac ttcttgcaac aacggaggca gtagcacgac cagcactgat actacgtcga
     4681 cagacacaaa ttctgttacc accgcgcccg aaaatactgt tagcacaacg ccgcaaaata
     4741 tgatgatcgc aaaacacaag gtgaaggact ttgcaaaatg gaaggcttct tacgacgagc
     4801 atgattcgtt acgtattgca agtggagtac acagttatgt gattggccgt ggtttgcagg
     4861 attccaatac agtgctagtg gctttgaagg tagacgatat ggacaaggca aaagcatttg
     4921 cgaaagaccc aagcctgaaa caagctatgc aaaaaggtgg cgtaatgggc acgccttcgt
     4981 ttagttttgt tacgatgacc ttccaggata ctgctgctat caattcagat ctccgggccc
     5041 gaagcacgtt tcaagttaaa gactgggatg cctggcaaaa atcattcgaa gaaagtaagc
     5101 aagaaaggct ggataatggc ataaccgtaa gggcttatgg ccatgatgca gacgataacc
     5161 acaaggtaga actggtaaca gccataaccg atactgcgaa agcgttcgcc tactataagt
     5221 cggatgcgct gaagcagaga agagcagcag gcggcgtggt aggcgagcca aaccggtttc
     5281 tgttcagggt ggtgcagcgc tattgaaata aattgagaca tgataccaaa gatgaagtat
     5341 gtgcttcatc ttttttttct acgcagtgat gtggaatctg tgttgattgg atgaaaatct
     5401 ttgagatttg cacgtttgtt atttagaatt ttaagaatga gaatattttt tggacaaacg
     5461 cttttttgta cttcgatgac gcaggcctgt gccgctactt tggtagtagc ctaaacgatt
     5521 ttactgacca tcgatatttg tgcagagaaa gaaagttcgt gttctatttt tatgaggtcc
     5581 cgggtcccga acattgtgca cgatcagcgt gttctttgtc ccgcttggtg ttcgttgtga
     5641 ccagagggaa cacaacgatc acgaacaacc acaacggccc gaaggattac cttctatcat
     5701 cgggtgagta cgaaaaaatt tgcaagtcaa gaaatcgttg tgtctttgtg cctcgctgcg
     5761 ggttcgtcgt gctacaagaa ccttcaacat ctcatccgac aacttccatt tcaaagatgg
     5821 taccttttat tatctttcct catgctgatt gaagaaaaag cgcttaagaa ctggatcgat
     5881 aatttttacg gatacggagc gtggcacgcc ccgttttggt tcattgatta cgaagaaagt
     5941 ggcggcgact cacgtgaaga ggtagccgag aaactcaact acttttacca tttacaaatc
     6001 gctgacgcgc ccacactttg cgacatacga gaattatacc gtcatgtcgc atttcgcgtg
     6061 gaagggccga gagcgttgaa atttgcaaac ctctacgatc aacggttcgg ttcc
//
LOCUS       DASQJI010000517         2934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2826926,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000517 DASQJI010000000
VERSION     DASQJI010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2826926"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VEV83_14135"
     CDS             <1..346
                     /locus_tag="VEV83_14135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HYK46312.1"
                     /translation="VYAHAEEGMKINMMRENPHVCFEVDTIENMGNWKSVIGWGDYEE
                     LTEETERALAINVLLNRGIPKGASKTSYLTPEWPFHSKSAADIEGIVFRIKLNIKTGR
                     FERGDTVSHNLA"
     gene            574..1044
                     /locus_tag="VEV83_14140"
     CDS             574..1044
                     /locus_tag="VEV83_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HYK46313.1"
                     /translation="MNMELDAIDRQILKLMQDNARISNSDLARALKMAPSAVLERVKK
                     LEQKKIITGYVTRIDPAAVQKKLLAFIFLRSSEGFASDTKTADALSKIPEVQEVHHIA
                     GEDCFLIKVRTEDSASLMNLMRNSLKKIPNIASTKTTIVLETVKEQTQLVIPKK"
     gene            1049..2041
                     /locus_tag="VEV83_14145"
     CDS             1049..2041
                     /locus_tag="VEV83_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HYK46314.1"
                     /translation="MLVTQKKDASTVMVIIAFAAVYLVWGSTYFFIQKALQHIPAFLL
                     GFIRFTAAGILLLTWCVIQKEKIWDWRIIKHAALSGVLMLFLGNGAVIWAEQSLPSSL
                     VAVLVSAAPLWFVLLDKPKWKINFRSRPTLTGLVVGFAGVVMLFSESITKAFSSNNAL
                     QFAGLLILIIGSTSWAGGSLYAKYNSKGSTSVNSAWQMIAAGIAFLPGTFMTKELNGF
                     QWQSVTATSWLSLFYLILFGSLAAYSAYVWLLQVRPATQVSTYAYVNPVVAVLLGVFF
                     AGESMSWLQVSGLTIVLLSVLLINIARYRHDRRATLKTAKKVVAPVEKHAVCTG"
     gene            complement(2116..>2934)
                     /gene="solA"
                     /locus_tag="VEV83_14150"
     CDS             complement(2116..>2934)
                     /gene="solA"
                     /locus_tag="VEV83_14150"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HYK46315.1"
                     /translation="ERYQIWYEELDGKAISKRFPAFKPAQATVAVYEKNAGLLYPEAC
                     VRAHLTLAQKTNADLHFNEEVTTITTRNGLIEIRTDKEIYLAEKIIVSAGAWVTKLFP
                     ELHLPLKVARQVLMWFDFESSRPENFLPEKMPVYIWEYAPNKIFYGFPALENKLKVAI
                     HHGGAITDPDTIDRAVHDDEIKQLIDIISQFLDAQVKFSHAAVCMYTNTPSEDFIIDH
                     HPQNKNIIIASPCSGHGFKFSSAIGKLLCDMVCERRLDFDISLFSIERQMTVER"
BASE COUNT          816 a          622 c          663 g          833 t
ORIGIN      
        1 cgtttacgct catgcggaag aaggcatgaa aataaatatg atgcgggaga acccgcatgt
       61 gtgcttcgag gttgacacga ttgaaaatat gggcaactgg aaaagcgtaa taggctgggg
      121 cgattatgaa gaactgaccg aggaaacaga acgtgccctc gccataaatg tcttactcaa
      181 taggggcata cctaaaggtg ccagtaagac ctcgtactta acacctgagt ggccatttca
      241 ttcaaaaagc gcagccgata ttgaaggcat cgttttccgt ataaaactca atatcaaaac
      301 tggccgtttc gaaagaggcg acacggtttc ccataacctt gcctgaatta tctggcgtct
      361 ttcccaaaaa gcggacccgt tcaaatttct cttactacca ttgattttac tcaaaatcgc
      421 ataattactt gtggaattaa gaaacatctg ccccggcggg ggtaaatggc catctttcag
      481 ataatgcaac ctctccaaat aaaattctaa atatatactt aaaaacagaa ttttattctg
      541 aattcatgta catttacaga aaattaattt gaaatgaaca tggagctgga tgctatcgat
      601 agacaaatac tcaagttgat gcaggacaat gcccgcattt ccaactcaga tcttgcacga
      661 gcgttaaaga tggctccttc cgctgtgttg gaaagggtaa aaaagctcga acaaaagaag
      721 atcatcactg gttacgtaac gaggatcgac ccggcggccg tgcagaaaaa attgctcgca
      781 tttatttttt taagatcgag cgaaggcttt gcgagcgaca cgaaaaccgc tgatgcgtta
      841 tcaaaaattc ctgaagtgca ggaagtgcat cacatagcgg gcgaagattg ttttttgatc
      901 aaagtgcgca ccgaagattc tgcttcgctc atgaatctga tgcgtaattc tttgaagaag
      961 atcccgaaca tagcatcaac aaaaaccact atcgttttgg agacggtaaa agaacagaca
     1021 caattggtca ttcctaaaaa gtaaacctat gctcgttaca caaaaaaaag atgcgtcgac
     1081 ggtgatggtg atcattgcat tcgcggcagt ctacctcgtg tggggctcga cttatttttt
     1141 tatccagaag gcacttcagc atatacccgc ttttttactt ggcttcatac ggtttactgc
     1201 agcgggaatt ttgttactaa catggtgtgt tatccaaaag gaaaaaattt gggattggag
     1261 gattataaaa catgcggcac tgagcggcgt attgatgctg tttctcggta atggcgctgt
     1321 aatatgggca gagcagtcgt tgccgagttc actggtagca gtgcttgttt ctgctgcgcc
     1381 gttgtggttt gtgcttctcg ataaaccgaa atggaaaatc aatttccgca gccggccaac
     1441 cttaaccggc ctcgttgtcg gttttgcagg cgtggttatg ctcttcagtg aaagcatcac
     1501 aaaagctttt tcatcgaata atgcgttaca atttgccggc ttattgatct taataattgg
     1561 ctcaacaagt tgggccggtg gttcattata tgctaagtac aattcgaaag gctctacctc
     1621 tgtgaacagc gcatggcaaa tgatagcagc gggaatcgca ttcctgcccg gaacatttat
     1681 gacaaaagaa ttgaacggtt ttcaatggca atcagtaacc gcaacgtcat ggctttcgct
     1741 tttctatttg atattgtttg gatcattagc tgcgtacagc gcatatgtgt ggttgttgca
     1801 agtgcggccg gccacccagg tgagtacata tgcatacgtg aatcctgtcg ttgcagtgtt
     1861 actcggcgtt ttctttgccg gcgaaagcat gagttggctc caggtaagcg gattgacaat
     1921 cgtattgttg agcgtgctat tgatcaatat tgcgagatac aggcacgaca ggagagcaac
     1981 tttaaagacg gcaaagaaag ttgttgcccc tgtggagaaa catgcggtgt gcacagggta
     2041 attagtttgc agatgacaga tgacggatgg cagttgacaa ataaccgtta acactcaacg
     2101 gtcatctccc aaatgtcatc tctcaactgt catctgtctc tcaatgctga acagcgaaat
     2161 atcaaaatca agccttcttt cgcaaaccat atcacaaagt aattttccta tcgcacttga
     2221 aaatttgaat ccgtgcccgg aacaggggct ggcgataata atgtttttgt tttggggatg
     2281 atgatcaatg ataaaatctt cggatggggt attggtgtac atgcaaactg ctgcatggct
     2341 aaacttcact tgcgcgtcca gaaattgaga gatgatgtcg attaattgtt tgatctcgtc
     2401 atcgtgcacc gcccggtcga ttgtatcggg atctgttatc gcacctccgt gatgtatagc
     2461 aacctttaac ttgttttcca atgcgggaaa accgtagaat attttgttgg gcgcgtactc
     2521 ccatatgtac accggcattt tttccggtaa aaaattttca ggacgactgc tttcaaaatc
     2581 aaaccacatc aacacttgcc gtgctacttt caggggaaga tgcaattcag gaaacaattt
     2641 tgttacccag gcccccgcgc ttactatgat cttttcggct agatatattt ctttatctgt
     2701 gcgaatctca attaatccgt ttctagtagt tattgttgtt acttcttcgt tgaaatgaag
     2761 gtcggcattc gttttttgtg ccagcgtcaa gtgcgcgcgg acacatgctt ccggatatag
     2821 cagccccgca tttttttcat aaacggccac cgttgcctgt gcgggcttaa atgcaggaaa
     2881 tcttttactg attgcttttc catctaactc ctcataccaa atctggtatc gttc
//
LOCUS       DASQJI010000518         3469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2521043,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000518 DASQJI010000000
VERSION     DASQJI010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521043"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..2091
                     /locus_tag="VEV83_14155"
     CDS             91..2091
                     /locus_tag="VEV83_14155"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYK46316.1"
                     /translation="MKKYFRYFNLLLSFFLLSQALGQLKYWSPEEYMKMKNVTAVRPS
                     PDGKKVLYTVREAMMTAERSDYVNRIYVANIDGSDTIQLSRGDKNSANPKWSPDGQWV
                     AFTSDRDGKNNLYVLPLHGGESEKVTDVKTSVGEFEWSPDGKSIAFIMGDSSTADEEK
                     NKKEKNDWYFQDEDIKQNRLYVLSVNDKDNTGKRVQTLLTREDRNVNDFSWSPDSKLI
                     AYDFGKTPLVGDNVNFGDIAIVNVSSRESKLIANTGAAEGNPKFSFDGNWIAFECTED
                     PVVWGGRSHIKIVSVQGGTPSMLAETPDLQPTLLGWSSDDKHVYVAEASKTLTAIYSL
                     GTDSKQISAWSKASADVITLPYLNSTGNYFGFVLQNASTAGQGFVSSAISFLPQKITN
                     INADIAQKPIPKTEVVKWKSADGKEIEGLLTYPLNYIQGKKYPLILNIHGGPAGVFSQ
                     SFVASNQSVYPIAAFAEAGYFVLRCNPRGSSGYGADFRLANQRDWGGEDFKDLMAGVD
                     HVIAMGGVDANKLGVCGWSYGGFMSSWVVGHTDRFKVASIGAPVVDLTSQDLTDDIPG
                     FLTSYMRKDPWNDYDVYDAHSPLHFVGNVKTPVLLQHGDADIRVPFSQGIMFYNALKR
                     RNVPVRMLVLPRQPHGPTEPKMIREAMQSNLDWFQKYFGPTI"
     gene            2165..2620
                     /locus_tag="VEV83_14160"
     CDS             2165..2620
                     /locus_tag="VEV83_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK46317.1"
                     /translation="MKRYASVIGCLFLLAFNAKAQSAEDSVKTTINKLFAAMKNGDSK
                     ALVECFSDSAILQTVAEKNGNVSIQTEPVKDFADFVGTQKEGDADERITFDMLRVDGA
                     LAIAWTPYKFYYKGNFSHCGVDSYQLVRINGTWKIQYLIDTRRKTNCGE"
     gene            2919..3467
                     /locus_tag="VEV83_14165"
     CDS             2919..3467
                     /locus_tag="VEV83_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46318.1"
                     /translation="MKKYLFVSFALCVSFFSCKKDSESPTPQTTFQLKLNGTLTTFNI
                     NSATLIRSTATDEKRLDIVGTSEDGQTVFVLTVGEETASGDGVSVGQHDVRLFNDDNP
                     DTPEDESIDTDAYVTLSFYSGSTLITDTYAENGDITITGNDEGAHTVSGNFQQTLASL
                     TGGTDYTISEGSFNNIQYTVVN"
BASE COUNT         1022 a          695 c          812 g          940 t
ORIGIN      
        1 ttgaccgggc atccaaattt tttgcttctt tctatcaaaa actatttctt cgtttttaaa
       61 taacttatca ttccttctaa atcaactgcg atgaaaaagt attttcgtta tttcaatttg
      121 cttctttctt tctttttatt aagccaggct ctcggtcaac tcaaatattg gagtccggaa
      181 gagtacatga aaatgaaaaa tgttaccgcg gtcaggccgt cgccagacgg taaaaaagtt
      241 ttgtacacgg tgcgtgaagc gatgatgacc gccgaacgca gcgattatgt aaacaggatc
      301 tacgtggcaa acatcgatgg cagtgatacc atacagcttt cgagaggcga taagaattct
      361 gctaatccaa agtggagtcc cgatgggcaa tgggtagcat ttacaagcga ccgcgatggt
      421 aaaaataatt tatacgtttt gccattacac ggcggagaaa gtgaaaaggt aacggatgtt
      481 aagacgtcgg tcggtgagtt tgaatggagc cccgatggca aaagcatcgc atttattatg
      541 ggcgattctt caaccgcaga cgaagaaaaa aataaaaagg aaaaaaacga ctggtacttt
      601 caggacgagg acataaaaca gaaccgcttg tatgtattgt ccgtaaatga taaagacaac
      661 actggcaaac gtgtacaaac gctgttgacc agagaagacc ggaacgtgaa cgacttcagt
      721 tggagccctg acagcaaatt gatagcctat gattttggta aaacgccgtt ggtaggagac
      781 aacgtaaact tcggcgacat tgccatagta aatgtaagta gccgcgaaag taagttgata
      841 gcgaatacgg gagcggcgga aggaaatccg aaattcagtt tcgatgggaa ttggatcgct
      901 ttcgaatgca ccgaagatcc ggttgtgtgg ggtggaagat ctcatataaa gatcgtgtcg
      961 gtgcagggag gcacgccatc aatgcttgca gaaacacccg atcttcaacc tacattgctg
     1021 ggttggagca gcgatgacaa acatgtatat gtagctgagg ccagtaaaac gttgaccgca
     1081 atttattcat tgggcactga tagcaaacag atatctgcct ggagcaaggc gtcggccgat
     1141 gtaataactc ttccatatct caatagcacc ggcaattact ttggttttgt acttcaaaac
     1201 gcttcaacag ccgggcaggg gtttgtaagt tcagcaattt cttttttgcc gcagaagatc
     1261 acgaatatca atgctgatat tgcgcagaaa cccattccga aaactgaagt cgtaaaatgg
     1321 aaatccgctg atggaaaaga aattgaagga ttgcttactt acccgctgaa ttatatccag
     1381 gggaaaaaat atcccctcat cttaaatata catggaggac ccgcgggcgt ttttagccaa
     1441 agctttgttg cttccaatca gtctgtttat ccgatagcgg catttgctga agctggatat
     1501 tttgtgttgc gttgtaaccc aagaggttct tcaggctatg gtgcagattt tcgtttagca
     1561 aatcagcgcg attggggcgg agaagatttt aaagacctga tggccggagt tgatcatgtg
     1621 atcgctatgg gcggtgttga tgcaaataaa ctgggtgtgt gcggatggag ctatggcggc
     1681 tttatgagca gttgggtagt cggccataca gatcggttta aagtcgcatc gatcggtgcg
     1741 cctgttgttg atctcacgag ccaggaccta accgatgata ttcccggttt tctcacgtct
     1801 tacatgcgga aagacccgtg gaatgattat gacgtttatg acgcgcattc gccactacat
     1861 tttgtcggca atgtaaaaac gcccgtgcta ttgcagcatg gtgacgcaga tattcgcgtt
     1921 ccttttagcc aggggatcat gttctataat gcactgaaaa gaaggaatgt tccggtaaga
     1981 atgttggtat tgccacgaca gccacacgga cctactgaac cgaagatgat cagggaagca
     2041 atgcaaagca atctcgactg gtttcaaaaa tatttcgggc caacgatata aatgtgtgct
     2101 tcagtttcga tccatgagtt ttctcgcgag ggcatcatat ttttatgtac ataaaaattt
     2161 ttgcatgaaa agatatgctt cagttatcgg ctgtttgttt ttattggctt ttaacgcgaa
     2221 agcccaatca gcagaagact ctgtaaagac tacaataaat aaattatttg ctgccatgaa
     2281 aaatggcgat agcaaagcgc ttgttgaatg cttttctgat tcagccatat tgcaaacagt
     2341 cgcagaaaaa aacggaaatg tttcgataca gacagagccg gtaaaagact ttgcagattt
     2401 tgttggcacg caaaaagaag gcgatgctga tgaaagaatc acttttgata tgctaagagt
     2461 ggacggagct cttgcgatcg catggactcc ttataagttc tattataaag gcaactttag
     2521 ccattgcggc gtcgactcat accagcttgt tcgcataaat ggaacttgga agattcaata
     2581 ccttattgat accagaagga agacgaactg cggtgagtga tcgatgagtg tttgtgacgg
     2641 ctttagctta cttgttcttt tcgcgcgttg gccgccgatt attatgacgc tggcaaaact
     2701 gatcgcccaa actttcccgg atatagaaaa aggataatac agctattact cgtgcgatcg
     2761 aggagacttt atttttcgcg ctggctttgg ggattgatca tttgtttcag agggccgcct
     2821 acaccttttt aaaaaaattt gcagcggcgt agtgaagaaa ctatttttga gccctgatcg
     2881 ctaaattttt aaaaaattaa tcaactcaat tactgtttat gaaaaagtat cttttcgtat
     2941 cctttgcact ttgcgtttca tttttttcgt gtaagaaaga ttcagaatcg ccaacgccgc
     3001 agactacctt ccaattaaaa ctaaacggca ctcttaccac tttcaatatc aattcagcaa
     3061 cattaattcg atccacagca actgacgaaa aaaggcttga cattgtcggt acttcagaag
     3121 atgggcagac ggtctttgtc ttaaccgtcg gtgaggaaac agcgtccgga gatggtgtct
     3181 cagtcggtca gcacgatgta cgtctgttta acgacgataa cccggacact ccggaagatg
     3241 aaagcataga cactgacgca tacgtaacat tatcatttta ttcgggcagc acgttaataa
     3301 cagacacata tgcagagaac ggtgatatca ccatcactgg caatgatgaa ggcgcccaca
     3361 cagtgtccgg aaattttcag caaacgcttg caagcttaac cggcggcact gattatacga
     3421 tttcagaagg ctcgtttaat aacatccaat acactgtcgt aaattgacg
//
LOCUS       DASQJI010000519         3375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_523490,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000519 DASQJI010000000
VERSION     DASQJI010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523490"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VEV83_14170"
     CDS             complement(<1..212)
                     /locus_tag="VEV83_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46319.1"
                     /translation="MFKNHFKLAWRNLVKNRQVTLLNLIGLSTGLACVILILLWVADE
                     VNINKFNQNDDRLYQVEQVTSDGNAA"
     gene            complement(356..2797)
                     /locus_tag="VEV83_14175"
     CDS             complement(356..2797)
                     /locus_tag="VEV83_14175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46320.1"
                     /translation="MFRNYFKTALRNLSRHKNYAIINIAGLAVGIAICIAIFVLIQFE
                     TSFDDFHSKKDRIYRVLTEYHHADAPTFYGKGIPYPMPVGLKTTFPQVEAVAPVYGDH
                     NDQVLILDDNGATVKKFKEESGVFFTEPSFFKIFDFPLLAGSYTSLKDPNNVLLTKET
                     AEKYFPQEAAHGDWEKVLGKTIKLRSYSTDLVKVSGILATIPANTDFQFKLVVSYGTG
                     FTESYFAKSKDWDGTSSDFGCFVLLPSNISVDNFNQQLRAYSKKVESADNKDSHIIQP
                     LGAIHYDTKTGDYSNKTISHQLINVLWLIAAFILLIACINFVNLSTAQAVNRAKEIGV
                     RKVLGSNRWQLKFQFLIETFLIVLTAVVFAVVISYLVLPFLNSSLELSLSLSLSQNPG
                     IILFLLMITVAVTALAGFYPSIVLSRFNPVTALKSKLTMSNVKGISLRRGLVVFQFII
                     AQSLIIGTLIILKQMNYFVNQPLGFDTNAVVNVPFPGDSLGLTKVNYVRQQLSNISGI
                     QQVSFSSNTPVEDDNDNWTTLRFDHAIKETDFYAIVKFADNQYIPTYKLPLIAGRNLE
                     PSDTAREFVVNELLLKNLGITDPRKILNKEISIWGDNLKGSVVGVLKDFNDRSFRRDM
                     APLVLTTFNRMYTQVGIKITGTNMPSTMQSIEKVWNQTFPDFVFEYKFLDDKVESFYK
                     QESQLSQLYKIFAAIAIFLSCLGLYGLASFMAAQRIKEVGIRKVLGATAGNIVYLFSR
                     EFVVLIAIAFVIAAPIAWYFMHRWLQDYVYRIDISWWIFILGGFASIIIALATVSFQA
                     IRAAVANPVDSLRTE"
     gene            complement(2935..>3375)
                     /locus_tag="VEV83_14180"
     CDS             complement(2935..>3375)
                     /locus_tag="VEV83_14180"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK46321.1"
                     /translation="FEYEFMDEKFQSLYRSEMQLKTAADIATVLNLVIIFLGIFGVVT
                     FTLIKRTKEIAVRKVLGAGVSNIIILFTKDYAWLILIANLIACPVTYMITNKWLQGYA
                     YRVNQAASPYLIVCGVVFIAAFLMIAIQCIKAAVANPVKSLRTE"
BASE COUNT          991 a          764 c          675 g          945 t
ORIGIN      
        1 attgcagcat taccatcgga agtcacttgc tccacctggt aaagccggtc atcattttgg
       61 ttgaacttat ttatattcac ctcatctgct acccataata agatcaatat tacacaggct
      121 aacccggttg atagcccaat aagattgaga agagtgacct gcctgttctt taccaggttc
      181 cgccacgcca gtttaaaatg atttttgaac atcgcatttt gatttacgat ttacgaatta
      241 caatttacga ttgcagattg cagatttgga gaagactggc actcgtcaaa cctcaaactt
      301 caaacctcaa acctcaaacc tcaaactcat tactcattat tcattactca tctcatcact
      361 ccgtccgcaa actgtccacc gggttcgcca ccgctgccct gatcgcctgg aagctcactg
      421 ttgccaaagc gatgatgatc gatgcaaagc cgccgagaat aaagatccac cagctgatgt
      481 caatacgata cacataatcc tgcagccacc ggtgcatgaa gtaccatgcg atcggcgccg
      541 caataacaaa agcgatggcg atgagtacta caaactctct cgaaaacaag tacacaatat
      601 tgccggcggt tgcacccaat actttgcgaa tgccgacttc ttttattcgt tgtgcagcca
      661 tgaatgaagc caaaccatat aatccgaggc aactaaggaa gatggcgatc gctgcaaaaa
      721 ttttgtacaa ctgcgacagc tggctttcct gcttataaaa actttcgact ttgtcatcga
      781 gaaatttata ttcaaacaca aaatcgggaa atgtttgatt ccatactttt tcaatggact
      841 gcatcgttga cggcatgtta gtaccagtga tctttatacc aacctgggtg tacatcctgt
      901 taaacgtggt gagcaccaat ggcgccatgt cacgccgaaa agacctgtcg ttaaaatcct
      961 tcagaacgcc gaccacagag ccttttagat tgtcacccca aatactgatc tctttattta
     1021 atatttttcg cggatctgta attccgagat ttttcagcag caattcgtta acgacgaact
     1081 ccctggctgt atcagaaggt tcaaggtttc ttccagctat gagcggcaac ttgtacgtgg
     1141 gtatgtattg gttgtctgca aattttacga tcgcataaaa atccgtttcc tttattgcat
     1201 gatcaaaccg caatgtggtc cagttatcat tatcatcttc aacaggtgtg ttggaactga
     1261 aactcacttg ctgaattccg ctaatgttcg acaactgctg gcgtacataa ttgaccttcg
     1321 taagacctaa actatctccg ggaaagggaa cattaaccac ggcatttgta tcaaaaccta
     1381 acggttggtt gacgaaataa ttcatctgct ttaaaatgat caatgtgcct atgatcagcg
     1441 actgcgcaat gatgaattga aacaccacca aaccacgcct taatgaaatt ccttttacgt
     1501 tgctcatggt gagcttgctc tttaaagcgg taaccgggtt aaatcgtgac aaaacgatcg
     1561 aaggataaaa cccggccaat gcggttactg cgacagttat catcaacagg aataaaatga
     1621 tcccagggtt ttgagacaga ctaagagaaa gtgataattc taaactgcta ttcaaaaagg
     1681 gcagcacgag atacgagatc acaacggcga aaacgactgc agttagtact attaaaaaag
     1741 tttcgataag gaattgaaat ttcaattgcc agcgattgct gcccaatacc tttctaacgc
     1801 cgatctcctt tgcgcggtta actgcctgcg ctgttgacag gttgacaaag ttgatgcagg
     1861 cgatcaacaa gataaaggcg gcgatgagcc ataacacgtt gatcagttga tgactgatcg
     1921 tcttgttgct gtagtcaccg gtttttgtat cgtaatggat agcgcctaat ggttggatga
     1981 tatgactgtc cttattgtca gctgattcca cttttttcga atatgcgcgc agttgttgat
     2041 taaaattgtc cactgaaata tttgacggca acagaacgaa gcatccaaaa tctgacgacg
     2101 tgccatccca atctttcgac tttgcaaaat agctctcggt aaaaccggta ccataagaaa
     2161 caacgagctt gaattggaag tcggtgtttg cagggatcgt tgccagaatg cctgaaactt
     2221 tcacgagatc ggtgctatat gaccttagct ttattgtttt tcccaaaacc ttttcccagt
     2281 caccatgcgc agcttcctgc ggaaaatatt tttcggcggt ctcttttgta aggagcacat
     2341 tattgggatc tttcagtgat gtataagatc cggcgagtaa tggaaaatca aaaattttaa
     2401 agaaagaagg ttctgtgaaa aagacgccac tctcttcttt gaactttttt acagtcgcgc
     2461 cattgtcgtc aaggatgagc acctggtcgt tgtggtcgcc gtaaaccggc gcaaccgctt
     2521 ctacttgagg aaaagtagtt ttcaatccga caggcatcgg ataaggtatt cctttcccgt
     2581 agaacgttgg agcatccgcg tgatggtatt cggtcaatac gcgataaatg cgatcctttt
     2641 tcgaatgaaa atcatcaaag ctggtttcaa actggatgag tacgaatatg gcaatacaaa
     2701 tagcaatacc caccgctaag cctgcaatgt tgatgattgc ataattctta tgccgcgaca
     2761 aattgcgcag cgcggtcttg aaataattac gaaacataga aaacctccgt ccattttacg
     2821 atttacgaat tacaatttac aattgcagat tggcgattgc agattatgtt cacaattcag
     2881 aaattcacca ttcacgatct ctccctcatc actcattatt cattactcat ttcctcattc
     2941 ggtccttagc gatttcaccg ggtttgccac cgctgcctta atacattgta tagcgatcat
     3001 aagaaatgcc gctataaaaa caaccccaca tacaatgagg tatggcgatg ctgcctggtt
     3061 caccctgtaa gcatagccct gcaaccactt attagttatc atataagtga cagggcacgc
     3121 gattaaattg gcaatcaaaa taagccacgc ataatctttt gtaaaaagta taatgatatt
     3181 ggagacgcct gcacccagta cttttcttac tgcaatttct tttgtgcgtt tgatgagcgt
     3241 gaaagtaaca acaccaaata tgcccaggaa aataatgaca agattcagta cggtcgcaat
     3301 gtcagcagcg gtctttaatt gcatctcgga gcggtacagt gactggaatt tttcatccat
     3361 gaattcatat tcgaa
//
LOCUS       DASQJI010000520        12625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1906726,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000520 DASQJI010000000
VERSION     DASQJI010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12625
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906726"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..522
                     /locus_tag="VEV83_14185"
     CDS             268..522
                     /locus_tag="VEV83_14185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46322.1"
                     /translation="MNTSIKTALAAIGLLVAFSCKKENSDRQLRMDDYDATDIVAGKY
                     IAVRMGKQVVETVVASHRMLTRRPLTERISDLTAMIVTSS"
     gene            599..1297
                     /locus_tag="VEV83_14190"
     CDS             599..1297
                     /locus_tag="VEV83_14190"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK46323.1"
                     /translation="MNTTIKTGLAIFLLAISCKKEGADLPSNTSDDVSNMAAGKYPIV
                     KIGTQKWMGTNLNVAKYRNGDKIPQVADPTKWAGLHKGAWCWYNNDSATGAVYGRLYN
                     WYAVHDSRGLAPLGWHIPSDTEWTTLSTYLGNNPGGKLKDTGTIEAGTGLWYYPNTGA
                     TNSSGFKALPGGHRLPTGSYFHIGTYGNWWSSTQVDTANAWNRTLSNQNGSVGSSYHA
                     LQSGFSVRCIKDSI"
     gene            1659..1982
                     /locus_tag="VEV83_14195"
     CDS             1659..1982
                     /locus_tag="VEV83_14195"
                     /inference="COORDINATES: protein motif:HMM:NF021143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FISUMP domain-containing protein"
                     /protein_id="HYK46324.1"
                     /translation="MEWDTLVGYLGSTNAGGKLKETGTIEAGTGLWYAPNIGATNSTG
                     FSGVPGGYRDGAFYGLGSYCYIWTSTEYEASAARYRLLYYDARNVLKGTTAEFIGFYV
                     RCVKD"
     gene            2096..2770
                     /locus_tag="VEV83_14200"
     CDS             2096..2770
                     /locus_tag="VEV83_14200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK46325.1"
                     /translation="MNTTIKTALAAFLFFALSCKKENIKSTVTDNDISEMVSGKSVVL
                     IGTQTWMAKNLSVSRYRNGDKIPQVKDSATWATLTTGAWCWYNNDSSTGAVYGKLYNW
                     YAVNDPRGLAPTGWHVATDSEWYVLANFLGPGAGGKIKETGTTHWFDPNVDALNSSGF
                     TGLPGGYRSEIGQFCYIRYLGLFWTATGYSSSVAWYRRLLCYSNFLDYWRFPKQMGFS
                     VRCIKD"
     gene            2819..3505
                     /locus_tag="VEV83_14205"
     CDS             2819..3505
                     /locus_tag="VEV83_14205"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK46326.1"
                     /translation="MKITFTSCVVLMLLSISWTKQNGSIRSSAIGDENSTQPNNIASI
                     TIGSQVWMEKNLDVSRYRNGDKIPQVKDSATWATLTTGAWCWYNNDSSTGVVYGKLYN
                     WYAVHDPRGLAPIGWHVPSDSEWFVVYNFLGTNAHNAGGKMKETGTTHWLDPNVNAIN
                     SSGFTAPGGGYRDNLGQFAYLNFLGYWWTSTSNGIRYAFCRRLVSYGGFMDRMSYENG
                     KGFSVRCVKD"
     gene            complement(3569..5530)
                     /gene="ligD"
                     /locus_tag="VEV83_14210"
     CDS             complement(3569..5530)
                     /gene="ligD"
                     /locus_tag="VEV83_14210"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HYK46327.1"
                     /translation="MLCTLVAKPFTAPGWIYEVKWDGYRIIAYKNGKNVTLRSRKGLD
                     YTARYAVVSNAIKKITGDFVIDGEVVAFDEQGKVNFDLVQKANPDAPLAYYVFDILWK
                     DGSSLMNRPLSERKTILEKALPKTGIIKYSASFTDGIALFEQAKKMELEGIIAKREDS
                     VYVPDKRGGDWLKITTKRRQEFVIGGWAESSRGRSFKTLIFGAYDNGKLIWVGHGGGG
                     FKEKEMPGILQELKKIEIKRSPFANEVEYDTPAHWVKPVKVAIFEYATLTASGKIRKP
                     ATFKGWRYDKDANDVLLEKPMSEEQEKQVVELKEPAKPKKKATSSQRRKETNVKRPKE
                     ATGESNWPKLEKIQITSKDQVKIDGCTLVLTNIERELWDGVYKSDLITYYNNIAEYIL
                     PHIKNRPLSLHIKPYSPTAAGLYIKDMEGRQPECAEIFSTHRKHPKPGKRNIIDYLVC
                     NNRATLLYLINLGCIDINPWTSSVSDYLHPNFIVIDLDPSDEDFGKAITTAQAAKEFF
                     DKQKLKAYIKTSGKTGMHIFLPCTGFDFPQARAAAIVICEGIHELVPGITTTAVSIDQ
                     RGKKLYVDPNQNDEADTVASAYSCRPFKIPTVSTPLEWKEVKSNLDPHHFTIKTIFKR
                     LEKKRDLWKDIFDSKTAEANSRSLIKFTA"
     gene            complement(5778..6026)
                     /locus_tag="VEV83_14215"
     CDS             complement(5778..6026)
                     /locus_tag="VEV83_14215"
                     /inference="COORDINATES: protein motif:HMM:NF021471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HYK46328.1"
                     /translation="MPSSKNNGREVYHVLPNASGDRWVVSQENTEFKRLFDTKGEAEK
                     FAKERAQAAELGQVKIHGKDGNMEYEATYGEDPRQYPS"
     gene            6527..6961
                     /locus_tag="VEV83_14220"
     CDS             6527..6961
                     /locus_tag="VEV83_14220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46329.1"
                     /translation="MKKTLLILFVSCNLCVYGQFGDESLVHFSLQPRIGMNMEKYLIG
                     GLDNAFQFPHFEYALCMMMDKYEACYFSLRVGYVINIGTHIQVMPLVARAYKYESADK
                     TEYTRGDNYWVWNCGLRLKRNKFFIQTDYMEQLQFTIGAAIR"
     gene            complement(7029..8330)
                     /locus_tag="VEV83_14225"
     CDS             complement(7029..8330)
                     /locus_tag="VEV83_14225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46330.1"
                     /translation="MKKIVLLVVLVFSALYTIAQDEIIQLFVAQKKWEEAKTEVDKMV
                     ANSKLKDKDKATAYFWKLTVYSQLYIDPALSAKYPDAHDQAVDALNKYLALEPDMKQL
                     KLNATGVGNLYSGSFEKGKTYFQNKDWKNAYKYFSEAEVMGDMLLKNKLSASTATLDT
                     VTVLYAGYSAQNAQLPDSAVKYYTRLADIKVNDKDYEDVYKYLIQYYSDKKDDANFKK
                     YLALAKEVYPNDNSLWTQFEMQNVTANANLSQLLDKYHQEVAAGGMNEDKYTGYAEAF
                     ATNDSAQLAGMDSMQKVKLRLTAAEAFGKAFGLNDTMGLYAFNTGVIYYGFFQQLDDR
                     YSNYRGESAALKAKRAEIAKEEMKYADTAAQWLEKAYTTLKSKQNRSRAETTSLNRTV
                     DYLANIYYWERDQTKTIGNPKDYDKYDNLYKKYDAEHNTYK"
     gene            complement(8341..10890)
                     /gene="gyrA"
                     /locus_tag="VEV83_14230"
     CDS             complement(8341..10890)
                     /gene="gyrA"
                     /locus_tag="VEV83_14230"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HYK46331.1"
                     /translation="MEENQFPQETSDNDRIIQVNIEEQMKTAYIDYSMSVIVGRALPD
                     VRDGFKPVHRRILYAMNELGLSFNRPYKKCARIVGEVLGKYHPHGDTAVYDALVRMGQ
                     EWNMNHVLVDRQGNFGSPDGDPPAAMRYTEARLARLAESMLDDIEKETVDFQLNFDDS
                     LEEPVVLPSRVPQLLVNGSSGIAVGMATNMMPHNLSEVIDGCIALIDNKSITAEELMK
                     FVKAPDFPTGGVIYGMEGVKQALLTGRGRVVLRGKCHIDTKPSGREQIVITDVPYQVN
                     RDGLTDRIGQLVNDKTIEGVAHVNNESNNKEGTRIVVDLKRDAVANVIVNQLFKFTEL
                     QTSYGINNVALSRGRPKILNLKDLISEFVDFRMEVVIRRAKFELRKAKERDHILSGYL
                     IALDHLDEAIRLIRNSPTPETAKDNLINAGWGLDEVQAKAILELRLQRLTGMERDKIK
                     EEHEELLKQIAHLEELLGNEQLRYDLIKKELIEVKDRFGEPRKTEIQYLADEMRIEDL
                     IEKEDVIITISHLGYIKRTSASEYRQQRRGGRGAMGSKTRDEDFVEHLFVASTHDTML
                     FFTQQGRCYWLKVYEIPGGDKQSKGRAVQNMVQLMPGDKIKAIINVKNLDDKDFVSGH
                     NIVLCTKKGVIKKTALSDFSRPRTTGVNAITILEGDELLDAMLTNGNCEIMIAVKSGR
                     AIRFSEAKVRPTGRGAIGVGGIEVDGANDEVIGMICVEKEESKRTVLVVSEKGFGKRT
                     KIDEYRITNRGGKGVKTINITEKTGHLVGVLDVQEKEDLLITCKSGIILRTSVSNIKE
                     SGRATQGVILIRLEEGDEIAAISKVDEESAGIEDPENGNNTHEDSSLQNQQ"
     gene            complement(11072..>12625)
                     /locus_tag="VEV83_14235"
     CDS             complement(11072..>12625)
                     /locus_tag="VEV83_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HYK46332.1"
                     /translation="QAFAGMLWNKQFYYYDIPQWLDGDPAQPPPPQERTDGRNHNWLH
                     LNNNDIISMPDKWEYPWYAAWDLAFHCIPFSVIDAAFAKKQLLILTHEWYMHPNGQLP
                     AYEWSFSDVNPPVHAWATWRVYKIDQKNNNGKGDLDFLQTVFHKLLLNFTWWVNRKDA
                     EDNNVFEGGFLGLDNIGVFDRSKLFADGSFIEQADATSWVAMYSLNLMRIALELAMQN
                     PVYQDLATKFFEHFLYIAAAMASMGDDANGLWDEEDEFFYDVLKMGDGGSQKLKLRSI
                     VGLIPLFAVEVIDHHCLEKLPLFAQRLNWFLDNRPHLAELVSRWYEEGVAQKHLLSLL
                     RGHRMKRILKRMLDENEFLSDHGIRALSKYYKDHPYRIKIDDEDATVEYAPADSTTDM
                     FAGNSNWRGPVWMPVNFLIIESLQRFHHYYGNDFKVECPTNSGNYLTLNEIADFIKAR
                     ISKIFLSDEHGRRTVFGENEKFQTDPNFKDYVLFYEYFHGDNGRGVGASHQTGWTGLI
                     AKLLQPKRS"
BASE COUNT         3188 a         3003 c         2641 g         3793 t
ORIGIN      
        1 gatgaacatg ttgtttcttt gagatccgag aatccacgaa aaaaggatta gcatgtaacc
       61 gcttgtattt ccaaatcaag cggtttttct ttttacatcg cctacctttc tatccgggta
      121 attggaacga cgttcgcgaa ctagcgggtc aagtccgctg cccccgtgaa aaactttctt
      181 tgctatctgc accacccctc ttgcaggtac cgggaaaaga acttatcttt cgtaagcacc
      241 ccaaaaatca tttcgcacta attcaccatg aacacatcga tcaaaactgc gcttgccgcc
      301 attggcctgc ttgtcgcttt ttcctgtaaa aaagagaata gcgatcgtca acttcgaatg
      361 gacgattatg atgcaacgga tattgttgcg ggcaaataca ttgccgtaag aatgggcaaa
      421 caggtcgttg aaacagttgt ggcctcacat cggatgctaa ccaggcgtcc tttaacggaa
      481 aggattagtg atttaactgc tatgattgta acttcttcat aaaaccttcg tgaatgtaat
      541 agatgaaacg tgtactgaaa acagaatcta actttttttc acaattaaac gacttcccat
      601 gaacacaaca attaaaacgg gacttgctat ttttctgtta gcaatttcct gtaagaaaga
      661 aggcgcagac cttccatcaa acacctccga cgatgtgtcg aatatggccg cgggtaagta
      721 ccctatagtg aagattggca ctcaaaaatg gatgggcacg aatctaaatg ttgccaaata
      781 caggaacgga gacaagatac cgcaggtagc tgaccccact aagtgggctg gattacacaa
      841 gggagcatgg tgctggtata ataacgattc ggccaccggt gctgtgtatg ggagacttta
      901 taattggtat gctgtgcatg attcaagagg attagcgccg ttaggttggc atataccaag
      961 tgacacagaa tggacaactc tatcaacata tttggggaac aatccgggtg gcaaactgaa
     1021 ggataccgga accattgaag ccggcaccgg tttatggtat tatcctaaca cgggtgccac
     1081 gaatagcagt ggcttcaaag cgcttcccgg cggccaccgt ctgcccactg gctcatactt
     1141 ccacattggg acctacggca actggtggag ttctacacag gttgatactg cgaacgcctg
     1201 gaaccgcact ctgtccaacc agaatggcag cgtgggcagc agctaccacg ctctgcaaag
     1261 tggcttttcg gttcgttgca tcaaggatag catttagcgc tcgtaattgg gcgaagttca
     1321 gcctcggtta aagtatcacg cacaaggctc ggcaagaaaa agccgcggca ctttatttcg
     1381 tggcaacttc cacactgtta ttattattat tgtaagacga ttcgtgatga aaaaattaat
     1441 cttgagcaac ttttgctgat tcgagattgg tggaaagaat ttgtatgaaa ataacattct
     1501 ctctttcttt aattttagga ataagggcat agaagaaaaa caagaagata attacaaata
     1561 tttcaatgag gcacaaacaa taaaatacca acaagatttg aaaaactata attctaaaat
     1621 aaatcatgga tgaaagtaca gacctatccc ggtcataaat agaatgggac actttagtag
     1681 gatatttagg gtcaaccaac gccggcggta agttgaagga aactggaacc attgaagctg
     1741 gcacaggttt atggtatgct cccaacattg gcgccacaaa tagcaccggt ttcagtggcg
     1801 tgccgggcgg gtaccgcgat ggggctttct atggcttggg ctcttattgc tacatctgga
     1861 cctctactga atatgaagca tcagctgcgc ggtaccggct gctatattat gacgcgcgca
     1921 atgttcttaa gggcactacc gcggagttca ttggtttcta tgttcgttgc gttaaggact
     1981 aatttcacgt gccttgaaaa acatggccac ttctgccctg ctcttactgc ttataaacac
     2041 atcgacgttt aatatatttt ttaaattata ttgcttcgca aataacctat tctgaatgaa
     2101 cactacaatc aaaacagcgc ttgcggcatt cttgtttttt gccctttcct gtaagaaaga
     2161 gaatattaaa tcaacagtaa cggataacga tatttccgaa atggtttccg gtaagtcggt
     2221 tgtgcttatt ggtacgcaaa catggatggc gaaaaatctt agcgtgagtc ggtacaggaa
     2281 cggcgacaaa ataccgcagg taaaagattc cgctacgtgg gctacattaa ctaccggtgc
     2341 atggtgctgg tataataacg attcttccac tggtgctgtc tatggcaagt tatacaattg
     2401 gtatgctgta aacgatccac gcggattggc gcccacagga tggcacgtag cgaccgattc
     2461 agaatggtat gtacttgcaa attttttagg accaggcgca ggtggtaaaa taaaagaaac
     2521 cggaacaacc cattggttcg atcccaacgt tgatgctctt aacagcagcg gcttcaccgg
     2581 gctgccgggc ggttatcgca gtgaaattgg acaattctgc tacataagat atctcggttt
     2641 attttggacc gctacggggt acagcagttc ggttgcgtgg tatcgtcgtt tgctctgcta
     2701 tagtaatttc ctcgactact ggcggttccc gaagcaaatg ggtttttcgg ttcgttgtat
     2761 caaggactaa ttattcgtgt gcctcgcttc tcaatttttt ttcctgaaaa cattcaacat
     2821 gaaaataaca ttcacaagtt gtgtcgtttt aatgctgttg tcaatttcct ggacaaaaca
     2881 aaacggcagc attcgatctt ccgctattgg cgatgaaaat tcaactcagc caaataacat
     2941 cgcttcaatc accatcggct cacaggtatg gatggaaaag aatttggatg taagccggta
     3001 tagaaacgga gacaagatac cgcaagtaaa agattccgct acgtgggcta cattaactac
     3061 cggtgcatgg tgctggtata ataatgattc ttcaaccggt gttgtctatg gtaagttgta
     3121 caattggtat gctgtacatg atccaagggg attagcgccc attggatggc atgtaccaag
     3181 cgattccgaa tggtttgtcg tttacaattt tttaggtacc aatgcgcaca atgccggcgg
     3241 taaaatgaag gaaaccggaa cgacacattg gttggatccc aacgtgaacg cgatcaacag
     3301 tagcggcttc actgcacctg gaggcggcta tcgcgacaac cttggacaat tcgcctacct
     3361 taactttctt ggctactggt ggacttctac ttccaacggg atccgttatg cgttctgccg
     3421 ccgccttgtc tcgtacggtg gcttcatgga caggatgtct tacgaaaacg gaaagggttt
     3481 ttctgttcgc tgtgttaagg attaacgtgg tgcgtacttc ttgacaggtt ttaattgagc
     3541 ctttcttttg gttgcttgct aagaagtgtc aagcagtaaa cttaattaag ctccggctgt
     3601 tggcttctgc cgtcttcgaa tcaaagatgt ctttccacag atcgcgtttc ttttccagtc
     3661 gtttgaaaat tgtcttgatc gtgaaatggt gcggatcgag gttgctcttc acttctttcc
     3721 attcaagtgg tgttgaaaca gtcggaattt tgaagggcct gcaagaatat gcagaagcaa
     3781 cggtgtccgc ttcatcattt tggttcgggt ctacataaag ttttttgcct cgctgatcga
     3841 tcgagaccgc tgtagtcgtt atacctggca ccaattcatg aattccttca catatgacga
     3901 tcgctgctgc gcgtgcttgc ggaaaatcaa aaccggtaca cggaagaaat atgtgcatgc
     3961 cggtcttacc acttgtcttt atatacgctt tcagcttttg cttatcaaaa aactcttttg
     4021 ccgcttgtgc tgttgttatc gctttgccga aatcttcatc cgacgggtca agatcaataa
     4081 cgataaagtt tggatgcagg taatcactca cgctggacgt ccagggattg atgtcaatac
     4141 aaccaaggtt tattaagtat agtaatgtcg ccctgttatt acatacaagg taatcgataa
     4201 tattgcgctt gccgggtttt ggatgtttcc tatgcgttga aaatatttct gcgcattcag
     4261 gttgacgacc ttccatatcc ttaatataca gacccgcagc agtgggcgaa tatggtttaa
     4321 tgtgcagtga taatggcctg ttctttatat gaggcaggat gtactctgcg atgttgttgt
     4381 agtaagtgat caaatcagat ttataaacgc catcccacag ctcacgttca atgttagtaa
     4441 gcacaagcgt gcagccgtcg atcttcacct ggtctttcga cgttatctga attttctcga
     4501 gcttaggcca attgctttca ccagtcgcct cttttggcct ctttacattt gtctctttgc
     4561 ggcgctgtga agacgttgct ttcttttttg gcttagcggg ttccttgagc tcaaccactt
     4621 gcttttcctg ttcttcactc atgggctttt cgagcaacac gtcattcgca tctttatcgt
     4681 aacgccaacc tttaaacgta gccggtttcc ttatcttacc cgatgctgtt aaggttgcat
     4741 attcgaatat ggcaaccttc actggcttca cccaatgggc gggcgtgtca tattcaactt
     4801 cgttcgcgaa aggcgatctc ttgatttcaa ttttttttag ttcctgcaga atgccaggca
     4861 tttccttttc cttaaaaccg ccacctccat gcccaaccca tatgagcttg ccattatcat
     4921 aagcgccaaa aatcagcgtt ttgaaagagc ggccgcgtga agactcagcc caccctccta
     4981 ttacaaattc ctgccggcgc ttcgtagtga tcttaagcca gtctccacct ctcttatccg
     5041 gcacatacac gctgtcttcc cgtttcgcga tgattccctc aagctccatt tttttggcct
     5101 gctcaaacaa tgcaatacca tctgtgaaac ttgcgctata ctttataatt ccagttttcg
     5161 gcaaagcttt ctcaagaata gtctttcgtt ctgaaagcgg acgattcatc aagctgctac
     5221 catctttcca aagaatatca aacacataat atgctaatgg agcatcggga tttgcttttt
     5281 gtaccaggtc aaaatttact ttcccctgct cgtcaaatgc aactacttcg ccatcgatga
     5341 caaagtctcc ggtgatcttt tttattgcat tgctaactac tgcgtatcgc gcggtataat
     5401 ccaggccttt tctcgagcgc agagttacat tcttgccatt cttgtaagca ataattctat
     5461 agccatccca cttaacctcg tatatccaac cgggcgcggt aaatggtttt gcaaccaggg
     5521 tgcatagcat cggtttgata atggctggaa tgcgcgtttt ttctgctgag ggtactgatt
     5581 tttttttaac ggtcatggaa gcgatacagg cactatttct aatgcctgcg taaacttttg
     5641 tattaaactc tgcttagcta tcgacctagc ggctctcatt tgctttaaat gaatttgcag
     5701 tcaagctgca cattttatgt agtgcgtcag gcaccgttgc cacagcgcat tgaaaccgcc
     5761 ttccctggaa aaacaagtta acttggatac tgacgcggat cttcgccgta cgtagcttcg
     5821 tattccatgt tcccgtcttt cccatggatc tttacctgtc caagctctgc agcttgtgcg
     5881 cgctctttgg caaatttttc agcttcgccc tttgtatcga ataagcgctt gaattcagtg
     5941 ttttcttgtg acaccaccca acgatcacct gatgcattcg gcagtacatg ataaacctcc
     6001 cttccgttgt ttttacttga tggcatgatt acctccgttt actaagaatg tttccaacaa
     6061 gcatgccatg cggccgtgtt cactgttaat gtctcaatcc attggtttac cccttcgtcg
     6121 aaaaactttt aattccgctc ggcgaaatca gcataaaacg aatggggaag cgagcgacaa
     6181 aaaaatgccc gtataagact atacaggcgt tgctaaccta tgaaaaacga tataaaataa
     6241 ttattgcaat aacaagacca caattgttct tgtatcgcgg taacacttta ctgttgatat
     6301 tttttccagc caattgctgt cggccgtttg tttgtgaaca agaaccgccg gtttggaata
     6361 aaatagattt tgccttgccg cgaaaagcgg ctatcttaca cagcgtatca atctacctgc
     6421 gaaataccat cacctgataa cctcaaaaaa aaatacagaa ctgaaaatta gaatcgcgtt
     6481 tgtaaagacc aataggaatg aaaattgtgt ccacaacgta atctgaatga aaaaaactct
     6541 acttatttta tttgtttcct gcaacctgtg tgtttacggc cagttcggcg atgagtccct
     6601 tgttcatttc agcctgcagc cacgaatagg aatgaacatg gaaaaatacc tcataggtgg
     6661 tttggataat gctttccagt ttccgcactt cgagtacgca ctttgcatga tgatggataa
     6721 atatgaggcg tgttatttta gtcttcgcgt tgggtatgta attaacatcg gcactcacat
     6781 ccaggtaatg ccgctcgtgg cccgcgctta taaatacgaa tcggcagaca aaacggaata
     6841 cactcgcggc gacaactatt gggtatggaa ctgcggcctt aggctaaagc gaaataagtt
     6901 tttcattcag accgactata tggaacaatt gcagttcacg atcggcgctg caattcgatg
     6961 acgatccttt caaaacaaaa agccgctcaa ataagaacgg ctcttcaaaa attggctttt
     7021 caattcagct atttatacgt gttgtgctca gcatcatact ttttataaag gttgtcatac
     7081 ttatcgtaat ccttcgggtt gccaatagtt tttgtttggt ctctttccca gtaataaatg
     7141 ttagccaggt aatctaccgt gcggttaagg ctcgtggttt ccgctcttga tctgttctgt
     7201 ttacttttca gagtcgtgta tgccttctcg agccattgcg ctgcagtatc tgcatacttc
     7261 atttcctcct ttgcaatttc ggcacgctta gcctttaagg cagcactttc gccgcggtaa
     7321 ttggaatagc gatcatcaag ctgctggaag aaaccataat agatgacgcc ggtattgaaa
     7381 gcatacaaac ccatagtatc gtttaatcca aaggccttac caaacgcttc ggcagcggtt
     7441 aagcgcaact tcactttctg catgctgtcc atacccgcga gctgtgcgct gtcatttgtt
     7501 gcaaatgctt ccgcatagcc cgtgtattta tcttcgttca ttcctcctgc ggcaacctcc
     7561 tggtgatatt tgtcgagcag ttgtgacaag tttgcgttgg ctgttacatt ctgcatttcg
     7621 aactgcgtcc acaaagaatt atcattcggg tacacctctt ttgcaagagc aagatatttt
     7681 ttgaaattgg cgtcatcttt tttgtcggag tagtattgaa tgaggtattt gtatacgtcc
     7741 tcatagtctt tgtcattcac cttaatgtcg gctagccgcg tataatattt tacagcgcta
     7801 tcaggaagct gtgcattctg agcagaataa ccggcgtaca gaactgtcac agtgtctaaa
     7861 gtagccgttg acgcgctcaa tttgttttta agcagcatat cgcccatcac ttccgcttca
     7921 gagaaatatt tataagcatt tttccagtct ttgttttgaa aataagtttt ccctttttca
     7981 aaagagccgc tgtaaaggtt tcccacaccg gtcgcattta gctttaactg tttcatgtcc
     8041 ggctccaacg ccaaatattt gttcaatgcg tccactgctt gatcgtgtgc atccgggtat
     8101 ttcgcgctta acgccgggtc gatatacaac tggctataga cggtcaattt ccaaaaataa
     8161 gccgttgctt tatccttatc ttttaacttg gaatttgcca ccatcttatc tacttcggtt
     8221 ttcgcttcct cccatttttt ttgtgcgacg aatagctgga ttatttcatc ctgggcgatc
     8281 gtatacaaag cggaaaagac aagcacaacc aatagaacta tttttttcat gtgattaaat
     8341 ttattgttga ttttgcaaag atgagtcttc atgggtattg ttgccgtttt caggatcttc
     8401 tatgcctgcg ctctcttcat ccacttttga aattgccgct atttcgtcgc cttcctcaag
     8461 acgaatcaaa ataactccct gtgtcgccct tccggattct tttatattag aaacagaggt
     8521 ccgcaaaatg atccccgatt tgcaggtgat aagcagatct tctttttcct ggacgtcgag
     8581 aacacccaca aggtgcccgg tcttttctgt aatgttgatt gttttaacac cttttccgcc
     8641 acggtttgtg atacggtatt catcaatttt cgtgcgcttc ccaaacccct tttcactcac
     8701 taccaaaaca gttcttttgc tttcctcctt ctcgacacat atcatgccaa ttacctcatc
     8761 atttgcgccg tcaacttcaa tgcctccgac cccgatggcg ccgcgtccgg tgggtctcac
     8821 tttcgcctca gaaaaacgta ttgctctgcc gcttttcacc gctatcatga tctcacagtt
     8881 gccgtttgta agcatcgcat ccagcagctc atctccttcc aaaatcgtta ttgcattaac
     8941 gcctgttgtg cgcgggcgac tgaaatcaga caatgcagtt tttttgatca cgcccttttt
     9001 tgtgcagagt acaatattgt gcccgctaac aaagtccttg tcatcaagat tctttacatt
     9061 gatgatcgcc tttattttat caccgggcat cagttgaacc atgttctgca cggccctgcc
     9121 tttgctttgt ttatcgcctc ccggtatctc gtaaactttc agccagtaac atctcccctg
     9181 ctgcgtaaaa aacagcatcg tgtcgtgcgt tgatgcgaca aaaagatgct caacaaaatc
     9241 ttcgtcgcgt gtcttgcttc ccatcgctcc tctgccgcct cttctttgtt gccggtattc
     9301 cgatgcgctg gtccttttga tataacccaa atgagaaatg gtgatgatca catcttcttt
     9361 ttcgatgaga tcttcaatgc gcatctcgtc agccaggtat tgaatttcag ttttcctggg
     9421 ttctccaaac cgatctttta cctcgatcaa ttcttttttt atcaggtcgt acctgagttg
     9481 ttcattcccg agtagttctt caaggtgcgc gatctgcttc agcaactctt catgctcttc
     9541 ttttatttta tctctttcca tcccggtgag gcgttgcaat cttaattcaa gaattgcttt
     9601 tgcctgcact tcatcgaggc cccaccctgc atttattaag ttgtcttttg cggtctccgg
     9661 cgttggagag ttcctgatca aacggatggc ttcatccagg tggtcaagcg cgatcaaata
     9721 gccactcaga atatggtctc tttcttttgc tttcctgagt tcaaattttg cacgacggat
     9781 cacaacctcc atcctgaagt cgacaaactc acttatcaaa tcctttaagt tcaggatctt
     9841 cgggcgtcct ctgctgagtg caacgttgtt gatgccataa ctcgtctgca gttcggtgaa
     9901 tttgaaaagc tggttgacga taacgttggc aacggcatca cgtttgagat caacgacgat
     9961 gcgggtacct tctttattat tgctttcgtt gtttacgtga gcaacgccct cgatggtctt
    10021 gtcattcacc agctgaccaa ttctgtctgt gagtccatcg cggtttacct ggtaaggaac
    10081 gtctgtgatg acgatctgct ctctcccgct cggcttcgta tcgatatggc atttgccgcg
    10141 cagcaccacc cttcctctcc cggtgagcaa agcttgcttg accccttcca ttccatagat
    10201 cacgccgcct gttggaaaat caggagcctt cacaaacttc attagttctt ctgcggtgat
    10261 cgacttatta tcgatgagtg caatgcagcc atcaataact tcggaaagat tgtgcggcat
    10321 catattcgtc gccatcccta cagcgatgcc gcttgagccg ttaaccaaca actgcggcac
    10381 cctcgacgga agcacaaccg gctcttccaa cgaatcatca aagttgagct ggaaatctac
    10441 cgtctctttt tcaatgtcgt cgagcattga ctcggcaaga cgcgcaagac gggcttcggt
    10501 ataccgcatg gccgccggtg gatcaccatc agggcttcca aagttcccct gccggtcgac
    10561 cagtacatgg ttcatgttcc attcctgccc cattcgcacc aaggcatcat acacggccgt
    10621 gtctccatgg ggatgatatt ttcccaacac ctcacctact atgcgcgcac attttttata
    10681 tggacgatta aaacttaaac cgagttcatt catcgcatac aatatccttc tgtgaaccgg
    10741 tttgaaccca tcgcgcacat cgggcagggc acggccgact attaccgaca ttgaataatc
    10801 aatgtaggcc gttttcattt gctcctcgat gtttacctga attatgcgat cgttatctga
    10861 agtttcctgg gggaattgat tttcttccat tcgtaatttc caactataaa ctgaattaat
    10921 ttttgagtcc gcaaatttag tcttttcacc tcgttaaacc gccttgttcc gtcttttttt
    10981 atcacgattt ttgttaagaa aagtgagtaa tgttttgaga aggaatgttt atgttatcga
    11041 tgcgtgccgt cactgttgtt ttcaaactcg atcaactcct ctttggctgc aatagttttg
    11101 cgatcagccc ggtccagcct gtttgatgag aagcacctac tcctctccca ttatcaccat
    11161 gaaaatattc atagaacaac acataatctt tgaagttcgg atctgtttga aacttttcat
    11221 tttcaccaaa caccgtccgc cttccgtgct catctgataa aaatatcttt gaaattctcg
    11281 ccttaatgaa gtcggcaatt tcgttcaacg tgaggtaatt gccgctgttg gtcggacatt
    11341 ctactttgaa atcatttccg taataatgat gaaatcgttg caggctttct attatcaaaa
    11401 aatttacggg catccatacc gggccgcgcc agttgctgtt gccggcaaac atatctgttg
    11461 ttgaatcagc gggggcatat tccacggttg catcttcgtc gtctattttt atgcggtacg
    11521 gatgatcttt ataatatttc gacagcgcgc ggataccatg atcactcaag aattcattct
    11581 cgtcaagcat gcgtttcaat attcttttca tgcgatgacc gcgtaacaaa cttagtaaat
    11641 gcttctgcgc tacaccttct tcgtaccacc tcgaaacaag ctcggcgagg tgtgggcggt
    11701 tgtcaagaaa ccaatttaat cgctgtgcga aaagcggcaa tttttcgagg caatggtgat
    11761 ctatcacttc aaccgcgaac aaggggatca agccgacgat gcttcgcagt tttaattttt
    11821 gtgaaccgcc atcacccatc ttcagcacat cataaaaaaa ttcatcttcc tcatcccata
    11881 atccgtttgc atcatcaccc atacttgcca tggcagcagc gatgtaaaga aaatgttcaa
    11941 aaaactttgt tgccaggtcc tggtaaaccg ggttctgcat cgcaagttcg agcgcaatgc
    12001 gcatcaggtt taacgaatac atcgcgaccc agctcgttgc gtcagcctgt tcgataaaac
    12061 ttccgtcagc aaacaactta cttctgtcga acacaccgat attatccagg cccaaaaaac
    12121 cgccctcaaa aacattatta tcttctgcat cctttctgtt cacccaccac gtgaagttca
    12181 agagcagttt atgaaaaacc gtttggagga aatcaagatc tccttttccg ttattatttt
    12241 tctgatcgat cttatacacg cgccacgttg cccatgcatg tactggtgga ttaacatcac
    12301 tgaacgacca ctcgtatgcg ggcaactgcc cattcgggtg catataccac tcgtgggtaa
    12361 ggatgagtaa ttgctttttt gcaaacgccg catcgatcac cgaaaatgga atgcaatgga
    12421 acgcgaggtc ccatgccgcg taccatgggt actcccattt atcgggcata gagatgatgt
    12481 cgttattgtt cagatggagc caattgtgat tgcgtccatc cgttctttcc tgcggaggcg
    12541 gcggctgcgc cggatctccg tcgagccact gaggaatatc gtaatagtaa aactgtttgt
    12601 tccataacat ccctgcaaaa gcctg
//
LOCUS       DASQJI010000521         5012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1906789,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000521 DASQJI010000000
VERSION     DASQJI010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906789"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            275..1189
                     /locus_tag="VEV83_14240"
     CDS             275..1189
                     /locus_tag="VEV83_14240"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK46333.1"
                     /translation="MTFNARGVILFIFLVCMLGATAQTSPVQNIFPAGTIKYNNIPYA
                     GDTLQKHLLDMYVPQNAGANTPLVVWVHGGAWMLNDKYADMSYMKNTVKGFIENGYAL
                     ASIDYRYSTTASFPAQIQDCNQAVEFLYEHASEYKLDKDRIALIGFSAGGHLASLMAL
                     SNNNDVNEFYPNGNKPHFKIKCVLDFYGPSDLVMLANNPDTSVNNMRNPVSILLGAMA
                     VDRPDIAKRASPVTYVDKGDPPFLIVQGEKDESVPNTQSKILSSWLTIAGVKNQLIIV
                     PNAPHYGEMFDAEYIRKALFSFLTENLR"
     gene            complement(1226..1921)
                     /locus_tag="VEV83_14245"
     CDS             complement(1226..1921)
                     /locus_tag="VEV83_14245"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK46334.1"
                     /translation="MEQSSVRVFSNNWNIYEKIRHANYMHHAEFATQTADALKSFNGK
                     HLHILDIGCGDAKALLPVLEQVTVASYTGYDLSPNTLQLAEGHLTGRNFGYSLQQGDM
                     MQLLQSDEKKYDLIYSAFAIHHLHDKEKRKLLQLCFAHLTPGGKMVYMDIFRAQQMSR
                     EQYIERYLSMIRNDWQVLSENEKQLLCEHISEYDFPADTEISIEWMQFLGFTLEQRYQ
                     PDAYHAMLVLSGE"
     gene            complement(2519..2977)
                     /gene="tnpA"
                     /locus_tag="VEV83_14250"
     CDS             complement(2519..2977)
                     /gene="tnpA"
                     /locus_tag="VEV83_14250"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYK46335.1"
                     /translation="MHTYSQINIHSIFAVKYRENVITTHFRDNLHKYMSGILRNDGSY
                     PLAVGGWEDHVHVFFEMQPTMSVSKQMQMLKASSSKWINDNKFVKGRFLWQEGYAAVS
                     VARSDRDRVIKYIMNQEEHHGSKRFREEYFELLNEFQIEFDPQYIFEFYE"
     gene            complement(4065..4961)
                     /locus_tag="VEV83_14255"
     CDS             complement(4065..4961)
                     /locus_tag="VEV83_14255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46336.1"
                     /translation="MKCQMYRLIPASFLLCLSFASCMKKDSVPSSSQTTTQSLLMRAT
                     NDIFNAGNQQSQELADVIGSNGMVSGDSSDCRVVSYAPSRDIYPYVKTVDFGSGCASA
                     DGVTRRGKKIISVYADWRTAPAGTLISEATFSDFYIDSIRVEGNVKTYVDTAAVPGPV
                     AFKVVSTKTLTSPNGDVTTFTATNYWLQTQGSDTPTGTDDVFQITGSATGNEVLDGVT
                     SVIWSYNTDPAHPIIKDGDCEFRTQGALQIHVQIQTGGMSNFTEYLDYGNGACDNVAT
                     LSINGGEPQEVSLPLIFWPLSL"
BASE COUNT         1393 a         1074 c         1116 g         1429 t
ORIGIN      
        1 ccggtgaagg atttgagggc ggcttgcgcc ggatttgaag cgtaaagcgg gcactgcaga
       61 tgaagagtgc gtgttcgctg gtgcttcaaa aattatccat tcacatgtca tagtatccgt
      121 ccgttacttt cgattaagag aaacgagatg aaaaatgagc gaaaaccctc ttccgccacg
      181 ttatgcttga taaatttgca caagagtgat atgtgggaaa ctgcaaaaga aagatcgaat
      241 tgattttagc ttacattcaa ctaaagtttt cgtcatgaca tttaatgcac gcggtgttat
      301 cttgttcatc tttctggttt gcatgctggg cgcaactgca caaacttctc ctgttcaaaa
      361 tatctttcct gccggaacga tcaaatacaa taatattcct tacgcgggtg acactttaca
      421 aaaacacctg ctcgacatgt atgttcctca aaatgccggc gccaatacac cacttgttgt
      481 atgggttcat ggcggcgcat ggatgcttaa tgataaatat gcagacatga gttacatgaa
      541 aaatacggtg aaaggattta ttgaaaacgg ttatgcgctt gcatcaattg attaccggta
      601 cagcacgacg gcttcttttc cggcgcaaat acaagactgc aaccaggcag tggaatttct
      661 ttacgagcac gcgtcagaat ataagctgga caaagaccgc attgcactga tcggcttttc
      721 tgcaggcgga catcttgcgt cgttgatggc actgtcaaat aacaatgacg taaacgaatt
      781 ttatcccaat ggaaataaac ctcatttcaa aataaaatgc gtgcttgatt tttacggtcc
      841 gtccgattta gtaatgcttg cgaacaatcc cgacacttca gtcaataata tgcgcaaccc
      901 cgtctctatt ttgctgggag caatggcagt agatcgacca gatattgcta aacgcgcaag
      961 cccggtgacg tatgttgata agggagatcc gccattctta attgtgcaag gcgaaaaaga
     1021 tgaatccgta ccgaacacgc aatcgaaaat tctgagttca tggttaacga tcgcaggcgt
     1081 gaaaaatcag cttattatag tcccgaatgc gccgcactat ggagagatgt tcgatgcgga
     1141 gtacataagg aaagccctgt ttagttttct tacagaaaac ctgaggtaaa cggatgttgt
     1201 tactccctgt gtgctccatt gccacttact ctccactcaa aacgagcatc gcgtgataag
     1261 catcaggctg ataccgctgt tcaagtgtga aacctaagaa ctgcatccat tcaatgctga
     1321 tctctgtatc ggcagggaaa tcgtattcgc ttatgtgctc gcaaagaagc tgcttttcgt
     1381 tttcggaaag tacctgccag tcgttcctga tcatcgaaag atatctttcg atatactgtt
     1441 cccggctcat ttgctgcgcg cggaaaatat ccatatagac catttttccg ccgggcgtta
     1501 aatgcgcaaa acaaagctgg agcagttttc ttttttcttt atcgtgcagg tgatgaattg
     1561 cgaaagcgct gtatatgagg tcatattttt tttcgtcgga ttgcaacaac tgcatcatgt
     1621 cgccctgttg aagtgagtac ccgaaatttc gcccggttaa atggccttcc gccaactgca
     1681 gcgtattcgg tgacagatcg tatccggtgt aagatgcaac tgtcacttgt tcgagtaccg
     1741 gcaataacgc ttttgcatca ccacagccga tatcaagtat gtgcaggtgt ttgccattaa
     1801 agctttttaa cgcatccgcg gtttgcgtgg cgaactctgc atgatgcata tagttcgcgt
     1861 gcctgatctt ttcgtagata ttccagttat ttgaaaatac ccgtaccgag ctttgttcca
     1921 tcgtttcagt ggattaaaaa tgtataaaac aaacttcgca gttaagctaa agattttttt
     1981 aatgcaaata ttttctcaca tcagctgcct tccaggccaa tcgacaaaaa tgctttggat
     2041 attgatttta gattgtgtgg aatacaggtt cgtttcaacg gtttctggtt ggcaattacc
     2101 gccgacaatt attacggtct tcaacgatta tcgtcgcccc ctgcgagtta aatttaatac
     2161 cgggttcttt tctaccaaaa gatcgtccct gtgggggtta gaattcagta atgttttcgt
     2221 ttttaagcaa aaaatttcga gtccctaagg ccgaccatat ggtagaaaaa tgaattggag
     2281 gatgtgcatt aattccgagc tgcagacctt gtagttgctt tctatcaaaa tgaaaaattc
     2341 aatttccgag tgagaatacg cggagcaaaa ctgttttcag tcccggaggg acgatcatat
     2401 ggtagaaaaa tgaataagaa gatgtgaatt aagtcccagc gggacgacct aatgagagct
     2461 aatggtgcat ttcaaacgta aaaatcttta cgaagcctgc ctgtaatttt cgtcgctatc
     2521 attcataaaa ttcaaaaatg tattgtgggt caaattcaat ttgaaattca ttcagcaatt
     2581 caaaatattc ttcccgaaat cttttgctac catgatgctc ctcctggttc atgatgtatt
     2641 taatcacgcg atcgcggtcc gaacgtgcca cagaaacggc tgcataacct tcctgccaca
     2701 gaaacctgcc ttttacaaac ttgttatcat ttatccattt ggatgaactt gcctttaaca
     2761 tctgcatctg tttggaaacg gacattgttg gttgcatttc aaagaacaca tgcacatggt
     2821 cttcccagcc gccaactgcc agtggatatg atccgtcgtt gcgcaaaata cctgacatat
     2881 atttatgcag gttatcacga aaatgtgttg tgatcacatt ctctctgtat ttcaccgcaa
     2941 aaatgctatg aatgttgatt tgggaatagg tgtgcattag tggttggttt taatggttta
     3001 tggttgtgaa tgattacggc cgacaatgaa tatggtcgtc cctacgggac ttaaatttaa
     3061 aattacgttt tcttttctac caaaagatcg tccctgcggg acttaggatt cagctaatgt
     3121 tttcgttttt acctaaggat tttcgagttc cgaggagcgc ccatatggca ggtaaacgaa
     3181 taaaaacatc tgcataagtc ccagcgggac gacctggtag ttgcatcaat tttacgcatc
     3241 agaatgcata aagtttaagt ggccgaatgg acgcccttat ggtatgtaaa cgaatagaag
     3301 caggtggatg aatttcccag ccgcagacct tgtagttgct tgctgtcaac gaaaattaaa
     3361 tttccgaata agaatacgca gaggaaagtg ttttgagtct cggaggacga catattgtag
     3421 ctaaatgtaa aagaatgtgc attaattcag agcggcagaa cttgtagttg cttggtgtca
     3481 acgaaaatac aatttccgaa taagaatacg ggcaaaactg ttttcccgac gggccgacca
     3541 tatgttagaa aaatgagttg gaagatgtgc attaattccc agccgcagac cttgtagttg
     3601 ctttgctgtt aagaaaattc aatatccgaa taagaatacg cgcaaaaccg tttcagtccc
     3661 gaaggccata tggtaaaaaa tgagttggaa gatgtgcatt aattcccagc ggcagacctt
     3721 gtagttgatt tgcagtgaag cgaaaaattc aatttctgaa taagaatacg cggagcaaaa
     3781 ctgttttcag tcccaaaggg acgaccatac ggtagaaaaa tgaattggag gatgtgcatt
     3841 aagtcccagc gggacgacca tattagacgg catacgtaac gctcaatcat gacaatttga
     3901 gccaacctgc aacacaaact gcgggcgtca ccctcgcgtt agtgaatgga aacgtcacca
     3961 aaaaaggcac cccgataaaa aggtgcccgt ttttctaatg gagattgatt caggtttctt
     4021 gaatcgctgg cggctggtgt ttttcagaaa atacttttca caggttataa actcaacggc
     4081 cagaaaatta gcggaagaga aacttcttgc ggctcgcccc cgtttatgct taatgtagcc
     4141 acgttatcac atgccccatt cccataatcg agatattcgg tgaaatttga catgccgccg
     4201 gtttggatct gtacatgtat ttgcaatgct ccttgcgtgc ggaattcaca atcaccgtct
     4261 ttaattatcg ggtgcgccgg gtctgtgtta tacgaccaaa taacagatgt cacaccgtcc
     4321 agcacttcgt tgccggttgc gctgcctgta atttgaaaaa catcatctgt cccggttgga
     4381 gtgtcgctgc cttgtgtttg aagccaataa ttagttgccg tgaaagttgt tacatctccg
     4441 tttggtgacg taagcgtttt agtgcttaca actttgaagg cgaccggtcc cggtaccgcg
     4501 gctgtatcaa catacgtttt tacgtttcct tctacgcgta tgctgtcaat gtaaaaatcg
     4561 ctgaaggtgg cctcacttat cagcgtacct gcgggggccg ttctccagtc ggcgtatacg
     4621 ctgattattt tttttccacg ccgcgttaca ccatctgccg acgcacatcc gcttccaaaa
     4681 tccacagttt tgacgtacgg ataaatatca cgcgacggag catagctcac aactctgcaa
     4741 tcggaggaat cgccggatac catgccgttg ctcccaatta cgtccgcaag ttcctggctc
     4801 tgctggttcc cggcattgaa gatgtcgttg gtcgcccgca taagcagcga ttgcgttgtt
     4861 gtttgagatg aggaagggac ggagtccttt ttcatacatg aagcgaaact taaacacagc
     4921 aggaaacttg caggtatcaa cctgtacatt tggcatttca tggtttacag ttttgaagtg
     4981 tagataaaag cggagagcta ggccatactc at
//
LOCUS       DASQJI010000522         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1906930,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000522 DASQJI010000000
VERSION     DASQJI010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906930"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..2299
                     /locus_tag="VEV83_14260"
     CDS             269..2299
                     /locus_tag="VEV83_14260"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYK46337.1"
                     /translation="MNRLLSYALLFISLCFTSASFGQQDKNFKFIDQANMDPSVKPGD
                     NFYLYANGGWLKKNPVPASKTRWGSFDVLRQTSLDRSKILCEEAAANPSKSSLYQRVG
                     DLYAAGMDSGAIEKLGYTPIKSELTRLNSLSTSDEVLHEILTLRMHGIGGVLFGFSVE
                     QDDKNVNQYIPALRQGGTTLPDRDYYLKNDTRSQTIRTEYSKYVTDMFKLVGDDDATA
                     QRKAQNILALETALAKAQLSRVELRDPIKTYNKFSLGDLSKTTSGLDWAAMLATMKVP
                     TADSILCNNPTFFKTANSLLSAVPLDTWKAYLQWAIIKNTTAYLSSDFVNRQFQFNQV
                     LTGQKQITPRWQRMSAMVDNNLGELLGQLYVQKYFDESAKQRMLTLVKNVQQTLGERI
                     QRLDWMSDSTKQQAMIKLNAIVNKIAYPDKWETYPGVVINRNDLLGSLKSVDEWDYND
                     MVSHMGKPVDKTKWDMTPPTINAYYNPGNNEVVFPAGILQFPFFDANADDAIIYGGIA
                     AGIGHELTHGFDDQGRQYAADGNLKDWWTEEDAKKFTERANLVVTQYNGFVVNDTLHV
                     NGNLTLGENLADLGGINVAYEAFKKTDEGKSNKKIDGFTPDQRFFLSWAQIWRSNILP
                     DFQAQLVLTDPHSPGMYRCNGPVQNMDAWYAAFNVQPGDKMYKPESERIKVW"
BASE COUNT          692 a          486 c          557 g          601 t
ORIGIN      
        1 ggcgcaaagt cacccttgcc gctgataact accatgccaa tcgtaaatac aaggaagaac
       61 gtgccgataa actcggtaat atattttctc agtcccatag atgttgattt tggtgaaaca
      121 atcattaaaa ttaattgaac aggtcttcat ttgatgtgat tatcggccaa caccccggac
      181 ttaaccgtta aatcaattgt cttaaaattt tttgaatcgc tttagccgta cggtcgtatc
      241 gattactttt gcgcgaaaat ttttagaaat gaatcgattg ctttcttatg cgctgctctt
      301 tatttccttg tgttttacga gtgcttcttt tggtcaacag gataaaaatt tcaaattcat
      361 tgaccaggcg aatatggacc cgtcggtaaa acccggagac aatttttatc tctatgccaa
      421 tggcggatgg ctgaaaaaga atccggtgcc tgcatcaaaa acgagatggg gcagctttga
      481 cgtgttgcgc caaacaagcc tggaccgttc gaaaatcttg tgtgaagaag cggcggcgaa
      541 tccttcgaaa agctcattgt atcagcgggt aggcgatctc tatgccgcgg gaatggacag
      601 tggagctatc gaaaagttag gctacacgcc tattaaaagt gaattgacca ggctcaattc
      661 tttgtcaacc agcgatgagg ttttgcatga gatactcacg cttagaatgc atggcattgg
      721 cggcgtgttg tttggatttt ctgttgaaca agacgacaaa aacgtcaatc aatatatacc
      781 agctttgcgc cagggtggaa ctactttgcc tgaccgggat tattatttaa agaatgatac
      841 gcgcagccaa acgatccgca cagaatattc gaaatatgta acagatatgt tcaagctggt
      901 gggcgatgat gatgcaactg cgcagaggaa agcgcaaaat atcctggcac ttgaaacagc
      961 tttagccaaa gcgcaattga gccgtgttga attgagagac ccgatcaaaa cttataacaa
     1021 attttcgctt ggtgatctta gcaaaacaac ttccgggtta gactgggcgg ccatgcttgc
     1081 cacgatgaag gtcccaaccg cagacagcat cctttgcaac aatcccacat ttttcaaaac
     1141 agcaaattct ttgttgagcg ctgttccgct ggatacatgg aaagcttacc tgcaatgggc
     1201 gattataaaa aatactacgg cgtatttaag cagtgatttt gtaaacaggc agtttcagtt
     1261 caaccaggtc ttaaccggcc agaagcagat cactccacgc tggcagcgga tgagcgcaat
     1321 ggttgataat aatctcggcg aactacttgg ccagctctat gttcagaaat atttcgacga
     1381 atcggctaaa caaagaatgc ttacgttagt taaaaatgtt cagcaaacgt taggcgaacg
     1441 catccagcgt ctcgactgga tgagcgattc cacgaaacag caggcgatga tcaagcttaa
     1501 tgcaatcgta aacaagatcg cctatcctga taagtgggaa acatatccgg gcgttgtgat
     1561 caaccgcaat gatctgcttg gcagtttaaa aagcgttgac gagtgggatt ataacgatat
     1621 ggtgagccac atgggtaaac ccgtcgacaa aacaaagtgg gacatgacgc cgcccacgat
     1681 caatgcctat tataatcccg ggaacaatga ggttgttttt cccgcaggca ttttacaatt
     1741 tccatttttc gatgcgaatg cggatgatgc catcatttat ggaggcatcg ctgcgggcat
     1801 tggccacgag cttacacatg gcttcgatga ccagggccgg caatatgcgg ctgacggaaa
     1861 tttgaaggac tggtggactg aagaagatgc gaaaaaattt accgagcgtg cgaaccttgt
     1921 ggttacgcag tataatggtt ttgtcgtgaa tgacacattg catgtaaacg gtaaccttac
     1981 gttgggtgaa aaccttgctg accttggcgg tatcaacgtg gcttacgaag cattcaaaaa
     2041 aactgacgaa ggaaaaagca ataaaaagat cgacgggttt acgcccgacc aacgtttctt
     2101 tttaagctgg gcgcagattt ggagaagcaa catacttcca gatttccagg cgcagttagt
     2161 tctaaccgat ccgcattctc cgggcatgta ccgatgcaac ggtccggtgc aaaacatgga
     2221 tgcatggtat gcagccttta atgttcagcc gggcgataag atgtataaac cagaaagtga
     2281 aagaataaaa gtttggtgag attcaaataa ttaattttgg aaacgggtgg ctgaaa
//
LOCUS       DASQJI010000523         9332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1598965,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000523 DASQJI010000000
VERSION     DASQJI010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9332
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598965"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1178
                     /locus_tag="VEV83_14265"
     CDS             <1..1178
                     /locus_tag="VEV83_14265"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HYK46338.1"
                     /translation="PNSQLTGTHDPFSIGYEIETGGHVFQLTIGNATGMTEQQYITKT
                     FDRVKFARLHLGFNISRVFTLSRPKGSTANLKSPTEIPAQASTYENSMAISDSGGTHY
                     TEATFKTSRLINGHTVETTQRGVLDFKVTHRFGPISSTGYNLFGLDEAAMRVGADYGV
                     TDRFTIGFGRSTSGKIGTYSGGAFSEKEYDGFLKYKLLRQSTGDKVMPVTVTAFSSVM
                     VDAISEPITISVIHQTDPFTKDTTTAQIEPHWQDRFHFAFQALIARKFSDFFSLQLVP
                     TMVHYNIVDDSTLHNDLYSVGIGARFRLTPRSNINVEYYCRLPEHSLPNTYNSFAIGY
                     EIETGGHVFQLQLTNSYGMVERSFINETRGQWTKGDIHFGFNISRVFTIVKPKPLKM"
     gene            1209..1784
                     /locus_tag="VEV83_14270"
     CDS             1209..1784
                     /locus_tag="VEV83_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK46339.1"
                     /translation="MLYQTRLAIYKNIVFAAAVLMVLGLKSQPVTIYHTTSGRIDFRS
                     DAPLEIIRASSNDLLGFLDISKNNFAFKVTIRSFQGFNSPLQKEHFNENYLESDKYPD
                     ASFKGKIIEDADLTVDGTYEVRAKGNLTIHNVTQERIIKCTVTVKNKIITVQSSFTVL
                     LSDHNIPIPMVVYQKLANEIKVEITAILEPR"
     gene            1786..4653
                     /locus_tag="VEV83_14275"
     CDS             1786..4653
                     /locus_tag="VEV83_14275"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK46340.1"
                     /translation="MNRCLLYIALLLISVQKISIAQNSGGKLYLLENDDVNKPKILTL
                     YQDKQGLILCGTTKGLYRFDGFDFTPYPQEALTSTEVTAIFQTSDNKLWIGYGNGSIG
                     LLSRGEITPIKFEEGLPKVPIRSITQDDAGAVWIATAGEGIYYFKDNRVYNMNEDDGL
                     SDNYVYKIIFIPGHGVIAATDRGINICSVRGNKKNITAFTSKNGLPDNIVRTLYAAEN
                     KYLWLGMQDAGIKAYTYDLETAPAQHNWNYGQVNDIVVANSRVFVATEDSALVVYGYD
                     RNGIVYNNAYVDRTIPKLNCLLRDREGNIWAAGGNQLLRTGKAGMEQLYRLSKQEAEQ
                     VHSLHYTSDSALWFNIAGELMRLFKKNGQWQSEKFKLAGFSNTTITSLYEAPGDNLWV
                     GSLGKGITVFNHAKKTQSVLQDPFLRNSNIISISGKGNIVWITALEGVVQATISDDHI
                     SYVNYTDTAGIGNKYVYHIFPDSKNRVWFATDGDGVSVLDQGKFIHLENQRNYLGNVV
                     YNILEDHAGNIWYATYDKGIVKYDGKKFINYTVEQGLSDAGISGFLNAGQNLAVIHKN
                     SIDIINPLTGRISYLNKAQGEIDINTDLNACTNDNAGNIYFVSNGIIYSYNLPAEETQ
                     QPAVIIDKINLFLNDVDAENGHVFKHNQNNLSFYFTGIYYSQPERISYQYKLENYDKQ
                     WTSTKDRVKVFPDLPPGKYTFRVKASLNKNFTNASETSFSFVISKPFWLQAWFIIISS
                     ALLAALLYGFIKTREKSINRLNTLQNEKIQSQLETLRNQVNPHFLFNSFNILISEIEN
                     NPDIAVTYVEKLSDFYRKIITHRDKDLIPLEDELNILLDYKFLQQKRFASGLAIEVCV
                     TEETINSSYIPPLVLQMLTENAIKHNIVSPTTPLCIRIKETSDGCLAVTNNINKKLQP
                     EKSSGLGLQNIQRRYALLHISKVQIESNDQYFTVKIPLVKK"
     gene            4656..5423
                     /locus_tag="VEV83_14280"
     CDS             4656..5423
                     /locus_tag="VEV83_14280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK46341.1"
                     /translation="MTKILILEDEDAAAKRLQKLIAEAVPDADFLAVIPSVSEGIQWF
                     TAHGAPDLIFADIQLNDGTSFDIFKKIAVKSPVIFTTAFDAHALNAFKLNSVDYLLKP
                     IKKEELKTALEKFKTLYQTGKRQYDDNLQQLVEALQKTPQYKQRFVLRIGEHMKIIEV
                     PDVAYFYTEHKANFIVAKDGKRYLADNTLDQLEELLDPKSFFRINRQFIISYASIAEM
                     FTYSKSRVLIKLNPPSKLDTIVSTERSAAFKAWLSGE"
     gene            5523..5954
                     /locus_tag="VEV83_14285"
     CDS             5523..5954
                     /locus_tag="VEV83_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46342.1"
                     /translation="MKKLLSIAALALFAVSCTRQVNTPSNNDNGNSINSTTVTGNFSI
                     TKFTDNSSVDDHATDFAGYSFQFTNDGKIIATKGSFREEGSYSEKPSHEGEGAKLTIN
                     FSSDALKEISKSWLIVSITDSEIDLRDDDPSSNEVLQFSAL"
     gene            6205..7239
                     /locus_tag="VEV83_14290"
     CDS             6205..7239
                     /locus_tag="VEV83_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HYK46343.1"
                     /translation="MNIRELLDQRILIIDGAMGTMIQQYKLAEADYRGERFKDWPSDL
                     KGNNDLLCLTQPAIIKEIHKQYLEAGADIIETNTFNAQAVSLADYNMQQLSYEINLAA
                     GKIARQAVEEFRLQTSNIKHQTSNSQPFIAGAMGPMNKTLSLSPDVNNPGFRALTFDE
                     AVDAYYEQVKGLVDGGVDLLLVETIFDTLNAKAAIFAIKKYFRDTQQAPLPIMISGTI
                     TDASGRTLSGQTLEAFYVSVMHAKPLSIGLNCALGAQQMRPHIEELSHLASCYVSAYP
                     NAGLPNTMGEYDEQPEETAGFIEDWAKEGFVNIVGGCCGTTPAHIRAIAQRVNGIKPR
                     KLIKQAETLI"
     gene            7292..>9332
                     /locus_tag="VEV83_14295"
     CDS             7292..>9332
                     /locus_tag="VEV83_14295"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HYK46344.1"
                     /translation="MTITGNIINIEPLSTVVEEPAHRPYLRLAGLEPLTVRPESNFIN
                     IGERTNVTGSKKFARLIRDNKYEEALSVARHQVENGAQVLDVNMDDALLDGVSAMTTF
                     LNLLQSEPDIARIPIMIDSSKFEIIEAGLKCVQGKCIVNSISLKEGEQKFIQQAEICR
                     MFGASVVVMAFDENGQADTLQKRIDITGRAYKILTQEVGFDPQDIIFDPNVFAVATGL
                     EEHNNYAVDFIEATRVIKRKMPLVKVSGGVSNLSFSFRGNDHVREAMHSIFLFHAIKA
                     GMDMGIVNAGQLIVYDEIEPELRKVCEDVILNRNNANNEATEKLIGFAETVRKKDKED
                     KKDDAWRNAAVEERLKHALINGITDFIETDTEEARQKYPRPLDVIEGPLMDGMNVVGD
                     LFGSGKMFLPQVVKSARVMKKSVAYLTPFIDAEKLLLTKNNLNFEEQKGAAKILLATV
                     KGDVHDIGKNIVGVVLGCNGYDVIDLGVMVPADKILDTAEKENVDVIGLSGLITPSLD
                     EMVHIAREMKRRNMKQPLLIGGATTSRTHTAVKIAPEYGNGVVHVLDASRSVTVVSNL
                     LSKEQKDQFLQLTQNEYSDLKNQFLNKQKHKVLIPYEEAVVIKERFDWKNYYPTKPAI
                     DDVKVFKDFDLGIVSKYIDWGPFFIGWEMPGHFPEVLSDKIFGVEATRLYNDAQKM"
BASE COUNT         2881 a         1947 c         2132 g         2372 t
ORIGIN      
        1 tgccgaactc gcagttgacg ggcacacacg acccgttttc tatcggctat gaaatagaaa
       61 ccggtgggca tgttttccag cttactatcg gcaatgctac cggcatgacc gaacagcaat
      121 acattacaaa aacttttgac cgggtgaagt ttgcaagact tcatcttgga ttcaacatat
      181 caagagtatt tacgcttagc aggccaaagg gtagtacggc aaatcttaaa tctccaacag
      241 aaattcctgc gcaagccagc acatatgaaa atagcatggc tatctccgat tcaggcggta
      301 cgcactatac cgaagcaact ttcaaaacga gccggcttat taacggccac acggtcgaaa
      361 ctacacagcg aggcgtgctc gattttaaag tgactcaccg gtttggacca attagttcga
      421 caggctataa cctatttggc ttagacgagg cagcaatgcg agttggagcc gattatggag
      481 ttaccgacag gtttacgata ggttttggca gaagcacttc aggcaagatc ggaacctact
      541 caggtggcgc gttttctgag aaggaatacg acgggtttct aaaatacaaa ctattaaggc
      601 aatcaaccgg tgacaaagta atgccggtta ccgtcactgc tttttcatcg gttatggttg
      661 atgcaataag tgaacctata acaatttcgg tcatacacca gacagaccct ttcacgaaag
      721 atactacaac agcacagatc gaaccgcatt ggcaggacag attccatttc gcctttcagg
      781 cccttatagc ccgtaagttt agcgattttt tttctctgca gctcgtgcct acgatggtgc
      841 attataatat cgtggatgat tccacattgc ataacgacct gtactctgtt ggtatcggcg
      901 ccaggttcag gttaactccg cgctcaaata tcaatgtgga gtattattgt cggctacctg
      961 aacatagcct gccaaatact tataactctt ttgcaattgg ctatgaaatt gaaaccggcg
     1021 ggcatgtttt tcaactgcag ttaaccaact cgtatggaat ggtggagaga tcatttatta
     1081 atgaaacaag gggtcaatgg actaaaggtg acattcattt cgggtttaat atttcgcgtg
     1141 tattcacgat cgtgaaaccg aaaccgttaa aaatgtaata ccttttttgc taatgactaa
     1201 cttggcgcat gctttatcag acaaggttgg ctatttataa aaatattgta ttcgctgctg
     1261 cggttctgat ggtattaggg ttgaaatcac aaccagtaac tatttaccat actacgagtg
     1321 gcaggattga tttccgcagt gatgcgccgc tggagatcat aagggcttct tcgaacgact
     1381 tattgggttt tcttgacatc agtaagaaca actttgcttt taaggttaca attcgttctt
     1441 tccagggctt caacagcccg ctgcaaaagg agcattttaa cgaaaactat cttgaatctg
     1501 ataaatatcc ggacgcatcg tttaagggaa aaattatcga agacgcagat ctgacggtgg
     1561 acggtacata cgaagtgcgg gcaaaaggca atttgacgat acataatgtt acgcaagaaa
     1621 ggatcattaa atgcacagtg accgtaaaaa acaagatcat cactgtacaa agcagcttta
     1681 cggttttact aagcgatcat aatataccta taccgatggt ggtctatcaa aaattagcaa
     1741 atgaaatcaa agtggagata acggcgatac ttgagccgcg ataaaatgaa cagatgctta
     1801 ttgtatatcg ccttgttgtt aatttccgta cagaagatat cgatcgccca aaacagtggc
     1861 gggaaacttt atctgctcga aaatgacgac gtcaacaaac ccaagatcct tacattatac
     1921 caggataaac aggggctgat attatgtggc accactaaag gtctttatcg ttttgatggt
     1981 tttgacttta ctccttaccc gcaggaagcc cttacatcaa cagaagtcac cgcaatattt
     2041 caaacgagcg acaacaaatt gtggatcgga tatggcaacg gtagtattgg tttactgagc
     2101 cgcggtgaaa ttacgccgat caaattcgaa gagggtctgc ctaaggtgcc catcaggtcg
     2161 ataacacagg atgacgccgg cgctgtatgg atcgcaactg cgggggaagg catctattat
     2221 tttaaggaca acagggttta taacatgaac gaagatgatg gcctgagtga taactatgtg
     2281 tacaaaataa ttttcattcc gggacatggc gttattgctg caactgaccg cggaataaat
     2341 atttgctcag tacgaggcaa caagaaaaac ataaccgcat tcacttccaa aaacggattg
     2401 ccggataata tcgtaagaac cctgtacgcc gcagaaaaca aatatttgtg gcttggcatg
     2461 caggatgccg gaattaaggc gtacacctat gatctggaaa ccgcaccagc tcaacataat
     2521 tggaactacg gccaggtaaa cgatattgtc gtggcaaact cccgggtatt tgttgcaaca
     2581 gaggactcag ccctggtggt gtatggctat gatagaaatg gcatcgttta taacaatgct
     2641 tatgtggacc gcaccatccc aaagctgaac tgtcttttga gggaccgcga aggaaacata
     2701 tgggcggctg gcggtaacca gttgttacgt accggcaaag caggaatgga gcaactgtat
     2761 cgtctgtcta aacaggaggc cgagcaagtg cacagccttc actacacaag cgattctgcg
     2821 ctatggttta acatcgccgg tgaactcatg cgattgttca agaaaaatgg tcagtggcag
     2881 agtgaaaaat ttaagcttgc aggcttttcc aacaccacga tcacgtcgct ctacgaagcg
     2941 cccggggata atctttgggt aggatctctg gggaaaggga tcactgtttt taatcatgcg
     3001 aaaaagactc aaagcgtgtt gcaggatccg tttctccgga acagcaacat catttcaata
     3061 agcggaaaag gaaatatagt atggatcacg gccctcgaag gtgttgtgca ggcgacgatt
     3121 tcagacgatc atatcagtta tgtgaattac actgacacgg caggcatcgg aaacaagtac
     3181 gtttatcaca ttttccccga cagtaaaaac cgcgtttggt tcgctaccga cggagatggc
     3241 gtttcagtgc tcgaccaggg gaaattcata catctcgaaa accagcgcaa ttacctgggc
     3301 aatgtcgttt ataatattct tgaagatcac gcaggaaata tatggtatgc tacttacgac
     3361 aagggcatcg taaaatacga cggtaagaaa tttatcaact atacagttga acagggtttg
     3421 agcgatgcgg gcatttctgg tttcctgaac gcaggccaaa acctggcagt gatacacaag
     3481 aacagtatcg atatcattaa cccgttgacc ggcaggatca gttatctcaa caaggcgcag
     3541 ggcgagatcg atatcaacac cgatctgaac gcatgcacca atgacaatgc aggaaatatt
     3601 tattttgttt caaacggaat aatctatagc tataatctgc ctgccgaaga aactcaacaa
     3661 cctgcagtga tcatcgataa gataaatctt tttctcaacg atgttgatgc agagaacggc
     3721 catgtgttta agcacaatca aaataacctg agcttttact ttaccggcat ttattattcg
     3781 cagcctgaaa gaatttcgta tcagtataag ctggagaatt atgacaagca atggaccagc
     3841 accaaagacc gcgttaaagt atttccggat ctgccgccgg gcaaatatac ttttcgcgta
     3901 aaggcttcgc tgaataagaa ttttaccaac gcgtcggaga catcattttc gtttgttatc
     3961 agcaaaccgt tctggttgca agcgtggttt atcatcatta gctccgcatt gcttgccgct
     4021 cttttgtatg gcttcataaa aacgcgcgag aagagtatta acaggctgaa tacattgcaa
     4081 aatgaaaaga tacaatcgca gttggaaact ttgcgcaacc aggtaaatcc gcattttctt
     4141 ttcaatagtt tcaatatcct gatatcagag attgaaaaca accccgacat agcggtcact
     4201 tacgtggaaa agctttctga tttttatcgc aagatcatca cacaccggga caaagatcta
     4261 attccgttgg aagatgaatt gaatatcctg cttgattata aatttttaca gcaaaaaaga
     4321 tttgcatcgg ggctggcaat tgaagtttgc gtaactgagg aaacgatcaa ttcgtcatac
     4381 ataccaccgc ttgttttgca aatgctcact gaaaacgcta tcaaacataa tattgtttca
     4441 ccgaccactc cattgtgtat tcgcatcaaa gagaccagcg atggctgttt agctgttaca
     4501 aataacatca acaagaaact ccagcccgaa aaaagcagcg gccttgggtt gcaaaatatt
     4561 caaagaagat acgcgctgtt gcacatcagc aaagtgcaga tcgaaagcaa tgaccagtat
     4621 ttcactgtga aaattccttt ggtaaaaaaa taattatgac aaagatcctg atacttgaag
     4681 atgaggatgc agctgcaaaa aggctgcaga aattgatcgc tgaagcggtg cctgatgccg
     4741 attttcttgc ggtgatccca agcgtcagcg aggggataca gtggttcacc gcgcacggtg
     4801 cgccggacct gatttttgcg gacattcaat tgaatgacgg aaccagtttc gacatcttta
     4861 aaaaaattgc ggtaaaaagc ccggtcatct tcaccactgc ttttgacgca cacgcactca
     4921 acgcctttaa gttgaacagt gtagactacc tgctcaagcc gatcaagaag gaagagttaa
     4981 agaccgcatt agaaaaattt aaaacgcttt atcaaaccgg aaaaagacaa tacgacgata
     5041 acctgcaaca attggtggag gccctgcaga aaacgcctca atataaacaa cgctttgttt
     5101 tgcgcatcgg cgaacacatg aagatcattg aagtgcctga cgtagcctat ttctataccg
     5161 aacacaaagc gaacttcatc gttgcaaaag atggtaagcg ctaccttgct gacaacaccc
     5221 tcgatcaatt ggaggaacta ctcgatccca aaagtttctt caggataaac cgccaattca
     5281 ttatcagcta tgcatctatt gcggaaatgt tcacctattc gaaatcccgc gtgctgataa
     5341 aattaaatcc tcccagtaag cttgacacga tcgtaagcac agaacggtcg gcggcattta
     5401 aggcgtggct ttcaggtgaa taacgaatta agccggctca gcagatattt ttaccgtttc
     5461 gaatatgttc attcttttaa cgatgcttgc cgccgcaatt ttacagcaga aaaaagaaac
     5521 acatgaaaaa attactcagt attgccgcac tcgcactttt cgcagtatcc tgtaccaggc
     5581 aggtaaacac gccatcaaat aatgacaatg gcaatagcat caatagcacc accgttaccg
     5641 gaaatttctc aataacgaaa ttcaccgaca attcgtccgt ggatgaccac gctacggact
     5701 ttgccggtta cagctttcaa tttacaaacg acggaaagat cattgccaca aaaggaagtt
     5761 ttagagaaga aggcagctac agcgaaaagc catctcatga aggcgaagga gctaaactca
     5821 ccattaattt tagcagcgat gctttgaaag agatcagcaa aagttggctt atcgtaagca
     5881 tcacagactc agaaattgat ttgagggacg atgacccgtc gagcaacgaa gtacttcaat
     5941 tttctgcgtt atgaccgcag aatatctatg ataaacagcc tagcccgttt ttgttagccg
     6001 cagccatttg gttttgcggc tttcttattt tatttttgcg ccacaggcag atttgtttat
     6061 tgttcggcct ggtacagtta aactgaacta ataaacgtca aaacttcact tcataagttt
     6121 ccacgtttag atcaggcagt ttttgtgtag cagcagaaca gttgcatgtg ccctgatatt
     6181 cgttcagact aaaaaatgaa ttctatgaac atccgtgaac ttttagatca gcgcattttg
     6241 atcatcgatg gcgccatggg tactatgatc cagcagtata aactggcgga agctgattat
     6301 cgtggggaac ggtttaaaga ctggccttcg gatctaaaag gcaataatga cttattgtgt
     6361 ttgacgcaac cagctattat taaagaaata cacaaacaat atctggaggc gggtgctgac
     6421 attattgaaa cgaacacgtt caatgcgcaa gcggtctcgc ttgcagatta caatatgcag
     6481 caactttctt atgaaatcaa cctggctgcc ggaaaaatcg caagacaagc cgttgaagaa
     6541 ttcagacttc aaacatcaaa catcaaacat caaacatcaa actcacaacc cttcatagcc
     6601 ggcgccatgg ggcccatgaa taaaacatta tcactttccc cggacgtaaa caatcctggt
     6661 tttcgcgcct taactttcga tgaggcagta gatgcctatt atgaacaggt gaaaggcctg
     6721 gtagacggcg gcgtggatct gctactggtt gaaacgatat tcgacacgct gaatgcaaag
     6781 gcggcgatct ttgcaataaa aaaatatttc cgcgatacac agcaggcgcc gctaccaata
     6841 atgataagtg ggacgatcac agatgcgagc ggaagaacac taagtggtca aacactcgag
     6901 gcattttatg tatcggtgat gcatgcgaag cccttgagca taggattgaa ttgcgcgtta
     6961 ggcgcacaac aaatgcggcc gcatatcgaa gagctttcac atctcgcttc atgttatgta
     7021 tctgcgtatc ctaatgcagg tcttcccaac acaatgggcg aatacgatga acaacccgaa
     7081 gaaacggcag gtttcatcga ggattgggca aaagaaggtt ttgtgaacat tgtgggcggg
     7141 tgttgcggaa ctacgccagc gcatattcgc gcgatcgctc aacgcgtaaa cggtattaag
     7201 ccaagaaaac ttattaaaca ggccgaaaca ctgatttgat caatcacgga ggctgtctcg
     7261 attgtgaccg aacaaataag cgaattataa gatgacgata actggtaaca taataaatat
     7321 tgaacctctt tctactgtcg tcgaggaacc ggcccacagg ccctatttgc gcctcgcggg
     7381 gcttgaacca ttgactgtac gccctgaatc aaacttcatc aatataggag aacgcacgaa
     7441 tgttaccggt tcaaaaaaat tcgcgcggct gatccgtgac aacaaatatg aagaagcgct
     7501 cagcgtggcg cgccaccagg ttgaaaacgg cgcacaggta ttggatgtga acatggacga
     7561 tgcgttactc gatggcgtgt cggcaatgac cacatttcta aatttgttgc aaagcgaacc
     7621 ggatattgcg cgcatcccga tcatgatcga ttcgtcgaag tttgagatca ttgaggccgg
     7681 gttgaaatgc gtacagggga aatgtattgt gaattcaatc tccttaaaag agggcgagca
     7741 aaagtttatt caacaggcag agatctgcag gatgtttggt gcatcggttg ttgtaatggc
     7801 ttttgatgaa aacggccagg cggatacttt gcaaaaacgt atcgacatca cggggcgtgc
     7861 atataaaatt cttacgcagg aggtgggatt tgacccgcaa gacataatct ttgatcccaa
     7921 cgtcttcgcg gtcgctacag gtttggagga acacaataat tacgctgtcg actttattga
     7981 agccacacgc gtcatcaagc ggaaaatgcc tttggttaaa gtgagtggtg gcgttagtaa
     8041 tctttcattt tcgtttcgcg gcaacgacca cgtgagggaa gcaatgcaca gtattttctt
     8101 attccacgcc attaaggcgg gcatggatat gggtattgtg aacgccggcc agttgatcgt
     8161 gtatgatgag atcgaacctg agctaagaaa agtttgcgaa gatgtaattc tcaatcgcaa
     8221 caatgccaac aacgaagcca ctgaaaagct tattgggttt gctgaaacag ttaggaaaaa
     8281 agacaaggaa gataaaaagg atgacgcatg gcgaaatgca gccgtagaag aaagattaaa
     8341 acatgcgctt ataaacggca tcacggattt tatcgaaact gatacagaag aagcacgtca
     8401 aaagtatccc aggcctttgg acgtgattga agggccgttg atggacggca tgaatgtcgt
     8461 cggcgacctg tttggcagcg gaaaaatgtt tctgccgcag gttgtgaaaa gtgcgcgggt
     8521 catgaaaaaa agcgtggctt atctaacgcc gtttattgat gcagaaaaac tcctgttaac
     8581 caagaacaat ttgaatttcg aggaacagaa gggggcggcg aaaattttgc tggcaaccgt
     8641 aaagggtgat gtgcacgaca ttggaaaaaa tatcgttgga gttgtgttag gttgcaacgg
     8701 gtatgatgta attgatcttg gggtgatggt gccggcagat aaaattttgg atacagcaga
     8761 aaaagagaat gtggatgtta taggcttaag cggattgatt acgccttctc tcgacgaaat
     8821 ggttcacatt gccagggaga tgaagagaag aaatatgaag cagcccttat tgataggtgg
     8881 agctactact tctcgaacgc atacagcagt aaaaattgct cccgagtatg gaaatggtgt
     8941 agttcatgta ttggatgcat caagaagcgt gaccgttgta agtaatttat tgagcaaaga
     9001 acaaaaagac cagtttttac agctaacaca aaatgaatac agcgatctta aaaaccaatt
     9061 tttaaataag caaaaacaca aagttctcat tccttacgaa gaggcagtag tgattaagga
     9121 acgctttgac tggaaaaatt attaccccac aaagcccgct attgatgacg taaaagtgtt
     9181 caaagatttt gatttgggaa ttgtttcaaa atatattgat tggggtccat tctttatcgg
     9241 ttgggaaatg ccaggacatt ttcctgaagt acttagtgat aaaattttcg gcgttgaagc
     9301 gactcgtttg tataatgatg cacaaaaaat gg
//
LOCUS       DASQJI010000524         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_63671,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000524 DASQJI010000000
VERSION     DASQJI010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63671"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VEV83_14300"
     CDS             <1..312
                     /locus_tag="VEV83_14300"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK46345.1"
                     /translation="ISLYALVQYPNVFGGAGIFSPAFWVVPQLFTDVQNTKWKKDLRI
                     YFYAGEKESSQMVPDMQKMLDIIKEKKCCTTEFVTSPVGEHKEKYWRDEFDDFYRWIM
                     R"
     gene            complement(549..>1961)
                     /locus_tag="VEV83_14305"
     CDS             complement(549..>1961)
                     /locus_tag="VEV83_14305"
                     /inference="COORDINATES: protein motif:HMM:NF019260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase-like domain-containing
                     protein"
                     /protein_id="HYK46346.1"
                     /translation="VQVEGLIYASSGFHWKGDGKGTKWFVPGREYARFGLDTCPCESW
                     RWAKDEHFIHEAVEAYAKVYPNLKMHDANYPAPDELRSKIRYGNIEFDGDISKDSPGS
                     DLIKSLMLDDKPGPLFITAWGGQSTIARALKSIQEQYEYTTEWEQIKKKIARKVILLP
                     SGDQDDTYANYIKPNWPDIDYRQFTGGPNYGYGAQLRAKPEDSTYLTATWMKENISDR
                     GPLGALYRVWGDGKQMVKGDKMDYFGLSGYTDDQLRKMGYVVWMPVQTKGSWLGEGDD
                     FTFMNMLGNGLRAYQAASYGGWGGRALSDRDEQNFSFQMSDTSQQAMASALSSMNTQS
                     NKAANIYPDFFPAAQQDFAARLKWSVTPKYTDANHQPVIKIEGPLAVLASPAETIRLN
                     GNVSDPDGNSVSIKWWQFHVGTYQGSVDISNANSAQAKVTIPKDAVGGQTIHVMIEAT
                     DNGTPALTSYQRIIITVRSK"
BASE COUNT          501 a          466 c          416 g          578 t
ORIGIN      
        1 atctcgctgt atgcgcttgt tcaatatccg aatgtatttg gcggagccgg tatattttca
       61 cccgcttttt gggttgttcc gcagctgttt acggatgttc aaaacacaaa atggaaaaaa
      121 gatctgcgca tctattttta tgcaggagag aaggagagta gccagatggt acccgatatg
      181 caaaaaatgc tggacatcat caaagaaaaa aaatgttgca ctaccgaatt tgttacatcc
      241 ccggtgggag aacataaaga aaagtactgg cgggatgagt ttgatgattt ttaccggtgg
      301 attatgcggt gagtgtttga agtttgaggt ttgatgtttg aggtttgaag ttagttgatt
      361 ggtttattag ttgattgggt tattgggaac ggaatgattc taggacacag cgtcatcacc
      421 tgatcaccga atattttcgt tgctcgcgaa agatagaagg aaatcctgtt catttcaata
      481 tccgattgaa gcaacaattt cgaaattgaa acagccattc accattgaca attcacaatt
      541 cacaacattc atttactcct tacagtaata attattcgct gataacttgt aagagccggt
      601 gtgccattgt cagttgcttc aatcatcaca tgaatcgttt gtccgcccac cgcgtctttc
      661 gggatggtta ctttagcttg cgctgagttc gcgtttgaaa tatccacaga accctgataa
      721 gtccctacat gaaattgcca ccatttaatt gaaactgaat ttccatcagg atcagagaca
      781 tttccattca atcttatcgt ttctgcgggc gatgctaaaa cggcgagagg cccctcaatt
      841 tttatgacag gctgatgatt cgcatctgtg tatttcggtg ttactgacca tttaagccgg
      901 gctgcgaaat cctgttgcgc cgccggaaaa aaatcggggt atatatttgc tgctttgttt
      961 gactgcgtgt tcattgaact gagagctgat gccatcgcct gttgagatgt atcgctcatc
     1021 tggaacgaaa aattttgctc gtcgcgatca ctcaacgcgc ggccgcccca accaccgtac
     1081 gaagcggctt gatatgcgcg caggccgtta ccgagcatat tcataaacgt gaagtcatct
     1141 ccctctccga gccacgaccc tttcgtctgc acgggcatcc acaccacata gcccattttc
     1201 cttagttgat cgtcggtgta accggataaa ccgaaataat ccatcttatc acccttcacc
     1261 atttgttttc catcacccca aacacggtat aacgcgccta acggtccgcg atccgatatg
     1321 ttttccttca tccatgttgc tgtcaggtaa gttgaatcct ccggtttagc acgcaattgc
     1381 gcaccatagc cataattggg gccaccggtg aattgccggt aatcgatatc cggccaattg
     1441 ggtttgatat agttcgcata agtatcatcc tggtcgcccg atggcagaag aattactttt
     1501 cgcgcgatct tctttttgat ctgttcccac tcagttgtgt attcatattg ctcctggata
     1561 gatttaagtg cgcgcgcgat agtgctctgc cctccccatg ctgtaataaa caacggtccc
     1621 ggtttatcat ctagcatcag tgacttgatg agatctgagc ctggtgaatc tttagaaata
     1681 tctccatcga actcaatatt cccataacgg atctttgatc gcagctcatc aggcgcaggg
     1741 taatttgcat catgcatctt caggttcgga tacacttttg catatgcttc aaccgcttca
     1801 tgaataaaat gctcatcttt agcccagcgc catgattcgc acggacaagt gtctagtcca
     1861 aaacgcgcat attctcttcc gggaacaaac cattttgtcc cttttccatc tcccttccaa
     1921 tggaaaccac tactggcata gatcaatcct tcaacctgca c
//
LOCUS       DASQJI010000525         4519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_832572,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000525 DASQJI010000000
VERSION     DASQJI010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4519
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832572"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VEV83_14310"
     CDS             complement(<1..818)
                     /locus_tag="VEV83_14310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HYK46347.1"
                     /translation="MHCILIADSGSTKCEWCLLDDGRKKTIITKGISPYFLKKEDISL
                     LLQKELLPKLKQVKIDNIFFYGTGLKDDNNKRLLRSVLKHLFPFADVEVQTDLLAAAR
                     ALCKNGKGISCILGTGSNSCYYNGRRIIKNSPGLGFILGDEGSGAYLGRKVVQHFLYN
                     TFDEELMLAFKKKYNTSDTEILEGVYRQPQPNRYLASFSLFLAENRGHYMIENIIEDG
                     LNDFFFTHLCKYNESWLYPIHFTGGVAYGFRDVIKELCHSYEMELGVILKRPMDG"
     gene            918..2507
                     /locus_tag="VEV83_14315"
     CDS             918..2507
                     /locus_tag="VEV83_14315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYK46348.1"
                     /translation="MVRKKVQVWLPLILSVIMVAGMFIGYQLREKTSGGDSFLQNSDR
                     TPLQQAISLVENKYVDKVNVDSLEQPAINGLLDHLDPHSVYIPAEDLQSMNEDLQGNF
                     EGIGVEFQIIKDTVNVMNVIPDGPSYKAGVEIGDKILKVNNDVNLTGKDVDPDDVRKQ
                     LRGPKGSQVKITVFRNASLKTLDITRGTIPLFSLDAAYMLNANTGYIKLNKFAETTYR
                     EFMQALEKLKQEHMQQLVLDLRDNGGGIMQEAIQIADEFLDGDKLIVYTQGLHSPRSD
                     YRCEKEGMFETGKLAVLVDETSASASEILAGALQDWDRATIIGRRTFGKGLVQQQFNL
                     SDNSALRLTVARYYTPLGRNIQKPYDKGREQYEEELINRFHNGEVVVGDTAKPSGQAF
                     KTPKGRIVYGGGGITPDVFVAYDTTQQPSAVMQLYYKNTLRDFVYNYFVEHRAQLEQY
                     KSPEQLYKQFHAGEAEWNQLKAAAQKDSIDLSRLSPTAKNFVLGQMENLLARQIWRTE
                     GFYELANVNDPMIKKALAVLQ"
     gene            2538..3401
                     /locus_tag="VEV83_14320"
     CDS             2538..3401
                     /locus_tag="VEV83_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HYK46349.1"
                     /translation="MIKRSTIQLLRVPFSFFLMPVFWFALSFVNEINISHAILLFIII
                     HVLLYPSSNGYNSYMDRDTGSIGGLEKPLQPTNQLFVFTVIMDIMSILLAFIISPLTA
                     FLIFVYIVCSRLYSYRDIRLKQYAIPGYLIVIVNQGGLIFFTVFIAVNKDTSAAIPWL
                     GIVCATLLIGGFYPITQIYQHKDDAADHVRTISMMLGKKGTFIFCTVVYLLAFSLLFF
                     YYNSVNKVLYFWIVQLFFVPVLIYFVVWFLQVNKNEENADFRHTMRMNKLASTLTNLA
                     FITLLILNQLD"
     gene            3394..4482
                     /locus_tag="VEV83_14325"
     CDS             3394..4482
                     /locus_tag="VEV83_14325"
                     /inference="COORDINATES: protein motif:HMM:NF012421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HYK46350.1"
                     /translation="MIEIISIGTAVPPHSFQQRDVIPLMQKVYGLDAKEGRKLAFMYR
                     HSEIETRYTILADYTHSNEERWNFISASQDEPLPNLDERMKIYNREALPLSLQAINDC
                     IEDRVTPQDITHLITVSCTGMSAPGLDLQIAEAMNMRPEVFRTSVNFMGCYGAVHALK
                     LAKLICDSTPRSNVLIVATEFCSIHFQKEYTPDSASSTILFADGSAAVLISNCIQSEK
                     NIQLIDFYSKVAYRGKKDMAWELSHKGFIITLSSFIPDLIEQDIATLVEEAAQHSGLE
                     VKDFTHWCIHPGGKKILNAISEQLHLSDEEMRFSRSILSKYGNMSSPSVLFVLKEIFE
                     SINDEPATIFGTAFGPGLTMETFLCRKP"
BASE COUNT         1301 a          963 c          988 g         1267 t
ORIGIN      
        1 ccatccattg gccgtttgag gatgacgccc agttccattt cataactgtg gcagagctct
       61 ttgatcacat ctctaaagcc gtaggccaca cccccggtga aatggatcgg gtatagccag
      121 ctttcattgt atttgcacaa atgcgtgaag aaaaagtcat tcaggccatc ttcgatgatg
      181 ttttcgatca tataatgacc ccggttttca gcgaggaata aagaaaatga agcgagataa
      241 cgattcggtt gtggctgcct gtaaacacct tcaaggatct ctgtatcgct ggtattatat
      301 ttttttttaa aggcaagcat cagttcttca tcaaacgtat tatacaaaaa atgttgaact
      361 accttcctgc caagataggc gccgctgcct tcgtcgccga ggataaagcc gagcccggga
      421 ctgttcttta tgatccttct tccgttataa taacaagagt tcgaaccggt accgaggata
      481 caacttattc cttttccatt tttacataaa gctcttgcgg ccgcgagcag atcagtttgc
      541 acttccacat cggcaaatgg aaataaatgt ttcaacacag aacgaagaag acgtttgtta
      601 ttatcgtctt tcaagccggt gccgtaaaaa aatatattat caattttaac ctgtttgagc
      661 ttgggtaaaa gttctttttg aagtagtaaa gaaatgtctt cctttttcag aaaataaggg
      721 cttattcctt tggtaataat cgtcttcttc cttccatcat ccaataaaca ccattcacac
      781 ttagtcgacc cgctatcagc aatcagtata cagtgcatga atcaattata ttagttttac
      841 aaaactcaat cgatgagtaa caggtttatt ttagatattc gtgttttact gcatcaagat
      901 acaaagaagc attcattatg gtacgtaaaa aagtacaggt gtggctgccg ttaatacttt
      961 ctgtcatcat ggttgcgggt atgtttatcg gctaccagtt gcgggaaaaa acatcgggtg
     1021 gcgattcgtt tttacaaaac agtgaccgaa cgccattgca gcaagcgatc agtctcgtag
     1081 aaaacaaata cgttgacaaa gtaaacgttg acagccttga acagcctgct atcaacgggt
     1141 tactcgatca tttggatccg cattccgttt atatacctgc agaagatctg caaagtatga
     1201 atgaagatct gcagggaaat ttcgaaggca tcggtgtaga attccagatc ataaaagaca
     1261 cggtgaacgt gatgaacgtt atccccgatg gaccttccta taaagcgggc gttgaaatcg
     1321 gcgataaaat actgaaagta aataatgacg taaatctaac aggcaaagat gttgatcccg
     1381 acgatgtgcg caagcagttg cgcgggccaa aaggttcaca ggtaaagatc accgtgtttc
     1441 gaaatgcttc gttgaagacg ttagatatca cccgcggcac tattccgctt ttttcgctgg
     1501 atgccgccta catgcttaac gccaacacgg gctacataaa actgaataag tttgcagaga
     1561 ccacgtaccg tgaattcatg caggcactgg aaaagctaaa gcaagagcat atgcagcagc
     1621 ttgtgctcga tcttcgggat aatggcggcg gcatcatgca ggaagcaatt cagatcgcag
     1681 atgaatttct cgatggcgac aaacttattg tttatacgca agggctacac tctccgcgtt
     1741 ccgactatcg ttgtgaaaaa gagggaatgt tcgaaacagg taaacttgcc gtgttggttg
     1801 atgaaacttc tgcttcagcg agcgagattc ttgcaggcgc gttgcaggac tgggaccgtg
     1861 caactatcat tggccgaaga acatttggaa aaggattggt acagcagcag ttcaatttat
     1921 cggataattc ggcgcttcgc ctcactgtgg ccaggtatta cactcctctc ggcagaaata
     1981 ttcaaaagcc ttacgacaaa ggaagagagc aatacgaaga agaacttata aacaggtttc
     2041 ataatggcga agtcgttgtt ggagacactg cgaaaccatc gggccaggct tttaaaacac
     2101 caaagggcag aattgtatac ggcggcggcg ggatcactcc tgacgttttc gttgcgtacg
     2161 ataccacaca acaaccctct gcagtgatgc agttgtacta taagaacaca ctgagggact
     2221 ttgtatataa ctactttgtt gaacaccgcg cgcagttaga gcagtacaaa tcacccgaac
     2281 aactatacaa acagtttcat gccggagaag cagaatggaa tcaattgaag gccgctgcac
     2341 aaaaagattc aatagacctt agcagactat cgcccactgc aaaaaatttc gtgctcggcc
     2401 aaatggagaa tttgttggca aggcagatct ggagaacaga agggttttat gaattggcga
     2461 atgtgaacga tccgatgata aagaaagcgc ttgcagtgtt acagtagtgt ccgctaactg
     2521 cctttcatat attaagtttg ataaaaagat ccacaataca attgctgcgt gtcccctttt
     2581 cgttttttct gatgccggtg ttttggttcg ctttatcgtt cgtcaatgag ataaacatca
     2641 gccacgcgat tctccttttt atcattattc acgtcctttt atacccctcc agtaacgggt
     2701 acaacagtta catggaccgg gacacgggaa gcatcggcgg attggaaaaa cctttgcaac
     2761 caaccaacca actatttgtt tttacggtta taatggatat catgagcata ttactcgcat
     2821 tcattatttc tcctttgacg gcgttcctca tttttgttta catcgtttgt tcgcggctgt
     2881 acagctatcg ggatatccgc ctaaaacagt atgcaatccc cggatatttg atcgtgatag
     2941 ttaaccaagg aggactcatt ttcttcaccg tttttattgc agtgaacaag gataccagcg
     3001 ctgcgattcc gtggcttggt atcgtttgcg caactttact catcggcggc ttctacccta
     3061 tcactcaaat ttatcagcac aaggatgatg cagctgacca cgtgagaacg atcagtatga
     3121 tgctgggaaa aaagggaacg ttcatctttt gcactgttgt gtatttattg gcgttctctc
     3181 ttttattttt ttattacaat tcggttaaca aagttcttta cttctggatc gtgcagctat
     3241 tttttgtacc cgtgctgatt tattttgtgg tatggttttt acaggtgaat aaaaacgaag
     3301 agaatgcgga tttcaggcat acgatgcgta tgaataaact tgcgtccacc ttaactaact
     3361 tagctttcat aacactttta atattgaacc agcttgattg aaattatttc gataggaaca
     3421 gcggtaccac cgcacagttt tcagcaaagg gatgttatac cgttgatgca aaaagtttac
     3481 gggcttgatg cgaaagaagg gcgcaagctg gccttcatgt accgccacag cgagatcgaa
     3541 acccgctata cgatcctcgc tgactatacg cattcaaacg aagagcgctg gaattttatt
     3601 tctgcttcgc aggatgagcc tttgccgaac ctcgacgaac gcatgaaaat ttataatcgg
     3661 gaagcattgc ctttatcgct gcaggcgatt aacgactgta tagaagaccg cgttacgccg
     3721 caggatatta cacacctgat aacggtaagc tgtaccggca tgagtgctcc gggccttgac
     3781 cttcaaattg ctgaagcgat gaacatgcgg ccagaagttt tcagaacgtc tgtaaacttc
     3841 atgggttgtt acggtgctgt tcacgctttg aaacttgcga agctaatttg cgacagcaca
     3901 ccgcgttcaa atgtgctcat cgttgctaca gaattttgtt ctattcattt tcagaaagaa
     3961 tatacacccg acagtgcttc gagtaccatt ctctttgccg atggaagcgc agcagtactc
     4021 atttcaaact gtattcaatc tgaaaaaaat atacagctca tcgatttcta ctcgaaagtt
     4081 gcttaccgcg gaaaaaaaga catggcatgg gaattaagcc ataaaggatt tattattacg
     4141 ctgagcagtt ttatcccaga cctgatcgaa caggacattg ccacactggt ggaagaggct
     4201 gctcaacatt cgggtcttga agtaaaagat ttcacgcatt ggtgtattca tcccggtggc
     4261 aaaaagatat taaatgccat cagcgagcaa ttgcatttga gtgatgaaga aatgcgtttt
     4321 tcgaggagca tcctgagcaa atatggtaat atgtcgtcgc ctagcgttct gtttgtactg
     4381 aaagaaattt ttgagagcat caacgatgaa cctgccacaa tttttggaac tgcttttggt
     4441 cccggtttaa ctatggaaac gttcttatgc aggaaacctt agaccttcgt tatcgttcct
     4501 acaaaaaaga attactcga
//
LOCUS       DASQJI010000526         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1907275,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000526 DASQJI010000000
VERSION     DASQJI010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907275"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VEV83_14330"
     CDS             complement(<1..283)
                     /locus_tag="VEV83_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK46351.1"
                     /translation="MHIRMSGTGEKKYFNVSVLKRVFEFVRPYRWRFIVSVILAIVLS
                     FFTPVRPHFIQLTVDKATGKAVHTPWIIQLLFPHTQLNDAWQFVIAVTIF"
     gene            495..>2098
                     /locus_tag="VEV83_14335"
     CDS             495..>2098
                     /locus_tag="VEV83_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HYK46352.1"
                     /translation="MTTEQAAQEIVLPKYNLTEEQEKRLILRQYRALLKVLGPKLKKG
                     DEELIRRAFEISADAHKTMRRKSGEPYILHPIAVAMICVEEIGLGVRSTICSLLHDTV
                     EDTDVTIEDVEREFGTEIARIVDGLTKISNVIDTNSSQQAENFKKILLTLTDDPRVIL
                     IKLADRLHNMRTLDYMKGEKQLKISSETVYVYAPLASRMGLYNIKTEMEDLAMKYLEP
                     EAYKDIAQRLAETKRERSRYINEFIKPIKDKLRKGGFEFDIYGRPKSIHSIWNKIKKK
                     GVDFDEVYDLFAIRIIVYSSPEKEKEDCWKVYSLITDEYMPSPERLRDWLSNPKSNGY
                     EALHTTVMGPQGRWVEVQIRTNRMNEIAEKGLAAHYKYKEGSNDEDRFDKWFAQIREV
                     ISSQDTDSVDFLQDFKTSFLAEEIYVYTPKGDVKMLPVNSTALDFAFAIHSAVGSRCI
                     GAKVNHKLVPISHKLRSGDQVEIITSNKQKPSDAWLKFVVTAKAKSKIKDSLKEEKRK
                     IADDGKYILQKKLEGVGAALNQHNID"
BASE COUNT          670 a          425 c          512 g          491 t
ORIGIN      
        1 ggaatatggt aaccgcgatc acgaattgcc aggcgtcgtt tagttgggta tgcggaaata
       61 atagttggat gatccacggt gtatgaactg cttttccggt tgctttatca acagtgagct
      121 gaataaaatg cggacgaaca ggtgtaaaga aggaaagaac gatggcgaga ataacgctta
      181 caataaaacg ccatcggtat ggtcttacaa attcaaatac acgctttaga accgaaacat
      241 taaagtattt tttttcaccc gtgccactca tacgaatgtg caaaggtaaa gtttgatgtt
      301 tgatgttcga agtttgaggt ttgaggtttg aggttgatta attggtttat gggtttattc
      361 ggttatcggt gagcgtccgt caggcacggt tcatgtttgt ttcacttgtg acgtctcaca
      421 tttcaccatc aagcatcgcg ccttaaccag ctgttaaaat cttcattggc gccattgtcg
      481 taaattcgtg aagtatgacc acagagcagg cagcacagga aatagtattg ccgaaataca
      541 accttacgga agaacaggaa aagcggctca tcctacggca atatcgcgcg ttattaaaag
      601 tgctgggccc gaaattgaaa aaaggcgacg aagagttaat caggcgcgca ttcgaaatat
      661 cagcggacgc ccataagacg atgcgtcgta aaagcggaga accttatatc cttcatccta
      721 tcgcagttgc aatgatatgc gtggaagaga tcggccttgg ggttcggtca acgatttgtt
      781 ctcttctcca tgacacagtg gaagacaccg atgtaactat tgaagatgta gagcgcgaat
      841 tcggtactga aatagcacgc atcgttgatg ggctcacaaa aatttcaaac gtaattgaca
      901 cgaacagtag ccagcaggct gaaaacttca aaaagatatt attaacgcta accgatgacc
      961 cgcgtgtgat cctcatcaaa ctcgcggaca ggctgcataa catgcgcacg ctcgattaca
     1021 tgaagggcga aaagcagtta aagatctcca gtgaaacggt ttatgtatac gctccacttg
     1081 catcgcgcat gggattgtac aacatcaaga ccgaaatgga agacctggcg atgaaatatc
     1141 tcgaacccga ggcatacaag gacatcgcac aaaggctggc ggaaacaaag agagaacgta
     1201 gtcggtatat aaacgaattc atcaaaccaa taaaagacaa gctcaggaaa ggtggttttg
     1261 aatttgacat ttacggcagg ccaaaaagca ttcattcgat ctggaataaa ataaaaaaga
     1321 aaggtgttga tttcgatgaa gtatacgatc tctttgcgat caggatcatc gtttattctt
     1381 cacctgagaa agagaaagag gattgctgga aggtttactc attgatcacc gacgaataca
     1441 tgccgtcgcc cgaacgctta cgcgactggt taagcaatcc taaaagcaac gggtatgaag
     1501 ctttgcacac aacggtgatg ggtccgcagg ggcgttgggt tgaagtgcag atacgaacga
     1561 accgaatgaa tgagatcgcg gaaaaaggtt tggctgcaca ctacaagtac aaggaaggca
     1621 gtaatgacga agatcgtttc gataaatggt ttgcccagat tcgggaagtc atcagcagcc
     1681 aggacacaga cagcgtcgat tttctgcagg attttaaaac tagctttctt gccgaagaaa
     1741 tatacgtgta cacaccaaag ggtgacgtta agatgctgcc tgttaatagt acggcccttg
     1801 attttgcctt tgcgatccac tcggctgtag gaagccgttg tataggagcg aaggtgaatc
     1861 acaaactcgt tcccatcagt cataaattga gaagtggaga ccaggtggag atcatcacca
     1921 gcaataaaca aaaaccttcc gacgcgtggc taaaattcgt cgttaccgca aaggcaaaaa
     1981 gcaagatcaa ggactcgctc aaagaggaaa aaagaaaaat agccgacgac ggtaaataca
     2041 tacttcagaa aaaacttgaa ggcgtcggcg ccgcattgaa ccagcacaac attgatga
//
LOCUS       DASQJI010000527         4104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_985726,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000527 DASQJI010000000
VERSION     DASQJI010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4104
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985726"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1181..>4104
                     /locus_tag="VEV83_14340"
     CDS             1181..>4104
                     /locus_tag="VEV83_14340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK46353.1"
                     /translation="MRKYKLLSLLCFIATTAYSQETYPVNGVQDHRQGYLAFTHATIV
                     KDARTTLTEATLIIKEGKIIAVGNNISVPKEAAVIDCKGKYIYPSFIDLFSDYGITAE
                     QQPQRSTDFFRTQMLSNTKGAYGWNQAIRPETDASKIFSVNDDKAKDLRGVGFGVVVS
                     HLQDGIARGTGTLVTLNDEKENLDMLKERAAAFYSFNKGSSTQDYPTSLMGSIALLRQ
                     TYLDAQWYKTRPADEGTNLSLEAWNNNQSLPQIFDAGDKWNVLRAKKIADEFGVQYVL
                     KCGGNEYQRLDEIKATKASFIVPINFPNAVDVEDPNAARLVALSVMKHWEMAPLEPGM
                     FEQAGLNFALTASGTTGSEFLPNLRKAIENGLSNEKALDALTKIPATLLGVYDRLGSI
                     ETGKVADFIITTGPVFDEKTVFLQNWIQGKKFILNETAWKDYRGNYKLTVKQNDQSKQ
                     YDVEVDGKPGKISATIKIQGDTTKTDLQVNINNSTVNLSWSAKADSSKVNSLTGVISQ
                     NVWTGSGYMANGNAVTWNMLFSSAYVEKPDTSKKEPKKNDINRTVVYPFNGYGLPEEP
                     KQHDLLIKNATVWTNETDGILQNTDVLLRNGKIASIGKDLSSSGAEQIDGTGKYLTPG
                     VIDEHSHIAVSGSVNECSQSVTAEVRIADVIDPDDIQIYRQLSGGVTSAHVLHGSCNT
                     IGGQTQLIKLRWGRGPEELKFANWDPFIKCALGENVKRTYNSSNIRYPDTRMGVEQVF
                     VDAFTRAQDYQKQGADKRRDLELDALSEILNHKRFITCHSYVQSEINMLMHVADSFHF
                     RVNTFTHILEGYKVADKMKAHGAYASTFSDWWAYKAEVEDAIPYNAAIMTKVGVIVAV
                     NSDDPEQARHLNQEAAKGIKYGGLTEEQAFKMCTLNPATMLHVADRVGSIKVGKDADV
                     VLWTDNPLSVYARPEKTIVDGIVYYDRQRDSTLRVQIAAERNRLIQKMLAAKKSGAKT
                     TPA"
BASE COUNT         1243 a          867 c          996 g          998 t
ORIGIN      
        1 tgttcttgcc ttgatggctg ccggtgtttc cctcgcagcc ttaaacatgc cggggtttat
       61 tcaaccgata cacttattgc tcgcaagcat tctgtttgtg agtctgtttg ctttccggat
      121 gaatctaagg agctagcccg ccgagaaggt ggcccactaa gcccgcgaag agcaggaaga
      181 gagaagccta atccaaaaca gtaaaacccc gttgtcggct catgagttga tgaaaaatgg
      241 cgtcgatcag ccaaactttc atcagtatta tgctttgtgt tctttgcgcg ctttgtggga
      301 aaagcatgat gccgttattc tgtttagttt cacgatgaag gtaacgagct agccggcgaa
      361 gagtggccca gtgagcacac ggagggcacg gagaaaatct tctaattcaa aaagtcccag
      421 cgcattttga gtcacacgac ttgagaagaa tggcatccat cgacatcttc attaatatcg
      481 ttttaatcga tttaataaac actttttaaa gaatgtaaaa ttgttctttg tggcctttgc
      541 gcgctttgtg ggaaaaaaat gatggagtta ttctgtttgg tttcatgatc aaggtaacga
      601 ctggcccgcg aagaaagtgg cccactgagc acacggaggg cacggagaaa atcttctaat
      661 tcaaaaagtc acggcgcatt ttgagacaca cgacttgaga agaatggcat ccatcgacat
      721 cttcattaat atcgttttaa tcgattaaat aaacactctt taaagaatgt aaaattgttc
      781 tttgtggcct ttgcgcgctt tgtgggaaaa aaatgatgga gttattctgt tggtttcatg
      841 atcaaggtaa cgactggccc gcgaagaaag tggcccactt agcacacgga gggcacggag
      901 aaaatcttct aatccaaaaa gtcccagcgc attttgagac acacgacttg agaagaatgg
      961 catccatcga catcttcatt aatatcgttt taatcgattt aataaacact ctttaagaac
     1021 gtaaaatttt tctttgtgcc ctttgcgggc tttgtgggaa atactctttg gcaaagactc
     1081 cgcggggaaa gccgctgata taattacggt attacagttt tgtaggaatt tgtaaagccc
     1141 ttagatttac cgctttttaa agctgaacca tgtttgcaat atgagaaaat acaaactgct
     1201 ttccctattg tgttttattg ccacaactgc atattcgcag gaaacctacc ccgttaacgg
     1261 agtgcaagac catcggcagg gttacctcgc tttcacacat gcgacgatcg taaaggatgc
     1321 cagaactacg ctgacggaag caacgctcat tattaaagaa gggaagataa ttgcagtcgg
     1381 caataacatc agcgtcccga aagaagctgc cgttatcgac tgcaaaggga aatacatcta
     1441 cccctcattc attgacttgt tcagcgacta tggaataact gctgaacagc aaccgcagcg
     1501 cagtaccgat ttctttcgaa cgcaaatgct tagcaataca aaaggtgcgt atggatggaa
     1561 ccaggcgatc aggccggaga ccgatgcatc aaaaattttc tcggtgaacg atgataaggc
     1621 gaaagatcta cggggagtag gttttggtgt ggttgtttcg cacctccagg acggtatcgc
     1681 acgcgggacc ggaacactgg taacgttgaa cgacgaaaaa gaaaatctcg acatgctcaa
     1741 agaaagagcg gccgcatttt attcgttcaa caagggcagc tcgacgcagg attatcccac
     1801 ttctttgatg ggttcgatcg cattgttgag gcaaacgtat ctagacgcac aatggtacaa
     1861 gacaagaccg gcagatgaag ggaccaacct ttcgcttgaa gcgtggaata ataatcaatc
     1921 actgccgcag atctttgatg cgggtgacaa atggaatgtg cttcgtgcaa aaaagatcgc
     1981 ggatgaattt ggtgttcagt atgtccttaa gtgcggcgga aacgaatatc agcgcctgga
     2041 tgagatcaag gcgacgaaag catctttcat cgttccgatc aattttccaa atgctgtaga
     2101 cgtggaagac ccgaacgcag cgcggttagt tgcattgagt gtgatgaagc actgggaaat
     2161 ggcgccgctt gaacccggca tgtttgagca ggcaggatta aattttgcac tcacggcgag
     2221 cggaactaca ggcagcgaat ttttgccaaa cctccgcaag gctattgaga atggtctgag
     2281 taatgaaaag gcactcgatg cattgacaaa gatccccgca acactgcttg gcgtgtacga
     2341 tagactcggc agtattgaaa caggcaaggt cgccgatttt atcatcacaa cgggaccagt
     2401 gttcgatgag aaaaccgttt tccttcaaaa ctggatccag ggaaaaaagt ttatcctgaa
     2461 tgaaactgca tggaaagatt atcgcggtaa ctacaaactc acggtgaaac aaaatgacca
     2521 aagcaaacaa tatgatgtag aagttgacgg taaaccgggc aagatctcgg ccaccatcaa
     2581 aatacaaggg gatacaacaa aaactgacct gcaggtaaac ataaataaca gcaccgttaa
     2641 tttaagctgg agtgcgaagg ccgacagcag caaagtgaat tcgctcaccg gcgtcattag
     2701 ccagaatgtg tggactggct cagggtacat ggcaaatggc aatgccgtaa catggaacat
     2761 gcttttttcg agtgcatatg ttgaaaaacc tgacacgtcg aaaaaggaac caaaaaagaa
     2821 tgacatcaac agaactgtag tctatccttt caacgggtat ggtcttcctg aagaaccgaa
     2881 gcagcatgat cttttaataa aaaatgcgac ggtctggaca aacgaaacag atggcatttt
     2941 acaaaatact gatgtattac tcaggaacgg aaagatcgcg tcaataggaa aagatctttc
     3001 ttcttcaggc gctgaacaaa tcgacggtac cggaaaatac ctgacccccg gtgttatcga
     3061 cgaacattcg catatcgctg tatccggcag tgtaaatgaa tgttcgcaat ctgtaacggc
     3121 agaagtgcgc atcgccgatg tgatcgatcc tgacgatatt caaatttacc ggcagctttc
     3181 gggcggtgtt accagcgctc atgttctgca tggaagttgc aacacgatag gcggccagac
     3241 tcaactaata aaattgcgct ggggcagagg ccctgaggaa ttgaaattcg ctaactggga
     3301 tccattcata aaatgcgctt tgggcgaaaa tgtgaagcgc acatataatt cgtccaacat
     3361 acgttaccct gacacacgta tgggcgttga acaagtattc gttgatgcat ttacacgggc
     3421 acaggattat caaaaacagg gagccgataa gagaagagac ctcgaactcg atgcactttc
     3481 tgaaattcta aatcataaaa gatttatcac ttgtcattct tatgtgcaga gcgagatcaa
     3541 tatgcttatg catgtcgccg attcatttca tttccgggta aacactttta cgcacatact
     3601 ggaaggatat aaggtggcgg acaaaatgaa ggcgcacggc gcgtatgctt ctacattcag
     3661 cgactggtgg gcatataaag ctgaagtaga agacgcgatt ccttacaatg ccgcgatcat
     3721 gacgaaagtc ggcgttattg tcgcagtgaa cagcgacgac cccgaacagg cgcgccattt
     3781 gaaccaggaa gctgcaaaag gaattaagta cgggggatta acggaagagc aggcgtttaa
     3841 aatgtgcacg ctcaatcctg ctactatgtt gcatgttgcc gacagagtag gaagcataaa
     3901 agttggcaaa gatgctgacg tggttttatg gacggacaat cctttgagcg tatatgcaag
     3961 accagaaaag acaattgttg atggtattgt ttattacgac aggcaacggg attcaacatt
     4021 gcgtgtacag atcgcggcgg agcgaaatcg tcttattcaa aaaatgctcg ctgcaaaaaa
     4081 gagcggtgcc aaaacgacgc cagc
//
LOCUS       DASQJI010000528         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2214433,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000528 DASQJI010000000
VERSION     DASQJI010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214433"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1676
                     /locus_tag="VEV83_14345"
     CDS             <1..>1676
                     /locus_tag="VEV83_14345"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HYK46354.1"
                     /translation="QFNADVKFPELNGKTEVYFDERLVPHVYADNETDAWFVQGYLHA
                     KFRLWQMDFQTYAAGGRLSEIFGDSANGTNFLKIDKFFRRLGMVYAAEKTLHAIDKDP
                     MTKAVCDAYTAGVNAYISSLHEKDYPIEYKLLNYKPEPWTNLKSALFAKYMAYDLAGY
                     EEDFEKTNAKAFLSKQQYEKLFPYINDSLQPIVTEPLPKLTNAIAVKPPSSLDSIYLN
                     YKLTVAPANPPLKPNANNGSNNWAVAGSKTKSGRPILCNDPHLGLNLPSLWYEMQIST
                     PAFDAYGATLPGAPNILIGFNENCAWGLTNSERDVRDYYEVKFRDSSMQEYWYNGEWK
                     KAQSRNEIIRIRGKSSDTEHIAITVWGPVMYDPHYPDKLHTNKYYACRWKAHDESNEL
                     GAVLKLIRAKNYNDYLNAVSGFTCPGQNFVFADKAGDIAIRQQGTFPALWYRQGDFVM
                     PGDDNSYAWQGYVPDSFNVVMHNPERGFVSSANQCPYNPFTYPYYMPGVFNLYRSWLI
                     NRNLSGMHDITTDDMERLQTNVYNLMAEKGRPLFIHYIDSSKLDEKDMKY"
BASE COUNT          511 a          358 c          384 g          423 t
ORIGIN      
        1 aacagtttaa tgctgatgtg aaattccctg aattaaacgg taagacagaa gtttattttg
       61 atgaacgctt agtaccgcat gtttatgccg ataacgaaac ggatgcctgg tttgtgcaag
      121 gatacctgca tgcaaaattc aggttgtggc aaatggattt tcaaacgtat gcggctggcg
      181 gaaggttgag tgaaatattt ggcgactctg cgaatggtac taacttcttg aagatcgata
      241 aattcttcag gcgtttggga atggtatatg ccgcagagaa aacactccat gctattgaca
      301 aggacccgat gacaaaagca gtttgtgatg catatacggc gggcgttaat gcttacatca
      361 gttctctcca cgaaaaagat tacccgatcg agtacaaatt actcaattac aaacccgagc
      421 cctggaccaa cctgaaatcg gcgctgtttg caaagtatat ggcctatgac cttgcaggat
      481 atgaagaaga tttcgagaaa acaaacgcaa aggcatttct ttcaaaacag caatacgaaa
      541 aactttttcc ttacattaat gactctcttc agccgatcgt aactgaacct ctgccaaaac
      601 ttacgaatgc tattgccgtt aaaccgccgt caagccttga ttcaatatat ctcaattata
      661 aactgacagt cgctcccgca aatccgccgt taaagccaaa tgcgaacaac ggaagtaaca
      721 attgggcagt tgcaggtagc aaaaccaaaa gtggcaggcc gatcttatgt aacgatccgc
      781 atctcggctt aaatcttccc tccctttggt atgaaatgca gatatcaaca ccagctttcg
      841 acgcatatgg tgcaacgctg ccgggagcgc ccaacatatt gatcggtttt aacgagaatt
      901 gtgcgtgggg attaacaaac tccgaaagag atgtgcgtga ttattacgaa gtaaaatttc
      961 gcgattcatc catgcaggaa tattggtaca acggagaatg gaagaaagct cagagtcgga
     1021 atgagataat caggatcagg ggcaagtcga gtgacacaga gcatattgct attaccgttt
     1081 ggggcccggt aatgtatgat ccgcattacc cggataaatt acacacgaac aaatattatg
     1141 cgtgtcgctg gaaagcacac gacgaaagca acgagcttgg tgctgttcta aaactgattc
     1201 gcgcgaaaaa ttacaatgac tatctcaatg cagtttcagg ttttacatgc cccgggcaga
     1261 attttgtttt cgcagataaa gctggcgaca tcgcaatccg gcaacaagga acattcccgg
     1321 cattgtggta ccggcaggga gattttgtga tgccaggaga tgataacagt tatgcgtggc
     1381 agggttatgt ccccgatagc tttaatgtgg taatgcacaa tcccgagcgc ggctttgtca
     1441 gcagcgcgaa ccagtgcccg tataatccat ttacctatcc gtattatatg cccggcgtgt
     1501 ttaacttata tcgcagttgg ctcatcaaca gaaatctgtc tggcatgcac gatatcacaa
     1561 cggatgacat ggagcggctt caaacaaatg tatacaacct gatggcagaa aagggacgcc
     1621 ctctgtttat acattacatc gattcttcaa agttggatga aaaagacatg aagtat
//
LOCUS       DASQJI010000529         6805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2982611,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000529 DASQJI010000000
VERSION     DASQJI010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6805
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2982611"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VEV83_14350"
     CDS             complement(<1..821)
                     /locus_tag="VEV83_14350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46355.1"
                     /translation="MNISAKLLLALLTQIFLFTKNLEAQNTFPSSGSAGIGTTTPNAS
                     SALEIKSTTQGLLISRMTKAQRDAIVTPATGLMVYQTNSTPGFYYYSGTAWTAITVKS
                     KGWSLTGNAGTASGANFIGTTDAQPLMFKVNNTKAGFLDFTGNIGFGLQSLSSNTGDY
                     NSAFGYQALYANTTGSSNTANGFQSIYSNTTGYQNTANGRIALFYNTIGYNNTANGFG
                     SLYSNTAGYNNTANGSYALTYNTIGTENTANGAFALNRNTTGVYNTANGSNALYF"
     gene            1050..3032
                     /locus_tag="VEV83_14355"
     CDS             1050..3032
                     /locus_tag="VEV83_14355"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HYK46356.1"
                     /translation="MPVKFYLSSITKVLALFLCNSCFAQTIPDSLTDRLNNAVNDSAR
                     VIALLEIGESVEPVTPARSFYYYQQALALAKKIKNDRCVLSSLHDVGVCYIELNKLDS
                     AIVTFEQAIPFAKQLNDTVRIARLLANIGNVYLHKKDRLTGIDYYLQSARLWETAADQ
                     QWLPVVYANINGLLNDQKEYYKALEYGNKGLALATKLGDDNSIINTLINLSETYNFLG
                     KFEEQYKLLQRALPLAKKRGNIEVIAAVYENLGDYYYQEKQYSLSLDNYQQNHDYVLQ
                     MGNKYALSGSFSMLAEVYNKLGRNDKALEYILQAEKIAGEVGVRADLREIYLTRATIE
                     QQLGHYKLAGEYFSKTLILTDSLFKVETSQKVAEVEARYQNEKKQLEISQLEKDKKIQ
                     ALSIKQKSTLNYFLIASLAALLIVGFLIYRNLYHRQLLAKQQDELQQQRIRELEKDKQ
                     LVVVDSMLKGQEEERKRLAKDLHDGLGGMLTGVKFSLMNMKSNLTVGHDDVVIFERSL
                     DMLDTSIQELRRVAHNMMPEALVKFGLDEALRDYCNNLNTAHIFNVRYQSFGIEERLD
                     HTSEIIIYRIIQELLNNIFKHAKATEVLVQLFREETRLNITVEDNGKGFDISDLEKNK
                     GAGWANIRSRVEYLKGKLDLHSDSSNGTSVNIELNT"
     gene            3034..3651
                     /locus_tag="VEV83_14360"
     CDS             3034..3651
                     /locus_tag="VEV83_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46357.1"
                     /translation="MIRVFIVDDHPMVQEGMRSLLSNEKEIELCGYAMTAQSCLGFFV
                     NNTADVILMDINLPDMSGIDLCAAVKKSYPGIMVLGLSTFNQGSYINKMIENGASGYV
                     LKNADKEELLEAIREVNKGKIYLSFQAAQAMRKETSVEQIPLITRREKEILCLIAEGF
                     TNPEIAEKLFISPSTVDSHRKHLLAKMSMKNTASLIKFAVENKLL"
     gene            complement(4063..6078)
                     /locus_tag="VEV83_14365"
     CDS             complement(4063..6078)
                     /locus_tag="VEV83_14365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46358.1"
                     /translation="MRKAFITILILLYLHNAYTQTTQQYDSLKNLIRSSKDDSTTFYR
                     TVDLIWAYIPSNSDSATLYVQQNILLAQKMKSDAALFMGYAQYAALEQINGNYSGALQ
                     YGLRGLRAAEHTNNFISISEEYFILADIYREAGDYAQAIYNLRKAKHLLESKLNPVFE
                     HENPETASRYVNCLVLAAQIFETFNQLDSALQYANNAHDLSLKGLGKWGTSEDTLYFS
                     LKLDPIIGNIYSKNGDYYTAITYYRAGAAIASGNTNLIDNYNGEASIFKKRGQLDSSI
                     FYANKVLELSKAAHYLMGKLQALNLLSDVYTLEHNTDSVAKYLELTIETKDSLFNTKK
                     VMEIQSISFNEQLRQQEIKDQQEKYQNRLRIYLLAGGLLVFLLVAAILYRNNRHKQKA
                     KVKIEKAYEELKSTQAQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNKELLIE
                     LKDEIKKGNTDEASAIANDVIENEEKINHHGKRADAIVKGMLQHSRTSTGQKEPTDIN
                     ALCDEYLRLSYHGMRAKEKEFNATLKTDFDNTIGKMDIVPQDIGRVLLNLINNAFYAT
                     NEKLNHYSSQLAAGYKPLISVQTRKINNKVEIRVSDNGNGIPEKVSDKIFQPFFTTKP
                     TGEGTGLGLSVAYDIIKAHAGEIKVLTKEGERIEFIITLPLKMTQAI"
BASE COUNT         2053 a         1261 c         1383 g         2108 t
ORIGIN      
        1 ttgaagtaaa gcgcattact gccattggca gtgttataaa cccccgtggt atttctattg
       61 agagcaaaag ccccgtttgc tgtgttctca gttccgatgg tgttataagt aagcgcataa
      121 cttccattgg cggtgttgtt atacccggca gtattagaat aaagagatcc aaatccatta
      181 gctgtgttgt tatatcctat agtgttataa aaaagggcga tcctaccgtt cgcagtattc
      241 tgataaccgg tggtgtttga ataaatagat tgaaacccat ttgccgtatt tgagcttcct
      301 gtggtgttgg cataaagggc ttgatatcca aaagcgctgt tataatctcc ggtattggaa
      361 cttaagcttt gaagcccaaa accaatgttg cctgtaaaat caagaaagcc tgccttagta
      421 ttatttacct tgaacatcaa tggttgcgca tcagtagtac cgatgaaatt tgcaccggat
      481 gctgtgccgg catttccggt aagcgaccac cctttgcttt ttactgttat ggctgtccat
      541 gctgtgccgc tgtaataata aaaccccgga gtgctgttgg tttgatagac cattaaccct
      601 gtagccggtg ttacaattgc atcacgttgt gcttttgtca ttcgtgatat aagcaatccc
      661 tgtgtggttg atttaatttc tagtgcggat gaagcattag gggtagtagt gccgatgcct
      721 gcacttccac tggatggaaa ggtattttgc gcctcaagat tcttggtgaa aagaaagatt
      781 tgcgttaata atgccagcag aagttttgca gagatgttca tgataacatt tttcagtata
      841 agaaattaca tttgatttct cgttctcatt tctaagaaag taactcgaga tacagcgcaa
      901 aagtagacct gcacttatgt gttacctatc ccccaaaaca gtgatttatg ctatagattt
      961 taaaatcccc tgaaaagggg aattttagaa agatgcttga atattcgaat tagaaaggca
     1021 acctttggaa atattcatta gccagtttta tgccggtgaa attttatctt tcctcaatta
     1081 caaaagtttt agcactgttt ttatgcaaca gttgttttgc gcaaaccatt ccggatagct
     1141 taacagatag attgaacaac gcggtaaatg attcggctag agtaatagcc ctgcttgaaa
     1201 ttggcgaatc ggtggaaccg gttacacctg cccgcagctt ttattattac cagcaggcat
     1261 tggctcttgc aaaaaaaata aaaaatgacc ggtgtgtatt atcctcatta catgatgtgg
     1321 gtgtttgtta catcgaattg aataaactgg atagcgcgat tgttacgttt gagcaggcta
     1381 ttccttttgc taaacaacta aatgatacag taagaatagc gagactacta gctaatatcg
     1441 gaaatgtata cctgcacaaa aaagatcgtc ttacgggcat tgattattac ctgcaatcag
     1501 cgcgcttatg ggaaactgct gccgaccagc aatggttgcc tgttgtctat gcaaatatca
     1561 atggcttatt aaacgaccaa aaagaatatt ataaagcgct tgaatatgga aataagggac
     1621 tggcacttgc caccaaactt ggggatgaca attcaattat aaacactttg ataaatctgt
     1681 ctgaaactta taatttcctg ggcaagtttg aagaacaata taaattatta caaagggcat
     1741 tgcccttagc aaaaaaaaga ggaaatatcg aagtgattgc ggctgtatat gagaatctcg
     1801 gcgattatta ctaccaggaa aaacagtatt ccctttcttt agataattat cagcaaaatc
     1861 atgactacgt attgcagatg ggaaataaat atgcattgag cggttctttc tctatgcttg
     1921 cggaagtata taacaagctg ggtcgaaatg ataaagcact cgaatatatt ttgcaggcag
     1981 aaaaaattgc aggggaagtg ggtgtaaggg cagacctgag agaaatttat ttaacgagag
     2041 ctactattga acagcagttg ggtcattata aactggctgg cgaatatttt tcaaaaacac
     2101 taatcctcac cgactcgtta ttcaaagtag aaaccagcca aaaggttgct gaggtggagg
     2161 caagatatca gaatgaaaaa aaacaactcg aaatttcgca actggaaaaa gataagaaaa
     2221 tacaggcgct ttctataaaa caaaaatcca cgcttaatta ttttttaatc gcctcgctgg
     2281 cggcattgct gatagtcggt tttttaattt atcgaaatct ttatcacagg cagttgttgg
     2341 caaagcagca ggacgaattg caacaacagc gcatacgtga gttagaaaaa gataaacaat
     2401 tggtggtagt tgattccatg ctgaaagggc aggaggagga aagaaaacgg ctggcgaaag
     2461 accttcatga tggattaggc ggcatgctaa ccggagtaaa attttcgctg atgaatatga
     2521 aaagcaatct tacagtaggt catgatgacg tggtgatttt tgagcgctcg cttgatatgc
     2581 tcgatacctc tatccaggag ctgcgccggg tggcacataa catgatgcca gaggctttgg
     2641 tgaaattcgg attagacgaa gcgctgagag actattgcaa caatctcaat accgcacata
     2701 tttttaatgt ccggtaccag tcatttggaa tcgaagagag actggatcac acttctgaaa
     2761 ttattattta ccgcatcatc caggagttat taaataatat ttttaaacat gcaaaagcca
     2821 cagaagtgct tgtgcaattg tttcgtgaag aaacccgcct gaacataacg gtagaagata
     2881 acggtaaagg tttcgacatt agtgatcttg aaaaaaataa aggtgctggt tgggcaaaca
     2941 tccgcagccg cgtagagtac cttaaaggaa aattagacct tcattcagat agctcgaacg
     3001 gaacctctgt aaatattgag ttaaacacat aatatgatcc gtgtttttat tgttgatgat
     3061 catcccatgg tgcaggaagg catgcgttca ttgctaagca atgaaaaaga aattgaatta
     3121 tgcggatatg caatgacggc acaatcatgc ctcgggtttt ttgtaaacaa cactgccgac
     3181 gtaatattga tggatataaa tttgcccgac atgagtggca tcgatctttg cgcggcggtc
     3241 aaaaaaagtt atcccggaat tatggtactt ggattaagca ctttcaacca gggcagttat
     3301 ataaataaaa tgatagagaa cggtgcaagc ggttatgttc taaaaaacgc tgataaagaa
     3361 gaattgctcg aagcgatccg ggaagttaac aagggtaaaa tctacctgag cttccaggca
     3421 gctcaagcta tgcgcaaaga aacttccgtc gaacaaattc ccttaataac ccgtagagaa
     3481 aaagagatat tgtgtctgat tgctgaagga tttactaacc ctgaaattgc agaaaaattg
     3541 tttattagtc cttccactgt tgacagccat cgaaagcacc ttttggctaa gatgagcatg
     3601 aagaatacag cttcgctgat aaagtttgca gtggaaaata agttgcttta ataaccctgc
     3661 ctggtatagc ttactgtcta tttccataag ttgcttttca caatttattg tggtggctaa
     3721 gcttcctggt tgcatttctt atcatactgt agaggctgtt ccgtcaggca ctgcaaatag
     3781 ggatgttagc tgtggtgcta ttgtcaatca aatgaagtac cagaaccacc gcctaaccat
     3841 ttttttatag tcagtaaatc cgtgtccgaa ttcaagttcc aaataatttt cttcccgttt
     3901 gattatgtat tcttaaagta taattaaaag cactggtaaa agaataatat tccatcaatt
     3961 tccaatgaag caagtaatgg gtaaatgttg atgaagtgct gagtaatcat gaggatgagc
     4021 ttggatatgt catatttgga gaagctcaat cttacaggca cttcaaattg cttgtgtcat
     4081 tttaagggga agcgttatta taaactcaat tcgctcacct tccttcgtca gcacttttat
     4141 ttctcccgca tgggctttaa ttatatcata agcgacgctc aaacccaggc ctgtgccttc
     4201 accggttggt tttgtagtaa aaaatggctg aaagatttta tctgatactt tttcaggaat
     4261 accgttgcca ttatcgctta ctcttatttc aaccttatta tttatttttc ttgtttgcac
     4321 tgaaatgagt ggcttgtaac ctgctgcgag ctgtgagctg taatgattga gcttttcatt
     4381 tgttgcataa aacgcattat tgataaggtt tagcagcact cttccaatgt cttgtggaac
     4441 gatatccatt tttccaatag tgttatcaaa atctgttttc aatgttgcat tgaattcttt
     4501 ttcttttgcg cgcatgccgt gataactcaa tcgcaaatat tcatcgcata aagcatttat
     4561 atctgtgggt tctttttggc ctgtgcttgt acggctgtgt tgcagcatgc cttttacaat
     4621 ggcatccgct cgcttcccgt ggtgattgat tttttcttcg ttttctataa catcatttgc
     4681 gatcgcactt gcttcatccg tatttccttt tttgatttca tcttttaatt caatgagtaa
     4741 ctctttattc acttcactaa aattatttac gaagtttaaa gggttctgta tctcgtgagc
     4801 aatacctgca gtaagttcac caagcgaagc catcttttct gattggataa gttgtgcctg
     4861 ggtggatttc aattcttcat aggctttttc aatttttact ttcgcctttt gtttgtgccg
     4921 gttattgcga tacagaattg ctgccacgag taaaaagaca agcaatcctc cggcgagcaa
     4981 atatattcgt aaacgatttt gatatttctc ctgttgatct tttatctctt gttgcctgag
     5041 ttgttcgttg aaggaaatgc tttgtatctc cataaccttc tttgtattga acaggctgtc
     5101 ttttgtttca atagtcagtt ctaaatattt ggcaacactg tctgtattgt gttctagtgt
     5161 atatacatca gacaataagt taagcgcctg aagtttgccc atgaggtaat gcgcagcttt
     5221 actcagttcc aaaactttat ttgcatagaa aatgctcgaa tctaattgtc cccttttttt
     5281 aaaaatgctt gcttcgccat tataattatc aatgagattt gtgttaccgc tggcaatcgc
     5341 tgcgccagct ctgtaataag taatcgcagt ataataatca ccgttttttg aataaatatt
     5401 acctattata gggtcgagct taagggaaaa gtaaagcgta tcttctgaag ttccccattt
     5461 gccgagccct tttaaagata aatcatgagc attatttgca tattgtagtg cagaatcgag
     5521 ctgattgaac gtttcaaaaa tttgtgctgc aagcacaaga cagttaacat agcgggaagc
     5581 ggtttcaggg ttctcatgtt caaaaaccgg gtttaatttt gattcaagaa ggtgttttgc
     5641 tttacgcaaa ttataaattg cctgtgcata atctcccgct tcacggtaaa tatcagccaa
     5701 aataaaatat tcttcagaaa tcgaaatgaa attgtttgta tgctcggctg ctctcaaacc
     5761 ccgaagacca tattgaagtg cgccgctgta attgccatta atttgctcaa gagctgcata
     5821 ctgagcatac cccatgaata atgcggcatc tgatttcatt ttttgtgcca gcagaatgtt
     5881 ttgttgtaca tataaagttg cagaatccga atttgaaggt atgtaagccc aaatcagatc
     5941 tacagtcctg taaaatgtag tcgaatcatc ttttgaagac ctgatcaaat tcttcaaact
     6001 atcatactgc tgcgtggttt gagtatatgc attatgcaaa tacagcagaa ttagaattgt
     6061 tataaaggct tttctcatta acagcgtttt gcatcggaaa ggcaaatatt atataggtaa
     6121 ttgaatgata aattcacttc cttcatcctc tttcgtttgc actttatctc tcgagctgtg
     6181 tgcttgaata acatcataac tcaacctcaa tccgaatcct gttcaatcag tgttggcgag
     6241 cttagtggag cgttaaagcg gcaattcaat taatgaatac tacacccttc gggataaagc
     6301 cagtatgtta aagctatgga taattcccag aaggtaatta tattaaactg atgatagtta
     6361 cgaaaattaa agcattggca acttggcaaa gatcgtaaga caccttcaag gcattctgaa
     6421 acaaagacct ttgggaaatt gcctaaattc aaaatcagag gttaccgact taccaaactt
     6481 gtcgagcatg cgccttttaa gcaagaacgg tatcttcaat taaattgaag actgccacgg
     6541 gagacacgtt tcgtttcgtc gtcgctcaga tcccaaaaag aaactagcaa agaaaaaatt
     6601 tgaggtcttc cgaattgtag caagtgaagc ggtagaaaat aaatatctaa cgtagagatg
     6661 gttcactttg caaatatgtt taatccctat cttctttttt tttcttatag aaggaacgtt
     6721 gcgccacatt tgtgtctcga aacccataac acttgaaaaa tgaacactcg ccaagttatc
     6781 aacttacatc agaatagaag cgagg
//
LOCUS       DASQJI010000530         1940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1291827,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000530 DASQJI010000000
VERSION     DASQJI010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291827"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VEV83_14370"
     CDS             complement(<1..609)
                     /locus_tag="VEV83_14370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46359.1"
                     /translation="MATTDKINIGSWNTFHENGPWPTKVLYNTALEPKQNMPEMLDRY
                     NDAAAEIQRLLKSALDNQEGFRAYGSAWSMSTIAHQKDNMHFNSQMNLKKAIDADEME
                     PGSRYLSENLFLFECGNIVKEISVFLFRNGKSLKATGASNGQTIAGCISTGVHGSAFD
                     FGAFQDAVVGINLIIGDTVDDIVYVERDSKPALNNVFASRIHA"
     gene            complement(612..959)
                     /locus_tag="VEV83_14375"
     CDS             complement(612..959)
                     /locus_tag="VEV83_14375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46360.1"
                     /translation="MKRHAAKPKAWLVVVIVVLFSSCYSVRIVNKDAVPEPDPLNTST
                     DFYRGKKVHVLDTVITLKPQEGEFTLIERCVSDGFYSLEYRVTFGGVLLNTITFGRKR
                     QVKIKYVCLKQSD"
     gene            complement(1179..1748)
                     /locus_tag="VEV83_14380"
     CDS             complement(1179..1748)
                     /locus_tag="VEV83_14380"
                     /inference="COORDINATES: protein motif:HMM:NF025825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HYK46361.1"
                     /translation="MTKEEIKEFANFINYRCQFTSAELKTLHTILREGEECFGIVEGM
                     MKKVHHNKHSGYGIGVLTDKRFLFYHKSLLGGTTMEEFPIATISSITVSKGSVLGSLH
                     VYASNVDEIIIEPCDNNNAARLVKAWQILLDERNLVNAGLAEEAQLNSSSETISDPTS
                     ELEKWHSLKERGIISEEEYDLKKKQILNL"
BASE COUNT          531 a          443 c          394 g          572 t
ORIGIN      
        1 ggcatggatc cgacttgcaa aaacattatt cagtgcgggt ttgctatcgc gttcgacata
       61 aacaatatcg tcaacggtat ctccgatgat caggtttatc ccaacaactg cgtcctggaa
      121 ggcgccaaaa tcaaatgcag acccatgcac tcctgttgaa atacaacctg caatcgtttg
      181 accgttgctg gcgccggttg ctttcaacga ttttccgttt ctaaaaagaa atacgctgat
      241 ctcttttaca atattcccgc attcaaacaa aaacaagttc tcactcaaat atcgtgagcc
      301 gggctccatc tcgtcagcat cgatcgcttt cttcaaattc atttgcgaat tgaaatgcat
      361 attgtctttt tggtgtgcga tggtcgacat cgaccatgcg gatccatatg ctctgaatcc
      421 ttcctggtta tccaaagccg atttaagcaa tcgctgtatc tctgctgctg catcattgta
      481 acgatccagc atttccggca tgttttgctt tggttcaaga gctgtattat aaagcacctt
      541 cgtcggccag ggtccatttt catgaaatgt gttccagctt ccgatgttaa ttttgtcggt
      601 agtagccata attaatcaga ttgtttcaga catacatatt ttattttcac ctggcgtttt
      661 ctgccaaagg tgatcgtgtt cagcaatacg ccgccgaacg ttacccggta ttccagggag
      721 tagaaaccgt cagacacaca cctctcgatg agagtgaatt ctccctcctg tggctttaat
      781 gtgatgacag tatctaacac gtgtactttc ttgcccctgt aaaaatcagt gctcgtgttg
      841 agcggatccg gttcgggaac ggcatctttg tttacaatgc gcacggagta acaagatgag
      901 aacaagacca cgatcacaac aaccagccac gcttttggtt tggcagcatg tcttttcata
      961 attggtttgg tttatagtaa ctggccatct attgccttca ataaatatag cgacaacaaa
     1021 aattttcagt gcggggtacg aagaaaatgc aggactacgc cgggacaatg aaagttaaac
     1081 aaaaaatgta aaaacaaaaa tatttgcaaa caatttcgcg atggatgagt gtgaaaagcg
     1141 attggttttt gcgagtcatg ttgtttaatc aaataagttc aaaggtttaa tatttgtttc
     1201 ttcttgagat cgtattcctc ttccgaaatg atccctcttt ctttcaaact atgccatttt
     1261 tcaagttctg aagttggatc tgaaattgtt tcgctggaag aattcaactg cgcttcctct
     1321 gccagcccag cgttaaccag atttctttca tccagcagga tttgccacgc cttcacaagc
     1381 cgggccgcat tgttattatc acatggctca ataatgatct catccacatt tgatgcataa
     1441 acgtgaagtg aacccagcac cgaaccttta ctcactgtga tagatgagat cgtagcgatc
     1501 ggaaattcct ccatggttgt tccgccaagc aggcttttgt gataaaacag gaatcgctta
     1561 tcggtgagaa ccccgatccc ataccccgaa tgtttgttgt gatggacttt tttcatcatg
     1621 ccttcaacta ttccaaaaca ttcctcgcct tcgcgcagga tcgtgtgcaa agttttaagc
     1681 tctgctgagg taaactggca acggtaattg atgaagttcg caaactcttt gatctcttct
     1741 ttggtcatac cgcgcggttt tggatgacaa acttattact aaaaaagcga cctaagatta
     1801 ccgcatctat tctttcgccg tacggttgtg cacaaaacag cgtatgttcg ataattttgc
     1861 aaaaatcgca ggagcaaatg catggcaaga ggaagaagat catcgcacta caaggtccct
     1921 gaaccaactc tgaaggaaaa
//
LOCUS       DASQJI010000531         9270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2214856,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000531 DASQJI010000000
VERSION     DASQJI010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9270
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214856"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VEV83_14385"
     CDS             complement(<1..1243)
                     /locus_tag="VEV83_14385"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK46362.1"
                     /translation="MKKNRTLIATFAALLLIVSSCKKEFDQNRDQQSDAATSNLAGGK
                     PNIILLIGDDIGREIPHYNGGSYSTPNLDFMAANGTQFPYFFSHPDGPPSRLALVTGK
                     YCYRNWVHFGYLPQTSLTFANMLHDGGYSTCFVGKWQFDGGDTSIHQHGFDKYIVFMP
                     FNPIVNHGHDQYYRRYKNPYLYRDGRWLTSLEVKGKYSEDMFYYYASKFIDSNKTKPF
                     LLVYSHNLAQKPWVPTPDDPLFATWDPSVDDEGRDSVIYFPEMVEYMDKTIGKIITKV
                     QTSGLANNTYIFYLSDNATNTAIRSMYGGQLIRGSKDSTTFNGINVPMLVYAPGRVPA
                     GSVDTSLVDMTDFFPTFADISGLSKTLYKPLDGATFYDNLIGAPTDQRKNVYCYWPRD
                     YQQKINLSYVTDYNYKLYDSLN"
     gene            1390..2193
                     /locus_tag="VEV83_14390"
     CDS             1390..2193
                     /locus_tag="VEV83_14390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK46363.1"
                     /translation="MKNRSAYIIALIFIVASSACVSKKKLIDAQMQARSLQNDSALMA
                     SKMADQQAQINKLQSDLNALTQQNAQLSNEATNKQGQVTSLEQNLAVQQKRLQDLQHL
                     LDQQRKAMEDLKTKMTNALTGFSSSDLTITQKNGKVYVSLSEKFLFPSGSAVVNDSGK
                     IALGKLAAVLIANPDIAVNIEGHTDSIPIRGKFQDNWALSTARASSVVRILVDQYKVD
                     PKRVIASGHAWFDPVDTNSTPEGRARNRRTEIILSPNLDEIYKLLEQTK"
     gene            complement(2338..4143)
                     /locus_tag="VEV83_14395"
     CDS             complement(2338..4143)
                     /locus_tag="VEV83_14395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HYK46364.1"
                     /translation="MEAKRLFDCIDHQLQHFPKADMLSAKVNGQWRSYSTKEVKEITD
                     DFAAGLIELGVSGHDMTDEGRDKIAIISNNRPEWMFTDLAVQQSGAVLVPVYPTTSAN
                     ELQFILNDALVKYVFVSSKDLFVKVQSIKLAVPSLKKIFSFDETEGADHWSIVPALAT
                     EGSRAKFSEVKNSILPEHLATIIYTSGTTGTPKGVMLTHTNIYSNAMFSKESFPFIDA
                     PASKVLSFLPLNHIFEKCVTYIYLFSGNGIYYAESFETIGAHLRELKPDGFTTVPRLL
                     EKVFERIMSAGAELKGIKRKLFFWSVALAQQYATPAAEKISYKLKLNIASKLVFSKWR
                     EALGGNIKFIITGGAACQEKLLRIFNAAGIPVYEGYGPTENSPVISVNRWNDPAGSMI
                     GTVGPVINGLEVKLAEDGEICVKGPTVMRGYYKRPDLTAETIIDGWLHTGDIGVWVHN
                     PKNPALRLLKITDRKKEMFKTSGGKYVAPQAIENVLKGSPFIEQIMIVGADKKFVSAL
                     IVPSFTQLRSWMQLQNIPFTSNEDAVKDPAVIRKYRSVIDQLNQQFNHVEQVKKFELL
                     PTEWGIETGEMTPKMSLKRKVILEKYKETIEEIYN"
     gene            complement(4240..5427)
                     /locus_tag="VEV83_14400"
     CDS             complement(4240..5427)
                     /locus_tag="VEV83_14400"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK46365.1"
                     /translation="MLNALLRKLIRTASGRSRNTMAVTGLFIALLLILAAVQIQSNYQ
                     ELLYNKTSQDSIADFLVINKIVTDKNVGDATLTAPEIDDLRKQPFVEKIGALTPSRFR
                     VGVQSVSRQIPFYTDFFFESVPDEFLDVNTPDWQWNENSTFIPMIIPNMFLDMYNFGF
                     AQSQHLPQLSQDLVKNLPVQIDIEGPTGMVHYYGRVVGFSDRISSVLVPQPFMDWANQ
                     KFGTGVSAKPSRVIIQTKDAGDPQLSSYLRAHGLSTNAEKTRFEKYRGIINAVVVISW
                     ITGGLMFLFALLIFTLFIQLTIASAKDEIVLLITLGAAPNQLQRFLMKQFFPSNIITV
                     IIALVITTASQYALQKFLLSQNIFVSPTLSVYTLVAAGLVLLLLSWVNNRSIRKYIRY
                     NTF"
     gene            complement(5441..6088)
                     /locus_tag="VEV83_14405"
     CDS             complement(5441..6088)
                     /locus_tag="VEV83_14405"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK46366.1"
                     /translation="MQLELQNIIPIPLKDRLLQRNSAVWNQALHFGQSEFIKIKAPSG
                     TGKTTLVHIIYRLRNDFEGTVLWDGQHLKAIKADQLAAMRQKNISIIFQDLRLFQNLT
                     AQENIELKRVLQKPFYEKNKIDEMADQLGIHSVLNQRASTCSYGEQQRIAIVRALMQP
                     FDWIIMDEPFSHLDKNNIDKASALIENECRKRNAGFILTDLEDDNHFHYTKVLNL"
     gene            complement(6166..7833)
                     /locus_tag="VEV83_14410"
     CDS             complement(6166..7833)
                     /locus_tag="VEV83_14410"
                     /inference="COORDINATES: protein motif:HMM:NF027446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4836 family protein"
                     /protein_id="HYK46367.1"
                     /translation="MKHRFLSAVVITMFVFGCKKPVSPLAEFIPKDAAAIFMVDVNGI
                     KEKINSSGITIDSLVDLLSDEETEMPIRWSEITNSGIDLKVPFFIFSDQNNSIQNGNT
                     ANFGLVAQIENEGKLVDFLKKHNQGAEVKQDSKYQYMDLKNGYVAGWKNNILIISGST
                     HAGAGSDEARSHQQLTTLFTQNESASIASVGEFRDMMKKTGDIHFWINASPNLASFGM
                     LGMTKMSSLLQGTYTEGTITFEKGKAKASAETHYNKTLSDILSKYPSREIDKTLISRY
                     PGQVNGFGVVAFNPKVLIDILQYLGFDTMADGYLSEAGFTTTDVVNAFKGDIGVIFSD
                     FRIEEGTIPTMPGINAKRPAAQFLLNAVIGDRAAFNRVMNGLVKQRVLTKNGDQYQLG
                     IFGGHDFVIEATPDNLFIASDDALIKAYESSNNKSALSADVEKEINGKSTAMYVDIEK
                     LLDTSRQVTVHNSYAFSDSGKTWQAAKSTFKNFIGYTEKGDGKTTTSAFELNTVNQNE
                     NSLASLVKFIAVAHHDWQHRTNVGIHPPLDEDSIQRMPDIPQPKSSD"
     gene            complement(7845..>9270)
                     /locus_tag="VEV83_14415"
     CDS             complement(7845..>9270)
                     /locus_tag="VEV83_14415"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK46368.1"
                     /translation="NFCDAKDLVACYEDDPVFQQEAFNWLNGDFVAHGKLPVTVCDAF
                     HYGDGIDNYGLLELQQTSPSDVYVDSTGLLTIDTIANTAIYLHAFPGCVVLVAKDNKI
                     IWSKTYGYFMYNRQQPVTLNTVYDLASVTKVSATTLAIMKLYEEGKLDIFKTIGDYLP
                     WARHSNKSNLVLKDVLLHQAGLVAFIPFYQETIDPATGVARESIYRPFPDSAHMIHVA
                     ANMYMRNDWVDTMFERIVQSKVSGKQYVYSDNDFIFLGKIVEQITGMSLDNYVEETFY
                     KPMYLYNTTFKPNEHISLNTIAPTEHEHQFRMQLLTGYVHDPGSAMFGGVAGHAGLFS
                     NVHDLAVLYTMLLNGGEWNGHRYLKKETIDYFTAYHSDISRRGFGFDKPEKDNATREE
                     PYPALSASPETFGHTGYTGTCVWADPRYHLLFVFLSNRVNPDGGENTKISTLKVRQRM
                     LEAVYDSMDAVRLSRIIQYLRFLP"
BASE COUNT         2469 a         2096 c         2013 g         2692 t
ORIGIN      
        1 cgttcaggct gtcatagagc ttatagttgt aatcagtcac gtagctgaga ttgatctttt
       61 gttgatagtc gcgcggccag tagcaataga cattttttct ttggtccgtc ggcgcaccaa
      121 tcaggttatc gtagaaggta gctccatcca acggcttata gagcgtcttg ctaaggcccg
      181 agatatctgc gaatgttgga aagaaatcag tcatatctac gagcgacgtg tcaaccgaac
      241 cggctggcac cctgcccggt gcatacacaa gcatcggcac attgatgcca ttaaatgttg
      301 tgctgtcttt cgagccgcgg atgagctggc cgccatacat cgaacggatg gccgtattgg
      361 ttgcattatc gctcaaataa aagatgtatg tgttgttggc gaggcccgaa gtttgcactt
      421 tcgtgatgat cttgccgatc gtcttgtcca tatattcaac catctcagga aaatagatca
      481 cgctgtcgcg gccttcatcg tcaaccgaag ggtcccatgt ggcgaacaaa gggtcatcag
      541 gcgttggcac ccacggtttc tgcgcaagat tatgcgaata caccaataaa aaaggtttcg
      601 ttttattact gtctatgaac ttgcttgcat aataataaaa catgtcttca gaatactttc
      661 cttttacttc cagcgatgtc agccaacggc cgtcccggta caggtaggga tttttataac
      721 gccgataata ttgatcgtgc ccgtgattga caattggatt aaagggcatg aaaacaatat
      781 acttatcaaa gccgtgttga tggatcgatg tatcaccgcc atcgaactgc catttcccta
      841 caaaacaagt agaatagcct ccatcatgca gcatatttgc gaacgttaag gaagtctgcg
      901 gcaggtaacc aaaatggacc cagttacgat aacaatattt gccggttacc agtgcaagcc
      961 gggatggtgg gccatccgga tgagagaaga agtaaggaaa ctgcgttcca ttcgctgcca
     1021 tgaaatcaag gttcggggtg ctataagaac cgccgttata atgagggatc tcccggccga
     1081 tatcgtcgcc gatcaataat ataatgttag gtttccctcc agcaaggttt gaggtagcag
     1141 catcgctttg ctggtctctg ttttgatcaa actctttttt gcaggatgaa acgattaata
     1201 gaagtgcagc aaaagttgcg atgagggtcc ggttcttttt cataacgcta tattttggaa
     1261 gttgtaaagt taacatttcg atcaatattt gtctttcagg ctctttcggc cggccgtgtg
     1321 gcagccgttt ctttctttac gtcgaatatt atatattggc acaattttta attcatggta
     1381 acaaactata tgaaaaatag gtcagcatac attatagcac tcatattcat cgttgcatcg
     1441 tctgcttgcg tttcaaagaa aaaattgata gatgcacaga tgcaggcgag atctctgcaa
     1501 aatgacagcg cactaatggc gtcaaaaatg gcagaccaac aagcgcagat caataaactg
     1561 cagtccgatc tgaatgcact cacgcaacaa aacgcacaac tgagtaacga agcgaccaat
     1621 aagcagggac aagtgacttc ccttgaacaa aacctggcgg tgcagcaaaa gcgtttacag
     1681 gatctgcagc atcttcttga tcagcagcgg aaggcaatgg aggatctgaa aacgaaaatg
     1741 acgaatgctc tcaccggctt cagcagcagc gatcttacca taacgcaaaa aaatgggaag
     1801 gtgtatgtta gcctgagtga gaaattttta ttcccctcag gaagtgcagt ggtaaatgac
     1861 tcaggaaaaa ttgcattggg aaaattggcg gccgtactca ttgcaaatcc tgacattgct
     1921 gtaaatattg aagggcacac cgattcaatt ccgatccgcg gtaagttcca ggacaactgg
     1981 gcgcttagta ccgcgcgtgc aagcagcgtt gtgcggatcc tcgtggatca atacaaagta
     2041 gatccaaagc gcgtgatcgc gtccggtcat gcctggttcg acccggtgga tacaaactcg
     2101 actcctgaag gacgtgcaag aaatcgcagg acggaaataa ttctgtctcc taatctcgat
     2161 gagatatata agttacttga gcagacgaaa taaagattcg acgcaacgct attcttcgtg
     2221 tattctagtg gcttcgcgtc ctcgtggttc aaaaaacaga aaccacaaag acaccagggt
     2281 agcgagattc acaaagtttg aacttgatgg aatgtttaat ttttaatagc ccaacactta
     2341 attataaatt tcctcaatag tctctttata tttctccagg atcactttac gtttgagact
     2401 catcttcggc gtcatttcac ccgtttcgat tccccactcc gttggcaaca gctcaaattt
     2461 tttcacctgc tccacatgat tgaattgttg attgagctgg tcaattaccg accggtactt
     2521 ccttatcacg gccggatctt tcacagcatc ttcattactg gtaaatggga tgttttgcaa
     2581 ttgcatccat gatcgtaatt gagtaaatga aggaacgatc aaggcgctta caaatttttt
     2641 gtcggcaccc acgatcatga tctgttcaat gaacgggctc cccttcaaga cattttcgat
     2701 cgcctgtggg gcgacatatt ttccaccgct tgttttaaac atttcttttt tgcggtccgt
     2761 gatctttaaa agcctgagtg ctggattttt tggattatgc acccacacac caatgtcgcc
     2821 ggtgtgcaac catccatcga ttattgtttc cgccgtgaga tccggtcgtt tgtaatagcc
     2881 tctcattacc gttggaccct ttacacatat ttcgccgtct tctgcaagct ttacttccaa
     2941 cccgtttatt accggaccga cagttcctat catgctaccg gccggatcat tccagcggtt
     3001 aacactgatc acggggctgt tttccgttgg gccgtagcct tcatacaccg ggatcccggc
     3061 cgcattaaaa atgcgtagca atttttcctg gcaggctgca ccgcctgtaa ttatgaattt
     3121 tatatttcct ccaagcgctt cccgccattt gctaaaaact aatttgctcg cgatgttcag
     3181 ctttagttta taagagattt tttctgcggc cggtgtagcg tattgttgcg cgagagctac
     3241 gctccagaaa aacaattttc tttttattcc tttcagttcc gctcctgcgc tcataatgcg
     3301 ctcgaaaacc ttttccagca gtcgcggcac ggttgtaaat ccatctggtt ttagttctct
     3361 aagatgagcg ccgatcgttt cgaaactctc agcataataa atgccattgc cgctaaaaag
     3421 atagatgtag gtgacgcatt tttcaaaaat gtgattcagt ggaaggaagc ttagcacttt
     3481 ggatgccggc gcatcgataa agggaaaact ttctttcgaa aacatcgcat tgctgtaaat
     3541 gttagtatgt gttagcatca caccctttgg tgttccggta gtacctgacg tataaataat
     3601 ggtggcaagg tgctccggca aaatggagtt tttcacctca ctgaatttcg ccctggatcc
     3661 ttcagttgcc aatgccggta caatactcca atgatcggct ccttctgttt catcaaatga
     3721 aaagatcttt tttaaggacg gtactgcgag tttgatgctc tgtactttca caaacagatc
     3781 tttactgctt acaaaaacat attttaccag cgcatcattt agaatgaatt gcagttcgtt
     3841 cgcacttgta gttggatata ccgggacgag taccgctcct gattgttgaa cagccaggtc
     3901 agtgaacatc cactcagggc ggttgttgct tatgatcgcg atcttgtccc tgccttcatc
     3961 ggtcatgtcg tgaccgctca cgccgagttc gatcaaccct gcggcgaaat cgtccgttat
     4021 ctcttttacc tcctttgtgc tgtatgatct ccattgtcca ttcactttag cgcttaacat
     4081 gtcggctttc ggaaaatgct gcagttgatg gtctatgcaa tcaaaaagac gttttgcttc
     4141 cattctgtat tcaatcgttg agaattaaaa atacaatttt tgctaaggag atacgctttg
     4201 gaacatttag ataaagtttt ttgaatgtat tcaaacgatc taaaaggtat tgtaccgaat
     4261 atattttctt attgaacggt tatttaccca gctgagtaag agcaagacaa gtccggctgc
     4321 aactaacgtg taaacagaca gcgtcgggct aacaaaaata ttttgagaca agagaaactt
     4381 ttgcagtgcg tattgagagg ctgtagttat aacgagtgcg attataacag taatgatatt
     4441 tgatggaaaa aattgcttca tcaaaaaacg ttgcagttgg ttgggagcag cgccaagtgt
     4501 aatgagaaga acgatctcat cttttgccga tgcaatcgta agttgtatga agagtgtaaa
     4561 gatgagcagt gcaaacaaaa acattaaccc acccgttatc catgagatca cgacaacggc
     4621 attaatgatc ccgcgatatt tctcaaaacg tgttttttca gcattggtgg aaagaccgtg
     4681 cgccctgaga taggaagaca gttgcggatc acctgcatcc ttcgtttgaa taataacgcg
     4741 tgacggcttt gcacttacgc ctgttccaaa cttttgattc gcccaatcca tgaaaggctg
     4801 tggcacaagc accgaagaaa ttctatcgct gaaaccaacc actctaccat aataatgaac
     4861 catccctgtg gggccttcga tgtctatctg aacaggcaga ttctttacga gatcctgcga
     4921 gagttgaggc aaatgctgcg attgcgcaaa tccgaaatta tacatgtcta gaaacatgtt
     4981 tggaatgatc ataggaatga aagtgctgtt ctcattccat tgccagtcgg gcgtatttac
     5041 atccaggaac tcgtctggta cactttcaaa aaagaaatca gtgtaaaaag ggatttggcg
     5101 gctcacactc tgcacaccta cgcggaaacg gctcggcgtg agggcgccta ttttttcaac
     5161 aaacggttgc tttctaagat catcgatctc cggcgcagtt aaagtcgcgt cgccaacatt
     5221 tttgtctgtg acaattttat tgatgacaag aaaatcggca atgctatcct ggcttgtttt
     5281 gttgtacagt agctcctgat aattggattg aatttgcacg gcggcgagta tcaacaataa
     5341 tgcaataaaa agccccgtta ctgccatcgt attacggctg cggccggagg cagttcgaat
     5401 taattttctt aacagggcgt tcagcattaa ttccgtggtg ttataaattc aaaacttttg
     5461 tgtaatggaa atggttgtca tcttccaggt cagttaggat aaaaccagca ttgcgtttcc
     5521 tgcactcgtt ctcaataagt gccgatgctt tgtcgatatt atttttatcg agatgactaa
     5581 aaggctcatc cataatgatc cagtcaaacg gctgcatcag tgcacgtacg atcgcgatgc
     5641 gttgctgctc tccgtaactg catgttgacg cccgttggtt caacactgaa tgaattccca
     5701 actggtcggc catttcatca attttatttt tttcgtaaaa aggtttttga aggactcttt
     5761 ttaattcaat attctcttgt gctgtaagat tttggaacag gcgcaggtcc tggaagatga
     5821 tgctaatatt tttttgccgc atcgcagcaa gctgatcagc tttgattgcc tttaaatgct
     5881 gaccgtccca taacaccgtg ccttcaaaat catttctcaa ccggtaaatt atgtgcacca
     5941 gcgttgtttt gcctgtaccg ctcggcgctt tgatcttaat aaactctgat tgcccgaaat
     6001 gcaatgcctg gttccatacg gcagaattgc gctgcagtaa tcgatccttc aaagggatcg
     6061 gaattatgtt ctgtaattcc agttgcatct gttgttcgct gacttgaaag tatagaatcg
     6121 caaacggtgg acttcgggta aggacatgtt caacaataga tcaatttaat cggagctttt
     6181 tggttgcgga atatctggca ttcgctgaat gctgtcttcg tccaggggtg gatgtatgcc
     6241 gacatttgtt cgatgttgcc aatcgtggtg cgcaacggcg ataaatttta cgaggctggc
     6301 gaggctattc tcattttgat ttacggtgtt caactcgaac gcagatgtgg ttgttttacc
     6361 atctcctttt tcagtataac cgataaaatt tttgaacgtt gatttcgccg cttgccatgt
     6421 tttgccggaa tcggaaaaag cataagaatt gtgaacagta acctgccgcg atgtatcgag
     6481 caatttttct atatcaacat acatcgcggt ggacttaccg ttgatctctt tctccacgtc
     6541 tgctgacagc gctgacttgt tgttggatga ttcatacgcc ttgatcaacg catcgtctga
     6601 ggcaatgaaa agattatcag gagtcgcttc gataacaaag tcgtgcccgc cgaaaatccc
     6661 gagttgatac tggtcaccat tcttcgttaa tacgcgctgt ttaacaagcc cgttcatcac
     6721 ccggttaaac gctgccctgt cgccgataac agcattcagc aggaattgtg cagccggtct
     6781 tttggcgttg atccccggca tagttggaat tgtaccttct tcgatcctaa aatcggagaa
     6841 gatgacgccg atatctcctt tgaatgcgtt caccacatcg gtggttgtga agcccgcttc
     6901 agacaaatat ccgtcagcca tcgtgtcgaa tccgaggtac tgcaaaatat cgatcaagac
     6961 tttcggattg aaagccacga caccaaatcc gttaacctga cctggatacc ggctgatcaa
     7021 cgtcttgtcg atctcgcgcg agggatattt ggacagaata tcggaaagtg ttttattgta
     7081 atgagtttcg gcggacgctt tggccttgcc cttttcaaaa gttatggtgc cttctgtata
     7141 agtgccctgc aataaactgc tcatttttgt cattcccaac atgccgaacg acgccaggtt
     7201 cggcgaggcg ttgatccaaa aatgaatgtc gccggtcttc ttcatcatgt ctctgaattc
     7261 acctactgat gctattgacg cagattcatt ttgtgtgaaa agagtcgtga gctgttgatg
     7321 tgaacgagcc tcgtctgaac cggctccggc atgagtactt cctgaaatga tcaggatatt
     7381 attcttccat ccggcaacat atccgttctt aagatccatg tactgatact ttgaatcttg
     7441 ctttacctca gcgccctggt tatgcttctt taaaaagtca acgagctttc cctcgttttc
     7501 aatttgcgcc accagtccaa aatttgctgt gtttccgttt tgaatagaat tattttgatc
     7561 actgaaaata aagaacggga ctttaagatc gattccagaa tttgttatct cggaccaacg
     7621 aatcggcatt tctgtttctt catctgaaag aagatctaca agagaatcga tcgtaatgcc
     7681 ggaactgttg attttctctt tgatcccatt cacgtccacc atgaatattg ctgcagcatc
     7741 ttttggaatg aattctgcca gtggagagac tggcttctta catccaaaga caaacatcgt
     7801 aatcacaacc gctgataaga atctatgttt catctggaaa taaattaagg aagaaaacga
     7861 aggtattgaa taatgcggct taacctcacc gcatccattg agtcgtaaac tgcttcgagc
     7921 atacgctgcc gtacttttag cgtgctgatt tttgtgttct caccaccgtc aggatttacg
     7981 cggttagaaa gaaaaacaaa cagcaagtga tatctcggat ctgcccatac acatgttcct
     8041 gtgtatcctg tgtgtccaaa tgtttcgggc gaggcgctca atgccgggta tggttcttca
     8101 cgcgtggcat tatctttttc cggcttatca aatccaaatc cccggcggct gatatcgctg
     8161 tgatacgcgg tgaaataatc tattgtttcc ttctttaaat aacggtgccc gttccattca
     8221 cctccattca atagcattgt atacaggaca gcgagatcat gcacgttact gaataatcct
     8281 gcatgacccg ctacaccacc aaacatagca gagcccggat catgtacata acccgtaagc
     8341 aattgcatgc gaaattggtg ctcatgctcg gtgggagcaa ttgtattcaa tgatatatgt
     8401 tcattcggtt tgaacgtggt attatacaaa tacatcggtt tgtaaaacgt ttcttccaca
     8461 taattatcca ggctcatccc cgtgatctgc tcaacgatct ttccaaggaa gataaaatca
     8521 ttgtcgctgt atacatattg ttttccggag accttgctct gtactatacg ctcaaacatt
     8581 gtgtcaaccc aatcgttacg catatacata ttcgctgcaa catggatcat gtgtgcggaa
     8641 tcagggaacg gacgataaat gctttcacgc gcaacgcccg ttgccggatc gatcgtttcc
     8701 tggtaaaacg gaataaaggc aaccagacct gcctggtgca gcagcacatc ttttaataca
     8761 aggttgctct tattcgaatg gcgggcccat ggcaaataat ctccgatagt tttaaaaata
     8821 tccagtttgc cctcttcgta caacttcatt attgccagcg tcgtggctga gacctttgta
     8881 acagacgcaa ggtcgtacac ggtatttaat gtgacaggct gttgcctgtt gtacataaaa
     8941 tatccatacg ttttactcca tattattttg ttgtccttcg caaccaatac aacgcaaccc
     9001 ggaaacgcgt gcaggtaaat cgcagtattc gcgatagtat cgatcgttag aagcccggta
     9061 ctgtcaacgt aaacatcaga tgggctggtt tgttgcagtt ctaacaatcc atagttatcg
     9121 atcccatcgc cgtaatgaaa agcatcgcaa actgtcaccg gtaattttcc atgtgcaacg
     9181 aagtcgccgt tcaaccaatt gaaagcttcc tgctgaaata ccgggtcgtc ttcataacac
     9241 gcaacaagat cttttgcgtc gcagaaattt
//
LOCUS       DASQJI010000532        21622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_219037,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000532 DASQJI010000000
VERSION     DASQJI010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21622
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219037"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..893
                     /locus_tag="VEV83_14420"
     CDS             <1..893
                     /locus_tag="VEV83_14420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46369.1"
                     /translation="AISFCCLAAESQSSFNTKLQAADSFYFANDWNNAVSLYNELLTD
                     TSTNSLALQRLGFAYYNIGKIDEALRNFHRSETANPPAAMQPYLYSRMAKAFSIKNDY
                     EKAFEYLDKAVAAGYINLNELDSARDFASLRDKPAFKERRTKIYNTLYPCYTNARARE
                     FDFWAGEWDVYATGTKNLVGHSIVQIISGGCALLENWEGQNSTGKSINFIDPGTNKWK
                     QSWAGSYANGIQEFVNGEYKDSAMRFEFETKNAQGQKMIGRFIFYNEGANQVRQFNET
                     SADEGKTWTTSYDFTYIRRK"
     gene            complement(1039..3489)
                     /locus_tag="VEV83_14425"
     CDS             complement(1039..3489)
                     /locus_tag="VEV83_14425"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46370.1"
                     /translation="MKRFALINVKAAFSLLLLFLILASHITAQSTGDFRSKKNGLWTD
                     ISVWQTYNGSSWLAANKYPNYNDKTITIQNTVTIQAIALDVDQVVINAGSSLNVTQSA
                     ILRLKNGNGSDLQNNGTLKVVGSTVRFDNGANLLNDLQGTFTFQQTNIVAGAGTLTNK
                     NVLSTSTSLLLPDSITCNQVSGIITGGTLNIAGTLNVSSGDIKVPVTLLNTAVFNINT
                     VSPKHLSSITNNGTINWNVGAINFYPGSLFTNNSQLNVYGQRTLPDTLTFEQVSGSIM
                     GSGSLRITDTMNVSGGDIKVPLTILNGAVMNINSTSAKNLSSLTNLGIMNWNTSNIGL
                     HAGAIFTNSGKLNIYNQGTLVNADNIATSLNNTAKGKIDKFPAKYDNTTIAADMNNDG
                     SIIVHGGTLDIKAAFHNRNIFKLEKLSSFLIEGSYYAEASEVFGDSGYISNLGTVFIN
                     YSDTLPQAMRFDNYGALNGTGQLFVPGSMYLYGSSAIPVTITNTGTCESLAANLAAPF
                     TNNGVTYLSTGLTKTSADIINNGLALLDNDFCTFQPLGPAARFVNNGELKGSYGYPST
                     LIMYFPFVNSASGTLSGIGALRFEDTLINRGSINPGLKNPGQLPFFFGPFRNTSTTNI
                     RIGKNANNQTKADNVFVYYNGETNVAGTLNLYQATSVVDTGYYTIVDTYGMLGDTDIV
                     GSFSVINKPSNWDVIYANNSVKVHIKAPEPFAQAFASNQLTSGIRNDSKFDAPCLIFP
                     NPARFTVTVQFNSVKAGSFLIELYDPSGKRLLFKTGSVNAGANRIELDVNGCPAGVCF
                     INLIDAEGTRKSLSFVKQ"
     gene            complement(3704..4684)
                     /locus_tag="VEV83_14430"
     CDS             complement(3704..4684)
                     /locus_tag="VEV83_14430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46371.1"
                     /translation="MKMKGTPIVILFLFITCTKEKNLNKQTSSALTYAVALDTAMIPL
                     NDLGTGTFMGYTGGLYPGGANNASGQYASDLLAFSNSIVPIDKSGTPSSTGKVVFISL
                     GASIGGRNMVALKAKTTNNPATNPNLLLLNCNQGSGFASLNDIMNPKSVYWLHVDGIV
                     KQQSSYRQVQVIYLETDDSARVRFPGKPLIVKDHIDSCLRVIKQKFRNAKVVYVEART
                     RTFAGFQNWNKEPGPYYFGWACKWAVEDQINGVPGTQYKGPKPVAPMITWGFYEWADS
                     LPRTTDSFYWRSYMTRDGLHATTEYQDTLALRFQKFLLTDPYASIWYAKH"
     gene            complement(5274..6122)
                     /locus_tag="VEV83_14435"
     CDS             complement(5274..6122)
                     /locus_tag="VEV83_14435"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK46372.1"
                     /translation="MKAFLGMGLLGSNFVKAMLKRGEQVQVWNRTASKAQPLEIFGAK
                     VFEDVSEAVRGADVIHVTLKDDAAVNDVLNNAASGFEENVTIIDHTTTSAKGAIERTR
                     AWHEKGFTYLHAPVFMGPQNALESTGVMLVSGDQDVIKKFEPQLSAMTGKLVNFGDEV
                     GKAAGIKLTGNLFLLSLTTGLSDALALAKCHSIRNEELLDLFNAWNPGASVPGRLKTI
                     TARKFNQPSWELSMARKDAGLMMTAADEAGINLTLVPAIAALMDDYIAKGHGNDDWSV
                     IAKDNV"
     gene            6696..8150
                     /locus_tag="VEV83_14440"
     CDS             6696..8150
                     /locus_tag="VEV83_14440"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type B sorting domain-containing protein"
                     /protein_id="HYK46373.1"
                     /translation="MNLRVRGASAIGSQLILVALHFSTGSYGQLCNGSLGDPVVNITF
                     GTGSNGNLGFAPPSAYTYINSQCPNDGTYTITNYTSGCFNNHWHTVSKDHTGGGDYML
                     INASYQPGDFFVTTVTDLCPNTNYQFSAWVMNVLNTFGIEPNITFSIEAADGSLLGQY
                     QTGDIPGTSQPTWKEYGLYFTTPPDNAQITLRMTNNAPGGNGNDLALDDITFRPCGPA
                     VNASIVNHPDTVDVCEGNTSSYTFDATVASGFDTPVYQWQVSADNGRSWQDIAGANSL
                     SYMRLPTNVGAYWYRLTVTEKLSESILACRVASNTVVINVHANPLVSAGPDRILIAGT
                     PVTLEGSVSGESPEFYWDPPLYLDNDTILRPASSPPADYHYTLYATSAYGCKENDDVL
                     VKVVAGIFVPSAFTPNGDGINDHWHIPFLDPLLEASVFVYNRYGQLVYHVEGETVDWD
                     GNFNGQPQGSGAYVYYIKFKSQYPQMKGTVLIIR"
     gene            8253..11000
                     /locus_tag="VEV83_14445"
     CDS             8253..11000
                     /locus_tag="VEV83_14445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK46374.1"
                     /translation="MKRLSLAIALLVSIQLLPAQDKKSTAQPTFVTSVEGVKEYRLDN
                     GLQILLVPDPAINNVIVNVVYHVGSRNEGYGETGMAHLLEHMLFKGSKKFSNIKQTIA
                     DKGATANGTTWYDRTDYFEILPANDSNLTWALDMESDRMVNSLMKNEDLQKEFSVVRN
                     EFEAGENYPDNILTERILSTMYVWHNYGKSTIGSKEDIERVPITNLTQFYQKYYQPDN
                     ATLIVGGKIDEAKTLQWIAKYFAPITKPSRMLQPSYTVEPPQDGERFVELRRNGDISY
                     IGMAFHTPSYADPDFAANRAAANVLTNDPSGIFYKALVETKLATDVSGWTPTLYDPAF
                     SYFACSVPKGKSVDSAENAFRQTADQLATTSITQEDVDRAKNALEKQVFNFQNNTESF
                     CIGLAEIIGAGDWRLFYLYRDRLEKLTLEDVQAALHKYYLPSNRTWGVFIPDKSADTE
                     RVAIAEHPDINSVLKNYKGRSTVARTETFEASIPNIKKHTEYGTLSNGMKYALLKKPV
                     KGDKIYANLEFKVGDENSLTGKNIIPMLTARMLKNGTTSKSKKEINDALDKIKTSINI
                     SGGGPSISVSISTDSTNLDAALELLSDMMLHPSFDKAEYDKMVLDIKAELEANASDPQ
                     YLAIQAVEKKTRLYPKGHPFYPESINEQLTDLQNVSLDQVKDFYNSFYGANNGYAAFV
                     GSINAPAIKSFFEKNFSNFTSKQHYTEVPEKYFAVGGSVESIDVPDKKNAMLFARLNV
                     PLKENDPDFVALDIANEMLGGGAFLSSRLPQRLRESEGMSYGAGSFLSSTYKYPASSW
                     GMYAIFNPTYKNRLDSAMRDVMTTALKDGFKEDEFKKAVASWLQQRQTWLTDDRELPW
                     RLTNYMSDGKDLSFYSDYEGKAKALTLEQVNAALRKYISLDKITFIYTGDFKEQQPGK
                     L"
     gene            11317..12192
                     /locus_tag="VEV83_14450"
     CDS             11317..12192
                     /locus_tag="VEV83_14450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HYK46375.1"
                     /translation="MKVNFKFMATAMVFMLSLSCVSTKKYQALQTDYAALQGRNNSIG
                     KQYEDCNNELGAANVRISGLQDQLRAEQGHLAALQDALDKCLTSTSQGNTNISKLVDE
                     INASNKYIQQLIASKNKSDSLNMVLTNNLTRSLSREEMQDVDVQVLKGVVYISLSDNM
                     LYKSGSYEISDKASETLSKIAKIITDYKDYEVLIEGNTDNVPISKPNIRNNWDLSALR
                     ASSVVQALQTNYAVDPKRLTAGGRGEYNPIASNDTDEGKARNRRTQIIITPKLDQFMD
                     LIGHPPAADSTGANQ"
     gene            12392..13075
                     /gene="rpiA"
                     /locus_tag="VEV83_14455"
     CDS             12392..13075
                     /gene="rpiA"
                     /locus_tag="VEV83_14455"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HYK46376.1"
                     /translation="MLTQDAIKQQLGIYAADLIKAGMKIGLGTGSTVYYLLKEVGKRK
                     KQGLDFTAVCTSVQTQKILDEEGISYLSLDDVDRLQLTIDGADEVDAAGNLIKGGGGA
                     LLQEKIVAAASEQLAIIIDEKKDVQTLGAFPLPVEVITFGWRQVKHKIESTYNIQTTL
                     REKEGQPFTTDHKHFILDCYFKTIPDPKGLNTELHLIPGVVETGLFVGMATHIIIGYA
                     DGSIRSRNV"
     gene            complement(13140..15362)
                     /locus_tag="VEV83_14460"
     CDS             complement(13140..15362)
                     /locus_tag="VEV83_14460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin receptor-like dimerization
                     domain-containing protein"
                     /protein_id="HYK46377.1"
                     /translation="MNKFFLLPALLVSLAARTQTITGFSGNDVALQLQTEQKFDDQLN
                     AAHIGSTIKQLSSKPHNLGSPGSKEVADTILNRYKSYGFDAHIETFTVLFPTPKTRLL
                     QMTEPTVYKALLKEPALKEDATSGQPDQLPTYNAWSADGDVTGELVFVNYGLPGDYDK
                     LAEIGVDVKGKIVIAKYGHSWRGIKPKVAQEHGAIGCIIYSDPMDDGYYQGDVYPKGA
                     FKNEFGVQRGSVMDIPVYPGDPLTPGVGATENAQRLASHNEAPNLLKIPVLPISYHDA
                     KPLLEALDGPVVPGGWQGALPITYHIGAGKTKVHLKLEFNWNMVPCYDVVATLKGSEY
                     PDEWVMRGNHHDAWVNGANDPISGQAAMLEEAKAIGELLKTGWRPKRTIVYCSWDGEE
                     QALLGSTEFAEEHAKELQQKAVIYVNTDANGRGFLGAGGSHALQPLVDEISKTVTDPQ
                     TNVSVYERWKADKATNAATAKAKKDALQANTLDLRALGSGSDYSSFLQHLGVPSLDLG
                     FGGEDDGGEYHSIYDSYDDYRRFKDPDFAYGVALSKTAGRAILRMADADMLPFDYSVL
                     YKTVNDYTTELISVTNDMRDATAVENQLLRQNDYKLAADPTKTFIAPTPKDEVPYLDF
                     SPLQNALNSFKVVTDTLSSVLKKMATQSKANENINVQLFRAEQQLLLPNGLPRRGWYM
                     HSLYAPGFYTGYGVKTLPGIREAIEQRKWKEAQEQINAATQAVQKLSDYLANIQRGIL
                     "
     gene            complement(15544..16368)
                     /locus_tag="VEV83_14465"
     CDS             complement(15544..16368)
                     /locus_tag="VEV83_14465"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HYK46378.1"
                     /translation="MKTSNFTTSIVVDQTPEEAFNAINNVRGWWSDAVEGDTNELNDE
                     FTYRHKDIHFSKQKLVDVIPNKKVVWLVEDSYLAFTNDKTEWTGTKINFDISEDKGKT
                     QIRFTHEGLTQQTECFDACSNAWSYYLRESLLPLITTGKGQPDHNTETQPVNREMTTT
                     EVAARFNELAQQEKWFDIQDELFADDVRSIEPVEALHLHNAEGKAAVRKKGEDWVRRI
                     EAAHKRYTTPPIIAGNHFVVGREVDITVHGIGRIQINQLMLYQVKNGQIVSEQFFY"
     gene            16504..17484
                     /locus_tag="VEV83_14470"
     CDS             16504..17484
                     /locus_tag="VEV83_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK46379.1"
                     /translation="MKHLTILVPDGQNNLSSIVGAYKIFSRANKYRKEQGGRELFKIE
                     LAGISKRVDFYDSLFSVMPHTQISAIKKTDLVIIPSLNHNYQKTVRKNRPVIDWIEKQ
                     YKEGAEIASICTGAFLLASSGLLDGKTCSTHWSAADNFRTMFPRVKLQTDQLITDENG
                     IYTNGGAYSFLNLLIYLVEKYYGRPTAIFCSKVFQIDINRQSQSAFIIFSGQKLHGDD
                     VVKKAQTYIEDHVDEKISVEHLSSRFAVGRRNFDRRFIKATGNTPVEYLQRVRIESAK
                     KAFEASRKTVNEVMYEVGYSDPKAFREVFRKCTGVSPLEYRSKYNKDALV"
     gene            complement(17498..17704)
                     /locus_tag="VEV83_14475"
     CDS             complement(17498..17704)
                     /locus_tag="VEV83_14475"
                     /inference="COORDINATES: protein motif:HMM:NF020967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HYK46380.1"
                     /translation="MEGWFKLYSTKNYAEANILKGMLEENNIRAVILNKLDSSYLSFG
                     EIELYVPAHLKDIAIHLMNNALSN"
     gene            18174..18260
                     /locus_tag="VEV83_14480"
     tRNA            18174..18260
                     /locus_tag="VEV83_14480"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18208..18210,aa:Leu,seq:gag)
     gene            18657..19874
                     /locus_tag="VEV83_14485"
     CDS             18657..19874
                     /locus_tag="VEV83_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HYK46381.1"
                     /translation="MTAFGGPQGHFGMMLKNFVHRRHDLTEQELLEYNAFCQMLPGAS
                     STQTLTLIGYKRGGIPLAIITLLIWITPASILMGLFSFLLGYISDRNTVADLFNFIQP
                     MSVGFIAFSAYRMSKIAITNTITVVIMSVAAILTFVIFKTPWIFPSIIIVAGIATNFS
                     SKRIPQKGIPPKKIKWANILIFFAVFALAGYVSETARKENWKDRGPYNLFENFYRFGS
                     LVFGGGDVLIPMMYQQYVVRPTTERAEKVNPGALRIDKEDFLTGSGMVRAIPGPVFSI
                     GAFVGGIAFDADGPKMQIIGCIVGAIALFLPSLLLVLFFFPVWHNLKRYAVIYRSLEG
                     INASVVGIMIGSTLFLLKDISVDISTGAVTPFANIVVIAGTFLLLSFTRIRPQFIPLL
                     CLALGVCLNYYHL"
     gene            complement(19865..20431)
                     /gene="nadD"
                     /locus_tag="VEV83_14490"
     CDS             complement(19865..20431)
                     /gene="nadD"
                     /locus_tag="VEV83_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HYK46382.1"
                     /translation="MEIGLFFGSFNPIHTGHLIIASHVLNYTSLNKIWFVVSPQNPLK
                     DSCHLLDATQRLKLVGLAVDNDDRFLVSDVEFQLPKPSYTIDTVHYLQHTYPENRFRL
                     IIGSDNLLDLPRWKSHEKLLEEANIIVYLRPGYPVDASKPGIEVLSAAQLDISSTKIR
                     ELIRNGKSARYLVPDVVLKEIVTNNYYR"
     gene            complement(20452..20676)
                     /locus_tag="VEV83_14495"
     CDS             complement(20452..20676)
                     /locus_tag="VEV83_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HYK46383.1"
                     /translation="MKLSDLRVGQQAVIKEFGQDEISIKLMEMGFIPGEIIYIEKFAP
                     LGDPISVCVAGYSLSLRLNEADCIYVDAVK"
     gene            20742..21176
                     /gene="ybeY"
                     /locus_tag="VEV83_14500"
     CDS             20742..21176
                     /gene="ybeY"
                     /locus_tag="VEV83_14500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HYK46384.1"
                     /translation="MASVSFYSADVSIPIKHRAKVRKLIIHLFAEERTPLQTLSFIFC
                     SDKYLLRLNKKHLNHDYYTDVITFDISNPSDQVVGEIYLSTERIKENAKAYNETYEKE
                     LLRVMIHGALHLCGYKDKTTVAEKKMRVKEEYYLQLFRKRFT"
     gene            21173..>21622
                     /locus_tag="VEV83_14505"
     CDS             21173..>21622
                     /locus_tag="VEV83_14505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46385.1"
                     /translation="MKHWLIFVFVLVGQFGYSQKMLLFKDAIIPTPHIDRQVRSWIER
                     QPAFDELSSTEQNFYYWVNYSRANPRRFLDSVVIPITEVYPQLKGEYFESLRSELMAV
                     DSLPMLVLNGGLIRLAKNHAIDITSHDAKPSHNSTNGDTFSDRFRKEK"
BASE COUNT         6078 a         4807 c         4788 g         5949 t
ORIGIN      
        1 ctgctatttc gttttgctgc ctggctgctg aaagccagag ttcattcaac acaaagctcc
       61 aggccgcaga ctcattctat tttgcaaatg attggaataa cgcagtcagt ctttacaacg
      121 aactattgac agatacatca acgaacagcc tcgcgctgca gcggctcggc tttgcgtatt
      181 acaatattgg gaagatcgat gaggcgctca gaaactttca caggtcggaa actgctaacc
      241 ccccggctgc catgcaaccg tacctctatt cacgaatggc gaaagcattc agcataaaaa
      301 atgattacga aaaagcgttt gaatatctcg ataaagcagt tgccgcagga tatattaact
      361 taaacgaatt ggattccgca agagactttg cgtcacttcg agataagcca gcatttaaag
      421 aacgcagaac gaaaatttac aacacgcttt atccctgcta cacaaacgca cgtgcacgtg
      481 aatttgattt ttgggcaggc gaatgggacg tatatgcgac cggcacgaaa aatttagtgg
      541 gtcatagcat tgttcaaata atttccggcg gttgtgcttt acttgaaaac tgggagggcc
      601 agaatagcac ggggaagagc attaacttca tcgatcctgg tacaaacaaa tggaaacaat
      661 catgggctgg ttcttatgca aatgggatac aggagttcgt gaatggcgag tacaaagaca
      721 gcgcgatgcg gtttgaattc gagacaaaaa atgcgcaagg gcaaaaaatg atcggccgat
      781 ttatatttta caatgagggc gcaaaccagg tgcgccagtt taatgaaacg tctgccgatg
      841 aaggaaagac atggacgacg agttatgatt ttacttatat aaggcggaag tagtttcaaa
      901 agcggaccaa ggcaagacgc ggctaagaat tgtgcgatta cgtcgcgccg catttgtaac
      961 taaacccgta gcgctggtta aaaaaggtat aaccgatgac agccggaaaa tttccggacg
     1021 gctaacagtg cggatcttct attgtttcac aaagcttagc gattttctcg tcccttctgc
     1081 atcaataaga ttgataaaac aaacccctgc aggacagccg ttcacatcaa gctcaatcct
     1141 attggcgccg gcattaaccg aacccgtttt gaataacaat cgcttgccag aaggatcgta
     1201 caattcgata agaaagcttc ccgctttaac ggaattgaat tgaactgtaa cagtaaagcg
     1261 cgcaggatta gggaagatca aacacggcgc atcgaatttg gaatcatttc taatgccgga
     1321 tgtaagctgg tttgatgcga aggcttgtgc gaaaggctcg ggggctttga tatgcacctt
     1381 cactgaattg tttgcatata taacgtccca gttcgaaggt ttgtttatca cggaaaaact
     1441 tccaacgatg tctgtgtctc cgagcatacc ataagtatcg acaatggtat aataacctgt
     1501 atccacaacg cttgtcgctt gataaaggtt tagcgttcct gccacatttg tttctccgtt
     1561 gtaatagaca aacacattgt cggcctttgt ttggttattg gcattttttc caatcctgat
     1621 attggtggta gaagtatttc ggaaaggacc gaaaaagaat ggtagctgtc ccgggttttt
     1681 aagtccggga tttattgaac cccggttaat caaagtatct tcaaaccgaa gcgctcctat
     1741 acctgaaaga gtgcctgacg ctgaattaac gaacggaaag tacattatca gcgttgaagg
     1801 atatccgtaa cttcctttta gctcgccgtt attgacaaat ctggctgcag gaccaagcgg
     1861 ctgaaaagta caaaagtcgt tgtcaagcag ggcaaggcca ttattaatga tatcggcact
     1921 tgtctttgtg aggccagtgc tcaggtaggt aacgccgtta tttgtaaaag gcgctgcaag
     1981 atttgccgcc aaagattcac aggtcccggt attggtaatt gtaaccggaa tggcggagga
     2041 gccgtacaga tacatgcttc ccggcacaaa taattggccg gtgccgttca acgccccgta
     2101 gttatcaaat ctcatggctt gaggcagcgt gtcggagtag ttaataaata ccgttccgag
     2161 attcgaaata taacctgaat cgccaaatac ctcagaggcc tccgcatagt agctaccttc
     2221 tattaggaaa ctgctaagtt tctctaattt aaaaatattc ctgttgtgaa aagcagcttt
     2281 tatatctaat gtaccgccat gaacaataat acttccgtca ttattcatat cggcggcaat
     2341 agttgtgtta tcgtacttcg cgggaaactt atcaatcttt cccttggctg tattatttag
     2401 actcgtcgcg atattgtccg cattaaccag ggtgccctga ttataaatgt tcaacttgcc
     2461 gctgtttgta aatatcgcac cagcatgcag accaatattg ctggtattcc aattcatgat
     2521 cccgagattt gtaagggagg ataaattttt tgcagatgta ctattaatat tcatcacggc
     2581 gccgttgaga atggtaagag gtaccttaat gtcaccacca cttacattca tggtgtctgt
     2641 tattctaagg cttccgcttc ccattatgct tccagagact tgttcaaaag tcagggtgtc
     2701 aggcaaggtc cgctggccat aaacgtttaa ttgcgagttg ttggtaaata atgacccggg
     2761 gtaaaaatta atagctccga cattccaatt aatagtgcca ttatttgtaa tggaggacaa
     2821 atgttttgga gacacggtat ttatattgaa tactgcggtg tttaacagtg taacaggtac
     2881 tttaatgtca ccgctgctta cattcaatgt gccagcgatg ttaagagtgc ctccggttat
     2941 gattccagaa acctggttac atgtgatact atcgggcaat aaaagactgg tcgatgtgct
     3001 taacacgttc ttattagtga gtgtacctgc ccccgctact atatttgttt gctgaaatgt
     3061 aaaagttcct tgcagatcat tcagcaggtt tgcaccgttg tcaaacctca cggtactgcc
     3121 gacgactttc agggtgccgt tattttgcag atcggaccca ttgccatttt tcaaacgcag
     3181 aattgcgctt tgcgttacat taagcgacga tccggcattt atcactacct ggtcaacatc
     3241 taatgctatg gcttgtatag ttacggtgtt ctgaatggta atggttttgt cattatagtt
     3301 aggatacttg tttgcagcta gccaggaaga gccgttatag gtctgccata cactaatgtc
     3361 tgtccacagg ccatttttct ttgatctgaa atcacccgtt gattgagcgg ttatgtggct
     3421 tgcaaggata agaaacagta gcagcaaaga aaaagctgct ttgacattta ttagtgcaaa
     3481 gcgtttcatt tcgcaatcag tttagtttga taagttcttc gacaaacata tcgttttctg
     3541 ccctttaaag caaatgttcg tcgaattgcc ttcatcgctg cagttcacct tgcgaactcg
     3601 tcgggtggac acgaaacctc ttcccatgaa agttattctg actggggcaa atctcttctt
     3661 ccgagagaca atgctgtata agaagttgca gctgaaatta gcatcaatgc ttcgcatacc
     3721 agatgctcgc atacggatct gtgagcagaa atttttgaaa acggagtgcc agtgtatcct
     3781 ggtattcagt ggtcgcatgc aatccgtctc tggtcatata agaacgccag taaaagctat
     3841 cggtagttcg ggggaggctg tctgcccatt cataaaatcc ccacgtgatc ataggcgcca
     3901 ccggtttcgg ccctttatat tgggtgcccg gaacaccgtt gatctgatct tcaacagccc
     3961 atttacaggc ccagccaaaa taataaggtc ccggttcttt gttccaattc tgaaaacctg
     4021 caaaagttct tgttcgtgct tcgacataca ccacttttgc attacggaat ttttgtttaa
     4081 tgacacgcaa acaggaatcg atatgatctt ttacaatcag cggcttgccg ggaaatcgca
     4141 cacgagctga atcatcagtt tccaggtaaa ttacctgcac ctgtcggtaa cttgattgtt
     4201 gtttaactat gccatctaca tgaagccaat aaacactttt aggattcata atgtcgttta
     4261 aagaagcaaa tcctgaaccc tggttacaat ttagtaaaag aagattcgga ttagtcgcag
     4321 ggttgttcgt cgttttagct tttaacgcta ccatatttct tccgccgatg cttgctccca
     4381 acgaaataaa aacaactttg cccgtactcg acggggttcc tgatttatca atcggaacaa
     4441 ttgaattact aaatgcaagc aagtcggaag catactgtcc ggaagcgttg tttgcgccgc
     4501 cgggatatag tccgcccgta taacccatga aggtgccggt gccgagatca ttgagcggaa
     4561 tcatcgctgt atcaagagct acggcgtaag taagcgctga agatgtttgc ttattgagat
     4621 ttttttcttt tgtgcaggtg ataaaaagaa ataggatgac aatcggtgtg cctttcattt
     4681 tcatagctcg cgtttaaatg aagatagata aatattgcaa aaaaatgcca gccggctttc
     4741 gcattattcg tgtccgaaaa agactcttaa aataacgtgc tttgccatta acatcgacac
     4801 gaaaaattct gttaagctag tttgttgtgt cggaacgtat ggcaaccacg gcgccgtcat
     4861 gcccggcccc gaccgggcac ctgctctaag taattttaga ggccagtaaa ataatctttc
     4921 aacgccggga ttgaaatccg aaatcaattt atttttccat gaccgattcc gttttttcag
     4981 gtatttttct cttgcaattc catactctat tctgccaaat gtctcataat acacaagctt
     5041 gttgcaatta ttttgcggtg aatgaacttg gataaagcct tggtaatatt atgctctgga
     5101 attcttgtaa aaggtcagaa gatgtgcggt ccggttcatg aaacctggac actatcttac
     5161 gcaagaatcg cgatcattga actcagttta atagcacaat agttgttaga cgcattttgc
     5221 aacgcggcgc ggagtcgttg ttcgcagacg atgttacttt acgacgcgca caactacaca
     5281 ttatcctttg caataacgct ccaatcgtcg ttgccgtgac ccttggcaat atagtcgtcc
     5341 atcaatgcag caatcgcggg cacgagtgtt aaattgatgc cagcttcatc tgccgctgtc
     5401 atcattaacc cggcatcctt acgagccatg ctcagttccc atgacggctg attgaatttt
     5461 cgcgctgtaa tagttttcaa tcttccggga acacttgccc ccggattcca cgcattgaag
     5521 agatcaagaa gttcttcgtt gcgtatgcta tggcatttcg cgagcgcaag cgcgtctgaa
     5581 agccctgtgg tgaggctgag taaaaataaa ttacccgtga gctttatgcc cgcggcctta
     5641 ccaacttcat ccccaaagtt gacaagcttg ccggtcattg cagaaagctg tggttcaaac
     5701 tttttaatta catcctggtc gcccgataca agcatcaccc ctgtgctctc cagcgcattt
     5761 tgcgggccca tgaacacggg agcatgcagg taagtaaaac ctttttcgtg ccatgctctt
     5821 gttctttcta ttgctccttt cgcggatgtt gtagtgtgat ctattatagt aacgttttcc
     5881 tcaaaaccac ttgctgcatt attcaacaca tcgtttacgg ctgcgtcgtc tttcagtgtt
     5941 acatgaatta catctgcgcc gcggacagct tcactcacat cttcaaacac cttcgcacca
     6001 aaaatttcca gcggttgtgc ttttgatgct gtgcgattcc aaacctgcac ttgttcaccg
     6061 cgcttgagca tcgctttaac aaagtttgag cctaataaac ccatgcctaa aaacgctttc
     6121 atattactga tgatttgtgc aaagttatat cggcgtcgat tcatcttcgc caattcacag
     6181 cctatgtgct ctcatttcat gtttactgtt ggtgtttctt tttggaacgc tacggcacta
     6241 cgaatacacg aagaacagga cgtgttgcat tttcttaata accgttcaaa gtcggtatgg
     6301 ccttcgtggt tcgtggtgtt cgtcgtgcgc ctttttcaca acaggaaaac aacgcacaag
     6361 ggccttttcg ttcttgagta cagtgcttga aacgtgctca acaatgtttt atcgccaaag
     6421 ggctgcggga tgcgaaaggc ctggtgcgaa cgcagtaagc accgcagcga agcggagcct
     6481 gtagcagccc ggactgctgc tgatttaaat gcgaacgatg agagcccctg aaaccaaaac
     6541 catcaatccc gcaaaaccgt cttatcaacc aacgagctag cttgacaatc tttccccatg
     6601 cagccacaca atgcaaaagc atgtctacta tgagctgcat ttccatcccg tggttaaagt
     6661 ttgcagcgca atgggtttta tttaattttc cgaccatgaa tttaagagtg cgcggcgctt
     6721 cagcaattgg atcacaattg atcctggtcg ctttgcactt ttcaaccggc tcctatggtc
     6781 aactgtgcaa tggaagcctg ggagatcccg tcgtaaatat cacattcggc accggcagca
     6841 acggaaattt gggtttcgct cctccgagcg catatacata tatcaactcg caatgcccca
     6901 atgacggcac ttatacgatc acaaattaca catccggatg ttttaataat cactggcaca
     6961 ccgtcagcaa agatcataca ggcggtggtg actatatgct gataaatgct tcctaccagc
     7021 cgggtgattt tttcgtaacg acagtaactg atctttgtcc gaacaccaat taccagttct
     7081 ctgcatgggt gatgaatgtg ctgaacactt tcggcatcga gccgaacatc accttcagta
     7141 ttgaagctgc cgacggaagt ttgttaggcc agtaccaaac aggagacatc cccggaacgt
     7201 cgcaacccac atggaaggaa tacggacttt attttactac gccaccggat aatgcgcaga
     7261 tcacattgcg catgacgaat aatgcacccg gcggcaacgg caatgacctt gcactcgatg
     7321 atattacttt ccggccatgc ggtccggccg ttaacgcttc aatagttaat cacccagaca
     7381 ccgtagatgt ttgcgaagga aataccagca gctacacttt tgacgcaaca gttgcctcag
     7441 gctttgatac gcctgtgtac caatggcagg taagtgcaga taatggaaga agctggcagg
     7501 atatcgctgg tgcgaacagt ttgtcgtaca tgcggctgcc tacaaatgtc ggagcgtact
     7561 ggtaccggct cacggtcaca gaaaaacttt cagaaagcat acttgcatgt cgtgttgcat
     7621 cgaacaccgt tgtgataaac gttcatgcaa atccgctggt gagcgcaggg ccagacagaa
     7681 ttttgatcgc cggtacaccg gtaacattag agggttctgt gagcggcgag tctccggagt
     7741 tctattggga ccctccgcta tatcttgata acgacaccat acttaggcct gcatcatcac
     7801 cgcctgccga ttatcattac acactttatg cgacatccgc gtacgggtgt aaagaaaatg
     7861 acgatgtgct cgttaaagtt gtggcaggga tatttgtgcc ttctgctttt acgccaaacg
     7921 gtgacggcat caatgatcac tggcatattc cctttcttga tccattgctc gaagcatctg
     7981 tatttgtgta taatcgatac ggacaattgg tgtaccatgt cgagggggaa acagttgatt
     8041 gggatggtaa ctttaacggg caaccgcagg gctccggagc ttacgtgtat tacataaaat
     8101 tcaaatcaca atatcctcaa atgaaaggta cggtcttgat cataagatag gcggtgcgaa
     8161 gacgaaagta tcgcggacga cttgctattc atcacattca tcatttcttt atcaggcaaa
     8221 acaattacat ttaaattcta aactaagcct acatgaaacg cctatcactt gcgatcgctc
     8281 tacttgtttc tattcaacta cttccagcac aggacaagaa atcaacggca caaccaacgt
     8341 ttgtgacatc tgttgaagga gtaaaagaat atcgcctgga taacgggttg cagatactac
     8401 tcgttcctga tccggccatc aacaacgtaa tcgtaaatgt ggtttaccat gttggatcga
     8461 ggaacgaagg ctatggtgaa accggtatgg cacacttgct cgaacatatg ctattcaaag
     8521 gctcgaagaa attttcaaac ataaaacaaa ctattgcaga taagggggca accgcgaatg
     8581 gtacgacgtg gtatgacagg accgattatt ttgaaatatt gccggcaaac gacagcaact
     8641 taacatgggc gcttgatatg gaatcagacc gaatggtaaa ctcgctcatg aaaaacgaag
     8701 acctccaaaa agaattttca gtagttcgta atgagttcga ggctggagaa aactacccgg
     8761 ataatatttt gacggagcgc atactttcaa ctatgtatgt gtggcacaac tacggaaaat
     8821 ctacgatcgg cagcaaggag gatattgaaa gagtgcccat cacaaacctg acgcagtttt
     8881 atcaaaaata ctatcagcca gataatgcga cactcattgt tggcggaaaa atcgatgaag
     8941 cgaaaacact gcagtggatc gcaaaatatt ttgcaccgat aacaaagccg tcccgcatgc
     9001 tgcagccctc ttacacagta gagccgccgc aggatggcga acgatttgtc gaactccgcc
     9061 gcaacggtga tatttcttat atcggtatgg cgtttcatac gccatcttac gccgatcccg
     9121 atttcgcagc gaaccgggca gcggcaaatg tgttgacaaa cgatccttca ggaatttttt
     9181 acaaagcgct ggttgaaacg aagcttgcga cggatgtgtc tggatggacg cccacgttat
     9241 acgatcccgc gttttcttat tttgcttgca gtgtgccgaa aggaaagagt gtcgacagcg
     9301 cagaaaatgc ctttcgacag actgctgacc aacttgctac cacaagcata acgcaggaag
     9361 acgtggaccg cgccaagaat gcattagaga aacaagtgtt caattttcaa aacaacaccg
     9421 aaagtttctg tattggcctt gcagagatca ttggcgccgg tgactggcgg ctattttatt
     9481 tatacaggga ccggcttgaa aaattgacgc tggaagatgt ccaggcagcg ttgcacaaat
     9541 attatttgcc gagcaacaga acatggggcg ttttcatacc ggataaatct gcggatacag
     9601 aaagggttgc gatcgcggaa catccggata taaattccgt tttgaagaat tataaaggga
     9661 ggtcaacagt tgcaagaacc gaaacgtttg aagcaagcat tcctaacata aaaaaacata
     9721 cggaatacgg caccctttcg aacggaatga aatatgcgtt gcttaaaaag cccgttaagg
     9781 gggacaagat ctatgcgaac ctcgagttca aagttggtga tgaaaatagt ttaaccggaa
     9841 agaacatcat tccgatgctc actgcgcgca tgttgaagaa cggcaccaca tcgaagagca
     9901 aaaaagagat caatgacgca ctcgacaaga taaaaacctc gatcaatatt tcaggtgggg
     9961 gtccctcaat ttctgtaagc ataagtacag acagcacaaa tcttgatgca gcccttgaac
    10021 tgttaagcga tatgatgttg catccctcgt ttgataaagc tgagtatgat aaaatggtgc
    10081 tcgatattaa ggctgaactg gaggcgaatg cgagtgatcc gcaatatctc gcaatacagg
    10141 cggtggaaaa gaaaacaaga ttgtatccga aaggccaccc gttctatcct gaaagtatca
    10201 acgaacagtt aactgatctg caaaatgttt ctcttgacca ggtgaaagac ttttataatt
    10261 cgttctatgg cgcaaataat ggatatgctg cttttgttgg cagtataaat gcacctgcta
    10321 tcaaatcttt ctttgaaaag aattttagca atttcaccag caaacagcac tacacagaag
    10381 tgcccgaaaa atattttgcg gtgggcggca gcgttgaaag cattgacgtc cccgacaaaa
    10441 agaacgcaat gttattcgcg aggctgaatg ttccattgaa agagaatgat cctgattttg
    10501 tcgcgttaga catcgcaaat gaaatgctcg gcggcggcgc attcttgtct tcgcgcttgc
    10561 ctcaacgcct ccgggaatcc gaaggaatga gttatggcgc tggctcgttt ttgtcgtcaa
    10621 catacaagta tcccgcgtcg tcgtggggaa tgtatgcgat cttcaatcca acatacaaaa
    10681 accgcttaga cagcgcaatg agagacgtaa tgaccaccgc tttgaaagat gggtttaagg
    10741 aagatgagtt taagaaagct gttgcgagct ggttacaaca gcgtcaaacc tggctcacag
    10801 atgatcgtga acttccatgg cgtttaacaa attatatgag cgacggaaaa gatctttctt
    10861 tctattcgga ttatgaaggg aaagcgaagg ctctcacgct tgagcaggta aatgcagcat
    10921 tgagaaaata tataagtctc gataagataa ctttcattta cacgggtgat ttcaaagagc
    10981 aacaacccgg aaagctttaa aattttaacc aattccactc tttgtacgcg cgggaaattg
    11041 gcgcgccatc tgagtccttt aagacaatat cgttccgaca gcttgcgcaa aaggtgaaag
    11101 atttcatgct gcagatagat gaactgttgt acatgagtcg gacttcgttt gctgcatgaa
    11161 agcatcgcta gcggcagtgc tatttttact tcacaccatg tgactaaagt tcccaacttc
    11221 tttggctatt ttcttttaca ttgcgacaac aaattatatc aacacacctt gccaagtttt
    11281 acttgaaccg catttattaa ttaaaacaat tttatcgtga aagtcaattt caaatttatg
    11341 gcgactgcca tggtgtttat gctcagctta agctgcgtaa gtaccaagaa ataccaggca
    11401 ctacaaaccg attatgccgc actacagggc agaaataatt cgatcggtaa acaatacgaa
    11461 gattgtaata acgagctcgg cgctgccaat gttcgaatat ccggattgca ggaccagctt
    11521 cgagctgagc aaggccacct tgcagcttta caggatgcat tagacaaatg tttgacgtcc
    11581 acaagccagg gcaatacaaa tatttccaag ctcgtcgatg agatcaacgc atcaaacaag
    11641 tatatccagc aattgatcgc ttccaagaat aaaagcgatt cattgaacat ggtgcttact
    11701 aataatctta caaggtcgtt aagcagggag gaaatgcagg atgtagatgt gcaagtcttg
    11761 aagggagtag tttacatttc tctttcagat aatatgctgt acaagtccgg tagctatgag
    11821 atttcagata aggcctcgga gactttatca aagatcgcga agatcatcac cgactataag
    11881 gattatgaag tgctgatcga aggcaatacc gataacgtac ctatctcgaa accgaatatt
    11941 cgcaataact gggacttgag tgccctaagg gcttcttctg ttgtgcaggc attgcaaaca
    12001 aattatgctg tagatccgaa acgccttacc gcaggtgggc ggggcgagta taatcccatt
    12061 gcttcgaacg acacagacga aggcaaagca agaaaccggc gcacgcagat catcattacg
    12121 ccaaagctgg accagttcat ggacctcatc ggccatcctc ctgctgctga ctcaacaggg
    12181 gcaaatcaat aacgtttcaa gagagtttca aataggaaag gactggctat aacggcgcag
    12241 tcctttttat ttctttcgtg cggctgggcg ggtgcgcaat attgcaaatt ttttaaatcc
    12301 gcgagcacgc gaagacgcac cgtcacgaag taagtgccat gtgaggataa cttactgttt
    12361 acgatacttg tgcttcgcta actttacttc catgcttacc caggatgcaa tcaagcaaca
    12421 actcgggatc tacgccgccg atctcatcaa ggcaggtatg aagatcggcc tcggtacagg
    12481 atcaactgtt tattatcttc taaaagaagt cggcaaaaga aaaaaacagg gacttgactt
    12541 tacggccgta tgcacttctg ttcaaacgca aaaaatattg gacgaggagg gaatttcata
    12601 tctctcactg gatgacgtag accgcttgca acttactatt gatggcgccg atgaagttga
    12661 tgcggcaggc aatttgatca agggcggagg aggagcgctg ctacaggaaa aaatcgtggc
    12721 cgcggcatcg gaacagcttg ccatcatcat cgatgaaaaa aaagacgtgc aaacgctcgg
    12781 cgcatttcca ttacctgttg aagtaataac attcggctgg aggcaagtaa agcacaaaat
    12841 tgaaagcaca tacaatattc aaacgacgtt aagagaaaaa gaaggtcaac ccttcaccac
    12901 ggaccataaa catttcatac ttgactgtta tttcaaaaca attcctgacc cgaaaggtct
    12961 aaacacagaa ctacatctta ttcccggagt ggttgaaaca ggtttatttg taggcatggc
    13021 cactcacatc atcatcggtt atgctgatgg aagtatccgg tcgagaaatg tttgaagcgc
    13081 gattcgtacg aaaggtggcc tattgagcgg tgatccgccc aggcgatgtg aaagaaattt
    13141 tacaaaattc cgcgttgaat attcgctaaa taatctgaaa gcttttgcac tgcctgagtt
    13201 gccgcattta tttgttcctg cgcttccttc catttgcgtt gttcgattgc ttcacgaata
    13261 cccggcaaag tctttacacc ataacccgtg taaaaaccgg gcgcatacaa actgtgcata
    13321 taccagccgc gtcgtggtaa accgtttggc aacagcaatt gttgttcagc acgaaacaac
    13381 tgcacattga tattttcgtt cgctttcgat tgtgttgcca tctttttcaa aacgctactc
    13441 aaagtgtcgg taaccacctt gaacgagttc aacgcatttt gcaatggact aaaatcaaga
    13501 taaggcacct catcttttgg cgttggcgca ataaatgttt tggttggatc ggccgccagc
    13561 ttgtaatcat tctgcctgag caactggttt tctacagcgg ttgcatcacg catatcgttc
    13621 gtgacagaga tcaactccgt agtataatcg ttgaccgttt tgtagagaac tgaataatcg
    13681 aaaggcaaca tatccgcatc cgccattcgc aatatggcac ggccggcggt tttagaaagc
    13741 gcaactccat aagcaaaatc gggatctttg aaacggcgat aatcatcgta agaatcgtag
    13801 atcgagtgat attctccacc atcgtcttct ccgccaaaac caagatccaa cgacggtaca
    13861 ccaaggtgct gcaaaaaaga ggagtagtcg gaaccactac caagtgcgcg caggtcaagt
    13921 gtgttggcct gcaacgcatc cttttttgct tttgcagttg cggcgttcgt ggctttatct
    13981 gctttccatc tttcgtatac agaaacattg gtttgaggat cggttaccgt tttcgagatc
    14041 tcatccacca atggctgcaa agcgtgcgac ccaccagcgc ccaaaaatcc tctgccgttg
    14101 gcgtccgtgt tcacatagat caccgctttt tgttgcagtt cttttgcgtg ttcctccgcg
    14161 aattcagttg atccgagcaa cgcctgttct tcgccatccc atgaacagta tacgatcgtc
    14221 cgtttcggcc tccaacctgt tttcagtaat tcgccgatcg cttttgcctc ctccagcatt
    14281 gcagcttgcc cgctaatcgg atcgtttgca ccattcaccc atgcgtcatg atgattgccg
    14341 cgcatcaccc actcatcggg gtattcggaa ccttttagcg ttgctaccac gtcgtagcac
    14401 ggaaccatgt tccagttgaa ttcaagcttc aaatgcactt tcgttttgcc tgcgccgatg
    14461 tgataagtaa ttggcagcgc tccctgccag ccaccaggaa ctacaggacc atccaatgct
    14521 tcgagcaatg gtttcgcatc gtggtaactg atgggtagca caggtatttt taaaagattc
    14581 ggtgcttcat tatgtgatgc gagccgttgt gcgttttctg ttgcaccaac tccgggagtt
    14641 aaaggatcac ctggatacac gggaatatcc atcacgctgc cgcgttgcac accaaattca
    14701 tttttgaaag cgcctttcgg gtaaacatct ccctggtagt agccgtcatc cattgggtcg
    14761 ctataaatga tgcagccgat agcaccgtgt tcctgggcaa cttttggttt tattccgcgc
    14821 cagctgtgtc cgtattttgc gatcacaatt ttgcccttta cgtcgacgcc gatttcagca
    14881 agcttatcat aatcgccagg caatccgtaa ttcacaaata cgagttcgcc cgtgacgtca
    14941 ccgtctgcgc tccatgcatt gtatgtaggc agttgatcgg gttgtcccga agttgcgtct
    15001 tcttttagcg ccggttcttt cagcaaggcc ttgtaaactg tcggctctgt catttgaagc
    15061 agtcttgttt ttggcgtcgg aaatagtaca gtgaaagttt caatatgcgc gtcaaaacca
    15121 taacttttgt aacggtttaa aatcgtatct gcaacttctt tgctaccggg agaaccaaga
    15181 ttgtgcggct tcgacgaaag ttgtttgatg gtagatccga tgtgcgctgc gtttagctga
    15241 tcgtcgaatt tctgttccgt ttgtaattga agagccacat cgtttccgga gaaacccgta
    15301 atggtttgcg ttctcgcagc cagcgaaact aacaatgcgg gcaacaaaaa aaatttattc
    15361 atgaacaacg ggagttaagg gcatgaagat aagtgaaagg aaaatttcaa caacatgacg
    15421 gcgattaacc ggctgacctt attgagtcag cgatgaaaga aataaatatt cgcggatttc
    15481 ataagtgaaa tgaaaaaaca aaaatgcaaa aggaagcccg accttaacgg ccgggctcaa
    15541 aaattagtaa aagaattgct ctgatactat ctgcccgttt ttcacttgat acaacatcaa
    15601 ctggttgatc tgtatccttc cgattccgtg cacagtaata tcaacttctc tcccaacgac
    15661 aaaatggttc cctgcaatga ttggcggtgt tgtgtatcgt ttatgagccg cctctatccg
    15721 ccggacccag tcttcgcctt tctttctgac agcggctttt ccttctgcat tgtgcaagtg
    15781 cagggcctcg acgggttcta tacttctcac atcgtccgca aaaagctcat cctggatatc
    15841 gaaccatttc tcctgttgtg caagctcatt gaatcgtgct gcaacttccg tggttgtcat
    15901 ttctcgatta acaggctgcg tttctgtatt gtgatcaggc tgccctttac ccgtagttat
    15961 caaaggcaat aaactttcac ggagataata actccaggca tttgagcatg catcgaaaca
    16021 ttcggtttgc tgcgtcagtc cctcgtgcgt gaagcggatc tgcgtttttc ctttgtcttc
    16081 gctgatgtcg aaattaattt tcgtgcccgt ccattcagtc ttgtcattcg taaacgccaa
    16141 ataactgtcc tcaacaagcc aaacaacttt tttgtttggg atcacatcca ccaacttttg
    16201 tttagaaaaa tgaatgtctt tatgacgata tgtaaattcg tcattcaatt cattggtatc
    16261 accttcaact gcatcggacc accatccgcg gacattgtta atcgcgttaa atgcctcttc
    16321 cggagtttga tctacgacga tgctggttgt gaaatttgat gttttcattt tttatcaatt
    16381 ttaattacac ggaaattttt tccgcaaacc tatgatctga tttccaccgg atcggggtgt
    16441 aaaatagact ttataacggg ttgatttgga catgatattt ttctaccttt gaaaaaaacc
    16501 agtatgaaac atctcacgat tttggttccc gatggacaaa ataatttaag cagtatagtg
    16561 ggcgcctaca aaatcttttc acgcgcaaac aaatacagaa aagagcaagg cggccgtgaa
    16621 ttatttaaga ttgaactagc cggcatatca aaaagagtgg atttttacga tagcttgttc
    16681 agcgttatgc cgcacacgca aatttcggcc atcaagaaaa cggacctggt catcattcct
    16741 tccctgaatc ataactatca aaaaacggta cgaaaaaaca ggcctgtgat cgattggatc
    16801 gaaaaacaat ataaggaagg cgccgaaatt gcgagcattt gtacgggcgc ttttttgctt
    16861 gcgtcgtcag gcttgttgga tggtaaaaca tgctctacgc attggtcagc cgctgataat
    16921 ttccggacca tgtttccacg agtcaaattg caaaccgatc aactgatcac tgatgaaaac
    16981 ggtatttata caaacggggg cgcatactct ttcctcaact tgctgatcta tcttgtcgaa
    17041 aaatattacg gcaggccaac cgcaatcttt tgttccaagg tgttccagat agacataaac
    17101 cgccaaagcc agtcggcatt cataatattc agcggtcaga aattacatgg agatgatgta
    17161 gtaaaaaaag ctcaaaccta tattgaagat catgtggatg aaaaaatttc cgttgaacat
    17221 ttatcatcgc ggtttgcggt aggcagacgc aacttcgatc gaaggtttat aaaagcaacc
    17281 ggcaacacac cggtggagta tttgcaaagg gtaaggattg aatcagcgaa gaaagcgttt
    17341 gaggcaagtc ggaagacagt gaacgaggtg atgtatgaag ttgggtattc agatccgaag
    17401 gcatttcgcg aagtctttag aaaatgtacg ggtgtatcac cgttggaata ccggagcaaa
    17461 tacaacaaag acgcactcgt ttagaaggaa ccctgtttta attcgacaga gcattgttca
    17521 ttaaatgtat ggctatatct tttagatgag caggtacata caattctatt tcaccaaaag
    17581 ataggtagct gctgtcgagc ttattcagaa taacagcgcg aatattattt tcttcaagca
    17641 tgcctttgag gatgtttgct tccgcataat ttttagtgct gtataatttg aaccatcctt
    17701 ccataactgc aatcgcggtg tttcgttcat ggattacgcg cgagcagaaa aagcatgcct
    17761 tcagcaagcg cggataaaag caacaggaag cttaacaggt tttgaaacct ttttgctttt
    17821 gcggtttttt cacttcgtga tttataaatc gcataccggc tgaaataaaa ccagtacaca
    17881 tatttttgtc gcgaggtaga tgcgaaaaaa tgaaacgttt tgaaaatgac tattagcacc
    17941 agtaataccg agttaatata aaatagtgtg ttgaaaaaat acatgatcgt ttatttcaag
    18001 gttaacaagg taatgtgcgg caaagctatg gttcccggcg tattttctaa tggcagattg
    18061 agttttgaca tctatcagag agctctcatc cgccaaaagg ctttcgacgt ttgtcgtgat
    18121 atttgcgaat ttggaaggat ggcatctgct tagtattttg cagcttcgca aaagcccagg
    18181 tggtgaaatt ggtagacacg ctactttgag gtggtagtgc cttaaccggc gtgctggttc
    18241 gaatccagtc ttgggcacca gcctttccgt acgcgtagcg ggagggcttt tttatttcta
    18301 cgccatttaa actcgcctgc acaaccgcat caattgaaga actttctgga cagggactaa
    18361 acctttttaa acttttagcc ggtgcttgga aacccgatta aggtttgtat tttgctttct
    18421 caacaacgat tgtcggagtc aacaagtttc tgatttttca aataccatag tttcgtcttt
    18481 aacaaacaaa aactctttgg aaataaagtt tgaaaaatta attgaatgat gtgccggcga
    18541 tctggtatcc gcagctgtag gaataaatga caacagatta ctaaagcaac gtttcatttt
    18601 ttactttgat tttctaccgc catattccat ttctgaaagc agtcgcaata catagtttga
    18661 ccgcttttgg agggccgcaa ggtcatttcg gaatgatgct taaaaatttc gtacacagaa
    18721 ggcatgacct gacggaacaa gagctattag agtataatgc tttttgccaa atgctgccgg
    18781 gcgcctcgtc gactcaaacc ttaacgctga ttggttacaa acgcggcggc ataccgctgg
    18841 caattatcac cctgctgata tggataacgc cggcaagcat cctgatgggt ttgttttcat
    18901 ttctgttggg ttatatcagc gacagaaaca ccgtggctga tctctttaat ttcattcagc
    18961 cgatgtcggt aggatttatt gcgttctctg cgtacagaat gtctaaaata gcgatcacaa
    19021 atacgatcac ggttgtgatc atgagcgtcg cagcgatatt aactttcgtc atattcaaaa
    19081 cgccatggat ctttccaagc attatcatcg ttgcaggcat agcaactaat ttcagcagca
    19141 agcgcattcc acaaaaaggc attcctccta aaaaaattaa atgggccaat atcctgatct
    19201 tttttgccgt gtttgcgcta gccggttatg tcagcgaaac agccagaaaa gaaaattgga
    19261 aagacagggg gccctataac ctcttcgaaa atttttacag gtttggaagc ctggtctttg
    19321 gcggaggcga tgtgttgata cccatgatgt accagcaata tgtagtgaga ccgaccactg
    19381 aaagagctga gaaagtgaac ccgggagcat tacgaattga taaggaggat tttctaaccg
    19441 gatcaggtat ggtaagagca ataccaggac cggttttttc gatcggtgca tttgttggag
    19501 gaattgcttt tgacgctgac ggtccaaaaa tgcagataat cggttgtata gtcggggcga
    19561 tcgccctgtt tcttccaagc cttttgttgg tattattttt cttcccggtt tggcataact
    19621 tgaaaagata tgcagtgatc tacaggtcgc tggaaggcat caatgcgtct gtagtcggga
    19681 taatgatcgg ctcgacctta ttcttgctca aagacatctc ggtagatatc agcacaggtg
    19741 cggttacacc attcgcgaac attgtagtaa tagcaggaac gttccttctt ttatcgttta
    19801 caagaatacg tcctcaattc attccgctgc tttgccttgc attgggagtg tgtttgaatt
    19861 attatcacct gtaataattg ttggtaacaa tctctttgag aaccacatcc gggactaagt
    19921 accgcgccga ttttccattt cttatcagct ccctgatttt tgttgatgaa atgtcaagtt
    19981 gagccgcgct aagaacttct attcccggtt ttgatgcgtc gaccgggtaa ccgggccgca
    20041 gatatacaat gatgttcgct tcctccagta acttctcatg cgatttccat ctgggcaagt
    20101 caagcaaatt atctgagccg attattaacc taaaacgatt ttccgggtac gtgtgttgca
    20161 gataatgaac cgtgtcaatc gtgtaagacg gcttaggtaa ttgaaactca acgtcagaaa
    20221 cgagaaaacg gtcatcatta tctaccgcca gcccaaccag cttcaagcgc tgtgtcgcat
    20281 caagtaaatg gcacgaatct ttaagcggat tctgaggcga aacaacaaac catatcttat
    20341 ttaaggatgt gtaatttaga acatggctcg cgatgatcag gtgaccagtg tggatcgggt
    20401 tgaatgagcc gaaaaataaa ccaatttcca tctttataga ttgacaatca gctacttaac
    20461 cgcatcgacg tatatgcaat ctgcctcgtt taatcgcaaa cttaaactgt atcccgcaac
    20521 acaaaccgag atagggtcgc ccaacggtgc aaatttttcg atataaatta tttcgcctgg
    20581 tataaatccc atttccatca atttaatcga gatttcatcc tgaccgaact ccttaattac
    20641 cgcctgttgc cccacccgca aatcagataa cttcatgcta tgcaattgat ttcgcaaaac
    20701 tatgtttacc tggctgattt aattttacga tttcagaagt aatggcatca gtttcatttt
    20761 attccgcgga cgtgtcaatt cccatcaagc acagagcgaa ggttcgaaaa ctaattattc
    20821 acctttttgc tgaagagcga actcctctcc aaaccttgag ttttatattc tgctccgata
    20881 aatacctgtt gcggctgaac aaaaaacact tgaaccacga ttattatact gatgtaataa
    20941 cgttcgatat ctcaaacccc tcggatcaag tcgtgggaga gatttacctc agtactgaaa
    21001 gaatcaaaga aaacgctaaa gcttacaacg aaacatacga gaaagaactt ttacgtgtta
    21061 tgattcacgg cgccctgcat ctgtgcgggt ataaggacaa aacaacagta gcggagaaga
    21121 agatgcgcgt aaaggaagag tattatttgc aactgtttag aaaacgtttc acgtgaagca
    21181 ttggctgatt ttcgtttttg ttttggtagg gcagtttggt tattcccaaa aaatgctgct
    21241 gttcaaagac gcgataattc ccacacccca cattgatcga caagttagaa gttggattga
    21301 acgtcagcct gcttttgacg agctctcgtc caccgagcag aatttttatt actgggttaa
    21361 ttacagtcgc gcaaacccgc gtcgcttttt agacagtgtc gtgataccca ttaccgaagt
    21421 atacccacaa ctcaaaggag aatattttga aagtctgcgc agtgaactga tggccgtcga
    21481 ttcgttgccg atgcttgtgc taaatggcgg cctaatacgg ctcgcaaaga atcacgccat
    21541 cgatattacg tcgcacgatg caaagccttc tcataattcc acgaacggcg atacattttc
    21601 ggatcggttt cggaaggaaa ag
//
LOCUS       DASQJI010000533         3555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_64602,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000533 DASQJI010000000
VERSION     DASQJI010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64602"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VEV83_14510"
     CDS             <1..503
                     /locus_tag="VEV83_14510"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46386.1"
                     /translation="KLIRQTLEFSEKNEITLKEELDYLETYLKLEQERFENKFTFNIR
                     LPQDFEDGNFYLPPLILQPIIENAVRHGVRGRNDKAGLIEIEAQNYNGCVLISIKDNG
                     PGIKHSQQSATAASLSHHSMGMRLVEERIKVFNDFGEKKIVMQADEVYTSGPYHGTFV
                     KIEIPV"
     gene            505..1242
                     /locus_tag="VEV83_14515"
     CDS             505..1242
                     /locus_tag="VEV83_14515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK46387.1"
                     /translation="MRTLIVEDEPKNVRILRKFLTDYFPELNVVGEAADVQKAKEKYF
                     TLEPELMFLDVQLENGNVFDFLDKVMPVSCEIIFITAYDSYALRAFKYSAVDYLLKPL
                     NIEELRLAIKKAKQKIGQNDLNVQLKQLIENFNKSPLNKIALPVDSEIRFVDVNEIMY
                     CNARGPYTCIHTSFNKTLMTSRTIGEYEDLLPKEFFFRVHNSFLINMRFIARYIKGRG
                     GVLEMQDGTKIEVATRRKEEFLSRFSR"
     gene            complement(1551..2174)
                     /locus_tag="VEV83_14520"
     CDS             complement(1551..2174)
                     /locus_tag="VEV83_14520"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK46388.1"
                     /translation="MKLVRYLSLFILIMITAHVHAQKGQLRFSLQYSYALPLGDFKTD
                     VIGDASPRGVTGDFLFGVSNKVSLGVGLGYQDFYQKYPRSLYKTGNNEVTSAVLSNSV
                     QIMPVLAKAEIHPMGGSHSPVQPYVSLGAGVGITTFTQYLGEFGGSDYTGKLMLQGGA
                     GIAIPFGSASNSGFRLGANYNLVNYDKNGFGNFNNLNLQAGLYFPLR"
     gene            complement(2187..2819)
                     /locus_tag="VEV83_14525"
     CDS             complement(2187..2819)
                     /locus_tag="VEV83_14525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HYK46389.1"
                     /translation="MKARPSLLAVYSVCAALLFGCTKDPLKNLNEEESRIYITNSDST
                     VDFSSFKTYSISDSVDVLDNNRSFKDLTPLDQAYIDAVNKYMQQRGYELVNKNANPEI
                     GINVNRIYSTSSGYYSYTDYWDYYDGYWDPYYWGYGGYGYYVPSSYGIYQITEGAMSI
                     DMLDLRDAANKGKIDVIWNGLIRGEGIFSTGNADAIVKALFDQSTYLQTH"
     gene            complement(3363..>3555)
                     /locus_tag="VEV83_14530"
     CDS             complement(3363..>3555)
                     /locus_tag="VEV83_14530"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HYK46390.1"
                     /translation="LCIFFFNLKTIIMRSILYIIAVILVIGWLLGFFVYSATGLIHIL
                     LVLAVISLLLALIGGRGTP"
BASE COUNT         1098 a          747 c          739 g          971 t
ORIGIN      
        1 caaaattgat ccggcaaacg ctcgagttct ccgagaaaaa cgaaataact cttaaagagg
       61 agcttgatta tcttgaaact tacctaaaac ttgaacaaga acggttcgaa aataagttca
      121 cgtttaatat tcgtctgcca caggattttg aagacggaaa tttttatttg ccgccactca
      181 ttctgcaacc gatcattgaa aatgccgtcc ggcatggtgt gcggggacga aacgataagg
      241 caggccttat cgaaatagaa gcgcaaaatt ataatggatg tgttctgatc tctataaaag
      301 acaacgggcc gggtattaag cactcgcaac aatctgcaac agcggcgtct ctaagccacc
      361 attccatggg aatgcgtttg gttgaagaac gaataaaagt ttttaatgac tttggtgaga
      421 aaaaaattgt gatgcaagcc gatgaagtat acacttccgg accgtatcac ggaactttcg
      481 taaaaatcga aatccctgta taacatgcga acccttatcg tagaagacga acccaagaat
      541 gtaagaattc ttagaaaatt tttgaccgac tattttccgg aactcaatgt ggtaggcgag
      601 gcagctgatg tgcaaaaagc aaaagaaaaa tattttacac ttgagcctga actgatgttc
      661 ctggatgttc aactggaaaa cggtaacgtc tttgactttc ttgacaaggt aatgcctgtc
      721 tcgtgtgaaa ttatttttat tactgcctat gattcatacg cgctcagagc gtttaaatat
      781 agcgcagtcg attacctttt aaaaccactc aacatagaag agctaaggct tgcaataaaa
      841 aaggcgaaac aaaagatcgg tcagaatgat ctgaacgtgc aactgaaaca gctgatcgaa
      901 aatttcaaca aatcgcctct aaataagatc gcactgccgg tagacagtga aatacgtttc
      961 gttgacgtaa atgaaataat gtattgtaat gccaggggtc catacacatg catccatacc
     1021 agttttaata agacgctcat gacgtcgcga accattggtg agtacgagga cttactgcct
     1081 aaagaatttt tctttagggt gcataactcg tttttgataa acatgcgctt tatagccagg
     1141 tatataaaag gaaggggagg cgttttggaa atgcaggatg gtacaaagat cgaggttgca
     1201 acacgcagaa aagaggaatt tctgtcgagg tttagccgat aatgtcgcaa ctattatgac
     1261 cgacgcacgc ttaatgctga attctacaca ctcaagaatt tctttcgaac atgtaaaaat
     1321 ctcaaaatat ttttacaatg acccgcagca aaactaactg caaccgcatt tacgcgttta
     1381 gatttgccgg cagtcaaaat aaccttcaag attttagtta taagtatttt caaccctaag
     1441 ctgcaaagcc gcctcaaatt tttgggcggc tttttattga aacaaaacac ggtacacaaa
     1501 aaaggctgct ctcttttagg gcggccttta gtaagctgga tgaacctctt ctaacgaagc
     1561 ggaaaatata aaccggcttg caaattcaaa ttattaaagt ttccaaagcc attcttatca
     1621 tagttgacga ggttgtaatt cgcgccgaga cgaaagccgg aattgctcgc acttccaaaa
     1681 ggaatcgcta taccagcgcc gccctgcaac atcagtttgc ctgtataatc gctgccgcca
     1741 aactcgccca ggtattgtgt gaaggtggtg atacccacac ctgctcccaa tgaaacataa
     1801 ggttgaaccg gtgagtggct tccgcccatc ggatgaattt ccgcctttgc cagcaccggc
     1861 attatttgca ctgaattgct gagcactgca gaggtgacct cgttgttgcc cgtcttatac
     1921 aacgaccttg gatatttttg gtaaaaatcc tggtaaccca ggccgactcc taatgatacc
     1981 ttattgctaa cgccgaataa aaaatctcct gtaaccccgc gcggcgacgc atcaccgata
     2041 acgtctgttt tgaagtcgcc taaagggagg gcgtaactgt attgcaggct aaatctcaat
     2101 tggccttttt gcgcatgtac atgagcagta atcatgatga gtatgaaaag gctcaaatat
     2161 cttacgagtt tcatgtgaat tctggtttag tgggtttgca aatatgttga ttgatcaaac
     2221 aacgccttaa cgatcgcatc cgcgttgccg gtgctgaaaa tgccttcgcc gcgaataagc
     2281 ccgttccaaa taacatctat ttttccttta ttcgctgcgt ccctgagatc gagcatgtca
     2341 atactcatcg ctccttcagt tatttgatat attccataac tgctgggaac gtagtaccca
     2401 tagcctccat atccccagta ataaggatcc caataaccgt cataatagtc ccaataatcc
     2461 gtataactgt aataaccgct gctggtacta taaattctgt ttacgttgat accaatttcc
     2521 gggtttgcat ttttgttcac cagttcatat ccgcgttgct gcatatactt gttcaccgca
     2581 tcgatgtatg cctggtcaag tggtgtaaga tctttaaagg aacggttgtt gtcaagcacg
     2641 tcaacagaat ccgagatact gtacgttttg aagcttgaaa agtcaacagt ggaatcgctg
     2701 ttcgtgatgt aaattcttga ttcttcttcg ttcagattct ttagcggatc cttggtgcaa
     2761 ccaaacaaca gcgccgcaca cacagaatag actgcgagca gggagggtct tgctttcata
     2821 aattcttagc ttgtaattaa tcttaagttt aatatgcgta gatagagtta cccgaacctt
     2881 aaaagtttaa tccagaatta tttttttcaa atttttttga aaaacacaac cttagaaaac
     2941 tgaggaccga taaaaatatt tctagtaaaa catcgttgcg atctctttca cggtttgaaa
     3001 aaaatattac accaggtggc agttattcct ggttggtgct cgagtgaatt tagttgattt
     3061 aggcaaagtt ttagatggtc gtttaacaaa taaaacgagc atccgacgcc gaagcacgaa
     3121 cgacgtcgcc acgcattttt taggaccgca gtcgctttga caggggagcc gtcaaatcgt
     3181 ataatccaaa agtaccgtaa ctgtgaaggg atgaataaaa gtatgcccgg tttcttatca
     3241 attttttttc atgacagttc acgcccaaat tagcatagtc gctaaaatgc agcagaaatg
     3301 catcgtgccc gggctgttca aataaaagat ggcctgacgc gggtgtctaa aagggatgaa
     3361 tcctaaggtg ttccccttcc cccgatcaaa gcgagcaaca gggagatcac tgcaagaaca
     3421 agtaatatat ggatgagccc ggttgcacta tatacgaaga aaccgagcag ccatccaata
     3481 acaaggataa cggcgatgat atacaaaata cttctcatga tgattgtttt aagattaaaa
     3541 aaaaatatac aaagg
//
LOCUS       DASQJI010000534         2895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_986317,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000534 DASQJI010000000
VERSION     DASQJI010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986317"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1792
                     /locus_tag="VEV83_14535"
     CDS             <1..1792
                     /locus_tag="VEV83_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46391.1"
                     /translation="LETENQNSMPDNSSDNIFASLKGLIWSAFIGVVSFQILAPNIWD
                     YLHGSLGVGYKNAYWWFTWTYFLILPALFLIWTWWNMQSLRVCLPPFNNTEALSRHSK
                     FFIRAVRLFIVLQSLLTIGIFYFHIDKAGVTTIMIIYFVWSALLLFFCFAYCLGCIDY
                     YLYGADASPNSIFTDGFKNFFSYIFFKRKREKLLPDAAQRKQQKQFYRSFVQFACPAI
                     IMLFLLFAVGFFYLNNWEASKSEKLSSKTAGDRGFALLDLKETIDAATKEIVAVQESW
                     KQEQPAIDLSESLLRTPADHAILIDSVNGAGVDTAQAQADSAEQDTTVNPRTIAYARA
                     LNTLRKSLIQLLDTLPRSPTMGNIARDSTGEDSIKEQIDKFPIKAQIDSLNNKFKQLS
                     LPDSINAKDLVFLEMERAVLNELSKRTEVGAQSQLGYQLRSVQAKGMMLLLSLFFTIL
                     ALYIFLKMNEDIRSVQLEGMEFTKRRGDETDENKLSEMKASVADASKLSVTLWMFLTI
                     TAWLLIPIFKMVKDEEIDIRSPYKAVTFSNAENNVTSAVTGSKSKADTSYIQLGGSVS
                     IVDTAVRHDVEEIKKKLNEIQEQVKPINNY"
     gene            1802..2710
                     /locus_tag="VEV83_14540"
     CDS             1802..2710
                     /locus_tag="VEV83_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46392.1"
                     /translation="MKKILLFSVLFLILQSSYGQTSGNAVFIRNLKWWDTTGLLKSFD
                     NDLDALSKFIDSTNNVLKRYKIQFDKKRSDSSTSLGNECDRDPLLITEYIDRIHAESF
                     YIKGEKSTDSSFLYYYTNKELNDYVESLMAVKREMDYLCKGSSQSAFPNLNAFSSNNF
                     LNAYYYASESRSLLLAAMDNLERHYTLGGVADNISRVADSIDLRSVTISETSGITKQN
                     VDLANNTLHLVDSVGMHSDTLLTNSFKPYQTLKNKKQLDGSPTDKISTASNTILIDSR
                     KNWWWRTLVGGVIGGLVAGLVVTAAQ"
     gene            complement(2758..>2895)
                     /locus_tag="VEV83_14545"
     CDS             complement(2758..>2895)
                     /locus_tag="VEV83_14545"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46393.1"
                     /translation="TKPTGEGTGLGLSLSYDIIKAHGGEIKVATKEGESTIFTIELPV
                     E"
BASE COUNT          861 a          602 c          637 g          795 t
ORIGIN      
        1 attagaaaca gaaaaccaaa acagtatgcc tgataattcg agcgacaaca tatttgccag
       61 cctgaaaggc cttatatgga gtgcgtttat tggtgttgta tcgtttcaga tcttagctcc
      121 taacatctgg gactatttgc acggttctct tggagtcggc tacaaaaatg cctactggtg
      181 gtttacctgg acttactttt tgatcttacc ggcactcttt ctcatatgga cctggtggaa
      241 tatgcagtcg ttgcgcgtat gccttcctcc ttttaacaac accgaagccc tcagccgcca
      301 cagcaaattt ttcataaggg cggtaagact atttatcgtg ttacaatcgc ttctgacgat
      361 cggtattttt tattttcata ttgacaaggc tggtgttaca accatcatga taatttattt
      421 cgtctggagc gctttgcttt tatttttctg ttttgcatat tgccttggtt gtattgacta
      481 ttatttatat ggcgccgacg caagcccgaa ctcaatattc acagacggat ttaagaattt
      541 ttttagctac atttttttta aacggaaacg cgaaaaactt ctgcctgatg ctgcccagcg
      601 aaaacaacaa aaacaatttt acagaagctt tgtccagttt gcctgcccgg cgatcatcat
      661 gctttttctg ctttttgcgg ttgggttttt ttatttaaac aattgggagg cgagcaagag
      721 cgaaaagctg tcgtcaaaaa cagcaggcga tcgtggcttt gctctattgg atctcaagga
      781 aacaattgac gccgcaacaa aggaaattgt tgccgtacaa gagtcttgga aacaggagca
      841 acctgccatt gatctcagtg aatctttgct ccggacgcca gcggaccacg caatactgat
      901 cgactcggtg aacggagcag gcgtagatac agcacaagcg caggctgatt ctgcagaaca
      961 ggataccacg gttaatcccc gcactatagc gtacgcgagg gcgttaaaca ccctccggaa
     1021 atctttaatt caattattgg atacgcttcc gaggtctcca acgatgggta acattgcgcg
     1081 ggatagcact ggcgaagatt cgattaagga acaaattgat aagttcccga tcaaagcgca
     1141 aatcgattcg ctcaataata aatttaaaca gctctcgctg ccagattcta ttaacgcgaa
     1201 ggacctcgtg tttttggaaa tggagcgcgc agttttgaat gaactatcaa aaagaacaga
     1261 agtaggcgcc caatcgcaat tgggctatca attgcgaagt gtgcaggcaa aaggaatgat
     1321 gttgctgctg agtttgttct ttaccattct cgcactctat atttttctca agatgaacga
     1381 ggatatacgc agcgtacaac tggagggaat ggagttcact aaaagacgcg gtgatgaaac
     1441 tgatgaaaat aagctgtcag aaatgaaggc gagtgtcgcc gatgcatcaa aactatccgt
     1501 aacgctttgg atgtttttga cgataacagc atggctgctt atcccgatct tcaaaatggt
     1561 gaaagacgaa gagatcgaca taagatcgcc ttacaaggcg gtaacatttt cgaatgccga
     1621 aaacaatgtt acatcggcgg tcactggctc aaaaagtaag gcggacacct cttacataca
     1681 actgggaggt tcagtttcaa tcgttgacac cgcagtcagg cacgacgtgg aggagataaa
     1741 aaagaaactc aacgagatcc aggaacaggt taagccgatc aacaattatt aatctcacac
     1801 gatgaaaaaa atattgcttt tttcagtgct ttttttgata ctgcaaagca gttacggtca
     1861 aacgtccggg aatgcggttt ttataagaaa tttgaagtgg tgggacacaa ccgggctcct
     1921 gaaaagtttt gataatgatc ttgacgctct aagcaaattt attgacagca cgaacaatgt
     1981 tttaaaaaga tacaaaattc agtttgataa aaaaagaagt gattcctcga ctagcttagg
     2041 caatgaatgt gacagggatc ccttgctgat tacagaatat attgacagaa ttcacgcgga
     2101 gtcattttat ataaaaggtg agaaatcaac tgattcttcc tttctctatt attacaccaa
     2161 taaagaactg aacgattatg tggaaagtct gatggccgta aaaagagaaa tggattattt
     2221 atgcaagggc agtagccaaa gcgcgtttcc aaacttaaac gccttcagca gcaataactt
     2281 cttgaacgct tattattatg cgtcagaaag caggtctctg ttgctagcgg ctatggataa
     2341 cctggaaaga cactatacgc tgggcggcgt tgcggacaat atttccaggg tagctgattc
     2401 cattgacctg agaagtgtaa caattagcga aacgagcggc atcacgaaac aaaacgttga
     2461 ccttgcaaat aacaccctgc acttagtgga ttctgttggc atgcattccg atacgctcct
     2521 tacaaattca ttcaaaccat atcagacact caaaaacaaa aaacagctag atggttctcc
     2581 gaccgataaa ataagcactg cttcaaatac tattctgata gacagcagga aaaattggtg
     2641 gtggcgcact ttggttgggg gtgtgattgg cggtctcgtc gccggccttg ttgttacggc
     2701 agctcaataa agatgtcttt tgattgcaaa caagaattca gtcaaaaaaa atagtcatca
     2761 ctcaactggt agttcgattg taaatatagt actctcacct tctttggttg ctactttgat
     2821 ctcaccgccg tgcgccttga taatatcata gctcaggctc aaacctaaac cggttccttc
     2881 gccggtcggc ttggt
//
LOCUS       DASQJI010000535         2598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2828829,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000535 DASQJI010000000
VERSION     DASQJI010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2828829"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            415..>2598
                     /locus_tag="VEV83_14550"
     CDS             415..>2598
                     /locus_tag="VEV83_14550"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46394.1"
                     /translation="MFRNYLKTALRNLQRNKTYALINTLGLAVGIAACLLIFLVVQFE
                     TSFDDFHPLRNSIYRVGTEFHNQDGVSYSDGVSFPTGRALRVDFPQIKQVASVFRNGG
                     QITVEDGTTHLKKIQEDNFYYAEPEFFSMFNFGWLAGDAKTALTDPNSAVLTQATAEK
                     FFGDWRSAIGKTIKYENKTLYTVKGILKNIPHNSDFPFSVVVGYSALQNTYIKNNFED
                     WVSTFGGAYTFVVLPPDLPVAKFNNELKAFAKKHKPAEYASDSYIAQPLTEIHYDERF
                     GNYNEHTFSHSLIKALSLIGLFLIVIACVNFINLATAQAVNRSKEVGVRKVLGSNRSQ
                     LAFQFLGETAIIVVVAIATAIVIAVSVLPLLNQLLETQMNMSFIANPTLILFVLALAI
                     VVTLLSGIYPAIILSGFSPITALKSKITSKMIGGISLRRALVILQFAIAHVLIIGMFI
                     VVSQMNFFKNASLGFDKAAIINVPIPGDSVSHKKIDYLRNQLLDNTDIRSVSFSFASP
                     SSDGNWNSDFNFDHSSKNTDFSANLKWADPDYFKTYNLHFVAGHAYSPSDTVREFVVN
                     ETLIHKLGITNPQDAIGKEISFWHGEKVANIVGVVRDFNSYSLRQPMAPVVLSTWKDV
                     YQTINIKINPGAEKKVLPYVEKLWNSQFPDYVYEYKFLDQTIENFYKQENQLSQLYKI
                     FAGIAIFISCLGLYGLVSFMAVQRTKEVGIRKVLGASARHIVFLLS"
BASE COUNT          732 a          573 c          585 g          708 t
ORIGIN      
        1 aaaggaagaa aagattcgct aaaccccgag ggttctcaaa accctcgggg tttctatcaa
       61 cgttttatcc ccgcatccaa cttgaatccc tcaccactta tcccgtctcc gaacaaattc
      121 gtacgagcgg tgttcgtttc cgaacacttt tgcggcttgt agtttctgaa atgcttatcc
      181 agaaagggtt tcagccttgg catgcccatt gagacgaaac acgcaggtgt tctggttggc
      241 ttatggttta ttggttaatt aggttattgg gataacggtt gattcgaatt ggattatcgg
      301 gtgaaaagga cgaaggaagc aatcacgatc caattcacaa actcacgatt gaccagtaac
      361 cattcgaaac gacaggcagc gacgtcaagc tcaaactcac aataatgcca cgctatgttt
      421 agaaattatt tgaagactgc tcttagaaat ctgcagcgta ataaaactta cgctttaata
      481 aatacgctgg gattagcggt gggcattgct gcttgtttat tgatcttcct ggttgtgcag
      541 ttcgaaacca gcttcgatga ttttcatccg ctgcgaaaca gcatttatcg cgtcggcaca
      601 gaatttcata accaggacgg cgttagttat tctgacggcg tatcatttcc cacgggccgc
      661 gcccttcgtg tggattttcc tcaaataaaa caagtagcgt ccgtgtttag gaacggcgga
      721 caaataacgg tcgaagacgg gactacacac ttgaaaaaga tccaggagga taatttttat
      781 tatgcggagc cagagttctt cagcatgttc aattttggct ggcttgccgg tgatgcaaag
      841 acagcgctca ctgatccaaa cagcgcagtg ctcacacaag caactgctga aaaatttttt
      901 ggggactgga gatcagcgat cggaaaaacg atcaagtacg agaacaaaac tttgtacacg
      961 gttaaaggca ttcttaaaaa catacctcat aactccgatt ttccatttag cgtggtcgtt
     1021 ggatattctg cacttcaaaa cacatacata aaaaacaatt ttgaggattg ggtaagcaca
     1081 ttcggcggcg cctacacctt tgttgtgctg cctcctgacc tgcctgtcgc aaaatttaat
     1141 aacgaattaa aagcttttgc aaaaaagcac aaaccggcag aatatgcgtc agatagttac
     1201 attgcgcaac ccttgacgga gattcattat gatgaacgtt tcggaaacta taacgagcat
     1261 acgttcagtc attcgctgat aaaagcattg tcgctgatag gactgtttct catcgtgatc
     1321 gcctgtgtga actttatcaa tcttgcaacc gcgcaggcag tgaaccgctc aaaagaagtt
     1381 ggggtgagaa aagtgctggg aagtaaccgg agccaactcg cgttccaatt tctcggagaa
     1441 accgcgataa tagttgtggt tgctatcgca actgcgatcg tgatcgcggt gtcggttttg
     1501 ccattgctca accagttgct cgaaacgcaa atgaatatga gctttatcgc gaacccaaca
     1561 ctcatcctgt tcgtacttgc acttgcaata gttgtaacat tactgtcagg catttatcct
     1621 gctatcatct tatccggctt tagtccgatc actgcgctga aaagtaagat aacgtcgaaa
     1681 atgataggcg gaatttcgct tcggcgagcg ctggtgatcc tgcagtttgc gatcgcacac
     1741 gtcctcatca tcggaatgtt catagtcgta agtcaaatga acttcttcaa aaatgcctca
     1801 cttggttttg ataaagctgc catcattaat gtgccgattc ccggcgacag cgttagccat
     1861 aagaagattg attatctgcg taaccaactg cttgataata cggacatcag gagtgtgagc
     1921 tttagttttg caagcccttc ttccgacggc aactggaaca gcgatttcaa tttcgatcac
     1981 tcatcaaaaa atacagactt cagtgccaat cttaagtggg ctgatccaga ttatttcaag
     2041 acatataatc tccatttcgt ggccggtcat gcatacagtc caagcgatac cgtgcgggaa
     2101 tttgtggtaa atgagaccct tattcataaa ctcggcatca cgaatccgca ggacgcaatc
     2161 ggcaaggaga tcagtttttg gcacggagaa aaagtcgcca acatcgttgg tgttgtacgc
     2221 gattttaatt cttattcgct gcgacaacca atggcgcctg ttgtgctgag tacatggaag
     2281 gatgtttatc aaaccatcaa cataaaaata aatccgggcg cagaaaaaaa ggtgcttccg
     2341 tacgtagaaa aattatggaa cagccagttc ccggattacg tatacgagta caagttcctc
     2401 gaccaaacta ttgagaattt ttacaagcag gaaaaccagc tatcgcagtt gtacaaaatt
     2461 tttgcaggta ttgcaatttt tatcagttgc ctgggcttat acggacttgt ttcgttcatg
     2521 gcggtgcaac gtacaaagga agttggtatt cgtaaggtgc ttggcgcgtc ggcacggcac
     2581 atcgtttttt tgttgtcg
//
LOCUS       DASQJI010000536        17172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1600032,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000536 DASQJI010000000
VERSION     DASQJI010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17172
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600032"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VEV83_14555"
     CDS             complement(<1..1097)
                     /locus_tag="VEV83_14555"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HYK46395.1"
                     /translation="MEIINPNKERRARRKSSVDLSTLVYGKIPPQARDLEEAVLGAIM
                     LEKSAFDTIVEILKPECFYVDAHQLIFKSFQSLAQKSMPIDMLTVVEELKTKEELDVI
                     GGPYYITRLTNAVVSTANIEAHARIILQKFIQRELIRISGEIIGDAYEDSTDVFDLLD
                     DSETKMFNITNHYLKKNYEDIGNALAKAINRIDELRNKKEDISGVPSGFSSLDRVTYG
                     WQPTDLIVLAARPSVGKTALALNLVRNAALHPTKPTGVGIFSLEMSASQLVQRILSAE
                     SEIALEKIARGKLEDYEYQQLHTKGIKRLEQAPIFIDDTAALNIFEFRAKARRLVNKH
                     HVGLIVIDYLQLMSGTGDRGANREQEISNISR"
     gene            1497..3938
                     /gene="pheT"
                     /locus_tag="VEV83_14560"
     CDS             1497..3938
                     /gene="pheT"
                     /locus_tag="VEV83_14560"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HYK46396.1"
                     /translation="MKISYKWLHEYLPVGESGLPEPIAPSQLSAILTSVGLEVEALEV
                     YENIKGSLAGLIVGKVLSCEQHPNADKLKVTTIDVGANEPLQIVCGAPNVANGQKVIV
                     APVGSTIHPVSGEPVMMKTAKIRGVESYGMICAEDEIGLGSNHSGIFILPVQAKIGSP
                     AADHFNVYTDWIYEIGLTPNRMEAMRHIGVARDVCAWLTHHTGHIVRPRLPFVELQQS
                     PTENSFHVQIENTKDCKRYSALTISGVTVNQSPDWLQNRLKSIGQRPINNIVDITNFV
                     LHETGQPLHAFDADEITSKTIVVTNLAEGTRFVTLDDTERKLSSRDLMICDTHRPVCI
                     AGVFGGAHSGVSDKTKNIFLESAWFSPSTVRQTSFRHGLRTEAAVHFEKGVDVSGTVR
                     ALARAGQLIEEIAGGNITGNIIDVYPSEEKKAQVVLKHDYLKKLSGKTYPIPVVKTIL
                     SALEFELVSETVDALEVAVPLSKMDITIPADVVEEIVRIDGLDSIEIPASITISPALE
                     DDPAGEKLKEKFSTLLTGIGFNEIITNSITNSKNFSEETLAGSVKLLNNLSADLDLLR
                     PSMLETGLEMIAYNINRKSHDLRFFEFGTTYKNLDDSYAEKQNFSFWLTCKNAGGDWK
                     HNSYMPDFFTAKGIVESLLRSVNVKDVQFAAPEIFEKGIFQTIYRGEHGLGMILQADP
                     AFLQRFDIRQPVVYGELNYEAVLKEAGKETITFREIPQFPTVERDLAVVLQRNIAYRS
                     IEKSLKNMSIPYLQQFHLFDIFESDKIGNDKKSLAINFSFLDAEKTLTDQDVEAVMQT
                     IVKKLETDFDAEVRK"
     gene            3951..4235
                     /locus_tag="VEV83_14565"
     CDS             3951..4235
                     /locus_tag="VEV83_14565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46397.1"
                     /translation="MEEMKAQIKELQLSVQALLKKLNNVQKENEHLKQLAAELQLGLT
                     EKENTMQSAQQKIDAKSLSTLYDEGEKKLLQQRIDVYLRDIEKCLSLLNA"
     gene            4238..4528
                     /locus_tag="VEV83_14570"
     CDS             4238..4528
                     /locus_tag="VEV83_14570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HYK46398.1"
                     /translation="MENLIPVNILIADRNYRLRIKPEDEEKLRKTVKLINEKIIEFKT
                     NFAGKDMQDYIAMVLIWLATEETPPIAMNLDPEEITGKLKNLQKIIEEALHS"
     gene            4634..4759
                     /locus_tag="VEV83_14575"
     CDS             4634..4759
                     /locus_tag="VEV83_14575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46399.1"
                     /translation="MKTKSNIIDHNHIAASESFGCSPILLISSGTDKRLALGYSG"
     gene            5034..6593
                     /gene="rny"
                     /locus_tag="VEV83_14580"
     CDS             5034..6593
                     /gene="rny"
                     /locus_tag="VEV83_14580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HYK46400.1"
                     /translation="MDVIAIITGIISLIAGIALGKVLFAKNTQKKLQDAETQAQQIIS
                     EAQLKAETTKKERILEAKEKFVQLKAEHDKEVLERNKKISDNENRVKQKEIIINQKEA
                     SLEKHIKENEAIKENLNRQLEVVAQKRNELEKHQEEHIKRLEKIAGLTADEAKSQLVE
                     SLKQEAQTQALVLQQEVIEDAKLRANKEARKIIIQSIQRTAAEQTIENTVTIFNLESD
                     EIKGQIIGREGRNIRTIEAATGVDLIVDDTPEAIILSSFDPLRREIARLSLQRLVADG
                     RIHPARIEEVVEKTRKQLEEQVVEIGERTVMELGIHGLHKELVRIVGKMRFRSSYGQN
                     LLMHSREVANLCATMAAELGLSPKLAKRAGLLHDIGKVPDEETELSHALLGGKLAEKY
                     GENPAVVNAIAAHHDEMEMQYIISPIVQSCDAISGARPGARREIMQQYLQRIKDLETL
                     AMSYTGVEKAYAIQAGRELRVIVEAEKVTDTDSDKLSFEIAQKIQNEMTYPGQIKVTV
                     IREKRAVNLAR"
     gene            6682..7032
                     /gene="rplS"
                     /locus_tag="VEV83_14585"
     CDS             6682..7032
                     /gene="rplS"
                     /locus_tag="VEV83_14585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HYK46401.1"
                     /translation="MNAAVQFVHDQLTGKKKHPRFKAGDNITVNYKIVEGGKERIQGF
                     RGDVLKIQGTGSTATFTVRKISDGIGVERVFPFFSPNVESIVLNKVGKVRRAKLYYLR
                     SRSGKSARIKEKRM"
     gene            7123..7356
                     /locus_tag="VEV83_14590"
     CDS             7123..7356
                     /locus_tag="VEV83_14590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HYK46402.1"
                     /translation="MSMPGGSEWILIILAVLILFGGRKIPEFMRGLGKGIREFNDAKN
                     NVRRELEDGMNEPPRQAPSANNKTQSTTTTSQP"
     gene            7381..8850
                     /gene="gatA"
                     /locus_tag="VEV83_14595"
     CDS             7381..8850
                     /gene="gatA"
                     /locus_tag="VEV83_14595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HYK46403.1"
                     /translation="MFSFSSIKDYQFNLLNGHTTCVEAVSHYLENIRRNAHLNAFLEV
                     YESEALERAAALDRERRDGKPPGKMHGVVIGLKDVIAFKGHKLSASSKVLENFRSIFN
                     ATVTEKLLREDAIIIGRQNCDEFAMGSSNENSAYGPVLNAADSSRVPGGSSGGSAVSV
                     MAGLCMISLGSDTGGSVRQPADFCGVVGLKPSYGRVSRYGLIAYGSSFDQLGVLARNV
                     DDAGITLEVIAGPDAYDSTVINSEFEYVNSNAPENSDRYTVGYFPATFEHPGLDPEIA
                     TIQKAFIAQLTAHDIAVKPIDFDLLDFIVPAYYILTTAEASSNLSRYDGIKFGTVACP
                     ETSDLTEQIKLTRSKGFGQEVKRRIMLGTFVLSEGYYEAYVSQAQKVRKLLLQKTKSV
                     FAEVDALLSPVSPFTAFKLGEKKSDPVEMFLADIYTVFANLTGIPAVSLPLFKHSNGM
                     PFGLQVMASQLNELNLLHLSKKLIGINRLNNQSNEPRFD"
     gene            8868..9989
                     /locus_tag="VEV83_14600"
     CDS             8868..9989
                     /locus_tag="VEV83_14600"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HYK46404.1"
                     /translation="MIKKRFGKVSLLTVKRLDRRVGVLTVFLLLFQFSSFCAGANPND
                     RTFLKDSSGTDTTGKILATDPVKDSSKLFASLLSPDEGKVSNFSVNPQAKSFVDDYIR
                     RHNRSLNNMKIWGKPYFNLYDHILSSYGVPVQLKYLSVIESSLSNNAISWAGAVGPWQ
                     IMEDAAREHGLKTGYYDDRLDYIKSTNAAAQILKELYSTYGDWLLVIAAYNCGTGNVN
                     QAIAKGRSRNFWEIQYYLPEETRNHVKKFIATHYFFEGDGSVVTMTASEAQNAVFSNA
                     VNKPADAYMELVASCATINIYGKYNSVVIANTLMMDITVFNQLNPNIDAELAKGGIYP
                     LRIPADKVSLFQAKKIEILKQSVELFLNQASVEPAAGTK"
     gene            complement(10090..10530)
                     /locus_tag="VEV83_14605"
     CDS             complement(10090..10530)
                     /locus_tag="VEV83_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46405.1"
                     /translation="MSSKSDKAKKSSNKPVEKKDVENASPKSKKQLEEEEEDDLDEQQ
                     EEVKDSLKKTAPKSKKNNEEAGDGEDDDSDVAEDEVDEWDKPEEEENWDPDFDEFDIP
                     RSKAKKAGKKESEEEEDDFKFDDDLKEFDLFNDSDFDDESEDDF"
     gene            complement(10592..11860)
                     /locus_tag="VEV83_14610"
     CDS             complement(10592..11860)
                     /locus_tag="VEV83_14610"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HYK46406.1"
                     /translation="MVDVILGLQWGDEGKGKIVDYFAPQYDIIARFQGGPNAGHTLYI
                     DDKRIVLHQIPSGIFHQNTINIIGNGVVLDPVTLKRECETVAAFGIDVRKNLFISERT
                     NLIVPTHRALDKASELQKGEGKIGSTLKGIGPSYMDKTGRNALRVGDITDKSFITQYI
                     KLRLKHQKLLDNFHFIEEISEWEEEFFEAVEFLRTLNIVSGEYFINEEITKGKKVLAE
                     GAQGSMLDIDFGTFPFVTSSNTISAGVCTGLGVAPQKIREVIGVTKAYCTRVGGGPFP
                     TELQDSVGEELRKIGNEFGATTGRPRRCGWIDLVALKYTVMLNGVTKVVMTKADVLDS
                     FEQLKVCVNYSIDGQETDRVPFQLMQVNMKPEYKSFNGWNIDTTAIKNSNNLPLEMQQ
                     YISFINQYIKAPVSYVSNGPQRDQVIIVAP"
     gene            complement(11926..12297)
                     /locus_tag="VEV83_14615"
     CDS             complement(11926..12297)
                     /locus_tag="VEV83_14615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HYK46407.1"
                     /translation="MLLTQDNKLKKLIVIGDRILIRPSKPDEQTASGLYLPPGVQEKE
                     KVQQGYVIKTGPGYAIPLPVENEAWKNEEEQVKYVPLQAKEGDLAIFLLSGATEVIYE
                     GEKYFIVPQSAILMLERDEQL"
     gene            12449..13144
                     /locus_tag="VEV83_14620"
     CDS             12449..13144
                     /locus_tag="VEV83_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46408.1"
                     /translation="MEGKKYKILLCEDDTNLGMVLKNYLELNDYDVTLERDGRLGLAA
                     FQREKYDICLLDVMMPNMDGFTLAEEIRDIDPDIPLFFLSAKTMKEDIIQGYKLGADD
                     YITKPFDSEVLLLKIKAILKRNEELNKESENIEFDLGRYHFNPKLRELAHDGKNQTLS
                     PKENELLKMLAEHKNDLLPRERALKKIWGSDTYFNGRSMDVYIAKLRKYLKDDEDIEI
                     VNIHGNGFRLVAP"
     gene            complement(13233..14867)
                     /gene="pafA"
                     /locus_tag="VEV83_14625"
     CDS             complement(13233..14867)
                     /gene="pafA"
                     /locus_tag="VEV83_14625"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004035 - alkaline phosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019203 - carbohydrate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PafA"
                     /protein_id="HYK46409.1"
                     /translation="MKFRLLSFFLFVGAVCASAQSSESVPRPKLVVGIVVDQMRWDFL
                     YRFYSLYPSDGGFKRMITQGFSCDNTLIPYTPTVTAAGHASIYTGGVPATNGIVGNIW
                     YDNVLNTTMYCVEDDTTKTVGASDEAGKMSPRNLLATTIGDELRIATNFSSKVIGISI
                     KDRGAILPAGRSANAAYWYDAANGDFISSNYYMNELPNWVKDFNKRNLPDSFFKLNWK
                     LSLPSDVYQQYCGDDEQPYERRPFGVDQKHFPYTLSSNVGSNFGAIAVTPYGNELLAA
                     LAKATIINEDLGKNKGTDLLAVSFSAPDYIGHTFGPESWEQMDDFIKLDKVIGDLLSF
                     LDAQVGKGNYTVFLTADHGTANSPGFQKIHKLPGGIFREDAFPNTLNQLLNVKFHSDK
                     IVLGIFEYHVVLNHQLIDSLNLDEKAITKTIVDYVIQRPEIAQAFPANDINSVTVSNY
                     QKQMFQNGHFPGRSGDIQLVLKPGFVDGDGFGTTHGLWNPYDAHIPLLLYGWGINQGK
                     SNREIHMSDIAPTVCALLHIQMPSSSVGQVITEALK"
     gene            complement(14954..16654)
                     /gene="glgP"
                     /locus_tag="VEV83_14630"
     CDS             complement(14954..16654)
                     /gene="glgP"
                     /locus_tag="VEV83_14630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HYK46410.1"
                     /translation="MDFKNFKVPYSADERYSKKVAYFSMEYAIHQPLKIYSGGLGFLS
                     GSHLRSAYELKQNLIGIGILWKYGYYDQARNQDQTLQVTWMEKIYSFLEDTDIKFQIT
                     VHDTPVWVKAFYLDPETFNTAPLFLLSTDLPENDYVSQTICHRLYDANVSTKVAQFIL
                     LGVGGAKLVDELNFEPEVYHLNEAHAISSAFYLLNKYKSVDKIRERLVFTTHTPEEAG
                     NEKHDIYLCHKMSYFCGLSIDEVRKLTGIEDDQFNHSLVALRFARISNGVSKLHGKVS
                     REMWSKYSGICSITSITNAQNWRYWADKQLYFSMDEHNDWRFDDRKWYLKKRAFEIVA
                     DQTGKIFNPNVLTIVWARRFAGYKRADLLAHDIERFNALLSNKKYPVQIIWAGKPYPV
                     DYPAITQFNNLVQLSKNYKNVAVLIRYELALSKRLKQAADVWLNNPRVPREASGTSGM
                     TAAMNGAVNFSTDDGWIPEFIDHGNNGFVVPMADYKNMKVQEQDDYDLNKLYEILEKE
                     ILPLYYDDPDTWRQIRKNGMRDVRFQFDSNRMAHEYYEKLYNAVSLPNEAHNFVKQEA
                     "
     gene            complement(16843..>17172)
                     /locus_tag="VEV83_14635"
     CDS             complement(16843..>17172)
                     /locus_tag="VEV83_14635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46411.1"
                     /translation="VPATNKFSGEYVRDGKNFISVRDGKNAVTYAFFLHFEKNNGECT
                     GELKGQMSLTDEKNAVYQESGDPCIIHFKFSAGSITVKEEGNCGNHRGITCPFDFTFK
                     KTTKSAK"
BASE COUNT         4944 a         3819 c         3773 g         4636 t
ORIGIN      
        1 cgcgaaatat tactgatctc ctgttcgcga ttcgctccgc ggtcacccgt tccgctcatc
       61 aactgcaggt agtcgattac gataaggcct acatggtgtt tattaaccag ccggcgtgct
      121 ttcgcgcgaa attcaaaaat gttcagcgcc gccgtatcgt caataaaaat cggcgcctgt
      181 tcgagtctct taataccctt tgtgtgtaat tgctggtact cataatcctc aagcttgccg
      241 cgtgcaattt tttcgagcgc aatttcgctt tcagccgata atatacgctg cactaattga
      301 gatgcactca tttccaaaga aaatatccct accccggtcg gctttgtagg atgcaaggca
      361 gcattccgta caaggtttaa agcaagagcc gtcttaccga ctgaaggcct cgccgcaagc
      421 acgatcaaat cggtcggctg ccagccgtac gtaacgcggt cgagacttga aaagccgctc
      481 ggcacaccgg agatatcctc ctttttgttg cgtagttcgt cgatcctgtt gattgctttt
      541 gccagagcgt taccaatgtc ctcgtaattt ttcttgagat agtgattggt aatgttgaac
      601 atctttgtct cgctgtcgtc aagcagatca aaaacgtctg tgctatcttc ataagcatca
      661 cctatgatct cgccgctgat gcggatcaat tctctttgaa tgaatttttg gaggatgatg
      721 cgcgcatgcg cctcaatgtt cgctgtcgaa accacagcgt tggtaagcct cgtgatataa
      781 tacggccctc cgatcacgtc aagctcttct ttcgttttca gctcctcgac aaccgttagc
      841 atgtcgatgg gcatactttt ctgagcgagg ctttgaaacg atttaaagat cagttggtgt
      901 gcgtcaacat aaaagcattc cggctttaat atttctacta tggtgtcaaa agcgcttttc
      961 tcaagcatga tggcaccaag caccgcctcc tccaagtcgc gcgcctgcgg aggaattttg
     1021 ccataaacca gtgtactaag gtcaacagaa gatttccggc gggcacgccg ttctttgttt
     1081 ggattaataa tttccatttt ccaaatttaa cctggtcagt aaatttttat aaacagctta
     1141 gttgaggtaa agcaatctta tcgaatgttt cctgtatgtt acctgctcaa cgagaaacga
     1201 attaaagtgc gttttctggc attgaaaaat tttttttcaa attatttttt tcaatgaaat
     1261 acacacagcc tttcaacaaa agtgttgcag ttgcacacta atttaccaac gttttcaaca
     1321 aaaacaaaag ttttaccgtt ccacgcaatc gcaattcaca ttcacgaggt gaaaaaattt
     1381 tttttgagaa caatgcttgc ttcaaaactt tttgtgtata agccgccaca gtgcgaataa
     1441 cgatattctt acaacgcata cttgttaaac tatatttttg caacaacaga tgagctatga
     1501 agatttcgta taaatggctt catgaatacc tgcccgttgg agaatcgggg ttgccggaac
     1561 cgatcgcgcc gtcgcaatta tccgcgatac ttacttcagt gggattggag gtagaggcgc
     1621 tggaagttta tgaaaacatc aagggcagcc tggctggttt gatagttggc aaagtgctct
     1681 catgcgaaca gcatccaaat gcggacaaac ttaaggtaac gactattgac gtcggcgcga
     1741 atgaaccgtt gcaaattgta tgtggcgcgc caaacgtagc aaatggtcaa aaagtgattg
     1801 ttgcgccggt cggttctaca attcatcctg tgagcggcga gccggttatg atgaagacag
     1861 caaagattag gggtgttgaa agttatggca tgatatgcgc cgaagacgag atcgggctcg
     1921 gcagcaatca ttcaggaatt tttatattac ctgtacaggc aaaaatcgga agccccgcgg
     1981 ctgaccattt taatgtttat acggactgga tctatgaaat cggccttact ccaaatcgca
     2041 tggaggcgat gcgccatatc ggggttgcga gggatgtgtg tgcctggctc acccatcata
     2101 caggccacat cgtgcggccg cgacttcctt tcgttgaatt gcaacaaagc cccacagaaa
     2161 attcctttca cgtccaaatt gagaacacta aggattgcaa acgttattca gcgttaacca
     2221 taagtggcgt tactgtaaat caatcgccgg actggcttca aaatcgacta aagtcgattg
     2281 gtcagcggcc gatcaacaat attgttgata taacaaattt tgtgttgcat gagaccgggc
     2341 aaccacttca cgcgtttgat gccgatgaaa taacatccaa aacgatcgtt gtaacaaacc
     2401 ttgctgaggg aaccaggttt gtaacgctgg acgacacaga acgcaaactt agcagccgtg
     2461 atctcatgat ttgcgacaca caccggcccg tttgtattgc gggcgtgttc ggtggcgctc
     2521 acagcggcgt gtcagacaaa acaaaaaaca tatttcttga aagcgcgtgg ttcagtcctt
     2581 ccacagtacg gcaaacctcg ttcaggcatg gtttaagaac agaggcggca gtacattttg
     2641 aaaagggcgt tgatgtttca ggaacagtcc gtgcattggc gagagcgggt caattaatcg
     2701 aggaaatagc tggcggcaac atcaccggta acattattga tgtttatccg tccgaagaaa
     2761 aaaaagcaca ggtcgttttg aaacacgatt acctgaaaaa attaagtggc aaaacgtatc
     2821 cgattccggt agttaagacc atcctgtctg cactggagtt tgaacttgtc agcgaaaccg
     2881 tcgacgcact cgaagttgcc gttccactta gcaagatgga tatcacgata cccgccgacg
     2941 tggtggaaga gatcgtgagg atcgatgggt tggacagcat tgagattcca gcatcgatca
     3001 caatatcgcc tgctcttgaa gatgaccctg cgggcgaaaa actgaaggag aaattttcca
     3061 cattattaac cggcattggt ttcaatgaga tcataacgaa ctcgatcacg aacagcaaaa
     3121 atttttcgga agaaactttg gcagggtccg ttaaactttt gaataacctg agcgcagatc
     3181 ttgacctgct caggccttcg atgctggaga caggactcga gatgattgca tacaacatca
     3241 accgaaaaag ccatgatctt cgtttttttg aatttggaac gacatataaa aatttggatg
     3301 atagttatgc ggagaaacag aatttttctt tttggctgac ctgtaaaaat gctggcggcg
     3361 actggaaaca caattcgtat atgcccgatt tttttacagc gaaaggtatt gtcgaaagcc
     3421 tcctacggag tgttaacgtt aaagacgttc agtttgcagc tcccgaaatt tttgaaaaag
     3481 gcatttttca aacgatatac agaggcgagc atggtttagg catgatattg caggcagatc
     3541 ccgctttcct gcaacggttc gacatcaggc agccggtagt ctacggtgag ctgaattatg
     3601 aggccgtctt gaaggaagct gggaaggaaa cgattacgtt tcgcgagatc ccgcagtttc
     3661 caacggtaga aagggacctg gcggtggtac ttcaaagaaa tatcgcatat cgaagtatcg
     3721 agaaaagtct aaagaatatg agtattccgt atctgcaaca attccatttg ttcgatattt
     3781 ttgagagcga taaaattgga aacgacaaaa aatctttggc gataaatttc agttttctag
     3841 atgctgaaaa gacactcact gatcaggatg tggaagccgt aatgcaaaca atcgtaaaaa
     3901 aactggaaac ggatttcgat gcggaggtcc ggaaataaat taagtttata atggaagaga
     3961 tgaaggcgca aataaaagaa ttgcagttgt cggtgcaagc cttgttgaag aagcttaata
     4021 atgtgcaaaa agaaaatgag catctgaagc aactggccgc cgaactgcaa ctcgggctca
     4081 cggaaaaaga aaatacaatg cagtctgcgc aacaaaagat cgatgcgaaa tcgttgtcca
     4141 cactttatga cgaaggggaa aagaagttgc tgcaacaacg aatagatgtt tacctgcgcg
     4201 acattgaaaa gtgtctctca ctcttaaacg cttagaaatg gaaaatttga tcccggtcaa
     4261 catccttatt gccgacagaa attaccgatt gcgcataaag ccggaggatg aggagaaact
     4321 tcggaagaca gtcaaactga tcaatgagaa gatcattgag ttcaaaacga attttgcagg
     4381 caaggacatg caggactaca ttgcaatggt cctcatttgg cttgcaacag aagaaacccc
     4441 acctatcgcc atgaaccttg atcctgaaga gatcactgga aaattgaaaa atctgcaaaa
     4501 aataattgaa gaggcgctac atagttaagc gtgattagcg aacgacctat ttattgaatt
     4561 gaattcaata atgggaaggg gaaaaaaaat tgaagcaatt gaacttgtct tcatggcttc
     4621 aaaccatttg accatgaaga caaagtccaa tattattgac cacaatcaca tcgccgcttc
     4681 tgaaagtttt ggctgcagcc ccatattgct catatcatcg ggaacggata agagattagc
     4741 ccttgggtat agtggctaat tccagatttg tatttagttt tcgattggga acggaggaaa
     4801 aacgggtatt tcggtaatgc caaaacggat gccaagcgca aactctgttt tattgtcttg
     4861 attttcaatt gtagtcatct ggcatccgct ctggatcttt cccaaattgg cacattaact
     4921 tccaaatttg ggctttcgat agttttaaaa aatctgcttt ccgttaatta ccttcgcgaa
     4981 ttctctttca tataattttg aaagacttat gtatcagttt aaaatttaca ttcatggacg
     5041 taattgctat aataacagga attatttctt taatagcagg gatagcatta gggaaagttc
     5101 tttttgccaa gaacacacaa aaaaagctgc aggacgctga aacgcaggcc caacaaataa
     5161 tttcagaagc gcagctcaaa gctgaaacaa caaaaaaaga aaggatctta gaagcaaaag
     5221 aaaagtttgt ccaacttaag gcagagcacg ataaggaggt actcgaaaga aacaaaaaga
     5281 tcagcgataa tgagaatcgt gtaaagcaaa aagagatcat catcaaccaa aaggaagctt
     5341 cactggaaaa acacatcaag gaaaatgagg caatcaaaga aaatctgaac cgccagcttg
     5401 aggttgttgc tcaaaaaaga aacgaactgg aaaagcacca ggaagaacac atcaagcgtc
     5461 ttgagaagat cgccggctta acggccgacg aggcaaaatc ccaacttgtc gaaagcctga
     5521 aacaagaggc ccaaacgcaa gcgctcgtac ttcaacagga agttatcgaa gatgcaaaac
     5581 tgcgcgcaaa caaagaggca agaaagatca ttatccaatc gatacagcgc acggcggcag
     5641 agcaaaccat agaaaacacc gtcaccattt tcaaccttga aagcgatgag atcaaaggtc
     5701 agatcattgg tcgtgaagga cgaaacatcc ggacgatcga agcagctacc ggcgtagacc
     5761 tgatcgttga cgacacgcct gaagcgatca tcctatcgtc gtttgatccg ttgcggcgcg
     5821 aaattgcaag gctcagcctg cagcgcctgg tcgccgacgg aaggatccat ccagcgcgca
     5881 tcgaggaggt tgttgagaaa acacggaagc agcttgaaga acaggtcgtt gaaattggag
     5941 agcgtacagt gatggaactc ggcattcatg gtttgcacaa agaattagtg agaattgtcg
     6001 gaaaaatgcg ctttcgttca tcttatggtc aaaacctctt gatgcacagt cgggaagtag
     6061 cgaatttgtg cgccacgatg gccgccgaac tcgggctaag tccgaagctc gccaaacgtg
     6121 ccggtttgct acacgacatc ggcaaagttc ctgatgaaga aaccgaattg agccatgccc
     6181 tcctcggcgg caagcttgca gaaaagtacg gtgaaaatcc agcggtggta aatgcgatcg
     6241 ccgcacacca cgatgaaatg gaaatgcaat atattatctc acccatcgtg cagagctgtg
     6301 atgccatcag cggtgcaagg cccggcgcgc ggagagaaat aatgcaacaa tatctgcagc
     6361 gcatcaaaga tctcgaaacg ctggccatga gctataccgg cgtagaaaaa gcatatgcaa
     6421 tccaggccgg ccgcgaattg agagttattg tggaggcgga aaaagttacc gataccgaca
     6481 gcgataaact gagtttcgag atcgcccaga aaattcagaa cgagatgaca tatcccggcc
     6541 agatcaaggt cacggtaata cgcgaaaaac gagcggtgaa cctggcgcgt taataatgtt
     6601 tgccgggcgt gtatgggtga gttttatttg gaagttctgg tgtcagaagt tacctttgcc
     6661 gtccttttaa aaaatagagt tatgaacgca gcagttcaat ttgtacacga tcagcttaca
     6721 ggcaaaaaga aacatccgag gtttaaggca ggtgataaca tcacagtgaa ctataagatc
     6781 gtggaaggcg gaaaagaacg tatccaggga tttcgcgggg atgtgctgaa gatccaggga
     6841 actggttcta ctgctacgtt tacggtacga aaaatatctg atggcatcgg cgtagaaaga
     6901 gtgttcccgt ttttctcacc gaatgttgaa tcgatcgtgc tgaataaagt tggtaaagtt
     6961 cgtcgcgcca aactatatta cctcagaagc cgcagcggta agagcgcaag gatcaaagaa
     7021 aaaaggatgt agttctttac gtctagttaa aacgtcctgt aaaaagatat ttcttcagcg
     7081 tatttctttt ttagtgttac tttgtagtct aaaatttttt ttatgagtat gcccggcggg
     7141 tctgaatgga tcctaattat ccttgctgtt ttaatcttat tcggcggcag aaaaattcct
     7201 gagttcatga ggggtttagg aaaaggaatt cgtgaattca atgacgcaaa aaataacgtg
     7261 cgcagagagc ttgaagatgg aatgaatgaa ccgccccgtc aggctccttc agcgaacaac
     7321 aaaacacaat ctacaacaac cacaagccag ccttaattcc tttcaatcat attgaagcct
     7381 ttgtttagtt tttcatctat caaagactac caatttaatt tgttgaacgg ccacaccaca
     7441 tgcgttgagg ccgtttctca ttatttggaa aacatacggc gcaacgccca cctgaacgcg
     7501 tttcttgaag tatacgaatc ggaagcatta gaacgtgccg ccgctctgga tcgggaacga
     7561 cgagacggca agccacctgg aaaaatgcac ggggttgtga tcggtttaaa ggatgtgatc
     7621 gcattcaagg gtcataaact ttccgcttcg tcaaaagtcc ttgaaaattt ccgctcgatt
     7681 tttaatgcaa cggtcactga aaagctgttg cgcgaagacg cgataattat cggccggcag
     7741 aactgcgacg aatttgccat ggggagcagt aatgaaaatt ctgcctatgg acctgttttg
     7801 aatgcggccg attcgtcacg ggtgcctgga ggttcgtctg gtggctcggc tgtgtccgtc
     7861 atggccggtt tgtgcatgat cagtctggga agcgataccg gcggatcagt aagacaaccg
     7921 gccgatttct gcggcgtagt aggattaaaa ccgtcttatg gaagggtttc ccgctatgga
     7981 ctgatagcat acggttcgtc ttttgaccaa ctcggggttc tcgcaaggaa tgtggatgat
     8041 gcaggaatta cgctggaagt gatcgcggga cctgatgctt acgacagcac agtaatcaat
     8101 tcagaattcg aatatgtgaa ttctaatgct ccggagaact ctgaccgtta tacagttggt
     8161 tattttcccg caacattcga acatccaggc cttgatccag aaatcgcaac cattcaaaaa
     8221 gcatttatcg ctcaactgac cgcgcatgac atcgcagtta agccaatcga tttcgacctg
     8281 ctcgatttta tcgtgccagc ctactatatt ttgacgacgg cagaagcttc gagcaatctt
     8341 tcacgatacg atggaataaa atttggaaca gttgcatgcc cggaaaccag cgacctcacc
     8401 gaacaaatta agctaacccg cagcaaagga tttggccagg aagtaaaacg gcgcatcatg
     8461 cttggcacgt tcgttctaag cgaaggttat tacgaggcct acgtgtccca ggcacaaaaa
     8521 gtacggaagc tgcttttgca aaaaacgaaa tctgtctttg cggaagttga tgccttactt
     8581 tccccggttt cgccatttac tgcttttaag ttaggcgaaa aaaaatcgga cccggtggaa
     8641 atgttccttg ccgatatcta caccgttttt gcgaatctca caggcatacc ggccgtatcg
     8701 cttcctttat ttaaacactc caatggcatg cctttcgggc tccaggtaat ggcatctcaa
     8761 ctaaatgaat taaatttgct ccacctttct aaaaagctta tcgggataaa tcgtcttaat
     8821 aaccaatcaa acgagccgcg gttcgattga tattaaaatg ttgagaattg ataaagaagc
     8881 gttttggtaa agtctctctg ttaaccgtga aaaggttgga ccgccgggtt ggagtgctaa
     8941 cggtgttcct tttattattc caattttcct ctttttgtgc tggggcaaac ccgaatgaca
     9001 gaactttttt gaaggatagc agtggcaccg atacaaccgg taaaatcctg gctactgacc
     9061 cggttaaaga cagctctaaa ttatttgcaa gccttttgtc gccggacgag ggaaaagttt
     9121 ctaatttttc agtaaaccca caagcaaagt cgtttgttga cgactatatc cgcaggcaca
     9181 atcgcagcct caacaatatg aagatctggg gcaagccgta tttcaatttg tatgaccaca
     9241 tcctcagctc ctacggtgtg cccgttcagc taaaatattt atcggtcatt gaaagcagcc
     9301 ttagcaacaa tgctatctcg tgggccggag ctgtgggccc gtggcagatc atggaagatg
     9361 cggcgcggga gcacgggttg aagaccgggt attacgacga ccggctggat tatataaaaa
     9421 gtaccaacgc agccgcacaa atattaaagg agctttactc aacttatggc gattggctac
     9481 ttgtcatcgc ggcttataac tgcgggacgg gaaacgttaa ccaggcgatc gctaaaggcc
     9541 gcagcagaaa tttttgggaa attcaatact atcttcccga ggagacacgc aaccacgtaa
     9601 agaagtttat tgcaacacat tacttttttg aaggcgacgg aagtgtggtg acgatgactg
     9661 cgagcgaagc gcaaaacgca gttttcagca atgctgtaaa caaacccgca gatgcgtaca
     9721 tggagttggt ggcaagctgt gcgacaataa acatttacgg aaaatataac tcagttgtaa
     9781 ttgcaaatac actgatgatg gacattacag tttttaacca gctaaacccg aatatagatg
     9841 ctgaacttgc caagggtgga atttatcctc ttcgaattcc tgctgacaaa gtctcattgt
     9901 tccaggcaaa aaagatagaa atactaaagc aaagtgtaga gcttttccta aaccaggcat
     9961 cggttgaacc ggcggcagga actaaataga tgcggattta aaatcgggtg actgaattca
    10021 acactttact actggagcgt agagcgaagt ttatagaaag tagttcccag acagaacagc
    10081 gattacagat tagaagtcat cttcagactc atcatcgaaa tctgaatcat taaagaggtc
    10141 aaattccttc aggtcatcgt caaacttaaa atcatcctcc tcttcttccg actccttctt
    10201 tcctgctttc tttgcttttg atcttggaat atcgaactca tcaaaatcag gatcccagtt
    10261 ctcttcttct tccggcttgt cccattcatc tacctcatct tcggcgacgt cactgtcgtc
    10321 gtcttctccg tcgccagctt cctcgttgtt ctttttcgat ttcggcgcag tcttctttaa
    10381 tgagtccttt acctcttcct gctgttcatc aagatcatcc tcttcttctt cctccaattg
    10441 ctttttcgat ttcggtgagg cattctcaac atcttttttc tccacaggct tgttgctgga
    10501 tttttttgct ttatctgatt tcgatgacat agtcaatttg gattagcagt tgtaaaattt
    10561 caacgacttt tttaatcaac aaaaaaaatt tttacggcgc aacaatgatc acctggtctc
    10621 tctgagggcc gttcgataca taagatacag gagcctttat atattgattt atgaatgata
    10681 tatattgctg catttcaagg ggcaaattat tcgaattttt tatagcggtc gtgtctatgt
    10741 tccagccatt gaacgatttg tattccggct tcatatttac ttgcattaac tggaatggaa
    10801 ccctgtcggt ttcctgccca tcgatggaat aatttacaca aacttttaat tgctcaaaac
    10861 tatcaagcac atctgctttt gtcatgacca cctttgtaac accattcagc ataaccgtat
    10921 attttaatgc caccagatcg atccatccgc agcgacgcgg tcgcccggtt gttgctccaa
    10981 attcgtttcc gatttttcga agctcctcac ccactgagtc ctgcaactcc gttggaaacg
    11041 gtcctcctcc tacgcgcgtg caatatgctt tcgtaacacc gatcacctcg cggatctttt
    11101 gtggggcgac ccccagacct gtgcacacac cggcggagat cgtattcgat gaggttacaa
    11161 acgggaacgt tccaaaatca atgtccagca tgctgccctg tgcaccttca gctaagactt
    11221 ttttgccttt cgttatttcc tcattaataa aatattcgcc actcacaata ttaagtgttc
    11281 tcagaaattc gactgcttca aaaaactctt cttcccattc actgatctcc tcgatgaaat
    11341 gaaagttatc gagcagtttt tgatgtttca aacgcagctt tatgtattga gtgatgaaag
    11401 acttatcggt gatatcgcca acacgcaacg cgtttctgcc ggttttatcc atgtaagaag
    11461 ggccaattcc tttgagtgtt gacccgatct tgccctctcc tttctgcagc tcagacgcct
    11521 tatctaaggc acgatgtgtc ggtacaatta aattagtgcg ctccgaaatg aacagattct
    11581 ttcgtacatc gatgccgaat gcagcaacgg tttcgcattc acgctttaaa gtaacgggat
    11641 caagcacaac accatttccg attatgttta tcgtgttctg atgaaaaatt ccggaaggga
    11701 tctggtgcaa cacaattctt ttatcatcaa tatacaatgt gtgaccagca tttggtccgc
    11761 cctggaaacg ggcaataatg tcatactgcg gcgcaaaata atcaacgatc tttcccttac
    11821 cctcatcgcc ccactgtaaa ccaagaatta catctaccat tcattcattt tttactgagc
    11881 aacaaaagta acggttggcg atgggtcagg ggaataattt tcgaattaca actgctcatc
    11941 ccgttcgagc attaagatgg cgctttgagg aacaataaaa tatttttctc cttcatatat
    12001 tacttcggtt gcaccgctca ataaaaagat ggccaggtct ccttctttag cttgtaacgg
    12061 aacatacttc acctgctctt cctcattttt ccacgcttca ttttcaacgg gtagcggaat
    12121 cgcataccca gggcccgttt tgatcacata accttgctgg accttttcct tttcctggac
    12181 acccggcggt aaatataaac cgctggcagt ttgttcatct ggttttgagg gtctaatcaa
    12241 aatgcggtca cctatcacga tcaacttctt cagtttatta tcctgtgtca acaacataat
    12301 ttctaatttc tataaaagta taaacatccg ttaaactaca cctttgcttt gcaattgttt
    12361 taatcaatct tatctttaat ggaaattcta tttaatacac tttaaggcat tgtaattgat
    12421 gctaagtttc taaacaaaaa attgaactat ggaaggaaag aaatacaaaa ttctattatg
    12481 cgaggacgat acgaatttgg ggatggtgct gaagaattac ctggaattaa acgattatga
    12541 tgtaacgctc gagagggacg gaaggctcgg ccttgccgct tttcaacgtg aaaaatacga
    12601 tatctgtttg cttgatgtaa tgatgcctaa catggacggt ttcaccctgg ccgaagagat
    12661 aagagatatt gatcctgata tcccgctttt ctttctgagt gcaaagacga tgaaagaaga
    12721 catcatacaa ggatataaac tcggtgcaga cgattatatt actaaaccct tcgacagcga
    12781 agtactgctg ttaaaaataa aagcgattct gaagcgcaat gaagagctga acaaagaaag
    12841 tgagaacatc gagtttgatt tgggccgcta tcactttaat cccaagctgc gggaactcgc
    12901 gcatgacggg aaaaaccaaa cactttctcc aaaagaaaat gagttgctga agatgctcgc
    12961 cgagcataag aacgacctgc tcccccgcga acgggcttta aaaaagatct ggggcagcga
    13021 tacatatttt aacggccgaa gcatggacgt atacatcgcg aagctccgca aatacttaaa
    13081 agacgatgaa gatatcgaga tcgtcaacat tcacggcaat ggctttaggc ttgttgctcc
    13141 gtgatgtttg atatacgaat tagaggctcc cgcaatttgc gggagctttt ttttgtgaag
    13201 atatcagcga ctacaggcgg tagtgcaaca catcacttta aagcttcggt aataacttgt
    13261 ccaaccgaac tgctgggcat ttggatatga agaagtgcgc aaactgtggg cgcaatgtca
    13321 gacatgtgga tctcacgatt tgactttccc tggttaattc cccagccgta taaaagtaac
    13381 gggatatgcg catcgtacgg attccaaagc ccatgtgtgg taccaaatcc atcgccatcc
    13441 acaaagccgg gctttagcac caactgtatg tcgccgctgc ggccgggaaa atgtccgttt
    13501 tggaacattt gcttttgata attacttacc gttacggaat taatatcgtt tgccggaaat
    13561 gcctgggcga tctccggcct ttggatcaca tagtcaacga tggttttagt gatcgctttc
    13621 tcatcgagat ttagcgaatc gataagctga tgattcaaca caacgtggta ttcaaaaatc
    13681 ccaagtacaa ttttatcgga atgaaacttt acgtttagca gttgatttag cgtgtttggg
    13741 aaagcatctt ccctaaaaat tccaccgggc agtttatgta tcttttgaaa tcccgggctg
    13801 ttagcggtgc catgatccgc ggttaaaaat accgtataat tgcctttacc tacctgcgcg
    13861 tccaggaaag aaagaagatc accaatcact ttatccagct tgataaagtc atccatctgc
    13921 tcccaagatt ccggtccgaa cgtgtggcct atataatcag gcgccgaaaa actcaccgcc
    13981 aacaaatccg ttcctttgtt cttccctaaa tcttcattta ttattgttgc cttcgcaaga
    14041 gcagcaagca gttcgttgcc atatggcgtt acggctattg caccaaagtt tgatcccaca
    14101 tttgagctga gcgtgtaagg aaaatgtttt tggtctacac caaacggacg cctctcatac
    14161 ggttgctcat cgtcgccgca gtattgctga taaacgtcag agggtaaact aagcttccag
    14221 ttcaatttaa aaaaggaatc aggcaagttt cttttgttga agtccttcac ccaattcggg
    14281 agctcattca tataataatt gctgcttata aaatcgccat tcgcagcgtc gtaccaatag
    14341 gctgcattcg cgctgcgccc ggctggcaga atagcacctc tgtctttgat tgaaatgccg
    14401 atcaccttcg aagaaaaatt cgtggctatg cgcagttcat cgccgatggt tgtagcaagc
    14461 aaatttctcg ggctcatttt accggcttca tcagaggcgc cgacggtttt tgtcgtatca
    14521 tcctccacac aatacatcgt tgtgtttagc acgttgtcat accagatgtt gcccactatt
    14581 ccgtttgtcg caggcacacc gccagtgtaa atggatgcat gccctgccgc cgtcactgtt
    14641 ggtgtgtaag ggatcagcgt gttgtcgcag ctaaatccct gcgtgatcat acgtttaaaa
    14701 ccaccgtcac tcgggtacaa agaataaaac cggtacagga aatcccagcg catttgatcg
    14761 accacgattc caacgaccag tttcgggcgt gggacgcttt cagaagattg agcagaggcg
    14821 caaacggcgc caacgaatag aaaaaaggaa agcaatctga atttcattca aaacatttgt
    14881 gcacaaaata aggccgccgg gttggaatat cttcactcga tgaaaaatag caggaagaat
    14941 tttggtaaaa ctgctacgct tcctgcttta cgaagttatg tgcttcgtta ggaagcgaaa
    15001 ctgcattgta taacttctca tagtattcat gcgccatccg gttgctgtca aactggaaac
    15061 ggacatcacg cataccgttc tttcttatct gtctccatgt gtccgggtca tcgtaataaa
    15121 gaggcagaat ttccttttca aggatctcat acaacttgtt caggtcataa tcgtcttgct
    15181 cctgaacttt catattttta tagtcagcca taggaacaac aaaaccattg ttgccatgat
    15241 ctataaactc tggtatccat ccatcgtccg ttgagaaatt aacggcgcca ttcattgcag
    15301 cagtcatacc actggttccc gacgcttcgc ggggcacgcg cggattgttc aaccaaacat
    15361 cggctgcctg ctttagacgt ttacttaaag caagctcata gcggataagg acagccacat
    15421 ttttgtaatt cttacttaat tgaaccaggt tgttgaattg tgtgatcgcc gggtagtcaa
    15481 ccgggtaagg tttaccagcc catattatct gaaccgggta ttttttgttg ctcaacaacg
    15541 cattaaaacg ttcgatatca tgtgcaagga gatctgcgcg tttataaccg gcaaaacgtc
    15601 ttgcccaaac aatcgtcagc acattgggat taaatatttt ccccgtttga tctgcgacaa
    15661 tttcaaacgc acgttttttc aaataccact tgcgatcatc aaaccgccag tcattatgct
    15721 cgtccatgga aaaatataac tgcttgtcag cccagtaacg ccagttctgc gcattggtaa
    15781 tcgatgttat agaacatatc ccactgtact tgctccacat ttcccttgaa acttttccgt
    15841 gaagttttga tacgccattt gaaatcctgg caaatctcaa cgcaaccaaa gaatgattga
    15901 actgatcatc ctcgatgcct gtgagcttcc ttacttcgtc gatactcagt ccacagaaat
    15961 aactcatctt atggcagaga taaatatcat gcttctcgtt cccagcttct tcgggcgtat
    16021 gcgtagtaaa cactaagcgc tcccggatct tgtcaacgct cttgtatttg ttcaacaggt
    16081 aaaatgcaga cgagatcgca tgtgcctcgt tgagatggta aacttccggc tcgaaattca
    16141 gttcatcaac cagttttgca cctcctacac caagtaaaat aaattgggcg actttcgtgg
    16201 aaacgtttgc gtcatacagc cggtgacaga tcgtttgcga gacgtaatca ttttcgggaa
    16261 gatcagtgct caataggaat aacggggccg tgttgaaagt ctccggatcc aggtaaaatg
    16321 cttttaccca aaccggtgta tcatgaacag ttatctggaa cttgatatcg gtatcttcaa
    16381 gaaagctgta tattttttcc atccaggtta cctgcaatgt ttggtcctgg ttgcgagcct
    16441 ggtcgtaata accatatttc cagagaatac caatcccgat aagattctgc tttaactcgt
    16501 atgcactgcg aagatgagaa ccagacagga agccgaggcc accgctgtaa attttcaagg
    16561 gttgatgtat cgcgtattcc attgaaaaat aagcgacctt ttttgaatat cgctcatctg
    16621 cagaatacgg aaccttgaaa tttttaaaat ccatagctat tggtttataa aaagcgacgc
    16681 aatataatgc ttaaattata aatgtatttt ttacacgaat tactgttgat aactaagcga
    16741 aatggttaaa tacaaacgac atcgggttga accacctaca tacaaataga cggagtgaaa
    16801 ccagtttggt ttacaggcaa acgctcattt gcggaagtga aattatttgg ctgatttggt
    16861 cgtcttttta aatgtgaagt cgaacgggca ggtgataccg cgatgatttc cacaattgcc
    16921 ttcctccttc accgtgatgc tgcccgctga aaacttgaaa tgaattatac aaggatcgcc
    16981 gctttcctgg taaactgcat ttttctcatc ggtcaagctc atttgtccct tcaactcacc
    17041 cgtacattcg ccgttgtttt tttcaaagtg cagaaaaaaa gcataggtca ccgcattctt
    17101 tccatctctc acagaaataa agttcttgcc gtcccgaaca tactccccgc taaacttatt
    17161 ggtcgccgga ac
//
LOCUS       DASQJI010000537         6150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1138797,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000537 DASQJI010000000
VERSION     DASQJI010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6150
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138797"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VEV83_14640"
     CDS             <1..341
                     /locus_tag="VEV83_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HYK46412.1"
                     /translation="QEDHVSMGSISGRKLCQVLDNLEYILAIELMSACQAIEFRRPLQ
                     SSEILEFAHDHVRDSVSFAEEDRIFSEDIIKIKNIISDFSFVDKVNGFARSKGIFLND
                     GYDEFALAIN"
     gene            410..646
                     /locus_tag="VEV83_14645"
     CDS             410..646
                     /locus_tag="VEV83_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46413.1"
                     /translation="MNSIEAMRKEVKQYIDTADEKVVKMMHAMLEVDAEDDWWGTMPD
                     EVREHLEEAIEQADRGEGSSHEEVKKKYSKWFAK"
     gene            652..942
                     /locus_tag="VEV83_14650"
     CDS             652..942
                     /locus_tag="VEV83_14650"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HYK46414.1"
                     /translation="MPNAIHSYIKNVDYLKQNWTGKEVDKFIDLVEKKIHNLSNHPRL
                     GVSRNKKYPNIRLTLIHKRVALIYRHKPAMNEIELLVFWNTSQNPRKLKSIT"
     gene            1175..2893
                     /gene="hutU"
                     /locus_tag="VEV83_14655"
     CDS             1175..2893
                     /gene="hutU"
                     /locus_tag="VEV83_14655"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HYK46415.1"
                     /translation="MTTITKSKYDPIKYKTPTGSQLNCKGWIQEAALRMLLNNLNPEV
                     AEKPDELIVYGGRGKAARNFEALDNIIAALKILENDESLLIQSGKPVGILKTHKDAPR
                     VLISNSQLVPKWATWEHFDELEKKGLMMFGQMTAGSWIYIGSQGIVQGTYETYAAAAD
                     KHFGGSLKGTLNVTAGLGGMGGAQPLAITMNEGVALIAEVEEWRIDKRIETKYLDEKY
                     FDIDEAIARSSELKAQSSARSIGVVCNAVHLLERLVERNIVPDTLTDQTSAHDPLIGY
                     WPHEITYEQAKVLREQNPKEYIDYAYRSMYHHVQLMIQLMDKGAITFDYGNNIRARAQ
                     EYEMSNLKPQASNIKPGRCFDFAGFVPAYIRPLFCEGKGPFRWAALSGDPNDIAVTDE
                     VIANMFPKNQSLQRWLKLAHERIAFQGLPARICWLGQGEREKAGLAFNELVRTQKVKA
                     PIVIGRDHLDTGSVASPNRETEAMLDGSDAVADWPILNALVNTAGGASWVSLHHGGGV
                     GMGYSIHAGMVIVADGTDEAAARLSRVLRNDPGLGVIRHADAGYEIARETAKDHHLDI
                     ADRFVK"
     gene            3047..3916
                     /locus_tag="VEV83_14660"
     CDS             3047..3916
                     /locus_tag="VEV83_14660"
                     /inference="COORDINATES: protein motif:HMM:NF023805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M57 family metalloprotease"
                     /protein_id="HYK46416.1"
                     /translation="MRRIFYSTGIAALLIVALIISCQKSANTSATNGADEDFTGTPLT
                     ADEQALVKAAGFDETFAEKRADGNYLIEGDMLVSKAQLQSMAGVAPAFNFIIANEEHY
                     RTTNVVNTGGGVRHITVSLASGFPSYYSTGLDQALAHYNTLNLNIHFDRVSSNGQIQI
                     KAANLGRTVGGGCVLGQSAGFPTSNGDPASGFTLSNTRCALQYLNTANKADEVMCHEL
                     GHCIGFRHTDYMNRISCGSNSNEGDAGVGAIHIDNTIGTVTSGNYNSWMMACVNGDNS
                     LSTEDNYALQFVY"
     gene            4036..>6150
                     /locus_tag="VEV83_14665"
     CDS             4036..>6150
                     /locus_tag="VEV83_14665"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HYK46417.1"
                     /translation="MRHRSHPCINLFFFLITAQCAVAQDNRQDNGDSLFAKYAVASDH
                     SFLATRPYYVIQWPTTLRKNIRIARQLDEKVAIIEVTTREDLESLRHEAKIAEALDSW
                     KFSPSAERRLSANHQQQQFIISSSNIDVLLSFLRTVQGDAQIISVDRQSNSVVIQTSA
                     NFAMKHLLPMKEVTFIDVREEPHDEAKIIGYDRSFDGINAVDYAIPGANGNNIVAGVK
                     EQKMQEEDLDIYKRVLPSSIAAANVTDHATVISSIIGGSGNRFYDGRGIANACRFFPS
                     TFSNLFADDSTILNANHVTVQNHSYGTVIQQFYGAEAVSYDEQAWANKKIIHVFSAGN
                     EGTSAATGGQYANIPGFANLTGNFKMAKNVITVGAIDNNENIPLLSSAGPLYDGRLAP
                     QLIALGPNGTSDAAAIVTGTIAVMQQVYADSNNQSLPPASLVKALLYNTADDVYSDGI
                     DYKTGFGLLNSYAAIRSLQKKEYDSGTVTQDRSWTKTISVPAGAAQLKVTLAWIDTPA
                     SANNNRALINDLDMQVTSLADGSVYKPWVLNSTPNADSLSQPPTRRRDSLNTAEQVSI
                     DLPVAGNYNIKIIGTSVQSASMPFHIAFHMDTLNTFAFTSPQNTSDIRSEEQPGIFVR
                     WKTFVADSNETGNLYISYDKEKSWQLIQSSLKIYRNEYLWTVKDTTSTGVFKMETSFG
                     SFLSKQFIISPVTRLSVDFVCED"
BASE COUNT         1840 a         1293 c         1472 g         1545 t
ORIGIN      
        1 gacaggaaga ccatgtgagc atgggtagca tcagcggaag aaaactttgc caggtgctgg
       61 ataatcttga gtacatcctt gcgattgaat tgatgagcgc ctgccaggcc attgaatttc
      121 ggaggccatt acagagcagc gaaatacttg aattcgcaca cgatcacgtc cgcgactccg
      181 tatcatttgc cgaagaggac agaatttttt cggaagacat tatcaaaata aaaaacataa
      241 tcagtgattt tagttttgtg gacaaagtga atgggtttgc aagatcaaaa ggaatttttt
      301 tgaatgatgg ctatgatgaa tttgctctgg cgattaacta agccgcaact ggtgaacaga
      361 gatccaattc tacaaaaatg attaatttcg actaccaaga aagttttgta tgaatagtat
      421 cgaagcgatg cgcaaagaag taaagcagta tattgatact gccgatgaaa aagtggtaaa
      481 aatgatgcat gcaatgctgg aagttgatgc agaagatgac tggtggggta caatgcctga
      541 cgaagtgagg gagcatcttg aggaagcaat tgagcaggct gaccgtgggg agggtagttc
      601 tcatgaagaa gtaaagaaaa aatattcaaa gtggtttgca aagtaacgtg gatgcccaat
      661 gctattcata gctacataaa aaacgttgat tatcttaaac agaattggac aggcaaagaa
      721 gttgataaat ttattgatct tgtagaaaag aaaattcata acctttctaa tcacccgcgg
      781 ctaggcgtct cccgcaacaa gaaatacccc aacatacgcc ttacacttat tcacaaaaga
      841 gttgcattaa tctacaggca taagcctgcg atgaatgaaa ttgagttgtt ggtattctgg
      901 aatacttcgc agaatccacg taaattaaaa agtattacat gatgatggaa tttctatact
      961 atattgaagg atggggcaag tgtgttcttc aactaacaat tacatttcga atacaattgc
     1021 aaaaggcgtt cccggttaat tgagtgcaat catctgctca ccggcgaaca agccgctcca
     1081 gtgtgcgacg caacggaagc tgaatagtaa tactgtcgct aagtaccacc ttcgcataag
     1141 ctaccgtggg caggcaaaaa ataaaaatca tgttatgacc accatcacaa aatcaaaata
     1201 cgatcctatc aaatacaaaa cgccgacggg ctctcagctt aactgcaaag gttggattca
     1261 ggaagcggcg ttacggatgt tgttaaacaa tctcaacccg gaggtggccg agaaaccgga
     1321 tgagttgatc gtgtatggcg gacgtggcaa agctgcacga aattttgaag cactcgataa
     1381 catcatcgca gctctgaaaa ttttagaaaa tgatgaatcg ctgctcatac aaagcggcaa
     1441 accggtcggc attttgaaaa cacataagga tgcgccgcgt gtgctcatat ccaattcaca
     1501 gcttgtacct aaatgggcaa cgtgggagca ttttgatgag ctggagaaga aagggttgat
     1561 gatgttcgga caaatgactg cggggagttg gatctacatc ggatcacagg gaattgtgca
     1621 gggcacttat gaaacgtatg ctgcggccgc cgacaaacat tttggcggat cactgaaagg
     1681 gacactaaat gtcaccgctg ggctcggcgg catgggtggc gcgcagccgt tggcaatcac
     1741 aatgaacgaa ggtgttgcat taattgcgga agtggaagag tggcgcattg ataaacgcat
     1801 cgagacaaaa tacctcgacg aaaaatattt tgatattgac gaggctattg ctcgcagctc
     1861 ggagcttaaa gcccagagct cagcgcgtag catcggtgtc gtttgcaatg cggtgcattt
     1921 attggaaaga ctggttgaaa gaaacattgt gcctgacaca ttaaccgatc aaacatccgc
     1981 gcatgacccc ttgatcggat attggccaca tgaaataact tatgaacagg caaaagtttt
     2041 acgggaacaa aatccgaagg aatatatcga ttacgcttat cgaagcatgt atcatcatgt
     2101 gcaactaatg attcaattga tggacaaggg cgcgatcaca tttgattacg gaaataatat
     2161 tcgtgcgcgt gcacaggaat atgaaatgtc aaacctcaaa cctcaagcct caaacatcaa
     2221 acccggccgc tgctttgatt tcgcgggctt cgtccctgcc tacatccggc cactattttg
     2281 tgaaggcaaa ggccctttcc ggtgggcagc cttaagtggc gatccgaacg acattgcggt
     2341 gactgatgag gtgattgcta acatgtttcc caaaaatcaa tcactgcaac gttggctaaa
     2401 acttgctcac gagcggatcg ctttccaggg attgcctgca cgtatttgtt ggcttggaca
     2461 aggagaaagg gaaaaggccg ggctggcctt caacgaactt gtgcgcacac aaaaagtgaa
     2521 agcgccgatt gttatcggac gcgaccatct tgatacaggc agcgttgctt cgcccaatcg
     2581 ggaaacagaa gccatgctcg acggcagcga tgcagtggcg gactggccga tcctgaatgc
     2641 attggtgaac acagcaggtg gagcgagctg ggttagtctt catcatggcg gcggcgtggg
     2701 gatgggctat agtattcacg cgggtatggt aatagttgca gatggaacgg acgaagctgc
     2761 agcaagattg agtcgcgtgt tgcgcaatga tccggggctg ggggtgatcc ggcatgctga
     2821 cgcaggctac gagattgcaa gagaaaccgc aaaagatcat caccttgata tcgctgacag
     2881 atttgttaag taactgtcgc tcgctttcgc aactggttgt tgtccaataa ccaaccgtat
     2941 cgcgaacacg acgtcaaaaa atatatcagt gcttacggtt gttagtttta aaatatgttt
     3001 actttagttg cgttgttccc taatcataaa ctcaaacaat ttaaaaatga gaagaatctt
     3061 ttattcaacc ggcattgcag cgttactgat cgttgcctta attattagct gtcaaaaatc
     3121 agcaaacact tcagcaacta atggcgctga cgaagacttc acaggcactc ccctcactgc
     3181 ggatgaacaa gcccttgtaa aagcagcagg ttttgatgaa acctttgcgg aaaaaagagc
     3241 ggacggaaat tatcttattg aaggagacat gttggtcagc aaggctcagc ttcaatcgat
     3301 ggctggtgtt gctcctgcct ttaatttcat cattgctaac gaagagcatt atcgtaccac
     3361 caacgtggtt aacaccggcg gtggcgttag acacataact gtaagtttag caagcgggtt
     3421 tccaagctac tactcaaccg gacttgacca ggcattggct cattacaata ctttgaacct
     3481 taatatccac tttgaccggg taagcagcaa tggccagata caaattaaag ctgcaaacct
     3541 cggaaggact gttggtggtg ggtgcgtctt aggacaatca gccggttttc caacaagcaa
     3601 cggcgatccg gcttccggtt ttacattaag taacaccagg tgtgcacttc agtatctcaa
     3661 tactgcaaat aaggcggatg aagtaatgtg ccacgaactg ggtcactgca ttggtttccg
     3721 tcatacagat tatatgaaca ggatcagctg tggatcaaac agtaatgaag gagatgccgg
     3781 tgttggtgct atccatatcg ataacacgat cggtacagta acttcaggca attacaattc
     3841 ctggatgatg gcttgcgtta acggcgataa ttctttgagt acagaagaca attatgcttt
     3901 gcaatttgtt tattaaaaat atgtgtcatc attcaatccc tttctttgtc gagaaaggga
     3961 ttttttttgc ttgaacttct gcagaaaaaa gttgccaata attgttagcg ttgaccttaa
     4021 atttactgtc agcaaatgag gcacagatca catccctgca tcaacctgtt ctttttctta
     4081 ataactgcac agtgcgcggt tgcgcaggat aaccggcaag ataatggaga cagcttgttt
     4141 gcaaaatacg cggttgcttc agatcattca ttcctggcca caaggccata ctatgtcatt
     4201 caatggccaa cgaccctccg caaaaacatt cgcatcgccc ggcagctaga tgaaaaagtg
     4261 gctatcatcg aagtcaccac acgtgaggat ctggagtcat tgagacatga ggcaaagatc
     4321 gcggaggctc tagattcgtg gaaattctcg ccgtcggcag aacgacgatt gtcagcgaat
     4381 catcagcaac aacaatttat tatttcatca tcgaacattg atgtgttatt gagttttctt
     4441 aggactgttc aaggggatgc gcagatcatt tctgtagatc ggcaatcaaa ttcggtcgtc
     4501 attcaaacga gtgcaaactt tgccatgaag catttgttgc cgatgaaaga agtgacattt
     4561 atagatgttc gcgaagagcc gcatgatgaa gcaaagatca tcggatatga ccgcagtttt
     4621 gatgggatta acgcggtaga ctatgcaata ccgggcgcga atgggaacaa catcgttgcc
     4681 ggcgtgaaag aacagaaaat gcaggaagag gacctcgaca tttataagcg ggtgcttcca
     4741 tcttccattg ccgcagccaa tgtaaccgac cacgccactg ttatctcttc catcatcggt
     4801 ggttccggaa atagatttta tgacggaagg ggaatcgcaa acgcatgccg gttctttcca
     4861 agcacattca gtaacctctt cgccgatgat tcaactattt taaatgcgaa tcatgtaact
     4921 gtacaaaatc attcttatgg aacagtcatc cagcaatttt atggtgccga ggccgtgagt
     4981 tatgatgaac aagcgtgggc gaacaaaaag atcatccatg ttttttcggc tggcaacgaa
     5041 ggaacgtcag cggcgactgg tggacagtat gcgaacatcc ccggttttgc aaaccttacc
     5101 ggcaatttca aaatggcaaa gaatgtgatc acggttggtg caatcgataa taacgaaaat
     5161 attccgcttc taagttctgc aggccctttg tatgatggca ggcttgcccc acagttaata
     5221 gcattaggcc caaacggaac ttctgatgct gccgcaatcg tgaccggaac tatcgcggtc
     5281 atgcaacagg tatatgccga cagtaacaac caatcgttac caccggcttc gctggtgaag
     5341 gcgcttttgt acaatacagc ggacgatgtg tatagcgatg ggatcgatta taaaaccggc
     5401 tttggtttgc tgaatagtta tgcggccata cgttcgctcc aaaaaaaaga atatgatagc
     5461 ggcaccgtaa cacaagatcg atcatggaca aaaacaattt cggtgccggc aggtgcagcg
     5521 caattgaaag tcacccttgc atggatcgat actcctgctt ctgcaaacaa caacagagcg
     5581 ctgatcaatg acctggatat gcaggtgacc tcgctggcgg atggatctgt ttacaaaccc
     5641 tgggtactca attcaacacc taatgctgat tcattgtcgc aaccaccaac caggagacga
     5701 gattcactta atacggccga acaagtgagc atagatctgc cggtggcggg caattataat
     5761 ataaaaatta ttggcacatc agtacaatct gcttcaatgc cttttcacat cgcttttcat
     5821 atggatactt tgaacacgtt tgcttttacc agtcctcaaa atacgtctga cattaggagt
     5881 gaggaacagc ccggtatttt cgtacgatgg aagactttcg ttgctgacag caatgaaaca
     5941 ggaaacctgt atatcagtta tgacaaagaa aaaagttggc agctaattca atcgtcgctt
     6001 aagatctaca ggaacgaata tttgtggacc gtaaaagata cgacgagcac gggcgtcttt
     6061 aaaatggaaa cttcattcgg cagtttttta tcgaagcaat ttatcattag cccggtaaca
     6121 agactatccg ttgattttgt gtgcgaagat
//
LOCUS       DASQJI010000538         5100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2062884,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000538 DASQJI010000000
VERSION     DASQJI010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5100
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2062884"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4566
                     /locus_tag="VEV83_14670"
     CDS             <1..4566
                     /locus_tag="VEV83_14670"
                     /inference="COORDINATES: protein motif:HMM:NF039534.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MopE-related protein"
                     /protein_id="HYK46418.1"
                     /translation="VLRNTSLNGIINFDSKADFTTAVANVDVTVADLDGDGKPDLASG
                     VSAANNVSLFRNTSSGIGNINFAAKVELPGFAGGGTTGAIAIHDIDGDGKPDIAFTNQ
                     TLNLLSIYRNTSVPGSLSFDTRIDMSGGSASRSIKMSDIDGDGKPDIVLATDIQTFQV
                     YLNQSTPGSISLAPKVSFVAGSGSSALSIGDIDGDGKPDVAVTNETSNSLSVLRNQST
                     PGSISFASKVDYALDNAPRGVTFGDIDGDGKIDVSVTCYNSSILSIFRNTSTAGSLAL
                     TKINFSTDANPRGIVFGDLNGDGKPDLAVANNGANTISIFQQDCLSPDVPTLNASSTN
                     NCGSQNTTLSIASGNLNNASNWQWYSGSCGGTSAGSGSSITVSPTVTTTYYVRGEGGC
                     VSPGQCASITITVSTPTTLYRDADGDGFGDPSITTQGCPTGGYVTDNTDCNDNDANVH
                     TAITYYRDFDNDGFGDLHNSTSICSSTPPPGYVTNSLDCDDTRALYEDLDGDGFGSTV
                     KVPCGVSNNTDCDDDDDVVHPVTWYRDNDVDGFGNPFITAQSCLPLPGYVLNNADCND
                     ADAFVHPGAAEICDGKDNDCNGIIDDGVKTTYYRDADGDGFGNPFVTTQSCTAPSGYV
                     SNNTDCDDSHATVYPGAPEFCDGLDNNCNGVVDEGVKQTFYRDADGDGYGNAAVTTQS
                     CAPPTGYVNNSLDCNDADGSVHPGAVEVCDGKDNDCNGLIDDGVKTTFYLDFDGDGYG
                     DYEMTIQACSMPAGYVTDHSDCNDNDASVHTPVTYYRDSDGDGFGNVNNTTSVCSSTP
                     PTGYVVNADDCDDTKVLYADNDGDGYGAGSPVVCGVPNNSDCNDADKTAHTAITYYKD
                     NDGDGFGDIDNTTTVCSSTPPTGYVANADDCDDATVLYADNDGDGYGAGSAVACGVAD
                     NSDCNDDDARVHTAITYYKDSDGDGFGDFNNTTSACSSNAPAGYTANGGDCDDRNANV
                     HPGAQEVCNGIDDDCDGLIDDADPSTDPSTKTAYYRDADGDGYGNPSIPILLCAPGAG
                     WVMDNTDCNDADASVHPGATEIADNNIDEDCDGSDLKTWYRDSDGDGYGNYAVSTTSN
                     TKPNGYVSNNFDCNDSNAQVHPGAQEVCNGIDDDCDGLIDDADPSTDPSTKTTYYRDA
                     DGDGYGDPSIPILLCAPGPGWVMDNRDCNDADASIHAGVTYYKDNDGDGFGNLNNTTI
                     VCSSVAPSGYVTNSSDCDDTKLLYKDADGDGYGAGSPVACGVANNTDCNDNDASMHSP
                     VQYYVDADHDGYGSSTTAMLCSSTAPFGYSTISGDCSDNSSSVHPGAVEICGNGIDDN
                     CNGSIDENCNVCANATALTTTSVTSTSATLNWVASVNPVQWNLQYKTTAPGAKWTDML
                     LAGSARSVTLSGLKSQQSYSWHIRAKCGTKWTSYSISASFKTTSALSVVAQSLNVDRP
                     DLKLYPNPSSGQFIVELRGLGKINSKVEIQLMDINGKTVQKENAELSNGSLQKIIRIA
                     PALSQGMYMVRIVINDKIYDARLIYSK"
     gene            complement(4812..>5100)
                     /locus_tag="VEV83_14675"
     CDS             complement(4812..>5100)
                     /locus_tag="VEV83_14675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46419.1"
                     /translation="PHVSLFVTCVLSIFIGLIIASAFSAILVYAQELLPGKVGMVSGL
                     FFGFAFGMGGLGSAVLGALADRTSIEYVYNVCAFLPLIGLLTAFLPDLKHT"
BASE COUNT         1483 a         1081 c         1246 g         1290 t
ORIGIN      
        1 gtgttgcgaa atacgtcgct gaacggtatt ataaatttcg atagtaaagc tgattttaca
       61 accgctgttg ccaatgtgga tgtcaccgtg gctgatctcg acggcgatgg caaacccgac
      121 cttgcttcag gtgtttcggc cgctaataat gtctcgctat ttcgcaatac ttcatcaggg
      181 atcgggaaca taaattttgc agcaaaagtt gagttgcctg gtttcgccgg cggcggaact
      241 acaggtgcga ttgccattca cgatatcgac ggcgatggta aacctgacat agcatttaca
      301 aatcagaccc tgaacctgct ttcgatttac aggaacacgt cggttccggg cagtctaagt
      361 tttgatacga gaattgatat gtctggggga agtgcatcgc gttccattaa aatgagcgac
      421 atagatggtg acggtaaacc ggacattgtt ttagcaactg atatacaaac tttccaggtg
      481 tatttaaacc aatcgacgcc aggatcaatt agccttgcgc caaaagtgag ctttgttgcc
      541 ggctcaggta gctctgcatt aagcatcggt gatatcgatg gcgatgggaa gcctgatgtc
      601 gctgtcacaa atgaaaccag taatagttta tctgtactgc ggaatcaatc aacacctggt
      661 tcaataagtt ttgcaagtaa ggtcgactat gcgcttgaca acgctccgcg tggagttaca
      721 ttcggagaca ttgatggtga tggtaaaatc gatgtatcgg tcacttgcta caacagtagt
      781 atcctttcta tcttccgcaa tacttctacc gctggctcac tggctctcac aaaaattaat
      841 ttttctacgg atgctaatcc aagaggaatt gtatttggcg atttgaatgg cgatggtaaa
      901 ccagacctgg ctgtggccaa caatggtgca aatacgattt cgatatttca gcaggactgc
      961 ctaagcccgg atgtaccgac tttgaatgcg tcttccacaa ataattgtgg cagtcaaaac
     1021 acaacattga gtattgcttc cgggaacttg aacaacgcaa gtaactggca atggtacagt
     1081 ggaagctgcg gcggtacaag cgcaggcagc ggaagttcaa ttaccgtgtc tccaacagtc
     1141 accacaactt attacgtgag aggtgaagga ggctgtgtat caccaggtca gtgtgcttct
     1201 atcacaataa cggtaagtac tccaacaaca ctttaccgcg acgccgatgg tgacggattc
     1261 ggcgacccgt caattacaac ccagggttgt ccaaccggtg gctatgtaac tgataacaca
     1321 gattgcaacg ataatgatgc aaacgttcac acagcgatca cttactacag agattttgac
     1381 aacgatggtt tcggagacct gcataattcg acaagtatat gttcatcaac tccgcctcct
     1441 ggttatgtta ccaatagcct cgattgtgac gatacaagag ctttatatga agatctcgac
     1501 ggagacgggt ttggttcaac tgtcaaagtg ccttgcggag tttcaaacaa taccgattgt
     1561 gatgacgacg atgatgtcgt gcatcctgtt acctggtaca gggacaatga tgtggatggt
     1621 ttcggtaatc cgtttataac ggcacaatcc tgtctaccgc taccgggtta tgtgcttaac
     1681 aacgcagact gcaacgatgc cgatgcgttc gttcaccccg gtgcagctga gatatgtgac
     1741 ggcaaagaca atgactgcaa tggaataatc gatgatggcg taaagacaac atattaccgc
     1801 gatgctgatg gcgacggttt cggtaaccca tttgttacca cacagagttg tacagcgcca
     1861 tccggttatg tgtcaaacaa taccgattgc gacgacagcc acgccacagt ttatccgggc
     1921 gcgcccgaat tttgcgatgg tttggataac aactgtaacg gcgtagttga cgaaggggtg
     1981 aaacaaactt tctatcgcga tgctgacggc gatggttatg ggaatgctgc tgttacaact
     2041 caatcatgtg ctccgccgac tggctacgta aataatagtt tggattgtaa cgatgccgac
     2101 ggctctgttc acccgggtgc agttgaagtg tgcgatggca aagacaatga ttgcaatgga
     2161 ctaattgatg atggtgttaa gacaacattc tatcttgatt ttgatggaga cggctacgga
     2221 gactacgaaa tgacgatcca ggcatgctct atgccagcgg gctacgtcac cgatcattcc
     2281 gactgcaatg acaatgacgc gagcgttcac acgccggtta cttactatag agacagcgac
     2341 ggcgatggtt tcggaaatgt gaataacaca acatccgtat gttcatcaac gccgccaacg
     2401 ggatatgtag tgaatgctga tgattgcgac gacacgaaag tattgtatgc agataatgat
     2461 ggagatggtt atggcgcagg ttcaccggtt gtatgcggcg ttccaaacaa ttcagattgc
     2521 aatgatgctg ataaaactgc tcatacagcc atcacctatt acaaagacaa cgatggagat
     2581 ggctttggag atatcgataa tacaacaact gtatgctcct caactccgcc aaccggctat
     2641 gtggcaaatg cagatgattg tgatgatgcg acagtgttgt acgctgacaa cgacggcgat
     2701 ggttatggtg caggttcagc ggtagcatgc ggggtcgcag ataattcaga ctgcaatgat
     2761 gatgacgcac gtgttcacac agcaattact tattacaaag acagcgatgg agatggattc
     2821 ggagatttca acaacacaac ttcagcatgt tcatccaatg ccccggcagg ctatactgca
     2881 aacggcggtg attgcgacga cagaaacgca aacgtccatc ctggtgcgca ggaagtttgc
     2941 aacggcattg acgatgactg cgatggatta atagatgatg ccgatccatc aacggatcct
     3001 tcaacaaaaa cagcatacta tcgggatgct gatggcgatg gttatggaaa tccttctatt
     3061 ccaattttgc tatgtgctcc cggagcgggc tgggtaatgg ataatacaga ttgcaatgat
     3121 gccgatgcca gcgtgcatcc tggggcaaca gaaatagcag acaataatat cgatgaagat
     3181 tgcgatggtt cagatctgaa aacctggtac cgggattcag atggagacgg gtatggcaac
     3241 tatgctgtca gcacaacaag caatactaag ccgaacggtt atgtatctaa caactttgac
     3301 tgcaatgata gcaacgccca ggtacatccg ggtgcgcagg aagtttgcaa tggcattgac
     3361 gatgactgcg atggattaat agatgatgct gatccgtcaa ctgatccgtc aacaaaaaca
     3421 acatactatc gggatgctga tggcgatggt tacggagatc cttctattcc aattttgctc
     3481 tgtgctcccg gaccgggttg ggtaatggac aatagagatt gcaatgatgc tgatgcaagt
     3541 attcatgcgg gcgttacgta ttataaagac aatgatggtg acggctttgg aaatttgaac
     3601 aatacaacaa ttgtatgctc atcggttgcg ccttcaggat atgtcacgaa tagttcggat
     3661 tgtgatgaca ccaaactttt gtacaaagat gccgacgggg atggctacgg tgcgggttca
     3721 cctgttgcgt gtggtgttgc aaataacacg gactgcaacg ataacgatgc gagtatgcat
     3781 tcaccggtgc agtattatgt tgatgcagat cacgacggat atggttcctc aacaactgcg
     3841 atgttatgtt catcaactgc tccttttggt tattcaacca taagtggaga ttgcagcgat
     3901 aacagttcaa gcgttcatcc tggtgcagtg gaaatatgcg gcaatggtat tgatgataat
     3961 tgtaacggat caatcgatga gaactgcaat gtttgcgcga atgcaacagc attaacaacg
     4021 acgagtgtaa cttcaacaag cgcgacatta aattgggttg cttcagttaa tccagtacaa
     4081 tggaaccttc agtataagac tactgcaccg ggcgctaaat ggaccgacat gttactagct
     4141 gggtcggcgc gctcggttac actttcggga ttgaagtctc aacaaagcta cagctggcat
     4201 atccgggcca aatgcggaac taaatggacg tcatattcaa tttcggcaag ctttaaaaca
     4261 acctcggccc tgtctgtagt tgctcagagc ctgaacgttg ataggccaga tttaaaattg
     4321 tatccaaatc caagcagtgg ccaattcatt gttgaattac gtggcctcgg aaaaataaac
     4381 agcaaggtag aaattcaact gatggatata aacggtaaaa cagttcaaaa agaaaatgca
     4441 gaattgtcga acggatcgtt gcaaaagatc attagaatag cacctgcatt aagccaggga
     4501 atgtatatgg tacgaatagt tataaacgac aagatctatg acgcgcgcct gatttattca
     4561 aaatgataag caaaacttaa ttgatcaaaa aaaataaata ggaatagtgc tcgctaacaa
     4621 aagcagcgat tggcggtgta tatctggatc aaagccttct caaaatttgg gagggctttt
     4681 ttatttgttg attggtttac tagtttattg ggtgatcagt taattggtgg cgagttccac
     4741 atgttaacac agaaatgtcc gtgtgctctg ctgtctcaac gcgaaaccga aaagagtttc
     4801 tttcttaagc gtcacgtgtg tttcagatca ggcaaaaatg cagtaagcaa tcctatcagc
     4861 ggaagaaagg cgcaaacgtt atagacatat tcaatgcttg ttctatcagc aagtgcgccc
     4921 aaaaccgccg aacccaatcc gcccattcca aatgcaaaac caaaaaataa tcccgaaacc
     4981 attcccactt tgccgggtaa taattcctgg gcataaacaa gtatggcaga aaaagcagaa
     5041 gcgattatca atccaatgaa tatgctaagc acgcacgtaa cgaatagtga aacgtgcgga
//
LOCUS       DASQJI010000539         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_64970,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000539 DASQJI010000000
VERSION     DASQJI010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64970"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VEV83_14680"
     CDS             complement(<1..227)
                     /locus_tag="VEV83_14680"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HYK46420.1"
                     /translation="MKIGFIGLGNLGTPIAVNLLEQTGELYVYNRTASKMEPLVSAGA
                     TPCSSVKDLAAACDIIFSIVADDAALNQITL"
     gene            345..683
                     /locus_tag="VEV83_14685"
     CDS             345..683
                     /locus_tag="VEV83_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46421.1"
                     /translation="MEQITDEYMQQMLAKTKTYTLMLLKPGPNVERDDVHKIIWEHGR
                     NNFKLRAEGLLSIVCPVGRESEIVGIGIFNADEDTVHERLQEDPAIKEGVFIYELLPV
                     RSFPGDALPK"
     gene            complement(760..1533)
                     /locus_tag="VEV83_14690"
     CDS             complement(760..1533)
                     /locus_tag="VEV83_14690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HYK46422.1"
                     /translation="MRSIWTGSVSFGLVNIPVKLYSATESSSLNLDMLDKKDHSNIKF
                     KRVNEKTGKEVAWEDIVKGYKIDNRYVILNDDDFKKASPEKTKTIDIVQFVESEEVPP
                     IHFESAYYLEPEKSGGKAYVLLRDSLAKSKKAALGTFVLRNKESLCLLAASEKILVLH
                     KIRYAQEIRSTEDIKVPEAKVSPAEVQMAVRLIDQMSAEFDVSKFKDTYSETLMKFIE
                     AKAKGKKFATAKLHVAHSTTKDLMEELKASLDQVKKKAS"
     gene            complement(1642..>2164)
                     /locus_tag="VEV83_14695"
     CDS             complement(1642..>2164)
                     /locus_tag="VEV83_14695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46423.1"
                     /translation="NRTSARGHIFCGINGTKNDCRMLFVTIPDNDLAKYSYMSAKLRE
                     LLLNLRTARKTLEGFANTCFDKSFAKCIHLFTSESLQCENEIASQIESLDGCPHYESI
                     PQQKCKPLAADKLLHMDSVCDFCENAYVDKYRQMLKDNHLGSSLKSLMQNHLRLFLSS
                     LTQLQQFTEAAVN"
BASE COUNT          577 a          490 c          482 g          615 t
ORIGIN      
        1 tccagggtga tctggtttaa ggccgcatcg tcggcgacta tcgaaaaaat gatgtcgcaa
       61 gcggccgcaa gatctttcac agaactgcac ggcgtagcac ccgctgaaac cagcggttcc
      121 atttttgagg cagtcctgtt gtagacgtag agctcgccgg tttgctcaag caagtttacc
      181 gcgatgggtg ttccaaggtt gccaaggcca ataaatccga ttttcattat acaggaattt
      241 aagttgagaa cgatgttcga tcattacaga actaagcatg agcaaaacca ccaggcgaaa
      301 agaaattgcg agacaagtta tcttagcgct gtaatcaaaa acacatggaa cagatcaccg
      361 atgaatacat gcagcaaatg ctggccaaaa caaaaaccta cacgctcatg cttctaaagc
      421 ccggtccgaa tgtcgaaaga gacgacgtac acaagatcat ttgggagcat ggaagaaata
      481 attttaagct ccgagccgaa ggcttgctat cgatcgtttg tccggtgggc cgtgaaagcg
      541 agatcgtcgg gatcggcatc ttcaatgcgg atgaagatac tgttcatgaa cgcctccagg
      601 aagatccggc gataaaagaa ggggttttta tttatgagct gctgcctgtg agaagctttc
      661 cgggagatgc actgcctaaa taatctgttg tgcatctgag gacattagtt agcgtcattc
      721 gcaaaaactg ttcgactttc caccgactgc catagttaat taagacgcct tcttcttgac
      781 ctggtccagg ctggccttca attcctccat cagatctttt gttgtgctgt gcgcaacatg
      841 aagcttcgct gttgcaaact ttttgccctt tgctttcgct tcaataaact tcatgagtgt
      901 ttccgagtac gtgtctttga atttagacac atcaaattca gcgctcatct ggtcaatgag
      961 cctaacagcc atttgcacct cagcagggct taccttagct tccggcactt ttatatcttc
     1021 tgtgcttctg atctcctgtg cataacggat cttgtgtagc acaaggatct tttcggatgc
     1081 agccagcagg caaaggcttt ctttattgcg cagtacaaaa gtacccaacg ccgctttctt
     1141 tgatttagcc aatgaatccc ggagcaacac gtaagcttta ccgccgcttt tttcaggctc
     1201 caaataatag gctgattcaa aatggatcgg cggcacctct tcgctttcca caaattgcac
     1261 aatatcgatg gtcttggttt tttccggact tgcctttttg aaatcgtcgt cgttcaggat
     1321 cacgtagcgg ttgtcaatct tataaccttt tacaatgtct tcccacgcaa cctccttccc
     1381 tgttttttca ttcacccgtt taaacttaat gttcgaatga tcttttttgt cgagcatatc
     1441 gaggttaagg ctgctcgatt ccgtggcgct gtataatttg acgggaatat ttaccagccc
     1501 aaaacttact gaacccgtcc agatagatct catagagaag aattttatga tgagacaatg
     1561 aaaatactgt gcctgtgaac ggataaagat acagattgta gaagcgcttc ctctaagtat
     1621 accaccaaaa agttaatcaa ctcaattaac tgcagcctct gtaaattgtt gaagctgggt
     1681 gaggcttgaa agaaataacc gcaaatggtt ttgcataaga ctcttcaatg aactaccgag
     1741 gtgattatct tttagcatct gccggtattt gtcaacataa gcgttttcgc aaaagtcaca
     1801 gacggagtcc atgtgcagaa gtttgtcggc tgcaagcggc ttacattttt gctgcggtat
     1861 gctttcataa tgcgggcagc cgtcaagcga ttcgatctgc gacgcgattt cattttcgca
     1921 ttgcagtgat tcggatgtaa aaagatgtat gcattttgca aacgacttat caaagcaggt
     1981 gttggcgaaa ccctctaatg ttttacgcgc agttcggagg ttaagaagca gttccctcag
     2041 tttggcactc atgtaagagt atttggccag gtcattatcc ggaatggtga caaatagcat
     2101 gcggcaatcg ttttttgttc catttatacc acaaaaaata tgcccccggg cgctggtacg
     2161 attt
//
LOCUS       DASQJI010000540         4866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_65270,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000540 DASQJI010000000
VERSION     DASQJI010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4866
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65270"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..128)
                     /locus_tag="VEV83_14700"
     CDS             complement(<1..128)
                     /locus_tag="VEV83_14700"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46424.1"
                     /translation="MKVLKFGGSSVANAENIQKVVGIIRSDDEAKIIVVSAFGGVT"
     gene            complement(228..1427)
                     /locus_tag="VEV83_14705"
     CDS             complement(228..1427)
                     /locus_tag="VEV83_14705"
                     /inference="COORDINATES: protein motif:HMM:NF025720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4407 domain-containing protein"
                     /protein_id="HYK46425.1"
                     /translation="MESNTHSLSQRESYSAPGFTRFLWWLSTAEKELIQDCTVDRNRY
                     AITGMAVLGTWLFATLAWTYFFSTVVDSTLIAILLGIFMGLIILSIDRALIKGITARN
                     KRKAGPILFRLLLAITIGTFMAQPALLYLFDKEIHVQISLDNEQRRMAKQHELDSLYG
                     PQVAEIQAQKNFLHQQIDSKYNEVAASRDAFIAETDGTGGSGRIGLKDIARAKETEYQ
                     KLYESYQQLNTSAQPKLASVDSALGAIDQLKQKEMRSFSTLMNDGFLTRIEALNHLVR
                     NNSAAQFRYYLLIIILVLIELMPVIAKSLLPDGTYDEKVRLKEIMEKQVIETNIRHEG
                     KLKEMYNRMAFEQDNEFIREFFDEARNERKQKMRERLQRWKENDNGSFDNLWESLKRD
                     VLTRQEN"
     gene            1610..1810
                     /locus_tag="VEV83_14710"
     CDS             1610..1810
                     /locus_tag="VEV83_14710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HYK46426.1"
                     /translation="MPSTVVAHYVYDRETSSLRITFTSGKVYNYKNVPEQIYQAMKES
                     FAKGIFFNQHIKDKYEFEKIEQ"
     gene            complement(1833..2288)
                     /locus_tag="VEV83_14715"
     CDS             complement(1833..2288)
                     /locus_tag="VEV83_14715"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYK46427.1"
                     /translation="MEQQSYLTELEFNPVLAGGGQRLLNYIIDLIFYYLLVILFFAVF
                     YSTGGAVDESGTGSGALLNLFFLGVYVLYMFLLEMLLKGRTIGKIITGTKAVNKDGTE
                     MEPGTIFRRTLCRLVPFEPFSGLGNICNPWHDKWTNTCVIDVKKSHLNL"
     gene            2596..3630
                     /locus_tag="VEV83_14720"
     CDS             2596..3630
                     /locus_tag="VEV83_14720"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium chain dehydrogenase/reductase family
                     protein"
                     /protein_id="HYK46428.1"
                     /translation="MKYTRIIVTHYGGPEAIQIIQEERPEPKEGELRVRVLAAGVSMP
                     DVMAREGVHPETPKVPYTPGWDLVGVVDSIGNGATEFQPGQFVAAMPIHGAYAEFICL
                     PEHELIPVPAGLDAAEAVSVVLNYITAYQMLHRSAKVKQGQRVLIHGASGGVGTAILQ
                     LGHLAGLEMYGTCSPRNASTVLQLGATPIDYHTEDIAKQIVRRTGDGADAVFDPMGGK
                     HIWDSRKALRRGGKVVVYGTTTSLRGGLSAKRSRRHRFHGMGIIGWYILRSWLLPGEK
                     RVVPYSIQTLKRLKPNVFRDDLVTLFELLKQNKIKPLIGHKFPLVEARQAQELLQKGG
                     VTGKIVLTMD"
     gene            complement(3659..3868)
                     /locus_tag="VEV83_14725"
     CDS             complement(3659..3868)
                     /locus_tag="VEV83_14725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYK46429.1"
                     /translation="MPIIVNLDVMMAKRKMSLNQLSEKVDLTLANLSILKTGKAKAIR
                     FSTLEAICKALDCQPGDLLEFVAKH"
     gene            complement(3871..4410)
                     /locus_tag="VEV83_14730"
     CDS             complement(3871..4410)
                     /locus_tag="VEV83_14730"
                     /inference="COORDINATES: protein motif:HMM:NF022636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HYK46430.1"
                     /translation="MKTKTKRILTILNVTSWIIFLGLCVKTGAILYSFFVSLVLNPPA
                     AENLHLGLDLSNLYQHDTGHYTVVVSLIIFLSGLKAYLFYLVVRIFMKINFVHPFSTE
                     VSVLISRISYVAIGIGLLTFCANGYCAWLTKQGVVFPDLQNYLGGAGEFLLLGAIIFM
                     ISQVFRKGIEIQSENDLTV"
     gene            complement(4658..>4866)
                     /locus_tag="VEV83_14735"
     CDS             complement(4658..>4866)
                     /locus_tag="VEV83_14735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HYK46431.1"
                     /translation="WKKLLAYMIIALLLFFLHRALSGLYQNTIFELGLAVILISLFAL
                     LIAKVEKKEFEQLPYVGGLVKRFL"
BASE COUNT         1382 a         1072 c         1097 g         1315 t
ORIGIN      
        1 tctgtaacgc caccaaatgc acttacgacg atgatcttgg cttcatcatc gctccgaata
       61 atgccaacta ctttttgtat attctcagca tttgcaacgg aagaacctcc aaactttaaa
      121 actttcatct cccagtaacg gtttaataat gtgctgtccg aaagttttaa agaaaaggtt
      181 ttttttgaaa ttggttgaaa ttttttgtga ttttgtgctt atgcccgtta gttttcttgt
      241 cgcgtaagaa cgtcgcgctt caggctttcc cataaattat caaagctgcc gttatcgttc
      301 tccttccagc gttgcagcct ctcgcgcatt ttttgtttac gctcattacg cgcttcgtcg
      361 aaaaactccc ggataaattc attgtcctgt tcgaaagcca tacggttgta catttctttt
      421 agcttgcctt catgccggat atttgtttcg atgacctgct tttccatgat ttccttcaaa
      481 cgtactttct catcgtaagt gccgtccggc agcagcgatt ttgcgattac cggcatgagc
      541 tcaatcagca ccaaaataat gatgagtaga tagtaacgga actgggccgc cgaattattt
      601 cggaccaggt gattcaatgc ttcgatgcgc gttagaaacc cgtcattcat caaagtgcta
      661 aatgaccgca tttctttttg cttaagttgg tcgattgcac caagcgcgct gtcaacactt
      721 gccagctttg gctgtgctga agtatttagt tgctgataag attcatagag tttttgatat
      781 tcggtctctt ttgcgcgtgc aatatctttt aagccgatcc tgccactgcc accggtcccg
      841 tcagtttccg ctataaaagc gtctcggctc gccgcgacct cgttgtattt ggaatcgatc
      901 tgttggtgca aaaagttttt ttgagcttgt atttccgcta cctgcggccc atataaacta
      961 tccagctcat gttgctttgc cattcttcgt tgctcattgt ccagcgatat ttgaacgtgg
     1021 atctctttat caaacagata cagaagcgcc ggttgagcca taaatgtgcc gatggttatt
     1081 gcaaggagca gcctgaacaa tatagggccg gcttttcgtt tattcctggc agttatacct
     1141 tttattaaag cacggtcgat gcttaggatg atcagtccca tgaatattcc aagcagaatt
     1201 gcgatcaatg tgctatcgac cacggtcgaa aaaaaatacg tccacgccag ggttgcaaac
     1261 agccacgtgc ctaacacggc catgccagtt atcgcatagc ggttgcggtc tacggtacaa
     1321 tcctgtatca gttctttttc tgcggtggaa agccaccata agaaccgcgt gaagccaggc
     1381 gcagaataag attcgcgttg agaaagcgaa tgggtattcg attccattga atagatttaa
     1441 attggtaaga ttattttggt aaggcgggga cgagctaata acgccaaaat tcgaaattga
     1501 ttatttcgga gaaaacattc catgaatttt aacgaaaggc ttcatcccgg caagtgcagc
     1561 agatcactta ccagctggca tattttttta tgcagatcct ggaaagcgca tgccatcaac
     1621 agttgtagct cattatgttt atgaccgcga gacgagcagt ttaagaataa cgttcacgtc
     1681 gggaaaggtc tacaattata aaaatgtgcc tgaacaaatt taccaggcaa tgaaggaatc
     1741 atttgctaaa gggatctttt ttaaccagca tatcaaagac aagtatgagt ttgaaaagat
     1801 tgaacagtag attaaacaga gtttatttta tgtcagagat tcaaatgcga tttttttaca
     1861 tcgattacac acgtgttcgt ccatttatcg tgccatgggt tacatatatt tcctaacccg
     1921 ctgaagggtt caaaagggac caggcggcat aaagtgcgcc ggaaaatagt gcccggttcc
     1981 atttcagtac catctttatt cacagctttg gtgccggtga taatttttcc gatcgttcgc
     2041 cccttcagca acatttctaa aaggaacata taaagaacat acacgccaag gaagaataaa
     2101 tttaataagg cacctgaacc ggtgcctgat tcatcaactg cacctcctgt agaataaaag
     2161 actgcaaaga agaggattac caggaggtaa taaaatataa ggtcaataat gtagttgaga
     2221 agcctttggc cgccgccggc aagcacagga ttgaattcaa gttccgttaa gtaggattgt
     2281 tgttccataa aaagcaatca gtttcgaata caagtataat acacaggacg aaaaactcaa
     2341 aacaatttta atgcgcgcca ggtttgatca aggttgtggc acatatcttt taaactgcag
     2401 cacggtcgtt gtttccaagc ctgaactgca aggtcttttc gtttgaccgg caactgatat
     2461 tgatcatagg attcgacctt tcgggtgagg taaatttgaa acattgaggg aggcgttgct
     2521 tacagttcgg aacccgacaa ggaaccgtac tgatcaagcc attactattg gcaagcggaa
     2581 agggaggaag agtccatgaa atatacgcgc atcattgtca cgcattatgg cggtccggaa
     2641 gcaattcaga tcatacaaga agaacgtccc gaaccgaagg aaggcgagtt gcgtgttagg
     2701 gtacttgcgg ccggcgtgtc catgcccgat gtgatggcgc gagagggcgt tcatccggaa
     2761 acgccaaaag tgccgtacac gccgggctgg gaccttgtcg gcgtcgtcga ttcgattggc
     2821 aatggtgcga ccgaatttca acccggccag tttgtggcgg caatgccgat acacggagcg
     2881 tacgctgaat ttatctgcct tcctgaacat gaactgatcc cggtgccggc aggcttagac
     2941 gcagcagagg ccgtaagtgt tgtgctcaat tacatcacag catatcaaat gttgcaccgt
     3001 tctgctaagg tgaaacaagg acagcgcgta ctcatccacg gcgcatctgg cggtgtagga
     3061 acagcaattt tacaactcgg tcatcttgcc gggctggaga tgtacggaac ctgctcaccg
     3121 cgaaatgcgt caaccgtcct gcaacttggc gcgacgccaa tcgactacca cacagaggac
     3181 atcgcaaagc aaattgtgcg gaggaccggt gatggcgctg atgcggtttt tgatccaatg
     3241 ggcggcaaac acatctggga ttcgcgtaaa gcgttacgtc gcggcggaaa agtggtggtg
     3301 tacggtacta ccacttcttt gcgtggcggc ttgtctgcaa aacgttctcg ccgccaccgg
     3361 tttcacggga tgggaatcat tggatggtac atccttcgca gttggttgct tcccggtgag
     3421 aaacgtgtcg taccatatag tattcaaaca ctcaagcggc ttaaaccgaa tgtcttccgg
     3481 gatgacctgg tcaccttgtt cgaattgcta aagcagaaca agattaagcc actcatcggg
     3541 cataaatttc cactggttga agcacgacaa gcgcaggagc tattgcagaa aggaggtgtt
     3601 accggaaaga tcgtactcac gatggattag gccttcttca taaaatgaat aaagcccatc
     3661 agtgctttgc aacaaactcg aggagatcac caggctgaca atctaatgct ttacaaattg
     3721 cttcaagtgt actgaagcgg attgctttcg ccttacccgt tttcaaaatt gagagattgg
     3781 ccaacgtgag gtccactttt tccgacaatt gatttaatga cattttgcgt ttggccatca
     3841 ttacgtcaag atttacgatg attggcatgg tcaaacggtt aagtcgtttt cagattgaat
     3901 ttcgatccct ttcctaaaga cctgcgagat cataaagatg atcgccccca aaagcaagaa
     3961 ttcgccggct cctcccaggt aattttgcaa atcgggaaat acaactccct gttttgtcag
     4021 ccatgcgcag tatccattcg cacagaaagt caaaagcccg atcccgatcg caacgtaact
     4081 gatcctcgag atcaatacag acacctctgt gctgaatgga tgcacaaaat ttattttcat
     4141 aaatatgcgc accaccaaat aaaagagata ggccttcaaa cctgaaagaa aaatgatcag
     4201 agatacaacc acggtgtaat ggccggtatc gtgctgataa agattcgaca ggtcgagacc
     4261 caaatgaagg ttttcagcgg ccggcggatt aagaacaaga ctaacaaaga atgaatagag
     4321 aatggctccg gttttgacgc ataagcccag aaaaattatc caggacgtaa cattcaatat
     4381 cgtgagaatg cgttttgttt tcgttttcat tttaatttgg tttctttgaa taagaagtgc
     4441 aaacataaaa tgcatttatt gaaaaacaat aaattattta tgctatttga taattatttt
     4501 ttaattatcg gtaaaaacaa ttttggcagc cgattccgtt tttggaaata attagggaga
     4561 aaagcttcaa cacaagccat caaagttgtg aacgcgcggc gcgggaattc acgaaacgga
     4621 ttgagataca tggaggccgg aagaaaactt gctattgcta caaaaacctt ttcaccagcc
     4681 cacctacgta aggcagttgc tcaaattctt tcttttcaac cttcgcaata agcaaggcaa
     4741 aaagcgagat caggatcacc gcaagaccaa gttcaaaaat tgtgttttgg tacaaccccg
     4801 aaagggcacg atgtaagaaa aataatagca acgcaatgat catgtatgca agcaacttct
     4861 tccacg
//
LOCUS       DASQJI010000541         1516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_834287,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000541 DASQJI010000000
VERSION     DASQJI010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834287"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1044)
                     /locus_tag="VEV83_14740"
     CDS             complement(37..1044)
                     /locus_tag="VEV83_14740"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HYK46432.1"
                     /translation="MKTFKTFVGIDISKLTVDVSVFHQHTTDQIHHFKAPNHLSGIKQ
                     LLKTLKQQKINLNETLFCCENTGIYTVPLITILGAASLHFWVVSAIEIKRSQGIARGK
                     NDQTDSKRIAFYAFTHLHKYEPSSLPQTEILQLKLLFTEREKVLKAIALFERTKENEG
                     FIDNSIFKLVKKINDRQIKQLRKTLRELEAKMQGLIESDVTLQTQFQLLKSIPGIGPQ
                     TALYLIITTKSFQGFKTWRQMACYAGVAPFEYSSGTSIRGKTKVNSLADKKMKSMLQM
                     CVLTAIKIDPEIKKYYQNKKQQGKASMLVMNNIRCKLLSRAFAVINRGTPFVSQQTIA
                     A"
BASE COUNT          424 a          262 c          291 g          539 t
ORIGIN      
        1 tcgcattcta tgatgaaatc caaataaaat tttagatcac gctgcaattg tttgctggga
       61 aacaaatggt gttcctctgt ttataaccgc aaatgctctt gataatagtt tgcacctgat
      121 attgttcatg accagcattg aagctttgcc ctgttgtttt ttgttttgat agtacttttt
      181 tatctccgga tcaattttaa tagcagttag tacacacatt tgtaacatcg atttcatttt
      241 cttatcagct aaggaattta cttttgtttt tccccggata cttgttcctg atgaatattc
      301 aaatggtgct actcctgcgt agcaagccat ttgtcgccag gttttaaaac cttgaaatga
      361 tttggttgta ataattaagt acagtgctgt ctgaggacca atgccaggaa tactcttcaa
      421 taactgaaat tgtgtttgaa gagtgacatc agattctatg agaccttgca tttttgcctc
      481 cagttctcta agtgtttttc gcagttgttt aatttgcctg tcattgattt ttttgacaag
      541 tttaaaaatg ctattgtcaa taaatccttc attttccttt gtccgctcga acaaggcgat
      601 cgctttcaat actttttctc tctcagtaaa tagtaattta agttggagga tctctgtttg
      661 tggaagtgag gacggttcat atttatgcaa atgcgtgaat gcataaaagg caatgcgctt
      721 agaatctgtc tgatcatttt tacctctcgc tataccctgg gatcgtttaa tttcaatagc
      781 agaaactacc caaaaatgca aactggctgc gccgagtatt gttatcagcg gaacagtgta
      841 tatgcccgtg ttctcacaac aaaacaaggt ttcatttaaa ttaatctttt gctgcttaag
      901 agtcttgaga agctgcttga ttccacttaa atgattgggt gctttaaaat ggtggatctg
      961 atcagttgtg tgctgatgaa aaacagaaac gtcaacagtg agttttgaga tgtcgatacc
     1021 gacgaatgtt ttaaacgttt tcattagatt tgtttttaag gaaaaaaata atgttgaatg
     1081 tctttagagc ctttagtaga cctctgatgt ctatcattct atctgaagca catacaacgt
     1141 tggttcaagg agaaggggca gaagactaat gcgacggatg gaactatttc attcatgcaa
     1201 atactttagt tcacttctgc ttctctcttt aaaaatttca tttaaatcta agtaaaggca
     1261 aatacttttt cgttacatgc catttttacg agattttagt gtcatggatt gtaggatatt
     1321 ggtagtttgc gatcaacgta cgatgccatc attgccggct tttgcatgcc ttacttatca
     1381 aaagaggata gtgcaaaatt tctacaagac tgtgctgggt tacttaaaaa aggcggtatc
     1441 ttttatttca gtactattaa aggtgattat gcaagctcag gttttgttgc cgcaagtaca
     1501 ggcgataaat cttatc
//
LOCUS       DASQJI010000542         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2829661,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000542 DASQJI010000000
VERSION     DASQJI010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2829661"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VEV83_14745"
     CDS             complement(<1..320)
                     /locus_tag="VEV83_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46433.1"
                     /translation="MVEIGNFFFKYRNWLFIVFYALLFVPYVPKLFTAEAFGERYYWW
                     PIIIGLVITVAGQAIRAATIGLAYIIRGGKDNKVYAEDLVTTGIFAHCRNPLYVGNIL
                     MIAGV"
     gene            complement(324..1052)
                     /gene="cmoA"
                     /locus_tag="VEV83_14750"
     CDS             complement(324..1052)
                     /gene="cmoA"
                     /locus_tag="VEV83_14750"
                     /inference="COORDINATES: protein motif:HMM:TIGR00740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HYK46434.1"
                     /translation="MSQDQVFKDEIRKASDFKFGKTVANVFDDMVNRSVPYYGEMQRM
                     IAELAADHAKEGTNVYDLGCSTGTTMIGMNTTVSESIQFVGVDDSPQMLDKCDAKLQE
                     AGFTRPYKLVTADLNNAVTIENASVVVLCLTLQFIRPIYRERLVSKIYDGLVEGGVLI
                     LVEKILAEESSFNRDFIKYYYDMKRRNHYSDLEISQKREALENVLIPYKLSEDNLLLR
                     ESGFAHVEIFFKWYNFAGLIAVKK"
     gene            complement(1206..1451)
                     /locus_tag="VEV83_14755"
     CDS             complement(1206..1451)
                     /locus_tag="VEV83_14755"
                     /inference="COORDINATES: protein motif:HMM:NF025005.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HYK46435.1"
                     /translation="MKKKLPPKNAIYLDTEALRMVNYSEDDGILEAKFDDDHTYWYKS
                     VPRRIWQEFLTVIHADLSAAAFLNKKIKPFYDCIEIA"
     gene            1832..>2116
                     /locus_tag="VEV83_14760"
     CDS             1832..>2116
                     /locus_tag="VEV83_14760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46436.1"
                     /translation="MRYRFAFVAVVLLSAFKGFGQDSSPDSALTSINGIIHTLYDAIS
                     GPVGHDRDWNVFRSLFAENARMYISVPDKDQGGTVLKSITPEEYADRNKTR"
BASE COUNT          577 a          488 c          456 g          595 t
ORIGIN      
        1 actcctgcga tcattaaaat atttcccaca tacaaaggat tgcggcagtg tgcgaatatg
       61 cccgttgtta cgaggtcttc agcatacact ttattatctt ttccgccacg aatgatgtat
      121 gccaacccta ttgttgcggc cctgatcgcc tgccccgcga ccgtgatgac aagaccgata
      181 attatcggcc accaataata acgttctccg aaagcttctg cggtaaataa ttttggaaca
      241 tacggcacaa agagcaaagc atagaagacg atgaacagcc agtttcgata tttgaaaaag
      301 aaattgccga tctcgaccat gaactatttt tttacagcga tgagcccggc gaaattatac
      361 catttgaaga agatctctac gtgagcgaat cctgattcac ggagcaggag gttgtcttca
      421 ctcagcttat aaggaatcaa tacgttttca agggcctcgc gtttttgaga aatttcaaga
      481 tcgctgtaat gattgcggcg cttcatgtcg taataatatt taataaagtc gcggttgaag
      541 gaactttctt ctgcgagtat tttttccacg aggatcagga caccgccttc caccagacca
      601 tcataaattt tactcaccag tcgttcccga tatattgggc gaatgaactg aagtgtcagg
      661 caaagcacca cgacggacgc gttttcaatc gtaactgcat tattcaggtc tgcggtcacc
      721 aatttataag gtcgggtaaa cccggcttcc tgcagcttag cgtcgcattt atccaacatt
      781 tggggcgaat cgtccacacc tacgaattga atgctttcag atacggtcgt gttcattccg
      841 atcatcgttg taccggtaga gcaacccaga tcatacacat tcgttccttc ttttgcatgg
      901 tcggccgcaa gttcagcgat catgcgctgc atttcaccat agtacggaac agaacggttt
      961 accatgtcgt cgaatacatt ggcgacggtt tttccgaact taaaatcaga tgctttcctg
     1021 atctcgtctt taaaaacctg gtcttggctc atacgcacga gttttgaacc tgcaaaaata
     1081 tcgaatacgc aacaaccagc ggtcagaaag ttatatgtgc tggcaaacgc agaaaaatgg
     1141 aatcgcacca atgagatata tagcggaaga gtaagcgttg ggatgaacaa gcgcgggcga
     1201 aatcattatg cgatctcgat acagtcgtaa aacggtttga tctttttgtt cagaaatgcc
     1261 gctgctgaaa gatctgcatg gatcaccgta agaaattcct gccatattct tctggggacg
     1321 cttttatacc agtaggtgtg atcgtcatcg aacttagctt caagtatccc atcatcttct
     1381 gagtagttta ccattctcag tgcctcggta tcgaggtaaa tcgcattttt aggcggaagt
     1441 ttctttttca tcgggttttc tttacatgta caaaaatttg tgccggaaat agccaccagc
     1501 aaaccagaat ccaatacaat tagttgtgta tttacaaact ggctcagaac ataatcctta
     1561 gctatgtgtc agtgagcgct atcgctattt tttgccttat acttttctga agatgatccg
     1621 cctgacgttt aaaacacgac aaagagcgaa gatataaacg gccggtctca gaatatgctc
     1681 aatcgagtga ttggcgctac cgaactgcgg gaaattcgac caaggcgcag gtcgtaatca
     1741 ggacacctct taatttaagg tctctttaag tatttttcct taaaccagga cgttagttac
     1801 gtatctcaca agcctaaatc ccatcagaaa aatgagatac agatttgcct ttgttgcagt
     1861 tgtgttgctg tccgcgttta aaggcttcgg gcaggattct tcccctgata gcgcgcttac
     1921 ttccataaac gggatcattc acacgcttta tgatgcgatc tccggccctg ttggtcatga
     1981 ccgcgactgg aatgtttttc gttccctttt tgcggagaat gcccgcatgt atatctcggt
     2041 tccagataag gaccagggcg gcactgtttt gaaatctatc acacctgaag aatacgctga
     2101 ccggaataag acccgc
//
LOCUS       DASQJI010000543         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2984045,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000543 DASQJI010000000
VERSION     DASQJI010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2984045"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..637
                     /locus_tag="VEV83_14765"
     CDS             <1..637
                     /locus_tag="VEV83_14765"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46437.1"
                     /translation="DNATSLQQTTDGGYVLGGWSQSGIGGDKTEESRGSDDYWIVKMG
                     CPPNTTVTPSGTLDICQKDFLMLHAYSADGCKYQWIKDNKIILGATDSMYASTRPGIY
                     RVLVYTRKLCADISKPIKIISSCNRSNDISIYPNPSHGNVTLTYNSTNLGSVQLNVYD
                     KTGRMMLSKIETAIEGSNTYRLDLSRLINGVYSVQVINRNDQSQVTVVIEK"
     gene            complement(1118..1432)
                     /locus_tag="VEV83_14770"
     CDS             complement(1118..1432)
                     /locus_tag="VEV83_14770"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK46438.1"
                     /translation="MTTNPNRNVMYCGVTNDLPQRIIEHYLSRGDHRSFAGKYYCYFL
                     LYYESFVYVNDAIAREKEVKKWRREKKEALIMSFNPEKKFLNLELFDTWPPKEMLHRK
                     DL"
     gene            1749..>2077
                     /locus_tag="VEV83_14775"
     CDS             1749..>2077
                     /locus_tag="VEV83_14775"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6597 domain-containing transcriptional
                     factor"
                     /protein_id="HYK46439.1"
                     /translation="MKYSQVKPDKSLENYIDAYWTATGDSINTATEKILPDGCIDIIF
                     NLGSDCITDNGAFNMQSEKVSLVGTMTRYKETIMHNETRLIGVRFKPAGFSAFHKFSS
                     LHEIKDKT"
BASE COUNT          593 a          468 c          457 g          559 t
ORIGIN      
        1 cgataatgca acttcccttc agcaaacaac agacggaggt tacgtcttgg gaggctggtc
       61 tcagtctggc atcggcggag ataaaacgga agaaagccgt gggagcgacg attactggat
      121 cgtgaaaatg ggttgcccac caaatacaac cgttactccg tccggcactt tagacatttg
      181 ccaaaaagat tttttaatgt tacatgcgta ttcggccgac ggctgcaaat accaatggat
      241 aaaggacaat aaaataatcc ttggggcaac agacagcatg tatgcgtcga cccgaccggg
      301 catctatcgt gtgttagttt atacaagaaa gctttgtgca gatatttcga aaccgataaa
      361 aattatttca tcatgcaacc gatcaaatga catttcaatc taccccaatc catctcacgg
      421 caatgttacg ctcacttaca acagcacaaa cttaggttct gttcagttga acgtgtatga
      481 taaaaccggc aggatgatgt tatcgaaaat agagacggca atagaaggca gtaacactta
      541 ccggctggat ttgtcgcgcc tcattaacgg ggtttacagc gtccaggtaa ttaaccgcaa
      601 tgatcaaagc caggtaaccg tggtgattga aaagtaagat taggttttaa tgtttgttgt
      661 gaattggaca tcaaggtgaa tttcgtaaaa aaactttcat gccttcttgg tcaaccgcga
      721 cccctgtcat ctcggcgaag gagaggtctg caacgcattc gtcatgcgcg gttccgtatt
      781 cctcgctagg ggcgtgcgcc ctgtcattcc gagtgaatat gtattctacg taaacgaaag
      841 tcccccaacg aggaatctgc aaggcattcg tgatccgcta ttttgcgttg cggattcctc
      901 gctaggcgcg ttctgtctcc gtcgttacga tgatcactcg gaatgacagc actcgaaatg
      961 aaagggatta gaatccggca atggcactcc caacgaagga gagatctgca acgcattcgt
     1021 catccgcggt tccggttagg agcgtgcgtc ctgtcattcc gagtgaatat cattctacga
     1081 agagtaaaac tttccgaacc aggaatctgc aacgcatcta cagatccttc ctatgaagca
     1141 tttctttcgg aggccacgta tcaaacagct ctaaattcag aaattttttt tcgggattaa
     1201 acgacatgat cagagcttct ttcttttccc gtctccattt cttcacttcc ttctcacgtg
     1261 caattgcgtc attcacgtaa acaaacgatt cataatacag caggaaatag cagtagtact
     1321 tgcctgcaaa agatctgtga tctccacgac taaggtaatg ttcgataatt cgctgaggta
     1381 agtcgtttgt tacgccgcaa tacataacat ttcgattggg gttcgtggtc atgtaaaaat
     1441 agtagggtcg aaacatcatg aaagttgcaa gttcttccgt ttgtgtcgct tggtgctgtt
     1501 gatcctcctt gggacgccgc acctatcatt ccgagtgaat atctattcta cgaaaaatga
     1561 aacttcccca acgaggaatc tgccacgcat tcatcatccg ccattttgcg ttgcggattc
     1621 ctcgttaggt gcgttctgtc tccgtcgtta tgatgaacac tcgaaatgac agaggtgccc
     1681 acctttcatc gacgttaaga gtcttgcata tctttgttgc aataaaggca aattgcaaag
     1741 cgtcagctat gaaatactcc caggtaaagc cagacaagtc attagaaaat tatattgacg
     1801 cttattggac cgcaaccggc gactcgataa atacggcaac tgaaaaaata ttgcccgatg
     1861 gctgtattga catcattttt aatcttggga gcgactgcat aacagacaac ggagcattta
     1921 acatgcagag tgagaaagtt tctttagttg gaacaatgac gcggtataaa gaaaccatta
     1981 tgcacaatga aaccaggcta attggagttc gttttaagcc cgctggtttt tctgcatttc
     2041 ataagttctc atcacttcac gaaataaaag acaagac
//
LOCUS       DASQJI010000544         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_679452,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000544 DASQJI010000000
VERSION     DASQJI010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_679452"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..961)
                     /locus_tag="VEV83_14780"
     CDS             complement(11..961)
                     /locus_tag="VEV83_14780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase family protein"
                     /protein_id="HYK46440.1"
                     /translation="MKNIKISTAQFEHKSGDKKYNLGVIDKLSAKASADGAQVVCFHE
                     CSISGYTFARHLSKEQMLDVAECIPQGESIEALTRIAAKNDIAILAGLFEKDQHENLF
                     KATVCVDENGLVAKFRKLHPFINPYLIPGDSYCVFELHGWKCGILICYDNNIIENVRA
                     TKLLGADIIFMPHVTMCTPSTRPGAGFVDAKLWGNRETDPTSLRLEFDSMKGRDWLMK
                     WLPARAYDNAAYVVFSNPIGMDDDQLKNGCSMIIDPYGDIIAECRTLGDDIVTATISE
                     DKLTKAGGYRYIKARRPELYRDIIGKPHKSEQKVVWLNME"
     gene            1128..>2213
                     /locus_tag="VEV83_14785"
     CDS             1128..>2213
                     /locus_tag="VEV83_14785"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK46441.1"
                     /translation="MATAFPIIDWGNGTNIYEVNVRQYTREGTFKAFIEHIPRLKNMG
                     VDILWLMPVTPISAEKRQGTWGSYYAASSYTNIDPAYGSEEDFKELIRTAHFFDMKVI
                     IDWVANHTGYDHVWTKEHADWYRKDEHGNFTELYGWVDVIDLNYEIPALRDGMIAAMK
                     YWVKTFDIDGFRCDMARTVPIDFWIEARAECDAVKRLFWLAECEILNYHEAFDLTYGW
                     EGMRAFDKYFKDELKFDEIRSILINYSHYPIGSRKLLFTSNHDENTYYGTEYEKYGVC
                     AKAMAVFTCTWPGIPLIYSGQEKPNLKRLEFFEKDFIDWEGEVELHGFYKTLLTIRKK
                     NKALQESASVLLLQTDQPEVLLYLCRRQ"
BASE COUNT          605 a          476 c          514 g          618 t
ORIGIN      
        1 tggcaacgct tcattccata ttcagccaca ctactttttg ttcagattta tgcggcttgc
       61 cgatgatgtc tctgtacaat tcaggccgcc ttgctttaat atatctgtaa ccgccggcct
      121 ttgtaagctt atcttcgctg atggttgcag tcacgatatc gtcacccaat gttctgcatt
      181 cagcaattat gtctccatag ggatcaatga tcatggagca accattcttc aactggtcat
      241 cgtccatgcc gataggattg gagaacacaa catatgcagc attatcatag gctcttgccg
      301 gcagccattt catcagccag tctcttcctt tcatactgtc gaactcaagg cgaagcgatg
      361 ttgggtcagt ctcacggttt ccccagagtt ttgcatcgac aaagcctgcg cccgggcgtg
      421 tggagggtgt acacatcgtt acgtgcggca tgaatatgat gtcggcgccc agcaatttcg
      481 tagctcttac gttctcaata atgttgttgt catagcagat aagaatgccg catttccagc
      541 catgcaattc gaaaacacaa tacgagtcgc ctggaattaa ataaggattg atgaacgggt
      601 gcagttttct gaacttagct accagcccat tttcatcgac gcaaacggtt gctttaaaca
      661 aattctcgtg ctggtctttt tcaaatagtc cggcgaggat agcaatatca ttttttgcgg
      721 ctatccttgt caaggcttca atactttcgc cctgcggtat acattctgcg acatccagca
      781 tctgctcctt tgataagtgg cgcgcaaatg tgtagccgga gatggaacat tcgtggaagc
      841 aaacaacctg tgctccgtca gctgaagctt tcgctgaaag tttatcgata acacccaggt
      901 tatatttttt gtctccgctt ttatgttcaa actgtgcagt agaaatcttt atatttttca
      961 tatcgatgtt ttctaagtgc cataaaaata aatttaaaaa tcaaaactta agtggcatgg
     1021 gcttttgagg cccactaaat cgtgggcgcg taaactcgtg aactcgtgaa ctttcgaact
     1081 caagcgaacc gttggtataa aacttgtctt tctaaacaca aaaatgcatg gctacagctt
     1141 ttccgattat tgattgggga aatggcacta atatttacga ggtcaacgtg cggcaatata
     1201 cgcgtgaagg cacattcaag gctttcattg aacacattcc cagattaaaa aatatgggtg
     1261 ttgatattct gtggctcatg cctgtcacgc cgatcagcgc ggaaaaaagg cagggtacat
     1321 gggggagcta ttatgcggcg agctcgtata ccaacatcga tccggcctat gggagcgaag
     1381 aagactttaa agagctgatc cgcaccgctc atttttttga catgaaagtg atcatcgact
     1441 gggtagctaa ccacacgggg tacgatcatg tgtggacaaa agaacatgcg gactggtaca
     1501 gaaaagatga gcacggaaat tttacagaat tgtatggttg ggttgatgtg atagacctga
     1561 attacgagat acctgcattg cgggatggca tgatcgccgc gatgaagtat tgggtgaaga
     1621 cttttgacat cgatggcttc cgctgcgata tggcgcgaac ggtgcccatt gatttctgga
     1681 tcgaagcaag agccgaatgc gacgcggtga aacgtttgtt ctggctcgct gaatgtgaga
     1741 tactgaatta ccacgaggca ttcgatctta cctatggctg ggaaggcatg cgcgcattcg
     1801 acaaatattt taaggatgag ctaaaattcg atgaaataag atccatactc attaactatt
     1861 cacattaccc gatcggttcg agaaaattat tgtttacctc gaatcatgat gaaaatacct
     1921 actacggcac tgaatatgaa aagtacggag tgtgtgccaa agcaatggca gtgttcacat
     1981 gtacgtggcc cggcattccg ttaatttatt caggtcagga aaagccgaat ctgaaacgtc
     2041 ttgaattttt tgaaaaagat ttcattgatt gggaaggtga agttgaattg cacggctttt
     2101 ataaaacact gcttacgatc cgcaaaaaaa acaaggcatt gcaggaaagc gcgtctgtgc
     2161 tattgttgca gacagatcaa ccggaggtgc ttctctacct ctgccggcgt caa
//
LOCUS       DASQJI010000545         5352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2216419,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000545 DASQJI010000000
VERSION     DASQJI010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5352
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216419"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="VEV83_14790"
     CDS             <1..727
                     /locus_tag="VEV83_14790"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK46442.1"
                     /translation="DAMAANKGTTDSIYQAALQNLAIVKAAELHRRSAVYGVKTYRSL
                     RYPSVYMTGGLFTNYSSNATTQEYVNTTEITTSNYVLVDGSKLPVVVPQDNYTTQKIN
                     YGSQFTNNFNTSISIGIRIPLLNNLQNKSQIKTAILQQKDAEISLQTTKTQLQQNIEQ
                     AYVNMIAAQNRYTVLTDQVNAFKESFREAEIKFNAGAITSVDYLVVRNSLDRSNINLV
                     IARYDYVLRAMILDYYSGKLTFQ"
     gene            941..1225
                     /locus_tag="VEV83_14795"
     CDS             941..1225
                     /locus_tag="VEV83_14795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46443.1"
                     /translation="MKLPTLILPYVLSCLVYCGCNNNTSTSDSAATDTTSTNPTENAE
                     DYHPDQRQHIPATDSSNVVGTDTINASEATPNTGTVKSANDQKAAKDTTK"
     gene            complement(1317..2630)
                     /gene="xylA"
                     /locus_tag="VEV83_14800"
     CDS             complement(1317..2630)
                     /gene="xylA"
                     /locus_tag="VEV83_14800"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0009045 - xylose isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA];
                     GO_process: GO:0042732 - D-xylose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HYK46444.1"
                     /translation="MAKEFFPGIDQIKFEGLDTDNPLAFRWYDENKIVAGKSMKEYLR
                     FACAYWHSFCNVGSDPFGEGTHLFPWNEKQDPVARAKDKMDAAFEFMGKMNLPYYCFH
                     DVDVVDFTNDVLDNEKRLQALVDHAKQKQQDTGVKLLWGTANLFSNRRYMNGAATNPD
                     FHVLAHGAAQVKAALDATIALNGENYVFWGGREGYMSLLNTNMKREQEHLAMFLHKAK
                     DYARANGFKGTFFIEPKPCEPTKHQYDYDAATVISFLRQFDLLDDFKLNIEVNHATLA
                     GHTFTHELQVAADAGLLGSIDANRGDYQNGWDTDQFPNNINELVEAMLIILEAGGFAG
                     GGINFDAKIRRNSTDLADLFYAHIGGMDTFARALITAENILKDGEYSRLRKQRYASFD
                     EARGKKFEQGDLSLDDLRQYAIDNGEPKSTSGRQEYFENLVNKFI"
     gene            complement(2720..4243)
                     /locus_tag="VEV83_14805"
     CDS             complement(2720..4243)
                     /locus_tag="VEV83_14805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HYK46445.1"
                     /translation="MLLLGIDVGTSSVKVSVVDAESRQRVVSAQYPETEAEIISLQNG
                     WAEQNPDSWWEYLQHALMEANVSGKYDPKEIAAIGIAYQMHGLVVVNKAQLPLRHSII
                     WCDSRAVPYGDKAFHEIGEERCLTCLLNSPGNFTASKLAWLKEHEPGTFKQIHRIMLP
                     GDFIAMRLTGDITITPSALSEGVFWNFEEDALSNEVMHHFGFKKNIIPEIKDVFSTHG
                     FLRKEVADKLGLKQGIPVSYKAGDQPNNALSLNVLQPGEVAATAGTSGVIYAVADSLV
                     YDPQSRINSFAHVNYKTPIMFEHAREAVIEKRIGVLLCINGTGIMNSWAKRLMGADRS
                     YNDLNKDAASIPAGSDDLMIFPFGNGAERMLNNKIVGSSIRNIDLNKHTPLHIYRAAQ
                     EGIAYAFRYGLDIMRENNINPSVIRAGRANMFLSDIFTDAFVNATNVPVELYESDGSV
                     GAAIGAGIGAKIFADEKEAFKNMKRLKVIEPNGRQEYERHYEKWKAILLTDLEETAN"
     gene            complement(4348..>5352)
                     /locus_tag="VEV83_14810"
     CDS             complement(4348..>5352)
                     /locus_tag="VEV83_14810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HYK46446.1"
                     /translation="ANISNFGGDANNVTIFGQSGGGAKVNTLMAMPSAKGLFQKAINE
                     SGSFRTDLVDKSTTQEIAAEVLNALNLQPNQADSLQTIPFAQLAAAGKKALKIVGDKL
                     KAQGKQVGLLNFGLSWGPSVDGEDIPYQVFSKEAFELSKDVPLLIGTVKNEFMPSLFT
                     NMSNATSDEVNAYIKKQYADRADAYVAAVKKAYPNDTRPTDLIDVDVRFRPGAVSQAN
                     EKSALNAAPVYVYLFTWQSPVLDGKYKAIHCMELPFVFNNIQLCEEMTGGTKEAYALA
                     DKVSKAWISFARTGNPNHKGLPNWPAYNATNTATMHFDNQCTVEPQLDKELFDIVSQK
                     "
BASE COUNT         1444 a         1336 c         1077 g         1495 t
ORIGIN      
        1 ggatgctatg gcggcaaata aaggcacgac agattcgatc taccaggccg ccttacagaa
       61 tttggcaatc gttaaggctg ccgagttgca caggcgaagc gcagtttacg gagttaagac
      121 ttaccggtcg ctgagatacc cttccgttta tatgaccgga ggattattta caaactattc
      181 cagcaatgca accacccagg aatacgtaaa caccaccgaa ataaccacat ctaactacgt
      241 actagttgac gggtccaaat taccagtcgt ggtaccacag gacaactata cgactcaaaa
      301 aataaattac ggaagccagt tcacgaacaa cttcaacacc tctatcagca tcggcatccg
      361 gatcccatta ttgaataacc ttcaaaacaa aagccagata aagactgcta ttctgcaaca
      421 aaaagatgcg gagatcagcc tgcagacaac gaaaactcaa ctgcaacaaa atatcgagca
      481 ggcgtatgta aacatgattg ccgcccaaaa tcgttacact gttcttacag accaggtaaa
      541 tgcttttaaa gaatcatttc gcgaagcaga aattaaattc aatgccggcg caatcacttc
      601 ggtggattat ctcgtagtac gaaacagcct tgaccggtca aacatcaacc tggttatagc
      661 caggtacgac tatgtgttgc gcgcaatgat cctcgactac tatagtggca agctcacctt
      721 ccagtaaatg tgcatcaagt tgtagaaaaa tattgccaat aatcacgcat actgcctctt
      781 aaagtcttcc cttctctgct aattagaact ggcacatctt tggtacgttt agactgaaca
      841 gcatttgata agtaactttt tttacaaatc ctgagtaatg gttacgggcc atgtctatgg
      901 tccgtttttt tttcaataac gtttcggact cgattgtaat atgaagctgc caacattgat
      961 actcccctat gtgcttagct gcctggttta ttgcggttgt aacaataaca catcaacttc
     1021 tgattcagcc gccacagata cgacgagtac aaacccaacc gaaaatgcgg aagattatca
     1081 tcccgatcaa aggcaacaca tacctgcaac agattcatca aatgtagtgg gcacggatac
     1141 gatcaatgca tcggaggcta cacctaatac tggaacggtc aagtctgcca atgaccaaaa
     1201 agcagcgaaa gacaccacaa aatgagttaa cctgtgtcat cataaatgag aaaagaggct
     1261 gaagtttaaa acagcctctt tttaattttt aagcctcgcc agaatctggc aagcatttaa
     1321 atgaatttgt tcaccaggtt ttcaaaatat tcctgccttc cactcgtgga ttttggttca
     1381 ccgttgtcta tcgcatattg cctgagatcg tccagtgaca gatcgccttg ctcaaatttc
     1441 ttccctcttg cttcatcgaa cgaagcataa cgctgtttac gcagccggct gtattcgcca
     1501 tctttcaaaa tgttttccgc tgtaataaga gccctggcaa acgtatccat cccgccaatg
     1561 tgcgcgtaaa agagatcggc aagatctgtc gagttacgcc tgatcttagc gtcgaagtta
     1621 ataccgccgc ccgcgaaccc gcctgcttca aggatgatca gcatagcttc cacaagttca
     1681 tttatattgt tgggaaattg gtcagtgtcc caaccatttt gataatctcc gcgattcgca
     1741 tcaatactgc ctagcaagcc cgcatccgca gcaacctgca gttcgtgggt gaatgtgtgg
     1801 ccggccagcg tggcatggtt tacttcaata ttcagtttaa aatcatcgag cagatcgaat
     1861 tgccgcaaaa agctgataac agttgctgca tcataatcat attggtgttt tgtaggctcg
     1921 catggtttcg gttcgataaa gaatgtgcct ttgaaaccgt tagctcgtgc gtagtccttc
     1981 gccttatgca gaaacatcgc aagatgttcc tgttcacgtt tcatatttgt gttgagcaag
     2041 ctcatgtaac cttcgcgccc tccccaaaaa acataattct caccattcaa tgcaatagtt
     2101 gcatccagtg cagcctttac ctgcgcggct ccatgagcga gtacatgaaa gtcaggattc
     2161 gtagcagcgc cattcatata cctcctgttc gaaaaaagat tcgccgttcc ccacagcaac
     2221 ttcacgccgg tgtcctgctg cttttgtttt gcatgatcga ccagcgcttg taaacgcttt
     2281 tcattatcca aaacatcatt tgtaaaatcc actacatcca catcgtgaaa gcagtagtat
     2341 ggcaggttca ttttacccat aaattcaaac gcagcatcca ttttgtcctt tgcacgtgcg
     2401 acggggtctt gtttttcatt ccatggaaat agatgagttc cctcgccaaa gggatcgctg
     2461 ccaacgttgc agaatgagtg ccagtaggca caggcgaagc gcaaatattc tttcattgac
     2521 ttgcctgcga cgatcttgtt ttcatcatac caccgaaatg caagaggatt atccgtgtca
     2581 agaccttcaa acttgatttg gtcaataccg ggaaaaaatt ctttagccat atatgtttgt
     2641 gtttttgtag agcgctgttg tcgttctaaa cttttaactg ctcgtttcca ttgacaaact
     2701 cgtcagagga accttcgtat cagtttgcgg tttcttctaa atcagtcaat aaaattgcct
     2761 tccatttttc ataatgcctt tcatactcct gcctgccatt cggctcaata actttcaatc
     2821 gcttcatgtt tttaaatgcc tctttttcgt cggcaaaaat ctttgcacca atgcctgcgc
     2881 cgatcgcagc accgacgctt ccatcgcttt catacaactc aaccgggacg ttcgttgcgt
     2941 taacaaacgc atcagtgaaa atatcactta aaaacatatt tgctctgccg gcccgaatca
     3001 ctgacggatt tatattgttc tcccgcataa tatccagacc ataacgaaac gcataggcaa
     3061 tcccttcctg cgctgcccgg taaatgtgga gtggggtatg tttattcagg tcgatattac
     3121 gaattgacga tccaacgatc ttgttattga gcattctttc cgcgccatta ccaaaaggaa
     3181 agatcatcag atcatcgctg cccgcaggta tcgaagcagc atccttatta agatcattgt
     3241 agctacggtc agcgcccatc aatctttttg cccaactgtt cataataccg gttccgttga
     3301 tacacagcaa tacgccaatt cgtttttcaa tcaccgcttc cctagcatgc tcaaacatta
     3361 tcggcgtttt atagttcaca tgggcgaaac tattgatcct gctttgcggg tcgtaaacta
     3421 aagaatcagc gacggcatag ataacgcccg atgttccggc agtagccgcc acctcaccgg
     3481 gttgcagaac atttaatgaa agtgcattgt ttggctgatc gccggcttta tagctcacag
     3541 gaattccctg cttcaagcca agcttatcag caacttcctt tcgcaaaaaa ccatgcgtgc
     3601 taaaaacgtc ttttatttca gggatgatat ttttcttaaa accgaagtga tgcattacct
     3661 cattggataa cgcgtcttct tcaaagttcc aaaaaacgcc ctcggaaagg gctgatggag
     3721 tgatcgtaat gtcaccggta agcctcatcg cgataaagtc gccgggcaac attatcctgt
     3781 gtatctgctt gaatgtccct ggctcatgct cttttaacca ggcgagtttg gatgcagtaa
     3841 aatttccggg tgagttcaaa aggcaggtca ggcacctttc ctccccgatc tcatgaaatg
     3901 ctttgtcgcc gtacggtact gcacgactgt cgcaccagat tatgctgtgg cgcaacggaa
     3961 gctgggcttt gttgacgaca accaggccgt gcatctggta agctatcccg atcgcggcga
     4021 tctccttcgg atcgtattta ccggaaacat ttgcctccat caaagcatgt tgcaaatact
     4081 cccaccacga gtcgggattc tgttcagccc aaccgttttg cagactaatg atctccgctt
     4141 cggtttcagg gtattgtgca gacacgaccc gttgccggga ttctgcatca actaccgaga
     4201 ctttcacaga cgatgttcct acatcaattc caagcaacag cattagaaaa atttagagga
     4261 acgaatgtag aaattatgtt tgaagttcaa acgtccaaca tggaagtttg atttttatag
     4321 aacggtaaca aattttttta tcagaaatca tttttgagaa acgatgtcga agagctcctt
     4381 atcaagttgt ggctcaaccg tacactggtt gtcaaaatgc atcgtcgccg tatttgttgc
     4441 attgtaggcc ggccagttcg gcaagccttt atgatttgga tttccagtgc gtgcaaaact
     4501 tatccatgcc ttgctcactt tatcagctaa cgcatacgct tcctttgtac cgccggtcat
     4561 ttcttcgcac aactgaatat tgttgaacac gaatggcaac tccatgcagt gaatagcttt
     4621 gtattttccg tccaggacgg gggattgcca cgtaaataag tacacgtaaa cgggcgccgc
     4681 attcaatgca gatttctcat ttgcctgcga aacggcaccg ggacgaaacc gcacatcaac
     4741 atctatcaga tccgttggtc tcgtatcgtt tggatacgct ttcttcaccg ccgccacata
     4801 ggcgtccgca cgatcggcgt attgtttttt gatgtaggca ttcacttcat cactcgttgc
     4861 attgctcata ttcgtaaaca aagacggcat gaactcattc ttgactgtgc cgataagaag
     4921 cggaacatct ttcgacaatt caaatgcctc ttttgaaaat acctggtaag gaatatcttc
     4981 accatcaaca ctcggccccc agcttaaacc aaagttcaac aagccgacct gctttccctg
     5041 tgccttcaac ttatcgccga caatcttcag cgcctttttt cctgcggccg ctaattgtgc
     5101 aaaaggaatg gtctgcaaac tatcggcctg gttcggttgc agatttaatg cgttcaacac
     5161 ttctgccgcg atttcttgtg ttgtgctttt atcaaccaga tctgttctga acgagccact
     5221 ttcattgatg gccttttgaa aaagtccttt cgctgacggc atcgccatca acgtatttac
     5281 ttttgcgccg ccaccagatt gaccgaagat cgttacgttg tttgcatccc cgccgaaatt
     5341 tgaaatattc gc
//
LOCUS       DASQJI010000546         3246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_526282,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000546 DASQJI010000000
VERSION     DASQJI010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526282"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VEV83_14815"
     CDS             complement(<1..629)
                     /locus_tag="VEV83_14815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46447.1"
                     /translation="MDIREYIQSGAIEAYVLGLATDEEIAELERLRRMHPELKQAIDQ
                     FEVALEKHAFENTVDPPARVKTFLNASLRDDFILSEREKPNRAEDVTPFIAPDQKRRT
                     DTYWKYLAAASIILLLTSTALNFYFYSNFRNSSDKYQALLTERNTLQADNKVYESRLN
                     NIEQSLKLMEDPRMISIKMPGMPGKEQNLATVFWNTQTKEVYLYPNSMA"
     gene            complement(630..1172)
                     /locus_tag="VEV83_14820"
     CDS             complement(630..1172)
                     /locus_tag="VEV83_14820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK46448.1"
                     /translation="MAGALKYTEPELVTLLQERSQTAFNYLYDNYSGALYSVILSILM
                     DKELAADVLQEVFVKIWRQIEQYDAEKGRLFTWMVNVSRNASIDMLRSKGYHSQKQNR
                     ELTENVYSAAGTISTQTDKIGLRKLVTGLKDDQKVLVELAYFEGYTQDEISKLLNVPL
                     GTVKTRLRSALLQLRDLLKK"
     gene            complement(1205..1585)
                     /gene="gcvH"
                     /locus_tag="VEV83_14825"
     CDS             complement(1205..1585)
                     /gene="gcvH"
                     /locus_tag="VEV83_14825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HYK46449.1"
                     /translation="MTFPADLRYTKDHEWIKLVDGKTAIIGITDFAQRELGDIVFVDI
                     NTVGKSLKAEEIFGTIEAVKTVSDLFSPVAGTILEVNAALNNNPELVNTDPYGEGWMV
                     KVEVSDPAAVGALLDATAYQQLVG"
     gene            complement(1632..2336)
                     /locus_tag="VEV83_14830"
     CDS             complement(1632..2336)
                     /locus_tag="VEV83_14830"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK46450.1"
                     /translation="MRKTATIFLFLLLACTLHAQAPKTVKSTTQQKPVSKEKLVEIKT
                     DFGTMIVKLYDSTPLHRDNFVKLVKQGFYDSLLFHRVIQGFMIQGGDPQSKYADSTAM
                     LGNGEAEGGMIPAEFRPNLYHKKGALAMARTENPEKASSNCQFYIVEGKPYDNTVLNQ
                     VECGVRQFNPDFYYNDATRKMYATLGGTPFLDQNYTVFGEVIKGLPVIDKIAAVAKDQ
                     NDRPLKNIRMKMRMLN"
     gene            complement(2348..2692)
                     /locus_tag="VEV83_14835"
     CDS             complement(2348..2692)
                     /locus_tag="VEV83_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46451.1"
                     /translation="MMAGHDLQQRWWDLEAKLVDRFERKPDIEAILFLIGMQETGFIK
                     QKITKEQKQDLMHVAICTVLSASGFYEFQHKDEEGWPHFRQLKELPAMPLHEQENFLK
                     DHILFYFEQQHF"
     gene            2752..>3246
                     /locus_tag="VEV83_14840"
     CDS             2752..>3246
                     /locus_tag="VEV83_14840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HYK46452.1"
                     /translation="MLQVSVLRQKKEWVKERLSLRNFRQPELVDEIIALDDERKKLQA
                     EFDSIQAKINTSSKEIGKLMGAGKKDEAEQLKTSVTEWKRALDPIKQSTASVERKLQE
                     TIIALPNLPSELVPKGSSPEDNEVVREGGKKPALGQDALPHWELAKKYGLIDFELGTK
                     ITGSG"
BASE COUNT          839 a          747 c          698 g          962 t
ORIGIN      
        1 ctggccattg aattgggata gagatacacc tctttagttt gggtgttcca aaaaaccgtt
       61 gcgaggtttt gctctttacc cggcattcca ggcattttga tgctgatcat ccgcggatct
      121 tccatcagtt tcaaactttg ctcgatgttg ttcagtctcg attcgtacac tttattgtca
      181 gcctgcaagg tgtttcgctc agtgagcaac gcctggtatt tgtcgctcga attcctaaag
      241 tttgaataga agtaaaaatt caatgcagtg ctggtgagaa gtaagataat cgatgctgct
      301 gccaaatatt tccaatatgt atccgtccga cgtttttgat caggcgcgat gaaaggcgtt
      361 acatcttcag cccggttcgg tttttctctt tccgacaaaa taaaatcatc cctcaacgat
      421 gcattcaaga aagtttttac ccgtgctggc gggtccactg tattttcaaa agcgtgcttt
      481 tccagtgcaa cctcgaattg atcgattgct tgtttcaatt caggatgcat gcgcctcaaa
      541 cgttccagct cagcaatctc ctcgtcggtt gccaaaccga gaacataagc ttcaatcgcc
      601 ccgctttgta tgtattccct tatatccatt tactttttta gcagatcgcg caactgcagg
      661 agagcgcttc tcaacctggt ctttacggtg cccaggggta cgtttaataa ttttgagatt
      721 tcgtcctgag tatatccctc gaaataagcc agctcaacca gaaccttctg atcgtccttt
      781 aaacccgtta ccaatttgcg caatccgatc ttatcagttt gtgtgctgat ggtaccagcc
      841 gcactatata cgttctccgt aagttcgcgg ttttgcttct gactgtgata gcctttgctg
      901 cgcaacatgt ctatactcgc atttcggctg acattaacca tccaggtaaa taatcgtcct
      961 ttttctgcat cgtattgttc aatttgccgc catatcttga caaagacctc ctgtaataca
     1021 tcagcagcaa gctccttatc cattaatatc gataagataa cgctatacaa tgctcccgaa
     1081 taattatcat atagatagtt aaaagcagtt tgtgaacgtt cttgtagtaa cgtcaccaat
     1141 tcaggttcgg tatatttgag cgcgccggcc attatagttg gtcttgcaaa atgctaactc
     1201 tatttcagcc cacgagttgt tgataggcag ttgcgtccaa aagggcacca actgccgccg
     1261 ggtcagaaac ctcgacctta accatccagc cttcgccgta cggatcagta ttaacaagtt
     1321 caggattgtt attgagtgct gcgtttactt cgaggatcgt acccgccact ggtgagaaaa
     1381 gatcgcttac tgtttttaca gcttcaattg ttccgaaaat ttcttccgcc ttcaggctct
     1441 taccaactgt gtttatgtca acaaaaacaa tgtcacccaa ttcacgttgt gcaaaatcgg
     1501 ttataccaat aattgcagtt ttgccatcaa ccagtttgat ccattcgtga tcttttgtat
     1561 acctgagatc ggcggggaaa gtcataacaa tgatttttgt tacaaatatt gattaaaaca
     1621 ccggaatatc cttaattaag cattcgcatt ttcattcgaa tattttttag aggccgatcg
     1681 ttctggtctt ttgcaacagc cgctattttg tctatcaccg gcaggccttt gatcacttcg
     1741 ccaaacacag tatagttttg atcgagaaac ggcgtcccgc cgagcgttgc gtacatcttt
     1801 cgtgttgcat cattataata aaaatcaggg ttgaattggc gcactccgca ttccacctgg
     1861 ttaagaacag tattatcgta cggctttcct tccacaatat agaactggca gttactgctt
     1921 gctttttcgg ggttttcggt ccgtgccatc gcgagggcac ctttcttgtg gtaaagattc
     1981 ggcctgaatt cggcagggat cataccgccc tccgcttcgc cgttccccaa catcgcggtg
     2041 ctgtcggcat atttgctttg cggatcacca ccctggatca tgaatccctg gatcacgcga
     2101 tgaaacaaca aactgtcata aaatccttgc ttcaccagct tgacaaaatt gtccctgtgc
     2161 aatggagttg aatcatataa tttcacgatc atcgttccga aatctgtctt tatttcaacc
     2221 aacttttctt tggagacagg tttttgttgc gttgtcgatt taaccgtttt cggagcctgc
     2281 gcgtgaagcg tgcatgcgag tagcaaaaac aaaaagatcg ttgccgtttt tctcataagt
     2341 aagtatatta aaagtgctgt tgttcgaagt aaaataatat atggtctttc agaaaatttt
     2401 cctgttcatg tagcggcatg gccggcaatt cttttaactg cctgaaatga ggccacccct
     2461 cttcgtcttt gtgttggaat tcataaaagc cgcttgcact taacacagtg catatggcca
     2521 cgtgcatgag gtcctgtttc tgttcttttg tgatcttttg tttgataaaa cctgtttcct
     2581 gcatgcctat taagaagagt atcgcttcaa tgtctggctt cctttcgaac cggtcaacaa
     2641 gcttcgcctc aaggtcccac catcgctgtt gtagatcgtg cccggccatc atagcgggca
     2701 aaggtagggg tgttgcatca aaggctatct ttgcccgaaa ttttaaattt tatgttacag
     2761 gtgagtgttc ttcgccaaaa aaaagagtgg gtgaaggaac gactgtcttt gagaaatttc
     2821 cggcagccgg agttggttga cgagataatt gctttggatg atgagagaaa aaaattgcag
     2881 gcagaatttg actccataca ggctaagatc aacacgtcca gcaaagagat cgggaaatta
     2941 atgggcgccg gcaaaaaaga tgaggccgaa caattgaaga cctccgtaac ggaatggaaa
     3001 agagcactgg acccaatcaa acaatcaacg gcttcagtcg aaagaaaatt gcaggaaaca
     3061 ataatcgctt tgcccaacct gccgtcagag cttgtgccga aaggtagctc tcctgaagac
     3121 aatgaggtgg tacgggaagg tgggaaaaaa cctgcattgg gacaggatgc cttgccgcac
     3181 tgggagctcg caaaaaagta cggcttaata gatttcgagc tgggaaccaa gatcactggc
     3241 agtggt
//
LOCUS       DASQJI010000547         3200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_679755,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000547 DASQJI010000000
VERSION     DASQJI010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_679755"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(432..1931)
                     /locus_tag="VEV83_14845"
     CDS             complement(432..1931)
                     /locus_tag="VEV83_14845"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYK46453.1"
                     /translation="MAGIRKQTIQSSLIVYFGFAVGALNMYLYSKHGSFNTDQFGLTR
                     LFFDFAQNIFAFASLGSIPVLYKFYPYYKDNLPDKKNDLLAWVLLASFIGFVIITLAG
                     YVFEPLVVRKFAARSSLFLDYYHLIFPFSLGFLLFSILESYSWALQRTVLTNALKETI
                     LRIITTAFILLFYFKIISFATFMQLFSALYLIITLMLAAYLASIGKLNITFQVSRVTK
                     KFRKKMIGLQFFVFGGICLNAVAVTISGILIASRIGLTATAIFSLAAYVANLIEIPQR
                     SIVSISTGVLSRAWKDKNFPEISRIYHRSSINMLLFSLFIFGNVWLNIAQGINLLHIQ
                     NEYLAGLDVVFVLGIAKIIDAGTGVNSVIIVTSTFWKFEFYTSVILLGLRIPLAYIFI
                     QRFGIIGPAYAELISQIVYNFIRYEFLRRRFSMQPFNTETIYTVILGTAAIALTYFAF
                     HNTAGWLGIIIRSALFSSALIGGMFLLKLTPDAMQLLDVARNRIQDWKK"
     gene            complement(2170..>3200)
                     /locus_tag="VEV83_14850"
     CDS             complement(2170..>3200)
                     /locus_tag="VEV83_14850"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK46454.1"
                     /translation="EKAKQCYLRAIAQKETPVYFENLGLANEKLLLPEEAEAAYKRSI
                     EVDTKTGNSFNRLGVFYYNQMQDDKAIVFYKKALEREPDNVTYLQNLGYAYESSLQYD
                     AAKNVYDRMLAADPVNDNAYYRLAVIAMNDKKYDEAINPITEALKIQPQNIAYLKAAG
                     TAHENLNNYTEALNIYDKALSLHEDDEYFYNRIGIVYYRMNTAETFPKAIDNYKKAIK
                     ANEDANGGSVPNALCAVYWQNLALAYADAGDHESAEKNYLHSLTLDPDTAENYNNVGS
                     FYFNKKQDWRNAKEMYEHAVKLSPNDPLYLRNLAASYQQLGEHKTADELYAKADELEQ
                     QVQPQPQS"
BASE COUNT          918 a          703 c          700 g          879 t
ORIGIN      
        1 acaaattcgt gcatgcttca acaagtggcg gtgtaacaat cacagatctc aacgatgcgt
       61 actggagcaa aaaatatgcg ggagccggga gggtcctcaa ccccagccct tctccgcagg
      121 cggagaaggg agtagttggc aaaagcgact aaaaatcgag ctacactttc tttctacgct
      181 gcaacaattt acaattaatt tatggcttcg aacagttctt ctctccatgc gtcgaaacgg
      241 ccaggatgaa gtggttttcc tctccacctg gaaaggcaat ggttgacgtg caacaatttc
      301 gaattaattg atcacttcga acagttctcc tctccacctg tagagaggcc atggttgacg
      361 tgcaacaatt tagaattaat taatcacttc gaacagttcc ccctccacct gtggagaggg
      421 ccagggtgag gtcacttctt ccaatcctgg atccggtttc gcgccacatc gagcagttgc
      481 atagcatccg gagtaagctt caataaaaac atgccgccaa ttaatgccga agaaaaaagt
      541 gctgaacgaa tgatgatgcc caaccaacca gccgtgttat gaaatgcaaa atatgtgagc
      601 gcgatagcag ccgttccaag aatgacggta taaatagttt ctgtgttgaa aggttgcatg
      661 ctgaacctgc gtcgaagaaa ttcataccga ataaaattgt aaacgatttg cgatatcagt
      721 tcagcatatg ctggcccgat tataccaaag cgctgaataa agatataggc gagcggaatt
      781 cttaaaccaa gtaaaataac acttgtatag aattcgaatt tccaaaatgt agaagtgacg
      841 atgatgaccg aattaacgcc ggtacctgca tcaataattt ttgcgatccc cagaacaaac
      901 acaacatcga gccccgcgag gtattcgttt tgaatatgaa gcaggttaat gccctgtgca
      961 atgttcagcc acacatttcc aaaaataaaa agcgagaaca gcaacatatt aatactcgac
     1021 cggtgataaa tgcgactgat ctccggaaag tttttgtcct tccaggctct tgacaaaaca
     1081 ccggtggaga tcgatacaat gctgcgttgc ggtatttcaa tgaggttggc cacataggcg
     1141 gcaaggctaa atatggctgt cgcagttaga cctatgcggc tcgcgattaa tattccactg
     1201 atcgtaaccg ctaccgcgtt cagacaaatt ccgccaaaaa caaaaaattg cagcccaatc
     1261 atcttttttc tgaatttctt cgtcaccctg ctgacctgga aagtgatatt taatttacca
     1321 atgcttgcca ggtaagcagc gagcattagc gtgatgatca aatacaatgc ggaaaacaac
     1381 tgcatgaacg tggcaaagct tatgatcttg aaataaaaca gcaggatgaa tgcggtggtg
     1441 attatcctga ggatcgtttc tttgagggcg ttcgtcagca ctgttctttg aagagcccac
     1501 gaataacttt cgagaatgga aaacaataag aaaccgaggc taaaaggaaa gatgaggtga
     1561 tagtagtcaa ggaaaagtga tgacctggcg gcgaacttgc gcacgacgag cggttcaaat
     1621 acataaccag caagcgttat aataacgaat ccgataaacg atgcaagcaa aacccaggca
     1681 agcagatcat tctttttgtc cggaagattg tctttgtagt aaggataaaa tttatataaa
     1741 acgggtatcg atccaaggct tgcaaacgca aaaatgtttt gcgcaaagtc gaagaacaaa
     1801 cgcgttaagc cgaactgatc ggtattgaat gaaccgtgct ttgaatagag atacatattc
     1861 agtgcaccga cagcaaatcc aaaatacact ataagactcg attgtatcgt ttgttttctt
     1921 atgcctgcca tgcagtgatt tgaatgactt cgctttgtag ccgaagcgtt ttgccgacgt
     1981 acccggtcat cgcttgaatc gacaaatata ttgatagacg taattgagcg agacgatatt
     2041 tacgcatacc atcatagatc agctgtctac agaaaaaaac ggacggctaa aaacgtcagg
     2101 aggatgagct gaatttgaaa tcgctcgctt tatcattgtc gcaattgtca gaattgctgc
     2161 aaaccagctc tacgactgcg gttggggttg cacttgctgt tctaattcat cagcttttgc
     2221 gtatagttcg tcggcggttt tgtgctcacc taactgctga taactagcgg caagattacg
     2281 caggtataac ggatcattcg ggctgagttt taccgcgtgc tcatacattt ctttcgcatt
     2341 cctccaatct tgtttcttgt tgaagtaaaa gctcccaacg ttattataat tttcggccgt
     2401 atccggatca agggttagcg agtgcaaata atttttttca gccgactcat gatctccggc
     2461 atccgcgtag gccaacgcaa gattttgcca gtatacggca cacaacgcat ttggaactga
     2521 gccgccgttc gcatcttcgt tggctttgat agccttttta taattgtcta tcgctttagg
     2581 gaatgtctct gctgtattca tccggtaata aacgatgcct atcctgttgt aaaaatattc
     2641 atcgtcctcg tgcagcgaca acgctttgtc gtagatgttg agagcctcgg tgtaattatt
     2701 cagattttca tgagcagttc ctgctgcctt caggtaggcg atattttgtg gctggatttt
     2761 taacgcctct gtgataggat taatagcctc gtcatatttt ttatcattca tcgcgatcac
     2821 cgcgagcctg taatacgcgt tatcattcac gggatcagca gcgagcattc gatcgtagac
     2881 atttttcgct gcatcgtatt gaaggctgct ctcatacgca tacccaaggt tttggagata
     2941 cgtaacatta tccggttcgc gttccagtgc ctttttataa aaaacaatag ccttgtcatc
     3001 ctgcatttgg ttataataaa atacacccag cctgttaaat gaattgccgg tcttcgtatc
     3061 gacctcgatc gatcttttat atgcagcttc ggcttcttcc ggcagtaaaa gcttttcatt
     3121 ggcgaggccc aggttttcga aataaaccgg cgtttctttt tgcgcaattg cccgcaaata
     3181 acattgtttt gctttttcaa
//
LOCUS       DASQJI010000548         2967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_835119,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000548 DASQJI010000000
VERSION     DASQJI010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835119"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..960)
                     /locus_tag="VEV83_14855"
     CDS             complement(<1..960)
                     /locus_tag="VEV83_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46455.1"
                     /translation="MRKLLLFHLIFSVLNFSLSAQNISDYFQQIRDNEAELTAFISQM
                     PKGGDLHNHYSGAVYAESYIDWVIEQDFWIDTQTLAVARDAKDSGTWARFSVLSNQGK
                     LDLYKQKLLQLWSTKDYYQTQIAPEQHFFNTFPAFSAASNINYDRGLLELKNRAIAEN
                     VSYIELMLSRVNFPPKKIDSADYYNILLGQIQSRHDSLKLRSVLGSLYDRVMEVPIRD
                     SVNSFIRFVQSLHESLHIDTINFTMRYQTYIARTADPVTTFKNLVASFEAANTDSLIV
                     GVNIVAPEDNPVSMRDYWLHMQMFAFCHRKYKSVKYSMHAGELA"
     gene            complement(1115..1597)
                     /locus_tag="VEV83_14860"
     CDS             complement(1115..1597)
                     /locus_tag="VEV83_14860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46456.1"
                     /translation="MQKLVIVLGFVLITAAATAQKQALGTTYKTAVGIKVYPAAISVK
                     NFQQYNKALEGLLYFWEDGVRFTGLYEIHGDIAGAAGLKWYLGPGAHIGFWSDTWKNK
                     YPEREDGVMIGIDGIIGLDYKIKGAPINVCLDWQPSFNFIGYNYFEGGWGGIGVRYAF
                     "
     gene            complement(1626..2090)
                     /locus_tag="VEV83_14865"
     CDS             complement(1626..2090)
                     /locus_tag="VEV83_14865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46457.1"
                     /translation="MKKIAILLLLIAGLTTAHAQAPYNRALGLKFPGGLSITYKKFVS
                     DTRNFEAQFTSWHEGFRVGGLYEINFYAFQKVPQLSWFVGPGAHIGFWKSAYEKTYDS
                     QVDLGIDGIIGLDYKLKTVPINVSLDWQPSVTLIGSAGFTPVFGGIAVRYTF"
     gene            complement(2196..>2967)
                     /locus_tag="VEV83_14870"
     CDS             complement(2196..>2967)
                     /locus_tag="VEV83_14870"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK46458.1"
                     /translation="ILGRVAARTIGHKKVIYAPHGATFLRKDVSAFTRTAYATIEKAF
                     SIFPAKVVGVSKSEAEAYRRIGIKAEFINNGKYFPFAAEHEKEKDTFTIVTTGRAARQ
                     KNPALFNEIAVKLKHDKHIKFIWIGDGVERSLLTSPNIVVSGWVEKTEVERILSTANL
                     YLSTALWEGLPYAVLEAMSMRLPLLLTDCPGNSDLVENGLNGFLYKDANEAVHHIYEY
                     LRRKDLAQQHGDASFEMLQTAFSIEQMAAGYRKIYSTI"
BASE COUNT          789 a          651 c          671 g          856 t
ORIGIN      
        1 ggccagctcc ccggcgtgca tagaatattt tactgattta tattttcgat gacaaaatgc
       61 aaacatctgc atgtgtagcc agtaatctct cattgaaaca ggattgtcct ccggtgcgac
      121 aatattcaca ccgacaatca ggctgtccgt gtttgctgcc tcaaacgacg ccacaagatt
      181 tttgaacgtc gtcacaggat ctgctgtcct tgcaatatag gtttgataac gcatggtgaa
      241 attgatagtg tcaatgtgaa ggctttcgtg cagcgactgg acaaaacgaa taaagctgtt
      301 tacgctgtcg cggataggta cctccatcac cctatcatac aaacttccga gcactgatct
      361 tagttttaat gaatcgtgtc gtgattgtat ttgaccaagc aggatattat aataatccgc
      421 cgaatctatt ttttttggtg gaaaattgac ccggctaagc atcagttcaa tataagagac
      481 gttttcggca atcgcacggt tcttcagctc cagtaatccc cggtcataat tgatattact
      541 tgccgcggag aaagctggaa atgtgttgaa aaagtgttgc tcaggcgcaa tttgagtttg
      601 gtagtaatcc ttcgttgacc ataattgcaa taatttttgc ttgtagaggt ccagcttgcc
      661 ttgattacta agcaccgaga atcttgccca ggttccagaa tcttttgcat cccgtgctac
      721 tgccaacgtt tgagtatcta tccagaaatc ctgttcgatg acccagtcaa tatagctttc
      781 ggcgtaaact gccccactgt agtgattgtg caggtcgcct ccttttggca tttgtgaaat
      841 gaaagcagta agctccgctt cattatcgcg aatctgctgg aaataatcgc ttatgttttg
      901 ggcgctgagc gaaaagttta ggaccgaaaa gatcaagtgg aataatagta gctttctcat
      961 gtggtccgtt ttcagaagag atgatgcgaa caaatctatc tcatctttct taactgagaa
     1021 ggcggtgagc caaggaggcg ccaacagaat tcaatttttt tgggaattaa gtacggcggc
     1081 tgcaagtaca gaacgggaat aagtttagcg tcggttagaa agcgtatcga acgcctatac
     1141 ctccccagcc gccttcaaaa taattgtagc cgatgaaatt gaatgaaggt tgccagtcca
     1201 ggcatacatt tataggcgca ccttttattt tgtaatcgag cccgataatg ccgtcaattc
     1261 cgatcataac accgtcctca cgttcaggat acttattttt ccaggtgtca ctccaaaaac
     1321 caatatgcgc accgggccca agataccact tcaggccggc agctccggca atatcaccat
     1381 ggatctcata taaacctgta aagcgaactc catcttccca aaagtaaaga agaccttcca
     1441 gcgccttgtt atactgttgg aaatttttta ctgaaattgc cgcaggataa acctttattc
     1501 cgacagcggt tttgtaagtc gtacctagcg cctgcttttg agccgttgca gctgctgtta
     1561 tcagtacaaa cccgagtacg atgactaact tttgcatgat ttatttctta gttatttgtc
     1621 gttaatcaaa aagtgtacct cacggcgatc cctccaaaca ctggagtgaa tcccgccgag
     1681 ccaataagag ttacggaggg ctgccagtcg aggctcacgt tgatgggcac tgttttcaat
     1741 ttatagtcaa ggccgatgat cccatcgatg ccgagatcaa cctgcgaatc ataagttttt
     1801 tcatacgctg atttccaaaa gccgatatga gcgcccggac caacgaacca ggagagttga
     1861 ggaactttct gaaatgcata gaagtttatt tcatagaggc ccccaaccct aaatccttca
     1921 tgccaggaag tgaattgggc ttcgaaattt cgggtatccg aaacgaattt cttataggtg
     1981 atcgaaagac ctccgggaaa ttttaaaccg agtgcgcggt tatagggagc ctgggcgtga
     2041 gcggtggtta aaccggcaat taagagtaaa aggatagcaa tttttttcat tgtgcttttt
     2101 tacgtgaata agcaatgaaa cgattgatga ggagagaatg gtatcaaata gatgttaatt
     2161 tgatttttcg gacaggaagg gttgcgggca gcgattcaga ttgtgctata aatttttcga
     2221 tatcctgctg ccatttgctc aatgctgaat gcagtttgga gcatctcaaa agatgcgtcg
     2281 ccgtgttgct gcgccaggtc tttccggcgc aggtattcgt aaatgtggtg aacggcttca
     2341 ttcgcgtcct tatataaaaa accgttgagt ccgttttcca ccaggtctga attgccaggg
     2401 cagtcggtta atagtaaagg caagcgcata ctcattgcct cgagcaccgc atatggaagg
     2461 ccttcccaga gagcagttga aaggtatagg ttggccgtgc ttaagatgcg ttccacttcc
     2521 gttttttcaa cccagccgct gacaacaatg ttcggagatg taagcaatga tcgttcaaca
     2581 ccatcgccga tccatatgaa ttttatgtgt ttatcatgct tcaatttgac cgcgatctcg
     2641 ttaaataacg cagggttttt ttggcgcgca gcacgtcccg tagttacgat ggtaaatgtg
     2701 tctttttctt tttcgtgttc tgctgcgaat ggaaaatatt ttccattgtt gatgaattcc
     2761 gctttgatac caatgcgtcg ataagcttcg gcttctgact ttgaaacgcc aaccactttt
     2821 gcagggaaaa tgctaaatgc tttttcaata gttgcatatg cagtacgggt gaaggctgat
     2881 acatctttcc ttagaaaagt agctccatgc ggcgcataga tcaccttctt gtgcccgatc
     2941 gttcttgcgg cgactcttcc gagaata
//
LOCUS       DASQJI010000549        18056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_835281,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000549 DASQJI010000000
VERSION     DASQJI010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 18056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18056
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835281"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VEV83_14875"
     CDS             complement(<1..569)
                     /locus_tag="VEV83_14875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK46459.1"
                     /translation="MRFKTVMFIRRHWLNTLFLSRMSEQQLSRKINLVQASAINMIDM
                     VGIGPFVVLSLVAETMNGPYFLYAWIAGALLSFADGTVWSELGATFPLAGGSYNFLKE
                     GFGPRWGRLMSFLFVWQTMIQAPLVIASATIGFAQYLNYIVPLNNVTSKIVSGGLVLI
                     IVFLLYRKIETIGKISVFLWTGVFLIMGW"
     gene            586..1854
                     /locus_tag="VEV83_14880"
     CDS             586..1854
                     /locus_tag="VEV83_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK46460.1"
                     /translation="MNKEKDIPAWINKVNIYEVNTRQYTTEGTFNAFAKHLPRLSEIG
                     VQILWFMPVTPISVERRQGSLGSYYACSDYTSINPEFGTIDDFKKLVDQAHELGMQLI
                     IDWVANHTGYDHHWTREHPDWYEKDEAGNFTEKHGWQDVIDLNYSNKELREEMIRCMK
                     FWLDECNIDGFRCDMAHLVPLDFWVQAREQCETGRSLFWLAECEVPEYHKVFHVTYAW
                     KWMHVSEKLAKGSASLQDMKDVLKSYNDYPAGARKLFFTSNHDENSWNGSEYEKYGDA
                     AKIFAVFTCMWNGVPMVYSGQELPNLKRLKFFEKDEIEWSNAEPGLQKFYKKLLQLNS
                     SHPALCERGNIETIPTDYAENIFAFFRVAGTKKVLVILNLSNRDRLQFRITHPLLEGA
                     YTHLFSEINYKLDNVQSFELQAWEYLVLVC"
     gene            1979..3175
                     /locus_tag="VEV83_14885"
     CDS             1979..3175
                     /locus_tag="VEV83_14885"
                     /inference="COORDINATES: protein motif:HMM:NF040152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pycsar system effector family protein"
                     /protein_id="HYK46461.1"
                     /translation="MNKQDINLIKTAQDFLYTFIESHKDVFVFHDFRFVNETISSCKE
                     IGKAEEVDKEDYEIGVTALILSELSSQPLDNDEIHNETLIAKFIGEHHLPEREVKELQ
                     YYVDFFTNGKLPQNHIEEVLRDGKDLFLAMPDALERLSLLRIELERAANKTYSDLEWL
                     QFCKGYFITHTFFTRSANRKYGTQRSKNYFELERRIDKLHAELAKEKKGHDKASGDVL
                     LDKESEDLFKIAFRNYLNLVELADRKANLLIQVNSILASVIIGFVAKNVESLHSMIIP
                     VAAVLIVAGITIFYGILASKPLNKSSLKDVTYDREPFFFGSFDKLDPGFKHVTIDKYS
                     SDMLELFRGDKKFVFDELIKESFLVRKVLSKKFGYLDIAYKVFFAGLLFIILSFLFVM
                     IFKPFG"
     gene            complement(3215..4318)
                     /locus_tag="VEV83_14890"
     CDS             complement(3215..4318)
                     /locus_tag="VEV83_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK46462.1"
                     /translation="MKKISLLAVFVCGACVLSAQLTVPPNGGNKKAVVGERIGITDVT
                     IHYDRPGVKGRDGKIWGQLIQTGYNDLGFGNTKTAPWRAGANENTTIEFSTDVKIEGQ
                     SLPAGKYAFFIAYDPNECTLIFSKNSSSWGSFFYDEKEDALRVKVKPVATDKSVEWLK
                     YEFTAETDSSATVALQWEKLMIPFNIQVDMKATQLASYRNELRTDKGFMWESWAQAAQ
                     WCVDNNINLEQALLWSDTATSPNFGGDHSFRSWSTKAEVLDKLGRTDEADAAMKKALP
                     YAGVFEMHQYGRQLLAQKRNKEALEVFKMNYDKNPDQFVTLMGLTRGYAANGDTKSAL
                     KYANLALPMAPDPQNKSNVQTLIQKLQDGKDIN"
     gene            complement(4505..4888)
                     /locus_tag="VEV83_14895"
     CDS             complement(4505..4888)
                     /locus_tag="VEV83_14895"
                     /inference="COORDINATES: protein motif:HMM:NF019242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HYK46463.1"
                     /translation="MRLLLSCITALLFISASAQSDSVSQVASFKSTAHSFGKIKQHVP
                     VTTEFKFTNTSDKNVIVETATAECGCTTPEYPKTPIEKGKTGEIKVTYNAESPGKFTK
                     RVTVKFANVKQPIILTIEGEVVTAP"
     gene            complement(4892..5344)
                     /locus_tag="VEV83_14900"
     CDS             complement(4892..5344)
                     /locus_tag="VEV83_14900"
                     /inference="COORDINATES: protein motif:HMM:NF019242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HYK46464.1"
                     /translation="MKKITLLIACVIAITTLRAQAPQVADNDISKVVQFKELDHDFGK
                     IPYGKPAEFTLEMKNVSSDSVTIEDVKVGCGCTTPKWQPGPYPAGQDFNITIGFNGYT
                     EGTFNKVVTIYFKGGLSQLIKFHGETFKTPDNPAPGNAAVDQLKSGGN"
     gene            5590..7194
                     /gene="pckA"
                     /locus_tag="VEV83_14905"
     CDS             5590..7194
                     /gene="pckA"
                     /locus_tag="VEV83_14905"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HYK46465.1"
                     /translation="MSIASVAVSGRGSKKVGFSKTYVNYQLSYEELAEQTLKRREGVL
                     SDSGALCVNTGEFTGRCPKDKFVVRDSLIADRIFWNTFNLPIEDKYFLQLKNKMLRFL
                     DDQEEVWVRDCYACADPTYRLKIRVVNENPWSNLFVSNMFIAPRGHELENFEPDWHVI
                     HAPSFKANPTTDGTRQQNFAIISFGHKTILIGGTGYTGEIKKGIFTILNYLLPQNRNV
                     LSMHCSANIGQDDDVAIFFGLSGTGKTTLSADPDRRLIGDDEHGWTHRGVFNFEGGCY
                     AKCIDLSEDKEPEIFHAIRPGALVENVGFFDGTNRINFSSKKITENTRVSYPLDYISN
                     SVFPAVGGHPKNIFFLTCDAYGVFPPISRLTPGQAMYQFLSGYTAKIAGTEIGITEPK
                     VTFSTCFGAPFLPLHPSVYAEMLGKKMREHNVNVWMLNTGWIGGAYGTGSRIQLKYTR
                     AMVQAALSGSLNRAEYEKHPIFGMMIPCTCPGVPDALLNPRNTWADKNDYDKQARMLA
                     GLFAQNFKEFAQKVSSEILSASPLAE"
     gene            complement(7391..9229)
                     /gene="htpG"
                     /locus_tag="VEV83_14910"
     CDS             complement(7391..9229)
                     /gene="htpG"
                     /locus_tag="VEV83_14910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HYK46466.1"
                     /translation="MQKGQIRVHTENIFPIIKKFLYSDHDIFLRELISNAVDATQKLK
                     TLSSIGDAKGELGDLRIEVVLDEKEKTLSIVDRGIGMTQEEVDKYINQVAFSSAEDFL
                     EKYKDANIIGHFGLGFYSAFMVSDKVEIYSKSYKDEPAVYWSCDGTPEFELYQIEKPD
                     RGTRIVLHINDDSKEFLEATRIRSILEKFCRFLPVPIYFEDKQINNVAPLWTKKPSEL
                     TSQDYQNFYKELYPFGELPLFWIHLNVDYPFNLTGILYFPKIKQSYEIQKDKIQLYSN
                     QVFVTDEVKDIVPEFLMLLHGVIDSPDIPLNVSRSYLQGDPNVKKINAHITKKVADKL
                     EEIFNKERKEFEEKWESLGLFVKYGMMTDDKFLEKANKFFIMEDAATKKFYTIDEYRA
                     ETEALQKNKDGKLVTLYTTDPVQQDSYIKASADKGYKVVKMETMIDAAFINTIEMKWE
                     NTTFKRVDADIVENLIDAQEKNESVLNKDEEAKLKEWFGMQVPEMHVTVEIKGLSPES
                     APVVATRPEFMRRMKDMASLGGGMTAFYAQMPDEVTLTVNGNHPIYQQLLKEENKDKL
                     NKQVRSLADLALLSQGLLKGEELTNFISRSVELMQGKTKSNIILEV"
     gene            9408..9704
                     /locus_tag="VEV83_14915"
     CDS             9408..9704
                     /locus_tag="VEV83_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46467.1"
                     /translation="MHNQFWNYLGAFAITLLLIYETKRYLLGLIAGFVVFCAFYFAYA
                     TDNKNFELSVVAALNVLRKAAQIYLVAYLAAVVLYATTKKISKTSERNVKPAHK"
     gene            complement(9759..10193)
                     /locus_tag="VEV83_14920"
     CDS             complement(9759..10193)
                     /locus_tag="VEV83_14920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46468.1"
                     /translation="MKTKLILGTALSLFVVSGPFLAKQLSPAQPISKNISVEVYKNAS
                     YVSPAYSDTYATLQVTVVRVHGNERDTAWQHTFAPKQLSQYPASDKPMVQKISIPNVN
                     DRKEKLEIYYRLTYNTNGSVLDFLNTTMIGKGQQTGQLNIKI"
     gene            complement(10574..11389)
                     /locus_tag="VEV83_14925"
     CDS             complement(10574..11389)
                     /locus_tag="VEV83_14925"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HYK46469.1"
                     /translation="MSTTSQAVEQTKSVRLQSVSAETPIIQIDKLHVSSKGSPILKNI
                     NTTFQKNKITVLLGPSGCGKTTMLKCLNRLTDLYPDLKLSGSIRIDGEDILDSYRDIT
                     AIRQKMGLLLQRPFPLPMSIYDNIAYGLRIKGVRNKKIINAKVEKHLKEVALWQEVKD
                     RLKTSAQRLSIGQQQRLCLARGLAVEPEIILADEPCSALDPISSRVIEEEFIKLKTDY
                     TIVLVTHILRQAKRLADNVIFMYYGEIVESGPAQQIFEDPQTDILKEYLRVGH"
     gene            complement(11414..12256)
                     /gene="pstA"
                     /locus_tag="VEV83_14930"
     CDS             complement(11414..12256)
                     /gene="pstA"
                     /locus_tag="VEV83_14930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HYK46470.1"
                     /translation="MTLRRKWEEKFFRGLSGLITLIIVLTLIHLIWSIIAKGASSLSW
                     QVVSEAPKGTFYFGGEGGGFLNAITGSFYLAIGATVLAFVVSLPVALFLNIYLIRFPR
                     LLIASRFFLDVLWGIPSIVYGAFGFLILMYLGYRNSLGAGIITVAALIAPIMIRAMDE
                     VLKTIPIGLQEASYALGSTKTETAYKIFFREALPGLATAVLLAFGRGIGDAASVLFTA
                     GFTDLVPHKLSDPAATLPLFIYYQLQSPSENVQNLAYAAAIILTMIVLVVSLSARLLR
                     TRMK"
     gene            complement(12253..13140)
                     /gene="pstC"
                     /locus_tag="VEV83_14935"
     CDS             complement(12253..13140)
                     /gene="pstC"
                     /locus_tag="VEV83_14935"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HYK46471.1"
                     /translation="MILSRRITDLISGKWMALCLSFFFVLPLAIGTGLVLKSQGLAKD
                     SSLLHLIFSSDWAPSEGKFGFWPFIVSSLWVTIVALIISAPLCLLAAIYLSQFAPKWI
                     LKFMHPVIDILAGIPSVVYGVWALLVIVPFVRNTVAPFFDSDSVGYCILSGALVLAVM
                     SVPYILNLLLEVFRQIPIELGEASLALGATKWETIKKVFVRKGGTGILSAYGLGFSKA
                     LGETLAVMMVIGNVVQTPHSMFDAGYPLPALVANNYGEMMSIPSYDSALMFGSLLLLI
                     IILIINFFFRYIIYKSEAL"
     gene            complement(13272..14267)
                     /locus_tag="VEV83_14940"
     CDS             complement(13272..14267)
                     /locus_tag="VEV83_14940"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HYK46472.1"
                     /translation="MKSRFLIITSTLVAFITNFYGVPANAPSHKMSPKVVSISFSGAY
                     SLYPLTQLWAAEYNKTHPDVRFDIQSGGAGKGLTDCISGGVDVAMFSRELTATEKAQV
                     WSLWLCKDAILPTINANNPYAKQIKIRGLKKSEAQAIYSDQSITTWEDLLGISSKTPH
                     KIDVYTRSDASGAADTWASFFGKKQDGLKGIGINGDPGLADAVRKDANGIGFNSYPFI
                     YDIKSGKKFPGIDVIPIDVNGNGTIDAEENFYENVRIFEKAVNDGKYPSPPVRNLYFL
                     LKAGAHAKPELLEFFEWVLTDGQKFLAQAGYVPLPKGDLNASMKKLAAAKTKNNT"
     gene            complement(14346..15731)
                     /locus_tag="VEV83_14945"
     CDS             complement(14346..15731)
                     /locus_tag="VEV83_14945"
                     /inference="COORDINATES: protein motif:HMM:NF024765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alginate export family protein"
                     /protein_id="HYK46473.1"
                     /translation="MKQFTYRKFILIFASFALIASVAKSQSPSPLDTTKKPAADTTKK
                     PAPQNTLTFGLDMRVRTEWRHGYKSIPTPDTTGAYQINQRTRFNVDYKSKGLDVFLSL
                     QDAKVWGQQDPREGQTGTSTTNTPTTTFPIYFFEAYAEPHFNSKLSLRIGRQRISWDN
                     QRLFSENNWRLPGNSFDAVRLIYNNKINFTNELAFSYQQSGENIFTTKYQPLVPNYKS
                     LVADYLNWKLSDKFIVTAINVMDGYQSSNPEKYSTTYQRFTSGGRLEFASYNWYLTLA
                     AYKQYGKDSTGKKIDAHYLQPELRYTGKRLTVRLGMEYFSGQDSSTHPVENKSFSPLY
                     GTAHSFMGNLDIFDVPQDFNFAGMINPYLHFLWQKNKVTVRMENHLFYSQSQFVYKGE
                     KIDKYLGFENDWRFNYKPGKGVVDVEFGFAWAALTESAAVIKKAGDASLTPYWVYSSV
                     RFTPTFGKITF"
     gene            complement(15797..16267)
                     /locus_tag="VEV83_14950"
     CDS             complement(15797..16267)
                     /locus_tag="VEV83_14950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HYK46474.1"
                     /translation="MLSRKTKYAINALVYLARESKNGDPVQISKIAESENIPRKFLEA
                     ILLDLRHAGMLNSRKGKTGGYYLQQSPKEINIADVMRLFDGPIALLPCVAHKYYERCE
                     ECVSEEVCGIRAVFSDVRSETVKMLKKATLAEIIKRSETLKNRKPALKKIAKRV"
     gene            16590..>18056
                     /locus_tag="VEV83_14955"
     CDS             16590..>18056
                     /locus_tag="VEV83_14955"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYK46475.1"
                     /translation="MQRSVLYVLIAFFLSTALHAQDLTHKLPVDSAVRIGKLANGLTY
                     YIRHNEKPENKAEMRLVVNAGAILEEPDQQGLAHFTEHMAFNGSEHFKKNELVNFLQS
                     IGVEFGADLNAYTGFDETVYILPIPLSDTANFRKGLTVLRDWAGGLSFEDEQINGERG
                     VVLEESRLGKGADDRMFRKTFPIQYEGSLYAERLPIGKDSILKSFPYDAVKRFYRTWY
                     RPDLMAVIVVGDIDVKKTEQLVKKYFSGLKNPPEEKERTFADVPGRTKDESIVVTDKE
                     ATNFVLEVDYPFYQIKPEVTVGDYRNWLVKNLFTSMLNQRLSELTRSDNPPFLFASTS
                     FNSYARGYEGFSGFAVAGKNGPDSALSVLIREIERVKQYGFTQAELDRARKRSLAFIE
                     QANNNRNKNESSNFVQDYIDNFLTQEPIPGVATEYNYYNQLLPGITLNEVNALTEPLK
                     QNPHIFVSLTGPSESDYKLPDNATLLQNTYAAQKTAVAP"
BASE COUNT         4968 a         3943 c         3978 g         5167 t
ORIGIN      
        1 atccatccca tgatcaggaa aacaccagtc cataaaaaca cacttatctt accgatcgtt
       61 tcgatctttc tgtacagtag gaagacaatt atcaacacta agccaccgct aacgatcttg
      121 cttgtcacgt tattcagcgg aacgatgtaa ttgaggtatt gcgcaaagcc gatcgttgct
      181 gatgcaatca cgagtggcgc ctggatcatg gtctgccaca caaataagaa gctcatcaat
      241 cgcccccaac gcggaccgaa gccttctttc aaaaaattgt aactgcctcc cgccaacgga
      301 aatgttgctc ctaattcgct ccacaccgta ccgtcagcaa aagataagag ggcaccggcg
      361 atccatgcat aaaggaagta gggaccattc attgtttctg caaccaggct cagcacaaca
      421 aagggcccta tgccgaccat gtcgatcata ttgatggcgc ttgcctggac caaatttatt
      481 ttgcgggaaa gttgttgttc gctcatccgc gataaaaata aggtattcaa ccaatgccgg
      541 cgaatgaaca taacagtttt aaaacgcatc ccttaatttg cgcaaatgaa caaggagaaa
      601 gacataccag cctggatcaa caaggtgaat atttatgagg tcaacacaag gcagtataca
      661 acggaaggta cattcaatgc gtttgcaaaa catttgccac ggttaagcga gatcggagta
      721 caaattttgt ggtttatgcc ggtaacacct atcagcgttg aaagaaggca aggttcgctc
      781 ggcagttatt acgcatgcag cgattacacg tcgatcaatc ccgagtttgg aacgatcgac
      841 gattttaaaa aactagttga ccaggcgcat gaattgggaa tgcaactgat cattgactgg
      901 gtagcaaatc atactgggta tgatcaccat tggacgagag agcatccgga ttggtatgaa
      961 aaagatgagg ccggaaattt tacggaaaag cacggttggc aggatgtgat cgatctcaac
     1021 tatagcaaca aagaactgcg ggaagagatg atacgttgca tgaagttttg gttagacgaa
     1081 tgcaacatcg atggttttcg ctgcgatatg gcgcacctcg tgccgcttga cttttgggtg
     1141 caggcaagag aacaatgcga gactggcagg tcactttttt ggctggctga atgcgaggtg
     1201 cccgaatatc acaaagtatt ccatgtgaca tatgcctgga aatggatgca tgtgagcgaa
     1261 aagcttgcga aaggatcagc gtcattacag gatatgaaag acgtattgaa atcatataac
     1321 gactatccgg ccggcgcccg caagcttttt ttcacatcga atcacgacga gaatagttgg
     1381 aacggcagtg agtacgagaa atatggagat gctgcaaaaa tatttgctgt gtttacctgt
     1441 atgtggaatg gtgttccgat ggtttacagc gggcaggagt tacccaatct taagcgcttg
     1501 aagttttttg aaaaagacga gatagaatgg tcgaacgcag agcctgggct tcagaagttt
     1561 tataaaaagc ttttacagct caattcttcg caccctgcgt tgtgtgagcg tggtaatatc
     1621 gagacgatcc ccaccgacta tgcggaaaat atattcgcat tttttcgtgt agcgggaaca
     1681 aaaaaggtgc tcgttatctt aaaccttagt aatcgcgaca ggcttcagtt ccggatcact
     1741 catccgttac ttgaaggcgc atacacacat cttttttcag agatcaatta taaattagat
     1801 aatgttcaat cgtttgaact gcaagcatgg gaatacctgg tgcttgtttg ttgaatctga
     1861 ataaggaatc aagaaatgac gatagcatta aaagataaac acactgattc gggtgagcac
     1921 tttgcttcca ggagattatt ttttaccttc caatgagaac gcgaacaact catagcttat
     1981 gaacaagcag gacataaatt tgattaagac agctcaggat tttttataca catttatcga
     2041 atcgcacaag gatgtttttg tctttcacga tttcaggttc gtgaacgaga ccattagttc
     2101 atgtaaagaa attggcaaag ctgaggaagt cgacaaagaa gattacgaga ttggagtaac
     2161 ggcgttaata ttatccgagc taagttcaca gcctctcgac aacgacgaga tacacaatga
     2221 aacgcttatc gcgaagttta ttggtgaaca tcatttgccc gagcgggaag ttaaggaact
     2281 tcaatactac gttgatttct tcacgaacgg caagcttccg caaaaccata ttgaagaagt
     2341 tttgagagat ggcaaggact tgtttctcgc aatgcccgat gcactcgaac ggttaagcct
     2401 gcttcgtata gagcttgaaa gggccgcgaa taaaacatac agcgacctcg agtggttgca
     2461 attctgcaag gggtatttta tcacccatac atttttcaca cgcagtgcga atcgaaagta
     2521 tggcacgcaa cgcagtaaaa actactttga gctcgaaagg cgcatcgata agttgcatgc
     2581 ggagctggca aaagaaaaga aaggccatga caaggcatcg ggtgatgttt tgctcgataa
     2641 agaaagcgaa gaccttttca agatcgcttt cagaaattat ctcaaccttg ttgaactggc
     2701 agatagaaaa gccaatctcc ttatccaggt aaactcgatc cttgcgtcgg tgataattgg
     2761 tttcgttgcc aaaaatgtag agagcctcca ctccatgatc attccagtgg cagcggtgtt
     2821 gatcgttgcc ggcattacca tattttacgg cattctcgcc agtaaaccat tgaacaaatc
     2881 ttcattgaaa gatgtgacgt atgaccggga gcctttcttc tttggaagtt tcgataaact
     2941 ggaccctggt tttaaacatg taacgatcga taaatattct agcgatatgc tcgagctttt
     3001 ccggggcgat aaaaaatttg ttttcgacga gctcataaaa gaatcattcc tcgtgagaaa
     3061 agtactgtcc aaaaaattcg gctacctcga catcgcgtat aaggtgtttt ttgcaggact
     3121 gctttttatt atcctcagtt ttctttttgt gatgatcttt aaaccgtttg gataaagatg
     3181 gctggcggta cctccagcca ccggccctgg aaaattaatt gatgtccttt ccgtcctgta
     3241 gtttctgaat taaagtttga acgttgctct tattctgcgg gtcaggcgcc atcggcaagg
     3301 cgaggtttgc gtattttagc gcactctttg tgtcgccgtt tgctgcataa ccgcgtgtca
     3361 atcccatgag tgttacaaac tgatccggat ttttatcata attcatcttg aatacttcca
     3421 gcgcttcttt attccttttc tgcgcaagca attgcctgcc atactgatgc atttcaaaaa
     3481 cgcccgcata tggaagtgct ttcttcattg ctgcatccgc ttcgtcagtt cttccaagtt
     3541 tgtcaagcac ctccgctttt gtactccatg atctgaagct gtgatcgcca ccaaaatttg
     3601 ggcttgttgc ggtatcgctc caaagaagcg cctgctcaag attgatgttg ttgtctacac
     3661 accattgtgc agcctgcgcc caactttccc acataaaccc tttatcggta cgcaattcat
     3721 tcctgtatga agcaagctgt gttgctttca tatctacctg tatattgaaa gggatcatca
     3781 gcttctccca ttgcagtgca actgtcgcag aactgtcagt ctcagcagtg aattcgtatt
     3841 tcaaccactc gacactttta tctgttgcaa ccggttttac cttaacacgc aaggcatcct
     3901 ctttctcatc atagaaaaaa cttccccagc tacttgaatt tttggagaag atgagcgtgc
     3961 attcattcgg gtcataggca atgaaaaagg catacttacc cgcaggcaaa gattggcctt
     4021 cgatctttac atccgttgag aactcgatag tagtgttctc attcgcacct gcacgccagg
     4081 gagctgtttt ggtatttcca aaaccaagat cattataccc ggtttgtata agttggcccc
     4141 aaatcttacc gtcgcggcct tttacaccgg gacgatcgta atgaatcgtt acatcggtta
     4201 tcccgatgcg ttcacctacc acagcctttt tatttccgcc attaggcggc actgtaagtt
     4261 gcgcggaaag aacgcaggca ccgcaaacga aaaccgcgag tagagatatt ttcttcatgt
     4321 gggataaatt tgtttcaact gaaactacag gtttgccaca aacggccgaa acaataattt
     4381 gattaacgcc aaatcgggat gacaaccgga ggaattcagt atatctcgat cggcaaagag
     4441 acctattttg cataaaaaaa ccgcctcgtt atcttaggcg gtctcttatc tttcattaat
     4501 tattttaagg tgcggttact acttcaccct caatggtaag aatgatcggt tgctttacat
     4561 tcgcaaattt tactgtaact ctttttgtaa attttccggg actttccgca ttataggtga
     4621 cttttatttc accagttttc cccttttcga tgggtgtctt tggatattcc ggcgttgtac
     4681 aaccgcattc agccgttgcg gtttccacga tcacgttctt atcactcgta ttcgtgaact
     4741 tgaactcagt agttacggga acgtgttgtt ttattttgcc aaaagagtgc gcagtcgatt
     4801 tgaaacttgc aacctgcgaa acactgtctg attgggcgct cgcagaaatg aacagcaggg
     4861 cggtgatgca gcttaacaat aatcgcataa attagtttcc tccggatttt aattggtcaa
     4921 cagcagcatt accaggggcc gggttatcgg gtgttttgaa cgtttcgccg tggaatttta
     4981 tcagttggct caaaccgcct ttgaagtaaa tagttaccac tttattgaaa gtaccttccg
     5041 tgtacccgtt aaagccaatg gttatgttga agtcctggcc agcaggataa ggacccggct
     5101 gccatttagg ggtagtgcag ccacatccaa cctttacgtc ttcgatcgtt acagaatcgg
     5161 aagagacatt tttcatttcc agtgtgaatt cagcaggttt accatacggg atctttccaa
     5221 agtcatggtc aagttcttta aattgaacaa ccttggagat atcattgtca gcaacttgag
     5281 gagcctgggc acggagtgtt gtaattgcaa ttacacaagc aattaataac gtaatctttt
     5341 tcatttgagt ttttttaata gcgccataaa attagagatt attttgactg atgctgaatt
     5401 taaagtttaa gagttcctta attcaattca ttttttaaag acggccacgc gaaatagttg
     5461 caatcgattg tgcataaacg tcaatcccca tccgccgccc gctatggtat acatttttat
     5521 taaaaaaact aacgctagta agtttttgtt tgatactttt gcccatccat taaatcaatt
     5581 gcttgcatta tgtcaatagc atctgtggcg gtttctggca gggggtcaaa aaaggtcgga
     5641 ttcagcaaaa cctatgtcaa ttaccagctt tcttatgaag aactagcaga acaaacgcta
     5701 aaaaggagag aaggagttct gagtgatagc ggcgcattat gtgtaaatac cggagaattc
     5761 acgggccggt gtccgaaaga caagttcgtg gtgcgagata gcttgatagc cgatcgtatc
     5821 ttttggaaca cattcaatct gcctattgaa gacaaatact ttttgcagtt aaaaaacaaa
     5881 atgctgcgct ttcttgatga ccaggaagaa gtatgggtgc gtgattgcta tgcctgtgct
     5941 gatcccacat accggctcaa aattcgggta gtgaatgaaa atccgtggag taaccttttt
     6001 gtttccaaca tgttcatagc gccacgcggg cacgaattgg aaaattttga accggactgg
     6061 catgttatac atgcgccttc ttttaaagca aatccaacaa ccgacggcac ccgtcagcag
     6121 aattttgcga tcatctcctt tggccacaaa actattttga tcggcggcac cggctatacg
     6181 ggcgaaataa aaaaaggaat tttcacgatc ttaaattacc tgcttccaca aaacaggaat
     6241 gttctcagca tgcactgcag tgcgaacatt gggcaggatg acgacgtagc tattttcttc
     6301 gggctgagtg gaaccggaaa aacaactttg agcgccgacc cggacagaag gttgatagga
     6361 gacgacgaac acggttggac acacagaggc gtgtttaatt tcgaaggagg gtgctacgcg
     6421 aagtgtattg atttgagcga agataaagaa cccgagatct ttcatgccat ccgaccggga
     6481 gcgctggttg agaacgttgg cttctttgac ggtacgaacc ggataaattt ctccagcaaa
     6541 aaaatcaccg aaaacacaag ggtcagttat cccctcgatt atatttctaa ttcagtgttt
     6601 cctgcggttg gtggtcatcc caaaaatatt ttctttttga cgtgtgatgc gtatggtgtt
     6661 tttccgccga taagtcgtct tacgcctggc caggcgatgt accaatttct cagcggttac
     6721 acagcaaaaa ttgcggggac cgagatcggg atcaccgaac ctaaagtaac attcagcacc
     6781 tgtttcggtg cgccgttttt gcctttgcat ccttcggtat acgctgaaat gcttggaaag
     6841 aaaatgaggg aacataacgt aaatgtctgg atgctgaata ccggttggat cggaggcgcc
     6901 tacggaaccg gcagccgtat tcaattaaaa tatacacgtg ccatggtgca ggcagcatta
     6961 agtggctcgt tgaacagggc tgagtatgaa aaacacccaa tttttggaat gatgatcccg
     7021 tgcacatgtc cgggcgttcc ggacgcgttg ttgaatccgc gcaacacgtg ggctgacaag
     7081 aatgattatg ataagcaagc gcggatgctc gcgggtttgt ttgcgcagaa ttttaaagag
     7141 tttgctcaga aagtatcgtc ggaaatttta tccgcatcac ctttggctga ataaaaaagt
     7201 tctatattta acggcttttt tcaagcttca aggtctctac gattgcaaac tccataagag
     7261 aactccaccg ggcttcggtg gagttctgtg ttttgaaatc atatgtgttg accacgaact
     7321 atgacctgat gataaagcca aattgttcgg gcaactactc aacagcaatc tcttcacaaa
     7381 tgagctgacc ctacacttcc aaaataatat tgctctttgt ctttccctgc atcaattcaa
     7441 cactgcggct gataaagttc gtcagctctt cgccttttag taaaccttga gaaagcaacg
     7501 caagatctgc caggctccgg acctgcttgt tcagcttgtc tttattttct tctttaagaa
     7561 gttgctgata tatcggatgg ttaccgttga cggtaagagt aacctcatcg ggcatttgtg
     7621 cataaaaggc tgtcatgcct ccgccaagac ttgccatgtc tttcatgcga cgcataaatt
     7681 cagggcgtgt tgcaacaaca ggcgcacttt cggggctcaa gcctttgatc tcaactgtca
     7741 catgcatttc tggcacttgc atgccaaacc actcttttag ttttgcttct tcgtctttat
     7801 taagaacact ttcattcttt tcttgtgcat cgataaggtt ttcgacgatg tcggcatcca
     7861 ctctcttgaa cgtggtgttc tcccatttca tctcgattgt attgatgaat gccgcatcga
     7921 tcattgtttc catttttaca actttgtatc ccttatctgc ggatgccttt atgtaactat
     7981 cctgttgcac gggatcagta gtgtacagcg taacgagttt accgtcttta tttttttgca
     8041 gcgcttctgt ttccgctctg tattcatcaa tcgtgtaaaa ttttttcgtt gctgcatctt
     8101 ccatgatgaa gaatttgttg gccttctcca ggaacttatc gtcggtcatc attccatact
     8161 tcacgaagag cccgaggctt tcccactttt cttcaaattc ttttctctcc ttattaaata
     8221 tctcttcgag cttatccgca actttcttcg tgatatgtgc attgattttt ttaacgtttg
     8281 gatcgccctg caaataacta cggcttacat tcagtggaat gtccgggcta tcaataacgc
     8341 cgtgaagcaa catcaaaaat tccgggacga tatcctttac ttcatccgtt acaaacacct
     8401 ggttgctgta taattggatc ttgtcttttt ggatctcgta gctctgcttg atcttcggaa
     8461 aatataaaat cccggttaag ttgaacgggt agtcaacatt caaatggatc cagaataggg
     8521 gcaactcgcc aaagggatat agttctttat aaaagttctg gtaatcctgt gaggtgagct
     8581 cggaaggttt ctttgtccag agtggcgcta cattatttat ttgtttgtct tcaaagtaga
     8641 ttggtaccgg taaaaagcga cagaattttt caaggatgga cctgatcctg gtcgcctcta
     8701 agaattcttt gctgtcgtcg ttgatgtgta aaacgatccg tgtgccccgg tccggctttt
     8761 caatttgata taactcgaat tccggcgttc catcgcagct ccaatacacg gcaggttcgt
     8821 ctttgtaact ttttgaatat atctcaactt tgtcgctcac cataaaggcg ctgtaaaaac
     8881 ccaaaccaaa atgccctatg atgttcgcgt ctttatattt ttcgaggaag tcttctgcac
     8941 tgctgaatgc aacctggttt atgtatttgt ccacttcttc ctgcgtcatg ccaataccgc
     9001 gatcgacgat gctcaacgtt ttttcttttt cgtccaagac cacctcgatc cgcagatctc
     9061 caagttcacc tttggcatcg ccgatcgacg aaagtgtttt taatttttgg gtggcatcta
     9121 cagcgttgct gatgagctca cgtaaaaaaa tatcgtggtc gctgtaaaga aatttcttaa
     9181 tgatcgggaa aatgttttcc gtatgtactc ttatctgtcc tttttgcata ttagttgctt
     9241 tcgtctcccg caaactggga gaattttaaa tgattaaatg gaagatcttt taatttttaa
     9301 gtgctcaagg tgcaaaacaa agaaaatacc aactaaatag aaatgacagg atgtcaaaat
     9361 ttttgatttt tttcttaact tgtttcacca aactcaaaac tgctgccgtg cataatcaat
     9421 tttggaacta cctgggggct tttgccatca cgttacttct tatttacgag acaaaaaggt
     9481 acctgctggg gctaatcgcc gggtttgtcg tgttctgcgc gttttatttc gcttacgcga
     9541 ccgataacaa aaacttcgaa ttaagtgtgg ttgctgcatt gaacgtcctg cgcaaggcgg
     9601 cacagatata cctggttgct tacctggcgg ccgtggttct ctacgcgaca acaaagaaga
     9661 taagcaaaac aagtgagcgg aatgtgaaac ccgctcacaa ataaaaaggt ggtattgcat
     9721 accaccctga acctactgct gaatataact acaaaaagtt agatcttaat attgagttga
     9781 ccggtttgtt gtcctttgcc tatcatggtc gtgttcagaa aatcaagcac gcttccgttt
     9841 gtgttgtagg taagcctgta atagatctcc agtttttctt tccggtcatt cacattcggg
     9901 atagagattt tctggaccat cggtttatca gatgccggat attgactaag ctgcttaggt
     9961 gcgaaggtgt gttgccaggc cgtgtctctt tcattaccgt gaacacgaac gactgtaacc
    10021 tgcagggttg catacgtatc agaatatgcc ggggaaacat agctggcgtt tttatatacc
    10081 tccacactaa tgtttttgct tatcggctgt gcaggcgaaa gctgctttgc gagaaacggt
    10141 cccgaaacaa cgaagaggct aagtgcagtt ccgaggatta atttcgtttt catataatta
    10201 gtttttttga gtatcatcct atgccaatac atttttcaaa accgatacca cccgaccttt
    10261 ctaaggacga gcggttttac ggaatcgata aatggctaaa aatgccggta gtgtcttttg
    10321 ccgttgacga ccactgtacc atttcattac aaaatcgttc ggaagcgtac agttaatatg
    10381 ttaacgaaga gtaaaacgcc aagataatgt ttgaagtttg atgtttgatg ttctgacaaa
    10441 ctcattactc gttactcatc attcataaaa aaagccactc cttgaaaaga gcggcttcgt
    10501 ttattcaaac gtttaccacc aacaaagttg ttgccgttgg cacggcggag gcattaagtc
    10561 acggttagaa cggctaatgg ccgacgcgga gatattcttt taaaatatcg gtttgaggat
    10621 cttcgaatat ttgctgcgca ggcccgcttt caacaatttc gccatagtac ataaatatca
    10681 cgttgtctgc aagacgcttt gcctggcgaa gaatatgcgt caccaaaacg atcgtatagt
    10741 cagtttttag ttttatgaac tcctcttcga taaccctcga agaaatggga tcaagagcag
    10801 aacaaggttc atctgctaaa ataatttcag gttccaccgc aaggcctctt gccaaacata
    10861 accgttgttg ttgcccgatt gacaatcgct gtgcagaagt tttgagacgg tctttgactt
    10921 cctgccatag tgcaacttct ttcaaatgct tttcaacttt tgcatttatg atctttttat
    10981 tgcgaacacc ttttatgcgc aggccgtagg cgatgttatc ataaatgctc atgggtaacg
    11041 gaaacggacg ttgtaataac aatcccattt tttgacgaat tgcggttatg tcccgatatg
    11101 agtccaggat atcctcaccg tcgatgcgaa tgctgccgct taatttgagg tcgggataca
    11161 aatcggttaa ccggttcaaa catttgagca tcgttgtttt accacaccct gacgggccaa
    11221 gcaacactgt tattttattt ttttgaaaag tagtgttgat gtttttcagg ataggggagc
    11281 ctttgctgct cacatgcaat ttgtcgatct ggatgatcgg tgtttctgca gaaacggatt
    11341 gcagtctcac gctttttgtc tgctccacgg cctgtgatgt tgttgacata acgtttgaat
    11401 ttttgttgaa tgattatttc atgcgggttc ttaacagccg cgcactgagg ctaacgacca
    11461 gaacgatcat agttaaaatt attgccgctg cataggcaag gttttgaaca ttctcgcttg
    11521 gagattgtaa ctggtaatag ataaacaaag gaagcgtagc tgccgggtcg cttaatttgt
    11581 gcggaacaag gtctgtgaat cctgcagtaa acaatacgga agctgcgtcg ccgatcccgc
    11641 ggccaaacgc aagcagcacg gcagtggcaa gacctggtaa tgcttccctg aaaaatattt
    11701 tatatgctgt ttctgttttc gttgatccca acgcatacga tgcttcctgc aaaccgattg
    11761 gaattgtttt gagcacttcg tccatcgcgc gtatcatgat aggagcgatg agtgctgcca
    11821 ccgtgatgat gccggcgccg agcgaattcc tgtaaccgag gtacatcagt attaaaaatc
    11881 caaacgctcc gtaaacgata gacggaatac cccagagtac gtcgaggaaa aaacgtgaag
    11941 cgatcagtag tcgtggaaac cgtatcaaat atatattgag aaataaagca acggggagac
    12001 taacaacaaa tgcaagtacg gtagcgccga tcgcgagata gaatgatccc gttatcgcgt
    12061 tcaaaaaacc accgccttca ccgccgaaat aaaacgttcc tttcggcgct tcagagacca
    12121 cttgccacga aagcgatgac gcaccttttg ctatgatgct ccaaatgagg tgtattaatg
    12181 tcagcactat tatcagcgtt atcagtccgg ataagccgcg aaaaaatttc tcttcccatt
    12241 ttcttcttag tgtcataggg cttcggattt atagatgatg taacggaaaa aaaagttgat
    12301 gataagtatg ataatgagca gcaacaatga cccgaacatc agcgcagaat cgtacgacgg
    12361 aatgctcatc atctcgccgt aattgtttgc aacgagtgcc ggcagcgggt atcctgcatc
    12421 aaacatcgaa tgcggtgttt gcacaacatt acctatcacc atcatcacgg cgagtgtttc
    12481 accaagtgct tttgaaaacc ccaggccgta tgctgataaa atgccggtgc cgcctttacg
    12541 cacaaaaact tttttgatcg tctcccattt cgttgcgccc aaagcaagcg atgcttctcc
    12601 aagttctatc ggtatttgcc gaaatacttc gagcaataaa ttcaggatgt atggaacgct
    12661 catcaccgcc agcacaagtg cgccggaaag aatacaatag ccaacggagt cggagtcaaa
    12721 aaaaggagcg actgtgttac gcacaaacgg cactatgacc aacaacgccc aaacgccata
    12781 cacaactgaa ggaatgcctg caagtatatc tattaccggg tgcatgaatt taaggatcca
    12841 cttcggcgca aattgtgaaa ggtaaattgc agcaagcagg caaagtggtg ccgaaatgat
    12901 aagggctacg atcgtcaccc agagagagct gacaataaat ggccaaaacc caaacttgcc
    12961 ttctgatggc gcccaatcag atgaaaaaat caaatgcaac aggctgctgt cttttgcaag
    13021 tccctgcgac ttcaacacga gcccggtacc aatcgcgagc ggtaagacaa aaaagaaact
    13081 caggcataat gccatccact tgcccgaaat aagatcggtt attctcctgg acaatatcat
    13141 tggcggtaaa tttttgcttg gtaaatgatt gaagaagcat acttagtaaa agctttcatt
    13201 ccgcttgcgc gaaaatgaaa gcctggctta acatgagttt actaagtatc gcatataacc
    13261 cccgtaaatg atcaagtgtt gttttttgtt tttgcagcgg ccagcttttt catggacgca
    13321 ttcaaatcgc ctttcggcaa aggcacataa cctgcctgcg ctaagaattt ttgaccatcc
    13381 gtaaggaccc attcgaagaa ttcaagtaat tcaggttttg catgcgcgcc ggctttcaaa
    13441 agaaaataga gattccgtac aggtggtgaa gggtatttgc cgtcatttac cgctttctca
    13501 aaaatcctga cgttctcgta aaaattttct tccgcgtcaa ttgttccgtt gccattcacg
    13561 tcgatcggaa taacatcgat gcccggaaat ttttttccgc ttttgatgtc ataaataaat
    13621 ggataactat taaacccaat tccatttgcg tctttcctca ccgcatccgc taaaccagga
    13681 tcgccgttta ttccaatacc ttttaacccg tcttgtttct tgccaaagaa agaagcccat
    13741 gtatcggctg caccagatgc atcagacctc gtgtacacgt cgatcttgtg aggtgttttg
    13801 ctgcttatgc caagcaggtc ttcccaggtt gttatgcttt ggtctgaata aatcgcctgc
    13861 gcttctgatt tttttagtcc tcttattttg atctgcttcg cataaggatt gtttgcattg
    13921 atggttggga gaattgcgtc tttgcaaagc cacaacgacc acacctgcgc cttttccgtc
    13981 gcagttaatt cacgtgagaa catggccaca tcaacaccgc cggagatgca gtctgtgaga
    14041 cccttgcctg cgccacctga ttgaatatcg aagcgtacat caggatgggt cttgttgtac
    14101 tctgctgccc acagttgcgt gaggggatag agtgaatacg cgccggaaaa agaaatcgat
    14161 accacttttg gtgacatctt atgcgaggga gcattggcgg gaacgccata aaagttggta
    14221 ataaatgcta caagggtact ggtgatgatt aaaaatctac ttttcatagc ctagtatttt
    14281 gattaagtct ataaatttaa taggaattaa aattattgtc ttttattaaa ctgccaaatt
    14341 attttttaga atgtgatctt tccaaacgtt ggtgtgaagc gtacgctgga gtaaacccag
    14401 taaggcgtta aactggcgtc tcctgccttt ttaataacgg ctgcggactc ggtaagcgct
    14461 gcccaggcaa agccaaattc aacatctacg acacccttgc cgggcttgta gttaaatctc
    14521 cagtcatttt caaagccaag atacttgtct attttttctc ctttatatac aaattgagat
    14581 tgagaataga agaggtgatt ttccattcgt acggtaactt tatttttctg ccataagaaa
    14641 tgcaggtacg gatttatcat tcccgcaaaa ttgaaatcct gcggcacatc aaatatgtcg
    14701 agattaccca tgaagctgtg tgcggtccca tacaatggag agaagctttt gttttcaacc
    14761 gggtgggtgg agctgtcctg gccgctgaaa tattccatgc cgaggcgaac ggtaagcctt
    14821 ttacccgtat acctgagctc aggctgcagg taatgagcat ctattttttt tccggttgaa
    14881 tctttcccat actgtttgta tgcggccaaa gtaagatacc agttataaga agcgaattcc
    14941 aaacgtccgc cgcttgtaaa tctttgatac gtcgttgaat atttctccgg attcgaactt
    15001 tgataaccat ccattacgtt aatcgcagtc actataaatt tgtcggatag cttccagtta
    15061 agatagtcgg ccaccaacga tttatagtta ggcaccaacg gctggtactt ggtagtgaaa
    15121 atattttctc ctgactgctg atagctgaac gccagctcgt tcgtaaaatt gattttgttg
    15181 ttataaataa gtcttaccgc atcgaacgaa ttgccgggaa gcctccagtt attttcggag
    15241 aataaccttt ggttatccca cgagatcctt tgccggccaa ttctcaacga aagcttgctg
    15301 ttgaagtgtg gttcggcata tgcctcaaaa aagtaaattg gaaaagtagt ggtgggcgta
    15361 ttggtagtgc tcgtgccggt ttggccttcc cttggatctt gctgacccca aacttttgcg
    15421 tcctgcaacg aaagaaatac atccaggcct ttgcttttgt aatcaacatt gaaccgcgtc
    15481 cgctggttta tttggtatgc accggtggtg tcgggcgtag gtattgattt ataaccatgc
    15541 ctccattcag tgcgaactct catatcgaga ccaaacgtca gcgtgttttg aggagccggc
    15601 ttcttagttg tatcagcggc gggtttctta gtagtatcaa gcggtgacgg actttgcgat
    15661 ttcgcgacgc ttgcaatcag tgcgaacgaa gcaaaaatca agataaattt tcgataggta
    15721 aattgtttca taacaggtga tttgcgagca aatatataaa tcctatcgaa ttagtaggat
    15781 tttcgcaaaa atttttttag acgcgctttg cgatcttttt taaagctggt ttgcggttct
    15841 tcagcgtttc acttcgcttg atgatctctg caagtgtagc cttcttcaac atctttactg
    15901 tttcagaccg cacgtcagaa aagacggcgc gtatgccgca tacctcttcg ctcacgcact
    15961 cttcgcagcg ttcataatat ttgtgggcaa cacaaggcaa caacgcgata ggcccgtcga
    16021 ataagcgcat cacatccgcg atgtttattt cttttggcga ttgctgaaga tagtagccgc
    16081 ctgtttttcc tttgcggctg ttgagcatgc cggcatgacg aaggtctaag aggatcgcct
    16141 cgaggaattt ccgtgggatg ttttcacttt ctgcgatctt gctgatctgt accggatccc
    16201 catttttgct ttcacgggca aggtaaacaa gcgcattgat tgcgtatttc gtttttcttg
    16261 agagcatatg tattcaggtg gtaaaaatat tgcatggaga ttgtccattc aatatcgtca
    16321 gcaatttaaa gaaaaatttc cgataggttt ttttgatgtt gcactacccg caagttaaag
    16381 aacgaacact atcccaaaag aaaatacgtg gcctctttaa accgaatgtc ccgatgccat
    16441 gaaaaacgga acgatgaact gagcgtagca acaggcgatg ccaccaatga taaagcgggc
    16501 gaccaaacgt gttttcttaa gatttgatta tgataaacgg ctgaccggat aagtatttcg
    16561 cgaatatatt tgtagctaaa cttttttaca tgcaacgttc agttctttat gtgctcatag
    16621 cgtttttttt gagcacagcc cttcatgccc aggacctcac gcataaatta cccgtcgact
    16681 ctgccgtgcg gataggcaaa ttggcaaatg gccttacata ttatattcgt cataatgaaa
    16741 aaccggaaaa taaggccgag atgcgccttg ttgtgaatgc cggtgccatt cttgaagagc
    16801 cggatcaaca agggcttgcg cacttcaccg aacacatggc gtttaatggg agtgaacatt
    16861 ttaaaaaaaa tgagctcgtc aattttcttc agagcatagg cgtggaattt ggcgccgatt
    16921 tgaatgcgta taccggcttt gatgaaaccg tatacatatt accgatccca ttatcagata
    16981 cggctaactt cagaaaagga ctaaccgtat tgcgcgattg ggccggcggc ctttcatttg
    17041 aagacgaaca gatcaacggt gaacgcggag tagtactcga agaaagccgg cttggtaaag
    17101 gcgctgatga caggatgttt cgaaaaacat ttccaatcca atatgaaggc tcattgtatg
    17161 cagaacgatt accgatcggt aaagacagta tcttaaaaag ctttccctac gatgcggtga
    17221 aacgttttta ccggacctgg tatcggcccg acctgatggc tgtaatcgtt gtcggagaca
    17281 ttgatgtcaa aaaaactgaa cagctggtaa aaaaatattt cagtggctta aaaaatccac
    17341 ctgaagaaaa agaaagaacg ttcgcggatg tgccgggacg gacgaaagac gagagcatag
    17401 tagtcaccga caaggaggcg accaatttcg tgctcgaagt tgattacccg ttctatcaaa
    17461 taaagccgga agtaacggtc ggcgattatc gtaactggct tgtaaaaaat cttttcacat
    17521 cgatgctcaa tcaacgattg tctgaactta ccaggagcga taacccgcca ttcttatttg
    17581 cctcaacaag ttttaacagc tatgcaagag gctatgaggg cttcagtggc tttgcagtgg
    17641 ctggcaagaa cgggcctgat agtgcgctga gtgttttgat acgcgaaata gagcgcgtaa
    17701 aacaatatgg ttttacacaa gctgaattgg acagggcgcg caaaaggtct cttgctttta
    17761 tagaacaggc aaataacaac cgtaataaaa atgaatcgtc caatttcgtg caggactata
    17821 tcgataattt tctgacccag gagcctatac cgggcgtagc gactgaatac aattattata
    17881 accagttgtt gccaggcatc actctaaacg aagtgaacgc attaaccgaa cccctgaaac
    17941 aaaatccaca catttttgta agccttacag gcccgtctga aagcgattac aagctgccgg
    18001 ataacgcaac gcttttgcag aacacgtatg ctgcgcaaaa aacggctgtt gctccc
//
LOCUS       DASQJI010000550         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1910080,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000550 DASQJI010000000
VERSION     DASQJI010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910080"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VEV83_14960"
     CDS             <1..400
                     /locus_tag="VEV83_14960"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46476.1"
                     /translation="YNATGLAASTMYEFRVQTYCTADGFIKSKFSKIATFSTAAFAQN
                     AVQGEINTVRIYPNPAHAAFSVQINSIKNTKAVITVSNDVGSKLFSQTKTLIKGYNEF
                     SFSLSALSPGIYFVQIQTDEKVIQEKLVKD"
     gene            568..>1756
                     /locus_tag="VEV83_14965"
     CDS             568..>1756
                     /locus_tag="VEV83_14965"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46477.1"
                     /translation="MRKLLLLSAIALFVYESAFSQKQTKQKPPVNYDSLFHGLKWRNV
                     GPFRGGRANAISGVTGNDKIYFAGYTGGGVWKTDDGGITWRNISDNYFHTGSIGDIAV
                     SNSDPNVIYVGTGEHAVRGVMTSFGDGVYKSNDGGKTWKNVGLTNSRHISDVVINPNN
                     SDVVYVAAQGAVHGPNAERGVFKSTDGGQAWKKVLYVDENTGASSLVMDPTNPRILYA
                     ATWQHRRYPWKVESGGTGCAIWKSTDEGENWKKIIDGLPDQVGKIGLSVCRSNPNRVY
                     AIVEAEKSKAGLYRSDDGGKKWNLMSNDQNITSRSWYYMEVFADPKNQDVVYVLNAPM
                     MRSIDGGKTFSRVNVNHGDTHDLWINPNNSDNVAWADDGGGEITFNFGRTWSSLMNQP
                     TAQF"
BASE COUNT          527 a          352 c          426 g          451 t
ORIGIN      
        1 ttataatgca acaggcctgg ctgcttcaac aatgtatgag ttcagggtgc aaacgtattg
       61 tacagccgat ggctttataa aatcgaagtt cagtaagatt gccacattta gtacagcagc
      121 gttcgcgcaa aatgcagtgc aaggtgaaat taatacagtc agaatttatc caaacccggc
      181 tcatgctgca tttagtgttc aaataaacag catcaaaaat accaaagctg tgatcactgt
      241 cagcaatgat gtaggaagca aattattctc gcaaacgaag acgctcataa aaggatacaa
      301 tgaattttca ttttcgcttt ctgcattatc gccgggaatt tattttgtgc agatacaaac
      361 agacgaaaag gtgatacagg agaaactggt taaagactga tggttcgaac ctcgggacgc
      421 ttctaacaaa cagcaggcag atcggcgtgt gccgcatttg gcagggcgcc tcatgcagaa
      481 aatgagttga tcgacagatg gtgcagtttt catttgttac ttattcaacc gtcttcaata
      541 attttaacgc ctaaacgcta aatgcacatg agaaagctct tgctactttc tgctatcgct
      601 ttgtttgtat atgaatctgc attctctcaa aaacaaacaa agcaaaagcc accagttaac
      661 tacgattccc tttttcacgg attaaaatgg cgcaacgtcg gcccattcag gggcgggcgt
      721 gcgaacgcta ttagcggcgt aacgggcaat gataagattt attttgccgg ttataccggt
      781 ggcggtgttt ggaagactga cgatggcgga attacgtggc gaaatatttc tgataattat
      841 tttcataccg gttccatcgg tgatatcgcc gtttcaaatt cagacccaaa tgtgatttat
      901 gtcggaacag gtgaacatgc tgttcgcggt gtgatgactt ccttcggtga tggtgtttac
      961 aaatctaacg acggcggaaa aacatggaag aatgtcgggc ttacaaattc gcggcatata
     1021 tcagatgtcg ttatcaatcc caacaattct gatgtcgttt atgtagctgc acaaggagct
     1081 gtgcatggcc ccaatgcaga acgcggtgtt ttcaaatcaa cagatggcgg gcaagcctgg
     1141 aagaaagttt tgtacgtgga tgaaaacacc ggtgcaagca gtttggtgat ggacccaacg
     1201 aatcccagaa ttctttacgc cgccacatgg caacaccgcc ggtatccctg gaaagtagaa
     1261 agcggaggga cgggctgcgc gatatggaag agcacggatg aaggagagaa ctggaagaaa
     1321 ataattgacg gacttcctga ccaggttggc aagattggat tatctgtttg ccgctcaaat
     1381 ccaaatcgtg tatatgctat cgttgaagca gaaaaatcca aagcaggttt ataccgttca
     1441 gatgatggag gcaagaaatg gaacctgatg agcaacgacc aaaacatcac gtcgcgttca
     1501 tggtattata tggaagtatt tgcagatccg aaaaaccagg atgttgttta tgtgctgaat
     1561 gcgccgatga tgagatcgat tgacggtggc aaaacgttta gccgtgtgaa cgtaaaccat
     1621 ggtgatacac acgatctgtg gatcaaccca aataattcag acaatgttgc ttgggccgat
     1681 gacggtggcg gtgagatcac tttcaatttc ggaagaacat ggagcagttt aatgaatcaa
     1741 cccactgcac aatttt
//
LOCUS       DASQJI010000551         5779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_681326,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000551 DASQJI010000000
VERSION     DASQJI010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5779
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681326"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VEV83_14970"
     CDS             complement(<1..686)
                     /locus_tag="VEV83_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
                     /protein_id="HYK46478.1"
                     /translation="MTDQLEAIKARFEQVGVALTNPAIINNKKEFEKFSREYRQLEKI
                     VAPFEEYKKVTVEYDFAKDGLNSSDADMRELAKMELPELEEKKSALEKQLTKLLIPKD
                     PQDDKNAVLEIRAGTGGDEASLFAGDLLGMYLRYCGQKGWKTSIISENEGTVGGYKEV
                     VVEVSGEDVYGTLKFESGVHRVQRVPQTETQGRVHTSAATVAVMPEAEEVDFELNPAD
                     VKMETARSGGA"
     gene            820..2007
                     /locus_tag="VEV83_14975"
     CDS             820..2007
                     /locus_tag="VEV83_14975"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK46479.1"
                     /translation="MPYRKFKADLLFTGNHVLGQNSVLITNEDGVVQEIVQLTDAGDD
                     VEVFEGLLSPGFVNCHCHLELSHLKNVIEPGTGLVDFLIKVVSLRSSTDDEIQTAMLT
                     ADAEMFNSGIVAVGDVCNTNNSINVKLKSRIGYYNFIEVLGFTEDNARQRIAPYVSVY
                     KEFCDAGFASNSSIVPHAPYTVSPSMFQLIGDVSAGKIISIHNQESLAEDELYRNKTG
                     DFLRLYDQLHINTDFFQPCDNSSLQTYLPFLKKARKLILVHNTCTTQEDLDFALKQAV
                     KDGHPNYWCLCPNANMYIENKLPPVELLIQNRRNIILGTDSYASNTGLNILHEIKTLH
                     KNFPFVQMNDLLQWGTLNGAKALGMDDKLGSFEKRKQPGVLLISNLVNNNISTASTVS
                     RLL"
     gene            2265..4103
                     /locus_tag="VEV83_14980"
     CDS             2265..4103
                     /locus_tag="VEV83_14980"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46480.1"
                     /translation="MTKCLLFALGLLLSFTHLFAQETFQKSVGGTGNDYATSMAQTTD
                     GGFILAGDTYSFGLSKSDMYIVKFDNHGNLLWNKRFGGTDYDHANCVAATKDGGCVVG
                     GVSGGNNSSLVMLKINAAGNVEWSKFYSANTRHDAHAIAQTPEGGYVLAGSASTYNNG
                     SWGYVVKTDSAGNLEWSKFVFDRSFYPAVQQLVVTKDSGYAVVVNQKTTNGYYDIFLI
                     KLNKAGNFTWAKSIGDESTDFPSDLVQTSDGGYAVAGSTFDLNSNPQYSFMYVFKTDS
                     VGNFRFAKRIKGTNTDVCRTITETNDKQLLISGSIPSPSGTAKNIFATKIDTTGSVLW
                     TKILTDDVTSSEALDIVNTSDSGYAAAGFIGNSGKQDFLLARFDTGANICGATLGMGS
                     DSDFGKPATRVVNVTNANTTVSVTPYALIDADGIYASICDVLPVTLISFTATEKDNAV
                     RLEWVTAGEINTRSFELYRSSDGINYKLITTVAAHGSQAASTQYSFEDDQPSAGNNFY
                     KLKSVDRDGTYSFSEVRTIALSKILIKIFPNPVKDWMNVELNGVAGSTQLNIYSAEGK
                     LVLKKSATAQSGSIKQVLDIRNLTAGTYILQILTGDSKTQRLFIKK"
     gene            complement(4748..5485)
                     /gene="recO"
                     /locus_tag="VEV83_14985"
     CDS             complement(4748..5485)
                     /gene="recO"
                     /locus_tag="VEV83_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HYK46481.1"
                     /translation="MTHKTKGIVLRTIKYGETSVITAVYTELFGLQSYIVKGVRQTTK
                     KSEAKSGYFQAAAMLDMEVYHNELKNLQFIKEYKWSYLYQKVLFDVMRNTVAQFMIEL
                     FQRSIKQPEANPELFYLLEGSLLQADKGSDAIVANLPLYFTLHLATELGFQLHGTYTP
                     ATAVLDLQEGMFVDQSPSHSNYITDILAETASRIQHINFYNDLENIKLNRELRRQLLD
                     GLLQYISYHVTDFKELRSLPILQEILN"
BASE COUNT         1628 a         1237 c         1254 g         1660 t
ORIGIN      
        1 gcgccgccgc tgcgtgccgt ttccattttc acatcggcgg ggtttaattc aaaatctacc
       61 tcttcggctt cgggcattac ggcgacggtt gctgcagatg tatgaacccg cccctgcgtt
      121 tctgtctgcg gcacgcgctg cacacgatgc acaccactct caaattttaa tgtgccgtac
      181 acatcttcac ccgatacttc aaccacgact tccttataac cgccgactgt tccttcgttt
      241 tcactaatga tcgaagtctt ccatcctttt tggccgcagt aacgcaggta catgccaagc
      301 aggtcacctg caaacaagct ggcttcgtcg ccgccggtac cggcacgaat ttcaagtacc
      361 gcgttcttgt cgtcctgcgg atctttcggg atcaaaagtt tcgtcagttg tttttccagc
      421 gcagactttt tttcctccag ttcaggcagt tccatttttg ccagttcacg catatcggca
      481 tcgctgctgt tcaaaccgtc cttcgcaaaa tcatattcaa cagtgacctt tttgtattcc
      541 tcaaaagggg ctacgatctt ttccagctgc cggtattccc tgctaaattt ttcaaattct
      601 tttttattgt tgatgatcgc cggattggtt aacgcaacac caacctgctc aaacctggcc
      661 tttatcgctt ctaactgatc agtcatttta atagtttcac cgttctgagt ttaaaagttt
      721 caatgcctaa cagaacgctg aaatcgttgt aagattcaaa cttttaaact tcgaaaacga
      781 ggcgcaattt atatattttc atccgcttaa ttttacggca tgccttatcg aaagtttaaa
      841 gcggacttat tgtttacggg caaccatgtc ctcggtcaaa atagcgtctt gatcactaat
      901 gaggatgggg ttgttcaaga gatcgtccag ttaacggatg caggtgatga tgtggaagtt
      961 ttcgaaggcc tgctgtctcc tggatttgtt aactgccatt gtcatctgga attaagtcac
     1021 ctgaaaaatg ttatcgaacc cggcactggc ctcgttgact tccttatcaa ggtggtaagc
     1081 ctccgttctt caactgatga cgaaattcag accgcaatgc ttactgcgga tgcagaaatg
     1141 tttaacagcg gtattgttgc agttggcgat gtgtgcaata caaacaattc catcaatgta
     1201 aaattgaaaa gcaggatcgg ctattacaac tttatcgagg tacttggttt cactgaagat
     1261 aatgcgcggc aaaggatcgc cccctacgtg tctgtgtata aagaattctg cgacgcgggc
     1321 tttgcctcaa atagttcgat tgtgccgcat gcaccctata ccgttagccc ttcgatgttc
     1381 cagcttatcg gtgatgtttc cgccggaaaa ataatttcaa tccataacca ggaaagcctc
     1441 gctgaagacg aactctacag aaacaagacc ggcgattttt tgagactgta tgatcaactt
     1501 catatcaata cggatttttt tcaaccgtgt gacaacagca gcctgcagac gtatcttcca
     1561 ttccttaaaa aagccaggaa acttattcta gtccataaca cctgtactac acaagaggac
     1621 cttgactttg cgcttaagca agcggtgaaa gacgggcatc ctaattattg gtgcttatgt
     1681 ccaaatgcaa acatgtacat cgaaaacaag ctgccaccgg ttgagttgtt gatacaaaat
     1741 cgacgcaata tcatattggg caccgacagc tatgcaagca acaccggctt aaatatttta
     1801 catgagataa aaacacttca caaaaatttt ccgttcgttc aaatgaacga cttgcttcaa
     1861 tggggaactc tcaacggcgc aaaggccctt ggcatggacg ataaactggg gagttttgaa
     1921 aagagaaaac aaccgggtgt gttgcttatc agcaacctcg tgaacaataa cataagcacc
     1981 gcctctacgg tttcaagact actgtaacat ttatcctgtt ccaaaagata caaaagtttt
     2041 tttctatcag aaatagaatt aaatccagct gtaagaaatt gtattccagt atttttgaac
     2101 gaagcaaagg ctttagacat agataataac ctggaagttt tgaaaggaag caacccggtg
     2161 ttttgcttat tgtaacctgt tgaaaaatat aggcacactt tctactgtta taaggcggct
     2221 gcaaacaaca taagcaatca atttcatcaa tttaaaattc ccgtatgaca aaatgtttac
     2281 tttttgcctt aggccttctt ttaagtttta cccacctgtt tgcacaggaa acgtttcaaa
     2341 aatctgtagg cggcaccgga aatgattatg cgacatcaat ggcacaaaca acggatggcg
     2401 gctttatttt agcaggagat acttattctt ttggactttc gaaatctgat atgtatatag
     2461 tcaaattcga caatcatgga aacttgttat ggaataaaag atttggcggt acagattacg
     2521 atcatgcaaa ttgcgtcgcg gcaaccaaag atggagggtg tgttgttggc ggtgtgagcg
     2581 gaggtaataa cagctctttg gttatgctga aaataaatgc agcgggcaac gtggaatggt
     2641 caaaatttta ttctgcaaat accaggcacg atgcacatgc catagcgcag actcctgaag
     2701 gaggctacgt tttggcaggt tcggcctcta cctataataa cggttcttgg gggtatgttg
     2761 taaaaaccga cagcgccggg aatcttgaat ggtcaaagtt tgtttttgac agaagttttt
     2821 atcctgccgt ccaacaattg gttgttacaa aagacagtgg gtatgctgtg gttgtgaatc
     2881 agaagaccac taatggctac tatgatattt ttcttattaa gcttaataaa gcaggaaact
     2941 ttacatgggc aaaatctatt ggagacgaaa gcacagattt tcccagtgat cttgtgcaaa
     3001 cctctgatgg gggttatgca gttgcaggca gcacattcga tcttaatagc aacccacaat
     3061 actctttcat gtatgtattc aaaaccgaca gcgtcgggaa tttcagattc gctaagcgca
     3121 ttaaaggcac gaacacggat gtgtgcagaa cgataacaga aacaaacgat aaacagctct
     3181 taataagcgg aagcatcccc tctccatccg gcactgcaaa aaatatcttt gcaaccaaaa
     3241 ttgacaccac cgggtcggtg ttatggacga agatccttac tgatgatgta acttcatcag
     3301 aagccctcga tattgtaaat acaagtgaca gtggttatgc tgcggctggt ttcattggta
     3361 atagtggcaa acaggatttt ctgcttgcac gttttgacac cggcgctaat atttgcggtg
     3421 caactttggg catgggaagc gacagtgatt ttggtaagcc tgcaacccgg gttgtaaatg
     3481 taactaatgc aaacaccact gtatccgtta ctccgtacgc gcttattgac gcagacggta
     3541 tctatgcaag catctgtgat gttttgcctg taaccttgat ctcctttacg gcaacagaaa
     3601 aagataacgc tgttcgactt gaatgggtta cagcagggga aataaatacg agatcatttg
     3661 aactttacag gagcagtgat ggcataaatt ataaactcat tacaacggtt gctgcacatg
     3721 gctcgcaggc cgcatcaaca caatacagtt ttgaggatga tcagccttct gccggaaaca
     3781 acttttataa gttgaaatca gtggatagag atggcacata ttcttttagc gaagtaagaa
     3841 caattgctct cagcaaaata ttgataaaga tatttcctaa tcccgtgaaa gattggatga
     3901 atgttgaact caacggcgtc gcaggcagta cgcagttgaa catatactcg gctgaaggca
     3961 agttggtttt gaaaaaatca gcgactgctc agtcaggaag tattaagcag gtgctggata
     4021 ttcgtaatct tacagccgga acatatattt tgcaaatctt aacgggcgac tcaaagacgc
     4081 agcgcttgtt cataaagaag tgaaaaatat taacgtgctg tgctatttaa gattgagtcg
     4141 aatgatcgcg atgcttgcag tataatagtg tccgtagaag cacattccgg tcatagccgg
     4201 caaggtccac tatggtgagt cttttataac gataaaacat tttttcaccg tcatatccga
     4261 acggtggctt aatagatccg gaatgccaat gatcggatat ctcttaggat tttaggatgt
     4321 tggattgtgg attgaaacag ttgctaaata caatgtcgcc tattataaga aattcttcgt
     4381 tatataatgc tccgaaaatt ggggtttccg ctttcgcggg aatgacattg cgaggtgttc
     4441 agtttgaaat tgatttcgga tttcaatccc ggatggaaag gttatatttc ttggcctctc
     4501 aaaattaccc agagcagatg cccggtcggg ccgggcatga cggcgacgtg gttgctatat
     4561 attccggcaa caaactagcg taacagaatt tttcgtggtg gatcttaatc gcgaattgat
     4621 tttcttcctg tattcttcgt ggcttcgaga cctggtggtt caaattttac aaaccaccag
     4681 ggcggcaagg cacgaagttt cacgaagttg aattgaactt catgattttt taaatttgat
     4741 agcctcctta atttaatatt tcctgcaaaa ttggaaggct tcgcaattct ttgaagtcag
     4801 ttacatggta agaaatgtat tgaagcaaac catcaagtag ttgtcgtcgc aactcgcggt
     4861 tcagtttaat attttccaga tcgttgtaga aatttatatg ctgaatcctg gacgcagttt
     4921 ctgcaagaat atctgtaata taatttgaat gggatgggct ctgatcaaca aacatgcctt
     4981 cctgcagatc aagcaccgcc gtggctggcg tgtacgtccc atgcagttga aatccgagct
     5041 cggttgcaag gtgcagggtg aaatacaaag gcaggttcgc aacaattgca tctgaccctt
     5101 tgtcggcttg tagtaaactt ccttcgagca aataaaacaa ttcaggattt gcctccggct
     5161 gcttaatgct gcgctgaaac aattctatca tgaactgggc gacggtatta cgcattacgt
     5221 caaaaagaac cttttggtac aaatagctcc atttgtattc tttaatgaac tgcagattct
     5281 taagttcgtt gtgatacact tccatgtcaa gcatcgccgc tgcttgaaag tagccgcttt
     5341 tcgcctccga tttttttgtg gtctgacgaa cgccctttac gatataactc tgtaagccga
     5401 aaagctcagt atacacagca gtgatcacac tcgtttcacc atatttgatg gtgcgtaaga
     5461 caatgccttt cgttttatgt gtcatgctgt ttcacgcgaa gcttccaagt tacgcaaaga
     5521 cggaacgatt tgtttgaagt ctcttgagat tggagaacga ggaaagataa taaagactga
     5581 cggggttgct atcatacagt gtcacggtaa cgtgcaacct gcggcttgca actactctac
     5641 atccttcaca cagcgaaatc caacatggca caggccactc tcaggtgttg aatgtgccgt
     5701 attgccaatc ttgtatccat ggcacacctg ccaatcacag agacaggatc cacccatttg
     5761 tagcttttcg gctgtttga
//
LOCUS       DASQJI010000552         5346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_375579,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000552 DASQJI010000000
VERSION     DASQJI010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375579"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VEV83_14990"
     CDS             <1..259
                     /locus_tag="VEV83_14990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HYK46482.1"
                     /translation="GMLSFELKDDSAAELKRVVSSTKIISLAESLGGVESLINHPATM
                     THASIPKEERLKNGLKDSLIRLSVGIEDAEDLIDDLRLAIG"
     gene            complement(409..1584)
                     /locus_tag="VEV83_14995"
     CDS             complement(409..1584)
                     /locus_tag="VEV83_14995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46483.1"
                     /translation="MQLTDVTNAALAKKFLAVNVLMNKNNGNYIRPLDSEVNDIFDAA
                     RNKTFKYGEAKRWILQDDSGRLIGRIAAFTNSKYVNHGTEFPTGGIGFFDCINDDAAA
                     KKLFDIAKEWLQSKGMEAMDGSINFGDRDKWWGVMVEGFDREPIYGMPFNPPYYDKLF
                     ETYGFKNYYNQYYYAMGVRDQLPPRFAERYQKFKSKPGYEARYISRKNLEKHAEEFAT
                     VYNAAWAQHGEAKEIRPKDVMRLFNKMKAVMDERLIWFAYYKDEPIAMWINIPDLNQY
                     FKHFNGKLGLIEKLRLLWMKKNHACKVFTGVAFGIVPKFQSLGIDSFMIYEASLIIQP
                     DHRYEKYEMGWAGDWNPKMVNIYKSLGASQSRRMVTYRYIFDESKHPFERHPVMEYK"
     gene            1715..2200
                     /locus_tag="VEV83_15000"
     CDS             1715..2200
                     /locus_tag="VEV83_15000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK46484.1"
                     /translation="MTERDYNECVNLYADNVFRFIVKNIRHEEDARDIVQTAFEKLWR
                     NRESVDAGKTKSYLFTVAYNQMIDHIRKTKRIFLKEDFTAETKVYHQPVSNLKKNLQD
                     ALNILNETQKSLVLLKDYEGYSYEEIGKITGLNESQVKVYLHRARLNLRNYLVKPENV
                     I"
     gene            2215..3327
                     /locus_tag="VEV83_15005"
     CDS             2215..3327
                     /locus_tag="VEV83_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46485.1"
                     /translation="MKTINRYNYEEFFFLYVDDELDAERREEVEKFVQENADLSVELD
                     MLMQTRMMPDNAVVFTNKDNLIRTEGDGINETNYEEYFLLYIDNELSSSKRQEVETYI
                     LQHPRLQDEFTLLKQAVLQTEIVTYRNKEELYRREPRRVVRLKPWRLAAAAVFIGVCA
                     VGWWMIDRSSSTTPVADVPKTTQEPRKNTEPSKPVTEQPKSAQNEVPNQQTASIDKKV
                     EPIGRTEKRETVSQRDEKQTSSNKQVQSQNNEGQNDNVAQNKQPDIVTHDIAKEPVID
                     HTNQVGTELPEVAQKIEPASNDNASYNVYPVAYKVIDPNDDDQSVHVAMLDLNKNKVK
                     SFLRKAGRLFNNKSSDLANEDGKLQVANFEIETNKQ"
     gene            3347..4258
                     /locus_tag="VEV83_15010"
     CDS             3347..4258
                     /locus_tag="VEV83_15010"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK46486.1"
                     /translation="MKRILLAGFIMLSSLVTIAQTDTTGNSPGARTDTTGINSGDTVR
                     VGNFLIVRKKGATDNYNPPKRSDYLIINIPHKHVYHSESPSRSRISTNYLIFDLGFAN
                     YRDKTDYSSQEAMDYLKYDPANEQPFQKEDLKLIPEKTSNVNIWWFMQKLSLTKDGAV
                     SLKYGLGLEMYNIRYKYNISYNEKPPYIYRDTLDFSKNKLYIDYATIPFMLNINPGPD
                     PRHGLSMSIGMSAGYRLGSHTKQISDERGKVKNHGDMGFDPWRVAYVAEVGLGPVRVY
                     GSYSITPLHDQGLKQYPYVIGVRFSNW"
     gene            4524..4742
                     /locus_tag="VEV83_15015"
     CDS             4524..4742
                     /locus_tag="VEV83_15015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46487.1"
                     /translation="MDTENKIETDSLTLQMRFNHEKHTCPMCCLELWNVPPSFFEGEF
                     AENSMFANGSIIAVNPTMCNNCGLKVIH"
     gene            4825..5346
                     /locus_tag="VEV83_15020"
     CDS             4825..5346
                     /locus_tag="VEV83_15020"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HYK46488.1"
                     /translation="MRKMAFPAAVFATFVLCTSFHSTQLYNSPYYIVIDKSQYELSVF
                     DSKGWLITYPVVFGSNDLRDKLYEGDRKTPEGTFTIVEKKVHNKWDRFMGLNYPTPES
                     YQKFTERKQEGIIPGSAKIGGGIGIHGTWPHEDFQVDRYRNWTDGCISMRNKDVEELY
                     NMVPVGTQVMIRL"
BASE COUNT         1632 a         1112 c         1182 g         1420 t
ORIGIN      
        1 cggcatgctt agttttgaat taaaagatga cagcgctgca gaactcaaaa gagtcgtgtc
       61 gtcaacgaaa attatttcac tcgcagagag ccttggcggt gtcgaaagtt tgatcaatca
      121 cccggcaacc atgactcatg catcaatacc gaaagaggaa aggctgaaga acggtttaaa
      181 ggattcgctc atcaggttga gcgtaggcat tgaggatgca gaggatctta ttgacgatct
      241 tagactcgcg atcggataac atagctccag gtatctttgc ccatcgatgc tgaaaatttt
      301 caatgtttaa tttgcaatga tcaacgttca atttagatgt aaaccgttta ctataatcgt
      361 ttcattggtc attgaaacat tgagcgttta ttattgaaaa ttaccggact atttgtactc
      421 cataaccggg tgtctctcga acggatgttt gctttcatca aagatatatc ggtacgtgac
      481 catacgccgg ctttgtgatg cgcctaggct cttgtaaatg tttaccattt ttggattcca
      541 atcgccggcc cagcccattt catatttctc atacctgtga tcgggttgaa tgattaaaga
      601 cgcttcatat atcatgaacg aatcgatgcc caacgattga aattttggaa cgatcccaaa
      661 agcaactccg gtgaagactt tgcacgcatg attttttttc atccataaca aacggagttt
      721 ttctatcaaa ccaagtttcc cgttgaaatg cttgaagtat tgattcaggt caggaatatt
      781 gatccacatc gcgatgggtt catctttgta ataagcaaac caaataaggc gttcgtccat
      841 cactgccttc atcttgttaa atagtctcat tacatctttc ggccggatct cttttgcttc
      901 accatgctgt gcccaggctg cgttgtaaac tgttgcgaat tcctcagcat gtttttcaag
      961 attttttctg ctgatatacc tcgcttcata cccgggtttc gatttgaact tctgatatcg
     1021 ctcagcaaag cggggaggca actggtcgcg cacgcccatt gcataataat attgattgta
     1081 ataatttttg aaaccgtaag tctcaaaaag cttgtcatag tacggcggat tgaaaggcat
     1141 gccgtagatc ggctccctgt caaacccttc caccattaca ccccaccact tatcacgatc
     1201 accgaagttg atggagccgt ccatcgcctc cattcctttg ctttgcagcc attcttttgc
     1261 gatgtcaaac aattttttcg ccgcggcgtc gtcattgata cagtcgaaga agccaatgcc
     1321 gccggtcgga aattcagtac cgtgattaac gtatttagag tttgtaaagg cggcaattct
     1381 tccaatcaac cgtccactat catcttgcag tatccacctt ttcgcttctc catatttgaa
     1441 agtcttattc cttgccgcat caaaaatgtc gttcacttca ctatcaagcg gacggatata
     1501 gtttccgtta ttcttattca tcagtacgtt taccgcaaga aactttttgg ccagcgctgc
     1561 gttcgtaaca tcagtcagtt gcatgaggcg aaaataatca ggtttcgatt ttatacttca
     1621 aattttcgtg cgcgtgtaac ttttaaagcc ggcaatcgta caattaatca aagtttagtt
     1681 acattactaa ttttacagct attaacgggc atttatgact gaacgggact acaatgaatg
     1741 cgttaatctt tatgctgata atgtgtttcg ctttattgtg aagaacataa ggcatgaaga
     1801 ggatgcaagg gatattgtac aaactgcttt tgagaagcta tggcggaaca gggaatcggt
     1861 agacgcagga aaaacgaaat cttatctttt tacagtggct tataaccaga tgatagatca
     1921 catcaggaaa acgaaaagga tctttttgaa agaagatttc acggcggaga cgaaggtcta
     1981 ccatcaaccg gtttcgaatt tgaaaaagaa tttgcaggat gcactaaaca tattgaatga
     2041 gacacaaaag agcctggtgc tgctgaagga ttatgaggga tatagctacg aagaaattgg
     2101 taagattacg ggcctgaacg aaagccaggt aaaagtgtac ctgcaccgtg cgaggctgaa
     2161 tctgcgaaac tatcttgtaa agcctgaaaa cgtgatatag taaaacaaac gaagatgaaa
     2221 acgatcaaca ggtataatta cgaagagttc tttttcctct atgtggacga tgaactggac
     2281 gcggaaagaa gagaggaggt tgaaaaattt gttcaggaga acgctgacct ttcagtagag
     2341 ttagatatgc tgatgcaaac gagaatgatg cctgacaatg cagttgtatt tacaaataag
     2401 gataacttga tcagaacgga aggcgacggg attaatgaaa caaactacga agagtatttc
     2461 ctattatata tcgataatga attaagcagc tcgaaaagac aggaagttga aacctatatt
     2521 ctgcaacatc cacgtctcca ggacgagttt actttactga agcaggcggt gctgcaaact
     2581 gagatcgtta catatcgtaa taaagaagaa ttatatcgca gggaaccgcg gcgcgttgtt
     2641 cgtttgaagc catggcgttt ggcggccgcg gctgttttca ttggtgtgtg tgcggttggg
     2701 tggtggatga tcgacagatc ttcttcaacg acgccggtag cggatgtgcc aaaaacaacg
     2761 caggagccgc ggaagaatac tgaaccgtcg aaacccgtta cggagcaacc aaagagcgct
     2821 caaaatgaag ttccgaatca gcaaactgca tcgattgata agaaagtaga accgatcggt
     2881 cgtactgaaa aacgggaaac ggtgagtcaa agagacgaaa agcaaacttc ttcgaataag
     2941 caggtccagt cgcaaaacaa cgaagggcag aatgataacg tcgcccaaaa caaacaacct
     3001 gatattgtaa cgcacgacat agctaaggag ccggttattg atcatacaaa ccaggtgggc
     3061 actgaattgc ccgaggttgc acaaaagatc gaaccagcaa gcaatgataa cgcctcgtat
     3121 aatgtttatc ctgttgctta caaagtgatc gatccaaacg atgacgacca gtctgtgcac
     3181 gttgctatgc tggacctgaa caaaaacaag gttaagagct ttctgagaaa agcaggccgc
     3241 ttattcaata acaaatcgag tgatctcgcc aacgaagatg gcaagctgca ggttgccaat
     3301 tttgagatag aaaccaataa acaataacca caaatttcgg atacaaatga aaaggatttt
     3361 actggcagga tttatcatgc tgtcatcttt ggtaaccatt gcgcaaaccg atacaacggg
     3421 taatagcccg ggggcccgaa ccgatacaac aggaattaat agcggcgata cggtgcgtgt
     3481 tggaaacttt cttatcgtta gaaaaaaagg tgctacagac aactacaatc caccaaaaag
     3541 aagcgattat ctcatcatca atattccgca taaacatgta tatcatagtg agtcaccaag
     3601 tagaagcagg atcagcacga actatttgat cttcgatctc gggttcgcga actaccggga
     3661 taaaacagac tacagttcac aggaagcaat ggactatcta aaatatgatc cggcaaatga
     3721 gcagcctttt caaaaggaag atctgaagct tatcccggaa aaaacgtcaa acgtgaatat
     3781 ttggtggttc atgcaaaagc taagtctcac gaaagacggg gcagtaagcc tgaagtacgg
     3841 actgggcctt gaaatgtata atattcgtta caagtataac atttcctata acgaaaagcc
     3901 gccttatatc tacagggaca ctttagattt ttcaaagaat aaattatata tcgattacgc
     3961 aacgatcccg ttcatgctta acattaatcc gggccctgat ccgcgtcatg ggttgagcat
     4021 gagtataggc atgagcgcgg gctatcgcct cggcagccac acaaaacaga taagcgatga
     4081 acgtggcaaa gtgaagaatc atggcgacat ggggttcgat ccctggcgtg ttgcgtacgt
     4141 tgcagaagtt ggtctcggcc cggttcgcgt gtacggtagt tatagcatta caccgttgca
     4201 cgaccaggga ctaaaacaat acccgtacgt aatcggggtg cggtttagta actggtgatc
     4261 accaccaata ctaaaatcta attaattgga taattaacgc ggtcaactcg ttactctgtt
     4321 cagtctgcaa ggctccgtat atgcggggct ttgcgttttt tgaaaaaccc tcacggccgc
     4381 tgatgtgaaa aagtttttag taactagtat acttttttat tttctctaac gtattttagt
     4441 taaaccaaac tgattgcata caaccaaata aacttaaaac ttcttctatc gtttactcag
     4501 gaagtttaca caaaaatcat ttcatggaca cagaaaacaa gattgaaacg gactcgttaa
     4561 cgctacaaat gcgtttcaat catgaaaaac atacatgccc gatgtgctgc ctggagcttt
     4621 ggaacgttcc gccttcattt tttgaaggag agtttgcaga aaatagtatg tttgctaacg
     4681 gttcgatcat cgctgttaat cccacgatgt gcaataactg cggcttaaaa gtcattcatt
     4741 gattgcatcg ccagacttaa atttttttta ttttcacaca ctcaaaaaaa atctgattcg
     4801 tttaatgttg gaaaaacccc aggtatgagg aaaatggcat tccctgctgc cgtcttcgcg
     4861 acattcgttt tatgcacttc ttttcattca acccagttgt acaattcccc gtactacatt
     4921 gtgatcgata agagccagta tgaactaagc gtctttgatt ccaaggggtg gcttattact
     4981 tacccggttg ttttcggcag caatgacctt cgggataagc tgtatgaagg cgaccgaaaa
     5041 acgccggaag gaacctttac catcgttgag aaaaaagtgc acaacaaatg ggaccgcttc
     5101 atgggactga attatcccac ccctgaaagc taccagaagt ttacggagag aaaacaggaa
     5161 ggtattatcc cgggctcagc gaagatcggc ggaggaatag gcattcacgg cacgtggccg
     5221 cacgaagatt tccaggttga ccgctaccga aactggacag atggctgcat aagcatgcgg
     5281 aataaagatg tggaagaact gtataatatg gtgcctgttg gcacgcaagt gatgatcagg
     5341 ctctaa
//
LOCUS       DASQJI010000553         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2065905,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000553 DASQJI010000000
VERSION     DASQJI010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2065905"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VEV83_15025"
     CDS             complement(<1..316)
                     /locus_tag="VEV83_15025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HYK46489.1"
                     /translation="MKLKITGKQLRSIGYPEGPVISVAINTMEKHYKHHSLDDALAVL
                     KNVLADPATFATDPMLGNIAKMLLPKEKPESAEISLNQSGIPFNIFGAEYIEQGALHQ
                     MYS"
     gene            complement(377..2154)
                     /locus_tag="VEV83_15030"
                     /pseudo
     CDS             complement(377..2154)
                     /locus_tag="VEV83_15030"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
BASE COUNT          655 a          612 c          549 g          851 t
ORIGIN      
        1 cgctgtacat ttgatgcaat gcgccttgtt caatatactc agcgccgaat atgttgaaag
       61 gaattccgct ttgattcaaa gagatctcag cgctttcagg cttctctttt ggtaaaagca
      121 ttttagcaat attgccgagc atgggatcag tagcaaacgt tgccgggtcg gcgagaacat
      181 tttttaaaac cgctaaagca tcgtccagtg aatgatgctt ataatgtttt tccatcgtat
      241 ttatggcaac gctgatcaca ggtccctcgg ggtagccgat agagcgcaat tgtttgcccg
      301 ttattttgag tttcatgccc taaatcccta agggactttt taaattgttt ataatttaag
      361 ttcgttcgtt ttagagtcaa tcgcgttttt gcaccgaatc ataaaactgc ttcatcacaa
      421 aaaatgcttt tttcttttgc ccggtggagc tgatcaaacc cttcctgttc cagccgtcct
      481 ggtaagctgg attcaatctt tttggcgaac gaaaatcgac gagtatccat ggagatgttc
      541 cccgtaaacc gtcaatcgtg gttattagct taagctggtt ttgaaaaaat gattcctggt
      601 attcttcgct ccacctggtg gccgcatctg cacgatagcc tccgagtgcc tccgctccaa
      661 attcacttat aataaccggt ttgtcgtaat tgatcttaaa actgtattta ctgatttcct
      721 tcggcaggcc gccaacatac cagccataat actcattgaa gcttactaca tcaactttgc
      781 tgccgagcgg atcgttgagt tctattacat tatttttttc gtctgcgagc aatgctgcag
      841 acacgagtct tgtgtcatca agaagtcgca cgtgcgatgc aagactctcc ataaattttt
      901 cccgtgcatc agtcgcaggt gtttcattcc cgatcgacca gatgaccacg ctggcccggt
      961 tcttatctct tgtgatcaat tctgatagtt ggtgttttgc attgctgagc gtcgaatcat
     1021 ttgtccagtc ttgtcccagt acaccggcac ttctgcccac aagatcaatc ccatttcatc
     1081 tgcaagttta cttgtgtatt cagtgtgcgg gtaatgcgca agccgcacaa aattgcagtt
     1141 catttctttt gcccattcaa gcaacattct gatgtctgct tgtgatcggg gcctgccggg
     1201 tatgaaagga tcttcttcat gcaggcaaac gcctcttagg aaaattggtt tgccatttaa
     1261 cacaatgtct tttccttttg ttattatcgt tcgaaaacca atatgatctt ttactgtatc
     1321 tgtttgcgaa gtgatgataa catcgtacac ttttggatga tcgggcgacc agtattctaa
     1381 attcttcgca ggcaagctga aatttacttt gccatttgca tccgctgttg cttccagatc
     1441 caggcctgct tccggaattt taatatttat tttttgagcg ggagggttgc catccagttg
     1501 aacatatcct gttatcgtcg tgctgtcgcc ttttgcaagt tgaattttgt agtcgttaat
     1561 aaaactgaca ggcatttctg ccactacaac atcccttgtg atgcctccgt aattccacca
     1621 gtcaaaattt aaagtaggca ctgactcttt gtggcgtgta ttgtctgctt ccacgacaat
     1681 aaaattgttt ccatcctgca acaggttggt cacctcaaat tgaaaaggag taaagccgcc
     1741 gacgtgtttt cctaattctt ttccattcaa ataaacatgc gcttcataat tcaccgcgcc
     1801 gaaattgaga aagtaacgca tgcctggttt gcgctgcaca tcgaagtcat gttcatacca
     1861 aaccgttcct tcatagtatg acagtttttc attctgcgaa ttccagtcgc cgggaactgt
     1921 caacgtaggt gcagcattga aatcatactc gatgaactcc gattgcgact tcggtttcct
     1981 gttcaaataa aattttgagc cctcacctgt tttgtatgga tcgatgatat aatgccaccg
     2041 cccgtcgagg ttgtaaatat ttcgagcttt gatattttgg atgagatcag cttgcgccgg
     2101 cacattatag aagagtaccg ctacgaaaaa taagagtaga gaaattcgta tcatgtgttg
     2161 attacattat tgatattgaa aatacattgt ttttatgatg tgacttttcg ttccaaagtt
     2221 ttgttgatcg catccggcag ttgcgcgtcg ccgcttcggc ggagcaacgt ggcacgcttg
     2281 tacgttcgga actttgagta agatttgcgc gctttcgctt aattcagaca ataaggacag
     2341 gccacaaagt gcacaaagga tcacaaagta cacgaggtgg tgctcgttgt gtttccatat
     2401 tcttcgagat aattggcgca aagcctgata tcatcactaa acgtacgtcc agaatttctt
     2461 ctccaacgca aagcagcggc acacggtagc accgctgctg catctttata ttcctttact
     2521 tctggaccga agatctcctt caacgattga tgaggaaacc tttacagcta aaactaatgc
     2581 tcctcatttt gcctgcgatc tttcaacatg ttcgctttcc tcgagtttga acaacatgtc
     2641 gttgttttcc gtctcgttcc tggtgtt
//
LOCUS       DASQJI010000554         3575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2986759,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000554 DASQJI010000000
VERSION     DASQJI010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2986759"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VEV83_15035"
     CDS             <1..962
                     /locus_tag="VEV83_15035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46490.1"
                     /translation="LGPADPSVLLLIKPGDTVQVDNSNFLAVQTYHRHQVPASSVEYP
                     EWNQFRDSTGMPLYPQRPMQLGPMFTMGAAGVLPTGKFKGKMILLESLWDREAFPWQA
                     DWYRSKVKEHLGDSTDNYFRLWYTDHALHGDIAREDDPTHTVSYLGVLQQALLDLSTW
                     VEKGIPPASTTNYKIVDGQVIVPATAEERKGVQPVVTVKVNGGKRADVKVGQQVTFTA
                     VIEVPKNMGKVVAASWNFEGLPADVEKSAGWNFEASDIFPVKAKFVPSDKTGSRVTVT
                     TTHSFSKAGTYFPTLRVASQRNGDSKTPFTRIENLDRVRVVVE"
     gene            1148..2008
                     /locus_tag="VEV83_15040"
     CDS             1148..2008
                     /locus_tag="VEV83_15040"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK46491.1"
                     /translation="MKKFLFGLIILSSFHSNAQTVIPLYNGAAPGSENWNWNEKEIKA
                     EIGTIVMDVSHPSLTAYIPANPNGTAVIIAPGGAFHVLAFDLEGTEVAKRLNAKGITA
                     FVLKYRVVHDDPAHPENSIGNLFATKNFKKLDSLNAPVVPLAMQDGLAAVKYVRQHAA
                     DYKIDPNKIGFMGFSAGGTVTMSVVYSATDDSRPNFVAPIYAYEGAIIGSNVPSAKTP
                     IFITAASDDDLGLATHSVHIYSKWLDAGQPAELHMYEKGKHGFGMKKQNLPVDSWIER
                     FEDWLATHGF"
     gene            2044..>3575
                     /locus_tag="VEV83_15045"
     CDS             2044..>3575
                     /locus_tag="VEV83_15045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-arabinofuranosidase"
                     /protein_id="HYK46492.1"
                     /translation="MNRNRLQFHHLVAILMAFVLHVAAIAQNKTPITVQADKPVAAIQ
                     PTMWGIFFEDINMGADGGLYAELVMNRSFEFYKPMMGWTVQPVGDMPFAPFQKQFTEG
                     TVIVVNRQEKNTTNPRFIRITANNSSKRGLGLTNSGFNSMGIKKDVRYNFSFMYRQQT
                     AGVKLYVELVDSTGKNLGGTSVIPSATGTEWQKATANFTAATTEPKAKLNIWFEGNGV
                     IDLDMISLFPADTWKNRPGGMRSDLVQLLADLKPGFIRFPGGCIVEGYDLSTRYQWKK
                     TIGPLEDRQLIINRWNAEIANRPTPDYFQSFGLGFFEYFQLAEDIGAEPLPILNCGMA
                     CQFNSAEVAPVEQLSSYVQDALDLVEFANGDANTKWGAVRARLGHPAPFNLKMIGVGN
                     ENWGPQYVERLKVFQKALKEKYPEIKIVASSGAQYEGDMFTYLNDQFKTIKPDVVDEH
                     YYSSPTWFFQNASRYDNYARTGPKIFAGEYAAQSDRVVSIENRNNLRTAISEAAFMTG
                     LER"
BASE COUNT         1031 a          737 c          865 g          942 t
ORIGIN      
        1 ctcttgggcc cgctgatcct tccgtacttc ttctgattaa gccgggggat actgtacagg
       61 ttgataattc taattttctt gctgtgcaaa cgtatcatcg acaccaggtg ccagcgtcaa
      121 gcgtagaata tcctgaatgg aaccagtttc gtgattctac cggcatgcct ctctatccgc
      181 aacgaccaat gcagttgggc ccgatgttta caatgggcgc tgcaggcgtg ttgccaacag
      241 gtaagttcaa aggcaaaatg atccttcttg aatcactttg ggatagagaa gcttttccgt
      301 ggcaggcgga ttggtatcgt tcgaaagtaa aggagcattt aggtgacagt accgacaatt
      361 atttcagact ctggtacacc gatcatgcac ttcatggaga tattgcacgg gaggatgacc
      421 ctacgcatac tgtcagctat cttggggtgt tacaacaggc actgcttgat cttagtacat
      481 gggttgaaaa aggcattccg ccagcgagta caacgaatta taaaatagta gacggtcagg
      541 tgatcgtacc tgcaacagca gaagagcgca aaggcgtaca acctgttgta acagtaaaag
      601 taaatggcgg taaacgggct gacgtgaaag ttggtcagca ggttaccttc accgcagtaa
      661 tagaagtacc caaaaatatg ggtaaggttg ttgcggcttc atggaatttt gaaggtttgc
      721 cggccgatgt tgaaaaatca gccggttgga attttgaagc atcggatata tttcccgtaa
      781 aagcaaagtt tgttccttct gacaaaaccg ggtcacgtgt aacagtgacg acgactcata
      841 gcttctcaaa ggccggaact tattttccaa cattgagggt agcatcgcaa cgcaacggcg
      901 acagtaaaac gccttttacc cgtattgaaa atcttgaccg tgtgcgcgtg gtggttgagt
      961 aaaggcgcgc gtggctggca ataaaagata cctcgcatta tttgcggaag gtgcggacgc
     1021 gttttatgca tctcctctta aaatcagcga agtggcgaac aatttatatt ttgactggat
     1081 aaagaaaatt attgcagcaa caaactaaca ttttaacttc cggtttattt ggttttaaaa
     1141 taccgccatg aaaaaattcc tgttcggctt aattatactc agctcatttc attcaaatgc
     1201 acaaacagta attccattat acaatggcgc agcgcccggc tccgaaaact ggaactggaa
     1261 tgaaaaagaa attaaggctg agattggaac aattgtaatg gatgtttcgc atccatcgtt
     1321 aacagcgtat attcctgcaa atccaaatgg aactgccgtt attattgcac cgggaggcgc
     1381 atttcatgtg cttgctttcg atcttgaagg aactgaagtt gccaaacgct taaatgcaaa
     1441 aggcatcaca gcttttgtat tgaaatatcg cgtagtgcac gatgacccgg cgcatcctga
     1501 aaatagtatt ggtaatttat ttgcgacaaa gaattttaaa aaacttgatt cgcttaatgc
     1561 acctgttgtg ccgcttgcca tgcaggatgg attggctgcg gtaaaatatg tgcgccagca
     1621 tgctgccgac tacaagatcg atccaaataa aattgggttt atgggatttt ctgccggagg
     1681 tactgtaacg atgtcggtag tgtatagcgc cacagatgat agccgtccga attttgttgc
     1741 gccgatctat gcctatgagg gcgcaattat cggctccaat gttccttctg ctaagacgcc
     1801 tatctttata acagccgcaa gcgacgatga tctcggtttg gcgacgcaca gcgttcacat
     1861 ttattcgaaa tggttggatg cgggtcaacc ggcagagttg catatgtatg aaaaagggaa
     1921 acatggattt ggaatgaaaa aacaaaatct tcccgttgat tcgtggatag aacgttttga
     1981 agattggctt gctacgcacg gattctgaac agtaaatcat cttaactaat tttcgacgat
     2041 atcatgaata gaaatcgatt gcaattccat cacctggttg cgatattgat ggcgtttgtc
     2101 ttgcacgtgg ccgcaatcgc gcaaaataag acgcctatta cagtgcaggc tgacaagccg
     2161 gtcgcggcaa ttcaaccaac aatgtgggga attttttttg aagacattaa tatgggtgcc
     2221 gatggcggac tttatgctga gcttgtgatg aaccggtcat ttgaatttta taaaccgatg
     2281 atgggctgga ctgtgcagcc ggtgggcgat atgccctttg caccgtttca aaagcagttc
     2341 actgaaggaa cggtgattgt tgtaaacagg caggaaaaga ataccaccaa ccctcgcttt
     2401 attcgaatca ctgcaaataa cagctcaaaa agaggactcg gtcttaccaa ctcaggcttc
     2461 aatagtatgg gaattaaaaa agatgtgcga tacaatttct catttatgta ccgtcaacaa
     2521 actgcaggag taaagttgta tgttgaatta gttgattcaa ccggcaaaaa tcttggaggc
     2581 acttccgtca taccttcagc gacaggaacc gagtggcaga aagcaaccgc aaactttaca
     2641 gctgctacaa cagaaccgaa agcaaaattg aatatttggt ttgaaggaaa tggagtgatc
     2701 gatcttgaca tgatctcatt atttccggca gacacatgga agaacaggcc gggtggaatg
     2761 cgatcggatc ttgtgcaatt acttgccgat ctgaaacccg gtttcattcg tttcccgggc
     2821 ggctgcattg tggaaggcta tgatctttct acaaggtatc aatggaagaa aacgattggc
     2881 ccgttagaag accgccagtt gatcatcaac aggtggaatg cggaaattgc gaatcgtcca
     2941 acgcctgatt actttcaaag ttttggttta ggtttctttg aatatttcca actggcagaa
     3001 gacatcggcg cggagccatt accgatcctc aactgcggaa tggcgtgcca gttcaattca
     3061 gcagaagtag cgcctgttga gcaactcagc tcttacgtgc aggatgcgct tgacctggtt
     3121 gaatttgcca atggcgatgc gaatacaaaa tggggtgccg tgcgcgcaag acttggacat
     3181 cccgctccat tcaatttgaa aatgatcggt gttggaaatg aaaactgggg gccgcaatac
     3241 gtcgagcgat taaaagtttt tcaaaaggct ttaaaagaaa aatatcctga aataaaaatt
     3301 gtcgcaagct ccggcgctca atacgagggc gacatgttta catatttgaa tgatcaattc
     3361 aaaacgatca aacctgacgt cgttgacgaa cattactaca gtagtcccac gtggtttttt
     3421 cagaatgcaa gccggtatga taattatgcg cggaccggcc ctaaaatatt tgccggtgaa
     3481 tatgcagcgc aaagcgatag agtggtgagt attgaaaaca ggaataattt gcgcaccgca
     3541 atttcggaag cagcgtttat gaccggcctt gaacg
//
LOCUS       DASQJI010000555         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2679768,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000555 DASQJI010000000
VERSION     DASQJI010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2679768"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VEV83_15050"
     CDS             complement(<1..950)
                     /locus_tag="VEV83_15050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46493.1"
                     /translation="MSTTMTQEYKAELIVDLLANRISMDNLRNLRQEVDADDLATIIQ
                     HIYDLNETYILKLSAVEGILRKLNTIKNQNRNEQFRRKIKKGWRDINDKSKKVVLAEG
                     DSWFNYPVILTDIIDRIGMEKDLAVYSIAAGGDWLLNMLTGREYVEELSVLHPDVFLI
                     SGGGNDLVGARRLATILAPVGNSAEFQHCEWAQQLVANANTRFIPFEERFNEGVKHLS
                     KDFYALLMFFHLQYYFLINGILTAGGGTPKFDDITIITQGYDYPIPSYKKGFGINIAK
                     WYVPFIRMFLGHGSWLKTPLLIRGITNQQIRENILYAMIYL"
     gene            1251..1508
                     /locus_tag="VEV83_15055"
     CDS             1251..1508
                     /locus_tag="VEV83_15055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46494.1"
                     /translation="MKTELLFRNFIVMSQFKISKELETDKLNAQLNELIAGIVRNQSK
                     RTLEKLDEIDRIRSKIESKQAELSEIKCAASGNRTTTSKVA"
     gene            complement(1766..2527)
                     /locus_tag="VEV83_15060"
     CDS             complement(1766..2527)
                     /locus_tag="VEV83_15060"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HYK46495.1"
                     /translation="MNKLSNTLFYSGTSGIALDLTKDMYPEAFRGKSRLTYYASLFNS
                     IEINSTFYKLPKLSTISKWRESVPANFQFSFKFPKAVTHAKHLNFKENDIELFMDIIN
                     NVGNKKGCVLVQFPPAVKQENIKRLEDMFATIKQTNAGSWKIAVEFRNNHWYNERTFE
                     LLSKYEFSLVFHDLPASKTPFAGGTPNLIYLRFHGTEPRYRGDYDDSILLDYAQRIKQ
                     WLNDGKFVYCYFNNTLGNAYQNLQTLNQFVSSYLK"
     gene            complement(2770..>3498)
                     /locus_tag="VEV83_15065"
     CDS             complement(2770..>3498)
                     /locus_tag="VEV83_15065"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK46496.1"
                     /translation="EQNLGGYLRDVTDPTLTAFVPSNPNGIAVIIAPGGGFHYLVYEL
                     EGTAVAKKLNEKGITAFVLKYRLVHEDPVHPYYNKMMETKNFKMLDSVSAPVIKLALQ
                     DALTAIKYVRQHAAEYKIDSNKIGFMGSSAGGTIAMSVAYNALEESRPNFVAPIYAYG
                     NAIIGSKVPSGRTPIFIACASDDEFGFAVHSVQIYSKWLEANQPVELHMYERGGHGFI
                     MKKQNLPCDTWLERFTDWLSMQYP"
BASE COUNT         1043 a          730 c          639 g         1086 t
ORIGIN      
        1 agatagatca ttgcatatag aatgttctcc cggatttgtt ggttagtaat ccctcgtatc
       61 aaaagcggtg tttttagcca acttccatgt cctaaaaaca tccgtataaa cggtacatac
      121 catttagcta tgtttattcc aaaccctttt ttatatgaag gtatcggata gtcatatcct
      181 tgtgtaatga tggtaatatc gtcaaatttc ggagtgcctc ctcccgctgt taagatgccg
      241 tttatcagaa aataatactg caggtggaaa aacatgagca gagcgtaaaa atcctttgac
      301 agatgtttta ctccttcgtt gaaacgttct tcaaatggga tgaagcgcgt gttggcattt
      361 gcaaccagtt gttgcgccca ctcacaatgt tggaattcgg ccgaatttcc aaccggtgcc
      421 aagattgtag caagtctacg ggcacctacc aaatcattac cacctccact aatcaaaaac
      481 acatctggat gaagtacaga caattcttct acatactctc ttccagtcaa catattcagc
      541 agccaatcgc cacccgcagc gatgctgtaa actgcaagat ctttttccat tccaatacgg
      601 tcaatgatat cggtaagaat taccgggtaa ttaaaccatg aatcaccttc ggctagtaca
      661 accttcttgc ttttatcatt tatatcacgc cacccttttt taattttcct tcgaaactgc
      721 tcattcctgt tttgattttt aattgtgttt aattttctaa gtatgccctc gactgccgaa
      781 agctttaaaa tataggtttc gttcaagtcg tagatgtgct ggattatagt agccaaatca
      841 tcggcgtcta cttcttgccg gagatttctt aagttatcca tagaaatcct gttggcaagc
      901 aaatcgacaa ttaattcggc tttatattcc tgtgtcatcg tcgtggacat tagtgggttt
      961 gacaagaaaa ttcaaacagt caagaattga cagcagttaa tcgtatcaat gctgagttct
     1021 tggcaattag tatccgcgct ttcaatgctg tttgtgtaac tcaggtacaa ttttaaacaa
     1081 tagattctaa aaaagcaata ttgtcatttg ttcattctgt tctcaatttt atggacgagc
     1141 cacgcactta agtttcaaac cgacgcaggt aagcatcttt taaatatgct ggctatatgg
     1201 ctcataactt tatttaacca acaccatttt tcacccaaaa tcattttaca atgaaaaccg
     1261 aactgctctt ccgaaatttc attgtgatgt cgcagttcaa aatcagcaaa gaacttgaaa
     1321 cggacaaatt aaatgctcag ctcaatgaac ttatagccgg tatcgttcga aatcaatcaa
     1381 aacgaacact tgaaaagtta gatgagattg accgtattcg tagcaaaatc gaaagcaagc
     1441 aagcggagct gtctgaaata aaatgtgcgg cttcaggaaa tagaacaaca acttcaaaag
     1501 ttgcttgacg gaataccaga tgtaacgttt cgagtcgata tgacatgcaa acaaaaaaga
     1561 actcctattt gatcaagctc acaaaagaaa atgaaatagc gtactccctt gctaattaat
     1621 ttacttatag atgctcacga gacaatttca aattatcgtt cgattccctc ctgcacaagt
     1681 atgcccgccg tctctcacga agagagtgag agaataatta ttgcaaaaaa cagcttgact
     1741 cgtctcgctt atggtatcat ttcggtcact tcaaatagga gctaacaaac tgatttagtg
     1801 tttgcaaatt ctgataagca ttgccaagcg tattattaaa ataacaataa acaaatttac
     1861 catcattcaa ccactgcttg atgcgttgtg catagtccag taaaatagag tcatcatagt
     1921 cgcctctata tcttggttca gtgccatgaa agcgcaagta tattaagttt ggtgtcccac
     1981 cggcgaaagg tgtttttgaa gcaggtaaat catgaaacac caggctaaat tcgtacttcg
     2041 aaaggagttc aaaagttcgc tcattatacc agtggttatt gcggaactct acagctattt
     2101 tccaggaacc tgcatttgtt tgctttattg ttgcgaacat gtcttctaat cgtttaatat
     2161 tttcctgctt tactgcaggc ggaaattgca ctaacacaca tcctttttta tttccaacat
     2221 tattaataat gtccataaat aattcgatgt cgttctcttt aaagtttaag tgtttcgcat
     2281 gagttactgc tttggggaat ttaaagctga attgaaaatt ggcaggtacg ctctcacgcc
     2341 atttgctgat ggtagacaac ttaggcagtt tatagaacgt gctgttgatc tcgatgctgt
     2401 taaacaaaga agcgtaatat gttaaccggc ttttgcccct gaaggcttcc ggatacatat
     2461 ctttagttag atcaagcgca ataccgctgg ttccactgta gaataacgta tttgataact
     2521 tattcaaaat aacaacaact ttgtgtaggg ctttcacggg ttattatcat cattcactat
     2581 ttttcatctt atataatgct cttaattgcc ctacctattt gctcaagcaa gtattcgcaa
     2641 gtttcaatct ttgacacaag gtgggacaag agggcacgat gtgcccgcac atcgtaatga
     2701 ggtactccaa aattagtgtt tgaataccta ctattattgt ctgatgctat caactgtaca
     2761 tttgttactt tagggatatt gcattgaaag ccaatctgta aatctttcta accatgtatc
     2821 acacggaaga ttttgttttt tcattataaa cccgtgccct cctctttcgt acatgtgcaa
     2881 ttcaacaggc tgattagcct ctaaccattt ggaatagatt tgaacactgt ggacggcaaa
     2941 accgaattcg tcatcactgg cacaggcaat aaagataggt gtcctcccag atgggacttt
     3001 ggaaccgatt atagcatttc cgtaagcata aatgggcgcc acaaaatttg ggcggctctc
     3061 ttccaaagca ttgtaagcga ctgacatcgc aatagtccct ccagcagaag agcccatgaa
     3121 gcctattttg ttagaatcaa ttttgtattc tgctgcatgt tggcggacat acttaatagc
     3181 cgttaatgca tcctgaagtg cgagttttat tacaggtgca ctcaccgaat ccagcatttt
     3241 aaaattcttt gtttccatca ttttgttata gtacggatga acggggtctt cgtgcaccaa
     3301 ccgatatttt aaaacgaagg cagttattcc tttttcattt aatttctttg cgacggcagt
     3361 cccttcaagc tcataaacga ggtaatgaaa accgccgccc ggtgcgataa taacagcaat
     3421 accatttggg tttgaaggaa caaaagccgt taaagtcgga tccgttacat ctcttagata
     3481 acctcccaaa ttttgctc
//
LOCUS       DASQJI010000556         4246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_68526,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000556 DASQJI010000000
VERSION     DASQJI010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68526"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(542..913)
                     /locus_tag="VEV83_15070"
     CDS             complement(542..913)
                     /locus_tag="VEV83_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46497.1"
                     /translation="MNYRRRGRFFVFPLIPIAAALLFGLIVMLLWNSILPHVLNVSAL
                     TYWQAVGLLVLSRILFGSFFRGGPAYGPGSWRGRSMWWSKWQNMSEEDKAKLREQWRT
                     RCGPQRRQEGPTKATGGTERI"
     gene            complement(924..1472)
                     /locus_tag="VEV83_15075"
     CDS             complement(924..1472)
                     /locus_tag="VEV83_15075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK46498.1"
                     /translation="MVEMARQQNNIIQTIKDYGRQLFGFIRSRVNSNEDAEDVLQDVW
                     YQLSAQPSIEEIESMTGWLYRVARNKISDKFRKKKTGLLGDTYDHDLTYLPEIFLADA
                     EDPETRNLQQLFWEELFTALNELPANQREVFILNELEDMTLQEIADLHGEKLKTIISR
                     KRYAVQHLRDRLEGLYFEFMND"
     gene            complement(1572..2315)
                     /locus_tag="VEV83_15080"
     CDS             complement(1572..2315)
                     /locus_tag="VEV83_15080"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HYK46499.1"
                     /translation="MARILIGCSGFHNKDWKEKFYPARLPQSRWFEYYCSKFNTLELN
                     TTFYRFPRVESLKRWYARSPENFVFSVKVPRLITHYKQLKDSARMLNDFYNSVRDGLQ
                     DKLGAVLFQLPSRIIYSEDFLGRVLEAVDENFLNVVEFRHASWWNSRVYSVLGKEKII
                     FCGTSHPDLSDEIVKNNSTIYYRFHGLKKLYFSQYAKKDIDAFANTLAQESSVSTAFI
                     YFNNTATLAAVRNAMQLEKSLLKNKLMRT"
     gene            complement(2360..2557)
                     /locus_tag="VEV83_15085"
     CDS             complement(2360..2557)
                     /locus_tag="VEV83_15085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46500.1"
                     /translation="MTVKPCPPCCTSEFSEINVPDNFFGLTTEEQRNLLSSLLNSHPE
                     WDQTINELIKFLDDGNELLAP"
     gene            2997..>4246
                     /locus_tag="VEV83_15090"
     CDS             2997..>4246
                     /locus_tag="VEV83_15090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HYK46501.1"
                     /translation="MRKIIIICFLTLFTSVLVAQQFYEIDSTSQRWVDSVFASLSPDQ
                     RIAQLMVVRLSEKTADGVAFYADKVEQLVRNYDVGSICLFQGGPVKQANYINYFQHIA
                     QTPLMICIDAETGLGMRMTDSVLKFPDQLTLGAVNDAEIVYEVGKAIGKQCKREGIQV
                     NYAPVVDINNNPNNPVINFRSFGEDKYKVALFGTQIMRGIQENGVMACAKHFPGHGDV
                     AVDSHLDLPVITKSLAALDSLELYPFKALFSEGVGSVMIAHLDIPAIDKTPHLPTSLS
                     KKNVTDLLRTDMGFNGISFTDALEMQGVTKYFGGGEAAVQSLIAGNDMLCLPADVPTA
                     IEKIQSAIADGRLDSVDIDNRVRKVLLAKYNLGLSRLQPVNTNNLFNDLNEDVDELRR
                     KVARNAITLLRLSDSSAFPLKPGK"
BASE COUNT         1149 a          964 c          906 g         1227 t
ORIGIN      
        1 tctgttttgt aaatattcac tgcagctctc tgatgcgact gccagaattg atgcgcgtgt
       61 ctaagcttag cagcgccata cagcgcgcgt gattgattgt gatacatgat gttttcgttt
      121 ttaaatttta taaataatta tttgcggcat ccttcggttt catttgtttt ttagttactc
      181 cttttgataa ttttcgtgcg cactttttcc ataccgttca gcatcatttt tgcgcccacg
      241 gaaaaactgt gacagtttgc tccaggacgg catgctaaaa tatcttccct gccctctgcg
      301 cgctttgtgg gatcctcttt aaaagacgaa tgaaaagaga aattacctta aggatttcag
      361 aaaaaagttg tccgacggag cgcgcagagg ccacaaagaa atcgttgaca ccttccttaa
      421 tgggcttggc gatttgtggg atgtatgctt cagaaaaaag atgtcctgcg gagagaactg
      481 acatcacaaa cgcaattcaa aaatggctcc ttgcgtttga accgtttgtt catcactcat
      541 tctaaattct ctcagtgccc cccgtggcct ttgtgggacc ttcttgtctc cgttgcgggc
      601 cgcacctggt tctccactgc tcacgtaatt ttgctttgtc ctcttcgctc atgttctgcc
      661 atttgctcca ccacatggat ctgccgcgcc aacttcctgg accgtatgcg gggccgcctc
      721 tgaaaaaact tccaaataga attctgctca gcacgagtaa ccccacagcc tgccagtagg
      781 tgagggcaga aacattgagg acatgcggca gaatagaatt ccacagcagc attacgatca
      841 gcccgaaaag taacgcggcc gcgatcggga tcaacgggaa aacaaagaag cggcctctcc
      901 ggcgatagtt catataaaat tttttaatcg ttcatgaatt cgaagtacag cccctcgagc
      961 ctgtcccgca agtgctgtac agcatatcgt ttcctggaaa ttatggtttt caatttttcg
     1021 ccatgcaaat cagcgatctc ctggagggtc atgtcttcaa gttcattcag aataaagact
     1081 tcacgctgat tcgcaggcaa ctcgtttaat gcggtaaata gttcttccca aaataactgt
     1141 tgcaagtttc ttgtctcagg atcttcggca tctgcaagaa agatctcagg caggtaagtc
     1201 agatcgtgat cgtatgtgtc gcccagtaac ccggtttttt tctttctgaa cttatctgaa
     1261 atcttattgc gcgcaacccg gtaaagccac ccggtcatgc tttcgatctc ctcaatcgaa
     1321 ggctgggcac tcagttgata ccagacatcc tgtaacacat cttcagcgtc ttcattagaa
     1381 tttaccctgc tacggataaa cccaaaaagt tgcctcccat agtcttttat agtttgaatg
     1441 atattgtttt gctgcctggc catttcgacc ataagatcgt ttgcatatga agacgatccg
     1501 gccggaaatt tactttaaag cgaaattgaa attgtgtatt tatggtaaac cgcatgcagc
     1561 gcacgtttgt gctaggtccg catcaactta ttcttaagca aacttttctc cagctgcata
     1621 gcattcctca ctgcagcaag cgtagcggtg ttgttgaaat aaatgaatgc agtcgaaaca
     1681 gacgactctt gtgcaagcgt atttgcaaat gcatcgatgt cttttttcgc atattgcgag
     1741 aaatacaatt ttttcagccc atgaaatcga taataaatgg tcgaattatt tttgacgatc
     1801 tcatcggaaa gatccggatg actggtgcca caaaaaataa ttttctcttt tcccaaaact
     1861 gaatacacgc gactattcca ccaactggcg tgcctgaact cgacgacgtt cagaaaattt
     1921 tcgtcaactg cttcgagaac gcggcctaaa aaatcttcgc tgtaaattat tcttgacggc
     1981 aattgaaaca gtaccgcgcc caatttatcc tgtaacccat cgcgtacaga attataaaaa
     2041 tcgtttaaca tgcgtgccga atccttcagt tgtttgtaat gcgttattag ccgcggcact
     2101 tttacagaaa agacaaaatt ctcagggctc ctggcatacc atcgttttaa agactcgacc
     2161 cgggggaaac gataaaaggt ggtgttcaac tcaagcgtgt tgaactttga gcagtaatat
     2221 tcgaaccacc tgctttgcgg caggcgagcc ggataaaatt tttctttcca gtctttatta
     2281 tgaaaacctg agcagccgat caatatgcgc gccatgcttc ttcaaagcaa aaaaggctcc
     2341 attttcgacg gcgcagcggt tatggagcca atagctcatt tccatcgtct aaaaatttta
     2401 tgagctcatt tatcgtttgg tcccattccg gatggctgtt taacaaagaa cttaaaagat
     2461 ttcgttgttc ttcggttgtt aatccaaaaa agttgtcggg cacatttatt tcactgaact
     2521 cagatgtaca acatggcggg caaggtttta cggtcatgcc gatagatttt aaggtgttgt
     2581 gctattgatt ctaaagtacg aacttatttt tattcgtgtg tctcttagcg ccttcgaggc
     2641 ttgccggttc gaaagatcag gaatcgggaa gtactacggc accaagtttc accaagttga
     2701 acattctggg atctttaatt ttaatagttg aacttctttt agatcatcaa gaacatactt
     2761 ccggttttag cgaatcagtt tgaaccacat agaacatggg agacatagca agcacataga
     2821 acttgtaaaa ccctatgtgt ctatgtggtt caattcccaa ataataattt ttgtataaat
     2881 caacgtgaga cactttccgg ttttaagatt atctaatgat ttggattttt acttttatat
     2941 tcagcgcaaa atttaagtct cataaaataa cagatcgtct gccgtacatg caagccttga
     3001 gaaaaataat tatcatttgt ttccttaccc tgtttacctc cgttttagtc gcccagcaat
     3061 tttatgaaat cgactccact tctcaacgat gggttgacag tgtttttgct tctctttcgc
     3121 ccgatcaacg aattgcgcaa ttaatggtcg tacggttgag cgaaaaaact gctgatggcg
     3181 ttgcctttta tgccgacaaa gttgagcaac tggtcaggaa ttatgacgtt ggatccattt
     3241 gtcttttcca gggtgggccg gtgaagcagg caaactatat aaattacttt caacacatcg
     3301 cgcaaacacc tctaatgata tgtatcgacg cggagaccgg gttgggcatg cgcatgacag
     3361 atagtgtttt aaaatttcct gaccagctta cactcggcgc ggtgaatgac gcggaaattg
     3421 tatacgaagt tgggaaggcg atcggcaaac aatgcaaacg cgaaggtata caagtgaatt
     3481 atgctcccgt tgtcgatatc aataacaacc caaataatcc tgtcataaat tttcgctcgt
     3541 ttggtgaaga caaatacaag gtcgcgttat ttggcacgca gatcatgcgc ggcatccagg
     3601 aaaatggtgt catggcgtgc gcgaaacatt ttccgggcca tggcgatgtg gctgttgact
     3661 cgcacctcga tctcccggtt ataacaaagt cgcttgctgc cctcgactcg cttgaattat
     3721 atccatttaa agctcttttt agtgaaggcg taggcagcgt gatgatcgca catctcgata
     3781 ttcctgcaat cgataaaaca cctcacttac caacctcgct gtcgaaaaaa aatgttacag
     3841 accttttacg gacagacatg ggatttaatg gcatctcgtt tacagacgca ctcgaaatgc
     3901 agggtgtcac aaaatatttt ggcggaggtg aggccgctgt acaatcgctc attgccggga
     3961 acgacatgct ttgcctccct gccgatgtgc cgacggccat cgaaaaaatt caatcagcca
     4021 tcgcagacgg ccggcttgat tccgtggata tcgataaccg tgtgagaaag gtcttgcttg
     4081 caaaatataa tttagggctc agcagactgc agccggttaa tacgaataat ctctttaacg
     4141 atctgaatga agatgtagac gaactgcggc gcaaagtggc acgaaacgcg atcacgcttt
     4201 tgcgcctttc ggattcgtcg gcatttccgc tgaagccagg aaaaaa
//
LOCUS       DASQJI010000557         3279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_837874,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000557 DASQJI010000000
VERSION     DASQJI010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837874"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1629
                     /locus_tag="VEV83_15095"
     CDS             <1..1629
                     /locus_tag="VEV83_15095"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HYK46502.1"
                     /translation="ARSAYKQIEFLLEYYYPYLVRTVNGPALPFADGENSLAVLPPQG
                     FQVIEEMLFPVYDKNNSAQLLHQAALLKQMLLDIKDQKDPYGFQDKYVWDAMRLEIYR
                     LIGLGISGFDSQLAENSVPEAAAVITSLKHILHFYSGDIHDSALVRKLNDKIASALKC
                     LDAHKNFNDFDRLTFIRAYGNPLSEMLALCTEKLNYNLPSERRLLSPSAPNLFAYSFY
                     DPSVYSPNEEANATADKILLGKKLFFDNILSANNERSCASCHQPSKAFTDGLAKSLTL
                     NDKDVVTRNAPTLLNAAFQPKQFFDSRAVFMEQQVFEVVHNPKEMGGSLASAVTRIQK
                     DSSYLNLFHKAYAYTTPTISEENITNAIASYLRCLISLHSRFDAYMHGDNNALNKDEV
                     KGFNLFMGKAKCGTCHFVPFFNGVAPPYFSESESEVIGVPSTNDTLHPALDPDQGKYN
                     LYPIDILRFSFKTPTLRNVALTAPYMHNGVYKSLEEVLDFYNKGGGAGLGIAPPNQTL
                     PKSRLQLSAVEKKQIISFLRALSDTSVIKDARIH"
     gene            complement(1762..>3279)
                     /locus_tag="VEV83_15100"
     CDS             complement(1762..>3279)
                     /locus_tag="VEV83_15100"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYK46503.1"
                     /translation="TTQNFFLTAPPVATARKIRIVAYGDCGNNSSNQVNVKNAYRTYV
                     GNNATDLWLLLGDNAYNAGLDAEYQSNFFNVYKADLLKNIMLFPTPGNHDYANDATRQ
                     DDHNIPYLANFTLPKNGECGGVASGKEEYYSFDYGDIHFICLDSYGEENNKRFYDTTS
                     AQILWLKSDLAANQRKWTIVFWHHPPYTMGSHNSDTESELVSVRMNLNRILERFGVDL
                     VLNGHSHDYERSYLINDHFGLENTFSFATNAVSNSSAKYDGTANSCPYLTTSAKVKHG
                     TVYVVAGSAGQLGGTQASFPHAAMYYSNATTGGSLVLEVQGNRLDAKFVAADNTIKDQ
                     FTIEKDVNKTSSVSLTAGQSTDLVASWIGNYSWSTGATTQSITISPAAGNYDYFVNDN
                     ANAASRCLADTFHVTVLPAGGFATLSNTTSSGVSLKVYPNPAYNSNVQLSISSSIKQQ
                     VTYIIKDVSGRMISSQKITVNKGVTDRSIHLATGVYFIDAIDEHGERSTQKLIVK"
BASE COUNT          897 a          739 c          707 g          936 t
ORIGIN      
        1 gcaaggtcag cgtataagca aatcgaattt ttactggagt attattaccc ttacctcgtg
       61 cgtaccgtaa acggacctgc acttcctttc gcagacggcg aaaattcgct cgccgtatta
      121 cctccgcagg gcttccaggt gatcgaggag atgttgtttc cggtgtatga taaaaataac
      181 tcagcgcaat tgctgcacca ggcagcgttg ctaaaacaaa tgctcctgga cataaaagat
      241 caaaaagatc cttacggatt ccaggataaa tatgtatggg acgcgatgcg tttggaaata
      301 taccggctca ttggcttagg catcagtggt tttgattcac aattggcgga aaattctgtc
      361 ccggaagctg cagcagttat aacttcttta aaacacatct tacattttta ttcaggcgac
      421 atacatgatt cagcgcttgt acgtaagctc aatgacaaga tcgcgagtgc tctcaaatgt
      481 ttagatgcac acaaaaactt taatgatttc gacaggctca cgtttattcg cgcttatgga
      541 aatcctcttt ctgaaatgtt agctctgtgc acagaaaaat taaattataa tttaccatct
      601 gaaagaagat tgctttcacc atctgctcct aacctttttg catattcctt ttacgatccc
      661 agtgtgtatt ctccgaatga agaagcaaac gcaacagcgg ataaaatatt actcggcaaa
      721 aaattattct ttgataacat tctctctgca aacaatgaac gctcgtgtgc aagctgtcat
      781 cagccttcaa aggcttttac tgacggactt gcaaaaagtt taacgttaaa cgataaggat
      841 gtggttacac gaaatgctcc cacgctgttg aatgccgcct ttcagccgaa acagtttttc
      901 gacagccgtg ccgtattcat ggagcagcag gtatttgaag tagtgcataa tccaaaagaa
      961 atgggaggct cactcgcatc tgcggtgacg cgcatacaaa aagacagttc ttatctcaat
     1021 ttatttcaca aggcgtatgc gtatacaacg ccgacaataa gcgaagaaaa tattacgaat
     1081 gcaatcgcct cgtacctgcg gtgtttgata agtttacatt cccggttcga tgcttacatg
     1141 catggggaca acaacgcatt aaataaggac gaagtaaaag gctttaattt atttatgggt
     1201 aaagcgaaat gcggtacctg ccatttcgtt ccgtttttta atggcgtcgc accaccttat
     1261 ttcagcgagt ccgaatcgga agttatcggc gttccttcca ctaatgatac tttgcatccg
     1321 gcacttgatc ctgaccaagg caaatacaat ttgtacccga tcgacatcct gcgtttttcg
     1381 ttcaagacac cgacactgcg aaatgttgca ttaaccgcgc cctacatgca taacggcgtt
     1441 tataagtcat tggaggaggt actcgatttt tataacaaag gaggaggtgc gggactcggc
     1501 attgcgccac cgaatcaaac attgcctaag tcgcgtttgc agttatctgc ggtcgaaaaa
     1561 aaacaaataa tatctttttt gcgggcgtta tctgatacaa gtgtgataaa agacgcgcga
     1621 attcattgaa atcggatcga caccacgtct tcaaattgtt tagagcacaa aggtcgcgac
     1681 taaccacaac gaccactaag cccttaaatt tacatcgtgt tctttgtgtt ttctttgtgt
     1741 tcgttgtgct ccacacctaa gttacttcac aattaatttt tgcgtactgc gttcgccgtg
     1801 ctcgtcgatc gcatctataa agtacacgcc ggtggctaag tgaatacttc gatccgtaac
     1861 gcctttgttc accgtgatct tctgtgagct tatcatgcgc cctgaaacat ctttaattat
     1921 ataagtgacc tgttgcttaa tactactgct aattgacaat tgaacattgc tattgtacgc
     1981 agggttagga taaactttta gcgacacgcc ggatgatgtt gtgttgctca aggttgcaaa
     2041 gcccccggca ggcaggacgg tcacgtgaaa tgtgtcggcc aggcacctgc tcgccgcatt
     2101 cgcattatca tttacaaaat aatcatagtt acctgcagcc ggtgagatcg tgatagactg
     2161 cgtggtagcg ccggtgctcc agctataatt accaatccac gatgcaacca ggtctgttga
     2221 ttggcccgcg gttaaagaaa cagaacttgt tttatttacg tctttttcta tcgtgaactg
     2281 gtctttgatc gtgttgtctg ccgcaacaaa ctttgcgtcc aggcgattac cctgcacttc
     2341 cagcaccagt gaaccaccgg tagttgcgtt gctgtaatac atagccgcat gcggaaaact
     2401 tgcctgtgtt ccaccgagct gtccggcaga tccggcaact acatagacag taccgtgttt
     2461 tactttagca gacgtcgtca gatacggaca agaattcgca gtaccatcat atttagcact
     2521 tgaattactg acggcattgg tcgcaaacga aaaagtattt tccaatccga aatgatcgtt
     2581 gataagatac gatctttcat aatcgtggct gtggccatta aggaccaggt ccacgccaaa
     2641 cctttcaaga atacggttca aattcatcct cacagaaacg agctctgatt ctgtatcaga
     2701 attatggcta cccattgtat aaggcggatg gtgccagaac acaatggtcc atttgcgctg
     2761 gttcgcggca agatcactct taagccacag gatctgcgcg cttgtagtat cataaaatcg
     2821 tttgttattt tcttccccgt aagaatcgag acaaatgaaa tgaatatcgc cgtaatcaaa
     2881 agaataatat tcttctttac cgcttgcgac gccgccgcat tcaccattct tgggtaaagt
     2941 aaagtttgcg agataaggta tgttatggtc gtcctgcctt gttgcatcat ttgcatagtc
     3001 atgattgccg ggagtcggga acagcataat gttcttcaat aggtctgcct tataaacatt
     3061 aaaaaagttc gactggtatt cagcgtcaag gcccgcatta tatgcgttat cgccgagtag
     3121 caaccaaagg tccgttgcat tgtttccgac gtaagtgcgg tacgcattct ttacgttgac
     3181 ctggttggaa gaattgttgc cgcaatcgcc gtatgctact attcttattt ttcttgcggt
     3241 agcaacgggc ggtgcggtca gaaaaaagtt ttgtgttgt
//
LOCUS       DASQJI010000558         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2373327,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000558 DASQJI010000000
VERSION     DASQJI010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2373327"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VEV83_15105"
     CDS             <1..352
                     /locus_tag="VEV83_15105"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK46504.1"
                     /translation="GTTMFKEKFVVKVRNNWIPVSTKDIACFVRENLNYIFTFSGEKY
                     IADFVTLEEIEELLDPKLFFRTNRQSIVHIDSIQSVKLHENQKLTLMVKPPLKMELDV
                     SRDKAPAFKKWFER"
     gene            614..1204
                     /locus_tag="VEV83_15110"
     CDS             614..1204
                     /locus_tag="VEV83_15110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46505.1"
                     /translation="MHFETSELYHLYNHGNDGQRIFFSGENYRYFMRCYNKFVTPFAD
                     TIAYCLMPNHFHFLIYTNDRSIENVRIGSLTLTKLSNAIRQLLSTYASAINKQEGKSG
                     SLFRQKTKAKLLERSSENYPLIAFHYTHQNPLLAGLAEKLEDWEFSSYRDYAGRRDGS
                     LCNVILAKKLINVNWSHFERESLELYENKKILASIF"
BASE COUNT          465 a          326 c          311 g          417 t
ORIGIN      
        1 cggcacaaca atgtttaagg aaaagtttgt agtgaaagtg agaaacaatt ggatcccggt
       61 ctcgacgaaa gatatcgctt gttttgtaag agaaaatctc aattatattt ttacgttcag
      121 cggcgaaaaa tatattgccg attttgtcac actggaggaa attgaggaac tactcgaccc
      181 gaaacttttt tttcgcacta accgccaatc tatcgtacac atcgattcga tccaaagcgt
      241 gaagctgcat gaaaaccaaa agctaacact aatggtaaaa ccaccattga agatggagct
      301 cgatgtaagt cgggataaag ccccggcatt taagaagtgg tttgagcgtt agaggtttga
      361 ataacggtca gacgctttaa aagcgtcaga ccgttatcat gaatggtttt aatgaagccg
      421 tccaaatgtg aagtatcggt ctaacgacga agccatcaga catatcgcgt cattcggcat
      481 ctttgatcgt cacgcccttt cggtgcctca ggcttcggtc agacgcttag aaagcgttca
      541 gaccgctacg aggaataaac gaaaaacata atcaggagaa taacatacga taatatttct
      601 taaacgcctt gttatgcatt ttgaaaccag cgaactctat catctatata accacggaaa
      661 tgacgggcaa aggatattct tctctggaga aaattatcga tactttatga gatgctataa
      721 taaatttgtt actccgtttg cagacacaat tgcgtattgt ttaatgccta atcattttca
      781 ttttctgatc tacacgaacg atcgatctat tgaaaatgtt cggataggga gtttaacttt
      841 aacgaaatta tctaatgcaa ttagacaact gctcagcact tatgcttctg cgataaacaa
      901 acaggagggg aagtccggct ctttattcag acagaaaacc aaagccaagc tgcttgagag
      961 atcttcagaa aattatccgc ttatcgcttt tcattatact catcagaatc ccttgcttgc
     1021 aggccttgca gaaaaattag aagactggga gttttcatct tatcgcgatt atgcaggaag
     1081 gagagacggc agtttatgta acgtaatcct ggcgaagaaa ttaatcaatg taaattggtc
     1141 acattttgaa cgggaaagcc ttgaactgta tgagaataaa aaaattctag catcgatatt
     1201 ctaatatcgg tctgacggcg cgaagccgtc tgaccggcaa acgtgcctgg tttgaggttt
     1261 gatcttgctg ctcgcgccga gctgccgaaa attcctctcc ttacttgtct cgttccttca
     1321 gcgcgctcaa gcgacgggag aagaaatcct aaaccccaca tctcaaatcc tatctcactc
     1381 actcatatcc aggaagaacg catcgctctc aagatcgggt gaataaccaa taattgcact
     1441 ccagtcgtta gcagccacct gtacacctat tttcaaagcc ttgccggtta agcctcttat
     1501 cttgctgcgc ttaattgca
//
LOCUS       DASQJI010000559        20240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1143519,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000559 DASQJI010000000
VERSION     DASQJI010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 20240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20240
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143519"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VEV83_15115"
     CDS             complement(<1..254)
                     /locus_tag="VEV83_15115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46506.1"
                     /translation="MKKLMILAFIIPAISSFSQDFTTDMASAKTAYSSGKLEDAHFAL
                     LQAMQEIDLIIGKEVLKLMPQKMDTNTVNTSDDNVTSNVG"
     gene            complement(273..1037)
                     /locus_tag="VEV83_15120"
     CDS             complement(273..1037)
                     /locus_tag="VEV83_15120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46507.1"
                     /translation="MKKIAVTGLCVCSLSFSSHAQLLKKLKDKVNDAMTDKTSQSTTQ
                     GTQTSTNSNSSGSPTNKTGGGLTNTTPPDVNQQIADAEKSHASGNYSDARYSLQQALM
                     SIEVQIGREILQSLPATVSGLQKDTLQNKVMSTAWGWNNLTIQSVYKKGDQQMTVTIG
                     NNTFYSGFVAMYFNNAGYMQTNSNGKDENVKQTKVKSYRALITYDDSKGYALMVQLGQ
                     ASLIVWECVNFATEQDVMNAANAFDIDGIKKMLGEQ"
     gene            complement(1114..1872)
                     /locus_tag="VEV83_15125"
     CDS             complement(1114..1872)
                     /locus_tag="VEV83_15125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK46508.1"
                     /translation="MSKTILITGATSGFGQAMAEKFASEKWDCIITGRRKEKLEVLAN
                     DLAAKHNVSVLPLVFDVRNRAEVFNVLDHRDEHWKHVDLLVNNAGLAAGRDLFDEALI
                     EDWDTMIDTNVKGLLYVSKAVIPEMIANGKGHIINIGSTAAKEVYKEGNVYCASKHAV
                     AAISEAQRIDLLRHKIKVTAIHPGAAETEFSLVRFKGDTEKAKAVYEGYQPLTAGDIA
                     NTIYYCATLPDHVCINDLVITCTAQANSFYTYKE"
     gene            1969..2778
                     /locus_tag="VEV83_15130"
     CDS             1969..2778
                     /locus_tag="VEV83_15130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46509.1"
                     /translation="MKRIRLLLLLFFLSSVTANTALCQKLFLHVSKLSDTKVKVEWRN
                     PYGDSIVQLNVQKSWDSVRNFRTVFVPLSPELPQNGYVEESYGFPGMFYRIFYVLSDG
                     TFFFSQAKRATTGSDLTDELSEAHKADTNFVVTVHDEDSVIAELTYAGYKRFKDSIVN
                     YTKDTLYSLTDADVLIHYYNINIHWVPSTHIFTNTDGYVEIFLADAPDKNYRLRIFDE
                     GHKPVFNIQHIGEAQLLLDKTNFVHSGWFYFELFESDKLRERNKFYVPKDF"
     gene            2931..4736
                     /locus_tag="VEV83_15135"
     CDS             2931..4736
                     /locus_tag="VEV83_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYK46510.1"
                     /translation="MSHPLFRTKNINKILRDAETMAEDPHAGAGLKRVLTLRDLTFFG
                     IAAILGAGSFSSLGGAVFHGGPGVVILFVITAIACAFTAFCYSEFASRIPVAGSAYTY
                     AYASFGELFAWIIGWALIMEYSIGNIYVAYSWSDYFTSFLNKLGVHLPEYLSTSYMEV
                     RHLLESGNTSPQVLDAWNNSPVIGGLHIIFDLPALIINLLITILVYRGIKESRNVSNI
                     MVVLKLVVVLMVILVGGYLVFSNGLTANWHPENNAGIHSFMPNGFKGVMAAVSGVFFA
                     YIGFDAVSVLAEESKNPQRDLPRGMILSLVICTTVYILLTLVLTGAVNYRNFNDVGDP
                     LAFVFEEKNLNVGWMQFFVAIAAVIAMTSVLLVFQMGQPRIWMTMSRDGLLPPVFERI
                     HKKYKTPSFATIITGVVVGVPILFTDKTFVLDFTSIATLFAFVLVCGGVLLIPRREKE
                     AGKFHIPYINGRIIFPALVVASLLIAYLVNHQYFHELFTFSLTPDEIVSVKAGLKDAT
                     PQVIQNNVHAALVAKETLNVSTIIFWLVSLIIAVVAFKKQYSLIPLLGLITCLYLLTG
                     MTAKNWAWFASWLVLGLIFYFSYGYRKSKLFEPAV"
     gene            complement(4700..5542)
                     /locus_tag="VEV83_15140"
     CDS             complement(4700..5542)
                     /locus_tag="VEV83_15140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46511.1"
                     /translation="MIQGARRNIIIQYSIIFYLLMIYKWLNGMFLYQFRPAFFFTRDD
                     MFTWLFMRTGIHRWLLNNNAGCILFDVLFYSAPLFLLATVNRKRWSWAAAFWMLVVNW
                     TYVQCYTLYPTTSIEGHVPWLLFPFVFLFLNEKTFSLLVEALRYFFLFIMASAGLWKF
                     LQGGIFHLDEMSGVLLEQHKDLITNSPGFWQTSLILYLINHQTISYLLYALACVVELS
                     FVVGFFTKKYDRYLLLAFVIFLVMDYLIMRIAYFEWLPFVIVLNVRLLKASQTAGSNN
                     LLFR"
     gene            complement(5539..6036)
                     /locus_tag="VEV83_15145"
     CDS             complement(5539..6036)
                     /locus_tag="VEV83_15145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46512.1"
                     /translation="MKRLWRHNKFLFGLLVLFAAFQILNNIRQDVAFSPTYTYGMYSQ
                     VIRPQKKYIVPEIIVNGRVLQTKNFTPQQWDKIKQPIVLFQKQDEWNRAEFNIYIGRL
                     LHIEDSGYYVNELSQAAFNEWYQKYLSAIIDANISSLSLQFQEYDLRGPKPVKLQTRE
                     RITIQ"
     gene            6116..10747
                     /locus_tag="VEV83_15150"
     CDS             6116..10747
                     /locus_tag="VEV83_15150"
                     /inference="COORDINATES: protein motif:HMM:NF013524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C25 family cysteine peptidase"
                     /protein_id="HYK46513.1"
                     /translation="MLRKILLPCLLIIISLRLAAQPYHNEWIDYSKTYYKFKVQWYDA
                     NQAGDRLQHKVIRINQPALAAAGLGGVPAEQFQLWHNGEQVAIYTSKQSGTFGSGDFI
                     EFWGEMANGKLDKELYKDPNWQLSDAWCLSSDSAAYFLTVNSSGSNLRLVPTANNVQN
                     AGSAEKNFTYTVGKYFRVDLSQGYFITEEGLPLMLSSFDEGEGYSSHEINSYLQPFAP
                     LFADTVGTSVTLRVNMLGYRFNSRNVKMFLNGDSVGQVSMPFFASAKSVITGIPASKL
                     IHDSANIRIQDVSFPGDVIRLAQIEFSYQRKFNFGNDSSFEFYVKGSGNGRYLKIVNF
                     NAGTGGAPILYDLTNNKRYVANTDVADTLRFLLDPSFPQYHLLLVRANGSTAKNVTSF
                     ESKTYTDYSQAANQGDYLIISNARIYGSGSTNYVEQYRAYRNSAAGGSYNAKLFNISD
                     LEDQFAWGEKMHPLAIKNFLRYARNTFQTPPAYAFLIGKGVAYAQYLLDFQNGYLDQL
                     NLVPTFGNPGSDNLLGSDGFSDVPATPIGRLSAVTANEVGVYLSKVKEYELAQANKSD
                     SIENKSWLKTVLQLTGANDEPSLGIQLDSFMRSYKNIISDTLFGANVFDYSKTANPEG
                     YAAGVLDFTNRYNHGSAVVTYFGHSSNSSLDFNLEDPGKYSNTGRYPFFLVNGCVAGN
                     VFDWDQYGTRFSFLSSLSEKYVLAPSKGSIAFLSTSSFGIVSYLDVFTRAFYKAMSVS
                     EYHNGIGDIVQSGSAAGLAFLSNDFYGRMHAQQYTLHGDPAIRLNGFAKPDYAVQTNS
                     INIDPAFISAANDSFTVKVKIYNLGRAVSDSVHFVLLRYNSNTDSSIVFSRRLPYIEA
                     IDSLLITLPVIPNQDTGTTKYAAYIDDNHKISELSENNNLAYFKISIADNDLRPVYPY
                     NYAIVNHNKISLAASTADPFAQSKKYRLELDTTSLFNSAAKLKMITTSKGGLIEFNGV
                     NLSLNNVVYYWRVAQAGKNPHWNNFSFIYKQDSMPGFEQAHFYQHTESDLDGLRLDTG
                     SRSIQFAPRVASLFAKQTVYKQFEQDNDFSVSADGSLIGWSACVGSSILFNVLDQKTF
                     SVFANTTHPYGAAGGCKPITENNFEFSTQTATSRKNAMDFLDNYVPDGSYVVVRKIYD
                     IGNADWAPTVWAKDTALYGHNNSLYHRFKDQGLSIDSFIFPRTFIFIYKKNDSAHYSP
                     VSVFSKGIYDHITASAIVSVYDTAGTATSPLFGPSKAWKMMTWEGSQVNHNNTTSFDV
                     LGIDNNGNDSLFFTLNKTRKQQDISTINAKKYRNIKLRMHTQDTTTDIPLQLSDWLVS
                     YTPVPEGAVAPNIGVHIPATVTYDHAVNVQYDTLAGYVIFKNISNAGFTMLKVDLSLT
                     GPDGVVHDFHLPRTRSLPAGDTVKVSYRVNVTALPAGRYNLRLEVNPDNDQPEQYHFN
                     NTLYKYIDIVRTAVPQSQVAAAAKASEADVTGVTVFPNPFKEKINIVSNEKGVSIAKV
                     FTVTGQLLLQRNFSGTTQLNIPNLSEGIYLVEITSSSGKQVFKLKKQND"
     gene            complement(10744..11400)
                     /locus_tag="VEV83_15155"
     CDS             complement(10744..11400)
                     /locus_tag="VEV83_15155"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HYK46514.1"
                     /translation="MISEVLPVLFAGFSVSFLGQLPLGNLNVAATQIGVEENFKNAWL
                     FSIAGAIVEVVYLRLALNSSEWMMHNKMLFNTISWFTVVLFYTLGFLSVRKAVLQKEP
                     QKKGLLIDNNVNRFVLGFMLSIVNPMQIPFWFFWGTYFIHNGTVKPIAADFNMFTIGA
                     CVGTLCGQAIYIHGGNWLIKKLHASHRILNIIMGAVFIISASIQVYKIFFESWANKKF
                     "
     gene            complement(11411..12451)
                     /locus_tag="VEV83_15160"
     CDS             complement(11411..12451)
                     /locus_tag="VEV83_15160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46515.1"
                     /translation="MKRIFNWERLPFFVIYAPFIFLWFYYWMVSRRFWFFSNVNPTMY
                     FSGFEGETKQEMFTQLPAQFCPIGIYIEPGQAFETVLCQIKKAGLKFPFAVKPDVGTK
                     GLLFRKIENEEQLRRYHALLPSTYMVQELITLPLELSVFHVRYPDEQNGMITGMIAKE
                     YLHVKGDGVSTLRKLIESHPKAFMIEGEQKHKHKERLDEIIPENEIYFLNELGNHNRG
                     ATFLNLQHEVDDKMLRVFDEISLYSKHFYYGRYDIKTTSIEDLKAGKNISILEFNGVG
                     SEPNHIYDIGLSYMQALRIVARHWKYMYEIGRINYKKGIPYIPFWKGIRMATDSQKNV
                     KRMKQLDLECDI"
     gene            12588..13367
                     /locus_tag="VEV83_15165"
     CDS             12588..13367
                     /locus_tag="VEV83_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HYK46516.1"
                     /translation="MHIPRMADMMANGESPEILFWVGCAGSFDQRAQRITKAFASILD
                     KIGIKYAILGKEEACTGDPARRSGNEFLFQMMAYNNIQILNGYGIKKIVTTCPHCFNI
                     LKNEYPELGGNYDVIHHTTFLQQLIDDGKLKFEGGRNFKGKRITYHDSCYLGRANGIY
                     EAPRKLLELLDAELVEMKRCRTKGLCCGAGGAQMWKEEEKGSTRINFERTEEAINTGS
                     NIIASACPYCNTMLTDGIKNKEKEDVVKVMDIAELIAADIE"
     gene            13435..13947
                     /locus_tag="VEV83_15170"
     CDS             13435..13947
                     /locus_tag="VEV83_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46517.1"
                     /translation="MDFSYKHLLPQDFGDNSRVWIYQADRPFNNSETFGIGKALNDFV
                     VNWKSHGVPVKGYANIFFDQFIILMADEEATGVSGCSIDSSVHVIQEIGSKFSVDLLN
                     WQSLAFVVDDKVQIISRQQFNDALDQSLITPRTLFFNNVVTTKRDLEEKWIIPVNESW
                     LKTKIKQTVS"
     gene            14050..14125
                     /locus_tag="VEV83_15175"
     tRNA            14050..14125
                     /locus_tag="VEV83_15175"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14083..14085,aa:Gly,seq:ccc)
     gene            14281..15699
                     /gene="miaB"
                     /locus_tag="VEV83_15180"
     CDS             14281..15699
                     /gene="miaB"
                     /locus_tag="VEV83_15180"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HYK46518.1"
                     /translation="MIDLVGNKVHDETRQGEPFAPFADEANDYGKTFYIESYGCQMNF
                     SDSEIVASILQQQGFGATRDAASADLILLNTCSIREKAEQTVRRRLTEFRKIKQSKPG
                     LLVGVLGCMAERLKSKLLEEEKLVDIVVGPDAYRSLPALIEEAESGQKAVNVLLSRDE
                     TYADISPVRLDSNGVTAFISIMRGCNNMCSFCVVPFTRGRERSRDAYSIVREARRLFE
                     QGFREVTLLGQNVDSYYWVDEEKDEIITFARLLQKVASIDPLLRIRFSTSHPKDITDE
                     VLHTMVKYENICKYIHLPVQSGSSRILQLMNRTYTREWYMAKVKRIREVIPDCGISSD
                     IIAGFCTETENDHLETLDVMQQSMYDMSYMFFYSERPGTLAARRYTDDISEEVKKRRL
                     KDIVELQNKLSYESNRLDVGKTFKVLIEGNSKKSESEWRGRNTQNKVIVFPKANFNYK
                     KGDYVMVKVNDFTQATLIGDVV"
     gene            15761..17038
                     /locus_tag="VEV83_15185"
     CDS             15761..17038
                     /locus_tag="VEV83_15185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK46519.1"
                     /translation="MTDIQSIKNRFGIIGNSPALNYALQVASQVSGTDLSVLIVGESG
                     VGKEAFSQIIHALSARKHNPFIAVNCGAIPEGTIDSELFGHEKGSFTGAVESRKGYFE
                     TVNGGTIFLDEIGEMPLGTQARLLRVLETGEFIRVGSSKVQKTDVRVIAATNKDLYQS
                     THNGKFREDLYYRLSTVPIRVPALKDRKEDIILLFRKFVVDFAERYKTTPVQLEDEAK
                     NLLINYPWPGNVRELKNIAEQLSVLSKQNVVTAMELQHFLPEKIVNRLPVLAVSHQGN
                     GDFANEREILYKLFFDMKKDVTELKKMFLEILKNPALANNAANFTSESLQNDYLLNGE
                     TNYNTAVLSPVGQPAILPGASQGNQPVILPHKDEIHHHEEVEESLNIMDKEKELIIKA
                     LKKHRGKRKDAALDLGISERTLYRKLKEYDINE"
     gene            17031..17579
                     /gene="lptE"
                     /locus_tag="VEV83_15190"
     CDS             17031..17579
                     /gene="lptE"
                     /locus_tag="VEV83_15190"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HYK46520.1"
                     /translation="MNKKSDLSIVTCRWSVKYVSAIFAPLLILLFTSCGPYTFRDVSV
                     DYSKIKTVKVGFIDNKARYVNPQLSPRLTDNLKQKINNYTKLTQVTGDDANYQINGVI
                     SRYDVSTSAISSNQSATNRLTVAANITFYNAVDNKTDNFAVSRDFDFSANLSLQQAEG
                     QLLDDVINQLTDQIFNHIFSNW"
     gene            17610..18398
                     /locus_tag="VEV83_15195"
     CDS             17610..18398
                     /locus_tag="VEV83_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46521.1"
                     /translation="MLSSSENILKSLTGKSSFHEVTAAELQELAEQYPYFGVAQYLLA
                     KKLFFENNDEYKHVIQRAALHFSNPAWLNFNFTDEHQTEDVITTQASSFLETHLKEDN
                     EEPAEEYADVDAGTSEKLSSILKEHVAAFEKPVEHESALNIESTPYHRVDYFDSQGIK
                     LDSEKETDKLGVQLKRFTDWLKQMKRVSSNPSDLGTDQKAESEVQNLAEHSNDREEVV
                     TEAMAEVLAKQGKPEQAIRIYEKLSFLNPSKSAYFAAKIGDLKA"
     gene            18401..18751
                     /gene="secG"
                     /locus_tag="VEV83_15200"
     CDS             18401..18751
                     /gene="secG"
                     /locus_tag="VEV83_15200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HYK46522.1"
                     /translation="MTFLIFILITIVCVILGLIVLIQNPKGGGLSGTLAGFNNQFMGV
                     KQTTDVLEKGTWLFVSILGALCILSVAFLSGAGGASNNSLQDINTSTVPTQQAPNNTQ
                     QQAQPNTFQLDTTK"
     gene            18777..18850
                     /locus_tag="VEV83_15205"
     tRNA            18777..18850
                     /locus_tag="VEV83_15205"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18809..18811,aa:Gln,seq:ttg)
     gene            complement(19765..20073)
                     /locus_tag="VEV83_15210"
     CDS             complement(19765..20073)
                     /locus_tag="VEV83_15210"
                     /inference="COORDINATES: protein motif:HMM:NF020382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhR family protein"
                     /protein_id="HYK46523.1"
                     /translation="MHAQLITYQLNNISQAEYLKQMVEPDAPILANVKGLISKVWLTD
                     DEKNTFGGFYLWENKTAMDDFMHSDLVKAVVSRPYVKNVSSVDWEVNQTASLITRGLK
                     "
BASE COUNT         5760 a         4295 c         4510 g         5675 t
ORIGIN      
        1 aagccaacat ttgatgttac attatcgtca cttgtgttaa cagtattagt gtccattttt
       61 tgcggcataa gcttgagtac ttccttgcca atgataagat cgatctcctg catcgcctgc
      121 aataaggcaa agtgcgcgtc ctcaagtttg ccagatgagt acgccgtttt tgcggaggcc
      181 atgtcggttg taaaatcctg agagaaagaa ctgatcgcag gtattataaa agcgaggatc
      241 attaattttt tcatgactaa gttttttaag cgttattgtt ctcctagcat ttttttgatt
      301 ccatctatgt cgaaagcgtt cgcggcgttc ataacgtcct gctcggtggc aaaatttacg
      361 cactcccaaa cgatcagcga tgcctggccc agttgcacca ttaatgcata ccctttgctg
      421 tcatcataag ttatcagcgc acggtacgat tttactttcg tttgctttac gttctcgtct
      481 ttgccattgc tattagtttg catgtatccc gcgttattga aatacatcgc aacaaagcct
      541 gaatagaaag tattgttccc gatcgtcaca gtcatttgct ggtcgccttt tttatagacg
      601 ctttggatgg taagattgtt ccaaccccat gcggtactca tcactttgtt ttgaagtgta
      661 tctttttgta aaccgcttac ggttgccgga agagattgca gtatttccct gccgatctga
      721 acctcgatgc tcattaaggc ctgttgtaaa gaatagcgcg catcgctgta gtttcccgac
      781 gcatgcgatt tttcggcgtc tgcgatttgc tggttcacat ctggcggtgt cgtgtttgta
      841 agtccgccgc ctgtcttatt cgtcggcgat ccggaactgt tgctattggt actcgtttga
      901 gttccctgcg tggtgctctg cgatgttttg tcagtcatcg cgtcgttcac tttgtccttt
      961 agttttttaa gaagttgagc gtggctgcta aagcttaacg aacacacaca caatccggtt
     1021 acggcaattt ttttcatgag tagcatcatc gtttgattta ggaaacgaaa ataataaaat
     1081 tgtgggttga gcgggtaaaa aatggattcg aaattattcc ttgtacgtat agaaggaatt
     1141 ggcctgtgcg gtgcaagtga tcacgagatc attgatgcaa acatggtcag gaagcgttgc
     1201 acaataatat atggtattgg cgatgtctcc agcggttaaa ggctgatagc cttcatatac
     1261 agctttcgct ttttcagtgt cgcctttgaa acgtacaaga gaaaactctg tttctgcggc
     1321 gcccggatgt atagcggtga ccttgatctt atgacgaagc aggtcgatcc gttgcgcttc
     1381 actgatagca gcaactgcgt gtttgcttgc gcagtaaacg ttaccctctt tatatacttc
     1441 ctttgcagca gttgaaccga tattaattat atgtcccttg ccatttgcga tcatttctgg
     1501 aatcacagct ttcgaaacgt acagcagacc ttttacgttg gtgtcgatca tagtgtccca
     1561 atcctcaatc aatgcttcat caaaaagatc tctgcccgct gcgaggccag cattattcac
     1621 aagtaagtca acatgtttcc agtgttcatc cctatggtcc agcacattga aaacctcggc
     1681 cctgtttcgc acgtcaaaga ccagtggcaa tactgagaca ttgtgtttcg ctgcaaggtc
     1741 gtttgccagc acttcaagct tttccttcct tcttcctgtg atgatacaat cccatttttc
     1801 agatgcgaat ttttcggcca tcgcctgtcc gaaacctgaa gtggcgccgg ttattagaat
     1861 cgttttgctc atgctattat caattgtcgt caatgcgact tttagttgcg aatgtgcaga
     1921 aactttatca atttataaaa acgtgcaata ttatatttgc ggccgatcat gaaaaggatt
     1981 aggttacttc tcttattgtt ttttctttct tccgtcacag cgaatactgc actctgccaa
     2041 aaattgtttc tgcacgtctc aaaattgagc gatacaaaag tgaaggttga atggcgcaac
     2101 ccgtatggcg acagtatagt gcaattaaat gttcagaagt catgggacag tgtgagaaat
     2161 ttcagaacgg ttttcgtgcc gctatcccct gaacttccgc agaatggata tgtagaggaa
     2221 agttatggtt ttcccggcat gttctatcgc attttctatg tcttgagcga tggcactttc
     2281 tttttctcac aggcgaaaag agcaacaaca ggatctgatc tgacggatga actttcggaa
     2341 gcccacaagg ccgatacaaa tttcgtcgtc acagtacatg atgaagactc agtgatcgcg
     2401 gaattaactt atgcaggata caaaaggttc aaggactcga tcgttaatta taccaaggac
     2461 acgctgtact cgctcactga cgcagatgta ttgatacatt actacaacat caacatacat
     2521 tgggttcctt ccacgcatat ttttacaaac acggacggct acgtagagat ctttttagca
     2581 gatgcgcctg ataaaaatta ccggctgcgc atatttgacg aaggtcacaa accggtattc
     2641 aacatccagc acattggcga agcccaactg cttcttgata agaccaactt tgtccactca
     2701 ggctggtttt actttgaact ttttgaaagc gacaaactac gagaacggaa taaattctat
     2761 gtgccgaaag atttctagcc ggaatcttct tgcaggcatt cagtttttaa gcaatgatct
     2821 cctccccgtc gatcttgttt tcagaaaagc aaattgagac tacgttatca gtgaggattt
     2881 attcagcatt ttcacattag ttttctattt tcacttttca aaacaattgc atgagccacc
     2941 cgctctttcg tacaaaaaac atcaacaaaa ttttacgtga tgccgaaaca atggcagagg
     3001 atccacatgc aggcgccggt ttaaaacgcg tgctcacgct tcgtgacctg accttctttg
     3061 gaatagctgc catactcggt gcggggagtt tcagcagtct tgggggcgcc gtgtttcatg
     3121 gcggtccggg tgtggtaata ttatttgtaa taacagcgat agcatgcgcg tttaccgcct
     3181 tttgctattc agaattcgcg agccgcatac cggttgccgg tagtgcatat acttatgctt
     3241 atgcttcttt tggcgaattg ttcgcgtgga taattggctg ggctttaatt atggaatact
     3301 ctatcggcaa catttatgtg gcctatagct ggagcgatta ttttacatcg ttcctcaaca
     3361 agctgggtgt tcatcttccc gagtatttaa gcaccagtta catggaggtg aggcatttgc
     3421 tggagagtgg aaatacatct ccacaagtgc ttgatgcctg gaataattcg cctgtgatcg
     3481 gtgggttaca tataattttt gacctgccgg cactgatcat taatttactc ataacgatat
     3541 tggtttaccg cgggataaaa gagagccgta acgtaagcaa catcatggta gttctaaaac
     3601 tcgttgtcgt tctgatggta attttagttg gaggctatct tgtcttttcg aatggcctga
     3661 ccgcaaactg gcatcctgaa aataacgccg gaatacattc atttatgcca aacggtttta
     3721 aaggtgtgat ggcagctgtg agcggagttt tttttgctta tatcggtttc gacgcagtaa
     3781 gcgtgctcgc tgaagaaagc aagaacccac aaagggatct gccgcgcggt atgatattgt
     3841 ctctcgttat ttgtactacc gtttatattc ttcttacgct ggtgttgacc ggtgccgtta
     3901 actatagaaa cttcaatgat gttggcgatc cgctcgcgtt tgtttttgaa gaaaagaatt
     3961 taaatgttgg atggatgcaa ttttttgtcg ccattgccgc agttattgcg atgacgagtg
     4021 ttctcctggt atttcaaatg ggacaaccaa gaatttggat gacgatgagc cgcgatggtt
     4081 tgttgccccc ggtatttgaa aggatacaca agaaatataa gacaccttct tttgcaacca
     4141 ttattacagg tgttgttgtt ggcgttccga ttctttttac agacaaaaca tttgtgcttg
     4201 attttactag tattgcaaca ttgtttgcat ttgttttggt ttgtggtggt gttttattaa
     4261 ttccccgacg ggaaaaggag gccggtaagt ttcatattcc ttacatcaat gggcgtatta
     4321 tatttcctgc tcttgttgta gcgagtcttc tgattgctta cctggtcaac catcaatatt
     4381 ttcatgaact attcactttt agcctgacac cggatgagat agtgtctgtg aaggcaggac
     4441 tcaaagacgc gacgccacag gtgattcaaa ataatgtaca cgcagcttta gttgcgaaag
     4501 aaacgctcaa tgtttcaacg ataatctttt ggctcgtcag tttaattatt gctgtcgttg
     4561 cctttaagaa acaatattcg ctgatcccgc tactcggttt gataacctgc ctttatctgc
     4621 ttaccggcat gactgctaaa aactgggcct ggtttgcatc atggctcgtg ctcggattga
     4681 tcttttattt ttcgtatggc tatcgaaaaa gcaaattgtt tgaaccggca gtttgagatg
     4741 ctttgagaag acgaacgttg agaacgatca caaaaggcag ccattcaaaa taggcgatcc
     4801 tcattattaa atagtccatc acgagaaaga tgacaaaggc caacagcagg taacgatcat
     4861 attttttggt aaagaaaccg acaacgaaac tcaattcaac cacacacgcc aaagcataaa
     4921 gtaggtaaga aatagtttga tggttgatca aatacaagat gagactcgtt tgccagaaac
     4981 caggcgagtt agtgatgaga tctttatgtt gttccagtaa aacgccgctc atttcgtcga
     5041 gatgaaaaat tcctccctgc aagaatttcc ataacccggc tgatgccata atgaacagga
     5101 aaaaataacg gagcgcttca accagcagcg aaaacgtttt ttcgtttaga aaaagaaata
     5161 caaatgggaa caataaccac ggcacatgcc cctcgatcga agttgttggg tatagcgtat
     5221 aacattgaac gtaggtccag tttactacca gcatccaaaa agcagccgcc caactccatc
     5281 tcttcctgtt caccgttgct aataaaaata acggagctga atagaaaagc acatcgaata
     5341 agatacatcc cgcattattg ttcagcaacc atcgatgaat tccggttcgc atgaacagcc
     5401 aggtaaacat gtcgtctctt gtaaagaaaa atgccggccg aaactggtaa agaaacatgc
     5461 cgttcagcca tttgtagatc atcaacagat agaaaataat tgagtattga atgatgatat
     5521 ttcgccttgc cccttgtatc attgaatcgt gatcctttct cgggtctgca atttcactgg
     5581 ttttgggccg cgtaaatcat attcctgaaa ttgaagggag agacttgaaa tgtttgcatc
     5641 aattatggct gacaggtatt tctggtacca ttcattaaac gccgcctgag acaactcatt
     5701 tacgtaataa ccagaatctt cgatatgcag caggcggcca atataaatat tgaactcagc
     5761 gcggttccat tcatcctgct tttgaaaaag aacgatcggc tgtttgatct tatcccattg
     5821 ctgtggagta aagttttttg tctgcaatac ccggccgtta acaattattt caggaacaat
     5881 gtactttttt tgcggacgga taacctgcga atacattccg tacgtataag tgggagagaa
     5941 ggcgacatcc tgccttatgt tattgagaat ttgaaacgct gcaaatagaa ccagcaatcc
     6001 gaagaggaat ttgttgtgcc gccataatcg tttcaaatac attgccttcg tggtttcctg
     6061 aattaaatta aaagaaatta ttttatcttg cttcattaac tgctaaaaaa tccttatgct
     6121 gagaaagata ctgctgccgt gcctgttgat tattatatcc cttcggcttg ctgcccaacc
     6181 ctatcacaac gagtggatcg actattcaaa gacatattac aagtttaagg tccaatggta
     6241 tgatgccaat caagccggcg atcggctgca acataaagtt attcgcatta accagcctgc
     6301 gctcgcagcc gcaggattgg gcggcgtccc ggcggagcag tttcagttgt ggcataatgg
     6361 tgaacaggtt gccatttata cttccaaaca atcaggtacg ttcggctccg gcgactttat
     6421 tgagttctgg ggcgaaatgg caaatggtaa acttgataaa gaactctaca aagatccgaa
     6481 ttggcaatta tccgatgcct ggtgtttgtc gtctgatagt gctgcatatt ttctgaccgt
     6541 taactcttca ggcagcaacc ttcgacttgt cccgaccgca aataacgttc aaaacgcagg
     6601 ttctgctgaa aagaatttta cttatacagt cggaaaatat tttcgtgttg acctttccca
     6661 gggatacttt attacggaag aaggacttcc attgatgctc tcctctttcg atgagggtga
     6721 aggttattca agccatgaaa tcaattcata tctgcagcca tttgctccat tatttgcaga
     6781 tacagtcggc acctctgtta cgttgcgcgt taatatgctc ggttatagat ttaattcaag
     6841 gaatgtgaag atgttcctga atggagatag tgtaggacaa gtttcgatgc cgtttttcgc
     6901 ctccgcaaaa agcgtcatta ctgggattcc ggccagtaag ctgatccatg attcagcgaa
     6961 tatccggatt caagacgttt cgttcccggg tgatgttatc cgactcgcgc agatcgaatt
     7021 ttcgtatcaa cgcaaattca attttggaaa tgactccagt ttcgaatttt acgtgaaggg
     7081 ttccggaaac gggaggtatt taaagatcgt aaattttaat gctggcactg gtggcgctcc
     7141 gattctgtat gatcttacca acaacaaacg ttacgtggcc aacactgatg tggctgacac
     7201 cctgcggttc ctgcttgatc cttcatttcc gcagtaccat ctcttactgg tacgtgcaaa
     7261 cggatcgacc gcaaaaaatg ttacctcttt tgaatcgaag acatataccg attactcgca
     7321 ggcggcaaac cagggcgact acctcatcat cagcaatgcc cggatatacg gaagcggtag
     7381 cacaaattat gtagaacaat atcgcgcgta cagaaactcc gccgcaggag gaagttataa
     7441 cgcgaaactt tttaatatct ccgatttgga agaccaattt gcatggggtg aaaaaatgca
     7501 tccattggcc attaagaatt tcctgcgtta tgcaaggaac accttccaaa ctccgcctgc
     7561 gtacgcgttc cttatcggaa agggtgttgc atatgcacag tacctgctcg attttcaaaa
     7621 cggctatctt gaccaactca atctggtgcc aacgtttggc aatccgggct cggacaattt
     7681 gttgggttcg gatggtttta gcgatgttcc ggcgacaccg ataggacgac tatccgctgt
     7741 tactgcgaat gaagtaggtg tttatctttc caaagtaaaa gagtatgagt tggcccaggc
     7801 aaacaagagc gacagtattg aaaataaaag ctggctgaaa accgtgttgc aacttacggg
     7861 cgcgaacgat gagccttccc tgggcattca acttgacagt tttatgcgca gttataagaa
     7921 catcatcagc gatacactgt ttggcgcaaa cgtgtttgat tacagcaaga cggcgaaccc
     7981 cgagggttat gctgccggag ttcttgattt caccaatcga tataatcacg gaagcgctgt
     8041 cgtgacatat ttcggacatt cctcaaactc atcactcgat tttaacctgg aagatcccgg
     8101 caaatacagc aataccggcc gatacccgtt cttcctcgtg aatggttgcg tggcaggcaa
     8161 cgtttttgat tgggatcaat atggcacccg ctttagtttt ttgtcatcgc tttctgagaa
     8221 atatgtgctt gcgccgtcga aaggcagcat agcctttttg tcgacgagca gcttcggcat
     8281 cgtaagttac cttgacgtat ttacgagagc attttataaa gcgatgagcg tttctgaata
     8341 tcataacggg atcggcgaca ttgttcagtc aggctccgcc gccgggttag catttttgag
     8401 taatgatttt tatgggcgga tgcatgcgca acaatacaca ctgcatggtg atccggcgat
     8461 tcggctgaac ggtttcgcca aacctgatta tgctgttcaa acaaattcga taaacattga
     8521 ccctgccttt atatccgccg cgaatgactc cttcacagtg aaagtgaaga tctacaacct
     8581 gggaagagct gtgagtgatt cagtgcattt tgtgttgctt aggtataaca gtaacaccga
     8641 cagctccatt gtattcagcc gaagattacc atacatagaa gctattgatt cgttgctgat
     8701 aacgcttcct gtgattccaa accaggatac cggtacaaca aaatatgccg cttacattga
     8761 tgataaccat aagatcagcg aactcagtga aaataataat ctcgcgtatt ttaagataag
     8821 tatcgccgac aacgaccttc gacctgtcta tccttataat tatgcgatcg tcaaccacaa
     8881 caaaatttcg ctggctgctt caacagcaga tccatttgcg caatcaaaaa aatatcggct
     8941 tgaattagat actacaagcc tgttcaattc ggcggcaaag ctaaaaatga tcacaacatc
     9001 aaagggcggc ctgatcgaat ttaacggcgt caatctgtct ctaaataatg ttgtctatta
     9061 ttggagggtt gcacaggcag gtaaaaaccc acactggaac aacttctcgt ttatttataa
     9121 acaagatagc atgccaggct ttgagcaagc acatttttat cagcatacgg aatctgatct
     9181 ggacggatta aggctcgata ccggatcgcg gtccatacaa ttcgcgccca gggtagcaag
     9241 tttgttcgcc aaacaaacgg tttataaaca atttgaacag gacaatgatt ttagtgtgtc
     9301 ggctgatggg tcgttgatcg gatggagtgc ttgcgtgggc agctcaatat tatttaatgt
     9361 gctcgaccag aaaactttca gcgtttttgc taatactacg catccgtacg gtgcggcggg
     9421 tggctgtaaa ccgataactg aaaacaattt tgagtttagc acgcaaacgg caacatcaag
     9481 gaaaaatgca atggatttcc tcgataatta tgtgccggat ggatcgtatg tggtggttag
     9541 aaaaatatat gacattggta acgccgattg ggctcctact gtttgggcga aagacacggc
     9601 gttgtacggc cataacaatt ccctgtatca tcggttcaaa gaccagggac tatcgattga
     9661 ctcgtttatc ttcccacgca cttttatctt catttacaag aaaaatgatt ctgcgcacta
     9721 ctcaccggtg tcagtctttt caaagggcat ttacgatcac ataacagctt cagcgattgt
     9781 atccgtttat gatacggcag gcacggcgac ctcaccgctt ttcggccctt ctaaagcctg
     9841 gaagatgatg acgtgggagg gcagccaggt taatcacaat aacacaacat cgtttgatgt
     9901 tttggggatt gacaacaacg gaaatgattc gctgttcttc actttgaata aaacaagaaa
     9961 acagcaggac atttcaacaa tcaatgcaaa aaagtacagg aatatcaaat tacggatgca
    10021 tacgcaggac accacaacag acattccgtt gcagttgagc gactggctcg tttcgtatac
    10081 accagtgccg gaaggagcag tcgctccaaa tattggtgtg cacattccgg ctactgttac
    10141 gtatgatcat gctgtgaatg tgcaatacga tacacttgcc ggttatgtca tcttcaaaaa
    10201 cataagcaac gcaggtttta caatgctcaa ggttgatttg agtctcactg gcccggacgg
    10261 cgttgtgcac gattttcacc tgccgcgcac aaggtccttg cccgcggggg acacggttaa
    10321 ggttagctat agagtgaacg taactgcgtt accggccggg cgatacaatt tacggctcga
    10381 agtgaatccg gataatgacc agcctgaaca atatcatttc aacaacacgc tctacaaata
    10441 catagatatt gtgcgaactg cagtaccgca gtcacaggtt gccgccgctg caaaagcaag
    10501 cgaggcagat gttaccggtg taactgtgtt cccgaacccg tttaaagaga agatcaacat
    10561 tgtgtcgaat gaaaagggtg tatcaatagc gaaagtcttt acggtcacag gccagttgtt
    10621 actacagcgt aatttttcag gaactaccca attaaacata cccaacttat ccgaaggaat
    10681 ttatttggtt gaaataacat cttcttcggg caaacaggtg tttaaattga agaagcaaaa
    10741 cgattaaaat tttttattcg cccacgattc gaagaatatc ttgtacacct gtattgaagc
    10801 cgagataata aacacagcgc ccattattat gtttaagatc ctgtgactcg cgtgcagttt
    10861 ttttatcagc cagttaccgc catggatgta tatcgcctgg ccacataatg taccgacgca
    10921 agctccgatt gtgaacatat taaagtctgc cgcgatgggt ttcactgtgc cgttgtgaat
    10981 gaagtacgtt ccccaaaaaa accagaaggg gatttgcatt ggatttacaa tgctaagcat
    11041 gaatcctaat acgaaccggt tgacgttatt gtcgataagc aaaccttttt tttgcggctc
    11101 cttttgcaat acagcttttc gaacgcttaa aaaaccgagc gtgtaaaaaa gaacaaccgt
    11161 gaaccaactg atggtattaa acaacatctt gttgtgcatc atccattcgc tgctgttaag
    11221 tgcaaggcgc aaatacacga cctcaactat tgccccggca atgctgaaga gccaggcgtt
    11281 tttaaaattt tcttcaacgc cgatttgagt agccgcaaca ttcaaattcc ctaaaggcaa
    11341 ttgtcctaag aagcttacgc tgaatccggc aaacaatacg ggcagaactt cgctgatcat
    11401 tcaaattgat ttaaatgtcg cattccaaat ccaactgttt catgcgcttt acattctttt
    11461 gtgaatcagt cgccatccga atgcctttcc aaaaaggaat atatggaatt ccttttttat
    11521 aattaatgcg cccgatctca tacatgtatt tccaatgccg tgcaacgatc cggagcgcct
    11581 gcatataact gagcccgatg tcgtaaatgt gatttggttc ggaaccgacg ccattaaact
    11641 caagtattga aatatttttt cccgctttca gatcttcgat cgaagttgtt ttgatgtcat
    11701 aacggccata ataaaaatgt ttactgtaca aactgatctc gtcgaacacc cgtagcatct
    11761 tatcgtctac ctcatgctga agatttaaaa acgttgcgcc acgattatga ttaccgagtt
    11821 cgttcaaaaa gtagatctcg ttttcaggaa ttatttcatc caatctttcc ttatgcttgt
    11881 gcttttgttc accctcgatc ataaatgctt tgggatgcga ttcgatgagc tttcgcaatg
    11941 ttgagacacc gtcgcctttc acgtgcaaat attcttttgc gatcatcccg gtgatcatgc
    12001 cgttttgctc gtcagggtaa cgaacgtgaa aaacacttaa ctccagcggt agcgttatca
    12061 actcctgaac catatatgtg gaaggcaata gggcatgata tcttcttaac tgctcttcat
    12121 tttcaatttt cctgaacaaa agacctttgg ttccaacatc cggttttaca gcaaaaggaa
    12181 atttcagccc ggcctttttt atttggcaca aaactgtctc aaacgcttgt cccggctcga
    12241 tataaatacc gatcgggcaa aattgcgcgg gtaattgcgt aaacatttcc tgcttggttt
    12301 caccttcgaa accggagaaa tacatggttg gatttacatt ggaaaagaac caaaatcttc
    12361 ggcttaccat ccagtagtag aaccataaaa aaataaacgg agcgtaaatc acaaagaaag
    12421 gcagccgttc ccagttaaag attcttttca accaacagca ttttagtggc gcaaaaataa
    12481 gggtgccggc ttatgcagca acggtttctt tatcaataag caaacagttt tgctttattt
    12541 ttgaaccgtc caaaaaaaag aaagaccgct tcaacaaaac gcacattatg cacattccac
    12601 gcatggcaga tatgatggca aacggggaat cgccggaaat tttattttgg gtgggatgtg
    12661 ccggcagctt cgatcaacgg gcgcaacgga taacgaaagc atttgccagc atacttgata
    12721 agatcggaat taaatatgcg atcctcggta aagaggaggc atgtactggc gacccggcgc
    12781 gcagatccgg caatgaattt ttgtttcaaa tgatggcgta caacaacatt caaatcttga
    12841 atggatacgg cataaaaaaa attgtaacaa cctgtccgca ttgcttcaat attctgaaaa
    12901 atgagtaccc ggaattaggc ggaaattacg acgtcatcca ccacacaact tttttacaac
    12961 aactgatcga tgacggtaaa ttaaaattcg agggaggcag aaactttaaa ggcaagcgta
    13021 ttacctacca tgatagttgc tatctcgggc gcgcgaatgg aatttacgag gctccgcgca
    13081 aacttttgga attgctcgat gcagaactag ttgagatgaa acgttgtcgg accaaaggtt
    13141 tatgctgtgg cgccggcggt gcgcaaatgt ggaaagaaga ggagaagggc agcacgcgta
    13201 taaatttcga aagaacggaa gaagcgatca acacaggctc gaacattatc gcatccgcat
    13261 gtccttattg caataccatg ctaacagacg gcattaagaa taaagagaag gaagatgttg
    13321 tgaaagtaat ggacatcgcg gaattgatcg ctgcggacat cgaataaact gctgccgtga
    13381 atgcgaatta cgatagcgac catgtacacg gaaattcatt tgtaactttg tcgcatggac
    13441 ttttcataca aacaccttct gccacaagac ttcggtgata attcgagggt gtggatctac
    13501 caggccgatc ggccgttcaa caattctgaa acatttggaa taggaaaagc actgaacgat
    13561 tttgttgtta actggaaaag ccatggcgta cccgtaaagg gttatgcaaa tattttcttt
    13621 gatcagttca taatcttaat ggccgacgag gaggcaacag gggtcagcgg ctgcagcatc
    13681 gatagctccg tgcatgtgat ccaggaaatt ggtagcaagt ttagcgtaga cctgctgaac
    13741 tggcaatcgc tcgcatttgt tgtcgacgac aaagttcaaa ttatttccag gcaacaattc
    13801 aacgatgcac tagaccagag tttgataaca ccccgaacct tattctttaa taatgttgtt
    13861 acgacaaagc gggatttgga ggaaaaatgg atcattccgg taaatgaaag ctggttgaag
    13921 acgaaaatta aacaaacagt tagctaaaac atttactttc atttttcaag ggcgcaagta
    13981 gctcatccgg tcgtcccgca tgtgtgcagg atccaggcgg aggagttctt acaaataaat
    14041 ttgaaattag cggaagtagc tcatccggta gagcatcagc ttcccaagct gagggtggcg
    14101 ggttcgagtc ccgtcttccg ctccaggaaa cccaatcaac aaacaaatgc gcttaaagcg
    14161 taaaaataat cgtagagtaa ctgccaacct cgaacttcaa acttcaaaca tcaaacctca
    14221 aagaacactc gctgccattc tgtctcaatt ttaatatctt tgccgctcaa ttttcggata
    14281 atgattgacc tggttggaaa taaggtgcac gacgagacgc ggcagggcga gccattcgct
    14341 ccgttcgccg atgaggcaaa tgactacgga aagacatttt acatagaaag ttatggttgc
    14401 cagatgaatt ttagcgacag cgagattgtc gcgtctattc tgcagcagca gggatttggg
    14461 gctacgcgcg atgctgcctc agcagacctt atacttttaa atacctgttc gattcgggaa
    14521 aaggcggagc aaacagtgcg cagacgcctg accgaattcc gaaagatcaa acagtccaag
    14581 cccggtttgc tggtcggtgt attgggctgc atggccgaaa ggctcaaatc aaaattactt
    14641 gaagaggaga agttggttga catcgttgtt ggtcccgacg cttatcgcag cctgcccgcc
    14701 ttaattgaag aagcagagtc cggccaaaaa gcagtgaacg tattgctgag tcgtgacgaa
    14761 acctatgctg atatatcccc tgtcaggtta gacagcaacg gtgttaccgc atttatctcc
    14821 atcatgcgtg gctgtaacaa catgtgcagt ttttgcgtgg tgccctttac acgcggaagg
    14881 gaacgcagcc gcgatgctta ctcaattgtg cgagaggcga ggcggttatt tgaacaaggc
    14941 ttcagagaag taactctcct tggccaaaat gtggatagtt actattgggt ggatgaagaa
    15001 aaagacgaga tcataacatt cgccaggttg cttcaaaagg tcgcttcgat agatccatta
    15061 ttgcgtattc gtttcagcac gtctcatcca aaagacataa ctgacgaggt actgcatacg
    15121 atggtgaagt acgaaaatat ttgcaagtat attcatctgc ccgttcaaag tggcagttcg
    15181 cgcatcttgc agttaatgaa ccggacctat acgcgtgaat ggtacatggc gaaggtgaaa
    15241 cggatacgcg aggtaattcc ggattgtggc atcagttccg atatcattgc aggtttttgt
    15301 acagaaacgg aaaacgatca tttggaaacg ttggacgtga tgcagcaaag catgtatgat
    15361 atgagctata tgttttttta tagcgaacgc ccgggtacgc tcgctgcacg acggtacacg
    15421 gatgacattt ccgaagaggt taaaaagaga agattaaaag acatcgtcga gctgcaaaat
    15481 aaactgtcgt acgaaagtaa caggctggat gttggaaaaa cattcaaagt gttgatcgaa
    15541 gggaacagca aaaagagcga atcggagtgg aggggtcgca acacacaaaa caaagtgatc
    15601 gtatttccca aagccaactt caattataaa aaaggtgact acgtgatggt taaggtgaac
    15661 gatttcacac aggcaacctt gattggcgac gtcgtttaga attcgctcgc cggacgatca
    15721 aaaaattttt taaatagatt ctcagtttaa ggatcaggac atgacagata ttcaatcaat
    15781 aaaaaacagg tttggaatta ttggtaactc gccggctctt aattatgcac tgcaggtggc
    15841 ttcccaggta tcaggcacgg atttaagtgt gctcattgtc ggggagagcg gagttggaaa
    15901 agaggctttt tcgcaaataa tacatgcgct ctcagcgaga aaacataatc catttattgc
    15961 agtcaattgc ggagcgatcc cggaaggaac gatagattcg gagttatttg gacatgaaaa
    16021 aggatcattc accggcgctg ttgaaagccg taaaggatac tttgaaacgg tgaatggcgg
    16081 aacaattttt cttgatgaaa taggagagat gccactcggc acgcaggcac gtttgcttcg
    16141 cgttctggag acaggcgaat ttatccgcgt gggatcatct aaagtacaaa aaacggatgt
    16201 gcgtgttatt gcagcaacaa acaaggacct ctaccaatcc actcataacg gaaaatttcg
    16261 agaggatttg tattaccgtt tgagcaccgt gcctattcgc gttcctgcgt tgaaagatcg
    16321 caaagaagat atcatattat tattcagaaa gtttgtagtc gactttgcag agcgatataa
    16381 aacgacgcct gtgcagttgg aggatgaggc gaaaaacctg ttaattaact atccgtggcc
    16441 gggcaatgtt cgtgaattaa agaatattgc agaacagtta tcagttttaa gtaagcagaa
    16501 cgttgtaacg gcaatggagt tgcagcattt tcttcctgaa aagatcgtca atcgtttacc
    16561 ggtgctggca gtttcacacc aggggaatgg cgactttgcc aacgaacggg aaatattata
    16621 caagctgttc ttcgatatga agaaagacgt tacagagttg aagaagatgt tccttgagat
    16681 cctgaaaaac cctgcgctcg caaacaatgc cgcaaatttt acttctgagt cgttacaaaa
    16741 cgattacctg ttgaatggag aaacgaatta taacaccgcg gttttatcgc ctgttgggca
    16801 gcctgcaatt ttacccggag catcgcaggg taatcagccg gtgatcctgc cacataagga
    16861 tgaaatccat catcacgaag aggttgagga gtcgctcaac atcatggaca aagaaaagga
    16921 gcttatcata aaggcgctaa aaaagcaccg tggaaaaaga aaagatgccg cacttgatct
    16981 tggtataagt gaaaggacac tttatcgaaa gttgaaagaa tatgatatta atgaataaaa
    17041 agagtgactt gtcgatcgtc acttgtcgtt ggtcggtgaa atacgtgagc gccatttttg
    17101 cgccgttgtt gatattactt tttacatcgt gcggccccta tacgtttcgt gatgtgtctg
    17161 ttgattattc aaagatcaaa accgttaaag ttggttttat cgataacaaa gcgcgatacg
    17221 ttaacccgca gcttagtcct cgtctgacag acaatctgaa acaaaaaata aacaattaca
    17281 cgaagcttac gcaggtaacc ggcgacgatg caaattacca gatcaatgga gtcataagcc
    17341 gatacgatgt ttccacttcg gcaataagca gcaaccaaag tgcaacgaac cggttgacgg
    17401 ttgccgcaaa tattacattt tacaatgcgg tcgataataa gacggataat tttgcagtaa
    17461 gccgcgattt tgatttttcg gcaaacttat cattacagca agcagaggga caattgctcg
    17521 atgatgtgat aaatcagctc acggaccaga tattcaacca cattttctcc aactggtaag
    17581 aagtcgtatt ttcacctgct ttaacgaaca tgctgtcatc ctctgaaaat attcttaaga
    17641 gtcttacagg gaaatcgtct tttcacgaag tgaccgcggc agaacttcag gagctcgcag
    17701 aacagtatcc ttactttggt gttgctcaat acctgctcgc taaaaaattg ttttttgaaa
    17761 acaacgatga atacaagcat gttattcaaa gagcagcgct gcatttttcg aacccggcgt
    17821 ggctgaactt taatttcacc gatgaacacc aaacagaaga tgttataaca acacaggcaa
    17881 gttcattttt agaaacgcac ttgaaggaag acaatgagga acccgctgaa gagtatgcag
    17941 atgttgacgc aggaacaagt gaaaaattat ccagcatttt aaaagagcat gttgcagcat
    18001 ttgaaaagcc ggtcgagcat gaatcggcat tgaatattga aagcacgcca tatcatcgcg
    18061 tagactattt cgattcgcag ggtatcaaac tggactctga aaaagaaact gacaagctcg
    18121 gagttcagtt gaagcgattt accgactggc tgaaacaaat gaaacgtgtc agctcaaatc
    18181 cgtcagatct gggcacggat caaaaagccg aatctgaagt tcaaaatctt gcggagcatt
    18241 ccaatgatcg tgaggaagtt gttactgagg cgatggcaga ggtgctcgca aaacaaggca
    18301 aaccggagca agccattcgc atttatgaaa aattaagttt tctgaatccc tccaaatccg
    18361 cttactttgc ggcaaaaatt ggcgatctaa aagcatagca atgacgtttc ttatattcat
    18421 tctcattacc atagtgtgcg ttatcctggg gttgatagta ttgatacaaa atccgaaggg
    18481 cggtggtcta agcggtacat tggctgggtt taacaaccag tttatgggtg tcaagcaaac
    18541 gaccgatgtg ctggaaaaag gcacgtggtt gttcgtgtca atacttggtg cgctctgtat
    18601 tttgtccgta gctttcttgt ctggcgcagg cggagccagc aataattcac tgcaggatat
    18661 aaacacgtcg acggttccaa cacagcaggc tccaaataat acgcagcaac aggcgcagcc
    18721 taacacattt cagttggata cgaccaaata atttaattgt ttttgttctc gtcttttgcc
    18781 cgatagtata agggtagtac atcagatttt ggttctgagt gtcttggttc gaatccaggt
    18841 cgggcaacca gggaaatttt aaaagccttg aatgtttact ttcagggctt ttttgattgt
    18901 caggccacag tacagggcat atgtttttgc tacacttctc gggatgacag cgatcatctt
    18961 catcttctac aaagaccaca cacgaacaaa tgcctttttc caatattttc ttgaagacaa
    19021 tatttgcagc atagttatta acccctaatg aagttgaacg gaggctacag ccggaactcg
    19081 acttggttgt cgccgattaa tctgccctca ctcgcctggt gtgacaatac tcatgttaac
    19141 gattcgttgg taaatggcta tctcagttat cgcattgcaa acgcgttatg ttgaatcatt
    19201 gctacaattg atgagcaatg aggacgctga gaagcttaag aaagtgataa taacaaactc
    19261 aatgtatgaa gatcaattgc ggcatgcttt tttcacatag atagtaaaac atacataata
    19321 tgaaaaagct ttcaataatc gtagccctgt ttatggtaat tggtgtctcg attagttctt
    19381 gcagtgcatc tgcacgagta ggtacaaaga accatgaggt tggtgctggt acacatgtca
    19441 attaagaatt gatcaataga gacgtgcgat cattaaacgg cggcgttatc aattgaaccg
    19501 gtctgctgct aataacgtta tgaagcccca cgagagcggg gcttttttat gccgtgttgc
    19561 gtcctccttt cgattcagta caagtggagt acctgtttcc tggattcagt tccatcccga
    19621 cgcaaaattg aatgctcctt gtttctgcga cttttggtaa acctatattt ggacgagacc
    19681 ggcttacaac agccgcaaga attccgtcca ccggaacata gcataacgga agtaaatctg
    19741 ccaaccaaca aaaaatgctg ccttttattt cagtccacgg gtaattaatg aagctgtttg
    19801 atttacttcc cagtctacag aagaaacatt ttttacgtac ggtctgctta caactgcttt
    19861 tacaaggtca gagtgcatga agtcatccat tgcagttttg ttctcccaca aatagaagcc
    19921 gccaaaagta tttttttcat catctgtcaa ccagactttt gagataaggc cttttacgtt
    19981 tgctaaaatc ggagcgtccg gttcaaccat ttgtttcaaa tattccgcct gggaaatgtt
    20041 gtttaattga taggtgatta gttgtgcgtg cattgttttg tttttaagtg atgcttacta
    20101 tttgtaggat tttcaggttg ctcctttatt tatttttctc cggcacaagt ctgccctcgc
    20161 attggctcgc actaagactt gcgccagatg gatcgcgcta agacttgcgc cagatgggat
    20221 tagttgtttt gtttttaagt
//
LOCUS       DASQJI010000560         2141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_530025,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000560 DASQJI010000000
VERSION     DASQJI010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530025"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1853)
                     /locus_tag="VEV83_15215"
     CDS             complement(<1..1853)
                     /locus_tag="VEV83_15215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HYK46524.1"
                     /translation="MLDAKIPSGPLEQKWTYYKGHCKLVNPANKRKLEVLVIGTGLAG
                     ASAAASLGELGYKVKAFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSIFRLFYDTIKG
                     GDYRAREGNVHRLSEVSVNIIDQCVAQGVPFAREYGGLLSNRSFGGTQVQRTFYAAGQ
                     TGQQLLIGAYQALERQVALGNVKMYSRHEMLDVVNIDGKCRGIICRDLITGELQRHFG
                     HAVLLCTGGYGNVFYLSTNAMGCNVTAIWKAHKKGAFFGNPCFTQIHPTCIPVTGDYQ
                     SKLTLMSESLRNDGRIWVPKNKGDNRPANEIPEDDRDYYLERRYPAFGNLVPRDVASR
                     AAKERCDAGYGVGTSKQAVYLDYADAIDRYGRGEASKLGIENPSTDEIRRLGIEVVKE
                     KYGNLFDMYEKITGEDPYVVPMRIYPAVHYTMGGLWVDYELQTTVPGLYALGECNFSD
                     HGANRLGASALMQGLADGYFVIPYTIGNFLADEIRIPSIPTSHPAFEETEKNVKWRLE
                     KLMSIQGKETVESLHKRLGKIMWDKCGMARNEQGLQTALKEVRQLKNEFWSNVKIPGS
                     INEFNPELDKAGRVADFIELGELMCIDALQRNESCGGHFREEYQTPEGEALR"
     gene            complement(1950..>2141)
                     /locus_tag="VEV83_15220"
     CDS             complement(1950..>2141)
                     /locus_tag="VEV83_15220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase"
                     /protein_id="HYK46525.1"
                     /translation="VYILGCIALAYHLAHGFQSAFKTLGVHNKRYISMLIWLGYAFAI
                     LVPLAFIMMPLTFYFGWLK"
BASE COUNT          521 a          563 c          442 g          615 t
ORIGIN      
        1 cgcaacgctt caccttcggg tgtttgatat tcttcccgga agtgtccacc gcaactttca
       61 ttgcgttgca gcgcatcgat gcacatgagt tcgcctaact caataaaatc tgccacacgc
      121 cctgctttat ctaactccgg gttgaattcg ttgatgctgc cgggaatttt cacgttgctc
      181 caaaattcat ttttcaattg tctaacttct ttcaaagcag tctgcaatcc ctgctcgttc
      241 ctggccattc cgcatttatc ccacatgatc tttcccaaac gtttgtggag gctctcaaca
      301 gtttcttttc cctggatact catcaatttt tcaagccgcc attttacatt cttttccgtt
      361 tcttcgaaag caggatgtga agttgggatc gatggtatcc tgatctcatc agccagaaaa
      421 tttccaatcg tatacggtat cacaaagtat ccgtcggcta atccctgcat taaggcgctt
      481 gcacccaaac ggtttgctcc gtggtcgctg aaattgcatt cgcccaacgc atacaagccc
      541 gggaccgttg tctgcaattc gtagtcaacc caaaggccgc ccatcgtata atgcaccgca
      601 ggatagatac gcattggaac cacgtacgga tcttcacctg tgatcttctc gtacatgtcg
      661 aaaaggttcc cgtacttctc ctttactact tcaataccca atcttcttat ttcgtcggta
      721 gacggatttt caattccgag cttgcttgcc tcgccccttc cataccgatc gatcgcatca
      781 gcataatcga ggtacacagc ctgctttgac gtgcccacgc cataacccgc gtcgcatctt
      841 tctttcgcag cgcgcgacgc gacatccctt ggcactaaat ttccgaatgc aggatatctt
      901 ctttctaaat aataatctct gtcgtcctca ggtatttcat tcgcaggcct gttgtcgcct
      961 ttgtttttcg gcacccagat tcttccgtcg ttgcggaggc tttcactcat caatgtgagc
     1021 tttgattgat aatcgccggt taccggaatg cacgttggat gtatttgtgt gaaacatggg
     1081 ttgccaaaaa atgctccctt tttatgcgct ttccaaattg cggtcacgtt gcatcccatt
     1141 gcgttggttg agagatagaa gacgttccca taaccgccgg tgcataagag aacggcatgg
     1201 ccaaaatgtc tttgcagttc gccggttatg aggtcgcggc aaatgatccc gcggcatttt
     1261 ccgtcaatgt tcaccacgtc gagcatctca tgacgcgaat acatttttac attgccgagt
     1321 gctacttgcc tttctaatgc ctggtacgca ccgatcaata attgctggcc agtttgccct
     1381 gccgcataaa aagttctttg tacctgtgtg ccaccaaaac tcctgttact taataaaccg
     1441 ccatattctc tggcaaatgg aacgccttgc gccacgcatt ggtcaatgat gttgacgctt
     1501 acttctgaaa gacgatgcac attgccttcc cgtgcacgat aatctccgcc tttgatcgta
     1561 tcataaaaca agcgaaagat gctgtcgcca tcattctggt aatttttcgc tgcattgatg
     1621 ccaccctgtg cggcgatcga gtgtgcacgc cgtggagagt cctggaagca aaacgctttt
     1681 actttgtaac caagttcacc gagcgaggcg gcagcggaag ctccggccaa acctgttcca
     1741 atcacaagca cttccagttt gcgtttgttt gccgggttta ccagcttgca atgtccttta
     1801 taataggtcc acttttgttc taaaggccct gaaggaattt ttgcatcaag catattgcaa
     1861 tttgaaaatt tgaaaatttc agaatttgag aatgagcttt aaaacatctt acacaggctc
     1921 gacgcgcacg gctcaaggct cgcagctcct tatttcagcc atccaaaata aaaagtaagc
     1981 ggcatcatta taaaagctaa aggcacgaga atggcaaaag cataaccgag ccagatgagc
     2041 atgctgatat atcttttatt gtgaacaccg agcgttttga atgcactctg aaatccgtga
     2101 gcaagatgat aggcgagtgc gatacaaccc aaaatataca c
//
LOCUS       DASQJI010000561         3002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2373797,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000561 DASQJI010000000
VERSION     DASQJI010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2373797"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            419..1639
                     /locus_tag="VEV83_15225"
     CDS             419..1639
                     /locus_tag="VEV83_15225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46526.1"
                     /translation="MLFSQVVGQQQVKQHLLDMVQQNRLSHALLFLGTEGSGALPLAL
                     AFAQYVSLLPASAKQPAVEISLFGEAASSVPLEFPKTPDDADAFMQKQPGFSKAENYV
                     HADIHYSYPVIPKKSGDKPVSTDYAAEWREFIQQYPYGNVYDWLQFIDAENKQGNITA
                     DECNDIIHKLSLKSFESPWKILVMWMPEYLGKEGNKLLKVIEEPPPDTLFILVAENED
                     AILPTIVSRCQLVKISAIRSSAISEALIQRGKTDPQKAQQIGAIAQGNYREALQLLQD
                     TSEDWQSLLREWLNVTLKTGPTAQVKWVEEVSRLGREKQKQFLLYFMHLLQQSIRLRF
                     HEGEAFNIAETEKDFAVRLNKIASVNHQRAIIEELNNAVYFIERNANAKILFHALTIK
                     LYHVIKNNALILTG"
     gene            1983..>3002
                     /gene="ricT"
                     /locus_tag="VEV83_15230"
     CDS             1983..>3002
                     /gene="ricT"
                     /locus_tag="VEV83_15230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HYK46527.1"
                     /translation="MGCGNCGSGKPNGCKSNGGCNTGSCNRMNVHDWLWNLPMSDVDS
                     ACKVVEISFNQGSRKDYYHNPSLQYYDKGDMVTVEASTGFDVGEVSLTGELVRLQLKK
                     KNISEFDPDMKKILRRSTDKDLDFLEKNKAREREALITSRVIARKLNLDMKLIEVEIQ
                     ADGKKATFFYTADDRVDFRELIKQFAAEFRLKVEMRQVGIRQGAAKVGGIGSCGRELC
                     CATWLTDFKSVTTTAARYQNLSINQTKLSGQCGRLKCCLNYELDTYLDALQYFPDNAD
                     ILETTKGTASLIKKDIFKNLMWYILEGGAKHYPLTIRRVKEIKQLNLKGQRPDDLQPV
                     ELLSEK"
BASE COUNT          946 a          681 c          694 g          681 t
ORIGIN      
        1 catggctttc aaacgctgca tctaaaacga attgtcgcga aagcgcttcc gaaaaatatc
       61 gggtcactga aagtgatgca aaattgcaag atgaattacg ttggtacccg cacggaagat
      121 ggactgctgc tccacgtgtt tgaacttaat cgaacataat tccggatcca aataacaaga
      181 accaaatcgc aagaaccaaa tgataacagc taagtcgcag gaaccaatgg acaagaaccc
      241 aaaaaaaatc gcaagaaaca aatcacaaaa cgaaatctca agaaacaaaa tctcaagcac
      301 caaatgacaa caatcaaacc ccctcctaat taactaacaa actaataaac caataaacta
      361 ataaaccact aacccaactt caaacttcaa acctcaaact tcaaactatc ttcgccacat
      421 gctcttcagc caggtcgtgg gacagcaaca ggtgaaacaa cacctgctcg atatggttca
      481 gcagaaccgg cttagtcatg ctctgctttt cctcggaacg gagggcagcg gtgcattgcc
      541 tcttgcactt gcctttgctc aatacgtcag tttgctgcct gcgtcggcaa agcaaccggc
      601 tgtggagatc tcattatttg gagaagcagc gtcgtctgtg ccgctcgaat ttcccaaaac
      661 gccggacgat gcagatgctt ttatgcaaaa gcaacccggt ttctcaaaag ctgaaaatta
      721 tgtgcatgcc gatattcatt attcataccc ggtcattcca aaaaaatccg gcgacaagcc
      781 ggtaagcacc gattacgccg ctgaatggag agaatttatt cagcagtatc catatggcaa
      841 tgtttatgac tggctgcaat tcatcgacgc agaaaataaa cagggaaaca taaccgcaga
      901 cgaatgcaat gacatcattc acaaactcag ccttaaaagt tttgaaagtc cctggaagat
      961 cctggtgatg tggatgcctg aatacctggg caaggaggga aataaacttt tgaaagtgat
     1021 cgaagagccg ccgcccgata cgctttttat tttggtcgcg gaaaatgaag atgcgatact
     1081 gccaacgatc gtaagccggt gccagctggt aaaaataagt gcaatcagaa gttctgcgat
     1141 aagtgaagcg ttgatacagc gtggcaagac tgatcctcaa aaggcgcagc agatcggcgc
     1201 aatcgcccag ggaaattacc gggaggcatt gcagcttttg caagacacgt cagaggactg
     1261 gcaaagtttg ttgcgcgaat ggctgaacgt tacgctaaag acgggtccca ccgcgcaggt
     1321 gaaatgggtt gaagaagtga gccgccttgg acgcgagaag caaaagcagt tccttttata
     1381 ttttatgcac ctgcttcaac aaagcatacg gctgcgattc catgaaggcg aggcgttcaa
     1441 cattgctgaa acggaaaagg atttcgcggt ccggctcaat aagatcgcgt cggtaaatca
     1501 ccagcgggcc atcattgaag aactcaacaa cgccgtttat ttcattgagc gtaatgccaa
     1561 cgcaaagatc ctcttccatg ccctgacgat caaattatat cacgtcatta agaacaatgc
     1621 cttaattttg accggttaag actgtaagta attcaatatt tgcagtgaag tgaagaagaa
     1681 ttttgtggag gtcagcaaag gttcattaac ggatcgtccc ttgcgtcgca cacttgtact
     1741 ccataacata tggcggcaat ggtgcttgat ttgtaaaccg cttttcagca tatcaatccc
     1801 gtaaacggga ctatttgaaa acgttcttac gatataatca cttgagctcg acagcaagtc
     1861 ctgtataaac aaaccaggac ctggtcgacc acgacgcacc ggcactctac tgctatacct
     1921 tgcaggtcta cacacaattc tcgcgatttc aaaatcagaa ttggcaaatt tattagcgca
     1981 tcatgggctg tggaaattgt ggttccggaa aaccgaatgg atgtaagagc aatggcggat
     2041 gtaacaccgg cagttgtaat cgcatgaacg tgcacgactg gctttggaat ctgccgatga
     2101 gcgacgttga cagcgcatgt aaagttgttg aaatcagctt caaccagggt agcaggaaag
     2161 attattacca taacccgtct ctccaatatt atgacaaggg cgacatggtc accgtcgaag
     2221 cttccacggg tttcgatgtt ggcgaagtaa gcctgacagg agaattggtc aggctgcagt
     2281 tgaagaaaaa gaacatatcc gagtttgatc cggatatgaa aaagatcctg cgccgcagta
     2341 ctgataaaga cctggatttt ttagaaaaaa ataaagcacg ggagagagag gcgttgatca
     2401 ccagccgggt gatcgcaaga aagctgaatc tcgacatgaa gcttattgaa gtggagatac
     2461 aggcagacgg caagaaggca actttttttt atactgctga cgaccgtgtc gacttccggg
     2521 aattaataaa acaattcgcg gcagaattta ggctgaaggt tgaaatgcgg caggtcggca
     2581 tcaggcaggg agctgcgaaa gtaggaggca tcggcagttg cggccgcgaa ctttgttgcg
     2641 ccacctggct caccgatttc aaaagcgtga ctactaccgc cgcgcgttat caaaatcttt
     2701 caatcaacca aacaaaattg agcgggcaat gcggaagatt aaaatgctgc ctgaactacg
     2761 aactggatac ttacctggat gcgcttcaat attttcctga caacgccgat atattggaaa
     2821 ccactaaagg cacagctagc ttgataaaaa aagatatttt caaaaacctg atgtggtaca
     2881 ttttagaagg cggcgcaaaa cattaccccc ttactattcg gcgggttaaa gaaataaagc
     2941 aactgaacct gaagggccag cgaccggatg atctgcagcc ggtagaacta ctttctgaaa
     3001 aa
//
LOCUS       DASQJI010000562         3164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1913470,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000562 DASQJI010000000
VERSION     DASQJI010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1913470"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VEV83_15235"
     CDS             complement(<1..261)
                     /locus_tag="VEV83_15235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46528.1"
                     /translation="MKRICLVAMMSFILFSCKREWITPTISIMPAIPWEDSSANHPLN
                     AQLTALINKYTAKGLPGIALLVTDKNGTWVGSAGKADIEHNKL"
     gene            complement(307..906)
                     /locus_tag="VEV83_15240"
     CDS             complement(307..906)
                     /locus_tag="VEV83_15240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46529.1"
                     /translation="MKTVCYIVLLVVSVCEATAQPFKAQYISLAISNNAPAKPFQKFG
                     GFFTQNFHPGIEAAYRFDWRVGKKHAWFQDIQASYFYHRFVQHGISVYTDGGYRYKLT
                     RHLAADGSLGIGGVLSIPATANLSLNDKGEYEYKKNAARLQAIIPLSINVSYIVDPSA
                     KRRVELFWKYQQRVQFGFIKEYVPVLPYSSLSLGVALQL"
     gene            1177..2172
                     /locus_tag="VEV83_15245"
     CDS             1177..2172
                     /locus_tag="VEV83_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46530.1"
                     /translation="MQPTREQTAFFKHLKDKLPSHISLVDEVSDLLNISIDSAYRRIR
                     GENTLRFDEIQLLAKHYSVSLDQFLGLRPDAIMFSGNFVNESKFDFDSYLKGIVQKLV
                     QINSGSQKEISYFNKDIPIFHHFMFPELAAFKCYFWCRYNLNHPVYNKGQFLINDFVE
                     IFNKTGKSIADLYLQIPSTEIWNVDCINTTIMQIDYYRECKVFRSDDDIRTIYECLEK
                     LVDHIEQQVEAGCKFPFKQPQKKSNARYKFFVNEFVLGDNTVLIHVDGQKAAIVAHSV
                     INFMETTDPKFVAYISDTFDTLIKKSKLVSEIGEKDRQLFFETMRQRIHDKKKLI"
     gene            complement(2187..2669)
                     /locus_tag="VEV83_15250"
     CDS             complement(2187..2669)
                     /locus_tag="VEV83_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HYK46531.1"
                     /translation="MPDKQTIDKAKKDAAEGKSPSTQAGEFVHDEIEKIRRGEHGARN
                     TKQAIAIGLSEARRAGVKLPPPKSGGAELKKKAKQDEERAGKPVSQTRSRARRNALKK
                     EPTGTVSSQALSKQGRSAAKQRSASDRSKAAKKAARTKGPKERSHAARKAARTRAKKK
                     "
     gene            complement(2801..>3164)
                     /locus_tag="VEV83_15255"
     CDS             complement(2801..>3164)
                     /locus_tag="VEV83_15255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051604 - protein maturation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lipase maturation factor family protein"
                     /protein_id="HYK46532.1"
                     /translation="YKGLPVLLDKMPPQIAPYQLRLDWQMWFASMYTPAEYPWTLNLE
                     WKLLHNDPKTLSLFAGNPFPATPPRYIRAVLYHYSFAKPGNTHGLWWTREKVSNWLPA
                     LSVDDPRLIAFLKSYGWL"
BASE COUNT          803 a          693 c          718 g          950 t
ORIGIN      
        1 cagcttattg tgctcaatat ctgctttgcc cgcgctaccc acccaggttc catttttatc
       61 ggtcaccagc aaggctatac ccggtaaacc tttcgcagtg tatttattta taagcgcggt
      121 cagttgtgcg ttcaaaggat ggttagcgct gctgtcttcc catggaatag caggcatgat
      181 tgagatcgtc ggcgtgatcc attctctctt gcacgagaaa agaatgaatg acatcatggc
      241 gacaaggcat attcgtttca tgttcgtaaa ttttaagatg acttttttcg tttgaaaaag
      301 tttgccttaa agctgcaagg cgacgccgag tgataaactg ctgtaaggca agacgggcac
      361 gtattcttta atgaacccga actgcacgcg ttgctggtat ttccagaaaa gttctactcg
      421 tctttttgct gatggatcga cgatataact cacgtttatt gatagtggga tgatggcttg
      481 taaacgcgcc gcattcttct tgtattcgta ttcacctttg tcatttaaac taaggttggc
      541 tgttgcagga atgcttaata ctccaccgat gccgagagaa ccgtctgccg ccaggtgccg
      601 ggtaagtttg tatctatatc cgccgtctgt ataaacgctg atgccatgtt gcacgaaacg
      661 atgatagaaa tagctggcct gtatgtcctg gaaccacgca tgcttctttc caaccctcca
      721 gtcgaaccga taagcggctt cgattccagg atggaaattc tgcgtgaaaa atccgccgaa
      781 tttctgaaaa ggttttgccg gagcattatt tgagatcgca agagaaatgt attgcgcttt
      841 gaacggttga gcggttgcct cgcaaacgct cacaacgagt aagacgatgt aacaaactgt
      901 tttcatcact tgaagatttg gtcggttaag aaaatgtttc tgtaagtgct ggtcgccggc
      961 ggttcagtta attttctaac gtaaagctct aacgagtgca agcctgttcc taattgaagt
     1021 gaacgaaaac ggaaatgcag ttttgcattt ttggtaaccg gtggtatgga aatatttacc
     1081 gttttgcact ttttgcaaac gaagcggcag tttgggggaa tcggtattgt ttctatctaa
     1141 ggataatgat atttttgttt gaaccaaatg ccggctatgc aaccaacaag ggaacaaact
     1201 gcttttttca aacatcttaa agacaaactg ccttcgcaca tatcgctcgt tgatgaagta
     1261 tccgacttac taaacatcag tattgatagc gcctacagaa gaattcgcgg tgagaatacg
     1321 ctgcggtttg atgaaataca attgctggca aaacattatt cggtatcgct cgatcagttt
     1381 ttgggacttc ggccggatgc gattatgttt tcaggaaatt ttgtaaacga aagcaagttc
     1441 gactttgata gctatctcaa agggatcgtg caaaagttgg tgcagatcaa tagtggtagt
     1501 cagaaagaga tctcttattt caacaaagac attcccattt ttcatcattt catgtttcct
     1561 gagctcgcag cattcaaatg ctatttctgg tgcaggtata atctgaatca tcctgtttat
     1621 aacaaagggc aattcctgat caacgatttt gtggagatat ttaataagac agggaaaagc
     1681 attgcagatc tttatttgca gatcccgtca acagaaattt ggaacgtcga ttgcatcaac
     1741 accaccatca tgcaaataga ttattaccgg gaatgcaagg tcttccgttc agatgatgat
     1801 attcgtacga tctatgagtg tcttgaaaag ctcgtcgatc atatagaaca gcaggtcgaa
     1861 gcaggctgta agtttccgtt taagcaacca cagaaaaaaa gcaacgccag gtataagttt
     1921 tttgtaaatg aattcgtgct gggcgacaat acagtgctta ttcatgtcga cggccagaaa
     1981 gcggccatcg tagcacatag cgttattaat tttatggaaa caactgaccc gaaattcgtt
     2041 gcgtacatct cagacacttt cgacacactt ataaaaaaat caaagctcgt gagcgagatc
     2101 ggagaaaaag atcgccagct ttttttcgaa acgatgcgtc agcgcataca tgataagaag
     2161 aaattgatat gatcagccac gcctttctat ttcttttttg cccgtgttct tgccgctttc
     2221 ctggccgcgt gcgaacgctc tttaggtcct tttgttcgtg ctgctttctt tgctgctttt
     2281 gatctgtctg atgcgctacg ctgtttcgcc gctgacctac cttgctttga aagggcctgg
     2341 gacgaaacgg tgcccgtcgg ttcttttttc agcgcgtttc ttctcgctct ggatcttgtc
     2401 tgagacacgg gctttcctgc tcgttcttca tcctgtttgg ctttcttttt taattcagcc
     2461 cctccgcttt ttggcggcgg cagttttacg cctgcgcgtc ttgcttcaga caatcctatc
     2521 gcgatcgcct gtttggtgtt tcttgcacca tgctctcccc gtcttatctt ttcaatttcg
     2581 tcgtgcacaa attcgccggc ctgtgtgctg ggagacttgc cttcggcggc atctttcttt
     2641 gctttgtcga tcgtttgttt gtcgggcata agtgaagatt ttatattgga taatgcacca
     2701 acttgcgtgc catcacacaa ccttaccacg tcgtaatggc atcccatgtt aaagttcgat
     2761 cgaataatat atctgcattg atcaattcac tttagcgttc ctaaagccat ccataacttt
     2821 tcaaaaaagc aatgaggcgc ggatcatcga ccgacagtgc cggaagccag ttgctcactt
     2881 tttcacgggt ccaccacaag ccgtgtgtgt tacccggctt tgcaaatgag tagtgatata
     2941 gcactgcgcg aatatagcga ggcggtgttg ctgggaacgg gttaccagca aataaactca
     3001 atgttttggg atcgttatgg aggagcttcc attcgaggtt tagcgtccat ggatactcag
     3061 ccggcgtgta cattgaggca aaccacattt gccaatccaa tcgcaattga tagggtgcga
     3121 tttgcggcgg cattttatcg agcaaaacag gcagtccctt atag
//
LOCUS       DASQJI010000563         4704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1760265,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000563 DASQJI010000000
VERSION     DASQJI010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4704
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1760265"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..881)
                     /locus_tag="VEV83_15260"
     CDS             complement(231..881)
                     /locus_tag="VEV83_15260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK46533.1"
                     /translation="MHRKQIFTGGKDISEAKKVLVMLHGRGAFAEDILSLAGYFRLND
                     YALIAPQATNNTWYPLSFLAPPQQNEPWLSSALDLLSEVVSDINEKGIVSEHIYFLGF
                     SQGACLTLEFVTRNARKWGGVVAFTGGLIGDNIYTQNYRGDFAGTSVFIGTSDPDPHV
                     PVERVHATTQILKQMGADVTEKVYPDMGHTISQDEIRIANELIFTQQSNLNKKIQV"
     gene            complement(883..1836)
                     /locus_tag="VEV83_15265"
     CDS             complement(883..1836)
                     /locus_tag="VEV83_15265"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK46534.1"
                     /translation="MAQLVTGIHHVTALAGDAQKNIDFYAGILGLRLIKKTVNFDAPE
                     VYHFYYGDEVGTPGSILTFFPYGDIMSGRHGKGMLNTTSFSVPASSLAYWEQRLKKFD
                     IKFKEAQERFDSEAVIYFEDHDGLGLELVFNDKDSRAPFSYGNIPLESSIRGFYNVEI
                     WEEGYERTAALLTEQMDHKLIAEKSNRFRFAANDSPGNYVDIVCMPDALKGLGGNGTV
                     HHIAFATPDGKSQEEVRAKIVERMLNPTPVMDRQYFTSIYFREPGGVLFEVATAGPGF
                     AIDEEKAHLGEGLKIPPWYEKHRSTIEQAVTPVTFNLERFK"
     gene            complement(1893..2354)
                     /locus_tag="VEV83_15270"
     CDS             complement(1893..2354)
                     /locus_tag="VEV83_15270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HYK46535.1"
                     /translation="MAIDRFTIRVYGVLLDETQRVLLSDEFIRGDYFTKFPGGGMEFG
                     EGTRDCLKREFKEETGLDVVVGEHIYTTDYYQQSAFNPNDQIMSIYYFVHAENTSDLA
                     VKTKVFDFELHQISDPKGQSEVLRWVEWNDLNEDSVSLPIDKIVVRMLKSK"
     gene            complement(2565..3587)
                     /gene="fbp"
                     /locus_tag="VEV83_15275"
     CDS             complement(2565..3587)
                     /gene="fbp"
                     /locus_tag="VEV83_15275"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HYK46536.1"
                     /translation="MAVNRRVLTLDEFTIQAIRHLPKATGELSALLRDIGLAAKRIHV
                     EVNKIGLVDMLGDAGTVNIQGEDVKKMDVFANNQMIGVLKHGISCAGIGSEEMDDVVV
                     FDDEMSNQSKYVVMFDPLDGSANIDTNISIGTIFGVYRRKSKPGQPCNLGDFLQPGIA
                     QIAAGYIVYGSSTMLVYATRRGANGFTLDPAIGEFCLSHPDIQCPASGKIYSVNHGNF
                     FKYEKPVQDYITCCQKKTADTGGPYTNRYIGSMVADVHRTLIKGGIFMYPGTTGKPAG
                     KLRLMYECNPFAFIVEVAGGKATNGVQRILDIQPEHLHQRTPIFIGSENMVQECLSYL
                     KTEERE"
     gene            3761..>4704
                     /locus_tag="VEV83_15280"
     CDS             3761..>4704
                     /locus_tag="VEV83_15280"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HYK46537.1"
                     /translation="MKVFKFGGASVNSVERIKKVKEILSLYKGHQLVVIISAMGKTTN
                     ALEKVVENFYAGNNDEALKLFDIIKQQHLTTAKYLLVTHYNSCVEQLNNFFTEVEWLL
                     HDKPAREFDYYYDQVVCVGELLSTGIISHYLSEEGMQNTWLDVRDIIRTDDNFRDANI
                     DWQITEQKLRSVIGARGIAHPTSDIILTQGFIGATDENESTTLGREGSDYTAAVFANL
                     LNAESQTIWKDVEGVMSADPKHFQDAQFIPELSFDEVIEMAYYGAQVIHPKTIKPLEN
                     KGIPLHVKCFFDPSLPGTVISKKMSQRLPPIVIIKEKQA"
BASE COUNT         1268 a         1058 c         1040 g         1338 t
ORIGIN      
        1 tcgttttgtt ggtgctcgtt gcgtttgtcg tcttgactgg tgtttttaca tctttcgagc
       61 aactgccggc aaatatgatc aagccggcgc aaacgaaact gtgtagaatt atttttttca
      121 tcaggtaaaa tttttgaatt atagatgcct gtccggctaa gacagaattt aactaacctt
      181 tcaaaaagca attaagatca aagtttaaga aaaaattgct gatattttga tcaaacctga
      241 atttttttat tcaggttgct ttgctgggta aaaattagtt cgttggcaat ccttatttca
      301 tcctggctga tggtatggcc catgtctgga taaactttct ccgttacgtc tgcacccatc
      361 tgtttcagta tctgggttgt ggcatgaacc cgctctactg gcacatgcgg gtcagggtcg
      421 ctggtaccga tgaagacact ggtgccggca aagtcaccgc ggtagttttg cgtatagatg
      481 ttatcgccga tcagtccgcc cgtaaaagcg acgacgcctc cccatttcct tgcgttacgg
      541 gttacaaatt ccaacgtgag gcacgctccc tgagaaaacc ccaggaaata aatatgctcc
      601 gacacaatgc ccttctcatt aatatctgaa actacttcac tcaagagatc tagggcggat
      661 gacagccacg gttcgttttg ctgcggcggt gcaagaaatg aaagtgggta ccatgtgtta
      721 ttcgtcgcct gcggtgcgat caacgcataa tcattaaggc ggaaatagcc agctaatgaa
      781 aggatgtctt cggcgaatgc accccggcca tgtaacatca ccagcacctt tttcgcttca
      841 gagatatctt ttccgccggt aaaaatttgt tttcgatgca tcttatttaa atctctcaag
      901 gttaaacgta accggcgtta cagcttgttc aatcgtggaa cgatgttttt cataccacgg
      961 tggaattttc aggccttcgc ctaagtgggc cttctcttca tcaattgcaa agccggggcc
     1021 cgccgtggca acttcaaaaa gcactccacc aggttcgcga aaatatatcg aagtgaaata
     1081 ttgccggtcc atcactggtg taggattcaa cattctctca acgatctttg cgcgtacttc
     1141 ttcctgtgat tttccatccg gtgtggcgaa tgcgatatga tgtacggtgc catttccgcc
     1201 caggcctttc aaagcatcag gcatgcagac aatatctaca taattaccgg gagaatcgtt
     1261 tgctgcaaaa cgaaaacgat tgcttttttc tgcgatgagt ttgtggtcca tctgttctgt
     1321 tagtagtgcg gctgtacgtt catacccttc ttcccaaatc tccacgttgt aaaatccgcg
     1381 aatagaactt tccagcggaa tatttccgta agaaaacgga gcgcggctat ctttatcatt
     1441 aaacactaac tcgaggccaa gcccgtcgtg gtcttcaaaa tagatcactg cttcgctatc
     1501 gaatctttcc tgtgcttctt taaattttat gtcaaacttc tttaaacgtt gttcccaata
     1561 agccaaagat gaagccggaa ctgagaagga cgttgtattc agcatacctt ttccgtggcg
     1621 gccgctcatg atatcgccat atggaaaaaa agtcagaatg ctacccggtg tacctacttc
     1681 atccccgtaa taaaaatgat acacttccgg cgcgtcgaag ttcaccgttt tcttgataag
     1741 acgcaagccc agaatgcctg cgtaaaagtc gatatttttt tgtgcatcac ccgcgagcgc
     1801 ggtaacgtgg tggatgcctg tgaccaattg tgccatggat taaagttaat tagttaattg
     1861 gtttaaaagt tattcacgaa agtgtaatgg gctcatttgc ttttcaacat gcgcacgaca
     1921 attttatcaa tgggcaaaga cacagaatct tcattaagat cattccattc tacccatcga
     1981 agcacttcgc tttgaccctt cggatcagag atttgatgta attcaaaatc gaagactttg
     2041 gttttgactg cgaggtcact tgtgttttca gcgtgaacga aataataaat tgacatgatc
     2101 tggtcgtttg gattaaatgc cgactgctga taataatctg tagtgtagat atgctcgccg
     2161 actacaacat ccaagccggt ttcttcttta aattctcttt tcaaacagtc tcttgtgcct
     2221 tcgccgaatt ccatgccccc gccgggaaat ttagtaaaat aatctccgcg aataaattcg
     2281 tcactcaaca aaactcgttg cgtctcgtca agcaaaactc catatacgcg aatcgtaaaa
     2341 cggtcaatag ccatttgtga attgtgaatt gtgaatggcg aatatcaatc ccgaatgttc
     2401 gatctgcaaa ctccactccg aaatcccaaa tgctaaatct caaatcgcaa atcgtgaaac
     2461 gcggatggat ctgttccatc ggctagttcg ccttcagcgt cccaagcgta cgtatagatt
     2521 ccactgctaa atcgtaaatt gtaaatcgta aatcgtaaat tgcttcactc tctttcctcc
     2581 gttttcaaat acgacaaaca ttcctgcacc atattttcac tgccgatgaa gattggggtg
     2641 cgctgatgta aatgttccgg ttgaatgtcg agaattcgtt ggacgccatt cgtcgctttt
     2701 cctcccgcaa cttcaacgat aaatgcaaaa ggattgcact catacatgag ccgcaacttg
     2761 ccggctggtt tgcctgtagt gccaggatac ataaagatgc cacctttgat caatgtgcga
     2821 tgcacgtcgg caaccatgct tccaatatac cggtttgtgt atggcccgcc cgtgtcagca
     2881 gtttttttct gacaacaagt aatgtaatcc tgcaccggtt tttcatattt gaaaaagttt
     2941 ccgtgattga ctgaatagat ttttccgctg gccggacact gtatgtccgg gtggctcaga
     3001 caaaactcac cgatcgcagg gtcaagcgta aagccgtttg cgccgcgtcg ggttgcatac
     3061 acgagcatgg tcgatgatcc gtaaacaata tatcctgcgg caatttgtgc gattcccggt
     3121 tgtaaaaaat cgccgaggtt gcacggttga cctggtttgc tcttcctccg ataaacaccg
     3181 aatatcgttc caattgaaat atttgtatcg atgttggcgc tgccatcaag cgggtcgaac
     3241 attactacgt atttgctttg attactcatt tcatcatcga acacaactac gtcatccatt
     3301 tcctcacttc caatacctgc gcaactgatg ccatgtttta aaacgccgat catctggttg
     3361 ttggcgaaca cgtccatttt ctttacgtct tcgccttgaa tgttcactgt gcctgcgtct
     3421 ccaagcatat cgacaaggcc tatcttgttt acctcaacat gaattcgctt tgccgcaagg
     3481 ccaatgtcgc gcagcaaggc actcagttcg ccggtagctt ttggtaaatg gcggatagcc
     3541 tggatcgtaa attcatctaa ggtcaggacg cgacggttaa cagccatgtg caaatcgttt
     3601 gaagaaatgc aaatgtaatg gtgaatgggt gaatagtgtc gtgagttgtg ggtgcatcac
     3661 tgacggtgat tgctgaatgc ttgcattgca agcaatgaca ttgaatgagc actaactgtt
     3721 aagctccgat tatctttgtg cgatttttaa aaaaagatat atgaaggttt ttaagtttgg
     3781 cggcgcgagt gtgaacagcg tggaacgaat aaagaaggta aaagaaattc tttccctcta
     3841 taaagggcac caactcgtcg ttatcatttc tgcaatggga aagacgacga atgcgctcga
     3901 aaaggtggtc gaaaatttct atgcaggcaa taacgacgaa gcgctcaaat tatttgacat
     3961 catcaaacag caacatctca cgacggcgaa gtacctgttg gtcacacatt acaattcctg
     4021 tgttgagcag ctcaataatt ttttcacgga agtcgaatgg ttattgcatg ataaacctgc
     4081 ccgcgaattt gattattatt atgaccaggt cgtttgtgtc ggagaattgt tgagcacagg
     4141 catcatcagt cattacctca gtgaagaggg aatgcaaaac acctggctcg acgttaggga
     4201 catcattcgt acggatgata attttcggga tgcgaatatt gactggcaga tcacggagca
     4261 gaaattaaga tccgtgattg gcgcacgagg tatcgcacat ccgacgtcag acattatttt
     4321 gactcagggt ttcatcggag ctacagacga aaatgaaagt actacactag ggcgagaggg
     4381 aagcgattat acggcagcgg tgtttgcaaa cttgttgaat gcggaaagcc aaactatatg
     4441 gaaagatgtg gaaggtgtaa tgagcgcaga tcctaaacac tttcaggacg cacagtttat
     4501 accggagttg agttttgacg aggttatcga gatggcatat tatggtgccc aggtcattca
     4561 tcctaaaacg atcaagccgc tggagaacaa gggaattccg ctgcacgtga aatgcttttt
     4621 cgatccatcg ttgccgggaa cagtgatatc aaagaaaatg tcgcaacgtt tgccgccgat
     4681 tgttatcatc aaggaaaaac aagc
//
LOCUS       DASQJI010000564        11037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2834620,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000564 DASQJI010000000
VERSION     DASQJI010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11037
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2834620"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /gene="leuB"
                     /locus_tag="VEV83_15285"
     CDS             complement(<1..1149)
                     /gene="leuB"
                     /locus_tag="VEV83_15285"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HYK46538.1"
                     /translation="MSWSANKYFAANIGAGHVGKHYNIAVIEGDGIGPEVTRQAVKVL
                     NAIGAQFHHEFSYKYCLMGAIAIDQTGDPLPDKTIETCLRSDAILFGAIGHPKYDNDP
                     TAKVRPEQGLLKLRKSLQLFANIRPVMAYPALQHLSPLKAQQLQNVDMVIFRELTGGI
                     YFGKKELTDDGSKARDECVYSKDEITRIAHLAFQQAQKRKNKVTLVDKANVLETSRLW
                     RKVVQELGKEYRDVQLDFLFVDNAAMQIILNPAQFDVILTENMFGDIISDEASVISGS
                     LGLLPSASIGGHSALFEPIHGSYPQAAGKDIANPLGSILSAAMMLDHFQLQKEANIVR
                     EAVNWTLTNGFVTKDIEPVNFYFTSTVGDLISDYIRSTDHERVNLENIQ"
     gene            complement(1130..1726)
                     /gene="leuD"
                     /locus_tag="VEV83_15290"
     CDS             complement(1130..1726)
                     /gene="leuD"
                     /locus_tag="VEV83_15290"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HYK46539.1"
                     /translation="MSKGINIIQSSVVPLNIENIDTDQIIPARFLKATSREGFGKNLF
                     RDWRYENNDESKPKNDFPLNDNHYSGKILVAAKNFGCGSSREHAAWAIKDFGFDVVVS
                     SFFADIFKNNALNNFLLPVQVSDEFLQKIFAAVEQDAATEIEVNLEDQYIRIPSTNEQ
                     EPFDISPYKKTCLLNGYDDIDYLLSMKTEIEEYELERK"
     gene            complement(1723..2475)
                     /locus_tag="VEV83_15295"
     CDS             complement(1723..2475)
                     /locus_tag="VEV83_15295"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYK46540.1"
                     /translation="MNWNATLYDQKHSFVAKYGEDLLGWLDAQEGENVLDIGCGTGTL
                     TAKISEAGANVVGIDASPEMITKAKSAFPHIQFFLKDATDFSFREHFDAAFSNATFHW
                     IKEQRKAIQCIYNNLRAGGRFVYEMGAKHNIENIHNALKKVLADEGFEENTRMELNYF
                     SSPADQAVLLEDAGFIIAKIIRFERPTELSGEDGMKSWIIQFCHPFFNNIPHKKAADI
                     IDQSVSILKGTNYENGKWYADYIRLRIKAIKK"
     gene            complement(2475..3932)
                     /gene="leuC"
                     /locus_tag="VEV83_15300"
     CDS             complement(2475..3932)
                     /gene="leuC"
                     /locus_tag="VEV83_15300"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HYK46541.1"
                     /translation="MNKQNIHNETQPSPLGHAGMSLTLFDKIWNKHVVKQIEGGPSII
                     YIDKHFIHEVTSPQAFKGLEKRGLKVFRPQQVVATADHNVPTIDQHLPILEELSRKQV
                     QTLKENCEKFGIELYGLGHPFQGIVHVIGPELGITQPGMTIVCGDSHTSTHGAFGTIA
                     FGIGTSEVEMVLATQCLMQTKPKLMRINIDGELNKGVVSKDIILYIISLISASGATGY
                     AVEYAGSAIRNLSMEARMTICNMSIEMGARCGMIAPDETTFEYLKGRKFAPHGEEWDN
                     AVSYWKTLHSDTNATFDKELFIKAGDIEPMITYGTNPGMGVGISGHVPSLAEVDEKEK
                     PSFQKSLHYMGLEPGAKMKGRKVDYVFIGSCTNSRIEDLRMVASFVRGKQKANNVEVW
                     VVPGSKQVEKQAIEEGINKIFEEAGFTLRQPGCSACLGMNEDKIPAGKYCISTSNRNF
                     EGRQGPNARTFLASPLTAAAAAITGEVSDIREFMS"
     gene            complement(3976..5151)
                     /locus_tag="VEV83_15305"
     CDS             complement(3976..5151)
                     /locus_tag="VEV83_15305"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HYK46542.1"
                     /translation="MHTKKINIFDTTLRDGEQVPGCKLNTKEKIELALALEELGVDII
                     EAGFPISSPGDFASVEEIAKVIKNATVCGLSRAVEKDIEAAGEALKYANHARIHTGIG
                     TSDLHIKAKFKSTREEILERAIQCVKWAKSYVDDVEFYAEDAGRTNNDYLARVVEAVI
                     NAGATVVNIPDTTGYCLPHQYGEKIAFLINNVPNIDKATISCHCHNDLGLATANSIAG
                     VIAGAGQIECTINGLGERAGNTSLEEVVMVMKQHSYLGFYTNIRTEQLNPLSRLVSDI
                     MRMPVQPNKAIVGSNAFAHSSGIHQDGFLKDNSTYEIIRPEEVGAEGSKIVLTARSGR
                     SALAYRFQKLGYQYNRNDIDFLYAEFLKLADCKKEITDEDLHVIATSFHPEISYNFS"
     gene            5353..6918
                     /locus_tag="VEV83_15310"
     CDS             5353..6918
                     /locus_tag="VEV83_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46543.1"
                     /translation="MPNRSTDELFQLIKSLDKSEKRLFKLHVKRVSGSDDLKIIALFD
                     ALDGMPEYDEEKLFRKSRSIQKPQLSNMKAYLYKQILSSLSYSSSDVESQLSEQLLYA
                     RLLYNKGLYLQALKLLDKVKGIAKNFNQSTYRLQALIFEQKIEAMHITRSMEGRAEQL
                     AKESNEVNRRVSLLGRLSGFALQLYSWYIQHGHARDEKDEKAVHEFFYAHLPACQVSA
                     MDFYERLYYYQAYCWYTFIRQDLLGYYRYSQKWVDLFEENLQMKHVESLQYVKGIHNL
                     LSAHFVLLNYRRFEESVQLFEDFAASEAGHKDDNTRIQTFIYLQIARLNRHFMEGTFT
                     KGLSLVPVIEEKIEDYKLHIDTHRVLIFYYKIACLYFGSGDNEKAVEYLNLIINRKPD
                     LRTDLHCYARLLHLIAHYELGNYQLVEYLIKSVYRFMAKMKNLNVVEEEIFLFLRRSF
                     SLSPSEIFAAFKPLKEKLEKLQGNPVATRSFMYLDIIGWLESKIEDVPVQQIIRNRYL
                     SSKKNRQPVKSFS"
     gene            complement(6911..7150)
                     /locus_tag="VEV83_15315"
     CDS             complement(6911..7150)
                     /locus_tag="VEV83_15315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46544.1"
                     /translation="MERELLITVRKNKYDGEKINREIECIKNLFPYLESFETFSTSNQ
                     IFDLEKHKVIDTKNRLRHIFDEGVQKNNSFIVSLN"
     gene            complement(7264..9171)
                     /locus_tag="VEV83_15320"
     CDS             complement(7264..9171)
                     /locus_tag="VEV83_15320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYK46545.1"
                     /translation="MKYVLLISVLVTEFLQAQTYDPEKVNKKATDTYAKAIELLQNDA
                     RREVIPVLKQAIQYDDRFVDAYLSLGGVYGELKDYANSVANYEKALSIDSAYSRFYLL
                     PYSINLAGMGRFDDALHAVNNFLSIPNLNDKSRKSATYRKSCYEFAVQYASTHSNSNY
                     DFAPANLGDNINSPESEYYPSFTIDDSILVFTRRGEGIREDFVESILTPTGYSKAEVI
                     KGDINVEPSKGGINISQDGEWLLFAGNFAGKGFGDFDLYISYDTPTGWSEPIDLGGNI
                     NTEFWESSPSLSPDKNALYFSSNRPGGYGGKDLYVSYRLPNGKWSPAENMGSEVNTAG
                     DEIAPFIHADNRTLYYTSNGLPGYGGTDIYMMRRVAEKKWSKPEDLGYPINTIENEGS
                     LFVASDGMTAYYASDRSDTKGFLDLYKFTLRPEARPVKTLYVKGYVKDSETEKGLPCA
                     VELSADSSQELLSRVQTDETGFYFITLPVGKNYTFTVNRKGYLFYSDVFPLADKPGDS
                     VYVKDISLQPIELNASVTMKNIQFPVNSFELEPVSVIELNKLIQLMNDNPSIHIQIKG
                     HTDNTGTEADNLKLSDNRAKAVVDFLVSKGVDAKRLSWKGFGETQPLTSNSTEEGKAI
                     NRRTEFVITGL"
     gene            complement(9237..9773)
                     /locus_tag="VEV83_15325"
     CDS             complement(9237..9773)
                     /locus_tag="VEV83_15325"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYK46546.1"
                     /translation="MLSVREMTLTDVAAIVNYWHERDHDFLISMGVDVAKLPTREDLT
                     HLLAEHLNTPLEKRRSYCLIWQVNGEPIGHCNTNPTTFGEEAFMHLHIWNMDTRRRGL
                     GTAFVKMSLPYFFRNLQLKKLFCQPYALNDAPNKTLAKAGFDFVKEYVTVPGFLNFEQ
                     PVKQWQLTREKFERLNAS"
     gene            9911..10609
                     /locus_tag="VEV83_15330"
     CDS             9911..10609
                     /locus_tag="VEV83_15330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HYK46547.1"
                     /translation="MNKVFSNADEAIFDIPENATIMFGGFGLCGIPENLIDALRRKGV
                     KGLSCISNNAGIDDFGLGLLLNNGQIKKMTSSYVGENAEFERRLLSGELEVDLIPQGT
                     LATRIQMRGMGIPAFFTPAGYGTEVAEGKDIREFDGKKHLMEYALKADFACVKAWKGD
                     TLGNLVFRKTTRNFSTSMAKAGDITIAEVEQLVEPGELDPDQIHVAGIYVHRIFQGSN
                     YVKRIERRTIRIER"
     gene            10682..>11037
                     /locus_tag="VEV83_15335"
     CDS             10682..>11037
                     /locus_tag="VEV83_15335"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HYK46548.1"
                     /translation="MPLDKYGIAKRIAQELQDGMYVNLGIGIPTLVANFIPHGMTVIL
                     QSENGILGIGPYPTDEEIDPDLINAGKETVTTVKGSAFFDSAESFGMIRAGKIDLTVL
                     GAMEVSEKGDIANWKIP"
BASE COUNT         2967 a         2477 c         2312 g         3281 t
ORIGIN      
        1 ctgtatattt tcaaggttca ctctttcatg atctgttgat ctgatgtaat cactgatcag
       61 gtcgccgacc gttgatgtga aataaaaatt gaccggctcg atatcctttg taacaaagcc
      121 atttgtcaat gtccaattta ctgcttcgcg aacgatgttc gcttccttct gcaactggaa
      181 atgatccagc atcatggcgg ctgataaaat agagccaaga ggattcgcaa tatcttttcc
      241 tgcggcctgt ggataagaac catgtattgg ttcgaacaat gcagaatgtc cgccgataga
      301 agcggagggc agcaagccca aagagccgct gatcacgctt gcctcgtcgc tgataatatc
      361 gccaaacata ttttcggtca gtatcacgtc aaactgcgca ggattgagaa tgatctgcat
      421 ggcagcgttg tcgacgaata aaaaatcaag ctgcacatct ctatactcct tcccgagttc
      481 ctgcacaact ttcctccaca gccttgacgt ttccaaaaca tttgctttat cgaccagcgt
      541 tactttgttt tttcttttct gcgcttgttg aaaggcaaga tgagcgatcc ttgtaatctc
      601 gtctttcgaa taaacgcatt catccctcgc cttcgagccg tcgtcggtca attctttctt
      661 gccgaaataa attccaccgg taagttcccg gaagattacc atgtcaacat tttgcaattg
      721 ctgtgctttc aaaggagata gatgctgaag ggccgggtac gccattacag gacgaatgtt
      781 tgcaaacaac tgtaaagact ttctcagctt tagtaaacct tgctcgggcc gaacctttgc
      841 ggtgggatcg ttgtcgtatt tcggatgccc aattgcacca aatagtatgg cgtcgctacg
      901 taaacaggtt tcaatagttt tatccggcag cggatcaccg gtttgatcaa tagcgatcgc
      961 gcccatcagg caatacttgt atgaaaattc gtgatggaat tgcgcaccga tagcattcaa
     1021 aacttttacg gcttgtctcg ttacttcagg gccgatccca tccccttcaa taaccgcaat
     1081 gttataatgt ttgcccacgt ggccggcacc aatgtttgca gcgaaatatt tatttgcgct
     1141 ccagctcata ttcctcgatt tcagttttca tacttaataa ataatcaatg tcgtcgtagc
     1201 catttaataa acaggttttc ttgtaaggac ttatatcaaa tggctcctgc tcatttgttg
     1261 aggggatcct tatatactga tcctccaggt tcacttcgat ctccgttgca gcatcctgtt
     1321 ctacagccgc aaaaattttt tgcagaaatt cgtcgcttac ctgcaccggc aacagaaaat
     1381 tattcagggc attgttctta aagatgtccg cgaagaaact gcttactaca acatcaaaac
     1441 caaagtcctt aattgcccag gccgcatgtt ctcttgaaga gccacagccg aaattttttg
     1501 cggcaaccaa aatttttcct gagtaatggt tgtcgttcaa tggaaaatcg ttttttggtt
     1561 ttgattcatc attattttca tagcgccagt cgcgaaataa attttttccg aatccttcgc
     1621 ggcttgttgc ttttagaaag cgagccggaa ttatttgatc ggtatcgatg ttctcaatat
     1681 ttaatggaac aaccgatgat tgtatgatgt ttattccttt gctcattttt tgatcgcttt
     1741 tattcttaac cgtatatagt ccgcatacca tttgccgttc tcataatttg ttcctttcaa
     1801 aatggaaaca gattgatcaa taatatccgc agccttttta tgagggatgt tattaaagaa
     1861 cggatggcag aattgtatga tccagctctt cattccatct tcgccgctca attcggtggg
     1921 tcgttcaaac cggataattt ttgcaatgat gaaaccggcg tcttctaaaa gcacagcttg
     1981 gtcagcgggt gaagaaaaat agtttagttc cattcgtgta ttctcttcga atccttcatc
     2041 cgccaagact ttttttagcg cgttgtggat gttttcaatg ttgtgttttg cacccatttc
     2101 ataaacaaac cttccacctg ctcttaagtt attataaatg cattgtatcg ccttgcgttg
     2161 ctctttgatc caatgaaatg tggcatttga aaacgcagca tcaaaatgtt ctctgaaaga
     2221 aaaatcagtc gcgtccttta aaaaaaactg aatgtgagga aatgctgatt ttgcttttgt
     2281 gatcatttca ggtgaagcat ctattccaac cacgtttgca ccggcttcac tgatcttcgc
     2341 cgttaacgtt cctgtcccac aacctatgtc caatacattt tctccctcct gtgcatccaa
     2401 ccagccaagc aaatcttcgc cgtactttgc aacgaaactg tgtttttgat catatagtgt
     2461 ggcgttccag ttcatcacga cataaattct cttatatcag aaacttcgcc ggtaattgct
     2521 gccgccgctg cggttaacgg gcttgctaaa aatgttcttg cattcggacc ctgtcttcct
     2581 tcaaaatttc ggttggaggt ggagatgcaa tattttcctg ccgggatttt atcctcattc
     2641 atccccaaac atgctgagca cccgggttgt cgcaacgtaa aaccagcttc ctcaaatatt
     2701 ttgttgatgc cttcttcaat ggcctgtttt tccacttgtt tactgccggg cacaacccaa
     2761 acttcaacat tgttcgcctt ctgctttcct cttacgaatg atgcgaccat gcgcaaatct
     2821 tcgatacgac tatttgtgca actgccgata aaaacataat ctacctttct tcccttcatt
     2881 tttgcacccg gttcaaggcc catgtaatgc agtgattttt gaaaagatgg tttttctttt
     2941 tcatcaacct cagccagtga gggcacatga ccagaaatcc caacacccat cccgggattt
     3001 gtgccatacg tgatcattgg ctcaatatct ccggctttaa taaaaagttc tttatcaaat
     3061 gttgcattcg tgtcactgtg taacgttttc cagtaactaa ctgcgttatc ccattcttca
     3121 ccgtgcggag caaattttct tcctttaaga tactcgaatg tcgtttcatc cggagcgatc
     3181 attccgcagc gcgcgcccat ttcaatgctc atattgcaaa tggtcatgcg cgcttccatc
     3241 gataaattac gaatcgctga acccgcatac tcaaccgcat aacccgttgc accacttgct
     3301 gagatcagcg agatgatata aagaatgatg tctttcgata caacaccttt atttagttcg
     3361 ccgtcgatat taatgcgcat gagctttggt ttcgtctgca tcaggcattg ggttgccaaa
     3421 accatttcca cttcactcgt tcctatgcca aacgcgatcg ttccaaacgc cccatgggtg
     3481 gatgtgtggc tgtcgccgca aacaatcgtc atcccaggct gcgtgatccc aagctcaggt
     3541 ccgataacat gcacaatgcc ctggaaaggg tgaccgaggc catataactc tataccaaac
     3601 ttttcgcagt tctctttcaa tgtttgaact tgttttcgcg aaagctcttc cagtatgggc
     3661 aagtgttgat caatagtcgg cacattgtga tccgcggttg caacaacctg ctgtggacga
     3721 aaaactttga gccctctttt ttcaagccct ttgaatgcct gcgggctggt tacttcatga
     3781 atgaaatgct tatcgatgta tattatagat gggccgcctt cgatctgctt gactacatgt
     3841 ttattccaaa ttttatcgaa gagcgttaaa ctcatacccg catggcccaa aggggagggt
     3901 tgagtttcgt tatgtatatt ttgtttgttc atttaatcta tcaactgaaa ttgacttgca
     3961 actgttctaa ctgctctagg aaaaattata agatatttcc ggatgaaaac ttgttgcaat
     4021 cacgtgcaga tcttcgtcgg taatttcttt tttgcaatca gcgagtttta aaaactcagc
     4081 atatagaaaa tctatatcgt ttcgattgta ttgataaccg agtttttgaa accggtatgc
     4141 aagagcggaa cgaccactgc gggcggtgag cactatctta gaaccctctg ctcccacttc
     4201 ctccggtcgt atgatttcat aagtggagtt atcttttaag aatccatcct ggtgaatacc
     4261 gcttgaatgc gcaaatgcat tgctgccaac gatcgcctta tttggctgaa ccggcatacg
     4321 catgatatca ctcacaagcc tgctcaatgg attaagttgt tccgtcctga tgtttgtgta
     4381 gaaaccaagg tagctgtgct gcttcatcac catcaccact tcttcaagcg aagtattccc
     4441 agcccgttcg ccaaggccat tgatcgtgca ttcgatttgt cctgcgccgg cgatcactcc
     4501 tgcgatcgaa tttgcagttg cgagcccaag atcattatga caatggcagg agatagttgc
     4561 cttgtcgata ttcggtacat tgtttatgag aaaagcaatc ttttcaccgt attggtgcgg
     4621 caggcaatag cccgttgtat ccggaatatt gaccacagtt gcgcccgcat tgatgacggc
     4681 ttcaactaca cgcgcgagat aatcattgtt cgtgcggccc gcatcttcag cgtaaaactc
     4741 aacatcgtcc acatatgatt ttgcccactt aacgcactgt atagctcgtt cgaggatctc
     4801 ttcacgcgtt gacttgaatt ttgctttgat atgcaggtca gaagttccga taccggtatg
     4861 tatccgcgca tgatttgcat attttagcgc ttctccggcc gcctcaatat ccttttcgac
     4921 cgcacggctt aagccgcaga cagtagcatt tttgatcacc tttgcaatct cctcaaccga
     4981 cgcaaagtcg cccggactcg agatgggaaa tcctgcttca ataatgtcga cgccaagttc
     5041 ttccagcgcg agtgccagtt caatcttttc tttcgtgttc aatttgcaac ccggaacctg
     5101 ttccccatct ctgagcgtcg tgtcaaaaat gttaatcttt tttgtatgca tggcttttcg
     5161 attagataaa aaagcgccga ctgtttaaat ttgattccag ccagtgcgtg taaacagtct
     5221 gcgcaggtgg ataaaattac aaagccgtag ctgcgcggta aaatcaaatt gaagatcgtt
     5281 ctacgcttat aaacaagttg taaatttgtt aaaagccttt acagcaaagc gtttgagcaa
     5341 attttattta cgatgcccaa caggagtaca gacgagttat ttcaactgat aaaatcatta
     5401 gataaatcgg aaaagcgatt atttaagctg catgtaaaac gagtgtcagg cagcgacgat
     5461 ctcaagatca ttgcattgtt tgatgcgctc gatggcatgc cggagtacga tgaagagaaa
     5521 ctgttccgaa aaagtcggtc aatacaaaag ccgcagcttt caaacatgaa agcatacctg
     5581 tataagcaga tcctttcaag ccttagttac tcgtcaagtg atgttgaaag ccagctcagc
     5641 gagcagttgc tttatgcacg tttactttat aacaaaggcc tttacctgca ggcgttaaaa
     5701 cttttggata aggttaaagg catcgcaaaa aattttaacc aatctactta caggctacaa
     5761 gcgttgatat ttgagcaaaa gatcgaagct atgcatatca cgagaagcat ggaagggaga
     5821 gctgagcaac tggcaaaaga atccaatgaa gtgaacaggc gcgtgtcctt gcttggccgc
     5881 ctttccggtt ttgctttgca gttgtatagt tggtatattc agcacgggca tgccagggat
     5941 gaaaaagatg aaaaggcggt ccatgaattc ttttacgcgc atctacctgc ttgccaggtg
     6001 agcgcgatgg atttttacga aaggctgtac tattaccagg cgtactgttg gtacacgttc
     6061 atccgtcaag atctgctggg ctattaccga tactctcaaa aatgggtaga tctcttcgaa
     6121 gagaacttgc agatgaaaca tgttgagtca ttgcagtatg taaagggaat tcataacctg
     6181 ctttccgcgc attttgtgct acttaattac agaagatttg aagagtcggt tcaattgttc
     6241 gaagactttg ctgcgtcgga agccgggcac aaagacgata acacccggat ccaaacattc
     6301 atttacctgc agatcgcgag actaaatcgt cattttatgg aaggcacttt tacaaagggt
     6361 ttgtcattgg tgccggtcat tgaagaaaaa atcgaagatt acaaactcca catcgataca
     6421 cacagggttc taatttttta ctacaagatc gcgtgtttat attttggaag tggagataac
     6481 gaaaaagcgg tggaatattt aaatcttatt atcaaccgca agccggatct gcgcacggat
     6541 ctgcattgtt atgcgcgact tcttcacctg atcgcgcatt atgagctcgg aaattaccaa
     6601 ctcgttgaat acctgatcaa atccgtttac cgctttatgg cgaagatgaa aaatctcaat
     6661 gtcgtcgaag aggaaatctt cctgttctta agaaggtcgt tctcgttatc tccaagcgag
     6721 atattcgcag ctttcaaacc gcttaaggag aagctggaga aattgcaggg aaaccccgtg
     6781 gcaacccgat cttttatgta cctggatata ataggctggc ttgaaagtaa gatcgaggat
     6841 gttcctgttc agcagataat acggaacagg tatctttcgt cgaaaaaaaa tcgccagcct
     6901 gtaaagagtt ttagttgagg cttacgatga agctgttatt tttttgaaca ccttcgtcga
     6961 atatgtgtct cagccggttc tttgtatcga tcactttgtg tttttcaagg tcgaagatct
     7021 gattgctggt gctaaaagtt tcaaacgact ccaggtatgg gaataaattt ttaatacatt
     7081 caatttcacg attgattttt tccccatcgt acttattctt ccttactgtg attaataatt
     7141 cgcgttccat aatatccgtt ttaattatag tatggcaaga ataattccgt tttacttttc
     7201 atgccaaaat gctgcattcc ggcgaaatat ttcaaaatcc tgccgcaaat tgggaaagtt
     7261 tatttacaat cctgttatca caaattccgt cctgcggttg atcgcttttc cttcttctgt
     7321 ggaattggat gtaagtggtt gagtttcccc aaatcctttc cagcttaaac gttttgcatc
     7381 cacacctttg cttaccaaaa aatccactac agccttcgcc ctgttatcag ataattttaa
     7441 attatcagct tccgttcctg tattatctgt gtgccctttt atttgtatat ggatggatgg
     7501 attatcattc attaactgaa ttaatttatt caattcgatc acgctgacag gttcaagctc
     7561 aaatgaattg accgggaact gaatattttt catcgttaca gaagcattca attctatcgg
     7621 ttgcaacgaa atatctttta catatacgct atcgccgggt ttatctgcaa gcgggaatac
     7681 atcgctgtaa aaaagatacc cttttctgtt tacggtgaac gtataattct tgccgacagg
     7741 caatgtaata aaataaaatc ccgtttcgtc tgtttgtacc cgtgaaagca gttcctggct
     7801 tgaatcggcg ctcaactcta ccgcacaggg taatcctttt tctgtctcac tgtcttttac
     7861 ataacctttt acatataacg ttttcactgg ccgtgcctca ggccttagtg taaatttata
     7921 aaggtctaaa aagccttttg tgtctgaacg atcgctggca tagtatgcgg tcatgccatc
     7981 tgaggcaaca aataaactgc cttcgttttc gattgtgttg attggataac cgaggtcttc
     8041 aggcttgctc cactttttct cagcgacacg gcgcatcata tatatgtctg taccgccgta
     8101 tccgggtaag ccgttcgatg tataatacag tgttcgatta tccgcatgaa tgaatggagc
     8161 aatctcatca ccggcagtat tcacttcaga tcccatgttt tctgcaggtg accacttacc
     8221 atttggcagc cgatagctta cgtatagatc tttgccgccg tagcctccgg gcctgttgct
     8281 gctgaaataa agcgcgtttt tatccggact aagcgacgga gagctttccc aaaattcggt
     8341 attaatgttt cctccaagat caataggttc actccagccg gtcggcgtgt cgtaagaaat
     8401 gtacagatca aaatcaccaa aacctttgcc cgcaaagttg cccgcgaaca aaagccattc
     8461 gccatcctgc gaaatattaa ttccgccttt cgacggttca acatttatat cgcctttgat
     8521 tacttcggct ttagaataac cagttggagt gagaatgctt tcaacgaagt cctcacgaat
     8581 tccttcgcct ctccgtgtga aaacgagtat gctgtcatca atggtgaatg atggataata
     8641 ttctgattca ggggagttga tgttatcgcc gagattggcc ggcgcaaaat cgtaattgct
     8701 gttactgtgc gttgacgcat actgcacggc aaattcatag caactcttcc gatacgttgc
     8761 actcttccgg cttttatcat tcaagttcgg gatagaaaga aaattgttta cggcatgcaa
     8821 tgcatcatca aacctgccca tgccggcaag atttatcgaa tagggtaaca aatagaaccg
     8881 ggagtaggcg ctgtctatgg acaaagcctt ttcatagttt gcgacgctat ttgcataatc
     8941 ttttagttca ccatatacgc ctccaagcga gagatatgca tctacaaacc ggtcatcgta
     9001 ttgaatagct tgtttcaaaa cagggatcac ctcacggcgc gcatcatttt gcagcaactc
     9061 aattgctttt gcataagtat cagtagcttt tttattcact ttctccggat cgtaggtttg
     9121 cgcctggaga aattcggtta ccaaaacact gatcagcaaa acatacttca tgcctgtaaa
     9181 gttgcaaaca accgttgtaa gttgtgtttc tctaaagtta aaaatgagga cgtctgttat
     9241 gaagcattta gtcgctcgaa tttttcacgg gtcagttgcc attgtttaac cggttgctcg
     9301 aagttcaaaa agccaggcac tgtgacatat tccttaacaa agtcaaatcc ggcttttgcc
     9361 agcgttttgt tcggcgcatc gttcaatgca tacggctgac aaaataattt ttttagctga
     9421 aggtttctga aaaaataggg caagctcatt tttacgaacg cagttccgag cccgcgtcgc
     9481 cttgtgtcca tgttccaaat atgcagatgc atgaaggctt cttcaccaaa cgttgtcggg
     9541 ttagtattac aatggccgat cggttcaccg ttcacttgcc agataagaca gtacgatctt
     9601 cttttttcga ggggcgtgtt caaatgctct gccaggagat gcgttagatc ttcgcgggtt
     9661 ggaagtttcg cgacatctac tcccatgcta ataagaaagt cgtgatcgcg ctcatgccag
     9721 taattgacaa ttgcggcaac atctgtcaac gtcatttctc ttaccgaaag cataagtcaa
     9781 acttaaaaac taaaattcaa gatgattgaa gtttacacaa gtgccaggta ataaattgat
     9841 acggcaacac attttccaat tttcacatcg tcacattttc aaattatctt gcgcgtctaa
     9901 cgagctttcg atgaacaaag ttttttctaa tgcagacgaa gccatcttcg acattcctga
     9961 gaatgcaact ataatgttcg gaggtttcgg cctttgcggc atacccgaaa atttgattga
    10021 tgccttaagg agaaaaggcg tgaagggatt gagctgcatc tcgaataacg caggtatcga
    10081 tgacttcgga cttggcttgc ttcttaacaa cggccagata aaaaagatga cgagcagcta
    10141 tgtgggtgag aatgcagagt ttgaaaggcg attgttgtcg ggtgaacttg aagttgatct
    10201 aatcccccag ggtacactcg ctacgcggat tcaaatgaga gggatgggca tacctgcttt
    10261 tttcacgcca gccggctatg gaacggaagt agcggagggc aaagacatca gggagtttga
    10321 cgggaaaaaa catttaatgg aatatgcttt aaaggcagac tttgcatgtg taaaggcatg
    10381 gaaaggtgat acgctcggca atttggtgtt tagaaaaacc acgcgcaatt tttcaacttc
    10441 gatggcaaag gccggcgaca taacgatcgc tgaagttgag caactggtcg agcccggcga
    10501 acttgatcct gatcaaattc acgtggcagg aatatatgtg catcgcattt tccagggcag
    10561 caattatgtg aagcgcatag aaagaagaac aatacgaatt gagcggtaga aaatcgcgat
    10621 ctgaaatctg caatccccaa tcttcaaatt gtaaatcgta aatctgaaat tgtaaatcga
    10681 catgccttta gacaaatacg gaatcgcaaa acgaatcgcg caggaattac aagacggcat
    10741 gtatgtgaat ctcggcatcg gcataccaac cctggtagcc aatttcattc cgcatggcat
    10801 gaccgtgatc ctgcaaagcg agaacggaat tcttggaata ggtccttatc cgaccgacga
    10861 agaaatcgat ccggatctca tcaatgcggg aaaagaaacg gtgacaacgg tgaaaggaag
    10921 cgctttcttt gatagcgcag aaagttttgg gatgatccgc gcaggcaaga tcgatctcac
    10981 ggtacttggc gcgatggaag taagcgaaaa aggggacatt gccaattgga aaattcc
//
LOCUS       DASQJI010000565         3849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_70315,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000565 DASQJI010000000
VERSION     DASQJI010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70315"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VEV83_15340"
     CDS             <1..351
                     /locus_tag="VEV83_15340"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HYK46549.1"
                     /translation="SLPMLVLNGGLIRLAKNHAIDITSHDAKPSHNSTNGDTFSDRFR
                     KEKFQKCGAENLSFGEGEPLFLLTLLYLDIDVPGLGHRKTLLNAQYRETGIGAKNFKN
                     GSIFLVEDFACAQD"
     gene            388..2256
                     /gene="mnmG"
                     /locus_tag="VEV83_15345"
     CDS             388..2256
                     /gene="mnmG"
                     /locus_tag="VEV83_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HYK46550.1"
                     /translation="MFSEYDVIVIGAGHAGCEAAAAAANLGSRVLLITMNMQTIAQMS
                     CNPAMGGIAKGQIVREIDALGGYSGIVTDKSLLQFRMLNKSKGPAMWSPRAQNDRALF
                     AATWRTMLEQTPNVDFYQDTVKSLLIRDSLVYGVVTGLGHRIIAKSVVVTSGTFLNGV
                     IHIGEKSFGGGRISEKNSTGITEQLVEFGFESDRLKTGTPPRIDGRSLDYSRMEVQQG
                     DTEIEGFSYLDVEKISASNQRPCFITYTNKEVHETLKQGFDRSPMFCGRIDGVGPRYC
                     PSIEDKINRFADRDRHQIFVEPEGFNTVEIYVNGFSTSLPEEVQYEALRKMAGFESAK
                     MFRPGYAIEYDYFPPTQLKYSLETKLISNLFFAGQINGTTGYEEAACQGLMAGINAHQ
                     QVNDFEPFVLGRDEAYIGVLIDDLISKGTEEPYRMFTSRAEYRTLLRQDNADIRLTEK
                     SYRLGLASQERMAKVKAKTEAVNRIKSVLRTVMIDAEEINTYLDKIGSAKIDEKQRAV
                     KLLLRPDITIADFINNVPSLHAELSSYDAEVLQQAEIQLKYERYIEKEQDLVRRMSSM
                     ENTMIPDTFDYDRIAALSAEALQKFKRIKPRTLGQASRISGVNPSDVQILMVYMGR"
     gene            2325..3068
                     /locus_tag="VEV83_15350"
     CDS             2325..3068
                     /locus_tag="VEV83_15350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46551.1"
                     /translation="MKSIPLLLAFFSLFFSSTQAQTISGVVSDYFSKRPLDAVTIQTS
                     SGHHSISDSLGQYSISVTRADSIWFSYLNKQTMKYPVDTITHPVNFDVALYVDARWLP
                     EVKVRASDYRYDSIQNRLEYAKIFNFHKPGIKLSQSSRSTYVPGSLTVGFDLDEIINA
                     FRFKRNRQLLSFQQRLIQDEQDKYIDHRYSKYLVKKLTQLDGKELEDFMSIYRPSYEE
                     VLALNDLELGYYIELCYKNYAFLKARSKP"
     gene            complement(3070..>3849)
                     /locus_tag="VEV83_15355"
     CDS             complement(3070..>3849)
                     /locus_tag="VEV83_15355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYK46552.1"
                     /translation="SLVTTHVIEAPSLVSHFNLYRNIDILGQAKQGYSSGQALDALKE
                     VAAQSLPAGYGYDFAGLSREEVRAGSSTGVIFSVSIVFVFLFLAALYESWSIPFSVLF
                     AVPVGAFGAILTLTLLPNISNNVYAQIGLITLIGLSAKNAILIVEYAKERVDRGVDVV
                     HATLQAVSLRLRPIIMTSLAFIFGVLPLAFSTGAGAEARKTIGWTVFGGMVAATSLAI
                     FVVPVLFVLITKLAYGKQLARLQEEHQKEEQVDQALISRGR"
BASE COUNT         1106 a          886 c          891 g          966 t
ORIGIN      
        1 tcgttgccga tgcttgtgct aaatggcggc ctaatacggc tcgcaaagaa tcacgccatc
       61 gatattacgt cgcacgatgc aaagccttct cataattcca cgaacggcga tacattttcg
      121 gatcggtttc ggaaggaaaa gtttcaaaag tgcggcgccg agaatctaag cttcggagag
      181 ggcgagccat tgtttttact tacgcttctt taccttgaca tagatgtccc cgggcttggg
      241 cacagaaaaa cgttgttgaa cgcacagtac cgcgaaactg gcatcggcgc aaaaaatttc
      301 aaaaacggaa gcatttttct agtggaagat ttcgcctgtg cccaagatta gttccacgtg
      361 aaattttttg acaagtaatt ttgccgaatg ttttccgaat atgatgtaat cgttattggt
      421 gcgggccatg cgggctgcga agcggccgcc gccgcggcga atctggggag cagagttcta
      481 ttgatcacga tgaatatgca aaccattgcg caaatgagct gcaacccagc tatgggcggc
      541 attgctaaag gccagatagt tcgcgaaatt gatgctctgg gtggctatag cggtattgtc
      601 accgacaaaa gcttgctgca attcaggatg cttaacaaaa gcaaggggcc cgccatgtgg
      661 agtccacggg ctcaaaatga tcgagcctta ttcgcagcta cctggcgtac gatgttggaa
      721 caaactccca acgttgactt ttaccaggac acagttaaat cccttcttat tagagatagt
      781 ttagtttacg gagttgtaac aggacttggc caccggataa tagctaaatc ggtcgtcgta
      841 acaagcggaa cctttcttaa tggggtcata catattggag agaaaagttt cggtggagga
      901 cggatctcgg aaaaaaattc tactggcatc actgaacagc tagttgaatt cggttttgaa
      961 agcgatcgct tgaaaactgg cacgccaccg cgcatcgacg gcaggagcct ggattacagt
     1021 cgaatggaag ttcaacaagg ggacactgaa attgagggct tctcatattt ggatgttgaa
     1081 aaaatctctg cgtccaacca acgcccgtgc tttattacct acacaaacaa ggaagtgcac
     1141 gagactctta aacagggatt tgacagaagc cctatgtttt gcggccggat agatggagtc
     1201 ggtccgcgct actgtccaag cattgaagac aagatcaatc gatttgccga cagagatcga
     1261 caccagattt ttgtagagcc tgagggcttc aatacggttg agatctacgt caacggtttt
     1321 tcaacttccc ttcctgaaga agtccagtac gaagcgcttc gtaaaatggc gggttttgaa
     1381 tctgctaaga tgtttcgccc cggatatgcg atcgaatacg actattttcc accaacgcag
     1441 ttgaaatatt cactcgaaac aaagcttatt tccaatctat ttttcgcggg acaaataaat
     1501 ggcactaccg gctacgaaga agcggcttgc caggggctga tggctggcat caacgcgcat
     1561 caacaagtta acgattttga accgttcgtt ttaggaagag acgaggctta cattggtgtt
     1621 ttgatcgatg acctcattag caaaggcact gaagaacctt accgcatgtt cactagccgg
     1681 gccgaatacc gaacgctgct tcggcaagac aacgcggata tacgcttgac tgaaaaaagc
     1741 tatcgtcttg gattggcaag ccaggaaaga atggcgaagg tgaaggcgaa aaccgaggcg
     1801 gtcaaccgaa ttaagtcggt gttacgaacg gttatgatcg atgcagagga aataaatacg
     1861 tatctcgata aaattggttc agcgaaaatt gatgaaaaac aaagagcagt aaagcttttg
     1921 ttgcgacccg acataacgat agccgacttt attaataacg ttccctcctt gcacgctgaa
     1981 ctgtcttctt atgacgcgga ggtacttcaa caagctgaga tccaactaaa gtatgagcgt
     2041 tacatagaaa aagaacagga cctggtgcgg cgaatgtcga gcatggaaaa cacaatgatt
     2101 cccgatacgt tcgactacga tcgcatagcg gcattaagcg ccgaagcact tcaaaaattt
     2161 aaaaggataa aaccaagaac actggggcag gcaagcagga tctccggtgt aaaccccagc
     2221 gacgtacaga tattgatggt ttacatgggc cgataggtca tttaacgttt ggcttacatg
     2281 gctattccca gccagtttgt aatattacat ttcaacacaa ttctttgaag tcgataccac
     2341 ttttacttgc gtttttttca ctgttctttt cttccactca agcccaaaca atcagtggtg
     2401 ttgtttcaga ttattttagt aagcggccac ttgatgccgt cacgattcaa acaagctccg
     2461 gtcaccacag catcagtgat tcactcggcc aatattccat ttcggttacg agggctgatt
     2521 cgatttggtt tagttacctc aacaaacaaa caatgaagta tccggtggac acaattacgc
     2581 atcccgtaaa tttcgatgtg gctttatatg ttgatgcgcg ctggctgccc gaagtaaagg
     2641 tgcgcgcgag tgattaccgg tatgattcaa ttcaaaatcg cctggagtac gccaagatct
     2701 ttaactttca taagccaggt ataaaattga gccaatcctc acgttcgact tatgtgcccg
     2761 gcagcctgac agtcggtttt gatctcgacg agataattaa cgcattccgt tttaaacgaa
     2821 accgccaact gctctccttc caacagaggc tgatccagga tgaacaggat aaatacattg
     2881 atcacaggta ttcaaaatac ctcgtcaaga aacttacgca gcttgacggt aaagaactcg
     2941 aagacttcat gagcatctac cgtccgtctt atgaggaagt acttgccttg aacgatctcg
     3001 agctaggata ttacatagag ctgtgttata agaattacgc tttcctaaaa gcacgaagca
     3061 aaccctagct tatcttcctc ttgaaattaa cgcctggtct acctgttctt ctttttgatg
     3121 ttcttcctgc aagcgtgcta actgttttcc atatgcgagc ttcgttataa gtacaaacaa
     3181 cacaggcacc acaaagatcg ctaatgatgt ggcggccacc atgccgccaa acactgtcca
     3241 tccgatcgtt ttgcgtgctt ccgctcctgc tccagttgaa aatgcaagcg gtaatacgcc
     3301 gaaaataaat gcaagggacg tcatgatgat cggcctcaac cgcagtgaaa cagcctgcaa
     3361 agttgcatgc acaacgtcaa cgcctctgtc gacgcgctcc tttgcatatt caacaataag
     3421 aatggcattt ttcgcggaca gaccgatcaa tgtgatcaga ccaatttgtg cataaacatt
     3481 gttgctgatg ttaggtaata gcgttaatgt aagaatcgcg ccgaacgcac caacgggaac
     3541 ggcaaacagt acggaaaatg gaatactcca actttcgtac aacgcggcaa gaaaaagaaa
     3601 cacgaagaca atcgacaccg agaatataac acctgtgctg cttccggcgc gaacttcctc
     3661 ccggctcagg cctgcaaaat cataaccata tcctgcaggt aatgattgag cggcaacttc
     3721 ttttagtgcg tcgagcgcct ggccgctgct atagccctgt tttgcctgcc caagtatgtc
     3781 aatgtttctg tacaaattaa aatgagaaac caatgacggc gcttcgataa cgtgtgtggt
     3841 taccaaaga
//
LOCUS       DASQJI010000566        33045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2221366,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000566 DASQJI010000000
VERSION     DASQJI010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 33045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33045
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2221366"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VEV83_15360"
     CDS             <1..310
                     /locus_tag="VEV83_15360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46553.1"
                     /translation="FVPLARGTANQVLAVNSGGTDVAYASLDQERTGKATASGNGSTT
                     VFNITHGLGSTPTYAFVDCSSHAIARTFTVSSTTIAVTFASAPSSGTNNVIIYWRVLA
                     "
     gene            355..1596
                     /locus_tag="VEV83_15365"
     CDS             355..1596
                     /locus_tag="VEV83_15365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46554.1"
                     /translation="MAKTLCYATGGANTTTANTTECFTVSMNDFNPTETSVQRMIRSP
                     GSCSNLMIHLTANGVAATSTFVFRKNAANGNNTVSIGSSATGFFEDTTNTDTVAAGDK
                     INMNLIPGAGTGTFTYTSVGFAFDASTNTVSLNICSNGTNASNITTASQTTYYHPNAL
                     FASYITTETNFKERQRKAGTFKNLAAYISSNTSNNAATLRSRLNAANGALSASITGNT
                     SGFFEDTTNTDTVAVGDDYNLSFTTGTGSTNIFPASFTTEFENTSGVGIKSASSHSPT
                     ARVTSTTYNYGIGTLTQSATETDVQLRINGSYTFSELGVFLSANTITAASTFLFRKNA
                     ANATMTISITASTTGWFFDSVHTDAVVNTDLVNCRLTTGGTGTNLTIHQDTLYAEITG
                     GVISMTDTSSKTFANHFITKV"
     gene            1637..1963
                     /locus_tag="VEV83_15370"
     CDS             1637..1963
                     /locus_tag="VEV83_15370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46555.1"
                     /translation="MPLTLSANGTSTMIIGTEVTLYNPTSIKRFDGYVDLSAMATGDT
                     IELRVYVLIDTLGAYKQYNIQTYADSQTSPLKYIPTLPSDIGWKLTAKQTLGTARTIT
                     WRIYEV"
     gene            1984..2409
                     /locus_tag="VEV83_15375"
     CDS             1984..2409
                     /locus_tag="VEV83_15375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46556.1"
                     /translation="MTIQTTRWSPDTCDCVIEYTWDDAVASGSRTHTVSNVISRCSAH
                     TALADNTTVFNTLMDENPRKNSTLQTAIDNLATQLSETGAAGGTLKNGITYNFSYTGT
                     APNRTLTVSFTGITLTTAQKNALQNALNTKFGAGKVTVS"
     gene            2486..2686
                     /locus_tag="VEV83_15380"
     CDS             2486..2686
                     /locus_tag="VEV83_15380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46557.1"
                     /translation="MIKLRLGVATVSTDKDTELPDFSFNHAFVSFGENESKIYYLYAS
                     DKDSTIKSQAAEIAAHLLGVYK"
     gene            2702..3166
                     /locus_tag="VEV83_15385"
     CDS             2702..3166
                     /locus_tag="VEV83_15385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46558.1"
                     /translation="MAQYTVALNATANSTINTEDTWIELLPPANVSILLKRIRVSFPH
                     TTVSDVPARVRVTRASAAGATGTTGTIVKRRPAAPASVSTATVKNGTNAFSVGTVVDV
                     LLDTTVNTRGIFEWVSRDEDDYILSGVNQRLAILLRVNLASMVCNVECDWEE"
     gene            3221..3688
                     /locus_tag="VEV83_15390"
     CDS             3221..3688
                     /locus_tag="VEV83_15390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46559.1"
                     /translation="MSDFVVTNIAGNNVANTENVFIELVPPANVSIFLKKIRVAYGGT
                     GAGDNPVDIFVRRESTLGSGGVSATAKSMNTSSASSVTSVNVKTGTTAFTLGTIVDTV
                     LHTCFFVTRGTFEWIPRDKDDYIWSDAGQALAITLNSTNIAVSNLVMECFFGE"
     gene            3685..5610
                     /locus_tag="VEV83_15395"
     CDS             3685..5610
                     /locus_tag="VEV83_15395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46560.1"
                     /translation="MTTGPTVAQTAPQFAYSYCAFGQSNPLTARPQTIATYNNAVENE
                     QIAANLSTPPDTTYYKRHVIVTLGAVFVRTISDTYTASESLLKKATKVRTDTLTASET
                     RLIKAIKQRTDTLTASESITRIWIHVRTLSDTLSKSETLLKKAIKVRTDTGSLTESIT
                     KRVSHSIQDTLSKSETLTKILTHVRTLSDTLTKSETLLKTAIKARADTLGKSESITKV
                     QTKVRTLSDTLSVSETLLKRARKVLSDTLSASESITKTRIRVRTLSDTLGKSESLVKK
                     TTKLLADTRTASEQLLKTAKKILSDTLGKSETLTGQKVTGTITRTLSDTYGATETLTK
                     NVIKAITDNLGSSELLLSTRQFFRFLVDSRTVSESINKRAQKAITETATATEATIKKT
                     FKVITDTLNASESLDSTRIRENIVRTLTDTYTAAELIGKIVIYHITDVIGGGGGFKQF
                     IHQIVDTYYSSEIIQSFVTKAVLPGTSMMQAKGLEIAKNVRIAWQRRQVKPTPPIPRL
                     QLQRPKLVLKTLSDSYVTTESIQVKVIKFAPQTTTSTPKIQQLSSAQLVKETIIKTLG
                     PEIANQYVQKVIAKEREDKRLMVQQAIVEKIKLIKAQGDPDARSLKLQKLLKLLKLNK
                     LIQLALLHKTGLEVEES"
     gene            5614..7224
                     /locus_tag="VEV83_15400"
     CDS             5614..7224
                     /locus_tag="VEV83_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46561.1"
                     /translation="MSSYSDFPEVDVVDPTDSQGYGSDTLSELFKILNGKILDSRRPH
                     VLNPWKFEGPITLQQQPAVIDPAIYTTSTAGEALLYIDSVSGKLTLKKYGGSIIDLET
                     SIGLLQDLSNVNITSVANNDIIRYNSATGKWVNMALSGAGEANTASNVGTLGTGWFKQ
                     KTGVNLEFKKINAASTKITVTDDTANSKVDVDVAQANLDRNSIGGASPLSVANGGTGA
                     STLTGVLKGNGTGAVTASAQLAVASGGTGAATLTGILKGNGTSAITAASPVVVADGGT
                     GATTLTGVLLGNGTSAVTAISVGSSGNVLTNVGGTPQFQPPASGTSTMQTAKKDGTWN
                     GTGATNGAGLLNGIMVAGSGTFTQNVDTTTNGTYLTCATGSTSGNTAAIRSSYNFTAA
                     NLNPILYLRLREADITSNRLWVGFSSSVTADPVNSTYLDNKSGAMLYLAQSGTVWNVA
                     TNNGGATATITSTGVTASNNGIVSIIIKLIGATPKVSYSINGAAFVDITTTPPAGATT
                     LGLNCGTGTTTSSSRSFDFFKMDITQDG"
     gene            7490..8857
                     /locus_tag="VEV83_15405"
     CDS             7490..8857
                     /locus_tag="VEV83_15405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46562.1"
                     /translation="MAYFAEKTYNSGTDRLFLVYYALPEAVVNQNGWGVDPNYIAENI
                     QTFVGKPAVLKRKDPNNPLDVAQKGNFVHPMVQHGSGIRDVMEYQENWAIGRVHRVSL
                     NPDKGWRFDIEITDPKAKDVMKSEEHIDQYPPYVSPLILSFPHQNPNENPKSLRHWLG
                     AHIAFVDYPAFGFDRMDVAGKCFGSEQECTVKLHNASEMQSACNFCITDATLQLIGSS
                     QVSQNNISGNTMSANNNTAPNTPQNVTTVTKTPTVEVKREQVLATDTSYPTTFDKSKK
                     PAEEQPEPQQPAERQPPTNDKPSSEGEVEESPKSLDEAKNIIKNLQSVVSELTAQQAK
                     TNKFMADLQKRERIATLKTIVPKQLFKSEDKYNEELEKVYSWSGISNQEIAEFYQSKL
                     MNLTVAPKAASVTTENREQYSNFKTVPEFHKAAAADETTKTDSSHNSFMTHYRLMKRI
                     AGGSV"
     gene            8913..9371
                     /locus_tag="VEV83_15410"
     CDS             8913..9371
                     /locus_tag="VEV83_15410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46563.1"
                     /translation="MPKNTGASTGGSPGDTFAFDQANNQWKRAVSGQAGPFGFVGNLD
                     VLSETLDVLTNTYTIVRGVSDTASTMSVIVSGRICKKAESGVVAGDLVKVSATNPLTH
                     VTKWVSGTDAANLVVGRYVINETQFHRADVAAPTTNANDLIKIDIRASYP"
     gene            9430..10629
                     /locus_tag="VEV83_15415"
     CDS             9430..10629
                     /locus_tag="VEV83_15415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46564.1"
                     /translation="MLSTPTDIYGEYVDRNYEKLQREKRINSAVYNPINEKIYLEDPY
                     YGTIEQHSAGKIPWDKYPWISDYKRYRELEVALHNGSVNEDQAKYNFINPEFQDEALR
                     YNEKVEQYGAGVITSTEFPAYTVTSVSQELINMEQLERVKYNLLSAVKVINTDQLVLR
                     FPRWTDTTQSVKSGYKENDPIDTIQYGAITEQQITTEKAGVGFGFTEEYYMRQFTLPI
                     ESFIMSKIAFDFTRVRHNQVLAALPSFPDVTGNDWGAYTAANIMSTNRPAVNLNTVKV
                     AIMSNKLYKPDTIISNEAQYIDYETNTWVKGGLIGPMQASNRTQDDILTGVTGIPWLN
                     KWILNEDIAADRAYIFDSSQMIFIEGPRKTTQAQLVNPDQTVEFRKEWFKFQIFDTAA
                     GRELVSI"
     gene            10777..11676
                     /locus_tag="VEV83_15420"
     CDS             10777..11676
                     /locus_tag="VEV83_15420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46565.1"
                     /translation="MVNYWKSPEGIKAYEKIGKPYPVTTYDTDYEQFVNSTKSSDERN
                     RTKRKVTRIMRVQGADGKEYLTYSEVETRFNDIGNSYSRFRENIGTYPIPEGHVVLYY
                     DNNGEQQQKVDSISDIKTGYSIPFNSAKAAAIHKNAVDDVPQRAGRTEYFVQRANDPP
                     VSVESFQDLVNGEFDELYKHGKRVPGWPEEKKQAQAEREQLEAAREVRDYSTDEDQKI
                     RAINLESQITTDAIEADDASNIKHEGGQSDALEVIKQEEQENKEIAEEIQEEQRERLE
                     RQGFDQQQDRNSSKQSTKKASKK"
     gene            12083..12451
                     /locus_tag="VEV83_15425"
     CDS             12083..12451
                     /locus_tag="VEV83_15425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46566.1"
                     /translation="MSSPAAEATSFNLITILISVISIVIGAVTALIAKAFKAGKKEAT
                     FEGQDSLFNNMLTNAVKDQVALKEEMSRVCKNLTDINLRLTKLETIIAERDKYQRGSD
                     KGYGAFRDMQERDNSRENWR"
     gene            12473..12862
                     /locus_tag="VEV83_15430"
     CDS             12473..12862
                     /locus_tag="VEV83_15430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46567.1"
                     /translation="MFESILMQIVPPSPPPSTDVISNIVAVIVAVGAIATALGTFMSH
                     NDKFKKYGQYLTAFGQKTVEQEGNIAALGNAITGLSPEAKAYLEAQNASIAELRRRAE
                     VAEKQLEKLQGNIPEAAQADNKADLPR"
     gene            complement(12859..13332)
                     /locus_tag="VEV83_15435"
     CDS             complement(12859..13332)
                     /locus_tag="VEV83_15435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46568.1"
                     /translation="MSTQTRDYPEDIIYNFLKSKYVAYRSSLSDPNVLPADTDILWGE
                     PKSELKVYSFVVTRDTTTRLLPYLGISKVQYSALCTARFAITWIGPGKPPYLNEWEEF
                     IDYHIAKYQTDTYFKSRGIESVKPSASGITEPREPEVDQWVLSFQIIATYMKSFT"
     gene            complement(13523..13996)
                     /locus_tag="VEV83_15440"
     CDS             complement(13523..13996)
                     /locus_tag="VEV83_15440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46569.1"
                     /translation="MAEAIYATAADVRPLIGNLSAQRDNATIDNAIASATSEVNLGIG
                     RTDTNLDDTTTSPVILNTVKKITRYLAAVELLTGVQSQETTRAQLQKDAQALLDKLVS
                     EEQTETIGAAFVEMSDPVTYPANESGIIYSEGYVGLKKGPRTPFYNQYYHTFVPI"
     gene            14063..14998
                     /locus_tag="VEV83_15445"
     CDS             14063..14998
                     /locus_tag="VEV83_15445"
                     /inference="COORDINATES: protein motif:HMM:NF039819.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tube protein"
                     /protein_id="HYK46570.1"
                     /translation="MPTITPTGAPDVIKKPQFVEEVVEGTLPLSGPTFKSCGLVQSIG
                     QDITIENNKIRPLGEYDVKKQVKLGEVYTSELKFQPDNFQLMKYGMLLPVSPATTPPD
                     KTMVAPNGTVGVSLSILMSALIDGVEKYKVYTGVKFNGISGEITREGGFNVTMPFQCT
                     SISDWTVAPTFSPAATYATDPTANPWSGISSGADPLSINSVIYDTTSFKFDIDLGVQR
                     FRPNGVTAFKYSKSFQRNLSVSWNTLVYNNVLIGDLRSYTPRTVAYTIATGKVLTFNS
                     VRTESYSAGLEGGSTDFAMEEFSGVSEGGLTITDV"
     gene            15095..15880
                     /locus_tag="VEV83_15450"
     CDS             15095..15880
                     /locus_tag="VEV83_15450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46571.1"
                     /translation="MSNEEAEDDILELNKQEQPKDSQQQSQEIDLENVLANQSDKAKK
                     FDLSQFHGMDMERLNAYFGSVGDANNQIQIALSQLDKFVIPYNKSGDIIYADWQRFEL
                     KYHSVTMGAHNRRQELNAAVEDLGRQIQTVALKIQTMQQEVRDRQMRMMRGDNSKADL
                     ALSRTDKTTLDNIRVEELQKTVKSLDEIPNDMNKEMQRMREDANWLGMQMYFHIKERE
                     VFDNVRADHLDNILKACDLKQLGLPKSQELSKSSPMQVRQGVS"
     gene            15934..16098
                     /locus_tag="VEV83_15455"
     CDS             15934..16098
                     /locus_tag="VEV83_15455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46572.1"
                     /translation="MWWWEIYGDKDIYVDDLADYREYLALVHDRQRMKQDMDKQKAEA
                     EAKRRTRQAQ"
     gene            16134..16454
                     /locus_tag="VEV83_15460"
     CDS             16134..16454
                     /locus_tag="VEV83_15460"
                     /inference="COORDINATES: protein motif:HMM:NF016754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HYK46573.1"
                     /translation="MAQSFAKIGTTVNKSMSTFLKTKGDEITKEYHDTVPVRTGRLRN
                     SISGGLQGDLKYVGGATVPYAPFVEKHRGNLDEAVKKGTATMQSDLEKLVKDIFGSSP
                     PTVS"
     gene            16511..20992
                     /locus_tag="VEV83_15465"
     CDS             16511..20992
                     /locus_tag="VEV83_15465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46574.1"
                     /translation="MSFTESVTLTANTSSFTSAMQAAETAIKAAAAAAASSASSFTSQ
                     ASSMSNAAASVQRSITVYNSYGQAVKAAGSSGTALTGSLSQLSSSASSSQGAIRGMEA
                     AVANSATTTNNANSAVKFYGTSLTTSGQASAAAGTKFNAMGQAISTNVDAAQKTSTSF
                     GALNNVMGQTSQTTEQTATSTQKMGVNFSNAVGFMGAAIGSGVQLFETFESLERAQVG
                     VDRAQNQLTTSQIKVTSLQNQLNKLTAEGKTGTAEYSLVQEKLAAAHEKAETAADRLQ
                     LKQNDLNVTYADFAKNIIPEVISVGATMTGALGNMGVSTAGLKEKFSALIPALTGGAT
                     GMRGFGAALASIALNPFTIALTALAAALIAYKTNFLGFRDVTNEAGVAVGNLNPVLKL
                     GADALLAFGQTFGIAGGDIDKTSQAMHKDVDDIGKSWNLFLVILQRGVDAVGEILSNF
                     FAPLTGALSQLAAALDPAAAAIEGFFSTISSSLDPAAAAIESALTAIDTAISNFFQQT
                     LSAAGEIESWLDTNIVQPIIKGIQAIPAKLTTSAIDLVAVVWNALKAAGKAITDAAQW
                     VDQMILTPIANAINTVVSIASRINKIDIVAIVWETLKSIGKPISDALAWLATNIFNPI
                     VAAINTGLQTIGGGLGKIDLVNVIWQIIKANSKPITDAGAWINKNLIDPIVKSLEGAE
                     KAFQGGIKGLQEWGAANDLSKQKVDSHSGSVVKQSASLNEAGGKFLFVADTVSTANGL
                     LGENGDITNKSAQATDQLSAAQAKEANQITANLNAIKSLSDNYRVAIETSAGFSDSLT
                     KEDLEANRTLAVYNAMGAELTKLKDANKNAGIEVDALTKLMQESAFVQELQTKGVLEQ
                     QKALLSTEQETAVMQGKLQELNSELSRGEAQWVSYQNGIAKANLEFAQNEQKIAASQG
                     ELESLNEHLRDGSASFQAYRQGIVEADIEYDKFITSSIQAGAKQLELNDRLTLAARAF
                     GGLPGFIEPTIQNLEAFVKAGMSLTGTLKDNGEAMKQFEEIATKSWNDMTAAGQDFFK
                     KLIDSARKGGTDMVKGFDDAMQDLPPAVWENLTAADEQALKAGALFAAAGQNAAELFS
                     VKLQSGINQGMDFNTAVGYAKQAAIDMVQQFVDQNPAMAAEGQKFIEALTNATGTGIN
                     QVLQQFSSMPGPIGQMAQQMLQAYQSQGMNPMVAGSQTAATQSKAALTDIPTAAQTFG
                     QIATLFQQQVEQTLPRMATNAANGVRTAINVIPGAVNAAFSRAAGDAGGYLATIMRNS
                     QTAFAAVGNAANAVVGPINAAFSRAASVATSAFNTIRSQATSAFNAVGQAGQQAGSRV
                     SSGMQAIQQSAQRATQQVQQLKSMIDSLRDKRVTITVYVGLTGPGVGYLQHGGILYAQ
                     HGAVIDSTTKPPFITDRQMKRGNAVIGEFGKPELVLPLSKHPGDVADKEISVKSQYAK
                     GFGGGGGGRPSTMGGGKQEVSVKGKISNDVPINVYLDSRKIMSTVQRQLLEFSDAAI"
     gene            20979..22883
                     /locus_tag="VEV83_15470"
     CDS             20979..22883
                     /locus_tag="VEV83_15470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46575.1"
                     /translation="MPRFNAAWSNSSRNLLEEFGRVPPLEDITKKYVVDVAPVYAKVS
                     EYLEPLQCKIEVWDLKKLEKRYEYNSFDTRANQIIVESATVDLGIDTHGSFSFRIFDA
                     DKFLDSKLLKRRNLVIISAKKYGNEEFTNLIYGMQTKVKTVREDTGMLQYDISGIGTG
                     SILNERVINFNKVARPESLLSSNPFAGDQTMAANNLLRKLFVDPSVYVVDDVTMAEQL
                     NVDMSLLEDSEVKDILGGINQPYVDGAQVYNAILESVGAQGGINANNQAYLRYPSDIF
                     SGTKIRAWDYESDEENLDFAENTSYFMGPFEYEISWAKEDGFVNRWISKGRTQQISAS
                     SGTTGVQDGFVPTFERDLAQKFKPNASNLRDLALMLQKVGDGTSDPANTKYLHGHITL
                     DNNGTPNGAVLSYFNIPLTDIPTTMGPVYLSNLTLNFNIDASQDLWIILYDRGDDDNN
                     TIHWGVVNNPDAPSTNAVRYYHRSPPDPWVLDHFNGSGWELHPGSFSFMFSAFDSFTN
                     AVIAEDPDSIQRYGIVEDVINVEWAPNTNIVNRFVSERLATTALPKIVYNANTVTLPG
                     KIFLPGQIISIEDKLSDLPNNLNIRADILAVRYNFGGASAEFGGQLGALFTDISPVGL
                     YDFRQEEEET"
     gene            22886..23515
                     /locus_tag="VEV83_15475"
     CDS             22886..23515
                     /locus_tag="VEV83_15475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46576.1"
                     /translation="MIVEDVEAKVEYNDITQIVKWKPEDWDTVNKHFIWTREAKERKD
                     KKILKQLIDAVDYTIEHAKAGESTHSAQPLEVVEKKDRIVAAGRSRAAELITGESKAT
                     FDNMAIGLSQIPAQDSDFKLYEEVGRVSSQLTGFVGAAGSVIKHVATFSPSFPSNTYW
                     EVAPVDTDVESDDQAIFARVVFSADRPAIHVAGEDFFTVHHSTFTSSGA"
     gene            23678..28876
                     /locus_tag="VEV83_15480"
     CDS             23678..28876
                     /locus_tag="VEV83_15480"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HYK46577.1"
                     /translation="MKYSDPFVFSKKKSVFPLFMMPFEPDFNHTALMLRMDHLGRLSK
                     DSSGFGHHAIIYGNQELKQGIDTGNGPSLYQNFDGASTYLQVKDRYNLLNSSIYTTGL
                     SLAARIYPEDLTFTSGDDTKPRIILSKHDDARGLYGYVLGVWPDGSLQYTFTRGGQPY
                     SVATPPDTIKLDTSTELPDQTLAEKTTPPPPPLPYDITVAETINPGIPQQAAFVNIVA
                     NQFPASSSGAGTDPLGVKMLYPTKTSGQTWYSNNSAIVNRTDSRVLYAAALAPGEVTL
                     NSDGSIKVTKAVDAENRFYITPTTGYDHTLCSQSWSTNSSRGYMQNAQDWRNVEITAH
                     VRINSVWSTLGHAIVWYVRGGHHSTTYPCEGSAYKGNIMYADASSRFQKEMAHPNYYP
                     TTNKTTGLANNFVGRWFGYKFVCYDMTDGNVKLENWLDLNLDGNWVKVDERIDSTGWG
                     VNPGCGGSTDQKFNWGGPQVAFRFDAAKDIDFNKMSVREIDATGTGGVVTPSPPTGAG
                     VDPFGVQKLYADDPAKPNHWYMGSLTSDPMVNLSGSASNLGSGVWEGHVTTSDNPASF
                     RINVKTKSCQSDFSDSLQAKHGEDWVLREADGYTCKPDDWRNVEMTIFWYVTQWDAAD
                     EMSPYVRGGSHHDGWPIACIATEYKGQIQKAGNSRFAKEFHHLSGSTGYAFYSGNPKF
                     TLTDRTNKWTGHKFVCYDFVRATDGKKCVKMEVYAETSDETNGNPTTQNWRLMNELVD
                     DGTLADCPEKGYVSNCNGIAKQVFRWGSGMSTFRIDNVIVRVKKASIRNIIATPSSTP
                     PPPTCPTGQHWDSTLQLCVADTVTTPPPTCPTGQHWDVTLNQCVADTVTTPPPPPPTG
                     GAGTDKFGVKMIYPTKSLGDTWFLNANPGHVSGDTRLVSNAVVSFPAPDIMSFTAANI
                     RWGVTITGGYNQAITFTDQVQLRQRKYMQSPKDWTNTEMTGYFNVRHQTGATSNGGVH
                     IEMSVRGAWHTTSIPCLGTGYHMNAYPNGQIIFKKELSNEEYTFNNPVKEGATLNWVS
                     GQWFGLKMVTRSTNTGTVKIEAWLDSVANNTWLKVFETEDAGTWGGAANGCGGSDHTI
                     INWGGPIAMFRIDNIDDMQAKWWSVREIDATTSTAQPVPDPTDPVTLPITCPPGQQWD
                     ETLQKCVFPNEQTPPPAGHVNQFGIREFFADPETPRFFDKYTNSGIQGSKDTPYRYNF
                     NLPMDCVSTEFSGLIKVTTNIQEHITIKLGGGIHTTKQNMDGCCYDMGLPTQGQSPLG
                     RLLRKECPHPEFSDCSPLVRPLFTLPSIYNLEIGVAVIKVNMPNPSKDVLLQCWINLT
                     PTTTPGGNTMNNNTWQKYWEYIDRGSCFDHPLREPLGSSRQDLVMVDNATYTMRFPSI
                     REVIPISIALSPPDLCNKLSIARVTASGFDSQNPPANTIDNKATTRWSSLGIGQWIQF
                     DLGATSNLLTVCSVEIDWYHGDDRQYSFSISVSLNGQFFTDVFAGKNTRGTETYVLSR
                     QINTNARFVRITVNGNTVNQWASIEEVKIRGYANVGTPGPSDPPSCPQGYTWNPIKQI
                     CDNSPNPPPVQQCLPGMHWDSNLQVCVPNNPLPITSIVLDLAVNNTHYTTTGIDPSDE
                     TLLPSGKHFQLSSNDTDRAFRVGTLIHDVNNPMHYKWKGGIQDVRVYREYIVSSIETQ
                     NLYQNKMSIRAIPFGQVALAGFASLLTSQTSSGGFHLTGFHAKGYHVGQTEGVATDTQ
                     TSSDDI"
     gene            28891..29874
                     /locus_tag="VEV83_15485"
     CDS             28891..29874
                     /locus_tag="VEV83_15485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46578.1"
                     /translation="MSSELPITQITVPEYGLPFDAINWQLSAAKLNTKTILVCDADFA
                     AAYGAQLRGMMVRIIGTKTNGIFSPDHSYFWSADNTRWIEDTGIEHLHNLDTDEAGGL
                     YRNVLLANISNYYETDILHPSANRFVVTVQGSAVNTTANGVELVQTTTANDFAQIRLP
                     GGALDLRKKCAFSISGYANSGKNMTAKLGVAMENVGSTEALTPRFGLEVCDISNTLRT
                     WNVVSGDGTAWNMEASSENVERTTPQAIYMELNPLQNVKFTRTDVNNFDVITVKTSNI
                     PGTSQTAIGNVWGLGYKTNEAVTKTFFLNSLRILGKLPNHFLAPAQLVGAT"
     gene            29882..30373
                     /locus_tag="VEV83_15490"
     CDS             29882..30373
                     /locus_tag="VEV83_15490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46579.1"
                     /translation="MAKWNYKVRLKINRFYVAQAFNPVKGYDVEFYDWNYNGTECTAS
                     FVCSDDYSNPIERHTKEDMEEYVISKFGANIIKDWSAREDKNLAGNNTPINNPLLDRY
                     RKDTYKSYYDLLVSKEQLEETSRALSHVLPALKGVRHISPFKVVSNSSYKPDNYVVRI
                     GQW"
     gene            30367..31698
                     /locus_tag="VEV83_15495"
     CDS             30367..31698
                     /locus_tag="VEV83_15495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46580.1"
                     /translation="MVSSNADLKFYLSGTGNTNPFNSYGGPISSTQVQNDQLENLWSN
                     ILPSETLVTGFVDYRAIYVKNTNPIDTISNIHVYWAIDDPFTDLEISHRGVNASVDRL
                     ATPFTEPSTIEIGVPPTAATTTTAVTNVTPENTNSFGIKQFYQDPATPRYYTAFTNTG
                     VMASIDGYRYNWTIPVNLVSVEVGALIKITTPATTASNSFIWFKMGGGLHNTTVPNDA
                     CCYVVGIPQTGQPPATNLLRKECPFKSYHTCATVAPLFTLPTLTNREIGIVCVKLNQP
                     PNVFLQCWINQTPVNAQGTINNDTWVKYMEYNDTGGCYQSPYLNPAGASRQETIRVDN
                     STFTLRFGSTREIVASAAGNPGGPTICPIGQHYDTALQRCVPDDVGSVPNPITDPWRK
                     ATNSYATTGAIIPSLPANSFIGIWLRRVIPPNVSNLFIDSSELVVDGSGVG"
     gene            31718..32737
                     /locus_tag="VEV83_15500"
     CDS             31718..32737
                     /locus_tag="VEV83_15500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46581.1"
                     /translation="MTLTATDLKFYYSGGATNSDPNGDQGGTISSVQVPEQILSTTPF
                     VKNTMLNDVSSTNRIAGVTQYRCFYLKNTHATQTASNIKMFKNPITNMPDTVSIGYSG
                     NAVNTPEQTLTSTASKVYDVAVTTSDGVLDNTRPIRGERVTATTSVIYNVPISQVSLY
                     LKRTGNPTGTFYVRQRASTNDNVSGAALAEIGSMDVATIATTATKYTFTATTPRALAV
                     NDAITYEYANGTSSNYISVFRNTADPIAGSYEVYHDGTSWHNNSTYDTCGEVWKAGLQ
                     ADRTAPSGVTFVNPIDLASAISLPNLAPSAYIGCWFKRVVPVNCSAKVGDNFQIAVQF
                     ESPNP"
     gene            32804..>33045
                     /locus_tag="VEV83_15505"
     CDS             32804..>33045
                     /locus_tag="VEV83_15505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46582.1"
                     /translation="MVQGQDGVRLIYPSTTGGEFWFINIGNLHNDPRFIPSHVLDGDE
                     EIGFKAFGQFVSMWAKTSTGFTSGIVPSNIDHGQLAS"
BASE COUNT        11067 a         6290 c         6826 g         8862 t
ORIGIN      
        1 attcgtacct ttagcacgcg gtacggctaa tcaagtacta gcagtaaact caggtggtac
       61 agatgtagca tatgcatcac tagatcaaga aagaacaggt aaagcaacag catcaggaaa
      121 tggttctact accgtcttta atattactca tggtctaggt tctacaccaa catatgcatt
      181 tgtcgattgt tcttctcatg ctatagcaag gacttttact gtaagctcaa ctacaatagc
      241 agttacattt gcaagtgctc caagttcagg aaccaataac gtaataattt attggcgagt
      301 gttggcctag atagataggt aggtaagtag taggtatagt agtaggcatg taaaatggct
      361 aaaactctat gttacgctac tggtggtgct aacactacaa ctgcgaatac tactgaatgt
      421 tttactgtat ctatgaatga ttttaaccca actgaaacaa gtgttcaaag gatgatacgc
      481 agtcctggtt cttgtagcaa tctaatgata catttgactg caaatggcgt cgcagccacc
      541 tcaacatttg tatttagaaa gaatgctgct aatggaaata acacagtatc gataggttct
      601 agtgctactg gcttctttga ggacacgact aataccgata ctgtagcagc gggtgataaa
      661 atcaatatga accttatacc tggtgcaggt acaggaacat ttacgtatac ttctgtaggt
      721 tttgcatttg atgcttcgac taatactgtt tcattaaata tatgttctaa tggtaccaat
      781 gctagtaata ttactacagc atctcagact acatattatc acccaaatgc attatttgct
      841 agttatatta ctacagaaac caatttcaag gaaagacaga gaaaggcagg tactttcaaa
      901 aatctagctg catatatctc ttctaatacc agtaataatg ctgcaacctt acgcagccgt
      961 ttgaatgcag ctaatggcgc attatctgct agtataacgg gcaatacaag tggcttcttt
     1021 gaggacacaa ctaataccga tactgttgct gttggagatg attacaatct ttcatttaca
     1081 actggtactg gtagcacaaa catatttccc gcttctttta ctacagagtt tgagaataca
     1141 agcggtgttg ggattaaaag tgcatcaagc cattcaccta ctgctagggt taccagtact
     1201 acatataatt acggtatagg aactctcaca caatcggcta cagaaaccga tgtacagtta
     1261 aggatcaatg gttcatacac attctctgaa ctcggagtat tcttaagtgc taataccatt
     1321 accgctgcat ctacctttct atttagaaag aatgctgcta atgcaactat gactatatcc
     1381 ataacagcat ctactacagg atggttcttt gattctgtac atactgatgc tgttgtaaat
     1441 actgacctcg taaattgtcg attaaccaca ggtggaacag gtacaaactt aaccatacac
     1501 caagatacgc tatatgcaga gataacgggt ggtgtaatca gtatgacaga cacatcgtct
     1561 aaaacatttg ctaatcattt tatcaccaag gtttgatgat tattattatt atatcactat
     1621 atagtaaatc aacaatatgc cattgacctt aagtgcaaac ggcacatcga caatgattat
     1681 aggaactgaa gttacactat ataatccaac atcaataaag cgatttgacg gttacgttga
     1741 cctttcagca atggcgacag gtgatacaat agaattgcga gtatatgttc ttatagatac
     1801 tcttggagct tacaaacaat ataacatcca aacatatgct gatagtcaaa ccagtccatt
     1861 gaaatacatt cctactttac cttcagacat tggctggaag ttaacagcaa aacaaacttt
     1921 aggaacagca agaactataa catggagaat atatgaggtg taatatatcc tactactact
     1981 aaaatgacaa ttcaaacaac tagatggtca cctgatacgt gtgactgtgt aatcgaatac
     2041 acttgggacg atgctgtagc atctggatct aggactcata ccgttagtaa tgtgatttct
     2101 agatgttcag cacatacagc acttgccgat aatacaacgg tcttcaatac tttaatggat
     2161 gaaaacccaa gaaagaatag tacattacag acagcaatag ataacctcgc tactcaatta
     2221 tctgaaactg gtgctgctgg cggtactctc aaaaacggaa taacctataa ttttagttat
     2281 acaggcacag caccaaacag aacattgact gtatcattta ctggtataac cttaactaca
     2341 gcacaaaaga acgcattaca aaacgcttta aataccaaat tcggagctgg caaagtgaca
     2401 gtatcgtagt gtcggagcta taaacatctt tatgtatttc acaattaatt gatatgatag
     2461 tgatagtgag agtaagtaaa agaagatgat aaaattaaga ttaggagttg caacggtaag
     2521 cacagacaaa gatacagagt taccagattt ttcattcaat catgcttttg tgtcgtttgg
     2581 tgaaaatgaa tcaaaaatat attatcttta tgcaagtgat aaagatagta ccataaaatc
     2641 acaagcggca gagatagcag cccatctttt aggagtgtac aagtaggtag tataataaga
     2701 aatggctcag tatacagtcg ctttaaacgc tacagcaaac tcaacaataa atacagaaga
     2761 cacctggatt gaattattac cacctgctaa cgtttcaata cttttaaaac gtataagggt
     2821 gtcatttcct catactactg tatcagatgt acccgctaga gttagggtta ctagggcatc
     2881 tgccgcaggt gctacaggaa ctacaggaac tatagtaaag agaaggccag cagcacccgc
     2941 ttctgtatca accgctacgg tcaaaaacgg tactaatgca ttctctgttg ggactgttgt
     3001 ggatgtttta ctagacacaa ccgtaaatac tagaggaata tttgagtggg tctcaagaga
     3061 tgaagatgac tatattctgt caggtgtcaa tcagagactt gctatactac ttagggtcaa
     3121 tttggcttct atggtttgta atgtagaatg tgattgggaa gaataatagt aataataata
     3181 atagtaggag tattaaatga gtgagtgagt gaatgaatga atgtccgact ttgttgtaac
     3241 aaatattgca ggtaataatg ttgctaatac tgaaaatgtc tttattgaac ttgttccacc
     3301 agcaaacgtt tcaatatttt tgaagaagat aagagtcgca tacgggggta ctggtgctgg
     3361 tgacaaccct gtagacatat tcgttcgcag agaatccacg ctaggttctg gtggcgtttc
     3421 ggctactgcc aaatcaatga atactagtag tgcttcatcc gttacgtcgg ttaatgttaa
     3481 aacgggtact actgctttta cacttggtac tattgtagat acagtactcc atacgtgctt
     3541 tttcgtaaca cgtggaacgt ttgaatggat tccaagagat aaggatgatt atatttggag
     3601 tgacgcaggg caggctcttg caataacgct taacagtact aacattgctg tttctaatct
     3661 ggtaatggag tgcttctttg gggaatgact acaggtccaa cagtagcaca aacagcacca
     3721 cagtttgcat attcttactg tgcttttggt cagtcaaatc ctctcacagc aaggccgcag
     3781 actatagcaa catacaataa tgctgtagaa aatgaacaga tagcagcaaa tctatctaca
     3841 ccacctgata ctacatacta caagcggcat gttattgtaa ctttaggtgc tgtatttgtt
     3901 agaacaatat cagatactta tactgcttca gagtccttat tgaagaaagc aacaaaggtt
     3961 agaactgata cattaacagc ttcagaaacc agacttatca aggctatcaa gcaaaggact
     4021 gatactttaa cagcaagtga atctataaca aggatatgga ttcatgttag aactttatct
     4081 gatacattaa gcaagtctga aacattacta aagaaagcaa tcaaggtcag aactgataca
     4141 gggtcattaa ccgagtccat aaccaagaga gtaagccaca gcattcaaga cacattatcc
     4201 aagtcggaaa cactaacaaa gatactcact catgttagaa cactatcaga tacattaact
     4261 aagtctgaga cattactgaa gacggcaatc aaagcaaggg cagacacatt aggtaaaagc
     4321 gaaagcataa ctaaggttca aacaaaggtt agaacattaa gcgatacctt aagtgtatct
     4381 gaaaccttac tcaaacgagc taggaaagta cttagtgata ctctatcagc ttcagaatca
     4441 attactaaaa cgcgtatcag agtaaggaca ttatcagaca ctttaggtaa atcagaatct
     4501 ttagtcaaga agaccaccaa acttttagca gacactagaa cagcaagcga gcaactttta
     4561 aagactgcta aaaagatatt aagtgataca ctaggcaaaa gcgaaacatt aacaggtcag
     4621 aaggttacag gcacaattac taggacatta agtgatacat atggagccac cgaaacgctt
     4681 acaaagaatg tcattaaagc aatcacagat aatctcggaa gttctgaact attgctttcg
     4741 accagacagt tcttcagatt tttggttgat agtagaacag tttcggaatc gattaacaag
     4801 agagcgcaga aagcaatcac ggaaacggca acagccacgg aagcaaccat caagaaaaca
     4861 ttcaaagtta taactgatac tctaaacgct agtgaatcat tagattctac taggattaga
     4921 gagaatatag taagaacact tacagatact tataccgcag ccgaacttat cggtaagatt
     4981 gtcatttatc atattacaga tgttataggc ggcggaggtg gattcaagca gtttatacac
     5041 caaatagttg atacctatta ttcatcagaa ataatacaat cgtttgttac taaagctgtt
     5101 ttaccaggca catcaatgat gcaggctaaa ggcttagaaa ttgctaagaa tgtaagaata
     5161 gcctggcagc gacggcaagt aaaaccaacc ccaccaatcc caagactcca gctacaaaga
     5221 ccaaagctag ttttaaagac attatcagat agctatgtta caactgaatc aatacaagta
     5281 aaggtgataa agttcgcgcc tcagacaact accagtaccc ctaaaataca gcagttgtcg
     5341 tcggcacaat tagttaaaga gactatcata aaaacattag gaccagaaat agctaatcaa
     5401 tatgttcaga aggttatagc taaagagcgc gaagataaac ggttgatggt tcaacaagct
     5461 atagttgaga agattaaact tattaaagct caaggtgacc ctgatgcaag gtcgctaaag
     5521 ctgcagaaac ttttgaaatt gttaaagcta aacaaattaa tacaattggc attacttcac
     5581 aaaacagggc tagaggtaga agaatcataa acaatgtcta gctattctga ttttcctgaa
     5641 gtagatgtag tagatccaac tgattcacag ggttatggtt cggatacttt atctgaatta
     5701 ttcaaaatac ttaatggtaa gattttagat agtagaagac cacacgttct caatccttgg
     5761 aagtttgagg gacctatcac attacagcag caaccagcag taatagaccc tgcaatatat
     5821 acaacatcaa ctgctggaga ggcattacta tacattgatt ctgtatcagg taaattaaca
     5881 ctcaaaaagt acgggggttc gattatagat ttagaaacct ctataggatt acttcaagac
     5941 ctatctaatg tcaatataac ttcagtagca aataacgaca taatcagata caactctgca
     6001 actggcaagt gggtgaatat ggcgttatca ggtgcgggtg aagctaacac agcatctaat
     6061 gttggtactc taggaacagg atggttcaag cagaaaacgg gtgttaattt agagtttaag
     6121 aagattaacg cagcttcaac aaagattaca gtaaccgatg atacagcaaa cagcaaagta
     6181 gatgttgatg tagctcaagc taatttagac cgaaactcaa taggtggtgc ttcacctcta
     6241 tcagttgcta atggtggtac tggagcttct accttaacag gtgttctaaa aggtaatggc
     6301 acgggtgcgg taacagcatc agcacagtta gcggttgctt caggtggtac gggtgctgct
     6361 acattaacgg gcatcctgaa aggaaatggt acttctgcca taactgctgc aagtcctgta
     6421 gttgtggctg atggtggtac tggagctaca acattaactg gggtattgct aggtaatggc
     6481 acatctgcgg ttactgctat atctgtaggt agtagcggaa acgttcttac caatgtcgga
     6541 ggtacaccac aatttcaacc ccctgcatcg ggtactagca caatgcagac agcaaagaaa
     6601 gacggcactt ggaacggtac aggtgcgaca aacggtgctg gtcttcttaa tggtataatg
     6661 gtagcaggtt caggaacatt cacccaaaac gtagatacta ctactaatgg cacttaccta
     6721 acatgtgcaa ctggttcaac atcaggtaac acagcagcaa taagatcttc ttataacttt
     6781 actgctgcta atctgaaccc tattctatat ttgagattaa gagaggcaga tattactagc
     6841 aataggttat gggttggctt ctcatctagt gtaacagcag atcccgttaa ctctacttat
     6901 ttggataata aatctggagc aatgctatat ctagctcaaa gcggtactgt atggaatgtt
     6961 gcaactaaca atggtggtgc tacagctaca ataacatcaa caggtgtaac agcgtcaaac
     7021 aacggaattg tatctataat tataaagctg ataggcgcaa ctcctaaagt ttcctattca
     7081 attaatggtg ctgcatttgt agatattact acaacacctc cagcgggtgc tacaacttta
     7141 ggcttaaatt gtgggactgg tacaactaca tctagcagta gatcatttga cttctttaaa
     7201 atggacataa cacaagatgg ctaatacaat ctatcttaac tttggattat cagacagact
     7261 actaaattat attgtgacaa catatccaaa tgcgcatatc gtagagcacg gcaatactta
     7321 cgtaataatt gatgtttcat taatgaccgt accagaacag aacggaatga agaacgatat
     7381 agcttctaga attgtagaac aaatttagtc tactagtaga ctgattgcat agaagatttc
     7441 tctatctagc gtcttagttc tcactttagt tcataactat tgtcttcttg tggcatattt
     7501 cgcagaaaag acttacaatt ctggtactga cagattattc ttagtatatt acgcattacc
     7561 tgaagctgta gttaatcaga atggttgggg tgttgatcct aactatatag cagaaaacat
     7621 tcaaacattc gtaggtaaac cagcagtcct taagagaaaa gaccctaaca atcctctaga
     7681 tgtagctcaa aaaggaaatt tcgtacatcc gatggttcag cacggtagtg gtatcagaga
     7741 cgttatggag tatcaagaga attgggccat aggacgcgtt catcgagtat cattgaatcc
     7801 tgataaagga tggagatttg acattgagat aactgaccca aaggcaaagg atgtaatgaa
     7861 atccgaagaa cacatcgacc aatacccacc gtatgtatcg cctctaatat tatcattccc
     7921 tcatcaaaat ccaaatgaga atccaaaatc gctacggcat tggttgggtg ctcatatcgc
     7981 ttttgtcgat taccccgcat ttgggtttga tagaatggat gtagcgggta aatgtttcgg
     8041 ctcagagcaa gagtgtacag taaaattaca taatgcatct gaaatgcaaa gtgcatgtaa
     8101 cttttgcatt acagacgcaa ctcttcagct tattggtagt tctcaagttt ctcaaaacaa
     8161 catttcaggt aatacaatga gtgcaaataa caatactgca ccgaatacac ctcaaaatgt
     8221 aacaacagtt acaaagacgc cgacagttga ggttaagcga gagcaagtat tagctacaga
     8281 taccagttat ccaactactt ttgataaatc taagaaaccc gctgaagaac aaccagaacc
     8341 acaacaacca gcagaaagac aaccaccaac gaacgacaaa ccaagttctg agggtgaagt
     8401 agaggaatcg ccaaaatcct tagacgaagc aaagaacatt atcaagaatc ttcagagtgt
     8461 tgtaagcgaa ctaacagcac agcaagccaa gaccaacaag ttcatggctg acttgcagaa
     8521 acgtgagcgt atagccacac taaagactat agttccaaaa cagctcttca agtctgaaga
     8581 caaatacaat gaagaactag agaaagtcta ttcatggagt ggtatatcaa accaggaaat
     8641 agcagagttc tatcagtcta aattaatgaa tctaacagta gctcctaaag ctgcatcagt
     8701 aacaacagag aatagagaac agtatagtaa tttcaaaact gttcctgaat ttcataaagc
     8761 ggcagcagct gatgagacaa ctaaaaccga tagttctcac aactcattca tgacacacta
     8821 ccgattaatg aaaagaattg caggaggttc agtttaacta aatgccttac ggagctacag
     8881 aaccaggata taatttcctt caaatccctg gtatgccgaa gaatacggga gcttctacag
     8941 gtggatcacc tggggacact ttcgcttttg accaggcaaa caaccaatgg aaacgtgccg
     9001 tatcaggtca agcgggtccg tttggattcg taggtaactt agatgtatta tcagaaacac
     9061 tcgacgtatt gacaaataca tacacaatcg taagaggtgt atcagataca gcttcaacca
     9121 tgtccgtaat tgtttctggt aggatatgta agaaggctga atctggagta gtagcaggtg
     9181 acctagtaaa ggttagcgca actaatccac taactcatgt aacaaagtgg gtaagcggta
     9241 cagatgcagc aaacctagta gtaggtcgat atgtaattaa tgaaacacag ttccataggg
     9301 cagatgttgc agcaccaacg acaaacgcga acgatctaat caagatcgat atcagggcaa
     9361 gctacccata gttagtagta gtagagtagt tctgatattg gaaatttcga taggtgaatt
     9421 atagtaaaaa tgttatcgac tccaactgac atttacggtg aatacgtaga tcgcaattat
     9481 gagaaacttc agcgtgagaa gcgtatcaat tcagcagtct acaacccaat taacgaaaag
     9541 atatacttag aagatcctta ctatggtaca atagaacaac atagcgctgg taagattcct
     9601 tgggacaaat acccctggat ctctgactac aaaagataca gagaacttga agtagcttta
     9661 cacaatggtt cagtaaacga agatcaagct aaatacaatt tcataaatcc tgaattccag
     9721 gatgaagctc ttcgctataa tgagaaagta gagcaatacg gtgcgggtgt aatcacatct
     9781 accgaattcc ctgcatacac agtaacaagt gtgagtcagg aactcataaa catggaacaa
     9841 ctagagcgtg tgaaatacaa cctgctatca gcagtaaaag tcataaacac ggaccagcta
     9901 gtactacgat tcccaaggtg gactgataca acacaatctg tgaagagcgg ttacaaagag
     9961 aacgatccga tagacaccat acagtacggt gcaattaccg agcaacagat caccacagag
    10021 aaagcaggtg tgggatttgg ctttacagaa gaatactaca tgagacagtt tacgttacca
    10081 attgaaagtt tcattatgag taagattgct tttgacttta ccagggttag acataaccag
    10141 gtattggcag cattaccttc atttcctgat gtaactggta acgactgggg tgcttacaca
    10201 gcagcaaaca tcatgtctac taatagacca gcagttaatc taaacacggt caaggtcgca
    10261 attatgtcaa acaagctata caaacctgat acaataatca gcaatgaagc tcagtatatc
    10321 gactatgaaa ctaatacctg ggtgaaaggc ggcttgatag gaccaatgca agcgtccaac
    10381 agaactcaag acgatatact cacgggtgta acgggtattc cttggttgaa caaatggatc
    10441 ttgaatgaag atattgcagc agatagagca tacatcttcg atagcagtca aatgatcttt
    10501 atcgaaggtc cgagaaagac aacacaagca cagctcgtta acccagatca gacagtagag
    10561 ttccgcaaag agtggttcaa attccaaata tttgataccg ctgcaggaag agaattagtt
    10621 tcgatttagt agttaaccta ctcgagacat tcttcctcat ctttacccta accatgttag
    10681 ggatgtttat ttatcagttt attcaatgga tgaaagaacg tgactagttc tcactaactt
    10741 tttaagacct aatgtaatta gaggtattat tataaaatgg ttaattattg gaaatctcca
    10801 gaaggtataa aggcttacga gaagataggc aagccatacc cagtaacaac atacgacaca
    10861 gactatgaac agtttgtaaa cagtactaaa tcatcagacg aacgtaatag aacaaagcgc
    10921 aaagtcacac gaataatgcg tgtacaaggt gctgatggta aagagtatct aacatatagc
    10981 gaagttgaaa cacgctttaa cgatatcggt aatagttatt cccgctttag ggagaatata
    11041 ggcacttacc caattcctga gggtcatgta gtcttatact acgataataa tggcgaacag
    11101 cagcaaaagg ttgattcaat aagcgacata aagacaggtt attcaattcc attcaattcc
    11161 gctaaagctg cagctataca taagaacgca gtagacgatg taccacaaag agcgggaaga
    11221 actgaatact ttgttcaacg tgctaatgat cctccagtat cagttgaaag ctttcaagat
    11281 ctagtaaatg gagagtttga cgaattatac aaacacggta agcgtgtccc tggttggcct
    11341 gaagagaaga agcaagctca agcagaacgc gaacagctag aagcagctag ggaagttaga
    11401 gattattcaa cagatgaaga ccaaaagatt agagccataa atctagaatc tcaaataact
    11461 actgatgcaa tagaagcgga tgatgcatct aacataaaac acgaaggtgg tcaatccgat
    11521 gcacttgaag tcataaagca ggaagagcaa gagaataaag agatagccga agagatccag
    11581 gaagaacaac gcgagagatt agagcgacaa ggattcgatc agcagcaaga tcggaatagt
    11641 agtaagcaaa gcactaagaa ggcttctaag aagtagtaga gtatgcgtaa aactctattc
    11701 tggaccgcta tttattcaac tgcagcgttt acggtcctta ctatctataa tatttacttc
    11761 ctgcataacc ttgaagtaga cgataacact actagattct ttgctataac tgcaaaccag
    11821 cagataagcc attcaatagc tttagtgatc cttatacttt tggtagtcga gttatattat
    11881 cagaagaaag tcgtaggagg accaaagatt acgttaggaa cagcatacac ctctaaagaa
    11941 gaagtgaaat cgatacaccc tgatattcct gaatcatatt ttgaagatcc gacatcaaaa
    12001 tcagtagaag ataggattaa cggtaatagt cttagttcca aagaaggacg aaacgaataa
    12061 aatatactga ctttacatct ctatgagttc gccagcagca gaagctacca gttttaattt
    12121 gatcactatt ctgatctcgg taatatcgat agttataggt gctgtgacag cactaatagc
    12181 taaagcattc aaagcaggta agaaggaagc aacttttgaa ggtcaagact ctttatttaa
    12241 taatatgctc actaatgcag ttaaggatca ggttgcatta aaggaggaaa tgagtagggt
    12301 atgcaagaat ctaactgata taaacctgag actaacaaag cttgagacta taatcgcaga
    12361 gcgcgacaaa taccagcgtg gctcagacaa aggctatggt gcttttcgtg atatgcaaga
    12421 aagagataat agtcgcgaga attggagata ataggtagta gaagtagtaa aaatgtttga
    12481 atctatatta atgcagatag taccaccttc accaccacca agcacagacg ttatcagtaa
    12541 tatagtagcg gtgattgtag cggttggtgc tattgccaca gcattaggta catttatgtc
    12601 ccataacgac aaattcaaga aatacggtca gtatttgact gcattcggtc agaaaacagt
    12661 cgagcaagag ggaaatattg cagctcttgg gaatgctata acaggtctat cacctgaagc
    12721 taaagcctac ctggaggctc agaatgcttc aattgcagag cttaggcgta gagcggaagt
    12781 agcagagaaa cagttagaga aattgcaggg caatattcca gaagcagcac aagcagataa
    12841 taaagctgac ttaccacgtt aggtaaaaga cttcatataa gtagcaatga tctgaaaact
    12901 cagaacccat tgatctactt ctggttctct aggttctgta atacctgaag ctgaaggttt
    12961 tacagactct atccccctac ttttgaaata tgtatcagtc tgatattttg ctatatgata
    13021 atctataaac tcctcccatt catttagata aggtggttta cctggtccta tccatgttat
    13081 agcaaaacgg gcagtacata gcgctgaata ttgtactttt gaaatcccta gatacggcag
    13141 taatctagta gtggtatctc gtgttacaac aaaagaatat actttaagtt ctgatttggg
    13201 ttcaccccat aaaatatcgg tatctgcagg tagaacgttc ggatcgctta agctgcttct
    13261 ataagctaca tacttactct ttagaaagtt atagatgata tcttcagggt aatcccttgt
    13321 ctgagtactc atgtctttgt atacagatgt aattttgtag tattaccaat agcaggacat
    13381 tgtacgggtt cacgttgtgt tgatggttta ccacaaaagc gacatttacc agggtcgatc
    13441 attctagcag gggaatcttc tgctaatgtt ctcgctgtta cgtcttcgcc tgcggcgtta
    13501 gcttgtctgt tcattcttat tgtcatattg gtacaaaagt atgataatac tgattgtaga
    13561 acggtgttct cggtcccttc ttgagtccta catatccttc actataaatt attcctgatt
    13621 cattagcagg atatgtaaca ggatcagaca tttcaacaaa tgcagctcct atcgtctctg
    13681 tctgttcttc agatactagt ttatctaata gagcttgagc gtccttctgc agttgtgctc
    13741 tagttgtctc ttgagattgt acacccgtca atagctcaac agcagctaga tatctggtta
    13801 tcttcttgac tgtgtttaag attacaggtg aagttgtggt atcatcaaga tttgtatcag
    13861 tccttcctat acctaaattt acttcagatg tagcgctagc aatagcatta tctattgttg
    13921 cgttatctcg ctgtgccgat aagttaccga ttaaaggtcg gacatctgca gcggttgcgt
    13981 aaattgcttc tgccatatta ctactactac taattcttag ttctcaagtg tattttaaac
    14041 ttcttgagaa gtataatata aaatgccaac aattacccca actggtgctc cagatgttat
    14101 aaagaaacct caatttgttg aggaagtagt agaaggaacc ttacccttat caggtccaac
    14161 attcaaatca tgtggactag ttcaatcaat aggtcaagat ataacaattg agaataataa
    14221 gattcgtcct cttggtgagt acgatgtaaa gaagcaggtg aagttaggag aagtttatac
    14281 atcagaactt aaattccaac ctgataattt ccaacttatg aaatatggta tgcttctacc
    14341 tgtatctcca gcaaccacac cacctgacaa aacaatggtc gctccaaatg gtactgtggg
    14401 tgtatcatta tcaattttaa tgtctgcttt gatagatggt gttgagaaat acaaagtcta
    14461 tacaggtgtt aaattcaatg gtattagtgg tgaaattact agagaaggtg gttttaatgt
    14521 cactatgccc ttccaatgta cctctatatc tgattggaca gtagcaccaa cattttcacc
    14581 agcagcaaca tacgcaacag atccaacagc taacccgtgg tcgggtatat cttcgggtgc
    14641 tgacccatta tcaattaact cagtaatata tgatactaca agcttcaagt ttgatataga
    14701 tttaggagtt cagcgtttta gacccaatgg tgtaacagcc ttcaaatatt cgaaaagttt
    14761 ccagcgtaac ctatcagtct catggaatac actagtgtat aacaacgtct tgataggtga
    14821 cttgagaagt tacacaccta ggaccgtagc ttatacaatc gcaacaggta aggtcttaac
    14881 attcaactct gttagaactg aatcttacag cgctggtctt gaaggtggat caactgattt
    14941 cgctatggaa gaattcagcg gtgtgtccga aggtggacta acaatcacag acgtataata
    15001 gaagaatctt actatcaatc agtctactag tagacaaatt tgagagatat gtatttttat
    15061 ctctcttcat atcttttatt atagcatata caaattgtca aatgaagaag cagaagatga
    15121 tattttagaa ctcaataaac aagaacagcc taaggattca caacagcaat cacaagaaat
    15181 agacttagag aatgttttag caaaccagag tgataaggca aagaagtttg atttatcaca
    15241 atttcacggt atggacatgg agaggttaaa tgcatacttt ggttcagtag gtgatgcaaa
    15301 caaccaaatc caaatagctt tatcacaact tgataaattc gttattccgt ataacaagag
    15361 tggcgatatt atctatgcag attggcagcg gtttgaactc aaataccata gcgttactat
    15421 gggtgcacat aatagacgac aggaattaaa cgcagcagtt gaagatcttg gtagacagat
    15481 tcaaaccgta gcactcaaga tccaaactat gcagcaagaa gttagagata gacagatgag
    15541 gatgatgaga ggtgataata gtaaagcaga tcttgcgtta tcacgaactg ataaaactac
    15601 tcttgacaac atcagagttg aagaacttca aaagaccgtc aaaagtttag atgagattcc
    15661 aaatgatatg aataaggaaa tgcaacgtat gcgtgaagat gcaaactggt taggaatgca
    15721 gatgtatttt cacatcaagg aaagggaggt gtttgacaat gtcagagccg accaccttga
    15781 taatattctg aaagcttgtg acttgaagca acttggcctc ccaaagtctc aagaactctc
    15841 aaagagttcg cctatgcagg ttcgtcaagg agtcagttaa ccgaccgtga aattcgaatt
    15901 ttacaacact acgtatggaa gcgagacttt gacttgtggt ggtgggaaat ctacggagat
    15961 aaagacattt acgttgatga ccttgccgac tacagagaat acctggcatt ggttcatgac
    16021 agacagcgaa tgaagcaaga catggacaaa cagaaagcag aagcggaggc gaagagaagg
    16081 acacggcagg ctcagtaaca atatcaattg atgctactaa aagcttagac aagatagctc
    16141 aatcttttgc aaagataggg actactgtaa acaagagcat gtctacgttt cttaagacaa
    16201 agggagatga gataacaaag gaatatcatg atactgtgcc cgtccgtaca ggaagactac
    16261 gcaattctat ttctggaggt ttacaaggtg atttgaaata tgttggaggt gctacagtcc
    16321 cttatgctcc atttgtagaa aagcatagag gtaatttaga tgaagctgtc aagaagggca
    16381 cagcaactat gcaatcagat ttagaaaagt tggttaaaga tatttttggt agtagtccac
    16441 ctactgtttc ttaatacttc atataataat cacttatgta aaaatacaat agggctagtc
    16501 tagactaaaa atgagtttta cagaaagtgt tacattaaca gctaatactt catcgtttac
    16561 aagtgcgatg caagcagcag aaacagccat aaaggctgcg gctgctgcag ctgcatcttc
    16621 tgcctcttca tttacaagtc aagctagttc tatgtccaat gctgcagcat cggttcagag
    16681 aagtataaca gtttacaatt cttacggtca agccgttaaa gctgcgggtt ctagtggtac
    16741 tgctctaaca ggttcattat cacagttatc ctcttcggca agcagcagtc agggagcaat
    16801 caggggaatg gaggcagcag tagctaatag cgcaactaca acaaataacg ctaactctgc
    16861 tgtcaagttt tacggtactt cacttacaac tagcggtcaa gcttcagcag cagcaggaac
    16921 taaattcaat gcaatgggtc aagctattag cactaatgta gatgcagctc aaaagacctc
    16981 aacatcattt ggtgctctta ataacgtcat gggtcaaacc tcacaaacta ccgaacaaac
    17041 agccacatca actcagaaaa tgggtgttaa ttttagtaat gctgtagggt ttatgggtgc
    17101 tgctataggt tcaggtgttc aattattcga aacattcgaa tctctagagc gtgctcaggt
    17161 aggtgttgat agagcacaaa accaacttac aacttctcaa atcaaagtta catcattaca
    17221 gaaccagtta aacaagctaa cagcagaagg taaaacagga acagcggaat attccctagt
    17281 tcaggagaaa ttagcagcag ctcatgagaa agcagaaaca gcagcagata gacttcagtt
    17341 aaaacagaac gacttgaacg taacatatgc cgactttgct aagaatataa ttcctgaagt
    17401 tatttcggta ggcgctacta tgacgggtgc tttaggaaat atgggggtaa gtacagcggg
    17461 attaaaggag aaattctcag cattaatacc agcactaaca gggggtgcaa caggaatgcg
    17521 gggatttgga gccgctctag cttctatagc gctaaatcct tttacaatag cattaacagc
    17581 gctagcagcg gcattaatag cgtataaaac taatttcttg ggctttagag atgtaactaa
    17641 tgaagcaggc gtagcagtag gcaacttaaa cccagtattg aagttaggtg ctgatgctct
    17701 actagcattt ggtcaaacat ttggtattgc tggaggtgat attgataaaa cctcacaagc
    17761 aatgcataaa gatgtagacg atatcggaaa gtcttggaat ctatttctag ttatattaca
    17821 aagaggtgtt gatgcagttg gagagatact gtctaatttc tttgcacctc taactggagc
    17881 actatcacag ttagcagcag ctttagaccc agcggccgca gcaatagaag gattcttttc
    17941 tactatcagc agttcgttag atcctgcagc tgcagcaata gaaagcgcat taactgctat
    18001 agacacagca atatctaact tcttccaaca aacattaagc gctgcgggag agatagaatc
    18061 atggctagac acgaatatag tacagccaat aataaaagga attcaagcaa taccagcaaa
    18121 actaactaca agcgctatag acctggttgc tgtagtatgg aatgcgctta aagcagcggg
    18181 taaagcgata actgatgcag cacaatgggt agaccaaatg atattaaccc ctattgccaa
    18241 tgcaattaat acagtagttt caattgcatc taggataaac aagatagata ttgttgctat
    18301 agtatgggaa acactcaaat caattggtaa acctattagt gacgcactag catggttagc
    18361 gacaaatatc tttaacccta tagtcgcagc aatcaatact ggtcttcaaa ctataggagg
    18421 tggtcttggt aagatagacc tggtaaatgt aatatggcag attatcaagg caaattcaaa
    18481 gcctataact gatgcaggtg cttggattaa caagaacctc atagacccaa tagttaaatc
    18541 attagaaggt gctgagaagg catttcaagg tggtatcaaa ggattacaag agtggggtgc
    18601 tgctaatgat ttatcaaagc aaaaggtaga tagccattcg ggttctgttg taaaacaatc
    18661 cgcatcactc aatgaagcag ggggtaaatt tctatttgta gcagatacgg taagcacagc
    18721 taacggttta ctgggtgaaa atggtgatat cacaaataaa tcagctcaag ctactgacca
    18781 gctttcagca gctcaagcta aagaagcaaa ccaaataact gccaatctta acgctattaa
    18841 atcattaagc gataactaca gagtagcaat cgaaacttct gctggtttct ctgattcact
    18901 tacaaaagaa gatctcgaag caaaccgcac attagcggta tataatgcga tgggtgcgga
    18961 gttgaccaaa ctcaaagatg ccaataagaa tgcaggaata gaagttgacg ctctaactaa
    19021 actgatgcaa gaatctgcat ttgttcaaga attacagact aaaggcgttt tagaacagca
    19081 gaaagcattg ctttcaacag agcaagaaac cgcagtaatg cagggtaaac tacaggaatt
    19141 aaactctgaa ttatctaggg gtgaagctca atgggtatca tatcagaacg gtatcgctaa
    19201 agctaattta gaatttgcac agaatgagca aaagatagca gcatcacaag gtgaattaga
    19261 atcattaaat gaacatctca gagatggttc ggcatcattc caagcctata gacagggtat
    19321 tgttgaagca gatatagaat atgacaagtt cataacatct tctattcaag cgggtgctaa
    19381 acagctagaa ctaaacgata ggttaacgtt agcagcgcgt gcatttggtg gattaccagg
    19441 atttatcgag cctaccatac aaaacttgga ggcttttgtt aaagctggta tgtcgcttac
    19501 gggtacatta aaagacaatg gtgaggccat gaaacagttc gaagagatag caactaaatc
    19561 atggaatgat atgactgctg cgggtcagga tttctttaag aaactgattg attcggctag
    19621 gaaaggaggt actgacatgg taaaaggatt tgatgacgca atgcaagacc ttccccctgc
    19681 tgtatgggaa aacctaacag cagcagacga gcaagcacta aaagctggag cgttgtttgc
    19741 tgcagcaggt cagaacgcag cagaactatt ttcagtaaaa ctacagtcag gaatcaatca
    19801 gggaatggat ttcaatactg ctgtaggata tgccaaacaa gctgctatag acatggttca
    19861 gcagtttgtt gatcaaaacc cagcaatggc agcagaagga cagaagttta tcgaagcttt
    19921 aactaacgct acagggacgg gcataaacca agtattacaa caatttagct cgatgcctgg
    19981 tccgattggc caaatggcac aacaaatgct acaagcatac caatcccaag gtatgaatcc
    20041 tatggtagca ggttctcaaa ctgcagcaac tcaatcaaaa gcagctttaa cggatattcc
    20101 aacagcagca cagacattcg gacaaatagc tacattattc cagcagcaag tcgagcaaac
    20161 actaccaaga atggccacaa atgcagcaaa cggagtaaga acagccataa atgtgatacc
    20221 tggagccgta aacgctgcat tttcaagagc tgcaggcgat gcaggcggct atttagcaac
    20281 aattatgaga aattcgcaaa ctgcttttgc tgctgtaggt aatgctgcta atgcagtagt
    20341 aggaccaata aacgcggcat tctcaagagc ggctagcgtt gcgacttcag cgtttaacac
    20401 aatacgaagt caagcaactt cagcattcaa tgctgtaggt caagcgggtc aacaagcagg
    20461 aagcagggtg tcatctggta tgcaagcaat tcaacaatca gcacaaagag caacacaaca
    20521 agtccaacaa ttaaagagta tgattgattc actcagagat aaacgagtta caattaccgt
    20581 atatgtgggt cttactggtc ctggagttgg ttatctacaa cacggtggta ttttgtatgc
    20641 gcaacatggc gctgttatag attcgacaac aaaaccacca tttatcacag atagacagat
    20701 gaaacgtggt aatgctgtca taggtgaatt tggtaaacct gagctagtcc tacctctatc
    20761 aaaacaccct ggagatgtag cagataaaga gatttcagta aaatcacagt atgctaaagg
    20821 cttcggtggt ggtggtggtg gtcgtcctag tacaatgggc ggcggcaagc aagaagtatc
    20881 agttaaaggt aaaatatcga atgatgttcc tattaatgtc tatcttgata gtcgtaagat
    20941 aatgagtaca gtacaaagac aattgttgga gttctcagat gccgcgattt aatgctgcat
    21001 ggtctaattc ttcacgtaac ctactagaag agtttggtcg cgttccacct ctagaagata
    21061 ttacaaagaa gtatgtcgta gatgtcgctc cagtatacgc taaagtttct gagtatctag
    21121 aaccactcca atgtaaaata gaggtatggg atctaaagaa attagagaaa cgttatgaat
    21181 acaattcatt tgatactaga gcaaatcaaa tcattgtaga atctgctaca gtagatttgg
    21241 gtatagatac acacggcagc tttagcttcc gtatatttga tgcagataaa tttctagatt
    21301 ccaagttact gaagcgaagg aatttagtaa tcatatcagc aaagaagtat ggtaatgaag
    21361 aattcaccaa tcttatctac ggtatgcaga caaaggtaaa gaccgttagg gaagatacgg
    21421 gaatgctgca atatgatatt agcgggattg gtacaggttc catattaaat gagcgcgtta
    21481 tcaattttaa caaagtagca agacccgaat ccttgttatc atcaaatcca ttcgctggag
    21541 atcagacaat ggcagcaaat aacttgctgc gtaagctgtt tgttgatcct tccgtgtatg
    21601 ttgtagacga tgttactatg gctgaacagc ttaacgtcga tatgtcatta ctagaagatt
    21661 cagaagttaa agacatcttg ggaggaatta atcagcctta tgttgatggt gcacaagttt
    21721 ataatgctat actcgaatcg gtgggtgcac aaggaggtat aaacgcaaat aatcaagcct
    21781 atctaagata tccttctgac atattttcgg gtacaaagat tagagcatgg gactatgaat
    21841 cagatgaaga gaatctagac tttgcagaaa acacttctta ctttatgggt ccgtttgaat
    21901 acgaaatctc atgggctaaa gaagacggct tcgttaatcg gtggatctca aaaggtagaa
    21961 ctcaacaaat aagcgctagt tcaggtacaa caggtgtgca agatggtttc gtaccgacat
    22021 ttgagcgaga cttagcacaa aagttcaaac ccaatgcttc taacctcaga gatctagctt
    22081 taatgctgca aaaggttggt gatggtacta gcgatcccgc gaatacaaaa tacctgcatg
    22141 gtcatatcac attagataat aatggtactc caaacggtgc tgtcctttct tactttaaca
    22201 taccgctaac tgatatccct acaacaatgg gaccagttta cttatcgaat ttaacattga
    22261 actttaacat agacgcttct caagatctgt ggattatctt gtacgatagg ggagatgacg
    22321 ataataatac aatacattgg ggtgttgtaa acaatcctga tgcaccttca actaacgcag
    22381 ttagatacta tcataggagt ccacctgatc cttgggtatt agaccacttt aacggctcag
    22441 gttgggagct tcaccctggt tcatttagct ttatgttcag cgcgtttgac tcattcacta
    22501 atgcagttat agcagaagat ccagattcaa tacaaagata cggaatagtt gaagatgtta
    22561 taaatgtaga atgggcacca aacactaaca tcgttaatcg ctttgtatca gaacgtctcg
    22621 caactacagc acttcctaaa attgtgtata atgctaatac tgtcactcta ccaggtaaaa
    22681 tatttctacc aggtcagata ataagcatag aagacaaatt gtccgaccta cctaacaatc
    22741 tcaatattcg cgctgacata ttagctgtaa gatataattt cggtggtgct tcagcagaat
    22801 ttggaggaca attaggcgct ttattcacag atatatcacc cgttggactt tatgattttc
    22861 gacaagaaga ggaagaaacc taataatgat agtagaagac gttgaagcta aagtagaata
    22921 taacgatatc acacaaattg taaagtggaa acctgaagac tgggacacag tcaataaaca
    22981 tttcatatgg actagagagg caaaggaacg caaggacaag aagatactta agcaattaat
    23041 cgatgctgta gattatacaa ttgagcatgc taaagctgga gaatctactc acagcgctca
    23101 acctttagag gtagtagaga agaaagatag aattgtagca gcgggaaggt caagagctgc
    23161 cgaattaatc acgggtgaaa gtaaagccac atttgacaat atggctatag gactatcaca
    23221 gataccagct caagattctg atttcaaact ctatgaagag gttggtagag tatcatcaca
    23281 actaacaggg tttgttggtg ctgctggttc agtcataaaa cacgttgcta cattcagccc
    23341 ttcatttcct agtaatacat actgggaagt tgcacccgtc gataccgacg tagaaagcga
    23401 tgatcaagca attttcgcta gagtagtatt ctcagcagat agaccagcaa tccatgtagc
    23461 aggcgaagac ttctttacag tacatcattc aacgttcacg agtagtggtg cctaagaaat
    23521 gtcatcatta ggcggcggct tctctcagat gcggcgtcgg tcgcatgcac aaaataagat
    23581 tactcagtta gttagagaat ttcagagatt cacagcgggt cagataaaga tcgaaaatcc
    23641 cgactttaga actctgaaca gaactgcatc ttcaaggatg aaatacagcg atcccttcgt
    23701 ctttagcaag aagaagtcag tatttccctt gtttatgatg ccatttgaac cagacttcaa
    23761 ccatacagca ctaatgctaa gaatggatca tttaggtcgt ctatctaaag attcatcagg
    23821 gttcggacat catgctataa tttacggtaa tcaagaatta aagcagggta tagacacggg
    23881 taatggtcct tcgctttatc agaatttcga cggagcttct acatatctgc aagtaaaaga
    23941 cagatacaat ctacttaata gttcaatata cactactggt ttatcattag cagctcgaat
    24001 atatcctgaa gatcttactt ttacgtcggg tgatgacaca aagcctagaa ttattctaag
    24061 caagcatgac gatgcgagag gtctttatgg gtatgtgctc ggtgtttggc ctgatggtag
    24121 tttgcaatac acgttcactc gtggtggaca accatattca gttgcaacac ctcccgacac
    24181 tatcaaacta gatacatcta cagaattacc cgatcaaact ttagcagaga aaacaacacc
    24241 ccctccccca cctctacctt atgatatcac agtagcagaa actatcaatc ctggtatacc
    24301 acagcaagca gctttcgtaa atattgttgc taaccaattc cctgcttcta gttcaggtgc
    24361 gggtactgat ccgctcggtg tcaagatgtt atatccaaca aaaacatcgg gtcaaacctg
    24421 gtattctaat aatagtgcaa tagttaaccg tactgattca cgtgtcttat atgctgcagc
    24481 tttagcgcct ggagaagtta cattaaattc tgatggttca ataaaagtca ctaaagctgt
    24541 agatgcagag aacaggttct atattacacc gactacaggt tatgaccata ctctatgttc
    24601 tcagagttgg tcgactaact caagtagggg atatatgcaa aatgcccagg attggagaaa
    24661 tgttgagatt actgcccacg ttaggataaa ttccgtatgg tctaccttag gacatgctat
    24721 agtttggtat gtccgtggtg gtcatcattc aacgacttac ccatgtgaag gatcggcata
    24781 caaaggaaac ataatgtatg ctgatgcgtc gtcacgcttt cagaaagaaa tggctcaccc
    24841 gaattattac ccgactacaa acaagacaac aggtctagca aataatttcg tgggtcgatg
    24901 gttcggttac aaattcgtct gctatgatat gacagacgga aatgtaaagc tagagaactg
    24961 gttagacctg aacctagacg gcaattgggt taaagttgat gaacgtatag attcaacggg
    25021 gtggggtgta aatcctggct gcggtggttc aacagatcaa aagttcaatt ggggaggtcc
    25081 tcaagttgcc ttcagattcg atgcagctaa agacatagat tttaacaaaa tgtctgtaag
    25141 ggaaatagat gcaacaggta caggcggcgt agttactccc tctcctccaa caggtgcggg
    25201 agtagaccca tttggagtac agaaattata cgctgacgat cccgcaaagc ctaatcattg
    25261 gtatatggga agtctaacgt ctgacccgat ggttaactta tcgggttctg cttctaacct
    25321 agggagcggt gtatgggaag gacatgtgac cacatcggac aaccccgcta gctttagaat
    25381 taatgtaaag acaaaatcat gtcaaagcga tttctctgat tcattacaag caaaacacgg
    25441 tgaagattgg gtattaagag aagcagacgg ttatacctgt aaacctgatg attggcgtaa
    25501 cgtagagatg acaatattct ggtacgttac ccaatgggac gcggcagacg aaatgtcgcc
    25561 ctatgtcaga gggggtagtc atcatgatgg ttggccaatt gcgtgtatag ccacggaata
    25621 taaaggtcag atacaaaagg caggaaattc aagatttgct aaagaatttc atcatttatc
    25681 aggtagtacg ggttatgcat tctatagcgg caatccgaag tttacgctaa ctgatagaac
    25741 aaacaaatgg actggtcata agttcgtttg ttatgatttc gttagagcaa cagacggcaa
    25801 gaaatgtgtg aaaatggaag tctatgctga aacatcagac gaaactaacg gtaatcctac
    25861 gacacaaaac tggagactga tgaatgagtt agtagacgat ggtactctag ctgattgtcc
    25921 tgagaagggt tatgtttcta attgcaatgg aattgcaaaa caagttttta gatgggggtc
    25981 agggatgtcc actttccgta tagacaacgt aattgtgagg gtcaagaagg cgtctatacg
    26041 aaatataatc gcaacacctt cctcaactcc cccacctcct acatgtccaa cagggcaaca
    26101 ttgggattcg acacttcaat tatgtgtggc tgatactgtt accacaccac cccctacttg
    26161 cccaacaggt cagcattggg acgttacttt aaatcaatgt gttgccgata cggtaacgac
    26221 acctccccca cccccaccaa cagggggagc gggcacggat aaattcggtg taaagatgat
    26281 ttatccaact aaatcactag gtgatacttg gtttctaaac gcaaaccctg gtcacgtatc
    26341 tggagataca aggttagtaa gtaatgctgt ggtttcattt cccgctccag atattatgtc
    26401 atttacagcg gcgaatatca ggtggggtgt tactataaca ggtggatata atcaagcaat
    26461 tacatttact gatcaagtcc aattaagaca gcgcaagtac atgcaatctc ctaaagattg
    26521 gacaaataca gagatgacgg gttactttaa tgtccgacat caaacgggag cgacatcaaa
    26581 cggcggcgtt catatagaaa tgagtgttag gggtgcatgg cataccactt cgatcccctg
    26641 tttaggtaca ggttaccata tgaacgcata tccgaatgga cagattatct tcaagaagga
    26701 attatctaat gaagaatata cttttaacaa tcccgtgaaa gagggtgcta ctctgaattg
    26761 ggttagcggt caatggtttg gtctaaagat ggttacaaga tcaactaaca cgggtactgt
    26821 aaagatagaa gcatggcttg attccgttgc taataataca tggctgaagg tatttgagac
    26881 agaagatgcg ggtacatggg gaggcgctgc gaacggctgc ggcggcagtg atcacactat
    26941 cataaattgg ggaggtccaa tcgcaatgtt ccgtattgac aatattgacg atatgcaggc
    27001 taaatggtgg tccgtacgtg aaattgatgc gactacatct acagcacaac cagtaccaga
    27061 tcctacagat cccgtaacat taccaattac atgtcctcca ggccaacaat gggacgaaac
    27121 acttcagaaa tgtgtatttc caaatgagca aacaccacca cctgcagggc atgtaaacca
    27181 atttggaatc agggaattct ttgcagatcc cgaaacacct agattctttg acaaatatac
    27241 aaactcaggt attcaaggct caaaggacac gccatacaga tataatttca acttgcctat
    27301 ggattgtgta agtacagaat tctcaggttt gattaaagtc actacaaaca tacaggaaca
    27361 tatcacaatc aaactaggtg gtggaattca tacaacaaaa cagaatatgg acggctgctg
    27421 ctatgatatg ggactgccaa cacaaggcca atcaccttta ggtagactat tacggaagga
    27481 atgtccacac cctgaattct cagattgttc accactagta agaccattat ttacgttacc
    27541 aagtatttac aaccttgaga taggagtagc agtaatcaag gtcaatatgc ctaatccttc
    27601 taaagatgtt ttactacaat gctggattaa cctaacacca actacaactc caggaggtaa
    27661 tacaatgaat aataatacat ggcagaaata ttgggaatat attgatagag gatcatgctt
    27721 tgatcacccg ctaagagaac cgctaggtag ttctagacaa gatttagtga tggtcgataa
    27781 tgctacttat acaatgagat ttccgtctat cagggaagtt atacctatct caatagcttt
    27841 atcacctcca gatctatgca acaaactatc aatagcgaga gtaacagctt cagggtttga
    27901 ttcacaaaat ccacctgcta atacaataga taacaaagcg actaccagat ggtcttcgct
    27961 aggaataggt caatggattc agtttgacct aggagcaaca agcaacctac taacagtttg
    28021 tagcgtagag attgattggt atcatggaga tgatagacag tatagcttta gtatttccgt
    28081 atctttgaac ggtcagttct ttaccgatgt gttcgcaggt aagaacacta gaggcacaga
    28141 aacttatgtt ctaagcaggc agataaacac caatgctaga ttcgttagaa ttaccgttaa
    28201 cggtaatact gtaaatcaat gggcttctat agaagaggtc aaaattagag gatatgctaa
    28261 tgttggtaca cctggtcctt ctgatcctcc tagttgtcca caaggttaca catggaaccc
    28321 aataaaacag atatgtgata attcgccaaa tccccctcca gtacagcaat gtttaccagg
    28381 aatgcattgg gattctaacc tacaagtatg tgttcctaat aatcctctac caattacaag
    28441 tattgtgcta gatttagcag ttaacaacac gcattatacg actacaggaa tagatccttc
    28501 agatgagaca ttactaccaa gtggcaagca tttccaacta tcgtctaatg atactgatag
    28561 agcatttcga gtaggtactt tgatacatga cgtaaataat ccaatgcatt acaaatggaa
    28621 aggtggtatt caagacgtaa gggtatatag agagtatatc gttagttcaa ttgagacaca
    28681 gaatttgtat cagaataaga tgagcattag agcgattcca ttcggtcaag tcgcacttgc
    28741 tggatttgca tcattattaa cttctcaaac ttcttcaggt ggatttcact taacaggatt
    28801 tcatgcaaaa ggttatcatg taggacagac ggaaggcgtt gcaacagata cgcaaacatc
    28861 gagtgatgat atttagtaga gatagtagac atgagtagcg aactaccaat cacgcaaatt
    28921 actgttcctg agtatggctt acccttcgat gcaattaatt ggcaattatc tgcggccaaa
    28981 cttaatacta aaacaattct agtatgtgat gcagattttg cagcagctta cggcgctcag
    29041 ctaagaggta tgatggtcag aattataggc acgaaaacta atggtatatt ctcacctgat
    29101 cattcatact tttggagtgc tgataatact cgctggattg aagatacagg cattgagcat
    29161 cttcataatc tcgacacaga cgaagcggga ggtctatacc gaaatgtcct actagctaac
    29221 atatcaaatt attatgagac tgatatctta cacccttcag ctaatcgatt tgttgtaact
    29281 gtgcaaggta gtgccgtaaa cacaacggct aatggtgttg agttagtaca aacaaccaca
    29341 gctaatgatt ttgctcaaat tagattacct gggggtgctt tagatctcag gaagaagtgc
    29401 gctttctcaa tatcaggtta tgctaattca ggtaagaaca tgacagcaaa actaggcgta
    29461 gctatggaaa acgtcggatc aactgaagcc ttaacgccta gatttggcct tgaggtttgc
    29521 gatatttcaa acactcttag aacttggaac gttgttagcg gagatggtac agcgtggaat
    29581 atggaagcat cttctgaaaa cgtagaacga acaacacccc aagctattta catggaactc
    29641 aacccactac agaacgttaa attcacaagg acagatgtta ataatttcga cgttataaca
    29701 gtaaagactt ctaatatacc agggactagc caaacagcaa taggtaatgt ttggggtcta
    29761 ggttataaaa ctaatgaggc tgtcactaaa acattcttcc tcaattctct gcgtatatta
    29821 ggcaaattac ccaaccactt cctagcacct gcgcaattgg tcggagcgac ttaatcttat
    29881 aatggctaaa tggaattata aagttcgact gaagattaat agattctatg tagctcaagc
    29941 ttttaaccca gttaaagggt atgatgtaga attttacgat tggaattata acggcacaga
    30001 atgtacagct tcatttgttt gctcagatga ttattctaat cctattgaac gacacacaaa
    30061 agaggatatg gaagaatatg ttatatcgaa atttggagca aatatcataa aggactggtc
    30121 cgctagggaa gataagaatc tagcaggtaa taatacacca atcaataacc cattattaga
    30181 ccgatataga aaagatactt acaagtcata ttacgattta ttagtcagta aagagcaatt
    30241 agaagagact tcgcgcgcgc taagtcatgt tttaccagcc ttgaaggggg ttcgtcatat
    30301 ttcccctttt aaggttgttt ctaactcttc gtataaacct gataactatg tagtgagaat
    30361 aggacaatgg taagcagtaa cgcagatcta aaattctact tatcaggtac gggtaataca
    30421 aatccattca atagttatgg tggtcccata tcttcaactc aagtacaaaa tgatcagcta
    30481 gagaatctat ggagtaatat tttaccttct gagactctag taactggatt tgtcgattac
    30541 cgagctatat atgtcaagaa tacaaatcct attgatacta ttagcaatat acacgtctat
    30601 tgggcgatcg acgatccttt tacggattta gaaataagtc atcgtggcgt aaatgcttca
    30661 gttgatagat tagcaacacc atttacagaa ccctcaacta ttgaaatagg tgttcctcca
    30721 actgctgcta caactacaac tgcagttact aatgtaactc cagaaaacac aaacagtttt
    30781 ggtataaagc aattctacca agatcctgct actccaagat actatacagc tttcacaaat
    30841 acgggagtaa tggcttctat cgacggctat agatacaatt ggacaattcc cgttaatcta
    30901 gtaagtgttg aagttggtgc actcataaag attacaactc cagcgacaac agcgagcaat
    30961 tcattcattt ggtttaaaat ggggggaggt ttgcataata ccacagtacc taatgatgca
    31021 tgttgctacg tcgtgggtat accacaaaca gggcaacccc ctgctactaa tctactcagg
    31081 aaggaatgtc ccttcaagtc ttatcataca tgtgcaacgg tagcgccatt atttacatta
    31141 ccaacactta cgaatagaga aatcggcata gtatgtgtta aattaaatca gcctcctaac
    31201 gttttccttc aatgctggat aaatcaaact ccagtaaatg cacaaggaac aattaacaat
    31261 gatacatggg tcaaatacat ggaatataat gatactggag gctgttatca atctccatac
    31321 ttgaacccag cgggtgctag tcgacaggaa actatcagag ttgataattc tacttttaca
    31381 ttaagatttg gaagtactcg tgaaattgtt gcttctgctg cgggtaatcc tggaggacca
    31441 accatttgtc ccataggtca gcattatgat accgcattac aacgatgtgt ccctgatgat
    31501 gtgggaagcg taccaaatcc aattacagat ccctggagaa aagcgacaaa tagttatgct
    31561 acaactggag ctataatacc gtctctacca gctaatagtt ttataggtat ctggttaaga
    31621 agggttatac ctcctaacgt tagcaatctg tttattgact cttcggagtt ggtagtagat
    31681 ggttcgggag taggttaggt agtgataata taataaaatg acattaacag caacagattt
    31741 aaaattctac tattcgggag gtgctacaaa ctccgatcca aatggagatc agggaggtac
    31801 aattagcagc gttcaagtcc ctgagcaaat tctgtctaca actccctttg tgaagaatac
    31861 gatgttaaat gatgtatctt caactaatag aatagcaggt gtaactcaat acagatgttt
    31921 ctatctgaag aatactcatg caacacaaac agcgagtaat atcaagatgt ttaagaatcc
    31981 cattaccaat atgcccgata cggtttcgat tggttatagc ggtaatgccg taaacacccc
    32041 tgaacaaact ctaacctcta cagcttcaaa agtgtatgat gtagcagtaa ctactagtga
    32101 tggtgtacta gataatacaa gaccgataag aggtgaacga gtaacagcaa cgacttccgt
    32161 aatctataat gttccaatct ctcaagtttc tctgtatcta aagcgaacag gaaaccctac
    32221 aggaactttc tatgtaagac agcgtgcttc tacaaatgat aatgtatcag gcgcagcttt
    32281 agcggaaata ggttctatgg acgttgcaac aattgcaacc acagcaacca aatatacatt
    32341 tactgccaca acacctagag ctttagctgt aaacgatgcg ataacctacg aatatgctaa
    32401 tggtacatct tccaactaca tatcagtatt cagaaataca gccgacccaa ttgcaggaag
    32461 ttatgaagtc tatcatgacg gaaccagttg gcataataac agtacttatg atacctgcgg
    32521 tgaagtatgg aaggcgggtt tacaagctga tagaacagct ccgagcggag tgacttttgt
    32581 taatcctata gatttagctt ctgctatatc attgcctaac ttagcacctt cggcttatat
    32641 tggctgttgg ttcaaaaggg ttgtaccagt aaattgcagc gcaaaagtcg gtgataattt
    32701 tcagatcgca gtacagtttg agagtcctaa cccatgattt tgtctactag tagactgaat
    32761 gacagtaata taattatgaa aaggagttat agtattaatt aaaatggtac aaggtcaaga
    32821 cggcgtaaga ctgatttacc ctagtacgac tggaggggaa ttctggttta tcaacattgg
    32881 taatctccat aatgatccta gatttatccc aagccatgtt ttagacggag atgaagagat
    32941 agggttcaaa gcatttggtc aattcgtttc aatgtgggct aaaacctcaa ctggttttac
    33001 ttcaggaatt gtaccttcca atatagatca tggacagcta gcttc
//
LOCUS       DASQJI010000567         5562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2221389,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000567 DASQJI010000000
VERSION     DASQJI010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5562
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2221389"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VEV83_15510"
     CDS             <1..541
                     /locus_tag="VEV83_15510"
                     /inference="COORDINATES: protein motif:HMM:TIGR04191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HYK46583.1"
                     /translation="DSLIGNSGPSYPEQIAAPYRKELTNNGFTQMLTPEDVDAALNRN
                     DGKVLLVVLNSVCGCGARVARPGALLSLFNEKVPDERFTLFAGMEKEAVGYFREKYLA
                     GITPSSPNIYLFKDGDLIFILHRYEIERSAAGNLAEALMNKYNEVCTKENEEASVQPL
                     RQFFIDHYDFDPLKAEQEG"
     gene            621..1076
                     /locus_tag="VEV83_15515"
     CDS             621..1076
                     /locus_tag="VEV83_15515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HYK46584.1"
                     /translation="MKITAQEEYGLRILIRIARCGDEDGMSIPQLSDSEGLSAHYVAK
                     LTRQLRIGGFLKSTPGQKGGYVLSRPACDININKVLKTLGGALFDNEFCASHIGALNL
                     CTNSVDCSARSLWKIIQFTVDQLLDKMTLEDLCGKERESVSKLHTLLMQ"
     gene            complement(1122..2003)
                     /gene="dapA"
                     /locus_tag="VEV83_15520"
     CDS             complement(1122..2003)
                     /gene="dapA"
                     /locus_tag="VEV83_15520"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HYK46585.1"
                     /translation="MAALKDILSGTGVALVTPFQKNTDIDYNALERMINFVIEGKVEY
                     IVTLGTTGETPTLRTPEKKDVIKYTYEIVKKRVPIVVGIGGNNTHELVKELETFPLEK
                     ATAVLSTSPYYNKPSQEGLYQHYKTLAAASPKPVLLYNVPARTSKNIDAATTLRLANE
                     VENIAGIKEASGDMAQCMKILRDAPKDFLIVSGDDALALPQIACGMKGVISVAANCFP
                     KEFSNMVRCCLDGDFKKAKGINDELIKAYELLFAENNPAGVKAFLAEMGLIKNYLRLP
                     LVPLSHGLQKQVKTHLH"
     gene            complement(2102..2824)
                     /locus_tag="VEV83_15525"
     CDS             complement(2102..2824)
                     /locus_tag="VEV83_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HYK46586.1"
                     /translation="MGRIFEVRKATMFARWDRMAKQFTRIGKEIVIAVKAGGPDPAIN
                     PALRRCMQNAKSVNMPKDRVEAAIKRAMGKEIANYEEILYEGYAPHGVALLVETATDN
                     HVRTVANIKSIFNKGGGALGNSGSVSFQFRKMGVFKLKPDGLNVDELEFELIDFGLEE
                     MGESTDEHGNTIVVLRCAFVDFGKLQKALEDRNIIPVSAEIEWIPSNTVPVSEGQAED
                     VSKLIERLEQDEDVSKVFHNMA"
     gene            complement(2889..3953)
                     /gene="rlmN"
                     /locus_tag="VEV83_15530"
     CDS             complement(2889..3953)
                     /gene="rlmN"
                     /locus_tag="VEV83_15530"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HYK46587.1"
                     /translation="MILTQENIRNLSLAELENYFSEINEKKFRALQVYQWLWQKHAGS
                     FEAMTNLSKDLRQKLAEHFTLPALTINTTQHSSDGTVKTRFKTFDDHFIEGVLIPTEE
                     RKTACVSSQIGCSLTCSFCATGRMMRVRNLAFDEIYDQVALINEQAERIHGKRLSNIV
                     FMGMGEPLLNYGNVLRAIERISSEDGMGMSQRRITVSTAGVSKMIMKLGDDKVKFKLA
                     LSLHAANDKKRNEIMPINESNNIRSLIDALNYFYRQTKNEITFEYILLRNFNDGQKDA
                     EELVKIYRQVPADLVNIIEYNPVDGANFSKSGDETTEHFLKYLEANRVNARLRRSRGK
                     DIDAACGQLANKDNHEAMKA"
     gene            4070..>5562
                     /locus_tag="VEV83_15535"
     CDS             4070..>5562
                     /locus_tag="VEV83_15535"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HYK46588.1"
                     /translation="MKWLIAALLLADSISAAGLPVVPLRKGLVITSSVTISRESYFLT
                     ADTSLEMPLIIIRGKHLTVDFNNCILQGSADKKFPNEFFGLAVLVEKGSSNIIIKNAN
                     IHGFKIAIMADSVEGLQIESCDLSYNYRQHLHSNWEREDISDWMSYHHNEQDEWMRYG
                     AGIYLKDCDHAIIKNNFISGGQCGLMMMRCDSNEIYNNNFSFNSGIGIGMYRSSFNKI
                     YANVLDFNVRGYSDGIYNRGQDSAGILMFEQSSNNEIGYNSVTHGGDGFFLWAGEHTM
                     NTGKGGCNDNFIHENNFSYAPTNGVEVTFSRNTIKNNIIEECDNGVWGGYSFETEILA
                     NAFANNKTAIAIEQGQNNSIITNLFQKNNTAIKLWSRPSQPADWGYARSKDVSSKNYK
                     MLSNTFIENGTAFEIMGTDSLLLEDNTVNKTRIVYKIGARTKRLDTGRIFLDDTTLTV
                     TLEDLKKFFSNRIPKTNVFEGRNQIRITEWGPYDFRYPLLWLKNVDS"
BASE COUNT         1480 a         1245 c         1175 g         1662 t
ORIGIN      
        1 tgatagctta attggaaaca gcggaccaag ttatcctgaa caaatcgctg cgccttatag
       61 aaaagaatta actaataacg gatttacaca aatgcttacg cctgaagatg tagatgcagc
      121 tttgaatcgc aacgatggca aagtattgtt ggtagtatta aattctgtat gtggctgcgg
      181 cgcaagagtt gccaggccgg gcgcgttgct ttcactgttc aatgagaagg ttcctgatga
      241 aagatttacg ctattcgcgg gaatggaaaa agaagccgta ggttatttcc gcgaaaaata
      301 tttggcaggc atcacgccaa gttctccaaa catttatttg tttaaggatg gtgacctgat
      361 ttttatcctt catcgttacg agatcgaaag aagcgccgca ggcaacttag ctgaagcact
      421 catgaataaa tataacgaag tgtgcacaaa ggagaatgag gaagcgtctg tgcaacccct
      481 tcggcaattt tttattgacc actacgattt tgatccgttg aaagcggagc aagagggttg
      541 atatgatgac aagtttatcg gttgataagc gttaacagac tttcgcaact tttcaaccga
      601 tcaagattta aactaaagaa atgaagataa ccgcgcagga agaatatggt ttacgcattc
      661 tcatccgcat tgcacgttgc ggcgatgaag acggcatgag tataccacaa ttaagcgatt
      721 cggaaggatt gagtgcgcat tatgtcgcta agcttacgcg gcagttgcgt atcggcggtt
      781 ttctgaaaag cacgcctggc caaaaaggcg gttatgtttt atcaagaccc gcgtgtgata
      841 tcaacatcaa taaagtattg aagacactgg gaggcgcact gttcgacaac gaattttgcg
      901 cctcacatat cggtgcgcta aacctatgca ctaattcggt tgattgttcc gctcgctcgc
      961 tgtggaagat catccagttt accgtagacc agttattgga taagatgacg cttgaagatc
     1021 tttgtggtaa agaaagagaa tctgtaagta aactgcatac cttactgatg cagtagttcc
     1081 cttagttgct cattgtggat gttagttaca tcgtacagtt tctaatgcaa atgcgtttta
     1141 acctgttttt gtaggccatg gcttaggggt acgagcggca atcgtaaata atttttgatc
     1201 aatcccattt cggcgagaaa agctttaacg ccggcgggat tattttcggc aaacaacaat
     1261 tcatacgctt tgatcagctc atcatttatg ccctttgctt ttttaaaatc accatcgagg
     1321 cagcaacgca ccatgtttga aaactccttt gggaagcaat tcgcagcaac actgatcacg
     1381 cctttcattc cgcatgctat ttgtggaaga gccagggcat cgtcgccgct cactataagg
     1441 aaatcctttg gtgcatcgcg caagatcttc atgcattgcg ccatatcacc actcgcttct
     1501 tttatgccgg cgatgttttc tacttcattt gcaagccgga gcgtcgtcgc tgcatctatg
     1561 ttttttgatg tacgggccgg cacgttgtat aaaaggaccg gtttcggcga agcggcagcc
     1621 agtgttttgt aatgctggta taatccttcc tgcgaaggtt tgttataata aggcgatgtg
     1681 cttaatactg cggttgcttt ttcaagtgga aatgtttcga gttctttaac caattcgtgc
     1741 gtattgtttc cacctatgcc gactacaatt ggaacacgct tttttacgat ctcatatgtg
     1801 tatttgatca cgtctttttt ctcaggcgtt ctcaacgtgg gagtttcccc ggtggttccg
     1861 agggtaacta tgtattcaac ttttccttcg atcacgaagt tgatcatccg ttcgagcgcg
     1921 ttgtaatcaa tatcggtatt cttttgaaat ggcgtaacca gcgcgacgcc ggtgcccgat
     1981 aatatatctt ttaatgccgc cattgtttgt tattacaatc ccgctaagtt aaactgtcaa
     2041 cggtgaattg tgaattgtga atggtcaaat ccttaatcct aaatcctcaa tcgatgcgga
     2101 atcatgccat attatgaaac accttactca catcctcatc ctgttccagg cgctcgatca
     2161 atttgctcac atcttctgcc tggccttctg atactggcac cgtgttggaa ggtatccatt
     2221 caatttctgc actgacgggt atgatattcc ggtcttcaag cgccttttga agtttaccaa
     2281 agtcaacaaa agcgcaacgc aatacaacga ttgtgtttcc atgctcatcc gtactttcgc
     2341 ccatttcttc caggccaaaa tctataagtt caaattcaag ctcatcaaca tttaagccat
     2401 ccggctttag tttgaaaact cccatttttc taaactggaa acttacactg ccgctgtttc
     2461 ccaacgcgcc cccgccttta ttaaaaatac tttttatgtt ggccacagtg cgaacgtgat
     2521 tatctgttgc ggtctctacg agcaacgcaa cgccgtgagg ggcataccct tcatatagga
     2581 tctcttcata gttcgcgatc tcttttccca tcgcccgttt gatggcagcc tccacccggt
     2641 ctttgggcat gttcacactc tttgcatttt gcatgcaccg ccgcaacgca ggatttattg
     2701 ccgggtcagg ccctcctgct tttacagcga tcacaatttc cttcccaatg cgggtaaatt
     2761 gtttcgccat cctgtcccat cgtgcgaaca tcgttgcttt tctaacctcg aagatccttc
     2821 ccatgatttg tctgccgttt attaatcttt ggtttgcctt tttgcagtct attccatttt
     2881 atgttgtttc acgctttcat cgcctcgtga ttgtctttat tcgccaactg gccgcaggcc
     2941 gcgtcaatat cttttccccg gcttcgtctt aatcttgcat taaccctgtt cgcttccagg
     3001 tacttcaaaa aatgttcagt cgtttcgtcg cctgactttg aaaaatttgc gccatcgaca
     3061 ggattatatt caataatgtt caccaggtca gccggcacct gcctgtatat tttcaccaat
     3121 tcttcagcat ccttttgtcc gtcattgaaa ttcctcaaca aaatatactc aaacgtgatc
     3181 tcgttttttg tttggcggta aaaataattc agcgcatcta tcaaagaccg gatattatta
     3241 ctctcgttga tgggcattat ttcatttcgc tttttatcat ttgctgcatg caatgataaa
     3301 gcaagtttga attttacttt gtcatcaccc agtttcatta tcattttcga aacaccagca
     3361 gtcgatacgg ttatgcgcct ctggctcatt cccattccat cttccgacga aattctttca
     3421 atcgccctca ggacgttccc ataattcagc agcggctctc ccatccccat gaatacgatg
     3481 ttggacaacc tcttgccgtg gatccgttca gcttgttcat ttatcaatgc aacctggtca
     3541 tatatctcat caaaagccag gttgcgaacg cgcatcatcc tgccagtcgc acaaaaagag
     3601 caggtcaggc tgcaaccgat ctgtgaagaa acgcaggctg tctttctctc ctccgtcgga
     3661 atgagcaccc cttcgatgaa gtgatcgtca aaagttttaa aacgcgtttt tactgtgccg
     3721 tcgctgctat gttgagtcgt gtttattgtt agtgccggaa gcgtaaaatg ctcagctaat
     3781 ttttgacgaa ggtccttgct caaatttgtc atcgcctcaa agctgccagc atgtttttgc
     3841 cacaaccact ggtacacctg cagtgcgcga aacttttttt cgtttatctc tgaaaaataa
     3901 ttttctagct ccgctaagct taaattcctg atattctcct gtgtcaagat catccggcaa
     3961 agataagccg aacgcctagt tcctttttgc cggaggttat tataaaaaga taaaatcgtc
     4021 tgggcaagtg aggatcgttt tctgcccgtt cattgactac tttagctaaa tgaagtggct
     4081 tatagcagca ttacttttgg ccgactcgat ctcagccgcc ggtttaccag ttgttccgtt
     4141 aagaaaaggt cttgtaatca cttcatcagt aaccattagc agggaaagtt attttctaac
     4201 tgcggacact tctctggaaa tgccattaat aattatcagg ggaaagcatc taaccgttga
     4261 tttcaacaat tgcattttac aagggtcggc agataaaaaa tttccgaatg aattttttgg
     4321 ccttgcggtg ctcgtcgaga aagggtcgtc caatattatc attaagaatg ccaacatcca
     4381 tggtttcaaa atcgcgatca tggctgacag tgttgaagga ttgcaaattg aaagctgcga
     4441 tctaagctat aattaccgcc agcatttgca cagcaactgg gaacgtgaag acatcagcga
     4501 ctggatgagc tatcatcaca acgagcagga tgaatggatg cgttatggtg ctggcattta
     4561 tctgaaggat tgcgatcatg ccatcatcaa aaataacttt atcagcggtg gccaatgcgg
     4621 cttgatgatg atgcgctgcg atagcaacga gatttacaac aacaatttct cttttaactc
     4681 aggcattggc attggcatgt atcgaagcag ctttaataag atttatgcga atgttctcga
     4741 ttttaatgtg cgtggctaca gcgatggaat ttataaccgt ggacaggaca gtgcgggcat
     4801 tttaatgttt gagcaatcta gtaacaacga gattggttat aactcagtca ctcacggagg
     4861 cgatggattt ttcctgtggg ctggtgaaca caccatgaat acgggcaagg gtggctgcaa
     4921 cgataatttt attcatgaaa ataatttttc gtatgcgccg acaaatggag tggaggttac
     4981 gttcagcaga aatacgatca aaaacaatat catagaggaa tgcgataatg gtgtttgggg
     5041 tggttacagc tttgaaaccg aaattctcgc taatgcattt gcaaacaaca aaactgcgat
     5101 tgcgatcgag cagggtcaaa acaatagtat tatcacaaat ctgtttcaga aaaataatac
     5161 agcgatcaag ttatggtcgc gcccttctca acctgccgac tggggatatg cacgaagtaa
     5221 agatgtgagc agcaaaaatt acaaaatgct atctaacacc tttattgaaa atggaactgc
     5281 gtttgagatc atgggaaccg atagcctcct gcttgaggat aataccgtaa acaaaacacg
     5341 cattgtttat aagatcggcg ccaggacaaa acgccttgac accggcagaa tatttttaga
     5401 tgatactacg ctcacggtaa cgcttgaaga tcttaaaaaa ttctttagca accgcattcc
     5461 taaaaccaat gtttttgaag gccgcaatca aattcgcatc acggaatggg gtccatacga
     5521 tttccgctac cctttattat ggttgaaaaa tgttgacagt at
//
LOCUS       DASQJI010000568        13364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_225382,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000568 DASQJI010000000
VERSION     DASQJI010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13364
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225382"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VEV83_15540"
     CDS             <1..207
                     /locus_tag="VEV83_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HYK46589.1"
                     /translation="ARPTVSKHLQILTECELLQQEQNGREIYYHFNAKKMKEVADFIE
                     PFREMWDERFNKLETVMKKYKSKK"
     gene            214..714
                     /locus_tag="VEV83_15545"
     CDS             214..714
                     /locus_tag="VEV83_15545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HYK46590.1"
                     /translation="MEHKTKINAEDGKQDLTITREFELPLELLFTAYAEPELVEQWMS
                     NQYSTTKLLKLESKKHGAYQLQSTDPNGNVVFRANGVIHDFLPNQKITRTFEMENTPF
                     GVQLEVYEFEKVTDDTSKLSMHVIYESVAQRDEVLKLPFARGINMAHNRIEEILSKTA
                     QHVSLK"
     gene            852..1295
                     /locus_tag="VEV83_15550"
     CDS             852..1295
                     /locus_tag="VEV83_15550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYK46591.1"
                     /translation="MKKRNKIVYWISTLWLALGMLSTGAVQLLKAKEGQGGGDMLTHL
                     GYPVYLLTLLGIGKLLGVIVLLVPRFPLLKEWAYAGFFFIMSGAIFSHIASGDPINEI
                     LPALLLLTLTLVSRYFRPADRKVNSLTAARANNEALAGDSPLTMA"
     gene            1546..2139
                     /locus_tag="VEV83_15555"
     CDS             1546..2139
                     /locus_tag="VEV83_15555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HYK46592.1"
                     /translation="MTNSEMNPDVDFFFDKASQWQKEYEKLRTIILECGLTEELKWGC
                     PCYTFENSNIVLIHGFKEYCALLFFKGALLGDAEGILIQQTENVQSARQVRFTNVREI
                     VKMERAVKAYIYEAIEVERAGLKVKLKQTSDFKVPEEFQKKLNKNAALKKAFNALTPG
                     RQRAYIFHFSQPKQSKTREARIEKYMQQILEGKGLND"
     gene            2292..2741
                     /locus_tag="VEV83_15560"
     CDS             2292..2741
                     /locus_tag="VEV83_15560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYK46593.1"
                     /translation="MSNNSVTLHRVLKASPEKVYRAFTDSNALASWLPPYGFLCVVHN
                     LEAQVGGSYKMSFINFSTGNGHSFGGKFLELRPNEFLKYTDEFDDPNLPGQMITSVWL
                     NKVLTGTDIKITQEGIPAAIPTEMCYLGWQDSLEKLTKLVEPEIPDA"
     gene            2771..3337
                     /locus_tag="VEV83_15565"
     CDS             2771..3337
                     /locus_tag="VEV83_15565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4256 domain-containing protein"
                     /protein_id="HYK46594.1"
                     /translation="MAKNKNRLSSQQQAELFKTLKGRFEKNMHRHKGLEWSKVQAKLE
                     ANAEKLWSVNEMERTGGEPDVVEYDKMSGEYVFYDCSAESPKERRSLCYDREALNSRK
                     EFKPANSAVDMAAGLGIELLTEEQYRRLQELGNFDLKTSSWVKTPAAIRKLGGALFCD
                     RRYNTVFLYHNGAESYYAARGFRGSLRV"
     gene            3439..3801
                     /locus_tag="VEV83_15570"
     CDS             3439..3801
                     /locus_tag="VEV83_15570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK46595.1"
                     /translation="MEAVIQTKTKEILDHHLSAFIDADVEEIMKGYSERSELLTPQGP
                     VSGLPAIRSFFEEVFKIVPKGSTLDLKQEIIRDNIAYIVWAGESALVSIPMGADTFIM
                     DGDKIIYQILAAHITPKQ"
     gene            complement(4125..6125)
                     /locus_tag="VEV83_15575"
     CDS             complement(4125..6125)
                     /locus_tag="VEV83_15575"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HYK46596.1"
                     /translation="MKRISCISVFCFVLQHFVNAQPVCDSNTFQSVYWNAGVHDTYVT
                     NMYVSPSFNVYMCGYTNSAVNKSVDAWIMETTARGNVLWSRAIGTPASETINGIKRTS
                     DNGFLIFGGTRVNSKYDEGWLAKTDPEGRVQWSVRLGASWSNIYQVVELADGGYAAAG
                     GLFLDFDGDGAGNVTDIRKSTNIVLRFDKNGNTLWWKSFYWDDLQKLNTVSQLSDGNL
                     LVAGNIFDQTNAYVIKMNLQNGNIIWMNGFEHASVHRFSHATELPDGTIQLVTANKYY
                     YFTADGKYLPGKSIILSSKGVDYDDAKPEQMTSISAGVDIYFANVSPKPVLFAVKNDS
                     AIIWAHTFNQTSAKITSFHGGKVLGKGIFMAAIYQTDNLSDGTKDEQLSYLIKADANG
                     KTLCADTFDISMRTEPLPALPNISHDWVYEGSLNPQFMQVYLEEMQPMRSGDCFTQTC
                     CKDTITQKEDFICEGSDYRLPDGQLVKDTGRYVAAFNTITGCDSIIHTHLGFKKIFNF
                     SLGSDTCLLDNSSVTFNVPPDTSVRYRWQDGSGGYAYTANFPGEYWATATSYCNIARD
                     SVKVFDECRQPVYLPSGFTPNKDGLNDVFRIANINSQHLLNFNVYNRFGQLVFATDDP
                     QKGWDGTFKNNPQPSGAYVYFVRYTDLQHNPHMLKGTVVLIR"
     gene            complement(6427..7522)
                     /gene="prfB"
                     /locus_tag="VEV83_15580"
     CDS             complement(join(6427..7461,7463..7522))
                     /gene="prfB"
                     /locus_tag="VEV83_15580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_131330388.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HYK46597.1"
                     /translation="MTQEKLNDMRSRLAGIRRFLDVDNRTQKIENDRQLSLSPGFWND
                     NERATGIMKEIKTNEYWLKLYAQVETAVEDFAVLFDFWKSGDATEQETKLAYDQGLRA
                     LDEAEFKSTLNQPEDELPAVLQINPGAGGTESQDWAEMLLRMYRMYGEKQGWKVTELD
                     FQEGEGAGIKTATIQFDGPFAFGFLKAESGVHRLVRISPFDSNARRHTSFASVFVYPL
                     IDDSIDIQVNPAELEWEFYRSGGKGGQNVNKVETAVRLKHITSGIIVECQQSRTQGEN
                     RELALKMLKSRLYEEELRKRQEAKNAANANKKKIEWGSQIRSYVFHPYKMIKDHRTGF
                     EVGNIQPVMDGELDDFIKAYLMMEKEPVDS"
     gene            complement(7667..8515)
                     /gene="panC"
                     /locus_tag="VEV83_15585"
     CDS             complement(7667..8515)
                     /gene="panC"
                     /locus_tag="VEV83_15585"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HYK46598.1"
                     /translation="MRLFKKIGPVRHCLQKFRDKKYYIGFVPTMGALHEGHLSLIQQC
                     KKLCDLTVCSIFINPVQFNDPKDFEKYPVTLENDILLLERDKTDVLFLPSVKEIYPGG
                     ITNLHQYDLDNLENILEGYYRPGHFQGVCNAVHCLLDIVRPDKIFLGQKDYQQCLVVK
                     KMMDVFFPQMEVVIASTVRESNGLAMSSRNMRLSDAARSKAGAIYEALQFIKNNFRNQ
                     SIGTLKQEAVQNILSAGFDKVDYVEICDAETLKPITVFENDRKLVALAAAFIEDVRLI
                     DNVMFD"
     gene            8626..9441
                     /locus_tag="VEV83_15590"
     CDS             8626..9441
                     /locus_tag="VEV83_15590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HYK46599.1"
                     /translation="MSTKKRILFIATEMSPYLELTEFAEIVNKLAIKCNDNGWEVRCI
                     MPRFGVINERRHRLHEVVRLSGINVSVDNDDYPLQIKVASLPNARLQVYFLDNEDFFR
                     RKYVFQNENENWYEDNDLRTIFFSKGALETVKKFGWPPDIIHCSGWMTGLIPMYLKTA
                     YKREPVFVHSKVVYTIGQNTFKEKLGKSFLEKASIHAGIKEKDLEPYKETTNVALFRG
                     GAYYADAITFGAEKVDKKLVEEFAKAKGKRILPYNKETDLTEYLELYNELASK"
     gene            9449..10894
                     /locus_tag="VEV83_15595"
     CDS             9449..10894
                     /locus_tag="VEV83_15595"
                     /inference="COORDINATES: protein motif:HMM:NF025458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4270 family protein"
                     /protein_id="HYK46600.1"
                     /translation="MNLSVSRAGIFSIFLFLFTIFFACTKISTTDIGSGLIPPVDAVN
                     TTDTVLDVLTKNEGFDTVVVGISDDHALGYINDPLFGATTASINFQLAPPYTPFSWGT
                     TPDSLYLDSVVLCLGYQGYWGDSLPPLAFKVWDMDENATFTNDSIYLNTHTFPKRENL
                     TENGQAKFVDILKLDDPDTLANYPELATYQVRIRLNYDFGLRLLHFDSLTLSNDTNFY
                     RVTKGFIVEPEQTGNALLLVNLLDSNTHLSLYYRMRTPTGFDTVTARFSPNPLTSASS
                     NTILRNYSGTSIPQYFPPNSDAQDSLLFIQTSPGTFARIKIPGLDSLPNVIVHRAELL
                     MEQVPDLSSNYDGYFKAPNLFLAAYSKDSMYRFAVPNDVTFTSSGINRPDLFGVLPRP
                     KTYGGRTISSYNFELTRYVQGIVTRQDSSYDFIVWAPYNYYIRPVEKATFFLPIATPP
                     LNSPAIGRVRLGGGNNSEHKMRLHIVYSPLK"
     gene            10937..12190
                     /gene="metK"
                     /locus_tag="VEV83_15600"
     CDS             10937..12190
                     /gene="metK"
                     /locus_tag="VEV83_15600"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HYK46601.1"
                     /translation="MPYLFTSESVSEGHPDKVADQISDALIDNFLAFDPESKVACETL
                     VTTGQVILAGEVRSKAYLDVQEIARSVIRKIGYTRSEYMFEAHSCGVLSAIHEQSADI
                     NQGVDRAQKEEQGAGDQGMMFGYATNETEEYMPLALSLAHKILIELALIRRENDEVNY
                     LRPDAKSQVTLEYDDNNKPVRIDAIVVSTQHDDFGTEDEMQEQIRKDVIEILIPRIKE
                     KNQQYAHLFTDDIKYHINPTGKFVIGGPHGDTGLTGRKIIVDTYGGKGAHGGGAFSGK
                     DPSKVDRSGAYATRHIAKNLVAAGVCDEALVQVSYAIGVAKPTSINVQTFRTSKVNMA
                     DNEISKVVESMFDMRPYFIEQRLKLRNPIYSETAAYGHMGRKNETVEKTFVSPEGRKV
                     TKNVELFTWEKLDYVDKLKEAFALK"
     gene            complement(12311..12886)
                     /gene="hisB"
                     /locus_tag="VEV83_15605"
     CDS             complement(12311..12886)
                     /gene="hisB"
                     /locus_tag="VEV83_15605"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HYK46602.1"
                     /translation="MSTAKRILFIDRDGTLIHEPVLGNIDDWSKLEFYPHVFKYMNLI
                     ATEFNYELAMVTNQDGLGTAYFPSEHFWPIHNFVIHAFENEDVFFSGVYIDPSLKEEK
                     SPNRKPRIGMVKHYVDNPEYDLQRSFVIGDRITDVQFARNLGCKALWLNNHPGLGLKE
                     IENTEEELRAKALALETTQWKDVYEFLKGQE"
     gene            13022..>13364
                     /locus_tag="VEV83_15610"
     CDS             13022..>13364
                     /locus_tag="VEV83_15610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK46603.1"
                     /translation="MKTSRRTFVKQAGITLAGTALVPRKILATGNATDYIVGIQLYSV
                     RDDLKKDPAGTLKKIAALGYTHVEHAGYENRKFYGYPPNEFKRLLSDLGLKMLSGHNG
                     LDATKWDKSQNE"
BASE COUNT         3886 a         2944 c         2901 g         3633 t
ORIGIN      
        1 gcgcggccaa ccgtttcaaa acacctgcag atcctcaccg agtgtgaatt gcttcaacag
       61 gaacagaatg gaagagaaat ttactatcac ttcaatgcaa aaaaaatgaa agaagtagcc
      121 gactttattg aaccattccg cgaaatgtgg gatgagcgat ttaataaatt agaaaccgtg
      181 atgaaaaaat acaaatcaaa aaaatagaac actatggaac acaaaacaaa gatcaatgcc
      241 gaagacggca aacaggatct aacgataacg agggaatttg agctgccgct ggaactactt
      301 tttacagcgt acgccgagcc tgaacttgtt gagcaatgga tgtcaaacca gtattcgaca
      361 acgaaactgc tgaaactcga aagtaaaaaa catggcgcgt atcaattaca atcgactgat
      421 cccaatggga acgtagtatt tcgggcgaat ggagtgatac atgattttct tcctaaccaa
      481 aagatcacgc gcaccttcga aatggagaac acgccgtttg gcgttcagct tgaggtatac
      541 gaattcgaaa aagttactga cgacacgagc aaactgagta tgcatgtaat ttatgaatcg
      601 gtggcgcaaa gagacgaggt tctgaagttg ccgtttgcgc gaggtatcaa tatggcgcat
      661 aaccgcattg aggagatcct cagcaagacg gctcaacacg tttcattaaa atgacaacca
      721 taagactcac agcgacggac gacgatgcac cgcaaagttt tttcaaccct gcggagtcga
      781 agcatgctgt ctcacagaaa caacttgtca gcttcaaaaa ttaaacattc aatttatcta
      841 aacaatacaa aatgaaaaag aggaataaga tcgtctattg gatatctacc ctttggcttg
      901 ccttgggaat gttatctact ggtgcagtgc aactattgaa agcgaaagaa ggccagggcg
      961 gcggcgatat gctcacacat ttgggctacc cggtttacct cttgacattg cttggcatcg
     1021 ggaaattgtt aggcgttatc gttttgctcg tgcctcgatt tcctttgctt aaggaatggg
     1081 cttatgcggg ctttttcttt atcatgtcgg gagcgatctt ttcacatatt gcctcgggtg
     1141 atcccatcaa cgaaatactt cccgcgctat tgctgcttac gctgactctc gtgtcacgtt
     1201 atttcagacc ggcggacagg aaagtcaatt cgctaacggc ggcaagagca aataacgaag
     1261 cgttagctgg cgactcgcct ctcacaatgg cctaatgcaa tgttggctgg aacaaataat
     1321 ttcgaactct ttggttgttt actgactgaa atccggcgac atacaaacgg tcatttttct
     1381 aagcgaaaaa aatggtcgaa cgtcaaattc gaaatgcggc attaaaaaaa ccagcctatt
     1441 agttggtgaa tgaaagacga taagaacaga tctttatgtt gcgggcaact tcattcaaag
     1501 gttggaagat ggcgtgttca ttccgcatgt taaaaaggta taattatgac aaacagtgaa
     1561 atgaatcctg acgttgattt cttttttgat aaagcgtcgc agtggcaaaa agaatatgaa
     1621 aaactgcgaa cgattatcct tgaatgtggt ctcacggaag aattaaaatg gggttgcccg
     1681 tgctatactt ttgaaaacag caacattgtt ttaatacatg gctttaagga atattgtgcg
     1741 cttctgtttt tcaaaggggc attattaggc gatgccgagg gcatcctgat ccaacaaacg
     1801 gagaatgtgc agtcggcgcg ccaggttcgg ttcaccaatg ttcgtgaaat tgtgaagatg
     1861 gaacgcgcgg tgaaagcata tatttatgaa gccattgaag tggaaagagc aggtttaaaa
     1921 gtgaagttga aacagacttc agatttcaaa gtgccagagg aattccaaaa aaaattaaac
     1981 aagaacgctg ccctgaaaaa ggctttcaac gcattaacgc cgggtcgaca aagagcatac
     2041 atttttcatt tctctcaacc aaagcaatca aaaacgcgtg aagcacgcat cgaaaaatat
     2101 atgcagcaaa ttcttgaggg aaaaggtttg aacgattaga tatttaattt acgaacacac
     2161 gagttatttg catatcggca aaagtccatc atgtgaagcc tcagcgaacc tttagaaaaa
     2221 aattccaaac gccatcaacg gttgttttgc ctgacaataa acatcgttag ctttgaagaa
     2281 aagcaatcca catgtcaaac aacagcgtaa ccttacacag agtacttaaa gcatcgcccg
     2341 aaaaagtcta ccgcgccttt accgactcca atgcgcttgc atcatggctt ccgccatatg
     2401 gattcttatg cgttgttcat aacctcgaag cgcaggtcgg aggaagttac aaaatgtcgt
     2461 tcattaattt ttcaacgggc aacggccatt cttttggcgg aaaatttctt gaactccggc
     2521 caaatgaatt cctaaaatat acggacgaat ttgatgatcc gaatttgccc gggcaaatga
     2581 tcacttctgt gtggctaaat aaagttttga cagggacaga catcaagatc acccaggaag
     2641 gtattccggc tgcaatacca actgaaatgt gctatttagg ttggcaggat tcgttggaaa
     2701 aattgaccaa actggttgag ccggaaattc cggatgcctg atctccatct tcaaataaac
     2761 tttccacaac gtggcaaaga ataaaaacag gttgtcgtcg caacaacaag cagaactgtt
     2821 caagacgttg aaaggtaggt ttgaaaaaaa catgcatcgc cataaaggtc ttgagtggtc
     2881 taaagtgcag gcgaagctgg aagctaatgc tgaaaagtta tggtcagtca acgaaatgga
     2941 aagaaccggt ggtgaacctg acgttgttga atacgataaa atgtcaggcg aatatgtttt
     3001 ttatgattgt tcggcagaaa gtccgaaaga gcgaagaagc ctttgttatg accgtgaagc
     3061 gctgaactcc aggaaagaat ttaagccggc aaacagcgcc gtagatatgg cagccgggct
     3121 cggcattgaa ttattaactg aagaacaata caggcgtttg caggagcttg gaaacttcga
     3181 tttgaaaacc tcgagctggg taaaaacgcc agccgcgatt agaaagcttg gtggggcgct
     3241 tttttgtgat cgtcgttaca acaccgtgtt cctgtatcac aatggtgcgg aatcgtacta
     3301 tgccgccagg ggatttcggg gctcattgag agtttgaaaa aattttccgc aaaaccgcga
     3361 ggggatttcc aatatccttt cactttgcat ttgggttgat tcttactttt atcaatacac
     3421 aaaaccaaaa ctcactttat ggaagctgtc attcaaacaa aaactaagga aatattagat
     3481 catcatctat ctgcatttat tgacgcagat gtggaagaga tcatgaaagg ttattccgag
     3541 cggtctgaat tattgactcc gcaggggcca gtaagcggac tacccgcgat ccgttccttt
     3601 tttgaggagg tcttcaagat agttccaaaa ggttcaacgc ttgacttaaa acaagagatc
     3661 ataagagata acattgccta tattgtttgg gccggcgaat ctgctttagt gagcatacca
     3721 atgggtgctg acacttttat tatggatgga gacaagatca tctaccagat cctggcagca
     3781 cacattactc cgaagcagta atcatttgtc gatttagctc tcacagattt tcaaagataa
     3841 cacggatttg aaatcgatat cagtgcacct ctgtgcgatc taggagagat ccaactgttc
     3901 gagttagcgg ttaatagttg tcacaggttt tcgcagataa cgcggattta agaatcgata
     3961 tcagtgcaca tctgtgccat ctgtgagaga ttcaactgtt cgatttaacg gttaacagtt
     4021 ctcacagatt ttcacagata acacggattt aagagatcaa tatctgtgtg catctgtgcg
     4081 atctgtgaga gatccgatgc gatctgtgac agactcaact gttctcacct gatcaaaact
     4141 accgtgccct ttaacatgtg tggattatgc tgcagatctg tgtaccgtac gaaatagaca
     4201 tatgcgcctg aaggctgcgg attattttta aaagttccgt cccatccttt ctgcggatca
     4261 tctgttgcaa acaccaattg accgaacctg ttgtatacgt tgaaatttag aagatgctgg
     4321 ctgtttatgt ttgcgattcg gaaaacgtcg ttcagtccat ccttatttgg ggtaaatcct
     4381 gagggtagat agacaggttg tctgcattcg tcaaatacct tcacagaatc ccgcgcaatg
     4441 ttgcagtatg aagttgccgt cgcccaatat tcacccggga aatttgctgt atacgcgtat
     4501 ccacccgagc catcctgcca tcgatagcgc acggaagtat ctggcggcac gttaaatgtt
     4561 accgaggaat tatccagtaa acaagtgtcg ctgcctaacg aaaaattgaa gatcttctta
     4621 aaaccgagat gcgtgtggat aatactgtcg cagcccgtta tcgtattgaa tgcagcgaca
     4681 tatctgccgg tgtctttcac aagctgtcca tcaggcagcc tgtaatcaga tccttcgcag
     4741 atgaaatctt ccttctgcgt gatcgtgtct ttgcagcagg tttgtgtaaa acaatcaccc
     4801 gatcgcattg gctgcatctc ttccaggtac acttgcatga attgcggatt taatgatccc
     4861 tcataaaccc agtcatgact aatgtttggc aaagcaggaa gcggttctgt cctcatcgag
     4921 atatcgaaag tgtcggcgca gagcgttttg ccgttggcat cagccttaat aaggtagctt
     4981 aactgctcgt ctttggttcc gtcggataaa ttatctgttt ggtaaatggc tgccatgaat
     5041 atcccttttc ccagaacttt tccgccatgg aagctggtaa tcttcgcact cgtttgatta
     5101 aatgtgtgtg cccaaattat agccgaatca ttttttacag caaacaagac gggctttggc
     5161 gaaacgtttg caaaataaat gtcaacgccc gcagaaatgg atgtcatctg ttcgggtttt
     5221 gcatcatcgt aatcaacacc ctttgaactt aaaatgatcg atttgcccgg caggtatttc
     5281 ccatctgcag tgaaataata atatttattt gcggtaacca actggatcgt gccgtcaggc
     5341 agctccgtag cgtggctaaa ccggtgcact gaggcatgtt caaatccgtt catccaaata
     5401 atgttgccgt tctgaaggtt cattttgatg acgtacgcat ttgtctggtc aaaaatgttg
     5461 ccggccacga gcaagttgcc atcgcttaac tgcgagactg tattaagctt ttgcagatca
     5521 tcccaataaa atgatttcca ccaaagcgta tttccgtttt tgtcaaacct caagacgata
     5581 ttggtagatt tccggatgtc ggtaacattc ccggcgccgt cgccatcgaa atcaagaaac
     5641 aacccgccgg cagcagcata cccaccatcg gccaattcaa ccacctggta tatattactc
     5701 catgaagcgc cgagcctgac cgaccattgc actcttccct ccggatctgt cttcgcaagc
     5761 cagccttcat cgtatttact gttgacccgc gttccgccaa agatcaggaa gccattatcg
     5821 gaagttcttt tgataccatt tatcgtttca gacgctggcg taccaattgc ccggctccaa
     5881 aggacgttac cccgtgcagt ggtctccatg atccacgcgt caacactttt attaacggct
     5941 gaattggtat agccgcacat atatacatta aaggacggag aaacatacat gttggtgacg
     6001 tatgtatcgt gaacgcccgc attccaataa acgctttgaa aagtgttact atcgcatacc
     6061 ggctgcgcgt tcacaaagtg ctggaggacg aaacaaaaaa ccgatatgca agatatcctc
     6121 ttcatgtggg cggtggcttg cagaaaaaaa gcagctacgg ttggtgaata taaaacaagt
     6181 tttccgcatc tcctaccgtc attcaacgga tcttgtgcag gcgccgctgc tgcacggaac
     6241 tgtcagatct aagttttcga ttcaaagcaa acgcaaaaac ttccagtaga gagtcaaaca
     6301 gagaaacacg atgtgtcgtc atcgatggta aatcttgtca actttccctt tcctgtaaca
     6361 ggatccctgg taggtggaaa ttaatttttt agcttcaaaa aaagagctac atgataacag
     6421 aagaaattag gagtcgactg gttccttttc catcattagg tacgctttaa taaagtcatc
     6481 gagttcacca tccattacag gctggatgtt tccaacttca aagcctgtgc ggtggtcttt
     6541 tatcattttg tacggatgaa aaacatagct cctgatctgg ctgccccact cgatcttttt
     6601 cttattggca ttagcagcat tctttgcttc ctggcgcttg cgcagctctt cttcatacaa
     6661 acggctctta agcattttta aagccagctc ccgattttca ccctgcgtgc gcgattgctg
     6721 gcattcaaca ataattcctg aagtgatatg tttcagtcga accgctgttt caaccttgtt
     6781 tacgttttgt ccgcccttgc cgccactgcg gtaaaattcc cattcaagtt ccgcgggatt
     6841 cacctgtatg tcgatgctgt catcgatcag cggatataca aaaacggatg cgaaagatgt
     6901 atgacgtctt gcattgctgt cgaacggtga tatacgaacg agacgatgta caccgctttc
     6961 tgcttttaaa aatccaaacg caaacggacc atcgaactgt atggttgcgg tttttatgcc
     7021 cgccccctct ccttcctgga aatcaagttc tgttactttc catccctgct tttctccgta
     7081 catgcgatac atgcgcagca acatctccgc ccaatcctgg ctttctgttc cacccgcgcc
     7141 cgggttgatc tgcaacacag cgggcaactc atcctccggc tgattgaggg tgcttttaaa
     7201 ttcggcttcg tccaacgccc gcaatccctg gtcgtaggca agctttgttt cctgttccgt
     7261 tgcatcgccc gatttccaaa aatcgaacaa cactgcgaag tcttccacag cagtttcaac
     7321 ctgcgcgtat aacttcagcc aatattcgtt tgtcttgatt tctttcatga taccggtggc
     7381 acgttcatta tcgttccaga agcccggtga aagagagagt tgcctgtcgt tctctatttt
     7441 ttgtgtgcgg ttatcaacgt caaagaaacc tccttatccc tgcaaggcgg gaccgcatat
     7501 cgttcaattt ttcttgtgtc atgacgcgaa ggtaatttta gaatttcaga tttacgatgc
     7561 acgatttagg atttaggatt tgtaaattat gtatccccca acttcaaaca cctaaaccaa
     7621 taaacgaata actaataacc gaataaacta ataaccagct aacaaactaa tcaaacatca
     7681 cgttgtcgat caatcgaacg tcttcaataa aagcagcggc aagcgcaact agttttctgt
     7741 cgttttcaaa tacagttatt ggcttcaatg tttctgcatc gcagatctct acataatcta
     7801 ctttatcaaa accggctgaa agaatgtttt gcacagcttc ttgttttaat gttccaatcg
     7861 attggttgcg aaaattgttt ttaataaatt gaagtgcctc gtagatcgca ccggctttcg
     7921 atcgcgcagc gtcacttaaa cgcatattcc ggctgctcat ggctaatcca tttgattctc
     7981 gcaccgtact ggcgatcacc acttccatct gcggaaaaaa aacgtccatc atttttttaa
     8041 caacaagaca ttgctgataa tccttttgtc caagaaatat tttgtcaggt ctaacgatgt
     8101 cgagcaggca atgtacagcg ttgcaaactc cctggaaatg gccgggccga taataacctt
     8161 ccaaaatatt ttcgaggtta tcgaggtcat attgatggag gttcgttata ccacccgggt
     8221 aaatttcttt cacggaaggc aggaacaaaa catctgtttt atctctttcg agtagaagga
     8281 tgtcattctc aagcgttacc ggatattttt caaagtcttt gggatcattg aactggacag
     8341 gattaataaa gatgctgcac actgtaagat cgcataactt cttgcactgc tgaatcaaag
     8401 aaagatggcc ttcgtgtaaa gcacccatcg tgggcacaaa gccaatataa tattttttat
     8461 cgcggaattt ttgcaggcaa tgccggaccg gcccgatctt tttaaataac ctcatcgcag
     8521 ggatttaaca gcgctcaaac gacttacgta ttcggtttta aaagcatttc tttacctttg
     8581 ccaatcttaa aatttggaat acaaggtaaa aatcaagatt actgaatgtc aacaaagaaa
     8641 agaattttat ttatagccac agaaatgtcg ccttaccttg agctgactga gtttgctgaa
     8701 attgttaata aacttgcgat aaagtgtaat gataatggat gggaagttcg ttgcattatg
     8761 ccgcggttcg gagtgatcaa cgaaaggcgt caccgtttgc atgaagtcgt gagattatca
     8821 ggtattaatg tttccgttga caatgatgat tacccgctcc agataaaggt agcatcgctt
     8881 ccaaacgcaa ggctccaggt gtattttctc gataacgaag actttttcag aagaaaatat
     8941 gtattccaaa acgaaaacga aaactggtat gaagacaacg atctgcgcac cattttcttt
     9001 tctaagggcg cattggaaac agtgaaaaaa ttcgggtggc cacccgacat tattcattgc
     9061 agcggctgga tgacggggtt gatcccgatg tatcttaaaa cagcgtataa acgggagcct
     9121 gtttttgtgc acagtaaagt tgtatatacc atcggtcaaa atacgttcaa agagaagctc
     9181 ggaaaatctt ttcttgaaaa ggcttctata catgccggca taaaagagaa ggaccttgag
     9241 ccttacaaag aaaccactaa cgttgcgtta ttcagaggcg gtgcatatta tgctgacgcg
     9301 atcacatttg gtgcagagaa ggtcgataag aaacttgttg aagagtttgc aaaggcaaaa
     9361 ggaaaacgca tcctgccata caacaaagaa actgatttaa cagagtattt agaattgtat
     9421 aacgagcttg cgtcgaagta aaatttaaat gaatttaagt gtctcgcgag ctggtatttt
     9481 ttcgattttt ttatttctct tcacgatctt ttttgcttgc acaaaaattt caacaacaga
     9541 catcggctcc ggtttaattc cgcctgttga cgcggttaac acaacagaca ctgtacttga
     9601 tgttctcaca aaaaatgaag gctttgatac ggttgttgta gggatttcag acgaccacgc
     9661 gttaggatat attaacgatc ccctgttcgg cgccacaacc gcttcgataa actttcagct
     9721 cgccccacca tacacaccat tttcttgggg caccactccg gatagtcttt atcttgattc
     9781 tgttgtgctt tgtctgggtt accagggata ctggggcgac agtcttccac ctttggcgtt
     9841 taaagtttgg gatatggatg aaaatgccac attcacaaac gattcaatat acttaaacac
     9901 tcacactttt ccgaaacgcg agaacctgac agagaatggt caggctaaat ttgttgatat
     9961 cttaaagtta gatgatcctg atacgcttgc aaactatccg gagttggcaa cttaccaggt
    10021 gcgcattcgt ttgaactatg attttggcct gcgactcctg cattttgatt ccctgacact
    10081 ctcaaacgat acaaattttt acagggtcac aaaaggattt attgtagaac cggaacaaac
    10141 gggaaatgca ttgttattgg taaaccttct tgacagcaat acgcatcttt ctttatacta
    10201 taggatgagg acccctaccg gtttcgatac tgttaccgca agattttcac cgaatccgct
    10261 aacgtctgcg agttcaaata caattttgag gaattatagt ggaacaagca ttccgcaata
    10321 ttttccaccg aattcagacg cgcaggatag cctgcttttc attcaaacaa gtccgggtac
    10381 attcgccagg ataaaaattc cagggctcga cagccttcca aatgtcatcg tgcatcgtgc
    10441 ggaattgttg atggagcagg tgcctgatct tagcagcaat tatgacggtt attttaaagc
    10501 gcccaatctt tttctcgctg cctacagcaa agactcgatg tatcgatttg cggttcccaa
    10561 tgacgtcaca ttcacaagta gtggcatcaa cagacctgac ctgtttgggg ttttaccgag
    10621 accaaagaca tacgggggcc ggacgatatc cagctataat ttcgagctca cgagatatgt
    10681 gcaaggcatt gtaaccaggc aagacagttc gtacgatttc atagtatggg ctccctataa
    10741 ttattatata cgcccggttg agaaagcaac ctttttctta cccatcgcaa ctccgccatt
    10801 aaattctcct gccattggca gggtgcgact tggcggtggc aacaattccg agcacaagat
    10861 gcgcctgcac atagtttatt caccgcttaa ataactttcg cggagtgctg tatatttgca
    10921 gccttaaaaa atttctatgc cttacttgtt tacttctgaa agtgtatcgg aaggacatcc
    10981 tgataaagtc gcagaccaga tatccgatgc attgatcgat aatttcctgg catttgaccc
    11041 tgagagtaag gtagcttgcg aaacgcttgt cacaacaggc caggttatcc tggctggtga
    11101 agtccgttca aaggcatatc tcgatgtaca ggagatcgcg cgcagcgtga ttcgtaagat
    11161 cggctataca agaagtgaat acatgttcga ggcgcattcc tgcggtgtgc tctccgcgat
    11221 ccatgaacaa tctgcggaca tcaaccaggg agttgatcgc gcgcaaaaag aagaacaggg
    11281 cgcaggtgac caggggatga tgtttggcta cgccacgaat gaaacggaag aatatatgcc
    11341 gcttgcgctg agcctggctc ataaaatttt gatcgaactc gctttgattc gaagagaaaa
    11401 tgacgaagta aattatttgc gcccggatgc caaaagccag gtaacgcttg aatacgatga
    11461 caacaacaaa ccagtgcgca tcgatgccat cgttgtctca actcagcatg atgattttgg
    11521 gaccgaagat gaaatgcagg aacagatccg gaaagacgtt atcgaaattc tgattccaag
    11581 gatcaaagaa aaaaatcagc aatacgcgca cctgttcacc gacgatatta aataccacat
    11641 aaaccctacc ggaaagtttg ttattggtgg tcctcacggc gacacaggct tgacgggaag
    11701 aaagatcatt gtggacacgt atggtggaaa gggcgcacac ggcggtggtg cttttagtgg
    11761 aaaagacccc agcaaagttg accgctcagg cgcttatgca acacgccaca tcgcgaagaa
    11821 ccttgttgct gcaggtgtgt gtgatgaagc gctggtgcag gtgtcgtatg caatcggggt
    11881 agcaaagccc actagtatca acgtgcaaac gtttcgcacg tcaaaagtga atatggcgga
    11941 taatgaaata agcaaagttg ttgaaagcat gtttgatatg cgtccctact ttatcgaaca
    12001 acgattaaag ctcagaaacc cgatctacag tgaaactgcg gcttatggac acatgggaag
    12061 aaagaatgaa acggtcgaaa aaacttttgt ctcgccggaa ggaagaaaag taacaaagaa
    12121 cgtagaactc ttcacctggg aaaagctcga ctacgttgat aaattgaaag aagctttcgc
    12181 gttgaagtag cagtttattt tctgatcaca ttttccctga tgttgattgc cgtgtcttgg
    12241 ttgctgcctc catttctccc ggttagcaag aaaccagtta accatttacc caattaacgc
    12301 gttacgcacc tcactcctgc cctttcaaaa attcatacac gtccttccat tgtgttgttt
    12361 caagagccag cgcctttgcg cgtaattcct cttcagtgtt ctcaatttcc ttcaggccaa
    12421 gtcccggatg attgttcaac caaagggcct tacatccaag atttcttgca aactgcacat
    12481 ccgttatacg atctccaata acaaacgaac gctgaagatc atactcagga ttatcgacgt
    12541 aatgtttgac cataccaatg cgcggtttcc tgtttggtga cttttcttcc tttaaagatg
    12601 ggtcaatata aactcctgaa aaaaacacat cttcattttc aaaagcatgt atcacaaaat
    12661 tgtggatcgg ccaaaaatgt tctgatggga agtatgctgt accaaggcca tcctggtttg
    12721 tcaccatcgc gagttcataa ttgaattccg tcgcgatcaa attcatgtac ttaaaaacat
    12781 gcgggtagaa ctcgagcttg ctccagtcat cgatattacc caaaacaggt tcatggatca
    12841 aagtcccgtc gcggtcgata aaaagaatac gttttgctgt gctcataacc gcgcaatgtt
    12901 aggaaaaata atttttcccg ggcgttaaaa cgatcgttgc tactgattac gaaattattt
    12961 ttatctcatt gtacaactat tccctatttt taaaacctgt tgttttatct aacgatcgat
    13021 tatgaaaaca tcaagacgta cattcgtcaa acaggctgga attacacttg cgggcaccgc
    13081 attagttccg cgcaaaatat tagccacagg caatgcaacc gactatatcg tcggtatcca
    13141 attgtattcg gtgagagatg acctgaagaa agatcctgca ggcacgctca aaaaaattgc
    13201 tgcgctcggc tacacgcatg ttgagcatgc cggatacgag aaccgcaaat tctacggata
    13261 cccacccaat gaattcaagc gcctgttgag tgacctgggt ttaaaaatgc tcagcggtca
    13321 caatgggttg gacgcaacaa aatgggataa gtcgcaaaat gaat
//
LOCUS       DASQJI010000569         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1298188,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000569 DASQJI010000000
VERSION     DASQJI010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298188"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VEV83_15615"
     CDS             <1..532
                     /locus_tag="VEV83_15615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46604.1"
                     /translation="ETASGFQMNADSSFEFFYSYGALDRYGKGTWRMVNDSTISFNSE
                     KRPPLDFKLLKHEERKDDFVTIEITDPNKNLLRYVAGGIKTDSGAEDIQTNNNGIAQI
                     KRQRADSIALVFTICPDRYSIFPVTDKDDNYFLFQFEPWIATVFFENFTLTFKNNMLT
                     GKHPLLEGDDFTYEKE"
     gene            complement(558..>1603)
                     /locus_tag="VEV83_15620"
     CDS             complement(558..>1603)
                     /locus_tag="VEV83_15620"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK46605.1"
                     /translation="IDFKKAILVEKQAQFHPVKYVQALARAFENSGGVILQQCPVKDV
                     KEDELIELKTPKGSFHSRYLIYATHIPPGVNLLHLRCAPYRSYAIAVALKDKKYPREL
                     IYDMYDPYHYIRTQKIGDTTYLVVGGEDHKTGHVENTEECFRKLEAYTREHFAVDKLT
                     NKWSSQFFDPADGLPYIGHLPGHDGNILVATGFGGHGITYSHVAAVTLKSLVLAEENP
                     YIKLFDPNRIKPVAGFASFISHNADVARLFVGKWFAHEKLEELAGIAPGEGKVVKYEG
                     HTIALYKDETGELHVVSPVCPHLKCSVAWNNAELSWDCPCHGSRFDINGNVITGPAGA
                     SLEQLEIRSFIEH"
BASE COUNT          441 a          373 c          341 g          448 t
ORIGIN      
        1 ggaaacagcc agcggtttcc agatgaatgc ggattctagt tttgaattct tttattcgta
       61 tggcgcattg gacaggtatg gcaagggcac atggcgcatg gtgaatgact cgactatctc
      121 ctttaacagc gaaaaaagac cgccgcttga tttcaaactg cttaaacacg aagagagaaa
      181 agatgacttc gttacaattg aaataaccga cccaaacaaa aacttactgc gatatgttgc
      241 cggcggcatt aaaacggact caggcgcaga agatattcaa actaacaaca acggtattgc
      301 acagatcaaa cgccaacgcg cagattcgat cgctttagtg tttaccattt gtcccgacag
      361 gtattcgata ttccccgtta ccgataaaga cgataattac tttttgtttc aattcgaacc
      421 ctggatcgca acagtgtttt ttgaaaactt tactctcact ttcaaaaaca acatgctcac
      481 cgggaaacac ccgttgttgg agggagatga ttttacttat gaaaaagaat gatagctgta
      541 atagggccgg accctggtca gtgttcgatg aaggacctta tttcaagctg ttcgagcgat
      601 gctcctgcag ggccggtgat cacgtttcca ttgatatcga aacgtgatcc atgacaggga
      661 caatcccagc taagttctgc attattccag gcgactgaac attttaaatg tggacaaaca
      721 gggctgacga cgtgcagttc tcccgtctca tctttgtaca acgcgatagt atgtccttca
      781 tattttacaa cttttccctc gccgggcgcg ataccggcaa gctcttccag tttctcatga
      841 gcaaaccatt tcccaacaaa caatctagcg acgtcagcat tatggctgat gaaagaagca
      901 aagccggcaa ccggcttgat gcggtttgga tcaaacaact ttatgtacgg attttcttca
      961 gccaacacca ggctttttaa tgttacggcc gcaacatgac tgtaagtaat tccgtgacct
     1021 ccaaaccctg tagcgacaag aatatttcca tcatgaccgg gcaggtgtcc tatatatggt
     1081 aatccatcag ccggatcaaa aaattgtgaa gaccatttat tagtcagttt gtcaacagca
     1141 aaatgttcgc gcgtatacgc ttcgagttta cgaaaacact cttcggtatt ttccacgtgg
     1201 ccggttttat gatcttctcc gccaaccacc aggtatgttg tgtctccgat cttttgtgtg
     1261 cggatatagt gatacggatc gtacatatca tagatcaatt cccgcgggta tttcttgtct
     1321 tttaaagcga ccgcgattgc ataactccga tatggtgcac aacgtaaatg caataaatta
     1381 acgccgggtg gaatatgtgt tgcgtatatc aaatacctcg agtggaagct gcctttgggc
     1441 gttttcagct cgatcagctc gtcctccttt acatccttta ccgggcattg ttgtaagatc
     1501 acgccgcctg aattttcaaa tgccctcgcc aatgcctgaa cgtattttac cgggtgaaac
     1561 tgcgcctgtt tttcaacaag aattgccttt ttgaaatcga tat
//
LOCUS       DASQJI010000570         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1298482,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000570 DASQJI010000000
VERSION     DASQJI010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298482"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="VEV83_15625"
     CDS             <1..643
                     /locus_tag="VEV83_15625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HYK46606.1"
                     /translation="LCDVRMQETSAAIDWHLLFAIIIIATLLFGNITAVFQQSVKRML
                     AYSSIAQAGFMLFALFSLNNYAKQGLLMYSVAYSLATIGLFAVLVKMKDVTFEGYNGL
                     AKTQPVLAATNTVFLLSLAGIPLTAGFLAKYYMLASVIENGSYIWLVVLAVLFAAVSV
                     YYYFRVIQAMYFKNGEPKTEDITGSFKTGLIVLAGIIILVGVLPQLLFNWLYF"
     gene            801..2066
                     /locus_tag="VEV83_15630"
     CDS             801..2066
                     /locus_tag="VEV83_15630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46607.1"
                     /translation="MTLKDSFDLAFRTVRSNKLRTGITVAIIAFGIMALIGIITAIQA
                     MNEGLRNSFSTMGANGFTISYKERFRFDDGDRTEKVDKTKKAKKSNLDKYIQLYEAET
                     FKQKFDYPAAVSIALNGFGNYEIHYKDKKTNPNVRMYGGDENYLAVNGFSIETGRNLT
                     PLDVQTGRDVCMIGSDVASKLFGQFKDIAVDKFITIGSKPYRVIAVLKSKGSSALLRA
                     DNVVITSYNNVRRTGFGSNSFTIGVLANDISQLDGAVNEATATFRTVRKLLPSDEDNF
                     VIEKSDKLAETFIGLLGSIQAAAGAIGLITLIGAAIGLMNIMLVAVNERTREVGLIKA
                     LGGKRRNIRRQFLFESIIISLLGALFGIILGVLIGNVFAMLLNAGFAVPWAWVIGGII
                     ICSGVGLLAGLWPAIKASRLNPITALRYE"
BASE COUNT          552 a          432 c          491 g          595 t
ORIGIN      
        1 gttatgcgat gtgcggatgc aggaaacatc tgcagctatc gactggcact tgttgtttgc
       61 catcatcata atcgctactt tattgtttgg caacattacg gccgtatttc agcaaagcgt
      121 taagagaatg ctcgcatact cgagcattgc gcaggcaggc tttatgcttt ttgcgttgtt
      181 cagcctgaat aactatgcga aacaaggttt gctgatgtat tctgttgcct atagcttggc
      241 aaccatcggt ttgttcgcag ttcttgtaaa aatgaaagat gtaaccttcg aaggttacaa
      301 tggcctggct aaaacacagc cggttcttgc tgcaacaaat actgtatttc tactgtcatt
      361 agccggcatt ccactcactg caggcttcct tgcgaaatat tatatgctgg cttccgtgat
      421 agagaatggc agctatattt ggctggtggt gctggcagtg ttatttgctg cggtgagcgt
      481 atattattat ttcagagtta tacaggccat gtatttcaaa aatggtgaac caaaaacgga
      541 agacatcacc ggcagcttta agacgggcct tatagtgctt gcaggaataa ttattttggt
      601 cggcgttttg ccacaactgc tttttaactg gttgtatttt tagttgcagg ttacaggttg
      661 caggttcatt gtttcaaagt ttcaaattac cggctttacc tctcacataa aagtcatctt
      721 aaattaatca gactgtttac cttcacataa gattgacaat tcactattga caatttcaca
      781 atcaccattg atcattcgcg atgacgctca aagattcttt tgatctcgct tttagaacgg
      841 ttcgcagcaa taaacttcga acaggcatca cagttgctat catagctttt ggtatcatgg
      901 ctttgatcgg aattatcacc gccatccagg caatgaatga agggttgagg aatagctttt
      961 ctaccatggg tgcgaatgga tttaccatct cctataaaga acgttttcgt tttgacgatg
     1021 gcgaccggac cgagaaagtt gataagacaa agaaagcaaa aaagtccaac cttgataaat
     1081 atatccagtt gtatgaagcc gaaacgttta aacaaaaatt tgattatccg gcggcggtaa
     1141 gtatcgctct taatggtttt ggcaactatg agatacatta taaggacaaa aagacgaatc
     1201 caaatgtgcg catgtatggc ggggatgaaa attacttagc tgtaaacggc ttctcaattg
     1261 aaaccgggcg taacctcact ccgcttgatg tacaaaccgg ccgtgatgtt tgcatgatcg
     1321 gaagcgatgt tgcgtcgaaa ttatttggac agttcaaaga cattgccgtt gataaattca
     1381 tcacgatcgg ttcaaaaccg taccgtgtta tagcagtgct gaagtctaag gggtcgagtg
     1441 ctttattgcg cgcggacaac gtggtgatca cttcctataa caatgtgcgg agaacgggct
     1501 ttgggtccaa ttcgttcacc atcggtgtac tggcaaacga catatcgcag ttggacggag
     1561 cagtgaatga agccacggcg accttcagga cggtgcgaaa attgttgcca agcgatgaag
     1621 ataacttcgt gatcgaaaaa agtgacaaac tcgccgaaac gttcatcggt ttgcttggaa
     1681 gtatccaggc tgcggccgga gctattggtt tgataacact cattggtgct gcgatcgggc
     1741 tcatgaacat tatgctagtc gccgtgaacg aacgtacacg cgaagtaggt ttgatcaaag
     1801 cgctgggtgg caagcgccgc aacatccgcc gccaattttt attcgaatca ataattatca
     1861 gtttgctcgg tgcattgttt ggaataatcc tgggcgtgct catcggcaac gttttcgcaa
     1921 tgttgttgaa cgccggtttc gccgtgccct gggcgtgggt tattggcggt attatcatct
     1981 gcagcggcgt agggttactt gccggccttt ggcctgcaat aaaagcatcc cgcctcaatc
     2041 caattaccgc attacgatac gaatagactc
//
LOCUS       DASQJI010000571         3746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_839964,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000571 DASQJI010000000
VERSION     DASQJI010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839964"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="VEV83_15635"
     CDS             complement(<1..632)
                     /locus_tag="VEV83_15635"
                     /inference="COORDINATES: protein motif:HMM:NF017932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent peptidase"
                     /protein_id="HYK46608.1"
                     /translation="MKGLIIFLIILPILVFLIFRKRKSRQVNLPENFRDLLNEHVSFY
                     RQLDDAGKLRFEERIKDFLSYVRIHGVHTQVNDVDKLLVAASAVIPTFGFDWHYHNLR
                     DVLLYPDRFDRDFSLTSDERNVLGMVGTGPMQRMMILSRPALRQSFATENSPHHTGIH
                     EFVHLLDKADGETDGIPTQLLSRQYTIPWIKYMSEEIEKIKAGNSDINIYG"
     gene            complement(877..2223)
                     /locus_tag="VEV83_15640"
     CDS             complement(877..2223)
                     /locus_tag="VEV83_15640"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46609.1"
                     /translation="MKISSTISQCSFACNLFFIITFSTASAQTGSPDQSNKGLVLTYD
                     NFIVPPTADYVRQGANGGVTAPATGNNNTWNYSELTNNDAFSSTVSYAPSNNNFFSTA
                     RRKTDFIFPLNESILIYETGYEADDKNAYHRLGRSIQRQAFPLGALSGFLLDSLVINQ
                     QDVSDAGTLNFVAYPCKTSSSWSSSIRATTGFQLSFIAFGLDHTPGEFVQQQTLTRSV
                     VGSGKMRIPGADKKIDVLMVRSTFTNIDSVYLGGLPAPPEILAAFGLTQGQQTDVNQY
                     VFMRAGIDEPLISFYMNTDFSAVNFIQYDTRFVNIYCGKKNEFVCNGGTTLCLPFADV
                     TPVLLSNNTATVGACISSDKNENRVYAQNATAQQKNNSLALIYPNPSRGAFQLRLNTL
                     DNSSTSIRIFDVTGKTLTEFCTRDRQSNFGSELKPGVYFAEIRNNKTREVIRLVKL"
     gene            complement(2779..3408)
                     /locus_tag="VEV83_15645"
     CDS             complement(2779..3408)
                     /locus_tag="VEV83_15645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK46610.1"
                     /translation="MKKFFVPLAASVLLFFVFAKRPDPQWISLFDGKSLNGWKVGANA
                     STFSVDSGMIIVHGPTAHLFYDGAVQQHNFKNFEFKASVMTTPGSNSGIYFHTVYQDS
                     SWPKKGYEVQVNNSHTDWRRTGSLYGIDDVKEVYVKDNEWYTEYIKVEGKRVIVKIND
                     KTVVDYTEPEHVERKAGDEQRVISSGTFALQGHDPNSKVYFKDIFVKPE"
BASE COUNT         1040 a          817 c          819 g         1070 t
ORIGIN      
        1 ccataaatat taatgtctga gttgccggct tttatttttt cgatctcttc actcatgtat
       61 tttatccacg ggatcgtata ctgcctgctg agtaattgcg ttggtatgcc atctgtttcg
      121 ccatcggctt tatcaagcaa gtgtacaaac tcgtggatgc cggtgtggtg gggagaattt
      181 tcagtcgcaa aactttgtcg caacgccggg cgcgaaagga tcatcattct ttgcattggg
      241 ccggttccga ccatgcccag tacatttctt tcgtcggatg tgagcgaaaa gtcacggtca
      301 aaccgatccg gataaagaag cacatcacgg agattatgat aatgccagtc gaaaccgaat
      361 gtgggtatta ccgcgctggc ggcgacaagc agtttatcaa catcatttac ttgcgtatgc
      421 acgccatgaa tgcgcacgta tgaaagaaag tctttgatcc tctcctcgaa ccgaagttta
      481 cctgcatcat caagttggcg ataaaaagaa acgtgttcat tcagcagatc gcgaaaattt
      541 tccggaagat taacctgacg gctttttctt tttcgaaata ttaagaagac gagtatcggc
      601 agaatgatga ggaatatgat aaggcctttc atgtttacaa ataactgtaa tggatttttt
      661 tcaatcaata aatcgggtgg cgaatattat gttgcggttg tacacgtgtg ctgacgccgg
      721 catgacggtt tcattcgttc ggacggtgca ttattaaaaa cgcgcttgcc attccgagtg
      781 taaccgctac ttcataaaga cgagaaccgc cctaacgagg gatctgctac gcaagacgga
      841 tcatgaattc tgcttagacc gatttctagc gcaaccctac aactttacaa gcctgatcac
      901 ctcccgcgtt ttgttgttgc gtatctcagc aaaataaacg ccgggtttca attcactgcc
      961 aaaattactt tgcctgtcgc gcgtgcagaa ctccgtcagc gttttgccgg taacatcaaa
     1021 tatccggatt gaagtgctgc tgttatcaag agtatttaac cgcagttgaa acgctccgcg
     1081 ggatggattt gggtatatca acgcaaggga attatttttc tgttgtgcag tggcgttttg
     1141 cgcgtacact cgattttcat ttttatcgct gctgatgcat gctccgacag ttgcagtgtt
     1201 attgctcaac agcaccggcg ttacgtccgc aaagggcaga cacaaagttg ttccgccatt
     1261 gcagacgaac tcattctttt tcccgcagta tatgtttacg aatcgtgtat cgtactgaat
     1321 aaagtttact gcgctgaaat ccgtattcat gtaaaaactt atcaacggct catcgattcc
     1381 ggctcgcata aatacatact ggttcacgtc agtttgctgg ccctgcgtca aaccaaatgc
     1441 tgcaagaatt tccggcggcg caggaagtcc gccaagataa acactgtcaa tgtttgtaaa
     1501 tgttgaacgg accatcagca cgtcaatctt tttatcagcg cccgggatgc gcattttgcc
     1561 cgaaccgaca actgatcgtg tgagcgtttg ttgttgaacg aattctcctg gcgtatggtc
     1621 aaggccaaac gctatgaatg ataattgaaa accggttgtt gcacggatag aagaagacca
     1681 tgaagaagat gttttgcagg ggtacgcaac aaaattcaat gttcctgcat cagaaacgtc
     1741 ttgttggtta atgaccaaag aatcgagcag aaacccgctg agcgcgccga ggggaaaagc
     1801 ctgccgttga atgctccttc ccagccgatg atatgcgttt ttgtcatcag cttcatagcc
     1861 cgtttcatag atcaggatac tttcattaag gggaaatatg aaatctgttt ttcgccgtgc
     1921 ggtcgaaaag aaattattgt ttgatggcgc gtaacttaca gtcgaagaaa acgcatcgtt
     1981 gtttgtaagt tcactgtaat tccaggtgtt gttattgccc gttgccggcg ctgtcactcc
     2041 tccgttcgcg ccttgcctca cataatcagc cgtgggaggc actataaaat tatcgtatgt
     2101 aaggaccagt cctttatttg actgatctgg cgaacccgtt tgcgcggacg ctgtagagaa
     2161 tgtgatgatg aaaaataaat tgcaggcgaa gctacactga ctgatggtag aactgatttt
     2221 catagcgaat taattgaggg aggctaaaag tacaccgaat caatcaaacg gcaataagga
     2281 gcgtgaatgg tgaatggtga attgtcaatt gtgaatggct attggaattt taagctcaaa
     2341 gattaaatgg aagtggctaa accgattcga taggtacgac acctaaatta tactagagta
     2401 aactcaaatc gtaattcgca aatcccaaat cctaaatcct gattcctaaa tccaaatccg
     2461 caatcggatg gtgaatggtg aattgtcaat tgtgaatgag cggttggaat tttaagctga
     2521 aagattaaat ggacttgctg atcctattcg ataatttgga caccgaaatt gtaccatgta
     2581 aactcaaatc gtaattcggc aaatcccaaa tcctaaatcc tgattcctaa atcctaaatc
     2641 cggaacttgg taatctattc aataatcacg acacctaatt cgtgctacgt aaactcaatc
     2701 gtaaatggta aatcctaaat cctaaatctg caatcctaaa tctgcaatct gcaatcgcca
     2761 atctgcaatc atcccaactc attccggttt cacaaaaata tctttgaaat acaccttgct
     2821 gtttggatcg tgcccctgta acgcaaatgt gccactagag atcacccttt gttcatcgcc
     2881 ggctttgcgt tctacatgtt caggctcagt ataatcaaca actgtcttgt catttatttt
     2941 tacgatcact cttttgcctt ccactttaat gtattcagtg taccattcat tgtcctttac
     3001 ataaacctcc tttacatcat cgatgccata gaggctgcct gttctccgcc agtcggtgtg
     3061 tgaattattc acctgcactt cgtagccttt ctttggccag ctactgtcct ggtacacggt
     3121 atgaaaatag atgcctgagt tggaaccggg cgttgtcatc acgcttgctt tgaattcaaa
     3181 atttttgaag ttgtgttgtt gcacggcacc gtcgtaaaat aaatgcgctg ttggtccatg
     3241 cacgatgatc atcccgctgt cgacagaaaa tgtggaagca tttgctccga ctttccagcc
     3301 gttgagactt tttccgtcga ataaagagat ccattgcgga tcgggacgtt ttgcaaagac
     3361 aaaaaataat aagacggatg cagcgagtgg gacgaagaat tttttcatat gagttgttga
     3421 aacgtgaagc taagaatttt tcggggcaag gtttcaggca ggaaaattag acctgaggta
     3481 aaagggcaaa gacgtgcaag cgtcataacg tatatgaggc agtttctgag aacatatctg
     3541 cattcaattt ttaatgagcc aacaaagtat ttcagacaac gatcaggggt tgccacgcac
     3601 gtttcctcac cgcgccaaca ttttttacat gcgatatttg tcactggcat gatattccat
     3661 tacattcttc ctaaacaatc acaaatggat caaactacaa ctattttgga aggataccct
     3721 gacaacgaaa aaggggctta ccttgg
//
LOCUS       DASQJI010000572         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_71071,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000572 DASQJI010000000
VERSION     DASQJI010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71071"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VEV83_15650"
     CDS             complement(<1..408)
                     /locus_tag="VEV83_15650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HYK46611.1"
                     /translation="MPQFILSFDQGTTSSRTIIFNENGNIISTAQKEFKQVFPKPGWV
                     EHDPSEIWSTQLGTAAEAITKASLTVQDIAAIGITNQRETTVVWNRKTGAPLYNAIVW
                     QDRRTASYCDELKQEGHASMIQQKTGLIIDAYFS"
     gene            complement(564..857)
                     /locus_tag="VEV83_15655"
     CDS             complement(564..857)
                     /locus_tag="VEV83_15655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46612.1"
                     /translation="MKNKTIFAITVKLLLVASLLHAQSPRDSATQKLIQFYPASNSTL
                     RLVKYPVIAPNLYAKQLPFFCNKELQIQKTTGIALKFRLSTVEYCDKLEGKNR"
     gene            937..>2079
                     /locus_tag="VEV83_15660"
     CDS             937..>2079
                     /locus_tag="VEV83_15660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HYK46613.1"
                     /translation="MALSQTLQQKLLQRLSPQQIQLMKLLQIPTANLDERIKEELEEN
                     PALEVAEEDHEDGFEEQREEFEAEEEYDGSESEYDNIDISEYVSDSDDEIADYKLRDD
                     NYGDTEEQKTVPLRVETTLHDVLLDQLGMLSLDERRFKIAEQIVGSIDDDGYLRRELT
                     SIADDLAFRQNVDASEEEIEDIIKLIQQFDPSGVCARDLKECLMLQLSRQQADGREVA
                     LAVKVVDKYFDEFTKKHYEKIQRGLNISDDELKDVINLILKLNPRPGGNVGEVNKAES
                     YIIPDFFIINNAGKLELTLNSKNAPDLRISEGYREMLKEYDRGTKKDKRQKEAVLFIK
                     QKIDSAKWFIDMIKQRQNTLLSTMGAIMHYQKDFFLTGDETTLKPMI"
BASE COUNT          629 a          447 c          469 g          534 t
ORIGIN      
        1 tgaaaaatag gcatcgatta tcaatcccgt tttttgctgg atcattgaag catggccttc
       61 ctgtttcagc tcgtcgcaat aagaagcagt tcgccggtcc tgccatacaa ttgcattata
      121 caagggcgca ccggtttttc ggttccacac gaccgttgtc tcgcgttgat tggtgatgcc
      181 gatggcagcg atgtcctgca ctgttaacga cgcttttgta attgcttccg ctgctgtacc
      241 taattgcgtg ctccatattt ctgacggatc gtgctctacc cagcccggct tcggaaaaac
      301 ttgcttaaac tctttttgcg cagtggaaat tatgtttccg ttttcattaa aaattatcgt
      361 gcgcgaactg gttgtaccct ggtcaaacga caaaataaac tgaggcatga agcaattgtt
      421 tctcgttcaa aataagaatt aaatttccac attgcggcgc tctgccataa gcgatcataa
      481 atcatacatc gtacatcaga gatcggagat catagatcag agatcataga tcagagatca
      541 tacatcagac atcagacatc atctcacctg ttcttccctt ccagtttgtc gcaatactca
      601 acagtgctca accgaaattt cagggcaata cccgttgtct tttgtatctg taattccttg
      661 ttgcaaaaaa agggcagctg ttttgcatac aaatttggag cgattacagg atattttaca
      721 agccgaaggg tactgtttga tgccggatag aattgtataa gtttttgggt tgcagagtcg
      781 cgtggagatt gcgcatgcag caaagacgca acgagaagca atttaacagt tattgcaaaa
      841 attgttttgt ttttcaaacg catatttgcg ggtaaattta cagtaatgta attattttgc
      901 agttataatg ccgattaaaa ccttgatctc ataagcatgg ccttaagtca aacactacaa
      961 caaaaattat tacagcgcct atcaccacag cagattcagt taatgaagct gctccagata
     1021 cctacggcta atcttgacga acggatcaaa gaagaactcg aggaaaaccc ggcgctggag
     1081 gtggcagaag aagatcatga agatgggttt gaagaacaac gcgaggaatt tgaagctgaa
     1141 gaggaatatg acggcagcga gtctgagtat gacaacatcg atatttctga atatgtgagc
     1201 gacagcgacg atgagatcgc ggattataaa cttcgcgacg ataattacgg agacactgaa
     1261 gagcaaaaga ctgttccgct ccgcgttgaa accacactgc acgatgtgct gctcgaccag
     1321 ttgggcatgt tatcgctcga tgaacggaga ttcaagatcg cggagcaaat tgtaggcagt
     1381 attgacgatg acggatacct gcgccgcgaa cttacatcca ttgccgatga cctggcattc
     1441 cgccaaaacg tggatgcgtc tgaagaagaa attgaagata tcatcaaatt gatccagcag
     1501 ttcgatcctt ccggagtttg cgcgagggac ctgaaagaat gtctgatgct gcaattgtcg
     1561 cgtcagcagg ccgacggaag agaagttgcg ctggcagtga aggtggtcga taaatatttt
     1621 gacgaattca ccaagaagca ctacgaaaaa attcagcgcg gtctcaacat cagtgatgat
     1681 gaattaaaag acgttatcaa cctcatttta aaactcaacc ctcgccccgg cggaaatgtt
     1741 ggagaagtaa acaaagcgga aagctatatc atccctgact tcttcatcat taacaatgcc
     1801 ggcaaattag aacttacact caattcgaag aatgcgcccg acctccgcat cagtgaaggc
     1861 tatcgcgaaa tgctgaaaga atacgatcgc ggtactaaaa aagataagcg ccaaaaagaa
     1921 gccgtgttgt tcattaagca aaagatcgat tctgcgaaat ggttcatcga catgatcaag
     1981 caaaggcaaa acactctgct tagtacaatg ggcgcgatca tgcattatca aaaagatttt
     2041 tttctcaccg gtgatgagac gactctcaag ccgatgatc
//
LOCUS       DASQJI010000573         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2375645,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000573 DASQJI010000000
VERSION     DASQJI010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375645"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..763)
                     /locus_tag="VEV83_15665"
     CDS             complement(56..763)
                     /locus_tag="VEV83_15665"
                     /inference="COORDINATES: protein motif:HMM:TIGR02145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrobacter succinogenes major paralogous
                     domain-containing protein"
                     /protein_id="HYK46614.1"
                     /translation="MKKIITVVAVIVMVAACKKDSVPTAVTGHSSTDVKTDINDPGVD
                     GYIQIGTQKWMTKNLDVNHYRNGDHIPQVRRKADWSALKTGAWCWYNNDSATGAVYGK
                     LYNWYAVNDPRGLAPTGWHVPSDAEWVTLATNLGDNPGGKLKDTGTIEAGTGLWYAPN
                     TGATNETGFTGLPGGWRSAGGAFIRIGDYGFWWSSTQDQNIAHYAFYTVLFFDLGGLG
                     RGTDRKRNGYSVRCLRD"
     gene            complement(1425..>1868)
                     /locus_tag="VEV83_15670"
     CDS             complement(1425..>1868)
                     /locus_tag="VEV83_15670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46615.1"
                     /translation="KEILSGGAQSLLRQYLNNGGRIVVLGNNPIIYKIDSTGNMAGFD
                     FTTSDTILNIHYGPNDLRSISGLQPGFPTEEGKKWGLRHGWTSFLPLQKNQVDIVLGK
                     DENAKVSAWMKKYNDIRGSGFIQIWMDQDFVDDMSSIVRVAEHGM"
BASE COUNT          516 a          436 c          381 g          535 t
ORIGIN      
        1 aaattttcga tggggctacg cactttaccc ctaaataatc aaaatagaca aatcgtcaat
       61 ccctaaggca acgaacagaa tagccattac gcttacggtc ggtgcccctg cctaagccgc
      121 caaggtcgaa gaacaggacg gtgtaaaaag cgtagtgagc aatgttctgg tcctgcgtag
      181 aactccacca gaaaccgtag tcgccaatgc ggatgaatgc tccgccggcg ctacgccagc
      241 cgcccggaag ccctgtgaag ccggtttcat tagtggcacc tgtgttggga gcataccata
      301 agccggtgcc agcttcaatg gttccggtat ctttcaattt gccacccggg ttgtctccta
      361 aattcgttgc aagggtgacc cattcagcat cactgggtac atgccagcct gtgggggcca
      421 atcctcttgg atcatttaca gcataccaat tgtataactt accataaaca gcaccggtag
      481 cagaatcgtt attataccag caccatgcac cagtttttaa tgcactccag tcagctttgc
      541 gccttacctg tggtatgtgg tcaccgtttc tataatggtt gacatccaaa ttttttgtca
      601 tccatttttg agtgccaatc tgtatgtaac catcaacccc aggatcatta atgtcagttt
      661 taacgtccgt tgaactatga ccagttacag cggtaggcac tgaatctttt ttgcaggctg
      721 cgaccattac aatcacagca actacagtga ttatcttttt cattgttcga ttggtttatt
      781 aatatcaaaa atcatttttg tgcgattgag ttttatcatt tgggctaaag accttattga
      841 gtacaatttt tcattgctcc gcctcaggga gaagtaataa atcgaatact cgataccgtt
      901 gggcttaacg caggttattt acatatatag tttgcacgaa ggaaacggaa ttaagaaagc
      961 agaattgaat tggtgaaccg cctataaatc tacaataaaa aaatggagaa tgcaagcctg
     1021 ttttgctcgt cgattgtgtt ttgcatttcc ttctactgaa tcgcatgttt cggtttgccg
     1081 ggcctgtcag cgcacaatgt attacaacgc ataaaagaaa ttggagttcg aaaaatatgc
     1141 tggaacttca aacgattaaa gcggcatccg caaaccagtt gaaaatttag gaacagaggg
     1201 aggttttgct cacagatttc acagacatgc accgatctat cgcatcagat cttggtgatc
     1261 ggtgttcatc tgtgacagaa agcatcgcga tgcatactca acgacgcaga agtgattttc
     1321 gtttacacga ttggaatttc aataaagtgg ttgaaatagt tgatcattta aagctttaat
     1381 cgatctcaaa agcctccccc ttcaggggag gtttggacgg gcattcacat tccatgctca
     1441 gccactctca caattgaact catgtcatct acaaagtcct ggtccatcca aatttgtatg
     1501 aaccccgaac ccctgatgtc attatatttt ttcatccacg ctgaaacttt tgcgttctcg
     1561 tctttaccca atacaatgtc cacctggttt ttctgcagcg gaagaaatga cgtccagcca
     1621 tgacgtaatc cccatttctt tccttcttcg gttggaaaac ccggctgcaa cccgctgata
     1681 gagcgaagat cgttcggacc gtaatgaata ttcagtatag tgtcagaagt tgtaaaatca
     1741 aatcccgcca tatttcctgt cgaatctatt ttataaatga tcggattatt tccaagcacg
     1801 acgatccttc cgccattatt caaatattgc cgcaacagcg attgtgcacc gcctgaaaga
     1861 atttcctt
//
LOCUS       DASQJI010000574         5724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2375715,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000574 DASQJI010000000
VERSION     DASQJI010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375715"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..918
                     /locus_tag="VEV83_15675"
     CDS             124..918
                     /locus_tag="VEV83_15675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46616.1"
                     /translation="MKKNVLNLAAFLCLLISCSKSVNNRVENTGSSSVQFISVNGSND
                     STTYNYSFDEQGYLVKQQVLANTPVLYPVWEYTRDEQKRIIKITRFGSGDTLILNVNY
                     ANGNEVSYAVEYSSKDPSKITDSMTYEYADGKVQRLDVYLSPTASSEQATYYFTYEYA
                     ASNLSKVHSFWLNDGTYSESLGFDFEYDDKVNPLFSPDDIFMGMGIGGGASYISANNV
                     TRQTNHYGVYDDYVTYDFTYDSDNRPVSVTWSGPGIATMYGYYFYQ"
     gene            complement(938..1411)
                     /gene="coaD"
                     /locus_tag="VEV83_15680"
     CDS             complement(938..1411)
                     /gene="coaD"
                     /locus_tag="VEV83_15680"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HYK46617.1"
                     /translation="MQHVCLFPGTFDPVTLGHIDIICRAKPLFDKIIIGVGKNSTKSP
                     MFTAEQRLKWFEEIFKDENGIEAAIYEGLTIDFCKHVGANFILRGIRFVSDFEYEKTI
                     ADANRTLDPSIETIFLTGEPKYTSIASTIVRDIIRNGGDASPFLPEVVIRSLTKK"
     gene            complement(1432..2364)
                     /locus_tag="VEV83_15685"
     CDS             complement(1432..2364)
                     /locus_tag="VEV83_15685"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HYK46618.1"
                     /translation="MTLSSKHLLGIKDLTKEDIQLILSTAEQFKEVLQRPVKKVPSLR
                     DVTIVNLFFENSTRTRFSFELAEKRLSADVLNFSASTASTAKGETLLDTVNNILSMKV
                     DMVVMRHSASGAPHFLSQHIPAAIVNAGDGINEHPTQALLDAYSMQEKTGRLEGLRVA
                     IIGDIMHSRVALSNIHLLTKMGAEVMVAGPPTLIPKYIREAFNIHVTYHIKEALEWCD
                     VANVLRIQLERQNQPLFSSLREYNLAYGIKRSLLDDLKKEIVIMHPGPINRGVELDSD
                     VADGPYSIILNQVENGVAVRMAVLYLLSPTAPSS"
     gene            complement(2418..2939)
                     /gene="pyrR"
                     /locus_tag="VEV83_15690"
     CDS             complement(2418..2939)
                     /gene="pyrR"
                     /locus_tag="VEV83_15690"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HYK46619.1"
                     /translation="MKSILTEKQIQVTVKRLAHQVLENHLGLENTVLIGIQPRGIFLS
                     DRIVNELRSLLPHEKIRYGKLDITFYRDDIRRELKIANATNIPFSTENKDIILIDDVL
                     WTGRTIRSALDALLDFGRPARVELCVLIDRRFSREFPIQADYIGRSIDTFPSQKVFVR
                     WRENQGTDEVVLA"
     gene            complement(3054..4076)
                     /locus_tag="VEV83_15695"
     CDS             complement(3054..4076)
                     /locus_tag="VEV83_15695"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK46620.1"
                     /translation="MDKRSSTGKDKVKTMKWGIIGPGNIAKEFAEDLQYVRTKKCEIG
                     PVLGKDFENTREFVDTFHGALAAKTIYEFIRAAPDAAYIATPHPLHFTQTMACLENKI
                     PVLCEKPLALNLRQVTALTDASRRNNTFLMEGMWTRFLPSFQFLLNVIKSGTIGEVLH
                     VHADLSFIAEKDKNNRFFNPELGGGSLLDIGIYPIYLSYFLLGNPSEIFAAGKLTEAH
                     IDETCGVMLRYNNGNFALLESSIVTQTENSAWIYGSEGTIRIKSPWTERPRNIEVRIN
                     SESSFRHIPSWRGRGFQYEVEEVIDCLEEGKIESTILPHSSSTHIAKIMDSVRSQLNI
                     VYPDYE"
     gene            complement(4040..5524)
                     /locus_tag="VEV83_15700"
     CDS             complement(4040..5524)
                     /locus_tag="VEV83_15700"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006968.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HYK46621.1"
                     /translation="MPFTIFQFFHWYYPIEKKLWKDVATQAEHLAWCGISHVWLPPAC
                     KSSAGINGVGYDVYDLFDLGEFNQKGSKRTKYGTKTEYISAIKNLHAARLSVIADIVL
                     NHKNGADESEKAPVVQVDFHDRNKVVSEQFEKDVPTKYYFPARQKKYSEFVWDWKTFT
                     GIDENANGSGTAIFKLLNGYGDLWDDVVGDEFGNFDYLLGADIEFRNPHVRDELKYWG
                     KWYVETTGVDGFRLDAVKHISPQFYKEWLDFLNENFRTKFFTVAEYWSSNLDHLHAYL
                     DAMEDRVQLFDVPLHQNFYHASKEGKNFSLPDIFDGTLVRSRPECAVTFVDNHDTQPT
                     QALESFVEYWFKPHANALILLRHEGIPCVFYTDYYGGSYTVNETTIELAPVPHLYAML
                     QVRQHLLSGEQSDYFDHPNVIAWCIKGTEDNMQTGFVVVLSNSEDGFKEVNTGRHNAG
                     QRFVDITGGFNEPVITNEDGTAIFSVKARSISIWIKEVALEKIK"
BASE COUNT         1563 a         1276 c         1237 g         1648 t
ORIGIN      
        1 ctacgccaac attgcggaga taattggaaa aatgaaagaa acacagaatt tataattctt
       61 cgtcgtaatt ttattagcca gtttttgatg tgtctattct ttaaacctta ataaagtcgc
      121 aatatgaaaa agaacgttct taaccttgcg gcttttttat gcttattaat ttcctgcagc
      181 aaatcagtaa acaatagggt tgaaaacact ggtagctcat cggtacaatt tatttcagta
      241 aatggcagta atgatagcac aacatacaat tactcgtttg atgagcaagg ttatttagta
      301 aagcaacaag tccttgcgaa tactcccgtg ctttacccgg tgtgggaata tacccgcgat
      361 gaacagaaaa gaatcatcaa aataacaagg ttcggttccg gtgatacatt aatattgaat
      421 gtgaattatg cgaacggaaa tgaggtttct tacgctgtcg agtattccag taaggatccg
      481 tcaaaaataa cggatagcat gacttatgaa tatgcggacg gtaaagtaca aagacttgat
      541 gtttatttat caccaacagc aagctccgaa caagcgacat actatttcac atacgaatac
      601 gcagcttcaa acctttctaa agtacatagt ttctggttaa atgatggaac ttacagtgag
      661 agtctcggct ttgattttga atacgatgat aaagtcaatc ctttattttc gccggatgat
      721 atctttatgg gaatggggat aggcggtggc gcttcttata tatctgcaaa caatgttacg
      781 cggcaaacaa accactatgg tgtgtacgat gattatgtga cttacgactt cacttacgat
      841 tcagataaca ggcctgtttc tgtgacatgg tcggggccgg gtatcgccac gatgtacgga
      901 tattattttt atcaataagt ttctcctgtc agagtggtca cttcttcgtt agcgaccgta
      961 tcacaacttc aggcaaaaag ggcgaagcat cgccgccatt gcgaatgatg tcgcgtacga
     1021 tcgtcgaagc tatcgacgtg tatttgggtt cgccggttag aaagatggtt tcaatgcttg
     1081 gatcgagcgt gcgatttgca tctgcaattg ttttctcata ttcgaaatcg ctgacaaacc
     1141 gaatgcctcg taagatgaaa tttgcgccga cgtgtttgca aaaatcaatc gttagtcctt
     1201 cataaattgc cgcctcgatc ccattttcgt ccttaaagat ttcttcgaac cattttaatc
     1261 tttgctcagc ggtgaacatt ggcgatttcg ttgaattctt gcccacgcca ataatgatct
     1321 tgtcgaacag cggctttgcc cggcaaatga tatcaatgtg ccccagtgtt acgggatcaa
     1381 atgtgccggg gaataaacaa acatgttgca tgtgagatca ttttggaccg attaagacga
     1441 aggagccgtt ggacttagta aatacaatac cgccatgcgc accgccacgc cgttttccac
     1501 ctggttcagt atgattgaat aagggccgtc ggccacgtcg ctgtcgagtt caacaccacg
     1561 gttgattggg ccgggatgca tgatcacaat ttcctttttc agatcatcca gtaagcttct
     1621 ttttatacca taggccaggt tgtattcgcg caacgatgag aacaaaggct ggttctgtct
     1681 ttcaagctga atacgcagta cattggcgac gtcgcaccat tcgagcgctt cttttatgtg
     1741 ataagttaca tggatattga atgcctccct aatatacttg gggatcaaag taggcggacc
     1801 ggcaaccatt acttcagcgc ccatttttgt gaggaggtgg atattgctca gcgcaacacg
     1861 gctgtgcata atgtcgccaa tgatcgccac tctcagacct tcaagcctgc ccgttttttc
     1921 ctgcatagaa tacgcatcaa gcaaggcctg ggttggatgc tcattgatac cgtcacctgc
     1981 atttacaatg gctgccggaa tatgctgcga taaaaaatgc ggcgccccag atgcactgtg
     2041 tctcatcacg accatatcca ctttcatgct gaggatgttg tttaccgtat ccaataaagt
     2101 ttcacctttt gcggttgagg cagtgcttgc ggaaaaatta agtacatccg cagaaagtct
     2161 tttttctgcc agttcaaatg aaaagcgtgt acgcgtcgag ttttcaaaaa agagattgac
     2221 gatcgttaca tcccgtagcg atggcacttt tttgacgggt cgttgcaata cctctttgaa
     2281 ttgttctgcg gtggaaagaa ttaactgaat atcttctttg gtaagatctt ttatgccaag
     2341 cagatgtttg gacgacagtg tcattaaaaa gcgaagatag aaattagttt gtagtttgaa
     2401 gttgcgagtt tacgatctca ggcaagcaca acttcatccg tgccctggtt ttctctccag
     2461 cgcacaaaaa ctttctgtga agggaacgta tctatagacc ggccaatata atcagcctgg
     2521 atcggaaatt cgcggctaaa ccggcgatcg atcaatacac ataattcaac cctggcagga
     2581 cggccaaaat caagaagagc gtctagtgca gagcgaatag tgcggccggt ccagagcaca
     2641 tcgtcgatga gaatgatgtc tttgttttct gtgctgaatg gaatattggt agcgtttgca
     2701 atttttaatt cgcgccggat gtcatctctg taaaaagtaa tgtccagttt tccgtaccgg
     2761 atcttttcgt gcggaagcaa ggacctaagt tcattcacga tccggtcgct caaaaaaatt
     2821 ccccgcggtt gtatgccgat gagaaccgta ttttcaaggc caagatgatt ttccagcacc
     2881 tggtgagcca atctttttac agttacctgg atctgttttt ccgtgagtat agatttcaaa
     2941 cttatatttt gacactaaag taagcgatac agtttacaat ctgaaacgct gcttaggaag
     3001 ggtatgatcg tgtttactag tgaaaaaact ttttcagcgc ctgctgattc aacctattca
     3061 taatcggggt aaacaatgtt aagctgagat cggacggagt ccatgatctt tgcgatgtgc
     3121 gtgctcgaac tgtgtggtaa aatagtgctc tcaatcttac cttcttcaag gcagtcgatc
     3181 acttcctcca cttcatattg aaagcctctg cctctccagg aaggaatatg cctgaatgaa
     3241 gattcactgt ttattcttac ctcaatgttt cttggccgct cggtccaggg actttttatc
     3301 cgaatggttc cttcgctacc atagatccac gcgctgtttt cagtttgcgt aacaatcgac
     3361 gattcgagca atgcaaaatt tccgttgttg tacctcagca tgacaccgca ggtttcatcg
     3421 atatgcgcct ccgtgagttt acccgccgca aaaatttcgg acggattgcc caacaaaaaa
     3481 tagcttaggt aaatgggata aattccgata tcgagcagtg agccgcctcc aagttcgggg
     3541 ttgaaaaagc gattgttttt atctttttcg gcgatgaagc tgagatcagc gtgcacatga
     3601 agtacttcgc caatcgtccc tgatttgatc acatttaaaa gaaactgaaa actcggcaaa
     3661 aagcgcgtcc acattccttc catcaggaaa gtgttatttc gtcttgatgc atccgtgagc
     3721 gcagtaacct gcctcagatt taatgctaaa ggtttttcgc acaataccgg gatcttgttt
     3781 tcgagacaag ccatggtttg tgtgaaatgt aacggatgtg gcgttgcgat gtaagctgca
     3841 tccggcgcag ccctgataaa ttcatagatc gtttttgcgg caagggcgcc atgaaaggtg
     3901 tctacaaact ctcgggtgtt ttcaaaatct tttcccagca ccggccctat ctcacatttc
     3961 tttgtacgga catattgcag atcttcggca aattcttttg caatatttcc cgggccgatg
     4021 attccccact tcatcgtttt tactttatct tttccagtgc tacttctttt atccatatag
     4081 atatactgcg tgccttaact gaaaaaatcg ctgttccatc ttcgtttgta ataaccggtt
     4141 cattgaaacc gccggtgata tcaacaaaac gttggccggc attatgcctg cccgtattta
     4201 cttctttgaa gccatcttca ctgttggaaa gcacaacaac aaaaccagtt tgcatattgt
     4261 cttcagttcc tttgatacac caggcgatca cgttaggatg atcaaaataa tctgattgct
     4321 caccggacag gagatgttgc cgcacctgga gcattgcata taaatgcgga acgggtgcca
     4381 gttctatcgt tgtttcattc accgtgtaag agccaccgta ataatcggta tagaaaacac
     4441 aaggaattcc ttcatgccgt aacaggatga gcgcattcgc gtggggcttg aaccaatatt
     4501 cgacaaaaga ttccaacgcc tgtgttggct gcgtgtcgtg attgtcgaca aacgtaacag
     4561 cacactccgg ccggctgcgg acgagtgtgc cgtcaaaaat atcgggcaag ctgaagtttt
     4621 tgccttcttt tgaagcgtgg taaaaatttt gatgcagggg cacatcgaag agttgaacgc
     4681 ggtcctccat tgcatcgagg tacgcatgaa gatgatcaag gttcgagctc cagtattccg
     4741 cgaccgtaaa aaatttcgtc ctgaagtttt catttaagaa gtcaagccac tctttataga
     4801 attgcggtga aatatgtttc accgcgtcca gccggaaacc gtcgactccg gttgtttcaa
     4861 cataccattt gccccaatac ttcaattcat cgcgaacgtg tggattccgg aattcaatgt
     4921 cagctcccag caaataatca aagttgccaa attcatctcc caccacatca tcccacaagt
     4981 cgccatatcc attcagtaat ttaaaaatag ccgtcccgga accgttcgca ttttcatcga
     5041 tgccggtgaa tgttttccag tcccatacga attccgagta ttttttttgc cgcgcgggaa
     5101 aataatattt tgtgggaacg tctttttcaa actgctcaga aacaaccttg tttcgatcgt
     5161 gaaaatcgac ctgaactaca ggcgcttttt cactttcatc cgctccgttc ttgtgattca
     5221 aaacaatatc ggcgatcacc gataacctgg cagcatgtaa attttttatc gcggaaatat
     5281 attcagtttt ggtcccatac tttgttcgct tcgatccctt ctggttgaat tcgcccaaat
     5341 caaaaaggtc atacacgtcg taaccaacgc cattgatacc ggctgacgac ttacaggcag
     5401 gcggcagcca cacatgcgaa atgccacacc aggcgaggtg ctccgcttgt gttgcaacgt
     5461 ctttccataa ctttttttcg atcggatagt accaatgaaa aaactggaaa attgtaaatg
     5521 gcatacggac agattagcaa atcaaaattc aaaagttaaa tgaaaggcaa tatacggcaa
     5581 cgaaaatcgt accagcgccc gggggcatat tttttgtggt ataaatggaa caaaaaacga
     5641 ttgccgcatg ctatttgtca ccattccgga taatgacctg gccaaatact cttacatgag
     5701 tgccaaactg agggaactgc ttct
//
LOCUS       DASQJI010000575         3043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1455558,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000575 DASQJI010000000
VERSION     DASQJI010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3043
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455558"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="VEV83_15705"
     CDS             complement(<1..729)
                     /locus_tag="VEV83_15705"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HYK46622.1"
                     /translation="MRIHMYDRSTRFIAALCLIIACNPKQNDRDKNALFQLLPASETG
                     INFINNVTDTKELNILTYHNFYNGGGVAIGDVNNDGRPDVFFTSNQHPNKLFINKGDW
                     KFEDASVKSGIISAHKWHTGVTMVDINHDGWLDLYICNSANIPGDDRANELWVNEHDG
                     KFKEEAHRYGLDDKGPSTQATFFDYDHDGDLDCFVLNNDAHFNSNFGYNSYLRTVRDT
                     INGDHLYRNDNGKFVDVSGQAGIFQ"
     gene            874..1821
                     /locus_tag="VEV83_15710"
     CDS             874..1821
                     /locus_tag="VEV83_15710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46623.1"
                     /translation="MKKWLLLSVAVLCLFFACVYVLIPSTIEISDAVSARTTRDGTFR
                     MLMSENEWAKWWGYALPERNDSEISREIFNYRDYKYNLIKPGFNSAVVSIQHDNNTIN
                     ATITLLQLSIDSIVMLCQCSLDATANPFRKIGRYAAAVDLKKNMEAVLESLKAFVEKD
                     DNIYGLHISEGHAQDTLLITTKRIFTREPGVSDVYAMIDDLRKYAAENKCRQTNPPML
                     NILHEGAKYRVMVAIPIDKEIATQGPISFVKMTNGNFMITQVQGGPGTVQNALQQMQL
                     YFDDYDKTSMAITFQYLVTDRIKEPDTTKWVTKIFAPVM"
     gene            1836..>3043
                     /locus_tag="VEV83_15715"
     CDS             1836..>3043
                     /locus_tag="VEV83_15715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46624.1"
                     /translation="MSSSRTNICMLLISCCLHQVTSFAQNCDSNYFSYEYTASDFLTL
                     SKAVVTPDNSVVCLQTNKFYEHGLIKFTPQGNVIYAYQYTAPFTANGYRSWTPLLFTD
                     VCVASDSVHYLAGSVTKHGLFYDNTETPPARTAAVIAKTDKYGKVIWSRFFANATTDP
                     LAFSNVIALRNGDVVGYLTTQVALPYYGRIICLSTDGTIKWSVILNTGEYSSGNLAPS
                     NKRSLIQTKNGNIVVADVVYKYNTDLTAVGAYHFFSLNPSNGSVTWESSYAYPTNSFY
                     IPDIVSAFELPNGDLSFQSMLIDLTSKPLNIITDSKGIIKKMIATYPLADPASLIDAK
                     PDGSSGEQSLLMLSGGQKSILAKIDNNGNLVWSRKYGKSDAGVPPSCFEKIANGYDIF
                     LSTFSQSFRML"
BASE COUNT          873 a          645 c          650 g          875 t
ORIGIN      
        1 ttgaaagatg ccggcttgtc cacttacatc aacaaatttt ccattgtcat tcctgtacaa
       61 atgatcgcca ttgatcgtat cacgaacggt tcttaaatag ctattgtatc caaagttgct
      121 attaaaatgt gcatcattgt ttagcacgaa gcagtcgaga tcgccgtcgt gatcgtaatc
      181 aaaaaacgtt gcctgggtgg aagggccttt atcatccagc ccgtatcgat gtgcttcttc
      241 tttaaacttt ccgtcatgct cattaaccca tagctcattc gcccggtcgt cgcccggtat
      301 gttcgcgctg ttgcagatat acagatcaag ccagccatcg tggttgatat caaccatcgt
      361 aacaccggta tgccatttat gcgcgctgat tataccagac ttgacactcg catcttcgaa
      421 tttccagtca cccttattga tgaacaattt atttggatgc tggtttgacg taaagaacac
      481 gtcgggcctg ccatcattgt ttacatctcc aatggcaacc ccgccaccgt tgtaaaaatt
      541 atgataggta agaatattca gctcctttgt atctgtaacg ttgttgataa agtttatccc
      601 ggtttctgat gcgggcaaca attgaaaaag agcattttta tcccgatcgt tttgttttgg
      661 attacaggca atgatcaaac agagagcagc aataaaccta gttgaacggt cgtacatatg
      721 tatacgcatt gagcctgtgt gcctgagtgc aactttttgt gttccaaaac tacagtgtaa
      781 atgcttttta aaagaagtta aaaccttaaa attgtttttg taatcctgct ggaaatcttt
      841 actgttttta aaaaacgcgt agtttatttg cgtatgaaaa aatggctgct attgagtgtc
      901 gcagttttgt gtttattttt tgcctgcgtc tatgttctga ttccttctac tattgaaata
      961 tctgatgctg tgtcagcacg cacaacacgg gatggcacgt tccgcatgct gatgtcagag
     1021 aacgaatggg cgaagtggtg gggttacgca ctgccggaaa gaaatgattc ggaaatttca
     1081 agggaaattt ttaattatcg ggattataaa tacaacttaa ttaagcctgg cttcaacagt
     1141 gccgttgttt ctatacagca cgacaataat accatcaatg ccacgataac gttgctccag
     1201 ctttctatcg attcaatcgt catgttgtgc caatgttcac tggacgccac tgccaatcct
     1261 tttagaaaaa tcggccgata tgcagcagca gttgatctaa aaaaaaacat ggaagcagtg
     1321 cttgaatctt tgaaagcatt cgtagaaaaa gatgataata tttatggatt acatatttca
     1381 gaagggcacg cgcaggacac cctgctaatt acaaccaaac ggattttcac acgggaacca
     1441 ggggtgagcg atgtgtatgc gatgatagac gacctgagaa aatatgctgc tgaaaataaa
     1501 tgcaggcaaa cgaacccgcc gatgctgaat attctacacg agggcgccaa atacagggta
     1561 atggtagcca tacccatcga caaagaaatt gcaacgcagg ggccgatttc atttgtaaaa
     1621 atgacgaatg gaaatttcat gataactcag gtgcaaggtg ggccgggaac tgtgcaaaat
     1681 gcattacaac agatgcaatt gtattttgat gattatgata aaacctcgat ggcgataact
     1741 tttcagtatc ttgttacgga caggataaaa gagccggata caacaaaatg ggtaacgaaa
     1801 atatttgcgc cggtaatgta acctttgctg cataaatgag ttcatccagg acaaatattt
     1861 gcatgttgct tattagttgc tgcctgcacc aggtgacatc attcgctcaa aattgtgaca
     1921 gcaattactt ttcttacgaa tacactgcct ctgattttct cactttgtca aaagccgttg
     1981 tcacgccgga caattcggtt gtttgcctcc agacaaataa gttttatgaa catggcctca
     2041 taaagttcac gccccaggga aacgttattt acgcttatca gtacacagca ccatttaccg
     2101 cgaatggtta tcgttcatgg acccccctgc tttttaccga cgtctgcgtt gcttccgatt
     2161 cagtacatta tttagcgggt tctgttacca aacatggttt attctatgac aacacagaaa
     2221 caccgccagc ccgaacggct gcagtaattg cgaagacaga taaatatgga aaagtgatat
     2281 ggagcaggtt ttttgctaac gctactactg atccattggc tttttcaaat gttattgccc
     2341 tgcgcaacgg cgatgtggtg ggatatctta ccacacaggt cgctttgccc tattatggga
     2401 gaatcatttg tttgtcgaca gacggcacca tcaagtggtc tgtgatattg aataccgggg
     2461 aatacagttc cgggaacctt gctccctcga ataaaaggtc tttgatacaa acgaaaaacg
     2521 ggaacattgt tgtggcagat gtcgtttata aatacaatac tgacctgaca gccgttggcg
     2581 cgtatcattt cttttcgcta aatccttcaa acggctctgt gacctgggaa agcagttatg
     2641 cctatccaac aaactcgttt tacattcccg acatagtcag cgcgtttgag ctgccgaacg
     2701 gagatctgtc gtttcaatcg atgttgattg atttgacatc aaagcctttg aatataatca
     2761 ccgatagcaa ggggattatt aaaaagatga tcgccactta tccgctggct gatccggcaa
     2821 gccttattga cgcaaaaccg gatggcagtt ccggtgagca aagccttcta atgctctccg
     2881 gcggtcaaaa atcaatcctg gcaaaaattg acaataacgg aaatttagtt tggagccgaa
     2941 aatacggcaa gtcggatgca ggtgtcccac caagttgttt tgaaaaaatc gcaaatggat
     3001 atgatatctt tttaagcacg ttctcacagt cgttcaggat gct
//
LOCUS       DASQJI010000576         2917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2683529,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000576 DASQJI010000000
VERSION     DASQJI010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2683529"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..679
                     /locus_tag="VEV83_15720"
     CDS             50..679
                     /locus_tag="VEV83_15720"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HYK46625.1"
                     /translation="MITSLPVKTKLYGLVVCGGNSSRMGFDKSMIAYHEEAQWRNLCK
                     MLSDICDRVFISCNESQSQQFNEYETLVDSDRYKNVGPMTAVLTAFSEYPGNDFLVLG
                     CDYPLLSGEHLRSFVQSSKDNPIAAAFYNAEETLFEPLLALYTSKAGPLLLSLFEQGR
                     YSLQYFLGTVDACKYFPTEKKIIKSIDTPGDLEWAKKELQKRQYQLQKI"
     gene            684..1508
                     /gene="fdhD"
                     /locus_tag="VEV83_15725"
     CDS             684..1508
                     /gene="fdhD"
                     /locus_tag="VEV83_15725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HYK46626.1"
                     /translation="MDPTSVAHMTIKKISTDVSVDAEDELAIEEPLAIQLMHGPKGNE
                     IQSTISVTMRTPGNDEELALGFLFTEGIIQSGRQVKDITIIDDNNVLVSLFEDQQPVL
                     KNAERNFYTTSSCGVCGKSSIDAVKTVSQYSDVFDDIHVGANLFYRLENTLRKKQAIF
                     ESTGGLHASALFDLDGNFIMLREDVGRHNALDKLIGAAVKQGDLPLTNSILLLSGRAS
                     FELIQKASMAGIKIIAAVGAPSSLAVQIAEETGITLIGFLRSHRFNIYSCSHRIEI"
     gene            1521..1895
                     /locus_tag="VEV83_15730"
     CDS             1521..1895
                     /locus_tag="VEV83_15730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46627.1"
                     /translation="MKLRINANSIRLRLSKPDVVKLATEGYLEERVSFADKVFSYSLR
                     CKAGIHKLSANFKAGKINVFVPKVLIKDWADNDVVGFDTYMPIGENDSLYILVEKDFK
                     CIEKSAEDQSDNYENPNKITET"
     gene            1892..>2917
                     /locus_tag="VEV83_15735"
     CDS             1892..>2917
                     /locus_tag="VEV83_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYK46628.1"
                     /translation="MSDDMHHEGAENPEKLTGLKKGKVKKAAAGFEAVVSGSKMMFKE
                     AGITRGLKAMRHLNKRHGFDCPSCAWPDPDDERSRIAEYCENGAKAVAEEATTKKLTA
                     AFFAKNSVKDLAALNDHDIGKKGRIAQPVYLPAGATHYQPLSWDEAFKKIATALNNVS
                     SPDEAIFYTSGRTSNEAAFLYQLFVREFGTNNLPDCSNMCHESSGIALTESLGIGKGS
                     VKLEDIYQAEVIIILGQNPGTNHPRMLTALQKAKDNGAIVIAVNPLPETGLMAFNNPQ
                     QVKGMLGMSTALTDIFLQVKINGDMPLLQALEKLLIEEDEKERGAALDQEFIEKKTFG
                     FDDLKQHL"
BASE COUNT          903 a          575 c          692 g          747 t
ORIGIN      
        1 gttctttcgt tgatgcctga ataaattcag tagtaacttt gatggtataa tgatcaccag
       61 cttgccggtc aaaacaaaat tatatggcct cgtagtatgc ggcggaaaca gcagccgcat
      121 ggggtttgat aaaagtatga tcgcatatca tgaagaagcc cagtggcgta atctgtgtaa
      181 aatgctttcc gatatatgtg accgggtttt tatttcgtgc aacgaatcgc agtcgcaaca
      241 gttcaacgag tatgaaactt tggttgattc agatcgctat aaaaatgttg ggccgatgac
      301 agcagtattg actgcgttta gcgagtatcc cggaaacgat ttcctggttc ttgggtgtga
      361 ttatcctttg ctatccggcg aacacttacg atcattcgtc cagtcgtcga aagacaatcc
      421 gatcgcggct gcattctaca atgccgaaga gaccttattt gaacctttgc ttgcattata
      481 tacttcgaaa gcaggaccgt tgcttttaag cttgttcgaa caaggccggt attctctgca
      541 atattttctc ggaactgttg atgcatgcaa atatttcccg actgagaaaa aaataattaa
      601 aagcattgat acacctggag atcttgaatg ggcaaaaaag gaattacaaa aacgacaata
      661 tcagctacaa aaaatttaat ggcatggatc ctacatcggt cgcccatatg acgataaaaa
      721 aaataagtac cgacgtatct gttgatgcgg aagacgaact ggcgatcgaa gagccgctgg
      781 caattcaatt aatgcacggg cccaaaggga atgagataca aagcaccatt tctgttacca
      841 tgcgtacgcc gggcaacgat gaggaactgg ccctgggatt tttgtttact gaaggaatta
      901 ttcagagcgg aaggcaggta aaggatatta cgatcataga tgacaataat gtattggttt
      961 ctttattcga agatcagcag ccggtgctaa aaaatgcaga gcgaaatttt tacacaacat
     1021 cgagttgcgg cgtttgcggt aaatcgagta tagatgcggt caaaacagta tcacaataca
     1081 gtgatgtttt tgatgatatt catgtcggag cgaacttgtt ttaccggctt gaaaacacgt
     1141 taaggaaaaa acaggcaata tttgaaagta ccggtggttt gcatgcgtct gcattatttg
     1201 atcttgatgg aaactttatc atgctgcgtg aagatgttgg ccgtcataac gcgttggata
     1261 agttaatcgg tgcagccgtg aaacagggcg atctgccgtt gacgaattca attttattac
     1321 taagcggcag agcaagtttc gaattgatcc agaaagcgtc gatggccggc ataaaaataa
     1381 tcgctgccgt tggtgcaccg tcaagccttg cggttcaaat cgcagaagaa acaggcataa
     1441 cattgatcgg atttttacga agccatcgtt tcaatattta ttcgtgttca cataggatcg
     1501 aaatatagtt cgtagcaatt atgaaattaa ggatcaatgc aaattcaata agattgcgtt
     1561 tgtcaaaacc cgatgtagtt aaactggcga ctgagggata ccttgaagaa cgtgtatcat
     1621 tcgcagataa agtcttcagt tattcgttac gatgcaaggc cggtatacac aaactctccg
     1681 caaattttaa agcgggcaag ataaatgtgt tcgtgcctaa ggtattgata aaagattggg
     1741 ccgacaatga tgtggtaggc tttgatacct acatgccgat cggagaaaac gattcgttat
     1801 atattttggt ggagaaagat tttaaatgca tcgaaaaaag cgccgaagat cagtctgaca
     1861 attacgaaaa cccaaacaag ataacagaga catgagtgat gatatgcacc atgaaggtgc
     1921 cgagaaccct gaaaagttga ccggcctcaa aaaaggtaaa gtaaaaaagg ccgctgcggg
     1981 ctttgaagct gttgtttccg gcagcaagat gatgttcaaa gaagcaggca tcacacgcgg
     2041 gttaaaagcg atgaggcatc tgaacaaacg acatggcttt gattgcccaa gctgtgcatg
     2101 gcctgacccg gatgatgaac gttcacgaat tgctgagtat tgcgaaaatg gtgcgaaggc
     2161 tgtcgcagag gaagcaacga caaaaaaatt gaccgctgca ttctttgcaa agaattctgt
     2221 gaaggacctc gctgcgttga acgatcatga cattggcaag aaaggccgca tcgctcaacc
     2281 cgtgtatttg cctgcaggtg ctactcacta ccaacctctc tcatgggacg aagctttcaa
     2341 aaagatcgca accgcattaa ataatgtttc ctcaccggac gaagcgatct tttatacatc
     2401 cggtcgcacg agtaacgaag ctgcattttt gtatcaactt ttcgttagag aatttggaac
     2461 aaacaattta cccgactgca gtaacatgtg ccacgaaagc agcggtattg cattaaccga
     2521 atcgttgggg ataggcaaag gatcagtgaa gcttgaagat atttaccagg ccgaagtgat
     2581 aattatcctt gggcaaaacc ccggcaccaa tcatccgcgc atgcttacgg ctttacaaaa
     2641 agcaaaagac aacggagcga tcgtcatcgc ggtaaaccct ttgcctgaaa cgggtttgat
     2701 ggccttcaat aatccgcagc aagtaaaagg tatgctcggt atgagcacgg cactgactga
     2761 catctttttg caggtaaaga tcaatggtga tatgcctttg ttacaggcgc tcgaaaaact
     2821 gctgattgaa gaggatgaaa aggaacgcgg cgctgcgctc gatcaggaat tcatagaaaa
     2881 aaagactttc ggatttgatg accttaaaca acatctg
//
LOCUS       DASQJI010000577         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2684142,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000577 DASQJI010000000
VERSION     DASQJI010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2684142"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..1069
                     /gene="ribD"
                     /locus_tag="VEV83_15740"
     CDS             26..1069
                     /gene="ribD"
                     /locus_tag="VEV83_15740"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HYK46629.1"
                     /translation="MHRCLQLAMLGAGHVAPNPMVGAVLVHNGRIIGEGYHREYGKAH
                     AEVNCIESVAEADKHLIVDSTLYVNLEPCAHFGKTPPCTDLIIKNNIPNVVVGSVDPF
                     EHVDGKGIERLRQAGVEVITGILEHECKNLNRRFFTFHTKHRPFIILKWAETADSKIA
                     GIGDKRLVISGDLTNRLVHKWRSEEAAILVGTNTALSDDPQLNNRLWVGKNPIRLVVD
                     MDLKLPPALKIFNTDHPTIVFNLKKNTIELSEELQAGPNYYQVTADVSVVHQVLNACY
                     QLNIQSILVEGGAKLLQSFADENLWDETRIITNQNLFIGKGLCAPLLTNASQFLSEQI
                     DHDTIGYFKNQNT"
     gene            1202..1627
                     /locus_tag="VEV83_15745"
     CDS             1202..1627
                     /locus_tag="VEV83_15745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46630.1"
                     /translation="MKPEQRGQLFILETLIDGVELIPADVYAAVHPYMSYKQASESMQ
                     GLYSSENITTVEPETKPRDAYIRANKQYRITEIGINYCNFLREERDIRITDNANKYFN
                     TQNAKRVYRNYTLNQIILWTSFAISLGLAILKLVELAKK"
BASE COUNT          570 a          374 c          385 g          476 t
ORIGIN      
        1 ttgatacatg caccacgaga tttatatgca ccgatgttta caactagcca tgctgggcgc
       61 tggccatgtt gcaccgaatc caatggtcgg cgctgtgctg gtgcataatg gccggatcat
      121 cggggaggga tatcatcgcg agtatgggaa agcacatgct gaggtcaatt gtattgaatc
      181 ggtcgccgaa gctgataaac atctgatcgt cgactcaact ttatatgtca acctcgaacc
      241 ttgtgcgcat tttggcaaga cgccgccatg cacggacctg atcatcaaaa ataatattcc
      301 caatgtcgtg gtcggcagcg tggacccctt tgaacacgtg gacggaaaag gtattgagcg
      361 attaaggcag gcaggcgtgg aagtgatcac cgggattctt gagcatgaat gcaaaaatct
      421 aaacagaagg ttcttcacgt ttcatacgaa acaccgtcct tttataattc ttaaatgggc
      481 agaaactgcc gacagcaaaa ttgcaggcat cggcgataaa cgtttggtga tcagcggtga
      541 tcttacgaat agattggttc ataaatggcg ttctgaagaa gcagcgatac tggttggtac
      601 aaacaccgcc ctgagcgatg atccgcagtt aaacaaccgg ctctgggttg gtaagaatcc
      661 tattcgtttg gtcgtggaca tggaccttaa attaccgccg gcgctaaaaa tctttaatac
      721 cgatcacccg acaatcgtct ttaatctcaa aaaaaatacc atcgaacttt cggaggagct
      781 gcaggccggt ccaaattatt accaggtgac ggctgacgtc agcgttgttc accaggtttt
      841 aaatgcttgt taccaattga acattcaaag tattttggtt gaaggcggcg caaagttgct
      901 gcaatctttt gccgacgaaa atttgtggga tgaaacgcgc atcatcacga atcagaattt
      961 atttattggc aaaggattgt gtgcgccgtt actcacgaat gcttcacaat ttctaagcga
     1021 gcaaatcgat cacgacacca tcggctactt caaaaaccag aacacctaac ttgcctataa
     1081 ttaatattat gttaagtagc acgcacgggc tctcccacaa gaaaaaataa aagccctccg
     1141 caccgtagtt cgtgggaact tccaccctgt ttatagatta cattagcggt gtaatatttt
     1201 tatgaaacca gagcagcgag gacaactgtt tattttagaa acgctaattg acggagttga
     1261 attaataccc gctgatgtat atgccgcggt acatccatat atgagttata aacaagcgtc
     1321 agaatcaatg cagggtttat atagttctga aaatataaca actgttgaac cggaaaccaa
     1381 accgagagac gcatatataa gagctaacaa acaatatcga attactgaaa tcggcattaa
     1441 ctattgtaat tttttaagag aagaaagaga catacggata acggataatg caaataagta
     1501 tttcaatact caaaatgcaa aaagagtata tcgaaactat actttaaatc aaattattct
     1561 gtggacgagc ttcgctattt ctttagggtt agcaattcta aaattagtag agttagcaaa
     1621 gaaataaaca ttccgtaaag aggaatatca ctccagaaga ttcgcaacaa taattttttc
     1681 aaaatttatt agactcattg gttttaccgc agtttagaaa actggcaaaa cacatgcgcc
     1741 taataactat cctacacagt cctcatttaa atagatggcg tcggctatcg cctccgagtg
     1801 tttcc
//
LOCUS       DASQJI010000578         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_686591,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000578 DASQJI010000000
VERSION     DASQJI010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686591"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2051)
                     /locus_tag="VEV83_15750"
     CDS             complement(<1..2051)
                     /locus_tag="VEV83_15750"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK46631.1"
                     /translation="MFGSFMTNRTGQLTVQAYYERLGDRLEQHFLAGKSDLFLFIFRL
                     VQFYMPSSRQLTAIMFADIAGYTSLMQEDEAMALELRNKFLQKIGEETSAHNGRILDI
                     KGDGALCSFASTIEAVKAAISLQLEMQADPVVPLRIGMHAGDVIMEATNIYGDGVNIA
                     SRVESFAVPGSIFISGKVYDDVKNQKDIQAISLGKYMLKNVRDEMELFAISNPGIKIP
                     DKNKLQGKGEKVGENLRSKCVMVLPFVNMSNDPEQEYFSDGLTEELISKLATVRDLRV
                     ISRTTSMQYKGTKKGARTIGSENDVNYIVEGSVRTAGNNLRITAQFIDADRDIHLWAE
                     TYRGTMDDIFDIQERVSEKIVEALRIQLTRDEQSILGKRYTENTAAYQLYLKGRHFWK
                     ERNEEGLEKAANHFQKALEIDPDYALAWVGLADTYSLMGEYSNVSRRILFPKQMAAVN
                     RALELDNRLGEAHISLAISLMLNEWDWKNSEKEYKLGIELSPTYATGHHWYGEWLLFN
                     GKIEEAFEEINIAVELEPLSPGILKDKGIFYYYRKQYNQAINMGLMTLEVKPDFAPAY
                     RLLSLSYAGLKMFDEAISNNERWRELTGNKTKTDIALAEIYALANRNEEAKKIISSID
                     TDEPLSGNDYRGMALVYIALGEHDLALTWLEKSYAHHEESLCSIKVDAKWDPIRSERR
                     FT"
     gene            2363..>2559
                     /locus_tag="VEV83_15755"
     CDS             2363..>2559
                     /locus_tag="VEV83_15755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46632.1"
                     /translation="MKKFFGPLFFCLFSIPLVMNAQTNARQKDTVATANPSYDKAGGF
                     KRLFLGQHYRKEWATPVRMKIL"
BASE COUNT          658 a          618 c          501 g          782 t
ORIGIN      
        1 gtgaagcgcc gctccgagcg gatcgggtcc catttagcat caactttaat gctgcacaac
       61 gattcttcat gatgcgcata acttttttca agccacgtta acgcgaggtc atgttcgccg
      121 agggcaatgt acaccagcgc catgccacga taatcgtttc cgctcaaagg ctcatccgtg
      181 tcgattgagc ttattatttt ttttgcttct tcgtttcggt tcgcaagcgc atagatctcg
      241 gcaagggcga tatcagtttt tgttttattg cctgtgagtt cgcgccagcg ctcgttgttt
      301 gaaattgctt catcaaacat cttgagcccc gcatatgaaa gtgaaaggag ccgataggca
      361 ggtgcgaaat ccggtttcac ttccagcgtc atcaatccca tattgatcgc ctggttatac
      421 tgtttcctgt agtaataaaa aatgcctttg tcctttaaga tgcccggcga aagtggctcc
      481 aattcaacgg cgatatttat ttcttcgaac gcttcttcga tctttccgtt aaacagcaac
      541 cactcaccgt accaatgatg acccgttgcg tatgttggac ttaattctat tcccagctta
      601 tattcttttt ctgagttttt ccaatcccat tcattcaaca taagagagat cgcaagcgaa
      661 atgtgcgctt ctccgaggcg gttgtctaat tcaagcgccc tgttaaccgc tgccatttgt
      721 tttggaaaaa gtattcttct cgacacgttg ctatattcac ccatcaggct gtatgtgtct
      781 gcgagtccga cccatgccaa cgcgtaatca ggatcgatct caagagcttt ctgaaaatga
      841 ttagcggctt tctcaaggcc ttcctcattt ctttctttcc aaaagtgacg gcccttaaga
      901 taaagctgat acgcagcagt gttttctgtg taacgcttgc ccaatatact ttgctcgtca
      961 cgcgtgagct gtatgcgtaa ggcctcgaca attttttcag acacacgttc ctggatatca
     1021 aaaatgtcgt ccatcgttcc gcggtatgtt tcagcccaca ggtgaatgtc cctgtccgca
     1081 tcaatgaatt gtgcagtgat cctcagatta tttcctgcgg ttctcacact tccttccacg
     1141 atatagttca cgtcgttttc gctgccaatt gtcctcgcac ctttttttgt acccttgtat
     1201 tgcatcgatg ttgttctcga tatcaccctc aggtccctta cagttgccaa tttcgagatg
     1261 agttcttcag taagtccgtc gctgaaatat tcctgttcag gatcattact catgtttaca
     1321 aagggtaaga ccatcacaca tttcgatcgc aaattttccc cgactttttc acccttgcct
     1381 tgcaatttat tcttgtccgg gatctttatg cccggattac tgatcgcaaa aagttccatt
     1441 tcgtcgcgca cattttttag catgtacttt ccaagtgaga ttgcctgaat gtctttttga
     1501 tttttcacat catcatacac ttttccggaa ataaaaatgc ttccgggaac agcaaacgac
     1561 tcaacccgcg aggcgatgtt cactccgtcc ccataaatat tagttgcttc catgatcaca
     1621 tcaccggcat gcatgccaat tcttagtggc acaacgggat cagcctgcat ttcaagctgc
     1681 aggctgatcg ctgcttttac agcttcgatg gtgctggcaa agctgcacaa tgcaccgtca
     1741 cctttaatat ccagtatccg gccgttatga gctgatgttt cttcaccgat cttttgcagg
     1801 aacttgtttc ttagctctaa cgccattgcc tcatcttcct gcatcaaaga agtataaccg
     1861 gcaatatctg caaacatgat ggccgtaagt tgtcgtgacg aaggcatata aaattgtaca
     1921 agccgaaaga taaataaaaa aaggtcagac ttacccgcga gaaaatgctg ttctaaacga
     1981 tcgccgagac gttcgtaata tgcctgaact gttagctgtc ctgtccgatt agtcatgaat
     2041 gatccgaaca tcaggaactt ttccacctaa tatttctatt gccaattaaa tcttcacttc
     2101 aatcaaggtg gtataaaaag atcaattttg ctccttccga tatttcagct ggccgcgaga
     2161 tatcgtatcg gaacatctga tccgatttat tggaaaattc taaaaagctt tttccaaact
     2221 ttcgtgtaaa caaaaaaaat tctatattaa aagcgcagaa atgactgcat gattatttaa
     2281 tgcattaaaa tgacgtagtt tatcttcgga cgagtcgaac cacataaaga gcatggttta
     2341 aaaaatctaa aaacactgaa cgatgaaaaa gttttttggt ccgctttttt tctgcttgtt
     2401 ttcaattccc cttgtaatga acgcgcaaac aaatgcaagg caaaaggata cagtcgccac
     2461 ggcaaacccg tcttatgata aagctggagg ctttaagcgt ttgttcctcg gccagcatta
     2521 caggaaggag tgggcgacgc ccgttcgaat gaaaattct
//
LOCUS       DASQJI010000579        13041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1916472,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000579 DASQJI010000000
VERSION     DASQJI010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13041
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1916472"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VEV83_15760"
     CDS             complement(<1..182)
                     /locus_tag="VEV83_15760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HYK46633.1"
                     /translation="MRNIIAFIRQFFNFFLFLVLLGASLIILINYNQTYQAVFSNIAN
                     ETTGKVGSQYNKVEYY"
     gene            complement(291..1316)
                     /locus_tag="VEV83_15765"
     CDS             complement(291..1316)
                     /locus_tag="VEV83_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HYK46634.1"
                     /translation="MGLFNFFTQEIAIDLGTANTLIIHNDEVVVNEPSIVALNRNNPK
                     EVLAVGKRALMMHEKTHESIRTVRPLKDGVIADFNAAELMIKEMIKMIYPKKPWIAPR
                     WRMVICIPSSITEVEKRAVRDSAEQAGATEVYLIHEPMSAALGIGIDVEEPVGNMIID
                     IGGGTTGITVIALAGIVCDQSIRIAGDEFTADIMEALRRYHSLLIGERTAEQIKITIG
                     AAMKDLESPPEDMPVNGRDLVTGIPKQIMVSYQEVAEAIDKSIFKIEEAILKALETTP
                     PELAADIYRRGLYLTGGGALLRGLDKRLSQKIKLPVHVADDPLISVVRGTGLALKNYQ
                     RFPFVMK"
     gene            complement(1513..2808)
                     /gene="purD"
                     /locus_tag="VEV83_15770"
     CDS             complement(1513..2808)
                     /gene="purD"
                     /locus_tag="VEV83_15770"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HYK46635.1"
                     /translation="MNILLLGSGGREHAMAWKMVQSEHCHQLFIAPGNAGTSQCGKNV
                     NISVNDFDAIKNFSIENNIELIVVGPEEPLVKGIFDYFNSSNNSPSKKINVMGPSSAG
                     AQLEGSKAFSKKFMQRHNVPTASYGEFTKENFEEGKKYIQQHSLPVVLKADGLAAGKG
                     VVISNTHEEALKAFEEMIIHEQFGEASSRVVIEQHLDGIELSVFVLTDGKNYKIIGHA
                     KDYKRIGEGDRGLNTGGMGCVSPLPFVDEAFMKKIETRIIQPTVKGLEAEKIIYKGFI
                     FFGLIKVNDEPFLIEYNCRMGDPETEVVLPRLKNDLVELFLALENGALQEALIEFDER
                     ACATIVAVSAGYPGTYEKNKAINFPGKPLLADETIIFHAGTTSTSDGRILTNGGRVLA
                     ITSFGRNIADAAQVSRDLLAKIDFEGMYYRRDIGYEFEK"
     gene            2934..4709
                     /locus_tag="VEV83_15775"
     CDS             2934..4709
                     /locus_tag="VEV83_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HYK46636.1"
                     /translation="MQQKSGRHPRALYVLFMTEMWERFAYYLMVGILLLYMIDNKTGG
                     KGLDEKTGADIVGSFIALVYLTPFIGGLIADRYLGYTKSIFLGGSLMAAGYFGLSLPG
                     NTAMFISLGLVIVGNGFFKPNISTLLGNIYNRDDLKPLKDNAYNIFYMGINIGAFICN
                     FVAAYLRNRYGWGYAFAAAGVGLIIGLINLSISLKHVKVGDVKKPIQPEDMPLSKIFT
                     TVFLPAIIAAIIGWIVPTKLFHTTIMGSQANDAFIFACIPIIAFYVSLWLKAKGGDKR
                     GIGALLFIFAIAIVFWTIYNQNSTGLTLWAEKHTDREVSGVTKKGMGLLGSLQHVTDT
                     PRLVNKVDQYFVDVRDKSQVLSLDSIVTARTQNGKSDTSKILYGITAQGNKVDTSTKV
                     VKVMGPDPYFNNVPKEKWPQGKDVELMNTELFQSINPLFIVVLTLIFINLFDYMRRRG
                     KEPTTASKFCMAMFISGLSALVMVFAVMSVPSVYQYKTSPAWLWGTYGVFTVSEIFLS
                     PIGLSLVSKLAPPRLTALMMGGWFLSTSLGGKIAGVMTSFWDDFTDKKIFFGALFIAA
                     TIGGILIYTRLKSLNSIVREKTGSA"
     gene            4769..6835
                     /locus_tag="VEV83_15780"
     CDS             4769..6835
                     /locus_tag="VEV83_15780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HYK46637.1"
                     /translation="MPELKSFKPFVAPETHMKEFTVKAVVMGCIMGCLFGAANVYLAL
                     RAGLTVSASIPIAVIAITVGRRLLKTTILENNIIQTTGSASESIASGVAFTLPGFLFL
                     SMVNGQSVGANFFNYVTILILAIFGGLLGTLMMIPLRRSLIVKEHGTLPYPEGTACAA
                     VLKAGEKGGDIARTAFIGVGVAMLYAFLQRILHIIAEVPEYTTKLTNKYFPAAKISGE
                     ITPEYLGVGYIIGPRISGALVAGGVLSWLVLNPLLATLIQDQTLIASQLVKLGYLKDV
                     ATAGGPGAWDPATHQFADTASAIYRAYIRQVGAGAVAAGGFITLMKTIPTIISSFKES
                     IGSIRNRSEGDTRLRTERDLSLKVVLFGSLALVILMAFIPMIPGDSIGSKLLLGVLVV
                     IFGAFFVTVSSRIVGIIGSSNNPISGMTIATVMSTCLVFIGIGWSGKTYEPMVLVVGG
                     MICIAAANAGATSQDLKTGFIVGSTPRNQQIALFIGAIVSSLVIGLTIKVLDKPTAEM
                     VQQGFTHAIGTDKFPGPQATLMATLIKGILSFNLDWQFVFVGVALAVVMELCGVNSLS
                     FAVGAYLPLSTTLPIFCGGVIRGFVDWRKKRRGEIAAEDDLGKGNLFATGLVAGGALA
                     GVIVALLIAGSDNIAAKLETINLEGKLEEAIGIGGYQLLGVIGFAVLGILLYRTAMKK
                     HPEVEI"
     gene            complement(6832..7947)
                     /locus_tag="VEV83_15785"
     CDS             complement(6832..7947)
                     /locus_tag="VEV83_15785"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYK46638.1"
                     /translation="MFDSERTKILIITSEFPPDAGGIGNHAFNLALHLAKRNFSVTVV
                     ADIVYASKQEIENTEWVRKINFAPVYRKRIVLASYYNRVQRAITLSKRSDVIFLSGKF
                     PLWLSSMLRMLYPSKKIIAIVHGTELRERFINFNLKKCDRIIAVSNFTLSLIPSFIKT
                     TIEICVISNGIDIDEFADAQVRPRKKTSKENLQLITVGSVTERKGQRNVINALPTIIR
                     RFPHVCYHMVGQPVLQKELQQLAIEKNLQAHIKFYGAVSREKLIQLLADGDIKLMLST
                     NTSSGDVEGFGIAILEANALGIPAIGSKNTGIEDAIRNNETGILVDPKNPREVSQAIE
                     KVLADYEFFSANAKRWAMQHDWKILIDRYIEIIESVF"
     gene            complement(7992..8993)
                     /locus_tag="VEV83_15790"
     CDS             complement(7992..8993)
                     /locus_tag="VEV83_15790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46639.1"
                     /translation="MWVVLVTALMLLVDCTKLDSDVSRLGSANNSSATLIDTAKVPIN
                     DLGTGTYLGFTGGLYPGGVDTPSGQYAKDLKKFARAIVPLNASGVKDSSSNGTIVFIS
                     LGGSTSGNLINALKAKTDSNPATNAFLNIFSCSNGYSSASFNSMMNPNDPYWSHVDNV
                     LAGHSITHEQVQIIYVESEDSTNLVFFPGRAYRVRNEIEACMRICKIKFPNIRLVYVE
                     GRTTTFHKYEIPNREPSPYYNGWGEKFVIQDQINGVPGTQYKGDSAVAPLVTWGWYQW
                     ANGTTKPRKDGFRWLESETTDGLHATDAGEDTLATRFQNFLLTDKYAKIWYANHTKH"
     gene            complement(9286..10290)
                     /locus_tag="VEV83_15795"
     CDS             complement(9286..10290)
                     /locus_tag="VEV83_15795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46640.1"
                     /translation="MKTSAFRVIVWLVVFAACQKTSEVNHPSGMSAANSVAFTDTIKI
                     PINDLATGTYLGYTGGLYPAGIDTPSGQYAKDLLRFATKIKPLDSSGKASDTGKVLFI
                     SLGASTGGNNMKALILKTAGNPKTNPFLFLLNCNNGAGTATLNNIANPNDQYWDHVSL
                     ILRSHHVGYKQVQVIYFETDDSLPVNSFPDRANIVRDNFSKAMQVCKSKFKHLKLVYV
                     LGRTTTFDKILVQNQEPCPYYNGWGYKFYIQDQINGIAATRYKGDSAVAPLVTWGWYQ
                     WADGTTTPRLDGFVWTKDMTVDGMHADSTGQDTLATRFQNFLLTDRYANVWYANHTKP
                     "
     gene            complement(10387..11391)
                     /locus_tag="VEV83_15800"
     CDS             complement(10387..11391)
                     /locus_tag="VEV83_15800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46641.1"
                     /translation="MKRYIVSAASLFLAFLSCNKDQMNTVSSDDTKNNAVALTDTVKV
                     PLIDLGTGTYFGYTGGLYPGGVNSPSGQYKKDLKAFAVAIKPLSGSGIVDSTVGKILF
                     ISMGGSTGGRNMDSLKAKTLRYAKKNPYLKLINACNGGGDASLQQIAAPNTDYWTHVS
                     QVILGAHSTLKQVQVVYLESEDSLSTILDFPARPNQYKVDLEAAIRTCKVKLPNLKLV
                     YVLGRTTTFGTTKTTNSEPCPYYNGWGDKFMIEDQINGVPGTEYKGTNAVAPMVTWAF
                     YQWTNGSTVPRTTDGFVFDESLSYDGVHATPEGQDSLSTRFQNFLITDKIANIWYKKH
                     "
     gene            complement(11529..12545)
                     /locus_tag="VEV83_15805"
     CDS             complement(11529..12545)
                     /locus_tag="VEV83_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46642.1"
                     /translation="MKTNKFLLLVILVFSACSKQDSNAIRSGAVNNSATVFTDTVMVP
                     INDLGTGTYFGFTAGLYPGGLNYPTLQYKKDLKTFASAIKPLNGSGAVDSAVGKIVFI
                     SLGGSTSGHLMRVLKDSTINDVNTNPFLKLINCSDGSGTASFESISNPNDSYWDHVSN
                     VIITSRAYPKQVQVIYMETEDSIQVTTFPNRPNAVKGNIEAAVRTCKLKYPNLKLVYF
                     LGRTTTFPDSTNNLTQTTNKEPCLYYNGWACKFAIEDQINGAPGTEYKGSNPVAPIMT
                     WGWYEWANGTNVPRQDGFTWQASDTKDGLHATDAGEDTLVHRFKTFLMTDTYAKIWYK
                     KKRK"
BASE COUNT         3402 a         2827 c         2845 g         3967 t
ORIGIN      
        1 aaatagtatt ctactttgtt gtattgtgat ccgaccttac cggtggtctc attggcaatg
       61 tttgaaaaca ctgcctggta agtttgattg taattaataa ggatgatcag ggacgctccc
      121 agcaaaacga ggaacagaaa gaaattgaaa aactggcgta tgaatgcaat gatgttccgc
      181 aaactagaaa aattccaaat ttcaaattcc aatttccaaa caaataccaa gcctcaaaag
      241 acgacagcct atttgatttt tggaattcgg ttcctggatt tttttacaaa ttatttcatg
      301 acgaatggga accgctgata atttttcagg gctaaacccg ttcctcttac aacgctgatg
      361 agcgggtcgt cagctacatg caccggcaat tttattttct ggctcaggcg cttgtcgagt
      421 ccgcgcagca aggcgccccc acctgtcaaa tagagtcctc tgcggtaaat atcggcggct
      481 aattccggag gagttgtttc gagggctttc agaatagctt cttcaatttt gaagatcgac
      541 ttgtcgatgg cttctgcaac ttcctggtaa cttaccatga tctgttttgg aatacccgtg
      601 acaagatcgc gaccatttac aggcatgtct tcagggggtg actcgagatc cttcatggca
      661 gccccgattg tgatctttat ctgttcggcc gtacgttcac cgatcagcag gctatgatag
      721 cgacgcagcg cttccatgat gtctgcggta aactcgtcgc ccgcgatccg tatgctttgg
      781 tcgcacacga tccctgcaag tgcgatcacc gtaatccccg ttgtaccacc cccaatgtcg
      841 atgatcatgt taccgaccgg ctcttccaca tcgatgccaa taccaagcgc tgccgacata
      901 ggttcgtgta tcaggtaaac ttctgttgcg ccagcctgtt ctgcactgtc gcgcacagcg
      961 cgcttttcta cttctgttat acttgatgga atacagatca ccattctcca gcggggtgca
     1021 atccatggtt tttttggata gatcatcttg atcatctcct tgatcatcaa ttcggcggca
     1081 ttaaaatcgg caataacccc atctttcaaa ggccggacag tgcgtatgct ttcatgcgtt
     1141 ttttcatgca tcatcaaagc acgttttccc actgcgagca cttctttagg attgttacgg
     1201 tttaatgcaa ctatggaagg ttcatttact actacttcat cgttatgtat gatcagtgta
     1261 tttgcagtcc ccagatcgat ggcaatttct tgcgtgaaaa aattaaaaag tcccattatc
     1321 tcaaagattc cttaaatttt ttttaatgcc gcaaagttgt aagaaataat ccgaattgac
     1381 aaagctgtat ttgagcaatt ttgacgggtt tagttaatat tcacatcagg ttttttttag
     1441 gttaccaagt ttatttggta acctccgtta gaaatagtat taaacatttg aaaataaagg
     1501 gaaacaaagc ctttattttt caaactcata tcctatatcc cggcgataat acattccttc
     1561 aaaatcgatc tttgccagca aatcccggga aacttgcgct gcatcggcaa tattcctgcc
     1621 aaatgatgtg atcgccagta cacggcctcc gttcgtgaga atcctgccat cgctggttga
     1681 ggttgtacct gcatgaaaaa ttattgtctc atccgccagc aaaggcttgc ctggaaaatt
     1741 gattgccttg ttcttttcat aagtgcctgg ataacctgca ctaacagcaa cgatggttgc
     1801 gcatgccctc tcgtcaaact caattaacgc ttcctgtaaa gcgccgtttt caagcgcaag
     1861 gaataattca accaaatcat tttttaaacg aggcaacaca acttctgttt caggatcgcc
     1921 catgcggcag ttatattcta tcaggaacgg ttcgtcattc acttttatta aaccgaaaaa
     1981 gataaagcct ttgtaaatta ttttttcggc ttccagtcct ttgaccgttg gctgaataat
     2041 tctcgtttcg atttttttca tgaacgcttc gtcaacaaaa ggcaacgggc tcacgcagcc
     2101 cataccgccg gtgttcaaac ctctgtctcc ttcgccaatg cgtttgtaat cctttgcgtg
     2161 accgatgatc ttataatttt ttccgtcagt taaaacaaaa acactcaact ctatgccgtc
     2221 aagatgttgt tcgatcacaa cccgtgacga tgcttcgcca aattgttcat ggatgatcat
     2281 ttcctcaaac gctttcaatg cttcttcatg tgtatttgaa atcacaacac cttttccggc
     2341 tgcaaggcca tccgctttta agacaacagg caaactatgt tgctgaatat atttttttcc
     2401 ttcttcaaaa ttttcttttg tgaactcacc atacgatgca gttggaacat tgtgtcgctg
     2461 cataaatttt ttggagaagg ccttacttcc ttctaattgt gcacccgcac ttgaggggcc
     2521 catgacgttt attttttttg aaggtgaatt attcgaactg ttgaagtaat caaagatgcc
     2581 ttttactaat ggttcttccg gacctacgac gatgagttca atattgtttt cgatagaaaa
     2641 attttttatt gcgtcaaaat cgtttacgct gatgtttacg tttttcccgc actgtgatgt
     2701 gcctgcattg cccggagcaa taaacagttg atgacaatgt tcactttgaa ccatcttcca
     2761 cgccattgcg tgttcccttc ctccgctgcc gagtaaaaga atattcattc gttcaacatt
     2821 attaagcggc gaaagtaaac gttttatgct ttctcagaat ttgaattcgt ttattgaaat
     2881 ttctgcttat tttgagcgct ggtacgcttc aattactcta acgaaatcag tttatgcagc
     2941 aaaaatcagg aagacatcca agagccttgt atgtattgtt tatgactgaa atgtgggaac
     3001 gcttcgcata ctacctaatg gttggaattt tattattgta tatgatcgat aacaagaccg
     3061 gcggcaaggg tcttgatgaa aagaccggcg ctgatatcgt gggaagtttt attgcgctgg
     3121 tgtatttaac tccttttata ggtggcttga tagcggatcg ctatttagga tatacgaaat
     3181 cgattttttt aggtggcagt ttaatggcgg cgggttattt tggtttgtct cttccgggta
     3241 atacggccat gtttatttct cttggattgg tgattgtggg caatggcttt tttaaaccta
     3301 atatttcaac gctgctcggt aatatttaca atcgggacga tctaaaacct ctaaaggata
     3361 atgcgtacaa cattttttat atggggatta atattggtgc gttcatttgc aatttcgtcg
     3421 ctgcgtacct gcgcaatagg tacggatggg gttatgcttt tgctgccgca ggagttgggt
     3481 taataatcgg attgattaac ctcagcatat ctctgaaaca tgtgaaagtt ggcgacgtaa
     3541 aaaaacccat acagcctgag gacatgccat tgtcaaaaat tttcacaact gtttttttgc
     3601 ctgcgatcat tgctgcaata attggctgga tagttcccac gaaattgttt cataccacga
     3661 tcatgggcag tcaggcaaat gatgcgttta tttttgcatg tattccgatc attgcctttt
     3721 acgtttctct ttggctaaag gctaagggag gagacaaacg tggcattggt gcgcttcttt
     3781 tcatattcgc catagcgatc gttttttgga ccatatataa ccaaaactcc acaggcctta
     3841 cgttgtgggc tgaaaaacat acagacaggg aggtatcagg agttacaaaa aagggaatgg
     3901 gtcttctcgg atcattacag catgtgaccg acacgccgcg gcttgtgaat aaggttgatc
     3961 agtatttcgt agatgttcgc gataaaagtc aagtcctaag tcttgacagt attgtaacgg
     4021 caagaacaca aaatggcaaa tccgatacct cgaaaatatt atatgggata accgcacagg
     4081 gcaataaagt tgacacaagc acaaaagttg tgaaggtaat gggaccagat ccgtatttta
     4141 ataatgttcc taaggagaaa tggccccagg gcaaagatgt agagttgatg aatactgaac
     4201 tttttcaatc cattaacccg ttatttattg tcgtgctgac cttaattttc atcaatcttt
     4261 ttgactacat gaggcggcgg ggaaaagaac ctacgacagc atcgaagttt tgtatggcaa
     4321 tgtttatatc tggcctatcc gcattagtca tggtttttgc agtgatgagt gtgccatccg
     4381 tttatcaata taaaacatca cccgcttggc tttggggtac atacggcgtt ttcacggtaa
     4441 gtgaaatctt tttaagccct attggactat cactcgtttc caaattggcg ccgccaaggt
     4501 taacggcctt aatgatgggc ggctggtttt tgtcaacttc actcggagga aagattgccg
     4561 gcgtcatgac aagtttctgg gatgacttca ctgataagaa aatatttttt ggagctttat
     4621 ttatcgcagc aactattggc ggaattctta tttacacgag gttgaaatcg ctcaacagta
     4681 ttgttagaga gaagacgggg tccgcttaag tcctctttaa agcgatgcag aacatcgctt
     4741 ttttcatttt aatctttaat tcaaacacat gccggaacta aaatcattca agccattcgt
     4801 tgcgcccgaa acccatatga aagaatttac agtgaaggct gtagtaatgg gttgtatcat
     4861 gggttgttta ttcggagcgg cgaatgttta tctcgcactg agagcaggtt taactgtcag
     4921 cgcatctatc ccgatagccg ttatcgccat cacggttgga agaagattac tgaagacaac
     4981 cattctggaa aataatatta ttcaaaccac gggttcggcg agtgaaagca ttgcttcggg
     5041 tgttgcattt acgttacccg gttttctatt tctttcaatg gtgaatgggc aaagtgttgg
     5101 agcaaatttt ttcaactacg ttacaattct cattcttgca atttttggcg gcctgttggg
     5161 aacattaatg atgatcccgc ttcgacgctc gctgatcgtg aaagaacatg gcactttacc
     5221 atatcccgaa ggaaccgcgt gcgctgcggt tttaaaagca ggagagaagg gtggtgatat
     5281 tgcacgcaca gcattcatcg gagtaggtgt tgccatgctg tatgctttcc tgcaaaggat
     5341 actgcacatc attgcagagg tgcccgaata cacaacaaaa ctcaccaata aatattttcc
     5401 ggcagctaag atcagcggag aaattacgcc cgaatatttg ggtgtcggct acataattgg
     5461 tccgcgtatt tcaggtgcgt tggttgcagg cggtgtcttg agttggcttg ttttaaatcc
     5521 tttgcttgca acacttatac aagatcaaac tttaatcgca tcgcaactcg tgaagcttgg
     5581 ctacttaaaa gacgtggcaa cagcgggcgg gccgggtgcg tgggacccgg caacccatca
     5641 atttgccgat accgcttccg ccatttatcg cgcatacatc aggcaagttg gagcaggtgc
     5701 tgtcgcggcg ggaggtttca ttacgctcat gaagactatt ccaaccatca tctcatcctt
     5761 caaagaaagt atcggctcga tcaggaatag aagcgaagga gataccaggt tgcgcactga
     5821 acgcgacctc agcttaaaag ttgttttatt cggaagcctt gcattggtta ttttgatggc
     5881 tttcattccc atgatacccg gtgattctat cggcagcaaa ttgttattgg gcgtgctcgt
     5941 cgtaattttt ggtgcattct tcgttaccgt ttcatcgcgc attgttggca ttattggttc
     6001 aagcaataat cccattagcg gaatgaccat tgcaactgta atgtcaacgt gtttggtatt
     6061 tatcggaatt ggatggagcg ggaaaacgta tgaacccatg gtgctggttg ttggcggcat
     6121 gatatgtatc gcggcggcga atgcaggcgc cacgtcgcag gatctgaaaa caggttttat
     6181 tgtgggatct actccgcgaa accaacagat cgctttattt attggagcga tcgtctcttc
     6241 actggttatt ggcttaacga tcaaagtgct tgacaaacca accgcagaaa tggtgcagca
     6301 gggctttacg catgcgatcg gcacagataa attcccgggt ccgcaggcaa ccctgatggc
     6361 gacactcatt aaaggaatat tatctttcaa ccttgactgg caatttgtat ttgtcggcgt
     6421 cgccctcgcc gttgtaatgg aattatgcgg cgtgaattct ttgagctttg ctgtaggagc
     6481 atatctgcca ttgagtacaa cgctgccaat tttctgtgga ggagtcattc gcggatttgt
     6541 cgactggcgc aaaaaacgcc gtggagaaat tgctgccgaa gacgatttgg gaaaaggtaa
     6601 tttatttgca acaggcctgg ttgctggcgg cgcgttggct ggtgtgatcg tcgctttgct
     6661 gatagcgggg agtgataata tcgcagctaa actcgaaaca ataaacctcg aaggcaaact
     6721 cgaagaagca atcggtattg gtggatacca gttgcttggt gtgatcggct ttgccgtgct
     6781 tggcatatta ctttacagga ccgcgatgaa aaagcacccg gaggtggaaa tttaaaatac
     6841 gctttctatt atttcaatat atcgatcgat caatattttc cagtcgtgct gcattgccca
     6901 tcgttttgca tttgctgaaa agaactcata atcagccaac actttttcaa ttgcctggct
     6961 tacctcccgt gggttttttg gatcgacaag aatacctgtt tcattatttc tgatcgcgtc
     7021 ttcaatacct gtattttttg aaccgatcgc cggaatacct aaggcgtttg cttcaaggat
     7081 cgctatacca aaaccttcca cgtcgcctga tgaagtattt gtactcagca ttagctttat
     7141 gtcaccatcg gccagtaatt gaattaattt ttctctgctt accgcaccat agaatttgat
     7201 gtgtgcttgt aaattttttt cgatggcaag ttgttgcagt tctttttgca gcaccggctg
     7261 tccaaccatg tgatagcata cgtgtggaaa gcgtcttatg atcgtcggta gcgcattgat
     7321 cacatttcgt tgcccttttc tttcggtgac gctgccgacg gttatgagtt gcaaattttc
     7381 cttgctggtt tttttgcgtg gccggacttg cgcatcagca aattcgtcga tgtcgatgcc
     7441 gtttgaaata acgcagattt ctatcgtggt ttttataaaa gacggaatga gcgacaaagt
     7501 aaaatttgaa acggcgataa tgcgatcaca ttttttaaga ttgaaattta tgaaccgttc
     7561 gcgcaactct gttccgtgga caatagcaat gattttcttc gatggataca acattcttag
     7621 catgctcgac aaccatagtg gaaattttcc tgacagaaat attacatcac tacgctttga
     7681 aagtgtgatc gctctttgta cccggttata ataagaggca agaacaatcc gcttccggta
     7741 taccggcgcg aaatttatct ttcgaaccca ttcggtattt tcaatttctt gtttggatgc
     7801 gtaaacaatg tcggcgacta ccgtcaccga aaaatttcgt tttgcaagat gaagggcaag
     7861 attaaaggca tggttaccga tgccgcccgc atcaggagga aattcagaag taatgatgag
     7921 aatttttgtc cgctcgctat caaacataac aagcttctaa agtaagaact tccgggcacg
     7981 gcacacaatg cttaatgctt cgtgtgattt gcgtaccaaa ttttcgcgta tttatctgta
     8041 agcaggaaat tctgaaatct tgtagcgagc gtatcctcgc cggcatcagt tgcatgaaga
     8101 ccgtcagttg tttcgctctc aagccatctg aaaccatcct ttcgtggttt agttgttcca
     8161 tttgcccatt gataccatcc ccatgtaacc agcggcgcga cagcgctgtc acctttatac
     8221 tgagtgcccg gcacaccatt gatctgatcc tggatcacaa atttttcacc ccagccgtta
     8281 tagtaagggc taggctccct gttcggaatt tcatacttgt gaaacgtggt ggttcttccc
     8341 tcgacgtaca ctaatctgat attaggaaac tttattttac atatccgcat gcatgcttca
     8401 atttcatttc taaccctgta agcgcggccc ggaaaaaaaa ccaggtttgt agaatcttct
     8461 gattccacat agatgatctg cacctgctca tgtgttattg agtgacccgc cagcacgttg
     8521 tccacatgac tccaataggg atcgtttgga ttcatcatgc tgttgaatga cgccgagctg
     8581 tagccattcg aacaactgaa tatatttagg aaagcgttcg tcgcaggatt gctgtcggtt
     8641 ttcgctttca gtgcattaat caaattacca ctcgtactcc ctcccaacga tatgaagaca
     8701 attgtcccgt tgctgctgga atcttttacg ccacttgcat taagcggcac aatggcacgt
     8761 gcaaattttt ttagatcttt tgcatattgg cctgaaggtg tgtcaacgcc accgggatat
     8821 aatccaccgg tgaagccaag ataagtcccc gttcccagat cattgatcgg aactttcgcg
     8881 gtgtcaataa gcgtcgcaga actattgttt gctgatccca ggcgtgaaac gtcactatca
     8941 agttttgtac aatccactaa taacatcaaa gcggtgacta aaacaaccca cattggtttc
     9001 atacgcctga tcaattaagg ttatcgaata aatgaaagta cacaaatagc gttttaggta
     9061 gcaaacagaa ttttcgtcgc gaatgtttga tattttttcg aggttccgac ggattccggt
     9121 cgcagaagat tttctgctat tttattgatg cgtgagctgc ttctcattgg tcgataaaat
     9181 attcgcccgg ctctttattt tatttgaaga aagtgcatga aaccgaaagg attgatgcct
     9241 ggttcttcca caggtagtga aattattatt gactcacgat tcacattacg gcttggtatg
     9301 gttcgcgtac caaacgttgg catatcggtc cgtcaacaaa aagttttgaa atcttgtagc
     9361 gagcgtgtcc tgccctgtag aatcggcgtg cattccgtct accgtcatgt cttttgtcca
     9421 tacaaaacca tccaatcgcg gtgtagttgt tccatctgcc cattggtacc acccccatgt
     9481 taccaacggg gctacggcgc tatcgccttt atagcgcgtc gcagctattc cattgatctg
     9541 atcctgaata tagaacttat agccccaacc gttataatat ggacacggct cctggttttg
     9601 gaccaggatc ttatcaaatg ttgtagttct tccaagtaca tacaccagtt ttaggtgctt
     9661 gaactttgat ttacatacct gcattgcctt gctaaaattg tcgcgaacaa tattggcccg
     9721 gtccgggaaa gagtttaccg gcagtgaatc atctgtttca aagtagatga cctgtacttg
     9781 tttgtatcca acgtgatggc tacgtagtat caaactcaca tggtcccagt attgatcgtt
     9841 cggattggca atgttgttaa gtgttgcagt gccggcgcca ttgttgcagt tcagtaaaaa
     9901 cagaaatgga ttcgttttcg ggttacccgc cgtttttagg atcagggctt tcatgttgtt
     9961 gccgcccgta ctcgctccca gggaaatgaa caacactttg ccggtatcag atgctttgcc
    10021 gctgctatca agtggtttta tcttcgtcgc aaaccgaagc agatctttcg cgtattgtcc
    10081 ggacggagtg tcaattcccg ctggatataa tccgccggta tatccaagat acgtgccggt
    10141 ggctaggtca ttgatgggaa tttttatcgt gtcggtgaag gctactgaat ttgcggcaga
    10201 cattcccgac ggatggttta cttcgctggt tttctgacat gcggcgaata cgaccaacca
    10261 cacgatcact cgaaatgcgg atgttttcat gtttatccaa aggttttgcg ttgcctaacg
    10321 agtggttaat ttcgcacggc cgcgtgtagt atcactttta aataaaccgg gttgccaccg
    10381 cccgatttag tgttttttat accagatatt tgcaatcttg tcggtgatca ggaaattttg
    10441 aaaccgggta gaaagtgagt cctgcccttc aggagtggca tgaacgccat cataggacaa
    10501 gctctcatca aatacaaaac cgtcggttgt acgcggtacc gttgagccgt tcgtccattg
    10561 ataaaatgcc cacgtaacca ttggagctac cgcattagtc cctttgtact cagtacccgg
    10621 cacgccattg atctggtctt caatcatgaa tttgtcgccc catccgttat aataagggca
    10681 aggttctgaa ttcgtggttt tagttgtacc aaacgttgtc gttcttccga gcacatagac
    10741 gagtttcaga ttaggcaact ttaccttaca tgtgcggata gccgcctcca gatccacctt
    10801 atactggttg ggtcgtgcag gaaaatccaa tattgtactg agagagtctt ccgattcaag
    10861 gtagacaacc tgcacctgtt taagcgttga atgagccccc agaattacct ggctgacgtg
    10921 agtccaatag tcagtgttcg gggctgcgat ctgttgtaac gaggcatcgc cgccaccatt
    10981 gcaggcgttg atcaatttta agtaaggatt tttcttcgca taacgaagcg tttttgcttt
    11041 caacgaatcc atgttacgtc ccccggtgct gccacccatg gatataaaaa ggatcttacc
    11101 gacagttgag tccacgatgc cggaaccact aagcggttta atagccacag cgaatgcttt
    11161 taaatccttc ttatattggc cgcttggact atttacgcct cccgggtaca acccgcccgt
    11221 ataaccaaaa tatgttccgg tgccaaggtc aatcaaaggc acttttacag tatcagtcaa
    11281 ggcaacagcg ttgttcttcg tgtcgtcaga gctaactgta ttcatttgat ctttgttgca
    11341 agataaaaac gcgaggaaca gggatgcggc agaaacgata tatcttttca tattgttttg
    11401 ttttgaataa gtacaagtta tggtgacgcg atctttttag cgattacaat taaactttct
    11461 caaagagatc tctcgtcatt ttgttatgtt aatacggaat taaaccctct gggaacaaac
    11521 ttaacccact attttctttt cttcttgtac catattttag cataggtgtc tgtcatcagg
    11581 aatgtcttga agcgatgaac gagtgtatcc tcacccgcat cggtagcgtg aaggccatct
    11641 ttcgtatcgc tcgcctgcca tgtaaatcca tcctgcctcg gaacgtttgt tccattggcc
    11701 cattcatacc aaccccacgt cattatggga gccacaggat tacttccttt gtattctgta
    11761 cccggcgctc cgttaatctg gtcctcaatg gcaaacttac aagcccatcc attgtaataa
    11821 agacagggtt ctttgttggt ggtctgagta agattatttg tcgaatcggg gaatgtggtt
    11881 gttctgccca ggaagtagac taatttcaaa ttcggatact tgagtttaca tgttcgcaca
    11941 gccgcttcaa tattaccttt aacagcgttc ggccggttag gaaacgttgt cacctgtata
    12001 gaatcctctg tttccatata gatcacttga acttgtttcg gatatgcgcg actcgttatt
    12061 atcacgttag aaacatgatc ccagtacgaa tcgtttggat tgcttatgct ttcgaatgac
    12121 gcggtgccgc tgccgtcgga acaattgatc aacttcaaaa aaggattggt gttaacatca
    12181 ttaattgtag aatcctttaa aacgcgcatc aagtgtccgc tggtactgcc gcctaaggaa
    12241 ataaatacga ttttaccgac ggccgaatct accgcgccac ttccgttcag cggtttaatg
    12301 gcgctggcaa aggttttcag atccttttta tattgaaggg tcggataatt cagtccaccg
    12361 ggatataatc cggccgtaaa tccaaaataa gttcccgttc ccagatcatt aatcgggacc
    12421 atcactgtgt ccgtaaatac agtagcgcta ttattgacag ctccgcttct tattgcgttg
    12481 ctgtcttgtt tgctacaagc cgaaaataca agaataacaa gtaaaaggaa tttgtttgtc
    12541 ttcatacaaa aaagagattt tgatgggaaa aatgttgtga tgatttatat ctgtcagcag
    12601 tttattactt cgtttctttt ttacttcaga gaacggatac ctgccggtga aggaaggccg
    12661 ggaattgata acagcgcttt gtccatagat gtcaaaaaag ttttcgttaa aaggatttaa
    12721 agtttatcta attgtagccg cgtatgatag cggcttgaga ataaaattag caaatgtaga
    12781 taatatgcaa aaacattctt tgaaattata ctaacagccc gggagcaatc tatgtaaaga
    12841 ttactatagt tttggataaa taacaaccgg ctgcaaattt ttcctggttc acagaaaaat
    12901 agaaaaaatg gatgtatatt cctatcgcta cctgctggat ggaattttat tgctgctaat
    12961 tgttattaag acggttcatt ttctaaaaaa caaaaattat aactggaagg gttatcactg
    13021 gatctatttc agcgagtaca a
//
LOCUS       DASQJI010000580         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1608556,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000580 DASQJI010000000
VERSION     DASQJI010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1608556"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VEV83_15810"
     CDS             complement(<1..717)
                     /locus_tag="VEV83_15810"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK46643.1"
                     /translation="MKHKIVLICAVVVGAIQQTTAQNFDTVQIKTVKITETISMLQGS
                     GGNIGVLTGKDGIVIIDDQFAPLSEKIKAALKTLSDKPVRFVINTHFHGDHVGGNENF
                     GGEGAIIVAQDNTRLRMTSDQFSKAMNFEQKAAPYDALPKVTFADSVTLHLNGETAQV
                     IHVKNAHTDGDAFIYFKESNVIHAGDVFVRYGLPFIDQEHGGSINGMIEGVDKLLSIT
                     NENSKIIPGHGDLATKKDVMQ"
     gene            complement(764..>1517)
                     /locus_tag="VEV83_15815"
     CDS             complement(764..>1517)
                     /locus_tag="VEV83_15815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK46644.1"
                     /translation="YWVMKPVNYQAGKKYPLLLEIHGGPSSMWGPGEFTMWHEFQFFC
                     ARGYGVVYSNPRGSGGYGVDFLRANMNDWGDGPTSDVLTALDKTVVEGWADTSKLLIT
                     GGSYAGYLVSWIIGHDHRFKAACSQRGVYDLSTFFGEGNAWRLIPLWFGGYPWEQKVK
                     EMLDKESPISYVQNITTPYIIFHGENDLRTGITQSEMLFRSLKVLDRPVEYVRHPGAT
                     HEITRSGNNRQRIDQMLRTYEFFERFISTTNN"
BASE COUNT          385 a          387 c          301 g          444 t
ORIGIN      
        1 ctgcatcaca tctttttttg ttgcaaggtc tccatgaccg gggatgatct tcgaattttc
       61 atttgtgatc gataatagtt tgtcaacgcc ttctatcatc ccgttgatac ttccaccgtg
      121 ttcctggtca atgaacggaa gaccgtacct gacgaaaacg tcgcccgcat gtataacatt
      181 tgattcttta aagtagatga atgcatcgcc atcagtatgt gcgtttttca catgaataac
      241 ctgtgccgtt tcgccattca aatgaagagt gaccgagtct gcaaaagtta cttttggcag
      301 cgcatcataa ggagctgctt tttgttcaaa gttcatcgcc tttgaaaact ggtcgcttgt
      361 cattcgaagc cgcgtgttgt cctgtgccac gatgatggcg ccctctcctc caaaattttc
      421 atttccgccc acgtgatcac cgtgaaaatg cgtattgatc acgaacctta ccggtttgtc
      481 gctcagcgtt tttaaagcag cttttatttt ttctgataat ggagcaaact ggtcatcgat
      541 gatcacaatg ccatccttcc ccgtcaacac gccaatattt ccaccagaac cctgcagcat
      601 cgaaattgtt tcggtgatct tgaccgtttt gatttgcact gtatcaaaat tttgtgcggt
      661 tgtttgctgg attgcgccga ccaccactgc gcaaatgaga acgatcttat gcttcataaa
      721 aactgtttta cagtgaagag aagttagagc gacgatattt tgtttaatta ttagttgttg
      781 aaataaatct ttcaaaaaat tcatacgtcc tcagcatttg atcaatgcgc tgacgattgt
      841 tgccacttct tgtgatctca tgcgtcgctc ccgggtggcg aacatattcc actggcctgt
      901 ccagcacttt caaacttctg aacagcatct cactttgtgt aataccggtt cgcagatcat
      961 tctctccatg aaaaatgata taaggcgttg tgatgttttg tacgtagctg attggggatt
     1021 ccttgtcgag catctccttt actttttgtt cccacgggta tccgccgaac caaagcggta
     1081 tgaggcgcca tgcatttcct tcgccaaaaa atgtactcag atcgtacacg ccacgctgag
     1141 aacacgctgc cttaaaacga tgatcgtgac ctattatcca cgaaacaaga taacccgcgt
     1201 aagacccgcc ggtgatgagc aacttacttg tgtcagccca gccttcaaca acagttttat
     1261 ccaacgctgt taacacgtca ctcgtaggcc catcgcccca atcgttcatg tttgctctta
     1321 agaagtcgac accataacca cccgagccgc gagggttgct gtatacgaca ccataacctc
     1381 tcgcacagaa aaattgaaac tcatgccaca tggtgaattc gcccgggccc cacatcgacg
     1441 aagggcctcc atgtatctcc aacaacaaag gatatttttt tccggcctga taattaaccg
     1501 gcttcatcac ccaatat
//
LOCUS       DASQJI010000581         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1608595,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000581 DASQJI010000000
VERSION     DASQJI010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1608595"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VEV83_15820"
     CDS             <1..921
                     /locus_tag="VEV83_15820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HYK46645.1"
                     /translation="CAVPAIMTTRNIENRKERLLTILVTPLMSCSARLPVYTILIALV
                     IPNKYYLGFLSLQGLVMMALYLLGLVMALVVSTVFKYIIKLKEKSYFILELPVYRAPR
                     WKNVGITMVEKARIFITDAGRVILFISLLLWFLSSFGPPSRMQAVHKKYDALVAQGSA
                     SAESKSIQKQYKSEKLQNSFAGILGQTIEPVIKPLGYDWKIGIALITSFAAREVFVGT
                     MATLYSVEDKDNKTLHQKMEAAVHEDGSKVYTLPAALSLMVFYVFAMQCMSTLAVVKR
                     ETRTWKWPVIQFVYMTALAYLMSLLVYNIF"
     gene            1049..1477
                     /locus_tag="VEV83_15825"
     CDS             1049..1477
                     /locus_tag="VEV83_15825"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK46646.1"
                     /translation="MNNELKYIVHGCLLVIVFLIAGFVVKFCFTYEQESQNSVSNPIV
                     HNDSAENVSASKGRTLFITNCASCHAINKRLIGPALVGINERVTDKKLLYDWIRNNKK
                     VLKSGNDYFNALYNEYGQVSMNAFPNLSDDDIDAILAYID"
     gene            1600..2079
                     /locus_tag="VEV83_15830"
     CDS             1600..2079
                     /locus_tag="VEV83_15830"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK46647.1"
                     /translation="MKQEKWFNRKFDFSTQENIFPSIIERLAGTPARFEEKFRSIPPD
                     IQSVRLNGSWTIKENLGHLIDLEPLWQGRFDDIMNGEREMRPTDLQNRKTSEANHDAV
                     PIEELLRGFRDIRTKTMKLIQELTDEQVFKTSIHPRLKTPMRVMDLFFLWPNTTIII"
     gene            2138..>2348
                     /locus_tag="VEV83_15835"
     CDS             2138..>2348
                     /locus_tag="VEV83_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46648.1"
                     /translation="MTRKQFTFLTFLHIAIGSFAQSSTVKENNLINNPGVAIAPLRFL
                     ASDELMGRDPFRPEINIAARYISEQF"
BASE COUNT          677 a          497 c          541 g          633 t
ORIGIN      
        1 tgcgcagtac ctgcgatcat gacgacacga aacattgaaa acaggaagga aaggttactt
       61 acgatcctcg tgaccccgtt gatgagttgc agtgcccgct tgcccgtgta cacgattttg
      121 atcgctctcg ttataccgaa caaatattat ttggggtttc ttagtttgca agggctggtt
      181 atgatggcgc tttatttact tggcctggtg atggccctcg ttgtgagcac ggtgttcaaa
      241 tatattatta agcttaagga gaaaagttat ttcatccttg agctgcccgt gtaccgcgca
      301 ccacgctgga aaaatgtggg aataacgatg gttgaaaaag cgaggatctt tatcaccgat
      361 gcgggaagag tgatactttt catcagcctg ctgctttggt tcttaagcag ctttgggccg
      421 ccatccagga tgcaggccgt gcataagaaa tacgacgcgc tcgtggccca gggatctgcg
      481 tcagcggaat ccaagtcgat acaaaaacaa tataaatccg aaaagctgca aaactctttc
      541 gcagggatct taggacagac gatcgaaccg gtgatcaaac ctttaggcta cgactggaag
      601 atcggtatcg cgctcattac gtcttttgct gcccgcgaag tttttgtagg aacaatggcc
      661 accttataca gtgtagaaga caaggacaac aaaacgctcc atcaaaaaat ggaagcagcc
      721 gtgcatgaag atggcagcaa agtatacaca cttcctgcag cattatcgct catggttttt
      781 tatgtatttg cgatgcaatg catgagcacg cttgcggttg taaaaagaga aaccaggacg
      841 tggaagtggc cggtcatcca gtttgtgtat atgacggccc tggcctatct gatgagttta
      901 ttagtgtata atattttttg attcttctcc accgacgtag tgaagcaaat gcccgcgttc
      961 atgtgattgt cgcaatgctg agatattttc catacagaat agttgacgaa aaatattgtg
     1021 tactaccttt gctttaagcc gttctaaaat gaacaacgag cttaagtata ttgttcatgg
     1081 atgccttctg gtgattgtgt ttcttattgc cggcttcgtt gtaaagtttt gcttcacata
     1141 tgaacaagaa tctcaaaatt ctgtttcaaa cccgatagtt cataatgact cagcggagaa
     1201 tgtttcggca tcgaagggca gaactttatt cataacaaac tgcgcgtcat gtcacgctat
     1261 caacaaacga ttgatcggtc cggcgctggt gggtatcaat gaacgggtaa ccgacaagaa
     1321 actgttatac gactggataa gaaataataa aaaagttctc aagtcgggga atgattactt
     1381 caatgcgctc tataacgaat acggccaggt ttctatgaac gcatttccga atctcagcga
     1441 tgatgatatc gatgctatcc tcgcctatat agactgaaat taatcatgga ttgctgctgc
     1501 tttcggcggc gtcgcccggt attttagtca aacctttaac ttcgctgccc gtagcatctg
     1561 cagttttgta atacacttgt gcacttttaa ttgcggctga tgaagcagga aaaatggttc
     1621 aaccgaaaat ttgatttcag cacacaagaa aatatttttc catccatcat agagcggctt
     1681 gccggtacgc ctgcacgctt cgaagaaaag tttagatcaa ttccgcccga tattcaatcg
     1741 gtgaggttaa acggaagttg gacgattaag gaaaatcttg gtcacctgat cgacctggag
     1801 ccactttggc aaggccggtt tgatgacatc atgaatggtg agcgggaaat gagaccaacg
     1861 gatctgcaaa acaggaaaac gagcgaggca aatcacgatg cagtgccaat agaagagctg
     1921 ttacggggat ttcgtgacat ccgaacaaaa acaatgaaac ttattcaaga gcttaccgat
     1981 gaacaagtgt tcaaaacgtc gattcatccg agattgaaaa cgcctatgcg agtaatggac
     2041 ctgttttttt tgtggccgaa cacgacgatc atcatttagc gaggattact gaaatcgccc
     2101 gaattttaaa atgataaaag cgaacaatca aaaatttatg acacgaaagc aatttacatt
     2161 cttaaccttt ttgcacatag ctatcggctc ttttgctcaa tcatcgacgg ttaaagaaaa
     2221 caacctgatc aacaatcccg gtgtggccat tgcgccgcta aggtttcttg catcagatga
     2281 gttaatgggt cgcgatcctt ttcggccgga gatcaacata gccgcccggt acatcagtga
     2341 acaattcc
//
LOCUS       DASQJI010000582         3747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_228019,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000582 DASQJI010000000
VERSION     DASQJI010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228019"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VEV83_15840"
     CDS             complement(<1..342)
                     /locus_tag="VEV83_15840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK46649.1"
                     /translation="MYSLKMLLSFTAILFCCLAAESQSSFNTKLQAADSFYFANDWNN
                     AVNLYNELLTDTSTNSLALQRLGFAYYNIGNIDEALRNFHRSETANPPAAMQPYLYSR
                     MAKAFSIKNDYE"
     gene            complement(479..1405)
                     /locus_tag="VEV83_15845"
     CDS             complement(479..1405)
                     /locus_tag="VEV83_15845"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK46650.1"
                     /translation="MQDDLTIMRSFPNFHGSSFDLNQYNKTFEEKNVIIHASSKHVEY
                     GEHWGPLSMKCVIKGVEHYECNGRFYNVDKDSYLILNDGQYYSSYIYSDSTAESFTIN
                     FAAAFVQRSLRAADFEERQEPKSFEFIEKLYAHDGIAMPLLTSLYWQAAAEIPDTELI
                     NETYHTLFSYLLLQQEQLKGEIRRIKARKYSTQVELYKRLNYAKDFIHSCYMDEITLD
                     KLASVACLNSVYFLREFKKYFTVTPHQYVMKRRLEAAKKLLETTTFSIADICYAVGYR
                     DVTSFNKLFRKNFLLAPGAYRSSVELSCKHNC"
     gene            1875..2444
                     /locus_tag="VEV83_15850"
     CDS             1875..2444
                     /locus_tag="VEV83_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46651.1"
                     /translation="MTNKVAIFLLVWLPAHSCTQNVQLDKIKAYLNASTVEEKSKYTS
                     DNFRSYFINKEDGGKNKTEALASFQNWDGPMHPDIKILSYTFHDSIWTVTFNEQNDFT
                     KPIGYPGWKGTATFVFDSKGLIRETTYVPDSANLPYKPYLKPAVDWLKVNMPQELDEV
                     YQNGKLVQNAEAANKWRMLLSKWQSQKNN"
     gene            2450..3484
                     /locus_tag="VEV83_15855"
     CDS             2450..3484
                     /locus_tag="VEV83_15855"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK46652.1"
                     /translation="MKIGQIINRKIRMLSVCVVLTVPLLSQLQTAAKFDVAKPPYGIL
                     VDAGGHKLHLSVQGNGSPTVIFENGTADFSFIWSLVQPDVAKFTRTVSYDRAGYAWSD
                     PGPTPRTSKQICYELHTALQHAGINPPYILVGQSFGGFLVRAFARYYPGEVVGVVLVE
                     AVQEDQRIFMGGDTPMLIRSFARGRTVPDVQTVFTIPHDTSEPITSNTEIDPLFNKFP
                     DSIQKMQVWAQSQPWLIPSVQAEMDWSPEDVADLYAHRNDPAYMLGDMPLIVLTRGEG
                     GFDGRSDSLQLENERLHAQHELTHLSTNSKQIIDMHSGHNIHVEDPAVVTAAINEVFT
                     AATTNTTLKQ"
BASE COUNT         1064 a          825 c          839 g         1019 t
ORIGIN      
        1 ttcgtaatca ttttttatgc tgaatgcttt cgccattcgt gaatagaggt acggttgcat
       61 ggcagccgga gggttagcag tttccgacct gtgaaagttt ctgagcgcct catcgatgtt
      121 gccaatattg taatacgcaa agccgagccg ctgcagcgcg aggctgttcg ttgatgtatc
      181 tgtcaatagt tcgttgtaaa gattgactgc gttattccaa tcatttgcaa aatagaatga
      241 gtctgcggcc tggagctttg tgttgaatga actctggctt tcagcagcca ggcagcaaaa
      301 caaaatagca gtaaagctta gcagcatttt taaagagtac ataagcgaat ttttctgtta
      361 gaaaatcggc tcaagtttat gcggaacaca ggaaagtaaa caggtgaaaa ttgacttttt
      421 ggtgcccgaa gaattgattc gcacccgata acggaaacag ccggggaagc agacgagctc
      481 agcagttatg tttgcaggaa agttcaacag aggaccggta tgcaccgggc gccagcagga
      541 aattcttcct gaataatttg ttgaaagaag ttacgtcgcg gtagccaacc gcataacaga
      601 tgtcagcaat actgaacgtt gtggtttcga gtaatttctt agctgcctcc agccggcgct
      661 tcatgacgta ttggtgtgga gttaccgtaa aatatttttt aaactcacgc aaaaaataca
      721 cgctgttcag gcatgcgacg gaggcaagtt tatcaagcgt tatttcatcc atataacatg
      781 agtggataaa gtcttttgcg taattaagtc gcttgtacaa ttcgacctgc gtcgagtatt
      841 tcctggcttt tatccgtctt atttctcctt tcagttgttc ctgctgaagc aacaaatatg
      901 aaaataaagt gtggtatgtc tcgtttatca attccgtatc cgggatttca gctgcggctt
      961 gccaatataa acttgtcaat aaaggcatcg ctatgccatc gtgagcgtat aacttctcaa
     1021 tgaattcaaa acttttcggt tcttgtcgtt cttcgaaatc cgcggccctt aatgaccgtt
     1081 gaacaaacgc tgctgcaaag ttgatcgtaa aggactcggc tgttgaatcg gaataaatat
     1141 agcttgaata atactggcca tcatttaaga tcaaatagct gtctttatcc acattgtaaa
     1201 acctgccatt gcactcatag tgctcaacac ctttgatgac gcatttcatt gaaagcggtc
     1261 cccaatgttc accatactca acatgttttg acgacgcatg tataatgaca ttcttttcct
     1321 caaacgtctt gttgtattga ttgaggtcaa aagatgatcc atgaaagttg gggaagcttc
     1381 tcattatggt aagatcatct tgcatcaaag tattttgcac ataaattaag cagaagctgc
     1441 cacctggttc aaagaaagtt atcaacggtt gaagatcttt taggaaggcg ggtgatcgga
     1501 gatagtaaat ggggcaatga ttgatccagg accgcagatg cgcgatcata tcattctgcg
     1561 ttttagtcat cgtcaccttc gcgcattacg gcacgaaatc gtctttgttc ttgcggtaaa
     1621 acgcttcaaa aattaattga gctctggccc gtcattcccg cgaaagcgga aacctgctcc
     1681 cgggtttgca agttgattga tgtaagatga gatgccggat caaatgtctg catttactag
     1741 tggtcgcatc cgggtacgct cacgctgatg attttagcat taaaccgcaa aaaatcaatt
     1801 ctcaccaata aaaaagtttt caatcctcat accttgtaga atccataaat tcccacagta
     1861 gtagctattc agatatgaca aataaagttg caatctttct tcttgtgtgg cttccggctc
     1921 attcatgcac tcagaatgtg cagttggata agataaaagc atatctgaat gcatccactg
     1981 tggaggaaaa atccaagtat acgtcagata attttcgttc ttacttcata aacaaagaag
     2041 atggcggaaa aaacaagacc gaagcattgg cgtcatttca aaactgggac ggacctatgc
     2101 atccggatat aaagatatta agctacactt ttcatgacag catttggacc gttactttca
     2161 acgagcaaaa tgattttact aaacccatcg gctaccccgg ctggaaagga acggcaacat
     2221 ttgtttttga ctcgaaaggt ttgatccggg aaacaactta tgttcctgat tctgcgaacc
     2281 tgccttataa accgtacctc aaacccgccg ttgactggct taaagtaaat atgccccagg
     2341 aattagacga ggtttatcaa aacggcaagc tcgtgcaaaa cgccgaagcg gcgaataaat
     2401 ggcgcatgct gttaagcaaa tggcaatcgc aaaaaaacaa ttagcgttta tgaagatcgg
     2461 tcaaattata aatcggaaaa ttcgcatgct ttcggtctgc gtcgtgttaa cggttcctct
     2521 tttatcgcaa ttacaaaccg cagccaaatt tgatgttgcc aaacctccgt atggcatact
     2581 tgtcgacgcg ggtggccata aacttcattt gagtgtgcag ggaaacggct cgccgacggt
     2641 aatatttgaa aatggcaccg ccgacttctc ttttatctgg tcgctcgtac aaccggacgt
     2701 cgcaaagttt acacgcacgg tttcatacga cagggcgggt tatgcgtgga gcgatccggg
     2761 accgacgcca aggacaagca aacaaatttg ttacgagttg cacacggcac tccaacacgc
     2821 cggcataaat ccgccgtata tcctcgtggg acaatcattc ggtggctttc ttgtgcgtgc
     2881 gtttgcgcga tattatccag gcgaagtggt aggtgtagtt ctggtagagg ctgtccagga
     2941 ggatcaacgc atttttatgg gcggcgacac gccgatgctc attcgcagtt tcgcgagggg
     3001 aagaacggtg ccggatgtgc agactgtttt caccattccg catgatacca gcgaaccaat
     3061 aacatcgaac acagaaattg atccgctgtt caataaattt ccagacagca tccaaaaaat
     3121 gcaggtgtgg gcgcaatcac aaccatggct tataccgtct gtgcaagcgg agatggattg
     3181 gtcgccagaa gatgttgccg atctctatgc acacaggaat gatcctgctt atatgctcgg
     3241 tgatatgccg ctgatcgtgt taacgcgtgg cgaaggagga ttcgatggca ggtccgattc
     3301 tttgcaactg gaaaatgaaa ggctccatgc acagcatgaa ctaacacacc tgtccaccaa
     3361 cagtaagcaa attattgaca tgcacagcgg ccacaacatt catgtggaag atccggcggt
     3421 ggtgaccgct gcaatcaatg aagtttttac ggctgcgaca acgaacacga cgttgaagca
     3481 atgagcctct cctaattttt tccttcccct ggaaggaatc tgcattttag tgcgtcaaac
     3541 atctctcgtt aaagggaatc atacctacct taaagtcctc aaacctattt ctgcgcatat
     3601 acggtaacaa tggcctttgt ctatttgcag tatcaacttg catcacgagt tgaacgatcc
     3661 agcaaaaaaa ttctctttct ctaacataaa caggttaagt ttggcgccac atcggctcct
     3721 taaccacaac gactgcatca atgttat
//
LOCUS       DASQJI010000583         9736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_687246,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000583 DASQJI010000000
VERSION     DASQJI010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9736
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687246"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(307..1581)
                     /locus_tag="VEV83_15860"
     CDS             complement(307..1581)
                     /locus_tag="VEV83_15860"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HYK46653.1"
                     /translation="MKIKRRQFINLSAATAAGVATSISSLVNATPKKTVGATYDLQIM
                     NSNVTPITVEERAARIKKAQMLMHDQKIEAILLDAGTAMQYFTGISWWQSERPLVAII
                     PASGEPKYVCPAFEESRFRELISIGKDVYVWQEDESPYKRVVVALNDAGIHAGDIGIE
                     ERLRFFILDGVRQEAANLNYVSANPITIPCRMIKSDAEIALMQNASDITVAAIKFGII
                     QLHESMTQNELSNIISGEQEKLGGESPFALVLFGQSSAFPHGSIKPQTLKKGDIVLMD
                     CGCAVEGYNSDITRTVVFGEPTNRQIQVWNLEKQAQAAAFSAAKIGAHCEEVDAAARK
                     VITDAGFGPGYKLPGLPHRTGHGIGMDGHEWGNIVKGNQQLLQAGMCFSIEPTISIPG
                     EFGVRLEDCVYMTSQGPKWFSQTSKSITEPFG"
     gene            1821..2150
                     /locus_tag="VEV83_15865"
     CDS             1821..2150
                     /locus_tag="VEV83_15865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46654.1"
                     /translation="MKRTFVITGFSRYTYPALIEKSRQIVSSLNGDECFADLSPMVDT
                     VKIAIDEFENTLQQPGNNEAMMKQQHYRFSLILLLNDLATCVQNSSNNDVTLMQRSGY
                     NYIVNEA"
     gene            2370..5723
                     /locus_tag="VEV83_15870"
     CDS             2370..5723
                     /locus_tag="VEV83_15870"
                     /inference="COORDINATES: protein motif:HMM:TIGR03491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM0106 family RecB-like putative nuclease"
                     /protein_id="HYK46655.1"
                     /translation="MKITQGIIYLSASDLSAHISCKHVTWLNLQLAQKKIPPPPVYEN
                     PSLEALQTRGEEFEKKYIEKLKQGGKSIAEIFKGNTEKALEETVQAMRDGVDVIYQAR
                     LEQETWHGWADFLIKADKPGKFGDWSYEVMDTKLSKETKAGAILQISLYSEMLAQLQG
                     CKPEYMYINNPTGIHAYRVDDFGAYYRLVKKKLLQTIDQPDETYPDPVPHCDICRWWQ
                     LCNQRRRDDDHLSFVAGMGKKQIKQANKWNVNTLEQLADLEVPLKYVAETGSIETYEK
                     LVYQSKLQLTARVTRKPAYEILELEEGFGFYQLPEPSPHDMFFDFEGDPFVAETGLEY
                     LFGWIYHDEYHDLWATHDLEEKKALEIFMDEVMRIRQLDQNMHIYHFGAYEPAALKRL
                     VGKYATKEEQLDTLLRSGAFVNLHTITRHALRAGVESYSLKDLEIFHRYKRVKDLREV
                     SKKKMLYEGLLESGYANAIDDETRAVVRDYNKDDCLSTQSLRNWLEQLRTKLINEGKE
                     IRRPVSEEGKPGENVTEHQQKIKPLFDVLMQDIPFERKERSTEQEAKWLLANMLDWYR
                     REKKSFWWEFFRLSELPDEDLITEQTPLAGLVFTGREERVKKSVVHYYQFPQQEFDLD
                     EGDKVAFKTKTIGEIYSIDELRRVIGIKKSRDSIEAHPTNVVAKDDIPDKPKEEAIIR
                     LAQYVVTSGLTGEGKFKAGRDLLLRHVRLPIDPSQITDKTKRAIVQVMNLDNSVLPIQ
                     GPPGTGKSHTAACMIIALMKAGKKIGVSALSHKVINGLLNKVTEMALREKMNIDIIQK
                     VREDSKDNKPAWNESTDNDEVADAIRKRCQVAAGTSFMWAREQFFESVDYLFVDEAGQ
                     LSLIDTIALAHAGKNLVLMGDPQQLKQPQKGSHPEGTEVSALEHVLQGEKTISNEQGL
                     FLETTWRMHPGINDYISELFYDGRLHPKDETRNQTLEGITPYQKPGLYLEITDHEGNQ
                     NSSAEEVEKIVSIVNALTCGAVYWVDCDRKKNVLQPGHIKIISPYNAQVELLQSALPG
                     MQIGTVDKFQGQEAPVIIFSMATSTPEDAPRGMEFLYSLNRLNVAVSRARAVFILVAN
                     SSLFEPLCKSPHQMQLANALCRLKEMAVN"
     gene            5958..6200
                     /locus_tag="VEV83_15875"
     CDS             5958..6200
                     /locus_tag="VEV83_15875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46656.1"
                     /translation="MQTRSNNTIVAMPDNSHMEVTYYCMDSLLTKQEKQHHVRLFIQL
                     HDSFCTLKIEKAYCSNQSQLESIVHNKVINTKGFIC"
     gene            6597..>9736
                     /locus_tag="VEV83_15880"
     CDS             6597..>9736
                     /locus_tag="VEV83_15880"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HYK46657.1"
                     /translation="MMDLDTVFENKRLKIAWLLLISFIPVFLKAQTLKTTDLVLYGKR
                     VQIGSSSNIVDGSVGALSYIQTNGTVSFGGSLYSDSAIILNNNNTVNGVVKANNSRAS
                     SVTFGTPVSVGSSANLKDSVIANGNIRIGGGYVKQVSQPSGTTYSGPAPALGRSVGGL
                     LALPVFPAMPATIPIGSVGSTNINQSTTITPGKYGNVSLSGGQTITLAGAGIYIFNSI
                     KNSGSFNTFVFDFQNVAGNFTVLVLGDIDLNKNFVNIINGGAANYIFLEGLGNGATSS
                     GNAFNLANGSSGGRNSEWKGTVWIPNGNISIGTGSKAVNITGALFSNNTINISSNVTM
                     AHAGYVDLQNGDNPLIIPSYPPPPGGKVNNVIGSQLTSLFQNWDGTTTFEDSVYRVID
                     SKVLIDVIVTKGQYDYILNLLQSPGYGMTGIIDNGNNAVITGFFPIVNLDKLNALGLY
                     INHCRPVFPPVKNSGVTNTNGDISQKSDVARNGYNVFGENVTVGVLSDSYNNQGLAPA
                     DVVNDDLPGNPINPDAVNVMEDYPFTVFSRASDEGRAMLQNVHDVAPKSKLAFRTGFI
                     SEGDFALGVRQMVDDAACDVIIDDITYITSPFFRDGFVAQSANYAHDHGKTYISAAGN
                     YGAKSYSANFNPVPAPGGLTGYAHNFNTSGGSDILQQISLVPGIYTVVLQWDNDFYSL
                     GGANPTPVDLDFYLVNNAGATLFGMNSNNFHRDPIEVLSFEVLGNTTTNIMVTSSNVS
                     TNVRFKYIIFRGGAQFLEYNSGNSTIVGQANADGALAVGAVRYTQTPIYGVTPPQIEY
                     FSSLGGTPVNGVLRNKPDFAAPDGGNTTVDLGSTLNLEVGESPVFPNFFGTSAAAPHA
                     GGVAALLIAGSQKFRGTAIAPAEIKSILQSTAIDMVTPGFDNVSGAGFIQADLAMHTF
                     GSPTPTLSYLTLPAGITAATPTTFTLTLTGDFFSPNSVVYLRDQPLVTTIISPTQATA
                     IVPGFTGNPLIRMYTPPVSATLLDGGFSNGINILSIRKKKVYVIADNKSKLYGEVMPQ
                     FTAHVLIDSIPLGNTTL"
BASE COUNT         2794 a         2155 c         2233 g         2554 t
ORIGIN      
        1 gttttattcg aattcatcat tcatggctta tcaacaaaac tcatgtgaaa cagtatgtaa
       61 aaggagaggg cggccaggtg atcatgaatg acggaacggc gctcgatgta agccgcagaa
      121 aaaaagaata cgttatcgag cgattgaaga attaatttgt ttcagtatgc atcacaagtt
      181 gtttggcacc aactgtgaaa gggtcgcatt tttttatatc tcttctctat cttgtgcggc
      241 tcataatatc tgtcggataa atctcatgcg atcttaaaaa attttgtcgg ctgtttttcg
      301 cgaagatcat ccgaacggtt ccgttatcga cttgctcgtt tgagaaaacc atttcggtcc
      361 ttgagacgtc atataaacac aatcctcgag tcgcacaccg aattcgccgg gaatagaaat
      421 ggtcggctca atgctaaagc acatacctgc ctgcagtagt tgctggttgc cttttacgat
      481 gtttccccat tcatggccat ccataccaat gccatggcct gttcgatgcg gcagccccgg
      541 taatttgtag ccgggcccaa aacctgcatc cgttatcacc tttcgcgcag ccgcatcaac
      601 ttcttcgcag tgcgcgccaa tttttgctgc actgaatgcg gcagcttgag cctgtttttc
      661 aagattccaa acctggattt gccggttggt cggctcgcca aataccaccg ttcttgtaat
      721 atccgaattg taaccttcga cggcgcatcc gcaatccatc agaacaatgt cacctttctt
      781 taaggtttgc ggtttgatac tgccgtgcgg aaacgcagat gactgcccaa agagcacaag
      841 cgcaaaaggc gattcgccgc caagtttttc ttgttctccg ctgatgatat tcgacagctc
      901 attttgcgtc atgctttcat gcagttgtat tatgccaaat tttattgccg caacagttat
      961 gtcgcttgcg ttttgcatca gcgctatttc cgcatcagac tttatcatac ggcacggtat
     1021 cgtgatcggg ttagcactaa cataatttaa attagcagct tcctgccgaa cgccgtcaag
     1081 aataaaaaaa cgaagtcttt cttcgatacc gatatcaccg gcatgaattc cggcatcgtt
     1141 caatgcaaca acaactcgtt tgtacggact ctcatcttcc tgccacacat aaacatcttt
     1201 gccaattgaa atcagctcgc ggaaacggga ttcttcaaaa gccgggcaaa catattttgg
     1261 ttccccgctt gccggaatga tcgcgacgag tggccgttcg ctttgccacc agcttatgcc
     1321 tgtgaaatat tgcatggccg tgcccgcatc caataatatc gcttcgatct tttggtcatg
     1381 catgagcatt tgcgctttct ttatcctggc tgctctttct tcgacggtga tgggtgtgac
     1441 gttgctattc attatctgca gatcatacgt cgcaccaact gtttttttcg gcgttgcatt
     1501 tactaacgaa ctgattgatg tcgctactcc ggcagcagtc gcggcggaaa gattgataaa
     1561 ctgtcttcgt tttattttca tggcaacaac gggtatgatt ttggatgaag ataaatgtat
     1621 tattcatgcg atcgcactat ggcgcattca gctaaccacg atcagaaagc gggcgttccg
     1681 aacagttttg cgctgcaacc cttgcagaat tcgaaacaaa gaaacttgtt tttatcttct
     1741 tgctggagta gcatattaca atatttcggg aaccgcttcg ttgttcagga aagcgcatgc
     1801 tttattaaat caatatcaag atgaaaagaa cttttgtaat cacgggcttt tcccgttaca
     1861 cctaccctgc gctcatagaa aaaagccggc agatcgtttc cagtctgaat ggcgacgaat
     1921 gttttgctga cctgtcgcct atggtcgata cggtgaagat cgctatcgac gagtttgaaa
     1981 atacgcttca gcaaccaggc aacaatgaag cgatgatgaa gcaacaacat tatcgttttt
     2041 cattgatctt actcttaaat gatcttgcaa cttgtgtaca aaacagtagt aacaatgatg
     2101 tgacacttat gcagagaagt ggctataatt acatagtcaa cgaggcgtag caatgtcgcc
     2161 gttgctttcg ccatgaagcc gacttctttt aaaagatgat ttactgtgcc gcctcacgcg
     2221 gcacattcgt tgtttgcccg cactggttgt cgtttagttt cctctttcaa acttttattc
     2281 agtcacctac cggccaagtc agcggttgat caaaagggta tccgcacttt tcgtaatttg
     2341 ccgaaacata caagcaactc gaacaccgga tgaagattac tcaaggaatt atttacctgt
     2401 cagcctctga tctttctgct cacattagtt gtaaacatgt tacctggttg aacctgcagc
     2461 ttgcgcagaa aaagatccca ccgcctcctg tttatgaaaa tccttcactc gaagcgctgc
     2521 aaacaagagg ggaggagttt gaaaaaaagt atatcgaaaa actcaagcaa ggaggaaaaa
     2581 gcatagccga aatattcaaa ggaaatacgg aaaaggcttt ggaggaaacg gttcaggcaa
     2641 tgcgcgacgg agttgacgtt atctaccagg cgaggctcga acaagaaaca tggcacggct
     2701 gggccgactt tctcataaag gctgataaac caggcaaatt cggcgattgg tcttatgagg
     2761 taatggatac caaactgtca aaagaaacga aagccggtgc catcttgcag atcagtcttt
     2821 actctgaaat gcttgcacaa ctccagggtt gcaagcccga atacatgtac attaataatc
     2881 ccaccggaat acatgcttat cgcgtcgatg atttcggcgc atattacagg ctcgtcaaaa
     2941 aaaagttgtt acaaacgatc gatcaaccag atgaaactta tcccgaccct gtgcctcact
     3001 gcgacatctg ccgttggtgg cagctatgta atcaaaggcg gcgtgatgat gaccatctca
     3061 gcttcgttgc tggaatggga aaaaagcaaa taaaacaggc gaacaaatgg aatgtgaata
     3121 cgctcgaaca actcgctgac ctcgaggttc cattaaaata cgtcgcggaa acaggatcca
     3181 ttgaaactta tgaaaaatta gtttaccaat cgaaactgca acttactgca cgagtcacga
     3241 gaaagcctgc gtacgaaata ttggaattgg aggaaggatt tggtttttac caattacctg
     3301 agccttcgcc gcacgacatg ttcttcgatt tcgaaggcga cccgttcgtc gctgagaccg
     3361 ggcttgaata cttgttcgga tggatctatc atgacgaata ccatgacctg tgggctacgc
     3421 atgatttgga agagaagaaa gcactggaga tttttatgga tgaagtgatg cgcattcggc
     3481 agctcgatca aaacatgcac atttatcact tcggtgcata tgagccggca gcattgaagc
     3541 ggctggttgg aaagtatgca acaaaagaag agcagcttga taccttgcta cgatcaggtg
     3601 cttttgtaaa cctgcacacg atcacgcgtc atgcgttgag ggcaggtgtg gaaagctatt
     3661 cgttgaaaga cctggaaata tttcatcgat ataaacgggt aaaagatctg cgggaagttt
     3721 ctaaaaagaa aatgttgtat gaaggcttgc tggaaagtgg ctatgcgaac gccatcgacg
     3781 acgagaccag ggcggttgtg agagattata ataaagatga ttgcttatcg acgcaatcac
     3841 tgcgcaattg gcttgaacag cttcgcacaa aattgataaa cgaaggaaag gaaattcgaa
     3901 ggccggtttc ggaagaaggc aagccgggtg aaaatgttac cgaacaccag caaaagatca
     3961 aaccactatt tgacgtgttg atgcaagata ttcctttcga aagaaaagaa agaagcacag
     4021 aacaagaggc aaaatggtta ttggcaaaca tgctggattg gtaccggcgg gaaaagaaat
     4081 ctttttggtg ggaatttttc aggctttctg aattgccgga tgaagatctt ataactgaac
     4141 aaactccttt ggcaggtttg gtttttaccg gtagagaaga acgtgtaaaa aagagcgtgg
     4201 ttcattatta ccagtttcca caacaggaat ttgatttgga tgaaggagac aaggttgctt
     4261 ttaaaacgaa aacaattgga gagatctatt cgatcgacga attgcgccgg gtaataggca
     4321 taaaaaaatc gagagattct atagaggctc accccacgaa tgttgttgcc aaagatgata
     4381 ttcctgacaa accgaaggaa gaagcgatta tccggctcgc gcaatacgtg gttacaagtg
     4441 gactcacagg cgaaggcaag ttcaaagctg gcagagacct cttattaaga cacgtccgcc
     4501 tacctattga tccctctcaa attactgaca aaacaaaaag ggctatcgtc caggtgatga
     4561 acctagacaa tagtgtgttg ccaatacaag gtccgcccgg aacagggaaa agtcacacgg
     4621 cagcctgcat gatcattgcg ttaatgaaag ccgggaaaaa aattggcgtg tccgcgttaa
     4681 gtcataaagt gatcaatggc cttttaaaca aagtgactga aatggcattg cgcgaaaaaa
     4741 tgaatatcga tatcatacaa aaagttcggg aagactcgaa ggacaataaa ccggcatgga
     4801 atgaaagcac ggacaatgat gaagtcgcag atgcaattcg aaagcgatgc caggtcgctg
     4861 ccggcacttc gttcatgtgg gcgcgagagc aattttttga atcggtggat tatctttttg
     4921 ttgatgaagc aggccaatta tcgctgatcg atacgatcgc acttgctcat gccggaaaaa
     4981 atttagtgtt gatgggcgat ccgcaacaat taaaacagcc tcaaaaagga agccacccgg
     5041 aaggaactga agtctcggcg ctcgaacacg tcttgcaagg cgagaaaacc atttcaaatg
     5101 aacaaggttt gttcctcgaa actacatggc ggatgcatcc cgggataaat gattatatat
     5161 ccgaattgtt ttatgacggt cgcctgcatc ctaaagatga gacaagaaat caaacgctgg
     5221 aaggtatcac accatatcaa aagcccggct tgtatctgga aataacagat catgagggta
     5281 atcaaaatag ctctgcagaa gaagttgaaa aaattgtttc aatcgtaaat gcacttactt
     5341 gcggagcagt gtattgggtg gattgcgaca ggaagaaaaa tgtgctgcaa cctgggcata
     5401 tcaaaattat ttcaccatat aacgcacagg ttgaattatt gcaaagtgct ttaccgggaa
     5461 tgcaaatcgg aacggtggat aaattccagg gacaggaagc accggtaatc attttctcga
     5521 tggctacctc aacgccggaa gatgcgccaa gaggaatgga atttctctat agcctcaaca
     5581 ggctgaatgt ggccgtgtcg cgggcacgtg ccgtttttat cctcgtcgca aattcgtcac
     5641 tcttcgaacc attatgcaag tcgccgcatc aaatgcagct tgcaaacgct ttgtgcaggt
     5701 tgaaggaaat ggccgtgaat tgagtcgggc accttaaagc ttttggaaaa ccgaaagaga
     5761 tcggcacatc tcatgcattt ggaagggcgg cgggagtgca tacctcgaat gtaagtgccc
     5821 gcccctattt atcatcccaa cctacgtcga acatcactga atttctgact cattctggtc
     5881 ttaggttatc cacattcact ggataaattc tcggccggcc cgggctgcga attgacttta
     5941 tttgaaataa aaaatctatg caaacccgat cgaacaacac cattgttgcc atgcccgata
     6001 acagccacat ggaagtgacc tattattgta tggattcatt gctaacaaag caggaaaaac
     6061 agcaccacgt aagattattt attcaactgc acgattcctt ctgcactttg aaaatagaaa
     6121 aggcatattg cagcaatcaa agccaattgg aaagcatcgt tcataataaa gtcatcaata
     6181 cgaaagggtt tatttgttga tctgcttttc attttcacgg aactcgcctg cccgcttcaa
     6241 caaccgacag ataagataat cggatcgaag tctttaatca ctgaacccgc actattaagt
     6301 tcaattttgc atgtatattt gttttgattt tccccagcgg catgaggtac tggaaactgc
     6361 aagacacgga cagcttttac attaaatttt ttggaatttc taacaggact tgtgatgtag
     6421 atgtgaacgg tatatatttg tctgtatatt ttctttgcat aaataattga cgactactta
     6481 attcgagcca aaaccttatg gatagctgtt ttagaattta attagccaaa aagcttattc
     6541 cgaaatgtgc ttgtctctgg aagtatgaat taaaattaac aacataaaat ttacgcatga
     6601 tggatctcga cactgtattc gaaaacaagc gcttaaaaat tgcatggctg cttttgatct
     6661 catttatccc ggtctttttg aaagcacaaa ctctgaaaac aactgacctg gtgctttacg
     6721 ggaagcgcgt acaaattggt tcttcatcca acattgtcga cggttcagtg ggagcgctgt
     6781 cgtatattca aacgaatgga acggtaagct ttggaggtag tctttacagc gacagtgcca
     6841 ttatattgaa caataataac acggtaaatg gcgtggtaaa ggcgaacaat tcacgcgctt
     6901 catccgtaac ttttggaacg ccggtgtcag taggttccag cgctaatttg aaagacagcg
     6961 tgatcgcgaa cggcaacatt cgaattggag gaggatatgt aaagcaggtt tcgcaaccat
     7021 ccggtactac gtattcaggt cctgcgcctg ctctcggtcg ctcggtcgga ggtttacttg
     7081 ctctcccggt tttcccggcc atgccggcga caattccaat cggctcggtt ggttcaacta
     7141 acataaatca gagcacaacg ataacgccgg gtaaatatgg taatgtgagt ttatccggag
     7201 ggcaaacgat cacgctcgca ggcgccggga tatatatttt taactcgatc aaaaattccg
     7261 gcagcttcaa cactttcgta tttgattttc aaaacgtcgc cgggaacttc accgtacttg
     7321 ttctgggcga cattgacctc aacaaaaatt tcgtaaacat cataaacgga ggcgccgcaa
     7381 actatatctt tcttgagggc cttggaaatg gtgcaacatc atcgggcaat gctttcaatc
     7441 ttgcgaacgg ctcatcaggc ggaagaaatt ctgagtggaa gggaactgtt tggataccca
     7501 atggaaacat aagtattggg actggatcta aagcggtgaa cataaccggc gccttattca
     7561 gtaataatac catcaatatc tccagtaatg ttacaatggc ccatgccggt tatgtggact
     7621 tgcaaaacgg agacaacccg ttgatcattc cttcttatcc tccgccaccc ggaggcaaag
     7681 tcaataacgt catcggctcg cagctaacgt ccctgtttca aaattgggat ggcaccacaa
     7741 catttgaaga cagtgtgtac cgggtgatcg atagcaaagt attgatcgat gttattgtta
     7801 ctaaaggcca gtacgattac attctgaatt tattgcaatc accgggatat ggaatgaccg
     7861 gaattataga taacggtaac aacgcagtca tcaccggttt ctttccaatt gtaaatctgg
     7921 acaaactaaa cgcactcggc ctctatatca atcactgccg tccagtgttt ccgcctgtca
     7981 aaaacagcgg ggtaacgaat acaaatggtg atatttcaca gaagtcggat gtggcgcgaa
     8041 acgggtacaa tgtatttggt gaaaatgtga ccgtaggcgt tttgtcggac agttacaaca
     8101 accagggttt ggctccggct gacgtggtaa acgatgactt acccggaaat cccataaatc
     8161 ctgacgccgt aaatgtgatg gaagattatc cttttactgt gttcagcagg gcttctgacg
     8221 aggggcgtgc catgttgcag aacgttcatg atgtggcgcc gaaatctaag ctcgcgttca
     8281 ggacaggatt catttctgaa ggtgattttg cattaggcgt aagacaaatg gttgacgacg
     8341 ctgcttgtga tgttatcatc gatgatatta cctacataac gtcgcctttt ttcagggatg
     8401 gattcgtggc gcagtccgct aactatgcgc acgatcacgg caagacttac atctccgctg
     8461 ccgggaacta cggagcgaaa tcatactctg cgaattttaa tcccgtacct gcaccaggtg
     8521 ggcttaccgg ctacgcgcac aatttcaata catctggcgg gagcgacata ttgcaacaga
     8581 tatcactcgt gcccggtata tacacagtgg tgttgcagtg ggacaacgat ttttattctt
     8641 taggtggagc aaatcctact cctgttgacc ttgactttta cctggtcaat aatgcgggag
     8701 ccactttatt tggaatgaac tcaaacaact tccacagaga tccaattgaa gtgctttctt
     8761 tcgaggtgct tggtaacacc acaacaaata tcatggttac cagttcgaat gtttcaacta
     8821 acgtgcgatt caagtacatc atttttagag gcggggcaca gttcctggaa tacaacagcg
     8881 gcaattccac tatcgttgga caggccaatg cagatggagc gctggctgtg ggtgcagtac
     8941 gttacacgca aacgcccatc tatggagtaa ctcctccaca gatcgaatat ttctcatctc
     9001 ttggtggcac acctgtgaat ggagtactga gaaacaagcc cgatttcgct gcaccggatg
     9061 gaggcaacac aacagtcgat ctcggttcta cattgaatct tgaagttgga gaatccccgg
     9121 tcttcccaaa tttcttcggc acctctgctg cggcaccaca tgcgggtgga gtagcagcgt
     9181 tgttgatcgc aggaagtcaa aagttcagag ggaccgcaat tgctccggca gaaataaaat
     9241 caattctgca aagtactgcg attgacatgg taacacctgg cttcgacaat gtctcgggtg
     9301 ctggattcat ccaggcggac ctggcgatgc atacatttgg ttcgccaacg ccgacactgt
     9361 cataccttac gttgcccgcg ggaattacgg cggcaactcc gaccacgttc acattaacat
     9421 taacaggtga tttctttagt ccgaattcgg ttgtttatct gcgtgaccaa ccactcgtta
     9481 caacgatcat cagtcccaca caagcgacag cgattgtgcc tggtttcacc ggcaatccat
     9541 tgataaggat gtacacgcct cccgtatcgg caacgctgct tgacggcgga ttttcaaatg
     9601 gcatcaacat cttaagtatc cggaagaaaa aagtgtatgt gattgcagac aacaaatcca
     9661 aattgtatgg agaggtaatg ccgcaattca ctgcacatgt tttgatcgat agtattccgc
     9721 tgggtaatac caccct
//
LOCUS       DASQJI010000584         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_842266,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000584 DASQJI010000000
VERSION     DASQJI010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_842266"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VEV83_15885"
     CDS             complement(<1..198)
                     /locus_tag="VEV83_15885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK46658.1"
                     /translation="MKSLFIAAIASVALLTTSCMENKSENAENELQAIFPKGEKGSAE
                     NFTGNAWNTPLVANDSIYNTVI"
     gene            complement(314..742)
                     /locus_tag="VEV83_15890"
     CDS             complement(314..742)
                     /locus_tag="VEV83_15890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HYK46659.1"
                     /translation="MVSTHNKDIFEGLRNGEVIPSSDPDCYKLRHASFVTKRLLVHLN
                     NSCDAAQVRDLLSQITGTEIDKSDAVFTPLYINYRKNTKIGRNVFINFDCVFLDLGGM
                     TIEDGVLIAPKVTLLSEGHQVSPMDTHSFVPGHIYYISIH"
     gene            complement(807..1685)
                     /locus_tag="VEV83_15895"
     CDS             complement(807..1685)
                     /locus_tag="VEV83_15895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK46660.1"
                     /translation="MEKKNVRQVSEFNTELKLKGFNVFQIESDGGAVRAYSRKDFYKI
                     CLTTGKSNIHYADRTFEEEGTILFFGNPHIPYSWKTLSSTYIGYTVLFSEEFFKASDR
                     TESLQHSPLFKIGGTPILKIAEQQRTFLNTIFQKMIDEQKTDYAYKDDLIRNYINLII
                     HEALKLQPSEHYDQHKNAACRLTSVFLELLERQFPVESADNPLQFKTAHDYAAALHVH
                     VNYLNRAVKEVTGKSTTTHITERIASEAKALLQHTGWNIADIAYALGFEYTTYFNNFF
                     KRLTGINPKSLRLQQV"
BASE COUNT          668 a          460 c          504 g          737 t
ORIGIN      
        1 tataactgta ttgtatatgc tgtcatttgc aacgagtggt gtattccagg cattgccggt
       61 gaaattttca gcagaacctt tttcgccttt gggaaaaata gcttgcaact cattctcagc
      121 gttttctgat ttattttcca tgcaacttgt ggttagcaat gctacagaag cgattgcggc
      181 tataaaaagt gatttcatgc tattctgttt attaaacttt atgctgctca tctttattat
      241 ttactgtgat gcaaaagtga cattgcctga acccaataca gcagtcaatc ctgaatatta
      301 tcgatatgct ccattagtgt atagatatat aataaatatg tccgggaaca aaggagtgtg
      361 tatccatagg ggaaacctgg tgtccttcgg ataacagagt gactttcggg gcaattaata
      421 caccgtcttc aatggtcatg ccgcccaaat ccagaaaaac acaatcgaag ttgataaaga
      481 cgttcctgcc tattttagta ttcttgcggt agttgatata gagtggcgtg aacacggcat
      541 cgcttttatc aatctctgta cctgtaattt gacttagtaa gtcccttact tgtgcggcat
      601 cacaagagtt gtttaggtga accaataagc gtttcgtaac aaaagaagcg tgccgaagtt
      661 tgtagcagtc aggatcactt gacggaatta cttccccgtt tcgcaatcct tcaaaaatat
      721 ctttgttgtg agttgatacc atgctacaaa ggtcctgcgg ctggtgcagc cgtgagtaac
      781 gatattcaaa ccgataagta agaatttcaa acttgctgta gtcttaacga cttaggatta
      841 atgcccgtga gccttttgaa gaagttgttg aagtatgtag tgtattcaaa accgagggca
      901 taagcaatgt cagcgatgtt ccagccggta tgttgcagca gcgcttttgc ttcgctcgca
      961 atgcgttcgg ttatatgcgt tgttgtggac ttacctgtta cttccttcac tgcacggttg
     1021 aggtaattta catgaacatg caaagcagcc gcataatcgt gtgctgtttt aaactgcaag
     1081 gggttgtcag cactttctac agggaattgc ctctcgagca attcaaggaa aacggaagtg
     1141 agacggcatg ctgcattttt gtgttggtca taatgttctg aaggctgtag tttcaaggct
     1201 tcatgaatta taagattaat atagttgcgt atcagatcgt ctttgtacgc ataatcagtt
     1261 ttttgctcat ctatcatctt ctggaagatg gtatttaaaa atgttctctg ttgctccgct
     1321 attttaagaa taggcgttcc gccaatcttg aacagtggcg aatgttgcag gctttcggta
     1381 cggtcagacg ctttaaagaa ctcttctgaa aaaagtactg tatagcctat ataagtactg
     1441 gacagcgttt tccatgaata tggaatatgc ggattgccaa aaaacaaaat tgtgccttcc
     1501 tcttcaaaag ttctatcggc atagtgaatg ttgctcttgc ctgttgtaag acaaattttg
     1561 tagaaatctt tccggctgta agcgcggaca gctccaccat cactttcaat ctgaaacaca
     1621 ttgaaaccct ttagctttag ttcagtattg aactcggaaa cctgacgtac gtttttcttt
     1681 tccatgaacc gaagttaaga aattcaaata ggcaatactt ctcaaaatat acaggaataa
     1741 atgactgtaa tgttgggtgg atgtgtgttt gtattttagc tctttgtaag gttcgctttg
     1801 tctctgagtt ttgtgcgcct tgcaatgtgt taaaaatagc atcgccagac attaatattt
     1861 gacctgaacc ttatcttcaa gaaaaatgct ttcaataggg catttgtaca ggctgaacgt
     1921 tcaattaata tcttgccatg gcaactactt gtgttcgtgc aaacaagaca aacttcaaac
     1981 atacatgcgc aaactattat cgtaacaatt agtttgtttt tagtccaatt aaaccaagct
     2041 caaacccagc taactcatcc gcctggtaaa ttcataacgc ttaatggcgt caagttttgg
     2101 actgaacaat ctggcaaagg aactcccttg tttctggttg cgggcgggcc gggaggttct
     2161 catgttcaaa tgcacaccta cgacaattgg aggattcatc cttacttgtg ttccttgact
     2221 cttttggaac aggcaaatcc gatacgggaa aaagacgtga tgcaatatag catcgaggga
     2281 ggttgaaaac cttgaaggga agttggcagc ggcgaaatag acgtatctaa agttccgcct
     2341 ggaacatacc atttgaaaaa taatgcaac
//
LOCUS       DASQJI010000585         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1300965,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000585 DASQJI010000000
VERSION     DASQJI010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1300965"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..342)
                     /locus_tag="VEV83_15900"
     CDS             complement(55..342)
                     /locus_tag="VEV83_15900"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HYK46661.1"
                     /translation="METENITQLVDHLFRNESGKMVAVLTKLLGIERLETAQDIVQDT
                     LLKAMAVWSYSGAPKNPGAWLYHVAKNNAIDYLPARRLSKRSAPSFQSCAA"
     gene            complement(484..837)
                     /locus_tag="VEV83_15905"
     CDS             complement(484..837)
                     /locus_tag="VEV83_15905"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYK46662.1"
                     /translation="MEKFMFIFHLGHTDETRQRSPESIQAQMGKWWAWVEKLRKSDVY
                     VSGEPLQSGGKLVSGKNGNSVTDGPYTEGKEVVGGYFIVKATDYDEAVALAKDYPDFE
                     YGGSVQVRQVMKMDM"
     gene            complement(1042..1941)
                     /locus_tag="VEV83_15910"
     CDS             complement(1042..1941)
                     /locus_tag="VEV83_15910"
                     /inference="COORDINATES: protein motif:HMM:NF021527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe dioxygenase family protein"
                     /protein_id="HYK46663.1"
                     /translation="MNADNQATNYTSDLAPVELDLSKFLYQSFDASDLINVGNWSQYF
                     DEIPVDPYIKEGYRYKSIAWFRVKHRHSRPNEEIDEHIATVNQLSGMNDEDSRSYLST
                     STPSWQSDETGYQCWDLPQYALQQSILYNPVHGNLRREYPRISDGITHSEDFHRLLIH
                     YASFFGWGDAIVLIQFQRVDCFAARIGLPAVEGFHQDGNRHVGMLVITRKNITDDSGV
                     SQYVMDDNGKKSEELIFNSVIKPGELIYWNDKRVWHYGTELKVADASLNGGRGIRDII
                     ILSAKTPPANMPMGPVPEQFKRR"
     gene            2135..>2325
                     /locus_tag="VEV83_15915"
     CDS             2135..>2325
                     /locus_tag="VEV83_15915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HYK46664.1"
                     /translation="MKYEKEISRRRTFAIISHPDAGKTTLTEKFLLFGGAIQTAGAVK
                     SNKIKKHATSDFMEIERQRG"
BASE COUNT          595 a          540 c          500 g          690 t
ORIGIN      
        1 cctgtatctc gttttcaaga aagatatgtt cgagttcagg actggcgatg atctctatgc
       61 cgcgcagctt tgaaagctcg gtgccgatct ttttgaaagt cttctcgcgg gtaaataatc
      121 gatcgcatta ttttttgcga cgtgatacaa ccacgctccc gggttcttcg gcgcgccgct
      181 gtaactccaa accgccatgg ctttaagcaa agtatcctgc acaatatcct gcgccgtttc
      241 caatcgttcg atccccaaca gttttgtcag cacagctacc atctttcccg attcatttcg
      301 aaaaagatga tcaactaact gggttatgtt ttctgtttcc attgtggtta attggggaac
      361 tgggttactg gtttattggg ttatttgttt attgggatat tagtgtgccg gcgagcggaa
      421 tttttcatta agcttttcct aatctcccgg tatcccaata tcccaataaa caaattaact
      481 cgatcacata tccatcttca tcacctgccg cacttgcaca gagccgccat attcaaaatc
      541 aggataatct ttcgccaggg caacggcctc gtcgtaatcg gttgctttaa cgataaaata
      601 tccgcccaca acttcttttc cttcagtgta cggaccatca gtaacagaat taccattttt
      661 tccacttacc agcttgccac cggattgcaa cggttcaccc gacacgtaga catctgattt
      721 tctcaatttt tcaacccatg cccaccactt tcccatttgc gcttgaatgg attccgggct
      781 tctctggcgt gtttcgtcgg tatggccaag atgaaaaata aacataaact tttccatagt
      841 tgatcgtttt taaaattgat gaattgtttt gaatacaacg aatggagatc ttaacttcgg
      901 acaggtgcga aaattatttt gatttccttt ttctcatagg cggttcatgg tagccttgct
      961 ttcaacatgc accgggtcgg cgtgatgcaa tctcttgttt actacgtctc gaatacaaac
     1021 aggccgaatg taagtgctca cttaacgcct tttgaattgc tccggtacag gtcccatcgg
     1081 catatttgca ggcggtgttt ttgcgctgag tataataatg tcccttattc cgcggccacc
     1141 attcaggctt gcatccgcaa ctttcaattc tgtgccgtaa tgccacaccc gtttgtcatt
     1201 ccagtatatg agttcgcctg gtttgatcac ggagttaaaa ataagttctt cgcttttctt
     1261 cccgttatca tccatcacat attgactcac gcctgagtcg tccgtaatat ttttccgggt
     1321 aatgacaagc ataccgacgt gccggttgcc atcctggtga aaaccttcga ccgcaggtaa
     1381 tccaattctt gctgcgaaac aatcgacgcg ttgaaattga attaacacga tcgcgtcgcc
     1441 ccagccgaaa aaactagcgt aatgaattaa tagtcggtga aaatcttcgc tgtgagttat
     1501 accatcgctg atgcgcggat actctctgcg caaattgcca tgaacgggat tatataaaat
     1561 ggattgctgt aaagcgtatt gcggcagatc ccaacactgg tagcctgttt catcggattg
     1621 ccatgagggt gtgctggtgc ttaaatatga tctgctgtct tcgtcattca ttccgcttaa
     1681 ctggttaacg gttgcgatgt gttcatctat ttcctcattg ggacgagagt ggcgatgctt
     1741 aactctgaac catgcgatcg atttatatcg ataaccttct tttatatacg ggtcaactgg
     1801 tatctcatcg aagtattgtg accagttgcc cacattaatg aggtcggaag catcaaacga
     1861 ctgatacaaa aatttcgaga ggtccagttc aacgggagca aggtccgatg tgtaatttgt
     1921 ggcttgattg tcggcattca ttataaccgt tgtttgtgct gaacgaatgg taagatcggc
     1981 agcagcacaa aactacattt cttaaatcac ggggcgcatt tctttcactt gagaaacgct
     2041 ggcataaaaa ttttttctaa cccttacctt tgccggccga attcagaaga tggctgaggg
     2101 tttgaaagca gccgtaacgc cgataagaaa taagatgaag tacgaaaagg agataagccg
     2161 ccgcagaaca tttgcaatta tatcgcaccc cgatgccggc aagacgacgc ttaccgagaa
     2221 gtttcttttg tttggaggag cgattcaaac tgcgggtgct gttaagagca acaagataaa
     2281 gaaacacgct accagcgatt ttatggagat cgaaaggcag cgtgg
//
LOCUS       DASQJI010000586         7049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2377511,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000586 DASQJI010000000
VERSION     DASQJI010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7049
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2377511"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(556..1374)
                     /locus_tag="VEV83_15920"
     CDS             complement(556..1374)
                     /locus_tag="VEV83_15920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46665.1"
                     /translation="MKKQITRIDFKKMKFGRLPKLDDPRTFELAGYLSAAGLPEIPKK
                     YNWGKRIRRNNWGDMGNLKINLCTCAAAGHFIMTWTSNTGRLIRPKDEIILKAYCALT
                     NYDPQSGEPGEGVEAIRCLKYWRKHGVGEHRIVAFAKLEDKNREQLIKTIYLFGGCYV
                     GLNLPKSAERQYNTTKKWTIPRAGKKRDAEKGSWFGHAVLVTGYKNEELRIISWGQEM
                     IMTMDFWEAYAEESYAVFSESFIRHDKTPTGVDIDVLLNDLEILQQKKRASEPA"
     gene            complement(1389..1583)
                     /locus_tag="VEV83_15925"
     CDS             complement(1389..1583)
                     /locus_tag="VEV83_15925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46666.1"
                     /translation="MKNAVTLTAYGHELTVKLLDQLPSPGYYSNEPRYTSKYTTDATG
                     KLRATHLEYLWRRALTCKLS"
     gene            1629..2552
                     /locus_tag="VEV83_15930"
     CDS             1629..2552
                     /locus_tag="VEV83_15930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3078 domain-containing protein"
                     /protein_id="HYK46667.1"
                     /translation="MKKLFTLVCFLSPLYLLAQDTTIKNMQTEAGKTIAKDVNDTIPE
                     KWKTGGILSLNVSQGSLSNWAAGGEKFSMALNTFVNLHAFYKQNKTSWDNNLDFYLGY
                     VKTTSLGARKSDDRFDLTSKYGYALNSKWNVGGLFNLRSQFFKGYTYPDVNTKIYSSN
                     FFAPAYMILSPGFDWHPVKNLSVFVSPATARWVIVKDTSLSKLYGVEPGEKGDFQLGA
                     YLTINYMAALGKAVTYSGRLDLFSNYQHNPQNIDLYMTNLLAVKISNVLSFTYSLTLI
                     YDDDVRLFGPSQTAPALQLQSLFGAGLLVKF"
     gene            complement(2587..3378)
                     /locus_tag="VEV83_15935"
     CDS             complement(2587..3378)
                     /locus_tag="VEV83_15935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HYK46668.1"
                     /translation="MSIFIDQIGGKVVLGDPPQRIISLVPSITELLFDLGLQNKVVGI
                     TKFCIHPDAWCRMKTRVGGTKNVNTDLIASLHPDLIIANKEENVKEQIEQLQNFAPVW
                     VSDVSNLEDAVKMIHQIGELTATSTKAKEIVETIEGNFRLLAGTSNMNRRTVCYLIWQ
                     HPYMTVGGDTFIHDMLQRCGFENVFAHSLRYPEVSVEQIATAGCDAILLSSEPYPFKQ
                     QHAEELQKIFTKSSIKLVDGEMFSWYGSRLIPAASYLQNLVKELI"
     gene            complement(3511..5175)
                     /locus_tag="VEV83_15940"
     CDS             complement(3511..5175)
                     /locus_tag="VEV83_15940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYK46669.1"
                     /translation="MKKIVNSMALLCSIFIACNSQVSNSSTTDSTEEASKNVSSRDYG
                     ITRANSYSDLFFDSTKLESYISENKVPDSVARRMRSFYNTRNYQYAWFSSDGLTEQAL
                     GFWNLRNYDSYSGDSSLKNKALEKKMGAIMAEDSMTVGANDEAVLNTELGLTQQLIVY
                     MRSNYDKTNVKRKEMERFVPFKKSDAATIADSLINKKHKDEGYYEQINDDYKALKDQL
                     GKYLQIVKSGGWPQIRGDAKAFKKGASSPQIAALKKRLQISEDMPAGDTSMVFDDTLV
                     NGIKHFQQRLGLTPDGLMSAALLKDLNVSAEQRLQQILVNLYRMRWMPQEPDGRLILV
                     NIPEFELHLYEGKNKVFDMDVVVGKEGHNTMMFTGKLSQIIFNPYWNVPPSIVKKEIL
                     PKLESNPNYLSSQQMEVTGNEGGLPRIRQLPGDKNALGHVKFLFPNSYDIYFHDTPAK
                     ELFKKDKRAFSHGCIRLAEPEKMADYLLKDNPDWPAEKIHEAMTGDDQQSVNLKDPVP
                     VFITYYTAWVDETGLNFRDDIYKRDSTVAGKMFNGAAPAREVAEQK"
     gene            complement(5391..6254)
                     /locus_tag="VEV83_15945"
     CDS             complement(5391..6254)
                     /locus_tag="VEV83_15945"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HYK46670.1"
                     /translation="MQDATTFDSLFRQAVLAVDSGDEDHLKQLLNTHPELAIQRLHAP
                     GEWLTTMIADALDSFYKHPYLLWFIAEDPARNNRLPANISNIAIIIIQKARSENALTL
                     QEQLDYAIRLVAWSWVARACGVQLDLLNVLIDAGALKDGVSDDALVNGNFAAARHLVE
                     RGAKLSLSTALCLDQWAEADRIAPTATAEEKQFSLVLAALHGKADAVARAISYGADAS
                     KRSAHLYSHATPLHHAAVSGSLETVKLLVEAGADLNMRDSIHNGTPLGWAEYAKHTAI
                     AEYLRKAGAKE"
     gene            6383..6760
                     /locus_tag="VEV83_15950"
     CDS             6383..6760
                     /locus_tag="VEV83_15950"
                     /inference="COORDINATES: protein motif:HMM:NF019491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dabb family protein"
                     /protein_id="HYK46671.1"
                     /translation="MRKILMMSLLLLTIAHANNLNAQNGNAVLRHIVIITFKTDAPTD
                     SVKALDDLYRSLSKGGMVKDFETGVNISMRDTGVVKHVYVTSFASKEDMDSYRKMPDY
                     SQLFKLSLPVASEVTVADYWTNK"
     gene            6852..>7049
                     /locus_tag="VEV83_15955"
     CDS             6852..>7049
                     /locus_tag="VEV83_15955"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK46672.1"
                     /translation="MDATEKNTADALFVKMVMLAWQNQNNEANKLLDALSDEQLSAQT
                     APGRNSGIYLLGHLAAINDNLF"
BASE COUNT         1861 a         1605 c         1497 g         2086 t
ORIGIN      
        1 cgaaatattt tatgtctttg tagtttatat ctcatacggg tgttggccga tcattgctat
       61 ttggctggct catgccggta cgcgatttcg aagggaaatt acgctttatt gtgccggata
      121 tttgcatttt aatgtgcgcg aaacttgctg gtcttgatcc tgcagcagtt ttcatagcaa
      181 atcgttgtca ttttggtttc tttttttgca aaaagaaaat tgaaaatagt caataaccgg
      241 aaataaatta attaatattg ctttcgagaa ctggtatgta tgtcccacga ctgctgatga
      301 accggttata tctatcattt aaatcaaaaa attatggcaa ctgcaaaaaa gggcgctaag
      361 aaagcagctc ctaaaaagaa agcagcatcg aagaaaaaac cgattaagct gggtggcatt
      421 ccaacgaaag gaggaggagg ttagaaaaac cgtgatccca aaaaatccgt accaacaacg
      481 atggaaataa ttcaaaagcg aaataaaaat ttatagcgtt tttttgggaa ctcattcacc
      541 tttgaatgca aacgattaag cgggttcaga agcccgcttt ttttgttgta agatctccag
      601 gtcattcaac aacacatcta tatcaacccc ggttggcgtt ttgtcgtgcc tgataaacga
      661 ttcgctgaat acggcatacg attcttcagc ataggcttcc caaaaatcca ttgtcattat
      721 catttcctgt ccccagctaa tgattcgaag ttcttcattc ttatatcccg ttaccaaaac
      781 ggcatgtcca aaccatgagc ctttttcggc atctcgtttt ttgcctgcgc ggggtatcgt
      841 ccattttttt gtagtgttat attgcctttc cgcagacttt ggcagattca gcccgacgta
      901 acaaccgcca aacaggtata ttgttttgat taattgctca cgatttttat cctcgagctt
      961 ggcgaaagct acaatcctgt gctcgccaac gccgtgttta cgccagtatt tcagacacct
     1021 gatcgcttca acaccttcac caggctcgcc gctttgggga tcgtaattcg tgagcgcaca
     1081 atacgctttc aagataattt catctttcgg ccttattaac ctgcctgtgt tggatgtcca
     1141 cgtcatgata aagtgccctg ccgctgcaca tgtacacaag ttgatcttga gattacccat
     1201 gtccccccag ttgttccgcc tgatcctttt tccccaatta tatttttttg gaatttcagg
     1261 cagacccgcc gcgcttaaat atccggcaag ttcaaaagtt cgagggtcgt caagtttagg
     1321 caacctgcca aacttcattt ttttgaagtc gattcttgtg atttgttttt tcataccgag
     1381 cgatgaaatt aactcaattt acaagttaat gcacgacgcc acaaatactc caggtgcgtc
     1441 gcccgtaatt tacctgtcgc gtctgttgtg tatttcgatg tataacgcgg ttcatttgaa
     1501 taatagcctg gtgaaggaag ttggtctaat aacttaaccg ttaactcgtg accatacgcc
     1561 gtcaaagtga ctgcattctt catttatatt tgattaacgt ttggctaact cattcaaaaa
     1621 tcaagacgat gaaaaaactt tttacacttg tatgcttcct gtcgccttta tacctgctcg
     1681 cccaggatac cacaataaag aacatgcaaa ctgaggcagg caaaacgata gcaaaagatg
     1741 tgaatgacac cataccggaa aaatggaaaa cgggaggaat tttgagcctg aacgtttctc
     1801 aaggttcgtt gagtaactgg gctgctggcg gtgaaaaatt ttccatggca ttgaacacgt
     1861 ttgtaaacct tcatgcattt tacaagcaaa acaaaacaag ctgggacaat aatcttgact
     1921 tctatcttgg gtacgttaag accacgagtt tgggagcgcg caaaagcgat gaccgttttg
     1981 atctcacatc caaatatggc tatgcactga attcgaaatg gaacgtgggt ggattgttca
     2041 atttacgatc gcagttcttt aaagggtata cgtacccgga tgtaaataca aaaatttatt
     2101 cgtcgaactt ctttgctcct gcgtatatga tactgagccc ggggtttgac tggcacccgg
     2161 taaaaaatct ttccgtcttt gtttcccctg caaccgccag gtgggttatt gtgaaagata
     2221 cttcgctgtc taaattgtac ggagtagagc ctggtgagaa aggggatttt cagcttggcg
     2281 catacctaac gatcaattat atggctgccc ttggcaaagc ggttacttat agcggcagac
     2341 ttgacctttt ttcaaactat cagcacaacc cgcagaacat cgatttgtat atgacaaatc
     2401 ttcttgcggt aaagatctcc aatgttcttt cgttcaccta cagcctcacg ttaatttatg
     2461 acgatgatgt aaggcttttc ggaccaagcc aaacggcgcc agccctgcag ttgcaatccc
     2521 tgtttggcgc aggattgctt gttaagtttt aatataaaga gtttcgtcgg cagaccgtga
     2581 gtctgtttag atcaactcct ttaccaggtt ttgcaggtaa ctggctgcag gtataagcct
     2641 gcttccatac caactgaaca tctctccatc aactaatttg atggaggatt tcgtgaatat
     2701 tttttgaagt tcttctgcgt gttgttgttt gaacggatac ggctccgacg agagaagaat
     2761 agcgtcacaa cccgcagttg caatttgttc tactgagacc tccgggtaac gaagactgtg
     2821 agcaaataca ttttcaaaac cgcaacgttg cagcatgtca tgaataaacg tgtcgccgcc
     2881 aacagtcatg tatggatgtt gccagatcag gtagcaaact gttctgcggt tcatgtttga
     2941 cgtacccgca agcagtcgaa agttcccttc gattgtttca acgatctctt ttgcctttgt
     3001 gctagtagca gtaagttctc cgatttgatg aatcattttc accgcgtctt ccaagttact
     3061 tacatcactc acccaaaccg gcgcgaaatt ttgaagctgt tcaatttgtt ctttcacatt
     3121 ttcttccttg ttcgcgataa tcagatccgg atgaagtgac gcgatcagat cagtattgac
     3181 atttttggtc cctccgacac gagtcttcat tctgcaccac gcatcagggt gaatgcaaaa
     3241 tttagttatc cctacgactt tattttgtaa gcccaaatcg aacagtaatt ctgttatcga
     3301 aggaaccaaa gaaattatgc gttgcggtgg atcgcctaag acaactttgc ccccgatctg
     3361 atctatgaaa atggacatac gctttaatgt tgcgaatgtc tacgaagtta caatgatgaa
     3421 atcacgcact cactgcagaa cttttttcat cacacttcat gaagaatcgc ccttgcctgg
     3481 acgatctcct atagtggcga cactagcgta ttatttttgt tctgccactt ccctcgccgg
     3541 cgctgcaccg ttgaacatct ttcctgcgac cgtgctgtct cgtttgtaga tgtcatcgcg
     3601 gaagttaagg cccgtttcat caacccatgc cgtgtaatac gtaataaata caggaacagg
     3661 atcttttaaa ttcacgcttt gctgatcgtc gccggtcatg gcttcatgaa ttttttcagc
     3721 gggccagtca ggattatctt ttaaaagata gtccgccatc ttttccggtt ccgctaatcg
     3781 aatacaaccg tgactgaaag ctcgtttatc ttttttgaaa agttcttttg caggagtatc
     3841 gtgaaaataa atatcgtagc tgtttggaaa taaaaacttc acatgcccca atgcattttt
     3901 atcgcctggt aattgcctta tccgcggaag accgccttca tttcccgtta cttccatctg
     3961 ctggcttgaa agataattag gattgctttc gagttttggc aatatctctt tcttcacgat
     4021 gctcggtgga acattccagt aaggattaaa aataatttgg ctgagctttc ccgtaaacat
     4081 catcgtatta tggccttctt ttccaacaac cacatccatg tcgaacactt tattctttcc
     4141 ttcatataaa tgcaattcga actccggaat atttacaagt atcagcctgc catccggttc
     4201 ctggggcatc cagcgcatcc ggtacaggtt tactaagatc tgttgcaatc tttgttctgc
     4261 ggacacattc aaatctttta gcagtgcggc agacatcaat ccgtcaggcg ttaagccaag
     4321 ccgttgctga aaatgtttga taccgttgac caaagtgtca tcaaacacca tggaggtgtc
     4381 acctgcgggc atatcttctg atatctgcaa tcgtttctta agcgctgcaa tttgtggaga
     4441 agatgcgcct ttcttaaaag cctttgcatc accccttatt tgtggccatc caccagattt
     4501 tactatctgc aggtattttc caagttgatc tttcagcgct ttgtaatcat catttatctg
     4561 ttcataataa ccttcgtcct tgtgcttctt gttgatcagt gaatcggcaa ttgttgcagc
     4621 atccgatttt ttgaaaggca caaaccgctc catttctttt cgcttcacat tcgtcttgtc
     4681 gtaattgctg cgcatataaa cgataagctg ttgcgtcaag ccgagttcgg tgttcaggac
     4741 agcttcatca ttcgcgccca cagtcatcga gtcttcggcc ataatagcgc ccatcttttt
     4801 ttcgagagct ttatttttta atgatgaatc ccctgaataa ctgtcgtagt tgcgcaaatt
     4861 ccaaaatcca agggcctgct ctgttaagcc atctgaggaa aaccatgcgt actggtagtt
     4921 ccttgtgttg taaaagctcc tcattctgcg cgccacagaa tccggcactt tattttccga
     4981 aatgtaactt tcgagctttg tgctgtcaaa aaacaggtcg ctgtaagaat tggcacgcgt
     5041 gataccgtaa tcgcggctgc tcacgttctt cgacgcttct tctgttgaat ctgtggtgct
     5101 ggaattagaa acctggctgt tacaggcgat aaaaatgctg cacagcaggg ccatggagtt
     5161 aacgattttt ttcataatcc caattttaca aaaggcatgc cgcccccaaa cggtaaaccg
     5221 ggtttagttg tttttgcaac tgacggtggg cattaaggta agcgtgttca ggaaaggacg
     5281 cccaaaacgt taaagatttc ctcaccttca ctcttcccga agcggattcg caaaaaatgt
     5341 gattgatcag gagtagctta cgttattctg tttgcaacat tcatgcgcag ttattctttt
     5401 gcgcctgctt ttcgcaagta ttcggcgatc gcggtatgct ttgcatattc tgcccagccc
     5461 agcggcgttc cgttatgaat gctgtcccgc atattgaggt cagcgccggc ttccaccaaa
     5521 agtttcacgg tttcaagaga accggaaacg gcggcatgat gaagtggcgt cgcgtgagaa
     5581 tataagtgcg cgcttcgttt gctggcgtcg gcaccatatg aaattgcccg ggcaaccgca
     5641 tcagcttttc catgaagtgc tgcgagcacc aggctgaatt gtttttcttc agcagttgca
     5701 gtgggcgcaa tgcggtctgc ttctgcccat tgatccaggc acagggcggt cgacaaactt
     5761 agtttggcac ctcgttcaac cagatgcctc gctgctgcga aatttccatt cacaagtgca
     5821 tcatcactaa cgccgtcttt caatgcgccg gcgtcaatca gcacatttag cagatcgagt
     5881 tgcacgccgc atgcacgcgc aacccacgac catgcaacca acctgatagc ataatccagt
     5941 tgttcttgca gtgttagcgc gttttctgat ctcgctttct gtataataat gatcgctatg
     6001 tttgaaatgt ttgcaggaag acggttgttt cgcgcagggt cctctgcgat aaaccacagg
     6061 agatacggat gtttatagaa gctatcgagc gcatcggcga tcatggtcgt cagccattca
     6121 ccgggtgcgt gcagacgttg gatggcgagc tcaggatgag tattcagcaa ttgtttcagg
     6181 tggtcttcat cacctgaatc tacggcgagg accgcttgcc gaaataatga atcaaaagtt
     6241 gttgcgtcct gcatgatcag gaatttttaa gctcacgtta taactgctgc gacgaaaaaa
     6301 ctggctgaca cagtacaagc ttatacgcgt gaaaacgaac gatcaaaatt atgattagct
     6361 tacagttcta aacttctttt caatgagaaa gatattgatg atgtccctcc ttctattgac
     6421 gatcgcgcat gccaataatt taaacgcaca aaacggcaac gctgttttaa ggcacattgt
     6481 gatcataaca tttaagactg atgcacctac ggacagcgtt aaggcgttag acgatctgta
     6541 ccgcagtcta tcgaaaggcg gcatggtaaa agattttgaa accggcgtaa atatttcaat
     6601 gcgcgatacc ggcgtggtaa agcatgttta tgtaaccagt ttcgcgtcga aagaagacat
     6661 ggacagctat agaaaaatgc cggactattc acaactgttc aaactttcgc tccctgttgc
     6721 aagcgaggtc actgtcgctg attattggac aaataaatga gaacttgtgc gacccggctt
     6781 gtatcgggcc acgcccaaag tttattttgt attggtcgaa ataattatcg cacatttaaa
     6841 aaatacgaaa catggatgca actgaaaaga ataccgccga cgcgttgttt gtaaaaatgg
     6901 tgatgctcgc atggcaaaat caaaacaatg aagcaaacaa attgcttgat gcgctttcag
     6961 atgaacaatt gtcggcgcaa acggcgcccg gaagaaacag cggcatttat ttgcttggac
     7021 atcttgctgc gataaatgac aatttattt
//
LOCUS       DASQJI010000587         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_228448,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000587 DASQJI010000000
VERSION     DASQJI010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228448"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VEV83_15960"
     CDS             <1..273
                     /locus_tag="VEV83_15960"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HYK46673.1"
                     /translation="GFTKWILRKAIQTWLPAEIAWRKDKTAYEPPQKKWLQDPAIKEM
                     IMEGRKELVKQGVLLKKVLDQPVQAKAAHDDDNFDWRYLSAAYLFR"
     gene            complement(279..704)
                     /locus_tag="VEV83_15965"
     CDS             complement(279..704)
                     /locus_tag="VEV83_15965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46674.1"
                     /translation="MKKLVSYAASMLIVLSVAAAPDSKTIRLFNQTFPNAQNVKWYDN
                     TSGHYAYFTQNGYSERALFSKQGQFICSWKYGDEKILPTNIMMAISKRYSDGKVIGAT
                     EYTEGDNMSYEVKVTKGANWYNVNLLPDGTIVNEAKYKN"
     gene            1070..>2130
                     /locus_tag="VEV83_15970"
     CDS             1070..>2130
                     /locus_tag="VEV83_15970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK46675.1"
                     /translation="MNDDTNTTPGNSRLKTATKYIRAGAEPDPSTGSITPAIYQTSTY
                     VQAAPGNNKGYEYARSQNPTRFALERACAEIENGKFGLVFSSGVAATDAVIKLLKPGD
                     EVIAANDMYGGTYRLFSKVFEKFGIKFHYVNMVDLKNVENVMNENTKLIWLETPTNPL
                     MNIVDISAVSALAKQRKALVAVDNTFASPYLQNPLDLGADIVMHSSTKYLGGHSDVIQ
                     GCLVINEQSLRDELYFIQKSCGAVPGPQDCFLVLRGIRTLHIRMQRHCENGETIANYL
                     RSHPKVAKVYWPGFEDHPNHDIARKQMHGFGGMLSFELKDDSAAELKRVVSSTKIISL
                     AESLGGVESLINHPATMTHA"
BASE COUNT          615 a          445 c          484 g          586 t
ORIGIN      
        1 ggcttcacaa agtggatact tcgtaaagcc atacaaacct ggttgcctgc agaaattgcc
       61 tggagaaaag acaagacggc ttatgaaccg cctcagaaaa aatggctgca ggatcccgct
      121 attaaagaaa tgataatgga aggccggaaa gaacttgtaa agcagggggt gttattaaag
      181 aaagtactgg accaacccgt tcaggcgaaa gccgcacatg atgacgataa tttcgactgg
      241 cgatatcttt cggcagcgta cttgttccgc tgaccgcttt aatttttata cttcgcttcg
      301 ttaacgattg tgccatcagg gagtaagttc acattatacc agttggcgcc ctttgtgact
      361 ttaacttcat agctcatgtt atcaccttcc gtatattcag tagcgccgat aaccttccca
      421 tcgctgtatc ttttgctgat ggccatcatg atgttagtcg gaagaatttt ctcatctccg
      481 tatttccatg agcaaatgaa ctggccttgc ttgctgaata acgcccgttc tgaataaccg
      541 ttttgcgtga agtatgcata gtgaccagat gtattgtcgt accattttac gttttgtgcg
      601 ttcgggaaag tttggttgaa caatcggatg gtctttgaat ctggcgcagc agctacggaa
      661 agaacgataa gcatgctcgc agcataggaa actaattttt tcataacatc tctttttatt
      721 ggtaattgaa tccatgaatt tacagggcgc attaaatacg agtcaaccca ttatacaccg
      781 ctggtttgtt aaatggagtt atgaactttg attttgttgg ttgcttgaac accgaaacat
      841 agaaatcgaa tcacaaagcc ggatattata ccgctgaaat aagatgcctg cactcttttc
      901 tcttctttga tggaatttgt taacgtctgt taatccggtg atgaatggtt atggcgttgc
      961 cggttaagag tggaattttc ataatctttg tgcgccatga gagttggtac atgcatttca
     1021 aaaatttcac tcaactatca attaaataaa ttcaaaattt cctgagcaaa tgaatgacga
     1081 cacgaatact acgcctggca acagtcgctt gaaaacggcg acaaaatata tccgtgccgg
     1141 ggctgagccc gatccgtcta caggctctat tacgcctgct atttatcaaa cgtctacgta
     1201 tgtgcaagcg gcgcccggaa acaacaaagg atatgaatat gcacgttctc aaaatccgac
     1261 ccgctttgct ttggagagag catgtgcaga aattgaaaac gggaagtttg gtttggtatt
     1321 cagcagcggc gtagctgcaa ctgatgccgt gatcaaacta ctcaaaccgg gagatgaagt
     1381 aatagcagcc aacgatatgt atggcggcac gtatcgcctt ttctcaaagg tgtttgaaaa
     1441 gtttggaatt aaatttcatt acgtcaatat ggttgacttg aagaatgtag aaaacgtaat
     1501 gaatgagaat acaaaactca tatggcttga aacgccaacc aatccactga tgaatatcgt
     1561 tgatatttcg gcagtatccg ctcttgcaaa gcagcgcaaa gcgttggttg cggttgataa
     1621 tactttcgcc tcaccctacc tgcaaaatcc gcttgatctc ggagcagaca ttgtgatgca
     1681 ttcttccaca aaatatctcg gtgggcacag cgatgtgatc cagggctgcc ttgttatcaa
     1741 cgagcagtcg ctcagggatg aattatattt tattcaaaaa agttgcggtg cggtgccagg
     1801 cccgcaggat tgctttctcg tgttgcgggg aataagaacg ttacatatac gaatgcaacg
     1861 acattgcgag aatggagaaa ccatagcgaa ctatttgcgc agtcatccaa aagttgccaa
     1921 agtatattgg cccgggtttg aagatcatcc aaatcacgac atcgccagga aacaaatgca
     1981 cgggtttggc ggcatgctta gttttgaatt aaaagatgac agcgctgcag aactcaaaag
     2041 agtcgtgtcg tcaacgaaaa ttatttcact cgcagagagc cttggcggtg tcgaaagttt
     2101 gatcaatcac ccggcaacca tgactcatgc
//
LOCUS       DASQJI010000588         3147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2072137,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000588 DASQJI010000000
VERSION     DASQJI010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2072137"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VEV83_15975"
     CDS             <1..180
                     /locus_tag="VEV83_15975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617203.1"
                     /note="chaperone Hsp40; co-chaperone with DnaK;
                     Participates actively in the response to hyperosmotic and
                     heat shock by preventing the aggregation of
                     stress-denatured proteins and by disaggregating proteins,
                     also in an autonomous, dnaK-independent fashion; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HYK46676.1"
                     /translation="EVNGYGRGDQLIHVNVWTPQNFTHEEKEMLDRMNSSPNFKPQPG
                     KSEKSFFEKVKEVFS"
     gene            complement(182..718)
                     /gene="hpt"
                     /locus_tag="VEV83_15980"
     CDS             complement(182..718)
                     /gene="hpt"
                     /locus_tag="VEV83_15980"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HYK46677.1"
                     /translation="MESVRIHDKVFVPYLPQHEIEAAIKDLAARIDADYAGERPLFIP
                     ILNGSFMFSSELFKSLKVPSEICFIKLASYKGTTSAEHVITSIGLDTNISGKHVIILE
                     DIIDTGKTLSQFLPQLYNQHPASLKIAAMLHKKDATVYDVPLDYCCFSIPDKFVVGFG
                     LDYDGLGRNIPAIYQLDE"
     gene            complement(745..1734)
                     /locus_tag="VEV83_15985"
     CDS             complement(745..1734)
                     /locus_tag="VEV83_15985"
                     /inference="COORDINATES: protein motif:HMM:NF013954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HYK46678.1"
                     /translation="MKKLIVFFFSAVLWFSGQAQYNDAVLAYIDEYKDLAIDEMVRTG
                     VPASITLAQGILESQAGQSDLTLESNNHFGIKCKDEWTGNVVYHDDDAKNECFRSYSS
                     AEQSYRDHSDFLRSRPNYAPLFDLDVTDYKAWAYGLKKCRYATSSTYAQSLINYIEKY
                     NLEQYTDIALQGSRQMNVASSNVHMQQNFAFTNTRNVVVETTPRNDPGAANYPAGVFR
                     INQTNVLYAKAGTSLFAIASQFSIPYNKLLQYNDLDKVDILPQGTLIYLEKKQKRGAK
                     DYHVVSHNENVYDIAQEEGVQLESLLAYNNMQKNSQPKAGDKILLHGDSRKLF"
     gene            complement(1731..2375)
                     /locus_tag="VEV83_15990"
     CDS             complement(1731..2375)
                     /locus_tag="VEV83_15990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HYK46679.1"
                     /translation="MQWIEPIAEEYASLHTSALDETLQQIYDDTIANHPESGMMSSPV
                     QGKFLEFISCMLRPKYILEIGTFTGFSAICLAKGLQDGGELHTIELRDDDANRAWKNI
                     SLAGMHKKIHLHRGDAHTIIPELNYKWDFVFIDADKTSYITYYEEVLQRLSERGHILA
                     DNVLFHGQVLEEKIDGKNAKAIESFNKHILKDQRTEQVFLTIRDGLLLLKKKSS"
     gene            complement(2375..>3147)
                     /locus_tag="VEV83_15995"
     CDS             complement(2375..>3147)
                     /locus_tag="VEV83_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HYK46680.1"
                     /translation="SGSFWMKQILGGAFLTIGMTGLDQEMMQKNISVRTLKDSQKNMF
                     TFSIISVGVNFLFLFLGGLLYVFAASNNVAIKGDDLFPTVALHYMPAVVSIIFIIGLI
                     SALFPSADGALTALTSSFCIDILGIRRREELSERERKRTRLLVHFTFACIFCLCIMVF
                     KWINDKSIINIILTVAGYTYGPLLGLFSFGIFTKRILPQSAAIVAVCFAAPILCYLLS
                     LNAVKWFNGYQIGIELLLINGLVTFAGLFFISKKPPVA"
BASE COUNT          885 a          711 c          677 g          874 t
ORIGIN      
        1 gaagtgaatg gttacggccg cggcgaccaa ctcattcacg taaatgtctg gacgccacaa
       61 aattttacgc atgaagaaaa agaaatgctg gaccgcatga attcaagccc gaattttaaa
      121 ccgcaacccg gaaagagcga aaaaagcttt tttgaaaaag tgaaagaggt cttctcttaa
      181 actattcgtc cagttgatag atagccggga tattgcggcc aagtccatca taatctaaac
      241 caaatccaac cacaaatttg tccggaatag aaaagcagca atagtcaagc ggaacgtcgt
      301 ataccgttgc atcctttttg tgcaacatag cagctatctt caaagatgca ggatgctggt
      361 tatataactg cggtagaaat tgactcagcg ttttgcctgt gtcgatgatg tcttcgagaa
      421 tgatgacatg cttcccactg atatttgtgt cgagaccgat agaagtgatc acatgctcgg
      481 cagatgtggt tcctttataa gaggccagtt taatgaagca aatttcggaa gggactttca
      541 gggatttaaa cagctccgac gagaacataa aagagccgtt cagaattgga atgaatagag
      601 ggcgttcgcc ggcataatcc gcatcgatcc gtgcagcgag atctttgatc gcggcttcta
      661 tttcgtgttg cggcaggtaa ggaacaaaga ccttatcgtg aatacgtacg ctttccatgc
      721 agcaaagatt tgctgcaaac tacattaaaa caatttgcgg ctgtctccat gcagcaaaat
      781 tttgtcaccc gctttgggct gactattttt ctgcatgtta ttgtatgcga ggaggctttc
      841 aagttgaacg ccttcttcct gcgctatatc atacacgttc tcattgtgag aaacaacatg
      901 ataatctttc gcaccccgct tttgtttttt ctcgagatag ataagtgtgc cctggggcaa
      961 gatgtcaacc ttatcgaggt cgttgtactg gagcaattta ttatagggaa tactgaactg
     1021 gctcgctatt gcaaataacg aagtgccagc ctttgcgtac aatacatttg tctggttgat
     1081 cctaaataca ccggcaggat aattagcagc accgggatca ttgcgcggtg ttgtttcaac
     1141 aaccacattg cgcgtgttgg tgaaggcaaa attttgttgc atgtgcacgt tcgatgaggc
     1201 cacattcatt tggcgacttc cttgcaacgc gatatccgta tattgttcca ggttatattt
     1261 ttctatataa ttgatcagcg attgcgcata agtagagctg gtggcatacc tgcatttctt
     1321 cagcccgtaa gcccacgcct tgtaatccgt cacatcgaga tcaaatagcg gagcgtaatt
     1381 agggcgtgat ctcaggaaat ccgagtggtc gcggtacgac tgttcagcag atgaatagct
     1441 gcggaagcat tcgttttttg catcgtcatc atgatacacg acgtttcccg tccattcatc
     1501 cttgcactta attccaaaat gattgtttga ttcgagcgta aggtcgcttt gaccggcctg
     1561 cgattcaagg attccctgcg ccaaagtgat ggacgcaggc acgccggtgc gcaccatttc
     1621 atcaatcgcg aggtctttgt actcgtcaat gtaggctaaa accgcatcgt tgtattgagc
     1681 ttgtccgctg aaccataata cagcagaaaa aaagaacacg atcaatttct tcatgaagat
     1741 ttctttttta gaagcagcag gccgtctctt atggttagaa acacctgctc tgttcgctga
     1801 tccttaagta tatgtttgtt aaaactttca atggctttgg cattcttgcc gtcaatcttt
     1861 tcttccagaa cctggccgtg aaacagcaca ttatccgcca aaatgtggcc acgttcactt
     1921 aaacgttgca atacttcctc atagtatgtt atataggaag ttttatccgc atctataaat
     1981 acaaagtccc atttgtagtt cagctccggt atgatcgtgt gagcatcacc tctgtgtaaa
     2041 tgtatttttt tgtgcattcc tgccaaagaa atatttttcc acgccctgtt agcatcgtca
     2101 tcacgaagct ctattgtgtg caattcacca ccgtcctgca gtccttttgc caaacatatc
     2161 gcgctaaaac cggtgaaagt tcctatctcc aaaatgtact tcggccgcag catacaactg
     2221 atgaattcca ggaatttgcc ctgcacaggg ctgctcatca ttccagattc cgggtgattt
     2281 gcaattgtat catcatagat ctgttgaaga gtttcatcca acgcggaggt gtgtaacgac
     2341 gcgtattctt ccgcgatggg ctcgatccat tgcatcaggc aacaggaggc ttttttgaga
     2401 tgaagaaaag gccggcgaag gtaaccaatc cgtttataag caacaactcg atcccgattt
     2461 gataaccgtt aaaccattta acagcattta gactgagcag gtagcagagt atcggtgcag
     2521 caaaacatac agccacgatt gcggccgatt gaggcaaaat tctttttgta aaaatgccaa
     2581 acgaaaacag cccgagtaac ggtccgtaag tatatcctgc cacagtgaga atgatattta
     2641 tgatcgactt gtcatttatc cacttaaaca ccattatgca cagacaaaaa atgcatgcga
     2701 acgtaaaatg caccagcagc cgtgttcttt ttctctcccg ttcgctgagt tcttccctcc
     2761 ttcttatgcc aaggatatcg atacaaaaag aagatgtcag tgcggtgagc gcaccgtcgg
     2821 cactcggaaa taaagccgat atcagtccga taataaaaat gattgaaacc accgccggca
     2881 tataatgcaa tgcaactgtc ggaaaaaggt cgtcaccctt tatggcaacg ttgttcgatg
     2941 cagcaaaaac atacagtaat ccgccgagga acaaaaaaag aaaattcacg ccgacagaga
     3001 ttatgctaaa tgtgaacata tttttttgag aatctttaag cgtgcgcaca ctgatattct
     3061 tttgcatcat ctcctggtct aatccggtca taccgatcgt taaaaaagcg ccgcctaaaa
     3121 tttgcttcat ccaaaatgag ccgcttt
//
LOCUS       DASQJI010000589        25473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1301372,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000589 DASQJI010000000
VERSION     DASQJI010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 25473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25473
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1301372"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2311
                     /locus_tag="VEV83_16000"
     CDS             <1..2311
                     /locus_tag="VEV83_16000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HYK46681.1"
                     /translation="TKQDMIDNATGEVDEVWDNYNSGLITNNERYNGIIDIWSRVDTR
                     LTETLIRELAADKQGFNSVYMMLDSGARGSKTQVKQLVGIRGLMAKPRKSGSSGSEVI
                     ENPILSNFKAGLNVLDYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVITEED
                     CGTLRGIATSALKDNEDVIESLADRIMGRTSLHDVYDPQTDELIIKAGEEISPDVSKQ
                     IDDSGIENVEIRSVLTCESKRGVCVKCYGKNLATGYLAQKGDAVGIIAAQSIGEPGTQ
                     LTLRTFHVGGVAGSASVESSLTAKFDGTIQFDGLRSVPAQNAEGQKIHVVIGRTGEVR
                     IMDMKNDRLLITNNIPYGAVLAVKDGQHVKKGDVICTWDPFNNVVVAEVAGTARFENV
                     IEGITFREESDEQTGHRDKVVIESKDKTKIPSILVEGKDIKTYNLPVGSRLIVEEGDA
                     VTAGEVIVKIPRTLRKSGDITGGLPRVTELFEARNPSNPAVVSEIDGVVAFGNVKRGN
                     REIIVEARDGIVKKYLVPLTRQILVQDGDFVKAGTPMSDGQIAPADILSIKGPFAVQE
                     YVVNEIQEVYRLQGVRINDKHIEVIVRQMMKKVEIVDAGDSKFLEEDLEDRFDFIEEN
                     DRIFEKKVVIDSGDSAKLRSGQIISLRELREENSVLRRADKKLVQVRDAEPSTAKPVL
                     LGITKASLGVQSWISAASFQETTKVLSSAAIQGKSDDMLGLKENVITGHLIPAGTGLR
                     EFENMIVGSKEEYELLATTREAMNFDDEE"
     gene            complement(2394..4154)
                     /locus_tag="VEV83_16005"
     CDS             complement(2394..4154)
                     /locus_tag="VEV83_16005"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK46682.1"
                     /translation="MTLRDPAVLEVLKAKPAITTTPGGKEIPYPYPSPEDWRDEWIYF
                     LLVDRFNNPLAAPKPNEFPCNTYQGGNFAGIKQQLPYLKELGVGAIWISPVLINPQWF
                     TDYWGGYGIFDFTRIEPRFCSDPAAALADRTVADREFRQLVDEAHAEGIYIILDIVLN
                     HAGDLFNYEGIQDTREYREQGVYDIFWRNEAGVPQGDRMQIESVSGLSENEGVWPQEF
                     QHNKFFRRKGGNDTFGDFGRLKELATDQQDEITGRFDVRQNLILAYQYLIAKFDLDGF
                     RIDTLQYIEPEFARVFGNAMREYAQQIGKKNFFTFGEVWQDDDEVRIAEFIGRDTDVD
                     TDFIGVDAAIDFPMRKRLVQVCKGFAPPAILATHFDHRRTILKKIISSHGDAGKFYVT
                     FLDNHDLNERFHQHDFMGQTEIALTCLMTMQGIPCIYYGNEQGLEGSGDRREFVREAL
                     WGRANAFAQDHHLYNHIKDLSALRNMYPALRYGRQYFRQCSGNKSDFGYSPFNGGVIA
                     FSRILNGQELLVVANTNTVDAITVSIVVDQNLHKEGDSMEVVFPFNDVWPLENKCITI
                     GDLRTIRLTIPQGKAFVITG"
     gene            complement(4264..5175)
                     /locus_tag="VEV83_16010"
     CDS             complement(4264..5175)
                     /locus_tag="VEV83_16010"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYK46683.1"
                     /translation="MKKVFVFIFLFAYVLASSQQITCKVVDANSGAALPFATVAFTKT
                     KLFLYTDISGQFSFSKTEELANDTIRVQYLSYGTAIVPVATVTDGFVIRLAAKANLLQ
                     NVTVTACNNPKTVMVNKISGKAKEYIGPGPETRMIIISRFANSKNLSGFVNTIEFYSG
                     SFIEKAQVPVRIHWYTWDDSTNMPDQEITDTSIIVYPYRQGWNKFPVPAKTIYYPNKG
                     LVLGLEFIYPVEYKKQYTSLTTEKERLAWLNDMNHRWKLGMQTTRVEKEGTFFIVNNE
                     GVASYTKKSNYSYLKPAVRITIETCNQ"
     gene            complement(5208..6095)
                     /locus_tag="VEV83_16015"
     CDS             complement(5208..6095)
                     /locus_tag="VEV83_16015"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HYK46684.1"
                     /translation="MLTLWINDLKLIDKVNWLQYSIAPRPIALASTIDAVGNVNLSPF
                     SFFNLFSYNPPLVIFSPSRRGRDNTTKHTLENIYEVPEVAINICDYDMVHQVSLSSTE
                     YPRNTDEFIKAGFTRLPSTVIRPPRVKEAKVQLECKVTEVKSLGETGGAGQLVLAEVI
                     CMHVDESVLNDDRSMIAQTKLHHVARLGGDWYCVVDETNLFRLPKPNRELGIGVDSLP
                     ESIRNSEILTGNELAHLANVKEMPLVDPAFDDEQLRNIIQYFSVDPSEMEKELHRYAK
                     QLLAQNKLHEAWQVLLAGI"
     gene            complement(6105..7121)
                     /locus_tag="VEV83_16020"
     CDS             complement(6105..7121)
                     /locus_tag="VEV83_16020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HYK46685.1"
                     /translation="MKLVSYLNEEHDQLALLENNLLYNTDLLHPELPASMTMFLNYWQ
                     DNYELALNLQQAIIDNLIGKERGRPLEGATILAPVPFPNSCRDGYAFRQHVAAARRNR
                     KVPMIPEFDQYPVFYFANHHSVQGPGPVMCMPDHFEKLDFELEVAIVISKLGRNIPAE
                     EADDYIAGLMIMNDLSARSLQMEEMLLNLGPAKGKDFSTATGPWLVTLDELEPYEIAP
                     REGHTGKNWNLKMKCSVNGVLVSEGNLGDMDWTFAEIIERASYGVTLYPGDIIGSGTV
                     GTGCFLELNGTGKLNDPNYAEQWLKEGDIVEMEVDALGSLSNAIVKEDSDFSILAKKK
                     IAAS"
     gene            7365..8468
                     /locus_tag="VEV83_16025"
     CDS             7365..8468
                     /locus_tag="VEV83_16025"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HYK46686.1"
                     /translation="MTELITKPSFVKHADTELFLQLRQEVNATVKDLEPVRRGDIILK
                     AILFPALYALFYLTALRFALHDSIYYVCYFFMGILVVLNFLNLIHEAVHNTLFRRKRV
                     NNWYVHLLDIMGANSYTWRLRHIRLHHNYPNVMGWDSDFEQSPLARVFPHAPFSKMHK
                     YQHIYLPLVYPLYLLNWLLVRDFRDFFNRKKLVWKVMEKIPAIEYAKLFLFKAIFFFY
                     TIVLPVLLLHISWGQAITGFLIMAFTASIISLLVLLTPHASTESEFPMPDGTGQMPTG
                     WLRHQLNCTNDVSEDNWFIRFFMGCFNYHIAHHLFPSINHVYYPEVTQIIRDFANKHN
                     LPYRQFPLITSLHNHYRLLRSNAFQENIFEETM"
     gene            8471..9289
                     /gene="prmA"
                     /locus_tag="VEV83_16030"
     CDS             8471..9289
                     /gene="prmA"
                     /locus_tag="VEV83_16030"
                     /inference="COORDINATES: protein motif:HMM:NF001785.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006479 - protein methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HYK46687.1"
                     /translation="MQQGHLQYTFYTGEKYLREILIAELAAIGFDGFEEKDDSLLAFI
                     SIEENNDAVEAIIRKYNVAADKTFIAEQNWNELWESNFQPVIINDHVAVRAEFHQPVK
                     NVLHEIIITPKMSFGTGHHATTYMMIEQMCELDFLNKMVFDFGTGTGLLAILAEKLGA
                     TNVIAVDNDERCIENAAENIRQNNCNKIQLALSDKPTDVYKCDMILANINKNIIFENF
                     FSLHEMMQPGAQLLLSGLLTSDEAPILQRAEELKLRVATRQEREGWILLQLSKN"
     gene            9409..10068
                     /gene="plsY"
                     /locus_tag="VEV83_16035"
     CDS             9409..10068
                     /gene="plsY"
                     /locus_tag="VEV83_16035"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HYK46688.1"
                     /translation="MNELLLIIAAYLIGSIPTAVWVSKYYFGIDIRDYGSGNAGATNT
                     YRVLGSRWGTFVMIIDMAKGIIATSLYILLPYYMTNDWDRTNFMIGLGLAAVAGHIFP
                     IWAGFRGGKGVATLFGMILAIQPLVAVCCIGVFLLVLYLTRFVSLSSILSSIAFAVFI
                     LFIFNDDVTLYRIFSVAVALMVILTHQKNINRLLNGTESKVPILKYRDRRRRQRRRRE
                     S"
     gene            complement(10112..11431)
                     /locus_tag="VEV83_16040"
     CDS             complement(10112..11431)
                     /locus_tag="VEV83_16040"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HYK46689.1"
                     /translation="MKVMKFGGTSVGTPQRMNQVLTLITETDGPTIVVLSALSGTTNA
                     LVHISEAISEGYRDVAKRKIDELEQHYRNFVQDLVQTETGRQKAHTIVTEHFEFLNII
                     LRISFSEALNKDILAQGELLSTKLFCVFLEEKSIDHVLLPALEFMSVDTNGEPQIGSI
                     KVKLSQLLEHYQQKKLFVTQGYICRNARGEVDNLKRGGSDYTASLIAAAVTANVCEIW
                     TDISGLHNNDPRMVDKTVPVHHLSFDEAAELAYFGAKILHPACIWPARSYNIPVKLLN
                     TTEPGAPGTTIQQAAMTVGVKAVAAKDGIIAIKIKSSRMLLAYGFLRKVFEVFEKYKT
                     SIDMITTSEVAVSVTIDDPTNLQQIIKELEPLGTVETDTDETIVSIVGNEIAKTSEIL
                     QKIFNAISSVPVRMVSYGGSRHNISLLVPSTYKQQTLQLLNKGVFGL"
     gene            complement(11501..11983)
                     /gene="rnhA"
                     /locus_tag="VEV83_16045"
     CDS             complement(11501..11983)
                     /gene="rnhA"
                     /locus_tag="VEV83_16045"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HYK46690.1"
                     /translation="MTAEKKLIVYTDGAARGNPGPGGYGAILMYGDNVKELSAGYRLT
                     TNNRMELMAVIAALQALKRKNIPLTIYTDSQYVLNSVEKKWLDNWIRTDFKGGKKNKD
                     LWMQYYHLAKDYAINFAWVKGHAENIYNNRCDELATAAADGKNLLIDEGYEKIETKLL
                     "
     gene            complement(11983..12771)
                     /locus_tag="VEV83_16050"
     CDS             complement(11983..12771)
                     /locus_tag="VEV83_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HYK46691.1"
                     /translation="MKLPVYIVDAFTDKLFGGNPAAICPLHEWLPDKLMQSLAAENNL
                     SETAFVIEEDDHYRIRWFTPATEVKLCGHATLASAHIFYTELNHTKSEVWFESLSGLL
                     KVARRDHDTYTLDFPANPPEETHEVPDSIFDGLGTDDGIVFKTSFDYMVVLSNQQLIE
                     NLRPNFASLAKVKARGVVVTARGNEVDFVSRCFYPQSGINEDPVTGSAHTIMVPYWAG
                     ELKKTALRAIQLSKRRGYLECELKNDRVLMSGNAVTYLKGEYIV"
     gene            complement(13040..13477)
                     /locus_tag="VEV83_16055"
     CDS             complement(13040..13477)
                     /locus_tag="VEV83_16055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46692.1"
                     /translation="MYKALIPFYIVCFALYICFTRQPDYLDGEFTNGTVQFAEDSVSK
                     QPIAKASFGVDTIYYLINAAYPLRDLTEGEKVTIIYEAANPQQAAVYRWWGYWIKWDE
                     LLVSILIPVIFLFVANAITGNPTPESLIEQMEAERPPKRRKYD"
     gene            complement(13578..14441)
                     /locus_tag="VEV83_16060"
     CDS             complement(13578..14441)
                     /locus_tag="VEV83_16060"
                     /inference="COORDINATES: protein motif:HMM:NF039345.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6089 family protein"
                     /protein_id="HYK46693.1"
                     /translation="MKTFLRVSVFSMISLCCQAQISIYVAPGLMNYGGDLQPYYWALV
                     QSNLSITTGASVQLTKHLNIRSELTYGKLRAYDKQYSLYPKRNLSFYSHISEINFCIE
                     YDIISSEHKFNPYFFSGAGFYHFNPYTFTETGLKVYLQPLGTEGQGLAEYPDNTPYDL
                     TQANIVFGAGLKYRVSDQWSFALEFNSRYLFTDYLDDVSGFYPKEADLLNHGRSLAAE
                     LSFRGDELDPSLMFPDGKPRGNANATDNYYTSMVRIIYTIPNSSFSIMTGEHRSHGRK
                     RDRSLDCPKKF"
     gene            complement(14463..17981)
                     /gene="smc"
                     /locus_tag="VEV83_16065"
     CDS             complement(14463..17981)
                     /gene="smc"
                     /locus_tag="VEV83_16065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HYK46694.1"
                     /translation="MKLKQLEIKGFKSFADKTILNFDEGITGIIGPNGCGKSNIIDSI
                     RWVIGEQKISQLRSENLEALVFNGSKTRSASGLAEVSLTFENTKNLLPTEFNTVTVTR
                     RFFKNGESEYRLNDVICRLKDIHNLFLDTGVSNDSYAIIELAMVDDIIKDKDNSRRKM
                     LEQAAGITIYKTRKKEAKLKLEATESDLNRIEDLLFEIQNQLKIVEGQAKKAEKYHEI
                     KKEYKEISIELAKAALEGFNITLKEINRRQEEEVDRKHALEAEIATEEAAIEKEKAGF
                     IDQEKALQQQQHAFNDLLQQIRIKENDKNLGVQRLQHLKEKEASLKEFLHKANGQIKT
                     IEHSIRHTELEKTKEEESLGEIKQRLDQARIETDSKRALLDEKRASTDSVRSMHLQTQ
                     RLQFDAEKQVAVADTSVQNLHRSIAQIEQEQQSRIAEVQQLEAELLSQTKKLEEKRQI
                     LQQLKAQHEQTKQRILESQGELEILRNGLTEENRKLDAKRNEHELLRSLVDSMEGYPE
                     SVKFLHNNPRWNIHAPILSDIIYVQEQYRTALENVLLPFLNYYIVNTLDEGLQAVHLL
                     SEVKKGKANFLLLDKIAAINAEAQQPAGTIKALDVIEVDEPYKKLAEYLLGNVFIAEN
                     DEALANASGVVVLEKTGKYVKGKYSLSGGSIGLFEGKRIGRAKNLEKLYEEISAQEKV
                     VSKLKAQIQKKHDEVIGFNEQLKEDLIRDTEAELNRLTNQVFAVQNKIENLQLVRQNA
                     AKQIESMQNRLEQEQQLIDAMGDELTVLNKELNTTTQQIRDAEEAYQSAEKEYNSATE
                     SYNESNLAFARLQSKVAALAQELNFKQTQLKDLHLQVEENSVSLSDVAGQIVQGEAML
                     RSSEEGLHAMLQKKDADEKRLNQADAAYYNYRNALQEKESALRQKIKSRELVDQLLSE
                     IKDELNNLKLNLAGMRERLHVEFKIELDDILDEPRKTTSAVEDLQASADRMRKRLENI
                     GEVNPTAIEAFVEMKKRYEFILEQKNDLTSAKESLLQTIEEVEATANQQFLDTFNKVR
                     ENFQKVFKALFTDEDTADLVLENPENLAETSIDVIAKPKGKKPSSITQLSGGEKTLTA
                     TALLFSIYLIKPAPFCILDEVDAPLDDANVGKFTQMVQQFSDNSQFIIVTHNKMTMNS
                     VDVIYGVTMQEPGVSKLVPVDFRSLN"
     gene            complement(18176..19678)
                     /locus_tag="VEV83_16070"
     CDS             complement(18176..19678)
                     /locus_tag="VEV83_16070"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HYK46695.1"
                     /translation="MYPSYPQQASNLNSVVIKFSEIRFLAIMIVVSGVLYYCLYESTA
                     LPLVLLTFPLVLYDRSFMFPMFLTITLCQGAFNTAQVSGAGPTQDASYAETYAIMAVT
                     PMLLYDLLTQKSKMIPFRFVLYYMIFVLFVIQGAFIYYQHPENYQGLAVVAAKFTPII
                     HSITKAIKICFYVFYLKVLINYPVSQNVKTLEITRRFMPFVIIVIAANLLINGRVQNG
                     AGYSGTLQLGDAHHGSFTSQLCSIGIYLYITIFSRKVNLMTRIFALSALVGIGTTIML
                     MGSRNGLMSFFILFCLGLYINLKGKRIDFQLIILIGAFFAGVITILVSLDSPTVQRAI
                     YMTEVESGGDRVYYWEAGGKAIEKFPIFGLGGDESASQGAVARYAPALVEDKVMHNTY
                     LEMAVEYGLFALIFYLALVFFVLKWGYRLFKFALEKQTVLLAAPAVSYLILMIAAIFI
                     SDIWDTAIWYNMSLVFALSIQLLYYRYISKPKVDTFSSLQQQLAQDHATR"
     gene            complement(19759..21267)
                     /locus_tag="VEV83_16075"
     CDS             complement(19759..21267)
                     /locus_tag="VEV83_16075"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HYK46696.1"
                     /translation="MVKKKVIQSGVWQMLNVSVKVFSQFAYYAVMARLLSKEELGIFA
                     LLNSFINFGNMLGDGGMGDALLQRREFDKQHVNAAFYSSMLLAAILYLGVFLLAPWAA
                     DFYHQPQLTSSLRIFSFIFLFAAMYSASFALLQKKFAFKKIFIADGVMLLLSNVLGIV
                     LAYLGVGVMSLVYSQLFYFGAELLVLLWYQPLPLKFGSTKQHWKDLVGYGSGLTLIRF
                     NTYIVNFGIVLEVGKLVSTAVLGVFDRSFRIMNIPQRFLYDMVQRVMMPALVKKTDTV
                     KGTFGAFNKTLSLIISGLLPLTVFLILFSRQIVLVLLGQKWLDAVPLLQIFFLNLPLR
                     TTASLGDTLMRVHGLIRLNLIRKIQNSVIICVLIYFGYLWNGLTGIGWSIFISTVISY
                     IMMIAIIKNRIFPNDWKKLVFSPYYNGVVLTICWVTPAYLAFLGLHTFIRSELAAFVI
                     VCCMLAAVATWVFLKRPRLLGSDINDIQEDFLQTFQRKKNNKQISIELNAEA"
     gene            complement(21356..23767)
                     /locus_tag="VEV83_16080"
     CDS             complement(21356..23767)
                     /locus_tag="VEV83_16080"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HYK46697.1"
                     /translation="MQDLNNDFTTSNIRPHQDVDIKFLVAKVVGNWYWYVLSVILFLG
                     LGVLIYLYTSPRYTVTGRVLVTGYNSQGKQLTGTDESTVLSDLGLFSIPNSVSNELEI
                     IHSRTLVEKTVHDLQLNVSYWGQGDIRYEEIYKNSPYFIKILWLKNIPEPVEYDVRVI
                     NNKVKFEDEDSDSTFTASFGDTLHFNYGSWVLESNPNVIETNPNHQLGLIINSYNATL
                     YAYMDDIEAMTTNEYVNIIDLSIDGPTPEKNEDMLKHLISLYVQADIADHNRIADSTI
                     AFIDERLIGVSQDLNNIDRNIESFKKENRLTDLSDDAKELVQTTSTVTQTLAQKDVEL
                     KVVEDLEQYLMADQNATRVMPTTAPIQDPAFVQTLDKYNTLQLQRQSYLQNSTEANPA
                     IKNIDIQLRQLRGDLLSMMSTYKKSIATEQADLQTRNSQMFGQISKVPTQERIYLDFT
                     RRQNVMQALYLYLLQTREQTAVSKSNNFGPIRVIDQPTRGPLPYFPNVILIVAAAIFL
                     GLLIPSVSIFLKELLNTRVITSEDITNVSNVPVVATVSHSKSGKPLVVSKDSRHEIAE
                     QFRTLRTNLQFLMPNPSEKVIMTTSSMGGEGKSFVAMNLAYSIAISGKRVLLMELDLR
                     KPRITDTLHVDNHLGFSNYVISEATLNDIFKGSDVHPNFYVMGSGTFVPNPAELLVHE
                     KVADMFVKARNEFDYVVIDCSPVGLVTDALLLSRFADVILYVVRQRFTYKKQVNIIQA
                     LANDRKFKKIDIIFNDVKPIPGYGYGYGYGYSDGYKYGYSYYAGKRSFFQRLFGVNKT
                     KKARA"
     gene            complement(23823..24641)
                     /locus_tag="VEV83_16085"
     CDS             complement(23823..24641)
                     /locus_tag="VEV83_16085"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HYK46698.1"
                     /translation="MFQAATRCLTYCCAILLVINLVSCTPQRIAYFKDIPDSTAANKV
                     LQSIPSGAALVRPDDVLNITIQTLDPQANVILNQGNLPINTGAVSGASGSNVAQAVVA
                     GYLVDRDGFVHLPYVGDILVKGLTSVQVKNLISEKISVYFKDPVVNVRFTNFKITVLG
                     EVRNPTTFLLPNENPTIFDALGLAGDITIYGRRDNVMLVRSDADGKKEIVRLNLDSSS
                     AITSPYFYLKPNDVLIVEPTSERVASASAYRTRDIAVIGAALSLMIVITARLIQ"
     gene            complement(24792..>25473)
                     /locus_tag="VEV83_16090"
     CDS             complement(24792..>25473)
                     /locus_tag="VEV83_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HYK46699.1"
                     /translation="LRISAYLRGDTSFAFTNSYTSYYRLVKSGKEEPLSTHADHYNTN
                     FAYDATYSKGSIFLVQLAYIVGDKNLDNILLEYYNEWKFKHPNPNDFIRVAEKVSGLE
                     LQWYKEYWIYTTRSIDYAIGDINMSGDTTLVTLKRLALMSMPVDVLITYKDSTKEMYY
                     IPMNLMYGAKPPEDKTKRVVETEWKWVDPEYTFRITRSVAEIKSVEIDPSQRMADLNR
                     VNNKITVP"
BASE COUNT         6737 a         5810 c         5549 g         7377 t
ORIGIN      
        1 tacaaaacag gatatgatcg acaatgcaac cggcgaagtt gatgaagttt gggataacta
       61 taattcaggt ttaattacaa ataacgaaag atataatggt atcatcgata tctggagccg
      121 tgttgataca cgtcttacag aaacgctgat acgtgagctg gcagcggata agcagggttt
      181 caattctgtt tacatgatgc ttgactctgg tgcccgcgga tctaagacgc aggtaaaaca
      241 gctcgtcggt atcaggggat tgatggcaaa accaagaaaa agtggttcat ccggatccga
      301 agtaattgaa aacccgatcc tgtccaactt caaagcagga ttgaacgtat tggattactt
      361 catttcaaca cacggtgcga gaaaaggttt ggccgatacc gcattgaaga cagcggatgc
      421 cggttatctc acccgtcgtt tagttgacgt tgcgcaagat gttgtgatca ccgaagagga
      481 ttgcggaaca ctacgcggta ttgcaacttc tgcattgaaa gataacgaag acgtgatcga
      541 atcgctcgct gatcgcatca tgggacgtac ttcattgcac gatgtttacg atcctcaaac
      601 ggatgaattg atcattaaag caggtgaaga aatttcgccg gatgtttcta aacagatcga
      661 tgattccgga attgaaaatg tagaaatacg ctccgtactt acctgcgaaa gcaagcgcgg
      721 ggtctgcgta aaatgttacg gtaaaaattt agctaccgga tacctcgcac aaaaaggaga
      781 cgcggtagga attatagctg cgcagtctat cggcgaaccg ggaacgcagc ttacgttgcg
      841 taccttccac gtgggtggtg ttgcgggatc tgcatctgtt gaatcttcgt tgactgcaaa
      901 gtttgacgga acgatacagt ttgacggttt gcgatcagta cctgctcaaa atgcagaagg
      961 acaaaagata catgtcgtga tcggtcgtac gggtgaggtt cgtatcatgg acatgaaaaa
     1021 tgaccgcctg cttatcacta acaacatccc ttatggtgca gttctcgcag taaaggacgg
     1081 acagcacgtg aagaaaggcg atgtgatctg tacgtgggat ccgttcaaca atgtagttgt
     1141 ggcagaggta gcaggtacag cgcggttcga aaatgttatt gaggggatta cgttccgtga
     1201 agagtctgat gaacaaaccg gccaccgtga caaagtggtt attgaatcaa aagataaaac
     1261 aaagattcct tccatcctgg tagagggaaa agatataaaa acttacaacc tgcctgttgg
     1321 aagccgcctc attgttgaag aaggcgatgc ggtgacagca ggggaagtga tcgtgaaaat
     1381 tccaaggacg ctgcgtaagt caggagacat cacgggaggt ctgccacgcg taacagagct
     1441 tttcgaagca agaaatccga gtaacccggc cgtcgtttca gaaatagacg gtgtggttgc
     1501 gttcggaaac gtgaagcgtg gtaacaggga aataattgtt gaagcaagag acggcattgt
     1561 caagaaatat ctcgttcctc ttacaaggca gatccttgta caggacggcg actttgtaaa
     1621 agccggaact ccaatgagcg acggccaaat tgcgcctgcc gacattctgt ctattaaagg
     1681 acctttcgcg gttcaggaat atgtggtaaa tgaaatacag gaagtatatc gcttacaagg
     1741 tgtgcgtatc aatgataagc acatcgaggt tatcgtgcgt caaatgatga aaaaagtaga
     1801 aatcgtagat gccggcgata gtaagttcct cgaagaagac ctcgaggaca ggtttgattt
     1861 catcgaagaa aatgaccgca tctttgaaaa gaaagtggtg atcgactccg gtgatagtgc
     1921 gaaacttcgt tcgggccaga tcatttcttt gcgcgaatta agagaagaga attccgttct
     1981 tcgtcgtgcg gataagaaac ttgtacaggt gagagatgca gaaccatcaa ccgcgaagcc
     2041 ggtgttgctg ggtattacga aagcttcact tggcgttcaa agctggatct ctgctgcatc
     2101 attccaggaa acgacaaagg tgttgagttc tgcagcaatc cagggtaaga gcgatgatat
     2161 gcttggattg aaagagaacg tgataaccgg gcatcttatt ccggctggta cgggcttacg
     2221 cgaatttgag aatatgatcg tgggcagtaa agaagaatat gaattgctgg caactacccg
     2281 cgaagcgatg aactttgacg atgaagaata ggagtaacaa tattcgataa aaaaagcagg
     2341 aggagcgttc ttcctgcttt tttgtttctg gtggttcgtt gctaacttaa aaactaccct
     2401 gtgatcacaa atgcttttcc ctgcggtata gttaaacgga tggtgcgaag atctccaatt
     2461 gtaatgcact tgttctctag cggccacaca tcattgaacg ggaaaacaac ctccatgctg
     2521 tcaccctcct tgtgcaaatt ctgatctacc acaatcgaaa cagttatggc atcgacagtg
     2581 tttgtgttgg ctactaccaa aagttcctgg ccgtttagga tccttgaaaa cgcgatcacg
     2641 ccaccgttga acggtgagta tccaaaatcc gatttgttcc cgctgcattg cctgaaatat
     2701 tgcctgccat aacgcaacgc aggatacata ttccgcagcg cactgagatc tttgatatgg
     2761 ttgtataaat gatgatcctg cgcgaacgca ttcgcccgtc cccacagcgc ctcacgtaca
     2821 aattcgcgcc ggtcgccact tccttcaaga ccttgttcat tgccataata tatgcatgga
     2881 atgccctgca tggtcatcag gcacgtgagc gcgatttccg tttgacccat gaaatcgtgt
     2941 tgatgaaaac gttcattcag atcatgatta tctaaaaatg taacgtagaa ctttccggcg
     3001 tcaccgtgcg agctgattat cttttttaag atcgtcctgc ggtgatcgaa atgcgtggcg
     3061 agaattgccg gcggcgcgaa gcctttgcaa acctgtacaa gccgtttgcg cattggaaaa
     3121 tctatcgcag catcaacccc gataaaatca gtatcgacgt cagtatcccg ccctataaac
     3181 tctgcgatcc tcacctcatc atcgtcctgc caaacttcgc caaatgtgaa aaaatttttc
     3241 ttccctattt gctgcgcata ttcacgcatt gcattgccga acacacgtgc gaattccggt
     3301 tctatatact gaagtgtatc tatccggaat ccgtcaaggt cgaattttgc gataagatac
     3361 tgataggcca gaattaagtt ttgtcgcaca tcaaatctac cggtaatctc atcctgctga
     3421 tccgttgcca gttctttcaa tcttccaaag tcgccgaacg tatcgttccc acctttgcgc
     3481 cgaaagaatt tgttgtgctg aaattcctgt ggccacacac cttcattttc acttagaccc
     3541 gaaacagatt cgatctgcat gcggtctcct tgcggaacgc cggcttcatt ccgccagaag
     3601 atatcataca caccttgttc acggtattct cttgtgtcct gtattccttc atagttaaac
     3661 agatcgcctg catgattgag tacgatatcg agtatgatgt atattccttc cgcatgcgct
     3721 tcatcaacca gttgcctgaa ttcacgatca gccacagtgc ggtctgcgag cgctgcggca
     3781 ggatcgctgc agaaccgcgg ttcgatgcgt gtgaaatcaa aaatgccata accaccccaa
     3841 tagtcggtga accattgcgg gttgatcagc accggcgaga tccaaatggc cccgacgcca
     3901 agctctttca gataaggtaa ctgttgcttt atgcccgcaa agtttccacc ctggtatgtg
     3961 ttacagggaa attcgtttgg cttcggcgca gcaagaggat tattaaaacg atcgaccagc
     4021 aaaaaataga tccattcatc tctccaatct tcgggcgaag gatatggata tggaatttct
     4081 ttaccgccag gcgttgttgt gatcgcaggt tttgctttca gtacttcaag taccgctgga
     4141 tctcttagtg tcatgaggtt ggcgttttaa atcaaacaaa aaataagaaa taaaagcagc
     4201 aacgggaaaa tttatttgtt tgctacacaa acacagcaaa gcatgagagg gacgaataca
     4261 tggttattgg ttgcaggttt cgatcgtaat tcgaacggcc ggtttcaaat aactatagtt
     4321 gctttttttt gtataagaag ccacgccttc attattaacg ataaagaatg ttccttcttt
     4381 ctcaacgcgc gtcgtttgca taccgagttt ccaccggtga ttcatatcat taagccaggc
     4441 gagtctttct ttttcagtgg ttagcgaggt gtattgtttt ttatattcca ctggataaat
     4501 aaattcaagg ccaagcacta aacctttatt cgggtaatat attgttttgg caggaactgg
     4561 aaatttgttc cagccctggc gataaggata tacaataata cttgtatcgg ttatttcctg
     4621 gtcgggcata ttggtcgaat catcccacgt ataccaatgt attcgcaccg gcacctgggc
     4681 tttttcaata aaactgcctg aataaaattc gatcgtgtta acgaagccag ataagttctt
     4741 tgaatttgca aaccggctga tgatgatcat ccgcgtttca ggaccgggac caatatactc
     4801 tttcgcctta ccggaaatct tattcaccat tacagttttc gggttattgc atgcggtgac
     4861 cgttacattc tgcagcaaat ttgctttagc tgcaaggcga ataacaaaac catctgtaac
     4921 ggtcgccacc ggaacgatgg cagtaccata agaaagatat tgtaccctga tagtgtcatt
     4981 agcgagttct tcggttttcg aaaaggaaaa ttgcccggag atatccgtgt acaagaataa
     5041 tttggtctta gtaaatgcga cggtagcgaa cggtaaagct gctcctgaat ttgcatcaac
     5101 cactttgcat gtgatctgtt gagaagaagc aagaacgtat gcaaaaagga aaatgaagac
     5161 aaacaccttt ttcatcgttc gcaaatgtca attatatttt tcgaagttta gatgccggca
     5221 agcagtacct gccatgcttc atgcagttta ttttgtgcaa gcagttgttt agcgtaccga
     5281 tgtagttctt tttccatttc agatggatca accgaaaaat attgaatgat gttcctgagt
     5341 tgctcgtcgt caaaagcagg atctaccagc ggcatctctt taacgttggc gaggtgcgcc
     5401 aattcattac cggttagtat ttcgctgttg cggatacttt ccggtaaact gtcaacgcct
     5461 atacctaact ccctatttgg tttaggtagc ctgaaaagat ttgtttcatc caccacgcaa
     5521 taccaatctc ctccaagacg cgccacatga tgcagctttg tttgtgcgat catggatctg
     5581 tcatcattca ggacgctctc atcaacatgc atgcatatta cttctgcaag caccagttgc
     5641 cctgcgcctc ccgtctcacc aaggcttttt acttccgtta ccttacactc cagttgcacc
     5701 ttcgcctctt tcacgcgcgg aggccttata acggttgacg gtaatctcgt aaatcctgct
     5761 ttgatgaatt catccgtgtt cctcggatat tcagtgctcg acaaacttac ctggtgtacc
     5821 atgtcgtaat cgcaaatgtt gatagccact tctggtactt cgtaaatatt ttcaagcgtg
     5881 tgtttggttg tattatcccg gcctcttctc gacggagaaa agatcacgag cggcgggtta
     5941 tatgaaaaaa gattgaaaaa actaaatggg ctgaggttca cgttgccaac tgcatctata
     6001 gtgcttgcca atgctatagg ccttggggca atggaatatt gtaaccaatt tactttgtcg
     6061 attagcttaa gatcgtttat ccagagtgta agcacaatca gtaattatga agccgcaatt
     6121 tttttcttcg ccaatatcga aaaatcgctg tcttctttta cgatagcatt tgagagagaa
     6181 cccagcgcat ctacttccat ttcgacgatg tcaccttctt tcagccattg ctcagcgtaa
     6241 ttcgggtcgt tcagtttacc ggtgccattt aattctagaa aacatccggt gcccactgta
     6301 ccgctgccga taatatcacc cggatacagt gttaccccat aggaagcacg ttcaatgatc
     6361 tctgcgaagg tccagtccat atcgccaagg tttccttcac taactaacac accgttgacg
     6421 gagcatttca tttttaagtt ccagttctta cctgtatgtc cttcgcgcgg cgctatttca
     6481 tacggttcca attcgtcaag cgtgaccaac cacggaccgg ttgccgtcga aaaatctttt
     6541 ccctttgcag gccccaggtt taagagcatc tcttccattt gcaaactgcg tgcactaaga
     6601 tcattcatga tcattaagcc cgctatgtag tcgtcggcct cttctgcagg aatattcctg
     6661 ccaagctttg agatcacgat cgcaacctcc agttcaaaat ccaacttttc aaaatggtcg
     6721 ggcatgcaca taactggccc gggaccttga acgctgtgat gatttgcaaa ataaaaaacg
     6781 ggatactgat caaactcggg tatcatggga actttccggt ttctgcgcgc agcagccacg
     6841 tgttgacgaa atgcatagcc gtcacggcaa ctgtttggaa aaggcaccgg ggccaatata
     6901 gtcgcgccct ccaatgggcg gcccctttct ttcccgatca aattgtcgat gatcgcctgc
     6961 tgcaggttca gggcaagttc ataattgtcc tgccagtaat tgagaaacat ggtcatcgaa
     7021 gcgggcaact ccgggtggag aaggtccgta ttgtacagca aattattttc aagcaatgca
     7081 agttgatcat gttcctcatt caggtatgag acgagtttca tatatccaag ttaatacgtg
     7141 ggtaattttg tcgcgcataa aaacgccagc aatcattgca ttatttatgt gcacgccatc
     7201 tgcaatttta tgcaataata gtttgccaac aacgcagtta tatatgcttc tgtataaaat
     7261 cttcaggcaa aaattatctt ccaaaaaaaa tagatactaa ttttacgttc agaaaacctt
     7321 cggcgggttg ccgtatcgcc accggcgatg aaaaacggac atttatgacc gagctgataa
     7381 cgaaaccatc tttcgtcaaa catgcagaca ctgaattgtt cttgcagcta agacaggaag
     7441 taaacgccac cgttaaggat ttggaacctg taagaagagg cgacatcatc ttaaaggcta
     7501 tcctgtttcc tgctctgtat gccctgtttt atcttactgc gcttagattc gcgctacatg
     7561 attcgatata ttacgtctgc tactttttca tgggtatttt ggttgttctg aactttctga
     7621 atcttatcca tgaagcggtt cataataccc ttttccggag aaaacgcgtt aataactggt
     7681 atgtgcatct gctcgacata atgggcgcca acagttatac ctggagatta cgtcacattc
     7741 gactgcatca taattatcca aacgtgatgg gctgggatag cgattttgag caaagcccgc
     7801 tcgcaagggt gtttccgcat gctcctttct ctaagatgca caagtaccag cacatttatt
     7861 tgcctttggt ctacccatta tatttattaa actggttgct ggtaagagat ttcagggatt
     7921 ttttcaaccg gaagaaattg gtgtggaagg tgatggaaaa aattcccgct attgaatatg
     7981 caaaattgtt tctgttcaaa gcaatttttt tcttctatac aatagttctg ccggtgcttt
     8041 tattgcacat cagttggggc caggcgatca ctggttttct tatcatggcc tttactgcca
     8101 gcatcatttc gttactcgtt ctattaacgc cgcacgcgag tacggaaagt gagttcccaa
     8161 tgccggatgg cactggccaa atgcctacag ggtggttgcg tcaccaactc aactgcacca
     8221 acgatgtgtc ggaagacaac tggttcatca ggttttttat gggatgcttc aattatcata
     8281 tcgcccatca tttgttccca tccataaatc atgtttatta ccccgaagtc acccaaatta
     8341 tccgcgactt tgccaacaaa cacaatctgc cgtacaggca atttccgcta attacctcgc
     8401 tccacaatca ttatcgactc ttgcgttcaa atgcattcca ggaaaatatc tttgaagaaa
     8461 ccatgtagcc gtgcagcagg gtcatcttca gtatactttt tacacaggcg aaaaatatct
     8521 ccgggaaatt ttgatcgcgg aacttgccgc tataggtttt gatggatttg aagaaaagga
     8581 tgattcgtta ctcgcattca tttctatcga agaaaataac gatgccgttg aggcgatcat
     8641 ccgaaaatat aacgtcgctg ccgataaaac atttattgca gaacagaact ggaacgagtt
     8701 atgggagtca aattttcaac cggtgatcat caacgatcat gttgcggtaa gagcagaatt
     8761 ccatcagccg gtaaaaaacg tgctgcacga gatcatcata acaccgaaaa tgagttttgg
     8821 caccgggcat catgcgacca cttatatgat gatcgaacaa atgtgcgaac tcgactttct
     8881 taataaaatg gtatttgatt ttgggacagg aaccggtttg cttgcaatac tcgctgaaaa
     8941 actaggtgcc acaaatgtta tcgcggtcga taatgatgaa cgctgcattg aaaatgctgc
     9001 agaaaatata aggcaaaata attgcaacaa aattcagctt gcgttgtctg acaaaccaac
     9061 tgatgtttac aagtgtgata tgatcctcgc aaacattaac aagaacataa tttttgaaaa
     9121 ttttttttca ttgcatgaga tgatgcaacc gggcgcgcaa ctccttctta gcgggttact
     9181 taccagcgat gaagcaccta tattacagcg ggcagaagag ctgaaattga gagtcgcaac
     9241 ccgacaagaa cgggagggtt ggattttgct acaactgtct aaaaattagc caattaaaca
     9301 tcatttgtgt ggcaacctcc ggcgccagat ggtatttttt attttaaatg atttttttaa
     9361 ttcattgggc ttatatttgt cgtcctactt taaccatgtt ggctcccaat gaacgaacta
     9421 ttattgataa tagcagctta tctcattggt tctattccta cagcagtttg ggttagtaaa
     9481 tactacttcg gaatcgatat tcgggactat ggcagcggca acgccggcgc gacgaatacc
     9541 tatcgtgttc ttggttcgcg ctggggcacg ttcgtgatga tcatcgacat ggcgaaaggc
     9601 ataattgcaa catcgctgta tatacttctt ccatactaca tgacgaatga ctgggaccgc
     9661 acaaatttta tgataggcct ggggcttgca gcagtggccg gccacatctt tccgatatgg
     9721 gcagggtttc gcgggggaaa aggagttgcc actttatttg gtatgatcct cgccatccag
     9781 ccacttgtcg cagtgtgttg catcggagtg tttctattgg tattgtactt aacccgtttt
     9841 gtttcattaa gctccatact ttccagcatt gcgttcgcgg ttttcatcct ctttatcttt
     9901 aacgacgacg ttactttata cagaattttt tctgtggcag tggcattgat ggtgatactc
     9961 acacaccaaa aaaatattaa tcgcctgctt aatggaactg aaagtaaagt tcccatcctt
    10021 aaatatcgcg acaggcgaag aaggcaaagg agaagacgcg aatcgtaaag tgaaggtcaa
    10081 taaaaagcgc tctcagattt cacttctcac atcataatcc aaacacccct ttattcaata
    10141 attgaagcgt ttgttgttta tacgtcgagg gtacaagcag cgaaatgtta tgacggcttc
    10201 ctccgtagct gaccatccgt acaggcacgg aactgatcgc attgaatatt ttttgaagga
    10261 tctccgaggt tttggcgatc tcgttaccaa cgatcgatac aatggtttcg tcagtatcag
    10321 tttcaaccgt tcccaaaggt tccaattctt tgatgatctg ctgaaggttt gtaggatcat
    10381 cgatcgtcac agaaaccgcc acttccgacg tagtgatcat gtcaatggaa gttttgtatt
    10441 tttcgaacac ttcaaagacc ttcctcaaaa aaccgtacgc aagtaacata cggctgctct
    10501 tgatcttgat cgcgatgatg ccatcctttg ccgccaccgc cttcacgccc acagtcatcg
    10561 cagcctgctg aatggttgta cctggcgctc cgggttctgt tgtattcaga agttttacgg
    10621 ggatgttgta tgaacgagca ggccaaatgc atgccgggtg aaggatcttc gcgccaaaat
    10681 aagcaagctc cgcagcttca tcgaaactga ggtgatgcac cggaactgtt ttatcaacca
    10741 tacgcgggtc attgttgtgc aaaccactga tgtcggtcca tatctcgcac acgtttgcag
    10801 taactgcggc cgcaataagc gatgcggtgt aatcgctccc gccacgtttt agattgtcaa
    10861 cttcaccacg tgcattgcgg catatgtagc cctgcgttac aaataatttt ttttgctggt
    10921 aatgctcgag caactggctg agtttcactt ttatgcttcc gatctgtggt tcgccgttcg
    10981 tatcaacgct catgaactcg agtgctggca gcagaacatg gtcaattgac ttttcttcaa
    11041 gaaaaacgca aaataatttt gtacttaata attcgccctg tgcgagaatg tctttattca
    11101 acgcttcact gaatgatatc ctaagaatta tgttcagaaa ttcaaaatgc tcggttacga
    11161 tggtatgcgc tttttgcctg cctgtttccg tttgaacgag gtcttgcaca aagttcctgt
    11221 agtgctgttc aagttcatcg atctttcgtt ttgcaacatc acgatagcct tccgaaattg
    11281 cttcgctgat gtgcacaagc gcatttgttg ttccgctgag ggcgctcaac accacgatcg
    11341 tcggtccatc cgtttcggtg atcaaggtaa gcacctggtt catgcgttgc ggcgtgccaa
    11401 cactggtgcc gccaaacttc attactttca taatcattcc tgtgtcttcg tctttcgaag
    11461 aggttcgttt aaaaagtggg caaaaatagg agtattattt ttagagcagt ttggtttcaa
    11521 ttttttcata gccttcgtcg attaataaat tcttgccatc ggctgctgcg gttgcaagtt
    11581 cgtcgcagcg gttgttgtag atgttttcag cgtgtccctt tacccaggca aagtttattg
    11641 cgtaatcttt agcgaggtga taatactgca tccaaagatc cttgtttttc ttgccgccct
    11701 taaaatcagt gcggatccag ttatcgagcc attttttttc aacagaattc aaaacgtact
    11761 ggctatcggt atagatcgtt aacggaatgt tctttctttt gagcgcttgc aatgcggcta
    11821 tcaccgccat caattccatc cggttgttag tggtcaaccg gtagccggca gaaagctctt
    11881 tcacgttatc gccatacatt aatattgcgc cataaccgcc ggggccgggg ttgccgcggg
    11941 ctgcgccgtc cgtatagacg ataagttttt tttccgctgt catcaaacga tatattcgcc
    12001 ttttaggtag gtgacggcat tgccgctcat gagcacgcgg tcatttttta attcacattc
    12061 aaggtaaccc cgccgtttgg aaagctggat agctctgagc gccgtcttct tcaactcgcc
    12121 tgcccagtaa ggtaccatga tggtatgtgc cgaccccgtg accggatctt cattgatccc
    12181 gctctgcggg tagaaacacc tggaaacaaa atcaacttcg tttccgcgtg ccgtgactac
    12241 tacgcctctt gccttaacct ttgccaggga ggcaaaattc ggcctaagat tttcaatcag
    12301 ctgctggttg gaaagaacaa ccatgtagtc gaaggacgtt ttaaacacga tcccgtcatc
    12361 tgtgccaagc ccatcaaata tgctgtccgg cacttcgtgg gtttcttcag gcgggttcgc
    12421 aggaaagtct aatgtatatg tatcgtggtc ccttcttgca accttcagta acccgctcaa
    12481 cgattcaaac caaacctcgc tttttgtatg gttgagttcc gtataaaaaa tgtgagcact
    12541 cgccagcgtc gcatggccac aaagctttac ttctgtggcc ggagtgaacc aacggatgcg
    12601 gtaatggtcg tcttcttcaa taacaaatgc tgtttccgac aaattatttt ccgcagccag
    12661 gctttgcatc agtttatcgg gaagccattc atgcaacggg caaatcgccg cagggttgcc
    12721 accaaaaagc ttatcggtaa acgcatctac tatataaaca ggcagtttca ttgatcaaat
    12781 ctttacgagc aaagttgcga tcttaaactt caacggcaaa aaagcaaccg caaatgctaa
    12841 cgaatcgtta atggattgaa tcttcaaaaa atttttttaa accgattaaa ccgcgaaaaa
    12901 tgtattcagt ctattgttca ctaaagcgat tagatagctt aaaaatattt gaacttttgc
    12961 agcagggtta aatcagggtg gccagcggga tgcggtcacc ctcttttttt gtttagaacg
    13021 aacgaaaaat aaatttccct caatcgtatt ttcttctctt cggaggtctc tccgcttcca
    13081 tctgttcgat taaagattca ggtgttggat tgccggtgat ggcatttgcg acaaacagaa
    13141 aaatgaccgg gatgagaatg gaaacaagaa gttcatccca ttttatccaa taaccccacc
    13201 acctatatac ggcagcctgt tgcgggtttg cagcttcata gatgatagtt accttttcgc
    13261 cctctgtgag atcgcgtagc gggtacgctg catttatcag ataatatatc gtatcaacgc
    13321 cgaaacttgc ttttgcgatc ggttgttttg acacactgtc ttcggcaaat tggacggttc
    13381 cgtttgtaaa ctcaccgtca agataatcgg gttgccgcgt gaaacaaatg taaagggcaa
    13441 agcagacaat atagaaaggg atgagcgctt tatacaatgt aataatttgg cgcaaatgta
    13501 actcccgcga ggttccgttt caatgaccgt gttaccacaa acgcgctgct cttaattttc
    13561 attgccaccg tatgacctta gaattttttt ggacaatcga gagaacggtc tctctttctg
    13621 ccgtgcgagc ggtgttcgcc agtcattata ctaaaagagc tgttcggaat tgtatagatt
    13681 attcgcacca tggacgtata gtagttatcg gttgcatttg catttccccg gggtttgcca
    13741 tccgggaaca ttaacgacgg gtcgagttca tcacccctaa acgaaagctc ggcagccagt
    13801 gagcggccat gatttagaag atcggcttct tttggataaa atccgcttac gtcgtccagg
    13861 tagtcggtga acaaataccg tgaattaaat tcgagtgcga agctccattg atccgagacc
    13921 ctgtatttca ggccggcgcc aaatactata ttggcctgcg taagatcgta gggtgtgtta
    13981 tcaggatatt ctgccaaacc ctggccttcg gtacccagcg gttgcaaata cactttcaac
    14041 ccggtttcgg tgaacgtgta tggattaaaa tgataaaagc cggcaccgga aaaaaagtat
    14101 ggattgaact tatgctcgct gctgatgata tcgtattcaa tgcaaaaatt tatttcgctg
    14161 atatggctgt agaagctcag atttcttttt ggatacagtg aatactgctt atcatacgca
    14221 cgtagtttac cgtaagtaag ctcactcctt atattaaggt gtttcgtcaa ttgcacactt
    14281 gcaccggtag tgatggaaag atttgactga acaagcgccc aataatatgg ctgcagatca
    14341 ccgccataat tcatcagccc cggcgcaaca taaatactta tttgcgcctg gcaacatagc
    14401 gagatcatag aaaatacgct gacgcgtaag aatgtcttca taaacgtatc aggggatgaa
    14461 atctaattca agctcctgaa atcaacggga acaagcttgc ttacccccgg ttcctgcatg
    14521 gttactccat agatcacgtc aacgctgttc atggtcattt tgttgtgcgt aacaatgatg
    14581 aactgtgaat tgtcgctgaa ctgttgcacc atttgtgtga atttaccaac gttggcgtcg
    14641 tccagaggcg catctacttc atcgagtata cagaacggcg ccggcttgat caggtatatc
    14701 gaaaacaata aagcagttgc cgtcagcgtc ttttcgcctc cacttaactg cgttattgat
    14761 gacggctttt tgcctttagg ttttgcaatg acatcaatgc ttgtttctgc aagattttcc
    14821 ggattctcca gcacaaggtc ggcagtgtcc tcgtcggtga acaatgcttt gaagactttc
    14881 tgaaaatttt ctctcacctt gttgaatgtg tcaaggaact gctgattagc ggtagcttcc
    14941 acttcctcaa ttgtctgcaa caaactttct ttcgcagagg tgagatcatt tttttgctcg
    15001 agtataaatt cgtagcgctt cttcatttcg acaaatgcct cgattgcagt tggattcact
    15061 tcgccgatat tctcgaggcg cttgcgcatt cggtcggcag aagcctggag gtcttcaaca
    15121 gccgaagttg ttttgcgcgg ctcatcaagt atatcatcaa gctcaatttt aaattcaacg
    15181 tgcaaacgtt cacgcatgcc cgcaagattc agtttaagat tattgagctc gtctttgatc
    15241 tccgaaagaa gctgatccac cagctcgcga ctctttattt tttgtcgaag tgcggattcc
    15301 ttttcctgta atgcgttgcg ataattgtaa tatgctgcgt ctgcctggtt cagccttttt
    15361 tcatccgcat ctttcttttg caacattgca tgtaacccct cctcggagga tctcagcatg
    15421 gcttcccctt ggacgatttg cccagccacg tccgacagcg atacggaatt ctcttcgacc
    15481 tgcagatgaa gatcttttaa ttgcgtctgc ttaaaattca gttcctgtgc caacgctgca
    15541 actttgcttt gcagccttgc aaacgcgagg ttgctttcat tgtatgattc agtcgcacta
    15601 ttgtattctt tttctgctga ttgataagct tcttcggcgt ccctaatttg ttgggtggta
    15661 gtattcaatt ctttgttcaa tacagttagt tcatcgccca tggcgtcgat cagttgctgc
    15721 tcctgctcca atcgattttg cattgactca atttgctttg ccgcattttg acgaaccaac
    15781 tgcaggttct cgatcttatt ttgcactgca aacacctggt tggtgagacg attcaattct
    15841 gcttcggtgt cacggatgag atcttccttc aattgctcgt tgaagccaat cacttcatcg
    15901 tgtttctttt gtatctgcgc ttttagcttg ctcactactt tttcctgcgc ggaaatctct
    15961 tcatacaatt tttcaaggtt ctttgcgcgc cctatcctct ttccttcaaa aagtcctatg
    16021 ctgcctccgc tcaggctgta tttgcctttt acatatttgc ccgttttttc caatacaaca
    16081 acgccactcg cgtttgcaag cgcttcatca ttctctgcga taaaaacatt cccgagtaag
    16141 tattcagcca actttttgta cggctcgtcg acctcaatta catcaagcgc tttgatggtt
    16201 cccgctggtt gttgcgcttc tgcattgatc gctgcaattt tatcaagcag tagaaaattc
    16261 gctttcccct tcttcacttc actcaacaaa tgaacagctt gcaatccttc gtccaacgtg
    16321 tttacgatgt agtaattgag gaaaggcaac aagacatttt ccaacgccgt acggtattgc
    16381 tcctgcacat aaatgatatc cgaaagaatt ggcgcatgta tattccaccg cggattattg
    16441 tgcagaaact ttacgctctc cgggtatccc tccatagaat ctacaaggct cctcaacagt
    16501 tcgtgttcgt ttcgttttgc gtcaagcttc ctgttttctt ctgtaagtcc atttctcaaa
    16561 atttccagct cgccctgcga ttctaaaatg cgctgctttg tttgttcatg ctgcgctttt
    16621 aattgttgca gtatttgccg tttctcttct aatttttttg tttgcgataa aagttcagct
    16681 tccagttgct gcacctcggc tattctgctt tgttgttcct gctcgatctg cgctatgctc
    16741 ctgtgaaggt tttggactga tgtatccgcg actgcaactt gtttttccgc gtcaaactga
    16801 aggcgctgcg tttgcagatg catactgcga acgctgtcag ttgatgcccg cttttcatcc
    16861 aatagtgccc gcttggaatc tgtctcaatt cgtgcctggt cgagtcgttg tttaatttct
    16921 ccaagagatt cttcttcttt tgttttttct aactcagtat gccggatcga atgctcgatc
    16981 gtttttattt gcccatttgc tttatgtaaa aactctttaa gagacgcttc cttttctttc
    17041 aaatgttgta aacgttgtac accgagattt ttatcgttct cttttatacg gatctgttgc
    17101 aacagatcat taaatgcatg ctgctgttgc tgcaatgctt tttcctggtc gatgaagccg
    17161 gctttttctt tttcgatcgc tgcttcttcc gtagcgatct ccgcttccag tgcgtgtttt
    17221 ctgtcaacct cctcttcctg ccgcctattt atttctttca aagtgatatt aaatccttcg
    17281 agtgccgcct tcgctaactc gatcgatatt tccttatatt ctttttttat ttcgtgatat
    17341 ttctctgctt tttttgcctg gccctccaca attttcagtt ggttctgaat ttcaaataag
    17401 aggtcttcga tgcggtttag atcactttct gtggcctcaa gcttaagctt cgcttccttt
    17461 ttcctggtct tgtaaatcgt gatgccggca gcctgctcaa gcatcttgcg acggctgttg
    17521 tctttgtcct taatgatatc atccaccatt gcgagctcaa tgatcgcata gctgtcgttg
    17581 cttacgccgg tgtcgaggaa aagattatga atgtccttca gcctgcatat cacgtcattc
    17641 agccggtatt cactttcacc atttttgaag aatcggcgtg taaccgtaac cgtgttgaat
    17701 tctgtcggca acaggttctt cgtgttttcg aatgtgaggc ttacctcggc aagtccgctg
    17761 gcgcttcttg tctttgaacc gttgaatacc aatgcctcga ggttttcgct ccggagttgc
    17821 gatatttttt gttcgccgat cacccagcga atagaatcaa taatgttgct ttttccgcaa
    17881 ccgtttgggc cgatgatgcc agtaatacct tcgtcaaaat tcaaaatggt cttatcagca
    17941 aagcttttaa aaccttttat ttcaagctgc ttgagtttca taacacaccg ttgaaagttt
    18001 tagaagataa tattttaata aaacgttctt tttagcgcaa tcttatgcgg gatgatctta
    18061 ttgcgaacat aagctaaata gtaaagggca gcattcccgc ggaaatacgt gtggagaatt
    18121 ggtggaaact gattactcgt tcagatttcg taacctggcc gttgtgcttt tgagatcatc
    18181 ttgttgcatg atcctgcgca agttgctgtt gcaacgacga gaatgtatca actttcggct
    18241 tgctgatgta ccggtaatac aatagttgta tcgataatgc aaaaacaagg ctcatgttgt
    18301 accagatagc tgtatcccaa atatcactga tgaatatggc ggcgatcata aggatgagat
    18361 aacttactgc cggggcagcc aataacacgg tctgtttttc caacgcaaac ttaaacaacc
    18421 ggtatcccca tttcagaaca aaaaacacga gcgccagata aaatatcaaa gcgaaaagtc
    18481 cgtattcaac tgccatctcg aggtaagtgt tgtgcatgac cttatcctca accagggcag
    18541 gagcatatcg ggccacggcg ccttgcgacg ctgattcatc gccgccgaga ccaaaaattg
    18601 gaaatttctc aatggctttc ccacccgctt cccaataata aacacgatcg ccaccgcttt
    18661 caacttccgt catatagatc gctcgctgaa cagtgggtga atccagggaa actaaaatgg
    18721 ttatgactcc agcgaaaaac gcaccgataa ggatgatcaa ctgaaagtcg atccttttgc
    18781 cctttaaatt gatgtataat ccaaggcaga aaagaataaa gaatgacatt agaccatttc
    18841 tcgatcccat aagcatgatc gtcgtcccga tgccgacaag cgcgctcagc gcaaaaattc
    18901 tggtcattaa attcaccttc cggctaaata tggtgatgta cagataaatc ccgatggaac
    18961 ataattgcga agtaaaactg ccatgatgtg cgtcacccag ttgtagtgtg ccactgtaac
    19021 ctgcgccgtt ttgcacgcgc ccgtttatca aaagattcgc agcgataaca atgatcacaa
    19081 aaggcatgaa ccgccttgtt atttccagcg tttttacgtt ttgagaaacc gggtagttga
    19141 tcagcacctt aagataaaaa acataaaagc aaattttgat agccttagtt atgctgtgaa
    19201 ttatgggtgt gaatttcgcg gcaactaccg ctagtccctg gtagttttcc ggatgctgat
    19261 aataaataaa tgcaccctgg ataacgaaca aaacaaatat catgtaatac aaaacgaacc
    19321 tgaaggggat cattttgctt ttttgcgtaa gcaggtcata taaaagcatg ggggtaacgg
    19381 ccatgatagc atacgtctct gcatacgaag catcttgtgt tggacctgct cctgagacct
    19441 gcgctgtatt aaatgctccc tggcaaagcg tgatggtgag aaacattggg aacataaatg
    19501 aacgatcata tagcacaagc ggaaacgtaa gaagcactaa tggcagtgcg gtagactcat
    19561 acaggcaata gtagagaaca ccacttacga ctatcataat agcgagaaat cttatttccg
    19621 aaaatttgat aacaacggaa ttcaaattgc tcgcctgctg tgggtatgaa ggatacataa
    19681 agttttaccg gtggctattc acaaagttat ttaaaacggt ttgctgccgc tgattttatg
    19741 actaatcatt ttcgtgtact atgcctctgc atttaactca attgaaattt gtttattatt
    19801 cttttttctt tggaatgtct gtaaaaaatc ttcctggata tcattaatat cgctgccgag
    19861 caaccgcggc cttttcaaaa aaacccatgt tgcaacggcc gccaacatac agcatacgat
    19921 tacaaaggcc gcgagctcac tgcgtataaa agtatgcagg ccaagaaagg caagataggc
    19981 gggcgttacc cagcagatcg ttaaaaccac accgttgtaa taaggactaa acaccagttt
    20041 tttccagtcg tttggaaata tgcggttttt tatgatcgct atcatcataa tatatgagat
    20101 cactgttgaa atgaaaatac tccagccgat ccctgttaaa ccgttccata aatagccaaa
    20161 atatatcagt acgcaaatga tcacggagtt ctgtattttc ctgatgagat ttaacctgat
    20221 tagtccatgc acacgcatga gggtgtcgcc aaggcttgca gttgttcgca aaggaagatt
    20281 cagaaaaaat atttgcagta atggaactgc gtctaaccat ttttgtccga gcaaaacgag
    20341 cactatctgc cggctgaaga gaataagaaa aacagtcaac ggcaggaggc ccgaaattat
    20401 cagcgacagc gttttattaa atgcgccaaa agtgcccttg accgtgtctg tctttttcac
    20461 gagcgcaggc atcatgacgc gctgaaccat gtcatataaa aaccgctgcg gaatgttcat
    20521 gatgcgaaaa ctccggtcga acacgccgag cacagcagtc gacacaagct taccgacctc
    20581 cagaacaatt ccaaaattta caatgtatgt gttgaagcgg atcagcgtta acccggaacc
    20641 ataaccgacg agatctttcc aatgctgctt cgtagagcca aactttaggg gtagcggctg
    20701 gtaccataaa agcacgagca gctctgcgcc gaagtaaaag agctgcgagt aaaccagcga
    20761 catcactcca actccaagat atgcgagcac gatccccaag acatttgaaa gcagcagcat
    20821 tacaccatcc gcaatgaata tctttttaaa cgcaaatttt ttctgcagca acgcaaagga
    20881 agcagagtac atagcggcaa acaggaaaat aaaactgaat atcctgagcg atgaggtaag
    20941 ctgcggttga tgataaaagt ccgccgccca cggcgcaagc aggaacacac cgaggtaaag
    21001 tatggcggcc agcagcatgc ttgagtaaaa cgctgcattc acatgttgct tatcaaattc
    21061 gcggcgttgc aataacgcgt cgcccatgcc gccatcgcca agcatattgc cgaagttgat
    21121 gaaagaattt agcagggcga agatgccaag ctcttctttc gaaagcaacc ttgccatcac
    21181 ggcatagtaa gcgaactgcg agaaaacctt cacgcttacg ttcagcattt gccaaacccc
    21241 ggattgtata accttcttct taaccatacg ttcaaccgcc cttgtaatga ttatgccata
    21301 agtgtaacgc aaatgcgcgc tgacttatgg cataacccgc agaaataaat tcttcttatg
    21361 ctcttgcctt ttttgtcttg ttgactccaa ataatctttg gaaaaatgat cttttcccgg
    21421 cgtagtacga gtagccatat ttgtatccgt cgctgtagcc gtaaccatac ccataaccat
    21481 agcccggtat cggcttcacg tcgttaaaaa tgatgtctat ttttttgaac tttctgtcgt
    21541 tcgccaaagc ctggataata ttgacttgct ttttataagt aaatctttgt cttaccacat
    21601 acaagatcac gtcagcaaac cggcttaata acaatgcatc ggtaacaaga cccaccggtg
    21661 agcagtcgat cactacatag tcaaattcat tgcgggcttt tacaaacatg tcagccacct
    21721 tctcatggac caaaagttct gccggattcg gcacaaacgt gccagagccc attacataaa
    21781 aattaggatg aacatcagat cccttaaaaa tgtcatttag ggttgcttcc gagatcacat
    21841 aattagaaaa cccaaggtgg ttatcaacat ggagcgtatc agttatgcgg ggtttcctca
    21901 ggtcgagttc cattaaaaga actcgtttac ctgatatggc aatgctgtag gccaggttca
    21961 ttgccacgaa tgattttcct tctccgccca tgctcgacgt tgtcatgatc accttttcgg
    22021 atgggtttgg catcaggaac tgcaggttag ttcgcagcgt tctgaactgc tctgcaattt
    22081 catgacgcga atcttttgat accaccaacg gctttcctga tttactgtgg ctcaccgtgg
    22141 caacgacagg aacgttcgac acgttagtaa tgtcttcgct ggtaattacg cgcgtgttca
    22201 gcagttcttt caggaatatg ctcacagacg gaattaaaag acccaggaat attgccgccg
    22261 caacgatgag gatcacattg ggaaagtatg gaagtggccc gcgtgtaggc tggtcgataa
    22321 ccctgatggg accgaaatta ttagatttcg aaactgcggt ctgttccctg gtttgcaaaa
    22381 gatacaggta tagggcctgc attacatttt gccgtcttgt aaagtcaagg tagatgcgtt
    22441 cctgcgtggg cacttttgaa atttgcccga acatttgaga gtttcgggtc tgcagatctg
    22501 cctgctcagt ggcaatagac tttttgtagg tgctcatcat actaagcagg tccccgcgaa
    22561 gctgcctgag ctgtatgtcg atattcttga tcgctggatt tgcctcggtg ctgttctgca
    22621 aatatgattg acgctggagc tgcagcgtgt tgtatttatc aagtgtctgc acaaacgccg
    22681 gatcctggat cggcgccgtt gtaggcatca cgcgcgtggc attctggtcg gccatcaggt
    22741 attgttcaag atcttctacc actttcaatt cgacgtcttt ctgtgcgagc gtttgcgtaa
    22801 ccgtactcgt ggtttgtacc aactccttgg cgtcgtctga cagatcagta agccgatttt
    22861 cctttttgaa ggattcgata ttcctgtcga tattgttcag gtcctgcgac acgccgatca
    22921 aacgttcatc gataaatgcg atcgtgctgt ccgctattcg attgtggtca gcgatatcag
    22981 cctgtacata caaactgatc aaatgcttga gcatatcctc attcttctcc ggcgtggggc
    23041 cgtcgataga aagatcgatg atgttcacat attcattcgt tgtcattgcc tctatgtcgt
    23101 ccatataggc atacagtgtt gcgttgtaac tattgatgat aagaccgagc tgatggttgg
    23161 gattggtttc gatcacattt ggattgcttt ccaaaaccca gcttccgtaa ttgaaatgca
    23221 gcgtgtcgcc aaatgaagct gtaaatgtgc tgtcgctgtc ttcatcctcg aatttcactt
    23281 tattgttgat caccctaaca tcgtactcaa ccggctcggg aatgtttttc agccatagga
    23341 tcttaatgaa atagggggag tttttataga tctcttcata ccgtatatcg ccttgtcccc
    23401 aatatgaaac attgagctga aggtcatgca cggtcttttc aacgagtgtg cgggaatgaa
    23461 ttatctcaag ttcgttgctt acagagttgg gtattgaaaa taaaccgaga tcgctcaaca
    23521 ctgttgactc gtcggtgcct gtcaattgtt tgccctgcga attataaccg gtaaccaaca
    23581 cccgcccggt tacggtgtag cgcggagatg tgtagaggta gatcaaaacg ccgaggccaa
    23641 gaaataagat aacagatagt acataccagt accagttgcc caccactttt gccacaagaa
    23701 actttatgtc gacgtcctgg tgcggcctga tattacttgt tgtaaaatca ttattcagat
    23761 cctgcataaa taggctgttt atgttttgaa tactgttagc aacaacgaac taaatctacg
    23821 ctttattgaa tcagccgggc tgtaattacg atcatcagcg acagtgctgc accgatcaca
    23881 gcaatgtccc ttgttctgta cgcacttgca cttgccactc tttctgatgt aggttcaaca
    23941 attaaaacgt cgttcggctt aagataaaag tacggagagg tgattgcaga gctgctatca
    24001 agatttagtc ttacgatttc ttttttacca tcggcatcgc ttcgaacgag catcacgtta
    24061 tctcttctcc cgtagatcgt tatatcgccg gcgagcccca gcgcatcaaa aatggtaggg
    24121 ttctcattag gaagcaggaa agtagtcgga tttcttactt ctcccaacac cgtaattttg
    24181 aagttcgtga atcttacatt tacaaccgga tctttaaaat aaaccgatat cttttcgctt
    24241 ataagatttt tgacctgcac gctcgtcaat ccctttacca gtatgtctcc tacataaggt
    24301 aaatgcacaa agccatccct gtctaccaaa taaccagcta caaccgcctg cgcgacgttc
    24361 gaaccggaag cgcctgacac ggcacctgta tttatcggca aatttccctg gttcaatatc
    24421 acgttcgcct gcgggtcaag tgtttgaata gtgatattta agacatcgtc tggccttaca
    24481 agtgctgcac cggatggaat ggactgcagg actttgttcg cagctgttga atcgggaata
    24541 tctttaaaat aagctatacg ttgaggagta caggatacaa ggtttataac gagtaggatt
    24601 gcgcaacaat aggtcagaca ccgagtggct gcttgaaaca ttattaattt tttataatct
    24661 taaaagcccg caaaaatagc ggggaaggcc atcaacacca aattaaaaat caatgtccaa
    24721 aggcgacggc agcacgctga tgccagcgct catagatcat tccgcgtcat gacacacatc
    24781 ttttttatat tctaaggaac ggtaatctta ttgttgacac ggttcaaatc ggccatccgc
    24841 tgacttggat cgatctcaac tgactttatt tctgctacgc tccgggtgat gcgaaaggtg
    24901 tattcaggat ccacccattt ccattctgtt tccacgaccc gttttgtctt gtcttccggt
    24961 ggtttagcgc catacatcaa attcataggt atatagtaca tttccttcgt gctgtccttg
    25021 taggttatca aaacgtcaac aggcatgctc attaaggcga gccgcttaag tgttacgaga
    25081 gtagtatcgc cgctcatgtt gatgtcgccg atggcataat cgatactcct ggttgtatat
    25141 atccagtatt ctttgtacca ctgcagctcg aggccgctga ctttttcagc cacgcggata
    25201 aaatcattgg ggtttggatg tttgaatttc cactcattat aatattccag taaaatattg
    25261 tcgaggttct tgtctccgac tatatacgcc agttgcacta agaaaataga gcctttagag
    25321 taggtggcat catacgcaaa gttggtattg taatggtctg cgtgtgtact taaaggttct
    25381 tctttcccgc tttttaccaa acggtaataa gaggtgtatg aattagtaaa agcaaacgag
    25441 gtatcgccgc gcagatacgc gctgatgcgc aat
//
LOCUS       DASQJI010000590         3353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1457758,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000590 DASQJI010000000
VERSION     DASQJI010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457758"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..488
                     /locus_tag="VEV83_16095"
     CDS             150..488
                     /locus_tag="VEV83_16095"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46700.1"
                     /translation="MLKLLPSLLVFVSCFTCIKAQESYKAPQDYVPAVTIVTPKNNRI
                     EIRVKNSRRGIPQSIDKIFQPFFTTKPTGDGTGLGLSLSYDIIKAHGGEINVNRTNQE
                     GSEFILSLPL"
     gene            588..1820
                     /locus_tag="VEV83_16100"
     CDS             588..1820
                     /locus_tag="VEV83_16100"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HYK46701.1"
                     /translation="MVSNLQLTKTKTGTGFSQNENSYEAGAELAMKALGNNELDEHTM
                     FLLFASPHHDAELLMDGLRSVIGNKPVIIGGTTIGILTNDFLSYTGAMAGGAFLSSEN
                     SFFRVFTEENIKDREFDAGCNLARKMTAANAGDDNALLLFYDSVKFTANEGNFMFHLA
                     VPLLEGMYGELQHWPVVAGVGVMGDMSLTHACAIWINEKIMRHGLAAVTINGPLKVDT
                     VVLSGTRPASGYHLITKAVDNIIYELDGKPALEVIDGILGGSMSWDEYPLFITLGVNN
                     GDKFEEYQQENYSNRFCLGIDKEQKSMIMVETDLRQGQEVQLMRRDFDFAYIEPEISK
                     LFSKIGDRKPVFAYYIDCVGRVSAYSGMAEEESLEVIRLIRNVPCFGIFSGVEITNIK
                     NNVKPLDWTGVLCVFSEE"
     gene            1829..3349
                     /locus_tag="VEV83_16105"
     CDS             1829..3349
                     /locus_tag="VEV83_16105"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46702.1"
                     /translation="MNDSIDSREQLEKEIAYYKKQLDQMSGESIRHDYIRTSLRHELK
                     QKKDAFAVLTILQKKFTVTTPLDVLFTETIKAINGYLGMDRSVVLIPSEAGELFKPAY
                     SYGYPASFFNETEPIKIHLPPSYVQPGGSILVNKKVHPDETGVEIQNKLSIAYFAGVP
                     VLHEERAIAFIISGRQVERIPFNAPLDKGDIDTLTAINALISSVIQNKRVLELRIQKA
                     ELEKQREAVTEQRDILERTLTELRNTQAQLIQKEKMASLGELTAGIAHEIQNPLNFVN
                     NFSEVNGELVDELKTQLATGNLQLATEIADDLKDNETKILYHGKRADAIVKGMLQHSR
                     VSTGQKELTDINALADEYLRLAYHGMRAKDKSFNATLQTDFDASIGKINIVPQDIGRV
                     LLNLYNNAFYATSDKLKAHTPQLKADSSQYVPTVTVVTKKADDKVLISVKDNGPGIPQ
                     LIVDKIFQPFFTTKPTGEGTGLGLSLAYDIIKAHGGEIKVETKEHEGTTFIIRLPL"
BASE COUNT         1020 a          721 c          774 g          838 t
ORIGIN      
        1 ggattgtcac tcagctacga cgttatcagt aaggaacatg gtggccagat caaagtgaac
       61 acgaaggagg gagagttcac cgaatttata attgagttac cggcgtaacg atcagatgca
      121 tgcaatttta aatattgcac acgttttata tgttgaaact actgccatca ctactggttt
      181 ttgtgtcttg ttttacgtgc ataaaggcac aagaaagcta taaagctccg caagattatg
      241 tccctgccgt cactattgtc acaccgaaga ataatagaat cgaaatcaga gtaaaaaata
      301 gccgccgtgg cattccgcaa agcatcgata agatctttca accattcttc actacaaaac
      361 caacaggcga tggcacagga ctcggcttaa gcttgagtta cgatatcatc aaagcacatg
      421 gaggagagat taacgttaac aggacgaacc aggagggcag cgaatttatc ctttccttgc
      481 ccttgtaatc actccgcttt tcgcagatgc tgcgcagaag gctcatcttt atgatcttgt
      541 tgcttgcagt taataatcat ttactatttt tagaataaca tatcgctatg gtctcgaatc
      601 tgcaattaac caaaacaaag accggtaccg gttttagcca aaacgaaaac tcatatgaag
      661 ccggagcgga acttgcgatg aaagcgctcg ggaataatga acttgatgag cacacgatgt
      721 ttttgctctt tgcttctcct catcacgacg ccgaattgct gatggacgga ctgcgatctg
      781 tgattggcaa taaaccggtg ataattggcg gcactacaat cggtatactc acaaacgatt
      841 tcctttcata cacgggtgct atggcaggag gtgcttttct atcttcagaa aattcttttt
      901 tccgggtgtt cactgaagaa aatattaagg acagggaatt cgacgctggc tgcaacctcg
      961 cacgaaagat gacagccgca aatgccggtg acgataatgc gttgttacta ttttatgata
     1021 gcgtaaagtt taccgcgaat gaaggaaatt ttatgtttca cctggccgtg ccgttgctgg
     1081 agggcatgta tggagaatta cagcactggc cggtggtggc aggcgttggc gtcatgggcg
     1141 acatgagcct tacacacgca tgcgccatct ggatcaatga aaagatcatg cgacatggac
     1201 tggcagctgt cactatcaac gggcctttga aggtggacac cgttgttttg tcgggcacgc
     1261 ggcctgcgag cggctaccat ctgataacta aagccgttga caatatcatt tatgaactgg
     1321 acggcaagcc ggcactggaa gtgattgatg gtatcctcgg cggttcaatg tcatgggatg
     1381 aatatccgtt gttcattaca ctcggcgtga acaacggcga taagtttgag gaatatcagc
     1441 aggaaaatta ttcaaatcga ttttgtttgg ggattgacaa ggaacaaaaa tcaatgatca
     1501 tggtggaaac agatttgcga cagggacagg aggtccaact catgcggcgg gatttcgatt
     1561 ttgcctatat agaaccggag atcagtaaat tgttctcaaa gattggcgat cgcaaacccg
     1621 tgtttgctta ttatatcgat tgcgttggcc gcgtatctgc ttattccggc atggccgaag
     1681 aagaatcgct cgaagttata aggctgataa gaaatgtccc atgcttcggt atcttctccg
     1741 gcgtggaaat cacaaacatt aagaataacg taaaaccgct cgactggaca ggcgtgctgt
     1801 gcgttttcag tgaagaataa ccaaaattat gaacgacagc atcgacagca gggagcaact
     1861 ggaaaaggag atcgcttatt ataagaaaca gcttgaccag atgtcgggtg aaagcattcg
     1921 gcatgattac atccgtacgt cgttaaggca tgagctaaaa caaaagaaag atgctttcgc
     1981 ggtattaacg atcctgcaaa aaaaatttac ggttacaacg ccactcgatg ttttattcac
     2041 tgaaacgatc aaagcgatta atggttattt aggaatggac cggtccgttg tgctcatccc
     2101 gtcagaagcc ggcgaactgt tcaaacccgc ctactcatat gggtaccccg ccagtttttt
     2161 caatgaaacc gaaccaataa aaattcacct gccgccttca tacgtgcagc ccggcggatc
     2221 aattctcgtg aataagaaag tacaccctga tgaaacaggt gtggaaatac aaaacaaact
     2281 ttcgattgct tatttcgcgg gtgttcctgt gctccacgaa gaaagagcca tcgctttcat
     2341 tatttccggc aggcaggttg agcgaattcc ctttaacgct ccgctcgata aaggagatat
     2401 agacacgctg actgcgatca atgccctgat cagttctgtc attcaaaata aaagagtatt
     2461 agagcttcgg atccagaaag ctgagttaga gaaacaaaga gaagccgtca ctgaacagcg
     2521 cgacattctt gaacggactc tgaccgaatt aagaaatacg caggcgcagt tgattcaaaa
     2581 agaaaaaatg gcttcgcttg gtgagctcac tgcaggtatt gcacacgaaa tacagaaccc
     2641 gttgaatttt gtgaataatt tttctgaagt gaatggagag ctggttgacg aattgaaaac
     2701 gcaacttgcg accggcaacc tgcaacttgc aactgaaatt gcagatgatc taaaagataa
     2761 tgaaactaag attctttacc acggcaaacg cgcagatgcc atcgtaaaag gaatgctcca
     2821 acattcgcgt gtcagtacag gccaaaaaga attaacggat attaatgcac tcgccgatga
     2881 atatttgcgt ttagcttatc atggcatgcg ggcaaaggac aaatcattta atgcaacact
     2941 acaaacagat tttgatgcat cgatcggcaa aatcaatatt gtgccgcagg atattggaag
     3001 agtgctgcta aatttataca acaatgcttt ttacgcaacg tccgacaagc tcaaagctca
     3061 caccccgcag ctcaaagctg atagcagcca atatgtcccc acagtcacag ttgtcacaaa
     3121 aaaagctgat gacaaagtct taatttccgt aaaagacaac ggccccggca ttccacaact
     3181 catcgtcgat aagatcttcc agcctttctt taccacaaag cccacaggtg aaggaacggg
     3241 attgggtttg agcttagctt atgatattat aaaggcgcac ggcggtgaaa taaaggttga
     3301 gacgaaagag catgaaggaa caacgttcat catacgactg cctctctgaa ttc
//
LOCUS       DASQJI010000591         6882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1301530,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000591 DASQJI010000000
VERSION     DASQJI010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6882
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1301530"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VEV83_16110"
     CDS             <1..275
                     /locus_tag="VEV83_16110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK46703.1"
                     /translation="VPFYGGQPASEDVPNIQAPLLLHYAGLDSNVNKGWPAYDSALKA
                     NGKEHTAYVYPNVNHGFHNDTTPRYDKAAAELAWQRTIDFFREKLK"
     gene            complement(373..1527)
                     /locus_tag="VEV83_16115"
     CDS             complement(373..1527)
                     /locus_tag="VEV83_16115"
                     /inference="COORDINATES: protein motif:HMM:NF042839.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6786 family protein"
                     /protein_id="HYK46704.1"
                     /translation="MSNTNDSAFAKGSYGYDAAFVKQHAQHVLELEDGDAKVLLCADY
                     QGRVFTSSASGDRGTSYGWLNYALLSSGEKKQQFNPVGGEERFWLGPEGGQYSIYFKK
                     GDPFDYPHWQVPAIIDTIPYDIVEHNNTSATFSKTASVTNYSGTTFDLDITRKIQLLD
                     KDAIQQKLQTTIPDGVRYVAYESSSQIKNAGSDAWKKDNGLLSIWLAGMFMPSEQTKV
                     FIPFLPGSNAHSFITDDYFGKIPADRLVVKDSVLYFRCDGKQRGKIGIAPEIAKPLVG
                     SYDFEKNILTVLVPEVHKDEMYVNSKWEIHKEPYKGDVINSYNDGPLQDGSQMGPFYE
                     VESSSPAKELKPGEVQEYHQTTAHFEGDYNSLRQLTKQLFNIDLDDVKKW"
     gene            complement(1706..3364)
                     /locus_tag="VEV83_16120"
     CDS             complement(1706..3364)
                     /locus_tag="VEV83_16120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HYK46705.1"
                     /translation="MKSKTLKIHVNDNVAVALTVLYKGEVINGENFSEVVVQEIIPAK
                     HKFALCDVQEGDPVIMYGVLVATAVKHIPKGGLINPQNVKHAAGTYELREHEKHWHAP
                     DVSKWLEKTFMGYHRNDGSVGTRNYWVVIPLVFCENKNVEVLQEAFMKALGYQPQYSP
                     YEAMVQRYVQQYRSGKIENDILVPDIDVDEMPAMPDKIFRNVDGIKFLTHTLGCGGTR
                     QDARALCGLLAGYIAHPNTAGATVLSLGCQNAQIALLKEELEKRDPEFSKPLIVLEQQ
                     KIGNEKKLLAEAISKTFAGLVEANKLKRQPTPLNKLCIGLECGGSDGFSGISANPAIG
                     YTSDILVALGGSVILSEFPELCGVEQELSDRCVDDATAERFLELMGTYNQRAVEVGSG
                     FYANPSPGNIKDGLITDAMKSAGAAKKGGTSPVTDVLDYPEKATKPGLNLLCTPGSDV
                     ESTTAEVGAGANIVLFTTGLGTPTGNPVAPVLKLSTNTVLYNKMQDIIDIDTGPIIEG
                     EESIAQAGERIFEYVIRVASGEVLAKAEASRHDDFIPWKRGISL"
     gene            4088..4486
                     /locus_tag="VEV83_16125"
     CDS             4088..4486
                     /locus_tag="VEV83_16125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46706.1"
                     /translation="MKPKHFLTNITIAFASVLMITSCSKEAAPSPQPTGSYQPPKVLN
                     VVADDWVQQAYTGMYVNPFIGILQNRGAANVYLEGSEDEMLLSPTPADFATGEIWITT
                     SSTDLIINFRDLSGDPLPFSRLNIKIVFND"
     gene            complement(4565..5665)
                     /locus_tag="VEV83_16130"
     CDS             complement(4565..5665)
                     /locus_tag="VEV83_16130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK46707.1"
                     /translation="MKRVCASRTMNLKISIITGTLLLIVSVLSAQALRVGVAGLSHDH
                     VNGLLNQYKNGEVIIIGIAESDQQLVKRYQQKWNLPDSIFYTSVDQMLQHTHPNAVLA
                     YNAIADHLSVVEACAPKRISVMVEKPLATTVKQAERMVALAKEYHILLLTNYETTWYS
                     SNQQVFEMIHEQNVVGNIRKMVVHDGHQGPQEIGCSKDFLAWLTDPVKNGGGALTDFG
                     CYGADLMTWLMNGKAPVSVTAITHQIKPNIYPKVDDDATILLEYPDATGIIEASWNWP
                     FGIKDLEVFGEKAYLHALNSNTVERRDSVTYYKVDVKPTRYKDNLSYLAAVLKGEIQS
                     ENDPSSLENNVIVVRILQAARESARQGKKIAL"
     gene            5665..5787
                     /locus_tag="VEV83_16135"
     CDS             5665..5787
                     /locus_tag="VEV83_16135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46708.1"
                     /translation="MYGFYDANDEDKEGYLRLSFAGDREFDKLFVLIGRTVVLT"
     gene            6047..>6882
                     /locus_tag="VEV83_16140"
     CDS             6047..>6882
                     /locus_tag="VEV83_16140"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HYK46709.1"
                     /translation="MKRSFLLMLLFTATAAIAQYKTIGNIERLDPSLDAIISKDAKIE
                     IIAEGFDWSEGPLWLDSRRMLLFSDIPQNSIYKWTEEKGKEVYLKPSGYTGTVQRGGE
                     TGSNALLLNKDGKLVLCQHGNRQMAMMDASLDDPKPDFKTIASTYQSKKFNSPNDAVF
                     RANGDLFFTDPPYGLEKNMEDPLKEIPFQGVYRVNAKGEVKLLVDSITRPNGIAFMPG
                     GKTLIIGNSDDQKPFWYMYDVDEHDSLVNPRIFYDPPGAEKFQQGGHDGMKIDSDGNV
                     FGT"
BASE COUNT         1852 a         1569 c         1458 g         2003 t
ORIGIN      
        1 ctgtgccttt ttacggagga caaccagctt ccgaagatgt tcctaacatt caagctccgc
       61 tgctgcttca ctatgcgggg ctcgactcaa atgtcaacaa aggctggccg gcgtatgaca
      121 gtgctttaaa ggcaaatggc aaagagcata ctgcctatgt ttacccaaac gttaaccatg
      181 gatttcataa cgatacaacg ccacgttatg ataaagccgc tgcagagctg gcgtggcagc
      241 gcacgattga tttcttcaga gaaaaattaa aataaaccca taaacgcttc cttgaataac
      301 gtttcgccac agatcatgaa atccgacatc agagatcaga catcctcaca tcagagatca
      361 gagatctact tcctaccatt tcttcacatc atccaaatca atattgaata actgctttgt
      421 aagttggcgc aacgaattgt aatcgccttc gaaatgggca gtcgtttggt ggtattcctg
      481 cacttcgccc ggcttaagct ctttcgccgg tgatgaagat tccacttcat aaaatggccc
      541 catctggctg ccatcctgca gaggcccatc gttgtaagaa ttgatcacgt cgcctttgta
      601 tggctcttta tgtatttccc atttcgagtt cacatacatt tcgtctttgt gtacttcagg
      661 aaccagaacg gtgagaatat ttttttcgaa atcataactg ccaacgaggg gctttgcaat
      721 ttcaggcgca atgccgatct tacccctttg cttgccatcg caccggaaat ataatacact
      781 gtctttcaca accagcctgt cagccggtat ctttccgaag tagtcgtcgg tgatgaacga
      841 gtgcgcattg gatccaggca agaacggaat aaatactttt gtttgttctg atggcatgaa
      901 catccctgcc agccagatag agagcaaccc attgtctttt ttccatgcat cgctgcctgc
      961 attttttatt tgactcgaag attcataagc cacgtaccga acgccatccg gaatagttgt
     1021 ttgaagtttt tgctgaattg catctttatc gagcaattga attttccgtg ttatatcgag
     1081 atcaaatgtg gtacctgaat aattcgttac agaagctgtt tttgaaaatg ttgcagatgt
     1141 gttgttatgt tcaactatgt cgtacggtat ggtgtcgatg attgccggca cctgccaatg
     1201 aggatagtca aaaggatcgc cttttttgaa atagatggaa tactgaccgc cttccgggcc
     1261 taaccagaat ctttcttcgc caccaaccgg attaaattgt tgtttttttt caccggacga
     1321 aagcaacgcg taattgagcc agccatagct cgtgccgcga tcacccgatg cgctgcttgt
     1381 gaaaaccctt ccctggtaat ctgcgcataa caaaactttt gcatcaccat cttccagttc
     1441 caacacatgt tgcgcatgtt gtttcacgaa tgcagcatca taaccgtaag aacccttcgc
     1501 gaaagcagaa tcgttagtgt tactcatgga agtttgatta ttgttacacg ccgataaagt
     1561 aaaaagtaaa acataaaaag taaaagagga tcgcatagta cagttgtatt ctctttgagt
     1621 tttgattttt ggttcttggt tcttcaattt ttcacaaacc tgttgttctt tttgactttt
     1681 gatttttggt tcttggatct tatttttaca gagagatacc acgcttccat ggaatgaagt
     1741 catcatgacg cgaagcttcc gcttttgcca gcacttcgcc actcgcaacg cggatcacat
     1801 attcaaaaat tctttcgccc gcctgtgcga tactttcttc tccttcgatg atcggtcctg
     1861 tgtcgatatc aataatgtcc tgcattttgt tatacaaaac agtgtttgtt gaaagcttca
     1921 acaccggcgc aacagggttt ccggttggcg tgcccaaacc ggtggtaaat aaaactatgt
     1981 tggcaccggc gcccacttcc gcagttgtcg actcaacatc actgcccggc gtacacaata
     2041 aattcagtcc cggctttgtg gctttttccg gataatccag cacgtctgtt acgggcgaag
     2101 tgcctccctt ttttgccgca cctgcggatt tcatggcgtc ggtaattaat ccgtccttga
     2161 tgtttcccgg cgacgggttt gcataaaacc cggacccaac ttcaactgca cgttgattgt
     2221 aggttcccat cagctccaaa aaacgttcgg cagtcgcatc gtcaacacac cgatcactaa
     2281 gttcctgctc tacaccgcac aattccggga actcggaaag aatcacagag ccgcccaatg
     2341 cgacgaggat atcggatgtg tagccgatag ccgggttcgc cgatattccg gagaatccgt
     2401 cggagccgcc gcattccaaa ccaatacata acttatttaa aggagttggt tgccgtttca
     2461 atttattcgc ctccacgagg cctgcgaacg ttttactgat cgcttctgca agcaattttt
     2521 tttcattgcc gatcttttgt tgctcgagta cgatcaaggg ttttgaaaat tcaggatcac
     2581 gtttttctaa ctcttctttt aataatgcaa tttgcgcatt ttggcaaccc aggcttaaga
     2641 cggtcgcacc tgccgtgttt ggatgtgcga tgtagcccgc aagcaagccg caaagagctc
     2701 ttgcatcctg ccgtgtgcca ccgcagccca gcgtatgcgt cagaaatttt attccatcga
     2761 cgtttcggaa aattttatca ggcatcgcag gcatctcatc aacgtcgata tcaggaacca
     2821 aaatgtcatt ctctattttg cccgaccggt attgttgcac gtagcgctga accatcgcct
     2881 cgtatggcga gtactgcggt tgataaccca acgctttcat gaacgcttcc tgtaaaactt
     2941 ccacattttt gttttcgcag aacacgagtg gaattacgac ccagtaattt ctggttccca
     3001 cagatccatc attcctgtga taacccatga atgttttttc caaccactta gagacatcag
     3061 gtgcatgcca atgcttttcg tgttcccgta actcatacgt gcccgccgcg tgttttacgt
     3121 tttggggatt gatgagtcct cctttcggaa tgtgttttac agcggttgca accaatactc
     3181 cgtacatgat aacaggatcc ccttcctgca cgtcgcagag cgcaaacttg tgttttgccg
     3241 gaataatttc ctgtacaaca acttccgaaa aattttcgcc attgataact tcgcccttgt
     3301 ataaaactgt aagagctacc gcgacgttat cgtttacatg tatcttaagc gtttttgatt
     3361 tcattgtgca ggattctaaa gtaagaaatt ttgtattggc tgtgaaactt taatgaagga
     3421 ctggtaggcg gctggtggtt ttcaattgaa cctttgttgc atcacattca tacgccttac
     3481 tcttcttgct cctcgcgcgg ttcgcgctgg taggggtaat ttaatagaca aggagatcgg
     3541 cgtaataaaa ggaaacgttt cagtaacatg gcgtaggctg gctctgtgtg cagttacttg
     3601 taggcgtttg aatggaattg gatgctactt atcgaaccgc attttataat acagtctcgt
     3661 aaattgaaac agaagaattt gttggtggag aatcaacaaa aaagggtgga agctgccgcc
     3721 gttaacctaa gacataaagg ctgatcacaa ctgttacagc cattattaaa aacaaaacac
     3781 caagcattcc cataaatttt gctacgctca tgtctttttt attactcata cagataattt
     3841 aaatatttcg aataagcatg tctaaaaccg gcataaggta gttcttattt agcagctaga
     3901 gattatttcc gttgctgtga cttttctttc cgaatgattg gagccaggta agaagaatgt
     3961 ttacgcctcc tgtcagtatc atggttgagg actaccccaa aaaaattctg catgtcagta
     4021 tagtttccgc acacccggga attacgacta aactgaaaac atattcattc acgttaaaaa
     4081 ttctattatg aaaccgaaac attttctcac caatataacg atcgcctttg cttctgtact
     4141 catgatcacc tcatgctcca aagaagctgc gccatcaccg caaccaacag gctcatacca
     4201 accaccaaaa gtattaaacg ttgtggcgga tgattgggtg caacaagcgt ataccggcat
     4261 gtatgtaaat ccgtttattg gcattttaca gaacaggggt gcagccaacg tatatcttga
     4321 aggttccgaa gatgaaatgt tgcttagccc aacgcctgcc gatttcgcaa ctggcgaaat
     4381 atggataaca accagcagca cagatcttat tatcaatttt agagacttga gtggcgatcc
     4441 attgccattc agccgcctga acattaagat cgtgtttaac gattaagacc ttggcagtat
     4501 cggtgatcta tgcagttgga aaagcattga atgatcttta gttgatcaaa aagaaatcgg
     4561 gcagtcacag cgcgattttt tttccttgcc tggcagattc ccgtgcggcc tgcaagatcc
     4621 ttacaacgat cacattattt tcaagtgagg acgggtcatt ctcggattgg atttcacctt
     4681 tcagtacagc cgctaaatag ctgagattat ctttataacg tgtaggtttc acgtccactt
     4741 tgtaatacgt gacagaatct cttcgttcaa ccgtattgct gtttagagca tgtaaatatg
     4801 ctttttcacc aaatacttcc aggtccttaa tgccgaaagg ccagttccag gaagcttcaa
     4861 taatccctgt ggcatcagga tactcgagca agatcgtcgc atcatcgtca actttgggat
     4921 aaatgtttgg tttgatctgg tgcgtgatgg ctgttacgga tactggtgct tttccattca
     4981 taagccacgt cataagatct gctccataac aaccaaaatc agttaacgct ccgccgccat
     5041 ttttcaccgg gtcagtgagc cacgccaaaa aatctttact gcaaccgatc tcctgcggac
     5101 cctggtggcc gtcatgcaca accatcttcc tgatattgcc gacaacattt tgttcatgga
     5161 tcatttcgaa aacctgctgg ttactcgaat accaggtggt ttcataattt gtgagtagca
     5221 gtatgtggta ttcttttgcc aatgcaacca tgcgctcggc ctgtttcaca gttgttgcca
     5281 atggtttttc aaccatcaca gaaatgcgtt tcggcgcaca agcttcaaca accgacaaat
     5341 gatctgcgat ggcattgtat gccagcactg cattaggatg tgtgtgctgc aacatttgat
     5401 caacgcttgt gtaaaaaatc gaatcaggta aattccactt ttgctgataa cgtttcacca
     5461 gttgctgatc tgactctgcg atcccgataa taatcacttc gccattcttg tattgattca
     5521 ataggccatt cacatggtca tgagagaggc cggcgacgcc gacccggagc gcttgcgcag
     5581 acaaaacaga aacgatcaac aataatgtgc cggtaataat cgaaattttt aagttcattg
     5641 ttcttgatgc acaaactctt ttcattgtat ggattttatg atgcgaacga tgaagataag
     5701 gaaggttatc tacgtttgag ttttgccggc gatcgtgaat ttgataagtt gtttgtgctc
     5761 attggaagaa cggttgtgct cacgtgataa tttctcacag ataacacaga tagacacaga
     5821 tttaaaaaca tcgtagctgg cacaattaga agtgtaacgt gtctcacctt tcttaattgg
     5881 ggtacggata gaaaatattt ttgcaagaaa tcccttcagg gcgacccgat ctaacatatc
     5941 cgtgttgatc tgtgcgatct gtgcgatctg tgagagacat tatccacccg catttccacg
     6001 aaaaattttt atcttaacga gtttttattc ccattcaact tctgttatga aaagatcatt
     6061 tttactaatg ctgcttttca ccgcaacagc agcaatagcg caatacaaga ccatcggcaa
     6121 tatcgaaagg ctggatccat ccctcgatgc gatcatctcg aaagatgcaa aaattgagat
     6181 cattgctgaa gggttcgatt ggagtgaagg acctttatgg cttgatagcc gcaggatgct
     6241 actgttctcc gatatacctc aaaatagtat ttacaagtgg acagaagaaa aaggtaagga
     6301 agtttatttg aagccatccg gctataccgg cactgtgcag cgtggcggtg aaactggttc
     6361 aaatgctttg ctgttgaata aagatggcaa acttgtactt tgtcaacacg gaaaccggca
     6421 aatggcgatg atggatgcga gcctcgatga tcccaaacct gattttaaaa cgatcgccag
     6481 tacttatcaa tcaaaaaaat tcaacagccc gaatgatgca gtatttcgag cgaatggtga
     6541 cttgtttttt acagatcccc cttatgggct ggaaaagaat atggaagacc ctttaaaaga
     6601 aattcccttc cagggtgttt accgcgtgaa tgcgaaagga gaggtgaagt tgctcgtcga
     6661 ttctatcacg cggccaaatg gaattgcctt tatgcccgga ggcaaaacgc tgatcatcgg
     6721 caactctgat gatcaaaagc cgttttggta tatgtatgat gtagatgaac atgattcgtt
     6781 ggtaaatccg cgtatatttt atgatccgcc aggcgctgaa aaatttcaac agggcggaca
     6841 tgatggaatg aagatcgaca gcgatgggaa tgttttcgga ac
//
LOCUS       DASQJI010000592         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2378252,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000592 DASQJI010000000
VERSION     DASQJI010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2378252"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..600)
                     /locus_tag="VEV83_16145"
     CDS             complement(43..600)
                     /locus_tag="VEV83_16145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46710.1"
                     /translation="MHLKSALALLTLICSGYAYSQDSLAVDSVKRILSQRYEQLAAAM
                     DERDLSKIVSFRTDDFHSIGPDRRVLDNIMMKEYSRQFITNNIPPYNIKNTILSLRLS
                     ENRIVAVADVLQEAIRKRELAGKVREVKTSVVQTETWVFVNEQWKLKLVDNVHDQKRF
                     VDGKRVDPSKPYDPNAPPFEPDKDK"
     gene            909..1304
                     /locus_tag="VEV83_16150"
     CDS             909..1304
                     /locus_tag="VEV83_16150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK46711.1"
                     /translation="MEIKRVGTQPSAKGPEDWFTGAVRIDALFQPNESRRAAAATVTF
                     EPGARTAWHTHPLGQTLIVISGCGWVQHEGGPVEEIHPGDVVWFDPNEKHWHGATQTT
                     AMTHIAIQENLNGKVVEWMEKVSDAEYRK"
     gene            complement(1329..2270)
                     /locus_tag="VEV83_16155"
     CDS             complement(1329..2270)
                     /locus_tag="VEV83_16155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46712.1"
                     /translation="MEFKHCEKSCLLLLVLLTASTSFAQKLGNPRGDPELRGLYDTWE
                     FSVTVGANNFEGDLGGTPGIGGTFKDYTFHTLRPAFGASACYNVNPNYGIRAGFNYTW
                     VCGFDSLIPNTGDQERWRIYRNGNFRSNIWEAYVSADIYPLMLFQKTYEIDRLAPVLG
                     VGLGVFHFKPEKLWGGQWNEVQHLHLEGQEFAEYPDRHEYKLTQLYIPITIALKYYLD
                     YTNKWALTGGLAMRHTFTDYIDDISTTYIDPNLFDKYLPPDQAALAKQLYSTSIRPEK
                     VKPNILKADPNDKDTYLTFFLTLSIRLFHVSPFMYGR"
BASE COUNT          634 a          548 c          546 g          654 t
ORIGIN      
        1 atgcataatt tcttaagatt cgaactcgcg gaaaacaatg gatcatttgt ctttgtcagg
       61 ctcaaacgga ggtgcgtttg ggtcatatgg ttttgacgga tcaactcttt tgccgtccac
      121 aaatcttttt tgatcatgaa cattgtcgac aagtttcaac ttccactgtt cattcacaaa
      181 tacccacgtc tctgtttgaa ccaccgacgt ttttacttcc cgcactttgc cagccaattc
      241 tcgttttcga attgcttcct gtaaaacgtc ggccacagca acaattctgt tttcggaaag
      301 tctcaggctg agtattgtat tttttatatt gtacggagga atattatttg tgatgaattg
      361 cctcgagtat tctttcatca taatattatc aagaactcgc ctgtcgggcc cgatcgaatg
      421 aaaatcatcg gttctgaaac tcacgatctt tgatagatct ctttcgtcca tcgctgcagc
      481 taactgttca taacgctggc tcaagatcct ctttacagaa tcaacggcaa gcgagtcctg
      541 cgagtacgca taaccggagc atattagcgt caataaagca agggcagact tcagatgcat
      601 atttgcgcat ttatcgttga gaagagcatc aggtgttgga gctgcatttg tcgcatctct
      661 gtaaatatat gaattgggcg ccgctcccat tatacctgaa tgcggtcggg ctggaagaaa
      721 tcttcattcc cgctgtggac acaattgccg gttcgcgttt ttcagtgaat gtgaagatga
      781 ggacttctgc acatagaatg ataagcgttt taccttcgcg cggtgatgga gatcaaccgc
      841 agcttataga acggttacgc ggaatcgtaa atcatgaaat taatctgaat gatctaaaat
      901 aaattaacat ggaaattaaa agagttggca cccagccttc ggcgaaggga ccagaagatt
      961 ggttcactgg cgcggttcgt attgatgcgt tattccagcc caatgagtct cgacgtgccg
     1021 ccgcagccac tgttacattt gaacctgggg cccgcaccgc atggcataca catccgctcg
     1081 gccaaacgct catcgttatt tccggttgcg gctgggtgca gcatgaaggc ggaccggttg
     1141 aagagattca tccaggcgac gtcgtgtggt ttgacccgaa cgaaaagcac tggcatggtg
     1201 caacacaaac cacggcaatg acgcacatcg cgatccagga aaatctaaac ggtaaagttg
     1261 tagaatggat ggaaaaggta agcgatgcag agtaccggaa atgatgcggg tttgtttttg
     1321 tcctaaaatc atcgtccgta catgaatggc gacacatgga acaacctgat actaagcgtt
     1381 agaaaaaaag taagatacgt gtccttgtcg tttggatcag cttttagaat atttggtttc
     1441 actttttccg gtcttatcga agttgaatac aactgctttg ccagcgcagc ctggtcaggc
     1501 ggaagatatt tatcaaacaa attcgggtct atatacgtcg tgctgatatc gtctatgtaa
     1561 tcggtaaagg tgtgacgcat ggccagaccg ccggtaagcg cccacttatt ggtgtagtcg
     1621 agatagtact tcagtgctat agtgatcgga atgtaaagct gcgtcagttt gtattcatga
     1681 cggtcggggt attctgcaaa ctcctggcct tccaaatgca ggtgctgaac ttcgttccat
     1741 tgaccacccc atagtttttc gggtttgaag tgaaagacgc cgagccccac gccaagcacg
     1801 ggagcaagcc ggtcaatttc ataggtcttt tggaaaagca tcagcggata aatatctgca
     1861 ctcacataag cttcccaaat gttcgatctg aaatttccat tccggtatat ccgccaccgt
     1921 tcctggtccc cggtatttgg tatcaggctg tcaaagccac agacccaggt gtaattgaaa
     1981 ccggcccgga taccataatt tggattcaca ttgtaacatg cgctggctcc aaatgccggc
     2041 ctgagcgtgt gaaaagtata atctttaaac gttccaccaa tgccaggcgt tccgccaaga
     2101 tccccttcaa aattattcgc gccgacagtt acactgaatt cccatgtatc atacagaccc
     2161 ctgagttcag ggtctccacg cggattgccc aacttctgtg caaatgatgt agaagcggtc
     2221 agcaacacga gcaagagtaa acaggatttt tcgcagtgtt taaactccat agaggcaccc
     2281 tcggatcttt tggtctttgt aaaaatagag aaaaatctca tttacaaggc agcgtcatgt
     2341 aaatatgttt tatcccgtct tctatatacg tgtcgccaac cg
//
LOCUS       DASQJI010000593         2972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1610387,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000593 DASQJI010000000
VERSION     DASQJI010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610387"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VEV83_16160"
     CDS             complement(<1..212)
                     /locus_tag="VEV83_16160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46713.1"
                     /translation="MRSRRITLLLVLLFFHVCSFEQDETVDSLKTVLSTLGDSPQKVD
                     LLLQLSQANQSTSLTDAVDYASSARDL"
     gene            complement(338..>2972)
                     /locus_tag="VEV83_16165"
     CDS             complement(338..>2972)
                     /locus_tag="VEV83_16165"
                     /inference="COORDINATES: protein motif:HMM:NF037085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HYK46714.1"
                     /translation="IWFANTDTVIPYVARGNYGGNSTTFTLTLTGDFFSPNSVVYLRD
                     QPLVTTIISPTQATAIVPGFTGNPLIRMYTPPVSATLLDGGFSNGINILSIRKKKVYV
                     IADNKSKLYGEVMPQFTAHVLVDSIPLGNTTLTLNDIGLAGNRLQFTSTANTLSDATN
                     YKISPFMSPPLDTSNDADQALDELYSYIFTDGILTINKLPLTITPNDRTITYGDSVSG
                     ITFKYDLGSTKIPDSNLHVIQNNLVLEHQTSVVRNTVALVDGKTISNDFSFSNLGFIA
                     SGKTIVSGKTIVSGKTISNNFNVVTLSSDIFNNYLPTGSDLVNGKTISSGKTISNGKT
                     IVSGKTISSSSAIFNSSVGDSASSDNTIVILDSGDVNAGVVSTFIPINLLTGLSVGQS
                     SIIPGAFFTADFFSRDFDIHYAQGKLNVLPAGLKVKANDTSKVYGGPDPSLSYTVSGL
                     GYLDDSTVVSGVVLTTDTGRNATAGQHAIVPSGGTAPNYTLIYVNGILTVKKAPLTVK
                     VNDTTRVYGDPNPAFRFTYTGFVYDDNSSSISTPPSVSTASQTANVGVYDAVPSGGSA
                     ANYKFTTYINGKLTITPAPLTVKADDKIIFQKDKLPTLTSTYTGFKNNDNASNTFSAG
                     PFYTVTPLYSGAAGTYTITPYGIVQIRVPNNYTLSYLSGTLYVNPKGSGAKNVKPSLD
                     CVDTVVNNANGFTYVAHFSWYNPNATVVNVPLGADNFIATTGSYGGQLPTVFNPGTGQ
                     FSILFKGQKMQWNLTTYNGSQKTAQASEASASSGRCSSQQIASFQSSGMQATADNSGK
                     LTAFPNPTHDRVTLFVGSAKVSLQDIIVIDAAGKVLPTKGFQRASVETVELNLASFTN
                     GIYFIKVKTADGTKMFRIVKM"
BASE COUNT          759 a          655 c          695 g          863 t
ORIGIN      
        1 agatcccggg cagaacttgc ataatcaact gcatctgtaa gtgaagtgct ctggttcgcc
       61 tggcttaatt gcaataacag atcgaccttt tgaggggaat cgccgagcgt ggataagact
      121 gttttcaggc tgtcaactgt ctcatcttgt tcaaaggaac agacgtgaaa aaaaagcagt
      181 accagtagta atgttatacg tcggcttctc atttacaaac tcaaacagtg cgtaaattag
      241 accttttttt gctattttgg ttaaggtcaa ctgtctgcta taaaacgcaa aaagagggaa
      301 agctgttgtt ccctcttttt acgatgcggt ttgcacctta cattttgacg atcctgaaca
      361 ttttcgttcc gtccgcggtc tttactttaa tgaaataaat tccattcgta aaggacgcaa
      421 ggttcaattc gaccgtttca accgaagccc gttggaaacc tttagttggt aaaactttcc
      481 ctgcggcatc gatcacaatt atatcctgca acgaaacttt tgcggatccc acgaaaagcg
      541 ttactctgtc gtgcgttgga ttcgggaagg cggtgagctt accactgttg tctgccgtcg
      601 cctgcattcc cgaactttgg aacgacgcaa tttgctgcga actgcatctt cccgatgaag
      661 cgcttgcttc acttgcctgt gctgtttttt gcgaaccgtt gtaggtcgtt aagttccatt
      721 gcatcttttg acctttgaaa aggatactga actgaccggt tcccgggtta aatacagtcg
      781 gcaattgtcc gccatatgag cccgtggtgg cgatgaagtt atcagcccct aatggaacat
      841 tcacaacagt agcatttgga ttgtaccagg aaaaatgcgc cacataagtg aaaccatttg
      901 cgttattcac tactgtatcg acgcaatcaa gagatggttt tacattcttt gcgccactac
      961 ctttcgggtt cacatacaac gttccgctca aataactcaa tgtatagttg ttgggtaccc
     1021 ttatctgcac aattccataa ggtgttatcg tgtaggtgcc ggctgctccg ctatataaag
     1081 gcgtaacagt ataaaacgga cctgcactga acgtgttcga cgcgttgtcg ttgttcttaa
     1141 agccggtata tgtggaggtc agcgttggca atttgtcttt ctggaatatg atcttatcat
     1201 ccgctttcac cgttagcggc gccggcgtga tcgtaagctt tccgtttatg taagtcgtga
     1261 acttataatt agctgccgat cctcctgaag gtactgcgtc gtatacacct acattcgctg
     1321 tttgggatgc cgtggaaaca gaaggcggcg tgctgatcga agaactatta tcatcataaa
     1381 cgaatccggt atatgtaaat ctgaacgccg gattcgggtc tccgtaaaca cgtgtggtat
     1441 cgttgacctt cacggtaagt ggcgccttct ttacagtgag tatcccatta acataaatca
     1501 aggtgtagtt aggcgcagtt ccgccgcttg gcacgattgc atgttgccct gcagttgcgt
     1561 tccggccagt gtcagtagtt aggacaactc cgcttacaac tgttgaatcg tcaagatatc
     1621 ccaatcccga tactgtgtaa ctcaacgacg gatcgggacc accgtagact ttggaggtat
     1681 cgtttgcctt aaccttcaaa ccagcaggaa gaacatttag tttgccctgt gcataatgaa
     1741 tatcaaaatc gcgcgagaag aaatctgccg tgaagaatgc gccgggaatt atagaagatt
     1801 gaccaacgga aagacctgtt aagagattta tcggaatgaa tgtagacaca acgcctgcat
     1861 tcacatctcc tgaatccagt atcacgatgg tgttgtctga agaagccgaa tctccaacgg
     1921 agctgttgaa gatcgcgctg ctgctcgaga tcgttttccc gcttacaata gtcttcccat
     1981 tactgatcgt ctttccgctg gaaattgttt ttccatttac gagatcactt cccgttggaa
     2041 gatagttgtt gaaaatgtca gagctcaggg taacaacgtt gaaattgttt gagatggttt
     2101 tgccgctgac aattgtttta ccgctcacaa tggtttttcc gctcgcaatg aatccaagat
     2161 tggagaatga aaaatcattc gagatagttt tcccatctac aagtgcaacg gtattccgaa
     2221 ccacggatgt ttggtgttcg agtaccaggt tattctggat tacatgcaga ttactatcag
     2281 gaatttttgt tgaccccaaa tcatatttaa atgttatccc cgaaacgctg tcaccgtatg
     2341 tgatcgttct atcgttcggc gtaattgtca acggaagttt gttgatggta agaattccgt
     2401 ctgtgaagat ataagaatac agttcatcca gtgcctggtc agcgtcgttc gaagtatcca
     2461 gtggcgggct catgaacgga ctgatcttgt agttcgttgc atcgctgagt gtattcgctg
     2521 tggatgtaaa ctgcagcctg tttcctgcga gaccaatgtc attcagtgtg agggtggtat
     2581 taccgagtgg aatgctatcg accaaaacat gcgcagtgaa ttgcggcatt acctctccat
     2641 acaatttgga tttgttgtct gcaatcacat aaactttttt cttccggata cttaagatat
     2701 tgatgccgtt cgaaaatcca ccgtcaagca gcgttgctga taccggaggc gtgtacatcc
     2761 ttatcagtgg attacccgta aaaccaggca caattgctgt ggcttgtgtg ggactgatga
     2821 tcgttgtaac gagcggttgg tcacgcagat aaacaaccga attcggacta aagaaatcac
     2881 ctgttaatgt taatgtgaac gtggtggagt tgccgccgta attcccgcgg gcaacgtaag
     2941 gtatgacagt gtcggtgttg gcgaaccaaa tg
//
LOCUS       DASQJI010000594         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_535401,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000594 DASQJI010000000
VERSION     DASQJI010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535401"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VEV83_16170"
     CDS             <1..324
                     /locus_tag="VEV83_16170"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HYK46715.1"
                     /translation="AEVDKSDFEKIREIHLKVGVLSCIEPEILMNVFSIMIADTPFQN
                     AELVIDVVEVHAQCKNCGCSFRVGKYKFVCPACGEPVGNVTQGKELLIHKIILEEPEH
                     EEVNQ"
     gene            305..1030
                     /gene="hypB"
                     /locus_tag="VEV83_16175"
     CDS             305..1030
                     /gene="hypB"
                     /locus_tag="VEV83_16175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HYK46716.1"
                     /translation="MKKLTNKAVGTLKAHDVSISLLKANDMVAELIRDQMKNKNILLL
                     NLVSSPGSGKTCLLEETIKRLRDKVKIAVLEGDLETERDADRIRRHGTKALQIVTGGT
                     CHLEAQMIAQALPSLGLNDVEILFIENVGNLVCPASYDLGEDIRVTLVSCTEGDDKPK
                     KYPSMFLTTDIMLVTKSDLLPYVPFSVDAAIQDAHEVNADIQTFLLSALKGDGMDQWC
                     EWLMEKFHEKKESKLVLLEELNL"
     gene            1053..>1611
                     /locus_tag="VEV83_16180"
     CDS             1053..>1611
                     /locus_tag="VEV83_16180"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HYK46717.1"
                     /translation="MTFHLHIKGRVQGVGFRPHVYRSALKKNVFGYVNNGADGVHVIF
                     NHTCRTNAETFVEELLHRAPSRSIIQSYLLQEADEQNFNRFSICVGEDDAEPDLLISP
                     DFAMCGQCRDEFHDKTNRRYQYPFITCTICGPRYSVMSELPYERHLTTMSHFHQCAQC
                     LDEYRDANDRRYFSQTNSCASCGVHL"
BASE COUNT          475 a          322 c          393 g          421 t
ORIGIN      
        1 gcggaagttg ataaaagcga ctttgaaaaa atcagggaga tccatttaaa ggtcggcgta
       61 ttgtcatgta tagaaccgga aatattgatg aatgttttta gtattatgat cgctgacaca
      121 ccttttcaaa atgctgagtt agtcatcgat gttgtggaag tgcacgctca atgcaaaaat
      181 tgtggctgca gcttcagggt cgggaaatac aaatttgttt gcccggcgtg cggagagccc
      241 gtggggaatg tcacgcaggg gaaagagctg ttgatacata aaataatttt ggaggaacca
      301 gaacatgaag aagttaacca ataaagcggt gggcacatta aaagctcatg atgtttcaat
      361 aagtttattg aaagctaatg atatggttgc cgaattgatc cgggaccaaa tgaaaaacaa
      421 aaatatcctc ctcttaaatc ttgtctcgtc gcccggcagt ggcaaaacct gcttgctgga
      481 ggagactata aaaagattac gggataaagt aaaaatcgca gtgcttgagg gcgatcttga
      541 aactgaacgc gatgccgatc gaattcgtcg gcatggcacg aaagctctgc agatcgtaac
      601 gggcggaacg tgtcatctcg aagcgcagat gatcgcgcag gcattgccat ccctgggact
      661 gaatgatgtt gagatacttt ttatcgaaaa tgtaggcaac cttgtatgcc ctgcgtcgta
      721 tgacctcggg gaagacattc gcgttacgct ggtctcctgc accgaaggcg atgacaagcc
      781 aaaaaaatat ccaagcatgt ttctcacaac ggatattatg ttggttacaa aatcagacct
      841 tctgccatat gtgccttttt cagttgatgc cgcaatacag gacgcccatg aagtgaatgc
      901 cgatatacaa acatttttgt tatcagcatt aaaaggtgac ggcatggatc aatggtgcga
      961 gtggctgatg gaaaagtttc atgaaaagaa ggagtcaaag cttgtgcttt tagaagaact
     1021 gaatttataa acccgcattt cgaattacaa cgttgacatt tcatcttcac atcaaaggac
     1081 gtgtacaggg agtaggcttt cgcccgcatg tttacagatc tgcgctgaaa aaaaacgtat
     1141 ttggatatgt aaacaatgga gctgacggcg tgcacgtgat attcaatcac acatgccgaa
     1201 cgaatgcgga aacgtttgta gaagaactcc ttcaccgcgc accttcgcgc tcgatcattc
     1261 aatcttattt attgcaggaa gctgatgaac agaacttcaa tagattttct atttgtgttg
     1321 gggaagatga tgcagagccc gatttattga tctctcccga ttttgcgatg tgtgggcaat
     1381 gccgggatga atttcacgac aaaacgaaca ggcgatatca atatccgttc atcacctgca
     1441 cgatttgcgg cccccgatat tctgtgatgt cagagttgcc gtatgaaagg catctcacga
     1501 caatgagtca ttttcatcaa tgcgcgcagt gcctggatga ataccgtgat gcaaacgatc
     1561 gccggtattt ttcacaaacg aattcgtgcg caagttgcgg agttcacttg t
//
LOCUS       DASQJI010000595         4444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2993453,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000595 DASQJI010000000
VERSION     DASQJI010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2993453"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1570
                     /locus_tag="VEV83_16185"
     CDS             <1..1570
                     /locus_tag="VEV83_16185"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK46718.1"
                     /translation="NPNSKVEPSKRGMYAGVIEKIPYLVDLGITAVELLPVFQFDEQD
                     CLKGLVNYWGYCPVSFFAPHQGYSSSKDPLHVLDEFRDMVKAFHKAGIEVLLDVVFNH
                     TAEGNHEGPTFSFRGIDNIVYYILEDDKNFYSNFSGTGNTLNANQPIVRRMIIDSLHF
                     WVSEMHVDGFRFDLASILSRDEKGRPIEDPPVLWDIESDPALAGVKLIAEAWDAAGLY
                     QVGSFVGDSWKEWNGRFRDDVRSFIRGDEGVVSNLVTRLVGSPDIFGHQEREPEQSIN
                     FVTCHDGFTLNDLVSYNHKHNEANGEDNRDGTNDNFSWNCGIEGPTDDPAIESLRNKQ
                     VKNFLALTLASIGAPMILMGDEVRRTQYGNNNAYCQNNELSWFDWSLLEKHADIHRFL
                     KHLIHVRLRRDAAQQEYSMSLNQLLRKRLVEWHGIRLFEPDWSNHSRSIAFTIKSLSG
                     KMMMHCMLNAYHQPLEFELPVLPPGGEWKRWIDTSLASPADICNWNEVAITVEQKYLV
                     DSRSVVILIARLHA"
     gene            1635..2297
                     /locus_tag="VEV83_16190"
     CDS             1635..2297
                     /locus_tag="VEV83_16190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46719.1"
                     /translation="MRNIFSAFLITLAIISGTGCGSSSKISIIGSWVDKEKIQGTPNN
                     GVFIVVVTQNMAARSTIENDLAAAAKANGIRAVTSLAVFTPVTGVADSIVIAALLRKI
                     DESKCTAILTVTMIDSKSETKYHPSSEYSYDPYSHYPYYGNFGTYCSYSLGSYYSPGY
                     YTTNNTYYLESNLYAYPGQQILFSVQTKAVNPDDINKGSKRFTETLIEELKSNGLLKK
                     QS"
     gene            complement(2326..2814)
                     /locus_tag="VEV83_16195"
     CDS             complement(2326..2814)
                     /locus_tag="VEV83_16195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46720.1"
                     /translation="MKLKIIILALLFSGAVDVAYSQISDAEAEAVINLLGVQKREAIA
                     KLVPVAGKDSAAFWKIYDEYQAENKKTAKDRLALYERTAKAYNDMTPSVADSLSRQYF
                     TNRIEQEKSLEAYYQKIKTATNSVVAFEFYQAEIYILTQLRAQIMQQIPTYGQLVSAS
                     KK"
     gene            complement(2968..4134)
                     /locus_tag="VEV83_16200"
     CDS             complement(2968..4134)
                     /locus_tag="VEV83_16200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46721.1"
                     /translation="MKSKHWFRAPFLLFAFVLLSLFALAQKKKTSLKDSLDGAFDMSD
                     YLIEAHGFIPVPVIITEPALGGFGVALVPVFLNKNPPYIDSVNGQIKVTPVAPNITGG
                     IGLYTANNSWMGAAFRKGTFVKSHIKYTVGSGFANINMAYYRSVGELGEKKFKFDIKT
                     FPLYFDAAKRIGVSHWYAGIKYLFLSTNVEYTGDTVFSPDFVKPNEYKSIVSQFGAII
                     ELDNRDNIFTPNRGIKAHLDVNRADNVIGSDFDYWRLNYYSYAYATLSDKLIGGLRVD
                     GQQAFGDPPFFMLPYIDMRGVPINRYQGNADILTEAELRWDFLRRWSIMLYSGAGKAF
                     DEWNEFGDAKLVVTYGTGFRYFIARKFGLRMGVDIAKGPDTWAYYIVFGSNWLK"
     gene            complement(4153..>4444)
                     /locus_tag="VEV83_16205"
     CDS             complement(4153..>4444)
                     /locus_tag="VEV83_16205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46722.1"
                     /translation="EASYKLFDFYSESEYLLDFESKENNFAYTWSELAINPTDYLRVG
                     IVAQRTRLYETEFDLQRGFLAQYSFWKLTAGAYYFNPFSNDDFLSVSLSVDF"
BASE COUNT         1278 a          974 c         1000 g         1192 t
ORIGIN      
        1 gaatcctaac tcaaaagttg agccgtcgaa aaggggaatg tatgcaggag tgatcgaaaa
       61 aattccttac ctcgttgacc ttgggattac agcggtagaa ctgcttccgg tttttcaatt
      121 tgatgaacag gattgtctca aaggcttagt gaactactgg ggatattgtc cggtttcttt
      181 ttttgcacca caccagggtt acagttcttc aaaagatcct ttgcatgtgc tcgatgaatt
      241 tcgcgacatg gtgaaggctt ttcataaggc aggaattgaa gtactccttg acgtggtatt
      301 taatcatacg gcggaaggta atcatgaagg gccgacattt tcgtttcgtg gtattgacaa
      361 cattgtttac tatatcctcg aggatgacaa aaatttttat tcgaactttt caggcaccgg
      421 taatacactg aatgcgaatc agccgatcgt tcggcgcatg atcatcgata gtttgcattt
      481 ttgggtaagt gagatgcatg tggatggttt tcgatttgat cttgcatcga ttttatcacg
      541 cgacgaaaag ggcaggccca tcgaagatcc tcctgtgctg tgggatattg aatctgatcc
      601 ggctctcgca ggcgtgaagc tgatcgccga ggcatgggat gcagcaggtt tgtaccaggt
      661 cggcagtttt gttggcgata gctggaagga atggaatgga cgatttcggg atgacgtacg
      721 aagttttata agaggcgatg aaggagttgt atcaaatctt gtaacaaggc ttgtgggcag
      781 tccggatatt tttggccacc aggaacgtga accggagcag agcataaact tcgtcacgtg
      841 tcacgacgga tttacattaa atgatcttgt atcgtacaat cacaaacata acgaagcgaa
      901 cggggaagat aaccgcgatg gcacgaatga taacttcagt tggaattgcg gcattgaagg
      961 tccaaccgat gaccccgcaa tagaatcact gcgaaacaaa caggtaaaaa actttcttgc
     1021 gcttacatta gcgtcgatcg gcgcgccgat gatcttaatg ggcgacgaag tacgcaggac
     1081 gcagtatgga aacaacaacg catactgcca gaacaacgag ttgagttggt tcgactggag
     1141 cctgcttgaa aagcatgccg acattcaccg ttttttaaag cacctcattc atgttcggct
     1201 tcggcgtgat gctgcacagc aagagtatag tatgagctta aaccaattgc tcaggaagcg
     1261 gctcgtggaa tggcatggca tcaggttatt cgagccggac tggtcgaacc attcacgcag
     1321 cattgcattc acaataaaat ccctcagcgg taagatgatg atgcattgta tgctgaacgc
     1381 ttatcatcag ccactcgaat ttgagttgcc tgtgctgccg ccgggcggag aatggaagcg
     1441 ctggattgat acatcattgg catcaccggc tgatatttgt aactggaatg aagtggccat
     1501 tacggtggaa caaaaatatt tggttgactc gcggtctgtt gtgatcctta tagcaaggtt
     1561 acatgcctga cattttcaaa gtggctatga ttcgctcaac aattattaat tgaacacaaa
     1621 acaaaaacaa aaagatgcgc aacattttta gtgctttcct aatcacatta gcaattatct
     1681 cagggaccgg ctgcggcagc tcatcaaaaa ttagcataat tggatcatgg gttgacaaag
     1741 agaaaatcca gggcacgccg aacaacgggg tcttcattgt ggtagtaact caaaacatgg
     1801 ccgcaagaag tacaattgaa aatgacctcg ccgcggctgc taaggcgaat ggtatcaggg
     1861 cggttacaag tctcgctgtt ttcacaccgg tgaccggcgt ggctgattct attgtgatag
     1921 cagcgctgct cagaaagatc gatgagtcga agtgtacagc gatactaact gtcacgatga
     1981 tcgactcaaa gagcgaaaca aaatatcacc cttcatccga gtacagctac gatccttact
     2041 cccattaccc ctattacgga aacttcggca cttattgtag ttattcttta ggcagttatt
     2101 acagtccggg ttactacacg accaacaaca cttattatct cgaaagcaat ctgtatgctt
     2161 atcctggcca gcagatattg ttttccgttc aaacaaaagc ggtgaacccc gatgacatca
     2221 ataaaggcag caagcgattc actgaaactt tgatcgaaga attaaaaagc aacggcctgc
     2281 tgaaaaaaca atcctgagca gcggcagaga tgatttcgtc cgcggctatt ttttcgaggc
     2341 agataccaat tgaccataag tggggatctg ctgcatgatc tgcgccctca attgtgtgag
     2401 gatataaatt tccgcctggt aaaattcaaa tgcgacaact gagttcgtag cagtcttgat
     2461 cttttgataa taggcttcca ggcttttttc ctgttcaatg cgatttgtga agtattgacg
     2521 agacaatgaa tcggcaaccg aaggagtcat gtcattgtat gcctttgccg tacgttcata
     2581 taatgcaagc ctgtcttttg cagttttttt gttctctgcc tggtattcat cataaatttt
     2641 ccagaaagca gccgagtcct ttcctgcaac cggaactaat ttggctatag cctccctttt
     2701 ttgtacgccc agcaaattga tcacagcttc tgcttccgcg tcggagattt gagagtaagc
     2761 aacatcaaca gcacctgaaa aaagtaaagc aagaataata attttaagtt tcatacaaag
     2821 ttttttgcta agaaatacca tccaccgcca attaagaaat atttccgtta ttagtttata
     2881 ctttaacggt aaaatggtga ggtgtgagtt gtgagttgcg ggccagcgat acggaattca
     2941 ccattcacca ttcacaattt acatccctca cttcagccag ttgcttccaa acacaatata
     3001 ataagcccac gtgtccggcc ctttcgcgat gtcgacaccc attctgagtc cgaattttct
     3061 cgcaatgaaa tatctgaaac ctgttccgta tgtcaccaca agctttgcat cgccaaactc
     3121 gttccattca tcaaatgctt ttcccgcacc cgagtaaagc ataatgctcc atcttcgaag
     3181 aaaatcccat cttaactctg cttctgtgag aatatctgca ttgccctggt aacgattgat
     3241 cggcacaccg cgcatgtcga tatacggcaa cataaagaat ggcggatcgc caaacgcctg
     3301 ctgcccatcc acgcgaaggc caccgatcaa cttatccgat aacgttgcat aggcataact
     3361 ataatagttt agtcgccagt aatcaaaatc actcccaatc acattgtctg cgcgattcac
     3421 gtcaagatgc gctttgatgc cgcggtttgg agtaaaaatg ttgtcgcgat tgtcgagctc
     3481 aatgatcgct ccgaactggc tcacgatgct cttgtattca tttggcttca caaaatccgg
     3541 cgagaaaact gtatcaccgg tgtactcgac attcgtactt agaaaaagat atttgatgcc
     3601 cgcgtaccag tgtgatacac cgatccgttt tgccgcgtcg aaataaagcg ggaacgtttt
     3661 gatgtcaaac ttgaattttt tttcgccgag ttcaccaaca cttctataat aggccatgtt
     3721 gatatttgcg aaaccgctgc ccacggtgta tttgatgtgg ctctttacaa aagtgccttt
     3781 cctgaatgct gcacccatcc atgaattgtt tgccgtatac aggccaatac ctcccgttat
     3841 gtttggcgct acgggtgtca cttttatctg accgttgaca gagtcgatat aaggtggatt
     3901 cttatttaaa aacacaggaa ccaacgcaac accaaagcca ccgagtgccg gttcggtaat
     3961 aatgacgggt acgggaataa aaccatgcgc ttctatcagg taatcactca tgtcgaaagc
     4021 accatcaaga gaatctttga gagatgtctt ttttttctgc gccagcgcaa atagggaaag
     4081 caaaacaaag gcaaaaagta agaaaggagc cctgaaccaa tgtttgcttt tcatggctaa
     4141 acaatgacga aattaaaagt ctaccgacaa agagacggaa agaaaatcat catttgaaaa
     4201 aggattgaaa taataagcgc cggcggtaag tttccagaaa gaatattgag caagaaaacc
     4261 acgttggagg tcaaattccg tttcgtataa gcgggttcgt tgcgctacaa tacccacgcg
     4321 caaatagtct gtggggttta ttgccaattc agaccacgta taagcaaaat tgttttcctt
     4381 actttcaaaa tcaagaaggt attcgctttc agaataaaaa tcgaagagct tgtaagaggc
     4441 ttcc
//
LOCUS       DASQJI010000596         3937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2073820,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000596 DASQJI010000000
VERSION     DASQJI010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2073820"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VEV83_16210"
     CDS             <1..195
                     /locus_tag="VEV83_16210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HYK46723.1"
                     /translation="RLIVQNQMGSTSLIQRRMKLGYNRAGRLMDQLEQAGVVGPNLGS
                     KARDVIVKTESELNELLDMI"
     gene            complement(276..926)
                     /locus_tag="VEV83_16215"
     CDS             complement(276..926)
                     /locus_tag="VEV83_16215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46724.1"
                     /translation="MKPITIGIADDYKIFRDGLKLCFNTDPNLAVILEADNGEELMES
                     LKTQQPHIIIMDLNMPLLDGMEATKQIRKKYEQVKILVVTMYDNDKFIIHLMENGAHG
                     YLLKNAEPKEIIKAIYAVMENGYYFNDLVNKALLKKLVMKNNLKPSFNHNIELTEREQ
                     EVLKMICEEKTAAEIGKEIFLSPRSVEGIRTRLIEKVGVRNTAGLVMFAVKNGLAE"
     gene            complement(923..1708)
                     /locus_tag="VEV83_16220"
     CDS             complement(923..1708)
                     /locus_tag="VEV83_16220"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46725.1"
                     /translation="MNVQYLIIIGIGAMLLLIISLLLAFNTSQRKKFQYQQNVQHLKE
                     EQQNELIKAAVRSEEMERHRISEELHDEVGALLSATKLYLGNLHAEKFAGDDASVYHK
                     SLELLDDSIQKVRSISHNLHSGILKELGLNEALHSFTQKLGQAGGLEIVTDLDPNYNS
                     KNPESDISIYRILQELFNNIIKHSKATSIRISSRIHGGHLQFVIEHNGKGLTQEEFER
                     LRYEARGLGLKTIQNRIILLKGKINFEKSGDQNVITLNTPVSA"
     gene            complement(2407..3138)
                     /locus_tag="VEV83_16225"
     CDS             complement(2407..3138)
                     /locus_tag="VEV83_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46726.1"
                     /translation="MNLSLKPSRLGLIVLTNGFAACMLLSCGGSNNSSTSSKDSTSEL
                     SDTSAPSFKNGFCAGDTMANEPIAQFGDSAFSKEDSANYYVYESKVYTMEISAKDLWK
                     AFNASDFHHIYFTFSLKNPFKVQVESVADDGSFTEINATTIGDAVPIRSTGSVPSQRM
                     WVRPAKSYYNDVCDFLNGLKNNDHIDLEQNGDNYTIRIKAARAEDHRHNQYISLEGWV
                     FDKGDKSVAQTYSTTLKTNPCPYCR"
     gene            3366..3716
                     /locus_tag="VEV83_16230"
     CDS             3366..3716
                     /locus_tag="VEV83_16230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46727.1"
                     /translation="MKTKILLRSLLILAAWFVSANNGTFAESSLHSSTSNSLMKQEPG
                     QTPGKDQPHQHEDRFYIAQPSDDHEIDTFNSKHHEKRSFWKSIANKLFVMLYDLIVLS
                     PIAAEVLKELLHHV"
BASE COUNT         1107 a          832 c          810 g         1188 t
ORIGIN      
        1 agacttatcg tacaaaacca gatgggaagc acgtcgttaa tacagcgtcg aatgaagttg
       61 ggttataacc gcgcaggacg gctgatggac cagctcgaac aagcaggcgt ggtgggtccg
      121 aatcttggaa gcaaggcaag agatgtgatc gtgaaaacgg aaagcgagtt gaatgagctg
      181 ctggatatga tttaggaatg aggaagtagg cagtaggaag gaggaagcaa ggttttgaca
      241 gaaacgattt caatctgcaa tctgcaatcg ccaatctact ccgccaatcc attcttaact
      301 gcaaacatca cgaggccggc ggtatttctc acaccaactt tttcgatcaa ccttgtacga
      361 attccttcga cggaccgtgg acttaaaaat atctctttgc cgatctctgc tgccgttttt
      421 tcttcacaga tcattttcaa aacttcctgt tcccgttcag tgagttcaat attgtggttg
      481 aatgaaggct tcaggttatt tttcatcacg agctttttca aaagggcttt atttacgaga
      541 tcgttgaagt agtagccatt ttccatcaca gcgtagatcg ctttgatgat ctctttcggc
      601 tctgcgtttt tcaacaaata tccgtgggcg ccattttcca tgaggtgaat aatgaattta
      661 tcgttgtcgt acatggtaac aacaagtatc ttgacctgct catatttttt ccggatctgt
      721 tttgtcgctt ccatgccatc aagcaacggc atattaagat ccatgataat aatgtggggc
      781 tgttgtgttt tcaacgattc catgagttcc tcaccattat cagcttcaag aataacggcc
      841 aggttcggat cagtgttgaa gcaaagcttc agcccgtccc tgaatatctt atagtcatcg
      901 gcaattccaa tggtaatcgg tttcatgcag atacaggtgt gtttaaggta atgacgtttt
      961 gatcaccact cttttcaaaa ttaatttttc cctttaataa tataatacgg ttttgaatag
     1021 ttttcaatcc gagccctctt gcttcgtacc gcagcctttc aaattcttcc tgcgttaatc
     1081 ctttcccgtt atgctcgatg acgaattgta aatggccgcc atgtatgcgg gaacttattc
     1141 tgatgctggt cgctttgctg tgtttgatga tgttgttgaa gagttcctgc aggatgcgat
     1201 aaatacttat gtcgctctcc ggattttttg agttatagtt tggatcgagg tcagttacaa
     1261 tttccaggcc gccggcctgc ccgagctttt gcgtgaagct atggagggct tcgttgagcc
     1321 ccagttcctt taagatgccg gaatgaagat tatgagagat ggagcggacc ttttgaatag
     1381 aatcgtcgag cagctcgaga gacttatgat atacagaagc atcgtcgccg gcaaattttt
     1441 cggcgtggag gttgccaagg taaagcttcg ttgcggagag cagggcgccc acctcgtcgt
     1501 gcagctcttc agagattcga tgacgttcca tttcttcgct tcgaacggct gctttgataa
     1561 gttcattttg ttgttcttct ttaaggtgtt gaacgttctg ctggtactgg aattttttgc
     1621 gttggcttgt gttgaaagcg agtagcaggc ttatgatcag taagagcatt gctccaattc
     1681 caattattat cagatattga acgttcatgt ttctaatttc cctctggttg aaaaagccct
     1741 ggctatgaaa agacaaaaaa ttacaaagct tacatcagga acataccaaa tattatgagc
     1801 gaattcactc tcggggtctg gaaggtattg ataaaataga tagacgaaaa aatttactga
     1861 ttcataaatg gccagcccgg aaatgattaa gaggtagctg tcaaatgcta caaacgcctg
     1921 ctctgcgcga ataagtttta taagatacgt aatacaaaaa aagagaagaa tgaaactttc
     1981 gcagacgtga agcggagaat tcagagtcag aaatctttta cttacggaaa gataaatccc
     2041 ggcagctatc acatagatgc ttaagaaaat gcgcaatctt cttattgaaa ataattccac
     2101 cgccttttga aagaaaaagc taaagaagat aattctgcaa accgaattta agttatacaa
     2161 atagttgttg ttcttcaaaa aatcgggcat gcacggtcta aatctccaac ttacgtcagc
     2221 catagtattc aataaaaggg ctgtcaaaag gtaagcggca attattgcca taaccttatt
     2281 attccgactt ttcgcaatga agacgtacag cggtattaaa ggagcccata cctctgacca
     2341 gtttaaaagc tcgatgccta tcgaacgcaa gctgcccacg gaattaatat ttcaggaaag
     2401 aaacttttac cggcaataag gacaaggatt tgtttttaga gttgttgaat atgtctgagc
     2461 tacgctttta tcacctttat caaataccca tccttccagg cttatatatt ggttatgacg
     2521 gtggtcttca gcccgcgccg ctttaatgcg gattgtgtag ttatctccgt tctgttccag
     2581 atctatatgg tcgttgtttt taagtccatt taaaaaatca caaacgtcgt tatagtatga
     2641 tttggccggg cgaacccaca ttctttggga gggcaccgaa ccagttgacc ttattggaac
     2701 ggcatctccg attgttgtgg cgttaatttc cgtgaaactg ccgtcatcag cgacgctctc
     2761 aacttgaact ttaaacggat ttttcaaaga aaatgtaaaa tatatatggt gaaagtcaga
     2821 cgcattgaat gccttccata aatcctttgc agatatttcc atcgtatata ccttggattc
     2881 gtaaacataa taattcgcac tatcctcttt actgaatgct gagtcgccaa actgggctat
     2941 tggttcatta gccattgtgt ccccggcgca aaacccattc ttaaaagacg gcgccgatgt
     3001 gtcgctcaat tcgctcgtcg aatcctttga cgacgtggag ctattgtttg atccgccgca
     3061 ggataataac atgcaagcag cgaaaccatt cgttaagaca atcaatccca gtctagatgg
     3121 ttttaatgaa aggttcataa catgaagttt tgaaagttta gtaagttttt accgaatcta
     3181 ttaactcttt cttactcgca caaacttctt tgcgtatttc tacgcatcgt ccacaaaaac
     3241 gtatttctac gcatacataa gcatgcttta aacgcactct tacgcaatct tttttttgcg
     3301 tggtttctac cttgatatag gggtacccgg agagacaatt ttggttcatg acaaaacaaa
     3361 agatcatgaa aactaaaatc cttctccgct cgcttttaat cctcgctgca tggttcgtat
     3421 ctgctaacaa cggaaccttt gctgaatcca gcttacacag ttctaccagc aactcactaa
     3481 tgaaacaaga gcctggtcaa acacctggaa aagatcagcc gcatcaacat gaagatcgtt
     3541 tttacatcgc acaaccgagc gatgaccatg agatcgatac gttcaattca aaacaccatg
     3601 aaaaacgcag tttctggaag tccatcgcca acaaattatt tgtgatgctg tatgacctca
     3661 ttgtgctcag cccgattgca gccgaagttt taaaagaatt attgcatcat gtatgaggac
     3721 ggttatgtgg ttaactggtt tattagttta tttaggatag gaattaggat ttcacgattt
     3781 gacaaattca cattcacaat tcatagttca catttgacct ccacaattcg ccattcacct
     3841 acctttaccc tccatgcaac ttgcatcatt cctcgcaaag cgaattgcct ttaacaacca
     3901 gcattctttt tcaaggttta ttattcgtct tgccacg
//
LOCUS       DASQJI010000597         7225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2687250,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000597 DASQJI010000000
VERSION     DASQJI010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7225
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2687250"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VEV83_16235"
     CDS             <1..619
                     /locus_tag="VEV83_16235"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46728.1"
                     /translation="QGIIDKLGAAFALSSCITIGLVAVGLMGYSNSIARDRDKGVFQR
                     LRVAPMPSWCIMTSRLIVQLLMILLLTILVFIAGNNIDHITLTPVGYALTFFTAIVGG
                     AVYLGLGQLIVGLIQNPETVNSTSRLVYFLFIMVGMFGEFGILGEQVKQIVIWSPYGT
                     VKRVIAAGMQPSTWDSETSMALLATIGYAAAFAVIGIKKFKWSNK"
     gene            complement(676..1101)
                     /locus_tag="VEV83_16240"
     CDS             complement(676..1101)
                     /locus_tag="VEV83_16240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46729.1"
                     /translation="MKKITVLLAVCIAASIGSKAQCDKTMKWTSSKSDFLDTAGNFQR
                     SNAETVDVTTTPKKISIVRNNSDKQLMSGDVTSFSCNWKDKKNGKASIKAVLVEPGGK
                     TRNATITIEEVNGKTTILLEAPEENTKIRLNVDSYEEAN"
     gene            1503..1796
                     /locus_tag="VEV83_16245"
     CDS             1503..1796
                     /locus_tag="VEV83_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46730.1"
                     /translation="MKKQPSIAFCIIMDAIGYATYAIPFFGEIGDVIWAPISAIIFYL
                     SFGGTKGAFGAVFNFIEELAPGLDFIPSFTIMWFLQGASRRKKTLAVKPSRLN"
     gene            1979..4384
                     /locus_tag="VEV83_16250"
     CDS             1979..4384
                     /locus_tag="VEV83_16250"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46731.1"
                     /translation="MFRNYLTVTLRNLWKHKIFSAINILGLSIGLACCVLIFLLITHE
                     LSYDKFNVNAANIYRLTSVAEGPDGLTNLAVTPAPWGPLMKKDYPEIKNYVRILKPDK
                     SLVGVKGEEHFYENDLLFCDSTFFDVFSFQLLRGDKQALYKPNSVILTKEMANKYFPR
                     DATNVIGKTIELSSFGRDLQLEVTGIVNDAPANSHFTFSALVSMQTLGDLSTLWSFHM
                     FQTYLLLNNGVSTAALESKYPGFVKKYILNNPAADGKQEIHLQPLTDIHLHSQMTGEL
                     GENGDITYVYVFTGIALFILLIACFNFTNLSTARSIARAKEVGLRKVIGAQRKQLMWQ
                     FLGESVLVAVVALIVAVIIVAAVLPFFNQLAQTNLKVGAGNTLQVAGFLLLLVVFAGI
                     LSGIYPAAVLSSFRPVEVLKGKFQRSLQGLSARKFLVTLQFAISIILISGTILIYQQL
                     KFMQEKKLGFEKNDMMIISLPRSADSSTLAGFKSSLLKNPAVSSVAAASNVPGIFIPV
                     NQVNTSDNNSANAVSMQMLFTDEAFIKTMQMQVIAGRDFSKDLVTDQTEGFIVNEEAV
                     KKLGWKDPQQAIGKRFQWVQPNVVLKSGKIIGVVKNFNITPLKSPVQPLVMHILPQRL
                     QFLYVRFKPQSVQQITTIAGSDFKQFFPTLAFEYSFLDDKLNSMYSSEKRLGEIVGYF
                     SALAILIACLGILGLSIYSIQQRVKEIGIRKILGANVAGITTEISKEFLKPVFVAALV
                     ACPVAWYGMHKWLENFAYRITIEWWVFLVAGTIALLIALLTVSTQAIKAATANPVKAL
                     RTE"
     gene            4411..5244
                     /locus_tag="VEV83_16255"
     CDS             4411..5244
                     /locus_tag="VEV83_16255"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYK46732.1"
                     /translation="MNLFWADFKEAFTHVAVRYFIFAGIVWALWYVIFKKKILHTKIQ
                     RKFPSGKDYKREIFYSVITMFIFGLVPAVILGTSFRQYTQYYTDIHQHSLLWFWLAFP
                     LTFLIHDAYFYWMHRLMHDPKLFKAVHVVHHKSTNPSPWAAYAFHPFEAVIEAGIFLV
                     FVIMMPVMKIHLFVFFIVMIAYNVYGHLGWEIYPKGFSKNKVGRWINTSVNHNQHHQY
                     FKGNYGLYFLWWDRWMKTIREDYDARFEEVKSRKNNDADLAKLETEKAIIVSASVVEV
                     A"
     gene            complement(5300..6385)
                     /locus_tag="VEV83_16260"
     CDS             complement(5300..6385)
                     /locus_tag="VEV83_16260"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HYK46733.1"
                     /translation="MELGISTFVELTPDPRTGKMITPYERIQNLLDEAELADQLGLDI
                     FAIGEHHRPDYLVSSPATLLAAVAARTKQIKLSSAVSVLSSDDPVRVFQQFALIDLVS
                     KGRAEIMAGRGSFIESFPLFGYDLKDYDELFDEKLRLLVAINDQEKITWKGKHRPPIE
                     NLGVYPRPYQKKLPIWVAIGGTPESVLRAAKLGLPLTIAIIGGEPKRFAPYTEFYRAE
                     YVKAGHDISNLQLCINSHAYIADDSQQAADEFFPIYAYVMSKIGRERGWPPTTRAQFE
                     HMRSPEGSLLVGSPQQVIDKILYEHELFKFTRFMVQFSVGTLPHKQMMHAIELFGNVV
                     APAVKKALTAGTGSAEKTSVDKSGNER"
     gene            6588..>7225
                     /locus_tag="VEV83_16265"
     CDS             6588..>7225
                     /locus_tag="VEV83_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HYK46734.1"
                     /translation="MITDETLKLGKKLWDYHHVNHALEKADCILALGSHDLRVPERAA
                     ELYLQEWAPLIIFSGGLGNLTKGMWTETEADQFAAIAIRMGVPETAMLVENRSTNTGE
                     NILFTQRLLAEKNLHPQSFILVQKPYMERRSYATFKKHWPDKKLIVTSPQISFEEYPT
                     EEIPMEKVINIMVGDLERIKFYPEKGFQIFQEIPVDVWDAYLQLRAQGFEKHL"
BASE COUNT         1921 a         1560 c         1645 g         2099 t
ORIGIN      
        1 gcagggtatt atcgataaac ttggcgcggc cttcgcactt tcttcatgca taacgatcgg
       61 gttggtcgca gttggattaa tgggttattc aaacagcatt gcccgggacc gcgacaaagg
      121 tgtgtttcaa agattacgtg ttgcgcccat gccatcatgg tgtataatga cgagcaggct
      181 catcgttcaa ttgctgatga tcctgctgct gactattctt gtttttattg cgggtaataa
      241 catcgatcac attactctta cgcccgtagg atatgcattg acgttcttca ctgcgatcgt
      301 tggcggcgcc gtctatctcg gcctcggcca actgatcgtc ggcctgatac aaaatcccga
      361 aacagtgaat tcaacgagca ggcttgttta ttttctattc ataatggttg gaatgtttgg
      421 tgaatttggc atcctcggcg agcaggttaa gcaaatcgtt atctggtcgc cttatggaac
      481 tgtaaagagg gtgatcgccg caggaatgca gccatccaca tgggatagtg aaacaagtat
      541 ggcattactt gcgaccatag gttatgcagc ggccttcgca gtgatcggta taaagaaatt
      601 caagtggagc aataagtgaa ttgaaaggtg aaaagtgaag aagaggctga agctctttct
      661 cacgctcacc ctcgcttaat tcgcttcctc atatgaatcg acattcagcc tgatcttggt
      721 gttttcctcc ggcgcctcca gtaagatggt tgtttttccg tttacctctt cgatcgtgat
      781 ggtagcattg cgtgtcttgc cgccgggttc aaccaatacc gccttgatgc ttgctttacc
      841 gttttttttg tctttccagt tgcacgaaaa gctggttacg tcgccactca ttaattgttt
      901 gtctgaattg ttgcgaacga tcgagatctt ttttggcgtt gttgttacat caacggtttc
      961 ggcgttcgaa cgttgaaaat tgccggctgt gtccagaaaa tcggatttcg aggaagtcca
     1021 tttcatggtc ttgtcgcatt gcgcttttga gccaatgctt gccgcaatgc atacggcaag
     1081 gagcactgtt atctttttca taccaaggtg gttttttaat tagagaataa tttgattttg
     1141 ccaaaaagta tatcgtgtca ttcggtgacg acgatattaa tagacgtcaa gtctgacttt
     1201 tattagaaaa actttttggt aagattggag acccggaaaa ttaattgaag gctggaacga
     1261 tattcaaatt acgtcatcgg ttgaatcggc gatctcaata attatgagtg gcacattctg
     1321 cacaccaacc ggaaaatttt tgcagattcc tcgttagaaa gtttcatcct tttgtagaac
     1381 ggatgttcac tcggaatgac agcgtaaacc acagaccttc caactaccgc ccggttgctg
     1441 aaagcaaata acatttcatg cataatattc cggcttaatt tgcgtttcga aaaaaaccca
     1501 aaatgaaaaa acagccttct attgccttct gcataatcat ggatgcgatc ggttacgcta
     1561 cgtatgccat tccgtttttc ggtgagatcg gcgatgtgat ctgggcgccc atttctgcaa
     1621 ttatttttta tttaagtttc ggcggtacca aaggcgcttt tggagcagtg ttcaatttca
     1681 tagaggaact ggcgcccggc cttgatttca ttccatcgtt tacgatcatg tggtttttgc
     1741 agggagcatc gcggagaaag aaaacgcttg cggtaaaacc ctcccggctt aattaaccat
     1801 ggatttataa tttttgtttt ccgccgcatc catgcccgtg cggcatcgca cgatacatgt
     1861 tcgttttcgt acattcaaac acttttcacg agcagtaagc gctttgtttt caaaagcttc
     1921 tggcattggc ataacggttg agcttttctc aggtcgttca tcaactaaaa gcgcatatat
     1981 gttcagaaat tatttaaccg ttaccttaag aaacttgtgg aagcacaaaa ttttttcagc
     2041 cataaatatc cttggccttt caatcggcct tgcatgttgt gtccttattt ttcttctcat
     2101 cactcacgaa ttgagctatg ataagttcaa cgttaatgcg gctaacatat accggctcac
     2161 atctgttgcc gaagggccgg acggtttgac aaacctggcg gtgacaccag caccgtgggg
     2221 gccgttgatg aaaaaagatt acccggaaat aaaaaattat gtaaggattt tgaaacctga
     2281 caaaagcctg gtgggcgtga agggcgaaga gcatttttat gaaaacgatt tgttgttttg
     2341 cgattcaact ttttttgatg tcttttcttt tcagttgttg cggggagata aacaggcgct
     2401 ctataaacca aatagcgtga tcctcaccaa agaaatggcc aacaaatatt ttccgcggga
     2461 tgctacgaat gtaattggca agaccatcga actgagttca tttggaagag acctgcagct
     2521 cgaggtgact ggtattgtga atgacgctcc ggcgaattcg cattttacgt tcagcgcact
     2581 ggtttcaatg caaacactcg gcgaccttag cactctgtgg tcgtttcata tgtttcagac
     2641 gtacctcctg ttgaacaatg gtgtttcaac tgctgcgctc gaatcaaaat atccaggctt
     2701 tgtgaagaaa tacattttaa ataatcctgc ggcagatggc aaacaggaaa tacatcttca
     2761 accactcacc gatattcatt tacattctca aatgaccgga gagctcggcg aaaatggcga
     2821 catcacatac gtttacgttt ttacagggat cgcattattc attcttctca tcgcttgttt
     2881 caattttaca aatctctcta ccgcgcgctc tattgccagg gccaaggaag ttggattacg
     2941 aaaagttata ggtgcccaac gaaaacaact gatgtggcaa tttttgggag aatctgtttt
     3001 agttgcggtc gttgctttaa tagttgcggt gattatcgtg gccgcagtgc ttcctttttt
     3061 caaccaactc gcgcaaacta acttgaaggt aggggcagga aatacgttgc aggtcgcggg
     3121 cttcctgtta ttgctggtag tatttgccgg catcctgtcg ggcatttatc ccgcggcagt
     3181 gctatcgtcg ttcaggccgg tagaagtttt gaagggaaaa tttcaaagga gtttgcaagg
     3241 tctttctgcc aggaaattcc tggtgacact tcaatttgcg atctccatca tcctcatctc
     3301 aggaacgatt ctaatttacc agcagttaaa gtttatgcag gagaaaaaat tgggcttcga
     3361 aaaaaatgat atgatgatca tctcactgcc gcgttctgcc gattcatcaa cactcgcagg
     3421 ttttaagagt tcgctgttaa agaatcctgc tgtaagctcg gtggctgcag cttccaacgt
     3481 gccgggcata tttattcccg taaaccaggt taacaccagc gacaacaatt cagcaaacgc
     3541 cgtttcgatg cagatgttgt ttacggatga ggcgtttatc aagacaatgc aaatgcaggt
     3601 aattgccggc agagattttt caaaagatct tgttacagat caaacagagg gattcatcgt
     3661 gaatgaagaa gcagtgaaaa aattgggctg gaaagatccg caacaggcaa ttggaaaaag
     3721 attccaatgg gtgcaaccga atgtggtatt aaaaagcggc aaaataatcg gcgtcgtaaa
     3781 aaatttcaac atcacacctt taaagtcgcc cgttcagccg ctcgtaatgc atattctgcc
     3841 gcaacgatta caatttttgt atgtgagatt caaaccacaa tctgtgcagc aaataaccac
     3901 aatcgcaggt agcgatttca aacaattttt tccaacactc gcatttgaat acagcttcct
     3961 ggacgataag ctcaatagca tgtacagtag cgaaaaaagg ctcggcgaaa tagttggtta
     4021 cttctctgca cttgccatac tgatcgcctg cctcggaatt ctcggtttgt cgatctattc
     4081 catccagcaa cgggtaaaag agatcggtat caggaaaata cttggtgcta acgttgcagg
     4141 gattacgacg gaaatttcaa aagaatttct gaaacctgtt ttcgtcgccg ccttagttgc
     4201 atgccctgtt gcctggtacg ggatgcataa atggcttgaa aattttgcgt atcggattac
     4261 gatagagtgg tgggtattcc tggtagctgg aacgatcgcc ttgctcattg ctttactcac
     4321 agtgagcacg caggcgataa aggccgctac tgcaaatccg gtgaaagcgt tacgtacaga
     4381 gtgatccgca atagttttta attttgccgc atgaatttgt tttgggcaga tttcaaagag
     4441 gctttcaccc atgtcgcagt acgctatttt atttttgcag gaattgtgtg ggcattatgg
     4501 tatgtgatct ttaaaaaaaa gatccttcat acaaaaattc aacgaaagtt tccgtcgggg
     4561 aaagattata agcgtgagat cttttattcc gtgatcacca tgtttatctt tggtcttgta
     4621 cccgctgtta ttttaggcac ttctttcaga cagtatactc aatattatac cgacattcat
     4681 cagcacagcc tgctttggtt ctggcttgca tttccattga ccttcctcat tcatgacgca
     4741 tacttttatt ggatgcaccg gctgatgcat gatccgaaat tatttaaagc agttcatgtg
     4801 gtacatcaca aatcgacaaa tccgtcgccg tgggcagcat atgcgtttca tccgttcgag
     4861 gctgttatcg aggccgggat ctttttggtg tttgtgatca tgatgccggt gatgaaaatt
     4921 catctctttg ttttcttcat tgttatgatc gcatataacg tgtacggtca tttaggatgg
     4981 gaaatatatc caaaaggttt cagcaagaat aaggtcggcc ggtggataaa tacttctgta
     5041 aaccacaatc agcatcatca atatttcaaa ggaaattatg gcttgtactt tttgtggtgg
     5101 gacaggtgga tgaaaacgat tagggaggat tacgatgcgc ggtttgaaga ggtgaagagc
     5161 cgaaagaata atgatgctga tcttgcaaag ctcgaaaccg aaaaggcgat catcgtttct
     5221 gcctcggttg ttgaagtggc ctaacgctgc cggaaaactc aaaacttaaa cggcagatta
     5281 ttttcacatt tctcattcct catctctcat tcccgctttt atcgacagac gttttttcag
     5341 cggaaccagt cccagcagtc aacgccttct ttacagccgg cgcaacaacg tttccaaaca
     5401 gttctatcgc gtgcatcatt tgtttatgag gcaatgttcc cacgctgaat tggaccataa
     5461 aacgggtgaa tttgaaaagc tcatgctcat ataaaatttt gtctatcacc tgctgcggac
     5521 tgccaaccaa caacgaacct tcaggacttc tcatgtgttc aaattgcgcc cgggtagttg
     5581 gtggccatcc gcgttcgcgt ccaatcttgc tcatgacgta tgcataaatt ggaaaaaatt
     5641 catcggcggc ctgctgcgaa tcatcggcta tataagcgtg tgaatttatg cagagctgca
     5701 agtttgaaat atcatgcccc gcctttacat actcagccct gtaaaattct gtgtaagggg
     5761 caaacctctt cggttctccg ccgatgatag caatagtaag gggcaatccg agtttcgctg
     5821 cgcgcagaac cgattccggt gtcccgccga tcgcaaccca tatcggcaat ttcttttgat
     5881 acggtcgggg atacactcct aaattttcta tcggcggcct gtgctttcct ttccatgtga
     5941 tcttttcctg atcattgatc gcaacaagca atcttaattt ctcatcaaag agttcgtcat
     6001 aatctttcag atcgtaacca aacaatggaa aagattcaat gaatgaacct ctgcctgcca
     6061 tgatctccgc acgtcctttt gaaaccaggt cgatgagagc aaattgctga aagacgcgta
     6121 ccggatcgtc ggagctgagg acgctgacgg cactcgacaa ttttatttgt tttgttcttg
     6181 ctgcaacagc tgcgagtaat gtagcgggag aagataccag gtaatcggga cggtgatgtt
     6241 caccgatcgc aaatatgtcg agccctagtt gatctgcgag ttctgcttca tccagcaggt
     6301 tttggatgcg ctcatagggc gtgatcattt tgcctgtccg cggatcgggt gttaattcaa
     6361 cgaaggtgct gatgcctaat tccatgatgc aaaaataaac gctgaacagt ttgcgttgcc
     6421 gattcatcgt tagggtggct tctacttcgt ggaaggttat atcactcgga atgaccgaga
     6481 gcctcgactg tcatgccgac ctcaggcggc atctgcgacg caatacattg ttggcgttgc
     6541 gtcatccttg ccggtcattc tgcgccattt cttactttgc gcatcttatg atcacggacg
     6601 aaacgctcaa gctcggcaaa aaactatggg attatcatca tgtgaaccat gctttggaaa
     6661 aagcggattg catactggca ttaggaagtc atgacctgag agttcctgaa cgtgcggcag
     6721 agttatatct gcaagaatgg gcgccgctga taattttttc gggcggattg ggcaacctta
     6781 caaaaggcat gtggacagaa actgaggcgg atcaatttgc agcaatagcg attcgtatgg
     6841 gtgttccgga aacggcgatg ctggtggaaa acagatcaac gaacacgggc gaaaatatcc
     6901 ttttcacaca acgattgctt gcggaaaaaa atcttcatcc acaatctttt atactcgttc
     6961 aaaaacctta catggaaaga agaagttatg cgacgttcaa aaaacactgg ccggataaaa
     7021 aattgatcgt cacttcacct caaatttctt ttgaagaata tcccaccgaa gagataccga
     7081 tggaaaaggt tatcaatatc atggtcggcg atcttgaaag aataaaattc tatccggaaa
     7141 aaggttttca aattttccag gaaattcctg tcgatgtgtg ggacgcatac ctacaacttc
     7201 gggcgcaagg gtttgagaaa catct
//
LOCUS       DASQJI010000598         2826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2840014,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000598 DASQJI010000000
VERSION     DASQJI010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2840014"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VEV83_16270"
     CDS             <1..692
                     /locus_tag="VEV83_16270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HYK46735.1"
                     /translation="RQEYIHRSAGLLRIDENGLTTLVNKYSGERVGKSAAAEKKQDLQ
                     PATVENTDDKIIFQQDEAQEKNVLRVLLEYGLNKWDADETIADHIFEELDEFRFDNAD
                     MEYLYELYRRQYAAGFRPTAKTLLYHEEERVRTLVVNVTLFPFELSQRWDEVLENMKV
                     LNRDTSVQDVMMSLNYFKLQKLKRMFEQNQNDIMHSKELNEQLRLMEVHKHLKAIEIQ
                     ITQQLGTVIFK"
     gene            complement(740..1816)
                     /locus_tag="VEV83_16275"
     CDS             complement(740..1816)
                     /locus_tag="VEV83_16275"
                     /inference="COORDINATES: protein motif:HMM:NF024136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3810 domain-containing protein"
                     /protein_id="HYK46736.1"
                     /translation="MRKHREKRWWLAPVVLLAIIILLHLFALQGGWVEKVYSTVLYPV
                     ISSILRIMTGWIPLSLGDIIYALAMIWLIFEIIQFFRHGPSWKRFFMRMRNLLVTCLW
                     IYLVFLVFWGLNYYRYGISYQLHLAPAEYNADDLKKLTSALVVKLNDTRKELDSMHYS
                     YPDNKTIFRSAIAAYDSAQSVYPFLQYRHPAVKEMLSGTVGNYGGFLGYYNPFTGEAQ
                     VDTKVPPFMIPFTTCHEMAHQLGYASESEASFVGYLVVKASNSPVFDYSTYFDLFGYA
                     NSELFERDSTAARQNVRSLDTLVKKDILAYRKFLRDNENPIEPLLTKIYGNYLKAHNQ
                     PQGIESYNEVVGWIVAYYKKYGVL"
     gene            1970..>2826
                     /locus_tag="VEV83_16280"
     CDS             1970..>2826
                     /locus_tag="VEV83_16280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HYK46737.1"
                     /translation="MSKFSEHNFANEKALIRVDFNVPLDKKSLEITDDNRMRAAVPTI
                     NKILTDGGSVILMSHLGRPKEGPEEKYSLKHLLKHLSELLGGKEIQFANDCIGDEAKN
                     KSAALKPGDVLLLENLRFYKQEEKGDEAFAEKLSKLGDVYVNDAFGTAHRAHASTAVI
                     AKFFTPDKKMFGLLMEAEVKAAEQILHSSEKPFTAIIGGAKVSDKILILENLLDHATD
                     IIIGGGMAYTFFKAEGGDIGASLCEEDRVETAKDIMAKADEKNVCIHLPSDSIIADKF
                     ANDANISSS"
BASE COUNT          841 a          599 c          660 g          726 t
ORIGIN      
        1 ggcggcagga atacattcac cgatctgctg gtttactcag gatcgacgaa aacggattaa
       61 ccaccctcgt taataaatat tccggcgaac gtgttggtaa gtcagccgcg gccgaaaaaa
      121 aacaggatct acagcctgcg acggttgaaa atacggacga caagatcatt tttcagcagg
      181 atgaagcgca ggagaaaaat gttttacgtg tgttactcga atatggtctg aacaagtggg
      241 atgcagacga aactatcgcc gaccacattt ttgaagaact ggatgaattc cgttttgata
      301 atgccgatat ggaatatttg tacgagctgt atcgcaggca atatgctgcc ggctttcgcc
      361 cgacggcaaa gacgttgttg tatcacgagg aggaacgggt gcgcacgctc gttgtgaatg
      421 taacgctctt tccttttgag ttaagtcagc gctgggacga ggtgctcgag aatatgaaag
      481 tattgaatcg cgatacgagt gtgcaggatg ttatgatgag cttaaattat ttcaagctgc
      541 aaaaactgaa acgcatgttt gagcaaaacc aaaatgatat aatgcattcg aaggaattaa
      601 atgagcagtt gcgcttaatg gaagtgcata agcacctgaa agcaattgag atccagatca
      661 cgcagcagct tggaacggtt atttttaaat gagatcgcgg cggctttgcg tacgttcacg
      721 atagctgaat aacactcatc taaagcactc cgtatttttt gtaatacgcc acgatccacc
      781 ctaccacttc attataactt tctattccct gcggctgatt atgtgccttc aggtagttac
      841 cataaatttt tgtaagtaaa ggctcaattg gattttcatt gtcgcgcaga aatttcctgt
      901 aagcaagtat gtctttcttc accaacgtgt ccagggagcg aacattttgt cttgctgccg
      961 ttgaatctct ttcaaacaat tctgagtttg cgtatccaaa aaggtcgaag tacgttgagt
     1021 aatcaaacac cggggaatta ctcgctttca cgacaagata accaacaaag ctggcttcac
     1081 tttcactggc ataaccaagc tggtgtgcca tctcgtggca ggtagtgaac ggaatcatga
     1141 aagggggaac ttttgtatca acctgcgctt cgcctgtgaa gggattatag tatccgagga
     1201 acccgccata gttgccgact gttcctgaca gcatctcttt caccgctgga tgcctatact
     1261 gcaaaaatgg ataaacggac tgtgcagaat catacgcggc gatcgcactg cgaaagatcg
     1321 ttttgttgtc ggggtagctg taatgcatgc tgtcgagttc tttgcgggta tcatttaatt
     1381 taaccacaag tgcagaagtc agttttttca gatcgtcagc attatactcg gcgggagcga
     1441 gatgcaattg atagctgatg ccgtaacggt aataattcaa tccccagaag acaagaaaaa
     1501 ccaggtagat ccataggcat gtcaccaaaa gattcctcat gcgcatgaaa aatcttttcc
     1561 aggaaggccc atgccggaag aattgaataa tctcaaaaat caaccagatc atcgccagtg
     1621 cgtaaatgat atcgccaaga ctgagcggta tccagcccgt catgatgcgc aggattgatg
     1681 agatcacagg gtaaagtacc gtgctgtaaa ctttttcaac ccatccgccc tgcagtgcaa
     1741 acaaatgcaa cagtatgatg atagccagta acacgaccgg cgccagccac catctttttt
     1801 ctctgtgctt ccgcatatca gtcgcgaata taaaagtata agctgcaaaa gtttttgtaa
     1861 tagtaattgt caaaacccgg cgcgcctttg gacagtggcc gcttatcttc aacagaactc
     1921 gtttaattta aacgcctgtt cttactttta cagccctcaa tcaaacatta tgagcaaatt
     1981 ctcagaacac aactttgcca acgaaaaagc gcttatccgc gttgatttca acgtgcctct
     2041 cgataaaaaa agtttagaaa taaccgacga taacaggatg agggccgcag tccctacgat
     2101 taacaaaatt ctcaccgatg gaggcagcgt tattttgatg agccatctcg gcaggccgaa
     2161 agaaggtccg gaagaaaaat attcgctgaa acatcttttg aaacatttga gtgaactact
     2221 tggtggaaaa gagatacagt ttgcaaatga ttgtattggg gacgaagcaa aaaataaatc
     2281 agccgcactt aaaccggggg atgttttgct gctggaaaat ttgcgttttt acaagcagga
     2341 agaaaagggc gatgaagcct ttgctgagaa attgtcgaag cttggcgatg tatatgtcaa
     2401 cgatgcgttt ggtacagctc accgtgcaca tgcttctact gctgtgatcg caaaattctt
     2461 tacaccagat aagaagatgt ttggcttgtt gatggaagca gaagtgaaag cggcggaaca
     2521 gatcctgcac agttctgaaa aaccttttac cgcaatcatc ggcggcgcaa aagtgagtga
     2581 caagatactg atactggaaa atctgcttga tcacgccacg gacatcatta ttggcggtgg
     2641 gatggcttat acttttttca aggcagaagg cggcgatatt ggcgcatcgt tgtgcgaaga
     2701 agaccgggtc gaaactgcaa aagacatcat ggcaaaggct gacgaaaaaa atgtgtgcat
     2761 tcatttgccg agcgattcaa ttatcgcaga caagtttgca aacgacgcaa acatctcctc
     2821 ttcgat
//
LOCUS       DASQJI010000599         1894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2687716,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000599 DASQJI010000000
VERSION     DASQJI010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2687716"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VEV83_16285"
     CDS             <1..228
                     /locus_tag="VEV83_16285"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HYK46738.1"
                     /translation="FETTYKLPFTLIADVDTSINKQYGVWVEKDRDGQKFWGTARTTF
                     IIDEKGVVVAKIDQVDTKQHARQLLSYMPGQ"
     gene            complement(298..981)
                     /gene="pnuC"
                     /locus_tag="VEV83_16290"
     CDS             complement(298..981)
                     /gene="pnuC"
                     /locus_tag="VEV83_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015663 - nicotinamide mononucleotide
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015890 - nicotinamide mononucleotide
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HYK46739.1"
                     /translation="MKEFFDVNKEFFNLLGYSMSYIEFAGVVFGLIAVWLSAKALIVS
                     WPIGILNVILAAILYFQVQLYPDMFLQVFFFVTNLVGWWRWANPKPGEEDRKEELKVS
                     YMKRNQLIFTVLISLIGTFILGQFASNLHTWFPNIFSRPSAYPYVDSFITVMSVLTTF
                     YMIEKKIECWIIWIIVDITATILYYVKGVKFYSVEYFIFTIIATYGLMHWIKEYKSYS
                     SLPARYEVL"
     gene            complement(1070..>1894)
                     /locus_tag="VEV83_16295"
     CDS             complement(1070..>1894)
                     /locus_tag="VEV83_16295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46740.1"
                     /translation="MNNFGDHEKLMQSGFEVWGAPAIRSHPDNYFLTQWEKHFKNIRD
                     FIPVCRQLGYKGIIMTSWSRSGQYSTVWETSDDITDLYAIRHVYPITGFNILLAAYSK
                     SLQTRSPLDIPEFIKTYGKEQYGFTEQESASFWKAVTTCPYEINQGKVIAPQDIAVSQ
                     LADSQAIAVKTLYQLQPQKNKEEFEHYRLMADIRMLYLSYQKIEAEVNDPGFSNSKIP
                     SVLGQLKKLLDDARSIDQRFIDLNKSTLYPGELKEENDLRTTKINLLYERLAKERM"
BASE COUNT          555 a          384 c          367 g          588 t
ORIGIN      
        1 ttcgagacga cgtataagct gccttttacc cttattgcgg acgttgatac gtcgatcaac
       61 aaacaatatg gcgtttgggt ggaaaaggat agagacggac agaagttttg gggaacggcc
      121 cgaacaacgt ttatcatcga cgaaaaagga gttgtggtag caaagattga ccaggtggac
      181 acgaaacagc atgcgcggca attgctgtct tatatgccag gccagtaagc acttagttta
      241 ccggaggcaa aatttatgaa tcgatatgcc cattataaac aggcggaaac ttaccaatca
      301 caagacctcg tatcgtgccg gcaaggatga ataactttta tattctttta tccaatgcat
      361 caatccgtaa gttgcaatga tcgtgaagat gaaatattca acactgtaga attttacgcc
      421 ctttacataa taaaggatgg ttgcagtaat gtctactatt atccagatga tccaacattc
      481 aatcttcttt tcgatcatat agaatgtagt aagcacgctc attaccgtga taaaagaatc
      541 aacatacgga tacgcgcttg gcctggaaaa tatgtttgga aaccatgtat gcaagttact
      601 tgcaaactga ccgagaatga aagttccgat cagtgatatc aataccgtaa atatcaattg
      661 gtttcttttc atgtaactga ctttcaattc ttccttcctg tcttcttccc ctggttttgg
      721 attcgcccaa cgccaccagc caacaaggtt tgttacgaaa aagaagacct gtagaaacat
      781 gtcaggatag agttgtacct ggaaatataa aattgctgcc agtataacat ttagaatacc
      841 aattggccag cttacaataa gtgcttttgc ggaaagccat actgcaatta atccgaacac
      901 tactccggca aattcaatat aactcataga gtagccgagc aaattgaaga actctttatt
      961 tacatcgaaa aattctttca ctaacgtttt tgtttaggct tagaagaaaa ctgcaaatat
     1021 tacttcctgt gacgtagcgt tatttaaaaa atactgaagt tctttatcgt cacatccttt
     1081 cttttgccag tcgttcatag agcaaattga tcttagtagt tcgaagatca ttttcctctt
     1141 ttaattcgcc tgggtacagt gtgcttttat ttaagtctat aaatcgttga tcgatcgatc
     1201 ttgcatcatc taaaagcttt tttagttgcc caagaaccga aggaatcttt gaattgctaa
     1261 agccgggatc atttacttct gcttcaattt tttgatagga gagatagagc attcgtatat
     1321 cagccatcaa acgataatgc tcaaattcct ctttattttt ttgcggttgc aattgatata
     1381 aagtttttac agcgattgcc tggctgtctg ccaactgcga tactgcgata tcttgtggag
     1441 caattacttt tccctggttt atttcataag gacatgttgt cacggctttc caaaacgacg
     1501 ccgactcctg ctcagtaaac ccgtactgtt ctttgccata cgttttaata aactctggaa
     1561 tatccaacgg gcttcgtgtt tgcaagcttt tggaatatgc tgccagcaat atgttgaaac
     1621 ctgtgatcgg gtatacatgt cttattgcat acaggtctgt tatatcatcg gaggtttccc
     1681 aaacagtgga gtattgaccc gatcttgacc atgacgtcat gataattcct ttatagccta
     1741 attgcctgca gaccggtata aaatcgcgta tgtttttaaa atgtttttcc cattgcgtta
     1801 gaaaataatt gtcgggatgg ctgcgtatgg ccggagcgcc ccacacttca aagccggact
     1861 gcataagctt ttcatgatct ccaaaattat tcat
//
LOCUS       DASQJI010000600        10087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_231503,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000600 DASQJI010000000
VERSION     DASQJI010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10087
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231503"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..1468
                     /locus_tag="VEV83_16300"
     CDS             56..1468
                     /locus_tag="VEV83_16300"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HYK46741.1"
                     /translation="MPHEAISVFDMLKIGVGPSSSHTLGPWRAGLRFIKTLQQKDLLS
                     SVTSIDVLLYGSLAKTGKGHGTDIAVLMGLCGEDPVTVDVNTIPSRIENIQAEKMLLL
                     NGQRQIQVAVQFLVTESLPFHPNGLSFLASCTNKEISETFYSIGGGFVVKEGEDGSSE
                     CLIDLPFPINTSEDLLHWCRKTGLSISEVVIENENAWRPESETRQGVLNIWSTMRECM
                     YRGCHSKGELPGGLQVRRRAFDLNKKLINGRVYTDYQSWTHAIRDGGNQFQYILDWVS
                     CFALAVNEENASFGRVVTAPTNGAAGVIPAVLQYFIAFCDGDDDEKVIRFLLTASEIG
                     SIFKKEATISAAMGGCQAEIGVSSSMAAAALTECMGGTQRQSLMAAEIAMEHHLGMTC
                     DPIGGLVQVPCIERNTMGAIKAITASQLALQSSPDYARVSLDKVIKTMWDTAKDMNFK
                     YKETAEGGLALNIPLGLKEC"
     gene            complement(1554..1775)
                     /locus_tag="VEV83_16305"
     CDS             complement(1554..1775)
                     /locus_tag="VEV83_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46742.1"
                     /translation="MKQSSKKSSSEKENRKVSDKTSRKSSEIREDKNNSIRNDPGSKL
                     DYPYQQVHDKQFGNQPEFIDRNNDSKDKS"
     gene            complement(1781..1963)
                     /locus_tag="VEV83_16310"
     CDS             complement(1781..1963)
                     /locus_tag="VEV83_16310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46743.1"
                     /translation="MQKKKLEKKQKETQEQAQDIREDLFVEKTSTDEIDSDGSGNAFE
                     ETETVTEDNFDDLSEK"
     gene            complement(1994..3283)
                     /locus_tag="VEV83_16315"
     CDS             complement(1994..3283)
                     /locus_tag="VEV83_16315"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYK46744.1"
                     /translation="MQSIIVVGAGAAGLMGAYELSRRGKNVLILEAANRLGGRIHTVV
                     DGSFSQPIELGAEFIHGDLDITLGLLKEAGIKYHEAKGKMFHLEKGEFKKENNFSDHW
                     DELMKRMGGLKEDLPLGEFLIRFFNDDKYNDLRESVRHFAEGFDLADLSDASTMALYK
                     EWKDEWGTQYRVDGGYQRLIDYLASACKKNGCVIEKNCTVKKVRWAKEQVSVLNMCSQ
                     YFAANKIIVAVPLSVLQAPENDIAYIEFTPAVPEYTKAAAQIGFGTVIKIILQFDETF
                     WAHMKKNVGFIFTDEEIPTWWTQHPRKTSLLTGWFGGPSAAVYKNATDEEILSLALNS
                     LASAFAKSAEVIRQNLKACKITNWSNVPGVNGGYSYSKLESNAAKKIFERPIEQTIFF
                     AGESFYSGNSSGTVEAALVSGREAALKILQLEDSKQA"
     gene            complement(3365..3946)
                     /locus_tag="VEV83_16320"
     CDS             complement(3365..3946)
                     /locus_tag="VEV83_16320"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HYK46745.1"
                     /translation="MNSEIHLAGISGSLRRGSYNTALLNALYPLLPEDVSMEIVSIAG
                     IPLYDADLDMPEAEKRPSIVQHFRDCLSKVDGIVIVSPEYNYSIPGGLKNAIDWASRG
                     TDSPLLNKPVALMGATPGMWGTVRMQTAFLPVFVFLNMKPVLKPEVLIAQAATKFDAK
                     GNLTDEKAKEIIRQKLTALKGMILLEHETHKVF"
     gene            complement(3943..4287)
                     /locus_tag="VEV83_16325"
     CDS             complement(3943..4287)
                     /locus_tag="VEV83_16325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46746.1"
                     /translation="MPQKDEMNTLSEIMNKLTRKGYDKEFRWTPEGFVVDDKAYQPDN
                     LTILKTYRFEGVSDPSDTSILYLIQANDGLIGYSLDAYGVYSNHDDEEGYDNFIRQIP
                     VKNNEEQLLFEL"
     gene            4407..4556
                     /locus_tag="VEV83_16330"
     CDS             4407..4556
                     /locus_tag="VEV83_16330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46747.1"
                     /translation="MIRKLKSGEYRLYSRKKDPKTNKRRNLGTFDSLEAAKKHERDVQ
                     YFKRH"
     gene            4658..4969
                     /locus_tag="VEV83_16335"
     CDS             4658..4969
                     /locus_tag="VEV83_16335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46748.1"
                     /translation="MTEVLSDPSVIIMHTYKINVAGSERGNLLAKLHQPQTVVLSETN
                     SDNWYLIMPAKQAETLLDIASELRRPLKRVTISELRKKYSGRRYRTLLGDSKLVATLF
                     Q"
     gene            complement(4975..5967)
                     /locus_tag="VEV83_16340"
     CDS             complement(4975..5967)
                     /locus_tag="VEV83_16340"
                     /inference="COORDINATES: protein motif:HMM:NF028129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HYK46749.1"
                     /translation="MKKFLLVAAAIFTCLVSHAQSKNLELVHTFHIKSDGWWDYVAVH
                     NDKLYVSHGTQVNILNASTGDSLGVILNTPGVHGIAFDQTKGFTSNGRSNNVTVFNPI
                     TNESITQIQTGQNPDAIMYEPYTRTIITCNGGSYDLSLIDPKTEKVVQTIAVGGKPET
                     AVTDKEGNVFVNIEDKNEIVKVNMKTFKVEARWSLGGAEGPTGLAIDLAAKKLFAGCE
                     KQLVILDINNGNVVAKLPIGAGCDGVVFNPLIGMIYTANGEGTITVIKKIDANNFSVL
                     ENFPTKRGARTITMDMISHFIYLPTAEFDETKKDANGRSLMIPGSFQVLALRFI"
     gene            6107..7339
                     /locus_tag="VEV83_16345"
     CDS             6107..7339
                     /locus_tag="VEV83_16345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK46750.1"
                     /translation="MKFLLVIVFTCIQCMCFSQGHTLNFFIEQAKQNSPLLNQYRNQI
                     LSNRLDSQILRATLKTQVNFLSNNYYAPIIHGYGYDEDITNIANVQGLMQATKQIVGI
                     NNKAAQYETIRLQNEALSDTMKLSEQEIVRTITEQYITAYGDMLTMDFNKDVYDLLSK
                     EEIILKKLTQQSVYKQSDYLTFYVTYQQQELMWLQSQVQYNTDVLTLNYLAGIVDTAI
                     ARLEQPSLADTAAMNFFQSVFYKRFTTDSLRIINEKTLINFSYKPKLNVYTDAGYNSS
                     MHHTLYKNFGFSAGLNLSIPIYDAHQKRLKYSKLDIEERTRLTSREFFLNQYNQQIAQ
                     LKLQLKAIGDLESKINQQITYSYTLIGADNKLLETGDIRIADYVTAINTYLNARNLLN
                     QNLVGRMKIVNQINYWNR"
     gene            7349..8278
                     /locus_tag="VEV83_16350"
     CDS             7349..8278
                     /locus_tag="VEV83_16350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HYK46751.1"
                     /translation="MMKTFFYCSFFFALLVFGCHKKETGGEEEEVAPDQIQTPVTVTS
                     IQYGPLTEYIDLNATASFIQTSVIKSSANGYITKVNIRQGEQVSAGQTAFILKTKEAQ
                     ALGNSINALDSSFHFSGVISIRVHQHGFIAELSHQVGDYVQDGDQLALISDTKGFGFL
                     LNLPYELRRYVSLNKSVQVILPDSTVLDGVVSSFMPTVDSVSQTQAVLIKVNGSASIP
                     QNLIAKVRVVKNAKLNAVTLPKEAVLTDEAQSHFWVMKMLDSTTAVKTEITKGLEVND
                     RVEIIAPSFAPSDKILTSGNYGLADTAKVRVMK"
     gene            8433..>10087
                     /locus_tag="VEV83_16355"
     CDS             8433..>10087
                     /locus_tag="VEV83_16355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYK46752.1"
                     /translation="MNFFTTYKNPLTVLLVLIIMSGAFVYSKLPVSLFPEITFPKIKV
                     IADAGLQPVDKMMVTVTKPLENAIKRVPNLSDIRSITSRGSCEISAFLNWDANVDISK
                     QQIEAQVEEIRNDLPQGVSISVEKMNPSILPVIGYTLETHNNRTPIDMKQIALYTVKP
                     FLSQVPGVSEVRIIGGKQKEYWLRLNIQKMSTLSITPAMLANSLNQTNFIQSSGYLTD
                     YRLMYLTVTDASVHSLDELKEVIISNNSKRIVQLKDIADVTINEGIEYTKINANGQEG
                     LLVAVVKQPNTNLIELSDAVKKKAAELQKILPPGITIRPYYVQADFVNDSIKSVSDSL
                     WIGLVLAIIVAIIFLRSFKASVTILITIPVTICLTLISMYAAGYTLNIMTLGAIAAAI
                     GLIIDDAIVVVEQIHRTHEEHPDEPTTTLVQKAIKYLWPAMVGSSCSTIVIFIPFELM
                     TGVAGAYFKVMTNTMIITLVCSFFVTWLFLPVIYLILTKQKKPTKKQAEKVVEVKKQR
                     WVSFFIFRPYISIIIIIAFAAGIFLILPQLETGFLPEMDEGSIV"
BASE COUNT         2833 a         2292 c         2137 g         2825 t
ORIGIN      
        1 tgtatgtgca atgaaaacgt tgcaaggcag ttatcactaa ctttaccacg atcgcatgcc
       61 acacgaagcc atttctgttt ttgatatgct caagataggg gtcggcccgt caagctccca
      121 taccctgggc ccatggcgcg ccggtttgcg ctttattaaa accttgcaac aaaaagattt
      181 gttgagttct gtaacgtcca tcgatgtttt actctatgga tcgctggcga agactggaaa
      241 agggcacggt actgacatcg cggtgctgat gggcctgtgc ggtgaagatc cggttacagt
      301 cgacgttaat acaattccat cgcggattga aaacatacag gctgagaaga tgcttctgct
      361 taatggccaa agacagatac aggtggctgt tcaattcctt gtaacagaaa gcctgccgtt
      421 tcatccgaac ggtttaagct ttcttgcgtc ctgcaccaac aaagagatct ctgaaacctt
      481 ttattcgatt ggtggaggat ttgttgtaaa ggaaggagaa gacggcagca gcgaatgttt
      541 gatcgacctg ccatttccga taaatacttc ggaggacctg ttgcattggt gcagaaaaac
      601 cgggctctcg atcagcgagg tggtgataga aaatgaaaac gcctggcggc ctgagtccga
      661 aacaaggcag ggtgtattaa atatatggag cactatgcgc gaatgcatgt atcgcggatg
      721 ccacagcaaa ggagaactgc cgggtggttt gcaagtgcga aggcgcgcat tcgatttgaa
      781 taaaaaatta ataaatggac gagtttacac tgattaccag tcgtggactc acgcaattcg
      841 agacggcggt aatcaatttc aatacatcct tgattgggtg agctgcttcg cactcgcagt
      901 gaatgaagag aacgcttcat ttgggcgcgt ggttactgct ccgaccaacg gagctgctgg
      961 ggtgataccg gcagtcctcc aatattttat tgcattctgt gatggcgacg atgatgaaaa
     1021 agtaatccgt tttcttttga ccgcttctga gatcggcagc atattcaaaa aagaggctac
     1081 catttccgca gcgatgggcg gttgccaggc agagatcggt gtgtcgtctt caatggccgc
     1141 ggcagctctc acagaatgca tgggcggtac ccagcggcag tcattaatgg cggcagaaat
     1201 tgcgatggag catcatttgg gaatgacctg cgatccaatc ggcggactgg tacaggtgcc
     1261 gtgcattgaa cgtaacacga tgggcgcgat caaagcgata acggcgtcgc agctcgcgct
     1321 tcagagcagc ccggattatg cgcgcgtgag tttggataaa gtgatcaaaa caatgtggga
     1381 caccgcgaaa gatatgaact tcaaatacaa agaaactgca gaaggcggac tggccttaaa
     1441 tatcccgctt ggcttgaaag aatgttgatc gccgcttgca gtttcatcgc ccggaaaacg
     1501 attgatttgc ttccgccagc cgggcaacga gtgctcctaa cttctttcaa tgactaactt
     1561 ttgtctttcg aatcattgtt ccggtcaata aattcaggct gattgccgaa ctgtttatcg
     1621 tgcacctgtt gatatggata atccaattta cttccgggat cgtttcgaat cgaattgttt
     1681 ttgtcttctc ttatttcact agactttcgt gacgttttat cactcacttt cctgttctct
     1741 ttttcagaag atgatttttt agacgattgt ttcataaaat ttatttttca gacaggtcat
     1801 caaagttgtc ttctgtcact gtttctgttt cctcgaatgc gttgcctgat ccatccgaat
     1861 ctatttcatc ggtgctggtt ttttcaacga acaagtcttc acgaatatcc tgcgcttgct
     1921 cttgtgtttc tttttgcttt ttttccagtt tctttttttg catgcaactt cttttcggat
     1981 atctctgaaa aatttatgcc tgttttgaat cttcgagttg cagaattttt aaagctgctt
     2041 ctctcccact aaccaatgcg gcctcaactg ttcctgatga atttccgctg taaaaagatt
     2101 ctcctgcaaa aaatattgtt tgttcaattg gtcgttcaaa gatttttttt gccgcgttac
     2161 tctcaagctt gctatagcta tagcctccgt taacaccagg tacgttcgac caatttgtaa
     2221 ttttgcatgc cttcaaattt tgcctgatga cttctgctga tttcgcaaat gcggatgcca
     2281 gcgaatttaa tgccaggcta agaatttctt cgtcggttgc atttttatat accgccgcag
     2341 atggcccgcc aaaccagccg gtaagcagtg aagtttttcg gggatgctgc gtccaccatg
     2401 tcggtatttc ttcatcagta aaaatgaacc cgacattttt tttcatatgc gcccagaaag
     2461 tttcatcgaa ttgaagaatg atctttatta ccgtgccaaa acctatctgc gctgctgctt
     2521 tagtgtattc aggaacggca ggtgtaaatt ctatataagc aatatcattt tcaggagcct
     2581 gcaatacact aaggggaacc gccacaatta ttttatttgc ggcgaaatac tggctgcaca
     2641 tgttcagaac actcacctgt tcttttgccc atctgacctt ttttaccgtg caatttttct
     2701 cgatcacaca gccattcttt ttacatgctg aggccaggta atcgatgagt ctctggtagc
     2761 cgccgtcaac gcggtattga gttccccact cgtctttcca ttctttatac aacgccatcg
     2821 tactggcatc ggaaagatcc gccaaatcaa atccttccgc aaaatgcctc accgattcgc
     2881 gcagatcatt atacttatca tcgttgaaaa atcgaataag aaattcaccg agtggcagat
     2941 cttcttttag cccgcccatt cgtttcatca attcatccca gtgatcagaa aaattatttt
     3001 cctttttaaa ttcgcctttt tcaagatgaa acatttttcc tttcgcttca tgatatttta
     3061 ttcccgcttc ttttaacaat ccgagtgtga tatccaggtc tccgtgaata aattcagcgc
     3121 caagttcaat cggttgtgaa aacgaaccgt ccacaaccgt atgtattctt ccacccaaac
     3181 gattcgctgc ttctaatatg agcacatttt ttccgcgcct tgatagttca taagctccca
     3241 ttaaaccggc agcgcctgcc ccgacaacaa taattgattg catatttctc tcttgaaaga
     3301 agatgtgcct taaaaaaatt taaagacagt tttgtgtacc aataaacgaa tcgctctcta
     3361 aagatcagaa cactttgtga gtttcatgct caagaaggat catgccttta agtgcagtaa
     3421 gtttttgcct gatgatctct ttggcttttt catctgtcaa attacccttc gcatcgaatt
     3481 tggtagcagc ctgcgcaatc agaacctccg gtttcaaaac aggtttcatg ttcaggaaca
     3541 caaacacagg tagaaaagcg gtttgcatgc gtaccgttcc ccacatgcct ggcgttgcac
     3601 ccattaatgc cacaggttta ttcaacaacg gtgagtccgt tccgcgcgat gcccagtcta
     3661 tcgcattttt cagcccgcca ggtatggaat aattatattc cggagacacg atcacaatgc
     3721 catctacttt actcagacaa tctctaaagt gttgaacgat agacggccgc ttttccgctt
     3781 ccggcatatc aaggtcggca tcatacaaag ggattcccgc gatggaaacg atctccatcg
     3841 aaacatcttc aggcagcaac gggtacaggg cgttcaggag cgcagtatta taagagcctc
     3901 tccgcaagct gcctgagatt ccggcaagat ggatctcact gttcatagtt caaacaacaa
     3961 ctgttcttca ttatttttca ccgggatctg ccggatgaaa ttgtcataac cttcttcatc
     4021 atcgtgattg ctgtatacgc cgtatgcgtc gaggctataa ccgatcagcc cgtcattcgc
     4081 ctggatcaaa tataatatcg acgtatctga tggatcagaa actccttcaa agcgataagt
     4141 ctttaaaatg gtgagattat ccggctgata agccttatca tcaacaacaa atccttccgg
     4201 agtccacctg aattctttgt cgtaaccttt tctggtgagc ttattcatga tctcgctcag
     4261 cgtattcatt tcatcttttt gtggcataat cgtgttttgc ttctataggt caattcttgt
     4321 accattatat tttgagaggt cctgagcttt tggaaagctg tgcccgtaac atggcataac
     4381 gattgtaaaa ttttcttcaa aagaccatga tacgcaaatt aaaatccgga gaataccggc
     4441 tatattcaag aaaaaaagat ccgaaaacga acaagcgccg aaatttaggc acattcgatt
     4501 ctctcgaggc ggcaaaaaaa catgaaagag acgtgcaata ctttaaacgt cattgatcag
     4561 ctttggtcgg cctggaataa tgtctggaag atgctgctcg tttttaacca cagcttggca
     4621 ctacaattgt gccttaaaaa accaaacccg agaagttatg accgaggtgc tttccgaccc
     4681 ttccgtgatc atcatgcata cgtataagat aaatgttgca ggatccgaac gcggcaacct
     4741 tctcgccaaa ttacatcagc cgcaaacagt agtgctttcc gaaacaaatt cagataactg
     4801 gtatttaata atgccggcca aacaggccga aactctcctt gatattgcat cagaattgcg
     4861 acgccccttg aaaagagtaa ccatatcaga gctgaggaag aaatattcgg gcaggcgata
     4921 tcgtactttg ctcggcgact caaagctcgt ggcgactttg tttcaataat ggctttatat
     4981 aaaccgtagc gccagaacct ggaaacttcc cggtatcatt agcgatctgc cattggcatc
     5041 tttttttgtt tcatcaaact cggcggtggg taaatatata aagtgactga tcatgtccat
     5101 tgtgatcgtt cttgcgccac gcttcgttgg aaaattctcg agtaccgaaa aattgtttgc
     5161 atcgatcttc tttattactg tgatcgtgcc ctcgccgttt gcagtataga tcattcctat
     5221 taatggatta aaaacaacac catcgcagcc agcaccaatt ggcagctttg caacaacatt
     5281 cccgttgttg atatccagta tgacaagctg tttctcgcaa cctgcgaaca atttttttgc
     5341 cgcgaggtcg atcgccaaac cagtgggtcc ttctgctccg cccaacgacc aacgtgcctc
     5401 caccttaaac gttttcatat tcactttcac aatctcgttt ttatcctcaa tgttcacaaa
     5461 cacatttccc tctttatctg ttaccgctgt ctccggctta ccgccaacag caattgtttg
     5521 aacaactttc tctgtcttcg gatcaataag tgaaaggtca taactcccac cattgcatgt
     5581 gattatcgtt cgtgtatacg gctcatacat gatcgcatcg ggattttgcc ctgtttgtat
     5641 ctgggtgatc gattcgtttg ttatcgggtt aaaaaccgtt acattatttg atcgtccgtt
     5701 actggtaaaa cctttcgttt gatcaaaggc gatcccatga acgcctggcg tatttagaat
     5761 gacgccgagc gaatcacctg tagatgcatt taaaatgttg acctgcgtac cgtgagagac
     5821 ataaagcttg tcgttatgca cagccacata atcccaccaa ccgtcacttt ttatatgaaa
     5881 agtatgtacc aactccaggt tctttgattg cgcatgagaa accaaacagg tgaagattgc
     5941 agcagcaacg agaaggaatt ttttcatgtg ggaaatattt cggctccaaa tctatacgga
     6001 aaccttcaga attcaaacag atttgaagcc tacgttcgct tgaatttgta tcgaacaatc
     6061 gaacaggcat caaagcttgc atggcttttg atcttacgtt gacacaatga agttcctgct
     6121 ggttatcgtc ttcacctgta tccagtgtat gtgcttttcg caaggccata cgctgaattt
     6181 tttcattgaa caggcaaaac aaaacagccc tttactaaac cagtaccgca atcaaatact
     6241 ttccaaccgc ctcgacagcc agatattgag ggctacgttg aaaacgcagg tcaattttct
     6301 gagcaataat tattatgcgc cgattattca tggttacggc tatgatgaag acatcaccaa
     6361 tatcgcgaat gtgcaggggc taatgcaggc aactaaacaa atcgtaggca taaataataa
     6421 agcagcccaa tatgaaacga tccgattaca aaacgaggcg ttgtccgaca cgatgaaact
     6481 ttcggaacag gagattgtaa gaaccatcac agaacaatac atcactgcat acggggacat
     6541 gttaacgatg gactttaata aagatgttta cgacctgctc agcaaagagg agatcatcct
     6601 taaaaaacta actcaacaaa gcgtctataa acaaagtgat tacctcactt tctatgttac
     6661 ctatcagcag caggaattga tgtggttgca atcacaggtg caatacaata cggatgtgct
     6721 cactttgaat tatctcgcag gcattgttga cacagccatc gccaggcttg aacagccatc
     6781 actcgcagat acggcggcaa tgaatttttt tcaatctgtt ttttacaaac gttttacgac
     6841 tgacagcctg cgtatcatca acgaaaaaac tcttattaat tttagttata aacctaaatt
     6901 gaatgtttat accgacgcgg gctacaactc ttccatgcat catacgcttt acaaaaattt
     6961 tggattcagc gccgggctga acctttcaat tcccatatat gacgcgcatc aaaagagatt
     7021 gaagtattcc aaacttgata tcgaagaacg gacgcgcctg acgagccgtg aatttttttt
     7081 gaatcaatac aatcagcaga tcgcacaact taaactgcaa ttgaaagcca tcggcgacct
     7141 cgaaagcaaa ataaaccagc agatcacata ttcatacacg ttgattggcg cggataacaa
     7201 attgctggag accggagaca tccgcatcgc ggattatgtt acagcgatca acacgtacct
     7261 gaacgcaaga aacctgttga accagaattt agttggaagg atgaagatcg tgaaccagat
     7321 caactattgg aaccgttaac gatattgtat gatgaaaact tttttttact gcagtttctt
     7381 ttttgcgctt ctcgtgtttg gctgtcacaa aaaagaaaca ggcggcgaag aggaagaagt
     7441 cgccccggat caaattcaaa cgcctgttac cgttacaagt attcaatacg gtccgttaac
     7501 tgaatacatt gacctcaatg caaccgcctc cttcattcaa accagcgtta ttaaatcgag
     7561 cgcgaacgga tacatcacaa aagtcaacat tcggcaagga gagcaagtga gtgctggtca
     7621 aacggctttc atactaaaga caaaagaagc gcaggcgtta ggaaatagca tcaatgcgct
     7681 cgactcgtca tttcattttt caggcgtaat aagtatccgg gtccatcagc acggatttat
     7741 tgctgaactt tctcaccagg ttggcgacta cgtgcaggac ggcgatcaac ttgcactgat
     7801 cagcgacacc aaaggattcg gatttcttct caacctgcca tacgaattgc gcagatacgt
     7861 ttccctcaat aaaagtgtcc aggtgatcct ccctgacagc acagtgcttg atggcgttgt
     7921 tagttcattc atgccgacag ttgattcggt gtcccaaacg caggcggtgc tgataaaagt
     7981 aaacggctct gcttccatcc cgcagaactt aattgcaaaa gtccgcgtcg tcaagaatgc
     8041 aaaattgaac gcagttacgt tacccaaaga ggcggtgctt accgacgaag cgcaaagtca
     8101 tttttgggtg atgaagatgc ttgactccac gaccgcagta aaaacggaaa taacgaaagg
     8161 ccttgaagtg aacgatcgtg ttgaaataat tgcaccgtca ttcgctccgt cagacaaaat
     8221 tttgacgagt ggaaattatg gattggcaga tacagcgaaa gtgagggtga tgaaatgagt
     8281 gatgaataat gagtgatgaa tgatgaagct gtttgatgtt tcaggattca tgtttgatct
     8341 ttcattatga aaaaatttcg aaaggcgcga tttcccacta gaaggcaata cgcgaagcgt
     8401 ttggcgtttc gcgtttgccg cttttgcaaa taatgaattt cttcaccaca tacaaaaacc
     8461 cgcttaccgt cctgctcgtg ctgataatta tgagtggtgc ttttgtttat agtaagttgc
     8521 cggtatcctt atttcccgaa ataacatttc caaagatcaa agtgatcgca gatgccgggt
     8581 tacagcctgt tgacaagatg atggtgacag tcacgaagcc tttggaaaat gcgataaaac
     8641 gcgtaccaaa cctttcggat attcggagta tcaccagccg cggcagttgt gagatatctg
     8701 cctttctcaa ctgggacgcg aacgttgata tcagcaagca acagatcgaa gcgcaggttg
     8761 aagaaataag gaatgacctg ccgcagggcg taagcatcag cgttgagaaa atgaatcctt
     8821 ctatcttacc ggtgatcggc tacacacttg aaacacacaa caaccgcacg cccatcgata
     8881 tgaagcaaat cgctttgtac acggtgaagc cattcttatc gcaagtaccg ggcgtatccg
     8941 aagtacgcat cattggcggt aaacagaagg aatattggct caggctgaac atacaaaaaa
     9001 tgagcacgct ttccataacg ccggctatgc tcgcaaactc gcttaaccaa accaatttca
     9061 ttcaatcgag cggatacctg actgattatc gtttgatgta tttaactgtc accgacgcat
     9121 cggtccattc gttggatgaa ctgaaagagg tcatcatctc caacaacagc aaaaggatcg
     9181 ttcagttaaa agatattgca gatgtaacga tcaatgaagg aatagaatat acaaagatca
     9241 atgcgaatgg acaggaaggt ttactggtgg cggttgtaaa acaaccaaac acaaatctta
     9301 tagagttgtc agatgcggtg aagaaaaaag cggccgagct gcagaagatc cttccaccgg
     9361 gcatcacgat acgtccctat tatgtgcagg ccgattttgt gaatgattcc atcaagagtg
     9421 taagcgacag cctgtggatc gggctggtgc tcgctatcat tgtcgcaatt atttttctgc
     9481 ggtcgttcaa agcaagtgta acgatcttaa ttacgatccc tgttaccatc tgtctcacgc
     9541 ttatcagcat gtatgctgca ggttatacgc tgaacatcat gacgctcggc gccatcgcag
     9601 cagctatcgg cctcataatt gacgatgcga tcgtagtagt tgaacaaatt catcgcacgc
     9661 acgaagaaca tcctgatgaa ccaacgacaa cgcttgtaca aaaagcgatt aaatatttat
     9721 ggccggcgat ggtaggttca tcgtgcagca cgatcgtaat atttattccg tttgaattga
     9781 tgaccggagt tgcaggcgct tattttaaag tgatgaccaa tacaatgatc attacgttgg
     9841 tgtgttcgtt ctttgttaca tggttattcc tccccgttat ctatctcatc cttacaaaac
     9901 aaaagaaacc aactaaaaag caagcagaaa aagttgttga agtaaagaag cagagatggg
     9961 tctcattttt tattttcagg ccctacatca gtatcataat tattatcgcc tttgcagcgg
    10021 gtattttttt gatattgcct caactagaaa ccggctttct gccagagatg gacgaaggaa
    10081 gcatcgt
//
LOCUS       DASQJI010000601         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1612265,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000601 DASQJI010000000
VERSION     DASQJI010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612265"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VEV83_16360"
     CDS             <1..429
                     /locus_tag="VEV83_16360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK46753.1"
                     /translation="NALQRQNETNESKKNYNEIIAKTDQNSLKSESQYNKALAYLKEK
                     DLMNAIASFKESLKENPSDDDARENLQKALNDLKKQKQQNQPQSKKQQQQQNPQKEKK
                     QPPVNKEMMEQKFNELRNQEKQLQKKLQNRSGNGQPEKDW"
     gene            518..2026
                     /gene="lnt"
                     /locus_tag="VEV83_16365"
     CDS             518..2026
                     /gene="lnt"
                     /locus_tag="VEV83_16365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HYK46754.1"
                     /translation="MLRKIFASNLPAVISGLLVFIAIGEINFVLGWICFVPLFVSILN
                     KAPKQVFRIGCIFGVTLSCFAYSWIVSGAERFTGYNFLYGLLVFLACTIVIALYWGLV
                     LWCFSLLKQRSGKYSTLLNSVLIAAWFCVSEFLWSFVSEGMPWFHFYAGNSLEGNLYA
                     VQPASIIGTYVLTFVTVLVNFLLACFIAEKKWKKLFIPAAVIAVYMLCGYAIFQSFTN
                     NQSDSKTVKVAVLAENIPPDIKWNDENGNMLVQRLLDLNKAAVAENPDIILWSESAVP
                     WTYRKDDDLVREILKESAASHLTHILGINTEVASNVVNNSAYCILPNGDVMSRYDKQF
                     LLSFIEKPLAGVSIPFFSNKGFLVSDDVEHSLPLQTPFGKAGIMICNEAAIEKPARES
                     TRSGAEFFCNMSNDGWFNDTYIIRSHFLNARLRAVETRKDVVVNCNNGFSGMIDAAGN
                     IVQQQKDTEPFIKMANIHPNQYKPLATMYPDLFLYLCVACILVNGTMKFFRR"
BASE COUNT          613 a          404 c          457 g          567 t
ORIGIN      
        1 aatgcgctgc aaaggcaaaa tgaaacaaac gaatcgaaaa aaaattataa tgaaataatt
       61 gcgaaaaccg atcagaattc tttgaagtct gaatcgcaat acaacaaagc actcgcgtat
      121 ttaaaagaga aagatcttat gaacgcgatc gcttcattca aggaatcgct taaagaaaat
      181 ccgtcagacg acgacgccag ggagaattta cagaaggcgc tgaacgatct gaaaaaacaa
      241 aagcagcaaa atcagcctca gagcaagaag cagcaacagc aacaaaatcc tcaaaaggaa
      301 aaaaagcaac cgcccgtcaa caaagaaatg atggagcaaa aattcaatga gctgcgtaac
      361 caggaaaaac aattacaaaa aaaattacag aacaggtcag gtaacgggca gccggaaaag
      421 gactggtgat gtggctgtgc aaacaccaac gctattatta tcgccatgat tgtaatgttt
      481 gaccaacagt tatcgaaata ttatttttgt tcggcagatg ctgaggaaaa tttttgcttc
      541 aaaccttccg gctgttattt cgggtttgct ggtattcatt gccatcggtg agatcaattt
      601 cgttttagga tggatatgct ttgtgcccct gtttgtttcc attttgaata aggcgccaaa
      661 acaggtcttt cgtatcggct gcatttttgg tgtcacttta tcatgctttg cttactcatg
      721 gatcgttagc ggtgcggaac ggttcaccgg ctataacttt ctttatggtc tcctggtctt
      781 tcttgcttgt acaatcgtta tcgcgcttta ctggggactg gtcctttggt gcttttcatt
      841 gctgaaacag cgctccggaa aatattcgac tttgttgaac agcgtgctga tcgcagcatg
      901 gttttgcgtt tcagaatttt tatggtcttt cgtttcagaa ggaatgccgt ggtttcattt
      961 ttatgcgggc aactcgcttg aaggaaattt atacgccgtt cagccggcct cgataattgg
     1021 aacgtacgta ttaacctttg taactgttct tgtcaatttc ctgctcgcat gtttcattgc
     1081 cgaaaaaaaa tggaaaaagc tttttattcc tgccgcagtg atcgcggtct atatgttgtg
     1141 tggctacgcc atttttcaaa gtttcacgaa taaccaatct gacagcaaaa ccgtaaaggt
     1201 tgcagtgctg gcagaaaata ttccgcccga tataaaatgg aatgatgaaa atggcaatat
     1261 gctggtacaa cgtttacttg atctgaacaa agccgcggtt gcagaaaacc ccgatatcat
     1321 tttatggtct gaatctgcag tgccatggac gtaccggaag gatgatgacc tcgtcaggga
     1381 aatattgaaa gaatctgctg cttcacacct tacacatatt ttagggatca acacagaagt
     1441 tgcaagcaat gtggtgaata actcggctta ttgcatcctg ccgaatggtg atgtgatgag
     1501 caggtacgac aaacaattcc tcttatcatt tattgaaaag cctttagccg gcgtcagcat
     1561 tccttttttt tcaaataaag ggtttctggt gagtgatgac gttgagcaca gtcttccgct
     1621 gcaaacgcct tttggcaaag cgggcatcat gatctgtaat gaagcggcta ttgaaaagcc
     1681 tgcaagagaa tcgacgagga gcggcgccga attcttttgc aatatgagta atgatgggtg
     1741 gtttaatgat acttatatca tcaggtcgca ttttctaaat gccaggttgc gcgcagtaga
     1801 aacaagaaaa gatgtggtgg ttaattgcaa caatggtttt tccggaatga tagatgcagc
     1861 aggaaacatt gtccagcaac aaaaggacac cgaaccgttt ataaaaatgg caaacatcca
     1921 tccgaatcaa tacaagccac tagccacaat gtaccctgat ttgtttctct atctatgtgt
     1981 ggcgtgcatc ttagtcaatg ggacgatgaa gttttttcgg aggtgaagcc tgctccaata
     2041 a
//
LOCUS       DASQJI010000602         9583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1460691,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000602 DASQJI010000000
VERSION     DASQJI010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9583
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460691"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2189
                     /locus_tag="VEV83_16370"
     CDS             <1..2189
                     /locus_tag="VEV83_16370"
                     /inference="COORDINATES: protein motif:HMM:NF019284.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46755.1"
                     /translation="WTERGEDDDFYGPWEFFYDNGQLKSKGNFNNNGEREGEWVYYYA
                     NGIKKQHSTYVKDEPEGESTIWFDNGNLSEEDIYKAGKLDGEIKTYFFNGSIKTVEHY
                     NEDLKNGEMRAYTFDGFLSYVINYKDDEPEGEAKYFYKNGNTEAIKNFAGGKLNGSYK
                     HYSEAGVLDIEGSHANDAPAGSWKEYYDSKAIKAEYTYADGELDGVYKTYFENGKVSE
                     TIEYSKGKTDGKEQQFDEDGIKYNDGVYERGRLRELTFYDKSGNIISSSTTRKGAADL
                     TFFDPQGNKASQGHYDKDALADGKSTYYFKCGKIQSELSYRSGLREGERTIYYLNGKP
                     TEKINFTNDQENGLLTGYYPNGVVRYLGNYTDGKQQGEHQQFNSFGTLISSTYYLDDE
                     LNGYATYYEANGKKASEELYRTGWLLKATQFDSTGNVLAESDFQKGNGVLVYRHRNGN
                     VYTKSNYRNYLLEDKYEQFYFDGSPSYTVFYKHGAQDSTVKKYFFGGKLQYEGQYGLG
                     KREGVWTYYYSNGKINHTQKYLAGNMNGAGIAYNDDGTKYNETNYDDGELEGPTTIYG
                     DSNRIAVQLNYHKGVLINFTYEGKDGKMITPIPVKNGTGLVTAYYKNGKKSVEINFEE
                     SKVNGIRKLYFSDGKLFIDAPAEYGNDEGLHTGFFPNGKIAWKYNYVLDELHGLAISY
                     YPNGNVRSEENWYNGEQNGISKYYDDKGKLTETRVYYYDVILNVTK"
     gene            2203..4146
                     /locus_tag="VEV83_16375"
     CDS             2203..4146
                     /locus_tag="VEV83_16375"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK46756.1"
                     /translation="MKRRLNRMLKAVVAGSIVFCGNLHAQSFDEIIAKYPNNHAVMQN
                     YTKTITINLKNDAPVAESRTEEEILVLSDKANGIYNRQYVYSSSYNEMSDLEAYTKVP
                     DGKKYTKVKVTDIKTETSRSNSVFYDDAKESSFDLPSLVKGAIGYVGYTQTHKDVHLL
                     PPLYCVSYMPIINEKFVLNFPAGMELRYSIRNDENKLISVTEDNKGNQHSYTFTAHDI
                     KPADRFADAPSYAYYEPHIIVQLVSYKNEKGDVVKYLGNLDDLYKWNYNFISQLENTK
                     EQSLKHLSDSLTANAVTPKEKAQKIYEWVQANMKYVAFEEGIEGFIPRRAIDVYNRRF
                     GDCKDMASILTALLQLAGLKAYFTWIGTRDIPYDYTDVALPITDNHMIAALYLDSAWI
                     FLDGTDPNCIFGLPSSAIQGKQALIGISKDEYKLVRVPEVSVEKNMLVDSTYITLTDN
                     GIKGHSSVYYNGYWGSDVYDRLMYTDPKETRDYVKYRMGKASNKFIMGDYSISKLSND
                     DKLVNIQAGFEVPDYSKKVSDELYINLNLEKLFFDGMIDTAKRKIPIENEYKYTIKQY
                     TILEIPEHYSVSYLPKDYTLNTDIFAFTIKYSQQGNRVIASQELRKNYLLLQPQDFSS
                     WNSSLRQLNSQYKEQVVLEKKKP"
     gene            4160..6127
                     /locus_tag="VEV83_16380"
     CDS             4160..6127
                     /locus_tag="VEV83_16380"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK46757.1"
                     /translation="MITKKIIAIPYVLASLVASAQTFDYASNTEWADKPSLHAVHKPY
                     DSSSAVGILDERRIEYRSENDNVFIYEYEHFIVKVMNDDGIEMFNKIYIPLYKNAELQ
                     SVQARTISKDGKLILLDAANIKEMEEDGQKYKLFALEGLEPGSEVEYAYTVKRDLSLF
                     GSETFQRNNMPYLHAKFTLISPAYLRFEAKGYNGFHVSADSAIGERRIIAGYSDDIDQ
                     MDDEKYAETDPYLQRVDYKLSYNLSQNAAIRMYTWKEYAKKTYAYYTTRSPKEQKALD
                     DFASKIKFEQNITDAKKVLETEDYVKNNINVNDDLIGTEADNIEFIVKKKAANNDGIV
                     KLFAGLFDKFGIDYQIVFAGTRTGYTIDEDLENWNRANKVLFYFPATGKFISPSNIEL
                     RYPYIPFAYTNTKGLFLKGTVIGDFKTAIGTFANIPIEPFDQHALNMEVDVRFNADVD
                     TAIVRSQQILKGYPATSYRPIYHFLPEDKQDEANKQIIKDIAGDEDISNIKVENSALT
                     DFFDNKPLIISADIKSTQLIERAGNKILFKVGALIGPQEQMYQEKPRRLPVELPFPHV
                     LNRKLVLHIPDGYVVKNLDDLKMNIEYKENGITTMGFVSSYTRNDNVITISINETYSQ
                     INYPLSAFEDFKKVINASADFNKVVLILDKK"
     gene            complement(6147..8588)
                     /locus_tag="VEV83_16385"
     CDS             complement(6147..8588)
                     /locus_tag="VEV83_16385"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HYK46758.1"
                     /translation="MFFASIKNKLLRILARVVTIVLSLILLLLIIASIYVRTNKQKLV
                     DIVNSNINKNISGKFELQEIDLSTFSHFPNIAVDLHDVQLTDTVYHKPLLRCQLLSFR
                     FSIFKLWNIQHQLAKLVIEHGSVTLFTDSSGYQNTSMFTTNRKSSEPRGSFIVHRIEM
                     KDVRFRMDDAPKAKHYDFEFQELTANVNTEDSVTEFEVDQKTIIHALTFNAARGSYLE
                     NQTLEGSLDLRFNTATKILLCDKNEIAINGQEYIISARFLFSGEPKFHIDATTKSLPY
                     EKGRALVTPKLKNTLGNIHVKSPLDVHASIDGLLKFRSIPLVNLSWETDKNELSAGPV
                     TFKDCSFKGTFVNQIADTLPRTDEFSRVVLKTFAGNWNGLQLDGKNIIVTNLLKPYAQ
                     FDLKSSASLSQLENLFASDQIQFLDGTADVALLYSGLLAADPASLKNLTAQLRIKDGK
                     MQYVPKNILIEKCSGEVTIGENKLLFKDFEFDVLHTHIKINVSGSNISGLSENEAGKA
                     AVEFNLYSPYLHFDEILKLLASEEKNNTQKSKRPAIPVARSINALFTNLNFRVNLAAD
                     TLSKGAFYGRKLSARLLFQKDHWTFENISMQHAGGFVGIAGSLIKNSSSQATATTNIR
                     LQQVNIQQVFKEFNNFGQDGITSQNLRGSLTATVQLSMQLYKRNGSFIVGSRNGYVDF
                     SLKNGAIVNHKSLEQIKVLFLKDRDMSNVRFAELKDRIDVYPSYVYINRMEIQSTAVT
                     MYVEGEYDFLKKNTDILIQVPISNMKKRDQDYTAKNKGVNAKTGASVLIRGKNGADGD
                     VKFAPTLSKKIKANN"
     gene            8752..>9583
                     /locus_tag="VEV83_16390"
     CDS             8752..>9583
                     /locus_tag="VEV83_16390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK46759.1"
                     /translation="MRTQSIAARIVLMVHVFFFSFQALRAQEIGLELYSLRNQFKTDV
                     PGTLAKVKSWNIREVEGGDTYGLTAEAFKKRLDENNLKMVSVGADFKQLAEHIDSVID
                     KAKLFGAKYVVCTWIPHTGDDFTIDDIKKSVDVFNTAGKVLQQNGLSFCYHPHGFEFR
                     PYEGGTLFDYLVQHTDRKYVNFEMDVFWVKHPGQDPTALLEKYPDRFLLLHLKDRKPG
                     TEGNQTGHADVETNVVLGQGDVNIAAVMKAAKKIGVKYCFIEDESSRSEEQIPLSLQY
                     L"
BASE COUNT         2992 a         1942 c         2141 g         2508 t
ORIGIN      
        1 aatggacaga gagaggtgag gacgatgatt tttacggccc gtgggagttc ttttatgaca
       61 acgggcaact aaaatcgaaa ggcaacttca acaataatgg cgaaagagaa ggtgaatggg
      121 tttattacta cgcgaatgga atcaagaaac agcactccac ctatgtgaaa gatgagccgg
      181 aaggagaaag tactatttgg tttgacaatg ggaacctgtc ggaagaagat atttacaagg
      241 cgggaaaact ggatggagaa attaaaacat atttcttcaa cggatcaata aaaaccgttg
      301 aacattataa tgaggatctc aaaaatggtg aaatgagagc ttacaccttc gatggatttt
      361 tgagctacgt catcaactac aaggatgatg agccagaggg cgaagcaaaa tacttctata
      421 aaaatggcaa cacagaagca ataaaaaatt tcgctggcgg aaaattgaat gggtcttata
      481 agcactattc ggaagccggc gtgctcgata tcgagggaag ccacgcgaat gatgcgccgg
      541 caggcagttg gaaggaatat tatgattcaa aagccatcaa ggccgaatat acttatgccg
      601 acggcgagtt ggatggtgtt tacaaaacgt attttgaaaa tggaaaagtc tctgagacga
      661 tagaatactc aaaaggaaaa acggatggta aggaacagca gttcgacgaa gacgggataa
      721 aatataatga cggtgtttat gagcggggca ggctcagaga attgacgttc tacgacaaat
      781 ccggaaacat aatcagttct tcaactacgc gtaaaggtgc agccgactta acgttttttg
      841 atccccaggg aaacaaagca agccaggggc actatgacaa ggatgcactc gccgacggca
      901 agtcaactta ctattttaaa tgtgggaaga tccaatccga gctcagctac agatccggcc
      961 tgcgggaagg cgaaagaacg atctattacc tcaacggcaa gccgacagaa aagataaatt
     1021 ttacgaatga ccaggaaaat ggactgctta cgggatacta tcccaatggc gtggtgcgat
     1081 atctcggcaa ctacacagac gggaaacaac aaggcgaaca ccaacagttc aattcatttg
     1141 gcacgctcat atcatccaca tactacctgg atgacgaact caatggctac gccacctact
     1201 atgaagccaa cgggaagaaa gcttcggaag aactgtaccg caccggctgg cttttaaaag
     1261 ccacacagtt tgactcgacg ggcaatgtgc tggcagagag tgattttcaa aaaggcaacg
     1321 gcgtactcgt ttaccgtcac cgaaacggta atgtatatac aaagtcgaat taccgcaact
     1381 atcttctcga agataaatat gaacagttct attttgatgg ttcaccatcg tacaccgttt
     1441 tctataagca tggtgcacaa gacagcacag taaaaaaata ttttttcggc ggcaagctgc
     1501 agtatgaagg gcaatatgga ttaggtaaaa gagaaggcgt ttggacgtac tactacagca
     1561 acggaaagat caatcatacg cagaagtatt tagccgggaa catgaacgga gccggaatag
     1621 cttataatga tgacggaaca aaatacaatg aaacaaacta cgatgacggt gaactggaag
     1681 ggccaacaac aatttacggc gatagcaacc ggatcgccgt gcagttaaat tatcataaag
     1741 gagtacttat aaattttact tatgaaggaa aagacggaaa gatgataacg cccatacccg
     1801 taaaaaatgg taccggtctt gtgactgcgt actataagaa tggaaagaaa agcgtcgaaa
     1861 taaattttga agaaagcaaa gtgaacggga tacgaaaatt gtacttcagc gatgggaaac
     1921 tgtttattga tgctcctgcc gaatatggca atgatgaggg actgcacaca ggattttttc
     1981 cgaatggtaa gattgcctgg aagtataatt atgttcttga cgagctccat ggccttgcca
     2041 tttcgtacta tccaaacgga aacgtgagat cggaagaaaa ctggtacaat ggtgagcaaa
     2101 atggaataag caagtattat gatgacaaag gcaagcttac tgaaacacgg gtttattatt
     2161 atgatgtgat cctaaacgtt actaaataat ccaactgtaa ttatgaagag aagattgaac
     2221 cggatgttga aagccgttgt tgcgggctcc attgtttttt gcggtaacct gcatgctcaa
     2281 tcgtttgatg agatcattgc aaaatatcca aacaatcatg cagtgatgca gaactacacg
     2341 aaaacgatta cgatcaattt gaaaaacgat gcacctgtcg ccgaaagcag gaccgaagag
     2401 gagatccttg tattatctga taaagcgaac gggatctaca accggcagta cgtgtatagc
     2461 agttcgtaca atgaaatgtc agaccttgaa gcttacacca aagtacctga cggaaaaaaa
     2521 tatacgaaag taaaagtgac cgatatcaaa acagaaactt ccaggagcaa cagtgttttt
     2581 tacgatgatg caaaagaatc ttcgttcgat cttccatcat tggttaaagg tgcaattgga
     2641 tatgttggat acacccaaac gcacaaagac gtgcacttgt tgccgccatt atattgtgtt
     2701 tcttacatgc cgatcataaa tgaaaagttc gtcttgaatt ttcctgccgg catggagttg
     2761 cgctatagta tccgcaacga cgaaaacaaa ctgatctcgg ttacggagga caataaaggg
     2821 aaccaacaca gctatacgtt tactgcccac gacatcaaac ctgcagaccg gtttgccgac
     2881 gcgccgtcat atgcatatta cgaaccgcat atcatcgtac agcttgtttc gtacaaaaat
     2941 gaaaagggag acgttgtaaa atatctcggc aacctcgacg acctgtacaa atggaattat
     3001 aatttcatca gccagcttga aaacacaaaa gaacaatcac taaaacattt gtcagacagc
     3061 ctgaccgcta atgcggtaac tccaaaggaa aaggcacaaa agatctacga gtgggtgcag
     3121 gctaacatga agtatgtggc atttgaagaa gggatcgaag ggtttattcc acgcagggcc
     3181 atcgatgtat ataaccggag attcggcgat tgtaaggata tggcaagcat cctcaccgca
     3241 ttgcttcaac ttgcggggtt gaaggcctat ttcacatgga taggaacaag agacatacca
     3301 tacgattata ctgacgtcgc attaccgatc acagacaatc acatgatagc tgcactttat
     3361 ctcgacagcg cgtggatttt cctggacggc acggacccga attgcatttt cggtttaccg
     3421 agttccgcga tccagggaaa acaggcattg atcggcattt caaaagatga atacaagctc
     3481 gtgagggttc ctgaggtcag cgtggagaaa aatatgctgg tcgacagcac gtacatcacg
     3541 cttactgaca acggtatcaa aggacattcc agcgtttatt ataatggtta ctggggtagc
     3601 gacgtttacg atcgacttat gtacaccgat ccgaaggaaa cacgcgatta cgtaaaatac
     3661 cgcatgggca aagcgagcaa taaatttatc atgggcgatt acagcatcag caaattaagc
     3721 aacgatgaca agctggtaaa tatccaggcc ggctttgaag tgccggatta cagtaagaaa
     3781 gtttcagatg aactctacat aaatctgaat cttgagaaac tttttttcga tggaatgatc
     3841 gatacagcga aacgaaagat ccccatcgag aatgaataca aatacacgat aaagcaatac
     3901 acgatcctcg agattcctga acattattcc gtgagttatt tgccgaaaga ttatacgctt
     3961 aacaccgata ttttcgcatt tacgatcaaa tattctcagc agggcaaccg ggttatcgca
     4021 tcgcaggaac ttcgtaaaaa ttacttgttg ctgcagccgc aggatttttc gagctggaac
     4081 agttcactca ggcaacttaa tagtcagtat aaagaacagg ttgttcttga aaaaaagaaa
     4141 ccataaaaca aatgtgcgaa tgataaccaa aaaaattatt gcgataccat acgttcttgc
     4201 gagcctcgtg gcctcagctc aaacatttga ctacgcttca aatacagaat gggcggataa
     4261 gccgtcatta cacgccgtac acaagccgta tgattcctca agtgctgtag gcattcttga
     4321 tgaaaggaga atagaatatc gatctgagaa cgacaacgtt tttatttatg agtacgagca
     4381 tttcattgta aaggtgatga atgacgacgg gatcgaaatg ttcaacaaga tctatatacc
     4441 cttatacaag aatgccgagc tgcagagcgt gcaggcgaga acaatatcga aggatggcaa
     4501 actgatcctc cttgatgcag ccaatattaa agagatggaa gaagatggcc agaaatataa
     4561 gttgtttgcg cttgagggcc tggaaccagg gtcggaagta gaatatgctt acacggttaa
     4621 gcgcgacctg agcctgtttg gcagtgaaac attccagcgc aataacatgc cctacctgca
     4681 tgcgaagttc acgttgatca gcccggctta tctcaggttc gaggcaaaag ggtataatgg
     4741 ctttcatgtt agtgcggatt cagctatcgg cgagcggcgc atcatcgcag gttacagcga
     4801 cgacatagac cagatggatg acgaaaaata cgctgagact gatccttatt tgcaacgggt
     4861 ggattataaa ttgagctata acctttcgca aaacgcggcg atccgcatgt acacgtggaa
     4921 agagtacgca aaaaaaacat acgcgtatta caccacgcgt tcaccaaaag aacaaaaggc
     4981 gcttgacgac ttcgcttcca aaataaagtt tgaacaaaac ataaccgatg caaaaaaggt
     5041 tttggaaaca gaagactatg taaagaacaa tatcaatgtg aacgacgacc tcattggcac
     5101 tgaagccgac aatattgaat tcattgtaaa gaaaaaagcc gcaaataacg atggcatcgt
     5161 aaaattgttc gcaggtttgt ttgataagtt tggtatcgat tatcaaattg ttttcgcagg
     5221 cacccgcacc ggttatacca tcgatgaaga cctggaaaac tggaaccgtg caaataaagt
     5281 gttgttctat tttccggcga ccggcaaatt catatccccc tcaaacatcg agcttcgtta
     5341 tccctatatt ccttttgcat ataccaacac aaaaggttta tttctgaaag gaacagtcat
     5401 cggcgatttc aaaacagcga tcggcacctt tgccaacata cctattgagc ctttcgacca
     5461 gcatgcgttg aatatggaag tcgatgttcg cttcaatgca gatgtagaca ctgccatcgt
     5521 acgatcacag caaatactta agggttaccc tgctacgagc tacaggccga tttaccattt
     5581 ccttccggaa gataaacaag acgaagcaaa taaacagatc ataaaagaca tagcgggcga
     5641 cgaggacatt tcgaatatca aagtggaaaa ttcagcactt actgattttt ttgataacaa
     5701 accactgatc ataagcgccg acataaaaag cacgcagctg atcgaacggg caggcaataa
     5761 aatattgttt aaagtgggcg cacttatcgg gccgcaagag cagatgtacc aggaaaagcc
     5821 gaggcgcctt ccggttgaat tgccattccc acatgtgttg aacaggaagc tggttctgca
     5881 tatcccggac ggctatgtcg tcaaaaattt ggatgatctt aaaatgaata tagaatacaa
     5941 agaaaatggg atcaccacaa tgggtttcgt gagcagttac acgcggaatg ataatgttat
     6001 tacaatatct attaatgaaa cttacagcca gatcaactat ccgctatctg cgtttgagga
     6061 ttttaaaaag gtcatcaatg catccgccga ttttaataag gtcgtgctga tccttgataa
     6121 gaagtgatcg gtggagttac ctgcctctaa ttatttgctt taattttttt tgatagggta
     6181 ggggcaaatt ttacgtctcc atcggcaccg ttcttcccac gaataagaac gcttgcgccc
     6241 gtttttgcgt ttacgccttt attcttcgcc gtgtaatctt gatcgcgctt tttcatattg
     6301 cttataggaa cttgtatcag aatgtcggta ttctttttca ggaaatcata ttcaccttcc
     6361 acatacatgg ttacggcggt tgactgtatt tccatgcgat ttatatagac gtagctcggg
     6421 taaacatcga tcctgtcttt caattcagca aaacgcacat tagacatatc cctgtccttg
     6481 agaaaaagca cctttatctg ttcgagactt ttgtggttta caatagcacc attctttaaa
     6541 gagaaatcaa catatccgtt tcttgagcca acaatgaaag agccgtttct tttataaagt
     6601 tgcatgctga gttgtacggt tgcggttaaa ctaccacgca ggttttgtga ggtgatgcca
     6661 tcctgtccga agttattaaa ctctttaaaa acctgttgaa tatttacttg ttgtaatcgg
     6721 atattagtgg tggctgtagc ctggctgctg ctgtttttga tgagacttcc tgcaatgcca
     6781 acaaatccac cggcatgttg catggaaata ttttcaaagg tccagtgatc tttctgaaac
     6841 agcagccttg cacttaattt tctgccatag aatgcgcctt tgcttaacgt atctgcggct
     6901 aaatttaccc tgaaattcag gtttgtaaaa agtgcgttta tgcttctcgc aacggggatc
     6961 gccggtcgtt tgcttttttg cgtattattt ttctcctcac ttgcgagcag ttttaaaatc
     7021 tcatcaaaat gtaaataggg agaatacagg ttgaactcaa cagccgcttt gccggcttcg
     7081 ttttctgaaa ggcctgagat gttactgccg ctcacattta ttttgatgtg cgtgtgcaga
     7141 acatcgaact cgaaatcttt aaacagtaat ttattttcgc cgatcgttac ttcacccgaa
     7201 catttttcta tgagaatatt ttttggtaca tactgcattt taccatcctt tatcctcagt
     7261 tgagcggtca ggttttttag tgaagcagga tcggccgcca agagtccgct atacagcaaa
     7321 gccacgtcgg cggtgccatc taagaactga atctggtcgg acgcaaaaag gttttccagc
     7381 tggcttaagg aagcgcttga tttgagatcg aattgcgcat aaggtttcaa aagattggta
     7441 acaataatat ttttaccgtc caattgaagt ccgttccagt tgcccgcaaa tgttttcaat
     7501 acaactcgtg aaaactcgtc ggttcttggt aatgtgtccg caatttgatt gacaaaagtt
     7561 cccttaaaag aacaatcttt aaacgtaaca ggtccggcac ttaattcatt cttgtctgtt
     7621 tcccaactta agttcactaa aggtattgaa cggaacttca gcaatccgtc tatcgaggca
     7681 tgaacatcaa ggggagattt cacgtgtata ttgccaagcg tattttttag tttaggtgtc
     7741 accagcgctc tgcctttttc atatggaagg cttttggttg tcgcatcaat atgaaatttt
     7801 ggctcacctg aaaacaggaa cctggctgaa atgatatatt cctgcccgtt gatcgcgatt
     7861 tcatttttat cacacaacaa gatttttgta gctgtattga atcgcagatc cagagaacct
     7921 tccagcgttt gattctcgag gtaacttcca cgggctgcgt tgaatgtaag cgcatgtatg
     7981 atcgttttct ggtcaacctc aaattcagta acagagtctt ccgtgtttac attcgctgtt
     8041 aattcctgga attcgaaatc gtaatgcttt gccttcgggg catcatccat tcgaaaccgg
     8101 acatccttca tctcaatgcg gtgtacgata aatgaacccc ggggttcaga ggattttcga
     8161 ttcgtcgtaa acatgcttgt attctggtac ccactgctgt ctgtaaacaa cgtcacactc
     8221 ccgtgctcga tcacaagttt agcgagctgg tgttgaatgt tccacaactt aaagatgctg
     8281 aaacggaagg aaagtaattg gcatcgtaat aacggtttgt gataaacagt gtcagttagc
     8341 tgtacgtcgt gcaggtcaac agcgatattg ggaaagtgcg aaaacgtact caggtcgatc
     8401 tcttgtaatt caaacttgcc ggaaatgttt ttgtttatgt tactgtttac aatgtcgacc
     8461 aatttttgct tgttggtgcg aacgtagatg cttgcaatga tcaacagaag caggatcaac
     8521 gataacacga ttgtcaccac acgtgcaaga atgcgtaata acttattttt tatcgatgca
     8581 aaaaacatgg gcccgggatg atttattatt caaatttacg atgtcgtgta cccgttgtaa
     8641 caaaaattat tttttcacca tttgcccctc agaaaatgaa tttgctgttt aaaagaaact
     8701 tttgaaatgg gaagtcagta ccttgctctc ctaaactgaa atattttacc catgagaaca
     8761 caatccattg ccgcacgaat tgttttaatg gtacatgtgt ttttcttttc gtttcaagcg
     8821 ctgcgcgcgc aggagatcgg gcttgagttg tatagtctcc gcaaccagtt caaaacagat
     8881 gttccgggaa cacttgcgaa agtaaaaagc tggaacataa gagaagtaga aggtggcgat
     8941 acatatggtc tcaccgctga ggcatttaaa aaacgtctcg atgaaaacaa tttgaaaatg
     9001 gtaagtgttg gagcagactt taaacaactg gcggaacata tcgattcagt gatagacaag
     9061 gcgaagctct ttggcgccaa atacgttgta tgcacatgga tacctcacac cggcgatgac
     9121 tttacgatcg atgatataaa aaaatcagtc gatgtcttta acactgccgg aaaagttttg
     9181 cagcagaatg gtttgagctt ttgttaccac ccacatggat ttgagttcag gccgtatgag
     9241 ggtggtacct tattcgacta tcttgtacaa cacacggatc ggaagtacgt taattttgaa
     9301 atggatgttt tttgggtcaa gcacccgggg caggatccga ccgcgttgct tgaaaaatat
     9361 ccagaccgct tcttgctttt gcacctcaaa gacaggaagc caggtactga aggaaatcaa
     9421 acagggcatg ccgatgtaga gacgaacgtt gttttgggcc agggtgacgt aaacatcgcg
     9481 gctgttatga aagcggcaaa aaagatcggt gtgaaatatt gcttcatcga agatgaatct
     9541 tcaaggtcgg aggaacagat cccactcagt ctacaatatt tag
//
LOCUS       DASQJI010000603         6546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1767041,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000603 DASQJI010000000
VERSION     DASQJI010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6546
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767041"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VEV83_16395"
     CDS             complement(<1..782)
                     /locus_tag="VEV83_16395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46760.1"
                     /translation="MKTLQFLLLSACCALFFVSCQKESGSSTATPPEQSINGASTNTD
                     VLINITNKIDPNNFVKKIDNPYQPWVPGTTFIYKNVIIEDGNQKIEIDTVHVTHDTKL
                     ILGVECRVVHDFVSRAGKRTEDTYDWYAQDKDGNVWYFGEDSKELQHGQWVSEGSWEA
                     GVDGAEPGIVMWAHPEDHIGEAYRQEYLKDVAEDKATVLSANSTVAILMGTFKHCVVT
                     QEKTRLEPDVRETKSYAPGIGNISTVMNEGGSEHEELVKIIN"
     gene            complement(925..2178)
                     /locus_tag="VEV83_16400"
     CDS             complement(925..2178)
                     /locus_tag="VEV83_16400"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK46761.1"
                     /translation="MKLLTRINRNFLLMSAVLLVVCSVIFYFLVQQIIYANANNDLYT
                     EKKQITQAFHETGTLPVSQWLGGDMVDVQKTETRGEERLIDTVIYSAIDKENVPYRQL
                     SFPLSRGNDRYMITVGTSRLDAQDFAMTILGFVIMFIAALFLVQYFINRRTSKRIWLP
                     FKQTVTKMKTFDLTGATKISFSHSSTEEFEELNQSLNKMTEKIYNDYDRLKQFTENAS
                     HEIQTPLSIILNKIEMLIQSENFSEEQMAHLQKINEAAIRLSRLNTALLTLTKIENRQ
                     YADEGQLELTSFMQRKIYELQDFICQKNLKVSIDGDNDVLMYMNPSLADLLFENLIRN
                     AIKHNINGGFINIMIEQNKFIISNSGRPLQLPAGELFERFVKNDQSSDSLGLGLAMVK
                     QICNNYGFAIDFTSKDDLHNVSIRF"
     gene            complement(2175..2852)
                     /locus_tag="VEV83_16405"
     CDS             complement(2175..2852)
                     /locus_tag="VEV83_16405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46762.1"
                     /translation="MKILLVEDELALGESVASFLVKEGYVCEWVKGFRAADEKVGIYD
                     YDCALIDITLPDGSGLNVVRDLKRTNPETGIIIISAKNSLDDKVSGLDLGADDYLTKP
                     FHLAELNSRIKSLLRRRKFDGNKEIIAGDIKIIPDKFSVFVNDKSISLTKKEYDLLLF
                     FISNKNRVLTKEAIAGHLWGDHIDSAESFDFVYTHLKNLRRKIIDKGGEDHIRTIYGI
                     GYKFQLA"
     gene            complement(2897..5455)
                     /locus_tag="VEV83_16410"
     CDS             complement(2897..5455)
                     /locus_tag="VEV83_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HYK46763.1"
                     /translation="MGVFNTISRQAIAATILLCAVFTSSSAQAPAAYSSADIYLQLKK
                     LNVLGSVLYIAAHPDDENTRLLAYFSKEKLYRTGYLSLTRGDGGQNLIGDEQGIDLGL
                     IRTQELLSARRIDGAEQFFSRAYDFGFCKTADEALKTWDHDKILSDVVWVIRKFQPDV
                     IITRFPGDERAGHGHHAASAILAKEAFTAAADPTKFPEQLKNGVQTWQAKRILWNTFN
                     FGNNNTTTPDQFKLDVGVYNSLLGKSYGEIASESRSQHKSQGFGVQRQRGQIFDFFSL
                     TAGDSIKDDLFNGVSTSWKRVDAAANIQSQIDAIINAYEFAHPENSVSALVKLFQSLQ
                     SLPDSYWKNKKLDEVRQLVLNCCGLFAEATTSTEFAIAGQKFNVQFLVDNRLDHPVQL
                     KNVKLLSFDSTLPNNLPNDQNVIFQKAFNIDATAPVTEPYWLQYPLEKGGSFTVNDQQ
                     LIGKAQNDPAFMASFTFTIDGTDINVQRPVQYKFTDPVKGEMYEPFIVVHPLSVSIEP
                     PVILTNVKQQAAVKNDEVHVQVKSNITAPQTPLNLSFVQGTNSTVIKDTVVDLDSGKM
                     YDFYFFIDRYYQPHSSAAVDNSPDPGVAVQIKLDGYRDPFTENLHSIQYDHIPYVHYY
                     AADKIHVVNDEVKIVGKHIGYIAGAGDKVMQSLQQMGYVVTVLNEKDVTAANLKQFDA
                     VITGVRAYNVHDWLPEKYDILMNYVQNGGNLIVQYNTNNQISSIRTNIGPYSFSISRT
                     RVTDENADVHILLPDHPALNFPNKITADDFKGWVQERSTYHAEQLDSHYEAPLGMHDP
                     NDTESNGALVIAKYGKGNFVYTGLVFFRQLPSGVPGAYRLMANLIALPKNKAVM"
     gene            complement(5571..5903)
                     /locus_tag="VEV83_16415"
     CDS             complement(5571..5903)
                     /locus_tag="VEV83_16415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone"
                     /protein_id="HYK46764.1"
                     /translation="MFLCLLIFCSANVFAATTTDTLKVWGNCDECKGKIEKAALKAGA
                     VSADWNADNYQLVISYNNEQTSAVNIEKEIAAVGYDTQDVKATDDAYHKLPKCCQYER
                     EGNKQEQQ"
     gene            complement(6001..6426)
                     /locus_tag="VEV83_16420"
     CDS             complement(6001..6426)
                     /locus_tag="VEV83_16420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46765.1"
                     /translation="MHTKNFLLSAFVTAVILFILNAVVFLIFLGNFFQTHPAVSPEFM
                     KQLYRPNDELIWWAVVLSAIAIGFLVTTVTKWSGARTFISGLRTGIIFGFLLLCAVDF
                     GLLGSTNNFTTAGALADLLCSTTTITISSGVAAFMLGRK"
BASE COUNT         1735 a         1509 c         1372 g         1930 t
ORIGIN      
        1 ttgttgataa tttttaccag ctcttcatgc tcactcccac cttcattcat gaccgttgaa
       61 atatttccaa ttccgggcgc ataagacttg gtttctctca catccggttc cagccttgtt
      121 ttttcctggg ttacaacaca atgcttaaaa gttcccatta gtatggcaac ggtgctattt
      181 gcgctgagta cagttgcttt atcctccgca acgtccttca aatattcctg cctgtacgct
      241 tcgcctatat gatcctccgg atgcgcccac atcacaattc ctggttcagc accgtccaca
      301 ccggcctccc atgaaccttc tgacacccat tgcccatgtt gaagttcttt tgaatcctct
      361 ccgaaatacc aaacatttcc gtccttatcc tgcgcatacc agtcgtacgt atcttcagtt
      421 cgtttacctg cccgggaaac aaaatcatgc acaacgcggc attcaactcc taagatcagt
      481 tttgtatcat gcgtgacatg cacggtatcg atttctatct tctggttacc gtcttctatg
      541 atcacgtttt tgtaaataaa tgtagtaccg ggtacccacg gctggtaagg gttatcaatt
      601 ttcttcacaa agttgttcgg gtcaatcttg tttgtaatat tgatcaggac gtccgtattc
      661 gtagaggcgc cgttgatcga ctgttctggc ggcgtcgcgg tggagctgcc cgattctttt
      721 tgacaagaca caaaaaataa ggcgcagcat gcagacaaga ggagaaactg aagtgttttc
      781 atcgtgattg attttaggcg tgaagtaaaa ctgcttttac aggcgaattc aattgcaaag
      841 ctgaaaggcg attctgtagg aattctgtca gtaaaatgat caacgcgaca aaaattattc
      901 cgttcccggc tggtgaaaaa aagtttagaa acgaattgaa acgttatgca aatcgtcctt
      961 ggaagtaaaa tcgattgcaa agccgtaatt gttgcaaatt tgtttcacca tcgccagtcc
     1021 taaacccagc gaatcagacg actggtcatt ctttacaaat cgttcgaaca attcgccggc
     1081 cggtaattgc aatggccgcc cggaatttga gataataaat ttattttgct cgatcatgat
     1141 gttgatgaat cctccattga tgttatgttt aatggcattg cggataagat tttcaaaaag
     1201 caggtcagca agcgagggat tcatgtacat caacacgtca ttgtcgccgt ctatagaaac
     1261 cttcaaattt ttctggcaga taaagtcctg caactcgtaa atctttcttt gcataaaaga
     1321 agtaagttcg agctgtccct catccgcata ttgccggttt tcgatctttg tgagcgtcag
     1381 caaagcagta ttcagcctgg aaaggcgtat ggcagcttcg tttatctttt gcaggtgcgc
     1441 catctgctct tcggaaaaat tttctgactg gatcagcatc tcgatcttat tcaggatgat
     1501 cgacagtggc gtttgaattt catgcgacgc attttcagtg aattgcttca gtcggtcata
     1561 atcattatag atcttttcag tcattttatt taaagactga ttcagttctt cgaattcctc
     1621 cgttgacgaa tgtgaaaatg agatctttgt tgcaccagtc aggtcaaagg ttttcatttt
     1681 tgtgaccgtt tgcttaaatg gcaaccaaat tctttttgaa gttctccggt taatgaaata
     1741 ttgaacaaga aaaagagccg caataaacat tataacaaat ccaaggatcg tcatcgcaaa
     1801 atcctgcgcg tccagtcttg atgttccaac tgtgatcatg tatcggtcat ttcctcttga
     1861 aagggggaat gaaagctggc ggtaaggaac attttcttta tcgatggcgc tgtaaattac
     1921 tgtatcgatc agccgttcct cgccgcgtgt ttctgtcttt tgcacgtcga ccatatcacc
     1981 gccaagccat tgcgaaaccg ggagcgtgcc cgtttcatgg aacgcctgcg tgatctgttt
     2041 tttttcggtg tacagatcgt tatttgcatt tgcgtaaatt atttgctgca ccaggaaata
     2101 aaatatcacg ctgcatacca ccaacagcac agcagacatg agcagaaaat ttcggttgat
     2161 gcgcgttagc aatttcatgc aagctgaaat ttatatccta tcccatatat agtccgaata
     2221 tggtcttctc ctcctttgtc gataattttc ctgcgaagat ttttcagatg tgtatacaca
     2281 aaatcaaacg actcggcaga atcgatatga tcgccccaca aatgccctgc aatggcttct
     2341 ttggtgagca cacggttttt gttgctgatg aaaaacaaca gaaggtcata ttcttttttt
     2401 gtgagggaaa ttgatttgtc attcacaaac acggaaaatt tatcggggat gatctttata
     2461 tctcctgcga tgatctcttt gtttccgtca aactttcttc ttcgtaaaag cgacttgatg
     2521 cgtgaattaa gctcggcaag atgaaatggt ttggtgagat aatcatcggc gccgagatca
     2581 aggccggaaa ctttgtcgtc gagggaattc tttgcagaaa taatgatgat ccccgtttcc
     2641 ggatttgtgc gtttgagatc tcgcacaacg tttaacccgc ttccatctgg taacgtgata
     2701 tcgatgagag cacaatcata atcgtagatt cctacttttt cgtcagccgc gcgaaaaccc
     2761 ttcacccatt cacaaacata cccttccttc acgaggaacg aagcgaccga ttcgcccagg
     2821 gcaagctcgt cttcgacaag cagtattttc attttgcaaa attgctgaaa gattctgtgg
     2881 aaatgctgtc cgtgttttac atcacagcct tgttctttgg cagtgcaatt aaattagcca
     2941 tcagcctgta cgcgccggga accccagatg gcagttggcg gaaaaaaacg aggcctgtat
     3001 aaacaaaatt tccttttccg tatttcgcta tgaccaatgc accattactc tctgtgtcat
     3061 tcggatcgtg cataccgagc ggtgcttcat aatggctgtc gagttgttcg gcatgatacg
     3121 tgcttcgttc ctgcacccat cccttaaaat cgtcagcagt tattttgttg gggaaattca
     3181 gggccgggtg atccggcagc agtatatgta cgtctgcgtt ctcgtccgta actcttgtgc
     3241 gactgatcga aaaactataa ggcccgatat tcgttctgat cgagctaatc tggttattgg
     3301 tgttatattg aacaataaga ttgcccccgt tctgaacata attcatcagg atatcgtact
     3361 tctcgggaag ccagtcgtgc acattataag ccctcacacc tgtgatcacg gcatcaaatt
     3421 gctttaggtt tgcagcggtc acgtctttct cgttaagtac agtaaccaca taacccattt
     3481 gctgcaaact ctgcatcact ttgtcgcccg cgccggcgat ataaccaata tgttttccaa
     3541 caatttttac ttcgtcgtta acaacatgaa ttttgtccgc tgcgtaataa tgtacataag
     3601 gaatatggtc atattgaatc gagtggagat tctcggtaaa tggatccctg tatccatcaa
     3661 gctttatctg caccgccaca cccggatccg gactattgtc caccgccgca gaagaatgcg
     3721 gttgataata acgatcaatg aagaaataaa aatcatacat tttccctgaa tcgagatcca
     3781 ccactgtgtc ttttataacc gttgagttcg ttccctgcac aaacgacaaa ttcaacggcg
     3841 tttgaggtgc cgtgatattt gatttgacct gcacatgaac ttcgtcattc ttcacagcag
     3901 cctgttgctt cacgtttgtt agaattaccg gcggttcgat tgaaacgctt aatggatgaa
     3961 ccacaataaa aggctcatac atttcgcctt ttaccgggtc ggtgaatttg tactgaacag
     4021 ggcgctgaac attgatatcg gttccatcta tcgtaaaagt aaacgaagcc atgaaggccg
     4081 gatcattctg tgctttaccg ataagttgct gatcattcac cgtaaaactt cctccttttt
     4141 ctaatggata ttgaagccag tacggctcgg taacgggcgc cgttgcatca atattaaacg
     4201 ctttctgaaa aattacattc tgatcgttcg gtaaattgtt tggcaatgtt gaatcaaatg
     4261 aaagcagctt gacattcttc aattgcaccg gatgatccaa acggttatcg acgagaaatt
     4321 gaacattgaa cttctggcct gcaattgcaa attcagtact cgtcgttgcc tccgcaaaca
     4381 atccgcaaca attcaatacc agttgcctta cctcgtcaag ttttttattt ttccaataac
     4441 tatcaggcag gctttgtaag gattgaaaca gttttaccag tgcactcaca gagttttcgg
     4501 gatgagcgaa ctcgtaggca tttatgatcg catcgatttg cgactgaata ttcgctgctg
     4561 catctacgcg cttccacgaa gtgctaactc cattgaacag atcatctttt atcgagtcgc
     4621 cggcggtcaa cgaaaagaaa tcgaatatct gcccgcgttg ccgctgaaca ccaaaaccct
     4681 ggcttttgtg ctggctgcgg ctttcactgg ctatttcacc ataacttttt ccgagcaaag
     4741 aattataaac accaacatcc agcttaaatt ggtcgggtgt ggttgtattg ttgttgccga
     4801 aattaaatgt gttccaaaga atacgtttgg cttgccaggt ttgcacacca ttctttaact
     4861 gctccggaaa ttttgttgga tccgccgctg cagtgaatgc ctctttagcg aggatggcgg
     4921 atgcggcatg atggccatga cctgctcttt catcgccagg gaagcgggta atgatcacgt
     4981 cgggctgaaa ttttcttatc acccacacaa cgtcgctcag aattttgtcg tggtcccatg
     5041 ttttcaaggc ttcgtccgcg gttttgcaaa aaccaaaatc gtacgcacgg ctgaagaatt
     5101 gctccgctcc atcgatcctt ctcgctgaca acaattcctg tgtgcgtatg agaccgagat
     5161 caatcccctg ctcatcgcct atcaaattct ggcctccgtc accgcgcgtt aagctcaaat
     5221 aaccggtgcg atataatttt tcttttgaga aatatgcgag cagtcgggtg ttctcatcat
     5281 cgggatgcgc ggcgatgtac aaaacgctgc ctaatacatt caatttttta agttgcagat
     5341 aaatgtctgc gctgctatag gcagccggcg cctgtgcgct cgaagaagtg aaaactgcac
     5401 acaaaagaat tgttgcagca atagcttgtc gtgaaatcgt attaaaaact cccattgaat
     5461 ttgcgaagat aatggcagga gatcgataaa ttctttgagg cacatccatc tttcaacgcg
     5521 gtgatgttca gaagctaaaa acgggttggt ctgttagccg ctatcgcatc ctactgctgc
     5581 tcttgcttgt taccttctct ttcatattgg cagcatttcg gaagtttatg ataagcgtcg
     5641 tcggttgctt tcacgtcctg ggtatcataa cccacggctg cgatttcttt ttcaatattc
     5701 acagccgaag tttgctcatt gttgtaactg atcacaagct ggtaattgtc agcattccaa
     5761 tccgcggata cagcgcccgc tttcaacgct gccttctcga tcttgccttt acattcgtca
     5821 cagtttcccc aaacttttag tgtatcggtg gtcgttgctg caaatacgtt agcagaacaa
     5881 aaaatgagca ggcataaaaa catgtatttc attttcatct tgaattcttt ggaacgcaaa
     5941 tataaggacg cgtcgccatc gcctttgtta taaaatttgt aagctcggcg ccaaatcgtt
     6001 ttatttcctt ccgagcatga aagcagccac tcctgaggaa atagttatcg tcgtggtact
     6061 acataaaaga tcggcaagcg cacctgcggt ggtaaaattg tttgtgcttc cgagcaaccc
     6121 gaagtcgaca gcacacaaca acaaaaatcc aaaaataatt cccgtcctta ggccagatat
     6181 aaacgtcctt gcgcccgacc acttggtcac ggtcgtaacc aggaaaccga ttgctattgc
     6241 ggaaagaacg acagcccacc agatcagttc gtcattcggt cggtacaatt gtttcatgaa
     6301 ctctggcgat acagccggat gtgtttgaaa gaagttaccg agaaagatca gaaacacaac
     6361 agcatttaag ataaaaagga taacagcggt tacaaaagct gagagcagaa agtttttggt
     6421 atgcatatat tttagttttc agaagcaagc agggcgccac agttaagttg catgaaaaaa
     6481 agacatcgtt ttacttgcac acctaagcat gacggctcca aaatggacgg acgaaattgt
     6541 ttcttc
//
LOCUS       DASQJI010000604        11709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_846018,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000604 DASQJI010000000
VERSION     DASQJI010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11709
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846018"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1272)
                     /locus_tag="VEV83_16425"
     CDS             complement(<1..1272)
                     /locus_tag="VEV83_16425"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HYK46766.1"
                     /translation="MRKIMFTPVLVVAWLMGYAQEINPPQKMGGREIILEKTECITDQ
                     ERVQIKAMLKSNQERLIREGKLKPAEQLTTAAVQFDWPLKQMPAYNYNCYYGISNFVD
                     HNVNYPGYVTDYNCGARSYDNAAGYNHQGTDIFIWPFSWLMMQRKQVEIIAAAPGIII
                     GKTDGNFDKSCQFNSNTWNAVYVQHADGSVAWYGHMKKGSLTTKNVGDAVVLNEKLGF
                     VGSSGNSNGPHLHFEVYNANGYLIDPWKGPCGNVASSWWKKQKPYYEPKLNTIFTQTK
                     GDPFVPLCPGTETTYESNYFLRHDTVYLVSYFKDERAGLVTKYKITRADKTVAAQWTY
                     TSPANYGLSYWYWYYVLPTNALLGTWKFQAIYQGDTLVRNFTVANSFAVNDAAAYAKN
                     DNAFILSPNPAHNDLKIELQTTGYPIYYKIYD"
     gene            complement(1386..2015)
                     /locus_tag="VEV83_16430"
     CDS             complement(1386..2015)
                     /locus_tag="VEV83_16430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK46767.1"
                     /translation="MNISIAIVEDLDEVRQGLHDFIVLKPEFYVIGVYKTAEGAIQEL
                     PLLKPDIVIMDINLPGVNGIECIKQLKQKIPHTQFMMFTVYENDENVFEALKAGATGY
                     LLKDTEMAQITEALKDLHNGGSPMSVTIARKLVSVFQKQQKENASTDILSNRENEILQ
                     LLSKGLLYKEISEKLSISVNTVRQHIHNIYEKLHVQNRTEALNKVYSKN"
     gene            complement(2064..4994)
                     /locus_tag="VEV83_16435"
     CDS             complement(2064..4994)
                     /locus_tag="VEV83_16435"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46768.1"
                     /translation="MKMFAAIFVCGCFLFPSLVCSQQYPFITYTRKDGLISNRVRKMY
                     QDSSGRLFFLTHGGLSIYDGARFTNYSTEDGLRNELINDVMEMDNDSFWIATNAPEIN
                     CLVRGKITKITTADGFCPVVNQLYRNKQGLLFAAADQGLFLFESNRFKHLQFSSDGKD
                     VGSFLHRIEAINDELMLVQVDAGGINEHSTLFLYNYKLQKIISSARAGDFGTKSAGLY
                     WVMTENGLRLIDVNELRQNKLQLRPLPFCYKSIATWVTNYVFFDRDGDLWLGSPDNFL
                     AKCDPQGKVTVFHSEKILSEALASEIFQDREGILWINFLQNGASKLPTTNVSLYDGVF
                     GLRNVSDMSCGHGRLIFYDAISNKLVLSDNSTRTYSVTGNVPVFGITSTTKGILAFSG
                     PDIYKLVPGGTNILKPVKVKMDNARIQTYNTAIEDNNGNYIASGEKYLAAVIDGSVAS
                     CAPINFVVDQLAKDRSGNIWVANRGHQLMKFSVHPETPEKYLHLERQYQIPESINVRA
                     ATFDSSNTLWIGSREDGLFEATFSNDKISLLQFSTREGLNDHFISYLACDENNLWCGS
                     PSGVDKLSFSKDNASIVNVTAPGNLFRRISKIIVRGDSVWALTGEGMIIQISAEKRKR
                     INYTPHFFLAYLKNGRDTIQPASSYKFSHVDNNPTFYFAATSFLQETQIRYKFRLNGG
                     SDTTWSDPSSNAFISFSNLPPGRYSLQARVSFPSARYADQAIEIPLTILPPWWETTWF
                     RMFVVICVAAMSYVAVKAYVRRKLAKQRVILERQQAIQKERTRIATDMHDDLGAGLSR
                     IKFLSEIVKLKQQSKQDTEEHVSRIGDYAKEMIGKMGEIVWALNEKNDSIGSLVAYTR
                     LYAAEYLAQNGIAGNVQTPENFPDVFLTGEIRRNIFLTVKEALHNVVKHANADTVVMN
                     VSVGNNIMITISDNGIGIDRDNIRPFSNGITNMQKRIHEIGGTLEIKNSNGTSVCIEV
                     PIGL"
     gene            complement(5058..6182)
                     /locus_tag="VEV83_16440"
     CDS             complement(5058..6182)
                     /locus_tag="VEV83_16440"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK46769.1"
                     /translation="MKIVAAFFLVFLNAFELAAQEQPAFVFNEGRLDSLLRHSYDDSL
                     PGVSIAILHQEKTIFKRSYGTSNIATKSRLTDSSNFNICSLTKQFTAVAILQLEQKHL
                     LSLNDKLSKFFPAMNKKVADVITIQQLLSHTSGIQDHYSFTNTTNMKHAHDSDVYNAI
                     KNVDSTYFTPGTKFRYSNTAYCLLAVIIEKVSGISYNEYLAKNIFEPAGMKNTIVWNE
                     NASIKNEVTAYEQDSLNNLVRSGPQEHIFFSTEGDGGIYTCIDDYIKWFRALQSGKTF
                     SISIVDKARSIQFMIDLHKKVGYGFGWFIDEQDPQRKVYHSGDNGGFRTYTFSIPTLD
                     YLIVIFSNRNDINIEQIVQQIVNMQFPSLKNFVPVEILTS"
     gene            6336..7622
                     /locus_tag="VEV83_16445"
     CDS             6336..7622
                     /locus_tag="VEV83_16445"
                     /inference="COORDINATES: protein motif:HMM:NF014696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HYK46770.1"
                     /translation="MNIVMQPLRLLLFAFAFIFFCACQGNNTNSAKDASYGKATKELV
                     DLVEKNPDLKALLIASIQKAKEINPDTATNPVQSLDQLYAYASKAETSVPWRLARDKQ
                     RPSTYHDIVMAFCAFYFVIDQPLPQLEGKGQFNNSVEYTEPFASWLTKFNKSWQEYLD
                     SDSSWNEGYYQTVLKDSSFGLQKGWYEDPSHWKTFNQFFARQLSSPAARPIASPGDNS
                     VVTSFADAVPQGVWAIDGNSNITDEQGVGVKTASIKSIAKLIGDESQYKDSFANGTLT
                     HSFLDVNDYHRYHFPVSGTIKEARIIHAINPTGGVLTWDKDQGRYKFDPSIAGWQMLE
                     TRGCVIVQTDQYGLVALLPIGMAAVGSVNLMDNVRAGATVNKGDVLGYFLFGGSDFIM
                     LFQNKVQFTLDAPKSADNRSYQHLLVGERLGHLGNK"
     gene            complement(7664..8161)
                     /locus_tag="VEV83_16450"
     CDS             complement(7664..8161)
                     /locus_tag="VEV83_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46771.1"
                     /translation="MKEVAQRFAFLRNAGETGELILKHDWSKTSIGNIEKWPLSLRVT
                     IYDVLHSGFPMFLFWGEEFLCFYNDGFRPSLGLNGKHPAIGKKAIVVWGEIWHIIGPL
                     LQKVFMTGVPIMLEDQLVPFSRNGKLEDIFWTFSYSPALGENDKISGVLVTCIETTKY
                     MMMKK"
     gene            8370..8690
                     /locus_tag="VEV83_16455"
     CDS             8370..8690
                     /locus_tag="VEV83_16455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase"
                     /protein_id="HYK46772.1"
                     /translation="MEHRLVSIRPFIGAGNYETSRRFYRDLGFEESVLSGDMSYFKTK
                     GIGFYLQNAYVKDWVDNTMVFLEVEDVNRYWNELVALNLTGKYERVRLTPIRIRLGQR
                     MFSA"
     gene            8687..9310
                     /locus_tag="VEV83_16460"
     CDS             8687..9310
                     /locus_tag="VEV83_16460"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK46773.1"
                     /translation="MTLREFYGISANFINSRPDCFFTKNTITFLSQGINMKDFPQLFT
                     DRLHLRKIHIDDIPLLVKYANNRKVSDHILNIPYPYQEPDAVFRIRYVNEGFKTSSRY
                     IFAIILKETEEFIGEISLHLDKKRMAQLAYWIGESFWKNGFVTEAIKAIMIFGFETLD
                     LDLIFATCDEKNIASIRVLEKNGFQKKGSAGSILQFAVERLKGKERP"
     gene            9365..10012
                     /locus_tag="VEV83_16465"
     CDS             9365..10012
                     /locus_tag="VEV83_16465"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK46774.1"
                     /translation="MKKKLLTTFDHIIFGAYSLDEGVDFIYQKLGVMPQQGGKHALMG
                     THNKLLKIGRSIYLEIIAIDPDAPKPSRPRWFGLDDLQPDARPKLLTWVVRTNDIHEA
                     VKKSGLKHGTIESFHRGIYKWFITVAADGAMLLQGIAPTIIQWRGIHHPAKDLPDSKV
                     SLVNIEAFHPEATLLNDSLNAMNYRGKFLAEPIQSNSKPLLRVTLNGPTGSAIFE"
     gene            10447..10914
                     /locus_tag="VEV83_16470"
     CDS             10447..10914
                     /locus_tag="VEV83_16470"
                     /inference="COORDINATES: protein motif:HMM:NF024106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative molybdenum carrier protein"
                     /protein_id="HYK46775.1"
                     /translation="MKIISGGQTGVDRAALDVALELHIECGGFCPKGRKSEDGMIPEK
                     YPLIETATEEYSERTRLNIKEADATFVLIDRQADKGALLTIELCKTHNKKLMEADLSG
                     RVDDKQVVQWILNNKITILNIAGSRETSSPGIYEKAYRLLRKVMIEIVARNLM"
     gene            complement(10945..>11709)
                     /locus_tag="VEV83_16475"
     CDS             complement(10945..>11709)
                     /locus_tag="VEV83_16475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46776.1"
                     /translation="RSETPAAANIVSNRRKESALSPKNSLLDTGNNKQTVARANDQQS
                     IRHSDSVSKSVSATQTLNAPAKHLSTLQVPNNQTASKIETAKEKDVTPAKKGFGDTSK
                     KQSLTPVAVAKNVAAKNETIQRKDSVALIDVDSLKEKMSRETELIRTYQVDSPHIQVD
                     LFDNGEIDQDIVSVYYNGQLIINHVTLTDTAISFHIEASAAHRYHEFILIAENEGSIP
                     PNTALMRIKAGRQQYKLTVSTSSTKNAKVAIDYLGY"
BASE COUNT         3253 a         2492 c         2554 g         3410 t
ORIGIN      
        1 gtcatagatc ttatagtata tcgggtaacc cgtagtttgt aattcaatct tcagatcgtt
       61 atgcgcagga ttaggcgaca gtatgaatgc gttatcattt tttgcataag cggctgcatc
      121 attcacggca aacgagttcg ccaccgtaaa gtttcgcacc agcgtatcac cctggtagat
      181 ggcctggaat ttccaggtgc ccaaaagcgc atttgtcgga agaacataat accaatacca
      241 atatgacaga ccgtaatttg ctggtgatgt atatgtccat tgagcagcca ccgttttatc
      301 agcccttgtt attttatatt tagttacgag gccagcgcgc tcatccttaa aataggatac
      361 caggtaaaca gtatcatgcc gcaaaaagta attactttca taagtggttt cagtccccgg
      421 acacaggggc acaaaagggt cacccttagt ttgcgtaaat atggtgttca gtttgggttc
      481 ataataaggc ttttgttttt tccaccagga tgaggccaca ttgccacacg ggcctttcca
      541 cggatcgatc aggtaaccat ttgcattgta tacttcgaaa tgcaaatgcg gaccgtttga
      601 attcccagag ctccctacaa agccgagttt ttcatttaat actacagcgt cgccaacatt
      661 cttcgttgta agtgaacctt ttttcatgtg cccgtaccag gccactgatc cgtcggcatg
      721 ctgcacatat acggcattcc aggtattact attgaactga caactcttgt caaaattgcc
      781 atcagttttg ccgatgataa tcccgggcgc ggctgctata atttcaacct gcttgcgttg
      841 catcatcaac caggaaaaag gccagatgaa aatatcagtg ccctggtgat tatagcccgc
      901 tgcattatcg tagctgcgtg caccgcaatt ataatcggta acatagccag gatagttgac
      961 gttgtgatca acaaagtttg aaataccgta gtagcagttg taattgtagg ccggcatttg
     1021 cttcaatggc caatcaaatt gtacagcagc ggtcgttaat tgttcagccg gttttaattt
     1081 tccttcccgt atcagccgct cctggttcga tttcagcata gcttttatct ggacgcgttc
     1141 ctgatccgtg atgcattcag ttttttctaa aataatttca cggccaccca ttttttgcgg
     1201 tggattaatt tcctgggcat aacccattaa ccaggcgacg accagtacag gagtaaacat
     1261 tatttttctc ataaataaat ttttggtcga aattagacag gcacaatgct catgtcaata
     1321 gcacaaaact gtaaaaggat gcagatgtaa gtagaacaaa agttagggtt atcctaatca
     1381 gaattttaat ttttgctgta aactttattc agggcttcag tgcggttttg tacatgcaat
     1441 ttttcataga tgttatgaat atgctgacgc actgtattca cagagatcga gagcttttct
     1501 gaaatttctt tatagagtaa accttttgag agaagttgta atatttcatt ttcccggtta
     1561 gaaagaatgt cagtggaagc attttctttt tgctgttttt gaaaaacgga aaccaatttt
     1621 cttgcaatgg tcacgctcat cggtgaaccg ccattgtgca ggtctttcaa tgcctcggtg
     1681 atttgcgcca tttcagtgtc tttaagcaaa taacctgtag cacccgcttt cagcgcttca
     1741 aaaacatttt cgtcattttc ataaaccgta aacatcataa actgtgtgtg tggaattttc
     1801 tgttttagtt gtttaatgca ttctatcccg ttaacacccg gcaggttaat atccataata
     1861 actatgtcag gctttaataa cggcagctcc tggatagctc cttccgctgt tttgtaaaca
     1921 ccaataacat aaaactcggg cttcaacacg ataaaatcat ggaggccctg tctaacttcg
     1981 tcgagatctt ccactatggc aatgcttatg ttcattatat ttcgaaggta aagtctgcga
     2041 taattgtttc aatagtacaa aagttataga ccgatcggaa cttctatgca aacactcgtg
     2101 ccattgctat tttttatttc aagcgtaccc ccgatttcgt gtatccgctt ttgcatgttg
     2161 gttattccat tactgaacgg ccgaatatta tcccgatcta ttccgatgcc attatcagaa
     2221 atggtgatca tgatattatt tccgacagat acattcataa ccacggtatc agcatttgcg
     2281 tgctttacta cattgtgcaa tgcctccttt acagtgagaa aaatatttcg tcttatctcg
     2341 cctgtcagaa atacatcggg aaaattttca ggagtctgga catttcccgc aattccgttt
     2401 tgtgccaaat attcagcggc gtacaatctc gtataagcca ccaggctgcc aattgaatca
     2461 ttcttttcat tcaatgccca aacaatctct cccatcttgc cgatcatttc tttggcataa
     2521 tcccctatcc ttgaaacgtg ttcctctgta tcctgtttag attgttgttt caattttacg
     2581 atctcgctta gaaactttat acgggacaag ccggcgccga gatcgtcatg catatcggta
     2641 gcgatacgtg ttctttcttt ttgaatcgcc tgctgtcttt caagtatcac gcgttgtttc
     2701 gcaagttttc ttcggacgta tgctttcaca gcaacgtagg acatggcagc gacgcagatc
     2761 acaacgaaca tcctgaacca tgttgtttcc caccatggag gcaaaatcgt tagtggtatt
     2821 tcaatggcct ggtcggcgta acgtgccgaa ggaaacgaaa ccctggcttg cagagaatat
     2881 cgtccgggtg gaagatttga aaaactgatg aaggcattag aggatggatc agaccatgtt
     2941 gtatcgctcc caccattcag gcggaatttg taccggatct gcgtctcctg taaaaacgat
     3001 gtggctgcga aataaaatgt ggggttatta tcgacgtgag aaaatttgta ggaagaagca
     3061 ggctggatag tatcgcggcc gtttttcagg taagcgagaa aaaaatgcgg cgtgtaattt
     3121 atccgtttcc ttttttccgc gctgatctga atgatcattc cttcgccggt tagagcccac
     3181 actgagtcac ctcgcacaat aattttgctt attcttcgaa aaagattgcc gggcgctgta
     3241 acgttaacaa tcgatgcatt gtctttgcta aaactcagtt tgtcgacacc cgaaggggag
     3301 ccgcaccata agttgttttc atcgcaggcc aggtaagaga taaagtgatc gttcaatcct
     3361 tctcttgttg aaaattgcaa aagcgatatt ttgtcgttgc tgaatgtcgc ttcgaagagg
     3421 ccatcttccc ggctccctat ccatagggtg ttggaagaat caaaagttgc ggcgcggaca
     3481 ttgatacttt caggaatttg atattgcctt tcaaggtgca gatatttttc gggcgtttcc
     3541 gggtgcacgc taaatttcat caactggtgt ccccggttcg cgacccatat atttcctgaa
     3601 cgatcttttg cgagttggtc gaccacaaag tttataggag cgcatgaggc aacgcttccg
     3661 tctatcaccg ctgccaggta cttttcaccg ctcgcaatgt aattgccgtt gttgtcctcg
     3721 atcgcagtgt tatacgtttg tatgcgagcg ttatccattt ttaccttgac aggttttaag
     3781 atattagttc cgccgggtac cagtttgtaa atgtcaggtc ctgagaaggc gagaatacct
     3841 tttgttgtag acgtgatccc aaaaacgggc acattgccgg taacggagta tgtccgcgtg
     3901 gagttatctg acagaacgag tttgtttgat atcgcatcat aaaagataag tcgaccatgt
     3961 ccgcagctca tatcagaaac gttgcgaagt ccaaacactc catcgtacag cgaaacatta
     4021 gtggtgggca gtttgctcgc tccgttttgt aagaagttga tccataaaat gccttcccgg
     4081 tcctggaata tctcgctcgc cagcgcctcg ctcaatattt tttcactgtg gaaaacggtg
     4141 acctttccct gtggatcaca tttcgcaaga aaattatccg gcgaacccag ccacagatca
     4201 ccgtcccggt cgaagaatac ataatttgtt acccacgtgg caattgattt ataacaaaag
     4261 ggcaatggcc ttagctgaag tttattttgt ctcagctcgt ttacatcaat taagcgcagt
     4321 ccattttccg tcattaccca ataaagacct gcagacttag ttccaaagtc gccagcacgg
     4381 gctgacgaaa taattttttg cagtttataa ttgtaaagaa aaagagtcga gtgttcattt
     4441 atgccgccgg cgtcaacctg tacgagcatc aattcatcgt ttatcgcttc aatacggtgc
     4501 agaaacgaac caacatcttt gccgtcagag ctgaactgta aatgtttgaa ccggtttgat
     4561 tcaaatagaa aaagcccctg gtcagccgca gcgaaaagca gtccctgctt gttacgatag
     4621 agttggttga ccacggggca aaagccatcc gctgttgtaa ttttcgtgat ctttcctcgc
     4681 accaggcaat ttatctccgg cgcgttcgtc gcgatccaaa acgaatcgtt atccatctcc
     4741 attacatcat ttatcaattc gttcctgaga ccatcttcag tgctatagtt cgtaaacctt
     4801 gcgccgtcgt aaatgctgag cccgccatgc gtaagaaaaa aaaggcggcc gctgctatcc
     4861 tggtacatct tgcgaacccg attgctgatc aacccatctt tcctggtata tgttatgaaa
     4921 ggatattgct gcgagcagac aagagaagga aacaaaaaac atccgcatac aaatattgca
     4981 gcaaacattt tcattcctaa atgtaaagca aaaatttgct ccgcgtcgtt gcctacgtct
     5041 tatttgtgtt gcatcgttta cgaagtcaga atttcaaccg gcacaaagtt cttgagagaa
     5101 gggaactgca tgttcactat ttgctgcacg atttgttcga tgttgatatc attgcggttt
     5161 gaaaagatca ctatgagata atccaaagtc ggtatgctaa atgtgtaagt tctaaagccg
     5221 ccattatccc cactgtgata gacttttcgt tgcgggtcct gctcatcaat aaaccatcca
     5281 aacccataac caactttttt gtgcagatcg atcataaatt gaatactacg cgctttgtca
     5341 acaatggata tactgaacgt tttgccagac tgcagcgcac gaaaccattt gatataatca
     5401 tcaatgcatg tataaatgcc gccatcacct tcggttgaaa aaaatatatg ttcttgcggc
     5461 ccggatctta ccaggttatt tagactgtcc tgttcatacg cggtaacctc gttttttata
     5521 cttgcatttt cattccagac aatggtattc ttcataccgg ctggttcaaa aatgtttttc
     5581 gccagatact cattatagct gatgccgctt actttttcaa tgatcaccgc gagcaaacaa
     5641 taggcggtat tactatagcg gaattttgtg ccgggtgtaa aataggtcga gtcaacattc
     5701 ttgatagcgt tatacacatc gctgtcatgc gcatgcttca tgttggttgt gttggtaaag
     5761 ctgtagtggt cctgaatgcc ggacgtgtgg ctgagcaatt gttgtatggt gataacgtcc
     5821 gcgacctttt tgttcatggc aggaaaaaat ttgctgagct tatcgtttaa cgacagtaaa
     5881 tgtttttgtt cgagttgtaa aatggcaacg gctgtgaatt gcttggtgag tgaacaaata
     5941 ttaaaattgg acgagtcggt aagtctactt tttgtggcaa tgttgctagt gccgtagctt
     6001 cttttaaaga tggttttttc ctggtggagt attgcgatgg aaacacccgg caatgaatcg
     6061 tcgtaagaat ggcgtaaaag tgaatcgagt cttccttcgt tgaagacgaa tgctggttgc
     6121 tcttgcgctg ccagttcgaa agcgttcaag aagacaagaa aaaaagccgc aactattttc
     6181 atgattgaaa gtaatgattc ctatgaaggc aaaggttcaa tttttcgata gccggagaaa
     6241 gggttccggt ttccaagatc tattgcgtaa gtttacccac agccgtcagc atatgagatg
     6301 atggtggaac aatcagactt caaaaagtta tgcttatgaa tatagttatg caaccgctgc
     6361 gtttactact ttttgctttt gcttttattt tcttctgcgc ctgccagggc aataatacta
     6421 actcagctaa agatgcttca tatggcaagg ctacaaaaga actggttgac ctggttgaaa
     6481 agaacccgga cctaaaagct ctgctgatcg cttcaataca aaaagccaaa gaaataaatc
     6541 ccgacacggc cacaaacccg gtgcaatcat tggatcagct ttatgcatac gcctcgaaag
     6601 cggaaacttc agtgccatgg aggctcgcac gagacaaaca acgtccctca acatatcacg
     6661 acatagtgat ggcattttgt gccttttact ttgtcatcga ccagccactg ccgcaacttg
     6721 aaggcaaagg acaattcaat aactcagtgg aatacaccga gccgtttgct tcctggttaa
     6781 caaaatttaa taaatcgtgg caggagtatc ttgattcaga cagctcatgg aatgagggtt
     6841 attaccaaac ggttttgaaa gattcctcct tcggtttgca aaaggggtgg tatgaagatc
     6901 cttcgcattg gaaaacattc aaccaattct ttgcaagaca attgagttcg ccggccgcac
     6961 gaccgatcgc gtctcccggc gacaattcag ttgttacctc ctttgctgat gcagtgccac
     7021 aaggcgtctg ggcgatcgac ggcaattcta acatcacaga tgaacaagga gtgggtgtga
     7081 agaccgccag tataaaatcg atcgcaaagc ttataggcga cgagagtcaa tacaaagatt
     7141 cattcgccaa tggaacactg acacattcgt tccttgatgt aaatgattac catcgttacc
     7201 actttcctgt gagtgggacg ataaaagaag cgcgcatcat ccatgcaatt aatccaacag
     7261 gcggtgtgct tacatgggat aaagaccagg gcagatataa atttgatccg tctattgcgg
     7321 gctggcagat gctcgagaca agaggttgcg tcatcgtgca gactgatcaa tatggattag
     7381 ttgctttgct gccgattgga atggcagctg tgggttcagt aaatcttatg gacaatgtga
     7441 gagccggtgc cacggtaaat aaaggagatg tgctgggata ttttttgttt ggtggttctg
     7501 atttcattat gctgtttcaa aacaaagttc aatttacgct ggatgctccg aaaagcgctg
     7561 acaaccgttc gtaccagcac ctcctggtgg gtgaacgact cgggcatttg ggtaacaaat
     7621 agaagaattg atctttgcct gtagttgcaa cttctggtat caattacttt ttcatcatca
     7681 tgtattttgt ggtttctata catgtgacca ggaccccgga aatcttgtcg ttctcaccaa
     7741 gtgcagggct ataactaaag gtccagaaaa tgtcttcgag ttttccattg cgcgaaaacg
     7801 gcaccaattg atcttccagc atgatcggca caccagtcat gaagactttt tgcaacaatg
     7861 ggcctataat atgccagatc tcaccccata ccactatcgc tttctttcca attgcgggat
     7921 gcttgccatt tagacccagg ctcggccgaa agccatcgtt gtaaaaacaa agaaactctt
     7981 cgccccaaaa aaggaacatg ggaaatccgg aatgaagaac gtcgtaaatg gttactcgca
     8041 agcttaaagg ccatttttcg atattaccaa ttgaggtttt tgaccagtcg tgcttcagaa
     8101 tcagctctcc tgtttcacct gcattcctca aaaatgcaaa tcgctgagca acttctttca
     8161 ttgtatttac tgcaaaattg tgggcggtaa atgtatactt tttttcttag cccgatagcc
     8221 tcatgcaagc ggctttcagc gggaaagttg ttccagctta aacaatacga tctaacaaac
     8281 tgaatattat gcgcatcaat tggcaacata aaattatctg tgattgaaac gctcaagtgc
     8341 atttgtattt ttacaaaaag ggagacaaca tggaacacag gctcgtttca atacgaccat
     8401 tcataggagc cgggaattat gagacatcac gacgcttcta tcgcgacctc ggatttgagg
     8461 aaagcgtttt atcaggagat atgtcttatt tcaaaacgaa aggcattggc ttttacctgc
     8521 agaatgcgta tgtaaaagat tgggtcgata atacgatggt tttcctggag gtggaggatg
     8581 ttaatcgcta ctggaatgaa cttgtggctt tgaatctgac gggcaagtat gagcgggtgc
     8641 gacttacgcc gatcagaata cgattggggc aaagaatgtt ttctgcatga cccttcggga
     8701 attctatggc atttcggcga atttcataaa cagccgacct gattgttttt tcacgaaaaa
     8761 caccatcact tttctttcac agggaataaa catgaaggac tttccgcaat tatttacaga
     8821 caggttacat cttcgaaaaa ttcacatcga cgatattccc ttgctagtaa aatatgcgaa
     8881 caatagaaaa gtatcggatc acatcttaaa cataccatat ccttaccagg agccggacgc
     8941 tgtcttcagg atccgctatg tgaatgaggg attcaaaaca agttcacgtt acattttcgc
     9001 gataatttta aaagagaccg aagagtttat tggcgagatc agcctgcatc tcgacaaaaa
     9061 gcgaatggcg caattagctt actggatcgg agaatcgttt tggaaaaatg gatttgtaac
     9121 agaagcaata aaggcgatca tgatatttgg atttgaaacc ctggatcttg atctcatatt
     9181 tgcaacctgt gatgagaaga atatcgcatc gatcagggtg cttgaaaaaa atggtttcca
     9241 gaaaaaaggc tcggccggaa gtattcttca atttgctgtt gaacggctga aaggaaaaga
     9301 acgaccataa tgctcacgaa cggcaaatag tttaatacga aaatgcgcaa cgaatatttt
     9361 tagtttgaag aagaaactcc taacaacatt cgatcacatc atttttggcg cttactcgct
     9421 tgatgaaggt gttgatttca tctatcagaa gcttggagta atgccccagc aaggaggaaa
     9481 gcatgcgctg atgggcacac ataataaact gctgaagatc ggccgttcaa tttatcttga
     9541 aattattgcg atcgatccgg atgcgcctaa gccgagcagg ccacgttggt ttggccttga
     9601 tgatctgcaa ccagacgcga ggccaaagtt gcttacctgg gtcgtgcgta ctaacgacat
     9661 tcacgaggca gtgaagaaat caggattaaa acatggaacg atcgaatcct ttcaccgtgg
     9721 aatttacaaa tggttcatca ctgttgctgc agatggcgcg atgcttctgc aaggcattgc
     9781 cccgacgatc atacaatgga gaggcataca ccatccggct aaagatcttc cggattcaaa
     9841 agtttcgttg gtaaacattg aagcgtttca tccggaggca accctgctga atgattcgtt
     9901 aaacgctatg aattatcgtg gaaaattttt ggctgaacct atacagtcaa acagtaaacc
     9961 attgctgaga gtaactctta atggtccgac tgggtcagca atatttgaat agtaaagata
    10021 ttgcagttgg agttttcggc aaataacttg gttaagtgcg gcgcgttcgt tcgtgctttt
    10081 cagcagcgca cacctccttc agcagtatgt tgaagcatca caaaaatgcg ttcgtgtttg
    10141 tcggtgcggt cggttattca gcaggtaaaa aaaataaaag aaccgcttaa aagtagcggt
    10201 tctgttctcc aaggttagca acgctcagcg atcaaaaaaa tagccgtttc ttagcaggaa
    10261 actaaaaagc ggctgtgtag atatcaaaca aaaagccgcg agtcggtagt tacacctcat
    10321 aagcggcttt tgctgttttt tgaagacgtg aaataataaa aaaacataat tatagcaagc
    10381 gtgcggcagt tagaaaaatc gattttgcgg taacgaagcc agagcctaat ctgaaaacat
    10441 cttactatga aaataatttc cggtggacaa acaggagtgg atcgtgcagc actcgatgtt
    10501 gcgctcgaac ttcacatcga gtgtggaggg ttttgtccaa aggggcgaaa aagtgaagat
    10561 ggtatgatcc cggaaaaata tccacttatc gagacagcga ctgaagaata ttccgagcga
    10621 acccggttga atataaaaga ggctgatgct acgttcgttt tgattgacag acaggcggac
    10681 aaaggcgcat tgcttaccat agaattatgc aagactcaca ataaaaaatt aatggaagct
    10741 gacctttccg gaagggttga cgataagcag gttgttcaat ggatattgaa caacaagatc
    10801 acaattttaa atattgccgg cagtcgcgaa acttcatcgc cgggtattta tgagaaagcg
    10861 tatcgactgt tacgaaaagt aatgattgaa attgttgcac gtaacctcat gtaaatctat
    10921 ccatcaaaat attgtgtgaa ataatcaata cccgaggtaa tcaattgcaa cttttgcatt
    10981 tttcgtgctg ctggtgctca ccgtcaattt atattgttga cgaccggctt tgatgcgcat
    11041 caaggcggta ttgggtggta tggacccttc attctcagcg atcaaaatga attcatgata
    11101 acgatgtgcg gcagaggctt caatatgaaa gctaatggct gtatccgtta aggtaacatg
    11161 gttaatgata agctgaccat tgtagtaaac cgatacaata tcctggtcta tttccccatt
    11221 atcgaaaagg tcaacctgga tatgcggtga atctacctgg tacgttcgta tcaactctgt
    11281 ttcgcggctc attttctcct ttaaggaatc gacatctatc agtgcgacgg aatctttcct
    11341 ttgaattgtt tcgtttttcg ccgctacgtt ttttgccacg gcgacaggtg tcaaagattg
    11401 ctttttactc gtatccccaa aacctttctt tgctggcgta acatcttttt cttttgctgt
    11461 ttcgatttta gaagctgttt gattgttggg tacctgcaat gttgacaaat gtttcgccgg
    11521 agcgttcagc gtttgagttg cactaacact ttttgaaacg gagtccgaat gtctgatcga
    11581 ttgctgatca tttgccctgg cgacagtctg tttattatta ccagtatcga gcagactatt
    11641 ttttggtgaa agcgcactct cttttcttcg gttgctgaca atgttagccg ctgctggtgt
    11701 ctcacttct
//
LOCUS       DASQJI010000605         9419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1304734,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000605 DASQJI010000000
VERSION     DASQJI010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9419
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304734"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VEV83_16480"
     CDS             complement(<1..185)
                     /locus_tag="VEV83_16480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF520 family protein"
                     /protein_id="HYK46777.1"
                     /translation="MPSFDIASKVDLQTLDNAVNTAKKEVTNRFDFRDSHVQIDLNKK
                     DYIVTLEVESEMKMKQL"
     gene            397..1872
                     /locus_tag="VEV83_16485"
     CDS             397..1872
                     /locus_tag="VEV83_16485"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HYK46778.1"
                     /translation="MKKHFKRIAYPLLILIIAASCSSTKYASAQNDDYYNNNGSNDNR
                     DYNDDRSYNPNDDQNYDDQNYDQQDNDYNYNDQDDDYTYDNGDNYEEDPSDVTIDDFD
                     DALSPYGRWETSPSYGRIWVNNDPGFVPYSTGGHWLYTSYGWTWASDYSWGWAPFHYG
                     RWAYDPFFGWSWIPGYEWGPAWVAWRTGGGYYGWAPLGPGMSFGVSYYNTIPYNRWVF
                     APNRYMGSPYIHRYYVAPQRNQLIIRNTSFVTNTIVYHNRRFVAGPNRVEVERYTGHR
                     VDMVRIQNSTRPGKTVINNNTLNIYRPGVKARVQQKIDNRTQDNTNRNHQTQPNYNDR
                     QSGHNNNTQRQDQNITRQNQNHSAPDYNQQRQQQIDREREMNRQREIQQQQQQYRQQA
                     PSQTDRQHNRPPDQSDRIQSMERQRQQMYQNQKEQLQQRQIENDKPQVSDRREAMVNR
                     GTQLNNQRQEQFNSHRQEQPVYRQQSQQEWHGGGNGKNKKD"
     gene            1984..2499
                     /locus_tag="VEV83_16490"
     CDS             1984..2499
                     /locus_tag="VEV83_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46779.1"
                     /translation="MDTSSIIFIVVLTVLVTASVVYIITTRMKTATEDGTIIRDNPTT
                     KPMQLQAYERLLILVDRIALPHLISRVSQPHASARDMQLLLTQNIRSEFDYNITQQIY
                     VSPDAWTAVKNLKEQNLLIVNQLATVLPPNATALDLNKLLLEFLMNDKKGSLHEVVSE
                     ALSYEAKKLMQ"
     gene            2524..4098
                     /locus_tag="VEV83_16495"
     CDS             2524..4098
                     /locus_tag="VEV83_16495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HYK46780.1"
                     /translation="MPDEKRCFTDSGIEIKSIYTAEDLSHLNTDYLNEHPGQFPFTRG
                     VQADMYRSRLWTMRQYAGFSTAEESNKRYHYLLSQGVMGLSVAFDLPTQIGYDSDHPL
                     AEGEVGKVGVAIDSIRDMADLFHGIKLEEVSTSMTINATGFILLSLYVALAKQQGADL
                     KKISGTIQNDILKEYAARGTYIYPPKPSMRIITDIFEWCGTELPKWNTISISGYHIRE
                     AGSTAVQEIAFTLSNGKAYVKAALEKGLDINVFGKRLSFFFNAHNNLFEEVAKFRAAR
                     RMWAKMMKGLGATDAKAMMLRFHTQTGGSTLTAQQPLNNISRVTVQTLAAVLGGTQSL
                     HTNGYDEALSLPTEEAARIALRTQQIVAYESGVTDTVDALGGSYFVESLTDAVEMEAW
                     KLIEKIDEMGGSVNAIEQGFIQNEIARSAYEYQRGIESNKRIIVGLNKFVADEKNSVP
                     PFRIDDSIRILQSEKLRKLRSERDNAVAEQCLQNISTAAKENSNLVPRVIDAVENFCT
                     LGEIADELRNVFGEYK"
     gene            4173..4952
                     /locus_tag="VEV83_16500"
     CDS             4173..4952
                     /locus_tag="VEV83_16500"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYK46781.1"
                     /translation="MKTQFRLLTLFVCIVCTTKTYSQDGYNYVGIKGGISIPNLTAGG
                     TENPLASGYSSRQGPDFAVFFQKGISEKFSVMAQLEYSSQGGKKNGVQAVPTPPELAA
                     VFAQLGLNPPAYVYADFDNEVKLNYLLFSVLGKFSFRLSEESPLSIYADAGPFGGYLL
                     SAHTVTSGSSEIYLDEQGQQSITPGAPVSFDSTVDIKDQLHTGNFGITGDLGLSFDFG
                     SNRLFIEGGGNYGFVAIQNDPANGKNHTGAATLRIGYAFNF"
     gene            5102..6559
                     /locus_tag="VEV83_16505"
     CDS             5102..6559
                     /locus_tag="VEV83_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 30 beta sandwich
                     domain-containing protein"
                     /protein_id="HYK46782.1"
                     /translation="MNYISKNRWFFILPVLFATLMFLACRKMIASATRSPNTSSATVA
                     GDVTFWLTKGDQSVLLQKQNVNLVFGNVSNRYATITVDTTQNFQSIDGFGYTLTGASA
                     YLINHMSTASRDALLRELFAGDSNSVSVSYLRVSVGASDLSLNVFSYDDMPQGQTDVS
                     LQNFSLAPDQTDVIPVLKLILAINPNIKILGTPWSPPVWMKTNGSSVGGSLQPQYYNV
                     YANYLVKYVQGMKAQGITIDAITPQNEPLNPNNNPSMYMTAIQEDSFVRYNLGPVFQS
                     NNISTKIILYDHNCDHPEYPTSILDDASTRPYVDGSAFHLYAGDISALTTVHNAYPAK
                     NLYFTEQYTASNGNFGNDLKWHLKNVIIGSMRNWSRNALEWNLANDATFSMHTPGGCT
                     TCKGAVTVSSNTVTRNVAYYIVAHASKFVPFGSIRIASNISGSLNNVAFKTPSGKKVL
                     IVENDGHSSQNFNIAFNGKSVTTSLPAGGVGTYVW"
     gene            complement(6625..8256)
                     /locus_tag="VEV83_16510"
     CDS             complement(6625..8256)
                     /locus_tag="VEV83_16510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HYK46783.1"
                     /translation="MKKLSSLVAFLLLTSAVFSQLTGENAPQVKTVNGILEGTNESGI
                     RVFRGVPFAAPPVGEFRWREPQPVKNWTGVRKADKFGPRAMQLNVFGDMNFRSNGMSE
                     DCLYLNVWTPAKSGNEHLPVLVYFYGGGFLAGDGSEPRYDGESMARHGIVAITVNYRL
                     GVFGFFAHPELTKESPHHASGNYGLLDQSAAIKWVQQNISAFGGDPKKITIAGESAGS
                     FSVSAQMASPLSRNIIAGAIGESGSLLGLMPTASLNDAENAGSKWAQGIQKNSIADLR
                     SMSADDVLKATASAAFGTFPVAVDGYFFPKSPTEIFQKGEQAHVPLLVGWNSEEMTYR
                     MVMGKDSPTVANYTKAVQKLYGDKSADALKVYNASTDADVEQVATALSGDRFIGYSTW
                     KWSDVHSRTGGKPVYRYLYARPRPGMRAEMGNATAGLAGGVTKDTSSKAKAPAMPLPR
                     GAVHSAEIEYALGNLPTNRVYDWQAEDYKVSEIMQSFFVNFIKTGDPNGLGVPWWPAV
                     DNAKGVDVMRIDVDTHAHRDNTSERYLFLEQAAKK"
     gene            complement(8558..>9419)
                     /locus_tag="VEV83_16515"
     CDS             complement(8558..>9419)
                     /locus_tag="VEV83_16515"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HYK46784.1"
                     /translation="PIPNSQYFLSFSKFSAMKSIVTSVSIFLSVIFIAATNVKGQDLS
                     QVLSKGKWIDLSYDLSSETLYWPNNPTGFKLDTIFEGMSPAGFYYSTYAFSAPEHGGT
                     HLDAPIHFSEHGLTIDKLPLEKLTGDAVVIDVSAKALNDRDYLISVNDIADWESKNGK
                     ISENTIVLFKTGYGQFYPNREKYFGTSETGAGAVPKLHFPGIDSTTASWLVQHKIKAV
                     GIDTPSMDYGQSKNFKTHQILLGASIPGFENVANMNLLPVRGTYIIALPMKIKNGSGG
                     PLRIVAWVKT"
BASE COUNT         2759 a         2107 c         2114 g         2439 t
ORIGIN      
        1 atcaattgtt tcatcttcat ttcactttct acttccagtg tcacgatgta atcttttttg
       61 tttaggtcga tttgcacatg cgaatcacga aagtcaaacc tgttcgttac ttcttttttt
      121 gccgtattta cagcattgtc caacgtctgg agatcgactt tgcttgcgat atcaaaagat
      181 ggcatactaa tattttaata aagctaataa aatgctgaag tgtcagcaaa gatgtagaac
      241 aaaagttaac gattaacaaa tttttccggg tattaaacta tgctatacat accgagtcaa
      301 aaaaacggta aaacaaaacg ccctattttc ttttggaata actcttgaac tacatataga
      361 aacaattcaa caacgaaaca ttcacaacaa acaagtatga aaaaacattt taaaaggatt
      421 gcatatcctc tgctgatatt aataattgcc gcttcatgca gttcgacgaa atatgcgtct
      481 gcacagaacg acgattatta caacaataac ggcagtaacg acaaccgcga ttataacgat
      541 gatcgcagtt acaaccctaa tgatgatcag aattacgacg accagaatta tgatcagcaa
      601 gacaacgatt ataactacaa cgaccaggat gatgattata catacgacaa cggcgacaac
      661 tatgaagagg atccttcaga tgtcacaatt gacgatttcg acgatgcatt aagtccttac
      721 ggtcgctggg aaacgtcgcc ttcttacggt cgcatttggg ttaataacga ccccggcttt
      781 gttccttatt caacaggtgg acactggttg tatacttcat atggatggac gtgggcttca
      841 gactattcat ggggttgggc tcctttccac tatggccgct gggcatatga tccgttcttc
      901 ggatggagtt ggattcccgg ttatgaatgg ggtccggcat gggtagcatg gagaactggt
      961 ggtggatatt atggttgggc acctcttggt cctggaatga gttttggcgt tagctattac
     1021 aacaccattc cgtataaccg ctgggtattt gcaccgaacc gctatatggg cagtccatac
     1081 attcacaggt actatgtagc gccgcaacgt aatcaactta tcattcgcaa tacaagcttt
     1141 gttacaaata ccatagtgta tcataatcgc aggtttgtag caggtccaaa ccgtgttgaa
     1201 gtagaaaggt atacgggaca tcgcgtagat atggtgcgca ttcaaaattc aacacgtccg
     1261 ggcaagaccg tcatcaataa taacacgctg aatatatatc ggccaggtgt gaaagcgagg
     1321 gttcagcaaa agatcgacaa cagaacccag gataacacaa acagaaatca tcagacgcag
     1381 cctaattata acgacaggca aagcgggcac aataacaaca cgcaaaggca ggatcaaaat
     1441 ataacccggc aaaatcaaaa tcatagcgcg cctgattaca accagcaaag gcaacagcag
     1501 atcgacaggg aaagggaaat gaaccggcag agagaaatac aacaacagca acaacaatac
     1561 aggcagcagg ctccttcgca aactgacagg caacataatc gtccgcccga tcaaagtgac
     1621 aggatccaaa gcatggaaag gcaaagacag cagatgtatc agaatcaaaa agaacaactg
     1681 caacaaagac agatcgaaaa tgacaagcca caggtaagtg acagaagaga agcaatggta
     1741 aacagaggaa ctcagttgaa taatcaaagg caagaacagt tcaatagtca caggcaagaa
     1801 cagccggttt acaggcagca gtcgcaacaa gaatggcacg gcggtggaaa cggtaagaac
     1861 aagaaagatt aataaacaag aaaataaact ttaggaaagt cctgcattat gcgggacttt
     1921 tcttttgttg tgaaatatag atcgatattt cgtggatttg ttactttgca gaaaacatat
     1981 cgcttggata caagttcaat aatttttatc gtggtactta ccgtcctcgt aacagcgagc
     2041 gtcgtttaca tcattactac ccggatgaaa acagcgaccg aagatggaac gatcattcgg
     2101 gataacccaa ccaccaaacc aatgcaattg caggcatatg aacgtttatt gatcctcgtt
     2161 gaccgcattg ctctgccgca tctgatcagc cgcgtaagcc agccacacgc gagcgcacga
     2221 gacatgcagc tattgctcac gcaaaatatc cgatcggaat ttgattacaa cataacccag
     2281 cagatatacg tttcgcctga tgcatggacc gcggtgaaaa atctgaaaga gcaaaacctc
     2341 cttattgtta accagctcgc gactgtgctt ccgccgaacg cgaccgccct cgatctgaac
     2401 aaattgttgc ttgaattttt gatgaatgac aaaaaaggaa gcttgcacga agtagtgagc
     2461 gaagcgctca gctacgaggc aaaaaaatta atgcagtaga ttatcatctc gtaaatattt
     2521 tttatgccgg atgaaaagag atgtttcaca gacagtggga tagaaataaa aagtatttat
     2581 accgcggagg atctgtcaca tcttaacact gattatctga atgaacatcc gggccaattt
     2641 ccttttacaa gaggcgtgca ggccgatatg taccgcagca ggctttggac catgcgccaa
     2701 tacgccggct tttctaccgc ggaagaaagt aataagcgct atcattattt gttgtcgcag
     2761 ggagttatgg gtttgagtgt tgcatttgat cttccgacgc aaattggtta tgacagtgat
     2821 catccacttg cggaaggaga agtcggaaaa gtaggcgtcg cgatcgacag tatccgcgat
     2881 atggcagatc tgtttcacgg cattaagttg gaagaagtga gcacttcgat gacgatcaat
     2941 gcaaccggtt ttatcttgtt aagcttatat gttgcacttg cgaaacaaca gggagcagat
     3001 ctaaagaaaa tttcaggcac gatccaaaat gatatcctca aagaatacgc agccagaggt
     3061 acttacattt atccacccaa accttcaatg cgcatcatta cagacatttt tgaatggtgc
     3121 ggaaccgaac tgccgaaatg gaatacgatt tccatctcgg gctatcacat tcgtgaagca
     3181 ggaagcacag cagtacagga aatagcgttt acgctgagta atggcaaagc atatgtaaaa
     3241 gccgcattag aaaaaggact tgacataaat gttttcggaa aacgtctttc attttttttc
     3301 aacgcccaca acaatttgtt tgaagaggtt gcgaaatttc gtgcagccag aagaatgtgg
     3361 gcgaagatga tgaaaggcct gggtgcgacg gatgcaaagg cgatgatgct gcggtttcat
     3421 acacaaaccg gcggaagcac gctaacagcg caacagcctt taaacaatat ttcaagagtt
     3481 accgttcaaa cactcgcggc agtattggga ggcacgcaaa gcttgcatac taacgggtac
     3541 gacgaggcct taagtctgcc gactgaagaa gcggcgcgca tcgctttgcg aacccaacaa
     3601 atagtggctt acgaaagtgg cgttacagat acagtggatg cgcttggcgg aagctacttc
     3661 gtagaatcgc ttactgatgc cgtggagatg gaggcgtgga aactgattga gaagatcgac
     3721 gaaatgggcg gaagcgttaa cgcgatcgaa cagggattca ttcaaaatga gattgcccga
     3781 agtgcgtacg aataccagcg aggcatcgaa agcaataaaa gaattatcgt gggcctaaac
     3841 aaatttgtgg ccgacgaaaa aaattctgtt ccgccgttta gaattgacga cagcatcaga
     3901 attcttcaga gcgaaaaatt aagaaagctt agaagtgagc gcgacaacgc tgtcgctgaa
     3961 caatgtttgc aaaacatctc aactgctgcc aaagagaatt cgaatcttgt gcctcgcgta
     4021 attgatgcgg tggagaattt ttgcacgctg ggagaaattg cggacgaact tcgaaacgta
     4081 tttggagaat ataaatagtt ctgcaggcag gtggaaaact atgtggtaag ctaatccgaa
     4141 tagcacatta aatttagctc taaaacgtaa acatgaaaac ccaattccgc ctgctcacgc
     4201 tttttgtttg cattgtatgt acgacaaaaa cctactctca ggatggatac aattatgtgg
     4261 gaataaaagg tggtatcagt ataccaaatc ttaccgccgg tggtacggaa aaccctttgg
     4321 cgtcaggcta tagttcgagg cagggccctg atttcgcagt attttttcaa aagggaatca
     4381 gcgaaaaatt ctctgttatg gcgcagctcg agtactcctc acagggcggt aaaaagaatg
     4441 gagtgcaggc ggtgccaacg ccgccagaat tggctgctgt ttttgcgcaa ttaggactga
     4501 atccaccggc atacgtatat gccgatttcg acaatgaagt taaattgaat tatctcttgt
     4561 tcagcgtcct cggaaagttc agttttcgcc tcagcgaaga atccccgctt tcgatctatg
     4621 cggatgccgg gcccttcggc ggttatttgt tatcggcaca caccgttact tcaggatcca
     4681 gcgagatata tcttgatgag caagggcaac agtcgatcac acccggtgcc cccgtttcat
     4741 ttgacagcac ggtagatatc aaagaccagt tgcataccgg aaacttcggc atcactggtg
     4801 atctcggatt atcgtttgat tttggaagta atcgtctgtt cattgaaggt ggcggcaact
     4861 atggatttgt cgcgattcag aacgacccgg ctaatggaaa aaatcatacc ggcgctgcaa
     4921 cgctaagaat aggctacgcg tttaattttt agaaattggt ttgaccttct cattttttag
     4981 tttcgtaaat acttgttggc acaagctcgt ttggtttttg tttcaccagg gtgatgcatt
     5041 ggccgaagag tgcgaaactc cttaacttta tttctgccat ctgctcatca acatttgcca
     5101 tatgaattat atttcaaaaa atcgttggtt cttcatccta ccggttcttt ttgcgacatt
     5161 gatgtttctc gcctgtagaa aaatgattgc ttctgctact aggagcccga atacttcttc
     5221 ggcaaccgtt gcgggtgacg taactttttg gttaacgaag ggcgaccagt ctgttttgtt
     5281 gcaaaaacaa aacgtcaatc ttgtcttcgg gaacgtgtca aaccggtacg caaccataac
     5341 tgttgacaca acacaaaatt ttcagtcgat agatggattt ggttatacgc ttaccggagc
     5401 aagcgcgtac ctcatcaacc acatgagcac agcgagccgg gacgcgttgt taagagaatt
     5461 atttgctggc gattctaatt cggtcagtgt aagttatctg cgtgtgagtg tgggagcgtc
     5521 tgatcttagc ttgaatgttt tctcgtatga tgatatgcca caagggcaaa cggatgtaag
     5581 cctccaaaac ttcagccttg cgcccgacca gacagacgtg atcccggttt tgaaattgat
     5641 actcgcgatc aatccaaaca taaagatctt gggaacgcca tggtcgcctc ctgtctggat
     5701 gaaaactaat gggagctctg ttggtggaag tttgcagcca caatattata atgtgtatgc
     5761 aaattacctg gtcaagtatg tgcagggcat gaaagcgcag ggcatcacga tcgatgcgat
     5821 cacaccgcaa aatgagccgc tcaatccaaa caacaatcca agcatgtata tgacggcaat
     5881 acaggaagat tctttcgttc ggtacaatct cgggcccgtt ttccagtcga acaatatctc
     5941 aacaaaaatt attttgtatg atcacaactg cgatcacccg gaatatccaa catcaatttt
     6001 agacgatgct tcgacccggc cttatgtgga tggctccgcg tttcatttat atgcgggcga
     6061 cataagtgca ttaacaacgg ttcataacgc ttatcccgca aaaaatctgt acttcaccga
     6121 acaatacacc gcatcaaatg gaaattttgg aaatgatctt aagtggcatt tgaaaaatgt
     6181 gatcattgga tcgatgcgca actggagccg caatgcgctt gagtggaact tagcgaacga
     6241 tgcaacgttc agtatgcaca caccaggcgg atgtacaaca tgcaaagggg ctgttactgt
     6301 aagctcaaat acggttacac gaaatgtggc ctattatata gtggcacacg catcgaaatt
     6361 tgttccgttt ggttctatca gaatagcgtc gaatatcagc ggaagtctta acaacgttgc
     6421 attcaaaacg ccttccggta aaaaagtgct gatcgttgaa aacgatggtc attcctccca
     6481 gaattttaat attgctttca acggtaagtc ggtaactacc agtcttcccg ccggcggagt
     6541 aggtacatat gtctggtgag atcgtggatt gatcaatgaa tgagtcaaac gagcagcgtt
     6601 cactcatcac tgattactca tcactcattt cttcgccgcc tgttccaaaa acagataacg
     6661 ttctgaagta ttgtcgcgat gcgcatgcgt atcaacgtca atccgcatta catctacgcc
     6721 cttcgcatta tctacggcgg gccaccaggg tactcccaat ccgtttggat caccggtctt
     6781 tataaaattc acaaagaaag attgcatgat ctctgacacc ttgtagtctt ccgcttgcca
     6841 atcgtaaaca cgattcgttg gcaaattgcc cagcgcatat tcgatctccg ccgaatgaac
     6901 tgcgccgcgt ggaagaggca tcgcaggcgc tttagctttt gaagacgtat cttttgtaac
     6961 tccacccgcc agccctgcag tggcgttgcc catttcagca cgcattcccg gccgtggacg
     7021 cgcatacaag taacggtata caggtttgcc tcctgtgcga ctgtgcacgt cgctccattt
     7081 ccatgtgctg tacccaataa atctgtcgcc ggaaagcgca gtggcgacct gctccacatc
     7141 tgcatctgtt gatgcgttat aaacttttaa tgcgtcggcc gatttatcgc cgtataactt
     7201 ttgtacggct ttcgtatagt tcgcgacggt aggactatct ttccccataa ccatccgata
     7261 ggtcatttcc tcagagttcc agccgaccag caaaggcaca tgcgcctgct cacctttttg
     7321 aaaaatttca gtgggcgact ttggaaagaa atatccgtcc actgccacag gaaaagttcc
     7381 aaaagctgcg cttgccgttg ctttcaatac gtcatctgcg gacattgacc gaagatctgc
     7441 aatagaattt ttttgaatcc cctgcgccca tttactgcct gcgttttccg catcgtttaa
     7501 cgacgcagtc ggcattaatc cgagtaatga accgctttcc ccgatcgcac ctgcgataat
     7561 atttctcgac aagggagaag ccatttgtgc gcttaccgaa aacgatccgg ccgactcgcc
     7621 ggcgatagtt atttttttcg ggtcgccgcc gaatgcagaa atgttttgtt gcacccattt
     7681 tattgcggca ctttgatcaa gtaatccgta attgcccgac gcatgatgcg gagattcttt
     7741 tgtcaattca ggatgcgcaa aaaatccaaa aacgccaagc cggtagttca ccgttatcgc
     7801 aacgataccg tgtcgcgcca tgctttcccc atcatatctt ggctctgatc catcgcctgc
     7861 caggaaaccg ccgccgtaaa aatatacaag cacaggaagg tgctcgtttc cgctttttgc
     7921 aggcgtccac acattcagat acaggcagtc ttcgctcatg ccatttgaac gaaaattcat
     7981 atcaccaaat acattcaatt gcatagccct tggtccgaac ttgtccgcct ttcgcacgcc
     8041 agtccaattc ttaaccggct gtggctctct ccacctgaac tcaccaacgg gcggggctgc
     8101 aaacggaaca cctctgaaaa cgcgaatacc tgattcattt gttccctcaa gtatgccgtt
     8161 caccgttttt acctgtggcg cattctcacc agtcagttga gaaaaaactg ctgacgttag
     8221 caaaagaaaa gcaacaagag atgatagttt tttcatacgt gcaatttttc aaaatgaatt
     8281 aaaagaggat agtcgaagat aagaactgaa aaaaaaggca cgaatttatt tttcgctggc
     8341 cgcaaaattc gggacatgtt cctcctggta acgtgatcag cgtaattgaa cgcggtgcat
     8401 gtagccgatc agccgcacaa gcgctcggat gaattgttca ttaagttgaa agcgcacaga
     8461 gagtttatct cattcattac cacaaacccg acatcaagag ttaggtgaga tcccgaatag
     8521 tgaagttgtt taattggtcg tgccttacaa taagagttta ggttttcacc catgcgacga
     8581 tccgaagggg acctccgctc ccattcttaa ttttcatggg aagggcaatg atatacgtgc
     8641 ctctcacagg aagcaaattc atatttgcaa cattttcaaa acccggaatg gatgcaccca
     8701 gcaggatttg atgtgttttg aaattttttg attgtccata atccatgctc ggcgtgtcaa
     8761 taccaactgc ttttatctta tgctgaacga gccagctcgc ggtcgttgaa tcgatcccgg
     8821 ggaaatgcag ttttggaaca gctcctgcgc ctgtttccga tgtgccgaaa tatttttccc
     8881 tgttcggata aaattggccg tagcccgttt tgaaaagcac gattgtgttt tccgaaattt
     8941 ttccgttttt gctttcccag tcggcgatat catttaccga gatgaggtaa tcacgatcgt
     9001 tgagcgcttt tgcggaaacg tctatcacca ccgcatcgcc cgttaatttt tcaagaggta
     9061 atttatcaat tgttaatcca tgttcggaga aatgtattgg agcatccaaa tgtgttcccc
     9121 cgtgttccgg cgcgctgaat gcataagtgg aataataaaa acctgcaggc gacatgcctt
     9181 caaagatggt atccagttta aagccggttg gattgttcgg ccaatacaaa gtttcggaag
     9241 acaggtcata actcagatcg atccacttcc cttttgagag aacctgtgaa aggtcctggc
     9301 cttttacatt cgttgcagcg atgaaaatta cagaaagaaa aatggacaca cttgtaacga
     9361 tcgatttcat agcagaaaat tttgaaaaag ataagaaata ttgtgaatta ggaattgga
//
LOCUS       DASQJI010000606         5296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_232404,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000606 DASQJI010000000
VERSION     DASQJI010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232404"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VEV83_16520"
     CDS             <1..273
                     /locus_tag="VEV83_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HYK46785.1"
                     /translation="NEFNPELDKAGRVADFIELGELMCIDALQRNESCGGHFREEYQT
                     PEGEALRNDEEFMYVSAWELKGDGNWEIHKEDLKYDVVKPSQRSYK"
     gene            377..793
                     /locus_tag="VEV83_16525"
     CDS             377..793
                     /locus_tag="VEV83_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK46786.1"
                     /translation="MRNDKDNLIVNKTVEFSLTIINYCEGLEKNKKFVIAKQLLRSAT
                     SIGANVYEAQNAESKADFIHKMKIAAKEASESLYWLILCERTESYEYDMKFKNDLNDI
                     IRILSKIISSAKGKIPGFAWTLLYAFSNFQIFKLPH"
     gene            815..1564
                     /locus_tag="VEV83_16530"
     CDS             815..1564
                     /locus_tag="VEV83_16530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HYK46787.1"
                     /translation="MNLTLKVWRQRNSKEKGRFETYKVEGISSEMSFLEMFDVLNERL
                     IAEGKEPIAFDHDCREGICGTCSMYVDGKPHGPWQANTVCQLHMRAYKNGDTIVVEPW
                     RAKAFPVIKDLVVDRSAFDRIIQAGGYISVNTGNAVDANAIPIEKNNADKSFAAAACI
                     GCGACVAACKNSSAMLFVSAKVAHLALLPQGEPERKTRVVSMIHQMDKEGFGACTFTE
                     ACEAACPKEISVTNIARLNQEYLTATLTAEK"
     gene            complement(1620..2072)
                     /locus_tag="VEV83_16535"
     CDS             complement(1620..2072)
                     /locus_tag="VEV83_16535"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYK46788.1"
                     /translation="MRTAKDILQHKGPQFNFIRPEATVLEAITIMKSENISYLIVRDN
                     ENRYLGIISERDYTHKVILANKHSDSTQVKDIMTIGLPMAQPDDTTSYCMLLMNNSKE
                     RYLPVFDKNDFVGIITIHDLMREAMTDYEKGKADLASHEKEFLATHGR"
     gene            2250..2738
                     /locus_tag="VEV83_16540"
     CDS             2250..2738
                     /locus_tag="VEV83_16540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK46789.1"
                     /translation="MSYTVPSGTRIGHVHLKVSDLDKALHFYQELLGFQITARLGAQA
                     VFLAADDYHHHIGLNTWHSKNAAPAPVNSAGLYHTAILYPTRKELATVFKRLLDAKYP
                     FTGFADHGVSEALYLNDPDQNGVELYWDKPRDQWPVDQEGNIEMYTEHLDLDSLLSEL
                     NT"
     gene            2795..3463
                     /locus_tag="VEV83_16545"
     CDS             2795..3463
                     /locus_tag="VEV83_16545"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HYK46790.1"
                     /translation="MKVCTDACLFAAWVAQGPQLAARSIMDIGAGTGLLSLMYAQKKP
                     AAIIDAVEIDEAASKQAKENFDASPWNDRLNTYNLSIQQFTSTTTKRYDVIFSNPPFY
                     ENELETEDQKRNVALHSSALSFEDLLSAVDQLLANDGSFFVLLPYHRTKVFEELAAKK
                     NLFVKEKILVKQTSEHNYFRCMLCLTRKPAAAINQTDITIMGSDNKYTRAFVQLLKDY
                     YLYL"
     gene            complement(3763..>5296)
                     /locus_tag="VEV83_16550"
     CDS             complement(3763..>5296)
                     /locus_tag="VEV83_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HYK46791.1"
                     /translation="HPDAGKTTLTEKFLLFGGAIQTAGAVKSNKIKKHATSDFMEIER
                     QRGISVATSVMTFEYKGMLINLLDTPGHKDFAEDTYRTLTAVDSVVLVVDSVNGVEEQ
                     TRRLMEVCRMRSTPVIVFINKLDRDGKNRFDLLEEIEKELKIQLHPMTWPINSGKDFK
                     GVYNLDAKSLLLFTANTKATDEDIVIRDLHAADLVDLLGEKDAEHLREDVHLIDGVYG
                     KLNDNDYLSGRTAPVFFGSAINNFGVKELLDTFIKIAPKPQDRETTKRIIDVDEDKLS
                     GFVFKIHANLDPRHRDRIAFMRVCSGKFERNTYYHHVRLNKDFRFSNPYSFMARSKEI
                     IEDAYPGDVVGLFDTGNFKIGDTLTEGEDFYFIGIPSFSPEIFKELVNKDPMKTKQLE
                     KGITQLTDEGVAQLFTQFGGTKKIIGCVGELQFEVIQYRLLHEYGAACEFKVLPFYKA
                     CWLTSTDAKKLEDFLRFKQQNSAEDKDGHPVYLAQSEWFLNTEIRNNPDIEFHFTSEI
                     HK"
BASE COUNT         1501 a         1159 c         1147 g         1489 t
ORIGIN      
        1 aacgaattca atccggagtt agataaagca ggacgcgtgg cagattttat tgagttgggt
       61 gaactgatgt gcatcgatgc gctgcagcgc aatgaaagtt gcggcggaca cttcagggaa
      121 gagtatcaaa cacccgaagg cgaagcgttg cgcaacgatg aagagtttat gtatgtatct
      181 gcatgggaac tcaagggcga cggcaactgg gaaatacata aagaagactt gaagtacgat
      241 gtggtgaagc cgagccagag gagttataaa taatttgaaa atttgaaagt gggttaattt
      301 gaaaatgcac tcaccagaag gtttgataat tttgaaaaaa aaacttcttt acccctaaaa
      361 cctaaaaaac ttttttatga gaaacgacaa agacaattta attgtcaata aaacggttga
      421 attttcatta accattatta attattgtga aggtcttgaa aaaaacaaaa agttcgtaat
      481 tgcaaagcag cttttacgat ctgctacatc aatcggtgcg aatgtttatg aagctcaaaa
      541 cgcggaaagc aaggcagatt ttattcacaa gatgaaaatc gcggcgaagg aagcaagcga
      601 aagtttatat tggttgatct tatgcgaacg aaccgagagt tatgaatatg acatgaagtt
      661 taaaaatgat ttgaacgaca tcattagaat tttatctaaa ataatttcgt ccgccaaagg
      721 aaagatcccc ggctttgcct ggacgttgct ttacgcattt tcaaattttc aaattttcaa
      781 attgccacat tagccatata tggaacatta cacaatgaat cttacgttaa aggtttggcg
      841 gcagcgaaat agtaaagaaa aaggccgttt tgaaacatat aaggttgaag gcatttcttc
      901 cgagatgtcg ttcctggaaa tgtttgatgt gctgaatgaa cgtctcatcg cagaaggcaa
      961 ggagccgatc gcgtttgatc atgactgccg cgaggggatt tgtggtacgt gttctatgta
     1021 tgtcgacggc aagcctcatg gcccatggca ggcaaatacg gtttgccagt tgcatatgag
     1081 agcctataag aacggcgata ctattgtggt tgaaccgtgg cgcgcaaaag catttccggt
     1141 aattaaggac ctggtagttg accgatccgc gttcgacaga ataatccagg ctggcggata
     1201 tatctccgta aacacaggta atgctgttga tgcaaatgca attccgatcg aaaagaataa
     1261 tgcggacaaa tctttcgccg cagctgcgtg cataggttgt ggtgcttgcg ttgcggcctg
     1321 caaaaacagt tcagcgatgt tgttcgtttc tgcaaaagtt gctcacctgg ctttgttgcc
     1381 gcaaggcgaa cctgaacgca aaacacgcgt cgtttcgatg atccatcaaa tggataagga
     1441 aggttttggt gcgtgcacct ttactgaagc gtgtgaagcc gcgtgcccga aagaaatttc
     1501 ggtgaccaat atcgcacgcc tgaaccagga atatttaacg gcaacgttaa cggcagaaaa
     1561 gtaacacgag aatcctaaat cctaattcct aaatcccaat tcctaattcc accttccgtt
     1621 taccttccat gcgtcgccaa aaattctttc tcatgcgatg caagatctgc cttacctttt
     1681 tcataatcgg tcatcgcctc gcgcatcaga tcgtggatgg taatgatgcc aacgaaatcg
     1741 tttttatcaa ataccggcag gtatctttct tttgaattat tcatcagcag catgcaataa
     1801 ctggtcgtgt catcgggctg agccatcggc aagccgatcg tcatgatgtc cttaacctgc
     1861 gtactgtcgg aatgcttgtt cgctaagatc accttgtgtg tgtaatctct ttccgagatg
     1921 atgcccaggt acctgttttc attatccctg acgatcaggt agctgatatt ttcgcttttc
     1981 atgatcgtga tcgcttcgag cacggttgct tccgggcgta taaaattgaa ctgcgggccc
     2041 ttgtgttgta atatatcttt tgcagtacgc atatagtaat ttaaagaggc aaatttaagt
     2101 ttgcaacagg caatctaacg ctaccttcat taaaaaatga aattgttgcc attttcgccg
     2161 gttaacgtca ttgtaaatta ccggtggcag aacaacacaa ataggttagg tcaaataaat
     2221 ttcattgtcg acttttatca gaatttatta tgagctatac agtcccttcc ggtacgcgga
     2281 ttggtcacgt gcatttaaag gtgagcgatc ttgataaggc attgcatttc taccaggagc
     2341 ttcttggctt tcaaattaca gcaagattgg gggcgcaggc ggtgttctta gctgccgatg
     2401 attatcacca ccacatcgga ctgaatacat ggcacagcaa aaacgccgca ccggcgccgg
     2461 taaattccgc aggattatat cacacagcca tcctctatcc gacgcgaaaa gaattagcaa
     2521 ctgtttttaa gaggttactt gatgcgaagt atcctttcac cggttttgct gatcacggtg
     2581 tttcggaggc tttgtattta aatgacccgg accaaaatgg cgttgaatta tattgggata
     2641 aacctaggga ccagtggccg gttgatcaag aaggaaacat cgaaatgtac acggagcatt
     2701 tggatttgga ttctctgctg agtgaattga acacgtaatg ccaaacccgt atttccgctt
     2761 caaaaaattt acgattcaac aggataaatg tgcaatgaag gtttgcacag acgcatgcct
     2821 gttcgcagcg tgggtggctc aaggcccaca gctcgcagct cgcagcatta tggacattgg
     2881 agctggaacc gggttgcttt cgttgatgta tgctcaaaaa aaacccgctg caataattga
     2941 cgcagtcgaa attgacgaag cagcgtcgaa gcaggcgaaa gaaaatttcg atgcttcccc
     3001 atggaatgac cggttaaaca cttacaattt atccatccag caattcacat caacgactac
     3061 aaaaagatat gatgttattt tttccaatcc tccgttttat gaaaacgaac tggagactga
     3121 agatcaaaaa cgcaacgtcg cattgcacag ctcagcgttg agttttgaag acctgctatc
     3181 agcggttgat caattgcttg cgaatgatgg cagctttttc gtgttacttc catatcaccg
     3241 aacgaaagtt tttgaagaat tggcggctaa aaaaaatctt tttgtaaaag aaaagatttt
     3301 ggtaaagcaa acatcggagc ataattattt caggtgcatg ttgtgcttaa ctaggaaacc
     3361 cgctgcagcc ataaaccaaa cggacataac cattatgggg agcgacaata agtacacgcg
     3421 tgcatttgtg caattgctca aggattatta tctgtatctc taaaacaaga tatgctgaaa
     3481 tttctcctta cttcgaaatg acgaagctcc attttgtcga aacgggaaca tgccgtcatt
     3541 tcgaaggagc ggaatgagca cgcctttttt gcatttacat tccgcgactg agcaatctca
     3601 acgaatatta gcgcagttct tcagttaaca gcaaccggca acagtacgtt gagatttctc
     3661 cttgcgtcga aatgacgaga cgtttgaata aaaccagata cgatcctctg caagataata
     3721 ggccagactt caagcctcaa acttcaaacc tcaaacttca aactatttat gaatctcact
     3781 cgtaaaatga aactcaatgt caggattgtt tcttatttcg gtgtttaaga accactcgct
     3841 ttgtgcgagg taaacagggt gcccatcttt atcctcggct gaattttgtt gtttgaaccg
     3901 tagaaaatct tcaagctttt tcgcatccgt gctggtaagc cagcaagctt tataaaatgg
     3961 aagcactttg aattcacatg cagctccata ttcatgcaat agcctgtact gaattacttc
     4021 aaattgcaac tctcctacac agcctattat cttttttgtt ccgccaaatt gcgtgaatag
     4081 ttgcgcgacc ccttcgtcgg tgagctgcgt aattcctttt tcaagttgct tcgtcttcat
     4141 cggatccttg ttcaccaatt ctttaaatat ctccggtgaa aaagatggaa ttccaataaa
     4201 ataaaaatct tcgccttcag tgagtgtatc tccgatttta aaattaccgg tgtcaaacaa
     4261 accgaccaca tcgcccgggt acgcatcttc aataatctcc ttgctgcgcg ccataaaact
     4321 gtacgggtta ctgaatcgaa agtctttatt gaggcgcacg tgatgataat atgtgttgcg
     4381 ctcgaactta ccactgcaca cgcgcataaa tgcgatccgg tcgcggtgac gcgggtcgag
     4441 gttggcgtgt atcttaaaaa cgaagccgct cagtttatct tcatccacat caataatgcg
     4501 cttcgtagtt tcccggtcct gcggcttcgg agcgatttta ataaacgtat caagcaattc
     4561 ttttactcca aaattgttga tcgcgcttcc aaaaaatacg ggcgcagttc tgccggacaa
     4621 ataatcgttg tcgttcaatt ttccatacac tccgtcgatc aagtgcacat cttcccgcag
     4681 gtgttctgcg tctttttctc ccagcaaatc gacgagatcg gcagcatgca gatctctgat
     4741 tacgatgtct tcatccgtcg cttttgtatt cgccgtgaaa agcagtaaac tttttgcatc
     4801 caggttgtac acgcctttaa aatctttgcc gctgttgatc ggccatgtca ttggatgaag
     4861 ctggatcttc aattcctttt caatttcttc caggaggtca aatcggtttt ttccatcacg
     4921 gtccagttta ttgatgaaaa caattacagg cgtgctgcgc atcctgcata cttccatcaa
     4981 cctccgcgtt tgttcctcaa caccattcac gctgtcaaca acgagcacga cgctgtcaac
     5041 ggccgtcagc gtacgatacg tgtcttccgc gaaatcctta tggcccggtg tatcgagcag
     5101 gtttatcaac atgcctttat attcaaacgt catcacgctt gtggccacag aaataccacg
     5161 ctgcctttcg atctccataa aatcgctggt agcgtgtttc tttatcttgt tgctcttaac
     5221 agcacccgca gtttgaatcg ctcctccaaa caaaagaaac ttctcggtaa gcgtcgtctt
     5281 gccggcatcg gggtgc
//
LOCUS       DASQJI010000607         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1305037,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000607 DASQJI010000000
VERSION     DASQJI010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305037"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1212)
                     /locus_tag="VEV83_16555"
     CDS             complement(<1..1212)
                     /locus_tag="VEV83_16555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46792.1"
                     /translation="MKMLKAIPYRYRILAILCSLTTLTYLDRICISIVGVRVKADLHL
                     NNEQFGWVLASFALAYALFEIPSGALGDRIGPRAVFIRIVLVWSLFTAITGLVTGLIS
                     LLIVRFLFGIGESGTYPNALVAVSRWFPANETGRALIGIGLGQQIGSAIAPLIITPLA
                     ISYGWRAPFFVNAAIGVVWVAVCVLWFKNFPSEMKNISPAEIQKIESGCRHKKQHGLI
                     PFKLIFQSRTLWSLMFMYFCLQWANYFFVAWMPVYLQEGRHMSETDAKPVIFFLFIAG
                     IVGLLAGGFATDWLVKKKGLRFGRRSIAMTGIGMCGLLILTTAIVSRTNIAVVTLVTA
                     NGFYGFCVMSCFGVCSDIARNNAGTVTGAMNFFGQTGAFFLAIVFGKIAQVTNNLNYP
                     LFVVAGVLLVSF"
     gene            complement(1384..>1613)
                     /locus_tag="VEV83_16560"
     CDS             complement(1384..>1613)
                     /locus_tag="VEV83_16560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46793.1"
                     /translation="LQREFYSPQYATTEQKEIRVPDYRNVLYWAPQITTQQGRQVSFY
                     TSDVKGKYIAVIQGIGINGKAGYATTEFEVK"
BASE COUNT          482 a          383 c          350 g          398 t
ORIGIN      
        1 aaagctcacg agcaacacac cagccactac gaacagcgga taatttagat tattcgttac
       61 ttgcgcaatt tttccaaaaa caattgcgag aaaaaatgca cctgtttgcc cgaaaaaatt
      121 cattgcacca gttacggtgc ctgcgttatt tcgtgcaata tctgaacaaa caccaaagca
      181 cgacattaca caaaatccat aaaacccgtt tgcggttacc agggttacga cagcgatatt
      241 agttcgcgat acgatcgctg tcgtgaggat gagtaagcca cacatgccga tgccggtcat
      301 tgctatcgag cgtcttccaa aacgcaaacc ttttttcttc accagccagt cggtagcaaa
      361 tccgcctgca agcaaaccaa cgatgccagc aatgaacaaa aaaaagatta ccggctttgc
      421 atccgtctcc gacatgtgcc ttccttcctg caaatacact ggcatccacg caacaaaaaa
      481 atagttcgcc cattgcaagc agaaatacat gaacattaat gaccaaagtg tacggctttg
      541 aaaaattaat ttgaatggga tgagcccatg ctgctttttg tggcggcagc ctgattctat
      601 tttttgtatt tcagccggag agatattttt catctccgac ggaaaatttt tgaaccatag
      661 aacacatact gccacccaaa ctacgccgat cgctgcattc acaaaaaatg gcgcacgcca
      721 tccataagaa atagcaagcg gggtaataat aagcggagca atagccgagc ctatctgctg
      781 accaagtcct attccgatca atgcgcggcc tgtttcattt gcagggaacc acctggaaac
      841 cgccaccagc gcattcgggt atgtgcctga ttctccaata ccgaataaaa agcgaacgat
      901 gagtaacgaa atgaggcccg tcactaatcc cgtaatagct gtgaatagcg accatactaa
      961 cacaatgcgg ataaagacag cccgcggccc aatgcgatcg cctaatgcgc cggacggaat
     1021 ttcgaaaagc gcatacgcca atgcaaatga tgcgagcacc caaccgaatt gctcgttgtt
     1081 gagatgaagg tcagctttta ctcttactcc aacgatagag atacaaatgc ggtcgaggta
     1141 tgtgagcgtc gtgagcgaac acaatatggc aagaatgcga taacgatatg gaatggcctt
     1201 gagcattttc attactgcaa tcgcgaacag aatttgagtt cttcttaaag gaaagatagt
     1261 taagatttgt cgaggtatta aaagaagaga cttttgtctt tcaagacgag gcagttgaat
     1321 gtgatagcgc gcatcatccg caatgagcgt tttgttgtcg gaagagatcc ggcgtgcaga
     1381 aacttacttt acctcaaact ctgttgtggc gtaaccagct ttgccgttaa tgccgatgcc
     1441 ctgtatgacg gcgatatatt tgcccttcac atccgaagta taaaaagata cttgcctgcc
     1501 ctgttgcgtt gttatttgcg gtgcccagta taagacgttc ctataatcag ggacgcggat
     1561 ttccttttgt tcagttgttg catattgcgg agaataaaac tcccgctgaa gtt
//
LOCUS       DASQJI010000608        14615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_691592,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000608 DASQJI010000000
VERSION     DASQJI010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14615
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691592"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VEV83_16565"
     CDS             <1..180
                     /locus_tag="VEV83_16565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46794.1"
                     /translation="SAQIIITDNSGKVLKQVNVSGSGKGSVQINAATLSAGAYQYSLL
                     VDGKLIDTKQMELLR"
     gene            229..2166
                     /locus_tag="VEV83_16570"
     CDS             229..2166
                     /locus_tag="VEV83_16570"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HYK46795.1"
                     /translation="MKKIVTSVILSMLIVFTAHAQIWLNWQRFTDGTAHLDDSAAAVV
                     IDEAGPNVYVGGNIYNSGSGSDIVIRNYDLNGNLVWKTGYASALNDHINQVQCNGDFS
                     EVYGAGNTDNGSYLIALLINMDMNGNLLWSRTYSGSFAGDTKFLNLKVAPNGNIIVVG
                     ETQTALSVYKGIIASYDSSGKLLWKKTTANTSGESQFNHLEIDGIGNIYTSGFIYNGT
                     NRDGYVAEYNKNGKLINSVAINGAGNKDDEVTGLELMNGLLYTTPVGRGTGSFDEATI
                     TAYNPADFSVAWSKNYSSVNGDVHIIGPDCPEITGDIMVAGTQDNLTTQASDYLILSY
                     NAITGDLNWAKTVSRDSGYNNLATAMGVDASGNLLITGSSTLAGAADVFTVAFDAAGN
                     LVWSKVFNGVVNGDDYPTAIGADASGNIFVAGTSAQQISSALLPQGKYNLDFTLLKYS
                     AKFICSVPTNLYSDSISSSFAWLHWDAMPEALKYKLQYRIVGGTWTSINVTGNNKIVT
                     GLTAKTKYQWRVKTICSLSPALSSDYSVTKSFITLGAAFSNVSTNKNSEAIAGNQTGL
                     KLFPNPATKMVSLRLNGINETSMQLKICDLSGKELKQYRFIAVDKTFDQQIDVSALPP
                     GSYLVIVSGSKQKWTQILVKQ"
     gene            2185..2652
                     /locus_tag="VEV83_16575"
     CDS             2185..2652
                     /locus_tag="VEV83_16575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46796.1"
                     /translation="MKKILLATGLFVGAHINVTAQFSQGAKDSARMEIQQLTNDWNEV
                     IIHPDSVKLDKILAPEYSLNGLVNRGIWMANTLHHLTTDSLEILGALNITFYGQAAKS
                     EGVLYWKAAYAPGAIHSGPSTINAEFLVTDIWIKRDGHWQVLIRMSLPSKMRQ"
     gene            2724..3185
                     /locus_tag="VEV83_16580"
     CDS             2724..3185
                     /locus_tag="VEV83_16580"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK46797.1"
                     /translation="MKPLLFLVLTMLYLNAFSQQSISVQPIKPDESIQQALLQKTQRF
                     TEAWGKSDTGTLSKLLAAEYRHSDIWGKIQHKEDWLAYAAAPRKISDIVSSDVEILLY
                     NNNTAVITGKMSYLFGEEKIMQEIRFTQLWTISEAEWKRTAFQATLIDKSK"
     gene            3344..4138
                     /locus_tag="VEV83_16585"
     CDS             3344..4138
                     /locus_tag="VEV83_16585"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK46798.1"
                     /translation="MDSLNCAEENSEPQIILKAIIIDDEARSRKALQIALNDYCPSIQ
                     IAVIAETAESGIEAIIKHKPDIVFLDVQMPGMSGFDLLAHFPEINFDVVFITAHDHYA
                     IKAIRFSALDYLLKPIQIDELMAAVKKAEEKKNYRHINWQYKSLYENVRSGHNASGSV
                     AVPTGDGLLLIKTQQIIRCEAEGNYVLIFQEGREKMLITKTLGDIESMLNPKEFFRVH
                     NSHIVNLSHIKKYVKGDGGYVIMSDNSTVDVSRRKKEEFLQMLSSR"
     gene            complement(4199..4837)
                     /locus_tag="VEV83_16590"
     CDS             complement(4199..4837)
                     /locus_tag="VEV83_16590"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYK46799.1"
                     /translation="MSITVIIVIITAIISFMAFSNQELLNKLIFYPPAISREKQWYRF
                     FSNGLIHADIGHLAFNMISLYMFGGLVEDAFLQIFGDSGKLLYLVMYISALAVCLIPT
                     YMSHKDDHYYRSLGASGAVSAVVFAGVFLFPEQKIGLFFIPPIIPGFIFGPLYLVLTA
                     YLAKRGGGGINHSAHLWGALYGIAFLILMCVALRTDFNPIDNFVQSVKAYFQ"
     gene            complement(4866..5339)
                     /locus_tag="VEV83_16595"
     CDS             complement(4866..5339)
                     /locus_tag="VEV83_16595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HYK46800.1"
                     /translation="MKLQFWSIGKSHDDYVKKGIEDFSKRINNYFPVEWLLVPSPKNA
                     SSLPGSDLKKQEAKAILKKLNKEDFLVLLDESGTLLSSVEFAELIRRHLSGNTRSLIF
                     LIGGAFGVSEEIKRRANFTWSLSKLVFPHMLVRLILAEQVYRACSILRNEKYHHT"
     gene            5413..6312
                     /locus_tag="VEV83_16600"
     CDS             5413..6312
                     /locus_tag="VEV83_16600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 family protein"
                     /protein_id="HYK46801.1"
                     /translation="MKLPHLYYCLFLLLLSSCEREINLEVQNQAPKLVVDASIENNSA
                     PVVVLSSSLNYFGTISPEELSASFVHDAAVTITDGFKSVNLVEYAYRDSSGFDLYYYT
                     VDYTDPQHVLLGELNRSYMLTIKLSDSSVYTSTTTIPLLKKTCDSLWWTPAPNNPDPS
                     RCVLFGRFHDPPGLGDYVRYFTKVNNEPFYPGYTSAFDDQVVDGTTYTFQIPRGFNKN
                     DTAQVSNNEDFGFFHRGDMITFKFCNIDKATFDFWRTWEFAFQSNGNPFSSPVKVIGN
                     VSNNALGAFCGYAAQYLTIQIPF"
     gene            6470..7417
                     /gene="trxB"
                     /locus_tag="VEV83_16605"
     CDS             6470..7417
                     /gene="trxB"
                     /locus_tag="VEV83_16605"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HYK46802.1"
                     /translation="MDKIQKTHCLIIGSGPAGYTAAIYAARANMKPLLYQGIQPGGQL
                     TITTEVENYPGYANGVQGPEMMIDFEKQAARMGAKICYGLATKVDFTGPVHKVWIDEE
                     KLVEADSVIIATGASAKWLNLESEQRLNGYGVSACAVCDGFFFRNKEVAIVGAGDTAC
                     EEALYLSKLCSHVHMIVRKDEHGMRASKVMQDRVRNTPNIKIYWNTETVEVLGEHRVE
                     GVKVRNNKSNEEQTIPVSAFFVAIGHEPNSAIFKGWIDMDEAGYIKTMPGSARTNVDG
                     VFAAGDVQDKIYRQAVTAAGSGCMAALDAERYLGAKEGA"
     gene            complement(7573..8142)
                     /gene="infC"
                     /locus_tag="VEV83_16610"
     CDS             complement(7573..8142)
                     /gene="infC"
                     /locus_tag="VEV83_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HYK46803.1"
                     /translation="MALPQRGRFNPRFIRQPEPEHRINERIRVPQVRLVGENVNVGVY
                     PTQEALRIAQQQELDLVEISPNADPPVCKVIDYKKFLYEKKRKEKEMKANAKQSEVKE
                     IRFTPGTDDHDFDFKTKHAEKFLKEGNKVKAYVQFKGRAIMFKERGELLLLKFAERLG
                     EVGVLEGLPKMEGKRMLAIFAPKGAKKKA"
     gene            complement(8206..10134)
                     /gene="thrS"
                     /locus_tag="VEV83_16615"
     CDS             complement(8206..10134)
                     /gene="thrS"
                     /locus_tag="VEV83_16615"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HYK46804.1"
                     /translation="MINITFPDGAVRQYENGVTALDIAKSISEGLARKVLAAKVNGEV
                     RDSMRPIYEDAEVKLLTWNDAEGKSTFWHSSAHLMAEAVESLFPGVKFWVGPPVENGF
                     YYDVDLGDRKMSEEDLRELEKKMNELAKQNNAYIRKEIPKAEAVSYFTEKGDEYKLDL
                     LQGLQDGKISFYTQGNFTDLCRGPHIPNTGFIKAIKLTSLAGAYWKGDEKNKMLTRIY
                     GVSFPNQKELDEYLAMLEEAKKRDHRKLGKELGIFTMDDDVGPGLALWLPNGATIIEE
                     LEKLAKETEEDGGYKRVVTPHIAKENLYLTSGHLPYYADSMYPPMELEGVKYYLRAMN
                     CPHHHKVFAAEPRSYRELPLRLAEYGTVYRYEQSGELFGLMRVRCLHMNDAHIYCTKE
                     QFNDEFRAVSDMYLKYFKIFGIDKYVMRLSLHSPDKLGVKYVNEPELWKETEAMVREV
                     MTEANIPFVEVNDEAAFYGPKIDVQIWSAIGREFTLATNQVDFAQGRSFKLEYTTPDN
                     KAETPLIIHRAPLGTHERFIGFLLEHYAGRFPLWLSPVQVKILPISDKFLPYSKEVFT
                     QLKKSRIRVEVDERSEKIGKKIREAEIAKVPYMLVIGERETTERKLAVRKHGTADGGS
                     KTIEELINMLSEEIQNRN"
     gene            10304..11632
                     /locus_tag="VEV83_16620"
     CDS             10304..11632
                     /locus_tag="VEV83_16620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46805.1"
                     /translation="MKQRMVLAAFLLISCNIFGQDLTGIWRGYFYASVGPYKEYYKYE
                     VQIDQLKNYSLEGVTYSYRTTVFYGKATFEGIWFPKTQSILLKELKLVELKIQGNSEA
                     CAMTCTLDYGKDGKTETLTGTFTSVNTDSRRDCGSGTVYLEKVTESDFQKEDFLLKKS
                     TPTAPPVTNNSPNNNTTNNNAKPKVSAPAVNDVSKANAKKLQAALGVPADGVVGPKTM
                     AELKRKVPGFTDKLDLNNTAQVNKVIDQVKKSNVTVAKKPQPNTTAQTKTQPKAPPST
                     PAKTQQKTQPPVVSKKDTIAKTTITPPSATQTEIKELPAKKPVPVPEVIKTRSNPLVK
                     TIITTMPDIKIELYDNGEIDGDTITVYHNNEVIAWKKGLTDKPIVLNLHADANNTMHE
                     FVMVADNLGAIAPNTALMIISTGGKRYQLFISSDKQKNAKVVIQYNPATQ"
     gene            11692..12477
                     /locus_tag="VEV83_16625"
     CDS             11692..12477
                     /locus_tag="VEV83_16625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK46806.1"
                     /translation="MNLSLVDKYAIVCGSTQGIGLAIAEELALLGANCTLLARNEEKL
                     KEALLHLDISLRQQHNFLVADFSKPVEVKKIILAHVQNNPVHILVNNTGGPPAGAIVD
                     AAEQNFLDAFNQHLICNHILAEAVIPSMKANAYGRIINIISTSVRIPLKNLGVSNTIR
                     GAVASWAKTMANELGQYNITVNNILPGSTKTQRLGSLIKTTAEKTKKTVEQVEKQMQE
                     EIPMKRFGDVSELAAVAAFLASPAASYINGVSIPVDGGRTGCI"
     gene            12743..14125
                     /locus_tag="VEV83_16630"
     CDS             12743..14125
                     /locus_tag="VEV83_16630"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HYK46807.1"
                     /translation="MECIDPATSEVFAHVPDSDEKDIELAVQFALEAFEKWSVTPVEK
                     RFQILNRIADLIDENLDALALAETNDTGKPLWLSKSVDIPRASANFRFFATGIMHFAS
                     ESHQMEDKAINYTLRQPIGIVGCISPWNLPLYLFTWKIAPALAAGNCVIAKPSEVTPV
                     TAFLLSRICNEAGLPAGVLNIVHGTGNRTGEAIVAHPEIKALSFTGSTRAGARIASVA
                     APMFKKLSLELGGKNPNIIFADCNWERMMNETIRSSFSNQGQICLCGSRILVEKNIYE
                     KFKTEFLERTKQLTVGDPLDKKTKQGAIVSKLHFDKVMSCVETAKQEGGKILCGGHSV
                     KVEGRCSNGFFIAPTVIEGLGPSCKTNMEEIFGPVVTLQSFETEEEALRLANATGYGL
                     SATIWTQDISKANRVAAKTQSAIIWVNCWLLRDLRTPFGGMKNSGVGREGGWEALRFF
                     TESKNVCVQL"
     gene            complement(14137..>14615)
                     /locus_tag="VEV83_16635"
     CDS             complement(14137..>14615)
                     /locus_tag="VEV83_16635"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HYK46808.1"
                     /translation="QRQKNYARTLKLPTIYTPQVVVNGVEQFVGSDKVRLRKTIDGDL
                     QLPAQKMLEITAVTKDDKEIYVSYKTNDTGNLNVALVQLKAENKISAGENHGASLHHV
                     NIVRDIKTIPLEANEGKAVVTVPNGLSHHDCMVIAFAQRGNDLKITSAAEAKIDDQ"
BASE COUNT         4214 a         3161 c         3271 g         3969 t
ORIGIN      
        1 tcagcacaaa ttatcatcac tgataattca ggaaaggttt taaagcaggt aaatgtttca
       61 ggcagcggta aaggttctgt gcagataaat gctgcaacac tttcagcggg agcttatcaa
      121 tattcattat tggtggatgg aaaattaatc gacacgaaac agatggagtt gctgcgataa
      181 tattataccg gcctaaacat actttcaaaa aaattaaaaa ttaataaaat gaagaaaata
      241 gttacatcag tcatattatc gatgctgatt gtttttacag cccacgcgca gatctggctt
      301 aactggcaac gtttcacaga cggtacggca catcttgacg attctgcagc tgctgttgtt
      361 attgacgaag caggccccaa cgtttatgtt ggcggcaaca tctataactc agggagcggt
      421 agtgatattg ttattcgaaa ttatgacctc aatggaaacc tggtatggaa aaccggttat
      481 gcctcggcct taaatgacca cattaaccag gtacagtgta atggagattt cagtgaagtt
      541 tacggagcag gtaacacaga taacggttct tatcttatcg ccctgctaat taacatggac
      601 atgaatggaa acctgttgtg gtcgcgaact tatagtggtt catttgcagg cgatacaaaa
      661 ttcctaaatc taaaagttgc gcccaatgga aatattatcg tagtgggcga aacacagacc
      721 gcattatcag tatacaaggg tattattgct tcttacgaca gttctgggaa attactctgg
      781 aaaaagacta ccgcgaatac gtcgggtgaa agccagttca atcacctgga aattgatggc
      841 atagggaata tttatacttc cgggtttatt tacaatggaa caaatagaga tggatacgtg
      901 gccgaatata ataaaaatgg caagctgatt aattcagtcg ctattaatgg tgcaggcaat
      961 aaagatgatg aagtaacggg cctggagctg atgaatggtc tattgtatac cactcccgtt
     1021 ggccgtggca caggatcgtt tgatgaagct acaataactg cttataatcc tgcagacttt
     1081 tccgtggcct ggtcaaaaaa ttatagctcg gtaaatgggg atgtacatat tatagggccc
     1141 gactgtcctg aaataactgg agatataatg gttgccggca cacaggataa ccttacaacg
     1201 caggcttccg attatctgat ccttagctac aatgccatta caggagactt aaactgggcg
     1261 aagactgtaa gcagggattc cggctataat aacttagcca cagccatggg ggttgatgcg
     1321 tcaggaaatt tattgataac aggcagctca actttagcag gcgcagccga tgtatttaca
     1381 gttgcattcg atgctgcggg aaatcttgta tggtcgaaag tttttaatgg cgttgttaat
     1441 ggtgatgatt atccaacagc gattggtgca gatgcaagcg gaaatatttt tgtagcaggc
     1501 acttctgcac agcaaatatc ttcagcgctt ttaccccagg gaaagtataa cctggatttc
     1561 acattattga aatattcagc caaatttatt tgttctgttc ccacgaattt atacagtgac
     1621 agtatcagca gctccttcgc gtggttgcat tgggatgcaa tgcctgaggc gctcaaatac
     1681 aaactgcaat accgcatagt tggcggaacc tggacttcaa taaatgttac gggcaataat
     1741 aaaatcgtaa caggcctaac tgcaaaaaca aaataccagt ggcgtgtgaa aactatttgc
     1801 tcactcagtc ctgctctatc ttctgattat tcagttacaa aatcatttat aacattaggc
     1861 gctgctttct caaatgtttc aactaataaa aatagcgaag caatagctgg aaatcaaaca
     1921 ggcttgaagt tgtttcccaa tcctgctaca aaaatggtga gtttgcgatt gaatgggatc
     1981 aacgaaacaa gcatgcaact aaaaatatgt gacctctcag gaaaagaatt aaaacaatat
     2041 aggtttatag cagttgataa aacgtttgat caacagattg atgtctccgc acttcctcct
     2101 ggttcttatc tagtgattgt atccggaagc aaacaaaaat ggacacagat cttagtaaaa
     2161 caataagcgg aaataaatca acgcatgaag aaaatacttc tggctacagg gctgtttgtt
     2221 ggagctcata ttaatgttac agctcaattt tcacaaggcg caaaagactc cgctagaatg
     2281 gaaattcaac agttaactaa tgactggaac gaagtaatta tacatcctga ttctgtgaag
     2341 ctggataaaa tattagcgcc cgaatattca ttgaacgggt tggtcaatcg cggtatttgg
     2401 atggctaata cattgcatca tctaactaca gatagtttgg agattttagg ggcgttaaat
     2461 atcacttttt atggacaagc agctaagagt gaaggtgttc tttattggaa agctgcttat
     2521 gcccctggtg caattcattc tggcccatca acaatcaatg ccgaattcct ggtcacggat
     2581 atttggataa aacgtgatgg ccattggcag gtgttgataa gaatgtccct tccatcaaaa
     2641 atgaggcaat aagttcttta ccaggcttgc tgcaaccaat atcattaact gaattgcctg
     2701 ttaacatgta aaattaaatt ctcatgaaac cattattgtt tcttgttctg accatgcttt
     2761 atctaaatgc tttttcgcag caaagtataa gtgttcaacc cataaagcct gatgaaagca
     2821 ttcaacaggc gcttctgcaa aaaacacagc gcttcaccga agcatggggc aaaagcgaca
     2881 ctggcacctt aagtaaacta ctcgccgcgg aatatcggca cagtgacata tggggtaaaa
     2941 tccagcacaa agaagattgg ctagcttatg ctgctgcgcc aaggaaaatt tcagacatcg
     3001 ttagcagtga tgtcgaaata ttactataca ataacaatac tgctgtaata acaggaaaaa
     3061 tgagttatct atttggcgaa gaaaaaataa tgcaggaaat caggttcacc cagctttgga
     3121 caattagtga agctgaatgg aaacgcacgg cctttcaggc aactttaatt gataagtcaa
     3181 aataagtttt tatgtaaggt gttttgttta atgtgcattg atcagttccc acgaacatgt
     3241 tgagagtttt tttgtatcag gggtttcgat aaacggtgat ctttaatgta actatcggga
     3301 tcacaaaaca cgcggttctc tttctcgtct ttaaaactta aaaatggatt cgttaaattg
     3361 tgcggaagaa aattcagaac cgcagattat tttgaaagcg attattattg atgatgaagc
     3421 gcggagccgc aaggccttac aaattgccct gaacgattac tgcccttcaa tacaaattgc
     3481 cgttattgcg gaaacagccg aaagtgggat agaagcaatt attaaacata agcctgacat
     3541 cgtatttctt gacgtacaaa tgcccggcat gagcggcttt gatctgttag ctcattttcc
     3601 ggaaatcaat tttgacgtag tatttatcac ggctcacgac cattacgcaa ttaaagcgat
     3661 ccgctttagc gcgcttgatt atttgctgaa accgattcaa atcgatgaat tgatggcggc
     3721 ggtaaaaaaa gctgaggaga aaaaaaacta ccggcatatt aactggcagt ataaatccct
     3781 gtatgaaaat gtgcgaagcg ggcacaatgc ctccggctct gtagcggtgc caacgggcga
     3841 tggactgctg cttattaaaa cgcagcagat tatccgttgc gaggcagaag ggaattatgt
     3901 tcttatcttc caggagggca gagaaaaaat gcttattaca aaaacgctgg gtgatatcga
     3961 atccatgctc aacccaaaag aatttttccg ggtacataac tcacatatcg ttaatctttc
     4021 gcacataaaa aaatacgtaa agggcgatgg tggatatgtt attatgagcg ataattctac
     4081 agtggatgta tcgcgcagaa agaaagaaga gtttttacaa atgctaagct cccggtgaat
     4141 ttataggcca ggattatgga ccagcaaaca atccgtttca gtcatgatca aacaaatatt
     4201 attggaagta agctttcaca gattgaacaa agttatcaat aggattaaag tctgtacgta
     4261 acgcaacaca cattaggatc agaaatgcaa tcccgtataa cgctccccat aaatgcgctg
     4321 aatggttaat gccaccacca ccgcgcttcg ctaaatatgc tgtgaggacc aggtaaagcg
     4381 ggccgaaaat aaacccggga atgatcggag gtataaaaaa caagccgatc ttctgttccg
     4441 gaaagagaaa tacccctgca aagacgactg cagataccgc tcctgatgcc cccaaactcc
     4501 tgtagtaatg atcgtctttg tgactcatat aggtggggat caggcacacg gcaagcgccg
     4561 atatgtacat gaccagatat agtagtttgc cgctgtcgcc aaaaatttgc aggaaagcgt
     4621 cttcaaccaa tccgccaaac atatagagtg agatcatatt aaaggcgagg tgtccgatat
     4681 ctgcgtgaat taatccatta ctgaagaatc ggtaccactg cttttctctc gaaattgccg
     4741 gtggataaaa gatgagtttg tttaagagtt cctggttact gaaggccatg aacgaaatga
     4801 tcgccgtgat gataacaatg ataacagtga tactcatgtg ctctgaattg aactaaagat
     4861 agccgttaag tgtgatggta tttttcattg cgcaaaatac tacatgcgcg gtaaacctgt
     4921 tctgcaagaa taagacgcac gagcatatgg ggaaacacaa gtttagataa gctccaggta
     4981 aagtttgctc tccgctttat ctcttcactt acgccaaacg cgccaccaat taaaaaaata
     5041 agactgcgcg tattacctga caaatgtctg cgtatcaatt ccgcgaactc cacagaactg
     5101 agtagcgtcc ctgactcatc cagcaatacg aggaaatctt ccttatttaa ttttttaaga
     5161 atcgcttttg cctcctgctt ctttagatcg gatcctggta acgaagatgc gtttttcgga
     5221 gaaggaacta agagccattc aaccggaaaa taattattga tgcgcttgct gaaatcttca
     5281 atccctttct ttacataatc gtcatgactt ttgccgatgc tccagaattg caatttcatg
     5341 cggtaaatta acagtattct tcagaaatct ttttagctgc gttgtcgatt gcggataact
     5401 ttgttttact taatgaagtt gccgcattta tactactgtc tttttctttt gttgctctca
     5461 tcctgcgaac gggagatcaa cctcgaagtg caaaaccagg cgccgaagtt ggttgttgac
     5521 gcaagtattg aaaataacag cgctcctgta gttgtgttat caagttccct gaattatttc
     5581 ggtacaattt cgccggaaga gctttccgct tcgtttgtgc acgatgcagc ggtaacgatc
     5641 acagacggtt ttaagtcggt taatctcgtt gagtatgcgt acagggattc gtcgggcttt
     5701 gatctctatt actacaccgt tgattatacc gatccgcaac atgtcttgtt aggagagctt
     5761 aacaggagct acatgctgac catcaagcta agtgatagct cggtatacac ttccaccaca
     5821 acaattccgc tcttgaaaaa aacgtgtgat tcgttatggt ggacgcctgc tccgaacaat
     5881 ccggatccat cgcgctgcgt tttgtttggc cgctttcacg atccgccggg tttaggtgat
     5941 tatgtacgtt atttcacgaa agtaaataac gagccgtttt accccggcta cacgtcggca
     6001 ttcgacgacc aggtggttga cggcaccacc tacacatttc agatcccacg cggttttaat
     6061 aaaaacgaca ctgcgcaggt aagtaataac gaagattttg gattttttca ccgcggcgat
     6121 atgataacct ttaagttctg caatatcgat aaggctacct tcgatttctg gcgtacctgg
     6181 gagtttgctt ttcaatcgaa cgggaatcca ttttcttcac ccgtaaaagt gatcggcaat
     6241 gtgagcaaca atgcgcttgg ggcgttttgc gggtacgcgg cgcaatatct gaccattcaa
     6301 attcctttct gatcactgac tgtgcataag tacgtccaaa acaaccgggc gtttattatt
     6361 tttgctgcat tcaaaaaata tttgagggtt gttgaaggcg cacctgccaa agaaaatttt
     6421 ttggcggtca gggcttcata aatattcaca ttaggagacg ggatgaatta tggataaaat
     6481 tcaaaagaca cattgtttga tcattggctc tgggcccgca gggtacacgg cagcgatcta
     6541 tgctgcgaga gcaaacatga aacccttgtt ataccaggga attcaaccgg gcgggcaact
     6601 gactataacg actgaagttg aaaattatcc ggggtatgcc aatggtgtgc agggccccga
     6661 aatgatgatc gattttgaaa agcaggcagc ccgcatggga gcgaagatct gttatgggct
     6721 tgcaacgaaa gttgacttta cgggtcccgt tcacaaggtt tggatcgatg aggaaaaatt
     6781 ggtagaagcc gattcggtca taattgcaac aggcgcatcg gcgaaatggc tgaaccttga
     6841 gagcgagcaa cgattgaacg gatacggcgt aagcgcgtgc gcggtatgcg acggtttctt
     6901 tttccgcaat aaagaagttg cgattgttgg tgccggcgat accgcttgtg aagaagcact
     6961 ttacttgtcg aagctttgtt cgcatgtgca catgatcgtt cgcaaggatg agcacggcat
     7021 gcgcgcaagc aaggtgatgc aggaccgtgt aagaaatacg cctaacataa aaatttactg
     7081 gaacacagaa actgttgaag tgctgggcga acaccgggtg gagggagtta aagtaagaaa
     7141 caacaagtca aacgaagagc aaacaatacc cgttagtgca ttcttcgttg cgatcggtca
     7201 tgagccgaac agcgcaattt ttaaaggatg gattgacatg gatgaagcag gatatattaa
     7261 gacgatgccc ggttcagcgc gcacaaatgt ggacggtgtg tttgcggccg gcgatgtgca
     7321 ggataaaatc tatcgccagg cagttaccgc cgccggaagt ggttgtatgg cggcactcga
     7381 tgcagaaaga tacctcggcg ccaaagaagg tgcttgagta tccggggttg ttgattattg
     7441 catattcagt tgaacaatct caaactttaa aacaaacaga tcttgcttcg catagtcggt
     7501 gcaaaaaaca aagagaaaga atctcacatc ctttctctct tctgtcaact gtaaactgtc
     7561 aacgaaatat ttttaggcct tcttcttcgc tcccttgggc gcaaagatcg caagcattct
     7621 tttgccttcc attttgggta agccttccaa tacgccaact tctcccaaac gttcagcgaa
     7681 tttcagcagc aagagctcac cacgttcttt gaacataatt gcgcgtcctt tgaactgcac
     7741 gtacgccttt actttattac cctcttttaa aaatttttca gcatgtttgg tcttaaagtc
     7801 aaagtcatga tcatcggtgc cgggcgtgaa acgaatttct ttcacttcgc tttgtttggc
     7861 attcgccttc atttcttttt ccttacgctt tttctcgtaa agaaatttct tgtagtcaat
     7921 taccttacaa accggaggat cagcatttgg tgagatttct accaggtcca gttcctgttg
     7981 ttgagcgatg cggagagctt cctgtgtagg gtaaacaccg acgtttacgt tttctccaac
     8041 taaacgaacc tgcggtaccc ggattctttc gttgatgcga tgttcaggct ccggttgcct
     8101 gataaaacga ggattgaatc ttcctctctg tggtaaagcc attaagtgtt gtttcgtgaa
     8161 taattataac tgaataaagg taaaaccttg tttttgattt caaaatcaat tcctgttctg
     8221 aatttcttcc gacagcatgt ttatcaattc ttcgatagtt ttcgaaccgc cgtcagcagt
     8281 tccatgcttt ctcaccgcga gctttctttc cgttgtttcc cgttcgccga tcaccagcat
     8341 ataaggtact tttgctattt cagcctcccg tatctttttg ccaatttttt cgctgcgttc
     8401 atctacctcc acccgtatcc gggatttttt cagttgggta aagacttctt tcgaatacgg
     8461 caggaactta tcgctgatag gcaggatctt cacctgcacc ggagataacc ataacggaaa
     8521 tcttccggca taatgttcga gcaaaaagcc aataaacctc tcgtgcgtcc ctagcggagc
     8581 acgatgaatg attagcggag tctccgcctt gttatccggc gtggtgtatt ccagcttaaa
     8641 gctgcgtcct tgtgcaaaat ccacctggtt cgtcgcaagc gtaaattccc ttccgatggc
     8701 actccatatc tgcacgtcta ttttcgggcc atagaacgcg gcttcatcgt tcacttcaac
     8761 aaaaggaata ttcgcttcgg tcattacctc gcgtaccatg gcttctgttt ctttccaaag
     8821 ttccggttca ttcacgtatt tcaccccgag tttatcgggc gaatgcagcg acagtcgcat
     8881 aacatatttg tcgatcccga aaattttgaa atacttcagg tacatatcac tcaccgcacg
     8941 gaactcatcg ttaaattgtt ctttcgtgca atagatgtgt gcatcgttca tgtgaagaca
     9001 acgaacacgc atcaacccaa ataattcacc gctttgctcg taacggtata cggtgccgta
     9061 ctctgccaac cgcaagggta attctctata gcttctcggc tctgctgcaa atactttgtg
     9121 atgatgcgga caattcatgg ccctcagata atactttaca ccttccagtt ccataggtgg
     9181 atacatgctg tctgcataat aaggaagatg gccgctggtg aggtaaagat tttctttggc
     9241 gatatgcggt gtaacaactc ttttgtatcc accgtcttcc tcagtttctt ttgccagttt
     9301 ttcgagctcc tcaataatgg tcgcaccatt cggaagccat aacgcaagtc cgggcccgac
     9361 atcatcgtcc atcgtaaaaa ttccaagttc ttttccaagt ttacggtgat cccgcttctt
     9421 tgcttcctcg agcatcgcca ggtactcatc caactctttc tgattaggaa aagagacgcc
     9481 atagattcgc gtcagcattt tattcttttc atcgcctttc caataagcgc ccgccaaact
     9541 ggtgagtttg atcgctttta tgaaaccagt gttgggaata tgcggtccgc gacagaggtc
     9601 tgtgaaatta ccctgcgtat aaaagctgat cttgccatct tgcagtccct gcaaaaggtc
     9661 cagtttatac tcatcgccct tttctgtgaa atagcttact gcttctgcct ttggtatctc
     9721 tttcctgata taagcattgt tctgtttagc gagctcattc attttcttct cgagctcccg
     9781 gagatcttct tcactcatct ttcgatcgcc gaggtcgaca tcatagtaaa agccattctc
     9841 aaccggggga ccaacccaaa attttacacc cgggaagagg ctttcaacgg cttcagccat
     9901 caaatgcgca gacgaatgcc agaaagtaga ttttccttcg gcatcattcc aggtgagcag
     9961 ttttacttct gcatcctcgt aaataggccg cattgagtcg cgcacttcgc cattcacctt
    10021 tgcagcaagc acttttctgg ccaaaccttc gctgatcgat ttcgcaatat ctaaagcagt
    10081 aacaccattt tcatactgac ggacagcgcc gtcgggaaaa gtaatattga tcatagttca
    10141 tgaatcgtca atcgtgaaac tgaattccta attcctaatt cttttgacgg gctgcaaaag
    10201 tagcgaatca tagcgacagc ggaagaagct cccaactaaa cgaagctaaa cgatcgtaaa
    10261 accttaactg ttctttaaat tcacctccaa ttagttttgt aacatgaagc aacggatggt
    10321 tcttgccgct ttcttattga tctcctgcaa catatttgga caagacctta ccggcatctg
    10381 gcgcggttac ttctacgcga gcgtgggtcc ttacaaggaa tactataaat acgaggtaca
    10441 gatagaccag ctaaaaaatt attcgctcga gggcgttacg tactcgtacc gcactactgt
    10501 cttttacggc aaagctacct ttgagggcat ttggtttccc aaaacgcaaa gcatattgct
    10561 gaaagaactg aagttagttg aactgaagat acagggcaat agcgaagctt gtgctatgac
    10621 gtgtacgctt gattacggga aagatggaaa aacggaaacg cttaccggca ccttcaccag
    10681 cgtgaatacc gactccagaa gggattgcgg ttcgggaacc gtttacctcg agaaagtgac
    10741 cgagtccgat ttccaaaaag aagatttcct gctaaaaaaa tcgacgccta ccgcgccgcc
    10801 tgttactaac aattctccca ataacaatac aacgaataac aatgcaaagc cgaaagtgtc
    10861 ggctccggct gtaaacgatg tctcaaaggc aaatgcaaaa aagttgcagg cggctctcgg
    10921 tgttccggca gacggtgttg ttggaccgaa aacaatggca gagttgaagc ggaaagttcc
    10981 cggtttcacc gataagcttg accttaataa taccgcccag gtgaataagg ttatcgacca
    11041 ggtgaaaaaa agcaacgtaa cagtcgcgaa aaagccacag ccgaacacta cagcgcaaac
    11101 gaagacgcag ccgaaagctc cgccttccac accggctaag actcagcaga aaacgcagcc
    11161 accggtagta agtaaaaagg atacaatagc aaagacgaca attaccccgc catcagcaac
    11221 acaaacggaa ataaaagagc tacctgcaaa gaaacccgtt cccgtccctg aggtgataaa
    11281 aacgagaagc aacccattgg tcaagacgat cattacgaca atgccggata tcaaaattga
    11341 attgtatgat aacggcgaaa ttgacggaga cacgatcact gtttatcaca acaacgaagt
    11401 tatagcctgg aagaaaggtc tgaccgataa accgatcgtt cttaacctgc acgccgatgc
    11461 taataatact atgcacgaat ttgtgatggt tgcggataac ctaggcgcaa ttgctccgaa
    11521 caccgcactg atgatcattt caactggtgg caaacgttat cagctcttca tctcgagcga
    11581 caaacaaaaa aatgccaaag tggtgatcca gtataatccg gctacccaat aaactttctg
    11641 atttactttt ggcgctgtcg cacgcagttc cttttttttc aatttgacag catgaattta
    11701 tcgttggttg acaaatacgc gatcgtttgc gggagcaccc agggcatcgg cttggccatc
    11761 gccgaagagt tagcattgct tggcgctaac tgtacattgc tcgcccgcaa cgaggaaaaa
    11821 ctaaaagagg ccttgttgca tctcgacata tcattgcgcc agcagcacaa tttccttgtc
    11881 gctgatttca gcaagccggt tgaagtaaag aaaataatac tcgcacatgt gcagaataac
    11941 cctgttcata ttctcgtcaa taacacgggc ggtccgcctg ccggcgcgat cgtagatgcc
    12001 gcagagcaaa attttttgga tgcattcaat cagcatctca tctgcaatca tattttggct
    12061 gaggctgtta tcccttcgat gaaggcaaat gcatacggac gaataataaa tatcatttca
    12121 acttcggtga gaattccatt aaagaattta ggcgtgtcaa atacgatccg cggtgcggtt
    12181 gcctcatggg caaagacaat ggcaaatgaa ttaggacagt acaatatcac cgtcaacaac
    12241 atcttgcccg gttctacaaa gacacaaagg ctgggcagct taataaaaac caccgctgaa
    12301 aaaacgaaaa aaactgttga gcaggtagaa aagcaaatgc aggaggaaat accgatgaaa
    12361 cgttttggcg atgtttctga actcgctgcg gtggcagcat ttctcgcgtc gccggccgcg
    12421 tcttacatta atggtgtgag tattccggtt gatggtggga ggactggttg tatttagttt
    12481 gaggtttgac gtttgaggtt tgaagtttga agtttgaggt ttgaggtttg aggtatgaag
    12541 cgtcgtttat tacttagccg tgcgatagta tggggaagcc ggaaagttaa acagccattc
    12601 acaattgaca attcaccatt cacaatcgaa cgtttagttt taaaattctt taaacgagtt
    12661 ttccctgaca gaccttgaca taccatatta tttagagaac tacatcggcg gcaaactgat
    12721 cggccaactc agcgggagat cgattgaatg catcgatccg gcaaccagcg aagtgtttgc
    12781 gcatgttccg gatagcgatg agaaagatat tgagctggcg gttcagtttg cactggaagc
    12841 gtttgagaaa tggagtgtga cgccggttga aaaaagattt caaatactca accgcattgc
    12901 cgacctcatc gatgaaaacc tggatgctct tgcgctcgct gaaacaaacg atacaggaaa
    12961 gccgctttgg ctaagtaaga gtgttgacat accgcgtgca tctgcaaact tcagattctt
    13021 cgcaacaggc atcatgcatt ttgcgagtga aagtcaccag atggaggata aggccattaa
    13081 ctatacgctg aggcagccga tcggcattgt tggttgtatc tcgccatgga atctcccttt
    13141 atacttattt acctggaaaa ttgcccctgc gctcgctgca ggaaattgcg tgatcgcaaa
    13201 accgtcagag gtaacaccgg taactgcatt cttgttaagc aggatctgca acgaagcagg
    13261 tttacctgcc ggcgttttga acattgtaca tggaaccggc aacaggactg gcgaagcaat
    13321 cgttgcacat cctgaaataa aagcactctc cttcaccggc agcacaagag ccggcgcgag
    13381 aatagcatct gtcgcagcgc caatgttcaa aaaactctcg ctggaactcg gcggaaaaaa
    13441 cccgaatata atttttgccg attgtaattg ggagcggatg atgaatgaaa cgattcgctc
    13501 gtcattcagt aaccagggac agatctgttt atgcggcagc aggatactcg ttgaaaaaaa
    13561 tatttacgaa aaattcaaaa ccgaatttct tgaaagaacg aagcagctta ccgtgggaga
    13621 tcctttggat aaaaaaacaa agcagggtgc tatcgtaagc aagctgcatt ttgacaaagt
    13681 gatgagctgc gttgaaaccg caaaacagga aggagggaag atcttatgcg gcggccattc
    13741 ggtgaaagtg gaaggcagat gctcgaatgg attttttatt gctcccacgg tgatcgaagg
    13801 tctcggcccg tcgtgcaaaa cgaacatgga agagatcttc gggccggttg ttacgctgca
    13861 gtctttcgaa actgaagaag aggctttacg gttggcgaat gctacaggtt atggtttatc
    13921 ggcaacgatc tggacacagg atatttcgaa ggcaaatcgt gtggctgcaa aaacgcaaag
    13981 tgcaattatt tgggtgaatt gctggcttct gcgcgatctc cgcactccgt ttggcggaat
    14041 gaaaaatagc ggtgttggaa gagaaggtgg atgggaggca ttgagattct ttactgagtc
    14101 gaaaaacgtt tgcgtgcaat tatagcttgg agaaagttat tgatcgtcaa ttttcgcctc
    14161 cgcagccgag gtgatcttca gatcattgcc acgttgcgca aatgcaatta ccatgcagtc
    14221 atgatgtgat aaaccgttgg gcacagtaac gactgctttt ccttcatttg cttccagggg
    14281 aattgtttta atgtccctga caatattcac gtgatgtagt gacgcgccgt gattttctcc
    14341 agccgatatt ttattttccg ccttgagttg aactaatgcg acgttcaagt tgcccgtatc
    14401 attcgtttta taggaaacat aaatctcttt gtcatctttt gttacagcgg tgatctcaag
    14461 cattttctgc gctggcagtt gtaggtcgcc gtcaatagtc ttgcgcaatc ttaccttatc
    14521 ggaaccaacg aactgttcca ctccattcac aacgacttgc ggcgtgtaga tcgttggcaa
    14581 ttttaatgtg cgcgcataat tcttttgccg ctgcg
//
LOCUS       DASQJI010000609         1927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2842064,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000609 DASQJI010000000
VERSION     DASQJI010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2842064"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1050
                     /locus_tag="VEV83_16640"
     CDS             106..1050
                     /locus_tag="VEV83_16640"
                     /inference="COORDINATES: protein motif:HMM:NF039847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46809.1"
                     /translation="MYEARLSIETARKTGVSTHLLAWSKRGGNDIVKKWIADGQIGTL
                     REIHNWSDRPFWPQWSANPTDLPPVPEGFDWDLWLGVVPHRPYHPNYTFNVFRGWYDF
                     GGGSIADMGHYSLWPMFLTLGINTAPVSAEALGAKTCRVENQVCEDVVNDVAFPYSCI
                     IHFKFPKQETLPPFDLYWYDGGMKPATPEELEGGSLEPEGMMFVGDKGKILSGFRNES
                     PRLLPDSKMKAFLNGQEAPKDVNEQGTKYWIDAFKNNTQSPGSFLNALPVSETILLGA
                     VALRARKKVLYDSQNMKIINDADANKFLYREYRKGWEL"
     gene            complement(1055..1804)
                     /locus_tag="VEV83_16645"
     CDS             complement(1055..1804)
                     /locus_tag="VEV83_16645"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK46810.1"
                     /translation="MRSVFITGICMFTLLSAFSQVDNTQVKIPEGFVSLFDGKDLEGW
                     KIPDGDNGHWKILNGVIDYDAESEAKGDKSLWTKKPYKNFILYVDFRIKATPWKNPEV
                     PIILPSGLHKLDENGNEITMVVPDSDSGILLRGVGKCQANIWCWPIGCGEVYGYRMDT
                     TMSPQVRRGATPKTNADKNIGEWNTFKITFKGDRLTVELNGTVVIDNAQMPGIPESGP
                     IGLQHHGDKENGEWVSPPALVQFRNIYIKEL"
BASE COUNT          535 a          445 c          435 g          512 t
ORIGIN      
        1 tgatgcagta aagatcatga cgccagacca tatgcatgcc tacatttcaa tagctgcaat
       61 gaaagccggt aagcacgtgg taattcataa gccgatcggc aatcgatgta cgaggcaaga
      121 ttatcgattg aaacagcacg aaagaccggt gtcagtactc acctgcttgc atggagcaag
      181 cgtggcggaa acgacatcgt aaaaaaatgg atagccgacg gacaaatagg aacactccgc
      241 gaaattcata actggtctga caggccattt tggccacaat ggagcgcgaa tccaacagat
      301 ctaccgccgg ttccggaagg atttgattgg gacctctggt taggtgtcgt cccccacagg
      361 ccttatcacc cgaattatac atttaatgta tttcgcggat ggtatgattt cggtggcgga
      421 agcatcgccg acatgggaca ttatagtttg tggccgatgt tccttacact cggaataaat
      481 acggcaccgg tgtcagccga agcgcttggc gcgaaaacct gccgtgtcga aaaccaggta
      541 tgcgaggatg tggtaaatga tgtggcattt ccatattcat gtatcattca ttttaagttt
      601 ccaaaacagg aaacacttcc gccctttgac ctgtattggt acgatggcgg aatgaaaccg
      661 gcaacaccgg aagaactcga aggaggatcg cttgagcccg aaggaatgat gttcgttggt
      721 gataaaggga agatcctttc aggtttccgc aatgaaagcc ccaggttgtt gccagatagt
      781 aaaatgaaag ctttcctgaa cgggcaggaa gccccgaagg atgtgaatga acaaggcacg
      841 aaatattgga tcgatgcgtt caagaacaat acgcaatcgc cgggcagttt tctaaatgcg
      901 ttacctgttt ctgaaaccat cttactgggt gccgttgcac ttcgcgccag aaaaaaagtg
      961 ctgtacgact ctcaaaacat gaagatcata aatgatgctg atgccaataa gttcttgtat
     1021 cgcgaatatc gaaaaggctg ggaactttag ttcttcacag ttcctttatg taaatatttc
     1081 tgaactgaac taaggcagga ggacttaccc attcgccgtt ctccttatcg ccatgatgtt
     1141 gtaaaccgat tggtccgctt tcaggtatgc cgggcatttg tgcattgtcg atcacaacgg
     1201 taccattcaa ttctaccgtt aagcggtcgc ctttaaaagt gatcttgaaa gtattccatt
     1261 cgccgatgtt tttatcagcg tttgttttcg gtgtggcacc ccggcgcacc tggggtgaca
     1321 tagttgtatc cattctataa ccgtacactt ccccgcagcc gataggccag caccaaatgt
     1381 ttgcctggca ttttcccacg ccgcgtaaca gaatgcctga atcagaatca ggtaccacca
     1441 ttgtgatctc gttgccattc tcgtcaagct tatgcaaacc gcttggcaaa ataattggca
     1501 cctccggatt tttccacggc gtcgctttaa tgcgaaagtc gacatacaaa ataaaattct
     1561 tgtagggctt tttcgtccaa aggcttttgt cgccctttgc ttcactttct gcatcgtagt
     1621 caattacccc attcaatatc ttccagtggc cattgtcacc gtctggtatt ttccaacctt
     1681 ccaggtcttt cccgtcgaat aatgaaacaa aaccttccgg aattttcacc tgcgtgttat
     1741 ccacctggga aaatgcagac aacagggtga acatacaaat accggttatg aaaacagatc
     1801 tcatatacaa gcgtttttta tttagaagaa ataacaatta atggataaag caacgaatta
     1861 tttttcagtc acgagccttt tggggatcaa caattcgaaa cgcatttcgt ctgaattcat
     1921 ggcacat
//
LOCUS       DASQJI010000610         7320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1153167,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000610 DASQJI010000000
VERSION     DASQJI010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7320
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153167"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VEV83_16650"
     CDS             complement(<1..1413)
                     /locus_tag="VEV83_16650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK46811.1"
                     /translation="MTKLKVGVIDLVISGPIHSMWARVMHANLASIMPQVVATWCEQE
                     GHDVKMICYTGVEDLSKELPQDVDLVFICSFTHAALLAYSLSNYFRSKGTVTVLGGPH
                     ARCYPDDAVKYFDYVLGFTNKSTVIEVLENCAPQGEVGRQLSARQQPAVLPGVEERWK
                     FVADTLKKAPFIKFVPMIGSLGCPYTCSFCIDSTVNYQALSFETMQNDLRFLLTKFKK
                     PVVAWHDPNFGVRFHENMGAIAAVARPKSFRFIAESSLSILSEDHLKEMHKNGFIGML
                     PGIESWYDLGNKSRTAHMAAEDKLKKISEHVNTILHYIPYLQANFVLGLDTDSGDEPF
                     ELTKRFIDMSPAAYPGYSLVSAFGEAAPLNLEYQKVNRVLPIPFPFLNTSSMNIKPKN
                     YGWVDFYDKLIDLHSYSFSARAVYRRFQATDDFTSKWMNLMRAVTQKGKGGHGRLKFY
                     QLVRQNLIEDRNFRDYFEGET"
     gene            1970..2419
                     /locus_tag="VEV83_16655"
     CDS             1970..2419
                     /locus_tag="VEV83_16655"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK46812.1"
                     /translation="MKTFVFLLIMNIFYQYVPTQTSIASNADLIKEYLKSKENIMQQN
                     ATTEDVEKLMSFYSDSLYYEHVLSPEKKFAFHGKDDLRSGYTSHLGETNDAKIKLLTL
                     IEKQNIVIVQYSLIREIISSHKTEESKIVSIFEFDDKAKIKHMTDYL"
     gene            2626..3657
                     /locus_tag="VEV83_16660"
     CDS             2626..3657
                     /locus_tag="VEV83_16660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HYK46813.1"
                     /translation="MPSENIYRYIFIDEQSVTPKYLQLTNSIVKGINSGRIEQNYVLP
                     SINDISYELEISRDTAERAYRQLKKMGIIGSVPGKGYFIAKTEFNRPLKIFLLFNKLS
                     THKKIIYDSFVAALGEKAAIDFYIYNNDFSLFKKLLENKRDDYDHYVIIPHFLEGGVH
                     ADEIINALPKQKLVLLDKLLAKVDGAYGAVYENFEKDIYGALEQALPHLKKYDALKII
                     FPSYTYFPQEILNGFTRFCQQYAFSHKVVHKIANETVAKGEVYINLMEDDLVVLIEKI
                     LCTSLQVGKDVGVISYNETPLKKIILDGITTISTDFKLMGEKAAELILKKSNEHVEIP
                     FHLILRKSL"
     gene            4200..5870
                     /locus_tag="VEV83_16665"
     CDS             4200..5870
                     /locus_tag="VEV83_16665"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK46814.1"
                     /translation="MKKTFADIRAILTSPERRKFTTLIFLNTLLSIADIGSIALLFVV
                     LNLYSGRSIGAMGPMFEKLNLRQQSLAPALILIVIFLAKGIAGYLVSKTQFRYIFDTA
                     SRLTGKNLLMYLEGSYEDHVNIDSAVWVRRICFQPIEFAQYVLACTQQVINESILILV
                     SITALALYNLQLLVIVSLVLLPAILVLSYITKRRLKETRKNIQAANELSLQHLNEAIE
                     GFIESNIYDKNALFIERYTKSQFTVNRFIANMQVTQAIPGRFFETFAVVGFFILIASI
                     NFSSSENSVSVFMLGAFVAAAYKIIPGISRIINFGGQIKTYLFTVNELAAQKINVRHE
                     TIPFNDPIGKIEMRNIEFAYGNNTVFKDLSCIVNEHSLTGIRGRSGKGKTTLIDILLG
                     FLAPRAGSVFVNGKKMQPSELRNMWPQIAYVKQTAFLLHDTIANNITLYKTDGDKKKL
                     ADVIGIAGLAEWIDQLPGGIDTMITEGGKNISGGQRQRIAIARALYKDSSVIILDEPF
                     NELDETSETRLLQHFKKLSRDRIVLLVTHSTHALNVCDHIIDLDEYEN"
     gene            5854..6927
                     /locus_tag="VEV83_16670"
     CDS             5854..6927
                     /locus_tag="VEV83_16670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK46815.1"
                     /translation="MSTKTNALLIFSPAFAADETDTAWLPSLQNFVRALNKNFPQLKV
                     IVFAFQYPHSDQKYNWHKTEVIPFNGLHKNKASRLMMWAKIFIHVRQIKRSHEVLGIL
                     SMWCTECAFVGKYAARFFELIHFCWVVGQDARAANRYVKRIRPQPSSLITISDFLVDE
                     FYKNHRIKPRYVIPMGIDISLFAPQAKKDIDVIGAGSLSRLKQYHLFVEIVAKLKKNF
                     PGLRAMLCGDGEDRNRIEEMIRQHSIEEYVALTGHIPYAEVLNLMQRSKILLHPSSYE
                     GFGMVCLEALYAGAHVISFTQPMHHDIKNWHVVKTTDEMQAKASELLASSNTVYEAVL
                     VYSMDDTAKAIISLFGYGGTPDR"
     gene            complement(6895..>7320)
                     /locus_tag="VEV83_16675"
     CDS             complement(6895..>7320)
                     /locus_tag="VEV83_16675"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK46816.1"
                     /translation="DFPQTQFLMLGVELIADKASYLENIFGDKLINLVGKTNPAEAFA
                     IIQKVGFVLSEDSGLMHFAWVSGIPTFALFGSSRSDWSRPLGAHTFFLDSSDLPCGNC
                     FMARCKYGDTHCLTRFTAEFVFEKAKALLSSIRSSTIPE"
BASE COUNT         2121 a         1588 c         1593 g         2018 t
ORIGIN      
        1 tgtctctcct tcaaagtaat ccctgaaatt gcggtcttca ataaggtttt gtcgcaccaa
       61 ctggtaaaac tttaaacgtc cgtgaccacc ttttcctttt tgtgtgacag ccctcatgag
      121 attcatccat ttggaggtaa aatcatccgt tgcctggaaa cgcctgtaaa cagctcttgc
      181 tgaaaaagaa tagctatgca agtcaatgag cttatcataa aaatccaccc agccgtaatt
      241 cttcggctta atgttcatgg aagatgtatt caggaaagga aaaggaattg gcaacacccg
      301 attcaccttt tgatattcca ggtttaacgg agcggcttca ccaaaggcgc tcaccaaaga
      361 atatcccggg tatgcggccg gcgacatatc tatgaaacgt ttggtcaatt caaatggctc
      421 gtcgcccgaa tcagtgtcaa gacccagtac aaagttggcc tggagataag ggatgtagtg
      481 aaggatcgta ttcacgtgtt ccgatatctt ttttaatttg tcttcggcgg ccatatgcgc
      541 tgttcgtgat ttatttccta agtcgtacca tgattcaata cctggcagca ttcctataaa
      601 cccattctta tgcatttctt tcagatggtc ttcagaaaga atcgacaggc tgctttccgc
      661 tatgaaacga aaactttttg gacgggctac tgcggcaatg gcacccatat tttcatgaaa
      721 gcgtactccg aaattcggat cgtgccatgc aaccacgggt ttcttaaatt tggttaggag
      781 gaacctgaga tcgttctgca ttgtttcgaa gctaagggcc tggtagttca ccgttgagtc
      841 gatacagaac gagcatgtat aagggcaacc caggctcccg atcattggta cgaactttat
      901 gaaaggagct tttttcaaag tatcggccac aaatttccaa cgctcttcca cgccgggaag
      961 aaccgcgggt tgctgtctcg ctgaaagttg cctgccaact tcgccctgcg gtgcgcaatt
     1021 ttcgagaacc tctataacag ttgatttatt tgtaaacccc aacacatagt cgaaatattt
     1081 tactgcatca tccgggtagc aacgtgcatg cgggccaccc aacactgtta cagtgccttt
     1141 actccgaaaa tagttgctaa gagaatacgc cagcagggcc gcatgtgtga aggagcagat
     1201 aaaaacgagg tcaacatcct gcggtaattc tttacttaaa tcttcaacac ccgtgtagca
     1261 gatcattttt acgtcatgac cctcctgttc acaccaggtg gcaacaacct gtggcataat
     1321 gctggcgagg ttggcgtgca taacacgtgc ccacattgaa tgtattgggc cgctgatcac
     1381 gaggtctata actccgacct ttaattttgt cattctgtta ttttttaagt gattaggcct
     1441 cttgatcacc aacttttcat atgaaaagtt tgcccgttat gtatttgcaa tgatcaaggc
     1501 tgtcttaacc acgttacaaa tgtgagccga attaccctgg aaatcgttac acaattcttt
     1561 gaaaccgtta cattattcac aggttttgcg ggataaacgt gaaagtttct ttaaggtgtc
     1621 tcattactgc attaagtgct ttttggctcg ccgcgagggt tcagttcgaa ccggccgcac
     1681 cggtgcaggc catattttcg cggttgattt tattcatttg caattaagca gtattaaggc
     1741 tccaaattat tattttcacc attcctacgt cttttgatac cggaaagatc gtcttaaaat
     1801 gttggtttgc cgtgtctgaa ttattttggt tgaaaaaaaa cattgcggta cgtttcctcc
     1861 gagcctgaaa aatctcgaac tgaccgaaaa aagataactg acaaccgcac atcaatctaa
     1921 agcggcagcc aatgcaaaac tttctaaatt aacctcctaa aatatggtca tgaaaacgtt
     1981 cgtcttcttg ctcatcatga atattttcta ccagtatgtg ccgacgcaaa ctagtattgc
     2041 atcgaatgct gatcttatta aagagtacct aaagagcaaa gaaaacatca tgcagcaaaa
     2101 tgcaacaact gaggatgtag aaaaactaat gagtttttac tctgatagtt tatactacga
     2161 gcacgtgctg tctcctgaaa aaaaatttgc attccatgga aaggatgatc tgcgcagtgg
     2221 gtacacctca catttgggcg aaacaaacga tgctaagatc aagctgctta ctttaattga
     2281 aaagcaaaat atcgtaatag tgcaatactc tttgataagg gaaattattt caagccacaa
     2341 gacagaagaa agtaaaattg tttcaatctt tgaatttgat gacaaggcga agattaagca
     2401 tatgacagat tacttgtaac cggcattttt aatgatgaat gagcgctcgg ccgaacccct
     2461 tttgcctctt ttaaacgatg tgctgaaaag taccttatca tttctgattc tgatttaccc
     2521 gccttgatgt ggaaaaatcg ccaacgatca tcacccgatc cggcatgcct taactcagct
     2581 gattcttgtt ttcaaaaaca ttaggtttgt agaaacgatt gcttcatgcc ttctgagaat
     2641 atctaccggt acatcttcat cgatgaacaa tcagtcaccc cgaaatattt acaactaacc
     2701 aattcaatcg tcaagggaat taattcaggc aggatcgaac aaaattacgt gttgccatcc
     2761 atcaacgaca ttagttacga actggaaatt tcaagagata cggcagagcg cgcatacagg
     2821 cagttgaaga aaatgggcat catcggttcg gtaccgggca aaggttactt cattgctaag
     2881 accgaattca accggccttt gaagattttt ttgttgttca ataaactcag cacccataaa
     2941 aaaattattt acgattcgtt cgtggctgca ttgggtgaaa aggcagccat cgacttctat
     3001 atctataata atgacttttc acttttcaaa aagttgcttg agaacaaacg agacgattat
     3061 gatcattacg ttatcattcc gcattttttg gaaggcggag tgcatgcgga cgagatcatt
     3121 aacgcgctgc cgaaacagaa gttggtactg ctcgataagt tattagcaaa agttgatggc
     3181 gcctatgggg cagtgtatga gaatttcgag aaggatatct atggggcact ggagcaggct
     3241 ttaccgcatc ttaaaaaata tgatgcatta aagatcattt ttccatcata tacctatttc
     3301 ccgcaagaga tattgaacgg cttcacaagg ttttgccagc agtatgcttt ttcacataag
     3361 gtcgtgcaca agatcgcgaa cgagaccgtc gcaaagggag aagtgtatat taatttaatg
     3421 gaagatgatc ttgttgtgct cattgaaaaa atattatgca cttcattgca ggtgggaaag
     3481 gatgttggtg ttatttctta taacgaaacg ccgttgaaga aaataattct cgatggtatc
     3541 actacgatca gtacggattt caagttgatg ggtgaaaagg cagccgaact catcttgaaa
     3601 aaatcaaatg agcatgtgga gataccgttt catttgatct tgcggaagtc gttgtgagca
     3661 ggttttcgta atggccgcgc tttctctttc cagtctctgg ctatctctgc ttcctctgcg
     3721 cgcaagcagc aaaaagaccg ttcgaagcag gaagcagact atcttgcgga aagcaaacac
     3781 gccgtcattt ccgaaggagc gaaatcagca cccatttctt gcaattacat taccgcgact
     3841 gacaaatctc tacgcttaac cgccggtaaa atcacgttca gatttctcct aaagtcgaaa
     3901 cgacggcgaa tacgttgaga tttctccttg cgtcgaaatg acgattcgca gttttgttga
     3961 aacggaaaca gaccgtcatt tcgaaggagc gcaacgagca cccatttctt gcccttacgt
     4021 taccgcgact gagaaatctc tccgctaagc cgggaagagc acgtagagat ttctcctgcc
     4081 gtcgaaatga cgatggcact aacagcagag atttcttctg ccggcgaaat gactcgacat
     4141 tagccgcggc aacactttct ccgctacaga ctatattgca caaattattt tcgtcgatat
     4201 tgaaaaaaac attcgcagat atccgggcaa tactcaccag cccagaaagg cgtaagttta
     4261 caacgctaat ctttttgaac acattgttga gcattgccga tatcggttct atcgcactcc
     4321 tttttgtggt gttgaatctt tacagcggcc ggtccattgg cgcaatgggc ccgatgtttg
     4381 aaaaattaaa cctgcgacaa caatccctgg cgccagccct gatactcatc gtcatctttc
     4441 ttgctaaggg catcgcagga tacctggtaa gcaaaacaca gttcagatat atttttgata
     4501 ccgcgtccag gctcaccgga aaaaacttgt tgatgtacct ggaaggaagt tatgaagacc
     4561 acgtaaacat tgactccgca gtgtgggtta gacggatatg ttttcagcca atagagtttg
     4621 cgcagtatgt gctggcttgc acccaacaag tgatcaatga atcgatattg atccttgtgt
     4681 ccataacagc cctggccctg tataacctgc aattgctggt gattgtttcg ctcgtgctgc
     4741 taccggctat cctggttttg tcttacataa caaaaagaag attgaaggaa acaagaaaga
     4801 acatacaagc cgcaaatgaa ctttcattgc aacatctcaa tgaggcgata gagggtttta
     4861 tcgaaagcaa tatctacgat aaaaatgcat tgtttattga acgttataca aaaagccagt
     4921 ttactgtaaa ccgttttatc gcaaacatgc aggtaacgca ggcaataccc ggccggtttt
     4981 tcgaaacgtt cgcggtagtt ggttttttta tactcattgc atcgatcaat ttttcttcct
     5041 ccgaaaacag cgtcagtgtg tttatgctgg gcgcttttgt tgcagctgcg tataaaatta
     5101 ttccgggcat ctcaaggatc ataaattttg gcgggcaaat aaaaacttac ctgttcacgg
     5161 taaacgaact ggctgcgcaa aaaatcaacg ttcgccatga aacgattccc tttaatgacc
     5221 ccatcgggaa gatagagatg cgtaatattg aatttgcata tggtaacaat actgtgttca
     5281 aggatctttc ctgcatcgtt aacgagcatt ctctcaccgg cataaggggc cgctcgggca
     5341 aaggcaaaac aacgctgatc gatattcttc ttggcttcct tgcaccacga gcaggctctg
     5401 tttttgttaa cggcaaaaaa atgcaaccat cagaattgag gaacatgtgg ccgcaaattg
     5461 cgtacgtaaa gcaaaccgcg ttcttacttc acgataccat tgctaataac atcactttat
     5521 ataaaactga tggcgacaaa aaaaagctgg ctgatgtgat cgggatagcc ggacttgccg
     5581 aatggatcga tcaactaccc ggtggaattg acaccatgat cacggaaggt ggtaagaaca
     5641 taagcggcgg gcagcgtcag cgtatcgcaa tagcgagagc attatataaa gattcatccg
     5701 tcattatttt ggatgaacca tttaatgaac tggatgaaac ttctgagaca cggttattgc
     5761 aacatttcaa aaaactgtcg cgggatagaa tagttctatt ggttacccat agcacgcacg
     5821 ccttaaacgt gtgtgatcac atcattgacc tcgatgagta cgaaaactaa cgcactgctt
     5881 attttttctc ctgcgtttgc cgccgacgag actgacacgg cctggctgcc ttcgctccag
     5941 aacttcgtgc gcgcactgaa caaaaatttt ccgcaactga aggtgatagt atttgctttt
     6001 caatatccgc attcagatca gaaatataac tggcacaaaa cggaggtgat accgtttaat
     6061 ggccttcata agaataaagc gagcaggctt atgatgtggg caaaaatttt catccatgtg
     6121 cggcaaataa aaagatcaca tgaggtgctc ggtattctca gcatgtggtg cactgaatgc
     6181 gccttcgtcg gcaaatacgc agcccgtttt ttcgagctta ttcatttttg ctgggtcgtc
     6241 gggcaggacg cgcgggcagc aaataggtat gtcaaacgta ttcgaccgca gccatcgtcg
     6301 ttgatcacga tctctgattt tttggttgac gagttttata aaaatcatcg tatcaaacct
     6361 cgctatgtga taccgatggg gatcgatatt tcattgttcg cccctcaagc aaaaaaggac
     6421 atcgacgtga taggtgccgg ctcgctcagc agattgaagc agtaccatct gtttgtagaa
     6481 atcgtggcga aactaaaaaa gaacttcccc ggcttgagag caatgctctg tggtgatggt
     6541 gaagaccgaa accgaattga agaaatgatc aggcaacatt caattgaaga atacgttgcg
     6601 ctcaccggac acattccata tgcggaagtt ctgaatttga tgcagaggtc aaaaatatta
     6661 ttacatcctt cgtcttatga gggatttgga atggtatgcc ttgaagcttt atacgctggc
     6721 gcgcatgtga tcagctttac gcagccgatg catcatgaca taaagaattg gcacgtcgta
     6781 aaaacgacgg acgaaatgca ggcgaaagca tctgagttgc tagcaagttc caacacggtt
     6841 tacgaagcgg ttttagtgta ttcgatggat gacacggcta aagcgatcat cagcctattc
     6901 gggtatggtg gaactcctga tcgatgataa tagtgctttt gctttttcaa aaacaaattc
     6961 ggcggtaaag cgcgtaagac aatgtgtgtc tccatatttg catcgggcca taaaacaatt
     7021 gccgcacggc aggtccgaag aatcaagaaa aaaagtatgc gctccaagcg gtcgcgacca
     7081 gtcgcttcgg gatgatccga ataatgcaaa ggttggtatg cctgataccc aggcaaaatg
     7141 cataagcccg gaatcttctg ataaaacaaa gcctactttt tgaataatgg caaaggcctc
     7201 cgcgggattc gttttgccca caaggtttat gagtttgtct ccaaaaatat tttcgagata
     7261 acttgctttg tccgctataa gttcgacgcc caacattaaa aattgcgttt gaggaaagtc
//
LOCUS       DASQJI010000611         6370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_847613,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000611 DASQJI010000000
VERSION     DASQJI010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6370
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847613"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..1089
                     /locus_tag="VEV83_16680"
     CDS             64..1089
                     /locus_tag="VEV83_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46817.1"
                     /translation="MRYLLVLVLFVSVFHSDVFSQKKSPINRQQFFLDDSVIEATMTT
                     DLRNLRTAKTTPTWQPAQMKMHFSDSLVVNEEVAVEPRGIYRKTNCDFASLYVNFKNS
                     ASPILSPLKKLKLVSSCNAGKTNEEFLLKEYLAYKIYNLLSVMSFRVRLIHLTFVDSQ
                     KKIKSFTQYAFLIEDMKDMADRNNCKEIKTKHFSTEQTDRHQITFVSIFQYMIGNTDW
                     AVGNYHNIKLMVPKTDTLARPYPVPYDFDYAGLVNAPYAVPAEGLDITQVTERYYMGF
                     ARSIEEIQAIMDVFKEKKETIYLTINKFPWLSDRVKKEMTRYLDEFYAGTESKGAMKS
                     IFVDRAL"
     gene            1365..1922
                     /locus_tag="VEV83_16685"
     CDS             1365..1922
                     /locus_tag="VEV83_16685"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HYK46818.1"
                     /translation="MILWIIIGIVVILALWIIGMYNGFVKARIKIDNSWSDINVFLKK
                     RFDLIPNLVNTVKGYAAHESQTFEKVVQARNAAVSVPPNDVQGMAQANTVLTGALRGL
                     LAVAENYPQLKANENFLELQQALQNIEGDLSNARRYYNATVRDYNTSIQQFPGVVLAN
                     MTGFKPREFFELEDKSEARNVEVKF"
     gene            1933..3645
                     /locus_tag="VEV83_16690"
     CDS             1933..3645
                     /locus_tag="VEV83_16690"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HYK46819.1"
                     /translation="MKKLFALILTAILCCGATSAQEYFTIKQYDVHIIVNEDASLNID
                     ETINVHFTEPRHGIVRMIPFKYQLQSLPPGTEKANRQMESGGYAHTFIKDIKVDGWNY
                     DVSTEGDYKSIKIGSADELVDGDQRYVIHYRLLNAINFFNDHAELYFNVIGDKWETTI
                     DSVTFTVELYKSLTATPEYFVATGSYGSRENNTETNWTDNRIFSGHTTVRLNNYEAVT
                     LGIVLPKDLLTEQNYRLMGIGWLFLPGAVLLAMFMAWRKWGRDEKLTIQTEYYPPENI
                     SPSVSGYIIDDKLDKRDLTALVPYWGAGGYLKVEETEKKALLGLLKNKEYTFIKVKEL
                     PSTAMTFERTLFNGIFATGDRVKLSSLKDVLYKTMYTAKKELEKEVDKGAYYTKGSRG
                     LGCWFIFLSLGMIAFGIFSIVSGYENLWRGIALITSGIITVVFGALMTKKTEKGNKLY
                     AKLAGFKEFLRLVEKDRLREFLKQDENYFDKVLPYAIVFDIADKWKDKLEGLDIPPPQ
                     WYSGNYTTFSTLAFMNSLDNSMQQMSTTFYSAPSSSGSSGGSFSGGGGFSGGGFGGGG
                     GSSW"
     gene            4103..4483
                     /locus_tag="VEV83_16695"
     CDS             4103..4483
                     /locus_tag="VEV83_16695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK46820.1"
                     /translation="MFKVTKAFSSFSVDDLEKAREFYSGTLGVDVVKNDMGILELHIG
                     GDDRFIIYPKPNHQPATFTVLNFPVHNIEEAVDDLTAKGIAFERYDMPNIKTNEKGIA
                     DGGGGPKIAWFKDPAGNILSVLQE"
     gene            complement(4770..>6370)
                     /locus_tag="VEV83_16700"
     CDS             complement(4770..>6370)
                     /locus_tag="VEV83_16700"
                     /inference="COORDINATES: protein motif:HMM:NF026255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel family protein"
                     /protein_id="HYK46821.1"
                     /translation="SRTNLQQLRTSYHATTNDSDLLENYSEDNRDAKQIQTNGQAGID
                     YHLNKKTIVGALFSTNYRKWTMESLNDAFVTNNHQTDTVIDIVNNELHTTLYYGANLN
                     LQHDFGPDEKLTINGDYLYYKDKNPSTYLNNYYDGAGNFLFKENVESNKLTPLHFWIV
                     AADYSKKLSKNLDLEAGLKGTTSGLEDGIQVASFTRTEWITDTTLTGSHRLNESIGAA
                     YTSFSMKFSDKTSAKAGLRYEYSETSIESLTHGEKINRYFSEWFPSVFLLHAFNEKNS
                     LNFTYSRRIYRPSYSDFAPYVIFQDPKTFQTGNPSLQPGFIDNVSVSYTYKNKIISLS
                     YSYLNPTIVQQPQVDKLSNRMVTASANANSNEDVSVSLALPFTVTKWWSMQNNLYLDW
                     TQFNGFYEHPEKTENTNLFFNGAQNFTLPKNYSFSVSGYYSSGFAWGNYVFKSVGSID
                     AGVQKKFKNRSSLSLNIPNIVSSFNVMRMSGDVPSEDLIIKNKSTNSHTGVNLSFTHN
                     FGSDKVLQKRERTTGDEDEKSRAY"
BASE COUNT         1863 a         1269 c         1424 g         1814 t
ORIGIN      
        1 agggtgtaaa ctttccttta ttatatttgt gcaccttcag ctgcaaataa agccttgacg
       61 tttatgagat atttattggt ccttgtcctt tttgtgagtg tatttcattc cgatgtattt
      121 tctcaaaaga aatcgccaat aaaccgccag caattttttt tggatgacag tgtgattgaa
      181 gcaaccatga ccacggacct gcgaaacctg cggacggcga aaacaacacc tacctggcag
      241 cccgcacaga tgaagatgca tttttcagac agtttggtag taaacgaaga ggtggctgtg
      301 gaaccgagag gtatctatcg aaaaaccaac tgcgattttg cctcgctgta tgtcaatttc
      361 aaaaactcgg cctctcctat attgtctcca ctaaagaaat tgaagcttgt aagcagttgc
      421 aacgccggaa agacaaatga agaattcctg cttaaggaat atctcgcata taagatatat
      481 aatcttcttt ccgtgatgag ttttcgcgtg agactgatac atctcacttt cgtggatagc
      541 caaaagaaaa taaaatcttt tacgcagtac gcttttctca tcgaggacat gaaagacatg
      601 gccgacagga acaattgcaa agagataaag accaagcatt tttcaaccga gcaaactgac
      661 cggcaccaga taactttcgt aagtatattc caatatatga tcggtaatac cgactgggct
      721 gttggaaatt atcacaatat aaaactaatg gtacctaaaa cagacacgct tgccaggcca
      781 tacccggtcc catacgattt tgattacgca ggtcttgtaa acgcgcccta cgcggtaccc
      841 gccgaaggcc ttgatattac gcaggtgaca gaacgatatt acatgggatt tgcgaggagc
      901 attgaggaaa tccaggcgat catggacgta ttcaaagaaa aaaaagagac aatatatctc
      961 actatcaata aatttccctg gttaagcgat agggtgaaga aagaaatgac caggtatctc
     1021 gatgagtttt atgcgggcac cgaaagcaag ggtgccatga aatcaatctt tgttgacaga
     1081 gctctttaga agtttcaaac gttggaactg tttacttcga cgtcggaatt tatttgagcg
     1141 atctttgaaa ataagcattc gatcgtttcc ttgcatcagt gcattcagtt ttaaagagct
     1201 gtagccgaag ccatttcaat tggaacattt cgcccgtgcg agccttcatt cagctttgcc
     1261 tttaaccgtt gtcatatatt tagccattca cgtcctcgta tttcattaca ttgcacgaac
     1321 gcttgtcact acttctttaa ttcttttaaa cataaaaatt tactatgata ctgtggatca
     1381 tcatcggcat agtcgtaata ctggcacttt ggatcattgg tatgtacaat ggttttgtaa
     1441 aggcgcgaat aaaaattgac aatagttgga gtgatataaa tgtatttctc aaaaaacggt
     1501 ttgacttaat tccaaacctc gttaatacgg taaaaggtta tgcggcgcac gaaagccaga
     1561 cgtttgaaaa ggttgtgcag gcacgcaatg cggcggtcag tgttccgccg aacgacgtgc
     1621 agggaatggc gcaggccaat acagtattga ccggggcttt aagaggattg cttgcggtcg
     1681 ctgaaaatta cccgcaatta aaggcaaacg aaaacttcct cgaattacaa caggcattgc
     1741 aaaacatcga aggagatctt agcaatgcgc gtcgatatta caatgcaact gtaagagact
     1801 acaatacttc catccagcaa tttcccggcg tcgtgcttgc gaatatgacc ggttttaagc
     1861 cgcgtgagtt cttcgaactg gaagataaaa gcgaagcgag aaatgtagag gtgaagtttt
     1921 aaatcccacc cattgaaaaa gctttttgca ctcatactga ctgcaatttt atgctgtggc
     1981 gccacgtcgg cgcaggaata tttcactatt aaacaatacg acgtccacat catagttaac
     2041 gaggacgctt cgcttaatat tgatgaaacg atcaacgttc atttcaccga accaaggcat
     2101 ggcattgtcc gaatgatccc gttcaaatac cagctgcaat ctttaccgcc gggtacagaa
     2161 aaggcaaaca ggcaaatgga gtctggtgga tatgcacaca cgtttattaa ggacatcaaa
     2221 gtagacggat ggaattatga tgtaagcact gaaggcgatt acaagtcaat caagatcggt
     2281 tcagcggacg aactggttga tggtgatcag cggtatgtga tacattaccg tctcctgaac
     2341 gcgatcaact tttttaacga tcatgcagag ctatacttca acgtcattgg cgataaatgg
     2401 gaaactacta tcgactcggt aacttttaca gttgagcttt ataaaagcct cactgcaacg
     2461 cctgaatatt tcgtggcgac gggttcctac ggatcacggg agaacaatac agaaacgaac
     2521 tggacggaca acaggatatt ttcaggacat actacagtcc ggctcaacaa ctatgaggct
     2581 gttacgctgg gcattgtttt gccaaaagat cttttgactg aacagaacta ccgcttgatg
     2641 ggaattggct ggctgttttt gccgggggcg gttttactcg ctatgttcat ggcttggaga
     2701 aaatggggaa gggatgaaaa gctgaccatt caaacagaat actaccctcc tgaaaatatc
     2761 agtccaagtg tttccggtta catcatcgac gacaaacttg ataagagaga ccttacagca
     2821 ttagtgccat attggggagc gggtggctat ttgaaagtgg aagaaacgga aaagaaggcg
     2881 ctgcttggtc tgctgaaaaa caaagaatat actttcatta aagtaaaaga gcttccctcg
     2941 actgctatga cgtttgagag aacattattc aacggcattt tcgcaactgg ggatcgtgta
     3001 aaattaagtt ctttgaaaga tgttctttat aagacgatgt atacggcgaa aaaagaactg
     3061 gagaaagaag ttgataaggg tgcgtattat acgaagggct cgagaggttt gggctgctgg
     3121 tttatttttc tcagcctcgg tatgatcgcc tttggaatat tttcgatcgt ttccggttat
     3181 gaaaatcttt ggcgtggcat cgcgctcatc acaagtggta tcattactgt ggtcttcgga
     3241 gcattgatga cgaagaaaac agagaaggga aataaattgt acgcaaagct cgcaggcttt
     3301 aaggaatttt tacgattggt cgaaaaagac cggctacgcg aattcttaaa acaggatgaa
     3361 aattatttcg ataaagtttt gccttatgcg atcgtatttg atattgctga caaatggaaa
     3421 gataagcttg aagggcttga cattcctccg cctcaatggt actccggcaa ctacacaaca
     3481 ttttccacgc tggctttcat gaacagtctt gacaattcga tgcaacaaat gtcgacgact
     3541 ttttacagtg caccgagcag tagcggcagt agtggcggaa gttttagcgg aggtggcgga
     3601 ttttccggtg gcggttttgg tggcggagga gggagtagtt ggtgagcgga gaaaaaaatc
     3661 tccacagatc ccacagataa aatatttctg tgcgtatctg tgaaatctat gagagaaaaa
     3721 attttgaatt cacaactttt acgatcaaac tctaagaatc tctcacacat ttacacggat
     3781 aacacagata aaatatttct gtgcatatct gtgaaatctg tgagagaaaa agtttgaatt
     3841 cccaacttta caatcaaact ctaagaatct ctcacagatt tacaccgatg aacacagata
     3901 aaatatttct gtgcatatct gtggcaatct gtgagaaaaa actttccatt cacagctttt
     3961 acgatcgaac gataagaatc tctaacagat tacacagatg aacccagata aaatatttct
     4021 gtgcacgtca gtcctatctg tgagaaacaa atcttctggc agtttttttg ctgcaaaata
     4081 ttctccatta aaggcaaata acatgtttaa agtaacaaaa gctttcagca gtttttcagt
     4141 cgatgatctt gaaaaagcca gggagtttta cagcggaaca cttggtgtcg acgttgtgaa
     4201 aaatgatatg ggtatactgg aactgcatat cggtggcgac gaccgtttca taatctatcc
     4261 taaaccaaac catcagcctg caacctttac ggttctcaat tttccggttc acaatattga
     4321 agaggcagtt gacgatttaa cagcaaaagg cattgctttt gaacgatacg acatgcccaa
     4381 tattaaaacc aacgaaaaag gcatagctga cggcggcggg ggacctaaga tcgcgtggtt
     4441 caaggaccct gcaggcaata tattatcggt gctgcaagag tagcgattgg tcaagtaaat
     4501 acaaatagca aaatgtgaat cgtgtaaata aatgatgaag atgtagctcc atttggcgtg
     4561 tcatggttga gcagatgctc tttgttccca agaaaaatag gttgacaacc ttgcctggtt
     4621 gtcaacctat aaatgaaaca ttattcaacg ttactctttt tattttgcaa gccttgtcag
     4681 cttcagtttg aagggaacct ggtagtatcc ggcgccgatt gaattatcat ttccatctat
     4741 tgagtagttg gtagattttt accgatattt taatacgccc tgcttttttc atcttcatcg
     4801 ccggttgtcc gttcgcgctt ctgtaaaacc ttgtcacttc caaaattgtg cgtgaaggaa
     4861 agattgacgc ctgtgtgact gttcgtgctt ttatttttga taatgagatc ttctgagggc
     4921 acatctccag acatacgcat aacattaaat gaactcacga tgttggggat attgagtgat
     4981 agtgacgacc tgtttttaaa ttttttttgc acgcctgcgt caatcgaacc gaccgattta
     5041 aaaacatagt tgccccacgc gaacccggaa ctataatatc cggaaacact gaacgaataa
     5101 ttttttggca gtgtaaaatt ctgcgcgccg ttaaaaaaca ggttcgtatt ctctgttttt
     5161 tcaggatgtt catagaatcc gttgaactgc gtccagtcaa gatataagtt gttttgcata
     5221 ctccaccact ttgtaacagt aaaaggcaat gccaggctta cagagacatc ttcgttgctg
     5281 ttggcatttg ccgatgcggt aaccatccgg ttgcttaatt tgtcaacctg aggttgttgt
     5341 acaattgtgg gattgagata actgtaagag agcgaaatga ttttattttt atatgtatag
     5401 gatacgctca cattatcgat aaacccgggc tgcagggaag gattaccggt ttgaaaggtt
     5461 ttggggtcct ggaagatcac ataaggtgcg aagtcgctgt aactcggcct gtaaatgcgc
     5521 ctgctataag taaaattcag cgaatttttt tcgttgaagg cgtgcagcaa gaaaacgctc
     5581 ggaaaccatt cgctgaaata cctgttgatc ttttccccat gcgtaagcga ttcaatgctt
     5641 gtttcggagt attcgtagcg taaaccggct tttgccgagg tcttgtccga aaacttcatc
     5701 gagaaagaag tataggctgc accaatgctt tcgtttaaac ggtggcttcc ggtgagcgtg
     5761 gtatctgtta tccactcggt tcgggtgaat gacgcaacct gtatgccatc ttcgaggccg
     5821 gaagttgttc cttttagccc tgcttccagg tccaggtttt ttgagagctt tttcgagtaa
     5881 tcagccgcga cgatccaaaa atgtaacggc gtgagtttat tgctttctac attctctttg
     5941 aaaaggaaat tgccggcccc gtcgtaataa ttgttgagat aggtactcgg atttttatcc
     6001 ttgtaataaa gataatcgcc attgatcgtg agcttttcat ccggcccgaa atcatgttgc
     6061 aggttcaaat tagcgccgta atacaaggta gtatgcagtt cattgttgac aatgtcgatc
     6121 accgtgtctg tttgatgatt gtttgtgacg aaagcatcat tcaacgattc catcgtccac
     6181 ttgcgatagt tcgttgaaaa caacgcaccg acaattgttt tcttgttgag atgatagtca
     6241 attcctgcct gcccgttggt ttgaatttgt ttcgcatcgc gattgtcttc ggaataattt
     6301 tcaagcaggt cgctatcgtt tgtcgtcgca tgataactcg tccgcagttg ctggagattc
     6361 gtgcgtgaaa
//
LOCUS       DASQJI010000612         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1769029,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000612 DASQJI010000000
VERSION     DASQJI010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769029"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /gene="ftsY"
                     /locus_tag="VEV83_16705"
     CDS             complement(<1..801)
                     /gene="ftsY"
                     /locus_tag="VEV83_16705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HYK46822.1"
                     /translation="MGLFDKLFGKKEKETLNEGLQKTKEGFFAKVTKAIAGKSTVDEE
                     VLDNLEDALVSADVGIDTTIEIIQRIEARAAKDKYINTSELNKLLQEEIEDILTDAPE
                     QSYQEFDLPDDKKPYVMLVVGVNGVGKTTTIGKLAYNYKKAGKNVLLGAADTFRAAAV
                     DQLTIWSERVGVPIVKQPMGSDPAAVAYDAVKSAVTKKSDIVIIDTAGRLHNKAHLME
                     ELSKIKRVTQKVIPDAPHEVLLVLDGSTGQNALEQAKHFTAATDVTAIA"
     gene            911..>2451
                     /locus_tag="VEV83_16710"
     CDS             911..>2451
                     /locus_tag="VEV83_16710"
                     /inference="COORDINATES: protein motif:HMM:TIGR04534.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELWxxDGT repeat protein"
                     /protein_id="HYK46823.1"
                     /translation="MSVPKPLVFLCVALVASIQIFAQNQAIHQHKNFSTKKGSFNFTG
                     DGFSLSYDSTTGQCEILSSGFKPRQLAQTNEQRSAIEATTGLTYLVKDIDKDKDSYPQ
                     DNEFNTFNWYYAVLDNVIYFAADDGIHGSELWRSDGTDSGTYIVADINAGNEGSSPTN
                     IIVSGNKIFFAATTPSRGQELWVSDGTEAGTKLVRDILSQSQSSYPEAITNVNGIAYF
                     LVSLAHYHDQLWKSDGTQGGTTMVKDLYLNGLSGGIYQFTAANNLLFFTAGSASTGQE
                     LWRSDGSESGTFMVSDIDPGSGASYPAQLTFFNNRLYFSAFDGANRLLWETDGGSGGT
                     HPVSGNNNIQLPGGFTLPFVIGPFAISNNALCFMGYAASTGWELYKYSDSAGVVLVAD
                     ILPGTQGYYMSTSYRPEMADLAGSLFFRYKDSAANNYQLWTSTTSGTKKIRAFDNGSF
                     FNNLVNGKTVLYFIAFDSTYGTELWKSNGKTSGTVPIDVYPGSTSSNALYLTLVGNKL
                     FFSGAS"
BASE COUNT          619 a          555 c          539 g          738 t
ORIGIN      
        1 ggcgattgct gtcacatccg ttgctgccgt aaaatgtttc gcttgttcaa gggcattttg
       61 cccggttgaa ccatcaagca ccaacagcac ttcgtgcggt gcatcaggaa ttaccttctg
      121 tgtaacacgt ttgatcttcg aaagctcctc catgagatgc gccttattgt gcaaacgtcc
      181 cgcagtatcg atgatcacaa tgtcagattt tttagttaca gcgcttttca ccgcatcgta
      241 agccaccgct gcaggatcgc tgcccatagg ttgtttcacg atcggcacac ccactctttc
      301 actccagatc gttagctggt caaccgcagc ggcacgaaat gtatcggcag ctcctaacaa
      361 cacattctta cctgcctttt tataattgta agccagtttt ccaatagtcg tggttttacc
      421 aacgccgtta acgccgacga ccagcatcac gtaaggcttt ttgtcatccg gaagatcgaa
      481 ttcctggtat gattgttccg gtgcatcggt caatatatct tcaatttctt cctgcagtaa
      541 tttgttcagt tcgcttgtgt tgatgtattt atcttttgct gccctggctt cgatccgttg
      601 gatgatctcg atcgttgtgt cgatgccaac gtcagcactg accagcgcgt cctccaggtt
      661 atcgagcact tcttcgtcga cggtgctttt gcctgcgatc gcctttgtca cttttgcaaa
      721 aaaaccttcc tttgtttttt gcaaaccttc attcaaagtt tctttctctt ttttgccgaa
      781 taatttatcg aataagccca tgtttcttta ttgacacgcg aagttactgt tcaccgttct
      841 gattggaaac tattttgaat ctactgaggc ggtgcttatt tttgtttatt cttaacctaa
      901 aactattctt atgagcgtcc ctaaaccact cgtgttttta tgcgttgctt tagttgcaag
      961 catacaaatc ttcgcacaga atcaagcgat ccaccaacat aaaaactttt caacgaaaaa
     1021 aggatcgttc aattttaccg gcgacggttt ttcgctcagt tacgattcca caacaggtca
     1081 gtgtgaaatt ttgtcttccg gttttaaacc gcgacagctc gctcaaacga acgaacaacg
     1141 aagcgcaatt gaagctacta ccggcctgac ctatcttgtg aaagatatag acaaagacaa
     1201 ggatagttat cctcaggaca atgagttcaa cacatttaat tggtattatg ctgtgttgga
     1261 taacgtcatt tatttcgctg cggatgacgg tattcacggt tcagagttat ggcgttccga
     1321 tggtactgat tcaggtacgt acatcgtagc ggatatcaat gcgggcaatg aaggttcatc
     1381 tccaactaat atcattgttt ctgggaataa aatatttttt gcagcaacga ctccttcccg
     1441 tggtcaggaa ctttgggttt ctgatggtac cgaagccggg actaaactcg taagggatat
     1501 tctttcccaa agccaaagca gttatcctga ggctatcacg aatgtaaacg gtattgcata
     1561 ttttcttgtt tccttagccc actaccatga tcagttatgg aaaagcgatg gaactcaagg
     1621 cggcacaaca atggtaaagg atttgtacct gaatggactg tccggtggca tttaccagtt
     1681 cacagccgca aataatttac tattttttac cgcgggttca gcttcaaccg gacaggagtt
     1741 gtggagaagt gatggcagcg aatccggcac attcatggtt tctgacattg atccaggctc
     1801 tggcgcaagt tacccggctc aattgacgtt ttttaataac cggttatact tctcagcatt
     1861 tgacggtgcc aaccgcttgc tgtgggaaac tgatggtggg tcgggcggaa cgcatccagt
     1921 aagcgggaac aacaatatac agttgccggg aggttttaca ttgcccttcg ttatcggccc
     1981 ttttgctata agcaataacg cgctttgttt tatgggttac gcagcgtcaa ccgggtggga
     2041 attgtacaaa tactcagatt cagccggggt ggtattggtt gcggatatat tgccgggcac
     2101 gcaaggctat tacatgagta cttcttatcg acccgaaatg gctgatttgg cgggaagtct
     2161 tttttttcgg tacaaagaca gtgcagccaa caattaccag ttgtggactt caacaacaag
     2221 cggtacaaaa aagataagag catttgataa tggcagtttc tttaataacc tggttaatgg
     2281 caaaacggta ttgtacttta ttgctttcga tagtacctat ggaacggaat tatggaaaag
     2341 caacggcaaa acaagcggaa cagtaccgat agatgtttac ccgggttcta caagctccaa
     2401 cgcactttat ctaacgctgg ttgggaacaa gttgtttttt tccggagcct c
//
LOCUS       DASQJI010000613         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_539362,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000613 DASQJI010000000
VERSION     DASQJI010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539362"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VEV83_16715"
     CDS             <1..186
                     /locus_tag="VEV83_16715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46824.1"
                     /translation="GIYVYKQTDYYNEVYADLFHTIYHRWGLNYQMGRHWLIGLNLLA
                     HNQIADFIDGRLTYRIK"
     gene            complement(236..442)
                     /locus_tag="VEV83_16720"
     CDS             complement(236..442)
                     /locus_tag="VEV83_16720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46825.1"
                     /translation="MKKIMQMAVVCLLAISTTAYAGDGRKGTKSAADKASVTSCPPAC
                     KKTSCDTTSCNTQCTKQKCGMKKS"
     gene            474..782
                     /locus_tag="VEV83_16725"
     CDS             474..782
                     /locus_tag="VEV83_16725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46826.1"
                     /translation="MFEIFKHNWVVSIRGWSNLQAREFAGWNILWQKPLVRMTSCSIV
                     GPEKANTAGNPRILLSGYNRPDLKFAVAFVRRSHSASISFCNMHASQLFYFQNRQLEV
                     "
     gene            complement(896..>1715)
                     /locus_tag="VEV83_16730"
     CDS             complement(896..>1715)
                     /locus_tag="VEV83_16730"
                     /inference="COORDINATES: protein motif:HMM:NF019311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PA14 domain-containing protein"
                     /protein_id="HYK46827.1"
                     /translation="LEDLKKFFSNRIPKTNVFEGRNQIRITEWGPYDFRYPLLWLKNV
                     DSIGLYHFEVLIPTGDRQPRTEWKLKTAHGFDIIQTSKDQITVKADSSVVDRFIQIEY
                     SGAAFTDMFGKYQPANDAYAFEYSEFDPHFTWNIQFFKWDSLHDPQKSYSAFIQSLST
                     PFFSTTTSKVDYTWWSSIGKDLPADSFGTVATASVNLKEGSYVVGVTADDMVKLFVDG
                     REIIDAWDPSYTGLDENTHHDKKIHLAQGAHEFKIVQAEIGGLATLMFYFDRAP"
BASE COUNT          474 a          363 c          377 g          501 t
ORIGIN      
        1 ggaatatatg tgtacaaaca aacagattat tacaatgaag tgtacgccga tctgtttcat
       61 acgatctatc atcggtgggg gttgaattat caaatgggaa ggcattggct tattggtctt
      121 aatcttttag cccataatca aattgcagac ttcatagatg gccggctcac gtaccggatc
      181 aaatgaaaaa accttcccgg cacaccggga aggctttaat aaacgaatca cggcattatg
      241 atttcttcat gccgcatttt tgtttcgtgc attgcgtgtt gcacgacgtt gtatcgcaac
      301 tggttttttt gcacgccggt gggcacgaag taacggatgc cttatccgca gcgctttttg
      361 tgcctttacg accgtcgccg gcataagcag tcgtgcttat cgccaataga caaaccactg
      421 ccatttgcat tatctttttc atacaaaaat tttattgttt aaaaattaag aatgtgtttg
      481 aaatttttaa acacaattgg gtggtttcca ttcgcggttg gagtaatctg caagcgcgtg
      541 aatttgcagg atggaatatt ctttggcaaa agccgttggt gagaatgaca agttgttcaa
      601 ttgttggccc ggaaaaagcg aacacagcgg gcaatccgcg cattttgttg agtggttaca
      661 atcgcccgga tttgaagttt gctgttgctt ttgtgcgcag gtcccattct gcatcgattt
      721 cattttgcaa catgcatgcg tctcaacttt tttactttca aaacaggcag ttggaagttt
      781 gattgtttct ataacaaacg cgatcaacga aacgagcaat atgcaagccg aggtcttcac
      841 caaaacaaac ttaaaatttt aaacaagatc cggcttaaaa ttacacaagt ggtagtcatg
      901 gagcccggtc gaaataaaac atcagcgtcg ccaaaccgcc gatctcggcc tgcacgatct
      961 tgaattcgtg cgcaccttgt gcgaggtgaa ttttcttatc gtgatgcgtg ttctcatcga
     1021 ggccggtata cgaaggatcc caggcgtcga tgatctctct cccatcaaca aacagtttca
     1081 ccatatcgtc ggcagtaact ccaaccacat aactgccttc cttcaagtta accgacgcag
     1141 ttgccactgt gccaaaacta tcagcgggaa ggtcttttcc tatagaactc caccacgtgt
     1201 aatcaacttt agaagttgta gtcgaaaaaa acggcgtaga cagcgattga atgaaagctg
     1261 aatagctttt ttgcggatca tgtaacgaat cccatttgaa gaattgaata ttccaggtga
     1321 aatgcggatc aaattcgctg tattcaaaag cgtaagcatc atttgccggc tgatattttc
     1381 cgaacatatc agtgaaagca gcgccgctat attctatttg aatgaaccgg tcgacaacag
     1441 acgaatctgc tttcacggtg atttgatctt ttgatgtttg gatgatatcg aagccatgtg
     1501 cggttttgag tttccattcg gtccgcggtt gccggtcgcc ggttggtatt aaaacttcga
     1561 aatgatacaa gcctatactg tcaacatttt tcaaccataa taaagggtag cggaaatcgt
     1621 atggacccca ttccgtgatg cgaatttgat tgcggccttc aaaaacattg gttttaggaa
     1681 tgcggttgct aaagaatttt ttaagatctt caagc
//
LOCUS       DASQJI010000614         3840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_539655,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000614 DASQJI010000000
VERSION     DASQJI010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3840
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539655"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VEV83_16735"
     CDS             <1..346
                     /locus_tag="VEV83_16735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46828.1"
                     /translation="QTYLPPDAGKIQQIYAAGNATIQVLEPGKKFKLNFPDYNEKGDM
                     LSISVDKENQKIMALDVSTSVDDPAKKVVFNITYDDLPDATQYAGSTTLDAQAKSVKI
                     VIVNSGFKKAAG"
     gene            complement(832..1566)
                     /locus_tag="VEV83_16740"
     CDS             complement(832..1566)
                     /locus_tag="VEV83_16740"
                     /inference="COORDINATES: protein motif:HMM:NF039346.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46829.1"
                     /translation="MYKINEIAPDVYRISVFVPEIQLQFNHFLIKDDEPLLYHAGLKN
                     MFPLLLEAVKTLIDPKLLKWIGFSHFEVDECGGLNEWLHVAPNAQAVCSEVGAIVNMA
                     DFAVRPARAMKSNEILQTGKYNYRFIRTPHFPHGWDAGVMFEETNKTLLCSDIFHQNG
                     DLVALTDQDILEAHKSSMLFLETGPLMDYTPYNHKTKEILYNLAALQPKTLATMHGSS
                     YFGNCAKALINLDEILKEVWGEKLAK"
     gene            complement(1803..3248)
                     /locus_tag="VEV83_16745"
     CDS             complement(1803..3248)
                     /locus_tag="VEV83_16745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HYK46830.1"
                     /translation="MKKSVFIPALFIATICVAQHYEPNWESLNTRGIPSWFKEAKFGI
                     FIHWGVYAVPSYAPVIENSGESYAEWYWYRINEGNKYFKPFHDKNYGANFQYQQFESQ
                     FTASMFDPKQWADIFKRSGARYVVLTSKHHEGYCLWNSAEADRDWGRAWNAVTGTPHR
                     DLLGDLTNAVRDAGLKMGYYYSLYEWFDPLWKTDKPRFVNEHMLPQFKDLVTKYKPSI
                     IFSDGEWELTDTQWHSTELLAWLFNSSPVAKDVVVNDRWGSSTREKNNGCTYATSEYG
                     SGMSADVVWEENRGIGHSYGYNRNEQIDDYKSSHDLILMLVDIVSRGGNLLLDIGPTA
                     DGRIPVIMQQRLVDIGNWLAVNGEAIYGTSAWKKAAQWSEGKQPQKSDKSFMAGYDVA
                     KLIKPKQNEAHIEYFFTKKGNDLYCIVPAYTPQIRIHDLKISATTKATVLGGKIFSCK
                     QDGNDCVVDLSNAKPGEIPSEMFVVKVSGVL"
     gene            3562..>3840
                     /locus_tag="VEV83_16750"
     CDS             3562..>3840
                     /locus_tag="VEV83_16750"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HYK46831.1"
                     /translation="MKFIADVHLGKLAKLLRMLGFDTWYKNSATVVELIDVAAGENRI
                     LLTKNPALQTNPDLKLFIITNENPEIQLQQVLHHFNLKNFQPFSRCIVC"
BASE COUNT         1097 a          862 c          768 g         1113 t
ORIGIN      
        1 tcaaacatac ctgcctcctg atgcagggaa gatacagcag atatatgctg caggcaatgc
       61 aactatccag gtgctggaac ccggcaaaaa gtttaaatta aatttcccgg actataatga
      121 aaagggtgat atgctttcta tctctgttga taaagaaaat caaaagatca tggcattgga
      181 tgtcagcact tctgttgatg atcctgccaa gaaagtggtg ttcaatatca cctatgatga
      241 tcttccggat gccacgcaat atgccggttc aaccacactc gatgcccagg caaaaagcgt
      301 gaaaattgtt attgtgaatt cgggctttaa gaaagcagct ggctaaatgc ttcggatagc
      361 cgcaactctg agttgtgggt catgaacgag taagagaaac tccacacaag cgtcacgact
      421 taagctgcag ttaaagttta tacgccgagc atcgtcgctc acgaggacga tgcgatcatc
      481 tacgcatcgt ttctttgcag aagacgatgc ttgactaaat aattttttta atcacaaact
      541 aaaacgaatc tgtccgaatg aagtgtcacg acgtccttgc tgtgctaatt ccttttcaaa
      601 gaaacattcg cagaaggaaa agctgcatgc aaaagatcat gcgccaggga acgtcattgg
      661 actgggaaat gtgcacgaag gaacaagtcc gtttgctaag atagaaccat acctggaaca
      721 aagggagaaa gaaatccgta aattattttt attaaaccag ttttttattt tgcacgattt
      781 tttgtgatcg ggaatgctgg ttaaagaaaa aaggaagcca ttacctcaca tttattttgc
      841 taatttttca ccccatactt ctttcaatat ctcatctaag tttattaagg ctttagcgca
      901 attgccaaaa taagaagaac catgcatagt ggccaatgtc tttggctgta gagctgcaag
      961 gttgtaaaga atttcctttg tcttgtggtt gtaaggagta taatccataa gcgggcctgt
     1021 ttcaagaaac aacatagatg atttatgcgc ttccagaata tcctgatctg taagagcaac
     1081 caagtccccg ttttgatgaa atatatctga acaaagtaaa gtcttgttgg tttcttcaaa
     1141 cataacacct gcatcccacc catgaggaaa gtgaggtgtt cgtataaagc gataattata
     1201 ttttcctgtt tgtagtattt cattgctttt catggctcgg gcaggacgaa ccgcaaagtc
     1261 ggccatatta acaatagcgc ccacctcact gcaaacagct tgcgcattag gtgctacatg
     1321 gagccattca tttaacccgc cgcattcatc cacttcaaaa tgactaaaac ctatccattt
     1381 gagtaattta ggatcgatca aagtcttcac cgcttccagt aaaagaggaa acatattttt
     1441 taaacctgca tgataaagta acggctcatc atctttaata agaaagtgat tgaactgtaa
     1501 ttgtatttca ggcacaaaca ctgagatacg ataaacgtca ggcgcgattt cattgatttt
     1561 gtacatacgc agaatttaat tattcaaccg ttagggttgt caatatttga aaaaataaat
     1621 ttaggaattt tgtgtttaac agcgtctttc aacgaggacg atgcttgact agaaaatttt
     1681 tgcattcact gcgccttctt taactcatag tttttttctg ctatgtaaat actgcagcct
     1741 gtattataaa aaatctggtt caatattata acatttcctc tttcgacgaa tacactgaca
     1801 aatcaaagca ccccactcac cttcaccaca aacatctcac ttggtatctc accgggcttc
     1861 gcgttcgaga gatcaaccac gcaatcattt ccatcttgtt tgcaggaaaa tattttacca
     1921 ccgagcacag ttgcttttgt agttgctgaa attttcaagt cgtgtatgcg aatctgcggc
     1981 gtgtatgcgg gaacaatgca atagagatcg ttgccttttt tcgtgaagaa atattcaatg
     2041 tgcgcttcgt tttgttttgg cttgatcagt tttgcaacat catagcctgc cataaaactc
     2101 ttatcactct tctgcggttg cttcccttcg ctccattgag ccgctttctt ccaggcactc
     2161 gttccataga tcgcttcacc gttaaccgca agccagttgc cgatatcgac caggcgctgc
     2221 tgcatgatca caggaatgcg accatcggcc gtaggaccaa tatcgagcaa caagtttcca
     2281 cctcgcgaaa caatatcgac gagcatgagg atgagatcat gactgctttt gtaatcatcg
     2341 atctgctcat tgcgattgta tccatacgaa tgaccaatgc cgcgattctc ctcccacaca
     2401 acatcagcgc tcatgccact gccatattct gatgttgcat acgtgcatcc attatttttt
     2461 tcgcgtgtgc tgctgcccca gcgatcattc acgacaacat cctttgcaac aggcgacgaa
     2521 ttgaacaacc acgcgagcaa ttccgtactg tgccattgtg tgtctgtcag ttcccattca
     2581 ccatcggaga aaatgatgga aggtttatat tttgtaacaa ggtctttgaa ttgtgggagc
     2641 atgtgttcat tcacaaaacg tggcttatct gttttccaca aaggatcgaa ccattcataa
     2701 agtgaatagt aataacccat tttcagacct gcgtcacgga cagcatttgt aaggtctcct
     2761 aaaagatcgc ggtgcggtgt tccggttacg gcgttccatg cacgtcccca gtcgcgatcc
     2821 gcttctgcgc tgttccataa acaataacct tcatgatgtt tcgacgtcag cacaacgtac
     2881 ctggcccccg atcttttaaa aatatccgcc cactgtttcg gatcgaacat gcttgcagtg
     2941 aattgcgatt caaattgctg gtattgaaaa ttggcgccgt aatttttatc gtgaaacggt
     3001 ttaaagtatt tgttgccttc attgatcctg taccaatacc attccgcata actctcacca
     3061 ctgttctcga tcaccggcgc atacgaaggc actgcataca caccccagtg aatgaagatg
     3121 ccgaactttg cttctttgaa ccacgacgga attcccctcg tgttgagcga ttcccagttg
     3181 ggttcataat gctgtgcgac acaaatcgtt gctatgaaaa gcgctggaat gaagacggac
     3241 tttttcatga tagaaagata tggaagtttg aggttttaag tttgaagttt gatgttcgag
     3301 tttgacgttt gaggtggtta actcgtagtg agttatttgt tgtgctacta ccaattacaa
     3361 cccccgcatt tttggatcac ggcgaatgcg cgggcacaac gaacacaacg ctaactgaac
     3421 aagccttaca ttgttggttg tccctttact gttcgccaaa aacctgaaca tttgctgata
     3481 agctcacatc gggaacagct tgaaattagt tgtgaccttc gtgtcgcgga gcattgacaa
     3541 ttcacctttg accattcaca aatgaaattc atcgctgacg tgcatctagg aaaactcgca
     3601 aagctcctgc gcatgcttgg ctttgacacg tggtataaaa attctgccac agttgtggaa
     3661 cttatcgacg ttgcggccgg agagaacagg attcttctta caaaaaatcc ggcgcttcaa
     3721 acgaacccgg atctcaaact ttttatcatc actaacgaaa atccggaaat acaacttcaa
     3781 caagttcttc atcatttcaa tctcaaaaac tttcagccat tttcaagatg tattgtgtgc
//
LOCUS       DASQJI010000615         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1923131,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000615 DASQJI010000000
VERSION     DASQJI010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923131"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /locus_tag="VEV83_16755"
     CDS             <1..1173
                     /locus_tag="VEV83_16755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HYK46832.1"
                     /translation="PSKSLTRACMEIKYNSNYPSIEDLRKKAQRKIPRFAFEYLDGGC
                     NEDVNLHKNTSEIRQIELKPYYLKKYTTADLRTELFGNVYDAPFGIAPVGLQGLMWPN
                     APEILARAAFDHNIPFILSTVTTSSIERISELTEGKAWFQLYHPAEEQIRDSILNRVA
                     AAHYPVLVVLSDVPTFGYRPREIRNGLAMPPKMTLKNILQIMGRPEWALKTLFHGQPA
                     FETMKPYMPKGMNMRQLGLFMNKTFSGRLNEERIKPIRDQWKGKLVLKGIASEEDTEM
                     AVRLGFDGIIVSNHGGRQLDAGQSAIRSLLPIVNKYKDKIAIAMDSGIRSGPDIARTL
                     ACGADFTFLGRSFMYGVAALGHEGGNHTISILKTQLRQVLEQLCCASVKDLPKHLI"
     gene            1412..>2106
                     /locus_tag="VEV83_16760"
     CDS             1412..>2106
                     /locus_tag="VEV83_16760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015153 - rhamnose transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008645 - hexose transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HYK46833.1"
                     /translation="MQVILGIIFHFIGGFASGSFYVPYKKVKGWHWESYWIVGGLFSW
                     LIVPPIAAWLTVPHFTEIISQTPSSTFWWTYFWGVLWGIGGLMYGLGMRYLGMSLGNS
                     VLLGFTSAFGALVPSIYYNFHPQPGKTTFNDLLTTSWGRIVLVGVALCLLGIYICGRA
                     GVMKERELSDEKKKESVKEFNLVKGLIVCIISGILSACFNYGIEAGSKMAEVANDMWK
                     SANPNETVNFLYR"
BASE COUNT          592 a          416 c          542 g          556 t
ORIGIN      
        1 ccatcaaagt ctttaacgcg tgcatgcatg gaaataaaat ataacagcaa ttatccatcg
       61 attgaagact tgcgaaaaaa agcgcaacga aaaattccgc gttttgcttt tgaatattta
      121 gatggcggct gcaacgaaga cgtaaacctt cataagaata caagtgaaat acggcagatc
      181 gaactgaagc cgtactattt aaagaagtat accaccgctg atctccgcac agaacttttc
      241 ggaaacgttt acgacgcacc gtttggcatt gcgccggtcg ggctgcaagg gcttatgtgg
      301 ccaaatgcac ctgaaatact tgctagggcc gccttcgatc acaacattcc tttcatttta
      361 agcacggtaa caacgtcgtc aatcgaaagg atcagcgagc tcacggaagg caaagcatgg
      421 ttccagttat atcatccggc ggaggagcaa ataagagaca gtatactgaa ccgggtggcg
      481 gcagcccatt atcctgtgct cgtcgttctt tccgatgtgc ctacattcgg ctaccggccg
      541 cgtgaaataa gaaatggttt ggcgatgccg ccgaaaatga ccttgaaaaa cattttgcag
      601 atcatgggca ggccggagtg ggctttaaaa acgttgtttc atggacaacc cgcgtttgaa
      661 acgatgaaac cgtatatgcc gaaaggaatg aacatgagac aactcgggtt atttatgaac
      721 aaaacatttt caggcaggtt gaatgaagaa aggataaagc cgatcagaga tcagtggaaa
      781 ggcaaactgg tgttgaaagg aattgccagc gaagaagata cggagatggc ggtcaggctg
      841 gggttcgacg ggattattgt gtcgaatcat ggcggcaggc aattggatgc aggccaatcg
      901 gcgatcaggt cgttattgcc aatcgtaaat aaatacaaag acaagatcgc cattgcaatg
      961 gatagtggca ttcgttctgg tccggatatc gcacgcacgt tagcgtgtgg cgcggatttt
     1021 actttcctgg gcagatcgtt catgtatggt gttgcagcat tgggtcacga aggaggcaat
     1081 catacgatct ctattttgaa gacgcaactg aggcaggtgc tggaacagtt atgttgtgcg
     1141 tcggtaaaag atctgcctaa gcatttaatt tgatctggcg gcgaaagttt ttttcatgac
     1201 agaccatgac ggtcgggaac cgtttgcaaa atatttttac aaaaagggaa accacatagg
     1261 cacatagggc acaatagaaa gaacacatag ttatgcgggc atgtttctgt gttcctttgc
     1321 tgcagtgtca gacaagtggt ggttcaaaag ttgttcaaat agttagtcgt cttttaaaaa
     1381 ttgcaattgc catttcgaaa aatcttagca gatgcaggtc atactcggaa tcatatttca
     1441 tttcatcgga ggttttgctt caggcagttt ttatgtaccg tataaaaaag taaagggatg
     1501 gcattgggaa agctactgga tcgttggcgg attattttca tggctgatcg ttccgccaat
     1561 tgctgcatgg cttaccgtgc ctcatttcac ggagatcatt tctcaaaccc cttcgtcaac
     1621 tttttggtgg acgtattttt ggggtgtact atggggaatt ggcggtttga tgtacggact
     1681 cggcatgcgt taccttggga tgtcgcttgg aaattcggtg ctgcttggtt ttacgtctgc
     1741 gtttggtgcg ctggtgccgt cgatttatta caactttcat ccgcagccgg gcaaaacaac
     1801 attcaacgat ctgctcacaa cttcatgggg acgaattgtg ctcgttggag ttgcattatg
     1861 cctgcttgga atttacatct gcggcagagc cggcgtgatg aaagaaagag aattatccga
     1921 tgaaaagaag aaggaaagcg taaaagaatt caaccttgta aaaggattga tcgtttgtat
     1981 catttcgggc attctcagcg catgttttaa ttatggaatt gaggctgggt caaagatggc
     2041 agaagttgcc aatgacatgt ggaagtcggc aaacccgaat gaaaccgtca acttcctgta
     2101 ccgcaa
//
LOCUS       DASQJI010000616        14766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_387841,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000616 DASQJI010000000
VERSION     DASQJI010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14766
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387841"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VEV83_16765"
     CDS             <1..429
                     /locus_tag="VEV83_16765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46834.1"
                     /translation="IPQDIGRVLLNLYNNAFYAVSEKLAAQGSLLTAQDSELEAKDRR
                     YLPAVTLVTKKSSNKIEITIKDNGPGIPQNIVDKIFQPFFTTKPTGNGTGLGLSLSYD
                     IIKAHGGEIKVETLSATPAAQARKESEGSAFIIKLPITEL"
     gene            426..2396
                     /locus_tag="VEV83_16770"
     CDS             426..2396
                     /locus_tag="VEV83_16770"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46835.1"
                     /translation="MKQKFFAFLLIFLSALNTNAQNVDSMKHALTLSKEDTNKVWTLY
                     SLYHYYKNAYPDSALPYIQESYQLSNKMKYDAGIRYSLLELSDVAEDLNNYKQALNYN
                     LMALPLFVKMKDTSGLGFALTHIGNTYSELHDFKNSLLYYNKALNIMTAFTDTEHLVL
                     YFYAGISGIYEQNNQLDSALYYAKKAYQLKPDYAYGLEKMAIAYGRLGNGDLALEFYK
                     KSILPALSDNERGDLVNIYNGIAEIYKARGDIDSATVNAKRALSYDPGSLKAAGILVD
                     IYESVKNKDSTLKYLKLTTALKDDLFTHEKDKLGILENITYNEGIKAKDAEAAHLRSQ
                     NNLKLMLLLAGLLAAIIIAVILVRSNRQKAKANVILQQQKEKVESTLSELKSTQQQLI
                     QSEKMASLGELTAGIAHEIQNPLNFVNNFSEINGELVDDLKAQLAIGNLQLATEIADD
                     LKENENKILHHGKRADAIVKGMLQHTRTSTSLKEPTNINALADEYLRLSYHGMRARDK
                     DFNATLQTDFDSTIGNVNVIPQDIGRVLLNLFNNAFYAVSQKVTAQRASDPVIRAGSH
                     RRATNGPYVPTVAVVTKKSSNKIEITIKDNGAGIPQNIVDKIFQPFFTTKPTGEGTGL
                     GLSLSYDMVKAHGGEIKVDTTEGEGSEFTIQL"
     gene            2782..8169
                     /locus_tag="VEV83_16775"
     CDS             2782..8169
                     /locus_tag="VEV83_16775"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46836.1"
                     /translation="MENAQEAETRIQELRKELVEKDRELEIQAALEKVRSRSMTMHGT
                     DELSDVLSVLFEQFDVLGISPLYTFLSLVDLEKNLVTYRQTGKGGAKVSGEIQFPLDS
                     MAEWEDIVRRMKDGNIHSVICTHYPIETFPKIWEVFGEIFDALPEGSKVFPEDFPNGI
                     FTVLGYCKYGFIGYDHDREWTEEDKSIVQRFGIEFTRLYQRFLDLQKAEAQAREAQIQ
                     LSLERVRARAMAMQRSDELSELVDTVFKELTKLDFALTWCIINIIDEASMTNVVWAAN
                     PDIHKSADRYHMKFEDYPFHNAMMKGWKERKTKYVYVLDGLEKKIYDEYLFTDTEFRK
                     VPEAAQAASRAMEKYVVSFSFSNFGGLQTVGDVPLSDASLDILSRFGKVFDLTYTRFN
                     DLKQAEEQAREAQIQLAMERVRARTMAMQKSDELAEAANLLFLQVQSLGMPAWSAGYC
                     IWDDEDKRSITLSMSSEGVLQPSLRMPLTEDRSLMHFREAYQRGESFFVEEVGGEELK
                     RHYSYLRTLPGVKETLDDIEAAGFPVPAFQIFHLAYFSKGFLLFITYDPVPEAHNIFK
                     RFAKVFEQTYTRFLDLQKVEAQAREAKIEAALEKVRSRTMAMQGSEELSDAASLLFKQ
                     IAGLGTRQWSSGFDIWNANEVSAVAWMSNPDGSIGVPFTVPYTTDPFFKQIYEARERG
                     EDFFVMESSGKELEETYQYLFNLPEAKKHFDGIGSLGFQMPEFQITHCAFFSQGYLMF
                     ITFEAAPEMWDIFKRFAKVFEQTYTRFLDLQKAEAQAREARIEAVLERIRSRTMAMQK
                     SDELTDVAGLLFKQVTDIGIKTWTAGFNVWSEDNNSYVDYITSPNGGFIEPYTVYTDT
                     AEALTDISNARKSGVEFDVQYVEGEKIKQLYLALTRLDEKQYEIMLQDGIRFPSHQYE
                     HFVFGSKVSLMFITYEPVPEAHDIFKRLGKVFEQTYTRFLDLQRAEAQAREAQIEAAL
                     ERVRGKAMAMHSSEDLAATIQLFYHELVGLSSVPVIRCGVGLLSKENYIGDISFISKT
                     SEGNLAEVKGKMDMAGHSMTKEIYENWLIQKEIHFVLRGNEIKEYYQYMRGQVAIPDY
                     PVDATQYLYFPMFNEGSFYVVTENQLSQEDIQTYRRFVSVLSLTYKRYNDLQTAEAQA
                     REAQIEAALERVRSRSMGMQKSDELREVIQVIYEQLIQLNFNIDFAGFAMDYRDSNDW
                     NLWAADSTLSYPEKIHIPYLDHSQFNRFIEAKEKGFDFQVNNLTFDEKNKLWDHFLKY
                     VPAPRPEIKNWLYKSAGLATSWVLLKDVTLYVCNTAGIPFSDSENPVLKRFGHVFEQT
                     YTRFNDLKKAEAQALEAVKRASVDRVRAEIASMRTTKDLERITPLIWNELTTLGVPFI
                     RCGVFIMDDEQQQVQSFLSTPDGKAIAAFRQPYAAPGEISDIVHSWHKKEIYKQHWNE
                     ARFIEFTQNLVKEGAVTSGEKYLIENRPTDLYLHFLPFLQGMLYAGNTSPLSDDELQL
                     MQDLADAFSTAYARYEDFNKLESAKVQIEKTLFDLKQAQAQLVQSEKMASLGELTAGI
                     AHEIQNPLNFVNNFSEVNGELINELVDEVDKGNYDEVRLIAVSLKDNEEKIIHHGKRA
                     DAIVKGMLQHTRTSAGQKEPTDINALSDEYIRLSYHGMRARDKDFNAEIKTDFDPTIG
                     KINIVPQDMGRVLLNLYNNAFYAVSQKLAAQGSQLEADNRRYVPTVTLVTKQYDAKIS
                     ISVKDNGPGIPQNIFDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGGEIRVETREGE
                     GTQFIIQLLTT"
     gene            8409..11789
                     /locus_tag="VEV83_16780"
     CDS             8409..11789
                     /locus_tag="VEV83_16780"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK46837.1"
                     /translation="MSKSVFLLLLISISTFSENLCAQKIFHKIDLGDNAGGITGIIQD
                     RLGYIWFAAQGKGLIKYDGSRFIAYTHNENDTNSIAGILLEALALDSSGNIWIGTNGN
                     GMDMLDPSTSIFRHFRHRANDPGSISHDTVDAILEDHLGNLWIGTVRGLDRYDRNTGK
                     FIHYTHNDNDANSLSGTHVRVLYEDREGNLWVGCGSPFPNEESWKDEGGLNRFDRTTG
                     KFTRYLHNSDDPASIANNKVRALLEDSKGNFWVGTAGDGLQTLNRKTGKFIHYYYDST
                     HPHNLSRGVVDTTSIDQVQFIKEDIKGKVWIGVLHQGIFEYDLQTKKTTHHGYIVIGQ
                     KLITADTLTGFNDNSAWSALTTKDGLTWIGTLFSAGLYKIDFNKNVFLTYEKSPSANA
                     FYKSADGTLWIATGNGMVRKDGKTGNQRIFVHDSNNSNSLSNNVVTDIKPDWGGNLWI
                     GTLGGGLDEFNLVTNQFTHINTNVHSATGRDSIGILYPDVAGNLWIGTVTAGLIKRDK
                     TTGKLFHFMHDSNDTNSVAGNGIISITGNKKNLWVSTQAGLDKLEMASGKLTHYLHGI
                     QASGVVIDGKGIVWAGTSNGLYEYDTGKNSFILFNDPAVQIGRVISLNADKNDNIWIS
                     SGTSIFLLKSDRKHIIMYANNNLHAAGWISNNDYISEDGEVFVGDVTGYYRFYADSVQ
                     QEVYAPQLNFASLQIGGAEVKSGSGILNKALSITEELKIPDNKNSFSIAFSAIDYRTS
                     GEKKVVYMLENYDNQWHQTASDQTAYFYNLPVGHYTLRARAVNAQGAWMEKSLSIIVT
                     PPWWQTWWAITILVVVFIGVIVGFSYYRSYSLQKENKVLEEKVKHRTTQLQRSLEELR
                     TTQTQLIQSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNGELINELVDEVDRGNLDE
                     VRLIAVSLKDNEKKIMHHGKRADAIVKGMLQHSRTSTSQKERTDINALCDEYLRLSYH
                     GMRAKEKNFNATLHTDFDSSIGKINIIPQDIGRVLLNLINNAFYAVSQKLATHSSQLA
                     AGNGNYVPSVTIVTKKLDDKIEISVKDNGPGIPQNIVDKIFQPFFTTKPTGQGTGLGL
                     SLSYDIIKAHGGEMSAGSGAKAETKEGEGSEFIIVLPA"
     gene            12033..13976
                     /locus_tag="VEV83_16785"
     CDS             12033..13976
                     /locus_tag="VEV83_16785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK46838.1"
                     /translation="MKDDTSRVLILSDLSFYILFFNADSGLIYADRAIDLAEKTNFVR
                     GKVRALAAKASLLETKGDLPAALQLSFAALELAEQQKLLLETSMCLTVTANIFYDLND
                     YTRAIGFYRRALPINEVVKNQIGARSWKYQTDVNLGTAFMLNNQNDSSFAYLSKAYKE
                     TFKDDVWHPVFSMFFGALEFRMGHRETGINYLIESLQLFKDDTPYSLSDVCRMLSRCY
                     SDMNMPDSAIHFAEKGLAAAQSIGYKTTILETSRLLSELYEPKDLKTALYYRKIYDTT
                     NNILYGTNKVRDLQKTLLNEQDRQRKIEAENVAYQNRVKQYGLLGGLFIILLVAFILY
                     RNNLQRKKSNVILSHQKEQLELTLKELKSTQSQLIQSEKMASLGELTAGIAHEIQNPL
                     NFVNNFSEVNGELVDELKAQLATGNLQLATEIADDLKDNESKILYHGKRADAIVKGML
                     QHSRTSAGQKEPTDINALADEYLCLSYHGMRARDKDFNAEIKTSFDTTIGKINIVPQD
                     IGRVLLNLYNNAFYATADKLKGQSSQLAAQASPLEATSSPYVPTVTVITKKYDAKISI
                     SVKDNGPGIPQNIVDKIFQPFFTTKPTGDGTGLGLSLSYDIIKAHGGEIKVETLSAAA
                     AAQAGKEGEGTEFIIQLPLLSGS"
     gene            14051..>14766
                     /locus_tag="VEV83_16790"
     CDS             14051..>14766
                     /locus_tag="VEV83_16790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015333 - peptide:proton symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide:H+ symporter"
                     /protein_id="HYK46839.1"
                     /translation="MESIALAPILKEETDKHPKEMYRVAFTTMWDMFSFYGMKALLIA
                     YIVTQLRLGQPMGYAILGTYAALVFGFNFFGGMVADKFLGTRKAIIWGGYLQITGHLI
                     LAIPSDLPFFAGLALVATGAGFRNGPSGSFVGSFYSNDKSRKKDSGYALYYMIFNMGA
                     ALGGLICGYLGQNINWHLGFGAACIFMIIGQAQFMAGINNSHGVPPDIKKLKEKVFIK
                     LLDRETIIYLLSLVVVAMVT"
BASE COUNT         4798 a         2869 c         3244 g         3855 t
ORIGIN      
        1 ataccacagg acattggaag ggtgctattg aacttataca acaatgcatt ctacgcggta
       61 agcgaaaagc tcgccgctca aggctcactg ctcacggctc aagactcaga gctcgaagct
      121 aaggataggc gctacctccc cgccgtcact cttgtcacga aaaaaagtag caacaagatt
      181 gaaataacta taaaagacaa cggccccggc attcctcaaa acatcgttga taaaatcttc
      241 cagcccttct tcaccactaa accaaccggg aatggaacag gcttaggctt gagtttaagc
      301 tatgatatta taaaagcaca tggaggggag ataaaagtgg agacgctgtc tgccacaccg
      361 gcagcgcagg cacggaaaga aagtgaaggc agtgcgttta ttatcaaatt gccaataacc
      421 gaactatgaa acaaaaattc tttgcgtttt tattaatatt tctttcagca cttaatacaa
      481 atgcacagaa tgtagatagc atgaaacatg cactaactct ttcgaaagaa gacacaaata
      541 aagtctggac attatactca ctttaccatt attacaaaaa cgcttatcca gacagtgctt
      601 tgccttatat acaagagtca tatcagctaa gtaacaagat gaaatatgat gcagggattc
      661 gatattccct gttagaatta agtgacgtgg ctgaagattt gaataattat aaacaggcgt
      721 taaattataa tttaatggca ttgcctttat ttgttaagat gaaagacaca tcaggtcttg
      781 gttttgcact tacccacatc ggtaatacct atagcgagtt acatgatttt aagaacagcc
      841 tgttgtatta caacaaggct ttaaacatca tgactgcttt taccgataca gagcacctgg
      901 tcctctattt ttatgcaggt attagcggga tttatgagca aaacaatcaa ttggattctg
      961 cattatacta cgcaaagaaa gcgtaccagt taaagcctga ttatgcttat ggtttagaaa
     1021 aaatggctat cgcttatggc aggttgggga atggcgacct ggctttagaa ttctataaaa
     1081 aatctatatt gcctgcttta agtgacaatg aaaggggaga ccttgtaaat atatataacg
     1141 gtattgcaga aatttacaaa gcaagaggcg atattgattc agcaactgta aacgccaaaa
     1201 gagctttgtc ctacgatcca gggtcgctta aagcagcagg aatactggtt gatatttatg
     1261 aatcagttaa gaataaagac agtactttaa aatatctcaa gcttacaacc gccttaaagg
     1321 atgatctttt tacccatgaa aaagacaagt tagggattct cgaaaacatt acatacaatg
     1381 aaggtataaa ggctaaggat gcagaagcgg cacaccttag gagccaaaat aatttaaaac
     1441 ttatgttgtt gctggcgggg cttcttgccg caattattat agcagttatt ttggtgagaa
     1501 gtaacaggca gaaagcaaaa gcaaatgtca ttctgcaaca gcaaaaagaa aaagtggaaa
     1561 gcaccttgtc agagctaaaa tcaactcaac agcaactcat acaaagtgag aagatggctt
     1621 cgcttggaga actcaccgct ggcatcgcac acgagattca aaacccgttg aatttcgtaa
     1681 acaatttttc tgaaataaat ggagaactgg ttgatgacct gaaagcacaa ctggcaatcg
     1741 gcaacctgca acttgcaacc gaaattgccg atgatctcaa agagaatgaa aacaaaattc
     1801 ttcaccacgg caaacgtgcg gatgccatcg tgaaagggat gctgcaacat actcgcacaa
     1861 gcacaagcct aaaagagcca accaatatca atgcattggc agatgagtat ctgcgcctgt
     1921 cttatcacgg catgcgcgca agagataaag atttcaacgc aacacttcaa acagattttg
     1981 attcaacgat cggaaatgta aatgtaatac cgcaggacat tggaagggtg ttgttgaatt
     2041 tatttaataa tgctttttat gcggtaagcc aaaaggtcac cgctcaacgc gcgtccgacc
     2101 cggtcatccg ggcgggctca caccgcagag caactaacgg gccttacgtg cctaccgtcg
     2161 ctgttgtcac aaaaaaaagt agtaacaaga ttgaaataac tataaaagac aacggcgcgg
     2221 gcattcctca aaacatcgtc gataagatct ttcaaccatt ctttaccaca aaacccacgg
     2281 gcgaaggaac agggttgggt ttgagtttaa gttatgatat ggtaaaagcg cacgggggtg
     2341 aaataaaagt ggacacgaca gagggggagg ggagtgagtt tacaattcag ttgtaaaaat
     2401 atctggtaat gtattgagca agctgacgac gaagctcaaa aatcgtgatc cggtggaaaa
     2461 agtggaagcg aagcaaggcg cagggagtga atttgttatt cggctaccaa ttgtctgaag
     2521 cggaattatc ctgacatgca tcattaagca ttaagctgat gtgacttgca tgctggattc
     2581 atgaatatcc tgaaaccaac aaacgccggg gcgctggccc tggaccggaa ggaaaccgat
     2641 tcattatttc attaacgctt tgcttagcgt atattgtacc cgggaccctt cgttcaaacg
     2701 ggaacaaaat atccgctgca acctaaaaaa tcaataccaa aacgttttac tgtatcacgt
     2761 atttaatata ctctcttatt tatggaaaac gctcaggagg cagagactcg catccaggaa
     2821 cttcgaaaag aactcgtgga aaaagatcgc gagctggaaa tacaagccgc tctggaaaaa
     2881 gtgcgctcaa gaagtatgac gatgcacggc accgatgaat tatcagatgt gctgtcagtg
     2941 ttatttgagc agttcgatgt gttaggtatc tcaccgctat acaccttcct gagtttggtt
     3001 gatttagaaa aaaacctggt tacgtatcgg caaaccggta aaggaggcgc aaaagtgtca
     3061 ggcgaaattc aatttccgct tgattcaatg gctgagtggg aagacatagt gcgccgcatg
     3121 aaggacggca acattcattc agttatctgc actcattatc ccattgaaac cttccctaaa
     3181 atttgggaag tgttcggtga aatttttgat gcgcttcctg aaggttcgaa agtgtttccg
     3241 gaagattttc caaacggaat attcaccgtg ctaggctact gcaaatacgg ctttatcggc
     3301 tatgaccacg atcgcgagtg gaccgaagaa gataaaagta ttgtacagcg atttggtatc
     3361 gaattcacac gcttgtatca gcggtttctg gatcttcaaa aagccgaagc acaggcaaga
     3421 gaagcacaaa ttcagctttc cctcgaaaga gttcgggcaa gggcaatggc tatgcagagg
     3481 tctgatgagt tatctgaatt agtcgacact gttttcaaag aattaaccaa gcttgatttt
     3541 gcattaacct ggtgcatcat taatatcata gatgaagcct cgatgacaaa cgtggtttgg
     3601 gcagcaaacc cggacattca taaatcggcg gatcgttatc acatgaagtt tgaagattat
     3661 ccttttcaca atgcgatgat gaaaggatgg aaggaacgaa agacaaaata tgtgtatgta
     3721 ctcgatggtc ttgaaaaaaa aatttacgac gaatatttat ttactgacac agaattcaga
     3781 aaggttcctg aagcagcgca ggcagcatcg cgtgctatgg agaaatatgt tgtttctttt
     3841 tcattcagca atttcggagg actgcaaact gttggagacg ttccactatc agatgccagt
     3901 ctcgatatac tcagccggtt cggaaaggtt ttcgatctta cctacacccg cttcaatgat
     3961 ctgaaacagg ccgaagaaca ggcaagggaa gcgcaaatac aactcgcaat ggaaagagtt
     4021 cgtgcaagaa cgatggcgat gcaaaaaagt gacgaacttg ctgaagctgc caatttactt
     4081 tttctgcagg tacaatcatt aggtatgccg gcatggagtg ccggttattg catctgggat
     4141 gatgaggata aaagatcgat caccctgtca atgagcagtg agggagttct tcagccatcg
     4201 ctgcgaatgc cattaacaga agatcgctcg ttaatgcatt ttagggaagc ctatcagaga
     4261 ggtgaatcat tttttgtgga agaagttggg ggtgaagaat taaaaagaca ttattcgtat
     4321 ttgcgaacgc tgcctggcgt aaaagaaaca ttagatgata ttgaagcggc tgggtttcct
     4381 gtgcctgctt tccagatatt ccacctggct tatttttcaa aaggcttcct gttgtttatc
     4441 acttacgatc ctgtaccgga agcacataat attttcaaac gttttgcaaa agtttttgaa
     4501 cagacgtata caagatttct tgatctgcaa aaggtagaag cgcaggcaag agaagcaaag
     4561 attgaagctg cgttggagaa ggtacgatca agaacaatgg ctatgcaggg aagcgaagaa
     4621 ctaagcgatg cggcctcttt attatttaaa caaatagcag gtttaggtac caggcagtgg
     4681 tcaagtggtt ttgatatctg gaacgcaaat gaagtttcgg ccgtagcatg gatgtcgaac
     4741 ccggacggca gtataggtgt tccttttact gtgccctata caaccgaccc ttttttcaaa
     4801 cagatctatg aagccaggga aaggggtgaa gatttttttg taatggaatc aagtggcaag
     4861 gaattggaag aaacatatca gtacctgttt aatctaccag aagctaaaaa acattttgac
     4921 ggcattggaa gcctgggatt tcagatgcca gaatttcaaa ttacgcactg cgcttttttt
     4981 tcacagggat acctcatgtt catcacattt gaagcagcgc ctgaaatgtg ggatatcttc
     5041 aaacgcttcg ctaaagtttt tgaacaaacc tatacccgtt tccttgatct gcaaaaagca
     5101 gaagcacagg caagagaagc acggatagaa gcggtgctcg aaagaataag aagccgtacc
     5161 atggctatgc agaaaagtga tgaattgacg gatgtggcag gtttattatt caaacaggta
     5221 accgatattg gtattaaaac ctggactgca ggttttaatg tatggagcga agacaataat
     5281 tcttatgtag actatataac aagtccgaac ggtggcttta ttgaacctta tacagtatac
     5341 acagatacag ctgaggcatt aactgatatc agcaatgcca ggaaaagcgg agtcgaattt
     5401 gacgtgcaat atgttgaagg agaaaagatc aaacaattat acctcgcact taccaggctt
     5461 gatgaaaaac agtatgaaat aatgttgcag gatggaatcc ggttcccgtc tcatcaatat
     5521 gaacattttg tatttggttc aaaagtaagc ctgatgttta ttacttatga acccgtgccg
     5581 gaagcacacg atatattcaa acgcctggga aaagtatttg aacaaaccta tacccgtttt
     5641 cttgatctgc aaagagcaga agcacaggca agagaagcac agatagaagc tgcactggag
     5701 agagtaagag gcaaagcaat ggcaatgcat agctctgagg acctggctgc aacaatacag
     5761 ctattttatc atgaattggt tgggttaagc tctgtgccgg tgatccgctg cggcgttgga
     5821 ctactcagta aagaaaacta catcggtgat atttctttta taagtaaaac aagtgaagga
     5881 aacctcgccg aagtaaaagg gaaaatggat atggcaggtc attccatgac gaaagaaatt
     5941 tatgaaaatt ggctgattca aaaagaaatc cattttgtat tgcgtggcaa cgagatcaaa
     6001 gaatattatc agtacatgag aggccaggtt gccattcctg attacccggt tgatgccacc
     6061 caatatcttt atttccctat gttcaatgag ggatcttttt atgtggttac tgaaaatcaa
     6121 ttgtcgcagg aagatattca aacttatcgc aggtttgttt ccgtgcttag tcttacctat
     6181 aaacgttata acgatctgca aacagcagaa gcacaggcaa gagaagcaca gatagaagct
     6241 gcattggaga gagtgagaag ccgttccatg ggtatgcaga aaagcgatga actaagggaa
     6301 gtcatacagg tgatctatga gcaattgatc caattaaatt tcaacattga tttcgccgga
     6361 tttgctatgg attacaggga tagcaatgat tggaatctgt gggctgccga ctcaacctta
     6421 tcatatcccg aaaaaataca cattccttat ttagatcact cccaatttaa tcgtttcatc
     6481 gaggcaaaag aaaaaggatt tgacttccag gttaacaatc tcacattcga tgaaaaaaat
     6541 aaattgtggg atcacttttt aaaatatgtc cctgcaccgc gaccagaaat aaaaaattgg
     6601 ctgtataagt ctgccgggct ggcaacttcc tgggtacttc tgaaggatgt tacattatac
     6661 gtttgcaata ctgcgggcat tcctttctca gattcggaga accctgtact caaacgcttc
     6721 ggtcatgtgt tcgaacaaac ctacactcgc tttaacgatc taaaaaaagc ggaggcacag
     6781 gcgttggaag ccgtcaagcg tgcatctgtt gatcgtgttc gtgcagagat tgcgtcgatg
     6841 cgcaccacga aagatcttga aagaatcacg ccgctgatct ggaacgagct gacaacactt
     6901 ggtgttcctt ttatacgctg cggtgttttt attatggatg atgagcagca gcaggtgcaa
     6961 tcatttttat caacgccgga tggaaaagca attgcagcat ttcgccagcc atatgccgct
     7021 cccggtgaaa tttcagacat agtacacagt tggcataaga aagaaatata caagcaacac
     7081 tggaatgaag cccggttcat tgaattcaca caaaacctcg tcaaggaggg cgctgtcaca
     7141 agcggcgaaa aatatctcat agaaaaccgc cctacggatc tctacctgca tttccttcct
     7201 tttttacaag ggatgttgta tgctggtaac acgtcaccgt tgagtgatga tgaattgcaa
     7261 ttgatgcagg accttgctga tgcattctcc actgcctatg cgcggtatga agatttcaac
     7321 aaattggaat cagccaaagt gcagattgaa aaaacccttt ttgatctcaa acaggcgcag
     7381 gcgcaattgg tgcaatcaga aaaaatggcc tctctcggag aactcaccgc tggcatcgca
     7441 cacgaaatac agaatccatt aaacttcgtg aataattttt ctgaagtaaa tggagagttg
     7501 ataaatgaac tggttgatga agttgacaag ggaaattacg acgaggtgag acttatcgca
     7561 gttagtctaa aggacaacga ggaaaagatc attcatcacg gcaaacgtgc cgatgcgatt
     7621 gtgaaaggta tgctgcaaca tacccgcacc agcgcaggtc agaaggagcc aacagatatt
     7681 aatgctttat ctgatgagta tatacgcctc tcttatcatg gtatgcgcgc aagggataaa
     7741 gatttcaatg cagagataaa aacagatttc gaccctacaa ttggtaaaat aaacatcgtt
     7801 ccgcaggata tgggaagagt tttattaaac ctatacaaca atgcttttta cgcagtaagt
     7861 cagaagctcg cagctcaagg ctcacaactc gaggctgata ataggcgcta cgtccccaca
     7921 gtcacccttg ttacaaaaca atatgatgct aaaatttcaa tttctgtaaa agataacggc
     7981 cccggcattc cgcaaaacat ctttgataaa atcttccaac cgtttttcac cacaaaaccg
     8041 acaggtgaag gaacaggctt gggtttgagt ttgagttatg atattattaa agctcatggg
     8101 ggtgaaataa gagtggagac tagagaagga gaaggaacgc agtttattat tcagttacta
     8161 actacttaat ataaaaatga gaacctgtat aaaaatagca ttgctactga taatttcaat
     8221 cgcagttaat gcgcaacagg tatatcctga cattttaaac agccattaaa aagtgtttga
     8281 gttatgccat tagcaaagcc cggtggagaa atagaagtgg gagctaaaga agtgagggaa
     8341 atgactttgt tattttatta cagctgtaga acttgattcg gatctttaaa accaattaac
     8401 tgtataccat gagcaaaagt gttttcttat tgctgcttat ttccatttca accttttctg
     8461 aaaatttatg tgcacaaaaa atatttcaca aaattgattt aggggataac gcaggaggca
     8521 tcactggtat tatacaggat cggcttggat atatctggtt tgctgcacaa ggcaaagggt
     8581 taataaaata cgacggctcc aggtttattg cgtatacgca taatgagaat gacactaact
     8641 caatagcagg aatattgttg gaagcactgg cgcttgactc atccggaaat atctggatag
     8701 gcacaaatgg caatggaatg gatatgctcg atccatcaac cagtatattc aggcattttc
     8761 gtcatcgtgc aaacgatccg ggcagcattt cccatgatac ggttgatgca attcttgaag
     8821 atcatttggg aaatttatgg ataggcactg tacgcgggct tgaccgttac gatcgtaata
     8881 ccggcaagtt tattcactac acgcacaatg acaatgatgc aaacagttta agcggtaccc
     8941 atgttagggt tttatatgaa gacagggaag gaaatttgtg ggtaggctgc gggtctcctt
     9001 tccccaatga agaaagctgg aaagatgaag gcgggttaaa ccgttttgac agaacaacag
     9061 gtaagtttac acgataccta cataattcag atgaccctgc gagcatagca aataataagg
     9121 taagagcttt gctggaggat agtaaaggaa atttttgggt aggcacagca ggtgatggtt
     9181 tgcaaacact caacaggaaa accgggaagt ttatacatta ttattatgat tcaacacatc
     9241 cccataattt gagccgtggt gttgtcgata ctacctccat cgaccaggtt caatttataa
     9301 aagaagatat taaaggaaag gtatggatcg gagtcttaca ccagggcata ttcgaatacg
     9361 atcttcaaac aaaaaaaaca acgcatcatg gttatatagt tatcggccaa aaattaatta
     9421 cagcagatac gttaaccggg tttaatgaca acagcgcatg gagtgcttta actacaaaag
     9481 acggtttaac gtggatagga acattattta gcgctggctt atataaaata gatttcaata
     9541 aaaatgtgtt tcttacttat gagaaaagcc catcagctaa tgccttttat aaaagcgctg
     9601 acggcacgct ttggatagcc actggcaatg gtatggtgcg aaaggatggg aaaaccggta
     9661 atcaaagaat atttgttcac gattccaaca attcaaatag ccttagcaat aatgttgtta
     9721 ctgacattaa acctgactgg ggaggaaatt tatggattgg aacactcggt ggcggtctgg
     9781 atgaatttaa cctggttact aaccagttca cgcatattaa taccaatgtc cattcggcaa
     9841 caggcagaga ctcgataggg attttatatc ccgatgttgc cggcaattta tggataggga
     9901 cagttaccgc gggtcttata aaaagagaca agacaaccgg gaagcttttt catttcatgc
     9961 atgatagtaa tgatacgaac agtgttgccg gcaacggtat tatttcaatc accggaaaca
    10021 aaaaaaatct ttgggtaagt acgcaggcgg gtttggataa actggaaatg gcatccggaa
    10081 aattaacgca ttacttacat ggaatccagg catcaggtgt tgtgattgat ggcaaaggca
    10141 ttgtttgggc aggaacatca aacggtttat atgaatatga taccggtaaa aatagtttta
    10201 tactcttcaa cgatcctgca gtacaaatag gaagagtgat cagcctgaat gcagataaaa
    10261 atgataacat ctggataagt tcaggcactt caattttttt acttaaaagc gaccgtaagc
    10321 atataattat gtatgcaaat aataaccttc acgcagccgg ctggatttca aataatgatt
    10381 atatcagcga agatggggaa gtgtttgttg gagatgtcac cggctattac cgtttttatg
    10441 cggatagtgt acagcaggaa gtgtatgccc cgcagctaaa ctttgcaagt ttacaaattg
    10501 gaggcgctga agtaaagtca ggcagtggta tcttaaacaa agccttatcc attacagaag
    10561 agctaaaaat tccagataat aaaaattcat tttcaatagc gttttctgcc atcgattacc
    10621 gcacaagcgg tgagaagaaa gttgtttata tgctggaaaa ttacgataac caatggcatc
    10681 aaacagcatc tgatcaaact gcatatttct ataatcttcc tgttgggcac tatacattaa
    10741 gggcaagagc cgttaatgca caaggtgcat ggatggaaaa atctctttcc attattgtta
    10801 caccgccctg gtggcaaaca tggtgggcca ttaccattct tgttgttgta tttatcggcg
    10861 tgatcgttgg cttttcttat taccgttctt atagtttgca aaaagaaaat aaagtattgg
    10921 aagaaaaagt aaagcatcgt actacacaat tgcaaagatc attggaagaa ttaagaacaa
    10981 cacaaactca actcatccaa tccgaaaaaa tggcttcgct tggtgagctc acagcgggca
    11041 ttgcacatga gatacagaac cccttaaact tcgtaaacaa tttttctgaa gtgaatggag
    11101 agttgataaa tgaactcgtt gatgaagtag acaggggaaa tttagatgaa gtgcgcctga
    11161 ttgcagtgag cctgaaagac aacgaaaaaa agatcatgca tcacggcaaa cgcgccgatg
    11221 caatagtaaa aggaatgctg caacattcgc gtacaagcac aagtcaaaag gagcgaaccg
    11281 atattaatgc tttgtgtgat gaatacttgc gattgagtta ccacggcatg agagcgaaag
    11341 aaaaaaattt caacgcaaca ctccacactg attttgattc atcaattgga aaaataaata
    11401 tcattccgca ggatatcgga agagtgctgc tcaatcttat caacaacgca ttttatgcag
    11461 tgagccaaaa gctcgcgact cacagctccc agctcgcagc tggcaatggc aattacgtcc
    11521 caagcgtcac cattgtcaca aaaaagctgg atgataaaat tgaaatctcc gttaaagata
    11581 acggccctgg cattcctcaa aatatcgttg ataaaatatt ccaacccttt ttcaccacca
    11641 aaccaacggg ccagggaaca gggttaggtt tgagtttgag ttatgatatc atcaaagccc
    11701 atggaggtga gatgtccgca ggatccggtg caaaagccga aacaaaagag ggggaaggaa
    11761 gtgaatttat aattgtgtta ccggcttaaa aataagcatt atgcttttgt tgcgtcgcac
    11821 ccttgtactt gaaaccatga gcagcaaagt cagaagttag cacataacaa tcttccttat
    11881 cgaaggagac agttgttcgg ttcaattcaa attaccattt aataagttta atgatgatga
    11941 aattcctaac cactctcgta atatgcttct tatgtaccgc ggcatttccg cagaggcggt
    12001 tattggatag tatcaggtac caattggata ttgtgaaaga tgatacaagc cgcgtgttaa
    12061 ttttatcaga cttaagtttc tacatacttt tttttaatgc tgattcaggc ttgatatacg
    12121 cagacagagc aattgatctt gctgaaaaaa caaattttgt gaggggtaag gtcagggctt
    12181 tggcagccaa agcaagttta cttgaaacca agggagatct tcccgccgca ttacaattat
    12241 cgtttgctgc actggaactg gcagaacaac aaaagctact attagaaaca tcgatgtgtt
    12301 taacggttac cgcgaatata ttttatgacc tcaatgatta tacaagagcc atcggttttt
    12361 atcgacgcgc actcccaatc aatgaagtgg taaaaaatca aataggagcg cggtcctgga
    12421 aatatcaaac agacgtaaac cttggcaccg cctttatgtt aaacaatcaa aatgattcgt
    12481 catttgctta cttgtcaaaa gcttataagg aaacatttaa ggacgatgtt tggcaccccg
    12541 ttttttccat gtttttcgga gccctggaat tccgcatggg gcaccgcgag accggaataa
    12601 attatttaat tgaaagttta caacttttta aagatgacac tccttattct ctttcggatg
    12661 tgtgtcgtat gttgtcaaga tgctacagcg atatgaatat gcctgattct gcaatacatt
    12721 ttgcggaaaa gggactagca gcagcgcaat ctattgggta caaaacaacg atcctggaaa
    12781 caagcagact gttatcggaa ttatatgaac caaaagattt aaaaacagcg ctttattatc
    12841 gcaagatcta cgacacaacg aataatattt tatacggcac aaataaagta agagatctcc
    12901 agaaaacgct attaaatgaa caggacaggc agcgaaaaat tgaagccgaa aacgtcgctt
    12961 atcaaaacag ggtaaaacaa tatggtttat taggaggact ctttattatt ctcctagtgg
    13021 cttttatact ttaccggaat aatctacaga gaaagaaatc taacgttatc ctaagtcatc
    13081 aaaaagagca attagaactt acattaaaag agctgaaatc cacccaatcc cagctcatcc
    13141 aatccgaaaa aatggcttcg ctaggcgagc ttactgcagg cattgcacat gaaattcaaa
    13201 accctttaaa cttcgtgaac aatttttccg aagtcaacgg agaattagtt gatgaattga
    13261 aagcgcaact tgcgaccggc aacctgcaac ttgcaacgga aattgcagat gatctaaaag
    13321 ataatgaaag taaaattctt taccacggca aacgtgccga tgcaatcgtg aaaggcatgc
    13381 tacagcattc acgcacgagc gcaggtcaga aggagccaac agatattaat gctttagccg
    13441 atgaatatct atgcctgtcg tatcatggta tgcgcgcaag ggataaagat tttaatgccg
    13501 aaataaagac aagtttcgac accacaatcg gtaaaataaa tatcgttccg caggatatag
    13561 gaagagtcct cttgaattta tacaacaatg cattttacgc aacggcagac aagctcaaag
    13621 gtcaaagctc gcagctcgca gctcaagcct caccgctcga agctactagc tcgccttacg
    13681 tccctaccgt cacagttatc acaaaaaaat atgatgctaa aatttcaatt tctgtaaaag
    13741 acaacggccc gggcattcct caaaatattg tcgataagat ctttcaacca ttcttcacca
    13801 caaaaccaac aggcgatgga acaggacttg ggttaagttt aagttacgat atcatcaaag
    13861 cacacggagg tgaaataaaa gtggaaaccc tgtctgccgc agcggcagcg caggcaggaa
    13921 aagaaggtga gggaaccgag tttattattc aattacctct tctctccgga agttaataac
    13981 gggaaagaca atttatcatt ctatcttacc ccccaggctg aacgtaccaa taccaaaaca
    14041 aacactcaac atggaatcca tcgcccttgc accaatatta aaagaggaaa ctgacaagca
    14101 cccaaaagaa atgtaccggg tagcattcac taccatgtgg gacatgtttt cattttacgg
    14161 aatgaaggca ttgttgatag cttatatcgt tacacaactg cgactcggac aaccgatggg
    14221 atacgccatt ctgggtactt acgctgcatt ggtttttggt ttcaactttt tcgggggtat
    14281 ggtggctgat aaatttttag gaacacgaaa ggcaattatt tggggtggct atctgcagat
    14341 aaccggtcat ctcatactcg ctattccatc cgatctgcca ttttttgcgg gccttgcgct
    14401 ggtagctacc ggcgcaggtt tcaggaacgg cccgagcggt tcatttgttg gaagctttta
    14461 cagcaacgat aaatcaagaa aaaaagatag cgggtatgcc ctgtactata tgatctttaa
    14521 tatgggcgca gcactcggcg ggttgatctg tggttatctt ggacaaaata ttaactggca
    14581 ccttggcttt ggcgctgcct gtatttttat gatcattggg caggcgcaat ttatggcggg
    14641 cattaataat tcgcatggag taccgcccga tataaaaaaa ttaaaggaaa aggtctttat
    14701 aaaactatta gaccgggaaa ccatcattta tcttttaagc ctggttgtag tggccatggt
    14761 aacctt
//
LOCUS       DASQJI010000617         2281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1770109,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000617 DASQJI010000000
VERSION     DASQJI010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770109"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1140)
                     /locus_tag="VEV83_16795"
     CDS             complement(<1..1140)
                     /locus_tag="VEV83_16795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HYK46840.1"
                     /translation="MTVVQQRACVNSFQKIQMKYPVRIAFIAALAGFIFGFDTVVISG
                     ANLPIKELWHTSPWFHGLFIMSMALWGTVIGAVFGGPPTEKYGRKKVLILIGFLFTIS
                     ALGSAVALNPYMFSFFRFIGGLGIGISSVAAPTYVSEISVAKSRGRLVAMYQFNIVFG
                     ILLAYLSNYLLKGVGGANDWRFMLGVMAVPSLIYSVMVFSIPESPRWLINKRKDIDGA
                     RVVLSRLGETNVDEEIAQIQSALQHEEAVEHGGGIFVPKFRRILSLAFLIAFFNQLSG
                     INFILYYAPEILERAGLAAKDSLLSSVTIGGTNLAFTFVGLYLIDRLGRKTLLIIGSI
                     GYIVSLAMVAWCFYTHASAVVLTSFLALFIAAHAIGQGAVIWVFIS"
     gene            1326..2240
                     /locus_tag="VEV83_16800"
     CDS             1326..2240
                     /locus_tag="VEV83_16800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYK46841.1"
                     /translation="MDPGLWGIDLGGTKTEGVILPSLDEAKPLLRLRIETENYKGYDH
                     IIQQVTKLVGQMKQQSGLTPTTIGFGTPGVLDPLNQMMKNCNSTALNGKPLKKDLEEI
                     LAVDAVLANDANCFALAETHWGVVKEKTPNAKMVFGIIMGTGVGGGIVHEGKVWNGFH
                     GIGGEWGHNFLDETGGPCYCGKTGCVETVLSGPALQKFYSNSSGQELTLKPIVDAYRL
                     GKDSAAAQTMERLFQYFGKAVSVVINLLDPDVIVIGGGVGNIDELYTKGYEWIVKYIF
                     NDRVEVPLFKPMLGDSAGVFGAAALVAE"
BASE COUNT          652 a          514 c          549 g          566 t
ORIGIN      
        1 tgatataaaa acccaaatta ctgcgccctg cccaatcgca tgcgccgcaa taaaaagtgc
       61 aaggaagctg gtaagcacca ccgcgcttgc gtgtgtgtaa aagcaccacg ccaccatagc
      121 gaggctcaca atgtagccga tggatccgat tatcagcaac gttttgcgtc cgaggcgatc
      181 gattaaatat aagcctacaa acgtgaaggc gaggtttgtg cctccgatgg tcactgaact
      241 caacaatgaa tcttttgctg ccaaacccgc tctttctaat atttcgggag cgtagtacaa
      301 gataaaattg atgccggata gctggttgaa aaatgcgatc aggaaggcta gtgaaagaat
      361 tctcctaaac tttggaacga aaattccgcc tccgtgttcc accgcttctt cgtgttgtaa
      421 tgccgattgt atttgtgcaa tttcctcatc cacatttgtt tctcccagcc tggacaacac
      481 tactcttgct ccgtctatat cctttctctt gttgattagc cagcgtgggc tttccggaat
      541 gctaaatacc attaccgaat agataagcga aggcacagcc ataacgccca gcatgaatcg
      601 ccagtcattc gctccgccta caccctttag aagataattc gatagatacg ccagcaaaat
      661 accaaatacg atattgaatt ggtacatggc aacgagtctg cctctcgatt tcgccactga
      721 tatttctgac acgtacgtgg gtgctgcgac cgatgagata ccaataccaa ggccgccgat
      781 aaatctgaaa aaggaaaaca tgtaaggatt tagcgccact gctgatccaa gagcggagat
      841 ggtaaaaagg aaaccaatca ggatcaagac tttcttccgg ccatactttt cggtaggcgg
      901 gccaccaaac accgcgccga tgacggttcc ccacaatgcc attgacataa taaacagccc
      961 atggaaccac ggcgatgtgt gccataattc tttgatcggc aagttggcgc ccgaaatgac
     1021 aacagtgtcg aatccaaaga taaaaccagc tagtgccgca ataaatgcga tgcgaacagg
     1081 atatttcatc tgaatttttt gaaatgagtt gacacaagcc cgctgttgaa caactgtcat
     1141 ggaggctagc tcacttatca gcagccgggc tttaggcact aaatgtaaat cttagttgcc
     1201 tgagaacatc tcgagcggct aacttttttg acattcgatg cgatctcagt gcaaaaattt
     1261 tttgcgcgta acatggaatt atctttcaac aacacagttt atttgcgata tcatttgtca
     1321 aaatcatgga tcccggatta tggggcattg acctcggcgg cacaaaaact gaaggtgtaa
     1381 tacttccttc cctcgatgag gcaaaaccgc tgttaaggct gcgcatcgaa actgaaaatt
     1441 acaagggcta cgaccacatt atccagcagg tgacgaaact ggtggggcag atgaagcaac
     1501 aatcggggtt gacaccaact acgatcgggt ttggcacacc cggtgtcctc gatccactta
     1561 atcaaatgat gaagaactgc aacagcaccg cgctaaacgg caaaccgctg aagaaagacc
     1621 tcgaagaaat attagcagtt gatgctgtcc ttgctaatga tgcaaattgt ttcgcactcg
     1681 cggaaacgca ctggggagtt gtgaaagaga agacgccaaa cgcaaaaatg gtttttggga
     1741 tcatcatggg aacaggtgtt ggcggtggca ttgtacatga gggcaaggtg tggaacggat
     1801 ttcatggcat cggaggcgaa tggggacata actttttgga tgaaaccggc ggcccatgtt
     1861 attgcggtaa aacaggatgt gtagaaactg tgctctcagg tccggctttg cagaaatttt
     1921 attcaaactc atccgggcaa gaattaacgt tgaaaccgat cgttgatgca tatagattag
     1981 ggaaagacag cgctgcagcg caaacgatgg agcgattgtt tcaatatttt ggcaaagctg
     2041 tttcggttgt gattaacctt ttagatccgg atgtgatcgt gatagggggc ggcgttggga
     2101 acatcgatga gctgtacaca aaaggctacg aatggattgt aaaatatatt ttcaacgacc
     2161 gcgtcgaagt gcctctgttt aagccgatgc tcggagacag cgcaggtgtt tttggcgccg
     2221 ctgcgcttgt tgctgaataa tgtttgttac gatcgttttt gcagtaagac taattagccg
     2281 g
//
LOCUS       DASQJI010000618        10191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_693844,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000618 DASQJI010000000
VERSION     DASQJI010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10191
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693844"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1572
                     /locus_tag="VEV83_16805"
     CDS             <1..1572
                     /locus_tag="VEV83_16805"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK46842.1"
                     /translation="LAVTDRKYINIFITIGILILLIACANYINLSTAKASARSKEVGI
                     RKVVGASFAQLFTQFLTESFLLTFTAVCISLVAVDALLPYLNNLLGKQIPFYIFDASF
                     IASLIAGVIVISLLAGFYPALILSRFRPVQTLKGAFSKTGGSGITVRKSLVVFQFAIA
                     VCLILGTIIVRSQLQFMQSEKLGLDKDHVLFIHGNADLYDKLDAFAEKLRSTSGVEDV
                     SLTWRSPFETVTGNGFSLNPNPSTDDDWHVVGAIAADPHYLSVLGIQLLAGRNFDPGK
                     INGEKTVNEFIVNESFLRHYNLKPNQVVGKQVLLGLTGTGTIVGVMKDFHTSSLHDKI
                     EPVVLFNSPQYFGSLLVHVAPNALPGALSNIQNVWHSYVPMRPFNYSFLNDEYDSMYR
                     TEQKLGALMSIFCGVAIFITCLGLLGLMTFIVTNRTKEIGIRKVLGASVMNITAMLSK
                     DFLKLVVVAIVIASPVAWYFMNNWLQDFAYRINIGWYVFLITGIVALGIAVITISLQT
                     IKAAVANPVKSLRTE"
     gene            1691..4087
                     /locus_tag="VEV83_16810"
     CDS             1691..4087
                     /locus_tag="VEV83_16810"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46843.1"
                     /translation="MFNNNLKIALRNLWRNKTFASINIFGLAFALTCCLLMILFIKNE
                     LSYDKFNRNAGSIYRVAFSDYLNMGGFATTPIPIGPALKQQMPEVQHAARIDYNDSYL
                     MKYGANEHFEPIAFADEDIFRIFSFPLLEGDPNTALKEPNSIVISEQMARKYFGNEDP
                     LNKILKIGSTGTLNSTVKGVFKDLPQNSQLHFNCLLSFTTMYKLGWTTNLWDQMPGNY
                     TYVLLNNSSDVEKFAAKLPAFVQHNEVLKTHKDLSYNLILQPLTTIHLGSHLQGELPG
                     AGDISYIYLFTAIAFIILLIACINFINFATANAIKRAKEIGVRKVIGAQRFQLIRQFL
                     SESLLTYFLAIMVALVLAQLLMPVFNYISGKSFTSSDITQPGIIAGLLLTGLIAGFAA
                     GLFPSWSISQLSSLDALKGKVSGTGSRITVRKALVTVQFVASLALMVCTSVVYEQMQY
                     IRQQVSLTQGQQVIVFPVNNALVQKYEALKTQLLENSNIASVTATTNAPGFTQDGWPV
                     AVTQNVPSVQAENYVTDDDFLKTMNIPLLAGRSLNHNIASDVTSGFVVNETAVRALGF
                     KNAHDAIGKTIVWGGGDNKKHGSIVGVVKDFYFQSLHEKIAPALFQFAPYDWMTYNYI
                     LVKLQPGNFNSTIDFIRKTVAAFDNSWLVDYKFFDENFQSLHKKDEQQGQIFAAFAAI
                     AMLISCLGLFGLTIYATQQRVKEIGIRKVLGASVVGIVNLLSRDFITLILIAACIAFP
                     VAWWGMNKWLQDFAYRIQISWLVFAIAGAAMMTIALVTVGVQAMKAAMANPVKSLRTE
                     "
     gene            4175..6586
                     /locus_tag="VEV83_16815"
     CDS             4175..6586
                     /locus_tag="VEV83_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46844.1"
                     /translation="MFKTAWRNLTKHRAYAVINISGLAVGIAACVLLYIVVTYELSYD
                     TWQPNYNRIYHVAGKIKSAEGDGYNEGVPYPAYDALRAQFPDVVTAAMFQNHNSQVTV
                     LNVNDPNSASGNKFLEESSVFFSDPNFFSVFQYKWLAGSAAVLKNPNSAVLTRKMAEK
                     YFGNWQTAMNKFLKLDNTATVEIAGVLDDPPQNTDFPLGVVASYETMKKFPDAYGYTD
                     RWGSVTSNFQAFMLLPQNVSAQTINRRLLAFSNEHYNADKKDIFRRYDFLQPLSDIHF
                     NTQIGNFGDHITSKATLWTLSLIGVFIILMACINFINLSTAQAVGRSKEVGIKKVLGG
                     TRAKLFGQLMRETFIIVLVAVGLALIIASAFLPYIKNIASISEKLSLLHTSTVLFVAS
                     IVIIVTLLAGAYPSLILSGFKPALALKNKITSATVGGISLRRGLVIIQFAISQVLITG
                     TIIAVSQMNYVHNADLGFNKEAVLVLSYTNVDSMVNLRQPAFKQNLLAINGVQSVSFS
                     SDVPSSESNSSGNFAYDHKPDENFEVYRKFGDEDYFKTYGLQIIAGRSYAKSDTTKEV
                     VVNETMVKKLGVKDPKAVIGHEIRLGRSWYPIVGVVKDFKTNSLRESIKPLALAERNK
                     RYYYTAVKLNTSQLSQVMKKIETSWNQFFPEYVYTPTFMDDRINDFYKQENQLSLLYK
                     IFAGIAIFISCLGLYGLVSFMAAQRTKEVGIRKVLGASVVNIVYLFSKEFTILILVAF
                     AAAVPVAYYMMSNWLNNFAFRIDITAWVFVLAIISSVIIAWITVGYKSITAALANPVK
                     SLRTE"
     gene            6732..7940
                     /locus_tag="VEV83_16820"
     CDS             6732..7940
                     /locus_tag="VEV83_16820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46845.1"
                     /translation="MKTILLSLLLCCTCVTTMYAQHDEVSYSKNDNEFTLKIKNSSEQ
                     VSLTIKGDVKLADDDNSIAELSRDGSIFYRKKNETIEVENDAQGNLVYTINDNRKTNL
                     SEGDKVLIKDFVRLLINYGVDADNRVRRIYAQKGTSGVLDEVEHFESDYVREIYLSYL
                     LKEQKLSKNEMVALLDKIDQYLTSDYYKAELLDGVMSSFLSEESASDAYLKVVSNMTS
                     DYYQTNTVNKILNTKLTEKQFSQVLAIVKNMKSDYYQAEVLTKLSNNNDISNDRFANV
                     MKIAGSMSSDYYKAEIITTALKNKSLNIDRYSQTIEAMENMTSDYYKYSILTSLVDED
                     IKDESAWSTLIEYAGKMHSDYYEAELLMMIADKMPASETLKKKITEAAKNISSDDYYG
                     KVIRAVEKRT"
     gene            8202..8579
                     /locus_tag="VEV83_16825"
     CDS             8202..8579
                     /locus_tag="VEV83_16825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46846.1"
                     /translation="MKKFLSFSGCVMCILCSFSTYDHSLAGHWISRDGAPGSKILVDF
                     NLDGTFRVSVNGQTENEGAYKQYNDTLYMYDANCGIQTAGKYKLNFYTEDSVSFELIQ
                     DSCATRIQEVNGGTIARLREGQQ"
     gene            8648..>10191
                     /locus_tag="VEV83_16830"
     CDS             8648..>10191
                     /locus_tag="VEV83_16830"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46847.1"
                     /translation="MKNFFKVAIRNIFRQKLYSLFNLVGLALGISCGLLLSLHIREEL
                     SYDKNFPKHDRIYRMVTTEWSKSSPPLAAEMMKAFPEIKSTARFAEAGTNVVSTEQGK
                     QTESTGLFADSSSVEVFDFKTVAGNPVAALSEPSAVVLTKSLSEKLFGNNNPLNQKLT
                     FGDNQELWVRAVIEDLPGNTHLKFDYLVSMPTFYKYVPPDWIGSRGWMFGWTYVLFNN
                     KEDIHKAEARLKAFYLKYQEGMFDTKQAAEEDASSARFQPLTAIHLHSDLIQEMGPNS
                     SIIYIYIFIAVEVMILIIACVNFINLFTTQALKRMKEVGIRKILGAKKRQLIFQFIGE
                     AFLLTFLAAVVAVMIYEVALPFYNTIAGKHITFLDLFSSSNMFIFIGIIVFVGLISGL
                     FPAVFISGFQPIDSLKSKNPRSPAIALRKSLVVFQFVVSGLLITSTILIYQQMQLFNN
                     KQLGFDKDQVVVAKLYGKFKEKVVTNPDIIKNELLKNPDILSVGKASNVIGDDLSVES
                     VTPVNAT"
BASE COUNT         3016 a         2004 c         2293 g         2878 t
ORIGIN      
        1 ctcgctgtaa cagatcgtaa atacatcaac atttttatta cgatcgggat attgatctta
       61 ttgatcgcct gcgccaatta tataaacttg tccactgcaa aagcttctgc gcgttcaaaa
      121 gaagtcggta tccgaaaggt ggtcggtgca agctttgcac agctctttac gcaatttctt
      181 actgagtcat tcctgcttac gttcacagcc gtttgtattt cgctggttgc ggttgatgcg
      241 ctcttgccat atctcaataa tttgttaggc aaacaaatac cattttacat tttcgacgcc
      301 agttttattg caagcctcat tgcaggtgta atagtgattt cattgcttgc aggattttac
      361 cctgctttga tcctttcaag attcaggccc gtgcaaacat tgaaaggtgc attttctaaa
      421 acaggcggtt ctggtataac ggtaagaaag agtttggtag tgtttcaatt cgcgattgcg
      481 gtgtgcctca tcttaggaac gatcatcgtt aggtcgcaac tgcagttcat gcaatctgaa
      541 aaattagggc tggataagga ccacgtgctg ttcattcatg gcaatgccga cctgtatgat
      601 aagttggatg cattcgctga aaagcttaga agtacgagcg gtgtggagga cgtttctttg
      661 acatggcgat ctccgtttga aacagttacg ggcaatggct tttcgctaaa cccgaatcca
      721 tccactgatg atgattggca tgtggtgggg gctatcgccg ctgatccgca ctatctttca
      781 gtgctgggta ttcaattatt ggccgggaga aattttgatc ccggtaagat aaacggagaa
      841 aaaaccgtta atgagtttat cgtaaatgaa tcttttcttc gacactacaa cctcaaacca
      901 aaccaggttg tgggtaaaca agtgctgctt ggcttaaccg gtacgggcac aattgtaggc
      961 gtgatgaagg attttcacac gagctcactg cacgataaaa ttgaaccggt cgttctgttc
     1021 aacagcccgc aatacttcgg aagtttattg gtgcatgttg cgccgaacgc tttgcctggc
     1081 gctctgtcca acatacaaaa cgtatggcac agctacgtgc caatgcggcc attcaattat
     1141 tcatttttga acgatgaata cgactcaatg tatcgcaccg aacaaaaatt aggggcgctc
     1201 atgtcgatct tttgcggagt ggctattttc attacgtgcc tgggcctgct cggattaatg
     1261 acatttatcg tcactaaccg aacaaaggaa ataggcataa gaaaagtatt gggagcatca
     1321 gtcatgaata tcacagctat gctttcaaaa gattttctca agctggtagt ggtggctatt
     1381 gtaattgctt cgccggttgc atggtatttc atgaacaact ggctgcagga ttttgcttac
     1441 aggataaata ttggctggta tgtttttctg attacaggca tagttgcact tgggatcgcc
     1501 gtcatcacga tcagtttgca aactattaag gccgctgttg caaacccggt gaaatcgcta
     1561 agaacggaat gatggtatga gtgatgagta atgaataatg agtgaagaat gatgagtagt
     1621 gagtgtatga ttgacaattc ctaaatccta attcctaaat cctacatcat aaatcgtaaa
     1681 tcgcactaac gtgttcaaca ataatctcaa aatagcgctc agaaatcttt ggcgaaataa
     1741 aactttcgcc tctataaata tttttggact tgccttcgcg ctcacgtgtt gcctgctgat
     1801 gatccttttc atcaaaaatg aattgagcta tgataaattc aacaggaacg cgggttctat
     1861 ttaccgtgtt gctttttccg actaccttaa catgggtggt tttgccacaa cgccgattcc
     1921 catcggcccg gcattaaaac agcagatgcc cgaagttcaa cacgctgcac gaatcgacta
     1981 caatgattct tacctcatga agtatggggc caatgaacat tttgaaccga ttgcatttgc
     2041 tgatgaagac atattcagaa tattttcttt tccactgctt gaaggcgatc ccaatactgc
     2101 tttgaaagaa ccgaattcaa ttgtgataag tgagcaaatg gccagaaaat attttggtaa
     2161 tgaagatcca ctgaacaaga ttttgaaaat tggcagcacg ggaaccctta attcaacagt
     2221 aaaaggagtt ttcaaagacc tgcctcaaaa ttcacagctt cattttaatt gccttttgtc
     2281 tttcacgaca atgtataagt taggctggac aaccaatctt tgggaccaaa tgccgggtaa
     2341 ctatacttat gttttgctga ataactcaag cgatgtggag aagtttgctg ccaaactacc
     2401 ggcatttgtc caacataatg aagtactgaa aacgcataaa gacctttctt acaatctcat
     2461 tcttcagccg cttacaacta tccatttggg atcgcattta cagggagaat tgcctggtgc
     2521 aggtgatata tcgtatatct atcttttcac cgcgatcgca tttattatcc tgttgattgc
     2581 ctgcatcaat ttcataaatt ttgcaacggc aaatgcaatt aagagagcta aggaaatcgg
     2641 tgtgcgcaaa gtgatcggtg cgcagcggtt tcaattgatc cggcagtttt tgagtgaatc
     2701 tctactaact tattttctcg cgataatggt ggcattggtg ttagcgcaat tgctgatgcc
     2761 ggtctttaat tacatctccg gaaaatcgtt cacgtcttca gacataacac agcccggcat
     2821 aatagccggg ttattattaa ccggattaat tgcaggcttt gcggcaggcc tgtttccttc
     2881 gtggtcaatt tcacaactct catcactcga tgcgcttaag ggaaaagtga gtggtaccgg
     2941 ttcgaggatc accgtgcgaa aggcattagt gacggtacaa tttgttgctt cattggcact
     3001 gatggtctgc acgtctgttg tttatgagca aatgcaatac ataagacaac aagtttcctt
     3061 aacgcagggt cagcaggtga tcgttttccc ggtaaataat gcccttgttc agaaatacga
     3121 ggctctgaaa acacaattgc ttgaaaacag taacatagcc agtgttactg caaccactaa
     3181 cgcacccgga ttcacccagg atggatggcc ggtagctgtt acacaaaatg tcccatctgt
     3241 ccaggcggaa aactatgtaa ccgacgatga ttttttgaaa acaatgaaca ttcctctcct
     3301 ggccggacga tcgttgaacc acaatatcgc atcagatgta acaagcggtt ttgttgtgaa
     3361 tgaaaccgca gttcgggcat taggatttaa aaatgcacat gacgccatcg gcaaaacgat
     3421 cgtgtggggt ggcggtgata acaaaaaaca tggttccata gttggggttg ttaaagattt
     3481 ttatttccaa tcgttacatg aaaaaattgc tccggcattg ttccagtttg caccgtacga
     3541 ttggatgaca tacaactaca tcctggtgaa actgcaaccg ggtaatttca acagcacgat
     3601 agatttcatt cgtaaaacag tcgctgcatt cgataatagt tggttggtcg actacaagtt
     3661 tttcgatgaa aactttcaat cacttcataa aaaggatgaa cagcagggcc aaatttttgc
     3721 agcctttgca gcgatcgcca tgctcatttc gtgccttgga ttgtttggtc ttaccattta
     3781 tgcgacacag caacgtgtga aggaaattgg tattcggaaa gtgcttggcg ccagtgttgt
     3841 tggtattgtg aatttattat cacgcgactt catcacgcta atactgatcg ccgcctgcat
     3901 agcatttccg gtcgcgtggt ggggaatgaa taaatggctc caagattttg catatcgcat
     3961 acagatcagt tggctggtgt ttgcaatagc gggagccgca atgatgacca tcgcactcgt
     4021 aacggttggt gttcaggcaa tgaaggccgc gatggcgaat ccggtgaaat cgctgagaac
     4081 ggaatgaccg atgaataatg agtgatgagt aatgagtgtg tgaatgatga actgcagaag
     4141 gcatcattga attatccata gaaaaacatt ttttatgttt aaaactgcat ggcgaaactt
     4201 aacgaagcac agggcttatg ctgtaattaa tatcagcggg ctcgccgtag gcattgccgc
     4261 ttgtgtttta ttgtatatag tagtaacgta tgaattgagc tatgacacat ggcagccgaa
     4321 ttacaaccgc atttatcatg tggctggcaa aataaaaagt gcggaaggtg acggctacaa
     4381 cgaaggtgtt ccgtatcctg cgtatgatgc actccgggcg caatttcctg atgtagtaac
     4441 ggcggctatg tttcaaaacc ataatagcca ggttacggtc cttaatgtta acgacccgaa
     4501 cagcgcttcc ggaaataagt ttcttgaaga gagcagcgtg tttttttctg accctaattt
     4561 cttttccgtt tttcaataca agtggcttgc cggctccgca gctgttttga agaacccaaa
     4621 tagcgccgtg ctgacgagaa aaatggctga aaaatatttc ggcaactggc aaactgcaat
     4681 gaataaattc ctgaagcttg ataatacagc aacagttgag atcgccggcg ttttggatga
     4741 tcctcctcag aatacagatt ttccactagg tgtggtagcc tcctacgaaa cgatgaaaaa
     4801 gttcccggac gcttatgggt acaccgatag gtgggggagc gttaccagca acttccaggc
     4861 gtttatgctt ttacctcaaa atgtatccgc gcaaacgatc aaccggaggc tattggcttt
     4921 cagtaatgaa cattacaatg ccgacaaaaa agacatcttc aggagatacg atttcctgca
     4981 gccgctgagt gatatacatt tcaatacaca gatcggcaac tttggagacc atattacaag
     5041 caaagcaact ttatggacgc tctcgctgat cggcgttttt attatcctga tggcctgtat
     5101 caattttatc aacttgtcga cagcacaagc ggttggacgg tcaaaagaag taggcataaa
     5161 aaaagtgctt ggcggcacaa gagcgaagct gttcgggcaa ctaatgcgtg aaacatttat
     5221 tattgtttta gttgcggttg gccttgcact aattatcgcg tctgcttttc ttccttatat
     5281 aaagaacatc gcatccatta gcgagaaatt atcattactg catacatcca ctgtattgtt
     5341 tgttgcttct atcgtgatca ttgtaacgct gttagccggt gcatatcctt cgcttatttt
     5401 atcgggcttt aaacctgcgc tcgctttaaa aaacaaaata acttctgcca ctgtcggagg
     5461 catttcgtta agaaggggcc tggtaataat ccagtttgcc atctcacaag ttttaataac
     5521 aggcaccatc atagcagtaa gccagatgaa ttatgtacac aacgcagacc ttggttttaa
     5581 taaggaagcc gtgctcgttc ttagctatac taatgtggac agcatggtta acttgcgtca
     5641 gcctgcattc aaacaaaatc tactcgccat taacggcgtg cagtctgtaa gttttagctc
     5701 ggatgtgccc tcatctgaaa gcaacagcag cggcaatttt gcttatgacc acaagccgga
     5761 cgaaaatttt gaagtgtaca gaaaatttgg tgatgaggat tattttaaaa cctacgggct
     5821 ccagatcatt gcaggacgga gctacgctaa aagcgataca acaaaggaag ttgtggtaaa
     5881 cgaaacgatg gtaaaaaaat taggcgtaaa agatccgaag gctgttattg gccatgagat
     5941 aaggcttgga agatcgtggt acccgatcgt tggcgtggta aaggatttca aaacaaattc
     6001 tttgcgtgaa tcaataaaac ccttggcgtt ggctgagcgt aacaaacgat actactatac
     6061 cgcagtcaag ttaaacacat cgcagctcag ccaggtaatg aaaaaaattg aaactagctg
     6121 gaaccagttc tttcctgaat atgtgtacac gccgaccttt atggatgacc ggatcaatga
     6181 tttctataaa caggaaaacc agctttcatt attgtataaa atttttgcag gcatagccat
     6241 ttttatctct tgccttggtt tatacggcct ggtttctttc atggcagcac agcgaaccaa
     6301 agaggtcgga ataagaaagg tgttaggagc ttccgtggta aatatcgttt atcttttttc
     6361 aaaagaattc accatactta tcctcgttgc ctttgcagcg gccgttccgg ttgcatatta
     6421 tatgatgagt aattggctta acaattttgc tttcagaata gatattactg cctgggtttt
     6481 cgtgttggca attatttcat cggtgattat tgcctggata acggtaggct ataaatcgat
     6541 aacagcagcg ttggcaaacc cggtgaagag ccttcgcact gagtagtgaa aatgaataat
     6601 gagtaatgag tgatgagtgg ctccgaacgt gaattgtgaa gtggtgagga ggagtatgaa
     6661 tagctcgcag gaggttgggc ggagtggttt gatttataaa aagatgatcc ggaataaata
     6721 aaattgacac aatgaaaaca atccttttaa gcttactctt atgttgtaca tgtgttacca
     6781 ctatgtacgc gcagcacgat gaggtttctt actcaaagaa cgacaatgaa tttactttaa
     6841 aaataaaaaa cagttcagaa caggtaagcc tcacgatcaa aggcgatgtt aaactggcgg
     6901 atgatgataa cagtattgca gaactgtcac gagacggatc aattttttat cgaaagaaaa
     6961 atgagaccat tgaagtagaa aatgacgcgc agggaaacct ggtatacacg atcaatgata
     7021 atagaaaaac gaatttgagt gaaggcgata aagttctcat taaagacttt gtacgattac
     7081 ttattaatta tggcgttgat gctgataacc gggtgagaag gatctatgct caaaaaggta
     7141 caagcggcgt attggacgaa gtagaacact ttgaaagcga ttatgtaagg gaaatatatc
     7201 tctcgtacct gctaaaagag caaaagcttt caaagaatga aatggttgca ctgctcgata
     7261 agatcgatca atatttaacc agtgactatt ataaggccga gctgttagat ggcgttatga
     7321 gttcattcct ttctgaagaa tctgcatcag acgcttatct taaagttgta agtaacatga
     7381 cgtcggacta ctaccaaacc aacactgtaa ataaaatact gaatacaaag cttaccgaaa
     7441 aacagttcag ccaggtcctg gctattgtaa agaatatgaa gtctgactat taccaggcgg
     7501 aagtattgac gaagctttca aataataacg atatttcaaa cgacaggttc gctaatgtta
     7561 tgaagatagc aggaagcatg agcagcgact attataaagc ggagatcatc actacagcat
     7621 tgaaaaataa atcgcttaac atcgaccgtt attcacaaac gatcgaagct atggagaaca
     7681 tgacgagcga ttattataag tactctattc ttacaagcct ggtagatgaa gatattaaag
     7741 atgaatcggc gtggagcacg ctgatagagt acgcaggaaa aatgcactct gattattacg
     7801 aggcagagtt actaatgatg atcgcagata aaatgccggc cagtgaaacg ctgaagaaaa
     7861 agatcaccga ggctgccaaa aacattagct cagatgatta ttatggaaaa gtaatacgcg
     7921 ctgttgaaaa gcgcacatag catattaggt ctgaacaatg atataatcta ttgacgaaac
     7981 ggtctcgcga aagctcgggt gggtcgttga aaacggaatg aaaattttca tgataaaaca
     8041 tcatttcaaa attgcattac gcacaatagg ttctcacgga gtgaaagcag cgttgggaaa
     8101 cccggttgca tcgttacgaa gtgagtgaat gatattacga tgttcattcg gagagatgaa
     8161 agtgaagggg ctaaaaatat ttattatgta agtatgcgtt tatgaaaaaa ttcttgtcgt
     8221 tctctggttg cgttatgtgt atcctctgtt catttagcac gtatgatcat tcgcttgcgg
     8281 gtcattggat ctcaagggac ggtgcacccg gttctaagat attggtcgac ttcaatctcg
     8341 acggaacgtt tagggttagc gtgaacggcc aaacagagaa tgagggtgcc tacaaacagt
     8401 acaacgatac cctctacatg tatgacgcca actgcggcat tcaaactgcc gggaagtaca
     8461 aactaaattt ctatactgaa gattcggtgt cttttgaatt gatacaggat tcatgcgcaa
     8521 cgaggataca ggaagtaaac ggtggtacga tcgcaaggtt gcgtgagggg cagcaatgac
     8581 agggtttgac tcatgagatt ggtcgtaggc taatttttct gaaaataatt ctccataaac
     8641 aagcttcatg aaaaattttt tcaaagtcgc catcagaaac atattcaggc aaaagctata
     8701 cagccttttt aaccttgttg gtttagcgtt gggcatttcc tgcggattac tgctttcact
     8761 gcatattagg gaagagctga gctacgacaa aaattttccg aaacacgatc gcatttaccg
     8821 gatggttacc acggaatggt caaaatcatc accaccactt gcagcggaaa tgatgaaagc
     8881 ttttccggag ataaaaagta ccgcccggtt tgctgaagcc ggaaccaacg tcgtaagcac
     8941 agaacaggga aaacaaacgg aaagcacagg actttttgct gattcttctt cggttgaggt
     9001 attcgatttt aaaactgttg cagggaatcc cgtggcggca ttaagtgagc catctgcagt
     9061 agtgcttaca aaaagccttt ccgaaaagct ttttggcaac aataacccgt taaaccagaa
     9121 actcacgttc ggtgataatc aagaactgtg ggtgcgtgcg gtgattgaag atttgcccgg
     9181 aaacacgcat ttaaagtttg attacctggt gtcaatgccg acgttttata aatatgtccc
     9241 gcctgactgg ataggaagca ggggttggat gtttggctgg acgtatgttc tgtttaacaa
     9301 caaagaagac attcacaaag ccgaagcaag attaaaggcg ttttatttaa aataccagga
     9361 agggatgttt gataccaaac aggcagcaga agaagatgct tcctcggcaa ggtttcaacc
     9421 gttaactgcc attcacctgc actctgacct tatacaggaa atgggtccaa acagcagcat
     9481 catttacatc tatattttta ttgcagttga agtaatgata ctcatcatcg cctgcgtgaa
     9541 cttcattaat ctttttacta cgcaggcctt aaaacgcatg aaagaagttg gtattcgaaa
     9601 aatacttggt gcaaaaaaac ggcaactcat ttttcagttc atcggcgaag cgtttttgct
     9661 tacatttttg gcagccgtgg ttgcggtaat gatatacgag gttgcgcttc ctttttataa
     9721 cacaattgca ggaaagcata tcacgttcct tgatctattc tcctcgtcaa acatgtttat
     9781 ttttattggc attattgttt ttgttggctt aatatcgggt cttttcccgg cagtttttat
     9841 ttccggtttt cagcccatcg actcgttgaa atcaaaaaat cccaggtctc cggctattgc
     9901 gttgcggaaa agcctcgtcg tgttccagtt tgttgtttcg ggcttgctaa taacgtcaac
     9961 aatactgata tatcaacaga tgcaattgtt caataataag cagctcggtt ttgataaaga
    10021 ccaggtggtg gtggcaaagt tgtatgggaa attcaaagaa aaagttgtca ctaatcctga
    10081 tattataaaa aatgaactcc tgaaaaaccc ggatatttta tctgttggca aagcatcaaa
    10141 tgtgatcggt gatgatctga gtgttgaatc ggtaacgccg gtaaacgcaa c
//
LOCUS       DASQJI010000619        13077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_540529,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000619 DASQJI010000000
VERSION     DASQJI010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13077
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540529"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1190)
                     /locus_tag="VEV83_16835"
     CDS             complement(<1..1190)
                     /locus_tag="VEV83_16835"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HYK46848.1"
                     /translation="MKRVVLFGLMLMMSCAFLCSCNKKDYKMVTHDPDLYCKAMHELN
                     YVIIYDIFTPPVASRIFAYSNLAAYEVLAKDGTHYGSLQGKIKSLSSIPSPAKPDKID
                     FPFASIVAMTKVGRQLTFSEDRMDALIDSIKNLARNTNMTKEMFDSSVSYGSAVADSI
                     LSWAKKDNYAKTRGAKFTVTGLEGHWTPTPPGYFDAAEPKWMTIRPLVLDSANMFPMP
                     GLPPFSKDSGSAFYNIVKQVYDTVNALNDTQKWIANFWDCNGFKMHQEGHVMFATKAM
                     TPPGHWMEIIGTVCMDKNADWYQTVYNYTGSSIAMFDGFIACWWTKYHWDIIRPETYI
                     NLYIDQNWKPFLQTPPFPEYNSGHSVISAAAAQFLNRVYGNNVAFLDSSERDWSYPDR
                     KFNS"
     gene            complement(1279..2823)
                     /locus_tag="VEV83_16840"
     CDS             complement(1279..2823)
                     /locus_tag="VEV83_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK46849.1"
                     /translation="MKKLISFIILLSVPIIYYSCSKEIHGTTDNLRPLQPGSLDIDAG
                     SWKPVLLSRVDTFSVAVPPLTNSPAYIADLNEIKAYQQNLSSEQRSKVSYWAAGGVLR
                     WNELMRELVAKHNLPAYQNEDGTYPIPNSLNPFNYPQFPFSNPPYAARAYAYVSGAQY
                     DALIACWHYKALYKQPAPYKVDSMVVALNGKSDLPSYPSEAGVLAGVTAEMMKLLFPT
                     EIAAIQQKLEEQELATIESGTATRTDIKAGEALGRSIAQVFIARAKTDNASKAVGTPE
                     QWAQLDSTCRAKGEIPWHSLEDPTRPPMLPFFGNVKPFLFDSLTVISLRPQAPPSTHS
                     AEMQNQVDEVYNYTKNPTQERTRIIQFWADGAGTYTPPGHWNYIACQDFLDENYSEVR
                     WARNLALLNMSMMDAAIVCWNTKYYCYYPRPSQMNPQIKTLTGMPNFPSYMSGHSTFS
                     AAAASILGHIIPSRAGAYDAMAQEASMSRLYGGIHYHMDCDAGLETGEKIGGYAISRA
                     KTDGAE"
     gene            complement(2848..3822)
                     /locus_tag="VEV83_16845"
     CDS             complement(2848..3822)
                     /locus_tag="VEV83_16845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46850.1"
                     /translation="MQPLITGKLITCTLLFALIQFYAEAQTDADAIMMGKQNFCLGPM
                     YGHSSWKNYWEGTLKRDNLNLGTVSANMYSIMGNYGITNKLNFLFGVPYISTKASAGT
                     MHGDNGIQDLSLWLKWMPLEKKIGKSVVAVYGVGGFSTPLTGYSGDYLPLGIGLHSTN
                     LSARLIADIQHGDFFATASGTYSYRNNVTINRNAYYTTEMHYTDEVEMPDVASFQFRT
                     GYRTMRWIAEAIIDNNNTLGGFDIRRNDMPFPSNKMNWTSAGVNFKYTFKKVPGLSLT
                     GGGSYVLTGRNVGQATQFNGGVFYIFNFAKPAKDKAGVEHSCKLCVKP"
     gene            complement(3942..4448)
                     /locus_tag="VEV83_16850"
     CDS             complement(3942..4448)
                     /locus_tag="VEV83_16850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46851.1"
                     /translation="MGYRLLFYALQQQADRQLEAQLDNEAYNDQDLVTITVPLSLPYL
                     TNWKDFERTDGEIKLDGKIYHYVKQKVYEGQLILMCLPDEQKTHLENAKDDFFKLANE
                     LINNAPSQKKSGDNSIVMKLVISDYDKLQTASSFFFSNNINTVFSNHSSPALSPGKGF
                     TPEQPPEA"
     gene            4650..6029
                     /locus_tag="VEV83_16855"
     CDS             4650..6029
                     /locus_tag="VEV83_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric reductase"
                     /protein_id="HYK46852.1"
                     /translation="MKSYDAIVIGSGQGGTPLAKKLGNKGLKTAIIERRWAGGTCIND
                     GCTPTKTMVASARIAYLAGRAKEFGLRLNGFSVDMAAVYNRKQQVVESFRISSEKGLL
                     EVKNVELIYGDATFTANKELEITLGNGNKERITAEKIFINVGARPSIPKIEGLDQVDF
                     LTSTSIMELQEIPEHLIAIGGGYISLEFGQMFRRFGSKVTILEHADRFLAREDEDIAD
                     EIRKILEDEGIEIYTGCDTRRISRSDNGVSVTVKIKDEEKVFTGSHTLIGAGRTPNTD
                     KLNLRKTGVEVNERGHIIVNNKLETTSENIYALGDVKGGPEFTHISYHDHLIIYKNLF
                     EHGNESTDGRLVPYCMFTDPQLGRIGLSEQDARKKAMNIKVAKLPMNYIARAIETSET
                     RGFMKAIIDADTKKILGAAVLGEQGGEMMSMLEIAMMGGLTFETLKTAIFAHPLYAES
                     LNNLFFSVE"
     gene            6026..6988
                     /locus_tag="VEV83_16860"
     CDS             6026..6988
                     /locus_tag="VEV83_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK46853.1"
                     /translation="MITVKHLRKNFARQTAVDDISFTVDEGENLVLLGTSGCGKTTTL
                     KMLNRLIEPSSGEIFINNKNVLEQQREVLRRNIGYVLQNTGLFPHYSVAENIAVVPNL
                     FKWSKEKIKQRTIELLEKLHLSPDQYFSTYPQQLSGGQQQRVGLARALAADPPILLMD
                     EPFGALDPITRTNVRNDFKNLEEFKKKTIVLVTHDVQEAFELGDRICLMDKGRIVQIG
                     IPADLLFKPANEYVKQFFDEQRLQLEYRSVTLRMLWPYLGSSMPEDNSVHQLNGQHNL
                     WQAFEFISNTTDIEKTVVHIRNDDQIKQAGYGALLSAFSDFKKS"
     gene            6989..8557
                     /locus_tag="VEV83_16865"
     CDS             6989..8557
                     /locus_tag="VEV83_16865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HYK46854.1"
                     /translation="MEQKQSFWEFISEQSGKLLDQTIAHIGLTFISLLIAVLIGLPLG
                     ILIAKKRKAAGIILNIAGVLQTIPSIALLGFMIPLLGIGPLPAITALFLYALLPIIRN
                     TYTGIKEVDPSVREAATAMGFSSSQVLTKVELPLAMPVILAGIRTATVINVGVATLAA
                     YIAAGGLGEFIFGGIALNNTNMILAGAIPAALLAIIFDFLLSRVQKINLRKLRTAIWL
                     FPLIILLLSSFYVLPSLDKNSLLAGFTPEFMGRQDGYLGLKSTYKLNMRTVVISDAVM
                     YKAAYDKKLDVISGYSTDGRLKAFDLVVLNDDKTIFPPYYAAPLIRNDVLQKYPEIQN
                     VLNLLSGTINDSIMTELNYEVDEEKQSPENVARNFLIQNKLYKPARKGDQGTIRLGSK
                     IFGEQYILVNMYSMLIKGYTDLNTQTKTGLGGTKICFDALTNNQIDMYPEYTGTGLLA
                     ILQPPSTTVNELIQNRDSVYNYVTQQFNEKYNLTWLKPIGFNNAYALMMRRHESDELN
                     IHSISQLANYVETH"
     gene            8564..9709
                     /gene="egtB"
                     /locus_tag="VEV83_16870"
     CDS             8564..9709
                     /gene="egtB"
                     /locus_tag="VEV83_16870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HYK46855.1"
                     /translation="MNLTEQYNKVRKRSTDICADLQTEDYVVQPIVDVSPPKWHLGHT
                     TWFWEAFVLKQYADTYSEFNSNYNYVFNSYYEAAGARVIRTDRGNLSRPSVADIYKYR
                     EHVDRAMEKFLARELNHELSSLILLGLNHEEQHQELLCTDIKYILGNNPLFPALSTKE
                     RSKSSPSKNEWITINEGVFEIGYEGDGFCFDNELKRHKVFLDEYAICDGLVTNREYLD
                     FMNAGGYKSYQYWHAEGWDWVKNFQVEAPMYWHKIDGKWFNYTLNGLQPVDWDEPVCH
                     VSFYEASAYAAWCNLRLPTEAEWEAAAQKFDWGKRWEWTESAYLPYPGFSKAPGAIGE
                     YNGKFMVNQKVLRGASEVTPPGHSRITYRNFFHPPLRWQYTGIRLAK"
     gene            9729..10697
                     /locus_tag="VEV83_16875"
     CDS             9729..10697
                     /locus_tag="VEV83_16875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HYK46856.1"
                     /translation="MNTSTLSKRKTLFYKDVMEGLHANPKYLDSKYFYDESGDKLFQQ
                     IMQCDEYYLTNCEMEIMQKKAASIVDTFINKGDEFDLIELGPGDCTKSLFLLEELVNR
                     KVRFTFYPIDISSNVISMLEYDLPGKLPGLQVRGLNGEYLAMLKEANVLSKRKKVVLF
                     MGSNIGNMTIDESITFCRQVNGCLSPGDLLFAGFDLKKDPQIILNAYNDSAGITREFN
                     LNLLKRINRELNADFVTAQFKHFPVYNPESGECKSYLVSTCKQRVFIGDTDYIDFGEN
                     ETIYMEISTKYSASVTDEIATLTGFAPVKHFYDSKKWFLDAVWKCL"
     gene            complement(10725..11009)
                     /locus_tag="VEV83_16880"
     CDS             complement(10725..11009)
                     /locus_tag="VEV83_16880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HYK46857.1"
                     /translation="MAKAKKAAKKPARKPNAAFMAPLNPSAQLAEVIGNKPAPRTEIV
                     KKIWDYIKKNNLQDKKNRRMINADAKLRPLFGKEQISMFDLAKIVNQNVK"
     gene            complement(11134..>13077)
                     /locus_tag="VEV83_16885"
     CDS             complement(11134..>13077)
                     /locus_tag="VEV83_16885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HYK46858.1"
                     /translation="TIDPSNYYGITVANGMIGIVSSPEPFKVKDVVLAGAYDLYGRGR
                     VSNFLRSFNLLNMWLEIDKKRLDRKSVSNFTQHIDMRHGAFTTSFDYADKASVTYTYF
                     ALRHLPFTVLMNVTITAKSDINFTAASVMEAPDALRDVENYYNEIDRPHTTISLLTSS
                     AKSPTGKLLMCASNSFLFEEPHGSEPNVIHEMWDNNMHLMKFSKTIAKGTTYTYSVVG
                     SSITSAHHQDPLNEAERMTIFAKLEGKERLMNFHNKAWDSLWTSDIVIDGDPQSQQDI
                     HSMLYHLYSFSREGTGYSLSPMGLSGLGYNGHVFWDADLWMFPALLVMHPDLAKNMVE
                     YRYDRLEEAKRNAFSHGYKGAMFPWESAETGVEETPVWALSGPFEHHITADVALAAWT
                     YYCATQDKEWLREKGWPILSASADFWASRVERNGPGQYDIKNVVAADEWAENVDNNAF
                     TNASAIANLKAAISAAKILGVKVNNDWQNVADNIPILKLDNGVTKEYSTYKDTTIKQA
                     DVNLLAYPLKQITDAAQIKRDLEFYSAKVPESGTPAMTQGIFALLYARLGDGEKAYHW
                     FKDAYEPNLNPPFRVIAETKHGTNPYFATGAGGILQAVLMGFGGLDITPNGIVQIKST
                     LPPGWKSLTLKGIGPENKTYVIK"
BASE COUNT         3735 a         2812 c         2905 g         3625 t
ORIGIN      
        1 aatgaattaa attttctatc cggatagctc caatctcttt cggaagaatc caggaacgcc
       61 acattatttc catacaccct gttaagaaac tgtgccgcgg cagcagagat gacggaatgg
      121 ccgctattgt attcgggaaa aggcggcgtt tgtaaaaaag gtttccagtt ttgatcgata
      181 tataaattga tatacgtctc aggcctgata atatcccaat gatacttggt ccaccagcat
      241 gcgataaaac catcgaacat cgcgattgaa ctacccgtgt aattataaac ggtttgatac
      301 cagtctgcat tcttgtccat acaaactgtt ccgattatct ccatccagtg gcccggggga
      361 gtcattgctt tcgtcgcgaa catcacatga ccttcctggt gcattttgaa tccattgcaa
      421 tcccaaaaat tggcgatcca tttttgcgta tcgtttaatg cattcactgt atcatacacc
      481 tgcttcacaa tgttataaaa tgcactgccg gagtctttgc tgaatggcgg cagtccgggc
      541 attgggaaca tatttgccga atcgagcacc agtggacgaa tggtcatcca tttcggctct
      601 gcggcgtcaa agtaacctgg gggcgtaggc gtccagtggc cttccaaacc tgtaactgta
      661 aattttgcac ccctcgtttt cgcataatta tctttttttg cccacgataa aatggagtcc
      721 gccacggcac tcccgtagct aacagaacta tcgaacattt ctttggtcat gttcgtattg
      781 cgtgcaaggt tttttatcga atcgataagt gcgtccattc tgtcctcgga aaaggtgagt
      841 tgcctgccaa cttttgtcat ggcaacgatc gatgcaaaag gaaaatcaat tttatcaggc
      901 ttagctggcg aaggaatgct gcttaaagat tttattttcc cctgcaatga accgtagtga
      961 gtaccatctt ttgcaagcac ctcgtaagcc gcgagattag agtatgcaaa aatgcgggag
     1021 gcgaccggag gcgtgaatat gtcataaatg ataacgtagt tgagctcgtg catggcttta
     1081 caatagagat ccggatcatg cgttaccatc ttataatctt ttttgttgca tgaacagagg
     1141 aaagcacagc tcatcatcaa catcaaacca aacaaaacaa ctcttttcat tttcaattct
     1201 tatttaattc taaaaaagga ccctgttaag actaacagcg tcttgcttgt attatgagac
     1261 aaaaacataa gatcagtttt attcggcgcc atccgttttt gcacggctga tcgcataacc
     1321 gccaattttt tcaccggttt ccaaaccagc atcgcaatcc atgtgataat gtattccacc
     1381 gtacagtctt gacatcgacg cttcctgtgc catcgcatcg tatgcacctg cgcgcgatgg
     1441 aatgatatgt cctaatatag atgcggccgc cgcgctgaat gtagaatgtc ccgacatata
     1501 cgacgggaaa ttcggcatgc cggtcagcgt tttaatttgc gggttcatct gcgagggcct
     1561 gggatagtaa caataatact tcgtgttcca gcagacgatt gctgcgtcca tcatcgacat
     1621 atttagcaat gcaagatttc gcgcccagcg cacttcactg taattttcat caagaaaatc
     1681 ctggcaggct atataattcc agtgaccagg tggtgtgtag gtgcccgcac catccgccca
     1741 aaactgaata atgcgcgtac gctcctgcgt ggggttcttt gtgtaattgt aaacttcatc
     1801 aacctgattt tgcatttcgg cactatgcgt tgatggaggc gcctgcggcc gaagagaaat
     1861 caccgtaagt gagtcgaaca aaaatggttt cacgtttccg aaaaatggca gcataggagg
     1921 acgggttgga tcttccaaac tatgccacgg tatttcgcct ttggcgcggc atgtactgtc
     1981 aagttgcgcc cattgctcag gggtgccgac tgctttagac gcattgtcag tttttgctct
     2041 cgcgataaag acttgtgcaa ttgaacgacc cagcgcttca ccagctttaa tatcagtacg
     2101 tgtagcggta ccactttcta tcgttgccaa ttcctgttct tcgagtttct gctgaatggc
     2161 agcgatttca gttggaaata acagtttcat catttcagct gtaacgcctg caagcacgcc
     2221 ggcttcagaa ggataagagg gcagatctga ctttccattc agggcaacaa ccatagaatc
     2281 gactttgtat ggtgcaggct gcttatataa cgctttataa tgccaacatg caatcaatgc
     2341 gtcatattga gcaccgctta cataagcgta tgcgcgcgct gcataaggcg gattagaaaa
     2401 agggaactgc ggataattga agggattcag tgaattcgga atcgggtagg tcccatcttc
     2461 attctgatag gcaggtaaat tatgcttcgc caccaattcg cgcataagct cattccacct
     2521 taatacaccg cctgcggccc agtagctgac cttggatcgt tgttctgaag acaagttctg
     2581 ctggtatgct tttatttcat tcaggtcagc aatgtatgcg ggtgaattag tcagcggggg
     2641 aacggcaact gaaaacgtgt ctacgcgcga gagcagcacc ggtttccagc tgccggcatc
     2701 aatatcaaga gaaccaggtt gcaacggccg gagattgtcg gtagttccat gtatctcttt
     2761 actacacgaa taataaatga taggtacaga taatagaatt ataaaagaaa ttaatttttt
     2821 catgagtttg atttgatatt tcataagtta tggttttacg caaagcttgc aagagtgttc
     2881 gacgccagct ttatctttcg ccggcttcgc aaaattgaaa atgtaaaata ctcctccgtt
     2941 gaattgagtc gcttgcccta cgttccttcc cgttagcaca taactgccgc ctccggtaag
     3001 agataatccc ggcacttttt tgaacgtata tttaaagttc acacccgcgg aggtccagtt
     3061 cattttattg ctcgggaaag gcatatcatt acgacgtatg tcaaaaccgc ctaacgtgtt
     3121 attgttatca attatcgctt cagcgatcca gcgcatcgtg cggtaaccgg tcctgaactg
     3181 gaaagaggca acgtcaggca tctccacttc atcggtgtaa tgcatttcag ttgtgtaata
     3241 tgcattccgg ttaatggtta cattgtttcg gtaactataa gtgcccgacg cggttgcaaa
     3301 aaaatcgccg tgctgaatat ctgcgatgag tcgcgctgac aagtttgtgc tgtgtaaacc
     3361 gataccgaga ggaagataat ctcccgaata accggtcaat ggtgtactga aaccgcctac
     3421 cccatatact gccacaaccg atttgccaat tttcttttcg agcggcatcc acttaagcca
     3481 taatgatagg tcctggatac cattatcacc gtgcatcgtt ccagcagatg ctttggtaga
     3541 aatatacggc acaccaaaaa gaaagttcag cttattggta ataccataat tgcccataat
     3601 actgtacatg tttgcagata cagttcccag gttgaggttg tctctcttta aagttccctc
     3661 ccagtagttt ttccagctac tgtggccgta catcgggcct aagcagaagt tttgtttgcc
     3721 catcataatt gcatcagcat cggtttgggc ttcagcataa aattgaatca gagcaaatag
     3781 taaagtgcag gtaattaatt taccagttat caatggttgc attttgttgt ttaaaataaa
     3841 taacggttta aaaaaattga attttgaaca gttaaacgaa taactgtgca cattaaggtg
     3901 ctactcattc aggcagagaa atagataaat aatgaagtgg cttaggcttc cggaggttgt
     3961 tcgggcgtga agccttttcc cggtgacagg gctggtgatg aatgattcga gaacaccgta
     4021 tttatattat ttgaaaagaa aaaactggag gccgtttgaa gcttgtcgta atcgctgatg
     4081 acgagtttca ttacaatact attatcgcct gatttttttt gcgagggcgc attgtttata
     4141 agctcattcg caagcttgaa gaaatcatct ttggcatttt caagatgcgt cttttgttca
     4201 tcgggcaagc acatcaagat caattgtcct tcgtaaactt tttgttttac gtagtggtag
     4261 attttgccat ccagctttat ttcgccatcc gttctttcga aatccttcca gttagttagg
     4321 tagggtaaag aaagtgggac ggtaatagta accaggtcct ggtcgttgta tgcctcatta
     4381 tcaagctgtg cttctaattg cctatcggcc tgctgttgta atgcataaaa caataatctg
     4441 tatcccacaa aattgaatag cagaagaagg agtaatgata ttgccgcaag ctttttcacg
     4501 caagttgtcg ggggcaaatt ataatattaa ttacaagaca caaaaaattt atgttctgtt
     4561 gcatcaatat ttatttactt aaattgtaaa tacaatgaca gtttcggagt gttcaaaagc
     4621 tgatattcgg ttgatattaa aggtgtatta tgaaatctta tgatgctatc gtaataggct
     4681 ccgggcaggg cgggacaccg cttgcgaaga aactcggtaa caagggactg aagacggcca
     4741 tcatcgagcg aaggtgggct ggcggaactt gtatcaacga cggctgcacg ccaacgaaaa
     4801 ctatggttgc atccgcacga attgcgtatc tggctgggcg ggcgaaagaa tttggcttac
     4861 gtcttaatgg cttttccgtt gatatggccg ctgtttataa ccgcaaacaa caggtggttg
     4921 aatcctttcg tatcagttcc gaaaaagggc tgcttgaagt aaaaaatgtt gaactgatct
     4981 atggtgacgc aacatttacg gccaataagg aactggagat cacgttaggt aacgggaata
     5041 aagaaagaat cacagcagag aaaattttta tcaacgtcgg tgccaggcct tctattccaa
     5101 agatcgaagg gctcgatcaa gttgattttc tgacttcaac aagcataatg gaactacaag
     5161 aaattccgga gcatttgata gcgataggtg gtggttatat ttcgctggaa tttggccaaa
     5221 tgtttcggcg gtttggcagc aaggtcacca tcctggagca cgctgaccgt tttctggcaa
     5281 gagaggatga agatattgcg gatgagatca ggaagatcct cgaagacgag ggaatcgaaa
     5341 tttataccgg ttgcgatacc aggcgaatat cacgatcaga taatggcgtc tccgtcaccg
     5401 tgaaaatcaa agacgaggaa aaggttttta ccggctcgca tactttaatt ggcgccggaa
     5461 gaacacctaa cacggacaaa ctgaacctca ggaaaaccgg cgttgaagta aatgagagag
     5521 gccacatcat agtaaacaac aaacttgaaa cgacatcaga aaacatctac gcgttgggtg
     5581 atgtgaaggg tggcccggag tttactcata tttcgtatca cgaccatctc atcatctata
     5641 aaaatctttt tgaacacggt aatgaaagca cggacggaag actggtaccg tactgcatgt
     5701 tcaccgaccc gcaattagga aggatcggac tcagcgaaca ggatgcaaga aagaaagcga
     5761 tgaacatcaa ggttgcgaaa ttgccaatga attatatcgc aagagcgatc gaaacgagcg
     5821 aaacaagagg attcatgaaa gcaattatcg acgctgacac aaaaaaaatt ttaggcgcgg
     5881 ctgtattggg agaacaggga ggagaaatga tgagtatgct tgagatcgca atgatgggtg
     5941 gcctcacctt tgaaacgctg aaaacggcaa tattcgcaca cccgctgtat gcagaatctc
     6001 tcaataattt attcttttcg gtcgaatgat aaccgtaaaa cacctaagga aaaattttgc
     6061 gcggcaaacc gcggtcgatg atatttcttt taccgttgat gaaggtgaga atctcgtgtt
     6121 acttggcacc agtggatgtg gaaagaccac aacccttaag atgctcaacc gccttattga
     6181 accaagctca ggtgaaatat tcatcaacaa taaaaacgtt ctcgagcaac agcgggaagt
     6241 attgagacga aatatcgggt atgtgcttca aaacacgggt ttgtttccac attattcggt
     6301 ggcggaaaat atcgccgttg ttccgaacct tttcaaatgg agcaaagaaa aaataaaaca
     6361 acgcactatt gaattgcttg aaaaacttca tctttcaccc gatcaatatt tctccaccta
     6421 tccccagcaa ttaagtggtg ggcaacagca aagagtgggc cttgcaaggg cgcttgctgc
     6481 agaccctcct atcctgttga tggatgaacc gttcggggcg cttgacccga tcacgcggac
     6541 gaatgtgcgt aacgatttta aaaacctgga agaatttaaa aagaagacga tcgttctcgt
     6601 tacacacgac gtacaggaag cttttgaatt gggcgacaga atttgcctga tggataaagg
     6661 aaggatcgta cagatcggaa tacctgccga cctgttattc aaaccagcca atgaatatgt
     6721 aaaacagttt tttgatgagc aacgtctgca gctcgaatac agatctgtta cactccgcat
     6781 gttgtggcca tatttgggca gcagcatgcc ggaggataac tcagtgcatc aactaaacgg
     6841 ccaacataat ctttggcagg catttgaatt catctcaaac acaactgata tcgaaaaaac
     6901 tgtagtgcac atcaggaacg acgatcaaat caaacaggcg ggatacggtg cgttgttatc
     6961 agcattcagc gattttaaaa agagctagat ggagcaaaaa caaagcttct gggaatttat
     7021 cagcgagcaa tcgggcaaat tgctcgatca gacaatcgct catattggcc ttacatttat
     7081 ttctttgctt atcgcagtat taataggctt gcccctggga attctaatcg cgaaaaagcg
     7141 aaaagctgca ggcatcattt taaatattgc gggtgtttta caaacaattc ccagtatcgc
     7201 tttgcttggg tttatgatac cgttacttgg aattggtcca ttaccagcaa taactgcctt
     7261 gttcctttac gctttgctgc caatcatcag aaacacgtat acaggtatta aagaagttga
     7321 tccgagcgtg cgcgaagccg ctacagcgat gggttttagc agcagtcagg tattaacaaa
     7381 ggtggagtta ccgcttgcaa tgcctgttat ccttgcagga attaggactg cgacggttat
     7441 caatgtaggc gttgcgaccc tggccgcata catcgccgcc ggggggctgg gtgagtttat
     7501 cttcggtggt attgcactaa acaatacgaa tatgatcctg gcaggtgcga tcccggctgc
     7561 cttgcttgca ataatttttg attttctgct gtcacgtgtt cagaaaatta atctaagaaa
     7621 gctgagaacc gcgatatggt tatttccgtt aattattttg ttgctgtcat ctttttatgt
     7681 gctgccttcg cttgataaaa acagtttgct tgccggattt actcccgagt tcatgggcag
     7741 gcaggacggt tatcttgggc tgaagtcgac ttataaacta aacatgcgca ctgttgttat
     7801 tagtgacgcc gtgatgtata aagcagcata tgataaaaag ttggatgtga tcagcggata
     7861 tagcaccgat ggtcgattga aagcattcga ccttgttgtt ctaaatgacg ataagaccat
     7921 ctttccgccc tactatgcag cgccgctgat tagaaatgat gttctgcaaa aataccctga
     7981 aattcaaaat gtccttaact tgttatcggg caccatcaat gattcgataa tgactgagct
     8041 aaactatgaa gtggacgagg aaaagcagtc accggaaaat gtggcaagaa attttcttat
     8101 tcaaaataag ctttataaac cggcgagaaa aggtgaccag ggaacgatac ggctcggttc
     8161 caaaattttt ggcgagcaat acatactcgt aaacatgtac tccatgctga ttaagggtta
     8221 caccgactta aacacccaga cgaaaaccgg attgggagga acgaaaattt gttttgacgc
     8281 gcttacaaat aaccagatag acatgtatcc tgaatacacc ggcaccggcc tgttagcgat
     8341 acttcaaccg ccgtccacaa ctgtaaacga attgatacaa aaccgggata gtgtttacaa
     8401 ttatgtaaca cagcaattca acgaaaaata taatcttacc tggttaaaac cgattggctt
     8461 taataacgca tatgcactga tgatgagaag gcacgagagc gatgaactga acattcattc
     8521 tatatcgcag ttggcaaact atgttgaaac acactaaacg atcatgaatt taactgaaca
     8581 atataacaag gtcagaaaac gctctaccga catttgtgcg gatcttcaaa cagaagatta
     8641 tgtagttcaa ccgatcgttg atgtgagccc acccaaatgg catttaggtc acacgacctg
     8701 gttttgggaa gcgtttgttt tgaaacaata tgccgacact tattctgaat tcaattccaa
     8761 ctataattac gttttcaaca gctattatga ggctgcaggc gcaagagtga tccgcaccga
     8821 caggggaaat ttaagcagac cttccgttgc agacatatat aaatatcgtg agcatgtgga
     8881 ccgggccatg gaaaaattct tagcacgaga gttgaatcat gaactctcct cactcattct
     8941 tctcggtcta aaccacgaag aacaacacca ggaattattg tgtacggata tcaaatatat
     9001 cttaggaaat aatcctttgt tccctgccct ttcgacaaaa gaaagatcga aatcatcgcc
     9061 atcgaaaaac gagtggataa caataaatga aggtgttttt gagattggat atgagggtga
     9121 cggattttgt tttgacaatg agctgaagcg acacaaagtt ttccttgatg aatatgcgat
     9181 ttgtgatggt cttgttacga acagagaata tcttgatttc atgaacgccg gcggttacaa
     9241 gtcttaccaa tactggcatg cggaaggttg ggattgggtt aagaattttc aggtcgaagc
     9301 gcccatgtat tggcataaga ttgacggcaa atggtttaac tatacattga acgggttaca
     9361 gcctgtcgat tgggatgaac ccgtttgtca tgttagcttt tatgaagcat ccgcttatgc
     9421 tgcctggtgc aatttgcgtt tgcctacgga agcagagtgg gaagcagcgg cgcagaaatt
     9481 cgattggggc aaacgctggg aatggacgga aagcgcatat ttgccatacc ccggattttc
     9541 gaaagcaccg ggagcgattg gcgagtacaa tgggaaattt atggttaacc aaaaggtatt
     9601 gagaggcgca tctgaggtta cgccaccggg ccacagccgg atcacttatc gcaatttttt
     9661 ccatccgcca ttaaggtggc aatacaccgg catacgtctc gctaaataaa catctcaaaa
     9721 gcaccatcat gaacacttca acgctttcta aacgcaaaac tctattttac aaagatgtaa
     9781 tggaaggtct tcatgcgaat ccaaaatacc tcgactcaaa atatttttac gatgagagtg
     9841 gcgataaatt gtttcaacag atcatgcagt gcgatgaata ctacctcacc aattgtgaaa
     9901 tggagatcat gcaaaaaaaa gcggcgtcga tcgttgatac ttttatcaac aagggggacg
     9961 aatttgatct catagaattg ggcccgggcg actgcacaaa atcgcttttt ctcctcgaag
    10021 aactcgtcaa cagaaaagtt cgctttacct tctacccgat cgacatttct tcgaatgtaa
    10081 tatcgatgct tgaatatgat ctgccgggga aactacctgg cctccaggtg cgcggtttga
    10141 acggagaata tctcgccatg ctgaaagaag caaatgtgct gtcaaaaaga aaaaaagtgg
    10201 tgttattcat gggaagcaat atcggcaata tgacgataga cgaatcaata acattctgcc
    10261 ggcaggtgaa cggatgtctt tcgccgggtg acctgttatt cgcgggcttt gatcttaaaa
    10321 aggacccaca gataatatta aatgcctaca acgatagtgc aggcattaca cgagagttca
    10381 atttgaattt attgaaacgg atcaaccgtg aactgaacgc cgattttgtt acggcgcagt
    10441 tcaaacattt ccccgtatat aaccctgaga gcggtgaatg taaaagttat cttgtaagca
    10501 cctgcaaaca acgtgtattt atcggcgata cagactacat tgattttgga gagaacgaaa
    10561 ccatttatat ggagatctca acgaaatact ccgcatcggt cacggatgag atagcaacgc
    10621 tcaccgggtt cgcaccggtt aagcattttt atgattcgaa gaaatggttt ttagatgctg
    10681 tatggaaatg cctgtaacaa gccaatcgct cctgaatgca gcaattattt cacattctga
    10741 ttcacgatct tagccaggtc aaacatggat atttgctcct ttccaaataa ggggcgcaat
    10801 tttgcatccg cattgatcat gcgtctattc tttttgtcct gcaggttatt tttcttaatg
    10861 tagtcccaga tctttttaac gatctcagtt cttggcgccg gtttgttgcc aattacttca
    10921 gctaattgag cacttggatt gagcggggcc atgaatgccg cgtttggttt tcttgctggt
    10981 ttttttgcag ctttttttgc ttttgccata attgattaga atttaaagag tcaataatag
    11041 aacttattaa aataaaaaca tcaagatacg caagctttat ataacaagtg taatagttac
    11101 ttacaaataa ttcacattca ctaaaaaacc ggattatttt attacgtacg ttttgttttc
    11161 ggggccaata ccttttaaag tgagcgattt ccatcccggg ggcaatgtac tttttatttg
    11221 cacaataccg tttggtgtta tatcgagtcc gccaaagccc atcagcactg cctgcaaaat
    11281 gccgccggct ccagtggcaa aatatggatt ggtcccatgt ttcgtttcag cgatcacgcg
    11341 aaacggggga ttcaagtttg gctcgtacgc atctttaaac caatgatacg ctttttcacc
    11401 atcacccaat cttgcataaa gcaatgcgaa tattccctgt gtcattgccg gtgtacccga
    11461 ctcgggaact tttgcactat agaattccag gtcccgtttt atttgtgccg catcagttat
    11521 ctgctttaaa ggatacgcaa gtaagtttac gtccgcctgt ttgatcgtcg tgtctttgta
    11581 cgttgaatat tcttttgtca ccccattgtc aagtttaagt atgggaatat tatccgcaac
    11641 attttgccag tcgttgttca ccttcacacc aagaattttt gcagcgctta ttgctgcttt
    11701 cagatttgca atagccgaag cattagtgaa tgcattgttg tcgacatttt ccgcccactc
    11761 atcggcagcc accacgtttt ttatatcgta ttgccccggc ccatttcgtt cgacgcggct
    11821 cgcccaaaag tctgccgagg ccgaaaggat cggccatcct ttttcgcgta accattcttt
    11881 gtcttgtgtt gcacaataat aggtccatgc agcgagcgca acatctgcag taatgtgatg
    11941 ttcgaacgga ccactcaacg cccataccgg tgtttcctca acgccggttt ccgcactttc
    12001 ccatggaaac atcgcgcctt tatacccatg cgaaaaagca ttacgtttcg cttcttccag
    12061 cctgtcatag cggtattcaa ccatgttttt cgcgagatcc ggatgcatga caagtaatgc
    12121 aggaaacatc cataagtccg catcccagaa cacatggccg ttataaccca agccacttaa
    12181 acccatcggc gatagcgaat aacccgttcc ttcacgtgaa aaagaatata agtgatacaa
    12241 catactatgt atatcctgct gcgattgagg gtctccatca atcacaatat cgcttgtcca
    12301 taagctatcc cacgccttgt tgtgaaaatt catcaaacgc tctttgccct caagttttgc
    12361 aaaaatggtc atgcgctcgg cttcattcaa tggatcctgg tgatgcgcgg atgtaatcga
    12421 agaaccgaca accgagtaag tatacgttgt gcctttagca atagtttttg aaaacttcat
    12481 caggtgcata ttgttgtccc acatttcatg gatcacgttc ggttcactcc catgtggttc
    12541 ttcgaacaaa aaactgtttg atgcgcacat cagtaacttc cctgtcggcg attttgcaga
    12601 tgatgtaagc aatgatatag ttgtatgcgg ccgatcaatt tcgttgtaat aattttccac
    12661 gtcccgcaaa gcgtcaggcg cttccatcac gcttgctgct gtaaagttga tatcgctctt
    12721 agccgtaatg gtcacgttca ttagcacggt aaagggcaga tgccgcaggg cgaaatacgt
    12781 gtacgtcacg gaagccttgt ctgcgtaatc aaaggatgtc gtgaacgcgc catgacgcat
    12841 atcgatgtgc tgagtaaagt ttgagacaga tttccgatca agtcgctttt tatcaatttc
    12901 aagccacata ttcaataagt tgaaactgcg gaggaaattg cttacgcgac cacgaccata
    12961 cagatcatat gcacctgcaa gaacaacatc ttttaccttg aatggctcag gagacgaaac
    13021 aataccgatc attccgttgg cgaccgttat accatagtaa tttgaaggat cgatcgt
//
LOCUS       DASQJI010000620         2779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_693916,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000620 DASQJI010000000
VERSION     DASQJI010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693916"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VEV83_16890"
     CDS             <1..395
                     /locus_tag="VEV83_16890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46859.1"
                     /translation="GLRHRWQEGVKSIEGIDHVLPRVGMCCCCVTDEGKEMICSCGYS
                     FANERIEFTEMDENKKTVMNFLLEKTSENKVRLTIDFYVPKDFIEVFEAKEKPQTESQ
                     LERSLVNLEPLLKEITITEDEQSRHANH"
     gene            623..1459
                     /locus_tag="VEV83_16895"
     CDS             623..1459
                     /locus_tag="VEV83_16895"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYK46860.1"
                     /translation="MGFISIILIVANVIVSSKGFKDSFFYDKYKFRVDSVLLYKDYKR
                     MVTSGFLHVNWMHLFFNMLVLVFFSGSLESYLGPVKFLIIYFFSLVGGDALSLFIHRL
                     DWDYESVGASAGVNGIIFAAIALFPGMRIGLFPLPLSIPAWLFGLIYVIYSIYGIRSR
                     RSNIGHDAHLGGALIGLIAAVAMQPSALATNTAAILIVFLPSAAFIYMIVTRPHLLLV
                     DNYFFKKHHNAITVDHKYNIERIDKQKEVDRILEKIHKRGMNSLTQKEKQTLDDYSKA
                     AK"
     gene            complement(1582..2517)
                     /gene="cyoE"
                     /locus_tag="VEV83_16900"
     CDS             complement(1582..2517)
                     /gene="cyoE"
                     /locus_tag="VEV83_16900"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HYK46861.1"
                     /translation="MKKIAAQASLYFILKSKDYLQLMKFTLSFTVVFTCVICYLLAPN
                     VVEYSWPYILLLFAAGLMITGSANAINQAVEKDTDAVMKRTGKRPVASGRMHENEAYA
                     FAIVTGVTGIALMYIFFNPASAILSALSTFIYAFVYTPLKKVSAVAVLVGAFPGALPC
                     LIGWVAATGVVNPFADINVNGTLYSNGAGWALFGIQFLWQFPHFWAIAWLAYQDYARA
                     GFRLLPSHRGPERSTALQTILYSLVMIPVGVLPYVFHLTGNVSLWIVLAANIFLLGQC
                     VRLYFELTPAAARRIMFSSYIYLPVVFLSLLADKI"
BASE COUNT          828 a          620 c          611 g          720 t
ORIGIN      
        1 tggggcttcg gcaccgctgg caggaaggtg tgaaatcaat cgaagggatc gaccatgttt
       61 tgccgcgcgt aggcatgtgt tgctgttgtg taacggacga gggaaaagaa atgatctgca
      121 gttgcgggta ttcttttgca aacgaacgga tcgaattcac cgaaatggat gaaaacaaaa
      181 agacggtgat gaattttctg cttgaaaaga ccagtgaaaa caaagttcga ttgacaatag
      241 acttttatgt gccgaaagat tttattgaag ttttcgaagc taaagagaaa cctcaaacgg
      301 aaagccaact cgaaagatcg ttggttaacc tcgagccgct gttgaaagaa attactataa
      361 ccgaagatga gcagagccga catgcgaatc attaactgat accaaaattt tacttcgatt
      421 cttaatgcgc atcaagcgtt tggctgaaag gttcaataat cctcaaaaat ggcgagaagg
      481 taatgatctc caaagcaaaa aaagattcac tccttcaaag gctgggtctg aaaaaagatt
      541 aggcttcttt ataatcttca taaaaaacca ggaagccttc cctcaaatct ttcgcttttg
      601 tacattgcat caatataaag tgatgggatt tatttcaatc atattgatag ttgccaacgt
      661 catcgtttcc tcgaagggat ttaaggacag ctttttctac gacaagtaca aattcagggt
      721 tgattcggtg cttctttaca aggactataa gcggatggtt acttccggct ttttgcatgt
      781 aaactggatg caccttttct tcaacatgct cgtcctcgtt ttcttcagcg gatcgctcga
      841 atcatattta gggccggtaa aatttctcat catatatttt ttcagcttag tcggcggcga
      901 tgcgctgtct ctttttattc accggcttga ttgggattat gaatctgtcg gtgcttcagc
      961 cggcgtgaac ggaattattt ttgccgcgat cgctttattc cccggcatgc gcatcggatt
     1021 gttcccatta ccgctctcaa ttccagcgtg gctgtttggt ctgatctatg tgatctattc
     1081 gatctatggc atacgttcga gaagaagtaa tatcggtcat gatgctcatc ttggtggcgc
     1141 actcatcggc ctgattgcag cagttgcgat gcaaccgtcc gcgctcgcaa ctaacacggc
     1201 tgctattttg atcgttttcc tgccatcggc tgcctttatt tatatgatcg ttacccggcc
     1261 gcatttgtta ttggtcgaca attatttttt caaaaaacac cataacgcca tcaccgtcga
     1321 tcacaaatac aatattgagc ggatagacaa gcaaaaagaa gttgaccgca tattggaaaa
     1381 gatccacaaa agagggatga atagcctcac ccaaaaagag aagcaaacgc tcgacgatta
     1441 ttcaaaggcg gcgaaatagc gttattcggt tattgggcta ttcggctatt ggttagtttg
     1501 tgtccgacca taatttaatt tgaaatatcg ccggacgcgg ataccccaat aacctaatta
     1561 cctaattgcc caataaacca gtcaaatctt atctgcaagc aacgaaagga aaaccaccgg
     1621 caaataaata taactgctga acataatgcg cctcgcggcc gcaggtgtca gttcaaagta
     1681 aagtcttaca cactgaccaa gcagaaaaat atttgcagcc agcacgatcc ataaactcac
     1741 gttgccggtc aggtgaaaaa cataaggtag tacgccaacg ggtatcataa ccaatgagta
     1801 caagatcgtt tgcagagcag tggagcgttc aggaccgcgg tgcgacggaa gaaggcgaaa
     1861 gccagctctt gcataatcct ggtatgctaa ccacgcgatc gcccagaaat gagggaactg
     1921 ccacaaaaac tgtattccaa acaacgccca gccggcacca ttggaataca gcgttccatt
     1981 tacatttata tctgcaaacg gatttaccac acctgttgca gctacccagc cgatgaggca
     2041 tggcaaagca cccggaaaag ctcccaccaa aactgccaca gcgctcactt tcttaagggg
     2101 cgtgtaaacg aacgcatata taaatgtgct tagcgccgat aaaatagcgg aagccgggtt
     2161 gaaaaaaata tacatcagcg caataccggt aaccccggta acgatcgcga acgcgtaggc
     2221 ttcattttca tgcattctgc cactcgctac gggacgtttc cccgtacgct tcatcacggc
     2281 gtctgtgtct ttctccacgg cctggttgat ggcgttggcg ctgccggtta tcatcagtcc
     2341 ggccgcaaat aaaagcagga tgtagggcca cgaatactcc acgacgttcg gagccaacag
     2401 gtagcatatc acacaagtaa aaacaacagt gaagctgagc gtaaacttca tcagttgcaa
     2461 ataatccttt gatttcagaa taaaatataa cgaagcctgc gcagctattt ttttcacggc
     2521 gtaaatgtca gttaaaaaat aagaaatgag aaatcaggaa tgcgaatgag gaataaggaa
     2581 cgggtagttt ggaaaaagca aatgcggaaa agaaaatgag aaagcaaatc cgcgtgatct
     2641 actttctcat tccttatttt aaatttctta ttccttatcc tcaatggctg gattcatcct
     2701 gaccgatcgg aacattctgc ggaatgtgat ctctgccgtc tttgccataa tcataaggcc
     2761 agcgataaac ttccggaat
//
LOCUS       DASQJI010000621         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_540868,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000621 DASQJI010000000
VERSION     DASQJI010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540868"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1432
                     /locus_tag="VEV83_16905"
     CDS             <1..1432
                     /locus_tag="VEV83_16905"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46862.1"
                     /translation="ILVSNKNSGSATFVFNVCVDHDNFLVVAFQVQKGSSYECWIQRI
                     STEGHLLWGHGVDLGPGLSPYPAALSTNEIAVAWNNNGKVDFQKLSASGVPAWVPYKE
                     FSGINGAPVSRAQVVANVEGRFSMVYQQQFSAPFYTNLYEQRYNNSGVPLWDLPLKIS
                     KLTTVTYRYYDVHADHDTTYVGYYGNPQGSNRFDAYIQRVNPNRTLPYGNNGSAFADY
                     STDTDPSEQTIYIAKREGSNNVWAVCTVTNPFQTKSTIYVQKINALTGGRYFGDFAKS
                     LSSLSSNLTSLAFSRLSLCDDSPIFLATDKSNKLAAVRLNGDGNFAWDKKLQVLGSTS
                     NSKFRYGFTAVVEGQAVAVWQEDKGHGDMAYAQNITCLGHTGPLSPQIPQTNVTQFRN
                     GFSIKNIYPNPARNVLNVTISSSNQTNIRVYVTDVSGHVLLPSQRIMQQGNNLIQLDV
                     SKLRAGTYFIKAANGTLTAAAIFNKQ"
BASE COUNT          471 a          358 c          390 g          420 t
ORIGIN      
        1 cattctcgtg agcaataaaa attcagggag cgcgactttt gtttttaatg tgtgtgtcga
       61 tcatgacaat tttctcgtcg ttgccttcca ggttcaaaaa ggttcgtcat atgaatgctg
      121 gatccagcga ataagcaccg aaggtcattt gctttgggga catggcgttg atcttggtcc
      181 cggtttatca ccttacccgg ctgcgcttag cacaaatgaa attgcagtgg catggaataa
      241 taatggcaaa gtggacttcc aaaaattgag cgcatcgggt gttcccgcgt gggtccctta
      301 taaggaattc agcggaataa atggcgcccc cgtatcgaga gcgcaggttg tcgcaaatgt
      361 agaaggtaga ttcagtatgg tgtaccaaca gcaattttca gcgccattct atacgaattt
      421 atacgaacaa cgatacaaca acagtggtgt acccctatgg gatctgccgt tgaagatatc
      481 aaagctcaca acagttacat atcgttatta tgatgtacac gcagatcatg acacaacgta
      541 cgtagggtat tatggaaatc cgcagggcag caacaggttt gatgcatata ttcaaagagt
      601 taatcccaac agaacattgc catatggcaa caacggcagc gcgttcgcgg attattcgac
      661 agacaccgat ccgagtgagc aaacaattta catcgcaaaa cgagaaggat caaacaacgt
      721 gtgggccgtg tgtacagtaa cgaatccgtt ccagacaaaa agcaccatat atgttcaaaa
      781 aataaacgcc ttgacgggcg gccggtattt cggtgatttt gccaaatcgc tttcatcctt
      841 aagctcgaat ttgacaagcc tcgctttcag caggctttcg ttatgcgatg actcgccgat
      901 ctttttagcg actgacaaga gcaataagct tgcggccgtg agacttaatg gtgatgggaa
      961 ctttgcatgg gacaaaaaat tacaggtgct tggctctacg agtaactcaa aattccggta
     1021 tggatttact gccgtcgtgg aagggcaagc tgttgcagtt tggcaggaag ataaagggca
     1081 tggcgatatg gcgtatgctc aaaacataac atgcctcggc catacaggcc cgttgtcgcc
     1141 gcagatcccg caaacaaatg tcacgcaatt cagaaatggg ttcagcatca aaaatatcta
     1201 tcctaatcct gcgcggaacg ttttgaacgt gacgatcagc tcaagtaatc aaacgaacat
     1261 tcgggtgtat gttaccgatg taagtggaca tgttttgttg ccgtcgcaaa gaataatgca
     1321 acaaggaaat aatttgattc agttggatgt tagtaagctc agggccggaa cttatttcat
     1381 aaaagccgcg aatggcactc taactgctgc cgccatattc aacaagcaat agtaaatcac
     1441 tatagccgtc ggaatttcag tgcttgagcg cgtctataca tacattgctt ctctcagtgt
     1501 gtgaacgcgc tcatcttcca tatactcatc aaagctcatt aaccggtcga tcattccatt
     1561 cggtgtgagc tcgataacgc ggttggcgac cgtttgcata aatgtgtggt catgcgaagt
     1621 gagcagaacg attcccgga
//
LOCUS       DASQJI010000622         1500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1616320,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000622 DASQJI010000000
VERSION     DASQJI010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616320"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VEV83_16910"
     CDS             complement(<1..422)
                     /locus_tag="VEV83_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HYK46863.1"
                     /translation="MSLTCTLIQTKLIWEDAAANRQMLEEKINSIPDKTEVVILPEMF
                     STGFSMQPEKFAETMDGETVQWMKKIAASNKIILTGSLMMKEVAATSEKAATDLYFNR
                     LIWMLPTGEYGVYDKRHLFAYGDEHNHYSSGSKRLIASV"
     gene            complement(422..1162)
                     /gene="kdsB"
                     /locus_tag="VEV83_16915"
     CDS             complement(422..1162)
                     /gene="kdsB"
                     /locus_tag="VEV83_16915"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HYK46864.1"
                     /translation="MKKIAVIPARYASTRFPAKLMQMLGDKTIIRTTYENTVSTGLFD
                     EVLVVTDSEIIFTEITQFGGNAVMSNRAHESGTDRIAEAIEELDYEIILNVQGDEPFV
                     DKKTLWALLNVFADEEANVGSLMHEIYERADIESANNVKVVVDKDLNALFFSRSVIPY
                     VRDKGTTVSYHKHIGIYACRKNILLQFTKWPPGVLEQAEKLEQLRYLENGIRIKMVLT
                     EHASIGIDTPADLELARQYLSQQQNLQA"
     gene            1291..>1500
                     /locus_tag="VEV83_16920"
     CDS             1291..>1500
                     /locus_tag="VEV83_16920"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK46865.1"
                     /translation="MVKYLTAICCLLAVFTDAQKTDEKLEKKITELLKGFHGDVGVYV
                     RDLKHNRIVEINADTVFPTASIVKIP"
BASE COUNT          397 a          337 c          312 g          454 t
ORIGIN      
        1 accgacgcga tcaatcgctt actgccgctg ctgtaatgat tgtgctcatc accgtaggcg
       61 aaaaggtggc gcttatcgta aacaccatac tcgcccgttg gcagcatcca aattaaacgg
      121 ttaaaataaa ggtcagtcgc cgccttctcc gaagtagcgg caacttcttt catcatcagg
      181 ctaccggtga gaattatttt atttgacgca gcaatttttt tcatccattg cactgtttcg
      241 ccgtccatcg tttcggcgaa tttttcgggt tgcatgctga aaccggtcga aaacatttcc
      301 ggtagaatta caacttcggt tttgtccggt attgaattga tcttttcttc cagcatttga
      361 cggttagctg ctgcatcttc ccaaattaat tttgtttgta taagtgtgca ggttagcgac
      421 atcacgcttg aagattttgt tgctgtgaaa gatattgtct cgccagttcc aggtctgcgg
      481 gcgtatcgat cccgatgctt gcatgttcgg ttaaaaccat ctttatgcga atgccgtttt
      541 caagataacg caactgctct aatttttctg cttgctccaa tacaccgggt ggccatttgg
      601 tgaactgaag caaaatattt ttcctgcacg catagatgcc gatgtgtttg tgatatgaaa
      661 cggttgtgcc tttgtcccgc acatacggaa taaccgaacg gctaaaaaat aaagcattaa
      721 gatctttatc gaccacgacc tttacgttgt ttgcactttc aatatcggcc cgctcataaa
      781 tttcgtgcat aaggcttcca acattcgctt cttcatctgc aaaaacattt aacagcgccc
      841 acaacgtttt cttatcgacg aatggttcat ctccctgtac gttcagaata atttcatagt
      901 cgagctcttc aattgcttcg gcgatccggt cggtgccgct ttcatgcgcc cggttgctca
      961 ttactgcgtt gccgccaaac tgcgtgatct cagtaaaaat aatttcacta tcggtcacta
     1021 cgagtacttc atcaaataag ccggtgctta ctgtattttc ataagtagtt cttataatgg
     1081 ttttatcacc cagcatctgc atgagcttcg ctggaaacct cgtggaggca taacgagctg
     1141 gtataacagc gatctttttc acctgcgcaa atgtataaac gaattgcctg aatgataaat
     1201 aaggaagatc aggttaataa ctctgatatc agtcatggcg gagtgcaagg atgaacagac
     1261 atcagtatct tcatcgaaaa tcatttttcg atggttaaat atctgactgc gatctgctgc
     1321 ttactagctg ttttcaccga tgcacaaaag acagatgaaa agctggaaaa aaaaataacg
     1381 gaacttctga aaggatttca tggggacgtt ggtgtttatg tgcgtgattt aaaacataac
     1441 cggatagttg aaataaatgc cgacaccgtt tttccaaccg cgagcattgt aaagatcccg
//
LOCUS       DASQJI010000623         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_541329,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000623 DASQJI010000000
VERSION     DASQJI010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541329"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..805)
                     /locus_tag="VEV83_16925"
     CDS             complement(<1..805)
                     /locus_tag="VEV83_16925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HYK46866.1"
                     /translation="MSANTITIIVFSAVLILALVFDLGLLSKKNKEVTIRQAFRQTVF
                     WVALAFAFFGFMWFEKGRQPAIEYISAYLMEWSLSIDNIFVFILIFTSFSVNKNHYSR
                     VLLIGILMAIIFRILFITVGVALVHRFEWILYLFGAFLVYTGYRMFVTDEDKKFNPET
                     SKPYKFVKKIFPLSMTDGNGKFWIIENGKRVYTTLFVVVMMLASIDLVFALDSIPAVM
                     GISRDSLVIYTSNIFAVLGLRSLFFLLRGAVNKFEYLQQGIAVVLVFIGL"
     gene            complement(827..>2071)
                     /locus_tag="VEV83_16930"
     CDS             complement(827..>2071)
                     /locus_tag="VEV83_16930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HYK46867.1"
                     /translation="VVDQEPQEDKEATLNSAEALLEYKFADAIEKLTRKNVPVIAYTL
                     GNGEAAPQIVNDLIQNLRNQYRLAIFDLKQSYPDPQAINTLLIVKPTQPFTDEDKLKL
                     DQYVMHGGKIIWCIDKLYAELDSLMRSQADFVAFDRNLNLDDILFRYGVRINGDLLQD
                     LNCSKIPLVTGFNADGSPQMKRFPWPYYPFLSSPNNNPVSKNLDRVLSIFPSSIDTIK
                     APGIEKTILLSSDTTSRLLSSPALVSLKKILDEISEANFSTYTNSYVPVAVLLEGKFS
                     SLFANRLTASVKDSVVRSLGKPFLASNEKPTQQIVISDADIVTNAVSQTTGPLPMGEL
                     PFENYRFANREFFLNCVDYLTSNSGIFESRNKDFTLRLLDKRKVADEKTKWQFINIFV
                     PVALIISFGLFYQWRRKNLFSN"
BASE COUNT          602 a          451 c          444 g          574 t
ORIGIN      
        1 tcaggccaat aaaaacaagc acgacggcaa ttccctgctg taaatattca aatttgttta
       61 cggcgccacg cagtaagaag aacaagctgc gcaggccaag tacggcaaaa atgttcgaag
      121 tgtaaattac gaggctgtcc ctcgagatgc ccatgaccgc aggaatagaa tcaagtgcaa
      181 aaacgagatc gatcgacgca agcatcatta cgacaacgaa taacgttgta tatacacgtt
      241 ttccattttc aatgatccag aactttccat ttccatcggt cattgaaagc ggaaagatct
      301 tcttcacaaa tttgtatggt tttgaagttt cgggattaaa ttttttatcc tcgtcggtca
      361 caaacattct gtagcctgtg tatacaagga atgcgccgaa caaatacaag atccattcaa
      421 agcgatgcac gagtgcgacg ccaacagtta taaaaaggat ccggaaaata atagccatca
      481 aaatgcctat aagcaaaacc cgcgaataat ggtttttatt gaccgaaaac gaagtaaaga
      541 tgagtatgaa aacaaaaata ttatcgatac tcaggctcca ttccatcaaa tatgcgctga
      601 tgtattctat tgcgggttga cggccttttt caaaccacat aaacccgaaa aaggcaaagg
      661 ccagcgcgac ccaaaaaacg gtctgcctga aagcctggcg gatggttact tctttgtttt
      721 tcttacttaa taaaccgagg tcgaacacca atgcaagaat cagcacggcg ctgaagacga
      781 ttattgttat tgtattcgca gacatgaggt taacggggat actgttttaa tttgaaaata
      841 gattttttct tctccattga taaaacaagc cgaacgaaat gatcagcgct accggaacaa
      901 aaatattgat gaattgccat ttcgtttttt catctgcgac ttttcgttta tcgagcaggc
      961 gcaaggtgaa atctttatta cgactttcaa aaattccgct attgctggta aggtaatcta
     1021 cacaattcag aaagaattca cggttagcaa aacgataatt ttcaaaaggc agctcgccca
     1081 ttggcaacgg accggttgtt tggctcaccg cgttagtgac aatatcggcg tcgctgatta
     1141 cgatctgctg cgtcggcttt tcgttactcg caagaaatgg tttgcccaaa ctcctgacca
     1201 cggaatcttt tacagacgcc gttaacctgt ttgcaaagag cgagctaaat tttccttcca
     1261 gcaatactgc gacgggaacg taactgtttg tgtaggttga aaaattcgct tcgcttattt
     1321 catccaatat cttttttaaa ctaactaaag caggcgagct taagagccgg ctggttgtat
     1381 cgctcgataa taagattgtt ttttcgatgc ccggcgcttt gatagtatcg atcgatgaag
     1441 gaaaaatcga taacaccctg tccaggtttt tcgaaaccgg gttgttattt ggtgatgaaa
     1501 gaaaaggata atatggccag ggaaagcgtt tcatctgcgg gctcccgtct gcattaaagc
     1561 cggtcaccaa tggtatctta ctgcaattaa gatcctgcaa caagtcaccg ttaatgcgca
     1621 cgccatagcg gaacaaaata tcatccagat tcaggttccg atcgaatgca acaaagtcgg
     1681 cctggctgcg catgaggcta tccagttccg catataattt atcaatgcac caaattatct
     1741 ttccaccgtg catcacgtac tgatccaatt ttagtttgtc ttcatccgtg aagggttgcg
     1801 ttggttttac aatgagcagc gtgttgatcg cctgcggatc agggtacgat tgtttcaggt
     1861 caaagatcgc gagccggtat tgattgcgca ggttttgaat gagatcgttc acgatttgag
     1921 gtgccgcctc accattgccc agtgtatagg cgatcaccgg gacgtttttt ctcgtcagct
     1981 tttctatcgc atctgcaaac ttgtattcaa gcaaagcttc agcagaattg agtgttgctt
     2041 ctttatcttc ctgcggttcc tggtcaacga c
//
LOCUS       DASQJI010000624         4138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2539640,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000624 DASQJI010000000
VERSION     DASQJI010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2539640"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VEV83_16935"
     CDS             <1..1059
                     /locus_tag="VEV83_16935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYK46868.1"
                     /translation="FFLVIIAGTLIGLAIGFIFYAIHRWFPTTSSIEIILTLIAPYCM
                     YYAAEHFHFSGVLAVVGGGLLLSSKRQSMLSYRSRLEGVNVWTNIVFVLNGLIFFLIG
                     LQLPSIIKQLDDTSLATAIGYGLAISFILIVARLICTYGAAIFTRFASHFITVADANP
                     GWKGPMIFGWAGMRGVVSLAAALSIPLLAGGQPFPYRNLILFITFIVILVTLVFQGLT
                     LPWLIRKVKLEHRATEIPEQKQELIIQKKIAEYSLQYLEEKCAYDSSRNQHLRNLRDR
                     LRIDLGALNEALENTEHMNGTSTDKYQQAYLELLDYQRKLLDKMNHKEEFDEDIIRKY
                     LALIDIEEFKVREKLIEE"
     gene            1381..1956
                     /locus_tag="VEV83_16940"
     CDS             1381..1956
                     /locus_tag="VEV83_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HYK46869.1"
                     /translation="MSDGKKDIFERMLAGGLIEIHDPQMSKAWEVIFRAIKLSAALNA
                     ASDVHEVRERLSEITGTQIDKSTTVFVPFYTNFGKHIKLGKNVFINHACSFLDLGGIT
                     IEDDVQIGPRVNLITENHPLEPAKRKLLDLKSILIKRNAWIGAAATILPGVTIGENSV
                     VAAGAVVSKDVPANTVVGGIPAKFIKAIDSN"
     gene            2002..3096
                     /locus_tag="VEV83_16945"
     CDS             2002..3096
                     /locus_tag="VEV83_16945"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HYK46870.1"
                     /translation="METVITSPEGGKTVKSKQVKAFGTEGATAPLQQLDIHRRKPTPH
                     DVEIEILYCGVCHSDLHTARNEWHGTIYPCVPGHEIVGKVVSVGAHVKKFKTGDLAAV
                     GCMVDSCRECDYCNEGLEQYCEPGCTLTYNSPDKYLGTQTYGGYSQSIVVDEAFVLRV
                     PENLDLAATAPLLCAGITTYSPLKHWNIGPGKKVGVVGLGGLGHMGVKLAKAMGAEVI
                     VYTTSASKVEDAKRLGADDVVLSKDEEQMSRYAGTLHFVLDCVSAQHDINAYLNQLRV
                     DGSLALVGAPEHPLPVAAFSLIPYRRSFAGSTIGGIAETQEMLDFCGEHNIVADIEMI
                     NIQQINEAYERLLKGDVKYRFVIDMASLKS"
     gene            complement(3254..4036)
                     /locus_tag="VEV83_16950"
     CDS             complement(3254..4036)
                     /locus_tag="VEV83_16950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46871.1"
                     /translation="MHYSLFFRTDASILSLILLTACIFMVRLGRFIRNKFFRTDQQES
                     KGGVNSLLGALFGLWGFVLAFTFGNAASRFDNVRSMMVDESNAIRNAILRVQTFPDSL
                     RGGLKEDLKNYLQARIDYNSSTDLESLDKAREDAQRFGNSVWSKTARISALPNMGIIC
                     ANMFATLSSMFDVASKRDATLSSGTPDLIMYLLFFLALVISFIGGFTTPVIGTKEWVV
                     ITGFILLACIIIYITLDLSRPMRGFIRPDVGQERIEQLQKMF"
BASE COUNT         1178 a          864 c          952 g         1144 t
ORIGIN      
        1 ttctttctcg ttatcatagc aggaactttg ataggtttgg ctatcggttt tatcttttac
       61 gctatacacc ggtggtttcc cacgacaagc agcatagaaa ttattttaac gctgattgct
      121 ccatactgta tgtattatgc cgccgaacat tttcattttt ccggcgtcct cgccgtagtg
      181 ggtggcgggc ttcttctttc cagcaagcgt caaagcatgc tcagttaccg cagcaggctc
      241 gaaggagtta atgtatggac gaacatcgtg ttcgtattaa acggattgat cttctttctc
      301 atcggccttc aattgccttc gataatcaaa caacttgacg atacaagttt agcgacagcg
      361 ataggatatg gattagcgat ttcttttatt ctcatagttg cacggctaat ttgcacatac
      421 ggcgcagcga tttttactcg ctttgccagc cactttatta ccgtcgctga tgcaaacccg
      481 gggtggaaag ggccaatgat ctttggttgg gcaggcatgc gcggcgtggt ttcactcgca
      541 gcagctttgt caataccatt actcgcaggg ggacagccat ttccttatcg caatctgatt
      601 ctcttcatta catttattgt cattttggtc acgctcgttt tccagggatt aacgctgcca
      661 tggctgatcc ggaaagtaaa acttgaacat cgggccactg aaataccgga gcaaaaacag
      721 gaactcatca ttcaaaagaa aattgctgaa tactcgttgc agtacctgga agaaaagtgc
      781 gcgtatgatt cgagtagaaa tcaacatttg cgcaacctcc gcgaccgttt gaggatagac
      841 ctcggtgcct taaacgaggc gctcgaaaac acagaacaca tgaacgggac atcaacagat
      901 aaatatcagc aagcctacct tgaactcctc gactatcaaa gaaaactgct tgacaagatg
      961 aatcacaaag aggaattcga tgaagatata attcgaaaat acctggcgtt gatcgacatc
     1021 gaagaattta aggtccgtga aaaattaata gaggaatgac attcaaaaaa atgggtggcg
     1081 gcctatttga tcttcttaat tttgccggat gcaaggatcg tcaaagaacc gaaagcgctc
     1141 cttcaacaca ccgactggaa tattgctaat atagcgccgt gcattcggct ttgagtattc
     1201 tgttacttca acaatttctt taaaagatca accggcacaa acccgaaatc tctgaggatg
     1261 caggaggttt gaaattctta agtattggtt tgataattgt tacaaccaag aatagttctg
     1321 gtagaccttt gcaatatttt atcttcacga tgacgcagga agctaaaaaa agaaattgtt
     1381 atgagcgacg gtaagaaaga tatttttgaa agaatgcttg ccggaggatt aatcgagatt
     1441 catgatcctc aaatgtctaa agcgtgggag gtcattttcc gggcaataaa attatccgca
     1501 gcactgaatg ctgcttccga tgttcacgag gtacgcgagc gattgagtga gatcaccggg
     1561 acacaaattg ataagagcac gacggtattt gtgccttttt acacaaattt tggtaagcat
     1621 ataaaacttg gtaaaaatgt atttatcaac cacgcctgca gctttttgga tttgggtgga
     1681 ataactattg aggatgatgt tcagataggt ccgagggtaa acctgatcac agaaaatcac
     1741 ccgctggaac ctgcgaagag aaagcttctt gatttgaaat ccattctcat caagcgcaat
     1801 gcgtggattg gtgccgcagc aactattttg cccggcgtaa ccatcggcga aaattctgta
     1861 gttgcggcag gggcagttgt atctaaagat gtgccggcaa ataccgtcgt gggtgggatt
     1921 cctgcgaaat ttattaaagc aatcgattcc aattaggacg aaagcaatgt tctttttact
     1981 gacaccgaaa aatcaattta tatggaaaca gtaataacat caccggaagg aggaaaaacg
     2041 gttaagtcaa aacaagtaaa agcatttggc acagagggcg cgacagcacc tctgcaacaa
     2101 ctagacattc acaggaggaa acctacgccg catgacgtgg agatcgaaat actatactgc
     2161 ggtgtgtgcc actccgatct tcatacggca agaaatgaat ggcatggcac catctaccca
     2221 tgtgtaccag gtcatgagat cgtaggaaag gtggtaagtg ttggagcgca tgtaaaaaag
     2281 tttaaaacag gcgaccttgc agcagttggt tgtatggttg atagctgccg tgaatgtgat
     2341 tattgcaatg aaggcctgga acaatattgc gaacccggct gtactttaac gtacaactct
     2401 ccggataaat atcttggcac gcaaacgtat ggcgggtatt cacaaagtat tgtcgttgat
     2461 gaagcgtttg ttttgagagt gcccgaaaat ctcgatctcg ccgctactgc accgttgtta
     2521 tgcgcaggca tcaccactta ttcgccgctg aaacattgga atatcggtcc tggtaagaaa
     2581 gtgggcgttg ttgggcttgg cggattaggg catatgggag ttaaacttgc aaaggcgatg
     2641 ggagcagagg tgatcgtata tacgacgtca gcttctaaag ttgaagatgc aaaacgcctt
     2701 ggtgccgatg atgtagtgtt gtcaaaagac gaagaacaaa tgagccgtta tgcaggcacg
     2761 cttcattttg ttttggattg cgtttctgcc cagcacgata tcaacgctta tcttaatcaa
     2821 ttgagagtag acggttcact cgcattagta ggtgctcctg aacacccgct tcccgttgct
     2881 gcatttagtc tcatacctta tcgcaggagc tttgccggtt caactattgg tggcattgcc
     2941 gaaacacagg agatgcttga tttttgtggt gaacataaca tcgttgcaga tatagagatg
     3001 atcaacatcc aacagatcaa cgaagcgtac gagcgtttat tgaagggcga tgttaagtat
     3061 cgctttgtga tcgatatggc ttctttaaaa agttgaaatt ggaccggcag gtgtctgaca
     3121 ctttcaaagt gtctgacacc tatacaccta cagcgtgacc tgatacacag gagagatttt
     3181 taaaaattgc ctgaagacgg cacatgcatt tcatttcgcg actagcattc attttgtttg
     3241 ttgccggcat cagctaaaac atcttttgta attgctctat tcgttcctgt ccaacatccg
     3301 gcctgatgaa acctctcatg ggcctgctaa gatcgagcgt gatgtagatg attatgcaag
     3361 cgagcaaaat gaacccggtg ataacgaccc attcctttgt gccgataaca ggcgttgtga
     3421 atccgccaat gaaactgatc accagtgcaa gaaaaaatag caggtacatt ataaggtccg
     3481 gagtacccga cgataatgtc gcatctcttt ttgacgccac gtcgaacatg ctgctcaaag
     3541 ttgcaaacat gttagcgcaa atgatgccca tgtttggtaa cgcagatatc ctggcggttt
     3601 ttgaccatac actgttccca aatctttgag catcctctct tgctttatct aagctttcca
     3661 ggtccgttga gctgttgtaa tcgatccttg cctgcaaata gtttttcaga tcctctttca
     3721 ggccgcctcg taaactatcc ggaaatgttt gaactctgag gatcgcattt ctgattgcat
     3781 ttgattcatc aaccatcatc gagcgaacgt tatcaaaacg ggaagcagcg ttaccaaatg
     3841 tgaatgcaag cacgaatccc cataatccga acaatgcacc aagcaaagaa ttgacgccac
     3901 cttttgattc ctgttgatcg gtccggaaaa atttgttccg tatgaacctt ccgagcctta
     3961 ccataaaaat gcatgcggtc aacaggataa ggcttagaat ggatgcatct gttcggaaga
     4021 aaagagagta gtgcatttaa atttttttgc tgatgttttt ggttgtcgag taatgccggc
     4081 aggtaaatat aaaaatttac tcattattgt gttgcagttg tattcgcttt agttggtt
//
LOCUS       DASQJI010000625         8398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_389154,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000625 DASQJI010000000
VERSION     DASQJI010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8398
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389154"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VEV83_16955"
     CDS             complement(<1..180)
                     /locus_tag="VEV83_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase"
                     /protein_id="HYK46872.1"
                     /translation="MKQNPVHVSMEPFLQGSVVLIDKPLRWTSFDAVKKIRILTGVSK
                     VGHAGTLDPLATGLLI"
     gene            337..1335
                     /locus_tag="VEV83_16960"
     CDS             337..1335
                     /locus_tag="VEV83_16960"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK46873.1"
                     /translation="MKSYLQATTITLAVSFFFFVSIFPACRKSTSESEVARGFNVNVV
                     RDIKYGSNVNWLGNTEDLYLDVYMPITLESQQTYPLVLFVHGGGFQTGDKAPASTYMK
                     AFAASGYVGVAINYRLGWTNDNSSDCSGDTTEQKEAAYRAIQDTKAALRFMVANAEKY
                     HIDTNHIFMSGASAGAVTVLNAQFLTQAQYNSIIPGAQVKLGGVDNADNALTNTYTIK
                     GICGVSGCVVDSDVVTRSNAIPLILFHGGLDEAVPPGHGYAHGCPNMLLVDGSVSIYN
                     RMAALGKACVLHFDPVQGHIPFTDEFRFNNTLCFFNSILDEQVETGFYPGTESSCP"
     gene            1389..1955
                     /gene="efp"
                     /locus_tag="VEV83_16965"
     CDS             1389..1955
                     /gene="efp"
                     /locus_tag="VEV83_16965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HYK46874.1"
                     /translation="MATTSDISRGMILKLDGSLYTIVEFGENKTARAAAKVWAKLKGV
                     DNSRTIEKTWNSGETIFPVRVEKKAYQFLYKDESGYNFMDNETFEQIALNENMIDAAQ
                     FLKEGGEVFVSINTETDQPIAAELPEKIALKITYTEPGLRGDTATRALKQATIETGAT
                     VQVPLFVNEGEVIRINTRTGEYVERVKD"
     gene            complement(1957..2826)
                     /locus_tag="VEV83_16970"
     CDS             complement(1957..2826)
                     /locus_tag="VEV83_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK46875.1"
                     /translation="MKLYTIDTGFFKLDGGAMFGVVPKSIWNKLNAADENNLCSWAMR
                     CLLIEDEGRLILIDNGIGNKQSEKFFSYYFLHGDVSLERSLESHGFRRDDITDVLLTH
                     LHFDHCGGSIIREGDKLVPAFKNAVYWSNIEHWNWAKYPNDREKASFLKENFLPLEES
                     GQLKFIELPDVEDADTKLVETKFSPNISLRFVSGHTEKMMLPQIRYGNKTIVFMADLL
                     PSIGHIPLPYVMAYDMFPLTTLNEKKIFLQEAVENDYILFFEHDPRTECCTLQQTEKG
                     AREKDKLRLADVG"
     gene            complement(2823..4142)
                     /locus_tag="VEV83_16975"
     CDS             complement(2823..4142)
                     /locus_tag="VEV83_16975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK46876.1"
                     /translation="MQTASKKVINSWAMYDWANSAYNLVITSTIFPAYYDAITTTKDA
                     AGTILSHKVIFLGAEFESASLYNYSIAFAYLVIAVLSPILSSIADYKGNKKAFMQFFC
                     YVGGLACCTLYAFDSSTLGLGIACAILAAIGYCGSLVFYNSYLPEIAAEADRDRVSAR
                     GFSFGYIGSVILQIICFLFVLKPELFGIKDASFAPRLSFLLVGLWWMGFSQITFRNLP
                     KSRPVSQNKDQNIFTNGFRELNKVWQQVKQLPVLKRFLFSFFFYSMGVQTVMLAATLF
                     GSQVLQLPTSKLIICILIIQLVAIAGAYIMAKLSDRFGNFRVLMFVVFLWIGICVAAY
                     YITTETQFYVIASLVGLVMGGIQSLSRSTYSKVMPETHDTASFFSFYDVTEKVAIVIG
                     MFSFGFVSQLTGNMRNSIVALIVFFLIGLIFLFTTLQKQKLQSRLAL"
     gene            4345..6750
                     /locus_tag="VEV83_16980"
     CDS             4345..6750
                     /locus_tag="VEV83_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HYK46877.1"
                     /translation="MKRSIKKVAVLGSGVMGSRIACHFAGVGLQVLLLDIVPNGVDAN
                     AKPAEKNKLVNDALQAAIKSNPSPVYTADAIKRIATGNFDDNLKEVSACDWIIEVVVE
                     RLDVKQGLYEKVEQYRRKGSLITTNTSGIPIHLLAQGRSDDFTKHFCGTHFFNPPRYL
                     RLLEIIPAPETSREVVDFLMHYGDVFLGKTTVLAKDTPAFIANRVGVFGIMAIFNSME
                     KYGLTIDEVDALTGPVIGRPKSATFRTADVVGIDTLVKVAKGVAENCPNDEAAALFKI
                     PGWLEKMIENNWLGDKSGQGFFKKIKVPVTEGSPEERKSDKEIHTLDLNTFEYKPRAK
                     ASFASVKSAQVMESLKPRLKALFAAPDKAGEFYRHFHYSLFSYISHRIPEISDELYRI
                     DDAMMAGFGWEIGAFESWDLFGVASTAEAMKAGGFSVAPWVNEMLAAGNTSFYKTENG
                     RKFYYDVETRSYKPVPSAESFIILENYKNRIVWSNSNAALYDIGDDVVALQWNTKMNT
                     IGSEVLQALNKSIDIAEEKFKGLVIANDGANFSAGANVGMIFMFAIEQEFDELNLAIR
                     MFQNTIMRVRYSGIPVVIAPHGLTLGGGCEMSLHADKIYAAAETYIGLVELGVGLIPG
                     GGGTKEFVLRAADEMHEDEPETITLKNRFFTVATAKVATSAFEGYDLGILRKGHDEVV
                     MNSHRRISEAKNAVLELYDQGYVQPVQRTDIKVLGQSALGALYAGINGMWRANYATDH
                     DVLVARKLAYVMCGGDLSEQTLVSEQYLLDLEREAFLSLCGERKTLQRIEAVIKSGRP
                     IRN"
     gene            6826..7386
                     /locus_tag="VEV83_16985"
     CDS             6826..7386
                     /locus_tag="VEV83_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46878.1"
                     /translation="MRQVSVSLLAFCVFASCNTATTSSEATDDTTATAPTSTNEAVTY
                     AYPVNYSSDFSVGDPNLGKTVLQIWKDFDNNALANHKDAFADSVTMDLADGSHMQGPR
                     DSIIAGATAYRSSFKNVASSIDVITTLKPKGKDESWVCVWGTEVDTHNNNKVDSVSLQ
                     ENWMFNKDGKIAYMLQYNKKPYVAAK"
     gene            7534..7911
                     /locus_tag="VEV83_16990"
     CDS             7534..7911
                     /locus_tag="VEV83_16990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46879.1"
                     /translation="MPDQRTDKQGFSTVNPDEERDMGAKGGPTTSLGNADNAHDVPHP
                     YDEDTQTQLAAKSTKKEKTAETMNDDWKTGVDKNMEQDKSSDNSMNSGGSSNMNRGSS
                     NYKQTTSSGSSMNSKTSSDMDEE"
     gene            complement(8078..>8398)
                     /locus_tag="VEV83_16995"
     CDS             complement(8078..>8398)
                     /locus_tag="VEV83_16995"
                     /inference="COORDINATES: protein motif:HMM:NF027968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase C-terminal domain-containing
                     protein"
                     /protein_id="HYK46880.1"
                     /translation="EGEVELHGFYKTLLTIRKKNKALQESASVLLLQTDQPEVLLYLC
                     RRQYDKVLVLMNLSKQAATFRIDHPALAGQYVDLFSGEPKTMNRKETFNFQPGEYLVC
                     HLTH"
BASE COUNT         2472 a         1796 c         1910 g         2220 t
ORIGIN      
        1 gatcaaaagc cccgtcgcca atgggtccaa cgtgcccgcg tgtcccactt ttgatacacc
       61 ggtcaatatt cgtatttttt ttactgcatc aaacgacgtc cagcgcaatg gcttgtcgat
      121 taaaacgaca ctgccctgca aaaaaggctc catcgaaaca tgaaccgggt tttgcttcat
      181 atgtgaaaaa ataacaaatt cctttctcga tctttatttt tatttaggcg acttttgccg
      241 tcgagagcaa tggtacaggt tttgacataa tcaaaaaaaa ttttggttta aacgttcagg
      301 acaattctgt atctcattaa cgaaaccaag ggatttatga aaagctacct ccaggcaact
      361 acaattactc tggctgtttc attctttttt ttcgtttcga tctttcccgc ctgccgaaaa
      421 agtacgtctg agtctgaagt agcacgaggt tttaatgtga atgttgttcg cgatattaag
      481 tatggctcta atgtgaattg gcttggtaac actgaagacc tatacctgga tgtgtatatg
      541 cccataacgc tggagtcaca acaaacgtat ccgctcgttt tgtttgtaca tggaggtgga
      601 tttcaaactg gcgataaagc gccggcttcc acatatatga aagctttcgc agcatcaggt
      661 tacgtgggcg ttgcgataaa ttatcgtctc ggatggacga acgataactc ttcggattgc
      721 tccggtgata caactgaaca aaaagaagcg gcataccgcg cgatccagga cacgaaagca
      781 gcgttgcgtt ttatggtcgc gaacgccgaa aaatatcaca ttgacaccaa ccatattttc
      841 atgagcgggg caagtgccgg cgctgtaacg gttctgaatg ctcagtttct aacccaggcg
      901 caatacaatt caatcatacc cggtgcacag gtgaagttgg gaggagtgga taacgcagac
      961 aacgccctta ccaacacata tacgataaag ggtatatgcg gagtttccgg ttgcgtggtt
     1021 gactcggatg ttgtaaccag gtctaatgct atccccctta ttctttttca tggaggcctc
     1081 gatgaagccg tgcctcccgg tcatggctac gctcatggct gtccgaacat gctgttagtt
     1141 gatggcagcg tatcaattta taacaggatg gccgctttgg gcaaggcctg cgttttgcat
     1201 tttgatccgg tgcagggcca catacccttc acagatgagt ttcgtttcaa taacacgttg
     1261 tgctttttta acagcattct cgacgaacag gtggaaaccg gtttttatcc gggcactgaa
     1321 tccagttgcc cgtaaaattt ccgattcata gccgaaaccc atacttttgc cgcctcgaat
     1381 ttaaaagtat ggcaacaaca tcagatattt cccgtggcat gatattgaaa ctggacggca
     1441 gtctttatac tatagtggaa tttggtgaaa acaaaaccgc acgtgcagcc gcaaaggttt
     1501 gggcaaaact gaaaggtgtt gacaacagcc gcactattga aaagacctgg aatagcggcg
     1561 aaacgatctt tcctgtaaga gttgaaaaga aagcatacca gttcttatac aaagatgaga
     1621 gcggttataa tttcatggac aatgaaactt ttgaacaaat cgcgctcaat gaaaacatga
     1681 ttgatgccgc gcaatttttg aaggaaggcg gagaagtttt tgttagcatc aacactgaaa
     1741 ctgaccaacc gatcgctgct gagttgcctg aaaagatagc tttaaagatc acttatacag
     1801 agcctggact tcgtggcgat accgctacgc gtgcactgaa acaagccacc atcgaaacgg
     1861 gtgctactgt gcaggtgcct ttgtttgtca acgaaggaga agtgatccgt atcaatacca
     1921 ggacaggcga gtatgttgag cgcgtaaaag actgagttat ccaacatcag ccagccgcaa
     1981 tttatctttt tccctcgcac ctttttcagt ttgttgaagc gtgcaacatt ccgtgcgcgg
     2041 atcgtgctca aaaaaaagta tgtagtcatt ctctacagct tcctgcagaa agatcttttt
     2101 ttcatttaac gtagtgagcg ggaacatatc ataggccatt acatagggaa gaggaatgtg
     2161 tccgatcgac ggcaagagat cggccatgaa gactatcgtt ttgttaccgt atctgatctg
     2221 cggcagcatc attttttcag tatggccgct tacaaaacga agagagatat ttggagaaaa
     2281 tttggtctcg acaagttttg tgtcggcatc ttcaacgtcg ggaagctcaa taaatttcaa
     2341 ttgcccgctt tcttctaacg gtaaaaagtt ttctttgaga aaggaagctt tctcccgatc
     2401 attcggatat ttcgcccagt tccagtgctc tatattgctc cagtataccg cgtttttgaa
     2461 cgccggtacc agtttatctc cttcccggat tatgctgcca ccgcagtgat caaaatgcag
     2521 atgcgttaag agaacgtcag taatatcgtc gcgacgaaag ccatgcgatt ccagcgatct
     2581 ttcaagactt acatcgccat gcaaaaaata gtagctgaaa aatttttcgc tttgtttgtt
     2641 tccgatgccg ttatcaatca agatgagccg tccctcatct tcaatcaata aacatcgcat
     2701 cgcccatgag cataaattgt tttcatcggc agcatttaat ttgttccaaa tgcttttcgg
     2761 cactacgccg aacatagcgc cgccgtccag tttaaaaaag cccgtatcga tcgtgtataa
     2821 tttcataatg ccagcctcga ttgaagtttt tgtttttgaa gtgttgtaaa caggaagatc
     2881 aaacctatca aaaagaatac aattaaagcc acgatagaat tgcgcatgtt gccggtgagc
     2941 tgcgaaacga aaccaaagct aaacatgccg atcacaattg cgaccttttc agtaacatca
     3001 taaaaactga aaaatgacgc agtgtcgtgc gtctcgggca ttacctttga ataagttgac
     3061 cggcttaaag attgaatgcc gcccatcacc agccccacca ggcttgcgat cacatagaat
     3121 tgtgtttctg ttgttatata atacgcggca acgcaaatgc ctatccacag gaacacgacg
     3181 aacatcaaca cccgaaaatt gccaaaacga tctgataatt ttgccatgat ataagcaccg
     3241 gcaatagcaa ccaactggat gatcaaaata caaatgatga gcttcgatgt tggaagttgc
     3301 agtacctggc ttccaaacaa tgtggctgca agcattactg tttgaacacc catgctgtaa
     3361 aagaaaaacg aaaataaaaa tcgtttcaaa acgggtaact gcttaacctg ctgccaaacc
     3421 ttgtttaatt ctctaaaacc gttcgtgaaa atattttgat ctttgttttg cgagactggt
     3481 ctgctcttcg gtaaatttct aaaggtgatc tgcgaaaagc ccatccacca taaacctacg
     3541 agcagaaatg acaaacgggg tgcaaaactg gcgtctttta ttccaaaaag ttcgggcttt
     3601 aagacaaata aaaaacagat gatctgcaaa atcacgctgc cgatatatcc gaacgaaaac
     3661 cctcttgcgc taaccctgtc acgatccgcc tctgctgcaa tttccggcag atatgaattg
     3721 tagaatacga ggcttccgca gtacccgata gcagcaagga tcgcgcaagc gataccgagc
     3781 ccaagcgtgc tgctgtcgaa agcgtacaac gtacaacagg ccaggcctcc gacatagcag
     3841 aaaaactgca tgaaagcttt tttattcccc ttgtaatcgg cgatcgatga taggatcggt
     3901 gacaacacgg ctatcaccag gtaggcaaat gcaatggagt aattatacaa agaagcgctt
     3961 tcgaattcag cgccaagaaa tattacttta tggcttaaga tcgtgccggc cgcatctttt
     4021 gttgtagtaa ttgcatcgta ataggcaggg aatatggtgg aggtaatcac gaggttatac
     4081 gcgctgtttg cccagtcgta catcgcccaa ctgttgatga ctttcttcga agcagtttgc
     4141 attggaacca atttgaaaaa tgaaaatagt agatattgag tagataaaaa attcccgcca
     4201 ctgctcctgc tatgttttat caacgaaaat tatccttata cagggcgcgc gactaaattt
     4261 gcttttcata catactttta ccggtgtgag aaaaagcaaa gtcgattgta gcctttgaca
     4321 gattcattca gaaaaatcat tccgatgaaa cgttcgataa aaaaagttgc cgtgcttggc
     4381 agtggtgtga tgggttcgcg tatcgcatgt cattttgcag gcgtcggttt gcaggtcttg
     4441 ttacttgata tcgttccgaa cggagttgac gccaatgcaa aacctgcaga aaaaaataag
     4501 ctggtaaacg atgctttgca ggcagctatc aaatcgaatc cttcgcctgt gtatacggct
     4561 gatgcgataa agcgtatcgc cacaggcaat tttgatgata acctgaaaga ggtgtcggcc
     4621 tgcgactgga tcattgaagt tgtagtggaa aggcttgacg taaaacaagg attatatgaa
     4681 aaggttgaac aataccggcg caaaggaagc cttatcacaa caaatacttc cgggataccg
     4741 atccacctac ttgcacaggg aagaagcgat gacttcacaa aacacttttg cggcacgcac
     4801 ttttttaacc ctccgcgtta cctgcggttg cttgaaataa ttccggcgcc ggaaacgagc
     4861 agggaagtgg ttgatttcct catgcattac ggtgatgtgt ttttaggaaa aacgacggtg
     4921 ctggcaaaag atacgcctgc gttcatcgca aaccgggttg gtgtgtttgg catcatggcg
     4981 atcttcaatt cgatggaaaa atatggacta acgatcgatg aagtagatgc gctcaccggg
     5041 cctgttattg gcaggccgaa atcagcgaca ttcagaaccg cagatgtagt tgggatcgat
     5101 acgctcgtta aagtagcaaa aggtgtcgca gaaaattgcc cgaacgatga agcagcagct
     5161 ttgttcaaaa ttcccgggtg gctggaaaag atgattgaga ataactggct gggtgataaa
     5221 tccggacagg gtttttttaa gaagatcaaa gttcccgtca ccgaaggaag tcctgaagaa
     5281 cggaaaagcg ataaagaaat tcatacgctc gatcttaaca catttgaata caagccccgg
     5341 gcgaaggctt catttgcgtc agtaaagtcg gcgcaggtga tggaaagttt aaaaccgcgg
     5401 ctgaaggctc ttttcgcggc tcctgataaa gcgggagaat tttatcgtca ttttcattat
     5461 tcgttattct cttacatctc tcaccgcatt ccggaaatca gcgatgaact ttatcgcata
     5521 gacgatgcga tgatggcagg cttcggttgg gagatcggtg catttgaaag ctgggacctg
     5581 ttcggcgttg catcgacggc tgaagcaatg aaagcaggag gcttcagcgt ggcaccatgg
     5641 gtaaatgaaa tgctggcggc tggaaataca tctttctaca agacagagaa tggaaggaaa
     5701 ttttattacg acgttgaaac aagatcctat aagcccgttc cgtcagccga aagtttcatc
     5761 atactcgaaa attataaaaa ccgtattgtc tggagtaaca gcaatgcggc attgtatgat
     5821 attggcgatg acgtggtggc gctgcaatgg aataccaaga tgaacacaat tggcagcgaa
     5881 gttttacagg cgttgaacaa gagcattgac attgcagaag aaaaattcaa gggtcttgtt
     5941 atagccaacg acggcgctaa ttttagtgca ggcgctaatg tcggaatgat cttcatgttt
     6001 gctattgaac aggagtttga tgagctgaac ctggcgatcc ggatgtttca aaacacaata
     6061 atgcgggtac gctattcggg aattcctgtc gttattgcac cgcatggctt aacgttaggt
     6121 ggcggatgtg aaatgagttt gcatgcggac aaaatttatg cggccgctga aacatatatc
     6181 gggcttgtgg aactgggcgt tggacttatt cccggcggcg gcggaacaaa agaatttgtg
     6241 ttgcgcgcag cagatgaaat gcacgaagat gaaccagaga caataacgtt gaagaaccgg
     6301 tttttcactg ttgccacggc taaggttgct acttctgcgt ttgaaggata tgacctcggt
     6361 attctccgca aaggccatga cgaagtcgtg atgaattctc acagaaggat cagcgaggca
     6421 aaaaatgcag tgctcgaatt gtatgaccag ggttatgtac agcctgttca aaggacggat
     6481 atcaaggtgc tggggcaatc tgcgcttggc gctttatatg ctggtatcaa tggcatgtgg
     6541 cgcgcaaact atgcaaccga tcatgatgtg cttgtagcgc gcaaactcgc gtacgtaatg
     6601 tgcggcggcg atctgagcga gcaaacttta gtcagtgagc aatacctcct cgatctcgag
     6661 cgggaagctt ttttaagttt atgcggtgaa aggaaaacgc ttcaaagaat tgaagcagtg
     6721 atcaagagcg gaaggccgat tagaaattag tttcttttga tttagttttt tcatttccat
     6781 attacttacc tttcttccct aaattttaaa atcaaaactt tcaccatgag acaagtatcc
     6841 gtttctctgc tggcattctg tgtgttcgct tcatgtaata ccgcaacaac ttcgtctgag
     6901 gcaaccgacg atacaacagc cactgcacca acatcaacaa atgaagctgt cacctatgct
     6961 tatcctgtta attactcatc ggatttctca gtaggtgacc caaacctggg aaagaccgtt
     7021 ctccagatct ggaaagattt tgacaacaat gctctcgcca atcacaaaga tgcctttgca
     7081 gattcggtaa caatggatct tgccgacgga agccatatgc agggacccag agattcgata
     7141 atcgccggcg caacagccta ccgatccagt ttcaaaaatg tcgcaagttc gatcgatgta
     7201 attaccactt taaaacctaa aggaaaagat gaatcctggg tttgtgtttg gggaacagaa
     7261 gttgacacgc ataataacaa caaggtagat tctgtttcat tgcaggaaaa ttggatgttt
     7321 aataaagacg gtaagatagc ctatatgttg caatacaata aaaagccata cgtcgcagct
     7381 aaataagctt aattcttatt tttgaagaag cgctgcaaag acagcgcttt tttatttgtt
     7441 aaatttcgtt ggaaaaaatt tacattccag cgtataacat ggcatgataa tttgactacc
     7501 taatgtattc gataactctt aaatctttgt attatgccag atcaaagaac agataagcag
     7561 ggtttttcaa ccgtgaatcc cgacgaagaa agagatatgg gcgccaaagg tggcccaaca
     7621 acaagtttag gaaatgctga caatgcacac gatgtgcctc atccctatga tgaggacaca
     7681 caaacgcagc ttgcagcaaa gagcacaaaa aaggaaaaga ccgctgaaac catgaatgat
     7741 gactggaaaa ccggcgtgga caaaaacatg gagcaagata aaagttccga caattcgatg
     7801 aattccggtg gatcatcaaa catgaaccgc ggttcatcaa attacaaaca aacgacctct
     7861 agcggtagtt ccatgaattc aaagacatca agcgatatgg atgaagaata aacataggaa
     7921 caagtagacc taagacttat gtttatgcgt gtcccgccaa atggcgggac atttttttgt
     7981 ggttgccaga ttttcaatta tttatttaaa cgttgaatat ccgaacgctc aatattcatc
     8041 aaatcaatat tcaattttca acggcataca tcaatcacta atgcgtcagg tggcacacca
     8101 ggtattcgcc tggttgaaaa ttaaaggttt cttttctatt cattgttttc ggctcgccag
     8161 aaaaaagatc cacgtactgt ccagccagcg ccggatgatc gatgcggaat gttgccgctt
     8221 gcttactgag gttcatcaat actaaaactt tgtcgtattg acgccggcag aggtagagaa
     8281 gcacctccgg ttgatctgtc tgcaacaata gcacagacgc gctttcctgc aatgccttgt
     8341 tttttttgcg gatcgtaagc agtgttttat aaaagccgtg caattcaact tcaccttc
//
LOCUS       DASQJI010000626        14590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1002766,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000626 DASQJI010000000
VERSION     DASQJI010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14590
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002766"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..963)
                     /locus_tag="VEV83_17000"
     CDS             complement(<1..963)
                     /locus_tag="VEV83_17000"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYK46881.1"
                     /translation="MQISVVIPTCNRKKRLLFLLGCLNKSEFLFHEVIVVDSGDDRLS
                     AAEVTTFNKLLIKYISSERSVCIQRNIGIRTAESSWIFLCDDDVEVPVDYIEKLAGHI
                     NAHAETGAVSGLFLQKQGDEWTAKYPVASFAALCWKYIFKLSMWGEITCRDNLFITRL
                     KRYYVRKGNHISKAGWPVITDFSGDYFKTPLYSLGASLIRRDWLLRSPFDEVLDRHGI
                     GEHYGVITGFPSKTVDVLNTACVYHHEEQSNRIKKSLQYYRRVLTLDYFRRTSAQREV
                     KKFWLLWSLLGNLLMFIGKGNWLMIKATSKVMFAIGSDRNPYCLG"
     gene            1093..2565
                     /locus_tag="VEV83_17005"
     CDS             1093..2565
                     /locus_tag="VEV83_17005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYK46882.1"
                     /translation="MKDRKSILFSHSYFLRLDPKQWKTGQPYPPLGTLYAAAVMREEG
                     YKVALFDTMFCADASEVSTSIEKHEPAYFVMYDDGFNYLTKMCLTNMREAAFRMMKLA
                     KDRGCTVIISSSDSTDRYEEYLNEGADFVLLGEAEVTLKELLYSLDNDEEEPLHIQGL
                     AFKKGDVICKTPRRNVLRFLDGLPFPAWDLVDVRPYKEMWMKSSGYFSLNMATTRGCP
                     FKCNWCAKPIYGNRYNSRSPENVVAELKVLKEKFNFDHIWFCDDIFGLKPNWVHEFAA
                     LVEKEKLAFKFKIQARADLLLQEKYVDALKRAGCENIWMGAESGSQKILDAMDKGITV
                     QQIYAATKLIRQHGMLPSFFIQFGYLGETKKDIQKTIDMINELLPHSIGISVSYPLPG
                     TLFHDKVKADLTERTNWSDSNSMSMLFKNTYQPEFYKQLYNYVHASYRKHRAIRDLRN
                     WDKPFSASLEKLVKQLRLLYYEMRFFVETRRLKRVERFAV"
     gene            2575..3399
                     /locus_tag="VEV83_17010"
     CDS             2575..3399
                     /locus_tag="VEV83_17010"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK46883.1"
                     /translation="MKDNSYMHEQLAAKAFNQQSAVFDKIYAENVIVSYKRKRVRDHV
                     LKNLPPKSSILELNAGTGDDAVFFARLGHTVHATDIAQDMQEKLRLKVEKNHLENLVT
                     TEVCSFTDLERLKEKGPYDLIFSNLAGLNCTPDLDKALQSFNALLKPGGMVTMVIMPR
                     FCLWETMLAFKGNFKTAFRRLKNKNGTPAHIEGVHFFCWYYHPGFLVEQLKGKLELLS
                     VEGLCTLVPPSYFEKFPHKYPRLFNWLQEREGRLKHKWPWKYIGDYYIISFRKPAP"
     gene            complement(3380..4201)
                     /locus_tag="VEV83_17015"
     CDS             complement(3380..4201)
                     /locus_tag="VEV83_17015"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HYK46884.1"
                     /translation="MSGTNLISVIIPMYNAEDTIYSTLSSIKSQTEGKFEIIIVNDGS
                     TDNSLVEVYSFKKAHPELAVIIVDKMHEGVSATRNTGLRIATGDYIAFLDADDEWHPE
                     KTTKQLTVLKEVPEADFVGCLYKPISVRALLKSFEQLKQITSKDMLFKNFFQTSTVIM
                     KRRVFDAVGYFEKTISYGEERHYFLRVSKTFPCMLINENLINYGNGKRAFGQSGLSAN
                     LLQMEIGELKSLVYAYRVLDMPFATCCNAIIFSVLKFMRRVCIVYVGDIVKAPAS"
     gene            complement(4198..5016)
                     /locus_tag="VEV83_17020"
     CDS             complement(4198..5016)
                     /locus_tag="VEV83_17020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46885.1"
                     /translation="MVQSGVLYQLNHFYSIRNDAALIERRLNGNNLAAAHMKKAQSVA
                     RLLSWLPYVRGIAISGSLSKNFADENSDLDFFIITAANRLWIVRIVYSIIYKFASLAG
                     VTHWFCLNYFVDELGLEIKERNIFTAIELSTLMPVRGADVFRSLFHTNNWVEKYLPNY
                     MPNYSCLKEKPASIVKRLAEWAMNFEYGNTLDDKLQVLFQKRFERQTTANKKSEKGLT
                     IGAYEAGKHICKPMPEYFQPMILKKFEERFKMVEQKFHAHLTSLEKILVPNFDE"
     gene            5712..6275
                     /locus_tag="VEV83_17025"
     CDS             5712..6275
                     /locus_tag="VEV83_17025"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK46886.1"
                     /translation="MILDEWRCMAGGDTDAFLTIYERHYQALFSYGFSLTANSELTRD
                     CIQDLFLEIWKKRDAINKEVINVGAYLFTWLRRKIFKELGRLQGEKCTDELIKRFGQN
                     TLSYETLLIAFQQSEEKKQQLRAALSKLSKKQLEIIRLKFFEKLSYAEIAARTSLKQR
                     TVYNLIYEALRRLRESMQLLVLLELPS"
     gene            6504..7520
                     /locus_tag="VEV83_17030"
     CDS             6504..7520
                     /locus_tag="VEV83_17030"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HYK46887.1"
                     /translation="MDKKDFTDFRIEDLLMDESFVNYCLQKNEADEAFWKEWFLRHPE
                     KASLRQEAIEMLQMLSLTLPENEYKAELERIKAGIQTEVIPLTKSLSIVRFLNWKKLV
                     GAAAVLIFCVGGYVLFRQAGSKQPRLTERYNKENIPLVFTLSDNTVVTLASHSTLRYP
                     INFGDEERKVYLRGDAGFIVTHNTSHPFTVYEDDIVVTDLGTKFNVRQQGDSVLVVEL
                     LEGKLQVETVNSSGSPLQSIVLSPSENATYSRYGKKLSKETMNRGAASIPNHFVFRQA
                     DFEEVARQIKHAFGITVINQSKKGAWRFTAEFTNATADEIVENICRVEHLEREARGDT
                     ILIK"
     gene            7543..10941
                     /locus_tag="VEV83_17035"
     CDS             7543..10941
                     /locus_tag="VEV83_17035"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK46888.1"
                     /translation="MPILWSQYYRRVSRVTMLVCFVFIYMAAAQASAVEHLDKVYVNV
                     KTGSNTLLQFFKLVESQTSFFFAYDENDVDVSQRLTLPTGEVLLNVLLDKVSAQARIK
                     FIQNKNTILVNNGVTGLENKKKPLSVKGVVKDGSGNALAGATVNVKGTNTSVLTDNDG
                     NFSIDASDSAILIITFVGYEAQEVSVSGQTVLQVSIQELNKTLNEVVVVGYQTQRRSE
                     LTGAVSIVNVGSLAKSPVGNVDQALQGKASGVRITQSTGQPGEGVAVRIRGVGTINDN
                     NPLFIIDGIPTKDGINFLSANDIESITILKDAASASIYGARSANGVIVITTKGGKKGT
                     PQFNYSGYVGVQTHGDLPAMLNTPEYVQLYNEAVANDNVDITNSTLKRKPIPDTIAMA
                     NTDWLDAIFQEGLIQSHQLSVTGGNEKTLYYISANYFKQEGIILNSWYERYSVRSKLN
                     IDLSDKISIANNITLSYSDRNIIGSSGDGYGGNGGSVVRYALFRTPPIPIFNEDGSYS
                     DLPLYPNFFGDGYNPVALAEKMDNKEKQYRAFGDFYIEYKIMSNLKFKTDVGLDVIMT
                     DAKRFDENYGTNLRINSPSRLTVSSANNINFIWNNTLRYNKTFSGAHNLNMIVGTEAI
                     SNTNTIHGGSDHNFPDQIGSLRYLGNGLNINSQNVFEGKQEWALFSLFGNVNYAYKNR
                     YLLSGSIRRDGSSRFSADNRYGNFFSGSAGWNINNEKWMQDNFQAISRLKLRASFGQL
                     GNQDITNYPWASIIGSGYNYVFGQPQASNSGYTISTRGNGNVKWESSTQADVGLDLGV
                     LDNHLNLTVDYYVKRTSDMLIPIPLPLIGGSATTPYANAGEVENKGLELELNYNNNAG
                     RFHYEINANFATLANKVLLLENGAPIPGGRIDNGVDATLTTVGQPIGSFYLLEMEGIF
                     QNNDDIFKHAYQGSYIRPGDVKFKDQNADGVIDEKDRTFLGSAIPKFIYGLTTNFSYS
                     NFDLSIFFQGAYGNKLYLQVNHDIEGFYRPFNLTQRVYDERWTGEGTSNTMPRVSWLG
                     STNNKTPSSRFLEDGSYVRLKNLQIGYSFSGETMSRWRMKGLRIYVTGENLVTFTKYT
                     GLDPEMHTSDNLNNEPYRGDIAAGIDWGTYPSARSYVIGVNLSF"
     gene            11077..12576
                     /locus_tag="VEV83_17040"
     CDS             11077..12576
                     /locus_tag="VEV83_17040"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK46889.1"
                     /translation="MKKDIVYRGLIALVVFSTTGCKKFLEKDLEGVYPETEFYQTQAQ
                     AILAINAAYQPLAFSTTHNRLWVFGDVASDDAAKGGDPGDQADIGLIDEFNITPINGN
                     LEYEWALLYEGVTRANLVLAKVPPIDMDKDLQARILAEAKFLRAWYYFTLVNIFGDVP
                     VVLEPLNADQLQIPQSPVATIFETVIEPDLIDAATHLPPAYSGTDVGRATSGAATALL
                     AKAYLFEGKWQPAADKADEVIKSGRYSLMPVYNENFNVNFENNSESVFEIQHLTQQAP
                     FTGNVLNQWFAPRVDAGYGFDAPTQSFVDEFEKTASGVYDPRLDYTVGRDSMPWYNGE
                     IFSKDWSPTGYLTKKHQQPFSEIPKNLKGDGNLNYVDIRYADVLLWYAEALNELGRSS
                     EALAPLNEVRKRARESYLYDNTLPGFGTIPDGLLPDVSYTNQVDVRRSLQHERRVELG
                     FEFHRYFDMIRWGETYATQALADKPNFNYSVNKNFPIPQSERDRNKALH"
     gene            12618..13703
                     /locus_tag="VEV83_17045"
     CDS             12618..13703
                     /locus_tag="VEV83_17045"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HYK46890.1"
                     /translation="MKQSLLSFKFLKTAVLFSLLLAIVFAACSKNDSNPPPPPDKTAL
                     QDTIDVAQSLYDGTVEGTKPGQYEVGSKAALQTAIDAGTGVVADAAVTQAQVTSATAN
                     VHAAIETYKSHLIKEISAANLMGFWKFNGNPNDSSGNGRNGVATQGHAYYGAGNPTLT
                     ADRFGRSAMAYHFDNGGNIEVPFTTSLNPQQMSISLWCKKSPGGRTLNADTYTLVSLD
                     RWYGYKLQYQLANKIFFTVRTVRTAGDTGYVNQDDETAVLDNETWYHVVVTFKPGEMN
                     FYINGDLVKSWTGNDAPGNPVALAGPVNFVIGQDLPTSEYSTVDGSDNYVNWGGFFSG
                     DIDDVMFYNVVLDGPQVKSIFENQKSL"
     gene            13758..>14590
                     /locus_tag="VEV83_17050"
     CDS             13758..>14590
                     /locus_tag="VEV83_17050"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HYK46891.1"
                     /translation="MNNFYFFPVVICLRQYIIIVIFFLLSSCTTQQEKNTQLLFWCSN
                     NPREIQFCTAITNNWNNKYPKSVHVQPIPEGQSSEEVILAAVVGKTTPDIYANMWQGN
                     VEMYARAGVLIPLDTLEGFLQFLEERCDSSTIKEITSADGHIYQVPWKVNPFMTFYNK
                     NLFADNGIHDLPTTYSKYLEDAETFKKSVEMKGVQKWFGYTEVKEIWFQRLFNFYPLY
                     LAASGGAPLIKDNRASFDNKYAVEVFRFLQTIYTNGYFSRENLSAANDPFVTQQIATQ
                     FT"
BASE COUNT         4306 a         3054 c         3184 g         4046 t
ORIGIN      
        1 gccaagacaa tatggattcc tgtcagagcc aatagcgaac atcacttttg aggttgcttt
       61 tatcattagc caattgcctt tgccgataaa cataagcaga ttgcctaaca aagaccataa
      121 caaccaaaat ttttttactt cgcgttgagc gcttgttcga cggaaataat caagcgtcaa
      181 cacacgccgg taatattgca aagacttttt aattcggttg gattgttctt cgtgatgata
      241 aacgcacgcc gtattcaaaa catcaactgt ctttgacggg aagccggtta ttactccata
      301 atgctctcct attccatgcc tgtccagcac ttcatcaaac ggcgacctta acagccagtc
      361 tcgtcgaatt agtgaagcac cgagcgagta caatggcgtt ttaaaatagt ctccggaaaa
      421 atcggtgatc acaggccaac ctgctttaga aatatggttg ccttttcgca cgtaatagcg
      481 cttcaacctc gtaataaata aattgtcacg gcaagtgatc tcgccccaca tgctcaattt
      541 gaaaatatat ttccagcata aagcagcaaa ggatgcaacc gggtattttg cagtccactc
      601 atctccttgc ttttgcaaaa agagtcctga aaccgcgccg gtttcagcat gagcgtttat
      661 gtggccggcc aatttttcaa tataatcaac cggcacctcc acgtcatcat cgcaaagaaa
      721 tatccatgac gattcggctg tccggatccc aatgttcctt tgtatgcaaa cggatctttc
      781 agaagaaata tattttatga gcagcttatt aaaggttgtc acttcagcgg ccgacaaacg
      841 gtcgtcgcct gaatcaacga cgatcacttc atggaaaaga aattccgact tgttgaggca
      901 tccaagtaag aacaataacc gttttttacg gttacaggta ggtatcacaa cgcttatctg
      961 catgtcaaca taaaagctcg tcagagcata attaacgctt ttatttatgg cagatacacc
     1021 gtatataata aatttggctt tctgttttac agttttgttc gctgatcaaa acctgaacta
     1081 tacatctgaa aaatgaaaga tcgcaagtca atattatttt ctcactctta ttttttgagg
     1141 ctggatccaa agcaatggaa gaccgggcag ccttatccgc cgctcggtac tttatatgcg
     1201 gcggctgtga tgcgcgaaga gggctataag gttgcgctgt ttgatacaat gttttgcgct
     1261 gacgcttccg aagtgtctac ttctatcgaa aaacatgagc cggcttattt cgtgatgtat
     1321 gacgatggat ttaattacct cacaaaaatg tgtcttacga acatgcgcga ggccgctttc
     1381 cgcatgatga agcttgcaaa agatcgcgga tgcactgtta tcatttccag ctccgattct
     1441 acagaccgtt atgaagaata cctgaacgaa ggagcagact ttgtcttgct cggtgaagct
     1501 gaagtgaccc tgaaagaatt gctttattca ctcgataatg atgaagaaga gccattgcac
     1561 atccagggtc tcgcttttaa aaaaggcgat gttatctgca agacgccacg aagaaatgta
     1621 ctgcggtttt tagatggact tccttttcct gcatgggacc ttgttgacgt acgtccttat
     1681 aaagaaatgt ggatgaagag cagcggatat ttttctttga acatggccac gacacgcggt
     1741 tgtcctttta aatgtaattg gtgcgcaaag ccgatctatg gcaatcgtta taattcaaga
     1801 tctccggaaa atgttgtggc ggaattgaag gtgctcaaag aaaaattcaa ttttgatcac
     1861 atctggtttt gtgacgacat ctttggttta aaaccgaatt gggtacatga attcgccgcg
     1921 ctcgttgaaa aagaaaaact ggctttcaaa ttcaagatcc aggcaagggc agatcttttg
     1981 ctgcaggaaa aatatgtcga cgcgttaaaa agagcaggat gtgaaaatat ctggatgggt
     2041 gccgaaagcg gttcacagaa gatcctcgac gcgatggata aaggcatcac agttcaacag
     2101 atatatgcgg ccacaaaact gatcaggcag cacggaatgc tgccatcatt ctttattcag
     2161 tttggttatt taggcgaaac aaaaaaagat attcagaaaa cgatcgacat gataaacgag
     2221 ctgttgccac acagcatcgg catttctgtt tcgtacccgc tgcccggcac gttgttccat
     2281 gataaggtga aagcagacct cacagaaaga accaactgga gcgattccaa ttccatgagc
     2341 atgcttttta agaacactta ccagccggaa ttttacaaac agctctataa ctatgtgcat
     2401 gcaagttatc gcaagcatcg tgcgataagg gacctgagga attgggacaa acctttttca
     2461 gcgagtcttg aaaaattggt gaaacaactt cggctcttgt actacgagat gagatttttt
     2521 gtggagaccc gaagattgaa gagagttgaa agatttgccg tttaagtttc agcgatgaaa
     2581 gataattctt acatgcacga gcaattagcc gcgaaagctt tcaaccaaca atctgccgtt
     2641 tttgacaaga tctatgcaga aaatgttatc gtttcctaca agagaaaaag agtccgcgac
     2701 catgttttaa aaaaccttcc gccaaaaagt tccatactcg agctaaatgc cggcaccggc
     2761 gacgatgcgg tgttctttgc gcgactcgga catactgtgc atgcgaccga tatcgcgcag
     2821 gacatgcagg aaaaactgcg cctgaaagtc gaaaaaaatc atttagagaa tcttgttact
     2881 acggaagtgt gttcttttac tgatcttgaa agactgaaag aaaaaggccc ttacgatttg
     2941 attttttcaa atcttgccgg tcttaattgt acgccagatt tagataaagc tttacaatct
     3001 ttcaatgcat tgctaaaacc gggtggaatg gtaacgatgg tcattatgcc gcgcttttgc
     3061 ctttgggaaa caatgcttgc tttcaaagga aacttcaaaa cagcgtttcg gcgtttaaaa
     3121 aataaaaacg gaacgcccgc ccacattgaa ggcgtgcact ttttctgctg gtactaccat
     3181 ccaggatttt tggtggaaca actaaagggt aaacttgaac tgctaagcgt tgaaggatta
     3241 tgtactttgg taccgccttc atattttgaa aaatttccgc ataaatatcc gcggttattc
     3301 aattggctgc aggaacggga aggccggttg aaacataagt ggccatggaa atatattggc
     3361 gattactata tcatttcttt caggaagccg gcgccttaac aatgtctcca acataaacga
     3421 tacagaccct gcgcataaat ttcaacacgg aaaaaattat tgcgttgcaa caagtggcaa
     3481 aaggcatatc caaaacgcgg tatgcataaa caaggctctt caattccccg atctccattt
     3541 gcagtaaatt cgccgacagg ccgctctgac caaatgcacg cttgccattg ccgtaattaa
     3601 taagattttc atttatcagc atgcagggaa atgtctttga cacgcgcaaa aaataatgtc
     3661 gctcctctcc gtacgagatc gttttttcaa aatagccaac tgcatcaaac acccgccgct
     3721 tcataataac cgtcgacgtt tgaaagaaat ttttaaatag catatccttt gaagtgatct
     3781 gctttagctg ttcgaaactc ttcagcaatg cacgaactga aattggttta tacaagcacc
     3841 ctacaaaatc agcctcaggt acttctttaa gtacagtcaa ttgtttagtt gttttttccg
     3901 gatgccattc atcgtccgca tcaagaaaag caatgtaatc gcccgttgcg attcgaagtc
     3961 ctgtgttcct tgtggctgaa acgccttcat gcattttgtc tacgattata acagcgagtt
     4021 cagggtgcgc ctttttaaat gaatacactt caacgagcga gttgtcggtt gatccgtcat
     4081 tcacgatgat gatctcaaac ttcccttcgg tctgcgactt tatagaactt agtgttgaat
     4141 aaatagtgtc ctccgcattg tacattggga tgataacgct gatcaggttt gttccgctca
     4201 ttcatcaaaa tttggtacta aaattttctc caggcttgtt aggtgtgcgt ggaatttttg
     4261 ttcgaccatc ttaaatcgct cctcgaactt ttttaagatc attggttgaa aatattccgg
     4321 catcggtttg catatgtgct tgccggcttc gtaggcgccg atcgttaatc ctttttcgct
     4381 tttcttattt gctgtcgttt gcctttcaaa tcgtttttga aataatacct gcaatttatc
     4441 atccagtgta ttcccatatt caaaattcat agcccattcg gctaagcgct taacgattga
     4501 ggccggcttt tctttcagac aactgtagtt gggcatgtaa ttaggcagat atttttccac
     4561 ccaattattt gtgtgaaaca aactgcggaa aacatccgcc cccctcacag gcatgagcgt
     4621 tgataattct attgcagtaa aaatattgcg ttctttgatc tcaaggccga gctcatcaac
     4681 aaaatagttc aggcaaaacc aatgcgtcac gcctgcaaga gaagcaaatt tgtatattat
     4741 cgagtaaact atgcgcacta tccataaacg gtttgctgca gtgatgataa aaaagtccag
     4801 gtctgagttt tcatcggcaa aattcttcga caaagagccg gagatcgcaa tgcctcgcac
     4861 gtaaggcagc catgacaaga gccgcgcgac tgactgcgct ttcttcatgt gcgctgcggc
     4921 aaggttgttg ccgttcaaac ggcgttctat caacgctgcg tcatttctta ttgaatagaa
     4981 atgattgagc tggtacaaga ctcccgactg taccacagct tttaatgcag cgacaatgtc
     5041 gagttcactc gcgggccggt cgagaaaaaa agtgatctcc tcaaacgtta ccggataaga
     5101 aaaaatgtca aaataagcaa cgaccttcag aatactcttc tgcagggagt ggtcgtccgt
     5161 tacttgtata gctggttgct gtatgatgga attatttttt tatttaacga ccattcgtta
     5221 gagatagttg ccttactttt ttctttattt ttttataaca tcctgaataa aaagtaaaaa
     5281 tacggcagcc tggctaaatt ttccgaaatg acggtcaggg aataaaagat ccgttgttct
     5341 gatctgtgcg tgttagttag ttggcgaaaa cacccctctg ctgcttttcg gatcggaaca
     5401 aatgttttcc gtttgaggtc gaacttttga ggttccgctc aaactcaaat cgcagatctc
     5461 aaaagttaat tcgctctggc agctccgttg aatagagcaa cacgcttgta cgcccgtgtt
     5521 tgtttcactc agaccacaga gaaagcttca atttacgttg cgcttttatt ttttacagaa
     5581 catctcgttt caattcaacg gcaagcgcag acatgtaaaa tcatttattt ccaccgttga
     5641 aattgttgta cattgtgtgt aattaacgaa catcatactt attaaaatcg atgtctcaat
     5701 gattcctgca aatgatattg gacgagtgga ggtgtatggc gggtggcgac acagatgctt
     5761 ttcttaccat ttatgaacgc cactatcagg cactgttttc ttacggcttt tcgcttaccg
     5821 caaatagcga attgaccagg gattgtatcc aggatttatt tcttgagata tggaaaaagc
     5881 gagacgcaat taataaagag gtaatcaatg taggtgctta cctgtttacc tggctccgcc
     5941 ggaaaatatt taaagaactc ggccgcctgc agggcgaaaa atgcacagat gaactgataa
     6001 aacgttttgg gcagaacaca ttgtcttatg aaacgctcct aattgctttt cagcaatcgg
     6061 aagaaaaaaa gcaacaactt cgtgcagctt taagcaagct ttcaaaaaaa caactggaga
     6121 tcattcggct aaaattcttt gaaaaattaa gctatgcaga aatagctgca agaacgtcgc
     6181 ttaaacaacg tacggtttac aatcttatct acgaagctct acgccgtttg agggaaagta
     6241 tgcaactgct tgttctttta gaattacctt cttgaaattc tgcaacccgg ttttgtgtcg
     6301 cagccggttt agattcacag ttaaattgta atggcgcacg catactatgt agttccggat
     6361 gcgtgaaatg attcgaatat ttatttgact gaaaccttga acttcccccc ggaaaaatat
     6421 atttccgaaa tacccggtaa aattctaaca cgtaccccac tagtataagg acccttcgcc
     6481 tgccttgcta caaattaaac taaatggata aaaaggactt tacggatttc cggatagaag
     6541 atcttctaat ggacgagtct ttcgttaact attgccttca gaaaaatgaa gcggacgagg
     6601 ctttttggaa agaatggttt ctacggcatc ccgaaaaagc ttccttacgg caggaagcaa
     6661 tagagatgct tcaaatgctt tcgctgacgc ttcccgaaaa tgaatacaaa gcagaattag
     6721 agcgaataaa ggcgggaata caaacggagg ttatcccgtt gacaaaatct ctttctattg
     6781 tgcgttttct gaactggaaa aaattagtcg gtgctgctgc tgttctgatc ttttgtgtcg
     6841 gtggttacgt gctattccgg caggcaggtt cgaaacagcc gcgtttaaca gaaagatata
     6901 ataaagaaaa cattcccctg gtttttacct tgagcgacaa cacggttgtg acgcttgctt
     6961 cgcacagcac attgcgttat cccataaatt ttggagatga agaacgaaaa gtttacctgc
     7021 gcggcgatgc cggttttatt gttactcata acacctcgca cccttttacg gtttatgaag
     7081 atgatatagt cgtcaccgat ctggggacca aattcaatgt aagacagcag ggcgattcgg
     7141 ttttggtggt tgaattattg gaaggaaaac tccaggtgga aactgttaac tcatcaggtt
     7201 caccgctgca atcgatagta ctaagtccca gtgaaaacgc aacatattca cgctatggga
     7261 aaaagttatc taaagaaacg atgaaccggg gcgctgcttc tataccgaat cattttgtat
     7321 ttcgccaggc agattttgaa gaagttgccc ggcaaattaa acatgcattt ggtattacag
     7381 tgatcaatca aagcaaaaaa ggggcctggc gttttacggc cgaattcacc aatgccactg
     7441 cagatgaaat tgtagaaaac atttgccggg tcgaacattt agagcgcgaa gcaaggggag
     7501 atacgatctt aattaaataa cgaatataaa aatcaagctg ccatgccaat tctttggtct
     7561 caatattacc ggcgcgtttc cagagtaacc atgctcgttt gttttgtttt tatatacatg
     7621 gctgccgcgc aagcaagtgc cgttgaacat ttggataaag tttatgtgaa tgttaaaaca
     7681 ggcagtaata ccctgttaca attttttaag ctggtagaaa gccagacgtc gttctttttt
     7741 gcgtatgatg aaaacgatgt tgatgtttct cagagactaa ccttaccaac cggtgaagta
     7801 cttttaaatg ttttgctgga taaggtctct gcacaggcaa gaataaaatt tattcaaaat
     7861 aaaaatacaa ttcttgtcaa caacggggta acggggcttg aaaacaagaa aaagccatta
     7921 tcggtaaaag gtgtggttaa agacgggagt ggcaacgcgc ttgccggcgc cacagttaat
     7981 gttaagggaa caaacacaag tgtgttaaca gataatgacg gtaatttttc tatcgatgcg
     8041 tcagacagcg caattctaat aataactttc gtcggttatg aagcacagga agtttctgtt
     8101 agtggacaaa ccgtattgca ggttagtatc caggagctta ataaaacctt gaatgaggtg
     8161 gttgtagtgg gttatcaaac ccaaaggcgt tcggagctca cgggtgctgt ttcaattgtg
     8221 aatgttggaa gtcttgccaa atcacccgtt ggaaatgttg accaggcgct gcagggaaaa
     8281 gcatcgggtg ttcgtattac gcaatctact ggtcaacccg gtgaaggggt tgcggtaaga
     8341 atacgcggcg tgggtacgat caatgataat aacccgctct tcatcatcga tggcatcccg
     8401 acaaaggatg gtattaattt tctttcggcg aacgatattg agtccatcac tatattaaaa
     8461 gatgctgcct ctgcatctat ttacggtgcg cgttctgcca atggtgtgat tgtaattacc
     8521 accaaaggcg gtaaaaaagg aacacctcag tttaattatt caggatacgt gggcgtacaa
     8581 acgcatggag acttacctgc catgctgaac acacccgaat atgtacaact atataatgaa
     8641 gcagtggcga atgataacgt ggatattacg aattctacat taaagcgcaa gcccatacct
     8701 gacactattg caatggctaa tacggattgg ttagatgcaa ttttccagga aggactgata
     8761 caaagccacc agttatcggt tacaggcggc aacgaaaaaa ccttgtatta catttcggct
     8821 aactatttta agcaggaagg aatcattctt aactcgtggt atgaacgtta ctccgtgcgc
     8881 tcaaaattga atattgacct cagtgataaa atcagcattg caaataatat cacgctctcc
     8941 tattctgaca gaaatatcat tggcagctca ggcgatggtt atggcggcaa tggtggaagc
     9001 gttgtgcgtt atgctttatt tcgcacacct cctataccca tctttaatga ggatggcagc
     9061 tactcggatc ttcctctgta tcccaatttt tttggtgacg ggtataaccc cgtagccctt
     9121 gcagaaaaaa tggataacaa ggaaaaacaa tatcgtgcgt ttggagactt ctacatcgaa
     9181 tataagatca tgagcaattt gaagtttaaa acagatgtcg gcctggacgt catcatgaca
     9241 gatgcaaaac gttttgatga aaactacgga acaaatttac gtatcaacag cccgagcagg
     9301 ctgaccgtaa gcagcgccaa caatataaac ttcatctgga ataatacact caggtataat
     9361 aaaacattta gcggcgctca caatttaaat atgatcgttg gtacggaagc gatcagtaat
     9421 acaaacacaa tacacggcgg ttcagaccac aattttcctg accagatagg cagtctccgt
     9481 tatttaggca acggtctaaa catcaattcg caaaatgtat ttgaagggaa acaggaatgg
     9541 gcgctttttt cactttttgg aaacgtcaac tatgcatata aaaaccgcta cctgctatcc
     9601 ggtagcataa gacgggacgg ctcttcacgt ttctcagctg acaacaggta cggtaatttc
     9661 ttttccggtt cggctgggtg gaatataaat aatgaaaaat ggatgcagga taatttccag
     9721 gctatttcaa ggcttaaatt aagagcaagc tttggacagt taggcaacca ggatattact
     9781 aactacccgt gggcgtctat tatcggcagc ggatacaatt atgtttttgg tcaaccacag
     9841 gcaagcaatt ctggttacac catttcaacg cgcggaaacg gaaatgtgaa atgggaatct
     9901 tctacccagg ctgatgtagg cctcgacctt ggtgtattgg acaatcactt gaacctgacc
     9961 gtagactatt acgttaagag aacttcagat atgctgattc ctataccgtt gcctttaatc
    10021 ggcggcagcg cgacgacgcc ttatgctaat gcaggtgaag tggagaacaa aggcctggaa
    10081 cttgaactga attataataa taacgccggt cgtttccact acgagatcaa tgcaaacttt
    10141 gcgacactcg ccaataaagt tttattgctt gaaaatggtg cacccattcc gggtggacgg
    10201 attgataatg gtgtggacgc aacactaacc accgtaggtc aaccaattgg ttcgttttat
    10261 ttactcgaga tggaaggcat tttccaaaac aatgacgaca tattcaagca tgcgtaccag
    10321 ggctcttata taaggccggg cgacgtaaaa tttaaagatc aaaacgccga cggagtcatt
    10381 gatgaaaagg acagaacgtt tttaggaagt gcgataccca aatttattta cggattaacg
    10441 acaaactttt catacagcaa ttttgatctc tccatttttt tccagggtgc ctacggtaat
    10501 aaattatacc tgcaggtaaa ccacgacatt gaaggatttt atcgcccctt caacctgacc
    10561 caacgtgtat acgacgagcg ctggaccggc gaaggaacca gtaatactat gccaagagtt
    10621 tcctggctgg gatcaaccaa taacaaaacg ccttccagtc gtttcctgga agacggctcc
    10681 tatgtgcggc taaaaaacct gcagataggt tacagcttct ccggcgaaac gatgagcaga
    10741 tggcgtatga aagggttacg gatttatgta acgggagaaa acctggtaac attcacaaaa
    10801 tataccggac ttgatccgga aatgcacacg agtgataacc tgaataatga accatatcgc
    10861 ggagatattg cagcgggtat cgattgggga acctatccaa gcgcccgcag ctatgtgata
    10921 ggtgtgaatc ttagtttttg aaaccgaaaa aaatgctgaa aatattttgt gcgtctttct
    10981 gtgggcagtg agtgtttaat tactcagaag tcaccacgca caatcaatgt ttccagcttc
    11041 aaaagatatg aagtaaaaaa cgcaaatgat ttaccaatga aaaaagatat tgtttaccgc
    11101 ggattaattg cactcgtggt gttttcaaca accggatgca aaaaatttct tgaaaaagat
    11161 ctggaaggag tttatccgga aacggaattt tatcaaacgc aggcgcaggc aatattagcg
    11221 attaatgcgg cttaccagcc tttggctttt tctactactc ataatcgttt atgggtgttt
    11281 ggcgatgtgg cgtctgatga tgcggcgaaa ggcggtgatc caggtgacca ggcggacatt
    11341 ggtttgatcg atgagttcaa tatcacgcca attaacggca acctggaata cgaatgggcg
    11401 ctcctctatg aaggtgttac ccgtgctaat cttgtgttgg caaaggtacc gccgatagat
    11461 atggacaaag atctccaggc gagaatttta gccgaagcga aatttttgcg tgcctggtat
    11521 tactttacgc tcgttaatat tttcggcgac gttccggttg tgctcgagcc actaaatgcc
    11581 gatcagttgc agatacctca atccccggta gcaacaattt ttgaaacagt tatcgagcca
    11641 gaccttattg atgcggcaac acatcttccg cctgcttatt cgggaaccga tgtgggccgt
    11701 gctacttctg gcgccgccac cgctttattg gccaaagcat atttgttcga gggtaaatgg
    11761 caaccggcag ctgacaaggc cgacgaggta attaaaagtg gccgctacag tttaatgccg
    11821 gtgtataatg aaaacttcaa tgtaaacttt gaaaataatt cagaatctgt atttgaaatt
    11881 cagcatttaa ctcaacaggc tccattcacc ggcaatgtgc tgaatcaatg gtttgctcca
    11941 cgtgttgacg caggatacgg attcgatgcg ccaacgcaga gttttgtaga tgaattcgag
    12001 aagactgcct ccggagttta tgatccaaga ttggattaca ctgttgggcg cgacagtatg
    12061 ccctggtaca atggtgaaat attcagcaag gactggtctc ccaccggtta tttgactaaa
    12121 aagcatcagc aacctttttc ggagatccct aaaaatctaa aaggcgacgg aaatctcaat
    12181 tatgttgaca tacggtacgc cgatgtgctc ctttggtatg cggaagcgct caatgagttg
    12241 gggcgcagct cagaagcatt agcgccgctt aatgaagtta gaaaacgtgc aagggaaagt
    12301 tacctgtatg ataataccct gcctggcttt ggaacaattc cggacggtct tttaccggat
    12361 gttagctaca ccaaccaggt agatgtgcgg cgctctttgc aacacgaaag gcgtgtagag
    12421 cttggcttcg aatttcatcg ctatttcgac atgattcgat ggggagaaac ttacgctaca
    12481 caagcattgg cagacaagcc aaattttaat tattctgtaa acaaaaattt tccgataccg
    12541 caaagcgaga gagacaggaa caaagccctg cattaatacg ctttcatttt tttaaacaat
    12601 caaaaaatta gattatcatg aaacaatcac ttcttagttt taagtttctt aagaccgcag
    12661 tcttatttag tttactctta gcaattgttt ttgctgcatg cagtaagaat gattccaatc
    12721 cgccaccacc acctgataaa accgccctgc aggatacgat tgatgtagca caatctttat
    12781 acgatggaac tgtagaaggc accaagcccg ggcagtatga agttggttca aaagctgccc
    12841 ttcaaacggc aatagacgcg ggaaccggag ttgtggccga tgcagcagtt acacaagcac
    12901 aggtaacaag tgcaaccgct aatgtccacg cggcgataga aacttataaa tcacatctta
    12961 ttaaagaaat ttcagcagcc aacctgatgg gattctggaa attcaatggt aatccaaacg
    13021 actcatccgg gaacggccgc aacggtgttg ctacacaggg acacgcttat tacggagctg
    13081 gaaatcctac ccttacagcc gatcgttttg gacgctcagc gatggcatat cattttgaca
    13141 atggaggtaa tatagaggtg ccttttacta cttcgctcaa tccacaacag atgtctatca
    13201 gtctttggtg taaaaaatca ccgggcggtc gaacattaaa tgcagatacc tacactttgg
    13261 tgtctttgga ccgttggtat ggttataaac tgcaatacca gcttgccaac aaaatattct
    13321 ttacggtcag aactgtacgt actgctggag ataccggtta cgttaatcag gatgatgaaa
    13381 ctgctgtatt ggataacgag acctggtatc atgtggtagt tacttttaaa ccgggtgaaa
    13441 tgaattttta tattaatggt gatttagtaa aatcatggac tggcaatgat gcacctggta
    13501 atccggtagc gttggcaggc cctgttaatt tcgtaatagg ccaggattta cctaccagtg
    13561 aatactcaac agttgatgga agtgataact acgtaaattg gggcggcttc ttttcgggag
    13621 acatagacga tgtaatgttt tataacgtag tattggatgg tccccaggtt aaatcaattt
    13681 ttgaaaatca aaaaagtctt taacttttaa gcatcccgtc ggaaaaaccc cacagcctct
    13741 tacctgtggg gtttttcatg aacaattttt atttttttcc cgtggttatt tgtttgcgcc
    13801 agtatattat catcgtcatt ttctttctat tgagttcctg cacaactcag caggaaaaaa
    13861 atacgcagtt actgttctgg tgttctaata atccgagaga aatacagttt tgcacggcca
    13921 tcacaaacaa ctggaacaac aagtatccaa agtcagttca cgtgcagccc atccccgaag
    13981 ggcaatccag cgaagaagta attcttgccg ctgttgttgg aaaaacaaca cccgacattt
    14041 atgcgaacat gtggcagggt aacgtagaga tgtatgcacg cgcaggtgtg ctgatcccgc
    14101 ttgatacgtt agaaggtttt ctgcagttcc ttgaggaacg ttgcgacagt tcaactatta
    14161 aagagatcac atctgctgat ggccatatct accaggtgcc gtggaaagta aatccattca
    14221 tgacgtttta taataagaac ctttttgcag ataacggaat tcacgattta ccgactacat
    14281 acagcaaata cctggaagac gctgaaactt tcaagaaaag cgtcgagatg aaaggcgtgc
    14341 aaaaatggtt tggttacact gaagtaaagg agatctggtt ccaacggctt tttaatttct
    14401 atccgctgta tctcgctgct tccggcggcg ctccgctgat aaaagataac agggcctcgt
    14461 ttgacaacaa atatgccgtt gaggtttttc gatttttgca gacgatatat acgaatggct
    14521 atttcagccg ggaaaattta tccgcggcca acgatccttt tgttacacag caaatcgcca
    14581 cgcagttcac
//
LOCUS       DASQJI010000627         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1771393,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000627 DASQJI010000000
VERSION     DASQJI010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771393"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2211)
                     /locus_tag="VEV83_17055"
     CDS             complement(<1..>2211)
                     /locus_tag="VEV83_17055"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46892.1"
                     /translation="IGLSTGLACVILILLWVADEVNINKFNQNDDRLYQVEQVTSDGN
                     AAIPNTPGVLAASLKKEMPEVEDAASVIPSTWFSNKGLFSFHDQHIRADAEFVSGDYF
                     KIFPLDFADGNENQLYASKNNVAISRQLALKLFGTTTNIIGKSIEWNQENFNGDYLIV
                     GLFEKLPSNSTIQADAIFNYAQFFEKNPKLLKWTNNDPSTYVLLKKGTDASAFNKKIA
                     EFVKRKSDESKEVLFAQRFSDTYLYNHYENGVPSGGRIEYVRLFSVVAILILFIACIN
                     FMNLSTARALNRIKEAGIQKIVGATRRSLIVQYMSESVLMAFLSLLLSIGIVKLLLPV
                     FAQITDKHLTLHFDGGMPLALIAVTFITGIISGCYPALYVSAFRPASILKDKLKSGGG
                     EGGVRKGLLVFQFSISIILIVAVMVIYRQMQLIQTTNLGYNREHVIYFDKGGKLSDNP
                     DDYKQGAVYSDLETFLQLVRNIPGVVGASNFRHSIVNRDGGTTDIQWQGKSSDDQTSF
                     TDIACGYDFIETLGIEMEQGRSYSRDYGADDNKVVFNEAAVKSMGLTDPVGKTVTIWG
                     AQKQIIGVTKDFHFQSLYENIKPCFFDLSMNQRVSKIIVRVKAGEEKATIDRLQKFYK
                     QYTGEALDYKFLDADYQELYSSEQRVAALSKYFAGLTIIISCLGLFGLAAFTAQKRQK
                     EIGIRKVVGATTSRIVLMLSKDFLKLILVALVVAFPVSWWAMSSWLQSFAYRIN"
BASE COUNT          626 a          492 c          449 g          644 t
ORIGIN      
        1 atgttgatgc gataggcaaa actttgtagc cagctgctca tcgcccacca tgaaaccggg
       61 aatgcaacca ccagcgccac aagtataagc ttcaaaaaat cttttgacaa catcaaaaca
      121 atgcgacttg tggttgctcc gacgactttg cgaatgccga tttctttttg tcgtttctgc
      181 gctgtgaacg ccgcaaggcc aaataaaccg agacaggaaa taatgatcgt taatccggcg
      241 aaatatttcg ataaagctgc aactcgttgc tcagatgaat acagctcctg gtaatcagcg
      301 tcaagaaatt tgtaatcgag cgcttcgccg gtatattgtt tataaaattt ttggagcctg
      361 tcaatggttg ctttctcctc acctgctttt acccgtacga ttattttaga aacgcgttga
      421 ttcatgctca gatcaaaaaa acaaggtttg atattttcat atagcgactg aaaatgaaaa
      481 tccttagtaa cgcctattat ttgtttttgc gcaccccaga tggtcacggt ctttccaaca
      541 ggatcggtaa gtcccatgct ttttacagca gcctcgttaa aaacaacttt attgtcatcg
      601 gcgccataat cgcgtgaata gcttctgccc tgttccattt ctatgccgag cgtttcgatg
      661 aaatcatatc cacaggcaat gtcggtgaat gatgtttgat cgtcagacga tttaccctgc
      721 cattgaatat ctgttgtacc tccatcacgg ttcacgatgc tatgcctgaa attcgacgca
      781 ccgacaacac caggtatgtt tcttacaagc tgcagaaaag tttccaggtc gctatagaca
      841 gcgccctgtt tataatcgtc agggttatct gataattttc cgcctttgtc aaaatagatc
      901 acatgttcgc ggttatagcc gaggtttgtg gtttgtatca gctgcatttg acggtagatc
      961 accattactg caacgataag aataatagag attgagaatt gaaataccag taatcctttc
     1021 cgcacccctc cttcaccgcc tccgcttttt agtttgtctt ttaatataga agccggtctg
     1081 aaggcagaca catataacgc agggtaacag ccggaaatta taccggttat aaaagttacc
     1141 gcaatcaatg cgagtggcat gccgccgtcg aaatggagcg tgagatgctt atctgttatc
     1201 tgtgcgaaaa cgggaagcaa cagctttaca attccgatcg ataacagcag cgataagaat
     1261 gccattaaga cggattcgga catatattga acaataagcg aacgacgcgt tgcgcctacg
     1321 atcttttgaa tgcctgcttc cttaatcctg tttaacgccc ttgcagtgga caaattcatg
     1381 aagttgatac aagcaataaa tagaatgaga atagctacaa ctgaaaacag cctgacatat
     1441 tctatgcggc cgccggaagg cacaccattt tcatagtggt tatagagata ggtgtcagaa
     1501 aaccgctggg cgaacaatac ttctttcgat tcatcacttt ttcttttcac gaactccgca
     1561 attttcttat tgaacgcact tgcatctgtt ccttttttca aaagaacata cgtgcttggg
     1621 tcattattcg tccattttaa cagcttggga ttcttttcga aaaattgagc ataattgaaa
     1681 atggcgtcgg cctgtattgt agaattggaa ggcaattttt caaacagccc gacgataagg
     1741 taatccccat taaaattttc ctggttccat tcgattgatt tgccaatgat gttggtggtg
     1801 gtgccaaata atttcaaagc cagttgccgc gatatggcga cattattttt cgatgcgtag
     1861 agctgattct cgtttccatc ggcaaaatca agcggaaata ttttgaaata gtcgccgctt
     1921 acaaattcag catcggccct gatatgctga tcatggaaag aaaataagcc tttgtttgaa
     1981 aaccatgtcg aaggaataac cgatgcagcg tcctccactt caggcatttc ttttttcaaa
     2041 gaagcggcta agacacccgg tgtgtttgga attgcagcat taccatcgga agtcacttgc
     2101 tccacctggt aaagccggtc atcattttgg ttgaacttat ttatattcac ctcatctgct
     2161 acccataata agatcaatat tacacaggct aacccggttg atagcccaat a
//
LOCUS       DASQJI010000628         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_389537,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000628 DASQJI010000000
VERSION     DASQJI010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389537"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1597)
                     /locus_tag="VEV83_17060"
     CDS             complement(<1..1597)
                     /locus_tag="VEV83_17060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46893.1"
                     /translation="MKKFFSGFFYSLPVQLVLIHFRRYQVLLLFWFILFATISGHFLK
                     PYGADSLMLAPEYLGKVSALSTAFVGFAVAGFIMSWNITTFILHTRHIKFLATTAQPF
                     LKYCINNAVIPIIFLLCYFFYAIHYQRHEELSSSLEILALIGGFLGGFILSIAIAFFY
                     FFGTDKNIYRKMSTDINSANEKYERAARIIKRTHKERGEMRVDWFLSATFGLRKPRNV
                     RHYSHEFLDSIFKRHHIAAIQAVFLAFLMLILIGLFSESRFFQIPAAASITLFFTILI
                     AVAGALSLFLGNWSIPIVLSLYLLVNWLFQENIIDPRNKAYGLNYNTPHRPSYNKDTL
                     AHLMNDSNVAKDKSEFTSILNNWKQRQGTEKPVMFIVDVSGGGNRSAAFTMNVLMKLD
                     SLTAGKFFQHTFLISGASGGMIGAAYFRELYLEKQLGKINTLQEKQYIDNISKDLLNP
                     VFSSLVTRDMIGPLRKFKLGENSYIRDRGYAFEQKLNSNTKGVLNKKISDYFLPEQQG
                     VIPAMFFSSAITRDGRKLLVSTHP"
BASE COUNT          512 a          363 c          374 g          462 t
ORIGIN      
        1 cagggtgtgt tgataccaac agctttcttc catcccgggt gattgctgaa ctgaaaaaca
       61 tcgcagggat aacaccctgt tgttcgggca aaaaataatc gctgatcttt ttgttcaata
      121 cgccttttgt attggaattt aatttttgtt cgaaagcgta gccgcggtcg cgtatatatg
      181 aattttcacc gagtttaaat ttgcgcaaag ggccaatcat atcgcgtgta accagcgaag
      241 aaaaaaccgg atttaaaagg tccttcgaga tattatcgat gtattgcttt tcttgcaagg
      301 tgttgatctt tccaagctgc ttttcgaggt acaactccct gaagtatgca gctcctatca
      361 tgccgccgga tgccccgctt atcaggaaag tatgctgaaa aaattttccg gcagttaatg
      421 aatcgagctt catcaacacg ttcattgtaa atgcagcgct cctgttaccg ccaccactca
      481 catcaacaat gaacattacc ggcttttccg ttccctgccg ttgtttccaa ttgttgagga
      541 tggaagtaaa ttccgattta tcttttgcca catttgaatc attcatcaaa tgagcaagcg
      601 tgtctttgtt gtaagacggg cgatgcggag tgttgtagtt taatccatat gctttgttgc
      661 gcggatcaat gatgttttcc tggaacaacc agttcaccag caggtagagg cttaaaacaa
      721 tcggtatgct ccaattgccc aaaaaaagcg acagcgctcc ggccacagct ataagtatgg
      781 taaagaaaag agtgatactg gctgctgcgg ggatctgaaa aaacctgctt tcagaaaaca
      841 gcccgataag aataagcatc aggaaagcaa ggaacacagc ctggatagca gcgatgtgat
      901 ggcgcttaaa aattgaatcc aggaattcgt gactgtagtg gcgaacatta cgtggtttac
      961 gcaatccaaa tgtggcgctc aaaaaccaat caacccgcat ttcgcctctt tctttatgag
     1021 tccttttaat tatacgcgct gcccgctcat atttttcatt cgcagagtta atgtcggtcg
     1081 acattttcct gtaaatattt ttgtcggtcc cgaaaaaata aaaaaaggcg atggcgatag
     1141 ataaaataaa tcctcctagg aaaccaccta tcagtgcgag tatttcgagg gaagatgata
     1201 attcctcatg gcgttgataa tgtatcgcgt aaaagaaata acacaacaga aatatgatcg
     1261 ggataacggc gttgttgatg caatacttta aaaagggctg cgccgttgtc gcaaggaact
     1321 taatatgtct cgtgtgcagg atgaacgtgg taatattcca gctcatgata aagcctgcga
     1381 ccgcaaatcc cacaaaagct gtactcagcg cgctgacctt gcctaaatat tccggcgcga
     1441 gcatcagtga gtcggcaccg taaggtttta aaaaatggcc gcttattgtt gcgaagagaa
     1501 tgaaccagaa aagaagaagc acctggtatc gcctgaaatg gataagcacc agttgcacag
     1561 gtaaagaata gaagaagccc gaaaaaaatt tcttcatagc atatgaaccg agcctgttta
     1621 ctgccaacag ccatgataaa tgtaagctgt ttcctttaag ccaaacctat aaatcaggct
     1681 gtcttcacgt aagatgctaa aagttttgat t
//
LOCUS       DASQJI010000629         6859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1308809,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000629 DASQJI010000000
VERSION     DASQJI010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6859
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308809"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1271)
                     /locus_tag="VEV83_17065"
     CDS             complement(75..1271)
                     /locus_tag="VEV83_17065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46894.1"
                     /translation="MVAALREKFNREFTPKKYHDYLEELNSAHPGDLEFRVAETPIFV
                     DRAFKEKILSACESIVDVITQPDFLSITSRAVPEDLNVPNETDRPEFIAFDFGICENE
                     KGELEPQLIEMQGFPTLFAYQVWDDEITRKHFKIPSNYSAYLNGFEKESYLQSLKEII
                     VGDYDPSNVILLEVLPHRQKTRIDFYCTHDYLQIPVVCITELIKEGKKLFYLKNGNKT
                     EVKRIYNRVIFDDLQKQEPAIQEKGKILFEELDVTWVPHPNWFYRISKYTIPFIRHPY
                     IPETRFLSDVKTIPDDLENYVLKPLFSFAGQGVVIDVKREDVDAVKDPHNWILQRKVK
                     YASVIKTPDEGAKAEIRMFYFWKHGAPRPVATTNLARLSKGKMIGVRYNQDREWVGGS
                     LVFFEK"
     gene            complement(1459..1531)
                     /locus_tag="VEV83_17070"
     tRNA            complement(1459..1531)
                     /locus_tag="VEV83_17070"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1496..1498),aa:Thr,seq:cgt)
     gene            1676..2497
                     /gene="kdsA"
                     /locus_tag="VEV83_17075"
     CDS             1676..2497
                     /gene="kdsA"
                     /locus_tag="VEV83_17075"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HYK46895.1"
                     /translation="MLPAYLKELFANQQYDENNFFLIAGPCVVESEELLIEVASKVAP
                     ICARLGIPYIFKSSYRKANRTSSNSFTGIGDEAALKLLKKIRETFSLPVVSDVHAHDE
                     TAMAAKYLDVLQIPAFLCRQTDLLIAAADTGRIVNVKKGQFVSGPSMKFAAEKIRNAG
                     NEKIILTERGNSFGYQDLVVDYRNIPWMQEHAVPVVMDCTHSLQQPNQTSGVTGGNPQ
                     LIGTIAKAAIAAGADGLFIETHPSPSIAKSDGANMLQLGLLEPLLEQLVKLRKAL"
     gene            complement(2492..3529)
                     /locus_tag="VEV83_17080"
     CDS             complement(2492..3529)
                     /locus_tag="VEV83_17080"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK46896.1"
                     /translation="MYIEHSAYNAAQILQLFAHCFGGRTTDDHFEVPPLYGEGQLHAF
                     NFSGGMSALISELRLNERLLIKRNRHSTAQDFVLQFNEIAETPATTDPGIASAQSSDH
                     RRSVVRLSSSLKAAETEFLAGYRVRAITIIFNKQALLNLLDFDAIEKFIGTFFSLYLK
                     KNFVAAIDAESRLVMQDLFRDIYTHPLQNLFVENRILLLLEKFMHNFIVKEQHTAKKL
                     QFKEEEISRLVKAENTLLEDFGKLPPTISQLSKLCAMSSTKFKNDFKILYGLPVYEYY
                     QKNRMAYARGLIQGGDYSIKEVGMMIGYSNLGHFAAAFKREYNMLPSEWLHANKLHPL
                     VNESAYPFTGS"
     gene            complement(3614..4561)
                     /locus_tag="VEV83_17085"
     CDS             complement(3614..4561)
                     /locus_tag="VEV83_17085"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYK46897.1"
                     /translation="MIKIEYSYTNFNELLRHVASSLHLKLKNNSALLSPSIGEGSVEA
                     MVLKNGLQLMLFDYTLKEEVLYHRKKANRDFYLIRIDDAADQKDVVKSSLLFSHVMNE
                     WFYLAPANTRVRHLHILFSKDWLRDLLVNEPKGEMIMANLLLNVPLYHYELFDSEYRR
                     LLNDILLMKKDPMLNEFTIHNRVMLIVERLLTRYYRKITETGRSIRASPDELQRLKHV
                     ESEILKDFSFTPPNINQLSRMAAMSPSKLKQMFKEVFGMPVYQYYQKHRLQRGKAMLI
                     TKKYSLKEVATELGYTHVKDFSKAFCKHFDQLPEELIRQ"
     gene            complement(4569..4790)
                     /locus_tag="VEV83_17090"
     CDS             complement(4569..4790)
                     /locus_tag="VEV83_17090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC family transcriptional regulator"
                     /protein_id="HYK46898.1"
                     /translation="MYRLKQLIEWRAFGVCTALGEKLGISTSRIRMWFIYITFLTLGS
                     PLIIYMVMAFWLNMKRYMLSARRNPLKYL"
     gene            5007..>6859
                     /locus_tag="VEV83_17095"
     CDS             5007..>6859
                     /locus_tag="VEV83_17095"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HYK46899.1"
                     /translation="MAFDIETIKNVYEHMPARIAAARKTLGRPLTLAEKILYSHLSEG
                     QSLEVFERAKTYVNFAPDRVAMQDATAQMALLQFMQAGRPKVAVPSTVHCDHLIQAKV
                     GAKEDLATALQVNKEVYDFLASVSNKYGIGFWKPGAGIIHQVVLENYAFPGGMMIGTD
                     SHTPNAGGLGMIAIGVGGADACDVMAGLPWELKWPKLIGIKLTGKMSGWTSAKDIILW
                     VAGQLTVKGGTGAIVEYFGDGADSLSATGKATICNMGAEIGATCSLFAYDNKMAAYLE
                     ATAREDVANLANGIMEHLRPDIEVYESPEKYYDQVLELDLSQLEPYVNGPFTPDLATP
                     ISKMKDAVEKNGWPDKLEVALIGSCTNSSYEDISRSASIVKDAVSKGLKTNSEFTITP
                     GSEQVRFTIERDGFINDFESVGGVVLANACGPCIGQWARHIDDPNRKNTIITSFNRNF
                     AKRNDGLASTHAFVASPEVVTALAMAGTIAFNPLTDTLKNDKGEDVRLGEPHGYELPP
                     KGFAVDDPGFQPPAEDGSHIQVAVDPNSSRLQLLAPFAEWEGTDLKSLKLLIKAKGKC
                     TTDHISMAGPWLKYRGHLDNISNNLLIGAVNFFNNQTDSVKNQLTGEYGAVP"
BASE COUNT         1871 a         1572 c         1557 g         1859 t
ORIGIN      
        1 gcatgtctgt tctacacatc atagatcaga gatcagagat cagagatcat acattataca
       61 tcacagatcc tgttctattt ttcaaaaaac accaggctcc ctcccaccca ttcacggtcc
      121 tggttgtaac gaacgccgat catttttcct ttactaagac gcgcgaggtt agtcgttgcc
      181 accggccgcg gcgctccatg tttccagaaa taaaacatcc tgatctccgc ttttgcacct
      241 tcgtccggcg ttttaataac actcgcgtat tttacttttc gctgcagtat ccagttatgc
      301 ggatctttta ccgcgtccac atcttctctt tttacatcta tcaccacgcc ttgccccgca
      361 aacgagaata aaggcttcaa cacgtaattt tcaaggtcgt caggaattgt ttttacatca
      421 ctcagaaatc gcgtttcggg tatataagga tggcgtatga aaggtatcgt gtatttgctg
      481 atccgataaa accagtttgg atgcggcacc caggttacat ccaattcttc aaataatatc
      541 ttgcctttct cctggatagc aggctcctgt ttttgaagat cgtcgaagat cacgcggttg
      601 tagatgcgct tcacttcggt tttgttccca ttttttaaat agaataactt tttcccttct
      661 tttatcagct ctgttataca aaccaccggg atctgcaaat aatcgtgcgt gcaataaaag
      721 tcgatccttg ttttttgccg gtgcggtaaa acttcgagca ggatgacgtt agagggatca
      781 taatctccca caatgatctc cttcaacgat tgtaagtacg attctttttc gaagccgttc
      841 aaataagcgc tgtagttcga cggtatcttg aaatgttttc gtgtgatctc atcgtcccac
      901 acctggtaag caaataatgt aggaaagccc tgcatttcta taagctgtgg ctcgagttca
      961 cctttttcat tttcacatat tccaaaatca aaggcaatga attcaggccg atcggtttca
     1021 tttggcacat tcagatcttc aggcactgca cgcgacgtga tcgataagaa atcaggctgc
     1081 gtgataacat caactatgct ttcacaggca gaaagaattt tctctttgaa tgctctatcg
     1141 acgaatatgg gagtttctgc aaccctgaat tcgagatcgc ctggatgagc tgaattaagt
     1201 tcttcaagat agtcgtgata ttttttcgga gtgaactccc ggttgaactt ttcacgcaaa
     1261 gcagctacca tacgatcttg ttttcagatt ttttatcgcg atgccctcaa gccgggctaa
     1321 gcaaaattct ttgagccaac tatcggcttc cctgccagcc gacaggctgg gaacccccgc
     1381 ccgaacgacg tcagtcgggc agcgacgacc ctcccaatac gatcgggatt ctctaccact
     1441 cagctaaaca aggttatgag ccaactatcg gattcgaacc gacgaccctt tcattacgaa
     1501 tgaaatgctc taccagctga gctaagttgg cttatgccgc aaatgtaaat gggaaatagc
     1561 atttacgatg tacgatttaa atttacgatt ttaaacgcag cttcatcatc cacacttgag
     1621 attagtgcac cattcactat tcaccattga ccattgacat cgtacattcg cttttatgtt
     1681 accagcttat ttgaaagagc tcttcgcaaa ccagcaatat gatgaaaata atttcttcct
     1741 catcgcggga ccatgcgttg ttgaaagcga agagttgctg atcgaagttg cctcaaaggt
     1801 tgcacccatt tgcgcccgcc ttggcattcc ctacatattc aaatccagtt acaggaaagc
     1861 aaacaggacc agctcaaatt catttaccgg catcggcgac gaggctgcgt taaagctgct
     1921 taagaagata cgtgagacct tttcactgcc cgtggtttct gatgtacacg cgcacgacga
     1981 aactgcaatg gctgccaaat atcttgacgt acttcagata cctgcttttt tgtgccggca
     2041 aactgacctt ctgatcgcag cggcagacac tggcaggatt gtgaacgtaa aaaaagggca
     2101 gtttgtaagc gggccctcga tgaaattcgc cgccgaaaaa ataaggaatg caggaaatga
     2161 aaaaattatc ttaaccgagc gaggcaacag cttcggatac caggacctcg ttgttgatta
     2221 tcgtaacatt ccctggatgc aagagcatgc tgttcctgta gtgatggatt gcacacacag
     2281 tttgcaacaa cccaatcaaa caagcggggt aacaggtggc aatcctcaac tgatcggcac
     2341 aatcgccaaa gccgctattg ctgccggcgc agatggtttg ttcatcgaaa cacacccgag
     2401 cccttccatc gcaaaaagcg acggggcaaa catgttgcaa ctgggcctgt tggagccgct
     2461 gctggaacaa ttggtgaaat tgagaaaggc tttatgatcc ggtgaatgga taagcggatt
     2521 cgtttactaa cgggtgtagc ttgtttgcat gcaaccattc gctcggtaac atattatatt
     2581 ctcttttgaa cgccgcggca aaatgaccga ggttactgta accgatcatc atgccaactt
     2641 ctttgatcga gtaatcaccg ccctgtatta aaccacgcgc atatgccatc cggttttttt
     2701 gatagtactc gtataccgga agtccgtaga gtatcttgaa atcgtttttg aattttgtag
     2761 aactcatggc acacaacttc gacagttgac ttattgttgg aggcaacttc ccgaaatcct
     2821 caagcaacgt attttcagct ttcaccaacc ggcttatttc ctcctcttta aattgcagtt
     2881 tcttcgcagt gtgctgttct tttacgataa aattgtgcat gaatttttcg agtaacaaca
     2941 gtatcctgtt ctccacaaac agattttgca gcggatgcgt ataaatgtcc cgaaataaat
     3001 cctgcatcac caggcgggat tctgcatcga tcgcagccac aaaatttttt ttcaggtata
     3061 gggaaaaaaa agtcccgatg aatttttcaa tcgcgtcaaa atccagcaag tttaataaag
     3121 cctgtttgtt gaaaatgatc gtgatcgcgc ggacgcggta acccgccagg aattcagttt
     3181 cggcagcctt caaagaactc gataatcgta cgacgctcct gcgatggtca gaagactgcg
     3241 cggatgcaat gcccggatcg gtggtggctg gcgtttctgc gatctcgttg aactgaagca
     3301 caaaatcctg tgcagtcgaa tgcctgttcc gttttatgag aagccgttca ttcagtcgca
     3361 gctcagaaat cagcgctgac ataccgcccg aaaaattgaa tgcatgtaac tgtccttcac
     3421 catacaaagg cggtacctcg aagtgatcgt cagttgtgcg cccgccgaag caatgtgcaa
     3481 acaattgcag gatctgcgcg gcgttatagg cgctgtgttc tatgtacaaa ttgcgttggt
     3541 tggtttttca agcgttaatg ataggcctct ttccggttat tttttatgtc gacgttaata
     3601 cacggtgctc gcgttactgt ctgatcagct cttcaggcag ttgatcgaaa tgtttgcaaa
     3661 aggctttcga gaagtctttc acgtgtgtgt aaccaagctc agtcgccact tccttcaaag
     3721 aatatttttt tgtgataagc atcgccttgc cccgctgtaa cctgtgtttt tgatagtatt
     3781 gataaacagg cataccaaac acttctttga acatctgttt cagtttagac ggactcatcg
     3841 cagccatccg cgaaagctgg ttaatatttg gcggcgtaaa agaaaaatct ttgagtattt
     3901 cagattcaac atgtttcagt cgctgcagtt cgtcgggtga tgcgcgtatt gacctgcccg
     3961 tctccgtgat cttgcgatag tatcgcgtga gaaggcgctc aactatcagc atcacgcggt
     4021 tgtgtatcgt gaactcatta agcatcgggt cttttttcat aagcaaaata tcattcaaca
     4081 gcctgcgata ttcggaatcg aaaagttcgt aatggtataa aggcacattg agtaagaggt
     4141 ttgccatgat catttctccc tttggttcat tcaccagcag atcccgcagc caatcttttg
     4201 aaaacaggat atgcaggtgc ctcacccttg tgttagccgg agcaagataa aaccattcat
     4261 tcattacatg cgagaataaa agcgaggact taacaacatc cttttgatcc gctgcatcat
     4321 caatccgaat gagatagaaa tcgcggttag ctttcttgcg atgataaagc acctcttctt
     4381 ttaaagtgta gtcaaacaac atgagctgga ggccattttt caaaaccatt gcttcaacac
     4441 ttccttcacc aatggagggt gataataaag cggaattatt tttcagcttt aggtgcagcg
     4501 acgacgcaac atgcctcaac aactcgttga agtttgtgta ggaatattcg atcttaatca
     4561 aagcgtgttt ataggtattt aagcggattc cgcctggcag acagcatgta tcgtttcata
     4621 tttagccaga acgccattac catataaatg ataagtggcg agcccagcgt aagaaaagta
     4681 atgtagatga accacattct tatccggctg gtagagatac ccagcttttc tcccagtgct
     4741 gtacaaaccc caaaagcccg ccattctata agctgtttca atctgtacat gactgcaatt
     4801 taaaaaatta tcttttaaaa aacacaggcg gctaaagtgt tctttcatgt aaatttgccg
     4861 cgctgcgcaa ttgtttttca ttgccggaag gcacgccaat taaacagcgc ataaccgctt
     4921 gagattttta cctggttttc cgcggcattc gtcatctcga aaaaggtggt gcagtgtttt
     4981 taaagcttaa agttaaatca tagaatatgg catttgatat tgaaacgatc aaaaatgtat
     5041 atgagcacat gccggccagg atcgctgccg cgcgtaaaac gcttggacgt cctttaacgc
     5101 tggcggagaa gatcctgtat tcgcatcttt cggaaggaca aagcctggaa gtttttgagc
     5161 gtgcaaagac gtatgtaaat tttgcgccgg accgtgttgc gatgcaggat gcaacggcac
     5221 agatggcgtt gctgcaattc atgcaggcag ggcgaccaaa agtagctgtg ccatctaccg
     5281 tgcattgcga tcatttaatt caggcgaagg ttggagcgaa agaagacctt gctaccgctc
     5341 tccaggtgaa taaagaagtg tatgattttc ttgcgtcggt ttcgaataaa tatggaattg
     5401 ggttttggaa accgggtgcc ggtatcatcc accaggtagt gctcgagaac tatgcgttcc
     5461 ccggcgggat gatgatcgga accgatagcc atactccgaa tgccggcggt ttaggtatga
     5521 tcgcgatcgg agtagggggc gccgatgcct gcgatgtgat ggctggcctg ccctgggaat
     5581 tgaaatggcc aaaattgatc ggcataaaac ttaccggaaa gatgagcggc tggacgagcg
     5641 ctaaagacat tatactttgg gtggccggac agcttactgt gaaaggcgga acaggcgcta
     5701 ttgttgaata tttcggagac ggtgccgata gtttaagtgc aacaggtaaa gcaacgatct
     5761 gtaatatggg cgcagagatc ggtgcaacgt gctccttatt tgcgtatgat aacaagatgg
     5821 ctgcttatct tgaagccact gcccgtgaag atgttgcaaa cctcgcaaac ggaatcatgg
     5881 aacatctgcg gccggatatc gaggtgtatg aaagcccgga aaaatattat gaccaggttc
     5941 tcgagctgga tctcagccag cttgaaccgt acgtgaatgg cccctttacg ccagaccttg
     6001 caacgccaat ctcaaagatg aaagatgccg tagaaaaaaa tggatggccc gacaaacttg
     6061 aagtggcgtt gatagggagt tgcacgaatt cttcctatga agacatatcg cgatccgctt
     6121 ccatcgtaaa agacgcggtg agcaaaggcc tgaaaacaaa cagcgaattc acgataacgc
     6181 ctggttcaga gcaagtgcgt ttcacaatag aaagagacgg ttttataaac gattttgaaa
     6241 gtgttggcgg cgtagtgctg gcaaatgcat gcggaccgtg catcggccag tgggcaagac
     6301 atattgatga ccctaaccgc aagaatacca tcatcacttc gttcaacagg aattttgcaa
     6361 agcgcaatga cgggcttgcg tctacacatg cgtttgttgc atctcctgaa gtggtcacgg
     6421 cgctagcgat ggcgggaacg attgcattta atccactgac ggatactttg aaaaacgata
     6481 agggcgaaga tgtgagatta ggcgaaccac acgggtatga attgccgcca aaaggttttg
     6541 cagtggatga tcccggcttt caaccacccg ctgaagatgg aagtcatata caggtggcag
     6601 ttgatcccaa ctcatcccgc ttacaattac tggctccatt tgctgaatgg gaaggcactg
     6661 atctgaaaag cctgaagtta ctgatcaagg cgaagggcaa atgcaccacg gatcacatct
     6721 caatggcagg cccatggtta aaatatcgtg gccacctcga taatatttca aacaacttac
     6781 tcataggcgc ggtgaacttt ttcaataatc aaaccgacag tgtaaaaaat caacttaccg
     6841 gtgaatatgg agctgttcc
//
LOCUS       DASQJI010000630         2882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3000194,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000630 DASQJI010000000
VERSION     DASQJI010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3000194"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..691)
                     /locus_tag="VEV83_17100"
     CDS             complement(50..691)
                     /locus_tag="VEV83_17100"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK46900.1"
                     /translation="MKTKTMIMFTMMSLLMASSFAQKPKPSFAVSAGISSAYYYVDGD
                     VNSSSDFKTGLSAGVSARIPTGQHWGVEPGLFFVQKGGIENVEGMSAKTTLNYLEMPV
                     DMYYTKRNRFFFGFGPSFALALSGKAKLNDGSGDQTIDLKFGSNEEDDLKSFDAGVNL
                     LGGYRFANSMFVSVNVNSSVSNLSNEPGTQFNNAYLGIRLGYMFGNKATKEAN"
     gene            complement(840..1802)
                     /locus_tag="VEV83_17105"
     CDS             complement(840..1802)
                     /locus_tag="VEV83_17105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46901.1"
                     /translation="MKTIFRSFISIVLLLLISSRNLAQDTLAEFVCETAIETGISRDA
                     GTVQSVSNAADDRLNFYIISDQRTKFGVMLLRMKIKSRVRSFFSKNRMYTVVAKSADS
                     AAMRIEKIVKEQGNKKIANIWIDSHGHYCNGYSSFTIGNDEFNAKNIGDSFHTKALQR
                     IALYCDEHTQIAIGSCYGGATFTFPGSRNVPAQPMNGDSLMRGMGKIFNRSYIYGCES
                     WVMAKPGIFNNRYALAGYPLNKKFSDVGFKPVWERLGEWHRYQNESGTFENVNTLGLN
                     KYGEISLLQTGYQDLHGKKKTIERKVSNLKPGLFKKFSEDPEKH"
     gene            complement(1833..>2882)
                     /locus_tag="VEV83_17110"
     CDS             complement(1833..>2882)
                     /locus_tag="VEV83_17110"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK46902.1"
                     /translation="HPLNAQLTALINKYTAKGLPGIALLVTDKNGTWVGSAGKADIEH
                     NKLFTVNQVSKIASIHKLFLGTLMFKLFEDSVHTGIGYNALQQPIRTWLPPDITDHLA
                     NGDIITLGQLMKHESGIPDFIEMDNFYLDVLNMPQKQWAPEDIIKYVYDKPAVFTPGD
                     TAIYSNTNIILEAMIIDRAIGVDHAILLHEKILEPLGLSNTFYFPYDDLPNSIAQGYF
                     DLYNNNTILNVSNLLPGGMYSNIFDLNTFLKALLVDKTLLCEKSLSIMQTFGKPDPPN
                     RYGYGIMQKFIERGINAGIGHSGRDLGYSANLFYFPNTGVLHAFVVNYGTDAESNLRQ
                     VFYDFQNELMDLTLH"
BASE COUNT          747 a          646 c          616 g          873 t
ORIGIN      
        1 gatggcagtt tcgttaaccc cgggattttc tcatagcgaa cggacatact tagtttgctt
       61 ctttcgtcgc tttgtttcca aacatgtagc cgagccttat cccgagataa gcattgttga
      121 attgtgttcc cggttcgttg gaaagattgc ttacactgct gttcacattc acactaacga
      181 acattgaatt tgcaaaccga taaccgccta acaggttcac accggcatcg aaacttttaa
      241 ggtcgtcttc ttcattgctt ccaaacttta aatcaatggt ttggtcacct gacccgtcat
      301 taagttttgc ctttccagac agggcaagtg cgaaacttgg accaaagcca aaaaagaaac
      361 gattcctttt agtgtaatac atgtcgacag gcatttcgag ataattcaaa gtagtctttg
      421 cgctcattcc ttctacattc tcgatgccgc ccttctggac aaaaaataat ccgggctcaa
      481 caccccagtg ttgcccggtt ggtattcttg ccgacacacc ggctgacaaa ccagttttga
      541 aatcggacga ggaatttacg tcaccgtcca cataatagta cgctgaggaa attcctgcag
      601 aaacggcgaa tgatggtttc ggcttctgcg cgaatgatga tgccatcaga aggctcatca
      661 ttgtaaacat gatcattgtt tttgttttca tgatactttt ttttaaaatg aataaataag
      721 aaagggtccg ggttgacgcc gacctgcaga tcgtatatgt tgaaagcctt gcaatggctg
      781 tgaacaaaag caattcgatc cgaacaagag atcaccgctt cgattattgg agaagccgat
      841 cagtgttttt ctggatcctc cgaaaatttt ttaaacagtc ctggtttaag attgcttact
      901 ttcctttcaa tcgttttttt cttgccgtga aggtcctggt agcctgtttg gagcaaagag
      961 atctcgccat acttattcag gccaagtgta ttcacgttct caaacgtgcc gctttcgttt
     1021 tgataacgat gccattctcc aagtcgttcc cacaccggtt tgaaacctac gtcgctgaat
     1081 tttttattta gcgggtaacc ggcaagtgca tagcgattat tgaaaattcc aggtttggcc
     1141 attacccaac tttcgcagcc atagatgtac gagcggttga atattttacc catgcctctc
     1201 attaaagaat cgccattcat tggctgagca ggcacgtttc gcgaaccagg aaaagtgaaa
     1261 gtggcgccgc cataacagga cccgatcgcg atctgcgtat gctcatcgca gtagagtgcg
     1321 atccgttgaa gtgccttcgt atgaaatgag tcgccgatgt tttttgcatt gaactcatcg
     1381 ttaccgatcg taaaagatga ataaccatta caataatgtc cgtgcgaatc gatccatatg
     1441 tttgcaattt ttttattacc ctgttctttt acgatttttt cgatccgcat cgcggcggag
     1501 tctgcgcttt tagccacaac tgtgtacatc ctgttcttac taaaaaaact gcgcacgcgt
     1561 gacttgatct tcatcctgag cagcatcaca ccgaatttgg tcctttgatc agaaatgata
     1621 taaaagttaa gtcggtcgtc agcggcattc gaaacacttt gaactgttcc tgcgtctcta
     1681 ctgattcctg tttcaatcgc ggtttcgcac acgaattcgg cgagtgtgtc ctgcgcaagg
     1741 tttcttgacg atataagcaa cagcagaaca atgcttataa atgatctgaa aatagttttc
     1801 ataaattttt gttttgtcgt acggtgcttt tcttagtgga gcgtcaggtc cattaattca
     1861 ttttggaaat cgtagaacac ctgcctgagg ttactttccg catcggttcc atagttcaca
     1921 acaaatgcat gcagcactcc ggtgtttgga aaatagaaca ggttcgcact gtaccccagg
     1981 tctcttcctg aatgcccgat gcctgcatta ataccgcgct cgatgaattt ctgcatgatg
     2041 ccatacccat agcgattggg tggatcaggt ttcccgaacg tttgcatgat tgatagagat
     2101 ttttcgcata gcagcgtctt atccacaagc aacgctttaa gaaaagtgtt caggtcaaat
     2161 atgtttgaat acatgccgcc gggcagcagg ttcgatacat tcagtatcgt gttgttgttg
     2221 tacaggtcga aatatccttg tgcaatgctg ttaggcaaat catcataagg aaaataaaaa
     2281 gtgttgctga ggccgagtgg ctctaatatt ttttcatgca gcaaaatcgc atggtcaacg
     2341 ccaattgcac gatcaatgat catcgcttcc aggataatat ttgtattgga gtatatcgct
     2401 gtgtctcccg gagtaaatac cgccggttta tcgtaaacgt attttataat gtcttccggc
     2461 gcccattgtt tttgtggcat attcaggaca tccaggtaga aattatccat ctcaataaaa
     2521 tcggggattc ctgattcatg tttcatcagt tgtccaagcg tgatgatatc accgtttgcg
     2581 agatgatcgg ttatgtccgg cggcaaccag gtcctgatcg gttgctgaag cgcattataa
     2641 ccgatcccgg tatgaacgga atcttcaaat aatttgaaca tgagtgtccc aagaaataat
     2701 ttgtgaatgc tggcaatttt agaaacctgg tttaccgtga acagcttatt gtgctcaata
     2761 tctgctttgc ccgcgctacc cacccaggtt ccatttttat cggtcaccag caaggctata
     2821 cccggtaaac ctttcgcagt gtatttattt ataagcgcgg tcagttgtgc gttcaaagga
     2881 tg
//
LOCUS       DASQJI010000631         5306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1925985,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000631 DASQJI010000000
VERSION     DASQJI010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5306
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925985"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VEV83_17115"
     CDS             <1..669
                     /locus_tag="VEV83_17115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46903.1"
                     /translation="QTKTILTSNRLFAKNDKVAEFEKALANHAQKFHTGDVKWRVWSI
                     QSGPDAGGYMVTEGPSDWTSLDSRGDISAEHTADWEKNVLPLTTGQGQSAYYEFEADL
                     GTVQLTDYSDKILINHMTAKPGKIVNAEDLIKRQKKVWEAGKESVAVYSAAFSGEPGF
                     ITVTRLKEGLKELASDYRKPFAERYNDAYGAAAFDTWLKDYSDAVQSRWSELLIYKPE
                     LSSK"
     gene            1405..>5306
                     /locus_tag="VEV83_17120"
     CDS             1405..>5306
                     /locus_tag="VEV83_17120"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor D domain-containing protein"
                     /protein_id="HYK46904.1"
                     /translation="MKQFLRIAFAQLFVCLTIGTFAQVSISSQWAWMSGDKTANHAGV
                     YGTKGVAAATNQPGTRAFSNSWTDASGNLWLFGGIGNAESDFGVGPLNDLWKYDPVNN
                     QWTWVTGESVRDGTSVYGTKGVAAPTNTPGSRIGAVSWTDASGNLWLFGGVEGIFELN
                     DLWKFNTASNQWTWVSGDNSGNNLGVYGTRGVAAPTNKPGGRQDAISWIDASGKLWLF
                     GGNYFDALDHPQYLNDLWKYDPATDLWTWVSGDNTPNSTGSFGTKGVASASNKPGSRI
                     YAASWEDASGGDLWLFGGIVYALGTSNDLWKYNIASDLWTWVSGDNASNVPGVYGTIG
                     VAAATNKPGSRRNAVTWDDASGNLWLCSGLGYASTNGALNDVWKYNPTINQWTWVGGD
                     NTINSLGVYGTKGVATCSNKPAGREGAVSWTDGQGDIWIFGGTSANPSDHFNSLWELG
                     TGAPTASTNPASAISLSGGTLNGTAGDHGPLTTTTFEYGTSPTLAGATSVAATLGATL
                     PCHTATATLRGLAPNTIYYFRIKASNSAGTTLGNILSFTTTPGAALNFDGTNDYVEIP
                     TSSSLEEYVNSGELSIEYWIKPGAPNGQYRDVISRAPTDVAHSNADYLVEGEPNSLNY
                     LHYVRIFNFVTQNVEYVSVPVMYTVNEWQHIAITAKMGGSLKVYRNGVLQGTASLVNC
                     AFLTSSCPTRLMYDARVLGFFQNGSLDEVRLWSRELNATEIANNINCEITAGGTNLNA
                     NYHFNQGGAGSNNAVEITLLDASGNANNASLKNFALDGLTSNWVAPGGIGYEINVQGN
                     SVDLVDGDVTPSPTDSTDYGNVTTGSSLAHHFAIQNSGSGSLTVTSITVTGTNAAEFV
                     VTGAPTTVGAGSSAPFAVTFTPASTGLRTAVIHINNNDCNEGDYDFAVQGYVDPCLAF
                     NNNRAYVNVNATGANNGTSWTNAFTKLQDALAAANTCAGLTQIWVAQGTYYPDEGGGK
                     ADNDRNATFTLKNGIAIYGGFEGTETALSQRNLKINVTNLSGDIDKDNTITNNAYHVT
                     TASSTNSTAIIDAFTITGGNASDNGGGMLNNSGSPIISNCTFSGNRAANGGGLYNNTA
                     SPTITNCIFSGNAASNLGGAMSNGSSSLSLINCTISGNVAGGGGGGGIYSSLGSGTIT
                     NCIFWNNKDVNGIGTSGSSMFNFASSLNISYSLVQGQNGGTGNLDGTNAANNPLFVTD
                     VDPNTAPTTGGNFHLQLGSPAINAGTNSGAPSTDIEGNFRGLTLADPADMGAYELSTI
                     PHASIADKSINEGNSGTTLMKFKVTLDHAYGGTVKIKYA"
BASE COUNT         1528 a         1190 c         1248 g         1340 t
ORIGIN      
        1 caaacaaaaa caattcttac ttccaaccgc ttatttgcca aaaatgataa agttgccgaa
       61 tttgaaaaag cgcttgcgaa ccatgcgcag aaatttcaca ccggcgacgt gaagtggagg
      121 gtatggagta ttcaatccgg accggatgct ggcggatata tggttactga aggtcctagt
      181 gattggacgt ctttggatag ccgtggcgac ataagtgcag aacacacggc agattgggaa
      241 aaaaatgttt taccacttac cacaggccag ggtcaaagcg cttattatga attcgaggct
      301 gatttaggta ccgtacagct tactgattac tcagataaga tccttattaa tcatatgaca
      361 gcaaagcctg gtaagatcgt taacgctgaa gacctcatca agagacaaaa aaaggtatgg
      421 gaagcgggca aagaatccgt tgcagtttat tctgcagcat tttccggaga accgggcttt
      481 attacagtaa cccgtttaaa agagggcctg aaagaattag ccagcgatta ccgtaagcca
      541 tttgcagaaa ggtacaatga tgcttatggt gccgccgcat ttgacacctg gttgaaagat
      601 tattctgatg ccgtgcagag ccggtggtct gaactgctca tttacaagcc ggaattgagt
      661 tcaaaataat tgccggcgaa gtttgcagcc ttaaacggat taaaaattat ttttcgcaca
      721 gagccaacgg agcacatgga gaaaattctc tgagatctct ggggtctctg tgcgaaaatt
      781 ttaaatttaa aagcgagtct cctccaaatt ttttgcacgg acccaaaaac atatgaatcc
      841 aattgtccat tagctcttcg ctctcgaacc tgaaacttca aacctcaaac caattgtttt
      901 aaaatttttc gcacagagcc aacggagcac atagagaaat tctgtgtgat ctctgcgctc
      961 tctgtgcgaa aactttaaaa tctaatattc cgaaattttt gtacggaccc aaacagaata
     1021 tgtagagaaa tttgattttc acacggcatt ctaaatgaac cgcgaacttc aaacctcaaa
     1081 tttcaaacat cttcaactcc ggtaaatatt ccacttgttc ggacactctt tcccaccgtt
     1141 cgtccttacc tgcttaaact ccacaaacta tatagataag tttacgaaac aaccttcgaa
     1201 aactttctgt atgaacagtc tttcatcacc tcggacgtac agttttaagc ccccatcccc
     1261 taaaggcgag tacaccgggc cgcaggcaag cctatggtgt agcttcggca ggcatcattt
     1321 tttccgcatc ggttttatca ttagattcac cgcttacttg catataccaa tctctgcaat
     1381 tcaccactat ttaaacgtac cactatgaaa cagtttttac gcattgcgtt tgcacagctt
     1441 tttgtttgcc ttacgatagg cactttcgcc caggtttcta tcagttcaca atgggcatgg
     1501 atgagcggag ataagaccgc gaatcatgcc ggtgtatatg gcacaaaggg agtggctgct
     1561 gctaccaatc aacctggaac aagagctttc tctaattcgt ggacagatgc ctcaggcaac
     1621 ctttggcttt ttggtggcat tggcaatgct gaaagcgact tcggtgtagg cccgctaaat
     1681 gatttatgga agtatgatcc tgtgaacaat caatggacct gggtaaccgg ggaaagtgta
     1741 cgcgatggca cctcggtgta cggtaccaag ggagttgctg ctccaactaa tacacccggg
     1801 tccaggattg gagccgtatc atggactgat gcttcaggga acctatggct ttttggtgga
     1861 gtagagggca tttttgaatt aaatgatctt tggaagttta acactgcatc gaatcaatgg
     1921 acatgggtaa gtggggacaa ctcaggaaat aatttaggtg tatatggcac aaggggcgtg
     1981 gctgctccga caaataaacc gggaggcagg caggatgcta tatcgtggat agatgcctca
     2041 ggcaagcttt ggctgtttgg aggaaactat tttgatgcac tcgaccaccc tcaatattta
     2101 aatgatcttt ggaagtatga ccccgcaact gatctatgga cctgggtaag cggggataat
     2161 accccaaata gcacgggttc atttggtacc aaaggagtgg cttccgcctc caataaaccc
     2221 ggctccagga tttatgctgc atcatgggaa gacgcatcag gtggtgattt atggcttttt
     2281 ggtggaattg tttatgcctt ggggacctct aatgatcttt ggaaatataa tatagcttca
     2341 gatctgtgga catgggtaag cggcgataat gcctcaaatg ttcccggtgt atatggtaca
     2401 attggcgtgg ctgctgccac gaataaaccg gggtcgagac gtaacgctgt aacgtgggat
     2461 gatgcctcag gcaatctatg gctttgtagt ggattgggtt atgcctccac caacggtgct
     2521 ttaaacgacg tttggaaata taaccctaca ataaatcaat ggacatgggt gggcggagat
     2581 aacacgataa atagccttgg ggtatatggc acaaagggag tagctacctg ttcgaataag
     2641 ccggccggaa gagaaggcgc tgtatcatgg accgatggcc agggcgatat atggattttt
     2701 ggaggaactt cggcaaatcc ctctgatcat ttcaatagtc tttgggaatt gggaaccggg
     2761 gcgccaacag ccagcactaa tcctgcaagt gctatatctt tatcgggcgg gacattaaat
     2821 ggcacagcag gtgatcacgg ccctttaacc acaactactt tcgaatatgg cacctcacca
     2881 acgcttgctg gagctaccag tgttgcggca acgctcggcg caacacttcc gtgccacaca
     2941 gcaacagcaa cactaagagg gctggcaccc aatacaattt attattttcg gattaaggcc
     3001 agtaattctg cgggtactac acttggaaat attttgagct ttacaactac acccggtgct
     3061 gcattaaatt ttgacggaac caatgattat gttgagatac caacttcatc ttcactagaa
     3121 gagtatgtga acagcgggga gttgtcaata gaatactgga taaaaccagg tgcgcctaat
     3181 ggacagtatc gcgatgttat ttcgagagca cccacggacg tagcccattc aaatgctgac
     3241 tatttagtgg aaggcgagcc caattcgctc aattatctcc actacgtgag aatattcaat
     3301 ttcgtaacgc agaatgtcga gtatgtatcg gttcccgtaa tgtacactgt gaatgaatgg
     3361 caacatattg ccatcacagc caaaatggga ggttccctga aagtttacag gaatggagtg
     3421 ctgcagggaa cagcaagttt agtgaactgc gcttttctta ccagtagttg ccctacaaga
     3481 ttgatgtatg atgcgagggt tcttggtttc tttcagaatg gaagcctgga tgaagtgcga
     3541 ctctggagcc gtgagttgaa tgcaaccgaa atagctaata atatcaattg cgagattact
     3601 gccggcggca ccaatctgaa tgcaaattac cacttcaacc agggaggagc cggatcaaat
     3661 aatgccgtcg aaataacact tttagatgca agcggcaatg caaataatgc gtcactcaaa
     3721 aattttgcat tggatggctt aacatcaaac tgggttgcgc cgggtgggat cggttacgaa
     3781 ataaatgtcc agggcaacag tgttgatcta gtggacggag atgtaacacc atctccaact
     3841 gatagcaccg attatgggaa cgttaccacc ggaagtagcc tcgctcacca cttcgccatt
     3901 caaaatagcg gatcaggatc tcttacggta accagcatta cagttacagg aacgaatgcc
     3961 gctgagtttg tggtgacagg cgcaccaacc accgtcggtg ctggcagctc ggctccattc
     4021 gctgtaactt ttacaccggc ctcaacaggt ctgcgcactg cagtgattca tataaataac
     4081 aatgattgca atgaaggcga ctatgatttt gcggtgcagg gatatgtgga cccctgcctt
     4141 gcatttaata ataaccgggc ttatgtaaat gtcaatgcca ccggagcgaa caacggcaca
     4201 tcgtggacca atgcctttac gaaactgcag gacgcattgg cggcagccaa cacctgtgcc
     4261 ggccttacgc aaatctgggt ggcccagggc acttactatc ctgatgaagg tggcgggaaa
     4321 gccgataacg accgcaatgc cacattcact ttgaaaaacg gaattgctat ctatggtggt
     4381 tttgaaggaa cagaaacagc cctaagtcag cgcaatctca aaataaatgt taccaatctc
     4441 agcggcgata ttgacaagga taatacgatc acaaataatg cttaccatgt aaccacagct
     4501 tcgtcaacaa acagcaccgc gataatcgat gcttttacaa ttacaggagg aaatgcttcc
     4561 gacaatggtg gtggtatgct gaataattca gggtcaccca tcataagtaa ttgcaccttc
     4621 tcaggcaatc gtgcagcaaa cggcggcgga ttgtataaca acaccgcgtc gcccacaata
     4681 accaattgca ttttctcggg caatgctgct agtaatcttg ggggagcaat gtccaacggc
     4741 agttcttcgc tgtctctgat caattgcacc atctccggca acgtagcagg aggcggtggc
     4801 ggtggaggaa tatatagctc cctcggctct ggaactataa caaactgcat tttctggaac
     4861 aacaaggatg tcaatggaat tggcacatca ggctcatcca tgtttaattt tgcatcaagt
     4921 cttaatattt cttacagcct tgtgcaagga caaaacggcg gcacaggcaa tctggacgga
     4981 acgaacgcag ccaacaaccc gctttttgta acagatgttg acccaaatac agcaccaact
     5041 acgggcggca attttcactt gcaacttggt tcaccggcca ttaacgcagg aaccaacagc
     5101 ggcgcgcctt ctaccgatat cgaaggaaat tttcgcgggc taacgttagc agatcccgct
     5161 gacatgggcg cttatgaact ctcaacaatc cctcatgcaa gcatagcaga taaatcaatt
     5221 aacgaaggca atagcggaac aactcttatg aaatttaaag taacacttga tcatgcttat
     5281 ggaggtactg taaagatcaa atatgc
//
LOCUS       DASQJI010000632         2475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1772840,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000632 DASQJI010000000
VERSION     DASQJI010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1772840"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VEV83_17125"
     CDS             <1..265
                     /locus_tag="VEV83_17125"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK46905.1"
                     /translation="LSTVNFAFIDGNHRKEPTTHYFNMLMTKTNPSSILVFDDIHWSN
                     EMEAAWEAIKCHPSITLTIDLFFIGIVFLRTEQKVAEHFTIRF"
     gene            337..1476
                     /locus_tag="VEV83_17130"
     CDS             337..1476
                     /locus_tag="VEV83_17130"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HYK46906.1"
                     /translation="MTIGILKEPVPETRVSLLPEGAASLTKQNISVQVEKTAGDSAFA
                     FDDAYVTQKCAMQERSAVLQSDIILTMHSLPDTDQAQLKPNAILIGMYQPLFNYELMK
                     QWAEKNITTFSLDMMPRTTRAQAMDVLSSQANIAGYKAVLYAANIYPRYLPMFMTAAG
                     SITPAKILILGAGVAGLQAVATARRLGAIVQVFDTRPAVKEEVMSLGAKFIEVEGAAD
                     ASKAGGYAVEQTEEYKQKQQQKINEAISKADIVITTAQIPGKKAPILISNEMLSAMKP
                     GSVIMDLAAATGGNTLQTKNNEVTSYNNVTIVGNSDLAATMPGDASKLYGKNVLNFLQ
                     LLLTKEGTINLNFDDDLVRGCCITHDGKVVNERVRQLIASDTWLL"
     gene            1605..1934
                     /locus_tag="VEV83_17135"
     CDS             1605..1934
                     /locus_tag="VEV83_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HYK46907.1"
                     /translation="MLHWITENQEYIYIVILMIFLGIEVIGRVPSVLHTPLMSGANAI
                     HGVVIIGAIIVMGKAESDNYLALILGFLAVILGTLNVVGGFVVTNRMLEMFSSKSGKS
                     HKEVPDE"
BASE COUNT          811 a          510 c          521 g          633 t
ORIGIN      
        1 actctcaacc gtcaacttcg ccttcataga cggcaatcat cgcaaagaac cgacgacgca
       61 ctatttcaac atgctcatga caaaaacgaa tccttcgagc attcttgtgt ttgacgacat
      121 tcattggagc aacgagatgg aagctgcctg ggaagcgatc aagtgccatc cttcaataac
      181 acttaccata gatctttttt ttattggtat agtatttttg cgaaccgaac aaaaagtagc
      241 agagcatttt actatccgtt tctgaataac tctttttatt caaattttgc gagttgctga
      301 aaagcggata attttcgcac agaacaataa aagcgcatga cgattggcat tttgaaggaa
      361 cctgtccccg aaacaagagt ttcactgctt cctgaaggcg ctgcttcgct taccaaacaa
      421 aacatttcgg tccaggttga gaaaactgcc ggcgattcag cctttgcatt cgacgatgca
      481 tacgtaacac aaaaatgcgc catgcaagaa cgttccgccg tgttgcagtc ggatattatt
      541 ttaactatgc attctttgcc agacacagat caagcgcagc ttaagcctaa tgcaattttg
      601 atcggcatgt atcagccact gttcaactat gaattgatga aacagtgggc tgaaaagaat
      661 attaccacct tcagtctcga tatgatgccg cgcacaacac gtgcgcaagc gatggacgtg
      721 ctgagcagcc aggcaaacat tgcagggtat aaagctgtgc tgtatgctgc aaacatttat
      781 ccaaggtacc tgcccatgtt catgaccgca gccggaagca taacacccgc gaagatcctg
      841 atcctcggcg caggtgtggc agggctgcaa gctgtcgcaa cggcgcggag attgggcgcg
      901 atcgtgcagg tgtttgacac gcgtcctgcg gttaaggaag aagttatgag ccttggtgca
      961 aaatttatcg aagttgaagg cgcagcagac gcatcaaagg ctggcggata tgcagttgag
     1021 caaacggaag aatacaagca aaagcagcag caaaagatca atgaagcgat ctcgaaggcc
     1081 gacattgtaa ttacgacggc ccagataccg ggcaagaagg caccgatatt gatcagcaac
     1141 gaaatgctga gcgccatgaa gccgggctct gttatcatgg accttgccgc agccacaggc
     1201 ggcaatacgt tacaaacaaa aaacaacgag gtgacaagtt ataataatgt caccatcgtt
     1261 ggcaacagcg atcttgcagc aacgatgccg ggtgatgcca gcaaattata tggaaagaat
     1321 gttctgaatt tcttgcaact tcttctcaca aaagaaggca caataaattt gaatttcgat
     1381 gatgatcttg tgcgcggctg ttgcattacg cacgacggta aggtggtgaa tgaacgagtg
     1441 cggcagttga tcgcatcaga cacatggcta ttgtgataac caaaaaattt ggcatgaggc
     1501 aaaccttcgt gcgctttgtg aaaacttcgt gttcgttgtg ctccgaacaa ttaaatcaca
     1561 caatgtgaac acaacaaata ggaaagccta aaaatttaga ctcgatgcta cactggataa
     1621 ccgaaaatca agaatacatc tatatcgtca tactgatgat atttctcggc attgaagtta
     1681 ttggacgagt accgagtgtt ttacatacgc cgttgatgag cggagcaaat gctattcacg
     1741 gcgtggttat tatcggcgcc atcatcgtaa tgggcaaagc agaaagtgac aattatttag
     1801 cactgatatt gggcttcctt gcagttatcc tcggtacatt aaatgttgtt ggaggtttcg
     1861 tagtcacaaa cagaatgctg gaaatgttca gtagcaagag tggaaaatct cataaagaag
     1921 ttccggatga gtgaaaagaa caataaagaa ccaaataaca aggtccaaat aaatatcaaa
     1981 taagaaattc agaatatcaa acaacaagtt ccaaatatca aataacaaat tccaaataac
     2041 aaaagtcaag ttccaaatat caaataacaa ggtccaaata aatatcaaat agcaaattca
     2101 gaatatcaaa caacaagttc caaatatgaa aacacaaatc gcaaataaat atcaaatgaa
     2161 gaaatgaaaa aataaatctc aaataagaaa tgcgaaatta aaatcaaaac caaccacgta
     2221 aaccacacag tgaaattttc aaaatctaat cgacgccagg ttcaactgaa atttattctt
     2281 gattctggtt gagattgatt agcatgttga gagttgtttt tgatttttta ttttccattt
     2341 ttttttgaag cttgactttt gttatttgga attttttcaa acccatggca ttaaacattc
     2401 tcacagtaat ttatattctt gcatcagtcg gctttattgt cgggctgaag atgctttcac
     2461 atccggcttc tgctc
//
LOCUS       DASQJI010000633         4515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_238217,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000633 DASQJI010000000
VERSION     DASQJI010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4515
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238217"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VEV83_17140"
     CDS             complement(<1..1025)
                     /locus_tag="VEV83_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter TolR"
                     /protein_id="HYK46908.1"
                     /translation="MKKVILIFSLCIVMRSINAQDGIGIFEKQVDIGNTKAGTATYST
                     QNQEYTVEGSGNNIWFNHDGFHYVYRQMKGDFILRCNASLVGNGGEAHRKLGWMIRAS
                     LDSTAACASLAIHGDGLTSLQYRRHNNDSMQEVKSSITKPAVLQLERRGTTFIMSVAR
                     DGETLTSDSIRLDLGDSVYVGLFVCSHDANVTETGKFYNVRIVIPAPPTLVPYKDYVG
                     SQLEILDVETGESRIIYQSPRSLQAPNWMKDGKRLLFNSDGLIYTFDLDNGASAVLNT
                     GSVKRNNNDHVISFDGKMLGLSSGTASSDASIVYTVPITGGEPKQITPTGPSYLHGWS
                     PDGKYLA"
     gene            complement(1127..1534)
                     /locus_tag="VEV83_17145"
     CDS             complement(1127..1534)
                     /locus_tag="VEV83_17145"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK46909.1"
                     /translation="MKKSLQILLIEDDPDDVELFREALNDNHVLHDMDVVMQGDEVIP
                     HLQQTSTLPEVILLDLNLPKIHGKEILKTLKSGDAFKDIPVVILTTSSAKTDIEFCLN
                     AGAEKFITKPTNIEGFDELVTAVVDIVSSNHPE"
     gene            1696..2466
                     /locus_tag="VEV83_17150"
     CDS             1696..2466
                     /locus_tag="VEV83_17150"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HYK46910.1"
                     /translation="MKTKISLGLIALLFVFMNSCTKDSNSTNQQGTTDMAVSLTDAPG
                     NYDEVNIDLQGVEVITESEGTRTLDAKTGIYDLLKYANGDDTVIATGRMKTGMISQIR
                     LILGDNNTVVVDGVSHHLITPSAEQSGLKLQLHDELVAGVKYALTLDFDANQSIVQQG
                     NGDYLLKPVIRIIDEAISGSIHGLVTPDTLHATITAEGNGHSYSTITNGSGAFLLKGI
                     PEGTYKVTITPNSADQPKVIDNVQVTTGESTDLHTIAF"
     gene            2590..2904
                     /locus_tag="VEV83_17155"
     CDS             2590..2904
                     /locus_tag="VEV83_17155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46911.1"
                     /translation="MEEEKQTPGNTAKPKSQTAGTRTIFDVFKFKGVLYKNLDDRYAR
                     KRIESWVSRLSAHSALVKALIDSDGFIDISPANSNAEYTHEGIPAQLFSEVLKITFPE
                     FL"
     gene            complement(2942..4084)
                     /locus_tag="VEV83_17160"
     CDS             complement(2942..4084)
                     /locus_tag="VEV83_17160"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK46912.1"
                     /translation="MKLRVVVLGAGFGGLELTTILSEKIGDRLELTLIDQNDSFYFGF
                     SKLDVMFGFKPPEAIRLFYNSIQKPGVKFCQQTIIAIDPVAKRVTTDKGTHEADVLVI
                     ALGANYDMDGTPGLAEGGNEFYSLAGARKLRNILPNFSKGHVIVGVASAPFKCPPAPS
                     EAALLTHDHLVKRGVRDQCEISLVMPFGLPIPPSPDTSKALLYAFQQRGIKFIPKRNV
                     SAIDASRHMAILDDGTEMPFDLFLGIPKHRVPAVVEESGLTVNGWIPVDPKNLKTSFP
                     NVYAVGDVTSVGTPKAGVFAEGAAKVAADSIVAEFENADAPPPFLGDGSCYIEFGQGK
                     VGRVDVNFFSGPTPTGTYREASEALVTEKKYFGSSRAERWFGTEFS"
     gene            complement(4307..>4515)
                     /locus_tag="VEV83_17165"
     CDS             complement(4307..>4515)
                     /locus_tag="VEV83_17165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46913.1"
                     /translation="GLYTSIDSMPTWAQWITKFNPVSYFIDVMRMVVLKGSNLFDIKR
                     QLFIVMGFAVVLNGWAVFSYRKRS"
BASE COUNT         1287 a         1052 c          994 g         1182 t
ORIGIN      
        1 aaagcgagat atttcccatc aggactccag ccgtgcagat atgaagggcc ggttggcgta
       61 atttgtttcg gctcgccgcc agtgatggga accgtgtaca cgatagacgc atcactgctc
      121 gcagtgccgc tgctaagacc aagcattttc ccgtcgaaag aaattacgtg gtcgttgttg
      181 ttgcgtttaa cggatcccgt gttcagaacg gcggacgcac cgttatcaag atcgaacgta
      241 tatatcaagc cgtcgctgtt gaataacagc cgtttcccat ctttcatcca gttgggcgcc
      301 tgtaaagacc gcggcgattg ataaataatt ctgctctcac cggtttcaac atctaaaatt
      361 tccaactggc ttccaacata atctttatac ggaacaagcg ttggtggcgc cgggatcacg
      421 atccgcacat tataaaactt tcctgtttca gtcacgttcg catcatgcga acaaacgaac
      481 aagccgacgt atacgctatc gccaagatca aggcgaatac tatctgatgt aagcgtttcc
      541 ccatcgcggg caactgacat aataaacgtt gtgcctcttc tctcaagctg aaggactgcc
      601 ggctttgtta tcgaagactt tacttcctgc attgaatcat tgttatgcct tcgatactgc
      661 aaagatgtaa gcccatcccc gtgaattgcc aggcttgcgc atgcggcggt gctgtcgaga
      721 gatgctctta tcatccagcc gagtttacgg tgtgcttcgc ctccatttcc tacaagggac
      781 gcattgcacc gcaaaataaa atcacctttc atttgccggt acacgtaatg gaacccgtca
      841 tgattgaacc agatattatt gccggatcct tctaccgtgt attcctggtt ttgtgttgaa
      901 tatgtggcgg tgcctgcttt tgtgttgccg atatcaactt gcttttcaaa tatgccgatc
      961 ccgtcctgcg cattgattga acgcataaca atgcacaaag agaaaattaa gatgaccttt
     1021 ttcatgcttt gagagttagg aaaggaaggt aataaaaaaa caaagccagg aactaacaag
     1081 attcagaagt tatccgccca ggcgggagga taaacctcga taaacactac tcagggtgat
     1141 ttgacgatac gatatctacc actgcagtca cgagctcgtc aaatccttcg atattggtgg
     1201 gtttggtaat aaatttttca gcgccggcat tcaggcaaaa ttcaatgtcg gtctttgcag
     1261 atgaagtggt taatattacg acgggaatat ctttaaacgc gtcaccggat ttcagggtct
     1321 tcaggatctc tttgccatga attttaggga ggttgaggtc gagcaggatc acttccggga
     1381 gtgtagacgt ttgctgcagg tgaggaatca cttcatcgcc ttgcataact acatccatat
     1441 cgtgcaaaac atgattgtca tttaacgctt cccgaaatag ttcgacatca tcagggtcat
     1501 cttcgataag aagaatctgc agcgattttt tcattttcgc aaaaatagaa aattgtgcga
     1561 agtaattgta agtggaagcg aagtgataca accgaaggac cctaaatgtt tttgtaaaaa
     1621 aaaattacct ggtggcttca gccgcccgcc agcttcattg gtatgatatt tggcccttcg
     1681 gtaaaaaatt ataatatgaa aactaagatc tccctgggcc tcattgcttt gctgttcgta
     1741 ttcatgaatt cgtgcacaaa agattccaat tcaacgaacc agcaaggaac aaccgatatg
     1801 gcggtgagcc tgactgatgc gccgggcaat tatgatgaag taaatatcga cttgcaaggt
     1861 gtagaagtga tcaccgaatc cgaaggcacg agaaccctcg acgcaaagac cggcatttac
     1921 gatttgttaa agtatgctaa tggcgatgac accgtgatag caacaggacg gatgaaaaca
     1981 ggaatgatct cccaaatacg actcattctt ggcgacaata acactgttgt cgtggacgga
     2041 gtgagccatc acctgatcac accaagcgca gaacaatccg ggctgaaact tcagctgcat
     2101 gatgaacttg tcgctggtgt aaaatatgcg ttgacgctcg attttgacgc gaaccaatct
     2161 atcgttcagc aaggcaatgg cgattatctt ttgaaaccgg tgatccgcat tattgacgaa
     2221 gcaatttccg gatcaattca cggactcgtt acgccggata cattgcatgc gacgatcaca
     2281 gcggaaggaa acggccactc ttattcaacg atcactaatg ggtccggagc atttttatta
     2341 aaaggcattc cggaaggcac atataaagtg acaataacac caaattccgc agatcagcca
     2401 aaagttattg ataacgtaca ggtgaccaca ggcgagagca cagaccttca tacaattgca
     2461 ttctaggtca tttcattcat acacgcaaaa gccgccgcgg aattgcggcg gcttttttaa
     2521 ttcgccacat gccggtaact agttttacct acgaggtgtc cggctttttt gatttacgta
     2581 gatttgaata tggaagaaga gaaacaaaca ccaggtaaca ccgcaaaacc aaaaagccaa
     2641 actgcaggta cccggacaat atttgatgta ttcaaattca agggtgttct ctataagaac
     2701 ctggatgatc gatatgccag aaaacgtata gagagttggg tttccaggct atctgcacac
     2761 tccgcgctgg tgaaagcgct tattgattca gatggtttta ttgatatttc tcccgccaac
     2821 agcaacgctg aatacacgca tgagggaata ccggctcaac ttttttcaga agttttgaag
     2881 atcacatttc cggaatttct ttaagaagaa agaacggcgt tgatgcgacg tgatgccatc
     2941 ttcagctgaa ctccgttcca aaccaccgct cagccctgct tgatccaaaa tatttttttt
     3001 cggtaacaag tgcctctgat gcttccctgt atgttcccgt tggcgtcggg ccggaaaaaa
     3061 agttgacgtc aacccttccc acttttccct gtccaaattc gatataacat gaaccgtcgc
     3121 caagaaatgg cggtggcgca tcagcatttt caaactcagc aacgatagaa tctgcagcaa
     3181 cctttgcagc gccttctgca aaaacgcctg cctttggtgt gccaacgctg gtcacatcgc
     3241 cgacggcgta cacatttgga aaacttgttt tcaaattttt cggatcgaca gggatccagc
     3301 cgttcaccgt taacccactt tcttcaacta ccgcaggaac acggtgtttt gggataccaa
     3361 gaaacagatc gaaaggcatt tctgttccgt cgtcaagaat cgccatatga cgcgaagcgt
     3421 cgattgcgct cacatttctt tttggaatga atttgatacc tctttgctgg aacgcgtaca
     3481 acaatgcttt cgaagtatcg ggcgacggag gaattggcaa tccaaacggc atcaccaggc
     3541 tgatctcgca ttgatcccga acaccgcgtt ttacaagatg atcgtgtgtg agcaaagcgg
     3601 cttcacttgg tgccggcgga catttaaacg gcgcgcttgc tacacccacg atcacgtggc
     3661 ctttcgaaaa atttggaaga atattgcgaa gcttccttgc gcccgcaagc gaataaaatt
     3721 cattaccgcc ttctgcgaga cccggcgtcc catccatgtc ataattggcg ccgagtgcga
     3781 tcacgagcac atcggcttca tgagttcctt tatctgtcgt cacacgtttt gcaaccggat
     3841 cgatcgcaat gattgtttgc tggcagaact tcacgcctgg cttttgaatg ctgttgtaaa
     3901 aaagccggat cgcttccggc ggtttaaaac cgaacattac gtcaagcttt gaaaaaccaa
     3961 aataaaatga atcgttttga tcgatcaacg taagctcgag acgatcgccg atcttttccg
     4021 agaggattgt agtgagttcg agtccgccaa agccggcgcc aagaaccaca acgcgcagtt
     4081 tcatggtata tgtttaaaag cggaaggtac aggatgttgg aggaaaaata ttatcacgaa
     4141 tgagaagaag agcaagaaag aggagaaaag aaaatcaaat gctcaatttt caattttcaa
     4201 tgctcaataa tgtacacaaa aaatgaacat ttggtcatta aaaattgagc attgaaaatt
     4261 ttttttgaat ttcaactcgt agtatttgca gttcttagaa actttctcac gatcttttcc
     4321 tataactgaa cacggcccat ccatttaaca ccaccgcaaa tcccatgact ataaataact
     4381 gtctcttgat atcaaagaga ttgcttccct tcaacacaac catacgcatc acatcaatga
     4441 aataagaaac gggattaaac ttcgtgatcc attgtgccca cgtgggcatg ctatcgatcg
     4501 aagtgtatag cccac
//
LOCUS       DASQJI010000634         9056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3001403,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000634 DASQJI010000000
VERSION     DASQJI010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9056
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3001403"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..78)
                     /locus_tag="VEV83_17170"
     CDS             complement(<1..78)
                     /locus_tag="VEV83_17170"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HYK46914.1"
                     /translation="MLHAKQGDTVKVHYHGRLTDGSTFDS"
     gene            complement(545..628)
                     /locus_tag="VEV83_17175"
     tRNA            complement(545..628)
                     /locus_tag="VEV83_17175"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(592..594),aa:Leu,seq:caa)
     gene            1202..3436
                     /locus_tag="VEV83_17180"
     CDS             1202..3436
                     /locus_tag="VEV83_17180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HYK46915.1"
                     /translation="MNETPTPQIDLWGGLECTINRVGNEYFDQLEYSGHYTRKDDVDR
                     IATIGVKKLRYPVLWERHQPLKDQKPDWSFATNNLNRLRDLGITPIAGLVHHGSGPAY
                     VNFFDGSFEQGLADYAWLVAKEFPWLNYFTPVNEPLTTARFCGLYGLWYPHKKNDYAF
                     ARILVSECKGIVMAMQAIRRINPTAKLVQTDDLAKVHSTASLQYQADFENERRWLAFD
                     LVSGHVTPDHPMWAYLTWAGIDESELYFFLNNACKPDIIGLNYYVTSERYLDDNLENY
                     PLHTHGRNHFHAYADVEAVRVSSDVFEGPYPLLREASTRFDQPIAVTEAHLNCHREEQ
                     MRWFHEIWQAATQLKEEGKKIEAVTAWALLGSFGWNRLLTEKNGEYEPGVFDVRPGQL
                     RTTGVAKMLARLTTGEQHIHPVLQDHGWWKRNIRVEYRIPVGARELVTQEVFDPVNSS
                     RPLLILGKTGTLGNAFARICKQRNIQYKLVGRDEVDISKPQTIERALKDLNPWAVINT
                     AGYVRVDDAELDMDNCYLANTTGPMYLARSCAIHGVQLVSFSSDLVFDGKKMAAYQEA
                     DQVNPLNVYGRSKAIAEKYILESCPDALVIRTSAFFGPWDNYNFLAAASQTFKKGMPF
                     PVAKDVVVSPTYVPDLVHTTLDLLLDGERGIWHLTNEGEITWAEFAMAAFDRFGYDKN
                     LLQTKLLKEMSFAAPRPYYSALKTIKGVKLPSLENALERYFAERGDESSENEVQPSAE
                     RSRA"
     gene            3598..4110
                     /locus_tag="VEV83_17185"
     CDS             3598..4110
                     /locus_tag="VEV83_17185"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HYK46916.1"
                     /translation="MNKLHFIAVIAVLIAACEDKSTDRTSLNSADKLFLQEVSYSNHA
                     EIVEGGIAVANGNLDTVKEFGNMMIADHSPAQAELESLAGRLGVDIPSTADTAHQSRA
                     VLLQSLSGNVFDTTYIGGQVRDHKYTISIFDEELQYGNNLEIINYANKYLPMIQRHLK
                     EAQDIDDLLH"
     gene            4140..4379
                     /locus_tag="VEV83_17190"
     CDS             4140..4379
                     /locus_tag="VEV83_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46917.1"
                     /translation="MGMNVNPQHQEGPVARAIEEQTAKLPSDLFLWTSLSAMAVSLTL
                     QLFGKRHTSLFLGQWAAPFLILGMYNKLVKQNGHD"
     gene            4457..5113
                     /gene="deoC"
                     /locus_tag="VEV83_17195"
     CDS             4457..5113
                     /gene="deoC"
                     /locus_tag="VEV83_17195"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HYK46918.1"
                     /translation="MQLNKYIDHTALGPAVLLSQIETLCGEAVEHDFAAVCVPPPMVA
                     SAKNFLEGSAVRVATVIGFPFGYSAIEAKIAEIVLAIVDGVDELDMVINILALKNNDW
                     QFLANEINHVMRVVKQKNKVIKVIVESGLLSDEEIIRCCELYGNAGVDFLKTSTGYAS
                     VGATVHAVQLMRSHLLPHVQIKASGGIRSYAFAKELLDAGATRLGTSNSLAVIQQTFK
                     "
     gene            5156..5578
                     /locus_tag="VEV83_17200"
     CDS             5156..5578
                     /locus_tag="VEV83_17200"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HYK46919.1"
                     /translation="MVFRLLIIAILFSGSAFASSRDTIIVHKDPRLDIFTAKQASINK
                     VTARMSSNGLFKGYRLQVLNTRSRDDAFKTKAMLLENFPDEKTYVLYQSPYFKVRIGN
                     FVNRNDAENFKKELSLFITQPAYVVEDLIEYIPRADEF"
     gene            5593..6774
                     /locus_tag="VEV83_17205"
     CDS             5593..6774
                     /locus_tag="VEV83_17205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HYK46920.1"
                     /translation="MTPEKIKSLAKQYALVLADIRHHLHANPELSFKEFETCRFISSK
                     LSEWNIPYKNIATTGAVALIEGNNPSKRIVALRADIDALPITEQNDVEYKSKNEGVMH
                     ACGHDVHTTSLLGAAKILNETKNEWEGTVKLIFQPGEERNPGGASIMIKEGVLEDPKP
                     QAIVALHVHPGLPVGKLSFRSGLVMASSDEIYITVRGKGGHAASPHLTVDTILVASQI
                     VVNLQQVISRNNNPFTPSVLSICSFQGGNSTNVIPQEVKLIGTFRAMDENWRYKAHEL
                     IEKQVKEIAHALGAEVDINIDVGYPGVYNDADVTAEAIKLAGAFSGAANVEQTELRMG
                     SEDFGFYAQKIPACFFRLGVGNVSKGIVYNVHTPTFNIDEAALETGAGIMAWLGMNLN
                     A"
     gene            6831..8516
                     /locus_tag="VEV83_17210"
     CDS             6831..8516
                     /locus_tag="VEV83_17210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HYK46921.1"
                     /translation="MTANNSFIANQFSLLSKLLELHGDNPFKVRAYSSAARLIDKLPQ
                     EISKLPPGKLASIKGIGDSVAKKIKEIFDYGEIKALTELVHKTPPGVLEMLKVKGIGA
                     KKIAVIWKKMGIENVGELLYACNENRLTRYSGFGEKTQEAIQESIEYYLNNIGSYLYA
                     RVEDLAAALDQILKKQFKKYQFFQTGDIRRHLEVIDKLEWVTDAPAASLQSFLEKNNF
                     AAEKLDAEQSIFRGKSDNTQLIFYHASSGQLYQKLFLTSGSEEFLQAWNKKSRFKKSE
                     SYASEEEIFSSAKVKFIPAYLRETAEIIERARKNDLPVVIQPEDITGIIHCHSKWSDG
                     LNTIEEMAEVAIEKGLQYLVISDHSKTAIYANGLSEERIQAQHEQIDELNKKLKPFRI
                     FKSIESDILNDGSLDYPPDVLARFDLVIASIHSNVKMSEDKAMARLLNAVKNPFTSIL
                     GHCTGRLLLSRNGYPVRYNELIDACAKHNVAIELNANPRRLEIDWRHINYCLEKKVLI
                     SIDPDAHSTGAFDHTRYGVLAAQKAGVTKANNLSSFSLKEFEGFLKKQHVKRK"
     gene            complement(8729..>9056)
                     /locus_tag="VEV83_17215"
     CDS             complement(8729..>9056)
                     /locus_tag="VEV83_17215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HYK46922.1"
                     /translation="VITYLNPLDAETLRSILTEPKNSLIKQYTRLFEMENIQLTVDEE
                     ALGFMVQKAMEFKLGARGLRSICEHILTDAMFEMPGTGKKELHVTLDYATKKFDKSKL
                     SKLKVA"
BASE COUNT         2637 a         1946 c         2096 g         2377 t
ORIGIN      
        1 gctatcaaat gtactcccat cagtcagtcg tccgtggtaa tgaactttta ctgtatcacc
       61 ttgtttcgcg tgtagcatac attctttttt aaagattaat ttatccgcgc aaaaaaagca
      121 ccaacatttt gcagcgctgt ctatctaaaa cgaattaaaa aaaaaacctt cagttagcct
      181 gagggtaatg gcaagaaagg ctctgcgtta ctgtatcatc cggcaccctt caatttttgg
      241 caaaacaaaa acgaaaaagt tttgtcctca gcgaatcgtt tgtgttcacg aaaggaatcc
      301 ctgcctgacg agtcacgctg gcagggaacc ttcactctcc acatcaaata agaaattcag
      361 ctatgctgaa tattgtgccc acgaaaggaa tccctgcctg actgcgtcac gctggcaggg
      421 aaccttcact ctccacgtca aataaaaaat tcagctatgc tgaatattgt gcccacgaaa
      481 ggaatccctg cccgactgcg gcacgcaggc ggggaacctt cactctgcct cgcacatgaa
      541 gttgtgccca cgaaaggaat cgaaccttca ctctcttgcg agaaccagat tttgagtctg
      601 gcgcgtctac caattccgcc acatgggcct ttatttgaaa tggggtgcaa taatacgccg
      661 ctaatttaga tcacccaaat cagcattatt cgcaacactt tttctttgga aaaaaaattt
      721 tcctaaaaaa cttccatatc gtcgtcatga ctttcattcc ttacgcaggc ttgcaaaatt
      781 acagccatac gagcataata agaattagat ctagccggta attcccagtc gcaatggcat
      841 ccgcataaat tccacgtaca atcatcttta ttatgatgaa aatttatcta cacagcgcat
      901 ttttttagcg atgcaaaaag cgtttaatct tttttttgat ctgaatgtcg ccggcacgag
      961 caacaggcgc ctgcttagta tcatttctta ttgaatctga acggaatacg gctggagcgc
     1021 tttgttttcg catgcaggaa aatggtattc tgccggttac attcatccga tcaggcgcat
     1081 tttgatttgc gatgcacctg cattttcacg tttggcacaa tgtttaagtt atagctcttg
     1141 atccggggga ggaatttctg tacatgcgtt gtcagaaact ttgttaacca agaagatcga
     1201 tatgaatgaa acaccgactc cgcaaataga tttatggggg ggccttgaat gtactattaa
     1261 ccgtgttgga aacgaatatt ttgatcaact ggaatattcg gggcactata cacgaaagga
     1321 tgacgtcgat cgcattgcga caattggcgt aaaaaaatta cgatacccgg ttttatggga
     1381 aagacatcag ccacttaaag atcaaaagcc agactggtca ttcgcaacaa ataatctcaa
     1441 ccgtcttcga gacctcggca tcacaccaat agccggattg gttcaccacg gaagtggtcc
     1501 cgcgtatgta aatttttttg acggaagctt cgaacaaggt ttggccgatt atgcctggct
     1561 cgtggcaaag gaatttccat ggttgaacta ttttacaccg gtaaacgaac cgttaaccac
     1621 cgccaggttc tgtgggctat atggcctgtg gtatccgcac aaaaaaaatg attatgcatt
     1681 tgcacgcatc ctggtgagtg aatgtaaagg gattgtaatg gctatgcagg caatacgccg
     1741 cataaatcca actgcaaagc ttgtccaaac agatgatctc gctaaggtac acagcacggc
     1801 gtcgttgcag taccaggcag attttgaaaa cgaacgcagg tggcttgctt ttgatcttgt
     1861 ttccggacac gttacgccgg atcatcccat gtgggcttat ctcacatggg caggcatcga
     1921 tgaaagcgag ctttatttct ttttgaataa cgcctgcaaa ccggacatta tcggtttaaa
     1981 ttattatgtg acttccgagc gctatctcga cgataacctg gaaaattacc ctctacatac
     2041 acatggacgt aatcactttc atgcatacgc agatgtagaa gccgtgcgag ttagctcaga
     2101 cgtttttgaa ggaccgtatc cactactcag agaggcctct acgcgatttg atcagcctat
     2161 cgcagttaca gaagcgcacc tgaactgtca tcgcgaagag caaatgcgct ggttccacga
     2221 aatttggcag gcagcaacgc aattgaaaga agagggtaag aaaattgaag cggttaccgc
     2281 ctgggcactg cttggttcgt ttgggtggaa caggttgctt acagaaaaga atggggagta
     2341 tgagccgggc gtttttgacg tccgcccagg gcagctgcga acaaccggtg ttgcaaaaat
     2401 gttggcgcgg ctgacgactg gcgagcagca cattcacccg gtgttacaag atcatgggtg
     2461 gtggaaaaga aacatcagag tggaatatcg tattcccgtc ggtgcccggg agctggtgac
     2521 acaggaagta ttcgatcccg ttaacagttc acgaccattg ttgatactcg gcaagacagg
     2581 cacattggga aacgcgttcg cacgcatctg caagcaaaga aatattcaat acaaactggt
     2641 tgggcgcgat gaggtggaca ttagtaaacc gcaaacaatt gaacgggcat tgaaagactt
     2701 gaatccctgg gctgtgatca atactgcggg ttatgtacgc gttgatgacg ccgaattgga
     2761 tatggacaac tgttatctgg caaacactac cggcccgatg tacctggccc gatcgtgcgc
     2821 aatacacggt gtccaattgg taagtttttc gtccgacctt gttttcgacg gtaaaaagat
     2881 ggctgcttac caggaggccg accaggtaaa tccattaaat gtctatggtc gtagtaaggc
     2941 gatcgctgaa aaatacatcc tcgaatcgtg tccggatgca ttggtcataa gaaccagcgc
     3001 attcttcgga ccgtgggata attacaattt tttggccgct gcctcgcaga cttttaaaaa
     3061 aggaatgcca ttcccggtag cgaaagacgt agttgtttca cctacgtatg ttcccgattt
     3121 ggtgcataca acgcttgacc ttctgctcga cggagaacgt ggaatttggc atttaacaaa
     3181 tgaaggagag atcacgtggg ccgaatttgc gatggcggct tttgataggt tcggttatga
     3241 caaaaatttg ttgcagacga agctattaaa ggaaatgtca tttgccgcac cacggccata
     3301 ctacagtgcg ctgaaaacaa taaaaggagt gaagctgccg tctttagaaa atgcccttga
     3361 gcgttatttc gcagagcgcg gtgatgagtc gtcagaaaat gaagtacagc cgagtgcgga
     3421 aagatcaaga gcttaaaaga taaaaagata tacaatccgc tctacattgt ggttgcttca
     3481 agtatttttt tcaacagtta tttatttagt tttttatttc tgttattttc accgcaccat
     3541 gcatgctttt tgttttaaac attgctggcc tattttcata tcttgaaaaa tccgagcatg
     3601 aataagctac attttattgc agttatcgct gtgctgatcg cggcgtgtga agacaaatca
     3661 actgatcgta caagtttgaa ctctgcagat aaacttttcc tccaggaggt tagttattcg
     3721 aatcatgcag agatcgtgga aggaggtatc gccgttgcaa acggtaattt agataccgtt
     3781 aaggagtttg gcaatatgat gatagctgac cacagtccgg cgcaggccga actagaatca
     3841 ctcgccggtc ggttgggtgt tgacatccca tcaacagcgg atactgcgca ccaatcaagg
     3901 gctgtattgc tccaatcgct atccggaaat gtctttgaca ccacttacat aggtgggcag
     3961 gtgagagatc ataaatacac gatctccatt tttgatgaag agttgcaata cggcaataac
     4021 ctggaaatta tcaattacgc aaacaaatac cttcctatga tccagaggca cttgaaggag
     4081 gcacaggaca tagatgattt gctgcattaa aaatattgtt cacttttaaa ataagagtta
     4141 tgggtatgaa tgtcaatccg caacaccagg aaggaccagt agcacgggct attgaagaac
     4201 aaacagcaaa gcttccgtct gatctttttt tatggacgtc actgagcgcc atggcggtgt
     4261 ctctcacctt acagttgttc gggaaaaggc atacaagttt attccttggt caatgggcag
     4321 cgccattttt aatcctcggc atgtacaata agcttgtgaa gcagaacggc catgattaga
     4381 ggtatcagca ggcaacaaaa aagcaatctc ccacgaggtt gcttttttta tttttcgata
     4441 ctttcatctt tgagtgatgc aattaaataa atatatagat cataccgcgc ttggcccggc
     4501 cgtcttgctg tcacagattg aaacgctttg cggagaagca gtcgaacacg acttcgccgc
     4561 tgtttgtgtg ccgccaccaa tggtcgcatc agcaaaaaat tttttggaag gttctgcagt
     4621 aagggtggcc actgtaattg ggttcccgtt tggttactct gcaattgaag cgaaaatagc
     4681 tgagatcgtt ttagccatcg ttgacggtgt tgatgagttg gacatggtga tcaacatact
     4741 cgctcttaaa aataatgact ggcaatttct cgcaaatgaa attaaccatg taatgcgtgt
     4801 tgtaaaacaa aaaaacaaag tgataaaagt gatcgtcgaa agcggacttc tatcggacga
     4861 agagatcatt cgctgttgcg aattgtatgg caatgccggg gtcgattttt taaaaacctc
     4921 aaccggttat gcatctgtcg gcgcgacggt acacgcggtg caattaatgc gcagccacct
     4981 gcttccgcat gtacaaataa aagcatcagg aggcattcgc tcatacgcat ttgcgaaaga
     5041 actgcttgac gccggtgcaa caagattggg caccagcaat agcctggccg ttattcaaca
     5101 aacttttaag tgatggcccg gttttagttg ttgggaattc gtttattttg cttccatggt
     5161 gttccgcttg ttgatcattg caattttatt ttcaggatct gctttcgcaa gttcccggga
     5221 tacgatcatc gttcataaag atccccgcct tgatattttc actgcaaagc aggccagcat
     5281 caacaaggtc acggcgcgaa tgtcgagcaa cggtttgttc aaaggttatc ggttgcaggt
     5341 actgaataca cgtagcaggg acgatgcatt taaaacgaaa gcaatgttgc ttgaaaactt
     5401 ccccgacgaa aaaacttatg ttttatatca atcaccttac ttcaaagtga gaataggcaa
     5461 ttttgtaaat cggaatgacg ccgaaaactt taaaaaagag ttgagcttat tcattacaca
     5521 accggcttat gtagttgaag acctgatcga atatatacca agggctgatg agttttgaat
     5581 tctccttcct ttatgacacc tgaaaaaata aaatcacttg caaaacagta cgcgcttgta
     5641 ctcgccgata ttcgccatca tttgcatgca aaccctgaac tgagctttaa agaatttgaa
     5701 acatgcagat tcatcagtag taaattatca gagtggaata ttccatacaa aaacatcgcc
     5761 accaccggcg ctgttgcgct gatcgagggg aataatcctt cgaaaagaat tgttgccctc
     5821 cgtgcagaca tcgacgcatt gccgatcacg gaacaaaacg acgtggaata taaatcaaag
     5881 aacgaaggtg tgatgcacgc atgcgggcat gatgtgcata caacaagtct tttaggcgca
     5941 gcaaagattt tgaatgaaac aaaaaacgaa tgggaaggga ccgtaaaact tatttttcag
     6001 ccgggtgaag agcgaaaccc gggtggtgcg agtatcatga taaaggaagg tgtattggaa
     6061 gatccgaaac cacaggcgat agtggctttg catgtacatc ccggtctgcc tgttggaaaa
     6121 ctaagtttcc gaagcggcct tgttatggca agctcagatg aaatttatat aacagtgcgg
     6181 ggtaaaggcg ggcatgcggc ttctccgcat ctcacagttg atacgatcct cgttgcatcg
     6241 cagatcgttg taaatcttca gcaagttatc agcagaaata ataacccgtt cacgccttct
     6301 gtgttatcga tttgcagttt ccagggtgga aattccacca atgttattcc gcaggaagta
     6361 aagttgatcg gcacattccg ggcaatggat gaaaactggc ggtataaggc gcacgagttg
     6421 attgagaagc aagtgaagga aatcgctcat gcactcggcg ccgaagttga catcaacatt
     6481 gatgtgggtt acccgggagt atataatgat gccgatgtaa ccgctgaagc gataaagctc
     6541 gccggcgcat tttccggagc tgcaaatgtt gaacagactg agttgagaat gggttcggaa
     6601 gacttcggct tctacgccca aaagatcccg gcttgttttt tcaggcttgg tgtgggaaat
     6661 gttagtaaag gcattgtgta caatgtgcat actcccacct ttaacatcga cgaagctgcg
     6721 ctcgaaacgg gcgccggcat catggcctgg ttgggaatga atttgaacgc ttgatcgttt
     6781 tatcacaggc cgaaagtctc atcaattagc cacgatgtaa tttcgccgcg atgaccgcga
     6841 acaattcctt catcgcaaac cagttttcgc ttctttccaa attgctggaa ctgcatgggg
     6901 acaatccttt caaagtaaga gcatactctt cggccgcacg tttgatagat aaactgccgc
     6961 aggaaatttc aaagcttccg ccgggtaagc ttgcttcgat caaaggcatc ggcgattccg
     7021 ttgcaaaaaa aataaaagaa atatttgact acggcgagat caaagcgctc actgaactcg
     7081 tccataaaac gccgccggga gtgctcgaaa tgttgaaggt gaagggcatt ggtgcaaaaa
     7141 aaatcgccgt catctggaaa aaaatgggca ttgaaaacgt cggtgaattg ctgtatgcat
     7201 gcaatgaaaa tcgtttaacg cgctatagtg gctttggcga aaaaacacaa gaggcgatac
     7261 aggaatcgat tgaatattat cttaacaaca tcggcagcta tttgtacgcg cgtgtggagg
     7321 atctggcagc agccctggac caaatcttaa aaaagcaatt caagaagtat cagttttttc
     7381 agacgggcga tattcgccgc catctggaag tgatcgacaa acttgaatgg gttaccgatg
     7441 cgcccgctgc aagcttgcaa tcttttctgg aaaaaaacaa ctttgctgcc gaaaagctcg
     7501 atgcagagca atcgatcttc aggggcaaaa gcgataacac acaattgatc ttttatcacg
     7561 cttcgtccgg gcaattatat caaaaattat ttttaacgtc aggcagcgag gaatttttgc
     7621 aggcatggaa caagaaatcc cggttcaaaa agtctgagtc atatgcttcc gaagaagaaa
     7681 tattttcttc cgcgaaagtg aaattcattc cggcctacct gagagaaact gctgagataa
     7741 ttgagcgcgc gcggaaaaat gatctacccg tcgttattca accagaagac attaccggca
     7801 ttatacactg tcattcaaaa tggagcgacg ggctcaacac aatcgaagaa atggcagagg
     7861 ttgctatcga aaaaggactg caatacctgg tgattagtga ccactctaaa acagcgatct
     7921 acgcaaacgg actttcagaa gaaagaatac aagcccagca tgagcagatc gatgaactga
     7981 ataaaaaatt aaagccgttc cggatcttta aaagtatcga aagtgatatt ttgaatgacg
     8041 gcagcttaga ttatccgccg gatgtactcg cgcgctttga cctggtcatc gcatctattc
     8101 attccaatgt gaagatgagc gaagacaaag cgatggcacg tttactaaac gcagtaaaaa
     8161 atcctttcac ctccattctc ggtcactgca ctggaaggct gttgctgagc cgaaatggtt
     8221 atcctgttag atataatgaa ttgatagatg cctgtgcaaa acacaacgtg gctatcgaac
     8281 tgaatgcgaa tccgcgccgt ctcgaaatag actggcgtca tataaattat tgccttgaaa
     8341 aaaaagtact gatctctatt gatccggatg cacattcaac cggcgcgttt gatcatacca
     8401 gatacggagt gcttgcggcg cagaaagcgg gtgtaacaaa ggcgaataat ttaagcagtt
     8461 tttcgcttaa ggagtttgaa ggattcttga aaaaacagca tgttaaaaga aaataagaac
     8521 aattgttttc tcacagatgc gtgtccgcaa ctgctgcaac gtgcagaaac ttgcaaccag
     8581 aaactggcta gaagaattgt tttctcacag atgcagatga tcacagaaat attacgtgat
     8641 gacgagggaa actttacttg tgatgtggga acatctggga aatgagttta caaaaccagc
     8701 aacctaaaac ctgaaacttg caacccgcct atgccacctt caacttgctg agtttgctct
     8761 tatcaaactt cttcgttgcg taatcgagtg taacgtgcag ttcttttttt ccggtacccg
     8821 gcatttcgaa catcgcgtcg gtgagaatat gttcgcagat gcttcttaaa cctcttgcac
     8881 cgagtttaaa ctccatagcc ttttgaacca taaacccgag tgcttcttca tccaccgtga
     8941 gttgaatgtt ttccatttcg aagaggcgcg tatattgttt gatgagactg ttcttcggtt
     9001 cggtcaatat agaacgcagt gtttctgcat caagtggatt gagataagtg atcacg
//
LOCUS       DASQJI010000635         4148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_238553,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000635 DASQJI010000000
VERSION     DASQJI010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4148
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238553"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VEV83_17220"
     CDS             complement(<1..450)
                     /locus_tag="VEV83_17220"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HYK46923.1"
                     /translation="MKRTFLLLLVIQCCLSLSVFSQGGGGVKNGDLAPNFTAKDQNGN
                     TVSLSQFKGKKVVLYFYPKDFTSGCTAEACNLRDNYDSLTKAGYTILGVSTDDQVSHK
                     NFETTYKLPFTLIADVDTSINKQYGVWVEKDRDGQKFWGTARTTFIID"
     gene            728..1600
                     /locus_tag="VEV83_17225"
     CDS             728..1600
                     /locus_tag="VEV83_17225"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK46924.1"
                     /translation="MNRRSFLGTAAAGLAASGLASSIPGAVFAIGENNGIDMPIGFQS
                     YVFRNEISQQPHETMSRLAGYGYKNMEWCSPKSYEEFAPLAKYSGKELKKITNDAGLE
                     TTSCHFQWKEMTDDASLAERIEFAHQLGLKCMICSSGLMGKTEDEVKQHCEQLNHAAE
                     MVTKGGLVAGYHNHNGEFDQKFDGRPQYDIMLEHLDPSVVKMQFQVAAITSGYKAQDY
                     FRKFPGRFISAHLQDFSPTDNKKQVVMGTGIVDWKDFFAAAKVGGLKYVFVEMESDPT
                     IMQGCADYLKNFRS"
     gene            complement(1842..2657)
                     /locus_tag="VEV83_17230"
     CDS             complement(1842..2657)
                     /locus_tag="VEV83_17230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46925.1"
                     /translation="MKKKLKRILKIAFLAVSAAILMIASILLFPQELFAKKISYKKFT
                     VYSNENVDNHIKIVLDDALALIQRSELYDSNYTYNIILCNGSVYDKIDDKLLGVGRTA
                     RATLENVIIKVRIDPNQNLAFPTFHKSCEENLTKLIAHEMIHCLQANKYGLLKFNPFR
                     HPEFWKLEGYPEYVSKCNGLSNEEHDLRSDIDRYLKLESEAKDIWILSEDGGCEIPDY
                     YYRGRLMIEYLIDIKHLSYDQVLNDTTSESTIYREMISWNESIKPWKVNKAGY"
     gene            3008..3367
                     /locus_tag="VEV83_17235"
     CDS             3008..3367
                     /locus_tag="VEV83_17235"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYK46926.1"
                     /translation="MLEKVNWESVPTEEVTPSMHRKIVTGEKLMVAKMKFKDGFLVPL
                     HHHVHEQVTQVLSGQIRFWFGENKEQVMDLYSGDVVVIPSNLPHEALMIGDVEEVDTW
                     SPPRQDWLDKTDDYLRR"
     gene            3370..4134
                     /locus_tag="VEV83_17240"
     CDS             3370..4134
                     /locus_tag="VEV83_17240"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK46927.1"
                     /translation="MELGLNNKVAFVAASSQGLGRSVALELAQEGARVIICGRNKDTL
                     QKTKEEIEKQADKEVLAIAGDLSVADEREQVIKTALQRYNCIDVLVTNSGGPPPGKIE
                     DFGQGDWDKAYNQLLSSVVGLINGFLPGMKKQRWGRIISITSMVIKQPVDNLILSNSV
                     RASVAGLTKSLSNELAMYNITVNNVMPGYTETERLKQLIEKNPSFASATTEIPLGRFG
                     KPEEFAAAVAFLASERASYITGVSLAIDGGWTKAIF"
BASE COUNT         1165 a          878 c          945 g         1160 t
ORIGIN      
        1 gtcgatgata aacgttgttc gggccgttcc ccaaaacttc tgtccgtctc tatccttttc
       61 cacccaaacg ccatattgtt tgttgatcga cgtatcaacg tccgcaataa gggtaaaagg
      121 cagcttatac gtcgtctcga agttcttatg cgaaacctgg tcatcggtgc tcacgccaag
      181 aatggtgtac ccggctttgg ttaatgaatc gtaattatcc cgcaggttgc aggcttctgc
      241 cgtacatccg gacgtaaaat cttttggata aaaataaagc accactttct ttcctttaaa
      301 ctggctgagg gaaacggtgt ttccattttg gtcttttgcg gtaaaattcg gagccagatc
      361 accgttctta acgcctccac ctccctgcga aaatacagac agactcagac agcattggat
      421 caccagcaaa agcaaaaacg ttcttttcat acgttataat tttaatttaa atcaaagtgc
      481 agccgatgat aaatgtacaa taaacgctcc tgattccctt ccttcgcgat ctcgtcggat
      541 tcgttcgtgt cgttgccccg gaatcatact gtttcagatg acaacatctg cagcggaaac
      601 gttccttaaa gagaacatgt taaacacgaa aaaaaatatt tacagttttg acccgtaaac
      661 tgacgaccgt caagcattaa ttgtcaacag tgatttaact ttataaattc accacaaaac
      721 cagtgtcatg aacagaagat ctttcttagg tacggcggct gccggccttg ctgcatcagg
      781 attagcctca tcaattcctg gcgccgtgtt tgccatcggg gagaacaacg gcattgacat
      841 gccgatcggc tttcagtcgt atgttttccg gaatgaaatt tcacagcaac cgcatgaaac
      901 gatgagccgg ctcgcaggtt atggctacaa aaacatggaa tggtgcagtc ccaaaagtta
      961 cgaggaattc gctcctcttg ctaagtattc cggcaaagaa cttaaaaaga tcaccaacga
     1021 tgcgggcctg gagactacca gttgtcactt ccaatggaag gaaatgacgg atgatgccag
     1081 cctcgccgag cggatcgaat tcgcgcacca gttgggcttg aaatgcatga tctgttcaag
     1141 cggacttatg ggcaagactg aagacgaagt aaagcagcat tgcgaacagt tgaatcacgc
     1201 ggcagagatg gtgactaaag gtggcctggt ggcggggtac cataatcaca acggcgaatt
     1261 tgatcagaaa ttcgacgggc gcccgcaata tgatattatg ctcgaacacc tggatccatc
     1321 agttgtgaaa atgcagttcc aggtagctgc gatcacatcg ggttataaag cgcaggatta
     1381 ttttcgcaaa ttccccggcc gttttatttc tgcacatctc caggacttta gtccgacaga
     1441 taataagaag caagtggtta tgggtaccgg tatcgttgac tggaaagatt ttttcgccgc
     1501 cgcaaaagtg ggtggactaa aatatgtgtt tgtcgagatg gaatctgatc ccaccattat
     1561 gcagggatgc gctgattatc ttaagaactt tcgatcataa aatatcgacg caaagtttga
     1621 agcacaatag ggcatagagc acaatagctg gcagatgcct ggactgaatt tttttgcatt
     1681 cagattttct tatcgaaagt ctagcttctt caacttcggc aacaagtact caatttcaaa
     1741 tggaatagct gttttgctac taaaagttct ccgtacacat ttttacagag tcagcgtccg
     1801 acaaattatc cttcgtcatg aataccgggc gatctatcaa atcaatatcc agctttattg
     1861 accttccagg gtttaatgct ctcattccag cttatcattt cgcggtaaat cgtgctttct
     1921 gaagttgtgt cgttaagcac ctggtcgtac gacaagtgtt tgatgtcgat cagatattcg
     1981 atcatcagcc tgcctctgta ataataatcc gggatttcac atccgccgtc ttctgacaag
     2041 atccaaatat cttttgcttc actttccagt tttaggtacc tgtcgatgtc gcttctcaaa
     2101 tcatgctcct cgtttgaaag cccattgcac tttgaaacat attccggata gccttctaac
     2161 ttccaaaatt ccggatgcct gaaagggttg aatttaagta gtccgtattt gttagcctgc
     2221 aggcaatgga tcatctcgtg cgctatcagt tttgtcaaat tttcttcgca agatttatga
     2281 aacgtgggga aagccaggtt ttggtttgga tcgattctta ccttgataat cacattttcc
     2341 agtgttgctc tcgcggtcct tccgactcct aaaagtttgt cgtcgatctt gtcataaact
     2401 gagccattgc aaagtataat gttgtaggta taatttgagt catatagttc agatctttga
     2461 atgagagcca acgcgtcatc cagcacaatc tttatatggt tgtctacatt ttcgtttgaa
     2521 taaaccgtga attttttata ggagatcttt tttgcaaaca gttcttgcgg aaataagaga
     2581 atacttgcta tcataaggat cgctgctgat actgcgagga atgcaatttt gagaattctt
     2641 tttaatttct ttttcatgga attttactca ttcattaagt accggtgcac ggggcaccgc
     2701 tcgctaaaaa tagttttatg gcgtttcctc acgactataa aattatgaac gatgctccgt
     2761 atttccctgc gtcttgtttt aaagagaagt tgaaatgttc aggattgtgc tataactgat
     2821 cttttcggtt ggcgatctat agaaacggac gagagctgaa aaaacctgtt taagacgcta
     2881 tatcattcca ttgaaatatg tcaggccgat ggctgcggac cacgcaggtt gtgcacgaaa
     2941 gcatatgtgg gcgatgtcac atcaaagcga taacttagtt tgaagttttg aaacaaatac
     3001 gttaatcatg ttagaaaagg taaattggga atcagttcca acggaagaag taactccttc
     3061 aatgcatcgt aaaattgtta cgggtgaaaa actgatggtc gcaaaaatga agttcaaaga
     3121 cggtttttta gtaccgttgc atcatcatgt gcatgaacag gtaacgcagg tgttatcagg
     3181 gcagatacgt ttttggtttg gcgaaaataa ggaacaggta atggacttgt attcgggcga
     3241 tgttgtagta attccatcaa acttgcccca cgaagcgctc atgatcggcg acgttgagga
     3301 agtcgacaca tggtcgccgc cgcggcagga ctggttggat aaaacagatg attacttaag
     3361 gagataatta tggaacttgg attaaataat aaagtggcct ttgtggccgc ctcgagccag
     3421 ggcctcggca gaagcgttgc gcttgaactt gcacaagagg gcgcgcgcgt aattatctgc
     3481 gggcgaaata aagacacact gcaaaaaacg aaagaggaaa ttgaaaagca ggccgataag
     3541 gaagtgcttg ctattgccgg cgacttgtca gttgctgatg aacgggagca ggtgatcaag
     3601 acagcattgc agcgctacaa ctgtatcgac gttctcgtca caaattccgg tggccctccg
     3661 ccgggaaaaa tcgaagactt tggccagggt gattgggaca aagcttacaa ccagctcctg
     3721 tcaagtgttg tggggctgat caatggtttc ctaccgggca tgaaaaaaca acgatgggga
     3781 cggatcattt ccatcacatc aatggtgata aagcaaccag ttgacaatct tattctttcg
     3841 aactcagtca gggcctcggt tgccgggtta acaaaaagtc tttcgaatga attagccatg
     3901 tataatatca cagttaataa tgtgatgcca ggttatacag aaactgaacg gttgaaacaa
     3961 ttgatcgaaa aaaatccctc gtttgcatcc gcaacaactg aaataccgct aggccgtttt
     4021 ggtaagccgg aagaatttgc agccgccgtt gcatttttgg ccagtgaacg cgcgagttac
     4081 ataacaggcg tttcgctggc gatagatggc ggatggacaa aagcgatctt ttaaatgttt
     4141 tggctgat
//
LOCUS       DASQJI010000636        10540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_543962,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000636 DASQJI010000000
VERSION     DASQJI010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10540
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_543962"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..834)
                     /locus_tag="VEV83_17245"
     CDS             complement(4..834)
                     /locus_tag="VEV83_17245"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HYK46928.1"
                     /translation="MPVVTLSTDIGQSDYVIGAIKGQLLQAAPYVSLVDITHQLISNN
                     YLHAAYVCTNAFSFYPAGTFHFVIINLFEKRPEHLLLAKYKDQIIVCPDNGILTMIAG
                     EKPPCVSAISIKKQAALGVLNCTAAFADMLRAIDGGASVDEIGKPISNIEEKYPFRST
                     TGPDWIDSQIIFIDQFENVVINLTKDEFEEHRKGRKFKIVLPTRNDGGIEEISENYAS
                     VEQGERLAWFNSAGYLELAINKGNLAGLFGLRRFSGGTTLNTLPQNKLMYERVKIFFE
                     "
     gene            complement(861..1667)
                     /locus_tag="VEV83_17250"
     CDS             complement(861..1667)
                     /locus_tag="VEV83_17250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK46929.1"
                     /translation="MGYFTDKVVVVTGGTDGIGKALVNTLMTQGAKVVTCGRSHDKLY
                     RLQTIYAGKTLLALPADVSNEADCKNIIEQAVSVFGTVDILINNAGISMRALFSETDL
                     ETIRRVMDINFWGPVYCTKYALPYLLKQKGTMVGISSIAGYRGLPGRTGYSASKFALQ
                     GWMEALRTEMLETDVNIMWVCPGFTKSNIRNAALDKNSEPQGETTLDEDSLMSAEECA
                     EHILHAVEKRKRTLILTRQGRETILLNHLMPSLADKKVHKFFFKDGVLVK"
     gene            complement(1907..4855)
                     /locus_tag="VEV83_17255"
     CDS             complement(1907..4855)
                     /locus_tag="VEV83_17255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease family protein"
                     /protein_id="HYK46930.1"
                     /translation="MKKILLLTSMLALINVLGFSQTDRFWSANNENPANITKAKAVSR
                     LSYPKEFKLFDLNATTIRQELFAIVDHSTKHSAIITLPNADGKLEQFEVVESSNFEPA
                     LQKQFPLIRAFSGRGITDKYATVKLSISPQGIQTMVFRTDKDDEFIEPYSSDHRVYSV
                     FSSHREKGKLPWVCSTPDQQLVESLTSKMMTIDAAGASTGTLKTLRLAQSCNAEYSNY
                     FGAFSSADVAKVLAAFNATITRCNGCYEKDLATHLNLIANTTAVIYYNPSTDPYSTNI
                     SSWNNQLQSTLTSVIGESNYDIGHMFGASGGGGNAGCIGCVCVNGSKGSGITSPADGI
                     PEGDNFDIDYVVHEVGHQLGANHTFSFSNEGTGQQKEIGSGITIMGYAGITSYDVAPH
                     SIDIFHETSIAQIQSNLGGKTCPVTTNITANNVAPVIGAVNNYTIPISTPFALTGSAT
                     DANGDAVTYCWEQNDNSSTTGSGSVASVTKTSGPNWLSFSPTASGTRLFPKLSTILAG
                     LNVTPPLAGGDAGANIEALSSVSRTLNFRLTVRDNHVFSQTSPVSVGQTAFTDVVVTV
                     TNTAGPFAVTAPNTNVTWNGGSTATVTWSVNNTNTGSVNCSAVNILLSTDGGNTFPTV
                     LASSTANDGSEVVNVPSTSGTTNRIKVESVGNIFFDISNTNFTISAPPVCANPAGLAA
                     SAVTQTSATLGWNSDASALSYDVDYKATSSSNWINVATHTTSTSVGLSGLTAGTTYDY
                     RVRINCSAGTGNYVQAQFTTTAATGACPGTSDVSTNGTTSGAATIALNTDVKGLINPK
                     NDNDYYKFVISSGGTITMTLTTLAADYQLALISSGGATLATSTNSGTANETINATVSA
                     DTYYARVYPRNNGQFSASNCYTLRVQTGTASKMVADAMGQSLNNRLAVSPNPARTMAN
                     LIFNADAVGYATLSLMDQTGAVVSRKTFAVIKGDNSRTIDISKLVSGTYFVKLQTGSV
                     VQTAKLVVAK"
     gene            5747..7810
                     /locus_tag="VEV83_17260"
     CDS             5747..7810
                     /locus_tag="VEV83_17260"
                     /inference="COORDINATES: protein motif:HMM:NF012340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C1 family peptidase"
                     /protein_id="HYK46931.1"
                     /translation="MQTETSAPKTTRPLAKQQREKPVKKTAAAKLHRKLDSFPDKVDV
                     RDWIYQPLLAPLPDQIINCDKVPAILNQGQEGACTGFAMAANINFHLAVNGRCKAEDV
                     LKLGASPRMLYELARKYDEWPGEHYEGSSARGTIKGWVAHGVVQREKWKDNVTGLNHF
                     DETMAKQALDIPAGAYYRVMHRNIRDMQAALFEAGILFCTLMVHDGWDDPKNSSKTYH
                     YNSADETKTIKLPIIERSGRANDGHAVAIVGYTREGFIIQNSWGRGWGNKGFAVLPYE
                     DWMLHASDCWVTQLGVPIDVDLWSKGYADTDAGKQRASQIIPLQQIRPYVINIGNNGL
                     LSDSGMYWTTQQDITRMFQNIETVSAAWKKKRVLLYLHGGLNSEKDVARRIIAFKQVF
                     LENEIYPVHIMWETDFWTSLKDEVFDLFTNTDRAGTSWLNKLREGTLEILDRTFEITA
                     SKPGRALWGEMKENARLSAEPGRAMDIVANEALSAFANADSTERNNWELHIVGHSAGS
                     IFTAYAIDALIKIGVPIKSVQFMAPAITIELFNKKLLPHIQKNDCPLPVMYILSDVGE
                     RDDDVGPYGKSLLYLVSNAFEEKRDTPILGMERFINGRNRELDKNFIDATISKLFNTS
                     TNELPNLVIAGAAAAEKNFGASISRSDSHGGFDNDPFTMNSILYRILGRKPKNRLFDV
                     RDLQF"
     gene            complement(7921..8640)
                     /locus_tag="VEV83_17265"
     CDS             complement(7921..8640)
                     /locus_tag="VEV83_17265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46932.1"
                     /translation="MAEDEIAKHTKKIYKIASEKDDTFWHKVKDIVMEIAIIVFAVTI
                     SIWLHNNSEHHHQQDDVKTFLLGLEKDLTADISEMQNDKQSYEMQRAAFNYISRTRLG
                     ETLSPDSLRFYSTWIYNSTALTPNSGRFEGFKSSGKIGFIENDSLQNDIMDLYQENIP
                     SLLASTSNYISHKNVLFEYLQKNLRRETDSTTNLADVMNTEEGHNISRVLSYTTEITG
                     RYDAAINKMKKITAEINREYK"
     gene            complement(8775..9383)
                     /locus_tag="VEV83_17270"
     CDS             complement(8775..9383)
                     /locus_tag="VEV83_17270"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYK46933.1"
                     /translation="MRKHFAAESEKARFETFIDAILAIIVTILVLDFKVPEQTFASDD
                     EIRSFLHRLLPALFSYTISFATIVSLWINHHDLCRKIAYADIRFVLLNFLFILTLSPI
                     PFTTALAGRNHHSSFAVMLVASNYFFMNLAFSFIWTYVTAKKIIPESVSNSKPAKRNA
                     IISIIGGILLLISIPLAYVNTYITFSIFCIVLTLHFAKEFFY"
     gene            9626..>10540
                     /locus_tag="VEV83_17275"
     CDS             9626..>10540
                     /locus_tag="VEV83_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HYK46934.1"
                     /translation="MNQTLFLLVPLMGVIGLLYTFVKFNWVAKQDAGTDHMKTISKYI
                     AEGAMAFLRAEWKILGYFVVIVALLLGVMASSNPNSHWMIAVAFIIGAVCSATAGYIG
                     MRVATKANVRTAHAARTSLSKALNVSFTGGSVMGLGVAGLAVLGLSGLFLILRAIFAP
                     EAPVNSEEMLRTVEVLTGFSLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPED
                     DPRNPATIADNVGDNVGDVAGMGADLFGSYVATVLATIVLGQEVTGPNGTVLADKFGG
                     FSTILLPMLIAGTGIIFSIIGTFFVKVSD"
BASE COUNT         2897 a         2321 c         2412 g         2910 t
ORIGIN      
        1 atcctattca aagaaaatct tcacacgctc atacatcaat ttattttgtg gtagcgtgtt
       61 caatgtggtt ccacccgaaa aacgtcgcag gccaaacaaa cccgcgagat tgcctttatt
      121 tattgcaagc tcaaggtacc cggcagaatt gaaccatgcc agtcgctcac cctgctcaac
      181 agatgcatag ttttcactga tctcctcaat gcctccgtca tttctcgttg gcaaaacgat
      241 cttgaatttt cttcccttcc ggtgttcttc aaattcatct ttggtaagat tgatgaccac
      301 attttcaaac tggtcgatga aaatgatctg gctgtcgatc caatccggcc ctgttgttga
      361 gcggaacgga tatttctctt cgatattgga aatcggtttg ccaatctcat ccacactggc
      421 gcctccatcg attgccctca acatgtcagc aaaagcggcc gtgcaattca atacaccgag
      481 ggcggcctgt ttttttattg agatggcgct cacacaaggc ggcttctcgc ccgctatcat
      541 agtgagtatg ccattatcgg ggcaaactat aatttgatct ttatactttg caagcaacaa
      601 atgctccggc cttttttcga acaggttaat gatgacaaaa tgaaaagtgc cggccgggta
      661 aaaagagaac gcgttggtac acacatacgc agcatgcagg tagttgtttg atataagctg
      721 gtgtgtaata tcaactagcg atacatacgg cgcagcctgc agcagctggc ctttaatcgc
      781 accgataaca taatcgctct ggccaatatc agtggataac gtaacgacgg gcatcgagtg
      841 caaagaatat gcaattagtt ttatttcacc aaaactccgt ccttaaaaaa gaatttatgc
      901 acttttttat cagcgagcga aggcattaaa tgattgagca agattgtttc cctgccctgc
      961 cgtgttaata ttagcgtgcg ttttcgtttt tccacagcgt gcaaaatatg ttcagcacat
     1021 tcttcagcgc tcataaggct gtcttcgtcg agcgtcgttt cgccctgcgg ttctgaattt
     1081 ttatctaatg ctgcattccg aatattcgat tttgtaaatc cgggacatac ccacataata
     1141 tttacgtcag tttcgagcat ctctgttcgt aacgcctcca tccatccctg caacgcaaat
     1201 tttgaagcag aatatcccgt gcggccgggt aacccgcgat aacctgcgat ggaagaaata
     1261 ccaaccatgg tccctttttg tttgagcaaa taaggcaacg catattttgt gcaatagaca
     1321 ggtccccaga aattgatgtc catcacccgt cgaatggttt cgagatcggt ttcgctgaac
     1381 agtgcacgca tcgaaatgcc tgcgttattg atcaggatat caacagtccc gaatacactt
     1441 accgcctgtt cgataatgtt tttgcaatcg gcttcgttgc tcacatcggc cggcagtgcc
     1501 aacaatgttt tcccggcgta tatggtttgc aaccggtaga gcttatcatg gctgcggcca
     1561 caggtcacca cttttgcgcc ctgcgtcatc aaagtattca ccagcgcttt tccaatacca
     1621 tcagtccctc cggtgacaac cactaccttg tctgtgaagt aacccatacg ttctctttac
     1681 ggcaaattta gttagaatag gagcataaaa aagagacgtg cgtgcggcag tgagctgtgt
     1741 tagtaagttg tccggcccgg cctttgattc cgtcttacaa tcctatgcaa catttgacta
     1801 aaattctcgg agcagtattg gcagaaaagt agccgcataa aaaaagaggc tgcaaaaatg
     1861 caacctcttt aaaaatgtat cataatattc ggcgttctcg ccaactttat tttgccacta
     1921 caagtttagc cgtctgcaca acagaacctg tttgcaactt cacaaagtac gtaccactca
     1981 ccagtttact aatgtctatg gtcctcgagt tatctccttt aattactgca aacgttttcc
     2041 ttgacactac tgctcccgtt tgatccatca gggaaagtgt agcataacca accgcatctg
     2101 cattaaatat gagattcgcc attgtgcgcg caggattcgg cgatacagca agcctgttat
     2161 tgagagattg tcccattgca tccgcgacca tctttgaagc agtaccagtt tgcactctca
     2221 gtgtataaca attgcttgcg ctgaactgcc cgttgtttct tggataaacc cttgcatagt
     2281 atgtatcggc tgatacggtt gcattgatcg tctcattagc agtcccgctg ttggtagatg
     2341 tggccaatgt agcaccgcca ctactgatta acgcaagttg ataatctgca gccaatgttg
     2401 ttaacgtcat cgtgatcgtg ccacctgatg aaataacaaa cttgtagtaa tcattatcgt
     2461 tctttggatt gataagacct tttacatcgg tgttcaatgc tattgtcgct gcgccggacg
     2521 tggttccgtt cgtgcttacg tcagacgtac ccggacaagc acctgtagcg gcggtagtcg
     2581 tgaattgtgc ctgtacataa ttacctgtgc ctgcactgca attgatacga accctgtagt
     2641 catacgttgt tcctgcagtt aaccctgaaa gcccaaccga agtagatgtt gtgtgagtag
     2701 ctacattgat ccagttagat gacgatgtgg ctttataatc tacatcataa ctgagcgcgc
     2761 ttgcatccga attccagccg agtgttgcgg acgtttgcgt aactgccgaa gctgctaagc
     2821 ccgcagggtt agcacacacc ggaggagcgg atatcgtgaa attggtgttg gaaatatcaa
     2881 agaaaatgtt tcctactgat tcaactttta tgcgattagt cgtgccggac gttgatggaa
     2941 cattcaccac ttcggatcca tcgttagcgg tcgaagaagc taagactgta gggaaagtat
     3001 ttccaccgtc tgtcgataac aagatgttta ccgcgctgca attcactgac cccgtattag
     3061 tattattgac agaccatgta acggtcgctg tgctgccccc attccaggtg acattcgtgt
     3121 taggggctgt aaccgcgaag ggtccggctg tgttggttac tgtaactacc acatcggtga
     3181 atgcggtctg gccaacagat acaggactgg tttgactgaa cacatgatta tctctcactg
     3241 ttaacctgaa attcagcgtg cgcgaaactg aacttaacgc ttcaatgttt gcgcccgcgt
     3301 ccccaccagc cagtggagga gtcacattta aaccagcaag tatcgttgat aattttggaa
     3361 acagccgtgt tccggatgcc gtcgggctga aagatagcca gttcggtcct gacgttttgg
     3421 taacagatgc tacactgcct gagccggttg ttgatgaatt atcattttgt tcccagcaat
     3481 aagttacggc gtcgccattt gcatccgtcg ctgaacctgt aagcgcgaag ggcgtgctga
     3541 tggggatcgt ataattattt acagcaccaa taacaggcgc cacattattt gccgtgatgt
     3601 ttgtcgtaac aggacaagtc ttccctccta aattggactg gatctgtgcg atcgaagttt
     3661 catgaaatat atcgatggaa tgcggagcaa catcatagct ggtgatccct gcataaccca
     3721 tgatggtgat gccggaacct atttcttttt gttggccggt gccttcattt gaaaacgaga
     3781 aagtatgatt tgcacctaat tgatgtccta cttcatgcac aacataatca atgtcaaaat
     3841 tgtcgccctc cggaataccg tcagcggggg aagtaatacc actgcctttg gatccattta
     3901 cacaaacaca accgatacag cctgcgttgc caccgccgcc ggatgcgccg aacatgtggc
     3961 cgatatcata attactctca ccgataaccg acgttaatgt actttgtaat tggttattcc
     4021 agcttgatat gttagtgctg taaggatccg ttgaaggatt gtaataaatt acggcagtcg
     4081 tattggcgat aagattcaaa tgcgttgcga gatctttttc atagcatccg ttacaacggg
     4141 tgatcgttgc attgaaagcg gcaagaactt tggcaacatc agcggagctg aatgcaccaa
     4201 aatagtttga atattctgcg ttgcatgatt gcgcgagacg cagcgtcttt aaagttcccg
     4261 ttgacgcacc ggctgcatcg atcgtcatca ttttcgacgt caggctttct actagttgtt
     4321 gatcgggtgt actgcatacc catggcaatt ttcctttttc gcggtgcgag ctaaacacag
     4381 aataaaccct gtgatcgctc gaatatggtt caatgaattc atcgtcttta tcggttctga
     4441 aaaccatcgt ttgaatcccc tgaggagaaa tgctgagctt caccgtagca tacttatccg
     4501 taatgcctct ccctgaaaaa gccctgatca gtggaaattg cttttggagg gccggttcaa
     4561 aattcgaaga ttcaacaact tcgaactgtt ccagttttcc gtcagcattc ggcaaagtaa
     4621 tgattgcaga atgtttggtg ctgtggtcta caatggcaaa caattcctgc ctgatggtgg
     4681 tcgcattcag atcaaacaat ttgaattcct tcgggtagct aagtcttgat acagctttcg
     4741 cttttgtaat gttagcgggg ttttcattgt tggcagacca gaacctgtct gtctgcgaaa
     4801 aacccaatac attaattagc gccaacatgg atgttagcag taaaattttt ttcattctca
     4861 ttttgattta agtgatattc tcttttgaca ggagaagttt tggatttgta aatgtagcag
     4921 aattattaaa aaaacaaact tttgttagtg aaagcgccat tccgaaaaat cggaatctca
     4981 aattcagatc ttcaggtttt gggaaacgga ttggtaaact cttcagacat cctttcgccg
     5041 ggttgcgcga tcgtggttgt aataaacact ttggtttatc agaaaaacat attatcttgg
     5101 tatggtcatc acctctccaa tagatctgca tcagcattta atttagaaaa ccgaagaaca
     5161 ctgctaatcc tgaatgagcc atatccgtgc gctacaaaaa cgaagtaaac atcttttaaa
     5221 cttcaaaaca aagcttaacg attatggaac ttacattaaa caggaaaaca agaagcaaca
     5281 tttcaaccat tcgagaactg aggattgacg gcaatttcga gtgttttgta ctagaagacc
     5341 acgattgcat tctaaagcag agcatgtcct tgtcggagct aaataattta aaggtgcacg
     5401 ctcaaacatg cattcctgaa ggccgctacg aaatcgcaat cacgttcacg gaaaaatttg
     5461 gcaaatcatt gccgctgccg ttggatgtat catgttacgc gggcatacgg atccgccccg
     5521 caatgcacca aaggatacgg aaagctgttt attggcgggc caaacgaaaa acaccgatgt
     5581 cgcaggcaaa agcaggcttg cattcaactc actcttttcc aaattaaaag cggcgtagaa
     5641 atcagaaaaa attatgacta ttcagtaagc attcgcaaat aaagaagttg cagacgtatt
     5701 taatcctgca gtaaaaagca tttttaattt ttataaatcg caaatcatgc aaaccgagac
     5761 atcagcgcca aagactacaa ggccgcttgc aaaacaacag agagaaaagc ctgttaagaa
     5821 aactgccgca gcaaaactcc atcgcaaact tgattcgttt cccgataaag tggatgtgag
     5881 agattggata tatcaacctc tcctggcacc attgcctgat caaataatta actgtgataa
     5941 agtgccggca atcttaaacc agggccagga aggggcctgt accgggttcg caatggcagc
     6001 caatataaat tttcatttag cggttaacgg ccgttgcaaa gctgaggatg tgctcaagtt
     6061 aggcgcgagt ccaagaatgc tctacgagct cgcaagaaag tacgacgaat ggccgggtga
     6121 acattatgaa ggttcgtcag cgcgcggtac cataaaaggt tgggttgcgc acggcgtagt
     6181 gcaacgagag aaatggaaag ataacgttac gggacttaac cattttgatg aaacaatggc
     6241 gaagcaagcg ctggatattc cagcaggcgc atattatcgc gtgatgcacc gtaatatacg
     6301 cgacatgcag gcggcgttgt ttgaggccgg aattttattt tgtacattaa tggtgcatga
     6361 tggctgggac gatccaaaaa attcttcaaa aacttaccat tataattccg ctgatgagac
     6421 gaagacgata aagctgccga taatcgaaag aagcggccgc gcaaatgatg gacatgcggt
     6481 tgcgatcgtt ggatacacca gggaaggatt catcattcaa aactcatggg gtcgcggatg
     6541 gggaaataaa ggcttcgccg ttttgccata cgaagattgg atgctccatg cttcagattg
     6601 ctgggtaacc cagttaggcg ttccgattga cgttgattta tggagcaaag gatacgccga
     6661 tacggatgcg gggaaacaaa gggcttcgca aataatacct cttcaacaaa tcaggccgta
     6721 tgtgataaac atcggaaaca acggtttgct ttcggattcc ggtatgtatt ggacgacaca
     6781 gcaagacata acaaggatgt tccaaaatat cgaaacagtc tcagcagcat ggaaaaaaaa
     6841 gcgtgtgttg ctctacttgc atgggggatt aaattccgaa aaagatgttg cccgccggat
     6901 cattgctttc aaacaggtgt tcctcgaaaa tgaaatatat cccgtgcata ttatgtggga
     6961 aacagatttc tggacgtctc taaaagatga ggttttcgac ttatttacaa acacagaccg
     7021 ggccggcaca agctggctca ataaactgag ggaaggcacg ctcgaaattc ttgaccgcac
     7081 gtttgaaata accgcatcaa aaccaggaag agccctgtgg ggcgaaatga aagaaaatgc
     7141 acgcctgtcc gctgagccgg gccgcgcaat ggatatagtg gcaaatgaag cgctaagtgc
     7201 attcgccaat gctgatagca ccgagcgcaa caactgggag ctgcatatag tcggtcatag
     7261 tgccggttcg attttcacag catacgcgat cgacgctctc ataaaaattg gggtgccgat
     7321 aaaatcggtt cagtttatgg cgccagcgat aacaatcgaa ttgttcaata aaaaacttct
     7381 tccgcacatt caaaaaaatg actgtccatt gcccgtcatg tacattttga gcgatgtagg
     7441 ggaaagagat gatgatgtag gcccatatgg taaatcgctt ttgtatttag tgagcaatgc
     7501 atttgaagaa aaaagagata cgcccatcct cggtatggaa cgatttataa atggacgtaa
     7561 cagagagctg gataaaaact ttatcgatgc cacgatatcg aagttgttta acacgtcaac
     7621 gaatgaatta ccgaaccttg taattgccgg tgctgcggcg gctgaaaaga atttcggcgc
     7681 ctcaataagc agaagtgact cgcatggtgg ttttgacaac gatccgttca ccatgaactc
     7741 cattctgtat aggattctcg gtcgaaaacc taagaacaga ttgttcgatg tgcgtgacct
     7801 tcaattttga ttcggtgtaa ttgtgattag tgaccagcgc tgtagcaaat ttgaattgac
     7861 gcaatcggag ccagctttgt tgttcgcttg ttgaaaaatt tgccagcgca aatatggatc
     7921 ctatttgtat tcgcggttga tctcagccgt gatctttttc atcttattta tggcggcgtc
     7981 atacctgccg gtaatttcag tagtataact gagtaccctg ctaatgttat gcccttcctc
     8041 tgtattcatc acgtcggcaa gatttgtagt ggagtctgtc tcgcggcgaa ggtttttttg
     8101 caggtattca aatagcacat ttttatggct gatgtagttg ctcgttgacg ctaacaacga
     8161 cggtatgttt tcctggtaaa gatccatgat gtcgttttgc aggctgtcgt tttcgataaa
     8221 tccgattttt ccggaagatt taaacccttc aaacctgcca ctgttgggcg tgagtgccgt
     8281 tgaattgtat atccaggtgg agtaaaagcg caggctatcc gggcttagtg tctcgccaag
     8341 ccgcgtgcga ctaatataat taaaggcagc cctttgcatt tcatacgatt gtttgtcgtt
     8401 ctgcatttcg gagatatccg ccgtaaggtc tttctccagg ccaagcaaga atgtctttac
     8461 atcgtcttgc tggtggtggt gctcactatt gttatggagc cagatagaga tggtcactgc
     8521 aaagacaata atcgcgatct ccatgacaat atcttttact ttatgccaga aagtatcgtc
     8581 tttttccgaa gcgatcttgt aaattttttt agtatgttta gctatttcgt cttccgccat
     8641 ctaagtacgt tgtacgcaaa ataagcatta ttggggaaga tgaacatcgg cccttcagaa
     8701 tgtcaacact gccgtcatat ttagcggcgt cacatcattc aacatgcttt ggccaaacgc
     8761 actctctact aatttcaata aaaaaattcc ttcgcaaaat gcagtgtcag cactatacaa
     8821 aaaattgaaa acgtgatgta ggtattcaca taggcaagcg gaatgcttat gagcaacagt
     8881 attcctccga ttatcgaaat gatggcattt ctcttcgcag gtttactatt cgatacggat
     8941 tcgggaatga tctttttcgc agtcacatat gtccatataa atgaaaacgc caggttcata
     9001 aaaaagtaat tacttgccac aagcatgaca gcgaaagaac tgtgatgatt ccgtcccgcc
     9061 agggcggtcg taaacgggat cggcgataag gtaagaatga aaagaaaatt gagcaataca
     9121 aaccggatat cggcgtatgc gatcttacga cacaggtcgt gatgattgat ccaaaggctt
     9181 acgatggttg caaaggagat cgtatagctg aacaaagcgg gcaagagtcg atgtagaaac
     9241 gatcttattt catcgtcgga agcaaaagtt tgctcaggca ctttgaaatc aagtacgagg
     9301 atagttacga tgatagccag tatggcatcg ataaatgtct cgaaacgtgc cttttcagat
     9361 tcggccgcaa aatgtttccg catcgcagaa aatgttttct ccagctttct ataaaaccga
     9421 tcctgctgca aaggtaaatg cactctgcgg ctccggtttt acgagtttgg ggcaaaaaac
     9481 tgctcacagg tgacaataac aaaaacgcgt agcaggcatc gccttatttt agaaaaatca
     9541 ctttgtacac acgcggggtg ggcatatgct tacattagcc catttcccct atttttgcgc
     9601 tccatcaaaa atcacatcag cagttatgaa tcaaacctta ttcttactgg taccgcttat
     9661 gggcgtgatt ggactattgt acacatttgt aaaattcaat tgggttgcaa agcaggatgc
     9721 cggaaccgat cacatgaaaa ccatcagcaa gtacattgct gaaggtgcca tggcattctt
     9781 acgggcagaa tggaaaatcc tcgggtattt cgtggtgatt gttgccttat tgcttggtgt
     9841 aatggcaagc agtaatccca attctcactg gatgatcgct gttgcattta ttatcggtgc
     9901 agtatgcagt gctactgccg gctatattgg aatgagagtc gctaccaaag cgaatgttcg
     9961 tactgcgcac gctgcaagga ccagtttgtc aaaggcgttg aacgtttctt ttacgggtgg
    10021 ttctgtaatg gggcttggtg tagcaggact ggcagtgtta ggcttaagtg gtttgttcct
    10081 catactgaga gcaatttttg ctccggaagc gccggttaat tcagaagaaa tgttgcgcac
    10141 agtagaagtt ctcacgggct tttctttggg cgcagaatca atcgcattgt ttgcgcgtgt
    10201 aggtggtggt atctacacaa aggctgcaga tgtgggcgct gacctcgtag gcaaagtaga
    10261 ggccggtatt cctgaagatg acccacgcaa cccggcgact attgcggaca atgttggtga
    10321 caacgtagga gatgttgcag gcatgggcgc cgatctcttt ggttcttatg tcgcgaccgt
    10381 tcttgccaca atcgtgctag gccaggaagt taccggacct aatggaacgg tgcttgccga
    10441 caaattcgga ggcttctcca ccattttatt accgatgctt attgcgggaa ctggtattat
    10501 tttctcgatc atcggaactt ttttcgtaaa agtgagcgac
//
LOCUS       DASQJI010000637         8225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1311149,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000637 DASQJI010000000
VERSION     DASQJI010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8225
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311149"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VEV83_17280"
     CDS             complement(<1..1179)
                     /locus_tag="VEV83_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HYK46935.1"
                     /translation="MPSYLASPVQAGVGAARQISASLLTFAPLMKHLSALHKYFWKYR
                     VRFLAGILFVVISNYFAVLAPEVTGYVIGKVQQYLSQKPTITKENYSGSVQLFINWLQ
                     RFDFNRIVLICSIVILLLALMRGLLMFFMRQTLIVMSRHIEYDLKNSIYNHYQELDAG
                     FFKTHSTGDMMNRIAEDVSRVRMYTGPAIMYAANLVALITLCLVNMLRKDMSLTLTVI
                     APLPILAITIYIVNNVIHKKSERVQALLSDLTTNAQESYSGIRVIKSFVQEKAMLGFF
                     SKNSEEYRKNAVGLAKVEAIYFPSMTLLVGLSTLLTIVIGSGMALQNPDKVGIIVEFV
                     LYINMLMFPVSAIGSVASMVQRAAASQKRINEFLHTKPVIIDPVKAGQKHAPLQGDII
                     F"
     gene            1382..2188
                     /locus_tag="VEV83_17285"
     CDS             1382..2188
                     /locus_tag="VEV83_17285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46936.1"
                     /translation="MPKPIYGLLPVSVHGPLPTRDAVVINAWGVGKPAYITNIVYDTL
                     FSLNINHRGVGTEAVPYTPDTLRYKDTLNDIVSSIQPAAFYTIENEEQHFTGDIYHSE
                     GITAYCNELKATAHVFNGDKIFTNGGYTSPAEYWYYAKTHDEDFKAKVIPNVIIQGVQ
                     NEIDSAEYEMNIVRSMPANFVNNIHLYIGYSYQVEPLIRMCNYIKQFTGHDILSNEAG
                     IYQDNPDLIADLMRLAKGAGMRYMIFYSGDGSGGAYPITAEQIMIEAAKN"
     gene            complement(2211..2591)
                     /locus_tag="VEV83_17290"
     CDS             complement(2211..2591)
                     /locus_tag="VEV83_17290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HYK46937.1"
                     /translation="MEQEKVRLDKYLWSIRIFKTRAQASDACEKGRVRLNGSAVKASK
                     QVHIADEYSVKTEFKNWVIKVTGVISHRVQYSEAVKYYIDLTPAEEKEKLEFQAASFH
                     TGKRLSKIGRPTKKQRRDLGDFIE"
     gene            complement(2660..3073)
                     /locus_tag="VEV83_17295"
     CDS             complement(2660..3073)
                     /locus_tag="VEV83_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46938.1"
                     /translation="MKRTLFLLAAVLISVTALHAQKVEVVTNDKPGWHKIGETHVDFK
                     TDKDVVKVLGADKFKALQIKAVDAPVHIEDMQVVYENGEPEDIPVRYDFKQGTESKPI
                     DLKGYERKIKEINFVYRTVPNWKGDRAHIEIYGLK"
     gene            complement(3246..3656)
                     /locus_tag="VEV83_17300"
     CDS             complement(3246..3656)
                     /locus_tag="VEV83_17300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46939.1"
                     /translation="MKKTLFILAALCVTLSSVHAQTTATTGDKSGWKKIGELHVDFKA
                     DKDVMKVAGEEHYKALKIKAVDAGVHIESMQVVYANGTPDDVPIRYDFKRGEESRQID
                     LAGKDRNIKEISFVYRSLSNSRDEKAHIQIFGLQ"
     gene            complement(3739..5637)
                     /gene="nagB"
                     /locus_tag="VEV83_17305"
     CDS             complement(3739..5637)
                     /gene="nagB"
                     /locus_tag="VEV83_17305"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004342 - glucosamine-6-phosphate
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0006046 - N-acetylglucosamine catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HYK46940.1"
                     /translation="MVDSFEKIQVEIFKNSDEGSRSAACEIAKLISEKKDAGENCVLG
                     LATGSTPITLYAELVRLHKEENLSFKNVITFNLDEYYPIEKDAVQSYYNFMHRHLFDH
                     VDILPENVHIPNGSLPKEEIKAHCLEYEQMIDDVGGIDLQILGIGNNGHIGFNEPGSS
                     RYSRTRLTNLDNNTRNANAREFDDISKVPRLAITMGISTIMKAKKILLMAWGQKASIV
                     AKAVEGHVSEQIPASILQQHNNCTFILDENAASELTRFKSPWLAGEVEWSPKMIKRAV
                     VNMALKLDKPVLSLTNDDYRENGLAELLVDKGEAYEINLQVYYLLRDSITGWPGGKPN
                     AVIPAHPERSEPYPKRCLIFSPHPDDDIISMGGTFMRLHDQGHEVHVAYQTSGNIAVT
                     DEFVTRFIDFAVGFEEMFQMDNAKSNEILDSATDFLRSKKSNQRDTHEIRAIKGLIRR
                     CEARATCRYVGLSDEQIHFQNLPFYETGTIDKKPMSQDDVDITIELLRKVKPHQIYCA
                     GDFADPHGTHLICFNIVLSALQQCKAAGEDWVNACWLWLYKGAWQEWNIEDIEMAIPM
                     SPEQVMKKRYGIFIHQSQKDMVPFQGSDNREFWQRAEERNANTADLYAKLGLTKYAAM
                     EAFVRWHY"
     gene            complement(5707..7344)
                     /locus_tag="VEV83_17310"
     CDS             complement(5707..7344)
                     /locus_tag="VEV83_17310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HYK46941.1"
                     /translation="MKKIFVAIAAVSFVSCIAQSPLNVIPEPAKAEIKQGTFTLSPST
                     TILLSASNLENSVNFFNSYLKKYYGFELKTSKQSSDHKNVIELNYDRLDNSLPGGYEM
                     NVDKDKVYIGGNDEQGVFYGIQTLIQLLPPEKSNGLAIQQCNILDSPRFAYRGLHLDC
                     GRHFFSVDFIKQYIDFIALHKMNTFHWHLTEDQGWRIEIKKYPKLTQVGGCRNGTITG
                     HAPGTGNDSVVYCGYYTQEQVKDVVKYAAERYITVIPEIELPGHSSAAIAAYPWLSCF
                     PGEPTQVKPKVVWAGEIKGKEVQQTWGVFPDVFCPSDSTFKFLEDVLDEVIALFPSKY
                     IHIGGDECPKDFWKRSDFCQQLMKEKGLKDEHELQSYFINTIEKYVNSKGRSIIGWDE
                     ILEGGVAPNATVMSWRGEKGGIAAAQQHHTVIMTPTTYVYFDYSQTKQEDSLTIGGYL
                     PVETIYNYEPLPSSLNADEQKYIIGAQANVWSEYMSNPAKVEYMIFPRLTALSEVLWS
                     PKESKNWEDFKNRLPQQYKRYDLWQVKYNVKGIDKGE"
     gene            complement(7410..>8225)
                     /locus_tag="VEV83_17315"
     CDS             complement(7410..>8225)
                     /locus_tag="VEV83_17315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYK46942.1"
                     /translation="FNYFLKGKGNIDSIAEANIFITGANKWRSFSAWPPANKEDEPLY
                     LQPDGKLGWSESEGTSDAKYSEYTSDPNKPVPYEEDVHFNRSRTYMDADQRFAERRPD
                     VLTFKTDTLTKDITVTGSVIADLLTTISTTDADFVVKLIDVFPEYMGYNDVDIYAVED
                     APNIYPMGGYEMLVRAEIFRGRYRKSYEDPEAFTPGKVEEVKFNLPDIAHTFKTGHRI
                     MVQIQSSWFPLADRNPQQFIDIYHCDEKDFIKSDIRIWHDAQHASRLILPVLK"
BASE COUNT         2088 a         1921 c         1744 g         2472 t
ORIGIN      
        1 aaaaatgata tcaccctgca gcggcgcgtg tttttgtccg gccttcaccg ggtcaattat
       61 tacaggcttc gtgtgaagaa actcgttgat ccgtttctgt gacgcggctg ctctctgcac
      121 catacttgcc acactgccta tcgcacttac cgggaacatc agcatgttta tgtataacac
      181 aaattcgacg atgatgccca ccttgtccgg attttgcaag gccattccgc tgccgatcac
      241 gatcgtgagc agcgtgctaa gtcccacgag tagcgtcata cttggaaaat agatcgcttc
      301 cactttggca aggccaacgg cgttcttccg gtattcttcg ctgttcttgc tgaaaaaacc
      361 gagcattgct ttttcctgca caaaggattt tatcaccctt attccggaat atgattcctg
      421 agcgtttgtg gtgaggtccg aaagcaatgc ctgcacccgt tcactttttt tatgaataac
      481 attattgacg atgtagatgg ttatggcaag aatgggtaac ggcgcaataa cagtgagcgt
      541 tagtgacatg tccttacgga gcatattcac aagacagagc gttatcagtg cgacgagatt
      601 tgcagcatac atgatagcgg ggccggtgta cattctcacc cggctcacat cttcagcgat
      661 gcggttcatc atatcgcctg tactgtgcgt tttaaagaaa cccgcgtcga gctcctggta
      721 atgattatag attgaattct taagatcgta ttcaatgtgc ctgctcatta cgatgagtgt
      781 ttgacgcatg aagaacatga gtaaaccgcg catgagcgcc aacaataaaa tgacgatgct
      841 gcagataagc acgatcctgt taaaatcaaa gcgctgcagc cagtttatga aaagttgcac
      901 agaaccgctg tagttttctt ttgttatcgt gggtttttgc gaaaggtatt gctgcacttt
      961 cccgatcaca taaccggtca cttcaggcgc gaggacggcg aaatagttgg aaatgacgac
     1021 aaacaaaata cctgcgagaa aacgtacccg gtatttccaa aaatatttat gtaaggccga
     1081 aaggtgtttc attaaaggcg caaaggtaag gagcgacgca gagatttgac gagctgcgcc
     1141 gacaccagcc tgaaccggcg atgctaaata cgaaggcatt atttttgccg gcagatcact
     1201 accaatgcct gctctttgag aaaaaaatta aaacatggca agagcagcgt atcggtttcg
     1261 tgataaggtt ttaacctcgt ctttcagggt ggtttcccga atgataaaag gcttgagtga
     1321 aatatgtatt ttcttatgct tgatttcaac gacctgttgc acaaaatcct ctgtcgattc
     1381 tgtgcccaaa ccgatttatg gtttattacc tgttagcgtc catggtccat tgcctaccag
     1441 ggatgcggtc gtgatcaatg cctggggcgt ggggaagccg gcatacataa ccaatatcgt
     1501 ttacgatacg ttgttctcac tgaacatcaa tcatcgcggc gtaggcacgg aggccgttcc
     1561 atatacaccc gacactttga gatataaaga cacactaaac gacattgtct cttcaataca
     1621 accagccgca ttctacacca tcgaaaatga ggagcaacat tttaccgggg acatttatca
     1681 tagcgaaggg atcaccgcat actgcaacga attaaaggca accgcgcatg tatttaacgg
     1741 tgacaaaata ttcaccaacg gcggttatac gtcaccggcg gagtattggt attatgcaaa
     1801 aacacatgac gaggatttta aggccaaggt gattcccaac gtaattatcc agggcgtgca
     1861 gaacgagatc gacagtgccg aatatgaaat gaatatcgtt cgaagtatgc ctgcaaattt
     1921 tgtaaataac atccacctct atatcggtta tagctaccag gttgagcctc taataagaat
     1981 gtgcaactat atcaaacagt ttacgggcca cgacatcttg tcaaacgaag cgggcattta
     2041 tcaagataac cccgatctaa tagccgacct gatgaggttg gccaaaggtg caggtatgcg
     2101 ttatatgatc ttctacagcg gcgatggatc gggaggcgca tatcccatca cagcggagca
     2161 gataatgata gaggcggcaa aaaattaata aaggcgattt atcattcagg ctattcaata
     2221 aaatcgccaa gatcgcgtct ttgttttttt gtgggacggc cgattttgct taatcgcttg
     2281 ccagtgtgaa aacttgcggc ctggaactcc aatttttctt tttcctcagc cggtgtaagg
     2341 tcgatgtaat atttcactgc ttctgaatac tgcacacgat gggaaatgac tcctgtcact
     2401 tttatcaccc aatttttaaa ttccgttttt acggaatatt cgtcagcaat atgtacctgc
     2461 ttcgaagctt taaccgcaga accattcaat cgtaccctgc ccttctcgca agcgtcagaa
     2521 gcctgcgccc gtgttttaaa gatgcggata gaccacaggt atttatccag gcgaaccttt
     2581 tcctgctcca ttgtccaaaa ataaaaaaac ctatgaggtc gcgccgaccc cacaggttaa
     2641 attaattagt tcttaccgct tatttcaaac cgtatatttc tatgtgcgct ctgtctccct
     2701 tccagtttgg taccgtgcga tatacaaaat ttatttcctt aattttcctt tcatatcctt
     2761 tcaggtcaat aggcttgctt tcagttccct gcttaaaatc gtaacggacc ggtatatctt
     2821 ccggttcccc gttttcgtaa acaacttgca tgtcttcaat atgtaccggt gcatcgacgg
     2881 cttttatttg gagcgcttta aacttatcgg cgcctaatac tttaacaaca tctttgtctg
     2941 ttttaaagtc aacgtgagtt tcgcctatct tatgccaccc gggtttgtca ttggtgacaa
     3001 cttcgacttt ttgcgcgtgc agggcggtta ccgagatcaa tacggcggcc agaagaaata
     3061 gtgttcgttt catggtttgt aattttccca tgaaaaaaca aattccattc cacaatcgcg
     3121 gagcaatcgt taattagttg cggcgaacta acgatccgga tctttttgta cggggcgttc
     3181 tatgcgattg acccagcaat gaaaacttaa gaagaatcct acctgttctc aaaaatcgct
     3241 gttcgtcatt gaagaccaaa aatttgtatg tgagcctttt cgtcgcgcga attggacagg
     3301 ctgcggtaaa cgaaactgat ttcctttata ttacggtctt ttccggccag atcaatttgc
     3361 ctgctttctt caccccgttt gaagtcatac ctgataggga cgtcatctgg tgtgccgtta
     3421 gcgtacacca cctgcatact ttcgatgtgt acgccggcgt caaccgcctt tatcttgaga
     3481 gctttgtaat gttcctcgcc tgctaccttc attacgtctt tatcagcctt gaaatcgaca
     3541 tggagttcgc cgatcttctt ccatcccgat ttgtcgccag tggtcgctgt agtttgggcg
     3601 tgtacgctgc tcaaggtgac acataaagca gccaggataa ataatgtttt tttcatattg
     3661 tataatttgg ataggagcga caaaattcat tccacacagt cggtatttta cggttaactg
     3721 gtaacccatt tggcttgatc aatagtgcca tctcacgaag gcctccatcg cggcgtactt
     3781 cgtcagaccg agctttgcat aaagatcagc ggtgttcgcg ttacgctctt cggcacgttg
     3841 ccaaaattcc cggttatcac ttccctggaa cggaaccata tccttctggc tttgatgaat
     3901 aaatatgccg taacgttttt tcattacctg ttcaggactc atgggaattg ccatctcaat
     3961 gtcttcaatg ttccactcct gccatgcgcc tttataaagc catagccagc acgcgttcac
     4021 ccagtcttcg ccagccgcct tacactgttg caaagccgat agcacgatat tgaagcaaat
     4081 gagatgtgtt ccatgcgggt ctgcaaaatc accggcgcaa tagatctggt gtggcttcac
     4141 ctttctcaat aattcgatcg tgatatcaac gtcatcctgc gacatgggct ttttatctat
     4201 ggtgcctgtc tcataaaaag gaagattttg aaaatggatc tgctcatcac ttaaacccac
     4261 gtagcggcat gtcgcccttg cctcgcaccg gcgtattaat cctttaatgg ccctgatctc
     4321 gtgtgtatct ctttgatttg atttttttga ccgaagaaaa tctgttgcac tatcgagtat
     4381 ttcgttgctt tttgcgttat ccatctggaa catttcttcg aagccgactg cgaaatcaat
     4441 aaagcgcgta acaaattcat cggtgaccgc aatattgccg cttgtttgat aggccacatg
     4501 cacttcatgt ccctggtcgt gcaaacgcat gaatgttccg cccatgctga tgatgtcgtc
     4561 atcgggatgt ggagaaaata tcaggcagcg cttggggtac ggttcacttc gttcaggatg
     4621 cgcaggtatc acagcgtttg gcttgccccc cggccagccg gtaatactgt cgcgtagcag
     4681 gtaatatacc tggaggttta tttcataagc ttcaccttta tcaaccagca attcggccaa
     4741 gccattttcg cgataatcat cgttcgttaa actcaaaaca ggtttatcca gtttaagggc
     4801 catgttaacc accgcacgct ttatcatttt tggcgaccac tcaacttcgc cggcgagcca
     4861 cgggcttttg aaacgggtta attctgatgc agcgttttcg tctaaaataa aagtacagtt
     4921 gttgtgctgc tgtaaaatac ttgccgggat ctgctcgctc acgtggcctt ccactgcttt
     4981 tgcaacgatg ctcgcttttt gtccccacgc cataagcagt attttcttcg ctttcatgat
     5041 cgtactaatg cccatcgtta tcgcaagccg cggcactttt gatatatcgt caaattctct
     5101 tgcgttcgcg ttgcgcgtgt tattgtccag attcgtgagt ctcgttcttg aataacggct
     5161 cgagcccggt tcattaaaac ctatgtggcc attatttccg atgccgagga tctggaggtc
     5221 aatgcctccg acgtcgtcga tcatttgctc atattcgagg caatgcgctt ttatttcttc
     5281 ttttggtaaa gagccattcg ggatgtgaac gttttccgga aggatgtcga cgtgatcgaa
     5341 caaatgccgg tgcataaaat tgtagtaact ctgtacggca tctttttcaa tcgggtaata
     5401 ttcgtcaagg ttaaaagtta tcacattttt aaagcttaaa ttttcttctt tatgcagtcg
     5461 cacgagttct gcatacaaag tgataggcgt cgatcctgtt gcgagaccaa gtacgcagtt
     5521 ctcacctgca tccttttttt cagaaataag ttttgcgatc tcacacgctg cggatcttga
     5581 accttcatct gagttcttaa agatctcaac ctgaattttt tcaaacgaat ccaccatggc
     5641 tattgaaaat tgaatattga aatattgaaa tatttacatc ttaactctta attctttctt
     5701 ctaattctac tctcctttat cgatcccctt gacattatat tttacctgcc aaagatcgta
     5761 tcgtttatac tgttgtggca ggcgattttt gaaatcctcc caattcttac tttctttcgg
     5821 actccacaac acttcactta atgcagttaa gcgcggaaag atcatatact ccactttcgc
     5881 cgggttgctc atgtactcgc tccatacatt tgcctgcgcg ccgatgatgt acttttgttc
     5941 gtctgcattt aatgaagaag gaagcggctc ataattataa attgtttcca caggcaaata
     6001 tccgccgatc gttaaactgt cttcctgttt tgtttgcgag tagtcaaagt aaacataagt
     6061 tgtgggcgtc atgataacgg tatgatgttg ctgcgcggca gcaatgccgc ccttttctcc
     6121 gcgccagctc atcacggttg cgttcggtgc gacaccgcct tccagtatct catcccagcc
     6181 gataatactg cggcctttgc tgttcacata tttttctatc gtgttgataa aatagctctg
     6241 aagctcgtgc tcatccttca aacctttttc tttcatgagc tgctgacaga aatcggaacg
     6301 tttccaaaaa tcttttgggc attcatcacc accaatgtga atatattttg aaggaaataa
     6361 agcgatcacc tcgtccagca catcctcaag aaatttaaat gtgctgtcgc tcgggcaaaa
     6421 tacatccgga aatacacccc aggtttgttg cacttctttt ccttttatct caccggccca
     6481 aacaaccttc ggttttacct gcgttggttc gccaggaaaa caacttaacc acgggtaggc
     6541 tgcaattgcc gcggaactat gaccaggcaa ttcgatttcg gggataacgg tgatatacct
     6601 ttcggcagca tacttcacga cgtctttaac ttgttcctgt gtatagtaac cgcaataaac
     6661 aacgctgtcg ttaccagtcc ctggtgcatg gcccgtaatt gttccatttc tgcaaccacc
     6721 aacctgggtg agttttggat actttttgat ctcaatgcgc cagccctggt cttcggttag
     6781 atgccagtga aatgtgttca ttttatgcag cgcaataaaa tcaatgtatt gtttgataaa
     6841 atcgacagag aaaaaatgtc ggccgcaatc gagatgcagg ccgcgatatg caaagcgcgg
     6901 tgaatcgaga atgttgcatt gttgtatcgc caggccgttt gatttttccg gtggcagcaa
     6961 ctgtatcaac gtttgaatgc cgtagaaaac accctgttca tcattaccgc cgatataaac
     7021 tttgtcttta tcaacattca tttcataacc accgggaaga gaattgtcga gccggtcgta
     7081 attgagttca atgacatttt tatgatcact gctttgtttg gatgtcttca gttcaaaacc
     7141 ataatatttt ttcagatagc tgttaaaaaa gttgacactg ttctcgaggt tggaagcaga
     7201 taaaagaatt gtagtcgatg gactgagcgt gaacgtcccc tgttttattt ctgctttcgc
     7261 tggctcgggg atcacgttga gtggtgattg tgcgatacat gacacgaatg ataccgcagc
     7321 aatagcgaca aaaattttct tcatagtggc tgttttttat tttcgataac gacgatgtgt
     7381 tacgataact tttgaattac atactgaacc tatttcaata caggcaatat tagcctggat
     7441 gcatgttgag catcgtgcca gatccttata tcgcttttga taaaatcttt ttcatcgcag
     7501 tgatagatat caataaactg ctgcggattt ctgtctgcaa gcggaaacca gctactctgt
     7561 atctggacca tgatgcgatg gccggtttta aaagtatggg cgatatcggg caggttgaat
     7621 ttcacttctt caactttacc cggcgtaaag gcctcaggat cttcatagct tttccggtaa
     7681 cggccgcgaa aaatttcagc acgtactaac atttcataac cgcccatcgg gtatatgttt
     7741 ggagcatctt ctaccgcgta aatatccacg tcgttatatc ccatatattc aggaaatacg
     7801 tcaattagtt ttaccacaaa atctgcgtct gtcgttgaga tggttgtcaa caggtctgcg
     7861 atcacgcttc ccgttaccgt tatgtcttta gttaatgtat ctgttttaaa tgttagtaca
     7921 tccggccgac gctcggcaaa acgctggtct gcatccatgt aagtcctcga ccggttgaaa
     7981 tgtacgtctt cttcataggg cacgggttta tttgggtcac ttgtatactc gctatacttt
     8041 gcgtcacttg ttccttcgga ttcactccac cctagttttc catcaggctg cagataaagt
     8101 ggttcatctt ctttatttgc gggaggccat gccgaaaacg atcgccattt gtttgctccc
     8161 gtgataaaaa tattcgcctc ggcaatgctg tcaatattcc ctttgccttt tagaaaataa
     8221 ttgaa
//
LOCUS       DASQJI010000638        18978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2848433,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000638 DASQJI010000000
VERSION     DASQJI010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 18978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18978
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2848433"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VEV83_17320"
     CDS             complement(<1..422)
                     /locus_tag="VEV83_17320"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HYK46943.1"
                     /translation="MRKLASLLSLFAVTLFAASAQNENKVRIIMIGAHPDDCDQDGGG
                     TAILLAKMGYAVKFVSVTNGDAGHQTMGGKELAKRRYDEAQEAGKRFGVTYDVLDNHD
                     GKLEPSLEVRMQVIRKIREWNADVVIAPRPNDYHPDHR"
     gene            complement(538..1290)
                     /locus_tag="VEV83_17325"
     CDS             complement(538..1290)
                     /locus_tag="VEV83_17325"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HYK46944.1"
                     /translation="MVNANSVDNGGIRKLPVDSTLVAWYPFTNGELGDKSGHHNKIIF
                     CSATPTVAKNGKDSDAYYFDGTSSYMQVKNRPSLNPSQAITLAALIKPMGFYQGQCHG
                     NRILNKEYSDATDGRYLLGYDDQKFYNYTGCDQPVKENRENFYGTYGNGQAAASGATD
                     TDYVRPGKWYNIVYTYGNGVSNLYINNKLVMSAAVSTSFKPNTYDLLIGKHLNPPFPY
                     YFTGVIDEIRIYNRALSSSEVTGLSSLMGKDN"
     gene            complement(1577..8815)
                     /gene="sprA"
                     /locus_tag="VEV83_17330"
     CDS             complement(1577..8815)
                     /gene="sprA"
                     /locus_tag="VEV83_17330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein SprA"
                     /protein_id="HYK46945.1"
                     /translation="MRNFFAHLSILLVLFLLGVSDISFAQVSDSLHYPLQDRRGDRFT
                     WDYSNPFDLTDTAIIRQNVEYDPVTNQYYITEKVGDVLYRKPTYLTFDEMYRYQSQKQ
                     ETDYFNERAQTLLDLNRKISRPPPRVYDKLFDRIFGVGPTGLKVDIKPQGTIDLSMGY
                     QGQVIQNPTLPESARKNGGLDFNMNANININASIGDKLKLPISYNTLANFDYENQLKL
                     DYKGMDDEILKSVEAGNITFQTKSTLMTSPQSLFGVKTQLQFGKLFITTAIANQRSQQ
                     QSIALEGGGLNQRISKKLDDYDENRHFLLAQYFKNNYNYAMSNLPIVNSQVQISRMEV
                     WVTNRTGTTINTRSIVGFMDLGESSPYNPNIHSITTDLLPQNGSNDLYANLLADPNFR
                     DPAAINTLLLARGLTPVNDFEKTFARKLDSTEYFYNPQVGFLSLNVQLQPDEVLAVAY
                     QYTYNGRVYQVGEFSQDVTVDSTQGVQKMLFLKLLKATSQRVSLPIWDLMMKNVYSID
                     VTSFQPQDFKLNVLYQEPSGGLKRYLPESDPAVAGNPLIRILRADRLNNQNDPQPDGL
                     YDYVDGFTVLSQQGKVIFPVLQPFGDDLETLAFQGQPDTTKQKYVYHQLYDSIKAIAQ
                     TYANLNHYLLEGTVKGSSNTDISLGAFNIPQGSVTVSAGGQILQENVDYIIDYNLGTL
                     KIINQAIINSGVPVNVQFENSASFGIQQRSFFGLRLDYLVNKNLSLGGTIERLKERPF
                     FTKVNYGEDPIRNTMYGVDFSYQNQLPSVTRFINKLPFYNSDAPSTINAYGEFAALKP
                     GHPPQIGKGSEGLIYIDDFEGATSSVDLRFPFVAWALASTPQGNGLFPEATATNSLSY
                     NSNRAKLAWYNIEPTLQDKSSPNNPLKNNLAELSDPRVRQVFTSELFPQRTTNITDVV
                     TSTFDMAYYPEDRGPYNFNDSAGSVDANGKFKDPKSKWGGIMRNIDQTDFETGNIEYI
                     EFWMQDPFIKDPGSTGGKLYIDLGNISEDILKDGRRFYENGLPTPNIPAVTENSVWGR
                     TPVNPIQITQAFSNDPADRPYQDVGFDGLDDDSEKVRRSAYLNDIATNFGAASKFYQE
                     ASADPSNDNYIWYRDGAYDAAGTGILGRYKDYNNPQGNSPISTGNSPFSPAATLYPDN
                     EDLNRDNTLNETEEYYEYEIDLHPGMTVGLTKYITDQKVVNPKLADGSSVPENWYLFR
                     VPIEDFTAKIGQIPDFKSIRFIRMYMTGFEDSAVLRFATLDLVRNQWRTFTYKVDTVG
                     GSGGYTQLDPNSPTDINVLAVNIEENSSRQPIPYRTPPGIERVQELSNNGVNLLQNEQ
                     AMSLQINNLEKHDSRAVFKTLNLDLRQYGEMSMFIHAESGLKQVPALQDGQVAAVIRI
                     GQDFLDNYYEIKIPLKITAFSSTATPEQIWPDSNNLDFSLNDLVQLKIRRNSQGYPIT
                     GFYTEKVGERTYAVKGNPNLGEVQGMLIAVENETENTISTEVWVNELRLSRIDEKGGY
                     AALGRLDMQLADLGTLTVSTNTYSYGFGTIEQQINQRAKENMFQFDAALNIDAGKLLP
                     QKAGITIPMYASINKTVLTPEYDPYDLDILYKDKLSAAGDKKDSVRKAAVDETTITTL
                     NFTNVRFGQTGAKPHFWSISNFDFSYSYTQFKETNPLILLNDIRKYRGGFGYTFNAPS
                     KFKEPFKTSIKNKSVWLTPIRDLNINPIPSLVSFRTDINRQYGIYVPRLINTYDTKID
                     EVDTTYDKYFTFDRYYNLRWDLTRSFNLDFAATAFARVDEPAGQINTKEKKDSLWQNF
                     WHAGRNTLYQQHATLSYNIPLQKLPITDWITARYNYTTTYNWIGASLLATSLGNTIEN
                     SQQNNLTGEFDFTRLYAKSKFLAAVSVNAEQQDTGEVNVNDTIQPPKPRADVIKDLKG
                     FDKRRALQKWRQQKRDYRKAQRQGKKAGGMSTGAKVAGELITMVKHASLSYSENYNSR
                     VPGVTTGTGYLGQNQKTNQPGLDYIFGRQPDTNWLNQKAAEGMITKDTLFNLLYNQDY
                     QQLITFSAQLEPIREFNVDVNLQKTFTKNYSELFKNLFDSTHTGFSHLSPLAGGGFSV
                     SYISFQTLFKKSNPNEISPTFQEFQNNRIIIAKRLAYSNPYWNQTYQGDGFPTGYGRY
                     QQDVLLPAFIAAYTGKDPNTIDLISQSNPKVSSNPFSGIHALPNWRVSYTGLSKIPSL
                     ANVFNNITITHGYNSTLSYNSFTSQLLFYDPLHLGQPAFIDPVSGNYIPFFLIPNLTI
                     QEQFAPLIGFDITTNNQTSLRFEYAKSRQLSLSLYDYQLSEVRSSSITFGGSYRKHGV
                     NMPFKLPFVKADPDQTDMSISLDLAVRDDVQSNSRLDQPNAYSTGGQKTISIQPALDY
                     IINNRIDFRFYFDQQRVIPYISTSAPIINTRAGIELRISIAPSQQPPQ"
     gene            complement(8855..9439)
                     /gene="ruvA"
                     /locus_tag="VEV83_17335"
     CDS             complement(8855..9439)
                     /gene="ruvA"
                     /locus_tag="VEV83_17335"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HYK46946.1"
                     /translation="MIAFVSGRFVVKLPSQVVVDVNGIGYDLQISLNTYSSISNNDNG
                     KLYTYLHITENAHTLYGFFDLAEKELFLQLISVSGVGAATARMMLSGLKPDEIVKAVM
                     QNNTRQLESVKGIGRKTAERIVLELKDKLGRLQTNQHESSYSHNTVETDALNALVSLG
                     IQRNTAETALKKVILSNGDNQSIENIIKLALKNL"
     gene            9578..10576
                     /locus_tag="VEV83_17340"
     CDS             9578..10576
                     /locus_tag="VEV83_17340"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HYK46947.1"
                     /translation="MSKITAAITAVGGYVPDYRLTNKELEKIVDTNDEWIRTRTGITE
                     RRILKGAGKGSSDLAIPAVMQILERQGLDPLEIDCIVVGTVTPDMVFPSTANIIADKI
                     GAKNAWGFDLSAACSGFLFSLGTGVSLIESGRYKKVLVVGADKMSAITDYTDRNTCIL
                     FGDGAGAVLLEPSTDDTGIRDMILRTDGSGREYLYMKAGGSLEPPSVETVTAKKHFVY
                     QEGKAVFKFAVTGMADVSEEIMKRNNLKSEDVAWLVPHQANLRIIDATANRMGLSKDK
                     VMINISRYGNTTSGTIPLCLWEWEKQLKKGDNIVLAAFGGGFTWGAIWVKWSYDTP"
     gene            complement(10974..12533)
                     /locus_tag="VEV83_17345"
     CDS             complement(10974..12533)
                     /locus_tag="VEV83_17345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46948.1"
                     /translation="MKSSLALLALLLASAAIPGTSKAQGGYTLAACIKDDMGNVWNVT
                     VTHKGNFYTGVGNVDVGAGYLWDATITYDESEHTTTFKAVNPKADACASGWVDYFTYK
                     GRANAKKLGQDAAYNGHGSFKSYCSGTVVNVGDWTATDCASAVKISNPGNPAKAANSE
                     KSWDLGVCIRDDAGYVWTFTAYYNDHGTWFATGSVDLGDGSPVWDAKGKYQPATHETE
                     FEATNLNPDGCTIHTDAFRYEGTAKAKNNGGVVTYNGSGTWTSYCGGSEYATGTWSAT
                     DCDHKGGAINPIGAGKVSNSQKVWDLGVCIHDDAGYVWTFTAYNNDHGTWFATGTVDL
                     GDGSPVWDAKGKYQPATHETEFEATNPNSDGCTIHTDGFRYEGTAKAKNNGGVVTYNG
                     SGTWTSYCGGSEYATGTWSATDCDNKGGIANPNGAGKASGASFVKVSPNPIIGQANVS
                     YAIARAGQVNITVYNSMQQAVKVLVNGYRNAGSYSTVWDTRSGNLNSGIYRVVAVVNG
                     RTYTTTVQVVK"
     gene            13026..14255
                     /locus_tag="VEV83_17350"
     CDS             13026..14255
                     /locus_tag="VEV83_17350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK46949.1"
                     /translation="MGKQKFNYSGISSLALHGAGEDFAESSHLPPIYATSTFTFSDAH
                     QGMQRFSGAEQGYIYSRWGNPTFTVAEDIIAALEVFQLKDANGDELKVKAMLHASGMA
                     AINNLFQSNLKAGDAILSHFSLYGGVHELMHKVLGQNNIETIIADLRDLNIAEDVIRK
                     NKNIRLVHLETPANPTIQCVDIEAITRLAKQHNILVSVDNTFATPYLQQPFKYGVDFV
                     AHSTTKFLNGHGTAIGGVLLGKDIEFMKTKATKWQRLLGGSSNPFDAFLLITGMKTLE
                     LRMDRHCHNAMAVANFLQEHPSVEKVNYNGLASHPDFAVAKKQMRHPGAMLSFELKGG
                     LEAGKKFIDNLQMCTRAVSLGTADTLISHPASMSHYGVSREERLQFGITDGLIRMSVG
                     IENTEDILTDLDNSLQG"
     gene            14252..15190
                     /locus_tag="VEV83_17355"
     CDS             14252..15190
                     /locus_tag="VEV83_17355"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK46950.1"
                     /translation="MSKKIAIVGAGISGLACAYLLSRKNYSITIFAKAFSPDTTSNRA
                     AAFWFPYHIRNDRRGIEWCRTSYRVFRQLMHDPRTGISMKQLIKVVREDVVEDEPVWI
                     EFMPEGSIQMVPKKELQPGVAKAYDVQVPLIETQIFLPYLKEYLLTKNVAFEQADVKD
                     LQSLQSSHDVVINCAGLGARDLCDDKNVVPVRGQVALIETLSDFPIYLDNEKPLYIVP
                     RKDAMIVGGTYEENIFDEFTEPETIEKILCNAYEVFPQLKKQKIIGSWAGLRPYRPVV
                     RVEREENIIHNYGHGGSGFTLSFGCAEEVVKLVEEA"
     gene            15446..15946
                     /locus_tag="VEV83_17360"
     CDS             15446..15946
                     /locus_tag="VEV83_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK46951.1"
                     /translation="MGITIRRAAKEDCKRLLELVKELAEYERAPHEVTVTLQHFEDSG
                     FGDNPVWWGFVAVSSNESFTLNESAILGFALYYVRYSTWKGQRMYLEDILVTEKARGQ
                     GIGKLLFDRLIEEAREKKFNGIVWQVLEWNEPAINFYKKYNAKLDAEWINCSIELGQG
                     PAIEHL"
     gene            16043..17989
                     /locus_tag="VEV83_17365"
     CDS             16043..17989
                     /locus_tag="VEV83_17365"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK46952.1"
                     /translation="MRKPFISVFYFLIFSCTNAQQLPAFGKVSQEELLMKECAFETSA
                     PAMYLLNEETISFKEDAYDSKTIYERRARIKIFDKHGYEYATVVIPDARSRGIKVTDL
                     DAYVYNLAPDGKMKVEKVDRDQIFKEKQNGKKNAGSLRFTFPNLQPGSVIEYRYTRVK
                     KNTGVLEPWFFQSLIPVQISVCKINVPSGVELKTRIVATQLADEDSSITSSDENSRYR
                     FIQIVLHKVPSFVVEPYMSSINDNLERVEFFMYRSIVFFLANAPEERWKLMGSMLKDF
                     AFFGRQFDMPVQGTQALIDSIKKLSTNTEKINAVYEVVKDRVKWNTDQVFLAEDIQDA
                     WNTRSGSSAEINILILNLLRNVGVSCKPLLISTRENGRIEMAFPTLGQFDGVDVLITD
                     SINNFILDGTQKYQSYRIPPLNILNRDAFVIDSVCHWVSIEDNTPLMNSSTYVKATLD
                     SSGVLQGSASIVMKDYAKAEELKDREKDEAEREEQQKDFLQIDNGGIKIDSVSDNDSA
                     DISQPLEVKMNFHYSLSNNDNFYFLNPYLFSMFRKNPFTTTERHSDIDFGCMQRFLTY
                     IIIDIPGNFSVEEIPKSVLLRTADTSISFRKDVSFENNRVGIRYDFELNNPLFTKENY
                     PGVKAFFDKIYGIIGEQILLKKKE"
     gene            18143..>18978
                     /locus_tag="VEV83_17370"
     CDS             18143..>18978
                     /locus_tag="VEV83_17370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4954 family protein"
                     /protein_id="HYK46953.1"
                     /translation="MARNDITKTPIEKLGYNFIKQEYLPKGKDEYYLRDLQNRSGIIY
                     RNLTAYEIEALVKNRNTSDDWNKIFVSDAFNPELVKNCKFFGLVRIGKLEPWFLEFSD
                     MKYAVGLYNSIIISTDIGDNVVIDHVNYLSHYIIGNEVILVNVNELATTDHSKFGNGI
                     LKQGEDESVRIWMEICNENGGRSVIPFSGMLPGDAYMWSKFRDDELLLEKFKELTEKE
                     FKNERGFYGKVGDRTVIKNSAIIKDVWIGSDAYIKGANKLKNLTIHSSQDAKTQIGEG
                     CE"
BASE COUNT         5051 a         4110 c         4320 g         5497 t
ORIGIN      
        1 taacggtgat cagggtgata atcattcggg cgcggtgcta tcacgacatc ggcattccat
       61 tcccggatct tcctgatgac ctgcattctt acttcaagag atggttctaa tttcccatcg
      121 tggttatcca aaacatcata tgttacacca aatcgtttcc cggcttcctg cgcctcatca
      181 tatcttcttt ttgcgagttc ttttccaccc atcgtttggt ggcctgcatc accattcgtg
      241 acagaaacaa acttcaccgc atagcccatc ttcgctaaaa gaattgcagt gccgccgcca
      301 tcctggtcgc aatcgtccgg atgcgcgccg atcattatta ttcgcacttt gttttcattt
      361 tgtgccgaag cggcaaataa ggtgacggca aaaagggaaa gtaaagaggc aagctttcgc
      421 atagtaaaag ttttatcagc atgaagataa aagtttactg tttaaaaaat tcgaagtaat
      481 ttgttgggta gtgacgcatt ttgaaaaaaa gcgccattgt atatccttaa aggaagatta
      541 attgtctttc cccatcaaac tgcttaaacc ggttacctcg cttgatgata atgccctgtt
      601 atagattcgt atttcatcaa tgactccggt gaaatagtaa gggaaggggg gattaaggtg
      661 cttacctatt aacaaatcgt acgtgttggg cttaaatgaa gtgcttacgg cagctgacat
      721 aaccagctta ttatttatat acaagttcga cacgccgttg ccataggtat atactatgtt
      781 ataccacttt ccaggtctaa catagtccgt atctgttgca ccgcttgctg ctgcttgtcc
      841 atttccatac gttccataaa agttttcgcg attttctttc actggttggt cgcatccggt
      901 ataattataa aatttttgat cgtcataacc taatagatag cgtccgtcgg ttgcatcact
      961 atattcttta tttaagattc tgttcccgtg acattgaccc tgatagaaac ccattggttt
     1021 tattagtgcc gccaaagtaa tagcttgact tggatttagg gatggtctgt tttttacctg
     1081 catataactt gaagtgccat cgaaatagta tgcatcgcta tctttcccat tcttagcaac
     1141 agttggcgtt gctgagcaaa aaatgatttt attgtgatga ccgcttttat ctcccaactc
     1201 cccgtttgtg aaaggatacc atgctaccaa agtgctgtct acgggcagct tacgaatgcc
     1261 gccattatca acggaattcg cattcaccat agtaccgctt tgatcttttt ggcaagacgt
     1321 gagttgatat gaaacaaaga gtacgcagaa gatgattgta aggtttgtgg ttttcatact
     1381 acgtatttta atatcaaaag tacctctttt gaacctggca ttttcgttta attacacatt
     1441 ctcgttcttc ttataactgc ctctgctttt gggtgctgta taaggcgctc attcgtgcaa
     1501 tatcttctat tgtcataggc tttttcatta atccagcttg cataaaattt caaactgcgt
     1561 cactaccatt tttctgttac tgcggtggct gttgggatgg tgctattgag atccgcagct
     1621 cgatacccgc tctcgtgttt atgatcggcg ccgacgtgga tatgtatggt atcacacgct
     1681 gttgatcgaa atagaagcgg aagtcgatcc ggttattgat gatataatcc aatgcaggtt
     1741 gtatgctgat cgttttttga ccgccggtac tgtaagcatt cggctgatcg agcctgctgt
     1801 tgctttgtac atcatcacgc acggcaaggt cgagacttat gctcatatcg gtctggtcag
     1861 ggtctgcttt cacaaacgga agcttgaaag gcatattcac tccatgcttg cgatagctgc
     1921 ctccaaaagt tattgaactg cttctaactt cgcttaactg gtaatcatac aaactaagac
     1981 tgagttgcct gctcttcgcg tattcaaaac gcagcgatgt ttgattattc gttgtgatat
     2041 caaaaccaat aagcggtgcg aactgttcct ggatagtgag gtttgggatc aggaagaacg
     2101 gaatgtagtt gcccgatacc ggatcgatga atgcaggctg tcctaaatgc aaaggatcat
     2161 agaataataa ctggctcgtg aaactgttgt agctgagcgt gctgttgtag ccatgtgtta
     2221 tggtgatgtt gttaaacaca ttcgcaaggc ttgggatctt tgagagtccc gtatagctca
     2281 ctctccagtt cggtaatgca tgaatgccgc tgaaaggatt tgaacttact ttaggatttg
     2341 attgactaat gagatcaatt gtgttggggt ccttacctgt gtacgctgcg atgaacgcag
     2401 gtaacaacac gtcctgttga taacggccgt aacccgtagg gaatccatca ccctggtatg
     2461 tttgattcca ataaggatta gagtatgcca accgtttcgc tataataata cggttatttt
     2521 gaaattcctg gaatgtaggt gatatctcat tcgggttact ttttttgaac agtgtttgaa
     2581 aactgatata ggaaacgctg aaaccaccgc ccgctaacgg actcaaatga ctgaagccag
     2641 tgtgtgttga atcaaaaaga ttcttgaata attcagaata atttttcgtg aatgtttttt
     2701 gaagattcac gtcaacatta aattctctta tcggctccag ttgcgcgctg aatgttatga
     2761 gctgctgata gtcctggttg tacaaaagat tgaacaacgt atccttggtt atcatgcctt
     2821 ctgccgcttt ttggttcaac cagtttgtgt ctggttgtct tccgaaaata taatcgaggc
     2881 ccggttggtt cgtcttttgg ttttgtccga ggtaaccggt gccggtggtt acacccggaa
     2941 cgcggctgtt ataattttcg ctgtagctga gagaagcatg cttcaccata gtaattagct
     3001 cgcccgcgac tttggcgccg gtgctcatgc cacctgcttt ttttccctgg cgttgcgctt
     3061 ttcgataatc tcttttctgc tgacgccatt tttgcaacgc ccggcgtttg tcaaaacctt
     3121 ttagatcttt gatcacatcc gctcttggtt taggaggttg aatcgtatca ttgacattta
     3181 cttcgccggt atcctgctgt tccgcattta cgctcacagc agcaaggaat ttagatttgg
     3241 catataatct tgtaaagtca aattcgcctg ttagattatt ctgttgtgaa ttttcaatcg
     3301 tattgccaag gctcgttgcg agtaagctag cgccgatcca gttataagtt gttgtataat
     3361 tatagcgcgc ggtgatccag tcggtaatcg gtaacttttg aagcggaata ttataactta
     3421 acgtagcatg ttgctggtat aatgtatttc ttccggcatg ccagaagttt tgccaaagcg
     3481 aatccttctt ctccttcgta tttatttgtc ccgcaggttc atctactctc gcgaaagctg
     3541 tggctgcaaa atcgaggttg aaacttcgcg tcaggtccca ccgtaaattg tagtaacgat
     3601 cgaaagtgaa atacttatcg taagtagtat cgacttcatc gatcttggta tcatacgtgt
     3661 tgataagtcg cggaacatag attccgtatt gacggttaat gtcggtcctg aaacttacca
     3721 gcgacggaat tggattaatg ttcaaatctc ttatcggcgt aagccataca cttttgttct
     3781 ttatactggt tttaaacggt tctttaaatt tcgaaggcgc attgaatgta taaccaaatc
     3841 cgccgcgata ttttcttata tcatttaata atatcagcgg atttgtttct ttgaattgtg
     3901 tatatgaata actgaaatcg aaattactga tgctccaaaa atgcggtttg gcgcctgttt
     3961 gcccgaaacg cacgttggta aaatttaaag ttgtgatggt agtttcatcc acggcggctt
     4021 ttcttactga atcttttttg tcgcccgctg cactcagttt gtctttgtat aaaatgtcca
     4081 ggtcataagg atcatattcc ggtgtgagaa cagttttgtt gatgctcgca tacatgggta
     4141 tggtaatacc ggctttctgt ggtaataact tgccggcatc gatgttcaat gcagcatcga
     4201 actggaacat gttttctttt gcccgttggt ttatttgctg ttcgatagtt ccaaaaccat
     4261 aactatatgt gttcgtcgac acggttaatg tgccaagatc tgcaagttgc atgtcgagtc
     4321 gccctaacgc tgcataacca cctttctcat cgattcggga aagccgcaat tcgtttaccc
     4381 atacttcggt gctgatcgtg ttctcggttt cattttccac cgcgatcaac atgccctgta
     4441 cttcaccgag attcggattt cccttgacag cgtacgtgcg ctcccccacc ttttccgtat
     4501 agaaacccgt gatcggatat ccttgcgaat tcctgcggat cttcaactgc accaggtcat
     4561 tcaaagaaaa atcgagattg tttgaatcag gccatatctg ttcgggtgta gcggtgctgc
     4621 taaaagcggt tattttaagc gggatcttta tttcgtaata attgtcaagg aaatcttgtc
     4681 caatacggat cactgcggca acctgcccgt cctgcaacgc tggcacttgc ttcaaccccg
     4741 attctgcatg gatgaacatc gacatttcac cgtactgccg cagatcaagg ttcaacgttt
     4801 taaacaccgc tctcgagtca tgcttctcga ggttgtttat ctgaaggctc attgcctgtt
     4861 cattttgcag aaggttcaca ccattgttac ttagttcctg cacgcgttca atgcccggag
     4921 gagttcggta aggtatgggc tgacggctgg agttctcttc aatattcact gccagtacat
     4981 tgatgtcagt gggcgaattg ggatccaatt gcgtgtatcc tccagaacct ccaacagtgt
     5041 caactttata cgtgaatgtt ctccattgat ttctcacaag gtctaatgtg gcaaaacgca
     5101 acacggcaga atcttcaaag ccggtcatat acatccggat aaatcggata gacttgaagt
     5161 cggggatctg gccgatcttg gctgtaaaat cttcgatcgg tacgcggaac aagtaccagt
     5221 tttcaggaac actacttcca tcggcgagct ttggattcac gactttttga tcagtgatat
     5281 attttgtcag gcctacggtc atgcccggat gcagatcgat ctcgtattcg taatactcct
     5341 cagtttcatt aagcgtatta tcgcggttga ggtcttcgtt atccgggtac agcgtagcgg
     5401 caggagagaa gggcgagttg ccggtagata tcggtgagtt tccttgtgga ttgttgtaat
     5461 ctttgtatct accgagaatg cctgttccgg ctgcgtcata agccccatcg cggtaccaga
     5521 tgtaattatc atttgatggg tctgctgacg cttcctggta gaacttagat gcggctccaa
     5581 aatttgttgc gatatcattc aaatacgcgc tgcgtcttac tttttcggaa tcatcatcca
     5641 gtccgtcaaa accaacatcc tggtaaggac ggtcggccgg atcattactg aaagcctgtg
     5701 tgatctgaat cggattcaca ggtgtgcggc cccaaacgga attttcggta acagcaggta
     5761 tgttcggagt aggtaaacca ttttcgtaaa aacgcctccc gtctttcaaa atgtcttcgc
     5821 tgatattacc caggtcgata taaagttttc cgccggtgct gccgggatct tttatgaaag
     5881 gatcctgcat ccagaattca atgtattcga tgttccccgt ttcaaaatcc gtttgatcga
     5941 tgttgcgcat gatcccgccc catttcgatt ttgggtcttt gaactttcca ttcgcatcaa
     6001 cgctgccagc actgtcgtta aaattataag gcccgcgatc ttccgggtaa taggccatat
     6061 cgaaggttga tgtaacaacg tcggtgatgt tcgtcgtgcg ttgtggaaac aattcgcttg
     6121 tgaacacttg ccttaccctt ggatcgctca attcggccag gttatttttt agcggattat
     6181 tcgggctgga tttatcctgc aatgttggtt cgatattata ccatgcaagc tttgcgcggt
     6241 tactgttgta agaaagacta ttggtggcag ttgcttcggg gaaaaggcca ttgccctgcg
     6301 gcgttgatgc caatgcccac gccacaaacg ggaatcgcag atctacgcta ctggtcgcgc
     6361 cttcaaaatc atcaatataa attaatcctt cggaaccctt tcctatctgc ggcggatgcc
     6421 cgggcttcag cgctgcaaat tcaccgtaag cattgatcgt gctcggtgca tcagaattat
     6481 aaaatggaag tttgttgata aatcttgtta cacttggcag ttgattttga taactgaagt
     6541 cgacgccata catggtattc cgtatcgggt cttcgccgta attaaccttt gtaaagaacg
     6601 gcctctcttt caaacgttcg atcgtaccac ctaacgacaa atttttattt accaggtaat
     6661 ccaatcgtaa accaaagaag cttcgctgtt gtatgccgaa gcttgcacta ttctcaaact
     6721 gcacatttac gggcacgccg gaattaatga tcgcctggtt aatgatctta agcgtgccga
     6781 gattgtaatc gatgatatag tcgacattct cctgtagtat ctggccgcct gcggaaacgg
     6841 tcacagaccc ttgcggaata ttgaatgcgc ccaaagaaat gtcggtattc gaacttcctt
     6901 ttaccgttcc ctctaacaga tagtgattca ggttcgcata agtttgagcg atggctttga
     6961 tggaatcata aagctggtga taaacatatt tttgtttcgt ggtatccggt tgtccctgga
     7021 aagcgagagt ttcgaggtcg tccccaaaag gttgcaagac cgggaatatc accttaccct
     7081 gttgcgatag cacagtgaac ccgtcaacgt aatcatagag accatcaggc tgtggatcat
     7141 tttgattgtt taatctatcc gctcgtaaaa ttctgatcaa tggatttccg gcaaccgcag
     7201 gatcgctttc aggcaggtat cgtttcaaac ctccgctggg ttcctggtaa aggacattta
     7261 atttaaaatc ctgcggctga aagctcgtta catctattga gtaaacattc ttcatcatca
     7321 agtcccagat gggaaggctt actctttgcg acgtggcctt taataatttc aggaagagca
     7381 ttttttggac gccttgcgta gaatcaaccg tcacatcctg cgaaaattca cccacctggt
     7441 aaacacgtcc gttgtacgtg tattgatacg ctacagccaa aacttcgtcc ggctgcaact
     7501 gaacattcaa agaaagaaag ccaacctgcg gattatagaa atattctgtg gagtcgagtt
     7561 tgcgtgcaaa tgttttttca aaatcattta ctggcgtgag gccgcgtgcc agcaacaaag
     7621 tatttatggc ggccgggtcc ctgaaatttg ggtcagccag taagttagca tagagatcgt
     7681 ttgagccgtt ttgaggcagc agatcggtgg tgatggaatg aatgtttgga ttgtacggac
     7741 tcgattctcc gaggtccatg aagccgacaa tgctgcgcgt atttatcgtg gtccctgttc
     7801 ggttcgtgac ccaaacctcc atgcgcgata tctgaacctg gctatttaca ataggcaggt
     7861 tgctcattgc ataattgtag ttgtttttga aatactgagc caggagaaaa tgccggttct
     7921 catcataatc atcaagcttc ttacttattc tctggttcaa gccgccgcct tctaacgcga
     7981 tcgattgctg ctgagaacgc tggttagcta tggcggtagt aataaaaagt tttccaaact
     8041 gaagctgtgt tttcactcca aacaaactct gcgggcttgt catgagtgtg cttttggttt
     8101 ggaaagtgat gttgccggcc tctacagatt tcagtatctc atcatccatg cctttgtaat
     8161 cgagcttaag ctggttctca taatcgaaat tggccagcgt gttgtaactg ataggaagtt
     8221 tcagcttatc accaatgctc gcattgatat tgatgttggc attcatattg aaatccaacc
     8281 cgccattctt ccgggcactt tcaggcagcg ttggattttg tatcacttgt ccctggtagc
     8341 ccatcgagag atctattgtg ccttgcggtt tgatgtccac cttcaaacct gtgggtccga
     8401 caccaaaaat gcggtcgaat agtttatcat acacccgcgg tggtggccgg gatatcttgc
     8461 gattaaggtc aagcaatgtt tgggcacgtt cgttgaaata atcggtttcc tgcttttggg
     8521 attgatagcg atacatttca tcgaaggtga ggtaagtggg tttgcggtat agaacatcgc
     8581 caaccttctc cgtaatgtaa tattgatttg taaccgggtc gtattcgacg ttctgcctga
     8641 tgatcgcagt gtcagtgagg tcgaaagggt tgctgtaatc ccaggtaaaa cgatcgcccc
     8701 gtctatcctg caagggataa tgcaggctat cgctcacctg cgcgaatgaa atatcactca
     8761 cgcccagtaa gaacagcact aggagaatag aaaggtgcgc aaaaaagttt ctcaaggtaa
     8821 tcttggcctg gttaggtaga atttcccgat aagcttacag attttttaat gcgagtttaa
     8881 taatgttctc aatcgactgg ttgtcgccat tggataaaat tacctttttc aaagctgttt
     8941 cggcagtatt tctttgtatg ccaagtgata ccagagcgtt cagggcgtct gtttctaccg
     9001 tattatgtga atacgaactt tcatgctgat tggtttgcag tcgccccaat ttatctttca
     9061 gttcgagtac gattcgttcc gccgtttttc ggcctattcc ctttacactc tcgagctgtc
     9121 ttgtattgtt ctgcatcaca gcttttacga tttcatccgg ctttaagccg ctgagcatca
     9181 ttctcgccgt ggctgcgcca acgcctgaaa cactgatcaa ctggagaaaa agctcttttt
     9241 cggccagatc aaaaaaacca tataaggtgt gtgcattttc tgttatgtgc agataagtgt
     9301 agagcttgcc gttatcatta ttgctgatcg acgaataggt gttcaagctt atctgcaggt
     9361 catacccaat accattgaca tctacaacaa cctgggaggg taattttaca acgaatcttc
     9421 cgcttacaaa tgcaatcata ctgcggtttc aaaagtatgg ctttcattca aaacttttac
     9481 tttttcgaaa aatgtatttt acaggtacaa tcgctgctga gcgatcgcca aatacattcc
     9541 tgtatttttt gatacttttg cgacctaact tttgaacatg agcaagataa ccgctgctat
     9601 tactgctgtt ggaggttatg taccggacta ccgtttaacg aacaaagagc ttgaaaaaat
     9661 cgtcgatacg aatgacgaat ggatacggac acgtactggc atcacggagc gcaggatctt
     9721 aaaaggggcc ggcaaaggaa gcagcgacct ggccattccg gcggttatgc aaattctcga
     9781 aagacaaggc ctggatccgc tggaaattga ctgtattgta gtcggcacgg ttacgccgga
     9841 tatggtcttt ccttccaccg ctaacattat tgcagataaa ataggagcga agaatgcctg
     9901 gggcttcgac cttagtgccg catgcagtgg gttcctattt tctctcggga ccggcgtttc
     9961 gttgattgaa agcggccgtt ataaaaaggt tctcgtggta ggggctgata aaatgagtgc
    10021 gatcacagat tataccgacc gcaacacttg catactattt ggcgatggcg ccggagctgt
    10081 cctcctcgaa ccttcaacgg atgacacggg tatccgcgat atgatccttc gaacagatgg
    10141 aagcggccgc gaatatttat atatgaaagc cggcgggtca ttagaaccgc cttcggttga
    10201 aaccgtcacc gcgaaaaaac atttcgtata ccaggaagga aaagcggtgt tcaaattcgc
    10261 tgtcaccggt atggctgatg taagcgaaga gatcatgaaa cgcaataacc ttaagtctga
    10321 ggacgtagcc tggctggtgc ctcaccaggc aaatctcagg atcattgatg cgactgcaaa
    10381 ccgcatgggc ttgtcaaaag ataaagtgat gatcaatatc agccgctatg gaaacacaac
    10441 gtcaggcacc atcccgcttt gtttgtggga atgggaaaag caactaaaga agggcgacaa
    10501 catcgttctt gctgcctttg gtggcggatt tacctggggc gcgatctggg tgaaatggtc
    10561 gtacgatacg ccttaaaaaa gagggcggct cgttgcagcc ctcacttata acaccaattt
    10621 ctaaaaggct aactgatcac ctgcactgta gttgagtgga tttgccatcg atcaccgcaa
    10681 cagcacggtc aatacctgaa tttatagtcg aagttttggt atcctatact gccgaataat
    10741 ttccattctt gaaatcgttc accaaaactt ctacggcctg ctatagattg tgacgttcac
    10801 tgtgcctgat cttccaactg cacaggaaat attagcctgg ccatgaaaat acaaacattt
    10861 aaagattatg aatatctcgt gttgaatgta caccacctca ccacacgtgt gatataaaaa
    10921 taaaaagagg ccgcgtgccg cagcctcttc gtgaagttag tttaagttga ttcttacttt
    10981 accacctgta cagttgttgt gtatgttctt ccgtttacaa ctgcaacaac tctgtagatg
    11041 cctgaattca aattaccgct ccttgtgtcc catacggttg aatagctacc agcattcctg
    11101 tatccattta cgagaacttt tacagcctgc tgcatagaat tgtaaaccgt gatattcacc
    11161 tggcccgccc gggcaatcgc atatgaaaca ttcgcctgac cgatgatcgg atttggagac
    11221 acttttacaa atgaagcacc tgaagcttta cccgcgccat taggattagc tatgccgccc
    11281 ttattgtcgc agtctgttgc actccatgta ccggttgcat attcactgcc tccgcaatag
    11341 cttgtccacg taccggagcc gttataagtt acaactcctc cgttattctt tgctttcgca
    11401 gttccttcat atctgaaacc gtcggtatga attgtacatc cgtcggaatt agggttggtg
    11461 gcctcaaatt ctgtttcatg tgttgcaggc tgatacttgc ctttcgcatc ccaaacagga
    11521 gagccgtcgc caagatcaac ggtaccagtg gcaaaccagg ttccatgatc gttgttatac
    11581 gcagtgaacg tccatacata accggcatcg tcatggatgc acacgccgag atcccatact
    11641 ttctgagagt ttgagacttt accggcgcct ataggattaa tagcaccgcc tttatggtcg
    11701 cagtctgttg cactccaggt accggttgca tattcactgc ctccgcagta gcttgtccac
    11761 gtaccggagc cattataagt cacaactcct ccgttattct ttgctttcgc tgttccttcg
    11821 tatctgaacg cgtccgtatg aattgtgcat ccgtcgggat taagattggt ggcttcaaat
    11881 tctgtttcat gcgttgcagg ctgatacttg cctttggcat cccaaacagg agagccgtcg
    11941 ccaagatcaa cgctacccgt ggcaaaccag gttccgtgat cgttgtaata tgcggtgaag
    12001 gtccatacat aaccggcgtc gtcacggata caaacgccca ggtcccatga tttctcagag
    12061 tttgcagctt ttgccggatt gcccgggttg ctgattttaa ccgcgcttgc acaatctgtt
    12121 gccgtccagt cgcccacatt tacgactgta cctgaacaat aacttttgaa agaaccatga
    12181 ccattgtaag ctgcatcctg ccctaatttt tttgcattcg ccctgccttt gtaggtaaaa
    12241 taatctaccc agcccgaagc gcaagcatca gccttcggat taacagcttt gaatgtagtt
    12301 gtgtgttctg attcatcata tgtgattgtg gcatcccata aatagccggc gcctacgtca
    12361 acgttgccga cccccgtata aaaattaccc ttgtgtgtta cagtgacgtt ccaaacgttg
    12421 cccatgtcat ccttaatgca cgcggcgaga gtataaccac cctgggcttt tgaagtgcct
    12481 ggtattgcgg ctgaagccag taacagcgca agtaatgcta aacttgattt catagtaaaa
    12541 atttttttgc gttaataaaa gtttgttgtt aaataaaaaa gttgatctgt tttttggtct
    12601 tgtattgaag ctttgtttta agtcaaattg cgttcgcttg aacgaattac cggtggccca
    12661 cggacaagtg tttcgttttg gcttattgga atttaagagg cgccggaaat caaaacagga
    12721 tacgtttgat acggcgggaa ctattagttg tttatgtgca aaagttcaaa cgattttcaa
    12781 accgatgcct tcgttgatgt tactgacagg tagtggcaac cgctcacgga ttaaattttc
    12841 gctattgcca tcttaggtta aacatgctct tctacaggtg caagtacggt tacaacattg
    12901 ttcttaatct ccgtcattta acggaatttt ttgcatgggg gataaatcat gtttcatcaa
    12961 cgaatgcaac cttggacgtc gttctaaata ttaagacagt atttttgcgc gcttaagttt
    13021 ttttgatggg aaaacagaaa ttcaattact cagggatcag ctcccttgcg ctgcatggag
    13081 ctggcgaaga ttttgcagaa tcatcgcatt tgccgcctat atatgcgacg tctacattca
    13141 ctttcagtga cgcgcaccag ggcatgcagc gattttcggg tgccgaacaa gggtatatat
    13201 acagcaggtg gggcaaccca acttttacag tagccgaaga tatcatagcg gcacttgaag
    13261 tttttcaatt gaaagatgca aatggcgacg agcttaaagt aaaggctatg ctgcacgcta
    13321 gtggcatggc cgccatcaat aatttgtttc aaagcaattt gaaagccggc gatgcaattc
    13381 tctcgcattt ctcattgtac ggtggtgtac atgagctcat gcacaaagta cttggtcaaa
    13441 ataatattga aacgatcatt gctgacctcc gcgatttgaa tatcgctgaa gatgtgatca
    13501 gaaaaaataa aaatataagg ctggtgcatc ttgaaacgcc cgcaaatccg accattcaat
    13561 gcgtggatat agaagcgatc acccggttag caaagcagca taatatactc gtttctgtag
    13621 acaacacctt tgcgactcct tacctgcagc agcctttcaa atatggagtt gatttcgttg
    13681 cgcattcaac gacgaaattt ctgaacggcc atggcactgc cattggcggt gtgctgttgg
    13741 gaaaggatat tgaattcatg aagacaaaag ccaccaagtg gcaacggcta cttggcggca
    13801 gcagtaatcc gttcgatgct tttttactga tcacgggtat gaagacactt gaactgagaa
    13861 tggacaggca ttgtcacaac gcgatggctg tcgctaattt tctgcaggag catccttcgg
    13921 tcgaaaaagt aaattataat gggctcgctt ctcatcctga ttttgctgtc gctaaaaaac
    13981 aaatgcgcca tcccggcgca atgttgagtt ttgaattaaa gggcggcctt gaagccggaa
    14041 aaaaatttat cgataatctg cagatgtgta cacgggctgt ttcactcggc accgcggaca
    14101 cgcttatctc tcatccggcg tcgatgagtc actacggtgt gtcaagggaa gagcgtttgc
    14161 aatttggaat aacagacggc ctgattcgta tgagcgtcgg cattgaaaac acggaagaca
    14221 ttttaactga cctggataat tcattacaag gatgagtaaa aagatcgcaa ttgtgggcgc
    14281 gggcatcagc ggtttggcct gcgcttacct cttgagcagg aaaaattaca gcatcaccat
    14341 ctttgcaaag gctttttcac cggacactac atcgaaccgt gcagccgcat tttggtttcc
    14401 ctatcatata cgtaacgatc gcaggggtat tgaatggtgc cggacgagct atcgcgtctt
    14461 caggcagctt atgcacgatc cccgcaccgg catcagcatg aaacagctaa taaaagtagt
    14521 gcgtgaagat gtagttgaag atgaacctgt gtggattgaa ttcatgcccg aaggttcgat
    14581 acaaatggtc ccgaagaaag aattgcagcc gggcgttgca aaggcctatg atgtgcaggt
    14641 gcctctgatt gagacgcaga tctttcttcc ataccttaag gaatacctgt taacgaaaaa
    14701 cgttgccttt gaacaggcgg acgtgaaaga tcttcaatca ttgcagtcat cgcacgatgt
    14761 tgtgatcaac tgcgccggac ttggtgcgcg ggatctatgt gatgataaga acgtggttcc
    14821 ggttcgcggc caggttgcat tgatcgaaac gctaagtgat tttccgatct atcttgataa
    14881 cgaaaaacct ctttacatcg tgccaagaaa agatgcaatg atcgtgggcg gcacgtatga
    14941 agaaaatatt tttgatgagt ttaccgagcc ggaaacaata gagaagatac tttgtaatgc
    15001 ttatgaagtt tttccgcagt taaaaaagca aaagataatt ggaagttggg cagggctgcg
    15061 tccataccgg cccgtagtga gagtagaacg cgaagaaaac attatccata attatggcca
    15121 cggaggcagc ggatttacgt tgtcgtttgg ttgtgcggag gaggtggtca aattggttga
    15181 ggaggcttaa agaaaaaatt caatacgcaa tgatcaatac gcacgacagg ccattgaaaa
    15241 ttgaatattg atttattgaa tattgagtgt ttggaaaaaa tgataggaga aaaatattta
    15301 atattcaatg cgcaataatc aatactcagg gacacgttca aaattgaaaa ttgaacattg
    15361 aacatttcat ctatcggcta ttgagtattc aaaacaattt gcaacccctt gtgaacagat
    15421 ccgttattca ctctaacaaa aaactatggg catcactata cgccgcgcag ctaaggaaga
    15481 ctgcaaaaga ttattggagc tggtgaaaga gcttgcagaa tacgagcggg cgccacatga
    15541 agtgaccgtt acgctgcagc atttcgaaga cagtggtttc ggcgataatc ctgtatggtg
    15601 gggctttgtt gcggtctcat ccaacgaatc ttttacgctt aacgaaagtg cgatcctcgg
    15661 gtttgctttg tactatgttc gttattcgac gtggaaggga caacgcatgt accttgaaga
    15721 catcctcgtc accgaaaaag cacggggcca gggcattgga aaattattgt tcgataggtt
    15781 gatcgaagaa gcgagagaaa aaaaatttaa cggcattgtg tggcaggtgc ttgaatggaa
    15841 tgagccggcc atcaacttct ataaaaaata caatgcaaaa cttgacgcgg aatggatcaa
    15901 ctgcagcatt gagttaggcc agggtccggc gatcgaacat ctttaacttc tttcaacttt
    15961 tccctggtca cttgcaaaat caatttcggt aaatttttta tttttggtag tagttttatg
    16021 tttcaaactg aacttctgct gaatgagaaa accctttatt tctgtttttt attttttgat
    16081 atttagctgt actaatgcgc aacaactgcc cgcgtttgga aaagtgtcgc aggaagagct
    16141 gctgatgaag gaatgcgcct ttgaaacatc cgcgccggct atgtacctgc ttaatgaaga
    16201 gacaatttcg tttaaagaag atgcttacga cagcaagacg atctatgaac gccgcgcaag
    16261 aataaagatc ttcgataagc acgggtatga gtatgccacc gtggtgatcc ctgatgcaag
    16321 gagcaggggt attaaggtaa ccgacctcga tgcttacgtt tataatcttg cgccggatgg
    16381 aaaaatgaaa gttgaaaaag tcgatcgcga tcaaatattt aaagaaaaac aaaatggcaa
    16441 aaaaaacgcc ggtagtttgc gctttacttt tcctaacctt caacccgggt ctgtaattga
    16501 ataccgctac acccgggtga aaaaaaatac cggcgttctt gaaccctggt tttttcaaag
    16561 cctcatccct gtacagatct cggtttgtaa aataaatgtt ccatccggag tggaacttaa
    16621 gacgcgtata gtcgccactc aacttgcaga cgaggactct tccattacca gcagcgatga
    16681 aaattcccgc taccggttta tacaaatcgt gctccacaag gtgccatcct ttgtcgtaga
    16741 accctatatg tcgtctatca acgataacct ggagagagtc gagtttttta tgtaccgcag
    16801 tatagttttc ttcctggcca atgcacccga ggaaagatgg aagctcatgg gaagcatgtt
    16861 gaaagatttc gcgtttttcg gcaggcagtt cgatatgccg gtgcagggca cacaagcctt
    16921 gatcgactcg atcaaaaagc tttcgacaaa cacggaaaaa ataaacgcag tatatgaagt
    16981 ggtgaaagac cgtgtgaaat ggaacactga ccaggttttc ctggccgaag atatccagga
    17041 cgcctggaac accaggagcg gaagcagtgc tgaaataaat atcctcattt taaatttatt
    17101 gcgaaacgtt ggcgtctctt gcaaaccgct tttaataagc acacgggaaa acggcaggat
    17161 agagatggca ttccccacgc ttggccagtt tgacggtgtc gatgttttaa taaccgatag
    17221 cataaacaat tttattcttg atggtaccca gaagtaccag tcgtatcgta ttcctcctct
    17281 gaacattctt aacagggacg cattcgtgat tgactccgta tgtcattggg tctctatcga
    17341 ggacaatact ccgttgatga acagctcaac gtatgtgaag gctacgctgg acagctcggg
    17401 cgtgttacag ggatctgctt cgatcgttat gaaagattat gcgaaggcgg aagaattaaa
    17461 agacagggaa aaggatgagg ccgaaaggga ggaacagcaa aaagattttt tgcaaatcga
    17521 caatggagga ataaagatag attcggtaag tgataatgac tcagccgata taagccagcc
    17581 gcttgaggtg aaaatgaact ttcattattc tctatccaat aacgataatt tttactttct
    17641 aaacccgtat ctattttcca tgtttcgcaa aaatccattt actacaactg agcggcacag
    17701 tgatatagac ttcggttgta tgcaacgctt cctgacttat ataattatcg acatacctgg
    17761 caatttcagc gtcgaagaaa ttccaaaaag tgttcttctg cgaacagcag atacaagcat
    17821 ttcttttaga aaagatgttt catttgaaaa caaccgggtt ggtatccggt atgattttga
    17881 attgaacaac cccctgttca ctaaggaaaa ttacccgggt gtgaaagctt ttttcgataa
    17941 aatatacggc atcattggtg agcagatact gctgaagaag aaagagtaat tcttttgacc
    18001 tacactacat gaagtcacgc cgcgcggttg ccgactcatg atacattgtt ataagtgaat
    18061 tcgaaaattt gcgaaagcaa tgtgataacg taattcgcca ttcttaataa atgtactttc
    18121 gctgcaatca atttttcgct cgatggcccg caacgatatc acaaagacgc cgattgaaaa
    18181 actcggctat aattttatca aacaagaata tttgccaaag gggaaagacg agtattacct
    18241 ccgcgatctt caaaaccgca gcggaatcat ttatcgaaat cttacggcct acgaaataga
    18301 agctctcgta aaaaatcgca acacaagcga cgattggaac aagattttcg ttagcgatgc
    18361 attcaacccc gaactggtga agaattgtaa attctttggc ctggtgcgca ttggcaagct
    18421 cgaaccgtgg ttccttgaat tcagcgacat gaaatatgcg gtcgggttgt acaactcgat
    18481 cataataagc accgacatcg gcgataacgt agtgatagat catgtaaatt atctttccca
    18541 ctatatcatc gggaatgaag tgatcctggt gaatgtaaac gagcttgcaa ctacagatca
    18601 ctcaaagttt ggaaatggca ttttaaaaca aggcgaggat gagagcgtcc gcatctggat
    18661 ggagatctgt aatgagaacg gcggaagaag cgttatccca ttcagcggca tgcttcccgg
    18721 tgatgcttat atgtggagca agttcaggga tgacgagttg ttactggaaa aatttaaaga
    18781 gcttactgag aaagaattta aaaacgagcg cggattttat ggcaaagtgg gcgacagaac
    18841 ggtgataaaa aattcggcga taatcaaaga tgtttggatc ggcagtgatg cgtatatcaa
    18901 gggagcgaac aagctgaaga atttgacgat acactcttcg caggatgcaa aaacgcaaat
    18961 aggtgagggc tgcgagat
//
LOCUS       DASQJI010000639         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2542655,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000639 DASQJI010000000
VERSION     DASQJI010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2542655"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            582..1562
                     /locus_tag="VEV83_17375"
     CDS             582..1562
                     /locus_tag="VEV83_17375"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HYK46954.1"
                     /translation="MKVQHIIGADLSKRTIDLFFQSHHQIENNKIGFSQMMKWIKQHN
                     ITASEVMIVMEHTGLYSYCFEHFLHEHHIAFCKVNPYAVKRSMGLVRGKSDKIDARRL
                     ANYGFKERQTLTIEPVAGKELQRLQLLFTTRERLVKHKAALLNAVSEYRNIGLAASDL
                     IMTTHTRVIKSFEKEIERLQGEMDAIVQGNPSIKQNQCLLQSIKGVGKVLSIATIIKT
                     RNFTRFQNARKFACFCGTAPFEHTSGSSIRGKTKVSQLADKTMKTLLDLSAKSAIQYD
                     KELKDYYLRRTESGKSKMSTINIVRNKILYRMFAVVKRQTPYVENYLQTA"
BASE COUNT          542 a          288 c          301 g          478 t
ORIGIN      
        1 aaggatcgcc atcttcgtca gtggtttcta aaaaccttgc agagcgttcg caaacgatgt
       61 tgtaatcctg gtcaaaaaga aaaatttttt tattggtctt accaacatca atgacggcta
      121 tagcaggctt cttatttttc atcgttagcg aatagcaagt aaaaattaaa ggaatttttg
      181 ttagtgatca attataggaa tctaagtatt agtataaaaa caagtatcag agacttttta
      241 tgaattatcc ccaaattcat gatgcttttt gttgggtagt gcttgatttc ttttggacgt
      301 tcactgtttt tttgttacaa atttatttta ccacggagat cctttagata aaattagttc
      361 attgacatat gggatagcaa ataataggaa gagaatgaat tttgtggaag gaaagtgagg
      421 tgaactttac ggagaccaag acttttaggt ctagtttgtg tattagtcct cactttcacc
      481 tccacggttg ccagtagacc tatttagaat gttaagtcct taaagactaa ataaaggttt
      541 taggttactg caactatttg atcatttcta aaagcaaagc tatgaaagtt caacacatca
      601 tcggagctga cctctccaaa agaaccattg atcttttctt ccaatctcat catcaaattg
      661 aaaacaacaa aataggattc agtcaaatga tgaagtggat aaaacagcac aacatcactg
      721 cttctgaggt gatgattgta atggaacata caggacttta tagctactgc tttgagcact
      781 ttcttcatga acatcacatt gcattttgca aggtcaaccc ttacgcagtc aaacgatcta
      841 tgggccttgt tcgaggtaaa tctgacaaga tcgatgcccg aagactggct aattatggct
      901 ttaaagaaag acaaacatta accatagaac cagttgcagg caaagaactc caaagactgc
      961 agttgctctt cacaaccagg gaaagactgg taaagcataa agcagcattg cttaacgctg
     1021 tcagtgagta ccgcaatatt ggtcttgctg caagtgacct gattatgact actcacacca
     1081 gagtgatcaa aagctttgaa aaagaaattg aaagattgca aggtgaaatg gatgcaattg
     1141 ttcagggtaa tccatccatt aagcagaatc aatgtttact tcaaagcatt aaaggagttg
     1201 gtaaagttct ttccattgca acgatcatca agaccaggaa ctttacccgc tttcagaatg
     1261 ccagaaagtt tgcctgtttt tgtggtactg ctcctttcga acatacgtca ggcagcagca
     1321 ttagaggcaa aacaaaagtc agccagcttg ctgataaaac catgaaaaca ctgcttgatc
     1381 tttctgcaaa atctgctatc caatatgaca aagaactaaa agattattat ttaagacgaa
     1441 ctgaaagtgg taaatcaaag atgagtacca tcaatatcgt ccgaaataag atcttatata
     1501 gaatgtttgc cgttgtgaaa cgacaaacac catatgttga gaactactta caaactgcat
     1561 aaaaactatt ttttggcagt ttgttgatct tagaatacac aaagttttt
//
LOCUS       DASQJI010000640         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1311432,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000640 DASQJI010000000
VERSION     DASQJI010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311432"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..489)
                     /locus_tag="VEV83_17380"
     CDS             complement(145..489)
                     /locus_tag="VEV83_17380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYK46955.1"
                     /translation="MNNTPAQVVVLNNPGNNENVRMDFFHLKKAAMILRALNHKLRQQ
                     LLRLVDEHQKITVTEIYVKLRLEQSVVSQHLAIMRRAGIVSTTRDGKFIYYSVNYKRL
                     KEISNFVEQLVG"
     gene            complement(570..1247)
                     /gene="tsaB"
                     /locus_tag="VEV83_17385"
     CDS             complement(570..1247)
                     /gene="tsaB"
                     /locus_tag="VEV83_17385"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HYK46956.1"
                     /translation="MALLLNIDTAFETASVAVSRSGEVVAVERNHEQKGHASFLQPAI
                     QRVCECAGVALSAIDAVAVANGPGSYTGLRVGLASAKGICYALHKPLILINTLDILAC
                     ALKEEAPHDSSTVLFCPLIDARRMEVYTALYDIHLNLIKEPAAVVLTVDFLKEEKENY
                     RILLAGNGSSKLRSFMQHDNIIYSTVEAEMRHFVRLAHHAYGLKKFADVAYSEPIYLK
                     PVYIKQP"
     gene            complement(1248..1892)
                     /locus_tag="VEV83_17390"
     CDS             complement(1248..1892)
                     /locus_tag="VEV83_17390"
                     /inference="COORDINATES: protein motif:HMM:NF012928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HYK46957.1"
                     /translation="MHIAVRSTEKQRLEFEQKGFDPHVSVTWLASHEKLFHVDADAVF
                     DLVFNDVDISANEFVEETLVFANAVSCTGLNIGRKNYVRINAWEGFLKRPLVEVSGQN
                     DEYYILAAKTLNALGWKYVWTADDHGFISARIVAMIINEAYYALEEKVSTKEQIDVAM
                     KLGTNYPFGPFEWSEKIGMNNIYELLRKLSMENDRYTIAPLLRQIALQQKQNFS"
BASE COUNT          545 a          469 c          418 g          597 t
ORIGIN      
        1 tcgcgaagcg gatcaacgat agcaacttca ccgttactct caagataata tgccgcctca
       61 cttagacacc cggtatataa ttgctcaatg tacatcctgc atgtttttgc aaaaatacaa
      121 ttaccggaag aagcttttta cattttaacc aaccaactgt tcaacgaagt tgctgatttc
      181 ctttagtcgt ttatagttca cagagtagta gataaatttt ccatcgcgcg tggttgacac
      241 gattccggcg cggcgcataa tagccaggtg ttgcgaaacg actgactgct caaggcggag
      301 ctttacatag atctccgtaa cagtgatctt ttggtgttca tcaaccaggc gcagtaattg
      361 ctgccgaagt ttgtgattca atgcgcgaag gatcatcgct gctttcttca gatggaaaaa
      421 atccattcga acgttttcat tattacccgg attgttcagt actactactt gagctggggt
      481 gttgttcata cacagggtgt ttatagtgct cccaaagtta ttaaaattat tttatataca
      541 taacacaata attgtgcccc caaaatattt catggttgct ttatgtatac cggcttcaga
      601 taaatgggct cactataggc gacatcggca aattttttca aaccgtaagc gtggtgtgca
      661 agccttacaa aatgccgcat ttctgcctca accgtagaat aaattatgtt gtcatgctgc
      721 atgaatgatc tcaacttgga actaccattt cccgccaaca gtattcgata gttttctttt
      781 tcctctttca ggaaatctac agtaagaaca acggccgctg gctcttttat caaattaaga
      841 tgaatatcat ataatgccgt gtagacttcc atgcgtcgcg cgtcgatcaa cgggcaaaac
      901 aaaacggttg aagaatcgtg cggtgcctct tcttttagag cacaagcaag aatgtcgagt
      961 gtgtttatta agatcagcgg cttgtgcagc gcataacata ttccttttgc cgatgccagt
     1021 ccaacacgaa gaccggtata actaccggga ccatttgcaa ctgcaactgc atctattgcc
     1081 gataaggcca cccctgcgca ttcgcacacg cgctgtattg cgggttgtag aaaggaagcg
     1141 tgaccttttt gttcgtgatt tctctcgaca gcaaccactt cgccgctccg gctcacggcg
     1201 accgatgcag tttcaaaagc ggtatcgata ttgagcagca gagccaatta agaaaagttt
     1261 tgtttttgct gcaaagcaat ttgccggagt agtggcgcga ttgtgtagcg gtcattttcc
     1321 atcgataact ttcgaagtag ctcataaatg ttgttcatcc cgatcttttc actccactca
     1381 aaaggtccga agggataatt tgtgccgagt ttcattgcca catctatctg ctcctttgtg
     1441 cttacttttt cttcaagcgc ataataagcc tcattaatta tcatcgcaac gatgcgagcg
     1501 ctgataaagc cgtgatcgtc tgcggtccaa acatatttcc aaccaagtgc gttcagcgtt
     1561 tttgctgcca gaatataata ttcatcgttc tggccggata cttcgactaa cggtcttttt
     1621 aaaaatcctt cccacgcatt tatcctcaca taattcttac ggccgatatt aaggccggtg
     1681 caactgacgg cgttggcgaa aaccagggtt tcctctacaa attcattggc cgaaatatca
     1741 acgtcgttaa acacgagatc aaacacggca tctgcgtcaa catgaaaaag cttttcatgg
     1801 ctcgcaagcc atgttacact tacatgcgga tcaaaacctt tttgttcgaa ttccagcctt
     1861 tgcttttccg ttgaacgtac tgcgatgtgc atctctgccg tttaacacgc aaaaatagct
     1921 tgtatgaatg aaggaaataa tgcaacttgc tgttctctca caagtgagcg cgcgttcgac
     1981 agctgttttg cgaagttgcg ggcatcgtag ctgtgataaa taaaaattt
//
LOCUS       DASQJI010000641         9087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_853558,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000641 DASQJI010000000
VERSION     DASQJI010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9087
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853558"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VEV83_17395"
     CDS             <1..448
                     /locus_tag="VEV83_17395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46958.1"
                     /translation="AYQSAKIEDNIAGFLSLNAASEVPSTNVNVKALKNFTKQFGANN
                     EAKWYQTSEAFVAQFIATGIETKVIYDLKGNWHSMLRTYSEDKMPFDVRDLVKSTYYD
                     FSIMVVYEITHADNVAYILKIQDSKTIKTLRVRDGNVEVIGDYTRG"
     gene            570..1649
                     /locus_tag="VEV83_17400"
     CDS             570..1649
                     /locus_tag="VEV83_17400"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK46959.1"
                     /translation="MANSDASKVAAFLNSLVAKNQTPGVQYVVLKNDETSFEHTAGVA
                     EFEHGRPITKQTSFNACSVTKTFTSLAIMQLLEEGKIKISDDASAYLDPYPFPEEITI
                     QQFLSHTSGLSNPIPLRWAHLHEEDASFNSDAFVSAVLSAHSKLKHHPGQHFAYSNLN
                     YLVLGKVVEKVSGMDYRAYVHRHIISKLLLNNMPLQFLVTSDSNYARGYQKKLTAINT
                     ILGFFLDRKKFTEPSSNKKWIKFRKYYVNGTAYGGLIANAYSLSAFIKTLFQPGSILL
                     SDEYKKTLLTKQKVRNGKMIEMTLGWFTGRLNDANYFTHAGGGGGYYCEMRKYPEKNL
                     ITSIMFNRTGINDERFLDKVDRFFL"
     gene            1865..3544
                     /locus_tag="VEV83_17405"
     CDS             1865..3544
                     /locus_tag="VEV83_17405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46960.1"
                     /translation="MEAPFSNVRRNYIRHAFAGAFLFIGVQLVAQEDHAHMHMGNAGE
                     LGKVNFPVSCDAKTQKQFEAAVAMLHSFWYDQSEKNFAEITKTDPQCGIAYWGIAMSL
                     WHPLWQPPDNATLKKGWDIVETARSKGGKTELENELIAALELFYKDYDKAPALARTKA
                     YEDAMKKIYEKYPDNTEVSAFYALSLLGTVQAMLPFVDKTYAKQKQAEQILEKIFTAQ
                     PSHPGASHYIIHSFDYPDLATLALPAARNYAKIAPASPHAQHMPSHIFTRLGLWDESI
                     ASNIASAQTAKDFVEKNKPGCASYDQLHALDYLEYAYLQCGEDKKAQEVCDELKPMNK
                     VDRDELAAAYAFAAVPTRFAIERSQWKLAADLELHPAGFSWNLYPQAEAIIHFGRAVG
                     YARTGDIKSSDNEIQKIKSLYDTLVSRKMMYWAGQTKILETEGQAWNAFAQKKFDDAL
                     TKMKDAVNIEDSSEKHPVTPGAILPAHEQLGDLLLLLNKPADAFPEYETSLKSAPNRF
                     NSLYGAARSAQLKGDKTSAAKYYIQLMSLTSHADTERPELKEARTFVAAKN"
     gene            3597..5540
                     /locus_tag="VEV83_17410"
     CDS             3597..5540
                     /locus_tag="VEV83_17410"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK46961.1"
                     /translation="MPSTRQLAAIMFTDIVGYTALMGEDEKKAFEILRKNRQLQKPLI
                     KKFNGRWIKELGDGVLASFTTVSDAVLCAVKIQDVCNSIDNLKLRIGIHLGEVVFEDD
                     DVFGDGVNIASRIQALAPVGGIWVSEAVYNTIINKKNIEAKFVAEELLKNVKGPMRIY
                     EVTINNAVLEDSKLRNKEEVQNKTTPQKSIAVLPFVDMSASHDQEYLGDGLAEEILNS
                     IAHLKELKVAGRTSSFQFKGAKVDLREIGDKLGVSTVLEGSVRKQGNRLRVTVQLINV
                     QDGFHLWSERYDRDMHDIFAIQDEIAFTITEQLKITLLEKDREKIMKTSTHNAEAYEL
                     YLKGRFHLYRRGSSILKGLQFSKQAITIDPSYALAHAGYAYANTLAAAYTFFPGRQVI
                     KEVKQAAETAIKLDDTLGEAYFSLGYYYVCFEWNWEQSKKNFQKAIELNPGYVQARSL
                     YAMICLGWVEGKFEEAEEQQRIAIKLEPLSAIDHADLAWTLLMAHKFEEALAIAKIGI
                     ELDNNSFLSHRVAGLAYMQLKRYEEAINTFTYLLKISDRHQHAVNSLIWAYCSSGNFQ
                     EARILMNELEKKSATEYVAGTYFGLSAAYLGDLDKAFHALEKACDDLDAHILTIKPAP
                     YVPAALRNDPRFQNLLDRIDFPK"
     gene            complement(5587..5970)
                     /locus_tag="VEV83_17415"
     CDS             complement(5587..5970)
                     /locus_tag="VEV83_17415"
                     /inference="COORDINATES: protein motif:HMM:NF013331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HYK46962.1"
                     /translation="MANTDTIDQKPSLYERLGGEPGLRKIVNDILDRNLNNPLIGRHF
                     QNTDMERLKQLVFDFFSMGTGGPHKYTGKDMRSAHAGLNISEQDFLIGNDDVLRALEE
                     NGIAEADRNEVIGILNSMKEDVIRK"
     gene            6223..8481
                     /locus_tag="VEV83_17420"
     CDS             6223..8481
                     /locus_tag="VEV83_17420"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK46963.1"
                     /translation="MPASHQLAAILFTDIVSYTAIMQHDEEKARIIIKRHNSVLEKIV
                     AAHHGEVLNYYGDGSLCIFSSATESVRCAIEIQKELQTEPIVPLRIGLHVGEVFFEDR
                     KALGDGVNIASRIQSLGQANTVLFSKEIFDKIRNHSEFKAVSLGHFDFKNVDDSIEVF
                     ALTNEGLAVPKREKMEGKVKEVKNKNTIRRNFIITVSMLLLLFVGYFFYVRSSEQKSA
                     GAEKSIAVLPFKNISINKAQNEPFCIGVALELQKKLQLLGGLIPIASQSVEKYRDTKL
                     SIRDIANELGGVKYIVQGNVLRDKDKVKVFVSLIDVASDKEIWSDDFPGEVKDFFSLQ
                     ENIAQRIASEVQVKITPDEQSRINRIATENAAAIDAYNEALTAYVTLVSAVHPLYWDS
                     LPSDPKLYSDYLNTLSLCDNAINADPSMAEAYVLKGQTFIYRISSWAASGSEVTLISD
                     SGRALANKALAIDQSSADAFLLLWSSAAVSGDSAARYYLDRAYSINPNNFDVNRALGE
                     RYGWYDPEKAIRFCKKAIRLNPVSLLTPSVYSSLAFTYHTCGDFEKAEQYAKKAVVLA
                     NANTMIETEAIRNLTIIYLHWGKADSVIKYANLYVKQEPNALYEIAEASCNLKNDCSK
                     AAAMYDTLWQRYPNRNNPHRWAVALFNSGRIKEGEEKIALADKEYKARHDTLGYDYAG
                     ICAFKGDKETALRILRQWKWSWGSPYLIQRDKLFDNIRNDKEFRDIVRKAVDDKARVR
                     EKIDKLEEEGKL"
BASE COUNT         2758 a         1861 c         2017 g         2451 t
ORIGIN      
        1 cgcttaccag tctgcgaaaa ttgaagacaa catcgccggg tttctcagtt taaacgctgc
       61 ttctgaagtt ccttccacta acgtaaatgt gaaggctcta aaaaacttta caaagcaatt
      121 cggtgcgaat aacgaggcaa aatggtacca aacgtccgaa gcttttgttg cgcaatttat
      181 cgcgaccgga attgaaacaa aagtgatcta tgatcttaaa ggcaactggc acagcatgct
      241 gcgcacctac agcgaagata aaatgccttt cgatgtgcgc gacctcgtaa agagcaccta
      301 ttatgatttc agcataatgg tagtctacga aatcacacat gccgacaatg ttgcatatat
      361 cctgaagatc caggacagca aaacaattaa gactttaagg gtcagggatg gcaatgtgga
      421 agtcatcggt gattatacaa gaggataatc ttcgtctcat aagaagggtg taagaggcac
      481 tttctgcagc ggttgatctc aactgctgtt tttgttttat gaagtctgga agtacttcga
      541 aactttttta tcttttcaaa aaaaaattgg tggccaattc tgacgcgtca aaagtcgcag
      601 cttttttaaa tagcctcgtc gcaaaaaatc aaacacccgg tgttcagtat gttgttttaa
      661 agaatgacga gacatccttc gaacacaccg caggagttgc agagtttgag catgggcggc
      721 cgatcaccaa gcaaacgagc ttcaatgcct gctcggttac aaagacattt acgtcactcg
      781 ccatcatgca gcttctagaa gagggaaaaa taaaaatctc ggatgatgca tctgcatatc
      841 tcgacccata cccatttccg gaggagataa ccattcagca gtttctgtcg catacgtcgg
      901 gcctgtccaa cccaatacct ctgcgctggg cgcacctgca cgaagaagat gcttcattca
      961 attcggatgc attcgtctcg gcagtcttgt cggcccattc aaagttgaaa catcatcccg
     1021 gacagcattt tgcttatagc aatctcaatt acctcgtgct tggcaaggtc gtcgaaaaag
     1081 tttccggtat ggattaccgc gcgtatgttc accggcatat tatttcaaag cttttattga
     1141 acaatatgcc actgcaattt ttggtgacaa gcgattccaa ttatgcaaga gggtatcaaa
     1201 aaaaattgac ggcaatcaat actatcctcg gtttctttct cgaccgaaaa aaattcaccg
     1261 aaccgtcttc aaataaaaaa tggatcaagt tcaggaaata ttatgttaac ggaaccgcat
     1321 acggtggttt gatcgcaaat gcatactcgc tctcggcgtt cattaaaaca ctatttcaac
     1381 ccgggtcaat tttattatcg gacgagtata aaaaaacact gttgacgaag cagaaagtac
     1441 gcaatggcaa aatgatcgag atgacgctgg gctggttcac cggccgctta aatgatgcga
     1501 attattttac gcatgccgga ggtggcggcg ggtactattg cgaaatgcgg aagtatcccg
     1561 aaaaaaattt gatcacatcc attatgttca accgcacggg aataaacgat gaacgtttcc
     1621 ttgacaaagt ggatcgattc tttttatagt aaccgctgag cacttaaaat cgtcaggcag
     1681 tgttagaaga gtattccagg caacgaactg ctctgctcag atggcttcgc gcgaatttcg
     1741 aaaaccggtc cgaaatcaaa tagtgaagaa aagtcaacgc cgcacatctt cccgaagagg
     1801 tcggtaatcg attacaggtt attatcttta taagctaaat tttctttcac tgaaaaagaa
     1861 aaacatggaa gcaccatttt caaacgttcg ccgtaactat ataagacatg cctttgccgg
     1921 cgcatttctt tttataggcg tacaacttgt cgcgcaggag gaccacgcgc acatgcacat
     1981 gggtaatgcg ggtgaactcg gcaaagtaaa ttttcctgta agttgtgatg caaaaacgca
     2041 gaagcaattt gaagccgccg ttgcaatgct gcattcattc tggtacgatc aatctgaaaa
     2101 gaattttgcg gagatcacaa aaacagatcc tcagtgcggc atcgcatatt ggggcatcgc
     2161 catgagtctc tggcatccgc tgtggcaacc gcccgataac gctacattaa agaagggttg
     2221 ggacatcgtg gaaacggcaa gatcaaaagg cggcaaaaca gagctggaaa atgaactcat
     2281 tgccgcgctc gaattgtttt ataaagacta tgacaaggcg ccagcgctcg cacgcacaaa
     2341 agcgtatgag gatgctatga aaaagattta tgagaagtat cctgacaata ctgaggtctc
     2401 tgcattctac gctctttccc tattgggcac agtgcaggcg atgcttccat tcgtggacaa
     2461 gacttacgca aagcaaaaac aggctgaaca gatacttgaa aaaatattca ctgctcaacc
     2521 ttctcacccg ggtgcgtctc attacatcat ccattctttt gattatccgg atctcgcaac
     2581 attggcgtta cccgcggcaa ggaattatgc aaaaatagca ccggcgtctc cgcatgcaca
     2641 gcacatgccg tcgcacattt tcacgaggct gggactctgg gacgaatcta ttgcgagcaa
     2701 tattgcatct gcacaaactg caaaagattt tgttgagaaa aacaaaccgg gctgtgcatc
     2761 atacgaccaa cttcatgccc tggactatct cgagtatgca tacctgcagt gcggcgagga
     2821 taagaaagcg caggaagtgt gcgatgaatt aaagccgatg aataaagttg atcgggatga
     2881 actcgctgct gcatatgcat ttgctgccgt gccaacgcgt tttgctattg agagaagcca
     2941 atggaagttg gctgccgatc tcgaacttca tcctgccggc ttttcctgga atctctatcc
     3001 tcaggcggaa gcgatcattc attttggccg tgcagtgggt tatgcaagga caggcgacat
     3061 taaaagcagc gataacgaaa ttcaaaaaat taagtctttg tatgatactt tggtgtcaag
     3121 aaagatgatg tactgggcgg gacagacaaa gatcctcgaa acagaagggc aggcatggaa
     3181 tgcatttgca caaaaaaaat tcgatgatgc gcttacaaaa atgaaagatg ctgtcaacat
     3241 agaagacagt agtgaaaaac atccggtcac tccgggagcg atccttccgg cgcacgaaca
     3301 gttgggagac ttgttgctac tactgaacaa accggctgat gcatttcccg aatatgaaac
     3361 gtccctgaag tctgcaccga atcgattcaa tagcctatat ggagctgcaa ggtctgcgca
     3421 attaaaagga gataagacca gcgctgcaaa atattacatc cagttgatga gtttgacttc
     3481 acatgcggat accgaaaggc ctgagttgaa agaagcaagg acatttgttg cggcgaaaaa
     3541 ttagttttgg cgttatttga ttttcttttt tctgtttttc tgtataaact ttcttcatgc
     3601 catccacccg ccagcttgca gccattatgt ttaccgatat tgtcggatat accgcattga
     3661 tgggtgaaga tgaaaaaaaa gcttttgaaa ttttgcgaaa gaaccggcag cttcaaaaac
     3721 cactcataaa aaaatttaat ggcaggtgga taaaagaact gggcgatggt gtgctcgcaa
     3781 gttttactac agtatcagat gccgtgttat gcgcagttaa aattcaagat gtatgcaaca
     3841 gtattgataa cctcaaacta cgcataggca ttcatcttgg tgaagttgta tttgaagacg
     3901 acgacgtttt cggagatgga gtgaacatcg cttcaaggat ccaggctctt gcacctgttg
     3961 gtggtatctg ggtttccgaa gcagtttata ataccatcat caataaaaaa aatattgaag
     4021 cgaaatttgt ggctgaagaa ttattgaaga acgtaaaagg acctatgcgc atttatgaag
     4081 taacgataaa taatgcagta ttagaggata gcaagttacg aaacaaagaa gaagtacaga
     4141 acaaaacaac acctcaaaaa agcattgcag tactgccctt tgtagatatg agcgcatcac
     4201 atgatcagga atatttagga gatggattgg cggaagaaat tcttaattca atagcgcact
     4261 taaaagagct aaaagttgca gggcgtactt catcttttca attcaaggga gccaaggtag
     4321 atttacgcga aattggagat aagctgggag taagtactgt gttggaaggc agtgtgcgga
     4381 aacagggaaa ccggcttcgg gtgacggtgc aattaattaa tgtgcaagat ggttttcatc
     4441 tctggagtga gcgatatgac cgtgacatgc atgatatttt tgccatacag gatgagatcg
     4501 ctttcaccat aaccgagcaa ttaaaaataa ccttattaga aaaagaccgc gaaaaaataa
     4561 tgaaaacttc tacacacaat gcagaggcct atgagcttta tttaaaaggg aggtttcatt
     4621 tatacaggcg cggcagttct attttaaaag gattacaatt ttcaaaacag gccattacga
     4681 ttgatccatc ttatgcacta gctcatgcgg gctatgcata cgccaacaca ttagccgcgg
     4741 cttatacttt tttccccgga agacaagtaa taaaagaggt gaaacaagcg gcagagaccg
     4801 caataaaact ggatgatacc ctcggcgagg cttatttttc gcttggatat tattatgtgt
     4861 gttttgaatg gaattgggag cagtcgaaga agaactttca gaaggctatt gaattgaatc
     4921 cagggtatgt gcaggcacga tctctgtatg ccatgatctg cctgggctgg gtagaaggaa
     4981 agttcgagga agcagaagag cagcaacgaa ttgctataaa gctcgaaccg ctcagcgcga
     5041 ttgatcatgc cgacctggca tggacacttt taatggccca taaatttgaa gaagccctcg
     5101 ccattgcaaa aatcggtatc gaactggata ataactcatt cctttcgcat cgcgttgcag
     5161 gccttgctta tatgcaattg aagcgctatg aagaagcgat taatacattt acttatttac
     5221 ttaagatctc cgacaggcat cagcacgctg ttaatagttt gatttgggct tattgcagta
     5281 gtggaaactt tcaggaagcc aggatcttaa tgaatgaatt ggaaaaaaaa tcggcaaccg
     5341 aatatgtggc cggtacttat ttcggattgt ctgcagctta tctcggcgac ctggataagg
     5401 cttttcacgc gttagaaaaa gcttgtgatg acctggacgc ccacattctc accattaaac
     5461 ctgcacccta tgttccggct gcgcttagaa atgatccgcg ttttcaaaac ttattagaca
     5521 ggattgattt tccgaaatag cttatcaaca cagatatgag aaggattcaa atcagcttca
     5581 gaaggcttac ttcctgatga catcttcctt catcgagttc agaataccta ttacttcatt
     5641 tctgtccgcc tctgcaattc cattttcttc taaagcccgc aatacatcat cgttgccaat
     5701 taagaagtcc tgttcgctta tgtttaaacc cgcatgtgcc gaacgcatgt ctttgccagt
     5761 atacttgtgt ggtcctcctg ttcccattga aaaaaaatcg aagactaatt gtttgagtct
     5821 ttccatatca gtattctgaa aatggcgacc tattagggga ttatttaaat ttctgtcaag
     5881 tatgtcattg acaattttcc tcagacccgg ttcacctccc aatctttcgt aaagggaagg
     5941 tttttgatca attgtatccg tgtttgccat aacatgattt cttttggagt gaataattta
     6001 tttgtatttt ctaaaattca atttcttgat gtgctgccga ataataactt gctttatcga
     6061 tggttacatg cgtacaacag catgtcaacg taaatttttt aaagttacaa attcaaatgc
     6121 aagtattctc aaggcaggat ttgacaaatg agttagggaa cgatcagaaa acgaaagaat
     6181 tgcaactata ttattttctt atctttctga aataaactac tcatgcctgc ctcacatcag
     6241 cttgccgcta ttttgttcac agacattgtg agctatacgg ctatcatgca gcatgatgaa
     6301 gaaaaggccc gcatcatcat caaacgtcat aattcagttc ttgaaaaaat tgttgccgcg
     6361 catcatggcg aagtactgaa ttattatggc gacggaagcc tttgcatttt ttccagcgct
     6421 acagaatctg tcaggtgcgc aatcgaaata caaaaagagt tgcaaaccga gcccatcgta
     6481 ccattaagaa taggactgca tgtgggtgaa gttttttttg aagaccgtaa agcactgggc
     6541 gacggcgtaa atattgcctc gcgcattcaa tctcttggcc aggcaaacac cgttttattt
     6601 tcaaaagaga tctttgacaa gatcaggaac cattctgagt tcaaagctgt ttcacttgga
     6661 catttcgatt ttaaaaatgt ggatgattcg attgaagttt ttgcattaac gaatgaagga
     6721 cttgctgtgc cgaaaagaga gaaaatggaa gggaaggtga aagaagtaaa aaacaaaaat
     6781 acgatccgtc gaaatttcat cattacggtg tcaatgctgc tactactctt tgttggttac
     6841 tttttttatg tcagatcttc tgaacaaaaa agcgctggag ccgaaaaatc gattgctgtg
     6901 ctgcctttta aaaatataag cataaacaaa gcgcagaacg aacctttttg tatcggcgta
     6961 gcgttagagc ttcaaaaaaa attacaatta ctgggtggat tgattccgat cgcttcgcag
     7021 tcagtggaaa aatatcgcga tacgaagctt tcgattcgcg atattgcaaa tgaacttggc
     7081 ggcgtaaaat atattgtgca ggggaatgtg cttcgcgata aagataaagt gaaagtgttc
     7141 gtttctttga tcgatgtcgc gagtgacaaa gaaatatgga gcgacgattt tccaggcgaa
     7201 gtgaaagatt ttttttcttt gcaggaaaac attgctcaaa ggatagcgtc cgaagtacag
     7261 gtgaaaatta cccctgatga gcagtcccgc attaatagga tagcaacgga aaatgcggca
     7321 gccatcgatg catataatga ggctttgacc gcctatgtga cattagtttc agcagttcat
     7381 ccgctctatt gggattcttt gccttctgac ccaaagctat attcggatta cctgaatacg
     7441 ctttctctgt gcgataacgc catcaatgct gatccttcga tggctgaagc gtatgtttta
     7501 aaaggccaaa catttattta taggatcagt agttgggctg cttcaggaag tgaagtaacg
     7561 ttgatctccg atagtggacg cgctctcgct aataaagcac tggcaattga tcaatcttcc
     7621 gcggatgcct ttttgttatt gtggtcttct gcagcagtgt cgggcgactc agcagcgaga
     7681 tattatctcg acagagctta cagtattaat ccaaataatt tcgatgttaa ccgtgcactg
     7741 ggcgaaaggt atggatggta tgatcctgaa aaagcgatcc gtttttgcaa aaaagcaatt
     7801 cgacttaacc cggtttctct actcacgcca tctgtttaca gttcccttgc atttacgtac
     7861 catacctgcg gagattttga aaaagccgaa cagtatgcaa aaaaggcggt ggttcttgca
     7921 aatgctaata caatgataga aaccgaggcg attcggaatc tgactatcat ctaccttcac
     7981 tggggcaaag ctgactctgt gattaaatat gcgaacctgt atgtaaagca ggagcctaat
     8041 gcattatacg agatcgcgga ggcgtcctgc aatttaaaaa atgactgcag taaagctgct
     8101 gcgatgtatg acacgctttg gcagcgttat ccgaatcgaa ataaccctca tcgctgggcc
     8161 gtagctctgt ttaatagcgg aaggataaaa gaaggagaag aaaagattgc attagccgat
     8221 aaagaataca aggcaaggca cgacacgctt ggctatgact atgccggtat atgcgccttt
     8281 aaaggggata aagaaacagc gctaagaata ttaaggcaat ggaagtggag ctggggttcg
     8341 ccctatctta ttcagcgtga taaactgttt gataatatca ggaacgataa agagtttagg
     8401 gacatcgttc gaaaagccgt ggacgataag gcgagggtaa gagaaaaaat agacaaactg
     8461 gaggaagaag gaaaattgtg attcgccata agccgctctg atttgttacg cctggattct
     8521 tattcactca ttatttccat tgaacgctat accggctaaa gattgtagat agtacttgca
     8581 atcgaattga tgctatcaga gcaacggcaa aactcacgtc cgttctttgt gatgatttcc
     8641 ttttattctc tttctaaaat aaactttctc atgcatgcac aaagatttgc ggtattgagc
     8701 cgaatgactt tcaggaatta actgttgcgc attcgcccta tgtttttcca ttgtcgcaaa
     8761 agccagccac ttgtccggat ttataaataa tctaagaaaa cgtccgggga acaaaaacac
     8821 cccaaaaaat acaaatcgga gcgttataac tggctgtcat atcaacgatt tttccgaaca
     8881 cataatggtc atgcaaaagg cgcccagtgt cgacgcattt catcattccg gctctgtatt
     8941 tccatgcacg ggatcagaac tttcttccgg tttataatgg accacttcaa tcgcccttgc
     9001 cttatcccgc agcaaaggcg gaacagagag ctttgcggct tcatggcttt cggtatcaac
     9061 aaatgcgtaa gcagtatgat cgttatc
//
LOCUS       DASQJI010000642         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2543089,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000642 DASQJI010000000
VERSION     DASQJI010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2543089"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VEV83_17425"
     CDS             complement(<1..270)
                     /locus_tag="VEV83_17425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="epimerase"
                     /protein_id="HYK46964.1"
                     /translation="MAALKVIITGATGMVGEGVLFECFQNPKVSELLIINRRHYELTH
                     PKLKELIVPDFFHLDEYSESIKDYHACFFCAGVSSVGMKEDKFTRI"
     gene            complement(369..1160)
                     /locus_tag="VEV83_17430"
     CDS             complement(369..1160)
                     /locus_tag="VEV83_17430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46965.1"
                     /translation="MKSAIVILLLACSSIAIAQNVAGFWKGTLNMSGGCFVTNNMELQ
                     IRVNGDSLYGNSYHYEDIDNYVKKKFVGLKMSSDNKIMLQETYVTTYKIPVICRVCIK
                     TYELQYSKKGNEETLSGNWGGYINETGADCGTGFIKLTRIKESAFKEVPEIEVDTGKI
                     RLDFYDNAEIDGDSISVLVNGRTVVSHQILGAKPITVFVRVDLANTFQEIEMLADNLG
                     TIPPNTAILVVTAGGKRYQLVLTSTTEKSARVRFVYNGGEKPEFK"
     gene            complement(1326..>1690)
                     /locus_tag="VEV83_17435"
     CDS             complement(1326..>1690)
                     /locus_tag="VEV83_17435"
                     /inference="COORDINATES: protein motif:HMM:NF024308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative collagen-binding domain-containing
                     protein"
                     /protein_id="HYK46966.1"
                     /translation="WLKALMLSRPYFSRIRDESIILSDTGATYLDHIEATKDEDGSYA
                     MIYLPENKPVIIDLAKISGSKKSAWWYDVKTGRSQRIDITTNTANYTFTPPADERDCV
                     LVIDDASKNFKAPGTIMF"
BASE COUNT          441 a          387 c          340 g          522 t
ORIGIN      
        1 gatgcgcgtg aacttatctt ctttcatgcc tactgagcta accccggcac agaaaaaaca
       61 ggcgtggtaa tcttttatac tttccgaata ttcgtccagg tggaaaaaat caggtacgat
      121 caactctttc agttttggat gtgttaattc ataatgcctt cggtttatga tcagtagttc
      181 cgatactttc ggattttgaa aacattcaaa caaaacacct tcccccacca tacctgttgc
      241 acctgtgatg atcaccttaa gtgctgccat gcgttcgtgg ttttaagttg cgaagttgag
      301 cgaaaaattt taagcaacat tgatcctagt aataccttgt tgaaagtgaa attggccagc
      361 ccgccatatt atttgaactc cggtttctca cctccattat aaacaaatcg cacacgtgcg
      421 cttttttcag tggtggatgt aagaacgagc tggtagcgct ttccacctgc ggttacgacg
      481 agtattgctg tattcggcgg aatggtgcct aagttatctg ctaacatttc tatttcctgg
      541 aacgtgtttg ccaaatcaac ccgcacaaaa accgtgatcg gtttagcgcc gagtatttga
      601 tgagaaacca ccgttcttcc attgaccaat acggaaatag aatctccgtc aatttctgca
      661 ttgtcgtaaa aatcgagtcg tatctttccg gtgtccactt ctatttcggg cacttctttg
      721 aacgcagatt cttttatacg cgttaattta ataaaaccgg taccgcaatc agcacccgtc
      781 tcatttatgt aaccacccca gttgccgctc aacgtttctt catttccctt tttgctatac
      841 tgcaactcat atgtttttat gcacactcga cagatgaccg ggatcttgta agtggtgaca
      901 taggtttcct gtaacatgat cttgttgtcg gaggacattt ttagcccaac aaattttttc
      961 ttcacataat tatcgatatc ctcgtaatga taagagttgc cgtacaacga atccccgttc
     1021 accctgatct gcaattccat gttgttagta acaaaacaac cgccggacat gttcaacgtg
     1081 cccttccaga agccagctac attttgtgca atggcgattg aagagcacgc taacaataat
     1141 atcacaatgg ctgatttcac acgttaaatt tccactattc gcgccgtgaa aaaaacaaac
     1201 ctgtatgaat ggtttgttat aaattgattt gatatgcaaa ttgctgacac acgggcgcgc
     1261 aagactggtt ctgcgaggtc ttcaaataga cgatggtgtg agagaaaagg atagaccttc
     1321 gttcgtcaga acattattgt tcccggtgct ttgaaatttt ttgaagcgtc atcgatcacc
     1381 aatacgcaat ctctttcatc agccggtggt gtaaaggtgt agtttgcggt gttcgttgta
     1441 atgtctattc tctgcgatcg cccggttttg acatcatacc accacgcgct tttcttactc
     1501 ccggaaattt ttgcaagatc aatgataaca ggtttgttct ctggcaggta gatcatcgca
     1561 taagatccgt cctcatcttt cgttgcttct atatggtcca ggtatgtggc acccgtgtca
     1621 ctgagaatga tgctttcatc gcgtattcgt gagaaatacg gacgagacaa catgagggct
     1681 ttcagccact
//
LOCUS       DASQJI010000643         7931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_84580,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000643 DASQJI010000000
VERSION     DASQJI010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7931
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84580"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2522)
                     /locus_tag="VEV83_17440"
     CDS             complement(<1..2522)
                     /locus_tag="VEV83_17440"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYK46967.1"
                     /translation="MKRLLFPLFLLITVAAHTQLLSWTPAFIQENSTPVTITMDANFG
                     NRALLNYATTSDVYVHIGAITNLSSSAADWKYVKFTWGTTNASAHCTYLGNNKWQYTI
                     TGGLRNFFGISNGSETIREIAILFRNGTGSIVQRNANGADMYVPVYDNGVHARIDVPY
                     QQPLYDPVPEPIVKNFGDPLSITAKSSVANTLKIFFNGNLLTTSSTTTATANTMITTY
                     GNQRIIAEATDGITTSRDTVDFFVSYTLSGLHDGINYEPGDTSVTLVLYAPHKKKVVV
                     VGDFNNWTQSDSYKMNVTPDSARYTLRITHLTKGTEYAYQYVIDDTLKVADYNTEKIL
                     DPVFDPAIPSTTYPNLKPYPTGKTTGIVSILQTAKPQYAWQVTNFLRPDKRNLIIYEL
                     LVRDFIAAQNWQTLKDTLTYLKRLGVNAIEVMPFNEFEGNNSWGYNPDFYFAPDKFYG
                     TEMALKQFIDECHKQGFAVIMDMVLNHSFGQSPMVQMYWDKAKNVPAANSPWFNQYPT
                     HAFNVGYQFNHEAPATKDFTYRVINFWLTNYHLDGYRYDLAKGFTQRRTCDAFGNNCD
                     VNAWGQYDDGRVAIWDSIYDQQQRISPNSYCILEMFADNSEETVESDRGMMLWGNMNY
                     NYNQATMGYITGSDLSWGIYKARGWSQPHLITYQESHDEERLMYRNEQFGNFNGSYNV
                     KDTATGLSRNGMAAAFWAMQPGPKMMWEFGELGYDLSINRCTNGTVDNNCRLDPKPPR
                     WDYYNKPNRKALFDIYSNLIHLRTYPDFPGTFTTGATSYSLVGALKWESISGANLQVM
                     VFGNFDVVQQNATITFPSSGKWYNYLTTGTLNLASTSYNVTL"
     gene            2715..4373
                     /locus_tag="VEV83_17445"
     CDS             2715..4373
                     /locus_tag="VEV83_17445"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HYK46968.1"
                     /translation="MKQICVTALALMAFTCSYTQQTADRIYINAKIWTGNTADPSAST
                     IAVKGNKILFVGDDYSKYRSANTVIIDEQGKMIVPGFTDNHTHFLSGGYQLASVNLRY
                     ARSPAEFITTLKQYVASLHDNRWIQGGDWDHENWDGELPRKGWIDSVSADHPVFVNRY
                     DGHMALANSVALKQARINKDTPNPPGGEIVKDKATGEPTGVLKDEAMNLMYAVIPEPS
                     AAELDEYLQRAIQEAFSHGVTQVNDMSSYGGWPDMATYRRAYADHRLDLRIYSFVPIA
                     TWSRLDSFIKKNGRGDEMLHWGGLKGFVDGSLGSTTAWFYKPYLDAPNTTGLQVTDTN
                     LLRKWIIEADSAGLHVTVHAIGDKANDFLLNVYEEAQKVNGNRDRRFRIEHAQHLTQH
                     AIPRFAQLHVIPSMQPYHAIDDGKWAAKRLDSARLKGTYAFSSLLATNANLTFGSDWT
                     VAPLDPIAGIYAAVTRRTLDDKNPNGWFAEQKISVDEALRCYTVNNAYASFMEHKTGV
                     LKAGMLADFVVLSDDIFSVPPEKIRDIQVLLTVVNGKEVYALKN"
     gene            4436..4810
                     /locus_tag="VEV83_17450"
     CDS             4436..4810
                     /locus_tag="VEV83_17450"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK46969.1"
                     /translation="MKQAVTVFTALFIYVVACGQTLYTIDNNRIPGNALATQIAPGTK
                     INVIQNPVRGAINFQITNPLSTKYEISLYSPNGQKITSILYEHPAGTSLKTMYVPDGV
                     KGIYYLVVRSESEKRTAKILVE"
     gene            4916..6190
                     /locus_tag="VEV83_17455"
     CDS             4916..6190
                     /locus_tag="VEV83_17455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46970.1"
                     /translation="MSVLIFVVYFVLVSFLITKIPFFKKSGLSTYWLIGLFSLKIAAG
                     IAYGLFYSQPQYAEGSDTWRFFEASRTETDWLLRDPLAFFKDLFFYGYKESGSLFLAN
                     DSYWNDLKSNLVIKLMAAFNALTLKNYYADIIFFNFLFLFGPVALYRVAREKVNPHNI
                     ILVLFVFCIPSFLFWCSGMHKDGLIFTAVSLIAFYFDRWLTKKSFSLTGILVSLVSIC
                     LLFAFRNFVLLLLLPALLTWWLCERMPARKTLAVVEVYILCLALFFAARHVNPALDFP
                     RYVVSKQNEFKALGGHSQIMLPALEPSFGGFLKFFPAAADIAFLRPHVTETANLAYLP
                     AIGENIVVYLLLLYALFRFFFNRSEKFSASAASFVIFCYCFAITNLILSGYTVTLTGA
                     IVRYRSFVLPLLLVPLSNLIHIKKKRHNLNRA"
     gene            6325..>7931
                     /locus_tag="VEV83_17460"
     CDS             6325..>7931
                     /locus_tag="VEV83_17460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HYK46971.1"
                     /translation="MSLRFQAVSNLAGDAGHMKVQGPSKITAIFCENVFTLKTARKFL
                     SDEAYKSLTASIKESKKIDRTVANQIAAGIRSWAEAKGVTHFTHWFQPLTGTTAEKHD
                     SFFTIKSDGTAIEEFDGGALIQQEPDASSFPSGGLRATFEARGYTAWDPSSPAFIVEI
                     GDGKTLCIPTIFVSYTGESLDYKAPLLKALEAMNKAAVDVCNFFDKNVSRVSATLGWE
                     QEYFVIDEGLANARPDLVLTGRTVYGAAPAKGQQLEDHYFGSIPERVYAFMRDFEEEG
                     YKLGIPMRTRHNEVAPSQFECAPIFEDVNLAVDHNILMMDIMDRVARRHNLRVLLHEK
                     PFAGINGNGKHNNWSMATDTGINLLAPGKTPKTNLMFLTFFVNTIKAVHDYSDVLRAA
                     IASAPNDHRLGANEAPPAIISVFIGEYLTRVLNDIETRVGDKFDEQDEAILKLDLHRS
                     IPELLLDNTDRNRTSPFAFTGNKFEFRAVGSSANCANAMIALNTIMAETLKTFKKDVD
                     ALIDKGDKKEIAIMHVIQKYITESKKIL"
BASE COUNT         2135 a         1806 c         1776 g         2214 t
ORIGIN      
        1 tggagcgtaa cgttgtacga tgttgaagcg agattcaatg tgcccgtcgt taaatagttg
       61 taccatttac cgcttgaagg aaaagtgatc gttgcgtttt gctgaacaac atcaaaattc
      121 ccaaacacca tcacctgtaa attggcacca cttattgatt cccacttaag ggctccgaca
      181 agactgtacg aagtcgcccc cgtagtaaag gtccctggaa aatccgggta tgttctcagg
      241 tggatcaggt ttgagtaaat atcaaacaac gcctttcggt tcggcttgtt ataataatcc
      301 caacggggcg gctttggatc taaacggcaa ttgttatcga cggttccgtt cgtgcaacga
      361 ttgatagaga gatcgtaacc cagttcacca aactcccaca tcattttggg ccctggttgc
      421 atggcccaga acgcagccgc catcccgttg cgtgacaagc ctgttgcggt gtctttgaca
      481 ttgtaactgc cgttaaaatt tccaaactgc tcattccggt acattagcct ttcctcatca
      541 tggctttcct ggtatgttat taaatgaggc tgcgaccagc cacgggcttt ataaattccc
      601 cagctcaggt cagacccggt aatataaccc attgtcgcct ggttgtagtt gtagttcata
      661 ttcccccata gcatcatccc acgatccgat tcaacagtct cctcactgtt gtcagcaaac
      721 atctcaagaa tacaataact gtttggcgat atccgctgtt gctgatcata aatggaatcc
      781 cagatcgcaa cgcggccatc atcgtattgt ccccacgcat ttacatcgca attgtttcca
      841 aacgcgtcac aggttctgcg ttgtgtaaat ccttttgcga gatcatatct ataaccgtcg
      901 agatgatagt tcgtcaacca gaaatttatg acgcggtacg taaaatcttt tgtggccggc
      961 gcctcatggt tgaactggta accgacattg aatgcgtgcg ttggatactg gttgaaccac
     1021 ggactgtttg ctgcaggaac atttttcgcc ttatcccaat acatctgcac catcggcgat
     1081 tggccaaagg aatgattgag caccatgtcc atgataacgg caaatccctg cttgtggcat
     1141 tcgtcaatga attgtttcaa ggccatttcc gttccataaa atttatccgg ggcgaaatag
     1201 aaatcaggat tataacccca gctgttgttt ccttcaaatt cgttgaacgg cattacttca
     1261 attgcattta cgccgagacg tttcaaatac gtcaacgtgt ctttcaacgt ttgccaattt
     1321 tgcgctgcaa taaaatctct taccagcaat tcataaatga taagatttcg tttgtccggg
     1381 cgtagaaagt ttgtgacctg ccaggcatat tgcggcttcg ccgtttgcaa aatgctgaca
     1441 atgcctgttg tttttcctgt aggatacggt tttagattcg ggtaggtcgt cgatgggatc
     1501 gccgggtcaa aaacaggatc aagaattttt tcggtgttgt agtctgccac tttcaaagtg
     1561 tcgtcgatta cgtattggta agcgtattca gtgccttttg taagatgagt tatccgcaac
     1621 gtgtatcgtg cgctgtcagg cgttacgttc attttataac tgtcggattg agtccagtta
     1681 ttaaaatcgc caacgaccac caccttcttt ttatgcggtg cgtacaatac aagggtcaca
     1741 gatgtatcac cgggctcgta attgatcccg tcatgtaatc ccgatagagt atatgaaacg
     1801 aaaaaatcaa ccgtgtccct gcttgtcgtt attccatctg ttgcttcggc gatgatccgc
     1861 tggttcccgt atgttgtgat catcgtattc gcagttgccg ttgttgtact ggaggtcgtt
     1921 aacaggttgc cgttgaaaaa tattttcagc gtgtttgcaa cacttgattt cgctgtgatt
     1981 gatagcggat cgccaaaatt ctttactatc ggctcaggca ccggatcata taatggttgc
     2041 tgataaggaa catcaattcg cgcatgaaca ccgttatcat acaccggcac gtacatgtcg
     2101 gctccgttcg catttcgctg aacgatggag ccggtgccat tgcgaaacag gatagcgatc
     2161 tccctgatcg tctccgatcc attactgatc ccaaaaaaat tacgcaaccc gccggtaata
     2221 gtatattgcc atttattatt tccaagatac gtacagtgcg cgcttgcatt ggttgtgccc
     2281 caggtgaact tcacatattt ccagtcggcg gccgagctac tcagattagt tatcgcgccg
     2341 atatgcacat acacgtcgga ggtggttgca tagttcaata gcgcacgatt accaaaattt
     2401 gcatccatcg ttatggtaac gggtgttgaa ttttcctgga taaaggctgg cgtccaggaa
     2461 agtaattgcg tgtgagcagc gaccgtaatg agaaggaaga gcgggaatag aagtcttttc
     2521 ataatgaaag cgatttatcg tcagcaaata tgtgtaaatt ctacacttcg aacaaaacaa
     2581 ttaaatacga gtcaccaaaa aaactgaatt caaggctttc gaaccgtctg agccaaaaga
     2641 aaaattcatt attggtttat tgataattga ttatttttct tttcgaagcc gcactataac
     2701 cacatcgcac aattatgaaa caaatctgcg taacagcatt agcactgatg gccttcactt
     2761 gctcttatac tcagcaaact gccgaccgca tctatatcaa tgccaaaata tggaccggca
     2821 atactgcgga tccgtcagcg tccacgatcg ctgtcaaagg caacaagatc ttatttgttg
     2881 gcgacgatta ttcaaaatac agatcggcaa ataccgtgat catcgatgaa caagggaaaa
     2941 tgatcgttcc aggtttcacc gataaccata cacactttct cagcggcggt tatcaacttg
     3001 cgagcgttaa tcttcggtac gcacgatcac ctgcagaatt cattacaacg cttaaacaat
     3061 atgtggcttc attacatgac aatcgatgga tacaaggcgg cgattgggac cacgaaaact
     3121 gggatggtga actgccccga aaaggttgga tcgatagtgt gagtgctgat catcccgtct
     3181 tcgtcaatcg ttatgacggg cacatggcgt tagccaattc cgttgcactg aaacaagctc
     3241 gcatcaacaa ggacacacca aacccgccgg gcggagaaat tgtaaaagac aaagccaccg
     3301 gcgaaccgac cggtgtatta aaggatgaag caatgaactt gatgtatgcg gtgattcctg
     3361 aaccgtccgc ggcagagctt gatgaatatt tgcagcgtgc aatacaggaa gctttttcac
     3421 atggagtgac gcaggttaat gacatgagca gttatggcgg ctggcctgac atggcaacct
     3481 atcgaagagc ctacgcagat catcgccttg atctgcgcat ttattccttc gtgccgatcg
     3541 caacatggag caggctcgat tcctttataa aaaagaatgg acgtggagat gaaatgctgc
     3601 attggggcgg actgaaaggt tttgtcgacg gatccttagg ctcaacgact gcatggtttt
     3661 ataaaccgta cctcgatgct ccgaacacaa caggcttaca ggttactgat acaaatttgc
     3721 tacgcaaatg gatcatagaa gctgactctg ccggtttgca cgtgacggtg catgctattg
     3781 gcgacaaggc aaatgatttt cttttgaacg tgtatgaaga agctcaaaaa gtaaatggga
     3841 atcgcgaccg ccgatttcgc attgaacatg cacaacatct gacgcaacac gccattccac
     3901 gttttgcaca attacacgtg atcccgtcga tgcagcctta tcatgcgatc gatgatggaa
     3961 aatgggcggc gaaaagatta gatagtgcga gattgaaagg aacatacgca ttcagcagtt
     4021 tattagcgac aaatgcaaat ctcacgttcg ggtccgactg gacggttgca ccgcttgatc
     4081 ccatcgcagg aatttatgca gccgtaacgc gacgaacatt agacgataaa aatccaaacg
     4141 ggtggtttgc tgaacaaaaa atttctgttg acgaagcttt acgatgttac accgtcaaca
     4201 atgcttacgc aagcttcatg gaacataaaa cgggtgtgtt aaaggctggc atgcttgctg
     4261 attttgtggt attgtcggat gatattttta gcgtccctcc ggaaaagatc cgcgatatac
     4321 aggtactgct caccgtggtc aacggcaagg aggtttatgc cctgaaaaat tagcataatc
     4381 gagtgaagtt cggcagacct tttgttttca tatttacaca gcaaaacctt aaactatgaa
     4441 acaagccgtt accgttttta ctgccctgtt tatttatgta gtagcatgtg gccaaacact
     4501 gtatacgatc gataacaaca ggataccggg caatgctctc gcgacgcaaa ttgcaccagg
     4561 tacaaaaata aacgtgatac aaaatcctgt gcgcggcgcc atcaactttc aaataacgaa
     4621 cccgcttagc actaagtatg agatctcttt gtactcaccg aatggacaaa aaataacttc
     4681 aattctgtat gaacatcctg cgggaacaag tttgaaaacg atgtatgtac cagacggtgt
     4741 aaaaggcatt tattatttag ttgtgcgaag cgagagcgaa aagcgaactg cgaaaatact
     4801 agtcgaatag tttggatgaa aatcctgcgc gccccgcgaa ttaaaacgat cgcggggttt
     4861 tcttttgcga ggtacaagtt gataattaaa attatcttgc tgcaaataca tccagttgag
     4921 tgttttaatt tttgttgttt atttcgttct ggtttcattt ctcatcacaa agatcccttt
     4981 cttcaaaaaa agcggtttaa gcacctactg gctgatcggt ttgttttcgc tgaagatagc
     5041 cgcaggcatt gcatatggtc ttttctacag ccagcctcaa tatgcggaag gaagtgatac
     5101 gtggcgtttt ttcgaagcaa gccgcacaga aacggattgg cttctccggg acccgctagc
     5161 attttttaaa gatttgttct tctacggcta taaggaaagc ggcagtttat ttcttgccaa
     5221 tgattcgtat tggaatgatc tcaaaagcaa ccttgtaata aagctgatgg ctgcatttaa
     5281 tgcgctcacc ctgaaaaact actatgctga catcatcttt ttcaatttcc ttttcttatt
     5341 tgggccggtt gctttgtatc gcgtagcccg tgaaaaggtt aatccacata atattattct
     5401 tgtgctgttt gtgttttgca ttccatcatt tctattctgg tgcagcggta tgcacaaaga
     5461 tggacttatt ttcacggccg tttccctcat cgccttttat ttcgatcgat ggcttacaaa
     5521 aaaaagtttc tcactaaccg gaatactggt atctctggtc agcatttgct tgcttttcgc
     5581 gttccgcaat ttcgtattac tgctcttgct ccctgcgcta ttaacctggt ggttgtgtga
     5641 gcgcatgcct gcaagaaaaa cattggccgt cgttgaagta tatatcttat gcctggcgct
     5701 tttttttgcg gcgcgccatg tgaatcctgc attggatttt ccccgctatg ttgtgtcgaa
     5761 acaaaacgag tttaaagctt tgggcgggca ttcgcagatc atgcttccgg cactcgaacc
     5821 ttcgtttggc ggttttctca aatttttccc tgctgctgct gatatcgctt tcctgcggcc
     5881 tcatgttaca gaaactgcaa acctcgccta cctgccggcg attggtgaaa atattgttgt
     5941 ctaccttttg ctcctatatg ctttgttcag gttttttttc aaccggtctg agaagttctc
     6001 ggcttcagcc gcttcatttg tcatcttttg ttactgcttc gcgatcacaa acctgatact
     6061 gtctgggtac acagtaacgc ttaccggagc aatcgtaaga tatcggagct tcgtcctacc
     6121 gcttctgctc gtaccactgt cgaatttaat acacattaag aaaaaacgac ataatttaaa
     6181 tagagcctga gattttcgta tttctagtca agaaccgaac ttcacgctaa cttttattca
     6241 caggcacctc gtttttttca caattggcaa taaaaattgg gagttttata aattgttgct
     6301 tacttcgcgc aaaaatttat ttctatgtct ttaagatttc aggctgtgag caatttagcc
     6361 ggcgacgccg gacatatgaa ggtccagggg ccgtcaaaaa tcacggcgat tttctgcgaa
     6421 aacgtattta cattaaaaac cgccaggaaa tttttaagtg atgaggcata caaaagcctt
     6481 accgcaagca ttaaagaatc caaaaagatc gaccgtaccg ttgcaaatca aattgcagca
     6541 ggaatccgtt cgtgggcaga ggcaaaaggc gttacgcatt ttactcactg gttccaaccc
     6601 ttaaccggca cgactgctga aaaacatgat tcatttttca ccatcaagag tgatggtact
     6661 gcaatagaag aattcgatgg tggcgctttg attcaacagg aacccgacgc gtcatctttc
     6721 ccaagtggcg gattgagagc cacctttgag gcccgcggtt acacagcatg ggatccctcc
     6781 tctcctgcgt tcatcgttga aataggcgac ggaaaaacac tttgcattcc cacgatcttt
     6841 gtctcataca cgggcgaatc tctcgattat aaagctcctt tgctcaaagc gctcgaagcg
     6901 atgaataaag cggccgttga cgtctgcaat ttttttgaca agaacgtgtc gcgcgtctca
     6961 gctacgttag gatgggaaca ggaatatttt gtaattgatg aaggacttgc gaacgctcgt
     7021 cctgatcttg ttctcacagg tcgaaccgtg tatggcgctg cccctgcaaa aggacaacag
     7081 ttggaagacc attacttcgg ctccattccg gaaagggttt atgctttcat gagagatttt
     7141 gaagaagaag gttacaagct cgggattccg atgcgcaccc ggcataatga agtggctccc
     7201 tcgcagtttg aatgtgctcc gatctttgaa gatgtgaatc tcgcggtgga tcacaatatt
     7261 ctgatgatgg acatcatgga ccgggttgca cgcaggcata atctgcgggt gttgttgcat
     7321 gaaaaacctt tcgcaggcat caatggaaac ggcaagcaca acaactggag catggcaact
     7381 gacaccggca tcaatcttct cgcgccgggc aaaacgccaa agacaaacct gatgttcctt
     7441 actttttttg tgaacacgat caaagcggtt catgattact ctgatgtgtt gcgtgccgcg
     7501 atcgcatctg cgccaaacga tcatcgcctc ggtgcaaacg aggctccgcc ggcgatcatc
     7561 tcggttttca tcggcgaata cctcacgcgt gttttgaatg atattgaaac aagagttggc
     7621 gataagttcg atgagcagga cgaagcaata ttgaaattag atcttcatcg cagcataccg
     7681 gaactcttgc tcgataatac cgatcgtaac cgcacgtcgc cattcgcatt caccgggaac
     7741 aaattcgagt tccgcgccgt cggttcgtct gctaattgtg ctaacgcaat gatcgcgttg
     7801 aataccatca tggcagaaac gctgaagaca tttaagaaag atgtggacgc gcttattgac
     7861 aagggcgata aaaaggaaat tgctatcatg catgtgatac agaagtacat cacagaaagc
     7921 aagaagatcc t
//
LOCUS       DASQJI010000644         3240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_698622,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000644 DASQJI010000000
VERSION     DASQJI010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698622"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..1847
                     /locus_tag="VEV83_17465"
     CDS             156..1847
                     /locus_tag="VEV83_17465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HYK46972.1"
                     /translation="MMKNTFLLLLALFFMFSANTQTILWTKNFNGSANANDAITAMAT
                     DANGSVYVTGFADNGARGTDYVTIKYNTNGTRVWRATYDGPGKGNDAAKAIAVDNAGN
                     VYVTGKSDDLPDAFVDDDAATIKYNSDGKLMWVSRYHGKAERGDEGRAIKVDQSGYVY
                     IAGYTSERSGAHSDFNYLTVKYSPTGNQEWKAIYAGTTEAPNDQNDSANAISVDAKGN
                     VYVTGMSNGAGGLENLNQDFLTIKYNALGVQQWTARYNGPGDQIDEAFALMTDVHGNA
                     FVTGLSTGSGNKSYDFATIKYNTNGVLQWVRRHDGPAPFSEDFGFAMAMDDSENIYVT
                     GTDHATLDNEDIYTIKYNSSGVQQWSTRYDGGDNDDPLSLTLDTNGNVYVAGYTISPQ
                     TYADGILIKYNRDGIQQWMQQFRGTQKYGWDQWTAATVDSQNNVYVAGYTTDKDSGTD
                     YAIAKYSETSLISNVVVQAQQDSTSISVSNIPNPFSAQTRILFHIYMKGKNEADVKLW
                     IENMRGSKLNMLVNKKLCGGEYDVLWNAENLEPGIYYCKLLCNDVLTVRKMSLIR"
     gene            complement(1953..2396)
                     /locus_tag="VEV83_17470"
     CDS             complement(1953..2396)
                     /locus_tag="VEV83_17470"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK46973.1"
                     /translation="MLNTILADLYERDLRNLIEEVNLFKNEENLWRTQGSVKNSCGTL
                     VLHITGGLNHFFGATLAHTGYVRDRDQEFSKKGVKREELVAQLEQVIPMMNETLSALT
                     TEQMGAAFPIFFDKPNTSVAYVAVRLLAHLGYHLGQVNYLRRVLE"
     gene            2572..3015
                     /locus_tag="VEV83_17475"
     CDS             2572..3015
                     /locus_tag="VEV83_17475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HYK46974.1"
                     /translation="MNEKLTDIIFYTLEKSIKTYRQFAQKRIAEKGYNVTIDQWLVLK
                     ILHDNEGITQQQLAEIVFKDYASVTRIIELLVNKKYIQRDFHSRDRRRFALTLSAEGK
                     KLLTKIRHDIDENRSKALKGISKSETEAARRTLNKIISNCTNNNK"
     gene            3012..>3240
                     /locus_tag="VEV83_17480"
     CDS             3012..>3240
                     /locus_tag="VEV83_17480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46975.1"
                     /translation="MTTRIFLLAGISFLFLNECVFSQMSSNLSLDHQLKQKVIDGVSK
                     ELLSNYVFEDTAHKMATFLETRLQNGSYDSIF"
BASE COUNT         1009 a          670 c          725 g          836 t
ORIGIN      
        1 gtttcgcagg tatccaacct tcccggtatg atggtatcat atcgatttca gtacgccttt
       61 ttccggtttt agcacaacaa attcatgctt gccgaatttc ccttctttcg atgcaaccat
      121 tctgtagaag agccagttta atacttaaac actaaatgat gaaaaataca tttctactcc
      181 tgctcgcttt attttttatg ttttctgcta acacacagac aattttatgg acaaaaaact
      241 ttaatggaag tgctaatgcg aatgatgcta taactgctat ggcaaccgat gcaaacggca
      301 gtgtgtatgt tactggtttt gccgacaacg gagcgagagg aacagactac gtaacgatca
      361 aatacaacac gaatggaaca cgtgtttgga gagccacgta cgacgggcct ggaaaaggta
      421 acgacgccgc caaagctatc gccgtcgaca acgcaggcaa cgtttatgtt acaggaaaaa
      481 gtgatgattt gcctgacgct tttgttgatg acgatgctgc gacgataaaa tacaattcag
      541 atggtaaact tatgtgggta tcgcgatacc atgggaaagc agaacgcggt gatgaaggtc
      601 gggcgattaa agttgaccaa tcaggttatg tttacatagc cggttatacc agcgaaagaa
      661 gcggcgcaca ttccgatttt aattatctaa ccgtcaaata cagccctacc ggaaaccagg
      721 aatggaaggc aatttatgcc ggaactacgg aggctccaaa tgatcaaaat gattctgcaa
      781 atgcaatctc agttgatgcg aaaggaaacg tgtatgttac aggtatgagc aatggcgccg
      841 gcggcctcga aaatctgaac caggactttc ttaccataaa atacaacgca ctcggagtgc
      901 aacagtggac ggcaagatac aatggtcccg gtgatcaaat tgatgaagca tttgcactga
      961 tgaccgacgt tcacggcaat gcatttgtca cgggtttgag cactggctca ggaaacaaaa
     1021 gctacgactt cgcaacaata aaatacaata cgaacggcgt tttgcaatgg gtgcgacgac
     1081 acgatgggcc cgccccgttc tccgaagatt ttggttttgc gatggcgatg gatgatagtg
     1141 agaatatcta cgttacggga acagaccacg caactttaga taatgaagat atctacacga
     1201 tcaagtacaa tagctccggc gtgcagcaat ggtccacgcg ttatgacgga ggcgataatg
     1261 acgatcccct ttctttgacg cttgatacga acgggaacgt ctatgttgca ggttatacaa
     1321 taagtccgca gacgtatgca gacgggatac tgatcaaata taacagggac gggatacaac
     1381 aatggatgca gcaattcaga ggcacgcaaa agtatgggtg ggatcaatgg actgcagcga
     1441 ccgtggattc acagaacaat gtatatgttg ccgggtacac cactgataaa gattctggaa
     1501 ccgattatgc gattgcaaag tattccgaga ctagcctgat cagtaatgtc gtcgtgcaag
     1561 cgcagcaaga tagcacgtct atttcagtgt cgaatattcc caatcctttt tcggcgcaaa
     1621 caagaatact gtttcatatt tatatgaaag ggaagaatga ggcggatgta aaactatgga
     1681 tagagaacat gcggggaagt aagttaaata tgttagtgaa caagaaatta tgcggcggtg
     1741 aatacgatgt gttatggaac gcagagaatc ttgaaccagg tatatattac tgcaaattac
     1801 tttgtaatga tgtgcttaca gttagaaaaa tgtcgctgat tagatagatt ttgcgttccc
     1861 taaaccctca acgggaatat ggcaaatttg cgaaccctaa aagaggcgtt ggcggtccac
     1921 atggttcgtt gtgagtatta gactccatgc cctcattcca aaacgcgcct caaataattt
     1981 acctgcccca ggtgatagcc aaggtgagcc aacaatcgta ccgccacata agcgaccgac
     2041 gtattaggct tgtcgaagaa tattggaaat gcagcgccca tctgttctgt tgtcaaagca
     2101 ctcaacgttt cgttcatcat cggaataact tgttccagtt gcgccacgag ctcttccctt
     2161 ttcacacctt tcttactaaa ttcctggtcg cggtcgcgaa catatccagt gtgggcaagc
     2221 gtagctccaa aaaaatgatt caggcctccg gtaatatgca ataccagagt accgcatgag
     2281 ttcttcaccg agccctgcgt tcgccaaaga ttttcttcat tcttaaataa gttgacctct
     2341 tcgatcaggt tacgcaggtc gcgctcatag agatctgcta atatggtatt caacataaca
     2401 atactgttta gtgaataaaa ttaattgatc tggcgttcag aattgtttcg cacacacccg
     2461 tccgcaggcc tctcatcatc gatatcttcc ttttgcaaaa accatatcgg tgggaataaa
     2521 catgtaccag atatttgata tatcaattat atgcttatca aatatcagaa tatgaatgaa
     2581 aaattaaccg atataatatt ttacacgctt gaaaaatcta taaaaacata caggcagttc
     2641 gcacagaaga gaattgccga aaaaggttat aacgtaacga tcgaccagtg gttggtgctg
     2701 aaaatactgc acgacaatga aggcatcacg caacagcagc tggctgaaat tgtgttcaag
     2761 gactacgctt cggtcacgag gatcattgaa cttcttgtga acaaaaaata tatccagcgt
     2821 gattttcatt caagggacag gcgaagattt gcattaacgc ttagcgcgga gggcaaaaaa
     2881 ttgctgacga agatccggca tgatattgat gagaaccgaa gtaaagcttt gaaaggtatt
     2941 tcgaaatcag aaaccgaagc cgccaggagg actttgaaca agatcatttc aaactgtaca
     3001 aataataaca aatgacgacg agaatctttt tattagcagg catttctttc ttgtttttga
     3061 atgaatgtgt attttctcaa atgagcagta atcttagcct ggatcaccaa ctgaaacaga
     3121 aagttattga cggtgtttcc aaagaactgc tgagcaatta tgtttttgaa gacaccgcac
     3181 ataaaatggc cacgttttta gaaacgcgct tacaaaacgg ttcctacgac agcattttcg
//
LOCUS       DASQJI010000645         3386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3003128,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000645 DASQJI010000000
VERSION     DASQJI010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3003128"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VEV83_17485"
     CDS             <1..435
                     /locus_tag="VEV83_17485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46976.1"
                     /translation="KPEVDVSESKTADVSQPNVETSKSQNTNAVNLPTADAASMNEHG
                     YFADQFEAPKKKRLHSTSGMCKTFKTASGWNDGKYYILANDIDPGTIVRVTADNGKSV
                     YAKVLWNMGGLKENAGLDFRISNAAAAALQENDTSFNLHVAY"
     gene            625..897
                     /locus_tag="VEV83_17490"
     CDS             625..897
                     /locus_tag="VEV83_17490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46977.1"
                     /translation="MKLLSKLASIKAFVTILILTLIQTFVFGQDSGGGSSTVTTTTHT
                     ETQTWYAQPWVWIVGAAVFILLLIALVRGGSDRVSVTKTTTTETDI"
     gene            1049..2776
                     /locus_tag="VEV83_17495"
     CDS             1049..2776
                     /locus_tag="VEV83_17495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46978.1"
                     /translation="MKRIYYIIAIAIVVILLSAYLFTRFSFLKTKDPKPAVSKSESPL
                     DLRPLIIEKLQELVKQGSDGLYNLSIQDLQPDILNSTLNITNATFITDSAALKKLDSL
                     KKAPDDLFNFSFQHLRITGINIDDIVHRDRIDVDSIFITRPVIRVYHDPRPYNQRQRE
                     RDSSLTLYKKLQTGLKHMAIKNIAIEAGSLIHTNAAQDNRVQRFNDISLHVHDLLFDS
                     TTEYDKSRFLFSKEVLLSCKNYLARTPDSLYLFKVASISVDAVRHTMTGRQVALLPRK
                     NFEKKVKYMENRFKIQFPKVVFNNIDWWALINNESFTSENADLYDVHAENFVDRSKPL
                     NPNMRQDNFPHQLLMRVPMNVNIAKLSVHNASIAYEEYEPEIARSAKVSFDNINGVLR
                     NVTNISSSIQKNGFASFDGSSLFMHSVPLSAHFKFNLAKPKTGDFSVSMQMGTLNRTI
                     VNSFAEPMGMFSFKSGELQHASGSAQGNNTSSTANMELLYKDLHITPLKRDKDDTTSL
                     KKKTVTSFIANAFFIKDANPSKGEDVRRPTVTIQRDHYDGFFRFVWKSMLAGILKTIG
                     VPQKYMKQS"
     gene            2976..>3386
                     /locus_tag="VEV83_17500"
     CDS             2976..>3386
                     /locus_tag="VEV83_17500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HYK46979.1"
                     /translation="MRNTLLIAFLLVYIPLTAQKKNSAYQLHIHRTHSEINIDGAMDD
                     SAWQGAESASNFFMVLPMDTSHAQVPTEVKMSYDENNLYIIAICYLATPHPYMVESLR
                     RDFVFGKNDNFIFFIDPFDDRTNGFTFGANAAGAQ"
BASE COUNT          999 a          731 c          735 g          921 t
ORIGIN      
        1 aagccggaag ttgacgtgag tgaaagcaag actgccgacg tgagccagcc gaatgtggaa
       61 acttcaaaat cacaaaatac aaacgcagtt aatctcccaa ctgctgacgc agcgtcaatg
      121 aatgaacatg gctatttcgc agatcaattt gaagcgccaa agaaaaagcg ccttcacagc
      181 acatcgggca tgtgcaaaac tttcaaaaca gccagcgggt ggaatgacgg aaagtattac
      241 atcctggcga atgacattga tcccggaacc atcgtcagag tcactgccga caatggaaag
      301 agcgtttatg ctaaggtgtt gtggaacatg gggggcctca aagaaaatgc aggtcttgat
      361 ttcaggatca gcaatgcggc ggcggcggcg ctgcaggaaa acgacacgag tttcaatctc
      421 catgttgctt actaaacatc actgaacgga atttttgggc aagtttttat acgaatttgc
      481 cttcataaaa gcaatttcca cgcatttcgt ttttagccgc atgccgtttg gcataaaaat
      541 caaaacgaaa tgtcgttggc ttagttgttg aatgataacg atcggggttg cattcctcat
      601 attcaatcac taaaaaatgc ttttatgaaa ctgttatcga aattggccag tattaaagcc
      661 tttgtaacta ttttgatttt aaccttaatc caaactttcg ttttcgggca agacagcggt
      721 ggtggaagct cgaccgttac aactacaacg catacagaaa ctcagacctg gtacgcccag
      781 ccgtgggtat ggatagtggg tgctgcggtt tttattttgt tgctcatcgc gctggtgcgg
      841 ggcggcagtg atcgtgtaag tgtaacgaaa accaccacga cagaaacaga tatataaaag
      901 gttttaccat cgtaaagaat aatagctgcg aattttcgtg gctattattt tatgaagtcg
      961 ttttgagatt tttaccggcg tgataattgg attgacgctg cggcggctgc cctgtgccat
     1021 gcatttacgg cacagcaaca cctgatacat gaagcgcatt tattacatca tcgcgattgc
     1081 aattgtcgtt attcttttat cggcatattt gtttacgcgt ttctcctttc ttaagaccaa
     1141 agacccaaaa ccggctgttt caaaatccga atctcccctc gacctccgcc ctttgatcat
     1201 tgagaaattg caggagttgg tgaagcaggg gtctgatggc ctttataatt tgtcaatcca
     1261 ggatcttcag cctgatatac ttaattccac cctgaacatt accaacgcaa catttataac
     1321 tgattcggcc gcattgaaaa agttagacag cttaaaaaaa gcaccggatg acctttttaa
     1381 tttttctttt cagcatctgc ggatcacggg cattaatatc gacgacattg ttcacaggga
     1441 ccggattgat gtagacagca tttttattac gaggccggtg attcgggtgt atcatgatcc
     1501 gaggccttat aaccagcggc aacgcgagcg cgacagttcg ctgacgttat acaaaaaact
     1561 gcaaaccggc cttaaacaca tggccataaa aaatattgca atcgaagccg gctcattgat
     1621 acataccaat gcggcccagg ataatagggt tcaaagattt aacgacatca gcctgcatgt
     1681 ccacgacctg ctttttgatt caacaacgga gtatgataaa agcaggtttt tattttcaaa
     1741 agaggttttg ttatcctgca agaattatct cgcaaggacg cccgacagcc tctatctttt
     1801 taaagtagcg tccatttcgg ttgatgccgt gaggcatacg atgaccggca ggcaagtggc
     1861 tcttcttccg cgaaaaaatt ttgaaaagaa ggtgaagtac atggagaacc gtttcaaaat
     1921 acaatttcca aaagtggtct tcaacaatat cgattggtgg gcattgatca acaacgagag
     1981 ttttacaagt gaaaatgcgg acctatatga cgtgcacgcg gagaacttcg tcgaccgctc
     2041 aaagccgttg aacccaaaca tgcgacagga taatttcccg caccaattgt tgatgcgggt
     2101 cccgatgaac gttaatatcg caaaattatc tgttcacaat gccagcatag cttatgaaga
     2161 atacgagccg gagattgcac gcagcgctaa agtgtctttt gacaacatca acggcgtact
     2221 ccgaaatgtg acgaacattt cttcttcaat tcagaaaaat ggttttgctt cttttgatgg
     2281 ctcttcttta tttatgcatt cggttcctct ttccgctcat ttcaaattca accttgcaaa
     2341 accgaagacc ggagattttt cagtcagcat gcaaatgggg actttgaatc gcacgatcgt
     2401 aaattcattt gcagaaccaa tgggcatgtt cagttttaaa agtggtgaac ttcaacatgc
     2461 gtccggatct gcacaaggaa ataatacatc gtccacggcg aatatggagt tactctataa
     2521 agatctgcac ataacgccgt tgaaaagaga taaagatgac acgacaagct taaaaaagaa
     2581 aacggttacc agttttatcg cgaatgcgtt ttttattaaa gatgcaaatc catcaaaagg
     2641 cgaggacgta cgaaggccaa ccgtaactat ccagcgggat cattatgacg gattcttcag
     2701 gtttgtttgg aaaagcatgc tggctggtat tttaaaaacg atcggcgtac cgcagaaata
     2761 tatgaagcaa agttagttca tgtgcaactt tcggcggcgt gatccacaga agtcaccgcc
     2821 cgcatgatcg attgttgatg gatttatttc cacctgtcat ccagctctct ttcgattaca
     2881 agaaccatca ataaaaaata tcgtgctgta agtttcacac tatttattta atctctctaa
     2941 attgtaaccg tatgtccgca taaaaataac cgttgttgag aaatacatta ttgatagcct
     3001 ttttgcttgt atacattccg ctaacggcac aaaaaaagaa tagcgcatac caactccaca
     3061 ttcatcgaac gcactcggaa ataaacatcg atggtgcaat ggatgatagt gcctggcagg
     3121 gtgcggagtc agccagtaat ttttttatgg tattgccgat ggatacaagc catgcgcaag
     3181 tgcctactga agtaaaaatg agctatgacg aaaacaatct ttacatcatc gcgatctgtt
     3241 acctggctac gccccatcct tacatggttg aatcgctgcg tcgtgatttt gtattcggta
     3301 agaatgacaa tttcattttt tttatcgacc cttttgacga tcgtacaaac ggcttcacgt
     3361 tcggcgccaa tgcagccggc gcacag
//
LOCUS       DASQJI010000646         3304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1159644,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000646 DASQJI010000000
VERSION     DASQJI010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159644"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1881)
                     /locus_tag="VEV83_17505"
     CDS             complement(<1..1881)
                     /locus_tag="VEV83_17505"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK46980.1"
                     /translation="MRKISVLMFCCVLGSGYVYAQTNTFPSTGAAGIGTTTPNASSLL
                     EIKSTTKGILIPRMSKIKRDSIASPATGLLIFQTNSTPGFYYYNGTAWTAVSSNGTNK
                     SLSNLSAPTAVNVDLLPGSNNSIDLGSAGLNWRDVYVAGSYYIGSTKVLTLPGTNNTF
                     IGATGNTANTGTNNTALGNQALRFNTSGGYNTATGTFAMFSNTTANNNTASGYGSLYT
                     NTSGSNNTATGAFSLAYNSSGSGNTAIGFSALNANTIGTSNTASGNNALHNNTEGFNN
                     TADGADALSGNTTGYLNTATGTTALNANTTGFYNTANGGNALKSNVGGVGNTATGAFT
                     LYANTSGAYNSAHGSSALANNTTGIDNTADGVNALATNTTGNYNTAIGYGALQTNSTS
                     NHNVGVGYYADVSVDGLTNATAIGDGASVNASNKIRLGNGAVSVIEGNAVYTVSDGRF
                     KENITDDVKGLAFINELRPVVYNFEARKFDEFVHKNNAATFEKISPHLDYSEAEHSRK
                     SGFIAQEVEKAAKKTGYDFDGVHIPQNDGDNYSLAYAEFVVPLVKAVQELSAKNDQLN
                     LKVQQFENLKTENDQLKARLDLIEQKLGLTSGTGNSTGVTLDKATLEQNVPNPFNHPT
                     TIG"
     gene            2170..2778
                     /locus_tag="VEV83_17510"
     CDS             2170..2778
                     /locus_tag="VEV83_17510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46981.1"
                     /translation="MKSRYYLPTTLLALIVLFSACQKTANAPQVQTFSEDDALTNATS
                     TLIYKFSFETKDHDTSFKGWTGTLSHSFSKDVPPNGGLWSLQLYPGWLPRQNNAEHFL
                     KLDTGKYRLRFSCYTKVQSNSINSGIGYIRLIKQSISTTTNNSRKTLAETSFSNHDWQ
                     LNQVTASTTIKPGDVIIIQVSAGASELVTWSTLFDKVKVEKL"
BASE COUNT          886 a          727 c          705 g          986 t
ORIGIN      
        1 accgatagtc gttggatgat taaacgggtt aggaacgttt tgttccagcg ttgctttatc
       61 gagcgtgact cctgtagaat ttccagtgcc acttgttaaa ccaagttttt gttcaatcaa
      121 gtcaagtctc gcctttaatt ggtcgttctc cgttttcaaa ttttcaaatt gctgaacctt
      181 taaattaagc tgatcatttt ttgcggataa ttcctgcaca gctttgacga gcggcacaac
      241 aaattccgcg taggctaaac tgtagttgtc tccatcattt tgcggtatgt ggacaccatc
      301 aaaatcataa ccggtttttt tcgcggcttt ctctacctcc tgcgcaataa aaccactctt
      361 tctgctgtgc tctgcttctg aataatcaag atgcggtgaa attttttcaa acgtcgccgc
      421 attattttta tgaacgaact cgtcaaactt tcttgcttcg aaattgtaca ccacaggacg
      481 cagctcattg atgaacgcaa gacctttcac gtcatcggta atgttttctt tgaatcgtcc
      541 atcagaaacg gtgtatacag cattcccttc aattactgat acagccccgt ttccaagcct
      601 gatcttattg cttgcattca cagaagcgcc gtcgccgatg gcagttgcat tcgtgagacc
      661 gtccactgag acgtcggcat aataaccgac tccaacatta tgattggagg tactgtttgt
      721 ctgcaatgcg ccgtacccta tcgcagtgtt atagttgccg gtggtatttg tagcaagagc
      781 atttacacca tcagccgtat tatcaattcc ggtagtattg ttggcaagag cagaagaccc
      841 gtgcgcgctg ttgtaagcgc cgctggtgtt agcgtaaagg gtaaaggctc cggttgctgt
      901 attgcccaca ccgcccacgt tcgacttaag cgcatttccg ccgttcgcag tattataaaa
      961 acctgtcgta tttgcattca gtgcggtagt ccccgtggcc gtgttgagat acccggttgt
     1021 gttgcctgac agcgcatcgg ctccatcagc ggtgttgtta aatccttccg tattgttatg
     1081 aagcgcattg ttcccgctgg cagtgttaga agttcctata gtattggcat taagcgccga
     1141 gaaaccaatt gcggtgttgc cagaccccga actgttatac gcaagggaaa aagctcctgt
     1201 tgcggtattg ttcgaaccgc ttgtattcgt ataaagagag ccatacccgc tggcggtatt
     1261 gttgtttgca gtggtgttgg aaaacatagc gaaagtaccg gtagcagtat tgtaaccacc
     1321 ggatgtatta aaacggagtg cctggttacc aagtgccgta ttatttgttc cggtgttggc
     1381 tgtgttgccc gttgcaccga taaaagtatt gtttgttcct ggtagcgtga ggactttagt
     1441 agaaccgatg tagtaactgc ctgcaacgta cacatctctc cagttcaatc ccgccgagcc
     1501 gaggtcaatt gaattattac ttcccggcag gaggtcaaca ttcactgcgg ttggagcgct
     1561 gagattgctc aaacttttat tagttccgtt tgaagagacc gcggtccatg cagttccgtt
     1621 ataataatag aatcccggcg tgctattggt ttgaaagatc agtaatcctg tagccggcga
     1681 agcaattgaa tcgcgtttta tttttgacat gcgcgggatc aaaattcctt tcgtcgttga
     1741 ttttatttcc aacagggacg aagcattagg tgttgttgtg ccaatgcctg cagcaccggt
     1801 cgatggaaaa gtatttgttt gcgcataaac atagccgcta cccagcacgc agcagaacat
     1861 aaggacggaa atctttctca taatcgtagg ttttttgaac gtgaaattta tttacaagat
     1921 cttacaaaca agatccaatt gacatccatg tttctctcaa aactttctta gggtaaatga
     1981 aacgagattc tgtttgatcc aatcagttga taaaaattcc ggcggttcct ataaagatat
     2041 gcaatacaat agatcgctgc cagttttgca cagtaacttt cgttctataa tgattgtatg
     2101 ctgttattcg aaaatcagcg gtcaatgcaa cgtttcatat atttctgtag ccaaaagaaa
     2161 aaagaagtta tgaaatctcg ttattatttg cccactaccc tgcttgcttt gatagtatta
     2221 ttttcagcgt gtcaaaaaac agccaatgcg ccacaagtgc aaaccttctc agaggatgat
     2281 gcgttgacca acgcaacaag cacattaatt tacaaattca gttttgaaac aaaagatcac
     2341 gacacaagct tcaaaggatg gacgggaact ttgtctcaca gtttttcgaa agatgtaccg
     2401 cccaacggtg gcctgtggtc tttacagtta tacccgggat ggctgccgcg gcaaaataac
     2461 gcggaacatt ttttaaaatt agatacaggt aaataccggt tacgttttag ctgctatacg
     2521 aaagttcaaa gtaattcaat aaacagcggc atcgggtata ttcgtttgat caaacaaagc
     2581 atatcaacaa ccacaaataa ttcccggaaa acacttgcgg aaacatcttt ttcaaatcat
     2641 gattggcagc ttaaccaggt aactgcatca acaactatca aacccggcga tgtaataata
     2701 atccaggttt ctgcgggtgc atcagaactt gtaacgtggt caacgttgtt tgataaggtg
     2761 aaagttgaaa aactttagcg cgagtctttg cataacaaag atctgccggt taaatttccc
     2821 gggagatgtt ttgttcatca tacgacactt caataaaaga gaaacgttag cagtaaaaaa
     2881 ggtcagacac ttcgtcaacg tgtcttttct ggattgcctg cattttattt gccaacatca
     2941 tcccgaaacg atcgatgttt ttatttgatg tgcccgatag aatacggatg acacggattg
     3001 acggatcttc acggatcgaa cgaacaaatc gaaaacaatc cgtgcccgaa ggccgtgtca
     3061 tccgtgtttc taccataagt cctctgcgca ctcagatccg ttagtactcc cgggatgatt
     3121 ttgttgttgt ctgtttttat tttgtcaaaa tcatttgttt tgaatcgatc aatctgccgt
     3181 ctacgtataa tgaatactgg taagtgcccg atgaaatcgc agatgcatca accgtcaaaa
     3241 ttcccttccc gcttcctgaa aggtttactt cttttataac tcttcctgct ttatcagtga
     3301 caat
//
LOCUS       DASQJI010000647         3236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1928808,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000647 DASQJI010000000
VERSION     DASQJI010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1928808"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VEV83_17515"
     CDS             <1..1039
                     /locus_tag="VEV83_17515"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HYK46982.1"
                     /translation="ILTVVYMHAILNLGIPALLRYSIGDGVSIFFVLSGFLIGKILLN
                     TINKAAFSLRDLTGFWIRRWMRTLPAYFFVLTFLIIYQVTTGSKSFSDYYHYYFFAQS
                     FFHNGAALYPESWSLCVEEWFYLIVPLVFLISARDSKNALLFCITSIIVVCSAIGVIK
                     ATPLSGHDEWDVHVRQATISRFDSIMYGVLGAYCSYHGLWKHRKTLFIIGLSCYLAIT
                     LYYDLFGFTVFLKYTWLPIQSIAVLLTLPFLENMKTGRGIIYSAATFISVISYSMYLL
                     CFTPFQIIHAKLSSFLHVNSTGFTAVLYLAITFGGAYLLNRLIEKPFMNLRDRHARKK
                     QQGTTKKSVPT"
     gene            1393..2136
                     /locus_tag="VEV83_17520"
     CDS             1393..2136
                     /locus_tag="VEV83_17520"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK46983.1"
                     /translation="MDTSIKILVVEDEMLIGAKISMLLTNLGYEVTGILPRGEDAIIH
                     VEENKPDIIVLDINLKGSIDGIETAAILQRKNIPVIYLTANSDDATFNRAKLTRPTAF
                     ISKPFKQLDLQRAVELTIIHLAGSDPSEITPIELQEEQPFILVDRIFVRNTGRMVKIM
                     LMDILYMEADRNYSRIFTSQKEFLLSVTLKYIEDKLRIPFFMRVHRSYLVNMMHINQV
                     LESDVMIGDKAIPLGTGMREKLMQRMRTL"
     gene            2428..>3236
                     /locus_tag="VEV83_17525"
     CDS             2428..>3236
                     /locus_tag="VEV83_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46984.1"
                     /translation="MSCDFLLFTKKIVAGNKHLQFLMALVFAGNILNAQPAPMDQHAR
                     DSLLNIVNSNSQDSNKVHAFYALSRGTTLSNIGESLDFGNKGLDLARKIKFPMGELEC
                     LEALSFTYAITSSFEKGFSTAYESIDLSKKYAPIRAIYGINMMGLLYQKLGDDREALK
                     WAQNAYYHPDIKHADHFTQWSAVFLLAQEHERLNNLDSAYHFALQTLDYSKQYFPFQA
                     DYPMLILARVNSKLKKYDEAVSYGKQALEASEKNNEAFFENEVQNELATIY"
BASE COUNT          957 a          669 c          673 g          937 t
ORIGIN      
        1 tatcctgacg gtcgtgtaca tgcatgcgat cttgaacctg ggcattcctg ccctccttag
       61 atatagcatt ggcgacggcg tctcgatctt ttttgtttta agcgggtttc ttatcggaaa
      121 gatcttgctt aacacaatca ataaagcagc gtttagttta cgcgacctta cagggttttg
      181 gattcggaga tggatgagaa cactgccagc ttatttcttc gtgctcacct ttctgatcat
      241 ctaccaggta accaccggtt caaaaagttt ctctgattat tatcattatt attttttcgc
      301 gcagtctttc tttcataatg gcgcggcact ttatcctgag tcatggagct tgtgtgttga
      361 agaatggttt tatttgatcg ttcctcttgt ctttctcatt tcagccaggg attcaaaaaa
      421 tgcattactg ttttgcatta cttcaatcat tgtcgtttgt tctgctattg gcgtaataaa
      481 agcaactccg ttatcagggc acgacgaatg ggatgttcat gtaaggcaag ccacaatatc
      541 gcgattcgac agcatcatgt acggagtgct tggcgcttac tgcagttacc acggtctgtg
      601 gaaacacagg aaaacattat tcataattgg gctgagttgc tatttggcga tcactttata
      661 ttacgacctg ttcggcttca ccgtattctt aaaatatacc tggctgccga tacaaagcat
      721 cgccgttttg cttacccttc catttttgga aaacatgaaa accggcaggg gaattattta
      781 cagcgcggcg actttcatca gcgttatttc ttactcaatg tatctgttat gttttacgcc
      841 atttcaaatc atacatgcaa aactttcttc tttcttgcat gtgaactcaa caggctttac
      901 cgctgttctt tacctggcaa taacttttgg aggcgcgtac ctcctgaaca ggttaattga
      961 aaaaccgttt atgaatttaa gagaccgaca cgcacgaaag aaacagcaag gcaccactaa
     1021 gaaaagtgta ccaacgtgat accgttgttt ttcgtgccgc tgacgatcgg atagtgagca
     1081 ctgtcctgat ccgatttgat cacctttgct attttcgcgt ttttgtgatt gatctaaagt
     1141 gagtttattt ttcttcgtgc cttgtcggct tcgagacttt gtggttcaaa aagatcagaa
     1201 accagcaggt gccagggcac caggttgcac taagtcgaac atgcacggaa atctttattt
     1261 ttatagcaca acacgttcct aatttaaaag tcaactcgga tattgtgact cttcgaatcg
     1321 ccaacagtct catgcgaaat aataaacaat gaagtgtgca tcgtagtatc ttcttaattt
     1381 gcaaaaaggg aaatggacac gtcaataaaa atattagtgg ttgaagatga aatgctcatc
     1441 ggagcaaaaa tatcgatgtt gcttactaac ctgggttatg aagtaacagg catattgccg
     1501 cgtggtgaag acgctattat acacgtggag gaaaacaaac ccgatataat tgtacttgat
     1561 atcaatctga aaggtagtat agacggaatt gaaaccgcag ctattcttca gcgaaaaaac
     1621 attcctgtta tatatctcac agccaattct gacgacgcga cttttaaccg ggcgaagctt
     1681 accaggccca cagcttttat atctaaaccc tttaagcaat tggatctgca gagagctgtt
     1741 gaacttacta ttattcacct cgccggcagc gacccatcgg agattacgcc aattgaattg
     1801 caggaggaac agccatttat tttagtggac cgaatttttg tgcgaaatac aggaagaatg
     1861 gtcaaaataa tgctgatgga tatcttgtat atggaagctg atcggaatta cagccgcatt
     1921 ttcaccagtc aaaaagaatt cctcctctcg gttacgctta agtatatcga agataaactg
     1981 agaatacctt tttttatgcg tgtccatcga tcctacctcg taaatatgat gcacattaac
     2041 caggtgctgg aatcagatgt aatgattggg gacaaagcaa taccactggg cacaggcatg
     2101 cgcgaaaagc tgatgcaacg catgcgaacc ttgtaagaaa gaatttacga tttacatttt
     2161 acgatttcgc gcaccttctg ttaaaatgta aagacatggc atgagaaaca tttctccctt
     2221 aaaggaggcg aacgtgaaca ccaactgaaa ccgaagacat cattgaaggc tgcatgaatt
     2281 tatattatgt ccggtctatt atggaacaaa atgctgcgga ctaaaaaatt gctatcttgt
     2341 aaatcgaatc gaagtgagaa tagccgacac gaatttaccg tgtcaaacca aatttttttg
     2401 agcctcacaa cctaaaaaat caaaactatg tcttgtgatt ttttgctgtt cactaaaaaa
     2461 atagttgccg gtaacaagca tttgcagttt ctaatggcac ttgtatttgc aggcaacata
     2521 ttgaatgctc aacctgcacc gatggaccag cacgcaaggg acagtttgct caacattgta
     2581 aatagcaatt cgcaggactc aaacaaggtg catgcctttt atgcacttag tcgcggcacc
     2641 acgctcagca acataggtga gtctttagac ttcggaaaca aaggccttga cctggcgaga
     2701 aaaataaaat ttccaatggg agaactggaa tgcctggaag cgctctcgtt tacttacgcc
     2761 attacttctt cctttgaaaa agggtttagt acagcctacg aaagtataga cctaagtaaa
     2821 aaatatgcgc ctataagggc gatatatggc atcaacatga tgggtttgct gtatcagaaa
     2881 ttaggagacg atagagaagc gcttaagtgg gcgcagaatg cctactatca tccagatata
     2941 aaacacgcag atcattttac gcaatggagc gcggtgttcc tattggcgca ggaacatgaa
     3001 agactcaaca acctggattc tgcatatcat ttcgcgcttc agacacttga ctattcaaaa
     3061 caatattttc cgttccaggc cgattacccg atgctgatct tagctcgtgt taacagcaag
     3121 ctcaaaaaat atgatgaagc ggttagttat ggaaagcagg ccttagaggc ttcggaaaaa
     3181 aacaacgaag ccttttttga aaatgaagtg caaaatgaat tggctacgat ctattt
//
LOCUS       DASQJI010000648         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_393857,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000648 DASQJI010000000
VERSION     DASQJI010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393857"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2310
                     /locus_tag="VEV83_17530"
     CDS             <1..2310
                     /locus_tag="VEV83_17530"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK46985.1"
                     /translation="LIMLFVRSEFSYDRFNSKADRIYRMWQEEKFQGQDFVNTVTPIP
                     MGPAMQSSFPEVEAMCRIYQTNTLIKIGDNSFNENITMVDPSLFKIFDFKLLQGSRDN
                     PFPTPNSVIITPAIAKKYFPVNTNAVGKSFEMQLGDNKELFTVAGIAAPAPEESSVKY
                     DILFSYANENLIFRPGLLHSWFNIFNETYVLLRSNASAASLAKKFPAMLKQQLGEDYG
                     SEEFYMNLQPLTAIHLDTSLPAGIQPTSNPKYSYILGTIGILILLVACINFITLSIGR
                     STTRALEVGVRKALGAERKQLIRQFWGEALMVTMISVVIGLLAALILLKPFNQVISRN
                     LTFHFDPLFVIFCIVLVSIIALIAGIYPAIILSGFNPVEVLKGKLTLKNNAGIFRKGL
                     IVGQFVASIVMIICTIIIGQQMNYMRNKDLGYNKQQVIIIPTNKKRAEGFALAKLYKN
                     ELAKYPQVQSVSASTYSFAETPWVNLGYSDNKKQYHNFQYNEVDASFIETMQIPIVAG
                     RSFQPENTADTNSSILVNETFVKEYGLKDPVGKKFGVYSQRIVGVMKDFNYESLHTKI
                     QPLVVSMKLDTIAHQSNDISFQNAPQPRISVRMKPGNLQDNIKILKTAWQAVAPNQDF
                     EYRFLDEKLASAYEQEQKSATVVKIASGLSIFIACMGLFGLATLTVTRRTKEIGIRKV
                     LGANTAQLVQLLSGDFLLLVLIASIIAFPVAWWAMQTWLSDFAYRTQILWWVFAVAGI
                     ASILVAFVTISAQAIKAAIANPVKSLRTE"
BASE COUNT          683 a          511 c          555 g          617 t
ORIGIN      
        1 cttattatgc tatttgtaag aagtgaattc agctatgatc gcttcaactc aaaagcagac
       61 cgcatctatc gtatgtggca ggaagaaaaa ttccagggac aggatttcgt gaatacggtg
      121 actccaattc cgatggggcc tgctatgcaa agcagcttcc cggaggttga ggcgatgtgc
      181 cggatctatc aaaccaacac attgataaaa attggcgata attcgttcaa cgagaacatt
      241 acgatggtcg atccttcgct atttaaaatt tttgatttta aattattaca gggtagccgc
      301 gataatcctt ttccgacacc gaactctgtg atcattacac ctgcgatcgc aaagaaatat
      361 ttccccgtaa acacgaacgc tgtcggaaaa agttttgaga tgcaattagg agataataag
      421 gaactattta ccgtagcggg tatagcagcg cccgccccgg aggagtcgag tgttaaatac
      481 gatatattgt tttcttatgc gaacgagaac ctcatcttcc gtcccgggct attacacagc
      541 tggtttaaca ttttcaacga gacctatgtg ttgcttcgaa gcaatgcaag cgctgcaagc
      601 cttgcaaaga aatttcccgc gatgcttaag caacaacttg gagaggacta tgggtcggaa
      661 gaattttaca tgaacctgca accattgacg gcgatacacc tcgatacttc actgcctgcc
      721 ggaatacaac ctaccagcaa tccgaaatac tcttatatac tcggtacgat cggcatcctg
      781 atcttattgg tcgcgtgtat aaatttcatc acgctttcaa ttgggcggtc aacaacacgg
      841 gcgcttgaag taggtgttcg aaaggcattg ggtgcagaaa ggaaacagtt gatccgtcaa
      901 ttctggggcg aagcgttgat ggtgacaatg atatcggtag tgatcggatt gctggccgcg
      961 cttattttat tgaagccgtt caaccaggtc ataagcagaa atcttacttt tcacttcgac
     1021 cctcttttcg ttattttttg catcgtgctg gtaagtatca tcgcgttgat agcgggcatt
     1081 tatcctgcta tcatcctgtc cggcttcaat cccgttgagg tgcttaaagg aaagcttact
     1141 ttaaaaaata acgcaggcat tttcagaaaa ggactgatcg ttggacagtt tgttgcatct
     1201 attgtaatga taatatgcac gataattatt gggcaacaga tgaattacat gcgcaacaaa
     1261 gatctggggt acaacaaaca gcaggtgatc atcatcccaa caaataaaaa acgcgccgaa
     1321 ggatttgcgc tggctaagtt gtacaaaaat gaactggcaa aatatccaca ggtgcaaagc
     1381 gtttcggctt ccacgtacag ctttgccgaa acgccatggg tgaatctcgg ttattcagac
     1441 aataaaaagc aataccacaa ttttcagtat aatgaagtag acgcatcgtt catcgaaacc
     1501 atgcagattc ctattgtagc aggcagaagt tttcagccgg aaaatactgc ggacacaaac
     1561 agcagcattc ttgtgaatga aacattcgtg aaagaatacg gactgaaaga tcctgttgga
     1621 aaaaagtttg gcgtttattc gcagcgaatt gtcggcgtga tgaaggattt caactacgaa
     1681 tcgctgcaca caaagatcca gccgctggtg gtttcaatga agttggacac gatcgcacat
     1741 caatcgaatg acatctcgtt tcaaaatgcg ccgcagccgc gtatctctgt gcgtatgaag
     1801 ccaggcaatc tgcaggataa catcaagata ttaaaaaccg catggcaggc cgttgcacca
     1861 aaccaggatt tcgaataccg ttttctcgat gaaaagctcg cctcggcgta tgaacaggaa
     1921 caaaaaagtg cgacggttgt aaagatcgca tccggccttt caatattcat tgcttgcatg
     1981 ggtttgttcg gcctggcgac attaacagtt acgcgccgca cgaaagaaat tgggatcagg
     2041 aaagtgctcg gtgcaaatac tgcacagctt gtgcaacttt tgtcgggaga cttcttgctg
     2101 ctggtgctga tcgcgtcgat cattgcgttc ccggttgcat ggtgggcaat gcaaacctgg
     2161 ttatccgatt tcgcctacag aacacaaata ttatggtggg tttttgcggt tgcaggtatc
     2221 gcctcaattt tagttgcgtt cgtaactatc agcgcacagg ccataaaagc ggcgatcgca
     2281 aatcctgtaa agagcttaag aacggagtga caacaaatca gtgatgagtg atcagtgctg
     2341 agttggagcg accttgaggc ctagac
//
LOCUS       DASQJI010000649         5458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_855098,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000649 DASQJI010000000
VERSION     DASQJI010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5458
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855098"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1750
                     /locus_tag="VEV83_17535"
     CDS             <1..1750
                     /locus_tag="VEV83_17535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46986.1"
                     /translation="QGHEYNFEFHYWDTTSRRQMRDFMDWIPDGLLVTVRLIYDQPYD
                     QTAALWKSDQTVYGVGNTFYDRLKQNGFAQLDSFSYPRTWVFDYEKNNSSFVPGWQFS
                     QSLDDFLNYSRYITSADTLGFITSPAFGPAKAWKKVLWNGYSLDAKAGDRPTVDVIGV
                     DSLKNETVLYTLNTSQQNFDISSVSVSSYPYLKLKMRNADSINLTPYQLRWWRILYEP
                     VPEGALAPNLLYYFKDTVALGQTDTLQIAFKNVSEVPFADSILVNLTVFDANNVANNI
                     PVGKLKALNAGDTGVIRASISTVNFPGVNNLYLDVNPNNAQPEQTHFNNFLYHGLVAA
                     SDVYKPTLDITFDGVHILNDDIVAAKPHVLIKMKDESGYLLLDDTSLITVQLRYPDGT
                     LRQFYFNTDTLLFTPPTSGANNVATVDFTPFLTDDGTYQLIVHGKDKTGNTAGNVDYM
                     VSFVVYNKPMISNLFNYPNPFTTSTAFVFTVTGSQVPQNIRIQILTITGKIVREITMQ
                     ELGPLHIGRNITDYKWDGTDQYGQKLANGVYLYRVLTNLNGKSLDKFPTYGQDGFEVN
                     TDKFFTKGYGKMYLMR"
     gene            1901..2365
                     /locus_tag="VEV83_17540"
     CDS             1901..2365
                     /locus_tag="VEV83_17540"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYK46987.1"
                     /translation="MLFNHYLNGSTTGEMSALTPFNLFFHICSMNKVGFGTRVLNFII
                     DTALIFGIAYGVTKWWDFHVMYWNYTFIPFYAFFWGTMFVYYTIFEAIFKRSPGKWLS
                     LSKVVNQKGTRPAFWQVLVRSVTRLTIIDCFFIPFLDKPLHDYLSRTEVVEV"
     gene            2462..3916
                     /locus_tag="VEV83_17545"
     CDS             2462..3916
                     /locus_tag="VEV83_17545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46988.1"
                     /translation="MLKQNHFTYLILITAALIALFLYNPWLLYFQNDDMVHIPLSRDG
                     VLLQHNTFRPICDISIMIDYKIWSKNASGYHLTNLLLHTANSILTFIACKNIFKKYKL
                     RGDINLKATAIAVLFWIYMNHAEAVFWILGRSAMLGMLFFLCACLAYLQRKSTLNFSL
                     SMLFSILAWLSYESAWIIPFVFLLISYMDIGNGISKWRREKNYLLLIIAAFALYLGFR
                     VYFTGAVTGLYESGGVVNADILFFVGNLARLAIRSWLPPFQDQRILIAAFLILMVLIA
                     LVIIKAKNQKAKRAVIIFLFMWSVSLLPYITLGVDTKGVESERFLYMPSFFICIVLAL
                     IIFQWPHIVSTAAISVICAVSLFVLSYHAKQYRFAGNVVKNTINVIDSLHNKTRLIAD
                     RVPQENFGALIFRAGFPEGVNWLKNLSTFDTVIVLSQSHVDLPLRKNYPGVYSHDLSL
                     IPDTNIRSHFAGSAAYLLYTDSSIIIITSADGRQ"
     gene            3938..5080
                     /locus_tag="VEV83_17550"
     CDS             3938..5080
                     /locus_tag="VEV83_17550"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYK46989.1"
                     /translation="MVKTITSRINGVREQKLLFILFCLWLLVQLVSFLQFGIVTNNEA
                     VKYRNEAYNILNTGRFSEPKYIFYSAYIFVRVLFIESGFENTGVFALQLLFNLLAMFC
                     FFETAMKLSDNSAFAFVATLLLVLCYPWQYWTNFLYTESFFCSLIISFTFLLFGIKKR
                     NIFRYLAALLLFAVILLARPTGILLIPVLCFLLLYFLLSRKKFIIAVSSAVLMLSAFI
                     ILLNSAAKAGSGFDFVKPIIENSVLCYISTQPQTGTALNGNAVGAIIHHFQSDPINFF
                     KLSALKFFSFWGLTRPYYSTLHNWLLRIYFYPIYFFAFVGILSLKKHNRYFAVYSTAM
                     LLIFTLTVMITCDDWNNRFLMPIIPLVILLATFGIRQLSAKFLGEA"
     gene            complement(5058..>5458)
                     /locus_tag="VEV83_17555"
     CDS             complement(5058..>5458)
                     /locus_tag="VEV83_17555"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HYK46990.1"
                     /translation="LLIGVNDQYQHLDTAGYRERFTECLEAAIRFAGNNRHHVFVLSI
                     PDYSVTPFAADSDTAQIAKEIDEFNAINKAITFSYNVSYIDITPLTRDADDDRSLIAN
                     DGLHPSEKEYARWATLLAMEIKKVMLPPKI"
BASE COUNT         1396 a         1165 c         1179 g         1718 t
ORIGIN      
        1 acaagggcac gaatacaatt ttgaatttca ttactgggac accacaagtc gtcggcaaat
       61 gcgcgatttt atggattgga tcccggatgg tttgcttgtt acggttcgat tgatctatga
      121 tcagccctac gaccaaactg cagctttgtg gaaatcggat caaacggtct acggcgttgg
      181 taacacattt tatgaccgct taaaacaaaa tggttttgct caactggatt cgttcagtta
      241 tccgcgtacc tgggtttttg attacgaaaa aaataattct tctttcgttc cgggatggca
      301 attcagtcaa agccttgatg actttttaaa ttacagtcgt tacataacat cggccgatac
      361 attaggcttc atcacttcgc cggcattcgg ccctgcaaag gcgtggaaaa aagttttgtg
      421 gaacggctat agccttgatg caaaagcggg agacaggcca actgtcgatg tgatcggggt
      481 tgattcactc aagaacgaaa cagttttgta caccctcaac acatcgcagc agaatttcga
      541 tatttcatca gtcagtgttt caagttatcc ctatttgaaa ctgaaaatgc gcaatgcgga
      601 tagcatcaat cttacgcctt atcaactgcg ctggtggaga attttatatg aacccgttcc
      661 tgaaggcgcg ctcgctccaa atctgcttta ttactttaag gacacggtcg ctcttggcca
      721 aacagacacg ctccagatcg cattcaaaaa tgtgagtgaa gttcctttcg ccgatagcat
      781 tcttgtaaat cttacagtgt ttgacgcaaa taatgttgct aacaatattc ctgtgggtaa
      841 attgaaagca ttgaatgcag gtgataccgg cgtgataaga gcaagcatct caactgtgaa
      901 cttcccgggc gtaaacaact tatatctcga cgtaaatcca aataacgctc agcctgagca
      961 gacgcatttc aataatttcc tttatcacgg cctggttgcg gcttccgatg tttataaacc
     1021 gacccttgac attacgtttg acggcgtgca tattttgaat gacgatatag ttgcagcaaa
     1081 gccgcatgtg ctcattaaga tgaaggatga gtccggttac ttactgctcg acgatacatc
     1141 gctgataacg gtgcaactgc gttatcctga tggaacgttg cggcaatttt atttcaatac
     1201 tgatacgttg ttgttcacac ccccaacatc cggagccaac aatgtcgcaa ccgttgattt
     1261 cacaccgttc ttaacagacg acggcactta ccagctcatc gttcacggaa aggacaaaac
     1321 gggaaacacc gctggcaatg tagattatat ggtttcgttt gttgtgtata ataagccgat
     1381 gatcagtaat ctcttcaatt atccgaatcc gttcacaaca tccactgcgt ttgtgttcac
     1441 tgtaacaggc agccaggtgc cacagaatat tcgcatacaa attttgacaa taacaggcaa
     1501 gatcgtaagg gaaattacga tgcaggagtt gggtccgttg cacattggca gaaatattac
     1561 ggattataag tgggacggta ccgatcaata cgggcagaag ttggccaatg gcgtctacct
     1621 gtaccgggtt cttacaaacc tcaatggaaa atcccttgat aagtttccta cttacgggca
     1681 ggatggtttt gaagtgaaca cggataaatt ttttacgaag ggttatggaa agatgtattt
     1741 gatgcgatga gaataacgct gtgttccccg gctcacttct tacttaacgg aagcaaagaa
     1801 attaaaatga cgttgtccgc aggagcgcta ttcgcacagt tgacaccatt tgttcctctg
     1861 aaaaccttat gatcttattt gcattttaat ttacttgata atgctgttta accattacct
     1921 caatggttcg acaacaggag agatgtctgc tctcacacct ttcaatttat tcttccatat
     1981 ttgcagcatg aataaagtgg gatttggcac ccgggtatta aatttcatta tcgacaccgc
     2041 attgatcttt ggcatcgctt atggcgtcac taaatggtgg gattttcacg tgatgtactg
     2101 gaattataca ttcattcctt tttatgcttt tttctgggga acgatgtttg tttattacac
     2161 gatcttcgaa gcaatattta aacggtcacc ggggaaatgg ctttcgctga gtaaagtggt
     2221 taatcaaaaa ggaacaagac ccgccttttg gcaggtgctt gtcagaagcg ttacacggct
     2281 gactattatt gattgtttct ttattccctt tctggataaa ccgctacacg attatttaag
     2341 caggacggaa gtggtggaag tttaattaag gtgcgtgtcg tgctgcgtta tttgttacac
     2401 cttggtcgcc caatagaatg ctctcccagg tttcaccagt tttttattag tttcatgcgc
     2461 gatgctgaag cagaatcact tcacatatct tatcctgata actgccgctt tgattgcatt
     2521 attcctgtat aacccatggc tactctattt tcaaaatgat gacatggtgc acattccctt
     2581 aagccgcgat ggtgttttgt tgcagcacaa tacattcagg ccgatatgtg acatcagcat
     2641 catgatcgac tacaaaattt ggagcaaaaa tgcctcgggg taccatctca caaatcttct
     2701 gttgcatacg gcaaattcaa tactgacctt catcgcctgc aaaaacattt tcaaaaagta
     2761 taagcttcgc ggcgatatca accttaaagc gactgcgatc gcagttttgt tttggatcta
     2821 tatgaaccac gcggaagccg tattctggat actcggtcgc tccgctatgc tcggcatgtt
     2881 attctttttg tgtgcatgcc tcgcctatct tcagcgaaag tcaacactaa acttttcttt
     2941 aagtatgctg ttctccattc tcgcatggct tagctatgaa tctgcatgga taattccgtt
     3001 tgtattcttg ctgatttctt atatggatat aggtaacgga atttccaaat ggaggcgcga
     3061 gaaaaattat ctgcttttaa ttattgcggc gtttgcgtta tacctgggct tcagggtcta
     3121 ttttaccggc gcggtgacag gcttgtatga gagcggaggc gttgttaatg cggacatctt
     3181 attcttcgtc ggcaatcttg ctcgacttgc cataagaagc tggttgccgc ctttccagga
     3241 ccaacggata ttgatcgcag cgttccttat tttgatggtg ttgatcgctt tggtgatcat
     3301 caaagcgaaa aatcaaaaag caaaaagggc ggtcattatt tttcttttta tgtggagcgt
     3361 ttctttgctg ccgtacataa cgctgggcgt ggatacaaaa ggggtcgaaa gcgaaagatt
     3421 tctatacatg ccttcttttt tcatttgcat tgtgcttgcc ttgataatat ttcagtggcc
     3481 gcatatcgtg agcactgccg ccatatccgt tatttgcgca gtatcacttt tcgtactttc
     3541 atatcacgca aaacaatatc gtttcgcggg taacgtagtg aagaatacaa ttaatgttat
     3601 tgatagtttg cataacaaaa cgcgcctaat cgccgaccgt gtgccgcagg aaaattttgg
     3661 cgcactgatc tttagagcgg gtttccctga aggggttaac tggcttaaga acctgtcgac
     3721 gttcgatacg gtgatcgtgt tgtctcaatc gcacgtggat cttcctttgc gaaaaaatta
     3781 tcctggtgtt tacagccatg atctttcgct gataccagac actaatatcc ggagccattt
     3841 cgccggtagc gcggcttacc tcttgtacac cgactcatca ataataatta tcactagcgc
     3901 tgatggcagg cagtgaactt catcgtaata aatgaacatg gtgaagacca taaccagcag
     3961 aataaacggt gtgcgcgagc agaagctttt atttattctt ttttgtttgt ggctgctggt
     4021 gcagcttgtt tccttcttgc agtttgggat tgttacaaat aatgaagctg tcaaataccg
     4081 gaacgaagct tacaatatct taaacaccgg tcgcttttcc gaaccgaaat atattttcta
     4141 ctctgcctac atttttgtcc gcgtcctatt tattgaaagc ggttttgaaa ataccggcgt
     4201 tttcgctctt caactactct ttaatctgtt ggcaatgttt tgttttttcg aaactgcaat
     4261 gaagctttca gacaattcgg cttttgcatt tgtggcgaca ttgctgcttg tgctttgcta
     4321 tccgtggcaa tactggacga attttttata taccgaatct ttcttttgtt cgcttataat
     4381 cagcttcaca ttcctgctgt ttggaatcaa gaagagaaat atttttcgct atctggcagc
     4441 attactttta ttcgccgtga tcctattggc caggccgacg ggcatacttc tgatacccgt
     4501 gttgtgtttc ctgcttcttt atttcctgct gtcaagaaag aaatttatta tagctgtgtc
     4561 ttcagctgtg ctaatgttgt cggcttttat tatcctattg aactctgctg cgaaagcggg
     4621 ctcaggcttt gatttcgtga aaccgatcat cgagaacagt gtgctttgtt atatatccac
     4681 gcaaccacaa acaggcactg cgttaaacgg taacgctgtg ggcgcgatca ttcatcactt
     4741 tcaaagtgat ccgatcaatt ttttcaaatt gtccgccttg aagttttttt ctttctgggg
     4801 tcttacaagg ccgtactact ccacgttgca caattggttg ctccggattt atttttaccc
     4861 gatttatttt ttcgcgtttg tcggtatatt aagtttaaag aaacataacc gatactttgc
     4921 agtgtacagc actgcgatgt tgttgatttt tacgcttact gtgatgatca cgtgcgatga
     4981 ctggaacaac cgcttcttaa tgccgataat tccattggta attcttcttg caacgtttgg
     5041 cattcgccag ttatccgcta aatttttggg ggaagcatga ctttcttaat ttccatagcc
     5101 aaaagtgtgg cccatcttgc atattctttt tcggatggat gtagtccgtc atttgcgatc
     5161 agcgatcgat catcgtctgc gtcgcgggta agtggcgtga tgtcaatgta tgaaacattg
     5221 taagaaaatg taatcgcctt gttgatcgca ttgaattcgt cgatctcttt cgcgatctgc
     5281 gccgtgtcgc tatcggcagc aaatggcgtg acactataat cagggattga aaggacgaac
     5341 acatgatgcc ggttgttgcc tgcaaatctt attgcggcct caaggcattc ggtaaatcgt
     5401 tcacggtatc ctgctgtatc gagatgttgg tattggtcat tcaccccaat taaaaggc
//
LOCUS       DASQJI010000650         1764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_241713,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000650 DASQJI010000000
VERSION     DASQJI010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241713"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..1314
                     /locus_tag="VEV83_17560"
     CDS             157..1314
                     /locus_tag="VEV83_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5009 domain-containing protein"
                     /protein_id="HYK46991.1"
                     /translation="MATITDTSRRVKVRSDATSDAPQRLYSLDALRGFDMFWIAGAEE
                     IVHTMATATGNSFWKGFSNQLTHPAWNGFHFYDLIFPLFLFIAGVATPYSVGREREKG
                     KSTNELLWRVIKRGLILVVLGVIYNNGLKIMPLSEIRFPSVLGRIGLAYMFANIIYLY
                     TKERGQIIWFGVLLIGYWLLLKFASAPGYPAGDLTMEGNFASYIDRSIIPGRLYLGIH
                     DPEGLMSTIPAIGTGLLGILTGTFLKNNKKYSGAQKSLYMFIGGIICLGLAQLWNLDF
                     PINKNLWTSSFVLNVGGYSLILLSIFYYIIDVLGYKRWAFFFKVIGMNSILIYMSGRF
                     INWEYSTTAFFGWLGQLFSNPWNAVIMAICFVFVKWCFLYFMYRKKVFLRV"
BASE COUNT          417 a          399 c          394 g          554 t
ORIGIN      
        1 attttcattt atttggttct tgtaatttgc aatttagaat ttttatttct ttgtctcttg
       61 tgatttggaa tttgaaattt ttacatcggt ctcagcaatt ttcccgaata acccactact
      121 tttatcttct ttgtttctca ctttttcatc ttcattatgg caacaataac tgacacttcg
      181 cgccgcgtca aggtccggtc cgacgcgacg agcgacgcac cgcaacgact ttattcgctc
      241 gacgcgctcc gcggtttcga catgttttgg atcgcaggtg cggaagagat cgttcacact
      301 atggccacag caacgggcaa ttctttctgg aaaggctttt caaaccagct cacacacccg
      361 gcctggaacg gatttcattt ttatgacctg atatttccgc tgtttctttt tattgccggt
      421 gttgcaacac cttattcggt cgggcgtgaa cgggaaaaag gaaaaagcac aaacgaactt
      481 ttatggcgcg tgataaaaag gggattgatc ctggtcgttc ttggcgtcat ttataataac
      541 ggcctgaaaa taatgccgct ttccgagatc cgtttcccaa gtgtgcttgg gcgtattggg
      601 ttagcgtaca tgtttgcgaa cattatttat ctctatacaa aagagcgcgg ccagataata
      661 tggtttgggg tgttgctcat tggttattgg ttgttgttga agtttgcatc cgcacccggc
      721 tatccggctg gcgacctcac catggaagga aactttgcat cgtatattga tcgaagtatt
      781 attcccggcc ggttgtatct cggcatccat gatcccgaag gattgatgtc gaccattcca
      841 gccattggca ccggcctact tggcatattg actggtacat ttttaaagaa caacaagaag
      901 tatagcggcg ctcaaaaatc attgtacatg ttcatcggag gaattatttg cctcggtctt
      961 gcgcaattgt ggaacctgga ttttccgatc aacaaaaatt tgtggaccag ttcatttgtg
     1021 ctgaacgtgg gtggttatag tctgatactc ctttccattt tttattatat catcgatgtg
     1081 ctgggttaca aacgctgggc ttttttcttc aaggtcatcg ggatgaattc gatcctcatc
     1141 tatatgtcgg gccgctttat caactgggag tacagcacaa ctgcgttctt cggctggctt
     1201 ggccagcttt tcagcaatcc gtggaatgct gttattatgg ctatctgctt tgtgttcgtg
     1261 aagtggtgct tcttgtattt tatgtacagg aagaaggtgt ttttgagagt ttaaggatct
     1321 ctgatctctg atgtatgatg tcggatctcc tgcgtcattt cgaaggagcg tcctttatcg
     1381 ttatttattt gcaggaccga tctgcgactg agaaatccct acccgctgcc cgtcatttcg
     1441 aaggagcgtc cttatcatta tttatttgcg cacccaaatg cgactgagaa atctcaacgt
     1501 caaccaagat acgtagaagc gaccgtcagc taaatttatt tgatatcgca cggcgcgagt
     1561 gagaaatccc taccgtgctg cccgtcattt cgaacgagcg tcctttaaca ttatttattt
     1621 gcacaacgaa gatgcgactg agaaatccct acgtaaagaa aatccgtccc aatccttgcc
     1681 atccccatca tccgtgttcc attcaaatag cacacggatg acacagcctt cgggcacgga
     1741 ttgccacgga tcagaatttc gaat
//
LOCUS       DASQJI010000651         6291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1930148,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000651 DASQJI010000000
VERSION     DASQJI010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930148"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VEV83_17565"
     CDS             complement(<1..1275)
                     /locus_tag="VEV83_17565"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46992.1"
                     /translation="MFRNYIKTAFRSLRKNRLYSVINIFGLAVGLTACLLIGVYIDHE
                     LSYDKFNANANRIVRATMEYRSAGTVNSVATTGTKVGPQFKRTFPAVEEYCRTFISHN
                     VVKAGDKMFDEPRILFADPAFFKIFSFHIVEGDPSTALDALDKIVLTQSMAKKYFGSE
                     DALNKTITSGGKDLRVSAICADAPQNSQIKFDFVTQFLNLRNDVDQETWWTANWITYL
                     LVRDEKSIPQLQQQVSDYMKTPAVRADARLQGTDYLTYKLEPLTKVHLYSPLAGFEPN
                     GSITYIYMFAVIALLILVIACANYTNLATAQSAGRSGEIGMRKVMGASKKQVFMQFMS
                     ESALITFVAAVMALGMSILLIGDFNRLTGKHFTPDSILQPIPLMSLLLFAVLVSFFAG
                     VYPAIILSGTQVMGVLKKGFSFTGGNNMLRKTL"
     gene            complement(1411..3804)
                     /locus_tag="VEV83_17570"
     CDS             complement(1411..3804)
                     /locus_tag="VEV83_17570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46993.1"
                     /translation="MFENYFKTGFRNVSKHKVFSFINIMGLTVGMTACFLIFLYVSFE
                     LSYDSFNSKADRIYRVVADIKTPTEVINADRPAWAVAANAKNEFPEIESFVRIAHDDV
                     LVRKGDIKFQEENAAWADSSLFHVFDFKLLKGNPQTCLTDQFSVVFSETAAKKYFGNE
                     DPIGQTLLITSGALDGDNAQPAKVTGIMKDIPENSDIKADMFLSMSTINQRSRLDSNW
                     GGYWPEAFLLLKPGSDASALQAKFPAFLERRDGTEMKQSQMYPTLFLERLRDVYLRST
                     RSGSKTGNINNVYIFSIIAVFILLIACINFINLTTARSAERAKEVGIKKVVGAERSQL
                     MRQFIGESVMLSLIAFVLTIGLSALLLPLFNQLAGKTISTGIFSNLEYLLILLLAAVA
                     IGLIAGIYPALVLSSFKPVVVLKGRFATGTRGIILRKALVIAQFSISIALIIGTIVVY
                     NQMNYMRSQDLGFKKDQMMVIDTNGDPAKKAFQEAISGLPGVKSTAMSSSVPGGGNMG
                     AYSEIENIKGDLQVANLDLYYVDFDYINQYKIKVVAGRAFSRDFATDTTQAMILNEAA
                     VKMFGYTSPQQAIGKRFKQWGREGKIIGVVKDFHFRSLQEQIKPLSMRIEPNGNNLVS
                     VNLSTTNLPKTIAAIENAWKRLIPNRPFSYYFLDEFFDRQYRAEERFGKLFLNFAVLA
                     IFISCLGLLGLASYSTMQRTKEIGIRKVMGASVSNVVKLLSKDFLKLVLISFFIAAPV
                     GWFVMNKWLQDFAYRTPISWWIFAAAVVLTLAITCLAVGIQTIKAAIANPVRSLRTE"
     gene            complement(3887..6265)
                     /locus_tag="VEV83_17575"
     CDS             complement(3887..6265)
                     /locus_tag="VEV83_17575"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK46994.1"
                     /translation="MFKNYFKTAWRNITKNKAHSTINIAGLSVGMAVAMLIGLWMYTE
                     LSANKHFKNYDSLYQVIMHQSNNNEIYTSWVTPFSLGDELKSNFSDVKAAAMCDGGGR
                     HSLENGDRKLMKDGFFIGEEAVSMFSLNILFGDKDPLHDPYSIILTDETAKALFNTTN
                     AVGKIVKLDNATDLTVTAVVTKQPKNSSLTFDCLLPWKLQESISPGVKNYAGDWGNDS
                     WQTFVQLNENANAESVDAKIKDVILNHFPGDKIMQAAKPQIELFPMSKWKLYTDFENG
                     KNVGGYIKYVRMFGILGLIVLLIACINFMNLSTARSSKRAKEIGIRKVAGSLRKQLIA
                     QFLSESILITIIAFFLSVVIVFFTLPYFNKLTDKDMSLFISSPSFWLFIVVFTLLTGL
                     IAGSYPALYLSSFSPIKVLKGKINTGKGSALPRKILVVIQFTSSVVLMIGTIIIYQQI
                     QHGKDRPIGYNKNGLITVNYSSDMNKSFDALQNDLLATGAVTSMCKSNSAATDICCSQ
                     NGWEWRGSTTTDKNTGINTIATEYNFTKTFGIRLIGGRDFSTDYPTDSNAVLLNQAAV
                     DLMRLKNPVGETIKWNGQNRMIIGVVPNLQMESPFQSISPMIIKFSPGWVNALIVRIN
                     PNVSMSKAINTIKPIFEKYDAQFDYQFADEAYTKKFNYEELVANLAAVITIIAIFISC
                     LGLFGLASYMAEQRVKEIGVRKVLGASVQSIWQMLSKDFVVVVLIACTIAVPIAWYLM
                     NNWLKTYQYKINMGIGVFACVIAGSVVITLLTVSFQAIKAAIANPVNSLRTE"
BASE COUNT         1791 a         1403 c         1223 g         1874 t
ORIGIN      
        1 cagggtcttg cgcagcatgt tattgccacc tgtaaaactg aaacctttct tcagtacacc
       61 catcacctgc gtgccggata aaataatcgc agggtataca ccggcaaaaa agcttacaag
      121 caccgcaaat aaaagaagag acataagggg tattggttgt aaaatggagt caggcgtaaa
      181 atgttttccc gtcagccggt tgaaatcgcc gatcagcaat atgctcatcc cgagagccat
      241 aacggctgcg acaaaagtta tgagggccga ttcgctcatg aactgcatga acacctgctt
      301 ttttgatgcg cccatcactt tacgcatccc gatctcgccg cttctgccgg ccgattgtgc
      361 ggtggcaaga ttggtgtagt tcgcacatgc gatcacgaga atgaggaggg cgatcactgc
      421 gaacatgtag atataagtga tacttccatt cggttcaaag ccagcaagtg gagagtagag
      481 atgaactttc gtgagcggtt ctaacttata tgtaagataa tcggttcctt gcaagcgggc
      541 gtctgcacgc accgcaggcg ttttcatata atcgctgacc tgctgctgca attgcggaat
      601 actcttttcg tcgcgcacca gtaaatacgt gatccagttt gccgtccacc acgtctcctg
      661 gtctacgtcg tttcgaagat tgagaaactg ggtgacgaaa tcaaatttta tttgcgagtt
      721 ctgtggcgca tcggcacata ttgccgacac gcgcagatct ttgccgcccg atgttatcgt
      781 tttatttaac gcgtcttcgc tcccaaaata ttttttcgcc attgattgcg tcagcacaat
      841 tttgtcaagc gcatcaaggg cagtagacgg atcaccttca acaatgtgga aagagaagat
      901 cttaaaaaac gccgggtctg cgaataatat gcgcggctcg tcgaacatct tatcaccggc
      961 cttcacaacg ttatggctga tgaacgtccg gcagtattct tccacggcgg ggaaagtgcg
     1021 cttgaactgc ggcccaactt tagtgcccgt agttgcaacg gaatttaccg taccagcgct
     1081 gcgatattcc attgtcgcac gcacaatgcg gtttgcgttc gcattgaact tgtcataact
     1141 cagttcatga tcgatgtaca caccgatcaa caaacatgcg gtgaggccaa ccgccaggcc
     1201 aaagatgttt atcaccgaat acagcctgtt cttgcgcagg ctgcgaaaag cggttttaat
     1261 gtaattgcga aacattgcga tttacgattt acgatttaca atttacgatt taggagttag
     1321 gatttgggat tttacaatag tcttgtaccg aactcattac tcatcactca ttactcatca
     1381 ctcattactc attattcatc actcattttc tcattcggtt ctcaaacttc taaccggatt
     1441 tgcgatcgct gctttgatcg tttgaatgcc tacagccaaa caagtgatag caagtgtcag
     1501 cacaactgct gctgcgaaaa tccaccagct aatcggagtt cgatacgcaa agtcctgcag
     1561 ccatttgttc ataacaaacc acccaaccgg cgcagcaata aaaaatgata tgagaaccag
     1621 ctttagaaaa tctttcgata agagcttgac gacgtttgaa acactcgcac ccattacttt
     1681 gcggatacct atttctttgg tgcgttgcat cgtgctatac gatgcaagac caagcaggcc
     1741 aagacatgaa ataaaaatcg ccagcaccgc aaaatttaaa aacagctttc cgaatctttc
     1801 ttccgcgcgg tattgcctgt caaaaaattc gtctaaaaag taatagctga aaggtcggtt
     1861 cggtattaat ctcttccagg cgttttctat tgctgcaatt gttttcggca aattcgtcgt
     1921 ggataaattt accgatacga gattgttccc gtttggttca atacgcatcg ataaaggttt
     1981 gatctgttcc tgcagggagc ggaaatgaaa gtctttcacc accccgatta tttttccctc
     2041 tctcccccac tgtttgaaac gcttgccaat agcctgttgt ggcgatgtat agccaaacat
     2101 tttcactgca gcttcgttca aaatcattgc ctgggtggtg tcggttgcaa aatccctgga
     2161 aaatgcacga ccggctacaa cttttatttt atattgattg atataatcaa agtcaacata
     2221 atacagatcg aggttagcta cctgcagatc accttttatg ttttcaattt cagaatatgc
     2281 gcccatatta ccgccgccgg gaacacttga tgacatggca gttgatttca cacccggcaa
     2341 tcctgatatc gcctcttgaa aagctttttt agcaggatcg ccatttgtat cgatcaccat
     2401 catctggtct tttttgaaac ctaaatcctg gctacgcatg taattcatct ggttatagac
     2461 gacaatagtg cctatgatca atgcaatcga tatactaaac tgcgcaatta ctaaagcttt
     2521 tcttagtata atacctctcg tgccggtagc aaaccgccct tttaaaacaa caacaggttt
     2581 gaaagaagat aaaaccaatg ctggataaat acctgcaatt aaaccgatgg caactgctgc
     2641 aagcaaaaga ataaggagat actctaggtt agaaaaaatg cctgtactta tcgtttttcc
     2701 tgcgagctgg ttaaacaatg gaagcaataa cgcagataaa ccaatggtta atacaaacgc
     2761 aattaaagac agcatcactg attcaccgat aaactgtcgc ataagttgag atctttctgc
     2821 acctacgact ttttttattc ctacttcttt tgcccgctcc gcagaacgtg ccgttgtaag
     2881 atttatgaaa ttgatgcatg cgatcagcaa aataaaaacg gcgatgatag agaagatgta
     2941 aacattatta atattacccg ttttgctccc gctacgcgtt gagcgcagat acacatctct
     3001 caatcgttca agaaacagtg ttggatacat ttggctttgt ttcatttctg ttccatcacg
     3061 tctttcaaga aaggcaggaa attttgcctg caaagcactt gcatcagacc ccggttttaa
     3121 caacagaaac gcctcgggcc aataacctcc ccagttgctg tctaaccgcg acctttggtt
     3181 aatggtgctc attgacaaaa acatgtccgc ttttatgtct gagttttcgg ggatgtcctt
     3241 catgatgccg gttacttttg ccggttgcgc attatcgcca tctaaagcac cacttgtgat
     3301 cagcaaagtc tgaccgatag gatcttcatt tccaaaatat ttttttgcag ccgtttccga
     3361 aaatacaacg ctgaattggt ctgtgaggca ggtttgagga tttcctttca gcagtttaaa
     3421 atcaaacaca tgaaataacg aagaatctgc ccatgccgca ttttcttcct ggaattttat
     3481 atctcctttt cgcacgagta cgtcgtcatg cgcaatacgg acgaaagatt ctatttccgg
     3541 gaactcattt tttgcattgg ctgctactgc ccatgcgggc ctgtctgcgt tgatgacctc
     3601 tgtgggtgtt ttaatgtcag ccacgacccg gtaaatacga tctgccttgc tattaaatga
     3661 atcatagctt aactcaaaac ttacatacaa aaagatcagg aagcacgcag tcattccaac
     3721 agttaagccc atgatgttga taaacgagaa caccttgtgc ttgctgacat tgcgaaatcc
     3781 cgttttgaaa taattttcaa acataaaaga tgatttctaa tgcctgatgt aatgatatct
     3841 gattgttcat tttcaaattt tcaaatcgcc tcaatttcaa attgacctat tccgttctta
     3901 aactgttcac cggatttgca atcgctgctt tgattgcctg gaagcttact gttagtaatg
     3961 tgatcacaac agatcctgca attacgcatg caaacactcc aatacccata ttgattttgt
     4021 attgatatgt ttttaaccag ttgttcatta aataccaggc aatgggtaca gctatggtac
     4081 acgctatcaa aaccaccaca acaaagtctt ttgaaagcat ttgccatatg ctttgtacac
     4141 tggcacctaa aactttgcgc acaccgattt cttttacacg ctgttctgcc atataggaag
     4201 caagaccaaa caatcctaaa caggaaataa agatggcgat gatagtgatc acagcagcca
     4261 ggttagctac caattcttcg taattaaatt ttttggtgta tgcttcgtct gcaaattgat
     4321 agtcgaattg tgcatcatat ttttcgaaaa ttggttttat ggtgttaatt gcttttgaca
     4381 tggagacgtt tggatttatc cgcacaatca aagcattcac ccaaccagga gaaaatttta
     4441 tgatcattgg cgaaatggat tgaaaaggtg attccatttg caggtttggt accacaccaa
     4501 taatcattct gttctgacca ttccacttga tggtttcacc aacagggttt ttcaaccgca
     4561 taagatctac ggcagcctgg ttcagcaaaa cggcatttga atcggttgga taatccgttg
     4621 agaaatctct gccgccaatt aacctgatac cgaaggtttt ggtgaaatta tattcagtgg
     4681 cgatagtatt aataccggtg tttttatcgg ttgtggtact tccccgccac tcccatccgt
     4741 tttgactgca gcaaatgtcg gttgcggcag agttagattt acacatcgaa gtaactgcac
     4801 cggttgccag caaatcattt tgcaacgcat caaaactttt attcatatct gatgaataat
     4861 tcaccgttat caaaccattt ttgttataac caatcggacg gtctttgccg tgttgtattt
     4921 gctggtaaat gataatagtt cctatcatca gtactacaga acttgtgaac tgaatcacta
     4981 ccaatatttt tctcggcaac gcacttcctt taccggtgtt tattttgcct ttcaatactt
     5041 ttatcggact aaaagatgaa agatataatg caggataact tccggctata agacctgtta
     5101 gcaaagtgaa gactactata aacagccaaa atgaagggct tgagataaat aagctcatgt
     5161 ctttatcagt gagtttatta aaataaggaa gtgtaaaaaa tacgatgaca actgataaaa
     5221 agaacgcaat aattgttata agtattgatt cgctcaaaaa ctgcgcgatc aactgtttgc
     5281 gcaacgaacc ggctaccttg cggataccaa tctcttttgc acgctttgat gaacgtgcgg
     5341 tgcttaaatt cataaaattg atacaggcaa taagcaatac aatcaaacct aatattccaa
     5401 acatccttac gtacttaata tacccgccaa catttttacc attttcaaag tctgtgtaca
     5461 gcttccattt gctcattggg aataattcga tttgaggttt ggcagcctgc attattttgt
     5521 ctccgggaaa atgatttagt atcacatctt taattttcgc atccacgctt tcagcatttg
     5581 cattttcgtt tagctgaaca aatgtttgcc atgaatcatt gccccaatcg ccggcgtaat
     5641 ttttaacacc aggggaaatg ctttcctgca gcttccatgg aagtaaacaa tcaaaagtga
     5701 gagagctgtt tttaggttgc tttgtaacta ccgctgtaac cgttagatcg gttgcattat
     5761 ccagctttac tatttttcca accgcatttg ttgtgttgaa aagcgccttc gcagtctcat
     5821 cagttaaaat aattgagtaa ggatcatgca atggatcttt atcgccaaaa agtatgttta
     5881 atgagaacat gctaacagct tcttcgccaa taaaaaatcc atccttcatc agttttctat
     5941 caccgttttc caacgaatgc ctgccacctc catcacacat ggcggctgct ttaacatcgc
     6001 taaagtttga tttcaattca tcacccagcg aaaatggtgt tacccagctt gtataaattt
     6061 cattattgtt tgattgatgc atgatcacct ggtacaatga atcataattt ttaaaatgtt
     6121 tattggcaga aagttcagta tacatccata gccctataag cattgctacc gccatgccta
     6181 cagacaatcc tgcaatattg atagttgaat gcgctttgtt ttttgtgata ttgcgccacg
     6241 cggttttaaa atagttttta aacatagaag ctgatttgtc ctgcccgact g
//
LOCUS       DASQJI010000652         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_241937,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000652 DASQJI010000000
VERSION     DASQJI010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241937"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VEV83_17580"
     CDS             <1..265
                     /locus_tag="VEV83_17580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46995.1"
                     /translation="EKMDVYSYRYLLDGILLLLIVIKTVHFLKNKNYNWKGYHWIYFS
                     EYNIKGSTSSARGKLKRRQNLFSLIIVIVLIIDLVIMLLFKPL"
     gene            357..716
                     /locus_tag="VEV83_17585"
     CDS             357..716
                     /locus_tag="VEV83_17585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SnoaL-like domain-containing protein"
                     /protein_id="HYK46996.1"
                     /translation="MTTKEIADRLVELCSKGEFETAQRELLADDAVNIEPHATPDFPK
                     ETHGLQNIIDKGHKFGSTIETVHAIHMSQPLCAGNSFAVVLHMDLTMKEKGHMNMSEL
                     CVYTTKDGKIVSEQFYM"
     gene            848..1048
                     /locus_tag="VEV83_17590"
     CDS             848..1048
                     /locus_tag="VEV83_17590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK46997.1"
                     /translation="MRTITKLGSVLAFIAIMASSCSVEYRTRHRRHRVIEVGMNVKDT
                     QHTQVANAAGQGTNGETPVAVK"
     gene            1178..>2614
                     /locus_tag="VEV83_17595"
     CDS             1178..>2614
                     /locus_tag="VEV83_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HYK46998.1"
                     /translation="MKLYPESAELQLEFSKIKDIVSSHCETEYGKSRVASLRIHTQKE
                     FITLELQQAFEYKTLIENKQVFPNSFTLNVDRELRILSLEGGILHAADFLNIRRLALN
                     ADSIFKWFSTDRRIAYPALARVIEHSFYEKAIVKLIDEIFDETGNVKDNASDALQKIR
                     QNLYRKRNELRRVFEKVVARLNKAGYSAEIEESFSNGRRVVAVFSEHKRQVKGILHGE
                     SDSRKTAFIEPEETIELNNEVFSLEQDEQKEILRILRNLTAELSVYSGLLYAWLTIAG
                     EYDFIKAKAKLAVDIKGNYPNLTDKAIVDLKDAYHPLLYLYNKQSTRATIPITLRLDE
                     TNRILVISGPNAGGKTVTMKTIGLNQMMVQSGLLVPVNPASEMGIFKQLFIHIGDTQS
                     IEFELSTYSSHLLHMKYFVENANGKTLFFIDELGSGSDPNLGGAFAEVILDELNRKHA
                     LGVITTHYLNLKVMANHTPGILNGSMVFD"
BASE COUNT          803 a          519 c          601 g          691 t
ORIGIN      
        1 agaaaaaatg gatgtatatt cctatcgcta cctgctggat ggaattttat tgctgctaat
       61 tgttattaag acggttcatt ttctaaaaaa caaaaattat aactggaagg gttatcactg
      121 gatctatttc agcgagtaca acataaaggg gtcgacaagc agtgcccgcg gaaaattgaa
      181 gcggagacag aacctcttct cgttaattat tgtaattgtt ctaatcatag atttggtcat
      241 tatgcttctt ttcaagcccc tgtagttgcc gcttcgtttt gtggaacgct ttgccgtaaa
      301 tcattttaca tacgtcgtaa tttttgtcac ttcataactt aaaaaagctg aaaactatga
      361 ccacaaagga aatcgccgac cgccttgttg aactttgcag caaaggcgaa ttcgaaacag
      421 cccagcggga gttacttgca gatgatgcgg taaacattga gccgcatgca acccccgatt
      481 ttccaaaaga gacgcacgga cttcaaaata ttatcgacaa aggccacaag tttgggtcaa
      541 cgatagaaac ggttcacgcc atccacatgt ctcagccgtt gtgtgctggt aattccttcg
      601 ccgttgtttt acatatggat ttgacgatga aagaaaaggg acacatgaac atgtcagagc
      661 tttgcgtgta tacaaccaaa gacggcaaga tagtttcgga gcaattctat atgtaacgga
      721 aaaaactgct aaacactcgc agattttttg ttgatttttc tgaacattgg tattgttcac
      781 attgttttgg attttcgtat ctccttgttg gcacggccgt tgtaatttat aagtaaaatc
      841 caaaaagatg agaacgataa caaagctcgg ctccgttctg gcatttattg caattatggc
      901 ttcttcatgt tcagtggagt atagaacgag gcatagacgg catagagtga tcgaagtcgg
      961 aatgaatgtg aaagataccc aacacacgca ggttgcaaat gctgcggggc aaggcacaaa
     1021 cggtgaaact cctgttgcag ttaaataaaa tgtctccttt ggtgacagtt gcagggcaga
     1081 atgtatcttc tgccctgttt cttttgatta catatgaagc gagacagagc tgcgatcgtt
     1141 aaatcttaca tttgttggaa agagaactac ttttcagatg aaattgtatc ctgagtctgc
     1201 ggaactgcaa ctagaattca gcaaaataaa agacattgtc tcatctcatt gcgaaaccga
     1261 atatggaaaa agcagagttg ccagtcttcg gatccacacg caaaaagaat ttatcactct
     1321 tgaattgcag caggcttttg aatataaaac tcttatagaa aacaagcagg tatttccaaa
     1381 cagttttacg ctgaacgtcg accgtgagct caggatatta agtcttgaag gcggcatctt
     1441 gcatgctgct gactttctga acatccgcag actcgcattg aacgcggata gtattttcaa
     1501 atggtttagt accgaccgac gcatcgcata cccggcgctg gcaagggtaa ttgaacattc
     1561 attttatgaa aaggcgatcg tgaaactgat agatgaaatt tttgatgaaa ccgggaatgt
     1621 aaaggacaat gcaagtgatg cgttgcaaaa gatcaggcaa aatctatatc gaaagcgcaa
     1681 cgaattgcgg cgtgtgtttg aaaaggttgt ggcgaggctt aataaggcag gatacagcgc
     1741 ggaaatagag gaaagtttta gcaacggaag gagagtggtc gctgtgtttt cggaacataa
     1801 gagacaggta aaaggaattc tgcacggcga aagcgacagc cgcaaaacgg ctttcataga
     1861 accggaagaa acgatcgaat taaacaacga agttttctcg cttgagcagg acgaacaaaa
     1921 ggagatcctc cggatactta ggaatttgac cgcagaactt tctgtttata gcggcctgtt
     1981 gtacgcgtgg ctcaccattg ctggcgaata tgattttata aaagcgaaag caaagcttgc
     2041 agtcgacata aaaggtaatt atccgaatct tacagataag gcgatcgttg atttgaagga
     2101 cgcataccat ccgctgctct atctatacaa caagcaatca acacgggcga ccattcccat
     2161 tacgttacgc ctggatgaga ctaatcgtat acttgtgatc agcggaccaa acgccggagg
     2221 aaaaaccgtg acaatgaaaa ccatcgggct taaccagatg atggtacaga gcggtctgct
     2281 cgttcctgta aacccggctt ccgagatggg catcttcaaa caacttttca tccacatcgg
     2341 ggatacacaa agcatagaat ttgaactcag cacttattcg tcgcatttgc tgcacatgaa
     2401 atattttgta gaaaatgcga atggcaagac cctattcttt atcgacgagt tgggcagtgg
     2461 aagtgacccg aatcttggag gcgcatttgc tgaagtgatc cttgacgaac tcaaccggaa
     2521 gcatgcattg ggtgtgatca caacgcatta ccttaatttg aaagtgatgg cgaatcacac
     2581 acccggcata ttgaatggtt cgatggtgtt cgat
//
LOCUS       DASQJI010000653        13568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1622588,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000653 DASQJI010000000
VERSION     DASQJI010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13568
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622588"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VEV83_17600"
     CDS             <1..573
                     /locus_tag="VEV83_17600"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HYK46999.1"
                     /translation="DLGNYIQVSKLGQMMLIVPQIIASVVFPRTASGIDRRMLNNAIL
                     VMARLLSQLYLVVFILIAFTGNWIFVTVFGETFDKMQIPMLVVMPGILALSVLSLLSA
                     FFAGKGKVSVNVRGATYGLICMVVGDYLLVPRYGIIAAAAVSTLSYSVNLSYSLLQFY
                     HDHSISWLDFIKWKKGDYNWLFNILKRDAG"
     gene            576..1751
                     /locus_tag="VEV83_17605"
     CDS             576..1751
                     /locus_tag="VEV83_17605"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK47000.1"
                     /translation="MMKVLWLTSWYPNDLDKWNGDFIQRQAHAAALYCNITVIHVEAD
                     SQGLLQEPLVKKTNSDGNLTETIVLFKPLRSKIAGKILNLKRYATHFKAQVEKYIEEN
                     GPPDIVHVHVAMKAGMIALWIKKKYNIPYVVTEHWTIYQNNSEDAYADRSAMFKRYTR
                     DIFKNAALVLPVSENLGELISRAVTPVAYKRVYNVVDTESFRYDGFREERPFTFIHVS
                     SLNEQKNPEAIIESFVSFHRTYPRSKLIMVGEVQGDLFQNIIQQNLSANAIQFTGMVP
                     YKEVAHLMKNSDAFVLFSRYENMPCVVLEALCCGLAVITSDVGGLKEVINEENGILVK
                     NYANTALTEAMMNLYISYLQFNRQKISSDARTKFSYEMIGKEIHDAYEEVLKKSSEK"
     gene            complement(1728..2012)
                     /locus_tag="VEV83_17610"
     CDS             complement(1728..2012)
                     /locus_tag="VEV83_17610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47001.1"
                     /translation="METLFEAIHVAMPVFHVLMVISLILKIVLMTGFRHFDLPYFVIS
                     YFRFYSETERQMGGNAARRRYVILNNYINIYTYVWIFLCIINILFFGTLL"
     gene            2106..3890
                     /gene="lepA"
                     /locus_tag="VEV83_17615"
     CDS             2106..3890
                     /gene="lepA"
                     /locus_tag="VEV83_17615"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HYK47002.1"
                     /translation="MDKTRNFCIIAHIDHGKSTLADRLLEITKTISERDMMSQVLDDM
                     DLEREKGITIKSHAIQMNYEYRNDQYILNLIDTPGHVDFSYEVSRALAACEGALLLVD
                     ATQGIQAQTISNLYLAIDNDLEIIPIVNKIDMDGAMVAEVKDQIIELIGCKEEEILLA
                     SAKTGAGVNEILAAIVERIPAPKGDPNAPLQALVFDSVFNSFRGIIAYYRIFNGSIRK
                     GDLVEIISTGKEYYADEVGVLKLGLQPADKVMTGDVGYIITGIKNAKEVRVGDTITLA
                     SNPGEAIKGFEDVKPMVFAGIYPISTDDFGELRECMDKLQLNDASLTYELETSQALGF
                     GFRCGFLGLLHMEIIQERLEREFDQTVITTVPNVSFHAYTTSGEELIVNNPAEMPDAT
                     KLSKIEEPFIRAQLISMPGYIGNIMTLCLNKRGILINQSYLTTTRVELIFEMPLTEIV
                     FDFYDKLKSQTRGYASFDYSPIGYREADIVKMDILLNGEKVDALSALIHRSRAQDFGR
                     KLCEKLKELLPRQQFLIAIQAAIGAKIIARENVSAMRKDVTAKCYGGDVSRKRKLLEK
                     QKEGKKRMRQIGNVEVPQEAFLAVLKLD"
     gene            4128..6470
                     /gene="topA"
                     /locus_tag="VEV83_17620"
     CDS             4128..6470
                     /gene="topA"
                     /locus_tag="VEV83_17620"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HYK47003.1"
                     /translation="MAKNLLIVESPAKAKTIEKILGEDFQVKSCYGHIRDLEKDDMGI
                     DINKNYAPRYIVPDEKQKVVKELKQLAKKSDEVWLATDEDREGEAISWHLCEVLGLDP
                     ATTKRIVFHEITKPAIRDAVKRPRTVDMNLVDAQQARRILDRIVGFEISPVLWRKMSM
                     RNSLSAGRVQSVAVRLIAEREREINAFKATSSFKIEAIFNAPDISGRSVNFKAEGGKR
                     KNAEDAESFLNGCIGAAYTVADIQVKPARKSPASPFTTSTLQQEASRKLGYSVSKTML
                     LAQRLYESGYITYMRTDSVNLSDTALQDIHSHVKTQYGDKYLQPRKYKNKNESAQEAH
                     EAIRPTYMDTTSVDDPDSKRLYELIWKRTVASQMADAELEKTIAKISISTNKEELTAQ
                     GEVLKFDGFLKVYIEDKDDEEMSEEESEGMLPPLRVNQSLDLNELKAVERFTRPAPRY
                     TEASLVKKLEELGIGRPSTYAPTISTILKRGYVEKRDKEGVRRDYRVLVLKNDHISKT
                     NEQETTGAERSKLFPTDLGLVVTDFLKEYFADVMDYGFTAKIEEEFDEIADGKKQWTK
                     TIDGFYKPFKKDVEKTLETAERIKGERELGTDPASGKRVVARMGRYGPMVQIGESNEE
                     EKPRFAKLKSHQSIETIGLDEAFELFKLPRNLGTFEDEDVSVGIGRFGPFIAHNKKFY
                     SLNKNMDPYTITLDEAIPLIEEKRKAKDERTIKVFEKEKIQLLRGPYGLYLKQGLRNY
                     KLTKEQQQRAADLTVDEVKQVIEELKANPPQKKAKKKRKA"
     gene            6626..7498
                     /locus_tag="VEV83_17625"
     CDS             6626..7498
                     /locus_tag="VEV83_17625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HYK47004.1"
                     /translation="MRQNSEISALLNLIDDPDEEVFSTVSSRIVGYGKGIIPNLENLW
                     ENTVSEAVQERIEMIIHRLHYTDLVTDLTEWGNSAYHDLLFGALLVARFQYPDLQTSP
                     VIQEIEKIRRNVWLELNSFLTPLEQANVISSIVYNYYNLKGAEVGYTNPDDFFIHKVL
                     QKRKGNTLSNGILYLVLAELLAMPVKAINIPRQFVLAFFNEDYDAATYSGHPQKKIHF
                     YVDATTGQPFTHKDVENYFKRISVPPAPSYFKPINAVKVIQILLQELACCFDSPQKKY
                     KRDELLQLATLLNG"
     gene            complement(7577..8020)
                     /locus_tag="VEV83_17630"
     CDS             complement(7577..8020)
                     /locus_tag="VEV83_17630"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK47005.1"
                     /translation="MITVRQATVDDVALVAPLFNEYRVYYKQASDLESAKIFLQDRLL
                     RNESIVFLALNDGEPIGFTQLYPIFSSVSLKRAWLLNDLFVHESARGNGAGKELLKAA
                     KELGEETDSKFLMLQTQLDNEGAQKLYSSNGWKPLSDMFFQLDLY"
     gene            complement(8021..8434)
                     /locus_tag="VEV83_17635"
     CDS             complement(8021..8434)
                     /locus_tag="VEV83_17635"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYK47006.1"
                     /translation="MKRHATAVWNGSGKEGKGTISSQSGVLSDTQYSYNSRFAEGTGT
                     NPEELVAAAHAGCFTMKLSFVLGEAGFTPERLETTSNINFENGVLTESHLTVKAKVPG
                     ISKEKFDACVKDAEQNCPISKALNMKISSEGNLEG"
     gene            8514..8843
                     /locus_tag="VEV83_17640"
     CDS             8514..8843
                     /locus_tag="VEV83_17640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HYK47007.1"
                     /translation="MISWQDFEKIDIRCGTIIDVKDFTNARKPSWQLTIDFGEFGTRR
                     SSAQIKHYYSKEDLNGKQVIAVVNFPVKQIANFFSECLVLGVYDEKNEVILLQPERKV
                     ANGMKIG"
     gene            8972..9472
                     /locus_tag="VEV83_17645"
     CDS             8972..9472
                     /locus_tag="VEV83_17645"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HYK47008.1"
                     /translation="MTDLYYTYYQSPIGLIKIGGTEHYIAELGFIDRPEQVIHGEPGV
                     SEVMHQCTEQLIEFFSGKRRNFDIPVHQQGTFFQQKVWGELLQIPFGKTISYLELSRN
                     IGDEKAVRAVALTNSKNRIGIIIPCHRVIGSDKSLTGYAGGIWRKKWLLQHEFKIVHG
                     IQTLFS"
     gene            complement(9465..10595)
                     /locus_tag="VEV83_17650"
     CDS             complement(9465..10595)
                     /locus_tag="VEV83_17650"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HYK47009.1"
                     /translation="MKRIFVICLSFLAIFAAKAQNPIYYLLVGTYTDGGAKDGIYVYR
                     FNPNKGEATFVSKTTGVENPSWLCISKDGKFVYAVNENSGDTPGEVSAFSFDKKNGTL
                     TLLNKQPTDGFAPCHIIIDPEGKNVITANYAGGNITVFKTNADGSLQPHAQLVGHEGY
                     GVNVQRQEMPHPHEVVFSPDGKYVFSPDLGNDRLYQYKFNGADAKNVLSENDPPYLTI
                     DDGFGPRHFIFSPDGKNAYLLNELSGQIIVYSYDNGKLTPIQTIASTNAGDKNDRGCA
                     EIGISPNGKFLYTSNRGAANDLSLYKVQTDGTLLENGHQAVGPNPRSFMIDPTGRFLL
                     AASQNGNSIQVFVINKNYGLLQDAGTKIDVQKPVCLQMVPVN"
     gene            complement(10712..>13568)
                     /locus_tag="VEV83_17655"
     CDS             complement(10712..>13568)
                     /locus_tag="VEV83_17655"
                     /inference="COORDINATES: protein motif:HMM:NF014214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M36 family metallopeptidase"
                     /protein_id="HYK47010.1"
                     /translation="NASVIGVSLSDLSKWRISDSYFDKHANAIYVYLQQTYKGIDIDR
                     AVSVLAFRDEKFITGNLDTIQDFRAVNKDTRTGIDAKTALIKAAQAVNLTVRSAIYPL
                     KTVAETNTYQFDKLGISMADIPVKLIWVRTDENQNNFKLVWQVSILTQINNAFWNVNV
                     DAATGSIQKRQNLTVYEQMSKPIAAPHKIFVFEDDQEKFAHAPQINNSVQDLKSINST
                     KLNVIANPYESIFYTNPGTEVDPWTRNHDQNANTLKWNNDGTSDFKITRGNNVLVQTD
                     LDSNNATAGYSPQSSTNPPDLNFLFTFNPDVDPLEDPSFGEVNLFYWTNLMHDMSYQY
                     GFDEPSGNFQKNNLSRGGDANDFVNVDAQDGGGAGWHINNANFSTPADGSSPRMQMYL
                     WSPSLLKLFVVNSPAGFKGGKPAIESAVSINNKIAVKGPITSNVVIWQDALHPDSSTG
                     CGSAANAAQIAGHIAYIDRGSCNFTVKFLSAQSAGATAIIVGNVAPDDPRYPGDNTGN
                     TLVTMSGTENTIKIPGVFIEYDTAAKLKSYGSGNVNATLQASPKLDGAVDNGVHTHEY
                     THGISNRLVGGRLNVNCLSNSEQMGEGWSDWFAIMMTSNWGTASAGGDHIKTIGNYAA
                     GLDTNFTGIRYYPYSTNFNYDPWTYDSLAKLPTAGDPHTVGEIWCSMLWELTWELVKD
                     YGIGINIFDASETGGNNTALSLVIEGMKQTKCSPGFVDARDGILKADTLLYGGKYSKE
                     IWMAFARRGLGYSANQGKATDTKDGTAAYDVPSVLPVTWGKFTAVKQVTTALLSWSTV
                     QEFNSDKFVVERSSDGRTFNAIGQVKAAGNSSTERSYQFTDQFPVKGNNVYRIKQMDM
                     EGRANLSDLRSLNFSDLRPYITISPNPATNKVTINIPGNDQNVTMRLLSNTGQLIRNL
                     IMTGETLTVDVSMLASGVYNISLDGNGYSTKYKLVIQ"
BASE COUNT         3888 a         2887 c         3144 g         3649 t
ORIGIN      
        1 gacctgggca actatataca ggtttcaaaa ctcgggcaaa tgatgttgat cgttccccag
       61 atcattgcca gcgtcgtgtt cccgcgaaca gcaagtggca ttgacagaag aatgcttaac
      121 aatgcgatcc ttgtaatggc aaggctactt tctcaacttt acctggttgt atttatcctt
      181 attgcgttta caggaaactg gatttttgtg acggtgttcg gagaaacttt tgacaaaatg
      241 cagataccga tgctggtcgt aatgcccggt atcctggcat taagtgtgct ttcattgttg
      301 tcggcttttt ttgctggcaa aggaaaagtg tctgtgaacg ttcgtggagc aacgtacggc
      361 ttgatatgca tggtcgttgg cgattacctg cttgtcccgc gttatggcat aatcgctgca
      421 gcggcagtaa gcaccttaag ctactctgtt aacctcagtt attcgctgct tcagttttat
      481 cacgatcact caataagttg gttggatttt atcaaatgga aaaagggcga ctataactgg
      541 ttgttcaaca ttttaaaacg agatgctggt tgagtatgat gaaagttttg tggcttacaa
      601 gctggtaccc gaatgatctc gataaatgga atggcgactt tattcaacgc caggcgcatg
      661 ctgctgcgct gtattgcaac ataactgtga tacatgtgga agctgactca cagggtcttt
      721 tgcaggaacc gcttgtgaaa aaaaccaact ccgatggtaa cctcacggaa acaatagttt
      781 tattcaaacc gcttcgttca aaaattgcag gcaaaatttt aaaccttaaa cgctatgcaa
      841 cacattttaa agcacaagta gaaaagtaca tcgaagaaaa tggcccgccg gatattgtgc
      901 atgtgcacgt ggcgatgaaa gccggcatga tcgcactgtg gataaaaaag aaatataaca
      961 ttccttatgt tgtaactgaa cattggacga tctatcaaaa caattcggaa gacgcatacg
     1021 ccgaccgcag cgcaatgttt aaaagatata cgcgggatat atttaaaaat gcagcgctcg
     1081 tgttgccggt gagtgaaaac ctcggtgaat tgatttcgag agcggtcaca cctgttgctt
     1141 acaaacgcgt gtacaatgtt gttgataccg aaagttttcg ttacgacggc tttcgcgaag
     1201 agcggccatt cacctttata cacgtttctt ctctcaacga acagaaaaat cctgaagcga
     1261 tcatagaatc ttttgtttcg tttcacagaa cctatccacg ttcgaagttg ataatggtcg
     1321 gagaagtgca gggcgacctt tttcaaaaca ttatacagca aaacctttca gccaacgcca
     1381 ttcagttcac aggcatggtg ccttacaagg aagtagcgca tttaatgaaa aatagcgacg
     1441 cttttgtttt gttctctcgc tacgaaaata tgccatgcgt ggttcttgag gcattgtgtt
     1501 gtggtttggc tgtgataact tctgatgttg gcggattgaa agaagtgatc aatgaagaaa
     1561 atggtatcct cgttaaaaat tatgcgaaca cagctttaac ggaagccatg atgaacttat
     1621 acatttctta cctgcagttt aaccggcaaa aaatatcctc cgatgcgcga acaaaatttt
     1681 cttacgagat gatcggtaaa gagatccatg acgcgtacga agaagtacta aagaagagtt
     1741 ccgaaaaata agatgttgat aatacacaga aagatccaga cgtaggtata tatattgatg
     1801 tagttattca ggataacgta gcggcgtcgt gccgcgttac cgcccatctg gcgttccgtc
     1861 tcactataaa aacggaaata gcttatgacg aaataaggaa gatcaaaatg cctgaacccg
     1921 gtcatcaaaa caattttaag tatcaaactg atcaccatca acacgtgaaa gaccggcatt
     1981 gcaacatgaa tcgcttcaaa taaagtttcc atgtttgtgg attgctttgg cttgaatatt
     2041 aggttaacaa ctaacggggc cgaaggtacg ggattaagat caaccaatta ttatctttgt
     2101 cgcaaatgga taagaccagg aatttttgca taatcgcaca tatagatcac gggaaaagta
     2161 cgttggcaga tcggttactg gagatcacga agaccatcag tgaaagagat atgatgagcc
     2221 aggtgctcga tgacatggac ctcgaacgcg aaaagggcat tacgataaag agccacgcga
     2281 tccaaatgaa ttatgagtac aggaatgacc aatatatcct gaatcttatc gacacacccg
     2341 gacacgtcga cttcagttat gaagtgagtc gcgccctcgc agcctgtgag ggcgcgctgc
     2401 tgttggttga tgcaacacag gggatccagg cgcaaactat cagcaacctc taccttgcca
     2461 tcgataacga tcttgaaata attcctatcg tgaacaagat cgacatggat ggtgcgatgg
     2521 tggcagaagt gaaagaccag atcattgaat taataggctg caaagaagaa gagattttgt
     2581 tggcaagcgc aaaaacagga gcgggcgtga atgagatcct ggctgcaatt gttgaaagga
     2641 tccccgctcc aaaaggtgat ccgaacgctc ctctccaggc tttggtgttt gacagcgtgt
     2701 tcaatagttt tcgtggaatt attgcctatt acaggatttt taatggctcc ataagaaaag
     2761 gcgacctggt ggaaattatt tcaacaggaa aagaatatta cgccgacgaa gtaggtgttt
     2821 tgaaattagg acttcagcca gcggacaagg taatgaccgg cgatgttggt tacataataa
     2881 ccggaataaa aaatgcaaaa gaggtgcggg tgggtgatac cattacgctt gcttcaaacc
     2941 ctggcgaagc cataaaaggt tttgaagacg taaagccgat ggtgtttgcg ggcatttacc
     3001 caatctcgac agacgatttt ggagaactgc gtgagtgcat ggacaaactg cagctgaatg
     3061 acgcatcgct cacgtatgaa ctcgagacat cgcaggcttt aggtttcgga tttcgctgcg
     3121 gcttcctggg tttgctgcac atggaaataa tccaggagcg gttggagcgc gagtttgatc
     3181 aaaccgtgat cacaactgtg cccaacgtaa gcttccatgc atataccacg agcggcgaag
     3241 aattgatcgt aaacaatcct gcagaaatgc cggacgcgac aaagctttcg aaaatagagg
     3301 agcccttcat ccgcgcgcaa ctcatctcaa tgcctgggta catcggcaat atcatgacct
     3361 tgtgtttaaa caagagaggc atcctgatca atcaatctta ccttacgaca acgcgtgttg
     3421 agctgatatt tgaaatgccg ttgacagaga tcgtgtttga tttttatgac aagttgaaaa
     3481 gccagacacg tggctatgct tcatttgatt attcaccgat aggttatcgc gaagcggata
     3541 tcgtgaagat ggatatctta ttgaacggag aaaaagttga tgcgttgagt gcgctcatcc
     3601 atcggagcag ggcgcaggat tttggaagaa agctttgcga aaagctaaaa gaacttttac
     3661 cacgtcagca attccttatc gcaatacaag cggctatcgg cgcaaagatc attgcgcgtg
     3721 aaaacgtcag cgcgatgcgc aaagacgtga ccgcaaaatg ttacggtggt gacgtcagcc
     3781 gtaaacggaa attgcttgag aaacaaaaag aaggaaaaaa acgaatgagg cagataggaa
     3841 acgtggaagt tccgcaagaa gctttcctgg ctgtcttgaa attagattaa ttacacgatc
     3901 ttttacccga acgtgtgttc tcatgcctgc gagcgaatgt taaatcagca cttgcgaatt
     3961 tagtgccttt ccccgaggag cgtttttggc ttttcgcaac tttaatttgt ttgaactaat
     4021 attgcagcga ttgaacttgt gctgcagtgt gggaattatt attgagattg tgacgaagaa
     4081 ctgataattg cactgtgttg taatcaaaag caaaatcaaa cacctggatg gcaaagaatt
     4141 tattgatcgt agaaagtccg gcaaaagcga aaaccattga aaaaattttg ggtgaggatt
     4201 ttcaggtgaa gagttgttac ggccatatcc gcgacctgga gaaggacgat atgggcattg
     4261 atataaacaa gaactatgca ccgcgatata ttgttcctga cgaaaaacaa aaagttgtaa
     4321 aagagctcaa gcagcttgca aaaaaatctg acgaagtgtg gctcgcaaca gatgaagaca
     4381 gggaagggga agctattagc tggcatttat gtgaggtact cggccttgat cctgcaacaa
     4441 caaagcgcat cgtttttcat gagataacaa agccggcaat aagagatgct gtaaagcggc
     4501 cgcgcacggt tgatatgaac ctcgtggatg cgcagcaggc aagaaggata ttggacagga
     4561 tcgtcggctt tgagatcagc ccggtgctgt ggcgcaaaat gagtatgcgc aattcgctaa
     4621 gcgcgggaag ggtgcaaagt gtcgcggtgc gtcttatcgc ggaaagagaa agagagatca
     4681 atgcttttaa ggcgacaagc agttttaaga tcgaggcgat atttaatgcg cctgacatat
     4741 ccggccgcag tgtaaatttt aaggcagagg gcggcaaacg taaaaacgcg gaagacgcag
     4801 agagcttcct gaacggttgc atcggtgcgg catacactgt tgctgatata caggtgaaac
     4861 ccgcacgtaa atctcctgcg tctccattca ctacttcaac gctgcagcag gaagcaagcc
     4921 gcaaacttgg atacagcgtt agcaaaacaa tgctgcttgc tcaaagatta tacgagagcg
     4981 gttacattac ctacatgcgt acggacagcg tgaacttgag cgacaccgct ttgcaggaca
     5041 ttcattcgca cgtgaaaacc cagtatggcg ataaatacct gcaaccgcgc aaatacaaga
     5101 acaagaatga gagcgcgcag gaagcgcatg aggcgatccg ccctacgtat atggatacta
     5161 cctcagtgga tgatccggat tcaaagcgtt tatacgaatt gatatggaaa cgaactgtcg
     5221 cgagccaaat ggcagatgca gaactcgaaa aaacgatcgc taaaatttct atttcaacaa
     5281 ataaggaaga actaacggca caaggtgagg ttttaaaatt tgatggtttc ctgaaagtct
     5341 atatcgaaga caaagatgat gaggagatgt ctgaagaaga atctgaaggc atgttgccgc
     5401 cattacgcgt gaaccaatcg ctggatctga acgagcttaa agcggttgaa cgttttaccc
     5461 ggccggctcc ccggtacacg gaagcatctc tcgtgaagaa gttggaagag ctcggtattg
     5521 gacgaccctc aacgtatgcg ccaacgatct cgacaatatt aaaaagaggt tatgttgaga
     5581 agcgcgacaa ggaaggcgtt aggcgtgatt atcgtgtgct tgtgctcaaa aatgatcaca
     5641 tctcgaaaac caatgagcag gaaacaacgg gtgctgaaag gtctaaattg tttccgaccg
     5701 atctcggact ggtcgttact gattttttga aggagtattt tgctgatgta atggattacg
     5761 gattcaccgc gaagatcgaa gaagagttcg atgagattgc agacggaaaa aaacaatgga
     5821 caaaaacgat tgatggtttt tacaaaccgt tcaagaaaga tgtcgagaaa acgctcgaaa
     5881 cggcggagcg aataaaaggt gaacgggaat tgggcactga tccggcgtca gggaaacgtg
     5941 tagtggcccg catgggacgc tacggtccga tggtgcaaat aggagaatcc aatgaggaag
     6001 aaaaaccgcg ttttgcaaaa ttgaaatcac accagagtat tgagacgatc ggtcttgatg
     6061 aagcgttcga attgtttaag cttccgcgca accttggtac gtttgaagat gaagacgtaa
     6121 gtgttggcat tggacggttc gggcctttca tagcacacaa caaaaaattc tactcactta
     6181 acaagaatat ggatccttac actatcacgc ttgatgaagc gataccgctg atagaagaaa
     6241 aacgtaaggc aaaggatgag cgtaccatta aagtatttga aaaggaaaag atacaactct
     6301 taagaggccc atatggcctt tacctaaaac aaggcctgcg aaattacaag ctcacaaaag
     6361 aacaacaaca gcgcgcggca gatctaaccg tcgatgaagt aaaacaggtg atcgaagaac
     6421 tgaaagccaa tcctcctcag aagaaggcga aaaagaaaag gaaggcttga gatacctgga
     6481 gtgagtcgcc tacgtattaa taagataaat tgatggtgaa cgcaaatgca atttgggcat
     6541 aaaaaatgcg ttttatttta tgcacactac tgtgataaaa atttgatacg ttcgatcaaa
     6601 aagtaattag tttgtgtaag attttatgcg tcagaactct gaaatatctg ctttattaaa
     6661 cctgatcgat gatcctgatg aggaagtgtt ttcgacggtg agcagtcgca tcgttggata
     6721 cgggaagggg atcataccta accttgaaaa tctgtgggag aacacggtga gcgaggcggt
     6781 gcaggaacgc atagagatga tcattcacag gctgcattac actgatcttg tcacggacct
     6841 aacagagtgg ggtaacagcg cttatcacga cttgctgttt ggggcattac tggttgccag
     6901 gtttcagtat cctgacctgc aaacttctcc ggtaattcag gagattgaaa aaataagacg
     6961 caacgtgtgg cttgaattga acagctttct tacgcccctt gaacaggcga acgttatttc
     7021 cagcatcgtc tataattatt ataatttgaa aggcgcagaa gtaggatata ccaatccgga
     7081 tgattttttt attcacaagg tgcttcaaaa aagaaaaggt aacactttgt caaatggcat
     7141 tttgtacctc gttctcgccg aactcctcgc catgccggta aaggctatca atattccgcg
     7201 gcagtttgtt ctcgcctttt ttaatgaaga ttatgatgcg gcgacttaca gcgggcatcc
     7261 gcagaaaaag atacattttt atgtagacgc gaccaccggg caacccttca ctcataagga
     7321 cgttgaaaat tatttcaagc gaatttctgt tccgcctgca ccatcatact ttaagccaat
     7381 caacgccgta aaggttatac aaattcttct gcaggagctc gcgtgttgtt ttgactcacc
     7441 gcaaaaaaaa tacaagcgcg acgaactgtt acagcttgcc actttgctga acggatagtt
     7501 aggcaaattg cgattgcaga ttgcagagtg cggatccaat atacaattcc cgattcctca
     7561 tccgcctttc agcatctcaa tacaaatcca gttgaaagaa catatcgctt aacggtttcc
     7621 acccgttgct actgtacaac ttttgcgctc cttcattatc gagttgcgtc tgcagcatca
     7681 aaaatttact gtcagtttct tcgccaagtt cctttgctgc tttaagtaat tccttccccg
     7741 cgccgttgcc acgcgcagat tcatgaacaa aaagatcatt caaaagccac gctcttttaa
     7801 gcgaaaccga gctgaagatc gggtatagtt gagtaaagcc aatcggctca ccatcattta
     7861 gcgcaaggaa cacaatcgat tcgtttcgca gaagtcgatc ctggagaaaa atttttgcag
     7921 attcaagatc ggatgcctgt ttataataga cgcgatattc gttgaagagc ggcgcaacta
     7981 aagcaacgtc atcaacggta gcctgcctta ccgttatcat ttatccttcg agattacctt
     8041 ctgaggaaat tttcatgttc agcgctttgc tgatcggaca attctgttcc gcatctttta
     8101 cgcaagcatc gaatttttct ttgctgatgc caggcacttt tgctttcacc gttagatgtg
     8161 attcggtcaa aacgccgttt tcaaaattta tatttgaggt tgtttctaac cgttctggtg
     8221 taaagccagc ttctcctaac acgaaactca gtttcatcgt aaaacatccg gcatgcgcgg
     8281 ctgcaaccag ctcttccggg ttcgtaccag tgccttccgc aaacctggag ttgtaagaat
     8341 attgagtgtc gctgagtacc ccgctttgag agctgatcgt tcctttgcct tctttccccg
     8401 agccgttcca aacggcagtt gcgtgtcgtt tcatacaatg ttgttttttg tttttaaatt
     8461 acaagctgtt tgagaacgca aattgaaaac aaaattcact aataacaaaa tgtatgatca
     8521 gttggcagga tttcgaaaaa attgacattc gctgtggcac catcatcgac gtaaaagatt
     8581 tcaccaatgc gagaaaacct tcctggcaat tgacaataga ttttggtgaa ttcgggactc
     8641 gaagatcgtc ggcacaaata aaacattatt atagcaaaga agatctgaac ggcaaacaag
     8701 tgattgccgt agtaaacttt cccgtaaaac aaatagcaaa ttttttcagc gaatgcctcg
     8761 tgcttggagt atacgatgaa aagaacgagg tgatcttatt gcaaccagaa cgtaaggttg
     8821 cgaacgggat gaagatcggt tgatggatca ttcttgagag ttgacagatg acggttgaca
     8881 gttcgaggtt tgaagtttga gatttgaagt tggaggttca tggttgtcga ttcaccattc
     8941 acaattcaca attcacaact cccattcacc attgacagac ctctattata catattatca
     9001 aagcccgatc ggtttgatca agatcggtgg caccgagcat tatattgctg agttagggtt
     9061 tattgaccgg cccgaacaag tgatccacgg cgaaccgggt gttagcgagg tgatgcatca
     9121 atgcactgaa caactgatcg aatttttcag cggaaaacgc cggaattttg acattcctgt
     9181 ccatcaacag ggtacttttt ttcaacagaa agtgtggggc gagttgttgc agatcccctt
     9241 tgggaagacg atctcgtacc ttgaattaag caggaatatt ggtgacgaaa aagcggttcg
     9301 tgcggttgct ttaaccaata gcaaaaacag gatcggcatt atcatcccgt gtcaccgcgt
     9361 tattggaagc gataaaagct taacagggta tgcaggaggc atctggcgaa aaaaatggct
     9421 gctgcaacat gaatttaaga tcgtgcacgg aatacaaacc ctttttagtt aacaggcacc
     9481 atctgcaaac aaaccggctt ttgaacgtcg atctttgtgc ctgcgtcctg gagcaaacca
     9541 tagtttttat tgatcacgaa gacttggata ctgttgccat tttggctcgc agccaacaaa
     9601 aaccgaccgg ttggatcgat cataaaactg cgcgggttcg gaccaacagc ctggtgtccg
     9661 ttctccaaaa gcgtgccgtc ggtttgtacc ttatataatg aaagatcatt cgcagcaccg
     9721 cgattgcttg tatacaaaaa cttgccgtta ggagagatcc cgatctcagc gcatccgcga
     9781 tcatttttgt ctcccgcgtt tgtggatgct atagtttgaa tgggtgttag cttcccgtta
     9841 tcataactgt aaacaatgat ctggcctgac agctcattca ataaataggc atttttcccg
     9901 tccggactaa aaatgaaatg acgcggcccg aagccatcgt ctatcgtcag ataaggcgga
     9961 tcgttttcgg aaagaacatt tttagcgtcg gcaccgttga atttgtattg atataaccgg
    10021 tcgttcccaa ggtccggcga aaaaacatat tttccatcag gggagaacac aacctcatgt
    10081 ggatgtggca tttcctgtct ttgcacattt acaccataac cttcgtgccc gacaagttgt
    10141 gcatgaggtt gcagggaacc gtcggcgttt gttttaaaga cggttatgtt accacccgca
    10201 tagtttgcgg tgataacatt tttaccttcg ggatcaatga taatgtgaca cggtgcaaat
    10261 ccatcggtgg gctgtttgtt aagaagcgtc agcgtgccat tctttttatc gaacgaaaat
    10321 gcgctcactt ctccgggcgt gtcgccacta ttttcgttta cagcatatac aaatttgccg
    10381 tccttcgaaa tgcacagcca tgacggattt tccacgccgg ttgttttact cacgaaagtg
    10441 gcttcgcctt tattcggatt gaagcgatac acgtaaattc cgtcttttgc accgccgtca
    10501 gtgtaagttc caaccaataa ataataaata ggattttgcg ctttagcagc aaagattgcg
    10561 aggaaggata aacaaataac aaatattctt ttcatactac cagtgaaaat ttaatggccg
    10621 taaatgtaaa aaagattggc aaagaaaggt gttaaatgaa agatcccgct aaataagcgg
    10681 gacctttttt gtacctgtaa cgaacaggca gttattgaat aaccaatttg tacttggttg
    10741 aataaccgtt gccatctaag cttatgttgt aaacacctga tgccagcatt gaaacatcaa
    10801 cagttaatgt ttcgcctgtc atgatgagat ttctgatgag ttggccggta ttgcttaaca
    10861 gcctcatcgt cacgttttga tcattgccag gaatgttgat ggttacttta ttggtggcgg
    10921 ggtttggtga gatggttatg taaggcctta agtcagaaaa attaagcgaa cgaagatccg
    10981 ataagttcgc tcttccttcc atgtccattt gtttgatacg gtaaacgttg tttcctttta
    11041 ccgggaattg atctgtgaac tgatatgatc tttcagtcga actgtttccc gcggctttaa
    11101 cctggcctat cgcattaaac gttctgccat cggaacttct ttcgacgaca aacttatctg
    11161 aattgaattc ctggacggtg ctccagctaa gcaaagcggt ggtgacctgt ttcacagcag
    11221 taaattttcc ccatgtaacc ggtaatacgc tgggcacatc gtacgccgcc gtgccatctt
    11281 ttgtatcagt tgcctttccc tggtttgcac tataacccag acctcttctt gcaaatgcca
    11341 tccagatctc cttgctgtac ttacctccgt acaacagcgt gtctgctttc aggataccat
    11401 ctcttgcgtc aacaaaaccc gggctgcatt ttgtttgttt catgccttct atcaccaggc
    11461 tgagtgctgt gttatttcca ccagtttctg atgcgtcgaa aatgttgatc ccaatgccat
    11521 aatctttcac aagttcccag gtaagttccc atagcatgct gcaccagatc tcgccgacag
    11581 tatggggatc tccggcggta ggcagtttcg caagtgagtc gtatgtccac ggatcgtaat
    11641 taaaattggt cgaatacgga tagtatcgaa tgccagtaaa attcgtgtcg aggccggcag
    11701 cgtaatttcc gatggtcttg atatgatcgc cgcctgccga agcggttccc caattggacg
    11761 tcatcattat agcaaaccaa tcgctccacc cttcgcccat ctgctcggaa ttggacaagc
    11821 aatttacatt gaggcgacct cccaccaacc ggttggaaat tccatgcgta tactcatgcg
    11881 tgtggacgcc gttatccacc gcgccatcca gtttaggact ggcctgcagg gttgcattca
    11941 cattacccga accataactc ttaagttttg cagccgtatc atattctata aatacaccgg
    12001 ggatcttgat ggtgttttcg gtgcccgaca tagttacaag cgtgtttccc gtattgtccc
    12061 ccggataacg cggatcatcc ggagctacgt tgccaacaat gattgctgtg gcacctgcag
    12121 attgcgcgct caaaaatttt accgtaaaat tacacgaacc cctatctatg tatgcaatgt
    12181 gcccggctat ttgtgcggcg ttggcagcag agccacaacc tgtgctcgaa tccgggtgaa
    12241 gcgcatcctg ccagatcact acattcgatg tgatcgggcc tttcacggca attttattgt
    12301 tgatacttac agcgctttct atagcaggtt taccaccctt aaaccccgcg ggagaattca
    12361 cgacaaacag tttcaataag gaaggggacc acaaatacat ttgcatgcgc gggctcgatc
    12421 cgtccgccgg tgtcgaaaaa ttggcgttgt ttatgtgcca gcctgcaccg ccaccgtcct
    12481 gtgcatctac attgacgaaa tcatttgcat ctccgcctct gctcaaattg ttcttttgaa
    12541 agttaccgct tggttcatca aagccgtact gatagctcat gtcatgcatc aggttcgtcc
    12601 aatagaacaa atttacttca ccaaatgaag gatcttctaa cgggtctaca tcaggattga
    12661 atgtaaaaag aaagtttagg tccggaggat tagttgaaga ttgtggcgag tatccggcgg
    12721 tggcattgtt tgaatccaga tctgtttgta caagaacatt attgccgcgt gtgatcttaa
    12781 agtcgctggt cccgtcattg ttccatttga gcgtgtttgc attttgatca tgattccgtg
    12841 tccacgggtc aacttcggta cccggattgg tgtaaaaaat gctttcatac ggattagcga
    12901 tcacattcaa tttcgtcgaa ttgatgcttt tcaaatcctg caccgaatta ttgatttgtg
    12961 gtgcgtgcgc gaacttttcc tggtcgtctt caaaaacaaa tattttatga ggagcagcta
    13021 tcggtttgct catttgctca taaacagtca ggttctgtct tttttgaata ctcccggttg
    13081 cagcatcaac attcacattc caaaatgcat tatttatttg agtcaaaatt gacacttgcc
    13141 aaaccagctt gaagttgttt tgattttcgt cggttcttac ccaaattaat tttaccggaa
    13201 tgtcagccat cgatattccg agtttgtcga attgatacgt attggtttca gcaactgttt
    13261 tgagtggata aatggctgac ctcaccgtta aattaacggc ctgcgctgct tttatgagag
    13321 ctgtcttggc gtcgattccc gtccttgtat ctttatttac agcccgaaaa tcctggatgg
    13381 tatcaagatt tccggttata aacttttcgt ctctgaaagc gagcacgctc accgcccggt
    13441 ctatatcaat tcctttataa gtctgctgca aataaacgta tatggcgttc gcgtgtttat
    13501 caaaatatga atcagaaatt ctccatttgc ttagatcgct cagggaaact ccgatcaccg
    13561 atgcattt
//
LOCUS       DASQJI010000654         3029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_701058,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000654 DASQJI010000000
VERSION     DASQJI010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701058"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VEV83_17660"
     CDS             complement(<1..263)
                     /locus_tag="VEV83_17660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HYK47011.1"
                     /translation="MCGIVGYVGSREAYPVILKGLKRLEYRGYDSAGVALLDGGLKLY
                     KKKGKVADLEESLIGENLHGNIGIGHTRWATHGEPSDRNAHPHA"
     gene            313..921
                     /locus_tag="VEV83_17665"
     CDS             313..921
                     /locus_tag="VEV83_17665"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYK47012.1"
                     /translation="MNDSSERLPYVRLEDERVLLRPLEETDYENLLPFAIHERGLWKY
                     SLVRADGEDGLRNYLDIALSEKAAGREFPFIVFDKKENAYAGSTRFYDINFPYKTIQL
                     GYTWYGKRFQGTGLNKHCKFLLLQFAFEELRFERFELRADARNERSIAAMRSIGCKVD
                     GILRSNMPTAEGDVRRDSIVLSILKDEWFNDVREMLRGKLKS"
     gene            1049..1438
                     /locus_tag="VEV83_17670"
     CDS             1049..1438
                     /locus_tag="VEV83_17670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47013.1"
                     /translation="MDKVTGIGGVFIKAKDPKALAKWYQENLGVGFGENSHITFQWTN
                     EHNPSVPGNTVFSFFKEDSDYFNPSESKFMLNFRVKNLHLLLFELKHNGVWVSEKTEY
                     YDYGSFGWIMDPEGNKIELWEPKDEAL"
     gene            1534..2520
                     /locus_tag="VEV83_17675"
     CDS             1534..2520
                     /locus_tag="VEV83_17675"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYK47014.1"
                     /translation="MKYRNLGNTGIQLSAIGLGCMGMSFAYGPRDDKESIATLNRALE
                     LGINFWDTADMYGFGHNEELISQVLVPNRDKIFIATKFGFRLKEDKSGTYFDGSPAYA
                     KQAVERSLQRLKIDTIDLYYSHRVDQNIPVEETVGAMADLVKQGKVKYIGLSEASATS
                     IRKAHAVHPITALQSEYSLMTRDPEGDILDTLRELGITLVAYSPLARGLVTATVTDKN
                     ELAEDDFRRTLPRFHDAHWENNQKLMDEFAAFAQKKNCTPAQLALAWVLAQGDDIIPI
                     PGTKKRKYLEENAGAVDLELNDDDLSEIQALMLKYPDVGQRYSEGSMKLVNK"
     gene            2721..>3029
                     /locus_tag="VEV83_17680"
     CDS             2721..>3029
                     /locus_tag="VEV83_17680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HYK47015.1"
                     /translation="MIITKTEIYKYSIPMVPFTIATGTMNFAQNIFIRIHTDQGITGV
                     GECSAFPMITGETQATCFEMAKDFANLCQNKNPLEIEERMNELHAFTAYNNTIKSAFD
                     M"
BASE COUNT          885 a          628 c          736 g          780 t
ORIGIN      
        1 gcgtgcggat gtgcattgcg gtcactgggc tctccgtgcg ttgcccagcg cgtgtgaccg
       61 atcccaatat tgccatgcag gttttcgccg atcaatgatt cttcaaggtc ggctactttc
      121 cccttctttt tatacagctt gaggccacca tcgagcaaag cgaccccggc gctgtcatag
      181 ccacggtact cgaggcgttt tagtcctttt aaaataacgg gatatgcttc tcttgagccg
      241 acgtaaccaa caattccgca cataataaga tcttttttct ttacaggcta tctttgacca
      301 aagcgcgaaa ttatgaatga ttcatcagaa cgtttgccgt atgttaggtt ggaggatgag
      361 cgcgttttgt tgcggccact tgaagaaacg gattacgaaa atttacttcc ctttgctata
      421 catgaacgcg gcttgtggaa gtattcgctg gtaagagccg atggcgaaga cgggttgaga
      481 aattatttgg atatcgcgct gtctgaaaaa gccgccggga gggaatttcc ttttatcgta
      541 tttgacaaaa aagaaaatgc ttacgccggc agcacgaggt tttatgatat taactttcca
      601 tacaaaacaa tacaactcgg ttatacctgg tacggaaaaa gattccaggg tacaggcttg
      661 aataaacact gtaaattctt attgctgcaa tttgcttttg aagagctacg ttttgaaaga
      721 tttgaattaa gagccgatgc aagaaatgaa cgaagtattg ctgcaatgag atcgatcggt
      781 tgtaaagtcg acggaatttt gcgaagcaat atgcccacgg ccgaaggcga cgtgcgcagg
      841 gattcaattg tgttaagtat tttgaaggat gaatggttta atgatgtaag ggaaatgtta
      901 cggggcaaat tgaaaagttg aagtgtttaa aaagttgcaa agacttttta tttccgctct
      961 ctcccgaata gacatcggga tcgagggggt cagggtgcat ttccctctcc acccgtggac
     1021 agggcgaggg taaggacaaa caactcttat ggataaagta accgggatcg gtggcgtgtt
     1081 tatcaaagcc aaagacccga aagcacttgc taaatggtac caggaaaatt taggcgtcgg
     1141 gtttggtgaa aactctcaca tcacttttca atggacaaat gaacataacc cgtccgttcc
     1201 cggtaacacc gttttttcat ttttcaaaga agacagcgac tatttcaatc cctccgaaag
     1261 caagttcatg ctgaattttc gcgtaaaaaa tttgcacctt ttgttgtttg aactgaaaca
     1321 taacggcgtg tgggtttctg aaaaaaccga gtattacgat tatggaagct tcggatggat
     1381 catggacccg gaaggaaata agatcgagct gtgggaaccg aaggacgaag cgttatgaag
     1441 tagttgacag atgacgattg acagaagagc gctggcgcgc aaatctttaa ttttgagctt
     1501 caattgtcat tttctcacta aaaacttttt gatatgaaat acagaaacct tggaaacacc
     1561 ggcatacaac tttcggcgat tggccttgga tgcatgggca tgagcttcgc gtatggcccg
     1621 cgcgatgaca aagagtccat cgcaacgctt aatcgtgcgc ttgagctcgg aattaatttc
     1681 tgggacacgg ccgacatgta cggcttcggt cataatgaag aactcatctc acaagtgctc
     1741 gttccaaatc gcgacaagat ctttattgca acgaaatttg gattccgttt gaaagaagat
     1801 aagtcgggaa cttattttga cggctctcct gcctacgcga aacaagcagt tgaaagaagt
     1861 ttacaacggc tgaagatcga tacgatcgat ctctattatt cgcatcgtgt ggaccagaac
     1921 attccggtgg aagaaactgt gggagccatg gcggaccttg ttaagcaagg gaaggttaaa
     1981 tacattggct tatctgaagc gtctgcaaca tccattcgaa aagcgcacgc tgtgcatccc
     2041 atcactgccc tgcaaagcga atactccttg atgacgagag atccggaggg agacatcctc
     2101 gatacgttac gtgagctcgg cataacattg gttgcttatt caccgctcgc acgaggtttg
     2161 gtgactgcaa cggtaacaga taagaacgaa ttagcagagg atgatttcag aaggacgctt
     2221 ccgcgttttc atgatgcgca ctgggaaaac aaccaaaagt tgatggatga atttgcagcg
     2281 tttgcacaaa agaaaaattg cactccggcg cagctcgcat tagcgtgggt gttggcccag
     2341 ggcgatgata ttattccaat tcccggcacc aaaaaaagaa aatacctgga ggaaaatgct
     2401 ggagccgtcg atttagaatt gaatgatgat gacctcagtg agatccaggc gttgatgttg
     2461 aaatatcccg acgttggaca acgctacagc gaaggatcga tgaagctggt gaacaagtga
     2521 gatgagtgat gagtgatgaa tgatgagtag tgatcatcga ttatataaag ggtcaactca
     2581 agaaacaaac ctggcaggtt ttgctgtgaa cgtttcaagg acttcgaatg taacctgtca
     2641 ggttctgttt ttaagcgact tttaagccga aagctttttt ccccaaacct ggcaggttaa
     2701 ttcgtcagca tacagttcat atgatcataa ccaaaacaga gatctacaaa tacagcatcc
     2761 ccatggtgcc gttcacaatt gcgacgggca cgatgaattt tgcgcaaaac atatttatcc
     2821 gcatacatac agatcaagga atcaccggtg tcggtgaatg ttcagccttt ccgatgataa
     2881 ccggtgaaac acaagcgaca tgtttcgaaa tggcaaaaga ttttgccaac ctctgccaaa
     2941 acaaaaaccc gctggagatc gaagaacgga tgaatgagtt gcatgctttc accgcctata
     3001 acaacacgat caaaagcgcg ttcgacatg
//
LOCUS       DASQJI010000655         3965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1930688,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000655 DASQJI010000000
VERSION     DASQJI010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3965
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930688"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..656
                     /gene="purE"
                     /locus_tag="VEV83_17685"
     CDS             <1..656
                     /gene="purE"
                     /locus_tag="VEV83_17685"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HYK47016.1"
                     /translation="KIYVCPETFSQLYNNTDALQGSLRVTSLKAEIMSTTENSETEKS
                     KLEFPLVGIIMGSDSDLNVMQDAASILKEFDIPFELTIVSAHRTPLRMVEYATKAAER
                     GLKTIIAGAGGAAHLPGMIASLTTLPVIGVPIKSSNSIDGWDSVLSILQMPNGVPVAT
                     VALNAAKNAGIIAAQIIATSNDELSKKIGDYKKQLEKSVLDKAKNLSNQWLNKFDKK"
     gene            complement(657..2018)
                     /locus_tag="VEV83_17690"
     CDS             complement(657..2018)
                     /locus_tag="VEV83_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HYK47017.1"
                     /translation="MKTFKSIFPYDQSVIAEYPLMPDDEIDNALSFAEIAFYSWSEKT
                     FEERAEVFKKIAQLLRSKKESLAALITNEMGKVTKEAIAEVEKCAAGCEYFAENSEQL
                     LKDQLVESSYKKSFVAFQPIGAVLAIMPWNFPFWQVFRFAAPTLMAGNVALLKHAPNV
                     CGVSLAIQQMFEEAGAERGVFQSLIADVDVTEKVLRSNIVQGVSLTGSERAGSSVASI
                     ASAQIKKSVLELGGSDAFIVLADADLEKAAEVAVASRMQNAGQSCIAAKRFMIVEEIF
                     DSFVDTIKAQFEKLKQGDPRDSSVNIGPMARLDLAEKLNDQMQRSVAKGAVITLGGEV
                     NGCNYQPTLLMKVQQGMAAFDEETFGPLMNVICVKDEDEAIRLANASRYGLGGNIWTK
                     DTEKAVALAKRINSGLVFVNSMVKSEPGLPFGGVKKSGYGRELSNHGILEFVNIKTIA
                     VAE"
     gene            complement(2081..2431)
                     /gene="rnpB"
                     /locus_tag="VEV83_17695"
     ncRNA           complement(2081..2431)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VEV83_17695"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2496..3167)
                     /locus_tag="VEV83_17700"
     CDS             complement(2496..3167)
                     /locus_tag="VEV83_17700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin reductase"
                     /protein_id="HYK47018.1"
                     /translation="MADTHIVTVTDISPRTHNVKTFRVTKPQNFSFAPGQATDLSLNE
                     EGWRDNKHPFTFTCLPEDDYLEFTIKIYENPEGLTHRLGLVQPGAQFEISDAWGAIEY
                     KGEGVFIAGGAGVTPFISIFRSLNKQNAVGNNKLIFSNKTEDDIILKDEFEDILGQNF
                     INVITSQSGTKYYNKRIDTDYLQNNISDFRQHFYVCGPDEFTKNILASLEQLGANADT
                     LIFEK"
     gene            3346..3654
                     /locus_tag="VEV83_17705"
     CDS             3346..3654
                     /locus_tag="VEV83_17705"
                     /inference="COORDINATES: protein motif:HMM:NF020382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhR family protein"
                     /protein_id="HYK47019.1"
                     /translation="MHAQLITYQLNDISQEEYLKQMVQPDAPILANVKGLISKVWLTD
                     EEKNTFGGFYLWESKTAMEDFMRSDLVKAVVSRPFVKNVSSMDFGVNETASLITRGLK
                     "
BASE COUNT         1092 a          907 c          826 g         1140 t
ORIGIN      
        1 aaaagatcta tgtatgcccc gaaacatttt ctcaacttta caacaatacg gacgcgttgc
       61 aaggatcatt aagggtaacc agtttaaaag ccgaaataat gtcaacaact gaaaactcag
      121 aaactgaaaa gtcaaaactc gaatttcctc tcgtgggcat tatcatggga agcgacagcg
      181 atttgaatgt aatgcaggat gctgcttcga ttctgaaaga attcgatatt ccttttgagc
      241 ttacgatagt atccgcgcac agaacgccgt tgagaatggt tgaatatgcg acaaaagcag
      301 cagagcgggg attaaagact atcatcgcag gagcaggagg tgcagcacat ttaccgggaa
      361 tgatcgccag tttaaccacc ctcccggtga tcggtgttcc cattaaatca tcaaactcga
      421 tcgatggctg ggattctgtt ctttcaattc ttcaaatgcc aaatggcgtt ccagttgcca
      481 ccgtcgcttt gaatgcagca aagaacgcgg gcatcattgc ggcgcagatc attgctacat
      541 ctaacgatga attatctaag aagatcggag attataaaaa acaactcgaa aaatctgtgc
      601 ttgataaggc aaagaattta tcaaatcaat ggctgaataa atttgataag aaataactat
      661 tcagcaacag cgatcgtttt tatgttgacg aactcaagta taccgtgatt gcttaactcc
      721 ctgccataac ctgatttctt tacgccgcca aatggcagtc ccggctctga ttttaccata
      781 gaattcacga acaccaatcc actgttaatt cgctttgcaa gcgcgacggc tttttctgtg
      841 tcctttgtcc aaatgttgcc gcccaaaccg tagcgcgatg catttgccaa tcttatcgct
      901 tcgtcttcgt ccttcacgca aataacattc atcaacggac caaaagtctc ctcgtcaaag
      961 gctgccattc cctgctgcac tttcatgagt aaagtaggct gataattgca accatttact
     1021 tccccgccta aagtgatcac cgcacctttt gcaaccgaac gttgcatttg atcgttgagt
     1081 ttttccgcaa gatccaaacg tgccattggg ccgatgttta cagatgaatc ccgcggatcg
     1141 ccttgtttga gtttctcgaa ttgagctttt attgtgtcaa caaaactgtc aaatatctct
     1201 tcaacgatca taaatctttt tgcagcaata caactctgtc ccgcattttg catgcgcgac
     1261 gctaccgcaa cctctgcagc cttttccagg tctgcgtcgg ccaggacaat gaaggcatca
     1321 gagcctccta attctaatac tgattttttt atttgtgctg acgcgatcga ggcaacggag
     1381 ctgccggcac gctcacttcc cgttaaagaa acgccctgaa caatattaga tcttagaact
     1441 ttttcggtga cgtccacatc agcgatgagc gattgaaaga cccctctttc agctccggct
     1501 tcttcgaaca tctgctgtat ggccagcgaa accccgcaaa cattcggcgc gtgtttcaac
     1561 agcgcaacat ttcccgccat caacgttggc gctgcaaaac gaaacacctg ccagaacgga
     1621 aaattccatg gcatgatcgc aagcacggct ccgatcggtt gaaacgcaac aaaacttttt
     1681 ttgtagctgg attcaactaa ttggtctttt aaaagttgtt ctgaattttc ggcgaaatat
     1741 tcacaaccgg ctgcgcattt ttcaacctca gcaatcgctt cctttgtgac cttacccatt
     1801 tcattggtga tgagcgctgc caacgattcc tttttcgatc gcaaaagctg ggcgatcttc
     1861 ttaaaaactt ctgccctttc ctcaaatgtc ttttcgctcc agctataaaa tgcgatctcc
     1921 gcgaaagaaa gcgcattatc tatttcatca tccggcatta aaggatattc tgcaattaca
     1981 gactgatcgt agggaaatat tgacttaaat gttttcatgt gaaacttgaa acattggtac
     2041 caaaatactg gcaggttcct gcctttttga aaatcaaaaa agaactacaa accccgtaag
     2101 ccggatcctg ttttaagcca tcatttatct atgctgccta cccagaagct tggacgggcc
     2161 gccctcaaat gcttctatat gtggcattgc agcacccaag gtttacccgc gatcccggtt
     2221 acccggaaaa gctgtgagct cttacctcac attttcaccc ttacccgttc cgtctccacg
     2281 ggtggagagg gaacgggctg ttattttctg tggtactgtc tctttcttcc gctattcgca
     2341 gaagaagccc cgtttaacac gaggtgagtc gccctgtgct gtccggactt tcctttccga
     2401 taaatatcgg aacgatggcc cgggtttgta gtgaatgcaa atttaataaa attagaccgg
     2461 cgatcattgt ttgattgggt gcaaaaaatc ggattctatt tttcaaagat caacgtgtcg
     2521 gcgtttgcgc caagttgttc gaggctggcc aaaatgtttt tagtgaactc atcgggcccg
     2581 cacacataaa aatgttgcct gaagtcactg atgttgtttt gaagataatc tgtgtcaatt
     2641 cgtttattgt aatatttggt cccgctttgc gaggttatca catttataaa attttgccca
     2701 agtatatctt caaattcatc ttttagaata atatcatctt ctgtcttatt ggagaaaata
     2761 agtttgttat ttccgactgc attttgttta ttcaggcttc tgaagatcga aatgaacggt
     2821 gttacgcctg cgccaccagc tataaaaacg ccctcccctt tatattcgat cgcgccccag
     2881 gcatcgctga tctcaaactg agctcccggt tgtactaacc cgaggcgatg cgtaaggccc
     2941 tccggattct cgtagatctt tatggtaaac tcaagatagt cgtcttcggg caggcaggta
     3001 aaggtgaaag gatgcttgtt gtctctccac ccttcctcgt ttaaagaaag gtccgttgcc
     3061 tgtccgggtg caaaagagaa gttttggggc tttgtaaccc tgaacgtttt cacgttgtgt
     3121 gttcgcggac taatatctgt aacggtaaca atgtgtgtgt cggccataaa gttgttgatt
     3181 gattaaaatc gagcaactaa tttaaataaa aaagttagtt tgaatcacgg cttcacttcg
     3241 tagaatccgt gaaaagtaat gtgtattata aactatgatt ttgtgcattt tccaggttgt
     3301 aaatactttt gctttttgga tcatgattaa cttaaaaata aaataatgca cgcacaactg
     3361 atcacttatc aattaaacga tatttcccag gaggaatatt tgaaacaaat ggttcaacca
     3421 gacgctccaa ttttagcaaa cgtaaagggg ctgatctcaa aggtttggtt gacggacgaa
     3481 gaaaaaaata ctttcggtgg cttctatttg tgggaaagca aaactgcaat ggaagacttc
     3541 atgcgttctg accttgtaaa agcagttgta agcagaccgt tcgtaaaaaa tgtttcttct
     3601 atggactttg gagtaaacga aacagcttca ttaatcaccc gtggactgaa ataaaaggca
     3661 gcattttttg ttggttggca gatttacttc cgttctgcta tgttccggtg gacggaattc
     3721 ttgccgctgt tgtaagccgg tctcgtccaa atataggttt accaaaagtc gcagaaacaa
     3781 ggagcattca attttgcgtc gggatggaac tgaatccagg aaacaggtgc tccacttgta
     3841 ctgaatcgaa aggaggacgc aacacggcat aaaaaagccc cgctctcgtg gggcttcata
     3901 acgttattag cagcagaccg gttcaattga taacgccgcc gtttaatgat cgcacgtctc
     3961 tattg
//
LOCUS       DASQJI010000656        10674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2699230,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000656 DASQJI010000000
VERSION     DASQJI010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10674
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2699230"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2328)
                     /locus_tag="VEV83_17710"
     CDS             complement(<1..2328)
                     /locus_tag="VEV83_17710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HYK47020.1"
                     /translation="MASNSGLYDPSFEHDSCGIGFVANINGSKSHQVISDALTVLENM
                     EHRGACGCENNTGDGAGIMIQTPHEFFVEECLKLGIELPEYARYGVGVLFLPKEEHIA
                     EQCRKFFTQCAEQLNLKIFAFRKVPVNDEDVGFTALSVEPSIEHVFVRCPNHIVDADE
                     FERKLFVLRNYATHFINKKIGKQTVDFYVASLSYKTIVYKGQLTSLQVRRYFKDLTNE
                     KLVSAFGLIHSRFATNTFPSWKLAQPFRFIAHNGEINTLQGNLNWLKSSEKSFTSPYF
                     SKEEMELLLPVVTEGQSDSACIDNMIELLTLCGRSIPHVMMMLIPEAWDQDTQMDATK
                     KAFYEFHSAFMEPWDGPASITFTDGKVIGATLDRNGLRPSRYCVTEDGRVIMASETGV
                     LPVDPALVIEKGRLQPGRMFIVDMEQGKIISDEELKKNICSQRPYADWLNKYKIRLEE
                     LPEPRVTFTQMRHEQAFKYQKAFGYTSEELDNIVAPMAADGKEPVGSMGVDIPLAVLS
                     DQPQHLSSYFKQLFAQVTNPPIDPIRERSVMSLNTFVGNIGNILEEDPLACHSVALRQ
                     PVLTDYELEKIRSIDTGIFQAKTLQCYFRADGKPGSLKAGLNRLCRYAEDAVHDDFKV
                     LILQDRAIDSEHAPIPSLLATAAVHHYLIRKGLRGQVGIIVEAGDIWEVHHFACLVGF
                     GATAINPYLAFASIKDLKENGKLPAHLNDDEVKKNYIKAINDGLLKVFSKMGISTLQS
                     YQGAQIFEILGLNKDVVDEYFTGCTSRIEGMGLDEI"
     gene            complement(2458..3732)
                     /gene="ilvA"
                     /locus_tag="VEV83_17715"
     CDS             complement(2458..3732)
                     /gene="ilvA"
                     /locus_tag="VEV83_17715"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HYK47021.1"
                     /translation="MNTLTDTKSVFDFKAAVERLKHVALKTPLQYNRHLSTRYKCKVY
                     LKREDQQVVRSYKLRGAYNLMKSLPQEQLQKGVVCASAGNHAQGFAYSCRKLNVKGVV
                     FMPVITPNQKLNQTKMFGEDKIEIRLVGDNYDDCALAAKEFTQRNGMTFIHPFDDPRV
                     IEGQATVAIEILEQFYDLSPSGGIDYLFVPIGGGGLSSGVGSYFKTYSPRTKIIATEP
                     EGAPSMFEAFKAGKPVTLENIDTFVDGASVKRSGDLTYSICKDVLDEVHLVPEGKVCS
                     TILKLYTEDAIVAEPAGALAVSALDDFAGEIVGKNVVCIVSGGNNDIDRMQEIRERSL
                     QYEGLKHYFLVRFAQRPGALKEFVNNVLGPDDDITRFEYIQKHNKETGPALVGVELKK
                     REDYDVLLSNLKKSNINYTELNKDDNLFGYLV"
     gene            complement(3755..4852)
                     /gene="ilvC"
                     /locus_tag="VEV83_17720"
     CDS             complement(3755..4852)
                     /gene="ilvC"
                     /locus_tag="VEV83_17720"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004455 - ketol-acid reductoisomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HYK47022.1"
                     /translation="MAKLNFGGVEENVVTREEFPLEKAQEILKDEVVAVIGYGVQGPG
                     QALNQKENGVNVIVGQRKNSKSWEKAVRDGFVPGESLFEIEDALQRGTIICYLLSDAA
                     QIQLWPTVKKHLTPGKALYFSHGFGITYKEQTGIIPPPDVDVFLVAPKGSGTSLRRMF
                     LQGRGLNSSYAIYQDATGRAFERVAALGIAIGSGYLFETNFKKEVYSDLTGERGTLMG
                     AIQGIFAAQYQVLRSKGHSPSEAFNETVEELTQSLMPLVAENGMDWMYANCSTTAQRG
                     ALDWWKRFRDVTLPVFNELYESVAAGKESQRSIDSNSQPDYREKLEAELKELRESEMW
                     QAGKTVRSLRPENQKPAEEVSKKKSVEEPVA"
     gene            complement(4937..5575)
                     /gene="ilvN"
                     /locus_tag="VEV83_17725"
     CDS             complement(4937..5575)
                     /gene="ilvN"
                     /locus_tag="VEV83_17725"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HYK47023.1"
                     /translation="MSDQKNKSTGSNAHSVAGKKEFTITVYTENQIGLLNRIAIIFTR
                     RKINIDSLNTSPTEVESVHRFTIVINETEDVVRKLCRQIEKQVEVLKAYYNTNEEIVW
                     QELALYKVPTDVIAEEVQVERLLREHGASAVVIRKDYTVFEVSGHREETDNLIKVLEP
                     FGLIEFVRSARVAIIKNSDGFHSKLKEFEYTAPGETVIENEYLNQQDEVFTM"
     gene            complement(5616..7382)
                     /gene="ilvB"
                     /locus_tag="VEV83_17730"
     CDS             complement(5616..7382)
                     /gene="ilvB"
                     /locus_tag="VEV83_17730"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HYK47024.1"
                     /translation="MQTLEIEKKKSKKQGEFKAAPQAAEGISISGSEAVLKALVAEGV
                     ETIFGYPGGAIMPIYDALYDYHDQLKHILVRHEQGAIHAAQGFARTSGKTGVVFATSG
                     PGATNLVTGLADAMIDSTPVVCITGQVYAHLLGTDAFQETDVINITTPVTKWNYQVTD
                     ATEIPSVLARAFYIAGSGRPGPVVIDITKNAQLQKFDFTEYKKCDHIRSYRPKPIIRK
                     KYIEQAAQLINAAEKPFIIFGQGVILGRAENEFKKFIEKSGIPAAWTILGLSALPSDY
                     PLNVGMLGMHGNYGPNVLTNECDVLVAIGMRFDDRVTGRLDKYAKQAKIIHLDIDPAE
                     IDKNVKTTVPVWGDCKETLPLLTELIDQKSYPEWLAKFKEYKKQEEEVCIDIEMHPSN
                     EEISMAEVIDALNEITGGDAVIVTDVGQHQMVTCRYARFNESKSNVTSGGLGTMGFAL
                     PAAIGAKFGAPHRTVVAIIGDGGIQMTIQELGTIMQSEVNVKILILNNNFLGMVRQWQ
                     QLFHDKRYSFVDITSPDYVQVAKGYHIEGQSVSERAEIKSALQTMLSHEGAYLLEIMV
                     GKENNVFPMVPQGCSVAEIRLK"
     gene            complement(7434..7931)
                     /locus_tag="VEV83_17735"
     CDS             complement(7434..7931)
                     /locus_tag="VEV83_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK47025.1"
                     /translation="MTKNYFIQLSGYNIWANDIVCGWLEKISDGQWTQTVTSSFNSIR
                     ETMLHVAAAEHIWLQRMIKEPNQVWLQSTFTGTKDEHIELWKSTSAALKDFLESFDEN
                     RLPTNLDFKRLNGDPYSMPYYELLAHIFNHSTYHRGQLVTMLRQVGFNDVASTDLLGY
                     YREYF"
     gene            complement(7928..8686)
                     /locus_tag="VEV83_17740"
     CDS             complement(7928..8686)
                     /locus_tag="VEV83_17740"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK47026.1"
                     /translation="MKKSGTALMIIVSCFASAIGHTQDIITKYFDSSWRETGKGSPYF
                     YYTTFEKQDTGYRVTSYWSQSNKITAVSVYADTNFRKGIGLSKGYYESGVLKDSFYFD
                     DKGGIQVGYHYHESGRLDFSYHHDATNGGLIGERYDSTGKKVPGYFTYQKEAMFPGGA
                     DGWIEYLQAHLKANTPAKKKAPVGRYTVTITFLVDKNGKVTEVEALNDPGYGTAEEAV
                     RVVQHSPAWIPAIQNDKPVNYRQKENITFEVTEK"
     gene            complement(8706..10451)
                     /gene="ilvD"
                     /locus_tag="VEV83_17745"
     CDS             complement(8706..10451)
                     /gene="ilvD"
                     /locus_tag="VEV83_17745"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HYK47027.1"
                     /translation="MNSIMINNKVFHSPSGDGGGGFELNKYSKTLTQDETQPAAQAML
                     YAIGFKEEDFKKAQVGIVSMGWDGNPCNMHLNDLSTTVKKSVNDVEGLIGLRFYTIGV
                     SDGISMGTDGMRYSLVSRDVIADSIETNAGAQYYDAIIAIPGCDKNMPGCIMAMGRLN
                     RPAIMMYGGTIAAGHYNGEELNIVSTFEALGQKIMGKLDEETFKNIVRNACPGAGACG
                     GMYTANTMASAIEALGMSLPNSSSNPALSEDKQKECASIGAAIKLLMEKDIKPRDIMT
                     RKAFENAITVVMVMGGSTNAVLHLIAMAKSVGVKLTLEDFQAISNRTPMLADFKPSGK
                     YMMEDLHKYGGVPAVMKYLLGKGLLHGECLTVTGNTVAENLANAVDLDFAKQDIIHPI
                     ENPIKATGHLQMLYGNLAEGGSVAKITGKEGERFEGTARVFEGEKHLIEGLQSGRVHA
                     GDVVVIRHIGPKGAPGMPEMLKPTGAIIGAGLGKSVALITDGRFSGGTHGFVVGHITP
                     EAFEGGLIALVHDDDIIEIDAVKNTINLRVSEAEIARRRQNWKRPELKEKKGVLYKYM
                     LSVKNASEGCVTDEA"
BASE COUNT         2603 a         2643 c         2130 g         3298 t
ORIGIN      
        1 tatctcatcc aaacccattc cttcaattcg tgaagtgcat ccggtaaagt attcgtcaac
       61 cacgtctttg ttcagtccaa gtatctcaaa gatctgtgcg ccctggtaag attgcagcgt
      121 tgagattccc atctttgaga acactttcag caacccatca ttgatcgcct tgatataatt
      181 cttcttcacc tcatcatcat taagatgtgc aggcaacttt ccgttttctt tgaggtcttt
      241 gatagaagcg aaggctaagt aaggattgat ggctgttgca ccaaaaccaa ctaagcaggc
      301 aaaatgatgc acttcccaaa tatctcctgc ttcaacaatg atcccaacct ggccacgaag
      361 gcctttgcga ataagatagt gatgcacggc tgcagtggca agcaaagaag gaattggcgc
      421 atgctcagaa tctatcgccc tgtcctggag tatcaatacc ttaaaatcat catgcacggc
      481 atcctcagcg tatcggcaaa gcctgttcaa acctgctttt aaagagccgg gttttccgtc
      541 agctctaaaa taacattgta aggttttcgc ctggaagatt ccggtatcaa tgctgcggat
      601 cttttccagc tcatagtccg tgagcaccgg ttgccgcaag gccacactat gacaagccaa
      661 cggatcctcc tccaagatat tcccaatgtt gccgacgaat gtgttcagtg acatcacaga
      721 cctttcgcgg atcggatcta ttggaggatt tgttacctgg gcaaatagtt gcttgaagta
      781 cgagctcaaa tgttgcggct gatcgctgag cacagcaagt ggaatgtcta ctcccattga
      841 gccaacgggc tcctttccat ccgctgccat cggcgcgact atgttatcta attcttccga
      901 tgtgtatcca aatgcttttt gatatttaaa cgcctgttca tgccgcattt gtgtgaacgt
      961 cacgcgcggc tcaggcagct cttccagtcg tatcttgtat ttgttcagcc aatccgcata
     1021 gggtctttgc gagcaaatat tttttttcag ttcttcatcg ctgatgatct ttccctgttc
     1081 catgtcaacg atgaacatcc ttccgggttg taatcttcct ttctcaatta cgagtgcagg
     1141 atcaacaggc agaacgccgg tttctgaagc catgataaca cggccatctt ccgttacgca
     1201 gtagcgcgaa gggcgtaatc cattgcggtc taaggtcgct ccgatcactt ttccatctgt
     1261 aaaggttata gaagccggac cgtcccacgg ctccatgaag gcagagtgaa attcgtaaaa
     1321 tgctttttta gtcgcatcca tttgagtatc ctggtcccat gcttcgggta tcagcatcat
     1381 catcacgtgc ggtatggatc ggccacacaa tgttagcagt tcgatcatgt tgtcaataca
     1441 cgcagaatca gattggcctt ccgttacaac aggcaggagc aattccattt cctctttcga
     1501 aaaataagga gaagtaaatg atttttcgct cgattttagc cagttcaaat tcccctggag
     1561 ggtatttatc tcgccgttat gcgctataaa tctgaacggc tgagcaagct tccacgacgg
     1621 gaatgtattt gtagcaaaac gcgaatggat caatccaaat gcacttacca gtttttcatt
     1681 ggtgagatcc ttgaaatatc ttctcacctg caaactggtt aattgtcctt tatagacaat
     1741 agttttgtaa gaaagggaag caacgtaaaa atcaaccgtt tgtttgccaa tttttttatt
     1801 tatgaaatga gttgcgtagt tacgtaatac aaaaagtttt ctttcaaatt cgtcggcatc
     1861 gacgatgtga ttggggcacc ttacgaagac gtgttcgatt gacggttcta cactgagtgc
     1921 tgtaaatcct acatcctcat cgttaaccgg aacttttctg aaggcgaaga tttttaaatt
     1981 gagctgctca gcacattgcg taaaaaattt gcggcactgt tcagcgatgt gctcttcctt
     2041 tggcaagaaa agaacaccca ctccgtacct ggcatattcc ggtaattcaa ttcccagttt
     2101 caaacattct tcaacgaaaa attcgtgagg cgtttggatc atgatacccg caccatcacc
     2161 cgtattgttt tcgcaaccgc atgcgccacg atgctccatg ttctcgagta cagtaagtgc
     2221 atcagaaatt acctggtggg atttgcttcc attgatattg gctacaaagc caattccgca
     2281 ggaatcatgt tcgaacgaag gatcgtataa acccgagttg cttgccataa tacattatgc
     2341 atttatcaaa aaaattcagt tttattccgt cttatggcag gcaggcgttc aagatagcga
     2401 attcaattgt aaacagccgt tagtttattg agcaaatttt tcacaatagt tcacaactta
     2461 caccaggtag ccaaacagat tatcgtcctt atttaattca gtatagttga tgttagattt
     2521 tttaaggttg gagaggagca cgtcgtaatc ttctcttttt ttcaattcca cgccgacgag
     2581 tgcaggcccg gtttccttgt tatgtttttg aatgtattcg aaccgggtga tgtcatcgtc
     2641 aggacccaat acattgttga caaactcctt caatgcaccc ggacgttggg caaagcgaac
     2701 gaggaaataa tgtttcaggc cttcgtactg tagcgagcgt tcccttattt cctgcatgcg
     2761 gtcaatatca ttgtttccgc cgctaactat gcagaccaca ttcttgccaa cgatctcgcc
     2821 ggcaaaatca tccagcgcgc ttaccgccag agcacctgcc ggctccgcaa cgatggcatc
     2881 ttcggtatac aatttcaaaa tggttgagca gaccttgcct tcgggaacga gatgcacttc
     2941 atcgagaaca tctttgcaaa tagaatacgt gagatctccc gaacgcttta ctgatgcgcc
     3001 atcaacaaac gtgtcaatat tttcaagcgt gacaggtttg cctgctttga aagcttcaaa
     3061 catggaagga gctccttccg gttcggtcgc aatgatcttt gttctcggcg aatacgtttt
     3121 gaaataagag ccgacgcctg aagaaaggcc gccaccgcca atcggaacaa acaaataatc
     3181 aatgccgccg gagggtgaca ggtcataaaa ctgttctaat atctcaatag ctacggttgc
     3241 ctggccttct ataacacggg gatcatcaaa aggatgaatg aatgtcattc cgttcctctg
     3301 tgtaaattct ttcgccgcca gcgcacagtc gtcgtagttg tcgccgacaa gccttatttc
     3361 gatcttgtct tcgccaaaca tttttgtctg attgagtttt tggtttggcg taatgacggg
     3421 catgaacacg acgcctttca cgttcaactt cctgcaactg tatgcaaaac cctgcgcatg
     3481 attgcctgca ctcgcgcaca cgacgccttt ttgcagttgt tcctgcggca ggcttttcat
     3541 aagattatat gcgccgcgta atttatagga gcgaacgacc tgctggtcct cgcgtttcag
     3601 gtaaactttg cacttatacc tggtggataa atgacggttg tattgcaacg gcgttttcag
     3661 agccacatgt tttagcctct cgaccgctgc tttgaaatcg aaaacagatt tcgtatctgt
     3721 gagtgtgttc atcaatgatt ttttaccggt ggtattatgc tacaggttct tcgacggatt
     3781 tcttttttga cacttcttca gccggctttt gattttccgg ccgcaggctg cgcacggttt
     3841 tacctgcctg ccacatttca ctttcgcgca attcttttaa ttctgcctcc agcttttccc
     3901 ggtaatcagg ttgtgagttg ctgtcgatgc tccgctgaga ttctttgcct gctgcaacac
     3961 tttcatatag ctcgttgaag acgggcaacg ttacatctct gaatcttttc caccaatcca
     4021 atgctccgcg ttgcgccgta gttgagcaat ttgcatacat ccaatccatt ccgttttccg
     4081 ctacgagtgg cattaaagat tgcgtcaatt cctcaacagt ttcgttgaat gcttcagaag
     4141 gtgaatgtcc ttttgaacgc aacacttgat actgcgcagc aaaaatgcct tgtatcgcac
     4201 ccatcagcgt tcctctttca cccgtgaggt cagaatatac ttccttctta aaatttgtct
     4261 caaacaaata accgcttccg atcgcaatgc ccaatgcagc tactctctca aatgcacggc
     4321 cggtagcgtc ctggtagatg gcgtagctgc tgttcaatcc gcgtccctgt aagaacatcc
     4381 tgcgcaatga agtgccagaa ccttttgggg ctaccagaaa tacatctaca tcaggcggtg
     4441 gaataattcc cgtttgttcc ttatatgtta ttccaaaacc gtgagaaaag tataaagctt
     4501 taccgggagt taaatgtttt tttacagtgg gccacaactg aatttgcgca gcatcgctta
     4561 acaaataaca gatgatcgtt ccgcgttgca atgcgtcctc aatttcaaac aacgattcac
     4621 cgggaacaaa accatcacgc accgctttct cccagctctt tgaattttta cgttgtccaa
     4681 cgatcacatt gacaccattt tctttctggt tcaatgcttg tcccggacct tgaacgccgt
     4741 agcctatcac tgcaaccact tcatccttta aaatttcctg cgccttttca agcgggaatt
     4801 cttcgcgtgt tacaacgttt tcttcaacgc cgccaaaatt tagttttgcc attttattta
     4861 atttgaaaat ttgaaaattt tatgatttga aaattgccat gctcgcagct ccctgctcat
     4921 agctgacagc tcgtagctac atcgtaaata cttcgtcctg ctgattgaga tattcgtttt
     4981 ctattacagt ttctcccggt gctgtatatt cgaattcttt aagcttggaa tggaatccgt
     5041 cgctgttctt aatgatagct acccgcgcac tcctcacaaa ttcgatcagt ccaaacggtt
     5101 ctaagacttt aatgaggtta tctgtttctt cacgatggcc gctcacttca aacacagtat
     5161 aatctttgcg aatcacaact gcactggcgc cgtgctcacg caataatctt tccacctgca
     5221 cttcttccgc gatcacatcg gtaggcactt tgtataatgc gagctcctgc caaacgatct
     5281 cctcgtttgt attgtaatat gccttcaata cctcaacttg cttttcgatc tgtcggcaga
     5341 gtttgcgaac cacatcttcg gtttcgttaa taacaatagt aaatcggtgt acgctttcca
     5401 cttctgttgg ggaagtattc aggctgtcga tatttatttt tcttcttgtg aagattattg
     5461 caatacgatt cagcaaaccg atctgatttt cggtgtaaac tgttatagtg aattcttttt
     5521 tacccgcaac cgaatgggcg ttcgagccag tactcttatt tttttgatcg ctcatttttt
     5581 tatttttttg ttcttcgttt tgggatcaag gcttcttatt tcagccttat ctctgcaacg
     5641 ctacagccct gtggcaccat cgggaaaaca ttattttctt ttccaaccat gatctcaagc
     5701 aggtaagcgc cttcgtgtga gagcatggtt tgtaatgctg attttatttc tgctctttcc
     5761 gaaacgcttt gcccctctat gtgataccct ttggccacct gcacatagtc agggctcgtt
     5821 atatctacaa atgaatatcg cttgtcatga aagagctgtt gccactggcg caccattcca
     5881 agaaagttat tgtttagaat taagatcttg acattgacct cactttgcat gatcgttcca
     5941 agttcctgta tggtcatttg gataccgccg tcgccaataa ttgccaccac tgttctgtgc
     6001 ggtgctccga atttcgcacc gatcgcagca ggtaatgcaa atcccatcgt acccaaacca
     6061 cccgaagtaa cattgctttt tgactcattg aatcttgcat atcgacaggt aaccatttgg
     6121 tgttgaccaa cgtctgttac gataactgca tcacctcctg taatttcgtt gagcgcatcg
     6181 ataacttctg ccatgctgat ctcttcgttt gatggatgca tttctatgtc gatacaaact
     6241 tcttcctcct gctttttata ttctttaaac ttggccagcc attcagggta agatttttga
     6301 tcgatcaatt cagtaagcag cggcaatgtt tctttgcaat cgccccacac cggaaccgtt
     6361 gtttttacgt tcttgtcaat ttctgccgga tcgatatcga gatgaatgat tttcgcctgc
     6421 ttcgcatatt tgtcaagacg accagtgacg cgatcatcga aacgcatccc tatcgcgacc
     6481 aatacatcgc attcgtttgt caaaacattc ggaccataat taccatgcat gccgagcatg
     6541 ccgacattca atggataatc agaaggcaag gcacttaatc caagaatagt ccatgccgca
     6601 gggataccac ttttctcaat aaatttcttg aattcatttt ctgctcttcc gaggatcacg
     6661 ccctggccaa aaataatgaa gggtttttcg gcagcattga tcagttgagc cgcctgttca
     6721 atatattttt ttctgatgat gggctttgga cgataactgc gaatatgatc acatttttta
     6781 tactccgtga aatcaaattt ttggagctgc gcattttttg tgatatcgat caccaccggg
     6841 ccgggcctgc cacttcctgc aatataaaat gctctcgcga gcaccgatgg gatttcggtt
     6901 gcatccgtga cctggtaatt ccattttgtg acgggcgtag ttatattaat gacatcagtc
     6961 tcctggaatg catcggttcc cagcaggtgt gcataaactt gcccggtaat gcaaaccact
     7021 ggtgtagaat cgatcattgc atccgcaaga ccggtaacaa gatttgttgc gccaggtccg
     7081 cttgttgcaa agacaacgcc tgttttgccg gaagtgcgcg caaaaccctg ggcagcatga
     7141 atagcgccct gctcatggcg caccaagata tgtttgagtt gatcgtgata atcatacaat
     7201 gcatcataga tcggcatgat cgcaccaccg ggatatccaa agatcgtttc cacgccttcc
     7261 gcgaccagcg ctttcaaaac tgcttcactt cctgaaatag aaattccttc ggcggcctgc
     7321 ggagcagctt tgaattcccc ttgttttttc gatttctttt tttcgatttc aagtgtctgc
     7381 ataacacgtg tatttactaa tttgtttacc gttgtatttg tggtacgaat gttttaaaaa
     7441 tattccctgt aataacccag tagatccgtt gaggcaacgt cgttaaaacc tacctgtcgt
     7501 aacatcgtaa cgagttgtcc cctgtgatac gttgaatgat tgaatatatg agccagtaat
     7561 tcataataag gcattgaata cgggtcgcca tttaaccgtt taaaatcaag atttgtcggc
     7621 aaccgatttt catcaaacga ctcgagaaaa tctttcaatg ctgctgacgt acttttccat
     7681 aattcaatgt gctcgtcttt cgtgcccgta aatgtcgact gcagccaaac ctggttcggt
     7741 tctttgatca ttctctgtaa ccaaatatgt tcggctgcgg ccacatgcaa cattgtttcg
     7801 cgaatactgt tgaaactgct cgtcacggtt tgcgtccatt ggccatccga aattttttcc
     7861 agccaaccgc atacaatatc atttgcccaa atattatatc ctgataactg tataaaataa
     7921 tttttcgtca tttctctgtt acttcaaatg tgatattctc tttttgacga taatttaccg
     7981 gtttgtcgtt ttgtatagca gggatccagg cgggcgaatg ctgcactacc cggacggctt
     8041 cctctgctgt tccatagccc ggatcgttca acgcctccac ttcggtaacc ttgccatttt
     8101 tgtcaaccag aaaagtaatc gtaactgtat accttcccac aggcgctttc ttttttgcag
     8161 gcgtgtttgc ttttaaatgt gcctgtaaat attcaatcca tccgtcggcg ccaccgggga
     8221 acattgcttc tttttggtaa gtaaaatagc caggtacttt tttaccggta ctgtcatacc
     8281 tttctccaat taagccgccg tttgttgcgt catggtgata actgaagtcc aggcgaccac
     8341 tctcatgata atgatagccg acctgaatgc cccctttatc atcgaagtaa aatgaatctt
     8401 tcaatacgcc cgattcgtag tatcctttag acaggcctat tccctttctg aaattggtat
     8461 cagcataaac agatactgcc gttatcttat ttgactggct ccaatatgag gtaactcgat
     8521 agcccgtgtc ttgtttttca aacgtcgtgt aataaaaata aggagatcct ttgccggtct
     8581 cacgccagga actgtcaaaa tattttgtga tgatatcttg cgtgtggcct attgccgagg
     8641 caaagcatga gacaatgatc attaaagcgg ttcctgattt tttcatctta tttgaatagt
     8701 tgccgttacg cttcatccgt tacacaacct tcactcgcat tttttacact caacatatat
     8761 ttatataaca cacctttttt ttctttcagc tcaggccgtt tccagttctg cctgcgcctc
     8821 gcgatttctg cttctgaaac cctcaggttg atcgtattct tcactgcatc gatctcgata
     8881 atatcatcat catgcaccaa tgcgatcaat ccgccctcga aagcttcagg tgtaatatgg
     8941 ccaacaacaa atccatgcgt accaccgctg aatcttccat ccgtgatcag cgcaacagat
     9001 tttccgagtc cggccccgat aatagcgcct gtgggtttga gcatctcagg catcccaggt
     9061 gctccctttg gaccgatatg tctgatcacg accacatcac ctgcatgcac tcttcctgat
     9121 tgcaaacctt cgatcaaatg cttttcgcct tcaaacactc ttgccgttcc ttcgaaacgt
     9181 tcaccttctt tccctgtgat ctttgcgacg cttccacctt ccgcaagatt gccataaagc
     9241 atttgcaaat gccccgttgc ttttatcgga ttttcaattg ggtgaatgat atcctgtttg
     9301 gcaaaatcaa ggtcgaccgc attcgccaaa ttttctgcga ccgtgtttcc agttacggtc
     9361 aagcattcgc cgtgtaataa ccctttgccg agtaaatatt tcattactgc cggaacgcca
     9421 ccgtatttgt gcaggtcttc catcatatac tttccgctcg gtttaaaatc ggcgagcatc
     9481 ggtgttctgt tgctgatggc ctgaaaatct tccagcgtta atttgacacc cacacttttc
     9541 gccatggcta ttaaatgtag aactgcgttc gtgcttcctc ccattaccat cacaacagtg
     9601 attgcatttt caaatgcttt gcgggtcatg atatcccgcg gctttatatc cttttccata
     9661 agcaacttaa tagctgcacc tatggacgca cattcttttt gtttgtcttc actcaatgcc
     9721 gggtttgatg acgagtttgg caagctcatt cccaaagctt caatcgccga cgccatcgtg
     9781 tttgctgtgt acatgccgcc gcacgcacct gcgcccgggc aggcattacg aacgatattt
     9841 ttaaaggttt cctcatcaag cttgcccata atcttttgtc cgagcgcctc gaacgtcgaa
     9901 acgatattca gctcttcacc gttataatga ccggcggcga tcgttccgcc atacatcatt
     9961 attgccgggc gattcaatcg ccccatcgcc atgatgcagc ctggcatatt tttatcgcag
    10021 cctggaatcg caatgatcgc gtcatagtat tgagcgcccg catttgtttc aatgctgtcg
    10081 gcgatcacat cacggcttac caaactataa cgcattccgt cagtgcccat gctaatacca
    10141 tcgctcacgc cgatcgtata gaaccgcaag ccgatcaatc cttccacgtc gttcacactt
    10201 ttctttaccg tggttgagag atcatttaaa tgcatgttgc atggattccc gtcccagccc
    10261 atgcttacaa ttccaacctg tgcttttttg aaatcttctt ctttgaagcc gatcgcgtat
    10321 agcattgcct gcgcagctgg ttgtgtttcg tcctgcgtta atgtctttga atatttattt
    10381 agttcgaagc ccccgccccc atcccctgaa ggggagtgaa aaactttgtt atttatcatt
    10441 atgctgttca cttcctgatt ttatgatgtc gttattgatc tctttcttct cccgttaggg
    10501 ccggggcttt tatattatgg ttgactttct cagctgtata ttttcaaggt tcactctttc
    10561 atgatctgtt gatctgatgt aatcactgat caggtcgccg accgttgatg tgaaataaaa
    10621 attgaccggc tcgatatcct ttgtaacaaa gccatttgtc aatgtccaat ttac
//
LOCUS       DASQJI010000657         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1314777,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000657 DASQJI010000000
VERSION     DASQJI010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314777"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /gene="ribB"
                     /locus_tag="VEV83_17750"
     CDS             complement(<1..956)
                     /gene="ribB"
                     /locus_tag="VEV83_17750"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HYK47028.1"
                     /translation="MLNSIESAIEDIKEGKLVIVVDDEDRENEGDFITAAAKVTPEVI
                     NFMSKEGRGLICVPLTEERADELNLDLMVSKNTALHETPFTVSVDLIGHGCTTGISAQ
                     DRAKTVQALINPGTKPEDLARPGHIFPLRAKKGGVLRRAGHTEATVDLARLAGFESAG
                     VLVEIMNEDGTMARLPQLRRIADKFQLKIVSIKDLIEYRLKRDSLIEEIVRVELPTKY
                     GYFKLAAFKEKTTGGEHLALMKGEWQKDEPVLTRVHSSCLTGDIMGSFRCDCGEQLHK
                     AMQMVEAEGKGLILYMNQEGRGIGLVNKLRAYKLQEEGMDTV"
     gene            complement(1080..1322)
                     /locus_tag="VEV83_17755"
     CDS             complement(1080..1322)
                     /locus_tag="VEV83_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47029.1"
                     /translation="MNIHPINRQRILIFVFLVIGIVSILPCDCAAVGRYVHGLVPMAG
                     PEFLSPEFGSGVWIAFIAAGAIILFAWIYRSTAKNP"
     gene            complement(1364..>1618)
                     /locus_tag="VEV83_17760"
     CDS             complement(1364..>1618)
                     /locus_tag="VEV83_17760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--alanine ligase"
                     /protein_id="HYK47030.1"
                     /translation="RPQDEIWMSEIFYAGGTTTKDISAADLINDIKPLHANAFFVENR
                     NDFPKRIQAHLSNECIVLLMGARDPTLEEFAAFVWQNLNV"
BASE COUNT          412 a          416 c          336 g          454 t
ORIGIN      
        1 tcaacagtgt ccattccttc ttcctgtaac ttgtaagccc ggagcttatt caccaaacca
       61 attccacgac cctcctggtt catataaagg atcaagcctt ttccttccgc ttcaaccatt
      121 tgcatcgcct tgtgtaattg ctcgccgcaa tcgcaacgaa aacttcccat gatatcgccc
      181 gttaaacaac ttgaatgcac gcgggtaagc acgggttcat ctttttgcca ttctcccttc
      241 atcaacgcaa gatgttctcc gccggttgtt ttttctttga aggcagctag tttgaaatac
      301 ccatacttcg tgggaagttc aacacgcacg atctcttcta tcagtgaatc cctctttagc
      361 ctgtattcga tcaggtcttt tattgaaacg atcttaagct ggaacttatc tgcaattcgt
      421 ctgagttgcg gcaagcgcgc catcgtaccg tcttcattca tgatctccac caatacacct
      481 gccgattcga agccagcaag ccgtgcgaga tcaacggttg cttccgtgtg gcctgctcgt
      541 ctcaatacac cgcccttttt tgcgcgaaga ggaaatatat ggcccggcct ggcaagatct
      601 tcaggttttg tcccgggatt gataagggcc tggacagttt ttgcccggtc ttgtgcgctg
      661 atgccggtcg tgcagccatg gccaatcaga tctacgctca cggtaaaagg cgtctcgtgt
      721 aaggctgtgt tcttgctgac cattaggtca aggttcaatt catcggcgcg ttcttcggtc
      781 aatggcacac agataaggcc acgaccttct ttgctcatga aatttatgac ttccggagta
      841 acttttgctg cggcggttat aaagtcgccc tcgttttcgc ggtcttcatc atccacaaca
      901 attacgagtt tgccttcttt gatgtcttca attgcggatt ctatcgaatt cagcatatca
      961 ccaatttgtg caaaggtacg tgaactttga tgagttaatg gtagcgcacg catagccacc
     1021 tttcaaaata acaaattgaa aaatagcaaa gatgtgcagc tttcaactca aagaccgctc
     1081 tatggatttt ttgccgtact ccgataaatc catgcaaaaa gaataatggc gcccgccgca
     1141 ataaacgcga tccaaacacc gctcccaaat tctggtgaca gaaactccgg ccctgccatt
     1201 gggacgagac catgaacata acgaccgaca gcagcgcaat cgcatggcag gatagagaca
     1261 atgccgatca ctaggaaaac aaatattaaa atacgttgcc tgtttattgg gtggatgttc
     1321 ataattgatt tgtcttgaaa atgctgccgg tatgaaaagc gattcacaca tttaaattct
     1381 gccaaacaaa cgcagcgaat tcttcaagtg ttggatctct tgcgcccatc agcaatacaa
     1441 tacactcgtt tgataaatgt gcttggatcc gctttggaaa atcgttcctg ttttcgacaa
     1501 aaaaagcgtt tgcatgcagc ggcttgatat cattgatcag gtcagcggct gaaatatcct
     1561 ttgtcgtcgt gccccccgca taaaagatct cactcatcca aatttcatcc tgcggcct
//
LOCUS       DASQJI010000658        11972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1009862,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000658 DASQJI010000000
VERSION     DASQJI010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11972
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009862"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1562)
                     /locus_tag="VEV83_17765"
     CDS             complement(15..1562)
                     /locus_tag="VEV83_17765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HYK47031.1"
                     /translation="MNKEMIINATSNGVEIALLENKKLVELHHEKADAVFAVGDLYLG
                     KVKKLIPGLNAAFVDVGYEKDAFLHYTDLSPYARSILKFTQMAMTEKSETVMDFSKFQ
                     LEPEIVKTGKINEVIKGKPEILVQILKEPIAAKGPRLSCEISLPGRFIVITPFNDIVA
                     VSKKIHSSEERKRLQKIVESIKPKNFGVIVRTAAEGKKTAELHEDLSQLINTWTGIQK
                     NLKGAVAPIKILSEQDKTTSILRDLLNEDFNRVVINDKNIFSDTRSYIQKIAPDKAEI
                     VSCHLNGVPIFDQFGITKQVKAAFGKTVNLPSGAYLIIEHTEALHVIDVNSGYKSVSN
                     NQEENALATNLEAGEEIARQLRLRDIGGIIVVDFIDMKLPENKRKLQEAMDGFMRSDR
                     AKHAVLPISKFGLMQITRQRMRPEVNINTSETCPCCNGSGKVTSTLLLIDEIENRLSY
                     LVTHQHKDLTIFVHPIVHSHLTKGIFSLKWKWNRKLKTRVRIKPNSDYYLTEFHFFDA
                     QEEEIKF"
     gene            complement(1847..2683)
                     /locus_tag="VEV83_17770"
     CDS             complement(1847..2683)
                     /locus_tag="VEV83_17770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47032.1"
                     /translation="MNKQQWFLISAGIILLACLFFFGNTIPPHKPLPVAAADSSSTVT
                     TDGLIAKYKVGLNDQQQQKLAQLENSVVRGDVKDQQIHVFHQLASYWADTLHKDYLGA
                     YYDGKAAELENSEKNLTFAAHLLLEGLLGEQDAAMQHWLATEAKEFFEKALTIDPNND
                     SSKIGLGACYMFGNISDNPMQGILTIREIADKDPNNMYAQMMLGLGGIQSGQYEKAIE
                     RFLAVVQKQPGNIEAMLDLAQTYERVGDKVNATKWYNAALKYIPASNARNEIESKIKS
                     LQ"
     gene            complement(2707..2997)
                     /locus_tag="VEV83_17775"
     CDS             complement(2707..2997)
                     /locus_tag="VEV83_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HYK47033.1"
                     /translation="MRKSDLINNISDKTGIPKVDVLVTVETLIKEIKGNISKGENIYI
                     RGFGSFITKKRAAKIGRNIKKNVAVHIPEHYIPAFKPSKEFVNEVKQMQPAE"
     gene            complement(3227..4174)
                     /locus_tag="VEV83_17780"
     CDS             complement(3227..4174)
                     /locus_tag="VEV83_17780"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYK47034.1"
                     /translation="MKFALLTVTYGGLFYKGPALTLEEQIAKAKQLGFDGLAIETKRP
                     VASPLDLRKGDRQRIKKIAADEGVELCAVESMSNFAGRYMEERENNLAMMRFVLELAQ
                     DLNINLVKIFAAWPGLVNDEEEIALYAQYERGHYYKRLYPKDLRKWNHCVEGIREVAD
                     MAADMGITVALQNHAPVLTPGYEDTLAMMREIDRKNVKLCLDVPLFYDRQSDHYVREA
                     VEKCQDYIVHTHYGAWNFAETEDGDVVQQPSPSTGELINYPAFIEALTNVGYKGYLTS
                     EYCLPAIKDHKVAGIEEIDHATKITLEYMKRLVHNAIFI"
     gene            4266..5060
                     /locus_tag="VEV83_17785"
     CDS             4266..5060
                     /locus_tag="VEV83_17785"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HYK47035.1"
                     /translation="MKYIICIVLGACISCTHYPYSSSNKSYKQQAKQYAKTIETYPLH
                     DTLSNTSFIGTTNFNLRKPNFVIIHHTAQNSCAQTLNTFTTAATEVSAHYVICKDGTV
                     HHMLNDYLRGWHAGVARWGNDADINSSSIGIELDNNGFESFPDTQINSLLRLLAALKK
                     QYNIPAANFIGHGDIAPTRKNDPNWRFPWQTLAQNGFGLWYDDTTNIMLPASFAPVQA
                     LRIIGYDVKDTAAAIVAFKRHWLQDTTQVLDSAQYKILYNVMRKYE"
     gene            complement(5096..5527)
                     /locus_tag="VEV83_17790"
     CDS             complement(5096..5527)
                     /locus_tag="VEV83_17790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYK47036.1"
                     /translation="MLGRSLFFAGIFFLSLTSTAQNPPNWASNQLIEPSTLAQMLRQE
                     NSLPLIFNVGLDPVIPHSVNIGTASKKENLDKFRKELSTLPKDTKIVIYCGCCPFEHC
                     PNVRPAIAVLKEMKFTNWQLLDLPNNIRADWINKGYPVVKL"
     gene            complement(5645..6151)
                     /locus_tag="VEV83_17795"
     CDS             complement(5645..6151)
                     /locus_tag="VEV83_17795"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HYK47037.1"
                     /translation="MDTWTLLVGEGEHLTPLQMSIRAFTMFLIMLVLVRLAGMRTFAK
                     KSSFDNIIAIMLGAVLARGVVGASPYWSTVAACVVMVGMHRLIAWITVKSRKLEKLVK
                     GSYIKLYQDGTLIDNNLEKTGMSQSDLHESLRLEAKKMTLSEIDTAFLETNGRISFIL
                     KDKNEKSA"
     gene            complement(6160..6633)
                     /locus_tag="VEV83_17800"
     CDS             complement(6160..6633)
                     /locus_tag="VEV83_17800"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HYK47038.1"
                     /translation="MQTIEVVIETPKGSAQKYDYDPKERFFKLKKVMPAGMVFPFDFG
                     FIPDTKGQDGDPLDIVVISDLKSFPGCCMECRLIGAITAEQTEEGKTVRNDRFLSVPE
                     ASQLFSEVQSIDDLPDQTIEQLEDFFINYNKEEGKKFKPLDRISAKKAFDLIKFK"
     gene            complement(6787..7350)
                     /locus_tag="VEV83_17805"
     CDS             complement(6787..7350)
                     /locus_tag="VEV83_17805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HYK47039.1"
                     /translation="MKSLQDKKVAILTENGFEEVELTSPKAALEEAGATVHVISPQNG
                     KVKAWDHDHWSIEVPVDKTIDEANVDEYDALMLPGGVINPDKLRSNKQAVDFAQQFLE
                     SGKPVAAICHGPQTLIETGLLEGRTMTSYPSLKTDLTNAGADWVDREVVVDNGLVTSR
                     SPKDLEAFNKKMIEEIREGIHVPAPAH"
     gene            7539..10166
                     /locus_tag="VEV83_17810"
     CDS             7539..10166
                     /locus_tag="VEV83_17810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HYK47040.1"
                     /translation="MTTEHQRLIDNAKKPIPLVQWGPYLSERQWATVREDYSPDGDAW
                     HYFPFDHAHCRVYKWGEDGLAGISDLFQNLCFAVALWNGKDPILKERLFGLGNFEGNH
                     GEDVKELYYYLDNLPTHTYMEYLYKYPQLEFPYELLREENRKKTRLDPEYEILDTGIF
                     NDDQYFDVLISYAKLDDEDIFIKIDIHNRYHEGAPITVLPTLWFYNRWSYSENFIKPS
                     ITLLNKHCVQTTHHRLGNHYFYFLNAKDRLFTENETNTQIVTGIPNETVFTKDAFHNA
                     IIKRRNVTALRNKKAGTKFAAVYRLNVEAGETQTVYCRLSNAFIKKPFGFGFENIFEK
                     RKQEANDYYAAILPKGLNEEMANIQRQAIAGLLWSKQYYHFDVERWLTTSDGITAESQ
                     GKATGRNCDWKHLKNQDIISMPDKWEYPWYAAWDLAFQTISMAVADVDFAKHQLLLIM
                     REWYMKPDGQLPAYEWNFSDVNPPVQAWAALHVYYIEQKQTGRGDVIFLKKVFQKLLI
                     NFTWWINRKDRHGNNIFEGGFLGLDNIGVFNRSFHYQGTMQLEQADGTSWMGMYALNM
                     MDIAIEIALHDQSFEDTATKFFEHFVLIAEALNEHHLWNAQDKFFYDVLSVAGADPTP
                     LRIRSIVGLTPLFAVSNILPDELNQLQDFKKRITWFEKYRKKNNRFWPNEERGEGQEI
                     LLSLVRKDRLVHLLEYLLNEDEFLSSGGIRALSKYHEENPYSVTVDGIPYAINYDPGD
                     STSSMFGGNSNWRGPVWMPINFLIIQSIRKYGKFYGDNLLVECPAGSGIKMNLEQVAD
                     ELTQRVISLFERDAEGNRKIYDSYNWFYKKPGNEHLILFYEYFHGDTGRGLGASHQTG
                     WTALVAELISEYGGRIGSS"
     gene            complement(10265..10756)
                     /locus_tag="VEV83_17815"
     CDS             complement(10265..10756)
                     /locus_tag="VEV83_17815"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYK47041.1"
                     /translation="MSTIPKIWESKTVIRFPDCDPFNHLNNARYLDYFINAREDHSVN
                     YLDFNIYHFAAKHGLSWVVSKSQIVYLKPAFLMETVVIDSTMLELKEKEILVEMKMWS
                     DERAKLKSVLWTSFVHVNLKTQKPERHSAELMELFKPLENPLPEKVSFDERIEQLRKG
                     GNG"
     gene            10857..11144
                     /locus_tag="VEV83_17820"
     CDS             10857..11144
                     /locus_tag="VEV83_17820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HYK47042.1"
                     /translation="MSAYVIVDVKISNHEDYEEYKKLTPASITAFDGKFIVRGGKTET
                     LEGDWDPERIVVLEFPTVERAKEWWASEMYSPAKQIRQRSASTKMIVVEGT"
     gene            complement(11231..11479)
                     /gene="atpC"
                     /locus_tag="VEV83_17825"
     CDS             complement(11231..11479)
                     /gene="atpC"
                     /locus_tag="VEV83_17825"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HYK47043.1"
                     /translation="MTLEILTPETRLYSGEVYGIQLPGIAGSFEVLDKHAPLVAALGK
                     GVIKVLKTKTDTANYSIQSGFVEVLNNKTTVLVEGATE"
     gene            complement(11564..>11972)
                     /locus_tag="VEV83_17830"
     CDS             complement(11564..>11972)
                     /locus_tag="VEV83_17830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HYK47044.1"
                     /translation="YPAVDPLDSTSRILTPIIVGDLHYNCANRVKLILQRYKELQDII
                     AILGMDELSEEDKLVVARARKVQRFLSQPFHVAEAFTGLKGVFVSIEDTIRGFNMIMD
                     GEVDDYPEAAFNLVGTIEDAIEKGKKLIEQAKG"
BASE COUNT         3270 a         2658 c         2529 g         3515 t
ORIGIN      
        1 aagttgaatg ttcactaaaa tttaatttct tcttcctgcg cgtcgaagaa gtggaattca
       61 gttagatagt agtcagagtt tggttttatg cggacacgcg ttttcaattt ccggttccat
      121 ttccatttaa gtgagaatat ccctttggta agatgtgagt gtacgatcgg atgcacgaaa
      181 atggtcaggt ctttgtgttg atgagttaca agataactca aacggttttc gatctcgtcg
      241 atcagcagta gtgtagaggt tacttttcca gatccattgc aacagggaca tgtctcagac
      301 gtgttgatgt ttacttccgg tcgcatccgt tggcgcgtga tctgcatcaa cccaaatttg
      361 gaaatgggaa gtactgcgtg ttttgcccgg tcgctgcgca taaatccgtc cattgcctcc
      421 tgaagctttc gcttgttctc cggcagtttc atatctatga agtcaactac aatgatgccg
      481 ccgatgtctc gtaaccgcag ttgtcgcgcg atctcctcgc ctgcttccag gtttgttgcc
      541 aaagcgtttt cttcctggtt gttgcttaca cttttataac cgctgttcac gtcgatcaca
      601 tgcagcgctt ccgtatgctc gatgatcagg tatgcgccac tgggaagatt caccgttttt
      661 ccgaaagctg cttttacctg ctttgtaata ccaaactgat caaagatcgg aacgccgttt
      721 aaatggcagg aaactatttc ggccttatcc ggagcgatct tttgaatata tgaacgcgtg
      781 tcactaaaaa tattcttgtc gtttatcaca acccggttaa aatcttcatt cagcaggtcc
      841 cttaaaatgc tcgtggtctt atcttgctcg ctcagaattt ttatcggtgc cacggcacct
      901 ttgagatttt tctggatacc ggtccacgta ttgatcaact gtgaaaggtc ttcatgaagc
      961 tcagctgttt tctttccttc ggccgctgtt cgcacgatca caccaaaatt tttcggcttt
     1021 atcgattcaa cgatcttttg caatcttttt ctttcttcgg aactgtgaat cttttttgat
     1081 accgcgacga tatcgttgaa aggagttata acaataaacc ttccgggcaa cgagatttca
     1141 caactaagcc tcggcccctt tgccgcgatc ggttccttca ggatttgaac cagtatctcg
     1201 ggcttgccct tgatcacttc gtttattttc ccggtcttta cgatctcggg ctccagctgg
     1261 aatttggaaa agtccatgac ggtctctgat ttttccgtca tagccatttg ggtaaacttg
     1321 agaattgacc gcgcatacgg actcagatcg gtgtagtgga ggaacgcatc tttttcataa
     1381 ccaacatcca caaaagcggc gtttaatccg gggatcaatt tttttacttt accaaggtac
     1441 agatccccaa ccgcgaaaac tgcgtccgct ttttcgtgat ggagttcaac cagttttttg
     1501 ttttccagca aagcgatctc tacgccattc gacgtagcat taattatcat ttctttgttc
     1561 acaaatgcat tctttattag ccataatgaa ttatttaagc gattacgtgc agcaagcatg
     1621 cgcgtaacat ggaacgagga aggaaaggta aagcagtggg aacagtggtg gtaacaaata
     1681 cccggcgcaa caacatatat gtcgcgccgg tatgcaattt atctgttttt cttcttatgg
     1741 cggttttttc tcaacctttt ttttcgctta tgcgtagcta tcttatgacg ttttcttttc
     1801 ttaccacaag gcatacgtaa gtttaatttt taaatagtga ataattttat tgtaacgatt
     1861 ttattttcga ttcgatctca ttccttgcgt ttgaggccgg aatatacttg agcgcggcat
     1921 tgtaccattt cgtagcattt actttatctc caacacgttc atatgtttgc gccaggtcga
     1981 gcatggcctc gatattacca ggttgttttt gaactacggc caaaaaccgc tcgatggcct
     2041 tctcatattg cccgctttga atgcctccta aacccagcat catttgcgcg tacatattgt
     2101 tgggatcctt atctgcaatt tccctgatgg taagtatgcc ctgcatcggg ttatcggaaa
     2161 tattaccaaa catgtagcag gcgcctaacc cgatctttga agaatcattg ttcggatcaa
     2221 ttgttaatgc cttttcaaaa aactcttttg cttcagtggc gagccagtgt tgcattgcag
     2281 catcctgttc tcctaataat ccctctaaaa gcaaatgggc tgcaaatgtg aggttttttt
     2341 cagaattttc caactcggcc gctttaccat cataataagc gcccaaatag tctttatgca
     2401 gcgtatcggc ccagtaagat gcgagctgat gaaaaacatg tatctgttga tcttttacat
     2461 cgccgcgaac gacgctattt tcgagttgag cgagcttttg ttgttgttgg tcgttcaggc
     2521 caaccttgta ttttgcaata agaccatccg ttgttacggt tgaagaagaa tcagcagcag
     2581 cgaccgggag cggtttatga ggagggatcg tgttaccaaa aaaaaagaga caagctaaca
     2641 gtataatacc ggccgaaata agaaaccatt gctgtttgtt caccaaaata atttaaggcc
     2701 gcaaatttac tctgctggct gcatttgctt cacttcattc acaaattctt ttgatggttt
     2761 gaatgcaggt atgtaatgct ccggaatatg tacggccaca tttttcttga tgttcctgcc
     2821 gatctttgca gcccgctttt ttgtgatgaa acttccaaac cccctgatat aaatattctc
     2881 tccttttgaa atgttgcctt taatttcctt gatcaatgtt tcaacagtga ccagcacgtc
     2941 aaccttgggg atgccggttt tatcggaaat gttgttgata aggtcagatt tgcgcatggg
     3001 agacgtttta gatgtgtgaa atagcaaccc taaatgtaat acaatcattt ataaaacaaa
     3061 actaatcagc gaaaaatttc agatattatt tttaaaggag attcgacgga actgtttgat
     3121 gccaaatgcg ttttgtcgcc ctggcggtca atttacgaca cacggttcag gctataaaag
     3181 ttcagtactt agtttgcgcg aggcgcccga ttttaggttg cgcagttcat ataaaaatcg
     3241 cgttgtgcac tagtcgtttc atatactcca aagtgatctt tgtagcatga tcgatctctt
     3301 caatacctgc cactttgtga tcctttatcg ccggcaggca atattcagac gttaaataac
     3361 ctttatagcc cacattagtt aacgcttcga tgaaagcagg gtaattgatg agttctcctg
     3421 ttgacggcga cggttgctgc accacatctc cgtcttcggt ttcggcgaaa ttccatgcgc
     3481 cgtaatgagt gtgcacaata tagtcctggc atttttcaac tgcttcgcga acataatggt
     3541 cgctttgcct gtcgtagaac aaaggcacat ctaagcacaa ctttacattt ttgcgatcga
     3601 tctcccgcat cattgcaagc gtatcttcat agcccggcgt taaaactggc gcatgattct
     3661 gtaaggcaac cgtgattccc atgtctgccg ccatatccgc cacttccctg atgccctcca
     3721 cgcagtgatt ccattttcga agatcctttg gatacaaacg cttataataa tggccgcgtt
     3781 catattgcgc atataaagct atttcctctt cgtcatttac aaggcctggc caagccgcaa
     3841 aaatttttac aaggtttata ttaagatcct gcgcgagctc caaaacgaaa cgcatcatcg
     3901 cgaggttgtt ctctctttct tccatatacc tgccggcgaa atttgacatg ctttcaaccg
     3961 cgcacaactc gacgccctca tcggccgcaa ttttttttat tcgctggcga tcaccctttc
     4021 ttaagtcgag cggtgaagcg accggccgct tggtttcaat cgcgagtcca tcaaacccga
     4081 gctgctttgc tttcgcgatc tgctcttcga gcgtgagcgc aggtcctttg taaaatagtc
     4141 ctccgtaggt gacggtaagc aatgcgaatt tcatgtgacg aagtttaact tacgataaag
     4201 gtaagcaact tcaatgacca tcacgcgctg cagaattctt taccttacgc gtgaattttt
     4261 tagatatgaa atatatcatt tgcattgttc ttggcgcctg cataagttgc acccattatc
     4321 cctattcatc gtcgaataaa tcatataaac agcaggctaa acaatatgca aaaacaattg
     4381 aaacgtatcc gctgcatgat acgctcagca atacgagctt catcggtact actaatttca
     4441 atttgcgcaa acccaacttt gttatcattc atcacactgc acagaatagt tgcgcgcaaa
     4501 cattaaacac ttttacaacg gctgcaacgg aggtcagcgc acattacgtg atctgtaaag
     4561 acggaaccgt acatcacatg ttgaacgact acctgagagg atggcacgcc ggagttgccc
     4621 gttggggaaa cgacgctgat attaacagca gcagcattgg cattgagctc gacaataacg
     4681 gttttgaaag ttttcctgac actcaaataa acagcttgct gcgcttgctc gcggcgctca
     4741 aaaaacaata caatattcct gctgcaaatt tcatcggcca tggagacatc gcgcctacgc
     4801 gaaagaatga tccgaactgg cgtttcccgt ggcaaacgct cgcacaaaat ggttttggat
     4861 tgtggtatga cgatacaaca aacattatgt tgcctgcctc attcgcaccc gtgcaggcat
     4921 tacgtattat tgggtatgat gtgaaagata cagccgctgc gatcgttgcg tttaagcgtc
     4981 actggttgca ggatactacg caggtcctgg attctgctca atacaagata ttgtataatg
     5041 tgatgagaaa gtatgaatag atcattcaca aaatgcacta acgagcacgc attagctaca
     5101 gcttcacaac gggataaccc ttattgatcc aatcggccct gatgttattt ggaagatcga
     5161 gtaattgcca attggtaaac ttcatttctt ttaacacggc tattgcaggc cgtacattag
     5221 ggcaatgttc aaaagggcag cagccgcagt agatcacgat cttcgtatcc ttcggcaaag
     5281 tgcttagttc ctttctgaat ttgtccagat tttctttctt gctggctgtc ccgatattca
     5341 ccgaatgtgg gatcaccggg tctaacccaa cattaaaaat aagcggcaat gaattttctt
     5401 gacgcagcat ctgtgccagc gttgaaggtt caatcaattg gttgcttgcc cagttcggcg
     5461 ggttctgtgc tgtagaggtt aaagacaaaa agaaaatgcc tgcaaaaaaa agtgatcttc
     5521 ctaacatttc gccggtttaa gtttcgcaaa gataaatgga aaaattatgg acgcccggga
     5581 atcacggtca taagtgttgt ccgtttacgt ccgaaattat tttcgtttcg acggccatgc
     5641 aaagtcaggc agatttttca ttcttatctt tcaatataaa actgatccgg ccgtttgtct
     5701 cgaggaaggc cgtgtcgatc tcagacaacg tcatcttttt tgcttccagc cgcaagcttt
     5761 catgcagatc gctttggctc atccctgttt tttcaaggtt gttatcgatc aacgtaccgt
     5821 cctggtataa ttttatataa gatcctttaa ctagtttttc aagtttcctg ctttttaccg
     5881 ttatccaggc aatcaagcgg tgcattccaa ccataaccac gcacgccgct actgtcgacc
     5941 aataggggga agcgccgact accccgcgcg caagcactgc accaagcatg atcgcgatga
     6001 tattgtcgaa cgaagatttt tttgcaaacg tgcgcatacc ggcaagccgg acgagcacca
     6061 gcattatcaa aaacatagtg aatgctctta tgctcatctg gagtggtgta agatgttcac
     6121 cctctccaac caataatgtc catgtatcca tgattcagtt tatttgaatt tgataagatc
     6181 aaaagctttt ttcgcactaa tgcggtcaag gggcttaaat ttttttcctt cctccttgtt
     6241 atagttgatg aaaaaatcct cgagctgttc aattgtttga tcaggcagat catctataga
     6301 ttgtacttca gaaaaaagtt gcgatgcctc cggcaccgag agaaacctat cgttacgaac
     6361 tgtttttcct tcttcggttt gctccgcggt aatagcgcct attaaacgac attccatgca
     6421 acaaccggga aaacttttca ggtctgagat cacaacaata tcaagcgggt cgccgtcttg
     6481 tcctttggta tcaggaataa acccaaagtc aaaaggaaag accatgccgg caggcattac
     6541 ttttttaagt ttgaaaaatc tttctttggg atcataatca tatttctggg cgctgccttt
     6601 tggagtttcg ataacgactt caattgtttg cataggttat aagctttatg gcgaatattt
     6661 caatcgccgg tgttttcaat atcgtacttc ctaaaaattt cgtgcctctt cttacacata
     6721 acgaataaag cccgcttata aacgagcttt attcaccttc aaaatcaaac tcactaaggt
     6781 ttttcattaa tgagctggtg caggtacgtg aataccttca cgaatttctt ctatcatttt
     6841 tttattgaat gcttcaagat ctttcgggct gcggctcgta acaagaccat tatccactac
     6901 aacttcccgg tcaacccagt cagcgccggc attggtaaga tctgttttca gagacgggta
     6961 ggaagtcatg gtacggccct cgagcaaacc tgtttcaatt aaggtttgag gaccatgaca
     7021 tatcgcggct accggtttcc ctgattccaa aaattgttga gcaaaatcaa cagcttgctt
     7081 gtttgatctt agcttatcag gattgatcac tccacccggc agcatcaaag catcgtattc
     7141 atccacatta gcttcatcta tcgttttgtc aaccggcact tcaattgacc agtgatcgtg
     7201 gtcccatgcc tttactttcc cattttgcgg agaaataaca tgcacagtgg caccggcttc
     7261 ttccagtgcc gccttggggc tggtcaactc gacctcttca aagccgttct ctgtaagaat
     7321 tgcaaccttt ttatcttgta acgatttcat tgtggctggc ttttgaatga ataaataatg
     7381 atttgatagt acaaaaacca aaccagcgga cacgatctcg aaagaaaagc cgatcagata
     7441 tccgtgtacg gataagcaac acggttacca tcgaaaatta tcagtattaa tgttgaaata
     7501 agggcacgtc attagtgcca ttatcaattc gaatggatat gaccacagaa catcaacgac
     7561 tcatagacaa cgcgaaaaaa ccgataccac ttgttcaatg gggcccgtac ctaagcgaaa
     7621 ggcaatgggc aaccgtccgc gaagattaca gcccggacgg cgacgcctgg cattattttc
     7681 cttttgatca tgcgcactgt cgcgtttaca agtggggcga agatggactc gccggtattt
     7741 cggacctgtt ccaaaatctc tgttttgccg ttgcactatg gaatggaaaa gaccccatac
     7801 tgaaagagcg gctatttggt ttgggaaact ttgaaggcaa tcatggggaa gacgtaaagg
     7861 aactgtatta ttatctcgac aatcttccga cccacactta catggaatac ctgtataagt
     7921 atccacaatt ggagttcccc tatgaattat tgcgcgaaga aaatcgcaaa aaaaccaggc
     7981 ttgatccgga atatgagata ctcgatacgg ggatctttaa tgatgatcaa tatttcgatg
     8041 ttttaatttc ttatgccaaa ctggatgacg aagatatctt catcaaaatc gatatacata
     8101 accgctatca tgagggtgcg ccgataacag tgttgcctac tctttggttt tacaaccgct
     8161 ggtcttacag cgaaaatttt attaagccat cgatcacact tctaaacaaa cattgtgttc
     8221 aaactactca tcacaggttg ggaaatcact atttctattt tttgaatgcg aaggaccgcc
     8281 tgttcacgga gaatgagacg aacacacaaa ttgtcaccgg cattccaaat gaaactgttt
     8341 ttacaaaaga tgcttttcac aacgcaatca ttaaaaggag aaacgttact gccttaagaa
     8401 ataaaaaagc aggaacgaag ttcgctgccg tttataggtt gaacgtagaa gccggcgaaa
     8461 cgcaaaccgt ttactgcagg ttaagcaatg catttataaa aaaaccattt ggttttggat
     8521 ttgaaaacat atttgaaaaa cgaaagcagg aagcaaatga ttattatgct gcgatccttc
     8581 cgaaaggatt aaatgaagag atggccaata ttcagcggca ggcgatcgcc ggtctgttgt
     8641 ggagtaaaca atattatcat tttgatgtag aacgctggct tacaacaagc gatggcatta
     8701 cagcggaaag ccagggcaaa gcaacaggcc gtaattgtga ctggaaacat ttaaagaacc
     8761 aggatattat cagcatgccg gacaaatggg aatatccatg gtatgcagcg tgggaccttg
     8821 cctttcaaac gatctcaatg gctgttgccg atgttgattt tgccaagcat caattgttgc
     8881 ttatcatgcg tgagtggtat atgaagcccg atgggcagtt gcctgcatac gaatggaact
     8941 tcagcgacgt gaatccaccc gtgcaggctt gggcggcgct gcacgtttat tacatcgaac
     9001 aaaaacaaac tggcagggga gatgtgatat tcctgaaaaa agtttttcag aaactgctta
     9061 tcaattttac gtggtggatc aaccgcaaag acaggcacgg caataatatt ttcgaaggag
     9121 gatttcttgg acttgataac attggcgtat ttaaccggag ttttcattac cagggaacga
     9181 tgcagcttga gcaggcagat ggtacgagct ggatgggcat gtatgctttg aacatgatgg
     9241 acattgcgat agaaatcgcg ctgcacgatc agtcgtttga agatacggca accaaatttt
     9301 tcgagcactt tgttttgata gcagaagcat taaatgagca ccatttatgg aatgctcaag
     9361 acaaattctt ttacgacgtg ctgagtgttg ccggcgcaga tcctacaccg ttacgcattc
     9421 gctccattgt tggactaacg ccactgtttg cggtatcaaa tattttaccc gatgaactca
     9481 atcaactgca ggatttcaaa aagcgaatta catggtttga aaaatatcgg aaaaagaaca
     9541 ataggttctg gcctaacgaa gaacgcggcg aaggacagga gatcctatta tcgctagtgc
     9601 gcaaagaccg gttggtacac ctgcttgaat atttattgaa tgaagatgaa tttctttcgt
     9661 cgggtggcat acgggcattg tcgaagtatc atgaggagaa tccctattcg gtcaccgtgg
     9721 atggtattcc ttacgcgatc aattatgatc cgggcgacag cacttcgagt atgtttggcg
     9781 gaaattccaa ctggcgcggc cctgtttgga tgccgatcaa ctttctcatc atccagtcga
     9841 ttcgcaagta cggaaaattt tatggagata atttgttggt tgaatgtcct gcgggttcag
     9901 gcattaagat gaacctcgaa caggttgcag atgaattaac gcaaagagtg atcagccttt
     9961 ttgagagaga tgcggaagga aatcgcaaga tatatgacag ctataattgg ttttacaaga
    10021 aaccaggtaa tgaacatctc attttgttct acgaatattt tcacggtgac accggccgag
    10081 gtttaggcgc cagtcatcaa acgggttgga ccgcattagt tgcggaattg ataagtgaat
    10141 acggaggaag gatcggaagt agttaattgg tttatttcgt tattgggata ttagtcaatc
    10201 gagatgagcc acgagtaaac ccagtaaccc aataacccaa taaccttata acccaattac
    10261 ccaatcaacc atttcccccc tttcttaact gctcgatacg ttcgtcgaaa ctgacctttt
    10321 ccggtagcgg gttttcaagg ggtttgaaca gttccatcag ttctgctgag tgtcgttcag
    10381 gcttttgtgt tttaagattg acgtgcacaa aactggtcca caacacgctc tttaatttgg
    10441 ctctttcgtc actccacatt ttcatttcta ccagtatttc tttttccttt aactccagca
    10501 tcgtcgaatc tatcacaact gtttccatca ggaatgccgg tttcaaataa acgatctggc
    10561 ttttactaac aacccaactt aacccgtgct ttgcggcgaa gtgatagatg ttgaaatcta
    10621 aataattcac cgaatgatct tcacgtgcat tgataaaata atcaagatag cgggcattgt
    10681 tcagatgatt gaacggatca caatcaggaa agcgaatcac cgttttgctt tcccatattt
    10741 ttgggattgt actcatgtct gcaaattacc gaatgcaaca gctagcatgc cgccgaaaaa
    10801 gtaattttat ttgtgataac ggaaacagtg aaattagcat ggtaaatatt tttacgatgt
    10861 ctgcatacgt tatcgttgat gtgaagatca gcaaccatga agattacgaa gaatacaaaa
    10921 agcttacacc tgcgtccatc acagcctttg acggaaaatt tatcgtgcgg ggagggaaaa
    10981 cggaaacgct cgagggcgac tgggatccgg agcggatcgt agtgctcgaa tttcctactg
    11041 ttgaacgcgc aaaggagtgg tgggcatcag aaatgtattc gcctgctaag caaattcgcc
    11101 aaaggtcagc atccacaaag atgatcgtgg tggaaggaac ttgaaaattt atcgctcgct
    11161 cacttgggtg ccctcaaaac aaaagccccc gttgccggga gcttttcctt cccatgtgcc
    11221 aaaaaaaaat ttattctgta gcgccttcta ccaaaactgt cgtcttatta tttaatactt
    11281 caacaaatcc actttggatg gaatagtttg ccgtgtcagt ttttgttttc agtactttga
    11341 taactccctt acccaatgca gcaacaagcg gagcgtgttt gtcgagcacc tcaaaagaac
    11401 cagcgatccc gggtaattgg atgccgtaaa cttcgccgct atataatctt gtttccggtg
    11461 ttagtatttc gagcgtcata atttgaaaat ttgaaatttg aaaatttgaa aatggatgtc
    11521 gcgtgattaa ttattcaatt agcacatttt caaaatcttc aaattatccc tttgcctgct
    11581 ctataagttt cttacctttt tcaatcgcgt cttcaatcgt gcccacgagg ttgaatgcgg
    11641 cttcaggata gtcgtcaact tcaccatcca tgatcatgtt gaatccgcgg atcgtgtctt
    11701 caatgctcac aaacacaccc ttcaaacctg tgaaggcctc ggcgacatgg aacggttggg
    11761 aaagaaagcg ttgcactttt ctcgcacggg caacaactag cttatcctcc tcactcaatt
    11821 cgtccatacc gaggatcgca ataatatcct gcagttcttt ataccgctgt aagatgagtt
    11881 taaccctatt cgcacaatta taatgaagat cacctacaat aattggcgta agaattcttg
    11941 aagtggaatc aagtggatca accgcgggat aa
//
LOCUS       DASQJI010000659        12726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1931695,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000659 DASQJI010000000
VERSION     DASQJI010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12726
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931695"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..694
                     /locus_tag="VEV83_17835"
     CDS             23..694
                     /locus_tag="VEV83_17835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HYK47045.1"
                     /translation="MKKINLRLPEIVRYAPRAGGSGIRAVFIDKDGTLIKDVPYNVDP
                     SLIVFEDGAADALRILKKNNFLLIVVSNQPGIAKGFFSIRDLEIVYTAIQQKLSQSNV
                     QLDAFYYCPHFEEGAVQQFVIDCDCRKPKPGLLLTAAKDFDIDLRQSWMIGDILDDIE
                     AGNTAGCKTILLDNGNETEWQMDEKRTPAFKVMSLTEAAQIIQEASNSIPPKRNYERK
                     RLKRE"
     gene            697..1821
                     /locus_tag="VEV83_17840"
     CDS             697..1821
                     /locus_tag="VEV83_17840"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYK47046.1"
                     /translation="MEWSNYRNILCVRADNMGDILMTTPALRALKETFGCSITLLTST
                     MGSLITPYIQFIDQTIEFDLSWVKSHTAYPPAEYFQLIEKLKRYQFDAAIIFTVYSQN
                     PLPTALLLYMADIPVRLAYCRENPYQLLTHWIPDKEPYSFIQHQVKRDLALVAATGAK
                     TTDESLSLSFSKKRFYTTQEKLAACGVDINQEYILIHPGVSETKREYPRDLWIKTVQL
                     IHQHTKKQILLTGAENEKQLTDYIQIRSGEGSFSTAGLLDIEEFIALISHAPLLISVN
                     TSAVHIAAALKTPVIVLYALTNPQHEPWMTRSVVLPFEVPKKLQSRNQVIQYVNETHF
                     NDHIAFPTPEKILANAMILLGEKRKSAATVQRTGLKLLNE"
     gene            complement(1811..4417)
                     /locus_tag="VEV83_17845"
     CDS             complement(1811..4417)
                     /locus_tag="VEV83_17845"
                     /inference="COORDINATES: protein motif:HMM:NF024974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK47047.1"
                     /translation="MKAHKFSAFGRLSLVLISLLSALTTYADHLKGGWIKYEYIGLSG
                     SNVNYRVSFYQYSDCSEPEKVDPSIYLAVFGAGYSKVFNIGQTSLKTELKSNFGPCFQ
                     NPPTICYLVAEYTTTISLPKNASGYTLAVQRCCRIAGIANVPNSNAIGLTYTVTIPGG
                     LNSDNSSPIFDFRDTVAICFNAPFTLDLGAKDIDGDSLTYALCDGLTGGSQIEPVVMD
                     PAPPPYSIIPYIPPYSGSLPLGANVSVDSRTGLLSGTAPGQTGTYVVAVCVNEFRNGA
                     FIANTRKEIHLDVENCQLGGAALKPVYITCNGFDFSFSNENPDKPDYKYRWDFGVNGI
                     NTDTSNQAHPTYTYKDTGDYTIKLTVSNSVGCTDSATAHLKIYPGFVTDFSINGSCIF
                     NPYNFTDLTKTDYGYVDSWRWNFGESVSSTDSTQNPLYTYPTTGTKTITLITTNSKGC
                     IDTATKILTVTTGPDISMKFVDTLICSIDTLRLESFSNTAGAVFSWAPQYNLIGSSSD
                     RPFVFPKQTTTYDLTVSYNGCVAHDSVLVNVIDQVSLNLPNDTTICGTDSIPIIPNTN
                     ALYFTWSPSAGLSDPKAKVPLASPAANTTYSVVASVGKCTAKDAMNVRVVPYPQVQAG
                     FDALVCYGKTVQLSANIKGADFKWFPTNSLLNSNTLDPVAGPQSTTSYILSVTDTLGC
                     PKPVTDTVVVTVIPKVQAFAGNDTAIVINQPLQLNATGGSEYLWSPTTYLSNPLIFNP
                     VAMLPAGKDSMSYRVKVSTPEGCTGYDSLNIYVFETLPEIFVPNAFTPNHDGINDVFR
                     PKLAGMKRFYYFRVYNRWGELLYSTADIGKGWDGTFNGRDQASGTYVWAAQATDYKDH
                     TVTKKGTFVLIR"
     gene            complement(4404..5210)
                     /locus_tag="VEV83_17850"
     CDS             complement(4404..5210)
                     /locus_tag="VEV83_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK47048.1"
                     /translation="MTKKIIFRGSEIFYDVYGDGVPVALIHGFAETARVWHKQIDELK
                     KICRLITPDLPGSGRSGTLPIEIDKFSIGDLAESVIAVLENENIEKCIMLGHSMGGYV
                     TLDFTEKHPDRLIAFGFLQSTAFADSEEKKQNRLRGIELIQAYGSYSFLKNTTPNLFA
                     DKFRTEHPEEVNGLIEDGKRFDKQSLQQYYYAMMHRPDRTDVLKNSKVPVLFIVGSDD
                     IAAPLHDLLKQVHLPGISYIHMLEQAGHMGMWEAAAVFNDHLEEFINESA"
     gene            complement(5215..6375)
                     /locus_tag="VEV83_17855"
     CDS             complement(5215..6375)
                     /locus_tag="VEV83_17855"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HYK47049.1"
                     /translation="MKNSFFSFLLLTCVFSSGFAQTHSSHVRMSVITCSPGDELYSLF
                     GHTALRVIDSASHSDIVYNWGTFSFNEPNFYLKFLRGNLLYYVSAYSFTDFLEEYTVE
                     HRSVYEQELNADSTVKRKIMDAVDHNMEGPNRFYKYDFLLDNCTTRVKNIVFENAAGA
                     TIDQKIVPAQTTARDLIHYYLERGGKPWTELGIDILLGTPVDRPVSNDEAMFMPEFFM
                     KGLANAKKSNEPVVSDATLVLQGEPQQHPSWKWLPLMVLTIASLCIFLISVMKQNGAA
                     ATLRIFDALLLYITGLIGILITFMWFATDHTVCQDNFNLAWALPTNLVAAFFLTKRPP
                     WLKTYFLVAAIIAALVLATWFWMPQQLNIALLPVVLLLLNRYVKLAQPGPKR"
     gene            complement(6394..7398)
                     /locus_tag="VEV83_17860"
     CDS             complement(6394..7398)
                     /locus_tag="VEV83_17860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HYK47050.1"
                     /translation="MQKWITALSVVLFVVKIIAYYLTNSLTILSDALESIVNVLAGFI
                     GLYSLYVAAKPKDLEHPYGHGKAEFISAAVEGGLITAAGLLILYEAVINFIKNKPLEE
                     LDTGLWLIAATAVLNWVAGFICEQIGKRNNSLALQASGRHLQIDTYSTLAIIVTIALI
                     LITHFAMLDKIVACGLGLFIMYNGYKIIRRSLAGIMDEADMELLKRMVILLNKDRRPN
                     WIDIHNLRIIKYGAVLHIDCHLTVPFYLNVLEAHDEVDALQQLIQSEFGDAVEFFVHT
                     DGTYPVSCRLSGNRSNQADFLETKEWTLQNILSNERFGVAEIEEPVIVQAPQGVSTGE
                     "
     gene            complement(7480..8223)
                     /locus_tag="VEV83_17865"
     CDS             complement(7480..8223)
                     /locus_tag="VEV83_17865"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HYK47051.1"
                     /translation="MNSETKTSRRNFIKTGGKATIAATLTASALSSFARGSRPLENTP
                     YTQTPLGYDYKALEPSIDAMTMEIHYTKHAAAYAKNLADACAAENVNTQTTSLENLLS
                     DISKYSAKMRNNAGGHYNHELFWKIMSPQSQPSAPSGKLVDLIQRDFNSVDAFKNQFN
                     DAAKNRFGSGWAWLVYTGDKKLVIGSTPNQDNPLMSVSDVKGFPVMGLDVWEHAYYLK
                     YQNKRADYITAWWNVANWNFVQQRFDANA"
     gene            complement(8294..9739)
                     /locus_tag="VEV83_17870"
     CDS             complement(8294..9739)
                     /locus_tag="VEV83_17870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HYK47052.1"
                     /translation="MIKKLDKLIIKAFIAPFIATFLISLFVLVMQFFWLYIDDLVGKG
                     LDVFTILKLIGYVGATAVPLALPLALLLSSIMTFGNLGESFELVAIKSAGIPLLRFMM
                     PLLIVAVLISGVAFLFANNIIPVANLKLNALKYDIIVTKPALDIKEGVFYDKIEGFVI
                     KIGKKEKDDSTIRNVVIYEKTYGLQDNFLTARSGTMKVTPDKHFLEFTLRDGWNYQEN
                     GNRYASSSDFIRLGFKEYKKDFDLSSFQMTRTEDSLFKWDPKMLTVHQLNMSIDSVQS
                     LGNNITKRLVSQEKPYLTFYQYEDSAWRKSDSLRKKKVANISDFIPDSLRATIFERAL
                     ARVNAVQGFSEVAATDYGANQMLLRKNRIEWNRKFTLSIACIVLFMIGAPLGSIIRRG
                     GLGSPLVFAIVFFVIFHLLNTFGEKFANQGITKAFTGMWLSTFVLIPIGIFLTSKAMR
                     DSQLFNKEFYFRFFRRMEKVVSLWTRRVRQA"
     gene            9763..10362
                     /locus_tag="VEV83_17875"
     CDS             9763..10362
                     /locus_tag="VEV83_17875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47053.1"
                     /translation="MVATNVELSKTELELVTSSDVILTKNRIIEKVYALFGSLSEGYR
                     NILAKYSHDLPVEIFEKAPKIYRGENYMALPYVMLDYPRIFGKEEVFAIRSFFWWGNH
                     FSITLQLSGNYMTMYAQNIVTQLHDRKEETWFIGTNESAWEHHFKEDNYLPLREISLP
                     AFTQRSFVKIAKKIPLIEWTSAEDFFLKNFNELLGLVRS"
     gene            complement(10359..10739)
                     /locus_tag="VEV83_17880"
     CDS             complement(10359..10739)
                     /locus_tag="VEV83_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="START-like domain-containing protein"
                     /protein_id="HYK47054.1"
                     /translation="MAKKQMFTLEYPVRCSPTILYGFLSTPAGLQEWFADKVDERDNV
                     FMFSWNGSVEKAEVVDSEIDKFIRFRWLTSAKDEYFEFRIEKTEITNQTILVIRDFAE
                     KAEIKDQSQLWETQVKDLFHRLGN"
     gene            11209..>12726
                     /locus_tag="VEV83_17885"
     CDS             11209..>12726
                     /locus_tag="VEV83_17885"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HYK47055.1"
                     /translation="MRKFLRLTILFFISVYVLTSHAQPVMFRQTAEHTSYISSKQDYV
                     FGEQAWKFETGAAIRSTAVCSNNIVYFGNSKGILFALDRSSGAIKWQYNAGYAIASSP
                     ALLNGSVLFTDNKQSLHSLNASTGKQNWQLDFGPNLPNEWGFDYYYSSPTIADGKIFI
                     GAKDGFVYNVSADGKVAWKFKADNIVRSTPAVSDKAVFFGDIDGILYRVDVTTGKELW
                     RFKTIGNGLKNEDFGFDRRAIISSPTIAKDKVIVGCRDGFFYAVDKNTGKELWHVDHN
                     VSWVISSIAVKDTIAVTGTSDGRFVQAVNVNTGKEIWKFRTVSIVWSSPVIYNDKVYI
                     GSQEGVLYCLDLLTGKRITAFQAKGKIFTSPVIYDSLLFFGTDEGNFYALRPSPYTYP
                     RPADIKRYVFWQQDVDTYFHYGNDKKINIYLNVNGYETVDSKQLAQVLQKTDSAKNSV
                     IVFAANFFPKEILSGGAQSLLRQYLNNGGRIVVLGNNPIIYKIDSTGNMAGFDFTT"
BASE COUNT         3560 a         2843 c         2858 g         3465 t
ORIGIN      
        1 attgaaacct cagtaacaaa gtatgaagaa aataaatctg cggcttccgg agatagtgcg
       61 ttacgctccc cgcgccggcg gctcggggat aagggctgtg tttatcgaca aggacggtac
      121 acttataaaa gacgttccat ataacgttga cccttcgctc atagtatttg aagatggagc
      181 cgcggatgcc ttgagaattt taaaaaaaaa taatttttta ctcattgttg tatccaatca
      241 accgggcata gcaaaaggtt ttttttctat tcgggacctg gaaattgtct atacggctat
      301 ccagcaaaaa ctttcccaaa gcaacgtgca acttgatgcg ttttattatt gcccgcattt
      361 cgaagagggc gctgttcagc aatttgttat tgattgtgat tgccgaaagc caaaacctgg
      421 tttattatta acagcagcaa aagatttcga catcgacctg cggcagtcgt ggatgatcgg
      481 ggatattctt gacgacatcg aagcaggtaa taccgccggc tgcaaaacca ttttactcga
      541 caatggcaac gaaacagaat ggcaaatgga tgagaaaagg acaccagctt tcaaggtaat
      601 gtctttaaca gaagctgcgc aaattatcca ggaagccagt aattcaattc cgccaaaaag
      661 aaattatgag cgaaaaagac tgaaacgaga ataaagatgg aatggagcaa ctatagaaat
      721 attttgtgcg tgcgtgctga caacatgggc gatattctca tgacaacgcc ggctctgcgc
      781 gcattaaaag aaacattcgg ttgcagcatt acattactta cctcgacgat gggcagtttg
      841 atcacgccat acattcagtt catcgatcaa acgatagagt ttgatctgtc atgggttaaa
      901 agccacactg cttacccgcc ggcagaatat tttcaactga ttgaaaaatt aaagagatat
      961 caatttgacg cggccatcat atttactgtg tacagccaaa acccgttgcc caccgcgctc
     1021 ctgctataca tggcagatat cccggtaaga ttggcgtatt gtcgcgagaa tccataccaa
     1081 cttttaaccc actggatccc tgacaaagaa ccgtactcgt tcatccaaca ccaggtaaaa
     1141 agagatttag cgctggttgc tgcaacaggc gcaaaaacaa ctgacgaaag tttgtctctt
     1201 tcattttcta aaaaacgatt ctacacaact caggaaaaac ttgccgcctg tggtgttgac
     1261 atcaatcaag aatacatcct gattcatccg ggtgtatctg aaacaaagcg cgagtatccg
     1321 cgagaccttt ggatcaaaac ggtacagcta atacatcagc ataccaaaaa acaaatattg
     1381 ctgactggtg cggaaaacga aaaacaactt accgactata tccaaataag atctggtgaa
     1441 ggaagttttt cgaccgccgg tttgttagat atcgaagagt ttatcgctct catcagccat
     1501 gcgccgcttt tgatctcagt gaatacttct gcagtgcata ttgcagcggc attaaagacg
     1561 ccggtgatcg ttttatatgc gctcacaaat ccgcaacacg aaccatggat gacgcgctcg
     1621 gtggtgctgc catttgaagt accgaaaaaa ttacagagcc ggaaccaggt gatacaatat
     1681 gtgaacgaaa cgcatttcaa cgatcatatt gcatttccaa cgcccgaaaa gatcctggcg
     1741 aacgcaatga tattattggg cgaaaagaga aagtctgctg ccacggtgca gcgaacaggt
     1801 ttaaagctgc tcaacgaata agaacaaagg ttcccttttt cgtgacggta tggtctttat
     1861 agtcggtggc ctgtgctgcc cacacataag ttccgctggc ctggtctctc ccgttgaagg
     1921 tcccgtccca gcctttaccg atatcggccg tactgtacag cagctcgccc caacggttgt
     1981 acacacggaa gtaataaaat cgtttcatgc ctgccagctt tggacggaac acatcattga
     2041 tgccgtcatg gttaggagta aaagcgttgg gcacaaatat ttcgggcaac gtttcaaata
     2101 cataaatatt aaggctgtcg taacctgtac atccttccgg cgtactcact ttcacacggt
     2161 agctcatgct atcttttcct gcgggcagca tagctacagg attaaagatt aacgggttgc
     2221 tgagatatgt tgtcggtgac caaagatatt ctgatccgcc ggtggcatta agttgcaatg
     2281 gctggtttat gacgatcgct gtgtcgtttc ccgcaaatgc ctgcactttt ggaataacgg
     2341 ttacaaccac cgtatcggtg acgggctttg gacaacccag ggtatcggtg acggacaaaa
     2401 tgtatgatgt ggttgattgc ggcccggcaa ccggatcaag ggtgtttgaa tttagcaggc
     2461 tgtttgtcgg gaaccacttg aaatctgctc ccttgatatt agcgcttaac tggaccgtct
     2521 tgccataaca cacaagcgca tcaaatcccg cctgcacctg cggatatgga actacacgaa
     2581 cgttcatcgc gtcttttgcc gtgcacttac ccacagaagc gacaactgaa tacgtggtgt
     2641 tagccgcggg actggcaagc gggacttttg ccttagggtc gcttaatcca gcggaagggg
     2701 accaggtaaa atacaatgcg tttgtgttgg gtatgattgg gatgctatct gttccgcaaa
     2761 ttgttgtgtc gttcggaagg ttcagcgaaa cctggtcgat cacatttacc aacacagaat
     2821 cgtgcgcgac gcagccattg tagctcaccg ttaaatcgta agtggtggtt tgttttggaa
     2881 atacaaaagg cctgtccgag ctggagccga tcaaattgta ctggggcgcc caactgaaca
     2941 ctgctcctgc agtatttgaa aaagattcca ggcgcagcgt gtcaatactg caaataagtg
     3001 tatcgacaaa tttcatcgaa atgtcagggc ccgtggtcac cgtcaggatt ttggttgcag
     3061 tatcaatgca ccctttcgag ttcgtggtta taagcgttat tgtctttgtc ccggtagtag
     3121 gataagtgta cagcggattt tgagtactgt cagtactgga aaccgattcg ccaaagttcc
     3181 accgccatga atcaacatat ccatagtccg tttttgtaag atcggtaaag ttgtacggat
     3241 taaaaatgca actgccgttg atggaaaaat cggttacaaa gccggggtag atcttcaggt
     3301 gagcggtcgc cgaatcggtg cagcccacgg aatttgaaac agtcagtttg atagtgtagt
     3361 cgcccgtgtc tttgtacgta tacgttggat gtgcctgatt cgatgtgtca gtattgatac
     3421 cattaacacc aaaatcccac cggtatttgt aatcaggttt gtcaggattt tcgtttgaaa
     3481 aactaaagtc gaatccattg catgtgatgt aaaccggttt tagtgcagcg ccacccaatt
     3541 gacaattctc cacgtcaaga tggatttctt tcctggtatt tgcaatgaaa gccccatttc
     3601 tgaattcatt cacgcacaca gcaaccacgt aagtgccggt ttgccctgga gcagtgcctg
     3661 acaacaggcc ggttctcgaa tcgacggaca cgttcgcacc caacggcagt gatcctgaat
     3721 acggaggtat ataaggaatg atcgaatacg gcggcggtgc gggatccatc acaaccggct
     3781 caatttgcga accgcctgtg aggccatcgc acaacgcata ggtaagggag tccccgtcga
     3841 tatctttggc accaaggtca agggtaaatg gcgcattaaa acatatagca acggtatcac
     3901 gaaagtcgaa aatcgggcta ctattgtcgc tgttcaagcc acccgggatc gtcaccgtat
     3961 acgtaaggcc aatcgcattg gagttaggta cgttggcaat accggcaata cggcaacagc
     4021 gttgcactgc caacgtataa ccgcttgcat ttttaggtaa agagatggta gtggtgtact
     4081 cggccacgag gtagcaaatg gtgggcggat tttgaaagca gggaccgaag ttgcttttta
     4141 gttccgtctt caaactggtt tgaccaatat tgaaaacttt tgaatagcca gcgccaaaaa
     4201 ccgcaaggta aattgacgga tctacttttt ccggttcact gcaatcggaa tactggtaaa
     4261 aagaaacgcg atagtttaca ttgctgcctg agagaccgat atattcatat ttgatccagc
     4321 cgcccttcaa gtggtctgca tacgtagtta atgcggataa aagggagata agtaccaacg
     4381 acaatctacc gaaagcagaa aatttatgcg ctttcattta tgaattcctc caggtgatca
     4441 ttaaaaactg ctgcagcttc ccacattccc atatggccgg cctgttcaag catgtgaata
     4501 tacgaaattc cgggaaggtg tacctgcttc aataagtcat gtaatggggc agcaatgtca
     4561 tcacttccaa caatgaatag taccggcact ttgctgttct tcaaaacgtc cgtgcggtcg
     4621 gggcggtgca tcatcgcata gtaatactgc tgcagactct gcttgtcaaa tcgcttcccg
     4681 tcttcgataa gaccatttac ttcttccgga tgctccgtcc tgaatttgtc agcgaatagg
     4741 ttcggcgtag tgttttttaa gaatgaataa ctgccatacg cctggatcaa ttcaatcccg
     4801 cgcagccggt tttgtttctt ctcttcgctg tcagcaaatg cggtcgattg aagaaacccg
     4861 aatgcaatca acctatccgg gtgcttttct gtgaagtcaa gcgtcacata accccccatg
     4921 ctatggccaa gcataatgca cttttcaatg ttttcgtttt ccagaacggc gattacagat
     4981 tcagccaggt cgccgattga aaacttatcg atctcaattg gaagcgttcc cgatcttccg
     5041 gaaccgggca gatcgggagt tattaatctg caaatctttt tcagctcatc aatctgcttg
     5101 tgccataccc tggccgtctc agcgaaacca tgtatcaaag ctaccggcac gccgtcgccg
     5161 tacacatcgt aaaaaatttc tgagcctcga aatattattt tcttcgtcat caaattatct
     5221 tttcggcccg ggctgagcaa gctttacgta ccggttcaac agtaaaagca cgaccggcaa
     5281 caaagcaata tttaactgct gaggcatcca aaaccaggtt gccagcacca atgcagcaat
     5341 gatagcagcc accaaaaaat acgtttttaa ccacggcggt cgttttgtca aaaagaatgc
     5401 ggccacgagg ttcgtaggca acgcccacgc aaggttaaag ttgtcctggc aaactgtatg
     5461 atccgtagca aaccacataa aagttatcag aattccgata aggcccgtga tatataacaa
     5521 taacgcgtcg aagatgcgaa gggttgctgc cgcgccgttt tgtttcatca ccgatattaa
     5581 aaaaatgcac aatgaggcga tcgtcaaaac catcagcggt aaccatttcc atgacggatg
     5641 ctgctggggt tctccctgta aaaccagcgt agcatcgcta acaaccggct cgtttgattt
     5701 tttcgcattg gcgagccctt tcataaaaaa ttccggcatg aacatggcct cgtcgtttga
     5761 cactggcctg tcaacaggtg tgcccagcaa gatatcaata cctaattcgg tccagggctt
     5821 acctccccgc tcgaggtaat aatgtatgag gtcgcgcgca gtagtttgtg cgggcacaat
     5881 tttttgatcg atcgttgcac cggcagcgtt ttcaaataca atattcttta cacgggtagt
     5941 gcagttgtca agcaaaaaat catacttata aaatcgattt gggccttcca tgttatgatc
     6001 gacagcatcc attatttttc gctttaccgt gctgtctgcg tttaattcct gttcatacac
     6061 actacgatgt tcgacagtat actcttcgag aaagtctgta aaactataag cagagacgta
     6121 gtaaagaaga ttgcctctta agaattttaa ataaaagttt ggttcattga agctgaacgt
     6181 tccccagtta taaactatgt ctgaatgcga agcactgtca atgacgcgta acgctgtatg
     6241 accaaataaa gaatacagct catcaccggg actgcacgtg atcacgctca ttcgaacgtg
     6301 tgagctatgc gtttgtgcaa aaccgctgga aaacacgcat gtcagcaata agaaactgaa
     6361 gaaagaattt ttcatctgtg cgaatgtaaa gttttattct cctgtgctga ccccttgcgg
     6421 tgcctgcaca atcaccggct cttcaatttc ggcgacgcca aatctttcgt tactcaaaat
     6481 gttttggagc gtccattctt ttgtctccag gaaatcggcc tgattggatc tgttgcccga
     6541 aaggcggcag cttacaggat aagttccatc ggtgtggaca aagaactcca ctgcgtcgcc
     6601 aaattcagac tgtatcaatt gctgcaaagc gtcaacttca tcgtgtgctt caagcacatt
     6661 caggtaaaat ggcacggtga gatggcaatc gatatgtagc actgctccat atttgatgat
     6721 ccgcaggtta tgtatatcga tccagttggg acgccggtct ttgtttaata aaatcaccat
     6781 tcgcttcagc aattccatgt ccgcttcatc catgatgccg gccagtgacc ttcggattat
     6841 tttgtagccg ttgtacatga taaataaacc gaggccacac gcaacaattt tgtcgagcat
     6901 tgcaaaatgc gtgatcagga tgagcgcgat cgtaacgatg atcgcgagcg ttgagtacgt
     6961 gtcgatctgc aaatgcctgc cgctggcctg gagcgcaagc gaattgtttc ttttgccgat
     7021 ctgttcacaa atgaaacctg cgacccaatt taaaacggca gttgccgcga tcagccacag
     7081 gccagtatcc aactcttcga gtggcttgtt ctttataaaa tttatgactg cttcatatag
     7141 aataagcagg cccgccgcag tgatcaaacc accttcaact gcagcggaaa taaattctgc
     7201 tttgccatgg ccataaggat gttcgaggtc ttttggcttc gcggcgacgt ataaactgta
     7261 taaaccgatg aagccggcca gcacattcac aatgctttcg agcgcgtcgg aaagaatagt
     7321 aagcgaattc gtgagataat aagcgatgat ctttactaca aaaagtacaa cagacagcgc
     7381 tgttatccat ttttgcacat tcaagttttg ccgggccgtt tgcaattgcg ttcttgttta
     7441 tatgaccgga ctgatgagga gggtgaattt taaaacaggc taagcatttg cgtcaaatcg
     7501 ctgctgaacg aaattccagt tcgccacatt ccaccacgca gttatgtagt cagctcgctt
     7561 gttttggtat ttcaaatagt atgcatgttc ccatacatcg aggcccatta caggaaaccc
     7621 tttcacatcg ctgacgctca ttaaagggtt atcctggttt ggcgttgagc ctattaccag
     7681 tttcttatcg ccggtataaa caagccaggc ccatccgctg ccaaaacgat ttttcgctgc
     7741 atcgttgaat tgatttttga aagcatcgac cgaattaaaa tctctttgta tcaggtcaac
     7801 caactttcct gatggcgctg aaggctgcga ctgcggcgac atgatcttcc aaaataactc
     7861 atggttataa tgtccgccgg cgttgttgcg cattttcgct gaatatttcg aaatatctga
     7921 aagtagattt tcgagagagg tagtttgtgt gttcacattc tcggcggcac acgcatccgc
     7981 aagatttttc gcataagcgg cagcatgttt tgtatagtgg atctccatcg tcattgcgtc
     8041 gatcgatggt tccagcgctt tgtagtcata gcccaacggt gtttgtgtgt acggtgtgtt
     8101 ctcaagcggc cgcgatccgc gtgcaaatga tgataaagcc gatgcggtta atgttgcggc
     8161 aatggtggcc tttccgccgg tcttaataaa atttctccgg ctggtttttg tttctgagtt
     8221 catgatatgc ttttaataat tgaaaaatat cgcagcttat tcgcgaagcc tggcttggaa
     8281 aaaatcaacc gtctcaggcc tggcgaacgc gccttgtcca taaagacaca accttttcca
     8341 tgcgacggaa aaagcggaaa taaaactcct tattgaacaa ttgcgaatcg cgcattgcct
     8401 tcgaagttag aaatattccg atcggaatga gaacgaatgt tgaaagccac atgcctgtaa
     8461 aagccttcgt gatgccctgg ttcgcaaact tctccccgaa tgtatttagc aggtgaaaga
     8521 tgacaaagaa aacaattgcg aacacaagcg gagagcccag cccacccctg cggatgattg
     8581 aacccaatgg agcaccgatc ataaacaata caatacatgc gatagacaac gtgaacttcc
     8641 gattccactc gatgcgattt ttgcgcagaa gcatttgatt ggccccatag tccgtcgcgg
     8701 caacttctga aaacccttgt acagcgttta cccgtgcaag ggcccgctca aatatcgtcg
     8761 cgcgcagtga atcgggaata aaatcggaaa tgttcgcaac cttttttttg cgaagcgagt
     8821 ctgacttcct ccaggcgctg tcttcgtatt ggtaaaaagt aagatatggt ttttcctgcg
     8881 acactaaacg ctttgttatg ttgtttccta agctctgcac cgagtcaatg gacatgttca
     8941 attggtgcac ggtaagcatt ttcgggtccc atttaaataa gctgtcttcc gtgcgggtca
     9001 tctggaaact gctcaggtca aaatcttttt tgtattcttt aaagccgagc cggataaagt
     9061 cagatgaact ggcatagcgg ttcccattct cctggtagtt ccatccatcg cgaagcgtaa
     9121 attccaggaa atgtttatcg ggcgtaacct tcatggtgcc gctccgagca gtcaagaagt
     9181 tatcctggag cccataggtc ttttcgtaaa taaccacatt gcgaatagtg ctgtcgtctt
     9241 tttctttctt gccgatcttg atcacaaacc cttcgatctt atcataaaat accccttctt
     9301 taatatcaag ggcaggtttc gttacaatga tgtcgtactt aagcgcgttc aatttcaggt
     9361 ttgcgaccgg aataatattg ttggcaaata aaaaagcgac gccgcttatt aatacggcaa
     9421 cgatcagcaa tggcatcatg aaccgtaaca atggaatgcc cgccgatttg atcgccacga
     9481 gctcgaaact ttccccgaga ttcccgaacg tcatgatgga agacaaaagc agtgcgagcg
     9541 gtaaagcaag gggcaccgcc gtagcaccta cgtaacctat caattttaga atggtaaaaa
     9601 catccaggcc ctttcccacc agatcgtcaa tatacagcca gaagaattgc atcaccagca
     9661 caaacagcga gatcagaaac gtggcgatga atggcgcgat aaaagctttt atgatgagtt
     9721 tatcgagttt ttttatcact ttgcgcccgg tttaaaatca ttatggtggc tacaaatgta
     9781 gagctttcaa aaactgaatt agaacttgtc acaagcagcg acgtcatttt aacaaagaat
     9841 agaatcattg aaaaagtgta cgcgttgttc ggatcgctga gtgaagggta ccggaacatc
     9901 ctcgctaaat attcgcacga cttgccagtt gaaatatttg aaaaggcacc gaagatctat
     9961 cgcggcgaaa actatatggc acttccttac gtgatgctcg attatccgag gatatttgga
    10021 aaagaggaag tgtttgcaat acgtagcttt ttctggtggg gaaatcattt cagtatcacg
    10081 cttcagcttt cgggcaatta tatgacaatg tatgcgcaga acatcgtcac ccaactgcac
    10141 gacaggaaag aggagacatg gtttatcggc acaaacgagt ctgcatggga acatcatttt
    10201 aaagaagaca attatttgcc tttaagagag atttcgctgc cggctttcac gcagagatcg
    10261 tttgtcaaga tcgcaaaaaa aattccgctc atcgagtgga caagtgcaga agattttttt
    10321 ctaaaaaact tcaatgaatt actggggttg gtgcgcagtt aatttccgag gcggtgaaag
    10381 aggtctttaa cctgtgtttc ccaaagttgc gattggtctt tgatctcagc cttttcagcg
    10441 aagtctctta taacaaggat agtttggttc gttatttcag tcttctcgat tcgaaattca
    10501 aagtattcat ccttcgcgct ggtcaaccat ctaaagcgga taaatttatc gatctcagaa
    10561 tccacaactt ctgctttttc cacagaaccg ttccatgaga acataaagac attatctctt
    10621 tcgtcaactt tatctgcaaa ccattcctgt aagcctgcgg gtgttgaaag aaatccatat
    10681 aagatcgtag gggaacatct caccgggtat tccaaagtga acatttgctt ttttgccatt
    10741 agcggacttt ttactgcctc cctggtgcag attttgttgt ttgcggcttg caataatatt
    10801 aaattattgt caccacaaaa atttttttaa agaagtattt ttcgcgcttt caaagagtat
    10861 acagtcgcct ttgtaaatca cacagatacc tgctgattta tagtcataac tactgcttat
    10921 cgaagagctt gcccgttatc aacacgaatg aagatcgcaa gtaaaaggat cacgctatat
    10981 attcgatggt atattcttgc cgctgaccaa aaaatcaagc catatacata tcagttcaga
    11041 gccgttttct ccgctttcgg tttatttaca tcctccggac gcgaattagt tcgttaattg
    11101 actgcggtgc agatcattct tcgatcaaac cgggacctgg tcatggggaa ttttgcgttt
    11161 tcggttaaaa ccaataattg cacatcatct taaaaataat cactttttat gcgaaaattt
    11221 ttacgactta ccattttgtt ttttatcagc gtttatgttt tgacttcaca cgcacagcca
    11281 gtaatgttcc ggcaaactgc agagcatact tcttacatct catcgaaaca ggactacgtt
    11341 tttggtgagc aagcgtggaa atttgagaca ggcgcagcaa tacggtcaac cgcggtttgc
    11401 agtaataaca ttgtttattt tggaaacagt aaaggaattt tatttgcgct tgacagatcg
    11461 tccggtgcaa taaaatggca atacaacgcc gggtatgcaa ttgcgtcttc accggcactt
    11521 ttgaacggga gtgttttatt caccgacaac aagcaatcgc ttcattcatt aaacgcatca
    11581 accggaaaac aaaactggca gcttgatttt ggtccaaact tgccgaacga atggggattt
    11641 gattattact attcctcgcc caccattgct gatggcaaaa tattcattgg cgcgaaagat
    11701 ggttttgttt acaacgtgag tgctgatgga aaggtcgcct ggaagtttaa agccgacaat
    11761 attgtaagaa gcacacctgc agtttcagac aaggcagttt tctttggaga tatcgacggc
    11821 attttgtacc gcgttgatgt tacaaccggg aaagagttat ggagattcaa aacaattggg
    11881 aatggtttga agaatgaaga ttttggtttc gacaggaggg cgatcatctc ctcgcctacc
    11941 attgcaaaag ataaagtgat cgttggctgc cgagacggat ttttttatgc tgtagataaa
    12001 aacacaggga aagagttatg gcatgttgat cacaacgttt cgtgggtgat ctcttccatc
    12061 gcagtaaaag atacgatcgc agtaaccggt acgtcggacg gaagatttgt gcaggcagtt
    12121 aatgtaaata caggcaaaga aatttggaaa ttcagaacgg tttcgatcgt gtggtcatcg
    12181 cccgtgatct acaacgacaa agtgtatatc ggaagccagg agggcgtatt gtattgccta
    12241 gacctgctaa ccgggaaaag aataaccgca ttccaggcaa agggaaaaat ttttacatcg
    12301 cctgttattt atgattcact gttatttttt ggaactgatg aagggaattt ttatgcgctg
    12361 cgtccatcac catatactta tccgcgacct gctgatataa agcggtatgt tttctggcag
    12421 caggatgttg acacttattt tcattacggc aatgataaaa agatcaacat ctatttaaac
    12481 gtaaatgggt acgagaccgt cgattcaaaa cagctcgctc aggttttaca aaaaacagac
    12541 tctgcaaaaa actccgtgat cgtttttgca gcaaattttt tcccgaagga aattctttca
    12601 ggcggtgcac aatcgctgtt gcggcaatat ttgaataatg gcggaaggat cgtcgtgctt
    12661 ggaaataatc cgatcattta taaaatagat tcgacaggaa atatggcggg atttgatttt
    12721 acaact
//
LOCUS       DASQJI010000660         3487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1315577,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000660 DASQJI010000000
VERSION     DASQJI010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315577"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VEV83_17890"
     CDS             complement(<1..480)
                     /locus_tag="VEV83_17890"
                     /inference="COORDINATES: protein motif:HMM:NF019556.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /protein_id="HYK47056.1"
                     /translation="MKLLFVLVLSALLFKMRLSAQKIQYYTPINFSEVQITDHFWKPK
                     IDLVATKSLQACIYQTEIATPRIQNFINAAHHTGKFKGIYYDDSDVYKALEAMAYSLK
                     NHPDTAIENTADRWIGYVAAAQMPDGYLDTYYQLGDISKRWTELEKHEDYNAGHLIEA
                     "
     gene            complement(546..899)
                     /locus_tag="VEV83_17895"
     CDS             complement(546..899)
                     /locus_tag="VEV83_17895"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HYK47057.1"
                     /translation="MQKLYDTKNLLDTHQGDTEFIKHIARLFIQHMPVMLGELKKAFA
                     DRDWQNMYFYAHKMKASIDLFAVTGLAETIRAVEQQAKAGVPADNLGQLVADVDRVIT
                     ECVGQMKEEYEIVTE"
     gene            complement(902..2281)
                     /locus_tag="VEV83_17900"
     CDS             complement(902..2281)
                     /locus_tag="VEV83_17900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYK47058.1"
                     /translation="MSREAVTIFVVDDDVVYCSSIAHYLSLNPDYRVKTFFSAKEFIN
                     NLHDKPDIVTLDYSLPDMKGDEALSQLIEVSPETKTIVISGQEDIQVAIDLFKKGVHD
                     YIVKDADTQQRLWMAIQNLRETIELKKEVEALKQEVEKKYNFHNMIVGNSPAIKKVFA
                     LMAKAASTNITVSITGETGTGKELVAKSIHFNSTRKKHSFVPVNVAAIPRELLESELF
                     GHEKGAFTGATNRRIGKFEEAHNGTLFLDEIGEMDMNMQAKLLRALQEKEISRIGSNE
                     IVKINVRIIVATHRNLQDEISKGKFREDLYYRLLGLPIELPPLRERENDILLIAKFFI
                     DQFCKENDLGKKHLSVDAKHRLMEFSFPGNVRELKSIVELACVMTEEEEISDDHLQMN
                     QTLTRTIGNGNGNYTLREYTTRIIQQYLDKYDYDVLKVADKLDVGKSTIYRMINNREL
                     KVAKRKLEV"
     gene            2444..2749
                     /gene="gatC"
                     /locus_tag="VEV83_17905"
     CDS             2444..2749
                     /gene="gatC"
                     /locus_tag="VEV83_17905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HYK47059.1"
                     /translation="MKITDEMIEHLADLARLRFTEDEKEGLKYDLERMIGFVEKLREV
                     NTEGVEPLLYITGAENVLREDEVITSISRQEALLNAPLTDGNFFKVPKVIKKGAEPS"
     gene            2865..>3487
                     /locus_tag="VEV83_17910"
     CDS             2865..>3487
                     /locus_tag="VEV83_17910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK47060.1"
                     /translation="MGSNSLEVLRGITLSILKNEYVALMGPSGSGKSTLMNIIGCLDT
                     PSAGTYILNGHDVSKMSDDDLAEIRNSEIGFVFQQFNLLPRLSAAENVALPLIYAGVA
                     RKERMDRAMVALEKVALQDRSHHKPNELSGGQIQRVAIARALVNNPSILLADEPTGNL
                     DSKTSIEVMQIFGQIQAAGNTVVLVTHEEDIAGYAKRVVRLRDGLVE"
BASE COUNT          914 a          797 c          735 g         1041 t
ORIGIN      
        1 agcttcgatc aaatggcccg cattgtagtc ttcatgtttt tccagttctg tccaacgctt
       61 cgaaatatcg ccaagctggt aataagtatc caggtaccca tctggcattt gtgcagcggc
      121 gacgtaaccg atccacctgt ctgctgtatt ttctatcgcc gtgtcaggat gattctttag
      181 cgaatacgcc attgcttcaa gcgctttata cacgtcgctg tcgtcataat aaattccctt
      241 gaattttcct gtgtgatgcg cggcgttgat aaagttttga atacgtggtg tagcgatctc
      301 tgtttgataa atacaagcct gcaacgattt ggtcgcaact aggtcgatct ttggtttcca
      361 gaagtgatct gtgatttgaa cttcagaaaa atttatgggg gtgtaatatt ggattttctg
      421 cgcgctgaga cgcattttaa aaagcaaagc cgaaagaacc aggacaaata atagtttcat
      481 attttgacat tactcggcat aaaaataaaa tgttttgcaa caaacgtttg caagaaaatt
      541 gactattatt cagtcacgat ctcatactcc tccttcatct gccctacaca ttctgtaatg
      601 acgcggtcaa catcagccac caattgtccc aaattatccg ccggcactcc cgccttcgcc
      661 tgctgttcca ccgctcgtat cgtttcggct aatccggtaa cggcaaacag gtcaatgctc
      721 gctttcattt tgtgcgcata gaaatacatg ttttgccagt cgcgatctgc aaatgctttt
      781 ttcagttcgc ccagcataac gggcatatgt tgaataaaaa gtcgggcaat gtgtttaatg
      841 aattctgtat ctccctggtg agtgtctaat agatttttgg tatcatacaa tttctgcatg
      901 ctcagacttc cagttttctt tttgcaacct tcaattcccg gttgttgatc atccggtaga
      961 tcgtagactt tccaacatcg agtttgtctg ctactttcag cacatcgtaa tcgtatttgt
     1021 cgaggtattg ctgaattatc ctggttgtat attctctcag tgtgtagttg ccgttgccat
     1081 ttccaatcgt cctggttaaa gtttgattca tctgcaaatg atcgtcagag atctcttctt
     1141 cttccgtcat tacgcaagca agctcgacaa tcgatttcag ctcgcgaaca tttccgggaa
     1201 aagaaaattc catcaaccta tgcttcgcat cgaccgacaa atgttttttg ccgagatcat
     1261 tttccttgca gaactggtcg ataaaaaatt ttgcaatgag cagaatatcg ttttcccgtt
     1321 ctctcaatgg cggcagctcg atgggcaatc ccagtaacct gtagtacaag tcttccctga
     1381 atttgccttt tgagatctca tcctgcaaat tgcggtgtgt agctacgatg atgcggacat
     1441 tgatcttaac gatctcattg ctgccgatgc ggctgatctc tttttcctgc aacgcacgca
     1501 gcaactttgc ctgcatattc atatccattt caccgatctc atcaagaaaa agcgtgccgt
     1561 tatgcgcctc ttcgaactta ccgatccgtc gattggtggc acctgtaaaa gctcctttct
     1621 catgaccaaa taattcgctt tcgagcaatt ctcttggaat agccgcaacg tttaccggta
     1681 caaacgaatg ttttttcctg gttgaattaa agtgaattga cttcgctaca agttcttttc
     1741 ccgtgcctgt ttcacccgtg atcgataccg taatgttcgt agacgctgct ttcgccatca
     1801 acgcgaatac ctttttaatg gccgggctgt taccaacgat catgttgtga aaattatatt
     1861 tcttctcaac ttcctgtttt agcgcttcaa cttctttttt taattcgatc gtttccctaa
     1921 ggttttgaat agccatccac agccgctgct gtgtatccgc atccttaaca atataatcat
     1981 gcactccttt cttgaacaga tcgatcgcta cttgtatatc ttcctgaccg gagatgacaa
     2041 ttgtctttgt ttccgggctt acttcaatta gctgtgagag cgcctcatcc cccttcatgt
     2101 ccgggaggga gtagtcaagc gtcacaatgt cgggcttgtc gtggagatta tttatgaact
     2161 cttttgcgga aaagaatgtc ttcaccctgt aatcaggatt aagagataaa tagtgagcaa
     2221 tcgaagaaca atacaccaca tcatcatcaa ccacaaatat cgtaacagct tctcttgaca
     2281 taacggtttt ccttgtgcaa tgtaagacaa tttaaaaaac tgtttacggg tacttctcat
     2341 taaatgaaac cgctgctaat tttttcctgc ctaccttgga cgcaaaagtt atttttgtgt
     2401 tttgcaaaat aaactgtagg aactttagta atgtttgtca cacatgaaga ttacagatga
     2461 gatgatagag cacctggctg acctcgcgcg gcttcgcttc acggaagacg aaaaagaagg
     2521 cctgaaatat gatttggagc gaatgatcgg ttttgtcgaa aagctccggg aagtaaatac
     2581 cgaaggcgtt gaaccgttgc tttatataac tggcgctgaa aatgtgctgc gcgaagacga
     2641 agtgattaca agtatctcaa ggcaggaagc attattgaat gcgccgctga ccgatggcaa
     2701 cttttttaaa gtaccaaaag tgataaagaa aggtgccgaa ccatcgtaat cattttatta
     2761 ctcatcactg ccattcatta ctgatcactc attactcatt attcatcact catttcatta
     2821 tgcaaccagt catagaatta agtcagatac gcaaaacgta tttcatgggc tcgaactcgc
     2881 tcgaagtttt gaggggcatc acgctcagca ttctcaaaaa tgaatacgtt gcgctcatgg
     2941 gtccaagcgg cagcggtaag agtacgttga tgaatattat tggttgcctt gacacgcctt
     3001 cagccggtac ttatattttg aacggccatg atgtaagcaa gatgtctgat gatgacctgg
     3061 ctgagattcg caatagtgag atcggctttg tttttcaaca gttcaatctt ctgccccgcc
     3121 tcagcgccgc ggaaaacgtg gcactgccgc tgatctatgc aggcgtggca aggaaagaaa
     3181 gaatggaccg cgcgatggta gctttggaaa aagttgcgct gcaagacagg agccaccaca
     3241 aaccaaatga gctaagcggt ggtcaaattc agcgtgtcgc gattgcgagg gccctggtaa
     3301 acaatccatc tattttactg gccgacgagc cgaccggaaa cctcgacagt aagacatcga
     3361 tcgaagtgat gcagatcttc ggacaaatac aagctgcagg caacaccgtt gtattggtta
     3421 cccatgaaga agacattgcc ggctatgcaa aacgggtggt gcggttgcgc gatggccttg
     3481 ttgaaag
//
LOCUS       DASQJI010000661         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2700425,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000661 DASQJI010000000
VERSION     DASQJI010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2700425"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..871
                     /gene="cobA"
                     /locus_tag="VEV83_17915"
     CDS             20..871
                     /gene="cobA"
                     /locus_tag="VEV83_17915"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HYK47061.1"
                     /translation="MKNEHFNGKVILASAGPGDPELITIKTANYLNLADVVLTDRLVS
                     SELLELYVNANAEIVHVGKQAGRNTSTSQQSINELMVHFALQNKLVVRLKGGDTSVFS
                     NVLDELEALIENNIPYEIIPGVTAALGAAAFAGIPLTARNYSNAVRFLTFYKPDTISE
                     KGWEELAETDDTLVFYMSSEKLSELVSGLRQHGISDGKLLAVVEQATTSLQNVTITNL
                     YEFEERCCGKTFLSPSLVIIGKVVALHDRFKWFSNVHSAEHYFKPLRHITLDGSNSNH
                     EQKLVRC"
     gene            865..>2106
                     /locus_tag="VEV83_17920"
     CDS             865..>2106
                     /locus_tag="VEV83_17920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HYK47062.1"
                     /translation="MLVEAKLKTLKDLVRSSSKDEMIWIHGYLSAILASGQEEPQTAE
                     IKASAKKITLAYGTETGNSKKLATDFAVKAKQKGVNVKLVSLDQYRLSDLQKEEYFFS
                     IISTQGDGEPPAAAKKFYDHIHTDNLQLPQLNYGVLGLGDTSYPLFCKAGEDVDERLQ
                     KLGARRLVNIEKCDTDYEASADKWFAGVLEKINSTPAEPTVSRHVVNKPTTGKKIYKG
                     TIVNNINLNDKGSKKETHHIEIVADAVEYLPGDSIGVIPENKLSCVETILELTSIQRD
                     KVLSYRNQPSTVFELLKRKLNIGQLPQRVVKKYAAIVEQDIPEQDISIIDLLKIYPVK
                     DSQQFEEVIQILEPITPRLYSISSSPQAHEGEVHITVARDKFYVNEEQRYGLCSDLLT
                     QMADDAHIEFYVQKNNQFRLPA"
BASE COUNT          650 a          462 c          487 g          507 t
ORIGIN      
        1 ataaattatt cgtttaaaga tgaagaacga acactttaat ggaaaggtaa tcctggcttc
       61 ggccggcccg ggcgatccgg aactcattac cataaaaacg gcaaattatc ttaacctggc
      121 tgacgtggtc ttaaccgaca ggctggtgag ttcagagctg ctcgaattgt atgtgaacgc
      181 aaatgcagag atcgttcatg ttggcaagca ggccgggcgc aatacttcca cctcacaaca
      241 gtcgatcaat gagttgatgg tgcactttgc gttgcagaat aagttggtcg tgcgattaaa
      301 aggcggcgat acttccgttt tttccaacgt gctcgatgag ctcgaagcgt tgatcgaaaa
      361 caatattcca tacgaaataa tcccaggcgt aacagcggca cttggcgctg cggcattcgc
      421 aggaattccg ctaaccgcga gaaattactc taacgccgtt cggtttctca ctttctataa
      481 gcccgacacc atctccgaaa aaggctggga ggaattagca gagactgacg atacccttgt
      541 tttttatatg tcatcagaaa aacttagtga gcttgtttcg gggctacggc aacatggaat
      601 ttctgacggt aaattactgg ctgttgtgga acaagccaca acgtctttgc agaatgtaac
      661 catcacgaat ttgtatgaat ttgaagagcg atgttgcggt aagacattcc tctcaccatc
      721 actggtgatc attggtaaag tagtagcgtt gcacgacaga tttaaatggt tctcaaatgt
      781 tcactcggcc gaacactact tcaaaccact tcggcacatt acgctcgacg gttcaaattc
      841 caatcacgaa caaaaattag taagatgtta gtagaagcca aacttaaaac actgaaagac
      901 ctcgtgagat catccagcaa ggatgagatg atttggatac acggttatct ttcggcaatc
      961 cttgcaagcg gacaagaaga accacaaact gcggagataa aagcttccgc taaaaagatc
     1021 acgcttgcct acggcactga aaccggcaat tcaaaaaaac ttgccactga cttcgcggtg
     1081 aaagcaaaac aaaaaggtgt gaatgtaaag ctggtaagtc ttgatcaata ccgtttatcc
     1141 gatcttcaaa aagaggaata tttcttttca ataatcagca cgcagggcga cggggaacct
     1201 cccgcagctg cgaaaaaatt ctacgaccac attcatacag ataacctcca gttgccgcaa
     1261 ttaaattacg gagtattggg cctgggtgat acgtcgtatc cgttgttctg caaggccggc
     1321 gaggacgttg atgaacgcct gcaaaaatta ggggcacgac gtttagtgaa tatcgaaaaa
     1381 tgcgataccg actatgaagc cagcgctgat aaatggttcg caggcgtgct cgagaaaatc
     1441 aattcaacac cggcggagcc cacggtgtcc aggcatgtag taaataaacc aacgacagga
     1501 aaaaagattt acaagggtac gatcgtgaac aacattaatt taaatgacaa aggttcaaag
     1561 aaagagacac atcacataga aattgttgcc gatgcggttg aatatttgcc cggtgattca
     1621 atcggtgtaa tacctgagaa caagttaagc tgtgtggaga caattcttga gctcaccagc
     1681 attcagcgcg ataaggtcct ctcctatcgc aaccagccat caacggtgtt cgagctgctt
     1741 aaacggaagc ttaacattgg ccagcttccg cagagggtcg taaaaaagta tgctgcaatt
     1801 gttgagcagg acatacctga acaggatatc agcattattg acctgttgaa aatataccct
     1861 gtaaaagact cacaacaatt tgaggaggtt atccagatcc tagagcccat aacgccgaga
     1921 ttatattcga tctcgtcgtc gccgcaggct catgaaggcg aagtgcatat cactgttgca
     1981 cgggataaat tttatgtaaa tgaagagcag agatatggtt tgtgttcgga cctgttaacg
     2041 caaatggcag acgatgcgca cattgaattt tatgtacaaa agaataacca gttccgcctc
     2101 ccggcc
//
LOCUS       DASQJI010000662         5158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1932325,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000662 DASQJI010000000
VERSION     DASQJI010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932325"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VEV83_17925"
     CDS             <1..366
                     /locus_tag="VEV83_17925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HYK47063.1"
                     /translation="MIDFHLSVRPVATLATTHRNTSRYFLFNEENVLCGWRNIKTGDE
                     KLPRASATLVPRAFSGIHIINPGIFSLMRSTEKKFSMVDFYLSICSMHKIASFEHAAG
                     NFIDVGTVESVAKAGELFN"
     gene            547..3003
                     /locus_tag="VEV83_17930"
     CDS             547..3003
                     /locus_tag="VEV83_17930"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HYK47064.1"
                     /translation="MLKQSCFRLAALIAFLILMAGYSSAQDLLRNYDLSSVKVDKLSD
                     AEIAKFKQQLDASGLTEDQAEQIAISKGMPVTEVQKLRIRLQSLPKTATTTKTTPFQS
                     NSIGNYNNPVDTPSNPNISLVDTTTRKPLINPRIFGSELFNDASLTFQPMVPIATPLN
                     YIVGPGDQLNLNVYGVQETAMTVPVTPEGNAVIPNVGQVQVAGLTIENATQKIKNVMG
                     RTAYPTLRSGSSKLSINTGQIRSIGITVIGSNRPGNYTVPSLSTTFNALFIAGGPSEF
                     GSFRQIELVRNNKLLKTIDLYSFLTKGDGSDNMTLNNNDIIRIPAYKTRVIIDGYVKR
                     PGIFEMLPGETLQDLLDYCSGFSDSAYTNSVKIMQFTGREMSVKDINAPNFGQYVMQR
                     GDSVIVSKVLNRFTNRVFIQGAVFREGAYELTEGMTVNDLINKADGLREDAFMQRAQI
                     FRLKNDLSKEMVSFNPGSEAEKNIPLKREDSVVIASIFDLKDDYYVSVLGEVRTPGYY
                     DYRDSLTLKDIILQAGGFTDAAFPQKIDVARLIRRDTLTAKDVRASTIIQVNGMEDLS
                     SPQKNITLQPSDLITVRRKPGYLAFQTVMVTGQLQYPGPYVMEKRDERVSDLIKRAGG
                     FTPEADPEGAYIKRYNLDKTNSVRQQTIINIQQQLNDSSNIVQQDIKKQYDQIPLNIS
                     KLLSQPNSPEDVILIAGDELIVPKYNAEVRISGSVLFPTQIPYNQRYNLKDYISSAGG
                     VAENGKKNKIYVVYANGKAASSHGFLFFKNYPDVKPGTEIVVPAKEEKRRLTTGEFIG
                     IASALASLAGVVIAILNTTK"
     gene            3019..4065
                     /locus_tag="VEV83_17935"
     CDS             3019..4065
                     /locus_tag="VEV83_17935"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HYK47065.1"
                     /translation="MAENITDKDQISLKEILLTIRDWIAFLFSKWLIILIVGLIGGAL
                     GFLYAALSKPQYSASIDFILANSDENNTNLMGLASQFGINLGTTSDDAFRGNNIIALM
                     KSRRMVQKALLMRPPGASESLLNIFCRDNKLPDSWKKDARLSKIYPFPDSLSQMSRTQ
                     DSIFREIYDGVQKDNLEISLPNKDQTIYNVTTTSRNEIFSFYLTKYVADVTSAFYIET
                     KTSVAKSNLSMLQHEADSLRNLLGAAITASGSETDFTFNLNPAYQVQRSASQKSQMQA
                     TVLGTAYGEVVKNLELAKITLQKQTPLYQIIDEPSLPLKMETKSKLVYLLAGGFFAGI
                     IICIWLMIRRVLSS"
     gene            4115..>5158
                     /locus_tag="VEV83_17940"
     CDS             4115..>5158
                     /locus_tag="VEV83_17940"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYK47066.1"
                     /translation="MNFKRGFLKNLLITGGFTYLAQVIVFLGSIITSRLLQPSDFGIV
                     ALIAVFSGFISMFSDSTISFGVIRCPYRYTYHRGIHVISIITGVSLSLLTVAILYPVS
                     LFYKNTTIILPGVAVAVLFIIKAFNVVPIAVLQKQLKFAAAGKIVLIATLCGIVCSIL
                     LALAGFKYWSLIWSQYVITIVTWLLLYNTSGYSLYTRRKKIIVKSFLLTRSVIGRLIG
                     FNTVNYWARNADNLLVGKYYGTADLGIYSRAYQMLTLPLALITGIFTTVLYPSLVRYK
                     ERGGDVENEYAFVLKLISFINFPLAVLLLLLPKQFVHILWGDQWMMVAQLLPYFGVLI
                     LSQTLFSTLGTILL"
BASE COUNT         1506 a         1091 c         1098 g         1463 t
ORIGIN      
        1 atgatagatt ttcatttgtc ggttcggccc gttgcaacgc ttgccacaac acatcgtaat
       61 acgtcccgct attttttgtt taatgaagag aatgtgcttt gcggctggcg aaacattaag
      121 acaggcgacg aaaaacttcc acgcgcatct gcaacgttgg tgccgagagc gttcagcggt
      181 attcacatca taaaccccgg aattttttca ttaatgcggt caaccgaaaa aaagttttcg
      241 atggttgact tttatctttc gatctgcagc atgcacaaaa tagcttcttt cgaacatgca
      301 gccggcaatt tcatagatgt gggaaccgtc gagagtgttg caaaagccgg ggagttgttt
      361 aactaaaaag cagcaaaacc ttgtaaaatt caaaccctta tatttgcatt tgctgaattt
      421 cttgtattga atgggttgcg tgtttaaagc tatagtataa tgccttcatc actttatgga
      481 aggctttctt attttatata tgtaactcag atggcggagc tttcggttca catttgaact
      541 taattcatgc taaaacaaag ttgttttcgc ttagccgcgt tgattgcctt tcttatttta
      601 atggccggct attccagcgc gcaggatctc ttgcggaact acgatctgtc gtcagtgaaa
      661 gtggataaac ttagtgatgc agagatcgct aaattcaaac aacaactgga tgcatccggg
      721 ttaaccgaag atcaggcaga acagatcgcc atatcaaaag gaatgcctgt aacggaagtg
      781 cagaaactgc gcatcaggct gcagagttta ccaaaaacgg caacgacaac aaaaaccaca
      841 ccctttcagt caaattctat tggcaactac aacaatccgg ttgatactcc ttcgaaccct
      901 aacatttctt tggtggatac aaccaccagg aagcctttga tcaatccgcg gatcttcggt
      961 tccgagctat ttaacgacgc gtcgctgact tttcagccca tggttcctat cgccactcct
     1021 ttgaattata tcgtcggtcc tggcgaccag ttgaatttga atgtttatgg cgtgcaggaa
     1081 actgcaatga ccgtccctgt tacgcctgaa ggcaatgcgg ttattcccaa cgttggccag
     1141 gttcaggtcg ctggtttgac cattgagaac gcaacacaaa aaataaaaaa tgtaatgggc
     1201 aggacggcat atccaacgct acgttccggt tcatcaaagc tcagcattaa taccggccag
     1261 atccgaagca ttggcataac tgtgatagga agtaacaggc ctggcaatta cactgtgccc
     1321 tctctttcca caactttcaa tgcgttgttt attgcaggag ggccgtctga atttggaagt
     1381 ttcaggcaaa tagaattggt aagaaacaac aaacttttaa agaccattga tctctacagt
     1441 tttctcacga agggtgacgg aagcgataac atgacattaa acaacaatga tatcatcagg
     1501 ataccggctt ataaaacaag agtgattatt gacggctacg tgaagcgccc cggcattttc
     1561 gaaatgctgc ccggtgaaac cttacaggac ctgcttgact attgttccgg tttttcggat
     1621 agcgcttata caaactcggt caaaataatg cagtttacag gcagagagat gagcgttaaa
     1681 gacataaacg cgcccaattt cggccagtat gtaatgcagc gtggcgatag cgttattgtg
     1741 agcaaggtct tgaacaggtt tacaaacagg gtctttatcc agggtgcagt ttttagagaa
     1801 ggcgcctatg aacttaccga aggcatgacc gtgaacgatc ttattaataa agcagatggt
     1861 ttgcgcgaag atgcgtttat gcaacgggcg caaattttcc ggctgaaaaa tgatcttagc
     1921 aaggagatgg tgtcatttaa tcctggcagt gaagcagaaa aaaacattcc cctaaaacgt
     1981 gaagattctg tcgtgatagc ttccatattt gatttgaaag atgactacta tgtatcagtt
     2041 ctcggcgaag ttagaacgcc cgggtattat gattaccggg atagtcttac actaaaggac
     2101 atcattttac aggcgggtgg ttttactgac gctgcgtttc cccaaaaaat agacgttgca
     2161 aggctaattc gcagagacac attaacggcg aaagatgtaa gagccagcac gatcatccag
     2221 gtaaatggga tggaagacct ttcatcgcca caaaaaaata tcacactgca gccttcggat
     2281 ctcatcactg tacgacgaaa gccgggttac cttgcttttc aaactgtaat ggttaccggg
     2341 cagttgcagt acccgggccc gtatgtaatg gagaagagag atgagcgtgt gagtgatctt
     2401 atcaaacgtg cgggcggctt cactcctgaa gcagatccgg aaggtgctta catcaagcga
     2461 tataatctcg ataaaacaaa ctccgtgcgc caacaaacga taataaatat tcaacaacag
     2521 ctcaacgatt cttcaaatat tgttcaacag gatattaaaa agcaatatga tcaaattcct
     2581 ttaaacattt ccaagctgct tagtcagcca aattctccgg aggatgttat attaatagcg
     2641 ggcgatgagt taatagtacc gaagtacaac gcagaagtga gaataagcgg gagtgtttta
     2701 ttcccaaccc aaatcccata taaccagaga tataatttga aagactatat ttcgtcagcc
     2761 ggtggtgtcg cggaaaatgg aaaaaagaat aaaatctatg tcgtgtacgc taatggaaaa
     2821 gcggcatcat cacatggttt tctcttcttc aagaattatc ccgatgttaa gcccggcacc
     2881 gaaattgttg tacccgctaa agaagagaaa agaaggctta ccacgggaga atttataggt
     2941 attgccagtg cactggcatc attggccggc gtagtgatcg ccatattaaa tacaaccaaa
     3001 taactgtttt cgtttttgat ggcagaaaac ataactgata aggatcaaat atcactaaaa
     3061 gaaattctgc tcacgattcg tgactggatc gcgtttcttt tttcaaaatg gcttatcatt
     3121 ttgatcgtcg gcctcatcgg cggcgcatta ggttttttat atgccgcgtt gtcgaagccg
     3181 caatacagcg cctcgatcga ttttattttg gcgaattctg atgaaaacaa tacgaatctc
     3241 atggggcttg caagccagtt cggcatcaac cttggcacaa ccagtgacga tgcatttcgc
     3301 ggaaacaata tcatagcctt aatgaaatcg aggagaatgg tgcaaaaagc tttattgatg
     3361 agacctcccg gggcatctga gtcgctgttg aatatttttt gcagggacaa taagttacct
     3421 gattcatgga aaaaggatgc caggcttagt aagatctatc ctttccctga ttcactttcg
     3481 caaatgagca ggacccagga tagcattttc agggaaatct acgacggcgt gcaaaaagac
     3541 aacctggaaa tttcattacc taacaaggat caaacgatct acaacgtcac aaccacttca
     3601 cgcaacgaaa tattttcctt ctaccttact aaatacgttg ccgatgttac ttcagcattt
     3661 tacatcgaaa ccaaaaccag tgtagcaaaa agtaatctaa gtatgctgca acacgaagca
     3721 gacagtcttc ggaatttgtt aggcgctgcc ataacagcgt ctggttcaga gaccgatttt
     3781 acatttaatc ttaatcctgc ataccaggta caacggtctg cttcccaaaa gagccaaatg
     3841 caagctacag tgctcggaac tgcctatggc gaagtagtaa aaaatcttga gcttgctaaa
     3901 attacattgc aaaaacaaac accattatat cagatcatcg atgagccttc acttccactg
     3961 aaaatggaaa caaaaagcaa gctggtatat ttactggccg gtggtttttt cgctggcatt
     4021 attatttgca tatggcttat gatacggagg gtactttcca gctgaatgaa cctttagatt
     4081 ttcactgttc gacgaccgcc actcatttta tttcatgaac tttaagagag ggtttctaaa
     4141 aaatttactg atcacaggcg gttttactta cctggcacag gtgatcgttt ttttaggcag
     4201 catcataacg tcccggttac tccagccttc cgactttggc attgtcgccc tcatcgccgt
     4261 tttttctggt ttcataagca tgttttcaga cagcactatt tcttttggcg taattcgttg
     4321 cccgtaccgt tatacttacc acaggggtat tcatgttatt tctataatca caggagtatc
     4381 actttccttg ctaacggttg cgatcttata tcctgtttca ttgttttata agaatacaac
     4441 aataattctt ccaggcgtag cggtggcggt gttattcata ataaaagctt tcaacgttgt
     4501 tcccattgct gttcttcaga aacagttgaa gtttgcagca gccggaaaga tcgttttgat
     4561 cgccacttta tgcggcatag tatgttccat acttttagca ttggccggat ttaaatattg
     4621 gtcactgata tggtcacaat acgtgatcac cattgtaaca tggctgctgt tgtataacac
     4681 atcgggttat tctctttata cccggcggaa aaaaataatt gtaaaatctt ttctactaac
     4741 acgatcggta ataggcagac tgattggttt taacactgtt aattattggg cacgaaatgc
     4801 cgacaatctt ctcgtaggga aatattacgg cacagcggat ttgggaattt atagccgcgc
     4861 ctaccagatg cttactcttc ccctcgcact gatcaccggc atatttacaa cggtattgta
     4921 tccaagcctg gtgcggtata aagagcgtgg cggcgatgtt gagaacgaat atgcgtttgt
     4981 tttgaaatta atatcgttta ttaattttcc actcgccgta ttacttctat tattacctaa
     5041 acaatttgtg catatacttt ggggtgatca atggatgatg gtcgcccaac tgttaccgta
     5101 ctttggagtg ttgatacttt cacagacatt attttcaaca ttaggcacaa ttctatta
//
LOCUS       DASQJI010000663        19168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1779624,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000663 DASQJI010000000
VERSION     DASQJI010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 19168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19168
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1779624"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VEV83_17945"
     CDS             complement(<1..440)
                     /locus_tag="VEV83_17945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HYK47067.1"
                     /translation="MKQEMEYINSLEFAQKLDEQDPLAHFRDKFFIPQHQGKDCIYFT
                     GNSLGLQPRSVKDYIQQELDDWARLGVEGHFNAKNPWLSYHEIFPDQLCNIVGCFRHE
                     VVAMNQLTVNLHLLMVSFYRPTKERFKIICEAKAFPSDQYALES"
     gene            complement(455..925)
                     /locus_tag="VEV83_17950"
     CDS             complement(455..925)
                     /locus_tag="VEV83_17950"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HYK47068.1"
                     /translation="MLRDRCKDYLPSVEDRSMSQIINTDKAATPLGSYPHARRVGNLL
                     FLSGIGSRNPVDNSIPGLKLDAEGNVLHYDIEAECHAVFANVKAVLEASGSGWDKIID
                     VTVFLTNIKDDFTIYNTIYGEYFKDVQACRTTVEVKSLPTKIAIELKVIATIDG"
     gene            complement(950..3085)
                     /locus_tag="VEV83_17955"
     CDS             complement(950..3085)
                     /locus_tag="VEV83_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HYK47069.1"
                     /translation="MRRITIIVLLSWFIIRSHAQSNELTEQLGNIKLEFRLGDSGIAE
                     YAVYFKDHVVIKPSALGFNLKNNPALRYFKIIRSERKTFDETWKPVWGEVSQIRNHYN
                     ELKVYLQERNEPNRFLNIVFRVFQDGVGFRYEFPVQPHLKYFIIADELTQFNLTGDHK
                     TFWIPGDYDSNEYPYTTSKLSEVDGWKLPVLSTNSKEINEPDQYAVQTPLTMKTSDGL
                     YINIHEAALVHYPSMQLHVDRKSYTLSCNLVPNALGDKAYLRAPEVTPWRTIIVSDKA
                     TDILASKLILNLNDPSKIENTSWIKPTKFIGVWWEMQTGKGGWNYSNNLDSLDANGKL
                     VPNHRHSANTENVKRYIDFASKNGIKGLLVEGWNTGWEEWYGNWNGGPFDFVTPYPDF
                     DVKAIAQYAKQNGVNMIMHNETSADASTYERQMDTAFRFMNKYGYTSVKTGYVGSIVP
                     RGEHHDGQWMIDHYVRAADKAAQYHVMIDMHEPVRPTGLQRTYPNWLACEAGRGNEWN
                     AFSDGNLPEHETIMPFTRLMGGPMDYTPGIFKIKGYSAVVGRQVHTTLTKQLALYITM
                     YSPLQMAADLPENYEAHMDAFQFIKDVAVDWDDTKIIEAEPGDYITIARKAKNSSNWF
                     LGLITDENARTSSFKLDFLDPNKIYAATIYRDADDADWKNNPEAYTIEKVLVNSNTLV
                     NIKMAPGGGAAISLLPATSDQLKSWKEYK"
     gene            complement(3229..6552)
                     /gene="secA"
                     /locus_tag="VEV83_17960"
     CDS             complement(3229..6552)
                     /gene="secA"
                     /locus_tag="VEV83_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HYK47070.1"
                     /translation="MLNILSKILGGNKSEKDVKKIEPQVVQINHFFEQYQTLSNDELR
                     NKTNDFKQRIKAHLAEIDESIQSKKTEAEQLPESEMQARDALYKAADELKKDRDKKIE
                     EILLEILPEAFAVVKETARRFKESTELTSTATQLDRDLSVKKEYITINGDNSVYRNSW
                     MAAGNLITWNMVHYDVQLIGGIVLHQGKISEMATGEGKTLVSTLPAYLNALAGEGVHI
                     VTVNDYLSRRDSEWNGPLFEWLGITVDCIDKHQPNSEDRRKAYAADITYGTNNEFGFD
                     YLRDNMVHAPEEMVQRKHHYAMVDEVDSVLIDDARTPLIISGPVGRDNTTQQFFDLKP
                     RIEQLVEAQKRSVNQFLNEAKRKINEGDDDPKSGGLALFRAHRGLPKNTALIKFLSEP
                     GVRVKMQKSENYYLSDQQKEMPKVDEELWFYIDEKNNSVELTDKGIQLITKAGEDPNF
                     FILPDIGVELAVIDNDPNMPTEQKLHKKEIILNDYAVKADRIHTVQQLLKAYTLFEKD
                     VEYVVLDGAVKIVDEQTGRILEGRRYSDGLHQAIEAKENVKIEAATQTYATVTLQNYF
                     RMYHKLAGMTGTAETEAAEFWDIYKLDVVTIPTNVACVRKDEQDLVYKTKREKYKYVI
                     DMIEQLRNGGRPVLVGTTSVEVSELLSRMLQQKKIPHNVLNAKQHAREAQVVAEAGLA
                     GNITIATNMAGRGTDIKLGPGVKEAGGLAIIGTERHDSRRVDRQLRGRAGRQGDPGSS
                     QFFVCLEDDLMRMFGSERIAKVMDFAGYKEGEVIQHSMVTKSIERAQRKVEENNFGIR
                     KRLLEYDDVMNKQRTVVYTKRSHALFGERLALDIDNAFYDVADGLVNTFKERNDFEGF
                     KLETIVNLGLDTAITKEEFEKASHENLVPRLYEEALANYQNKRKELMRVALPVFHNIR
                     QSQGAHIENIMVPFTDGRRAIQVLTNLDKTIQSSGAELVSTLERSVTLFLIDDSWKEH
                     LRAMDDLKQSVQTAHYEQKDPLVIYKGEAFNLFRQMDSQVNSSIVSFLCHAELPVQQN
                     APVREARQQKTDMSKMHANKREVETAGQDYAANENDYYDPTPVKQEPVKVGPKIGRND
                     PCPCGSGKKYKNCHGRDEA"
     gene            6759..8393
                     /locus_tag="VEV83_17965"
     CDS             6759..8393
                     /locus_tag="VEV83_17965"
                     /inference="COORDINATES: protein motif:HMM:NF014543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47071.1"
                     /translation="MKKLAALFIFSLALLHVTGQTTTGRLENLKDGWDATIDYVGEIK
                     NGEPNGVGIAIYSNDFALRYAGNFLNGQYNGKGALLFKDGTFLSGEWKNGKLNGKGAY
                     LSKEGHLYVGSFVDGKKTGKGTFIFADKSLLTGEMKNDTYEGRCIYIPGQGKTISDNI
                     YADGKMKGSGYQYDIDSKNLSEGIWDDGTLTSSGTASYYSFLKSPNFYADKSDDQILM
                     GGVDKNNNLLQDTAFFYNLKDNSRYFGYCEKGYLSDGIIIKDSTAFIGKVKDDGAYGE
                     CSFYKIKKFYDEGNYQKDFLTGPNNLSIDLNKNTIYYGETSDRGLFSGKAWFANNYNE
                     LYVGNFQLGKFTGSGFLVFSNGKTVRGTFAKGNTITVTSLTDENGKPIPQKPKTFIDA
                     LTIITNEYADNYEAFKGAEANEGDYPVDDYYSAYNSIVSFPGSVDENVIAEDYDFYLS
                     FHAALYKGKSFAAAQAKYDELCKALSAASLNLKGSSTPVTLSGDVEEAKENATTRSKF
                     GLKNYSSLSDYNVYAEIKYDNGEYKVSIITGDIELD"
     gene            8458..9183
                     /locus_tag="VEV83_17970"
     CDS             8458..9183
                     /locus_tag="VEV83_17970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47072.1"
                     /translation="MKFSLPASLFICLTIGCSSHQIGNSKDVNPQTIFVDYTVTGEEN
                     DDSVTCWAQFRFAGEDGTTLVLNEPSSIRLDGTEIAVDSSEGMGAFYEKKFKTGLFAG
                     SHAWRYTDGEMNSYPSTFAFTPFSLASPLPSAVSRKDSLLIELDGLQNGTLITTALSD
                     TSSSTDDVIFKNKINDGRFTIPLSGCKMLSAGPVTVQISNTVDTTLAVGERPAEGGRI
                     FVTYALKERVVNLRDDSRGFASE"
     gene            9303..10184
                     /gene="atpG"
                     /locus_tag="VEV83_17975"
     CDS             9303..10184
                     /gene="atpG"
                     /locus_tag="VEV83_17975"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HYK47073.1"
                     /translation="MAGQLKEVRNRIKSVQSTQQITKAMKMVSAAKLRRAQEAILQMR
                     PYARKLQEMLSNIVSNIEGGTSLKLAEERAIERVLFILVTSDRGLCGGYNANLAKLAR
                     QAIADKYSSQLKKGNVVIWNIGKKGWESMTRTGYKTNDAYKDIFLNLTFENVQAVSQA
                     AMKAFESREFDAVELVYSEFKNAATQRFVVEQFLPIPKVQKKDGAKKADFIFEPDKEA
                     LIAELMPKILNTQLYKAVLDANASEHGARMTAMDKASENANELLKVLRVSYNRARQAA
                     ITTELTEIVSGAAALEG"
     gene            10542..11435
                     /locus_tag="VEV83_17980"
     CDS             10542..11435
                     /locus_tag="VEV83_17980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47074.1"
                     /translation="MKTRAFGANLLPLLALMMLFATVTIVACRKTETTAARTNSESGT
                     QSINSTNFAYVNSDLDDKDFDDAFSDSGDCKTVTFDTSKDVYPHTKTITYNNCFSECK
                     DGVLNGTKVVYNYVNPDSAHAGDLIKEVTYQDFTIDSVKVSGDVKVYLVSNDPYTLHV
                     VATRTLVISGKDGVTETVKTDHIRTLTSGGNTEDRSDDVYSVTGTSSGHEILHGGQVA
                     KYSVMIDPNDPVIKAADCCWRSSGTETVTIDLNSRGTKSTLTEVLDYGDGTCDNQATL
                     SINGGEAQTVTLPLRFWPLNP"
     gene            11696..12631
                     /locus_tag="VEV83_17985"
     CDS             11696..12631
                     /locus_tag="VEV83_17985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47075.1"
                     /translation="MKRQLFRVNLVPLAALLIMGVIVTMFACQKTESNRSQPTSDLNT
                     QFLNNTNFAVNDENLDDQDFEDAVALDEDAPLDNFNGSGGGGCKTITYDPSRDVYPHT
                     KTIVYNNCTSECKGGTINGTKVITVYVNPKLAKPGDLVKEIVYQNFTVDDVQITNDTK
                     TYLASNDPLTWHVVRTRTYVIGGKDGITQTSSSDLMRELIAGGDTQDNSDDMYAVTGT
                     TTGVENEHGGGLHGKYTSVIDETDPATAGANCCWRTSGTETINIEVREKGSTTSLTEV
                     LDYGDGTCDNQATLSINGGEAQAVTLPLYFWPLSQ"
     gene            12948..13805
                     /locus_tag="VEV83_17990"
     CDS             12948..13805
                     /locus_tag="VEV83_17990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47076.1"
                     /translation="MRIRYLLSLLVLVAAFNACQKEIKQTAATSSAISNTEVAPYDNL
                     VFSQNPAFVGQSVNISGSLQNNTAPDCGTLRIEQAVDGDGNPTSTALAVNWVSVADVT
                     PGTHATVSLDWVPTATGYFGFRLHFIPNESCNGEAYNGVPAPGMDLQVIESCSGLSVA
                     VTQASATLISGNLYSVHVCFTVNTCGEKYTDVKLQGGLTANADNSTIVIDPNFPKHTT
                     ITIKNQTAVIAGRVAHFNGVGTACVTFNQVFDGPAPYKVTGAWSVVGTNTNGEKIKSV
                     YTEPVVFWP"
     gene            13913..14614
                     /gene="scpB"
                     /locus_tag="VEV83_17995"
     CDS             13913..14614
                     /gene="scpB"
                     /locus_tag="VEV83_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HYK47077.1"
                     /translation="MELSVIIPHIEALIFASEKPLTALEIVELINNALGFMEERITLD
                     QVESCIEGIHEKYQSEFYPFEVKESGGGWQFLTKKDFHQTIAQLNGDKFLKRLSTAAM
                     ETLAIIAYKQPITKGEIESIRGVNSDYSIQKLLEKELIVITGRSEHLPGKPLVYATSR
                     NFMDYFGINSAEDLPKIKEIIAEQIIQPTLITDNDFKSSETAEEPILSVNSSGDLIAE
                     DTHDTGDASDENKIS"
     gene            14716..15930
                     /gene="lysA"
                     /locus_tag="VEV83_18000"
     CDS             14716..15930
                     /gene="lysA"
                     /locus_tag="VEV83_18000"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HYK47078.1"
                     /translation="MQSSLSREELIDAAKEFGTPLYIYHAEKIKEQLADLNNAFKDCN
                     ARFFYACKALTNLNILKLMHQLGTGIDCVSIYEVKLALKAGFDPSGILYTPNCVDFEE
                     IEAAKKLNVHINIDSISMLERFGNKYGNTYPVCVRLNPHIMAGGNFKISTGHVDSKFG
                     ISIHQVRHIERILKSTGLRVNGLHMHTGSEIKDTNVFIEGLDIMFEMARHFHDIEFID
                     LGSGFKVAYFDDDVKTDVHDLGKKLAQAFLEFEHETGRRLQIWFEPGKFLVSDAGYFV
                     VKVNVIKQTTATVFAGVDSGFNHLIRPMFYEAYHRIENISNPGGAERIYTVVGNICET
                     DTFAWDRKLNEVREGDYLVFYNAGAYGFEMSSNFNSRLKPAEVLINDGKAQLIRKRDV
                     FEDLVRNQIEVI"
     gene            15941..16765
                     /locus_tag="VEV83_18005"
     CDS             15941..16765
                     /locus_tag="VEV83_18005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK47079.1"
                     /translation="MIEIKNIKKTFGDKVILEDISGVMETGKCNLIIGSSGSGKTVLT
                     KCIVGLFKPDQGEILYDGQDFLSMTTEETKILRQQIGMLFQGSALFDSMTVEQNIIFS
                     LDMFSNMTLRDKKKRINEVLSRVELTGANKKYPSEISGGMKKRVGIARAIVLNPKYLF
                     CDEPNSGLDPQTSLVIDKLIKEITLEYNITTVVVTHDMNSVMEIGDYIIYLYNGRKEW
                     EGSNKEIIFSRNKQLNDFIFASEFLKGAKDIRMLEVQGKINENSSLDDIQNVLNNE"
     gene            complement(16878..17537)
                     /gene="rpe"
                     /locus_tag="VEV83_18010"
     CDS             complement(16878..17537)
                     /gene="rpe"
                     /locus_tag="VEV83_18010"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HYK47080.1"
                     /translation="MALVAPSLLACNFLRLEEACKMVNDSEADWFHLDVMDGRFVPNI
                     SFGIPIIEHVRKIATKTCDVHLMIEEPGNLVPAFKKAGADQITVHIEVCPNLHRNIQQ
                     IKELGMLAGVAINPHTPVSSLSDIIADLHQVIIMSVNPGFGGQKFIPHTFEKIRQLRK
                     LIDERGLNVLIEIDGGVTVENAAEIMIAGADVLVAGNTVFSAPDPIAIISQLKRMTQI
                     R"
     gene            complement(17697..18509)
                     /locus_tag="VEV83_18015"
     CDS             complement(17697..18509)
                     /locus_tag="VEV83_18015"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47081.1"
                     /translation="MKLIILLTSICCFIFACHNADVKQKANTDTSKNETAALIEDLQN
                     QVEQYPDSSGLRLRLAIALDSAGMFPDALRQMDSLTNKDSMNYGLWFAKGNIAEDAQD
                     TLLAMRSYAKAAHLYESPQVLLSLANLYAETRNDRAIQICSRVKALGLGRDYDANCAF
                     IVGVYYARTHKPAEAVKYFDECIANNYTYMEAYIEKGLLFFDNKQYEKALEVFQFAAT
                     VNNLYADAYYYQARCYEMMNKKDSAVLRFKQSVQLDPGLKEASERLKQLGAE"
     gene            18602..>19168
                     /locus_tag="VEV83_18020"
     CDS             18602..>19168
                     /locus_tag="VEV83_18020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47082.1"
                     /translation="MTSALAGHNRRVLIIKNITAYLLLLALNSTAVAQTTDSLVYPDE
                     THFRNMRQLTFDGDNAEAYWSYDGSQIIFQRKNEKENIPCDRMFIGRIPQNANDKFVY
                     KPASNGKGRNTCGYFLPGGRQIIFASTYLGGDSCPPVPDRSKYNNRYLWPIYDTYDIF
                     LADTAGNIIKQLTNSPGYDAEGTLSPDGN"
BASE COUNT         5349 a         4301 c         4199 g         5319 t
ORIGIN      
        1 tgcgattcca gcgcgtattg atcggaaggg aaagccttcg cttcgcagat gatcttgaac
       61 cgctctttcg tcggacgata aaaactcacc atcaacaagt gcagatttac ggtgagctgg
      121 ttcatggcaa ccacctcatg ccggaagcaa cccacaatat tgcaaagctg atccgggaaa
      181 atttcgtggt atgaaagcca tggattttta gcattgaaat gtccttccac gccaaggcgc
      241 gcccaatcgt caagctcctg ttggatataa tcttttacgg accgcggttg aaggccaagc
      301 gaattaccag tgaaataaat gcaatccttt ccttgatgtt gtggaataaa aaacttatcg
      361 cgaaaatgtg caagggggtc ttgttcgtcc agtttttgag caaactccaa actgtttatg
      421 tactccattt cctgtttcat ttaaccatga tcatctaacc gtcgatcgtc gcaatcactt
      481 tcaattcgat ggcgatcttg gtgggaagac ttttcacttc aacggtggtt cggcaagcct
      541 gcacatcttt aaaatattca ccgtaaatcg tgttgtatat tgtaaaatcg tctttaatgt
      601 ttgtaagaaa aaccgtcaca tcaattattt tgtcccagcc gcttccacta gcctccagta
      661 ccgccttcac attcgcaaac acagcatggc attcagcttc aatatcataa tgcaaaacgt
      721 tcccttcagc atccaacttg agccctggta ttgaattgtc gacgggatta cgggagccaa
      781 tgcccgaaag aaaaagcagg ttgcctacac gtcttgcgtg cggataagaa ccaagcggcg
      841 tggcagcctt atcagtatta atgatctgcg acatcgaacg atcttcgacg gaaggtaaat
      901 aatctttgca gcgatctcgt aacatctcag gagaatttta cttgcgctgt tacttgtatt
      961 ccttccaact ttttaattga tctgacgttg caggcagtaa gctgatcgct gcgcctccac
     1021 ccggcgccat ttttatgttc accaaggtat tgctattcac caaaaccttt tcaatagtat
     1081 atgcttccgg attgtttttc cagtccgcat catctgcatc acggtaaata gttgcagcgt
     1141 aaatcttgtt tggatcaaga aagtcaagtt taaacgacga ggtcctcgcg ttctcatctg
     1201 ttattaaacc gagaaaccag ttggaagagt tttttgcctt acgcgcgatg gtgatatagt
     1261 cgccgggctc tgcctcaatg atcttagtgt catcccagtc gaccgcaaca tctttgatga
     1321 attggaacgc gtccatatgc gcttcgtaat tttccggaag atctgccgcc atttgcagcg
     1381 gactatacat cgtgatgtac aaagcgagct gttttgtaag cgttgtatgc acctgcctgc
     1441 cgaccactgc tgaataacct tttattttga aaatgccggg cgtgtaatcc atcggtccac
     1501 ccattaatcg cgtgaaaggc atgatcgttt catgctccgg taaattacca tcgctgaagg
     1561 cgttccattc attacctctt cccgcttcgc aggcgagcca gttcggatag gtgcgctgca
     1621 aaccggttgg acgaacaggt tcatgcatgt cgatcatcac atgatattgc gcagccttgt
     1681 ctgccgcacg tacatagtgg tcaatcatcc attgaccgtc atgatgttcc cctcttggaa
     1741 caatgctgcc cacatatcct gtcttcaccg aagtgtagcc gtatttgttc atgaaacgga
     1801 aggctgtatc catttgtctt tcataagtag acgcatctgc actcgtttca ttatgcatga
     1861 tcatgttcac tccgttttgc tttgcgtatt gagcaatggc tttcacatcg aaatctggat
     1921 atggcgttac aaaatcaaac gggccaccat tccagttccc gtaccattct tcccaacccg
     1981 tattccatcc ctcaaccagc aaacctttga tcccattttt tgacgcaaag tcgatataac
     2041 gtttcacatt ttccgtattt gcgctatgcc ggtgatttgg aactagtttc ccatttgcat
     2101 caagcgagtc caggttattc gaataattcc aaccaccttt tcccgtctgc atttcccacc
     2161 atacgccaat gaatttcgtt ggctttatcc atgatgtgtt ttcaattttt gaaggatcat
     2221 tcaaattcag gatgagcttt gaagcaagaa tgtctgttgc tttatcgctc acaatgatcg
     2281 ttctccacgg ggtaacctca ggtgctcgca aatacgcttt atcgcccaac gcatttggaa
     2341 caaggttaca tgataaagtg taactttttc tgtcaacatg cagttgcatt gaggggtaat
     2401 gcaccaacgc tgcttcatga atgttgatgt acaaaccgtc gctcgttttc atcgtcagcg
     2461 gtgtttggac cgcgtactga tccggttcat ttatctcttt cgaattcgtt gagagcaccg
     2521 gcaatttcca accatccact tcgctgagct ttgatgtggt gtatgggtat tcatttgaat
     2581 cgtaatcccc gggtatccag aaagttttat gatcgcccgt taaattgaat tgggtgagtt
     2641 catccgcgat gataaaatat ttcaaatgag gctgaacggg aaattcgtag cgaaacccaa
     2701 caccgtcctg gaatacacga aacacaatat tcaaaaaacg gtttggctcg tttcgttcct
     2761 gcagataaac ttttaattcg ttataatggt ttctgatctg gcttacctca ccccaaacag
     2821 gcttccaggt ttcatcaaat gtttttcttt cactgcgaat aattttaaaa tatctaagcg
     2881 caggattgtt ctttaagtta aaacccagtg cggaaggttt aatgacaaca tggtctttaa
     2941 aataaaccgc gtattcagca atgcccgaat cgccaagtct aaattctaat ttgatattac
     3001 ccaattgttc tgtcagttcg ttgctctgcg catgagaccg aatgatgaac caggacagta
     3061 aaacgatgat ggtaattctt ctcataatgg cgattgcttt gatgctgctt aatcttgaat
     3121 tgaagataac ttgttttgac tatctcctcg aacaggttta tcaacacgag ctaccgcaca
     3181 caaaaatgcc cggttcggcc gggcattaaa cagtttcaaa ttgatgcttt atgcttcgtc
     3241 tcttccatga caattcttat atttctttcc acttccgcag ggacacggat cattccggcc
     3301 gatcttcgga cccaccttaa caggctcctg ttttacaggc gtcggatcat agtagtcatt
     3361 ttcatttgcc gcataatctt gtcccgcggt ttccacttca cgtttattcg catgcatctt
     3421 gctcatgtcg gtcttttgtt gccgcgcttc acgcaccggg gcgttttgtt gaacgggcaa
     3481 ttccgcatga caaaggaaac ttacgatgct gctgttcacc tggctatcca tttgccggaa
     3541 aagattaaaa gcttcgccct tgtaaattac cagtggatct ttctgttcat agtgcgctgt
     3601 ttgtacactt tgcttcagat cgtccatggc gcgaagatgt tctttccacg agtcgtcaat
     3661 cagaaaaagc gttacacttc tttcgagcgt gctcaccaat tctgcgcctg atgattggat
     3721 ggttttgtcg agattcgtta acacctgtat ggctctcctg ccgtcggtga acgggaccat
     3781 aatattttct atatgagcac cctggctttg gcgaatatta tggaagacag gcaaggcaac
     3841 acgcatcagt tccttcctct tgttctgata atttgcaagc gcctcttcat ataagcgtgg
     3901 aactaagttt tcgtgagacg ctttttcaaa ttcctctttt gtgatcgcag tatcaaggcc
     3961 gaggttaacg atggtttcga gtttgaatcc ttcgaagtcg ttacgttctt taaaagtatt
     4021 gacgaggccg tcagcgacat cgtaaaaagc gttatcaatg tcaagcgcaa gtcgttcgcc
     4081 gaacagcgca tggctgcgtt ttgtgtaaac aacggttctc tgtttgttca ttacgtcatc
     4141 gtactccagc aaacgcttgc ggatgccaaa gttgttttct tccactttcc tttgagcacg
     4201 ttctatactt ttcgttacca tgctgtgctg tatcacttca ccctccttat aaccagcaaa
     4261 gtccatcact tttgcgatgc gttcgctgcc gaacatacgc atgagatcat cttccaggca
     4321 aacgaagaac tgagatgatc cgggatcgcc ctggcgtccc gcacggcctc gtaactggcg
     4381 gtctacacgc cggctgtcat gccgttccgt tccgatgatc gcaagtccgc cggcttcttt
     4441 aacgcccgga ccaagtttta tatcagtccc acgacccgcc atgttcgtcg cgatggttat
     4501 attacctgcg agaccggctt ctgcaaccac ctgcgcttca cgggcgtgtt gttttgcgtt
     4561 caagacattg tgcgggattt ttttctgctg caacattcga ctgagcagct cactcacttc
     4621 aaccgacgtt gtaccaacaa gcacaggccg gccgccattt ctcaactgct ctatcatgtc
     4681 gataacgtac ttgtattttt cgcgcttcgt tttataaaca agatcctgtt cgtcttttct
     4741 tacacaagca acattggttg gaattgttac gacgtcgagc ttatagatgt cccaaaactc
     4801 tgctgcctcc gtttctgccg taccggtcat acctgcgagt ttatggtaca tgcggaaata
     4861 attttgaagg gtgacagtcg catacgtttg cgttgcggct tcgatcttca cattttcctt
     4921 tgcctcaatt gcctggtgca aaccgtctga ataacgccgg ccttcgagga tgcggcccgt
     4981 ttgttcatca acgatcttta ccgctccgtc aaggacgaca tactcaacat ctttttcgaa
     5041 taacgtgtat gctttcaata actgttgtac cgtatgaatg cgatccgctt ttactgcata
     5101 gtcattgagg atgatctctt tcttatgcag tttctgttct gtcggcatgt tgggatcatt
     5161 gtcaataaca gctaactcaa cgccgatgtc tggtaatata aaaaagttgg gatcctcacc
     5221 ggcctttgtg ataagttgaa tgcctttatc ggtgagctca acagaattat ttttttcgtc
     5281 gatatagaac caaagttcct catcaacttt tggcatttct ttttgctggt cggagaggta
     5341 ataattttct gacttctgca tttttacgcg aacgcccggc tcactgagaa acttgatgag
     5401 tgcagtattt tttggaagac cgcggtgcgc acggaacaaa gcgagcccgc cacttttcgg
     5461 atcatcgtca ccttcgttga tctttctttt cgcttcgttg agaaactggt taaccgaacg
     5521 tttttgcgct tcaaccaatt gctcaatacg cggcttcaga tcaaaaaatt gctgcgtggt
     5581 attgtctctg ccaacagggc ctgaaatgat caatggtgta cgcgcatcgt caatcaacac
     5641 gctatctact tcatccacca tcgcgtaatg atgtttgcgc tgcaccattt cttcaggggc
     5701 gtgcaccatg ttgtcgcgta aataatcaaa accaaattca ttgtttgtac cgtaggtaat
     5761 gtctgctgcg taagctttgc ggcgatcttc tgaattcggc tgatgtttat cgatgcagtc
     5821 taccgttata ccgagccact cgaacagcgg cccgttccat tcactgtcgc gtcgtgaaag
     5881 ataatcgttc actgttacga tgtgcacacc ttcgccagcc agcgcattga ggtacgcagg
     5941 taaagtggac acaagcgttt taccttcacc ggtggccatt tcggagatct tgccctggtg
     6001 caacacaatt cccccgatca attgcacatc ataatgcacc atgttccagg tgatgagatt
     6061 gcccgccgcc atccaactat tcctgtaaac agaattatcg ccgttaatgg taatgtattc
     6121 ttttttaaca ctgaggtcgc ggtcgagttg tgttgcggtt gatgtaagtt cagtgctctc
     6181 tttaaatctt cgtgcggtct ctttaactac agcgaaagct tccggtaaga tctcaagcag
     6241 tatctcttcg atcttcttgt cgcggtcctt ttttaattca tccgctgctt tatacaatgc
     6301 atcgcgtgcc tgcatttcac tttcgggcaa ttgttcagcc tcggtttttt ttgattggat
     6361 cgattcgtca atttcagcga gatgagcttt tattctttgt ttgaaatcgt tggtcttgtt
     6421 tcttaattca tcattggaaa gagtttgata ctgttcgaag aagtggttta tttgcacaac
     6481 ctgcggttcg atcttcttca cgtccttctc actcttattt ccaccaagaa tcttacttaa
     6541 aatattcagc atatccgtaa tattgggtat ttgtagattt ttttaatttg agaattttat
     6601 gctgtcaaaa actgtgcgcc tgttaaataa agtcaaactg gcagcacatt tcaagccgtg
     6661 caaggtaaca ctttgtaagc actggcatag agcgcccgcg ggctgtacct tataaaaaaa
     6721 agcaaaatga tctctctgga ataaggaaaa ttactgttat gaaaaaacta gctgcattat
     6781 ttattttttc actggcgctg ctgcatgtaa ccggccaaac gactactggg cggctcgaga
     6841 atttaaagga cggatgggac gccacgatcg actatgtagg cgagataaaa aacggcgaac
     6901 cgaatggcgt cgggatcgcg atatattcga atgatttcgc attgcggtat gcaggcaatt
     6961 ttttgaatgg ccagtataac ggtaaaggtg cattgttgtt taaagacgga acttttctga
     7021 gcggggaatg gaagaacgga aaattgaacg gaaagggagc gtatctcagt aaggaaggac
     7081 atctttacgt aggttcattc gtcgacggca aaaaaaccgg caagggtact ttcatatttg
     7141 ccgacaagag cctgttgaca ggcgagatga aaaatgatac gtacgaaggc cgatgcatat
     7201 acattcccgg acaaggcaaa acaattagtg ataatattta cgcagatgga aaaatgaaag
     7261 gctccggtta tcaatatgac attgactcaa aaaatttatc tgaaggcatt tgggatgatg
     7321 ggacgctgac gagcagtggc accgcttctt actacagttt tttaaagagc ccgaattttt
     7381 atgcagacaa atctgatgac cagatattga tgggaggagt agacaagaat aacaacctgc
     7441 ttcaggacac agccttcttt tacaatctaa aagataacag ccggtatttc ggctactgtg
     7501 aaaaaggtta cttgtccgat ggcatcatta tcaaagattc tacagccttc atcggcaaag
     7561 tgaaggatga cggtgcttac ggtgagtgca gtttttacaa aataaaaaag ttttacgatg
     7621 aagggaacta tcaaaaagat tttttaaccg ggcctaacaa cttaagcatc gaccttaata
     7681 agaatacgat ctattacggt gaaacatcgg atcgcggatt gttttcaggg aaggcctggt
     7741 tcgcaaacaa ctataacgaa ttgtatgttg gaaattttca actcggcaag tttacgggta
     7801 gcggctttct tgttttcagt aatggcaaaa ctgttcgcgg aacctttgca aaagggaaca
     7861 cgatcacagt tacatcgctt accgatgaaa acggaaaacc gatcccgcaa aaaccaaaaa
     7921 ccttcatcga tgcgctgact atcattacaa atgagtacgc cgacaactat gaagcattca
     7981 agggtgcaga ggcgaatgaa ggcgattatc cggtcgatga ttattacagt gcctacaaca
     8041 gcatcgtcag ttttcccgga agtgtggatg aaaatgttat cgccgaggat tacgattttt
     8101 atttaagctt ccacgcagcg ctttacaaag gcaaaagctt tgccgccgcg caagctaagt
     8161 acgatgaact ttgcaaagct ctcagcgcag cgtcgctgaa cctaaaaggt agcagtactc
     8221 cggttacatt gtcaggtgat gtggaggagg cgaaagaaaa tgcaacaacc cgaagcaagt
     8281 tcggtcttaa aaattattct tccctgtctg actataacgt ctacgccgaa atcaaatacg
     8341 acaatggcga atacaaggtg agcatcatta cgggggacat cgaactcgat tgattaagct
     8401 tttcatttaa ttaacatacg attgaccgtg caaccgtatt aaatgcaaaa gctgtttatg
     8461 aaattttccc ttcctgcatc tctcttcata tgtttaacta tcggctgcag cagccaccag
     8521 atcggcaata gtaaagatgt aaaccctcaa acgatttttg ttgattatac tgttactggt
     8581 gaagagaatg acgattcggt tacttgttgg gcgcaattca gattcgcggg cgaagacgga
     8641 acgacgcttg tattgaatga acccagcagc atccggcttg atggaacgga gatcgcagtt
     8701 gacagcagcg aagggatggg agcgttttac gagaaaaaat ttaagaccgg gttattcgct
     8761 ggttcgcacg cctggcgata taccgacgga gagatgaaca gttatccttc cacttttgca
     8821 tttactccgt tcagtctggc aagcccatta ccgtccgctg tatcgagaaa agacagttta
     8881 ctgattgagc ttgatggttt acagaatggc actttaatca ccactgcttt atccgacacc
     8941 tcatcgtcaa cagacgatgt aattttcaaa aataaaatta atgatggacg tttcacaatc
     9001 ccgttatcag gttgcaagat gcttagcgcc ggtccggtta cggttcagat ttcaaacacc
     9061 gtcgatacta cgctggcggt tggcgaacgg cctgcagaag gtggccggat cttcgttacc
     9121 tacgccctga aggaaagagt agtcaatctc cgcgacgatt cacgagggtt tgcttccgaa
     9181 taatttttac taataaactg tccaaccacc tcgccgctat tttcgcttcc gttgtattcc
     9241 gttatctttg cgccgctcaa atacaggttt ttcgtttact attttaagat caaaatcata
     9301 aaatggccgg ccagttaaaa gaagttcgca atcgtatcaa atcggttcaa agtacacagc
     9361 agatcacaaa ggcgatgaaa atggtaagcg ccgcgaagct tcgccgcgcg caggaagcca
     9421 ttttacaaat gcggccttac gcgcggaaat tgcaggaaat gcttagcaac atcgtaagca
     9481 acattgaagg aggcacgagt ttgaagcttg cggaagaaag agctattgaa agagttctat
     9541 ttatcctggt caccagcgac cgtggcctct gcgggggtta caacgcaaac ctggccaaac
     9601 tcgcaagaca ggcgattgcc gacaaataca gcagccagct aaaaaaggga aatgttgtta
     9661 tttggaacat cggtaagaaa ggttgggaaa gtatgacacg tacaggctat aaaaccaatg
     9721 atgcatataa agacattttt ttgaacctta cgtttgaaaa tgtacaggca gtttcgcagg
     9781 cagcaatgaa ggcattcgag agccgcgaat ttgatgccgt tgaacttgtt tatagtgaat
     9841 tcaaaaatgc ggcaacgcag cgttttgttg tagagcaatt tttgccgatc ccaaaggtgc
     9901 agaaaaaaga cggagccaaa aaagccgatt ttattttcga acctgacaag gaagcgctga
     9961 tagcggagct catgccgaaa atattgaaca cgcagttgta caaggccgta cttgatgcga
    10021 atgccagtga gcatggcgcg cggatgaccg caatggataa ggcaagcgag aatgcaaatg
    10081 aattgctgaa ggtattgcgc gtaagttata accgcgcacg ccaggctgcc atcactactg
    10141 agctcacgga gatcgtgagc ggcgcagcag cattggaagg ataaagatta gcgggatttt
    10201 cttttaatcc ttttttttag cgcgcccgca aagcgatgtg attaagctgt ttttcaaatt
    10261 acataaattg atttgccgga gagtcgcatc acaggtgtaa ttgatgaaga ttgaaaaatt
    10321 ttcgatcccc attcgctaaa ctctttctgt agtccgtcct ctacaattct gtcttcaact
    10381 tccacgtaat caggcaacat cggaaacgat atatctctgc ccgatcaaat aatattttcc
    10441 gagagagata gcatgcgacc atggcgccgg cttgggcaga tggcagagta tttgcgcagc
    10501 ggtagtttaa tttttatttt cctaaaacta aaaaacaaac tatgaaaaca cgagcgtttg
    10561 gcgctaacct gttacccttg cttgcattaa tgatgctttt tgccacagta acgatcgttg
    10621 catgtcgaaa gacagaaacg accgctgcac gaacaaacag cgaatccggt acccagtcaa
    10681 tcaattccac gaattttgct tacgtcaatt ctgacctgga tgacaaagat tttgacgacg
    10741 cgttcagcga cagcggcgac tgcaaaacgg tgacctttga cacgtcaaaa gatgtgtatc
    10801 cccacacgaa gaccatcact tacaataact gtttcagtga gtgcaaggat ggtgttctga
    10861 acggcacaaa ggtggtttac aattatgtga atccggattc tgctcatgct ggcgatttga
    10921 taaaagaagt cacttaccag gattttacca tcgacagcgt gaaagtttcg ggggatgtaa
    10981 aagtttattt ggtttcgaat gatccttaca ccttgcatgt tgtggcaacg agaacgttgg
    11041 tcatctcggg taaggacgga gttaccgaga cagtaaagac agatcatatc cgcacgctaa
    11101 cttccggtgg caataccgag gacaggagcg atgatgtgta ttctgtaacc ggaacttcaa
    11161 gcgggcatga aattctgcac ggtggccagg ttgcaaaata ttcagtgatg atcgatccta
    11221 acgaccccgt aataaaggca gctgattgtt gttggagatc ctcaggcaca gagacggtaa
    11281 ccattgattt gaattccaga ggaactaagt caacgctgac tgaagtgcta gactacggag
    11341 atggcacctg cgataaccag gctacattga gcataaatgg tggcgaagcg caaacggtta
    11401 cgcttcccct gagattttgg ccgctcaatc cttaattcaa aaaaaaattt gaggctgttg
    11461 aaataaacag cctccttttt ttgatgatgt acgtatatag atgatacaag catcgctgga
    11521 attgaaacag aggagcgatc tacacttttc agcagcttag aaaatgaggc cggatcgtac
    11581 tcaggtattt aaatattagt ttatattcgc attcgcttta ccccccacat aaatcgttgt
    11641 agctaggcct tttattaatt aaaccttctt tctaaaactt aaaaactaca aaatcatgaa
    11701 gagacaactt ttccgtgtga atttagtgcc gctcgctgca cttcttatca tgggtgtaat
    11761 cgtaacgatg ttcgcttgtc aaaagacaga aagcaacagg tcgcaaccaa cgtcagacct
    11821 gaacactcaa tttctgaaca acacaaattt cgccgtcaac gacgaaaatt tagacgacca
    11881 ggactttgag gatgccgttg ctttggacga ggacgcaccc ctcgacaatt ttaacggatc
    11941 cggcggcggc ggctgcaaga ccatcactta cgatccgtct agagatgttt acccgcacac
    12001 gaagacaata gtgtataaca attgcacgag tgagtgtaaa ggaggtacca taaacggcac
    12061 gaaggtgatt actgtttatg tgaacccgaa acttgccaag ccaggcgacc tggtaaaaga
    12121 aatcgtatat cagaatttca ctgtagacga tgtgcagatc actaatgata caaagaccta
    12181 cctggcctcc aatgatccgc tcacatggca tgttgttcgt acaagaacgt acgtaattgg
    12241 tggcaaagat ggaattactc aaacttctag cagcgacctg atgcgcgaat tgatcgctgg
    12301 tggtgacacc caggacaaca gcgatgatat gtatgctgtc acgggcacaa caacaggagt
    12361 cgaaaacgaa catggtggcg ggttacacgg taaatacaca agtgtaatag atgaaactga
    12421 tcctgcaacc gcgggcgcta attgctgctg gagaacatcg ggaactgaaa ccataaacat
    12481 tgaagtacga gaaaaaggtt ctacaacctc actcactgaa gttttggatt atggcgacgg
    12541 cacctgcgac aaccaggcta cgctttcaat aaatggaggc gaggcgcaag cagttacgct
    12601 tcctttgtac ttctggcctt taagtcaata agataatatc gcaagttctt tagggggctg
    12661 ccttggttgg cccccttttt ttaccttccg ttccgaaccg tgaaaatttc gagtctgtaa
    12721 aaaaatgata ggaatcattt ggtttattta aacattcgtt tatattcgca tttactttca
    12781 ggactttaca tcaggctaac tgaataaaaa ccttatgtga acgctacatt cgccatcccg
    12841 gcagcgagaa agtgtcaaaa gttagaatat ccgtatagaa accgcaacca attcaatttc
    12901 cgttttaaaa ccagaattaa ttatctcatc atttaaatca aaaaaacatg cgtatccggt
    12961 atcttttatc gctcctcgtt ctggttgcgg cgtttaatgc ttgccagaag gaaatcaaac
    13021 aaacggctgc taccagctca gcaatctcga acacggaagt tgctccgtac gacaatcttg
    13081 tctttagtca aaatccagca ttcgtaggac aaagtgtaaa catttcgggc agtctgcaaa
    13141 ataatactgc tcctgactgt ggcacgttgc gcattgaaca ggctgtggat ggcgatggca
    13201 atccaacgtc aacggctttg gcggtcaatt gggtatcagt tgccgacgta actcctggca
    13261 cacatgcaac ggtctctttg gactgggttc ctactgcaac gggttatttc ggatttcgtc
    13321 ttcattttat tccgaacgaa tcctgcaatg gtgaagctta caatggtgta cctgctccgg
    13381 gtatggacct gcaggttatc gaaagctgtt ccggcctttc agtagccgtg acacaagcta
    13441 gcgcaacgct gataagtggt aacctttatt cagttcatgt gtgcttcact gtaaatacct
    13501 gcggagagaa gtacacggat gtcaagctcc agggtggatt aactgctaat gctgacaata
    13561 gcaccatagt cattgatccg aacttcccga aacacactac tattacgatc aagaatcaaa
    13621 cggctgtgat cgccggtaga gtggctcatt tcaatggcgt cggtactgct tgcgttacct
    13681 tcaaccaggt atttgatggg cctgctcctt ataaagtaac cggagcgtgg tctgttgttg
    13741 gaactaatac aaacggagaa aaaatcaaat ccgtatacac agaacctgtt gtgttctggc
    13801 cataagctag tttgaagaac gaacaaaaac ggggctccaa tctggcggcc ctgttttttt
    13861 tatccgtact ccatatcttt gaccgaatta attgttatct taaatctata tattggaatt
    13921 aagcgtcatt ataccgcata tcgaagccct catctttgcc agcgaaaaac cactcactgc
    13981 tctggaaatt gtagaactta taaataatgc gctcggcttc atggaggaac gcattaccct
    14041 tgaccaggtg gaaagttgta ttgaagggat tcatgaaaaa tatcaatcgg agttctatcc
    14101 atttgaagtg aaggaaagcg gcggcggctg gcagtttctt acaaaaaagg attttcatca
    14161 aacgattgcg caactgaatg gagacaaatt tctcaaacgc ctgtccaccg cggcgatgga
    14221 aacacttgcg atcatcgctt acaagcaacc gattacaaaa ggtgagatcg aaagcatccg
    14281 cggggtcaac agcgattaca gcatccagaa acttttggaa aaagagctga ttgttatcac
    14341 cggtcgaagc gagcatctgc ccggcaagcc attggtgtat gcaacttcgc gaaacttcat
    14401 ggactatttt ggcatcaact ctgccgaaga tctgccgaaa ataaaagaga taattgccga
    14461 acagatcatt cagccaacgc tcattaccga taatgatttt aaaagttcag aaaccgctga
    14521 ggagccgata ctgtctgtaa acagcagtgg tgaccttatc gcagaagata ctcatgatac
    14581 cggcgacgct tctgatgaaa ataaaatttc atagcagcca tcttatcttc tcattcaccc
    14641 gaaaaacttt cctgcagcta actaattaag gcaactataa cctccgtgcg tattttcgca
    14701 caacaaacgt agttcatgca gtcatcactc agccgggaag aacttatcga tgcggcaaaa
    14761 gaattcggca caccacttta tatctaccat gcggagaaaa tcaaagagca gttagctgat
    14821 ctcaacaatg catttaaaga ttgcaacgca aggttttttt atgcttgcaa agcactaact
    14881 aatctgaaca tcctgaaatt gatgcaccaa ctgggaaccg gcattgattg cgtaagtatt
    14941 tatgaagtga aactggcatt gaaagcgggt tttgatccct ccggaatttt gtacacgccg
    15001 aattgtgtag actttgaaga gattgaagca gcaaaaaaat taaatgttca tataaacatc
    15061 gacagcatct ccatgctgga acgtttcggc aacaaatatg gaaatacgta ccctgtgtgc
    15121 gtacggctaa atccgcatat catggccggc gggaacttta agatctcaac gggtcatgtg
    15181 gacagcaaat ttggcatttc gatccaccag gtgcggcata ttgagcgaat attgaaatca
    15241 acaggcctgc gggtgaacgg cctgcatatg cacaccggaa gcgagataaa ggataccaat
    15301 gtatttatcg aagggcttga tattatgttt gaaatggcac gtcattttca cgatattgag
    15361 tttatagatt tgggcagtgg ctttaaagtt gcctattttg atgacgacgt aaagactgac
    15421 gttcatgacc tcggtaagaa actcgcgcag gcattcctgg aatttgagca tgaaacgggg
    15481 cgaagattgc agatatggtt cgaaccagga aaatttttag tgagtgacgc cggctatttt
    15541 gtcgtgaaag taaatgtgat caaacaaacg acagcgactg tttttgccgg cgttgacagc
    15601 gggtttaatc atttgatcag gccgatgttt tatgaagcct atcaccgcat cgaaaacatc
    15661 agcaatccgg gcggtgccga acggatctac acagtggtcg gcaacatttg tgaaacagac
    15721 acttttgcat gggaccgaaa actaaatgaa gtgcgcgaag gcgactacct ggttttttat
    15781 aacgcgggtg catacggctt tgaaatgtcg agcaacttca attcacgttt aaaacctgcg
    15841 gaagtactaa taaatgacgg taaggcgcaa ttgataagaa aaagagacgt gtttgaagac
    15901 ctggtacgaa atcaaatcga agtaatatag atgtagactt atgatcgaaa taaaaaacat
    15961 aaaaaagacc tttggagaca aagttattct cgaagatatc agtggtgtaa tggagaccgg
    16021 taaatgtaat ttgatcatag gctccagcgg aagcggtaaa accgtgctca cgaaatgcat
    16081 agttggttta ttcaagcccg atcagggtga gatcttatac gacggacaag actttttgag
    16141 catgacaacc gaagagacaa aaattctgcg tcaacagatc ggcatgctgt tccagggttc
    16201 tgcgctcttt gattccatga ccgtggagca aaacataatt ttttcgctcg acatgttttc
    16261 aaacatgact ctgcgggata aaaagaaaag aataaatgaa gtgctttcaa gggttgaact
    16321 taccggcgca aacaagaaat acccttcgga aataagcggt ggaatgaaaa agcgtgtagg
    16381 tattgcaaga gcgatagtgt tgaaccctaa atatcttttt tgcgacgagc ccaacagcgg
    16441 cctcgatccg caaacatcgc tcgtgataga caagctgatc aaagagatca ccctggaata
    16501 taatattacg acagtcgtgg ttacacatga tatgaatagc gtgatggaaa tcggggatta
    16561 catcatctat ttatataatg gaagaaaaga atgggaaggc agtaacaaag agatcatctt
    16621 ctccaggaac aagcaactga atgattttat tttcgcttcc gaatttttaa agggtgccaa
    16681 ggacatacgc atgctggaag tgcagggaaa gatcaatgaa aacagcagcc tggacgacat
    16741 tcaaaatgtt ttgaacaacg aatgaaggtt gtgaatggtg aatagtcaat ggtgaatcga
    16801 tcttgaaaca tggatcaggg atcagacatc acagatcgga gatcatagat cagacatcag
    16861 agatcccaca tcgcccatca ccttatctgc gtcatccttt tcaactggct gataatcgct
    16921 attggatcag gcgcgctgaa cacggtattt cctgctacca aaacatcagc gcctgcaatc
    16981 atgatctcag cggcgttttc aaccgtgaca ccgccatcga tctcgatcaa aacattcagt
    17041 ccccgctcgt cgatcaactt tcgaagttgc ctgatctttt caaacgtgtg aggaataaat
    17101 ttttgtccgc caaacccggg atttacgctc attatgatca cctggtgaag gtcagcgatg
    17161 atatctgata aggacgaaac gggtgtatgc ggattgatgg caacgcccgc aagcatccca
    17221 agctctttta tttgctgaat attcctgtgc aggttgggac acacttcgat gtgtacagtg
    17281 atttggtcag cacctgcttt tttaaatgcc gggaccaggt tacccggctc ttctatcatc
    17341 aggtgaacgt cgcaggtctt cgttgcgatt tttcttacat gctcgatgat aggaattcca
    17401 aagctgatat tcggaacaaa ccgtccatcc atcacgtcta aatgaaacca gtcagcttca
    17461 ctatcattca ccattttaca tgcctcttct aatcttaaaa aattacatgc caataaagac
    17521 ggggcaacca atgccataaa ttttggtttg ttattactgt tgagcgtgaa gatagggaaa
    17581 tgtaaagccc tcttccccta aaggggagaa attttaccag ccaacctcga gctgatttcc
    17641 tcaatcctga agcatgaagc aaatcctaat tcctaattcc aaataccaga tgcatgtcat
    17701 tccgctccta actgttttaa acgttcactt gcttccttca atcccggatc tagttgtact
    17761 gattgtttaa atcttaacac agcgctgtct ttcttgttca tcatttcgta gcatcgcgcc
    17821 tggtaataat acgcatctgc atataaatta tttactgtag ctgcaaattg aaaaacctcc
    17881 agtgcctttt catattgttt attgtcaaag aacaacaacc ctttttcaat gtaagcttcc
    17941 atgtacgtat agttgttggc aatacactcg tcaaagtatt taactgcctc cgccggttta
    18001 tgggtgcgag cataatacac acctacaatg aaagcacagt ttgcgtcgta gtctcttccc
    18061 aggccaagcg cttttactct tgagcatatt tggatcgcgc ggtcatttct tgtctcggca
    18121 tacaggtttg ccagcgataa cagcacttgt ggcgactcgt atagatgcgc tgcttttgca
    18181 taacttctca tcgccaataa agtatcttgt gcatcctcag cgatgtttcc tttcgcaaac
    18241 cataaaccat aattcatact atccttgttt gtgagcgaat ccatttgccg gagcgcgtcg
    18301 ggaaacattc cagcactgtc taatgcaatc gcaagacgga gcctgaggcc actgctgtca
    18361 ggatattgct ccacctggtt ttgcagatct tcaattaacg cagccgtttc atttttcgac
    18421 gtgtctgtgt tcgccttctg tttaacatct gcattgtggc acgcaaatat gaaacagcaa
    18481 attgaggtca aaagaataat taatttcatc cggcgcaaat gtagctttca aactttttat
    18541 cccaaatctt tttaaaacgt gcgatttatg tttgcggtta tttttacaaa aaaattagaa
    18601 gatgacttca gcactggcag gacacaatcg tcgcgtcttg atcataaaaa atataactgc
    18661 ttacctcctt ctgcttgcac ttaattcaac cgcagtcgcg caaacaaccg atagcctggt
    18721 atacccggat gaaacacatt tcaggaatat gcgccagttg acgttcgatg gcgacaatgc
    18781 agaagcctat tggagttatg acgggagcca aatcatcttc cagcgcaaga atgaaaaaga
    18841 aaatattccc tgcgacagaa tgttcatagg gcgtattccg caaaatgcta acgataagtt
    18901 tgtgtacaaa ccggcgagca atggaaaagg cagaaatacc tgcggatatt ttttacctgg
    18961 tggaagacag atcatttttg cttctaccta tttaggaggt gatagttgtc cacccgtgcc
    19021 cgataggagc aaatacaaca atcgctacct ctggccgatc tacgacacgt acgatatttt
    19081 tttggccgac acagcaggta atatcatcaa acaacttaca aacagtccgg gttacgacgc
    19141 cgaaggaacg ttatcacccg atggcaac
//
LOCUS       DASQJI010000664         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1624555,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000664 DASQJI010000000
VERSION     DASQJI010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624555"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VEV83_18025"
     CDS             complement(<1..1123)
                     /locus_tag="VEV83_18025"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HYK47083.1"
                     /translation="MIKLKWMALLMCLVYSAAHAQIKLPRLISDSMILQRDANIKIWG
                     WASVEEKITVNFDDHSYHTITGKDGKWLITLAPMKAGGPYNMQIVGSNSITIKNILIG
                     DVWICSGQSNMELPMERLKDKYPDVIAAASNPNIRQFNVSTHYDFKSPQDDLPSGTWE
                     TATPSSVLHFTAVGYFFAKRLFEKYHVPIGLIKTAVGGSPAEAWLSEEALKEFPDYLQ
                     TVEKLRSDKYVDSIKRSDSAATAAWYNNIWQNDNGLHEEKKWFDTSYDAASWQAMNVP
                     AYWQDAGLRNTHGAVWFRREFDVPRSMTGQPARLFLGNVVDRDSVYINGIFIGATQYQ
                     YPPRKYAIPSGLLHEGKNIIVVRVINYSGAGGFYKDKPYR"
     gene            1223..>1555
                     /locus_tag="VEV83_18030"
     CDS             1223..>1555
                     /locus_tag="VEV83_18030"
                     /inference="COORDINATES: protein motif:HMM:NF015604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA];
                     GO_process: GO:0045493 - xylan catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /protein_id="HYK47084.1"
                     /translation="MKKYFLLLIYCFTLTFLRAEDGYRLWLRYDKIDDDELLQEYRSW
                     ISSIHFTNSSATLDAAKAELLNGLSGLLAKNITEQELIENGSIVAGPAGDPTIHALIQ
                     ANIFHKIGK"
BASE COUNT          399 a          379 c          313 g          464 t
ORIGIN      
        1 aacgatacgg cttgtcttta taaaaaccgc ctgcacccga ataattgatc acgcgcacaa
       61 caatgatgtt ttttccttcg tgcaaaagcc cggatggaat cgcatatttt cttggcggat
      121 actgatattg cgtggcgccg ataaaaattc cattgatgta aacggaatct ctgtcaacta
      181 cattacccaa aaaaagtcgc gcaggttggc ctgtcatcga tcgcggcaca tcaaattccc
      241 tacgaaacca tacagctcca tgtgtatttc ttagacccgc gtcttgccaa taagccggta
      301 cgttcatcgc ttgccacgaa gcggcatcat aactcgtatc aaaccatttt ttttcttcat
      361 gcaggccgtt gtcgttttgc cagatgttgt tgtaccacgc tgcggttgcg gcgctgtcgg
      421 agcgttttat actgtcaaca tatttatcgc ttcttagttt ttcaaccgtt tgcaaataat
      481 ctggaaactc ttttagcgct tcttcgctta accatgcttc ggcaggggag ccgcccactg
      541 ctgtttttat caacccgatc ggcacatgat atttttcaaa taatcttttg gcaaaaaaat
      601 atccaacggc tgtaaaatga agaacactcg acggcgttgc ggtttcccag gttcccgacg
      661 gcaggtcgtc ctgcggtgat ttaaaatcat aatgtgtaga aacattgaac tgcctgatgt
      721 tcgggttact tgctgctgcg atcacatcgg gatatttatc ctttaatctt tccatcggca
      781 actccatatt cgactgacca gaacaaatcc aaacatctcc gatcaaaata ttttttatcg
      841 tgatgctgtt actgccgacg atctgcatat tgtaaggtcc gccggctttc attggtgcga
      901 gcgtgatcag ccatttgccg tcttttcccg tgatcgtgtg ataactgtga tcatcgaagt
      961 ttacggtgat cttttcttcg acagatgccc aaccccaaat ttttatgttc gcatctcttt
     1021 gcaggatcat gctgtcgctg atcagccgcg gcaattttat ttgcgcatga gctgctgaat
     1081 acaccaggca catcagcaat gccatccatt tcaacttgat caaaattttg taacgaatat
     1141 aatttagaaa gtgcctctcg tccgcaaaat aattctatag ttttgcaact acccggtaaa
     1201 cagtcgctac tcgttccgca gtatgaaaaa atattttctc ctgcttattt attgctttac
     1261 gctgactttt cttcgcgcag aagacgggta tcgtttatgg ctgcggtacg acaaaataga
     1321 tgatgatgaa ctgttacagg agtatcgaag ttggatctcc tccattcatt ttaccaattc
     1381 ttctgcaaca cttgacgccg cgaaagcaga actcctgaat ggcttgagtg gattgctcgc
     1441 caaaaatatc accgaacaag agttaattga aaacggttcc atcgttgcgg ggcccgccgg
     1501 cgatccaact attcacgcac ttatccaagc aaacattttt cacaagatcg gcaag
//
LOCUS       DASQJI010000665         5290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_244268,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000665 DASQJI010000000
VERSION     DASQJI010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5290
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244268"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VEV83_18035"
     CDS             complement(<1..563)
                     /locus_tag="VEV83_18035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4197 domain-containing protein"
                     /protein_id="HYK47085.1"
                     /translation="MIRNFFFFLFLPVMLSTPVHHIPNVTVALHPVKQPPQVVEGLKE
                     ALTIGTQNATKQLSAVDGFFANAAIKVLMPPEANNVEKTLRQIGMGSLVDKTILSLNR
                     AAEDATKSATPIFVDAIKQMTINDAVGILGGGDSAATVYFKQKTTPALTAAFSPVIKQ
                     SLDKVDATKYWSQTFSVYNKFSTKRVNT"
     gene            758..1840
                     /locus_tag="VEV83_18040"
     CDS             758..1840
                     /locus_tag="VEV83_18040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47086.1"
                     /translation="MSFSDIWKKITEAPSYRPARINIPADHTDIGSRLQMRFVKNETY
                     FVVRINELFLSYSRKWFSTYDPVVFVTTEFIYNAEKFAVPFVVGPTLMSNKMDRLPEG
                     MIFQDTAVAGLHPYRGGNFILSIVLGRIRQENYLRKFIGLVEKAAATYTGGFATVVSS
                     YAKVANVVLDGMETLFNNDDVDPLIGCRKEFMQQALDEFTSGYFLLMNTEEKNIDESR
                     FFVKDNKLFYGDSLQDAKPFRDADYVLYSIIAAPRRDDIELLPFHTQFQQLQSYISDI
                     PTTISKEQGDIINAKRYKLQDTVRMSADLVRPQVKEVISDYDAELKEMIDERHALSGE
                     ESVAADKRDDWEKEMDAQAWNILYKK"
     gene            1843..3261
                     /locus_tag="VEV83_18045"
     CDS             1843..3261
                     /locus_tag="VEV83_18045"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HYK47087.1"
                     /translation="MADEQQQLIRIRFSRDQLTVTKISDAKPKPFERKEGLVKLELTV
                     AQIFHKVLNKARVVDIFKKDDYKVLGETLYKILMQDPEVKKFFLPEFKSIYRDKQMRC
                     RISLEFDSDTYKLAALPWEYLRIDENKEDNVPSFFIAADTNRQYDIMRTIDDGLQGEL
                     IDHKNQKEISVIAVSINTSDRFGIEKIDEYRSMLSRLYRKFSIENSSDSKFNYIPIED
                     PYFRNLSQVLEEQVQNITGPYVLHFFGHAKMEDDKAFIGFINDSNTIDWIESQRFAGI
                     FSPANRMNLSRNPALVVLQACESGQVNDEGKGLAAELARQGIPAVVGMQNEISEATSL
                     SFVSKFYEDLVNGYDVAEAVTRGRYFLGCEYNKKEQDEYYNSNSFGTPVLFISTNFPI
                     QLMPKQETVRTDTTKTRKKCQKCGKIVPSTSDETHRLNNCGGKLIPWSETDAVADQSS
                     RRSVNADLAAVANITSSAVRDN"
     gene            3272..>5290
                     /locus_tag="VEV83_18050"
     CDS             3272..>5290
                     /locus_tag="VEV83_18050"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47088.1"
                     /translation="MNLPDIQLRKILSGIYADACLHEAVNMREFVNRFEGIREQVQAK
                     PGTRCWNSIKLDKEFFSNALHLDYLLRLQRIYYDELINSIVERIKGQIPEQPELAWQT
                     FVTEYADALVNWCSIVYNKLCDHNFDFDEQKRERIEEFKKLNRYVLLEKWVNALPLFD
                     RLTKETALSKYQLSCLHVTVGQIILYWMADMEGCIAYFEKAKELSPDNSKAVRCMGEY
                     YLRKQQYEKARAIFLNSTSVDPNDTENYTYIADSYKDERKLETAEQWYKDAININLLA
                     TASIGSLMQLYGQPEWYDEKKHLIDPLLLQAEAIERNLDTENTLYNRYRDAGHAHFAA
                     SNFEEARKYYEKAQALRPDLVAAKLDLAYTCSYLKDFGQAEKWLDASLDPADETMNFD
                     TYWAYALLYEQMNTSAPSENYRNKSIDYYERSMALRPELNDVIYNAIGLLYADAADYA
                     KAIPFYVKAIEIKPQQVYVDNFKETLSKLTDVSVADVNTNDDFILNETGNFIYGKGEF
                     EKAKQCYLRAIAQKETPVYFENLGLANEKLLLPEEAEAAYKRSIELDTETGNSFNRLG
                     VFYYNQMQDDKAILFYKKALEREPGNVTYLQNLAYAYESSLQYDAAKNVYDRMLATDP
                     VNDNVYYRLAVIAMNDKKYDEAINPITEALKIQPQNIAYLKAAGTAHEN"
BASE COUNT         1625 a         1087 c         1238 g         1340 t
ORIGIN      
        1 gtgtttaccc gtttggtaga aaacttatta tagaccgaaa atgtttggct ccagtatttt
       61 gtcgcatcca ctttatcaag tgattgcttg atcaccgggc taaacgctgc ggtaagtgcc
      121 ggagttgttt tctgtttgaa ataaaccgtg gcagcagaat cgcctccgcc caagattcca
      181 accgcatcgt tgatggtcat ttgttttatc gcatcgacaa agatcggcgt tgcagatttt
      241 gtggcgtctt cggctgcacg attgagcgag aggatcgttt tatccaccag gctgcccatg
      301 ccgatctgcc ggagtgtttt ttctacattg ttcgcctcgg gaggcatcaa taccttgatg
      361 gcagcgtttg cgaaaaaacc atcgacagca cttaattgtt tcgtcgcatt ttgcgttccg
      421 atggtgagcg cttccttcaa tccttctaca acctgcggcg gttgtttaac aggatgaagg
      481 gcgacagtaa cattcgggat atgatgaacc ggagtggaaa gcattacagg gagaaagaga
      541 aagaaaaaga aatttctgat catgttttgt ttttaaagaa cgtcaattct gaaacgaatt
      601 aaattaaaat ttttttatac ggccgccgca ggcaaataaa ataatttatt gccggcagta
      661 tcacaaatat tgtttaaaat atatagagcg catttcgccg atttttttgc gtgcatttta
      721 catttatgta aattgtcgtt cgaacaaaac acctcctatg agtttttcag acatctggaa
      781 aaaaatcacc gaagctcctt cttaccgccc tgcgcgtata aacatccccg ctgatcatac
      841 agacatcggc agcaggcttc aaatgcggtt cgtaaaaaat gaaacttatt tcgttgtccg
      901 catcaatgaa ctgttcctct catacagtcg caaatggttt tccacgtacg atcccgtggt
      961 gtttgtcacc accgagttca tctataatgc agagaagttc gctgtacctt tcgtggtggg
     1021 accaacgctg atgagcaaca aaatggaccg gttgcccgag ggcatgatat tccaggatac
     1081 cgccgtggcg ggtctccatc cctaccgggg cggtaatttt attctgagca ttgtattagg
     1141 acgtattcgg caggaaaatt atctgagaaa atttattggg cttgttgaaa aggctgccgc
     1201 cacatacacg ggcggtttcg caacggtggt gtcgagttat gcaaaagtgg caaacgtggt
     1261 gctcgatggt atggagactt tgttcaacaa tgacgatgtt gatcccctta ttggctgccg
     1321 taaagaattt atgcagcagg cattagatga attcacttca ggatattttc tcctgatgaa
     1381 tactgaagaa aaaaatattg atgaaagcag gttctttgtg aaggataata aactttttta
     1441 cggggattcg ttgcaggatg ctaagccgtt ccgcgacgcg gattacgttt tatacagcat
     1501 tatcgcagcg ccccgacgcg acgacatcga actgcttccg tttcatacac agttccagca
     1561 actgcaatct tatatcagcg acataccaac cacgataagt aaagaacagg gagacatcat
     1621 caatgcaaaa agatataaac tgcaggatac tgtgcggatg agtgcagatc tcgtgcggcc
     1681 gcaggtaaaa gaagtgatca gcgattacga tgccgaactc aaagagatga tcgacgaacg
     1741 tcatgcattg agcggcgaag aaagcgttgc tgccgacaag agagatgact gggaaaaaga
     1801 aatggatgca caggcatgga acattcttta taaaaaatag ttatggccga tgaacaacaa
     1861 caactgatcc ggatacgctt ttccagggat cagctaaccg ttacgaaaat ttccgatgca
     1921 aaaccaaagc cgttcgagcg aaaagaagga ctcgtaaaat tagagctgac ggtcgcgcag
     1981 atctttcata aagtattaaa caaggcacgg gtagtcgata ttttcaaaaa ggatgattat
     2041 aaagtgcttg gtgaaacgct ttacaagatc ctgatgcagg acccggaagt gaaaaaattt
     2101 tttctgccgg aatttaaaag catttaccgc gacaaacaaa tgcgctgccg gatctcgctt
     2161 gagttcgaca gcgacacgta taagctcgca gcattaccat gggaatacct gcgcatcgat
     2221 gagaacaaag aagacaatgt gccgtccttt tttattgcag ccgataccaa caggcaatac
     2281 gacattatga gaaccattga tgacggtttg cagggcgagt tgatcgatca caaaaatcaa
     2341 aaagaaataa gtgttattgc agtttctata aatacctcag accggttcgg cattgaaaag
     2401 atagatgaat atcgatccat gctgagccgt ctttacagga aatttagtat tgaaaattct
     2461 tccgattcaa aattcaatta tataccaatt gaagatccgt atttcaggaa tttatcacaa
     2521 gtcctggagg agcaggttca aaacataacg ggtccttacg tacttcattt ttttggacac
     2581 gcaaaaatgg aggacgataa agcattcatc gggtttatta atgacagcaa cacgatcgat
     2641 tggatagaga gtcagcgttt cgcaggtatt ttcagtcctg caaatcgaat gaatctttcg
     2701 cgcaacccgg cgctggtggt actacaggca tgcgaaagcg ggcaggttaa tgacgaaggg
     2761 aaaggccttg ctgccgagct ggcgcggcag ggaattcctg cggtagtagg catgcaaaat
     2821 gaaatttcgg aagcaacgtc gctaagtttt gtttcaaagt tttatgaaga cctcgtaaat
     2881 gggtacgacg ttgcggaggc cgtgacacga ggaaggtatt ttctcggctg cgagtataac
     2941 aaaaaggagc aggatgaata ttacaacagt aattcgttcg gcacacctgt actttttatc
     3001 tctacaaatt ttccgataca gcttatgcca aaacaggaaa ctgtgcgtac ggatacaacg
     3061 aagacgagaa agaaatgtca gaaatgcggc aagatcgtgc caagcaccag cgatgaaacg
     3121 catcgtctga acaactgcgg aggaaaatta ataccctggt cagaaaccga cgctgtggct
     3181 gatcaatctt cacgaaggtc agtaaacgcg gatcttgctg cggtcgcaaa tattaccagt
     3241 tccgcagtcc gcgacaacta ataaaagcga tatgaacttg cccgacatac aattgagaaa
     3301 aatactttcc gggatctacg cagatgcgtg tttacatgag gccgtcaaca tgcgcgagtt
     3361 tgtgaatcgc tttgaaggaa tacgcgaaca ggtgcaggca aaacccggaa cgaggtgctg
     3421 gaactctatc aaacttgaca aagaattttt cagtaatgct ttacatcttg attacctgct
     3481 aagacttcag cgaatatatt atgacgaatt gatcaattca atcgttgagc gcatcaaagg
     3541 acaaataccc gaacagccgg agctggcatg gcaaaccttc gtaacggagt atgctgatgc
     3601 attagtgaat tggtgtagta tagtatataa caaactctgt gatcacaatt ttgattttga
     3661 cgaacaaaaa cgagaacgaa tagaagaatt caaaaaatta aatcgatacg tgttgttgga
     3721 aaagtgggta aatgcgctgc ccttgttcga tagattgaca aaagaaacag ctttgagtaa
     3781 atatcaattg agttgtttac atgtcaccgt tggccagatc attttgtact ggatggctga
     3841 tatggaagga tgcattgctt attttgagaa agcaaaggaa ctctcccctg acaacagtaa
     3901 agcggtgcgc tgcatgggcg aatattacct gcgcaaacag caatatgaaa aagcgcgcgc
     3961 catatttctg aacagtactt ccgtcgatcc caatgacaca gaaaattata cttacatagc
     4021 cgacagctac aaggatgaaa gaaagctgga gaccgcagaa caatggtata aggatgcgat
     4081 caacatcaac ttgctggcga ctgcaagcat tggaagcctg atgcaactgt atggccagcc
     4141 ggaatggtat gatgaaaaga aacatttaat agatcctctc ttgctgcaag cggaggcaat
     4201 agagagaaac ctcgatacgg aaaataccct gtataaccgc tatcgcgatg ctggacatgc
     4261 gcattttgct gcatccaatt ttgaagaagc acgcaaatat tatgagaaag cgcaggcgtt
     4321 gcgtcctgac ctggtcgctg caaaactcga cctcgcctat acatgcagct atttgaaaga
     4381 ttttggccag gctgaaaaat ggcttgatgc ttctttagat cccgcagatg aaacaatgaa
     4441 ttttgatacg tattgggcct acgctctttt atacgagcag atgaatacgt ccgcgccttc
     4501 cgaaaactac agaaacaaat ccatcgatta ttatgagcgc tctatggctt tgcgcccgga
     4561 actgaatgac gttatttaca atgcgatcgg gttgctgtat gccgacgcgg ccgactatgc
     4621 caaagcgatc ccgttttatg tgaaggcgat cgaaataaaa ccgcagcagg tatacgtgga
     4681 caatttcaag gaaacgctgt cgaagttgac tgacgtttcg gtcgctgatg tgaacacaaa
     4741 cgatgatttt attttgaacg aaacgggaaa tttcatttac ggaaagggag aatttgaaaa
     4801 agcaaaacaa tgttatttgc gggcaattgc gcaaaaagaa acgccggttt atttcgaaaa
     4861 cctgggcctc gccaatgaaa agcttttact gccggaagaa gccgaagctg catataaaag
     4921 atcgatcgag ctcgatacgg agaccggcaa ttcatttaac aggctgggtg tattttatta
     4981 taaccaaatg caggatgaca aggctattct gttttataaa aaggcactgg aacgcgaacc
     5041 gggtaatgtt acgtatctcc aaaaccttgc gtatgcgtat gagagcagcc ttcaatacga
     5101 tgcagcgaaa aatgtctacg atcgaatgct cgctactgat cccgtgaatg ataacgtata
     5161 ttacaggctc gcggtgatcg cgatgaatga taaaaaatat gacgaggcta ttaatcctat
     5221 cacagaggcg ttaaaaatcc agccacaaaa tatcgcctac ctgaaggcag caggaactgc
     5281 tcatgaaaat
//
LOCUS       DASQJI010000666         3937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1316372,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000666 DASQJI010000000
VERSION     DASQJI010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316372"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            724..2397
                     /locus_tag="VEV83_18055"
     CDS             724..2397
                     /locus_tag="VEV83_18055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614194.1"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015370 - solute:sodium symporter activity
                     [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/solute symporter"
                     /protein_id="HYK47089.1"
                     /translation="MNNRLVYSDYLVFVIYFIIVASYGYWIYLKRKTREHDSKAFFLA
                     EGSLTWWAIGASLIASNISAEQFIGMSGNGYFVGIAVSAYEWIAALALIVIAVWFMPI
                     YLKNHIYTMPQFLKTRYNETVALIMAIFWLFLYVFVNLTSILYLGAIAINGLLPGQSY
                     LHAVMIGLAIFAIIITLGGMKVIGYTDVIQVSVLIIGGLATAYMALNKVSGGNGPLAG
                     FNMLIKEAPDHFHMILAKPDQSSPQQYIDKYLILPGILMYAGGQWITNLNYWGCNQYI
                     TQRALGASLPTARNGLLFASLLKLLMPVIVMLPGIAAYVLIKQGQLQPLGRMDDAYAS
                     VLNFLPNGLKGLSIAALTAAIVASLAGKANSISTIFTLDIYKKYIRTDATEARLVWTG
                     RFVVLCAMVMAIAFTWEDLLGIGGTGGFTYIQKYTGFISPGVFAMFFLGMFWKRTTGL
                     AAVVGLLTGVSLCIFFNEFAPQVFGNETFLYTAYPNGKGGYEIPFLIAMGISFALTVI
                     VMVAISLAGPKVSPKAFILDKTMFKLRPSNIALIVVVLLILFALYVKFW"
     gene            2472..3656
                     /gene="hutI"
                     /locus_tag="VEV83_18060"
     CDS             2472..3656
                     /gene="hutI"
                     /locus_tag="VEV83_18060"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HYK47090.1"
                     /translation="MRGNELSQLPCVENSYLLVENEFIAGYGKMDEIDNVLNMEPDMP
                     RLSVDGACVLPCWCDSHTHIVFAASREDEFRDKIKGLSYAEIAGKGGGILNSAAKLRN
                     LTEDELFDLAFERLNEVIRLGTGAIEIKSGYGLTLESEMKMLRVIERLKKTANIPVKA
                     TFLGAHAYPAEYKNDHEKYINILINEMLPNIAKENLAEYIDVFCEQGFFSAEEMTRVC
                     EAGIKYGLKPKLHVNQISSIGGIEAAIGVNALSVDHLETMSDEEIENLANSETIATML
                     PTAAYFLRMPFPAARKMIDAGCAVALASDYNPGSSPSGNMNVVVSMSCIQMKMLPEEA
                     INAATINGAYAMELEAEVGSIAIGKKANLIFSKKIPSLTYLPYAFGANLIDKMMINGE
                     FL"
BASE COUNT         1058 a          854 c          934 g         1091 t
ORIGIN      
        1 gaaggacact aaagccttgc ttttctcgcc acgcgcgcta agtaacaaag gactaacgtt
       61 tgaagtatct cgttacaaaa aacttcctga ccgcaagcgt gtaccttact cgaatgtcga
      121 aaacctaaag aaccccgaac acagaatatt ttctttgtgg cctttgcgcc tttgcgggag
      181 ccaaactgtg tggttttttg agcagtgtat tcttcacccg gccacaaagg agctttgtgt
      241 tttcccacaa aggccacgga gaccacaaag gaaatatgtg tttttcccac aaaggacgca
      301 gatgccgcaa aaggcggcct taaatttctt gcagggatcc taagtgaaaa agggagtcaa
      361 cattaagata tctgatgact caaaacgtct ttggctgcaa gcgttcaccc gtttgttaat
      421 ttcagaaacc aagcaacacg aaaattgcag aaaaattttc tttgtggcct ttgcgcgagc
      481 caaacgatgt gctctgttag gcaattgcca cggccccttt tcatttctaa atgtgcagtt
      541 ttcataaagc agcgagcaaa ctctttgttc gccggcccgc tttgtgacaa accaaactct
      601 tcactcggga gataccacaa attatccggc caaatattaa atctaatttc agaataaact
      661 atatttcggc ttcgtgggaa cttcctaaat catctgtcta ttccaaacct ctaacgaaca
      721 attatgaaca accgtctcgt atacagcgac tacctggtat tcgtgatcta tttcatcatc
      781 gttgcatctt atggttactg gatatatctc aaaagaaaga cccgcgaaca cgattcaaaa
      841 gcattcttcc tcgccgaagg ttctcttacc tggtgggcaa taggagcatc tttgatcgct
      901 tcaaatattt cagcggaaca atttatcggc atgagcggca acgggtattt tgtgggtatt
      961 gccgtttccg cttatgaatg gatcgcggcg ctggccctga tcgtcatcgc cgtatggttc
     1021 atgccgatct atctgaagaa tcacatatat acaatgcccc aatttcttaa gactcgttat
     1081 aatgagaccg tggcattgat catggcgatc ttttggttat tcctctatgt atttgttaac
     1141 cttacttcga tcttgtattt gggagccatt gcaataaatg gtttactgcc cggacaaagt
     1201 tatttgcatg ctgtaatgat aggccttgcc atctttgcga tcatcatcac actcggtgga
     1261 atgaaggtca tcggttacac tgatgtgatt caggtgagcg ttttgatcat tggtggtctt
     1321 gctacagcgt acatggccct gaataaagtg agcggtggta acgggccact cgcagggttt
     1381 aacatgctga tcaaagaagc accggatcat tttcacatga tacttgcaaa gcccgatcaa
     1441 tcatctccgc agcaatatat cgacaagtac ctgatcctgc cgggcatttt aatgtatgcc
     1501 ggcgggcagt ggataaccaa tctcaactac tggggatgca accaatacat cacgcagcgt
     1561 gcgttgggtg cgagcctgcc tactgcgcgc aatggtttat tgttcgcaag tttgttaaaa
     1621 ctattgatgc ccgtcattgt gatgttgccg gggatcgctg catacgtctt aataaaacag
     1681 gggcaattgc aacctctcgg cagaatggat gatgcctacg cctccgttct taactttttg
     1741 ccgaatggat tgaaagggtt gtcgatcgct gcgttaactg cagccatcgt ggcctcactg
     1801 gctggcaaag caaacagtat ctccacgatc tttacccttg acatctataa aaaatatatc
     1861 aggacagatg caacagaagc caggttggtg tggaccggca ggtttgtggt tttgtgtgcg
     1921 atggtcatgg ccattgcatt tacatgggaa gacctgttgg gcatcggcgg caccggtgga
     1981 ttcacataca ttcaaaaata tacgggcttc ataagcccgg gagtttttgc catgttcttt
     2041 ctcggtatgt tttggaaacg aacaaccggg ttggcggcgg tagtcggttt gcttaccggt
     2101 gtgtctctct gtattttttt taatgaattc gcgccgcagg tttttggcaa cgaaacattt
     2161 ctatatacag cctatccaaa tggtaaaggc ggctatgaaa ttcccttcct catcgcgatg
     2221 ggaatttctt ttgcgcttac tgtaattgtg atggtcgcca tcagccttgc agggccgaaa
     2281 gtttctccga aagcattcat acttgacaag acaatgttta aactgcggcc gtctaatatt
     2341 gcgctcatag ttgtcgtgct gctgatcctg tttgccctct atgtaaaatt ctggtagaag
     2401 tatatttcat gcagaagcga ctgataacaa acatcagatg tctcgttaat gtaagagaac
     2461 aaaatcgact cttgcggggc aatgaactat cgcagctgcc gtgtgtggaa aattcgtacc
     2521 tgctggttga aaatgaattt attgccggct atggaaagat ggacgaaatc gacaacgttc
     2581 tcaacatgga accggatatg ccccggctaa gcgtcgatgg cgcctgcgta ttaccgtgtt
     2641 ggtgcgattc acatacccac attgtttttg cggccagtcg ggaggatgaa ttccgggata
     2701 agataaaagg attgagttat gcagagatcg ctggaaaagg cggcggcatt ttgaattcag
     2761 cggcaaagtt gaggaacttg accgaagatg agctttttga tctcgcattt gagaggttga
     2821 atgaagtgat ccggttgggg acaggcgcga tcgaaataaa gagcggttac ggtctgacgc
     2881 ttgaaagcga aatgaaaatg cttcgggtta ttgagcgatt aaaaaagaca gcaaacattc
     2941 ctgttaaagc aactttcctc ggagcacatg cctacccggc tgagtataaa aacgatcatg
     3001 aaaaatatat aaacatcctc atcaacgaaa tgcttccgaa catcgccaaa gaaaatttgg
     3061 cagagtatat cgatgtgttt tgtgagcaag gctttttttc tgctgaagaa atgacgcgtg
     3121 tttgtgaagc gggaatcaaa tacggcctaa aacccaaact gcacgtgaat caaatcagca
     3181 gtatcggcgg cattgaagct gcaatcggcg tgaatgcgtt gtcggttgat catctcgaga
     3241 caatgagtga cgaggaaatt gaaaaccttg cgaacagcga aacgatcgcg acgatgcttc
     3301 cgaccgctgc ttatttttta cgcatgcctt ttccagccgc gaggaaaatg atcgacgcgg
     3361 gctgcgcggt tgctcttgcg tccgattaca atccgggttc atcgccgagt ggtaatatga
     3421 atgtggttgt ctcaatgagt tgtatacaga tgaaaatgtt gcccgaggaa gcgatcaatg
     3481 cggcgacgat caatggcgca tatgcgatgg agttagaggc tgaggtcggg agtattgcaa
     3541 ttggcaaaaa ggcaaatctc attttctcaa aaaaaatccc ttctctcaca tatttgccct
     3601 atgcgtttgg tgcgaatttg attgataaga tgatgatcaa tggcgagttt ctgtaaccct
     3661 gaagggttca atttaaatag ccgcagcttt tgggtgcggg gttcaagcga tccagtaata
     3721 ccgagccccg aatggggttc aattaaattt tatctttcgg tattccacga tgtgttgaaa
     3781 tcaagtagcg acatcacaat caacaggaat tgcaagcata catatcactt cagcaaattt
     3841 ttgatctcat tcaacttcat caatgcctcg acgggcgtaa gccgattaat gtcgatatgg
     3901 tctaagagct cgcgtatcgt gccgaacgtt tgtgaat
//
LOCUS       DASQJI010000667         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2854191,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000667 DASQJI010000000
VERSION     DASQJI010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2854191"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..>1691)
                     /locus_tag="VEV83_18065"
     CDS             complement(19..>1691)
                     /locus_tag="VEV83_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HYK47091.1"
                     /translation="YNELTIQFINGFTIIFRAYNDGVAYRIATSFKDSITIVNELAEF
                     NFADGAHAFTPIIQKRADQDVFHTSFEELYPYRSLDTVSANEYMYSPVLVRTSNGFKV
                     AVTESDLDDYPGMFLKGSSAFTLHSAFAGYPLEERIAEGDYPERIVRKRAAYIAKTNG
                     TRNFPWRVLIIARNDKELPANDLVFRLASPSKINDVSWIHPGKCTDEWIIDINLFNVP
                     FRSGVNTASYKYYIDFAKRFGFDRIMMDAGWSDTKDLFKINPNINMDSISNYAKEKGI
                     KLSMWTLSMTLDKQLDSALKQFQKWGVDFIMTDFIDRDDQKTVNFYKRITEACAKAHL
                     MIMFHGAYPPKGFNRTYPNNITREGVLGSEYNGWSDKPTSRHNLVIPFTRMLAGPLDY
                     EPGLLDNATAQQFKPIWGKVMSQTTRCQQLAMFVVYDNPLQIFSGNPSQGYLEPEFME
                     LLGSLPTTWDTTIILEATVGDNIVTARRKGHDWYIAGMCAGEPKDFDLDLSFLEEGNY
                     AASICSDGVNADRNAMDYVIKNSTIHKNETVHLHLAPNGGFLMRLRKE"
BASE COUNT          440 a          382 c          382 g          487 t
ORIGIN      
        1 ccgcaatctc caatctgctc attctttcct cagcctcatt aagaaccctc cattcggtgc
       61 aaggtgtaga tgaacggttt cgtttttatg tatggtactg ttcttaatga catagtccat
      121 cgcattgcgg tcggcgttaa ctccatctga gcaaatacta gccgcataat ttccttcttc
      181 gagaaaagaa aggtccaaat caaaatcttt cggctcgcct gcgcacatgc cggcgatata
      241 ccaatcatgg cctttgcgac gcgcagtgac aatattgtcg ccaacagttg cttcgagtat
      301 aatagtggtg tcccatgtgg ttggcaagga acccagtagt tccataaatt caggttccag
      361 gtaaccttgc gacggatttc cggaaaaaat ttgcaaggga ttatcataca caacaaacat
      421 cgcgagctgc tggcatcgtg ttgtttgact catcactttt ccccaaatag gtttgaattg
      481 ttgcgcagtt gcattgtcga gtaagccggg ttcataatcc aacgggccag cgagcatgcg
      541 cgtaaaaggg atgacgaggt tatgtcttga cgttggctta tcactccagc cattgtactc
      601 gcttccaagc acaccttcac gcgtaatgtt gtttggatac gtgcggttaa aaccttttgg
      661 cgggtaagcg ccatgaaaca tgatcattaa atgcgccttt gcacaagcct ctgtaatgcg
      721 cttataaaaa ttcaccgttt tctgatcgtc ccggtctata aaatcggtca ttataaaatc
      781 gacgccccat ttctgaaatt gttttagcgc gctgtcgagt tgtttatcaa gcgtcatcga
      841 caaagtccac atacttaatt tgatcccttt ctctttcgca taatttgaaa tagaatccat
      901 gttgatgttt ggatttattt tgaaaaggtc tttcgtatcg ctccagccag catccatcat
      961 gatgcggtcg aagccgaagc gtttcgcgaa gtcgatgtag tatttgtatg acgctgtgtt
     1021 tacgccggat ctgaaaggca cattgaacag gttaatgtcg atgatccatt cgtccgtgca
     1081 tttgccggga tgaatccacg acacatcatt gatcttcgac ggcgaagcaa gacggaacac
     1141 gagatcattt gcaggcagtt ctttatcatt gcgtgcgatg atcaaaacgc gccacggaaa
     1201 gtttctcgta ccgtttgttt tggcgatgta tgctgcacgt ttccttacga tgcgttccgg
     1261 gtagtcgcct tctgcaattc gttcctccaa tggatagccg gcaaatgcgg agtggagggt
     1321 gaatgccgac gagcctttca agaacatacc cggataatcg tccaggtcag attcagtaac
     1381 ggcgacctta aagccgttgg aggtgcgtac aagaaccggc gaatacatat attcatttgc
     1441 ggaaacggta tccagcgatc tatacggata taattcttca aagcttgtat gaaatacgtc
     1501 ctggtctgct cttttctgaa tgataggagt gaaggcatgc gcaccatcgg cgaaattaaa
     1561 ttcagctaat tcattcacta tcgtgatgga atctttgaaa gacgtagcga tcctgtatgc
     1621 aacgccgtca ttatacgcgc gaaaaataat tgtgaagccg tttataaatt gaatggttaa
     1681 ttcattataa a
//
LOCUS       DASQJI010000668         8513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_549967,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000668 DASQJI010000000
VERSION     DASQJI010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8513
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549967"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1064)
                     /locus_tag="VEV83_18070"
     CDS             complement(<1..1064)
                     /locus_tag="VEV83_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 domain-containing protein"
                     /protein_id="HYK47092.1"
                     /translation="MLNKKTTPRKPLAMLAIVCLCGLLMSSSHREAPLIANDPLADNT
                     DLYVFKNPNAKDKMVIIANYIPAELPYGGPNYYTFGENVRYEIHIDNNISTPADDIIY
                     RFTFRSVDEDSTTFFDIRLGKENHKTSYTVERSMNGGASFETILTSGKVPPPNIGARS
                     IGGPVGLNLPYYAAEWTSDVATASTGEEIFCGPADDPFFVDLGGIFDLGDAPRQSGMY
                     RDGLGHYNIHSICLNVPVEILQKDHKRVEAATNILDPNYIIGVWASASRQKMRVLNGV
                     SYSESGDWVQVSRLGMPLTNEAVVPVGYKDLWNSMTPYEDLADIGTFGNFFYNPELAL
                     YMDDAKFGGAVPAFSPLRIQ"
     gene            1263..1664
                     /locus_tag="VEV83_18075"
     CDS             1263..1664
                     /locus_tag="VEV83_18075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HYK47093.1"
                     /translation="MNAFSFLLDVNASGTSADYAPIGIQLLFAAGFVATIMIVTHLIG
                     PRRKTAEKLENFTSGIESHGDARQPFAIKYFLVAILFVLFDVEVIFFYPYAVNFKSLG
                     WTGFIEVVLFVAFFLAGFIYIIKKGALHWED"
     gene            1746..2336
                     /locus_tag="VEV83_18080"
     CDS             1746..2336
                     /locus_tag="VEV83_18080"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HYK47094.1"
                     /translation="MARPVRFNIHPKKTEIYDNIALAEMPEGLQGEGYFATSFEKIVG
                     LARKNSIWPLPFATSCCGIEFMATMGAHYDLARFGSERLGFTPRQCDLLMVMGTIAKK
                     MGPVLKQVYLQMAEPRWVLAMGACAASGGIFDTYSVLQGIDQIIPVDVYIPGCPPRPE
                     AVIDGVMRIQELVNNESLRRRNSDHYKALLNSYGIQ"
     gene            2412..3005
                     /locus_tag="VEV83_18085"
     CDS             2412..3005
                     /locus_tag="VEV83_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HYK47095.1"
                     /translation="MALTNERIKERLIEKFGEQVFNFEEPYGMLTFEAPKDMNLKLMQ
                     FLFDDDELKFRFLTTLCAVHYPDQKGRELAIVYHLHNLTDNIRIRFKIYTDIDQPDIF
                     TATKLFEAANWLERETYDFYGVNFVGHPNLKRILNVDEMDYFPMRKEYPLEDQTRKDK
                     DDEMFGRGGTLGYGTVKTEDDHTIAESEKNNVGDKLV"
     gene            3055..4296
                     /locus_tag="VEV83_18090"
     CDS             3055..4296
                     /locus_tag="VEV83_18090"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HYK47096.1"
                     /translation="MPDLVQAQEKHIKLPDGSIEKQTTTLNLGPTHPATHGVFQNILE
                     MDGERVVSAEQTIGYIHRAFEKIAERRPLYQITPLTDRMNYCSSPLNNMGWHLTCEKL
                     LKVKTPKRVDYLRIIIMELARISDHLICNSVVAVDAGAFTGFLYVMQYRELIYEIYES
                     VCGSRLTTNIGRIGGFERNFPNVAFEKLEKFLDEYPAVLKEFENLLMRNRIFMERTIG
                     AGPINAERALNYGFTGPNLRAAGVDYDVRIHTPYSSYEDFDFTIPVGSTGDCYDRFLV
                     REQEMWQSLNIIKQAYRKVQEFKGAEAEVFHADVPEYYLPPKEDVYTKMEALIWHFKI
                     IMGEIEMPAGEVYQSVEAGNGELGFYLISDGGRTPYRLHFRRPCFIYYQAYSELIKGA
                     MLADAIIVMSSLNLIAGEMDS"
     gene            4296..4520
                     /locus_tag="VEV83_18095"
     CDS             4296..4520
                     /locus_tag="VEV83_18095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47097.1"
                     /translation="MEKERKIKEGKVSFDEGEDADIEYWANLPVTERMRQAFDWNKQV
                     WKHILKERYTEDIQLIGEKRSKSFTDEDDF"
     gene            4562..5062
                     /locus_tag="VEV83_18100"
     CDS             4562..5062
                     /locus_tag="VEV83_18100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HYK47098.1"
                     /translation="MIRFSENKLREVQDIISHYPDGKQKSALLPILHIAQDEFGGWLD
                     VPVMDYVAELLQLQPIEVYEVATFYSMYNLKPVGKYMFEVCETGPCMLNGSDNIIAYI
                     EKTLSIKPGETTADGMFSLKTVECLGACGYAPMMQFGKTYREHLTKEKIDAIIADCRS
                     KAVLNN"
     gene            5150..5554
                     /locus_tag="VEV83_18105"
     CDS             5150..5554
                     /locus_tag="VEV83_18105"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47099.1"
                     /translation="MKLNPYLHFSGNAEEVLNFYRDIFDGEIIRLSRYADGPMPVDDD
                     WKSKIMHVSLKFGDCLIMISDGPKGYKSSTEGNIQLSVDFDDADKMERTFNKLAGGGT
                     IVLPLAKQFWGARFGMLKDKYGIGWMFNHEEK"
     gene            5561..6007
                     /locus_tag="VEV83_18110"
     CDS             5561..6007
                     /locus_tag="VEV83_18110"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK47100.1"
                     /translation="MNRQTLFIVFLLLPLAFTVKAQNAAGKNDVMMKMQSLRNALLAK
                     DSVTLSSLLADDVTYIHSSGFVQTKSQLIKDVMSGFQDYKSIEPSDMNIRMYDNASVV
                     TVKLKTSVIFGGKPTDLNLLVTLTWIKMSGDWKLVARESVKLPDLQ"
     gene            6026..7375
                     /gene="nuoF"
                     /locus_tag="VEV83_18115"
     CDS             6026..7375
                     /gene="nuoF"
                     /locus_tag="VEV83_18115"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HYK47101.1"
                     /translation="MKKILLEKDHVEGIRYYEAYRREGGYKSVEKAFKMSPNDIVEEV
                     KKSGLRGRGGAGFPTGMKWSFLAKPEGVPRYLVCNADESEPGTFKDRYLMEFLPHLLI
                     EGLIVSSYALGSGRTYIYIRGEYAWIVDILEQAITEAKNNGWLGKNILGTGFDCEIYI
                     HRGAGAYICGEETALLESLEGKRGNPRIKPPFPAVRGVWDCPTVVNNVETLAAIVPII
                     NMGGDEYAKIGVGKSTGTKLISACGNINKPGVYEIDMTISVEEFIYSDEYCGGIPNGK
                     RLKACIPGGSSVPILPANLLLKTAKGETRYMNYESLADGGFATGSMMGSGGFIVFDED
                     QCVVRHTYTLARFYRHESCGQCSPCREGTGWMEKILKNIEYGKGKMSDIDLLWDIQSK
                     IEGNTICPLGDAAAWPVAAAIRHFRDEFEWHVLNPDECVKRNYGLAHYAEPLELATV"
     gene            7418..>8513
                     /locus_tag="VEV83_18120"
     CDS             7418..>8513
                     /locus_tag="VEV83_18120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HYK47102.1"
                     /translation="MAEQPLFKVTIDNITIQVPAGTTVLNAARQIGGDVAPPAMCYYS
                     KLQNSGGKCRTCLVEVSRGSDKDPRPMPKLVASCKTAVMDGMEVKNITSQKVTDARAG
                     IVEMLLINHPLDCPICDQAGECDLQDLSYEHGREGTRYEFDRRTFEKHTLGPNIQLHM
                     TRCILCYRCVFAADQLTNTRQHGILDRGDHSEIATYIEKSLDNDFIGNIIDVCPVGAL
                     TDRTFRFKNRVWFTKPVDAHRDCPKCCGEVRLWMRGDEVFRVTARKDEWGEVRDSTKG
                     TPGWICNECRFEKKDTKDWMIEGPTKVNRHSVIASNKYVGVTKPPEFLEDIMHGTHPR
                     YMLDIHNVSEVNAAEVRLDLIEGPAHTEDFE"
BASE COUNT         2463 a         1656 c         2138 g         2256 t
ORIGIN      
        1 ttttgaatac gcaaaggact gaacgcagga actgcgcctc cgaactttgc gtcgtccata
       61 taaagagcca gctcgggatt gtaaaagaaa tttccaaatg tgccgatatc cgccaggtct
      121 tcatacggcg tcattgaatt ccacaggtct ttgtaaccca ctggtacgac agcttcgttg
      181 gttagcggca tcccgagtct cgaaacttgc acccaatccc cgctttctga atatgacact
      241 ccgttcagta cgcgcatctt ctgcctgctg gctgaagccc aaacaccaat gatataattc
      301 ggatcgagta tgtttgtggc agcctcaact cttttatggt ctttctgtaa aatttcaaca
      361 ggaacgttga ggcagatgga atgaatatta taatgtccta agccatcgcg gtacataccg
      421 gattgtcttg gtgcatcacc taaatcaaaa atgccgccga ggtcaacgaa aaatggatca
      481 tccgccgggc cgcaaaagat ctcttcgccc gtgctcgcag tggcaacatc agaagtccat
      541 tctgcagcgt aatagggcag gttaagaccc acgggcccgc caatgcttct tgccccgata
      601 ttaggtggtg gtactttgcc actggtaaga attgtttcga agcttgcacc accgttcatg
      661 ctcctctcaa ctgtgtagct tgtcttatga ttttcttttc ccagccggat atcaaaaaat
      721 gtggttgaat cctcatctac gctccgaaat gtgaagcggt aaatgatgtc atcagctggt
      781 gtgctgatgt tgttgtcgat gtgaatttcg tagcgtacgt tttctccaaa tgtgtagtag
      841 tttggtcctc cataaggaag ttcagcggga atataattcg cgatgatgac cattttgtct
      901 ttagcatttg gatttttgaa aacgtagaga tcggtgttat ccgccagcgg gtcattggct
      961 atcaatggcg cttccctgtg cgaggaagac atcaacagac cgcaaaggca aacgatagcc
     1021 agcatggcca gcggttttcg cggtgtagtt tttttgttta gcatgattgt tttttgtgaa
     1081 gtgattaaag aaatggctgc ttgtctttag caaacaatta tcagctacga gaaaaagatt
     1141 tgaatggttt ttggtttttc agatttgtgc acggcgctgc gcgttttttc aataggttaa
     1201 acatgaaagt ctgtttgttg tttttatttt ttgccccgta cttttgctcg taaatcatcc
     1261 ccatgaatgc attttctttt ttgcttgatg taaatgcttc gggaacttcc gcggattatg
     1321 cgccgatcgg catccagttg ctttttgccg ccggttttgt cgcaacgatc atgatcgtga
     1381 cccatctcat cggtccaaga agaaagacag cggaaaagct ggagaatttt acaagcggaa
     1441 tagaaagtca cggcgatgca agacaaccgt tcgccattaa atattttttg gtagcgatat
     1501 tatttgtgtt gttcgacgtg gaggtcatct tcttttatcc atacgctgta aatttcaaat
     1561 cgcttggatg gaccggcttt attgaagtgg tgctttttgt ggcctttttt ttggcggggt
     1621 tcatatacat catcaaaaag ggagcattac attgggagga ttaatacttt taaaatttgc
     1681 gattatgaaa acgctggtac cggcattttc aaatctccaa attttcaaat tttcaaattg
     1741 aaaaaatggc acgaccagtt cgctttaaca tacacccgaa aaaaacagag atatacgata
     1801 atattgccct ggctgaaatg ccggaaggat tgcagggcga aggatacttt gcaacgagct
     1861 tcgaaaagat cgtgggcctc gcgagaaaaa attcaatttg gccgctgccg tttgctacat
     1921 catgctgcgg tatcgagttc atggcgacta tgggagcaca ttacgacctc gcccgttttg
     1981 gttccgagcg tttaggtttt accccgcgcc agtgtgatct tttgatggtt atgggcacga
     2041 tcgcaaaaaa aatgggccct gtgcttaaac aagtgtactt gcagatggcc gaaccccgct
     2101 gggttttagc gatgggtgca tgcgcagctt cgggaggaat attcgatacc tattcggtgt
     2161 tgcaagggat agaccagatc attccggttg acgtttatat acccggctgt ccgccacgcc
     2221 cggaagcagt gatcgatggt gtaatgagga tacaggaact ggtgaataat gagagtttac
     2281 gacgcaggaa cagtgaccat tataaagcgc ttttgaacag ttatggaata cagtaatgag
     2341 ttaatttgaa aatttgagaa tgtggtaatg gcatttttca aactttcaaa ttttacaatt
     2401 ttcaaattga catggctctg actaacgaac gaattaaaga acggcttata gaaaaatttg
     2461 gtgagcaagt tttcaatttt gaggaacctt acgggatgct cactttcgag gcgccgaagg
     2521 acatgaattt gaaactgatg cagttcttgt ttgatgacga cgagttgaaa tttcgttttc
     2581 ttacaacgtt gtgcgctgtg cattacccgg atcaaaaagg aagggagctc gccattgtct
     2641 atcacctgca caacttaaca gacaacataa ggatccggtt taaaatttac actgatattg
     2701 atcaacccga tatttttaca gcaaccaaat tattcgaagc tgccaactgg cttgagagag
     2761 agacttacga tttttacgga gtgaacttcg ttggccatcc gaacctgaag agaattttga
     2821 atgtggatga gatggattat tttccaatgc gcaaagaata tcctttagaa gatcagacaa
     2881 gaaaagataa ggatgatgaa atgtttggca ggggaggaac gctgggatac ggaaccgtga
     2941 aaacagagga cgaccatacc attgccgaat cggaaaaaaa taatgttgga gacaaattgg
     3001 tttaattaat cgtcaccggt cgacaaattt tcgtcgaacc gttaaacgga tcaaatgcca
     3061 gatttagttc aagcacaaga gaaacatatt aagttacctg acggctcgat cgagaagcag
     3121 accactacat tgaatctcgg gccaacacat ccggccacgc atggtgtgtt tcaaaatatt
     3181 ttggagatgg atggcgaaag ggttgtttct gcagaacaaa ccattggcta tatacaccgg
     3241 gcttttgaaa agatcgcaga acggcgcccg ctttaccaga tcactcctct taccgaccgg
     3301 atgaattatt gcagcagccc gcttaataat atgggttggc acctcacatg cgaaaaactt
     3361 ttgaaagtaa aaacgccaaa gcgcgtcgat tatctccgta taataataat ggagctcgcg
     3421 cgaatttcag atcacctgat ctgcaattca gtggtggctg tggacgccgg tgcatttacc
     3481 ggctttttgt atgtaatgca atatcgtgaa ctgatctacg agatctacga atctgtgtgt
     3541 ggttcacggc tgacgacaaa tattggacgg attggtggtt ttgaaagaaa ttttccaaac
     3601 gttgcctttg agaaacttga aaagtttttg gacgaatatc ctgcagtttt aaaggaattt
     3661 gaaaacctgc tgatgcgcaa tcgcattttt atggaacgta cgatcggcgc cggaccgatc
     3721 aatgctgagc gcgcattgaa ctatggattc accgggccta acctgcgcgc agcaggagtg
     3781 gactacgatg tgaggatcca cactccttac agtagctatg aagattttga ttttaccatt
     3841 ccggttggtt caaccggcga ttgctatgac aggttcctcg tacgcgaaca ggaaatgtgg
     3901 cagtcgctca atatcatcaa acaggcttat cgcaaagtgc aggaatttaa aggtgccgaa
     3961 gctgaagttt ttcacgccga cgttcctgaa tattacttgc cgccgaagga ggatgtgtat
     4021 acaaaaatgg aggcgctcat ctggcatttc aagatcatca tgggtgaaat tgagatgccc
     4081 gccggtgaag tttatcaaag cgtcgaggcg ggtaatggag agttgggttt ctacctgata
     4141 agcgatggag gaaggacccc atatcgttta catttcagga ggccctgctt catttattac
     4201 caggcatatt cggaattaat aaaaggtgca atgctggccg acgcgatcat tgtaatgagc
     4261 agcctgaatt taattgccgg cgaaatggat agctaatgga aaaagaaagg aagataaaag
     4321 aaggcaaagt gtcctttgat gaaggtgaag atgccgatat tgagtattgg gcgaacttgc
     4381 cggttactga aagaatgcga caagcttttg attggaacaa gcaagtttgg aagcatattt
     4441 taaaggaacg gtataccgaa gacattcaac tgatcggcga aaaaaggagc aaaagtttta
     4501 ccgacgaaga tgatttttaa taaggactca gaaaaattat tgcgaagaaa aagaaagact
     4561 gatgatccga ttttcagaaa ataaattaag agaagtacag gacatcatca gccattaccc
     4621 tgacggtaaa cagaagagcg cgctgttgcc aattctgcac attgcacagg acgaatttgg
     4681 tggctggctc gatgtccctg tgatggatta tgtcgctgaa ctgttgcagc tgcagccgat
     4741 cgaagtgtat gaggtcgcaa cattctatag catgtataac ctgaagccag ttggaaaata
     4801 tatgtttgaa gtttgtgaaa caggcccttg catgctgaat ggaagtgaca acattatcgc
     4861 ttatatagaa aaaacactca gcatcaaacc gggagaaacg acggccgatg gaatgttcag
     4921 cctgaaaact gttgaatgtc ttggtgcctg cggctatgcg ccgatgatgc aattcggaaa
     4981 gacgtatcgt gaacatttaa ccaaagaaaa aatagacgcg ataattgcag actgcaggag
     5041 taaagcagtg ttgaacaatt gaaacatggc aattcgatcg aaacatatag acgtcataac
     5101 ggcattgcaa cgagacgctc atttgtaaat tcgtttcaac acaatcaata tgaaattaaa
     5161 tccatactta catttttcgg gaaacgcgga agaagtgctg aatttttacc gcgacatatt
     5221 cgacggcgaa attatccgcc tcagccggta tgcagatggt ccaatgcccg ttgatgacga
     5281 ctggaagagt aagatcatgc acgtcagttt gaaattcggt gattgtttga tcatgatatc
     5341 cgacggaccg aagggctaca aaagttcaac tgaagggaac atccaattat cagtcgactt
     5401 tgacgatgcc gataaaatgg aaaggacatt taataaattg gccgggggcg gaacaatcgt
     5461 tttgccgtta gcgaaacaat tttggggcgc aagattcggg atgctgaaag ataaatatgg
     5521 tattggatgg atgttcaatc atgaagaaaa ataattagtg atgaaccgac aaaccttatt
     5581 cattgtattt cttttactgc cattagcttt tacagtaaag gcgcagaatg ctgctggtaa
     5641 aaacgacgtg atgatgaaaa tgcagagttt gcgaaatgcg ctgctggcaa aagatagtgt
     5701 cacgttatca tcgttgttag ccgatgatgt tacttatatt cattccagcg gttttgtcca
     5761 gacaaaatct caactgataa aagacgtaat gagcggcttc caggattata aatctatcga
     5821 gccttcagac atgaatattc ggatgtatga taatgcgagc gtggtcaccg tcaaactaaa
     5881 aacaagtgtg atctttggcg gtaagccgac ggatctaaat ctgcttgtaa cattaacttg
     5941 gatcaaaatg agcggcgact ggaaactggt tgcccgggaa agtgtgaagt tgcctgacct
     6001 gcaataaaat gtttgagaag tcagaatgaa aaaaatatta ttagaaaaag atcacgttga
     6061 agggatccgg tattatgaag cgtaccggag agaaggtgga tataagagtg tagagaaagc
     6121 attcaaaatg tcgccgaatg atatcgttga ggaagtgaag aaaagcggtt tacgcggaag
     6181 gggaggagca ggttttccaa ctggtatgaa atggagtttt cttgctaaac cggaaggcgt
     6241 tccaagatac cttgtttgta acgcagacga aagtgagccc ggcaccttca aagaccgtta
     6301 tttaatggag tttcttccgc atttgttgat agaggggtta attgtgtcgt cgtacgcgct
     6361 cgggagcggt cgtacatata tttatatacg cggcgaatat gcgtggatag tcgatatcct
     6421 ggagcaagcg atcaccgaag caaaaaataa tgggtggctt ggaaaaaata ttttaggcac
     6481 tggcttcgac tgtgaaatct atatccatcg cggggccggc gcttatatct gtggagagga
     6541 gaccgctttg ctggaaagtc tcgaaggcaa acggggcaac ccgagaatta aaccgccttt
     6601 tccggccgtt cgcggtgttt gggattgccc gactgtcgtc aacaatgttg aaacacttgc
     6661 agccattgtt cctatcatta acatgggcgg cgatgagtac gcgaagatcg gtgtgggaaa
     6721 atccaccggc acaaaattga tatcagcatg tggcaacatc aataagccgg gtgtgtatga
     6781 aattgacatg acgatctctg tggaagaatt tatttatagt gatgaatatt gcggtggaat
     6841 tccgaacggg aagagattaa aggcatgtat tcctggtggc tcttcggtgc caatccttcc
     6901 ggccaattta ttgctgaaaa ctgccaaagg cgaaacccgg tatatgaatt acgaaagtct
     6961 tgcagacggt ggttttgcaa cgggttccat gatggggagc ggcggattta ttgtttttga
     7021 cgaagaccag tgtgtcgttc ggcatacata cacccttgca agattttatc gacatgaaag
     7081 ctgtggccag tgttcgcctt gtcgcgaggg aaccgggtgg atggagaaga tcttaaaaaa
     7141 tattgagtac ggaaagggta agatgagtga tatagatttg ctttgggata tacagagtaa
     7201 gatagaaggc aacacgattt gtccgctcgg cgatgcggct gcatggcctg ttgcagcagc
     7261 catcaggcat ttcagggatg aattcgaatg gcacgtttta aatccggacg aatgcgtgaa
     7321 aagaaattat ggcctggcgc attatgcgga gccccttgaa ttggcaacag tctgatttta
     7381 attttaatct tgaaaagtcc ctttagggat ttagggtatg gcagaacaac cattatttaa
     7441 agtaacgatc gacaacataa cgatacaagt gccggcaggt actactgttt tgaatgctgc
     7501 caggcaaatc ggcggagatg tagctccgcc cgctatgtgc tattattcaa agctgcaaaa
     7561 cagcggcgga aaatgcagga catgtttagt tgaagtaagc agaggatcag ataaagatcc
     7621 gcgccccatg ccgaagctcg ttgcgagttg taagacagcg gtgatggatg gaatggaagt
     7681 aaaaaacatc acttcgcaaa aagttactga tgcaagagca ggcatcgttg aaatgctgct
     7741 catcaatcat ccgcttgatt gtccgatctg cgaccaggca ggcgaatgtg atctgcagga
     7801 tctcagctat gaacatggcc gcgaaggaac gcgctatgag ttcgatcgtc gtacgtttga
     7861 gaagcatacg ctcggcccca acattcaact ccacatgacg cggtgcattt tatgttaccg
     7921 gtgtgtattt gcggctgacc agcttaccaa tacaaggcag cacggaattc tagacagggg
     7981 agatcattca gagatcgcga cgtacatcga aaagagcctc gataatgatt tcatcggaaa
     8041 catcatcgat gtttgtcctg taggggcatt aacagacaga acattccgat tcaaaaatcg
     8101 ggtttggttt acgaagccgg ttgacgccca tcgtgattgt ccgaaatgtt gcggcgaagt
     8161 aagattgtgg atgcgtggcg atgaagtgtt ccgtgttact gcgcgtaagg acgagtgggg
     8221 cgaagtaagg gatagtacca aaggaacgcc cggatggatc tgtaacgaat gccgttttga
     8281 aaaaaaggat actaaagatt ggatgatcga agggcctaca aaggtgaaca ggcactcggt
     8341 tattgcttca aataaatatg ttggcgtgac caagccgcct gaatttttgg aagatatcat
     8401 gcatggaact cacccgcgat acatgctgga cattcacaat gtaagcgaag tgaatgcggc
     8461 ggaggtgagg ttggatttga ttgaggggcc cgctcacacc gaggattttg aaa
//
LOCUS       DASQJI010000669         3003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1317680,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000669 DASQJI010000000
VERSION     DASQJI010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317680"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1332)
                     /locus_tag="VEV83_18125"
     CDS             complement(<1..1332)
                     /locus_tag="VEV83_18125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47103.1"
                     /translation="MYRILLAASIVCFAHAQAKAQQIVYSSSLGNSGTARCHIIGMVK
                     DHIVVWNFNFGKYSHSYIMIYDTNLKLSRKVSTNILKSDTLYGIDFIHTSDYFCVFYQ
                     CRKNKCYLSKLAWFNENGNCTRIRTVDSIFLNANNAAITKYPVGVIQSHESGSFALVK
                     ATPDAEKSSINVKYSLYNDNLIHSGDVKLPFDYNTGNINSFILDENKNLWLTETENNN
                     DRSLIRVYKINTLTDNVTNTVRSIGNGHLVARSVNIFVDKKYLVYGEWTSAFDSTISA
                     TTIKGIFVWQLHPDLTDISTDTVLEISAATDSCLAGKNFFTLQAVRSADNGFSFAVGP
                     GKLFSSFSHNGLYNPPDSYSYRNFLLYEPRPPSSPLYSSVVPVDNGLYKDLNYRSPDP
                     FGTYPEHNPQGPPPLPHDSAGPILIGDIITGVVNINSQNKIVWRSCFIKAID"
     gene            1526..>3003
                     /locus_tag="VEV83_18130"
     CDS             1526..>3003
                     /locus_tag="VEV83_18130"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HYK47104.1"
                     /translation="MQKLRSEGWFARKGKDGFIYRAWMKKQGIPSFEFSGKPVIGICN
                     TWSELTPCNSHFRELAEWVKRGVLEAGGLPVEFPVMSLGETLIKPTAMLYRNLVSMDV
                     EESIRANPLDGVVLLCGCDKTTPALVMGACSVNLPTIVVSGGPMLTGRHRGKSISTSD
                     VWRFSEEVRSGKMTDEEMMLAEAGMCRSDGHCAVMGTASTMACMVESLGLSLPGNAAI
                     PAPDANRKVIAQMSGIEIVNMVKKNLRISDILTREAFQNCIKANAAIGGSTNFVLHLL
                     AIAGRIGVLLTIDDFDKYSNDVPLIANMQPSGLYFMEDFYYAGGLPVVMKELSPLLHR
                     DCITVNGKTVAENYIHAVCYNDEVIGSISKPFNKTSGIVVLKGNICEEGAVMKPSAAS
                     VHLMKHIGKAVVFEDIDDYKRKINDESLDVDENSILVLKNVGPRGYPGMPEVGNLGLP
                     PKLLAKGVTDMIRISDGRMSGTGFGTVVLHVSPEAAAGGTLG"
BASE COUNT          867 a          610 c          714 g          812 t
ORIGIN      
        1 gtcaatggcc ttaataaaac agctccgcca cacgatttta ttctggctgt ttatgttaac
       61 aacaccggtg ataatatctc caatcaatat tggccctgca gaatcatgtg gcaaaggggg
      121 tgggccttgc ggattatgct ccgggtaggt tccaaatgga tcgggcgacc gataattaag
      181 gtccttataa agtccgttgt ctacgggaac aacagaagag taaagcgggg agctgggagg
      241 tcgcggctca taaagtaaaa aattgcgata agaataacta tctggaggat tatacagacc
      301 attatgagaa aaactactaa aaagttttcc gggcccaaca gcgaaactaa atccgttatc
      361 agccgatcgg accgcctgca gtgtaaaaaa gttcttacca gctaaacacg aatctgttgc
      421 ggcactgatc tcaagaacag tgtccgtcga aatgtctgtt agatccggat gcaattgcca
      481 aacgaaaatt ccttttatag ttgttgcact aatagtacta tcgaatgccg atgtccattc
      541 accataaacc aaatattttt tgtccacaaa aatatttacg cttcttgcga ccaggtggcc
      601 attcccgata ctcctgacag tgttcgtaac gttgtctgta agcgtattta tcttatacac
      661 tcttataaga cttcgatcat tattgttttc tgtctctgta agccaaaggt tcttgttctc
      721 atcaaggata aaagaattga tattaccagt attataatca aacggcagtt taacgtcacc
      781 tgagtgaata agattatcat tatacaaact atacttaaca tttatagagc ttttttccgc
      841 atcaggagtt gctttaacca atgcgaaact tcccgattcg tgtgactgaa taacgccaac
      901 cggatattta gtaattgccg cattatttgc gtttaaaaaa atgctgtcaa ccgttctaat
      961 tctggtgcaa ttgccgtttt cattaaacca ggcaagcttg cttaaataac atttgttttt
     1021 ccggcactgg tagaaaacgc agaaataatc ggaggtatgg ataaaatcaa ttccataaag
     1081 ggtatcactt ttaagaatat ttgtgctcac cttcctggaa agttttagat tggtatcata
     1141 aatcataatg tatgaatggc tgtattttcc aaaattgaaa ttccatacaa cgatgtggtc
     1201 ttttaccata ccaataatat ggcaacgcgc agttccactg ttcccgagag atgaagaata
     1261 aactatttgt tgggctttcg cttgtgcatg tgcgaaacaa acaattgaag cagctaaaag
     1321 gattctatac ataaggatca atagcaagtt accgctaaat agctttgtga acatttcaga
     1381 tacggccttt gaggcgatcg tttggtgagt ctacaaggac tgttatcggg cagccaggcg
     1441 aaatgcaaaa tttaaaaata tagtgaccga gttccaattc tcggtttttc cgaacacatt
     1501 acttacgttc gctgaaaata ttttcatgca aaaacttcgc agcgaaggct ggtttgcgcg
     1561 caaaggaaaa gatggattta tctaccgcgc atggatgaag aagcaaggaa ttccttcatt
     1621 tgaattctcg ggaaagcctg tgatcggcat ttgcaataca tggagtgaat taacgccatg
     1681 caattcacac ttcagagaac ttgccgaatg ggtgaaacgc ggtgtgctcg aagccggcgg
     1741 attgcctgtt gaatttccgg ttatgtcgtt aggggaaacg ttgataaaac caacagcgat
     1801 gctttatcga aaccttgtga gcatggacgt ggaagaaagc attcgcgcga atccgcttga
     1861 tggtgtggtg ctgctctgcg gctgcgataa aacaacacct gcgctggtaa tgggtgcatg
     1921 cagcgtaaac ctgccgacga tagttgtgag cgggggaccg atgctaacgg gccggcatcg
     1981 cggaaagagt atcagcacca gcgacgtttg gcgatttagc gaagaagttc gcagcggaaa
     2041 aatgactgac gaagaaatga tgctcgcaga agccggcatg tgccggagcg acggtcattg
     2101 tgcggtgatg ggaactgctt ccacaatggc atgcatggtg gaatctctcg ggctttcgtt
     2161 gccaggtaac gcagcaattc cagcgccgga tgcgaacagg aaagtaattg cgcaaatgtc
     2221 cggcatcgag atcgtcaaca tggttaaaaa aaatttgcgt atcagcgata ttcttactcg
     2281 tgaagcattt caaaattgca tcaaggcaaa tgcggcgatc ggcggctcca caaatttcgt
     2341 gttacatctc ctggctatcg cgggcaggat cggcgtgctg ctcacgatcg atgattttga
     2401 taaatactcg aacgatgttc cactcatcgc aaacatgcaa ccgtcgggcc tttatttcat
     2461 ggaagatttt tattatgccg gcggattgcc ggtcgtgatg aaagaactgt cgccgctgtt
     2521 gcatcgtgat tgcattactg tcaacggaaa aaccgttgca gaaaattata ttcacgccgt
     2581 gtgttataat gatgaagtga ttggttctat cagtaagcct tttaataaaa cttccggtat
     2641 tgttgtgctg aaaggcaaca tttgcgaaga aggcgccgtg atgaaaccat ccgcagccag
     2701 cgtgcatttg atgaagcaca tcggcaaggc ggttgtgttt gaagacatcg atgattataa
     2761 gcgaaaaata aacgatgaaa gtttggatgt cgacgaaaac agtattcttg tattgaaaaa
     2821 tgttggaccg cgaggttatc ccggcatgcc tgaagtaggc aacttaggtc tgcctccaaa
     2881 actgctggca aaaggtgtta cggacatgat acgcatttcg gatggccgaa tgagtggaac
     2941 ggggtttggc accgttgtgt tgcatgtttc tcctgaggct gcagccggcg gaacactggg
     3001 cat
//
LOCUS       DASQJI010000670         7639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2395378,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000670 DASQJI010000000
VERSION     DASQJI010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7639
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2395378"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1601)
                     /locus_tag="VEV83_18135"
     CDS             complement(<1..1601)
                     /locus_tag="VEV83_18135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYK47105.1"
                     /translation="MIAARNITLAYGKRVLFDEVNLAFTRGNCYGIIGANGAGKSTFL
                     KILSGEIEPNKGTVEITPGERMAVLKQNQFEFDEQTVLNTALMGHAKLWKMMHERELI
                     YAKADFDEEDGMRAAELEHDFGEIGGYEAESDAASLLSSLGVTEEFHQSLMKDIPGNL
                     KVRVLLAQALFGNPDILLLDEPTNGLDIETIGWLENFLADYENIVLVVSHDRHFLDAV
                     CTHVADVDRQKIRIFTGNYTFWYESSQLMSRQISDKNKKTEEKRQALLDFIARFSANA
                     SKSKQATSRKKALEKLTIEEIRPSNRRYPGIIFQPLRDVGNQILNVENLSKAVDGRRL
                     FDKVTFSINKGEKIAFLSKDPLAVTNFFEIINGNAKPDTGKFEWGTTITKAYLPLENS
                     EFFEGGLTLIEWLRQYVPAHVTEADEPFLRGFLGKMLFSGDDVLKKINVLSGGEKVRC
                     MISRMMLQNPNLVVLDQPTNHLDLESIQAFNEGCQMFPGIVLLTSHDHTFMQTVANRV
                     IELTPNGMIDRLMSFDEYMEDERVHT"
     gene            complement(1710..2303)
                     /locus_tag="VEV83_18140"
     CDS             complement(1710..2303)
                     /locus_tag="VEV83_18140"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HYK47106.1"
                     /translation="MAIKIYTKTGDKGKTALIGGTKVFKNHIRIETYGTIDELNSHIG
                     LVRDYTPEEDQRDILKQVQDRLFVIGSSLACDPAKETGMNIPDLKEEDVTLLEKEIDR
                     MTEQLPVMKNFVLPGGHSAVSSTHIARCVCRRAERCVVNMQQHDLFVAPVILKYLNRL
                     SDYLFVLARFIAQELHVAEITWAGRNTKLPTPPSLEA"
     gene            2757..3824
                     /locus_tag="VEV83_18145"
     CDS             2757..3824
                     /locus_tag="VEV83_18145"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HYK47107.1"
                     /translation="MNTPKFAQLKPSFHTELKRRISQYFETTGKSTSGNFQLWIKAVI
                     LLSVYIYLYIQLVFFTPPGWWAIAECVILGCTVAAIGFNIMHDGAHGSFSKYPLLNKM
                     GAMTLGFLGGSHFMWNMKHNVIHHAYTNIDGVDDDIDAKPFLRMATTQKKYSMHKFQH
                     WYFWFFYCLLHAYWIFFSDYKKYFTRKIGDVPLKKMTLNDHFSFWIYKIISYAMFLVI
                     PIYTVGFVDTVIGFLIMTMVAGFILSIVFQLAHTVEDTQFPIPDELTGKMEDEWAIHQ
                     LRTTANFATRNRAISWFVGGLNFQIEHHLFPKISHVHYPVISKIIRQACQEYNIAYLE
                     YPRMYQAVISHVSFLRRMGKD"
     gene            complement(3825..4550)
                     /locus_tag="VEV83_18150"
     CDS             complement(3825..4550)
                     /locus_tag="VEV83_18150"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HYK47108.1"
                     /translation="MLSRNEAKYIQSLYHKKNRDAEEMFVAEGVKLVGELLRSGLKIY
                     KIYALQKWIDHNADVDDAVVVTETELKKISGFETPNEVIAIAGKKAEVAVPDLKGKIT
                     LLLDGIQDPGNMGTIIRTAHWFGIQNIIAANDSADVYNPKVIQASMGSFLHVNIFYRD
                     LKIFLSENTIPVYGTVLNGEDISMLARPDECVLIIGNESKGIRPDIIGFVEKKITIKR
                     IGAAESLNAAIAAGIILWRFCNR"
     gene            4652..6976
                     /locus_tag="VEV83_18155"
     CDS             4652..6976
                     /locus_tag="VEV83_18155"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HYK47109.1"
                     /translation="MKVKNYPVDTPFVYNNKININADLSKDEKTRLEENLVNYWADSL
                     FARRVQKLGVLYSLKNPPVFDTAMISITRRFMSSFLFSQGYFNVDLKDTFYVDTFHKS
                     GKPDQLRTTVVMNIDPGKRTIIDSLGYNLTDSALQRIARRNAGDKKIDPGKTPYSKEA
                     IAAELNRLVALYRSRGYFLMRRDNLAAVVDTTDISLLKVTIDPFEQAELIQKAAEKRK
                     QNPTAIVTIEQRRLADTTTTNSDSLFLKRFVNGNVYYFPETHVAEFPDSIMMQMDSFK
                     SWSAKNYTVLYRQGVFNPKIFKNSNFVHPGRLYNDDLFYKTINTYGQMGSWKQVDTRT
                     VIRGDSVDIYYFLYPDRKQNITYNLEASRNTGDYLSLSDLFGLALNITYRNRNVWHRA
                     VQSTTSFTNAVELFNQSSAFLQAFQISLGQTYTIPKPFLPFKIKKPGKLDFGRTVISA
                     NASYAERKDFFRLRSAVANYGWDWKNKTNIWQVRIPNIELYSLDTLPLLAQAFDENPF
                     LRNSFNTGSVIGGQVSWNKTFPGKWNTTNYRRLSGEISGLPLVISRDSKVYQFVKVEG
                     EIRKQVALRKTAVVFRALAGIGFNYNENSPSGKTLPFFKQFVAGGPNSMRAWPLRQLG
                     LGSSLLSDTSSTFRDRYGDMQLEANAEYRYPIAHYSSVNINGALFIDAGNIWNVRKDT
                     NNPNSEFDLARLGKDIAIGIGTGLRFDFNYFLIRVDMGIKFKDPARFETNGFEFLRNF
                     TWTNKEFAKYDDKGNVISPRRNNYAIQLGIGLPF"
     gene            complement(6953..7639)
                     /gene="truB"
                     /locus_tag="VEV83_18160"
     CDS             complement(6953..7639)
                     /gene="truB"
                     /locus_tag="VEV83_18160"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HYK47110.1"
                     /translation="MQGSVVLIDKPLRWTSFDAVKKIRILTGVSKVGHAGTLDPLATG
                     LLIICTGSFTKNILEYMGMEKEYTGTIIAGATTASYDLESEPEDFKDLSNLSSDSIYA
                     AAQNFKGEILQVPPVHSAIKQNGKPVYLSARKGKEVVLDARKVTISEFEITGILLPAI
                     SFRVVCSTGTYIRSLANDFGNVLGTGAYLGSLRRTRIGKFSVEDSLTPQAFEEHVKSL
                     KLDSEGQPNT"
BASE COUNT         2074 a         1754 c         1623 g         2188 t
ORIGIN      
        1 gtgtgaacgc gctcatcttc catatactca tcaaagctca ttaaccggtc gatcattcca
       61 ttcggtgtga gctcgataac gcggttggcg accgtttgca taaatgtgtg gtcatgcgaa
      121 gtgagcagaa cgattcccgg aaacatctgg catccttcat tgaaagcctg gatactttca
      181 agatcgagat ggttcgtagg ctgatcgagt acaacaagat ttggattttg taacatcatc
      241 cggctgatca tgcaacgaac tttctcgccg ccgctgagca catttatctt ctttagaaca
      301 tcgtcgccgc tgaataacat ctttccaaga aaacctctaa ggaatggttc atctgcttcc
      361 gttacatgcg ctggcacata ttgtcttaac cattctatca gtgtgagtcc accctcaaaa
      421 aattcactat tttccaaagg caaatacgct ttcgttatcg ttgtgcccca ttcgaatttg
      481 ccagtgtccg gctttgcatt gccgtttatt atctcgaaaa aatttgttac agccagtggg
      541 tctttactta aaaaagcgat cttttcccct ttgtttatac tgaaggtcac tttatcaaac
      601 aaacgtctgc catcaactgc cttgctgaga ttttctacat tcaggatctg gttgccaaca
      661 tcacgcaatg gttgaaaaat tattccggga taacggcggt tgctgggacg tatttcttcg
      721 atagtcaatt tttccaaagc tttctttctc gatgttgcct gcttgctctt tgatgcattt
      781 gcagaaaacc gtgcaataaa atcaagcaaa gcctggcgct tctcctctgt ctttttgttc
      841 ttgtcgctga tctggcggct catcagttgc gagctttcat accagaaagt atagttgcct
      901 gtaaaaatcc tgatcttttg ccggtcgaca tccgccacat gcgtgcaaac ggcatcgaga
      961 aagtgacggt cgtggctcac gacgagaaca atgttctcat agtccgcgag aaaattttca
     1021 agccagccga tggtttcaat atcaaggcca ttcgtcggct catccaataa taatatatca
     1081 ggattaccaa acagcgcttg tgcaagcaac acgcgcacct tcaggttacc cggaatgtct
     1141 ttcatgagac tctgatgaaa ttcttccgta acgcccaggc tgctcagtaa acttgcagca
     1201 tcgctttcag cttcgtagcc gccgatctct ccaaaatcat gctccagttc tgccgcgcgc
     1261 attccatcct cttcatcaaa atcagccttc gcatagatca gttcccgttc gtgcatcatt
     1321 ttccaaagtt tcgcatggcc catcaacgcc gtattcaaaa cagtctgctc atcaaattca
     1381 aactggtttt gtttcagcac cgccatccgt tctcccggtg tgatctcgac agtgcctttg
     1441 tttggctcaa tttccccact cagtattttt aagaatgtgg atttgccggc gccattggcg
     1501 ccgatgatcc catagcaatt gcccctcgtg aaagcgagat tcacttcatc gaacaacacg
     1561 cgtttaccat aagcgagggt aatatttctt gcagctatca ttgcgattta cgatttacga
     1621 tgttacgatt tttcgagggc gcaaaagtag ggtatagacg gggaagtttt tgtgaaggaa
     1681 ttgtttactc gcatctggcc gccacctcat tacgcttcaa gcgacggggg cgtcggaagt
     1741 ttcgtgtttc tgcctgccca ggtaatttcc gccacatgca attcctgcgc gataaaacgt
     1801 gcaagtacga agagataatc actcagccgg ttaagatatt ttaaaataac aggtgcaaca
     1861 aacaggtcat gttgttgcat attcacgacg cacctttctg cacgccggca aacacagcga
     1921 gcaatgtgtg tcgacgaaac cgctgaatgc ccgcccggca acacaaaatt tttcattacg
     1981 ggcaactgtt cggtcatccg gtcgatctct ttttcgagta acgttacgtc ctcctccttc
     2041 aggtcaggaa tgttcatgcc cgtttcttta gcaggatcgc atgcaagaga agagccgatc
     2101 acaaagagac ggtcctgtac ttgttttagg atatcgcgct gatcttcttc aggcgtataa
     2161 tcgcgaacaa ggcctatgtg ggaatttagt tcgtcgattg ttccataagt ttcaatgcgg
     2221 atatggtttt taaaaacttt agttcctccg atcaacgccg tttttccctt gtcacccgtc
     2281 tttgtataga tcttgatcgc catatgctaa ttacatgaaa gtacaacaaa gatagccccc
     2341 gtcgaaacgg gacggccgta tttcccatta aaaattaagg gtgcgtttgt atgcgcaagc
     2401 aatagccgcc tcaaacgaga caactaacaa cccactgaaa aattatttag ttgcactcct
     2461 tgtttttata tcgatcacct tgccgccggc aatgaacgaa taatggaatg tgccggtggg
     2521 taacgaagga cgctggacag atcgcgcatt tgtcaatgaa aactacatta gctcatcttc
     2581 cgagaccatg gactaaagat gcaggatggc tccattgttc ctgtttcgag aagaaaatgg
     2641 cacagcgtta aacaaaagct ttcttttttc cattgacaga cgattagaag gaatgttggc
     2701 cgcgttatgt tatctttgcg ccacgttatc tctattattt caggtaatgt caatacatga
     2761 acactccaaa atttgcacag ctcaaacctt cttttcatac agaactaaaa agacgtattt
     2821 cacaatattt cgaaaccacc ggtaaatcta catccggcaa cttccagcta tggataaaag
     2881 cggttatcct gctttcggtg tatatatacc tgtatatcca gcttgtcttc tttactccgc
     2941 cgggatggtg ggcgattgcg gaatgcgtca ttcttggttg cacggttgca gccattggct
     3001 ttaatataat gcacgatggc gcgcatggca gtttcagtaa atatccgttg ctgaacaaaa
     3061 tgggtgcaat gacgctcggg tttttaggcg gaagccactt tatgtggaac atgaagcata
     3121 atgttattca ccatgcctat acgaatattg acggagtaga tgatgatatt gatgccaaac
     3181 catttttgcg gatggccaca acgcagaaaa aatattccat gcacaagttc cagcattggt
     3241 atttctggtt cttttattgt ctccttcatg cttactggat ctttttttct gactataaaa
     3301 aatatttcac aaggaagatt ggcgatgtac ctctgaaaaa aatgactttg aacgaccact
     3361 tttctttttg gatctataag atcataagct atgcgatgtt tcttgttata ccgatctaca
     3421 ccgtcggttt cgtggataca gtgatagggt ttcttatcat gaccatggtt gcagggttca
     3481 ttttaagtat tgtgttccag cttgcacaca ctgttgagga tacgcaattc ccgatacccg
     3541 atgaactaac cgggaaaatg gaagacgaat gggcaataca ccagcttcgt accaccgcaa
     3601 attttgctac aagaaatcgt gctatctcgt ggtttgtggg cggattaaat ttccagatag
     3661 aacaccattt gttcccgaaa atttcccacg ttcattatcc tgttatcagc aaaattatca
     3721 ggcaggcctg ccaggagtac aatattgcat acctggaata cccgcggatg taccaggccg
     3781 tgatatcgca cgtttctttc ttaaggcgaa tgggaaaaga ctgatcaacg gttgcagaat
     3841 ctccatagaa tgatgccggc tgcaattgcg gcgttcaatg attctgcagc tccgatacgc
     3901 tttatcgtta tttttttttc aacaaaacct attatatcgg gtcttatacc ttttgattcg
     3961 ttcccgatga tgagcacgca ttcatcagga cgcgcgagca ttgaaatatc ttctccgttc
     4021 aaaaccgtcc cataaacagg aattgtgttt tcagataaaa atattttcag atctctataa
     4081 aaaatattta catgcaggaa actgcccatg cttgcctgta tcacttttgg attataaaca
     4141 tccgcgctgt catttgcagc aatgatgttt tgtataccga accaatgcgc agtgcgaata
     4201 atcgttccca tgttgccagg atcttgtatg ccatcgagca gtaacgtgat ctttcccttc
     4261 aaatccggaa ccgctacttc agcttttttt cccgcaatcg cgatcacttc attgggcgtt
     4321 tcaaagcccg atatcttttt taattcagtt tcggtaacta caactgcatc gtcaacatcg
     4381 gcgttatggt ctatccattt ttgtaacgca taaatcttat aaattttcaa accagatcgc
     4441 aataactctc cgacgagctt gactccttct gcaacaaaca tttcctcagc gtccctgttt
     4501 tttttatggt ataaactttg gatatatttg gcctcattcc tgctgagcat gttctatggt
     4561 tttatctgct agaaaaattt gttttatcgc accggtatta atttgctgca tttgttcctg
     4621 tacgagcgaa aagtttctgt tttttagaag tgtgaaagtt aagaactacc cagttgatac
     4681 tcctttcgtc tacaataata aaataaacat caatgcagat ctgagtaagg atgagaaaac
     4741 gcggttggaa gaaaaccttg tgaattattg ggccgacagt ttgtttgcca ggcgcgttca
     4801 aaagctaggc gtattatatt cactgaagaa tcccccggtg tttgacactg ccatgatcag
     4861 catcacgcgc aggttcatga gcagttttct tttctcacag ggatatttca atgtggatct
     4921 gaaagacaca ttctacgtcg atacattcca taaaagcggc aagcccgatc aattgagaac
     4981 gacggtcgta atgaatatcg acccgggcaa aaggacgatc attgattcgc tcggttataa
     5041 tttgacagat tcggcattgc agaggatcgc acgacgcaat gctggcgata aaaagatcga
     5101 cccaggtaaa acgccatact caaaagaagc gatcgcagca gaactcaaca ggctggttgc
     5161 gttgtacaga tcgcgcggat attttttgat gcggagagat aaccttgcgg cggttgttga
     5221 cacgacagat atttcactgc tgaaggttac tatcgatccg tttgaacaag ctgagctgat
     5281 tcaaaaggct gcagaaaaac gaaagcaaaa tcctacggcg atcgttacga ttgaacaaag
     5341 aaggctggca gatactacaa ccactaacag tgattccctg ttcttgaaac ggtttgtcaa
     5401 tggaaacgtt tattactttc ccgagacgca tgtcgcagag ttcccggaca gtatcatgat
     5461 gcagatggat tcgttcaaaa gctggtcggc gaaaaattat actgttctat accgccaggg
     5521 cgttttcaat ccgaagatct ttaagaactc gaatttcgtc cacccgggac gtttatacaa
     5581 cgatgacctg ttttataaaa cgatcaatac gtatggacaa atgggttcgt ggaagcaggt
     5641 tgacacaagg accgttattc gcggcgactc ggtggacata tattactttc tttatcccga
     5701 cagaaaacaa aacattacgt ataaccttga agcgagcaga aacaccggcg attatttaag
     5761 cctgtccgat ctttttggtc ttgcgctgaa cattacatac cgcaacagga acgtgtggca
     5821 cagggcggtg cagtcaacaa caagttttac aaatgcggtg gaattgttca accaaagcag
     5881 cgcatttctg caggcgtttc aaatatcgtt agggcaaacc tataccattc cgaaaccttt
     5941 tctcccgttc aaaataaaaa agccaggcaa gctggatttc gggcgaacgg tgatcagtgc
     6001 aaacgcatca tacgccgagc gaaaggattt tttcaggctg cgatcggcag ttgctaatta
     6061 tggctgggac tggaaaaaca aaacgaacat ctggcaggta agaataccaa acattgaact
     6121 ttattccctg gatacgttgc ctttgcttgc gcaagcgttc gatgaaaatc cattcttaag
     6181 aaactccttc aataccggct ctgttattgg tggccaggtt agctggaata aaacttttcc
     6241 aggcaaatgg aatactacga actaccgacg cctgtctggt gaaatttcgg gattaccatt
     6301 agtgataagc cgcgattcaa aagtttatca attcgtaaaa gtggaaggtg aaataaggaa
     6361 acaggtagcc ttgcgaaaaa cagctgttgt cttccgcgcc ctcgcaggaa taggatttaa
     6421 ttataatgaa aatagccctt cgggtaagac cttgccgttt ttcaaacagt ttgtagcggg
     6481 aggtcccaac agcatgcgag catggccatt gcggcaatta ggtttaggtt cttcgctgtt
     6541 aagcgatacg tcaagtacct tccgcgaccg ctatggggat atgcaattgg aagcaaatgc
     6601 tgagtaccgt tatccgattg ctcattattc gagcgtgaac atcaacggcg cgttgttcat
     6661 agatgccggc aatatctgga acgttaggaa agacacaaac aacccgaaca gcgaattcga
     6721 ccttgcacgg ttaggaaaag acatcgcgat cggtatcggc accggtctgc gttttgactt
     6781 taattatttt ttgatcaggg ttgacatggg tatcaaattc aaagatccgg cccggtttga
     6841 aacgaatgga tttgaattcc tccgaaattt cacatggacg aacaaggagt ttgcgaagta
     6901 tgatgataag ggtaacgtga taagtccgag gcgcaacaat tacgctatcc aattaggtat
     6961 tgggttgccc ttctgagtcg agcttaagac ttttgacgtg ttcttcaaaa gcctgcggag
     7021 ttagagagtc ctcaacagaa aacttaccaa tgcgcgttct tcgtaggctg cccaaatagg
     7081 cgcctgttcc aagaacgttt ccaaaatcat ttgcgaggct tctaatgtat gtgccggttg
     7141 aacaaactac cctgaaagaa atcgccggca acaaaatacc ggtgatctca aattcgctga
     7201 tggtaacttt tctcgcgtcc agcacaactt cttttccctt tcttgcactc aaataaaccg
     7261 gcttaccatt ctgtttgatc gctgaatgca ccggtggcac ctgcaagatt tcccctttaa
     7321 aattttgcgc agcagcgtat atcgaatcgc ttgataaatt actcagatcc ttgaaatctt
     7381 caggctcact ttcaagatcg taactagcag ttgtcgcgcc ggcaatgatc gttcccgtgt
     7441 attctttttc catgcccatg tattcaagaa tatttttcgt aaaactgcca gtgcatatga
     7501 tcaaaagccc cgtcgccaat gggtccaacg tgcccgcgtg tcccactttt gatacaccgg
     7561 tcaatattcg tatttttttt actgcatcaa acgacgtcca gcgcaatggc ttgtcgatta
     7621 aaacgacact gccctgcaa
//
LOCUS       DASQJI010000671         2410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_399087,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000671 DASQJI010000000
VERSION     DASQJI010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399087"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VEV83_18165"
     CDS             complement(<1..660)
                     /locus_tag="VEV83_18165"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GSCFA domain-containing protein"
                     /protein_id="HYK47111.1"
                     /translation="MQFFANIQIKPLDPPITHKHKILVTGSCFTEHIGNFLLDGKFNI
                     LQNPNGILFDPISVASSLVSYIEKKQYSEQELFCLNETWHSWDHHSRFSNADKDECLK
                     KINRSQREAHAFLENADWLMITLGSAFTYKLVPDSPLSARGEASGEAVANCHKAPAQN
                     FVRHLNTIEEIVSALDSAIHRLFHFNQNLKIIFTISPVRHLRDGVVDNNRSKARLIEA
                     VH"
     gene            complement(754..1605)
                     /locus_tag="VEV83_18170"
     CDS             complement(754..1605)
                     /locus_tag="VEV83_18170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HYK47112.1"
                     /translation="MNARVKLIECPRDAMQGWPRFISTQKKTRYINSLLQVGFDTIDA
                     GSFVSPKAIPQMADTKEVIKNLKPDKSKLLVIVANERGADDAVQFDEVTYLGFPFSIS
                     ETFQIRNANSTIQDSLARVEKISERCERYQKELVIYLSMAFGNPYNDPYSEDVLLLWA
                     DEMVKRNIRIISLADTVGLASAEQIKFACNALIPKYPEVEFGVHLHSSFQNRKEKLTA
                     ALDANCFRFDGALRGIGGCPMAQDDLVGNMDTVFMIEYFRGKNLLKDLDEDALAESLQ
                     IASEIFV"
     gene            complement(1885..>2410)
                     /locus_tag="VEV83_18175"
     CDS             complement(1885..>2410)
                     /locus_tag="VEV83_18175"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYK47113.1"
                     /translation="HIGAKAGANMNKIDGQSFKQGYELGYQLGGYVELNFNKNWGIQP
                     ELLFSQTNTIVDSGFQHIYQDIDEAVIGQKAHLNYLNIPILLRINAGSILTFNAGPQF
                     SILMNKDASLVHNGKQAFKNGDVAAVLGAQVNLGAINFYGRYNIGLNNLNDIDNQDKW
                     KSQQWQLGLGLRIL"
BASE COUNT          637 a          546 c          511 g          716 t
ORIGIN      
        1 gtgaaccgct tcgatcaatc ttgctttgct gcgattatta tcaaccactc cgtcgcgtaa
       61 atgccggaca ggactgatcg taaaaatgat ctttaaattt tgattgaaat gaaataatcg
      121 gtggatcgca gaatctaatg ccgacactat ttcttcgatt gtattcaaat gcctgacaaa
      181 attttgcgct ggtgctttat ggcaattggc gactgcctca cccgaggcct ctccccgagc
      241 gctgagcgga gaatcgggca cgagcttata agtgaatgcc gagccgaggg tgatcatcaa
      301 ccaatcggcg ttttctaaaa atgcatgagc ttctctttgt gaacggttga tcttttttaa
      361 gcattcatct ttatccgcgt tcgaaaaacg gctgtgatga tcccagctgt gccacgtttc
      421 gttgaggcaa aataattcct gttctgagta ctgttttttt tcgatgtatg aaacaaggct
      481 ggatgcaacg cttatcgggt caaataaaat cccgttcgga ttttgcaata tattgaactt
      541 gccgtcgagt aaaaaattgc caatgtgttc agtgaaacat gagccggtga ccagaatttt
      601 gtgtttatgg gtgatcgggg gatcaagcgg tttgatctgt atgttcgcaa aaaattgcat
      661 tggctcaaac tttagaattt aaacgcaacg gtaagccgtg gtgccctgga cattgaaaac
      721 attttttgat ttttgtttcg taaacgatct gcattacaca aaaatttctg aggctatctg
      781 caggctttcc gcaagcgcat cttcatccag atccttcaat aaattttttc ccctgaagta
      841 ttcgatcata aataccgtgt ccatattccc tacaaggtcg tcttgtgcca tcgggcaacc
      901 gccgattcct cttaaagcgc cgtcaaatcg aaaacaattc gcatccaatg cggcagtgag
      961 cttttctttc ctgttttgaa atgaagaatg taaatggaca ccaaactcaa cttccggata
     1021 ttttggaatt aatgcattgc atgcaaattt tatctgttca gcagaagcaa ggccaaccgt
     1081 atcggcgagt gaaataattc gaatatttct tttcaccatt tcatcagccc aaagcaggag
     1141 cacgtcttcg ctgtagggat cgttgtaagg gttgccaaac gccatgctga ggtatatcac
     1201 caattctttt tgataccgct cgcaacgttc acttattttt tcaactcttg ccaggctatc
     1261 ttggatcgtg ctgttcgcat ttcggatttg gaatgtttcg gagatagaaa aagggaaacc
     1321 gagataagtc acttcatcaa attgtacggc gtcgtcggct cctcgttcat ttgccacgat
     1381 caccagcaat tttgatttat ccggcttcaa atttttgatc acctctttcg tatcagccat
     1441 ctggggaatt gctttcggtg aaacaaaact tcctgcgtcg atcgtgtcaa aaccaacttg
     1501 cagcaaactg ttgatatacc ttgtcttttt ttgcgttgaa ataaaacgcg gccagccctg
     1561 catcgcgtcc cgcggacatt caataagctt gacccgtgcg ttcattcagc aaatgtagaa
     1621 attaagcagc gagcggagta ttcgtctcaa accggagtag atgtggtgcg catagaggga
     1681 ccacagaaca ccgaaaaaat gtttgtcaac aacaacccta cttgccctgt taacccggtg
     1741 cgaaaaaatc tgggcaatcc gtgtgcatct gtgaggcatc tttttctctc acggatgtgc
     1801 ggagcctgaa ccggacatcc cggaaataaa aagagcatca tacgctcgta cgatgctctt
     1861 acccaaagca tgattacata tcttctataa gatccttaag ccgaggccga gttgccattg
     1921 ctggcttttc catttatcct ggttatctat atcattcaaa ttattgaggc caatattata
     1981 gcgcccataa aaattgatcg ctcccaaatt gacctgggcg cctaacactg ctgccacgtc
     2041 gccattcttg aaagcttgtt tgccgttgtg cacaaggctc gcatctttgt tcatcaaaat
     2101 gctaaactga ggaccagcat taaacgtgag gatacttcct gcgtttatgc gtaataggat
     2161 aggaatattc aggtaattaa gatgagcctt ttgcccgatt accgcctcgt caatgtcctg
     2221 gtaaatgtgt tgaaaaccgg agtcgacaat tgtatttgtc tggctgaaga gaagttccgg
     2281 ctgaataccc cagttcttgt tgaaattcag ttccacgtag ccgcctaatt ggtaaccaag
     2341 ttcataacct tgtttaaacg attgtccgtc aattttattc atgttagcac ctgcttttgc
     2401 gccaatgtgc
//
LOCUS       DASQJI010000672         5253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_399307,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000672 DASQJI010000000
VERSION     DASQJI010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5253
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399307"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2050
                     /locus_tag="VEV83_18180"
     CDS             <1..2050
                     /locus_tag="VEV83_18180"
                     /inference="COORDINATES: protein motif:HMM:NF039501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5686 family protein"
                     /protein_id="HYK47114.1"
                     /translation="LDSSGKGIIYLSESLTKMAFKKPDKIKLEVLSGRESGSNGYGFN
                     FPTFINFYENNVTVLTEAFAPRGYVSPIADGALNFYKYHYLGSFFEDGKEVNKIQVTP
                     KRTYEPLFTGTINITEADWRIHSLDLMLTKESQLELLDTLQIKQIHFPVSNDVWRTKD
                     QVVYFTFNILGVDAVGNFLNVFNNYDVNPGFAKKYFNNVIVKYDTAVNKKPKTYWDSV
                     RPVPLEPDEIKDYKVKDSMFRYQRDSGFTQHYRDSLRRMQGKVSVGNILWNGFTRSNY
                     DPKKWTSVAWQPLLKQVSYNTVEGVAANAEATIRRAFPNVSRELSFTPHIRYGFSNTH
                     FNAWGTLSWSKRNFWWNHDSLNDEIDAGFGRSNFSFSGGKRVSQFNKDEPITPLLNSV
                     YTLFFNHNYMKIYENYFAALNYDGRAESGVEYKINLLYEDRLPLNNTTDFAIIKYDSV
                     KFTPNYPFEIIDKQFAQHQAVILTAAIEYQPGQKFIQYPHYKMPLGSRYPTFTLSYQK
                     GLRNALGSDVDFDKWNFTIADHMNFKLAGEFSYNIDIGGFLNDNLVFAQDYRHFNGNQ
                     TIFASKYLNSFQVAPYYANSTTASFYATAHGEHHFNGFLTNKIPMFKRLNWNLVAGTN
                     AFYVNSSNNYVEVFAGLENILKILRFDVVGSYLNGNSGQVAFRIGFGGLLGGKIQMND
                     "
     gene            2265..2702
                     /locus_tag="VEV83_18185"
     CDS             2265..2702
                     /locus_tag="VEV83_18185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47115.1"
                     /translation="MAIQFKIQITKAIIENSKNCGADNDVYQMGKTCAIAVALRDIFP
                     DAYVTNFFLFPFGIDDSRAEELKISLPLIAQQFIKLFDGFYLTPNLRLLLPEFEFTID
                     VPNEVINAINIDEIKELIGSSGKTTTQKTQNKSRARNDLTIVI"
     gene            complement(2856..4289)
                     /locus_tag="VEV83_18190"
     CDS             complement(2856..4289)
                     /locus_tag="VEV83_18190"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYK47116.1"
                     /translation="MKKRLFTRKAGFFGSIAGSRTLLPFLIAMLAGSATMMQSCRKAD
                     FDSNKVSAGSDQNAVTGAYADLQLVADNFVSPVTVVDPKDGTKRLFVVDQVGKVWIIS
                     DGKTLSTPFIDVSSRMVTLMPDYDERGLLGLAFHPNFKNNGKFYVYYTAPPRGKNWDN
                     LSRISEFRVSSDPDKADMSSERVLLEVNQPQFNHEGGTIAFGPDNYLYISIGDGGNAD
                     DIGPGHVNDWYTKNEGGNGQDVKQNLLGNILRIDVDKSGDADHAYGIPADNPFAGKVG
                     KDEIYAYGFRNPYRFSFDMGGSHKLLVGDAGQSLYEEIDDVQKGGNYGWNVKEGFHCF
                     NTSNDLKERNACPVEDSAGNLLLDPVLEVKNYANPEGGGPRTIAIVGGNVYRGKSMPK
                     LYGKYVFGFLSADDEEAEGQVVVAGPSVNGIWPFEVLKLKSFPDDIGQWLKGFGQDQN
                     GEVYITATTELGPQGNTGKVWKLVPAQ"
     gene            4748..4821
                     /locus_tag="VEV83_18195"
     tRNA            4748..4821
                     /locus_tag="VEV83_18195"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4782..4784,aa:Arg,seq:acg)
BASE COUNT         1544 a         1152 c         1082 g         1475 t
ORIGIN      
        1 tcttgattcg tcgggaaaag gaattatcta tttatccgaa tcgctcacga agatggcttt
       61 caaaaaacca gataagatca agctcgaagt gttgtcgggc cgagaaagcg gatcgaacgg
      121 ttatggtttc aacttcccca cgttcattaa tttttatgaa aacaatgtaa ctgtgctgac
      181 ggaggctttc gcaccacgcg gttatgtgtc acccattgca gacggcgcgc tcaattttta
      241 taaatatcat tacctcgggt cgttttttga agatggaaaa gaagtaaaca agatccaggt
      301 cacgccgaaa agaacctatg agccgctctt cacgggaact ataaatatca ccgaagctga
      361 ctggcgcatt cacagccttg acctcatgct tacgaaggaa tcgcagcttg agttgctcga
      421 tacactgcag ataaaacaaa ttcattttcc ggtttcaaat gatgtgtggc gcaccaaaga
      481 ccaggtcgta tattttactt tcaatatttt gggtgtggac gcagtgggaa actttctgaa
      541 cgtgtttaat aattacgatg tgaatcctgg ctttgcaaaa aaatatttca acaacgttat
      601 cgtgaaatat gacacagcag tgaataagaa accaaaaact tactgggatt ccgtgcggcc
      661 tgttccgctt gaaccggatg aaataaagga ttacaaagta aaagacagta tgttccgcta
      721 ccagcgcgat tccggcttta ctcaacatta ccgcgattcg ctgcgaagaa tgcagggcaa
      781 ggtgagtgta gggaatattt tgtggaatgg tttcacacgt tccaattacg atccgaagaa
      841 atggacatcg gtcgcatggc aaccattgct gaaacaggtc tcgtataaca cagttgaagg
      901 cgtcgcggca aatgccgaag caacgataag aagagcattt ccaaacgtga gccgtgagct
      961 gtcttttaca cctcacatcc gttacggttt tagcaatacg cattttaatg cgtggggaac
     1021 actgagctgg agcaaaagaa atttctggtg gaatcatgat agtctgaatg atgagatcga
     1081 tgcaggtttc ggccgaagta atttctcctt tagtggcggc aaacgtgtga gccaattcaa
     1141 caaagacgaa ccaataacgc cattactcaa tagcgtctat acgcttttct tcaatcataa
     1201 ttacatgaag atctatgaga actattttgc agctttaaat tatgatggca gagcagagag
     1261 tggtgtggaa tacaaaatca acctgctgta cgaagaccgt ttgcccctta ataatacaac
     1321 cgacttcgcg atcattaaat acgatagtgt caaattcacg ccaaattatc cgttcgagat
     1381 catcgacaaa caatttgcgc aacaccaggc tgtgatctta acagcggcga tcgaatatca
     1441 gccgggacaa aaatttatcc agtatccgca ttataaaatg ccgctgggtt ccaggtatcc
     1501 cacatttact ttgtcgtatc aaaagggatt aagaaatgca ctcggcagtg atgttgattt
     1561 tgacaaatgg aattttacca tagccgatca catgaatttc aaacttgcag gtgaattcag
     1621 ttacaacatt gacatcggcg gatttttaaa cgataatctt gtgtttgcgc aggattaccg
     1681 gcacttcaat ggcaaccaaa caatatttgc aagcaaatat ttgaacagct tccaggtagc
     1741 tccttattat gcaaacagca caactgcctc attctatgca acagcacacg gagaacacca
     1801 cttcaatgga tttctcacca acaagatccc catgttcaaa cgtctgaact ggaatcttgt
     1861 tgccggcacc aatgcgttct atgtaaacag cagcaataac tatgttgaag tttttgcagg
     1921 tctcgaaaac attttgaaaa tattgcgctt tgacgttgta ggttcttatt taaatgggaa
     1981 ctccgggcaa gtcgcttttc gcattggctt tggtggattg ctgggcggaa agatccaaat
     2041 gaatgactga cgctagattc gtgtcgcttc aaacgaaaaa tcaaggtctt tccggcgatc
     2101 ttacctgctc aacacgaaaa tcggcactcc cgcaaaccgg aggatccatg aaagttctag
     2161 ctgttatcgt aatagaaaat ttttgtcggg tggccgacgt ggcacgcatt tggcattttg
     2221 tacattgtat tcaatcaaaa taaatcctta aattgaagtt ttttatggcc atccagttca
     2281 agatacagat cacaaaggca atcattgaga actcaaaaaa ttgcggagcc gacaatgatg
     2341 tttaccaaat gggaaaaacg tgcgctattg cggttgcatt gcgggacatt tttcccgacg
     2401 catacgtaac gaattttttt cttttccctt ttggaattga tgacagccga gccgaggaat
     2461 taaaaatatc gctgcctttg atcgcgcagc agttcataaa attattcgat ggtttttatc
     2521 tcactccaaa cctgagactg cttcttccgg aattcgaatt taccattgat gttccaaatg
     2581 aagtgattaa tgccataaac atagatgaga tcaaagaact gatcggcagc agcggaaaaa
     2641 caactactca aaaaacacaa aacaagtccc gcgcacgaaa tgatttgacg atcgttattt
     2701 agtaatgaca agcttgcccg tcatctttta agccctcagt tgcgcaaaaa aaattttcaa
     2761 cataaaacaa atgttgctcc cacaggcttt gaattggttg aaaagaaaat gggctgcgtt
     2821 ttaagcaacc cattcttcaa aagcccttac acctcttatt gagcgggaac caacttccaa
     2881 actttaccag tgtttccctg cggccctaat tctgttgtgg cggttatata tacctcgccg
     2941 ttttgatcct gtccaaatcc tttcagccat tgaccgatat catcaggaaa gcttttcagc
     3001 tttaaaactt cgaagggcca aatgccgttt actgacgggc ccgcaaccac tacttgcccc
     3061 tctgcttctt catcatcggc gcttaagaat ccaaagacat actttccgta aagcttaggc
     3121 atcgattttc ctctatacac attgccgcca acgatagcaa tagtccttgg accgccgccc
     3181 tccgggttag cataattttt tacttcgagc acgggatcaa gcagaagatt tcccgccgaa
     3241 tcttccaccg gacaagcgtt gcgttctttt agatcattgc tggtattaaa acagtgaaaa
     3301 ccttccttca cattccaacc gtaatttcct cccttttgaa catcatctat ttcttcatac
     3361 aacgactgac ctgcatctcc aacaagcagt ttgtggctgc cgcccatgtc aaatgagaat
     3421 cgatagggat ttctaaaccc gtatgcatat atctcatctt tacccacctt accagcaaaa
     3481 ggattatcag caggtatacc atacgcatgg tctgcatccc cgcttttatc tacatcaatc
     3541 ctcaaaatat ttccgagcaa attttgtttt acatcctggc cgttgccgcc ttcatttttt
     3601 gtgtaccaat cattcacgtg tcccgggcca atatcatcgg cattgccgcc atcgccgatc
     3661 gaaatgtata aatagttgtc cgggccgaaa gcaattgttc ccccttcatg gttaaactgt
     3721 ggctggttca cctcgagcag aacgcgttct gatgacatat ctgccttatc cggatctgat
     3781 gaaaccctaa actcagaaat gcgagaaaga ttatcccaat ttttaccacg cggcggtgct
     3841 gtgtaataaa cataaaattt gccattattc ttaaaattcg ggtgaaaggc caaacccagc
     3901 aatcctcttt cgtcgtaatc cggcattaga gtaaccattc tgctgctgac gtcgatgaaa
     3961 ggagtggata aagtttttcc atcggatatg atccatactt ttcctacctg gtctactaca
     4021 aacagtctct tggttccatc cttcgggtcg acaacagtta cgggtgaaac gaaattatca
     4081 gctaccagtt gcaggtcggc gtatgcacca gtaactgcgt tttgatcgct gccagcagaa
     4141 accttattgg aatcaaaatc agcttttctg caactctgca tcatcgttgc tgaaccagct
     4201 aacatagcta ttaaaaaagg taataacgtg cggcttccgg caatagagcc gaagaagccg
     4261 gcctttcgtg taaagaggcg ttttttcatg attaaaattt taggttagaa tgtttgtttg
     4321 aaacacaagc aggcagcctc gcgggaaacg aattgggctg ctggaacggc ttgtttgtac
     4381 ggaaaaattc acggaactaa ggatctggca acagatgatt cataggctat attttttgag
     4441 ttacagaatc aaacggaccg caccggaaaa agaatttccg gttgttttgt aaaacacctc
     4501 gtgttttttg aaggttgcct ggtaacgaaa aaagttttga catttagaaa aaaagaattg
     4561 cgcagttgtt gctgtagctg gtttgaccgc cgttaacagg agtaattagg aagatggttg
     4621 tcgaaattct tattcagcgg ttctctcctc gcttcaagtt ttcatgcttt ggggattgct
     4681 ctttatattt gcagcccgat taatgaattg ggaaagactt cgggtagcag gtaagaaaga
     4741 aattaatggc cccgtagctc aattgaatag agcatttgac tacggatcaa aaggtttcag
     4801 gtttgaatcc tgacggggtc actgataatc aggcacttaa caagaactta agtgcttttt
     4861 tatttgcacc acagcttttg attccatcag taaagatttt tcagagtcct cactgaaaaa
     4921 aaccttggcg ctatcgtcaa tgttaatgaa taattgatcg atactcttaa ccgggaaatg
     4981 tagctgagta aagatttggc tgccgattga acttccgggc ggcaggttgg caaactcatg
     5041 ttgtgcgcag tttgcataca aaggctttcg tctcatttca aaacacatga agcgaagaac
     5101 atccacaatg tgaatatttc tcagtggttt gatttcctgt caacaataag acacactttt
     5161 ttacacaatc atcaagattg tgtctagccg atttttaaaa tatttgagca aacgacaagc
     5221 caacaaatgt tcgattcgac attttgaacg caa
//
LOCUS       DASQJI010000673         7045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_705247,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000673 DASQJI010000000
VERSION     DASQJI010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7045
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_705247"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1012
                     /locus_tag="VEV83_18200"
     CDS             <1..1012
                     /locus_tag="VEV83_18200"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47117.1"
                     /translation="SGTDIWDTEDEFRFAYQTLVGDGEIIAQVLDQDKTDPWNKAGIM
                     ARETLTPGSRHAFIALTSGNGVAFQNRIFTDGSSNNESTGAGIIAPYWLKLKISGNNY
                     SGYASPDGVNWTQIGSTVNAGFGNGIPIYAGLAITSHDNSALSTAHINNYTLSGALAV
                     ELISFSGSLNLDQTVSLQWTTTLESTAKKFIVERSDDDIDFKDIDSAAAQTGGRFALT
                     YQSIDKHPFTGMNYYRLRIVDADGKSSYSAIVAIKVANAKAPKLYPNPANNIVHIVAG
                     TEAIKSINIFDVTGKMILRIPGSTMQTEMDIPIAVLSNGIYFVEITTMNSVFSEKLLI
                     QK"
     gene            complement(1044..2213)
                     /locus_tag="VEV83_18205"
     CDS             complement(1044..2213)
                     /locus_tag="VEV83_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYK47118.1"
                     /translation="MNIIKIRKDTVGCESIVHFNNAGSALMPRPVVEAITKYLTDEEL
                     GGGYEVAEKRWTELSKFYDHAAQLLKCNSRNIAYTTNATDSYNRALSAVHFKDGDVVL
                     VTENDYPSNFIAFISLQKRFGINIVRVKNTSAGEIDLDDLERKIKQHAPRLVSVTHVP
                     TSSGLVQPINHIGKIVAKYDSLFLVDACQSLGQIPVDAIRCGADFISGTLRKFLRGPR
                     GAGILYVSDKALAAGLEPLFIDLRGAQWIAENEYRPRPDAKRFEDWETSYALMMGSQR
                     ALEYLLSIGIENVEQRNEELNSRLREGLSQLGKRLLDKGKNQCSIITFSVDGRTETEV
                     RNFFKEKRINIYTISKSSAIMDFLEKGVEWVVRVSPHYYNTENEIDQFVEAAKQL"
     gene            complement(2318..3502)
                     /locus_tag="VEV83_18210"
     CDS             complement(2318..3502)
                     /locus_tag="VEV83_18210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47119.1"
                     /translation="MKLQAFLFLVVALPLYYHCHNTSRNSAARGEQAATEQATQQSQT
                     DPSIALEADSSGNVSVGKTRAEHKNPFGVLIAKTDDQQIPPGKQVQIAKALGANYIRA
                     RITVTDWKGSSDAYDQYAAAGFKIILNINYDIPRDVTGDKKPIPFVTDLEAYRKTLNS
                     ILDKYKPELAVIENEEDNPGYHSGTAQQYLTQLKTAIEVCHAHGVKVANAGLTNREIA
                     GLVYDDLIRSGKKAEAASFAERAFPERLKSRLKQMYQPNSMVARQLDFGRQVIEGYKT
                     LDLDYVNFHWYEPTQSRGAGPQGIADVQNIDPAVFETVINYVKRSTGKPAITNEFGQL
                     NRSPEIVKQLFQKVLDTGMPYAIWYSADGGEGKAVALQNADGTLRENGVMFRDFIKEH
                     CQ"
     gene            3599..4330
                     /locus_tag="VEV83_18215"
     CDS             3599..4330
                     /locus_tag="VEV83_18215"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HYK47120.1"
                     /translation="MTKLSVNINKLATLRNSRGGNNPNIVQAAVDAQKFGADGITVHP
                     RPDERHIRYQDVKDIKKVILTELNIEGNPTEKKFVDLVLSTRPAQVTLVPDASGQITS
                     NHGWNTIEHKNYLVDIIGVFKKAGIRTSIFVDPAIEMIEGAAETGTDRVELYTESYAK
                     HFKENKESAIIPYIAAAVAARELKLGLNAGHDLDLDNLHYLIKNISWIDEVSIGHALI
                     CDSIYLGFQNTIQLYKRQLNFSDVV"
     gene            4562..>7045
                     /locus_tag="VEV83_18220"
     CDS             4562..>7045
                     /locus_tag="VEV83_18220"
                     /inference="COORDINATES: protein motif:HMM:NF028473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47121.1"
                     /translation="MKKNVLLCFTALTFLAATTVRGQTLVKNMSGANSDVYAVYKKGN
                     AYYIGGAFTYVGLNTGNAALTKSNNDYPNMDFPRFDGQIFSLIPDGSGGWYAGGYFAH
                     VGGVAKSNLAHINSNNTVDAGFTANTNSTVKTIVKVGTRLYFGGDFTTVNGSPRQYAG
                     AVNSSTGALVAAWNPFPSGSVYSIAAALGADTSFWLGGSFQYVNNPAILRPYLARVNN
                     TNGDFISGSLSANSYTYKITTRGDSIFLGGSFTRLGLKTDYLGSITEGANAASQTMPN
                     ANGQIRCIIPDGSGGWYVGGSFSQIGGINKSNVAHINSSKSVDAGFTAAVNGAVYALA
                     KDGTRLYIGGGFSSVNSTPRNYLAAVNASTGAIVAGWDPSANNYVYKLALKDTTVIAV
                     GAFTNIKGYNAYRFAALNKTDGSSIGGFVGYDNQVNSVALGPSDSLLTGGYYTHAGYY
                     SLYSAKVTTSNVKPDPKFPATNGQIYAVVKDGSGNYYVGGSFNQIGGVNQAYIAKLNS
                     NFQLITAWAPQVNGAVRSIILNGSTVYIGGQFTQTNTVTRQYMSALGTANPGANKTWN
                     SSMSSYVYSMVSDGTSIYAGGLFTMVNGSTARNLLAKFDLNGNLDATWNPNATGGGGT
                     VEALAISGTNILAGGSFTTVGGNTRNYLAKLNNTNGSASNWATANSYVYALYVDGTTC
                     YAGGYFTQLTSAGGTMTPRNYLGAIVVGTGNIGMFNPNPSLYVFGITESGTNLYYAGS
                     FTQVNGTERKYLASSSTGGNLQSWNPTANSTARTLVVDGSNIFIGGDFSGFQEVEKQR
                     ASIIRYNNQSLANWAPAIDNVVYDITANAT"
BASE COUNT         1922 a         1608 c         1591 g         1924 t
ORIGIN      
        1 atcagggact gatatatggg ataccgaaga tgaatttcga tttgcttatc aaactctcgt
       61 tggtgacgga gaaattattg cgcaggtgct cgaccaggat aaaaccgatc cctggaataa
      121 agcaggtatt atggcacgag aaacattgac gccaggttca agacacgcat tcattgcact
      181 cacgagtggc aacggtgttg catttcaaaa cagaattttc acggacgggt cgagcaacaa
      241 tgaaagcaca ggcgcgggaa tcattgcacc ctactggctg aagctaaaga tctccggaaa
      301 taactacagc gggtatgcat cccctgacgg agtcaactgg acgcaaattg gttcgaccgt
      361 gaacgccgga tttgggaatg gcattccgat ttacgcgggc ctcgccataa cgagtcatga
      421 caattcagcg ctgtctactg ctcacattaa taactatacg ttgagtggtg cgctcgccgt
      481 tgagttgata agtttttccg gaagcctgaa cctcgatcaa actgtatcgc tgcaatggac
      541 aacaacgctt gaaagcactg cgaaaaagtt tattgtagaa agaagcgatg acgatattga
      601 ttttaaggat attgattctg ctgccgcgca aacgggcgga agatttgccc tgacatatca
      661 aagcattgat aaacatccgt tcacggggat gaactattac aggttaagaa tcgtggatgc
      721 agatgggaag agtagttatt cggcaatagt tgcaattaag gtagcaaatg caaaggcgcc
      781 gaagttgtat ccgaacccgg cgaataatat cgtacacatt gtcgctggaa ccgaagccat
      841 taagtcaata aacatttttg atgtaacagg aaagatgatt ctgagaattc ccggttcaac
      901 aatgcaaacc gagatggata ttcccattgc cgtgttatca aacggaattt atttcgtcga
      961 gatcactaca atgaattcgg tgttcagcga gaagctccta attcaaaaat aatttgccga
     1021 gtcgaaaggt gtgagatgat tgtttatagc tgcttcgcag cttcgacgaa ttgatcgatc
     1081 tcgttttctg tgttataata gtgcggagac actcttacca cccactctac tcccttttca
     1141 aggaaatcca tgatcgcaga acttttggag atcgtgtaga tatttatgcg tttctctttg
     1201 aaaaaatttc ttacttctgt ttcagttcgg ccgtcaacgc taaacgttat tatgctgcat
     1261 tggttttttc ctttgtctaa taatcgctta cctaactgtg ataagccttc gcgcaatctt
     1321 gaatttagtt cctcatttcg ttgctccacg ttttcaatac ctatagataa tagatattcg
     1381 agggcgcgtt ggctgcccat catgagcgca taagatgttt cccaatcttc aaaacgcttt
     1441 gcgtccgggc gtggtctata ttcattttcg gcgatccatt gagcgccacg aagatcaatg
     1501 aacaatggtt ccaaacccgc cgcaagtgct ttgtcagaaa cgtagagaat tccggcgccg
     1561 cgcggtcctc taagaaattt tctgagggtg ccgctgataa aatctgcgcc gcatctaatc
     1621 gcatcgaccg gtatttgtcc tagtgattga catgcatcaa ccaaaaacag tgaatcgtat
     1681 ttagcaacga tttttccaat gtgatttatg ggctgcacga gtcctgaact tgtaggcaca
     1741 tgtgttactg acacaaggcg aggcgcgtgt tgctttatct tcctttcgag gtcatcaaga
     1801 tcgatttcgc cggcgctcgt gttttttaca cgaacgatat ttattccaaa tcttttctgc
     1861 agagaaatga atgcaatgaa gtttgatgga taatcatttt ctgtaaccag gacaacatca
     1921 ccgtctttaa aatgcacagc agataaggcc ctgttataac tatcggtcgc gtttgtggta
     1981 taagcaatgt tccggctatt gcactttaat agctgcgccg catgatcgta gaacttactg
     2041 agttccgtcc atcttttctc tgctacctca taaccgccgc caagctcttc atctgtgaga
     2101 tacttcgtta ttgcttccac aacaggccgc ggcatcaaag ctgaacctgc attattaaaa
     2161 tgaacaatcg attcacatcc aaccgtatcc ttcctgatct tgataatatt cacttgtcac
     2221 ccgtttactt ttccctttgc tgacttactt agatgaattt caaatctgca atctgaaatc
     2281 gtaaatctga aatcgtaaat cgtaaatgcc catctcctta ctggcagtgt tcttttataa
     2341 aatccctgaa catcactcca ttttcccgca aggtgccgtc tgcattttgc agtgcaaccg
     2401 ccttgccttc gcctccatcg gcactatacc aaatagcata aggcattcct gtatcaagta
     2461 ctttttggaa tagttgctta actatttccg gcgaacgatt caattggccg aactcatttg
     2521 tgatggctgg ttttccggta gatcgtttca cataattgat cacggtttca aaaacagccg
     2581 gatcaatatt ttgaacgtct gctattccct gtggtccggc acctctggat tgggttggct
     2641 cgtaccaatg aaaatttaca tagtcaaggt ccaatgtttt atatccttca attacctgcc
     2701 ggccaaaatc aagttgcctt gccaccatgg aattcggctg gtacatctgt ttcagcctcg
     2761 atttaagtct ttccggaaac gcacgttcgg caaatgaagc cgcctctgct tttttgccgc
     2821 tgcggatcag gtcatcatat acaagtcctg cgatctcgcg gttagtgagg cccgcgttag
     2881 ccaccttaac gccatgcgca tgacaaactt cgatcgcagt ttttaattga gtcaaatatt
     2941 gttgcgcggt tcccgaatga taacctggat tgtcttcttc gttttctatc acggcaagct
     3001 caggtttgta tttatcaaga attgaattaa gcgtcttgcg atatgcttcg aggtccgtaa
     3061 cgaaagggat cggcttcttg tctccggtca catcgcgtgg tatgtcgtaa tttatgttga
     3121 gtataatctt gaagccggca gcggcatact gatcgtacgc gtcgcttgag cccttccagt
     3181 cggtcacggt gatccgggcg cggatataat ttgctcccag cgccttagcg atctgcactt
     3241 gctttccggg aggtatctgc tgatcatctg ttttggcgat cagcacgccg aacggattct
     3301 tgtgctcggc gcgtgtcttg ccaacgctga cattgcccga actgtcagct tccaacgcga
     3361 tcgaggggtc ggtttgtgat tgctgcgtcg cctgctctgt cgcggcctgt tcgccgcgtg
     3421 ccgcgctgtt ccgggaagtg ttatgacaat gataatataa tggtaacgca acgacgagaa
     3481 aaagaaaggc ctgtaatttc atacctattt tcttttgttg aacgtttaac gatagtcctc
     3541 atggttacca aacccatgcc acggacaaat attttacctg gtatttaacc tttgcaacat
     3601 gaccaaactt agtgtgaata tcaacaagct cgccacgctt cgaaacagtc gtggcggaaa
     3661 taatccaaat atagttcagg ctgctgtgga tgcacagaaa tttggcgccg atggaataac
     3721 agtacatccc cgcccggatg aaaggcatat tcgttaccag gatgtcaaag acatcaagaa
     3781 ggttatcctt acagaactaa atattgaagg caatccaact gaaaagaaat ttgttgacct
     3841 cgttttgagc acgcgccccg cacaagtgac cctcgttccc gacgcttcag gtcagatcac
     3901 aagtaatcac ggctggaata cgatcgaaca taaaaattac ctggttgata tcatcggtgt
     3961 ttttaagaaa gcaggtattc gcacttcgat atttgttgac ccggcgatcg agatgatcga
     4021 aggcgccgca gaaaccggca ccgaccgcgt tgaactatat accgagtcat atgcaaaaca
     4081 ctttaaggaa aataaagaat cggccatcat cccgtatata gctgccgctg ttgccgcgcg
     4141 tgaactcaaa ctcggattaa atgcgggcca tgatcttgac ctcgataatc ttcactatct
     4201 gatcaagaat atttcatgga tcgatgaagt aagcatcggt catgcgctta tctgcgattc
     4261 catttattta ggatttcaaa acaccataca gttgtacaaa agacagctta acttttcaga
     4321 cgttgtttaa cctctgcgct gtttatggga aacgcaaact tttacagttc ttcaaaaaat
     4381 gttcatttcg tcttgctgaa aaaaaatttt ttgcaagcgg taaaacagta tatttgaaac
     4441 aagaactaac caaagagtaa ctcatctctc cactcaattt aatttttata agctgttccg
     4501 cataggcagt ttaaaagcaa tttcgaaatg cctttttttc ctataataaa acatccaaaa
     4561 catgaaaaag aatgtactcc tctgttttac agcactcaca tttttagctg caacaacggt
     4621 tcgcgggcaa acgcttgtga agaacatgag cggcgctaat agcgacgtgt atgccgtgta
     4681 caaaaaaggg aacgcctact atattggcgg cgccttcacg tatgtaggtt taaataccgg
     4741 caatgctgct ctaacgaaaa gtaacaacga ttatccgaac atggattttc caagatttga
     4801 tggacagatc ttttcgttaa tacctgacgg tagcggcgga tggtatgccg gcggatattt
     4861 tgcgcacgtc gggggtgtgg caaaaagtaa cctcgctcat attaactcaa ataatacagt
     4921 tgacgccggc tttaccgcca atacaaacag tacggttaag acgatcgtca aggttggaac
     4981 cagactctat tttggtggcg actttaccac cgtcaacgga agcccccgac aatatgcggg
     5041 cgccgtaaac tcaagcactg gcgcactggt ggccgcatgg aatccattcc cgagcggctc
     5101 agtgtattct atagctgcgg cgcttggtgc ggatacaagc ttttggcttg gcggaagttt
     5161 tcaatatgtc aataatccgg ctattttaag gccgtatctc gcaagagtta ataataccaa
     5221 tggtgatttt ataagcggca gtctcagcgc aaattcttat acctacaaga taactactcg
     5281 cggcgactct atttttctcg gcggaagttt tacgcggctt ggtttgaaaa ctgattactt
     5341 aggaagtatc acggaaggtg ccaacgctgc cagtcaaacg atgccaaacg ccaatggcca
     5401 aataagatgc atcatccccg atggaagcgg tggttggtat gtcggcggat cattttctca
     5461 aataggtggc ataaacaaaa gcaatgtggc gcatattaat tccagtaagt cagttgacgc
     5521 gggatttacc gcggccgtta acggggcagt atatgcgctt gccaaagacg ggacgcgcct
     5581 ttatatcggc ggtgggttca gcagtgtgaa tagcacaccg agaaattatc tcgcagcagt
     5641 aaacgcaagc actggcgcaa tcgtggctgg ctgggatccc agcgcaaaca actacgttta
     5701 taaattagcg ttgaaagata caacagtgat agcggttggc gcttttacga atatcaaggg
     5761 atacaacgca tatcgcttcg ccgctcttaa taagactgac ggttcttcga tcggtggctt
     5821 cgttggttat gacaaccagg taaacagcgt tgcgctcgga ccctccgatt cactactgac
     5881 cggcggttat tacacccatg ccggatatta ttcgttgtat tcagcgaaag tgaccacgtc
     5941 aaacgtaaaa cctgatccaa aattccctgc cacaaacggt caaatatatg cggtggttaa
     6001 agacggctcc ggcaattatt acgttggagg ttcttttaac caaattggcg gagtgaacca
     6061 ggcgtatatt gctaaactta attcaaactt ccagttaatt acagcctggg caccccaggt
     6121 aaatggtgcc gtgcgctcaa taattctaaa tggcagtacg gtttatatcg gcggtcaatt
     6181 cacgcaaaca aatacagtga cgcgccaata tatgtcagcg ttgggcacag ccaatcccgg
     6241 ggcgaacaag acctggaata gttcgatgag cagctatgtg tattcgatgg tatcagacgg
     6301 gaccagcatt tatgccggtg gccttttcac aatggtaaat ggctcaactg ctcgcaattt
     6361 attggcaaaa tttgacctga acggtaacct ggatgcaacc tggaatccaa atgcaacagg
     6421 tggcggtggc acagtcgaag cgcttgcgat ctcaggaaca aatattcttg ccggtggcag
     6481 ttttacaaca gttggaggca acacaaggaa ctatctcgct aaattgaata atacaaacgg
     6541 ttcggcgagc aattgggcta cagcgaacag ttatgtttat gcactctatg tcgatgggac
     6601 cacgtgttac gcgggcggtt acttcacgca gcttacgtca gcaggtggaa ctatgacgcc
     6661 aagaaattac ctgggagcaa tcgttgttgg aactggcaac atcggcatgt ttaatccgaa
     6721 tccaagtctt tatgtttttg gaataacgga gtccggtaca aacttatatt atgctggaag
     6781 cttcacccag gttaatggca cggagagaaa gtatcttgct tcttccagca caggcggcaa
     6841 tctgcagtca tggaatccta ccgcaaattc cacagcacgt acgctcgtcg ttgatggatc
     6901 gaacatattc attggcggag actttagtgg tttccaggaa gtagaaaaac agcgggcttc
     6961 aataatcaga tataacaatc aatcgctggc aaactgggca cctgccatag ataatgtagt
     7021 ctacgatatt actgcaaatg caacc
//
LOCUS       DASQJI010000674         8088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1782383,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000674 DASQJI010000000
VERSION     DASQJI010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8088
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782383"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VEV83_18225"
     CDS             <1..322
                     /locus_tag="VEV83_18225"
                     /inference="COORDINATES: protein motif:HMM:NF014663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KipI antagonist"
                     /protein_id="HYK47122.1"
                     /translation="RLHGELLKNANGEDLLSAAVTRGTIQLLPSGQLIILMADHQTTG
                     GYPKVAHVISVDLPKLAQMHANLDLEFELVTHLEAEELFVQQQRDLRQLEQSIKIQLE
                     PYFL"
     gene            319..1059
                     /locus_tag="VEV83_18230"
     CDS             319..1059
                     /locus_tag="VEV83_18230"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HYK47123.1"
                     /translation="MIAIDLNCDMGEGMMNDEALMHFISSANIACGYHAGDEHIMKRT
                     VELALKNNVAIGAHPGFADKENFGRTEVQLSDEEYHTLVIHQLAALKKITDGAGATIH
                     HVKPHGALYNMSAKNRRIAFIIAKAVMEFDPNLILYGLSGSYSIAEARGVGLKTASEV
                     FADRSYQNNGSLTPRSQPHALIEDEGASLRQVLQMIQQQTVTSLEKITVPVVAETICI
                     HGDGTHAVEFAKRIYQTLQREMIAIRSC"
     gene            complement(1209..2264)
                     /locus_tag="VEV83_18235"
     CDS             complement(1209..2264)
                     /locus_tag="VEV83_18235"
                     /inference="COORDINATES: protein motif:HMM:NF014345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HYK47124.1"
                     /translation="MKKIITVLAFIALVCSAFACTTFCINKDGQIIFGRNYDWVSGAG
                     IVNTNLRGLFKTSMHTGDGKTISWVSKYGSITFNQYGKEFPTGGMNETGLVVELMWLD
                     GTRYPKKDQRPSVGVLQWIQYQLDNCESVEQVIKTDAVLRINGDGTPLHYLVADAHGN
                     TATVEFLNGKMVVHTGSTLPFPVLTNDTYTESLEAENHFLRHSNEAALSSNSRDRFVK
                     ACTLLQQVDAHTLNTPLIDFAFSILDKVAQGSFTKWSIVYDITHKEIHFKTESNSDVK
                     IIRFNGFDFSCSSSPEVFDMNQSGKGDVTKSFTNFNDTLQVRVITQAIEESRGNVSIG
                     DEEKREILNYTAGIKCN"
     gene            complement(2334..2810)
                     /locus_tag="VEV83_18240"
     CDS             complement(2334..2810)
                     /locus_tag="VEV83_18240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47125.1"
                     /translation="MRPASINEIKQELSSLQQKRLIELCLRLAKYKKENKELLTYLLF
                     EQQDEQAFVDIVNKETDEKFSELPKATTYLTTKALRKIVRIITKYSRYMDSKESEIEM
                     RIHFCDRLKDSGIRIQKDKAIFNLYTRQLLKLNELKKSLHEDLAFDYGKRIDQLLI"
     gene            complement(2886..3971)
                     /locus_tag="VEV83_18245"
     CDS             complement(2886..3971)
                     /locus_tag="VEV83_18245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47126.1"
                     /translation="MTEKKRIRTGLVGFGVAAKFMHAPFLLTNDGYEVVAVLERHKEE
                     SKQLFPGAVLVRSIDELLDVNDLDLVVITTPNDTHFSYAMQSMLAGKHAVVDKPFTIT
                     SEDALQLIEVAKGSSNILSVFQNRRYVSDALTIKELLSKNLLGTVHEFEGHYDRYRPE
                     PRPGAWREEPQPGSGILYDLGSHLIDQGLVLFGLPKTITADIRMQRPHARADDYFDIR
                     LDYGFLKVILKAGMLVREPGPRYQIHGTKGSFIKYGEDPQEVLLRAGVLPTAPDWGVE
                     KEELHGLLHTEVDGKIIKQKYPSVKGNYGYYYENLYNSIINKMPVREKPEHGYNTIKL
                     IELAFQSHNSKSTVECAGLIDADYPGD"
     gene            complement(4161..5663)
                     /locus_tag="VEV83_18250"
     CDS             complement(4161..5663)
                     /locus_tag="VEV83_18250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK47127.1"
                     /translation="MELRHSTHLSEQQVQAGLKLVIKDGLATEAMTTLTGGAFLVSMA
                     LLMGASNFQIGVLAALPTFTNIFQLLSIWLVRKYRSRRAIAVICAMLARFPLLLIGTL
                     PLLFSSSTTIQALIFFLFFFYFFGSIAGPTWNAWMKDLVPEKILGAYFSRRSRLTQTL
                     NVVMSLLVAITIDFVKRNYPAAELITYACMFITGGVIGLCSAYFLSRTPEPQSGLTNG
                     NILRLFKKPLQDRNFRNLLVFNSAWVFAINLATPFFIVYMMKTIGLPLSYVIGLGILS
                     QLSSIVSLKLWGGYADNYSNKTIIAIGAPLYVVCIVGWCFVGQSANFSANIILLSVIN
                     IITGFATAGINLALTNIGLKLAPKQDAIVYLSAKNIVTALFSSLAPLFGGWLADILVR
                     SQFNWTMKWGTTAGLKEFHLIALGQWNFLFLIGALLALISIKLLKRVQETGEVEKTFV
                     VKVLRSDLRNSLKENFVVSYLINWPVTVSARIKKLSSSSDKSKAEETKRA"
     gene            complement(5906..7336)
                     /locus_tag="VEV83_18255"
     CDS             complement(5906..7336)
                     /locus_tag="VEV83_18255"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HYK47128.1"
                     /translation="MQYNEFREAGHYLIDYIANYLEHSKEKPLFTDAEPSFLYELFNE
                     PVPENARALKDIQQILEEKLLPYCTDLSHPGYMGLITPSPNPAGILGDLLAAALNQNL
                     GVYTIGPSAVTMELRVIRWLNDLIGYDEHAGGNLTSGGMTANFIGLKLARDFSTCDAS
                     QHEGIKGKWAVYVSEERHVSIDKSVDAVGVGRNNLRALPTDENFQLRIDALEEAIQKD
                     KADGIQPLCIVGLAGTTNLGAVDDLETLRHIADREHCWYHIDAAYGGGLLLSEKHKNV
                     LKGLHLGDSVTIDPHKWFYAPLDCGAVLVKDHARLRTSFGMQPAYLTEQGEKKNERYQ
                     FYVNGFEQSKRFRSLKVWMSFQHYGRQQIAQWVENNIEQATHLHKLAQNTDDFESATE
                     PKMSAICLRYKGDRMGSDAIKQLHYSVAARIEKEGRFWFATTVLKGCTWFRINPVNIH
                     TTLNTMDELFQTLQKYCKEEALKHSH"
     gene            7503..7799
                     /gene="trxA"
                     /locus_tag="VEV83_18260"
     CDS             7503..7799
                     /gene="trxA"
                     /locus_tag="VEV83_18260"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HYK47129.1"
                     /translation="MESFQELIQSEQPVLVDFYADWCGPCKAMEPVVKEVAKAVQGKA
                     RVVKVDIDKRVQLAQAYNVQAVPTFMIFKSGNVIWRHPGMIDKNTMLSKLMQSA"
BASE COUNT         2230 a         1781 c         1787 g         2290 t
ORIGIN      
        1 tagattacac ggtgaactgt tgaaaaatgc gaacggagag gatcttttgt ctgcggcggt
       61 aacgagaggg acgattcaat tattgccgtc gggacaattg ataattctaa tggccgatca
      121 tcaaactacg ggcggttatc ctaaggtcgc acatgtcatc agcgttgatc ttccgaagct
      181 cgcacaaatg cacgcaaatc tcgatcttga atttgagctg gtaacgcatt tggaggccga
      241 ggaacttttc gtgcaacaac aacgcgattt acggcaattg gagcagtcaa ttaaaataca
      301 gctggagcca tattttttat gatagcaatc gaccttaatt gcgacatggg tgaaggcatg
      361 atgaacgatg aggcattgat gcacttcatc agttcagcga atattgcttg cggctatcat
      421 gcaggtgacg aacatatcat gaaaagaaca gtggagcttg cgttgaaaaa caatgtcgcc
      481 attggagcac atcccggctt tgccgacaaa gaaaattttg gtcgtaccga agtacagttg
      541 tcggatgagg agtatcatac acttgtgatc catcagcttg ccgcgttaaa aaaaatcacc
      601 gacggtgctg gcgcaacaat tcaccatgtg aaaccacacg gcgcgctgta caatatgtct
      661 gcaaagaaca ggcgcattgc gttcatcatt gcaaaagcag taatggaatt tgatccgaat
      721 ttaattctct acggtttgag cggcagttat tctattgcgg aagcacgcgg cgtgggtttg
      781 aaaacagcga gtgaagtttt tgctgaccgt agctatcaaa ataacggcag cctaacgccg
      841 cgttcgcagc cacatgcgtt gatcgaagat gaaggcgctt cattacgaca agtgctgcaa
      901 atgatacaac agcaaacagt aacctctttg gaaaagataa ccgtaccagt cgttgctgaa
      961 acaatttgca ttcacggtga tggaactcat gcggtagaat tcgcaaaacg tatttaccaa
     1021 actttgcaac gggaaatgat cgcgatcaga tcgtgttgaa ggggtagaca cttttaagcg
     1081 gagatatgga gcacaacgga cacgaaggat atacaacggg cacaatgtta aacaggccgg
     1141 tcgtagtgtc ctttgtgcgc atcttcgtgt ccgtcgtgtt acaaaaaaat cttttcttgc
     1201 aaaggccgtt agttgcactt tatacccgca gtgtaattca gtatctctct cttttcctca
     1261 tcaccaatag aaacattacc ccggctttct tcgatcgctt gggtgataac tcttacttgt
     1321 agtgtatcat tgaaatttgt aaagcttttc gtcacatctc ccttgccgga ctggttcatg
     1381 tcaaagacct ccggagatga tgagcaggaa aagtcaaatc cgttaaaccg gatgattttg
     1441 acatcgctgt tgctttcagt tttaaaatga atttctttat gcgtgatatc gtaaactata
     1501 ctccactttg taaaactgcc ttgagcgacc ttatcaagta ttgaaaaagc aaagtcaata
     1561 aggggcgtat ttagcgtatg cgcgtctact tgctgtaaca gcgtacacgc cttcacgaaa
     1621 cggtcccgtg aattactgct cagtgccgct tcattgctgt gcctgaggaa atgattttct
     1681 gcttctagag attcggtata cgtgtcgttc gtgagcacgg ggaagggcaa cgtgctaccg
     1741 gtatgaacga ccatttttcc attgaggaac tcgactgttg cggtgttacc atgcgcatct
     1801 gcaacgaggt aatgcaacgg agtgccatcg ccgtttatcc gaaggacagc atcagttttg
     1861 atcacttgtt caacactctc acaattatca agctggtatt ggatccattg taaaacacca
     1921 actgaaggcc tctgatcttt tttcggataa cgcgttccgt cgagccacat caactcaacc
     1981 accaggccgg tttcgttcat gcccccggtt ggaaattctt taccatattg attgaacgta
     2041 atgctgccgt atttcgatac ccaacttatc gtttttccat cgcctgtatg cattgatgtt
     2101 ttgaaaagcc cgcgcaggtt tgtatttacg atgccggcgc cagagaccca atcatagttt
     2161 cggccgaaaa tgatctgccc gtctttattg atgcaaaatg ttgtgcaggc aaaagcagag
     2221 caaacaagcg caatgaatgc aagaaccgta attatttttt tcatcgatct caaaactaaa
     2281 tgtaacacgg caagaaggcg gatgcaattt tgatggttgg tcgaagagat ttgttaaatc
     2341 aataattggt ctattcgttt tccataatcg aatgccaggt cttcatgcag tgatttctta
     2401 agttcattca attttagcaa ctggcgagtg tataaattaa agatcgcttt gtctttttga
     2461 atgcgaatcc ccgaatcctt caggcgatcg caaaaatgga tccgcatttc aatttcactt
     2521 tcttttgaat ccatatacct gctatacttt gtgatgatcc gcactatttt tcgaagagct
     2581 ttcgtggtta gataggttgt cgcttttggc agctcgctga atttttcgtc ggtttctttg
     2641 ttcactatat cgacaaatgc ctgttcatcc tgttgttcaa acaaaagata agtaagcagt
     2701 tctttatttt cttttttgta cttcgccagt cgaaggcata attcgatcaa ccgcttctgc
     2761 tgaagcgaac tgagctcctg ttttatttca ttgatgctcg ccggacgcat ggaaatttag
     2821 gattttcgat ttacgatttg ggagttacga ttgcagattc acaattgaca attcacaatt
     2881 cacattcaat cccccggata atccgcatca atcaaacctg cgcactcgac agtgctttta
     2941 ctgttgtgac tttgaaaggc aagttctata agctttattg tgttgtaacc gtgctcaggt
     3001 ttctcacgaa ccggcatttt gtttatgatg ctgttgtaaa ggttttcata gtaatagccg
     3061 taattgcctt tgacggaagg atatttttgt ttgataattt ttccgtctac ttcagtatgc
     3121 aataatccat gcagttcttc tttttccaca ccccagtccg gcgccgttgg taaaacgcct
     3181 gcccgcaaca aaacttcctg cgggtcttcg ccatatttta tgaacgaacc ttttgttccg
     3241 tgaatttggt aacgcggccc cggttcacgc acgagcatgc cagctttcag aatgaccttt
     3301 aagaacccat aatcgagtcg aatgtcaaaa tagtcatccg cgcgtgcatg cggccgctgc
     3361 atgcgtatgt cagcggtgat cgttttcggc agtccaaaca acaccaaacc ctggtcgatg
     3421 agatgagagc caagatcata caagatgcca cttcccggtt gtggctcttc gcgccatgcg
     3481 cccggcctcg gctccggacg ataacggtcg taatgccctt cgaattcatg cacagtcccg
     3541 agcaagttct tactcagtag ttcttttata gtaagcgcgt cggacacata cctgcgattt
     3601 tgaaaaacgc tcaaaatgtt tgatgaacct tttgctactt caatcagttg caacgcatcc
     3661 tcactcgtta tcgtaaaagg tttgtcaacg accgcatgtt taccggccag catgctctgc
     3721 atcgcgtaag agaaatgcgt gtcattcggc gtcgtgataa caacgaggtc aagatcattc
     3781 acgtctaaga gctcatcaat gcttcgcacg agaactgcac cagggaacaa ttgttttgac
     3841 tcctctttat gacgttcgag tacagcaact acttcatagc cgtcgttggt gagaagaaaa
     3901 ggcgcatgca taaatttggc agccacacca aaaccgacca acccggttcg tattcttttc
     3961 ttttcagtca ttatttaaaa aatattgctg aaagatatta caatcatgga agtcggtaaa
     4021 ccgtattgat agaaccagct atctcttggc tgcacggcgt gcaatttgtt ctcaaccgta
     4081 cgaggtgcac ggtaaccaat agtcttaact atcgggctga tcaaatagat aaaaggaagg
     4141 aatacgatct gacaggaaga ttatgctctc tttgtttcct ccgctttgga tttatcggag
     4201 cttgatgata gttttttgat acgggccgag acagtaaccg gccagttgat caggtagctg
     4261 acaacaaaat tttccttcaa actatttcta agatcactgc gcagaacttt taccacgaaa
     4321 gttttctcca cttctccggt ttcctgtacg cgcttcagca atttgatcga aatcaaagca
     4381 agcagcgcgc cgatcaggaa cagaaaattc cattggccta acgcgatcaa atggaattct
     4441 tttaggcctg ccgttgtgcc ccatttcatt gtccagttaa attggctcct tacaagaatg
     4501 tcagcaagcc atccgccgaa aagtggagcg agagatgaaa ataatgccgt aacgatattt
     4561 tttgcggaca ggtatacaat ggcatcttgc ttcggggcaa gcttgaggcc tatgttggta
     4621 agcgctagat ttatgccagc cgtagcaaaa ccagtgatga tgttgataac cgacaacaaa
     4681 ataatattcg cagaaaagtt tgcagattga ccaacaaaac accaaccaac gatgcaaact
     4741 acgtacaaag gcgcgccgat cgctatgatc gttttattgc tgtaattatc cgcatatccc
     4801 ccccataatt taagagatac aatactgctc aactgggaca gaatgccgag gccaattacg
     4861 taagatagag gcaacccgat cgtcttcatc atatacacaa taaagaaagg tgtggccagg
     4921 tttatggcaa atacccatgc ggaattaaac accaacagat ttcggaagtt ccgatcttgt
     4981 aacggctttt tgaatagcct taaaatattt ccatttgtta aaccagattg tggttcgggc
     5041 gtgcgtgata aaaaataagc gctgcaaagt cctatcacac cgcccgtaat aaacatgcac
     5101 gcataggtga tcaattctgc cgcaggatag tttctcttta caaagtcgat tgttatagca
     5161 acgagcaaac tcatcaccac atttagtgtt tgtgtaagcc tgcttctccg ggaaaagtaa
     5221 gcccccagta ttttttccgg cacaaggtct ttcatccacg cgttccaggt tggacccgca
     5281 atggacccaa aaaaatagaa aaagaaaagg aagaatataa gagcctggat cgttgtggat
     5341 gagctgaaga gcagcggcag cgtgcctatt aacaatagag gaaagcgtgc gagcatggcg
     5401 cagataactg caattgcccg gcggctgcga tatttcctca ccagccaaat cgatagaagt
     5461 tgaaagatgt ttgtgaatgt tggcaatgca gcgagaacac cgatctggaa attcgatgcg
     5521 cccataagca acgccattga gacgaggaac gcgccaccgg tgagtgtggt catcgcttca
     5581 gtagcaaggc cgtctttgat aacaagtttt aagccggctt gcacctgttg ctcgcttaag
     5641 tgtgtactgt gacgtagctc catcaaatat gtaatgacac accactccga aatatcaaga
     5701 agacaaggtg atgcttctta taacattttc tgagatgggt atagaaaaat tatagtttaa
     5761 aaagtagatg tagtttgaaa gccggcctga tattttggtt taattctgat attgttgtac
     5821 aaagttaata tttatcaaac cctgcaagcg gccgacagta aaaagttgtg cacccaaaat
     5881 tcaccggcat gtgcaggaga ggtaatcagt gggagtgctt caacgcctct tccttgcaat
     5941 atttctgtag cgtttgaaat agttcatcca ttgtgttgag cgttgtatga atatttaccg
     6001 ggttaatacg aaaccatgtg cagcctttca atacagtggt cgcaaaccaa aaacgtcctt
     6061 ctttttctat ccgtgcggca acggagtagt gaagttgctt gatcgcatcg ctgcccatcc
     6121 ggtcaccttt gtatcgaagg cagatagcag acattttcgg ttcagtggcg ctttcaaaat
     6181 catctgtgtt ttgagcgagc ttatgcaagt gcgtggcctg ttcaatatta ttttcaaccc
     6241 attgtgcgat ctgttgcctg ccataatgct gaaaactcat ccacacttta aggctgcgaa
     6301 accgctttga ctgttcaaag ccatttacat aaaattgata gcgctcattt ttcttttcgc
     6361 cctgttcagt tagataagcg ggctgcatgc caaacgatgt tctcaatctt gcatgatctt
     6421 tcacaagcac ggcgccgcaa tcaagtgggg cgtaaaacca tttatgcggg tcgatggtca
     6481 cagaatcacc cagatgcaat cccttcaaaa catttttatg cttttcggaa agcaataacc
     6541 cgccgccgta tgcggcatca atatgatacc agcaatgttc ccggtctgcg atatgtcgca
     6601 atgtttcaag atcgtcgaca gcgccaagat tagttgtacc cgcgagacct acaatgcaca
     6661 aaggttgtat gccatcggcc ttgtcttttt gaattgcttc ttccagcgcg tcgatgcgta
     6721 attgaaaatt ttcatcggtt ggtaatgcgc gcaaattatt acgaccgaca ccaacagcat
     6781 ccaccgactt gtcgatggag acgtgccgtt cttccgaaac atatactgcc cattttcctt
     6841 ttatgccttc atgttgagac gcatcgcatg ttgaaaaatc tcttgccagc ttaagcccaa
     6901 taaagtttgc agtcatccct ccgcttgtta aattaccacc ggcatgttcg tcatatccaa
     6961 ttaagtcatt caaccaccga ataacgcgaa gttccatggt aactgcagaa ggtccgatcg
     7021 tgtaaacacc aaggttctgg ttaagtgcgg cagccagaag atctcctaat atgcccgccg
     7081 gatttggcga cggtgtaatc aaccccatgt atcccggatg actgagatcg gtacaatacg
     7141 gcagtaattt ttcctcgagg atctgttgaa tatctttaag tgcccgtgcg ttttcaggaa
     7201 caggttcatt aaacaattca taaagaaatg acggttcagc atccgtgaac agaggttttt
     7261 cttttgaatg ttccaggtaa ttggcaatgt agtcgattag ataatggcct gcttcgcgaa
     7321 attcgttgta ttgcatggag tgaatgcgtt tgattttgtc attaaagaga acacaaatat
     7381 ggtttttagt gaaatgattg caggataaat ttttcgtgca tttcgatttt gtcaacttta
     7441 gcagatcaac gtgatttttt tccaaactgc acaattattg cagtaaaaca aaaaagaaaa
     7501 acatggaatc cttccaggaa cttatacagt cagaacaacc ggtgttggta gatttttacg
     7561 cggattggtg cggtccctgc aaagcaatgg agcctgttgt taaggaagtt gcaaaggcgg
     7621 tgcagggaaa ggcaagagtt gtaaaagtcg atattgataa acgggtgcag ttggcgcaag
     7681 cttacaacgt gcaggcagtg cctactttta tgatttttaa gagcggaaac gtgatctggc
     7741 ggcatccggg aatgatagat aagaatacga tgctctcaaa attgatgcaa agcgcctgac
     7801 cggttgtatg tgaatgtctc acaaccgggt tgcgctcatt ctctcacact ctgttcaaag
     7861 aatattacgg tgtatgtgct gcatagcgct gacgcagcag tcacacattt ttgcacagcg
     7921 gacgacggaa gctttttagg catgtggagg gtgtaaactt tcctttatta tatttgtgca
     7981 ccttcagctg caaataaagc cttgacgttt atgagatatt tattggtcct tgtccttttt
     8041 gtgagtgtat ttcattccga tgtattttct caaaagaaat cgccaata
//
LOCUS       DASQJI010000675        27928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1319043,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000675 DASQJI010000000
VERSION     DASQJI010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 27928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27928
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319043"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(290..505)
                     /locus_tag="VEV83_18265"
     CDS             complement(290..505)
                     /locus_tag="VEV83_18265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47130.1"
                     /translation="MKGLAIALIIIGIVMMVFRSINFTHEEKVVDVGPLEVNKKENHT
                     VNWPLFAGIAVTAAGVVILVTSNKRKA"
     gene            complement(512..1051)
                     /locus_tag="VEV83_18270"
     CDS             complement(512..1051)
                     /locus_tag="VEV83_18270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47131.1"
                     /translation="MAIDLIEEVRNQLGYKPLPKINPNTQEPVSDQIPDIGSAAIPAV
                     LAGFYKRTRSVETAEKLINTPGDNMLDELFCEHTNDVIQSVAGYSRVSAEAARSEMQN
                     VVDAVDHLLGQHLKDKTGSNVMTFFTTQRSNILKHLPVELHMGELINDPAMDDRTNKM
                     EGPMSGFMHTIEQIFSSSK"
     gene            complement(1172..1621)
                     /locus_tag="VEV83_18275"
     CDS             complement(1172..1621)
                     /locus_tag="VEV83_18275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47132.1"
                     /translation="MFSNSLFEKLDLREEKNLLIQGLPSSIEKQFAKLSYAKNVTPLL
                     RTRKIDFALVFAVNHNQLTNILQEVFPALNSKSKLWIAYPKVTSKIASDLNRHSSWQF
                     LSESEYEAVNQVPLDHVWTAMLFKKASLENGPDLLKVKSKSILTEAD"
     gene            complement(1772..2341)
                     /locus_tag="VEV83_18280"
     CDS             complement(1772..2341)
                     /locus_tag="VEV83_18280"
                     /inference="COORDINATES: protein motif:HMM:NF019237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1566 domain-containing protein"
                     /protein_id="HYK47133.1"
                     /translation="MTKEITVALAAISLLMSCEKQTVENRTPATRSADNSVAIKYHVG
                     DTVGGGIVFYVDSTKLHGLVAAFKNQGQTTWDNDSFVVTGATGTAIGTGALNTKKIIS
                     IQKIGPYAATLCTSYRGGGYADWFLPSKDELAKLYLNKSAFTGFTQFYYWSSTEVDST
                     KAWAQSFYNGSQTKKSKGGRFYVRAVRAF"
     gene            2849..3859
                     /locus_tag="VEV83_18285"
     CDS             2849..3859
                     /locus_tag="VEV83_18285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47134.1"
                     /translation="MKTSKLLAIVVLLFATCTKDSSDATKSGAIEKSIIGSTATDTVK
                     IAINDLGTRTYLGMVGGLYPGGKNSPSLQYKKDLKKFANAIKPLNTAGVIDSISGKIV
                     FIGLGGSTAGHMMRVLREMTINDTATNRFLKLVNATYGGGIASFQSIANPTDVYWDTV
                     FNALAATSSTGDQVEILYVESEDSSQVVAFPDRPYIAKNDIEAAVRTCKTKFRNLKFV
                     YFLGRTTTFDSFGLSQVTNREPCPYYNGWATKFAIQDQINGVPGTEYKGDTAVAPLMT
                     WGWYQWADGTDVPRQDGFTWQPSNTKDGLHANDDGEDTLATRFKNFLMTDRFASIWYK
                     KH"
     gene            complement(4028..4101)
                     /locus_tag="VEV83_18290"
     tRNA            complement(4028..4101)
                     /locus_tag="VEV83_18290"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4065..4067),aa:Ile,seq:cat)
     gene            4194..4808
                     /locus_tag="VEV83_18295"
     CDS             4194..4808
                     /locus_tag="VEV83_18295"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HYK47135.1"
                     /translation="MIKIKNIIFDLGGVILNIDLKRTELAFAELGVGNFKEYYTLQTA
                     TPLFEDLELGHITPKNFYDEFRKLAKLPLTDEQIRTAWNRLLVNFPVETIDWLKNIKS
                     KYNIFLLSNTNEIHYEAFTKMFEEEIGVGKLDDQFVSAYYSFRIGLRKPSKESYEEIL
                     KTEELTAAETLFIDDSMQNIQGAASVGLQTRYLPSPHTVMELHL"
     gene            complement(4814..5032)
                     /locus_tag="VEV83_18300"
     CDS             complement(4814..5032)
                     /locus_tag="VEV83_18300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47136.1"
                     /translation="MIEWIFTVLVLYLLYKLIFDFILPVSKASAQMRNKINEMNNRQQ
                     QNANQQQPDREAKSRPPKEDYIDFEEIK"
     gene            5213..5665
                     /locus_tag="VEV83_18305"
     CDS             5213..5665
                     /locus_tag="VEV83_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor"
                     /protein_id="HYK47137.1"
                     /translation="MDTIEKLVNEVLSQEKEYFLVEVKIKPTNNIKLYVDGDHGISIE
                     KCVQFNRSIYKKISAADLFPAGDFSLEVSSPGVEKPLRSQRQYLKNIGRNVQVVFNDA
                     SEKIGKLTEVTDADIILEESVGKGKKAEVHQVVIPFSNIKTTTVQIQF"
     gene            5716..6963
                     /gene="nusA"
                     /locus_tag="VEV83_18310"
     CDS             5716..6963
                     /gene="nusA"
                     /locus_tag="VEV83_18310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HYK47138.1"
                     /translation="MASINLIEAFQEFKEAENIDRPTMMKVVEDVFKTLLRKKFGSDE
                     NFDVIVNAEKGDLEIFRRRMIVEDGEVQNPLAEIGYTDATRIEPDFEIGEELYEEVDM
                     YDFGRRAILAAKQTLASRISDLKKNVLVKKYSDRVGEIINAEVYQVWKKEVLLMDEEG
                     NELILPKSEQIPQDYFKKGESIRAVVKKVDLKNSSPVIILSRTSPDFLAKLLEIEVPE
                     IFDGLITIRKIVREPGERAKVAVESFDDRIDPVGACVGMKGSRIHGIVRELKNENIDV
                     INWTNNVQLLIQRSLTPSKISYMDLDNENKHADVYLKADQVSLAIGRRGVNIKLACEL
                     TGYDIDVFRESEGEAEEYDIDLDEFSDEIDTWVIDELKRVGCDTARSVMDLSAEELER
                     RTDLEKETIADVKKILKAEFERE"
     gene            7045..9873
                     /gene="infB"
                     /locus_tag="VEV83_18315"
     CDS             7045..9873
                     /gene="infB"
                     /locus_tag="VEV83_18315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HYK47139.1"
                     /translation="MAELKLPRLLGAAKEFNIGQDTLIEFLVSKGFDRDELKPTAKIS
                     EDMYQALQQNFQSDKVAKTKADQVEIPKTTATEKRRKEDEEISFRREEPKVPVEVPPV
                     KIADKNGTEVKPELPKPVETQPEVAKAEIVEPEMVKIEAPEIEGPKVLDKIDLSGIDS
                     STRPKKTEKKPKVQSKEVAPSPFLEEPVPQEEVAESTESTAETDAPAVIENIKAEKIE
                     GPKVLGKIELPVETDTRPKTPVAREEKRKRKRIPIDKKGTDTAERRPVIQPQQRQGAG
                     PFRRDGAPGDRRGPTRGPGHRGDRRLPDREIDQKEIQEKIRQTQAKLAGSTGRGRSLK
                     AKHRREKRHEMSETSDVGDSNVLQVTEFVTVSDLANLMSVSFAEIISKCMSLGIMVSI
                     NQRLDAEVIELVAGEFGYEVEFMGLEEVEDEDDEMEDDADELQPRAPIVTIMGHVDHG
                     KTSLLDYIRSANVVAGEAGGITQHIGAYQVTIGENKKITFLDTPGHEAFTAMRARGAK
                     AADIAVIVIAADDAVMPQTKEAISHAQAASLPMIFAINKIDKEGANAKKIYEQLSQMN
                     ILVEEWGGKYQSQEISAKKGLNVDLLLEKILLESDLLDLKANPDREGTGTIIEASLDK
                     GRGYVATVLVQNGTLKQGDLMVSGQYFGRLKAMSNERNQRVVEAPPACPVQILGLNGA
                     PQAGEKFKVYDDEAEAKEVANRRAQILREQGLRTRKHITLDEIGRRLALGNFKELKMI
                     IKGDVDGSVEALSDSLQKLSTEEIVVSVVHKAVGQISESDVLLATASDAIIVGFNVRA
                     SSQASRLAETEGVQIKTYSIIYNAIEEVKSAMEGMLEPKVEEKEVATVEIREVFKFDK
                     ATVAGCYVTDGKVKRDSKVRLFRDGILIYPRQEGAFAELASLKRFKDDVKEVASGYEC
                     GLTIRNFADVNTGDTIVAYEEEEVKRTL"
     gene            9992..11371
                     /locus_tag="VEV83_18320"
     CDS             9992..11371
                     /locus_tag="VEV83_18320"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK47140.1"
                     /translation="MKIFLSFLLFFISFGIFKTFGQSQKIVADQIIAKVGDKIILKSD
                     IDNAISDYKRQGEIQLPPHPECAFLQGQLVQKVLVLQAEKDSILVSDDDIDALLDNQI
                     RYFINQYGSQDVLEQIAGKTVYQLKEDLRQPFTERQLADKMRNKILENVKITPNEVKT
                     YYDKIPKDSLSFYESELEVGQIVIYPKANKDLEDYITAQMLEWKKEVESGQKKFADLA
                     RLYTDDPGSKDNGGQYSLNRNDKNWDPTFLAAAFKLKEGQISPVIKSKFGLHIIQMVS
                     RAGDDAVVRHILKIPSVTNGEITTAKSKLDSIRSKIIAGTVSFNEAVNKYSEDDYSKY
                     TAGRIVSPTTGSTPVTIDQLDKDLVVNLKSMKVGDISQPLVYTDERQKTAVRIVYLIS
                     QTQPHRENLKDDYDKVAQRALNEKKQGVLDSWFRQHISDFYIDINDQYKSCPGLSEWW
                     NAADHTASR"
     gene            11437..11931
                     /locus_tag="VEV83_18325"
     CDS             11437..11931
                     /locus_tag="VEV83_18325"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HYK47141.1"
                     /translation="MYVHIFAEDFDSMKLEQAIKSSKFRNEVHKAGLNILYTAWWLKT
                     MMSRELKEYGLTHEQYNVLRILKGKHPEQICVKEIACRMIEKNSNVPRIIDRLEAKKL
                     VRRTSSNTDKRETVIVLTQAGLNILQHSTDRINKLMDKSIVLDERKASTLNDILEEIR
                     KQEQ"
     gene            11977..12846
                     /locus_tag="VEV83_18330"
     CDS             11977..12846
                     /locus_tag="VEV83_18330"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HYK47142.1"
                     /translation="MKYRNIKEILYGRQFNMAGMPIRQPIPSAGIQQVDPFLLLHHAE
                     VTVPTHTVVDKAGVGPHPHRGFSPVTLIFKGGVHHRDSRGNDNVVYAGGTQWMNAGMG
                     IVHSERPPADIFERGGIQEIIQLWINTPAKHKMDQPSYFPLTAEGTPAYKSDDELVSI
                     KVVAGELEDLTGPIPSFSPINAYTAEFGKGGKYIFNIPASHNLFIYLLDGKLKINEET
                     EIEGKNAVVFENDGDGFKVEALEDTRFFIGSGEPLNEPVASHGPFVMNNQTEILQAFR
                     DYQIGKMGILIEE"
     gene            12877..13443
                     /locus_tag="VEV83_18335"
     CDS             12877..13443
                     /locus_tag="VEV83_18335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK47143.1"
                     /translation="MATYKIDSAHSEITFKVRHLMISNVTGHFTKFDATMVCKNDDFT
                     DASVSFETDVASVTTNQEQRDVHLMSDDFFNAEKFPKITFRSTSVEKKSDEEYILHGD
                     LTIRDVTKNIPLKVEYNGQVKDPWGQEKLGFELKGKISRKEFGLKWNAVTEAGGVVAG
                     DEVRLLINVQMIKQAEAQPAELAEKESQ"
     gene            13440..14003
                     /locus_tag="VEV83_18340"
     CDS             13440..14003
                     /locus_tag="VEV83_18340"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HYK47144.1"
                     /translation="MNIEIISGSPRKDSVTHRMVLFLQKYLQENSPHNISVIDVRDWD
                     IDVLQQEVYRTADIAPVRLKPLAQRMFAANAFILVTPEYNGSYTPALKNLFDHFPKQS
                     HKSFGIVTASPGALGGIRASQQLQLLINALFGIASPHMLITPHVDKKFDTSGKLIESS
                     FQNNVDVFVKEFLWLAEHVAAELQHSA"
     gene            14049..15896
                     /locus_tag="VEV83_18345"
     CDS             14049..15896
                     /locus_tag="VEV83_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HYK47145.1"
                     /translation="MSDEIKHECGLAFIRLRKPFSYYLQQYGTVMYGLNKLYLLMEKQ
                     HNRGQDGAGIAAVKLNTEPGNPFLHRLRSNAPQPIAELFFKIGSEINELEKYQPDIKK
                     HPGLMKGHVPFMGELLLGHLRYGTQGKNNVEFCHPFIKRDLVPGKNLALAGNFNLVNK
                     DELFDLVNINPGDFQKQSDLAAMMEVIHHFLSIEDERSPNNADISAALRKAAVLFDGG
                     YTVGGLVGNGSSFVLRDPHGIRPAYYYANDEVIVAASERAAIRTSFNIGENEVCELMP
                     GTALIVDSEGKFSINEILPPKERKACSFERIYFSRGSDEKIYRERIALGHHLSRAVLE
                     AVDYDLKNTIFSYIPNTAEVAYFGLCKGMEEYLNEIKVQRILSWGNDITEEKLHAMIN
                     RTIRQEKIAIKDVKLRTFITEDSGRNEMVQHVYDITYGTVRRGEDTLVVIDDSIVRGT
                     TLKESIVRMLARLEPKKIIVVSSAPQIRYPDCYGIDMSKLGDFIAFRAAIELLKERNL
                     HCVIKDVHEKILELQRCNQLHTENLVRYIYKPFTTEELSDKIANLITPKNLTIPVQVI
                     YQTIEDLHESCPTNTGDWYFTGNYPTPGGNRVVNKAFLNFIEGKDVRGY"
     gene            15969..16496
                     /locus_tag="VEV83_18350"
     CDS             15969..16496
                     /locus_tag="VEV83_18350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HYK47146.1"
                     /translation="MAKNEETKQDGFRQLLLVRHAKSSWADVTQQDFDRPLNDRGEKD
                     APEMARRVAKRDVSIDAFISSPAKRAFATARYFAKEFGVKKKKIIKVPELYEASVNDF
                     YNAVEQTNDDYTTIALFSHNPGVTAFANGLTSTHVDDMPTCGIFAIRVQADTWKNFKD
                     APKEFWFFDYPKNIS"
     gene            complement(16489..17379)
                     /locus_tag="VEV83_18355"
     CDS             complement(16489..17379)
                     /locus_tag="VEV83_18355"
                     /inference="COORDINATES: protein motif:HMM:NF017807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HYK47147.1"
                     /translation="MTRQVKAHAAVLLANIFFAISYIAIKYVVPGKLPAPALNLIRVV
                     GSVILFWLLFLLKPSRAGIERKDIPSFFICALTGVTLNQILFVKGLSLTSAIHASLLA
                     LVTPILIIFFAAWFLKERLTWIKIAGIAMGIGGAVILILMKDVSHTATNIVLGDVLVI
                     LNAVSYAFYFVFVKPLMRKYSAIHIIRWVFTIGLLFMLPYGWTSVATTNWETFQFMHW
                     LTVAFIIICATFLAYLCNIFGVSAIGASATGSYIYTQPVFTAILAIIFTGETLDWLKF
                     LAAVLIFCGVYLANFKAKLS"
     gene            complement(17407..18627)
                     /locus_tag="VEV83_18360"
     CDS             complement(17407..18627)
                     /locus_tag="VEV83_18360"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK47148.1"
                     /translation="MLALQELITTITLNNTRKRPKFSFRFIILWFLNYGDFTLLKKYF
                     LNAEFHSKRILIAPLDWGLGHAVRCIPIIRYLLELGCQVNIAATGNQKTLLQNEFPDL
                     SFLELPGYNVTYSKSKRRMPLKILVQIPKILKIIRTERKWLETAVEKEHFDVVISDNR
                     YGFDNEKTHSVFITHQLQVKSRFSFLETLLRKISYRYINKFSECWVLDLEGKFNIAGA
                     LSHPVSLPSIPVKYIGPVSRFRKIEQMQSRYKWMVIISGPEPQRTLFEEKILTAARSM
                     EDSFLIIRGMPDESKPFLHLPNCTLFNHLSTHELEESISSSDFIISRCGYTTLMEMLS
                     LQKRSVLIPTPGQTEQEYLGRHVMEQHWCYSFTQNQNFAEHLKKAEVFTFDLPNIDVN
                     LYKKVLKDMMSSLP"
     gene            18702..18950
                     /locus_tag="VEV83_18365"
     CDS             18702..18950
                     /locus_tag="VEV83_18365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47149.1"
                     /translation="MNSRNRDLLVLTKKASMNQAELEHEIELLNGLFYLVESSNAVSL
                     ANEVIDINRYKIVRNLKKVRRIVEQPIMKPFVFISNKN"
     gene            complement(18966..20222)
                     /locus_tag="VEV83_18370"
     CDS             complement(18966..20222)
                     /locus_tag="VEV83_18370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK47150.1"
                     /translation="MEQLSKLAETMVGSEIVRLGNEISERKRRGEEIFNFTIGDFDPE
                     VFPIPKALEELVIESYKHHYTNYPPAEGVIELRTAVSDFLKEWEGLSYATNEILIACG
                     GRPLIYALFKSVVDEGDKVIYAAPSWNNNHYTNLHKGQHCVIETTPENNFMPTAADIT
                     PHVAGASLICLCTPQNPTGTTLSKETLQEICELVIAENQNRNNGEKKLYLMFDQMYWT
                     LTYGNIEHFDPVTLNQKMRDYTIFVDGISKAFAATGVRVGWAMGPQAVIQKMKAFLSH
                     IGAWAPMAEQKATAKYLPQTELVREHFREFKQALETRLQKIYDGLVCLKNKGFTVDAI
                     TPQAAIYLTVKFDLKGKKADGKVLESQEDVTEYLLNEAQLAVVPFYAFGASHQSPWYR
                     LSVGTCRIEDIEPFLQRLQSALEKLQ"
     gene            20349..21044
                     /locus_tag="VEV83_18375"
     CDS             20349..21044
                     /locus_tag="VEV83_18375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47151.1"
                     /translation="MSRRPFTYAMPNLNLGNSDTYMPLLALVVLIYVWKFVHGLEKKF
                     LLLYIAGSLLTFAITNILRYQRVPNLYLYHFYTWFELVVVSYFITTATYGRRNAVYYL
                     LIISFTIFTIIDISFWESLSNFNSNTSTADSIILLVLSMLYVLQLTKSDEILYFQKLP
                     SFWFVTAFLVSSALSIPLMIKYGFYTGNPKNFSEGNNLWGIMDLTYIIKFVLICVGML
                     CYKFYPPQASTSK"
     gene            21047..21865
                     /locus_tag="VEV83_18380"
     CDS             21047..21865
                     /locus_tag="VEV83_18380"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47152.1"
                     /translation="MCQLHVCLLDSETDLSDYILIGSALMLLFVIFFYLMMLQLHRRR
                     ITHQQEMHELTIQYERTLLQSQLEIQEQTFRNISQEIHDNIGQVLSLAKLNLNSLENV
                     GQSAEKINVTEELLGKALSDLRDISRSLSGEKISEIGLQNAIQNELRMVERITKMKCF
                     FKYDSFTPQFSKEVNTIIFRMVQEILNNIIKHAKASKINVTLASNEQQTSIHIKDDGT
                     GFNPETLDKVNTGIGLGNIKKRCDLIHGICTINSRSGEGTSVDIAVRHDQKVSA"
     gene            21862..22500
                     /locus_tag="VEV83_18385"
     CDS             21862..22500
                     /locus_tag="VEV83_18385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47153.1"
                     /translation="MINVSLVDDHVLLRNGLSAVIDSFDGYNVVFEADNGRHFIQQLE
                     THKRPHVVLLDISMPVMDGFETAKWINENAPDIKVLVLSMVDKEEAVIRMLREGVRGF
                     ILKDSKPHVLRQALDEVMNKGFFLNDVVSGQMLNILREPPESIHKNSLSEKEIAFLKL
                     CCSEKSYKEIADEMNISLRAAEALRSSLFEKIDTPSRIGLVLYAIRNGYFKV"
     gene            complement(22526..23167)
                     /locus_tag="VEV83_18390"
     CDS             complement(22526..23167)
                     /locus_tag="VEV83_18390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HYK47154.1"
                     /translation="MCNALNRFDKSTFHSFCDVLSARDADLAAVIKRYGYPPMWTRAA
                     SFPTLIQIILEQQVSLASAKAAFSQLTKKIGVVTPVKFLKLSDEELKACYFSRQKIIY
                     AKELASAVTGGRLSFNKLKRLPVDEIRQNLKTIKGIGDWTVDIFLMMCLQHTDIFPAA
                     DIALIKSVKEVKDLPAQLSTKEVLSIAENWRPLRTIAAYILYHAYLSKRNRVG"
     gene            complement(23160..23951)
                     /locus_tag="VEV83_18395"
     CDS             complement(23160..23951)
                     /locus_tag="VEV83_18395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HYK47155.1"
                     /translation="MVHQIQEGYVKTETHYGVTIIEFYHPQSNSLPAKILNELALEIH
                     FAGEHDESKVIILQSGGEKVFCAGASFDELLAIRNEAEGIKFFSGFANVINAMRKCPK
                     LIIGRIHGKCVGGGVGLAAACDYAIAVETADIKLSELALGIGPFVVGPVVEKKIGASA
                     FSQLAIDAGTWRNADWARRRGLYAEAHSTLESVDEAVRRLSSSLIHYSPQAMAELKKI
                     FWKGTEHWEQLLHERAAISGKLILTDFAKNFIRDFKAKQAAQKNV"
     gene            complement(24122..26173)
                     /gene="paaZ"
                     /locus_tag="VEV83_18400"
     CDS             complement(24122..26173)
                     /gene="paaZ"
                     /locus_tag="VEV83_18400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HYK47156.1"
                     /translation="MNKLENFAHGKWISGDGDGQVLSDAITGEPIAVATSKGIDFKGM
                     IDFAHSVGNPNLRNLTFHERGRMLRALALHLRDHLDKFYAISYKTGATKADSWIDIEG
                     GIGNLFSYASLRRKFANEIFAVDGEGINLSKNNTFMGHHILLPKEGVAIHINAFNFPV
                     WGMLEKVAVNWLAGVPAIVKPATITSYLTEAVVKEIIASGILPQGALQLICGNAGDLL
                     DHVTSQDVITFTGSKSTALKLKAHERILTESVPFNMEADSLNCIILGDDVAPADPEWD
                     IFIKEIRKEMTVKAGQKCTAIRRIFVPENKIEDVWKTLSRSLSQTTIGNPLNEKVRMG
                     SLAGQSQREEVRGQVQKLLASSQLLYGSLDSVEVIDADSKKGAFLSPLLLMNEQPFAT
                     TDVHEVEAFGPVSTIMPYATLDDAIALSKMGKGSLCSSIVTASDRIAKAYVLGAGTHH
                     GRILILNRDCAKESTGHGSPLPMLIHGGPGRAGGGEEMGGVRGVKHYMQRVAIQGSPT
                     SITAITQIYQQNAKGNETAVHPFKKYFEELNIGDQVVTEKRMITSEDIDKFADISGDH
                     FYAHIKTTDFSGTMFERQVAHGYFIMSVAAGLFVDSYEKNPVLLNYGIDELRFTKPVY
                     PGAEIYIRFTCKEKIPQEKREETDIERGIVKWLVEMIDDTNEHVGVATILTMVAKREK
                     S"
     gene            complement(26278..26640)
                     /locus_tag="VEV83_18405"
     CDS             complement(26278..26640)
                     /locus_tag="VEV83_18405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HYK47157.1"
                     /translation="MDKKTIVLGASPNPSRYSYLAVNRLIAHGHDVVAIGRRNGRING
                     TNIITDHPMIEGVDTITLYLNAQNQKQYYDYILSLHPKRIIFNPGAENDELASMAAQH
                     NIEPMEACTLVLLSTGQY"
     gene            26921..27346
                     /locus_tag="VEV83_18410"
     CDS             26921..27346
                     /locus_tag="VEV83_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47158.1"
                     /translation="MAKANKKAKKAAPKKAASKKSAKKAAPKKAASKKSAKKAAPKKA
                     ASKKGAKKAVKKAAPKKAAKKAAPKKAAKKAGRKAAPKKAAPKKAAPKKAAKKAAPKK
                     AAAKKAAPAAPPQSSNDMQAAVAEQTGNGGESQGSGNGS"
     gene            complement(27451..>27928)
                     /locus_tag="VEV83_18415"
     CDS             complement(27451..>27928)
                     /locus_tag="VEV83_18415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HYK47159.1"
                     /translation="GAAIFAYEVSDPKRYGVVEFNEEFKALSIEEKPEDPRSSYAVPG
                     LYFYDNEVVSIAKKIDPSPRGEYEITDVNKVYLKKGKLHVGVMNRGIAWLDTGTFESL
                     SDASEFVRVIEKRQSQKIGCIEEVAYRMGFIDHAQLMKLADCYSKSGYGAYLKKIK"
BASE COUNT         8120 a         6118 c         6429 g         7261 t
ORIGIN      
        1 ttagatacag gttcgattcc tgtcggggct actaccagga tcgtgcttac ttcaatcatc
       61 tgccaaacga cgtcgctgcg cgccgttctg acatcgatca atagaagttt cctaaacttt
      121 agaaacaggt tccgtgccct ccgggcaggt cggattcttg ccgcggctac tacgaagacc
      181 atattggctg tagttcaatc cgcccgttga atgccctccg agcatagcac aaaacaaagt
      241 tcctaaacct cagatgtagg ctcagccgga atgcattaac gcagccaggt taagcttttc
      301 tcttatttga ggtaaccagg atcacaacac cggccgccgt aactgcgatg ccggcaaaca
      361 aaggccagtt aacggtgtga ttttcttttt tattcacttc gagcggtccc acgtcgacaa
      421 ccttttcctc gtgtgtaaaa ttaatactgc gaaaaaccat cattacaatt ccgataatga
      481 tcagagcgat agctaatcct ttcatttgtg cttattttga tgaagaaaat atttgctcga
      541 tcgtgtgcat aaagccactc atggggcctt ccattttatt tgtcctgtca tccatagcag
      601 gatcgttgat tagttcgccc atgtgaagtt caaccgggag atgctttaaa atattagacc
      661 gctgagtggt gaaaaaagtc atcacattgc tgcccgtctt atcttttaaa tgttgaccaa
      721 gcaaatgatc aactgcgtcc accacgtttt gcatctcact gcgcgctgct tcagctgaga
      781 cgcgggaata gccggccacc gactgaataa catcgttcgt atgctcacag aacagttcgt
      841 ctaacatatt atcgcccggt gtgtttatga gcttctctgc tgtttccacg ctcctggttc
      901 tcttataaaa gccagcgagc acggcaggaa ttgctgcgct gccgatatcc ggaatttgat
      961 cggaaacagg ctcctgcgta ttaggattga ttttcggcaa tggcttatag ccaagctggt
     1021 tcctgacttc ctcaatgaga tcgatagcca taaactacgg ttttatatac caactgaaga
     1081 aagaatcatg ccattgtggg ctgttcgtga ggccaataaa aatgccctca tatgtgatta
     1141 tgagggcatt caaaacgagt ttttgttaaa actagtccgc ttccgttaaa atcgattttg
     1201 attttacttt cagcaggtcg ggaccatttt cgagcgaagc ttttttgaat aacatagccg
     1261 tccatacatg atcaagggga acctggttca ctgcctcgta ctcactttca ctaagaaatt
     1321 gccagctcga atgcctgttg agatcactgg cgatcttgct ggtaactttc gggtaagcta
     1381 tccacaactt actttttgaa tttagggccg ggaaaacttc ctgtaaaata ttcgttaact
     1441 ggttatggtt aaccgcaaat accagcgcaa agtcgatctt acgagtcctc aaaagaggcg
     1501 tgacattttt cgcgtaggat aattttgcaa actgcttttc aatagaagaa ggaagtccct
     1561 ggattagtaa gtttttttct tccctcagat ccaacttttc aaacaaactg ttagagaaca
     1621 ttctgtaatt tgaggttttg tattagtaat acgggagggc aaaggtaagg cttttttact
     1681 gccgcagcaa gaaattacca aaaactagcc gtgaacgcat tatttgagaa cagaacaaga
     1741 tcaataacag cctgctatgt tcaccaaaaa tttagaaagc acgaaccgct cgcacgtaaa
     1801 atcggccacc cttcgacttc ttggtttggg acccgttata gaatgactgc gcccatgctt
     1861 tagtactgtc gacctctgtt gaactccagt aataaaattg cgtgaagccg gtaaatgcgc
     1921 ttttattcag atagagtttc gccagttcgt cctttgaggg caggaaccag tcggcataac
     1981 cgccgcctct gtaagacgtg caaagtgtgg cagcgtacgg accaatcttc tggatcgaaa
     2041 ttatcttttt tgtgttaagc gcaccagttc ctatcgccgt gccggttgct cctgttacca
     2101 cgaatgaatc gttgtcccac gttgtctggc cctggttttt aaaggcggct accaacccgt
     2161 gcagttttgt tgaatctaca taaaagacaa tgcctccccc aacggtgtct cctacatgat
     2221 acttaatagc gacgctgtta tcagccgatc gcgtggctgg tgttcgattt tcaaccgttt
     2281 gcttttcgca agacatcaac agggaaattg cagcaagagc aactgtgatt tctttggtca
     2341 tgagaagttt tttgaggtta acaaatgagc tttcgcggct ggcgttgata aagactgagt
     2401 tctgaaaacg caaggcagca aaaatacgcg ctgttgtata agctcgtcaa aaaatatttt
     2461 tcgggcggat agttccggtt tcaagagaca gactccgtgt atttttgcgt gtcgcacgct
     2521 gctgacaaac cacggcattt cttaatttta tttcgctaaa ttcgtggctg caacgcgggc
     2581 tgagagatag aagttaatgc ttatggattt taatttttca ccctaatgaa acatttcgct
     2641 tttgcatgta gtgttacggg caaatcaggg agatagtaag taccaattaa actaacaata
     2701 ccgcttaatc actaagaaac cacgccccgt aaaatcggcg acatgttttg aatcgaagga
     2761 aatttttcac ttccaataat acaatctgaa acgaatttgt tatgatgcac ctgtagtcat
     2821 tcaattattc tccactaaag cgaattatat gaaaacgagt aaattactgg caatcgtggt
     2881 tctgctcttc gcaacatgca ccaaagacag cagcgatgcg accaaatcag gggcaatcga
     2941 aaaaagcatt atcggttcaa cggccacaga caccgtaaaa attgcgatca acgatcttgg
     3001 aacacggact tatttgggta tggtaggagg tttgtacccg ggagggaaaa acagcccatc
     3061 gcttcaatat aagaaggatt taaagaagtt cgcgaacgcg attaaaccct taaataccgc
     3121 gggcgtgata gactctattt cgggtaaaat tgtttttatc ggtcttggcg gcagtacggc
     3181 aggccacatg atgcgagtct tgcgggaaat gacgatcaat gacactgcca ccaatcgatt
     3241 tcttaagtta gtgaacgcaa cctacggggg cggaatcgct tcgtttcaaa gcatagctaa
     3301 tcccaccgat gtttattggg ataccgtttt taatgcatta gcagcaacta gctcaaccgg
     3361 cgaccaggtc gaaatccttt atgtcgaatc agaggactct tcccaggtgg tcgccttccc
     3421 ggaccgcccg tacatcgcga agaacgatat tgaggcggcg gtacgaacat gcaagacaaa
     3481 attcagaaac ctgaagttcg tttacttcct cggaagaaca accaccttcg atagctttgg
     3541 tttaagccag gttacgaatc gagaaccatg cccgtattac aatggatggg cgaccaaatt
     3601 tgcgatccag gatcaaataa atggcgtccc gggcaccgaa tataaaggcg atacggcggt
     3661 tgcgcctctc atgacgtggg gatggtacca gtgggccgac ggaacagatg tccccaggca
     3721 ggacggcttc acctggcagc ctagcaatac aaaggatggg ctgcatgcaa acgatgacgg
     3781 ggaagacact cttgcgacgc gctttaagaa ttttttgatg acagacaggt tcgcgagtat
     3841 ctggtataag aaacactaag ttgagagata agagttaact tttcatggac acagcgctaa
     3901 cagtcgtcaa cggtcaccct gcgaacatat ttcggctgag caaccgttca ggtcacttct
     3961 ttattgacaa ttcatcgcat acattaataa aaaagccgac tctagattga gacggcttct
     4021 aattaagtgg gcccacctgg gcttgaacca gggaccccct gattatgagt caggtgctct
     4081 aaccagctga gctatgggcc cgatcctcat tcgaggatac cctgaaacaa ggagcgcaaa
     4141 aataagaaat cacatcgtac gtggtttgct tttgatgtcg ataattttga gcgatgatca
     4201 aaataaaaaa tatcatattc gatcttggtg gcgtgatttt aaatatcgac ctgaaacgaa
     4261 cggaacttgc tttcgcagaa ctgggagtcg gaaactttaa agagtattat acattgcaga
     4321 cagcaacccc gctttttgaa gatcttgaac ttgggcacat aactccgaaa aatttttatg
     4381 atgaatttcg aaagttggcc aaacttccgc tcacagacga gcaaataaga acagcgtgga
     4441 atcgcctgct cgtaaatttt cccgtcgaaa cgatcgactg gctgaaaaat ataaagtcca
     4501 aatacaacat cttcctgcta tcaaacacga acgagatcca ctacgaggca tttacgaaaa
     4561 tgtttgagga ggaaatcggc gtcggtaaat tggacgatca gttcgtcagc gcctattatt
     4621 catttcgtat tgggttacgc aagccgtcta aggaatctta tgaggagata ttaaaaacgg
     4681 aggagttaac ggccgcggaa actcttttca tagatgattc aatgcaaaac attcagggcg
     4741 ccgcgtcggt gggattgcaa acccgttacc ttccatcgcc acatacggta atggaactgc
     4801 acctgtaagc aagtcacttt atttcttcaa agtctatata atcttctttc ggcgggcggg
     4861 atttagcttc ccgatcgggt tgctgctggt tagcattttg ctgctgcctg ttattcatct
     4921 cgtttatctt attgcgcatt tgcgcagacg ctttcgatac cggcaatata aaatcgaata
     4981 ttagcttata cagtaagtaa aggacgagga cggtaaagat ccattctatc atgttgtaaa
     5041 gataatttcg tttcaaatat cgggtcagtc gcttgcgtat tttcacatct ggttaaccgt
     5101 gcataaattt tggataatac atttactcta ttatatttgc accggaaatg aaacacaaag
     5161 aagggaacga taccgttccc ttctctattt acttatgttg ccggattcag ttttggacac
     5221 gatagaaaag ttggtcaacg aagtgctgtc tcaggaaaaa gaatattttt tggtggaggt
     5281 gaagataaaa ccgaccaata acattaagct gtacgtcgac ggcgaccacg gtatttcgat
     5341 tgagaaatgc gtgcagttca acaggagcat ctacaagaag atatctgctg ctgatctgtt
     5401 cccggcgggt gatttttcgc ttgaagtttc atcgcccggt gttgagaaac ctttaaggtc
     5461 acaacggcaa tatctcaaga atatcgggcg taacgtgcag gtagttttta acgatgcatc
     5521 cgaaaagatc ggcaaattga ctgaggttac cgatgcagat attattctcg aagagtcagt
     5581 tggcaagggg aaaaaagcag aagtgcacca ggttgtaatt ccattttcta acataaaaac
     5641 gacaacagtt caaattcagt tttaatcata cgaatgcacc cgcattgtgc gtcgtatcct
     5701 gtaaatcgaa attgtatggc aagtattaat ttgattgagg ccttccagga gttcaaagag
     5761 gctgaaaata ttgaccgccc cactatgatg aaggtggttg aagacgtatt taaaacgctg
     5821 cttcgaaaaa aattcggcag cgacgaaaat tttgacgtga tcgtgaacgc agaaaaagga
     5881 gacctcgaaa tctttcgccg ccggatgatc gttgaggacg gtgaagtgca aaacccgctt
     5941 gccgagatcg ggtatactga tgctaccagg attgagcccg atttcgagat cggtgaagaa
     6001 ctttatgaag aagtggatat gtacgatttt ggccgtcgcg ccatcctcgc tgcgaagcaa
     6061 acgctggcaa gccgtatcag cgacctgaag aaaaatgtgc tggttaaaaa atatagcgat
     6121 agggttggag agattataaa tgccgaagta taccaggttt ggaaaaagga agttctcctg
     6181 atggacgaag aagggaatga actaatactt ccgaaaagcg aacagatccc gcaggactat
     6241 ttcaaaaaag gggaatcgat aagagccgtt gtcaaaaagg ttgatttgaa aaatagttcg
     6301 ccagttatca tcctcagcag aaccagtccc gactttctcg ccaaattgtt ggaaattgag
     6361 gtgcccgaaa tttttgacgg tctcatcacc attcgcaaga tcgttcgtga acccggtgaa
     6421 cgtgcaaaag ttgccgtcga aagtttcgat gatcgcatag accctgtagg tgcatgcgtg
     6481 ggcatgaagg gaagcaggat ccatggaata gtgagggaac taaagaacga aaatattgac
     6541 gtgatcaact ggacgaataa tgtgcagtta ttgatacaac gttctctcac cccgtcaaag
     6601 atcagctaca tggacctgga taatgaaaat aaacacgcgg acgtgtactt aaaagcagac
     6661 caggtatcgc tggctatcgg ccggcggggg gttaacataa aactcgcctg tgaactcaca
     6721 ggttatgata tcgatgtctt cagggaaagc gaaggcgaag cagaagagta tgatatcgac
     6781 cttgatgaat tctcagacga gatcgacaca tgggtgatcg atgagctcaa acgcgttggt
     6841 tgcgacacgg ctcgcagcgt aatggatctg agtgcagagg agctggaacg cagaacagat
     6901 ctcgaaaaag aaacgatagc cgatgtgaag aagatactga aggctgaatt tgaaagagaa
     6961 taatttaagt gcgggtacgg tagttgctta cataaaataa gctcacctgg tttctcgtac
     7021 cagcgcacac ataaataata ttgaatggct gaattgaaat taccaaggtt attaggtgcc
     7081 gccaaagaat ttaatattgg tcaggatacc cttattgaat ttctcgttag caaaggtttt
     7141 gatcgcgacg aactgaaacc tactgcaaag atcagtgaag atatgtacca ggctttgcag
     7201 cagaattttc aaagtgataa agttgccaag acaaaagctg accaggtgga aattccgaag
     7261 accactgcta ctgaaaaaag aaggaaggaa gacgaagaga tcagctttag aagggaagag
     7321 ccgaaggtgc cggtcgaagt gccgccggta aaaattgccg acaagaatgg caccgaagtg
     7381 aagcctgaat tgccgaagcc tgtcgagacg cagccggaag tcgccaaagc agagatcgtg
     7441 gaaccggaga tggtgaaaat tgaagctccg gaaattgaag ggcctaaagt gttagacaag
     7501 atcgatctgt caggtataga ttcttccaca aggccgaaaa agacagaaaa gaaacccaaa
     7561 gtacaatcaa aagaagtagc gccttctccg tttttggagg aaccggtacc ccaggaagaa
     7621 gtagcagaat caactgaatc aacggccgag accgatgcgc cggccgtaat agaaaatatt
     7681 aaggcagaaa agatcgaagg tcctaaggtg ctcggcaaga tcgagctgcc tgttgaaacc
     7741 gatacccgtc cgaaaacccc cgtcgcccgc gaagaaaaaa gaaaacggaa acgtattcca
     7801 attgataaaa agggtaccga caccgcggaa agacggcctg tcatccaacc gcagcagcgg
     7861 caaggcgcag ggcctttccg aagagatggt gctccgggag atcgaagagg tccgaccagg
     7921 ggaccgggcc atcgcggtga cagaaggttg ccggaccgtg agatcgatca gaaagagatc
     7981 caggaaaaaa ttcgccagac ccaggcaaag cttgcagggt caacaggccg gggccgcagt
     8041 ctaaaagcga agcatcggag ggagaaaaga catgagatgt cagagacttc tgatgtagga
     8101 gacagcaacg tactgcaagt aacggaattt gtaacggtaa gcgaccttgc caacctgatg
     8161 agcgtaagct tcgcagagat catcagtaaa tgcatgagct tgggaatcat ggtttctatt
     8221 aatcagcgcc tggatgcgga agtaatagag ttggtggccg gcgagtttgg ttacgaagtt
     8281 gagttcatgg gcttagagga ggtggaagac gaggatgatg agatggaaga tgacgcagat
     8341 gaattacagc cacgtgcacc tattgttact atcatgggcc atgtggacca tggaaaaaca
     8401 tccttgctcg actatatacg cagtgcaaac gtggtggcag gtgaagcggg agggatcacg
     8461 cagcacattg gtgcctacca ggtaaccatc ggagaaaata aaaagatcac atttcttgat
     8521 acacctggcc acgaagcctt cacagcaatg cgtgcacgcg gtgccaaagc cgctgatatc
     8581 gcggttatcg tgatcgccgc agatgatgca gttatgcctc aaacgaagga agcgatcagt
     8641 catgcgcagg cggcaagcct tccaatgatc tttgccatca ataagatcga caaagaaggc
     8701 gcaaacgcga aaaagatcta cgagcaacta tcacagatga acatactcgt agaagaatgg
     8761 ggcggaaaat atcaaagcca ggagatatcg gcaaagaagg gactgaatgt cgacttgctt
     8821 cttgaaaaga tcttattgga gtctgacctg cttgatctta aagcaaaccc cgaccgtgag
     8881 ggtacaggaa ctattatcga ggcttctttg gataaaggac gcggctacgt ggccactgtg
     8941 ctcgtacaaa atggtacttt gaaacagggc gacctgatgg tttcagggca atatttcggg
     9001 cgtctgaagg caatgtcaaa tgaacgtaat cagcgtgtag ttgaagcgcc gcctgcatgc
     9061 cccgtacaga tcctcgggct caatggtgca ccgcaggccg gtgaaaaatt taaggtctac
     9121 gacgatgaag cagaagcgaa agaggtcgca aacaggcgtg cccaaatttt gcgcgaacaa
     9181 ggattgagaa cacgcaaaca tatcacactg gatgaaatcg gccgccgtct tgcactgggc
     9241 aatttcaaag agttgaagat gatcataaaa ggcgacgtgg acggctctgt ggaagcattg
     9301 agcgattcgt tgcagaaatt atcaaccgaa gaaattgtag taagtgtagt gcataaggca
     9361 gtcggacaga tttcggaaag cgacgtactg cttgctactg cctcggatgc gattattgtc
     9421 ggtttcaacg tgcgcgcttc atcacaggca agccgactcg cggaaacgga aggcgtccag
     9481 atcaaaacct actctatcat ttacaatgca attgaagaag tgaagagcgc gatggaaggt
     9541 atgcttgaac cgaaagtaga agaaaaagaa gtcgctaccg tggaaatacg cgaagtattc
     9601 aagttcgata aggcaactgt tgccggatgt tacgttacag atggaaaagt gaagcgcgac
     9661 agcaaagtac ggctgtttag agatggaatt cttatttacc cgaggcagga aggtgccttc
     9721 gcagaactcg ccagtctgaa acgttttaaa gatgatgtga aagaagtggc ttctggttat
     9781 gaatgcggct taacaattcg aaactttgca gacgtcaaca ctggtgatac catagttgct
     9841 tacgaagaag aagaagtaaa acggacttta taatcgcccc aacaattttc attaggcgat
     9901 ttttcgcctg acaaattgtt tgttaaaaca actttctttt ccagcagagc tttttcaaag
     9961 gagtattttt ggtggaagtg aaataactca catgaaaatt ttcctttcct tcctactgtt
    10021 cttcatctct tttggcattt ttaaaacgtt cggtcagtcg cagaagatag tagccgacca
    10081 gatcattgcc aaggttggtg acaaaataat cctcaagtcc gatatcgaca acgccatttc
    10141 agactacaaa aggcagggcg aaattcaatt gcctccgcat ccggaatgcg cttttctcca
    10201 gggccagctc gtgcagaaag tactggtact gcaggcagag aaagattcta tcctggtaag
    10261 tgatgacgat atcgacgcct tgctcgataa ccagatacgt tacttcatca atcaatacgg
    10321 ttcacaagat gtgcttgagc aaattgcagg gaagacggtg tatcaattga aggaagacct
    10381 tcgccagccc tttactgaaa gacaattggc tgacaagatg cggaataaga tcctggagaa
    10441 cgtaaagatc acacccaatg aagtcaagac atattacgat aagatcccaa aagatagttt
    10501 gtcgttctac gaaagcgaac ttgaggttgg acagatcgta atttacccga aagcaaataa
    10561 agacctggaa gattatatta cggcgcagat gctggaatgg aaaaaagaag tggagtcggg
    10621 acaaaaaaaa ttcgcggatc ttgcgaggct ttatacagac gatcctggta gcaaagataa
    10681 tggcgggcaa tacagtctaa accggaatga caaaaactgg gacccgactt ttttagctgc
    10741 agcattcaaa ctaaaagaag ggcagatatc accggtgata aagagcaaat ttggcttgca
    10801 cataattcag atggtgagcc gtgcgggtga tgatgcggtc gtaaggcata tcctcaagat
    10861 cccgtccgtt accaatggcg agatcacaac cgcaaaaagc aagcttgaca gtatccgttc
    10921 aaagataatt gccggcaccg ttagtttcaa cgaggcggta aataagtata gcgaagatga
    10981 ttacagtaag tacactgccg gccgcatcgt ttctcccaca acggggtcta cacccgttac
    11041 tatcgaccag cttgacaaag atcttgttgt gaatttgaaa agcatgaaag tgggtgatat
    11101 ttcacaaccg cttgtctaca ccgacgaacg tcagaaaact gcggtcagga tcgtttatct
    11161 tatttcgcaa acgcagcctc accgcgaaaa tttaaaggac gactacgata aagtagcaca
    11221 gcgtgcgttg aatgaaaaaa agcagggtgt gcttgacagt tggtttcgcc agcatatctc
    11281 cgacttctac attgacatta atgatcaata caaaagctgt cccggcttaa gcgaatggtg
    11341 gaatgccgca gaccacactg cttcccgcta ataatagcat aacatttttt attgcctctt
    11401 taactgaagg ggcaatttta ttatttggaa aattacatgt atgtacatat atttgcagaa
    11461 gattttgatt caatgaaatt ggaacaggca ataaaaagca gcaaattcag gaacgaggtg
    11521 cataaagcag gattaaatat tctctacacc gcatggtggt taaagacaat gatgagccgc
    11581 gaactgaagg agtacggatt aacccatgag cagtacaacg tcttaagaat attaaagggt
    11641 aaacatcccg aacagatctg cgtaaaggag atcgcctgtc gcatgatcga aaaaaactcc
    11701 aatgtgccaa ggatcataga ccggctcgag gcaaaaaagt tagtcaggcg aacatcatcc
    11761 aatactgaca aacgcgagac cgtgattgtg ctaacgcagg cgggtcttaa tattctccag
    11821 cacagcacgg acaggatcaa taagttgatg gataaatcaa ttgtactgga cgagagaaag
    11881 gcttcaacgc tcaacgacat cctggaagag atcaggaaac aggagcagta aaaaatttta
    11941 atccaataag tgtacataca tctaatggag gaaaccatga aatatagaaa cataaaggaa
    12001 atcttgtacg gccggcagtt taatatggcc ggcatgccga tccgtcaacc aattccgtct
    12061 gcgggcattc aacaggtgga tccttttctt ttgcttcatc acgcagaagt cacagtgcca
    12121 acacacaccg ttgttgataa agcgggtgtt ggacctcatc cgcatcgcgg gttttcgccg
    12181 gtgacgctca tcttcaaggg tggtgtccat catcgggata gccgcggcaa cgacaacgta
    12241 gtttatgctg gcggcacgca atggatgaat gccggcatgg gcatcgtcca tagtgaacga
    12301 ccaccggcag atatttttga gagaggcggc atccaggaga tcattcagtt atggatcaat
    12361 actccggcaa aacacaaaat ggatcagccg tcatacttcc cattgactgc agaaggaacg
    12421 cctgcttaca aatcggatga tgagctggtt tcgataaaag ttgttgccgg cgaactggaa
    12481 gatcttacag gacccattcc atccttttca cctattaacg catacactgc cgaatttgga
    12541 aaaggcggaa agtacatttt caatattcct gcgtcgcaca atcttttcat ttacctgctc
    12601 gacggtaaat taaaaattaa cgaggaaaca gaaattgaag gaaaaaatgc ggttgttttt
    12661 gaaaatgacg gcgacggatt taaggttgaa gcattagaag atacgcggtt tttcattggc
    12721 agcggcgagc ctttaaatga gcctgttgct tcgcatggtc cgttcgtgat gaacaaccaa
    12781 acagaaatat tgcaggcatt tcgcgattac caaatcggaa aaatgggaat attaattgag
    12841 gagtaaatta tttaatcaat ataaaacagt tttactatgg caacttacaa aattgatagt
    12901 gcgcacagcg agatcacttt caaagtccgg cacttgatga tcagcaacgt cacaggccat
    12961 ttcacaaaat tcgatgcaac aatggtctgc aaaaatgacg actttacgga cgcgtcggtt
    13021 tcgtttgaaa cggatgtagc gagtgtaacc acgaaccagg agcaaagaga cgttcacctg
    13081 atgagtgatg atttttttaa cgctgaaaaa tttccaaaga tcactttcag atcaacgagc
    13141 gttgaaaaga aatccgacga agaatacatt ctgcacggcg atcttaccat tcgcgatgta
    13201 acaaaaaata tcccgttgaa agtggaatac aacggccagg ttaaagatcc ctggggacaa
    13261 gaaaaattag gattcgagct gaagggaaag atcagccgaa aagaatttgg cctaaaatgg
    13321 aacgcggtga ctgaagccgg cggtgttgtc gcaggcgatg aagtgcgttt attgataaac
    13381 gtacaaatga tcaaacaggc cgaagcgcag ccggctgaac tcgccgaaaa ggagagccaa
    13441 tgaacataga aattatctcc ggcagtcctc gtaaagacag cgtaacacac cggatggtac
    13501 tcttcctgca aaagtatctg caggaaaata gcccgcacaa tataagcgtg atcgatgttc
    13561 gtgattggga catcgatgta ctgcagcagg aagtttacag gactgccgac atcgctcctg
    13621 tgcgccttaa accgttggcg cagcggatgt ttgcggcgaa tgcgttcata ctcgtgacgc
    13681 ctgaatataa cggcagctat acaccggcat tgaaaaacct tttcgatcat ttcccaaaac
    13741 aatcccataa atcgttcggg attgtgaccg cttcgccggg cgcattggga gggatccggg
    13801 caagtcagca gctgcagtta ctcataaacg cgttattcgg aatcgcctct ccacacatgc
    13861 tgatcacacc acacgtggat aagaagtttg ataccagcgg aaagttgatc gagagctcgt
    13921 ttcaaaataa cgttgacgtt tttgtgaaag agtttttgtg gcttgccgaa catgtcgctg
    13981 cagaattgca gcattcggct tgaggctttg atctataact tgtaaatttg cggctctctt
    14041 aactccccat gagcgacgaa ataaaacacg aatgtggcct tgccttcatt cgtttaagaa
    14101 aaccgttctc gtattacctg caacaatatg gtacagtaat gtatgggctg aacaagctgt
    14161 accttttaat ggaaaagcag cataaccgcg gacaggatgg cgcgggtata gccgctgtta
    14221 aattaaacac tgaacccggt aacccttttt tgcaccggct tcgtagtaat gctccacaac
    14281 ctatcgctga actatttttc aagatcgggt cagagataaa tgagctggaa aaataccagc
    14341 ccgacataaa gaaacatccg ggcctcatga aggggcacgt gccttttatg ggtgagttgt
    14401 tgcttggcca cctgcggtat gggacacagg gtaaaaacaa tgtggagttt tgtcacccgt
    14461 tcataaagag agaccttgtg ccgggaaaaa atctcgcgct tgccggaaac tttaacctcg
    14521 taaataaaga cgaacttttt gaccttgtca acatcaaccc cggcgatttt caaaaacaaa
    14581 gtgacctggc tgcaatgatg gaagttatcc atcacttttt atctatcgaa gatgaaagaa
    14641 gtccgaataa tgctgatata tcggctgcac ttagaaaagc tgcggtgctg ttcgatggag
    14701 gatacaccgt tggtggcctt gtaggaaatg gaagctcttt tgttttaaga gatccgcacg
    14761 gaattcgccc cgcttattat tatgcaaatg atgaagtgat cgttgctgcc agcgaacgtg
    14821 ctgctatcag aacgtcattt aacataggcg agaacgaagt ttgtgaactg atgccaggta
    14881 ctgcgttgat cgtggacagt gaagggaagt tcagtataaa tgagatcctt ccgcccaaag
    14941 aaagaaaggc atgcagtttt gaacggatct attttagccg cggcagtgac gaaaaaattt
    15001 atcgtgaaag aattgcatta ggacatcacc tcagtagagc cgttttggag gccgttgact
    15061 atgatctgaa gaacacgatt ttttcataca taccaaacac cgcggaggta gcatactttg
    15121 gcttatgtaa aggaatggaa gaatacctta atgaaattaa agtgcagcgt attttgagct
    15181 ggggtaacga tattaccgaa gagaagctgc atgcaatgat caaccgcacg atccggcagg
    15241 agaaaattgc cattaaagat gtaaagctgc gaacgttcat aacggaggac agcggacgaa
    15301 acgaaatggt gcagcatgta tatgatatca cctatggcac ggttcgcagg ggtgaagaca
    15361 cgctcgtggt gatagacgat tcaattgtgc gcggaacgac acttaaagaa agtatcgtcc
    15421 gcatgctcgc gcggcttgag ccgaaaaaga tcattgtagt ttcatcagct ccgcaaattc
    15481 gctacccgga ttgttacggg atcgatatga gcaagcttgg agacttcatc gcttttcggg
    15541 cagcgatcga gttgctaaaa gagcgtaacc tgcattgtgt gattaaagac gtgcacgaaa
    15601 aaatactcga acttcagcgc tgcaatcagc tgcatacaga aaacctggtg cgctacattt
    15661 ataaaccttt taccacagaa gaattatcag acaaaattgc gaacctcatc acgccaaaaa
    15721 atcttaccat cccggtgcag gtgatttatc aaacgattga agaccttcat gaatcttgtc
    15781 caacaaatac gggcgactgg tatttcacag gtaattatcc aacacccggc ggtaacaggg
    15841 tggtgaataa agcattcctg aatttcatcg agggaaaaga cgtgagaggt tattagagct
    15901 ttttctaaca acatcaggct gaataatttt taatttgcgc agataattct taccggtaat
    15961 tttagcacat ggcaaagaac gaagaaacaa agcaagacgg ttttaggcaa ctgctcctgg
    16021 tgcgtcatgc aaaaagcagt tgggctgatg tgacacaaca agatttcgac aggccattaa
    16081 atgaccgagg tgaaaaggat gcaccggaga tggcgaggcg agtggcaaaa agggatgtgt
    16141 caatcgacgc attcatatcg agccctgcga aaagagcttt tgcgacagcc cgttactttg
    16201 caaaagaatt tggcgtaaag aaaaagaaga tcattaaggt gcctgaattg tatgaagcgt
    16261 ccgtaaacga cttttacaat gccgttgagc aaaccaatga cgactataca accatagcgt
    16321 tgttctccca taatcccggc gtaactgcat ttgcgaacgg cttaaccagc acgcacgttg
    16381 acgacatgcc cacatgcggc attttcgcga tacgggttca agccgataca tggaaaaatt
    16441 tcaaagacgc tccaaaggaa ttctggttct tcgactatcc gaaaaacatc agctaagttt
    16501 tgctttaaag ttagcgaggt acactccgca gaagatcaaa acagccgcaa ggaattttag
    16561 ccagtcaagc gtttcaccgg taaatattat tgcaaggatg gccgtaaaga ccggctgcgt
    16621 gtaaatgtat gacccggtcg cggacgcgcc gatcgcagat acaccaaaaa tgttgcacag
    16681 gtacgcgaga aaagtggcac aaatgataat gaacgccacc gttaaccagt gcataaactg
    16741 aaacgtttcc cagttagttg tggccacgga tgtccatccg tatggcagca tgaagagcag
    16801 gccaatcgta aacacccacc ggataatgtg tatggcgctg tatttacgca tcagcggttt
    16861 tacgaaaaca aagtaaaatg cgtatgaaac ggcattcagt atcacgagca cgtcaccaag
    16921 aacgatattt gttgcagtgt gcgaaacatc tttcatcaga atcagaatga cggcgccgcc
    16981 tattcccatt gcaatgcccg cgatctttat ccaggtcaat ctttctttaa ggaaccatgc
    17041 ggcaaaaaaa ataatgagga tcggggtcac cagcgcgagc agtgaagcgt gaattgcaga
    17101 agtgagcgac aaacccttta cgaacaagat ctggtttagc gtaacgccgg tcaaagcgca
    17161 aatgaaaaaa gaaggaatat cctttctttc aattcctgcc cgtgatggct ttaagagaaa
    17221 caatagccag aataatatta ccgagccaac gacgcggata aggttgagcg cgggcgccgg
    17281 caacttgccg ggaacgacat attttatagc gatgtaactg atcgcaaaaa aaatattggc
    17341 gagcaacacc gccgcatgcg cttttacctg cctggtcata aagcgggcaa agatagtcgg
    17401 tcccggctat ggcaaggaag acatcatgtc tttgagtacc ttcttgtata aattgacgtc
    17461 gatgtttggc agatcgaatg tgaatacctc cgcttttttg aggtgttcag caaaattttg
    17521 attctgagta aaactgtagc accagtgctg ttccatgacg tgccggccaa gatattcctg
    17581 ttcggtttgc ccgggcgtag gaatcagcac agatcttttt tgcaaggaca acatttccat
    17641 gagtgtcgta tatccgcagc ggctgataat aaagtcgctt gaagaaatgc tctcctccag
    17701 ctcatgcgtt gaaagatggt taaacagcgt gcaatttggt aaatgcagaa atggtttact
    17761 ttcatcaggc attccgcgga tgataagaaa actatcctcc atggagcggg cagccgttaa
    17821 gatcttttct tcaaacaaag tacgttgagg ctccggtccg gagatgatga ccatccactt
    17881 gtaacggctt tgcatttgct cgatctttct gaagcgcgag acgggaccga tatattttac
    17941 aggaatcgac ggaagagaaa caggatgcga cagagcaccg gcgatgttga acttcccttc
    18001 caaatccaag acccagcact cggagaactt gttgatgtac ctgtaactaa ttttcctcag
    18061 tagtgtttcc aggaaactaa aacgtgactt cacttgtaac tgatgtgtga tgaagacaga
    18121 atgtgtcttt tcattgtcaa agccgtaacg attatccgag atcacgacat caaaatgttc
    18181 tttttccact gctgtttcca gccatttacg ctccgtccgt ataattttta gaatttttgg
    18241 tatttgaact aaaattttaa gcggcatgcg tcgtttactt tttgagtaag tgacgttgta
    18301 accaggaagt tccaggaaac taagatccgg aaattcattc tgaagcagtg tcttctggtt
    18361 tccagtagcc gcaatgttca cctggcatcc tagctccaac agataacgga taattggaat
    18421 gcaacgaact gcatggccaa ggccccagtc gagcggagca atcaatattc gtttggaatg
    18481 aaattctgcg ttcaaaaaat atttcttaag aagtgtaaaa tctccgtaat ttagaaacca
    18541 caatataatg aaccgaaaac taaactttgg tctttttctt gtgttattga gtgtgatggt
    18601 tgtgatgagt tcctgcagtg caagcaacag agttaaatgt ggttgcccac cgaaaagagc
    18661 agtagttgga taacaaattt ttttaaataa aacaggttgt tatgaattct cgtaacaggg
    18721 acctgctggt gcttacaaaa aaagcgtcga tgaaccaggc ggaactcgag catgagatcg
    18781 agcttctaaa tggtttgttt tatcttgtcg aaagttcaaa tgcggttagc cttgccaatg
    18841 aagtaattga tattaaccgg tacaagatcg taagaaattt aaaaaaggtg aggagaattg
    18901 tggaacaacc gatcatgaag ccttttgtat tcatcagtaa taaaaactaa ctgtcccttt
    18961 accattcatt gtaatttttc cagcgctgac tgtaaccgct gcaagaaagg ttcgatatcc
    19021 tctattctgc aggttcctac gctcaaccgg taccacggag attgatggct tgcgccaaac
    19081 gcgtagaatg gaaccaccgc tagctgcgct tcattcagca aatactctgt tacatcctcc
    19141 tgtgattcca aaacttttcc gtccgctttt ttccctttga gatcaaattt tacggtgaga
    19201 taaatagcgg cttgtggagt gatcgcgtcc acagtaaatc ccttattctt taaacacacg
    19261 aggccatcat agattttttg aagtcttgtc tcgagggctt gtttgaattc gcgaaaatgt
    19321 tcgcgtacca gctctgtttg tggaagatat tttgcggtgg ctttttgctc ggccatgggt
    19381 gcccaagcac caatgtggct taaaaacgct ttcatttttt gtatcaccgc ttgcgggccc
    19441 atcgcccacc cgacccgtac accggtagcg gcaaaagctt ttgagatgcc gtcgacgaat
    19501 atggtatagt cgcgcatttt ttggttcaaa gtaaccggat cgaagtgctc aatattccca
    19561 tacgttaacg tccagtacat ctggtcgaac atcaggtaca attttttttc accgttattt
    19621 ctgttttgat tttccgcgat gaccaactca catatttcct gaagtgtttc tttacttaaa
    19681 gtagtacccg ttgggttttg aggtgtgcac agacagataa gagaagctcc agccacatgc
    19741 ggcgtaatgt ctgcggcggt cggcatgaaa ttgttttccg gcgtagtttc gatcacgcaa
    19801 tgctgcccct tgtgcaaatt cgtataatga ttattattcc aggaaggagc tgcatagatc
    19861 accttatcgc cctcatcaac caccgattta aagagcgcgt atatcaacgg cctgccgccg
    19921 cacgcaataa ggatctcatt tgttgcatac gaaagtcctt cccattcttt caaaaaatcc
    19981 gacacagccg tacgtaactc tattacacct tcagcaggcg ggtagtttgt gtaatggtgc
    20041 ttatagcttt cgatcacgag ctcttcaagc gcctttggga tcggaaaaac ttcagggtca
    20101 aaatcgccta tcgtaaaatt gaagatctct tcgcccctgc gctttctttc acttatttca
    20161 ttccccagtc ttacgatctc acttcccacc attgtctccg ccagcttact taactgttcc
    20221 atttataata tttgctgcaa atgtaacgct tgggccagag cagacatcag tattatattc
    20281 cggtttattg cctcgcggct cttgtatatt aggcaagtaa tgtattgttt tgtaaggtaa
    20341 acacacgctt gtcaagaagg ccgtttacgt atgcaatgcc aaacctcaac ttagggaaca
    20401 gcgacactta catgccttta ttggcgctgg tagtattgat ctacgtttgg aagtttgtac
    20461 acggcctgga aaagaagttt cttttattgt atatagcggg cagcttattg acatttgcaa
    20521 taaccaacat cctgaggtac caaagagttc caaatctgta tttgtatcat ttctatacct
    20581 ggttcgaatt ggttgtggtt tcatatttta tcactaccgc cacatacggc aggagaaacg
    20641 ccgtatatta tttgctcatc atttctttca ctattttcac tattatcgac atctcgttct
    20701 gggaatcttt atcgaatttc aacagcaaca catcaacagc agacagcatt atcctgctcg
    20761 tactttcgat gctgtacgtt ttgcaactca ccaaaagcga tgagatactc tattttcaaa
    20821 aacttccgtc attctggttc gttacggcat tccttgtgtc aagcgcttta tcgatacctt
    20881 taatgatcaa gtatggtttt tacacaggca atccaaaaaa tttttctgaa ggaaataatc
    20941 tgtggggcat catggatctt acttatatca ttaaattcgt tctgatttgc gtcggcatgt
    21001 tatgttacaa attttacccc ccacaagctt ccacttcaaa ataaatttgt gccaactcca
    21061 cgtctgcctg cttgattccg aaacggacct gtctgattac attctgatag gttctgcgct
    21121 gatgctcttg tttgtaattt ttttttattt gatgatgttg cagctacatc gccggcggat
    21181 cacgcatcag caggaaatgc atgagcttac catccagtat gaaagaactt tattacagtc
    21241 gcaattggag atccaggaac aaaccttccg caatatcagc caggaaatcc acgataatat
    21301 agggcaggtg ctaagcctgg cgaaactcaa cctcaattcg ctagagaatg ttggacaatc
    21361 ggcggaaaag ataaatgtaa ccgaagagct tctgggcaaa gcgctgtctg acctcaggga
    21421 tatcagccga agcctgagtg gtgaaaaaat atcggaaata ggtttacaaa atgctattca
    21481 aaacgagctg cgcatggttg aacgcattac gaagatgaaa tgctttttca agtatgactc
    21541 ctttacgccg cagttttcaa aagaggtgaa cacgataatt ttcaggatgg tccaggagat
    21601 cctgaacaac attattaaac atgcaaaggc aagtaaaata aacgttacct tggcttctaa
    21661 tgagcagcaa acctccatcc acatcaagga cgatggtaca ggctttaacc ccgaaactct
    21721 cgacaaagta aatactggta tcggtttagg gaatatcaaa aagcggtgtg atctcatcca
    21781 cggaatttgt acgataaatt ccagatcagg tgagggaacc agcgtggata ttgcggttcg
    21841 acatgaccaa aaagtaagtg catgattaat gtaagcctgg tcgatgatca cgtgttactg
    21901 cgaaacggac tttcggctgt cattgattct ttcgatggat acaacgtggt atttgaagct
    21961 gataacggcc ggcatttcat tcagcaactt gagacgcata aacgcccgca tgttgtgttg
    22021 ctggatattt cgatgccggt tatggatgga tttgaaacag caaaatggat aaatgaaaat
    22081 gcgccggata ttaaggtcct ggtgctgtct atggttgata aagaagaagc ggttatccga
    22141 atgctgcgcg aaggcgttag aggtttcata ttgaaggatt caaagccgca tgttttgcgg
    22201 caggcacttg atgaagtaat gaataaaggt ttctttttaa acgatgttgt atccggacag
    22261 atgctgaaca ttctgcggga accgcctgaa tcaatacaca aaaacagttt gtccgaaaag
    22321 gaaatagctt ttttaaaact ttgttgcagt gaaaagtctt acaaggagat cgccgatgaa
    22381 atgaatattt ctctgcgggc cgcagaagct ttgcggagca gcctgtttga aaagatcgat
    22441 actccttccc gtatcggcct ggtgctgtac gcaattcgaa acggatactt caaagtttga
    22501 tgcaactttt cttcgattgt aaaaatcaac cgaccctgtt acgttttgag agataagcgt
    22561 gatagagtat atatgctgcg atcgtgcgaa gtggcctcca gttttctgcg atcgacaaaa
    22621 cttctttcgt tgatagttga gccggcagat ccttaacttc tttcacgctt ttgatcaacg
    22681 caatatctgc ggcaggaaat atgtcggtgt gttgcaggca catcatcaag aaaatatcaa
    22741 ctgtccagtc gccaatgccc tttattgttt taagattttg gcggatctca tccaccggga
    22801 gccgttttaa tttattgaat gaaagtcgcc ctcctgttac tgcgcttgcg agttcctttg
    22861 cataaatgat tttttgccgg ctgaaatagc atgccttcaa ttcctcatcc gaaagcttca
    22921 ggaatttgac gggcgttaca actccgatct ttttcgtgag ctgtgaaaat gcagcctttg
    22981 cgctcgcaag tgaaacttgc tgttcaagaa ttatctggat gagtgtgggg aacgatgcgg
    23041 ctcgcgtcca catgggagga taaccatagc gtttaataac cgctgccagg tcagcatccc
    23101 ttgccgaaag aacatcgcaa aaagaatgga aggttgactt atcgaaccgg tttagtgcat
    23161 tacacatttt tctgtgctgc ctgttttgcc ttgaaatcgc ggataaagtt tttggcgaaa
    23221 tcggtgagta taagtttacc actgatagcg gccctttcgt ggagcagttg ctcccaatgt
    23281 tccgtaccct tccagaaaat tttcttcaac tccgccatgg cctgcgggct ataatgtatg
    23341 agcgaagatg acaagcgtcg aacggcctca tccacacttt ccagggttga atgtgcttcg
    23401 gcatacaatc ctcttcgcct tgcccagtca gcgttgcgcc atgttcccgc gtcgatcgca
    23461 agctggctaa acgcggaagc acctatcttt ttttcgacaa ccgggccaac tacaaaagga
    23521 ccgatgccca aagctaattc actcaatttg atgtctgcag tttccactgc gattgcgtag
    23581 tcgcaggcgg cagcaagacc aacaccgccg ccaacacatt taccatgaat gcgcccaata
    23641 atgagtttcg gacatttgcg catggcgttg atcacattag caaatccgct aaaaaatttg
    23701 attccttctg cttcgtttct tatcgccagc agctcgtcga acgacgcacc tgcacaaaaa
    23761 accttttcac ctccgctttg aaggatgatc actttggatt catcgtgctc tccggcaaaa
    23821 tgaatttcca acgccagctc attcaaaatt tttgccggca atgaattgct ttgcggatga
    23881 taaaactcaa ttattgtaac accatagtgt gtttcggttt ttacgtagcc ttcttgtatt
    23941 tggtgtacca tacgatgcgg ttaatagcta agagatcaaa agagtagaag aggattagga
    24001 gaacctaatc atgctttcgc ctattccctc acaaaattat taaatacccg atgaattccc
    24061 tgtttcataa aatcgacttc tacgtgattg ccaaatgccc tgttgagaat tcggcccgcc
    24121 tttaactctt ttctctctta gccaccatgg tcaatatcgt cgctacgccc acgtgctcat
    24181 tggtgtcatc gatcatttcg accagccatt ttacgatgcc tctttcgatg tcagtttctt
    24241 ctcttttttc ctgcgggatc ttttctttgc atgtaaaacg aatgtaaatc tcagcgcccg
    24301 gatacacagg ttttgtgaat cgcaactcat cgatcccata gttcaacaat acaggattct
    24361 tttcatagct atcgacaaat aaaccggcgg cgacactcat aatgaaatat ccgtgcgcaa
    24421 cctggcgctc aaacatggta ccgctgaaat cggtcgtttt gatgtgcgca taaaaatgat
    24481 ctccgctgat gtcggcaaac ttgtcgatgt cttcactcgt gatcatcctt ttttctgtca
    24541 cgacctggtc gccaatgttt aattcttcga aatatttttt gaacggatga acagccgttt
    24601 cattcccttt cgcgttttgc tgataaatct gcgttatcgc ggtaatacta gtcggagatc
    24661 cctggatcgc tacgcgttgc atgtaatgct tcacgccgcg aacgccgccc atttcttctc
    24721 cgccgccagc gcgtcccggc ccgccgtgta tcagcatagg taaaggtgag ccgtgccccg
    24781 tgctttcctt cgcgcaatct ctgttcaata tcaatatcct tccgtgatgt gttccggcgc
    24841 ccagcacgta agctttagca attctatcgc tggccgtcac tatcgacgag cacaatgaac
    24901 cctttcccat cttactcaaa gcaatcgcat cgtccagcgt ggcatatggc atgatcgtac
    24961 ttaccggtcc gaacgcctct acttcatgaa cgtcagttgt tgcaaagggt tgttcattca
    25021 tcaacaataa aggtgaaaga aaagctcctt tttttgaatc agcatcaatc acttcaacgc
    25081 tgtctaatga gccatacaaa agttgcgacg atgccaacag tttttgcact tgccccctta
    25141 cttcttcccg ctgactttgt ccggccaaag aacccatcct aaccttttca ttcaacgggt
    25201 tgccaatcgt agtttgagaa agcgaccggc ttagcgtttt ccatacatct tcgatcttgt
    25261 tttcaggcac aaagatcctc cgtatcgcgg tgcacttttg tccggctttc acagtcattt
    25321 cctttcttat ttcttttata aaaatatccc attccgggtc ggcaggcgcc acatcgtcgc
    25381 cgagtataat acaattgagg ctatcggcct ccatattgaa cggaacagac tcggtgagta
    25441 ttctttcatg agcttttagt tttaatgcgg ttgacttaga cccggtgaat gttatcacat
    25501 cctgggaagt gacgtggtcg agcaggtcgc ctgcattacc acaaatcagt tgtaacgcac
    25561 cttgaggtag aattcctgac gcaattatct ctttaactac cgcttccgtt aaatagcttg
    25621 tgatggtcgc aggttttacg atcgcgggaa cgcccgccag ccagtttacg gcaacttttt
    25681 ccagcatgcc ccataccgga aaattgaaag cgttgatgtg tatggccacg ccctctttag
    25741 gcaacaaaat gtgatgcccc atgaacgtat tattcttact taggttaatg ccttctccgt
    25801 cgaccgcaaa aatttcattc gcaaattttc gcctcagcga tgcgtaagaa aataaatttc
    25861 caatgccgcc ttcgatatcg atccagctat ctgcttttgt tgcgcctgtt ttataggaga
    25921 tcgcataaaa cttgtccagg tgatcccgaa ggtgcaacgc cagtgcacgc aacatgcgtc
    25981 ctcgctcatg aaatgtgagg ttgcgcaaat ttggattacc tacgctgtgg gcgaagtcaa
    26041 tcatgccctt gaagtcgatg ccttttgagg tagctaccgc gatcggttcg ccagttatcg
    26101 catcactgag cacttgtcca tcgccatcgc cggatatcca ttttccatgg gcaaaatttt
    26161 caagtttgtt catacgcaaa tttgtgcccg caaaactaac gatagatagt ttatccaaat
    26221 gttattatgc ctgaaggtat ttgagagaga gaaccaccga agagcggcgg ttcattgtta
    26281 gtactgacca gtgctcagca agaccagtgt gcaggcttcc attggctcaa tattatgttg
    26341 tgctgccata cttgccaatt catcattttc agctcctggg ttaaaaatta ttcgtttcgg
    26401 gtggagcgag agtatatagt cataatactg cttttgattt tgagcattta agtacaacgt
    26461 aatggtatca acgccttcaa tcatcgggtg gtcggttata atgttagttc catttatgcg
    26521 gccattcctc ctgccgatcg caacaacatc atgaccgtgc gctatgagcc ggttaacagc
    26581 aagataacta taccgcgacg ggttaggaga tgcgcccagg acgatagtct ttttatccat
    26641 ctataaatga tttcctcaag taaacataca aatagtagac cgctgttcga aatctgcaag
    26701 tttatgaggc cgatgaaaag gggggcgata catcggtttt gcaaattgaa caagcctctg
    26761 gcagatgtta gtgtgtttgg gacgcgacga atcacacgag ttgaattttg ttcggaattt
    26821 tttttcatga tttaaatttt ttttgcaaag cgctgttgta attcataaaa cagttttaac
    26881 ttaacaacct tatttctata aaaaagaaaa ccactcatcc atggcaaaag caaataaaaa
    26941 agcaaagaag gctgcgccga aaaaagcggc gtctaaaaaa tcggcaaaga aagccgcacc
    27001 aaagaaggcc gcttctaaaa aatccgcaaa gaaggccgca cccaaaaaag ctgcttcaaa
    27061 aaagggagct aaaaaagcag taaagaaggc tgctccgaaa aaagctgcga aaaaagccgc
    27121 accaaagaaa gctgccaaga aggctggcag gaaagccgca ccaaagaagg ccgcacccaa
    27181 gaaagctgct cctaaaaagg ctgcgaagaa agcggcgcct aaaaaggcag ctgcgaagaa
    27241 ggctgcaccg gcagcgccac ctcaaagttc aaatgatatg caagccgcag tggctgaaca
    27301 aactggaaac ggcggtgaaa gccagggctc gggtaatgga tcttaagaaa aaatttttac
    27361 cgataaatgt cccacccggg acattttttt tgcggtataa taaaaacgtc ccgttttttt
    27421 gcgggacgtt ccattcaaga cttgatattt ttactttatt tttttcaaat aagcaccata
    27481 tccactcttt gaataacaat cggcaagctt catcaattgt gcgtggtcaa taaaacccat
    27541 gcggtaggcg acctcctcaa tgcacccgat cttttgcgac tgtctttttt cgatcactct
    27601 tacaaattcg ctagcatcac tcagtgattc aaaagttccc gtatcaagcc aggcgatacc
    27661 gcgattcatc acaccaacat gcagctttcc ttttttaagg tatactttat ttacgtcagt
    27721 tatttcgtat tcaccgcgcg gtgaaggatc gatctttttt gcgatggaga caacttcatt
    27781 atcatagaaa taaaggcccg gaactgcata cgatgatctc gggtcttcgg gtttttcttc
    27841 aatggacaac gctttaaatt cttcgttgaa ttccacgaca ccgtaccgtt ttggatcgct
    27901 cacttcatac gcaaatatgg ctgcaccg
//
LOCUS       DASQJI010000676         6085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2090540,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000676 DASQJI010000000
VERSION     DASQJI010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6085
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090540"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VEV83_18420"
     CDS             complement(<1..220)
                     /locus_tag="VEV83_18420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47160.1"
                     /translation="MTKTPPPLPRELVKAGPGLAAQNRKFLYLLTVACFLITGGILWD
                     ISWHQSIGRDRFLTPPHIVVYLGAILGAL"
     gene            complement(599..898)
                     /locus_tag="VEV83_18425"
     CDS             complement(599..898)
                     /locus_tag="VEV83_18425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47161.1"
                     /translation="MKPAPTFMHPVHKTITMRSRLNRISPFLLLVLFLVFWSCYGFFT
                     DADTITLAKIILLPFMIVNLLLADFAVWNYYEGRKKPLIWIIESVLAAAILYWFI"
     gene            complement(1183..2202)
                     /locus_tag="VEV83_18430"
     CDS             complement(1183..2202)
                     /locus_tag="VEV83_18430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47162.1"
                     /translation="MKTTHVIVFAIVAFAGCTKKESNPVISEGVNNNISLGVDTVKGP
                     LTDLGPGTYMGFTGGLYPGGTNYPTLQYKKDLKNFASSIRPLNGNGAIDSAAGKIVFI
                     SLGGSTSGHMMRVLKEKTIYDTTTNPFLKLLNCSDGYGVASFQSIANPADSYWDHVFN
                     VIVSSHMFPAQVQVIYIETEDSSQVVSFPDRPNLVKDDIEAAMRTCKSKFPNLKLVYF
                     LGRTTTFPDSTNQLTQVTNIEPCPYYNGWAIKFAIEDQINGVTGTQYKGAGTVAPLMT
                     WGWYEWANGTDVPRQDGFVWQESDTKDGLHATTAGEDTLSNRFKNFLLTDKFASIWYK
                     KKTGK"
     gene            2674..3750
                     /gene="glk"
                     /locus_tag="VEV83_18435"
     CDS             2674..3750
                     /gene="glk"
                     /locus_tag="VEV83_18435"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HYK47163.1"
                     /translation="MSVFTLATYSIAMPVKPLIPLAFTHEEHHPENKTVTIIAGDAGG
                     TKTNMALFRADEKGVTQLREARYISHEYNSLADIIIQFAASEWPDRICVAVAGPVLHG
                     KVKLTNLSWQLDSDAMSTALKVPIAFLNDLEATAYGLSAIQSNEIVALNSKSVSAEGN
                     IALISPGTGLGEAGLYWDGNAYHPFAAEGGHSDFAVRTEQDIELYRFLQQQFGHVSWE
                     RVVSGPGIHAIFNFLTTVQRKRVPAWLTDEMKDGDPSAVISNAALHQNEAVCVETLQL
                     FSRYLATEAASLVLKLKATGGCYLGGGIPPKILSVLQQEEWIKNFIDSGRMKPLLEQV
                     PVYVILNQKLPLLGAAHYAAFSMR"
     gene            complement(3819..4790)
                     /locus_tag="VEV83_18440"
     CDS             complement(3819..4790)
                     /locus_tag="VEV83_18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HYK47164.1"
                     /translation="MKKKLTLKGIWGLLRDSFSGFGQDNVTKLSGSLAYYTVFSLGPL
                     LVVIISLCGIFLGREAVEGKIFSTLDQFVGHDTALQLQQIIKNAFVGGKGTLAAIIGI
                     ITLLIGATTVFGDIQDSINRIWGLKPKPKKSWLKMLQNRFMSFSIIVSLGFLLLVSLG
                     VSAIIEALSNRLKAAYPDVTVVVFYVVDLVLTLIVTTLIFAVIFKVLPDAKIKWKDVM
                     AGAIATALLFMLGKFGISFYISKSNVGTTYGAAGSLVILLLWVYYSAIILYFGAEFTK
                     SYALKYGDEIHPSEYAVTMKQVEVETGKQSVQDKEAANPQVKMKAPK"
     gene            complement(4917..5810)
                     /locus_tag="VEV83_18445"
     CDS             complement(4917..5810)
                     /locus_tag="VEV83_18445"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47165.1"
                     /translation="MQILITGANGFLGQHLSVYLKQKDFDVISTSRGECRIPSSFNVP
                     YYPAELTQRSDVEQLVSATKPDVIIHSAAMSKPDECETDREKCILYNVSATQFLLTAF
                     ERTANTNSHFIFTSTDFVFGEGGPHSENDVPEPINFYGESKLMAEKLLAETSVVCTIV
                     RPVFMYGPVWSGVRSSYLQQVKNALQQNQPIKAVSDQLRTPTYVYDVCKGIEAIIVHK
                     QAGVYHLAGRNVLSPYQMALSVAHYFHLDSSLIQEVTLNSFFEAARRPLRSGLKIAKA
                     EEELGYDPVTFEEGIKLTFSH"
     gene            complement(5881..>6085)
                     /locus_tag="VEV83_18450"
     CDS             complement(5881..>6085)
                     /locus_tag="VEV83_18450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47166.1"
                     /translation="TSRVEGIGPQQYGTRSLLGKKFVDIEEKYELPQTSEGFGEEGEE
                     AGTEESADQALDEGSADEQEEEI"
BASE COUNT         1663 a         1357 c         1352 g         1713 t
ORIGIN      
        1 ataatgcccc caggatagct ccgaggtaaa caacaatatg tggtggcgtg agaaacctat
       61 cgcgtccgat ggattgatgc caggagatat cccacaagat gccgcctgtt attaaaaaac
      121 aagctacggt gagcaaataa agaaatttcc tgttttgcgc agcaaggcca ggcccggctt
      181 ttaccagttc gcgcggtaac ggaggtggtg ttttcgtcat agtccatatt gcgctgcgag
      241 agtctgcaag cgcttgatcg tcttataatc tttacgaaat gttcctgcaa ctcttacgct
      301 ctatcaagtt cgatatacaa ttctgcggca agatcggttg ggcgtcttaa aacattccgc
      361 atttccttgc tctttaacaa tttttaactt gtcatttctc gttatgagta tttttagttc
      421 tgttgtgtga acgagctgcc ttggtttgaa tttgttggtg ctgcaacaat tgtgaccgac
      481 aatcacagtt gttttaacga agagggaaat cttctatgcg ccgggacatt ttccctgagc
      541 tgggacaggt cggtaggcga agagattttg gaatgaaagc gctgtggata ccaggagatc
      601 aaataaacca ataaaggatc gccgctgcca ggacgctttc tataatccag atcaacggtt
      661 tctttcgtcc ttcataataa ttccatacag caaagtcggc gagcaacaga ttaacgatca
      721 tgaaaggaag caagatgatc tttgccaacg tgattgtgtc cgcatccgtg aagaatccat
      781 agcaggacca gaaaacaagg aaaagaacaa gcagtaagaa gggtgagatc cggtttaatc
      841 tcgagcgcat cgtgattgtc ttatgaacgg gatgcataaa ggtgggagct ggtttcataa
      901 ataatttttt caacgttcct gataatgcgc cccaaaaaat tccacaaaca actggcgcaa
      961 agcgttgtca aggacaatta gaaggtttac tgacagcaga aatgaatatc gggcttatag
     1021 atctggaata cgaattacag ttagttcctg gcaaaagaaa attcccgcaa taaatttaga
     1081 aaagcaatct gattttccaa aacttttttt atgaatccac agcctttttc gtaaacattt
     1141 tttttatggt ataatactca ccatgttacc acaaaaagaa tttcacttcc cggtcttttt
     1201 cttataccaa atgctcgcaa atttgtcggt caacaaaaaa ttcttaaagc ggttagagag
     1261 cgtatcttct cctgcggtcg tcgcatgaag gccatccttc gtgtcacttt cctgccaaac
     1321 aaagccatct tgccgcggaa catccgttcc atttgcccat tcataccatc cccaggtcat
     1381 tagaggagcc acagtgccgg ctcctttgta ctgcgtcccc gttacaccgt tgatctggtc
     1441 ctcaattgca aacttgatag cccaaccatt ataatatggg caaggttcga tatttgtaac
     1501 ctgtgtgagc tgattcgtgc tatcggggaa tgtagttgtt ctgccaagaa aataaaccaa
     1561 cttcaggttt ggaaacttcg atttgcatgt tcgcattgcc gcttcgatgt catcctttac
     1621 aaggttcggc cggtccggaa agctcacgac ttgtgaagaa tcttctgttt ctatatagat
     1681 cacctggacc tgcgcgggga acatgtgact tgaaacgatc acgttgaaaa catgatccca
     1741 ataagaatcg gccgggtttg cgatgctttg aaatgatgca accccatagc cgtctgagca
     1801 gttcagtaat ttcaaaaagg ggttcgtagt tgtatcgtag atcgtttttt cttttaaaac
     1861 gcgcatcatg tgaccgctgg tgctgccgcc taaagaaatg aaaacgatct tacctgctgc
     1921 tgaatctatc gcaccatttc cattcaatgg tctaatacta gaagcaaagt tcttcagatc
     1981 ctttttatat tgaagcgttg gataattagt tccacccgga tataagccgc cagtaaaacc
     2041 catataagtg ccagggccaa gatcggtaag cggacctttt actgtatcca cgccgagaga
     2101 aatattgttg ttgacccctt ccgatattac cggattactt tcctttttgg tgcagcctgc
     2161 aaatgcgacg attgcaaata caataacgtg agttgttttc atacaaatag atttgaagcg
     2221 gtatgtaaac tgtttgatct tgttttgcag cagaagtcct tcaacatcag aaagctccat
     2281 ccgggatggt ggagttgtgg gcagatatcg aagtcccagg ggttgcagat tcttgcttca
     2341 atccgcgtac caaattcctg ttcgccacga tgcatcgcga cgacatgtta ctaccgataa
     2401 attttcttgc tatttctgcg gagcggccgg ttgatcaccc gcagagcata tgtattctta
     2461 ccgaataatt ccagcaatcc acatcgcctc ttaattgatt ttgctttttt taaggcccgg
     2521 ggctcaggca gatacagatt actgaaagaa tttgggaaat acgcagtgcc gtcttaagag
     2581 atagtgttcc tttcaaaaca tcaaagcctc aataaatcta aataaaaaac ctggtgatcc
     2641 aaaatttttt ttggttcaaa acgcccggcc gttatgtcgg tctttacctt agcgacatat
     2701 tctattgcca tgcctgttaa gccacttatt ccgctcgcgt tcacacatga agaacatcat
     2761 cccgaaaaca aaacagtgac gatcattgcg ggtgatgcgg ggggtacgaa aaccaatatg
     2821 gcgctgtttc gcgcggatga aaaaggcgtg acgcaacttc gggaagcgcg ttatatttca
     2881 cacgaataca attcacttgc tgacatcatt attcaatttg ctgccagtga atggcccgac
     2941 agaatttgtg ttgctgttgc cgggcccgta cttcatggaa aagttaagct aacgaatctg
     3001 agctggcaac tcgacagcga tgcaatgagc acggctttaa aggtgcctat tgcttttcta
     3061 aatgatcttg aagcaaccgc ctacggacta tcagcaattc aaagcaatga gattgttgcg
     3121 ctcaattcta agtccgtttc ggcggaggga aatatcgcat tgatctctcc tggcacagga
     3181 ctgggtgaag ccggattata ttgggacgga aatgcttatc atcctttcgc agctgaagga
     3241 gggcatagcg attttgcggt gcgtacagag caggatattg aattgtatcg ttttttgcag
     3301 cagcagttcg gtcacgtaag ctgggagcgc gtggtaagtg gtccgggtat tcacgccatt
     3361 tttaatttcc tgacaacggt tcagcgaaaa agggttcctg catggctgac tgatgaaatg
     3421 aaagacggag atccttcagc agtgattagt aatgctgctc tgcatcaaaa tgaagcagta
     3481 tgcgtggaaa cacttcaatt gttcagccgc tacctcgcca ctgaggctgc gagcctcgtt
     3541 ttaaaattga aagcgaccgg aggatgttat cttggcggcg gcattccccc gaaaatatta
     3601 tccgtactgc agcaagaaga atggataaaa aatttcatcg acagcggccg catgaagcca
     3661 ttgcttgaac aagtcccggt gtatgtgatc ctaaatcaaa aactgccttt acttggcgca
     3721 gcgcattatg ccgcgttttc aatgagatag caaatgagaa tttaggattt aagttaggga
     3781 gttaggattc aacgctagag tgaatatttt tcttttaatt acttcggcgc tttcattttc
     3841 acctgcggat ttgccgcttc cttgtcttga acagactgct ttcccgtttc cacttccacc
     3901 tgcttcatgg tgaccgcata ctcgctcgga tgaatttcgt ctccatactt tagcgcgtac
     3961 gacttggtaa actcggcgcc gaaataaagt atgatggctg aataataaac ccagaggagt
     4021 aagatcacta atgatccggc cgctccgtac gttgtaccga cattgctttt actaatgtaa
     4081 aatgaaatgc caaatttgcc cagcatgaac agcaatgccg tggcgattgc acctgccatc
     4141 acatctttcc atttgatctt tgcgtccggc aataccttga agatgacggc gaatattaga
     4201 gttgtaacga tcaatgtcaa aacaagatca acaacataaa acacgactac ggttacatca
     4261 gggtacgccg ctttaagccg gttgctgaga gcttcgataa ttgcagaaac gcccaaagaa
     4321 acgagcagca agaaacccag gcttacgata attgaaaatg acatgaaccg gttttgcaac
     4381 atttttagcc agcttttctt cggctttggt ttcaatcccc aaatgcgatt aatggagtct
     4441 tgtatgtctc cgaaaaccgt ggtggcgcca atgagcaaag tgataatgcc gatgatggca
     4501 gcaagtgtgc ctttaccgcc gacaaaagca ttttttatga tttgctgaag ttgtaaggcc
     4561 gtatcgtgtc cgacaaactg gtccagggtt gaaaatattt ttccttctac agcttccctg
     4621 ccgagaaata ttccgcataa cgaaatgatc actacgagca gcggtcccaa agaaaataca
     4681 gtatagtaag ccagcgagcc gctgagttta gtcacgttgt cctggccaaa tccactgaaa
     4741 gaatctctca gcaatcccca aatgcctttc agggttaact tcttcttcat gcgctgcctt
     4801 ttgaggaagt tctgcaaaaa agttaccaag attgatgctt ttctgtcaag acaggctttt
     4861 gacgacgctg caagacgccg acggtgaagg ttatttttat ttacaatgga aagaagtcaa
     4921 tggctgaacg tgagtttgat accttcttca aaagttaccg ggtcatagcc aagttcttcc
     4981 tctgctttcg caattttcaa ccctgaacgc aaaggccggc gggcagcttc gaaaaaactg
     5041 ttcaaagtaa cttcttgaat taacgagctg tcaaggtgaa aatagtgggc gacacttaat
     5101 gccatttgat agggggacaa aacatttctt ccggccaggt gataaacacc cgcttgtttg
     5161 tgaacgatga tcgcttcgat ccctttacat acatcataaa cataggtagg cgtgcggagc
     5221 tgatcgctga cagctttgat aggctggttc tgctgaagag catttttaac ctgttgcaga
     5281 tagctggatc gcactccgct ccaaacagga ccatacatga atacagggcg aacgatcgtg
     5341 caaacgaccg acgtttcggc aagtaatttt tcagccatca gtttactttc accgtaaaaa
     5401 tttatgggtt cgggaacatc attttcgctg tgcggtccgc cttcgccaaa aacaaaatcg
     5461 gttgaagtaa agatgaaatg tgaatttgtg tttgcagttc tttcaaatgc tgtcaacaag
     5521 aactgtgtag cagacacgtt atataaaata catttttcac gatccgtttc gcattcgtca
     5581 ggtttgctca tcgcggccga gtgaatgatc acatcgggct tcgttgccga tactaattgt
     5641 tcaacatcgg agcgctgcgt taactctgca ggatagtatg gaacattaaa gctggaaggg
     5701 atgcggcatt cgccacgact ggtcgagata acgtcgaaat ctttttgctt tagataaaca
     5761 gataaatgct ggccgagaaa tccgtttgcg ccggtgatga ggatttgcat tgttcgctca
     5821 aagaaacacg aggttatcga tgtatgagct cagaatttta tgccgttaat attcgatcga
     5881 ttatatctct tcttcctgtt catcagcact tccttcatcc aaagcttggt ctgctgattc
     5941 ttctgtaccc gcctcctctc cttcttcacc aaacccttca ctagtttgcg gcaattcata
     6001 tttttcttcg atgtcgacaa attttttgcc aagcagactg cgcgttccgt attgctgcgg
     6061 gccaattcct tcaactcttg acgtt
//
LOCUS       DASQJI010000677         3818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2856815,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000677 DASQJI010000000
VERSION     DASQJI010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2856815"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3546
                     /locus_tag="VEV83_18455"
     CDS             <1..3546
                     /locus_tag="VEV83_18455"
                     /inference="COORDINATES: protein motif:HMM:NF019136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47167.1"
                     /translation="PQSVPIGKLKVVTAGKPTVVPVPTNIHLAGIPRTVIAGAPKICT
                     PGKDSFSLPKITPAIIKPFPAGIPEVVVAGDPTSKDQNPQSFISFTKQQGLRGNSAVT
                     SLLQDKNGNIWFATWEGGAMRYDGKNFAYFTQKEGLISNELQCIFEDRSGNVWFGGWG
                     VSKYDGKNFTNFGEREGFTNDAVACILEDRSGNIWFGADNTGVWKYDGKNFTQYTEKQ
                     GLAGSGVASILEDKSGNLWFATPNGVSKYDDKSFTNYTRKEGLCESCENWVTSIFKDR
                     SGNLWFGTSGGVSRLDRDGGSFTHYTEKEGLCFNNVSCIFEDRSGNLWFGTSGGGVSK
                     FDGRYFTDFTEAEGLINNKVKCFLEDRSGGLWVGTEDGVSKYNGSTFTHYTSKEGLND
                     ADVRSIFQDKSGNLWFGTTAGVSSYDGKNFTHYTQKEGLTFPNVESIHEDKSGNLWFG
                     SWWGGVSAFDGKTFTNFIDQFPGGEVLNILTGRNGNLWFGTRGSGVYEFDGTRITHYT
                     AAQGLNNNNVVSMLADSKGNIWIGDETGGITKYDGRTFTHFTAKEGSIENVAQGITED
                     SSGNIWIATDEGVSRYDGKTFTYFTTKEGLASNAVSSIFIDRTGNLWCGTASGLSKLS
                     LNSLSRLSASASAARSGFTEHPNSHMAGDVLFKSYFFEDGFLGLGCNRQSIFEDKNGT
                     IWIGTREGVNALHPDGDKIDTIPPTIQLTNIALFNENIPWHNLQGKKDTSLVLGNGVR
                     VGHFEFDTLSRWYNIPENLSLPYNNDNLTFNFIGITPKSPHQVKYQYKLEGLDENWSG
                     LTNRTEAPYVNLPYGSYTFKVKAVNADGYWSQEFDYSFTIRPPWWETWWAFSLYVLAF
                     IGAVSWFIAYRSRKLRLEKKILEEKVSQRTIQLEEKSAELETSLHDLKSTQAQLIQSE
                     KMASLGELTAGIAHEIQNPLNFVNNFSEVNKELVDELKAELATGNLQLATEIADDIKD
                     NEQKILQHGKRADAIVKSMLQHSKTSTGKKEPTDINALCDEYLRLSYHGMRARDKGFN
                     ANLETNFDTSLENINLVPQDIGRVLLNLYNNAFYAVMQKQKDLTGSSNLSGEQPYKPT
                     VSVTTKRCSSLPIGERRGEVEIRVADNGPGIPQSIADKIFQPFFTTKPTGQGTGLGLS
                     LSYDIIKAHGGDIKVETKEGEGSEFIIELPKKGEN"
     gene            3506..3817
                     /locus_tag="VEV83_18460"
     CDS             3506..3817
                     /locus_tag="VEV83_18460"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK47168.1"
                     /translation="MNSLLNFRKKAKTEDNIYVPTVIVITKKLNNKVEIKVTDNGNGI
                     PQNIIDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGGEIKVETKEGEGSVFNIQIPI
                     N"
BASE COUNT         1235 a          727 c          886 g          970 t
ORIGIN      
        1 cctcaatcag tccccatagg gaaactaaaa gttgtcactg ctggtaaacc aactgtggtt
       61 cctgtcccca ctaacatcca tctcgcagga attcccagaa cagtaatagc aggagcacca
      121 aaaatttgca ctcctggtaa agattcattt tctcttccga aaataacgcc cgctatcatc
      181 aagcctttcc ctgccgggat tcctgaagtg gtggttgccg gtgacccaac cagtaaagat
      241 caaaatccgc agagcttcat ttctttcaca aaacaacagg gactaagagg caactcagca
      301 gtaacatctc ttctccagga caagaatgga aatatctggt ttgccacctg ggagggcggt
      361 gcaatgcgat atgacggtaa aaattttgcc tacttcacac aaaaggaagg attgatcagc
      421 aatgaacttc aatgcatctt cgaagacagg tcgggaaatg tttggtttgg cggttggggt
      481 gtatcgaaat acgatggtaa aaattttaca aattttggcg aaagagaggg tttcactaat
      541 gatgctgtcg catgtatttt agaagacaga tcaggaaata tatggttcgg tgccgataat
      601 acaggagtat ggaaatatga cggaaagaat tttacacagt acacagaaaa acaaggcttg
      661 gctggctccg gagtcgcgag cattttagag gacaagtcag gaaatctttg gttcgctact
      721 cctaatggtg tatcaaaata tgatgataaa tcttttacga attatacacg aaaagaaggt
      781 ctgtgtgaaa gttgtgaaaa ttgggtcacg agcatcttta aagacagatc cggaaatctc
      841 tggttcggca cttctggcgg tgtatcccga ttagatcggg atggcggaag ttttactcat
      901 tatacagaaa aagagggtct gtgttttaat aatgtatcat gcatctttga agacagatcc
      961 ggaaatctct ggttcggcac ttctggcggc ggtgtttcaa aatttgacgg tagatatttt
     1021 acggatttta ctgaagcgga gggccttatc aataataagg ttaaatgctt tttggaagac
     1081 aggtcaggag gactttgggt tggcactgaa gatggtgtat caaaatacaa tggcagcacc
     1141 tttacacatt atacaagtaa ggaaggcttg aatgacgcgg atgttcgaag catctttcag
     1201 gataagtctg gaaatctttg gtttggcact accgcaggcg tgtcaagcta tgatggtaaa
     1261 aattttacgc attacacgca aaaagaaggg ctaacctttc caaatgtcga gagcattcat
     1321 gaagataagt caggaaatct ttggttcggc tcctggtggg gaggtgtatc ggcatttgat
     1381 ggcaaaacgt ttacaaattt tatcgaccag ttccccggag gtgaagttct caatattttg
     1441 accggccgta acgggaatct ttggtttggc acccggggca gcggcgttta tgaatttgat
     1501 ggcacgcgaa ttacccatta cactgcggcg cagggattaa acaataacaa tgtggtaagt
     1561 atgctggcag acagtaaagg aaatatttgg atcggcgacg aaacaggtgg cataacgaaa
     1621 tatgatggaa gaactttcac tcattttacc gcaaaagagg gctcaataga aaatgttgcc
     1681 cagggtatta ccgaagacag ctcaggaaac atttggatag cgacggacga aggtgtgtcg
     1741 agatatgatg gcaaaacgtt tacatatttt acaacgaaag aaggcctggc tagtaatgcc
     1801 gtctcgagca tcttcataga caggaccgga aatctttggt gtggtacagc ctcaggttta
     1861 agtaaattaa gtttaaactc tttatcgcgg ttgtctgcta gtgcctccgc tgccaggagc
     1921 ggatttactg aacacccaaa cagccatatg gcaggagatg tcttgtttaa atcttatttc
     1981 tttgaagatg gctttttagg attagggtgt aacaggcaat ctatttttga agataaaaat
     2041 ggcactatat ggatcggcac acgagaggga gttaatgcac tccatcctga cggggacaaa
     2101 atagatacaa tcccaccaac aattcaatta accaatattg cattgtttaa cgaaaacatt
     2161 ccatggcaca atcttcaagg aaaaaaagat acaagccttg tattagggaa cggagtaagg
     2221 gttggccatt ttgaatttga caccctgtct agatggtata atattccgga aaatttaagt
     2281 ttaccctaca acaacgacaa tcttactttt aattttattg gtattacacc caagtctcct
     2341 caccaggtaa agtaccaata taagttagaa gggttagacg aaaattggag cggccttaca
     2401 aaccgtaccg aagcacctta tgtgaatttg ccatatggca gctatacttt taaggtaaag
     2461 gccgtgaatg ctgatggtta ctggagccaa gaattcgact acagttttac aattcgtcca
     2521 ccgtggtggg aaacgtggtg ggcgtttagt ttgtacgtgc ttgcttttat tggcgcggta
     2581 tcgtggttta ttgcgtatcg ttccaggaaa ctgaggctcg agaagaaaat actcgaagaa
     2641 aaagtgagcc agagaacgat tcaactggaa gagaaatcag cggaactgga aacatcatta
     2701 catgacttaa aatccacgca ggctcaactc atccaatcag aaaaaatggc ttcgcttgga
     2761 gagctcacag caggcattgc acatgagatt cagaacccgt tgaatttcgt gaataatttt
     2821 tccgaggtga acaaagagct ggttgatgaa ttgaaggcag aactggcaac cggcaacctg
     2881 caactggcaa ctgaaatcgc tgatgacata aaagataatg aacagaagat ccttcagcat
     2941 ggcaaacgtg cagatgcgat tgtaaaaagt atgctgcagc attcaaagac aagcacagga
     3001 aaaaaagaac caaccgatat caatgcgtta tgcgatgaat acttacgatt gagctatcat
     3061 ggcatgcgcg caagggacaa aggtttcaat gcaaaccttg aaacgaattt tgatacatcc
     3121 cttgaaaata taaacctcgt gccccaggat ataggaagag tgctgttgaa tttgtacaac
     3181 aacgcttttt acgccgtgat gcaaaaacaa aaagacctta caggatcttc gaacctgtca
     3241 ggtgaacagc catacaaacc aaccgtttca gttactacga agcgttgctc ctccctccct
     3301 attggagagc gccggggtga ggttgaaatt cgagttgcag ataacggccc cggcattcca
     3361 cagagtatcg ctgataaaat ttttcagcca ttctttacaa ccaaaccaac aggacaggga
     3421 acaggattgg gattaagtct aagttatgac attatcaaag cacatggcgg tgacataaag
     3481 gtggaaacca aagaaggtga aggaagtgaa ttcattattg aacttccgaa aaaaggcgaa
     3541 aactgaagat aatatatacg ttcccacagt catagtaatc acaaaaaaat tgaataacaa
     3601 agtggaaata aaagttacag ataatggcaa cggcattccg caaaatatca ttgataaaat
     3661 ctttcaacca ttcttcacca caaaaccaac tggcgaagga acagggttgg gattaagctt
     3721 aagttatgat atcattaaag cacatggcgg tgaaataaaa gtggagacga aagaaggtga
     3781 aggatctgta tttaacattc aaatacccat caactaaa
//
LOCUS       DASQJI010000678         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2244282,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000678 DASQJI010000000
VERSION     DASQJI010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2244282"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1184)
                     /locus_tag="VEV83_18465"
     CDS             complement(45..1184)
                     /locus_tag="VEV83_18465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47169.1"
                     /translation="MKKNLLIALATLFVAGFFVYYGCQKISDASSRSGSQSASDASLA
                     TTPIQVYGVWHAGNDACTWATVRTVTEFDSKNHWLIDRGDGSGKPSVNVVILSFVNPL
                     KLLNQTNDAGTVNGVPKGMTSDIVNYFKSRGIRVMLSIGGITFVKDWNTALAQNGTLL
                     GSRAAALATNLGVGIEIDYEENSSPNLTGLQNFITAYRAVHPYDATGNDQTARLTIDL
                     AAGDRWLIGICQKATADWLKTNAPVLDYANAMVPSRQPRSASDAIANWQEHVDGKPQY
                     APPIPPLAPAKFTGSLWLTGSKILPECTDFNNSLQKSTGSYVQSVAPNGAGTTPGMLG
                     YMFWAAECEGTRTVCTTPPNSCEQGIGAGAAFYNIPIPMTALRQQ"
     gene            complement(1730..2278)
                     /locus_tag="VEV83_18470"
     CDS             complement(1730..2278)
                     /locus_tag="VEV83_18470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47170.1"
                     /translation="MKKYLFVSFALCVSFFSCKKDSESPTPQTTFQLKLNGTLTTFNI
                     NSATLIRSTATDQKRLDIVGTSEDGQTVFVLTVGEETASGDGVSVGQHDVRLFNDDNP
                     DTPEDESIDTDAYVTLSFYSGSTLITDTYAENGDITITGNDEGAHTVSGNFQQTLASL
                     TGGTDYTISEGSFNNIQYTVVN"
BASE COUNT          724 a          539 c          549 g          639 t
ORIGIN      
        1 ggatcaacga gggcacggca gtttcacaca tgaacgtcaa tttcttactg ttgcctcagc
       61 gcggtcattg gtatcggaat attataaaat gcagcgccgg caccaatgcc ttgttcgcac
      121 gaattgggcg gcgtagtgca aacagttctc gtcccttcac actcagcagc ccagaacata
      181 tatcctaaca tgccgggcgt tgtgcctgca ccattgggcg caactgattg cacataactg
      241 cctgtgctct tctgaagtga attattaaaa tcggtgcact ccggcaaaat tttgctgccg
      301 gtgagccata agctgccagt aaatttcgct ggcgcgagtg gcggaatagg cggcgcatat
      361 tgaggtttgc catctacatg ttcctgccag ttggcaatcg catcggaagc actgcgcggc
      421 tgccgcgaag gcaccatcgc gtttgcataa tcgagtaccg gagcattggt cttcagccaa
      481 tcagcggtgg ctttctgaca aatgccgatg agccaacgat caccagccgc taaatcgatg
      541 gtaagcctcg ccgtttgatc atttcccgtt gcatcgtaag gatgaacggc ccgatatgca
      601 gttatgaagt tttgaaggcc ggtaaggttg ggacttgaat tttcttcata atcaatttcg
      661 atcccaacgc cgaggtttgt tgcaagagcg gccgccctcg atcccagcag tgttccgttt
      721 tgggcaagcg cggtattcca gtcttttacg aaagtgatac cgccgatgga cagcatgacg
      781 cggatgcctc tgctcttaaa atagttgaca atatcggagg tcataccttt cggcacaccg
      841 tttacagttc cggcatcatt cgtttgattc aacagcttca aggggttcac aaaactcaat
      901 atcaccacat tcaccgacgg ctttccgctt ccatcacccc gatcgatgag ccaatgattt
      961 tttgagtcga attcagtaac ggtgcgaacg gtggcccagg tacaggcatc attgccagca
     1021 tgccatacac cgtatacttg tatcggtgtg gttgccagcg acgcatcaga cgcgctttgc
     1081 gatccggacc tggatgaggc gtcactaatt ttctgacaac cataataaac aaaaaaacct
     1141 gcaacgaata acgtagcaag tgcgatcagt agattttttt tcatggcaaa caatttacag
     1201 gtgagaagat gtgctgttcg gcaagcgagc agttaccaaa tataaaaaat ctaaacaaac
     1261 ggcaatcaaa ttgtaagaac caaggaagta aaaaatgcaa gaaccaaaaa tcaagaagca
     1321 aagaagagaa gaacaaaaat tccaaaaatc aaagaccaag aatcaaaaaa cggaagacaa
     1381 aattagtggg ccatgaatca aaaaaaagaa agtcaagaac caaaaatcaa gaatcaaaaa
     1441 caaaaaaaaa tcaagaacca aaaaggtgaa gaaaagaaat gttcaatcga ccatttgttt
     1501 ttcttcattt taaatttgag atctatttgg aacttgttat ttggatcttg tagcttggaa
     1561 tgtgctactt gcaacttgca acctttttca caagtgttga actataaaaa ttcgacgtgg
     1621 catcaacacg ttaagtgatt gaattctgtg tgcagtttgc gtggctgcaa ccgtcaaaca
     1681 aaaaaggccg gaacaaatgc ccggcctaat catcataaca tgtttgccgt taatttacga
     1741 cagtgtattg gatgttatta aacgagcctt ctgaaatcgt ataatcagtg ccgccggtta
     1801 agcttgcaag cgtttgctga aaatttccgg acactgtgtg tgcgccttca tcattgccag
     1861 tgatcgtgat atcaccgttc tctgcatatg tgtctgttat taacgtgctg cccgaataaa
     1921 atgataatgt tacgtatgcg tcagtgtcta tgctttcatc ttccggagtg tcggggttat
     1981 cgtcgttaaa cagacgtaca tcgtgctgac cgactgagac accatctccg gacgctgttt
     2041 cctcaccgac ggttaagaca aagaccgtct gcccatcttc tgaagtaccg acgatgtcaa
     2101 gccttttttg gtcagttgct gtggatcgaa ttaatgttgc tgaattgata ttgaaagtgg
     2161 taagagtgcc gtttagtttt aattggaagg tagtctgcgg cgttggggat tctgaatctt
     2221 tcttacacga aaaaaatgaa acgcatagtg caaaggatac gaaaagatac tttttcataa
     2281 acagtaattg agttgattaa ttttttaaaa atttagcgat caggactcaa aaatagtttc
     2341 ttcactacgc cgctgcaaat ttttttaaaa aggtgtaggc ggccctctga aacaaatgat
     2401 caatcccaga agccagcgcg aaaaataaag tctcctcgat cgcacgagta a
//
LOCUS       DASQJI010000679         7208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_706966,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000679 DASQJI010000000
VERSION     DASQJI010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7208
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706966"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VEV83_18475"
     CDS             complement(<1..659)
                     /locus_tag="VEV83_18475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47171.1"
                     /translation="MKIFVARISFILLQFIVVCDGHGQSYSGIVDTSALPQMGPSHYQ
                     DEYDIDAPVHPEAWAKQKSGMHVAFGSEDTLYFRTEVPQLKNENTLWDATGWRGERLN
                     AQIVVWSPDTLQQVRFTISDLKNAKGKVLSKQNLQLNKVCYVLANFPYGSPEPNCNGT
                     PYKNGFLMPDRFAPMASGVDRFDVPGKTVRPVWLSLNIPRDAEAGTYNGTVDVQSKNA
                     HA"
     gene            complement(931..1992)
                     /locus_tag="VEV83_18480"
     CDS             complement(931..1992)
                     /locus_tag="VEV83_18480"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HYK47172.1"
                     /translation="MELLTEIPVRRVTYSRIQEVNFNRLEFGKYVSDHMLVCDYEHGG
                     WHTPHILPYSNLSLSPSTLALHYGQTVFEGMKGFRMDDGRITIFRMERHYERFVRSLD
                     RMCMPAIPRDIFIEGLQQLVELDKAWVPFQPASLYIRPFMFATEATFGVKVSDQYRFI
                     IFTAPVPALFNEPIKVKVETEYTRAAKGGTGFAKCGGNYGGSLYATQKAKAEGYDQVL
                     WTDAHQNKYIEESGFMNVMFVIHNVLVTPPVSDSILDGLTRDSLLTLAKDLDIKTEER
                     SISINELQNAFERGKLTEAFGTGTAAVVAPIKTIGINGKDLHLPAYNTDSLMNKLKHE
                     LESIRLGLTDDRHGWNDIL"
     gene            complement(2008..2529)
                     /locus_tag="VEV83_18485"
     CDS             complement(2008..2529)
                     /locus_tag="VEV83_18485"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK47173.1"
                     /translation="MNRINIIEYAAVHQPYFEKLNRQWIEKWFVMEALDEFVLTKPEE
                     AIVKPGGAILMAEYDGEIAGTVALRKLDPETYEFTKMAVDEQFRRRGIAEKLCYASFQ
                     KAKQLGAKQVVLYSNTKNAAAIKLYEKIGFRHLPVEAGVYKRANVKMIMELDKMETLV
                     AAPNKELNDLIFN"
     gene            2699..4138
                     /locus_tag="VEV83_18490"
     CDS             2699..4138
                     /locus_tag="VEV83_18490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HYK47174.1"
                     /translation="MAKNKFDMGDHIYIQVADGLEKMISDEVLRIGDKLPSVRVLSEE
                     YGISTGTAFQAYYHLEGKGLIESRPKSGYYVRFNHKRFPALPTLRPPDSMSHDVSVKE
                     MIASIYNDIATTGAMNFAMAVPDASLLPSAKLNKSVMYALRNTKDHCINYEHTQGNIE
                     LRKQVARLAFNWGGKIKPDEVIITSGCLEAISICLKTVTNFGDTVAVECPNYFGIYQA
                     VESLGLKVVEISSDPITGFDLGSLQTALKKYPVKAVICVPNFNNPLGSCMPEENKQKL
                     VDIITRYNIPLIEDDIYGELYFGKTRPKTCKFFDKKGLVMHCSSLSKSLTPGYRIGWT
                     VPGQYFEEVKQMKRIQNISSPTITQAAVAHFLMHGRYEYHLKNLRKALHTQCLRYMQA
                     IIEHFPEDTKISRPQGGFVLWLELNKKVNAFKLRTEAIKHHISVVPGKIFTASCGYSN
                     HIRISFGKPWNEDVNYGLMMLGKITKKML"
     gene            complement(4224..4889)
                     /locus_tag="VEV83_18495"
     CDS             complement(4224..4889)
                     /locus_tag="VEV83_18495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47175.1"
                     /translation="MFRPTVLTAFAALFTIAIFAQPAGTSSPDLAKLLREKNIRVANR
                     NITAVHDPQHTNGIHLDEKEGDGVAWLNDISFAKGIIEFDVKGRNMMQQSFVGIAFHG
                     ANDSTMDVVYFRPFNFQSPDPARKAHSVQYVSLPQYDWQKLRTEFPGKYEQPIDQSPQ
                     PSDWFHVRVVVSTPKVSVYVNNNPNASLVVDQLSDRKDGMIGFWVGNNSDGDFANLKI
                     SKE"
     gene            complement(5020..5712)
                     /locus_tag="VEV83_18500"
     CDS             complement(5020..5712)
                     /locus_tag="VEV83_18500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47176.1"
                     /translation="MTDNRSIFSKWMDVISKICTILIPVVLFYLGNEIKKAQDADNKQ
                     QQINNRVSALLKSLSSDNPLERRYAITFSESLAKSGDFPNDLLAVIEEASSTDSAISK
                     QAGNLLDSISQRAGSTKDASVQNQIKQLASNSPTKVYLQIPVGYDMKVAKTLFNDLKN
                     EGYNMLGIEHVDLDKSPKNSEIRYFKKQDNVKANELSQSINKSGFPLPNVTFIPGYEN
                     RVSGSQLEIWLK"
     gene            complement(6020..6781)
                     /locus_tag="VEV83_18505"
     CDS             complement(6020..6781)
                     /locus_tag="VEV83_18505"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYK47177.1"
                     /translation="MTKHSYHLAAVPFVLLLVIASASFGQSQTTPVPKNNPINVVVTG
                     LDHETPDFMLLRQNLETILKVKVYPSYSSDFSTLDFLCDKTPSEIWDKLPQDTKDRFK
                     LIRLEPARIDLAMKDAGTNPGTAQSSDRAKDEQAIADAVQLFQAALLNNNAKAAAPLL
                     SGDFVFNAYGKKMNTEERLASINSGLYKYGPFKKEDVKITRYPNIASVVITTPVKYRN
                     GDKEISVKFSTLTFKKKDEHWLLSGECLLGEGCNK"
     gene            complement(6883..>7208)
                     /locus_tag="VEV83_18510"
     CDS             complement(6883..>7208)
                     /locus_tag="VEV83_18510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47178.1"
                     /translation="NDELRLLYQWQIPLLENELDPEPLTNEIISSLVGNYEGNRKIIY
                     EDGSVFYMNSAGNKEKLEYMGKGIFQNTEKSWLRLVMPFTDKPVSEFEWIWEDGGTPQ
                     KVKRV"
BASE COUNT         2000 a         1555 c         1461 g         2192 t
ORIGIN      
        1 gcgtgcgcgt tttttgactg cacgtcaacc gttccattgt atgtgcccgc ttctgcatca
       61 cgcggaatat ttaatgaaag ccaaaccggg cgaacggttt tgccgggaac atcaaacctg
      121 tcgacaccgg acgccatcgg cgcgaacctg tccggcatca gaaaaccatt tttatacgga
      181 gttccgttac agtttggttc aggtgaaccg tatggaaaat tggcaagtac atagcaaact
      241 ttgttgagct gaagattttg tttactcaac acttttcctt ttgcattttt caaatcgctt
      301 attgtaaaac gaacttgctg taaagtatcc ggtgaccaaa caacgatctg cgcattcaat
      361 ctttcgcccc gccaaccagt tgcatcccat aaggtgtttt cattttttaa ttgaggcact
      421 tcagttctaa aatacaatgt gtcttccgat ccgaatgcca catgcattcc ggatttctgt
      481 tttgcccatg cttccggatg aaccggggca tcgatatcat attcatcctg gtaatgtgaa
      541 ggccccatct ggggaagagc ggacgtatcc actattccgg aatatgactg cccgtgaccg
      601 tcgcatacga caataaattg cagcaaaatg aatgagatcc tggccacaaa aattttcatt
      661 cgactaatgt tttcgtctga tgacaagaat aatccatgaa ggtttacgat aaacacttta
      721 aggtaactaa ttcctggcta aacatgttgc gatcatatcg aatgaatatt cttcatacgg
      781 gaatgtccaa taaaatgaac attgagaatt gagcgtttga atttgactgg gtgaactaac
      841 cgcgaaaaat tgagatctgt tcgcgcatta aattttcaat gctcaaattt tcaactttca
      901 atgttcagtg gagaatcagc gcagcggggt ttaaagaata tcgttccatc catgcctgtc
      961 atctgtcaac ccaagccgga tagattctaa ttcatgtttc agcttattca taagactatc
     1021 ggtattatag gcgggtagat gaagatcttt tccgttgatg ccgatagttt taatcggcgc
     1081 caccacggct gctgttccgg ttccaaacgc ctcggttaat tttcctcttt caaatgcatt
     1141 ttgtagttca ttgatcgaga tggacctttc ttctgtttta atatcaaggt cttttgcaag
     1201 cgttaataaa gaatctcttg taaggccgtc taagattgaa tctgaaacag gaggagttac
     1261 aaggacgttg tggatgacaa acatcacatt cataaatccc gactcttcta tgtatttatt
     1321 ttgatgggca tctgtccaca acacctggtc gtaaccttct gcctttgctt tttgagttgc
     1381 gtacagtgaa cctccgtaat tgccgccgca ttttgcaaaa ccggttcctc cctttgcagc
     1441 cctggtatat tccgtttcca cttttacctt gataggttcg ttgaataaag ccggtacggg
     1501 tgccgtaaaa atgataaagc ggtattgatc agaaaccttg acaccaaatg tggcctcagt
     1561 ggcaaacata aaaggcctga tataaaggct ggctggttga aatggcaccc acgctttatc
     1621 aagttccacc aattgctgca gtccttcaat aaaaatatct cgggggatcg cgggcataca
     1681 cattctgtca agagatcgaa caaagcgttc ataatgtctt tccatcctga atatagtaat
     1741 acggccatcg tccatgcgaa atcctttcat tccttcaaac accgtttgcc cgtaatgcaa
     1801 tgccagcgtt gacggactca aagaaagatt ggaatatggc aagatgtgcg gcgtatgcca
     1861 gccgccgtgt tcgtaatcgc agacgagcat gtggtcagaa acatattttc caaattcaag
     1921 gcgattgaaa ttcacttcct gtatccttga gtaagttacc cggcgcacgg gtatttcagt
     1981 aagtagttcc atattggttt gcttttatca attaaaaatg agatcgttta attctttgtt
     2041 cggcgcagcc acgagcgttt ccatcttgtc aagttccatg atcattttta cgttcgctct
     2101 cttatacaca cccgcctcaa cgggcaaatg cctgaatcct atcttctcgt ataatttgat
     2161 cgcggctgca ttttttgtgt ttgaatacag gaccacttgt ttcgcgccaa gctgtttggc
     2221 tttttgaaag ctcgcataac acaacttctc agcgatccct cttcggcgaa attgttcgtc
     2281 aaccgccatt tttgtaaact cgtatgtctc cggatctaac tttcttaatg caacagtgcc
     2341 ggcgatttca ccgtcatatt ccgccatcag gatcgctccg cctggcttca ctattgcttc
     2401 ttcaggcttg gtcaatacaa attcgtctaa ggcttccatc acaaaccatt tttcaatcca
     2461 ttgcctgttt aatttttcaa aatacggttg gtgaaccgca gcgtattcta tgatgttgat
     2521 tcgattcatg tccgcggttt tatgcgttca ataatttgtg tttctctaaa cccacgccgt
     2581 aagagccaac tcttttgcgt ttcgttcatc acatttttat tatgatcatg caaatttttt
     2641 taaaatttgt catttaaaac agattcagtt tttttatttt tgactatatc agatttttat
     2701 ggcaaaaaat aaattcgata tgggcgacca catttacatc caggttgcag acggtttgga
     2761 aaaaatgatc tcagatgaag tgttgcgcat cggcgacaag cttccttcgg tgcgtgtatt
     2821 aagtgaagaa tatggcatta gtaccggtac agcgttccag gcctattatc atttggaagg
     2881 aaaaggcctg atcgaatcaa gaccaaaatc gggatactat gtccggttca atcacaaacg
     2941 ctttcccgca ttgcccacac ttagaccacc cgattctatg tcgcacgatg tgagtgtgaa
     3001 agaaatgatc gcgtcgatct acaatgatat cgcaaccact ggtgcgatga attttgcgat
     3061 ggcggtgccg gatgcgtctt tacttccatc ggcgaagctg aataaatcag ttatgtatgc
     3121 gcttcgaaat acgaaagatc actgcatcaa ttatgaacat acgcagggta atatagaatt
     3181 gcgcaaacag gtggcgagac tggcatttaa ctggggcgga aaaataaagc ctgatgaagt
     3241 gatcattacc tcaggatgtt tggaagccat ttccatctgt ttaaaaactg tcactaattt
     3301 tggcgatacg gtcgcggtgg aatgcccgaa ttattttggc atataccagg cagttgaaag
     3361 cttaggatta aaggtcgtag aaatttcttc ggatcctata accggcttcg atcttggttc
     3421 cctgcaaacg gcgctaaaaa aatacccggt caaagcagtc atatgtgtac ccaatttcaa
     3481 caatccgctc ggcagctgta tgccggagga aaacaaacaa aaactcgttg atatcattac
     3541 caggtataac attccgctga tcgaagatga tatttacgga gaattgtatt ttggaaaaac
     3601 acgcccgaag acctgcaagt tttttgataa gaaaggattg gtgatgcatt gctcttcgct
     3661 ttcaaaatct ctcacgcccg gttatcggat tggctggacg gtccccggac aatattttga
     3721 agaagtgaaa caaatgaaac ggatccaaaa tatcagcagt ccaactataa cgcaagccgc
     3781 cgtcgcacac ttcttaatgc atggccgtta cgaatatcat ttaaagaatt tgcgcaaagc
     3841 cttgcatacg cagtgtcttc gttacatgca ggctattatt gaacattttc ctgaggatac
     3901 aaagatctcc cggccgcagg gcggttttgt tttgtggctt gaactgaata aaaaggtaaa
     3961 cgctttcaaa ctgagaacgg aagcaataaa gcatcacatt tcggtagtgc cgggaaaaat
     4021 ttttacggcc agttgcggtt attcaaatca catcaggatc agttttggaa agccgtggaa
     4081 cgaggatgtg aattatggtt tgatgatgct gggaaaaata accaagaaga tgttatgagg
     4141 ttattgggtt attaagatat ttggttattg agctactagg atattgggtt atttggatat
     4201 ttagatattc atgcgcccat caactattcc ttactgatct tcaaattcgc aaaatcgcca
     4261 tcggaattgt tgccgaccca aaaacctatc atgccgtctt ttcgatcact caactggtca
     4321 accacgagag aagcattggg attgttgttg acatatacac tcactttcgg cgtgcttaca
     4381 accacgcgaa catggaacca atcggatggc tgcggcgatt gatcgatcgg ctgttcatat
     4441 ttaccgggaa attccgttct taatttttgc cagtcgtact gcggcaaaga gacatactgc
     4501 acggagtgag cttttcgcgc agggtcgggt gattgaaaat tgaacggccg aaaatataca
     4561 acgtccatcg tgctgtcatt tgcgccatga aacgcaattc ccacaaaact ttgctgcatc
     4621 atattcctgc ctttcacatc gaattcaata attcctttgg caaaagaaat atcattcaac
     4681 catgccacac cgtctccttc tttttcatca agatgaattc cgtttgtgtg ctgcggatca
     4741 tgtacggcag tgatattgcg attggctact ctgatgttct tttcccgcag caacttcgcg
     4801 agatccggcg aactagtacc ggcaggctgt gcaaatatag ctatcgtgaa taaggccgcg
     4861 aacgctgtca atacggttgg acgaaacata gagcaatatt tacggggcaa aattaaggaa
     4921 cgggtcagca gaaactaata tttaccgtgt ggaaactcgt tgttggcggc aacaccaaca
     4981 aggctgcgga acaagacttt gcaaagaaac aactcgcact tattttagcc agatttctaa
     5041 ttgggaaccg ctaactcgat tttcatatcc tggtataaaa gtaacatttg gtaatggaaa
     5101 gcccgatttg tttatacttt gtgataactc gtttgccttg acattgtctt gttttttaaa
     5161 gtatcttatc tcactatttt taggagattt atctaaatct acatgttcaa tgcccagcat
     5221 attatatcct tcatttttta agtcattaaa gagtgtcttt gcaactttca tgtcataacc
     5281 caccggtatt tgcagataca cttttgttgg tgaattacta gccaactgtt taatttgatt
     5341 ttgaacagaa gcgtctttag tactacctgc tctttgactt atagaatcca gtaaattacc
     5401 agcttgtttt gaaatcgcag aatcagtgga agaagcttct tcaattacag ccaacagatc
     5461 gttaggaaaa tctcccgact tcgcaagact ttctgaaaat gttattgcat accttctttc
     5521 taaaggatta tcgctactta aagattttaa taaagcagaa acacgattat tgatctgctg
     5581 ttgtttgttg tcagcatcct gagctttttt tatttcattt cccaaataaa aaagaacaac
     5641 tggaataaga atcgtacaaa tctttgaaat aacatccatc cattttgaga aaatgcttct
     5701 attgtcggtc atcaggatat cattaaatgt taaaagatag ttttacctac aatatacaat
     5761 aaattctttt tatttttttt ggcttgagtg aaccaatatt aattacctcc ggagactacg
     5821 cccgaacgac cgaacattct gcgagtcgct tgcgaaatcg gaggcaccca aagagctgta
     5881 gacaatttac gcacattggc gttagaagga aaagcacaac gacaatacag attatcgcct
     5941 gtgaacgcat gcgttattgg cattaatcgc attagagcca ttagaacttg cggtcgccat
     6001 cttcgcaata cctttttcat tatttgttgc atccttctcc aaggaggcat tcgcccgaaa
     6061 gcaaccaatg ttcatctttt tttttgaacg ttaaagtgga gaacttaaca gatatctcct
     6121 tatcaccgtt tctatactta acaggcgttg ttataacaac tgacgcaatg tttggatagc
     6181 gagtaatttt tacatcttcc tttttaaagg ggccatattt atacagcccg gaatttatac
     6241 ttgcaagtcg ctcttctgta ttcatttttt ttccgtaggc attgaaaacg aaatcaccgg
     6301 ataataaggg cgcggctgcc ttcgcattgt tatttaataa tgctgcctgg aatagctgaa
     6361 ctgcgtctgc tatcgcttgt tcatccttcg ccctgtctga cgattgggct gtaccaggat
     6421 ttgtaccggc gtctttcatc gctaaatcaa ttcgtgcagg ttcaagtcgt atcagcttaa
     6481 accggtcttt ggtgtcttgc ggaagtttat cccatatctc agacggagtt ttgtcgcaca
     6541 aaaagtcaag tgtcgaaaaa tcgctgctgt acgatgggta caccttgacc ttgaggatcg
     6601 tttcgaggtt ttgcctaagt agcataaaat caggtgtctc atgatcgagc ccggtgacga
     6661 cgacattaat tggattattt ttcggaacag gagtagtttg cgattgcccg aaactcgccg
     6721 acgcaataac aagcagcaag acaaaaggca cagcagccag gtgatatgaa tgtttggtca
     6781 tgtcgagtac gagtgagtga gaaaatatgg atgaagcaat ttgctcttgc taatttaaaa
     6841 attttctctt tagcatgcaa caacccgcgc caagaattat cttcaaactc tttttacttt
     6901 ttgtggcgtt cctccgtctt cccatatcca ctcaaattca gaaacaggct tgtcggtaaa
     6961 tggcattacc aaacgcagcc agcttttttc agtattttga aaaatgccct ttcccatgta
     7021 ttcaagtttt tccttattac ctgcgctgtt catgtaaaat acagaaccat cttcataaat
     7081 aattttccgg ttcccttcat aattgccaac aagagatgaa ataatctcgt ttgtcagcgg
     7141 ttccggatcc aattcgttct caagtaacgg tatttgccat tgatataaca gccttagctc
     7201 gtcattac
//
LOCUS       DASQJI010000680         3221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_553602,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000680 DASQJI010000000
VERSION     DASQJI010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_553602"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VEV83_18515"
     CDS             <1..569
                     /locus_tag="VEV83_18515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYK47179.1"
                     /translation="RSSVFQPLYRFIYFIPLALMGFRPIDVVFIYSVTQIWGIFVHTE
                     MIKKMGWLEYILITPSHHRVHHASNARYLDKNMGMFLVIWDKMFGTFQPELPEQAYQP
                     IKYGLTKNIEKPNAVNLVFHEWKQMWKDVLQKNITWRQRLHYLFGPPGWSHDGSRFTS
                     DQLRARETHTSYSPKAQEQPADAAVVQW"
     gene            669..2963
                     /gene="gcvP"
                     /locus_tag="VEV83_18520"
     CDS             669..2963
                     /gene="gcvP"
                     /locus_tag="VEV83_18520"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HYK47180.1"
                     /translation="MNLFELQSQEFTQRHIGPNEKETKEMLKVIGVRNMEELISQTVP
                     SSIRMKDDLTLPGGLSESQYLQHIKNVSLKNKIFKNYIGQGYYDTTTPSVILRNVFEN
                     PGWYTQYTPYQAEISQGRLESLLNFQTMVSDLTALPIANASLLDEATAAAEAMTMFFN
                     TLNRDHDHIERGKFFVDNEVFPQTKDVLTTRATPIGIELIFGDYKTAVIDNSFFGAIV
                     QYPNDKGSIEDYREFIHYVHTSGGYVAMATDLLALTLLTPPGELEADCAVGSAQRFGV
                     PLGYGGPHAAFFAAREDFKRSMPGRIIGVSIDAQNNRALRMALQTREQHIKREKATSN
                     ICTAQALLANMAAMYAVYHGPVGLQRIAQRVAVLTQTVADAIETRGFQLVSQNYFDTI
                     TVKVDDVKLFREKAERQRINLRYIDQTCIGISLDETTTIDDLYDLINCFENDVDPVSF
                     SIEEMASPEHIPAFALRNSSYLTHPVFNMHHSESQMMRYIKSLENEDLSLNTSMISLG
                     SCTMKLNAATEMVPLSWNHWSRIHPFAPAEQAGGYQQIIEELSEYLCTITAFDACSLQ
                     PNSGAQGEYAGLLTIKAYHESRGDNHRNVMLIPISAHGTNPASAVMAGMKVVVVKALE
                     NGYIDVSDLRAKASAHAANLAGIMITYPSTFGVYEETIKEITDIVHQYGGQVYMDGAN
                     MNAQVGLTAPGLIGADVCHLNLHKTFAIPHGGGGPGMGPICCKEHLKDFLPGHFYFLN
                     TTRAMLKNKQSIFNDQYSTLNAVA"
     gene            3015..>3221
                     /locus_tag="VEV83_18525"
     CDS             3015..>3221
                     /locus_tag="VEV83_18525"
                     /inference="COORDINATES: protein motif:HMM:NF044806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47181.1"
                     /translation="MLGRDGVRKASEYAILNANYMRARLEKDYDILYLGTNGTCAHEF
                     IVDLRPFKKTAEIEAEDVAKRLIDY"
BASE COUNT          932 a          727 c          759 g          803 t
ORIGIN      
        1 ttcgttcgtc tgtatttcaa ccgctgtatc gtttcattta ttttatcccg cttgcgctca
       61 tgggttttcg tccgatcgat gttgtattta tctattctgt tacgcagatc tggggcattt
      121 ttgttcatac tgaaatgata aaaaagatgg ggtggcttga atacattctt atcacgccat
      181 cgcatcaccg ggtacatcat gcttcaaatg caagatatct tgataagaac atgggaatgt
      241 tcctcgtgat ctgggacaaa atgtttggaa cgtttcagcc ggaattgcct gaacaggcct
      301 atcagcccat taaatatgga ctgacaaaaa atatcgaaaa gccaaatgca gtaaacctgg
      361 tcttccacga gtggaagcag atgtggaaag atgttctgca aaaaaatatc acttggcggc
      421 agcggttgca ttatctattc ggaccacccg ggtggagcca cgacggcagt cgctttacca
      481 gcgaccaatt gcgggccagg gaaacacaca catcatactc accaaaagcg caggagcaac
      541 cggcagatgc agccgttgta caatggtagc cgtttaagaa tttcattttc ttaatttatc
      601 ggaataacaa tcgttagcct gtacctttgc gcatccaatt ttatcattaa ctataactcg
      661 gatcttgaat gaatcttttt gagctgcagt cgcaggaatt cactcagcgg catatcggtc
      721 ccaacgaaaa ggaaacgaaa gaaatgttga aagtgatcgg cgtcagaaac atggaggagt
      781 tgatcagcca aacagtgcct tcgtctattc gcatgaaaga cgatctaacc ttgcccggcg
      841 gtttgagcga aagccaatat ttacagcaca taaaaaatgt ttctcttaaa aacaaaatct
      901 tcaaaaacta catcggccag ggatattacg acactacgac cccatcagta atcttacgca
      961 atgtgtttga aaatcccggc tggtacactc aatacacacc ttaccaggcc gagatatcac
     1021 agggccgcct tgaaagtttg ctcaattttc aaacaatggt gagcgatctt accgcgctac
     1081 ccatcgccaa tgcttctttg cttgatgagg caaccgccgc agcggaagcg atgacgatgt
     1141 tctttaatac actgaaccgc gaccacgatc atatcgaacg cggaaaattt tttgtagaca
     1201 atgaagtatt tcctcaaacg aaagatgtac ttactacacg agctacacca ataggcatcg
     1261 aattgatctt tggtgattac aaaacggcag tgatagataa ctcttttttt ggagcgatcg
     1321 ttcaatatcc gaacgacaaa gggtcgatag aagattaccg ggaatttatt cattacgttc
     1381 acacgagcgg aggttatgta gccatggcga ccgacttgct tgcactgact ttattgaccc
     1441 ctcccgggga attggaagca gactgcgcgg tgggttccgc tcaacgcttt ggagttccac
     1501 ttggctacgg cggtccgcac gccgcgtttt tcgccgcaag agaagacttt aagagaagta
     1561 tgcccggcag gatcataggc gtgagtattg acgcgcagaa caatcgtgcg ctgcgcatgg
     1621 cactgcaaac aagagagcag catatcaaac gggaaaaagc aacttcaaat atttgtaccg
     1681 cccaggcatt gctcgcaaac atggcagcta tgtatgcggt gtatcatgga cccgttggat
     1741 tacaacggat cgctcaacgc gtcgcggtat taacacaaac tgttgcagac gcaattgaaa
     1801 cgcgcggatt tcaattggtc tcgcaaaatt attttgatac gatcacagtc aaagtggatg
     1861 atgtaaaact gttccgcgaa aaagctgaaa gacaaaggat caatctcagg tatatcgatc
     1921 aaacctgtat cggcatctca ctggacgaga caaccacgat cgatgatctg tatgacctga
     1981 taaattgttt tgaaaacgat gttgatcccg tcagcttttc gattgaagaa atggcgagcc
     2041 ctgaacacat tccggcgttt gcactgcgca attcttctta tttgacgcac ccggtcttta
     2101 atatgcacca cagcgagagc cagatgatgc gttacataaa atcgttggag aatgaagatc
     2161 tctcattaaa tacatccatg atatcgctcg gcagctgcac aatgaagcta aacgcagcga
     2221 cggaaatggt gcctctaagc tggaatcact ggagcagaat ccatccgttt gcgccggcag
     2281 agcaggcagg cggatatcag cagatcatcg aagagctttc ggaatatcta tgcacgatca
     2341 ccgcgtttga tgcctgcagt ttgcagccga acagtggggc ccagggcgaa tatgcaggct
     2401 tactcacgat aaaagcgtat cacgaaagtc gcggtgataa ccatcgcaac gtcatgctta
     2461 tccccatatc cgcacatgga accaatcctg cgtctgcggt gatggctggg atgaaagtcg
     2521 ttgtcgtaaa ggctttagag aatggttata tagatgtgag cgacttgaga gcaaaagcat
     2581 cggcgcacgc cgcaaatctt gcggggatca tgatcactta tcccagcact ttcggcgtgt
     2641 atgaagaaac gataaaagag atcacagata tagtgcatca gtatggcggt caagtttaca
     2701 tggatggagc gaacatgaat gcgcaggttg ggttgactgc gccgggtcta atcggcgctg
     2761 acgtttgcca tctcaacctt cataagacct ttgccatccc acatggtggc ggtggtccag
     2821 gtatgggccc gatctgctgt aaagagcatc ttaaagactt cctgcccggg catttttatt
     2881 ttttgaacac tacgcgggcg atgttaaaaa ataaacagtc aatattcaat gatcaatatt
     2941 caacgctcaa tgctgtcgct taagcaccgt acggttcggc atcgatcctc ctgatcagtt
     3001 atgcttatat aagaatgctg gggagagacg gcgtaagaaa agcgagtgaa tatgcgatat
     3061 taaacgcaaa ctacatgcgc gcaagactcg agaaagatta tgacatcttg tatctcggaa
     3121 caaatggaac atgtgcgcat gaatttatag ttgatctgcg gccatttaag aaaaccgcag
     3181 agatcgaagc tgaagatgta gcgaagcgac tgatcgatta t
//
LOCUS       DASQJI010000681         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1168145,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000681 DASQJI010000000
VERSION     DASQJI010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1168145"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VEV83_18530"
     CDS             <1..189
                     /locus_tag="VEV83_18530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HYK47182.1"
                     /translation="VNYARFLNIDAENALERTNKKFIYRFTRMETIASDAGKKLHEMT
                     LDEMDGIWNIVKKENNPS"
     gene            186..>1756
                     /locus_tag="VEV83_18535"
     CDS             186..>1756
                     /locus_tag="VEV83_18535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47183.1"
                     /translation="MIATIKNAVTKHAWLFLAAAWLYTLSFIFTNYLSYSSSAEKVAK
                     ILSEYIKGQESSFKNILHDTSSVAAIINDAPSKVKEQLASDAQGIFAYQVNDIGNPIE
                     IFWNTNKMAVQDEDLSRKDGHYIVKYQNGTFEFIKTTLTRRNLTYYFCTLIPIRWQYF
                     MENEYLQPKFAVHEEIGNTYEITNASNGSPIRNSDEQIILRVREKNESQTDSPGGFSI
                     FLRVIAIIFFLIFINNVSAETVRRINFVTGFSLLVLLFVALRLIIYFLPFPFHYRTLP
                     FFEPSGDSSVYHGGAINRSLGDLFVNTILLFWLVIFFRKYSKRVLLIKLNISPAVKQA
                     LVSAVFLVIPLISFYVANIISSLVTDSRISFNAADFFSLNIFSFIGFLIICILLYTWL
                     YITGLLVHVSLGSGIGLFWRYILIISWCFLLISVHLFAVESQALLFLTGFILVLITFI
                     EYRNNPSLSSFVGSPYFIFWALVLTAAASGLIISANSSTEKKDRIIMAEAIQQESDSS
                     ETLLLRMAITNFSDK"
BASE COUNT          454 a          375 c          385 g          542 t
ORIGIN      
        1 gtcaattatg cacgattttt gaatattgat gcagagaatg cgctcgaaag aacaaacaaa
       61 aaatttattt atcgcttcac acgaatggag accattgctt cagatgcggg taaaaagctt
      121 cacgagatga cactcgatga aatggacggc atttggaata ttgtaaaaaa ggaaaataat
      181 ccttcttgat cgctactatc aaaaatgcag taactaaaca cgcctggctt tttttggcgg
      241 ctgcctggct atacacgctg tcgttcattt ttacaaatta tttgtcgtat agttcctcag
      301 ccgaaaaggt cgcgaaaatt ttaagcgagt atatcaaggg acaggagagt tcgttcaaga
      361 atattttgca cgatacatca tccgtagctg cgatcatcaa tgatgcgccc tcgaaagtaa
      421 aggagcagct ggcatccgac gcacagggga tcttcgccta ccaggtaaat gatatcggca
      481 acccgataga gatcttttgg aacacgaata aaatggcagt acaggacgaa gatctttcca
      541 ggaaggacgg ccattatatc gtgaagtatc aaaacggaac gtttgagttt ataaaaacta
      601 cgctcacgcg caggaacctc acctattatt tctgcacgct tatcccgatt cgatggcagt
      661 atttcatgga gaacgagtac ctgcagccca agtttgctgt gcatgaggag atcggtaaca
      721 cctacgaaat aacgaatgcc agcaatggct caccgattag aaactccgac gagcaaatta
      781 tcctgcgcgt tcgtgagaag aacgaatcgc agacggattc gccgggtggc ttttccatct
      841 ttctaagggt aattgccatt atcttctttt tgatctttat aaacaacgtc agcgctgaaa
      901 ctgttcgacg gatcaatttt gtcaccggct ttagcttgct cgtgttgctg tttgttgcgt
      961 taagactgat catttatttt ctgccgttcc ctttccatta tcgcacattg ccattttttg
     1021 aaccttcagg tgactcgtct gtatatcacg gcggagcgat aaaccgctcg ttaggagact
     1081 tgtttgtgaa taccatactt cttttctggt tggtgatctt cttcaggaag tattcaaaaa
     1141 gggttttact gataaagttg aatatctcgc cggctgttaa acaagcgctc gtctccgctg
     1201 tgttcctcgt gatcccgttg ataagctttt atgtagcgaa cattatcagc agtctggtca
     1261 ccgattcgag gatcagcttt aatgcggccg atttcttttc attgaatatt ttttctttta
     1321 ttgggtttct cattatctgc atactgcttt atacgtggct ctacataacc ggcctactcg
     1381 tgcacgtttc tttggggtcg ggcataggtt tgttttggcg ttatatcctg atcataagct
     1441 ggtgcttcct gcttatttcg gttcatttat ttgcagtgga gtcgcaggcg cttcttttcc
     1501 tgactggttt tattttggtg ttgataacat tcatcgaata ccgaaacaat ccgtcgcttt
     1561 catcatttgt aggctcacca tactttattt tctgggcatt ggttttaacc gccgcggctt
     1621 ctggcctgat catttctgcc aacagtagca cggaaaagaa agaccgtatt ataatggcgg
     1681 aagcaattca gcaggaatca gattcgtcgg aaactttgtt gttgcggatg gccattacaa
     1741 acttttccga caagtt
//
LOCUS       DASQJI010000682         5439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1784580,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000682 DASQJI010000000
VERSION     DASQJI010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784580"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VEV83_18540"
     CDS             <1..397
                     /locus_tag="VEV83_18540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HYK47184.1"
                     /translation="HPVILFDGVCNLCTGSVQYVIRHDPKRLFRFASLQSEFGQKILS
                     DHQLPANTFNSFMLLDGEKIYTRSTAALLVAKKLRGAVKLLYAFMIVPKFIRDVVYNM
                     IAKNRYRWFGKKNECWLPTPELKSLFIDQ"
     gene            complement(429..1169)
                     /locus_tag="VEV83_18545"
     CDS             complement(429..1169)
                     /locus_tag="VEV83_18545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK47185.1"
                     /translation="MKIIPLSEGVFTVDKTKVFIPFDQTKDELQARRSGSLLVEVQPF
                     VVITRKDVLLLDTGLGFMKDAEMQLHKNLAANQIQPTDITKVLLSHLHKDHAGGISYK
                     DQLGHYHLAFSNAIYYLQQAEMDFAMDIGFPSFMTEEISILRDNSRAVFLTEEDGTID
                     GYIQYKVTHTHSPHHQVFWIEEGNEKIFFGADDAPQLQQMKHRFIAKYDYDGKKAMEL
                     RTQWWREGAEQGWNFLFYHDVKTPVYKV"
     gene            1360..2058
                     /locus_tag="VEV83_18550"
     CDS             1360..2058
                     /locus_tag="VEV83_18550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HYK47186.1"
                     /translation="MNSFIASGIKSQVNKRVQPANRTIHKLLLFAGIASSLLYVLMNI
                     LCPLLYVGYDSVSQTVSELSAIDAPTRPIWVPLGLAYTLLLVAFGLGVWRSSAENRSL
                     RIVGALFAIHGFIGLFWPPMHQREVLAAGGGTMTDTMHILFAMVTVPLMALEIGFGAA
                     AFGKRFRIYSIISLAILMVFGILTGLDGPAIGKNLPTPFIGIWERINIGVFLLWVVVL
                     GIVVLRMEERFVNK"
     gene            complement(2156..2938)
                     /locus_tag="VEV83_18555"
     CDS             complement(2156..2938)
                     /locus_tag="VEV83_18555"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYK47187.1"
                     /translation="MNTVIVPVDFSDISLNAARYAVKLLTGHPEVQIILYHAYDNPYA
                     EENTLENLSKFKEELLQNREANITVLAEHGDFLTELEKLARHRQADLIVMGITGKSSL
                     AQVFMGSNALKMAENKFCPVMIIPSNAVYSEIKNVLLTTDLKNVVSTTPSAPIKKILS
                     TFNAKLHIVNVNSEHYIELSEDYAAELQKLKDMFPDADPEFYFLRLYDVDDAINTFAH
                     DKNIDLIITVHKEHSMVHKLFMTSHTKKLAYQSTVPVVVVHE"
     gene            3132..4460
                     /locus_tag="VEV83_18560"
     CDS             3132..4460
                     /locus_tag="VEV83_18560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HYK47188.1"
                     /translation="MTSSFLQSSGFLLLGIAVIVLLTAKFRVHAFFALLVACFVTGLG
                     VQMPAAEIITTIEDGFGRIMRSLALIIVLGTTLGVLLEHTGSTRVMANAILKRTGQRN
                     AALAMSLTGFIVGMPIFCDSGYIVLNGLNKSLAKRTGISIAVMSVSLATGLLSVHCLI
                     PPHPGATAAAGVIGVDVGQLIMYGIVTAIPAMLIGFWWATYAGKKTPPITVEEEIFPA
                     AQSHPPSTLKAFLPVVVPIILIAVRSFLFIGKQDSGWLNIFSLAGDPVIALSIGILLA
                     FLSIPNWKKTTVSKLLSEGAEKAGGILIIIGAGGAFGAVLAATKIGDHFSQAISLGSL
                     GLLFPFLLTSLLKTAQGSSTVAIITAASIIQPLLVPLGLDSEHGKLICVLSMGAGSMM
                     ISHSNDAYFWVISKFSGLDMRTMLKVYSFATLLMGLVTLLTVYILSLFLL"
     gene            4463..>5439
                     /locus_tag="VEV83_18565"
     CDS             4463..>5439
                     /locus_tag="VEV83_18565"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HYK47189.1"
                     /translation="MNILIAPNAFKNSLDAASVAAAIETGLLRSTLKCDCIRFPVGDG
                     GDGTAEILVQRFEGRKMSRKAQDPLGRTIGVEFGLIEENKTAVIEMADVSGLKLLKGK
                     ELDPLHATSFGTGELIRNALDKQVKKIILCIGGSATVDGGTGALRALGIRFLDQGNNV
                     LNSLPAELNDLATIDLSALDKRIFNCEIVVLCDVENALLGEHGAAKIFGPQKGATEAD
                     VQKLETALNQFCDIVLQQAGKDMASIRHGGAAGGIAASFATLLNAELVNGIDYFLNIT
                     EFDKALTETDLVITGEGSIDEQTLRGKGPYGVAKRAKQKGVPVIALAGR"
BASE COUNT         1453 a         1205 c         1245 g         1536 t
ORIGIN      
        1 acatccggtt attctcttcg acggagtttg caacctctgc acgggtagcg tacaatatgt
       61 gatcaggcac gatccaaaaa gactgtttcg ttttgcttca ctgcaatctg agttcgggca
      121 aaaaatattg agtgaccatc aactccccgc aaataccttc aattcgttta tgctcctgga
      181 cggcgaaaag atatatacac gttcaacggc cgcactgttg gttgcaaaaa aactaagagg
      241 cgcagtaaaa ttgttatacg cgtttatgat agtacccaaa ttcatccgcg atgttgttta
      301 taatatgatc gcaaagaacc gttaccgctg gtttgggaaa aaaaatgaat gttggttgcc
      361 tactcccgag ttgaaatcat tattcatcga ccaataactt caaaccaaaa acgttcaaac
      421 ttcaaacctc aaactttata tacaggcgtc ttcacatcat gatagaataa aaaattccat
      481 ccctgttcgg caccttcccg ccaccattgc gtgcgtaatt ccatcgcctt ctttccatcg
      541 taatcatatt tcgcgataaa ccggtgcttc atttgttgca gttgcggggc atcatctgcg
      601 ccgaagaaaa ttttttcatt tccttcttcg atccaaaata cctggtgatg cggactgtgc
      661 gtgtgtgtga ctttgtactg aatgtatccg tctatcgtgc catcttcttc cgtcaaaaaa
      721 actgctcttg aattgtcccg caggattgag atctcttcgg tcataaaaga tgggaacccg
      781 atatccatcg caaaatccat ttcagcttgt tgcaaataat agatcgcgtt gctgaatgcc
      841 aggtgataat gcccgagctg atctttataa cttatcccgc cagcgtggtc tttgtgcaaa
      901 tgagaaagca aaactttcgt aatgtctgtt ggttgtattt ggttagctgc aaggttttta
      961 tgcaactgca tttctgcatc cttcatgaat ccaagacctg tatcaagtaa caatacatcc
     1021 tttcgggtaa taacaacaaa tggctgtact tccacaagca aactgcccga acgacgagcc
     1081 tgcaactcgt cctttgtttg atcaaacgga atgaaaactt ttgttttgtc aaccgtaaat
     1141 acgccttcag acaggggaat aattttcatg caggcaaatt agaatattta caactgcaaa
     1201 atctatgacg acctgaccct tggaaccctt tgcgcgttaa aatagtctta gcaagcactc
     1261 gaaactctga ccttcgtcat atcaaaattt aaagaattgt aagaccttgc ttagaagtgt
     1321 acttgccgta atatttgttc aattatttaa acaccaaata tgaattcttt cattgcatcc
     1381 ggcattaaat cgcaggtgaa caaaagagtt cagccggcga atcgaactat acataaacta
     1441 ttgctttttg caggcatcgc ctcttccttg ctttatgttt tgatgaacat actgtgcccg
     1501 ctattgtacg ttggctacga ttctgtctcg caaacagtca gtgagctgtc agcaatagat
     1561 gcgcccaccc ggccaatatg ggttcctctt gggctcgcgt acacattgtt gcttgtcgct
     1621 ttcggtttgg gtgtgtggcg atcatctgcc gaaaaccggt ccctccgcat tgtgggagcc
     1681 ctctttgcta ttcacgggtt tattggtctt ttttggccgc caatgcatca acgcgaagtg
     1741 cttgcggcag gcggcggcac aatgaccgat acaatgcaca tccttttcgc aatggtaaca
     1801 gtaccattaa tggcacttga aattggtttt ggcgccgcag catttggaaa acgtttccga
     1861 atctattcta tcataagcct ggcgatctta atggtcttcg gtattttaac cggcctcgat
     1921 ggaccagcta taggaaaaaa tttaccgaca ccgttcattg gaatatggga gcgcatcaac
     1981 atcggtgttt tccttttatg ggttgtggtt ttgggaatcg tcgtgctcag gatggaggag
     2041 cgcttcgtaa acaaataaca ttgcggaaat ctataaagat cacgaacgcc catgcgggca
     2101 tgcaagtcaa ttcgaatgaa gaactggtaa gtaaaagatt gagtctggcg ccaacttatt
     2161 catgcaccac caccaccggt accgtacttt gataagcaag tttcttcgtg tggctggtca
     2221 taaaaagctt gtgcaccatt gaatgttctt tgtgcacagt gatgatcaag tcaatatttt
     2281 tatcgtgtgc aaacgtgttg atcgcatcat ccacgtcata taaacggaga aaataaaatt
     2341 ccgggtcagc atccgggaac atgtccttca acttttgcaa ttctgcagca taatcttcag
     2401 aaagctcgat ataatgttcg ctgttcacat ttacgatgtg cagcttggcg ttgaacgttg
     2461 ataatatctt ttttatcgga gcggaagggg tcgtgcttac tacatttttc agatcggttg
     2521 ttaaaagaac gttcttgatc tcgctgtaga cagcgttaga aggaattatc atgacggggc
     2581 agaacttgtt ctctgccatc ttcaatgcgt tgcttcccat aaatacctgg gctaaagacg
     2641 atttgccggt gatgcccatt acgatcaggt cggcctgccg atgacgggca agcttttcaa
     2701 gttctgtaag aaaatccccg tgttcggcaa gtacggttat gttagcctcc ctgttttgca
     2761 ataattcttc tttgaatttg ctcaaatttt cgagcgtgtt ctcttcggcg tacgggttat
     2821 cgtaggcgtg atataaaatt atctggacct ccgggtgtcc tgtgagcaat ttcaccgcat
     2881 aacgtgccgc atttaacgaa atatcggaaa aatctacagg aacgataact gtattcatac
     2941 ttctttggtt tgattagaaa ataagcaaaa caatggcgaa acgaatataa catcaatttg
     3001 aaaattgaag tcatagatta atagatttta ttacttaacg acggctgaaa tttattcggc
     3061 agactgaaaa cgtacggttt acaagcgttt gaagtcgcgg gttttgttat cttgtactcc
     3121 atccgaaact aatgacatca tcattcctgc agtcatcagg cttcctgtta ctcggcattg
     3181 ccgtgatcgt actactcact gcaaaattcc gggttcacgc ttttttcgct ttgctggtcg
     3241 catgttttgt tacgggtctg ggagtccaaa tgcctgcagc ggaaatcata accacaatag
     3301 aagatggatt tggcaggatc atgagatcgc tggcactcat cattgtattg ggaacaacgc
     3361 ttggcgtgtt actcgaacac accggcagca ccagggtgat ggcaaacgca atactgaaaa
     3421 gaacaggcca acgcaacgca gcattagcga tgagcctgac cggctttatc gtgggcatgc
     3481 cgatcttctg cgattcagga tacatcgtat tgaatggatt gaataaatcg ctcgcaaaac
     3541 gaaccggtat ttcgatcgcc gtcatgagcg tatcgctggc aacgggtttg ttgtctgtgc
     3601 actgcctgat accgccgcac ccaggtgcca ctgcagccgc tggtgtaata ggtgttgacg
     3661 tcggtcaatt gataatgtat ggcatcgtta cagcgatccc tgccatgctt atcggatttt
     3721 ggtgggcgac ctacgctggc aaaaaaacac ctccgataac tgttgaggaa gaaatatttc
     3781 cagccgcaca gtcccatcct ccatcaacat taaaggcatt tttacctgtc gtcgttccca
     3841 tcattctgat tgccgtaaga tcttttttat tcatcggcaa gcaggactcc ggttggttaa
     3901 atatcttttc gctggcgggc gacccggtga tcgcattgtc gatcggtatc ctgctcgcgt
     3961 tcttgtcaat tcctaattgg aagaaaacaa ccgtcagtaa attactgtcg gaaggcgcag
     4021 aaaaagcagg cggaattctt atcatcattg gggctggcgg cgctttcggc gccgtgctgg
     4081 cggcaaccaa aattggcgac catttcagcc aggcaatctc tttgggtagt ctcgggctct
     4141 tattcccatt cctgcttact tcgcttctca aaacagcaca gggttcttcc acggtggcga
     4201 tcattactgc tgcttccatc attcagccat tattagtacc gctgggatta gactcggagc
     4261 acggaaaatt aatttgcgta ctgtcgatgg gcgccggctc aatgatgatc tcccattcca
     4321 acgacgcata tttctgggtg atctcgaaat tttctggcct tgatatgcga acgatgctga
     4381 aagtttattc attcgcaaca ttgctaatgg gattggtgac cttgctgacc gtctatattt
     4441 tgtcgttatt cctgttataa atatgaatat actcattgcc cccaacgctt ttaagaatag
     4501 tttggatgct gcgtctgttg cggcggcaat tgaaacaggg ctgctgcgaa gcactttgaa
     4561 atgcgattgc atccgctttc ctgttggcga tggcggcgat ggaactgcag aaatcctggt
     4621 tcaaagattt gaaggaagaa agatgagcag aaaggcacag gacccgttag gcagaactat
     4681 aggagttgaa tttggattga tagaggaaaa caaaactgcg gtgatcgaaa tggccgatgt
     4741 ctcaggatta aagttattga agggtaaaga attagatcca ctgcatgcaa caagttttgg
     4801 gacaggcgag ctgataagaa atgcactgga caaacaagta aaaaaaatta ttctctgcat
     4861 cggtggcagt gcgacggtcg acggagggac tggcgcactg cgggccttag gcattcgatt
     4921 tctggatcaa ggcaataatg ttttgaatag cctccctgca gagcttaatg atcttgcgac
     4981 aattgacttg tcagcgctcg acaaaagaat ttttaattgt gagatcgttg tgctctgcga
     5041 tgtcgaaaac gcactgcttg gcgaacacgg ggcagcaaaa atttttgggc cacaaaaagg
     5101 cgcgactgaa gcggatgttc agaagctcga aacggcgctt aatcaatttt gcgacatcgt
     5161 tcttcagcaa gccggaaaag atatggcgtc gatcaggcat ggaggcgcgg caggcggtat
     5221 cgccgcaagt tttgccactt tattaaacgc agaattggtg aatggtatcg actattttct
     5281 caacataaca gaattcgaca aagcactaac agaaacggat cttgtaataa caggtgaggg
     5341 aagtattgat gaacagaccc tgcggggaaa agggccgtat ggcgtcgcca aacgagcgaa
     5401 gcaaaaaggt gttcccgtta tcgcgctggc tggaagaat
//
LOCUS       DASQJI010000683        17955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2092504,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000683 DASQJI010000000
VERSION     DASQJI010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 17955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17955
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2092504"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VEV83_18570"
     CDS             complement(<1..185)
                     /locus_tag="VEV83_18570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK47190.1"
                     /translation="MKKLFFSLYFLCIGAILWSQNEQGFQDLFDGKTLNGWKRLVGAG
                     EYTVENNMIVGTTVAGSP"
     gene            386..697
                     /locus_tag="VEV83_18575"
     CDS             386..697
                     /locus_tag="VEV83_18575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47191.1"
                     /translation="MKKIVFAALMLTSVSGFAAFNQHAVSSTVAMKDDGGSKHISASQ
                     VPAAVIESFNAKFPDAKNVQWEVQKEDGGKIYQAEFTQNGKRFKAQFAPDGTFLGKQR
                     T"
     gene            complement(778..2703)
                     /gene="acs"
                     /locus_tag="VEV83_18580"
     CDS             complement(778..2703)
                     /gene="acs"
                     /locus_tag="VEV83_18580"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HYK47192.1"
                     /translation="MPYPYQIRSLEEYQKQYKQSVEQPEEFWGDVAQHFLWKKKWDNV
                     LNWNFMEPKIEWFTGGKLNITENCLDRHAQSNPDQPAIIWEPNDPEEHHRVLTYKDLL
                     EKVCQFANVLKVNGVQKGDRVCIYMGMIPELAIAVLACARIGAIHSVIFGGFSAQSIS
                     DRLQDANAQFIITCDGAYRGAKDIPLKSVIDDALVACPFVKKVIVYTRTHTPISMIKG
                     RDVWWEDEINKVVTLGMKDCPAEEMDAEDPLFILYTSGSTGKPKGVVHTCAGYMVFTN
                     YSFVNVFQYKPRELHFCTADIGWITGHSYIVYGPLSAGATSLMFEGIPTWPDAGRFWN
                     IIDKYKVNIVYTAPTAIRSLMGFGDEPLKGKDLSSLRVLGTVGEPINEEAWHWYDQHI
                     GGEHCPVVDTWWQTETGGIMISNLAGVTPSKASWCTLPLPGVQPVLVDENGHEVTEKD
                     EHGFLKGNLCIKAPWPSIIRTTYGDHERCRKNYFDQFPGLYFTGDGALKDDEGNYRIT
                     GRVDDVLNVSGHRIGTAEVENAINMHSGVVESAVVGYHHEIKGQGIYAYVICSNTHGD
                     DELTRKDIAATVSRIIGPIAKPDKIQFVSGLPKTRSGKIMRRILRKIAEGETENLGDI
                     TTLLDPGVVNDIKNGKV"
     gene            2843..3760
                     /gene="gldA"
                     /locus_tag="VEV83_18585"
     CDS             2843..3760
                     /gene="gldA"
                     /locus_tag="VEV83_18585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated ABC transporter
                     ATP-binding subunit GldA"
                     /protein_id="HYK47193.1"
                     /translation="MSIQVRNLLKKFGEQKAVNDVTFSLDKGDIVGFLGPNGAGKSTT
                     MKMITGYLEADAGEIKVCGMPVKTNAVDVKRKMGYLPESNPLYYDMYVREYLKFVAGI
                     YKIETPKIKIREIIELTGLTVESRKKIGQLSKGYKQRVGLAAALLHEPEVLILDEPTS
                     GLDPNQIVEIRNVIREQGRNKTVLFSTHILQEVQAICDRVIIINKGELVADSPVQELQ
                     LNRRSNGVGVTFSTRISQQKLQDLPAAISVAKTNDHSFRLTTNDTNELRRQLLEFAVA
                     EQLDIVSLQTEGNTLEDIFRSLTTTEISN"
     gene            3782..4450
                     /locus_tag="VEV83_18590"
     CDS             3782..4450
                     /locus_tag="VEV83_18590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HYK47194.1"
                     /translation="MLQPSTLKFLKDLKKNNNKEWFDANRKRYEAAKADFAAFVQGVI
                     DRFCKTDATLSALSAKDCLFRINRDIRFSKDKSPYKTNFGASINAGGKKRVRAGYYLH
                     LEPGQSFVGGGIYMPTPEELKKVRQEIDYNFEEFRKLITNKKFKTIYKDISKDGELSL
                     SRPPKGYDENNPAIEYIKLKSVIAMTPLNDADLTDKKLSAKVVSAFEALYPVIVFINK
                     ALEN"
     gene            complement(4611..5627)
                     /locus_tag="VEV83_18595"
     CDS             complement(4611..5627)
                     /locus_tag="VEV83_18595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HYK47195.1"
                     /translation="MNVHYKKIELPFEYPFTISGGRTKTHQPSLIVALRLGNLVGYGE
                     APAISYYNITVEQMIADLQSKKTMIEKFAFTQPERYWHYLHHLIPQNPFLVCALDIAA
                     WDLFGKMQNQPLYKIWNTQFINTPVTDYTIGIDTIEKMIGKMQQKPWPVYKIKLGTAD
                     DISIVESLRKHTDAVFRVDANAGWGLNEALEKIPILKTLGVELIEQPLAKDNWEEMKI
                     LYERSALALFADESCVFETDVEKCASCFHGINIKLTKCSGITPALRMIKKARELNLKV
                     MMGSMNECTVGSAAIAHFLPQLDYVDMDGPLLLKEDIATGLQYDNGALKISDNPGLGI
                     QVQW"
     gene            5801..7954
                     /locus_tag="VEV83_18600"
     CDS             5801..7954
                     /locus_tag="VEV83_18600"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYK47196.1"
                     /translation="MRKSFPKKFLLATLIFVAGKCFPQSQATDLEKTTDSLAQIVIRL
                     LNEKNADSIYSMMSEHFKASMSYPNFKGVVSEVFSISPFYNVTYKTNQGGINKYRMES
                     KEGSFQILVGLDSNRKVETLEINGYEDESLAPDKYKKQDVMITMRDGVRLHTVIFTPI
                     TEKGALPFILQRTPYGVDDYLSPEKEGYVKDMAEDGYIFVYQDIRGRYKSEGQFEMQR
                     FTRDKKDPKAIDESTDTYDTFDWLLKNIPNNNGKAGMLGISYDGWTTVMGAVDPHPAL
                     VAISEQASPADMFLGDDFHHNGAFRLSYGFEYSFMEEATNTDSLYPFDMYDTYNWYLK
                     LGPLSNVNKKYFFNKLPSWNNFAAHPNYDDFWKKQALATRLDSPRVYTMNVAGWWDQE
                     DFYGPQKAYETWEKNDRSHKNFIVIGPWNHGGWGSGAGNRLGNIDFNSATAETFRKNI
                     QAAWFAYYLKGEGSGNFAEATTFQTGSNTWKTYDRWPPKEAVKKNLYFHESGKLSFEK
                     PVTGEKNFTSYVSDPANPVPYRTRPIEETYGAGSRWYTWLTEDQRFVDKRPDVATFET
                     DVLTDDVTVTGNIFAKLFASTTGSDADWIVKLIDVYPDMYDEDPQMSGYQFMIANDVF
                     RGRFRNSFEKPEPITPNKVESYTIDLHSVNHVFKKGHRIMVQVQSTWFPIIDRNPQKY
                     VPNIFAATESDFQSATQKIYGSVEFSSHIELSVIE"
     gene            complement(8301..8519)
                     /locus_tag="VEV83_18605"
     CDS             complement(8301..8519)
                     /locus_tag="VEV83_18605"
                     /inference="COORDINATES: protein motif:HMM:NF021253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HYK47197.1"
                     /translation="MPIDRNELLSLSAEEKIALAEELWSSVEEKLLPVTDEEIAFAEE
                     RLRLHEMNPQEGMSLAELKSYFEGKYGF"
     gene            complement(8662..11733)
                     /locus_tag="VEV83_18610"
     CDS             complement(8662..11733)
                     /locus_tag="VEV83_18610"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HYK47198.1"
                     /translation="MATGRENIERSIIEKEEKMVNGKSSHKKLSEPGKQAAKNIEQKL
                     HVKATSESKKRKPVKKDTLTVSKTADDKTVGKKKSPAKVEKKVAAPEPGKKLNEKVAR
                     KSPKSKEKKPVPPRTIRLIFQLKFHTNPGENLFIIGDHEAFGNNDVNNALPLQYLNEQ
                     MWVASADIDLTSVDAAGITYNYLLKHQDNFTVYDWGNDKTIDASLLKFEEVLITDAWN
                     HAGYFENAFYTEPFQNVLLKKNYTAVKLKEPKKFTHIFRVKTPLLAKGQTVCLLGASK
                     ETSEWNEAAPILLSSKPGDLFYSVSLDLSLVELPLVYKYGVYDTETKKFIRYEDGNNR
                     LLYHAHAAAQNKITIINDGFVHLPSPSWKGGGVSIPVFSLRSKDGWGVGKFGDLKLLV
                     DWAKQTGLQLIQILPVNDTSATDTWADSYPYAAISAFALHPMYLNINEVVAKANRYVL
                     DEVKKEKEELNKKDSVDYVAVNKLKWRIIEKIYPSQKEETFSSLEYKDFFTNNRHWLI
                     PYSAFCYFRKLYNTADFNSWPSHKQYVKEDANALFDDPKTFDAVAIHCFVQFHLHAQL
                     QDAAQYAHDNGIIIKGDIPIGIYRYGVDAWQQPGLYHMELQAGAPPDDFAVKGQNWGF
                     PTYNWKKMGDDHFAWWKQRFEQMSNYFDAFRIDHVLGFFRIWSIPMDAREGIMGHFEP
                     CIPVHINEFHERQIWFDHHRYCKPFINDRVLWDITGDQAEHFKHDFLQPDGYGNYNLR
                     PEFSTQRDVEEYFSLREANEYNNRTRQQLFDLISNVILFEAEGSRGLQFHFRFGMEST
                     KSFQYLDQHTQQQLRDLYVDYFFRRQDTFWMKEAMQKLPALKRVTNMLICGEDLGLVP
                     TCVPDVMNQLGLLSLEIQRMPKQTHREFFHPNDAPYLSVVTPSTHDMSTIRGWWEEDR
                     NKTQRFFNFELGQWGDAPFFCEDWVNKAVVVQHLYSTAMWSIFQWQDIMGINKKLRRE
                     NPHEERINVPSNPKNHWKYRMHIYLEDLLNEDEFNNELHGYLIACGRAPKE"
     gene            complement(11867..12697)
                     /gene="ispE"
                     /locus_tag="VEV83_18615"
     CDS             complement(11867..12697)
                     /gene="ispE"
                     /locus_tag="VEV83_18615"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HYK47199.1"
                     /translation="MIAFPNCKINLGLHIVAKRADGYHDLETVFYPLPFYDVLEIIQS
                     SAIEKDPKLTVSGLKLETGSAANLCVRAYQLLKKDFPDLPLVEIFLHKNIPIGAGLGG
                     GSADAALMLSLLNQKFSLGIGEDQLLNYALQLGSDCPFFVVNKPCFATGRGEQMETLD
                     LNLSPSTLVLVNPRIHIETKWAFAQIKSTFPRQNLRSIISHPVYEWKHSLQNDFEQPV
                     FSAHPEIAAIKNKLYETGALYAAMSGSGSSVFAIFNRPWLRKNQDVFPAAYFVKELSL
                     "
     gene            complement(12724..13305)
                     /locus_tag="VEV83_18620"
     CDS             complement(12724..13305)
                     /locus_tag="VEV83_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease domain-containing protein"
                     /protein_id="HYK47200.1"
                     /translation="MKKIELEIVALSHSITQTHSYAVVLGEVNGLRRLPIVIGGFEAQ
                     AIAVALERMQPSRPLTHDLMKNFMHAFNVELMEIIINDLQEGIFYSKLVCVNEHDTVE
                     IDSRTSDALALAVRFGCPIYTYENILENAGILMEDESKQKKSEIPVQESSAASKDLHK
                     MTMEELQKLLTEVLEQEDYIRAIEIRDEINKRK"
     gene            13454..14437
                     /locus_tag="VEV83_18625"
     CDS             13454..14437
                     /locus_tag="VEV83_18625"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47201.1"
                     /translation="MQIFITGATGYIGNVLARRLAEEGNIIHALCRNKNVTVLDHPNI
                     RIFAGDIMDQTSVRDAMNGCGQVYHLAAFARVWAKDPNTFYRFNVEGTKNVLDAARDL
                     GIQKIIFTSTCGTLGPSGKFPVREEDERMGKPFTDYELSKTQAEQLCREYCNKHGLPI
                     VIVNPPRVYGPGLITESNAVTRLIRLYMKGKWKIMPADGKRTGSYVYIDDVVNGHILA
                     MQKGRSGERYNLGGVNASYIEFFDTLARITGKKNVLYKLPVRVMLVAGQALLSYSKVT
                     GKRPLLTPPWIRKYYYDWSINSEKAQRELGYSFISLEDGLRKTVEWLRNIN"
     gene            14440..15234
                     /locus_tag="VEV83_18630"
     CDS             14440..15234
                     /locus_tag="VEV83_18630"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK47202.1"
                     /translation="MEVYTLITGASAGIGKALARECAARKMNVLLVALPDPELECERQ
                     EIIRTFGVQCHIFGTDLTDRNAMCKIYKWVKENDFRINILINNVGVGSRGDFEHTETQ
                     FYEKQLQLNIYAATMLTRHFIEELKANAPAHILNLGSMGGFYMIPGKTVYAASKAYIY
                     YFSRSLRLELKPHNVIVSVLCPGGTDSNENTISINKELKGVAKWSILMPDQVAKEAIA
                     KMLKGQARIIPGFINKLTYHLSRIVPEFIHRYFIYNAFKHVQKHKY"
     gene            15294..16820
                     /locus_tag="VEV83_18635"
     CDS             15294..16820
                     /locus_tag="VEV83_18635"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8/S53 family peptidase"
                     /protein_id="HYK47203.1"
                     /translation="MKKILLHLLPLAVIFAACQKNQNERIPADVQQPVQLQSTQEINA
                     YISAVIDSKGEFNWKDASDYMLYSAIMHSDDHMVSVGYKPADEENVEERLTRIDLRDN
                     KWTSAKMQVLELIIQEEKLLRPQLKLENVEVWKENKLPVIDVRIDNINTLTLLRQSKL
                     IRYVEPMGYEPERFDGQTQRTTATGPGCGSYSGDPNLVEGNDFKTVLPDAKQSWNYPS
                     HTIPKAWVQSTGRGIKVMVIDTGVSPDQDNMGNDFNQGRSSGRTLQKIFTLPNATSAD
                     DICGHGTTMSSTVAAPRCIDGNSVGVAYNCNLVVCKASNDVIIDESSEVKGVADAFTI
                     AADDTSVKITSLSLGRVTTSSQIKDAIIYAYDKGKLMFCAAGTSSIFTSWYGVIFPAT
                     MSQVQAVTGVKSRSTLSACNDCHKGAAVDFVTVMQQASDAGNPIANAMSGDVPTTVGG
                     SSVATATAAGIAALVWSYHPSETRDQIVQRLVTTASAYPNRTSNFGWGKMDAYAAINK
                     "
     gene            16880..17443
                     /locus_tag="VEV83_18640"
     CDS             16880..17443
                     /locus_tag="VEV83_18640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47204.1"
                     /translation="MTIVRLMMSASLVLFLTSCPGDVRSKLYRDDEGNFLEAACDKMP
                     ACDDKYAVIITETLDSLGLPNLNKKNDFVFCCDTVMTVADTIKLYAKKMSEYYQQWYG
                     KKLSLRESGALFFNDLRRLWIYNQSKDAIFLKAKFDSISPATYQADSIRLCVISNNGF
                     AICFKTQKTADAFADTLKTAAEACCHP"
     gene            complement(17500..>17955)
                     /locus_tag="VEV83_18645"
     CDS             complement(17500..>17955)
                     /locus_tag="VEV83_18645"
                     /inference="COORDINATES: protein motif:HMM:NF039954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5990 family protein"
                     /protein_id="HYK47205.1"
                     /translation="AKLFAMENELTLRIILQKPPNGVDFGLQKGTGSVYETVQKQRSG
                     GEDLKFEFSVRLKTSDNSAANFLGSFVQGPPSARFVYVDIGTCAGQKDTNWSRRLKIP
                     LAGISGETLNKLSADKTLILEAKVPGTGKDGGPSCATIKPFDGWKLVKK"
BASE COUNT         5030 a         3894 c         4047 g         4984 t
ORIGIN      
        1 ggcgagccag cgacagtagt cccaacgatc atattatttt ctaccgtgta ttcgccggcg
       61 cccacaagac gtttccatcc gttcaatgtt tttccgtcaa aaagatcctg gaagccttgt
      121 tcattttgcg accacaaaat ggcaccaatg catagaaaat acagtgaaaa aaaaagtttt
      181 ttcattggga gcattttata gatgaagtta gcttgaaatt tttacgaaac aatttttgcc
      241 acggagatta catctcgcca ggtttcgatc ggaatgattt ttttcctgat caatatgaat
      301 tttttcccgc tcagccgata acaatttttt gcggcgacat actgatacat ttttgtttca
      361 tcatttaaaa aacaaaaaaa cttttatgaa aaagatcgta tttgcagcct tgatgctgac
      421 ttccgtttcc ggctttgccg cgtttaatca acacgctgtt tcgagtactg tggcaatgaa
      481 ggacgacggc ggcagcaaac acatttcagc ttcgcaggtt cctgcggctg taattgaatc
      541 atttaacgcc aaatttcctg acgcaaagaa cgttcagtgg gaagtgcaaa aagaagatgg
      601 cggaaaaatt taccaggccg agtttacaca aaacggaaaa cgctttaaag cacagtttgc
      661 tccggatggt acttttcttg gcaaacaaag aacgtagtgt tttttatttc cagcgaaaag
      721 ccgtccgcat tgcggatggc tttttgtatt ttttggattc tgtataattc aattcggtta
      781 aaccttgcca tttttgatgt cgtttaccac acccgggtca agaagtgttg tgatatcacc
      841 caaattttca gtttctcctt cggcgatctt tcgcaatatg cgccgcatga tctttccgct
      901 gcgcgttttt ggtaacccgc ttacgaattg aattttatcg ggctttgcaa tgggtccaat
      961 gatcctgctc acggttgccg caatatcctt gcgtgtgagc tcatcgtctc cgtgggtgtt
     1021 actgcatatt acgtaagcat aaatgccctg gccttttatc tcgtgatgat aacccaccac
     1081 agcgctttcc acaacgccgg agtgcatgtt gatcgcgttc tcaacttctg ccgtcccgat
     1141 ccggtgtccg cttacgttca gcacatcgtc aacacgaccg gtgatgcggt agttcccttc
     1201 atcatccttt aaggcaccat cgcctgtgaa atacaaaccg ggaaactggt caaaataatt
     1261 ctttctgcat ctttcatgat cgccatacgt ggttcgtatg atcgacggcc acggcgcttt
     1321 gatgcataag tttcctttga gaaatccatg ttcgtctttc tctgtcactt catgcccgtt
     1381 ctcatcaacc aaaacaggct gcacaccggg caaaggcagc gtgcaccagg acgctttcga
     1441 aggcgttact cctgcaagat tcgagatcat gataccaccc gtttccgttt gccaccatgt
     1501 atcaacaacc gggcagtgtt ccccgccgat atgctgatcg taccaatgcc acgcttcttc
     1561 attgatcggt tcaccaacag taccaagcac acgtaacgag gaaagatctt ttcccttcaa
     1621 tggctcatcg ccaaaaccca tcaaactcct tatggctgtc ggcgcggtgt acacaatatt
     1681 tactttgtat ttgtcaatga tattccaaaa tcttcccgca tcaggccatg taggaatccc
     1741 ttcaaacatt aagctggttg cacctgcgga aagcgggccg taaacaatgt aactatgacc
     1801 tgtgatccat ccaatgtcgg ccgtgcagaa gtgcaactca cggggcttat attgaaaaac
     1861 gtttacgaac gagtagttag taaacaccat atatccggcg caggtatgca ctacaccttt
     1921 tggtttcccg gtggatccgg aagtatacaa aatgaacaaa ggatcttctg catccatttc
     1981 ttcagcagga caatctttca ttccaagggt tactacttta ttgatctcat cttcccacca
     2041 aacgtcgcgc ccttttatca tcgagatcgg cgtatgcgtt ctcgtataaa cgataacttt
     2101 ctttacaaaa ggacaagcga caagggcatc gtcgatcaca gatttgagcg gaatatcttt
     2161 tgcgccacga taagcgccgt cgcatgtaat aataaattgc gcgtttgcat cctgcaaacg
     2221 gtctgagata ctttgcgcac taaacccgcc gaatattacg gaatggatcg caccgatcct
     2281 tgcgcaggca agaactgcga tggcaagctc cgggatcatc cccatataaa tacaaacgcg
     2341 gtcgcctttc tgcacaccat ttactttgag aacgtttgca aactggcaca ccttttcaag
     2401 aaggtcctta taggtaagca cgcggtgatg ttcttctgga tcattcggtt cccagatgat
     2461 cgccggttga tcgggatttg attgtgcatg tcgatcgagg caattctcgg ttatattaag
     2521 tttgccgccg gtgaaccatt caatctttgg ttccataaaa ttccagttca ggacgttatc
     2581 ccatttcttt ttccaaagaa aatgctgagc aacatcgccc caaaattcct ccggctgttc
     2641 aacgctttgc ttatattgtt tttgatactc ttctaacgat cgtatttgat atggatatgg
     2701 catggctgca gattgtggcg taaatttatt aaacatctat tcaaagtgta atgacgaaaa
     2761 caattttatt aactatccat aaaattgcgc atatcggtca acacctatct ttgtttgaaa
     2821 gcacacaatt ccacgcgacc gcatgtctat ccaggtaaga aatctgttga aaaaatttgg
     2881 cgagcagaag gctgtaaatg atgtaacgtt ttcgcttgac aaaggcgaca tcgttggatt
     2941 cttagggcca aacggtgcag gcaagagtac taccatgaaa atgataaccg gctatcttga
     3001 agcggatgca ggcgaaataa aggtttgtgg tatgcccgtt aaaacaaatg cggtggatgt
     3061 gaaacgaaag atgggctacc tacccgagtc gaaccctttg tattatgata tgtatgtgcg
     3121 cgagtacctg aaatttgtgg cgggaatata taagattgaa acaccaaaaa ttaagattcg
     3181 ggaaataatt gagctgaccg gtttaacggt tgaaagcaga aagaaaattg gccagctttc
     3241 aaaaggttat aagcagcgtg tgggtttggc tgctgcattg ttacatgagc cggaagtttt
     3301 gatcctcgac gaaccgacaa gcggccttga tccgaaccag atcgtcgaga tcaggaatgt
     3361 gatcagggag cagggtagaa ataaaacagt tttgttttcc acgcacatcc tgcaggaagt
     3421 gcaggcaatt tgtgaccgcg tgatcattat caataaaggc gagcttgttg cagacagccc
     3481 ggtgcaggaa ttgcaactga ataggagatc gaacggtgtg ggtgtcacat tttcaaccag
     3541 gatcagtcag caaaaattac aggatctgcc tgcagcgatc tctgttgcca aaacaaatga
     3601 tcacagtttt agattaacga ctaacgacac taatgaattg cggcggcaac tgcttgaatt
     3661 tgccgttgct gagcaactgg atattgtttc gttgcaaacc gagggcaaca ccctggaaga
     3721 tattttccgc agtttaacca ccaccgaaat aagcaattaa cttataaacg aattacctct
     3781 gatgttacag ccgtccacat taaaattttt aaaagatctt aaaaagaata acaataaaga
     3841 atggttcgat gccaaccgca aaagatatga agctgcaaaa gctgattttg cggcgtttgt
     3901 gcagggagta attgacaggt tttgcaagac agacgcgacg ctttcagctt tatctgcaaa
     3961 agattgttta ttcaggataa accgcgacat acgatttagt aaagacaagt ccccgtacaa
     4021 gacgaatttc ggcgccagca tcaatgccgg tggcaagaag agagtgaggg caggttatta
     4081 tctgcacctt gagccaggac aaagctttgt tggaggtgga atatacatgc cgacccctga
     4141 agaactgaaa aaagtgcggc aggagatcga ttataatttt gaagaattca gaaaactgat
     4201 caccaacaaa aaattcaaaa caatatacaa ggacatcagc aaagacggcg agttgagctt
     4261 aagccgtccg ccgaaaggtt atgacgaaaa taatccggcg atcgagtaca ttaagctgaa
     4321 aagcgtaatt gcaatgaccc ctttaaacga tgcggacctc accgataaaa agctgtctgc
     4381 aaaagttgtg agcgcgtttg aagcgttata tccggtgatc gtcttcatca ataaagcgct
     4441 ggagaattga acaacaaagt tgccgtcacc gcactgctga agggctgccc gattgaagtg
     4501 taaagcccgc agctgaagcc ttgcgaaggg gtgtgtggcg aggacttgaa acgaaaagcg
     4561 ggggacggga gttgagaaaa gagatgaacg atgacagccc caaataatag ttaccattga
     4621 acttgaattc ccaaaccagg gttatcagaa attttaagag caccattgtc atactgcaaa
     4681 cccgtggcaa tatcttcttt taataacaat ggtccatcca tatcaacata atcaagttgc
     4741 ggtaaaaaat gagcaattgc tgcagagccg acggtgcatt cgttcatgct gcccatcatt
     4801 actttcaaat taagttccct tgcttttttt atcattcgca acgccggtgt gatgccgctg
     4861 cattttgtta gcttgatatt gatgccatga aaacaactcg cgcatttttc cacgtcagtt
     4921 tcgaagacgc agctctcatc tgcaaaaagt gcgagagcag atcgttcata cagtatcttc
     4981 atttcctccc aattgtcttt tgcaagtggc tgttcgatca attctacgcc taatgttttt
     5041 aagatcggga ttttttcaag cgcttcgttt aaaccccagc ccgcgttcgc gtcgacacga
     5101 aagactgcat cagtatgttt acgcaatgat tcgacaatgc tgatgtcgtc agcagttccc
     5161 aattttattt tgtaaacggg ccagggtttt tgttgcattt tcccgatcat tttttcgatc
     5221 gtatcaatgc caatcgtgta atcggtaaca ggtgtgttga taaattgtgt gttccatatt
     5281 ttatataacg gttgattctg catcttgcca aacagatccc aggcggcgat atcaagggcg
     5341 caaactaaaa atggattttg cggaatgaga tggtgcaggt aatgccagta acgctcgggc
     5401 tgagtgaaag caaatttctc gatcattgtt ttctttgact gaagatcggc gatcatttgc
     5461 tcgacggtga tattatagta actaattgcg ggcgcctcgc cgtagccaac caggtttcca
     5521 agccgcagtg caacgatcaa cgaaggctgg tgcgttttag tccgaccacc agagatggtg
     5581 aaaggatact caaacggcag ttcgattttt ttatagtgaa cgttcacaag taaaaatttg
     5641 aatgcgttgc agatacttcc tgttccgagt tgacacggca gccacttttt attcagcact
     5701 catagtaagc atcactgtca tgccggggca tctgtgcaac gcaaagaaac aagtttgaca
     5761 gcaacattaa ttccatactt taggatcgta atcttgtcgc atgagaaaat catttccaaa
     5821 aaaatttttg ctcgccactt tgatctttgt cgccggaaaa tgttttccgc agtcgcaagc
     5881 tacggatctg gagaaaacta cggacagtct tgcgcaaatc gtgatccggc tccttaacga
     5941 gaagaatgcc gacagcattt attcgatgat gagtgaacat tttaaggctt caatgtcgta
     6001 cccgaatttt aaaggtgtgg tttcggaggt cttttccatc tccccttttt ataatgttac
     6061 ttataaaacg aaccagggtg gcattaacaa atacaggatg gaaagcaaag aaggatcatt
     6121 ccaaattttg gtggggctcg atagcaatcg aaaagttgaa acacttgaga tcaacggtta
     6181 tgaagatgaa tcgctcgcgc cggacaagta caagaaacaa gatgtgatga taacaatgcg
     6241 tgatggggta agattacata ctgtgatctt cactccaatt actgaaaagg gggcgttgcc
     6301 tttcattctt caacgcacgc cgtatggcgt cgatgattat ttaagcccgg aaaaagaagg
     6361 ttatgtaaag gacatggcgg aagacggata tattttcgtg taccaggaca ttcgcggcag
     6421 atataaaagc gaaggacaat ttgaaatgca gcggttcacc cgtgataaga aagatccaaa
     6481 agcgatcgac gaaagcacgg acacctacga tacattcgac tggctgttga agaatattcc
     6541 aaacaacaat ggaaaggctg gcatgcttgg catctcttat gatggatgga caaccgtgat
     6601 gggtgcggtt gatccacacc cggcgctggt cgccatatct gaacaggcga gtcctgcgga
     6661 tatgtttttg ggagacgact ttcaccacaa cggcgcattt cgtttaagtt atggtttcga
     6721 gtattctttt atggaagaag cgacaaacac ggattcttta tacccgttcg atatgtatga
     6781 tacgtacaat tggtatttaa aacttgggcc gctttctaac gtcaataaaa aatatttttt
     6841 caataaactt ccgtcatgga acaattttgc tgcgcatccc aactacgatg acttttggaa
     6901 gaagcaggca cttgcaacaa gattagattc gccacgcgta tacacgatga atgtagcagg
     6961 ctggtgggac caggaagatt tttatggccc gcaaaaagct tatgagactt gggagaaaaa
     7021 cgatcgttca cacaaaaatt ttatcgttat aggtccgtgg aatcatggag gttggggatc
     7081 tggcgccggc aacaggttag gcaacattga ttttaattct gcaaccgctg aaacattccg
     7141 aaagaacatc caggctgcat ggtttgcata ttatttaaaa ggagagggta gcggaaattt
     7201 tgctgaggcg acgacgttcc aaaccggctc caatacctgg aagacgtatg atcgctggcc
     7261 gccgaaagaa gccgtgaaga agaacttata ttttcacgag agtggaaagt tatcgtttga
     7321 gaagcccgta acaggcgaaa aaaattttac gtcttacgtt tctgatccag ccaaccctgt
     7381 cccttatcga acgcgtccca tcgaagaaac gtatggcgcc ggttcacgat ggtacacatg
     7441 gttaaccgaa gatcaacgct tcgtagacaa aaggccggat gttgccactt tcgaaacaga
     7501 tgtgttaacg gatgacgtaa cggtaacagg aaacatcttt gcaaaattgt ttgcgtcaac
     7561 aaccggaagc gatgcggact ggatcgtgaa actgatcgat gtttacccgg acatgtacga
     7621 cgaagatccg cagatgtccg gatatcagtt tatgatagcc aacgatgtat ttcgcggtcg
     7681 attcagaaac agttttgaaa agccggagcc catcacgcca aacaaagtgg aaagctatac
     7741 gatcgacctg catagtgtga atcatgtatt taagaaaggc caccgcatca tggtgcaggt
     7801 gcagagtaca tggttcccca ttattgatcg caacccacaa aagtatgtgc ccaatatttt
     7861 tgcggcgacc gaaagcgatt tccagtcagc aacccaaaag atatatgggt cagttgagtt
     7921 ttcgtcgcat atagagttat cggtgataga gtagtttgaa gtttgaagtt tgaggtttga
     7981 agttggctgg acatggttca gattattcaa ataacctgag ccttctcttt ataaaagcat
     8041 tacttctttt ggcatgtgaa actccgatga cgaaaatagt tgcatctgta actatgtaat
     8101 aaactttata tggaaacttt tctatgaggt gtcttctcac aggctttctt ataacggagt
     8161 aactaaaagg cgaagagtga atgtcttcca ggcaacgaag aaaactaaaa taaaagcgtc
     8221 tccctaagcc gtgcaatttt ttttcatagt aatcaatagc ttcatccgca tcaataagaa
     8281 cgataggttt aatgacaagc ctaaaaacca tactttcctt caaaatagct tttcaactct
     8341 gccaaactca ttccttcctg tggattcatt tcgtgtagtc tcaagcgttc ttcagcgaaa
     8401 gcaatttcct cgtcagtaac cggcaataac ttttcttcga cactgctcca aagttcttca
     8461 gcaagcgcta tcttttcttc ggcggaaaga gaaagcaatt catttctatc gatgggcata
     8521 aatctttttg acaaaggtat gaagtattcg cgacagactt gccctgtact cctttgcagg
     8581 tctgccgcat agccaatctc ataaaagtaa gaaagcaact tccgttcact ttctcattcc
     8641 ttattttttc tttcttattt cttattcttt cggggctctg ccgcaggcga tgaggtagcc
     8701 gtgcaattcg ttattgaact cgtcctcatt tagcaggtct tccaggtaaa tatgcatacg
     8761 atacttccaa tggttctttg gattcgaagg aacattgata cgttcttcat gaggattttc
     8821 gcgccgcagc tttttattga tgcccataat gtcctgccat tgaaaaatgc tccacatcgc
     8881 ggttgaataa agatgctgaa caacgacggc tttgtttacc cagtcttcgc aaaagaacgg
     8941 cgcatcgccc cactgtccga gttcaaaatt gaaaaatctc tgcgttttat ttctgtcttc
     9001 ttcccaccat ccgcggatcg tgctcatatc gtgcgtcgat ggtgtaacga cacttaaata
     9061 cggcgcatca ttgggatgga aaaactcacg gtgcgtttgc ttcggcatgc gttgtatttc
     9121 cagactcaat aaacccagtt gattcatcac atcaggaacg caggtgggca caagaccaag
     9181 atcttctcca cagataagca tgttggtaac gcgcttcaat gcaggcaatt tctgcattgc
     9241 ctctttcatc caaaatgtat cctggcggcg aaagaagtaa tctacataaa gatcgcgcag
     9301 ctgttgttga gtgtgctggt caaggtattg aaatgatttg gttgattcca ttccaaagcg
     9361 gaaatggaac tgcaagccgc gcgaaccctc tgcttcaaac aatatcacat ttgagatgag
     9421 gtcgaacaat tgttgccggg tgcggttgtt atattcgttt gcttcgcgta gactgaaata
     9481 ttcttctaca tcgcgctgag tggaaaactc tggcctaagg ttgtagttgc cataaccgtc
     9541 gggctggaga aaatcgtgtt tgaagtgttc tgcctggtcg ccggttatgt cccacaacac
     9601 ccggtcgtta atgaatggct tacaatagcg atgatgatcg aaccagatct gtctttcatg
     9661 aaactcattt atgtgcacag gaatgcatgg ctcaaaatgg cccatgatgc cttctcttgc
     9721 atccatcggg atactccata tgcggaaaaa cccgagaacg tgatctatcc ggaacgcatc
     9781 aaagtaattg ctcatttgct cgaaccgctg tttccaccac gcaaaatgat catcgcccat
     9841 cttcttccag ttataagttg gaaaacccca gttctgccct ttcactgcga agtcatcagg
     9901 tggcgcgcca gcctgcaatt ccatatgata taaaccgggt tgctgccagg catcgacgcc
     9961 gtaacggtat ataccaatag gaatgtctcc cttaatgatg atcccgttgt catgtgcata
    10021 ttgtgctgca tcctgcaatt gcgcatgcaa atgaaattgc acgaaacaat ggatggctac
    10081 cgcatcaaaa gttttcggat catcaaataa agcattcgca tcttctttta cgtactgttt
    10141 gtgcgaaggc cacgaattaa aatcagcggt attgtataat ttcctgaagt aacaaaaagc
    10201 ggaataaggt atgagccaat gcctgttgtt ggtgaaaaaa tccttgtatt ctagtgatga
    10261 aaatgtttcc tccttttgtg aaggataaat tttttcgatt atccgccatt tcaatttatt
    10321 cacagctacg taatcaactg aatccttttt attgagctct tccttttctt ttttcacttc
    10381 atccaacaca tacctgtttg ctttggcgac gacctcgttt atattcaagt acatggggtg
    10441 aagtgcaaaa gccgagatgg cggcatacgg atacgagtcg gcccatgtgt ccgtagcgct
    10501 cgtatcgttc accgggagaa tttgtatgag ttggagaccg gtttgttttg cccagtcgac
    10561 gagcaatttc aagtcgccga atttaccaac tccccacccg tctttgcttc gcaagctaaa
    10621 gaccgggatc gacacgccgc cgcctttcca ggagggcgaa ggcaggtgca caaagccgtc
    10681 attgatgatc gtgatcttat tctgtgcggc ggcgtgcgca tgatataaaa ggcggttatt
    10741 cccatcctcg taacgaataa attttttggt ttcggtatcg tatacgccat atttataaac
    10801 caatggcagc tcaacaagag aaagatcgag cgacacgcta taaaataggt cacctggttt
    10861 gctgcttaat aaaatcggcg ccgcctcatt ccattctgaa gtttctttcg aagcacccaa
    10921 caggcacacg gtttgtcctt ttgcgagcaa cggagttttt acacgaaaga tgtgggtgaa
    10981 tttttttggc tcctttagct ttacagccgt gtaattcttt ttgagaagta cattttgaaa
    11041 tggttcggtg taaaacgcat tttcaaaata acctgcatgg ttccaggcat cggtgatcag
    11101 cacttcttca aactttagta atgatgcgtc gatcgttttg tcgtttcccc agtcgtagac
    11161 ggtaaaatta tcctggtgct tgaggagata attatatgtg atccctgcgg catcaaccga
    11221 cgtaagatct atgtcggcag aagccaccca catttgctca tttaaatatt gaagaggcaa
    11281 tgcgttgttc acgtcattgt tgccaaaggc ctcgtggtcg ccgataataa aaagattttc
    11341 tccggggttc gtgtgaaatt ttaattggaa aatgagccgg atcgtccttg gaggaactgg
    11401 ttttttttct tttgacttcg ggcttttcct tgcgaccttt tcgttcagct tttttccggg
    11461 ttccggcgct gcaacttttt tctcgacttt cgcgggcgac ttttttttcc cgacggtttt
    11521 atcgtccgct gtcttagaaa cggtaagggt gtctttttta accggctttc tttttttcga
    11581 ttcggaggtt gccttgacgt gcaacttttg ctcgatgttt ttcgccgcct gcttgcctgg
    11641 ctcggaaagt tttttgtgag aacttttgcc gttaaccatt ttctcttcct tttcgatgat
    11701 cgatcgttca atattctcgc gtccggttgc caatggataa tgttttagaa attgcgatta
    11761 aaaaatctca atgattggca gttgatcaac ggcaatcaat agaggctggc gaaaatatat
    11821 aatgtgtaat tactacacaa atctaataaa taacatttga aaatttttat agcgagagct
    11881 cttttacaaa ataagctgca ggaaaaacgt cctggttttt cctcagccac gggcggttaa
    11941 aaattgcaaa cacagaactt ccactgccac tcatcgcggc gtaaagagcg cccgtttcat
    12001 atagtttatt tttaatggcc gcaatttcag ggtgggctga aaaaaccggc tgctcaaaat
    12061 cgttttgcag tgaatgtttc cattcataaa cggggtggga aatgatgctt ctcaaattct
    12121 gtcgtggaaa tgttgactta atttgagcaa aggcccattt tgtttcaatg tggatacgag
    12181 gatttacgag taccaaagtg gagggggaca agtttagatc caaagtttcc atctgttctc
    12241 cgcggccggt tgcaaagcaa ggtttattca ccacgaaaaa agggcagtca cttcccaact
    12301 gaagcgcata gttcaatagc tggtcttcgc cgatgccaag cgagaacttt tgattcagca
    12361 gcgacagcat gagtgctgca tcagcgcttc cgccgccaag gcctgcgcca ataggaatat
    12421 ttttatgcag gaaaatttca accagcggca ggtccggaaa atcttttttc agcaattgat
    12481 aggcccttac acaaagattg gccgctgagc cggtttctaa tttcagtcct gagaccgtga
    12541 gtttcggatc tttttcgata gctgaacttt gaattatttc cagcacatcg taaaaaggca
    12601 gcgggtaaaa aacggtttca agatcatgat aaccgtcggc tctctttgcg acaatatgta
    12661 aacccagatt gatcttgcag tttgggaacg ctatcaaaat aaattattaa agatgtcgac
    12721 gggctatttg cgtttgttga tctcgtctct tatttcaata gcacgaatgt agtcttcctg
    12781 ttccagcact tctgtgagaa gcttttgcag ttcttccatc gtcattttgt gaaggtcttt
    12841 actggctgcg gatgattcct gcacggggat ctctgatttc ttttgtttgc tttcgtcctc
    12901 cattaaaatg ccagcatttt ctaaaatatt ttcataggtg tagatcgggc aaccaaacct
    12961 taccgcaagc gcaagcgcat cgctcgtgcg gctatcgatc tccaccgtat catgctcatt
    13021 tacacaaaca agcttagagt aaaatatacc ttcctgcaaa tcgtttataa ttatttccat
    13081 cagctctacg ttgaaggcat gcataaaatt tttcatcagg tcgtgcgtaa gcggtcgact
    13141 gggctgcata cgttccaaag ccacggcaat tgcctgcgct tcaaaaccgc ctatcacgat
    13201 tggcagtctt cttaaaccgt tcacttcacc taaaactact gcataagaat gggtttgcgt
    13261 aatgctgtgc gataaggcca ctatttcgag ttctattttc ttcatgtaaa taaatccggc
    13321 ttaaaaaaac aaaaataaag atttcaaagt tacttactta accttgcagg tcttgagaga
    13381 aattcgggga aaattttttc ggacgattct gttattttga agaaagcttc attaactgaa
    13441 ttgaaaaatt aatatgcaga tatttataac gggcgccacg ggatacatcg gaaacgtgct
    13501 tgccaggagg ctggctgaag aaggaaatat aattcatgct ctatgccgca ataagaatgt
    13561 gacagttctt gatcatccca acatcaggat cttcgcgggc gacataatgg atcaaacatc
    13621 ggtgcgcgat gcaatgaacg gatgcggcca ggtatatcac ctggcggcgt ttgcacgtgt
    13681 gtgggcaaaa gatccaaata cattttatcg tttcaatgtt gagggtacta aaaatgtatt
    13741 ggatgctgcg cgagatctgg gtatccaaaa aattattttc acttccacct gcggtaccct
    13801 cggtccttcc ggcaagtttc cggtgcgcga agaagatgaa cgcatgggaa agcctttcac
    13861 agattatgaa ctcagcaaga cgcaggccga acaactgtgc cgtgaatatt gtaacaaaca
    13921 cggtttgccc atcgttatcg taaatcctcc gcgtgtatac gggcctggtc tgatcacaga
    13981 aagcaatgct gtaacccggt tgatcagatt gtacatgaag ggtaaatgga agatcatgcc
    14041 agccgatgga aagcgaaccg gcagttatgt ttatatcgat gacgtggtaa atgggcatat
    14101 cctcgcgatg caaaaaggaa ggagcgggga gcgttataat ttgggtggcg taaatgcatc
    14161 ttacatagaa ttctttgata cattagcgcg gatcacgggt aagaaaaatg tgttgtataa
    14221 attgccggtc agggttatgc tggtggcagg ccaggcgctg ctttcgtatt caaaggtcac
    14281 tggcaaacgc cctttattga cgccgccatg gatacgaaag tattattatg actggtcgat
    14341 aaattctgaa aaggcacagc gcgaattagg ttatagtttt atttctttgg aagacggttt
    14401 aagaaaaact gttgaatggc ttagaaacat aaattagcta tggaagtata cacgttgata
    14461 accggcgcca gcgccggcat tggtaaagct ttggcaagag aatgcgcggc aagaaaaatg
    14521 aacgtgctcc tcgtggcact acctgatccc gagttggaat gtgaacggca ggagattata
    14581 cgaacgtttg gcgtacaatg tcacattttt ggcaccgatc taacggatag aaatgctatg
    14641 tgcaagatct ataagtgggt taaagaaaat gatttcagga taaatatttt gatcaacaat
    14701 gtaggcgtcg gctcaagggg tgactttgaa catacggaaa cacaatttta tgaaaagcag
    14761 ctacaattaa atatttatgc cgctacgatg ctcacccgtc actttattga agaattgaaa
    14821 gcaaatgcac cggcgcatat tttgaacctc ggcagcatgg gtggctttta tatgatcccg
    14881 ggaaagacgg tgtatgcggc atccaaagct tatatctatt atttcagccg atcactccgg
    14941 ctggaactga aaccgcataa cgttattgtg agcgtgcttt gcccgggcgg cacagatagc
    15001 aacgaaaaca ccatctctat caataaggaa ctgaaaggcg ttgcgaagtg gtcgatattg
    15061 atgcccgacc aggtggcgaa agaagcgatc gcaaaaatgc tgaagggaca ggcgcgcatc
    15121 atccccggct tcattaataa actaacctat cacctgagcc gcattgttcc ggagtttatc
    15181 catcgctatt ttatttacaa tgcattcaag cacgtgcaga agcacaaata ttgatgcggc
    15241 tgatctgttg ttctgaaata aaggcgtaat tttctttcca acaattaact tttatgaaaa
    15301 aaatactgct tcacctgctt ccgctcgcgg taattttcgc ggcctgtcaa aaaaatcaaa
    15361 atgagagaat tccggctgat gtgcagcaac ctgtgcagct tcagtcaaca caggagatca
    15421 atgcttatat cagcgcagtg atcgatagca aaggtgaatt caattggaaa gatgcttctg
    15481 attatatgtt gtacagcgcg atcatgcata gtgacgatca catggtttca gttggctaca
    15541 agcccgccga cgaagagaat gtggaagaga ggctcacccg gatcgatctg cgcgacaaca
    15601 aatggacgag tgcaaaaatg caggtgctgg aactaatcat ccaggaggaa aaattgctac
    15661 ggccacagct caaactggaa aatgttgaag tgtggaaaga aaataaactg ccggtgatcg
    15721 acgttcgcat cgacaatata aatacgttga cattattaag gcaaagcaaa ttgatccgct
    15781 atgttgaacc gatgggttat gagcctgaaa gattcgatgg tcaaacacaa cggacaacgg
    15841 cgacgggtcc gggttgtggc agttacagcg gcgatccgaa tttagtcgaa ggcaacgatt
    15901 tcaaaactgt gttgccggat gcgaaacaat cctggaacta tccttcacac accattccaa
    15961 aggcatgggt gcaatcaacc ggtcgtggca taaaagtgat ggtgatcgac acgggcgtga
    16021 gccctgacca ggacaacatg ggaaatgatt tcaaccaggg gcgttcatca ggacgaacct
    16081 tgcagaagat ctttacgctt ccgaacgcga ccagtgctga cgatatctgc gggcatggaa
    16141 ctaccatgag cagcaccgta gcagcgccca ggtgcatcga cggaaattca gtcggcgttg
    16201 cgtacaactg caaccttgtt gtttgcaaag catcgaatga tgttattatc gatgagagta
    16261 gcgaagtaaa aggcgttgcc gatgcattta cgatcgcggc ggacgatact tccgtaaaaa
    16321 ttacgagcct gagcctcggt cgcgtaacaa catcttctca aattaaagac gcgatcatct
    16381 acgcttatga taaagggaag cttatgtttt gtgcagcagg tacatcctca attttcacga
    16441 gctggtacgg tgtaattttc ccggcaacaa tgtcccaggt acaggctgtt accggcgtca
    16501 agagtcgttc cacattatct gcctgcaacg attgccacaa aggtgctgca gtagactttg
    16561 ttaccgtgat gcaacaagcc agcgatgccg gaaacccaat cgcaaatgcc atgagtggcg
    16621 acgttccaac tacggtaggc ggttcatcag tggcaacagc aacagcagcg ggaattgcag
    16681 cgttggtttg gagctatcat ccttcagaga cacgagacca gatcgtgcaa agactcgtta
    16741 ctacggctag cgcttatcca aatcgaacta gcaatttcgg ttgggggaag atggatgcgt
    16801 acgcggcgat aaataagtga ggaagttcag agttaacagt tgacagttct ttgcaggaac
    16861 tcattcaaac aatgttgtta tgactattgt aagattgatg atgtcagcaa gcctggtttt
    16921 attcctaaca tcttgtcctg gagacgttag atcaaaattg tatcgggatg atgaaggaaa
    16981 tttccttgaa gccgcgtgcg acaagatgcc ggcatgcgat gataagtatg cggtgatcat
    17041 aactgaaacg ctggactctt tagggctgcc aaatttgaat aaaaagaatg atttcgtttt
    17101 ttgttgtgac accgtgatga ctgtcgccga tacaataaaa ctgtatgcaa aaaaaatgag
    17161 cgaatattat cagcagtggt atggaaaaaa attgagctta cgtgaatccg gtgctctctt
    17221 ctttaacgat ttgcgtcgtc tttggattta caatcagtca aaagatgcga tatttctgaa
    17281 agcaaaattt gattctattt ccccggcaac atatcaggca gattcaatcc gcttatgcgt
    17341 tatctccaac aacggtttcg ccatttgctt taaaacgcaa aagacagcgg acgccttcgc
    17401 tgacacgcta aaaactgccg cagaagcatg ctgtcaccct taaagaatta ttgaatgcgc
    17461 tggaactttt tattgttttc ttttgattga atcataaaat catttcttaa cgagtttcca
    17521 tccgtcaaaa ggtttgattg tcgcgcagga agggccgccg tctttcccgg tgcccggaac
    17581 ctttgcttca aggatcaatg ttttatctgc ggataatttg ttcaaagttt cgcccgatat
    17641 acctgctaac ggaatcttca aacggcggct ccagttagta tctttttggc ctgcacacgt
    17701 gccgatatcg acataaacaa atcgagccga tggaggtcct tgtacgaatg aacctaaaaa
    17761 atttgctgcc gaattatcac tggttttcaa gcgaacgctg aactcaaact ttaaatcttc
    17821 tccgccggat ctttgttttt gaacagtctc gtaaacactt cctgttcctt tttgcaaacc
    17881 gaagtcgacg ccatttggcg gtttttgtaa tattatgcgg agagttaatt cgttttccat
    17941 tgcaaataat tttgc
//
LOCUS       DASQJI010000684         2971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2552728,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000684 DASQJI010000000
VERSION     DASQJI010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2552728"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(548..>2971)
                     /locus_tag="VEV83_18650"
     CDS             complement(548..>2971)
                     /locus_tag="VEV83_18650"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47206.1"
                     /translation="RQKLFSLLNIFGLALALASAMFIFLYVSDELRYDTIQPHYKDTY
                     RIGTTYITGDGQHFDNTVAPGYFLRYLKDNRKDDILYTTRTSWIGYPTALNYKPADKI
                     VLTEEIRWAEPGFDKVIYFDLLKGNKEKMFANDNTIALSETGARRIFGNTDPMGKIIS
                     LKHFFATQNRDIDLMVTGVYKDYPSNSHFKPEYIVNLNAMRTIQGEHFNDYMEGSRFD
                     QYVNFFEDYVVLKPNTNLQSINTTLNSLANQMIQTDSFSRVSGAKFLAFTTKLSDLHF
                     DPKVEWENNTRGNKSYLNIFSIIAVMIMLIACINYTNLATARSVKRSKEVGLRKSFGS
                     NRKQIALQFFLESFIMTLCALILSFILVLAFLHPFNQLANKSFSIASIFQPHMMAIVS
                     GVVLFMTVASGLYPAVYLSRFKPVQVLKGQLVKGKRAEFFRKSLVTVQYTVALGLVIY
                     TFIVIRQMEELKNTKLNEQGSQLLAVRFGGTATQDKFEVFRQSVLQDPEIQHVTLADH
                     LPRLDYFGTNGTQVKFPELGNKDLRSNIFHVDYDFAKTFDIEFIAGRDFQYGNVNDST
                     SVILNQATVKALGKPLDKIIGATMIDSRDNMPYKVIGVVKDFPYQSMHHAIDPLIITP
                     HNNFFYEICYVKLPPGKFQEKIAAIEKKWKAVYPGTGFSHWFVNDEFNRMYIAEDRVL
                     ALAKVFAALSIIITIMGVFSLASYTAEQRTKEVGIRKVLGAGDKHVAALFAWMFVKIF
                     LIASVLAIPLSWFFGNKWLQGFVYRTPINPLIFILSLLGLFLITFLTVGYEIWRSVRA
                     KPVIALRSE"
BASE COUNT          844 a          661 c          616 g          850 t
ORIGIN      
        1 acagatagaa cgcacaacat actctgttag ctctgcaccc tctgtgcgaa attcaacgaa
       61 cattaaaact aagaagaggt aatactctgc tttttcccat tatctattca ttccggagct
      121 cgctcacggg cttggataaa cagagaggaa gatcgacttt gatatctgtg ttaagctgtg
      181 gcatcggtga gaaacttttg ttttctctca cagatttact cagatacaca cagatagaac
      241 gcagaacata ctctcttagc tctgtgccct ctgtgcgaaa ttcgactaac attaaaacta
      301 agaagaggta atactgtcat tgttccatta tctattcact ccccagctct atcaccggct
      361 ggctaaacag ggggaggaag atcgactttg gtatctgtgt taatctgtgg catcgatgag
      421 caattttttt tctctcacag atttagtcag atagacacgg atagaacgca gaacaaactc
      481 tcttacctct gcgccctctg tgcgaaattc aactaacatt aaaactgaga agaggtaata
      541 ctctcatcta ttcactacgc agcgctatca ccggtttcgc tcgtaccgat cgccatattt
      601 cgtaacccac agttaggaaa gtgatcagga atagtcccaa caggcttaaa ataaaaatga
      661 gcggatttat cggagtgcgg tatacaaaac cctgcaacca tttattccca aaaaaccatg
      721 atagcggtat tgcaaggacg ctcgcaatga gaaatatctt tacaaacatc cacgcaaaca
      781 gggccgctac atgtttatcg ccagcgccca gcacctttct tatgcccact tcttttgtac
      841 gttgctcggc agtataggaa gccaggctaa aaacacccat aatggtaata atgatcgaaa
      901 gtgcggcgaa cacttttgca agcgccaata cacgatcctc agcgatatac atccggttga
      961 attcgtcatt tacaaaccaa tggctaaaac ctgtgcccgg ataaaccgcc ttccatttct
     1021 tttcgatcgc tgcgatcttt tcctggaatt ttccaggtgg tagtttcaca tagcatattt
     1081 cataaaagaa attgttgtgc ggagtaatga tcagcggatc aatggcgtgg tgcatcgact
     1141 ggtaaggaaa atcttttacc accccgatca ctttgtaagg catgttatcg cggctatcga
     1201 tcatagtagc accgatgatc ttatccaaag gtttacccag tgctttcacg gtagcctggt
     1261 ttaagatcac cgacgtgctg tcgtttacgt ttccgtattg aaagtccctg ccggcaataa
     1321 actcgatgtc aaaggttttg gcaaaatcat aatcaacatg aaagatgttc gatcgcagat
     1381 ctttgttacc cagttcaggg aactttactt gtgtgccatt cgttccgaag taatccaaac
     1441 gtggcaaatg atctgccagc gtcacatgct gtatctccgg atcttgcagt actgactgcc
     1501 ggaatacttc aaacttgtcc tgtgttgcag tgccgccgaa ccgaactgcc agtaattggc
     1561 ttccctgttc attcaacttt gtatttttta attcttccat ttggcggata acaataaatg
     1621 tataaatgac caggcccaag gcaactgtat attgaactgt aacgagactt ttgcggaaga
     1681 attcagcacg ttttcctttt accagttggc ctttcagcac ttgtacaggc ttaaagcgtg
     1741 ataagtatac tgcaggatat aagcctgaag cgacggtcat aaacaacaca acaccgctaa
     1801 caatggccat catatgcggc tgaaatatcg aagcgatcga aaacgatttg tttgcgagtt
     1861 gattgaatgg gtgaagaaaa gccagcacta aaataaatga caagatcaaa gcgcaaagtg
     1921 tcatgatgaa tgattcgagg aagaactgga gtgcgatctg tttcctgttg ctcccaaacg
     1981 attttcgaag ccccacttct ttcgatctct taacagagcg ggcagtagcc aggttcgtat
     2041 agtttatgca cgcgataagc attatcatca cggcaataat gctgaagatg ttgagataac
     2101 ttttattgcc gcgtgtgtta ttctcccatt caacctttgg atcaaaatgg aggtctgata
     2161 atttggtcgt aaatgccagg aatttcgcgc cgctcacccg gctaaaggaa tcagtttgga
     2221 tcatttgatt cgccaggcta tttaaagtag tgtttatcga ttggagattt gtattcggtt
     2281 ttagcacgac ataatcttca aaaaagttca catactggtc aaaacgcgaa ccttccatat
     2341 aatcattaaa atgttcaccc tgtatcgtgc gcattgcgtt caggttaaca atgtactcgg
     2401 gcttgaaatg cgaattggac ggatagtctt tgtaaacacc ggttaccatc agatctatgt
     2461 ccctgttctg cgtggcaaaa aaatgtttta gggaaatgat ctttcccatc gggtctgtgt
     2521 tgccaaatat cctgcgggct cctgtttcac ttaaagcaat cgtgttatcg ttggcgaaca
     2581 tcttctcttt attgccttta agcaggtcaa aatagatcac cttgtcaaaa ccgggttctg
     2641 cccatcttat ttcttcggtg agcacgatct tatccgccgg tttataatta agtgctgtcg
     2701 ggtaacctat ccaactggtg cgcgtggtat ataaaatatc gtctttgcga ttgtctttta
     2761 aataacgcaa gaaataaccg ggtgcaacag tattatcgaa atgttgcccg tcaccggtga
     2821 tataggtcgt gccgatgcga taagtgtctt tgtaatgcgg ctgtattgtg tcataacgca
     2881 gctcatcgct aacatataaa aagataaaca ttgcacttgc cagtgcgagt gctaacccaa
     2941 aaatattcag caatgaaaaa agcttttgac g
//
LOCUS       DASQJI010000685         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1629953,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000685 DASQJI010000000
VERSION     DASQJI010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1629953"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1269
                     /locus_tag="VEV83_18655"
     CDS             133..1269
                     /locus_tag="VEV83_18655"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK47207.1"
                     /translation="MKKIFAWFVFALAFFSSQAQYTIRFVVKEIAVKAQDDIYIAGNF
                     NNWNPSDPKSKLKPFGGGRRIIVLDNIDTGQYEFKFTRGNWAKVETTANGSDIANRFL
                     DVKGDTTVEITIAGWKDDFPEKPKPSTASSNVHVIDTAFFIPQLNRHRKIWIYLPASY
                     NQTKNKFYPVLYMHDGQNLFNIQTAAFGEEWGVDECLDTLEAQTKKECIVVGIDNGNE
                     KRTNEYNPYDNEKFGKGEGKEYIDFLVRTLKPQIDSSYRTLRDPDHTFIAGSSMGGLI
                     SLYALVQYPNVFSGAGIFSPAFWVVPQMFTDVQNTKWKKDLRIYFYAGEKESSQMVPD
                     MQKMLDIIKEKKCCTTEFVTSPAGEHKEKYWRDEFDDFYRWIMR"
     gene            complement(1519..1989)
                     /locus_tag="VEV83_18660"
     CDS             complement(1519..1989)
                     /locus_tag="VEV83_18660"
                     /inference="COORDINATES: protein motif:HMM:NF044381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47208.1"
                     /translation="MSDTSQQAMASALTSMNSQSNKAADAYPDFFPAAQKDFATRLKW
                     SVTPKYADANHEPVIKIEGPLAVFASPGETIRLNGNVSDPDGNSVSIKWWQFYVGTYS
                     GTVDILNANSAKAKVTIPKDAVAGQTIHVMLEATDNGTPALTSYQRIIITVRSK"
BASE COUNT          642 a          423 c          481 g          561 t
ORIGIN      
        1 taaataaaat ttcaaaggaa tctgttattg acggggtgag ttgaattagg aattaggaat
       61 taggaattag gaattaggaa ttaggaatta ggaattagga attaggaatt ggaattaaat
      121 ccgcaaagat cgatgaaaaa aatattcgca tggttcgttt tcgcgctggc ctttttttct
      181 tcacaagcac aatatacaat ccgctttgtg gtgaaagaaa tagcggtgaa ggcgcaggat
      241 gacatttata tcgccgggaa cttcaacaat tggaatccct cggatcctaa atcgaaatta
      301 aagccatttg gtggcggcag gcgcatcatt gttttggata atattgacac gggacagtac
      361 gaattcaaat tcacgcgcgg caactgggcg aaagtggaaa ccaccgcaaa cgggtccgat
      421 atcgcaaacc gttttcttga tgtgaaaggc gacacaacag tggaaataac gatcgcagga
      481 tggaaggacg attttcccga aaaaccaaaa ccgagcactg cctcttcaaa cgtgcacgtg
      541 atcgatacgg ctttctttat tccgcaactg aaccgccaca gaaaaatatg gatatatctt
      601 ccggcctcat acaatcaaac aaaaaataaa ttttatccgg tcctgtacat gcacgacggg
      661 caaaacctgt tcaatattca aaccgcagct tttggcgagg aatggggcgt cgacgaatgt
      721 ttggatacac tcgaagctca aacaaaaaaa gaatgcatcg ttgtcggtat cgacaatgga
      781 aatgaaaaac gcacgaacga atataacccg tacgataatg aaaaatttgg aaaaggcgag
      841 gggaaagagt acatcgattt tcttgtcaga acattaaaac cgcagatcga ttcaagctat
      901 cgcacattgc gcgacccgga ccatacattc atagcaggaa gcagcatggg cggattgatc
      961 tcgctatatg cgcttgttca gtatccgaat gtatttagcg gagccggtat attttcgccc
     1021 gctttttggg ttgttccgca gatgtttaca gatgttcaaa acacaaaatg gaaaaaagat
     1081 ctgcgcatct atttttatgc aggagagaaa gagagtagcc agatggtacc cgatatgcaa
     1141 aaaatgctgg acatcatcaa agaaaaaaaa tgttgcacta ccgaatttgt tacatccccg
     1201 gcgggagaac ataaagaaaa gtactggcgg gatgagtttg atgattttta ccggtggatt
     1261 atgcggtgag tgtttgaagt ttgggtttga tgtttgaggt tttaagttag ttgattggtt
     1321 tattagttga ttgggttatt gggtaattgg gaacggaatg attctaggac acagcgtcat
     1381 cacctgatcg ccgaatgttt gggttgccga ggcaagaaag aagaaaatcc tgttaatttt
     1441 caacatccga ttgaagcaac aatttcaaaa ttgaacagcc attcaccatt gacaattcac
     1501 aattcaccat tcacaagatc atttactcct tacagtaata attattcgct gataacttgt
     1561 aagagccggt gtgccattgt cagttgcttc aagcatcaca tgaatcgttt gccccgctac
     1621 cgcgtctttc ggaatggtta ctttagcttt cgcggaattc gcgtttaaaa tatccactgt
     1681 acccgaataa gtgcctacat agaattgcca ccatttaatt gaaacggaat ttccatccgg
     1741 atcagaaaca tttccgttca atcttatcgt ttctcccgga gatgcgaaaa cggcgagagg
     1801 cccttcaatc tttatcacag gctcatgatt agcgtctgcg tatttcggtg ttactgacca
     1861 tttaagacgg gttgcgaaat ccttttgcgc tgccggaaaa aaatccgggt atgcatctgc
     1921 agctttattt gattggctgt tcatggaagt gagagcagat gccattgcct gttgagatgt
     1981 atcgctcatc tggaacgaaa aattttgatc gtcgccatca ctcaacgcgc ggccacccca
     2041 accaccttac gaagccgctt gatatgcgcg caggccgtta ccgagcatat tcataaacgt
     2101 gaagtca
//
LOCUS       DASQJI010000686         2202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3012768,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000686 DASQJI010000000
VERSION     DASQJI010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3012768"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..544
                     /locus_tag="VEV83_18665"
     CDS             137..544
                     /locus_tag="VEV83_18665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47209.1"
                     /translation="MIKFSEIKMGDFLMGEFEGQMWEGEVIRLNHDEKQACLATDVQD
                     FWFDAENLYPIPITDAALRQLSFDREDMPDGSVKYKKGSFRILIIRPDDFTHMEIWYR
                     DDKRHNPQIQYVHQLQNHFLQMTKVHLNKEPIA"
     gene            623..>2202
                     /locus_tag="VEV83_18670"
     CDS             623..>2202
                     /locus_tag="VEV83_18670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47210.1"
                     /translation="MRCSFFFFFIFFSHSLLAQQFGGEPSSVRWKQVNSDTVRVIFPQ
                     GLDSIAKRIATITSKEQQEYNTLGSRLRKISIVLHTQTSFSNAFVTMGPWRSEFFLTP
                     SQNAFELGAMSWTDLLSVHEYRHVEQFSNFNVGLAHVMRVLFGENGQLLANGAAVPDW
                     FFEGDAVYNETLLSQQGRGRLPLFLNSYKSLYLENKHYSYMKLRNGSLKDYVPDHYPL
                     GYMLVAYGREKYGDDFWKNVTHDAAAFHSLFYPMQHAVKKYSNVSFDEFVQNAFSFYK
                     QQWTGQTLPDLQFLDSTQTNNVVDEKYPYAAADGSVIMLHDGFRDNPRFVVREKDGSI
                     KKIATQSICTDDYFSYNNGKVVYASFKPDPRWGNRQYGEIRLLDAATGGETKVVPAGL
                     DGSHHKFFSPDISHDGQKIAVIENNSDQKSFIHLLNISGQVIASLENFADHTYSYPKF
                     SSDDKFIYVCDRNAKGEMSILKGAVDDKNLTAIIPYANRIIGFPVVYRDTLFYSCSNN
                     GIDETWAYINSQQKSYRVA"
BASE COUNT          636 a          436 c          503 g          627 t
ORIGIN      
        1 ttgtgaagca ggggcaactt gttttgctac gctagatctg aaaactgcat cttttctgac
       61 caataaaaaa tataattcaa cgtaacggca acagataaaa aattatttct atctttttgc
      121 cgtaaaactt agcgatatga taaaattcag cgaaattaaa atgggtgatt ttctcatggg
      181 tgagtttgaa gggcagatgt gggaaggcga agtgatacgg ttaaaccacg atgagaaaca
      241 agcttgtctt gccaccgatg tgcaggactt ctggtttgac gcagaaaatc tttatcctat
      301 tccgattacc gatgctgctt tgcgccagtt aagctttgac cgggaagata tgcccgacgg
      361 ttcggtgaag tataaaaaag gttcgttccg gatcttaata atcaggccgg atgattttac
      421 ccacatggag atatggtaca gagacgataa aaggcataat ccacaaatac aatatgtaca
      481 tcagctccaa aatcattttc tgcaaatgac caaggtccat ttaaacaagg aaccgattgc
      541 ctgatgtttc tcataaaata atgatcgacc atcctgcgtt cacggggtgg tttttttttc
      601 atgatggatg taaacattaa cgatgcgctg ttcatttttc ttttttttca tatttttttc
      661 tcacagtttg cttgcgcagc aatttggcgg cgaaccttct tcagtcagat ggaagcaggt
      721 taacagcgac actgtgcgtg ttatctttcc acagggtttg gacagtatcg cgaaaaggat
      781 cgcaaccatc acttccaaag aacaacaaga atacaacacg ctcgggagcc ggttacggaa
      841 aatcagtatc gtgctgcata cgcaaacaag tttctcaaat gcatttgtaa cgatggggcc
      901 gtggcgcagc gagttttttc ttacgccatc tcaaaatgcg tttgaactcg gagcgatgag
      961 ttggacagac ctgttaagcg tgcatgagta ccggcatgtt gaacagttca gcaatttcaa
     1021 cgtcggcctt gcacacgtga tgagagttct gttcggtgag aacgggcagc ttcttgcgaa
     1081 cggagccgcg gttcccgatt ggtttttcga gggcgatgct gtttataacg aaacgctact
     1141 gagccagcag ggtagaggaa ggctcccgct gttcctgaat tcctataaga gcttgtattt
     1201 ggaaaacaag cattacagtt atatgaaatt gaggaacggt tcattgaaag attatgttcc
     1261 cgatcattat cctttaggct atatgctcgt tgcttatggc agggagaaat atggcgacga
     1321 tttttggaaa aatgtcacac acgatgcggc cgcttttcat tcattgtttt acccgatgca
     1381 gcacgccgtt aaaaaatatt cgaacgtttc ctttgatgag tttgttcaga atgcattcag
     1441 tttctacaag caacaatgga ccggccaaac actacctgat ttgcaattcc ttgattcgac
     1501 acaaacaaat aatgtggtcg atgaaaaata tccttatgcc gcagcggatg gttcggttat
     1561 tatgttgcat gacggtttta gagacaaccc aagatttgtg gtgagggaaa aggatggtag
     1621 tatcaaaaag atagcgacac aaagtatttg caccgacgat tatttttctt ataataatgg
     1681 caaagtcgta tacgcgtcgt ttaaacccga tccacgatgg ggcaacaggc aatacggcga
     1741 gatcaggttg ctagatgcgg ctacaggggg cgaaacgaag gttgttccgg cgggcttaga
     1801 tggtagccat cataaatttt tctcgcctga tatttcgcac gacggacaaa agatcgcggt
     1861 tattgaaaac aactctgatc aaaaatcatt catacatctt ttaaatattt caggtcaagt
     1921 catagcgtca ctcgaaaatt ttgcggatca tacttactcc tatcccaagt tttcttcaga
     1981 tgacaagttc atctacgtct gcgatagaaa cgcgaagggg gaaatgagca ttttaaaagg
     2041 cgccgttgac gataagaatt taacggcgat cattccgtat gcgaacagga tcattggttt
     2101 tcctgttgtc tatagggaca ctttatttta ttcatgttca aacaatggca ttgatgagac
     2161 ctgggcgtat atcaattcac aacagaaatc ctatcgtgtt gc
//
LOCUS       DASQJI010000687         6646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2093544,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000687 DASQJI010000000
VERSION     DASQJI010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6646
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2093544"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VEV83_18675"
     CDS             complement(<1..980)
                     /locus_tag="VEV83_18675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK47211.1"
                     /translation="MEEGIRQKHDPFESIKIPEYRSLLAGRFLFVTALRMITTVCGWW
                     IYNLTNDPLAIGVLGLSEVIPAISFALYAGHVIDKSEKRKMLLRGVSLYFVCAALLLL
                     LATSLTSNYLSNHWIAICIYVIIFTTGLIRAFIGPIFGVVLASIVPRNLLQNATTWNQ
                     GTWLSASVTGHAMGGLMIATLGNAGSFGVVSALIAAAFTMILKLKPKPAHADIKEKAT
                     WESVKEGLRYVFKTKEILGALSLDMFAVLFGGAVAMIPVYARDILKVGPVGFGWLNGA
                     GDIGDIIMVMILTLFPLRRKQGLRLLYAVFGFGISIIVFALSENYLLSFTA"
     gene            complement(1038..1670)
                     /locus_tag="VEV83_18680"
     CDS             complement(1038..1670)
                     /locus_tag="VEV83_18680"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019136 - deoxynucleoside kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HYK47212.1"
                     /translation="MQYHYIAIEGNIGAGKTTLAHLLSKKLNARLILEQFSDNPFLPK
                     FYENPKQFAFPLELFFMAERYKQLKEMINTNDLFQNVTISDYVFSKCLLFAKVNLAEE
                     EFRLYQKLFDIIQQQLAFPDLIIYLHSPVEKLQKNIRKRNRAYEQTIPDEYLFKIQET
                     YTSYIKQHNIRTLFIDASNADFLGNEQHLQLVANALDGEIGSVQQYLMLP"
     gene            complement(1695..2186)
                     /gene="folK"
                     /locus_tag="VEV83_18685"
     CDS             complement(1695..2186)
                     /gene="folK"
                     /locus_tag="VEV83_18685"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HYK47213.1"
                     /translation="MNTAFLLTGGNLGNRFQNLELAHKHIQRSCGDVIAVSPMYRTAA
                     WGFAEQPDFYNQALQLQTFLSPDALMLALLSIEEKMGRKRTVKLGPRTLDIDILLMND
                     LVYSSPIVTIPHSHLQERRFALTPLADIGANVIHPVFKKTINQLLHECADTLSVYKIS
                     GAE"
     gene            2243..4003
                     /gene="sppA"
                     /locus_tag="VEV83_18690"
     CDS             2243..4003
                     /gene="sppA"
                     /locus_tag="VEV83_18690"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HYK47214.1"
                     /translation="MKSFLKIFFASLVALIVFGAAVFFGISIIITSAASPSKPDIGSN
                     AVLVLDLNNSFNEQAKNDPVHNFFGDPSSDIPGLYDMVRLINYAKKDSAIKGIYIKAG
                     DNENGYAASEELRQALLDFKKSKKFVIAYGNVIPERAYYVAMVADKIYCNPAGGVEWD
                     GFSADFLFMKGLLDKLEINPQVFYAGKFKSATEPFRVSQMTDANRLQTTVWVNDLYSN
                     LLVRAAAARNSDTAQLHQLANTGAVQTANDALKYHFVDGLRYDDEIKDELLRKLHKTK
                     KDEINFIAFGKYARAVQFQKTGGDAKIDIIYAQGDIVDGKGDKDQVGSDDFVRLIRKA
                     RLDDDVKAIVFRVNSPGGSSMASEAIWREISLAKKAKPVVVSMGDYAASGGYYISCAA
                     DSVFADETTITGSIGVFSILPDMKQFFNDKLGITFDGVKTGPYADMGSIARPLTDQEK
                     HFIQASVDTIYNTFKKRVADGRRKDTAYIDSIAQGRVWTGKRAITVGLVDRTGTLQDA
                     LNCAARMANLTNYRTREYPEAKTWLEELTGQSYAAESKEKATIKDIGQQQYDLLQSVK
                     QLKEIVGIPQTRLPFTVQFN"
     gene            complement(4051..4713)
                     /gene="pdeM"
                     /locus_tag="VEV83_18695"
     CDS             complement(4051..4713)
                     /gene="pdeM"
                     /locus_tag="VEV83_18695"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HYK47215.1"
                     /translation="MKHQHFYFREQHFWLSPERVIFWEDEKALILSDSHFGKTGHFRK
                     SGVPVPQYLFLEDLQRLFSLLQFYKPDQLIVVGDFFHSRANKELLLFEKWRNDVSQLE
                     IRLVKGNHDILKESWYEQTKINVYAGEPMRINSLGFIHDCADIDDYPQHNDAYFMTGH
                     IHPGIYLKGTSRQSLRFPCFYFAESFAILPAYSKFSGIALVEKRKNDKVFAIINSELM
                     EV"
     gene            4748..5134
                     /locus_tag="VEV83_18700"
     CDS             4748..5134
                     /locus_tag="VEV83_18700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47216.1"
                     /translation="MKIKIVIGGKIPDKYTNNGEELCQIEINAQFIIEKKNEQVVQAE
                     ADNGEEHKSLKIRSCVTTRCVKRPLQVPKEIVYDRDRKAEAVCNIFIEAKFFFAKPRN
                     KKIHAHPKKTDNAKLENFFHKLHVAK"
     gene            5222..6049
                     /gene="map"
                     /locus_tag="VEV83_18705"
     CDS             5222..6049
                     /gene="map"
                     /locus_tag="VEV83_18705"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HYK47217.1"
                     /translation="MILYKTDAEIELMKKSAVLVSQTLTEVANILKPGVTTFQLDKLC
                     FEFIRDHKAFPSFLNYRGYPYTICASVNDVVVHGFPNNVALKEGDVVSIDMGVILNGW
                     HGDHAYTFLLGEASDDVLQLLRVTKESLYKGIEKAISGNRVGDISFAIQEHTERKHGY
                     GVVRELVGHGLGRSLHEDPQVPNYGKRGTGPKLRENAVVAIEPMINMGTRDVYTEDDG
                     WTVKTRDGKPSAHFEHDVCVKKNKALILSDYSIIEAAEKNNPNLNTSYAQKLSSVTN"
     gene            complement(6262..>6646)
                     /locus_tag="VEV83_18710"
     CDS             complement(6262..>6646)
                     /locus_tag="VEV83_18710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47218.1"
                     /translation="IGNKLDLYDEHAHRVYNYTLDYDTYRGNYTYIFSIKPKEDLGLF
                     QRGDIVVDEMTTWFDARTMEVVARNYTLSYKAGLYDFNVTMQVEMTRIGDLLVPETMR
                     YKGNFSVVTKKRERGEFTATLFDFK"
BASE COUNT         1939 a         1450 c         1475 g         1782 t
ORIGIN      
        1 gcggtaaaag aaagaagata attttctgac aacgcgaaca caatgatcga aattccaaac
       61 ccaaacaccg cgtacaacaa tcgtaacccc tgtttgcgtc gcaacggaaa taaagtgagt
      121 atcataacca tgattatatc gcctatgtcg ccggcaccat tcaaccagcc aaaaccaact
      181 ggccccactt tcaaaatatc ccgtgcatat accgggatca ttgccactgc tccgccaaac
      241 agcaccgcaa acatatcaag tgaaagcgcg cccaggatct ctttcgtttt aaacacataa
      301 cgaagtcctt cttttacgct ttcccatgtc gctttttctt ttatgtcagc atgggcgggt
      361 ttaggtttga gtttcagtat catagtgaat gctgctgcaa ttaatgctga tacaacgcca
      421 aagctgcctg cattgccaag cgttgcgatc attagtccac ccatcgcatg gccggtcaca
      481 gacgcggaaa gccatgttcc ctggttccag gtcgtcgcat tttgcaataa attcctcggc
      541 acaatgctgg cgaggacgac accgaatatc ggcccgatga atgcacgaat aaggccggtg
      601 gtaaagatga tcacataaat acaaattgct atccagtgat tgcttaaata atttgatgtg
      661 agcgatgttg ccagcagcag taacaaagca gcacaaacaa aatacagcga cacgccgcga
      721 agcagcattt ttcttttttc acttttatca atcacatgcc ccgcataaag ggcaaaggag
      781 atcgccggga tcacttctga caaacccagc actccgatag caaggggatc gttggttaag
      841 ttatatatcc accagccgca cactgttgtg atcatgcgta atgcggtcac aaacaaaaaa
      901 cgtcccgcca gcagacttcg gtattcgggt atctttatcg actcaaatgg atcatgcttt
      961 tgtcttatgc cttcttccat tccttatttc attattgctg ctttgaacga ttgcttattg
     1021 ttattccaaa atagattcta aggcaacatc aggtattgtt gcacactgcc gatctcacca
     1081 tcaagcgcgt tcgctacgag ctgcaagtgc tgttcattcc ccaaaaaatc tgcattgctt
     1141 gcatcgatga acaatgtgcg tatgttatgc tgttttatat agcttgtata cgtttcttgt
     1201 atcttaaaca aatattcatc cggtatcgtt tgctcatatg cacgattgcg tttcctgata
     1261 tttttttgca atttctcgac cggtgaatgg aggtaaatga tcaggtcagg aaatgcgagt
     1321 tgctgttgaa tgatgtcgaa caatttttga tataaccgga attcttcttc agccaaattc
     1381 acttttgcga acaacaagca cttggaaaaa acataatccg agatcgtaac attttgaaac
     1441 aggtcgttcg tgttgatcat ctccttcaac tgtttgtagc gctcagccat gaagaagagt
     1501 tcgaggggaa atgcgaactg ttttggattt tcataaaatt ttggaagaaa cgggttatcc
     1561 gagaactgct caagtattaa acgtgcgttt agttttttag agagcaaatg agcaagggta
     1621 gtttttccgg caccaatatt cccttcgatc gctatgtaat gatattgcat cggtttcaaa
     1681 attaccggcg aagcttactc agcgcccgaa attttataca cagacagtgt gtccgcgcat
     1741 tcgtgcaaca attgatttat cgttttctta aaaacaggat gtattacatt tgcaccaatg
     1801 tcagcaagcg gtgttaacgc aaaccttctt tcctgcaaat gagaatgtgg aatggtgaca
     1861 atcggcgagc tatagacgag gtcattcata agcaaaatgt caatgtcgag agtccgtggc
     1921 cctaatttta cagtgcgttt ccttcccatt ttttcttcaa ttgaaagcaa ggcaagcatc
     1981 agcgcgtcag gtgagagaaa agtttgaagt tgaagtgcct ggttataaaa atcaggttgt
     2041 tcagcaaagc cccaggccgc agttctatac atcggagaaa ctgcaattac atcgccgcac
     2101 gatcgttgaa tatgcttatg cgccaattcc aggttttgaa agcggttacc gaggttacca
     2161 cccgtaagca gaaaagcggt attcataaat tggctgaata actgcctcaa atatctttat
     2221 ttttgaacgc tatcagatta atatgaagag ttttttgaag atctttttcg cttccttagt
     2281 agccttgatc gtattcggtg ctgctgtttt tttcgggatt tctatcatca taacaagcgc
     2341 tgcctcacct tctaaaccgg atattggttc taacgccgta ttagtacttg acctgaataa
     2401 ctcattcaat gaacaggcaa aaaatgatcc ggtgcacaat ttcttcggcg atccgtcatc
     2461 cgatattccc gggctgtatg acatggtgcg cttaataaat tacgcgaaaa aagattctgc
     2521 gatcaagggc atctatatca aagcgggtga taatgaaaat ggatacgcgg ccagcgaaga
     2581 gttgcgccag gcattgcttg attttaagaa gagtaagaag ttcgtgatcg cttatgggaa
     2641 tgtgatcccg gagcgcgctt attatgtcgc gatggttgcc gataaaattt attgtaaccc
     2701 ggcaggaggc gttgaatggg acgggttttc agcagacttt ctttttatga agggattatt
     2761 ggataaactc gagatcaatc cccaggtttt ttacgcagga aaattcaaaa gtgcaacaga
     2821 gccatttcgt gtttcgcaaa tgacggatgc gaaccgttta caaactaccg tttgggtaaa
     2881 tgatctttat tctaatttat tagtacgtgc cgcggcagca agaaacagtg atacagctca
     2941 actgcatcag ctcgcgaata caggcgccgt tcaaacagca aatgatgcgc ttaaatatca
     3001 ttttgtcgac gggttaagat atgacgatga gataaaggac gagttgctaa ggaaactgca
     3061 taagacaaaa aaagacgaaa taaattttat tgcatttggt aaatatgcga gggctgtaca
     3121 gtttcaaaag acgggcggtg atgcaaagat tgatatcatt tatgcgcagg gtgacatcgt
     3181 agacggcaaa ggagataaag accaggtagg aagcgacgac tttgtacggc tgatacgaaa
     3241 ggcacgactg gacgatgacg tgaaagctat tgtttttcgc gtgaattcac caggcggaag
     3301 ctcaatggca agcgaggcca tatggcggga aatttccctg gcgaaaaaag caaaaccggt
     3361 tgtagtgagc atgggcgatt atgcagcgtc gggcggctac tacatttcat gcgccgcaga
     3421 ttctgtgttt gcagatgaaa ctaccatcac aggatctatc ggagttttca gcatcctgcc
     3481 cgatatgaaa caatttttca acgataaact cggcattact ttcgacggcg tgaaaacagg
     3541 tccttatgcc gatatgggtt cgatcgcgcg gccacttacc gaccaggaaa agcacttcat
     3601 ccaggcttct gttgacacga tctacaacac attcaaaaaa agagttgcag acggacgaag
     3661 aaaagacacc gcttacattg acagcattgc gcaagggcgc gtgtggacag gcaagcgcgc
     3721 tataactgtt ggcctcgttg accgcaccgg cactttacag gacgcgctta attgtgcggc
     3781 acgaatggct aatctcacta attacagaac aagggaatac ccggaagcaa aaacctggct
     3841 tgaagaactc accgggcagt cgtacgcggc tgaatcaaag gaaaaggcaa caataaagga
     3901 tatcggtcaa cagcagtatg accttcttca aagtgtgaaa cagttgaaag aaatcgtcgg
     3961 aattccacaa acacgtttgc cgtttacagt gcagtttaac tagcgaccgg tcaccagttg
     4021 ccggtaaccg gccactggca acatattcat tcacacctcc atcagctcac tattaataat
     4081 cgcgaagact ttatcatttt ttcttttctc gaccaatgca attccactga attttgaata
     4141 tgcaggcagg atcgcaaatg attcggcgaa ataaaaacaa gggaatcgca gcgattggcg
     4201 gctcgttcct ttcaaataaa ttcccggatg aatgtggccc gtcataaaat acgcatcgtt
     4261 atgctgtggg tagtcgtcaa tatctgcgca atcatgtata aatcccaatg aatttatccg
     4321 cattggctca ccagcgtaca catttatttt cgtttgctca taccagcttt ccttcaggat
     4381 atcgtgattg cctttgacca accttatctc aagttgtgaa acatcgtttc gccatttttc
     4441 aaacagcaaa agttctttgt tggccctgct atgaaaaaaa tctcctacca cgatcaactg
     4501 gtcaggttta taaaattgga gcaatgagaa caaacgttgc aggtcctcca ggaacaggta
     4561 ctgtggcacc ggcacgccgg atttacgaaa atgtccagtc ttgccgaaat ggctgtctga
     4621 taaaatgagc gctttttcat cttcccaaaa gatcacccgt tccggcgaca accagaaatg
     4681 ctgctccctg aaataaaaat gttgatgttt catgttagca tcgcctcaac aaagtagcct
     4741 cacgttaatg aaaattaaaa tagtcattgg cggcaaaatt ccagataaat acacaaataa
     4801 tggcgaggaa ctttgccaga tagaaattaa tgcccagttt atcattgaaa agaaaaatga
     4861 acaggttgtt caggccgagg ccgataatgg agaagagcac aaatcgctca aaataagaag
     4921 ctgtgttact acccgttgcg tgaaacgtcc acttcaggtt ccaaaagaaa ttgtttacga
     4981 ccgcgatcga aaagccgagg ctgtttgcaa catatttatt gaagcgaaat ttttctttgc
     5041 aaagccacgt aataaaaaaa tccacgcaca tcccaagaag accgacaatg ccaaacttga
     5101 aaactttttc cataaactcc atgttgcaaa ataaatgtag ttcgcagttc ttcatcgata
     5161 cgttatgccg atagttgaaa tattttcttc acatttgcac caattgagca ggagatacaa
     5221 tatgatccta tataaaacgg atgcagaaat agagttgatg aaaaaaagtg cggtgctggt
     5281 gagtcaaacc ctgaccgagg tcgcaaacat cctgaaaccg ggcgtcacta catttcagct
     5341 tgacaaattg tgctttgaat tcatccgaga ccataaagcg tttccatcgt ttctcaacta
     5401 tcgcggttat ccatatacca tttgtgcatc tgtaaacgat gtggtggtgc atggttttcc
     5461 taacaatgtt gccttgaaag aaggtgatgt tgtttccatt gacatgggcg tgatattgaa
     5521 cggctggcac ggcgaccatg cttatacgtt cttgcttggt gaagcgagcg atgatgtgtt
     5581 gcaattgctg cgggtgacta aagagtcgtt atataaaggg attgaaaagg caatttccgg
     5641 aaacagggta ggagatatct cttttgcgat acaggaacac acggagcgca aacatggcta
     5701 cggcgtggta cgcgagctgg tcgggcatgg gctgggcaga agtttgcacg aagatccgca
     5761 ggtcccgaat tacggcaagc gcggtactgg tccaaaacta agagaaaatg cagtggtcgc
     5821 gatcgagccg atgataaaca tgggcaccag ggatgtgtac actgaagacg acggctggac
     5881 ggtgaagacg cgcgacggga aaccttcggc tcattttgaa cacgatgttt gtgtcaaaaa
     5941 aaataaagcg ctgatacttt cagattattc gatcattgaa gctgcagaaa aaaacaatcc
     6001 aaacctgaat accagttacg cgcaaaaatt aagtagcgtt acaaattaag tgacagcacc
     6061 attgcaccgt cacctcgaca taaaggaggt ctccgcgtct cttccattaa gattttcagg
     6121 gatgtctcct gtcgtcgaca tgacgaaacg tttgttcttt ttttagaaag tgcaatcttg
     6181 ccattaactc aatcttggtg gcctttgtga aatccttcgt gcccgttgtg ttccattctt
     6241 caaacacaat ctgcaagcga actatttaaa gtcaaacagc gttgctgtaa attctccgcg
     6301 ttcgcgcttt tttgtaacga cgctgaagtt gcctttgtag cgcattgtct ccggcacaag
     6361 gaggtcgccg atgcgtgtca tttcaacctg catcgttaca ttaaaatcat agaggccggc
     6421 tttataactg agcgtgtaat ttcttgcaac aacttccatt gtgcgggcat caaaccatgt
     6481 cgtcatttcg tctacgacga tgtccccgcg ttgaaaaagt ccaaggtcct ctttcggctt
     6541 gatcgaaaaa atgtatgtgt agttgccgcg gtatgtatca tagtcgagcg tgtagttata
     6601 aacgcgatgc gcatgctcat cgtaaagatc aagcttattt ccgatc
//
LOCUS       DASQJI010000688         9245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1938667,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000688 DASQJI010000000
VERSION     DASQJI010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9245
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938667"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1010
                     /locus_tag="VEV83_18715"
     CDS             <1..1010
                     /locus_tag="VEV83_18715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47219.1"
                     /translation="SYYSSLNSQYESFRNTLLQNPAIKDVGRSSRIPTGRLLDGMGAS
                     APGNDSMVPVKADIRYVAVDYDFLPTYGVHIIAGRNFSRAYGTDTAGFILNEAAVKAV
                     GWKSAQQAVGKNFQYGFINNGRIIGVMNDFHFESLHQQIPPMILIMPSVPANQSFFNY
                     VSVKISGNNIAAALATIKDAWQKYLPELPYEYTFLDENFSKLYESEQRQETIFTVFAC
                     ISIFIACLGLFGLSAFAISQRVKEIGVRKVLGANVSTIVALLSKEFVMLVLIAAPFAF
                     GIAWYAMHEWLQDFAYRINIQWWVFVVAALAALLIALATVSFQAIKAALANPVNSLRT
                     E"
     gene            1225..3645
                     /locus_tag="VEV83_18720"
     CDS             1225..3645
                     /locus_tag="VEV83_18720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47220.1"
                     /translation="MFKNYLKVALRNLWKNKAFSAINIIGLATGLAVCLLIVLYVINE
                     LAYDKYNVNADRIYRIDADIYFNNTQFTSATTPEPLGPTLMREFPHVEQMVRFNSQGD
                     ISIKKGAQTIQDQHAVFTDSTFFKVFSIHMIEGDPNTALNEPNSIVIDETAAKRYFNS
                     TDVLGKTLYVDNSTNCKITGVIKDIPQQSHFHFSFLRPLMDTYRGNANEWLSNNDQSY
                     ILVKPGVTQATIQADVDKVVKKYVYAELQSLFHATPEEMERQGNYFRFHLMPLTDIHL
                     YSDKSYEFEANGNITYVYIFSLIAIFILLIACVNFMNLSTARSSNRAKEVGVRKVAGS
                     LRSHLITQFLTESVLISFFSLLLAITLAALLLPLFNQLAGKEMHVSTLFSSWLLIALV
                     SLVLLVGVIAGSYPAFYLSSFQPIDVLKGHIAKGFRNSWLRSSLVVFQFCISIILIIG
                     TIVIYTQLNYLRSREIGYDREQVLILHNTWPLDKQIKSFRQELLKMPGVENATITSNL
                     PTANNFNQNGWFRDATLDANKAVVFTDFRVDENYIPTLGMQMAKGRNFSLDFPSDSAA
                     VILNEAAVQLLGLKDPLNQLLYRPVDDGAKPGAFHIVGVVKDFNYSTMHDKVGPLIIE
                     FGENNGSIALRINSKNIPTLMRNVQAKWNSFVPGQPFNYTFMDADFNNVYKADQRTGK
                     LFISFAVFAIFIACLGLFGLVTYAAEQRTKEIGIRKVLGANVGGIVTMLSKDFAKLVL
                     IASLIAFPVGWLAMNKWLEGFAYRINISWWVFIVAGVGAIAIALITVSVQAIRAAVAN
                     PVRSLRTE"
     gene            3842..6238
                     /locus_tag="VEV83_18725"
     CDS             3842..6238
                     /locus_tag="VEV83_18725"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47221.1"
                     /translation="MFKNFFISAWRNLSRNKTYTVLNVSGLTIGVVVCLLIGVWLQRE
                     LSFDNFHPNGDKIFRLVNTFKSESESFSQEPSGPAFGAQLPKQLPAVPSACRLFSDKY
                     KLQEGDKQFFESNVLDVDPNFFQFFGFRLKEGRAKTCLQSFDQVVLTEKLAQKYFGKE
                     DPVGKTINIDNTPFAVTGVAENPPVNSNIQFDALVSSAFLKKRMKDNYNFDIDSMWVG
                     GWPDTYVEVSDPAKWKETEKQINQVAFKFEEKDWKENKMSYQYFLQPIRDIHLKSHLR
                     YDSANNGSLALVNIFSIIGIIVLLLACINYINLTTAGAIKRAKETSVRKVIGATKPQL
                     IRQFFFETFIICTFAVCLGVVICKIVLPQFSAWIGESYDFPLNLTNVLIISGFVIFIS
                     AVSGIYPASILSSFNPAVALKGNFSQSKRGNVIRKTLVVFQFTITIALVASVFIITQQ
                     MNYVRNKSLGFNGSAVIEVKFNADENVVQHYSSIRSELLKSPYVLNVSKHGQNVVGGL
                     GNGWTTTVNLKGEEISTSLYGMSVDADYFKTYDMKLAAGRFFSKDIPTDTTKALLVNE
                     AAVRTFGWKKPENAIGKPFGKGEDQQYVIGVVKDFNFENLHKPVEALRIGYEREGRRI
                     SLKVNAAHIDEAIAQLKTTWSKLVPTVPLQYDFVDDEIEEQYGSEQKMEGIFYAFSGL
                     SLLIACLGLFGLSTFVVERKIKEIGIRKVLGASVSGIVGLLSQDFLKLVLISILIATP
                     LAWYFMNNWLQDFAYRIDISWWVFAVAGLIAVFIALVTVSIKSIKAAVANPVKSLRTE
                     "
     gene            6344..8803
                     /locus_tag="VEV83_18730"
     CDS             6344..8803
                     /locus_tag="VEV83_18730"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47222.1"
                     /translation="MFKNYLKVALRSLSKRKGYSVINILGLAIGMAVCLLIVLFIESE
                     LSYDDWQLKGDNIYRVVLERRYPGRSTSYSTIPLSIGPAIQKEYPEVVECTRLFDFGG
                     NGNFFLRIGEKIFEESRVIAADSNFFRVFTGRLIEGDSSTALVKPNSVVLNETTAKKY
                     YGSAGAAINKTFLTDDGNGQTRTYMITGVCRDWPDNSHFLFDLVISTSSFEFLKQPNY
                     TGFSAYTYLLLNPHASPQALEKKFPEILKKYVAGEVGRSFGETWEQFQAEGNGYHYYL
                     QPLKQIHLISHLEAELRPNGNITTVYIFAVIAVFILLLACINFINLSTARSVERAREV
                     GIRKTFGSNRRSLVWQFLLESMVISLASMLIAFGLIALLLPLFNQVAGKQLSLLSFLT
                     PGKLALLVAFAITVGLIAGLYPAFVLSSFKPTTVLKGKFKSNTFGLALRNGLVVIQFS
                     ISVILIVATIVVNKQLRYMMSGAVGFNKDHVISIERTDLLEDQTKSFENELAKIPGVE
                     TVSGGTALPGQQNFFGVPYQQVGSKESMTARGIVVDDQYAKLLGLQMKEGRFFSKDFS
                     TDSLAVVLNEKAVADFGLKKPIGARLTSLDPQFNAPDGTPYVYTVVGVIKDFHFQSLH
                     EKISPLIINNNSKFGGRSPFVALRVNTNNFDQTLTAIQNTWKKFVPERPFHYSFLDQT
                     LAAQYDAEQTTQKVFTIFSVLAIFIASMGLLGLAAYTTQLRNREISIRKVLGASVGNI
                     VTMLSTDFLKLVLIAALIAFPVSWLFVNKWLENFAYRINISAWIFLIAGLAAVVVALL
                     TISFQAIKAAVTNPVTNLRAE"
     gene            9048..>9245
                     /locus_tag="VEV83_18735"
     CDS             9048..>9245
                     /locus_tag="VEV83_18735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HYK47223.1"
                     /translation="MKHFLLLLSLIPAFAQTQTIDSAIAKNVREIIPKVVEWRRHFHQ
                     NPELSTREYKTGAFVADYLKSL"
BASE COUNT         2544 a         1921 c         2159 g         2621 t
ORIGIN      
        1 ttagttatta cagctcgctg aatagccaat atgagtcgtt tcgcaatacg cttcttcaaa
       61 atcccgctat caaagatgta ggtcggtctt cgaggatccc cacaggcaga ttgctggacg
      121 gtatgggtgc atctgcgcct ggcaacgatt caatggtgcc ggtaaaagct gacatcaggt
      181 atgttgcggt cgattatgac ttcttgccga cgtatggagt acatatcatc gcaggcagaa
      241 atttctcacg cgcatatgga actgacactg ccggtttcat cctcaacgaa gccgcggtaa
      301 aagcggtcgg ctggaaatca gcacagcaag ccgtcggtaa aaactttcag tatgggttta
      361 taaataatgg gcggatcatc ggcgtaatga acgattttca ttttgagtca ctgcatcaac
      421 aaatcccacc tatgatcctt atcatgcctt ccgttccggc gaatcagagt ttttttaatt
      481 atgtctcagt aaaaatttcc ggtaacaata ttgcggcggc tcttgcaact atcaaagacg
      541 cgtggcaaaa atatttgcct gaattgccat acgaatacac cttcctcgat gaaaactttt
      601 cgaaactcta cgaatcagaa caaaggcagg aaacgatctt cacggtcttc gcatgcattt
      661 caatatttat tgcatgtttg ggtttattcg gtttgtcggc attcgccatt tcgcagcgcg
      721 taaaagagat tggtgtaaga aaagtactcg gagcaaacgt aagcacgatc gtcgcgctcc
      781 tttcaaaaga atttgttatg ctcgtactga tagctgctcc atttgctttc ggcattgcct
      841 ggtacgccat gcatgagtgg ctgcaggatt ttgcgtaccg catcaacatt caatggtggg
      901 tgttcgtggt ggctgcgttg gccgcacttt tgatcgcact ggcaacggtg agtttccagg
      961 cgataaaagc agcgctggcg aatcctgtaa atagcttgag gactgaatga cgagatgagt
     1021 aatgagtgat cagtaatgag tgacagcctg atgaattgtg aattgaaaat gccggtgcat
     1081 cgttcacttt aacgtccgta gcaatgggtc cgaaggactg aaatccgcat acccctgaac
     1141 gaaattcagg gtgagaatga tgaatggcgg ttttagtcgt aacataattt ttgatttgaa
     1201 cgtcttagct gaaaacatag agacatgttc aaaaattatt taaaagtagc attgcgcaat
     1261 ttgtggaaga acaaggcatt ttccgccatt aacatcattg gtctcgccac agggctcgct
     1321 gtttgtttgc tgatcgtttt gtatgtcatc aatgaactgg cttatgataa atacaacgtg
     1381 aatgctgatc gcatttaccg catcgacgcg gacatttatt tcaacaacac acagtttacc
     1441 tcagccacaa caccagagcc actcggcccc acactcatgc gcgaatttcc gcacgtagaa
     1501 caaatggtgc ggttcaattc gcagggcgac atatcaatta agaaaggtgc tcagaccatc
     1561 caggaccagc acgctgtttt taccgactcc acttttttca aagtgttttc cattcacatg
     1621 atcgaaggcg acccgaatac agctttgaac gagcctaatt cgatagtcat cgatgaaacc
     1681 gcggcgaaac ggtatttcaa cagcacagat gttttgggaa aaacactgta cgttgataac
     1741 tcgacaaatt gtaagatcac cggtgtgatc aaggacattc cacagcagtc gcattttcat
     1801 tttagcttcc tccgaccatt gatggacacg tatcgtggga acgcgaatga atggctgagc
     1861 aacaatgacc agtcttatat cctcgtaaaa cccggtgtta cgcaggcgac catacaggct
     1921 gatgtggaca aggttgtaaa gaaatatgta tacgcagagc ttcagtcgct ctttcatgca
     1981 acacccgaag aaatggaacg ccagggaaat tattttcgtt ttcatttgat gccgctgacc
     2041 gatatccatt tgtattcaga caagtcttat gaatttgaag cgaacgggaa tataacctat
     2101 gtctacattt tttccctgat tgctattttt atcttgctta ttgcatgcgt aaatttcatg
     2161 aacctttcaa ctgcgagatc ctcaaatcgt gcaaaagaag taggcgtaag aaaagttgcg
     2221 ggttcattac gttcacacct catcactcaa tttcttactg aatcagtttt aataagcttc
     2281 ttttctttat tgctggccat tacgctcgct gctttgttgc ttcctttgtt caaccagcta
     2341 gcaggcaaag aaatgcacgt aagcaccctg ttctcttcct ggttgctcat cgcgttggtt
     2401 tcgttagttc ttcttgtggg cgtgatagcc ggcagctatc cggcgtttta tttgtcgtcc
     2461 tttcaaccca tcgacgtgtt aaaaggccat atcgcaaaag gttttagaaa cagttggttg
     2521 cggagcagcc tcgtggtgtt ccagttctgc atttcgatca ttctgatcat tggcactatt
     2581 gtcatttaca cacagctaaa ctatttgcga agcagggaga tcggctacga ccgcgaacag
     2641 gttttgatcc tgcataatac gtggccgctc gataaacaaa taaaatcttt caggcaggaa
     2701 ttgttgaaga tgcccggcgt cgagaatgct acgataactt ccaatttgcc gacggcgaac
     2761 aacttcaatc aaaatggctg gttccgcgac gctacacttg atgcaaacaa agcggttgta
     2821 tttacagatt tcagggtcga cgaaaattat atacccacgt taggtatgca gatggcaaaa
     2881 ggaagaaatt tttcgcttga ctttccttcg gattctgctg cggtgatctt aaacgaggct
     2941 gcagtgcaac tgctcggatt aaaagatcct ttaaaccagc tgctatatcg cccggttgat
     3001 gatggtgcga agccgggcgc ctttcatatt gtgggcgtag tgaaagattt taattacagc
     3061 acaatgcatg ataaggtggg gccgctcatt attgagttcg gtgaaaacaa cggcagcatc
     3121 gcattacgca tcaattcgaa aaatattcct acgcttatga ggaacgtgca agctaaatgg
     3181 aacagttttg tgccgggtca gccttttaat tacacattca tggatgctga tttcaataac
     3241 gtttacaaag ctgatcagcg caccggcaag ttgttcatca gttttgcggt attcgcaatc
     3301 tttattgcat gcctcggttt gttcgggctg gttacgtatg ccgcagaaca acggacaaaa
     3361 gaaatcggga tacgaaaggt gcttggcgca aacgtcggcg gcatagtaac aatgctttcg
     3421 aaagattttg caaagcttgt attgatcgcc tcgctcattg catttccggt tggatggttg
     3481 gcgatgaaca aatggctgga gggttttgca tatcgtatca atatcagttg gtgggtgttt
     3541 atcgttgcgg gcgttggagc gatcgctatt gcgctgataa cagtaagcgt ccaggctatc
     3601 agggcggcgg tagcgaatcc tgtcaggagt ttgagaacgg aatgaggaaa tgagtaatga
     3661 gtaatgagtc gcgatgtcgg tggtggaagt ccgaaggact ttaatccgat tagccctgaa
     3721 tgaaagtcca taagttgagg atcgaatgaa tggtgcgtcg gcaatcgtgc aagtccgaag
     3781 gacttcaatc tgattagccc cgaataaaat tcggggtacc gaatcaaaaa ttcgcaaagc
     3841 tatgttcaag aattttttca tcagcgcctg gcggaatctc agccgcaaca agacgtacac
     3901 agttctaaat gtgtcagggc ttacgatcgg cgttgtcgtt tgcctgttga tcggtgtgtg
     3961 gctgcaacgc gaattaagct tcgacaattt tcatccgaac ggcgataaga tatttcgttt
     4021 ggtaaacact ttcaaaagcg agagtgaatc attttcacag gaaccttcag gacccgcatt
     4081 tggcgcgcaa ctgccgaaac aattaccggc tgtgccttcg gcatgcaggt tgttttctga
     4141 taagtacaaa ctccaggaag gagataaaca attttttgag tcgaatgtgc tggacgttga
     4201 tcccaacttt tttcaattct tcggatttcg tttaaaagaa gggcgggcta aaacgtgctt
     4261 gcagtctttc gaccaggtgg tgcttacaga aaaacttgct caaaaatatt tcggcaaaga
     4321 agatccggtt gggaaaacca tcaacatcga caatacaccg ttcgcagtaa cgggtgtagc
     4381 agaaaatcct cctgtcaatt caaatataca gtttgatgct cttgtgtctt ccgcgttcct
     4441 gaagaagaga atgaaagaca attacaattt cgacatcgac agtatgtggg tgggcggctg
     4501 gccggatact tatgtcgaag tatctgatcc ggccaagtgg aaagaaactg aaaaacaaat
     4561 aaaccaggtt gcttttaagt ttgaagaaaa ggattggaaa gaaaataaaa tgtcttatca
     4621 atattttcta cagccgattc gcgatattca tctcaaatct cacctgcgct acgattcggc
     4681 aaacaacggc agtcttgctc ttgtaaatat tttctcgatc atcggtatca ttgttttatt
     4741 gctggcctgt atcaattata tcaatctcac aacagcaggc gctattaaac gggcaaagga
     4801 aacttctgta aggaaagtga tcggcgctac aaagccacag ctcatcaggc aattcttttt
     4861 tgaaactttc attatctgca cattcgcagt ttgtttaggc gttgtgattt gtaagatcgt
     4921 gctgccccag ttttcggcat ggataggaga gagctacgat tttccgctga acctcacaaa
     4981 tgttttgatc atttcaggct ttgtcatttt tatttctgct gtttccggta tatatcctgc
     5041 aagcatttta tcgtctttta atcccgcggt cgcattaaaa ggaaatttct ctcaaagtaa
     5101 aagaggtaat gtgatcagga agacattggt ggtatttcag tttacaatca ctatagcgct
     5161 cgtagcatct gtatttatta tcacgcagca aatgaattat gttcggaaca agtcgcttgg
     5221 ttttaatggc agtgctgtta tcgaggttaa gtttaatgcg gatgaaaatg tagttcaaca
     5281 ctacagttct attcgcagtg aattattgaa gagtccgtat gttttgaatg taagtaagca
     5341 tggccaaaac gtagtgggcg gacttggaaa cggatggacc acgacggtca atttaaaggg
     5401 tgaagaaatt tccacgagcc tttatggaat gtctgttgac gcagattatt ttaaaacgta
     5461 cgacatgaaa ctggccgcag gacgcttctt ttcaaaagat attccaactg atacaacaaa
     5521 ggcgttattg gttaatgaag cggctgtgag aacatttggc tggaaaaaac cggagaatgc
     5581 aattggcaaa ccgttcggca agggagaaga ccagcagtat gtaattggtg ttgtaaaaga
     5641 tttcaatttt gaaaatttgc ataaaccggt tgaagcattg agaattggat acgaaagaga
     5701 aggccggagg atctcgctga aagtaaatgc ggcccatatt gatgaagcta ttgctcaact
     5761 taaaacaaca tggagcaaac tggttccaac tgtgcctctg caatacgatt ttgttgatga
     5821 tgaaatcgaa gaacaatacg gcagcgagca aaaaatggaa ggcatttttt atgcattttc
     5881 cgggctttca cttttgatcg cgtgcctggg gctttttgga ctgtcgactt ttgtggtgga
     5941 acgtaaaata aaagagatcg gtataagaaa agtattgggt gcaagtgtgt cggggattgt
     6001 cggattgctt tctcaagatt ttttaaagct cgtgttgatc tccatattga tcgcaacgcc
     6061 cttggcgtgg tatttcatga ataactggtt gcaggatttt gcatatcgga tcgatattag
     6121 ctggtgggta ttcgcagtag cgggtttgat cgccgttttt atcgcgcttg ttactgtgag
     6181 cattaaatcg ataaaagcag cggtggcgaa cccggtgaag agtttgcgaa cggaatgagt
     6241 gaaaatgagc aatgagtaat gagttcgtaa atcgtaattc gtaaatcggc gatctgcaat
     6301 cgccaatctg caatcgcaaa tcgtaaattc caacgctcct ccaatgttca agaactatct
     6361 caaggtcgct ttgcgcagcc tttcaaaacg aaagggctac agcgtcatta acatactcgg
     6421 ccttgctatt ggcatggccg tgtgcctgct cattgtgttg tttatcgaaa gcgaattaag
     6481 ttatgatgac tggcaattga agggcgacaa tatttatcgt gtagttcttg aacgccgcta
     6541 tcccggtcgt tcaacttcgt attccactat tccgctatcg atcggacctg ccattcaaaa
     6601 agaatacccc gaggtcgttg aatgtacgcg tctctttgat tttggcggca acggaaattt
     6661 tttcctgcgg ataggagaga agatttttga agagagcagg gtgattgctg ccgattcgaa
     6721 tttctttcgg gtgttcacgg gcaggttgat agagggagat tcatccacgg cacttgtaaa
     6781 acccaactct gttgtgctga atgagaccac cgcaaaaaaa tattatggtt ccgcaggcgc
     6841 cgcaataaac aaaacttttc taacggatga tggcaatggg caaacaagaa cgtacatgat
     6901 aaccggcgtg tgccgcgatt ggcccgataa ctcgcatttc ctttttgatc tcgtcatttc
     6961 aacgtccagt tttgagtttc ttaaacagcc gaattatacg ggcttttctg cctataccta
     7021 tctcctgtta aatccacacg catctcccca ggcgctcgaa aaaaaatttc cggagatctt
     7081 aaaaaaatat gttgccggcg aagtaggcag aagttttggc gagacgtggg agcaattcca
     7141 ggcggagggg aatggttatc attattattt gcaaccgcta aaacaaatac atctcatctc
     7201 gcatctggaa gcggagttaa ggcccaatgg caacataacg acggtatata ttttcgccgt
     7261 gatagctgta tttattttat tgcttgcgtg catcaatttc attaatcttt ccactgcgcg
     7321 atccgtggaa agggcgcggg aagttggcat ccgaaaaaca ttcggctcaa acaggcgatc
     7381 gcttgtatgg cagtttttat tagagtcgat ggtcataagc ctggcaagta tgctgatagc
     7441 ttttggattg atcgcgttgc tccttccatt gttcaaccag gttgcaggaa aacaactctc
     7501 acttctttcg tttttaacac cgggcaagct ggcgctgctt gtggcgtttg caataacggt
     7561 tggattgatt gccggtttgt accccgcatt cgtgctatcg tctttcaaac cgaccactgt
     7621 actcaaagga aaatttaaat caaacacatt cggacttgcc ttacgaaacg gccttgttgt
     7681 tatccagttt tcaatatcgg taatactgat cgttgccacg atcgtcgtga ataaacaact
     7741 gcggtatatg atgagtgggg cggtcggttt caataaggac cacgtgatct ctattgaacg
     7801 gaccgatctg ctggaagacc aaacaaagtc ttttgaaaat gagcttgcaa aaattccggg
     7861 tgttgaaacg gtcagcggcg gtacggccct gccgggacag cagaactttt ttggagttcc
     7921 ttaccaacag gtgggttcga aggaatcaat gacagcaagg gggattgtag tagacgatca
     7981 atatgcaaaa ttgttgggtc ttcaaatgaa agaaggccgg ttcttttcaa aagatttttc
     8041 aaccgattca ttggcggttg ttttgaatga aaaagcggtt gcagattttg gtcttaaaaa
     8101 accaattggc gcccggctca cttcactcga tccccagttc aacgcgccag atggtacgcc
     8161 ttatgtgtac acggtggtgg gtgtgataaa agattttcat tttcaatcat tgcacgaaaa
     8221 gatctctccg ctgatcatta acaacaatag caagtttggc ggtcgttcac catttgtggc
     8281 cctgcgcgtt aacacaaaca attttgatca gacgctgact gctatacaaa acacgtggaa
     8341 aaaatttgtg ccggaacgtc catttcatta tagtttcctc gaccaaacat tggccgccca
     8401 atatgatgca gaacaaacca ctcaaaaagt gtttacgatc ttttctgtgc ttgcgatctt
     8461 tatcgcctcg atgggattac tcgggcttgc agcgtatact acgcaactgc gaaacaggga
     8521 aataagtatt cggaaagtat tgggcgcgag cgttgggaac attgttacga tgttgtcaac
     8581 tgattttctg aaactcgttc tcattgcggc gctgatcgcc tttccggtct cctggctttt
     8641 cgtgaacaaa tggctggaaa atttcgcgta tcgtataaac atcagcgcgt ggatattttt
     8701 aattgcaggc ctcgcggcgg tagtcgttgc tttgctaacg ataagtttcc aggcgatcaa
     8761 ggcggcggtg acaaacccgg tgacaaattt gagggcggag taatgagtga tgaatggaac
     8821 gtgatacgtg agtcttcgat ggaagctcca ggccaggttc aattaataaa tgtaatgttc
     8881 aataatcaat tttcaatgct caatattcaa tgcgcaatgc gcaatgctca acacaggctc
     8941 aaaccttcct tcatgttttg ataagtctcc taataaccta ataaaccaat aaaccagtta
     9001 acgaacctca aactttaaac ttcaaactat tcacctattt ttatttgatg aagcactttt
     9061 tattgttgct ctcgctcatt cccgcatttg cacaaacaca aactatcgat tcggctattg
     9121 caaagaatgt aagagaaata ataccaaagg ttgttgaatg gcgccggcat tttcatcaga
     9181 acccggagtt gtcaacccgt gaatataaaa cgggcgcgtt cgttgccgat tatcttaagt
     9241 cgtta
//
LOCUS       DASQJI010000689         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1479673,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000689 DASQJI010000000
VERSION     DASQJI010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479673"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VEV83_18740"
     CDS             complement(<1..1055)
                     /locus_tag="VEV83_18740"
                     /inference="COORDINATES: protein motif:HMM:NF045576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BT_3928 family protein"
                     /protein_id="HYK47224.1"
                     /translation="MKAYKKNILLVVRWIVGLLFIFSGLIKANDPLGLSYKMQEFFEA
                     WNWYALNDLTLPVSLIMNVFEVLAGVAVIIGWRMRLFSWLLLLLILFFSFLTGYAVLS
                     GKIKTCGCFGDCLPLSAEQSFTKDLILLMLIILLFINRSRIISSVRPFTAVVALSLCV
                     VLVSGLQAYVLRHLPLLDCLPYKKGNNILKEMQPPPNAVPDSVVMIFKYKKDGQIKEY
                     TMENLPADLDSTYEFIDRHDKVVRKGNATPPITDFSLFSLNGTDTTEAILNSNTAYVI
                     LFAKDFNTYPKWNNADFKSLQEELRKRRVPFYIVTADKQNGETLFGNDPEVKVLLCDG
                     TVIKTAARVNPTYFLMKG"
     gene            complement(1055..1606)
                     /locus_tag="VEV83_18745"
     CDS             complement(1055..1606)
                     /locus_tag="VEV83_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1599 domain-containing protein"
                     /protein_id="HYK47225.1"
                     /translation="MTTTENQFDKVIHRCKDVFIKKTRDYGTAWRVLRTISVVDQIFI
                     KALRIRNIQNIENRKVDDDVSSEFAGIVNYALIGLVQLKLNNPMVEELSLDKASFLFD
                     DAVSIVRETMLNKNHDYGEAWREMSQESFVDLILMKLMRIRQILSNDGRTLVSEGIDA
                     NYIDIANYAVFALILIEEGKHKA"
     gene            1723..>2291
                     /gene="folP"
                     /locus_tag="VEV83_18750"
     CDS             1723..>2291
                     /gene="folP"
                     /locus_tag="VEV83_18750"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HYK47226.1"
                     /translation="MFTLNCKGRLLTIDQPLVMGIINVTPDSFYMGSQKQSVAEAVEL
                     AEKMLHDGAAILDIGGQSTRPGSERLSANEELERVIPVIESIQKKFPSAFISVDTYSA
                     AVAECAVNAGASIVNDVSGGTMDEQMLETVAKFRVPYICMHMKGTPETMQKDPTYEDV
                     TREVLDFFIAQTEKCRQCGIHDIIVDPGFG"
BASE COUNT          630 a          514 c          523 g          624 t
ORIGIN      
        1 cccttcatca gaaaatacgt aggattaaca cgtgccgctg ttttgatcac agttccgtca
       61 cacagcagaa ccttcacctc cggatcgttt ccaaataacg tttcgccgtt ttgtttatcg
      121 gctgttacaa tataaaacgg aactcttctt tttctcaact cctcctgtaa ggatttgaaa
      181 tcggcgttgt tccattttgg atacgtgttg aaatcttttg caaagaggat cacgtaagct
      241 gtgttagagt ttaggatcgc ctcagtggta tcggttccat tgagagaaaa aagcgagaag
      301 tcggtgatag ggggcgttgc attgcccttt cttacgactt tatcgtgccg gtcaataaac
      361 tcgtaagttg aatcgaggtc tgccggcagg ttttccatcg tatattcttt gatctgcccg
      421 tcctttttgt atttaaagat cataactaca ctgtcgggaa cagcgttggg tggtggttgc
      481 atttctttca aaatgttatt cccttttttg taaggcaggc aatcgagcag gggtaaatgc
      541 ctcagaacat acgcctgcag tcccgacaca agcacaacgc acaacgataa agccacaacc
      601 gccgtgaacg gcctgaccga agaaatgatg cggctcctgt ttataaaaag caggatgatc
      661 agcatgagca gaataagatc ttttgtaaac gattgttcgg cagaaagagg cagacaatca
      721 ccaaagcagc cgcaggtttt tattttgccg gagagcaccg catacccggt gagaaaactg
      781 aaaaaaagaa taagcaataa taacagccaa ctgaataatc gcattctcca gccgatgata
      841 actgcaacgc cggcaagcac ttcaaacacg ttcatgatca gcgaaactgg aagggtcaga
      901 tcattaagtg cataccagtt ccaggcttca aagaattcct gcatcttgta gctcaatccc
      961 agtggatcgt tggctttgat caggccactg aagatgaaca gtaatccaac gatccaacga
     1021 acaaccagga gaatattctt cttgtatgct ttcattatgc tttgtgtttg ccttcttcaa
     1081 ttagtattag tgcgaagact gcatagttcg caatgtcaat ataatttgca tcgatgcctt
     1141 cgcttaccag cgtgcgcccg tcgttgctta atatttgccg gatccgcatg agcttcatca
     1201 ggatcaggtc gacaaaactt tcctggctca tttcgcgcca tgcttctcca taatcgtgat
     1261 tcttatttag catcgtttcg cgcactatcg aaactgcatc gtcgaagaga aaagatgctt
     1321 tatccagcga aagttcctca accattgggt tgttgagctt caattgaacg aggccaataa
     1381 gcgcgtaatt gacaatgccg gcgaattcgc tgctcacatc atcatccact ttccggtttt
     1441 caatgttttg tatgttgcgt attcgaagtg ctttaatgaa tatttggtct actacggaga
     1501 tcgttctcaa cacgcgccat gctgtgccgt agtcccgggt cttctttata aatacatcct
     1561 tgcagcgatg tattacttta tcaaactgat tctctgttgt agtcatttgg taaactgagc
     1621 gatgattttg ggattgcgaa gcgctcggag cacgcagctt ccagcttaac gcttgcttct
     1681 ttcctacatt tgtgcttcgc caaaagtaaa ggaaagacaa gaatgtttac actcaactgc
     1741 aaaggaagat tacttacgat agatcagcca ctggtgatgg ggatcattaa cgttacgccc
     1801 gattcgtttt atatgggcag tcaaaaacaa tccgtcgctg aagcggtaga actggcagaa
     1861 aaaatgttac atgacggagc ggctatcctt gatatcggcg gacaaagcac acggcctggc
     1921 agtgagcgcc tttcagcgaa cgaagagctc gaaagggtga tacccgtaat tgagtcaatt
     1981 caaaaaaaat ttccaagcgc tttcatttcg gttgacacat actcggcagc ggttgctgaa
     2041 tgtgcagtta acgccggcgc cagcatagta aatgatgtaa gcggtggaac aatggatgaa
     2101 cagatgctgg aaacggtcgc taaatttcgg gtgccctata tctgcatgca tatgaaaggt
     2161 acgcccgaaa caatgcagaa ggacccaaca tacgaggatg tgacgcgcga ggtgcttgat
     2221 ttcttcatcg cacaaacgga aaaatgcagg caatgcggta ttcatgacat cattgttgac
     2281 ccggggtttg g
//
LOCUS       DASQJI010000690         2465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1939212,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000690 DASQJI010000000
VERSION     DASQJI010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939212"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VEV83_18755"
     CDS             <1..735
                     /locus_tag="VEV83_18755"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HYK47227.1"
                     /translation="MRIHIIQHLAHEHGASIIDWAKERHHNLSFTYTFNKGHAYPSSD
                     EFDMVIILGGTMGAYEEDKYTWLRAEKHFIKQAIEAGKLILGICLGSQILADVLGSKV
                     YPHDKKEIGFFPIYKTADGEMEKSLAEIPATWTVFHWHGDTFDLPPGASHLFFSDGCK
                     NQGFRKDKCFGFQFHGEANAELLQAMIANERSELLKDDYVQSEDEILNFKSPDENLNY
                     FNAFLDHMMNEVFETHSKSGSFQFYQ"
     gene            complement(773..2122)
                     /locus_tag="VEV83_18760"
     CDS             complement(773..2122)
                     /locus_tag="VEV83_18760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47228.1"
                     /translation="MDTNTDNLKRLIDLLKKMSFWERLFSWRKIKLLLVDAAADLQKF
                     ISGTDNWKEKYSELRNDNERLHSELSISKVNAAQQAREVEENRQAANGYNQKITELSA
                     IISATEQIIENRKRNYYDLEKEHLNLKKDLQFAQQQIEELKRENTQFATDETNRKLEH
                     EKKLATLANIQQEVKSSREKEIEDRHMGELQRLEKLKDTWSNHQQTVKQVIKSICSRH
                     TIDYVEKVPFRGDPDNALNICNEYIIFDAKSPQGEDLGNFPKYLKAQAENARKYASIE
                     DVKKWIFMVVPSNALDCIQTYVYHLADYEVFVISVDALEPVILSLKRIEDYDFAEQLS
                     PEDRENICRIVGKFAHLTKRRIQIDTFFIKQFMELAYKAESDLPPDFLERVVEFEKAE
                     KLNPPSERRKKHIDLKELEKDTTRLRSETIAKGISIVESVISTALNELPLYSDEASD"
BASE COUNT          625 a          555 c          511 g          774 t
ORIGIN      
        1 atgagaattc acatcattca gcatcttgct catgagcacg gcgccagcat tatcgattgg
       61 gccaaggagc gtcatcataa tttgtcgttc acgtacacat ttaataaagg gcatgcatat
      121 ccttcatcgg acgagtttga catggttatc attttgggcg gaacaatggg agcatatgaa
      181 gaagacaaat acacatggct tcgcgcagaa aaacatttta tcaagcaggc aattgaagcg
      241 gggaagttga tccttggcat ctgcttaggt tcgcaaattc ttgcggacgt attgggcagt
      301 aaagtgtatc cgcatgataa aaaagagatc ggcttcttcc caatttacaa aacggcagac
      361 ggcgaaatgg aaaaatcgct cgcggagatt ccggccacgt ggacggtttt ccattggcac
      421 ggagacacat ttgatcttcc gcccggcgcc tcccacctct ttttttcaga cggatgcaaa
      481 aaccagggat tcagaaaaga caagtgtttt ggtttccagt ttcatgggga agcaaatgct
      541 gaacttttgc aggctatgat cgctaatgaa agaagtgaac ttttgaaaga cgattatgtg
      601 caatccgaag atgaaattct caatttcaaa tcacctgatg aaaacctgaa ttatttcaat
      661 gcgtttttgg atcacatgat gaatgaggtt ttcgaaaccc acagcaaatc gggtagtttc
      721 caattttacc agtgatgaac aattgcggct tttgagatgc gaaaaacatt tgctaatcgg
      781 aagcttcatc cgaatacaac ggcagttcat taagagctgt tgagatcacg ctttcgacga
      841 tcgatattcc cttcgcgata gtctcgctcc tcaatctggt cgtatctttc tccaactctt
      901 ttaggtcgat atgtttcttc cttctctccg aagggggatt gagtttctca gctttttcga
      961 attcaacaac acgttctaag aaatcgggag gcaagtcgct ttcggccttg tatgccagtt
     1021 ccataaattg cttaatgaag aaggtgtcaa tttgaattct gcgtttggtt agatgtgcaa
     1081 atttcccaac gatcctgcaa atattttcac ggtcttcagg gctgagttgc tcggcaaaat
     1141 cataatcctc tattctttta agactgagaa tcaccggctc cagagcatca accgagatca
     1201 caaaaacttc gtagtctgcc aggtggtaca catacgtttg aatacaatcc aaagcattgg
     1261 acggaacaac cataaagatc catttcttta cgtcttcgat cgatgcatat ttccttgcgt
     1321 tttctgcctg ggcttttaaa tattttggaa aattaccaag gtcttctccc tgcggacttt
     1381 tagcgtcgaa aatgatatac tcgttgcaga tattgagggc gttatcagga tcacccctga
     1441 aaggtacttt ctctacatag tcgatcgtgt gcctgctgca gatggattta ataacctgct
     1501 ttacggtctg ctgatgattg ctccatgtat cctttaattt ttcaagccgc tgcagctcac
     1561 ccatgtggcg gtcttcaatt tccttttccc ttgatgattt aacttcctgt tgaatgtttg
     1621 caagtgtggc taactttttt tcatgctcaa gtttccggtt cgtttcatca gtcgcaaact
     1681 gtgtattctc tctctttaat tcttcaattt gttgctgggc gaactgcaga tccttcttaa
     1741 ggtttaaatg ttctttttca agatcatagt agtttctttt ccggttctca atgatctgtt
     1801 cagtagctga aataatggcg ctgagttcgg tgattttttg attgtaccca ttagcggcct
     1861 gcctgttttc ctcaacctcc ctggcttgct gtgcagcatt cactttcgag atcgacaatt
     1921 ctgagtgtaa acgttcattg tcgttcctta attcgctgta tttttctttc cagttgtctg
     1981 tgccgctgat gaatttttga agatcagccg cagcatctac gagcagcagt tttattttcc
     2041 gccaggaaaa tagacgttcc caaaaactca tctttttaag cagatcaatt agtcgtttca
     2101 ggttgtctgt gtttgtgtcc ataaatcgtt atttaagcgt aattattaat gtgggcttcg
     2161 ctcgcaaact catccgtcat gccggcccac cgagaatctc agacgaatac attaaaagag
     2221 attttctcgt gccgtcgaca tcaaggcggc ggacatttat tttttgttgt aaggaaatca
     2281 ccttcagatc atcttcccac acaaccacgt tcagatcgaa cgtccctcac gacacctctc
     2341 ctgccgtttg ccgcatcgac acaaccttcg cgcgggtcgt tgctgcaact tgcttgagat
     2401 agttatacag ttctaccatt gcgcgcgtat ccatcttgca atactcaagc aggttttcac
     2461 gaatc
//
LOCUS       DASQJI010000691         4949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_251231,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000691 DASQJI010000000
VERSION     DASQJI010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251231"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VEV83_18765"
     CDS             complement(<1..215)
                     /locus_tag="VEV83_18765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47229.1"
                     /translation="MTQVSRRHFIRNAGGAGIALWLGISAKGTPGKTFNIGEAKNFTP
                     YILVEPGGAITIFNTKPEMGQGTFQSIP"
     gene            complement(460..1710)
                     /locus_tag="VEV83_18770"
     CDS             complement(460..1710)
                     /locus_tag="VEV83_18770"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK47230.1"
                     /translation="MISRRILIALCTVVAVFNTSAQTNKSLERLRFIADSILQNQVDG
                     NFIPGAVIEIKKDDRVILKKAFGYAQKYTYYNRLLDQPERTSTDYMYDLASLTKVVGT
                     TTSIMLLLDAGKLAVDDPVSKYIPGFNSPDKKNITIRNLLTHTSGLDDWYPLFYRAHN
                     TQETFQLIGELPLKYPVGAERHYSDLGFTVLGEIVEEISGVSLDSFMQEHIFIPLGME
                     HTTFNPLRSGKFTKIAATSHGNPYEARMVHDSSLGFMYKEIDPDSWNGWRKYTLKGEV
                     NDGNAWYAEGGVSGAAGLFSTVDDLQKFVDMLMRNGKVGDKQFISEKTLRMFLTKDQF
                     DNGLGWMMDPKNPVIKNGPAGTFGHTGFTGTSIAVVPEYHASIILLINRQNTGLLPSG
                     EYYNVSPIRSEIFEALLRYCQGKL"
     gene            2292..4013
                     /locus_tag="VEV83_18775"
     CDS             2292..4013
                     /locus_tag="VEV83_18775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK47231.1"
                     /translation="MKKQPGIIALLKPYRGMVLLLILFTLLSNGINLLIPKIISGGID
                     AYTAAHFSYNGLIRNFAIAVVAIFIFSYLQSILQTYASEKVARDLRKRLSDKISNQSY
                     AFIQQANPSKLLTNLTADVDSIKMFISQAIVSIISSLIIIIGASALLIGIDWKLALCV
                     IAIIPIIGVTFFVILKKVRAIFIQSRAVVDWLNKVINESILGAAIIRVVNSQQSESNK
                     FLEANTKARDFGFQILKLFAGLIPVITFTSNLAVLTILAMGGHFVIGGSMTLGNFAAF
                     NSYLSMLIFPILVIGFMSNVIAQATASYERIRSVIDAPDAPETGTITTPLKGSIELEN
                     VNVVYGQIPVLKDISFAVAAGSKTAIIGPTAAGKTQLLYLLTGLIKQSSGTIKYDDHT
                     IDEYKQDVFHQQVGFVFQDSIIFNMSVRENIAFNENVDEASMNKAIETAEIKQFIETL
                     PEKLDTIVSERGSSLSGGQKQRIMLARALALNPTILLLDDFTSRVDSNTERRILDNIA
                     KNYPQLTLVSVTQKIGTVENYDRIILLMESEIIASGKHEELLHTSPEYVQILESQKST
                     SNYELQS"
     gene            3997..>4949
                     /locus_tag="VEV83_18780"
     CDS             3997..>4949
                     /locus_tag="VEV83_18780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK47232.1"
                     /translation="MSYNLNEIPDKKQKLSTFSALKSLLQLIAHEKSNILVATLFILL
                     NSIINLGGPLIIGYTIDHYVQTKQYHGVLVFSGILLGMYSVGLFASYLQTKLIGSVSQ
                     RMLFTLRNTIFNKLQQLPVAFFHANKAGDLISRVNNDTDKINTFFSQSLMQFIGSIVT
                     MTGAGIFLLTINIKLGLAALVPGVAIFIFTKLVSPLVKKKNAVNLKSVGGMSAEIQES
                     LHNFKVIIAFNRRDYFRQRFQNANQHNYNSAIGAGLANNIFLPVYSLFSGFAQLIVLT
                     FGIYLISHGEFSIGLLVSYLAYVTYFYNPLRQLAALFASFQV"
BASE COUNT         1401 a         1087 c         1057 g         1404 t
ORIGIN      
        1 ggaatcgatt ggaatgttcc ctggcccatt tcgggttttg tgttgaagat cgtaatggct
       61 ccgcccggct caacgagtat gtacggcgta aaattttttg cctcgccgat attgaaagtt
      121 ttgccgggag ttcccttagc agagatgccg agccacaaag cgatgcctgc tcctcccgca
      181 ttcctgatga agtggcgcct cgaaacttgt gtcattgctc ttcgaaggta ttaaaaattg
      241 cagccgtgga aaacaaaaag ggcagcaaag acttgcgaga attgttgtgg catcatctgc
      301 tggaacgaac gatgcgctta aacgttaggt atcttttgaa aaatgaacac gcaatttaat
      361 aacgcatcgt cctctacgag agacgatgct tgacgaagtg aatacgattc aatacatatt
      421 ggtaaggcga ccaacattgg ccgtagtagc aaatagcgat tacagttttc cctggcagta
      481 tcgcaacagc gcctcgaata tttcgctgcg aattggacta acgttataat attcgccgct
      541 gggcaataac cccgtgtttt gacggttgat caataatatg atggacgcat gatactctgg
      601 gaccactgca atgcttgttc cggtaaaccc tgtatgtcca aatgttccgg ccggcccatt
      661 tttaataaca ggattcttcg ggtccatcat ccagccgagg ccattatcga attgatcctt
      721 tgtcaaaaac atgcgcagcg ttttttccga aatgaattgt ttgtcgccaa cttttccgtt
      781 acgcattagc atatcaacaa acttttgcag atcgtcaact gttgaaaaca aacccgcggc
      841 cccggagaca ccgccttcag cataccatgc atttccatca ttcacttcgc cttttaaagt
      901 gtatttgcgc caaccgttcc aactgtcggg atcaatttct ttgtacataa accccagtga
      961 tgaatcgtgc accattcttg cttcataagg attaccgtga gaggtagcag cgatcttcgt
     1021 aaactttcct gatcgaagtg gattgaaagt tgtgtgctcc atgcccaggg gaataaaaat
     1081 gtgttcctgc ataaacgagt ctaacgagac gccggaaatt tcttcgacga tctcgcctaa
     1141 tactgtaaat ccgagatcgc tgtaatgcct ttctgctccc accgggtatt tcaacggtaa
     1201 ttcaccgatc agttgaaacg tttcttgcgt attgtgtgca cgataaaaca gcgggtacca
     1261 atcatccaaa cctgaagtat gtgttaacag gttgcggatg gtaatgtttt tcttatcagg
     1321 actattaaaa ccgggaatgt atttgctaac cggatcatct acagctaact tacctgcgtc
     1381 caggagcaac atgatcgaag ttgttgtgcc caccactttt gtgagcgacg caagatcata
     1441 catatagtca gtgctcgttc tttccggctg gtcgagcaag cgattgtagt acgtgtattt
     1501 ttgcgcgtaa ccaaatgctt ttttcaaaat cacccggtca tcctttttta tttcgatcac
     1561 tgcaccggga ataaagttgc cgtcaacctg gttttgcaag atgctgtcag caataaatcg
     1621 caatcgttct aagctcttgt tcgtctgggc agacgtgtta aacacagcaa ctaccgtaca
     1681 caacgcaatc aaaattcttc gggagatcat ttattagatt tttttactcg tcttagcaat
     1741 gttaagatta attgcattca atataaaaat cgatgatatg agctgaaaga ttcgtgcagc
     1801 agacggcgga ctaatgttca gttcaaatga acttttgaac aattctaata aggtaataag
     1861 gttggtatcg tagacgggta catatgctat taaggtaata aggttttttc tcatcatagt
     1921 ccacagtttc aaaaacaggc gaattgcaga aagaaaattt agccttctgt tttctattta
     1981 gttgcgtgaa agaattcgag aacagcaagt ccaactatta ccttagtaga tgaacaaatc
     2041 cgcttatgaa cagacttact atcttattca ggcatttagc gaggcgctat ctaacgccat
     2101 gtgcgaatta gaaattataa tgaaccggac aagaacagtc gaaacaataa aatccactca
     2161 aaataataca gagaaaaatt tctaccgata aaataccgcc atttatcgcc acgatctgat
     2221 tttttacctt attcatttgt tttagtgttg cattcggccg agcttagcgc cccaattgaa
     2281 atcaaaggct gatgaagaaa caacccggca ttatagcttt gttgaagcct tacagaggca
     2341 tggtgctgtt actcatcttg tttacactgc tcagcaacgg cattaaccta cttattccca
     2401 agatcatttc aggcggaatt gatgcatata cagccgctca tttcagttac aatggactca
     2461 taagaaattt cgcaattgcg gttgttgcca tttttatttt tagctacctg caaagtatac
     2521 tgcaaacata cgcatctgaa aaagtggcga gggacttgcg gaagcggctt tcagataaga
     2581 tctctaacca gagctatgct tttattcaac aggcaaatcc gtcgaagctg ttaaccaatc
     2641 ttacggctga tgttgactcg atcaagatgt tcatctcgca ggcaatcgta tcgatcattt
     2701 catcactgat cattattatt ggagcaagcg cccttctgat cggcattgac tggaaactcg
     2761 cattgtgcgt gattgccatt atcccgatca tcggtgtgac tttttttgtg atactgaaaa
     2821 aagtacgcgc gattttcatt caaagccgcg cggttgttga ctggttgaat aaagttatca
     2881 atgaaagcat tttaggcgct gcgatcattc gggtggtaaa ctcacaacaa tcagaatcaa
     2941 acaaattcct ggaagcaaat actaaagcac gggattttgg tttccagata ctgaagcttt
     3001 ttgcaggatt gatccccgtt atcacattca cttccaatct tgcagtgctg acgatactgg
     3061 cgatgggtgg ccacttcgtg atcggcggta gcatgacctt agggaacttt gccgcgttca
     3121 atagctacct gtcgatgttg atcttcccga tccttgtgat cggatttatg agcaatgtga
     3181 tcgcgcaggc gacagcttca tatgagcgca tccgcagtgt tatcgacgcc ccagacgccc
     3241 cagaaacagg aaccatcaca acaccgttga aaggatctat cgaactggaa aatgtaaatg
     3301 ttgtatacgg acaaataccc gttttaaaag acatttcgtt cgctgttgcc gcaggttcca
     3361 aaactgccat aatcggtccg acggcggccg gcaagaccca gttgctttac ctgctcacag
     3421 gattaataaa acaatcatcg ggcactataa aatatgatga ccatacgatt gatgagtata
     3481 aacaggacgt gtttcatcaa caggttggtt ttgttttcca ggacagcatc atttttaaca
     3541 tgagtgttcg ggaaaacatt gcgttcaacg aaaacgttga tgaggcatct atgaataaag
     3601 ccatcgaaac tgcggagata aaacagttta ttgaaacatt gcccgaaaag ctcgatacga
     3661 tcgtatctga acggggctca agcttatcag gcggccaaaa acaacgcatt atgctggcac
     3721 gtgcgttggc gttgaatcca acaattttgt tgttggacga tttcacatca agggtggata
     3781 gcaatacaga aagacgcatc ctcgacaaca ttgcaaaaaa ttatccccaa ttaaccctgg
     3841 tctcggtaac acaaaaaata ggaacggttg aaaactacga ccggatcatt ttattgatgg
     3901 agagcgagat cattgcttcg ggcaaacatg aggaactgct gcataccagc cctgaatatg
     3961 tgcagatatt ggagtcgcag aaaagtacga gcaactatga gttacaatct taacgaaata
     4021 cctgataaga agcagaagct ctcaactttt tcggcactga aaagtttgct tcaattgatt
     4081 gcccatgaaa agagcaatat tctagttgca acattattca tcctgctcaa ctcgatcatt
     4141 aacctgggcg gcccgttgat cattggttat acgattgacc attatgtaca gacaaaacaa
     4201 tatcacggcg tactggtatt ctcaggcata ttactcggaa tgtattcggt cggactattt
     4261 gcaagttacc tgcaaacgaa gcttatcggc agtgtcagcc agcgcatgtt gtttacgttg
     4321 cgcaacacta tattcaacaa gctccaacaa ttgccggttg cattttttca cgcgaacaag
     4381 gccggcgacc tgatctcacg ggtaaataac gatacagata agatcaacac ttttttctcc
     4441 caatctttaa tgcaattcat cggcagcatt gtgacgatga cgggtgcagg catctttttg
     4501 ttaaccataa acatcaaatt gggtttggcc gcattggttc cgggcgtggc aattttcatt
     4561 tttacaaagc tcgtctcgcc tttggtaaaa aagaagaatg ccgtcaattt gaaaagtgtc
     4621 ggcggcatga gcgccgagat acaggagagc ctgcataatt ttaaagtgat catcgcattc
     4681 aaccgccgtg attatttcag gcaaaggttt cagaacgcaa atcagcacaa ttacaatagt
     4741 gcgatcggcg cgggtctggc gaataatatc tttctcccgg tgtacagttt gttttcaggg
     4801 tttgcgcaac tgatcgtgtt gacatttggc atctatctta tttcgcatgg tgagttttcc
     4861 atcggtttgc tcgtaagtta tctcgcttac gttacttact tctacaatcc tttgcgtcaa
     4921 ctcgctgcat tatttgcaag cttccaggt
//
LOCUS       DASQJI010000692         7166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2708048,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000692 DASQJI010000000
VERSION     DASQJI010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7166
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2708048"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VEV83_18785"
     CDS             <1..370
                     /locus_tag="VEV83_18785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47233.1"
                     /translation="NSKQSDEPFTIENYYKVKWGYADEFITLWKTNHYPLLKKAIEHG
                     DILSVTAEKPKLHSGEDTRWDFKVTIVFKNAKLAFDPDLTTPYKKELYPDQDKLTKDE
                     QHRFELLIAHWDVMVDKIDL"
     gene            complement(976..1782)
                     /locus_tag="VEV83_18790"
     CDS             complement(976..1782)
                     /locus_tag="VEV83_18790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HYK47234.1"
                     /translation="MKKAHALSGTTLIFLALISFSSCKKSATENKVSVASSSNATTYT
                     LVWSDEFNGTSVNTADWNFETGGGGWGNNEKEYYQAANATVSNGNLVITAKKQRVKAN
                     AYTSARMTTQNKRQFTYGKMEARISVPMVQGLWPAFWMLGSNINTVSWPACGETDIME
                     HINTENLIYGTIHWDNNGHAQYGGNTTTTPGSFHIYSVEWDSAAIRWYVDGVKYVEAN
                     ILNNINGTEEFHRPFFMILNLAVGGNWPGQTIDDTKLPASMLVDYVRVYR"
     gene            1983..5387
                     /locus_tag="VEV83_18795"
     CDS             1983..5387
                     /locus_tag="VEV83_18795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HYK47235.1"
                     /translation="MKKLLVFIMPIVVACSFSCNKREGKPRVLVFTKNTYYYHESIPT
                     GVAAIMKLGQENGFDVDSTSNADVFNEDSLAKYAAVIFLNNADNKDALLNQYQEADFQ
                     RYIEAGGGYVGIHAASDAEYKWGWYVRLVGGTFNGHPEEHQVATLNVVDQDHPSTKEL
                     PKQWKFKEEWYNFRNLNKDVHVLITIDENTYKGGTNGPNHPISWYHDYDGGRAWFTAL
                     GHSNETYSDPNFLKHLLGGIQYAIGENKKLDYSQVKTDRVPNEDRFTKTVLVQAQFFE
                     PTEMTILPNLDILIAQRRGELLLYKNETKQLKQVGYLHVYWHANTPGVNAEEGFMGLQ
                     KDPNFKSNNWVYAYYSPIDSSVNRLSRFTFKSDSLDMSSEKVILEVHSQREICCHTGG
                     SIAFGGDGLLYLSTGDNSTPFNEPGVRYVNSGFAPLNDIPGHQQFDARRSAGNTNDLR
                     GKILRIKVNNDGSYSIPDGNLFPKGEAKTRPEIYVMGDRNPYRISVDQKNSYLYWGEV
                     GPDADADSLNTRGPRGYDEVNQARKAGFYGWPLFIGNNYPYHQYDYATGTSGPLFDPA
                     HPQNNSRNNTGITDLPPAQPAFIWYPYAESPDFPEVGTGSRNAMAGPVYYTDMFPKET
                     RLPDYYNGKLLIYDWMRGWIKAVTMLPNGDFDKMEPFFEHIKLSNCIDMEVGPDGRIY
                     LLEYGTGWFQKNPDAALARIDYTAGNMAPKIAAIRVDKTTGSLPFNGTAKVDAKDAEN
                     DKLTYIWNLGNGTTKETSTPELNFDYTTAGDYKLFVTVKDSHGDSANSDMVELYAGNE
                     TPVVNVQLTNANKSFYLPGRPIQYSVTVSDKNDTSKIDPANLFVSVDYVQGVSQSSTG
                     KAAQLESGAVGGKNIMMSLDCKSCHKENEKSIGPSFMQVAQKYAKDANAVSYLSQKII
                     KGGGGVWGEAAMAAHPNLPQSDAQQIVAWVLSLGNQAAIKKSLPQTGTITPPADAKPG
                     AALVVSASYTDKGGNNIKALTGRSTAILNSNSVTFKGTEKKKGFEVYNSPRGNFMVLP
                     KAEGWFALDSIDLTGVGSATLMAGWQIPPEYGFDFELRLDAPDGKSLGSGALNPPGKG
                     QQSAMVHVPLQAVTDGKYHTLYVLSKPKNAAEKATGGIAFVQFNAK"
     gene            complement(5407..5796)
                     /locus_tag="VEV83_18800"
     CDS             complement(5407..5796)
                     /locus_tag="VEV83_18800"
                     /inference="COORDINATES: protein motif:HMM:NF026420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transmembrane 220 family protein"
                     /protein_id="HYK47236.1"
                     /translation="MKIFNIVFCVIFILFAAVQYNDPDPYLWMPIYLYAAVLCWLAFK
                     NKFYPGAYLIGIMLYGLYALYKVFDQNGLIDWITSHHAENIAETMKAEKPWIEESREF
                     FGLVILIVVLLINYIYARRRTTQAGSH"
     gene            5922..6620
                     /locus_tag="VEV83_18805"
     CDS             5922..6620
                     /locus_tag="VEV83_18805"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK47237.1"
                     /translation="MRNLFLQETNFQIRYNACHERGWTDSYMLRFNGDQIGYASIKGN
                     ANVSERDTVFEFFITSSFRKLAPIAFLQLLRSSKAAFIECQTNDILLTSLLYQYGQNV
                     KSNVILFEENFTTDLKQNTALFRKRNDSDVLFKHHSEPVGDYVLETDGHIVATGGFLL
                     HYNMPFADLYMEVEERYRKKGFGSFLIQEIKRECYLAGRVPAARCSIDNLASKASLIK
                     AGFQNSRFYVARRR"
     gene            6672..>7166
                     /locus_tag="VEV83_18810"
     CDS             6672..>7166
                     /locus_tag="VEV83_18810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47238.1"
                     /translation="MHTISVRQPIMRRSFLLKRAYSLLSVCFTMIALWVPLQETLAQA
                     VHTLPIKGLNGPNGFALDKSGALYVANERGKQVLKIINDSIVEKVLECDSPCGLDFDN
                     DNNLYVINFFSGVVLRKNKSAVDTFASGLDQPSDIKWDGKENFYVSEYEKGTIKKINM
                     KGQLS"
BASE COUNT         2114 a         1531 c         1578 g         1943 t
ORIGIN      
        1 aaacagtaaa cagtcggacg aacctttcac tatagaaaat tattacaagg tgaaatgggg
       61 atatgctgat gaattcatca ctctatggaa aacaaatcat tatccgcttt tgaaaaaagc
      121 aatagaacat ggagacattc tcagtgttac cgcagaaaaa ccaaaattgc acagcggtga
      181 ggatacgcgt tgggatttta aagtgaccat cgttttcaaa aatgcaaagc ttgcttttga
      241 tcctgatctt accactcctt acaagaaaga attatatcct gaccaggaca aactcacaaa
      301 agatgagcag catcgatttg agctattaat cgcacattgg gatgtgatgg tagacaagat
      361 cgatctgtga gggggattgg aattgaggtt taggatttag gatttaggat ttagcattcc
      421 gatccattcc gtgtacgata ctcacgatga tttgatcctg tcacttcgaa ctcagcttac
      481 tcatcaccga tcattcatta ttcatttatc gttcaagagt ctattattta attcagttcc
      541 tcaaatttca acctattcga aattgacaac tcacaattca catcactagg tactgaatca
      601 ggatttaaac ttccgatcca attctgtgta cgcgatgtta acgatgatta agcatactct
      661 cggttcgcac tttgcccact catcactcat cattcattaa tcgttcaaga gcctattatt
      721 taatttagtc ccccaaattc tcaacaacta ttcaccattc acaattcaca attcacctca
      781 ccggtgcgga attaggattt aagattgcga tcgaattcgg tgtacgcgtt attcaccgtg
      841 acttatcatc cggctcgcac tgagcttact catcactgat cactcattat tcatttacgg
      901 gtgaacctct aattatttaa tttagttcgc caaatttcag atcaactatt caccattggc
      961 cattcacaat tcacctcacc ggtacaccct cacataatca acaagcatac tagccggtag
     1021 tttcgtatcg tcgatcgttt ggccaggcca attaccgcct actgctaaat ttaagatcat
     1081 gaaaaaaggc cggtgaaatt cttcggtccc attgatgttg ttgagaatat ttgcttccac
     1141 gtattttact ccatccacat accagcggat ggctgccgaa tcccattcaa ctgaatagat
     1201 atgaaatgaa ccgggcgtgg ttgtagtatt gccgccatac tgtgcgtgcc cgttgttatc
     1261 ccagtgtata gttccataaa tgagattttc tgtattgata tgctccatga tgtcggtctc
     1321 accacatgca ggccaactta ccgtatttat gttcgagccg agcatccaaa acgcgggcca
     1381 tagcccctgc accataggca ccgaaatgcg cgcttccatt ttcccatagg tgaattgcct
     1441 tttattttgg gtggtcattc gcgccgacgt ataggcattc gccttcacgc gttgtttttt
     1501 tgcagtgatg accaaatttc cattcgagac agtcgcgttc gcagcctggt aatattcttt
     1561 ttcattattt ccccatcctc cacccccggt ttcaaaattc cagtcagcag tgtttactga
     1621 cgtcccgttg aattcatccg accaaacaag cgtgtacgta gtcgcatttg aactactggc
     1681 tactgatact ttgttttcag tggccgattt tttacaggat gaaaaagaaa taagggctaa
     1741 aaagatcagg gtggttcccg acaaggcatg tgcttttttc atatgcaagg ttttaaattg
     1801 agcaaattgt aacccaattt aatccattta gttcaaacag gtgcgaagaa ttgttttagc
     1861 tataacgaag cggattattt cttaccattt aaaaaaatct cgtgtctata agttttcgta
     1921 ttcccgttta gaattacatt tatcagcacg tattttctca cacataaaat cagcaacctc
     1981 caatgaaaaa acttcttgtt tttatcatgc caattgttgt agcctgcagt ttctcatgta
     2041 acaaacgtga gggtaagcca agggttttgg tatttacaaa aaacacctac tactatcacg
     2101 agtctattcc cactggtgta gccgctatca tgaaactcgg acaggaaaat ggctttgacg
     2161 ttgacagcac gtcaaatgca gatgtgttca atgaagactc actcgcaaag tatgcggctg
     2221 ttatcttctt gaataatgct gataacaaag atgctttact caatcaatac caggaagcag
     2281 attttcagcg ctacatcgaa gcaggaggag gctatgttgg catacatgcg gcctcggatg
     2341 cagaatacaa atggggttgg tatgtaagac tcgtgggagg aacgttcaac ggtcatccgg
     2401 aagaacacca ggtcgccacg ctcaacgtgg tagaccagga ccatccgtcg actaaagaat
     2461 tgccgaagca atggaaattt aaagaggagt ggtataattt ccggaacctg aacaaagacg
     2521 tacatgtttt aataacgatc gatgaaaaca cgtataaagg cggaacgaac gggccgaatc
     2581 atcccatctc atggtatcat gactacgacg gaggaagggc atggtttacg gcattgggcc
     2641 atagtaacga aacgtacagc gatcccaact ttttaaaaca tcttttaggc ggcatccaat
     2701 atgcgatcgg tgagaataaa aaattagatt actcgcaggt gaaaactgat cgggtgccta
     2761 atgaagaccg gttcaccaag acggtccttg tgcaggcgca atttttcgag ccaactgaaa
     2821 tgacaattct tcccaacctc gatattctta ttgctcaacg acgcggtgaa ttactgttgt
     2881 ataaaaatga gacgaagcag ttaaagcagg ttgggtactt acatgtttac tggcatgcaa
     2941 acacacccgg tgttaatgcg gaggagggct tcatgggttt gcagaaagat ccaaacttca
     3001 aatctaataa ttgggtttat gcatattaca gccctatcga cagctctgtg aatcgcttgt
     3061 cgagatttac gtttaagagt gacagcctcg atatgtcttc ggaaaaagtt atccttgaag
     3121 tgcattcaca acgtgaaata tgttgccaca ccgggggctc aatcgcattc ggcggtgatg
     3181 gattactata tctctcaacc ggcgataact cgactccatt taatgaaccc ggtgttagat
     3241 atgtgaacag cgggtttgca ccgctgaacg acattcccgg tcatcaacaa tttgatgcgc
     3301 gcaggtcagc aggtaatacc aatgatctcc gcgggaaaat tttacgcatt aaagtaaaca
     3361 atgatggcag ctattcgatt ccggatggca acctttttcc aaaaggtgaa gccaagacga
     3421 gacctgagat ctatgtgatg ggcgatagaa atccgtatcg catttctgtc gatcaaaaaa
     3481 acagttacct ctattggggt gaagtgggtc cggatgccga cgctgatagt ttaaacaccc
     3541 gcggtccgcg tggctacgat gaagtgaacc aggcgcgcaa agcaggcttt tacggctggc
     3601 ctcttttcat tggaaataat tatccgtatc atcaatatga ttacgcaacc ggcacaagtg
     3661 gtcctttgtt tgatccggct catcctcaaa ataattcaag gaacaatacc ggcatcacag
     3721 atcttccacc cgcgcagcca gctttcattt ggtatcctta cgcggagtct cccgatttcc
     3781 ctgaagtcgg cacgggtagt agaaatgcaa tggcaggacc ggtttattac accgatatgt
     3841 ttcctaaaga aacgcggctg cctgactact acaacggcaa attgttgatc tacgactgga
     3901 tgcgcggctg gataaaagca gtgaccatgt tgccgaatgg tgactttgac aaaatggaac
     3961 cgttctttga acatatcaaa ctaagtaatt gcatcgacat ggaagttggc ccggacggaa
     4021 gaatatattt actggaatat ggaacaggat ggtttcagaa gaacccagat gcggcactgg
     4081 caagaattga ttacacggca ggtaacatgg ctccgaaaat tgcagccatc cgtgttgata
     4141 aaaccacggg ttcattgcct tttaatggca ctgccaaagt ggatgcaaag gacgctgaaa
     4201 atgataagct cacttatata tggaacctcg ggaatggaac aacgaaagaa acttcaacac
     4261 ccgaattaaa tttcgattac acaactgccg gagattataa gctttttgta accgtgaaag
     4321 attcgcatgg agattctgca aatagcgaca tggtagaact gtatgctgga aatgaaaccc
     4381 ccgttgtgaa cgttcagctc accaatgcaa acaaatcttt ctacctcccg ggcagaccga
     4441 tacaatattc agtaacggtt tcggataaaa acgatacttc gaaaattgat ccggctaatc
     4501 ttttcgtgtc tgtcgattat gtgcaaggcg ttagccaaag ttccaccggc aaggcggcac
     4561 aattagaatc aggtgctgtg ggcggaaaaa acattatgat gtcgctcgat tgcaagagct
     4621 gccataaaga gaatgaaaag tctattggtc cctctttcat gcaggtggca cagaaatacg
     4681 cgaaagatgc gaacgcagtg tcatacctca gccaaaagat cattaaggga ggcggaggtg
     4741 tttggggcga agccgcgatg gctgcgcatc caaacttgcc ccagagtgac gcgcagcaaa
     4801 tagttgcctg ggtgctttcg ttagggaacc aggccgcgat aaaaaaatcg ttgcctcaaa
     4861 ccgggaccat aacaccaccc gcggatgcga aacctggtgc agcgcttgtc gtttccgcaa
     4921 gttacactga caagggaggc aataatatta aagcgctcac cggccgaagc accgcgatat
     4981 tgaatagcaa ttcggtgacg tttaaaggca ctgaaaagaa aaagggtttc gaggtgtaca
     5041 attcaccgcg tggcaatttt atggtcttgc cgaaagcgga aggctggttt gctttggaca
     5101 gcatagatct aacaggcgtc ggttccgcaa ccctgatggc cggatggcaa attcccccgg
     5161 aatacggttt cgactttgaa ctaaggctcg atgcgcctga tggcaaatcg cttgggtcag
     5221 gagcgttgaa tcccccgggc aaaggacaac aatctgctat ggtacatgtt ccgttgcaag
     5281 ctgtaacaga cggcaaatac catacgttgt atgtgctctc aaaaccgaaa aatgccgcgg
     5341 aaaaggcgac cggcggcatt gcgtttgtgc agttcaatgc aaaataatta gtcgtggcga
     5401 gtccagttaa tgggagcctg cctgtgttgt tcttcgccta gcgtagatgt agttgatcag
     5461 cagcacaacg atcaaaataa cgaggccgaa aaattctctt gattcttcga tccagggttt
     5521 ttcggccttc atggtttcgg cgatattttc tgcgtggtgg ctagtgatcc aatctatcag
     5581 tccattttga tcaaatactt tatacaaagc atacaggcca tataacatga tgccaattaa
     5641 ataagcgccc ggataaaatt tgtttttgaa cgcgagccag caaagaacag cagcatacaa
     5701 atagatcggc atccacaggt aaggatccgg atcgttgtat tgcactgccg caaacagaat
     5761 aaaaatgacg caaaaaacga tgttgaatat tttcatgagc gcaggagcga aagtagcaaa
     5821 aacaaaaatc cgtttctggc gtttgattat caacttttgt ttgacacttc atcaatatgg
     5881 cacttgaagt aattaagacg gatctccggg aaatcctgca tttgagaaac ctttttttgc
     5941 aggaaaccaa ttttcaaatc aggtacaatg cttgtcatga gcgaggatgg accgacagtt
     6001 acatgcttcg gttcaatggt gatcagatcg gctatgcttc tatcaagggc aacgcaaatg
     6061 tttctgagag ggatactgtt tttgaatttt ttattacttc ttcatttaga aaactggcac
     6121 cgattgcttt tttgcaatta ctacgatctt caaaagcggc ttttatagaa tgccagacca
     6181 atgatatttt gctgacatct ttgttatatc aatatggaca aaatgtaaaa tcaaatgtga
     6241 tcttatttga agagaatttc acgactgatc taaagcaaaa cacagcgtta ttcaggaaac
     6301 gtaatgacag tgatgttctt ttcaaacatc attcagaacc tgttggcgac tatgttttag
     6361 aaacagatgg acacattgtg gcgaccggtg gatttcttct tcactacaat atgccgtttg
     6421 cagatctata tatggaggtt gaagaacgtt atcgcaaaaa gggatttgga agttttctca
     6481 tccaggagat aaaaagagaa tgttacctcg cgggcagagt tccggcggcc cgttgtagca
     6541 tcgataacct tgcttcaaaa gcaagcttga taaaggccgg ttttcaaaat agcaggtttt
     6601 atgttgctcg cagacgttaa ttcaaagtaa aacgatttta taagaacagc acccacggaa
     6661 gaagtcgatc tatgcataca atttctgttc gccaaccgat catgcgaaga tcgtttctgc
     6721 taaaacgagc ttattcttta ttaagcgtgt gtttcacaat gatcgctttg tgggtgcctt
     6781 tgcaagagac actggcgcaa gctgttcata cacttcccat caaaggtctg aacggtccaa
     6841 atggttttgc actcgacaaa agcggtgcgt tatatgttgc aaatgagcgc ggcaaacaag
     6901 tcctcaagat cataaatgac agtatcgttg aaaaggtgct tgaatgcgat tcaccatgcg
     6961 ggcttgattt tgataacgac aataatttgt acgtcatcaa ttttttctcg ggtgtcgtgc
     7021 ttagaaaaaa taagagcgcg gttgatacgt ttgccagcgg attggatcaa ccttcagata
     7081 taaaatggga tgggaaagaa aatttttatg tttcggaata tgaaaaagga actatcaaaa
     7141 agatcaacat gaaaggacag ttgagc
//
LOCUS       DASQJI010000693         2460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1631822,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000693 DASQJI010000000
VERSION     DASQJI010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1631822"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1094
                     /locus_tag="VEV83_18815"
     CDS             93..1094
                     /locus_tag="VEV83_18815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HYK47239.1"
                     /translation="MFIVHSYTLAVIFCIITMLCWGSWANTQKLASKTWRFELFYWDY
                     VIGILLFSLVAAHTLGSMGTEGRNTTDDLHQASTENVLSAFIGGIIFNAANILFSAAI
                     AIAGMAVAFPLAIGLALVLGVMVNYFAAQKGDPVFLFAGVACVAVAIIINAIAYKKKS
                     GSERKVSTKGIVLSLVAGLLMSFFYRFIAASMDLENFENPAPGKMTPYTAVFIFSVGI
                     FVSNFLFNTILMKKPFDGPAVTYKQYFKGRFATHMVGVLGGLIWGLGNSLNLIAAGKA
                     GPAISYGLGQGATLVAALWGVFIWKEFTNAPKGTSNLITAMFLFFIVGLGLIIYAGR"
BASE COUNT          613 a          550 c          572 g          725 t
ORIGIN      
        1 gtctgcgcca tacagaaatg aagtgatgca gaccagtatc cgatgaacag atttcacaat
       61 taacaatcga tcagtactca atcaattgac acatgttcat cgtacactca tacacccttg
      121 ccgtcatctt ctgcatcatc actatgcttt gttggggttc gtgggcaaac acgcaaaagc
      181 ttgcttcaaa aacgtggcga tttgaattgt tttattggga ctatgtcatc gggatcttgt
      241 tgttctcact tgtagcagcg cacacactgg gcagcatggg cacagaaggc aggaacacaa
      301 cggatgatct tcaccaggcg agcacggaaa atgttttgag cgcctttata ggaggaataa
      361 ttttcaatgc cgcgaatatt ttgttctctg ccgcaatcgc gatcgccggc atggccgtcg
      421 catttcctct tgcaattgga ttagcgctgg tactcggcgt catggtcaat tatttcgcag
      481 ctcaaaaagg cgatcctgtt ttcctgttcg caggtgtcgc gtgcgtggca gtggcgatca
      541 tcatcaatgc gatcgcttac aaaaagaaga gcggcagcga gcgaaaggtt tcgacaaagg
      601 gcattgttct ctccctcgtt gcaggattgc tgatgtcttt tttttatcgt tttatcgcag
      661 cgtctatgga ccttgaaaat ttcgaaaatc ccgcccccgg aaagatgacg ccttatacgg
      721 ctgtatttat tttttcggtt ggaattttcg tcagcaattt tttattcaat accattctca
      781 tgaaaaaacc ttttgatggt ccggctgtta catacaagca gtattttaaa ggaagatttg
      841 ccactcatat ggtcggtgtg ctgggcggtt tgatctgggg attgggtaat tctcttaatc
      901 ttatagccgc aggtaaggca ggtcctgcga tttcctatgg acttgggcag ggtgcaacgc
      961 tcgtcgccgc gctgtggggc gtgttcatct ggaaagagtt tacgaatgcg ccaaaaggca
     1021 cgagcaattt gatcaccgcg atgtttttgt tctttattgt tggattgggc ttgatcattt
     1081 atgcgggacg ataactgtct cgttgtatca cgcatttatt taatgacatg gctagccaca
     1141 ttcactcgtc aaaatccttt cgccaggcga cccttgaacc ggcctctctt ttccatcgat
     1201 gacttttata aaggaggctc cgatggagcc acaagaaacg tttcccggtt ttttataaac
     1261 aggtggctcc tctggagccg acagatgcga cacaaaaaaa ttttccgagc gaaataagtc
     1321 gctgcattta agggagcacg cgtgtgtcat ttcaaggaat gcttcttcag ctttgtcagt
     1381 aggcactgtt ttttttgttg ttggcggggc cggtcaattg ttctttgcac aacaattaaa
     1441 aaggaggctc ctctggagtc ggcacatgcg aaacaaagat ttcttgctgg cgaataaatc
     1501 aatgcattta agcaacagca aacgcctttt gtttcgatta aatgtttatt ctggctccgg
     1561 cgcgacggct ctgcttaaaa tttctttgag ttttcaaaca gatgttagcc tcgctccgtt
     1621 aggagcgcca tgtttatagt aagagttgga gtcacggtat gcctggctcc gttaggagcc
     1681 tcctgaactt tccgagtaga ccatgcattt attgaatgac atggctagcc acattcactc
     1741 atcaagactt tcgccaggcg accctgaacc ccgcatctct tttctatcga tgaattccat
     1801 aaaggaggct ccgatggagc cacgagaaac gtttcccgat tttttataaa caggtggctc
     1861 ctctgggagc cgacagctgt gacacaaaaa aagcttttca agcgaataag tcgctacatt
     1921 taaaccaaac gcctgtttcg ttaaagtaat gttcagcttg gtcggaaggc actgtttttc
     1981 ttttttgtgg tggaccggaa ggttcaaatt gcctttgcgg aacaattata aaggaggctc
     2041 cgatggagcc atgagaaacg cttcccggtt ttttataaac acgtggctcc tctggagcca
     2101 gcagatgcta cacaaaaaaa ttttccaagc gaaataagtc gctgcattta aggcagcacg
     2161 ggtgtgtcat ttcaaggaat gtttcttcag ctttgtcagc aggcactgtt tttctttttt
     2221 gttactggcg cgcggctggt caattgttct ttacacaaca attataaagg aggctccaat
     2281 ggagcctaga gaaacgcttc gcgattttca taaacaggcg gctcctctgg agccgacaga
     2341 tgctacacaa aaaaattttc caagcgaata actcactgcc ttaagccaaa cgcgtctttt
     2401 gtttgaagta atgtttcttc agtccggtca agaatgcacc gttttttttg tattaacctc
//
LOCUS       DASQJI010000694         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1323324,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000694 DASQJI010000000
VERSION     DASQJI010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323324"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VEV83_18820"
     CDS             <1..296
                     /locus_tag="VEV83_18820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HYK47240.1"
                     /translation="QMCSRVALIPGAAGGRLQIAALQKEKPDLLIVGELNEWETSEYV
                     RDLRYTGANTSLLVLGHIASEEPGLQWLVEWLKPQLPGINITHIPSRDVFSWE"
     gene            complement(297..1106)
                     /locus_tag="VEV83_18825"
     CDS             complement(297..1106)
                     /locus_tag="VEV83_18825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HYK47241.1"
                     /translation="MIHQILKDKPTKLFLGFTAFFVANALIAECIGTKIFSLEKLLGL
                     QPSSMTLFGQSGLSFNLTCGVLLWPLEFVMTDLVNEFYGPKAVRRISYTAVILISYAF
                     IMFYSSISIPPADFWITSNQTKGIDNMQTAFGGIFGQGMWIIFGSLTAFLVSQIVDVT
                     VFHRIKKVTGEKKVWLRATGSTLVSQLVDSYIVLTIAFKLGSNWSWPQVLAVGTMNYI
                     YKFGMAIILTPVIIIVERWIANYVGHKTATQMKRAAMGQIDDGFENIPTAG"
BASE COUNT          485 a          376 c          361 g          396 t
ORIGIN      
        1 atcaaatgtg cagccgggtc gcgcttatac cgggcgcggc gggcggacgt ttacaaatcg
       61 ctgcgctgca aaaagaaaag ccggatcttc ttattgttgg tgagctaaat gaatgggaaa
      121 ccagcgagta tgtccgcgac cttcgttata cgggagcaaa tacttctttg cttgtgctcg
      181 ggcatattgc cagtgaagag ccgggcttgc agtggttagt tgaatggctg aagccgcagc
      241 taccggggat aaacattacg cacatcccct caagggatgt ttttagctgg gagtgatcaa
      301 cccgccgttg gaatattttc aaagccgtcg tcaatctggc ccattgccgc tctcttcatc
      361 tgggtggcgg ttttatggcc cacataattc gcgatccatc gttccacaat tatgatcaca
      421 ggtgtaagaa tgatcgccat gccgaattta taaatgtagt tcatcgtccc aaccgcaagt
      481 acctgcggcc agctccagtt gctgccaagc ttgaacgcaa tggttagcac gatgtaacta
      541 tcgaccaatt gagaaacaag cgttgaaccg gttgcgcgca gccaaacctt tttttcaccg
      601 gtgactttct tgatccggtg gaacacagtt acgtcaacga tctggctcac caaaaaggca
      661 gtgagactgc cgaagatgat ccacatgcct tgtccgaaaa tgccaccgaa agctgtttgc
      721 atattgtcga ttcctttcgt ttgattactg gtgatccaga aatctgcagg cgggatactg
      781 atgctgctgt agaacatgat gaatgcgtag gagatcagaa ttactgcggt gtaactgatg
      841 cgacggactg ccttcggccc ataaaattca ttgaccaggt ctgtcatcac aaactcaagt
      901 ggccacaaca acacgccgca ggtgagatta aacgataagc cgctttgccc gaacaacgtc
      961 atgctcgacg gttgcagccc aagcaacttt tcaagcgaaa atatttttgt gcctatgcat
     1021 tcggctatca acgcattcgc tacaaagaaa gcggtgaagc caagaaaaag cttggttggt
     1081 ttgtctttaa gaatctgatg tatcatgaaa gaaagaaata aaaaatttgc aaaacaaagc
     1141 acgctacatt cgcgacaatg agccacaatg gaacagagag acccttaccc ctttttagta
     1201 ctacaacaaa agaaacgcag aggcaaatga gattgatcgc aggagagaac agccatccaa
     1261 gtatcgttgt aagttcgacg atgggttgtg gaattactgt atccgcgtga ctatatcgga
     1321 tcaccataca gagcgcaaaa aaaatattgc atataaacgc aaccttgtgt atgaacacta
     1381 gtctcttgaa cgtggtttgc acctgctcca tgcgataaat gtaataatga atgatgagta
     1441 atgagtgatg agacgaaatg ctgcaagatc tatcttaaat gcagtggcaa aaaatcacaa
     1501 gtaccaagaa ccaaaaagca aataaaattt taaattgcaa atgcaaaaaa ttcccaattc
     1561 ccaattccca attcccaatt cccaattccc aattcccaat tcccaattcc caattccc
//
LOCUS       DASQJI010000695         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1787249,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000695 DASQJI010000000
VERSION     DASQJI010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1787249"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /locus_tag="VEV83_18830"
     CDS             complement(<1..1010)
                     /locus_tag="VEV83_18830"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HYK47242.1"
                     /translation="MKKLTSTVTAMLAIGFCFGQTDAQKVDALLKKMTLEEKVGQMTQ
                     VTLAVVAKNGWGNQDGALDPAALKKAIEDYKVGSILNTTAHALDVNTWRNMMTQIQDE
                     TKNTRLKIPVIYGLDGIHGQTYTLNSTLFPQSIALAATRDTTLARKAAKITAMELRAS
                     GVRWNFAPVLDCGRQQLWSRFPETYGEDVFVGKTMGAAAVRAYEEDGLKNPTAVASCM
                     KHYLGYSAARTGKDRTPAYIPEIELREYYLPQFRAAVKAGASTIMINSGEINGVPVHA
                     SKYLLTDVLRKELGFEGLIVTDWEDIKRLHDRHFVASTPEQAVAMAINAGIDMSMVPG
                     DFS"
BASE COUNT          497 a          524 c          483 g          652 t
ORIGIN      
        1 gaaaaatcgc ctggcaccat actcatgtcg atgcccgcat tgatcgccat ggcgacggct
       61 tgttcgggcg ttgatgcaac aaagtgcctg tcgtgcaaac gcttgatatc ttcccaatcg
      121 gtcactatca atccttcaaa acccagttct ttgcgcagta cgtcggtaag taaatatttg
      181 ctggcgtgaa cgggaacgcc gttgatctcg cctgaattga tcatgatcgt cgatgcgcca
      241 gcttttactg ccgcccgaaa ttgaggcaaa taatattcgc gaagctcgat ctccggtata
      301 tacgcgggtg ttctgtcttt accggtgcgt gctgctgagt aacctaaata atgtttcata
      361 cagcttgcaa ctgcggttgg atttttcaaa ccgtcttctt cgtaagctct tactgctgct
      421 gcccccatcg tctttccgac gaaaacatct tcgccataag tttcaggaaa gcgcgaccac
      481 agctgctggc gaccgcaatc cagcaccggt gcaaaattcc aacgcacacc gcttgcgcgc
      541 agttccatcg cggtgatctt agccgccttt cttgcgagcg tcgtgtcgcg tgttgctgcc
      601 aatgctatac tctgcggaaa caatgttgaa ttaagcgtgt acgtttggcc atgaatgcca
      661 tcgaggccat agatcacggg aatttttagc cgggtgtttt ttgtttcgtc ctggatttgc
      721 gtcatcatgt ttcgccatgt gtttacgtcc aacgcatgcg cagttgtgtt caggatcgat
      781 ccgaccttat agtcctcgat agcttttttc aatgcggcag gatcgagtgc gccatcctgg
      841 tttccccaac cgttctttgc gacaacagcg agcgttacct gtgtcatttg tccgaccttt
      901 tcttccagcg tcatcttttt taataatgcg tccactttct gagcatcggt ttgaccgaaa
      961 caaaaaccga ttgcaagcat tgcagtaaca gtactggtaa gttttttcat gcgtgaaatt
     1021 ttatgcgggg gatgaagata aaataatcaa gaaatttttc tggaaacatt tttcggcaat
     1081 aaacatcact gagcggaagt gcaacattga accctttcag ggttctgttt atcctacatg
     1141 ctaaatccac ggatttcatc cgcggttatt catataacgc cccttcgggg cttgaagcag
     1201 ttacgtaaat tgaaggttgc aacacgagtt tttgcatcag ccgtcgctgc cctgatttgt
     1261 ttgaacgttt ttcacatttg atcacgttga acccttatca gggttctgtt taaccttcat
     1321 gctaatccac ggctttcatc cgcggttatt cgtatgaccc cttcggggct cggagcagtt
     1381 acgtaaattc agatctgcca gacgagtttt catcagccgt cgctgcgtgc tgtgttaaac
     1441 gatcttatgg aaggttgatc attgaacctt ttcagggttc tgtttatcct acatgctaaa
     1501 tgcaggattt catccgcggt tattcatatg gcgccccttc ggggcttgaa gcacttacgg
     1561 aaattgaaag ttgcaacacg agtttttgca tcagccgtcg ctgcgtgctt tgttaaacga
     1621 tcttatagaa cgttgatcat tgaccttttc aaggttctgt ttaacctaca tgctaaagcc
     1681 acggatttca tccccggtta ttcatatggt ggcccttcgg ggcttgaagc agttgccctt
     1741 tcagggttct gtttaacctt cctcgtaatc caccgattcc atcggtggtt attcaaatga
     1801 cgcccattcg gggcttgacg tttgtatgcg ttgaccatct gttaaacaat atgtttcttc
     1861 cgcccttaga aagaaagcca acagaccccg acaggggtcg aacacgcata gccaccggtg
     1921 ccaaccggtg gctatgcgaa tggatgacaa aagaacccga atgggttcaa tgtgttcaat
     1981 cggcccccgc gagtaatcag tatgaatttc atccaaccgc gccttgatgt tgcgaattag
     2041 atgttgttta aaagaaagtt ttcgtttcgg gtgatcgttt taattttttc attggagcat
     2101 taattcagaa ttttgctaaa cgaccttctc aattttttca tatggataac ctcaac
//
LOCUS       DASQJI010000696         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2248178,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000696 DASQJI010000000
VERSION     DASQJI010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2248178"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..878
                     /locus_tag="VEV83_18835"
     CDS             126..878
                     /locus_tag="VEV83_18835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47243.1"
                     /translation="MTKTFFHIAIVLLFFSCSKNQDAATTSNPCNNIVQVLAYNAVTD
                     SYDPDVDIVYDDQQRIKNTKKKGLSQAIYTYYSDSIRLEATDIFGNDISVTYYLDTKN
                     RITKTNFFDYEYTYNDDGYLISFKEPLTSNGHVTGSIQYYLTYENNNLQELYTNDVST
                     DLRQVTMEYYPEPNQILIGYNSPLYLSTVIPDRNSFFLIQAGFYGKESENLIKHIDFH
                     DGYSAADKTYKKDAQGRIIQIPEHYAFNYQCP"
     gene            1055..1597
                     /locus_tag="VEV83_18840"
     CDS             1055..1597
                     /locus_tag="VEV83_18840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47244.1"
                     /translation="MKQIRTLTFTVLIMPIIFVACNTGAPKVAGTDTSAAASNITLPY
                     TANYNTTWSYDVSDSDLLLVLNSYKYWETGDLNSLRSTMGDSMNVNGSNGWKFSGLSD
                     SLMTRWQTFRDSLSSVSISMDAWEKNHSVKDGANFITVWYKEIDTYKTGKVDSANFAD
                     INQVKDGKMTWFSQYKQALK"
     gene            complement(1657..>1884)
                     /locus_tag="VEV83_18845"
     CDS             complement(1657..>1884)
                     /locus_tag="VEV83_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47245.1"
                     /translation="GTVTGAMNFFGQTGAFFLAIVFGKIAQVTNNLNYPLFVVAGVLL
                     VSFLLWLSIDPLQQLKMPVTETASELENARA"
BASE COUNT          585 a          417 c          381 g          501 t
ORIGIN      
        1 tgcctacggg agattgatgg aagtagtcgc acatgatcga cactgctgtg aaacgaaaag
       61 tcaaaacgat aatacaaatt gcccgtaacg agttttaatg ctaatattgt ttcaaacctt
      121 aatcaatgac caaaactttc tttcacattg ctattgtgct gttgtttttt tcatgctcga
      181 aaaaccagga cgccgcaact acgagcaatc cctgtaataa catagtgcaa gtgctcgcct
      241 acaatgctgt taccgattcg tacgatccgg atgtggatat agtgtatgat gaccagcagc
      301 ggatcaagaa tactaagaaa aaaggtttat cgcaggcgat ctacacttat tacagtgaca
      361 gcatcagatt ggaggcgaca gatattttcg gtaatgatat aagcgtaacc tactacctcg
      421 atacaaaaaa cagaattacc aaaacgaatt ttttcgacta cgaatatacc tacaacgacg
      481 acggctatct aatatctttt aaggagccat taacttccaa cggccatgta acgggatcga
      541 tacagtatta cttaacttat gagaacaata atttacaaga gttgtacacg aacgatgtga
      601 gcacagatct caggcaggta acgatggaat actaccctga gccaaaccaa atattgatag
      661 gatataactc gcccctttac ctgtcgaccg tgattccgga caggaactct tttttcctaa
      721 tccaggcagg tttttatgga aaggagtcag aaaacctgat caaacatatc gattttcatg
      781 atggctattc agctgctgat aaaacttata agaaggatgc tcaaggaaga atcattcaaa
      841 tacccgagca ctacgctttc aactaccaat gcccgtgagc ggggaaacga tctttcagat
      901 caattccaat ttgacaacga tcacacattt gagtggataa agcagccgtc tcaactgcac
      961 ctgatccttc gcgcatgaaa catctcgcgt attgacctta tttataccta ccttccgatg
     1021 aaaccattac ttcttcacaa tttaaaattt gcacatgaaa cagattcgta ccttgacttt
     1081 tactgttctt attatgccca ttattttcgt agcatgcaat acgggtgcgc ccaaagttgc
     1141 cggcaccgac acgagtgctg ctgcgagcaa cattacattg ccatatacgg caaactataa
     1201 tacgacctgg agctatgacg tttccgactc cgatctttta ctggtgctga acagctacaa
     1261 atattgggaa acaggagact tgaacagcct tcgctctacg atgggcgata gcatgaacgt
     1321 gaatggctcg aatggctgga aattctccgg gctgtccgac tcattaatga cgcggtggca
     1381 aacgttcagg gatagcttga gttctgtgtc tatttcaatg gacgcatggg aaaagaatca
     1441 ctcggtaaag gacggagcca actttatcac ggtttggtat aaagaaattg acacttacaa
     1501 aaccggcaaa gtagactcag caaacttcgc tgatatcaac caggtgaaag acgggaaaat
     1561 gacctggttc tcgcaataca aacaggcttt aaagtaatat tgacgtctga taaaagtgac
     1621 cccgccgttt ctggaattgg cgggtttatt ttttttctac gctcgtgcat tttcaagttc
     1681 ggatgccgtt tctgttactg gcatctttaa ctgctgtaac gggtcgatgg ataaccacaa
     1741 caaaaagctc acgagcaaca caccagccac tacgaacagc ggataattta gattattcgt
     1801 tacttgcgca atttttccaa aaacaattgc gagaaaaaat gcacctgttt gcccgaaaaa
     1861 attcattgca ccagttacgg tgcc
//
LOCUS       DASQJI010000697         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_556637,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000697 DASQJI010000000
VERSION     DASQJI010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556637"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..395
                     /locus_tag="VEV83_18850"
     CDS             150..395
                     /locus_tag="VEV83_18850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HYK47246.1"
                     /translation="MNIPNEWTEKDNTLYRKLEFKNFSEAFAFMVRVAIEAERMNHHP
                     TWTNVYNKVEISLSTHDAGDIVTDRDVKLAQKINSLL"
     gene            complement(414..1034)
                     /locus_tag="VEV83_18855"
     CDS             complement(414..1034)
                     /locus_tag="VEV83_18855"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYK47247.1"
                     /translation="MEPKHKLPLRSVRLEALGDGIFAVAMTILVIELKWPQLANASFA
                     AFSSSFHQILPELLCYMISFIVLGIMWFGHRMMFEYIGKTNRHFIFLGVLFYMMVCLV
                     PFSTRFVAENALQWGTILVYGSNLSLCNLTLYAQWSYGIKRPHFLERELPDEVRKEAR
                     ISFLISPVVYAIAIVISVWLPIVSIGIFIITPMLYLIPNKLDKYLP"
     gene            complement(1045..1314)
                     /locus_tag="VEV83_18860"
     CDS             complement(1045..1314)
                     /locus_tag="VEV83_18860"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF011003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HYK47248.1"
                     /translation="MAKHIKVTGRVQGVFFRKATQEKAYELHVTGWVKNCDDDSVEIF
                     AQGEQNNLNKFVEWCKQGPPRARVEDIQITDEENEDHVTRFSIVY"
     gene            complement(1484..>1781)
                     /locus_tag="VEV83_18865"
     CDS             complement(1484..>1781)
                     /locus_tag="VEV83_18865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIM24 family protein"
                     /protein_id="HYK47249.1"
                     /translation="VQEKDLQQGELLKIDTGCIVGFTGTVDYDIQFVGGIKNTIFGGE
                     GLFFATLRGPGKVWIQSLPISRLAARILSFATYNRKEEGSVLGRIGNILDGDGY"
BASE COUNT          546 a          414 c          347 g          474 t
ORIGIN      
        1 atggcttgta aagtcagaca gaatagccga ggacgatttt ataaaccttc aacaggactt
       61 gaaaaatata gacggaatac aactagtagc cgaactaaca cacgagaaaa ttaaaaacaa
      121 aacgaacctg atcttctaaa atatttctta tgaatattcc caacgaatgg acagaaaaag
      181 acaatacgct ttaccgcaaa cttgaattca agaatttttc cgaagcgttt gctttcatgg
      241 ttcgggttgc gatcgaagca gaacgaatga accaccaccc cacgtggacc aacgtgtaca
      301 acaaagttga gatctcctta agcacacacg atgccggtga cattgtcacg gacagggatg
      361 taaaacttgc gcaaaagata aatagcctgc tttgacgaat tggtttaacg gctttaaggc
      421 aaatacttat cgagtttgtt tggtatcagg taaagcatgg gcgtgatgat gaagataccg
      481 atacttacta tcggcagcca cacagaaata acgattgcta ttgcataaac aacgggcgaa
      541 ataagaaatg agatccttgc ttcttttcta acttcatcag gtagctccct ctccaaaaaa
      601 tgcggacgtt tgatcccgta gctccactgt gcatataatg tgaggttgca taaacttagg
      661 tttgagccat aaacgagaat agtgccccat tgcaaagcat tttccgccac gaatctcgtg
      721 ctgaatggaa caagacaaac catcatataa aaaagcactc caagaaaaat gaaatgccgg
      781 tttgtttttc cgatatactc aaacatcatt cggtgtccaa accacataat gccgagcaca
      841 ataaagctga tcatgtaaca aagaagctca ggcaaaattt ggtgaaacga ggaagaaaat
      901 gcagcgaacg aagcatttgc gagctgcggc catttcaatt caataacgag tatagtcatg
      961 gcaaccgcaa atatgccgtc gccgagtgct tccaggcgca cagaacgtag cggcaattta
     1021 tgttttggct ccatcgttta cagttcaata cacaatcgaa aacctcgtaa catggtcttc
     1081 attttcctcg tcagttattt gtatatcctc aacgcgggcg cgcggcggac cttgtttgca
     1141 ccattccacg aatttgttca aattattttg ttcgccctgt gcaaatattt caaccgaatc
     1201 gtcatcgcag ttttttaccc atccggtgac atgcagctca taagcctttt cctgtgtggc
     1261 tttcctaaaa aaaacgccct gcacacgtcc cgttactttg atatgtttgg ccatttaaat
     1321 gaataatcag taatgagtaa tgagtgccgc ttcacgttta gctgcattga ttgaatcagt
     1381 tgatgaatga gtaatcagta atgagtaatc aggcaggcga tgattagaaa ctgcctcctc
     1441 attattcatc actcattact gacttcatta ctcatcactc atctcaatat ccgtcgccat
     1501 caaggatatt cccgatccgg ccaagcacgc ttccctcctc tttacgatta tatgtggcga
     1561 atgaaagtat cctggctgca agcctgctga tgggtaacga ttgtatccac acttttcctg
     1621 ggccgcgcaa cgttgcaaaa aacaaccctt ctcctccgaa aattgtgttc ttgatcccac
     1681 cgacaaattg aatgtcatag tccacagttc ctgtaaatcc aacaatgcaa ccagtatcga
     1741 tcttgagcaa ttcgccttgc tgcaggtcct tttcctgcac a
//
LOCUS       DASQJI010000698         2223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_866289,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000698 DASQJI010000000
VERSION     DASQJI010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866289"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VEV83_18870"
     CDS             complement(<1..1194)
                     /locus_tag="VEV83_18870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3570 domain-containing protein"
                     /protein_id="HYK47250.1"
                     /translation="MKKLSLAAIGMFVSILAAFSQNGDDSAYKSRKLKFEEANFVSSY
                     YRQDGDHAAVTGGVGSEKLTDLSNTIDLTISGYDKRYRKHSLIFEAGVDHYTSASSDQ
                     IDPHSISSASHADTRFYPSLNWTMENEKKGTTVGAGLSYSTEFDYQSIGANINFAQKT
                     RNKNGELSAKLQAYFDQVSLIYPIELRTSNGGGGREGDDYASTGRNSFSGSLSWSQIV
                     NERLQVSVEGELIYQDGYLGLPFHRVYFNDATVHVEALPSTRLKIPLGVRANYFVGDK
                     FILRSWYRNYHDDWGINSNAVQLETVVKLTPFFSITPFYRFYQQSAAKYFAPYEEHTA
                     NDEFFTSNYDLSKFNSNFFGAGFRVAPPNGVLNMQHVNALELRFGHYQRTDGLNSNII
                     SLSLKF"
     gene            complement(1211..1447)
                     /locus_tag="VEV83_18875"
     CDS             complement(1211..1447)
                     /locus_tag="VEV83_18875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HYK47251.1"
                     /translation="MKQQTISYRGQLFCMLTIATALITSCTTVKEYQKNKLNDAEMTL
                     SGRKVERTELNFQSYREGASGANGGKTGGGCGCN"
     gene            complement(1444..>2223)
                     /locus_tag="VEV83_18880"
     CDS             complement(1444..>2223)
                     /locus_tag="VEV83_18880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HYK47252.1"
                     /translation="SDDSQTNQINAAAGIAPVQVDQEVFDIISRSNKISQLTQGAFDI
                     TYGSVDKRLWNFDTTMTTLPDAETAKQTVRLINYHNVILNEQERTVFLKEKGMRIGFG
                     GIGKGYAAEMGKRLLRRQGVKSGVVNAAGDLTAWGLQPNGKPWTIGIADPNARTSAFS
                     HLNITNVSVATSGTYAKYALINGKKYSHTIDPKTGLPVTGIKSVTIICPNAEIADAMA
                     TPVMIMGIKTGLNLIDQMKDIACIIIDDKDHIHTSKNIRLT"
BASE COUNT          541 a          501 c          500 g          681 t
ORIGIN      
        1 aaacttcaag ctcagtgaaa tgatatttga gtttaagcca tcggttcgct gataatgccc
       61 aaatcgcaat tcgagcgcat ttacatgctg catgttcaat acaccattgg gcggtgctac
      121 tctgaatccc gcaccaaaaa agttgctgtt gaattttgag agatcgtagt tgcttgtaaa
      181 gaattcgtcg ttcgcggtgt gttcttcata aggtgcaaaa tattttgctg cactttgttg
      241 atagaacctg taaaacggtg tgatcgaaaa gaatggtgtg agctttacaa cagtttccag
      301 ttgtactgca tttgaattaa ttccccaatc gtcatgataa ttgcgatacc agcttcgcag
      361 gatgaattta tcgccgacga aataattcgc tctaacgcct aaaggaattt tcaaccgtgt
      421 cgaaggcaag gcctccacat gcacagtcgc atcgttgaaa tatacccgat gaaaaggcaa
      481 tccaagatat ccgtcctggt atatcagttc tccttcaaca ctgacctgga ggcgctcgtt
      541 gacgatctgt gaccacgaca atgaaccgct gaacgaatta cggccagttg aagcataatc
      601 gtctccttcg cgcccaccac ctccatttga agttctcagt tcaattgggt agatcaaact
      661 gacctgatca aaatatgcct gcagcttcgc tgacagttcc ccatttttat ttcttgtttt
      721 ctgcgcgaaa tttatattgg cgccgataga ttgataatcg aattctgttg aataggaaag
      781 accagcaccg acggttgttc cctttttttc attttccatc gtccagttaa gtgaaggata
      841 aaaacgggta tccgcatgcg atgcagaaga aattgagtgt gggtctatct ggtctgaaga
      901 agcggatgta taatgatcca cgccggcttc gaaaatgaga ctgtgttttc tgtatcgctt
      961 atcatagccg ctgatggtaa ggtcgatcgt gttagaaagg tcggttaact tttctgagcc
     1021 aacgccaccg gttactgcag cgtgatcacc atcctgccga taatagctcg agacaaaatt
     1081 tgcttcctca aattttagct ttctcgattt gtacgcgctg tcatcaccgt tttgtgagaa
     1141 tgcagccagg atacttacaa acatgcctat cgctgcaagt gataacttct tcatgtgcta
     1201 ttttgtaagt ttaattgcag ccgcagccgc cgcctgtttt tccgccgtta gctccggacg
     1261 caccttcccg gtacgattga aaattgagtt cagttctttc aactttcctg cctgatagtg
     1321 tcatttccgc atcattgagt ttattctttt gatattcctt tactgttgtg caggaagtga
     1381 tcaaagcagt tgcgatcgtg agcatgcaga agagctgacc gcgatacgaa atcgtttgtt
     1441 gtttcatgtg agacgaatat tctttgaagt gtggatgtga tctttatcat cgatgattat
     1501 acaggcgata tctttcattt gatcgataag gttcaaaccg gttttgatgc ccatgatcat
     1561 cacgggcgta gccattgcat cagcgatttc cgcattcggg caaatgatgg taacgctttt
     1621 gatgccagtt accggcaaac cggttttcgg atcgatcgtg tgagaatatt ttttgccatt
     1681 gataagcgca tactttgcat aggtgccgga ggtcgctaca gaaacgtttg tgatgttcag
     1741 atgtgaaaac gcggatgttc ttgcattcgg atcggcgata ccgatcgtcc acggttttcc
     1801 atttggctgc aagccccatg ctgtaagatc gccggcggca tttacaacgc cactttttac
     1861 accctgcctt cgaagtaaac gtttgcccat ttctgccgcg tagccttttc caattccgcc
     1921 aaatccaatg cgcatgcctt tttctttaag gaacaccgtg cgctcctgct cgttaaggat
     1981 cacgttatga taattgatga ggcgcaccgt ttgttttgcg gtttctgcat ccggcaaggt
     2041 cgtcatcgtg gtgtcaaagt tccagaggcg tttatctact gagccgtagg tgatgtcgaa
     2101 tgcgccctgc gttagttgag atattttgtt tgaccgtgat attatatcaa aaacttcctg
     2161 gtctacttgc acaggtgcaa tacccgctgc agcatttatt tgatttgtct gactgtcgtc
     2221 gct
//
LOCUS       DASQJI010000699         7521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_252346,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000699 DASQJI010000000
VERSION     DASQJI010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7521
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252346"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..768)
                     /locus_tag="VEV83_18885"
     CDS             complement(43..768)
                     /locus_tag="VEV83_18885"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYK47253.1"
                     /translation="MNDYKLSGNIFEPRATRLYENTNVINVSPQGRSISAAAGTLLYL
                     GFARRKGILPNLMRMGGLYLLYRGLSGNCPITAMLQKEDTKEHIPSVNIRTSFVVNAP
                     RKLVYDTWRDLERLPKFLKHIDKIKVVDEMHSHWVLKTPGKIPSVEWDAEIIEQIDGR
                     ELSWRSLAGSTIETAGKINFADTLNGTELIILITYRPPAGYIGSTIAKLFNRSLKIMV
                     ENDLLRFKAYIENKAMSETEIKV"
     gene            1284..2216
                     /gene="rsgA"
                     /locus_tag="VEV83_18890"
     CDS             1284..2216
                     /gene="rsgA"
                     /locus_tag="VEV83_18890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HYK47254.1"
                     /translation="MRAQVYRSTGSWYTVKNESGETFSARIKGIFKIDQITSTNPIAV
                     GDIVDIEAEDVAENTAVITGICDRKNYIARSSPHSRKHHHIIASNLDQVLLIATLKEP
                     KTSQGFIDRCFVSAEAYHIPPILVFNKIDLYKKKEWEAFEKLQNIYQSLGYPVHKLSM
                     KTMEGVDALTDMLENKITLFFGHSGVGKSTVINHIIPELALSTKEVSGWSGKGMHTTT
                     FAEMFDFPSGGAAKIIDTPGLREFAITDIERPELSHYFPEMRALVPDCKFNNCLHIEE
                     PGCAVKEAVEDGKIYMERYISYYNILQTMPENDY"
     gene            complement(2210..2539)
                     /locus_tag="VEV83_18895"
     CDS             complement(2210..2539)
                     /locus_tag="VEV83_18895"
                     /inference="COORDINATES: protein motif:HMM:NF023724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3630 family protein"
                     /protein_id="HYK47255.1"
                     /translation="MDIGLLTMTGIEHDNNFMKPFEYSTTTEMVISENGSLQKFYRLA
                     NVLSKTRHVHLTAKEDDADIVEWHFKYRGNQLALQYNIYSGVTLLFNGKDMKRANKLA
                     GRLREVQ"
     gene            complement(2726..3256)
                     /locus_tag="VEV83_18900"
     CDS             complement(2726..3256)
                     /locus_tag="VEV83_18900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HYK47256.1"
                     /translation="MATILPCLDKHPEFGSNCFIAPNATIVGDVVMGDECSVWFNAVV
                     RGDVNYIRIGNRVNIQDGAIIHGTYQKNATNVGDNVSIGHGAIIHGCTIHDNVLVGMG
                     AIIMDRCDVQSNSVVAAGAVVLEGTIVESNSIYAGVPAKKVKDLPKDSLYEDIERIAR
                     NYVKYSSWFSDFNAAK"
     gene            3314..4504
                     /locus_tag="VEV83_18905"
     CDS             3314..4504
                     /locus_tag="VEV83_18905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HYK47257.1"
                     /translation="MSYNRELFFRHVAQTSGGPIGLEIVKAEGIYQYDISGKKYIDLI
                     SGFSVANIGHSHPSVVRAVQEQAGAYMHLIVYGEFIESPQTTYAELLTRHLPPSLNCV
                     YFTNSGTEATEGALKLAKRVTGRRKIIAFNNGYHGSSQGALSVLGDEYYRNAFRPLLP
                     GVFHFDYNDDEVVSAIDAETACVILETVQAESGVTAPSKKWLQALRQACTEQGVLLIL
                     DEIQAGFGRTGTLWAFEQFDIIPDVLLLGKALGGGMPLGAFIADKQVIRQLSFDPVLG
                     HITTFGGHPVSCAAGKAAFEVLLGENYIGSVKQKEERLIRQLNHPAIKEKKHFGLWAS
                     LQFESKEITQRIIHNCIAAGLITDWFLFSPDRLRIAPPLTIEPNEIDQACQLIIKAIR
                     EEYA"
     gene            4620..5921
                     /locus_tag="VEV83_18910"
     CDS             4620..5921
                     /locus_tag="VEV83_18910"
                     /inference="COORDINATES: protein motif:HMM:NF017393.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M43 family zinc metalloprotease"
                     /protein_id="HYK47258.1"
                     /translation="MKKLLLVLTICGAVTFAVSGQDITSPVNRCGSYEVYQRMLQSDP
                     TFAKNRKLIEQFTENYSKNATANMTSAVNAPVYTIPVVVHVVYNKAEQNISDAQVLSQ
                     IAVLNQDYEKLNADVSKVPSVWTNLVADCQIKFCLATIDPNGNPTTGIRRVQTTKAQF
                     IDNDAVKFTSKGGDDAWPAGSYLNLWVCKLGNFLLGYAQFPGGPANTDGVVIGYNAFG
                     NNGAAKAPYDLGRTATHEIGHWLNLFHIWGDDGGGCSGSDKVKDTPDQGDRHFGCPRF
                     PFLSCSNGPNGDMFMNYMDYTDDKCMFMFTNGQKTRMSATLAAGGSRNSVTVSGKCGT
                     QPVSLTSSSSNENALTISPNPVNGGYANISYQIGKTAQVQLIILNMYGNVAASINAGT
                     QAAGSYQVKPDAISRLHNGIYVLKLVANGEQLASVSFAVNK"
     gene            complement(5990..6709)
                     /locus_tag="VEV83_18915"
     CDS             complement(5990..6709)
                     /locus_tag="VEV83_18915"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HYK47259.1"
                     /translation="MRSIFLRAEWRKLAILNFSIDPSILKPHLPFGTELDLWNEKCYV
                     SLVAFRFINTRVKGVSVPFHINFEEINFRLYVKYYDKGMWKRGVTFIREIVSKPAMTF
                     VANAIYKEKYITLPTKHTWIHDSAYIKVKYEWKHTAAWDSVAVSANPLATDILPGSEE
                     EFITEHYWGYTRVNDKSTTQYEVAHPRWQVYAVNDFHVNVRFGELYGKEFAFLNDAKP
                     DSVMLSEGSEVVVRLFDKIHS"
     gene            6913..>7521
                     /locus_tag="VEV83_18920"
     CDS             6913..>7521
                     /locus_tag="VEV83_18920"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6597 domain-containing transcriptional
                     factor"
                     /protein_id="HYK47260.1"
                     /translation="MRSLSPIPALKISEYVREILVIENFSVSNPFVLPLYANGAPTLL
                     FHTAKGEINNSSNNLTLFGQTVFPDTLTIKENFTLIAYFFKPSALYSLFGVSGKELAD
                     NPIDLNLLNPSTTIRLQEQLLNASSLKEMIALLDSFVFTLITKVKTSIKLVEFATDQI
                     VRNHSKEVLFKVQKELFVTERTFQRTFERNIGIAPNQYRRICQ"
BASE COUNT         2126 a         1669 c         1706 g         2020 t
ORIGIN      
        1 cctggaaata atattacggt acacagtttt caaaaaattt ccctagactt ttatttccgt
       61 ttcgctcata gccttgtttt caatgtatgc tttaaagcgc aacaggtcat tttcaaccat
      121 aattttcaat gaccggttga acagctttgc tatcgttgag ccaatgtaac ctgccggtgg
      181 gcggtacgtg atcaggatga tcagttccgt gccattgagc gtatccgcga aatttatttt
      241 acctgccgtt tctattgtag aaccagccaa agaacgccag cttaattcgc gaccgtcaat
      301 ctgctcgatg atctctgcat cccattctac tgaaggaatt tttccgggcg tttttagtac
      361 ccaatgtgaa tgcatttcat cgacaacttt tattttatct atgtgtttca agaattttgg
      421 aaggcgttcc agatctctcc atgtatcgta caccaacttt cggggcgcgt taacaacaaa
      481 agaagtgcgg atattcacgg aagggatgtg ttcttttgtg tcctcctttt gcagcatcgc
      541 ggttataggg caattgccgg agagtccgcg atacaataag tacaatccgc ccatcctcat
      601 caagttcggc aaaattcctt ttcttcttgc aaaacccagg tacaggagcg taccggcggc
      661 cgccgatata cttctgcctt gcggacttac attaatcacg tttgtgtttt cgtagaggcg
      721 agtggcgcgc ggctcgaaaa tattgccact taatttataa tcgttcatgg ggaatttgtt
      781 tgagtatgga ataactcaca aacctcattc cattttggtc tttgcgaaaa gctgtaatgg
      841 aaaaagtttc tcacagatgg acacggatgg tcacggatgg ttttcgcacg gagctaacag
      901 agcaaacaga gggttcattg gttgaatggc taacgtagga cgaacacaac agaatctgtg
      961 tacatctgtg aaaatctgtg agagaaaata tttctcaccg atgtacacgg aaagcactga
     1021 ttttttttcg cacggagcta acagagcaag agaggattgg ttcattggct tgagtggcca
     1081 acgtaggtgg aacccaacag aatctgtgcg catctgtgcc aatctgtgag agaacatttc
     1141 tcacggatgt acacgatgat tacggatgtt tctccgcacg aacaaccgac ccaataaata
     1201 ttttctctgt gctctctgtt gcctctgtgc gacagacgca aatctgtgag agaaaaaatt
     1261 tgtcccgcgt tatcttcgtg cctatgcgtg cgcaagtcta cagatcaaca ggtagttggt
     1321 ataccgtcaa aaacgaaagc ggggaaactt tcagcgcaag gataaaaggc atctttaaaa
     1381 ttgatcaaat aacatcaacc aatcctattg cagttggaga cattgtagac attgaggcgg
     1441 aagatgtggc ggaaaacacc gccgtgatca caggcatttg tgatagaaaa aactacatag
     1501 cccgcagttc gccgcatagc aggaaacatc atcatatcat tgcctcaaac ctcgaccagg
     1561 tgttgctgat cgcgacctta aaagagccga agacctcgca gggatttatt gaccgatgtt
     1621 ttgtttcggc agaagcttat catattccac cgatcctggt cttcaacaaa attgatctct
     1681 acaaaaaaaa agaatgggag gcttttgaaa agctgcaaaa catttaccaa tcgctcggat
     1741 atcccgttca caaactaagc atgaaaacga tggaaggtgt ggacgccctg acagacatgc
     1801 ttgaaaacaa gatcacatta ttctttggcc acagcggcgt tggaaagtca acggtgataa
     1861 atcacattat ccccgagctg gcgttgagca ctaaagaagt aagtgggtgg agcggaaagg
     1921 gtatgcatac aacaacattc gccgaaatgt tcgactttcc gtcgggcgga gccgccaaaa
     1981 tcattgatac accaggattg cgggaattcg caataacgga tattgagcgc ccggagttgt
     2041 ctcattattt tccggaaatg agagcgctcg tgccggattg caaattcaat aattgtttac
     2101 acattgaaga gccggggtgt gcggtaaaag aagcggtaga ggacggaaag atttacatgg
     2161 aacgttatat cagttattat aacatcctgc aaacgatgcc tgaaaatgat tattgaacct
     2221 cacgtaagcg acccgccagt ttgttcgctc ttttcatgtc cttcccgttg aaaagaagtg
     2281 ttacaccact gtatatgttg tactgcagcg ccagttgatt accacgatat ttaaaatgcc
     2341 actcgacgat atcggcgtcg tcttctttcg cggttaaatg cacatgacgt gtcttgctca
     2401 acacatttgc aaggcggtaa aacttttgca ggctcccgtt ttcgctaatg accatttcag
     2461 ttgtagtgct atattcaaaa ggcttcataa aattattatc atgctcaata cctgtcatag
     2521 ttaataaacc aatatccatt tagtggatac gaatttttta ttattggagg ttcgtcttaa
     2581 tctaaattta acgctggtgg gaaaccttgc tgcaacttca ccgtacccgt cgctgaaaaa
     2641 aacgccttac tgccaatagg ttaactcaca agcagtaagt tttagatgcg gccgatcaac
     2701 acaatagacg agacagcagg cattgctatt tcgctgcatt aaaatctgaa aaccatgaag
     2761 aatatttaac gtaattccgg gcgatgcgtt cgatatcctc ataaaggctg tctttcggga
     2821 ggtcttttac ctttttggcg ggcacgcccg catagatgga gttcgattcc acgatcgtgc
     2881 cttccagcac gacagcaccg gctgccacga ctgagtttga ctgcacgtcg cacctgtcca
     2941 taataatagc gcccattccg accaggacat tatcgtgaat ggtgcacccg tggatgatgg
     3001 cgccgtggcc gatggagacg ttgtcgccga cgtttgttgc gttcttttga taagtgccgt
     3061 gaataatggc gccgtcctga atattaaccc ggttgccgat gcggatgtaa ttcacgtcgc
     3121 cgcgaacaac cgcgttaaac catacgctgc attcgtcgcc cattactaca tcacccacga
     3181 tggtggcgtt aggggcgatg aaacaatttg agccaaattc aggatgtttg tccaggcatg
     3241 gaaggatcgt agccatatta caagtataga ttttaaaaca caaatttcga attttgcttc
     3301 aataccagtt tgaatgagtt acaacaggga attatttttc cggcatgttg cccaaacatc
     3361 gggaggaccg atcgggctcg agattgtaaa agcagagggc atttatcaat atgacataag
     3421 cggcaaaaaa tacatcgatc tcatttccgg attcagtgtg gcaaacatcg gccattctca
     3481 tcccagcgtt gtcagagcgg tccaggaaca agccggcgca tatatgcatc ttattgtcta
     3541 cggtgaattc attgagagcc cccagacaac ttatgcagag ttgctcacca ggcatctgcc
     3601 accatcgttg aactgcgtat acttcaccaa cagtggaact gaagccaccg aaggagcgtt
     3661 gaagctcgcg aagcgcgtta caggcagaag aaagatcatc gcattcaaca acggttatca
     3721 cggcagcagt cagggagcgc taagcgttct tggcgatgaa tattatcgaa atgcattccg
     3781 gccgctgttg cccggcgttt ttcattttga ttataatgat gacgaagttg taagtgctat
     3841 agatgcagaa actgcatgtg taatattaga aaccgtccag gctgaaagcg gtgtcaccgc
     3901 tccctcaaaa aaatggttgc aggcacttcg gcaggcgtgt acggaacagg gtgtcttatt
     3961 gattttggat gaaatacaag ccggctttgg aagaacgggc accctgtggg catttgaaca
     4021 atttgatatt attcctgatg tgttgctcct cggcaaagcg ctcggaggag gcatgccttt
     4081 gggagcgttt attgcagata agcaggtgat tcggcaactg agctttgacc ctgtgcttgg
     4141 acacataact actttcggag gccacccggt tagttgcgca gcaggcaaag cggcgtttga
     4201 agtgcttctc ggtgaaaatt atatcggatc agtaaaacaa aaggaagaac gattgattag
     4261 acagctcaat catcctgcaa taaaagaaaa aaagcatttc ggcctttggg catccctgca
     4321 attcgaatca aaggaaataa ctcaacgcat tattcataat tgtattgctg ccggcttgat
     4381 cacggactgg ttcctgttct cgccggacag gttgagaatt gcaccacccc tcactattga
     4441 acctaatgaa attgaccagg cttgccagct cataataaag gctatccggg aagaatatgc
     4501 gtgagctgcg aggagctttt tgcgtttttt cactttcccg gaaagcagcc cgatctggtc
     4561 ttcgaaaagt tactttgcgc gatcaaaact ccttatattt ccaccctaaa aattcactta
     4621 tgaaaaaatt attacttgtc ttgaccatct gtggtgctgt gacgtttgct gtgagcggcc
     4681 aggatattac ctcaccggtg aatcgttgcg gcagttatga agtgtaccag cgaatgctcc
     4741 agagtgatcc aactttcgca aagaaccgga aattgattga acagttcacc gaaaactaca
     4801 gcaagaatgc aaccgcgaat atgactagcg ctgtgaatgc gccggtctat acaatccccg
     4861 tcgttgtgca tgtagtttat aataaggctg agcaaaatat cagcgatgcg caggtactga
     4921 gccaaatagc cgtgctgaac caggattatg aaaaactaaa tgctgatgtg agcaaggtgc
     4981 cctcggtatg gaccaacctt gtggcagatt gccagataaa attctgtctt gcgacaatag
     5041 atcccaacgg caatccaacc acgggtattc gcagggtgca aacaaccaaa gcgcagttca
     5101 tagataatga tgcagtgaag tttacgagca agggcggcga cgatgcgtgg ccagcaggtt
     5161 cttatctaaa tctttgggtg tgtaaactgg gaaatttcct gctgggttat gcacaattcc
     5221 cgggaggacc ggcaaatacc gatggagtag tgataggata caatgctttt ggaaataacg
     5281 gcgcggcaaa ggcgccgtat gatctcggaa gaacagcgac gcacgaaatt ggccactggc
     5341 ttaacctgtt tcatatatgg ggcgatgatg gcggtggttg cagtggcagc gacaaggtga
     5401 aagatacgcc tgaccaggga gaccgccatt tcggttgtcc gcgattcccg ttcctatcgt
     5461 gcagcaatgg tccaaacgga gatatgttta tgaactacat ggattatacc gatgataaat
     5521 gcatgttcat gttcaccaac ggccaaaaaa cccgcatgtc tgcgacgctt gcggccggcg
     5581 gatcgcggaa ttctgtgaca gtatcaggta aatgcggtac acagccagtg tcgctgacaa
     5641 gcagcagcag taacgaaaac gcgttgacta tatctccaaa cccggtcaac ggaggttatg
     5701 caaacatctc ctatcaaatt gggaaaacag cccaggtgca attaatcata ttgaatatgt
     5761 atggcaacgt ggctgcgtca ataaatgcag gcacccaggc agccggttct taccaggtga
     5821 aaccagacgc tattagccgt cttcataatg gtatttatgt attgaagctt gttgcgaacg
     5881 gtgaacaact tgcttcggtt tcattcgcgg taaataaata agaaatattt tgtgtcttta
     5941 aaggccgcct taattttttg aggcggtttt tttatttttc acgtggcggt caggaatgaa
     6001 ttttatcgaa caatctcact acaacttctg atccttcgga aagcattacg gaatctggtt
     6061 tggcatcgtt tagaaaagca aactcctttc cataaagttc gccgaaccta acgttcacgt
     6121 ggaagtcatt cactgcataa acctgccatc gtggatgagc aacttcatat tgagtagtgc
     6181 tcttgtcgtt cactcgcgtg tatccccaat aatgttctgt gatgaattct tcttcactgc
     6241 ccggtaatat atcggttgcc aaagggtttg cagacaccgc aacagaatcc caggcagcag
     6301 tgtgcttcca ttcgtatttt actttgatgt aagccgaatc atggatccag gtatgcttgg
     6361 ttggaagcgt tatatacttc tctttataaa ttgcatttgc aacaaaggtc attgccggct
     6421 ttgatacgat ctcgcggata aaagtcacac cgcgcttcca catgcctttg tcatagtatt
     6481 tcacatacaa gcggaaattg atttcttcaa aattgatatg aaatggaacc gaaactccct
     6541 ttacccgcgt atttataaaa cgaaacgcta caaggctcac ataacatttc tcattccaca
     6601 aatcgagttc ggtcccaaac ggcagatgtg gttttaatat agaagggtca atgctgaaat
     6661 ttagaattgc aagtttgcgc cattccgctc ttagaaaaat tgatcgcata gcaatttatg
     6721 attgaagata aagcttgccg gtatattaca ttccgcattt ccggtttatt ctgtgcccat
     6781 gaccgaacta gattaaccga aaaatatttc tggaaaggcc ccttcagatt ttcattcgca
     6841 gaccaggctc gtcattcgaa ataactgccg acatttgagt ggcatggcaa aaaatctgga
     6901 acatttgaac caatgcggtc gctaagccca ataccggccc ttaagatctc ggagtacgtt
     6961 agggagatac ttgttattga gaattttagt gtgtcaaacc cgttcgtatt accactttat
     7021 gcgaatggcg ctccgacatt gctttttcat actgcaaaag gagaaattaa taatagttcc
     7081 aacaatctta ctttattcgg tcaaacagtg tttcccgata cgctcacaat caaagagaat
     7141 ttcacactca tcgcttattt ctttaaacca tctgcgctat actcgttatt tggagtttcc
     7201 ggaaaagaac ttgctgacaa cccgatcgac cttaatttac taaacccttc aacaactata
     7261 aggctgcaag agcaactgct gaacgcaagt tcacttaagg agatgatagc attgctggac
     7321 agttttgttt tcactttgat aacaaaagtc aaaacgagca ttaagcttgt cgaattcgcc
     7381 acggatcaaa ttgtgcgcaa tcactccaaa gaagtgttgt tcaaagtgca aaaggaattg
     7441 tttgttacag aaagaacttt tcaacgaacg tttgaaagaa acatcggaat agcccccaat
     7501 caataccgcc gcatctgcca a
//
LOCUS       DASQJI010000700         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1324339,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000700 DASQJI010000000
VERSION     DASQJI010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324339"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..140
                     /gene="rpmG"
                     /locus_tag="VEV83_18925"
     CDS             <1..140
                     /gene="rpmG"
                     /locus_tag="VEV83_18925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HYK47261.1"
                     /translation="EHKNSGQPGTSRYISTKNKKNTPERLELKKFNPILKKVTVHKEI
                     K"
     gene            210..383
                     /locus_tag="VEV83_18930"
     CDS             210..383
                     /locus_tag="VEV83_18930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4295 domain-containing protein"
                     /protein_id="HYK47262.1"
                     /translation="MAKAAKTAIKTKDQKAAAEAKNWSKVIRAVRSPKTGAYTFKESI
                     VHKDKVKEFLSQK"
     gene            complement(449..1597)
                     /gene="dinB"
                     /locus_tag="VEV83_18935"
     CDS             complement(449..1597)
                     /gene="dinB"
                     /locus_tag="VEV83_18935"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HYK47263.1"
                     /translation="MSPKTYIAHLDLDSFFVSVEILNDPSLVGKPVIVGGSRERGVVT
                     SCSYEARKFGVRSGMPMKKALELCPNALLARGTRGQYSKFSKWVTDIIAAKAPKFQKA
                     SIDEFYLDLTGMDRFFDPFQWTIDLRQQIIDETKLPISFGLASNKLVAKIATDEAKPN
                     GYLFIQHGKEKDFLGPLPVTKIPGVGSHTLAVLSEMGIVYIGDILERSEDEMEKRLGK
                     WGTDLWNKAQGQHYGSVSEWHEAKSISTENTFETNTGDIDFLLSQLVRMTERVAFELR
                     QDGKLAGCIAVKIRYPNFETTSRQTAIDYTFRDDEFIPVAIDLFHKLYRRGKLVRLLG
                     VRLSDFANITVQGNLFDDVSRKSNLYKAIDEIKVKYGKNVVSKARGVK"
     gene            complement(1738..>2043)
                     /locus_tag="VEV83_18940"
     CDS             complement(1738..>2043)
                     /locus_tag="VEV83_18940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HYK47264.1"
                     /translation="SKIKRVTQKVIPDAPHEVLLVLDGSTGQNALEQAKHFTAATDVT
                     AIAITKLDGTAKGGVVLAIANQFKIPVKYIGVGEKINDLLIFDKHEFVDSLFNLERE"
BASE COUNT          576 a          457 c          418 g          592 t
ORIGIN      
        1 ccgagcataa aaacagtgga caaccgggta cgagccggta catttctacc aagaacaaaa
       61 agaatacgcc ggaacgtctt gaattgaaaa aattcaaccc catcctgaaa aaggtgactg
      121 ttcataaaga aatcaaataa acagtttctc tggtttcacc gtgtacacat tttcaagtta
      181 gctaattttc aaattcttaa attaattcca tggcaaaggc agcaaaaaca gcgattaaaa
      241 cgaaagacca gaaggccgct gcagaagcaa agaactggag taaagttata cgtgcagtac
      301 gtagcccaaa aacaggtgcg tacaccttta aggaaagcat tgtccacaag gataaagtga
      361 aagagtttct ctcacagaaa taatagcctt caaaattatt ttgaagctgc tccatcgaag
      421 ggcagctttt tgtttttaag atattgactt attttactcc acgagctttt gaaactacgt
      481 tcttcccgta cttcaccttt atttcgtcga ttgctttata gagattggat ttccttgaaa
      541 catcatcaaa caggttcccc tgcactgtga tatttgcaaa atcactgagc cttacgccaa
      601 gcaggcggac taattttcct cgccggtata gtttgtgaaa aaggtcaatg gcaacgggga
      661 tgaactcatc gtccctgaaa gtataatcga tcgcagtttg cctggaagtt gtttcaaaat
      721 ttggataccg gatctttacc gcaatgcagc cggcaagttt accgtcctgt cttaattcaa
      781 atgccacacg ctcggtcatg cggacaagct ggctcaataa aaaatcaatg tcgcctgtat
      841 tggtttcaaa tgtattttct gttgaaattg attttgcctc atgccattct gaaacgctgc
      901 cataatgctg tccttgcgct ttattccaaa gatcggtgcc ccatttgcca agacgtttct
      961 ccatttcgtc ttcgctgcgt tcaagaatat cgccgatata aactatcccc atctcggaga
     1021 gaacagccag cgtgtgactt cctacaccag ggatcttcgt gacgggcagc ggacctaaaa
     1081 agtctttttc ttttccatgt tgaatgaaga ggtagccgtt aggtttggct tcgtcggttg
     1141 cgatctttgc aacaagtttg ttgctggcca gtccaaaaga aataggcagt ttcgtttcat
     1201 cgataatttg ttgtcgcaga tcgatcgtcc attgaaacgg atcaaagaac ctgtccatac
     1261 ctgtcaaatc aagataaaat tcatctatgc ttgctttttg aaacttaggc gccttggcag
     1321 caataatatc agtaacccat tttgagaatt tgctatactg tccacgcgtg ccgcgtgcaa
     1381 gaagagcatt cgggcacaac tcaagcgctt tcttcatggg catgccggac cgaacgccaa
     1441 attttctcgc ctcatagcta caacttgtaa caacgcctct ttcacggctg cctcccacga
     1501 ttactggttt gccgacaagg gatggatcat ttaatatttc aacacttaca aaaaaggaat
     1561 caaggtcgag gtgtgctatg tatgttttgg gggacaaatt ttgaagaatt ttgaaaacgc
     1621 ctggcaggaa aggtggaaat ccaagttaaa agttacaagt tttgttgagt tgcttgctgg
     1681 tgaattttgc tttttgcatc agtaccgaca tacttcaaaa ctttacctac aaaaccttta
     1741 ttcccgttcc aggttgaaga gactgtcgac gaattcgtgc ttatcaaaaa taagcaaatc
     1801 gtttatcttc tcccctacgc caatgtactt taccgggatc ttaaattgat ttgcgattgc
     1861 cagaacaacg cctccttttg cggttccgtc aagtttggtg atggcgattg ctgtcacatc
     1921 cgttgctgcc gtaaaatgtt tcgcttgttc aagggcattt tgcccggttg aaccatcaag
     1981 caccaacagc acttcgtgcg gtgcatcagg aattaccttc tgtgtaacac gtttgatctt
     2041 cga
//
LOCUS       DASQJI010000701         9680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1482060,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000701 DASQJI010000000
VERSION     DASQJI010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9680
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482060"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1299
                     /locus_tag="VEV83_18945"
     CDS             <1..1299
                     /locus_tag="VEV83_18945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47265.1"
                     /translation="LALPVFNDLSNKALALSYLFDWKLVSGYTALFLATGLLAGFYPA
                     LVLSGYSPVQTLYSRFNLSGKNYLQKSLVVLQFSLASFLIIATFTIYAQFRYLTTQKL
                     GYDDSNLVLVNKQNLTREQAALFKAELLKSPNIVDVASKNGGGWGTVAKVDADSTMQF
                     AYETIDETYIPMLKIQVLKGRNFSKDFPSDSSQSILVNQAFAKKAGWKDPVGHQVDFW
                     YNNKKYTVIGLVADYHFESLTREIAPQLFTMKADNPYGMSLIKIKPHTETASLKYIET
                     TFKRLFPMNPYNYVFKNDENLKNYEAEAKWKQIMLFSAILTIFISCIGLFGLSVLSAE
                     KRTKEIGIRKVLGASVNSVVTILSKDFVKLVVVALLIAIPAAWLAADKWLQDYPYRIT
                     LSWQMFAMAGALVIFIALATVSFQAIRAAVANPVKSLRTE"
     gene            1481..3865
                     /locus_tag="VEV83_18950"
     CDS             1481..3865
                     /locus_tag="VEV83_18950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47266.1"
                     /translation="MFRNYFKTAWRTLGKSKAHSFINITGLSIGMAVAILIGLWMYDE
                     ISFNKNFDNYDRIAMVVQNVTNNGEVQTWKSMPYPLANELRTNYGRDFKHIAMAVSMG
                     DHMVAYGDKKLTTNGGYFEPEAAEMFSLQMVKGDRKALNDPSSILLSESAAKAYFGDA
                     DPMNKILKIDNHVDGKVAGVYKNFPYNCSFADVDFIAPWELFFNNSDGLKTMEDPWRP
                     NFTSLFVQLNDNVDINQASAHIRDAKLKKVNPQLAKKKPTLFLDPMSRWHLYAEYKNG
                     VNVGGDIQYVWMFGIIGVFVLLLACINFMNLSTARSETRAKEVGIRKTIGSLRRQLVF
                     QFFSESILTVLFAFALSLLLVQLTLSFFNQVADKKMSILWENPGFWLLCLLFMLITGI
                     IAGSYPAFYLSSFSPVKVLKGTFKAGRYAALPRKILVVMQFTVSVTLIICVIIVYQQI
                     QFAKNRPVGYSREGLVSVPTITPAIHDHFNAVKDEVMQTGAIVSIAEAGSAPTDVNGS
                     TSGLSWRGKDPNLSIDFQFGSGSYDYGKTIGWKIKEGRDFSRDFATDSSALILNEAAV
                     HFMGLKKPVGEIVTWWDQQLTVIGVVEDMVMQSPYDEPKPMVYSLSSDPGNVVIMRIN
                     PSVSAKDALAKIGPVFKKFNPEQPFEYKFADEEYAKKFDNEERVGKLAGFFAILAVAI
                     SCLGLFGLASFVAEQRTKEIGVRKVLGASVFNVWQLISKDFVMLVMISFFIAVPLAYY
                     FMHNWLQNYDYRTGMSWWIFALAGVGSLMITVFVVSFQSVRAAVSNPVTALRSE"
     gene            3945..6374
                     /locus_tag="VEV83_18955"
     CDS             3945..6374
                     /locus_tag="VEV83_18955"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47267.1"
                     /translation="MTMIKNYFKIAWRNMMRHKIYSAINILGLSIGIAACLLILQYVS
                     FELSYENFHVNKDRIYRVQQDRYDKGKLSTQWAAGAYAVGNSFKNAIPEIEDYVKVVQ
                     DDKATTEVNNQPLKIEKVFFATNSFFSVFTYPLVAGNKNNALQEPFTAALSETTAKRI
                     FGTTNVVGKPLQLNRNTNYTITAVYKDPPVNTQLKPDILLSYSTFVKWTTDSTGKGPE
                     TAWQWDGCLTYLLLRKGADPAVVEKKFVPIVEKFTAEDMKKYNAAVVYHLQPLTDIHL
                     YSHYMEEPGENGDGKTVYLLLGIAFFIVVIAWVNYINLATARAITRAREVGVRKAIGS
                     QRKQLIFQFLSESALLNGFALVIALFMVFLAIPGFNQLSGQHLSVSLFKDFRFWSALA
                     GLFVVGVFLSGLYPAFVLSGFKPIDVLKGKMGSTKQSSFLRKSLVVFQFAASLFLLTG
                     TVIVYQQIQYMRNQSLGINIDQTLVVTGPVVGNDSTFLQRMTAFKQELQNQSSISSIA
                     VSTSIPGQAVGWNAGGIKLVGADESTQNQYRVIGVDYDFIKGYGLKIIAGRAFSKEFG
                     TDDKAVIFNRKGIQQLGFDKPEQAIGKKIDFWGEQYLIVGITENFHEQSLREAYEPLI
                     FRLVPDAHQYVAIKSTAAHAGATISQVKKEWNRFFPGNTFEYFFLDDHFDEQYKADQR
                     FGQVFSLFTSLAILVACLGLFGLASFTTLQRTKEIGIRKVLGASVTSILKLLFGDFAV
                     LLVIAFIIATPVAWLSTSKWLQSYAFRIQLQWIFFVLPFIAIIVIALVTVSFQSVRAA
                     VANPVKSLRTE"
     gene            6538..8979
                     /locus_tag="VEV83_18960"
     CDS             6538..8979
                     /locus_tag="VEV83_18960"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47268.1"
                     /translation="MISSYLKIAFRNLLKRKGYTILNVLGLAIGIGCCLLIFQYVAYE
                     KSYDKFEPQYGQVIRLRLDSYQQGKLAWKSATSYPAFGPLMKKDYPEVEDFCRLIDAD
                     VVLSNDARNLKFKEEKGYFADASVLSMFGIKLTEGNPKTALDAPDKIILSEETAKKYF
                     GNEDPLGKRLVNRTSDYARTFEVTGVFKSFPANSHLIINHLVSYSTLGSILRSFGDTS
                     NSTETALGWYDFYVYLKLKPGTDYKKLEAKFPAFCEKYINNREWEKTNNVRAEIHAIP
                     LSDIHLYSNYNQEAEVNGNGQSVSFLFLIAFLIIGIAWINYINLATARSMERAREVGV
                     RKVLGALRANLIRQFLIESFLLNLAACILALAAVYLLSPSFNQFTGRTENLSFSLPSD
                     YWFGFLAMFLAGSLLAGIYPAFVLSGFQPVTVLKGVFKNSSGGLILRKSLIIAQFATS
                     VVLIAGTIIVYQQVSYMRQQKLGVNINQTLVLKGAESITDSIYQNVFQPFKTDLLKIP
                     GVKNVSASTNVMGEEIYWTNSSRQLAPNSQAVTLYNLGIDYDFIPSYGLKILAGRNFS
                     KDFKSDEKAVLLNEEAARLLGLTDFNKAVTQSIISRGDTVKVAGIVANYHHQGLQKVI
                     DPMIFRLVPNSRGAYSLKIQTNNVKGTIAAVQKAWSKYFPADPFNYFFLDDFFNRQYS
                     ADQMFGKVFGLFASLAILIACFGLLGLSAYNILQRTKEIGIRKILGASIRDLLLLLSR
                     DFLFLVLVSFIIATPLAWWIMYKWLQDYAYRINITWWVFAVAGLAAVFIALVTISFQA
                     IKAALANPVKSLRTE"
     gene            9134..9658
                     /locus_tag="VEV83_18965"
     CDS             9134..9658
                     /locus_tag="VEV83_18965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47269.1"
                     /translation="MLLAKRNKQVRRGFSPNRLDIRFVSPSGKGARSGVKVKRKMRNE
                     VTAAVLCICTYLFFSPIFVFGQQDKVDSSADKIYYFIDADCDHCSIADHKNTKIWIAT
                     NRTYTGSLDERAIVLKKFQDAVGLEFKSDSALIQRAVFRFQDSEEKIKETYAAKYAKM
                     KARGYVVIKTEFDF"
BASE COUNT         2697 a         1957 c         2282 g         2744 t
ORIGIN      
        1 cttgcgttgc cggtgtttaa cgacctttca aataaggcgt tggcgttatc atatttattc
       61 gattggaaac tggtaagtgg ttacacggcg cttttccttg cgacaggctt gctcgctggt
      121 ttttatcccg ctttggttct atctggttac agtccggttc aaacattgta tagcaggttt
      181 aacctttccg gaaaaaacta tcttcaaaaa tctttagtgg ttttgcagtt ttcactcgcg
      241 tcatttttga tcattgccac gtttactata tatgcacagt tcaggtatct cactacacaa
      301 aagctcggat acgacgatag taatcttgtc ctggtaaaca aacaaaacct gactcgtgag
      361 caagcggcat tgtttaaggc agaattgttg aagagcccaa acattgttga tgttgcttca
      421 aagaatggcg gcggctgggg caccgttgca aaagtggacg cggattcaac gatgcagttt
      481 gcttatgaaa caattgacga aacatacatc ccaatgctaa agatccaggt gctgaaggga
      541 agaaattttt caaaggattt tccatcggat tcttctcaat ccattttggt caaccaggcc
      601 tttgccaaaa aagccgggtg gaaagatcca gtggggcacc aggttgattt ctggtacaac
      661 aacaaaaaat atacggtgat cgggctggtc gctgattacc atttcgaatc gttaacgaga
      721 gagatcgcgc cgcaattgtt caccatgaag gccgataatc catacggaat gtcgttgatc
      781 aaaataaaac cccacaccga gaccgcgagc ctgaaataca tagaaactac gttcaaaaga
      841 ttattcccga tgaatcccta caactatgtt ttcaaaaacg atgagaatct taaaaactat
      901 gaagcagagg caaagtggaa acagatcatg ctgttcagcg ccatactgac catctttatt
      961 tcatgcattg gtttgtttgg cttatcagtt ttgtcagcag aaaaaagaac gaaagaaata
     1021 ggcatcagga aagtccttgg tgcttcagtc aacagcgttg taacgatcct ttcgaaagac
     1081 tttgtgaaat tagtggtcgt ggccttactg atagcaatac ctgcagcatg gcttgcggca
     1141 gataaatggt tgcaagacta tccataccgc atcaccctga gctggcaaat gtttgcgatg
     1201 gcgggcgcac tggtgatctt tattgcactt gcaacagtta gcttccaggc aataagagca
     1261 gcagtagcga accctgtaaa aagtttgaga acggaatgat gaaaatgagt gatgagtaat
     1321 cattagttga acgtttgatg tttgacggtt gaggtttgag gtttgaacgt ttttaaaatc
     1381 tgaaatcccc gcctgaacga ctcagtcggg caggtgcaat cgccaatctg caatggtaaa
     1441 tcgtaaatca taattcttaa atcgtaaatc gctaatcagc atgtttcgaa attattttaa
     1501 gaccgcatgg cggaccctgg gcaagagtaa agctcattcg ttcatcaata ttaccggctt
     1561 atctataggc atggcggtgg caatccttat tggtctgtgg atgtacgacg aaatatcatt
     1621 caataaaaat tttgacaatt acgatcgcat cgcgatggtc gttcaaaatg tcaccaataa
     1681 tggggaagtt caaacatgga agagtatgcc ttacccattg gcaaatgaat tacgcaccaa
     1741 ctacggtcgc gacttcaaac acattgccat ggccgtatcg atgggcgatc atatggtagc
     1801 atatggagac aagaagttaa ccacgaacgg tggctatttc gagccggaag ctgctgaaat
     1861 gttttcgttg cagatggtga agggtgatcg aaaagccttg aacgatcctt cgtcgatact
     1921 cttgtctgag tcggctgcga aggcatattt tggtgacgca gatccgatga acaagatact
     1981 caagatcgac aaccatgtgg atggaaaagt tgcgggcgtg tacaaaaact ttccttacaa
     2041 ctgcagtttt gcggatgtcg atttcatcgc gccatgggag cttttcttca acaactccga
     2101 cggtttaaaa acaatggagg atccgtggag gccgaatttc acttcgctct ttgtacagct
     2161 gaacgacaat gttgatataa accaggcatc agcgcacatc agggatgcaa aactgaaaaa
     2221 ggttaacccg cagctcgcaa agaaaaagcc aacgctgttt cttgacccga tgagcaggtg
     2281 gcatttatat gccgaatata aaaatggtgt gaacgtgggc ggagacattc agtatgtgtg
     2341 gatgttcggt ataataggcg tgtttgtttt attgctggct tgtataaatt tcatgaacct
     2401 gagcacagcg cgaagcgaaa cgcgtgcaaa agaagtaggc attcgtaaga cgatcggctc
     2461 gttgcgccgg caacttgtgt tccagttctt cagtgaatca atactcacag tcctttttgc
     2521 atttgcgctg tcgttgcttt tagtgcagct cacactttct tttttcaacc aggtcgccga
     2581 taaaaagatg tcgatcttat gggagaatcc gggtttttgg ttattgtgtc ttttgtttat
     2641 gctcatcaca ggcattatcg ccggcagtta tcctgcattt tatttgtctt cattcagtcc
     2701 ggtcaaagtt ttgaaaggca catttaaagc aggacgttat gctgcgcttc cacgaaagat
     2761 acttgtagtg atgcaattca ctgtttctgt aacgctcatc atctgtgtga tcatcgttta
     2821 ccagcaaatt cagtttgcaa aaaaccgtcc tgttggttat tcacgcgaag gactggttag
     2881 cgtgccaaca ataactcccg cgatccatga tcattttaat gcggtgaaag atgaagtcat
     2941 gcaaaccggc gcaatcgttt caattgctga agcgggtagt gcgccaaccg acgtgaacgg
     3001 cagcacaagc ggtctgagtt ggagaggaaa agaccctaat ctttctatcg attttcagtt
     3061 cggaagtggt tcttatgact acggtaaaac gattgggtgg aaaattaaag aaggccgcga
     3121 tttttcccgt gactttgcaa cagattcatc agcgcttatc ttaaacgagg ctgcagtgca
     3181 tttcatgggt ttgaaaaagc cggtgggtga gatcgtaacc tggtgggatc agcagttgac
     3241 cgtaattggc gtagtagaag atatggttat gcagtcgcca tacgacgaac cgaaaccgat
     3301 ggtatatagc ttgtcaagtg acccgggcaa cgttgttata atgcggatca atccttctgt
     3361 gagcgcaaaa gatgcactcg cgaagatcgg cccggtgttc aagaaattca atccggagca
     3421 acctttcgag tacaagtttg cagatgaaga atacgcgaag aaatttgaca atgaagaacg
     3481 cgttggaaaa ctcgccggtt tctttgcgat actggcggtc gcgatttcgt gtcttggctt
     3541 gttcggactt gcatcgtttg tagcagagca gcgcacaaaa gagatcggcg ttcggaaagt
     3601 gctgggtgct tccgtgttca atgtttggca actgatctca aaagattttg taatgcttgt
     3661 catgatctca ttcttcattg ctgtgccgct cgcatattat tttatgcaca attggttaca
     3721 gaattatgat tatcgcacag gaatgtcgtg gtggatattt gcgctcgcag gagtgggatc
     3781 attgatgata accgtttttg tggtgagctt tcaatcggta cgcgctgccg tgtcaaatcc
     3841 cgtgacagcg ttacggagcg aatgatgaat gtttgatgtt tgatgtttga ggttttgatg
     3901 tttgatgttt gaagcaaatc tgtaatctaa aatctgcaat cgaaatgacc atgataaaaa
     3961 attattttaa gatcgcatgg cgcaatatga tgcgtcacaa gatctattcg gcaattaaca
     4021 ttctcgggct gtcaatagga attgctgcgt gtttactcat tttgcaatat gtatcttttg
     4081 aattgagcta tgagaatttc catgttaata aagaccggat ctatcgcgta cagcaagatc
     4141 gttacgacaa gggaaaacta agcacacagt gggcggcggg cgcttacgcc gtaggcaatt
     4201 cgttcaagaa tgcaataccc gaaatagaag actacgtaaa ggttgtgcag gatgacaagg
     4261 caaccaccga agtaaacaac caaccgttga aaattgaaaa agtattcttt gccaccaatt
     4321 cattcttcag tgtttttaca tatccgttgg tcgcaggcaa caagaataac gctttgcaag
     4381 aaccatttac tgcagcgctt tctgagacca ctgcaaaaag gatctttggc acaacgaacg
     4441 ttgttggcaa gccgttacaa ttgaaccgga acaccaatta tacgatcaca gcggtttata
     4501 aggatccacc agtcaacaca caacttaagc ctgacatact gctatcatat tcaacgtttg
     4561 tgaagtggac cacagactct accggaaaag ggccggaaac agcatggcaa tgggacggct
     4621 gtcttactta tttgttattg cggaaaggcg cagatcctgc tgttgtcgaa aaaaagttcg
     4681 tgccgatcgt tgaaaaattt acggcggaag acatgaagaa gtacaacgcc gcagttgttt
     4741 atcatttgca gcctctgacc gatattcatt tgtattctca ttatatggag gaacccggcg
     4801 aaaatggtga cggaaaaact gtttacctgt tgctggggat cgcatttttt atagttgtta
     4861 tcgcctgggt aaattacatt aacctcgcaa cagcacgtgc gatcacacgc gcaagggaag
     4921 tgggagtacg caaagcgatt ggctcgcaac gcaaacaact catctttcaa tttctatccg
     4981 aatcagcttt gttgaatggg tttgcattgg tcattgcatt gttcatggtg ttccttgcca
     5041 taccaggctt taaccagctc tcaggccagc acctttcggt ttcattgttt aaagactttc
     5101 ggttttggtc cgcgcttgct ggtttgttcg ttgttggtgt atttctttcc gggttatatc
     5161 ctgcgtttgt attgtctggc tttaagccga tagatgtatt gaaggggaaa atgggcagca
     5221 ctaaacaaag ctcattcctg agaaaatcat tagtagtatt tcaatttgct gcttcgctgt
     5281 ttttattgac aggtacggta attgtctatc agcagatcca gtatatgcgc aatcaatcac
     5341 tcgggataaa tattgatcaa actttggttg taacggggcc ggttgtaggc aatgattcta
     5401 cttttttgca gaggatgaca gcttttaaac aggaactcca gaatcaatcg tcgatcagca
     5461 gtatcgcagt atctaccagc attccgggcc aggccgttgg atggaatgca ggaggaatta
     5521 agcttgtggg tgcggatgaa tccacgcaaa atcaatatcg tgttatcggc gtcgattatg
     5581 attttataaa agggtatgga ttgaaaataa ttgcgggccg cgcattttcg aaagaattcg
     5641 gaacagacga taaggctgtc atttttaaca ggaagggcat acaacaattg ggctttgata
     5701 aacccgaaca ggcaatcggt aaaaaaattg atttttgggg agagcagtat ttaatagttg
     5761 gcataactga aaatttccat gagcagtcgt tacgcgaggc gtatgaacca ttgatctttc
     5821 gacttgtgcc agacgcgcat caatatgttg ccataaaatc aacagccgca catgcagggg
     5881 caactatcag ccaggtaaag aaagagtgga atagattttt tcccggcaac acattcgaat
     5941 atttcttttt agacgaccat tttgatgaac aatataaggc ggatcagcgc ttcggccagg
     6001 tattcagttt atttacgagc cttgcgatcc tcgttgcctg cctgggtcta tttggccttg
     6061 cgtcattcac cacgctgcag cgcacgaagg agattggcat acgtaaagta ctaggtgcgt
     6121 cagtgacaag cattttgaaa ttgcttttcg gtgattttgc tgtgttgcta gtgatcgctt
     6181 ttataatcgc cacgccggtt gcatggctaa gtacctcgaa gtggctgcag agttatgcct
     6241 tccgcattca attgcaatgg atattttttg tgttgccatt tattgccatc atcgtgatcg
     6301 cactcgtaac ggtaagcttt caatcagtcc gtgctgcagt ggcgaatcct gtgaaaagtt
     6361 tgagaacgga atgatggaat gaatgatgag tgatcagtaa tgagtgacca ttgtgaatgg
     6421 tgaatggttg ttttatttgt ggggtgactt tgaagttgcc taaatctgca atctgcaatc
     6481 gccaatctgc aatcgtaaat cgtaaatcgt aatttgtaaa tcgtaaattg atcctccatg
     6541 atatcaagct atcttaaaat tgcgtttcgc aacttattaa aacgaaaagg ctacacgata
     6601 ctcaatgtac ttggtttggc gattgggatc ggttgctgtc ttcttatttt tcaatacgtc
     6661 gcctacgaaa aaagctacga taagttcgag ccgcaatatg ggcaggtcat tcgcttacgc
     6721 ttagattctt atcaacaggg taaactcgcg tggaaatctg caacctctta ccccgctttc
     6781 ggtccattga tgaagaaaga ttaccctgag gtagaagatt tttgccggct tatagatgct
     6841 gatgtcgtat tatcaaacga tgcgcgaaat ctaaaattta aagaggaaaa aggctacttc
     6901 gccgacgctt ccgttttgag catgttcggg ataaaactga ctgaaggaaa tccaaaaact
     6961 gcattggatg caccggataa aatcattttg tcagaagaga cagcgaaaaa atattttggc
     7021 aacgaagatc cattgggaaa aaggctggtg aatcgtacgt ccgactacgc tcgcacattc
     7081 gaagtgaccg gcgtatttaa aagttttccg gccaactcgc atcttatcat caatcatctc
     7141 gtgtcttatt cgacgttggg cagcattctg cgctcttttg gagatacttc gaactcaacg
     7201 gagacagccc tcggttggta cgacttctac gtatatctca aactaaaacc gggtaccgac
     7261 tacaaaaagc tggaagcaaa atttccggca ttttgcgaaa aatatataaa caaccgggag
     7321 tgggaaaaaa caaataacgt tcgtgccgaa attcacgcaa ttcctttgag cgatatacac
     7381 ctgtattcga attataacca ggaagcggag gtgaacggta acgggcaatc agtttcattc
     7441 ctttttctca tcgcgtttct tattattggt attgcgtgga tcaactatat aaatctcgcg
     7501 actgcccgat cgatggaaag agcaagagaa gttggcgtga ggaaagtgct gggtgcgctt
     7561 cgtgcaaacc tcatccgtca atttcttatc gaaagttttc tgttgaacct cgctgcatgt
     7621 atactggcgt tagcagccgt ttacttacta agtccatcgt tcaaccagtt tacaggccga
     7681 accgaaaact tgtctttttc tttgccttct gattattggt ttggtttcct tgcgatgttt
     7741 ctcgcaggaa gtttgctggc aggcatttat cctgcgtttg tgctttcagg atttcagccg
     7801 gtgacggtat taaaaggagt tttcaaaaat agcagcggcg gtttgatcct gagaaaatct
     7861 ctcatcatcg cgcagtttgc aacgtcggtt gtgttgatcg ccggaactat aattgtgtat
     7921 cagcaggtga gttatatgcg acaacaaaag ctgggcgtta acatcaacca aacgcttgtt
     7981 ttaaaaggag ccgaatcgat cactgattca atttatcaaa atgtttttca gccattcaaa
     8041 accgacctgc tgaaaatacc cggcgtaaaa aatgtctccg cttcaacgaa tgtcatgggc
     8101 gaagagatct actggacgaa cagctcgcgc cagctggctc caaatagcca ggcagtgaca
     8161 ctgtataacc tgggcattga ttacgatttt atcccttcat acggcttgaa gatccttgca
     8221 ggaagaaatt tttcgaagga cttcaagtcc gatgaaaagg cagttttact aaacgaagaa
     8281 gcggcaaggc tcctcggcct tacagatttt aataaagcgg tgacccaatc tattatttca
     8341 agaggtgaca ctgtaaaggt cgccgggatc gttgcaaatt atcatcacca gggtttgcaa
     8401 aaagtgatcg acccgatgat ctttcgtctt gttcccaaca gcaggggcgc atattctcta
     8461 aagatccaaa caaacaatgt aaagggcacc atcgccgcag tgcaaaaggc atggagcaaa
     8521 tattttccag ctgatccatt caattatttt ttcctcgatg atttctttaa ccggcaatat
     8581 agcgccgacc agatgtttgg gaaagtgttc gggctctttg catctcttgc gatactcatc
     8641 gcctgctttg gtttgctggg attatccgca tataatattc ttcagcgtac aaaagaaatt
     8701 ggcattcgca agatacttgg agcttccatc cgcgacctgt tattgctgtt gtcaagggat
     8761 tttctttttt tggttctcgt ttcgtttatc attgcaactc cgttggcgtg gtggatcatg
     8821 tataagtggc tgcaggatta cgcctatcgc atcaacatca cctggtgggt gttcgcggtt
     8881 gcaggattag ctgcggtttt tattgcgtta gtgactataa gcttccaggc tattaaggcg
     8941 gcgctggcga acccagtgaa gtcgctgaga acggagtgag aagaaatgtc aattgtgaat
     9001 tgtgaattgt gaattgtgaa tacgcaattg tgaatgtaag accgcgcgcg gattattcgt
     9061 tttagcgagt atcgtgtgta aaaacctgtc cggtctaaag gtcctgttag atctccggta
     9121 aacaattctg aatatgttac tagcgaaaag gaataaacag gtgaggcgtg gcttctcgcc
     9181 aaacagactc gacatccgct tcgtttctcc ttcaggcaaa ggtgcacgaa gcggagtcaa
     9241 ggtgaaaaga aaaatgagaa atgaggttac agcggcggta ctgtgtattt gcacttatct
     9301 cttcttcagc ccgattttcg tgtttgggca gcaggataaa gtggactcaa gcgcggataa
     9361 aatatattac tttattgacg ccgattgtga tcattgttcg attgccgatc ataaaaacac
     9421 gaagatctgg atcgctacga acaggaccta cacgggcagc ctcgatgaaa gggcgattgt
     9481 tttaaaaaag tttcaagacg ctgtaggtct tgaattcaaa tcagattcag cattaattca
     9541 gcgcgcggta tttcgtttcc aggattcaga agagaagata aaagaaacct atgctgccaa
     9601 atacgcgaag atgaaagccc gtggatatgt tgtaataaaa acagagtttg atttttaact
     9661 gaaatctatg ttcaaaaatt
//
LOCUS       DASQJI010000702         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2096338,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000702 DASQJI010000000
VERSION     DASQJI010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2096338"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VEV83_18970"
     CDS             complement(<1..491)
                     /locus_tag="VEV83_18970"
                     /inference="COORDINATES: protein motif:HMM:NF018766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HYK47270.1"
                     /translation="MNNNKLPAFERLLLFSFLLTFGILFYRCIFSGSFHYTFLLWNLF
                     LAATPYFVSKQLAKCKDLSFKAVVLLTSWLLLFPNSPYILTDIFHFAPKDNIPFWYDS
                     LLFFSAAWTGLLPGLVSLGKVEAFLSGHLQKFWIKASIFFCLLLSGYGVYLGRFLRFN
                     SWDV"
     gene            852..>1858
                     /gene="carA"
                     /locus_tag="VEV83_18975"
     CDS             852..>1858
                     /gene="carA"
                     /locus_tag="VEV83_18975"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HYK47271.1"
                     /translation="MPQIQQSAFLLLQDGSFFQGKAFGKIGTTTGEICFNTGMTGYQE
                     VFTDPSYYGQVLIMNSVHIGNYGVNKFDQESTSVKIRGLIGRNLEERFSRYQATDSLD
                     AYLKANNIVAIEGIDTRSLVAHIRTKGAMNCIISSEITDRDSLRKALDNVPDMDGLEL
                     ASMVSTDKVYEVGSADAPLKVAVLDYGVKQNILTSLAGRGVYAKVFPAKTSVQELKAF
                     DPHGYFLSNGPGDPAAMPYAIDTVKELLKEDKPLFGICLGHQLLALANDIPTFKMHHG
                     HRGLNHPVKNIISGHCEITTQNHGFGVNPQAVRDDASIEITHVNLNDESIEGIRMKNK
                     PA"
BASE COUNT          572 a          418 c          438 g          430 t
ORIGIN      
        1 acatcccagc tattaaatcg aagaaatctc cccaaataaa cgccgtaacc agataacaaa
       61 agacaaaaaa agatcgacgc cttgatccag aatttttgca aatgacccga gagaaatgct
      121 tccacttttc caagcgacac cagtccgggc agtaaacctg tccatgctgc ggagaaaaac
      181 agcaggctat cataccagaa aggaatattg tctttcggcg caaagtggaa tatgtcagta
      241 agaatgtaag gcgagtttgg aaacagcaac aaccaggagg tgagcaaaac caccgcctta
      301 aaactaaggt ctttgcattt agcgagttgc ttgcttacaa agtatggagt cgccgccagg
      361 aataagttcc atagcaggaa tgtataatgg aaactgccag aaaagatgca acggtaaaaa
      421 agaattccaa acgtcaacag gaatgaaaag agcaacaacc gttcaaaggc aggtagctta
      481 ttattattca taacccaaaa ttttctgatt gagtgcaaag ttgatacgca gtttattagc
      541 agtaattagt ttcacttttt tttaaaaatg aaatgttaga gggagtgggg agagtggagc
      601 acgacgaacg aagcgtggca cagacacaac gtgacttgtg ttggggattc gtcattagca
      661 ctcgggatca caggacttga ggcgtcatgt cgttttcgtt tcaattgtga acaacacgaa
      721 acccaggtcc gctcctttgt ggactttgtg agtccgtagt gtccgttgtg ctccagaacc
      781 cctctggaaa actttctatt caagtttcaa cacgatatat ttcttttgca ttttgaaacc
      841 atttcaaaaa aatgccccaa attcagcaaa gcgcttttct tctcctccag gacggcagtt
      901 tttttcaagg taaagcattc ggaaagatcg ggaccacaac gggtgagatc tgcttcaaca
      961 ccggtatgac cggctaccag gaagtcttta ccgatcccag ttactatgga caggtgctga
     1021 tcatgaacag cgttcatatc ggcaactatg gtgtgaacaa gtttgaccag gagagcacgt
     1081 ccgtgaaaat tcgggggttg ataggccgga atcttgaaga aaggttttca agataccagg
     1141 ccacggatag cctcgacgct tacttaaaag ccaacaacat cgtagccatc gaagggatcg
     1201 acacgcggtc gctcgtcgct cacataagaa cgaaaggcgc gatgaactgc atcatctctt
     1261 ccgagatcac ggaccgcgat tcgcttagaa aggcactcga taacgtccct gatatggacg
     1321 ggcttgaact ggcgagcatg gtaagcacgg acaaggtgta cgaagttgga agtgccgatg
     1381 cgcccctaaa agttgcggtt cttgattatg gcgttaagca aaacatccta acatcactgg
     1441 ccggcagggg agtatacgcg aaagtttttc cggctaaaac atcagtgcag gaattgaagg
     1501 catttgatcc gcatggatat tttttatcca atggtccggg cgatccggcg gctatgccat
     1561 atgcgatcga taccgtaaag gaattgctga aggaagacaa accattgttc ggcatatgcc
     1621 tcggtcacca gctactcgca ttggcgaatg acattccaac ctttaaaatg caccatggac
     1681 acagggggct gaatcatcct gtaaaaaata tcatctccgg ccactgcgag atcaccacgc
     1741 aaaatcatgg gtttggcgta aacccgcaag cagtgcgcga cgatgcctca attgagatca
     1801 cacacgtaaa tcttaatgat gaaagcatcg aaggcatccg catgaaaaat aaacccgc
//
LOCUS       DASQJI010000703         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1482565,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000703 DASQJI010000000
VERSION     DASQJI010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482565"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VEV83_18980"
     CDS             <1..234
                     /locus_tag="VEV83_18980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47272.1"
                     /translation="EYAETGITVNGLAPAVIKTPMNDNTAPEQLAYMTAKIPMKRLGT
                     VEEVAALAAWIVSKESSFNTGFVFDISGGRATY"
     gene            complement(422..679)
                     /gene="rpsT"
                     /locus_tag="VEV83_18985"
     CDS             complement(422..679)
                     /gene="rpsT"
                     /locus_tag="VEV83_18985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HYK47273.1"
                     /translation="MANHKATKKDTRQADKRRERNRYYGKTTRNAIRELKASKDDKAY
                     GDTLPNVISMIDKLAKKGVIHKNKASNLKRKLSKRKAAATA"
     gene            complement(758..1483)
                     /locus_tag="VEV83_18990"
     CDS             complement(758..1483)
                     /locus_tag="VEV83_18990"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK47274.1"
                     /translation="MKKEQVVDFYDAFVEEQSRSGINDRLYFLHKRMLQFGLKKDSRV
                     LELGCGIGAMTYLFSKTVTAGCVEAIDMSPASIRFATTRIRKPNVNFHVADVVNYKPS
                     GREFDFITLFDVIEHIPIEHHDELFKNISGVCGDQTVILINIPSPGSIEYDRIHQPQL
                     LQVIDQPIELGFLNHVLVNNGLELIFFERCSIWNEGDYHFFVARKHSPFSEISLAGKR
                     NLLQKALKKIERTWIKRFYKYPQ"
BASE COUNT          436 a          367 c          333 g          477 t
ORIGIN      
        1 gagtatgcag aaaccgggat cacggtgaat ggccttgcac ccgctgtgat aaaaacgcca
       61 atgaatgata acaccgcccc tgaacaactt gcatacatga ccgcaaaaat tcccatgaaa
      121 cgtttaggca cggttgaaga agtcgcggcg ctcgccgcat ggatcgtttc aaaagaatca
      181 agtttcaata ccggatttgt gtttgatatc tcgggtggga gagcgacgta ttgactgaga
      241 gtttgaggct tgaagtttga ggtttgaagt ttgaggtttg aggttcacac agaacacaaa
      301 gcgcaaacaa aatctctgtt atctctttag ctctgtgcgc aacaactccg acgtgcggcc
      361 tcaaaataaa aatcccccgc agagcgaggg aaatttatca ttcaacaacg aataagttat
      421 cttatgcggt agcagcagct tttctcttag aaagttttct tttcaaattg ctcgccttgt
      481 tcttatggat cactcctttt ttcgccagct tatcgatcat cgatattaca ttgggtaaag
      541 tatcgccgta agccttgtcg tctttcgacg cctttaattc cctgatagca ttacgcgtgg
      601 ttttgccgta gtaacgatta cgttccctgc gtttgtcagc ctggcgcgta tccttttttg
      661 ttgccttatg atttgccata attattctta cccctgaatt ttgggcaggc aaaggtaagg
      721 gctggcgata aattggaaaa atttaattga actattctca ctgcggatac ttgtaaaacc
      781 gttttatcca tgttctttcg atttttttta acgctttttg taacaagttg cgtttcccgg
      841 caagacttat ctcgctgaat ggtgaatgct tacgcgctac aaaaaaatga tagtcgcctt
      901 cattccagat actgcacctt tcaaaaaata ttagttccaa tccgttgtta accagcacat
      961 gattcagaaa tccaagttcg atcggctgat cgatcacctg taacaactgc ggctggtgta
     1021 tccggtcata ttctattgag cctgggcttg gtatgttgat gagaataacc gtttgatcac
     1081 cgcacacacc actaatattt ttgaatagct cgtcatggtg ttcaattgga atgtgttcaa
     1141 tcacatcaaa caacgtgata aaatcaaact cacgcccaga gggcttataa ttcacaacgt
     1201 cagcaacatg gaaattaaca tttggcttgc gaatcctggt tgttgcaaac cggatcgatg
     1261 cggggctcat atcgatcgcc tcaacacatc ccgcggtcac cgtttttgaa aaaagatagg
     1321 tcatcgcgcc tatgccacac ccaagctcca gcacccgcga gtcttttttc aagccaaact
     1381 gcaacattct cttatgcaag aaatatagcc ggtcgttaat gcccgacctg ctttgctctt
     1441 caacaaaggc atcataaaag tcaacgacct gttccttttt cactgctcta agataggagt
     1501 acatttttat tgtcggctta ccggaaaccg gggagctatt tggtaagttt gtaccgcaaa
     1561 accgatattt gtagcaatat cggcggatca tttataaata acttgcttcc atg
//
LOCUS       DASQJI010000704         2791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_868055,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000704 DASQJI010000000
VERSION     DASQJI010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868055"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1666)
                     /gene="crtI"
                     /locus_tag="VEV83_18995"
     CDS             complement(176..1666)
                     /gene="crtI"
                     /locus_tag="VEV83_18995"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016166 - phytoene dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene desaturase family protein"
                     /protein_id="HYK47275.1"
                     /translation="MREKNLVIIGSGFAGLSAACFMAKAGWKVTVLEKLEQPGGRARQ
                     LQAGGFSFDMGPSWYWMPDVFERFFQQFGKRVSDYYDLVRLDPSYRIYWQDDATDIPA
                     DYNDLKTVFEKLEPGSSDQLDKFLTEAAYKYKAGMQKLVYKPGLSGAEFFDADLLMGI
                     LRLDVFTSVKKHVSKYFKNPKIRQMLEFPVLFLGAVAEKMPALYTLMNYADIKGGTWF
                     PKGGMYSVVDAMYQLAVECGVHFHFNHEVLQIEVANDNARRVIARAHGNRQEAYEADV
                     IIGNADYHHIESKLLPANSRNYSEAYWNKRVMAPGCILFYVGLNKKLRNIVHHSLFFD
                     TSFDEHASDIYTTKQWPANPLFYVSATSCTDDSLAPPGHENLFFLIPVAAGLADDTDE
                     RREYFFNKIVDRYEARIGERIRGNIAFKRSFAYSDFVNDYHAFKGNAYGLANTLKQTA
                     ILKPSMRNKKLKNVFYTGQLTVPGPGVPPAIISGEVVAKYVMNEFS"
     gene            complement(1676..2176)
                     /locus_tag="VEV83_19000"
     CDS             complement(1676..2176)
                     /locus_tag="VEV83_19000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK47276.1"
                     /translation="MPVPEFTQALTKNAEYLKPVAITLTQDPQDASDLLQETIFRALA
                     HSDKYSIGTNIKAWLYIIMRNVFINDFRKRVKRNVIPDYSAEDLLYNSPQTATANTAI
                     STIRIKEIQAAIAKLPGILKAPFVLYFEGFKYKEISNMLNEPMGTIKSRIHFARKLLR
                     AQVERF"
     gene            complement(2280..2750)
                     /locus_tag="VEV83_19005"
     CDS             complement(2280..2750)
                     /locus_tag="VEV83_19005"
                     /inference="COORDINATES: protein motif:HMM:TIGR03511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility lipoprotein GldH"
                     /protein_id="HYK47277.1"
                     /translation="MSLRTYTVVVLLIMLLHACTTLDVYEKTAPLPRHEWQSSNSLPF
                     TFDIQDSTGYYNFYFVIRHTESYHYNNIWINLNFAFPNQKPRTQRFNIELANANNGWL
                     GTAMDDIIEQRLLINKQPLHLQPGTYRFTIQQIMREDPLQNVLNAGLRVEKVVR"
BASE COUNT          759 a          610 c          590 g          832 t
ORIGIN      
        1 gaagaagact gactcataac tgtaataaat ataaaataat tatggcagca tccgggatga
       61 agataggaaa acaattttat tcaactcatg gtgatattcg ggagggcgtg ttattgagac
      121 aaacacagaa aagtgttttc acggagcaag ttgcctatag ccacgattga tgtattcaac
      181 tgaattcgtt cattacatac ttcgctacaa cttctccgct gatgatggca ggcggcacac
      241 ctggcccggg cacggttagt tgacctgtgt aaaaaacatt tttcaatttc ttattcctca
      301 tggatggttt caggatcgcg gtttgcttta aagtatttgc aagaccatat gcgtttcctt
      361 tgaaagcatg ataatcgttt acaaaatcgc tgtaagcgaa cgatctttta aatgcaatat
      421 ttccccttat cctttcgccg atgcgggcct catatctatc tacaatctta ttgaaaaagt
      481 attctctgcg ctcgtcagtg tcatcggcga ggccggcggc aacaggaata agaaagaaaa
      541 gattttcgtg ccctggcgga gcaagcgaat catcagtaca tgaagtagca cttacataaa
      601 acaatgggtt ggctggccat tgttttgtcg tataaatgtc ggatgcgtgc tcatcaaaag
      661 aagtgtcaaa gaacagggaa tgatgaacaa tatttcgaag ctttttattc aaccctacat
      721 aaaacagaat gcaaccaggt gccatcactc ttttgttcca gtatgcttca gaatagtttc
      781 tcgagttagc aggcaacaac ttgctttcta tatgatggta gtcggcgttt ccaatgatca
      841 catctgcctc gtaagcttcc tgtctgttgc catgagcacg tgcgatcact cttctcgcat
      901 tatcgttcgc aacctcgatt tgcaaaacct cgtggttgaa atgaaagtgg actccacatt
      961 caaccgccag ttgatacatg gcatcgacga cgctatacat tcctccctta ggaaaccatg
     1021 taccgccttt tatgtcagca taattcatga gtgtatatag cgcaggcatc ttttccgcaa
     1081 cagcaccgag aaacagaacg ggaaattcaa gcatctgccg gatcttcgga tttttgaaat
     1141 acttactgac atgttttttt acagacgtaa aaacatccag gcgtaaaatg cccatcaaca
     1201 gatcggcgtc gaagaattca gcacctgaca gcccgggttt gtaaaccaac ttttgcatgc
     1261 cggccttata cttataagca gcttcggtaa ggaatttgtc taattgatcg ctgctgccag
     1321 gctctaattt ttcaaagacg gtcttcagat cgttatagtc cgcaggtata tctgttgcat
     1381 cgtcctgcca ataaattctg taagaaggat cgaggcgcac aagatcatag tagtccgaaa
     1441 ctcttttgcc gaactgttga aaaaaccttt caaacacgtc tggcatccaa taccagctcg
     1501 ggcccatatc aaaagaaaac ccgcctgcct gcagttgtct tgctcttcca cctggctgtt
     1561 caagtttttc caggaccgta accttccagc ccgcctttgc catgaagcag gcagcagaaa
     1621 gaccggcgaa tccgcttcca attattacaa gatttttttc tctcactggt ggggctcaga
     1681 aacgctcaac ttgtgctctt agtaattttc ttgcaaaatg aatccggctt ttgatagtac
     1741 ccatcggctc attgagcatg tttgagatct ctttgtattt gaatccttcg aagtataaaa
     1801 caaacggcgc cttcaagatg ccgggtaatt ttgcaattgc tgcttgtatt tcttttatcc
     1861 ggatcgtgga aatcgccgta ttcgctgttg cagtttgtgg agaattgtac aacagatctt
     1921 cggcgctgta atccggtatg acgttacgtt tgactctttt cctgaaatcg ttgataaaca
     1981 cattccgcat gatgatgtac agccatgctt tgatattcgt tccaatgctg tatttatcac
     2041 tatgtgccag cgccctgaag atcgtctcct gtagtaaatc gctcgcatct tgcggatctt
     2101 gtgtaagcgt aatggcaaca ggttttaagt actcggcatt tttggttaac gcctgtgtaa
     2161 attcaggaac tggcataatc gatacatctt tgttataaat attaatagct cgccacgcga
     2221 acaccacaac aatttactgc aaaatgcagg caagggatta aagtatctaa acttttttat
     2281 taacgcacca ctttttcaac gcgcaagccg gcgtttaata cgttttgcaa gggatcttcc
     2341 cgcatgatct gctgtatggt aaatcgataa gtgcctggtt ggaggtgaag tggctgtttg
     2401 ttgatcaata gccgttgctc gattatatca tccatcgcag ttcccagcca gccgttattg
     2461 gcgttggcta attcaatatt aaaacgctgg gtgcgtggtt tctggtttgg aaaagcaaag
     2521 ttcaggttga tccagatatt gttgtaatgg tacgactctg tgtgccggat aacgaaataa
     2581 aaattgtaat aaccggtgct gtcttgtatg tcgaatgtaa agggtaaact gtttgaactc
     2641 tgccattcat gccgtggaag cggagctgtt ttttcataca catccagtgt ggtacatgca
     2701 tgtaacaaca tgatcagaag aacaacgacc gtgtatgttc tcaaggacat ttcctaaagc
     2761 acatttaata tttgttcttt ggctttctcc a
//
LOCUS       DASQJI010000705         1743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2863108,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000705 DASQJI010000000
VERSION     DASQJI010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2863108"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1283)
                     /locus_tag="VEV83_19010"
     CDS             complement(<1..1283)
                     /locus_tag="VEV83_19010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HYK47278.1"
                     /translation="MRRLFYFLSIAPQVFLFGACKSQPQSTAYAVARTTGLSDSALLD
                     TVEKQTFKYFWDGAEPNSGMGCERVHVDNHYPENDQHIVTTGGSGFGIMGLIAGIERG
                     YITRQQGLERFDKIVSFLEKADRFHGAWSHWIDGETGHVKPFGRVDNGGDLVETSFLM
                     QGLLCVRQYFKDGNEAEKNLAARIDTLWRQVEFDWYRHDRNVLYWHWSSDYGWQKNFP
                     VHGYNECLIMYVLAASSPTHGIPAEVYKEGWAENGLIKGLIIYDHDTLHLHHQGDPQH
                     GGPLFWAHYSYLGLDPHGLKDQYADYWKENTTQARINYNWCADNPEHFKGYGKNEWGL
                     TASYSIRGYAAHAPDEENDRGVISPTGALSSFPYTPAQSMAAMKHFYNDLGDKLWGPY
                     GFFDAFSETDNWYRPWYLAIDQGPEVVMIENYRSG"
     gene            complement(1334..>1743)
                     /locus_tag="VEV83_19015"
     CDS             complement(1334..>1743)
                     /locus_tag="VEV83_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HYK47279.1"
                     /translation="ANPGRFNGYSDSCWGLTASDDNLHTYSAHEPNNDDGVLTPTAAL
                     SSFPYTPGQSMAALQFFYYKLGDKLWNSYYGFKDAFNLTEPWFDTDFLAIDQMPIVVM
                     VENYRSSLVWNLFMSCPEVKKGMKKIGFQSPYL"
BASE COUNT          457 a          437 c          370 g          479 t
ORIGIN      
        1 aacccgctgc gataattttc gatcatcaca acttccggac cctggtctat ggcaagatac
       61 catggcctgt accagttatc tgtttcacta aaggcgtcga aaaagccgta cggcccccaa
      121 agtttgtcgc cgagatcatt atagaagtgt ttcatcgccg ccattgattg agcaggcgta
      181 tagggaaacg aagacaatgc gccggtcggt gagatcacac ctcggtcgtt ctcttcgtca
      241 ggtgcatgcg ctgcgtaacc tcttatagaa tagctcgccg ttaatcccca ttcatttttt
      301 ccgtagcctt taaaatgttc cggattatcg gcacaccaat tataattgat ccgcgcctgc
      361 gtagtatttt ctttccagta atctgcgtat tgatctttta ggccatgcgg atccagacct
      421 aaataagaat agtgcgccca gaacaaaggg ccgccgtgtt gtggatcgcc ctggtgatga
      481 agatgcagcg tgtcatgatc gtaaattatt aatcctttga tgaggccatt ttctgcccaa
      541 ccttctttgt atacttctgc aggtatacca tgcgttggcg aagacgcggc cagcacatac
      601 atgatcaaac attcattata accgtgaacc ggaaaatttt tttgccagcc gtaatcggaa
      661 ctccaatgcc agtacaaaac gttccggtca tggcgatacc aatcaaactc aacttgccgc
      721 cacagtgtat cgattcttgc tgctaaattc ttttcagctt catttccatc tttaaaatat
      781 tgtcgaacgc aaagcaagcc ctgcattaga aaagatgttt caacaaggtc gccgccattg
      841 tctactctgc caaacggttt tacgtgtccg gtttcaccat cgatccagtg cgaccatgcg
      901 ccgtgaaagc ggtccgcttt ttcaaggaac gaaacaattt tatcgaatcg ttccaaaccc
      961 tgctgccgcg taatatatcc tctttcaata cctgcgatca aacccatgat gccaaacccg
     1021 ctgccaccgg tagtaacgat atgctgatcg ttttcggggt aatggttgtc gacatgaact
     1081 ctttcgcaac ccattccgct atttggttcg gcgccgtccc agaaatattt gaaggtttgc
     1141 ttttcaactg tatccagcaa tgcagaatct gaaagaccgg ttgtacgtgc gactgcatac
     1201 gcggtcgatt gcggttgcga cttgcaggcg ccgaacaaaa atacttgcgg cgctatgctc
     1261 aaaaagtaaa acagtcggcg cacaaaccgc gggtaatttt gcacgaacag cataaggtct
     1321 cagcttgttt ctgttatagg taaggactct gaaaacctat ctttttcatt ccctttttca
     1381 cttcggggca gctcatgaat aaattccaaa caaggctgct gcgataattt tctaccatta
     1441 caacgatcgg catctggtcg atggcaagaa aatcagtatc gaaccacggt tctgtaagat
     1501 taaaggcatc tttgaaccca taataactgt tccataactt atcacccagt ttataataaa
     1561 agaactgcaa agctgccatc gattggcccg gtgtatacgg aaaagatgac agggctgctg
     1621 ttggtgttaa aaccccgtcg tcgttattcg gctcatgcgc cgaatacgta tgcagattat
     1681 catcgcttgc tgttaagccc cagcaggaat cactgtatcc attaaacctt cctggattgg
     1741 cga
//
LOCUS       DASQJI010000706         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1483144,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000706 DASQJI010000000
VERSION     DASQJI010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483144"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..1196
                     /locus_tag="VEV83_19020"
     CDS             264..1196
                     /locus_tag="VEV83_19020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47280.1"
                     /translation="MLALSIPTLTFSQSASAALDRDKILLGEQVTLQFNLNNLNPLTT
                     YVSTWPAPGDTMNHVEIVKRNDIDTVNVNGLNSYEQKFTLTGFDSGRWQLGPFNFVLQ
                     DKTTGKQINLSTQPLYLTVLPVDVSSLNDYHPIKDVIEVNTTFNWLPVIIVATLLIAG
                     VVIFIVLKKRKKRPTPEPEIVLKGTPFERAVEKLRELQDQPLNSVAEKRKFHSDVDII
                     CRQYFEEMLHVKALQATTSELFSRMNVYMQDQHLRSKMRQLFDLHASVKFAKYMPDAE
                     ESRAALKETIACLGSIEGYVQQSTQNADRLVPKY"
     gene            1168..2175
                     /locus_tag="VEV83_19025"
     CDS             1168..2175
                     /locus_tag="VEV83_19025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYK47281.1"
                     /translation="MLTDWYRNIEFAHSWVLGALLLLPVLIYEYIRRNNKQQASLLVT
                     TTHFVKGAGSVRTTLRHLPFILRCLAIICIVIALARPREKFTETQTGGEGIDIILCFD
                     ISGSMTEKDFEPDRLEASKRVAADFVRNRPGDEIGIVIFSNLSFTLCPLTTDHDAVLN
                     QIQNIESGYLQDEGTAIGSGLATSVDRLRSSKTKSKIIILLTDGVDFGGTIPPDIALQ
                     MAKYYNVKVYTIGVGSEKEVDEVVDSPLGPVVQHKKLQFNEPLLKRLAEQTGGQYFHA
                     TDNNALAKIYQSINQLEKSKIEVTSYNRFTDKYLPLLAAALVYLLLEIILRYTVFKKF
                     P"
BASE COUNT          662 a          497 c          517 g          594 t
ORIGIN      
        1 atcctgatga acacgaagag cagtgtaacg caatatcatt acaacaggca gtataaaaaa
       61 atacaggagg atgcaaagca aaattttcgg atggcgggcg cagacctcgt tcagctagcg
      121 accggggatg attatgtaaa ggcgttacag gaatttttta tgaaaagagc atgatggtga
      181 atgggcaatg gtcaatagtc aacggtgagt cgttaattaa tgcggtgctc ttaaatagaa
      241 aaactcttag cgtatttttt tgtttgcttg ccctttcaat tcccacgtta accttttctc
      301 aatcggcctc tgctgcgctt gacagagata agatcctgct cggtgaacag gtaacacttc
      361 agttcaatct aaataacctg aatcctctaa ctacgtatgt ctctacatgg ccggcaccgg
      421 gcgatacaat gaatcatgtg gagatcgtaa aacgcaacga catcgacacg gtgaatgtca
      481 atggcctcaa ttcctacgaa caaaaattta cacttaccgg tttcgattcc ggacggtggc
      541 aactcggtcc attcaatttt gttttgcagg acaagacaac gggtaaacaa ataaatcttt
      601 caacgcaacc gttgtatttg accgtcctcc ctgtggacgt ttcttcattg aacgactatc
      661 acccgataaa agacgttatt gaagtcaaca caacgttcaa ctggctgcct gtgatcatcg
      721 tagcgacttt gctcattgcc ggcgtcgtca tttttattgt gttgaaaaaa agaaagaaaa
      781 gacccacgcc cgagcccgag atcgttttga aaggaacacc ctttgagcgg gctgtagaaa
      841 aacttcgtga attgcaggat caaccgctca attccgtcgc tgaaaaaaga aaatttcatt
      901 cggacgttga tattatttgc cggcagtact ttgaagagat gcttcatgta aaggcgctgc
      961 aggcaacaac aagcgaatta ttttcgcgca tgaatgtgta catgcaggat cagcatctgc
     1021 ggtcgaagat gaggcagttg ttcgatctgc atgcttccgt aaaatttgcg aaatatatgc
     1081 ccgatgctga agaaagcagg gctgccttaa aagaaacgat agcgtgcctc ggctcaatcg
     1141 aaggatacgt acaacaatct acacagaatg ctgacagact ggtaccgaaa tattgaattt
     1201 gcacatagct gggttttggg tgctttgttg ttactgccgg tcctgatcta tgaatatatc
     1261 aggcgcaata acaagcaaca ggcctcgttg ctggtgacaa caactcattt cgttaaaggc
     1321 gcgggcagcg ttcgcaccac attgcggcac cttcctttta tacttcgttg cctcgctatt
     1381 atttgtattg tgattgcgct tgcgagacca cgggagaaat ttacagaaac acaaaccggc
     1441 ggcgaaggaa ttgatatcat cctgtgcttt gacatcagcg ggagcatgac tgaaaaagat
     1501 ttcgaacctg accgccttga ggcgtcaaaa cgcgtggcag cggattttgt gagaaatcgt
     1561 ccgggtgacg agatcggcat tgtcattttc agcaatctca gcttcaccct ttgtccgctt
     1621 actacagatc atgacgccgt tttgaaccag atacaaaata ttgaaagcgg ttatctgcag
     1681 gatgaaggca ctgccatcgg aagtggtctt gccacaagcg ttgaccggct acgcagcagt
     1741 aaaacgaaaa gcaaaataat tatcctgctc accgatgggg ttgattttgg cggaacgatc
     1801 ccgcctgata ttgcgctgca gatggccaaa tattacaacg tgaaagtgta cacgataggt
     1861 gtcggttctg aaaaggaagt ggacgaggtg gtagattctc cgcttggccc ggttgtgcag
     1921 cacaaaaaac tacaattcaa tgagccattg cttaaaagac tggcagaaca aaccggcgga
     1981 caatattttc atgcgaccga taataacgcg ctcgcgaaaa tttatcaaag catcaatcaa
     2041 cttgaaaaat caaaaattga agtaacgagc tacaaccggt ttacggataa atatttgccg
     2101 ttacttgccg ccgcgctggt gtacctgctc ctggaaataa tattacggta cacagttttc
     2161 aaaaaatttc cctagacttt tatttccgtt tcgctcatag ccttgttttc aatgtatgct
     2221 ttaaagcgca acaggtcatt ttcaaccata attttcaatg accggttgaa
//
LOCUS       DASQJI010000707         3813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1789717,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000707 DASQJI010000000
VERSION     DASQJI010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789717"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2085
                     /locus_tag="VEV83_19030"
     CDS             <1..2085
                     /locus_tag="VEV83_19030"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK47282.1"
                     /translation="DWQKLAFNYDAHTYSTNVSASGGTDKTKFYASANYDNQDGIVIG
                     NHFKRISGRLNLDQAVSDKFKLGFNLSLSQTNAARLPYDNEFSNPVQIVALSPITPVR
                     DENGELYNEPVTTYSNPLVDFENSHFNSISYRNIGAMYGQYNFTPSLFFRSEFGIDVL
                     NQNDDSYYGPETVNGAGINGYGESDWFKSLLYNTNNYLTYKKLFASKHDLDATVGMTY
                     EHYSDDYANVKGQDFPTEDLQKLASAGTITGGTSVSNEKAVVGYFGRVNYTFNDKYLL
                     YVSGRVDGSSVFGRNDKYGFFPAASAGWILSEEDFLKNSSLINFLKIRASYGISGNDD
                     LDYFIAQNTYGGVSYGGTSGLAPVDLGNNDLRWEKDQEFDIGVEFGLFHNRLSGELDY
                     YNRKTTDLLYDVLVPSNSGFTHQIKNIGSMQNTGVEIVLNSINLSTKDFRWTTSLNVT
                     FGDNKILNLNDKTKIVPSESSRYLNALVVGEGIGVFYGPKYAGVDPANGDALYYKADG
                     KTTTNNYNNAASFVVGDPNPDAFAGLTNTVSYKGIEFSFLFQGVFGNQVMNGGGVFMT
                     SSFDYFDNQTSDQLNRWQKPGDITNTPQLRLYGGNGIGASSRYVYDASYVRLKNITLS
                     YSLPATVTKRIGVNSLRVYVSGVNVLTFTDYPGWDPEVNTDYRSSNENQGGDFYSPPQ
                     IKNYSFGLNVTF"
     gene            2102..3448
                     /locus_tag="VEV83_19035"
     CDS             2102..3448
                     /locus_tag="VEV83_19035"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK47283.1"
                     /translation="MKNILYILIASCILAACDKKLDISPSDAIPGDQAFSTDENVKKA
                     LNGAYDAMTTDYLLNGDLQLYSELLGADGEITWTGTYGQPRQIFEKQILVNNDYVAST
                     WDNAYAAINICNNILDAIDVVKPEDQDRVKGEALFIRGEMYFELVRFFGKPYSAGDVN
                     TNLGVQIVTTPTKGSITEANYVPRSTVAETYDRVLNDLTEAESLLPEENGFYATKYAA
                     AAILSRVYLQMEDFAKARDEANTVIESGEYSLTSTYAEAFNNDENSSEDIFAVQVSEQ
                     DGSNDFNLFWSIPQYGGRSGDVDIEQKHLDLYEPDDARLALFYEDPHHVWRSGKWQQY
                     AKNIPIVRLGEMYVTRAECNFRLGTSVGATPFEDIETIRARSGLSTTQSYITLNNIIM
                     ERHLEIAHEGERIHDVKRLRQSVDGYDYDANELVLPIPINQIIIVGKDILKQNDGY"
     gene            3459..>3813
                     /locus_tag="VEV83_19040"
     CDS             3459..>3813
                     /locus_tag="VEV83_19040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47284.1"
                     /translation="MRKKIFHVSTAVLLCLHVFSQPKGNLFIIGGGSRSDELMNSLVS
                     TAQLRTNDYIVVLPMATTEPDTSFYYISEDLEKVCSNKIVNFNFTKRDVNKKAWLDST
                     EHAKLIFITGGDQTRF"
BASE COUNT         1156 a          821 c          877 g          959 t
ORIGIN      
        1 gattggcaaa agcttgcatt caattatgac gcgcacacgt attctacgaa tgtttcggca
       61 tccggaggca cagacaaaac aaaattttat gcgagtgcga attatgataa ccaggacgga
      121 atagtaatag gcaaccattt caaacgcatc tcaggaaggc taaatttaga ccaggccgta
      181 agcgataaat tcaaactggg tttcaactta agcctttcac aaacgaatgc ggcgcggctg
      241 ccttacgata atgaattttc aaacccggta cagatcgttg cattgtcccc catcacaccc
      301 gtaagggatg agaacggcga attatataat gagcctgtca ctacgtattc gaacccgttg
      361 gttgattttg agaacagcca ttttaattca atttcttacc ggaatatcgg cgcgatgtac
      421 ggacagtata atttcactcc gtcgctattt ttcagaagtg aatttggtat tgatgttttg
      481 aatcagaatg atgattcgta ctacgggcca gaaacagtga atggcgcagg catcaacggg
      541 tatggcgaat cagattggtt taagtcctta ttatataaca cgaataacta tctcacatat
      601 aaaaagctat tcgcaagcaa acatgatctt gacgcgacag tcggcatgac gtatgaacat
      661 tacagcgatg attacgcaaa tgtaaagggc caggatttcc ctacagaaga cctgcaaaag
      721 ttggcgagcg caggaacaat tacaggaggt acatcggtat caaatgaaaa agcggtcgtt
      781 ggctattttg gcagagttaa ctatacgttc aatgacaaat acctgttgta tgtcagcggc
      841 agggtggatg gatcttccgt ttttgggcgc aacgataaat acggtttttt cccggctgcc
      901 tctgcaggat ggatattatc ggaagaagat tttctcaaaa attcaagcct tatcaacttc
      961 ctgaagatac gagcaagcta tggcatttct ggtaacgatg atctggacta tttcatagca
     1021 caaaacacct acggcggagt ttcatatgga ggaacatcgg ggctggcccc ggttgacctc
     1081 ggcaacaacg acctgcgctg ggaaaaggac caggagtttg atattggcgt tgaatttggc
     1141 ctttttcata accggctcag cggcgaactc gattattaca atcggaagac caccgacctt
     1201 ttatatgatg tgctggtgcc ctcgaattcc ggttttacac accagataaa aaacattggc
     1261 tctatgcaaa acaccggcgt tgaaatagta ttgaactcga tcaacctttc aaccaaagat
     1321 ttcagatgga ccaccagcct caacgtcaca ttcggcgaca acaagatctt aaacctgaat
     1381 gacaaaacca aaattgttcc cagcgaaagc agccgctact taaatgcgct tgttgttggt
     1441 gaaggtatag gcgttttcta cggacctaag tacgccggcg tcgaccctgc gaatggtgat
     1501 gcgctatact acaaagcaga cggaaaaacg acaacgaata actataataa tgcggccagt
     1561 tttgtggttg gagatccaaa ccctgatgcg tttgccggcc tgacgaatac tgtttcttat
     1621 aaaggaattg agttcagttt tttattccag ggagtatttg gcaaccaggt tatgaatggc
     1681 ggcggcgtgt tcatgacctc gagctttgac tacttcgata atcaaacatc cgatcagctg
     1741 aaccgttggc aaaagccggg cgatatcacg aatacacccc agttgagatt gtatggaggc
     1801 aacggcattg gagcgtccag ccgctatgta tatgacgcca gctatgtaag attaaaaaac
     1861 ataacgctca gctattcgct ccctgctacc gttacgaaac gcatcggcgt aaactctttg
     1921 cgcgtttatg tttcaggagt caacgtcctt acgttcacag attatccggg ttgggaccct
     1981 gaagtaaata cagattaccg gtcaagtaac gaaaaccagg gcggtgattt ttattcgccg
     2041 ccacaaatca aaaattattc gttcggatta aacgtcacct tctaaaagca aaaagaaaaa
     2101 aatgaaaaac atattatata tactgatagc aagctgcatc ctggctgcat gtgataagaa
     2161 actcgatatt tctccaagcg atgcgatacc cggagaccag gcattttcaa cagatgaaaa
     2221 tgtaaaaaag gcattgaatg gcgcctacga tgccatgacg acggactatc tcttaaatgg
     2281 tgacttgcaa ctgtattcag agctcctggg ggccgacggt gaaataacgt ggaccggcac
     2341 ttacggacaa ccacggcaga tctttgaaaa acagatttta gtcaacaacg attatgtagc
     2401 ctccacatgg gataatgctt acgccgcgat caatatttgc aacaacattc tcgatgcgat
     2461 agatgtggta aaacctgaag accaggacag ggtaaagggc gaagctttat tcattcgggg
     2521 agaaatgtat tttgagttag tcagattttt cggcaagcct tacagtgccg gggacgtaaa
     2581 tacaaatttg ggcgtgcaaa ttgtgaccac cccaacaaaa ggcagcatta ctgaggcgaa
     2641 ttatgtgccg cgcagcaccg tcgcggaaac ttacgatcgt gttttgaatg atcttaccga
     2701 agccgaatca ttgctaccgg aggagaatgg tttctacgca acgaaatacg ccgctgccgc
     2761 tattctttca cgtgtgtatt tgcaaatgga agatttcgca aaagcgcgcg acgaagcgaa
     2821 tacggttatc gaaagtggtg aatactcgct cacatcgacg tacgcagagg ctttcaataa
     2881 cgatgaaaat tcttccgaag atatttttgc ggtacaggtg agtgagcaag acggctcaaa
     2941 tgatttcaat ctattttggt caatacccca atatggaggc cgttcgggcg atgtcgatat
     3001 tgaacaaaaa caccttgacc tgtatgaacc tgacgatgca cgcctggcgc tcttttacga
     3061 ggatccgcac catgtttggc gcagtggtaa atggcagcaa tatgcaaaga atattccaat
     3121 cgtcaggctt ggcgaaatgt acgtaacaag agcggaatgc aacttccggc tcggaacatc
     3181 ggtgggtgcc accccatttg aagatattga aacgatcaga gcccgttccg gactttccac
     3241 tacacaatca tatattacgc tgaacaatat tataatggag aggcatcttg agatcgcgca
     3301 tgagggcgaa cgtattcacg atgtaaaaag gctgagacaa tctgtggatg gttacgatta
     3361 tgatgcaaac gaactggtac tccctattcc gattaaccag atcattatcg taggaaagga
     3421 catattaaaa cagaacgacg ggtactaaaa actactcgat gagaaagaaa attttccatg
     3481 taagcacagc ggtattgctg tgcttacatg ttttcagcca accgaaaggc aatttgttta
     3541 tcataggcgg cggctcacga tcagatgagt taatgaattc tttagtgagc acagcgcagt
     3601 tgcgcaccaa tgattatatt gttgttcttc caatggctac gacagaaccg gatacttcat
     3661 tttattacat ttcggaagac ctcgaaaaag tgtgcagcaa caagatcgtg aacttcaatt
     3721 ttacgaagcg tgatgtcaac aaaaaagcgt ggctcgactc caccgaacac gcaaaattaa
     3781 ttttcatcac aggaggggat caaacccgtt tca
//
LOCUS       DASQJI010000708         4290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_713426,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000708 DASQJI010000000
VERSION     DASQJI010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713426"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3402
                     /locus_tag="VEV83_19045"
     CDS             <1..3402
                     /locus_tag="VEV83_19045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47285.1"
                     /translation="NTTNITGAPASGSGSSIPSYNLVNKTTSIQTTVFTITATSPGGC
                     TSTTTATVQVNPNIENNNIYLVSECFVPADSAQIVIAQQGAPVTGGDGNYVYYWGFCP
                     NGNSCNPPFYKTNLSIDTTTTSSLLYTQGGGITHNGFYDRTIYSGGCRDSISASNLTV
                     HVNFKNVIAAAFDTLRGGGPYCNGGAGVDVWISSSFAPALSVYINYELYRNGAPMSPP
                     VIKTGDGDSLTFGKQTLAGTYTVWATVGVVGGTTCTPFQLKNSVTVTIDPNVSPTPNA
                     GPTQNLCLPAGNSTTSTTMAANAAVVGSAAWTKISGSGTITSTASPTTTITGLTAGTS
                     IFKWKFTSGTCADSSYDTINVNIENVAASAVNATKNPICVGDNDDLTQTGGSLGTGAV
                     WKWYSDASYTTLVGSTSAANALITVNPTVTTTYYLRAEGAISPCVANVGGPSKTIVVN
                     QRPTAVWGGSQTLCSGTADLSITFTGTAPWTFNYSTDNCTTTTTVTTSANPYIFTVAP
                     TVTTTYVLCSLKDANCTSVPGDYNGSSATVTVLAGTPGLWVGGTAGDPNNWFNCQNWA
                     SGYVPNINTNVTIPNGTPQCQINAAGAVCASLTVNGSSLSFTTASAYLTDAGDVKING
                     GFITMAGGGTLELQGNWDNEVGAAGFTAPVGKVVFSGATSPATIISAAPVETFYDLEL
                     NKTNTTDRVHLNKSLVTSHDLTLTRGIFVTENNLFTWNNTGTLTAPELTYTANSLNYT
                     KSFIATCDASGVPITVASDINPFGGNAGFQIKNVTGAPTYFPVGASYLPAGTNITIPA
                     PNRMMIDKTSATPRDFTVVVNYGDIGYTHGINGAWRVNRIWYVAAGNSATADSATMVL
                     FFTKRDWSSWMIGENEVEAGFDYSQPALVQKDYSGGFGNFINLSDGGDLNNFLSNAYN
                     TEIYGVYTINISTSLTNGIQQFNRFSVVNRGDIVLPVTITSIKAWQDGSAVKVGWTCQ
                     QEVNIDHYEVEKAVDAQHFTYLGSVPAKNSGLTSDYLLTDNYPAAGNNYYRIKVVDKN
                     GSVSYTSVVMVNIGKGIARIFLYPNPALKRIFNLQMNNVNAGKYKLMAYDAAGRVVIS
                     KDVEHFGGSSTQQIILPAGIASGAYRVVLLSNEKAIFSTTLIVAE"
     gene            3676..>4290
                     /locus_tag="VEV83_19050"
     CDS             3676..>4290
                     /locus_tag="VEV83_19050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47286.1"
                     /translation="MRTLTGFALMLFACAAAVQTQIELSTISPITLRNPDQGTNALSL
                     IRRSTPLASATWMGVTSTDWHTSSNWDVGAVPLLSTAVTIPAGTTYNPSISTADASVA
                     SVIISSGATLSIAGAFNLNIENGGSFTSNGTFNGASSTIIFSGAGTINGSSQPTFNNI
                     TINGNLTVSTTPTINGNFTINNGTVSAAPIYGSSSTLIYNTSAAT"
BASE COUNT         1218 a         1004 c         1003 g         1065 t
ORIGIN      
        1 aatacgacga atattaccgg agctccggca agcggcagcg gctcttcgat accgtcatat
       61 aatttggtaa ataaaacaac gagtatacaa accacggttt tcactattac agccacatca
      121 ccgggcggtt gcacttccac aacaaccgca acggtgcagg tgaatcctaa cattgaaaac
      181 aataacatct atttagtatc cgagtgtttt gtgccggcag attcggcaca aatagttatc
      241 gcgcagcagg gagcgcctgt tacaggtgga gatggaaatt acgtttatta ttggggcttt
      301 tgtcctaacg gcaatagctg caacccgccg ttctataaga caaacctgtc aattgatacg
      361 accaccacct ccagcctttt atatacacaa gggggtggca ttacgcacaa tggtttttat
      421 gaccggacaa tatactcggg gggatgccgg gattcaatta gtgctagtaa tctaactgtg
      481 catgtgaact ttaagaatgt gatcgcagcg gcttttgata cgttacgtgg aggtggccct
      541 tattgtaacg gaggtgcggg tgtagatgta tggatatcat cctctttcgc cccggcactt
      601 agcgtgtata ttaattatga actctaccga aacggggcac cgatgtcccc tcccgttatc
      661 aagaccgggg acggcgacag ccttactttt ggtaaacaaa cactggcggg aacatatacc
      721 gtttgggcaa cggtaggagt agttggggga acaacgtgta cgccattcca actgaagaat
      781 agtgtgacgg taaccatcga tcctaatgtt tctccaactc caaatgccgg cccgacacaa
      841 aatttatgtc ttcctgcagg caattccaca acaagtacta cgatggctgc aaacgccgcc
      901 gttgtcggta gtgcggcatg gacgaaaatt agtggcagcg gaacaataac atcaaccgca
      961 agtcccacca ctacaataac tgggcttaca gcgggcacca gtatattcaa gtggaaattt
     1021 acaagcggca catgcgctga ttcctcatac gataccatta atgtgaacat cgaaaatgtt
     1081 gcagcttctg cggtaaatgc tacaaaaaat ccgatttgtg tcggcgacaa tgatgacctt
     1141 acacaaaccg gtggaagcct gggaacgggg gctgtgtgga aatggtattc tgatgcgagc
     1201 tatacaacgt tggtaggatc aacctcggcg gccaatgcgc tgataaccgt taatcctacc
     1261 gttacaacga catactattt gagggctgaa ggagccatat cgccgtgtgt ggccaatgtc
     1321 ggcggcccaa gcaaaacgat tgttgtgaat cagcggccga cggccgtttg gggcggaagt
     1381 caaacgctct gcagcggcac tgctgatctg agtataacct ttacaggtac ggcaccgtgg
     1441 acgttcaatt atagtaccga caattgtacg acaacaacaa cggtcactac gtccgcaaat
     1501 ccatacatat tcaccgttgc gccaacggtt acaacgacat atgtactttg ctcgttaaag
     1561 gatgcaaact gtacctcagt tcccggtgat tataatggta gcagcgcaac ggtaactgtt
     1621 cttgcaggta cgcccggctt atgggtagga ggcacagcgg gcgatccaaa taactggttc
     1681 aattgccaaa attgggcaag tgggtatgtg ccgaatataa acacaaatgt taccatcccg
     1741 aacggaacgc ctcaatgcca gatcaacgct gctggggcag tatgcgcaag cctgactgta
     1801 aatggaagtt cattatcgtt tacaacagcc agtgcttatc tcacggatgc cggagatgtg
     1861 aagatcaacg gcggcttcat taccatggcc ggaggtggca cacttgaact gcagggtaac
     1921 tgggataacg aggttggggc tgctggtttt acggcacctg ttgggaaagt agtcttcagc
     1981 ggagcaacaa gcccggcaac aatcatatca gcggcgcccg tggaaacatt ttatgatctg
     2041 gagctgaata agacaaatac gactgaccgg gttcatctta ataaaagcct tgtaacaagt
     2101 catgacctta cgctcacacg aggaattttc gtaactgaaa ataacctgtt cacatggaat
     2161 aacactggaa cattaaccgc gccagaacta acatacaccg cgaattcgct taattacaca
     2221 aagagcttta ttgccacttg tgatgcctct ggtgtgccta taaccgtagc aagcgatatt
     2281 aacccgtttg gcggcaacgc aggctttcaa attaagaatg tcaccggcgc accgacatac
     2341 tttccggttg gagcgagtta tctgcccgcg ggtaccaata taacgatacc tgcaccaaac
     2401 cggatgatga tagataaaac gtcggccact ccgcgcgact tcaccgttgt cgtaaactat
     2461 ggtgatattg gttatacaca cggaataaac ggtgcgtgga gagtgaaccg tatatggtac
     2521 gtcgccgccg gaaattctgc aacggcagat tcggcaacga tggttttatt cttcaccaaa
     2581 cgcgattggt catcgtggat gataggtgag aatgaggttg aggccggctt tgattattcc
     2641 caaccagctc ttgttcaaaa agattattcg ggcggatttg ggaattttat aaacctgtca
     2701 gacggcggag atctgaataa ctttttgtct aacgcataca acacagaaat atacggtgta
     2761 tacaccatca atatcagcac gagccttacc aatggcattc agcagttcaa tcgtttttca
     2821 gtggtgaaca gaggtgatat cgttcttcct gtaacgatca ccagcatcaa agcatggcaa
     2881 gatggatccg cagtgaaagt tggttggacg tgccagcagg aagtaaacat cgaccattac
     2941 gaagttgaaa aagcggtgga tgcacaacac ttcacttacc tgggaagtgt tcccgcgaag
     3001 aacagcggat tgacttcgga ctatttgctg actgataatt atcctgcagc gggcaataat
     3061 tattatcgca ttaaggtggt cgataaaaac ggaagtgtaa gttatacttc tgtggtgatg
     3121 gtaaatattg gaaagggtat tgcaagaata ttcctctatc cgaatcctgc gttgaagcgc
     3181 atcttcaatt tgcagatgaa caatgtgaat gccggaaaat acaaattgat ggcatatgat
     3241 gccgcaggca gggttgtaat tagcaaagat gttgaacact tcggaggctc atctacacaa
     3301 cagatcatat tacccgcagg tatcgcaagc ggtgcataca gagtggtgct gctcagcaat
     3361 gaaaaagcga tctttagtac cacattaata gtagctgaat aaggtgtctg ttcatcccgg
     3421 ctgcggtcgg gatgactgac gcatttggtt gctctgaatt ctaattttgc ctcattattt
     3481 tactcggcca tgtttctttc aatcctgggc cgcctgagca taataaacaa ctgcaaaaaa
     3541 aataatttcc ctgtcatttt taaattcaac aaataatata actttattcc acaccctgga
     3601 ccggaattaa tacctgactg gcttccaacg ctctgactgt tcaagtaact ttttcaactc
     3661 attcaacctt ttaccatgag aaccctaact ggttttgcgc tcatgctttt tgcatgtgcc
     3721 gccgccgtgc aaactcaaat agaattatca acgatctccc cgatcacact ccgcaatcct
     3781 gatcagggaa caaatgctct gtcactgata agaagatcaa caccgttggc ttccgcaaca
     3841 tggatgggtg taacgagcac tgactggcac accagcagca actgggacgt tggtgccgtg
     3901 cctctcttat ccacagcagt tacaatccca gcaggcacca cttacaatcc gtccatctca
     3961 acggctgatg cgagcgttgc ttctgttatt attagttccg gagcgacgct ttccatagcc
     4021 ggagctttca atctcaatat tgaaaacggt ggaagtttta caagcaacgg aaccttcaat
     4081 ggagcgagca gcacaataat attttctggc gcaggcacaa taaatggcag ctcgcaacct
     4141 acgttcaata atatcaccat aaatgggaac ttaaccgttt ccaccacgcc aacgatcaat
     4201 gggaatttta cgatcaacaa cggtacagta tcggctgcgc cgatttacgg aagcagctca
     4261 actcttattt ataatacatc ggctgcaact
//
LOCUS       DASQJI010000709         1849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2403890,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000709 DASQJI010000000
VERSION     DASQJI010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2403890"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(311..1822)
                     /locus_tag="VEV83_19055"
     CDS             complement(311..1822)
                     /locus_tag="VEV83_19055"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47287.1"
                     /translation="MKHLLLAIFCFSFSATISAQKVDTVLEEQWKNNAWQNATRIITD
                     YNADCQPGTVLVQSWNPTLGQWENSVRTNYTYTGGTYVSQAVSQIWDKNSSSWKNVSR
                     ITYTYNASFQVTVTLTELYSGGAWQNATRVTNTYDGNGYLTTSLSEVWFITQWQNATR
                     VNYTNNSDGTPQQVVYQTWNVLTQNWDNSARDTYTYNGDKTVHQVVHEVWVSGAWQND
                     TRTTYTYDASKRTLTVLVEKWNGSNWVNDELTTNTYNGNDLVKTVDQSWDNASSSWEN
                     VSQTTFTYNGDGTVHQAVNQTWNKNTSAWENKTRVTFSYNADCALPLKLLSFDATRSN
                     NTVSLTWQTADEINTSHFTVQRSLDAISFSSIGNVTAKGTSTAINSYGFTDDVTTIKS
                     SKIYYRLQMVDNDGRFTYSNTALVALLSNGNFVLVYPNPVKDQLFVVTNSAISKADVR
                     ITDQTGKLVYQQHFDNVEGGAVNKINVAGLAKGVYYLQFTNGSDKQTTKFIKQ"
BASE COUNT          462 a          392 c          391 g          604 t
ORIGIN      
        1 tcagctgact ggtgcataaa ttctttccaa tacattctga aattctccgg gcgtgtaaac
       61 atgcccctga tcatcaaaag ataccgacca atatgcgtga ggagtttcga catttatagg
      121 tgcaatatta ggagtttccc ggaagcaatc cttctagtgc cacaatgttt attcagtcaa
      181 atgcttttcg cggtcagcga aggggagaga ccttgctgcg acaacatgtt tttgcaaccg
      241 tgatctagtt ccgaaaaaaa acctgcgggc tttaatgccc gcaggttttc acagttgctt
      301 ttggctatcg ttattgtttg atgaatttag ttgtttgctt atcagagccg tttgtgaatt
      361 gcaaataata aacgccttta gcaagaccgg caacatttat tttatttact gctccacctt
      421 ctacgttgtc aaagtgctgc tggtaaacca gcttgcccgt ttgatccgtg atccgtacat
      481 cggctttgct aatcgcgctg ttcgttacaa caaacaattg atctttcacc ggattcggat
      541 agacaagaac aaaatttcca ttcgacaaaa gagcaacgag tgcagtattt gaataagtaa
      601 accggccatc gttgtctacc atttgcaggc gataataaat tttgctggat ttaatggtcg
      661 ttacgtcatc ggtaaaacca taactgttta ttgcggtact cgttcccttt gccgttacgt
      721 tgccaatgct actgaagctt attgcatcaa gacttcgttg cactgtaaaa tgagatgtat
      781 ttatctcatc ggccgtttgc caggtgagcg atactgtatt gttgcttctt gttgcatcaa
      841 agcttaacaa tttgagcggt aatgcacaat cggcgttata ggaaaatgtg acccgggttt
      901 tattttccca cgcactcgta tttttattcc aggtttgatt tactgcctga tgaacggtgc
      961 catcgccgtt ataagtaaag gtggtttgcg aaacattctc ccagctgctg ctcgcgttat
     1021 cccatgactg atctacggtt ttaacaagat cattgccatt gtatgtattg gtagtgagct
     1081 catcatttac ccagtttgaa ccgttccatt tttccacaag aacagtgagt gttcttttag
     1141 atgcatcgta tgtataagtg gtccgtgtat cattttgcca ggcaccggag acccatactt
     1201 catgtaccac ctggtgcaca gtcttatcac cattataggt atatgtatcc cgcgcactgt
     1261 tatcccagtt ttgagttaga acattccagg tttgatacac tacctgttgt ggtgtgccgt
     1321 cgctgttatt tgtataattg acccgtgtgg cgttttgcca ttgagttatg aaccagacct
     1381 ccgataaact cgtggtaagg tatccgttac cgtcgtaagt atttgttaca cgggtagcat
     1441 tttgccatgc accgcccgaa tataattcgg tcaaagtaac tgttacctgg aacgacgcgt
     1501 tgtaagtata tgttatcctg gatacatttt tccagctact gctgtttttg tcccagattt
     1561 gcgagacagc ctggcttacg taagtgccgc ctgtgtatgt gtaatttgtg cggacagaat
     1621 tttcccattg ccctaaagtt ggattccaac tctgaactaa aactgttcca ggctggcaat
     1681 cggcattata atcagtaatg atcctggtag cattttgcca ggcattattt ttccattgct
     1741 cctccagaac tgtgtcaact ttttgtgcag agatcgttgc tgaaaatgaa aagcaaaaga
     1801 ttgcgagtaa taaatgtttc atggttaatt tttttgtcag ttatgtaat
//
LOCUS       DASQJI010000710         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1021000,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000710 DASQJI010000000
VERSION     DASQJI010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1021000"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VEV83_19060"
     CDS             <1..224
                     /locus_tag="VEV83_19060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HYK47288.1"
                     /translation="PTQIHLQLNDVAHTFLQGHRIMIQIQSSWFPLVDRNPQKFINIP
                     DAKDSDFQKATIKIYHDATHPSNIEVGME"
     gene            330..776
                     /locus_tag="VEV83_19065"
     CDS             330..776
                     /locus_tag="VEV83_19065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47289.1"
                     /translation="MKYPIIFTLALFSICSSSVDAQSSWKSFKQHGYYIELPDYFLPV
                     ASQDPAVDVFVNSNNREILLRIENSSSDQLNFNSKYLTEIANTGVTSKVIKDSVYTVS
                     YGDGNTINYHKSFLSNGQLHSLIVSYPNKEKTQFDLILQRIGRSFK"
     gene            784..1734
                     /locus_tag="VEV83_19070"
     CDS             784..1734
                     /locus_tag="VEV83_19070"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK47290.1"
                     /translation="MRTPLLFLSFFFFTHLEAQTFPNSLTDGKFVTVNGAKLWVVIVG
                     KGDPLFIIPGGPGSAHLSYRRFDSLASSNMLVYFDAFGRGKSDTAKDVKEYSLQRDID
                     DIEGLRQALHFDMINVLGHSYGGLVAQGYAVQYGSHLKHLVLANTFHSFVMWQENDDN
                     SNHEIRTNYPEVWDTLMKIREQGYISSDPLHQEIYGRVPYGFLYAYNPENFRSRGAAP
                     YPNSFNPKVYYQMVGKDGDFIVGSDIGNFDYRKDLKDLKMPVLIYGGRYDRVAVPEMM
                     VKYKEYCPQAKFLMFEHSGHNPQVEEPQKLFALLNDFLGH"
     gene            1816..>2093
                     /locus_tag="VEV83_19075"
     CDS             1816..>2093
                     /locus_tag="VEV83_19075"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47291.1"
                     /translation="MDQTTNALNWFEIPVTDMGRAKHFYQVAFGVHLEDMNMPGMEMA
                     AFPLDMGNGKVSGALAKSDYHKPSADGVTIYLNANPDMTDVLQRIESEG"
BASE COUNT          605 a          443 c          471 g          574 t
ORIGIN      
        1 agccgacgca aatacatttg cagttgaacg acgtggcgca tacgtttctt caggggcacc
       61 ggatcatgat acaaattcaa agcagttggt ttccgcttgt cgacaggaac cctcagaagt
      121 tcatcaacat cccggatgct aaagacagcg atttccaaaa agctactata aaaatttatc
      181 atgacgcaac ccatccgtcg aatattgaag tggggatgga gtaggaagta ggaattggga
      241 attatgattt gggatttgcg tagatttttt aaacttgcaa aacttttttc tcgcagtaac
      301 gttattgaat attttaaaac aattgatcta tgaagtaccc gattattttc acccttgcat
      361 tgttttcaat ttgctcatct tccgttgacg cacaaagtag ctggaaatct tttaaacagc
      421 atggctatta tattgagtta ccggattatt ttctgcctgt ggcctcacag gatccggccg
      481 ttgacgtttt tgtgaattcc aataaccggg agatcctcct tcgcatcgaa aattcgagtt
      541 ccgaccaatt aaattttaac agcaaatact taactgagat cgcgaacacc ggtgtcacgt
      601 ctaaagtgat caaagattcc gtttataccg taagctacgg agacggcaat acgatcaatt
      661 accataaaag ttttcttagt aacggacagc ttcattcgct gatagtgtcg tatccaaaca
      721 aagaaaaaac ccagttcgac cttattctgc agcgaattgg aagatcgttt aaatgaccgt
      781 tttatgagaa caccactgct atttctatca ttttttttct ttacacatct tgaagcgcaa
      841 acatttccaa acagcctcac cgatggcaaa ttcgtcaccg taaacggagc aaagctatgg
      901 gtggtgatcg ttggcaaagg cgacccgttg tttattattc cgggcggccc tggcagcgca
      961 catttaagct acaggcgctt cgattcgctg gcatcaagca atatgcttgt ttattttgat
     1021 gcgttcggcc gaggcaaaag cgacaccgcg aaagatgtga aggaatattc gctgcagcgg
     1081 gacatcgacg atattgaagg tttgcggcag gcattgcatt tcgatatgat caatgtgttg
     1141 gggcattctt acggcggatt ggtagcgcag ggatatgctg tgcagtatgg ttcacaccta
     1201 aaacaccttg tactcgcaaa tacctttcac agcttcgtga tgtggcagga aaacgatgat
     1261 aatagtaatc acgagatcag gaccaattat cctgaagtat gggataccct catgaagatc
     1321 cgcgaacagg gttatatatc cagcgatccg ctacaccagg aaatctacgg acgtgttccg
     1381 tatggcttct tatatgcata caacccggaa aatttcagat cgagaggagc ggctccttat
     1441 ccgaactctt tcaatccaaa agtgtattac caaatggtgg gcaaggatgg cgattttatt
     1501 gttgggagtg atatcggcaa tttcgattat cgtaaagatc tcaaagacct gaaaatgccg
     1561 gtgcttattt acggtggcag gtacgaccgg gttgccgttc cggagatgat ggtaaaatat
     1621 aaagagtatt gtccgcaagc aaagtttctc atgttcgaac actccggcca taacccgcaa
     1681 gtggaagaac cacaaaaatt atttgcactg ctgaatgact ttctcggtca ttagcctgca
     1741 aaaattttat gttaccattc ttcaaacagt cgacgttagg aaaacagata ttgtagcttg
     1801 cagtaaaatt tttttatgga tcagactaca aatgccctta actggtttga gataccggtt
     1861 accgatatgg gccgcgcaaa acatttttac caggtcgcat tcggcgttca cctggaagac
     1921 atgaatatgc cgggtatgga aatggcagct ttccctttgg acatgggaaa cgggaaagta
     1981 tctggtgcgc tcgccaagag cgactatcac aagccatccg cagacggtgt aacaatctat
     2041 ctgaacgcga atccggatat gaccgatgta ttgcaacgaa tagaatctga agg
//
LOCUS       DASQJI010000711         3793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_869007,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000711 DASQJI010000000
VERSION     DASQJI010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_869007"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="VEV83_19080"
     CDS             complement(<1..1046)
                     /locus_tag="VEV83_19080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /protein_id="HYK47292.1"
                     /translation="MYDIIQLNDMLVPELHDIAEHLSIPDAKRLNKQELIYKILDKQA
                     LTPAASSNGSDKPKRKRIVKASTANSTEEAEVMTEAPKVERPRKETKHPVREKAEPEE
                     KPKRITKTKVKSKEEEPAPVAAEAGQGSEPIEDESLTKIGANLLSLLGDDEPVIFPDD
                     NDTETAEPSAKPWNRKEPAFNIEFDGIIQAEGVLEMMPDGYGFLRSSDYNYLSSPDDI
                     YVSPSQIKLFGLKTGDTVYGAVRPPKEGEKYFALLKVETINSKSPDEVRDRVPFDYLT
                     PLFPFEKLNLFSAASDYSTRIMDLFTPIGKGQRGLIVSQPKTGKTMLLKAVANAIAAN
                     HPECYLMVVLVDERP"
     gene            1370..2410
                     /locus_tag="VEV83_19085"
     CDS             1370..2410
                     /locus_tag="VEV83_19085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47293.1"
                     /translation="MKPVWITKRWVTVLLHAVCWLVMFSLPFLLRTQYNKTEHRAPQP
                     DDEVLSYFYIVSSVFWIALFYLNAYTLVPAFLHKRVWRFVALHLLALTTIFFLHWLYF
                     ALFVTHVPFKPLGFFGYNIFPYMFILASSTAYAMLIERQRAVKLSRLRETENLKTELL
                     FLRSQVSPHFMFNVLNNMVALARKKSDLLEPSLLKLSSLMRYMLYETDEQRVPLEREI
                     EYLQSYIDLQQQRFGKNVKVNVSIRGVNCSHEIEPMLLIPFVENAFKHGTGIIECAQI
                     NIDLKETNGMLQFIVSNKYNDNVNGAKDKSSGIGLNNVQRRLNLLYGNNHTLLINKEN
                     GWFTVSLQINLH"
     gene            2410..3117
                     /locus_tag="VEV83_19090"
     CDS             2410..3117
                     /locus_tag="VEV83_19090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47294.1"
                     /translation="MLRCLAIDDEPLALELLEDNISKVPFLELVASCSNPLEAMKVLQ
                     NESIDLIFLDIQMPGLTGLQFIQSITEKPMFILITAYEKYALEGFNLDVVDYLVKPVS
                     LDRFIKACHKAHELHQLKSGKEKGEGNSASYFFINVDYSLVKVVFSDIMWIEGFKDYL
                     KIHLKSTSKPIVARLTMKSIEEQLPASMFIRVQKSFIVSKEHITAVRKNSVFINDIEI
                     PVGDNYKDAITALTGKH"
     gene            3142..>3793
                     /locus_tag="VEV83_19095"
     CDS             3142..>3793
                     /locus_tag="VEV83_19095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47295.1"
                     /translation="MKVKAFLFAIAFFFAAIQLQAQQPVDGIIAAYFEAIGGADKIAQ
                     INSIYIEGNLQMMGSQSPMKVTILNGKGYKTEMNFGGSDVVQTITDNGGWMINPFMGS
                     PEPVPLPNEQYVALKQQIHIGGPLFKYSTNGYRVNFAGMDVLDGKAEYKVDAVSPDSV
                     KNTFYIDSVTDYVDQLSINNAGQTITVKYSNYKKTDFGNLMPFKEQIISPEGSVDIT"
BASE COUNT         1054 a          806 c          832 g         1101 t
ORIGIN      
        1 gggcgttcat caaccaacac gaccatcaaa tagcattcgg ggtggttggc agcaatggca
       61 tttgccacag ctttcagcaa cattgttttt cctgttttcg gctgagacac tatcaagcca
      121 cgctgtccct taccaattgg cgtgaacagg tccatgatac gtgttgaata atcactggca
      181 gctgaaaaaa gattcaactt ttcaaaggga aacaaaggcg ttaggtaatc aaaaggtacg
      241 cggtctctaa cttcatcagg gctttttgaa ttgatcgttt ctaccttcaa caaagcaaaa
      301 tatttttcac cctcttttgg agggcgcaca gcaccatata ccgtatcgcc ggtctttaat
      361 ccaaataact ttatctgcga tggggatacg taaatatcat caggtgaaga gaggtagtta
      421 taatcgctgc tgcgcagaaa accatagcca tcaggcatca tttccaaaac accttctgcc
      481 tggatgatcc catcaaattc tatattgaaa gcaggctctt tacggttcca tggcttcgca
      541 gagggctcgg cagtttcagt gtcattgtca tccggaaaaa taacaggttc atcgtcacca
      601 agcaggctta aaagattcgc tccgatcttc gtcaatgact cgtcttcaat aggttcagaa
      661 ccttgtcctg cctccgcagc cacaggtgca ggttcttctt ctttactttt tactttcgtt
      721 tttgtgatcc gttttggttt ttcttcaggc tctgcctttt cacgcacagg atgtttcgtt
      781 tcttttcgcg gtctttcaac ctttggcgct tcagtcatca cttcggcttc ttcggtgctg
      841 ttggcagtgc ttgcttttac gatgcgtttg cgcttaggtt tgtctgaacc attggaagat
      901 gcggccgggg ttaaggcctg cttatcgagg atcttataaa taagttcctg tttgttaagc
      961 cgttttgcat cgggtatgct caggtgctca gcgatatcgt gaagttcagg caccagcatg
     1021 tcgttcaatt ggataatgtc gtacataaat aattgtgatc cttaagaata aaattccaaa
     1081 aattgttgga agaaaatttt gttggttaat gagaaaacag gcgagtatga tttcgaactt
     1141 gggctattta tgcttgtttc cggctgcaat gttacagcaa aaaatgtaaa aacaaagaaa
     1201 attttcacgg cggatcaggc gccaggaata gatatccgga ctttttttcg gctggttatt
     1261 taatcgtttg cggcgatcgc cgacttgttt aatctctaga taccgtgctt tcgtcgcaat
     1321 gttttaataa tcgcctttct ttagctgatt tcttaggtac tttgaaataa tgaaaccggt
     1381 ttggataacg aagagatggg taacggtatt gttgcatgca gtatgctggc tggtgatgtt
     1441 ttctcttcca tttctattgc gtacacaata taacaagaca gaacacagag caccgcagcc
     1501 cgacgatgag gtcctgtcct atttctatat cgtcagcagt gttttttgga tcgcgttatt
     1561 ctacctgaac gcttatacac tcgtgcctgc gttcctgcat aaaagggttt ggcggtttgt
     1621 tgcacttcat ctcctggcgc tgaccactat ttttttcctg cattggttat attttgcttt
     1681 gttcgtaacg catgttccct ttaaaccact gggatttttc ggatacaaca tttttcccta
     1741 catgtttata ctggcgagca gtactgctta cgccatgttg atcgaacggc agcgtgcggt
     1801 gaagctttcg cgcctccggg agactgaaaa tttgaaaaca gagttgttgt ttttgagatc
     1861 gcaggtcagc ccgcatttca tgttcaatgt actgaataac atggtggcat tagcaaggaa
     1921 aaaatcagat ctgctcgagc cttcgctact gaaattatct tcgttaatgc gttacatgct
     1981 gtacgagacg gatgagcaaa gagttccgct cgaaagagag attgaatatc ttcaaagcta
     2041 cattgacctc cagcagcaac gctttggaaa aaatgtaaaa gtgaatgttt ctatccgcgg
     2101 cgttaattgc tctcatgaaa tagaaccgat gttgctgata cctttcgtag agaacgcgtt
     2161 taaacacggc acgggaatta tagaatgcgc gcagatcaat atagatctta aagaaacaaa
     2221 tgggatgttg caattcatcg taagcaacaa gtacaacgat aatgtaaacg gcgcaaaaga
     2281 taaaagttcc ggcataggtt taaacaatgt acaaagacga ctaaatttac tttacggtaa
     2341 taatcatact ttactgatca acaaagaaaa cggctggttc accgtttcgc ttcaaattaa
     2401 tctgcactga tgctgagatg ccttgcaata gacgatgagc cgctggcgct cgaactgctg
     2461 gaggacaaca ttagcaaagt ccctttttta gaactggtcg caagctgcag caatccgctg
     2521 gaagcaatga aagtgcttca aaacgaatcg atcgatctta tctttcttga tattcaaatg
     2581 ccaggcctca ccggccttca atttatccag agcattacgg aaaagccaat gttcattctt
     2641 attactgcct atgaaaaata tgcactggaa ggatttaacc tcgacgtggt ggactacctc
     2701 gtaaaaccgg tttcactcga caggttcatt aaggcctgcc ataaggcaca tgagctgcat
     2761 caattaaaat ccggaaaaga aaaaggtgaa gggaacagcg cttcttattt tttcatcaat
     2821 gtggattaca gcctggtgaa agtcgtgttt tcagatatta tgtggatcga aggctttaaa
     2881 gattacctga agatacacct caaaagcacg tcgaaaccta tcgttgcacg cctcaccatg
     2941 aaatccatcg aagagcaact tccggcgtcg atgttcatcc gcgttcaaaa atcttttatc
     3001 gtttcaaaag agcacattac tgcggtacgg aagaacagtg tttttatcaa cgacattgaa
     3061 attccggtag gcgataatta taaagatgcc atcacagctt tgaccggcaa gcactaattt
     3121 tacattccta aaattcattc gatgaaagtc aaagctttcc tcttcgcgat cgcgttcttt
     3181 tttgctgcca tccagctgca ggcgcaacaa ccggttgatg gaataattgc tgcttatttt
     3241 gaagcaattg gaggcgccga taagatcgcg caaataaatt caatttacat agagggaaat
     3301 ttacaaatga tgggaagcca aagccccatg aaggtcacaa tactcaacgg caaaggttat
     3361 aagactgaga tgaattttgg cggaagcgat gttgttcaaa cgatcaccga taacggtgga
     3421 tggatgataa atccgttcat gggctccccg gaacctgttc ccttgcctaa tgagcagtat
     3481 gtcgccctga agcaacagat ccacataggc gggccgctgt ttaagtattc aacgaacgga
     3541 taccgcgtga attttgctgg catggatgtg ctggatggca aggcggaata taaagtcgat
     3601 gcggtttctc cggacagcgt gaagaacact ttttatatcg actctgttac ggattatgtt
     3661 gatcagctgt cgatcaataa cgcaggacag acaattactg tgaaatattc caattataaa
     3721 aaaacggatt ttggaaatct gatgccgttc aaagagcaga tcatatcgcc ggaaggttca
     3781 gtcgacatca cct
//
LOCUS       DASQJI010000712         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_254900,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000712 DASQJI010000000
VERSION     DASQJI010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254900"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..>1681
                     /locus_tag="VEV83_19100"
     CDS             26..>1681
                     /locus_tag="VEV83_19100"
                     /inference="COORDINATES: protein motif:HMM:NF019136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47296.1"
                     /translation="MNIINLKEQKIEHLGNADGHFMNPMDFLQNERGDILVGTADAGI
                     VAINPQNGVIKYMNSSTDMVHSMVQDSSGNLFAATMLGIHLFGEDGFSTRHIGKYQIY
                     SMTQDSSGFIWILYQSQGVDILNARTGLVRSLTTKQGLSNNYMENVYNYGNKLYLTSW
                     GGLDIIDQEHHTMEHIGKSQGLRADHLSIVFADEKGRLWIGEQLPWVNSVQRFGGFEI
                     YDPKKKTTVRLDTTNGLCDNDVTDIKTDKSNNIWISTYARNQAIDIFNVRNNTISHLL
                     NNLGPQECMKPMCTDDSGRIWIGTGIGIFIANPAKNTLSKFQTPTESPCTNINSLNWH
                     DGRMYVRSQEGLSIITPPSVKNDTAESGKWRVEHFGHSFGFFNQAWVYISDLVTKEGE
                     FWWGDNGITVLHNANKVKPKQRTSITGMDLNFSGEQFYFSDQSRFIHNVTDTISSYTK
                     NSYFLKGPLAQSPAASKKGITWDSVTGSYNLPVNLHLSYNNNFIRFHFTGTDPSTQRK
                     MRYRYVLEGVDKKWSDVTYDPYSGYYLNLQPGQYNFKVASKGLT"
BASE COUNT          547 a          297 c          367 g          470 t
ORIGIN      
        1 aatattctat cgctttcaag gaccgatgaa tattataaac cttaaagaac aaaaaataga
       61 acacctggga aatgctgatg ggcatttcat gaatccgatg gactttttgc aaaacgaaag
      121 gggtgatatt ttagtaggaa ctgcggatgc agggatagtt gctattaacc cgcaaaatgg
      181 cgtgatcaaa tatatgaatt catcaactga tatggtgcat agcatggttc aggattcaag
      241 cggaaatctt tttgccgcta ctatgttagg aatccatctg tttggcgaag atggcttcag
      301 cacaagacat atcggaaaat accaaatcta cagtatgact caagattctt ccggctttat
      361 ctggattctg taccaaagcc agggtgttga tatattgaac gcccgaacag gtttggttag
      421 atcattaaca acaaagcagg ggttaagtaa caactacatg gaaaatgttt ataattatgg
      481 aaataagctg tacttaactt cttggggtgg attagatatt attgaccagg aacatcatac
      541 gatggagcac ataggaaaat cgcaaggtct tagggctgac cacttatcca tcgtatttgc
      601 tgatgaaaaa gggaggcttt ggatcggtga gcaactgccg tgggttaatt ccgttcaacg
      661 ttttggtggt tttgaaatat atgatcccaa aaagaaaacg actgttagat tggatacaac
      721 aaatggattg tgcgataatg acgttacaga tataaaaaca gacaaaagta ataatatctg
      781 gatcagcact tatgcaagga atcaagcgat cgatattttt aatgtccgaa ataacacaat
      841 cagtcatcta ttgaataacc tcggaccgca ggaatgcatg aaaccaatgt gcacagacga
      901 cagcggtcgt atatggatag gcacaggcat tgggatcttt atcgctaacc ctgcgaaaaa
      961 cacactcagt aaatttcaaa cgccgaccga atccccatgt acaaatataa attccttaaa
     1021 ctggcatgac gggcgaatgt atgtaaggtc gcaggaaggc ctaagtataa ttacgccacc
     1081 ttcagtaaaa aatgataccg cggagtcagg caaatggagg gttgaacatt ttggtcattc
     1141 gtttggattc tttaaccagg cctgggttta tatatcagac cttgttacaa aagagggtga
     1201 attttggtgg ggtgataatg gtattactgt cttgcataat gccaataagg ttaagccgaa
     1261 acaaagaact tccatcactg gtatggatct aaacttttca ggcgagcagt tttatttttc
     1321 agatcagtcc cggtttattc ataatgtaac agatactatc tcgagttata ccaaaaacag
     1381 ttattttctt aaaggaccgt tagcgcaatc accggcggcg tcaaagaaag gaattacctg
     1441 ggacagtgta acgggcagtt ataacttacc tgttaatttg catctttctt acaataataa
     1501 ttttatcagg tttcatttta ctggaaccga tccttccacc cagcgtaaga tgcggtacag
     1561 atatgttctg gaaggagtag ataaaaaatg gagtgatgtt acttatgatc cttatagcgg
     1621 ttattatttg aacctgcaac cgggtcaata taattttaaa gtagcgagca agggacttac
     1681 a
//
LOCUS       DASQJI010000713         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2558194,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000713 DASQJI010000000
VERSION     DASQJI010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2558194"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VEV83_19105"
     CDS             <1..609
                     /locus_tag="VEV83_19105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK47297.1"
                     /translation="GIYIPRFRNVGDDVQKGFVRGYALAAGGSRGAGDAGDAAIGARF
                     KEQMTEPGDWYMWMTGMGECLPYYENKISLSKEKKDEWGIPQVEIDCEYKTNELNMLK
                     DILSSGADMLEQAGFKNISANDTHEAPGLGIHEMGTARMGRDPKTSILNANNQVWDVK
                     NVFVTDGACMASNACQNPSITYMALTARAANFAVDELKKGNV"
     gene            992..1384
                     /locus_tag="VEV83_19110"
     CDS             992..1384
                     /locus_tag="VEV83_19110"
                     /inference="COORDINATES: protein motif:HMM:NF021119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore germination protein GerW family protein"
                     /protein_id="HYK47298.1"
                     /translation="MENANFIENIATRLGQSATVKNVYGEPIVAGDKTIIPVAQVALG
                     FGGGYGKGGPKKFLKEEIVSDDNNKVKTGEGLGGGGGMFARPKGVYEISSQGTRFIPA
                     NFMKELLTAAFVGFLIGATMIKRRKKLR"
BASE COUNT          471 a          337 c          434 g          407 t
ORIGIN      
        1 ggtatttata ttccgcggtt tcgcaatgtt ggcgatgatg tgcaaaaggg ttttgtgaga
       61 ggatacgcac ttgccgccgg agggtcgcgt ggtgcgggcg atgccggtga cgcggcgatc
      121 ggtgcgcgtt tcaaagaaca aatgacggag ccgggcgatt ggtatatgtg gatgaccggc
      181 atgggtgaat gtcttcctta ttatgaaaac aaaatatcgc tgagcaagga gaaaaaagat
      241 gagtggggca ttccgcaagt tgaaatagac tgcgaataca aaacgaatga gctgaatatg
      301 cttaaagata ttttgagtag cggcgctgac atgctcgaac aagccggctt taaaaatata
      361 tcagcgaacg atacccacga agcgccgggc cttggcattc atgaaatggg aacggcaaga
      421 atgggccgcg atccaaagac ttcaatactc aacgcaaaca accaggtgtg ggacgtaaaa
      481 aatgttttcg ttaccgatgg tgcatgtatg gcatcgaatg catgccagaa tccatcgatc
      541 acttatatgg ctcttactgc aagagcggcg aattttgccg tggatgagtt gaagaaagga
      601 aacgtgtaga ttgcggagtt cggatttacg atttacaatt tacaatttac aatttcgacc
      661 gtaatgcgcg aaggcgatca taaatgaatg caacaatggt attgatcggg aatctgctgg
      721 tagacggtcg attgtactaa ctacagagca gcagagtgcc gtggagtgct gcatagaatg
      781 ggattcccga ccaggtcggg aatgacggac ctaaaaaagc gcggccgtca tagtcaacgc
      841 acacttttta ccgtcatgcc cgaacgggag cataaataaa cgcagaatga tgttgatcgg
      901 gcacctgttg cttactcact tctaagcgtg ataaaaatca tccgttttct ctttgaaatt
      961 tcctagtttg ctgatcataa aaaacctcaa catggaaaac gcaaatttta ttgaaaatat
     1021 cgcgacgcgg ttaggtcaaa gtgcaacggt aaaaaacgtt tacggcgagc cgattgttgc
     1081 cggcgacaaa acgataattc cggtagcaca ggtggcttta ggttttggcg gtgggtatgg
     1141 aaaaggtggg ccgaaaaaat ttcttaaaga ggaaatcgta tcagacgaca acaacaaggt
     1201 aaagacaggc gagggccttg gcgggggtgg cggcatgttt gcacggccca aaggtgttta
     1261 tgagatctct tcacagggca caagatttat cccggcaaac ttcatgaagg agttacttac
     1321 cgcagcgttt gtcggctttt taattggagc aacgatgatc aaaaggagaa agaaattacg
     1381 ctgactgttt tcacgcgaag tggttttctg atctaccttc ttctccctgc ttgtgcgcga
     1441 tccgttgcag cttctatcac gtaatagaat tatgtgtgca tggactaaag aattcgccgc
     1501 cccatgcgga gcggcgaaaa attattaaag ccgtttgaaa acataatcgc gtcaagccaa
     1561 atgtccttgc atcaactctg ctaccatcgc ctggaaatcc tctttcttgt tggtatgcgg
     1621 taacggttcg cccggcactt ctacatcta
//
LOCUS       DASQJI010000714        13635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1484202,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000714 DASQJI010000000
VERSION     DASQJI010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13635
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484202"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VEV83_19115"
     CDS             <1..736
                     /locus_tag="VEV83_19115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK47299.1"
                     /translation="IDVLKGAAEADGVDALIKEVRTQIGKGADLVKLYADYRWGINGE
                     AEPTFTVDELKEAVAVASSSGRTVAVHATTAEGMRRAIAAGVTTIEHGDNGTPEIFAL
                     MKEKHIALCPTLAADDAIAQYRGWRKGVDEEPAMIITKRKSFADALKAGVTICMGGDV
                     GVFPHGDNAREMELMVDYGMNALDVLRSATSVNADVFQINKLVGRIKPGLCADILVVR
                     GDPTLNMHDIRNVKLVMKDGDIYVKN"
     gene            820..2703
                     /gene="yidC"
                     /locus_tag="VEV83_19120"
     CDS             820..2703
                     /gene="yidC"
                     /locus_tag="VEV83_19120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HYK47300.1"
                     /translation="MPLIFYNYAMKDKNTVIGIVLLAILFFVFFWYTNRDQQAYLAHQ
                     KHIEDSLRLDSAAKVTPQQKAAALQDSLINDSLGRVSAAGDFSKTQTAPEQTVTVEND
                     LMKVVFTSHGGRVKSVLLKKYPSQAGGNVVLGGSAADAITYNINTGANHSASTGDLNF
                     TASQPVKNSDGSQTVQFSLQDSSRTGIIHQYIIRPGSYMIDWNIQIAGAGQLLTNGNV
                     NFHFLSQPVQVEKSVDYERRMSDVCFSEGNEFDYISTHTDHKFEKPVQWVSAVQQFFN
                     TTLIAKNNFSGGAVHWSRNTDTSKVIGLVDATMQMQIPSAASASIPMQLYYGPNEYKT
                     LHNAAPEMDKIINLGRDLYSFVRPINKYIVMPVFSFFESFISVYGWVIALLTIFIRLI
                     TSPLVYRSYKSGAKMKVMRPELDALRKKLGSDQQAFAMEQMKLFREAGVNPLGGCLPL
                     LLQIPIFFALYSFFNSNIALRGQSFLWAKDLSTYDVVLQFHTKIWVIGDHISLFSLLA
                     VGTSFLISIYNMSMTPSDPNNPALKYMPYIYPIFMLLIFNSLPAALTWYYTVSNLITL
                     GIQFVIQNYILNHDKILAQIQERRKAPKVKTKSKWQEQYEKMLETQKKVQQMKQQTPR
                     NKK"
     gene            2737..3480
                     /locus_tag="VEV83_19125"
     CDS             2737..3480
                     /locus_tag="VEV83_19125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47301.1"
                     /translation="MKYILASVFLIFGASQSKAQTLTQMPASGNGAGTQAAYSSYIVN
                     NNNFVLPTYAHGGDVGGNPYFSKDWATGSLTTVDNHIFSEGLVFMYSKVDGRLFFKQT
                     DSSVVMQADPAKISSFTLNTDKPHTFVRTDAFTKEYSGNFYEVLVRDEKKYSLLKLTT
                     AEFQENTTSAASNVMTVTSSAGSFSDKVKYYISKDGQLTQVSLKKKSFQTTIASDKDK
                     AEKYFQEHSGNFNEDAAIGLITEINAQVE"
     gene            3534..4265
                     /locus_tag="VEV83_19130"
     CDS             3534..4265
                     /locus_tag="VEV83_19130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47302.1"
                     /translation="MKCLHAPVLLLCCFLSTQVQAQNSFQSGSPYTGTTVTVNGNDVM
                     LPAYAAEKDKFEGSTYFSKEWAPGSVTTTDNTVFSENLLFMYDKMNNELYYKKRDSPA
                     TWKVDLTKVSGFSLETERPHIFMRADYFNKDYTGQYFEVLLLDEKKYSLLKYMKVTYE
                     ENIASKGSQAMNQNFSTGKYVDNVKYFLFKDGVSTEVTLKKKRFEEGLGADAEKAQAY
                     FKDHSGNFNEQAAISLVTEVNSQLN"
     gene            4338..4766
                     /locus_tag="VEV83_19135"
     CDS             4338..4766
                     /locus_tag="VEV83_19135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYK47303.1"
                     /translation="MRKVADILKRKGSHVESVEPEVTVMEALKLMADKNIGSVAVVHN
                     GQFVGLMTERDYSRKVILKGRSSNETTVGEIMTSHGPSVSKADTVEFCMQLMSSQNLR
                     YLPVMEQNALAGIISINDVVTETILTQKETIEHLQNYIHS"
     gene            4862..6862
                     /gene="rpsA"
                     /locus_tag="VEV83_19140"
     CDS             4862..6862
                     /gene="rpsA"
                     /locus_tag="VEV83_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HYK47304.1"
                     /translation="MSENNIINLPADEAGANADAQESANVEENTEATTATTNGPVEEA
                     ETTSASESTPEPVIENSVAESIPQPVEERLAAHDDFDWSIDKRNVTQYNQEEKEKYDK
                     VYENTFVSIEDGEIVNGSLVALTKTDAVINIGFKSDGLVSLNEFRDTPNVKIGDIVEV
                     MVVEKEDRDGNLHLSRKQARIFRAWERIVEVHKTGEVVTGVVTSKTKGGLIVDVFGLE
                     TFLPGSQIDVKPVTDYDQFVNKTMEFKVVKINEAIKNAVVSHKALIESDIEAQRAEII
                     SKLEKGQVLEGTVKNITDFGAFMDLGGLDGLLYITDISWGRISHPSEVVKMDQKLQVV
                     VLDFDDDKRRISLGLKQLTPHPWDVLPEWIHEGAVVKGRVVNIEDYGAFLEILPGVEG
                     LVHVSEITWANTPINAKEFFKLGNEHEAKVVTLDKDARKMSLSIKQLTEDPWNNIETK
                     YPDGSKHTGVVKNITPYGVFVELEPGIGGMIHISDLSWLKRFNHPGEYTKVGSNIDVL
                     IMAIDKDNRKLQLGHKQLEEDPWTALQDTFAVGSVHEGTIIRKDDRGAIVQLPYGLEG
                     FAPNRHLIKEDGKSLVADETSQFMVIEFDRNEKRILVSHTKIWEQAKAQEQEAAKKEQ
                     RVESDKARKAVKNIQSKVEKATLGDLGALAEIKEKLRKEEEK"
     gene            complement(6958..7527)
                     /locus_tag="VEV83_19145"
     CDS             complement(6958..7527)
                     /locus_tag="VEV83_19145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HYK47305.1"
                     /translation="MKKIVVAITGASGAIYAKLVLDKLMTIHDQWDELGVVISNNAKQ
                     IWETELNNTDYKNYPIKYYDKYDFNAPFASGSAQYNIMIIVPCSMGTLGRIASGISDD
                     LVTRAADVVLKERRKLILAIRDTPYNLIHIKNMETVTLAGGIICAASPSFYSKPGSVE
                     ELAGTVVNRILDLCGFKTNSFRWGTSSDV"
     gene            7794..8657
                     /locus_tag="VEV83_19150"
     CDS             7794..8657
                     /locus_tag="VEV83_19150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HYK47306.1"
                     /translation="MAETKPTATAAARSISSVQPKRSRNSISWLAPLTCIILGYIIWR
                     FVIGNPANFDRPDASGGFWPDHQGPKSALSRMYLGGIIVPILIGAFLTVVTFVIERLL
                     TVTKATGTGNIAEFIRTVQYHLANKDLDKAIVACDKQKGSVGNVMKAGLRKYREMTTN
                     TELTTDQKLLNIQKEVEEATALELPMLEKNLVFLSTIASVATLMGLLGTVIGMIRSFA
                     SLGESGGGEAAQKLSQGISEALYNTALGIGTSAIAIIMYNVFTTKIDSITFGIDESGF
                     TLTQSFASNYK"
     gene            8714..9376
                     /locus_tag="VEV83_19155"
     CDS             8714..9376
                     /locus_tag="VEV83_19155"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYK47307.1"
                     /translation="MGRPKIARKSTAIDMTAMCDVAFLLLSFFILTTKFKPSEAVPIS
                     TPSSVANKIAPETDVVMISLNADGHVYLSVGDSQRDKDKKQAMLESINQRFSLGLTPT
                     DIANLKKAPFIGVPIAQLKQQAALSTDQMNSKTLPGIPSQDSARNEMNDWMAAAVQAY
                     QGEKMNLILKGDNVAKYPVFKNIIAAFKKNEQFKFSMVTNPQAVPQGSDLWKDNVTGK
                     SQ"
     gene            9406..9948
                     /locus_tag="VEV83_19160"
     CDS             9406..9948
                     /locus_tag="VEV83_19160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYK47308.1"
                     /translation="MAEMDTSGGGHHKKGPGVKKAKKLSTRVDLTPMVDLGFLLITFF
                     IFTTTMSQPTAMRLALPDDRVKPEDQNKIKQSGALTILLGRDNNVFYYEGELAPDASN
                     FKASNFKEIRDEIISRKRSADTNLVVVIKPSDECTYKNVIDILDEMSINVVKRYAMVD
                     ITDIEDQLIKRTEGGGTGGQ"
     gene            9998..10822
                     /locus_tag="VEV83_19165"
     CDS             9998..10822
                     /locus_tag="VEV83_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK47309.1"
                     /translation="MEANKIMSADILDILFEGRNKEYGAYELRKSYNHRMVKALLIMI
                     AVCVLIFVGTMVAKSIRDRAPKQVVVQDVQLEDIKEPEKKAEPPPPPPPKVEPPKVEV
                     TKFTPPKIVKDEEVKPEEKPPEQEKLEDTKIGTFNQEGEKSDVVAPPVEEKGTGQVEA
                     PKVQEEDYDKEFTSVQVEAKFPGDWNKYLERNLNAQTPADNGAPPGRYTVTVSFLVSK
                     DGTISEVQALNDPGYGCGAEATRVIKKGPKWQPAIQNGRNVIYRQKQNITFEVTEQ"
     gene            complement(10916..11467)
                     /locus_tag="VEV83_19170"
     CDS             complement(10916..11467)
                     /locus_tag="VEV83_19170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HYK47310.1"
                     /translation="MEKLQPGTILIADPFLKDPNFMRSVVFLCDHKEEGSFGFVLNRK
                     IQYAVGDLINNLEGCDFPVFYGGPVQQNTIHFLHQVPGLITGGEKITDTIYWGGEFDE
                     VVSLLQDNKLSAKQLRLFLGYSGWSEGQLESEMTGKSWLTTYPTSKLVFAGDVDLIWP
                     EALRQLGGRYEQLINYPIDPQLN"
     gene            11597..12940
                     /locus_tag="VEV83_19175"
     CDS             11597..12940
                     /locus_tag="VEV83_19175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK47311.1"
                     /translation="MKKIFPVIIVLISLSLVGIILIQINWFKNQLFVQQERFIEKVEK
                     AGFDVVQELSKQAAASNSFRLNKRQGLQLFPDNLSFKIGRLPTISDRYTTAEINDKLV
                     KSFNKEGLTNLRFEFAITSSSDDFELEMQTEHFQQESFDTTHFRRIVIPIIPETGTDL
                     EGLLAYEHLFIIIPDFKVQVWQSLTWMIVFSALFTVIIIAAFYITVRTMLNQKKMSEI
                     KSDFINNMTHEFKTPLATISLAVDALKNEKVLNDKSKWQYFNNIIKDENRRMNKHVET
                     ILQAALMEKQELKLNLTHIHVHDLLRRVVDNFQLQMQEKNGTVDFLLNAADDTLDVDE
                     VHFSNLVSNLIDNAIKYSKENLVIKIITHATPKHFVLQIQDNGIGMSKETVKHVFEKF
                     YRAHTGNLHNVKGFGLGMSYAKTVIDAHKGKIKVESAPGKGSTFTLEFPHSLAEA"
     gene            complement(12948..>13635)
                     /locus_tag="VEV83_19180"
     CDS             complement(12948..>13635)
                     /locus_tag="VEV83_19180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HYK47312.1"
                     /translation="NYQTVYAKQPGSVAAPTAGLHFTERLMSQLRQQKIQLDFVTLHV
                     GAGTFMPVKSATLGEHSMHAEYFEVSRKLIERLSKKLNESIVAVGTTSLRTLESLYWM
                     GSKLMDHLKKRSAGNITTGDISVEQWEPYELHIQCKVSDALEALLFWMNENKMEKLIT
                     ETQIIIAPPYKLKIAKALITNFHQPKSTLLLLVAAVTGNQWREIYEYALNHDFRFLSY
                     GDACLFFSEM"
BASE COUNT         4137 a         2847 c         3180 g         3471 t
ORIGIN      
        1 gatcgatgtt ctaaaaggag cagcagaagc tgatggggtg gatgcgttga taaaagaagt
       61 tcgtacacag atcggaaagg gcgcagatct tgtaaagctg tacgcagatt accgttgggg
      121 gatcaacggc gaagcggagc cgacgtttac ggtcgacgaa ttgaaagaag cagttgcagt
      181 tgcaagcagt agcggaagaa ctgtggcagt gcatgcaact accgctgaag gaatgaggcg
      241 cgcaatcgct gcgggcgtaa cgacaatcga acacggcgat aatggcactc cggaaatatt
      301 tgcattgatg aaagaaaagc atattgcttt atgtccaacc ctggcggcag acgatgcaat
      361 cgcacaatac cgcggctggc gaaaaggcgt cgatgaggaa ccggcaatga taatcacaaa
      421 gagaaaaagt ttcgcggacg cattaaaggc cggcgttacc atttgcatgg gcggcgatgt
      481 gggcgtgttt ccccacggag ataacgcgcg tgaaatggaa ctaatggttg attatggaat
      541 gaacgccctg gacgtattgc gctcagcgac ttccgttaac gctgacgtat tccaaataaa
      601 taaacttgtc ggaagaatta agccgggcct ttgcgccgac attcttgtgg tgcgcggtga
      661 tcctacttta aacatgcacg atatacgaaa cgtaaagctt gttatgaaag acggagatat
      721 ctatgtaaaa aactgaaccc ggtgatgact aacgtgttaa tcgccattaa caaccatttt
      781 tgaaattcca aaaatttgca agcggtcaat ctcctacctt tgccgctcat tttttataac
      841 tacgcgatga aagataagaa tacggtcatt ggaattgtgc tgctggccat cttatttttt
      901 gtgtttttct ggtacaccaa cagagatcaa caggcgtacc tggcccacca gaaacatatc
      961 gaggattctt tacgattgga ttcggctgca aaggttactc cgcaacagaa agctgcagca
     1021 ttacaggatt cgttaatcaa tgattcgtta ggcagagtta gtgccgccgg agattttagc
     1081 aaaacgcaga ccgcacccga gcaaacggtc acggtggaaa acgacttaat gaaagttgtg
     1141 ttcaccagcc acggtggaag ggtgaagagt gttctgctaa aaaaatatcc gtcgcaggct
     1201 ggaggtaacg ttgtcttagg tggcagcgct gccgatgcaa ttacatataa tattaatacg
     1261 ggcgcaaatc attcggcgtc tacaggggat ttaaatttta cagcttcgca acctgtaaag
     1321 aattcagacg ggagccaaac tgtgcaattc agcctgcaag attcttcccg cacgggcatc
     1381 atacatcagt atataatcag gccgggcagc tatatgatcg actggaacat acagatcgcc
     1441 ggtgccggcc agttgctcac gaatggtaat gtgaattttc attttctttc gcagcctgtg
     1501 caggttgaaa aatcagtcga ctatgaacgt cgtatgagtg atgtttgttt ttcggaagga
     1561 aatgaattcg attatatctc gacccatacc gatcacaaat ttgaaaaacc agtgcaatgg
     1621 gtgagtgctg ttcagcaatt ttttaatacc acattaattg caaaaaataa ttttagcgga
     1681 ggtgcagtgc actggagccg taacaccgac acaagcaagg tgatcggact tgttgacgca
     1741 actatgcaaa tgcagatccc atccgcagcg tcagcatcaa ttcctatgca attgtactac
     1801 ggtccgaatg agtataagac attgcacaat gcagcgccgg aaatggacaa gatcataaac
     1861 ctcggaaggg atctttattc tttcgtccgg ccgatcaata aatacatcgt gatgccggtc
     1921 tttagttttt tcgaaagctt tatttcggtg tatggatggg tgatcgcgtt gcttaccata
     1981 tttattcgtt taataacttc tccgttggta tatcggagct ataaaagcgg cgccaaaatg
     2041 aaagtgatga ggccggagtt ggacgcgttg cgcaaaaaat taggcagcga tcaacaggca
     2101 tttgccatgg agcaaatgaa attgttcagg gaggccggcg taaatccgtt gggcggctgt
     2161 ttgccgttgt tgctgcagat accgatcttc tttgcgctct acagtttctt caattcaaat
     2221 attgcattaa ggggccaaag ctttttgtgg gctaaagatc tctcgaccta tgatgtggtt
     2281 ctgcagtttc ataccaaaat atgggtgata ggcgatcaca tcagtttgtt ttctttattg
     2341 gctgttggta cgagcttttt gatttcaatc tataatatga gcatgacgcc gagcgatcca
     2401 aataacccgg ccttgaagta catgccttac atttacccga tcttcatgct gctcatattc
     2461 aactccctgc ccgccgcgtt gacatggtac tacactgtat caaatctcat cacgctgggt
     2521 attcagttcg ttatccaaaa ctatattttg aatcacgaca aaatactcgc acagatccag
     2581 gaacgccgga aagctcccaa ggtcaagaca aaaagtaagt ggcaggagca gtatgagaaa
     2641 atgttggaaa cacaaaagaa ggttcagcaa atgaagcaac aaaccccccg taataaaaaa
     2701 taatccacca acaataatct aaagtcaatt gaaagtatga agtacattct tgcaagtgtg
     2761 ttcctgattt ttggggcgtc acaatcaaaa gcgcaaacat taacgcaaat gccggctagt
     2821 ggtaacggtg ctggaacgca ggctgcttac agcagctaca tcgtgaacaa caacaacttc
     2881 gttttgccca cgtatgctca tggtggcgat gtaggaggca atccgtattt tagtaaagac
     2941 tgggcaaccg gaagcctgac tactgttgat aaccacattt tcagcgaagg ccttgtgttt
     3001 atgtacagca aggttgacgg caggttgttt ttcaagcaga ctgattcgtc cgttgttatg
     3061 caggccgatc cggcgaagat ttcttcattc actttgaaca ccgacaagcc gcacacattt
     3121 gtgcgcaccg acgcattcac aaaagagtat agcggtaatt tttatgaagt gctggtgaga
     3181 gatgaaaaaa aatactcgct gcttaagttg accacggctg aattccagga aaacacaacg
     3241 agtgccgcat caaacgttat gacagtaacc agctcagccg gttccttctc cgataaggtg
     3301 aaatattaca tcagcaaaga tggccagtta acacaggtct ctttgaagaa aaaaagtttt
     3361 caaactacca ttgcttctga taaggataaa gcagaaaaat acttccagga acattcgggc
     3421 aacttcaatg aagacgcggc gatcgggctt atcacagaaa taaatgcaca agtggaatag
     3481 gcgttgtgga atcgcaaaaa gtttcctatc ttaatacctt taaaagaaaa aaaatgaaat
     3541 gcttacatgc acctgttttg ttgctttgtt gttttctgag cacacaggtc caggcacaaa
     3601 acagttttca atcgggaagt ccttatacgg gcacaacagt aactgttaat ggcaacgacg
     3661 tgatgctccc tgcctatgct gcagaaaaag acaagttcga gggcagcacc tattttagca
     3721 aggaatgggc tccaggcagt gttacaacaa cggataacac agttttcagc gagaaccttt
     3781 tgtttatgta cgacaaaatg aataatgagc tgtattataa aaagcgcgac tccccggcaa
     3841 cgtggaaagt tgacctcacg aaagtttcag gattcagttt ggaaacagaa cgacctcaca
     3901 tttttatgag agccgattat ttcaacaaag attatacggg ccagtatttt gaagtgctat
     3961 tgctggatga gaaaaaatat tcgctcttga aatatatgaa ggttacgtat gaggagaaca
     4021 tagccagtaa gggctcgcag gcgatgaatc agaatttctc aacaggcaaa tacgttgata
     4081 acgtaaaata ttttcttttc aaagatggtg tttcaactga agttactctc aaaaagaaaa
     4141 gattcgagga agggttgggc gccgacgccg aaaaggcgca ggcatatttc aaagatcaca
     4201 gcggcaactt taacgaacag gctgcgataa gcctggtcac tgaggtgaat tcgcagctga
     4261 attaacaccg gttctttccg acaaactgca aaaattaaaa cgatagattg ttttaagtaa
     4321 tttgtaactt tatctccatg agaaaagtcg cagacatact aaaacgaaaa ggcagccatg
     4381 tggaatccgt agagccggaa gttacggtga tggaagcttt gaagttgatg gccgataaga
     4441 acattgggtc ggtagccgta gtacataacg gccaatttgt aggcctgatg actgagcgtg
     4501 attattcccg taaagtgatc ttgaagggac gctcctctaa cgaaacaaca gttggcgaga
     4561 tcatgacctc ccacggtcct tcggtatcaa aagccgatac tgttgagttt tgcatgcagc
     4621 ttatgtcttc tcaaaatctg cgttatctgc cggtgatgga acagaatgcg cttgccggca
     4681 ttatatctat caacgacgtt gttaccgaaa cgatcctcac tcagaaagaa accatagagc
     4741 atctgcaaaa ttatatccat tcttaagccg gtttttttgg tccatttcgc ggggaaaagc
     4801 ctgtttttcc cgatcttttc ttagctttgc cgccccgaac taaaaccatc gggattttat
     4861 catgagtgaa aataatatta ttaacctgcc ggccgacgag gcgggcgcaa acgctgatgc
     4921 acaggagtct gccaacgtag aggaaaatac ggaggcaact acagcgacaa caaatggacc
     4981 tgtagaagaa gcagagacta catccgcttc tgaatcaacc ccagaaccag tgatcgaaaa
     5041 ttctgtggca gagtcaattc cccaacccgt tgaagaaaga ctcgccgcgc acgatgattt
     5101 cgattggagc atcgacaaac gcaatgtaac gcagtacaac caggaagaaa aagagaagta
     5161 tgacaaggtt tatgagaaca cttttgtttc catcgaagac ggagagatcg taaatgggtc
     5221 cctggtagct ctgactaaaa ctgacgcagt tattaatatc ggcttcaaga gcgatgggct
     5281 tgtttctctg aatgagtttc gggacacacc aaatgtaaag attggcgaca tcgtagaagt
     5341 gatggtcgtt gaaaaggaag accgcgatgg taacctccat ttgagccgca agcaagcacg
     5401 catattcaga gcatgggaaa gaattgtgga ggttcacaag acaggggaag tagttacagg
     5461 tgtcgtaacc agcaaaacaa aaggcggctt gatcgtggac gtattcggat tggagacatt
     5521 cctgccgggt tcacagatcg atgtaaagcc cgtaaccgat tacgaccagt ttgtaaataa
     5581 gacgatggaa tttaaggttg tgaagatcaa tgaagcgata aagaacgccg tggtctcaca
     5641 taaggctttg atcgaaagcg atattgaagc acagcgcgcc gaaataataa gcaaacttga
     5701 gaaagggcag gtgctggaag gaaccgtgaa aaacatcaca gacttcggcg cattcatgga
     5761 cctcggaggc ctcgatggat tgttgtacat cacagacatt tcatggggac gtatttcgca
     5821 tccaagcgaa gtagtgaaga tggaccagaa attacaggtc gtagtgctgg atttcgacga
     5881 cgacaagagg cgtataagcc tcggcctcaa gcagctcacg ccgcatccat gggatgtgtt
     5941 acctgaatgg atacatgaag gtgctgtggt gaaaggaagg gttgtgaaca tcgaagacta
     6001 tggtgccttc cttgaaattc tacccggggt tgagggcctt gtgcatgtaa gtgagatcac
     6061 ctgggctaat acccccatca atgcgaaaga attttttaag ttgggtaatg agcacgaagc
     6121 aaaagttgta acgcttgata aggatgctcg taagatgagt ctttctatca aacagcttac
     6181 cgaagatccg tggaataata tcgaaacgaa atatcctgac ggaagcaagc atacgggcgt
     6241 tgttaagaac attacacctt acggcgtgtt tgtagaactg gagccgggta taggcggtat
     6301 gatacatatc agcgacctaa gttggctgaa acgttttaat catccgggtg aatatactaa
     6361 ggtgggtagc aatatcgatg tgctgatcat ggcgatcgat aaagacaaca ggaaacttca
     6421 gttaggacat aaacaattgg aagaagatcc ctggacggcg ttgcaggata catttgcggt
     6481 gggcagtgtt catgaaggaa cgatcatcag gaaagacgac cgcggcgcca tcgtgcagtt
     6541 gccttacggg cttgaaggat ttgcacctaa ccgtcatctc atcaaagaag acggaaagag
     6601 cctggtagct gacgaaactt cacagtttat ggtgattgag ttcgacagga atgagaaacg
     6661 cattttggtc agccacacaa agatctggga acaggcaaaa gcacaggagc aggaagctgc
     6721 gaagaaagag caacgcgtag agtcagacaa agcgcgcaaa gcagtaaaga atatccaaag
     6781 caaagttgaa aaagctactt taggagacct cggtgcgctg gctgagataa aagaaaagtt
     6841 gagaaaggaa gaagagaaat aaaacaattt tcggcgaaca atattcaagg ctgtttcgaa
     6901 agaagcggcc ttttactttt tgtattgcat cggttagtaa gtcattttcg ccacgttcta
     6961 aacgtcagaa ctcgttcccc acctgaagct gtttgtttta aagccgcata gatcaagaat
     7021 gcggttaacg acggtgcctg cgagttcttc aacagatccg ggcttgctgt aaaaagaagg
     7081 cgatgccgcg cagattattc cacctgcaag cgtgacagtt tccatattct ttatgtggat
     7141 caaattgtaa ggggtatccc tgatcgcaag aataagtttt cttctttctt ttaggaccac
     7201 gtcagccgct cgtgttacaa ggtcatcgct gatgcctgac gcgatgcgtc cgagtgtgcc
     7261 catgctgcat ggaacgatga tcatgatatt atactgcgca gatcccgatg caaacggagc
     7321 gttgaaatca tacttatcgt agtattttat cgggtaattt ttatagtcag tgttatttaa
     7381 ttcagtttcc caaatttgct ttgcattgtt gcttattacg acaccaagtt cgtcccactg
     7441 atcatggatc gtcatcaatt tatcaagaac aagttttgca tagatcgcgc cgctggctcc
     7501 tgttattgct acaactatct tcttcatttc ttgcatacaa aaattacgtc atcgttggtt
     7561 aattctaacg tccgctgcgg gtaagctgga acgtttattg cggctgcaaa ctaatgacta
     7621 ttagcaaagg ggaaattaaa agaaaaaata atttggaaaa attgttgctt tgaagaattt
     7681 aattaattta caagcccaat aaaacataaa tcgttggttg cttgttttta caggtgggtt
     7741 atcgaaaacg tattaaatca aacaaagttt aaaacctaaa aatcaatttt gttatggctg
     7801 aaacaaaacc gactgctacg gcagcagcaa gaagcatctc ttccgtacaa ccaaaaaggt
     7861 cacgcaattc catctcatgg cttgcgcccc ttacctgtat tattcttggc tatattattt
     7921 ggcgttttgt gatcggcaat ccggcaaatt ttgacaggcc tgacgcgtcc ggtggttttt
     7981 ggccggatca ccagggacca aagtccgcat tatcccgtat gtacctcggt ggtatcattg
     8041 tgccgattct tatcggggca ttcttaacgg ttgtaacctt tgtgatcgaa agacttctta
     8101 ccgttacaaa agcaacgggc acaggcaata ttgcggaatt tatccgcact gttcaatatc
     8161 acctggctaa caaggacctg gataaagcca tagtagcatg cgacaaacaa aaaggttcgg
     8221 taggcaatgt tatgaaggcc ggtttacgga aatacaggga gatgacaaca aacactgagc
     8281 tcaccacaga tcagaaattg ctgaatattc aaaaggaagt ggaggaggcc actgcgctcg
     8341 aactcccgat gctggaaaag aaccttgtgt ttctttcaac catcgcctcc gtagcaacgt
     8401 tgatgggtct gcttggaacg gtgatcggga tgatccgctc atttgcttca cttggtgaaa
     8461 gcggtggtgg tgaagcagct caaaagttgt cgcaaggtat ttctgaggca ttatataata
     8521 ccgcacttgg tatcggtacc tcagccatcg ccattatcat gtataacgtt tttactacga
     8581 agatcgactc aatcacgttt ggtatagatg aatccggttt tacattaaca caaagttttg
     8641 cttctaatta caaatagttt gtggaaagtg gaagttgatg catctaatcc tctgaacaag
     8701 taaattatag ataatgggaa gaccgaaaat tgcgagaaag agcaccgcca tcgacatgac
     8761 cgcaatgtgc gatgttgcat ttctgcttct ttctttcttt attctgacca ctaagttcaa
     8821 gccgtctgag gctgttccaa tcagcacacc cagttccgtc gccaacaaga tcgcgccgga
     8881 aaccgatgtg gtgatgatct ccttaaatgc agacggccat gtatacttgt ctgtcggtga
     8941 cagccaacgc gacaaagaca aaaagcaggc aatgctcgag tccattaatc agcgttttag
     9001 cctcgggctc acgccaaccg acattgctaa tttaaaaaag gctcctttta taggcgttcc
     9061 aatcgcccaa ttgaaacaac aggcggcact gtcaacggat caaatgaaca gcaaaacgct
     9121 tccgggcatt ccttcccagg attcagccag aaacgaaatg aatgattgga tggccgcggc
     9181 tgtgcaggca taccagggtg aaaaaatgaa ccttatctta aagggagaca acgtcgcaaa
     9241 atacccggtg ttcaagaaca taattgcggc atttaagaag aatgaacaat ttaagttttc
     9301 catggtaacg aatccccagg ccgtgccgca gggcagtgat ctatggaagg ataatgtgac
     9361 gggtaagtcg cagtagtaat tgtttaaaaa ctaaactttg tttttatggc agaaatggat
     9421 acttccggtg gcggtcatca caagaaagga ccgggggtta aaaaagcgaa aaaattatcg
     9481 acaagggttg accttacgcc tatggttgac cttggatttc tcctcataac gttttttata
     9541 ttcactacaa cgatgagcca gccgacagcc atgcgtttgg ctcttcctga cgaccgcgtg
     9601 aagcccgaag atcaaaacaa gatcaagcag tcaggcgcac ttacaattct cctgggcagg
     9661 gacaataatg ttttttatta tgaaggagaa ctggcaccgg acgcctcaaa cttcaaggct
     9721 tcgaatttta aggaaattcg tgatgagatc atcagccgga aacgttcggc ggatacaaac
     9781 ctcgtcgttg tgatcaagcc aagtgatgaa tgcacatata aaaacgtcat cgacattctg
     9841 gatgaaatga gcattaacgt tgtaaaacgc tatgcgatgg tcgatatcac agatatagaa
     9901 gatcagctta ttaagagaac tgaaggcggc ggaactggag gtcagtagtt tgtggaaaat
     9961 aaaggctttt gaatctaaga tctaaaaaaa cattttaatg gaagcaaaca aaataatgag
    10021 tgccgatatt cttgatattc tgtttgaagg cagaaataag gaatatgggg catacgaact
    10081 gagaaagagc tacaatcaca ggatggtcaa ggctctgttg atcatgatcg ctgtttgcgt
    10141 tttgattttt gtgggtacga tggtggcaaa atcgatcagg gatcgggcgc ctaaacaggt
    10201 tgttgtccag gatgttcaac tggaagatat taaagagcct gagaaaaaag cggagccacc
    10261 accaccgcct cctccgaaag tggagcctcc gaaagtggaa gtaacaaagt tcacgcctcc
    10321 gaagatcgta aaggacgagg aagtgaaacc ggaagaaaaa ccgccggaac aggagaaact
    10381 tgaagatact aagatcggta ctttcaacca ggaaggagag aagtcagacg tggttgcgcc
    10441 gccagtggaa gagaagggaa ccggccaggt agaagctccg aaagtgcagg aagaagatta
    10501 cgataaggag tttacgagcg tacaggtaga ggccaaattc ccgggcgact ggaacaaata
    10561 ccttgaacgg aatcttaacg cgcaaacgcc tgcggataac ggagctcctc cgggacgata
    10621 taccgttaca gtttcattcc tcgtgtcaaa ggatggaacg atctccgaag ttcaggcatt
    10681 gaacgatccg ggttatggat gcggtgccga ggctacccga gttatcaaga aaggacctaa
    10741 atggcagcct gccattcaaa acggacgaaa cgtaatatac cggcaaaagc agaatattac
    10801 attcgaagtt actgagcagt aaatcagaag cgaaataata agattcaagg ccgcaatctg
    10861 cggccttgat tattttacac caaacaatga atgtttgcct ctaaaaaagc ctaagtcaat
    10921 tcaactgcgg atcgattggg taattaatta gttgttcgta tctgccacca agctgtctca
    10981 atgcttcggg ccagataaga tcgacgtcgc cggcaaatac gagtttagat gttgggtagg
    11041 tcgtcaacca gctttttccc gtcatttccg attcaagctg accctcgctc cagccactgt
    11101 atccgaggaa taatcgaagc tgttttgccg aaagtttatt atcctggagc aatgaaacca
    11161 cctcgtcaaa ttcgccgccc caataaatgg tgtctgtaat tttttcgccg ccggtaatga
    11221 ggcctggaac ctggtgcaaa aaatggatag tattttgttg gaccgggcca ccataaaata
    11281 cagggaagtc gcagccttca aggttattga taagatcgcc gaccgcatat tgaatcttcc
    11341 ggtttaaaac aaaaccgaaa ctcccttctt ctttatgatc gcacagaaaa accaccgatc
    11401 gcataaagtt cgggtctttc aaaaacggat cagcaataag tatagtaccc ggttgtaatt
    11461 tttccataat gaaatgtaca aacgaactaa caaagcaaaa aattgatttt ggtaagaaaa
    11521 aaatgcagca gttaaaatgc tgataaagat atttgtatgg tttctgcgtg agagggttca
    11581 aaatatcttt gtttaaatga agaagatctt tcctgttatt attgtactga tctctttatc
    11641 cctggttggt attatcctta tccagatcaa ctggtttaaa aatcaattgt tcgttcagca
    11701 agagcggttc atcgagaaag tcgagaaggc tggcttcgac gtggtgcagg aacttagtaa
    11761 gcaagccgcg gcttccaatt cctttcgttt aaacaagcgc cagggcttac agctttttcc
    11821 cgacaatctt tcttttaaaa taggaagatt gccaacgatc tcagaccgtt acactacagc
    11881 agaaatcaac gacaaactcg taaagtcttt taataaggaa ggtttaacga acctgcgttt
    11941 tgagtttgcg atcacttcca gctccgatga ttttgagctc gagatgcaga ccgaacattt
    12001 tcagcaggag tctttcgata ctacacattt tcgaagaata gtaattccca tcattccgga
    12061 aaccggtact gatctggaag ggcttctcgc ctatgaacac ctttttatca ttatcccgga
    12121 ttttaaggtg caggtgtggc aatcccttac atggatgatc gttttctcag cgctgtttac
    12181 ggtcataatt atagccgcct tttatataac tgtgagaaca atgctcaatc aaaaaaagat
    12241 gagcgaaata aaaagcgatt tcataaataa catgacgcac gaatttaaga cgccgttagc
    12301 caccatctcg ctcgcagtgg atgctttgaa aaatgagaag gtgttaaacg ataaatctaa
    12361 atggcaatac ttcaacaaca ttatcaagga tgagaaccgg aggatgaaca aacacgttga
    12421 aactattttg caggctgcac tgatggaaaa gcaggagctg aaattgaatc ttacgcacat
    12481 tcacgttcac gacctgctgc gacgcgtggt tgataacttc cagttgcaaa tgcaggaaaa
    12541 aaacggcacg gtcgactttt tgctaaacgc tgcagacgat acgctggatg ttgatgaagt
    12601 acattttagt aacctcgttt caaatcttat cgacaacgcg atcaagtatt caaaagaaaa
    12661 cctcgtaata aaaataatta cgcacgccac gccaaaacac tttgttctcc agatccagga
    12721 caacggtatc gggatgagca aggagaccgt caagcatgtc ttcgaaaaat tttatcgtgc
    12781 acatacaggc aaccttcata acgtgaaggg ctttggtctc ggaatgagct atgcaaagac
    12841 cgtcattgat gcacataaag gaaaaataaa agtggagagc gcacccggaa aaggcagcac
    12901 attcacttta gaatttccgc acagccttgc tgaggcgtaa acacggttca catttccgaa
    12961 aaaaataaac acgcgtctcc atagctcaga aaacgaaaat cgtgattcaa cgcgtattca
    13021 taaatttctc tccattgatt gcctgttacc gcagctacca gtaacaacaa tgtcgatttt
    13081 ggctgatgaa aatttgtgat cagcgctttt gcgatcttta atttatatgg gggtgcaatt
    13141 atgatttgcg tttctgttat cagcttttcc attttatttt cattcatcca aaacaacaat
    13201 gcctctaagg cgtcggaaac tttgcactga atatgcagct cataaggttc ccattgttca
    13261 actgaaatgt ctcctgtcgt aatattgccg gcgcttctct tttttaaatg atccatcaat
    13321 ttacttccca tccaatataa actttcaagg gtgcgtaaac ttgtagtgcc gactgcaaca
    13381 atactttcgt ttagcttttt agacagacgc tcaatcaact tcctgctcac ttcaaaatat
    13441 tcagcatgca tcgaatgttc acccagcgtg gccgatttta cgggcatgaa cgttccggct
    13501 cccacgtgca gcgttacaaa gtccagttga attttctgct gccttaactg gctcattaat
    13561 cgttctgtga aatgaagccc tgctgtggga gcagcaactg aaccaggttg cttcgcatac
    13621 acagtttggt aattt
//
LOCUS       DASQJI010000715         6507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1944110,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000715 DASQJI010000000
VERSION     DASQJI010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6507
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1944110"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3402)
                     /locus_tag="VEV83_19185"
     CDS             complement(<1..3402)
                     /locus_tag="VEV83_19185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47313.1"
                     /translation="MKAKVIARRVLKVFAWIIGIFIFLVLLVYILIQVPGVQNYAKGK
                     VVSYIQNKIKTKVEIGKLSLDFPKRLVLEQVYFEDQKKDTLLYGGKLRVDISLFKLLS
                     NEVNVQYLELDSVKMHISRINPDTSFNYEYIVKAFSTEQQASAPVDTTSLLKFNIGKI
                     ILHDILATFKDDESGMDSYFYLGNLETNIKTFDPYKYVFNIPAIAVSNINTRIYQYKP
                     LIQNKDSVNPAPSPATSTINPMIEIGSISSRQLLFDYKNDVSAIAANLNIGDFNTHPN
                     NIDLKNLAISLNDLTLNNTVTKVTLGKSQEAKETKDVVAAKTDSQLNNPWKFQLTKVS
                     FNNDELHYDDNNAPRLKEGFDPSHLHITNFNLNGDSLNFTPAVFSGNIDQLAFNEQSG
                     LNLRKFHTKFYYSDSGASLTNLLVQTDATILQNHVIVKYPSIEAASKRMGDIYVDVNL
                     MNSRIAVKDIIAFMPSYKRNLQSQKLSVIKVNAAAKGYLKDLSIPIFEMSGFGHTYVK
                     LSGKLQGLPDTKRAYYNVKINQFTSTKTDILSLLPPKSLPSNVNLPDNFSASGFFKGS
                     MNAFSTELALKTNKGNANVNATMKGGDTYNVKADLQNVDAGYLFKQQQNVGVITAKVT
                     ASGSGFDVKKANAKYSLEVVSAQVKGYTYKNLVANGTIDNGVDKTTASIHDPNISVDL
                     DVTADLRSTYPPLKLDMQIDTLNAKALNLTADTLSLSGHIVADLPSTNPDDLVGTVDI
                     NNLSVTSGSQHYSTDSLSLVASGTPDNKSIVVKSDAINAELIGQYKLTEMGQAVEQTV
                     NQYYNVPGYEQKNISPENWQLNATIRTEGLVLQVAPSLQGSDSISVKAHLNTASNDLG
                     MTVQTQKLVASGYEIDSLNATVQTAGNALNADVSIEGAKSASVQLYRTALTAAVANNQ
                     LDFTLDSKDKKNTTQYAIGGLLNQVGSGFKVSVKPDLTLDYSKWNVSPNNSVQYDSTG
                     VIVNNLSLSQGGQSITVNSTSPSPTAPIRVDLKNFEIGTITKLAHQDSLLASGTINGT
                     AEITNPMGEMVFTSDIQVNNLVYKLDSIGNLQIKVDNKTANAYTADVVLTGHNNDVHL
                     TGTYYTGEGRMDLNLAINSINLAIVKPFAVGQLDDITGIMKGNVTI"
     gene            complement(3399..3602)
                     /locus_tag="VEV83_19190"
     CDS             complement(3399..3602)
                     /locus_tag="VEV83_19190"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HYK47314.1"
                     /translation="MKNVFYVIAVMLITGWLIGIFIYEVVGLVETLLVLACTVFLFQS
                     GRKPETIKPDSAAVSLNKKKVTD"
     gene            complement(3678..4514)
                     /locus_tag="VEV83_19195"
     CDS             complement(3678..4514)
                     /locus_tag="VEV83_19195"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK47315.1"
                     /translation="MSESKDETVSKRLFQVWECRSCSVRFTQDVPGINDIAAYYESDA
                     YISHSETEKGFINKLYHVARSYTLASKKSLVQKNSSERNGSLLDVGAGTGAFAAYMRN
                     AGWTVKGLEPGPTARENAKKLHNIELEPAEHLFKLRSSSFDVITLWHVLEHVHSLHEY
                     MNAFRELLTNKGSLLIAVPNYTSYDATVYSGAWAAYDVPRHLYHFSPKSMRHLLHQHG
                     FKLTACKPMWFDSFYVSLLSERYITGKNRLLKAFITGFISNLHAFVKTQRCSSIIYIA
                     KK"
     gene            4661..>6507
                     /locus_tag="VEV83_19200"
     CDS             4661..>6507
                     /locus_tag="VEV83_19200"
                     /inference="COORDINATES: protein motif:HMM:NF014214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M36 family metallopeptidase"
                     /protein_id="HYK47316.1"
                     /translation="MRKALPIAGILTLLLFLPAMTQNTVDPSHIKQLVSQHAAKLGIG
                     FSDLQNYRVVSAYYDETTGLTMAYLQQTWKGVDVFNAIMSVAFKNENVGAFQSAWIAD
                     ADSKTKNVAFKPKIAAGTALRNALANISQPGMRPSWVALSRTADGQEFEYDNMGVALD
                     NIRVRLMWVPDHGNQDLLVLSWQVSLTTLKGNDSWLIDVDASGGRIVQKTNLTTKCTW
                     VARQQHNVYAYEVETFDDNVTDAPTDLESVAAVDSAKYLVIPYPYMDPDHKAPTLVAN
                     PWKINGNGLAYTKKWNSDATMDYKDSLKGNNVFAYEDENHDNKPGYSPASQTPLPVLT
                     WNYTRDLNIDPREDPALGIVNLFYWNNLMHDMSYEYGFNEAAGNMQTSNFGRGGKGSD
                     LVLSEAMDGGDTSNANFAPAVDGKKSRMQMFLWRPSPLKLLKFNSPTSFVGPKPAAES
                     AVSTNNKLASKGIITQNVVLYRDALHPDSSTACGAPSNAAQITGKIAYIDRGSCAFTV
                     KFQNAQSAGAKAIIVGNVAEDDPRYTDGSTGNVLVTMSASPLVNSINIPGVFIFYDTA
                     QRLKSFLLNNITTNATLSPTPMIDGDLDNGIPAHEYTHGISNRLTGGPTT"
BASE COUNT         1766 a         1445 c         1403 g         1893 t
ORIGIN      
        1 aatggttacg ttccctttca ttataccggt gatgtcatct aactgaccaa cagcaaaagg
       61 cttcacgatc gcaaggttta tgctgttgat cgccaggttg agatccatgc ggccttcgcc
      121 cgtataatat gttcccgtta agtgaacgtc gttattgtgc ccggtgagga ccacatctgc
      181 ggtgtaagca ttcgctgttt tgttgtcgac ctttatttgc agattaccga tgctgtccag
      241 cttataaacc aggttattca cctggatgtc tgatgtaaag accatttcac ccatcgggtt
      301 tgttatttcc gcggtgccat tgatcgttcc tgatgcaagc aaagaatcct ggtgtgcaag
      361 tttcgtgatc gttccgattt caaaattttt gagatcgact cgtatcggtg cggtcggaga
      421 gggcgatgtg ctgttgacag tgatcgactg cccaccctgg cttaaactaa ggttattaac
      481 aataacaccg gtcgaatcat attgaacaga attgttggga gacacattcc atttgctgta
      541 gtccaatgta aggtcaggct ttacgcttac cttaaatccg ctgccaacct ggttgagtaa
      601 tccgccgata gcatactgcg tcgtattttt tttgtctttt gaatcaagcg taaaatccaa
      661 ttgattattt gccaccgcgg ccgtcaatgc agtgcggtat aattgaaccg atgcactttt
      721 tgctccttcg atcgagacgt ctgcattgag cgcattgccc gcggtttgca cggttgcatt
      781 caagctgtca atttcataac cgcttgctac aagtttttga gtttgcaccg tcattcccaa
      841 atcgtttgag gcggtgttca aatgtgcctt caccgaaatg gaatcgctcc cttgtaatga
      901 aggagcgact tgtaacacta atccctccgt gcgaatagtt gcgttcagtt gccagttttc
      961 aggagaaata tttttctgct cataccccgg cacattgtaa tactggttga cggtttgctc
     1021 aacggcctgc cccatctcgg taagtttgta ctgaccgata agctccgcat ttatcgcatc
     1081 agattttacg acaatgctct tattatcggg cgtaccagat gccactaacg aaaggctgtc
     1141 cgtactgtag tgttggcttc cgctcgttac agaaagattg tttatatcga cggtcccaac
     1201 aagatcatca ggattggtgg aaggaagatc tgcaacaata tgcccgctca aactcaaagt
     1261 gtcagcagtt agattcaatg cttttgcatt cagggtatct atctgcatgt ctaatttcaa
     1321 aggcgggtaa gttgatctca gatctgcggt tacatcgagg tctactgaaa tgttcggatc
     1381 gtgaatactt gcagttgttt tgtcaacgcc attgtctatt gttccatttg ccacaagatt
     1441 tttatatgtg tatcctttta cctgtgccga taccacttcc aaagaatatt tggcattcgc
     1501 tttttttacg tcgaacccgg aaccacttgc ggtaaccttg gcggtgatca ccccaacgtt
     1561 ttgttgttgc ttaaacaaat agccagcatc aacattttgc aggtccgctt taacgttata
     1621 cgtgtcgcca cctttcattg tggcattcac attcgcgttg cctttgttcg tttttaatgc
     1681 gagctccgtt gaaaatgcat tcatacttcc tttaaaaaaa ccgctcgcag aaaagttatc
     1741 gggaagattc acatttgacg gaagtgattt cggcggaagc aagcttagga tatctgtttt
     1801 cgtagaagta aactggttga tctttacatt gtagtatgcg cgtttcgtgt ctggcagtcc
     1861 ttgcagtttg ccggataatt tcacgtatgt atgtccaaat ccactcattt caaatattgg
     1921 aatcgaaaga tcttttaaat atcctttcgc ggcagcattc actttgatca cggacaattt
     1981 ctgcgactgc aaatttctct tgtacgaggg catgaaggca atgatatcct tcacagcgat
     2041 gcgcgaattc attaggttca catctacata aatatctccc attctttttg aagctgcctc
     2101 tattgatgga tactttacga tcacatgatt ctgcaaaatg gtcgcatcag tttgcaccaa
     2161 taaattggta agtgaggcgc cgctgtcgct ataataaaac ttcgtatgga atttccgcag
     2221 gttcaaaccg ctttgctcat tgaaagcaag ctgatcgatg ttgccactga aaactgcggg
     2281 agtgaagttc aggctgtcgc catttagatt aaaattggtt atgtgaagat gactcggatc
     2341 gaatccttct ttaagacgcg gagcattatt atcgtcgtaa tgcaattcgt cgttgttgaa
     2401 actcactttc gtcaactgaa atttccatgg attattaagt tgactatctg ttttcgcagc
     2461 cacgacgtct tttgtttctt ttgcttcctg cgatttaccc aatgtaactt ttgtaaccgt
     2521 attgtttagt gtgagatcat ttaaactgat ggcgaggttt ttaaggtcga tattattcgg
     2581 atgtgtatta aaatccccaa tattgagatt tgcagcaatc gcagagacat cattcttata
     2641 atcaaacagc aattgcctgg aagaaatgct tccgatttct atcatcggat ttatggttga
     2701 cgttgcagga gacggagcgg gattaacgct gtccttattt tggataaggg gtttgtactg
     2761 ataaatgcgc gtgttgatat ttgagaccgc aatcgccggt atattgaaaa catatttata
     2821 cgggtcgaat gtcttgatgt ttgtttcaag gtttcccagg tagaaataac tatccattcc
     2881 actttcatca tctttgaatg tggccaggat atcgtgcaat ataattttgc cgatattaaa
     2941 tttaagaaga cttgtggtat ctactggtgc cgatgcctgt tgttcggtgg agaatgcctt
     3001 aacgatgtac tcgtaattaa agctcgtgtc agggttgatg cgggagatat gcatcttcac
     3061 gctgtcgagt tcgaggtatt gaacattcac ttcattactc aacaacttaa acaatgaaat
     3121 gtcaacacgc agttttcctc cgtataatag agtatctttt ttttggtctt caaaatatac
     3181 ttgttcgaga acgagacgct ttgggaaatc taaactcagt ttgccaattt caactttcgt
     3241 tttgatttta ttctgaatat acgaaacaac ctttcctttt gcataattct gcacgcccgg
     3301 gacctggatt agaatataaa ccagtaaaac caaaaaaatg aagatgccga ttatccaggc
     3361 aaataccttt aagacccttc gtgcaataac ctttgctttc aatcagtgac ctttttttta
     3421 tttaaactaa ccgcagcgga gtccggcttg atagtttccg gttttcggcc cgactggaat
     3481 aagaaaacag tacaagccaa tactaataag gtttcaacaa gaccaacgac ttcataaata
     3541 aagatcccaa ttagccagcc ggttatcaac ataaccgcaa ttacatagaa tacgtttttc
     3601 ataaattatc atcgtcatgc tttcaatcaa cgcttttctc attactcaaa atacagtagg
     3661 cagatacaat gccaaatcta ttttttcgcg atataaataa tagaactgca tcgctgcgtt
     3721 tttacaaaag cgtgcaaatt tgaaatgaag ccggtgataa aagcctttag taacctgttc
     3781 ttgccggtga tgtaacgttc gcttaacagg ctcacataaa aactgtcaaa ccacataggc
     3841 ttacatgccg tcaatttgaa accatgctga tgcaataaat gcctcatgct ctttggcgag
     3901 aaatgataca agtggcgcgg cacgtcataa gctgcccatg cgccggaata aacagttgca
     3961 tcgtagctag tgtagttcgg tacagcaatc agcaaagaac ctttattcgt caataattca
     4021 cgaaaagcat tcatgtactc gtgcagcgaa tgaacatgct ccagcacatg ccacaacgta
     4081 attacgtcaa aagatgagct acggagtttg aacagatgct ccgcgggctc cagttcaatg
     4141 ttgtgaagct ttttcgcatt ttcgcgcgcg gttggccctg gctccaaccc ttttacggtc
     4201 cagcctgcgt ttcgcatgta tgcggcaaat gcgccagtgc ccgcccctac atcaagcaaa
     4261 ctgccatttc gttcggagga atttttttga accaggcttt tcttcgacgc cagtgtatac
     4321 gatctcgcta catgatatag tttattgata aagccctttt cagtttcgga atgcgaaata
     4381 taggcgtcgg attcataata tgcagcgata tcgtttatcc cgggaacgtc ttgcgtaaaa
     4441 cgaactgaac aggatctgca ctcccacacc tggaacaatc ttttgcttac ggtctcgtcc
     4501 tttgactcgg acactgcaac cagatcatcg ctgttgcata ttggacagtt cgtgtaatgg
     4561 accacgttca tttgtatgca aagaaaagac tatgtgtatt gacgaaatga aaaaagtaac
     4621 tgcacaataa aatttcaata tattgctcaa aaaatcttct atgagaaaag ctctacccat
     4681 tgcaggcatt ctaaccttac tcctcttttt gcctgcgatg acgcaaaaca ctgtagaccc
     4741 cagccacatt aaacaactgg tgtctcaaca tgctgcaaaa ctcgggatcg gatttagtga
     4801 ccttcaaaat tatcgtgtgg tcagcgccta ctacgatgaa actaccggtc taacaatggc
     4861 gtacctgcaa cagacctgga aaggtgttga cgtcttcaat gcaatcatgt cggttgcttt
     4921 taagaatgag aatgtcggcg catttcaatc tgcatggatc gctgacgcgg attcaaaaac
     4981 taaaaacgtt gcattcaaac ctaagatcgc tgctggtacc gcgctaagaa atgcactggc
     5041 taacattagc cagcctggga tgcggccatc atgggtggcc ttaagccgca cggccgatgg
     5101 acaggaattt gaatacgaca acatgggtgt tgcactcgat aatatccgcg tacgtctcat
     5161 gtgggttccg gaccacggga accaggacct tcttgtactc agctggcaag tttctttaac
     5221 gacactcaaa ggcaacgaca gttggcttat tgatgtggac gcatcaggcg gaagaattgt
     5281 gcagaagaca aaccttacca caaaatgtac atgggtagcg cggcagcaac ataatgtgta
     5341 cgcctacgag gttgaaactt ttgacgataa tgtgactgac gctccaacgg atcttgaaag
     5401 cgtggctgcc gtcgacagcg caaaatatct ggttattcct tacccatata tggatccgga
     5461 tcataaagca ccgacattgg ttgcgaatcc ctggaagata aatggcaatg gacttgcgta
     5521 cactaaaaaa tggaattcag atgcaaccat ggattacaaa gacagcctta aaggaaacaa
     5581 cgtttttgcg tacgaagatg agaaccacga taataagcca gggtattcgc cagcttccca
     5641 aacgccgctc ccggttttaa cctggaatta cactcgggat cttaatatag atccgaggga
     5701 agatcccgcc cttggcatag tgaacttgtt ctattggaac aatttgatgc atgacatgag
     5761 ctacgaatat ggctttaatg aagcagccgg gaatatgcaa acatcaaatt tcggacgtgg
     5821 cggaaaagga agtgacctcg tgttgtcaga agctatggat ggtggcgaca caagtaatgc
     5881 aaattttgcg cccgcagttg acggtaagaa atcgcgcatg caaatgtttc tctggaggcc
     5941 gtccccgttg aaacttctta aattcaattc tccaacttcg ttcgttggtc cgaaaccggc
     6001 cgcggaaagc gcagtcagta ctaataataa actcgcttcg aaaggtatca tcacgcagaa
     6061 tgttgttttg tatagggacg cgcttcatcc agactcgagc actgcttgtg gggcaccttc
     6121 gaatgctgcc cagatcaccg gcaagatcgc atatatcgac agaggttcgt gcgcattcac
     6181 tgtcaaattt cagaatgcgc aatctgcagg agcgaaggca attattgttg gcaatgttgc
     6241 tgaggatgac ccgagatata cagacggcag cacgggtaac gtgcttgtaa caatgtccgc
     6301 ctctccactc gtaaatagca taaatatacc gggcgttttc atcttctatg atacggctca
     6361 aagattaaaa agctttttgt tgaacaatat aactacgaat gctacattgt ctccaacgcc
     6421 gatgatcgac ggagatcttg ataatggcat tcctgcacat gagtacacgc acggaatttc
     6481 taaccgcctc accggcgggc ccactac
//
LOCUS       DASQJI010000716         5834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2098942,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000716 DASQJI010000000
VERSION     DASQJI010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2098942"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VEV83_19205"
     CDS             <1..670
                     /locus_tag="VEV83_19205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47317.1"
                     /translation="KEEQFGDMPAANPYRVIGVVNNMKDKSDYQAIEGGMYLKMDTGS
                     MRWTGNILLKVKPGTDAAFEAKLFKSVSNAVGSTVEIEHLDKKLATKNKVMIVPLIIA
                     LIVVGFLIINVALGLFGVLWYNINKRRGEIGLRRAVGATGNSVSKQLVGEAMVLSTFA
                     LLVGSFFAVQFPLLNVFDLPASVYISALILAVLFVYVLVIICALYPGKQAAAIYPAVA
                     LHEE"
     gene            1027..1767
                     /locus_tag="VEV83_19210"
     CDS             1027..1767
                     /locus_tag="VEV83_19210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47318.1"
                     /translation="MIPGLPLNISISFMLVALITVWALYEATNRSRTLLIIAAIWLVV
                     QTILGLSGFYMVTNTIPPRFALLGLPPLVLIIAVFATAKGRRFVDSLNLKKLTFLHTI
                     RILVEMMLLNLSIHKLVPQLMTFEGRNFDIISGVTAPFMFYLVFVKRVLGRKVLLVWN
                     IICLGLLLNVVINAVLSLPSAFQQFAFDQPNVAVLYFPFVWLPCCIVPIVLFAHLAAI
                     RQLLNKNKFEDSLRVTLMNQRNVAKTEG"
     gene            complement(1808..2800)
                     /locus_tag="VEV83_19215"
     CDS             complement(1808..2800)
                     /locus_tag="VEV83_19215"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HYK47319.1"
                     /translation="MQKVQHIIGADLSKKTIDLFYWSTKSHLDIKNNSEGFKTLLGSI
                     KQQRIDRSELMIVMEHTGLYSFCFEEFLHKHQIPFCKVSALMIKRSLGLVRGKSDKID
                     ARRIASYGFEKRDTLLPEPATSKELKRLQLLYSTRERLVKQRAGLINAVKEYRSIGLS
                     TNDPILQSQQRLIKHFEKEIAKLEAEMDIIFSSDACLQKNQQLLQSIKGVGKVVSTAT
                     IIKTKNFTRFTDPRKFACFCGTAPFEHTSGSSIRGRTRVSHLADKQMKTLMDLSAKSA
                     IQYDKELREYYLKRIGNGKSKMSTINIVRNKILYRMFAVIKRQTPFIENYLQTA"
     gene            complement(3541..3963)
                     /locus_tag="VEV83_19220"
     CDS             complement(3541..3963)
                     /locus_tag="VEV83_19220"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK47320.1"
                     /translation="MKPLLFLTAIFFWLHTSAQDSTASTQDTADYDKEFLEVQVPAKF
                     PGGDQGWNNFLSANIRTQTPARHKAPAGSYTVVIRFTIDKEGNVKDAAVLEDPGYGTA
                     EDVLRVLHKSPRWTPAMQDGRNVIYVQKQKITYEVTQN"
     gene            complement(4037..4987)
                     /locus_tag="VEV83_19225"
     CDS             complement(4037..4987)
                     /locus_tag="VEV83_19225"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYK47321.1"
                     /translation="MRSSLLYILLPLCVGVHAQHIERYYDYLRRPCGPVTARFYSEMN
                     KKDSVWERKDYFIHERSLEMHGYYIDTACKIPHGNFQFFYPNKHLASAGLCDHGKKEG
                     LWLTFYPNGMIEDSVTYLHGNKTGTSYSWHPNGYMRDSAVWNADGSGVEVSWFDNGNP
                     SSAGRYSAGYKLNGDWQFFHKNGRLSALETYHDSVLTASKYFDEEGNGVGDTAIVERK
                     ASFPGGSKAWIKYLNKHVYFPDRYKFENADSAIVVIAAVVDEDGNVTDVEVNTPLYPA
                     FDDIALNAVKKSPRWIPAMQHNRRVKYRFLQAVYFLQDEQ"
BASE COUNT         1575 a         1226 c         1284 g         1749 t
ORIGIN      
        1 aaaagaggaa cagtttggag atatgccggc tgcgaatccg tacagggtta tcggtgtggt
       61 aaataatatg aaggataaaa gcgactacca ggcgattgaa ggcggaatgt atttgaaaat
      121 ggatacgggc tcgatgcgct ggacgggtaa catccttctc aaggtaaagc cgggcactga
      181 tgctgcattt gaagcaaaac ttttcaagtc agtttcaaat gcggtaggtt ctacggtcga
      241 aattgaacac cttgataaga agcttgcgac gaaaaacaaa gtgatgatcg tgcctttgat
      301 catcgcgttg atcgttgtgg gatttcttat catcaatgtt gcgctgggat tgtttggcgt
      361 gttgtggtat aatattaata aaaggagagg agagatcggt ttgcgacgcg ccgtcggtgc
      421 gacagggaat tcggtttcaa aacagctcgt gggcgaagcg atggtgcttt caacatttgc
      481 attgctcgtt ggttcgttct tcgcggtgca gttcccgtta ctcaatgtgt tcgatctgcc
      541 tgcaagcgtt tatatctctg cattgatcct tgctgtgtta ttcgtttatg tactggtgat
      601 catttgcgca ttgtatccgg gcaagcaggc tgcggcgatt tatcccgcag tggcgctgca
      661 tgaggagtag tgtctgacac ttccaaagtg tctgacacct ttgcgttact ttcggcagaa
      721 attggaaagc ggtttggcat ggaacagatt aaatgcatga aagtgatttt gcgccatgca
      781 cttcgtgtca tacatcgtgg tcttcgtgca cgcgaaataa tggaacacga agagcacgaa
      841 gaaaacacaa tggacacgaa gacatgtttc aatagcaata agcacataaa atttccaccg
      901 tgacatttct atagagagcg gtaacaggca actgccaact atgtgttcaa cacatgttct
      961 ctcgcgcgtg tgtcgttcga acaaggccgt cgaaagtttt tccgaccttt gccgcaaaat
     1021 aattttatga tacccgggct gccattgaat ataagtatct ccttcatgct cgtcgcgctt
     1081 ataaccgtgt gggcgctgta cgaggctacg aaccgttcga gaacactttt gatcatcgct
     1141 gccatttggt tagtggtgca gacgattctt gggctgtctg gtttttacat ggtgactaat
     1201 acaatcccgc cgaggtttgc attactggga ttgccgccgc tcgttcttat catcgctgta
     1261 tttgcgactg caaagggcag aagatttgta gatagtctga atttgaaaaa gctcacgttt
     1321 cttcatacga taaggatact tgttgaaatg atgctgctca atttatcaat ccacaaactt
     1381 gtaccgcaac tgatgacatt tgaaggaaga aacttcgata tcatctcggg cgtgacggcg
     1441 ccatttatgt tttacctggt gtttgtgaag cgtgtcctgg gaagaaaggt tttactcgta
     1501 tggaatatta tttgtcttgg attattgttg aatgttgtga tcaacgcggt gctgtcgctt
     1561 ccttcggcat ttcagcagtt tgcatttgat cagccgaatg tcgcagtttt atattttcct
     1621 tttgtgtggc tgccttgttg tatcgtgccc attgtgttat ttgcgcacct cgctgcaata
     1681 aggcagttgt tgaataaaaa taaatttgaa gattcgctgc gcgttacgtt gatgaatcag
     1741 agaaacgttg cgaaaacaga aggctaacat tgtgtattct aagacttaca aattgccaaa
     1801 aaacttttta ggccgtttgt aaatagttct cgataaatgg agtttgtcgt tttatgacgg
     1861 caaacatcct gtataagatc ttatttcgaa cgatattaat ggtgctcatt ttcgatttgc
     1921 catttccaat tcgtttcaaa taatattctc taagttcttt gtcatattga attgcagatt
     1981 tagccgatag gtccatgagt gttttcattt gcttgtccgc caggtggctc acacgggtgc
     2041 ggcctctgat gctgcttccg gatgtatgtt caaagggcgc cgttccgcaa aaacaagcaa
     2101 attttctcgg atcagtgaac cgggtaaaat ttttggtttt aataatggta gccgtagaca
     2161 ctactttacc aacgcctttg atactttgca atagctgttg atttttctgt aagcaagcat
     2221 cactgctaaa aatgatatcc atttctgctt ccaatttcgc aatctctttt tcaaagtgtt
     2281 tgatcagccg ctgctgagat tgcaagatcg ggtcattggt tgataggccg atgctacggt
     2341 attctttgac ggcattaatt aaaccagctc tttgttttac caggcgctcc ctggttgaat
     2401 acagcagctg caatctttta agctccttgc tcgttgcagg ttctggcaaa agcgtgtctc
     2461 ttttttcaaa tccgtagctg gcaattcggc gggcatcaat tttatcagat tttcctctga
     2521 caagcccaag ggaccgtttg atcattaaag cactcacttt gcaaaaaggg atttgatgct
     2581 tatgcagaaa ttcctcaaaa caaaagctgt atagaccggt atgctccatc acaatcatta
     2641 attcagaacg atcgattcgc tgttgtttaa ttgatccgag taatgtttta aagccttccg
     2701 aattgttctt aatgtccaaa tgactcttgg ttgaccaata aaataaatcg atcgtttttt
     2761 tggaaaggtc ggctccaatg atgtgctgaa ctttttgcat agctttgttt ttaggactta
     2821 aaaaagaggt tgctgagcct aagaccttta attagtcttt aaggacttac tattctaact
     2881 aggcctaagc aaccgtggat gggaggtggg gactgataca caaaatagat cttatcatct
     2941 ataccttcgt aaagttcacc ccacttcctt ccacaaatta tttattcctc gcatctgctt
     3001 ttcagtatat caaagaacta tttttaatct aaaggctctt tgtgcccgaa aaaaattcct
     3061 gcgagagctc catgatttca gcgtgaggag taacaaaaaa aacaatcctc catcaattat
     3121 tttattatgc aagttttgaa taacatttac agcgtggacc gtcgacaaac tcgaaaagcc
     3181 ttttaaataa ccagcagcca ttatgtgcag taatgcgtcg cagattcctc gttggaaagt
     3241 ttcagtctct atagaatgcg tatttactcg gaatgacaga gcattgcgtc agtaatgcgt
     3301 cgcagattcc tcgttaggaa actttcagtc tctatagaac gcgtattcac tcggaatgac
     3361 ggagcattgc gtcaataatg cgtcgcagat tcctcgttag gaaactttca gtcgcgtcag
     3421 aatgcgtatt tcctcggaat gacagagcac tgcgtcacta atgcatcgca gattccgcgt
     3481 tacgaaactt tcagtctcta tagaacgtgg ttcacgcgga atgacagtcg ccgcccatca
     3541 tcaattctga gtaacctcgt aagttatctt ttgcttctgc acgtagatca cgtttcttcc
     3601 atcttgcatt gcgggtgtcc agcgcgggct tttatgcaac acacgtaaca catcctctgc
     3661 ggttccatat cccgggtctt caaggaccgc cgcatctttt acgttccctt ctttgtcaat
     3721 ggtaaaccta ataactaccg tgtagcttcc agccggcgct ttatgccggg caggcgtttg
     3781 cgttcttatg tttgcggaga ggaaattatt ccatccctgg tctccaccgg gaaatttggc
     3841 cggaacttgt acctctaaaa attctttatc ataatcagca gtgtcctgtg ttgaagctgt
     3901 actgtcctgc gcagatgtat gcagccaaaa aaatattgcg gttaaaaaga gtagaggttt
     3961 catgcagttg tttttaacgc aataaagcta aacaatccgt tttatgtata gcgcatagag
     4021 tacaaggagc aaggtactat tgctcatcct gcaaaaaata cactgcctgc aggaagcgat
     4081 atttaacgcg ccggttatgt tgcatggcgg gtatccacct tggagatttt tttactgcgt
     4141 tcagcgcgat atcgtcaaag gctggatata acggtgtatt tacttcaaca tctgttacat
     4201 tgccatcttc atcaaccaca gccgcgatca ctacgatagc ggaatcagca ttctcaaatt
     4261 tataccgatc gggaaaataa acatgcttgt ttaaatattt gatccaggcc tttgaacctc
     4321 cggggaaact ggcctttctt tctacaatcg ctgtatcgcc aacaccatta ccctcctcat
     4381 caaaatactt gcttgctgtg agaacgctat catgataagt ttcaagtgca ctcaacctgc
     4441 catttttgtg gaaaaattgc caatcgccat tcagtttata gcccgcacta tacctgccgg
     4501 cagacgaagg atttccatta tcgaaccacg acacttcaac accacttcca tcagcattcc
     4561 atacggcaga atcgcgcatg tagccattcg gatgccagct atagctggtt cctgttttgt
     4621 taccatgcag gtaagtaaca gaatcttcta tcatgccgtt gggataaaaa gtcagccaga
     4681 gcccttcctt ttttccgtga tcgcataaac ctgctgatgc aagatgctta ttgggataaa
     4741 aaaattgaaa attaccatgt ggtattttgc aggctgtgtc gatataatag ccgtgcatct
     4801 ccaggcttct ttcatgaata aaataatctt tccgttccca aacggaatcc tttttgttca
     4861 tttcactata aaatcttgcc gttacaggtc cacagggccg acgcagataa tcgtaatatc
     4921 tttctatgtg ctgtgcatgc acaccaacac acaacggtaa taaaatataa aggagagatg
     4981 atctcatatc ttgaaaagtt tgtggctatg cttgctatac cagctggcct tcaattgagc
     5041 aagtcgccag tatcactaca aaagatacac agttttctca ttccttattt gacgtttttt
     5101 atttgttatg ggaaataaga aatggaaagt aagaaagaat gttgctaaca ttggcgagct
     5161 ggacgccggc gtttagatgc acaagttgct attgtgccac aaaatatttt acgaaagaaa
     5221 gaactctgga atgagatccc cgttttcacg gggatgacgt tcgagaggtt gaatgaattt
     5281 taagacgttc ttgaagaacg agcggccttg cacagccaag gatgaaaaga tttatttcgg
     5341 ttcttcgagt tagtcctcag ggctcaaacg ctgaagccac agtagcaccg aagccaaatc
     5401 aaggcgtgtg cacgaatgtg ctgaaatcga cgaaggagat tcgcgaacac cttttaaaat
     5461 aatttatgca gtgagcaatt atcatccgtg cttgaacttt ttggtacttt ttctttcaag
     5521 agaaaaagta cacaaacaaa aaatgcacta caaaaacaaa agcttttaat aatgagatcc
     5581 ccgtattcac ggggatgacg tgcaagaggc ggagtaactt taaaacgatg atgagggagg
     5641 cggcattcgg tcgcatagca atgaaaaatt tagttcgctt cttcgactta gggatcaagg
     5701 gactatggcg ccacgtgcga ctcaggggcg tttagttacg ggagtgtcta ttgttgcaca
     5761 aggatagttt gcaaattttg tgaatcgccg atggcgatgc caccaacaac accgctttca
     5821 atttaatagc agac
//
LOCUS       DASQJI010000717         1975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_100519,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000717 DASQJI010000000
VERSION     DASQJI010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100519"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(265..1029)
                     /locus_tag="VEV83_19230"
     CDS             complement(265..1029)
                     /locus_tag="VEV83_19230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47322.1"
                     /translation="MSTQNKIALVTGGSRGLGRDMALRLADYGNDVIITYHSREQDAE
                     AVAAEIESKGKKAAVLQYDSSHFESLNPFLQLVSQTLSEKWKTDKFDFLINNAGIGAT
                     IPFTQVTEEDFDKFLNIHFKSIYFLTQRALPMMNDNGRIINISTGTTRFANPGYSVYA
                     SMKAAIEVLTRYIAKEIGSRGITVNVVAPGPIETDFNNAAIRNNPERKKILGNLTALG
                     RTGVAEDIGGVVAFLCAEDARWINGQRIEVSGGINL"
BASE COUNT          540 a          462 c          438 g          535 t
ORIGIN      
        1 gccgctcctc cgagtttcag ccagcaccat cgcagcttcc cttcatcgat ccaatgatgg
       61 atcatttcac agccaaggcc atcgacataa aattttagtg actgttcgat gctcgctaca
      121 acaaaaaaag gaacagcctg ctttacgttt gattgaattt gagttgcgtc catcacttct
      181 atttcgatcg cattaattga tcagcatttt ttgagcgcac ttaatcgccc gcatgaatta
      241 ttgcggtaca aaagtgtctt tcatttacaa attgatcccg cctgacactt cgatccgttg
      301 gccgtttatc catcgcgcgt cttctgcaca taagaatgca actacgccgc cgatatcttc
      361 agcgacgcct gtcctgccaa gcgcagtaag attgcccagt attttttttc tttcaggatt
      421 attgcggata gctgcattat taaaatcagt ttctattgga cccggggcaa caacattcac
      481 cgtaataccc cttgagccta tttctttcgc tatgtacctc gtcagcactt cgatcgccgc
      541 tttcattgaa gcatacactg aatagcccgg attcgcaaat ctcgtggtac ccgttgaaat
      601 attgatgatg cggccattat cattcatcat cggcagtgcg cgttgggtga gaaagtaaat
      661 acttttaaaa tggatgttca ggaatttgtc gaaatcttct tctgttacct gcgtgaacgg
      721 aatcgttgcg ccaatacctg cattgttgat caaaaaatca aacttatctg tcttccattt
      781 ttcgcttaat gtttgcgaga cgagttgcaa aaaaggattg agcgattcaa aatgagatga
      841 gtcatattgc agcaccgccg ctttttttcc ttttgattct atctctgccg caactgcctc
      901 tgcatcttgt tcgcgcgagt gataagtgat gatcacatcg ttaccataat ctgctaaacg
      961 aagagccata tccctgccga gcccgcggct gccgccggta acgagtgcta ttttattttg
     1021 tgttgacata ggattttttt attgtaaatg agcgtgcaaa aataaacagt ttagtttggt
     1081 aaccgttatc gagaagcagc taaagtggat tggaacaagc gaataaggtt ggctgctgtg
     1141 tgatgcgcgg gtgttactaa ggtcataagg tttacaaagg atgatcattt gaaaaccgca
     1201 cgtgaaacgc gaaggcacga gatccgaatg cacagctcat gcgaaacttg ttctcaattc
     1261 ggcgtagtac tgcgagcccc taaggggcgt tatccgaata accgggatac catcggggga
     1321 cgaccatcga tatagttaaa cagaacccga agggttcaac gtcgttaaac ggtctcaaac
     1381 ttttttaaac gaagcgccca ctttttatgc gcacttgttg ccaatttcga tgtaagactg
     1441 taagcccgga aggggcgtta tccgaataac cgcggatgaa atccgcggat gatgggcaag
     1501 gtgaaacaga accggaaggg ttcaatgtca ttcaagacga tcgcaaacgt tttaaacgaa
     1561 agcatgcaca cttatgaatg atcccaaatc attttaatca agcatacaca gctgatgcga
     1621 aacttgcctt cgattcgggt agtactgcaa gcctggaagg cgtcatctta ataaccgcag
     1681 atgaaatggc cggacatgca caagaccggt gaacagaacc tgaagcgttc aatcgatcaa
     1741 acgatcgcaa acgttttaaa ctaaacgatg cgcttcctat gcgcacttgc gtcaatttcg
     1801 gcgtactact acgggccccg aaggggcgtt atccgaacaa cccccgataa gatcggggga
     1861 cgagcaccga tctcgttaac ggaacccgtt tcccgttttc agtcccgtga tcaaacggca
     1921 atcaaataaa atgaggctca ataatttttg tgatgaacac agcactttgg aaggg
//
LOCUS       DASQJI010000718         3756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1176587,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000718 DASQJI010000000
VERSION     DASQJI010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176587"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VEV83_19235"
     CDS             complement(<1..573)
                     /locus_tag="VEV83_19235"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HYK47323.1"
                     /translation="MRLFSTIPAFLFFFSFPQKKGHCNTTALVLLLLALNLAAAFKAS
                     AHTLQVGQCQRIKTIQQALQLAQNGDTILVYPGVYKEGAFIIKKSLCLKGIGLPVLDG
                     EKKYEIVNIQSSNVTIEGFKLVNSGMSDVYEMAGVKIGNAANVIVRNNRFENNFFGIY
                     VQYSVKCSITGNVVQSDPRPSYELGNAIHCF"
     gene            complement(570..1610)
                     /locus_tag="VEV83_19240"
     CDS             complement(570..1610)
                     /locus_tag="VEV83_19240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47324.1"
                     /translation="MNSQRLPGWMRITTIIIGLALFAALYLPIWRIELSAPQYPEGLV
                     LLIYASKLGGNVDIINGLNHYIGMKTLHTEDFIEFKILPYIIGALALLTFIAGLVNRK
                     KIFFGLVVVFILTSILTMADFWRWEYNYGHNLNPEAAIIVPGMAYQPPLIGYKQLLNF
                     AAYSIPDSGGWIYVGAAVLLTAFAIYELIRAKQKGKPAKKNRRSSIPAAALFVGCFII
                     FFSCATKTQPFQLGKDNCDYCRMTISDARFGGEIITSKGKAYKFDDMHCILSFLKAGS
                     ADTTSSRFFLVDFTTHQLQPASNMFILRSDALRSPMQGNMAAFTSKENLTQARQRFNG
                     STFTWNEALHIQ"
     gene            complement(1647..2213)
                     /locus_tag="VEV83_19245"
     CDS             complement(1647..2213)
                     /locus_tag="VEV83_19245"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HYK47325.1"
                     /translation="MKTSAILFSLSMTIALFSCNQNKEAQTQTTVAEPVAATGGQENV
                     QDDESEKNVVKVAMSSKDHTTLVAAIKQAELITALSNAGPFTVFAPTNEAFNKLPAGT
                     VESLMKDDKKADLQNILQYHVTLSAMKAESFHDGQILGMVNGDNVTVNVKDGKVTLNN
                     SAHILASIPASNGMIHVIDAVLLPPEKK"
     gene            complement(2272..>3756)
                     /gene="nosZ"
                     /locus_tag="VEV83_19250"
     CDS             complement(2272..>3756)
                     /gene="nosZ"
                     /locus_tag="VEV83_19250"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HYK47326.1"
                     /translation="IVAGTRFSVPLDNENGDVPINTYKQNFKGTVSFIHIDPATGGMK
                     LGFQVVLPGIDFDLAHTGKGPSEGWFFFSCYNTEQANTLLEVNASQRDKDFILALNWK
                     MAAQLVQQGKGTTQPAKYAHNVYDENAHSATSTIETQTILLDAKQFPGLAYFIPCPKS
                     PHGCDVDPTGNYIVGSGKLAALIPVFSFDKLQKAIAAKDFDGEFGGIPVVKYASALYG
                     EVQKPGLGPLHTEFDGQGNAYTSFFVSSEIVKWNIKDLKVLDRAPCYYSIGHLCVPGG
                     DTKHPDAKYVIAYNKITKDRYLPTGPELAQSCQVFDISGGKMELILDFPTVGEPHYAQ
                     AIAADKIRNNSVKFFKIEDNKNPFVTKGEGEAKVVRTGNKIDVYMTAIRSHFNPDNIE
                     GIKLGDEVYFHVTNLEQDWDIPHGFAVKGNPNAELLVMPGETQTLKWVPDKVGIYPVY
                     CTDFCSALHQEMQGYVRVSAAGSSVALSFSTGTNLPKQDTVAAK"
BASE COUNT         1008 a          844 c          797 g         1107 t
ORIGIN      
        1 gaaacaatga atcgcgttgc cgagttcata cgaaggtctt ggatcagact gaacaacgtt
       61 gccggtgatg gaacatttca cactgtattg cacataaatt ccgaaaaaat tattttcgaa
      121 cctgttgtta cggacgatca cattcgctgc attgccgatc tttacaccgg ccatttcgta
      181 gacatccgac atgccggagt ttaccagctt aaatccttca atggtcacat ttgatgattg
      241 aatgttgacg atctcgtatt ttttttcacc gtcgagcacg ggcagaccaa tgccttttaa
      301 gcaaagcgat ttcttaatga tgaatgcgcc ttctttataa acacctggat acaccaaaat
      361 cgtgtccccg ttctgtgcca attgcagtgc ctgttgtatg gtttttatcc gttggcattg
      421 cccaacctgt aacgtgtgcg ctgacgcttt gaaagctgcg gcaagattaa gagcaagtaa
      481 taatagaacg agtgcggtcg tattgcagtg tcctttcttc tggggaaatg aaaaaaagaa
      541 taaaaacgcg ggtatggttg aaaataatct cattgtatat gcaacgcttc attccaggtg
      601 aaggtgctac cgttgaatcg ctgacgtgcc tgggttagat tttcttttga ggtgaatgcg
      661 gccatgttgc cctgcatggg gcttcttaaa gcatcgctcc tgagaataaa catgtttgat
      721 gcaggctgta gctgatgggt tgtgaaatcg acgagaaaga aacgactgct cgttgtatca
      781 gcacttccag ccttcagaaa ggaaaggatg cagtgcatat cgtcgaactt atatgcttta
      841 ccttttgatg taattatttc ccctccaaac cgcgcatcac tgatggtcat gcggcaataa
      901 tcacagttat cttttcctaa ctgaaatggc tgtgttttgg tggcacaaga aaaaaatatg
      961 ataaaacatc cgacaaatag tgcagccgct ggaatagagc tgcgcctatt tttttttgcc
     1021 ggctttcctt tttgttttgc tctgatcaac tcatagatcg caaacgcggt aagtaataca
     1081 gcggcgccca catagatcca tccacccgaa tcagggatcg aataggcagc aaaattcaac
     1141 agttgcttat accctatcaa cggtggctga tacgccatgc cgggaactat tattgctgct
     1201 tcaggattca aattgtgacc gtaattgtat tcccacctcc agaaatctgc catcgttaga
     1261 atggaagtga ggataaacac gacgaccaat ccaaaaaata ttttcttcct gttaaccaaa
     1321 cctgcaatga acgtaagtaa tgcgagagcg ccaatgatgt atggcagaat tttaaactcg
     1381 atgaaatctt ctgtatgcaa agtcttcatc ccgatataat ggttcagccc gttaatgata
     1441 tcaacatttc ccccaagttt gcttgcgtat atcagtaata ccagcccttc cgggtattgc
     1501 ggggccgaaa gctctattct ccaaatcggc aaatacaagg ctgcgaataa agcaagcccg
     1561 ataatgatcg ttgtgattct catccatccc ggcaatctct gtgagttcat atgctgctct
     1621 ttcaacatta aaaaattcag ccgttattat tttttttcag gcggcaacaa aacggcatcg
     1681 atcacatgta tcattccatt ggatgcagga atggaggcaa ggatgtgcgc agaattatta
     1741 agtgtcactt tgccatcttt cacattcaca gttacattat ctccgttcac catcccaagt
     1801 atttgcccgt cgtgaaaact ttccgccttc atcgcagata aggttacatg gtactgcaaa
     1861 atattttgca ggtctgcttt tttatcatct ttcattaatg attcgactgt gcctgccgga
     1921 agtttattaa acgcttcatt tgtcggagca aaaaccgtaa acggaccagc gttcgaaaga
     1981 gcggtaatga gctctgcctg ttttatcgca gcaacaagtg ttgtgtgatc ttttgatgac
     2041 atcgcaactt ttacaacgtt cttttcagat tcatcatcct gcacattttc ctgtccgcct
     2101 gttgcggcta ccggttcggc aactgttgtt tgtgtttgcg cttctttgtt ttggttgcaa
     2161 gaaaaaaggg cgatcgtcat tgataaggaa aataaaatcg ctgaagtttt catacaaaat
     2221 cattttcaga cccggcaggt tcttaagcct gccaggtctt tgtgaaaaat tttatttggc
     2281 tgccaccgtg tcctgcttag gcaaattcgt tcctgtactg aagcttaaag caacggaact
     2341 acccgccgcg gatactctca catatccctg catttcctgg tgaagcgcgc tgcagaagtc
     2401 agtgcagtaa acaggataaa tgccaacttt atccggaacc cattttagtg tttgcgtttc
     2461 gccgggcata acaagtaact cagcattggg attacccttt actgcaaaac catgcggtat
     2521 atcccagtcc tgttcaagat ttgttacatg gaaatatact tcgtcgccca acttgatccc
     2581 ttcaatatta tcaggattga aatgtgagcg tatggcagtc atatacacat caatcttatt
     2641 tccggtgcgc accactttcg cttcaccttc gcctttggta acaaaaggat ttttgttatc
     2701 ttctatttta aaaaacttaa cgctattgtt gcgaatttta tctgcggcta ttgcctgggc
     2761 atagtgcggt tcgccgactg ttggaaaatc aagtatcagt tccattttgc cgccgctgat
     2821 atcaaatacc tggcagctct gtgcaagttc ggggccagtg ggtaagtaac ggtctttcgt
     2881 gatcttgtta tacgcgatca catattttgc gtccggatgt ttggtatcac cgcccggtac
     2941 acaaaggtga ccaatagaat aataacacgg agccctgtca agaaccttca gatccttgat
     3001 attccatttt acgatctcag aagaaacaaa gaaagatgtg taagcgttac cctgcccatc
     3061 aaattctgta tgcaaaggac caaggccggg cttctgaact tcgccatata atgcagatgc
     3121 atattttaca accgggatgc cgccaaattc tccatcgaaa tcttttgcag cgatggcttt
     3181 ttgcagttta tcaaaactga aaactggaat taatgcggca agcttgcctg aaccaacgat
     3241 gtaatttcct gttgggtcaa catcgcagcc atgcggagat ttaggacatg ggataaagta
     3301 agcaaggccg ggaaattgct ttgcatcaag aagtatggtt tgtgtttcga tggtgctggt
     3361 tgcactatgc gcattttcat catacacatt atgcgcatac ttcgcaggtt gtgtagtgcc
     3421 cttgccctgt tgcaccagtt gcgctgccat tttccagttg agtgcaagaa taaaatcttt
     3481 atcgcgctgc gaagcattca cttcaagcag tgtgtttgcc tgttctgtat tgtagcatga
     3541 aaaaaagaac cagccttcag aagggccttt gcctgtatgc gcgaggtcaa aatcaattcc
     3601 gggcaataca acctggaagc caagtttcat acctcccgtc gccggatcaa tatggatgaa
     3661 acttactgtt cccttgaaat tttgcttgta agtattaata ggcacatcgc cgttttcatt
     3721 atccaatgga acgctgaacc gtgtaccagc tacaat
//
LOCUS       DASQJI010000719         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2560677,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000719 DASQJI010000000
VERSION     DASQJI010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2560677"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            596..1183
                     /gene="gmk"
                     /locus_tag="VEV83_19255"
     CDS             596..1183
                     /gene="gmk"
                     /locus_tag="VEV83_19255"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HYK47327.1"
                     /translation="MPAFSKKLIIITAPSGAGKTSVTKYLLTKMPELAFSVSITTRKP
                     RIDETNGVDYYFVSEEEFHQKIREDAFIEWEMVYEGKYYGTLKTELERIWTQEKIPLL
                     DIDVKGAIRVHEQFDENCLTIFIEPPSVEELQKRLTARGTESLESIQTRLDKAKYELS
                     FRHSFNEIIVNDVLQDACEKTERVVRDFLGIQVDS"
     gene            complement(1300..1680)
                     /locus_tag="VEV83_19260"
     CDS             complement(1300..1680)
                     /locus_tag="VEV83_19260"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK47328.1"
                     /translation="MPSAKTALELFKILPEGTRCQLTDNHIVMSPSPVWKHQDIVRLI
                     LTTISNHLIKKPVGKVLADVDVYINDENVYRPDIFFVSNNQLEILGEDGYIHGAPELV
                     IEVLSPGTSKYDKTKRKQPMPYTE"
     gene            1849..2667
                     /locus_tag="VEV83_19265"
     CDS             1849..2667
                     /locus_tag="VEV83_19265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK47329.1"
                     /translation="MSLQNKTVFITGASRGIGKAIALRLAKEGASIVIAAKSTAEDPK
                     LGGTIYSAAKEVELAGGKALAVQVDVRMEDQVKKAIEKTAETFGGIDILVNNASAIQL
                     SNTEQTEAKRFDLMHDINVRGTFLVTRYCIPYLKKSFGAHILNLSPPINMDEKWLSNH
                     IAYTMSKYNMSMMALAWASELKKYNIASNALWPATTIATAAVKNLLGGEALANMSRTP
                     DIIADAAYYILRRSPAECTGNTFIDEKVLEAEGITDLGNYSVKPGSELYPDLFL"
     gene            complement(2796..>2906)
                     /locus_tag="VEV83_19270"
     CDS             complement(2796..>2906)
                     /locus_tag="VEV83_19270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HYK47330.1"
                     /translation="GIGIDRLCMLMTNQPSIQDVLFFPQMRPERRAGEDL"
BASE COUNT          884 a          598 c          649 g          775 t
ORIGIN      
        1 acgcatggaa agcagcggag aagaaggaaa agtaaatatt tccggaggca cttatgaatt
       61 ggtgaaagaa aaatttaact gctcacacag aggaaaaatc caggcaaaaa ataaagggga
      121 gattgatatg tacttcgtag attttcaata attttaattc gcacgaaatc cgaagtgatg
      181 cagtagcccg ataacagacc ccctgcttac cgtttcccgc gttcattggc catttcctta
      241 ttaaggcgga ggttattttc aaaaattatc cttctcaagc aatctttcga ttgtgtatga
      301 ctgtgaaggc aatcaattcg tcgtaaatga tttgaacgct tcgaacgaag gtgtcaccga
      361 aacacttcaa aacttttcgg ctccgataca ttatttgatg agacatcgca ggcccctttt
      421 gatctttcct ttgggtacaa ttgcaatgga aatagtgaca tttcaagctg ttggcagttc
      481 tgttgccttg aggcatagag tccgtcgcag gcgcgaaata tccgtgagaa ataaatattt
      541 gaaataatat cacagcactt actgattaag tattttgcgg actaatattt tttggttgcc
      601 tgctttttca aaaaaactca tcatcataac tgcgccttcc ggggccggca aaacgtccgt
      661 taccaaatac ctgcttacaa aaatgcccga acttgctttt tctgtttcga tcactacgcg
      721 taaaccacgc atcgatgaaa ccaatggagt ggattattat tttgtttcag aagaagagtt
      781 tcatcaaaag atccgggagg acgcatttat cgaatgggaa atggtgtatg aaggcaaata
      841 ttacggcaca ttaaaaaccg aattggaacg gatctggacg caggaaaaaa ttccattgct
      901 cgacattgac gtgaaagggg cgattcgcgt gcacgagcaa tttgatgaaa attgtcttac
      961 gatctttatt gaaccaccat cggtggaaga acttcagaaa agattaacgg cccgtggcac
     1021 cgaaagcctt gaaagcatcc agacgagatt ggataaggca aaatacgaat tgagcttcag
     1081 gcacagtttc aatgagatca tcgtgaatga cgtcttgcaa gacgcttgtg aaaaaaccga
     1141 aagagttgtg agagactttt taggcattca ggtcgacagt tagatcaaga agtccgatgt
     1201 gaaaacttgt atccccgctt gcaaacattt taaaggatcc gttttcattt ataaagccgg
     1261 aacattgtat ggttgaaggc tcgacgagcc agtattcttt cactccgtat aaggcatagg
     1321 ttgctttctt tttgttttgt catattttga cgtgcctgga gacaatactt cgatcaccaa
     1381 ttccggcgca ccgtgtatgt aaccgtcttc gcccagaatt tccagttgat tgtttgacac
     1441 aaagaatatg tctggcctgt atacattttc atcattgatg tacacgtcta catcagccag
     1501 taccttgcca accggctttt ttatgaggtg gttgctaata gtagtaagaa taagtctgac
     1561 gatatcctgg tgcttccaaa cgggtgaggg tgacattacg atatgattgt ctgttaactg
     1621 gcatcgcgtc ccctccggaa gtatcttaaa tagctcaagg gctgtttttg cggacggcat
     1681 aagaaaataa gaaactatgc ggtaaagatc aggagaagta atggaaagac cagcagcgaa
     1741 ttattgacaa ctcacagttc accattcaca agaaaacatg ctttccatac tgctaattta
     1801 caaactttaa aaactctgta ttttctttgc agtaaaatta actggtctat gtcgctccaa
     1861 aacaaaacag ttttcattac cggcgccagc agggggatcg ggaaagccat agcattaaga
     1921 cttgcaaaag aaggcgccag tatcgttatc gccgcaaaaa gtacagcaga agatccgaag
     1981 ctcgggggaa caatttattc tgcagcaaaa gaagttgaat tagccggtgg taaggcattg
     2041 gcggtgcagg ttgatgtgcg aatggaagac caggtaaaaa aggcgatcga gaaaacagcc
     2101 gagaccttcg gcggtatcga catcctggtg aacaatgcgt ctgccattca actcagtaac
     2161 accgaacaaa cggaagctaa gcgcttcgac ctcatgcacg acataaatgt gcgcggaact
     2221 tttttagtaa cgagatactg cattccttat ctaaaaaaat catttggtgc acacattctg
     2281 aatctgtctc cgccgatcaa catggatgaa aaatggctga gcaatcacat cgcctatacg
     2341 atgagcaaat acaatatgag catgatggcg cttgcgtggg caagcgaatt aaaaaaatac
     2401 aacattgctt cgaatgcttt atggcccgca acaacgattg caaccgctgc ggtaaaaaat
     2461 ctcttaggcg gtgaagcgct cgcaaatatg agccgaacac ccgacatcat cgcagacgct
     2521 gcctattata tattgcgcag atctccggct gaatgcacag gcaatacttt cattgatgaa
     2581 aaagtattgg aagcagaggg cattactgat ctcggcaatt attcagtaaa accgggttcc
     2641 gagttgtatc ccgacctttt tttgtgattg cagattggcg attgcagatt gcgaattgag
     2701 aatttgtgat ttgggatttg ggatttagga tttaggattt tacatcatac atcagagatc
     2761 agacatcatt acatcagaga tcagacatca ttacatcaga gatcttcgcc tgccctgcgc
     2821 tcgggcctca tttgcgggaa gaacagcaca tcctgtatcg aaggctggtt cgtcatgagc
     2881 atgcatagcc tgtcaatgcc aatacc
//
LOCUS       DASQJI010000720         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2866987,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000720 DASQJI010000000
VERSION     DASQJI010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2866987"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1652)
                     /locus_tag="VEV83_19275"
     CDS             complement(<1..>1652)
                     /locus_tag="VEV83_19275"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47331.1"
                     /translation="LLSFSTLYKEPDNFMDWNGGEQYTAYLQLKPGASAAALEKKFPA
                     FMWKHINQDYSTVGMKVDAFLQPLKDIHLYFSDNSDSLRTNIYVFSIIAVLILIISCV
                     NYVNLTIAQAITRFKEIGVRKVLGAVRSQLIKQFLIETLLITTVAFLVAVGLVVLFSP
                     IYQQVLGKTLPPLGITALPALLLLFIIVMAVGIISGSYVAFYLSSFNAIRIFKALMPQ
                     SSQSIFRKGLIVVQFAITIGLMACTLLVSQQLRYSKNINMGFDKDHILVLPLVGETTA
                     QAYPLLKQKLSQIAAVRELCAVSEIPYDGITNNGFIPEGDSKAMIIHQLDVDENFLKT
                     FHIKMISGNFFSKDLPTLSDGYVINETLALTLGWKNPVGKTISRNGEHKVIGVVQDFH
                     FASLHDKIAPLIITNKPWGDRYSYLAIKYATDNTPVFVNGVKQTWKSTVAGGPFDYWF
                     LDDAFNTIYKSEERFRQIFTYFSALSIILSLAGVFGLVALSLKQRTKEFGIRKVLGAR
                     VQDMISLATKDFVRMIALAAVLVTPVAWMYINKWLENFAYRI"
BASE COUNT          497 a          363 c          340 g          452 t
ORIGIN      
        1 tgaatgcgat aagcaaagtt ctctaaccat ttatttatgt acatccatgc caccggcgta
       61 acaagcaccg ctgctaaagc gatcattcgt acaaaatcct ttgttgcaag actgatcatg
      121 tcctgcactc tcgcaccaag cacttttctt atgccaaatt cttttgtgcg ctgtttaaga
      181 gaaagcgcaa ctaaaccgaa cacaccagca agtgaaagaa taatcgacaa ggcagaaaaa
      241 tacgtgaaga tctgccggaa gcgctcctca cttttgtata tcgtattgaa tgcatcgtca
      301 aggaaccagt aatcgaaagg accgccagct acagtgcttt tccatgtctg ttttacccca
      361 tttacaaata caggtgtatt gtccgtcgca tattttatag cgaggtatga ataacggtcg
      421 ccccatggtt tattagttat tatcagcggt gctatcttat catgcaatga agcaaaatga
      481 aaatcctgga ccacaccaat cactttatgc tcgccatttc tgctgatcgt ttttccaacc
      541 gggtttttcc aacccaatgt tagagcaagc gtttcattta ttacataacc gtcgctgagt
      601 gttggtagat ctttcgagaa gaaattacct gatatcatct tgatgtggaa ggtttttaaa
      661 aagttttcat cgacatcgag ctggtgaatg atcatggctt tcgaatcacc ttcaggaata
      721 aagccattgt tagtaatgcc gtcatatgga atttcagaaa ctgcacacaa ttctcttaca
      781 gctgcgattt gagacagttt ttgtttaagc agcgggtaag cctgcgccgt agtttcacca
      841 accaaaggca acacaaggat gtggtctttg tcaaaaccca tattaatgtt tttactgtac
      901 cgcagttgct gcgacacgag aagagtgcat gccatcaagc cgatcgtaat tgcaaactga
      961 acaacgatca atcctttgcg gaatatgctt tgcgaacttt gcggcatcag cgctttaaat
     1021 attcttatcg cattaaatga agagagatag aacgccacgt aactgcctga aataatgcct
     1081 acagccatta cgattataaa caacagcaat aaagccggca acgcggtaat gccaagcgga
     1141 ggaagtgttt ttccaaggac ctgctgataa atgggagaaa ataaaacaac aagtccaact
     1201 gcaaccagga atgcgaccgt tgtgatcaac agggtttcga taagaaactg ttttataagc
     1261 tgagaacgaa cagcacccag cacctttctt acgccgatct ccttaaatct tgttatcgcc
     1321 tgcgcgatcg tcagatttac atagttgacg cacgaaatga tgagaataag caccgcgata
     1381 atgctgaaca catagatatt agttcgcaag gaatcggagt tgtcgctgaa ataaagatga
     1441 atgtctttta gtggttgaag gaatgcgtcg accttcatgc ccaccgtcga atagtcctgg
     1501 ttaatatgct tccacataaa ggcaggaaat tttttttcaa gtgcagcggc acttgcgccg
     1561 ggtttgagct gcagataggc ggtgtattgt tcaccgccat tccaatccat aaaattatca
     1621 ggctctttat acagtgtact aaacgacaac aa
//
LOCUS       DASQJI010000721         3706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_257875,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000721 DASQJI010000000
VERSION     DASQJI010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3706
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257875"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="VEV83_19280"
     CDS             complement(<1..542)
                     /locus_tag="VEV83_19280"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HYK47332.1"
                     /translation="MNWIDILLLAIILLAVLGGLYRGFLLGTLELAGWIASVAIGFAF
                     YPYAANLFQKYAPSLGVWTFPLSFILVIILARLILSLIINGILRATPSTVHRSPLNHA
                     AGMIPGFVNGVIYATIVSALLLAFPISNQFSESARDSKVANAFGLGVEWLNEKISPVF
                     DKAVDQSMHKLTVEPESDEIV"
     gene            complement(646..1437)
                     /locus_tag="VEV83_19285"
     CDS             complement(646..1437)
                     /locus_tag="VEV83_19285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47333.1"
                     /translation="METNNPSEKNRATGYKGDNESSNENMDTENSSGQNKDGTQTGNK
                     AQSSGMKGSSSAGSGMGNSGNSGMGSSGRGTGMSSESGSTQSETSWQGPGGSQSGTGN
                     MGSSSRSQGMSDTSRGSGNMSNTGSSSRGMGNTSGSSAESMNQSGSGTGNVGNTSGSQ
                     NRSSSQTGKMSGSSGGSMNQGSGSGKSGGGYENTGSGAGAGNMGNEKRATMSSSSGTG
                     DESEDDMSGEYDNTPDLDEADMEENDLTDDEADNIEWDDQDSPNK"
     gene            1768..>3706
                     /gene="metG"
                     /locus_tag="VEV83_19290"
     CDS             1768..>3706
                     /gene="metG"
                     /locus_tag="VEV83_19290"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HYK47334.1"
                     /translation="MTKRFKRYLVTAALPYANGPLHIGHMAGCYLPADIYVRYLRAQK
                     RDVRFVGGSDEHGVPITIRALKEDVSPQDIVDKYHAMIKQSFEQMGISFDIYSRTSNP
                     IHHQTAADFFRKLYDDGLFEEKETEQYYDEKAKTFLADRYITGTCPVCGNPSAYGDQC
                     ERCGSSLSPEMLINPRSTLSDAVPVKRKTKHWYFPLQNYEPWLKEWLLEGHKEWKNNV
                     YGQCKSWLDTGLQSRAMTRDSNWGVKVPLPDAEGKVLYVWFDAPIGYISATKELTDKW
                     ADYWWDEETRLIHFIGKDNIVFHCIIFPAMLKAHGKFVLPDNVPANEFLNIEGDKVST
                     SRNWAVWLHEYVKDFPGCEDVMRYVLCSNAPETKDNDFTWKDFQEKNNSELASIFGNF
                     VNRTFVLMHKWFMGKVPKLNEKTLTSIDKELIKNVQQSAINVQTNIEQFKFRDALFEV
                     MDLARKGNKYLQEKEPWKKVPATLATTGITNVDFTNKTEVENTIHLCLQICANLSIIM
                     NPFLPFTSRKMLHMMKVVDKILDWENAGRIDLLKVGYSLRAPEILFRKIEDKEIEAQI
                     QKLKSGSIKAPGSEPGTVTEEEKLEAHSSQLKAEIVYDDFAKLDFRIGKILSAEKVAK
                     ADKLLKLEIDLGFEKRTVVSGI"
BASE COUNT         1086 a          810 c          834 g          976 t
ORIGIN      
        1 acaatttcat cactctccgg ttcaacggtc agtttgtgca tgctttgatc taccgcttta
       61 tcaaaaacag gcgagatctt ttcattcagc cattcaacgc ccaatccaaa cgcattcgca
      121 actttactgt cgcgcgcaga ttcggagaac tgatttgaaa tgggaaaagc gagcaagagg
      181 gctgacacga tggttgcata gataacacca tttacaaaac cgggtatcat cccggccgca
      241 tgattgagcg ggcttctgtg aacggtcgac ggcgttgcgc gcagaatgcc attaatgatc
      301 aacgacaaaa tcagtcttgc gagaatgata acaaggatga aagacagcgg aaaagtccat
      361 acgccgagcg aaggcgcata cttttgaaat aagttagcgg catagggata aaatgcaaaa
      421 ccaatggcaa cgcttgcgat ccacccggca agttccaggg ttcctaaaag aaagccccgg
      481 tacaatccac ctaaaacagc gaggaggatg atcgcgagca acagaatgtc gatccaattc
      541 ataaaagttt tttccgacgc aaaaattatg ctattgacta caaagcagta aaaagccttt
      601 gcgaaaaacg caaaggccca ttaagagaac ccgaaacaca aatgtttatt tattaggaga
      661 atcctggtcg tcccattcaa tattgtctgc ttcgtcatcc gtcagatcat tttcttccat
      721 gtctgcttcg tcgagatccg gagtgttatc gtattcaccg ctcatgtcgt cttcactctc
      781 atcccctgtg cctgaactgc tgctcatagt cgctctcttt tcatttccca tatttcctgc
      841 accagctcca cttcctgtat tttcataacc accgcctgac tttccgcttc ctgaaccctg
      901 gttcattgag ccacccgatg agccgctcat tttgcccgtc tgactgctgc ttctgttttg
      961 acttccactg gtattgccca cattacctgt gccacttccg ctctgattca ttgactcagc
     1021 agatgagccg gatgtgtttc ccataccgcg gcttgaactc cccgtattgc tcatgttacc
     1081 agaacctctc gacgtgtcgc tcatgccttg cgaacgtgaa gaactaccca tattgccggt
     1141 gcctgactgg cttccacccg gtccctgcca ggaagtttcc gattgtgttg atccagattc
     1201 gctgctcatt cccgtgcctc tgccactgct gcccattcct gaattgccag aatttcccat
     1261 tccgctgcct gcagaactgc ttcctttcat gcctgaactt tgcgccttat ttcccgtttg
     1321 agttccgtct ttattttgac cgctgctatt ttccgtgtcc atattttcat tggagctttc
     1381 gttatcaccc ttgtaaccag tagcccggtt tttttcggat ggattatttg tttccataca
     1441 aagtgttttt aggattaaca ataattatta aagggcaaat aacaagccat tcatttgacg
     1501 gcgaagatta ctgatttaac tgactgctga gtggaattcg attcattaat gttgctgcgc
     1561 ttcctcaata atgagaaccg tgtcgcgcaa aacatcgtcg aggatccgcg tgaccatttt
     1621 gaccggatgg ctacagagat tgagaagcac tgtttctgca tgttcaccta tttttgcaac
     1681 tcgataaaaa atcgaactct tatctaaagg acaagtacag tggctagtaa tgagaataaa
     1741 aatagttcaa gttcaagcaa cggggagttg acgaaacgct tcaaacgata cctggtcacc
     1801 gccgcattgc cttatgccaa cgggccgctg catattggcc acatggccgg ctgttatttg
     1861 ccggccgata tctatgttcg ttatttaaga gcacaaaaaa gagatgtaag gtttgtaggg
     1921 ggaagcgatg aacacggcgt tcctattaca atacgagcgt tgaaagaaga cgttagtccg
     1981 caggatatcg ttgataaata tcatgcgatg atcaagcaaa gctttgagca aatggggatc
     2041 tcgtttgata tttattcaag aacatccaat ccaatccacc atcaaacggc agcagatttt
     2101 ttcaggaagt tatatgacga cggtctgttt gaagagaagg aaacggagca gtattacgat
     2161 gaaaaagcaa aaacattttt agctgacagg tatatcaccg gcacatgccc ggtatgcggc
     2221 aatccttccg cttatggcga tcaatgtgaa aggtgtggaa gttcgttaag tcctgaaatg
     2281 ctcatcaacc cccgcagcac attgagcgat gcggttcctg taaaaagaaa aacaaaacac
     2341 tggtatttcc cattgcagaa ttatgagccc tggttgaaag agtggctcct ggaaggacat
     2401 aaagagtgga agaataatgt ttatggtcaa tgcaaaagtt ggctggacac cggtttgcag
     2461 tcaagagcaa tgacgagaga cagcaactgg ggagtgaaag ttcctttgcc ggatgcggaa
     2521 gggaaagttt tatatgtatg gtttgatgcg ccgataggtt atatcagcgc gaccaaagaa
     2581 ctcactgata agtgggcaga ctattggtgg gacgaagaga caaggcttat ccatttcata
     2641 gggaaagaca acatagtgtt tcattgcatc atctttcctg caatgctcaa agcgcatgga
     2701 aaatttgtgt tacctgataa tgtgccggcg aatgaatttt taaatattga aggcgacaag
     2761 gtttcaacga gcagaaactg ggcagtatgg ctgcacgaat acgtaaaaga ttttccgggc
     2821 tgtgaagacg tgatgcgata tgtgttatgc agcaacgcgc ccgagacaaa ggacaacgat
     2881 tttacctgga aagatttcca ggaaaagaac aacagtgagc tcgcaagtat attcggaaat
     2941 ttcgtgaacc gcacatttgt tttgatgcat aagtggttta tgggaaaggt gcccaagctt
     3001 aatgagaaaa ctttaactag catcgacaag gaattaataa aaaatgttca acaatcagca
     3061 atcaatgttc aaactaatat agagcaattc aaatttcggg acgcactttt cgaggtgatg
     3121 gacttggcaa gaaaaggaaa taagtatcta caagaaaaag agccgtggaa aaaagttccg
     3181 gcaacactag caacaaccgg aattacaaat gttgatttta ccaacaaaac cgaggtcgaa
     3241 aatacgattc atttgtgttt gcagatttgc gcgaacctct caattatcat gaatccgttt
     3301 cttccattca catcaaggaa gatgttgcac atgatgaagg tggttgataa gattttggat
     3361 tgggaaaatg cgggcaggat tgacttatta aaagtcggtt acagtttaag ggctcctgaa
     3421 attttattca gaaaaattga agacaaagaa atagaagctc aaattcaaaa attaaaaagc
     3481 ggatcaataa aggctcccgg gtccgagcca ggaacggtaa ccgaggaaga aaagctcgaa
     3541 gctcacagct cacagctcaa agctgagatt gtttacgacg acttcgcaaa acttgatttt
     3601 cgcatcggaa aaattctttc ggcggaaaaa gttgcaaagg cggataaact tttgaaactt
     3661 gagatcgacc tcggttttga aaagaggacg gtcgtgtccg ggatcg
//
LOCUS       DASQJI010000722         3523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1638111,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000722 DASQJI010000000
VERSION     DASQJI010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638111"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VEV83_19295"
     CDS             complement(<1..338)
                     /locus_tag="VEV83_19295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK47335.1"
                     /translation="MTETTQTQKTHSGCTQMILPVRDALDILSGKWKLPILISLSFGN
                     KRFRQISREIPNITDKMLSKELRDLEMNQLVKRTVYDTLPVTVEYSMTNYGKSLEKVI
                     EELAKWGMQHR"
     gene            436..1005
                     /locus_tag="VEV83_19300"
     CDS             436..1005
                     /locus_tag="VEV83_19300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYK47336.1"
                     /translation="MQTTTINQDTKWVLDNTHSEVYFKVKHLMISTVTGQFKKFRGSV
                     ETDGDDFSTAKIQFAADVDSISTNNEQRDAHLKNGDFFDADNHPQLIFDGDKLEKIDD
                     EEYALYGTLTIRGTSKRVKLNVQFGGLTNDPWGNTRAGFSVSGKIDRSDYGVSFGAVT
                     ETGGLLLGNEVKIHAEVQFVKQEVLEEVA"
     gene            complement(1120..>3523)
                     /locus_tag="VEV83_19305"
     CDS             complement(1120..>3523)
                     /locus_tag="VEV83_19305"
                     /inference="COORDINATES: protein motif:HMM:NF039936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47337.1"
                     /translation="NDAMVPVQLYDPYGDETGGALLLPDGRALFLGSSGHNAYYTPSG
                     STAPGTWSAAPDFPNAQGTPDAPAAMMVNGKVLCNASPIPTSGNHFPSPTTFYEFDPA
                     TNSFTAIPAPGGGSTLNQPTYVTCFLDLPDGRVLYSLQGSSQYYVYTPSGSPIASGKP
                     TVASVSQTGTSTYQITGTLFNGLSEGATYGDDWQMNSNYPIVRLTNGSNVYYCRSFRW
                     NSTGVMRGNKPDTATFTTPAGLPNVPYSLYVVANGIASDPVSFTLAPVASVSIGITSG
                     SNPSCSGASVTFTATPTNGGSSPSYQWKVNGGSVGTNSSTYTTTTLTNGQIVTCVMTS
                     NLANVQGNPATSNPITMAITTPTPAGVSIGASATTICAGTSVTFTATPVNGGTSPSYQ
                     WKVDGGNAGTNSATFVTSSLTNGQVVTCTMTSNSTCVTTNVANSNQVTMTVNPLPTVS
                     FSGLASTYDVNDPAATLTGSPAGGTFSGPGISGNTFSPSVAGAGGPYTITYSYTNGNG
                     CSNSSSQQTTVTNNSCTPPPTPGAIAGQTSGVCSSTKAYSISAVAGATSYTWTVPAGA
                     SVSSGQGTTTVNIAFTTNFSSGTISVKANNSCASSNASSVTVSGAPAQAGAISGPTAV
                     CANQANVNYSIAAVAGATSYTWTVPVGTSIKNGQGSTAIKVKIGTSGGNVTVKANNSC
                     GSGLTNSVAVAITCKGPGKRPDFAGATAGSLAPFMNVSPNPLQSSAKLEFMVAASGTA
                     SVRIYDVTGRQLSILFNGKVEGGKVYDLKFNGNELKAGVYLITLKTENAETITKKLIV
                     AR"
BASE COUNT          891 a          799 c          857 g          976 t
ORIGIN      
        1 cggtgctgca taccccattt ggccaactcc tcgatgactt tttcaagcga tttaccatag
       61 ttggtcatgg aatattctac agttaccggc agcgtgtcgt aaactgttcg tttaacgagc
      121 tgattcattt caagatctct aagctccttt gataacatct tatccgtaat gttcgggatc
      181 tccctcgaaa tttgcctgaa tcgtttgttg ccaaatgata atgatataag aataggcaat
      241 ttccacttgc cgcttaaaat gtcgagtgca tctctcacgg gcaggatcat ttgcgtgcaa
      301 ccgctgtgcg ttttttgtgt ttgcgttgtc tctgtcatac gactcgcttt cctaaagtat
      361 agtgctatac ttgtgtatag tacttactat tgtatagcaa atatacggaa ttttgtgtct
      421 gaaaaagatt tatttatgca aacaacaaca attaaccagg acacaaaatg ggtgcttgac
      481 aatacacact ccgaggtgta cttcaaagta aaacacctga tgatctctac cgttacaggc
      541 cagttcaaaa agttcagagg cagcgtggag acggatggtg atgatttcag cacagcaaaa
      601 attcaattcg ccgcagatgt agattcaatt tctacgaata acgagcaaag ggacgcgcat
      661 ttgaaaaatg gagatttctt cgatgcagac aatcatccgc agctcatctt cgatggcgac
      721 aagctcgaaa agatcgatga cgaagaatat gcgctttacg gcacgcttac catcaggggc
      781 accagcaaga gagtgaaatt gaatgttcaa ttcggcggtt taacaaatga tccgtgggga
      841 aatacgcgcg ccggtttttc cgttagcggt aagatcgacc gttctgatta cggcgtcagt
      901 tttggcgcgg tcactgagac cggcggttta ttgttaggga atgaagtgaa aattcacgca
      961 gaagtgcagt ttgttaagca ggaagtcctc gaagaggttg catgattggc aaagctcggt
     1021 gaatatgagt tctttttaag gtcgcagtgt aaccaggata actaataaaa aaagtcctcc
     1081 aagccggagg actttttaat ttttctaatg atcaatctct tatcgcgcta cgatcaattt
     1141 ctttgtgatc gtttctgcat tctcagtttt aagtgtaata agatagacgc ctgctttcaa
     1201 ttcgttacca ttaaacttca gatcataaac ctttccgcct tcaacttttc cattaaataa
     1261 tatggacaat tgtcttccgg taacgtcgta tatcctaacg ctggcggtgc ctgatgcagc
     1321 aaccatgaat tccagtttcg cgctgctttg caacggattt ggagatacgt tcatgaacgg
     1381 agcgagcgaa ccagctgttg caccggcaaa gtctggacgt tttccggggc ctttgcaggt
     1441 tattgcaact gcaactgaat ttgtaagtcc cgaaccgcac gaattatttg ccttaacggt
     1501 tacatttccg ccactagttc caatcttcac tttaatggct gtgcttccct gcccattctt
     1561 tatcgatgtt cccaccggca cggtccatgt atatgaggta gctccagcta ctgctgcgat
     1621 ggaataatta acgttcgcct ggttcgcgca tacagcagtc ggacctgaaa ttgcaccggc
     1681 ttgcgcagga gctccactta cggtaacaga tgatgcattg ctgcttgcgc atgagttatt
     1741 tgctttgacc gaaattgttc cgcttgagaa gttggttgtg aaagcaatat tgacggttgt
     1801 agttccctgg ccactgctga cagatgctcc tgcgggaact gtccaggtgt aactggttgc
     1861 accagcaact gcagatatcg agtatgcttt cgttgaagaa caaacacctg atgtttgacc
     1921 cgcgatcgca cccggcgtgg gcggaggtgt gcagctattg ttcgtaacag ttgtttgttg
     1981 cgatgatgaa ttactgcatc catttccatt ggtatatgag taagtgatcg tgtaaggtcc
     2041 acctgcacct gcaacagaag ggctaaatgt attgcctgaa atgccgggtc cactgaaagt
     2101 gccaccggcc ggtgagccag ttaacgtcgc cgcaggatca ttcacatcat acgttgaagc
     2161 caggccactg aacgaaactg tcggcaacgg atttacggtc atcgtaacct ggtttgaatt
     2221 tgcaacgttt gttgtcacac aagttgaatt tgatgtcatc gtacatgtaa caacttgccc
     2281 attcgtcaat gaagaggtta caaaagttgc gctatttgtg cctgcatttc ctccgtcaac
     2341 tttccactga tatgatggag aagttccgcc attaacagga gttgctgtaa aagtcacaga
     2401 tgttcctgca caaatcgtcg tggcacttgc gcctatactg acgccggccg gtgttggcgt
     2461 cgtaatcgcc attgttatcg gattcgacgt ggcaggattg ccttgtacat tagccaggtt
     2521 ggaagtcatc acacaagtaa cgatctgccc attggttaaa gtggtcgtgg tgtacgtgct
     2581 gctgtttgtt ccaacactac cgccgtttac tttccactga taagaaggag aagaccctcc
     2641 attcgttggc gttgctgtga aagttacaga agcgcctgaa caggacgggt ttgaacccga
     2701 cgttattcct atactcacgg atgcaacagg cgccagcgta aacgacacag gatctgaagc
     2761 gattccattt gcaacaacat aaagtgagta tggtacatta ggcaaacctg cgggcgtagt
     2821 gaatgttgcc gtgtcgggct tatttcctct cattacgccg gtactgttcc acctgaagct
     2881 gcggcagtaa taaacattgg agccatttgt gagacgcacg attgggtagt tgctgttcat
     2941 ttgccaatcg tctccgtatg ttgctccctc ggagagccca ttaaataatg tcccggtaat
     3001 ttgatacgtg ctcgtgcctg tttgtgaaac ggaagctacg gttggctttc ctgaagctat
     3061 aggagagccg ctcggcgtgt acacataata ctggcttgag ccctggagcg aataaagcac
     3121 cctgccgtct ggcagatcga ggaagcaggt tacatacgtg ggctggttta acgtgcttcc
     3181 gccgccaggt gcaggaatgg cggtaaaaga attcgtagca ggatcgaact cgtaaaaggt
     3241 tgttggactc ggaaaatgat ttcctgaagt tgggatagga gaagcattac aaagcacctt
     3301 tccattaacc atcatggctg cgggtgcatc aggagttccc tgcgcgtttg gaaaatccgg
     3361 cgctgcagac caggtccccg gcgctgtgct gcctgatggt gtgtagtatg cgttgtggcc
     3421 ggatgaaccg agaaacaaag cgcgcccatc aggcaataaa agtgctccac ctgtttcgtc
     3481 tccatacgga tcatataatt gcaccggtac cattgcatca ttg
//
LOCUS       DASQJI010000723         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2254760,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000723 DASQJI010000000
VERSION     DASQJI010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254760"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /locus_tag="VEV83_19310"
     CDS             <1..793
                     /locus_tag="VEV83_19310"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR00045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HYK47338.1"
                     /translation="ELIRNALDKQVKKIILCIGGSATVDGGTGALRALGIRFVDRANN
                     VLTNLPEDLNHLAAIDLSRLDKRIFNCEIVVLCDVENTLLGEHGAAKIFGPQKGATEA
                     DVQKLETALNQFRDIVLQQTGKDMASIRHGGAAGGIAASFATLLNAELVNGIHYFLDV
                     TGFDKALAEADLVITGEGSIDEQTLQGKGPYGVAKRAKQKGVPVIALAGRIPSQENAE
                     LKKYFDKMVPISTEPDIEQAMKRTKEDLTSTAMQIGNLLNDGLLF"
     gene            complement(842..>1518)
                     /locus_tag="VEV83_19315"
     CDS             complement(842..>1518)
                     /locus_tag="VEV83_19315"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYK47339.1"
                     /translation="LRGNDMLRIEALSDAVFAFSVSLLVASLEVPQTFGELKIILRGA
                     IPFFATVALIFVFWYQQYVFFRHYALNDFRTILINLVYLAVILFYVYPLKFLFSLLIS
                     SWTGIDLFPKASEKQVPVLLQTDFPQVIIIFSAGYFFIWLLLYFMHARALHATKDPAL
                     DKYEIEYTRKERRGALWNSMVGAIAIIFALVNVEWLSGVCYLAIPLLLMANEKLFRSR
                     IRRIKV"
BASE COUNT          486 a          334 c          351 g          347 t
ORIGIN      
        1 cgaactgata agaaatgcac tggacaaaca agtaaaaaaa attattctct gcatcggtgg
       61 cagcgcgacg gttgatggag ggactggcgc actgcgggcc ttaggtattc gatttgtaga
      121 tcgtgctaat aatgttttga ccaacctgcc cgaggacctc aaccatcttg cagcaattga
      181 cttgtcacgg ctcgacaaaa gaatttttaa ttgtgagatc gttgttctgt gcgatgtcga
      241 aaacacactg cttggcgaac atggcgcagc aaaaattttt ggcccacaga aaggcgcgac
      301 tgaagcggat gttcagaaac tcgaaacggc gcttaatcaa tttcgcgaca tcgttcttca
      361 gcaaaccgga aaagatatgg cgtcgatcag gcatggcggc gcggcaggcg gtatcgccgc
      421 aagttttgcc actttattaa acgcagaatt agtgaatggt attcattatt ttctcgacgt
      481 aacaggattc gacaaagcat tggcagaagc tgatcttgta ataacaggtg agggaagtat
      541 tgatgaacag accctgcagg gaaaagggcc gtatggcgtc gccaaacgag cgaagcaaaa
      601 aggtgttccc gttatcgccc tggcaggaag aataccatca caggaaaacg ctgagctgaa
      661 aaaatatttt gataagatgg ttcccataag caccgaaccg gacatcgaac aagcgatgaa
      721 acgcacgaaa gaagatctta caagcaccgc aatgcaaatc ggaaatttat taaatgatgg
      781 gctgctgttt taagtgtttt aaattaaaca agctgatcaa aaaaaccttg catgcagtcg
      841 atcatacttt tattctcctg attctcgagc ggaataattt ttcattcgcc atcaacaaaa
      901 gcggaatagc aaggtaacaa acacccgata gccattcaac atttaccagc gcaaaaatga
      961 tagcaatcgc gccaaccatc gaattccaaa gagctcctct ccgctccttt cttgtgtact
     1021 caatttcata tttatccaac gccgggtcct ttgttgcgtg taaagcccgg gcatgcataa
     1081 aataaagcag cagccagata aaaaagtatc ctgcgctgaa aataatgatg acctgcggaa
     1141 aatcagtttg taataaaacg ggcacctgct tttcagaggc tttggggaac aggtcaattc
     1201 ctgtccatga agagatcagg agcgaaaaca agaacttgag cgggtataca taaaataaaa
     1261 tgaccgccag gtataccaga ttgatcagga tcgttcgaaa atcgttcagc gcatagtggc
     1321 gaaaaaacac atattgctgg taccagaaaa caaagatcaa agcaacggtc gcaaaaaatg
     1381 ggatcgctcc acgaaggatg atctttaatt ctccaaaagt ttgcggcact tcgagtgatg
     1441 cgaccagcag cgacacggag aacgcaaaaa cggcgtcgct gagcgcttca attctcagca
     1501 tatcgtttcc acgcagcc
//
LOCUS       DASQJI010000724         4350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3021257,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000724 DASQJI010000000
VERSION     DASQJI010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3021257"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1090)
                     /locus_tag="VEV83_19320"
     CDS             complement(<1..1090)
                     /locus_tag="VEV83_19320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HYK47340.1"
                     /translation="MEILIILGLIILNGIFALAEIALISARKARLEAQANKGDKRAKE
                     ALKLANHPDKFISTTQLGITLIGILNGVFSGEHIKDSLAEFLKQFSFIAPYSNGIATA
                     IVVIIVAYFSLVIGELVPKRIGMSNPEGFAKFFAAPMRFVTVISYPFIWLLTKSGNVI
                     VRLLNIKTKDSNVTEEEIKAIINEGTEQGTIEEAEQEIIERVFHLGDRNITSLMTHRS
                     DIIWLDTNLAVDEVNQLPEDELHSIYPVCDGDIDNIKGIVSLKDIVKAKPGTRLGEVT
                     TAPLYVPETNSAYKVLETFKEQKSHYAFIVDEYGTVQGMITLNDILDAIVGEVPHIDE
                     EQYEIVERKDGSYLVDAQIPFYNFLSYFD"
     gene            complement(1158..1673)
                     /locus_tag="VEV83_19325"
     CDS             complement(1158..1673)
                     /locus_tag="VEV83_19325"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK47341.1"
                     /translation="MPHYTYEDYIHWDGNWELIEGIPYALSPQTLPKHQRISVSISSS
                     FFIELKKCKKCTVYQPIDYKITEDTILQPDMLVVCEPITKKFLDFAPALVLEIISPSS
                     ALKDRHTKFEIYQTEAIPYFVIISPDEEEAEIYELINNSYTLTQRGHSFLYTFSLHDC
                     RAEINFGEIWQ"
     gene            complement(1722..2321)
                     /locus_tag="VEV83_19330"
     CDS             complement(1722..2321)
                     /locus_tag="VEV83_19330"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK47342.1"
                     /translation="MWNTFHTWDTYLFFAINNTWTSSFLDHILPWWRDSTTWYPLYLF
                     LLIFILINFGWKSWTWILFVIINVTITDQFSSTYVKQWIPRLRPCQDPALEEHVRMIV
                     NHCSGGYSFPSSHATNHFGAAVFFFCTLRPYLKKWAYLFFFWAASISYGQVYVGVHYP
                     SDVIGGAILGSIIGYLMSLIYRKKIGLPDLVTLTTGKAQ"
     gene            complement(2326..3069)
                     /locus_tag="VEV83_19335"
     CDS             complement(2326..3069)
                     /locus_tag="VEV83_19335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYK47343.1"
                     /translation="MVAAEWFRAWFSSPYYDLLYNQRNEQEATFCINKFVEFLNIPAA
                     SRILDVACGKGRHSRALASRGFDVTGIDLSAPSIIEAKNFETDNLHFYVHDMRLPFWI
                     NYFDYVFNFFTSFGYFRTMREHDDAIRTMAQSLKMNGTVTIDYLNVHYAEDHLVPREE
                     KRSNGVMFNIDRWFDEKHFFKRIHVEETEKKISETFTEQVEKFSLGDFTDMLSYEGLA
                     IEHIFGDYELNKYHVRNSPRMIMVARKIH"
     gene            3173..>4350
                     /locus_tag="VEV83_19340"
     CDS             3173..>4350
                     /locus_tag="VEV83_19340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HYK47344.1"
                     /translation="MPLIKSISGIRGTIGGKSGDSLSPVDTVKFTAAYAVWLKQQTAK
                     QIYTVIVGRDARISGAFLQQLVMNTLVASGVHVIDLDLSTTPTVEMAVISHNADGGII
                     VTASHNPAEWNALKLLNGKGEFLNAADGEQLLATAADEHFNFSTVEKLGTITTDPAAL
                     EKHITAIVEFPLVDIAAIKKKKFRIVIDAVNSTGAIAVPALLKALGVKDLIVLNEEMN
                     GRFAHNPEPLPQNLSQLSTEVRKQEAHLGIAVDPDVDRLCFVCEDGSMFGEEYTLVAV
                     ADFVLQQKKGNTVSNLSSTRALKDITLRNGGEYFPSPVGEVNVVEKMKQVNAVVGGEG
                     NGGIIVPDLHYGRDALAGIALFLTYLAQSNKSALQLRRLYPDYFISKNKIEVNNDIDV
                     "
BASE COUNT         1230 a          926 c          953 g         1241 t
ORIGIN      
        1 gatcgaaata gcttaagaaa ttatagaacg ggatctgcgc gtctaccaga taacttccgt
       61 cttttctctc aacgatctcg tattgttctt cgtcgatatg cggcacttca cctacaatgg
      121 cgtcaaggat atcgttcaag gtgatcatgc cctgtacagt tccatattca tccacgataa
      181 aagcgtaatg tgatttttgc tctttgaagg tctcaagcac tttataagcc gaattcgtct
      241 ccggcacata caatggtgca gttgtcacct cgccaagcct ggttcctggt ttggccttca
      301 caatatcttt cagggaaacg atgcccttga tgttatctat atcaccgtca caaaccgggt
      361 agatagaatg taactcatct tccggcaatt ggtttacttc atcaacggcc aggttcgtat
      421 cgagccaaat gatatcgctt ctgtgagtca tcaaggaagt gatgttcctg tcgccgaggt
      481 gaaacacgcg ttctataatt tcctgctctg cttcttcgat cgttccttgt tcggttcctt
      541 cattaataat tgcttttatc tcctcttcgg tcacattcga atctttagtc tttatgttta
      601 acaggcggac aataacgttc cctgattttg tgagcagcca tatgaatgga taactgatca
      661 cggttacgaa tctcatgggc gctgcaaaaa attttgcaaa tccttccggg ttgctcatgc
      721 cgatgcgttt aggaaccagc tcaccgatca ctaacgagaa ataggcgaca attatcacca
      781 cgatagctgt tgctatgccg ttgctgtacg gagcgatgaa cgagaactgt ttaagaaatt
      841 cggcgaggct gtctttgata tgttcacctg aaaacacacc gttcaggatg ccgataagcg
      901 ttattccaag ctgagtggtt gaaataaact tgtccggatg attagccaac ttcaatgctt
      961 cctttgcgcg cttatctcct ttgttggctt gcgcctcaag tcttgcttta cgagccgata
     1021 tcagtgcgat ttcggctaaa gcaaaaatgc cattcagaat aataagccca agaattataa
     1081 gtatttccat aaataattga gcgcaaaact aatcaatctg cattttatgc tgatcgctca
     1141 actccaatcc tgcaagctta ttgccagatt tcaccgaagt tgatctcagc cctgcaatcg
     1201 tgaagcgaga acgtgtaaag gaaagagtga ccacgctgcg taagtgtata tgaattgttt
     1261 attaactcat atatttcagc ttcttcttca tcaggagaaa taataacaaa gtagggaatg
     1321 gcctcggttt ggtaaatttc gaattttgta tgcctgtctt tcagtgcaga agatggcgat
     1381 ataatttcaa gcacaagcgc tggcgcaaaa tcaagaaatt tttttgtgat aggctcgcat
     1441 acaaccagca tatcgggctg caaaattgtg tcttcagtaa ttttgtagtc gatgggctga
     1501 tagaccgtac attttttaca cttctttaat tcaataaaaa agctacttga aatacttacg
     1561 cttatccgct gatgttttgg gagtgtttgc gggctcagtg cgtatggaat tccttcgatt
     1621 agctcccaat taccgtccca atgaatgtaa tcctcatagg tataatgggg caatattttg
     1681 atggcagaac ctatttaggg gatcaaaaat acgaaaccag attattgagc ttttcctgtg
     1741 gtaagcgtca ccaggtctgg cagaccgatt ttttttctat atatcaacga catcaaatac
     1801 ccaataatgc taccgagaat cgcgccgcca atcacgtcgg acggataatg aacaccgaca
     1861 tacacctgtc cgtaactgat ggaagcggcc cagaaaaaaa acaggtaagc ccattttttc
     1921 agatagggtc tcagcgtaca aaaaaagaac acagcggcac caaaatgatt tgttgcgtgt
     1981 gaagagggaa aactgtatcc gccgctgcaa tgatttacga tcatccgcac gtgctcctca
     2041 agtgcagggt cctggcaggg gcgtaacctg ggtatccact gcttaacgta agtgctgctg
     2101 aactgatcag tgatagttac gttgatgatg acgaacaata tccatgtcca tgatttccac
     2161 ccaaaattta taagaatgaa tattagcagg aacaaataca gcggatacca ggttgtggaa
     2221 tctcgccacc atggtaaaat gtgatcaaga aaagaactgg tccatgtatt gtttatcgcg
     2281 aagaataaat aagtgtccca cgtatgaaag gtattccaca tatagctaat gaatctttct
     2341 tgccaccatg atcattctcg gtgaatttct cacatggtat ttgttcagtt cataatcgcc
     2401 gaaaatatgt tcgatagcaa gaccttcata cgagagcata tctgtaaaat cacctaaaga
     2461 aaatttttct acctgctcag taaatgtttc gctaattttt ttttcagtct cttcaacatg
     2521 gatccgcttg aagaaatgtt tctcgtcaaa ccaccggtcg atattaaaca taacaccgtt
     2581 cgatcttttt tcttccctgg gcaccaggtg atcctccgca taatgtacgt tgaggtaatc
     2641 tatcgtaacg gtcccattca ttttaaggct ttgagccatg gtacgaattg cgtcatcgtg
     2701 ctcacgcatc gtgcggaagt agccaaaact tgtaaagaaa ttaaatacgt agtcaaaata
     2761 atttatccaa aacggcaagc gcatgtcgtg cacataaaaa tgcaggttgt ctgtctcaaa
     2821 atttttggct tcaattattg acggtgctga caagtcgata ccggtaacgt cgaaccctct
     2881 tgatgccaat gcgcggctat gcctgccttt accgcatgca acatccagta tgcggctcgc
     2941 agctgggatg tttaaaaact caacaaactt attaatacaa aacgtggcct cctgctcatt
     3001 tcgttggtta tagagcaagt cgtaataagg agaactgaac caggctctga accattcagc
     3061 ggcgaccatt ttgcaagttt tttttcgctg ttaaatataa cagctttctt tttttggttt
     3121 atataaacgt cttgtttttt ctgttatgtt tgccatccca aataaccgaa aaatgccgtt
     3181 gatcaaaagt atatcaggaa tacgaggtac gattggagga aaatccggcg attctctcag
     3241 cccggttgat actgtaaaat ttacggcagc gtatgcggtg tggctgaagc aacaaacagc
     3301 taaacaaatt tacacggtta ttgttggacg ggatgcgcgt atcagcggtg catttctgca
     3361 gcaactggtg atgaatacgc tcgttgcaag tggtgtgcat gtgatcgatc ttgacctaag
     3421 cactacgccc acggttgaaa tggctgttat ttctcataat gcggatggcg gcataatagt
     3481 cactgcgagc cacaaccctg ctgaatggaa tgcattgaaa ttgcttaacg gcaaaggcga
     3541 atttttgaac gcggcggacg gcgagcaatt gctggcaact gccgcagacg aacacttcaa
     3601 tttttctaca gtggagaaac ttggaactat aaccactgat ccggctgctt tagaaaaaca
     3661 tataaccgcc atcgtggagt ttccgcttgt cgacatcgct gctattaaaa agaaaaagtt
     3721 caggatcgtt attgatgctg taaacagcac gggcgcaatt gctgtgccgg cgcttttaaa
     3781 ggcattaggc gtgaaagacc tgattgtgtt gaatgaagaa atgaatggaa gatttgccca
     3841 caaccccgaa ccattgccgc aaaatctttc acagttaagt accgaggtga ggaagcagga
     3901 agcgcatttg ggcattgctg ttgatcccga tgttgacagg ctttgttttg tctgcgaaga
     3961 cggaagcatg tttggtgaag aatatacgct ggttgcagtg gcggattttg ttctgcaaca
     4021 aaaaaaagga aatacagtaa gcaacctgtc atcgacacgt gctttaaaag atatcacact
     4081 tagaaacggt ggcgaatatt ttccaagccc cgttggagaa gtcaatgtag ttgagaagat
     4141 gaagcaggta aatgctgtag tgggcggcga gggcaatgga gggatcatcg tgcctgatct
     4201 tcattatggc cgtgatgcgc ttgccgggat tgccttgttc ctgacttatc tcgctcaaag
     4261 caataagagt gcgttgcagt tacgcaggct atatcctgat tacttcatca gcaagaataa
     4321 aattgaggtc aataatgaca ttgacgtaaa
//
LOCUS       DASQJI010000725         3672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2254964,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000725 DASQJI010000000
VERSION     DASQJI010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254964"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..785
                     /locus_tag="VEV83_19345"
     CDS             177..785
                     /locus_tag="VEV83_19345"
                     /inference="COORDINATES: protein motif:HMM:NF024922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HYK47345.1"
                     /translation="MNTLFPLELSLPAGFLYYDDFLTEAEESKLLDEIAELELHNLTY
                     HGYKANRKVRSFGYDYNFESNKLTKGAPIPLGFEFLIQKITDHIGIQKNEVAELLVTE
                     YPVGSVINWHRDAPQFLLIAGISLLSDCIFRLRPYLKEQQTRSSIISFPVKRRSLYVM
                     KDAARNDWQHSISPVKSLRYSITLRTLRTPEKKEDPSDLSRL"
     gene            1181..>3672
                     /locus_tag="VEV83_19350"
     CDS             1181..>3672
                     /locus_tag="VEV83_19350"
                     /inference="COORDINATES: protein motif:HMM:NF024962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprB repeat-containing protein"
                     /protein_id="HYK47346.1"
                     /translation="MRNRLFSGIILLGVTSASAQTIDSVTHLYGIRQNWGGIPLSRSV
                     YPEIRGLLYNFKWKDIEPADNVWNWQQLDSVMINRDRGTPFQLMIFTKDYAPDWLFTT
                     GAVPKVTEYNSNNDSVGFSPYFADDDYKFYFERMIDTVANHVRAYPDIVKKYLSIQAC
                     IGEQLDYIGYRNVDQARALGLDTQTVHVDTQYKLTSNQLAVLFKEFTWHYYSAYLGSG
                     IPLLCNPSCSDANSQSNIYWVLDSLPGMNLRYAVPGKSFQINDELDRLPWLSPVLNSK
                     HNGDYIRANSDLANNDVNGGWWKMHTPRNMFTLFASMLHYGLDFSDQMPTYIRNPLYK
                     PAFDFFNKYAGEKDTATAAHAMCALHDGLDASDSIRFPAATYGKAIRSNGQRYLNIQN
                     DFASRGALEMDTARAKMKNDGTVGAIGTNDVGWRIIPGNYKRYLRQLYAYVTSVGYWN
                     VNASNDTNTIYGRFGRGFDVANGKNALYFDIDNGFMHYAPLDSQSPVMISVTYLDSGN
                     GSWQLFYDAQDSITKPSIAVNCTNSGTWKTASVTITDGYFGNRSDSLSDFYISNTGSE
                     NVIFALVEFERPDAFVNNVGLFSSDSLLFDTACTLSTSVAKPVVISGAFLDGSDVVVG
                     PFTGYKFSFFEDSAFNDSLVISNYGTSFEDSIYVQFNPTDSVSYTGDCPISGGGVPNG
                     RLPLAAIGIDSRPTLTAQVTNVSCFMAKDGSIDIVRHGGDGPYSYCWTNTGNFKDSAQ
                     DISNLSPSTYTVTVTSYAGCKMSESYVVTQPDPLIVSVVVDSMLCRNGTTTVHVTASG
                     GTRPYDGTGNFVVGYGKQTFTVTDAHGCTDSES"
BASE COUNT         1012 a          782 c          836 g         1042 t
ORIGIN      
        1 tacgggaccg ggttcaaaat gcaatgaacg acggaaaaac ttttgacgaa gtcgttgcga
       61 tggatccgac taaaggatat agcggcggaa tggacccaaa gagctttatc aaaacagttt
      121 atgattcttt aaaaaaataa ctagagactg gccgggaaat tgtcgtatga cattagatga
      181 atacactttt tcctttagaa ttgagcttgc ccgccggttt cttatattat gatgactttc
      241 taactgaagc ggaagaaagc aaattgcttg acgagatcgc agaactcgaa ttacataatc
      301 ttacctatca cggttataag gccaatcgaa aagttagaag ctttggttac gactataatt
      361 ttgaatcaaa caaactaacg aagggtgcgc ccattccttt aggctttgaa tttctcattc
      421 aaaaaatcac ggaccatatc ggcattcaga aaaacgaagt tgccgagttg ttggtgactg
      481 agtacccggt tgggtcagtg ataaactggc atcgtgatgc accacaattt cttcttatcg
      541 ccggaatttc tttgctcagt gactgtatat tccggttacg tccatatctc aaagaacaac
      601 agaccaggtc atcaataatt tcttttccgg tgaaacgccg gtccctgtat gtgatgaagg
      661 acgccgccag gaatgattgg cagcatagca tctcgcctgt aaaatcattg cgatattcta
      721 tcacgctgcg cacgttaaga acgccggaaa agaaagaaga tccatctgat ttgagtcgcc
      781 tataaaaatt ttattagttt cccggccaac tgtgaataac tttttgatac ttgaaaaact
      841 atccacaata agaattgctg acgttgttgt ttttattttt agaggctaat ttttacgcga
      901 aaaaaagtta ctgacgcctt gacaaagacg tgtgtttaga aaatcttgta tccctgcata
      961 gccgctttgt atttcgtttc cctttaagcg gctatttcat ttaagcacga tgttttaaat
     1021 gtcaggatcg ggtcggtttt gtcttttttg gttattggct taccggaatc tttgtgtgat
     1081 ttcttgtaca gcttaatatt tttatccgtc caaaattaac gaaccgaagc tgctgcttga
     1141 atttttcgaa cagctcccac gaaaatccac atatcgtcgt atgagaaacc gattattctc
     1201 tggaataatt ctgcttggag tcacttctgc atctgcacaa accatcgatt ccgttacaca
     1261 cctttacggc attcgtcaaa actggggcgg cattccgctg agccggtctg tttatcccga
     1321 gatccgtgga cttctttaca actttaaatg gaaagatatc gagcctgcag ataatgtctg
     1381 gaactggcag caacttgata gtgtgatgat caaccgggac cgcggcacac cttttcagct
     1441 catgatattt accaaagact atgcacctga ttggctattc acaacgggcg cagtgccgaa
     1501 ggttacagaa tacaacagca acaacgattc ggttggattt tcaccttatt tcgccgacga
     1561 cgattacaag ttttatttcg aaagaatgat cgataccgta gcaaaccatg taagggctta
     1621 cccggatatc gtaaaaaaat atttgagcat ccaggcctgt atcggcgagc agttagatta
     1681 tataggttat agaaacgtgg atcaagcccg tgcactgggt ttggacaccc aaacggtaca
     1741 tgtagatact caatataaat taacgtcgaa ccagttggcc gtcctgttca aggaatttac
     1801 ctggcattac tatagcgcct atcttggcag cggcattcct cttttatgta acccttcatg
     1861 ctcggatgca aacagtcagt caaatattta ttgggtgctc gattccttac ccggcatgaa
     1921 tcttagatat gcggtgcccg gcaaatcatt tcagataaat gatgagctgg atcggttgcc
     1981 gtggttaagt cctgtgttaa acagcaaaca taacggagat tacatccgtg ctaattcaga
     2041 tctggctaac aacgatgtga atggtggctg gtggaaaatg cacacgccca ggaacatgtt
     2101 cacgctattt gcttcaatgc ttcattatgg cttagacttc tcggaccaga tgcccacata
     2161 tatcagaaac cctctgtata aaccggcttt cgatttcttt aataaatacg caggagaaaa
     2221 agataccgcc actgctgcac acgcgatgtg cgctttgcac gatgggctag atgcatccga
     2281 ttcaattcga tttcctgcgg caacatatgg caaggcgatt cggtcaaatg gccagagata
     2341 tttaaatatt caaaatgatt tcgcatcgcg tggcgcatta gagatggata ccgcacgcgc
     2401 caaaatgaag aacgacggaa cggtaggcgc aatcggtacg aatgatgtgg gatggcggat
     2461 catccccggc aattacaaac gatatcttcg gcagctatat gcttacgtaa caagcgttgg
     2521 atactggaac gtgaatgctt cgaatgacac aaatacaatt tatggaagat ttggccgcgg
     2581 ctttgatgtt gcaaacggaa agaatgctct gtattttgat atcgataatg gattcatgca
     2641 ctatgctccg ctcgacagtc aatcccctgt gatgatctcc gttacgtatc tcgattcagg
     2701 caacgggagc tggcaattgt tttacgacgc acaggatagt atcactaagc catcgatagc
     2761 tgtcaactgc acaaatagtg gtacgtggaa gactgcttct gttacgatta ctgacggtta
     2821 tttcggaaac aggagtgata gcctgtcgga tttttatatt agcaacactg gtagcgaaaa
     2881 tgtgatattt gcgttggttg agtttgagcg tcctgatgca ttcgtaaaca atgttggctt
     2941 attctcatcc gattctttgc ttttcgatac ggcctgtacg ctcagcacaa gtgtggccaa
     3001 accggttgta atatccggtg cattcctgga tggatcggat gttgtagttg gtcctttcac
     3061 cggatacaaa ttctcttttt tcgaagacag tgcattcaac gactcgttag tgatcagtaa
     3121 ctatggtacg tcattcgagg attcgatata tgttcaattc aatccaaccg actctgtttc
     3181 ttatactggt gattgcccga tatcaggagg cggtgttccg aatggacgat tgcctcttgc
     3241 cgcaattggc atcgacagca ggccgactct tacggcgcag gtgacaaacg taagctgttt
     3301 catggcgaaa gacggttcca tcgacatagt aaggcatgga ggcgatggtc cttacagcta
     3361 ttgctggact aacactggta attttaaaga ttccgcgcag gatatcagca acctgtcgcc
     3421 gtccacctac actgttacag tgacttcgta tgccggttgc aagatgagcg aaagctatgt
     3481 agtaacgcaa cccgatccgt tgatcgttag tgtcgtcgta gatagtatgc tgtgcagaaa
     3541 cggtactact accgtgcatg tgacagcttc aggtggtacg cggccatatg atgggacggg
     3601 caattttgtt gtcggttacg gaaaacaaac gtttacagtg actgacgcgc atggttgcac
     3661 tgatagtgag tc
//
LOCUS       DASQJI010000726         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2868612,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000726 DASQJI010000000
VERSION     DASQJI010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868612"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VEV83_19355"
     CDS             complement(<1..305)
                     /locus_tag="VEV83_19355"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47347.1"
                     /translation="MSQKILIVDDEPHIRMLIGQTLEELEDEGVDFFTAENGEQALEI
                     INEENPQLVFLDVMMPKLNGMEVCRRVKKELALNDVYVILLTAKGQELDRQKGQEVGA
                     "
     gene            complement(336..>2157)
                     /locus_tag="VEV83_19360"
     CDS             complement(336..>2157)
                     /locus_tag="VEV83_19360"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47348.1"
                     /translation="NQKTNIITFPYQYGENNPPMKLGEGLTSKIILTKEPLLINKDVQ
                     EQTVQLGIKRVGIPASSYLGVPIPVGDEIIGVLSVQSTERENVFDENDLRLLSTIAAS
                     VGVALRNATLFDEVQHAKMEADTARKTAEKANEAKSAFLSTVSHELRTPLTSVLGFAK
                     IIRKRLEEKIFPLTDSSDAKTSKTIQQVKENLDVVVSEGERLTTLINDVLDLAKIEAG
                     KMEWNFENVKMAEVAERAIAATTSLFDQKNLVLKKNIKAELPEISGDRDKLIQVMVNL
                     ISNAVKFTPAGTVTCNVQKKGKEIVVAISDTGIGIAPDDHKAVFEQFKQVGGDTLTDK
                     PKGTGLGLPICKEIVEHHGGRIWLESEHGKGSTFFFALPATKSEVVKPLHFEDLIKQL
                     KEQMAQSPLKTNGKGTTILVVDDEDSIRSLLRQELGEGGYHIEEASNGKEALAKVRVN
                     RPDLIILDVMMPEMNGFDVAAILKNDPQTMDIPIIVLSIVQDKARGYRIGVDRYLTKP
                     IDTTSLFAEVGTLLEQGKSKKKVLVVDEDGTAVKALSDVLQAKGYSVVESDGKELVAK
                     AVSTQPDIIILNSVLSGKQEIVQSLRFEKGLENVLFLIYQ"
BASE COUNT          492 a          551 c          415 g          699 t
ORIGIN      
        1 gccccaactt cctgtccctt ttgccggtct agctcttgtc ccttagccgt aagtaatatt
       61 acatacacat cattcaacgc gagttctttt ttcacgcgcc tgcacacttc catgccgttc
      121 agcttcggca tcatcacatc aagaaaaacc aactgcggat tttcttcatt aataatttcg
      181 agcgcctgct ctccattttc tgctgtaaaa aagtcaacgc cttcgtcttc cagttcttcc
      241 agcgtttggc cgatcagcat tcggatatgc ggctcatcat ctacgatcaa aattttttgt
      301 gacattttct ttatttaaag ctttggtttg atttattatt gatagatcag gaacaaaaca
      361 ttttccagcc ctttttcaaa acggagcgat tgcacaattt cctgtttgcc cgaaagcaca
      421 gaattaagga tgatgatatc cggttgcgtt gagacagctt ttgcgaccag ttctttgccg
      481 tctgattcaa ctaccgaata accttttgcc tgcaatacat cgctgagcgc tttcaccgct
      541 gttccatctt catccactac caatactttt ttctttgact taccctgctc aagcaatgtt
      601 cccacttccg caaacaatga agttgtgtca atgggttttg tgagatacct gtcgacacca
      661 atcctgtacc cgcgtgcttt atcctgcacg atcgataata cgatgatcgg aatatccatg
      721 gtctgcggat catttttcaa gatggctgct acatcaaacc cattcatctc cggcatcata
      781 acatccagta tgataaggtc gggcctgttg acgcgtactt ttgcaagcgc ctccttacca
      841 ttactcgctt cttcaatgtg ataaccacct tcgcccaatt cctgccgcaa taaagaacga
      901 atgctgtctt catcatcaac aacaagtatc gttgttcctt ttccattagt ctttaatggt
      961 gactgcgcca tctgctcttt tagctgcttt atcaggtctt cgaagtgcag cggtttcacc
     1021 acttctgatt tagttgcagg cagtgcaaaa aagaacgtac ttccttttcc atgttcgctt
     1081 tcaagccaga tccttccacc atgatgttcg acaatctctt tacagatggg caaccctaac
     1141 ccggttccct ttggtttgtc ggtgagtgta tcgccgccga cttgcttgaa ctgctcaaac
     1201 acggctttat gatcatcggg cgcaatgccg atccctgtgt cggatatagc caccacgatc
     1261 tcttttccct ttttctgcac gttgcaggtt acagttcctg ccggtgtgaa cttaacagca
     1321 ttcgaaataa gattcaccat tacctggatc agcttatcgc ggtctccgga tatttcaggc
     1381 aactcagctt tgatattttt tttcaggacg agatttttct gatcgaataa cgatgtggtt
     1441 gcggcaattg ctctttctgc gacttcggcc attttcacgt tctcaaaatt ccattccatt
     1501 tttcctgcct cgatctttgc caggtcaagc acatcattaa taagtgtggt aagacgttct
     1561 ccttccgaaa ccacgacgtc cagattttct tttacctgct gaatcgtttt ggacgtcttt
     1621 gcatctgaac tgtccgtgag cgggaatatt ttttcttcaa gcctcttcct gatgatcttt
     1681 gcaaaaccaa gcacagaagt gagcggcgtg cgtaattcat ggcttaccgt agacaggaat
     1741 gcgctttttg cttcgttcgc tttttctgct gttttgcgcg cggtgtctgc ctccattttc
     1801 gcatgttgca cctcatcgaa taaggttgcg tttcgcaagg caacaccaac tgaagctgca
     1861 atcgttgaca acagccgcaa atcattttca tcaaacacat tttcccgctc ggtactttgc
     1921 acgcttaata caccgatgat ctcatcaccg accggtatag gaacacctaa gtaagaggat
     1981 gcgggaatgc ctacacgttt tatacccaat tgaaccgttt gttcctgaac atctttattg
     2041 atgagcagcg gttcctttgt gagaatgatt tttgaagtga gcccttctcc aagtttcatt
     2101 ggcggattgt tttctccgta ctggtatggg aaggttatga tattggtttt ttgattg
//
LOCUS       DASQJI010000727         2428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1330843,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000727 DASQJI010000000
VERSION     DASQJI010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330843"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..1190)
                     /locus_tag="VEV83_19365"
     CDS             complement(252..1190)
                     /locus_tag="VEV83_19365"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HYK47349.1"
                     /translation="MINEVFEFPQQTSFYKGKVRDVYTIGETLLVMVASNRISAFDVI
                     LPKLIPYKGQVLNQIAAFMLNATKDICPNWLLEAPAPNVSIGKKCVPFKIEMVVRGNL
                     VGHAWRTYSSGKRVLCGAQMDEGLRENDFFSAPIITPSTKAEAGHDEDISPAEIISNG
                     LATQEEWQVLTNSALQLFARGKEIAATHGLILADTKYEFGKLNNEIVLMDEVHTPDSS
                     RYFYADGFEERQAKGARQKQLSKEFVREWLIANNFMGKEGQTVPEMDDDWVNTISKRY
                     IELYETVIGEKFIPQKLSDADTYNKIVESLNRMKHI"
     gene            1325..>2428
                     /locus_tag="VEV83_19370"
     CDS             1325..>2428
                     /locus_tag="VEV83_19370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYK47350.1"
                     /translation="MRKLQIALLASIIYCMAGSNAFAQAQVIINGNIKNSQTKENLSA
                     VSVTIKGSTVGTYSDEKGNFRLVTTRNPPFSVVISSIGYTDKEVNITSAAEPVNVELE
                     PSYALGQEIVVAASRLPQRILESPVTIERLNANALRNAPGPNYYDALGNLKGVDVTSS
                     SYTFKTVSTRGFNGSGNLRFNQLVDGMDNAAPALNFSVGNVIGLTELDVDNMELLSGA
                     SSALYGSGGMNGTLLITSKDPFKYQGFAIQVKEGVMHIDDYRHKASPFHDFSMRWGKK
                     ISDKFAFKIGAEYIKADDWEADDSTDLLRNNVFSKIKPGTRATDPNYDGVNVYGDEVS
                     ADLTIAGLFPISRTGYYEKDLVDYDAYNFKVSGG"
BASE COUNT          689 a          528 c          530 g          681 t
ORIGIN      
        1 tgcgaagaat gcaagcaaaa atacgatggc tgctgcagca tggaatgcaa ggacacgatc
       61 aacctgccac tcgaaaggca aaaacaaatt cgtaaaggcg tcgacaaggg cagaaacgta
      121 ttcaataaaa gcaggtcgag actgaggccg cggttaaacg aattgccgga ttaaaatttt
      181 gactgatcaa gcaaatggga aagtaggaag acggaagacc gggagacgga aagtccgggt
      241 gaggcgttca atcagatgtg cttcatcctg ttcagtgatt cgacaatttt attataggta
      301 tctgcgtcgc tcagtttttg tggtataaat ttttctccga tcaccgtttc atacaattca
      361 atgtatcgct ttgaaatggt attgacccaa tcatcgtcca tctccggaac tgtttgacct
      421 tccttcccca tgaaattatt tgcaatcaac cattcgcgaa caaattcttt actgagctgc
      481 ttttgccgtg cacctttcgc ctgtcgttct tcaaaaccgt cagcataaaa atatcgcgaa
      541 ctatctggcg tgtgcacttc atccatcaat acaatttcgt tgtttagttt tccgaactca
      601 tattttgtat cggcaagtat taaaccatgc gttgctgcga tctcttttcc gcgcgcaaat
      661 aattgcaatg cggagttcgt caatacctgc cattcttctt gcgtcgcaag accgttggaa
      721 atgatctcag ccgggctaat gtcctcatca tgtcctgctt cagccttcgt acttggtgtg
      781 ataattggag ccgaaaaaaa atcattttct cttaggccct cgtccatttg cgctccgcac
      841 agcacccttt tgccgctgct gtaggttctc catgcatgac caacaagatt gccccgcacc
      901 accatttcga ttttgaatgg gacacatttt tttcctatcg acacattcgg cgccggtgct
      961 tccaataacc agtttggaca aatatccttt gtagcattca gcataaaagc ggcgatctgg
     1021 ttaagcactt gccctttgta agggatcagt ttaggcagta ttacatcgaa cgcagaaatc
     1081 ctgttgcttg caaccattac aagtaaggtt tcaccgatcg tgtaaacgtc tcttactttg
     1141 cccttgtaaa aagatgtttg ctgtggaaat tcgaagactt catttatcat gtcacaaacg
     1201 tacaagacta aatcgaacaa caaaagggaa cggaaaaatt caaccggtac gtgtttgcca
     1261 ttagtatatt tttttccgtt tgcagtgaac aattcttata ttgcttaaca ttaaaatcct
     1321 ctttatgaga aaattgcaaa ttgctttgct tgcttcgatt atatactgca tggcaggttc
     1381 aaatgctttt gcccaggccc aggtaattat taacgggaat attaaaaaca gccagaccaa
     1441 agaaaatctt tcagccgttt ctgtaacaat caaaggaagt actgttggaa cttactctga
     1501 cgaaaaggga aattttcgac tggtcaccac gagaaaccca cccttcagcg tagtgataag
     1561 ttccatcggt tacactgaca aggaggtaaa cataacaagt gctgctgagc cagtgaatgt
     1621 tgaactcgaa ccttcgtatg ccctagggca ggaaattgtg gttgcagctt cgcggttacc
     1681 tcaacgcatt ctcgagtcac ctgtaactat agaacgatta aatgcgaacg cactccgaaa
     1741 cgcgcccggt ccgaattatt atgatgcatt gggaaattta aaaggagtag atgtcaccag
     1801 ctcgagctat acatttaaga cagtatccac gcgcgggttt aatggcagtg gtaacctgcg
     1861 ttttaaccag ttggtggatg gaatggacaa tgctgcacca gctcttaatt ttagtgtggg
     1921 caatgtgatc ggtttgactg agctggatgt cgacaacatg gaactgcttt ccggcgcatc
     1981 ttccgcttta tatggctccg gtggcatgaa tggaactttg ctgattacga gtaaggaccc
     2041 tttcaaatac cagggcttcg cgatacaagt aaaagaggga gtcatgcaca ttgatgatta
     2101 caggcataag gcctctccct ttcacgattt tagcatgaga tggggtaaaa agatttccga
     2161 caaattcgcg tttaaaatag gcgctgaata tataaaagca gacgattggg aggctgacga
     2221 tagcaccgat cttttgcgta ataacgtttt cagcaaaatt aaaccgggca cgagagctac
     2281 tgatccaaac tatgacgggg taaatgtgta tggagatgaa gtaagcgctg atctaaccat
     2341 tgcagggctt tttccaatca gccgaaccgg ctattatgaa aaagatcttg ttgattatga
     2401 tgcttataat ttcaaagttt ccggcggt
//
LOCUS       DASQJI010000728         4645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_718425,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000728 DASQJI010000000
VERSION     DASQJI010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718425"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2256
                     /locus_tag="VEV83_19375"
     CDS             <1..2256
                     /locus_tag="VEV83_19375"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47351.1"
                     /translation="MWVQDELSYDSFHHNAANIYKINSHLGTGDAAQVWEGSPAPLAV
                     FSKQVPEVQNAVRVNNFYEPVLFTYKDKKFKESNLAFVDPQFFSVFDFKLLQGDRVKP
                     FPEINSIIVTSSEAHKYFGDANALGQVLTTDYGDFRVSGVMQDFPENSSMKYDMIMPM
                     AFYAGLFTKWGGNGDWKTIDEDLGNFSYHIYLQLQRDASSDVVAKKLTTIFHDKKGPE
                     SKDDFFTLQPLRSSHLVAADGSNGALQTVRIFFVVAILILCIACINYVNLSTARAMLR
                     SKEVSVRKIIGAARFQLFMQFIAESALLFLLASWVAFALIYLLLPLYNDISGKHLLFT
                     LANKDVWFVSGFAIVATLIMASVYPALLLSSFKPIQSLKGKLSFGIGNTSFRKVLVVT
                     QFIFSVGLIIATIVVSYQMKFVREKNLGFDKEHVFSFTLTQQLHDHFDAALAELRKQP
                     GISGIASSGNSIAGVNSTTGDTYWNGKKEGSTFLIHPNSIDQNFIPLLKMHMVSGQNF
                     TGSKEDSTHFILNETAVRQAGIKDPIGKNFSLWDLKGTIIGVVNDFNYASLKEAIEPA
                     IFYYNPPNWRIYIKTTAKDAAQAIAGAQKVWKQFSPDYPFEYSFLDDDFSRMYQADQR
                     TGTLFNVFAAVAILISCLGLFGLATYTAQVKTKEIGIRKVLGATVTNITQLLAKEFIV
                     LVFISFVIAAPVAWFAMNKWLENYAYRVHISWWIFFVTGVLATAIALLTVTVQAIKAA
                     VANPVKSLRTE"
     gene            2406..>4645
                     /locus_tag="VEV83_19380"
     CDS             2406..>4645
                     /locus_tag="VEV83_19380"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47352.1"
                     /translation="MFRNYLKTSLRNLIRNKGYAGINVTGLAIGMAACVLLFIVVRYE
                     LSYDKFQPDYQNIYRVVTQDKYQDGIDYTPGTPFPVLDALRVDIPQITVGALYASYGS
                     QVTVVGKGEAAGTSQKKFIESSGLFFADPQFFAVFHFTWLTGSPSVLSEPNKTVLTKR
                     MAEKYFGNWHDAVGQFLKLDNTLTLEVAAILEDVPANSDFPLGMVTSYVSLKNTEFYG
                     YSTDWGRTTSNEQVYVKLPGNVSAENINNQLLQFGKKHYREDKSNERTNFLQPLSQIH
                     FDDRFGNFGDHVTTRSTLWTLSLIGIFIIVMACINFINLATAQAVNRSKEIGIRKVLG
                     SNRWKLFWQMMGETAIIVFVALILAVVIADICLPFIKHIDSIEEPLNIFTTRTLLFVG
                     ITGIVVTFFSGLYPSLVMSGFSPMSALKNKITSATIGGISLRRGLVITQFAISQVLII
                     GTIVAISQMSFVRTADLGFNKNAVFVLSGNADSVVISRQQAFKQQLLQIPGVQSASFS
                     SDVPSSDNNWGTNFFFDHGPELNYTLYFKCADEDYFKTFGLQFAAGHGYSASDTMKDV
                     VINETLVKKLGLKSDNDAIGKQIRMGARDPWRTIVGVVKDFKTNSLRYEIKPTLIGPK
                     KRFYSNTSIKIRSSNLVGTKEAILKTWDKYYPEYATTSYFMDESINNFYLQENQLSLL
                     YKIFAGIAIFISCLGLYGLVSFMAVQRTKEVGIRKVLGASIKNIVYLFSKEFTILIGV
                     AFIIAAP"
BASE COUNT         1314 a          951 c         1058 g         1322 t
ORIGIN      
        1 atgtgggtgc aggatgagtt gagttatgat agttttcatc acaacgccgc aaatatttac
       61 aagatcaatt ctcacctcgg aaccggcgat gccgcccagg tatgggaagg ttcgcctgcg
      121 ccactggctg tctttagcaa acaggtgcct gaagtgcaga atgcagtgcg cgtaaataat
      181 ttttacgagc cagtcttatt tacgtacaag gacaaaaaat ttaaagaatc aaacctggcg
      241 tttgtcgatc cgcaattttt ttctgtattc gatttcaagc ttctgcaggg cgacagggta
      301 aaaccttttc ctgagatcaa ttcgattatt gttacgtcat ctgaggcaca caagtatttc
      361 ggcgatgcaa atgccttagg ccaggtatta acaaccgact acggagactt cagggtaagt
      421 ggtgtaatgc aggatttccc ggaaaactcg agcatgaaat atgatatgat catgccgatg
      481 gctttttatg ccggcttatt cacgaaatgg ggcgggaacg gcgactggaa aacgatcgat
      541 gaagatcttg gaaacttttc ttaccatatc tatctgcaac ttcaacgcga tgcttcttca
      601 gatgtagttg cgaaaaagtt gacaacgata ttccacgaca aaaaaggacc cgagtcgaag
      661 gatgattttt tcacccttca gccgctgcgc tcatcgcacc ttgttgctgc cgacggcagc
      721 aacggagcgc ttcaaaccgt gcggatattt ttcgtagtgg ccattctgat cttatgcatt
      781 gcgtgcatca actatgtaaa tctgtcaacc gcgcgtgcga tgcttcgctc caaagaggtg
      841 agcgtgcgaa agataatcgg tgccgcgagg tttcaattgt tcatgcagtt cattgccgaa
      901 tcagctttgt tattcctgtt agcctcctgg gttgcgtttg cccttattta tttgttgctt
      961 ccattatata atgatatctc aggcaagcac ctcttgttta cgcttgctaa taaagacgtc
     1021 tggttcgttt ccggttttgc gattgttgcc acactcataa tggcaagtgt ttatcccgca
     1081 ttattactat catcgtttaa gccgatccaa tctttaaaag gcaaactttc ttttggtatt
     1141 ggcaacacat cattcagaaa agtgttggtg gtaacgcaat tcattttttc cgtgggttta
     1201 ataattgcca cgatagtcgt tagctatcaa atgaaatttg taagagaaaa gaaccttgga
     1261 tttgataagg aacacgtatt ttcttttacg ttgacgcagc aattgcatga tcacttcgac
     1321 gctgcattag cagaactccg caagcaaccg ggaatatcag gtattgcttc atcggggaac
     1381 agtattgcag gcgttaactc cacaaccgga gatacttatt ggaacgggaa aaaagaaggc
     1441 agcacttttt tgatacatcc caattctatc gatcagaatt ttattccatt gttgaagatg
     1501 catatggtgt cgggtcaaaa cttcacaggt tcgaaagaag attccactca tttcatctta
     1561 aacgaaactg ccgttagaca ggccggtatc aaagatccca tcggcaaaaa tttcagttta
     1621 tgggacttga aaggaactat catcggtgta gttaacgatt tcaactacgc ttcgcttaag
     1681 gaggcgattg aacctgcaat attttactat aatccaccga actggaggat ctatattaaa
     1741 acaacagcta aagatgcggc gcaggcgata gcgggcgccc aaaaagtatg gaagcaattc
     1801 agtcctgatt atccgtttga gtatagtttt ctcgacgatg atttcagtcg aatgtaccag
     1861 gctgaccagc gaaccggaac tttgttcaac gtgttcgcag ccgtggcaat cctgatctcg
     1921 tgcctgggac ttttcggctt ggctacatat accgcgcaag tgaaaacgaa ggaaatagga
     1981 ataagaaaag tactgggcgc caccgttaca aacatcactc aactgttggc aaaagaattt
     2041 atcgtgcttg tctttatctc attcgttatc gccgcgccgg ttgcgtggtt tgcgatgaac
     2101 aaatggctgg agaattatgc ataccgggta catatcagct ggtggatctt tttcgttaca
     2161 ggagtactcg ctactgcgat cgctttgctt acggtaacag tgcaggctat caaagcagcg
     2221 gtggctaacc cggtgaagag tttgagaact gaatgatgaa tgatgaatga gtgatgaata
     2281 atgaatatgc agtgatgagt gatgagtgga ggctgtcaat tatgaggggt gaattgtcaa
     2341 cggcataata agcgttattc atcagtaaca attaagatca acacaaataa caacaagttg
     2401 tatcaatgtt taggaactac ctaaaaactt cccttagaaa tttaattcgt aacaaaggtt
     2461 acgcgggcat taatgttact ggccttgcga tcggcatggc ggcatgtgtc ttacttttta
     2521 tcgtagtacg atatgaatta agctacgata agtttcaacc cgactatcaa aatatttatc
     2581 gtgtggtgac gcaggataaa taccaggatg gcattgatta tacacccggc accccctttc
     2641 ccgtattgga tgcattacgt gttgatatcc ctcaaataac agtcggagct ttatatgcca
     2701 gctatggaag ccaggtaaca gttgtaggga aaggggaggc ggcaggcact tctcaaaaaa
     2761 aattcattga atccagcggc ttattttttg cagacccaca attcttcgct gtatttcatt
     2821 ttacatggct tacgggcagc ccttcagttt tatcggagcc aaataagaca gtgcttacaa
     2881 aaagaatggc tgaaaaatat tttgggaact ggcatgatgc agttggtcaa ttcctaaaac
     2941 tggataatac gctcacttta gaagttgccg caattttaga ggatgttccc gctaattcag
     3001 actttccgct tggtatggtt acttcttatg tcagccttaa gaacaccgag ttttatgggt
     3061 attcaacaga ttggggacgc acaaccagca acgaacaggt gtacgttaag ttgcccggaa
     3121 atgtgtcggc agaaaatatc aacaatcaat tattgcaatt cggcaagaag cactatcgcg
     3181 aagataaatc gaacgaaaga acaaattttc ttcaaccgtt gagccagata cattttgacg
     3241 atcgcttcgg caactttggt gatcacgtga caacaaggtc gacgttatgg acgctgtcgc
     3301 tgataggcat tttcattatt gtgatggctt gcatcaactt cattaatctt gctacggcgc
     3361 aggctgtgaa ccgctcaaag gaaatcggta taagaaaagt tcttggcagt aaccggtgga
     3421 aacttttttg gcagatgatg ggcgagactg cgatcattgt tttcgtcgca ttaatattag
     3481 cggtcgtcat cgccgatata tgcctccctt tcataaaaca tattgactct attgaggaac
     3541 cgctaaatat tttcaccaca cgtacactgc tttttgttgg gatcaccggt attgtggtca
     3601 catttttctc cggtctttac ccttcgttgg taatgtccgg atttagcccg atgtcggcat
     3661 taaaaaacaa gatcacatct gcgaccatcg gtggtatctc attaaggaga gggcttgtta
     3721 taactcaatt cgctatttca caggtactga taattgggac tatcgttgct ataagtcaaa
     3781 tgagttttgt gcgaactgca gacctgggct ttaataagaa cgcggtgttt gttttaagcg
     3841 gtaacgccga cagcgtagtg atctcaagac agcaggcatt caagcagcag ttgttgcaaa
     3901 ttccgggcgt tcagtctgcg tcattcagca gcgatgtgcc gtcatccgat aacaattggg
     3961 gaactaattt cttttttgat catggacccg aactcaatta tactttatat ttcaaatgcg
     4021 ccgatgagga ttattttaaa acgttcgggt tgcagtttgc cgcaggtcac ggttacagtg
     4081 cgagcgatac catgaaggat gtggtcatca atgaaacgct ggtaaaaaaa cttggactaa
     4141 aaagtgacaa cgacgccata ggtaaacaga taaggatggg tgccagggac ccctggcgaa
     4201 caattgttgg ggtggtgaaa gattttaaaa ccaattctct tcgctatgaa ataaagccca
     4261 cgttgatcgg ccctaaaaaa aggttttaca gtaacacttc aataaaaata agaagctcga
     4321 atcttgtcgg cacaaaagag gccatcctaa aaacgtggga taaatattat cccgagtatg
     4381 caaccaccag ttacttcatg gatgaaagca tcaataactt ttacctgcag gagaaccaac
     4441 tgtcgttgtt gtataaaatt tttgccggca tcgccatttt catttcgtgc ctgggcttgt
     4501 acggattggt ttcatttatg gctgtacaac gtacaaagga agtgggtatt cgaaaggtgc
     4561 tgggcgccag cataaaaaat attgtgtacc tcttttcaaa agaatttacg atccttatag
     4621 gtgtcgcttt cataatagcc gcgcc
//
LOCUS       DASQJI010000729        13405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_103949,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000729 DASQJI010000000
VERSION     DASQJI010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 13405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13405
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103949"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..1553
                     /locus_tag="VEV83_19385"
     CDS             297..1553
                     /locus_tag="VEV83_19385"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK47353.1"
                     /translation="MKTENITQLVDHLFRNESGKMVAVLTKLLGIERLETAQDIVQDT
                     LLKAMAVWSYSGAPKNPGAWLYHVAKNNAIDYLRREKTFKKIGSELSKLRGIEIIASP
                     ELEHIFLENEIQDSQLRMMFACCHPQIPQESQIALALKTLCGMSVHEIANAFLTSDET
                     IAKRIYRAKEKIRNEGIKLEVPPPTLMLQRLEAVLQTLYLLFNEGYNSSHPDKLIRED
                     LCENAMRLCHLITQHSGINNSSIKALLALMCFQSSRLQSRIDERGSIITLKYQDRSTW
                     NRQLIQKGFDYLDEATESDNFSAYHLEAAIASQHSVAPSFEQTDWKTVYHLYEVLYAI
                     KPTPVIALNKAIASAYAISMQSALEALHKIKGLEKHYLYFATLGEMCFGLNKKEEAKN
                     YFTKALGLTTSRSERQLLNEKIISCN"
     gene            complement(1680..3200)
                     /locus_tag="VEV83_19390"
     CDS             complement(1680..3200)
                     /locus_tag="VEV83_19390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47354.1"
                     /translation="MEKEKNTSSEKSLTRGEFIKNSALATAGFYIVPRHVLGRGYVPP
                     SDKLYIACVGCGGEGENDIHHYANAPKKNAVIAFLCDVDERMAAPRRKEFPAAGFYHD
                     WREMFDKEQKNFDAVSVAIPDHNHAIVGLSAMQMKKHLYLQKPLTHDIFEARILTQAA
                     SKYKVVTQMGDQGASCDGMRTLREWFDAGLLGDIHTVYNWTDRPVWPQGIPWPSVHPP
                     VPKELKWDLWLGTAQYTDYVDNLVPFNWRGWWQFGTGALGDMACHIIGPSFKLFQLGY
                     PTEVTCSATIVYSGKFTEGDYPDSIPPSSVLRYTFKLKDGRDLKLYWMDGGIAPDRPD
                     ELDPDVNMNNELAFVKEENSFEGGTIFIGTKGKAACGWGGAYPKLLPLSLNKDVNIPK
                     KYPRIEGGMDGHWWQWIDACIAGYGNMEVDSPFEGYAGPLTETVLMGNLLLRCFNMRK
                     KSKRKDPVYGEVEEVETPGRYIAYKWDGENMRITNFEPANQFIKREYRKGWGEMKL"
     gene            complement(3303..4025)
                     /locus_tag="VEV83_19395"
     CDS             complement(3303..4025)
                     /locus_tag="VEV83_19395"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK47355.1"
                     /translation="MNKSIALSILIVGCLTFNFASGQNNTLTAKEKDDGWQLLFNGKD
                     LQGWHSYKQTKPGKAWQVDNGMIFLNKNSNSVYEDFADLVTDNEYDNFHLKLEWKMEP
                     CANSGVMFYVHESNEFKDTYESGPEMQIADLACNDDGRILKCRAGDLYDLVPCDTEWV
                     NAAPEWNTYEIIANHGHLTLIQNGHVVSKTKLWDKNWREMIKNTKFKEWPGFGTYKKG
                     HISIQGTENGKLWYRNVMIKEL"
     gene            4215..5372
                     /locus_tag="VEV83_19400"
     CDS             4215..5372
                     /locus_tag="VEV83_19400"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012929690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
                     /protein_id="HYK47356.1"
                     /translation="MLAMNYRGPYRIRADRNKPYPEIRHPNDAIVRVTRSCICGSDLH
                     IYHGLVPDTRVGMTFGHEFIGVVEEIGSSVQKLKVGDHVLVPFNIACGTCPFCKQELY
                     GNCHESNSEATAIGGIFGYSHSAGGYDGGQAEFVRVPYADVGPTIIPEEMDMEDAVLL
                     TDVVPTGYQAAEMGGIKTGDTVVIFGAGPIGIMAAKCSWLFGAGRVIVIDHLEYRLEF
                     VKNYAQCEVYNFKEMGDPVLFLKKATDYYGADVCIDAVGCEALGSALQTITGPKLMLQ
                     SGSATALWWAINSVKKGGIVSIVGVYGPTGNIVPIGNVLNKGLTIRANQASVKRLLPR
                     LIEHVMAGRIKPKEIITHRIPLEDVADAYHIFSSKLDNCIKPVLIPPLARA"
     gene            5383..5886
                     /locus_tag="VEV83_19405"
     CDS             5383..5886
                     /locus_tag="VEV83_19405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47357.1"
                     /translation="MENTLAENYKNINGWGIDADPENEPTYPMKKYNGADHERSDYQR
                     PEQQPVDEEVLHSNERPTVSAVFGTPLPPTGLSGVIRRFAFRFSEGQLAHWFPLILAD
                     RVNVVEGIIDDIRHGQFPNIFAEKGWKAEWKYNRSNAIKKVAVGAIVTSALIWWMTAK
                     KKKKNVF"
     gene            complement(5974..8349)
                     /locus_tag="VEV83_19410"
     CDS             complement(5974..8349)
                     /locus_tag="VEV83_19410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HYK47358.1"
                     /translation="MKKFILLLFLVTTINAFSQRTILFDEGWRFHRGDVANAEAIDFD
                     DSAWRKVDLPHDWSIEDLPGTNSPFNPDATNGVSVGFTTGGTGWYRKTFTLSPTEKNK
                     NIVIQFDGVYMNADVWLNGHQLRNHAYGYTFFFYDITGFMKWNQKNVLSVQVKNEGAT
                     SRWYAGSGINRHVWLIEKESVCVSTLPPFITTPQVSKASAKIDVRVLVQNETENTLNV
                     TLVNKIIDPQGKQVATTSTKQKVNYIGEFVFDDSTVLRSPALWSTEDPNLYKLVSEVY
                     VNGKLSDSVETKFGIRKISFDAVNGFMLNGTPVKLKGGCFHIDNGPLGARSFDAAEIR
                     RVALMKASGFNAIRCSHNPPAPAFLDACDSLGMMVIDEAFDMWNEGKNDNDYHLYFDR
                     EWKHDLAAMVCRDRTHPSIIMWSIGNEIVGMDKPEVADTAKLLADYVRLLDNTRPVTA
                     AVNSVSEKKDPFFSALDICGYNYAQDHYESDHQRKPERIMVATESFPLKAFDYWMGVI
                     DHPWVIGDFVWTGFDYIGEASIGWRGYWQEKNFYPWNLAYCGDIDICGWKRPQSFYRD
                     ALWKKDQLSIFVKPPQPSFPINPKKEDWSIWNWDDVVADWNWPGHEDSSFEVNVYSSC
                     DEVELFLNGTSLGKKSTNRSTEFMAVYNVRYAAGELKAVGHSSGKQVNESVLKTAAQP
                     SQIKLSVDKTEVKANNEDLSYVTVELLDERGVRNPRSENLIHFTIEGPGTIAGVGNAN
                     PVSLESYQLPQRKAWQGRCMVVVKSTNEKGEIILKASADGLKTATVTIESK"
     gene            8562..10244
                     /locus_tag="VEV83_19415"
     CDS             8562..10244
                     /locus_tag="VEV83_19415"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008741 - ribulokinase activity [Evidence
                     IEA];
                     GO_process: GO:0019569 - L-arabinose catabolic process to
                     xylulose 5-phosphate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HYK47359.1"
                     /translation="MARNKYVIGVDYGTDSVRSVILDALNGDEIASSVFHYPRWRDGL
                     YCEPQKNQFRQHPLDYVEGLVSTIKDCLNKSGPTVTKNIKAISVDTTGSTPVAVDEAG
                     TPLSLLPQFENNPNAMFVLWKDHTSTKEAAELNEHAAKFGIDYLQYVGGIYSSEWFWS
                     KLLHILRIDEEVRRACYSWVEHCDWIPFLLTGGNDVFKMKRGVCSAGHKALWAPEYGG
                     LPPNEFFATLDSLLDGFTKRLFIETYTSAEPAGNLSAEWAERLGLSTKVLVGVGAFDA
                     HMGAVGGQIEPYHLSKVMGTSTCDMLIAPVDEVENKLIKGICGQVRGSIIPGMMGMEA
                     GQSAFGDVYAWFRNMISYSLKTILQTSSVIDSTTADLLQRDFHENIISLLADEAAKLP
                     IEENDELAIDWLNGRRTPDANQALKGAISALNLGTDAPRFFRALVEATCFGAKAIVDR
                     FNEEGVPVKGLIGLGGVARKSPYIMQTMADVMNMSIRIHSSEQTCATGAAMFAATVAG
                     IYHRVEDAMAAMGKGFDAEYHPDVSKTELYSKRYEQYKRFGNLIESNLSAQR"
     gene            10255..11799
                     /locus_tag="VEV83_19420"
     CDS             10255..11799
                     /locus_tag="VEV83_19420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA];
                     GO_process: GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /protein_id="HYK47360.1"
                     /translation="MRKKIFVFSFCIFVSTHMFSQSSVQMTIHTDSANEKISRYIYGH
                     FAEHLGRCIYDGFWMCDSSVNPKQYKLRGEVIDALKKIRVPVLRWPGGCFADQYHWAD
                     GIGQYDKRPQTINTTWGMVTEDNSFGTHEFLGLCDSIKCEPYIAGNVGSGTPQEMANW
                     IEYLNFNGKSTLADLRREHGHSAPYKVSFWGVGNESWGCGGDMTPEFYSNEYKRFAEF
                     CKNYPGAPLKRIASGANGDDYNWTEVLMKNIPASQMWGISMHYYTLAGSWQHKGSATD
                     FDEKLYFNALRNCLRMDELVNKHSAIMDKYDPGKKLALVVDEWGIWTDVEPGTNPAFL
                     YQQNSLRDALIAATTLNIFNHHCDRVKMANLAQTVNVLQSLILTNKEHVLLTPTYYVF
                     DLYKVHQDAILLPITFNSPAYGLGNETIPAVNASASKDSTGAIHVTLVNLDAQKNNSV
                     DISLPVGAYKNIAGQILTSKKFNDVNTFDQPDKVKLASFTSYKKSANGLSVDLPPMSV
                     VLVTLK"
     gene            11917..12624
                     /gene="araD"
                     /locus_tag="VEV83_19425"
     CDS             11917..12624
                     /gene="araD"
                     /locus_tag="VEV83_19425"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase AraD"
                     /protein_id="HYK47361.1"
                     /translation="MSKYEHIQQAAYDANMQLPALGLVLFTFGNVSAADKELGVFAIK
                     PSGVPYSELSPNKMVVVDFDGKTVAGNLRPSSDTLTHAVLYKHFETIGGVAHTHSTYA
                     TAWAQSLRDIPIYGTTHADHLTCDIPCAAPMSDEMIAGDYEHQTGFQIIHALKERGLD
                     HKEVEMILVGNHAPFTWGKTADKAVYNSGVLEEIAKMAFITETLKADSLRLKDALIKK
                     HYERKHGAAKYYGQENE"
     gene            12670..>13405
                     /locus_tag="VEV83_19430"
     CDS             12670..>13405
                     /locus_tag="VEV83_19430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HYK47362.1"
                     /translation="MIDLKKLEVWFITGSQHLYGEETLKQVADHSQQIVNGLNESNEM
                     AVPVVFKPVVTTPDEIRAVCSDANVAKNCIGIIAWMHTFSPAKMWIGGLKILTTPLLH
                     LHTQFNRDIPWGEIDMNFMNLNQSAHGDREFGFIMSRLRMNRKVVAGHWKDPEIVHSI
                     DVWMRAAAAWYSWQGAKFVRFGDNMRYVAVTEGDKVEAEYKFGYTVNTHGVGDLVKVI
                     DQVSDSEVDALINEYEDGYEIVSSLTK"
BASE COUNT         3711 a         3006 c         3038 g         3650 t
ORIGIN      
        1 tactgatggt ccgtacactg aaggaaaaga agttgtgggc ggatatttta tcattaaagc
       61 aaccgattac gacgaggccg ttgccctggc gaaagattat cctgattttg aatatggcgg
      121 ctctgtggaa gttcggcagg tgatgaagat ggatatgtga tggagttaat ttattgggat
      181 attgggatat tgggagatta ggaagcctga atgaacaatt ccgctcgccg gcacactaat
      241 ttcccaataa acaaataacc caataaacca gtaacccagt agcccaatta accacaatga
      301 aaacagaaaa cataacccag ttagttgatc atctttttcg aaatgaatcg ggaaagatgg
      361 tagctgtgct gacaaaactg ttggggatcg aacgattgga aacggcgcag gatattgtgc
      421 aggatacatt gcttaaagcc atggcggttt ggagttacag cggcgcgccg aagaacccgg
      481 gagcgtggtt gtatcacgtc gcaaaaaata atgcgatcga ttatttgcgc cgcgagaaga
      541 ctttcaaaaa gatcggcagc gagctttcaa agctgcgcgg catagagatc atcgccagtc
      601 ctgaactcga acatatcttt cttgaaaacg agatacagga tagccagttg cgcatgatgt
      661 tcgcatgctg ccatcctcaa attccgcaag aatcccaaat tgcactcgcc ttgaaaacac
      721 tgtgcggcat gagcgtgcat gaaatagcca atgcatttct cacttccgac gagacgatcg
      781 caaagcgaat ttacagggca aaagaaaaga tcaggaatga aggaataaaa ttagaggtgc
      841 caccacccac tttgatgttg caaagacttg aggcggtact gcaaacgctt tatctgttat
      901 tcaacgaggg atataattcc tcgcacccgg acaagctcat ccgcgaagat ctgtgcgaaa
      961 acgcgatgcg gctttgccat ctcattaccc aacactccgg catcaataat tcgtcgatca
     1021 aagctttact cgcgttgatg tgttttcaat cgtcgaggtt gcaatcaagg atcgatgagc
     1081 gcggcagcat tatcacatta aaataccagg acaggtcaac atggaaccgg cagcttattc
     1141 agaaaggttt cgactacctg gatgaagcca cggaaagcga taacttttcg gcttatcatc
     1201 tggaagcagc gatcgcctcg caacattcag tcgctccttc gtttgaacaa accgactgga
     1261 aaacagttta tcatttgtac gaggtattgt atgcgatcaa gccgacaccg gtaattgcat
     1321 taaacaaagc aattgcttca gcttatgcca taagcatgca atcggctctt gaagctcttc
     1381 acaaaataaa aggcctcgaa aaacactacc tgtactttgc gacgcttggt gaaatgtgtt
     1441 tcggattgaa taaaaaagag gaagcaaaaa attattttac gaaagcactt gggctaacca
     1501 cgtcacggag tgaacggcaa ttgctcaatg aaaagatcat cagttgcaat tgatctggtg
     1561 aatggttgca ggttacaggt ttgcaggtgg caggtttgca gtgtgccggt caccagttgc
     1621 gggttgccgg cgactggcga ccggcgactg actcattact catcactcat cattcatcat
     1681 cacagtttca tctcacccca tcctttcctg tactctcttt ttatgaattg attcgccggt
     1741 tcaaaatttg tgatgcgcat attttcgcca tcccacttat aagcgatata cctgcccggt
     1801 gtttccactt cttccacttc accatatacc ggatcttttc tcttcgattt ttttcgcata
     1861 ttgaaacagc gcaacaataa atttcccatc aacactgttt cggtgagcgg cccggcatag
     1921 ccttcgaagg gagaatctac ttccatattt ccataccctg cgatacatgc atcaatccat
     1981 tgccaccaat gaccatccat gccaccttca atgcgcggat atttctttgg gatattcaca
     2041 tctttattta acgatagcgg caataatttt ggatacgctc cgccccatcc acaagcagct
     2101 tttccttttg ttccgatgaa gatggttccg ccttcaaaac tgttttcctc tttcacgaat
     2161 gccaactcat tgttcatgtt cacatcagga tcaagttcgt ccgggcgatc aggagcgatt
     2221 ccgccatcca tccaatacaa tttaagatcg cggccgtctt tcaatttgaa tgtgtagcga
     2281 agcacgctag acggcggaat gctgtccgga taatctccct cagtgaactt cccggaatac
     2341 acgatcgttg cgctacatgt tacttcggtt ggataaccca attgaaataa tttaaatgaa
     2401 gggccgatga tatgacaagc catgtcgccc aacgcacccg ttccgaattg ccaccatccc
     2461 cgccagttaa aagggaccaa attatcaaca tagtctgtgt actgagccgt gcccaaccaa
     2521 aggtcccatt tcaattcttt gggaacgggc ggatgcacag acggccatgg tattccctgc
     2581 ggccaaacgg gacggtctgt ccaattgtaa acggtatgta tatcgccgag cagcccggcg
     2641 tcaaaccatt cgcgcaatgt gcgcatgcca tcgcatgatg ctccctggtc gcccatctgc
     2701 gtgacgactt tatatttcga tgcagcctgt gtaagaatac gtgcttcaaa aatatcatgc
     2761 gtcaatggtt tttgaagata gagatgcttc ttcatttgca ttgcactcaa cccaactata
     2821 gcatggttgt gatctggtat cgccacagac accgcatcaa aatttttctg ttctttatcg
     2881 aacatctctc tccagtcgtg atagaaaccg gcagccggaa attcttttct tctcggtgca
     2941 gccatgcgct cgtccacatc gcaaaggaac gcgatgaccg cattcttttt tggagcattg
     3001 gcataatgat gaatatcatt ttctccctct cctccgcatc cgacgcacgc gatatataat
     3061 ttatcacttg ggggcacata accccggccg agtacatgcc gcggtacaat gtagaatcct
     3121 gctgttgcca acgctgaatt ttttataaac tcgccgcggg ttaaactttt ttctgacgat
     3181 gtgttctttt ctttttccat gataacgtgt ttagccaaaa aacatttccc cttgatcgat
     3241 attgaaagca agtaataaat tagtcgctct tcaaagtccc cctttaggga gatttagggg
     3301 ctttacagct ccttgatcat tacattccta taccaaagtt ttccattctc ggtgccttgt
     3361 atcgaaatat gtcctttctt gtaagttccg aatcctggcc attccttaaa cttggtattt
     3421 ttgatcatct cccgccaatt tttatcccac aattttgttt tgcttacgac atgtccgttt
     3481 tggatcaggg taagatgtcc gtggttggca attatctcat atgtgttcca ttccggcgcg
     3541 gcattgaccc attcggtgtc gcacggcaca aggtcataca ggtcaccggc tctgcatttt
     3601 aaaatgcggc cgtcatcatt gcaggcgaga tctgcgatct gcatttcagg acctgattca
     3661 taagtgtcct tgaactcgtt tgactcgtgc acatagaaca tcacgccgct gtttgcgcat
     3721 ggttccattt tccattcgag cttcaagtga aaattgtcgt actcattgtc ggtaacgagg
     3781 tcggcgaaat cttcataaac gctgttgcta ttcttgttga gaaatatcat cccgttgtct
     3841 acctgccagg ccttgcccgg cttcgtttgc ttgtaagagt gccagccctg caaatctttt
     3901 ccgttaaaga gtaactgcca gccgtcatct ttttctttag ctgttagtgt gttgttttgt
     3961 ccgctggcaa agttgaaagt gaggcaaccg acgataagaa tggataacgc gatactttta
     4021 ttcattaggt ggtattttat gtgactacat gcagcaatcg aagcaggtgc gataaaatta
     4081 aagaatttca gttacggctg ctgagttcgt tttagaatta cctggattat ttcttcgatt
     4141 cagattcagg cacgtttttt atgcgagaaa tcagttggtt ttattgaccg cttaaagacc
     4201 ttaaaaaaat aattatgcta gccatgaatt accgcgggcc gtatcgcatc cgcgcggacc
     4261 gcaataaacc gtatcctgag attcgtcatc caaatgatgc tatcgttcgc gtaacccgat
     4321 cctgcatctg cggatcagac ctgcacattt atcatggcct cgtgcccgac acgcgtgtgg
     4381 gaatgacttt cggccacgag ttcattggag tggtggaaga gatcggttct tcagttcaaa
     4441 aactcaaagt gggtgatcat gtattggtgc catttaatat tgcatgcggc acctgcccgt
     4501 tttgcaaaca ggaactttat ggcaattgcc atgaatcaaa ttcggaagcc acagcgatcg
     4561 gtggtatttt tgggtactcc cactcggccg gtggttatga tggtggccag gcagaatttg
     4621 tacgcgttcc ttatgcagat gtcggaccca caattattcc ggaagagatg gatatggaag
     4681 acgctgtgct tttaactgac gttgtaccca ctggttacca ggccgcagaa atgggtggca
     4741 taaaaaccgg cgataccgta gtaatttttg gagcaggacc gatcgggatc atggctgcaa
     4801 agtgttcatg gctttttgga gcggggcgcg ttatcgtcat cgatcattta gagtatcgtc
     4861 ttgaattcgt aaaaaattat gcgcaatgtg aagtgtataa ttttaaagag atgggcgacc
     4921 ctgttttgtt ccttaaaaaa gcaacggatt attatggtgc tgatgtttgc atcgatgcag
     4981 taggatgcga ggcgttgggc agcgctctgc aaacgatcac ggggccgaaa ctcatgctac
     5041 aatcaggttc tgcgaccgca ctttggtggg cgatcaattc tgtgaagaaa ggaggaattg
     5101 tttctattgt tggggtgtac ggacctaccg gcaacatcgt gccgatagga aatgtgctta
     5161 acaaagggct cacaattcgt gcgaaccagg catccgtgaa gcggctgttg ccgaggttaa
     5221 tagaacatgt aatggcaggc cgcatcaagc caaaagaaat catcacacat cgcataccgc
     5281 tcgaagatgt ggccgacgca tatcacattt tttcttcaaa gcttgataac tgtattaaac
     5341 cagttctgat accaccactc gcaagagcgt aaaattttta ttatggaaaa cactttggca
     5401 gaaaattata agaatatcaa tggttggggc attgatgctg atcctgagaa tgagcccaca
     5461 tacccgatga aaaaatacaa cggcgctgat catgaacgtt cggattatca aaggcccgaa
     5521 cagcagccgg tcgacgaaga agtactgcac tccaacgagc gcccaactgt gagcgcagtg
     5581 ttcggcactc cgctgccgcc gacaggactg agcggggtaa tacgcaggtt tgcgttccgg
     5641 tttagcgagg gacaactagc gcactggttt cctttaatac ttgcagaccg cgtaaatgtt
     5701 gtagaaggca ttatcgatga tattcggcac ggacagtttc ctaacatctt tgcagagaaa
     5761 ggatggaaag ctgaatggaa atacaaccgt tcaaatgcga taaagaaggt tgctgttggc
     5821 gcgattgtaa cgtcggcgct gatctggtgg atgaccgcaa agaaaaaaaa gaaaaatgtt
     5881 ttttagttgc tgaagtgaag atgttctggt cgtttgaaaa agcttgaagg ataaagtttc
     5941 agcaaccgtg ggcttaaaat cgtaatcgta attttatttg ctttcgatcg tgacagtcgc
     6001 ggttttcagt ccatcggcac ttgctttcaa aattatttcg cctttttcgt ttgtcgattt
     6061 cacaaccacc atacatctgc cttgccacgc ttttcgttgt ggaagctggt agctttctag
     6121 acttaccggg tttgcattgc caacaccagc gatcgtgccg ggtccttcaa ttgtaaaatg
     6181 aatgaggttt tccgatctcg gattccgaac gcccctctca tcaagcaatt caactgttac
     6241 ataactgagg tcttcattgt tcgccttgac ttcagttttg tctacagata attttatttg
     6301 tgatggttgc gccgctgttt tcaaaaccga ttcattcacc tgtttgccac tactgtgacc
     6361 aacagccttt agttcacctg ctgcataacg aacgttgtaa acagccataa attctgtgga
     6421 tcggtttgtt gacttttttc caagcgatgt cccgtttaaa aataattcca cctcatcgca
     6481 tgatgaataa acatttactt caaacgaaga atcttcatga cccggccaat tccaatcagc
     6541 aacaacatcg tcccaattcc agatactcca atcttctttt tttggattga ttggaaaact
     6601 cggttgcggt ggtttcacaa aaattgaaag ctgatctttt ttccaaagtg catcacgata
     6661 gaaggattgt ggacgtttcc atccgcagat atcaatatct ccgcagtagg caagattcca
     6721 tggataaaaa tttttctcct gccaatatcc gcgccatcca atactcgctt caccgatata
     6781 atcaaaacct gtccatacaa aatcgccgat cacccacgga tgatcgatga cgcccatcca
     6841 gtaatcgaac gccttcagtg gaaacgattc ggtagcgacc attattcgtt ctggttttcg
     6901 ctgatgatcg ctttcataat gatcttgcgc ataattgtag ccgcaaatat cgagcgctga
     6961 aaaaaatggg tctttctttt ctgagacgct gttcacagcg gcggttaccg gccgggtatt
     7021 atccagcaaa cgaacataat cagcaagtag cttcgcggtg tctgcaacct ccggcttgtc
     7081 cattccaaca atttcattgc cgatgctcca catgataatg gaaggatgag ttctgtcgcg
     7141 gcacaccatt gccgccaaat cgtgtttcca ctctctatca aaatacaaat gataatcgtt
     7201 gtcatttttt ccttcattcc acatgtcgaa cgcttcatca attaccatca tacctaaact
     7261 atcgcacgca tccagaaatg cgggcgccgg tggattgtgt gaacagcgaa tagcattgaa
     7321 accgctggcc ttcatcaagg ccactcgccg aatttctgct gcatcgaacg atcttgctcc
     7381 cagcggacca ttgtcgatat gaaaacagcc accttttaat tttactggtg ttccattcag
     7441 cataaaaccg tttacggcat caaaagaaat tttgcggatc ccaaattttg tttcaacact
     7501 atcggacaat tttccattga cgtacacttc gcttactaat ttatacaggt ttggatcttc
     7561 tgttgaccac aacgcgggtg atctcagaac agtactgtcg tcaaacacaa actctcctat
     7621 gtaatttact ttctgtttgg ttgaggttgt tgcaacttgt ttgccctgcg gatctatgat
     7681 cttattcaca agtgttacat ttaaggtatt ttcggtttca ttctgcacca gcacccgaac
     7741 atcgatttta gcagatgctt tactcacttg cggtgttgtg ataaaaggcg gcaatgtact
     7801 gacgcaaacg gattcttttt ctatcagcca cacatgacga ttgattccag agccggcata
     7861 ccagcggctg gttgcgcctt cattttttac ctggaccgaa aggacatttt tttgattcca
     7921 tttcatgaag cctgtgatat catagaaaaa aaatgtgtaa ccgtaggcat gatttcggag
     7981 ttggtgtcca ttcagccaca catcagcatt catataaaca ccgtcgaact ggataacgat
     8041 atttttattt ttttctgttg gagacagagt aaatgtcttc cggtaccaac cggttccgcc
     8101 agttgtaaag ccaacactca caccgttcgt agcgtccggg ttaaaaggcg aatttgtgcc
     8161 gggcagatct tcaatgctcc agtcatgagg caggtcaact ttccgccagg cgctatcatc
     8221 aaaatcaatt gcctcggcat ttgccacatc accgcgatga aaacgccagc cttcgtcaaa
     8281 cagaattgtt ctttgagaga aagcgtttat tgttgtgacg agaaataaaa gaagaataaa
     8341 ttttttcatg cggcgtgctt ctgaaagagt aagatagttg aatttttggt ttcaattatt
     8401 tttctcaggc agcatggtcc taaaccagtc aagacctcga acactataga gagagctgaa
     8461 aaaactacct gctctgtgcc tgtgttgtcc ggcactgtta gaataaaatg aaacggagtt
     8521 gtttatcata aaaaaataag tattaatttg acccgtcagc tatggcacga aataaatatg
     8581 tgatcggcgt agactatgga acagattccg tccggtcagt tatcctcgat gctttaaacg
     8641 gtgatgaaat cgcgtcatcg gtcttccatt atcccaggtg gagagacggg ctttattgcg
     8701 aaccccagaa aaatcaattt cggcaacatc cgctcgacta cgttgaaggt cttgtttcga
     8761 ctataaaaga ttgtttaaac aaatcgggac ccacggtaac gaaaaatata aaagccatct
     8821 ctgtcgatac gaccggctca acaccggtcg ccgtcgatga agccggaaca ccgttatcat
     8881 tgttaccgca atttgagaac aatccaaacg ccatgttcgt tttgtggaaa gatcatacgt
     8941 ccacaaaaga agcagcagaa ttgaacgagc atgcggcgaa atttggaatc gactatttgc
     9001 agtatgtcgg cggcatttat tcatccgaat ggttttggag taaactactt catatacttc
     9061 gcattgatga agaagtgcgc agggcgtgtt attcatgggt ggaacattgc gactggattc
     9121 cgtttttgct aacgggcggc aatgatgttt ttaaaatgaa gcgtggtgta tgttctgccg
     9181 gccacaaagc gttatgggct cctgaatatg gaggattacc gcccaatgaa ttttttgcga
     9241 cgctggatag tttgctcgac ggtttcacga aaaggctttt cattgaaaca tatacttcgg
     9301 ccgagcctgc gggaaatctt tccgccgaat gggcagagcg cttaggactg tcaacaaaag
     9361 ttttagttgg tgtgggcgcg ttcgatgcgc acatgggcgc agtaggcgga caaatcgaac
     9421 catatcactt gagtaaagta atgggcacat caacatgcga catgctcata gcgcccgtag
     9481 acgaagtaga aaataaactc attaaaggaa tctgcggcca ggtacgcggc tctatcattc
     9541 ccggcatgat gggaatggaa gccggacaaa gtgctttcgg cgacgtgtat gcctggttta
     9601 gaaatatgat ctcatattct ttaaaaacta ttttacaaac ttcatccgtc atcgactcca
     9661 ctacggcaga tctgcttcaa agagattttc acgagaacat catttctctt cttgcggatg
     9721 aagctgcaaa attaccgatt gaagaaaatg atgagctcgc cattgactgg ctcaacggaa
     9781 gaaggacgcc tgatgcaaac caggctttga aaggagccat ctccgcattg aatttaggaa
     9841 cagatgcgcc acgctttttt agagcgctcg ttgaagcaac atgttttggt gcaaaagcga
     9901 tcgtagatcg gttcaatgag gaaggggttc ctgtaaaagg gctgatcggt ttgggtggag
     9961 tagcgcgaaa atctccttac atcatgcaga caatggccga cgtgatgaac atgtcaatcc
    10021 gcattcatag ttctgagcaa acgtgtgcta caggggcggc gatgttcgct gcaacggtcg
    10081 ccggcattta tcaccgcgtt gaagatgcga tggcagcgat gggaaaagga ttcgacgcgg
    10141 aatatcatcc tgacgtttcg aagaccgaat tgtactcgaa acgttatgag cagtataaac
    10201 gattcggaaa cttaatcgaa agcaacttaa gtgcgcagcg ctaaacaatc tattatgaga
    10261 aaaaagattt tcgtctttag cttttgcata tttgtgtcaa cacatatgtt ttctcaatcc
    10321 tctgttcaaa tgacgataca taccgattcg gcgaatgaaa aaataagcag gtacatctac
    10381 ggacattttg ctgagcacct cggccggtgc atttatgatg gattttggat gtgtgattct
    10441 tctgtcaatc caaaacaata taagttgaga ggggaagtga tcgatgcttt aaaaaagata
    10501 cgtgtgccgg ttttacgctg gccgggtggt tgctttgccg atcagtacca ttgggccgac
    10561 ggcattggcc aatatgacaa acgtccccaa acaatcaaca cgacatgggg catggtgaca
    10621 gaagataata gtttcggtac tcatgaattt ttagggttat gcgattccat aaagtgcgaa
    10681 ccatacatcg caggaaatgt tggaagcggc acgccacaag aaatggcaaa ctggattgag
    10741 tatctcaact tcaacggaaa aagtaccctt gccgatctgc gtcgcgagca cgggcattcg
    10801 gccccttata aagtttcttt ttggggcgtc ggaaacgaga gttggggctg cggcggcgac
    10861 atgacgcctg aattctattc aaatgaatac aagcgttttg cagagttttg taagaattat
    10921 cctggagctc cgctgaaacg tattgcgagc ggcgctaacg gcgacgacta taactggacc
    10981 gaagtgctga tgaaaaatat tcccgcctcg cagatgtggg gaatatcaat gcactattat
    11041 acactggcgg gcagttggca acacaaaggc tcggcaaccg atttcgatga aaagctatac
    11101 ttcaacgctt tgaggaattg tttaagaatg gatgagttgg tcaacaaaca ctccgcgatc
    11161 atggataaat atgacccggg aaaaaaactc gccctggtgg ttgatgagtg gggaatatgg
    11221 acggatgtag aaccgggaac aaatcctgca tttctttatc agcaaaatag tttgcgcgat
    11281 gccctcatcg ctgcgaccac actaaatatt ttcaaccatc attgcgaccg cgttaagatg
    11341 gcgaacctcg cacaaacggt gaatgtattg caatcgctca tcctgacgaa taaagagcat
    11401 gtgctgctta caccgacgta ttatgttttt gatttgtaca aagtgcacca ggatgcgata
    11461 ttgttgccaa tcacttttaa tagtcctgct tatggtctcg gcaatgaaac cattcccgca
    11521 gtaaatgcct ctgcatcgaa agacagcacc ggtgcaattc atgttacatt agtgaacctt
    11581 gacgcgcaaa aaaataattc cgttgatatt tctttgccgg tcggcgcgta taaaaatatt
    11641 gcaggccaaa ttctaacatc aaaaaaattt aatgacgtta atacatttga tcagccggat
    11701 aaagtaaaac tcgcatcgtt cacatcatat aagaaatcgg ccaacggatt atcagttgat
    11761 ctgcccccga tgagtgtagt gctggtaacg ttgaagtgaa gcccgtcccc taacggggac
    11821 ttatgagtcc tgtaaattaa ttgaactact ttgaaaaata ttcgcgtacg attcatcaac
    11881 gtcttaacgt tcgcccttta gggggccgag aatataatga gcaaatacga acacatacaa
    11941 caagccgcat acgacgccaa catgcaactg cccgcgctgg gtttggtatt gtttacgttt
    12001 ggaaatgtaa gtgctgcaga caaagagctt ggtgtgtttg ctattaaacc cagtggcgtt
    12061 ccttattcgg aactctcacc taacaaaatg gtcgttgttg atttcgatgg taaaacggtt
    12121 gcaggaaatt tgagaccatc atctgacacg ctaacgcatg ccgttcttta caaacatttt
    12181 gaaacgatcg gcggcgttgc gcatacgcat tcaacatatg ctacagcctg ggcgcaaagc
    12241 ctgcgcgata ttccgatcta tggcacaacg catgcagatc atctcacctg cgatattccg
    12301 tgtgcagcgc cgatgagtga tgaaatgata gcaggcgatt atgaacatca aacaggattt
    12361 caaataattc atgcgctaaa agaacgaggc ttggatcaca aagaagttga aatgatcctc
    12421 gtaggtaatc atgcgccgtt cacatgggga aaaactgcag acaaagcggt ttacaacagc
    12481 ggtgttttgg aagagatcgc aaagatggcc ttcataacag aaacactaaa agcagattca
    12541 ttgcgattga aagatgcgct cataaaaaaa cattatgaga gaaagcacgg tgcagcaaaa
    12601 tattatggcc aggaaaatga atgaacacaa acatcaaact tcaaacatca agcttcaaat
    12661 actaagtaaa tgatcgatct caaaaaattg gaagtttggt tcataaccgg cagccagcat
    12721 ttatacggcg aagaaacttt gaaacaagtt gccgatcact ctcagcagat cgtaaacggg
    12781 ttgaatgaat caaacgaaat ggctgtcccg gtagttttca aaccggttgt tacaacacct
    12841 gatgagatcc gtgctgtttg ttctgatgct aacgtcgcaa aaaattgcat tggcatcatc
    12901 gcgtggatgc acactttttc tccggcaaaa atgtggatcg gtggtttaaa gatcttgacc
    12961 acgcccttgc ttcatctgca tactcaattc aatcgggaca ttccctgggg cgagatcgac
    13021 atgaacttca tgaacctaaa tcaaagcgca catggcgacc gggaatttgg gtttatcatg
    13081 agtcgtttgc gcatgaatcg caaagtggtc gccgggcact ggaaggatcc ggagattgtg
    13141 cattcgatcg atgtatggat gagagccgct gctgcgtggt attcatggca aggcgcaaaa
    13201 tttgttcgct ttggagacaa catgcgttat gttgcggtta ctgaaggcga caaagtagaa
    13261 gctgaataca aatttggtta tactgtaaac acccacggtg ttggagacct tgtcaaagtg
    13321 atcgaccagg tcagcgattc cgaagtcgat gctttgatca acgaatatga agacggttac
    13381 gagatcgttt cctcattaac aaaaa
//
LOCUS       DASQJI010000730         6862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2716432,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000730 DASQJI010000000
VERSION     DASQJI010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6862
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2716432"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1148
                     /locus_tag="VEV83_19435"
     CDS             <1..1148
                     /locus_tag="VEV83_19435"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47363.1"
                     /translation="SSINNISNLEAGTYKIILTAGNGCSTDSTVILTEPPTLLASANT
                     DPILCSGGTTNLIATATGGTGNYHYALSNSANNVTGPQDDNQFVVSSGTYVLSVTDDN
                     GCSFATDTIQIDEPPALTATASADIISCNGGTTTLTVTPQGGTGNYHYALSDGTGAQV
                     DNHFTVAAGNYTVTVTDDNGCSFTTDTLRVTEPQALTASASANPILCIGGTTILTVTA
                     QGGTGNYHYTLSDSANNTTGPQDDNHFTVTAGSYTATVTDDNGCLFTAESIKVNDGTN
                     GCGGMVAVNSNQSRSGNITAKNNSGLNASIYPNPSSTAFTLRIQSNDNANVKITIVDV
                     YGRKAYEAEGRGHDTFLFGAEFVPGTYLIKVMQGKNIKILKVIKQSD"
     gene            1207..1467
                     /locus_tag="VEV83_19440"
     CDS             1207..1467
                     /locus_tag="VEV83_19440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47364.1"
                     /translation="MSPSTNAENLLKLNNDNELDFLVIHERGITYEVPAPFIASLKNS
                     YARYPSVNSWYDSLDAEKKQIVSRRDLINEIFPINDAGFMVQ"
     gene            complement(1541..3157)
                     /locus_tag="VEV83_19445"
     CDS             complement(1541..3157)
                     /locus_tag="VEV83_19445"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HYK47365.1"
                     /translation="MKAFASLVTKLGSSTSSNEKLDALANYFSLADEKDRVWVVALFS
                     GRRPRRLINSSLLPQWCIEVTGIPSWLFGECYGAVGDLAETIALLLPDGEEHEAHLPL
                     SFYIEKLVSLEKENEFVKREFITGCWSSMNREERFVFNKLLTGNFRIGVSQKLMVNAL
                     AKTVQLEPSVIAHRISGNWDPVTTTFSELLTSDATNIDHSKPYPFYLAYALEENPETL
                     GEPNEWQAEWKWDGIRGEIIRRNNQLYVWSRGEELMTEKFPEYAMLQHKLPDGVALDG
                     EIISMTNTNASTNDFQILPFALLQTRIGRKNVTKKQLTESPIGFIAYDLLEYEYEDWR
                     TRPLEERRAQLEKIIVDAHEAVLRISPVIDFMTWDELAEVRERSRSINAEGIMLKRRS
                     SIYQVGRRVGDWWKWKIDPLTIDAVMIYAQKGSGRRSNLYTDYTFAVRDGDNLVSFTK
                     AYSGLSDKEFAQVDSFVKRNSLEKFGPVRTVKPELVFEIAFEGIAASNRHKSGVALRF
                     PRIKRWRRDKKPDEINTLDDLKKMLALYGK"
     gene            complement(3154..4200)
                     /locus_tag="VEV83_19450"
     CDS             complement(3154..4200)
                     /locus_tag="VEV83_19450"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HYK47366.1"
                     /translation="MQLIEFTEKGLFCRAGNFYVDPWKPVERAVITHAHSDHARWGSK
                     FYLCHTDSKPLLRARLGENFYDTLGWNEARYFNGIKVSLHPAGHMIGSSQVRIEHQNE
                     VWVVSGDYKVENDGLSGAFEPIRCNVFITESTFGLPIYCWKKQQKLFDEMREWILANK
                     ALNKTSVLIAYSLGKAQRILRALEDFDEPVYMHGATYNMHQSLLNYGFPLPPVKAERI
                     TFETPKEKLRNAIVIAPPGAESSPWMKRFFPYAVGVCSGWMQVRGNVRRRNVDGGFAL
                     SDHADWNGLLCAVKETGAEKVFVTHGFQSVFSRYLNEIGIWSAEVKTEYGDEVEEEAS
                     TISANGEELNSNGA"
     gene            complement(4288..5619)
                     /gene="purB"
                     /locus_tag="VEV83_19455"
     CDS             complement(4288..5619)
                     /gene="purB"
                     /locus_tag="VEV83_19455"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HYK47367.1"
                     /translation="MELNTLTAISPVDGRYRKQVAHLDEYFSEYALIKYRVFVEIKYF
                     LFLAEKKIFRLPEKLRQHLLGISENFSLNDAEQIKQIEAITNHDVKAVEYFLKQELDR
                     AAASKEKEWIHFGLTSQDINNTAIPLTWKNYVEYEYLPAVLNLQKKLNELAQRWKDVP
                     MLAHTHGQPASPTRLGKEFLVYVERLDNQVKLFSYIPYAAKFGGATGNLNAHQVAFPK
                     TDWVTFANQFIEGLGLQRLQYTTQIEHYDYMCAHFDAIKRINNILMDLCRDIWMYISL
                     EYFKQKIKKDEVGSSAMPHKVNPIDFENAEGNLGVANALLEHFSAKLPISRLQRDLTD
                     STVLRNLGVPMAHTMISLRSIEKGLKKIVLNESKLREDLENNWAVVAEAIQTILRREN
                     YLNPYEALKELTRVNGKIDKKAIHEFIDNLDVSSAVKKEMKKITPHNYTGI"
     gene            5756..6499
                     /locus_tag="VEV83_19460"
     CDS             5756..6499
                     /locus_tag="VEV83_19460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HYK47368.1"
                     /translation="MKKIKVGAVSYLNTKPLLFGIENSPDLLQQIELTKDYPSKIASQ
                     LLEGTLDVGLVPVAIIPKMKEYFIVSDFCIGAEGDVASVCLFSDVELDRVEKILLDYQ
                     SRTSSALCKVLLKHHWKKNIPTENSENELSDHFGGAVAGVLIGDRALRRRQISKYIYD
                     LAGAWKEMSGLPFVFAAWIANKPLPADFVHMFNEKNGEGVSNIEAVLKTTSCPYYDLK
                     KYYTKNISYRLNAKKIEGMNLFLDLMQQL"
     gene            6534..>6862
                     /locus_tag="VEV83_19465"
     CDS             6534..>6862
                     /locus_tag="VEV83_19465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47369.1"
                     /translation="MWWNKLFTLAAIFYGGTAFAQRTEIPDSLRQHVFVAGYHSGFIF
                     AHSIHVQNTKGTKPDGFELEYSHLRTDSASRAHYSCYARSGFDFTFTNFNKQLLGQSY
                     SVSYFIEP"
BASE COUNT         1840 a         1601 c         1429 g         1992 t
ORIGIN      
        1 cttcatcaat caataatatc agcaatctcg aagccggaac ctataaaatc attctgacgg
       61 cgggcaatgg atgttcaact gacagcacgg ttatcttaac cgaaccgcca accctgttgg
      121 catcagcaaa tactgatccc atcctatgca gtggtggcac gaccaatttg attgccactg
      181 ccaccggggg caccggtaac tatcactatg cattatcaaa ttctgcaaac aacgtcactg
      241 gaccacaaga tgacaaccag tttgtagttt cttcggggac ttatgtgctt tccgtaacgg
      301 atgacaacgg atgctcattc gcaacagata ctatacaaat tgatgaacca ccagctttga
      361 cagcaacagc aagcgctgat atcatcagtt gcaatggggg cacaacaacg ctgacagtaa
      421 caccgcaggg tggcacaggt aattatcatt atgctttgtc cgatggcaca ggtgcacaag
      481 ttgataatca ttttacagtg gcagccggaa attataccgt aactgtaacc gatgataatg
      541 gttgctcatt cacaactgat acattgcggg ttactgaacc gcaagcctta accgcaagcg
      601 ccagtgccaa tccgattcta tgcatagggg gaacgaccat cttaactgta acagcgcagg
      661 gtggcacagg aaattatcat tacaccttat cggattcagc taataatacc accggccccc
      721 aggatgataa tcattttacg gttacggcag gaagttatac cgcaacggta accgatgata
      781 acggctgttt atttacggcg gaatccataa aggttaacga tggtacgaat ggatgtggag
      841 ggatggtggc ggtaaatagc aaccaaagca gaagcggcaa catcacggca aaaaataatt
      901 ccggacttaa tgcgagtata tatccgaatc cttcctcaac tgcattcact ctgcggattc
      961 agagcaatga taacgcaaat gtgaaaataa caatcgtgga tgtttatgga agaaaagctt
     1021 acgaggcgga aggacgcgga cacgatacat ttttatttgg tgccgaattt gtaccgggaa
     1081 catatttgat aaaagtgatg cagggaaaaa atattaaaat acttaaggtg ataaaacaaa
     1141 gcgactagtt tattcatggt ctcacgcatt tgctcttaac attagcaaca caaaagttga
     1201 aactatatga gcccttccac aaatgcagaa aatctgctta agctcaataa tgataatgag
     1261 cttgatttct tggtcataca tgagagagga attacttatg aagtgcctgc tccttttata
     1321 gcgagtttaa aaaattctta cgcgcgatac ccgtcagtaa atagctggta cgatagttta
     1381 gatgcagaaa agaagcaaat tgtatcacgt cgcgacctga taaatgaaat tttccctatc
     1441 aatgacgccg ggtttatggt gcaatagaat tgaaatatta tcgcctggtt ttttagaaat
     1501 actgtgtggg gttttgcagc acaccttaac attgattgtt tcattttcca tacaaggcca
     1561 gcattttttt taagtcatca agggtattta tttcgtccgg cttcttatcg cgccgccagc
     1621 gtttgattct tggaaaccga agtgctacac cactcttgtg ccggttactc gcagcaatcc
     1681 cttcgaacgc gatctcaaaa acgagctccg gctttacggt gcgaaccggc ccaaactttt
     1741 ccagtgaatt tctttttacg aatgaatcga cctgcgcaaa ttctttatca gataaccctg
     1801 aatatgcttt tgtaaaactc acaaggttat caccatctct taccgcaaac gtgtaatcgg
     1861 tgtacaggtt actccttcta ccgctgcctt tttgtgcata gatcattacg gcgtcgatgg
     1921 tcaacggatc gatcttccac ttccaccagt cgcctacgcg gcgccccacc tggtagatcg
     1981 aagatcttct tttcaacata atcccttccg cattaatgct gcggctgcgt tcgcgaacct
     2041 ctgccagctc atcccacgtc atgaaatcga tcaccggcga aattctaaga acagcttcat
     2101 gagcgtccac aattattttt tcaagttgtg ctcttctttc ctcgagtggc ctcgtacgcc
     2161 aatcttcata ttcgtattcc aataaatcat acgctataaa gccaattggc gattcagtta
     2221 attgtttttt cgtgacgttc tttcttccta tcctggtttg cagcagcgcg aatggcaata
     2281 tctggaaatc atttgtggac gcgtttgtgt tcgtcataga aatgatttca ccgtccaatg
     2341 ctacaccatc aggtaattta tgttgaagca tggcgtattc aggaaatttt tctgtcatca
     2401 attcctcgcc gcggctccat acataaagct ggttattgcg cctgatgatt tcaccacgaa
     2461 tgccgtccca tttccattcc gcctgccatt cgttcggctc tcccaacgtt tcggggtttt
     2521 cttccaaagc ataagcgagg taaaaaggat atggcttcga gtgatctata ttcgttgcat
     2581 ctgaagttag gagctcgctg aatgtggtag tcaccggatc ccagtttccg cttatgcgat
     2641 gcgcgatcac cgatggttca agctgtactg tttttgcaag agcattcacc atcagctttt
     2701 gagaaacgcc gatcctgaaa tttcccgtaa gcagcttatt aaaaacaaaa cgttcttccc
     2761 tgttcatgct actccagcag cccgtaataa attctctctt tacaaactcg ttttcctttt
     2821 caagcgaaac cagtttttcg atataaaaag acaaaggcaa gtgcgcttca tgttcctctc
     2881 catcgggtaa aaggagtgcg atcgtttcgg cgaggtctcc tactgcgccg taacactctc
     2941 cgaataacca tgaaggaatt ccggtgactt cgatgcacca ctgtggcaac aacgacgaat
     3001 tgatcaggcg ccttggtctt ctgccactga ataaagcgac tacccaaaca cggtcttttt
     3061 catcagcaag tgaaaaataa tttgcgagcg catcaagctt ttcatttgaa cttgtgctgc
     3121 tgccgagttt tgttacgagt gatgcgaatg ccttcatgcg ccgtttgagt ttagctcttc
     3181 cccgttagca gaaatcgttg aagcttcttc ctcaacttca tcaccatact cagtttttac
     3241 ttctgcgctc caaatcccga tctcatttaa atacctgcta aacactgact gaaagccatg
     3301 tgtcacaaaa accttttcgg ctccggtttc tttcactgcg cataacaaac cattccagtc
     3361 agcgtgatcg ctcagcgcaa aaccgccgtc aacatttctt cttcttacgt tgccgcgcac
     3421 ctgcatccag ccgctgcaaa caccaaccgc gtatggaaaa aatcttttca tccatgggga
     3481 actctcggcg cccggcggcg cgatcactat tgcgtttcgt aatttttcct ttggcgtttc
     3541 aaaggttatt cgttcggctt tgacaggagg aagcgggaat ccgtaattca gcagcgactg
     3601 atgcatatta tatgtggcgc cgtgcatgta gaccggctca tcaaaatctt ccagcgctct
     3661 taatattcgt tgtgctttgc caaggctata agcaatgagc acgctcgttt tgttcaatgc
     3721 tttgtttgca aggatccact ccctcatctc atcgaacaat ttctgctgct ttttccagca
     3781 ataaatgggt aagccaaaag ttgattctgt aatgaacacg ttgcaacgga tcggttcaaa
     3841 cgcgccgctg aggccgtcat tctctacttt gtagtctccg ctcactaccc aaacttcatt
     3901 ttggtgttcg atgcgaacct gggacgagcc gatcatatgc cccgcagggt ggagggaaac
     3961 ttttatgcca ttgaaatatc ttgcttcgtt ccatccgagt gtgtcataaa aattttctcc
     4021 gagcctggcg cgcagcaatg gtttagaatc tgtgtggcac agataaaatt tactgcccca
     4081 tctcgcgtgg tcgctatgtg cgtgtgtgat cacagctctt tcaaccggct tccacggatc
     4141 aacatagaaa tttcctgcgc gacaaaacaa tcctttttcc gtaaactcga tcaactgcat
     4201 acgcttttca tgtaatcaaa aatatttcca gttttatacg aagtaagaaa taagggaagg
     4261 aaaagtacgg acaaccaggt gtctgtatta aattccggtg taattatgcg gtgttatttt
     4321 cttcatctct tttttaacag cagatgaaac atcaagatta tcgataaact cgtggatcgc
     4381 tttcttatcg atctttccgt tcacgcgtgt gagttctttg agcgcttcat aggggttcag
     4441 gtaattctcc cgccgtaaaa ttgtttgaat ggcctccgcg acgactgccc agttattttc
     4501 gaggtcttcg cgcaacttgc tttcatttaa tacaattttc ttcaggcctt tttcaataga
     4561 acgcaacgag atcattgtat gcgccatggg tacacctaaa tttctgagta ccgtagagtc
     4621 tgtaagatct ctttgtagtc tgctgatcgg aagctttgca gaaaaatgtt ccagcagcgc
     4681 attagccaca ccaaggtttc cctcggcatt ttcaaagtcg atggggttca ccttatgtgg
     4741 catggcagaa gaacccacct cgtccttttt aattttttgt ttgaaatact cgaggctgat
     4801 gtacatccag atgtcgcgac acagatccat caaaatattg ttgatacgtt tgatggcatc
     4861 gaaatgagca cacatgtaat cataatgttc aatctgcgtt gtgtactgaa gtcgctgcag
     4921 gcccagacct tcgataaatt ggttggcgaa tgtgacccag tcggtttttg gaaaagccac
     4981 ctggtgtgca ttaaggttac ctgtggcgcc accaaatttt gccgcgtacg gaatatatga
     5041 aaagagtttc acctggttat cgagccgttc cacgtatacc aggaattctt ttcccagcct
     5101 ggtcggcgac gcaggttgac catgtgtatg ggccaacatc ggaacatctt tccaacgctg
     5161 cgcaagctca ttcaatttct tttgaagatt caacaccgcg ggcaaatatt catactcaac
     5221 ataatttttc caagtaagtg ggatggcagt attgttgata tcctgcgacg ttaatccaaa
     5281 atggatccat tccttttcct tcgatgcagc agccctgtcc aactcctgtt ttagaaaata
     5341 ttcaactgct ttcacgtcgt gattagtgat cgcttctatt tgcttgatct gttcagcatc
     5401 attcaaacta aagttttccg aaattcccaa aaggtgctgc ctgagttttt ccggcaacct
     5461 gaatattttt ttttctgcca ggaatagaaa atattttatc tcaacgaaaa cgcggtattt
     5521 tatcagcgcg tattccgaaa aatattcatc gaggtgcgcc acctgcttgc ggtaccgtcc
     5581 gtcaaccggg gaaatagctg taagagtatt taattccacg ctgctggtta attggtttat
     5641 tagttaatta gtttatccgg tacttagttt tatggcggat cttactcatc attgattact
     5701 cattcctcat ttaaccatta ttctctttct ttgcacgcaa aattaattta aacaattgaa
     5761 gaagatcaaa gttggagcag ttagttacct caatacaaaa cccttgttat tcggcattga
     5821 aaattcaccc gaccttttgc agcagattga gcttacaaag gattacccat caaagatcgc
     5881 ttcgcagttg ctcgaaggca ctttggacgt tggcctcgta ccggttgcga tcattccaaa
     5941 aatgaaggaa tattttatag tctcggattt ctgcattggt gctgaaggag acgttgcctc
     6001 cgtgtgcctt ttcagtgacg tggagttaga ccgcgtagaa aaaattttgc tcgattacca
     6061 gagcaggacg tcaagtgcgc tatgcaaggt tttactaaag catcattgga aaaaaaatat
     6121 tccgaccgaa aactcggaga atgaacttag tgatcatttt ggcggagcag ttgcaggagt
     6181 tctcatcggc gatcgtgctc tgcggcggcg ccaaatctca aaatacattt atgatctcgc
     6241 gggcgcctgg aaagagatga gcggcttacc gttcgtcttc gccgcatgga tcgctaataa
     6301 accattgccc gcggatttcg tgcacatgtt caacgagaaa aatggagaag gggtgagcaa
     6361 tatcgaggct gttttaaaaa caacgagctg cccgtactat gatctgaaaa aatattacac
     6421 caaaaacatt tcgtaccgcc tcaatgctaa aaagatcgaa ggcatgaatt tgttccttga
     6481 tctgatgcag caactctaac tacgtttttt ctatttttgg agagaagaac agtatgtggt
     6541 ggaataagct tttcacgtta gcggcgatat tttacggtgg tactgcgttt gctcaaagaa
     6601 ctgaaattcc cgacagcctg cgccagcatg tttttgttgc aggatatcat tcgggattca
     6661 tttttgcgca cagcattcat gttcaaaaca caaaaggtac taaacccgac ggtttcgaac
     6721 tggagtactc ccatttaaga acagactccg catcacgcgc tcactatagc tgctatgcgc
     6781 gttccggttt tgatttcacg tttaccaatt tcaacaaaca actgcttgga caatcttatt
     6841 cagtttccta ttttattgaa cc
//
LOCUS       DASQJI010000731         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2102598,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000731 DASQJI010000000
VERSION     DASQJI010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2102598"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VEV83_19470"
     CDS             <1..540
                     /locus_tag="VEV83_19470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47370.1"
                     /translation="KNKSAVDTFASGLDQPSDIKWDGKENFYVSEYEKGTIKKINMKG
                     QLSVFVSGLKKPFGLALDNDGNLYVASNATGEIDKIDPDGKLHFLGQIPGAASYIDID
                     ENSGKLYAPCFTCHKIFVIDKNGKTELLTGNYAGYKDGNLTTAQFNGPNSIVISANSD
                     IYISEFEANRIRKITGIKN"
     gene            623..1366
                     /locus_tag="VEV83_19475"
     CDS             623..1366
                     /locus_tag="VEV83_19475"
                     /inference="COORDINATES: protein motif:HMM:NF013356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HYK47371.1"
                     /translation="MQLQIFKDYQTLSDSVASEIIELVKKQPNAVLCLASGHTPVLTY
                     SIMAERAISEKIDFTQCIFVGLDEWMGIPPDVEGSCHFFLQKNIFGPLHISSSQYHVF
                     DALAADAEKECEKMDKVISEKGGIDLMLLGVGMNGHIGFNEPGVSFDNHSHLVQLDDT
                     TRSVGQKYFANQTALGKGLTLGVTTVMETKKVILMANGVKKAEVMKNVLEGPISNEVP
                     ASIIRTHHNALVMIDDEAASMLQHADLSR"
     gene            1403..>1596
                     /locus_tag="VEV83_19480"
     CDS             1403..>1596
                     /locus_tag="VEV83_19480"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HYK47372.1"
                     /translation="MKKLITVLLSAFCVCQLQAQKEITLSKDALKDKIMGGWAGQTIG
                     VTFGGPYEFRFQGTFIQDYQP"
BASE COUNT          493 a          314 c          366 g          423 t
ORIGIN      
        1 aaaaataaga gcgcggttga tacgtttgcc agcggattgg atcaaccttc agatataaaa
       61 tgggatggga aagaaaattt ttatgtttcg gaatatgaaa aaggaactat caaaaagatc
      121 aacatgaaag gacagttgag cgtctttgta agtggactta aaaagccttt tggactcgcg
      181 cttgacaatg atggtaattt atatgtggcc agcaatgcga ccggtgagat cgataagatt
      241 gatcctgatg gaaaacttca ttttctcgga cagataccag gtgctgcttc ctatattgac
      301 attgacgaaa acagcggaaa attgtatgcg ccgtgtttca cttgtcataa gatctttgtg
      361 atcgataaaa atggtaaaac ggaattgttg actggaaact atgccggcta taaagatgga
      421 aatttaacca ccgctcagtt caacggcccg aacagtatag tgatctcagc caacagcgat
      481 atttatattt ctgaatttga agcgaaccgc atacgcaaaa taacgggaat taaaaattga
      541 tataaaacaa gctccgggtt tatcctactt gcaatcctgg ctactgttag ctatataaaa
      601 aagatatgct tattttagat tcatgcaatt acaaattttc aaagactatc aaacgctgtc
      661 ggattccgtt gcgtccgaaa ttattgaact cgtaaagaaa cagccgaacg ctgttctttg
      721 cctcgcctca ggacatacgc cggtccttac ctattcgatc atggctgaga gagccatatc
      781 cgaaaagatc gattttacgc aatgcatttt tgtcggcctt gatgagtgga tgggcatccc
      841 gccggatgtg gaaggcagtt gccatttctt cctgcagaaa aatattttcg gcccgttgca
      901 catttcctct tcgcaatatc atgtcttcga tgcattagcc gcggatgcgg aaaaagagtg
      961 tgagaaaatg gataaggtaa tttctgaaaa gggcggcatc gatctcatgt tactcggcgt
     1021 gggaatgaac gggcatattg gatttaatga accgggcgtg tctttcgaca atcactcgca
     1081 tcttgttcaa ttggatgata ccacccgatc agtcggacaa aaatatttcg ccaatcaaac
     1141 cgcgctcgga aagggattga cgctcggcgt aacgactgtg atggaaacaa agaaagtgat
     1201 ccttatggca aacggtgtaa agaaagccga agtaatgaag aacgttctcg aaggacccat
     1261 cagcaacgaa gttcccgcaa gcataatcag aacgcatcat aatgctcttg ttatgatcga
     1321 tgacgaagca gcatctatgt tgcagcatgc ggatctaagc aggtaaatta gcgcagcaga
     1381 tatttattga atgccttccg atatgaaaaa gctcatcaca gttttattat ccgcattttg
     1441 cgtttgtcaa ctgcaagcgc agaaagaaat caccttaagt aaagacgcat tgaaagataa
     1501 gataatgggc ggatgggcgg gccaaacgat cggtgttacg tttggtggcc catatgaatt
     1561 tcgtttccag ggaactttta tccaggatta ccagcc
//
LOCUS       DASQJI010000732         4113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2256310,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000732 DASQJI010000000
VERSION     DASQJI010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2256310"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..404)
                     /locus_tag="VEV83_19485"
     CDS             complement(237..404)
                     /locus_tag="VEV83_19485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HYK47373.1"
                     /translation="MKTQFNSIIFLALLLFMLSGCQVVGDIFKAGVWVGILAVVGVIV
                     LIFWLIGRARK"
     gene            674..3685
                     /locus_tag="VEV83_19490"
     CDS             674..3685
                     /locus_tag="VEV83_19490"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK47374.1"
                     /translation="MKRTPLHKLVITLVLASLLTSVNFSVANAQSGKPNIILILADDI
                     SYGSLTCNGGNLYSTPNLDSMAQRGMRFTECHATPYCSPSRFQFLTGKYNFRNYVNWG
                     DMDTAQRTIGNLMRDAGYKTACYGKWQFGGGDASVHALGFDNYCLYNAFDGGEKGDRY
                     KSPTIYTNGDFVSSKRTENKYSEDIFADSVINFIDRNKSVPFFIYYPMALVHGPFQPT
                     PDDTAFANWNPEESDESFYPSMVAYMDKKIGEIIAHLKEIGLDKNTVVIYSGDNGSSK
                     SVGIYRAGDSTVYGGKSITTEAGTRVPLIVFWDGKVIPGTVNNDLIDFTDVLPTVADI
                     AHIPVPASYGPIDGISFAPRLTGNAGTPRDWIFYHYDPHPGYNTYKRWAQTATYKLYD
                     TSSYNSQRLFYNIANDPDERFPIPDSLLSGDEAQLKQNFLGVFTNYIQQGFALFEPPV
                     AFTTTDSSTLVHDTIDIDGGSGITARGVVWSENHNPTLSSGNYTLDGTGNGIFGTVIP
                     GLKSNTTYYVRTYATNIPGTAYSKETSFTTARAFPVATAATAISENSFTANWDQLTGA
                     TGYMLDVSKSPTFSTNIASNLTEGFDSGNQTEHWFINPEIRNDSVLYGVAPPSLRLRS
                     DGVRVISDLLAGPATQLRFWIKGSGPGAGSLLVEGFNGLNWVVVDNIVDPPYGHGFLK
                     TYGFRTTPSLDSNFIKFRFTFHQAAGAINLDDVSINYNVASPSFLPGYHQKPVTGTSA
                     QVTVVLPQMYYYRVTALYDTVPTGYSNVIAVRACSKAVINNVLATNLTCNNDGSGAIS
                     LDVTGNNLVYHWSGVNGFTSTRKDIEKLSAGDYSLIINSNGGCPIDTSVTLTEPPILQ
                     ASATAGEIAQVGGTAMVTITANGGTPAYAGTGDFSQSAGTTKYVVTDAHGCKASVSVS
                     LTNPAPAGILLFPNPTLATVKMIFPLKESGQCTIKITDVTGKVLLSSQLDGLAGGNVT
                     ELDLRGFAPGTYMVSLVTNDERKTIKLIKAQ"
     gene            complement(3761..>4113)
                     /locus_tag="VEV83_19495"
     CDS             complement(3761..>4113)
                     /locus_tag="VEV83_19495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HYK47375.1"
                     /translation="LRDGLLSGETELIKLNDKRLPLRVALFYKDAIVLKHINSKEISL
                     RTAKDPHGLTFKFHGFPYFGIWAAKDAPFVCLEPWCGIADNIHHDNQLTHKEGIIELQ
                     PGVSWQRTWSVDVF"
BASE COUNT         1151 a          933 c          961 g         1068 t
ORIGIN      
        1 aaagctcaaa tttctgcgag tacgcctgtg atatggccaa cgtaatggcg agaagtgcaa
       61 taattttttt cattctgtat ccctgacaag cggtttggaa gatacagcga atattgaatt
      121 acggcctttg tcttttgttg aaaataaaaa accacatacc ggatgccgcg caggcgaatc
      181 taaaacgact agagtgcaaa tcgtttctgg ggagaactgg cttgttcagc ggtcttttat
      241 tttctggctc taccgattaa ccagaagata aggacaataa cgccaacgac agccagaatg
      301 cctacccaaa cacctgcctt aaagatatct ccaaccacct ggcagcccga cagcatgaat
      361 agaagcaggg caagaaagat gatggagttg aattgtgttt tcataacaga ccattttact
      421 ctagtaaatt aaaatccgtg ccaaaagcgg ccgtttcatc tgtccggctt gcctgtttca
      481 ataaagaacc gcaattatta accgtaaacg ccgtcagccg cgagtcatga aaaaaatttc
      541 agaaaaaatc aactgtcaat tccttttttc taaatttgat tcgataatct gttgccggaa
      601 gaccctgaag agaagtttac agcgtttaac ctctgataaa aaacttgttt ccccgaaagc
      661 taacctctaa catatgaagc gaacaccttt acacaagctt gtaattactt tagtactggc
      721 cagtctcctc acatcggtga atttcagcgt tgctaacgcg cagtctggaa aaccgaacat
      781 tattttgatc cttgcagatg atattagtta cggctcactg acatgcaacg gcggcaatct
      841 gtattcaact cccaatctcg attcaatggc gcaacgcggc atgcggttta ctgaatgtca
      901 cgcaactcca tactgctcgc cgtcccgctt tcagttcctt acaggaaaat ataatttccg
      961 gaactacgtc aactggggtg acatggatac agctcaaaga acaattggca atttgatgcg
     1021 ggatgcgggg tacaaaacgg cttgctatgg aaaatggcaa tttggtggag gcgatgcatc
     1081 tgtgcacgcg ctcggtttcg acaactattg cctgtataat gcttttgacg ggggtgaaaa
     1141 gggtgaccgg tataaaagtc caaccatcta caccaatggc gattttgtga gcagtaaacg
     1201 cacggaaaat aaatacagcg aagatatttt cgccgattca gtgataaatt ttatcgaccg
     1261 aaacaagtct gttccatttt ttatttatta tccgatggcg ttggtgcacg gcccgttcca
     1321 gcctactccc gacgacactg cattcgccaa ctggaatccg gaagaatcgg atgagtcttt
     1381 ctacccttcg atggtggcat atatggataa gaaaattgga gagatcattg cacacctcaa
     1441 agaaatcggg ctcgacaaaa ataccgtggt gatctactca ggcgataacg gcagctcgaa
     1501 atcggtaggc atttatcggg ctggagactc aacggtatac gggggaaaaa gtataacgac
     1561 agaagccgga acacgggtgc ccctcatcgt tttctgggat ggcaaagtaa ttccgggaac
     1621 tgtaaataac gaccttatag attttacaga tgtcttaccg acagttgcag acatcgccca
     1681 tataccggtg cctgcttcgt acggtccgat agacgggata agttttgcgc cgagacttac
     1741 aggcaatgcg ggaacaccgc gtgactggat attttatcat tatgatccgc acccgggcta
     1801 taacacctac aagcgatggg cacaaactgc aacctataaa ttatatgaca cgtcttctta
     1861 caattcgcaa cggctttttt ataacatcgc aaatgatccg gatgaaagat ttccgattcc
     1921 agatagtttg cttagtggag acgaagctca attgaaacaa aattttttgg gtgtctttac
     1981 taattacatt cagcaaggat ttgcattgtt tgaacctccg gttgctttta caacaacaga
     2041 ttcatctacg cttgtgcacg ataccatcga cattgatggc gggtcaggta taactgcacg
     2101 aggtgttgta tggagtgaaa atcataaccc cactttatcc agtggaaatt atacattgga
     2161 tggaaccggc aacggcatct ttgggactgt aatacctggc ctgaaaagca acacaacata
     2221 ttatgtaagg acttatgcaa ccaatattcc cggcacagct tatagtaaag aaaccagttt
     2281 tacaactgcg cgcgcatttc cggttgccac cgccgcgacg gccatttcgg aaaatagctt
     2341 taccgcaaat tgggaccagt taaccggcgc cacaggctac atgctcgacg tgagtaaatc
     2401 tccaactttc agcacaaaca ttgccagcaa tctcaccgag ggttttgaca gtggtaacca
     2461 gaccgaacat tggttcatca atcctgagat aagaaacgat tcggtcctgt acggagttgc
     2521 gccgccctca ttgcgccttc gaagcgatgg tgtaagagtt atcagtgatc tgttggcggg
     2581 gcccgcgacc caactccggt tctggataaa aggatccggc ccgggtgcgg gttcgctatt
     2641 ggttgaagga tttaatggtc tgaattgggt ggtcgtggat aatattgttg atccccctta
     2701 tgggcacggt tttttgaaaa cttatggctt ccgcaccaca ccatctctcg acagcaattt
     2761 tattaagttc agatttacat ttcaccaggc tgccggcgca attaatcttg atgatgtttc
     2821 aatcaattat aatgttgcga gcccgtcgtt tttaccgggc taccatcaaa agccggtgac
     2881 gggaacctca gcccaggtga cagttgtatt accacagatg tattattacc gcgtaactgc
     2941 gttgtacgac acggtgccga ccggctactc gaatgtgatc gcggttcgtg catgttcaaa
     3001 ggccgtgatc aacaatgtgc ttgcaactaa cttaacatgc aacaacgatg gctcaggggc
     3061 tattagctta gatgtaacgg ggaataacct ggtatatcat tggagcggtg tgaatggctt
     3121 cacgtcgacg aggaaagata tcgaaaaact ttccgcaggt gattattcgt tgatcattaa
     3181 ctctaatgga ggttgcccga tcgacacaag cgttacgtta actgagcccc cgatactgca
     3241 ggcatcagct actgcaggcg agatcgcgca ggttggcggt acggctatgg tgacaataac
     3301 agcaaacggt ggaacaccgg cttatgccgg cactggtgat tttagccagt ctgccggaac
     3361 caccaagtat gttgttactg atgcgcatgg gtgcaaagcc tcagtgagcg tcagtttgac
     3421 gaatccggca ccagccggta tattgctatt tccgaatcct actttagcca ccgtgaaaat
     3481 gatctttcca cttaaagagt cgggacagtg tacgatcaag atcaccgacg ttacagggaa
     3541 agtattgttg agtagccaac tggacggact ggctggaggc aacgtaacgg agctggacct
     3601 gcggggcttt gcacctggta cgtacatggt gagcttagtc actaatgacg aaaggaaaac
     3661 gatcaagcta ataaaagctc agtaagcgtt gacggaatat tttttgaaaa caaaatcttc
     3721 gcgtgagttg gtttcaataa ttaaattgaa aacacgcttt tcaaaaaacg tcaacgctcc
     3781 acgttcgttg ccaggaaacg ccgggttgca actcaataat gccttcttta tgggtgagtt
     3841 gattgtcgtg gtgaatattg tccgcgatgc cgcaccacgg ttcgaggcaa acgaatgggg
     3901 catccttcgc tgcccaaatt ccgaaatatg ggaagccatg aaatttgaat gttaagccat
     3961 gcggatcctt agctgttcgc agcgaaattt ctttactgtt tatgtgcttg agcacgatcg
     4021 catctttata aaacaaggcc actcgaagtg gcaagcgttt atcgttcagt tttataagtt
     4081 ctgtttcgcc tgacagcaag ccgtcacgca gca
//
LOCUS       DASQJI010000733         7976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1331473,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000733 DASQJI010000000
VERSION     DASQJI010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7976
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331473"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VEV83_19500"
     CDS             <1..817
                     /locus_tag="VEV83_19500"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK47376.1"
                     /translation="SIAAAQERVDIIKQQINVGFANNADLFQSQLDLNALIEAKQLQQ
                     LTTAQAKTSLLTSLTLKPDSTIHIIDTIIVDSTIMLEDILNNLHRSPDVVAASMQVTI
                     NQLLEKETAAQRYPSVYASAGYNYNRSQTAAGNVLLNQNFVPYIGLNLSVPIYNGSVY
                     KRQQKVAEINTKNAELQQAALIRDNTSNAVKNYQAYKYSLQELQTQRENYVLAKQLLD
                     LVLLKFQLRAATIVDVKNAQDSFERVGFLLVNLSYAAKAAEIEMKRLTYQLSF"
     gene            complement(942..1544)
                     /locus_tag="VEV83_19505"
     CDS             complement(942..1544)
                     /locus_tag="VEV83_19505"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HYK47377.1"
                     /translation="MAFTLPPLPYAYNALEPHIDEKTMQIHHDKHHQAYVDNLNKAIA
                     GSEHENKSLEELLANAGKISPAVRNNGGGHWNHTFFWDILSNNGGTPSGSLSEAINST
                     FGSFDEFKTKFSAAGVGRFGSGWVWLISRDGKLEISSTPNQDNPLMDVAEVKGSPILG
                     VDVWEHAYYLKYQNRRPEYLTAIWNVINWSKAQEHFDKAK"
     gene            complement(1640..2077)
                     /locus_tag="VEV83_19510"
     CDS             complement(1640..2077)
                     /locus_tag="VEV83_19510"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HYK47378.1"
                     /translation="MNDEYYMQQALKEAEKAFDEGEVPVGAVIVINKKIIARAYNMVE
                     KLKDSTAHAEILALTSAFNFLGAKYLPDATLYITVEPCLMCTGAMYWSKLARVVWGAS
                     DEKNGHKHITDPNWPFHQKTLITTGVLKNECAQLMKDFFKQKR"
     gene            complement(2084..3037)
                     /locus_tag="VEV83_19515"
     CDS             complement(2084..3037)
                     /locus_tag="VEV83_19515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HYK47379.1"
                     /translation="MENYFARQDSGVQTGGAKMISIQTPVGNFKVWTKTIGNNPRIKV
                     LLLHGGPAFTHEYMECFESFFPHEGFEMIEYDQLGSYYSDQPTDSSLWTLDRFVEEVE
                     QVRKALALDKDNFYLLGNSWGGLLGIEYALKYQEHLKGLIICNMMASIPAYEEYNLKL
                     RSQMRKSLVDSLIAYEDKGMYKDSTYQSLVFSEYYLQHLCRLPEWPDPLLRALKHYNE
                     QIYVMMQGPSEFKTGGRLLHWDRSKDLPKITVPTLMVGAHYDTMDPDYMKWMSTQVQH
                     GRYLYCPEGSHLAMWDDQSHFYPGIIQFIKDVDAGNFSTSK"
     gene            complement(3144..5618)
                     /locus_tag="VEV83_19520"
     CDS             complement(3144..5618)
                     /locus_tag="VEV83_19520"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HYK47380.1"
                     /translation="MKNTFFKHKFFSPKIWRRVARVVVVVLCLYLLLLTGLSIYISSS
                     KERLIGFLTGKMKETILGELKVDKADITVWQTFPKIGISLTNVSISDSFYHTPFLSAK
                     QITAKFGLLDLVGSKLRINTVEVRDAVFHTFTDTSGYTNSYVLRPQNKPRREKSKPVQ
                     FENLELINVTAISEDAIKKKRYEVVIKEADADISMQGSRYKIDLNEDMIIRGLGFYVP
                     KGSWLQNQRVQARWKLEFDTTGNILSFNNTKVRIQGHPFMIKGAFFLNGPAHFHIDAS
                     TSDISYDAALAILKPTTSAKINKIKMSKGLDAKIMIDGPLAYRSLPLVRLDFSSHDND
                     LSTPVVNLNSCSFSGNFINQVDPKKPRTDDNSRVSLYSLQSNWGDINLKAQNIAVTNL
                     LQPVIQFEFYSQCTLAQLDDQLASSTLRFINGDANLYLSYNGPLISNASLLDQVNAKI
                     QVRNGKIVYVPRSLTFSECDGTVVITGNTLLINNFKCNLNTNHFVVNITGSELNRISH
                     FEPGKATINCDVFSPSLDLADLKALFAKRQQTAVRKKTRGLGGISNAVDNAVERGNLY
                     INMHADELRLHHFEAHKVIANAVFQENDWQIKQASLQHADGNFSLSAKVHQLSDDSQL
                     ADVLINLQHIDVKKLFYGFDNFGQTSITSSNLKGSMDAKANIVSGMDSHGKLITSTMN
                     GQLYFSLKNGALINHEPLQRIQQYVLKNRDLKNVEFAELTDTFDIKNGDIYIHRMPIQ
                     SSALTMYVEGIYSFADRTDISIQVPLTGLVKKSGKFDKNDNDPGRPGPSIYLRAKDKN
                     GQVKVGLDLFKKFRKDNYGKHLNDSL"
     gene            complement(5663..6394)
                     /locus_tag="VEV83_19525"
     CDS             complement(5663..6394)
                     /locus_tag="VEV83_19525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYK47381.1"
                     /translation="MQREITSWYSPSLNRDMPIVSYGHFGPAILLIPTAAADFLEYER
                     FQMIDVLAPFIEQGKIKVFSINSINKDSWLNNEMLPEHKAIRHNDFNYYVFNEVIPFI
                     RNNTSNDTFIFTCGASLGALHAMNLFLKKPDLINGTISMSGVYDLTEYTKGYWDEQVY
                     YNSPIHYIPNLTDAWYLDKIRASHHIHIYTGSGSYEDPEANRRFSQVLWDKGIGHDLD
                     IWGADINHDWPTWRAMLPYIINTKF"
     gene            complement(6430..7206)
                     /locus_tag="VEV83_19530"
     CDS             complement(6430..7206)
                     /locus_tag="VEV83_19530"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HYK47382.1"
                     /translation="MTVLALYNLKGGVGKTAAAVNLGYLFAEAGYKTLIWDLDPQASA
                     SFYLESKPLNKHQTKKILGGEIDVRDAVQSSTFKNLWILPADLSARNVDVLLDDLKKS
                     RKKLKSLLGDLKEYDVVILDCPPGISLLHENVFIAAKWIIVPNIPTTLSIRSYETVLE
                     YFRNNDLDDRKVRCFFSMVDHRKSLHHEVMQESFKEDLFFKSYLPYLSDIEKMGIHRK
                     PLFAYANRSFAAKCYRDLWEEIKKQVWREADEKDDAEPNT"
     gene            7392..>7976
                     /locus_tag="VEV83_19535"
     CDS             7392..>7976
                     /locus_tag="VEV83_19535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYK47383.1"
                     /translation="MSRRRKFIQQLALSAGAFSAGSLFNQLFAENFKVAERKIGGLSP
                     EEITKDEDYWAVIQQAYTVNPNLINLNNGGVSPAPRVVQEAVERYNKLSNEGPSYYMW
                     RILDQGREPLRHKLAALGGCDPEEVAINRNSTEALNTVIYGLDLKPGDEVIGTKQDYP
                     NMINAWKQRALRDGIQYKQISFDFPIENDQVIVDA"
BASE COUNT         2138 a         1801 c         1735 g         2302 t
ORIGIN      
        1 gtcaatcgcc gccgcgcagg aacgggttga catcataaag caacagataa atgtaggctt
       61 tgcaaacaat gccgacctat tccagtcaca actggacctc aacgccctga tagaagccaa
      121 gcaattgcag cagttgacaa ccgcccaggc aaaaactagt ctccttacgt cgttaacgtt
      181 gaaaccggac agcactatcc acatcatcga cacgataata gtcgattcca ctatcatgct
      241 cgaagacatc ctgaacaatc ttcaccgcag ccccgatgtg gtcgccgcaa gcatgcaggt
      301 tacgatcaat caattgctcg aaaaagaaac ggcagcccaa cgttatcctt ccgtttacgc
      361 aagcgctggt tacaattaca atcgctctca aactgctgcc ggcaatgtat tgctgaacca
      421 aaattttgtg ccttacatag gattgaattt atctgtaccg atctacaacg gttctgttta
      481 caagcggcaa caaaaagtag cagagatcaa tacaaaaaat gcggagctgc agcaggcagc
      541 gttgattcgg gataatacct cgaacgctgt aaaaaattac caggcatata aatattcgct
      601 gcaggaattg caaacgcaaa gggaaaacta cgtactcgcc aagcaattgc ttgacctcgt
      661 gttattaaaa ttccagttgc gggcagctac gatcgtcgac gtgaaaaacg cgcaagatag
      721 ttttgagcgt gttggatttt tgctggtgaa tttaagttat gcagcaaaag cggcagaaat
      781 tgaaatgaag cgattaacgt accagctcag cttttaatcg ctatcatcag tttcgattca
      841 catcggaacg cggaattata aattttgaat cttttatggc actgaaatct ttcaggtaaa
      901 aaatcccgct gttcggcggg atgatttatt tgaagttgat tttattttgc tttatcaaaa
      961 tgttcctgcg ccttactcca gtttatcaca ttccagatcg ccgttaagta ttccgggcgc
     1021 ctgttttgat atttcaggta atacgcatgt tcccaaacgt cgacgccgag gattggacta
     1081 ccctttactt ccgccacatc catcaatggg ttgtcctggt ttggtgtgga agatatttca
     1141 agctttccat ctctcgagat caaccaaacc cacccgcttc caaaacggcc aacgccggca
     1201 gcgctgaatt ttgttttgaa ctcgtcaaaa gagccaaacg tgctattaat cgcctcagat
     1261 aaacttccgg aaggagttcc gccgttattc gacagaatat cccaaaaaaa agtatgattc
     1321 cagtggccac cgccattgtt gcgaacagca ggagatatct tccctgcatt cgcaagtaat
     1381 tcttccagcg atttattttc atgttcgctt ccggcgatag ctttatttaa attatcaacg
     1441 tatgcctggt ggtgcttatc atgatggatc tgcattgtct tttcatcgat atgaggttct
     1501 aatgcattgt atgcgtacgg cagcggaggt aatgtgaaag ccatagatgt gattttagat
     1561 ttacaatttc agatttacga tttattcgaa tgggaaggca aaattaagct ttaccgatta
     1621 atatcgtttg cctgaagctt catcttttct gcttaaagaa atctttcatt aactgtgcgc
     1681 attcattttt taagacgccg gttgttatga gtgtcttttg atggaatggc cagtttgggt
     1741 cagtaatatg tttgtggcca ttcttctcat cgcttgcgcc ccaaacgaca cgtgcgagtt
     1801 tgctccagta catggcgccg gtgcacatca ggcaaggttc taccgttata taaagcgtag
     1861 cgtcgggcaa gtacttcgcg ccaagaaaat tgaacgctga ggtgagagcg aggatttctg
     1921 cgtgcgcggt tgaatctttg agcttttcaa ccatattata cgcccgcgca atgatctttt
     1981 tgttgatcac gatcaccgca cctaccggca cctcgccttc atcaaatgct ttctccgcct
     2041 ctttaagcgc ctgctgcata taatattcat cgttcaacaa ctcttattta gaggttgaga
     2101 aatttccggc gtcaacatct ttgatgaatt ggataatgcc aggataaaaa tgcgactggt
     2161 cgtcccacat cgcgaggtga ctgccttcag gacaatataa gtaccggccg tgctgcacct
     2221 gcgtgctcat ccatttcatg taatccggat ccatcgtgtc ataatgtgcg ccgaccatta
     2281 atgttggaac cgttattttg ggaaggtctt tgcttctgtc ccaatgtagt aatctaccgc
     2341 ccgtcttaaa ttcactcggg ccttgcatca taacgtagat ctgttcattg taatgtttaa
     2401 gtgcacgcag taacgggtcg ggccactctg gcaacctgca cagatgctgc aagtagtatt
     2461 cgctgaagac aagcgactgg taggttgaat ctttatacat gcctttatct tcatacgcta
     2521 tcaaagaatc gaccagcgac tttcgcattt gacttcttag tttcaaattg tactcttcat
     2581 acgcgggaat actggccatc atattgcaga tgatgaggcc ttttaaatgc tcctggtatt
     2641 tcaacgcgta ttcaatgccc agcaagccgc cccaggaatt tccaaggagg tagaaattat
     2701 ctttatcgag tgcgagagct ttacgcacct gttccacctc ctcaacgaac ctgtccaatg
     2761 tccatagact actatcggtg ggttgatcac tgtaatatga gcccaactga tcatactcga
     2821 tcatctcaaa accttcgtgg gggaaaaaac tttcgaagca ctccatatat tcatgggtga
     2881 atgccgggcc gccatgaagt aatagaactt ttattcgcgg gttgttgccg atcgtcttag
     2941 tccaaacttt aaagttgccc acgggcgttt ggatggatat catttttgca cctccagttt
     3001 gcacgccgct atcctgccgc gcaaaataat tttccaaggt ggtgcttttg ctttcagtac
     3061 tttccttaca tgaacaaaag atgaatgccg atatggcgaa tgcaacggaa aattttctca
     3121 taaacattcc atgatggcta aagttataaa gaatcgttca ggtgctttcc ataattgtcc
     3181 tttctgaatt ttttaaagag gtcaaggccg actttcacct ggccattctt gtccttagca
     3241 cgcagataaa tactgggtcc tggcctaccg gggtcgttgt cgttcttatc gaacttaccg
     3301 gattttttca ccaagccggt taaaggtacc tggatcgata tatccgttcg gtcggcaaag
     3361 ctgtaaatac cttcgacata catggtcagg gcggaagatt ggattggcat ccggtgaata
     3421 tagatatctc cgtttttgat gtcgaaagta tctgtcaact cggcaaactc aacatttttc
     3481 aggtcacggt ttttcagcac atattgctga atgcgctgca gcggttcgtg attgataagc
     3541 gctccgttct tcagtgaaaa atacagttgc ccattcattg ttgacgtgat cagttttcca
     3601 tggctatcca tacccgacac aatatttgct ttagcatcca tgctcccttt gagattggaa
     3661 gaggtgatac tggtttgacc aaaattgtcg aaaccataaa ataatttttt tacatcgatg
     3721 tgctgcaggt tgataagcac atccgcgagt tgggaatcat cactaagctg atgaaccttt
     3781 gcagacaagc tgaagttacc gtctgcatgt tgtaatgacg cttgttttat ctgccagtca
     3841 ttttcctgga atactgcatt ggcgatcacc ttatgcgctt caaaatgatg gagccttaat
     3901 tcatcagcat gcatgttgat gtacaggttg cctctttcaa ccgcattgtc gacggcgttg
     3961 gatataccac caagtccgcg agtctttttt cttacagcag tttgttgcct tttagcgaac
     4021 agggctttaa gatctgcaag atcaagtgaa ggagaaaaga catcgcaatt tatcgttgcc
     4081 ttacccggtt caaagtgtga aatacggttc agttcgctgc ctgtgatatt tacaacgaag
     4141 tggtttgtgt tgagattaca tttaaagtta tttatcaata aagtatttcc ggtgatcacc
     4201 acggttccgt cgcattctga gaaagtaaga ctgcgcggaa cgtacacaat ttttccattc
     4261 cgtacctgga tctttgcatt cacctggtcg agcaaagacg cattcgagat caacggtccg
     4321 ttataagaca ggtacaaatt cgcatcgcca tttataaaac gaagtgttga agaagcgagc
     4381 tgatcatcta gttgcgcaag tgtgcactgc gaatagaatt caaactgaat gaccggttgc
     4441 aacaaattag taacggcaat gttctgcgct tttaagttga tatcgcccca attactctgg
     4501 agagaatata agctcaccct cgaattatcg tcggttcttg gcttcttggg atcgacctgg
     4561 ttgataaaat tgccgctgaa actgcaggag ttcaaattca cgaccggggt tgagagatca
     4621 ttatcgtggc tgctgaaatc cagtctcacc aaaggtaaac tccggtaagc aagagggcca
     4681 tcgatcatga tctttgcatc gagtcccttt gacattttga tcttgttgat cttcgcactc
     4741 gtggttggct ttaagatcgc cagtgccgca tcataagaaa tgtctgacgt tgatgcatca
     4801 atatggaagt gcgctggtcc gttaaggaaa aatgcacctt tgatcatgaa cggatggcct
     4861 tgtatcctga ctttcgtatt gttgaacgac aaaatatttc ctgtcgtatc aaattcaagt
     4921 ttccaccggg cctgcacgcg ctgattttgc agccacgatc ctttcggcac gtaaaagccg
     4981 agcccgcgga ttatcatgtc ttcattgaga tctattttat accgtgagcc ctgcatgctg
     5041 atatccgcgt cagcttcttt gatcacaacc tcgtatcgct ttttctttat agcgtcttcg
     5101 ctaatggccg ttacgttgat caactcgaga ttttcaaact ggacaggttt acttttttca
     5161 cgcctcggct tattctgcgg gcgcaacaca tagctgttgg tataaccgct ggtatcagta
     5221 aatgtatgga agacggcgtc tcggacctct actgtgttaa tgcggagttt cgatccgacg
     5281 agatctaaca aaccgaattt agcagtgatc tgttttgcac tcaaaaatgg cgtatgatag
     5341 aaggaatcgc tgatgctcac gtttgtcagg ctgataccga ttttggggaa cgtttgccac
     5401 acggtgatat ctgctttgtc aactttgagt tcacctaaaa tggtttcctt catcttgccg
     5461 gtaagaaagc caatcaatct ttctttggag gacgagatat aaatactaag gcctgtcagc
     5521 agtaaaagat acaggcaaag aacaacaaca accacgcgtg caactcgcct ccaaattttg
     5581 ggtgaaaaaa atttgtgttt aaagaatgtg tttttcatgc ccactgtgta tataaaaaac
     5641 cccgccaacc tgcggggatg ttttagaatt ttgtattgat aatatacggc agcatcgcac
     5701 gccaggtagg ccagtcatga ttaatatcag cgccccatat gtcaagatca tgtccaattc
     5761 ctttatccca caaaacctgt gaaaaccttc tattcgcttc cggatcttca taagaaccac
     5821 tgccggtgta aatatgaata tggtgactcg ccctgatctt gtcgagatac catgcgtccg
     5881 tcaagttggg gatgtaatgg atcgggctat tgtagtatac ctgttcatcc caatatcctt
     5941 tggtgtattc agtgaggtca tagacgccgc tcatactgat ggtgccgttg ataagatctg
     6001 gcttttttaa aaataaattc atcgcatgca aggcgccgag cgaagctccg cacgtaaaaa
     6061 tgaatgtgtc gttgctggtg ttattgcgaa tgaacgggat cacttcgttg aaaacataat
     6121 agttgaaatc gttatgcctg atagccttgt gctcaggcaa catttcgttg ttaagccaac
     6181 tatccttgtt aatactattg atgctgaata cttttatttt accttgttcg ataaaaggcg
     6241 ctaatacatc tatcatctgg aaacgttcgt actcgagaaa gtctgcagct gcggttggta
     6301 taagcaaaat tgcgggtcca aagtgaccgt agctcacgat aggcatatcg cggttgagcg
     6361 aaggactgta ccatgatgta atttctcttt gcataaaaaa attttgttac tgaattttcc
     6421 ggcgctattt caagtgtttg gttcggcgtc atctttttca tctgcttcac gccacacctg
     6481 cttctttatt tcttcccaga gatcgcgata acatttggcg gcgaagctgc ggttagcata
     6541 tgcgaatagt ggcttgcggt gaatgcccat tttctctata tcgctcaaat aaggcaggta
     6601 actcttaaag aataaatctt ctttgaaaga ttcctgcatc acttcatgat gcaagctctt
     6661 acgatgatct accatgctaa agaaacatct tacttttcta tcatccaaat cattgttcct
     6721 aaaatattcg agcaccgttt cataagaacg aatcgacaat gttgttggga tattcggcac
     6781 aatgatccat ttagcggcga tgaaaacatt ttcgtgcagc agcgaaatac ccggcgggca
     6841 atccagtatc acaacgtcgt attctttaag atcacctaat aatgacttga gcttctttcg
     6901 gctcttcttt aagtcgtcca gcaatacatc cacgttgcgg gccgacaggt ctgccgggag
     6961 gatccaaaga tttttgaacg tagagctttg gaccgcgtcg cgcacatcaa tttcgccgcc
     7021 caatatcttt tttgtctggt gcttgttcag tggttttgat tcaaggtaga acgacgccga
     7081 tgcctgggga tcaagatccc agatcagcgt tttataacct gcctccgcaa aaagataacc
     7141 gaggttaaca gctgcggcag tctttccaac tccaccttta agattatata atgcaaggac
     7201 tgtcaccgct ctaaagtaca aaacatttaa agaggcttca gcccaaatta attgagccgg
     7261 aaaatgtttg gcaccgattg ctgccgccgc agggatcggc gtaaaatgca cagtggtctc
     7321 cgatatcgaa gcggtcgtaa attaaaacga gtctcaactt aaaatcttgg taactttcaa
     7381 caaaaaattt tatgagccgc cgcagaaaat ttattcaaca gcttgcgctc tctgcgggtg
     7441 cattttctgc aggcagtttg ttcaaccaac tgtttgctga gaattttaaa gttgccgaac
     7501 gaaaaatagg cggcctctcg cccgaagaaa taacgaagga tgaggattat tgggcagtta
     7561 tccaacaagc ctacaccgtt aaccctaatc ttatcaattt aaataatggc ggcgtgagcc
     7621 cggcaccgcg cgttgtgcag gaggcagtgg agcgttataa caaattaagt aatgaaggcc
     7681 cgtcgtacta tatgtggcgc atactcgacc agggccgtga accacttcgt cataaacttg
     7741 ctgcactggg tggttgcgat ccggaagaag tagccattaa tcgtaattcc acggaggcgt
     7801 tgaacaccgt gatctacggg ctcgatctca aaccaggcga tgaagtgatc ggcacaaagc
     7861 aggattatcc gaacatgatc aacgcatgga aacaaagagc cttgcgcgac ggcatacagt
     7921 ataaacagat cagttttgat tttccgattg aaaatgacca ggtcattgtt gatgca
//
LOCUS       DASQJI010000734        21580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2256372,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000734 DASQJI010000000
VERSION     DASQJI010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 21580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21580
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2256372"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1101
                     /locus_tag="VEV83_19540"
     CDS             <1..1101
                     /locus_tag="VEV83_19540"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HYK47384.1"
                     /translation="SSADSTQNDSSSKTELIPPAKNFQATIDGKRTDLYTLKNGNMQV
                     AITNYGARVVSIVVPDHNGKPTDVSVGFDAVQPYTEGADTYFGAIVGRYGNRIAKGKF
                     TVDGKQYTLATNNGANSLHGGNKGFSRVVWDAQQVNDSTLVLSYLSKDGEEGYPGNLH
                     SKVTYTLSSNDQLKIDYEATTDKSTVINLTNHTYFNLNGQGNGSILDHTVMINADRYT
                     PVDSTLIPTGKIVAVKGTAFDFTTPTTIGARVNDTTDQQIKFGRGYDHNFVLNSKGNL
                     HEKAAEVTGDQSGIVMDVYTLEPGLQFYVGNFMNGSHTIKGGKKDDYRSAFCMETQHY
                     PDSPNQPTFPSTRLSPGQQYKTTTIYAFSVNK"
     gene            1365..1940
                     /locus_tag="VEV83_19545"
     CDS             1365..1940
                     /locus_tag="VEV83_19545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYK47385.1"
                     /translation="MHKKEVVPVIPSKEMVIGTAKAPVRLTVFGDYESAETRELNEVI
                     KKVFDTFKEDVNFVFRHFPLTHIHQRAHKAAEAAIAAGQEGKFWEMHQQLLENPHALG
                     VISLKSHSREAGVVNKKFLEQLMNGDFGWYVQDDIREGLELGVRDIPALFINGKMMDK
                     PLTINRVNSAIRKELSNAKGASVKGKSRAAA"
     gene            complement(2175..2345)
                     /locus_tag="VEV83_19550"
     CDS             complement(2175..2345)
                     /locus_tag="VEV83_19550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47386.1"
                     /translation="MNKKLVTGAVLALAAGLVTLFVRKRKRKLSTVASDAYHTGNNTM
                     NYIERKTENAFS"
     gene            complement(2392..3042)
                     /locus_tag="VEV83_19555"
     CDS             complement(2392..3042)
                     /locus_tag="VEV83_19555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HYK47387.1"
                     /translation="MKNSPKKTSGSSTRTASSKTKTTGNRPGRQQQNGSGNKEDLAKV
                     FEETLKDIYWAEKYLTKALPKMSKAAYDEDLRAAFDEHLQQTEEQVERLDQVFEQLGK
                     KAAGKKCPAMEGLVEEGKEAIDEYDPGFARDAALIISAQKIEHYEIATYGSLKAHAEM
                     MGEQEIASLLDQTLQEESETDEKLTELSGNINQQAYQEGGEMEDTEEDTEDEEEEV"
     gene            3404..5884
                     /locus_tag="VEV83_19560"
     CDS             3404..5884
                     /locus_tag="VEV83_19560"
                     /inference="COORDINATES: protein motif:HMM:NF039501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5686 family protein"
                     /protein_id="HYK47388.1"
                     /translation="MKKTIFYISLLCFFPMFLNAQARILQGEVLDKQSEEPIPFAAIK
                     FLRLGGGVLTDSAGRFTLQLNNWPAADTLHITSVGYTPLDIPVANFRDSSFLTIHVTL
                     LPPQHEVVVKTKYNRALWFWRKIIAHKPQNDKHHFDNYGYEVYNKLELDLDKVNKEKL
                     ANTPFLKPLRFVLDYTDTTSEKEPYLPVYLTESLSDYYFQKDPRRTREVIKATITNGI
                     DNESVIRQLGTTYQNVDVYNNSIPVFDKMYVGPFSDNADNFYNFKLLDTQYLSGKRLV
                     HFAFTPKHPGGDMFTGDCWIHDTSFSIQKITLRPALDANINYITGLTLIQEFRLIYDT
                     VWFLYKDKFVADLSLIGRNHISFKARKTATYKDVLINSDYVTANLDSNKSNEEILLRP
                     NVLNQPDSFWIQHRHEPLNKDEQTVYRVLDTLEKNKTYIQYRNTLNFLTTGTKDIGNV
                     RIGPWYNWITGNSWEGTRLRFDLSTNRHFSDHVYLHGYLAYGFNDAKFKGKAEVRYQF
                     SRVPWSYVNLSYKNDLDNGQVYYDQLGTDNIIAFFFRKPNIPHKYQQITDRRLEYYSE
                     THNGFGFGLTASSRQYKALLNLPGDELYPVKEGKPFNTFETILRLRYAYQERTVDENF
                     SRISFGSDFPIIELRYTHGWPGVFNSSYKYDKLDLSVSDYVNIAPYGSLYYNFFGGKA
                     FGTEPYQMLNIPPGNDWYVYSKYSFNLMTRFQYLTDQYAGFSFEHNIGSGIFRYIKPT
                     RKLKIRQFWEVKGLVGDLSDANKQLNFVSDTSFQTLNNKMYLEIGTGIDNILKFFRVD
                     FIWRVLPQPLPENHVERFGVFVGARLSL"
     gene            complement(6011..7435)
                     /locus_tag="VEV83_19565"
     CDS             complement(6011..7435)
                     /locus_tag="VEV83_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HYK47389.1"
                     /translation="MTNEQLDQLQSNLRGKLIKPADEEYESARKVYNGMIDKRPDAVA
                     QCADVADVIACVNFARENKLLLAVRGGGHNAGGLGVADGALVIDLSHMKGIHVDPVAK
                     TALVQGGCLLKEVDHATNAIGMAVPSGIFGTTGVGGITLGGGLGHLTRKYGLSIDNLL
                     EASVVLADGSYVKASATENPDLFWALRGGGGNFGVVVSFLFKLNPAGMIYGGPVLYDI
                     SEAKEVMTWYRDFILNAPENVNGFFAFLTVPPFAPFPEHLHLKKMCGVVWCCTGPAEK
                     SEAALKPMRDFKTAALDWCGPMPLPALQTMFDPLMPPGLQWYWKADFVNELSDEAIDL
                     HVKHGNKMPTPLSTMHLYPVNGAASRIGNSDTPWNYRHANWAEVIVGIDPDPANREAI
                     TNWSREYFNELHPHSAGGAYVNFMMDEGEERIRATYGDNYERLAAIKAKYDPNNLFRV
                     NQNIKPAPIEVKVAFAEPPGVHAN"
     gene            7763..9613
                     /locus_tag="VEV83_19570"
     CDS             7763..9613
                     /locus_tag="VEV83_19570"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK47390.1"
                     /translation="MKSLLLAFSILFVISDVTAQALPVPRNYQKAYDNHTRSSDGRPG
                     LHYWQNKAAYKIDVTFEPGSRKISGKETIVYTNGSPDTLGQIWFKLYPNVYQKGSARS
                     FRIDPEDVSDGMRIESVAVDDKTRSTDALSIDGTEMWLPVPAVLPGKQIKFELSFSYV
                     LNKGSHERTGMIDDSSAFIAYFFPRIAVYDDIDGWNKNPYLGSQEFYNDFCDFDVHIT
                     VPKNYIVSATGNLQNANDVYLPSVVKRIATAEASDGITRIIDTTDKQVTAQNETNTWK
                     FQADNVTDFAFATSNHYIWYASSLVVDPATSRRTRVDAVFNPHHKSYFDVIDFARKTV
                     EVMSYRFPAWPYPYPHETIFDGLDQMEYPMMVNDNPLDEKADAIELTDHEIFHTMFPF
                     YLGINETKYAWMDEGWATIGEWLISPLIDSTIADEYGMYSYNADADYDLDAPITTLST
                     QQNGASYFLNAYAKPGMGYLYVKDMLGDELFTKALHYYIAQWQGRHPIPQDFFNCINT
                     GSGKNLNWFWKSWFYDRGAPDLAISNVKKTGSSITVTIKMKGSKPVPVHLTVYYKDGS
                     EQKLHQSIAVWEKANTASISFTATGAIQKIVLGELHDADIDSSNNVYIPH"
     gene            complement(9676..10773)
                     /gene="pdxA"
                     /locus_tag="VEV83_19575"
     CDS             complement(9676..10773)
                     /gene="pdxA"
                     /locus_tag="VEV83_19575"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HYK47391.1"
                     /translation="MGNEQQKPLIGFTCGDLNGIGIELIIKALSDSRIFEQCTPVIFA
                     SNKSINFYRKSLPEINFAYQAVRDFSRISQKQVNIFNCWDEEVPINPGLLNETGGKYA
                     KISLQQAAKALKEIQIHGLVTAPIHKKNIQSADFAYTGHTPFLKSMFALKDVLMLMTA
                     SNMRVGVVTEHVPLKDVTQEITKENIISKLSILNSSLKRDFGIDKPRIAVLGLNPHAG
                     DDGLIGNEEQTIIKPAIRECKDKGGLVFGPYSADAFFARAQFQSFDAVLAMYHDQGLI
                     PFKSLAVGEGVNFTAGLPAVRTSPDHGTALDIAGKGKADPSSFLAAIFECVDIINRRA
                     AYDENHSNPLRKMSNVIIANATDEAIEVSEE"
     gene            10823..11674
                     /gene="rsmA"
                     /locus_tag="VEV83_19580"
     CDS             10823..11674
                     /gene="rsmA"
                     /locus_tag="VEV83_19580"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HYK47392.1"
                     /translation="MQKPITLLVYLSTYQLVNLLTTSSTNTFAFMHYTLKKSLGQHFL
                     KDENVCRKIISALGKQKFERLLEIGPGGGALTKFLLNIDGIDFKAIELDEEKVNYLSR
                     AYPELNGKLIHEDFLEASAPFEQEFIIIGNFPYNISSQILFKILEWKEKVPAVIGMFQ
                     KEVAQRIISKPNSKSYGILSVLVQAFYDVHYLFDVPPSCFVPPPKVMSGVIELNIRSA
                     PVQPKTEKELFTLVKTAFNQRRKKLRNAVRSLFDDDILTDAIFDKRAEQLSVEDFANL
                     TFKMKEV"
     gene            11671..12612
                     /locus_tag="VEV83_19585"
     CDS             11671..12612
                     /locus_tag="VEV83_19585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK47393.1"
                     /translation="MIKKKAIVTARVHSYLIDELHLKGYDVSHIPAVTYEELQSLIVD
                     ATGLVVTTRLKVDRNLLEKTRQLKWIARLGSGMELIDVPYAESKGIVCVSSPEGNRNA
                     VAEHALGLLLNLLNNITSSFEEVKQGKWIREANRGEELSGKTVGIYGYGNTGSAFAKL
                     LEPFNCTVLAHDKYKFGFAKGYVREAEPDQIARYADVISLHLPLTEETLHYANQHFFQ
                     QLEKKPIFLTTCRGKVSDTSAIIDALDNQLVRAAGIDVLENENLSAYNEHEKTQLQNL
                     AARKNVIITPHIAGYSHEAFYKMAKIVLDKLDEKRCL"
     gene            12771..13244
                     /gene="greA"
                     /locus_tag="VEV83_19590"
     CDS             12771..13244
                     /gene="greA"
                     /locus_tag="VEV83_19590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HYK47394.1"
                     /translation="MNDVMYVSKDAFERMRQELQRMKSVDRPAASRAIAEAREKGDLK
                     ENAEYDSAKEAQGMLEAKIALLESQIANSRIVDESEIDTSKVSILTRVTITNIATKKT
                     VTYQIVGEKEADLKANKISISSPIGQGLLGKQKGEVAEVRAPTGIIKFKVDEITL"
     gene            13344..13739
                     /locus_tag="VEV83_19595"
     CDS             13344..13739
                     /locus_tag="VEV83_19595"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HYK47395.1"
                     /translation="MSIFSKIIAGEIPSYKIAEDERFFAFLDIFPLVEGHTLVVPKTN
                     VDNMFDLGDEYLSSLLVFAKPIAKAIERSFNCNRCGIAVIGLEVPHAHLHLVPINSAD
                     DLNFTRGKMKLSEHQLEEAQQKIIEKLNG"
     gene            complement(13796..14365)
                     /gene="ruvC"
                     /locus_tag="VEV83_19600"
     CDS             complement(13796..14365)
                     /gene="ruvC"
                     /locus_tag="VEV83_19600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HYK47396.1"
                     /translation="MNPSRTTILGIDPGTVVMGYAVLEVNGKSIQLVSMDVLKLMPER
                     DTYRRLEMIFSKVCELITLYHPTMFAIEAPFFGKNVQSMLKLGRAQGVAIAAAMQASL
                     PVSEYSPKRVKQSITGNGNATKEQVFKMLQRLMTLEERPHFFDASDALAVAVCHHYSS
                     FSDGLVKKKPLRGWADFLSRNPDRLSSLK"
     gene            14476..15450
                     /locus_tag="VEV83_19605"
     CDS             14476..15450
                     /locus_tag="VEV83_19605"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HYK47397.1"
                     /translation="MLGPALFIVLGFVIYIKVKHQPDLPGKLSLLKNTFSNGGIWQAV
                     LLVLLACANWGIEARKWQLLMRPVERVSFLTSIKAVLSGLALSLFLPNGLGEYPARAL
                     YMREGNRLRSVALNIAGSMSQLIVTLVAGIGSLIYLRYYSWGTNPEMQGISVLWVDGV
                     ISMIAMGTVLLIFTYFRLSWLTMLFEKIPFVFRYKYFIEQLETFHWKELTRILNLSCI
                     RFVVFIVQYVLVLHVLRVEIDFADAVCTTCVLFLLLAILPTIPFADVGIRGEAGRQLF
                     GLLTADVFGVVVTTSVIWFVNLIIPSIAGSLFLLGIKIFKKQEKSTSA"
     gene            15447..16238
                     /locus_tag="VEV83_19610"
     CDS             15447..16238
                     /locus_tag="VEV83_19610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HYK47398.1"
                     /translation="MRKFFSTVMGSLIYLTLSAGDDFCGTRNTAFAPNEVLTLNVFYN
                     VIGLYINAGTASFTTTLERYNNRPVYHVVGEGHSNSHYDWIFKVRDRYESYFDTATLK
                     PVKFIRNVDEGGYTKREDVTFNQQNNTATTLSGVFKVPNCVQDVLSAIYYARNIDFNR
                     YKVDDKIPFSMFLDNQVYNLYIRYMGKEIIKTRYGKFRAIRFKPLLVKGTMFEGGEKM
                     EVWVSDDANHIPLRVESPIVVGSVKVDMMQYRNLRYPLSSKISAR"
     gene            complement(16225..17250)
                     /locus_tag="VEV83_19615"
     CDS             complement(16225..17250)
                     /locus_tag="VEV83_19615"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HYK47399.1"
                     /translation="MKVAVVGATGLVGSKMLQILEERNFPVTELIPVASERSVGKDVS
                     FKGSTYKVVSADDAIAARPAVALFSAGGSTSLELAPKFAAAGITVIDNSSAWRMDPTK
                     KLVVPELNADVLTEDDKIIANPNCSTIQMVVALNPLHKRYKIKRIVVSTYQSVSGTGK
                     KAVDQLFNERDGINDGPMAYKYQIDLNAIPQIDVFLENGYSKEEMKMVHETKKIMRDD
                     DIRVTATTVRIPVIGGHSESVNVEFDNDFDVNEVKQLLREAPGVVVQDDPSQQLYPMP
                     LWAHEKDEVFVGRIRRDETQANTLNLWIVSDNLRKGAATNAVQIAEYLLEHKLLKAGN
                     KLEAIEH"
     gene            complement(17473..19503)
                     /locus_tag="VEV83_19620"
     CDS             complement(17473..19503)
                     /locus_tag="VEV83_19620"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYK47400.1"
                     /translation="MKHRFLFGMVSLTACVIISCNGKKEYVAQQYIDTRGLDSSLKPG
                     DNFFLYAVGKWYDTVKIPSTEMGVGSFFDLEKRTRDQLQTILQSVSDGKQAAGSIEQK
                     VGDFYVSGLDTATLEKRGYDPVKPYLARIDSIKTPAEIMKYVAEMQAQNVNLLFMFGV
                     IPDDKNSAMNIAAFMQGGIGLPDRDYYFRSDPATMAVVSAYKKYIEKLFTLTGDDSVR
                     AAKKVSMVYDLETKMAGSHKTNVALRDPQTNYHKMLVAQLDKEMPAFAWTSTLNQMGI
                     HTDSVNVQQPEFYQKTNELLRNASVDQWKAYLRFQTIAAYVNVLSDEFENADFDYEKT
                     ITGQSEIKPRWERIVSSTDGHLGDALGELYVKKYFPESSKARMLELVDNLQKAFAARI
                     DHLDWMSDSTKAKAKEKLNAFIKKIGYPDKWRDYSKVTIDRSKYFENRVSADINNYEY
                     QVAKVGKPVDRTEWGLTPPTINAYYNPYFNEVVFPAGILQSPFFDANADDAVNYGGIG
                     AGIGHEMTHGFDDQGAQYDKDGNLKNWWSKEDSEKFAAKTKSVIDLYNTFTVLDSLHI
                     NGALTNGENIADIGGLAIAYDAFKLTKQGQDTTKIDGLTPDQRFFLSFAQIWKIRMKD
                     ELMRTIINTNQHSPSMWRVNGALMNCSPFYTAFNVQPGDKMYRPDSARIKIW"
     gene            complement(19571..20290)
                     /locus_tag="VEV83_19625"
     CDS             complement(19571..20290)
                     /locus_tag="VEV83_19625"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HYK47401.1"
                     /translation="MNLPYFYEENIQGPVHTLTEETSRHCVQVLRMKNAEQLQLTDGK
                     GNLFFATISDANKKHCKVVVDNLRGHVDSAPGTKKVCIAISLLKNPSRFEWFLEKAAE
                     IGVAEIIPLICEHTEKENFRYERMNNILISAMLQSRQTWLCELRQPEKFDDAIDSASP
                     GLKLIAHCAEEKKENIADMARIVNNVCILIGPEGDFSRREIQAATEKNFIPVSLGNTR
                     LRSETAGLVAATLLMNERIRK"
     gene            complement(20355..21215)
                     /locus_tag="VEV83_19630"
     CDS             complement(20355..21215)
                     /locus_tag="VEV83_19630"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HYK47402.1"
                     /translation="MFPAVSVELHKNGRPVKIHLISTGAVSVKTKFRDARKTGVWAMI
                     DFMLDKNFTEWMPIWVMIIEHPAGVFVIDTGENADVNNPGYFKSSGLFANWFDTTQFK
                     FDVKPEEEVGPQLGKLGIKNADITSVILTHLHLDHIDGLRYFPNTKILVNKFEWDKPF
                     GDLPKLYPSWFKPTLVDLNDRYDVFDRAFYLTPGKEMVFVQTPGHTYGHCSVIVDCDE
                     ACIFFGADICYSQDQLVNERYSGTNAKHALAQDTYTKVKAFSKGRNVIFIPSHDQHAG
                     QRLKKLTPVF"
     gene            complement(21296..>21580)
                     /locus_tag="VEV83_19635"
     CDS             complement(21296..>21580)
                     /locus_tag="VEV83_19635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HYK47403.1"
                     /translation="NEMGESTRGETHLKIAKHRNGSLENIKLRALLHIQRFEEWDGDT
                     GANPLGSQWKPLNPPPGKTGGDDNARLFIQKGSRMNNGEFDEGLEEENPF"
BASE COUNT         5941 a         4853 c         4652 g         6134 t
ORIGIN      
        1 agctcagcag atagcacgca aaatgattca tcgtcgaaga ccgagttaat tccgccggca
       61 aaaaatttcc aggcgaccat cgacggaaaa cggacagatc tgtacactct gaaaaatggt
      121 aacatgcagg tagccataac caactacggc gcaagagttg tgagcatcgt tgtgcctgac
      181 cataatggaa agccgaccga tgtttcggtt ggctttgatg cggttcagcc atacacggaa
      241 ggcgcggata cttatttcgg cgccatcgtt ggccgctacg gcaaccgtat tgctaaaggc
      301 aagtttactg ttgacggaaa gcagtacaca ttagcaacga ataacggagc aaacagtttg
      361 cacggcggca acaaaggttt ttcacgcgta gtgtgggatg cgcaacaagt gaatgattcc
      421 acactcgttc tctcctatct ttcaaaagat ggtgaggaag gatacccggg caacctgcac
      481 tcaaaagtca cctatacact gtcgagcaat gatcagctga aaatagatta cgaggcaacg
      541 accgataaaa gcaccgtaat aaatctaacg aaccacacgt atttcaattt aaacggacag
      601 gggaacggaa gcatcctgga tcacaccgtg atgataaacg ccgaccgtta cacgccagtt
      661 gattcaacgc ttattccaac agggaaaata gtagcagtaa aaggaactgc tttcgacttc
      721 accactccga ccacaattgg cgcccgcgta aatgatacca ccgaccagca aataaaattc
      781 ggccgggggt atgatcacaa ttttgtactg aattcgaaag gcaacttaca tgaaaaagct
      841 gcggaggtca ccggcgatca atcaggaata gtaatggacg tttatacgct cgaaccgggc
      901 ctgcaatttt atgtaggcaa tttcatgaac ggaagccaca cgatcaaagg agggaagaaa
      961 gatgactata gaagcgcctt ttgtatggaa acccaacact acccggattc tcccaatcaa
     1021 ccaacttttc cgtcgaccag gttgagcccc gggcagcagt acaagacaac aacgatctat
     1081 gcattttctg tgaacaaatg atctggccgg actgacaatg ccttgtagtc cactggtttt
     1141 tagctggttc ttataaccga aaatgacttg cccttcaacc cgaggcaacc gttcaggctt
     1201 gtcatttacg ttcatcaatt tgaaaattcc aaccgccaaa gcggcggaaa aatatttctt
     1261 taacatgacg aaactggttg gaaaataatt tgcacctatt ttgcagtcct caggaatcaa
     1321 attaaaagac cctggtttca ggggcaacca gaaaaggaga atttatgcat aagaaagaag
     1381 tagtacctgt gataccctcc aaagagatgg taatagggac tgcaaaggcg ccggtccgat
     1441 tgacggtatt tggcgactac gaatcggcag aaacgcgcga actaaacgaa gtgatcaaaa
     1501 aagtgttcga cacttttaag gaagacgtga attttgtttt tcgtcatttt cctttaacgc
     1561 atatccatca gcgggctcac aaagcggcag aagctgcgat cgctgccggc caggaaggaa
     1621 agttttggga aatgcaccag caattacttg aaaatccgca cgcgctcgga gtgatctctt
     1681 taaagtcaca ctcccgcgaa gcaggtgttg taaataagaa attccttgaa caattgatga
     1741 atggcgattt cggctggtac gtgcaagacg atatccgtga aggattggag ctgggggttc
     1801 gcgacatccc ggctttgttc atcaatggaa aaatgatgga caaaccgctg acgataaacc
     1861 gcgtcaatag cgcgatcagg aaagaattat ccaatgctaa gggggcttcc gtgaaaggta
     1921 agtctcgcgc tgctgcctga tatttgtaac aggttgaaag tactcgaacc gatcagcgat
     1981 ttgtattagc cggaattttc attttcgctt gtctttaata gtagttgctt attaggtatt
     2041 tccgcgtttc caatgatcac attattggga ttgcggcgct cgtttgggaa tcaacagccc
     2101 gcatcaccat cgtacgtcta taaaaaaatc cccccgcaaa ttctgcggag ggactttttc
     2161 aaattgtcta actgctacga aaaagcattt tccgtttttc tttcgatgta gttcattgtg
     2221 ttatttcctg tgtgatacgc atcggaagca accgtgctta gtttcctttt tctttttcta
     2281 acaaagaggg tgactaagcc tgcagcaaga gcgagtacgg cccctgtaac taatttcttg
     2341 ttcataattg attttttaaa gtatttgcaa acttgtgaaa acgtgtttta cctacacttc
     2401 ctcctcttca tcttctgtat cttcttcggt gtcttccatt tcaccacctt cctggtaagc
     2461 ctgctgattt atgttccccg aaagttcagt cagcttttca tcggtttccg attcttcctg
     2521 cagtgtttga tcaagaagag aagctatttc ctgttcgccc atcatttccg catgcgcctt
     2581 taaggaaccg tatgttgcga tctcatagtg ttcgatcttc tgcgcagaaa tgatcaatgc
     2641 ggcatccctc gcaaatcccg ggtcatactc atcgatagct tcctttcctt cttcaaccaa
     2701 cccttccatc gcaggacact ttttacccgc tgcttttttg ccaagctgct caaacacctg
     2761 gtcaagccgt tcaacttgtt cttcggtctg ttgaagatgt tcatcaaaag ctgccctcag
     2821 atcttcgtcg tatgctgcct tgctcatttt aggcaatgct ttcgtcaaat atttttcagc
     2881 ccagtaaata tctttcagtg tttcttcaaa aacttttgca agatcttcct tgtttccgga
     2941 accattttgt tgctggcgtc caggtcgatt tcccgtagtc tttgtcttgc ttgatgcagt
     3001 tcttgttgaa gagcccgatg tttttttagg tgaatttttc atatgtgatt ttttattgtt
     3061 gaggatgatt caattcgaaa tgtcaatact aatttcatac cacttattgg tgtgcctgca
     3121 gcggtaaatg aatttaacat ccgtcgattt tttttgaaag aaaatcgctt actgaaaagt
     3181 tttgaaagtt taatgcggac tcaatcgttg cgcgcgccca cgtggttcga taaccgttaa
     3241 acgaattttt taagcgtaac caaacgacgc aaaaatatgg atccacatta gcagcaaaga
     3301 cgcaattgtt ctagtttgat tgcctgttaa acagatggta ataaatcgtg aacgaaagtt
     3361 tcttttccac tcacttaccc gtgtttaaga taattttgat tcgatgaaga aaaccatctt
     3421 ctatatttcg ctgctgtgct tttttccgat gtttttgaat gcacaggcga gaattctgca
     3481 gggtgaggtg ttagataaac aaagcgagga accaatacct tttgccgcaa taaaattttt
     3541 acgactgggc ggaggcgtgt taacggattc cgccggccgc ttcacattgc agttgaacaa
     3601 ttggccggct gcagacacgt tgcatattac cagcgttggt tatactcctc tcgatattcc
     3661 cgtagccaat ttcagagatt cgtctttcct tactatccat gttactctcc ttccaccgca
     3721 acatgaggtt gtcgtgaaaa cgaagtacaa ccgggcattg tggttttggc gaaagatcat
     3781 cgctcataaa ccacaaaacg ataaacacca ttttgacaat tatggatacg aggtgtacaa
     3841 taagctggaa ctcgacctcg ataaggtaaa taaagagaaa ctggcaaaca ctccgtttct
     3901 caaaccactt aggtttgtat tagactatac ggacaccact tctgaaaagg agccttacct
     3961 tcctgtttac ttgacggaaa gcctgtccga ttattatttt caaaaagatc cccgtagaac
     4021 gcgcgaagta ataaaggcaa ccataaccaa cggcatcgac aatgaaagcg tgataaggca
     4081 acttggtacg acttatcaaa acgtagatgt gtataacaac tcgatccccg tcttcgataa
     4141 aatgtatgtg ggacctttta gcgacaatgc ggataatttc tacaatttta aattgctcga
     4201 tacacaatat ctctctggca aacgcctcgt gcattttgca ttcacgccta aacatccggg
     4261 cggcgatatg tttaccggcg actgctggat acacgatacg agcttttcta ttcaaaagat
     4321 cacactcagg ccggcgttag atgcgaatat taattacatc acaggcttaa cactgataca
     4381 ggagttcaga ttgatatacg acaccgtttg gtttctgtat aaggataagt ttgttgcaga
     4441 tctttctttg ataggtagaa accacatcag ctttaaagca cgaaagactg caacgtataa
     4501 agatgttctt atcaacagcg attatgttac tgcgaacctc gattcgaata aatcaaacga
     4561 agaaattttg ctgcgcccca acgtgctcaa tcagccggat tctttttgga tacaacatcg
     4621 gcacgagcct ttaaataaag atgaacaaac cgtttacagg gtgctcgata cgctggagaa
     4681 aaataaaacc tacatccagt atcgcaacac attgaacttt ttgaccaccg gaaccaaaga
     4741 catagggaac gtacgaatag gtccatggta caactggata acagggaaca gttgggaagg
     4801 cacccggctt cgtttcgatc tgtccacaaa ccggcatttc agtgaccatg tttacctgca
     4861 tggctatctc gcgtacgggt ttaacgacgc taaattcaaa ggcaaggctg aagttaggta
     4921 ccagtttagc cgcgtaccgt ggagctatgt aaatctgtct tataaaaatg atcttgataa
     4981 tggccaggta tactatgacc aactcggcac tgataacatc attgcttttt tctttcgcaa
     5041 gccaaatatt ccacacaagt accagcagat cacagacaga aggctcgaat attattcaga
     5101 aacacataat ggatttggtt ttgggcttac ggcaagcagt cgccaatata aagcgttgct
     5161 taatttgccc ggcgatgaat tgtatcccgt taaagaggga aagccattta atacattcga
     5221 aacgattctt cgtttgcgat atgcctacca ggagcgaacc gtggatgaaa atttttcgag
     5281 aataagtttt ggtagcgact tccctatcat tgaactgcga tacacccacg gatggcccgg
     5341 agttttcaac agcagttaca aatacgataa actggacctg tccgtgtccg actatgtcaa
     5401 catagctccc tacggctccc tatattataa tttttttgga ggaaaggctt ttggcaccga
     5461 gccttaccag atgctaaata ttccgcctgg caacgactgg tatgtctaca gcaaatactc
     5521 ttttaatctc atgacgcgct ttcaatacct gactgatcaa tacgctggtt ttagcttcga
     5581 gcataacatc ggctctggca tattccggta cattaagcct acacggaaac taaagattcg
     5641 acagttctgg gaagttaaag gcctcgtcgg agatcttagc gatgcaaata agcaattgaa
     5701 ttttgtttcg gatacctctt tccaaacgct taataataaa atgtacctgg aaataggaac
     5761 aggcatcgat aacattctga aatttttccg cgtggacttt atctggcgcg tactgccgca
     5821 gcctctgccc gaaaatcacg tagaacggtt tggcgttttt gttggagcaa ggctttcgct
     5881 gtagatccac acaaaccgac ttttttttga atacatctcg tgaactcgcc aatgcttccg
     5941 acggctggtg aggccacggc aaataaaaaa gctccccgtt tgaggagctt tatactctac
     6001 aattgaacct ttagttcgca tgcactcctg gcggctctgc aaaagcaacc ttcacttcaa
     6061 ttggtgcagg cttaatattt tgatttaccc tgaacaggtt gttaggatcg tatttggctt
     6121 ttatcgccgc caacctttca taattatcgc cgtatgtggc ccggattctt tcttcacctt
     6181 catccatcat aaagttgacg taggcgccac ctgccgaatg cggatgcaat tcattaaagt
     6241 actctcttga ccagtttgtg atcgcctccc tgttcgcggg atccggatca atgcccacga
     6301 tcacctctgc ccaattagca tggcgataat tccagggcgt atcactattg ccaattcttg
     6361 atgctgctcc atttaccggg tacaaatgca tcgttgaaag cggcgtaggc attttgtttc
     6421 cgtgcttcac atgaagatcg atcgcctcgt cgctaagctc atttacaaaa tcagctttcc
     6481 aataccactg caagcccgga ggcatcaatg gatcaaacat agtttgtaag gccggtaacg
     6541 gcatcggtcc gcaccagtca agtgcagcgg ttttaaaatc gcgcattggc ttcaaagctg
     6601 cctctgattt ttctgcgggt ccggtgcaac accatactac gccgcacatt tttttgagat
     6661 gcagatgctc ggggaatggt gcaaaaggag gtacggtaag aaatgcaaag aagccgttta
     6721 cattttcggg ggcattcaaa ataaaatcac ggtaccaggt catcacttct tttgcctcag
     6781 aaatatcata aagtacagga cctccgtaga tcattcccgc gggattaagc ttgaacagga
     6841 aggaaacgac aacgccaaaa ttgccaccgc cgccgcgtaa tgcccaaaag agatccggat
     6901 tctcagtggc agaagctttc acatatgatc cgtctgccaa cactacactt gcctctaaca
     6961 ggttgtctat tgagagcccg tacttacgcg tgagatggcc aagtcctccg ccgagtgtta
     7021 ttccaccaac acccgtagta ccaaaaattc ctgagggcac agccatgcca atagcatttg
     7081 ttgcatggtc aacttctttt aataagcatc cgccctgcac caatgcagtt ttagcgacgg
     7141 gatctacatg aatacctttc atatgagaga ggtcgatcac cagtgcgcca tcggcaactc
     7201 cgaggccacc agcattgtgc ccgccgcctc gaaccgcaag taataatttg ttttctctcg
     7261 caaagtttac gcaggctatc acgtctgcaa catcagcgca ttgtgcgact gcgtcagggc
     7321 gtttgtcaat cattccattg tatactttcc gcgccgactc atattcttca tcagcaggtt
     7381 tgattagttt accacggagg tttgattgca attgatccaa ttgttcatta gtcatacggc
     7441 aagtttttta aatgaataat aaaacgattt aacggaattt agttagctcg ataagcaaga
     7501 agttcggaaa gttggtttct taaagatcgg ggaaaattgc aacagccaaa ttcgatggaa
     7561 aagccagtac taaaatctca ttttttcagc gagaataaag atacatgctt ttgtacccgg
     7621 tgcaaatatt tttttcaaag tgtgcgacta aatttctaac attaaccttt taatttaagt
     7681 tttcacattg atgttcacat tcatcactta aaatttttta acgggcaaca gttttgttcc
     7741 tttgcctgcg aaataatttt tcatgaagag tttgttactg gctttttcaa ttttgttcgt
     7801 catcagcgat gtaaccgcac aagcacttcc ggtcccaaga aattatcaaa aggcatacga
     7861 taaccacacc cggtcctcag acggaagacc cggtttacat tactggcaaa ataaagctgc
     7921 atacaaaatt gatgtaacgt ttgaaccggg cagcagaaaa atctccggga aggaaacaat
     7981 cgtttacaca aacggcagcc ccgacacact gggccagatc tggttcaagc tgtatccaaa
     8041 tgtttatcag aaaggatcag ccagaagttt ccgaatagat ccggaagatg ttagtgacgg
     8101 aatgcggatt gaaagcgtgg ccgttgacga taaaacccga agtaccgatg ctctgtccat
     8161 tgatggcact gaaatgtggc ttcctgttcc ggccgtattg cccggtaagc aaataaaatt
     8221 cgagctgtca ttttcatatg tgctgaataa aggctcgcac gagcgaaccg gcatgataga
     8281 cgacagctcc gcgttcattg catatttctt tccgcgcatt gctgtatatg atgacattga
     8341 cggctggaac aaaaatcctt atctgggcag ccaggaattt tataacgatt tctgtgattt
     8401 cgatgttcat atcacagtgc caaaaaacta tattgtttct gcgacgggaa atttgcaaaa
     8461 tgcgaacgac gtttatctac catctgtagt taaacgaatt gcaaccgctg aagccagcga
     8521 tggaattacg aggatcatcg atacaaccga caagcaggtc actgcgcaaa acgaaaccaa
     8581 cacctggaaa tttcaagcgg acaatgtgac cgattttgcc ttcgcaacga gcaaccatta
     8641 tatctggtat gcaagtagtc tcgtggttga tcctgccacg tcaagaagaa cccgggtgga
     8701 tgcggtgttt aaccctcatc acaaaagcta ttttgatgtg atcgattttg cccgaaagac
     8761 agtcgaagtg atgagttatc gctttcccgc atggccatac ccttaccctc acgaaacgat
     8821 ctttgacgga cttgaccaaa tggaataccc gatgatggtg aatgataatc cgctcgatga
     8881 gaaggccgat gcaattgaac ttactgacca cgagatcttt cacacgatgt ttccctttta
     8941 ccttggcatt aatgaaacta aatacgcgtg gatggacgag ggttgggcaa ctataggtga
     9001 gtggctaata tcgccgctca ttgactcaac gattgccgat gaatatggaa tgtattctta
     9061 caatgcggac gcagactatg atcttgacgc tccaataaca actttgagca cccagcaaaa
     9121 cggcgcgagt tattttctta atgcatatgc aaagccgggc atgggttatt tgtacgtgaa
     9181 agatatgctc ggtgacgaac tctttacaaa agcattgcat tattatatcg cgcaatggca
     9241 gggcaggcac ccgatacccc aggatttttt caattgcatc aacaccggca gcggcaaaaa
     9301 tttgaactgg ttttggaaga gctggttcta tgaccggggc gcaccagacc tggcgatatc
     9361 aaacgtgaaa aagacgggct ccagcatcac agttacaata aaaatgaagg gtagtaaacc
     9421 ggtaccggtt catcttactg tttattataa agatggtagt gagcaaaaat tacatcagag
     9481 cattgccgtt tgggagaaag cgaacaccgc gtcaataagt tttaccgcga caggtgcgat
     9541 tcaaaagatc gtgctcggcg agttacatga tgccgacatt gacagtagca acaacgtgta
     9601 tatcccgcat taagaattag gatttgagat ttgggatttg agatttgaaa tttgagattt
     9661 atgattttac tcccctcatt cttcgcttac ttcaatggct tcatcggtgg catttgcgat
     9721 tatcacattg ctcattttac gtaaagggtt gctgtgattt tcatcatacg cggcccggcg
     9781 gttaatgata tcaacacact caaaaattgc cgccaggaaa gatgatggat cggcttttcc
     9841 tttaccggcg atatccaatg cggttccatg atcagggctc gttcttacag ctggtaaacc
     9901 tgcggtgaaa tttacgccct caccaacggc cagcgatttg aaaggtatca agccctggtc
     9961 gtgatacatt gcgagcacgg cgtcaaaaga ttgaaactgt gcacgggcaa aaaaagcgtc
    10021 agcgctgtaa ggcccaaaaa caagaccgcc cttgtcttta cattccctta tcgccggttt
    10081 gatgatcgtt tgttcctcgt tgcctatcag cccatcgtct cctgcatgcg ggttcaaacc
    10141 caggacagcg atgcgcggct tgtcaatccc aaaatctcgt ttgagactgc tatttaatat
    10201 gctgagcttg ctgataatat tttccttagt gatctcctgc gtgacgtctt ttaagggcac
    10261 atgttcagta acgacgccca cacgcatatt cgacgcagtc atcaacatga gcacatcctt
    10321 taatgcaaac atggatttca aaaatggtgt atgtcccgtg taagcaaagt ctgctgactg
    10381 aatatttttt ttatgaatgg gcgcggtaac gagtccatgt atctgaattt ctttcagtgc
    10441 ttttgccgct tgttgtaaag atatttttgc atacttgccg cctgtttcat tcaacagtcc
    10501 cgggttgatg ggcacttctt catcccaaca gttaaaaatg ttgacttgtt tttggcttat
    10561 cctcgaaaag tccctaaccg cctggtaagc gaaatttatt tcgggcaggg atttccggta
    10621 aaaattgatg cttttattgc ttgcaaaaat tacgggcgtg cattgctcaa aaattcgact
    10681 atcgctcagc gcttttataa taagttcaat gcctataccg ttcaggtcgc cgcaggtaaa
    10741 tccaatcaac ggcttttgct gttcgttccc catgtagaat gttgtttgcg gtaaaagtag
    10801 ggattatgtg gaaatgtccg gagtgcagaa gccgataaca ctacttgttt acctgtcaac
    10861 ttatcaactt gttaacctgt taactacatc gtcaaccaat acctttgctt tcatgcacta
    10921 cacgctgaaa aaatctctcg ggcagcattt tttgaaagat gaaaatgttt gccgaaaaat
    10981 tatttctgcg ctgggaaaac aaaaatttga aaggctgctc gaaatcggtc ccggcggtgg
    11041 tgcgcttaca aaattcctgc ttaatattga cggtatcgat tttaaggcaa tcgagttgga
    11101 cgaagaaaaa gttaattacc tctcaagggc ttatccggaa ttgaacggaa aattaatcca
    11161 tgaagatttc ctggaggcat ctgctccgtt cgaacaggag ttcattatta tcggcaactt
    11221 tccatacaac atttcatccc agatcctctt taaaatattg gaatggaaag aaaaagtacc
    11281 tgctgtcatc ggtatgtttc aaaaggaagt cgctcagcgc atcatatcaa aaccaaacag
    11341 caaaagctat ggcatattaa gcgtgctggt ccaggcgttc tatgatgtgc attatctttt
    11401 tgatgttccg ccttcatgct tcgtgccgcc tccgaaagta atgagtggtg tgattgaact
    11461 gaacattcgc agtgcgcctg tgcagccgaa aactgaaaaa gaattattta cgttagtgaa
    11521 gacggcattc aaccaacgaa gaaaaaaatt acgcaacgct gtacgttcat tgttcgacga
    11581 cgatattctt acagatgcga tcttcgataa acgtgcggaa cagttaagcg ttgaagattt
    11641 tgcaaacctt acattcaaga tgaaagaagt atgataaaaa agaaagcgat cgttacggcc
    11701 agggttcatt catatttaat tgacgagctg catttaaaag gatacgacgt atcgcacatt
    11761 cccgcggtta cttatgaaga gttacagtcc ttgatcgttg acgcgacggg actcgttgta
    11821 accacccggc tgaaagttga ccgaaacctg ttggaaaaaa cacggcagtt gaaatggatc
    11881 gcaaggttgg gaagcggcat ggaattgatc gatgtaccgt atgcagaaag caaaggcatc
    11941 gtttgcgtga gcagcccgga agggaaccgc aatgcagtag cagaacatgc gcttgggtta
    12001 ttattgaact tactgaacaa tattaccagc agctttgagg aagtgaagca gggaaaatgg
    12061 atacgcgaag cgaaccgcgg cgaggaactg agcggaaaaa ctgtaggcat ttatggttat
    12121 ggcaacacgg gttccgcatt tgcgaaattg ctcgaaccgt ttaattgcac cgtgctcgct
    12181 catgacaaat ataaattcgg gtttgcaaaa ggttatgtga gagaggccga gccggaccag
    12241 atcgcgcgtt acgcggacgt cataagtttg catctgcctc ttacagaaga aacgctgcat
    12301 tacgcgaatc agcacttttt tcagcagctg gaaaaaaaac cgatctttct caccacatgc
    12361 cggggcaaag tctcggacac atccgcaatc attgatgcgc tcgataatca gctcgtgcgt
    12421 gccgccggca ttgacgttct tgaaaacgaa aacctgtctg cttataacga gcacgagaaa
    12481 acacaattac aaaacctggc cgcgcgaaaa aatgttatca tcactccgca tattgccgga
    12541 tatagccacg aggctttcta caaaatggca aaaatagttt tggataagtt ggatgaaaag
    12601 cgatgcctgt aaatcaggca accgggaaac tgtttggtcg tagaaatcct ccggttactt
    12661 ttaagctttc tttttcattt ttaggcaaat gatttctata tttgtgttgt gcaacgctgc
    12721 atggaatgtg cggcgttgta ttttttttat ctcttttaaa acctgtgagt atgaacgatg
    12781 taatgtacgt ttcaaaagac gcgtttgaaa gaatgcggca ggagttgcaa cgaatgaaat
    12841 cagttgaccg gccggctgca tcccgcgcca ttgctgaggc ccgtgaaaaa ggcgatttga
    12901 aagaaaatgc ggaatacgat tctgcaaaag aagcacaggg aatgctagaa gcaaagatcg
    12961 ctttgcttga aagtcagatc gcaaattcca ggattgtgga tgaaagtgaa attgacacca
    13021 gtaaagtgtc catcttaacc agggtaacaa tcaccaatat cgcaacaaaa aaaaccgtga
    13081 cttaccagat cgttggtgaa aaagaagctg atcttaaagc aaacaagata tcaatttcat
    13141 cacctattgg gcagggattg cttggtaaac aaaaaggcga agtcgcagaa gtaagagctc
    13201 ctacgggtat catcaaattc aaagtggacg aaattacttt gtaaatactt cgacgcccga
    13261 atcatcgaag ctgcgatgca gcttttttat tttgatcgaa atagaaaatt tcccaatttc
    13321 ctcgttccaa aattcagatg accatgagca ttttttcgaa gatcatcgcc ggcgaaattc
    13381 cttcgtacaa aatcgctgaa gacgaaagat tctttgcttt cctcgacatc tttccactcg
    13441 ttgaaggcca tactttagtg gtaccaaaaa caaatgtgga caatatgttt gatcttggcg
    13501 atgaatatct cagctcgctt ttggtttttg ctaagccgat cgcaaaggcc atcgaacgat
    13561 cattcaactg caaccgctgc ggcatcgctg ttattggtct cgaagtgccg catgctcatc
    13621 ttcatcttgt tccaataaat tctgccgacg acttgaattt cacccgcgga aaaatgaagt
    13681 taagcgagca tcagctcgaa gaagcacaac aaaaaattat cgaaaagttg aacggctgat
    13741 ccgttaattg cgtgatcgat gtaacgcatg gtcccgcagt tacgcagctt ctatctcatt
    13801 ttagcgaact tagccggtcg ggattccggg aaagaaaatc tgcccagccg cgcaatggtt
    13861 ttttcttaac taatccatcg ctgaaagatg aataatgatg acaaaccgca acagcgagcg
    13921 catcgctcgc gtcgaaaaaa tgcggccgtt cctctaatgt cattagcctt tgcagcattt
    13981 tgaacacctg ttctttggtg gcattgccat tccccgtgat agattgcttc acgcgctttg
    14041 gcgagtattc tgataccggc agcgaggcct gcatcgctgc tgcaattgct acgccttgcg
    14101 cgcgaccgag tttaagcatg ctctgtacgt tttttccaaa gaacggcgcc tcgatcgcaa
    14161 acatcgtagg atggtataat gtaattagct cacatacttt tgaaaatatc atttccagcc
    14221 gccggtatgt atctctttcg ggcatcagtt ttaatacgtc catgctgact aactgaatgg
    14281 acttgccatt cacctcaaga acagcatatc ccataactac ggtccccgga tcgataccca
    14341 aaattgttgt gcgggatgga ttcattgttc cgtgaaaata ctattttgct tcggtaagcg
    14401 gaggccacac ttaggaaatg ctttacagct aaatggatat ttctgaataa acggttgaaa
    14461 atattattga attacgtgct gggcccggcc ttattcattg tactcggatt cgttatttac
    14521 ataaaagtaa agcatcaacc agaccttccc gggaaattgt cacttctaaa aaatacattt
    14581 tcaaatggtg gcatctggca ggctgtattg cttgttttac tagcctgcgc taattggggc
    14641 atcgaggccc gcaagtggca gttgctgatg cgaccggttg aaagagtaag ttttttaaca
    14701 tctattaagg cagtattatc ggggcttgct ttgtctttgt tcctaccgaa cggcctcggc
    14761 gaatatccgg cccgcgcact gtatatgcgg gaaggcaacc ggctccgttc cgtagcgtta
    14821 aatatcgcag gaagcatgag ccagttgatc gtcacactgg ttgctggtat tgggtctttg
    14881 atttatttac gttattacag ttggggaaca aatccggaaa tgcaggggat ctcggtcctt
    14941 tgggttgacg gagtgatatc gatgatagcg atgggaacgg tgttactgat ctttacttat
    15001 ttccgtttat catggctaac gatgctgttt gagaaaattc ccttcgtctt tcgttacaag
    15061 tactttattg aacaacttga gacattccat tggaaggagt taacaagaat tttaaatttg
    15121 tcttgtatac gttttgtcgt ttttatagtt caatatgtac tagtattgca cgtgttacgc
    15181 gtggagattg attttgcgga tgccgtatgc accacttgcg tattatttct tttactggcg
    15241 atcttgccaa caattccatt tgctgatgta ggtatacggg gcgaggcggg aaggcagtta
    15301 ttcggattgc tcaccgccga tgtgtttgga gttgttgtta caacgtcggt gatctggttt
    15361 gtcaacctca taatcccttc catagccgga agtttgtttt tgttgggcat aaaaattttt
    15421 aaaaagcagg aaaaaagtac aagcgcgtga gaaaattttt ttcaactgtg atgggctccc
    15481 tgatctatct taccctttct gccggcgatg atttttgcgg cacccggaac actgcgttcg
    15541 cgcctaacga agttttaacc cttaacgtat tctacaatgt gatcgggtta tacattaatg
    15601 caggaacggc ttcgttcaca acaaccctcg aaagatataa taaccggccc gtatatcacg
    15661 tggtaggtga aggccactcg aattctcatt atgattggat attcaaagta agagaccggt
    15721 atgaaagcta ctttgatacc gccacgctaa aaccggttaa gttcatccgt aatgtagatg
    15781 aaggcggcta cacaaaacgc gaagatgtta cgttcaatca acagaacaat actgcaacta
    15841 ccttaagcgg agtttttaaa gtacccaact gcgtgcagga tgtgctgagt gctatttact
    15901 atgcgcggaa tatcgatttc aacagatata aggtagacga taaaattcct ttttccatgt
    15961 ttcttgataa ccaggtgtac aacctttaca tccgttacat ggggaaagaa attataaaaa
    16021 cgcgatacgg gaaattcagg gcgattaggt tcaaaccatt gctcgtaaag gggactatgt
    16081 ttgagggtgg tgaaaaaatg gaagtgtggg taagtgatga tgcaaaccac attccgttac
    16141 gtgtggaaag cccgatcgtt gtcggcagcg ttaaagttga tatgatgcaa tatcgtaacc
    16201 ttcgctatcc tttgtcctca aagatcagtg ctcgatagct tccaatttat tcccggcctt
    16261 taataactta tgttcaagaa gatattcggc gatttgaact gcattcgtag cagcgccttt
    16321 cctaagattg tcgctaacga tccataagtt caacgtgttc gcttgtgttt cgtctcttct
    16381 tatcctgccg acaaatactt catctttttc gtgtgcccac aaaggcatcg ggtaaagctg
    16441 ctgagacgga tcgtcctgta cgacaacgcc gggcgcttcg cgcaacagtt gtttcacttc
    16501 attgacatca aaatcattat caaattcaac gtttacactt tcgctgtggc caccgataac
    16561 cggaattcga accgttgtcg cagtcacgcg aatatcatcg tcgcgcatga tcttctttgt
    16621 ttcgtgcacc attttcattt cctcttttga ataaccattt tcaagaaaaa cgtctatctg
    16681 cggaattgca ttcaggtcga tctggtattt ataagccatc ggaccatcgt tgatcccgtc
    16741 acgctcattg aataactgat caaccgcctt cttgccggtg ccactcacac tttgataagt
    16801 gctgacaaca attcttttta ttttatatct cttatgcagt ggattcaatg caaccaccat
    16861 ttgaatcgta gagcagttag gattagcgat gatcttatca tcttctgtca acacatctgc
    16921 gttcaactcc ggtaccacca gtttttttgt cgggtccata cgccatgcac ttgaattgtc
    16981 tatcaccgtg attccagctg ctgcaaattt tggagccaat tccaaagagg tgcttccgcc
    17041 ggcggaaaac aatgcaacag ccggtcttgc tgcaatcgca tcgtcggcag aaacaacttt
    17101 ataggtgctg cccttgaacg acacgtcttt gccaaccgaa cgttcgctgg ccaccggtat
    17161 caattccgtt accgggaaat ttctttcttc caggatttgt aacatttttg aaccaactaa
    17221 accagtggct cctactactg caactttcat aaaagacatc caaaggcgga tgaaccagtt
    17281 ttaatgaata aatgttataa taatttcgta acaaaaaagc cttccgtttt gtggaaggct
    17341 ttcagttata ttcttgaaca tacaaactat gcaccttccg tgttaacgaa gatctttgta
    17401 cactttgtat gtttcttttg tttcattgat gcgcgaaagt acccacgaaa agttattacg
    17461 caaaaaatta tttcaccaga tctttatgcg tgcactatcg ggcctataca tcttatcacc
    17521 cggctgcaca ttaaatgcgg tgtaaaaagg actacagttc atcaaggcac cattaacacg
    17581 ccacatcgat ggcgaatgct gattggtgtt gatgatcgtg cgcatgagtt cgtctttcat
    17641 tcttattttc caaatttgtg caaaggataa aaagaaacgc tgatcaggcg tgagcccgtc
    17701 tatctttgtt gtgtcctgtc cttgcttggt taacttgaac gcgtcgtatg caatagcaag
    17761 cccgcctatg tcggcaatat tttctccgtt cgtgagtgcc ccgttaatat gcagactatc
    17821 aagaaccgta aacgtattat agagatcaat aactgatttt gtttttgcag cgaatttttc
    17881 gctgtcctct ttgctccacc aatttttgag attgccgtct ttatcatatt gtgccccctg
    17941 gtcatcaaaa ccatgagtca tttcgtgacc aatgcccgca ccgataccgc catagttaac
    18001 ggcatcatca gcgtttgcgt cgaaaaacgg cgactgcaaa atgcccgcag gaaaaacaac
    18061 ttcattaaaa taaggattat agtacgcgtt tatggttggt ggcgttaagc cccattcggt
    18121 acgatcaaca ggtttgccca ccttcgcaac ctggtactca taattattta tatcagctga
    18181 cacacggttc tcgaaatatt tgctgcgatc gatggtcact ttgctgtagt ctcgccattt
    18241 gtcaggataa cctatctttt ttatgaacgc gttcaatttc tcttttgcct ttgctttcgt
    18301 actgtcgctc atccagtcca aatgatcgat tcgtgctgca aaggcttttt gcagattgtc
    18361 gacgagttca agcatgcgtg ctttcgacga ttcgggaaaa tatttcttta catacaattc
    18421 gccgagtgca tcgccaagat gaccgtcggt ggaacttacg atccgttccc agcgtggctt
    18481 gatttcggat tgcccggtta ttgttttctc ataatcgaaa tctgcgttct caaattcatc
    18541 gctgaggacg tttacataag ccgctatcgt ttgaaaacgc aggtatgctt tccattgatc
    18601 aacagacgca tttcttagca gctcatttgt tttctgataa aattcaggtt gctgaacatt
    18661 tactgaatca gtatgaattc ccatttgatt caaagtggat gtccaggcga atgcgggcat
    18721 ctccttgtcg agttgagcaa cgagcatttt atgataattg gtctgcggat cacgcaatgc
    18781 aacatttgtt ttgtggcttc ctgccatttt cgtttcaagg tcgtacacca tggaaacttt
    18841 ttttgccgcc ctaaccgagt catcacccgt aagcgtaaaa agtttttcga tgtacttctt
    18901 atacgctgac acaacagcca ttgttgccgg gtcacttcga aaataataat ccctgtcggg
    18961 aagcccgatg ccgccctgca taaaggcggc aatattcatc gcgctgtttt tatcatcagg
    19021 gatgacgcca aacataaata acagatttac gttctgtgcc tgcatctccg ccacatactt
    19081 cattatttct gccggcgttt tgattgaatc gatcctggcg agatacggct tcacggggtc
    19141 gtaacctctt ttctccaggg ttgcagtgtc cagtcccgat acataaaaat cgccgacctt
    19201 ttgttctatg ctgcccgcag cctgcttacc atcagaaaca gattgcagga ttgtttgtag
    19261 ctgatcacgc gttctttttt ctaaatcgaa aaaggaacca acgcccattt cggtcgacgg
    19321 gatcttcacc gtgtcatacc atttaccaac agcataaaga aaaaagttat cgccaggttt
    19381 caaacttgaa tcgagaccac gggtatcaat gtattgctga gcgacgtatt ccttttttcc
    19441 attacaggaa atgataacgc aggcggtcaa agaaaccata ccgaataaaa atctatgttt
    19501 catttaaatt ttttgaaggg cgtaaaatag agcttttgaa tttaatcagt cggctatttt
    19561 ggcacagtgt ttattttctt attctttcgt tcatcaataa tgtggccgct acgagtccgg
    19621 cagtttccga ccgcagcctt gtattaccaa ggctgacagg gataaagttt ttctctgtag
    19681 ctgcctgtat ttctctgcgc gaaaaatccc cttcaggtcc gatgagaatg catacgttgt
    19741 taacgattct ggccatgtcc gcaatatttt cctttttctc ttctgcacaa tgcgcaatca
    19801 gtttcaaacc gggagacgcg ctatcgatcg cgtcatcgaa tttttctggt tgacgtaatt
    19861 cacataacca tgtttgcctg ctttgaagca tggcggagat cagaatattg ttcatccttt
    19921 cataccgaaa attttctttc tctgtgtgtt cgcaaatgag cggtattatt tcagcgactc
    19981 ctatctctgc agctttttct aagaaccatt caaagcgaga gggatttttg aggagtgaga
    20041 tcgctatgca aacttttttt gttccaggtg cagaatcaac atgcccccgc aaattatcga
    20101 caacaacctt gcaatgcttt ttattcgcgt cagagatggt ggcaaaaaaa agattgcctt
    20161 tgccatctgt caactgcaat tgttcggcgt tcttcatccg cagaacttgc acacaatgcc
    20221 tgcttgtttc ttcagtgagg gtgtgcaccg gcccctggat attttcttcg tagaagtatg
    20281 ggagattcat caaagattaa agtaagatga ttttctaatt gtcgtgttac cgtgcatgtc
    20341 aatcaaaaat aaagtcaaaa aaccggtgtc agttttttca acctctgtcc tgcatgctga
    20401 tcatgcgacg gaataaaaat cacatttcgt ccctttgaaa acgccttcac tttggtataa
    20461 gtatcctgcg ccagcgcatg ttttgcattt gtgccggaat atcgttcatt aaccaactgg
    20521 tcctgcgaat aacaaatatc tgccccaaaa aaaatgcaag cttcgtcgca atcaacgatg
    20581 acagagcaat gcccgtatgt gtgcccgggc gtttgtacaa aaaccatttc tttacccggc
    20641 gtcaaataaa atgcgcgatc gaaaacatcg taccggtcat ttaaatccac gagtgttggt
    20701 ttgaaccatg aaggatatag ttttggcaga tctccgaaag gtttgtccca ttcaaacttg
    20761 ttgacaagga tcttagtgtt tggaaaatat cttagcccgt cgatatggtc gaggtgaagg
    20821 tgtgttaaaa taacagaggt gatgtcagca tttttgatcc cgagttttcc gagctgaggg
    20881 cccacttctt cctctggttt cacatcgaat ttgaattgag tcgtgtcaaa ccagtttgca
    20941 aacaaaccgg atgacttaaa atagccagga ttattaacgt cggcgttctc gcccgtatcg
    21001 atcacaaaaa ctccggccgg atgctcaatg atcatcaccc atatcggcat ccattcggtg
    21061 aagtttttgt cgagcatgaa atcgatcatg gcccaaacac ccgtcttcct ggcatcgcgg
    21121 aattttgttt tgacggatac ggctcccgtt gaaatgagat gaatttttac aggcctgccg
    21181 tttttatgca gctccactga aacagctgga aacatctgct aaaattaaga aaggaaaatt
    21241 tttagagggg gatagacttc cctctttcac tcaacaacac gaccagacga aaacattaaa
    21301 atggattttc ttcttccaaa ccttcgtcaa attcgccgtt gttcatccgg cttcctttct
    21361 gaatgaataa gcgggcattg tcgtctccgc ccgtcttacc tggcggcgga tttaatggtt
    21421 tccattggct gccgagagga tttgcgccgg tgtctccatc ccactcttcg aatcgctgga
    21481 tatgtagtaa agcacgcagt ttgatatttt cgagcgaccc gtttctgtgc ttggcaattt
    21541 ttaagtgcgt ttcgccgcgg gtgctttcgc ccatttcatt
//
LOCUS       DASQJI010000735         6908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_260078,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000735 DASQJI010000000
VERSION     DASQJI010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6908
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260078"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..934
                     /locus_tag="VEV83_19640"
     CDS             98..934
                     /locus_tag="VEV83_19640"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HYK47404.1"
                     /translation="MTHSEKAEIFHSLHHSGKLLILPNIWDPLGALLLESLGYQAVAT
                     ASAAVALSQGYDDGENIPIDRVFDNLQRITSTVDIPVTTDFETGYADDERDLYENIKA
                     LLQTGVAGINIEDTSKKTRVFLPIETQCNKIRIIKRAADDAGMSLFVNARTDVMIRPN
                     LFTAEDSRMEEIIKRAKAYKDAGADCFFPIALKDKLQIEALLAKIKMPVNLIAVPGIP
                     SLNELQDMGVARLSLGPSFLKIAVKAMKDLATQLKDFDGLKAVLENDVTTDYLKRLVN
                     KS"
     gene            complement(990..2702)
                     /locus_tag="VEV83_19645"
     CDS             complement(990..2702)
                     /locus_tag="VEV83_19645"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK47405.1"
                     /translation="MTKYFPLTVYCLLASNLLWAQRHDNFTHADTLRGSITKERAWWD
                     VLTYDITVKPDFKSKTITGKNSIKYAILRPRDTVMQIDLQYPLVIDSVIQHDRRIDFR
                     KIDSNVWFVRTLPGTIKVASTAATGSVLNNPDSLTVYYHGKPREAFNPPWDGGWIWKS
                     DNLGRPWMSVACQGLGASVWYPCKDHQSDEPDKGASLSIIVPDTLVAVANGRLISQES
                     SNDGTTTWKWIVKNPINNYNIIPYIGKYVNWSDTLHGEKGTLDLNYWVLDYNIDTAKR
                     QFRQAKPMLRSLEYWFGPYPFYEDGYKLVESPHLGMEHQSAVAYGNGFHNGYRNHSGW
                     IDLSATGWGFKWDFIIEHESAHEWYGNNITSKDVADMWIHESFANYSETLYTEYLYGK
                     EAGNEYNYGIRKRIRNNVPIIAHYGVNEESNSLDMYYKGGNMLQTVRHVINDDTKWRN
                     ILRGLNKTFYHQTVTTQQVENYITKSSGVDLTRTFDQYLRNTTIPVLEYYYSADKKQV
                     FYRWDSCVSGFNMPLVLMYEGKSLRIYPTEKWKQLSDVSFFDPSQIDKNYYIHLKQVQ
                     REHL"
     gene            complement(2822..3904)
                     /gene="recF"
                     /locus_tag="VEV83_19650"
     CDS             complement(2822..3904)
                     /gene="recF"
                     /locus_tag="VEV83_19650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218293.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HYK47406.1"
                     /translation="MFACRQLTLTHFRNYSFQRFAFTQNIVGIFGRNGSGKTNLLDAV
                     YYLCFTKSSFSRPDVQSVKNGCAGFRIEGAFEKNEISEKLICILRENGRKEFSINETS
                     YHRFSDHIGKFPCVMIAPDDVTLITEGSEERRKFIDTLLSQLQHDYLEQLIGYNKVLQ
                     QRNSFLKFASERSEWDDSLLDILNKQLVEKGDFIHRRRLAFLEMFLPAVLQQYISIAS
                     HDDMLVLKYDSQLMNVSFEELLHQNFQRDLYLQRTGCGIHKDDLDIRLNETPFKNVAS
                     QGQRKSLLFAMKLAAFETLKDNKGFPPILLLDDVFEKLDEERMHNLLGYVCLNTNAHV
                     FITDTHEERLQQAFMKIGKDFQLIGL"
     gene            4078..4761
                     /locus_tag="VEV83_19655"
     CDS             4078..4761
                     /locus_tag="VEV83_19655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HYK47407.1"
                     /translation="MGFLLQVDSTNLINTAAQQTAQTINLWSLLNKGGWIMYPLYLLL
                     AAAIFVFFERLIAIRKASRIDPNFMNIIRDNIITGNVTAARNLARNTDNPVARIIDKG
                     IQRIGKPIDAIEKSMENVGRLEMYKMERNLNILSLIAGIAPMFGFLGTIVGMITLFYE
                     INSTGNFELGTIAGGIYVKMITSATGLIIGVIAYVGYNYLSTQVDKTANKMEASSSEF
                     IDVLQEPTR"
     gene            4834..5232
                     /locus_tag="VEV83_19660"
     CDS             4834..5232
                     /locus_tag="VEV83_19660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYK47408.1"
                     /translation="MNIRRKLRAHPQVHTGALNDILFILLLFFLIVSTLANPNVIKVN
                     NPKGTKDTKAKQTIVVSIDKEQNIYIGQHQIDPASLDSLLKYEVLRKKPFVDTPSVVI
                     NADTVSYYGEVFRVMQAAKRAGARVVANVK"
     gene            complement(5281..6687)
                     /gene="mgtE"
                     /locus_tag="VEV83_19665"
     CDS             complement(5281..6687)
                     /gene="mgtE"
                     /locus_tag="VEV83_19665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HYK47409.1"
                     /translation="MSFELEQLSIKEQFEQLMQENDLQAIRRFLDDQNISDVADLIYD
                     HPDYEAQIIANMAINRASKVFKILDLSTQKQIVQELPSFKTAELLNDLPADDRTDFLE
                     ELPKEAIRDLIKQLNPEERKVTLSLLGYPEDSVGRLMTPDYVYVHPYNTVEQALSTIR
                     KVAKNSETIDVIYVLDKNGELIDDLRIRDIILASPDKKIDELMDGRVVALNVNDDQEH
                     ASEIFKMNNRVALPVTDDNNILLGIVTIDDMLWVANEEFSEDIQKIGGTEALNQPYLD
                     MPLLKLIKKRVGWLIILFVGEMLTATAMAYFSDEIKKAVVLSIFVPLIMSSGGNSGSQ
                     ASTLIIQALAVGDVALSDWWRVMRREIFSGLMLGSVLGLIGLIRVVIWHMLMAHGIIE
                     DLYGPYWLLIGLSVGFSLIGVVLWGTLSGSMLPIILKRLGADPAVSSAPFVATLVDVT
                     GLVIYFSIAYIFLEGLLL"
BASE COUNT         1920 a         1563 c         1482 g         1943 t
ORIGIN      
        1 aagcaaaaca caggttcaaa cggtcgcttg cgaaaaaatc gaatcgacta attttgtatt
       61 ggcaaaattt tcacacgttt ccggatgatc tgtaaaaatg acacactccg aaaaagcaga
      121 gatttttcat agccttcacc atagcggaaa acttctaata cttccaaaca tttgggatcc
      181 gctcggtgcg ctgctcttag aaagcctcgg ctaccaggct gttgctacag ccagcgccgc
      241 cgtagctctt tcgcagggtt atgacgacgg agaaaacatc ccgatcgaca gagtcttcga
      301 caacctgcag cgaattacaa gcacggtcga tatccctgtg accactgact ttgaaaccgg
      361 ttatgccgat gacgaacggg atctctacga aaacataaaa gcgcttcttc aaacgggcgt
      421 tgctggaatc aatattgaag acacttctaa aaagacgcgc gtatttcttc caatagaaac
      481 gcaatgcaat aagatacgca tcataaaaag ggcagctgat gacgccggta tgtcgctctt
      541 cgtaaacgca agaaccgatg tgatgatacg cccgaacttg ttcactgcag aagattcgcg
      601 catggaagaa attataaaaa gggcaaaggc atataaggac gcgggggcgg attgtttttt
      661 cccgatagca ttgaaagata aattgcaaat cgaagcatta cttgctaaga tcaaaatgcc
      721 ggtcaatctg atagcagttc ccggaatacc atcattaaat gaattgcagg atatgggcgt
      781 tgccaggtta agcctgggac cgtcgttttt gaagatagcg gttaaagcaa tgaaggatct
      841 ggctacgcag ttgaaagatt ttgatggctt gaaagccgtc ctcgaaaatg atgtaacgac
      901 cgattatcta aaaaggctgg tgaacaaatc gtaaaaggat ccagccaatg agtgtcgcgc
      961 caagattaca aaatcatcga atgcaggtgc tacagatgtt ctctttgaac ctgcttaaga
     1021 tgtatgtaat aatttttatc gatctgcgac ggatcgaaga aggatacatc acttaattgt
     1081 ttccactttt ccgtgggata gatgcgcaag ctttttcctt catacatcag aaccagcggc
     1141 atattaaaac cggaaacaca actgtcccat cggtaaaaga cctgcttctt atcagcggaa
     1201 taataatact ccagtacagg gatcgttgtg ttacgtaaat attgatcaaa tgtcctggtg
     1261 aggtcaacgc ccgaactttt agtgatgtaa ttttctacct gctgtgtggt cactgtttgg
     1321 tggtagaatg ttttgttcag tccgcgcaag atgtttcgcc atttggtatc atcatttata
     1381 acatgacgaa ctgtttgcag catattaccg cctttgtaat acatgtcgag actgttgctt
     1441 tcttcgttca cgccgtaatg cgcgataatg ggcacgttgt tcctgattcg cttccgaata
     1501 ccataattat attcgttacc ggcctccttg ccatacaaat attcagtgta caatgtctcg
     1561 ctgtaatttg caaaactttc gtggatccac atatccgcta cgtcttttga agtgatgtta
     1621 tttccgtacc attcatgtgc gctttcatgc tcaatgataa aatcccattt gaatccccaa
     1681 cccgtagcag acaggtcgat ccaaccgctg tgattgcgat atccattatg aaaaccattc
     1741 ccatacgcta ctgcactttg atgctccatc ccaagatgcg gtgattcgac tagtttatat
     1801 ccatcttcat aaaaaggata tgggccaaac cagtattcga gcgaacgaag catcggtttc
     1861 gcctggcgga attgtcgctt cgcagtgtcg atgttgtagt cgagcaccca gtaattaaga
     1921 tcaagcgttc ctttttcgcc atgtaatgtg tcgctccagt tcacatattt cccgatatat
     1981 gggataatgt tgtaattgtt tatcgggttt tttacgatcc atttccatgt ggtggtccca
     2041 tcattgctgc tttcttgcga aataagcctt ccattggcaa cagcaactaa ggtatcagga
     2101 acaataatag agagtgatgc gcctttatcc ggctcgtcgc tttgatgatc tttacatgga
     2161 taccaaacac tcgcacccag cccctggcag gcaacgctca tccagggtct gccaaggttg
     2221 tcgcttttcc agatccaacc accatcccat ggcggattaa acgcttcgcg cggtttgccg
     2281 tgatagtaaa cagtaagcga gtcagggtta tttaacacgg accctgttgc tgccgttgac
     2341 gcgactttta ttgtacctgg aagcgttctt acgaaccaca cattagaatc aattttccta
     2401 aaatcgatgc ggcgatcatg ttgaataaca ctgtcgataa ctaatggata ttgcaggtcg
     2461 atctgcatga cggtatctct cgggcgcagg atcgcatact ttatgctatt ttttccggta
     2521 attgttttgg acttaaagtc aggctttacc gtgatatcat atgtcagcac atcccaccac
     2581 gcgcgctctt ttgtgatgct gccacgcaac gtgtccgcgt gcgtaaaatt atcgtgccgt
     2641 tgcgcccata atagatttga tgccagcagg caataaacgg tgagcggaaa atatttcgtc
     2701 atcgaatatg cttgattgat tttccgcgaa ggtgcgaaga ttgcaaacac tcagcacaca
     2761 ccagtcgctg tcgaaaaaat tactcttcgt gccttcacgt agctttgttg aaaacccaaa
     2821 attaaagtcc gatcaactga aagtccttac caatcttcat aaaagcttgt tgtaatcgtt
     2881 cctcgtgtgt atcggtaatg aaaacgtgcg cattggtatt aagacaaaca tacccgagca
     2941 aattgtgcat gcgctcttcg tcgagctttt caaaaacatc gtcgagcaaa agaatgggag
     3001 ggaagccttt attgtctttt aatgtctcaa aggctgccag cttcatcgca aacaaaagac
     3061 ttttccgttg cccctgcgaa gccacattct taaacggtgt ttcgttcaac cggatatcaa
     3121 gatcgtcttt gtgaatgccg caacctgttc gttgaaggta aagatcgcgc tgaaaatttt
     3181 ggtgcaacaa ctcttcaaat gacacgttca ttagttgact atcgtatttc aataccagca
     3241 tgtcgtcgtg agaggcaatc gatatatatt gttgcaggac agcgggcaaa aacatctcca
     3301 gaaaagctag ccttcgacgg tgaataaaat cgcccttttc aactaactgt ttgttcagga
     3361 tatccagtag cgagtcgtcc cactcacttc tctctgaagc aaattttaga aagctgtttc
     3421 gttgctgaag aaccttatta taacctatta gctgttcgag ataatcgtgt tgcagttgtg
     3481 aaagaagcgt atcgatgaat tttctccgtt cttcactgcc ctcggtaatg agcgttacat
     3541 cgtcgggagc gatcatgacg catggaaatt ttccgatatg atcggagaag cggtgatagg
     3601 atgtttcatt tattgaaaat tccttacgcc cattctcccg caagatgcaa atgagtttct
     3661 cgcttatttc attcttttca aaggctcctt ctatacgaaa accggcgcat ccgttcttta
     3721 cactttgtac atcagggcgg ctaaagctgc tttttgtaaa gcacaggtaa taaaccgcat
     3781 ccagcaaatt cgtttttccg cttccgttcc ttccgaaaat cccaacgata ttctgagtga
     3841 aagcgaaacg ctggaaacta taattgcgaa aatgcgtaag cgttagttgc ctgcatgcaa
     3901 acatgaaggc aatgtaagag ttttatccgt ctgacgcttt tgaaagcgtc tgacgtatcc
     3961 gtttcgaacc aactcctgca aaagctttct taaaatcaca tcgcagggta atttattcac
     4021 acgagaggcg ttgttttgtg gttgaacgta ttttagcaaa cattaaaatg ttaatgaatg
     4081 gggtttttgt tacaggtcga ttctactaat cttattaata cagccgcaca acaaactgct
     4141 caaaccatca atctttggag tttactgaat aaagggggat ggatcatgta tcctctctac
     4201 cttttgcttg ctgccgcaat ctttgttttt tttgaaagac tgatcgctat ccgaaaggca
     4261 tcaaggatcg atccgaactt catgaacatc atccgcgata atataatcac cgggaatgta
     4321 actgctgcgc gcaatcttgc ccgcaatact gataacccgg tcgcgcgtat catcgacaaa
     4381 ggcattcagc ggatcggtaa gccaatagat gcaattgaaa aaagtatgga aaatgtggga
     4441 cgcctcgaga tgtataaaat ggagcgtaac ctgaacattc tttcactgat agcaggtatt
     4501 gccccgatgt ttggattcct cggaacaatt gtgggtatga tcacattgtt ctacgagata
     4561 aacagcacgg gcaatttcga actcggcacc atcgccggcg gtatatacgt gaagatgatc
     4621 acatcggcca caggcttgat catcggtgtg atcgcatacg ttggctacaa ctatttaagc
     4681 acgcaggtag ataaaactgc caacaaaatg gaagcttcca gcagcgagtt tattgatgtt
     4741 ttgcaagaac ctacacgcta gctgtttgaa gtttgaggtt tgaggtttga agtaaatcgc
     4801 gtttgctaat ccaaattttt aaggaaaagg ttaatgaata taaggcgaaa attaagagct
     4861 cacccacagg tgcacactgg cgcattaaat gatattctgt tcatcctgtt gctctttttt
     4921 ttgatcgtat ctacacttgc gaatccaaat gtgatcaaag taaataatcc gaaaggtacc
     4981 aaggatacaa aagcgaagca aacgatcgtt gtgtcgattg ataaggagca aaacatttac
     5041 atcggccaac accagatcga tccggcttct ttggacagct tactcaaata tgaagttctt
     5101 cgcaaaaaac ctttcgtcga tactccttcc gtcgttatca acgctgacac cgtttcttat
     5161 tatggcgaag tatttcgcgt aatgcaggct gcaaaacgcg ccggtgcgag agttgtggcg
     5221 aatgtgaaat gaggaatgag gattcgggat ttaggattta ggaattagga attaagatcc
     5281 ttacaacaac aatccctcta agaaaatata cgcgatagaa aaataaatta ccagcccggt
     5341 tacgtccacc agcgttgcaa caaacggcgc agaagaaact gcaggatcgg cgcctaatct
     5401 ttttaatata atgggcagca tcgatccgga tagcgttccc cataggacaa cgccaatcaa
     5461 agagaatcca acgcttaagc caataagcaa ccaataaggc ccgtacagat cctcgattat
     5521 tccgtgcgcc attaacatgt gccagataac aacgcggatg aggccaataa gccccagcac
     5581 acttcccagc attaaaccgc tgaatatttc acgtcgcatc acgcgccacc agtcgctaag
     5641 cgctacgtcg cccactgcaa gcgcctgtat gatgagtgtg gaagcttgtg aaccactatt
     5701 gccgccgctg ctcatgataa gcggaacaaa gatcgacagt accactgcct tttttatctc
     5761 gtctgaaaaa tacgccatcg ccgttgccgt aagcatttct cccacgaaca aaatgatcag
     5821 ccagccaact cttttcttta tgagcttgag caacggcatg tcaagatacg gttggtttaa
     5881 ggcttcggta ccgcctatct tttgaatgtc ttcgctgaac tcttcgttcg caacccacaa
     5941 catatcgtcg atcgttacga tgccgagcaa aatattattg tcatccgtga caggcagagc
     6001 cacacggtta ttcattttaa atatttcact tgcatgctcc tggtcatcgt tcacatttaa
     6061 cgcaacaaca cggccatcca tcaactcatc gatctttttg tctggtgatg caagaatgat
     6121 gtctcttatt cgaagatcgt ctatcaattc accattctta tccagaacat agataacatc
     6181 gatcgtttcg ctgttcttgg ccactttgcg tattgtggac agtgcctgtt caaccgtgtt
     6241 gtacggatgc acgtacacat agtcaggcgt catcaaacgg ccaacgctgt cttccgggta
     6301 accaagcaac gaaagggtga ctttccgctc ctcgggattc aattgtttaa tgaggtcgcg
     6361 aatggcttct ttaggaagtt cttcgagaaa atctgtcctg tcatctgccg gcagatcgtt
     6421 caaaagttcc gcggttttga acgacggtag ctcctgtacg atttgttttt gtgtacttag
     6481 atctaatatt ttgaaaactt ttgaggcgcg gtttatcgcc atgttggcga tgatctgcgc
     6541 ttcataatcc ggatggtcgt aaatgagatc ggctacgtcg ctgatgtttt ggtcgtcaag
     6601 aaaccttcga atggcttgca ggtcgttttc ctgcatcagt tgttcaaact gttctttaat
     6661 ggaaagctgt tccaattcga agctcatgcg tgcaaattag caacattcaa tttaattttt
     6721 tgagttgctg cgcaaacagt aaaattgcgg ctaactttcc ggcgcacgat ttcattcaat
     6781 cgactttgct accgtcattc aagattcgct aatttttacg ttatgatctt acccgttgtt
     6841 acaatcgctc catcgctaaa aaggggacga ggagttttcg cgactgagga tatcaaggag
     6901 ggaacggt
//
LOCUS       DASQJI010000736         2821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1489148,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000736 DASQJI010000000
VERSION     DASQJI010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489148"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1467
                     /locus_tag="VEV83_19670"
     CDS             <1..1467
                     /locus_tag="VEV83_19670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="class I mannose-6-phosphate isomerase"
                     /protein_id="HYK47410.1"
                     /translation="ELRDFFDGLTIDSIQQEVNEAANTVIIIGQGASLIAPAADFLLY
                     ADMPRWEIQLRFRRNEIKNLGADNYDAEFSYQYKRSFFVDWRACDRHKKELMASWDYV
                     LDTTIAGTPKMISASVFSEALKTTVSRPFRVVPFFDPGPWGGQWLKEVCDLDRDQQNF
                     AWGFDCVPEENSLLFDFDDVLFETPAINLVFAQPKKLLGKKVYEAFGAEFPIRFDFLD
                     TIDGGNLSLQVHPLKEYIREKFGMAYTQDESYYILDARENAFVYLGLKEHIVPEKMLH
                     ELQAVQEDGGDFDAEKYVEKWLIKKHDHILIPAGTVHCSGADTVVLEISATPYIFTFK
                     LWDWGRMGLDGKPRPISLEHGKQVIQWDRTTKWTEKNIINQIEPVAQGDGWCEERTGL
                     DATSFIETRRHWFTGKVEHNTNGVVNVLNLIEGREAIIESPVNAFEPYVVHYAETFIV
                     PAAVGGYTIRPFGESDGKQCATIKAFVRTENLVDYRIN"
     gene            1472..>2821
                     /locus_tag="VEV83_19675"
     CDS             1472..>2821
                     /locus_tag="VEV83_19675"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HYK47411.1"
                     /translation="MENQGNKWYVYKATIVAAVGGLLFGYDTAVVAGAIGFIEKLYNL
                     SPTMKGWIASCALIGCVIGAIFAGSLSDRIGRKKVLVLSGIMFAVSSIGITIPLSLTW
                     FVIFRLIGGIGIGVASILAPMYIAEIAPANIRGRLVSVNQLGIVSGILLIYFVNAAIA
                     GWHDEAWNIAIGWRWMFGSGAIPSVVFLAMLFFVPESPRWLASKERWKEADKILSKVN
                     GKEKARQELAEIKETLDIEKGSFSEIFKPGIRKALVIGVVLCIFSQVTGINAIMYYAP
                     EIFKSTGDATSSALLQTVLVGIINVLFTLVAIKYVDKWGRRFLLLLGIAGMAFCLTIT
                     GAAFYFDLAKGYLVLIAILAYIACFAVSLGPLAFVVIAEIFSNRNRGKAMSVAIFFLW
                     TSVFVVSQSFPMLLDSIGSAFTFWIYMTMAIFAFIFVYRLVPETKGKSLEEIEKYFMH
                     "
BASE COUNT          753 a          550 c          734 g          784 t
ORIGIN      
        1 gaattaagag acttttttga tggattaacg atcgattcaa ttcagcagga agttaacgaa
       61 gccgcgaaca cggttatcat tatcgggcaa ggtgcttcgc tgatcgcacc agcggccgac
      121 ttcttgttat atgctgatat gccgcgctgg gaaatccaac tgcgtttcag gaggaatgaa
      181 atcaagaatc ttggcgccga taattatgac gcagaattct catatcaata taagcgtagt
      241 ttttttgttg actggcgcgc atgcgacagg cacaaaaaag aattgatggc gagctgggat
      301 tatgtgctgg acacaacaat tgcgggaaca ccaaaaatga tctcagccag cgtattctct
      361 gaggcactga aaacaacggt gagcaggccg ttcagggtgg ttccattttt tgatccgggc
      421 ccctggggcg gtcagtggtt gaaagaagtt tgcgacctcg acagggacca acaaaatttc
      481 gcatggggtt ttgattgtgt tccggaagaa aacagtttgc tgttcgactt tgatgatgtg
      541 ttgtttgaaa ctcctgctat taatcttgtc ttcgcgcaac cgaaaaaatt gttaggcaaa
      601 aaagtatatg aagcattcgg cgccgagttt cccatccgtt ttgatttctt agatacgata
      661 gacggcggca acctgagttt gcaagtgcat ccgctaaagg aatatatccg cgaaaaattc
      721 ggaatggcct acacgcagga tgaaagttat tatatcctcg atgcgaggga aaacgctttt
      781 gtgtatctcg ggcttaaaga gcatatcgtt cccgaaaaaa tgttgcatga actacaggcg
      841 gtgcaggaag atggaggcga ctttgatgca gaaaagtacg tggagaaatg gctgatcaag
      901 aagcatgatc acattcttat tcctgccggc acggtgcatt gttcaggagc tgatacggta
      961 gtgcttgaga tcagtgcaac gccctacatc ttcaccttta aattgtggga ttggggaaga
     1021 atgggccttg acggaaagcc gcgacctatc tctctggagc atggcaaaca agtgatacag
     1081 tgggacagga caacaaaatg gacggagaaa aatattatca atcaaattga acccgttgca
     1141 caaggagatg gttggtgtga agaaagaacc ggcctcgatg ccacatcatt tatagaaacg
     1201 cggcgtcatt ggtttactgg aaaagtggag cataatacga atggcgtggt aaatgttttg
     1261 aatttgatcg aaggaagaga agctatcatc gagagtcccg tgaatgcatt cgaaccgtat
     1321 gttgttcatt atgcagagac ttttattgtg cccgccgcag taggtggata tacgattcgc
     1381 ccgtttggtg aaagcgacgg caagcaatgt gcgaccatca aagcttttgt aagaaccgaa
     1441 aatcttgtcg attaccgaat caattaaacg catggaaaac cagggaaata aatggtacgt
     1501 gtataaagca acgatcgttg cggcagtcgg cggattgtta tttggctatg ataccgctgt
     1561 tgtagcggga gccattgggt ttatcgaaaa actttacaac ctgtccccta cgatgaaagg
     1621 ttggatcgct tcctgtgcgc tcatcggctg tgtgatcggc gcaatattcg caggatcgct
     1681 gagcgacagg atcggcagaa aaaaagtttt ggtgttatcg gggatcatgt ttgccgtgtc
     1741 atcaattgga ataacgatcc cgcttagttt gacgtggttt gtaatttttc gtttgatcgg
     1801 cggcatcggc ataggcgtcg cttcgatcct ggctccaatg tatatcgcag agatcgcacc
     1861 cgcgaacatt cgcggaagat tggtttcggt gaaccagctt ggaattgtgt caggcatttt
     1921 gctcatctat tttgtaaacg ccgcgatcgc aggctggcat gatgaagcct ggaatatagc
     1981 aataggctgg cgttggatgt ttggttcagg tgctattcct tcagttgttt tcctcgcaat
     2041 gttgtttttt gttcccgaaa gtccgcgatg gcttgcatct aaagaaagat ggaaggaagc
     2101 cgataaaatt ctttcaaaag tgaatggaaa agaaaaggcc aggcaggagc tcgcagaaat
     2161 aaaagaaacg ctcgacatcg aaaaaggaag tttctctgaa atttttaaac ccggtattcg
     2221 caaggcgctg gtgattggtg tggtgctttg catattctcc caggtgacgg gcatcaacgc
     2281 gatcatgtac tatgcgcccg aaatttttaa atcaacaggc gacgccacaa gttctgcatt
     2341 actgcagacc gtgctggttg gtatcattaa tgttttgttt acgctggtgg cgataaaata
     2401 tgttgacaaa tggggaagaa gatttttatt attgctcggc atcgcaggca tggcgttttg
     2461 cctcactata accggtgccg cattttattt tgacctggca aagggctatc tggtgctgat
     2521 cgcgatcctt gcatacatcg catgctttgc ggtatcgctt gggccattgg cttttgtggt
     2581 tatcgcggaa attttttcaa acaggaatcg tggaaaggca atgtctgttg ctatattttt
     2641 tttgtggaca tcggtgtttg ttgtttccca atctttccct atgctgctcg attctattgg
     2701 aagcgcattc acattctgga tatatatgac gatggccatt tttgctttca tttttgttta
     2761 caggcttgtg ccggagacaa aaggaaaatc gcttgaagag atcgaaaagt atttcatgca
     2821 t
//
LOCUS       DASQJI010000737        11066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3023409,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000737 DASQJI010000000
VERSION     DASQJI010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11066
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3023409"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(331..2724)
                     /locus_tag="VEV83_19680"
     CDS             complement(331..2724)
                     /locus_tag="VEV83_19680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HYK47412.1"
                     /translation="MDNFAAAPETSGGMLSYEDFRLEVVSDYRLAFESRETSFLGRKE
                     VLTGKAKFGIFGDGKEVAQVALAKFFQPGDFRSGYYRDQTLMFGAGIGTIQQFFAQLY
                     ADPDVNHDPFSAGRQMVSHFVTANTDEDGNWKDLVNQKNVAADLAPTASQMPRSLGLA
                     LASKLFRNSEVLKPFTDLSNNGNEICICTIGDASTSEGHFWETINAAGVLQIPLAVFV
                     WDDGYGISVSKDYQTTKGSISVALKGMQKKPDTNGIDIYTVKGWDYAGMCEVFETALK
                     KVRETHVPAVFHVEELTQPQGHSTSGSHERYKTPERLQWERDWDCLKKMREWVIENGI
                     ATADELNKLEEDARAEVLQSRNNAWKEYLEPIKAQALKAVELMRSSVVNDMDVYNKLQ
                     SLSKQLEANREPLRRDVMKALAMAVYATKNYPGNKELVDYFAELRSLNAGLYNSYTYS
                     DHRKSAVNVQAKAAQYADDAPVMNGYEILNRYFDQLFSAEPRLLAFGEDVGMIGDVNQ
                     AFAGLQIKHGENRIFDTGIRELTIVGQGIGLALRGLRPIAEIQYLDYLVYGLQPLTDD
                     LATLQFRTKGLQHCPLIVRTRGHRLEGIWHSGSPMGVIINALRGIYVCVPRNMVQAAG
                     MYNTLLRSNDPGLVIECLNGYRLKEKLPSNLLEFTVPMGIPEVLKQGNDVTIVSYGST
                     LRIIMDAVARLEEKGISCEVIDVQTLLPFDIHQSIVESLKKTSRIVFVDEDVPGGGAA
                     YMFNKILEEQQGYKWLDAAPRTITAKEHRPAYGSDGDYFSKPNAEDIFDTIAELAAE"
     gene            complement(2812..7578)
                     /locus_tag="VEV83_19685"
     CDS             complement(2812..7578)
                     /locus_tag="VEV83_19685"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HYK47413.1"
                     /translation="MLRKILKISLRVLAGLLALILLVWLLIQTEPVQNFIVSKIANKL
                     SKDLHTTVKIGHVDLSLFDRMDLDNTLILDQSKDTLLKAGSLKLRITDWFFFKQNIEL
                     KYIGLEDAVIKQQRTDSLWNYQFIIDHFSSAQQSKKQSKKIVLQIQKIDLKNVVYVKN
                     DQWNGQKLTIRTGSLLLDAENIDLSKNLILIKSIDMDKTYFNIENYTGNNPVTDRTNN
                     DSVLHLNPSNMRLQIASIKITDGTFGSGLRGEIPLKDRFDGKHIEISKINGSVNNLRF
                     INDTLKASVNLSAVERSGLQLKHLQTDFRLTPQIMEFAKLNFKTGRSTLGNYYAMHFK
                     HFNYDMSNYVQKVVMNADFRNGVINTNDLAFFAPSLNTWNERFLINGKFNGTVSHFKV
                     ENIFLSNGSNTYASGDLEMQGLPEISKTTITLNNANVQTNSREVSFLYPKISNIKTPD
                     LAALGNTHFVGNFSGTPSTLKAKGTLASALGGMYTDLSLSFPKNAEPVYSGSVETQQF
                     NLGKFLAIPNLGNVSFKGEVEGKSFQLDKVATRVNGNFSALAYKDYTYTNLAFNGEIK
                     QKNFKGDFTADDPNFNFTSTIVVDLNQSAPSFNVLGDLGLVNLKALGFTKDSVSITGL
                     FDLNFQGHNIDDFLGYAKILNATVVHNSQRLDFDSLAVTAALDSAGKKLTIGSNEFLV
                     SVEGQYSILELPQSFQSFLNHYYPSYINPPRTQLSNQNFTATISTGQFERYARLLDSN
                     FSGFNNAFLSGRISTREGNRFNLDVKIASAKYKHYSLEDAFITGDGNNDSLLLTGNIG
                     KIYLSDSMYFPNTKISISSSNDLSHVQVATSANTTLNDAQLEADVRTMPDGVAINFRP
                     SSFVLNDKKWNLQNQGEVVVTKNFASAKNMKFTQGFQEISVESVEEEGGTANTLAVRL
                     KDVNLGDIIPLFVQRPLMEGIANGTIYLRDIYTKLRVEAEIKASQFRLNNDSIGVVNI
                     NSKYNTAEGKVLFKIGSNNQNFVLNAEGTYNTKDSTHNPLETTMKLDHAKVGFLNSFL
                     GNLFGDITGLATGSINLHGDFKDLHLVGAAHLDSGALTVKYTQVRYLIPSADFVFKED
                     GIDFGTFEIKDKFGNTGNVRGRLFENGFKENRFDFDLSTDKLLLIDTKAKDNDNFYGT
                     AIGRGSLTLKGPQENMRMTITAEANDFSHVYIPTSTSKKSADADFIVFKQYGLQVQPE
                     TENTTHLNIDLTLTATNYVTISVILDELTGDVIEATGNGRLLIKVPAQGDITMNGRYN
                     IDNGNYNFNFQSLVKKPFELLPEQNSYIEWTGDPFDANIKIRARYTAKNVAISDLISQ
                     STLNLNPAVQGYRGDVYVIADLTGKLTKPDINFSLDFPQGSAIRNDDNFNRLLAKMQT
                     DENEMLKQVTWLIVFDAFSPYGEISGNQAFIQSTAYNTISQKVAGVLNNAISDFLYKL
                     TGDKTLQFDIGAKTYSSYNLGGISTGSTLNRGAVELKLNKSLFNNKVIVTFGGDLDFN
                     VSGAAVAASNNNLQWLPDIAVQIVLTKDRKLRAIVFNHSSLGVYNTGTLGRVTRQGVS
                     ISYTTDFDKLFGKNEDIYFTAPKPADSTSRKQKGSQ"
     gene            complement(7693..8805)
                     /locus_tag="VEV83_19690"
     CDS             complement(7693..8805)
                     /locus_tag="VEV83_19690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5009 domain-containing protein"
                     /protein_id="HYK47414.1"
                     /translation="MEPLVFKPHVSQRLLSLDFMRGFIMVLLALESTGLYEHLSDASD
                     DSWFHSFMQQFFHHPWNGLHFWDLIQPGFMFMAGVSMAYSLSRQKREGYSWSQSFKKV
                     LKRCALLFFWGVLDYAVRPGGLSFELWDVLTQLSFTTLVAFLVFDWSVTAQIVFCGFL
                     LLLTEVLYRFTNIPNFNQPFTDQHNFGNYVDVILMNKINPDGWVAINCIPTAVHTIAG
                     VLTGKLFLSNKKNKVQPLVFWGAICLVAGFGLDFAGITPIIKRIATSAFTLASLGWCL
                     WGLAFCYWWIDIRDHKKYLKFFIIVGMNSLFIYLFFEIVASRWFNDYISAITNGVMQM
                     VYTPEMVSAIISSLCIFALEWGLCYFLYKKKIFFRL"
     gene            9104..10534
                     /locus_tag="VEV83_19695"
     CDS             9104..10534
                     /locus_tag="VEV83_19695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HYK47415.1"
                     /translation="MKRIEIETRYKKMLSDVYTPVGIYLRLRDRFRDTVLLESADNTS
                     AENSFSFIAINAVGGIEIRNFELIEFKYPGHNPERTELSSMSQVPELLWNFMQQFHVN
                     SVDDKNVRIAQGLFGYCTYDAVQFFETIKLKSFTGARNPHEIAEIPLVRYRLYQYVIV
                     INHFKDEMYLCENVIPGLESEVQMIESLIKNKDVPTFPFKVKNDESENMSDQDYMDMV
                     KKGIQSCFRGDVFQIVLSRRYNQKFTGDEFNVYRALRSVNPSPYLFYFDYGDYKLMGS
                     SPESQLIIKDGKAIVHPIAGTFKRTGDEEKDKELTEALLKDAKENAEHTMLVDLARND
                     LSRCCDNVEVVHFRQVHLYSHVIHLVSEVKGKTRKDANPFELLALTFPQGTLSGAPKY
                     KAMQLIDAYEPTVRGYYAGCIGFIGFDGSCIHAIMIRTFLSKQNTLHYQAGAGIVSAS
                     QPESELQEVKNKLGALKRAIEIAETL"
     gene            10579..>11066
                     /locus_tag="VEV83_19700"
     CDS             10579..>11066
                     /locus_tag="VEV83_19700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HYK47416.1"
                     /translation="MRILVFDNYDSFTYNLVHLVEKILQERVEVYRNDQIPLKKVNEY
                     DKIILSPGPGVPEEAGLLLPLIKEYGSSKSILGVCLGLQAIGQAFGGKLENLSTVYHG
                     VATPVKVVNGQWPVANEEKNASRKICYSTSSLFEGLPETFPAGRYHSWIVSKENFPAE
                     LE"
BASE COUNT         3024 a         2465 c         2420 g         3157 t
ORIGIN      
        1 actacgataa gcagaagcgt tgaaaccaat actatccaat cggcggtgct catgaaaaat
       61 ggcgggtgaa ccaggtaaag aaaataacaa gcagcaccaa taccgagatg acgagcacat
      121 accaatagct ccattgtttg aacagcggta tcttttcttt tgattgcact gcggtaaatt
      181 acatggaaat gcaatattgc acaaatgtgt gcatcgtcga ttgataaatg gaaatatttt
      241 tattcagttg gctattctta cctctaatgc cgaaggaatg atgttaacga attgaagtcc
      301 ccgattcttt tttctttttg caggataaaa ctattcggca gccaactcag cgatcgtgtc
      361 aaaaatatct tcagcgttag gcttgctgaa gtagtcgcca tcgcttccgt aagcgggtcg
      421 atgttcttta gctgtgatgg tgcgcggagc cgcgtcgagc catttgtatc cttgctgctc
      481 ttccaatatt ttgttgaaca tatatgcagc gccaccgccc ggcacatctt catccacaaa
      541 aacaattcgg cttgttttct tcagtgattc gactatcgac tgatgtatgt caaaaggcaa
      601 tagcgtttgc acgtcgatca cttcgcagct aatgcctttt tcctcaagcc ttgcaaccgc
      661 atccatgata atgcgcaagg tagaaccgta ggaaactatc gtaacgtcat tgccttgttt
      721 aagcacttcc ggaattccca ttggtactgt aaactcgagc aggtttgaag gaagtttctc
      781 tttcaggcgg taaccgttca aacattctat cacgagcccc ggatcgttgc tgcggagcaa
      841 cgtgttgtac atacctgcag cctgcaccat attgcgtggc acgcacacgt agatgccgcg
      901 aagtgcattt attatcaccc ccatcgggga accactatgc caaattcctt cgagacgatg
      961 tccgcgggta cgcacgataa gcgggcaatg ttgcaagcct tttgtccgaa actgcagtgt
     1021 agcaagatcg tccgttaagg gttgcagccc atagaccaaa taatccaggt attgaatttc
     1081 cgcgatgggc cgtaaaccgc gtaatgcaag ccctatcccc tgcccaacaa tagtgagttc
     1141 acgaatgcct gtatcaaaga ttcggttttc tccatgcttt atttgtaaac cggcaaatgc
     1201 ctggttcacg tcgccgatca tgcccacgtc ttccccaaat gcgagcagcc tcggttcggc
     1261 gctgaataac tgatcaaaat acctgtttaa tatttcgtat ccattcatta ccggcgcatc
     1321 gtctgcatat tgagctgctt tagcctggac atttactgca ctttttcgat gatcgctata
     1381 tgtgtacgag ttgtataaac cggcattcag cgatctcaat tcagcgaaat agtcaacgag
     1441 ttctttattg cccggataat tttttgttgc atacacagcc attgccaggg ctttcatcac
     1501 gtctctgcgc aaaggttcgc ggttggcttc cagttgtttt gatagtgact gcagcttgtt
     1561 gtaaacgtcc atatcattta ctaccgaaga acgcatcaat tcaaccgcct taagcgcctg
     1621 ggcttttatt ggctcaagat attctttcca ggcattgttg cgtgattgca aaacctccgc
     1681 cctcgcatcc tcttccagct tattgagttc atctgcggtt gcaataccat tctcaattac
     1741 ccattcgcgc atttttttca ggcagtccca atcgcgttcc cactgaagac gttccggcgt
     1801 tttatatcgt tcgtggctgc ccgaagtaga atggccctgg ggctgtgtca actcttcaac
     1861 atgaaacact gcaggcacgt gtgtctctct tacttttttg agagcagttt caaatacttc
     1921 gcacatgccc gcataatccc atccttttac cgtgtaaata tctatcccgt ttgtgtctgg
     1981 ctttttctgc atgcctttta gcgcaacaga tatggagcct ttcgttgttt gataatcttt
     2041 tgataccgaa atgccatagc catcatccca aacaaaaact gccaaaggaa tttgcaaaac
     2101 acccgctgca tttatggttt cccagaaatg gccttcggaa gttgacgcat cgccgatcgt
     2161 acagatgcat atttcatttc cattgttcga aagatccgtg aaaggtttca ggacctcgct
     2221 attgcgaaac aattttgaag caagcgccaa gcctaaactg cgtggcattt gcgatgccgt
     2281 tggtgccagg tctgcggcga catttttttg attgacgaga tctttccaat tcccatcctc
     2341 gtcggtgtta gcagttacaa aatggcttac catttgcctt cccgcactaa atggatcatg
     2401 gttaacatca gggtcggcat atagctgagc aaaaaattgt tgaatggttc caatgccggc
     2461 gccaaacatt aaagtttgat cacgataata gcccgaccgg aagtcaccgg gctgaaaaaa
     2521 ttttgcaaga gcaacctgcg ccacctcttt tccgtctccg aatattccaa acttcgcctt
     2581 accggtgaga acctcctttc ttcctaaaaa acttgtttcg cggctttcaa aagcgagacg
     2641 gtaatcgctt acaacttcaa ggcgaaaatc ctcatatgag agcataccgc cggaagtttc
     2701 aggtgcagca gcaaaattgt ccatgcaaca aatgtaagta acacccttaa acgataaaca
     2761 cgaatttctc actatttggg cgaacgatgt tattagccgg atgagccggt gtcattggct
     2821 gcctttttgt ttgcgcgatg ttgagtcagc aggtttaggc gctgtgaaat agatgtcctc
     2881 gttcttccca aacaatttat cgaagtcggt agtgtatgaa atactcacgc cctgccgcgt
     2941 tacccggcca agcgtaccag tattataaac gccaaggctg ctgtgattaa aaacaattgc
     3001 gcgcaacttc ctgtcctttg tgagaacgat ctgtaccgcg atatcgggaa gccattgaag
     3061 attgttgtta gaagccgcga ccgccgcacc gcttacatta aaatcaaggt cacctccaaa
     3121 agtgactatg actttattgt tgaaaaggct cttgttaagt tttaactcta cggctcccct
     3181 gttcaatgtg cttcccgtag aaatgccgcc taaattatag ctactgtatg tttttgcgcc
     3241 gatgtcaaac tgtaacgttt tgtcaccggt tagtttataa agaaagtcag aaatcgcgtt
     3301 gttcaaaaca cctgcgactt tttgcgagat cgtgttgtaa gcagttgatt gtataaacgc
     3361 ctggttgccg gaaatttcac cgtacggtga aaaggcatca aaaacgatca gccacgtgac
     3421 ttgtttgagc atttcatttt cgtcggtttg cattttggcg agtagccggt tgaaattatc
     3481 atcattcctg atcgcactgc cttgcgggaa gtcaagcgaa aagttaatgt caggcttcgt
     3541 taacttacct gtaaggtcag cgataacata cacgtcccca cgataaccct gcacagcggg
     3601 attcaggtta agtgttgatt gactgatgag atcgcttatt gcaacattct tcgccgtgta
     3661 acgtgcacgt atttttatgt tcgcatcaaa aggatcgccc gtccattcga tataactatt
     3721 ttgttcaggc agtaattcaa atggtttttt tacgagcgat tgaaaattga aattataatt
     3781 tccattgtca atattgtaac ggccattcat tgtaatgtcc ccttgcgccg gcacctttat
     3841 cagcagcctc ccgttacccg ttgcttctat gacgtcgccc gttaattcgt cgagtattac
     3901 tgaaatagtg acatagttgg tcgccgtaag agtgagatca atatttaagt gcgttgtatt
     3961 ttctgtttcc ggttgcacct gcaatccgta ctgcttgaaa actatgaaat cagcatctgc
     4021 actttttttg ctcgtgcttg tcggaatgta aacgtgcgag aagtcgtttg cctccgcggt
     4081 gatcgtcata cgcatattct cctgcggccc tttcagcgtc aaacttcccc ttccgatcgc
     4141 cgtaccgtag aaattatcat tgtcctttgc cttcgtatct atgagtagta acttgtcggt
     4201 cgacagatca aaatcaaaac gattctcctt aaatccattt tcaaaaagtc gtccgcgcac
     4261 attaccagta ttgccaaact tgtccttgat ctcaaaagtg ccgaaatcga tcccgtcttc
     4321 tttaaacaca aaatcggctg aagggatcag gtagcgcact tgcgtgtatt tcacggtgag
     4381 tgcgccgctg tcgagatgag ctgcgccaac gaggtgaagg tctttaaagt cgccatgcaa
     4441 attgatggac cctgtcgcca ggccagtgat atcgccaaat aaattgccga ggaatgaatt
     4501 taagaagcca acttttgcat gatcaagctt catcgttgtt tcgagcgggt tatgcgttga
     4561 atctttggta ttgtacgttc cctccgcatt gagtacgaag ttttgattat tcgatccgat
     4621 tttgaacaac accttgccct cagcggtatt atatttcgaa ttgatattga ctactccgat
     4681 agaatcatta ttcagcctga attgtgaagc ctttatttct gcttccacgc gaagctttgt
     4741 ataaatatcg cgcaggtaga tagttccgtt tgcgatacct tccattaagg gcctttgaac
     4801 aaaaagtgga atgatatcac caaggttcac atctttcagt cgcacggcaa gagtatttgc
     4861 agtgcccccc tcttcttcaa cactttctac cgagatctcc tggaagccct gcgtgaactt
     4921 catattcttt gccgacgcaa aattcttggt tacgacaact tcgccctggt tttgcagatt
     4981 ccattttttg tcattaagca caaagcttga tggcctgaaa tttatcgcaa caccgtcggg
     5041 catggtacgc acatccgcct ccagctgcgc gtcgttgagc gttgtgttag cgctcgttgc
     5101 cacttgtaca tgcgagaggt cgtttgatga actgatagaa attttggtgt ttggaaaata
     5161 catactatcg ctgaggtata ttttcccaat atttcccgtc agcagcaagc tgtcgttgtt
     5221 tccgtctccc gtgataaatg catcctccaa cgaataatgt ttatacttcg cagatgcgat
     5281 cttcacgtca agattaaacc tgtttccttc acgtgtgctg atgcggccag acaagaacgc
     5341 gttgttaaag ccggaaaagt tcgaatcgag caatcttgcg taccgctcaa attggccggt
     5401 gctgatcgtg gcggtaaaat tctgattgct tagctgtgtt cttggtggat taatatacga
     5461 cggatagtaa tggtttaaaa aagattgaaa actctgcggc agctcgagta tgctgtattg
     5521 tccttccacg gaaacaagaa attcgttgct tccaattgtc agtttctttc ctgctgaatc
     5581 cagcgcggcg gttaccgcca gcgaatcgaa atccaggcgc tggctgttat gtacaacagt
     5641 tgcattcaat attttggcgt agccgagaaa atcatcaata ttatgcccct ggaaattaag
     5701 gtcaaataga cccgttatcg aaacgctgtc tttcgtgaat cctaaggcct tcaaatttac
     5761 cagtccaaga tctcccagta cgttgaatga cggcgcgctt tgatttaggt cgactacaat
     5821 cgtgctcgtg aaattaaaat ttggatcatc agccgtgaag tcgcctttga aattcttctg
     5881 ctttatctct ccgttaaatg caagatttgt gtaagtatag tccttatacg ccaacgcgct
     5941 gaaattcccg tttacccgcg tagccacctt atcaagttga aaacttttcc cctctacttc
     6001 acccttaaag ctcacattac cgaggtttgg tatcgctaaa aatttgccga ggttaaattg
     6061 ttgcgtctct acactaccgg aatacacagg ctctgcgttc ttaggaaaag acaaggagag
     6121 gtcggtatac atgccgccaa gtgcgctggc caacgtgccc tttgctttca aagtgctggg
     6181 cgtgccactg aaatttccga cgaaatgtgt gttgcctaat gcggcgaggt ccggcgtttt
     6241 tatgtttgaa attttcggat acaggaatga cacttcgcga ctgtttgttt gaacattcgc
     6301 attattcaat gtaattgtgg tcttgctgat ttcaggcagg ccttgcattt ccaggtcgcc
     6361 ggacgcatac gtgttgctgc cattacttaa aaagatattt tcaaccttaa agtgcgaaac
     6421 agtaccgtta aatttcccat ttattagaaa ccgttcgttc catgtattta aggaaggtgc
     6481 aaaaaatgcg aggtcgttcg tattgatcac gccgttacgg aaatcagcat tcatcacaac
     6541 cttttgcaca taattactca tgtcgtaatt aaaatgtttg aagtgcatgg cgtaataatt
     6601 tcccagcgtg cttcggcctg ttttaaaatt gagctttgca aactccatga tctgcggcgt
     6661 taacctgaaa tcagtttgta aatgttttag ctgcaggcca cttcgttcca cggcacttaa
     6721 attcaccgaa gctttcagcg tgtcgtttat gaatcgcaga ttattgacgg aaccgttgat
     6781 ctttgatatc tcgatgtgct tgccgtcaaa acggtctttc aacggaattt cgccgcgtaa
     6841 accgctccca aaagtgccgt cggtaatttt gatcgacgcg atctgcagtc gcatgttcga
     6901 cggatttaag tggagaactg aatcgttatt cgtgcgatcg gtcacagggt tgttcccggt
     6961 ataattttca atgttgaaat acgtcttatc catatcgatc gacttgatga ggataagatt
     7021 tttgctcagg tcaatatttt cagcgtcgag caaaagactg cctgttctta tggttaactt
     7081 ctgaccgttc cactgatcat tcttcacata aacaacattc ttcaaatcta ttttttgaat
     7141 ttgaagcacg atctttttac tctgcttttt ggattgttgt gccgaactga aatgatcgat
     7201 tatgaattga tagttccaca gtgaatcggt acgctgttgc ttgatgaccg catcttcaag
     7261 gccgatgtac ttgagctcga tgttttgctt aaaaaaaaac caatcggtaa ttcgcagttt
     7321 taatgaccct gcttttagca aagtatcttt actctggtcg aggatcagtg tattatcaag
     7381 gtccatccgg tcaaataacg agagatcaac atgccctatt ttcacggttg tgtggagatc
     7441 cttcgataat ttgttggcga tctttgagac tataaaattc tgaacaggct ccgtttggat
     7501 cagcaaccac accaataata tcaacgccag caaccctgca agtacgcgaa gagatatttt
     7561 aaggattttt ctcagcaaac gaataaatta tgaatggtaa agataaccaa catgctgatg
     7621 tttttcccct tgcggctcaa gacaggcgct aaataaaacc gaaaaatatc cctcaaagta
     7681 taaaggaata gtttatagcc tgaaaaatat tttctttttg taaagaaagt aacaaaggcc
     7741 ccattccagc gcgaaaatgc acagagaaga tatgatagca ctaaccattt caggcgtata
     7801 aaccatttgc ataacgccat tcgttattgc gcttatgtaa tcgttgaacc acctggaggc
     7861 aacgatctcg aagaataaat agatgaaaag ggaattcata ccgacaataa tgaaaaattt
     7921 caaatatttt ttatgatcgc gaatatcgat ccaccaataa caaaaagcga ggccccataa
     7981 gcaccagccc agcgatgcaa gtgtaaaagc agaagtggcg atccgtttaa taataggcgt
     8041 gatgccggcg aagtcaagac caaacccggc aaccaaacat atagcacccc agaaaacgag
     8101 tggctgcact ttattttttt tattacttag aaataattta ccggttaaaa cgccggcgat
     8161 ggtgtggacg gctgtcggaa tacagttgat ggcaacccag ccatccgggt taattttatt
     8221 cattaagatc acgtccacat aattgccaaa gttgtgctgg tcagtaaagg gctgattaaa
     8281 atttgggatg tttgtaaacc ggtacagtac ctccgtgagc aataaaagaa atccacaaaa
     8341 aacaatttgg gcagttacgc tccagtcaaa aactaaaaat gcaacaagag ttgtgaatga
     8401 cagttgtgta agaacatccc acaactcaaa cgacaagccg cccggacgta ctgcataatc
     8461 aagcacgccc cagaagaata acagtgcaca acgttttaaa acttttttga acgattggct
     8521 ccaactgtac ccttcccgct tttgcctgct taaagaatac gccatggaaa cgccggccat
     8581 gaacatgaag ccaggttgta taaggtccca aaaatgcaat ccgttccatg gatgatggaa
     8641 aaattgctgc atgaaactat ggaaccacga gtcatccgat gcatccgaaa gatgttcgta
     8701 taaacctgtg ctctcaaggg caagtagtac catgatgaag cccctcataa aatcgagcga
     8761 cagtagacgt tgcgaaacgt gcggtttgaa aaccaatggt tccatagact gtgtgttaat
     8821 cgtacaagat aaaaaatttt gttatctcat ttttgttctt caaattcgca ttgcaaatga
     8881 cggaacaaat tctaaataat aattggtggt ggcatacaaa ctccggtcgg ggcttgtagt
     8941 ggcattgcca gtattaagta taaaattaag cctcgacaag tgtcggggct tttttcttgt
     9001 tacgatcctg acctgattga tctgatgccg ctgaaaagaa attcaaaaaa tattttcggt
     9061 atcaagtcag gcgaatctgg gaaatcagaa taaaatcttg gtaatgaaaa gaattgaaat
     9121 cgagacccgt tacaagaaga tgctttcaga tgtatatact cctgttggca tttacctgag
     9181 gctgcgcgac cgtttcaggg acacggtgct tcttgaaagc gccgacaaca catccgccga
     9241 aaacagcttt tcattcattg cgatcaatgc ggtcggcggg atagagatcc gaaattttga
     9301 gctcattgaa ttcaaatacc cggggcataa tcctgaacgg actgaactct caagcatgag
     9361 ccaggtgccg gaacttctct ggaatttcat gcagcaattc catgtaaaca gtgttgacga
     9421 caaaaatgtg aggatcgcgc aggggttatt tggttattgc acttatgacg cggtgcaatt
     9481 ttttgaaact atcaagttga aatcattcac cggtgccagg aacccgcacg aaattgccga
     9541 gatcccgctc gttcgttaca ggttgtatca atacgttatt gtgatcaatc atttcaaaga
     9601 cgaaatgtac ttgtgtgaaa atgtgatccc gggattggaa agcgaggtgc agatgatcga
     9661 atcgttgata aagaataaag acgttcccac attcccgttt aaagtgaaga acgacgaatc
     9721 agaaaatatg agcgatcagg attatatgga catggtgaaa aaggggatac aaagttgttt
     9781 tcgcggcgat gtgttccaga tcgtgttaag cagaagatac aatcaaaaat tcacgggcga
     9841 cgagttcaat gtgtatcgcg cacttcgtag cgtcaacccc tctccatatt tattttattt
     9901 tgattacggt gattataaac tgatgggctc aagtcctgaa tcgcaattga tcatcaagga
     9961 tgggaaagcg atcgttcatc ccatcgccgg caccttcaaa cgcacgggcg atgaagaaaa
    10021 ggacaaggag ctcaccgagg cactcctgaa agatgcaaag gaaaatgcgg agcacacaat
    10081 gctcgttgac cttgcacgca atgatctcag ccgttgttgc gacaatgttg aagtcgtgca
    10141 tttcaggcag gttcatcttt attcgcatgt gatccacctg gtgagtgagg taaaaggtaa
    10201 aacgcgtaag gatgcaaatc cgtttgagtt gcttgccctc acatttccgc agggaacact
    10261 gagtggtgct ccgaaatata aagcgatgca gttgatagat gcctatgagc ccacggtgcg
    10321 cggatactat gcgggctgta ttgggttcat tggttttgac ggcagttgta tccatgcgat
    10381 catgatcaga acatttttaa gcaaacaaaa tacattgcat taccaggctg gtgcagggat
    10441 cgtctcggca tcgcaaccag aaagtgagtt gcaggaagtg aaaaataaac tgggggcttt
    10501 gaagagggcg atcgagatcg cggaaacgct ttaaaatttt attcatcatt caagaaatca
    10561 aaatttaagg ggtaggctat gcggatttta gtattcgata attatgattc cttcacatac
    10621 aatcttgtac acctggttga aaagatcttg caagagcggg ttgaagttta tcgcaacgat
    10681 cagattccat taaagaaagt gaatgagtat gacaaaataa ttttgtcgcc gggtccgggc
    10741 gtccctgagg aagcagggtt gttgttgcca ctgatcaaag aatatggatc cagcaaatca
    10801 atacttggtg tttgtcttgg cttacaggcc atcggccagg cgtttggagg aaaattggaa
    10861 aatctctcaa cggtttatca cggtgtggct acgccggtga aagttgtgaa tgggcaatgg
    10921 ccagtggcca atgaagaaaa aaatgcatct cgaaagattt gttattccac gagcagcttg
    10981 ttcgagggtt tgcccgaaac atttccggcg gggcgatatc attcatggat cgtgagcaaa
    11041 gaaaattttc ctgctgaatt agagat
//
LOCUS       DASQJI010000738         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2564196,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000738 DASQJI010000000
VERSION     DASQJI010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2564196"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VEV83_19705"
     CDS             complement(<1..180)
                     /locus_tag="VEV83_19705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 family protein"
                     /protein_id="HYK47417.1"
                     /translation="MTLVFAFLIGLFAGLRSFTPPAAVAWAVHLGWLKLARPLSLIGS
                     LPALIILSLLAIAEII"
     gene            complement(1206..1592)
                     /locus_tag="VEV83_19710"
     CDS             complement(1206..1592)
                     /locus_tag="VEV83_19710"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HYK47418.1"
                     /translation="MKLLLDTHIFIWWADQPEKLPPAALSALEDDANELLLSVVSVWE
                     MQIKIQLGKLKLTLPLKELLRKQQETNDLTVSPVALTHVLALDALPFHHKDPFDRLLI
                     AQSIEEGLTIVTADSQFSSYSVKLLQ"
     gene            complement(1589..1825)
                     /locus_tag="VEV83_19715"
     CDS             complement(1589..1825)
                     /locus_tag="VEV83_19715"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HYK47419.1"
                     /translation="MTQTVSVDEAQNKLPDLVAQALAGNEVIITKHGTPVARLVPVVA
                     RSNKKRVAGLNRGTISTSEDFDEPLPDDFWLGRE"
     gene            complement(2054..2130)
                     /locus_tag="VEV83_19720"
     tRNA            complement(2054..2130)
                     /locus_tag="VEV83_19720"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2094..2096),aa:Pro,seq:tgg)
     gene            complement(2146..>2335)
                     /locus_tag="VEV83_19725"
     CDS             complement(2146..>2335)
                     /locus_tag="VEV83_19725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HYK47420.1"
                     /translation="CEGTIIFEQRGTGGFGYDPLFVPDGYDQTFAELSEEVKNRISHR
                     ARALMQTRASLDHLHPSS"
BASE COUNT          605 a          586 c          577 g          567 t
ORIGIN      
        1 aatgatttct gcgatggcta acaggctcag aattatcagt gcaggaagcg agcctatgag
       61 agacagtggc cgcgcaagct tgagccaacc caggtgcaca gcccacgcga ccgccgcagg
      121 aggcgtaaac gagcgcaacc cggcgaagag tccgattaga aatgcgaata ccagtgtcat
      181 cgttatggcc ggccgacttt gcccaagacg tgttaagaaa tctatcagtt tttaacacat
      241 cttttcgacg tgttaagagc gttaacatgt ggcgcacgcg agcgcgaccc ccgaagagtt
      301 caatcagaaa tgcgaatgac agcgtaagtt gtaaccagtg atcccaaaca agacgtatgt
      361 gcgagtcaaa atcgattgat gacaaacgag ttgcaccgag tagcacacaa gcgcccgtaa
      421 taagttccac tcataatcag gccagcatga aacctgagca ttgtatgcaa ttctgtgcgt
      481 tctggcttgg gttatgtcac aaagcatgtc acacaaaaaa gtaggaccat tgacttgcgc
      541 tgaagtcatc gaggggattt tcgcttggca atggcgcagg ctttcggact tgccgctttt
      601 gcttgccttg acatagactt cgacggacct tttcaactca ttagacccgc cgttgatgta
      661 tcaaatggaa tctcaaatct atttgcttaa tgataatcag aaggtcgggc cctacaccgc
      721 taaataccta ttggaacagg taaagactgg agaattgtca cttcagacgt cagcttggca
      781 acctggtttt tcaaactggg tgccactttc gaacctaatt catccttgcc cgcagtgcgg
      841 cggagagctt tggagggtaa atgattatcc gcaaaaaggt acaggcatca ttgttatggt
      901 tctcgggatc ttgtttgctg tcttttgtgt gggcatcatt ctcatgatct ggggttttgt
      961 gcttataaac caaacgaaat ccacttggca ttgtcgcaac tgcggtcgaa catttcccgg
     1021 gtagtcccgt cacagagcgc ttcacaaaac actaaaggcc acccagaatg agtagccttt
     1081 cttccttatt cctaagcatt gttggtcggg gcgagaggat tcgaacctcc gacctctcgg
     1141 tcccaattca caggttcggc aaagaattaa tttttgcctt ttcggtaaga acgtctcaac
     1201 ggccattatt gaagcaactt aaccgaataa gatgagaact gcgaatctgc ggtgacaata
     1261 gtaagacctt cttcaatact ttgagcaatc agcagacgat caaacggatc tttgtgatga
     1321 aagggcaagg catccaatgc caaaacgtgc gtcaatgcaa caggcgaaac cgttaggtcg
     1381 ttggtctctt gttgtttcct aagaagctct ttcaacggca gagtcaattt caacttaccc
     1441 aattgaatct tgatctgcat ttcccaaacg cttaccacac tcaacagcag ttcgttagcg
     1501 tcatcttcca aagcggaaag cgcggcgggt ggaagttttt ctggttgatc tgcccaccag
     1561 atgaagatgt gagtgtcgag cagaagtttc attctcggcc aagccaaaag tcatccggca
     1621 agggttcatc aaagtcttcg ctcgtcgaaa ttgtgcctcg attgagaccc gctacacgct
     1681 tcttgttaga acgcgccaca accggaacca gacgtgctac aggcgtgccg tgctttgtga
     1741 tgattacttc gttaccagcc aaagcctgtg ccaccaaatc cggcaatttg ttttgggctt
     1801 catcgacgct gacggtttgg gtcatacgct caatcctctc aactccgaga gagtatagca
     1861 ttgtcaaaac cgttactgat tctaccggat gcaagtatgc cttcccatgc tccgcaggag
     1921 ccggcgagaa gaagtctgat tccccggcag agcctgattt aatcctacac tccttgcctt
     1981 catccgccgg agttcaggtc tttgtaaaac tgacaaatga gatacggcca ccgatgacgg
     2041 cagccgtaaa gtttggtcgg ggcgagagga ttcgaacctc cgacctctcg gtcccaaacc
     2101 gagcgcacta ccaggctgtg ctacgccccg aagaggttag gcattctaag aggaggggtg
     2161 gagatggtca agggaagccc gagtctgcat caatgcgcgg gcgcgatgac tgatgcggtt
     2221 cttaacttcc tcagatagtt ccgcgaaggt ctggtcgtag ccgtccggaa cgaacagagg
     2281 gtcgtagccg aaaccaccgg taccgcgctg ttcaaagatg atcgtcccct cacaa
//
LOCUS       DASQJI010000739         3866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1490442,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000739 DASQJI010000000
VERSION     DASQJI010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490442"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VEV83_19730"
     CDS             <1..496
                     /locus_tag="VEV83_19730"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HYK47421.1"
                     /translation="GWKYDIVYPGFKMNMPDVLAAIAFAQLKKYESFIIPERKRVCEI
                     YNEMFAECAWAIVPCFENECRRSSYHLYPLRIKNISEEQRNSIIDKITKEKVSVNVHF
                     IPMPMLTVFKDAGYNIHDYPVSYALYQNEISLPVFPQLTNEECETVVAAVKKAVSAVK
                     ELVC"
     gene            623..1255
                     /locus_tag="VEV83_19735"
     CDS             623..1255
                     /locus_tag="VEV83_19735"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HYK47422.1"
                     /translation="MKDNTRPIDIILSASGLIICSPLFLIAAILIKATSKGPVFFLQK
                     RVGLHNKDFTIYKFRTMREGAAKQNALTIGSKDSRITAIGYYLRKYKLDELPQLYNVL
                     KGEMSIVGPRPELRAYVELYSAEQRNVLSIRPGITDFASIKFKNENDLLAAADNPERY
                     YINDILPLKLQLSQQYLKNKSLRNYFFVIWATISGKTNCCNLYLENANCV"
     gene            1248..3212
                     /locus_tag="VEV83_19740"
     CDS             1248..3212
                     /locus_tag="VEV83_19740"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HYK47423.1"
                     /translation="MYRFRKFLLSNRITPKWAIFTLDLFVGILCFIYANYLLSNFRVV
                     SVNLNDLTKGVLLIAIIASSFSFIFKTYDGIIRLSAFQESLRSITAIFCTSFLIFILN
                     VFLDVLTIPTFAANSSLIIYFFTTSFLLCGYRIFVRQLYLTGIQSTRSENVVIFGVSA
                     DFSLLKNTMETISDSGYQVVAFIDDDERYIGKMIDGIRIHSVENIGVLLDTQDVSYLF
                     FADPSIRSEIKNKLVDVCFAHQIKVLNIPPAKDWIHGNIHINQFQEVTIDELLNRPPI
                     LMNNSNVTNYIRNKKVLITGAAGSIGSELAKQIAAMGPEVLILCDKFETGLHDLEYAL
                     HGSFDSFKLKPFLVDVKDHYALQQVFNQYRPEIVFHAAAYKHVPIMEKHPSEAIRNNV
                     LGTKIVANLSVMYGVEKFLFVSTDKAINPTNIMGASKRLAEIYCSCMHNMHHVSALDE
                     NGVIQLQPYHQKTQFITTRFGNVLASNGSVIPRFREQIANGGPVTVTHPEVIRYFMTI
                     SEACSLVLEAATMGNGGEIFLFDMGKPVKIIDMARKMIRLAGYEPGKEINIVFTGLRP
                     GEKLYEELLNKQEEVIPTHHHKILAAKTSPCNYVAMQQAIDRLLHVADTYNDEKVVQM
                     MKSILPEFISNNSVYEMYDDSPADARISSV"
BASE COUNT         1094 a          846 c          846 g         1080 t
ORIGIN      
        1 gggttggaaa tatgacatcg tttacccggg atttaaaatg aacatgccag atgttctcgc
       61 agccatagca ttcgcacagc taaagaaata tgaatcattt attatccccg aacgcaaacg
      121 ggtttgtgag atatacaatg aaatgtttgc ggaatgcgcg tgggcgatcg ttccatgttt
      181 tgaaaatgaa tgcaggcgat catcttatca cctgtacccg cttcgtataa aaaatatttc
      241 agaagaacag cgtaactcaa ttatcgacaa gatcacgaaa gaaaaagttt cggttaacgt
      301 gcacttcata ccaatgccga tgctaacggt ttttaaagat gccggttata acatacatga
      361 ctatccggtt tcgtatgctc tttaccagaa cgaaatttcc ctgcctgttt tcccgcaatt
      421 aacgaatgaa gagtgtgaga ctgttgtcgc agccgtgaaa aaagctgtat ctgccgtaaa
      481 ggagttggtt tgttaagcgt aacaccacga ggcatcggac cgcgccgagc agtctgaccg
      541 ggaacggtcc ttcgtctgtc agacttccta aacgcgagac cgcaataatc gtatagcgcc
      601 ttgacgtctt caaggaaaca gtatgaaaga taacacccgg cccatcgata taatactttc
      661 cgcttcgggg ctgatcattt gctcgccttt atttttgatc gcagctatat taatcaaggc
      721 gacttcaaaa gggccggttt tttttctcca aaagcgtgtt ggcctgcata ataaagactt
      781 taccatctac aagttcagaa cgatgcgcga aggcgctgcg aagcaaaatg cgttaacgat
      841 cggcagtaag gactcgcgga tcacggcgat cggttactat cttcgaaaat acaagctcga
      901 cgaactgcct cagttatata atgtattgaa aggggagatg agcatagttg gcccgcggcc
      961 ggaactgcgc gcgtatgtgg agctgtactc tgcggaacaa cgaaatgtgc tttccatacg
     1021 gccgggcatc accgactttg cgagcatcaa gttcaaaaac gaaaacgatc tattggcggc
     1081 tgctgacaac cccgaacgct attacataaa tgatattctt ccgctcaaac tgcagttaag
     1141 ccagcagtat ttaaaaaata aaagccttcg taattatttt tttgtaattt gggccactat
     1201 ttcgggcaaa accaactgct gtaatcttta ccttgaaaac gctaactgtg tatagattta
     1261 gaaaatttct tttatcgaac cgaataactc ccaagtgggc gatttttaca ctggatttat
     1321 tcgtgggtat actgtgcttt atttacgcca attacctgct cagcaatttt cgtgttgttt
     1381 cggttaacct gaatgacctt acaaagggtg ttttgcttat tgccatcata gccagctcat
     1441 tcagttttat ttttaagacc tatgacggca ttatcaggct ctctgcattc caggagtctc
     1501 tgcgttcgat cactgctatt ttttgtacgt ccttcctgat atttatcctg aatgtgtttc
     1561 tcgacgtttt gacgattcca acatttgccg ccaattcgtc gcttattatt tattttttca
     1621 ctacgtcgtt cctgctgtgt ggttaccgca tcttcgtcag gcaattatac ctgacgggca
     1681 tacagagcac ccgaagcgaa aatgtggtaa tctttggagt gagtgccgat ttctcattgc
     1741 tgaaaaacac aatggaaact atttctgatt ccggatacca ggtggttgca tttatcgacg
     1801 atgatgaacg ctacattggc aaaatgatcg acggtatacg cattcactca gttgagaata
     1861 tcggcgtgct gctcgatacg caggatgtca gttatttgtt cttcgctgat ccgtcgataa
     1921 ggtctgaaat taaaaacaag cttgttgatg tttgctttgc gcatcaaata aaggtgctta
     1981 atataccgcc ggcgaaagat tggatacacg gaaatattca tattaaccag ttccaggaag
     2041 taaccatcga tgagttgctc aaccgtccgc cgatcctgat gaacaattct aatgttacaa
     2101 attatatcag gaataaaaaa gtattgataa caggagccgc aggatcgatc ggaagtgagt
     2161 tggcgaaaca gatcgctgcc atgggtccgg aagtgctcat cctgtgtgat aaatttgaaa
     2221 ctggtttgca cgatcttgag tatgctttgc acggctcatt cgattcgttt aaattgaagc
     2281 ccttcctggt agatgtaaag gaccattatg cgttgcagca ggtcttcaat caataccggc
     2341 cggagatagt ctttcatgct gccgcataca agcatgttcc tatcatggaa aagcacccgt
     2401 cggaagcgat ccggaataat gtgcttggaa cgaagatcgt cgctaacctt tcggtgatgt
     2461 acggcgtgga aaagttcctt tttgtatcaa ccgataaggc aattaatcct acgaacatca
     2521 tgggcgcatc aaagcgcctt gctgaaattt attgttcgtg catgcataac atgcatcatg
     2581 tttcagcgct tgatgaaaat ggcgtgatcc agttacagcc gtatcaccaa aaaacgcagt
     2641 tcatcaccac ccgttttgga aatgtgctcg catccaatgg gtcagtaata ccgcgcttca
     2701 gggaacaaat tgccaacggc ggcccggtca ctgttacaca tccggaagtg ataagatact
     2761 ttatgacaat ttccgaagcc tgttcgctcg tactcgaagc ggcgacgatg ggcaatggcg
     2821 gtgagatatt cctgtttgat atgggtaagc cggtcaaaat tattgacatg gcgcgtaaaa
     2881 tgatccgtct tgcgggatac gagcctggta aagaaatcaa tattgtcttc acaggtcttc
     2941 gtcccggcga aaaattatac gaagagcttt tgaacaaaca ggaagaagta attcctacac
     3001 atcaccataa gatcctcgct gcaaaaacga gtccttgcaa ttatgtagca atgcaacagg
     3061 ccatagatcg gcttcttcac gttgctgata catataatga tgaaaaagtg gtgcagatga
     3121 tgaaatctat attgccggag ttcatcagca acaactctgt ttacgaaatg tatgacgact
     3181 cgcctgcgga tgcgcgtatt agttctgttt aaaagtttat tggttaattg gtttattagt
     3241 tattagttta ttagggcgct gtttatagtg aatttgtaaa agtaagttcg ggcgtttcac
     3301 taactaataa actgacgtgt tgtgccatta cgatcgacca cgaaaaattc tgttaagcta
     3361 gtttgctgcc ggaacatatg gcaaccacgg cgccgtcatg cccggcccga ccgggcatct
     3421 gctctaagta atttaagagg ccaataaata aatctttcca cccgggattg aaatccgaat
     3481 caatctcaaa ctgaacccct cgcaacgtta ttctgccgaa agcggaaatc cccgcctacg
     3541 gagcaattat aacgaaagaa tttcttgtaa taggcgacat tgtatttagc aactgttgca
     3601 atcccaatgc aacatccgaa atcctaagag atacccgatc attggcattc cggatctatt
     3661 aagccgccgt tcgggtatga cggtgaaaaa aatgttttgt cgttatgaaa gactcgccca
     3721 tcgtggacct tgccggctat gaccggaatg tggtgctacg gacactatta tactgcaagg
     3781 atcgctatca tttgactcaa ctaatagcac aatacgttag ctgactaata acccaaataa
     3841 ctaataaacc aatcaactac tgccct
//
LOCUS       DASQJI010000740         1962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_876193,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000740 DASQJI010000000
VERSION     DASQJI010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876193"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1851)
                     /locus_tag="VEV83_19745"
     CDS             complement(<1..1851)
                     /locus_tag="VEV83_19745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1549 domain-containing protein"
                     /protein_id="HYK47424.1"
                     /translation="MRLARNRKILVVAVIVLLAITAFTFSTSHQEIDFNTQVKPIFNK
                     NCITCHGGVRQQANFSLLFRDWALKKCKDGKYAIIPGDPDHSEMIRRVTLNDPEDRMP
                     YHHDPLSKDQIDILREWIKQGAKWGDHWAYVPVQKIEVPKPKSSLFGLIPAKKIDWAK
                     TDVDYFIYDKLQQNKLQPSPGADKATLLRRVSLDLIGMPAPDNIAQQYLKDNSDKAYE
                     NLVDSLLASKHYGEKWTAMWLDLARYADTKGYERDDSRTIWKYRDWLIDAFNRDMPYD
                     KFLTDQLAGDLLPNATDKDFIATAFHRNTMTNDEGGTDNEEFRTAAVLDRVNTTWQAL
                     MGTTFGCVQCHSHPYDPFKHDDYYKFMAFFNDSRDEDTYADYPLLREYKTDDSLKVLQ
                     VVNWLRENARADEAKGVYIFLKTWQPAYNSLRADSFTNSELADTKWLIFRNHAVARLK
                     HVDLNNKTELIYRYNGMVAGGTWVIHLDSPDGPVIASIPVQKTKNWAIRCQTLLKCQT
                     ADNLQGYHDLFFTYTNSKLQKPEDSGVMFDWFYFTHPLEGKDKPGYNETKKTYWSLLK
                     NDSVPTTPVMMDNPSDMHRVSNVFEKGNWLVKGAVVQPDVPHSLNAFPKSA"
BASE COUNT          524 a          440 c          422 g          576 t
ORIGIN      
        1 cgcacttttg ggaaacgcat ttaatgaatg aggaacatcg ggctgcacga cagctccctt
       61 caccagccaa ttgccttttt caaacacatt cgacacacga tgcatgtctg aaggattgtc
      121 catcatcacc ggcgttgtag gaacggaatc gttttttaat aagctccagt atgttttttt
      181 agtttcgtta taaccgggtt tatcttttcc ctccagcgga tgcgtgaaat aaaaccagtc
      241 gaacatcacg ccgctgtctt caggcttttg taacttggaa ttggtgtagg tgaagaagag
      301 atcatggtaa ccttgtaagt tgtcagctgt ctgacacttt aaaagtgtct gacacctgat
      361 cgcccagttt tttgttttct gaactggaat ggaagcaatc actggaccgt ccggtgaatc
      421 gaggtgaatt acccaggtgc caccagcgac catcccattg tagcgataaa ttaattcagt
      481 cttgttgttc agatcaacat gcttcaaccg cgcgactgca tggttgcgga atattagcca
      541 ctttgtatca gccagctcac tatttgtaaa actatctgca cgcaatgaat tgtaagccgg
      601 ttgccacgtc ttcaaaaaaa tataaacgcc tttagcctca tctgcccgcg cattttcgcg
      661 cagccagttc acgacctgca aaacctttaa gctatcatct gttttatatt cacgcagtaa
      721 aggataatca gcatacgtgt cttcatcacg cgaatcgttg aagaacgcca tgaacttgta
      781 atagtcatca tgcttaaatg gatcataagg atggctgtga cattgtacgc atccaaacgt
      841 tgttcccatt aatgcctgcc aggttgtgtt cacacgatcc aatactgccg cagttctaaa
      901 ttcttcatta tctgttccgc cttcatcatt cgtcatcgtg ttgcgatgaa atgcagtcgc
      961 gataaaatcc ttatcggttg catttggcaa aagatcacct gcaagttgat cggttaagaa
     1021 tttgtcatac ggcatatccc ggttgaaagc atcgatcagc cagtcgcgat atttccagat
     1081 ggtgcgactg tcgtcacgct cataaccttt cgtatccgca taacgtgcaa ggtcgagcca
     1141 catcgctgtc catttttcgc cgtaatgttt tgatgcgagc aatgagtcga cgagattttc
     1201 gtacgcctta tcactgttgt cttttaaata ttgttgtgca atgttgtcag gcgcaggcat
     1261 accgatcaga tcgagagaaa cccttctcaa taaagttgct ttatctgcgc cgggcgatgg
     1321 ttgtaattta ttttgctgca gtttgtcgta gatgaaatag tcaacatcag tttttgccca
     1381 gtcgatcttt ttcgcaggga tcaatccgaa caacgaagat tttggtttcg gtacttcaat
     1441 tttttggacg ggcacataag cccagtgatc accccacttt gcgccttgtt tgatccattc
     1501 acgcaaaata tctatttgat ctttggataa aggatcgtgg tgatacggca tgcgatcttc
     1561 cggatcattc aatgtaacac gccggatcat ttcgctgtga tcaggatcgc cgggaatgat
     1621 agcgtacttt ccgtctttgc atttcttcag agcccaatcg cgaaacaata aactgaagtt
     1681 tgcctgctgt cgcacgccgc catggcaagt gatacagttt ttgttgaaaa tgggctttac
     1741 ctgcgtgttg aaatctattt cctggtggga tgtggaaaac gtgaatgcag ttatggcaag
     1801 caacacaatg accgcaacaa caaggatttt tctatttcga gccaggcgca tcaaaaatcg
     1861 ttaaggggat taaaggtaaa atattttctg aaccacatag gaacatagga acataggtta
     1921 acacatagaa gaagaacgct gataagaagt atccaaataa ac
//
LOCUS       DASQJI010000741         3309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_414645,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000741 DASQJI010000000
VERSION     DASQJI010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414645"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VEV83_19750"
     CDS             <1..732
                     /locus_tag="VEV83_19750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK47425.1"
                     /translation="AHEIQNPLNFVNNFSEVNKELAEELKTELLADNKEEAISIAHII
                     IDNEEKINHHGKRADAIVKNMLQHSRQTKSIKEPTDINALCDEYLRLCYHGLRAKDKE
                     FNATLQTDFDNTIKKINVVPQDIGRVLLNLFSNAFYAVMQKQNNLKGSSNLSAQPYVP
                     AVTVVTKQLRDKIEIRVDDNGNGIPQNIVDKIFQPFFTTKPTGQGTGLGLSLSYDIIK
                     AQGGEIKVETKDGEGSGFIIQLSAA"
     gene            742..2808
                     /locus_tag="VEV83_19755"
     CDS             742..2808
                     /locus_tag="VEV83_19755"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47426.1"
                     /translation="MKEFIKICFLLLIPCILQAQHNPYWENPKLEEVSRMRVEFSNDL
                     NDTTRMYLSKQLGLFYYEANTDSSLYYLENELLIAKKLNFELWQADALCAIGYVHSLM
                     SNYSKALSSLLAALKIAEDKTSEKKIWRISYFAKDNNPESARLLVLASTHHNLGHLYG
                     WTRNKEKQLAEYSESLSIAEKIKDLALLSLVHMNLGNVYEHMGHSDTALSHEQTALKY
                     SDSSGFTKYKGLILCRIGDICIKQGKYDVAKKYLLESINANEEQSVLSFLAEACVTLS
                     NLFLMNGNLDSSFYYANEGLNASLAAGYSFETLNAYKVLSSIYSGRGKTDSAFKYQKL
                     AFAVNDSLFTIEKNNQFQNIGFEEQNRLQELEKDKIKTEDKIRSYALLAGLGVLLIIG
                     LILYRNNRQKQKANKVLETTLTNLKSTQAQLIQSEKMASLGELTAGIAHEIQNPLNFV
                     NNFSELNDELIQEMKDETDVYQIKIIVNDIQQNNEKISFHGKRADSIVKSMMQHSKQT
                     EGVKDLTDINALCDEYLRLSYHGFRAKDKSFNADFKTDFDDSIEKVNFVLQDIGRVLL
                     NLYNNAFYAVSEKAKKAVGLQKELTGTSNLSGRQAYVPTVTVVTKKLTNTIEIRVKDN
                     GHGIPQNIVDKIFQPFFTTKPTGEGTGLGLSLSYDIIKAHGGEIKVETKQGEGSEFIM
                     FLPDDK"
BASE COUNT         1167 a          576 c          659 g          907 t
ORIGIN      
        1 gcacatgaga ttcaaaaccc tttaaacttc gtgaataatt tttctgaagt aaataaagag
       61 ttggcagaag aattaaaaac agaattgctt gcagataaca aagaagaagc tatttcaatc
      121 gctcatataa ttatcgacaa cgaggaaaaa ataaatcatc atggtaaacg tgcggatgct
      181 attgtaaaaa atatgctgca gcactcacgg caaacaaaaa gtataaagga gccaaccgac
      241 attaatgctt tgtgtgatga atatctgcga ttgtgttatc acggtcttcg cgcaaaagac
      301 aaagaattca atgcaacact gcaaactgat tttgataata ccattaaaaa aatcaatgtt
      361 gttccgcagg atatcggaag ggtcttattg aatttgttca gtaacgcctt ttatgcggtg
      421 atgcagaaac aaaacaacct taaagggtct tctaacctgt cagctcagcc ttacgtccct
      481 gccgtaacag ttgtcacaaa acaactgagg gataagattg aaataagagt tgacgataac
      541 ggcaacggca ttcctcaaaa cattgttgat aaaatattcc aacccttctt caccaccaaa
      601 ccaacaggac agggaactgg attaggattg agtttgagtt acgatattat caaagcacag
      661 ggaggagaaa taaaagtaga gacaaaggat ggtgaaggat cgggatttat tattcaatta
      721 tcagcagcat aaacgatttg aatgaaagaa tttataaaaa tatgtttctt actcctgatt
      781 ccttgcattc tccaggcgca gcataaccct tattgggaaa atccgaagtt ggaagaagtt
      841 agcaggatgc gtgtagaatt cagcaacgat ttgaatgata ccactcggat gtacttaagc
      901 aagcaattag gactatttta ttatgaagcg aacactgata gctcactcta ttatttggag
      961 aatgaattat taatagcaaa aaaattgaat ttcgagttgt ggcaggcaga tgcattatgc
     1021 gcaattgggt atgttcattc cttaatgtct aattattcaa aagctttaag ttctttatta
     1081 gctgctttga aaatagcaga agataaaacc agtgaaaaaa agatttggcg gatttcctat
     1141 ttcgcaaaag ataataaccc agagagcgcg aggctcttag ttcttgcaag tacacatcat
     1201 aatttagggc atttgtatgg ctggaccagg aataaagaga aacagcttgc cgaatattca
     1261 gaaagtctaa gcatcgctga aaagattaaa gatctggccc tattatcttt agttcatatg
     1321 aatttgggga acgtctatga gcatatgggc cattcagaca ccgcactcag tcatgaacaa
     1381 acagcattga aatattctga ttcatcaggg tttacaaaat acaagggatt gattttatgc
     1441 agaatcggag atatatgcat aaagcagggg aaatatgatg tggcaaaaaa atatttatta
     1501 gagtcaatca atgcaaatga agagcaatcg gttctttctt ttttagcgga agcctgtgta
     1561 acattatcaa atctattttt aatgaatggc aatttagatt caagttttta ttatgccaat
     1621 gaaggcctga atgcttcact agcagcaggc tactcatttg aaactttaaa tgcctataaa
     1681 gtcctttctt ctatatatag cggcagaggc aaaacagaca gtgctttcaa atatcagaag
     1741 cttgcattcg ctgttaacga cagcttgttc actattgaaa aaaataatca gtttcagaat
     1801 atcggcttcg aggaacaaaa ccgtctacag gaacttgaaa aagataaaat aaaaacggaa
     1861 gacaagatca ggagctatgc tttgttggct ggcttaggag tactcctgat tattggatta
     1921 atactctacc ggaataaccg gcaaaaacag aaagccaata aagtgttaga aacaacattg
     1981 accaatttaa aatctacaca agcacaattg atccaatcag aaaaaatggc ttcgcttggt
     2041 gaactcacag caggcattgc acacgagata caaaaccctt tgaacttcgt gaataatttt
     2101 tctgaattga atgatgagtt gatccaggaa atgaaagatg aaaccgacgt gtatcagata
     2161 aaaattatag taaatgacat acaacaaaac aatgaaaaga tttcttttca tggcaaacgt
     2221 gcagactcga ttgtaaagag catgatgcag cattcaaagc aaacagaggg tgtcaaagac
     2281 ttaactgata tcaatgcttt gtgcgatgaa tatctgcgat tgagttatca tggttttcgt
     2341 gccaaagaca aatcattcaa tgcagatttt aaaacagatt ttgatgacag cattgaaaag
     2401 gtaaacttcg ttctgcaaga tatcggaaga gtgttgctca atctttacaa caatgcattt
     2461 tacgcagtaa gcgaaaaggc taaaaaggcc gtgggtttac aaaaagagct gacaggaact
     2521 tcaaacctgt caggtcggca agcttacgtc cctactgtca ctgtggtcac aaagaagctg
     2581 actaatacaa ttgaaataag agtcaaagac aatggccacg gcattccgca aaacattgtt
     2641 gacaaaatct ttcagccatt cttcaccacg aaacccacag gtgaaggaac tggattagga
     2701 ttgagtttga gctatgatat catcaaagca catggcggcg aaataaaagt agagacaaag
     2761 caaggcgaag gaagcgagtt cattatgttt ttaccagatg ataaatgatg taaaccatga
     2821 aatactatat aattctttgc acgataccga tacctgcaac aaatggaaaa tgtcgtcttg
     2881 cggatttgta cgaaccttct taattatctt aaacggttgg atgacgctta cgccagtcag
     2941 tatgtgcttc gtacgcattg ccaatcctgc agagcattgc ttcattgaaa tcagaaccga
     3001 caaattgcac agtgataggg agaccttccg aagaaaaata catggtacag acaatgtagg
     3061 gctttctgaa aaattaaaag ataatgtcgc cggcaatatc tttctccaga taaatgccgt
     3121 gacttcccat ccgtttgcgt ttgaaatgtc gaattgaaca ttttgttggg ttctcgtttg
     3181 ctcaaatatt ttaaaaatcg gctagacaca attttgacga ttgtgtaaaa aagtgtgtct
     3241 tattgttgac aggaaatcaa accactgaga aatatttaca ttgtggatgt tctttactca
     3301 gctacattt
//
LOCUS       DASQJI010000742         2768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1642418,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000742 DASQJI010000000
VERSION     DASQJI010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1642418"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VEV83_19760"
     CDS             complement(<1..273)
                     /locus_tag="VEV83_19760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47427.1"
                     /translation="MFRNYFITTWRNLSRNKIYTFINIAGLSLGLACAMLIILYVKDE
                     VSYDRFHKNVNQVYRITTQNLNPDGTKGNKDGNTGYLQGPRFAANIP"
     gene            complement(425..>2768)
                     /locus_tag="VEV83_19765"
     CDS             complement(425..>2768)
                     /locus_tag="VEV83_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47428.1"
                     /translation="RNLMRNKGFSVINIVGLSIGMASAILIFLWIQNEVNFDRFHKNT
                     DRLYVMYSRENNNGKLDAWGRTAALMAPTLKDEYPEVEDAVRFTTVYFLLTRGDKQFN
                     GGGAFADPGFLSMFSFPLRDGDPQTALDGVYNIVLTKTLAEKLFGNEDPIGKTVKIDS
                     TDLFKVTGVLNDLPNNTELNFEYLLPWSYMRKLGWEEGQTWSYTNTVTYVLLKPGASE
                     KVFDAKVKDIVKSHVAQGEGSGREVFTQPLSREHLYSKSENGQLVAGRVQIVNLFTII
                     AIFILLIACINFMNLSTARSEKRAKEVGIRKVVGARKISLVVQFIGESVLFSAIAFVV
                     ALAIVQLSLKAFDQLVAAPLKIDFTNPYFWLYSVAFILVTGILAGSYPAFYLSASQPI
                     SVLKGVFKNVHALVTPRKVLVVLQFSFAVMFIICTMIVQRQIQYALNRDAGYNRNDLI
                     FVFTQGDMNKHYDLIRHDLVADGAAVSVTKTFSPITRAWGVMTALSWQGASEEDKKTN
                     FLQFEADANFIKTTGTKLLQGRDIDITKYPTDSSAMLLNEAAVKMMQLKDPVGTTITK
                     DDGSVYHIIGVIKDFIIESPYDKIEPMIIQGPSRDFGVIHIRLNPANSTAADLAKAEK
                     IFKQYNPQVPFDYVFADESYAKKFSDEQQEGTLAALFAGLTIFISCLGLFGLAAYMAE
                     SRTKEIGMRKVLGASVTNITALLSKDFIKLVLISIVIASPVAWYAMNNWLQNYNYRIQ
                     VNAWIFLEAGSLALLIAFLTVSYQAIKAAVANPVKSLRTE"
BASE COUNT          752 a          666 c          572 g          778 t
ORIGIN      
        1 cggaatattt gctgcaaagc gcgggccctg caaatagccg gtgttgccgt ctttatttcc
       61 ctttgtccca tcagggttta ggttctgcgt tgttatgcga tagacctggt tcacattttt
      121 atgaaaccga tcatagctta cttcgtcctt tacataaagg ataatgagca tcgcgcacgc
      181 aagtccaaga ctcaagcccg cgatgtttat aaatgtatat atcttgttgc gtgataagtt
      241 acgccaggtg gtgatgaaat agttacgaaa cattttgatt tacgaattag gatttacaat
      301 ttacaattgc agatttcaga ttgcagattg cagatttgaa aaactttaaa catcaaacca
      361 acgtccggcc gacctcaaac ttcaaacatc aaacttcaaa cttcaaacct caaacatcaa
      421 actactattc ggtccttaaa cttttcacag gatttgctac cgcggctttt atcgcctggt
      481 aactcaccgt taaaaacgcg atcagcaagg cgagggaacc tgcttctaaa aatatccatg
      541 catttacctg tatccggtag ttataatttt gcaaccaatt attcatggca taccatgcaa
      601 ccggcgatgc gatcacaatt gagatcagta ccagcttgat aaaatccttc gacagcaacg
      661 ccgtgatatt tgtgacggag gcgcctaata ctttgcgcat gcctatttct tttgtcctgc
      721 tttcggccat atacgctgca agaccgaaca gcccaagaca ggaaatgaaa atggtaaggc
      781 ctgcaaacaa tgccgcaaga gtgccttcct gttgctcgtc cgaaaacttt ttcgcgtacg
      841 attcgtcggc aaaaacataa tcaaacggga cctgcggatt gtattgctta aatatctttt
      901 cggctttggc aagatctgcg gcggtactgt tggcggggtt aagccttata tgaataactc
      961 caaagtctct cgaagggccc tgtatgatca tcggttcaat tttgtcatac ggtgactcga
     1021 tgatgaaatc ttttataacg cctattatgt gataaacgct gccgtcgtct tttgttattg
     1081 tagtgccgac cgggtctttc aattgcatca tcttcaccgc agcttcattt aacagcatcg
     1141 ctgaactgtc ggttggatat ttggtgatat cgatatctct gccctgtaac aattttgtcc
     1201 cggttgtttt gatgaaattc gcgtcagcct caaactgcaa aaaattcgtt ttcttatctt
     1261 cttcactggc tccctgccat gatagagccg tcataacgcc ccatgcacgc gtgatgggag
     1321 aaaatgtttt tgtcactgac accgctgctc catcggccac aaggtcatgc ctgatgagat
     1381 cgtaatgctt attcatatca ccttgcgtga aaacgaagat caggtcattc ctgttgtagc
     1441 cggcatcccg gttcagcgca tattgtatct ggcgctgaac gatcattgtg cagatgataa
     1501 acattaccgc aaaactgaat tgcaatacga ccagcacctt ccttggcgtt accaatgcgt
     1561 gaacattttt gaagactcct ttcaatacgc ttatcggttg ggatgctgac aggtaaaacg
     1621 cggggtaact gccggcgagt atgccggtaa ctaaaatgaa ggcaacagaa tacagccaga
     1681 agtaagggtt tgtaaaatca attttcagag gtgcagcaac caactggtca aaagctttca
     1741 aacttaattg aacaatagca agagcgacaa caaatgcgat cgcggaaaac aaaacgcttt
     1801 cgccaataaa ctgcacgacc agcgatatct tgcgtgcacc gaccacttta cgaatgccca
     1861 cttccttcgc ccgtttctca ctgcgggccg tacttaagtt catgaagttt atgcaggcga
     1921 tcagtaaaat gaaaattgcg atgatcgtga agagattcac gatctggacg cggcctgcaa
     1981 ccagttgacc attttcggat ttggaatata aatgttccct gctcaacggc tgcgtaaaga
     2041 cttctcttcc ggagccttct ccctgggcta catggctctt aacgatatcc ttcactttag
     2101 catcaaacac cttctcagag gcacccggtt tcagcaaaac atatgtgacc gtatttgtat
     2161 agctccatgt ttgcccttcc tcccagccca atttcctcat ataactccac gggagcaaat
     2221 attcaaaatt cagttccgtg ttgtttggca gatcattaag cactccggtc actttaaaaa
     2281 ggtccgtgct gtcaatcttc actgttttac cgatcgggtc ttcattgcca aataattttt
     2341 ctgctaatgt ttttgtgagc acgatattgt aaactccatc caaagccgtt tgtggatcgc
     2401 catcgcgtaa agggaaactg aacatagaaa gaaaacccgg atcagcaaat gcaccgccgc
     2461 cattaaattg tttgtcgccg cgcgtaagta aaaaataaac ggtcgtaaat ctgacagcat
     2521 cttccacttc cgggtactcg tccttgagcg taggcgccat caacgcggcc gtacgtcccc
     2581 atgcatccag ttttccattg ttgttttcac gactgtacat cacataaagg cggtctgtgt
     2641 ttttatgaaa gcggtcgaag ttcacctcat tttggatcca caaaaagatc aggatcgcac
     2701 tggccattcc aatcgacagc ccgacgatat tgataacaga aaaacctttg ttgcgcataa
     2761 ggtttcgg
//
LOCUS       DASQJI010000743         5172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2565868,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000743 DASQJI010000000
VERSION     DASQJI010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5172
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2565868"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VEV83_19770"
     CDS             complement(<1..471)
                     /locus_tag="VEV83_19770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate deaminase"
                     /protein_id="HYK47429.1"
                     /translation="MVIEDEIRLDHVYVHQLHDKFLEDAAVNVDVLRLDRIHPVVSGN
                     KWFKLKYHLQYANKHSYRSIATFGGAFSNHIVATAYACHIQRLDCTGYIRGERPKHLS
                     QTLLDAQALNMHLEFVSRKDFTNKQVLIDRNPAVYFIPEGGYGDAGVRGAAEILQ"
     gene            complement(489..1181)
                     /locus_tag="VEV83_19775"
     CDS             complement(489..1181)
                     /locus_tag="VEV83_19775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK47430.1"
                     /translation="MSKIRCIVIEDEPLAVKVLSDYISQVPFLELQQTFKDAIAATDW
                     LRNNHTDLIFLDIHLPKLKGMAFLRTLANPPAVIITTAYHQYAVEGFNLSVTDYLLKP
                     FEFDRFLNAVNKVKPAIAGKPMKEGSEDQRDHLFLNVQKKKVKILFSDIVYIESQREY
                     IRIITTKKEYLTKMSTHEIEALLPPNLFKRIHRSFIVSVGKIDSYTSEMVDVAGTSIP
                     IGRGYRDVIDNL"
     gene            complement(1147..2229)
                     /locus_tag="VEV83_19780"
     CDS             complement(1147..2229)
                     /locus_tag="VEV83_19780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47431.1"
                     /translation="MKVSVTKEQLALYGWLALGYFLMGFFTIIGKYPGRFFAVVFNNI
                     WGVIYVAIVTYFLFEYTNPYLLKKRKSIIYNILIAIPVLFFYMILYSYGSYLWRLLGI
                     QLHIYTQLKVYATEDDALQNQMGYSTGGVVFFGIIRHIYKYTRLRQAAQQLRIEKQEA
                     ELNYLRSQTNPHFLFNTLNNIYSLARDKSDLAPKSILNLSKILRFMLYETSGQFIAIG
                     DELKIINDYIALEKLRYDESLRVNFNHDVEDMKQSVPPLLLIPLVENAFKHGVSETRD
                     HPFVDIHLSVNNRQLNFVVKNSTDSFPADKGVKKTIGLANVRRQLELLYRDYDLSVEQ
                     SDSVFTAILKINLASHVENKMYSNRR"
     gene            3232..4578
                     /locus_tag="VEV83_19785"
     CDS             3232..4578
                     /locus_tag="VEV83_19785"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK47432.1"
                     /translation="MKKILVISLMTVCISTHLRAQSERDAGTWKTWFISSGKDYRLPA
                     PQSYKNEIDQVLAAQKNLDSAGWQQIMYWNAGSPGYRWESIIPITSDTSNNGVLVLAN
                     MLLKVAIYDATVAAWNTKYAYNRPRPFAADKRIKCFALKPESPSYPCEYSVAAGVAVT
                     IISHFYPSWSDSINQLAQQQMKSRVAAGLAFPDDTRAGFELGKTIAEKEIEHTKDFVP
                     KTAWDGKMPDKPGIWKGKFAMFPLAAHNKTVVLDSASEFRPGPPPDFAKDMAELKSFK
                     QTFRSMSNAFFWASHDFWSDILDTKMFEYNIQLDPPRAARLYAISAIGLYDGFVSCFD
                     AKYAYWGIRPNQYDTSFHPALLVTPPFPGYPSGHATVSGVMAELYSYFFPAEAAYFRK
                     KAKEGAESRFQAGIHFRTDNEVGLDLGRKVANAIIQKVKDDGAGNDVVLAHENDKQ"
     gene            4621..>5172
                     /locus_tag="VEV83_19790"
     CDS             4621..>5172
                     /locus_tag="VEV83_19790"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HYK47433.1"
                     /translation="MKMSVKQMARIGGVFYLLIILAGVIGEFFVRAKLIVSADAVATA
                     NNIAGSPLLWRIGIAGDLFMHVCDIPLVLIFYILLKPVSKNLALLAMLFVLTQTAVLI
                     ASKLILFMPLFLTSDVGYLKVFTPDQLDALSYLAIRLDAYGFGVGLIFFGFACLIIGH
                     LIVRSGYLPKFIGVMMQIGGACYL"
BASE COUNT         1380 a         1117 c         1155 g         1520 t
ORIGIN      
        1 ctgtaaaatt tctgccgcgc ctcttacacc ggcatcacca tagccgccct ccggtataaa
       61 atatacggcg gggttacgat cgatgagcac ctgtttgttt gtaaaatctt tccggcttac
      121 aaattcaaga tgcatgttca gggcctgtgc atcgagcagc gtttgcgaaa gatgctttgg
      181 cctctcgccc ctgatatagc cagtacagtc caggcgttgt atatgacagg catatgcggt
      241 tgcaacaatg tgatttgaaa aagcgcctcc gaatgtagca attgaacggt aactatgctt
      301 gttggcgtat tggagatggt attttaattt gaaccattta tttccgctta ccaccggatg
      361 aatgcgatca agcctgagta catcaacgtt gactgcggca tcttctaaaa atttatcatg
      421 taattggtgc acgtaaacat gatccaggcg tatttcatct tctataacca tgttattgcc
      481 gggtattttc acaagttatc tatgacatct ctgtatcctc gcccgattgg aatagaagtg
      541 ccggctacat caaccatttc ggaagtataa gaatcgatct tgccgacgga aacgataaac
      601 gaacggtgaa ttcgtttaaa aagatttggt ggtaaaaggg cttcaatttc atgtgtactc
      661 atttttgtga gatattcttt tttcgttgtg atgatcctga tgtattcgcg ctggctttct
      721 atgtaaacaa tgtctgagaa caagatcttt accttctttt tttgaacatt gagaaataaa
      781 tgatctcgtt gatcttcgct tccctctttc atgggcttcc cagcgatcgc aggcttcact
      841 ttatttaccg cgttcaaaaa cctgtcgaac tcaaaaggct tcaacaaata atctgttacg
      901 ctcaaattaa atccttctac cgcatactga tgataggcag ttgtaatgat cactgcagga
      961 ggattggcca atgttctgag aaatgccatg ccttttaatt ttggcaaatg aatatccagg
     1021 aaaataagat ctgtgtgatt atttcgcaac cagtccgtgg ctgcaattgc atctttaaat
     1081 gtttgttgca gctcaaggaa cggtacctgc gaaatgtaat ccgagagcac tttaactgct
     1141 aatggctcat cttcgattac tatacatctt attttcgaca tggcttgcta aatttatttt
     1201 taagatcgcc gtaaacaccg agtcactctg ttcaactgaa aggtcgtagt ccctgtacaa
     1261 cagctccaac tggcgtctga cgttagccag gccaatagtt tttttcacgc ccttgtctgc
     1321 cggaaacgag tctgttgagt tttttaccac aaaatttaat tgccggttat taacagaaag
     1381 atggatatca acgaaaggat gatcccgtgt ttcagacacg ccatgtttga acgcattttc
     1441 aaccagcggt atgagcagga gtggaggaac ggattgtttc atgtcttcaa catcgtggtt
     1501 aaaatttacg cgcaacgatt catcgtatcg tagtttttcg agtgctatgt agtcgttgat
     1561 aatttttaat tcgtctccga tcgcgatgaa ttgaccgctc gtttcatata acatgaaccg
     1621 tagtatcttc gacaggttca ggatcgattt gggtgcgagg tcgcttttat cccgtgctaa
     1681 cgaataaata ttatttaagg tgttgaataa aaaatgcgga ttcgtttgcg atctcaggta
     1741 gtttaattct gcttcttgtt tctcgatgcg tagctgttgt gctgcttgcc tgagccgtgt
     1801 gtatttataa atgtgcctga tgatcccaaa gaacacaacg ccgccggtgc tatagcccat
     1861 ttgattttga agcgcatcat cttctgttgc ataaactttt agttgcgtgt agatatgtaa
     1921 ttgaatgccc aacaagcgcc acaggtaaga accgtaagaa taaagtatca tgtagaagaa
     1981 aagaaccggt atcgcaataa ggatgttata aataatactt tttctttttt taagcaggta
     2041 agggtttgta tattcaaaaa gaaaataagt aacaatagca acatagataa ctccccagat
     2101 attattaaac acaacggcaa aaaaacgacc cgggtatttt cctatgatcg taaagaaacc
     2161 catcaaaaaa tatccaaggg cgagccagcc ataaagtgcg agctgttctt tcgtaaccga
     2221 tactttcatc ttgtttagat gcaataaata tcggcaaatc tttttccctg aacggcattg
     2281 tctatagaat cgatgttatg gtaatcgggc aacgtgaaaa cgtcaatggg ttgcggaggg
     2341 ttcgcacgga ttgcacggat gcaataccga taatgcatca gttccgatct gtgttgatct
     2401 gcgagacact tcctcactca tcactaacca ctgacggttc tcacagattg cacggatgag
     2461 cacggatatc atcgattggt ggtgggttat gctatctgta aaacataatg ttttgctact
     2521 aacaattaaa gattccatga atgttaacgt tagtgaaact ccgtgccctg gtgtcttcgt
     2581 ggtctctgat cttttgaacc accaggtctc gaagaaacaa agcgaaacca agggaaaata
     2641 aagcgagcag tttaaatcaa tagcacaaca tgctacttaa ttcccatcac tgaccagtga
     2701 tggttctcac agattgcacg gatgctcacg gatatcaggg ggattggtgg gaacaggttt
     2761 cgtcgttggt caggctgcgg caaccgaact ttgtggccat tgtggtccgt tgtggcctta
     2821 gtgttccaaa aatgtcgttc atcacactca aaaatttaat aatccacttg aaagatccgg
     2881 cgcacatcaa ttttcaataa gtaatttgtc cagtttcaac agccggggtt tttgtttgtt
     2941 gttagttgat agaactttcc caagcggttc aaaaattgcg tgcgtgatct gagcccgtct
     3001 ttgctggttc caattttcaa tgctcaattt ttcaatgttc atttgttgtt gccaggctgg
     3061 atcagtgcgg atctgtgttc atctgtgagg cactactcat tactcatcac tgatcactca
     3121 tttatcaaca ttgactgcga aacaccgttt gtctaccgta agccgcattc tgttgacact
     3181 tcgtttatgt gttttgttta atggaatact cttgccgaat aatacacatt tatgaaaaag
     3241 atattagtta tttccttaat gaccgtttgt atttcgacgc acctgcgtgc gcaatctgaa
     3301 cgcgacgcag gcacatggaa aacctggttc atttcatccg gcaaagatta ccggttacca
     3361 gctccccaat cttacaagaa cgaaattgat caggtgcttg ccgcgcagaa aaatttagat
     3421 tctgcaggct ggcagcagat catgtattgg aatgccggat caccgggtta caggtgggaa
     3481 agcataatcc cgatcacctc cgataccagc aacaacggtg ttcttgtgct ggcgaatatg
     3541 ttgctgaaag ttgcgatata tgacgctacc gtcgccgcct ggaacacaaa gtatgcatac
     3601 aatcgtccgc ggccgttcgc agccgacaaa cggataaaat gttttgcgtt gaaaccggaa
     3661 agcccctcgt acccatgcga gtattcggtc gcggccgggg tggcggtaac aattatttct
     3721 catttttatc cgtcatggtc tgattcgata aatcagttgg ctcagcaaca aatgaaatca
     3781 cgcgttgcgg caggcctcgc tttcccggac gatacgcgcg ccggttttga acttggtaaa
     3841 acgatcgccg aaaaagagat cgagcacaca aaagattttg taccaaaaac agcatgggat
     3901 gggaagatgc cggacaaacc gggaatttgg aaaggcaaat ttgcgatgtt tcccctcgca
     3961 gcacacaata agaccgttgt gcttgatagc gcgagtgagt tcaggcccgg ccctcctccc
     4021 gacttcgcaa aagatatggc ggaattaaaa agctttaagc aaacgtttcg ctcaatgtcc
     4081 aatgcattct tttgggcaag ccacgatttt tggagcgata tcctcgacac gaaaatgttt
     4141 gaatacaata ttcagcttga tccgccgcgc gcggcccgct tatatgccat cagtgcgata
     4201 ggactctacg atggttttgt ttcctgcttt gatgcgaagt acgcgtattg gggaattcgc
     4261 cctaatcaat acgataccag ttttcatccg gcccttctgg ttacgccacc gtttcccggg
     4321 tatccgtcgg ggcacgcgac agtgagtgga gtaatggctg aattgtactc atattttttt
     4381 cctgcggaag ctgcttattt caggaagaaa gcgaaagaag gcgccgagtc acggttccag
     4441 gccggcattc attttcgcac cgacaatgaa gtgggtcttg atcttggaag aaaggttgca
     4501 aatgcgatca ttcaaaaagt gaaggacgat ggcgcgggca atgatgtggt gttggcacac
     4561 gaaaatgaca aacaataaag acacttgatt taacgctgct gcttacaaaa ctcttaataa
     4621 atgaaaatgt cagtcaaaca aatggccagg ataggcgggg tattttactt gctgataatt
     4681 cttgccggcg tcatcggcga atttttcgta cgcgcaaaac ttattgtatc agcggatgct
     4741 gttgccaccg caaacaacat tgccggttcg ccgcttttgt ggaggatcgg catcgccggt
     4801 gatcttttta tgcatgtgtg cgatattcct ttagtactca tcttttacat actgctcaaa
     4861 ccggtcagca aaaatcttgc tttgctggca atgctttttg tgctaacgca aaccgccgtt
     4921 ctcatagctt ccaagctgat tctttttatg ccgttgtttc taactagcga cgtcggctat
     4981 ctcaaagtat ttacgccgga tcagcttgat gcattatcat accttgcgat aaggctggat
     5041 gcatacggct ttggagtcgg gctaatattc tttggatttg cctgccttat tattgggcat
     5101 ttgatcgtac gatccggcta tctgccaaaa ttcattggcg tgatgatgca gatcggcggc
     5161 gcgtgctatt tg
//
LOCUS       DASQJI010000744        32262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_568369,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000744 DASQJI010000000
VERSION     DASQJI010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 32262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32262
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_568369"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1080
                     /locus_tag="VEV83_19795"
     CDS             <1..1080
                     /locus_tag="VEV83_19795"
                     /inference="COORDINATES: protein motif:HMM:NF018877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HYK47434.1"
                     /translation="DADSEGVEGKYYTWGIEEVRALLGDESETFCDVFDVSETGNWEQ
                     TNILWMPEPLEKFSDGKMGDWSASLEGSKAKLFEARQQRIRPGLDDKIILGWNALMIK
                     SLCKAYAATGEQQYRQLAEFNISFLEKNLQKNEEPFFYHSWNKKISSQEAFIDDYAAL
                     IQAYLFLQEVTGTTNYLLKAKAIAERVMTEFGDDDTVLFNFTNRTQTDNIIKKREIYD
                     GATPSGNAVMAENLMKLSLLFDVSEWRNRALQMVGGIHDMAVKYPASFGFWCLNLQAL
                     VLGIEEIAILGGNYNQIAVEILAEYTPLKLLQSAANQTDEWPLLRGKPVNEHKTMIFV
                     CENYQCQQPVETVEQFRDIISRKHF"
     gene            1236..2519
                     /locus_tag="VEV83_19800"
     CDS             1236..2519
                     /locus_tag="VEV83_19800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HYK47435.1"
                     /translation="MKNQSFLILLLAVSVIGAVGCGKKGNSKSVAGDGQVHGIAPAAR
                     VGMTKPANMVFVPPGTFHMGPSDEDINYNFTARNKEVSISGFWMDKTELTNNQYRQFV
                     YWVRDSLAAIRLGYVKTSPAGDTAVDWKKASSIKWGDKNTLEKLNDLILTPDNRLYSK
                     MDIDPDMIVYNIQGFNLKEAAKRENAGRPRKDFIYRYDQKIYPDTLCWMRDFSYSYNE
                     PMTKRYFAHPAYGNYPVVGVNWKQAVAFCHWRTRYLNSYLEKNKKAPESDFRLPTEAE
                     WEYAARGGRSQSMFPWGNYYLRNKKGCLLANFKPGRGNYPEDGGFYPVKADSYWANDY
                     GLYNMAGNVSEWTSSLFYEGSYNFQHDMNPDIQWNALDSDPPRMKRKVIRGGSWKDVG
                     YFLQTSTRQYEYQDTTKSYIGFRCVIDLPPQYKKR"
     gene            2582..3346
                     /gene="gldL"
                     /locus_tag="VEV83_19805"
     CDS             2582..3346
                     /gene="gldL"
                     /locus_tag="VEV83_19805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldL"
                     /protein_id="HYK47436.1"
                     /translation="MAAAIPPKVSRIVDMFVSFAAAVVIWGALQKLLHTPSADFFLKL
                     GLGTEALVFSVYGFLYLYYPAIADSSLKPVNETTGNPALKSMEKMLQEADITPTNLGK
                     LSAGFQKLGTTVEKMGEIGDVVKATGDYTQKTKEAAQALDAVKIAYATAANSQTTFNN
                     ASEGAKVFHEQIQTLTKNLSSLNTIYELELQESNQHLKALNQFYGKLNEASATMHTTA
                     DDAVKAKDQIIALANNLGKLNQIYGNMISAMQSGRS"
     gene            3400..4926
                     /gene="gldM"
                     /locus_tag="VEV83_19810"
     CDS             3400..4926
                     /gene="gldM"
                     /locus_tag="VEV83_19810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldM"
                     /protein_id="HYK47437.1"
                     /translation="MALPKEPRQKMINLMYLVLTALLALNVSAEILNAFKTVNNSLTT
                     ASNTIDSKNKTMFESFKELSTNPATADRARVWAPKAETTKRLADQLVTYIEGLKRRVL
                     NEAQYNAQTGDFKEDDLEAPTRVMTDPGKAGDSLHVQLANFKKALLDLDPEIRKQFEK
                     TLPIDLNIPKTNNRANQNDWSASYFYMTPAVAALTILSKFENDVKNSEAMVIDYCHQQ
                     VGAVKIVFNNYEPLVGQSSNYLMPGQELTITAGIGAFNADAKPSVSIDGAPVAINANG
                     VAEYKMTAGGTGSYTKNVVVSYFNQSTGKQEQQSYQLAYTVGSPTGASVSADAVKVFY
                     VGLDNPISVSGGSVGDEKVTVSMTNGTLTKTAPGKYIVRPGKAGTPAEVTVVADGHPT
                     TFPFKVKDVPDPVAKVGANKGGRMRVNDFKAQFGLRADLENFVFEGVKFNVNSYTIVL
                     TGAGFPQLQYQQVSGASFDPVRPLIEKSRPGTTVTIDEIRVTGPGGGRTLPPIVFNLY
                     "
     gene            5018..6034
                     /gene="gldN"
                     /locus_tag="VEV83_19815"
     CDS             5018..6034
                     /gene="gldN"
                     /locus_tag="VEV83_19815"
                     /inference="COORDINATES: protein motif:HMM:TIGR03523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldN"
                     /protein_id="HYK47438.1"
                     /translation="MKKRPTSAYGNNTQQNNPPANNQQRNNASGYGNDTTNNPANSGY
                     GNANTPSAGIDTTLPITVIKSTGNGLLDSTKMSLRNDGAVEHNLVKDRTPLTYEDIRE
                     DDAVFMVRVWREIDAREKINLPFRYSAVEDNGSQRFISILLRAITNGDVTAFSGDDDR
                     FTTPITADEAMNAFGGGSDTAKVYDADGNVVGYQVRAKATDPDSIYKFRIKEEWIFDK
                     ESSRMFVRIIGIAPVIPFKLSTGDIIANSDRPVWWVYYPDLRPILAKYDAYNPKNIGA
                     PMTWEEIFESRMFSSYIVKSSIDNPFDIDLATVYPNNTLFRLLTGEKIKDKIFNYEQS
                     LWSY"
     gene            complement(6145..7977)
                     /gene="uvrC"
                     /locus_tag="VEV83_19820"
     CDS             complement(6145..7977)
                     /gene="uvrC"
                     /locus_tag="VEV83_19820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HYK47439.1"
                     /translation="MTASTFQSIAASLPHQPGIYKYYDEGGELLYVGKAKDLRKRVAS
                     YFTKTFTGYKTYELVNRIARVEITLVNSEQDAFLLENSLIKEFQPRFNINLKDDKSYP
                     YIIIKKEPFPRIFLTRKKIDDGSEYLGPFTSAKKVRELLSFIRQYIPLRTCKLNLTKQ
                     NIERKKFKVCLEYHLGNCKGPCEALQTDDDYKEGLMQVRQMLRGNLSPIISGYKKMMQ
                     EYAASLNFEKAEQVRKKIEHLEQYQARSVIVSKHLNNLDVFTIMKERDVAFVNYLMVQ
                     NGTIIQTHTVELQTNLEENENETLVFAIAQLRQTFNSAAKEIVVPFGIEYPEKDVIIT
                     VSKGGDKLKLLELSQKNALHFREELRRQKQLHLEENDGARRQVLEQLQRELGLQEVPV
                     HIECFDNSNFQGSFPVSAMVCFKNGLPSKKDYRHFNVKTVSGINDFATMREVVHRRYK
                     RLQLEEQPLPQLIIIDGGKGQLSAAIESIEALGLTGKVTVIGLAKNEEEIFFPNDKES
                     IKLSWNSEALNLIRRIRDEVHRFGITFHRKKRSKGTFKNDLESIEGIGEKSATQLLQR
                     FKSVKKIREINLEELTAVVGKSKAKLIHDHLQKKGGVDENPAPF"
     gene            complement(8056..9540)
                     /locus_tag="VEV83_19825"
     CDS             complement(8056..9540)
                     /locus_tag="VEV83_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47440.1"
                     /translation="MNESRHTDELEEYLQHQAGEHKMYPSDRVWKSIRKKIHTPKKWP
                     ALSVFTVLIISALVIGTVLNKPQPDTLTANFTFSLQSPANNTAEKNSTNQIAGQQQIT
                     DEHYSVDEVTTRTIIAAVEKIRIDEAVAMQLQQTGTVAENNQVAFVPATTNATNAIAD
                     KTTITKNDIAEVMPASGTRSSTFTNNFNYYLFDLSSRLKSILSSKPADGRSGGAAFFG
                     SSNHAIAFNDLELNVPRSNTELLPSALEKLSKTSSRFDFRFYATPSISYRRLNEHNTQ
                     QTTSKTEGSTLESNYKVDPSQAINHSPAMGFETGVGLGYKLNKKFTVTGGFQFNISQY
                     KINAFLYKDEPTSVTLDEGNFASTVNTVSSLRSIPGSQPLTIKNRYYQLSMPVGLDWQ
                     ILNGERFSWGLAGSVQPTYTFDKQPLIITSNYKNYADGSPYVRNWNVNTNLETYVGYS
                     TGSYRWQIGPQIRYQLLPSLADKYPNKEYLVNYGLKVGVVKHLK"
     gene            complement(9556..10131)
                     /locus_tag="VEV83_19830"
     CDS             complement(9556..10131)
                     /locus_tag="VEV83_19830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK47441.1"
                     /translation="MTEQAILAGCLNNDPVAQRELYNRYSPKMLSVCYRFAPHREDAE
                     DMLQEGFIRVFTQIQSFRNSGSFEGWIRRIIVHTCINFLKKHKKFNESLDLAYVVNIQ
                     VKEETVPSLMLARQVVECIRLLPVGYRTVLNLYAIEGYSHKEIADMLDIEESTSRSQY
                     TRAKTMLESILVKKRILEKPGEAFTWTAALK"
     gene            complement(10200..12089)
                     /locus_tag="VEV83_19835"
     CDS             complement(10200..12089)
                     /locus_tag="VEV83_19835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HYK47442.1"
                     /translation="MKKGYTMPCGDNRSAKENTLPQNSRYKYFDAGVKKFFLLGLIAC
                     SFVPSSGQSWIRINQLGYPPDKVKVAVLCSKHDISDSAFYLVDSKTKHIVFTGKIKLF
                     FGSYGPFKETCRLDFSAFQKKGSYFLRAADATSPVFSIDDKVYDGTADFCLRYMRQQR
                     SGFNPFLKDSCHTHDGYTLYAPVADSTHIDVVGGWHDASDYLQYSATTANAVYHLLAA
                     YRDFPKIFSDKKQSNGLEGKNNVPDVLDEAKWGLDWLLKMHPKDDWMFNQLGDDRDHR
                     GMRIPKEDTNFYGRGLERPVYFCTGKPQVRGKFMNNTTGVASTAGKFASAFALGSDVF
                     ASINSDYAKKLSFKASTAIAMGFKQPGNCQTASVVSPYIYAEDNWTDDMELACASFLA
                     NPSRLYSNTHTITRELAYQYALQEPVTRWLGADTAKHYQWYPFINVAHYELAKLLTGP
                     QRDTLIDFYKRGIERVWDKAKSNAFFRGIPFIWCSNNLTVSFAIECYWYRQLSHDSSF
                     IQLEEACFDWIFGCNPWGTSMVFGLPAYGDTPVDPHSAFTHLKNYPIDGGLVDGPVYG
                     SIYANLIGIQLYHDDEYKNFQSDLAVYHDDYGDYSTNEPTMDGTACLIYLLAAEQAEA
                     RVSKP"
     gene            complement(12010..13821)
                     /locus_tag="VEV83_19840"
     CDS             complement(12010..13821)
                     /locus_tag="VEV83_19840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYK47443.1"
                     /translation="MKILIHYLKPYRWLVGLALLLAAINQSFSMLDPYYFGKFFDKFL
                     THPFDIGHFDEHKNFVKDAVRTTNQFVWGVLGYLGIFIGVAMVSRIAKAFQDYFTNVV
                     VQKFGAKIFTDGLKHSMLLPFQDFEDQRSGETLSILSKVRADSEKFIVSFINVLFSIV
                     VGVVFVSIYAFSLHWSIMPIYTIGIASLAWLTSVLSKKIKVIQKNIVKETNVLAGSTT
                     ESLRNIELVKSLGLTNQEVDRLNNNTYKILGLELRKVKSIRTLSFIQGTFVNFLRQLI
                     MFTLAWLVFRGQLTAGQVMTLTFYSFFIFGPLQEIGNIIMAYREAEASLINFDNVMKR
                     PAEKKPASPVHIGNLRQLSFNHVSFKHQTAQYKALDNISFVVEQGETIAFVGPSGAGK
                     STLVKMLVGLYHPQNGNVYYNSVDSNDIALEDIRTQIGFVTQDTQLFAGTIKENLLFV
                     NPSAKDDDLLDALYKASCQNLLERADKGIETVIGEGGLKLSGGEKQRLSIARSLLRHP
                     HLLIFDEATSSLDSITEEEITSTIKEISQLKEQITVLIAHRLSTIMHADRIYVLEKGR
                     IIETGTHYELLDEKGLYYAMWRQQIGERKYAASKQPV"
     gene            13973..14671
                     /locus_tag="VEV83_19845"
     CDS             13973..14671
                     /locus_tag="VEV83_19845"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HYK47444.1"
                     /translation="MMKKKLVVLTGAGISAESGLKTFRDSDGLWNGYNIEDVATPRAW
                     KKNKQLVLDFYNMRRQDVLKAEPNAAHVGLAQLENDFDVHVITQNIDDLHERAGSSKV
                     LHLHGEIFKMRSEKNNELVYEIRKDILLGDTAEDGAQLRPHIVWFEEPVPMIEKAAAV
                     ASKAEIFVVIGTSLVVYPAAGLVNYAPWHIPKFIIDRTIPYASLYNVTPIEKPATDGI
                     TELQKMLKALAGSS"
     gene            complement(14879..15190)
                     /locus_tag="VEV83_19850"
     CDS             complement(14879..15190)
                     /locus_tag="VEV83_19850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK47445.1"
                     /translation="MNIYVSNLGFSVQDEDLREYFAEYGEVTSAKVITDKFTNRSRGF
                     GFVEMPDENAAQKAISELNGAVVEGRSISVNVARPREERSNSGGGGGKRSFSGNNNKR
                     W"
     gene            complement(15363..15554)
                     /locus_tag="VEV83_19855"
     CDS             complement(15363..15554)
                     /locus_tag="VEV83_19855"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HYK47446.1"
                     /translation="MANLAKEKLSDDIQMNFNHSKEVAYWAKKYNISPQLFQKAFKES
                     GHSIPKTLEFFNQNLNNAN"
     gene            complement(15592..15885)
                     /locus_tag="VEV83_19860"
     CDS             complement(15592..15885)
                     /locus_tag="VEV83_19860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HYK47447.1"
                     /translation="MMFKDLDPLLHSQLRLAIMSILISVKQAEFIFIREKTNATAGNL
                     SVQIQKLKEAGYIEVIKEFKDNYPNTSCKITPKGIKAFEEYVKTLQFYLQVKK"
     gene            complement(15875..16468)
                     /locus_tag="VEV83_19865"
     CDS             complement(15875..16468)
                     /locus_tag="VEV83_19865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47448.1"
                     /translation="MNNESQLTEQESLELIARMINKAKSDFRETGIGALMWGTIIAVC
                     AVVSFVNYYQHWRWAEYIWFLTFIAVIPQVIISVQANKRKKYTSYNEDAMGGIWISFG
                     IGILLLSFFSSWSHLSNAYVLFLIFYGVPTFATGIARRFTPMIVGGIACWIFAIISMY
                     ATFPYAMLLTAAAAIIAWFVPGIILRKRYLKAKKNDV"
     gene            complement(16465..17046)
                     /locus_tag="VEV83_19870"
     CDS             complement(16465..17046)
                     /locus_tag="VEV83_19870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47449.1"
                     /translation="MKEEQLSAEESLQLINRMIFEARGYFHESGVSALIYGFTVVVCS
                     VLTYLDDTTVLRLPFQPFFIMVPVFVLQVWMHFREEKNKKAKTFTDDAIDFLWMGFFL
                     SVIISLTGFLAGAGYIVITIILFLAGFSAFVTGMIAKFRYHIISGCICLLMAAISFFI
                     QQSMIYFLLAAAATIVWIIPGFMLRIHFRKTSV"
     gene            complement(17052..17651)
                     /locus_tag="VEV83_19875"
     CDS             complement(17052..17651)
                     /locus_tag="VEV83_19875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47450.1"
                     /translation="METTENDFSPQQSLALIESMINRAKDKFAEDGSMYLLWGWLVFA
                     CSLFQFILLHVVEYPKHYLVWLATIPAFVYQFFYIREKRKHQTATTYTDYIIGYIWVT
                     FGVVILLIGFIIGFITGGDYYYHIIPLLLAIYGVPIFLTGVIIRFRSLITGGIVCWVL
                     CIVSTFIRNYDYQFLMVPLAMLAAWIIPGYMLRSKYKSQ"
     gene            complement(17746..18426)
                     /locus_tag="VEV83_19880"
     CDS             complement(17746..18426)
                     /locus_tag="VEV83_19880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47451.1"
                     /translation="MKQFLVALAIIISVTASAQSDKYADAMKQTLALFDSAKTAADFE
                     NVSASFQRIGDVEKTQWLPYYWAAMSLATEGWKYFPDNNGAVSVKTDNLSGAMEALAA
                     RINKLADQADAATTANEDKAEILIVRNMAATQQMLVDPQSRWMTFGQQAGTYLQQASQ
                     LNPNNPRVYYLQGMSLFGTPEQFGGGKAAAKPLFEKAVAMGKAEQQKPLHPHWSLEQS
                     EQMLAQCQ"
     gene            complement(18516..20747)
                     /locus_tag="VEV83_19885"
     CDS             complement(18516..20747)
                     /locus_tag="VEV83_19885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK47452.1"
                     /translation="MKTWMIAAIILTSINSLAQTKISGKIKDTKGKPIPSVSITLKDT
                     YDGAVTDSSGNFTFTTRETGSHTIDVSSLEYDGYQTNVELNGTPITINAELKEKFNEL
                     KAVVVTAGSFEAGDNKRAATVLSAIDVATTAGSNADITAALKTLPGAQQIGNQEGLFV
                     RGGTGEETKQFIDGTLLNNPYYTSVPDIATRGRFSPFLFKGTVFSTGGYSALYGQALS
                     SAVILESIDFPERSAANAIVSPIVLGGGVQQLSKKKNFSWGIDYNYVNVGLYFNLVQQ
                     TPDYYDMPEFHSGDANFRIKTKGGIIKYYTTFNYNHLGLRRPDIDSMIYKDAYSVINH
                     NWYNNLSWRENLGNGWKMNLGMSYSTNRDDLAQQVQDSSNQPKLFNYDPWLNKNFTVK
                     NRQDLAQIKEVFEKKLGGLSAIRFGAEYWYAYNPGTYKNPDSNYVFDLKDNYAAAFAE
                     SDVYITNGVALKIGARYEYSSIIKHADIAPRISLAYKTGPGAQVSLAYGVFYEKPLNN
                     ELIYSTSLGYTKATHYIANYQRSVDNRIFRVEAFYKKYDDLVKSFPYYNNNGTGYAKG
                     VELFLRDKKTFKNIDYWISYSYLDTKRDYLNYPQELEPNFAAHHTASVVMKRFITKWK
                     AGFNVTYSFATGRPYYNFMYDNSSDKYNIADQGRTKNYNNLGFSAEYLPSLGKKDAKT
                     FIVLFASMTNVLNQTQIYGYNYSYNGLNKQPILPPAQRFYFIGMFLSWGIDRSEDAIN
                     NNL"
     gene            complement(20784..21062)
                     /locus_tag="VEV83_19890"
     CDS             complement(20784..21062)
                     /locus_tag="VEV83_19890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47453.1"
                     /translation="MTASQGKEQIPYTGFLAQDVEKVAKRLNYHFSVVDAAKNQHDLY
                     GLGYAEFVVPLKYAQLEIIAAPKPPFIPKKPAFTEMLKIFRKRIWFIL"
     gene            complement(21424..22812)
                     /locus_tag="VEV83_19895"
     CDS             complement(21424..22812)
                     /locus_tag="VEV83_19895"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HYK47454.1"
                     /translation="METTNTFRFKNSQRRTILGVNLCPLSSLLFITLLLGSCQKNMND
                     VPASQTTSPNNSDLQLKKYENTVATDWYKLQLRFLLEKNSVLANGGHFGYIGIGLYES
                     VRNGIPDAVSLSTKLYQMPDMPVAENGKSYNWQISANAAMASLVRSFYHGITTADSLS
                     IDSLENAYNQNTHSNSAQEFTRSQSFGRSIATAVYNWYLTDNINLSNVGYVAPVFAGA
                     WVPTPPAYVNPPVLPYIGNARTFLASDLTGIAPTFPAPYSEDPNSAYYKVAKEVYRVS
                     KHLTTEQQNIALYWIDQGDHVGYTPAGHDMSIATEAIEQTHSNLEQAAEVYAKAGIAE
                     RDASVICFRSKYQYTLVRPVTYIRKFIDTAWMPFIITPPHPEYPAAHAVVTGSVMQAI
                     SGVLGDNVSFTDHTYDFRGWTPRTFQTIFSAAEEAGISRLYGGIHYHVSIDIGLKMAK
                     VIGNRVGTIKLY"
     gene            complement(22905..23210)
                     /locus_tag="VEV83_19900"
     CDS             complement(22905..23210)
                     /locus_tag="VEV83_19900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47455.1"
                     /translation="MKPKIYVFTLSRSILLTFCFLAWSKMDAQNTFPSTGAAGIGTTT
                     PNASSLLEIKSTTKGMLIPRMTLTQRNAIATPATGLLTYQTNSTPGFYYYSGTAWMR"
     gene            23674..24555
                     /locus_tag="VEV83_19905"
     CDS             23674..24555
                     /locus_tag="VEV83_19905"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47456.1"
                     /translation="MRFIAGFLLSYIVGTAINYFTAEWFLIVTAFFPNTFQHRLEMGN
                     YNTRWGMVIATLALGIKLSKNWYIQQKENLEIIKRKSRTEMQSEKAKIHPELLLRSLD
                     NIYDHIQSGSDKAPSLILNLSEVLSYSLYENENIRVLLKNELIQLQHLIALEQQKKEG
                     CLYIEMREKGSSMNTYVAPMVLVKMLEQAITHLYRAGLFSCFVRLNLVEENNTLFSTL
                     SFRHEAGKALCNINWESFITNTRNRLTAHYDPSDFAIELTKYRSEIIVKLQLELSEHG
                     EDKKLIPNNKETAYGDL"
     gene            24968..25627
                     /locus_tag="VEV83_19910"
     CDS             24968..25627
                     /locus_tag="VEV83_19910"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47457.1"
                     /translation="MLKNYYIKMEEKQTLIKETAHAEMQLLKAQVHPHFLFNTLNNIY
                     SFTLNKSPEAGNLVLKLKDTTRYMVYECDTALVPLQKEIKMLKDYVELEKVRYGKRLE
                     TEINVDGKYENKMITPLLMIPFVENSFKHGASKMLRNPWIKLFIQADEDVLHFTLANS
                     KPADKALHARGGMGLRNVKKRLELLYPEDHLLTIETTVNTFTVNMQLPLQKIEIQSAL
                     D"
     gene            25643..26371
                     /locus_tag="VEV83_19915"
     CDS             25643..26371
                     /locus_tag="VEV83_19915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK47458.1"
                     /translation="MLNYKKIICIAVDDEPPALQVIERYIDAIPSLELTASCGNAVEA
                     LTVLQNNHVDLMFLDIQMPHIFGTDFMRTISNPPKVIFTTAFRKYAVEGFDLDAVDYL
                     LKPISFERFLKAINKVMKLNLPVSENVLPPEAPLKDNGNDFIFLRADRKNIKLNLSDI
                     LFVESLKDYIKVVAKDKTIVAKHSISALEENLPPHLFVRIHRSFIVSLNNIDSFTQDL
                     VQIGKYELPISRSYRHEVEKALKK"
     gene            complement(26385..26750)
                     /locus_tag="VEV83_19920"
     CDS             complement(26385..26750)
                     /locus_tag="VEV83_19920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47459.1"
                     /translation="MEQPKTCLQCGKALRGRADKKFCDDYCRNNYNNQLKADSTNYVR
                     NVNHALGKNRRILEDLLPAGEKMTKTTREKLLHHGFSFKYITHKFTNKSGSTYYYCYD
                     HGYLPLDNERYLIVHWREE"
     gene            26935..27294
                     /gene="ssb"
                     /locus_tag="VEV83_19925"
     CDS             26935..27294
                     /gene="ssb"
                     /locus_tag="VEV83_19925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HYK47460.1"
                     /translation="MYALKNKVQLIGNLGNNPEIRTTEAGKKMARFSVATDETYRNSK
                     GEKVTETQWHNLIAWGKVAEIVEKYLSKGSEIAVEGKLMNRNYVDKEGVKRYITEVHV
                     NEMLMLGGDKKQAKAKA"
     gene            27423..28178
                     /locus_tag="VEV83_19930"
     CDS             27423..28178
                     /locus_tag="VEV83_19930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HYK47461.1"
                     /translation="MSYAGKNFKHLRKLRGWTQEEFARKLKIKRSLVGAYEEERAEPR
                     LDILKELCSIFKLSLEELLLKDLGSLRNGGSYIDKRRQQKLEGKLNEIQFVPVKAAAG
                     YLAGYADPEFIDELNTFTLPMLAPGEYRAFEIVGDSMLPTPSGSIIVGEKVENIDDVR
                     ANNTYIVVSKNEGIVYKRIMKNNRYKNKLTLMSDNPQYEPYHVNPEDILEIWRAQMVI
                     TKANTQQRWDVNQLAGLVSNLQEQVSSLKKKMN"
     gene            28282..30750
                     /locus_tag="VEV83_19935"
     CDS             28282..30750
                     /locus_tag="VEV83_19935"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYK47462.1"
                     /translation="MPRQFVLVVFLFSLFVVSARGQSKTVHALKVKSAPKLDGKLDDP
                     VWQGAEAATEFIIKNPDFGKPSAQRTEVKLIYTDEALYIGAHLYDDPKLVRTTLTSRD
                     DYQFQDADYFGIAFDTYHDKQNAFEFIVTSANVQSDIRISSLVASSNGSNSFGQPGFD
                     KNWDAVWDSRTSIANDGWIAEIKIPYSAIRFSKEEIQHWGLNYVRVIRRLNEESYWDP
                     EDPKIDGYVNQFGTLEGLQGIEPPLRLSFLPYISTGYSEVPTNAGTIETFLHSGGMDV
                     KYGINESLTLDMTLIPDFGQVQSDNVVLNLTPYEQQFQENRPFFTEGTELFNKAGVFY
                     SRRVGSTPTKYYDVLDLAEDSGYSIIRNPYLTQLYNATKFSGRTKNNLGIGIFNAVTA
                     PMHAELEKQDGTKFEIETEPLANYNIIVLDQPFNNRSSLTFTNTNVARSGDARDANVS
                     ALDLALFDKKNVYRFQSRNNFSFVKDADPHNGFQTINSLDKVSGKWQWGVKNTIISAD
                     YDPNDLGYLRAPNLFSNSGYLSFYQFTPNEHFNFRKYSISVEHSSYFDPMHYSMFEIR
                     GSFLHVFRNFWDISLNAFSDPFPTDDFYELRTPGRYVKKPQFTFAGLFGSTDSRKKLW
                     VNYGVGYAGLSPVPNDPFFLTNLGARYRFNSKFSLEFSGSRTEDRGNLGWADNDASTG
                     EPFVGLRRILEVTTTMDGVYNFKARMNLSMRIRHYWSNVTYRSFYDVAADGSWIDKPF
                     QEGYDENFNLFNLDMFFTWDFRLGSRLLVAWKNALGPDAGVDGDRYQNYPKNFRQSFH
                     LPHSNELSVKFIYYIDYLQLKRKS"
     gene            complement(30780..31118)
                     /locus_tag="VEV83_19940"
     CDS             complement(30780..31118)
                     /locus_tag="VEV83_19940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47463.1"
                     /translation="MNTNTTFKIDFDYALSENILIRLTATVQPQHSIPHYLVTNFHFR
                     TNPEGSPPLPDISVLALKRQGTISWVHTDSRKETMLSVAVGKAIERTVSVEFANDRQL
                     NADHGSSTHK"
     gene            31400..31714
                     /locus_tag="VEV83_19945"
     CDS             31400..31714
                     /locus_tag="VEV83_19945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47464.1"
                     /translation="MAFDQYHEPPGDLPEKTKTFARMITSMGEEAEAIGWYEQRIAVE
                     KDRTARAIMKNAQKEEFKHFGMDLEFLLRMKPQWREILQGILFKDGDIVEHGDEAEEN
                     AD"
     gene            complement(31749..>32262)
                     /locus_tag="VEV83_19950"
     CDS             complement(31749..>32262)
                     /locus_tag="VEV83_19950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219895.1"
                     /note="catalyzes the formation of biotin from
                     dethiobiotin; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HYK47465.1"
                     /translation="TSADYYGEIITTRTYDDRLQTLEHVRKAGVTVCCGGIIGLGETH
                     DDRIKMLHTLSTMPEHPESVPINALVAIAGTPLADNPRVDNWDMVRMIATARILMPAS
                     MVRLSAGRNSMSIAEQALCFMAGANSIFAGDKLLTTPNPSFEEDNAMFQLLGLKARES
                     FKEEKKLVEA"
BASE COUNT         9086 a         6826 c         7141 g         9209 t
ORIGIN      
        1 gacgccgata gtgaaggcgt tgagggcaaa tactatacct ggggtataga agaagtcagg
       61 gcgttactcg gggatgagag cgaaactttt tgcgacgtgt ttgatgtctc ggagactggt
      121 aattgggaac aaacaaacat cctttggatg ccggagcccc tggaaaagtt ttcggacggg
      181 aagatgggcg actggtctgc aagtttagaa ggatccaagg cgaagttgtt cgaggcaagg
      241 caacagcgca tccggcccgg tcttgatgac aaaataattc tgggctggaa tgcattgatg
      301 ataaaaagcc tttgcaaagc atatgcagcc accggcgagc aacaatatcg tcagcttgca
      361 gaattcaata tctcatttct cgaaaaaaac ctgcaaaaaa acgaagagcc atttttctat
      421 cacagctgga ataaaaagat aagttcacag gaagctttta tcgatgacta cgctgcttta
      481 atacaagctt atctttttct acaggaggta accgggacta ctaactattt attgaaagct
      541 aaagctatag cggaaagagt gatgaccgag tttggtgacg atgacacggt tcttttcaat
      601 ttcaccaata gaactcaaac ggacaacatc atcaaaaagc gggaaatata cgatggagct
      661 actccgtcag gcaacgcagt catggcggag aacctaatga aactgtcttt actttttgat
      721 gtttccgaat ggcgaaacag ggctttgcaa atggttggcg gcatccatga tatggctgtg
      781 aaatatccgg cgtcgtttgg tttttggtgc ctgaacctcc aggcgctggt gcttggtatt
      841 gaagaaatcg ctatcttggg cggaaattat aaccaaatcg ctgtcgaaat tttagcagag
      901 tatacacctt taaaattact gcagtctgct gcaaaccaaa cggatgaatg gcctttgcta
      961 agaggcaaac ctgttaatga gcacaagacc atgatttttg tatgtgaaaa ttaccaatgc
     1021 cagcagccgg tggagaccgt cgagcaattc agggacatca tcagccgaaa acatttttaa
     1081 caaaaagtcc acatgcacaa aataatttaa tcgaaagcac gttcatttag tcttaggcga
     1141 attttaaaga taaaaacctg atacagagaa caatcattaa actttgctcc gaccgtgaac
     1201 cacattattc aaaattgctg aaacagaaat aaaggatgaa aaaccaaagc ttcttaatct
     1261 tacttctagc tgtatccgtc attggagcag ttggctgtgg caagaaaggc aacagtaaat
     1321 ccgtcgccgg cgatggccag gtgcatggaa ttgctcctgc cgccagggtt gggatgacaa
     1381 agcctgctaa catggttttt gttccgcccg gaacttttca tatgggcccc agcgatgaag
     1441 acatcaatta caatttcacc gcgcgtaata aagaggtttc tattagtggt ttctggatgg
     1501 ataaaacgga attgacaaac aatcaatacc ggcaattcgt ttactgggtt agagattcgc
     1561 ttgccgctat ccgtcttggt tatgtgaaaa caagccctgc cggtgatact gctgttgact
     1621 ggaaaaaagc ttccagtatc aaatggggcg ataagaatac cctcgaaaaa ctgaacgacc
     1681 tgattttgac gccggacaac cgtttgtata gcaaaatgga cattgacccg gatatgatcg
     1741 tttacaatat ccagggtttc aatttgaagg aagctgccaa gcgtgaaaat gctggccgac
     1801 cacgcaaaga tttcatttat cgttacgatc aaaaaattta cccggacacg ttgtgctgga
     1861 tgagggattt ctcttactcg tataatgaac cgatgaccaa gcgctatttc gcgcatcctg
     1921 cttatggtaa ctacccggtg gtcggtgtga actggaaaca ggcggttgca ttctgccact
     1981 ggcgcacacg ttatttgaac agctatcttg agaagaataa gaaggcgccc gaaagcgatt
     2041 ttcgcctgcc tactgaggcg gaatgggaat acgctgcacg gggaggccgt tcgcagtcca
     2101 tgttcccgtg gggtaactat tacctgcgta ataagaaggg gtgcttgctc gcgaacttca
     2161 aacctggaag aggcaattat ccggaagacg gtggctttta tcccgtaaaa gctgacagtt
     2221 actgggcgaa tgattatgga ttatataata tggctggtaa tgtttccgaa tggacttcgt
     2281 cattatttta cgaaggttca tacaatttcc agcatgatat gaaccccgac attcaatgga
     2341 acgccctcga ctctgacccg ccccgtatga agcgtaaagt gatcaggggc ggtagctgga
     2401 aagacgtagg atactttctg caaacaagca cacggcagta tgaataccag gacacaacta
     2461 aatcgtatat cggtttcaga tgtgttattg atcttccgcc gcaatacaaa aagagataaa
     2521 cggttttatt aatattcaac tttataacaa tatcctcatc agcatttaaa actttaaaat
     2581 tatggcagcc gcaattccac caaaagtaag ccggatcgta gacatgtttg tatcatttgc
     2641 cgccgcagta gttatctggg gcgcattaca aaagttgctt catacgccat ccgcagattt
     2701 cttcctgaaa ctaggcctcg gtaccgaggc gttggtattt tctgtgtatg gttttttata
     2761 cttgtactat ccagctatag cggactcgtc attgaaaccc gtgaatgaga cgaccggcaa
     2821 tccggccttg aaatcgatgg agaaaatgct gcaggaagcc gatatcacgc caaccaacct
     2881 cggaaagctg agcgcaggtt ttcaaaagct tggaactaca gtggaaaaaa tgggcgaaat
     2941 aggcgatgtg gtaaaggcga ccggcgatta tacgcaaaag acaaaggagg ccgcgcaagc
     3001 actcgatgcc gtaaagattg catatgctac agctgcaaac tcacaaacaa cgttcaataa
     3061 tgcctctgaa ggcgctaagg tttttcacga acagatacag acacttacaa aaaatctgtc
     3121 ttctttaaat accatttacg agctggaatt gcaggaaagc aaccagcatt tgaaagcgct
     3181 taatcagttc tatggtaagt tgaacgaagc ttctgcaacc atgcacacaa ctgccgacga
     3241 tgcagtgaaa gcgaaagacc agatcattgc gcttgcgaac aaccttggca aattgaacca
     3301 gatctatggc aatatgatca gcgccatgca aagcggcagg tcttaatgaa attattttag
     3361 agtaaaacaa ggaagcatcc tgtataaata tcctttatta tggcgttacc caaagagcca
     3421 agacaaaaga tgatcaacct gatgtatctg gtgctgaccg cgctgttagc actgaatgta
     3481 tcagccgaaa ttttaaatgc ttttaagacg gtaaacaata gcttaactac tgccagcaac
     3541 acgatcgatt cgaagaacaa gacaatgttc gagtcattca aagagttgag tactaatcct
     3601 gccacagccg acagggcacg tgtatgggct cccaaggcgg aaacaacgaa gcgtctggct
     3661 gatcagttgg ttacttatat agaaggtttg aagaggcgcg tattaaatga agcgcaatac
     3721 aatgcccaaa cgggtgattt caaagaagat gacctggaag cgccgacaag agttatgacc
     3781 gatccgggga aggctggtga tagcctgcat gtgcaactgg ctaatttcaa aaaggcgctg
     3841 ctcgatttag accctgagat acgcaaacag ttcgaaaaga cgttaccgat cgatcttaat
     3901 attcctaaaa caaataaccg ggcgaatcaa aatgattggt ctgcctccta tttctatatg
     3961 acgccggccg ttgcggcgtt gactatcctc agcaagtttg aaaacgacgt aaagaacagt
     4021 gaagctatgg tgatagatta ttgccatcaa caggtgggtg ccgtgaagat tgtatttaat
     4081 aattatgagc cgttagttgg tcaaagttca aactacctga tgccagggca ggaattaacc
     4141 atcacagcgg ggatcggcgc ttttaacgcg gacgcgaagc cctcggttag tattgacggc
     4201 gcccccgtag ctataaatgc aaatggagtt gcagaatata aaatgacggc aggtggaact
     4261 ggatcgtata cgaaaaatgt tgtggtttca tatttcaatc agtcaacagg gaagcaggaa
     4321 cagcaaagct atcagcttgc gtacaccgtt ggctcgccga ctggcgcgag tgtaagtgcc
     4381 gatgcggtaa aagtttttta tgttggactc gacaacccga tatctgtgag cggaggaagt
     4441 gtgggcgatg aaaaagtgac ggtcagcatg accaacggca cgctcactaa aactgcaccg
     4501 ggcaagtata tagtgcgtcc ggggaaggca ggtacgccag cggaggtgac ggtggtggct
     4561 gatggccatc ctacaacatt tccgtttaag gtcaaggacg ttccggatcc ggttgcgaag
     4621 gttggtgcaa ataaaggtgg gcgtatgcgg gtcaacgatt tcaaggcgca gtttggcttg
     4681 cgtgccgacc tggaaaattt cgtttttgaa ggcgtcaaat ttaatgtcaa cagttatacg
     4741 atcgttttaa ccggtgccgg cttcccacag ctgcaatacc agcaggtgag cggtgcttcg
     4801 tttgatccag tcaggccgct aatagaaaaa tcacggccag gcacgactgt aacgatagac
     4861 gagataagag ttaccgggcc gggaggtgga cgaacattgc caccgattgt atttaatctt
     4921 tattaatatt atcgatatgt ggattaagta tctgaaatac attttaacga ctgtgctgtt
     4981 gttgaatcta atgtatgttt acgctcaaca gcgccctgtg aaaaaaaggc ctacgtccgc
     5041 ctacggtaat aacactcagc agaataaccc gccggccaat aatcagcagc gcaacaacgc
     5101 gtctggttat ggaaatgata caacaaataa tccggctaac tcaggctatg gtaacgcaaa
     5161 caccccgtct gccggcattg acacaacgtt gccaattaca gtaataaaaa gcactggtaa
     5221 cgggttactc gacagtacaa agatgtcttt acgtaatgat ggtgcggtag aacacaatct
     5281 tgtgaaagat cgcactcctt tgacgtatga agacattcgc gaagacgacg ctgtctttat
     5341 ggtgagggtt tggagagaaa ttgatgcaag ggaaaagatc aatttaccgt tccgatattc
     5401 ggcggttgaa gataacggta gccaacgctt tatttcgatt ttgctgagag ccataaccaa
     5461 cggcgacgtt actgctttta gcggagacga cgaccggttt actacgccta taacggctga
     5521 cgaagccatg aacgcttttg gcggcggttc tgacacggcg aaggtatatg atgctgatgg
     5581 taacgtggta ggataccagg tacgcgctaa agccacagac ccggattcga tttataaatt
     5641 caggataaaa gaagaatgga tatttgataa agaaagtagc cggatgttcg tgcgtataat
     5701 aggtatcgca ccggttattc cgttcaagct ttcaacagga gatattatcg cgaacagtga
     5761 ccgtccggta tggtgggtct attatcccga cctgcggccg atcctcgcga aatatgacgc
     5821 ttacaatccg aaaaatattg gcgcaccaat gacatgggaa gaaatttttg aaagccggat
     5881 gttcagcagt tacattgtaa agtcgtcaat cgacaatcca tttgatatcg atcttgccac
     5941 tgtttatccc aacaatactt tgttcagatt actcacagga gaaaagatca aagacaaaat
     6001 tttcaactac gagcagtcgc tttggagtta ttgaagtgcc ggtgattcga ggctatagaa
     6061 attttcctaa aataaaatca aaaaaacttg cataacaaaa ccagttgcat acatttgtaa
     6121 cggtttttca taggatattg gattttaaaa cggggcagga ttttcatcca cgcccccttt
     6181 tttttgcagg tgatcgtgaa tgagttttgc ttttgatttt cctacaaccg cagtaagttc
     6241 ttcaagattt atttccctta tttttttaac cgatttaaac cgttgtaata gttgcgtcgc
     6301 acttttttca ccaatgcctt ctatactttc gaggtcgttc ttaaatgttc cctttgaacg
     6361 tttcttcctg tgaaacgtga taccaaaccg gtgcacttcg tctcttatgc ggcgaattaa
     6421 atttagtgct tcactattcc acgaaagttt gatcgactct ttgtcattcg gaaaaaaaat
     6481 ttcttcctca ttttttgcaa gcccgatcac agttacttta cccgtgagac ccaatgcttc
     6541 aatgctttcg atcgctgcac tcaattgacc tttgcctcca tcgataatga tcaactgggg
     6601 taatggttgc tcttccaact gcagtcgttt atatcttctg tgtacaactt ccctcatcgt
     6661 tgcaaaatcg tttatgccgc tgacggtctt cacattgaaa tgcctgtaat cttttttgct
     6721 gggtaaaccg ttcttaaagc ataccatcgc cgaaacaggg aagcttccct ggaagtttga
     6781 gttgtcaaaa cattcaatat gtacaggtac ttcctgcaag ccaagttcac gctgaagttg
     6841 ttctaacacc tggcgtcgtg ctccatcatt ttcttccagg tgcaattgtt tctgtcttcg
     6901 taattcctcg cgaaagtgca aagcattttt ttgagaaagt tcgagcaact ttaatttatc
     6961 accgcccttc gacacggtta tgatcacatc cttttcagga tattcaattc cgaagggaac
     7021 aacaatttct tttgcagcgc tgttgaatgt ctgccttagc tgcgcgatcg cgaaaacgag
     7081 tgtctcattt tcgttttctt caaggtttgt ctgcagttct accgtatgcg tttgaatgat
     7141 ggtgccattc tgaaccatta aataattgac gaacgcaaca tcgcgttctt tcatgatggt
     7201 aaacacgtca agattgttca ggtgcttact cacaattacc gaacgtgcct ggtattgctc
     7261 aaggtgctcg atctttttcc gtacttgttc cgccttttcg aaattcaggc tcgctgcata
     7321 ttcctgcatc attttcttat atcctgaaat aattggagac aggtttcctc taagcatttg
     7381 gcgcacctgc atcagacctt ctttataatc gtcatccgtt tgcagcgctt cgcaaggccc
     7441 tttgcaattg cctaaatgat actcgaggca tactttgaat ttttttcgtt cgatattttg
     7501 tttggttaaa ttgagcttgc aggtgcgaag cggaatatac tgtcgtatga aacttaaaag
     7561 ctctctcact tttttggcag aggtaaaagg cccgaggtat tccgaaccat cgtcaatttt
     7621 tttcctggtg agaaatattc ggggaaacgg ttcttttttg ataataatgt agggatatga
     7681 tttatcatcc ttcaggttta tattgaaccg cggctgaaat tccttgatca gcgaattctc
     7741 cagcagaaaa gcatcctgtt ccgaattgac cagtgtgatc tcaactcggg caattctatt
     7801 tacgagctca tacgttttat aaccggtgaa cgtttttgta aaataagatg ctacgcgttt
     7861 tcgcaggtct tttgctttcc caacatataa tagttcgcca ccttcatcat aatacttgta
     7921 tatgccgggc tgatgcggaa gggaagcggc gatcgattga aatgttgaag cggtcataac
     7981 tgcaaatgta gttttcagca gaaaagattt gtcgtctgcc aattggtttt aataaaccgc
     8041 taagaaaccg gagatctatt tgagatgttt aacaactccg accttcaggc cgtagttaac
     8101 aaggtattct ttgttggggt atttgtcagc aagcgaagga agtaactggt agcgtatttg
     8161 tggaccaatt tgccaccggt agctgccggt actgtagcca acgtaagttt caagatttgt
     8221 attcacattc cagttacgaa catacggcga gccgtcagcg tagtttttat aattggaagt
     8281 aatgatgagc ggttgcttgt caaaagtgta cgtaggttgc accgaaccgg caagtcccca
     8341 actgaatcgt tcgccattta gtatttgcca atcaagacct accggcatgg agagctggta
     8401 gtaacgattt ttaatcgtga gtggttgact acccggaatg cttcgcaggc tggagacggt
     8461 atttacggtg cttgcaaagt ttccttcatc cagtgtcacc gacgttggct cgtctttata
     8521 cagaaatgca ttgatcttat attggctgat gttgaactgg aaaccaccgg ttactgtgaa
     8581 ttttttgttc agcttgtaac cgaggccgac gccagtttca aaacccattg cgggggaatg
     8641 attgatagct tgcgacggat caactttata gtttgactcc agcgtagagc cttctgtctt
     8701 cgatgttgtt tgttgtgtat tatgctcatt gagcctgcga taactgatag aaggtgttgc
     8761 ataaaacctg aaatcaaaac gcgacgacgt tttactcaat ttttcaagtg ccgaaggaag
     8821 taattcagtg ttcgagcgcg gaacatttag ttcaagatca ttgaaggcaa ttgcatggtt
     8881 ggaggagcca aaaaatgccg ccccgccgct tctgccatca gcaggtttac tgcttaaaat
     8941 gctttttaac ctcgaggaca gatcaaagag gtagtaattg aagttatttg tgaacgtcga
     9001 tgaccttgtg ccgcttgcag gcatcacttc ggctatgtca tttttggtta tggttgtttt
     9061 atcagcaatt gcgttggttg cgtttgtggt tgcaggaacg aaggccacct ggttattttc
     9121 agccacagta ccggtctgct gtagctgcat cgccacggct tcgtcaatcc tgatcttttc
     9181 aacggccgcg ataatagttc tcgttgttac ctcgtcaaca gaataatgtt cgtctgttat
     9241 ttgttgttgg ccagcaattt gatttgtcga atttttttcc gcggtgttat tggccggact
     9301 ttgcagagaa aaagtaaagt tcgccgttaa cgtgtcaggt tgcggtttat tcaaaacagt
     9361 accgatcaca agggcagaaa taataaggac tgtaaaaaca gatagcgccg gccatttttt
     9421 tggcgtatgg atctttttgc gaatgctctt ccatacgcga tcagacggat acatcttgtg
     9481 ctcacccgcc tggtgttgca ggtattcttc caactcatct gtatggcggg actcgttcat
     9541 acgtttagtc gtgctttatt tcaatgccgc tgtccatgta aatgcttctc ctggtttttc
     9601 aagaatcctc tttttcacta agatcgattc aagcatggtt ttcgctcttg tatactgact
     9661 ccggcttgta ctttcttcta tgtccagcat gtcagcgatt tctttgtgcg aataaccttc
     9721 aattgcgtaa aggttgagga ctgttctata cccgaccggt aataatcgta tgcactctac
     9781 cacttgtctt gccagcatta atgaaggaac agtttcttct ttaacctgga tattcaccac
     9841 ataagctaag tcgaggcttt cgttaaattt tttatgcttc tttaaaaaat taatgcaggt
     9901 atgaacaatt atccgtctta tccagccttc gaaagaacct gagttgcgaa aagactgtat
     9961 ctgggtgaac accctgataa atccttcctg cagcatgtcc tcagcatcct cgcgatgcgg
    10021 tgcgaaacga taacacactg aaagcatctt cgggctgtac cggttgtata gctcccgttg
    10081 tgccacaggg tcattattta ggcagccggc taagatggcc tgttctgtca tgcaggtaaa
    10141 ttaattaccc accaaggtag acaaaattta tattcgaaat gctgcaaatc aaaaatgttt
    10201 catggtttgc tgacccttgc ctcagcttgt tcggcagcca ataaatagat gagacatgcc
    10261 gtaccatcca tggtaggttc gttggtactg taatcgccat aatcatcgtg atatactgca
    10321 agatcactct gaaaattctt atactcatcg tcgtgatata gttgtatgcc gataagattg
    10381 gcgtagatgc ttccataaac cgggccgtca acaaggccgc catcaattgg atagtttttc
    10441 aaatgcgtga aagcagaatg cggatcaacc ggcgtatcgc cataagcggg caaaccaaat
    10501 accatgcttg tgccccatgg attacatcca aagatccaat cgaagcaagc ctcctcaagt
    10561 tgtatgaaac tgctgtcatg tgatagttgc cggtaccagt aacattcaat cgcaaaactt
    10621 accgtcaggt tgttgctgca ccaaataaaa ggtatgcccc tgaagaacgc attcgatttt
    10681 gctttgtccc acacgcgttc aattccccgt ttgtaaaagt cgatgagggt atcacgttgc
    10741 ggacccgtta atagtttcgc gagctcataa tgcgctacat taatgaacgg ataccattga
    10801 tagtgctttg ccgtgtcagc gccaagccat cgagtaaccg gttcttgcaa cgcatattga
    10861 tacgcaagtt ctcttgtgat cgtgtgggtg ttcgaataaa gcctcgatgg atttgccaaa
    10921 aaagatgcgc aagcaagttc catatcatca gtccagttat cttccgcata gatataaggc
    10981 gaaaccacag atgcggtttg gcaatttccc ggctgcttaa atcccatcgc aattgccgtt
    11041 gacgctttaa aacttaattt ttttgcataa tcggaattta tggaagcaaa cacgtcgctg
    11101 cccaatgcaa acgcgcttgc aaactttccg gctgtcgatg ctacgccagt cgtattattc
    11161 atgaattttc cgcgcacctg cggcttgcct gtgcagaaat aaaccggccg ctcgaggcca
    11221 cggccgtaaa aatttgtgtc ctctttcggg atgcgcattc cgcgatgatc tctgtcgtcg
    11281 cccagttggt tgaacatcca atcgtccttc ggatgcattt tcaataacca gtcgagtccc
    11341 cactttgctt catccagcac atcgggaaca ttattttttc cttccaaacc attcgactgt
    11401 tttttgtcag agaatatttt tggaaagtcg cggtatgcgg caagcagatg ataaaccgca
    11461 tttgcggtgg ttgccgaata ctggaggtaa tcactagcat catgccatcc gcctacgaca
    11521 tcaatatgcg tgctgtccgc cactggcgca tacagcgtat agccatcgtg tgtgtggcaa
    11581 gaatctttta aaaaaggatt gaagccgctg cgttgttgac gcatatagcg caggcaaaaa
    11641 tcagcggtac catcatatac tttatcatcg attgaaaaca ccggcgatgt tgcatccgcc
    11701 gcacggagga aataacttcc ctttttttga aaagcagaaa agtcgagacg gcacgtttct
    11761 ttaaatggtc catagctgcc gaaaaagagc ttgatctttc cggtaaagac aatgtgtttg
    11821 gtttttgaat cgaccaggta aaacgcagaa tctgagatat catgtttgct gcaaagcacc
    11881 gcgaccttca ctttgtccgg cgggtacccg agctggttta tcctgatcca tgactggccg
    11941 gatgaaggca cgaatgagca ggcgatcaaa ccaaggagaa agaatttttt aacgccggca
    12001 tcaaaatatt tataccggct gttttgaggc agcgtatttt ctttcgccga tctgttgtcg
    12061 ccacatggca tagtataacc ctttttcatc gagcagttca taatgtgttc ccgtctcaat
    12121 gatccttcct ttttcgagca cataaattct gtccgcatgc atgatggtgc ttaagcgatg
    12181 ggcgattaaa acagtgatct gttccttgag ctgagaaatt tctttgatcg ttgatgtgat
    12241 ctcttcttcg gtgatcgaat caagcgatga tgtggcttca tcaaagatca gcaaatgcgg
    12301 atggcgaagc agcgagcgtg cgatgctcaa acgttgtttc tcaccaccac ttaactttag
    12361 gccaccctcg ccgataaccg tctcaattcc tttatctgcc cgttctaata gattctgaca
    12421 actcgctttg tataaagcat ctaacagatc gtcatctttt gccgacgggt tcacaaacag
    12481 caaattttct tttatcgtgc cggcgaacaa ttgcgtgtct tgtgttacaa agccaatttg
    12541 tgttcgaata tcttcgaggg ctatatcgtt actgtcaacg ctattgtaat aaacatttcc
    12601 gttttgcgga tgatataaac cgaccagcat ttttacaagc gtgctcttgc ccgcacctga
    12661 agggcccaca aacgctatgg tttcgccttg ttcaacaaca aaactaatat tgtcgagtgc
    12721 tttatattgc gccgtttgat gcttgaaaga aacatgatta aagctcagtt gccgaaggtt
    12781 gccgatgtgt acgggtgatg ccggcttttt ttcggccggt ctcttcatca cattatcgaa
    12841 atttattaat gatgcttccg cttcacgata agccattatg atatttccga tttcctgcaa
    12901 cgggccaaaa ataaaaaatg agtaaaaggt caaagtcatt acttgtcctg ccgttaactg
    12961 gcctctgaat acaagccacg ctaaagtgaa catgatcagc tgtcgcaaga agtttacaaa
    13021 tgttccctgt ataaagctta aggtccttat actttttacc ttccttaatt caaggcctaa
    13081 tattttataa gtgttgttgt tcagcctgtc aacttcctgg tttgtcaatc ctaaactttt
    13141 caccagttca atattgcgta aggattctgt tgttgagcct gccaaaacat ttgtttcctt
    13201 aacgatattt ttttgaataa cttttatttt tttgctcaaa acactggtca gccaggcaag
    13261 cgaagcaata ccaatcgtat aaattggcat gattgaccaa tgcaggctaa aagcataaat
    13321 actcacaaac acaacgccta ccacaatact gaataatacg tttataaatg acacgatgaa
    13381 cttctcacta tcggccctga cctttgataa aatagaaagt gtttcaccgc ttcgctggtc
    13441 ctcaaaatcc tggaatggca gaagcataga atgcttcaat ccgtcggtga agatttttgc
    13501 gccgaatttt tgcaccacaa catttgtgaa ataatcctgg aatgcttttg cgatccttga
    13561 aaccatcgcg accccgataa aaattccaag gtacccgagc acaccccaca cgaattgatt
    13621 tgtcgttctt actgcatctt tcacgaaatt tttatgttca tcaaaatgcc caatatcgaa
    13681 tgggtgcgtc agaaacttgt cgaaaaattt cccgaaataa tagggatcaa gcattgaaaa
    13741 actttgattg atagccgcaa gtaaaagggc caggccaacc aaccacctgt atggtttgag
    13801 ataatgaatt aaaattttca ttgactatct ttttcatgcg cttgccggcg catcatttta
    13861 atttttatgc agaaaactgc aaattagtag ttttaaataa ttgactgaat aaccaggatc
    13921 gcggaaggag ttaaaaatac aacgcccgat caagacgctt ttttaatttt atatgatgaa
    13981 aaagaaattg gtggttttga ccggtgcggg catcagtgcc gaaagcggct taaaaacatt
    14041 tcgcgacagc gatggtttat ggaacggcta taacatcgaa gacgtggcta cgccgcgggc
    14101 ctggaaaaag aataaacagc ttgtgcttga cttttacaac atgcggcgac aggatgtgct
    14161 gaaggctgaa ccgaatgcgg cacacgttgg ccttgcgcag ctggaaaatg attttgatgt
    14221 acatgtcatc acgcaaaata tcgatgacct gcatgaaagg gctggcagtt caaaggtgtt
    14281 gcacctgcac ggagagatct ttaaaatgcg gagcgaaaaa aataacgaat tggtctatga
    14341 aataagaaaa gatattttac tgggtgacac agcggaagat ggtgcccaac tgaggccgca
    14401 tatcgtctgg ttcgaagagc cggtccctat gattgaaaaa gctgctgcag ttgcgtcgaa
    14461 agcggagata tttgtggtta tcggtacgtc gctggttgtt taccccgccg cagggcttgt
    14521 caattacgct ccgtggcata taccgaagtt tataatcgac agaaccattc cctacgcttc
    14581 tttatataat gtaacgccga tcgagaagcc ggcaaccgac ggtattacag aactgcaaaa
    14641 aatgctaaaa gccctcgccg gttcaagcta agttgttttt atacactctg gaaaaagagt
    14701 ggtcttatta gatagcgtta gatagcgggc aacgctgacg aagaaaagat tttttgcgcg
    14761 ggaaaagaac ggttttccat aattgtgtaa actggtttgg cgatgcccta tcgcttcaaa
    14821 taaataaaaa agagagcccg tcaaatgaac tctcttgttc taattcagtg catcaaaatt
    14881 accatctctt gttgttgttg ccgctaaaag atcttttgcc gccgccgccg ccgctgttag
    14941 atctttcttc gcggggacgc gctacgttaa cgctaattga cctgccttca actacagctc
    15001 cattgagctc gctgatggct ttttgcgccg cattctcgtc cggcatttca acaaacccaa
    15061 aaccgcggct gcgattcgta aatttgtcgg taattacttt tgcagaagtg acttcgccat
    15121 actctgcaaa atattccctc aggtcttcat cttgcacgct gaagcccaaa ttggaaacat
    15181 aaatgttcat gtgttgttat ttaaattaaa aaaattgtct gagaaaattg acgttgtaaa
    15241 gaaggaatgt aactattagc agaaactctg tagcagaaaa tcattcaatt actaggacga
    15301 taaactcaaa tacgctgcaa atataatgct tttgtcttta accgttggca gttttccgta
    15361 ggttaatttg cattgttgag attctgatta aaaaattcga gggtttttgg gatcgagtgg
    15421 ccgctttctt tgaaagcttt ttggaacagt tgcggagaga tattgtattt ttttgcccaa
    15481 tacgcaactt ccttggagtg attgaaattc atttgtatat cgtcactcag tttttctttt
    15541 gccaggttag ccataattaa tgtttgaggt ttaaattcaa attgtgtgcc tttatttttt
    15601 tacctgtaaa tagaactgca aagtttttac atactcttca aaggctttga tcccctttgg
    15661 ggtgatcttg caactggtat tggggtagtt gtctttgaac tcttttatca cttcaatata
    15721 gccggcttct ttcagctttt gtatttgcac gctcaaattc ccggcagtag catttgtctt
    15781 ctccctgata aaaataaatt cggcctgctt cacgctgatg agaatactca tgatagcgag
    15841 cctaagctgc gagtgcaaca atggatccag gtccttaaac atcattcttc tttgctttca
    15901 aatatctttt tctcaaaatg ataccgggga cgaaccaggc tatgatggcg gcggctgcgg
    15961 taagcagcat cgcataagga aatgttgcgt acatgctgat gatggcgaat atccagcacg
    16021 cgatgccacc aacgatcatg ggtgtaaatc tccttgcgat cccggttgca aatgtgggta
    16081 cgccatagaa aatcaggaac aaaacatatg catttgacag gtgagaccat gacgaaaaaa
    16141 aggacaacaa taaaatgccg atgccgaagc ttatccagat gccacccatc gcatcttcgt
    16201 tataggatgt atattttttt cttttgtttg cctgcactga gatgatgacc tggggaatca
    16261 ctgctataaa ggtcaggaac cagatgtact cagcccagcg ccaatgctgg taataattaa
    16321 caaatgacac aactgcacaa acggcgatga tcgttcccca catcaacgcg ccgatcccgg
    16381 tttcccgaaa gtcagactta gccttgttga tcatgcgcgc aataagctcg aggctttcct
    16441 gttcggttaa ttgagattcg ttgttcatac gcttgttttt ctaaaatgta ttcttagcat
    16501 aaaaccggga atgatccaaa caatagtcgc cgctgcggcc aaaagaaaat aaatcattga
    16561 ctgctgaata aaaaaagaga tcgccgccat aagcaggcag atgcaaccgg aaataatgtg
    16621 gtaacggaat ttggcgatca tgcctgttac aaacgctgaa aaaccggcca ggaataagat
    16681 gatagtaata acaatgtaac ctgcacctgc taaaaatccc gtgagcgaaa tgatcaccga
    16741 caggaaaaat cccatccaca aaaaatcaat ggcatcatcc gtgaaagttt ttgctttctt
    16801 gtttttctcc tccctgaaat gcatccacac ctgcaggaca aaaaccggga ccatgataaa
    16861 gaatggttga aatggaaggc gcagcacggt agtgtcatcg aggtaggtga gcacggaaca
    16921 tacgacgacc gtaaagccgt aaataagggc agagacgccg ctttcatgaa aatagcccct
    16981 ggcttcaaat atcatgcggt taataagctg caggctttct tcagccgaca attgttcttc
    17041 tttcatactt attattggga tttatatttt gaacgtaaca tataacccgg aatgatccag
    17101 gcggccagca tcgccagggg caccatcaaa aactggtagt catagttacg gatgaacgtt
    17161 gacacgatgc ataacaccca gcatacaata ccgccggtga tgagagaccg aaaacgaatg
    17221 atcactcccg ttaaaaagat cggcacacca tatatagcaa gcaacaaggg aatgatatga
    17281 tagtaataat ctccaccggt gataaaccct attatgaatc cgatcagcag tattacaaca
    17341 ccgaaagtca cccatatgta gccaataata taatctgtat aagttgtagc ggtttggtgt
    17401 ttacgctttt ccctgatata aaaaaactgg tacacaaaag caggaattgt cgccagccaa
    17461 acaagatagt gtttcgggta ttccaccaca tgcaataata taaattgaaa aaggctgcat
    17521 gcaaatacaa gccagcccca cagaaggtac atcgaaccgt cttcggcaaa tttatcttta
    17581 gcacggttga tcatgctttc aataagtgcc aaactttgct gcggcgagaa atcgttttct
    17641 gtagtttcca tggaaagatt ttaagaatgt cgcacaaagc taacagagac cagagaggga
    17701 atgtaaaaac tctattgctc cgttgtcgct gtgcgaagaa aatatttact ggcactgggc
    17761 aagcatttgt tcgctttgct ccaaactcca atgcgggtgc aaaggttttt gttgctcggc
    17821 tttgcccatt gcaacggcct tttcaaataa aggttttgcc gcagccttcc caccgccaaa
    17881 ttgttcaggt gttccaaaca agctcatgcc ctgaagataa taaacgcgtg gattgttcgg
    17941 gtttaactgc gatgcctgct gaaggtaagt gccagcctgc tgaccaaaag tcatccatct
    18001 gctctgcgga tctacgagca tttgctgtgt cgctgccatg ttcctcacaa ttaggatctc
    18061 tgctttgtct tcgtttgccg ttgttgctgc atctgcctga tcggccaact tattgatcct
    18121 tgcggcaagc gcttccatag cacccgatag attatccgtt tttactgata ccgcaccatt
    18181 gttatcagga aaatatttcc agccttcagt ggcaagcgac attgcggccc aataataagg
    18241 cagccattgc gttttttcca catcgccgat gcgttgaaaa gaagcggaga cattttcaaa
    18301 gtctgccgcc gttttggctg agtcgaaaag tgcaagagtt tgtttcatcg catctgcata
    18361 tttatcactt tgcgcagatg ctgttaccga gatgatgatc gctaacgcga cgagaaactg
    18421 tttcatttga tgatgtttat tgtttgtttt ttgtgatttg gaatttgtga tttggaactt
    18481 gggatttgga acctgggatt tgaaatttga gatttttaca agttattatt aatagcatct
    18541 tcactccggt cgatccccca actcaaaaac atgccgataa aataaaatcg ttgtgcaggc
    18601 gggagtatcg gttgtttatt taagccgtta taagaataat tatatccata gatctgcgtt
    18661 tgattcagca cgttggtcat acttgcgaac aacacaataa acgtttttgc gtctttcttg
    18721 ccaaggctcg gcagatactc tgcgctaaat cccaggttgt tgtaattttt tgtgcgtccc
    18781 tggtcggcta tattgtattt atcagatgag ttatcgtaca taaaattgta gtatggccgc
    18841 ccggttgcaa aactgtaggt tacattaaac cctgctttcc attttgtgat gaagcgtttc
    18901 attacaaccg acgctgtgtg atgagctgca aagttgggct caagctcctg cggataattg
    18961 agataatctc ttttagtatc caggtaagaa tagctgatcc aatagtctat attcttgaaa
    19021 gtttttttgt cacgcaggaa taactcgaca ccctttgcgt aacctgttcc gttgttgtta
    19081 taatagggga agcttttcac caggtcgtca tattttttat aaaaagcttc cacgcgaaat
    19141 atcctgttat caaccgagcg ctggtagttt gcgatataat gcgttgcctt tgtatagcca
    19201 agcgacgtac tgtatattaa ttcattgttc aatggcttct catagaaaac gccataagca
    19261 agcgagacct gtgcgcctgg tccggtctta taggcaagcg atatgcgtgg tgctatgtca
    19321 gcatgtttga tgatcgatga atattcatag cgtgcgccga tcttcaaagc aacaccgttc
    19381 gtaatgtaca cgtcgctttc tgcgaatgcg gcagcataat tatctttcag atcaaagacg
    19441 tagttgctgt cgggattttt gtaagtgccg gggttatacg cgtaccaata ttcagcacca
    19501 aaacgaattg cacttaagcc accaagcttc ttttcaaaaa cttctttgat ctgtgcaagg
    19561 tcctgccgat tttttaccgt gaaattttta ttcagccacg gatcgtagtt aaatagtttc
    19621 ggttggttgg atgaatcctg cacctgctgc gcaagatcat cgcgatttgt gctgtagctc
    19681 atgccaaggt tcatcttcca tccattgcca agattttctc tccagctgag attattatac
    19741 cagttatggt tgataacgct gtaggcgtct ttatagatca tactgtcaat atccggtctg
    19801 cgcaaaccga gatggttgta gttgaacgtt gtgtaatatt taatgatgcc gccttttgtt
    19861 ttgatgcgga agtttgcatc acccgaatga aactcgggca tgtcataata gtctggcgtt
    19921 tgttgtacca ggttaaaata aagcccaacg ttcacatagt tataatcaat gccccatgaa
    19981 aagtttttct ttttcgaaag ttgctgaacg cctccgccga gaacgatcgg cgatacgatc
    20041 gcatttgcgg cagatctttc ggggaagtcg atcgactcaa ggatcactgc tgaagataag
    20101 gcctgtccat agagcgctga atatccaccg gtagaaaata cagttccttt gaaaagaaaa
    20161 ggagagaagc gcccgcgtgt tgcaatatca ggaacgctcg tgtaataagg attgttcaac
    20221 aacgttccat cgatgaactg tttagtctcc tcgcctgtgc cacctctgac aaataatcct
    20281 tcctggttgc cgatctgttg tgcgcctggt aaagttttta aggccgcggt aatgtctgcg
    20341 ttagagcccg ccgttgtagc aacgtcaatg gcacttaaaa cagtcgctgc ccgtttgttg
    20401 tcgccggctt caaatgaacc cgctgttacg acgactgctt ttagctcgtt gaatttttct
    20461 tttaactcag cgtttattgt tatcggcgtg ccattcagtt caacgtttgt ttggtacccg
    20521 tcgtattcga ggctgcttac atcaattgta tgacttcctg tttctcttgt agtaaaggtg
    20581 aaattgccgg atgaatcggt tacagctcca tcataggtgt cctttaaagt tatgcttacc
    20641 gatggaatgg gttttccctt cgtatctttt attttcccgc tgatcttcgt ttgagcaagc
    20701 gagtttatgc ttgtgagaat tatcgccgcg atcatccacg ttttcatggc tgttttttca
    20761 tttgatcaca aacgtagact agtttataat ataaaccaaa tccttttacg aaatattttt
    20821 agcatttcgg tgaacgcagg ttttttgggg atgaatggag gttttggggc ggcgataatt
    20881 tccagctgag catactttaa cggcacaaca aattctgcat accctaagcc atacaaatca
    20941 tgttgattct ttgcagcatc aacaacactg aaatgatagt tcagcctctt tgccactttc
    21001 tctacatctt gggctagaaa accggtataa ggaatttgct cttttccttg actagcagtc
    21061 aaatctttct tttccgggct ctattttttt cccattctta tcttttattt cggagcgttg
    21121 tataatcttg tccattgtcg agaatgccat cgctgaaacg cgtgtcgccg tcccaaggta
    21181 tagtgaacac tgtttaccgt aaaagactca atcggtagca gaagtaacca acgtagaaga
    21241 atgttgttgt ttttgaccgc ggtcgtcacg aagcgctgtg aacgagggta gaattttttt
    21301 tgagaataat ttttgatgat ggtttatcta attgaccatc ccgccatgtt tatacagcgg
    21361 gatggccaac caaattattt ttgattcata ttatactggg gtgcactttt tcaatccaat
    21421 gtatcaatac aattttatcg ttccaaccct gttcccaatg acctttgcca ttttcagccc
    21481 aatgtctatg gaaacatgat aatgaatgcc cccgtacaaa cgtgatattc ccgcttcctc
    21541 ggctgcagag aatatggtct gaaatgttcg cggggtccag cccctgaaat catatgtgtg
    21601 atctgtaaaa cttacattat cgccgagtac acccgatatg gcctgcataa cagagcctgt
    21661 taccacagca tgagcggcag gatattcagg atgcggaggt gtaataatga aaggcatcca
    21721 cgcagtgtca ataaacttcc tgatatacgt tacaggtctt acaagcgtgt attggtattt
    21781 tgacctgaaa caaatgacgc tcgcatctct ttccgctatg cccgcttttg cataaacttc
    21841 cgcagcttgc tcaagatttg aatgagtttg ttcgattgcc tccgtggcga tcgacatatc
    21901 atgccccgcg ggcgtatagc caacatggtc accctggtca atccaataca aggcaatatt
    21961 ctgttgttcg gtagttaaat gtttagaaac acggtatact tctttggcaa ctttataata
    22021 ggctgaattt ggatcttctg agtacggtgc aggaaacgta ggagcaatac cagttaagtc
    22081 ggaggcaaga aacgtgcggg cattgcctat ataaggaagc acgggcggat ttacataagc
    22141 tggtggagta ggcacccatg ctccggcaaa aaccggcgct acatagccaa catttgaaag
    22201 attgatgttg tcagtcaaat accaattata gaccgcggtg gcaatgcttc gcccaaaaga
    22261 ttgcgaacgt gtgaattcct gggcgctatt tgaatgcgtg ttttggttat atgcattttc
    22321 gagcgagtct atactaagtg aatctgctgt tgttatgcca tggtaaaagg agcgcaccaa
    22381 acttgccatt gccgcattag cactgatttg ccagttatag cttttgccat tttctgcgac
    22441 tggcatatca ggcatctggt acaattttgt tgacaggctt actgcgtcag gaataccatt
    22501 acgcaccgat tcatataatc cgataccaat ataaccgaaa tgtcctccgt ttgcgagtac
    22561 agaattcttt tcgagcaaaa agcgtagctg tagtttgtac cagtcggtgg cgactgtgtt
    22621 ttcgtatttt ttaagttgca aatctgagtt attaggcgac gtggtttgac ttgccggcac
    22681 gtcgttcata tttttttgac aactgcccag cagtaacgta ataaataata aagaagatag
    22741 cgggcaaaga ttcactccta agattgtgcg ccgctgcgaa tttttaaagc gaaatgtgtt
    22801 tgttgtttcc atgatttttt gatttagttt ttattagata aagagttcaa tacttatttg
    22861 ccggtaaaca agcgaagctc aaaggccatg ctttgattta ggtgttaccg catccatgca
    22921 gtgccagagt aatagtaaaa cccgggtgtg ctgttggttt gataggtaag caagcctgtt
    22981 gccggtgttg caatagcatt gcgttgtgtt agagtcatgc gcggtataag catacccttt
    23041 gttgtagact ttatttcaag cagcgaagat gcgttgggtg tagtagttcc aatacccgcg
    23101 gcgcctgttg acggaaaagt gttttgtgca tccattttgc tccaggcaag aaaacaaaat
    23161 gtaagtagaa tagacctgga taaagtaaag acatagattt tcggtttcat aaaattattt
    23221 tgtaacacac aatctatgct tgtatacaaa acttcattta agctattcgc ttaatacctg
    23281 cattacgaca acatattgca catacaggat actattaact gtttaacgca gacgaatggc
    23341 atccgtcgtt caaaaggttc tttatgttga aaggaacaat ttcgtaagtg aagcttattt
    23401 atcttaggca aggatattac tgtgactgca tacgaattta tattctcaaa aaaaagtact
    23461 catcgcattg caagacattc ggtgttttgg cttgcgtact gcatttattt ttatttacag
    23521 agtattccgc cacgtacgtt tgacgaattt tttgtaagaa gaacgtattt tatcgccctg
    23581 attaacttat ccgcctttgc tcctgtgttt attgctgtta cttatttttt tatttattac
    23641 ttattaccaa atacgatcgc gaaaaaaaag tatttgcgtt ttattgcagg ttttttgctt
    23701 tcatacattg tgggaacagc tataaattat tttaccgcag aatggtttct gatagttaca
    23761 gcattttttc ctaacacttt tcagcaccgg ctcgagatgg gcaattacaa cacccggtgg
    23821 gggatggtaa tagctacact tgctttgggt ataaagctga gtaagaactg gtatatacaa
    23881 caaaaggaaa atctcgaaat aataaaacga aaatcaagga ccgaaatgca atctgaaaaa
    23941 gcaaagattc atcccgagtt actgctgcgt tctttggata atatttacga ccacattcag
    24001 tcaggttccg ataaagcacc ttccctgata ttaaaccttt cagaagtttt gagctattct
    24061 ctgtatgaga atgaaaacat aagggttctt cttaaaaatg aattgataca attacagcat
    24121 ttgatagcgc ttgagcagca gaaaaaagaa ggctgtcttt atattgaaat gcgagagaaa
    24181 ggaagtagca tgaatacata tgtggcgcca atggtgctgg taaaaatgct ggaacaggca
    24241 attactcatt tatacagggc tggacttttt tcctgctttg ttagacttaa tcttgtcgag
    24301 gaaaataata cgcttttttc aacactcagt tttagacatg aagccggaaa ggcgttatgc
    24361 aatatcaact gggaatcatt tatcacaaat acgcgaaaca ggttaactgc gcattatgat
    24421 ccatccgatt ttgctattga gctaacaaaa tatagaagcg aaataatcgt gaagcttcaa
    24481 ttggagcttt cagaacatgg agaagataaa aagttgatac caaataataa ggaaacagct
    24541 tatggcgatt tatgatttta tattcacaca aaagaaacca gggaaatatt tccggcatat
    24601 cgctttttgg gcagcacagc tattgttttg gattttctgg gtgaccgctt tttttggtaa
    24661 ttttattgga acaattgagt ggctttttaa gacctacact ggtttccttt tacatatatg
    24721 ctacacctac ttaattgtat attattttgc acctaaattt cttgacacaa aacaatattt
    24781 aaaatttggt ttttccgtcc ttcttattac gctgcttagt tacgtgcttt ttctgcttaa
    24841 tcttttttgg attaccgact catttaaaga atctcgggat caccaactgt tgatgctttg
    24901 gttttacact atgaatttca taattaacgg gccgcctcct gtttgcgcta tgtttttaac
    24961 ctgtaaaatg cttaagaatt attacattaa aatggaggaa aaacaaacgc tcattaaaga
    25021 aactgcccac gctgaaatgc agttgcttaa agcacaggta catcctcatt ttcttttcaa
    25081 tacgctcaac aatatttatt cttttacgct aaataaatcg cctgaagcag gcaatcttgt
    25141 tctaaaatta aaagacacta caagatatat ggtgtatgaa tgtgatacag cattggtccc
    25201 cttgcagaag gaaattaaaa tgctaaaaga ctatgtggaa cttgaaaagg tgcgctatgg
    25261 caaacgcctt gaaactgaaa taaacgttga tggtaaatat gagaataaaa tgataacgcc
    25321 cttattaatg ataccttttg tggaaaacag ttttaagcat ggtgccagta aaatgctgag
    25381 aaacccctgg ataaaactat ttatacaggc cgatgaagac gtacttcatt ttactctggc
    25441 taacagtaaa cctgcggata aggcactgca cgcccgggga ggtatggggt taaggaatgt
    25501 aaaaaaaagg cttgagcttt tatatccgga ggatcactta ttgacgattg aaacaacagt
    25561 gaacacgttt acggtcaata tgcaacttcc gttacaaaaa attgaaatac aatctgcgct
    25621 tgattaatat ttctgcgaag caatgctgaa ctataaaaaa ataatttgta ttgctgtgga
    25681 tgacgagccg cctgcgttac aggtgataga aagatatatt gatgccattc cttcattgga
    25741 gcttactgcc tcatgtggca acgctgtaga agcactcacg gtgcttcaaa ataaccatgt
    25801 tgacctgatg ttcctcgaca tacaaatgcc gcacatattt ggtactgatt ttatgcggac
    25861 gatcagtaac ccgccgaaag tgattttcac aaccgcattc agaaaatatg ccgttgaagg
    25921 atttgatctg gacgcagttg attatttgct gaaaccaatt tcgtttgaac ggtttctgaa
    25981 ggcgatcaat aaagtgatga aattgaatct gccggtgagc gaaaacgttt tacctcctga
    26041 ggcaccgttg aaagacaatg gaaatgattt tatctttttg cgggccgacc gaaaaaatat
    26101 taaactgaac ctttccgata tcctgtttgt agaaagcctg aaagattaca tcaaagttgt
    26161 agcaaaagac aaaacgattg ttgccaaaca ttctatttca gcactggaag aaaaccttcc
    26221 gccgcatttg tttgtccgca ttcaccgttc ctttatcgtc tcgctgaaca atatcgattc
    26281 gttcacacag gatttggtgc agatcggcaa atatgaatta cccatcagca gaagctaccg
    26341 ccatgaagtg gaaaaagcgc tgaagaaata aacgttcata tttatcactc ctctctccaa
    26401 tgcacgatca ggtaccgctc gttatccaac ggcaggtaac catgatcata acaataataa
    26461 tacgtgctgc cgcttttatt ggtgaatttg tgcgtgatgt acttgaagga aaaaccatgg
    26521 tgcagtaatt tttccctggt cgtttttgtc attttttcac ccgcaggcaa caagtcttct
    26581 aatattctcc tgtttttgcc aagtgcgtga ttgacgttgc gcacatagtt cgtggaatcc
    26641 gcttttagct ggttgttgta attattccgg cagtaatcgt cgcagaattt tttatcggcg
    26701 cggccgcgta gcgctttgcc gcattgaagg caggttttgg gttgttccat aaaaaaggtt
    26761 tcggttccta aagataaaaa aattctgctt acaaccgttt acaaacggat acatacggaa
    26821 gtaaacgaat aaaaaccggc tgccggcttt tcccaacttc atctttgtga cgtcattggc
    26881 aaggcgccgc cggtgattga gataaacaaa attttaaaac gtaaaaatgt ttgtatgtac
    26941 gcacttaaaa acaaggttca attgattggg aaccttggta acaaccctga gatccgcaca
    27001 accgaagccg gaaaaaaaat ggcccgtttt agcgtcgcta ccgacgaaac ataccgcaac
    27061 tcaaaaggcg aaaaagtaac agaaacgcaa tggcacaatc tgattgcctg gggtaaagtg
    27121 gccgagatcg tggaaaagta tttatcaaaa ggaagcgaga ttgccgtcga aggcaagctt
    27181 atgaaccgca actatgtaga caaagaaggc gtgaagcgct acattaccga ggtccacgtg
    27241 aacgaaatgc tcatgcttgg cggtgataag aaacaagcga aagcaaaggc ttgattcttt
    27301 cggcatatat cctgacaaat tgctgcagct gctccgttgc tgcggcaatt ttatttcccg
    27361 gccaaaattg tttttttctc gaactaaaat aattagtaat ttgcgtgcta aatcaattag
    27421 ctatgagcta tgctggaaaa aatttcaaac atcttcgaaa attaagagga tggacccagg
    27481 aggaatttgc ccgaaaatta aaaataaaac gctccctggt cggcgcttat gaagaagagc
    27541 gcgctgaacc aagactcgac attctcaaag aactttgttc gatattcaaa ttgagccttg
    27601 aagaattatt gctgaaggac cttggctcat taagaaacgg agggtcatac attgacaaac
    27661 gaaggcaaca gaaactggaa ggaaaactga acgagatcca gtttgtaccg gtgaaggcgg
    27721 cggcgggtta tctcgccggc tatgcagacc ccgaattcat cgatgaatta aatacgttta
    27781 ccctgcctat gcttgcgccc ggcgaatacc gcgcatttga aattgtaggc gacagtatgt
    27841 tgccaacgcc aagcggtagc atcatcgtcg gcgaaaaagt tgagaatatt gacgacgttc
    27901 gggcaaacaa tacctatata gtcgtttcaa aaaacgaggg tattgtctac aaacggatca
    27961 tgaaaaacaa ccggtataag aacaagctca cgctcatgag cgataatccg caatatgaac
    28021 cgtaccacgt taatcctgaa gatatcctgg aaatttggag ggcccagatg gtcattacaa
    28081 aagcgaatac gcagcagcga tgggatgtga accaacttgc tggattggtc agcaacctgc
    28141 aggaacaggt tagcagtctg aagaaaaaaa tgaattaaga gttctcaccg tgtaatcaat
    28201 tacacacgcc attgcccatt cgtcaattat caatgctcta ataattattc ctgcagttat
    28261 ttttgacgaa accaaccgtt catgccgcga caatttgttc ttgttgtttt tttattttcg
    28321 ttgtttgtcg tttcagcccg gggtcaaagc aaaacggtcc atgctctcaa agtaaagtca
    28381 gctccgaaac tcgacgggaa attagatgat cctgtttggc aaggtgccga agcggcgaca
    28441 gaatttatta tcaaaaaccc ggactttgga aaaccttccg cacaaagaac ggaagtgaag
    28501 ctaatataca cagatgaggc tttgtacatc ggcgctcatt tgtacgatga tccaaagctt
    28561 gttcgcacaa cccttacttc aagagatgac taccagttcc aggatgcaga ttattttgga
    28621 atcgcatttg atacatacca cgacaaacaa aacgcgtttg agttcatcgt cacatctgcg
    28681 aatgtgcaaa gcgatattcg tatttcatct ttggtcgctt catcgaacgg aagcaacagt
    28741 tttggccaac caggtttcga caagaactgg gatgctgtat gggatagccg cacttcaatt
    28801 gccaatgatg gttggatcgc agagatcaaa atcccgtatt cggcaattcg attttcaaaa
    28861 gaagagatac agcattgggg tttgaattat gtgcgcgtca tccgccgtct aaatgaggaa
    28921 agctattggg atccggaaga tccgaagata gacggttatg tgaaccagtt cggcaccctc
    28981 gaaggtctgc agggaattga acctccattg cggttgtctt tcctgccata catttcaact
    29041 ggctacagcg aggtacctac aaatgcgggt acgatcgaaa catttttgca cagcggtgga
    29101 atggatgtga aatacggcat caacgaaagc ttgacgctgg acatgacact cattcccgac
    29161 ttcgggcagg tgcaaagcga caatgttgtt ctaaacctga cgccgtacga acaacagttc
    29221 caggagaatc gcccattctt tacagaaggc actgaactgt ttaacaaggc gggcgttttt
    29281 tactcgcggc gtgtcgggag cacgccaacg aagtattacg acgtattgga tctggcggag
    29341 gatagtggct attcaattat caggaaccct tatctcaccc aattgtacaa cgcgacaaaa
    29401 ttttcaggcc gtacaaaaaa taaccttggt attgggatct ttaatgcggt tacagcgccg
    29461 atgcatgccg aattggaaaa acaggacggg actaaatttg agatcgaaac cgagccgctg
    29521 gccaattata acattattgt tctcgaccag cctttcaaca atcgctcatc attgacgttc
    29581 acgaatacaa atgtcgcgcg cagcggtgat gcaagagatg cgaatgtttc tgcgttagac
    29641 cttgcgttgt tcgacaaaaa aaatgtgtat cgtttccagt cgagaaataa tttcagtttt
    29701 gtaaaagatg ccgatccaca taacgggttt caaacgatca attctctcga caaagtaagc
    29761 ggcaaatggc aatggggcgt taagaacacg atcatatcgg cggattatga tccgaatgat
    29821 ctcggttatc tcagggcgcc taatcttttt tcaaacagcg gttacctttc attctaccag
    29881 tttacgccca atgaacattt taatttccgc aaatactcca taagcgttga acattcatct
    29941 tattttgatc cgatgcatta tagcatgttt gagatacgcg gtagctttct tcatgtgttt
    30001 agaaactttt gggatatctc gcttaatgct ttttcggatc cgtttccaac ggatgatttt
    30061 tatgagctgc gcacgccggg caggtatgta aaaaaaccgc agttcacatt cgctggcctg
    30121 tttggaagca cagacagcag gaaaaagtta tgggtgaatt atggagttgg ttatgcgggg
    30181 ctttcgccgg ttccaaatga cccgtttttt cttacaaatc ttggagcccg gtacaggttc
    30241 aattcgaaat tcagcctgga attcagtggc agccgaacag aagatcgcgg gaatttaggc
    30301 tgggccgaca acgatgcaag taccggcgag ccattcgtcg gtttacgccg gatattggaa
    30361 gtgacgacca cgatggacgg cgtgtataat tttaaggcaa gaatgaattt gagcatgcgc
    30421 atacgtcatt attggagtaa cgtaacatac cgctcctttt acgacgttgc tgctgatggc
    30481 agctggatcg ataaaccttt ccaggaaggc tatgatgaaa acttcaatct gtttaatctt
    30541 gacatgtttt tcacctggga cttccgcctc ggaagccgac tcctggtggc gtggaaaaat
    30601 gcgctgggcc ccgatgcagg tgtagatggc gacaggtatc aaaattatcc gaagaatttc
    30661 aggcaatctt ttcacttgcc gcacagcaac gagctgagcg taaaatttat ttactatatt
    30721 gattacctgc agttgaaaag gaagagttga acgtgcgtgt tgaattacgt ctgcccgagc
    30781 tatttgtgag tggatgaacc atgatctgca tttaattggc gatcattcgc aaattccact
    30841 gaaaccgttc gttcgatagc ttttccgacc gcaacgctaa gcatcgtttc tttcctggag
    30901 tcggtatgca cccagctaat ggtgccttgc cgttttaatg ctaaaacact aatatccggt
    30961 aagggtggac ttccctccgg attggttcta aaatgaaagt ttgtgacgag ataatgcgga
    31021 attgaatgtt gcggttgcac cgtagcggta aggcggatca gaatgttctc tgatagcgca
    31081 taatcgaaat cgatcttgaa ggtagtattg gtgttcataa ataacaacat ttgaatgttt
    31141 ctaaatgatg ttaccgggaa ttgaatcttg ttatgatcaa caatttatat ttctctcatc
    31201 aagccagttg ccaaagtaaa cgaaatgtat gaaaagtgaa aaattttcag tgcgtcgtcg
    31261 ctacaaatac tttacgtaat tcaagctgac gaaatttcgc gatcgaaccg gaccgttatt
    31321 ttagattctt ctggttccgg caaatcggta aagccaatga agtagtattg ttagcctata
    31381 tttgaataaa cgcacaatta tggcctttga tcaatatcat gagccgccag gcgatctgcc
    31441 cgaaaaaaca aaaacttttg cgcgcatgat aacttcaatg ggtgaagaag cggaagctat
    31501 cggttggtat gagcaacgta ttgctgtaga aaaagaccga accgcgagag cgatcatgaa
    31561 gaatgcgcaa aaagaagagt tcaagcattt tggaatggac ctggaatttc tgcttcgtat
    31621 gaaacctcag tggcgggaga tcctacaggg aattttgttc aaagacggag acattgttga
    31681 gcacggtgat gaggcagaag aaaatgcaga ctagaatgat gcgtttggtc cccggcatcg
    31741 atatctcgct acgcttccac aagtttcttt tcttctttga aagattctct tgccttaagt
    31801 ccgagcagct ggaacatcgc gttatcctct tcaaacgatg ggttcggcgt cgtaagcagt
    31861 ttgtcgccgg cgaaaattga gttcgccccc gccatgaaac acagcgcttg ttcagcgatg
    31921 ctcatgctgt ttctgcccgc gctcaatcgc accatacttg ccggcatcag aattcgtgcg
    31981 gttgcgatca tccgaaccat atcccaatta tccaccctgg gattatccgc cagcggagta
    32041 cccgcgatgg caacgagcgc attgatggga acactttcgg gatgttctgg catcgttgac
    32101 aaagtgtgca gcattttgat acgatcgtcg tgcgtttcgc caagcccgat aatgccaccg
    32161 cagcacacag tgacgccggc tttacgcaca tgttccagcg tctgcaaacg atcgtcgtat
    32221 gttcttgtgg taatgatttc accgtaatag tctgctgatg ta
//
LOCUS       DASQJI010000745         2155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1335062,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000745 DASQJI010000000
VERSION     DASQJI010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335062"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VEV83_19955"
     CDS             complement(<1..1097)
                     /locus_tag="VEV83_19955"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK47466.1"
                     /translation="MNLKLILFIIVALPFALDAQEKFAGTWTGSLITLDTLRMVLHVS
                     QSADGTYKASIDCPTQNMFALNCDKVEASNNGKDTLLSFSIDKLKVSYTGKMVNDTTL
                     AGNFTQGATIPLVFYKTFSPQVAKAIRRPQTPKPPFPYRSEEVVYKSPDQLMQFGGTI
                     TIPQGRGPFPAILLITGSGQQDRDETIFDHKPFAVIADALTKDGFVVLRVDDRGIGNT
                     NGNIVTATTADFVNDANVSIDYLKTRPEVNDNKVGLLGHSEGGLIATMIASQRKDVAF
                     IVLLAAPGVPMIDLMAEQNVAILIASGISPATAAQYKILYTEVANATLNAPDQNVAKQ
                     EVLTRVNNWIGRNDSSTVQAVGFRSEEAKQQ"
     gene            complement(1094..1762)
                     /locus_tag="VEV83_19960"
     CDS             complement(1094..1762)
                     /locus_tag="VEV83_19960"
                     /inference="COORDINATES: protein motif:HMM:NF025015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HYK47467.1"
                     /translation="MKIVLRRLIWLIMLLPAVYLAIVWTGIPQTVPMHFDLKGNVDQY
                     GTKTDLLIMTAVLTGLNMLLYLVILNIYKIDPKKYAAQNKERLQRIGFSVSLYLAAVL
                     AMLIYVISTNHINIVMKFVFVAMGLLFALIGNNMYNLKPNYFAGMRLPWTLENEDNWR
                     ATHHVAGRLWFFGGFVIALLAFVLNEQWSVYSTFIALSFLIFIPVIYSYRYYKRSQQK
                     KSGS"
     gene            complement(1764..2030)
                     /locus_tag="VEV83_19965"
     CDS             complement(1764..2030)
                     /locus_tag="VEV83_19965"
                     /inference="COORDINATES: protein motif:HMM:NF033789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autorepressor SdpR family transcription factor"
                     /protein_id="HYK47468.1"
                     /translation="MNIVFKALNDSTRRAILELLQKNDMTAGDIADKFDISFPSISHH
                     LDLLKQAQLVTTKKEGQYVYYSLNTTVMDEIVKWLMQFKTKKNK"
BASE COUNT          576 a          472 c          463 g          644 t
ORIGIN      
        1 tactgttgct ttgcctcttc agatctaaaa cctacagcct gcactgtaga agaatcgttt
       61 cttccgatcc aattgttgac tctcgttagt acttcctgtt tagcgacgtt ctgatccggc
      121 gcattaagcg tcgcgtttgc aacctctgta tatagtatct tatattgcgc cgcggtagcc
      181 ggactgattc ccgaggcgat taggatagct acgttttgtt ctgccatcaa atcgatcatc
      241 gggacgcctg gtgcagcgag caacacaatg aaagctacgt cttttctttg cgaagcgatc
      301 atggttgcaa ttaatcctcc ttcgctgtgg ccaagcaacc cgaccttgtt atcgttcact
      361 tcaggccgcg tttttaaata gtcgatagaa acattcgcat cgttcacgaa gtctgcggtc
      421 gttgcagtca cgatgttgcc attggtattt ccgataccgc gatcgtcaac gcgcagtacg
      481 acgaaaccgt cttttgtcag cgcgtcagcg atcacggcaa aaggtttgtg atcaaagatg
      541 gtttcatcgc ggtcctgttg cccggagccg gttattaaca gaatggccgg gaatggccct
      601 cttccctgcg gaatcgtgat agtgccacca aactgcatta attggtcggg gcttttataa
      661 actacttctt cgcttcgata cgggaaagga ggtttcggcg tttgcggtcg ccttatggct
      721 ttcgcaactt gcggagaaaa tgttttataa aacacgagtg gtatcgttgc accttgcgta
      781 aaatttcctg cgagcgttgt atcattcacc atcttgccgg tataactcac tttcagttta
      841 tcgatggaaa aacttagtaa cgtgtctttg ccattattac tcgcttccac tttgtcgcaa
      901 ttaagtgcga acatattttg agtggggcaa tcaatagatg ccttgtacgt tccatccgcc
      961 gactgtgata catgaagcac catgcgcaat gtatccagcg ttatcaaaga gccggtccat
     1021 gtacctgcaa atttttcctg tgcatccagg gcaaacggaa gtgcaacgat tataaacagg
     1081 atgagtttta gattcatgat cctgattttt tttgctgtga tcttttgtaa tacctgtatg
     1141 aatagataac gggaatgaag atcaaaaaag ataatgcaat gaatgttgag taaactgacc
     1201 actgttcatt cagcacaaaa gccaacaggg cgataacaaa tccgccaaaa aaccaaagcc
     1261 ttcctgcaac gtgatgtgtg gccctccaat tgtcttcatt ctccagtgtc catggcagac
     1321 gcatgcccgc aaaataattt ggcttcaggt tgtacatatt atttccgatc aaggcgaata
     1381 acaatcccat ggcaacgaaa acaaatttca tgacgatatt tatatgatta gttgatatca
     1441 cataaataag catcgctaat acggccgcaa ggtacaatga taccgaaaaa ccgatcctct
     1501 gcagcctttc cttgttttgg gccgcatatt tttttggatc gattttataa atattcagga
     1561 tcaccaggta tagcagcata tttaagccgg ttaacacggc ggtcatgatg agtaagtcag
     1621 ttttcgtgcc atattgatca acgtttcctt tcagatcaaa atgcatgggc actgtttgcg
     1681 gtatcccggt ccaaacgatt gcgagataga cggcgggcaa taacatgatg agccaaatga
     1741 gccgtcgtaa aacaattttc atattattta ttttttttcg ttttaaactg catcagccac
     1801 ttcacaattt catccatcac cgttgtatta agtgaatagt atacgtattg tccctccttt
     1861 ttagtcgtta ccagttgcgc ctgttttaat aagtcgaggt ggtgagaaat gcttgggaag
     1921 gaaatatcaa acttgtctgc gatgtcgccg gcggtcatat cgttcttttg cagcaattcc
     1981 aggatggccc ggcgggtgga atcgttcaat gccttaaaca caatattcat ttcgatgatt
     2041 gtatatttag acaaatatct aattaattcg aattaaaaaa acttttttgc ggaaattttt
     2101 ttcacggcgc acaaaatgcg gataagtggc aataatttcc aggtgagaag aataa
//
LOCUS       DASQJI010000746         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2413210,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000746 DASQJI010000000
VERSION     DASQJI010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2413210"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VEV83_19970"
     CDS             complement(<1..716)
                     /locus_tag="VEV83_19970"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HYK47469.1"
                     /translation="MAKSFSIRTLLMYAALLLAAFSFIYPFIWMIGASFAPMNEIGGM
                     SFWPSHPTWGNFISMLDKIPIGRSLVNSLLVALTTTAVVIITGSMVGYALAKLRFAGR
                     QLIFYVIVFTMSLPFQITLIPNYITIVRLHLVDTLPALIIPFSVSAFAILMFRQAFQG
                     LPQALIDAARLDGCNEFGIIFRVLWPNIKPTLVTVAILTFIGSWNEVLWPLIAIRNEQ
                     LMTMPQLVTLFAVGGRSDAQL"
     gene            complement(763..1671)
                     /locus_tag="VEV83_19975"
     CDS             complement(763..1671)
                     /locus_tag="VEV83_19975"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HYK47470.1"
                     /translation="MDPAITIQTKQLKKSLLNRKKLTPYVMVSPYLLFLLVFVLFPVL
                     FCLFLTFNRWNIISPMHFIGTDNYNRLIHDRLFWTAIWNTLKFLLVHIPLQLAVSLFL
                     AELLNQKIKAIAFFRASFFMPVIVSGVVITILWQQLLGFDAGIINRFLTSIGMQKIGW
                     LVNPDIAIYSIAMMATWKNVGLYVILFLVGLQTVPPQYYEAAKLEGATRWQRFYHITL
                     PMINPTVFMVVILSTIGGFSLFIEPYIMTGGGPMNQTLSAVLYIYKQAFQYYNMGYSA
                     TLGFFYALIIMTVVILQKKFIEKEDQ"
     gene            complement(1676..>1899)
                     /locus_tag="VEV83_19980"
     CDS             complement(1676..>1899)
                     /locus_tag="VEV83_19980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47471.1"
                     /translation="RGRFSDILFDEHVTIEYGNGSEKQERYQQMLTAMISDQWMWIKD
                     KDHERIIDQTNAMQSLKTAEEATLLAQQF"
BASE COUNT          575 a          417 c          395 g          512 t
ORIGIN      
        1 agctgagcat ctgatcttcc gccaacggca aaaagtgtta ccagttgcgg catggtcatg
       61 agttgctcat tgcgaattgc gatcaatggc cataacactt cgttccacga cccaataaat
      121 gtgaggatcg caaccgttac cagcgttggc tttatgtttg gccagagcac cctgaaaata
      181 attccgaact cattgcatcc gtcaagccgc gcagcatcga tcaatgcctg cggcaaaccc
      241 tggaaggcct gcctgaacat taatatggca aacgcactta cagaaaacgg tataatgaga
      301 gcaggcaaag tatccacgag gtgcagccga acaatagtaa tgtaatttgg tatcagcgta
      361 atttgaaaag gcagggacat cgtgaaaaca atgacgtaaa aaataagttg cctcccggcg
      421 aatctcaact tcgcaagcgc atatccaacc atcgagccgg ttattattac caccgctgtt
      481 gtagttaatg caaccaatag gctgttgacc agtgaacgcc cgattggaat tttatcgagc
      541 attgatataa aatttcccca cgtaggatgc gatggccaaa agctcattcc gccaatctcg
      601 ttcatcggcg cgaaggatgc gccaatcatc cagataaacg gataaatgaa cgagaatgca
      661 gcaagcaaca gggcagcata catcaaaagt gtccgaattg aaaaactttt tgccatcact
      721 ttaccaatgt cattttttgt ttcaaaacct ttatttcaaa ttttattgat cttctttttc
      781 gataaatttt ttctgcagaa taacgaccgt cattattatc aatgcataaa aaaatccgag
      841 cgtcgctgaa tatcccatgt tgtagtattg aaatgcctgt ttatagatgt acagcaccgc
      901 tgacagtgtt tgattcattg gaccgccgcc ggtcataatg tatggctcaa tgaataaaga
      961 aaatccgccg atcgttgata agatcaccac catgaaaacg gtaggattta tcatcggcaa
     1021 cgtaatatga taaaatcgtt gccagcgtgt cgctccttcg agtttggccg cttcatagta
     1081 ttgcggcggc acggtttgaa gcccgacgag aaaaaggata acgtacagcc ctacattttt
     1141 ccaggtagcc atcattgcga tcgaatagat agctatatca ggatttacca gccaccctat
     1201 cttttgcata ccaattgatg tgaggaatcg attaataatg ccggcatcaa acccaagtaa
     1261 ttgttgccaa agtatggtga taacaacacc tgatacaatt accggcataa aaaatgacgc
     1321 cctgaaaaaa gcaatggctt ttattttttg atttagcagt tcggctaaaa acaaagagac
     1381 ggcaagctga agaggaatgt gcactagtaa gaacttcagc gtattccaaa tcgcagtcca
     1441 aaacaaccgg tcatggatca gccgattata attatccgtg ccgatgaagt gcatcggcga
     1501 aatgatattc catctattaa aagtgagaaa gagacaaaac aacacgggaa ataatacgaa
     1561 tacaagcaga aacagaagat atggcgacac cattacatac ggcgttagct tcttacggtt
     1621 cagcaaagat ttcttcagtt gttttgtttg tatcgtgatc gctggatcca ttcaattaaa
     1681 attgttgtgc cagtagtgtc gcctcttccg ctgtttttag tgactgcatg gcgtttgttt
     1741 gatcaataat acgctcatga tctttgtctt tgatccacat ccattggtcg gagatcattg
     1801 cggtaagcat ttgttgataa cgctcctgct tttccgaacc gtttccgtat tcaatcgtca
     1861 cgtgctcgtc gaatagtata tctgagaatc gtcctctta
//
LOCUS       DASQJI010000747         1767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2873426,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000747 DASQJI010000000
VERSION     DASQJI010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2873426"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..1430
                     /locus_tag="VEV83_19985"
     CDS             42..1430
                     /locus_tag="VEV83_19985"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HYK47472.1"
                     /translation="MISIVEKLIKTFGSEAVLTAEEAAMRVASNWRQQENLHCLALLR
                     PTNTEQVSQMLKICNEFDQPVVPHGGLTNVVGGVVTKEDEIALSLEQMNKVEDISVQN
                     KTVTVQAGVVLQQLQQIVSENGMLFPLDLGAKGSCMIGGNIASNAGGLHALRYGVARN
                     LVLGLEVVLADGTVISSMNKMMKNNAGYDLKQIFIGSEGTLGIITRAVLKIEDLPKTK
                     NTAFIGLESFEKAIQLLQESKKILKNDLTSFELLWQDYYVLMTSPPSTYAPPLPHRYP
                     FYVLMETLGQEEKNDKILFEQFLEDTLKSGLIADAAIAQSQQELSWFWSIRENVELIF
                     SVHRPVFLFDVSLAIPDMDHYLATIKSGLRRVWQDVHFYAFGHMGDGNLHLYVCCGND
                     DISTRHAVEEIVYQPLQAIGGSITGEHGIGLEKKEWLHLSRTAEEIQLMKTLKRALDP
                     KGILNPGKLFTV"
     gene            1597..>1767
                     /locus_tag="VEV83_19990"
     CDS             1597..>1767
                     /locus_tag="VEV83_19990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012792431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK47473.1"
                     /translation="MNLRRDVFQAIADPTRRAILVLVATQSMTAGAIAANFDTARPTV
                     SKHLQILTECELL"
BASE COUNT          543 a          377 c          415 g          432 t
ORIGIN      
        1 cttagaataa attttacagc agtaaagaaa gaaaaacaag aatgatatca atcgttgaga
       61 aactcatcaa aacttttgga agcgaggctg tgctaaccgc agaggaagcg gcaatgcgtg
      121 tagcaagcaa ctggcggcaa caggaaaatc tgcattgtct tgcgctgctg cggccaacaa
      181 atacggagca agtttcacag atgcttaaga tctgcaatga attcgatcag cctgtcgttc
      241 cccacggcgg cttaacaaac gttgtgggcg gcgtggttac aaaggaagat gaaattgcgt
      301 taagcctcga acaaatgaac aaggttgaag acatcagcgt gcaaaacaaa accgtgactg
      361 tacaggccgg tgtggtctta caacagctac aacagatcgt ttcagaaaat ggtatgttgt
      421 ttccgctcga ccttggcgca aaaggaagct gcatgatagg cggcaacatc gcgtctaatg
      481 caggaggtct gcacgcactc cgttacggtg ttgcccgaaa tctcgtatta ggattagagg
      541 tggttttagc agatggtaca gttatttcat caatgaacaa aatgatgaaa aataatgctg
      601 ggtacgatct gaaacagatc tttatcggct ccgagggcac attagggatc ataacaagag
      661 ccgttttgaa gatcgaagac cttccaaaaa caaaaaacac cgcctttatc ggcctggaga
      721 gtttcgaaaa agcaattcaa ctgctgcagg aatcgaaaaa gatcttaaag aatgatctca
      781 ccagttttga actgttgtgg caggattatt acgtgttaat gacgtcgcca ccgtcaacat
      841 acgcgccacc gttgccacac cgctatcctt tttatgtttt gatggaaacg ctcgggcagg
      901 aggaaaagaa cgacaagatc ctctttgaac aatttttgga agataccctc aaaagcggat
      961 tgatcgctga tgcagcgatt gcacagtctc aacaagagtt atcatggttt tggagcattc
     1021 gtgaaaacgt ggaattgatc ttctccgttc atcgccccgt atttttattt gatgtgagtc
     1081 tcgcaattcc tgatatggat cactacctcg caacgatcaa atccgggctt cggcgtgttt
     1141 ggcaagacgt acatttttat gcgttcgggc atatggggga cggcaatttg cacctgtatg
     1201 tttgttgcgg caatgacgac ataagcacga ggcatgctgt tgaagagatc gtttatcaac
     1261 cgctccaggc aatcggcggt tccataacag gcgagcacgg aattgggttg gaaaaaaaag
     1321 aatggcttca tctgagtcgt accgccgaag agatccaatt gatgaaaact ttgaaaagag
     1381 ctctggatcc aaaaggcatt ttgaacccag gaaaattgtt taccgtttag ctaactactt
     1441 catcaactct gtaaggaaaa tacgccgcct cttcaaaaaa ctaaacaacg aatttcagcg
     1501 cgacctggaa gcacgactta aaaaatttca aaaaaattcc agaaaaaact tgcgtagtta
     1561 aataactaca tatatttgta gtcaaatagc tacacaatga atttaaggcg cgacgtgttc
     1621 caggcgatag cggacccgac aagaagggct attcttgtat tggttgcgac tcaatcaatg
     1681 accgcgggcg caattgcggc aaactttgat accgcgcggc caaccgtttc aaaacacctg
     1741 cagatcctca ccgagtgtga attgctt
//
LOCUS       DASQJI010000748         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1799314,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000748 DASQJI010000000
VERSION     DASQJI010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799314"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(269..811)
                     /locus_tag="VEV83_19995"
     CDS             complement(269..811)
                     /locus_tag="VEV83_19995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYK47474.1"
                     /translation="MNVLVIIIVVIAVIVVGVLVAAASTSTEYKIERQVIINRPKLDV
                     FNYVKLLKNQDHYSKWVMTDPNMRKEFRGTDGTVGFIYAWESDNKQVGKGEQEIISIA
                     EGERIDCEVRFMKPFEGKSIISFLVELLEANETQVTWIFNGRRNFMAKIVHMLFNLKE
                     RLGRDMEISLERLKNNLEKY"
     gene            complement(808..1194)
                     /locus_tag="VEV83_20000"
     CDS             complement(808..1194)
                     /locus_tag="VEV83_20000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HYK47475.1"
                     /translation="MTKSSNNMRVGNIDEYIAGFPSNIQVMLQELRGTIIQAAPEVEE
                     TISYNIPAFKLHGAYLIYFAGWKNHISLYPFSSEMDALLPEAAAYKTSGKGTIQFPTD
                     KPLPLDLVERIIKLRIQESRNKINIE"
     gene            complement(1211..>1769)
                     /locus_tag="VEV83_20005"
     CDS             complement(1211..>1769)
                     /locus_tag="VEV83_20005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HYK47476.1"
                     /translation="VLFLHVSLDGFVGGPNGEMDWIHVDEELFEYAGRETDKADTALY
                     GRVTYEMMEAYWPNAGAQPNATKHDIQHSSWYNGVEKIVVSRTMKNTPAKNVNIVSDN
                     VPGAINQFKQREGNNIVIFGSPSIGRLLTEHKLIDEYWLFINPVILGKGIRLFPEMQE
                     RLKLTLLAHNVFYSGVVALQYGNEL"
BASE COUNT          454 a          433 c          316 g          566 t
ORIGIN      
        1 ttctacataa aattttgctg cctcgtgtgc ctggttatca aaccataaca tgggtgttat
       61 cttttgcata aaaaagtttt actttttgaa attagttgat gaaaagttca tcattaaaag
      121 taaatgactg tgcttgtcct gccgacatca ggaggcatct gcaacgcccc atcgctctgc
      181 caattctttt actttctaaa tgctttggcg atgttgctat gaaatagttt ttctactttt
      241 ccgccatctc caatccgcag caattacatt aatatttttc aagattattt tttagccttt
      301 ccaaacttat ttccatatct cttccaagcc tttctttcag gttgaacagc atgtgaacaa
      361 tttttgccat aaaatttcgc ctgccattaa agatccatgt tacctgcgtt tcatttgcct
      421 caagaagttc aaccaggaaa gaaatgattg actttccttc gaacggtttc ataaaacgca
      481 cttcacaatc gatcctttct ccttcggcaa tactgattat ttcctgttcg cctttaccca
      541 cttgcttatt gtcactttcc catgcataaa taaatccaac agtcccgtca gtgccgcgaa
      601 actctttcct catgttcggg tccgtcatca cccatttgct gtaatgatcc tggttcttca
      661 gcagtttcac ataattgaaa acatccagct tcggcctgtt gatgatcact tgtcgttcga
      721 tcttatactc ggttgaagtg gaggctgctg caaccagcac cccaacaacg atcaccgcga
      781 tgacgacaat gatgatgact aaaacattca ttctatgttg attttatttc ggctctcctg
      841 tattctcaat tttatgatcc tttcaacgag gtccaatggc aacggtttat cggtcggaaa
      901 ctgaatcgtt cccttaccgg atgttttata tgctgctgct tccggtagca atgcgtccat
      961 ttcagatgag aacgggtaaa gagagatatg atttttccat ccggcaaaat aaatcaggta
     1021 agcgccatgt aatttaaatg cggggatatt gtaactaatt gtttcttcca cctccggcgc
     1081 cgcctgtata attgtacctc ttagctcctg cagcatgacc tgtatgtttg atggaaaacc
     1141 agcgatgtat tcatctatat tgccgacacg catattgtta gaagattttg tcatgctgca
     1201 aaagttattg ttataactcg tttccatatt gaagcgccac aacaccggaa taaaaaacgt
     1261 tatgcgcaag cagcgtaagt tttaatctct cctgcatttc cggaaataac cgaatgcctt
     1321 taccaagaat taccgggttg atgaacagcc aatattcatc gatcagcttg tgctctgtaa
     1381 gcagccgccc gatcgatggg ctgccaaaga tcacaatgtt attcccctca cgctgtttga
     1441 actgattgat cgcgccgggt acgttatcgc tcacaatatt tacatttttc gccggcgtat
     1501 ttttcatcgt tctcgataca acgatcttct ccactccgtt gtaccagctc gagtgctgga
     1561 tgtcgtgttt tgtagcatta ggctgcgctc ctgcgttggg ccagtacgct tccatcattt
     1621 catacgtaac tctgccatac aatgcagtat ctgctttatc ggtttcgcgt cctgcgtatt
     1681 caaacagctc ctcatcaaca tgaatccaat ccatttcacc attcgggccg cctacaaacc
     1741 cgtctaacga aacatgcaaa aacaaaacg
//
LOCUS       DASQJI010000749         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_723673,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000749 DASQJI010000000
VERSION     DASQJI010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723673"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            275..586
                     /locus_tag="VEV83_20010"
     CDS             275..586
                     /locus_tag="VEV83_20010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47477.1"
                     /translation="MNRVEKILEYLGQTPNDNFLRHALALEYIKSGNDEKAQPLFEDI
                     LSDSPDYIGSYYHLGKLLERKGETENAILWYEKGMQAAKLANDQHAYNELQAAYEDLV
                     Y"
     gene            618..1328
                     /gene="pxpB"
                     /locus_tag="VEV83_20015"
     CDS             618..1328
                     /gene="pxpB"
                     /locus_tag="VEV83_20015"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HYK47478.1"
                     /translation="MTRPRIFPLGDHAITVAFGNEIDEEINQSVFSVFRYLKKQKFDF
                     ILDVIPAYASLSVVYDVMRIRNIGVTNSYDYMHDLLQNALQQAPHVMSELRNISVPVC
                     YHESLGPDLTTLSQQRKVAIEEIIQIHSSSVYRVYMLGFLPGFTYMGKVHDKIAMPRK
                     SVPSKSVPAGSVGIAGIQTGIYPVDSPGGWNIIGRTPLKIFEAHNEHPCFFEPGDQVK
                     FEPITLDEFLQHESNYVI"
     gene            1347..>2152
                     /locus_tag="VEV83_20020"
     CDS             1347..>2152
                     /locus_tag="VEV83_20020"
                     /inference="COORDINATES: protein motif:HMM:NF014663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HYK47479.1"
                     /translation="MSVIVIKQGLLDSLQDEGRFGYQHLGINPGGSMDPIAARFANML
                     VGNERTCAVMELHFPAASLLFEERSIIAITGADFSAVVNNEPVETNSSIIVPANSVLK
                     FMRYKNGCRCYLGIYGGWNAELWLNSYSTNMKVFAGGYAGSSLRTKDVIQVNRSSASF
                     RMTEEFASPHQVVKTDLSHLYSQTKKIRCVAGSDYDWLDNHSKNKFESSAFTITSESD
                     RMGFRLHGELLKNANGEDLLSAAVTRGTIQLLPSGQLIILMADHQTTGGYP"
BASE COUNT          624 a          432 c          519 g          577 t
ORIGIN      
        1 gcgcttagca aaaaagatgt ggcgaggaca ggcaaaaaca cttaccagtt atcactcggg
       61 cattttgccg caggaacata tactgtggaa ttaagggcaa gcgatggcag tgcacttcaa
      121 caaacgaaag tgatagtgaa acgcgataat taaccaggac atttaaatgg aaaaccgtct
      181 cgttctgcag gggcggtttt tttatttaaa agctgttgag tttgagtaac ggtcgatgta
      241 aatgcctcgc ttttaatttt gtttatttgc aattgtgaac agggttgaaa aaatactgga
      301 gtatctcggc caaacgccga acgataattt tcttcggcat gcactggcgc tcgaatatat
      361 taaatcaggc aacgacgaaa aagcgcagcc gctgttcgaa gatatcttga gcgattcccc
      421 ggactatatc ggttcatact atcatttggg caaattactg gaacgaaaag gcgaaacgga
      481 aaatgcaatt ctctggtacg aaaagggcat gcaggcggcg aaacttgcaa atgaccaaca
      541 tgcgtataat gaactgcagg cggcgtacga agatcttgtt tattgacggt tgaagatata
      601 tatactgcgt aactgcaatg acacggccac gaatatttcc attgggtgat catgcgataa
      661 cagtcgcgtt tggcaatgaa attgacgaag agataaacca aagtgtgttc tcggtcttcc
      721 gttatttgaa aaaacaaaag ttcgatttca tactggatgt tattccggca tatgcgtcat
      781 tgtcggttgt atatgatgta atgaggatta gaaatatcgg cgtgacgaac tcgtatgatt
      841 atatgcacga ccttctgcaa aacgctttgc aacaagcgcc acatgtcatg tcggaactta
      901 ggaatatctc cgtacctgtt tgttaccacg aatctcttgg gcctgatctt accacgctat
      961 cgcaacaaag gaaggtggcc attgaggaga tcatccaaat tcattcgtct tcagtatatc
     1021 gcgtttatat gcttggcttt cttcccggct ttacatacat gggcaaagtg catgataaga
     1081 ttgcaatgcc ccgaaaatct gtacctagta aaagcgtgcc ggcaggaagc gttggcatcg
     1141 ccgggataca aacgggtatc tatccggtgg attctcccgg cggatggaat attatcgggc
     1201 ggacgccctt gaaaattttt gaggcacaca acgaacaccc ttgctttttt gaacccggcg
     1261 accaggtaaa gttcgagcca attacattgg atgaattttt acaacatgaa tcgaattatg
     1321 tcatttaaca tgaacacaat tagcaagtga gtgtcatcgt cataaaacag ggtcttttag
     1381 atagtttgca ggatgagggc agatttggtt atcaacacct cggaattaac cccggcggat
     1441 cgatggatcc gattgctgcg cgtttcgcaa acatgcttgt gggaaacgag aggacctgtg
     1501 ctgtgatgga gctgcatttt ccggctgctt ctttattatt tgaagaaaga tcaataatcg
     1561 caattaccgg cgcggacttt tcggcagttg taaacaatga gcctgttgaa actaactctt
     1621 caattattgt tcctgcaaat tctgttttga aattcatgcg atacaaaaac gggtgcagat
     1681 gttatctggg tatatatggc ggatggaatg cagaactgtg gctgaacagt tacagcacga
     1741 acatgaaagt ttttgcgggc ggttacgcgg ggagctcgtt gagaacaaag gacgtcattc
     1801 aagtaaaccg atcgtcggca tcattccgaa tgaccgagga attcgcgtcg ccgcatcaag
     1861 tggtcaaaac tgatctttca catctgtatt ctcaaacaaa aaagatccgt tgcgtcgccg
     1921 gtagcgatta tgactggttg gataatcatt ccaaaaataa attcgaatcg tctgcattca
     1981 ccatcacatc tgaaagcgac cgcatgggtt ttagattaca cggtgaactg ttgaaaaatg
     2041 cgaacggaga ggatcttttg tctgcggcgg taacgagagg gacgattcaa ttattgccgt
     2101 cgggacaatt gataattcta atggccgatc atcaaactac gggcggttat cc
//
LOCUS       DASQJI010000750         4423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2261603,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000750 DASQJI010000000
VERSION     DASQJI010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4423
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2261603"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VEV83_20025"
     CDS             complement(<1..409)
                     /locus_tag="VEV83_20025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK47480.1"
                     /translation="MTTLKGPAIFLAQFMGDQPPFNDLRSICEWVKSIGFVGVQIPTW
                     DARCIDLQKAAESKTYADELKGTVSDCGLEITELSTHLQGQLVAVHPAYDTLFDGFAA
                     ESVCGNPKARTEWAIQQLKWAAKASQNLGLDAHA"
     gene            complement(583..1743)
                     /locus_tag="VEV83_20030"
     CDS             complement(583..1743)
                     /locus_tag="VEV83_20030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47481.1"
                     /translation="MGNRKLRMGMIGGGKDAFIGAIHRIAANMDGLIELSCGALSIHP
                     EIAVESGKMLFLPDDRTYTSYEEMMAKESKMPAEKRIDFVTIVTPNFAHFAPAMAALE
                     NGFHVVLEKPMTFTLDEAKQLQRKVQETGLSLCLTHTYSGYPMVKQAKAMVAAGTFGK
                     IRKIYVEYPQGWLSKLSEREGNKQAAWRTDPKRSGKSGAMGDIGTHAAHLAEYISGLK
                     ITQLCADLNIMVEGRALDDDGNVLLRFDNGAAGVLMASQVAAGEENALKIRIYGEHGG
                     FEWAQMEPNTLLVKWLDKPAEVYRAGQPYLSNVAKHNTRTPGGHPEGYLEAFGNIYRN
                     FAQSLMCKLQGSEPTAEMLDYPRVEEGVRGMAFIDNVVASSQSEKKWTEFAV"
     gene            1945..3198
                     /locus_tag="VEV83_20035"
     CDS             1945..3198
                     /locus_tag="VEV83_20035"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK47482.1"
                     /translation="MTAIHRKELFLASRIALIFTAMTFAFRASLEGVWSAEFNLTKEQ
                     LGWIFSPAFYGFTLAMIFGGPLADVLGMKKLLVLAFIGHIAGVIVYLVAKTPTMLFAG
                     TLCIGIGNGMVEAACNPLTVALFPDNKTTMLNRFHVWFPGGIVIGGLISYVMVEQMHL
                     DWRILIAVLFIPAIIYGFLFLKLKFPPTERVTRGVSTRSMFAACLSPLFLIMLACMFL
                     TAATELGTNQWLGALLSGAGVSGILVLVFINGLMAVGRSFAGTFVHRLNPNGMLILSA
                     LLAGIGLLLLSKSSGYAAFGAAFVFAAGICFFWPTMLGFVSEYLPNTGALGLSLMGGA
                     GMFSTSLIIPVMGHWYDNFKSAAVASGLSDVEANASAGSQTFMKVAVMPAILLVVFTM
                     IYIARRKHYQKSAHATAPIDPVGEL"
     gene            3212..4087
                     /locus_tag="VEV83_20040"
     CDS             3212..4087
                     /locus_tag="VEV83_20040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK47483.1"
                     /translation="MKTRRTVIKNLAAGAMALPASKIFATGMKSPKSPITFKGNINHS
                     VCRWTYNFLPLDELCKTVKNIGFNAIDLVAPKDWPTLQQYGIYSSMCYTAGENSLTKG
                     WNHTNYHSQLIKDFTEVIPLIPKNGYKDVITFSGSREGMDDETGLKNCTDGLKQILPL
                     AEKNGVTVHMELLNSKVDHKDYMCDNHKWGVELCKRIGSPNFKLLYDIYHMQIDEGDV
                     IRTIRENVAYFGHYHTGGVPGRHEIDETQELYYPAIMKAIVETGFNGYVAQEFIPAAN
                     DKIASLRNAVQLCDV"
     gene            4206..>4423
                     /locus_tag="VEV83_20045"
     CDS             4206..>4423
                     /locus_tag="VEV83_20045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HYK47484.1"
                     /translation="MADNVYDAIVVGSGISGGWAAKELSEKGLKVIMLERGMDIKHVK
                     DYVNTSKNPWEFPHRGRRTQKMVQDFPVL"
BASE COUNT         1145 a         1054 c          966 g         1258 t
ORIGIN      
        1 tagcatgcgc atccaatccc aaattttgag acgctttggc tgcccacttt agttgttgta
       61 tggcccactc agttcttgct ttcggattac cgcaaactga ttctgcggcg aatccgtcaa
      121 agagtgtgtc gtaagcagga tgaaccgcaa cgagttgccc ttgcaggtgc gtggaaagtt
      181 ccgtgatctc caatccgcag tcgcttactg ttcctttcag ttcgtcggca tacgtcttac
      241 tttctgccgc tttttgcaga tcgatgcaac gcgcatccca cgttggaatt tgaacgccaa
      301 caaatccgat gctttttacc cattcgcaaa ttgatctcag atcattgaac ggcggttgat
      361 cgcccatgaa ttgtgcaaga aaaattgcag gacctttaag tgttgtcata taaaccctcc
      421 cgtcctccct agagggaggt atttacttta taacattttt gaactttgaa taatattccc
      481 agcaagtgaa ttgatttcag ctataactaa ttgcggttct ttcaaaacct gatggtttga
      541 aaatctgata accgcggagc cccgatcaac caaatcttcg ttttatacgg caaactccgt
      601 ccacttcttc tcactctggc tcgatgccac tacattatct ataaacgcca ttccccttac
      661 gccttcttcc acccgcggat aatccagcat ctccgctgtg ggttcgctcc cctgtaattt
      721 acacatcaaa ctctgcgcaa aattcctgta tatatttcca aacgcttcca ggtacccttc
      781 aggatgtccg cccggtgttc tcgtgttatg ttttgcgacg tttgaaagat aaggctgccc
      841 ggcacgataa acttcagcgg gcttgtcaag ccatttcacc agcaatgtgt ttggttccat
      901 ttgtgcccat tcaaatccgc catgctctcc atagatgcgg atcttcaaag cattttcttc
      961 gccggccgct acctgcgacg ccatcaatac accagccgcg ccgttgtcaa atcttaataa
     1021 aacattcccg tcgtcgtcca acgcgcgtcc ttccaccatg atgttgaggt ccgcacaaag
     1081 ctgtgtgatc ttcaagcctg aaatatattc cgcgagatgt gccgcatgtg ttccaatatc
     1141 acccatcgcg ccgcttttgc cacttcgttt tggatctgtt ctccacgcag cctgcttatt
     1201 tccttcccgt tcgctgagct tgctgagcca tccttgcgga tattcaacat agatcttccg
     1261 gatcttgccg aaggttcctg cagcgaccat agccttcgcc tgtttcacca tcgggtaacc
     1321 ggaatatgta tgcgtaagac aaagggacaa acccgtttct tgtactttcc gttgcagttg
     1381 ctttgcttcg tccaaagtaa acgtcattgg tttctcgagc acgacatgaa atccattttc
     1441 aagtgcggcc attgcaggtg caaagtgcgc gaagtttggc gtgacgatgg taacaaaatc
     1501 aatccttttt tctgccggca tcttgctttc tttcgccatc atttcctcgt acgaagtata
     1561 cgttctgtcg tctggaagaa aaagcatttt cccggattca accgcgatct ccggatgaat
     1621 gcttaatgcg ccgcaactta attctatcaa cccatccatg ttcgcagcaa tacggtgtat
     1681 cgcaccgatg aatgcatcct ttccgccgcc gatcatgccc attcttagtt tcctgtttcc
     1741 cattgaaaat aaattttgag tgaaaaaatt tttgaagcaa tcttgatcca agctcacgaa
     1801 ccggtatcgc aaattaaata atgcatgtaa tgctttacag gcatggacaa aataaatttt
     1861 tctttctggt ttgaaaacaa taattcttac atttagcgct gaagttttga gcaaaaaaat
     1921 atccctccaa taaatctaac gtgtatgacc gccattcacc gtaaagaatt atttcttgcc
     1981 agtcggattg ccttaatttt tacagctatg accttcgcat tccgtgcatc cctcgaaggt
     2041 gtatggagcg ctgagttcaa tctcacgaaa gaacaattag gctggatatt cagcccggca
     2101 ttttatggtt tcaccctggc catgatcttt ggtggcccgc tggcggatgt gctcggcatg
     2161 aagaaattat tagtgcttgc ttttatcggt cacatagccg gcgttatcgt ttacctcgtt
     2221 gcgaaaactc cgacgatgct ctttgccggc acgctttgca taggcattgg caacggtatg
     2281 gttgaagccg cctgtaaccc gttgacggtt gcattatttc ctgataacaa gacaaccatg
     2341 ttgaatcggt tccatgtttg gtttcccgga ggcattgtta tcggcggatt aatatcttat
     2401 gttatggtgg aacaaatgca cttagactgg cggatcttaa ttgctgttct tttcatccct
     2461 gcaattattt atggcttcct gttcctgaag ttgaaattcc ctccgactga acgtgtcaca
     2521 aggggcgtaa gtaccaggag catgtttgcc gcctgcctca gcccattatt tctgattatg
     2581 cttgcatgca tgtttttaac cgcagcgact gaactcggaa caaatcagtg gctgggtgct
     2641 ttgctaagcg gcgccggcgt ttctggtatt cttgttctcg ttttcatcaa cggtttaatg
     2701 gcagtaggac gctccttcgc cgggacattt gttcatcgcc tcaatccaaa cggaatgctt
     2761 attctgtccg cattgcttgc aggcatcggc ctcttgttgt tgagcaagtc aagcggatat
     2821 gcagcgtttg gtgctgcgtt cgtttttgca gcgggtattt gttttttctg gccgaccatg
     2881 cttggttttg tatcagaata cttaccaaac acaggcgctt tgggcttatc gctcatgggc
     2941 ggtgccggaa tgttctcaac atcgttgatc attccggtaa tggggcattg gtatgacaat
     3001 ttcaaaagtg cagcggttgc aagcgggctg agtgatgtag aagcaaacgc atctgccggc
     3061 tcgcaaacat tcatgaaagt agctgtgatg ccggccatac tgctggttgt ttttacaatg
     3121 atctatatag ccaggagaaa acactatcaa aaatccgcgc atgcaacagc accgatagac
     3181 cctgtcggcg agctataaaa tataaactgt catgaaaacc cgacgcacag ttataaagaa
     3241 tttggctgca ggcgcaatgg cgctgcctgc atcaaaaatt ttcgcgaccg gtatgaagtc
     3301 tccaaaaagt cccataacat ttaaagggaa tatcaaccac tctgtttgca ggtggaccta
     3361 caattttctg ccactcgatg aactttgcaa gacagtaaaa aatattggct ttaatgcaat
     3421 tgacctggtg gctccgaaag attggcccac acttcagcaa tatggcattt acagttctat
     3481 gtgctatacc gctggcgaga acagtttgac aaaaggctgg aaccatacaa actatcattc
     3541 tcaattaata aaagatttca cagaagtaat tccgcttata ccaaagaacg gatataaaga
     3601 cgttattact ttcagcggca gtcgcgaggg aatggacgac gaaacaggat tgaaaaattg
     3661 tactgacggt ttgaagcaga tcctcccgct cgccgaaaaa aatggtgtca ctgtgcacat
     3721 ggaattgctc aacagcaaag tagaccataa agattatatg tgcgacaacc ataaatgggg
     3781 tgtcgaactt tgtaaaagaa tcgggtcgcc aaattttaaa ctgctgtatg atatttatca
     3841 catgcagatc gatgaaggcg acgtgatcag aacgatacgg gagaacgttg cttactttgg
     3901 ccactatcat accggtggcg tacccggcag gcatgagatc gatgaaacgc aggaattata
     3961 ttacccggcc atcatgaagg cgatagttga aaccgggttt aacggttatg ttgcacagga
     4021 atttattccc gccgccaacg acaaaattgc ttcactgaga aacgcggttc aattatgtga
     4081 tgtgtaagcc cctatcccct aaaggggaat tttgtggcgg tattattcat aagcgaaaag
     4141 aaattgaaaa catttcaaaa acaatctaaa taaactctcc ctttagagag ttggagggca
     4201 taataatggc tgacaatgtt tatgacgcaa ttgtagtagg ctccggcatc agcggtggct
     4261 gggctgcaaa agaactttct gaaaaaggct tgaaggtgat catgctcgaa agaggaatgg
     4321 acattaaaca tgtgaaagac tatgtaaaca ccagcaaaaa tccatgggag ttccctcatc
     4381 gcggccgcag aacgcaaaaa atggttcagg attttccggt gct
//
LOCUS       DASQJI010000751         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_417717,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000751 DASQJI010000000
VERSION     DASQJI010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417717"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VEV83_20050"
     CDS             <1..272
                     /locus_tag="VEV83_20050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="GSCFA domain-containing protein"
                     /protein_id="HYK47485.1"
                     /translation="YDVDLAHPNYAATQFVIERFSESCFDHSTRHLIEEIKKLPIAKK
                     HRPFNPQSGQHKKFLEQHLAKTTTLQSQHPYLNFSEELNYFSVRS"
     gene            complement(414..1358)
                     /gene="plsX"
                     /locus_tag="VEV83_20055"
     CDS             complement(414..1358)
                     /gene="plsX"
                     /locus_tag="VEV83_20055"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HYK47486.1"
                     /translation="MKLALDMMGGDFAPLEAVKGLQRYFESGIKDITVVCIGDEEELS
                     PLLLEHKIPQQNISVVPTSGVIGYHEPPTRALKEKPEASIPKGFQLLASGKIDAFVSA
                     GNTGAMLVGAMFFLKPLDGILRPTIGSVVPKIGGATGLIVDVGLNVDCKPQHLDQFAL
                     LGTLYAKIISGIENPKVGLLNVGEEEGKGNALCQASFPLLKENSKINFIGNVEGRDIF
                     YDGADVTVCDGYTGNVVLKMAESFYDIAKSRNVHADEFIDRFDYENYGGTPILGVAKP
                     VIIGHGISSGAAFYNMLLLAQKMVETDLCGAIRNAFHA"
     gene            complement(1383..1577)
                     /gene="rpmF"
                     /locus_tag="VEV83_20060"
     CDS             complement(1383..1577)
                     /gene="rpmF"
                     /locus_tag="VEV83_20060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HYK47487.1"
                     /translation="MPNPKRRHSQQRSAKRRTHYKAQEVTLSKDSTTGELHVRHRAHV
                     SEGKLYYKGKVVSEKAPLKA"
     gene            complement(1667..>2005)
                     /locus_tag="VEV83_20065"
     CDS             complement(1667..>2005)
                     /locus_tag="VEV83_20065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HYK47488.1"
                     /translation="ACDRCGNPLPLQLWEEFKVMVKLVDNPEEMNDQEEDPDVYYISR
                     GESHLHLADWIYEFINLSIPLQKMCAPGEIGGPGCNKEVLEKLANIETGGKSDSNPLW
                     KGLDKFKDLK"
BASE COUNT          520 a          505 c          422 g          558 t
ORIGIN      
        1 tttacgatgt ggatctcgca cacccgaatt atgctgccac tcaattcgtg atagaaagat
       61 tttctgaatc atgcttcgat cattcaacga ggcatttgat tgaagagata aagaaattac
      121 ccatcgcgaa aaaacacagg ccattcaatc cgcaatctgg ccaacataag aaattcctcg
      181 agcaacatct cgcaaaaacg acaacgttgc aaagccagca tccgtacttg aatttcagtg
      241 aggaactaaa ttacttttcg gtcagatcct gatcatcgat gagcgttaat tccctgaatt
      301 ctgatgatcg aagcgctcat gagatcgtcg cgaatgacga tcgcgaaacg gttccatgtg
      361 ctgtgttggg agcttttaga acgtccgggc acgtcagcgt tcgcgtatca ttctcaggcg
      421 tgaaacgcat tccgaatggc accgcagaga tcggtctcaa ccattttctg cgccagcaaa
      481 agcatattgt aaaaagcagc accactgctt attccgtgcc caatgataac aggcttcgca
      541 acacctaaaa tgggcgtgcc tccataattt tcgtagtcga accggtcaat gaattcatcc
      601 gcatgaacgt tgcggctctt ggcaatatca taaaaagatt cggccatctt caagacaaca
      661 tttccggtat agccgtcaca aactgtgacg tcagcgccat cataaaaaat gtcccttccc
      721 tccacattgc caataaaatt tattttgctg ttctctttca acaacggaaa gcttgcctgg
      781 cataatgcgt tgcctttgcc ctcttcttcc ccgacattta acaggccgac tttcggattt
      841 tcaattccgg aaataatttt cgcgtacaag gtaccgagga gggcgaattg gtcaagatgc
      901 tgcggcttgc aatctacatt caggcctaca tcaacgatca agcccgtagc accgccgatc
      961 tttggtacca ctgaaccgat cgtgggccgt agtattccgt ccaggggttt taaaaagaac
     1021 atggcgccca ccagcatggc accggtattg cctgcgctca cgaacgcatc tatcttccct
     1081 gaagcgagta attgaaatcc tttcgggatc gaggcttctg gcttttcttt taatgcgcgg
     1141 gtaggaggct cgtgataacc aatcacgcct gaagtgggta cgactgaaat gttttgctgc
     1201 ggaatcttgt gttcaagcag cagagggctg agttcttctt cgtcaccgat gcaaacaacg
     1261 gtgatgtctt tgatcccgct ctcgaaatag cgctgcaaac cttttacagc ttccagcggc
     1321 gcaaaatcgc cgcccatcat gtcgagagcg agcttcattc gcaactaaat taagagaagg
     1381 aactaagctt tcaaaggagc tttttcagaa acgactttgc ctttgtagta caattttcct
     1441 tcactcacgt gtgcgcgatg acgaacatgc agctcgccag ttgtactgtc tttgcttaac
     1501 gttacttcct gcgccttata atgcgttctt ctcttcgcgc tgcgctgctg agaatgtctg
     1561 cgtttcggat ttggcatatt tcaaattttt aaagtggatc ttctctcgat ttttttgtga
     1621 accaaagagg cacaaagggc acgagacaga ccaccaattt ataaacttat ttaagatctt
     1681 taaacttatc gagtcctttc cataagggat tcgaatcact tttgccgccc gtttctatgt
     1741 tggcaagctt ttccaaaact tccttattgc atcccggacc gccgatttca cccggtgcac
     1801 acattttttg caatggaatg ctcaggttaa tgaattcgta aatccagtct gccaggtgca
     1861 aatgactttc tccgcggctg atataataaa catcaggatc ttcttcctgg tcgttcattt
     1921 cttcagggtt atccaccagc ttcaccatta ccttaaattc ttcccaaagt tgcagtggta
     1981 aaggatttcc gcagcggtcg caagc
//
LOCUS       DASQJI010000752         7958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_109488,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000752 DASQJI010000000
VERSION     DASQJI010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7958
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109488"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            734..1906
                     /locus_tag="VEV83_20070"
     CDS             734..1906
                     /locus_tag="VEV83_20070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HYK47489.1"
                     /translation="MDKNTAVDSTIFYDSDLICFSHLRWKFVFQRPQHLLTRFSKLTR
                     VFYFEEPVFGTEKKLHIENFTDNIYVITPHLPEKLAKAEIDEQLERMIDLLISQKNIE
                     RYSCWYYTPMALDFTGHLKPEMLIYDCMDELSAFKFAPPELLNNEKKLLERADIVFTG
                     GYSLYYAKQHLHPNIHPFPSSIDKEHFAQARILKNEPEDQKDVPHPRFGFFGVLDERF
                     DLDLVAAVAKQKPDWHFILVGPVVKIDPAVLPRLDNIHYAGPKQYNELPQYLAGWDVA
                     IIPFAINESTKYISPTKTPEYLSGGKPVISTPIRDVVSPYGDNDLVHIVSDATDFIRA
                     GEIELDKKDRRSWLRRVDAFLASNSWDNTFEEMLTLIERTWKQINNKTTLKVKTYV"
     gene            1899..3101
                     /gene="glf"
                     /locus_tag="VEV83_20075"
     CDS             1899..3101
                     /gene="glf"
                     /locus_tag="VEV83_20075"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009273 - peptidoglycan-based cell wall
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HYK47490.1"
                     /translation="MFDYLIVGAGFAGSVLAERLASQLHKKVLIVEKRNHIAGNAYDY
                     YNKDGILIHKYGPHIFHTNSKKVFDYLSQFTPWRPYEHKVLASVDGQLVPIPINVNTI
                     NRLYCLNLSCADAEKFLALKAEHIPRIRTSEDVVVSKVGRELYEKFFQGYTRKMWDLD
                     PSELDASVTARVPTRTNKDDRYFTDTYQAMPLYGYTHLFQKMLSHPNIKVMLNTDYKE
                     VIDMIPHKNLIYTGPIDEYFNYCYGKLPYRSLEFQFETLDCESFQPTGTVNYPNSQAY
                     TRITEFKHLTGQKHSKTSIVYEFPKAEGDPYYPVPRAENAEIYKQYQRLADSMTNTYF
                     VGRLATYKYYNMDQVVAQALTTFSKIKETPHEIMHEVKHEKSYTNEQKSIVLPLTTVT
                     NRPMNNAL"
     gene            complement(3181..4164)
                     /locus_tag="VEV83_20080"
     CDS             complement(3181..4164)
                     /locus_tag="VEV83_20080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK47491.1"
                     /translation="MKHVSILIPQGHTSVVNIEGTHQILSYVNLFCDEMGREAVFKVQ
                     LVGIAHETKQTTGLFTINPDVLIKDVKRTDLIIIPAIHGDHQQAMENNRAFVPWIIEQ
                     YKAGAEVVSFCVGAFFLAGTGLLTGKQCATHWSMANEFRRLFPDVQLMDDKIMTEEDG
                     IYTSGGAYSYLNLLLYLVEKHAGRDIAILTSKTFMIDIDRDSQSPFIMFRGQKSHEDE
                     PVKKAQEFIEQNYQDKITVDQLAAMLALGRRSLERRFKKATCNTVIEYIQRVKVEAAK
                     KDLETSRKNINEVMYNVGYNDTKAFRTIFKKTTGMTPIDYRNKYNREVMVV"
     gene            complement(4466..5050)
                     /locus_tag="VEV83_20085"
     CDS             complement(4466..5050)
                     /locus_tag="VEV83_20085"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HYK47492.1"
                     /translation="MSSKQKKNIAIFASGTGTNAANIIRYFSEKRTAQIALIVSNNPT
                     AGVLKIAEENNISTLLLQKEKFFRGDAYVPELQHAAIDFIVLAGFLWKLPSALINAYR
                     DNIINIHPALLPKYGGKGMYGNFVHEAVLSTKEKESGITIHFADEFYDNGKIIFQTTC
                     PVYENDTSETLAKRIHELEYKYFPVVIEEVIAKL"
     gene            5202..6458
                     /locus_tag="VEV83_20090"
     CDS             5202..6458
                     /locus_tag="VEV83_20090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HYK47493.1"
                     /translation="MFKQRRIATIRTTTFSSFFFISVLFSLSSFAQDGHALFLANCAS
                     CHAVNKRLTGPALAGLEERGPWSDRKQLYAWVHNPPGYMKKDPYTAGLQKEYQVVMTP
                     FPGLSEKDIDAIVGYIDQQAKAASAAPAGGPAGEAANPETGDKSLLFGILTLILAIVA
                     FTLLYINANLKKMADDKEGIPAHEPIPFWRNKSYITIATLILFLIGGYYITEGAVGLG
                     RQQSYEPQQPIYFSHKVHPGANQINCQYCHVGVYQGKQATIPSVNICMNCHMAINEYK
                     GEKLVNADGNEVNGTAEIQKLYKYAGYEPGKPWDASKAKPIEWVRIHNLPDHVYFNHA
                     QHVNAGRVQCQTCHGEITSMNEVYQFAPLSMGWCLNCHRTTKVQFDNNGFYSMYEKYK
                     EDIKNHRMDSVTVKDIGGAECQKCHY"
     gene            6577..>7958
                     /locus_tag="VEV83_20095"
     CDS             6577..>7958
                     /locus_tag="VEV83_20095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-variant-translocated molybdopterin
                     oxidoreductase"
                     /protein_id="HYK47494.1"
                     /translation="MDQKKYWQNFTELNESEAFKKASTDEFREELPFEFADSFLKAST
                     QRRDFLKYLGFSTTAAVLAASCEVPVRKSIPFVNKPEDIVPGIANYYATTYVQDGEAI
                     SVVAKVRDGRPIKIEGNTLSPITKGGTSAKVQASVLGLYDTARLRFPTIDGKEVTLAY
                     IDQAIGAALAGLGGAPIVLLTSTVNSPTTLEAINQFLAKYPGSRHVVYDADSYSGMLL
                     ANEASKGKRALPSYRFDKAKVVVSLGADFLGTWLSPVEFASQYAVGRKIDEKNPAMSR
                     HIQFESILSMTGCNADERYVHRPSETGAVAVALLGALNGQGASNISDPKLKGGIEKAA
                     KELSANRGAALVVCGSNDVNVQLVVNAINDAIGASGNTIDWSVTNKTKAGVDTDIAKL
                     VNDMNSGAVGALLVQGANPAYTWNNAKGFVDGLKRVRVAVSFNPKNDETTQLCKYVIP
                     DHHYLESWGDA"
BASE COUNT         2309 a         1672 c         1746 g         2231 t
ORIGIN      
        1 tttttgtcga tcttatttac ggaatgcaat ttgtttttta ttagggtaac cattcaccct
       61 agaaaatgaa tttaactgag gtaagagctt cgaggttcgg aaaaggctta ttcgcagtaa
      121 aaaaaatccc cgctcattca gtcatctgta aagcaaccgg cgttcgttta gattttaatg
      181 aaacgcttcg gttagcagag cgcgaaagtc attgtcttca gattggtgct gataaatata
      241 tatactgcca gccaccgttt ctatacagca atcattcatg cgagccaaac tgcggcgtga
      301 atgcagatct tgaactattt actttgagag acattttttc gggcgaagaa ctgctttggg
      361 attattcaac atcaatgttt gaaaggcatt ggaccatgca gtgcaattgc ggttgtaaag
      421 agtgtcggca tgttattcgg gattttgatt tgttgccgct tcaactgcaa aaaaaatatt
      481 taaggatgaa tatcgtgttc ccgttcatta aagaaatgtt gtcgcaacgg caatatgcaa
      541 aagtgtaatt caagagtcaa gtgaacatgt tcgtcgaagt ttcaagattc tgttcatcac
      601 tatatttctg ttgtcactga gaattttttt ccacaggcac acaaaaaaat attatttgat
      661 ttttaaaaaa tatcaaaaag tgctttcaat ctatgcgtaa aataaatggc acgtaaatcg
      721 tacttattca ggcatggata aaaacaccgc cgttgactca acaatatttt atgattctga
      781 tctgatttgt ttttcgcact tacgctggaa attcgttttc cagcgtcctc agcacttgtt
      841 aacccgcttt tcgaaactta cacgcgtatt ttattttgaa gaacccgttt ttggaactga
      901 aaaaaaattg cacattgaaa atttcaccga caatatatat gtaatcacgc cgcatctacc
      961 ggaaaaattg gcaaaagcag aaatagatga acagcttgaa cgcatgatag atctgctgat
     1021 cagtcaaaaa aatattgagc ggtattcttg ttggtactac acgccgatgg cgcttgattt
     1081 taccgggcat ttaaagccgg agatgctgat ctatgattgc atggatgaat tatcagcctt
     1141 caagtttgct cctcctgaat tattaaataa cgagaagaaa ttattggaac gagccgatat
     1201 agtttttaca ggcggataca gcctgtacta tgcaaagcag catctgcatc ccaacataca
     1261 tccctttcca agcagtatcg ataaagaaca tttcgcgcag gcaagaatct taaagaatga
     1321 gccggaagat cagaaggatg ttcctcatcc aagatttggt ttttttggtg tgcttgatga
     1381 acgcttcgat cttgatcttg ttgccgccgt ggctaaacaa aaaccggatt ggcatttcat
     1441 actggtcggt cctgttgtaa agatcgatcc tgctgtactg ccacggcttg ataatattca
     1501 ttatgccggt cctaagcaat ataatgagct accgcaatat ttagccggat gggatgttgc
     1561 gattattcct tttgcaatta acgagtccac aaaatacata agcccgacaa aaacaccgga
     1621 gtatctctca ggtggaaagc ctgtgatttc tacacccata agagacgtgg tttctcctta
     1681 tggagacaat gacctggtgc acattgtatc ggacgcgact gattttatcc gggcaggtga
     1741 aattgaactg gataaaaaag acaggcgatc gtggctccgc agggttgatg catttcttgc
     1801 atccaactcg tgggataata cgttcgaaga gatgcttacg ctaatagaaa ggacgtggaa
     1861 acaaattaat aacaaaacaa ccttaaaagt gaaaacatat gtttgattat ttaattgtag
     1921 gagccggctt cgccggcagt gtgcttgctg aacgtttggc ttcacaactt cataaaaagg
     1981 tgctaatcgt tgaaaaacga aatcatattg cgggcaatgc gtatgattac tataacaagg
     2041 atggaatttt aatacataaa tacggcccgc atatctttca cacaaactcg aaaaaagttt
     2101 ttgattattt gagtcaattt actccctgga gaccttatga acataaagtg ctggcaagcg
     2161 ttgacggcca gcttgtaccg atcccgataa atgtgaacac gatcaacagg ctctattgtc
     2221 ttaatttatc gtgtgccgat gctgaaaagt ttcttgcttt gaaagcggaa cacatcccac
     2281 gcatcaggac ttctgaggat gttgtggtga gtaaagtcgg cagggaattg tacgaaaaat
     2341 ttttccaggg ttacacgcgc aaaatgtggg atctcgaccc ttcagagctg gatgcgagtg
     2401 taaccgcacg cgttcctacg agaacgaata aagatgaccg gtattttacg gacacctacc
     2461 aggcgatgcc tttgtatggt tacacgcatc tctttcaaaa aatgctctcg catccgaata
     2521 ttaaagtgat gctgaataca gattataaag aggtgatcga tatgattccg cacaagaatc
     2581 ttatttatac ggggcccatc gatgaatatt ttaattactg ttatggcaaa cttccatatc
     2641 ggtcgctgga atttcagttt gaaacgctcg attgcgaatc gtttcagcct acaggcacgg
     2701 taaattatcc caatagccag gcatacacgc gcataacgga attcaaacac ctgacaggtc
     2761 agaaacattc gaagacctcg atcgtgtatg aatttccaaa ggcagaaggc gatccttatt
     2821 atcctgttcc gcgcgccgaa aacgcagaga tctataaaca atatcagcgc ctcgcagatt
     2881 ctatgactaa cacctatttt gttggcaggc tcgccaccta caaatattat aacatggacc
     2941 aggtggtggc acaggcatta actacattca gtaagatcaa ggaaacaccg catgaaatca
     3001 tgcatgaagt gaagcatgaa aaatcttaca cgaacgaaca aaaaagtatt gttctgcctt
     3061 tgaccacggt cacgaacagg cccatgaata acgcacttta agatccgccg tgaaaaacca
     3121 ggccgccccg gcaacaccgg ggcggttttt ttatgtgtga acgattatta tgtccctgca
     3181 tcacaccacc attacttccc tgttatattt gtttctgtaa tcgatcggcg tcatgcctgt
     3241 ggttttttta aagatcgtcc tgaacgcctt tgtatcgttg taaccgacat tatacatgac
     3301 ctcattgata tttttccggc ttgtttcaag atcttttttt gctgcttcga cctttacgcg
     3361 ttgaatatat tcgattacag tgttgcatgt agctttttta aacctgcgtt cgaggcttct
     3421 tcgtccgagt gcgagcattg cagctaattg gtcgacagtg atcttatcct ggtaattttg
     3481 ttcaatgaat tcctgcgctt ttttcacggg ctcgtcttcg tgcgattttt gtccacgaaa
     3541 cataatgaat ggggactgac tatcgcgatc gatatcgatc ataaatgttt ttgacgtaag
     3601 gatggcaata tcgcggcccg cgtgtttttc gaccaggtac aacagtaagt tcaaatacga
     3661 gtatgctccg ccactggtgt aaataccgtc ttcttcagtc atgatcttat catccattaa
     3721 ctgcacatcg ggaaacaagc ggcggaattc atttgccatc gaccagtgcg ttgcgcattg
     3781 ctttccggtg agcaagccgg tgcccgccag gaaaaatgca cccacgcaaa aactaaccac
     3841 ttcggcgccc gctttgtatt gctctatgat ccatggaaca aacgccctgt tgttttccat
     3901 cgcttgttga tgatcgccgt gaatcgcggg aataattata aggtctgttc tctttacatc
     3961 ttttatcagc acgtcgggat tgatcgtaaa taacccggtc gtttgctttg tttcatgcgc
     4021 aatgccaacg agctgaactt taaacaccgc ttctcttccc atttcatcgc aaaacagatt
     4081 tacatacgaa aggatctggt gtgttccttc aatgtttacc acgctggtat gtccctgcgg
     4141 aataagaatt gacacgtgct tcatatccgg tcttaatttt taaaaacgta aaagtagaaa
     4201 atctctttgt cgcaatcaac accccaggat ggcggattta ccccgtgaat tggcaattgt
     4261 gaatcgtgaa tgcgctttcg aagttccttt cctttcgaca aagtaaaaat gactctcgac
     4321 gaaattccgg cggactagta ccgtgaacat tgaaaaaact tacgatcgac aatttgtgat
     4381 cgccagaaat gagataagcc gttggttact catcatcgtc agaaattata ttcaccattg
     4441 accattcact attcacaacc agcatttaaa gcttggcaat cacttcttcg atcacaaccg
     4501 gaaaatattt atactccagc tcatgaattc ttttggcgag agtttccgaa gtatcatttt
     4561 cgtaaaccgg gcaagtcgtt tgaaaaataa tttttccgtt gtcataaaat tcgtccgcga
     4621 aatggatcgt gatgccgctt tctttttctt ttgtcgacag cactgcttca tgtacaaaat
     4681 ttccatacat gcccttgcca ccatattttg gaagtagtgc cggatgaata ttgatgatgt
     4741 tatcccggta agcgttaata agcgctgaag gaagcttcca taaaaatcca gccaggacga
     4801 tgaaatctat agccgcgtgc tgtaactcgg gcacataagc atcgcccctg aagaattttt
     4861 ctttttgaag caacagtgtt gagatgttat tttcttctgc gatctttaaa acgcctgcag
     4921 ttggattgtt tgaaacgatc aatgcaatct gtgccgttcg tttttccgaa aaataacgaa
     4981 tgatattcgc cgcatttgtg cctgttccgg aagcaaaaat cgctatgttc tttttctgtt
     5041 ttgagctcat gaaaactgtg caaattaaat gctttcaaag cgcatattat caacgagaaa
     5101 catggttaaa aaaaattttt aatgaaatgt gaattgtcac catcctgtca tatttttgcc
     5161 gcgtcggcac attcccaaca tcgcaccaat cgacacgtga tatgttcaaa caaagacgaa
     5221 tagccacgat cagaactact acattttcca gctttttttt tatctcagtc ttattttctc
     5281 tttcgtcttt tgcgcaagac gggcatgcat tattcctggc taattgtgcg tcctgccatg
     5341 cggtgaacaa acgattgacc gggcccgcgt tagcaggttt ggaagaacgc ggtccatgga
     5401 gcgacagaaa acagctgtac gcgtgggtac ataacccgcc gggatacatg aaaaaggatc
     5461 cttacacggc tggcttgcag aaagaatacc aggtggtaat gactccgttt ccgggtcttt
     5521 cagaaaaaga tattgatgcc atagttggct atattgatca acaagcaaag gcagctagtg
     5581 cggcgcctgc tggtgggccg gcgggtgaag cggcgaatcc cgagacgggc gataaatcat
     5641 tgctctttgg aatactcacg ttgatccttg ctatcgttgc atttacgtta ctatatatca
     5701 acgccaactt gaaaaagatg gcagatgata aggaaggtat tcctgctcat gagccgatac
     5761 cattctggcg taacaaaagc tacatcacga tcgccacttt gatattattc ttaattggag
     5821 gttattatat cacagaaggc gcagtaggat tagggcggca gcagagttat gaacctcaac
     5881 agccgattta tttttctcat aaagttcacc caggggcaaa ccagatcaac tgtcaatatt
     5941 gccacgttgg tgtttaccag ggcaagcagg ccacaattcc ttctgtgaat atttgtatga
     6001 attgccacat ggcgatcaat gaatacaaag gagaaaagct ggttaatgct gacggtaatg
     6061 aagtaaacgg caccgccgaa attcaaaaac tatataagta cgccggttat gagcccggca
     6121 agccgtggga tgcgagcaaa gcaaagccga tcgaatgggt ccgcattcac aatcttcccg
     6181 atcatgttta ctttaatcat gcgcagcatg taaatgcagg aagagttcaa tgccaaactt
     6241 gtcacggaga aattacttcc atgaatgagg tttatcaatt tgctccgtta agcatgggat
     6301 ggtgcctgaa ctgccaccgc actacaaaag ttcaatttga taacaatggt ttttacagca
     6361 tgtacgaaaa gtataaggaa gatattaaga atcacaggat ggatagtgtt acggtaaaag
     6421 atattggcgg cgctgagtgc cagaaatgtc attattgaga agctttcttg atggcgaaga
     6481 ggttgtacac taaaattgat tagtaatatt tattattaac ttcttaagtc tttattcagg
     6541 atttaaggca acatcccgcc tcgcgggatc ggtaatatgg atcaaaaaaa gtactggcaa
     6601 aattttactg agttgaacga gagcgaagcc ttcaaaaaag cgtcaacaga tgaatttcgg
     6661 gaagaattac cttttgaatt tgccgacagt tttctaaagg cctccacgca aagacgagat
     6721 tttttgaaat atctcggctt tagtacaact gctgccgtgc ttgccgccag ttgcgaagta
     6781 cctgtaagaa aatcgattcc ttttgtaaat aagcccgagg atatcgttcc gggcattgcg
     6841 aattattatg ccaccactta tgtacaggat ggcgaagcga tcagcgttgt ggcgaaagtg
     6901 agagatggca ggcctataaa aatcgaaggc aatacattgt cgccaattac taagggcggc
     6961 acctccgcaa aagtgcaggc gtcagttctg ggtttatacg acacggcacg gctacgattc
     7021 cccactatcg atggaaaaga agttacactt gcttatatcg accaggcgat aggcgccgca
     7081 ttggctggtc ttggaggcgc accgatagtg ctccttacga gcactgttaa ttcgccaaca
     7141 accctggaag cgatcaacca gtttttggca aagtatccgg gcagcagaca tgttgtttat
     7201 gatgctgatt cttatagcgg catgctgctc gcaaacgaag catccaaagg taaaagagcg
     7261 cttccttcat accggttcga caaagcaaaa gttgtagtaa gcctgggtgc tgatttcctg
     7321 ggaacatggt taagcccggt ggaatttgct tcgcagtacg ccgttggcag aaagatagat
     7381 gagaaaaatc ctgcgatgag caggcatata cagtttgaat cgatattgag catgaccggt
     7441 tgtaacgccg atgagagata cgtccatcgt ccgtctgaaa ccggcgccgt ggccgttgca
     7501 ttattaggcg cattgaacgg acaaggtgca tcaaatataa gtgacccgaa attaaaagga
     7561 ggaatagaaa aggctgcaaa ggagctctcg gctaatcgtg gagcggcact cgttgtatgc
     7621 ggaagtaacg acgtaaatgt tcagctggtt gtaaatgcga tcaacgatgc aattggcgca
     7681 tcgggaaaca cgatcgactg gtcggttaca aacaaaacaa aagcaggcgt tgataccgat
     7741 atcgcaaagc tggtgaatga catgaactcc ggcgctgtcg gtgctttact cgttcaaggt
     7801 gcaaatcctg cttatacatg gaataacgcg aagggatttg ttgatggctt aaaaagagtt
     7861 agggtagctg tttcattcaa tccaaaaaat gatgaaacga cacagctttg caagtacgtg
     7921 atccctgatc atcattacct tgaaagctgg ggcgatgc
//
LOCUS       DASQJI010000753         3885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_724534,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000753 DASQJI010000000
VERSION     DASQJI010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724534"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1559
                     /locus_tag="VEV83_20100"
     CDS             <1..1559
                     /locus_tag="VEV83_20100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HYK47495.1"
                     /translation="MFLPQVVKSARVMKKSVAYLTPFIDAEKLLVSKNNLNFEEQKGA
                     AKILLATVKGDVHDIGKNIVGVVLGCNGYNVIDLGVMVPADKILETAEKESVDIIGLS
                     GLITPSLDEMVHVAHEMKRRKMHQPLLIGGATTSRTHTAVKIAPQYDNGVLHVLDASR
                     SVAVVTNLLNENQKKNVLEQVKKEYSNLREQFLNKQSQKNLIPYEEAVVLKEYLDWKN
                     YQPVTPAVDGIKVFKAFDLATIARYIDWGPFFIAWEMPGKFPDVLEDPIFGVEATRLH
                     QDATALLKQVIDENWFTADGVIGFWPASSNNRDTVTVTTGDGEINLEFLRQQLKKAIG
                     QPCYSLADFIRPGEFGRDFIGAFAVTIHGAKQQSDNFSAQHDEYNKIMVQVLADRLVE
                     AFAECLHEQVRKEHWGYAKDEHLTREELIRENYKGIRPAPGYPACPDHTEKIKLFQLL
                     RIKESIDIQLTESLAMNPPASVCGWYIAHPQSHYFGLGKIQRDQLQDYAMRKGMAIDD
                     AERWLRTNLE"
     gene            1684..2592
                     /locus_tag="VEV83_20105"
     CDS             1684..2592
                     /locus_tag="VEV83_20105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HYK47496.1"
                     /translation="MEFGRVEPEELNEIDFHLPPEPPSNKNILTGRKKPNAKVFIGCS
                     KWGRLEWIGKIYPSGTKEKDFLQHYVKHFNSIELNATHYKVYGPKAIENWRLKSEGRD
                     FLFCPKMYKGVTHFGKLTDKDFLINEFLRGVLTFKEHLGPILVQVSDAYGPKRKADLF
                     EFLESLPTDVQFFLEVRHPDWFAKEDMRNELMDTLRRLKIGAVITDVAGRRDCAHMHL
                     TIPKAFIRFVGNSLHETDHTRVDAWVDRMKSWLAHGIEQIFFFMHMHDEATSPELAVE
                     LVDKLNAACGLNLLKPKFLKEPVLAR"
     gene            complement(2638..>3885)
                     /locus_tag="VEV83_20110"
     CDS             complement(2638..>3885)
                     /locus_tag="VEV83_20110"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HYK47497.1"
                     /translation="FRPELRERPVVVLSNNDGCIVSRTDEAKRLGIEMAGPYFKARPL
                     IEENDVTVFSSNYNLYGDMSWRVMETLRLLVGEANVEVYSVDEAFLNLTDFSAEHLQE
                     IALKIRHTVERWTGVAVSVGVAQTKVLCKVANHIAKKSKNATQCVTVLDSKHKINEAL
                     ASTEIKEIWGVGRQYADKLTSFGIYDALTLSKMPEEWAKKNLGGVVGVRLIKELKGEP
                     AIVMDEPLIEKKMIATTRMFGTPVTELKDIKEAVATYTSRAAEKLRRQFGAASVVSVF
                     VVPKEERPRGERFKHGRMISEAVVLSNATSVTSELIKPAVYLAEKVFRIANKERPSLF
                     KKAGVTLSGIVKDELLQGNLFRPSLKNNGRLLMSMMDNINFSMRDDILKFAASGTARN
                     WKMRQEWRSPRYTSRWDELRVVE"
BASE COUNT         1081 a          867 c          903 g         1034 t
ORIGIN      
        1 aaatgtttct gccgcaggtt gtgaaaagtg cgcgggtcat gaaaaaaagc gtggcttatc
       61 taacgccgtt cattgatgca gaaaaactac tggtaagcaa gaacaatttg aatttcgaag
      121 aacagaaagg cgcggcgaaa attttgctgg caacggtgaa gggcgacgtg cacgacattg
      181 gaaaaaatat tgtcggtgtt gtgcttggat gcaatgggta caacgtaatt gacctcggcg
      241 ttatggtacc agcagataag atcttagaaa cagccgaaaa ggaaagcgtt gatattattg
      301 gactgagtgg gctgatcacg ccttcgctcg acgagatggt tcatgtggcg catgaaatga
      361 agcgccgcaa gatgcatcaa ccgttactga ttggcggtgc aacaacgtca cgaacacata
      421 cggctgtgaa gatcgctccg caatatgaca atggcgtgtt acatgtactc gatgcatcgc
      481 ggagcgtggc ggtggtaact aatctcttga atgaaaatca aaaaaagaat gtgctcgagc
      541 aggtaaagaa agagtacagc aatctgcgcg aacagttcct gaataagcag tcgcaaaaaa
      601 atttaattcc gtatgaagaa gcagtagttt taaaagaata tttggactgg aaaaattacc
      661 agccggtaac gcctgcggtt gatggaataa aagtgtttaa agcttttgat ctcgcgacga
      721 tcgctcgata cattgattgg ggaccatttt ttattgcgtg ggaaatgccc ggcaaatttc
      781 cggacgtact ggaagatccg atcttcgggg ttgaagcgac gcggctgcat caggatgcaa
      841 cagctttatt aaaacaagtt atcgatgaaa attggttcac tgccgatggc gtgataggat
      901 tctggccggc atcaagcaac aaccgcgaca cagttactgt aacaactggc gacggcgaaa
      961 tcaacctcga gtttttgaga caacaactaa agaaagcaat tgggcagccc tgttatagtt
     1021 tggccgattt tattcgtcct ggtgaatttg ggcgtgattt cataggtgca tttgcggtta
     1081 cgatccacgg cgcaaaacaa cagtccgaca acttttctgc acaacatgat gagtacaaca
     1141 agatcatggt gcaggttttg gccgaccgcc tcgttgaagc attcgctgaa tgtttacatg
     1201 agcaagtaag aaaggaacac tggggttatg caaaagatga gcatctcacg agagaagaac
     1261 tgatcaggga aaattacaaa ggcattcgtc ctgcaccagg ttatccggct tgtcctgatc
     1321 atacggaaaa aattaagttg tttcagctgc tgaggataaa agaaagtatc gacatacaac
     1381 ttaccgaaag ccttgcgatg aatccacctg catccgtttg cggctggtac atcgcccatc
     1441 ctcaaagtca ttattttggt ctcggaaaaa tacaaagaga tcaactccag gattacgcaa
     1501 tgcgtaaggg aatggcaatt gacgatgcag aaagatggtt gaggacgaac ctggagtaaa
     1561 cgcaatgcac agcgtgttca ataattgccg gaagtctggc ataattcctg cggattaacc
     1621 gcaagattga cgaagaagac cattgcttga attgcagatc cgtaactaca aaagcatttt
     1681 ctcatggaat ttggccgggt tgaacctgaa gagttaaacg aaattgattt tcatttaccg
     1741 ccggagccgc catcgaataa aaacattttg actggcagaa aaaagccaaa cgcaaaagtt
     1801 tttatcggtt gttcgaaatg gggaaggctt gagtggatcg gaaagatata tccgtccggt
     1861 acaaaagaaa aggattttct ccagcattat gtgaagcact tcaactctat tgaattgaat
     1921 gcaacgcact ataaagtgta tgggccaaag gcgattgaaa attggagatt gaagtcagag
     1981 ggaagggatt ttctcttttg tccaaagatg tacaaaggag ttacccattt tggaaaactg
     2041 acagacaaag attttctcat caacgaattt ttgcgcggtg ttttgacttt taaggagcac
     2101 ctcggcccta tcctggtaca ggtaagcgac gcatatgggc caaagcgaaa ggcagatttg
     2161 tttgaatttc tggagtcatt accaaccgat gtgcaatttt tcttagaggt acgacacccg
     2221 gattggtttg caaaagagga catgcggaat gagctcatgg atacacttcg tcgattaaag
     2281 ataggcgctg tgatcaccga tgttgccggc aggcgagatt gtgcacacat gcatctgaca
     2341 attccaaaag catttatccg tttcgttgga aacagccttc atgaaaccga tcatacccga
     2401 gttgacgcgt gggtggatcg tatgaaatcc tggctggcac acgggatcga gcaaatattt
     2461 ttcttcatgc acatgcacga tgaagcaact tcgcccgaac tggctgttga attagttgat
     2521 aaactaaatg cagcctgcgg cctgaattta ttgaagccga aatttctaaa ggaaccggta
     2581 ctggcgagat gaaacccgtg cactcataat aagacccgac acctgtatta aataaattca
     2641 ttcgaccacc cttagttcgt cccagcgact tgtatatctt gggcttcgcc attcctgccg
     2701 catcttccaa ttcctcgcgg tgcctgaagc cgcgaacttg agtatatcat cgcgcatgct
     2761 gaagttaata ttatccatca tgctcatgag taggcgtccg ttgtttttca acgacggccg
     2821 gaacaggttg ccctgcagca actcatcttt tacaattccg ctgagtgtta ccccggcttt
     2881 cttaaacaag ctcggccttt ctttatttgc gatcctgaaa actttttctg ccaggtaaac
     2941 ggcaggcttt attaattcgc tcgtcaccga agttgcgttc gacaacacca ctgcttcact
     3001 aatcatacga ccgtgtttga aacgttcgcc tcgtggacgt tcttcttttg gcactacaaa
     3061 cacacttact acggaggccg caccaaattg tcggcgcagc ttttccgcag ctcttgaagt
     3121 gtaggtagca acagcttctt ttatgtcttt taattctgta acaggcgttc caaacattcg
     3181 cgtcgtcgct atcatttttt tctcgataag tggctcgtcc atcacgatcg caggttcgcc
     3241 cttcagttct tttatgagtc gaacgccaac aacgccgcct aaatttttct ttgcccactc
     3301 ttcgggcatt ttgctgagtg tgagtgcgtc atagatgccg aacgatgtaa gcttgtcggc
     3361 gtactgcctt ccgacgcccc atatttcttt aatttcagtc gacgcgagcg cttcatttat
     3421 tttatgtttg gaatcaagca ctgttacaca ttgcgtggca ttcttacttt tcttggcaat
     3481 gtgattggca actttgcaaa gcacttttgt ttgtgcaacg ccgactgaca ctgccacacc
     3541 agtccatcgc tcaacagtgt gccggatctt cagcgctatt tcctgcagat gttcagcgga
     3601 aaaatcggtc aaattcaaaa acgcttcatc aactgaatat acttccacgt tcgcttctcc
     3661 aaccagcagg cgcagtgttt ccatcacccg ccagctcata tctccgtata aattatagtt
     3721 tgacgaaaac acagtcacgt cgttctcttc tatcaaaggc ctggctttga aatacgggcc
     3781 tgccatttca attcctaatc tttttgcttc atccgtgcga ctgacgatgc aaccgtcgtt
     3841 attgcttaac actacgaccg gtctttccct gagctccggc ctgaa
//
LOCUS       DASQJI010000754         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_109938,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000754 DASQJI010000000
VERSION     DASQJI010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109938"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..681
                     /locus_tag="VEV83_20115"
     CDS             97..681
                     /locus_tag="VEV83_20115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47498.1"
                     /translation="MSTRTLGLLGILGSPFLAIQLSMSGIFENSVPTSLGGIFGLIYM
                     TGWFCSILGLYKLNAAGNKKGGTILIIQMVLLTVGNLWNVYSIINPTCNTMLYNITDA
                     IGWPFDNLFMLATGIAIVSAKQLHGWKRFVPLFVGLWFPVTLVLTRLIFGSSNAELFI
                     TSLYSIIGWSLLGLVVYTSSCKDMRSDILYPASS"
     gene            971..>2574
                     /gene="pta"
                     /locus_tag="VEV83_20120"
     CDS             971..>2574
                     /gene="pta"
                     /locus_tag="VEV83_20120"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HYK47499.1"
                     /translation="MSKNIFIATAEPYSGKSIIAIGLVNMLLGKAKKVGYFKPIINSD
                     SKEKKDEHISTVIQYFGLDVNYDDTYAFTRSQALRMIQKSSQGEMIDTIIDKFKKLEE
                     AYDFTVIEGSDFVGEGIAFEFDANISIAKNLSAPVIIVTSAENKTTAQVVTSTLTIVH
                     NFQSREVEVLAIVVNRVDSQQCEDVRQLLTLELQGHSIIAVIPFEKSLKSPTMKEIYA
                     RMGGQLLFGVDELSNQVDDFVTGAMQVPGFLNYLTENVVIVTPGDRGDIIISALQANI
                     STSYPKVSGIILTAGILPEEPVMRLIRGSQTIVPIISVPDGTFKTTAKLDSIQSQITP
                     DNKKKIQLAIDVFEKYVDVKALDEKIVTFTPEGITPHMFQYQLVKWAKSEIKHIVLPE
                     GNEDRILKAATRLVDQKIVELTLLGDPLEIAASVKRLGLTLDLNNIRIIDPVRSEYFD
                     DYAQTLYELRKHKNVELEMARDMMTDVSYFGTMMVYKGLADGMVSGAVHTTQHTIRPA
                     LQFVKTKPGVSVVSSVFFMCLPDRVCV"
BASE COUNT          744 a          569 c          585 g          676 t
ORIGIN      
        1 acggattcat tcattattcc acacatacat gcgattgtct tcgcatatcg acgcttctac
       61 ttttgatgca ttcataaacg caaaaaataa attatcatga gcactcggac tttgggatta
      121 ctgggcattc tcggcagccc gtttctcgcc attcaattaa gcatgtcggg catttttgag
      181 aactcagttc ccacttcgtt aggcggcata tttggactga tctatatgac gggctggttt
      241 tgcagcattc tgggtttata caaactcaac gccgccggaa ataaaaaagg cggaactatc
      301 ctgatcatcc agatggtcct tctcaccgtt ggtaatctct ggaacgtgta ttctattatc
      361 aatccgacat gcaacacgat gttatataat attacggacg cgattggctg gcccttcgat
      421 aatcttttta tgctcgcgac cggaatcgca attgtctccg caaaacaact tcatggctgg
      481 aaacggttcg tgcctttgtt tgtaggtttg tggttccctg taacgttggt gcttacacgc
      541 ctgatatttg gcagcagtaa cgcagaactt tttatcacaa gcttgtattc gataattggc
      601 tggtcgctgt taggcctcgt ggtttatacg agttcatgta aggacatgag aagcgatatt
      661 ttgtatccag cgtcttccta aacaaagcgt caggcggttc gttgatctaa tgcacggcgc
      721 aactatcttt aaatgatcat catgtgtggg tgacgaagat cctgatgaaa cgtaatgacc
      781 gcccggttgg ttgcacaagc tgacgcgctg acgaaggaaa acgaaaagcc cacagcgaag
      841 tgaagcgaca acttacagtc ccgatgttaa accaattaac taattaacca ataaaccaat
      901 aaacgaacct caaacctcaa acctcaaacc tttctctctt tatgctattt ttacccacca
      961 ttattcaatc atgtcgaaaa atattttcat cgcgaccgcc gaaccttaca gcggtaaatc
     1021 gatcatcgcc atcgggctgg tgaatatgct actaggcaaa gcaaaaaaag taggctattt
     1081 caagcctatt ataaattcgg attctaaaga aaaaaaagat gagcacatct caactgttat
     1141 tcaatatttc ggtcttgacg tgaattacga cgatacatat gctttcacgc gctcgcaggc
     1201 tctccggatg atacaaaaga gcagccaggg agagatgatt gatacgatca tcgacaagtt
     1261 taaaaagttg gaagaagcct atgattttac ggtaatagaa ggaagcgatt ttgtgggaga
     1321 gggcatcgca tttgaatttg atgcgaatat ttccatcgca aaaaatttaa gtgcgcccgt
     1381 catcatcgtc acttctgctg aaaataaaac cactgcgcag gtggtgacaa gtacgctaac
     1441 cattgttcac aattttcagt cacgcgaagt ggaggtactt gcaattgtcg taaacagggt
     1501 tgacagccaa cagtgcgaag acgttcgtca attgttaacg ctggaactgc aaggccattc
     1561 gataatcgcg gttatccctt tcgaaaaaag tttgaagagc ccgaccatga aggagattta
     1621 tgcacgcatg ggcggccaac tgcttttcgg tgtggatgag cttagcaacc aggtggatga
     1681 ttttgttaca ggagcgatgc aggtgcctgg attcctgaat tacctgacgg aaaatgtggt
     1741 gatcgttaca ccgggtgatc gtggtgatat catcatcagc gcgctgcagg caaatatttc
     1801 tacgagctat ccaaaagttt ccggcatcat actcactgcg ggcattctgc cggaagaacc
     1861 tgtaatgagg ctcatccgcg gatcgcaaac gattgtgccc atcatctcgg ttccggacgg
     1921 cacatttaaa accactgcaa aacttgattc gatccaatca cagatcacac ccgacaacaa
     1981 gaaaaaaata caactggcta ttgatgtttt tgaaaaatat gtcgacgtaa aagcattgga
     2041 tgaaaaaata gtgacgttca ctccggaagg aattacgccg cacatgtttc aataccagct
     2101 cgtaaaatgg gcgaagagcg agatcaaaca tatcgtactt ccggaaggta atgaagacag
     2161 gatattgaag gcagccacgc ggctggtcga tcaaaagatc gtagagctca cattgcttgg
     2221 agaccccctt gagatagcag catccgtaaa acggcttggt ttgacactcg atctgaacaa
     2281 catccggata attgacccgg tgagatcaga atactttgat gactatgcgc aaacattgta
     2341 cgaactacga aagcacaaaa acgtagaact ggaaatggcg agagatatga tgaccgacgt
     2401 gtcatacttc ggcaccatga tggtttacaa aggccttgcg gatggaatgg tttcaggcgc
     2461 ggtacatacc acgcaacaca cgatacggcc cgcgttgcaa tttgtaaaaa cgaagcccgg
     2521 cgtctcggtc gtgtcgtctg ttttttttat gtgcctgcct gatcgtgttt gtgt
//
LOCUS       DASQJI010000755         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1801158,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000755 DASQJI010000000
VERSION     DASQJI010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801158"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1282)
                     /locus_tag="VEV83_20125"
     CDS             complement(<1..1282)
                     /locus_tag="VEV83_20125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47500.1"
                     /translation="MKTKLFFLITSLAVYAANGFPQVSIDWLHSINTHPERGASIARD
                     NSNNTYALGSGGGFIYLTKRDKFGNFKWQVKSTSYLGENAVRVFVDPQGNAVAVGYRY
                     STLHEGPFAVALIVLKYTPAGDLIYKTVIPGTYTYFNNSENRTNITAEMDGAGNIYIG
                     TEGQVTGYPKQGFNAVKVSSAGSVVWVSTETFNIGSNFFYVSNIRLRGNRLGLEGTTL
                     YFTANASTWVLDTTGHSLWSNVSPGILGQDIAFDKNANTYVLTSFNNNFKYDVGLYKF
                     GKTGGIPVTKSYDFGSNELGYGMEMMPNQSLAIMGASTQQNGGLAYLDWVTFRVDLSG
                     NLIWSKRYDKSTGNDEIPRMIKVDASNNIYVTGIGGPFPGGSNLGALQGVTLKYSANG
                     ALKWKSIIDTLGFDGVNLALGTDTSVFVISASASA"
     gene            complement(1506..>2740)
                     /locus_tag="VEV83_20130"
     CDS             complement(1506..>2740)
                     /locus_tag="VEV83_20130"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYK47501.1"
                     /translation="LLLFIIVMTVGIIAGSYVAFYLSSFNAIRIFKALMPQSSQSIFR
                     KGLIVVQFAITIGLMACTLLVSQQLRYSKNINMGFDKDHILVLPLVGETTGQAYPLLK
                     QKLSQIAAVRELCAVSEIPYNGITNNGFIPEGDSKAIIIHQLDVDENFLKTFNINMVL
                     GNFFSKDLPTLNDGYVINETLARTLGWKNPVGKIISRNGEHKVIGVIKDFHFASLHDK
                     IEPLIITNKPWADRYSYLAIKYTTDNTSAFVNDIRQTWKTTVAGAPFDYWFLDDAFNT
                     IYKSEERFRQIFTYFSALSIVLSLAGVFGLVALSLKQRTKEFGIRKVLGARVQDMIGL
                     ATKDFVRMIALAAVLVTPVAWTYINKWLENFAYRIQINWWVFALCGLSVLLITVVIIG
                     FQAIKAALANPVDSLKTE"
BASE COUNT          786 a          618 c          552 g          784 t
ORIGIN      
        1 cagcagaagc gcttgcactt attacaaaca cacttgtgtc ggtgcccagt gctaagttta
       61 ctccatcaaa tccgagtgtg tcgattatgg atttccattt gagcgcacca tttgcggaat
      121 actttagcgt tactccctgt aatgcgccaa gatttgatcc gccgggaaat ggaccaccta
      181 taccggtaac gtaaatatta ttgctggcat caacttttat cattcgcgga atttcatcat
      241 tgcccgttga cttgtcgtaa cgctttgacc atattaaatt tccactgagg tcaactctga
      301 atgtcaccca gtcaagataa gccaaccctc cgttctgctg ggtacttgca cccataattg
      361 ccaggctttg gttaggcatc atttccatcc cataccccaa ttcattgctt ccaaaatcat
      421 acgacttcgt cacaggtatt cctcctgtct taccaaactt gtaaaggccg acgtcgtatt
      481 tgaaattgtt attaaaactg gtaagcacat acgtgttcgc attcttatca aaagctatgt
      541 cctgtcccaa aataccggga cttacgttgc tccacaaaga atggcctgtt gtatcaagta
      601 cccaggtact ggcattcgcc gtaaaataaa gggtagtgcc ttcaagcccc agcctgtttc
      661 ctctcagcct tatgtttgac acataaaaga agttgctacc aatattgaat gtttcggtgc
      721 taacccaaac gacgctgcct gcggaagaaa cttttaccgc attaaatccc tgctttggat
      781 acccggttac ctgcccttcg gttccgatgt agatatttcc tgccccgtcc atctctgcgg
      841 ttatgttggt tctattttca ctgttattaa aataagtgta ggtgccgggg atgactgttt
      901 tgtaaataag gtcgccagca ggagtgtact tcaaaacgat caatgcaact gcaaatggcc
      961 cttcatgcaa tgtagaataa cggtagccaa cggcaactgc atttccctgc ggatcaacaa
     1021 aaacacgaac cgcattctct cccaggtaag aagttgactt cacttgccat ttgaaattcc
     1081 caaatttatc acgcttggtg agataaataa agccgccgcc gctgcctaaa gcatatgtgt
     1141 tattcgaatt atcgcgcgcg attgacgcgc cacgttccgg atgtgtgtta attgaatgga
     1201 gccaatcaat cgatacctgc ggaaatccgt ttgcggcata aacagctaag ctggtaatga
     1261 gaaaaaataa ttttgttttc atggtaattc tttttggtaa ttactggtgt tgcacaggtt
     1321 taagagagca gcatttaatg aggtgggaca gaaagttcgg gtaacgcaat cctttttggc
     1381 cagcacacat atagctcagg ccaaagctaa gttgcggacg aaagaaaata tatgacaacc
     1441 ggcaataggg aacatgatgc tgatcaactc agagcttaga attacgaaaa tgttgtctga
     1501 taaaactatt ctgttttcag gctatctacg ggattcgcca gcgccgcctt tattgcctgg
     1561 aaaccgatta tgacaactgt gatgagtaag acagataagc cacaaagagc gaaaacccac
     1621 caattgattt gaatgcgata agcaaagttt tctaaccatt tatttatgta tgtccatgcc
     1681 accggcgtaa caagcaccgc tgctaaagcg atcattcgta caaaatcctt tgttgcaaga
     1741 ccgatcatgt cctggactct cgcaccaagc acttttctta tgccaaattc ttttgtgcgc
     1801 tgtttaagag aaagcgcaac taaaccgaac acaccagcaa gtgaaagaac aatcgacaag
     1861 gcagaaaaat acgtgaagat ctgccggaag cgctcctcac ttttgtatat cgtattgaat
     1921 gcatcgtcaa ggaaccagta atcgaaaggg gcgccagcta cagtggtttt ccatgtttgt
     1981 cttatgtcat ttacaaaagc agatgtattg tcggttgtgt attttatagc caagtatgaa
     2041 taacggtcag cccatggttt attagttatt atcagcggct ctattttatc atgcaatgaa
     2101 gcaaaatgaa aatctttgat gacaccgatc accttatgtt ccccatttct gctgattatc
     2161 tttccgaccg gatttttcca acctaatgtt cgagcgagcg tttcatttat tacataaccg
     2221 tcgttgagtg taggcagatc ttttgaaaag aaattaccta ataccatgtt gatgttgaac
     2281 gtctttaaaa agttttcatc gacatcgagc tggtgaatga tgatggcttt cgaatcacct
     2341 tcaggaataa agccattgtt ggtaatgccg ttatatggaa tttcagaaac tgcacacaat
     2401 tctcttacag ctgcgatttg agacagtttt tgtttaagca atgggtaagc ctgccccgta
     2461 gtctcaccaa ccaaaggcaa cacaaggatg tggtctttgt caaaacccat attaatgttt
     2521 ttactgtacc gcagttgctg cgacacgaga agagtgcatg ccatcaagcc gatcgtaatt
     2581 gcaaactgaa ctacgatcaa tcctttccgg aatatgcttt gcgaactttg cggcatcagc
     2641 gctttaaata ttcttatcgc attaaatgaa gaaagataga acgccacgta actgcctgca
     2701 ataatgccta cagtcattac gattataaac aacagcaata
//
LOCUS       DASQJI010000756        14811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2723055,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000756 DASQJI010000000
VERSION     DASQJI010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 14811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14811
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2723055"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..564
                     /locus_tag="VEV83_20135"
     CDS             94..564
                     /locus_tag="VEV83_20135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47502.1"
                     /translation="MKKVFIIILSFVVITSCSRKTVPPANTHVITTPAHTDTSANIPP
                     AVNKDTLTAAPVNSNAAVLVVSDANGKIIVSEGALPPDAGVTFDYLQLSKGFTPQQKI
                     NLNTRYKTIPPRVLYVSKPYQLSSLRGVYYIYKKKFWYWKKKDGLFYLDEKYYL"
     gene            complement(634..1086)
                     /locus_tag="VEV83_20140"
     CDS             complement(634..1086)
                     /locus_tag="VEV83_20140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47503.1"
                     /translation="MKTVLLSTILSVVISFGAFANDDSIDAHLAKTLPLIFKMTDETY
                     LLNANAYYQTTVFFKGVPVTAFKSNTSNWVGFFENLSAADLPQNSQLTIARNFHGCKI
                     QQVRMYIGIDGEIDYFAELARDKKSFILKIDVNGNVKRFSCNTTHVVS"
     gene            complement(1126..1557)
                     /locus_tag="VEV83_20145"
     CDS             complement(1126..1557)
                     /locus_tag="VEV83_20145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47504.1"
                     /translation="MKKGFLAALLVVAFGSAALADGKNKMLDDLKTALKSSHAVVQTT
                     ESYKKASFVFNSKSVSAYFNAEDEELIGFSVAISSNDLPQGALENISKKYQGWTISDA
                     IMFINADGSTSYFAKVDKGSHSVALSVSDKGKLSIYAQMPH"
     gene            1803..2378
                     /locus_tag="VEV83_20150"
     CDS             1803..2378
                     /locus_tag="VEV83_20150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK47505.1"
                     /translation="MVNQDFQILYGLRGNYSERSRHEKALYQQYYYFIDEGCRKYNLN
                     YDDSFSAYSDTILSAIQNIINNNFDGRSSLKTYLYQIFSNKCIDLIRKNTTNKQQVHK
                     TMPVPEMLNQLPDAAKTIVERLMTGELKAKIKEQLNAIGEKCKEILLMFEDGVSDKEI
                     AEALAYHNAAVVKTTRLRCLEKLREKVRETS"
     gene            2467..3222
                     /locus_tag="VEV83_20155"
     CDS             2467..3222
                     /locus_tag="VEV83_20155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47506.1"
                     /translation="MNTTLEYIESYFQHTLSPDERKSFEQKCEADEEFAREVAFYVTT
                     RQSLREELLEQKHTEWKEGREAENLAAVQDIPSIAPAKRSILRSWSAYAAAACLVLAA
                     SVYLFEATPSTQKLAANYVNDNYSEISQQMGADLKDSMALGKSAYNDKQYDKAGQVFD
                     AFGKDHPDISDAKKLAGLSYLKQKNYDAALTQFDELAKMDLHINSGDFLKAVTLLERN
                     NPGDKEEAKKLLQKVIDGQEDGSDKAQEWIKKL"
     gene            3345..4763
                     /locus_tag="VEV83_20160"
     CDS             3345..4763
                     /locus_tag="VEV83_20160"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8/S53 family peptidase"
                     /protein_id="HYK47507.1"
                     /translation="MKTLHRKPKNFIGLLLVILCTFLVSACCHRKYLTKSTITSWCEY
                     PCTEIPKDTAIILWRKPGVSVQDFERWKRDHHLTNGRPACRFCNDNDLELYEGVSIEL
                     FGGTGGTSTCTVTSKDPCQPHGGGDDVVEYCYNIPIHIDRDSLTPKYQNDTIPSQGGT
                     TGSVVDLAVFDTGIDPAIKDKYTRRLAHPCYAEAALGWNFANDNSTTDDDFPSQHGSK
                     VAKFIVDQVRAYNNQRVNIIPVKIFDSQGNTSLFKILCAFSYAQHSGIKIINASFGFY
                     WHDLYNPPGLFSDYIQTHLTANGILLITSAGNRDITEDTAVINSGFVSAADVRDLGKH
                     PVYPAVLSAHYGNVLSVTTVFSPEDKISLQQNHSRTFVSVGADADETCTIRIDPPRNE
                     LCFQNPLTASGEPVHGSSFATPIVAGRIAAFYDILTAGMGTTIDQALLLSRMQTQGLV
                     KQSTGTVIPANIKHGVYAPKKL"
     gene            4912..7575
                     /locus_tag="VEV83_20165"
     CDS             4912..7575
                     /locus_tag="VEV83_20165"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing tetratricopeptide repeat
                     protein"
                     /protein_id="HYK47508.1"
                     /translation="MVLEDAGESYSVKLRQANALRAQFEKCAFEKDSVYARLLHRIGV
                     YQYNSGEINDAIENTLIAARINSSGKKNTSREFASTSYWNLGYYFFKLTIYSKSILYF
                     DSAISIGRSYPEEMEWVFRAWLKKCNAYFKKGDYEKAVSEATLGLSSVVDPKDSAQAI
                     LLLGERIQALLAESKTVKAAADIKTALALCRPDWYNMLANIYRYQGDVFATEGRADRA
                     VDYYNKAIRFRIESADSAQLAVDYNDLGYLLRTKAHNLPEAQRYFYLAYQIALELENT
                     STCALARDNLSQVSFDLGDYEEALQQSHAVLQLLAPNFKDGTITANPDYASLTNSDPR
                     NLLDLLENRVKCMLGFYKQTRNTIYLQSCVRTALLADSVITNFRHGHVEEESKLYWRD
                     ETRKFFSNALEACYLANDPDRAFFFLEKSRAVLLNDQLNEIGASKHLPPEEEAKQERF
                     LIDIVEEQQRLAALDMSSKEYVQQQTKVLQARDDFEHYIKSLDEKYPAYYQYKYADDV
                     SSLSDLQQYLAKDNQSFVHYFIGDTVSYILAIIPQSTKFVRLSQKEFSRDELIAFLQM
                     CSDKEKLNNNYPAFAAMSHSIYKSLFQKLQLPKGRVIICADNFLIPFDALCDDTKGRH
                     FLLNDYSFSYVYSARYLMKQFTNSAAVGNFLGFAPVSFATYLQMPELKDAADALHASA
                     SYYKSDKLFTGQDATRSNFFNYASSYSVVSVFSHALADTSGSEPRIFMHDSVIYLSDL
                     QRLNNPAARLVLLSACQTNIGKNATGEGVYSLARGFSSAGIPSVVATLWSADEQMIYA
                     ISEKLNEYLSKGMSKDEALQKAKLYFIQKNSGEKMLPYYWANVVLIGNTDAINLATKQ
                     NNSWWWIAGIAVAVVVAAIVFLRKKQAPKVS"
     gene            complement(7714..9231)
                     /locus_tag="VEV83_20170"
     CDS             complement(7714..9231)
                     /locus_tag="VEV83_20170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47509.1"
                     /translation="MCRYNLLFAFTLFSFGGNCQDLFYSAPIGNYAYTEYKIIGRVQH
                     KIIAYTYVWSHTFDRRNSEILIYDDKMQLDHRVSLKPIATKYSSIEFLNEGNSFSAVL
                     QYIEQNSFVCKLVSFDPEGKIVSTRILERSSILNDGPYHIVQSPNTKTFALWNLLASD
                     SNTAITIKYHLIENDTLVHSDQITLPFNRFSSGLDNTILDGRNLIVPVNDNTGSSGVL
                     YLYRVDLTNNSSSKAVRRLTDGYLVSESIRICGHDDKYSIISEWKDRDVENSKVFLWR
                     LNNDLTDVRAATVFNSPDTNNVCLEKMESFNVNIAALKDKTINLILSSRKSIPASAAG
                     RYGYSGAPASTSISSGANGLFYGDGVSYAVENVATNTNYESPDPMTAGAKIEGGTLSI
                     WNIDEQNNIRWVNCFDETIEKDFRSSVNRATIAQSENSLHIIFLKALKNNKQALGHIV
                     LQADGTYKIMPIISMNLDYLYFPRKSLQIDENTVVVPCALNGKLVFGKLKLYESW"
     gene            complement(9262..11061)
                     /gene="odhB"
                     /locus_tag="VEV83_20175"
     CDS             complement(9262..11061)
                     /gene="odhB"
                     /locus_tag="VEV83_20175"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HYK47510.1"
                     /translation="MIQIKVPAVGESISEVTLLKWLKNDGDFVNRDEVIAELESEKAT
                     FEVNAEQSGTIQIIAKEGDTLNIGAILANIDEKGRKFASATQGTKGPTLSKPQNITIE
                     EPEETKPVVQQNVTPSSSTVPVNETSNVKTEKPAASPSLKEASVEKVAQPSNDKPAAE
                     PGQTPNKDTSGKGAIEIKVPAVGESISEVTLLKWLKKDREYVERDQVIAELESEKATF
                     ELNADQSGELKIVAQEGDVLKIGDVVATINTNVGATVAGSKQQQPESVNREPPIVNKE
                     PEPSNLQPTTGNLQPAAGDQQPATGDQQPKATPVASAMIADKKVDPSQIKPSGTGGKI
                     LKHDVIEALSHPAKQAFNGQELFSRNERRERMSNLRKTISRRLVESKNTTAMLTTFNE
                     VDMGRIMEIRKQHKEAFNKAHGVNLGFMSFFAKACAIALSEWPAVNAYIDGDEIIYHD
                     YADISIAVSTPRGLTVPVMRNVESSSMADIERKVIELAGKARDSKLTTEELQGGTFTI
                     TNGGVFGSLMSTPIINLPQSAILGMHKIQERPVALNGQVVIRPMMYVALSYDHRIVDG
                     RESVSFLVRVKELLENPELLLFSKDPVKALLEI"
     gene            complement(11156..13936)
                     /locus_tag="VEV83_20180"
     CDS             complement(11156..13936)
                     /locus_tag="VEV83_20180"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HYK47511.1"
                     /translation="MKDFSYITNSHPAYIESLYQDFVKDPNSVDPEMKKFFEGFDFAI
                     SNGNGSRNGNHEVAIAQPVSQVETTPKKAEEERDWMKEIRVYRLILGYRNKGHLIADT
                     NPIRKRKDRGANLDLAFFGLSEHDLDKTFAAGNLVGLGETTLQNILNHLKACYASHVG
                     IEFKYISDQKQIDWLTNEVERKFINPLPIETTKRILEKLNQGVMFEKFLHTKYVGQKR
                     FSLEGGETTIAALDAIIHTAADHGVEEVVFGMAHRGRLNVLANIMGKTYEQIFSEFEG
                     TAKLDQTMGSGDVKYHMGYGSDIETKNGTVHLKLMPNPSHLEAVDPVVVGFSRAKADI
                     VYDSNFDKILPVLIHGDASVAGQGIVYEVIQMTDLQGYSTGGTIHFVINNQIGFTTDF
                     DDARSSDYCTSLAGAIQAPVFHVNGDDPEAVVKCVDIATRYRQGFNQDVFVDMVCYRR
                     HGHNEGDDPKYTQPQLYALIEKHPNPREVYTKYLMEHGEPDAQELAKEMEKKFWSDLQ
                     ERLDEVKQNPLPYKYQAPEEWWRSLRKATLEDFSVSPVTAISEGELNELFRGLMSWPK
                     DFQPLRKVEKLLQEKIKLFENEKKIDWATGELLAYASLLVNDNIVRMSGQDVKRGTFS
                     HRHAVLRDENTNKEYNRLDHLREKQQTFEIYNSLLSEYGVLGFEYGYALANPHALVLW
                     EAQFGDFANGAQTMIDQFIACGEQKWNRMNGIVMLLPHGYEGQGPEHSSGRIERYLQL
                     CGQLNMVVSNITTSANFFHALRRQLTWPFRKPLINFSPKAYLRYPGSYSGIDDFITGG
                     FKEVIDDARVADAGKIKKVLFCSGKLYFELAERKEKDQRNDIALIRVEQLYPLPMKQL
                     SELYKKYGKAVWFWVQEEPLNMGAASFLQMNLKNINYGVISRSASASTATGYAKVHAQ
                     EQSQIIETAFTI"
     gene            14064..14789
                     /locus_tag="VEV83_20185"
     CDS             14064..14789
                     /locus_tag="VEV83_20185"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK47512.1"
                     /translation="MKKEQVVDFYDAFVEEQSRSGINDRLYFLYKRMLQFGLKKDSRV
                     LELGCGIGAMTYLFSKTVTAGCVEAVDMSPASIRFATARIRKPNVNFHVADVVNYKPS
                     GREFDFITLFDVIEHIPIDHHDELFKNISGVCGDQTVILINIPSPGSVEYDRIHQPQL
                     LQVIDQPIELGFLNHVLVNNGLELIFFESCSIWNEGDYHFFVARKHSSFSEISLAGKR
                     NLLQKALKKIERTWIKRFYKYPQ"
BASE COUNT         4068 a         3357 c         3147 g         4239 t
ORIGIN      
        1 ccgccctgcg ataagaccgt caattcataa actcttacct tcaaattcgg ctggcgtgag
       61 gattatggca taaaattcgg ttggtgttga cagatgaaaa aagtttttat tataatactc
      121 agcttcgttg ttatcacgtc ctgcagcagg aaaacggtgc cgcctgcaaa cacacacgtc
      181 atcacgacgc ctgcgcatac ggatacaagc gcaaacattc cccctgccgt aaataaggat
      241 acgttaaccg cggcccccgt caattcgaac gctgctgtgc ttgtggtaag cgacgccaac
      301 ggcaaaataa ttgtttcgga aggcgctttg ccgccggatg caggagtgac cttcgattac
      361 cttcaactgt ctaaaggttt tacgcctcaa caaaaaatta atctaaacac ccgctataaa
      421 acgatacccc cgcgcgttct ttatgtttct aaaccatacc agcttagttc actgaggggc
      481 gtgtattata tctacaaaaa aaagttttgg tactggaaga agaaggatgg cttattttat
      541 ctggacgaaa aatattactt gtaaacaata aataaaaaag accaggctta catcgcctgg
      601 tcttttgttt caaagatttt cggttgctca accttaactt acaacatgag ttgtattgca
      661 gctaaaacgc tttacgttgc cgttaacatc aatttttaaa atgaagcttt ttttatcgcg
      721 cgccaattca gcgaaataat ctatctctcc gtcgatacct atatacatac gtacctgttg
      781 aattttacag ccatgaaagt ttcttgcgat cgttagttgt gaattttgag gcaggtcagc
      841 cgcggaaaga ttctcgaaaa agcccaccca atttgacgta ttgctcttga aagcagtaac
      901 tggaactcct ttgaaaaaaa ccgttgtctg gtaatacgcg tttgcattca acaggtacgt
      961 ttcgtcagtc attttgaaga tcagtggaag cgtttttgcc aggtgagcat cgatactgtc
     1021 atcattagcg aaagctccaa aggaaataac aacacttaaa atcgtagaaa gaagaaccgt
     1081 tttcatgatg catgattttt tgacccgtga atgcaaaccc gatgtttaat gaggcatttg
     1141 tgcgtaaata ctcaatttgc ctttgtcaga aacactaaga gcgacgctgt ggcttccttt
     1201 gtcaaccttt gcaaaataag aggtggaacc atctgcgtta atgaacataa tagcgtcaga
     1261 aattgtccat ccctggtact tttttgaaat attttccaaa gcaccctggg gcagatcatt
     1321 tgagctgata gctacactaa acccgatcaa ctcttcatct tcagcattga aataagcgct
     1381 tacacttttg ctgttgaaaa caaagctcgc cttcttgtaa gattctgtag tttgtacaac
     1441 ggcgtgtgaa cttttcaatg cggtcttaag atcatcaagc attttatttt ttccatcagc
     1501 aagtgcagct gaaccgaaag caactactaa aagagctgct aagaaacctt ttttcatttt
     1561 ttgaaatttt aataattaga aattgatttt ttgcctttcg aggtaacgga attacccggt
     1621 atgaataatg aatcgaagaa ggaattgcga tggaaacaaa acaaaaaaat tcttttgaaa
     1681 taattttagc caggcgcgcg ggtgacaata tatatacata ataagtgcgg gccgctttaa
     1741 taaaagattc gctttatctg caaatcccat tatttcattt attttagtct aaagttttcc
     1801 cattggtaaa tcaggatttc cagatactct atggtctgcg cggtaactat tcagaacgtt
     1861 cccgccacga aaaggcatta taccagcagt attattactt cattgacgaa ggttgccgga
     1921 aatataacct gaattatgac gacagcttca gcgcgtacag tgacacgatc ttatcggcga
     1981 tccagaacat aattaacaac aattttgacg gccgttcctc ccttaaaacc tacctgtacc
     2041 aaattttttc caacaaatgc attgacctta tccgaaaaaa cacgactaat aagcaacagg
     2101 tgcacaaaac aatgccggta cctgaaatgc tgaaccaatt gcccgatgcc gcaaagacga
     2161 tagttgagcg gcttatgaca ggcgaattga aggcgaagat caaagagcag ctcaatgcaa
     2221 tcggcgaaaa atgtaaagag atcttactca tgtttgaaga tggagtgagc gataaagaga
     2281 tcgcggaagc tctagcgtat cataacgccg ccgtagttaa aactacccgg ttaagatgcc
     2341 tggagaaact gcgggaaaag gtgcgggaaa catcatagcc tgggctacat ttcgattctt
     2401 cacggcagca tacatcggca gaacctagca tataatcttt aattcaaatc ttattaacta
     2461 catacaatga acactacact tgagtatatt gaatcgtatt ttcagcatac gttatccccg
     2521 gacgaaagaa aatcatttga acaaaagtgc gaagccgatg aggagtttgc ccgcgaggtc
     2581 gcattttatg taacaacccg gcagtcgtta cgggaagaat tattggaaca aaagcacact
     2641 gaatggaagg aaggcagaga agctgaaaac ctcgctgccg ttcaagatat tccgtccatt
     2701 gcccccgcaa agaggtctat cttgcggagt tggagtgctt atgctgctgc agcctgcctg
     2761 gtactcgcag cttctgtata tcttttcgaa gccacacctt ctactcaaaa gcttgcagcc
     2821 aattatgtta atgataatta ttcggaaata agccagcaga tgggtgctga tcttaaagat
     2881 agtatggccc tgggcaaatc agcctataat gataaacagt atgataaagc cggccaggtg
     2941 ttcgatgcat tcggaaaaga tcatcctgat atcagtgatg caaaaaaatt agctggtctc
     3001 tcctacctga agcaaaaaaa ttatgatgcg gcactgacac aattcgatga gctcgcgaaa
     3061 atggacctgc acattaattc gggcgatttc ctgaaggctg ttacgttgct tgaaaggaac
     3121 aatcctggtg ataaagagga agcgaagaaa ctgttacaaa aagtgatcga tggacaggaa
     3181 gacggcagcg ataaagcgca ggaatggata aaaaaacttt agagtacgga ataaatttca
     3241 taatcttatt gttgtgacta ccaaacatta ttcttgttac cactaaaaag ctgtcaaaaa
     3301 gtaaattata catccgtaaa aaatcatcac taaaaaactg ttttatgaaa acgttacatc
     3361 gcaaaccgaa aaattttatc ggtttacttc ttgtaattct gtgcactttt cttgtatctg
     3421 cctgttgcca caggaaatat ttgacaaagt caacaataac ctcatggtgt gaatatccat
     3481 gtactgaaat ccccaaagac actgctatta ttctgtggag gaaacctggt gtaagcgttc
     3541 aggatttcga acgttggaaa cgagatcatc atttgacaaa cggccgccct gcatgccgct
     3601 tttgcaatga taatgacctg gagctatacg aaggggttag catcgaattg ttcggtggca
     3661 caggtggaac ttctacgtgc actgtgactt ccaaggatcc gtgtcagccg catggaggag
     3721 gcgacgatgt agttgagtac tgctacaata ttccaataca cattgacagg gacagcctaa
     3781 ccccaaagta tcaaaacgac acaattccct ctcaaggtgg cacaaccgga tctgttgtgg
     3841 atctcgcggt tttcgacaca ggaatcgatc cggcgatcaa ggataagtat actcgccggc
     3901 tcgcgcaccc ctgctatgcg gaggccgccc ttggatggaa tttcgcaaat gataacagca
     3961 caaccgacga cgattttcca agtcagcatg gatcgaaagt cgctaaattt attgttgacc
     4021 aggtgcgggc ctataataat caaagagtga atatcatacc cgtgaagatc tttgacagcc
     4081 agggaaacac ttctttgttc aagatattgt gcgctttttc atatgcccaa catagcggta
     4141 tcaagataat aaatgcaagt ttcggattct actggcacga cctctataat ccgccgggtt
     4201 tgttctctga ttacattcaa acgcacctca cggctaacgg catattgctc ataacgtcag
     4261 ccggaaatcg cgatataact gaagacactg ctgttatcaa ttcaggtttt gtgtcagcgg
     4321 ccgatgtgcg ggatttagga aaacatccgg tttatcccgc tgtactctca gcccactacg
     4381 ggaacgtact ttcagtcact accgttttca gtcctgaaga caaaataagt ttacaacaaa
     4441 atcattcaag aacgtttgtg agcgtcggtg cggacgcaga tgaaacttgc accatcagga
     4501 tcgatccacc aagaaacgaa ctttgttttc agaatccgtt gacggcttcc ggagaaccag
     4561 ttcatggcag ctcgtttgct acccctatcg ttgccggcag aatcgctgca ttctatgata
     4621 tactaacggc aggtatgggc acaactatag atcaggcact ccttttatcg agaatgcaaa
     4681 cacagggtct ggtgaaacag agcacaggaa ctgtgatacc agcaaacata aaacatggag
     4741 tatatgctcc caaaaaactc tgatgcctgc gcaaatcgtt cgatattctt tcgggcaagg
     4801 caagtgaaaa gacgcttgcc ttgctctata ttgttttcgt taattatttg tttaggtgca
     4861 atccaaactt gcgcccaatg ttcaacgcca acagagatct ataaaaaact attggtcctg
     4921 gaagacgctg gcgagagtta tagcgttaaa ttacgtcaag ccaatgcctt acgagctcag
     4981 tttgaaaaat gcgcgtttga aaaagattcc gtctatgcgc gactacttca caggatcggc
     5041 gtgtaccagt acaattctgg agaaataaat gatgccattg aaaacacatt gatcgcagcc
     5101 cgaatcaatt cgtcgggtaa aaaaaacaca tcgcgagaat ttgcctctac aagttactgg
     5161 aacctgggat actatttttt taagctcacg atatattcaa agtcgatcct ttatttcgac
     5221 agcgctattt caattggccg ctcttatcct gaagaaatgg aatgggtctt tagagcatgg
     5281 ctcaaaaagt gcaatgctta ctttaaaaaa ggcgattatg aaaaagctgt ttcggaggct
     5341 acacttggct taagctcagt cgttgatcca aaagattcgg ctcaagctat tctgttgctg
     5401 ggtgagcgta tccaggcatt gctggctgaa tcaaaaacgg taaaagctgc ggccgatata
     5461 aagacagcac tggctttgtg cagaccggat tggtacaaca tgctcgcaaa catttatcgt
     5521 taccagggag atgtttttgc gaccgaaggt cgtgcagata gggcggttga ctattataat
     5581 aaggcgatta ggtttaggat cgagtccgcc gactcagcac aactggctgt tgattacaat
     5641 gatctcggtt acttgctccg aacaaaagcc cacaatcttc cggaggcaca gcgatatttt
     5701 tatttagcat atcagatcgc acttgaatta gaaaatacct caacatgcgc gctggcgcga
     5761 gacaaccttt cacaggtaag ttttgacctc ggagactatg aggaggcgct gcaacaatcg
     5821 catgcagtcc tgcaattact tgcgcccaat tttaaagatg gaacgataac cgcaaatcct
     5881 gactatgcga gtctaacgaa ctccgatcca agaaacctgt tggatcttct tgagaacagg
     5941 gtaaaatgca tgctgggttt ctataaacaa acacgtaaca cgatatatct gcaatcgtgc
     6001 gtaaggacag cccttcttgc tgactcggtt attaccaact tccggcatgg acacgtggaa
     6061 gaagaaagca aactttattg gcgggatgaa acgaggaaat ttttttcgaa tgcactcgaa
     6121 gcctgttacc tcgcgaatga tcccgaccgt gcatttttct ttctcgaaaa aagtcgtgcg
     6181 gtgttgctta atgatcaatt gaacgaaatt ggtgcatcaa aacacttgcc gccggaagaa
     6241 gaggcgaagc aggaacgttt cctgatcgat atcgtcgaag aacagcaacg gctcgctgca
     6301 ttagacatgt cctccaaaga atatgtgcag cagcaaacga aagttttaca ggccagggat
     6361 gatttcgaac actatatcaa gtcactcgac gaaaaatatc ctgcctatta tcaatataaa
     6421 tatgccgatg atgtttcttc tttaagcgat ttacagcagt acctggcaaa agacaatcaa
     6481 agctttgtgc actattttat tggcgatacg gtaagctaca ttcttgcaat catcccacaa
     6541 agcacaaagt tcgttcggct ttctcagaaa gaatttagtc gcgatgaatt gatcgccttc
     6601 ctgcaaatgt gctcagataa agaaaaactg aacaacaatt atcccgcttt tgcggcgatg
     6661 tcacattcga tttataagag cttgtttcaa aaattgcaac tgccaaaggg aagggttatt
     6721 atttgtgcgg ataattttct cattcctttc gatgctttgt gtgatgacac aaagggcagg
     6781 cattttcttt tgaatgatta cagcttcagc tatgtctatt ctgcgcgtta tttaatgaag
     6841 cagttcacta attctgcagc ggttggcaat ttccttggat tcgctccggt ttcctttgca
     6901 acctatcttc aaatgccaga actgaaggat gcggctgatg ctttgcacgc gtcggcatca
     6961 tattataaga gtgataaact atttaccggg caagatgcga cgcgcagcaa tttttttaat
     7021 tatgcgtctt cttattctgt ggtgagtgtt ttctcccatg cgcttgcaga caccagcggg
     7081 agtgaaccga ggatcttcat gcatgattcc gtaatttatt tgtctgacct gcagagactg
     7141 aacaacccgg cagcgcgact tgtattgctc agcgcatgcc aaaccaacat cggcaaaaat
     7201 gcaacgggcg aaggcgtgta cagtttagca aggggattct cctccgcagg tattccttcc
     7261 gttgttgcta cattgtggag cgccgatgaa caaatgatct acgcgatctc tgaaaaattg
     7321 aatgaatatc tttcaaaggg catgagcaaa gatgaagcgc tgcaaaaagc caagctctac
     7381 ttcattcaaa agaacagcgg cgaaaaaatg ttgccctatt attgggcgaa tgtggtcctc
     7441 atcggaaata ccgacgcgat caacctcgca acaaaacaaa ataattcgtg gtggtggatc
     7501 gcaggaatag ccgtggcggt ggtggttgcc gcgatagttt tcctaagaaa aaagcaggct
     7561 ccaaaagtta gttgagtatc agcttcgcga atgaaagttt atcgttgata acgcatggaa
     7621 cgatcagcac ctctgcatct atctgtaaac tctggtcgag taaatatttc gacttaagat
     7681 tcattgatat tattggttta gtttcatagg cattcaccag ctctcataaa gtttcaattt
     7741 tccaaaaaca agtttgccat tcaaagcgca agggacaacg actgtattct cgtcaatttg
     7801 caaactcttg cgtgggaaat ataaatagtc aaggttcatc gaaattatgg gcatgatctt
     7861 gtatgtgccg tcggcctgaa gcacaatatg tcctaacgct tgcttattgt tttttaaagc
     7921 ctttaaaaaa ataatgtgca gcgagttttc cgactgtgcg atcgtcgccc gattaaccga
     7981 cgatctgaaa tctttttcaa tcgtctcgtc aaaacaattt acccaccgta tgttattctg
     8041 ctcgtctata ttccaaatac taagtgtccc gccctcaatc tttgctcctg ctgtcatcgg
     8101 atccgggctc tcgtaattcg tatttgttgc aacgttctct accgcatatg aaacaccatc
     8161 gccataaaag agtccattag caccgctgct aatagaggtt gatgccggag caccggagta
     8221 accgtacctg cctgctgcag atgccggaat gcttttccgg gaagacagga taagattaat
     8281 tgtcttatct ttcaaagcag caatgtttac attaaacgat tccatttttt ccaggcacac
     8341 attattcgta tcagggctgt taaaaacagt agccgcgcgt acatcggtga gatcgttatt
     8401 caatcgccac aaaaacactt tactgttttc aacgtcccgg tctttccact ctgaaataat
     8461 tgaatacttg tcatcatgac cgcaaatcct gatgctttct gatacgaggt agccgtcggt
     8521 tagccgacga acagctttgc tcgaactgtt gttcgtaaga tcaactctat acaagtacaa
     8581 tactccggat gaaccggtgt tatcgtttac cggaacgatc aaatttctac cgtcaaggat
     8641 tgtattgtct agtccggatg aaaatctgtt gaagggtaaa gtaatttgat cggaatgcac
     8701 tagcgtgtca ttttctatca agtgatattt tatcgtaata gctgtattgc tgtctgaagc
     8761 aagtaagttc cagagcgcaa aagtttttgt atttggtgac tgtactatat ggtatggccc
     8821 atcatttaat attgatgaac gttctagtat tcgggtggat acaatctttc cttccggatc
     8881 aaaacttact aatttacaca caaacgaatt ctgctctata tattgcagca ctgcagaaaa
     8941 cgaatttcct tcattcagga attcaataga cgaatactta gtcgcaattg gtttgagcga
     9001 tacacggtgg tccaattgca ttttatcatc atagatcaat atctcggagt tgcgccggtc
     9061 aaacgtatgc gaccatacgt acgtgtaggc aataatttta tgttgtacgc gcccaatgat
     9121 cttatattcc gtatacgcgt aattaccaat aggggcacta taaaagagat cctggcagtt
     9181 gccgccaaaa gaaaaaagcg tgaaggcaaa taataggttg taccgacaca cggttgaaaa
     9241 aattattcgt tgctcgaatg ctcaaatctc cagcaatgct ttcaccggat ctttgctgaa
     9301 taataacaac tcgggatttt caagcaattc ttttacacgt accaggaagc taacgctttc
     9361 tcttccgtca acgatccggt gatcatagct aagcgcaaca tacatcattg gcctgatcac
     9421 aacctggcca ttgagtgcaa ccggtctttc ctggatcttg tgcattccaa gtattgcgct
     9481 ttgaggcaag ttgatgatcg gtgtactcat caaacttccg aatacaccac cattggtgat
     9541 cgtgaatgtg ccgccctgga gttcttcagt agttaatttg ctgtctcttg ctttaccggc
     9601 caactctatc accttccgtt caatatccgc catgctcgaa ctttccacat tgcgcattac
     9661 aggcaccgtt aagccgcgcg gcgtgcttac agcaatgctt atatccgcgt aatcatgata
     9721 aatgatctcg tcgccgtcga tgtatgcgtt aaccgcaggc cattcgctta aagcgatcgc
     9781 gcacgctttc gcaaaaaaac tcatgaaccc gaggttcacg ccatgtgcct tgttgaatgc
     9841 ctctttatgc tgtttgcgga tctccatgat gcgacccatg tccacttcat taaaagtggt
     9901 tagcatagcg gttgtattct ttgattcaac caatcgcctg ctgatcgttt tacgaagatt
     9961 gctcattcgt tccctgcgtt cattccgact gaataattcc tgtccgttga atgcctgctt
    10021 tgccggatga gataatgctt cgatcacgtc atgctttaat atcttgccac cggtaccgga
    10081 tggtttgatc tgcgacggat caactttttt atcagcgatc atggcggatg cgacgggagt
    10141 tgctttcggt tgttggtcac cagttgccgg ttgttggtca ccggctgccg gttgcaggtt
    10201 gccggttgtc ggttgcaggt tgctaggttc cggttcttta ttgacgattg gcggttcacg
    10261 attgacggat tcaggctgtt gctgtttact gccagctaca gttgcgccaa catttgtatt
    10321 gatcgttgcc accacatcgc cgatcttcaa tacgtcacct tcctgtgcga ctatttttaa
    10381 ttcgcccgat tgatcagcgt ttaattcaaa agtcgctttt tcactttcga gttccgcgat
    10441 cacctggtcg cgttcaacat attcccgatc ttttttcaac cacttcaaca acgttacttc
    10501 actaattgat tcgccaactg ccgggacttt tatttcaatt gctcctttgc cggaagtatc
    10561 cttatttgga gtttgtcccg gttctgcggc aggtttatca ttggaaggct gcgcgacttt
    10621 ttcgactgat gcttccttta gcgacggcga tgcagccggc ttttcagttt tgacatttga
    10681 cgtttcattc accggaacag tcgaactcga tggcgtgaca ttctgctgca cgactggttt
    10741 tgtctcttca ggttcttcaa tagtaatgtt ctgaggcttg cttaacgttg gaccttttgt
    10801 gccttgcgtt gcagatgcga acttccgccc tttctcatca atatttgcca gtatggcgcc
    10861 aatgtttaac gtgtcgcctt cttttgcaat gatctgtatt gtaccgcttt gttccgcatt
    10921 tacttcaaag gttgcttttt cgctttcgag ttcggcgatc acttcgtcac ggttcacgaa
    10981 gtcgccgtca tttttaagcc attttaataa agtcacttca cttatggact ctcctactgc
    11041 gggaactttt atttggatca tatatccctc catcttccgc cggcggcgaa agcgtttatt
    11101 attgatttag ataacctcaa agatattagt cattcgaata agtctttcac agcggttaaa
    11161 tcgtgaacgc cgtttcaatt atctgcgact gttcttgcgc atgcactttc gcgtaaccgg
    11221 tagctgtgga cgcgctcgcg cttctgctga tcacgccgta attgatattt ttcaaattca
    11281 tttgcagaaa tgatgccgcg cccatattca agggttcttc ctgcacccaa aaccacacag
    11341 ccttaccata ttttttatac agttcgctca attgtttcat tggcaaagga tataattgtt
    11401 caacgcggat caatgcgatg tcgttgcgtt gatctttttc ttttctttcc gcaagttcga
    11461 aatagagctt gcctgaacaa aacaatacct ttttgatctt gccagcatca gcaacacgtg
    11521 catcatcgat cacctctttg aaacctccgg tgataaaatc gtcgatacca ctataacttc
    11581 ccgggtagcg caaataggct ttaggcgaaa aatttatcaa cggtttgcgg aacggccacg
    11641 ttaactggcg ccgcaaagca tgaaagaagt ttgccgatgt ggttatattt gacacaacca
    11701 tattcaattg cccgcatagc tgaagatacc tttcgatacg cccactgcta tgctcaggac
    11761 cctggccttc gtacccatgc ggcaaaagca ttacaatgcc attcatacga ttccattttt
    11821 gctcgccgca ggcaatgaac tggtcgatca tagtctgcgc gccgttcgca aaatccccaa
    11881 actgggcttc ccacaacact aatgcgtgtg gattggcaag cgcatatcca tactcgaaac
    11941 caagtacacc atattcgctc agcaacgaat tatatatttc aaacgtctgc tgcttctcgc
    12001 gtaaatgatc gagtcggttg tactccttgt ttgtattttc atcacgaagc acagcatgcc
    12061 tgtgactaaa agttccccgc ttcacatcct gcccgctcat tcttacgatg ttgtcattta
    12121 caagcaacga tgcataagcc aacagctcgc ctgtagccca gtcgatcttt ttttcattct
    12181 caaacaattt tatcttctcc tgcaatagtt tttcaacttt gcgcagtggt tgaaaatcct
    12241 ttggccagct catcaaacct ctgaataact cgttcagttc tccttcacta attgccgtta
    12301 cgggtgaaac actgaaatct tctaacgttg cctttctcag gctgcgccac cactcttcag
    12361 gtgcctggta tttataaggc aacggatttt gttttacctc gtctaaccgc tcctgcagat
    12421 cagaccagaa ttttttctcc atttccttcg cgagttcctg ggcatcgggc tctccatgct
    12481 ccatcaaata tttcgtgtag acctcgcgcg gatttggatg cttttcgatg agtgcataca
    12541 actggggttg agtatatttc ggatcatcgc cttcattgtg gccgtgccgg cgatagcaaa
    12601 ccatgtccac aaaaacgtcc tggttgaatc cctggcgata acgtgttgca atgtcaacac
    12661 atttaaccac cgcttccggg tcatctccat tcacgtgaaa cacgggcgcc tggatggcgc
    12721 cggccaggga agtgcaatag tctgagctgc gcgcatcgtc aaagtccgtg gtaaaaccaa
    12781 tttgattgtt gatgacgaaa tgaattgtgc cgccggttga ataaccctgc agatcggtca
    12841 tctgtattac ttcatacaca atgccctgcc ccgcaaccga tgcatcgcca tgaataagca
    12901 ccggtaatat tttatcgaaa ttgctgtcat aaacgatatc ggcttttgcc cgagaaaatc
    12961 caacaacgac agggtccact gcttcgaggt gcgacgggtt aggcattaat tttaaatgta
    13021 cagttccgtt ttttgtttcg atatcgctgc catagcccat gtgatatttt acatcgccgc
    13081 tgcccattgt ttgatccagt ttcgcagtac cctcgaactc gctgaagatc tgttcataag
    13141 tttttcccat gatgttcgcg agcacgttca accttccgcg atgagccatg ccgaaaacaa
    13201 cttcttccac gccatgatcg gcagccgtat gaatgatcgc gtcgagcgcc gcaatcgtgg
    13261 tctcaccacc ttccagcgaa aatctttttt gcccgacata ttttgtgtga aggaattttt
    13321 cgaacatcac accctggttg agcttttcga gtatgcgctt cgttgtttcg atgggcagcg
    13381 gattgataaa ttttcgttcg acctcatttg tcagccagtc aatttgtttc tggtcgctta
    13441 tatatttaaa ctcgatgcca acgtgagaag catagcaggc cttgaggtga ttaagaatat
    13501 tctgcaatgt cgtttcaccc agtcctacca ggttgcccgc ggcgaatgtt ttgtccaggt
    13561 catgttcact caacccaaaa aaagccaggt cgagattagc gccgcggtct tttcttttac
    13621 gaatggggtt tgtgtctgcg atcaaatggc ctttgttcct gtaaccaaga atgagtcgat
    13681 acactcgtat ctccttcatc cagtcgcgtt cctcttccgc ctttttcggt gttgtttcca
    13741 cctgcgagac aggttgcgca attgctacct cgtggttgcc gttccggctg ccgttgccat
    13801 tcgatatcgc aaaatcaaag ccttcaaaaa atttcttcat ttccgggtct acactgttcg
    13861 gatctttcac aaaatcctgg tacagacttt caatatatgc cggatgagaa tttgttatgt
    13921 atgagaaatc tttcatggaa gcaagttatt tataaatgat ccgccgatat tgctacaaat
    13981 atcggttttg cggtacaaac ttaccaaata gctccccggt ttccggtatg gcgacaataa
    14041 aaatgtactc ctatcttaga gcagtgaaaa aggaacaggt cgttgacttt tatgatgcct
    14101 ttgttgaaga gcaaagcagg tcgggcatta acgaccggct atatttcttg tataagagaa
    14161 tgttgcagtt tggcttgaaa aaagactcgc gggtgctgga gctcgggtgt ggcatcggcg
    14221 cgatgaccta tcttttttca aaaacagtga ccgcgggatg tgttgaggcg gtcgatatga
    14281 gccccgcatc gatccggttt gcaacagcca ggattcgcaa gccaaatgtt aatttccatg
    14341 ttgctgacgt tgtgaattat aagccctctg ggcgtgagtt tgattttatc acgttgtttg
    14401 atgtgattga acacattcca attgaccacc atgacgagct attcaaaaat attagtggtg
    14461 tgtgcggtga ccaaacggtt attctcatca acataccaag cccgggctca gtagaatatg
    14521 accggataca ccagccgcag ttgttacagg tgatcgatca gccgatcgaa cttggatttc
    14581 tgaatcatgt gctggttaac aacggattgg aactaatatt ttttgaaagc tgcagtatct
    14641 ggaatgaagg cgactatcat ttttttgtag cgcgtaagca ttcatcattc agcgagataa
    14701 gtcttgccgg gaaacgcaac ttgttacaaa aagcgttaaa aaaaatcgaa agaacatgga
    14761 taaaacggtt ttacaagtat ccgcagtgag aatagttcaa ttaaattttt c
//
LOCUS       DASQJI010000757         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_266400,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000757 DASQJI010000000
VERSION     DASQJI010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266400"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VEV83_20190"
     CDS             <1..612
                     /locus_tag="VEV83_20190"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HYK47513.1"
                     /translation="YPGKVKPNIASVGSGTTLYAPSGVTSGSGTSFSNPNINGLIACL
                     WQAFPEFNNMTILNAVYQNSDRYSTPDNRYGFGIPDMKKAFRALKALRNQRQYGTEWL
                     FVKNADFITSLEAKLVGRLDGDAELSLLNADKKVVATMEIKTEEQEVYDLSFPGLDNL
                     PAGVYTLQYTDGKTVKTITVTKQTVLSNKNLLRPPVIVKQAAQ"
     gene            complement(593..>1547)
                     /locus_tag="VEV83_20195"
     CDS             complement(593..>1547)
                     /locus_tag="VEV83_20195"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYK47514.1"
                     /translation="KHWSNSLGERISFVKSTHSSFSLEDVFRFTTELSDGIDTTSFVQ
                     SHLLQPDVFLRIRPHCREQVIQTLQQNAIAFTLEADDCIRLPPTVNVENSLKLDKEVV
                     VQDASSQQIKKYLEPVRSPILNPQSEIPNPLSVWDCCAGSGGKSILSYDTFPNIELTA
                     TDIRPSIIHNLRKRFQNAGINHYRANVIDITNTVGNVPALKIAKGFDLIICDAPCTGS
                     GTWSRTPEQLFFFTENKIDDYATLQRSIVSNAIPLLKGGGYFLYITCSVFKKENEEII
                     AFIKSKFHLQLVKMELLKGYTKKADSMFAGLFSSDTIAQPA"
BASE COUNT          440 a          320 c          359 g          428 t
ORIGIN      
        1 tacccgggta aagtgaagcc gaacattgcg tcagttggct caggcactac attatatgct
       61 ccttctggcg taacgagcgg cagcggtacg tcgttctcga atccgaatat caatggcctc
      121 atcgcatgcc tttggcaagc gttccctgaa tttaataata tgacgatcct caacgctgtt
      181 tatcaaaatt cagacaggta cagtactcct gataaccgtt atggttttgg gatcccggat
      241 atgaaaaaag cgttcagggc cttaaaggca ttaagaaatc aaaggcaata tggcactgaa
      301 tggctgtttg ttaaaaacgc agattttatc actagcctcg aagcgaaact tgtcggccgg
      361 ttggatggtg atgcagaact gagtttactt aatgcggaca agaaagttgt cgcaacaatg
      421 gagatcaaaa ctgaagagca ggaagtctat gatctttctt ttccgggcct cgacaattta
      481 ccagcaggcg tttatacgct gcagtacacc gatggtaaaa ctgtaaaaac aataacggtt
      541 accaaacaaa ccgtgctcag taataaaaat ttgctcaggc caccggtgat cgttaagcag
      601 gctgcgcaat agtgtcagaa ctgaataagc ccgcaaacat actatcagct tttttggtat
      661 agcctttaag caattccatc tttaccagtt gaaggtggaa tttgcttttt ataaatgcaa
      721 tgatctcctc gttttctttt ttgaacactg aacacgtgat gtacaaaaaa tatccgccgc
      781 cttttagcaa tggaatcgca ttcgatacaa tgcttcgctg cagggtagcg tagtcatcaa
      841 ttttgttttc cgtgaaaaaa aataattgtt caggcgttct gctccaggtg ccgctgccgg
      901 tgcaaggcgc atcgcaaatg atgagatcaa aacctttcgc aatctttaag gcaggaacgt
      961 tgccaacagt gtttgtaata tcaatcacgt tggctctata gtggttgatc cccgcgtttt
     1021 gaaaacgttt cctgagatta tgaatgatgg aagggcgaat atctgttgca gtgagctcga
     1081 tgtttggaaa cgtgtcgtaa gataatatcg attttccgcc gcttccggcg caacaatccc
     1141 aaacggaaag cggatttgga atttcggatt gaggatttag gattggggat cgaactggct
     1201 ccaggtattt ttttatttgt tgagatgatg cgtcctgtac tacgacctct ttatcaagtt
     1261 ttaaagaatt ttctacatta acggtgggag gcagacggat gcaatcatcg gcttcgaggg
     1321 taaacgcaat agcgttttgc tgcagcgttt gaatcacttg ctcacgacaa tgcgggcgga
     1381 tacgtaaaaa aacatcaggc tgcagcaaat gtgattgaac aaagcttgtt gtgtcaatac
     1441 cgtcactcag ttcggttgta aaacgaaaaa catcctccag agaaaaagag ctatgcgttg
     1501 atttcacgaa gctgatacgc tcaccaaggg agttgctcca gtgcttc
//
LOCUS       DASQJI010000758         3566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3029608,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000758 DASQJI010000000
VERSION     DASQJI010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3566
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3029608"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(493..891)
                     /locus_tag="VEV83_20200"
     CDS             complement(493..891)
                     /locus_tag="VEV83_20200"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47515.1"
                     /translation="MEKQLDCVLLIDDNDDDNFYHRIILSESGVSKRIQVAETGYDAL
                     NFLQQMQQAPELIFLDINMPRMNGWEFLERYRKLELQQKKDVVIIMLTTSLNPADEKK
                     ARSMPEISGFESKPLTLDMLKNILRKHFGE"
     gene            complement(895..2421)
                     /locus_tag="VEV83_20205"
     CDS             complement(895..2421)
                     /locus_tag="VEV83_20205"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47516.1"
                     /translation="MRNFFPWKRLRDISIKKKLYFIVGTMAVLIAIELITLWFAIHTL
                     SSVRAFVGAEGLWSKAEKDAVYHLRKYNRTHSEADYVAFQNFMAVPLGDHKTRLELLK
                     AHPDMDVARKGFLEGRINGDDIDGMIGLVMRFHNISYISKAIAYWTEGDSIIAQLIPI
                     GEQLHSEINSPTPSRERIDSLTALIDPINQRLTSLEDNFSYVLGEGSRWLENLILKIV
                     FSVALTVEITGLVLSISVTRGITKGLNEINRVADIIAKGDLTERVTVFSKDEIGQVAA
                     AMNNMTDQLVLSNKELSQFAYIASHDLQEPLRTISNYADLFQTQYKGKLDEHADKYLN
                     VISAATKRMQLLIKDLLDYSGIGYDKQLDTIDCKKMLAEVLGDMETCIRETRAKINVD
                     RLPVVRGYAELRLVFQNLISNAIKFKKPECDPVVDIRAASKNNEWLFSVHDNGIGIEP
                     EYFERIFTIFQKLHSRKEYPGSGIGLAHCKKIIGMHGGRIWVESEPGRGTTFYFTIPT
                     "
     gene            2620..2793
                     /locus_tag="VEV83_20210"
     CDS             2620..2793
                     /locus_tag="VEV83_20210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47517.1"
                     /translation="MGQRFELHNCCRPIAVNALSESFKVNAAFKAVVMPNPNTGDFVM
                     QLQLPKDKATDIN"
BASE COUNT          959 a          762 c          750 g         1095 t
ORIGIN      
        1 accattgatg ccgaaggcga acctggcaaa ggcgcaacgt tcaatattta tttaccggtg
       61 gaacggtgag gaattggatt gcagattggc gattgcacat ttcagattta caatttacga
      121 tctacaattt acaattttga ctgtcgtgcc cgaacgtaag gatagataaa ttgcagaatc
      181 acattgatct ggcatctctt gattaggaga tttacaattg tagattggcg attgcagatt
      241 tcagatttac gatttacgat ttacgattgc aaattggcga ttacagatgg cggatttagg
      301 atttgtgatt tctcgtttcc tatttttggg ttttattttt tcggttgttg gtccttgttt
      361 tatctctttg ggtttgtttt tttggttctt ggttcttgtt ctttggttct tgttctttgg
      421 ttcttgttct ttgattctta ttcttatttc ctatttccta tttcctattt cttatttctt
      481 ggttctttcc ccttactcac cgaaatgttt acgcaaaatg ttcttcaaca tatcaagagt
      541 taaaggcttc gactcaaagc cgctgatctc aggcattgac cgggcctttt tttcatccgc
      601 agggttgagg gaagtagtaa gcattatgat aacaacatcc ttcttttgtt gcaactctaa
      661 cttcctgtaa cgttccagga actcccagcc gttcattcgc ggcatattga tgtccagaaa
      721 gatcaattcc ggagcttgct gcatttgctg taaaaaattc agtgcgtcat aaccggtttc
      781 ggccacttgt atgcgcttgc tgacacccga ctcagagagt atgatgcgat gataaaaatt
      841 gtcatcgtca ttatcgtcga tcagcaacac acaatccagt tgtttctcca tgagctaagt
      901 tggaatcgta aaataaaaag tggttcctct tcccggctca gattctaccc atatcctgcc
      961 gccgtgcatc cctatgatct ttttgcagtg ggcgaggccg atcccgctgc ccgggtattc
     1021 ttttcgtgaa tgcagttttt ggaagatcgt aaagatgcgc tcaaaatatt ctggttctat
     1081 cccgatgcca ttatcgtgaa cactaaaaag ccattcatta ttttttgacg ctgccctgat
     1141 gtcaacgaca ggatcacact ccggtttttt aaatttaata gcgttgctga tgagattctg
     1201 aaagacaagg cgcagttcgg cgtaccccct tacaacaggc aatcgatcca cattaatttt
     1261 tgcgcgtgtc tccctgatgc aggtttccat gtcgcccaga acttcggcca acattttttt
     1321 gcaatcgatc gtatccagtt gtttgtcgta cccgatgccg gaataatcga gcaggtcttt
     1381 aatcaggagt tgcatacgtt tcgtggccgc ggaaataaca ttcaggtatt tatctgcatg
     1441 ctcatctaat tttcctttgt attgtgtttg aaataagtca gcataattac tgatcgttct
     1501 taacggttcc tgcagatcgt gcgaagctat atacgcgaat tgactaagtt ccttattgga
     1561 cagcactaac tggtcggtca tattgttcat agctgcagcc acctggccga tctcgtcttt
     1621 tgaaaaaaca gttacgcgtt cggtaagatc tcctttcgca atgatgtccg cgacccggtt
     1681 tatttcattg aggcctttcg taatgcctct cgttacggat atacttagca ccagccctgt
     1741 tatttcaacc gtcaatgcca cggaaaacac aattttcagg atgaggtttt cgagccagcg
     1801 cgagccttct cccagcacat acgaaaaatt gtcctcgaga ctggtaagtc gttgattgat
     1861 cggatctatc agcgctgtga gcgaatctat tctttccctt gacggagtag gggaatttat
     1921 ctctgaatgt aattgttcac cgataggaat taattgggct atgatagaat ccccttccgt
     1981 ccaatacgcg atcgctttgc tgatataaga aatgttatga aatctcatca ccagcccgat
     2041 cattccatcg atgtcatcgc cgttaatacg cccctccaaa aatcctttcc ttgccacgtc
     2101 catgtcagga tgcgctttta ataattcaag ccgtgtttta tgatcgccta gcggtacggc
     2161 catgaaattt tgaaaggcaa cataatctgc ttcgctgtgt gtgcggttgt atttccgcag
     2221 atgatacaca gcatcctttt ccgcttttga ccataggccc tctgctccca caaacgccct
     2281 caccgaagaa agtgtatgta tggcgaacca gagtgttatc agttcaatgg caataagcac
     2341 tgccatggtc cctacaatga aatacagttt ctttttgatg gagatgtccc gtaaacgttt
     2401 ccacggaaag aagtttctca tattagcgat tcgcaattag ttttatcgag ttcgaataga
     2461 ttaacaggtg ccttgcaata aaattaaagg aataattgag cacccgcgtt catgcggcca
     2521 ttttattttt cacttggctg cagcagggtg ttgaaaaacc tgtttataaa aataacatga
     2581 atgcaagatt agaagtttgt gtaccggtaa cacttctgat tgggccaaag gtttgaactt
     2641 cacaactgct gccggccaat tgccgtcaat gcgctatctg aatcgtttaa agtaaatgca
     2701 gcgttcaagg cagttgtaat gccgaatcca aacacaggtg attttgtgat gcaactacaa
     2761 ctgccaaagg ataaagcaac cgacatcaat tgaattattc aattcgctgc gtcaaaaggt
     2821 ttggcactct gatctcagaa cagggagcgg gaacggtgcg caagaatgtg tacctccaaa
     2881 caaaattgac gtccggtatt tatatgttgg tcatccaaag gagtgatgga cattatacca
     2941 cgaagattgt ggtaaacaaa taatctgcac gattatactt aaatgtaaaa gaccgctttg
     3001 caagaggcgg tttttttatt aagcaaaaga tcttgtcgcc catttctaag tcaaaataaa
     3061 atgtcgcata aacctaacag gtttttgtga ataagcgggc tgagaaatat aaggagtcag
     3121 acctgtcagg ttttgattga cacaacggta gagacctctc ctacgatcga agtgacggcg
     3181 cgacacttcc aaatatagag acctttgtcc tgcacatcgg gatcgcaggt gacgttgtga
     3241 gagcttccct tttaagcaaa tgacggcgaa ttacttcatg ctcttgttgt ggaatcggta
     3301 tttacgtgcg caacggaatc gcggataagt atgtgcaaaa aaaagccgct taatgtggga
     3361 aattatacct cataagcggc gtgttggttg cggacaccgg attttaaaca tcaaagttat
     3421 ctttgaaaat cagcgcgaag atagcgaata ttcgttcatg caagcaggca gctgtttagt
     3481 ttcgaaatcg caaatgccaa aaaacaagat ccgaaaattt caaacaacaa gttccaaaaa
     3541 acaagatcca aaaaaataaa aatttg
//
LOCUS       DASQJI010000759        11673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_111249,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000759 DASQJI010000000
VERSION     DASQJI010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11673
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111249"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1405
                     /locus_tag="VEV83_20215"
     CDS             <1..1405
                     /locus_tag="VEV83_20215"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK47518.1"
                     /translation="NNTANGSYALTYNTIGTENTANGAFALNRNTTGVYNTANGSNAL
                     YFNTTGYYNTGNGYQSLYSNTTGYNNTANGENALYFNTTGFVNTANGGSSLYSNTSGY
                     ANTANGSSTLFSNTTGSGNTANGGNALFANTTGWSNTAIGFYALYNNITGSNNTAVGP
                     FADVSPGNLTYATAIGSDAIVDASNKVRVGHTAVTSIGGQVGWSTFSDGRYKKNIKED
                     VKGLSFINKLRPITYTVDINGLNEYYNKGRKHDSTYEKMKTSMQPSTDEAAKIVYNGF
                     IAQDVEAAAKKLNYEFSGVDKPKTKDGLYGLRYADFVVPLVKAVQELSSQNENLLADQ
                     VRLKSQNDKQQEINESLQKQIDELRAMRIPVDKSDVGFTSNLKPQTSNFSLEQNIPNP
                     FNNSTLISYTLSESFSSAQIIVTDKSGKLIKQVPVSATGKGSLRIDASSLPSATYQYS
                     LLVDGKLIDTKQMILTK"
     gene            1554..3578
                     /locus_tag="VEV83_20220"
     CDS             1554..3578
                     /locus_tag="VEV83_20220"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK47519.1"
                     /translation="MNLSTKILLVLFAQIFFFSKHLESQTNSFPSSGSAGIGTTTPNA
                     SSALEIKSTTQGLLLSRMTKAQRDAIITPATGLMIYQTNSTPGFYYYSGTAWTAITQK
                     PKGWSVTGNGGTVAGTNFIGTTDAQPLLFKVYNQRSGLIEHDAATANTSFGYLSLFSN
                     TSANNTAFGYYALYSNSTGQANVANGAYALLFNTSDYNVATGFKALYSNTGGYANTAT
                     GFQTLLSNTDGILNTGTGSEALLSNTTGSYNTGTGYQSLFSNTTGADNTATGLDALHY
                     NTTGSYNTSTGRDALRNNTTGYANTATGWHAIFSNTTGYWNTAEGNEALYSNTSGASN
                     TACGYQSLFLNTSGFYNTAIGRFALYANTTNHYNTAIGYRALETNTTGSTNSALGAYA
                     DVSSGTLTNATAIGYFAHVDASDKIRLGNTSITSIGGQVGWTTFSDGRYKKNIKENVV
                     GLSFIKSLRPITYTVDINGLNDYYNKKRSLKEKEEPGETEQQSEESAGKMVFNGFIAQ
                     EVDEAARKLNYEFSGVDKPQTKDGIYGLRYDNFVVPLVKAVQELSAKNDDLQKQIDDL
                     KAVISAGNQNLTSAQSSKITSVNSSLEQNVPNPFSNYTVINYTLPETVVSAQIIIADQ
                     SGKVLKQVQVQGARKGSLRIDAPGLSSGTYQYSLLVNGNVTSTRQMVLTK"
     gene            3670..6723
                     /locus_tag="VEV83_20225"
     CDS             3670..6723
                     /locus_tag="VEV83_20225"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HYK47520.1"
                     /translation="MQRQLTSKPLPVLHALKHNTVLCMLMCFVLSASVISAQDTFLGL
                     TSNGGPEGRGTAFSIRSTGANFAVTKGFADWGKTPNGDLIQGSDGDFYGMTYTGGTYT
                     YGSIFKMTLAGVITILHQFNYAADGANPYGELTKGTDGNFYGMTSSGGTNSYGTIFKI
                     TPGGVFTVLKQLVSADGTNPRGHLVLAPDGNFYGASYAGGAFGSGTIFKVTAAGALTV
                     LHSLSSATDGANCYGSLVRGTDGLFYGTTNGGGSSGMGTIFKITSAGAYTVLHTMLTA
                     DGVHSQSDLIQATDGDFYGVAYGGGASGGGTVFKITAAGSFTVLKNLTAATDGQAPYG
                     GLVQGIDGLLYGMNSGGGAHSNGTVFKMTTTGTLTPLRSLTTVTDGGSPRGNLIQATD
                     GNFYGMTSTGGNSAFGTAFKISATGTFTLLNGFNGSVGGNTPFESLTQSIKDNAYYGT
                     TNSGGVYNYGTVFKLCGGVHTVIHSFNNTVDGGSPQGSLVQGTDSNFYGMTYSGGTNG
                     SGTIFKITATGTYTVLKNLLSSTDGGLPKGSLVLGTDGIFYGMTNTGGTNGGGTIFKI
                     TSAGAFNVLRSLLSSTDGANPEGNLIQGADGNFYGMTSSPARVFKITPAGVFTPLHTF
                     SGNDGGLPLGSLLLAADGNFYGTASNGGLNAGGTIFKMTTAGIYTVLRPLTSAADGSA
                     PKGNLLQGTDGNLYGMTSAGGTYAAGTLFKITTGGTYTVLRHFNLLADGGIAFGSLIR
                     TVNNLIADPQTITTTEDVSKKITLTGSGGSPLVFTVTTKPKHGSVSGNGSAKTYKPKA
                     NYEGKDSFAFTVSVGCLSSPPAIIKITITAVPDTPKLAPIGDKSVVKNTTLTFTAKAT
                     DPDKGESLTFSLIGAPAGASIGTTSGIFTWMPTTSGSFIFKVRVTDNSALALYDEEQI
                     TVTVTNATPQNNAVSSQIVAGKFIDATLSPNPVVNKLVVILNVPVDEVSATITDLKGV
                     VPIKPQFTISGIQKFEIDASTLKPGIYFLRLETKDGNKTYRFIKQ"
     gene            complement(6931..7446)
                     /locus_tag="VEV83_20230"
     CDS             complement(6931..7446)
                     /locus_tag="VEV83_20230"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HYK47521.1"
                     /translation="MKLPPAFVKDTDNIHVIIETPKGSGNKYAFDPKTQLFKLTKILP
                     EGLVFPLHFGFIPCTKGEDGDPLDALVLMDEPSYPGNLIECKVLGIIEAKQTEKNGDS
                     MRNDRLITAAIESQRYGALTSLKNLDKYLVDEIINFFITYNEMGKKKFQPLGNKGPQK
                     ATNLIKNHLMK"
     gene            7871..8293
                     /locus_tag="VEV83_20235"
     CDS             7871..8293
                     /locus_tag="VEV83_20235"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47522.1"
                     /translation="MKLDPIIIIDDDEEDCELLKIGFQHLDIKNQLIVFNSSRDALTY
                     LQSFNGQVFFILCDINMPVMDGITLRRKINENEALRFKSIPFLFLSTSGSEQVVNNAY
                     SLNIQGYFKKPNSVKEIQQILSRIISYWDTSYRPSITQ"
     gene            complement(8893..9465)
                     /locus_tag="VEV83_20240"
     CDS             complement(8893..9465)
                     /locus_tag="VEV83_20240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HYK47523.1"
                     /translation="MATSNKKSSTRKSNNSNYKAGIASEDSMLKEFFIDELKDIYWAE
                     KHIVTTLPKMQKAATSEELKNAFETHTQQSQEHVARLEQAFELLGEKAQAKKCDAMAG
                     IIEEGKGIIEETEKGTATRDVGLILSAQKVEHYEISTYGGLAQLATTLGLTEVADILA
                     QTLAEEKETDELLTQLAESGINYQAAEEVE"
     gene            complement(9594..10223)
                     /locus_tag="VEV83_20245"
     CDS             complement(9594..10223)
                     /locus_tag="VEV83_20245"
                     /inference="COORDINATES: protein motif:HMM:NF025119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HYK47524.1"
                     /translation="MQITYYTDPLCCWSWAFEPEWQKLKLALGERLKYRYCMGGLLPS
                     WKNYHDVFNSVSRPVQMGPVWMHAAEVTGIKIQNDIWVKDPPASSYPACFAFKCAESQ
                     SADAGEKYLQFLRSACMLESKNIAKKDVLFELAFELAKDKKIKFNYTQFERDMANNRS
                     LDALRKDLNETASFHITRFPTLVIKTQAGNAKLITGYSKYERLGRVITS"
     gene            complement(10252..11298)
                     /locus_tag="VEV83_20250"
     CDS             complement(10252..11298)
                     /locus_tag="VEV83_20250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HYK47525.1"
                     /translation="MFYHVKELQFNARVSKPDPAFATLLLEQFGGANGELAAALRYFA
                     QAFGAKNPYPDKYDLLMDIATEEFSHLEIVGATIQMLLTGINGDLKNAADNAEIMQLL
                     NGKAAKEDMIHKGMIAPQFLVGSAGTPCYTNSQGVPWTAAYINGDGQGDLTSDLRSDV
                     AAETRAKLVYEYLLQFTDDPYVKETLRFLMTREVAHFQMFEAALETIQPNFPPGILQS
                     DPRYSNLYFNMSTGNDFRGDWNEGQSSRLNETFQFIEDPVAHVMQTNGLLNQEATGTD
                     RDENSVQKANKALSELRSEEINMASPINKAQQWTDSFSGNGNENGSSTKQKTILKTKT
                     KASSASAKKSGKKR"
BASE COUNT         3440 a         2528 c         2405 g         3300 t
ORIGIN      
        1 taacaacacc gccaatggaa gttatgcgct tacttataac accatcggaa ctgagaacac
       61 agcaaacggg gcttttgctc tcaatagaaa taccacgggg gtttataaca ctgccaatgg
      121 cagtaatgcg ctttacttca acacgaccgg atattacaac acggggaatg ggtatcagtc
      181 tctttattct aacacgaccg ggtataacaa cacggccaat ggagagaatg ctctttattt
      241 caacactacc ggcttcgtga acacggcgaa tggcggcagt tcgctttata gtaataccag
      301 cggatacgcc aacacagcga atggatcctc tacgcttttt tccaacacca ccggttcggg
      361 gaacaccgcg aatggcggca atgccctttt tgcaaatacc accggctggt cgaacaccgc
      421 gattggcttt tatgcgcttt acaacaacat tacagggagt aacaacacgg ctgtaggtcc
      481 ttttgctgac gtatcaccag ggaatctaac ctatgccacc gcaattggaa gtgatgcgat
      541 agttgatgcg agcaacaaag tgcgggttgg gcacaccgcc gtaacatcta tcggcgggca
      601 ggtgggctgg agcactttca gtgatggcag gtataaaaaa aatataaaag aagatgtaaa
      661 aggcctttcg tttatcaaca agctgcgacc cataacttat acggttgata taaacggttt
      721 aaatgagtat tacaacaaag gaagaaagca tgacagtact tatgaaaaga tgaagacaag
      781 tatgcagcca tcaacagatg aggctgctaa aattgtatac aatggtttca tcgcgcagga
      841 tgtggaagct gctgcaaaaa aattgaacta tgaatttagc ggcgtggaca aaccaaaaac
      901 aaaagatggt ttatatggtt tgcgctatgc agattttgta gtacccctgg tgaaagcggt
      961 ccaggagttg tcaagtcaaa atgaaaacct tctcgccgac caggtaagat taaaaagcca
     1021 aaatgacaag caacaagaaa taaatgaaag cctgcaaaaa caaattgacg agttgagagc
     1081 aatgagaatt ccggtcgata aaagcgatgt cggctttaca tcaaacctca aacctcaaac
     1141 ctcaaacttt tctcttgaac aaaacatccc aaatccattt aataattcaa cactgatcag
     1201 ttatacttta tcggaaagct tttcatcagc acaaattatt gtaaccgata aatcaggaaa
     1261 acttataaaa caagttccgg tttcagccac aggcaaaggc tctttgcgga ttgatgcttc
     1321 ctctctgcct tcagcaactt accaatattc attattggtt gatggaaaat tgattgatac
     1381 caaacaaatg attctgacga aatgaaaaca aatgattaca ttacaagatt gtccctcaca
     1441 agcgctctgg atcaacccgc gatgcagagc gggaagttag ataacctgcg atattctgct
     1501 tttaagccga tgcctttgac caaaataatt tttagcaaac aaaatgtatt gttatgaacc
     1561 tctctacaaa aattctgctg gtattattcg cgcaaatctt ttttttcagc aagcaccttg
     1621 agtcgcaaac aaactcattt ccctcaagcg gcagcgcagg tattggcact actactccga
     1681 atgcttcatc tgcattagaa attaaatcaa ctacacaagg attgctgtta tcacgaatga
     1741 caaaagcaca acgggacgca attataacac cggctacagg gttaatgatc tatcaaacaa
     1801 attctacacc cggtttttat tattacagcg gcacagcatg gacggcgata acacaaaaac
     1861 caaagggctg gtctgttacc ggcaatggcg gcactgtagc aggtaccaat ttcattggca
     1921 ctacagatgc gcagccgttg ctttttaaag tatacaatca aagatcaggc ttgatagaac
     1981 acgacgcagc aactgcgaac acaagttttg gctatctgag tttattttct aacacaagcg
     2041 cgaataatac cgcttttgga tattacgctc tttatagtaa ctcaacaggg caggcaaacg
     2101 tagcaaacgg cgcttatgcc ttacttttca acacctccga ttataatgtt gctacaggtt
     2161 ttaaagcttt atattcgaat accgggggtt acgcaaatac cgcaacaggt ttccaaacac
     2221 ttctaagcaa cacagacggg atactaaaca caggtacggg ttctgaagcc cttctctcaa
     2281 atacgaccgg aagttacaat actggtacag gataccaatc gcttttttca aacaccaccg
     2341 gtgctgataa tacagctaca ggattagacg cgctgcatta caacacaact ggcagctaca
     2401 acacatccac cgggagagat gcacttcgta ataatacaac cgggtacgct aatacggcaa
     2461 caggctggca tgcgatattc tctaacacca cgggttactg gaacacggca gagggcaatg
     2521 aggcacttta ttcaaacacg tccggtgcct ccaatactgc atgtggctat cagtctctgt
     2581 ttttaaatac ttcaggcttt tacaataccg caataggacg gtttgcactt tatgccaata
     2641 cgactaatca ttataacacg gccattgggt accgcgctct tgaaaccaac acaacgggaa
     2701 gtaccaattc tgcactaggc gcatacgctg acgtttcttc gggcacctta accaatgcga
     2761 cagcaatcgg gtattttgct catgttgatg cctcagataa aattcgtttg ggaaatactt
     2821 ccataacctc catcggaggg caagttggct ggacaacttt ttccgacggg cggtataaaa
     2881 aaaatatcaa agaaaatgtt gtcggccttt catttattaa aagcctgcgg ccaattactt
     2941 atacggtgga tataaatggt ttaaacgatt attacaacaa aaaaagatcg ctgaaagaaa
     3001 aagaagaacc cggtgaaaca gaacaacagt ccgaagaatc agccggtaaa atggtgttta
     3061 atggttttat agcacaagaa gtggatgaag ccgcaagaaa actgaactac gaattcagcg
     3121 gcgtagacaa accacaaacc aaagatggga tttatggatt acgctacgat aatttcgtag
     3181 ttccgctggt aaaggcagtc caggaattat cggcgaaaaa tgacgatctg caaaaacaga
     3241 ttgacgattt gaaagcagtg ataagcgccg gcaatcaaaa tctaacatcg gcgcaatcat
     3301 cgaaaattac ttcggtcaat tcatcgctcg aacaaaatgt cccaaatcca tttagcaatt
     3361 ataccgtaat caattacact ttaccggaaa ctgttgtgtc agcacaaatt atcatcgctg
     3421 accaatcagg aaaggtgtta aaacaagtgc aggttcaggg cgcccgcaag ggttcgttac
     3481 gaattgacgc tcccggtctg tcttcaggaa cttatcaata ttcattactg gtgaatggaa
     3541 atgtaacgag cacaaggcag atggtcctga caaaataaaa gctcattaca attgagacaa
     3601 cagttacaaa taaaaattat gatacactac aaccgcgcct cggcaaaaaa ttgcattcaa
     3661 tctataaaaa tgcaacgaca actaacttca aagcctttac ctgttttaca cgctcttaaa
     3721 cataacaccg ttttatgcat gttaatgtgt tttgttttat ccgcatcggt tattagcgcc
     3781 caggacactt ttcttggatt aacttccaat ggcgggcccg aaggcagagg aactgctttt
     3841 tcgatcagaa gcaccggagc aaattttgcg gtaaccaaag gttttgcaga ctggggaaaa
     3901 actccgaacg gtgatttaat acaaggcagc gatggtgatt tttatggtat gacctacacc
     3961 ggcggcacct atacttacgg aagtatcttc aaaatgactt tggccggcgt tataacaata
     4021 ctgcatcagt ttaattacgc cgcagatgga gccaatccgt atggagaatt aacaaagggc
     4081 actgatggaa atttttacgg gatgacgagc agcggcggca caaatagcta cggaaccatt
     4141 tttaaaatca cgccgggcgg ggtctttacc gttttaaagc agttagtatc tgctgatggc
     4201 actaatccgc ggggccatct cgtattggct cctgatggaa atttttatgg tgccagttat
     4261 gccggaggcg cctttggttc gggcactatt ttcaaagtca ccgccgcagg tgctttaacc
     4321 gttttacatt cattaagcag tgccacagat ggcgctaatt gctacggcag ccttgttcgc
     4381 ggcactgacg gcctttttta cggcaccacg aacggaggcg gttcaagtgg aatgggcact
     4441 atttttaaaa taacttccgc aggcgcttat actgttttac atactatgct cacggccgat
     4501 ggtgttcact ctcaaagtga tcttatacaa gctactgacg gcgactttta cggcgtagct
     4561 tacggaggtg gtgcaagtgg cggtggtacc gtttttaaaa ttaccgccgc tggaagtttc
     4621 accgtgctca aaaatttgac tgccgctact gatgggcagg cgccttatgg agggctggta
     4681 cagggaattg atgggctgtt atacggtatg aatagtgggg gtggcgctca tagcaatggt
     4741 acggttttta aaatgacaac gacgggaacg cttactcctc tgcgttcttt aacaacagtc
     4801 accgacgggg gttctccaag aggcaatctc atacaggcaa cagatggtaa tttctatggt
     4861 atgacaagca ctggtggaaa cagtgccttc ggaacagctt tcaaaatttc ggccacggga
     4921 acattcacgt tattgaacgg cttcaatggc agtgtaggcg gtaatactcc gttcgaaagt
     4981 ctgacacaat ctataaagga caatgcttat tatggcacca cgaacagtgg cggagtttat
     5041 aactacggca ctgtttttaa attgtgcggt ggtgtacaca ctgttataca ttcattcaac
     5101 aacaccgtag atggaggctc gccccaggga agtttagtac aaggcaccga tagcaacttc
     5161 tacggtatga catattcagg cggcacaaat ggatctggca cgatcttcaa aattaccgct
     5221 acaggcacct ataccgtttt gaaaaacctc ttatccagta cagatggcgg attgccaaaa
     5281 ggcagccttg tgctgggaac cgatgggatc ttttatggca tgacaaatac gggcgggact
     5341 aacggcggtg gtaccatttt caaaataacg agtgcaggag cttttaatgt attaaggtcg
     5401 ttattatcat caacagacgg tgctaatccg gaaggcaatc ttatacaggg cgctgatggc
     5461 aatttctatg gcatgacttc ttcccccgca agagtgttca agattacacc agccggagtt
     5521 tttacaccgc ttcatacttt ttccggaaat gacggcggtc ttccattagg ttctttactg
     5581 cttgccgcag atggtaattt ctatggcacg gctagcaatg gcggtctcaa tgcaggtggt
     5641 acaattttca aaatgacaac tgcaggcatt tatactgtgt tacgaccttt aacctcggca
     5701 gcggatggca gtgcaccaaa aggaaattta cttcagggaa ccgatggtaa tttgtatggc
     5761 atgactagtg ccggtggaac ttacgcagcc ggtacgcttt tcaagataac cacagggggc
     5821 acgtataccg tactccgtca ttttaatttg ttggcggatg gaggcattgc gtttggaagc
     5881 ctgataagaa ccgtaaataa tctcatagct gatcctcaaa ctataactac aaccgaagat
     5941 gtgtccaaaa agatcacgct caccggttca ggaggcagcc ctcttgtttt tactgtaacc
     6001 accaaaccga aacatggctc ggtttcggga aatggcagcg cgaaaacata taagccgaaa
     6061 gccaactatg aagggaaaga ttcatttgct tttactgtaa gtgtgggctg cttatcttca
     6121 cctcctgcaa taattaaaat tacaattaca gcggttccgg atacaccaaa gctcgccccg
     6181 atcggcgaca aatcagtggt aaaaaatacg acgcttactt tcacagcgaa agccacggat
     6241 cctgacaaag gagaatccct tactttctca ttaatcggtg cacctgcagg agcgagtatt
     6301 ggtacaacgt cagggatttt cacgtggatg ccaacaacca gtgggagctt catatttaaa
     6361 gtaagggtta cggacaatag cgctcttgca ttatacgatg aagaacaaat aacagttaca
     6421 gttactaatg ctactcctca gaataatgcg gtaagcagcc agatagttgc aggaaagttt
     6481 atagatgcaa cgctttctcc aaatccggtt gtaaacaaac tggtggtgat actgaatgtt
     6541 cctgtagatg aggtaagcgc aacgattaca gatctgaaag gggttgtgcc gatcaaacct
     6601 caattcacga tctctggcat tcaaaaattc gaaatagatg cttccacatt aaagcctggt
     6661 atatattttc tacggttgga aacaaaagat ggaaataaaa cttacaggtt cataaagcag
     6721 taagtgtcgc taatatatca ttgaggcaga gtttttaacc tgtgtcgtgt aaaacgtcac
     6781 aggttttttt tgatccggaa ttaaataaaa gatccctcct tcagcactgc gactgtaatc
     6841 gccaattcct ccaaaccaaa acaatcctat aacacgattg tcctgccatc aaggtcttat
     6901 actgaccaaa ttacccagat agcaacttat tcatttcatt aaatgatttt taatgagatt
     6961 agtagctttt tgaggtcctt tgtttccaag cggttggaac tttttcttgc ccatttcatt
     7021 gtaggtaata aaaaaattaa ttatttcatc aactaaatac ttatcaagat tttttaagga
     7081 agttaaagca ccgtatcgct gggattctat tgctgccgtg atcaatcggt catttcgcat
     7141 agaatcgcca tttttttcgg tctgttttgc ttcaatgatg ccgagcactt tgcattcaat
     7201 aagatttcct ggataagacg gctcatccat taagacgagc gcatcgagcg gatctccatc
     7261 ttcaccttta gtgcacggta taaaaccaaa atgaagcgga aaaaccaagc cttccggaag
     7321 aattttggtc aatttgaaca attgggtttt tggatcgaac gcgtacttgt ttccacttcc
     7381 tttaggcgtt tcaattatta catgtatgtt atctgtgtct ttaacaaagg caggtggtag
     7441 tttcatgggt aagctttttt attggagttt tctgattaaa tttatcctta cacttttgca
     7501 acatgttgcc ctctcttcag ttctgtagca gatgacattg tatgaacgca ataaaaggta
     7561 tgccaatcat cagatcatat gcatttatgc tgagtttttg cgctgaatta cattgcgtat
     7621 agcgatctat aagtcatctg acaccgtttt ggctttaatt tttgactgtg aaatatcaga
     7681 acctttaaaa atggaacaaa gcgtctgcaa aaacactgcc cccttgaaaa atctgaaacc
     7741 ttcggataaa gcaggggaat tggaaattat tgtaattact ctacgagatc cattgaggcg
     7801 cgactgttat cattttaagt aatcgtcttt aaaaaaatga tatcttagtg atcctccaaa
     7861 aattctcaca atgaaactcg atcctattat aatcattgat gacgatgaag aggattgcga
     7921 gttattaaaa atcgggtttc aacatttaga catcaaaaac cagctcattg tcttcaacag
     7981 ctcaagagat gcgttgactt atctgcagtc gttcaacggc caggtttttt ttattctctg
     8041 tgatattaat atgcccgtga tggatggtat tactttacgc cgaaagatca acgaaaatga
     8101 agcattacgc tttaaatcaa ttccgttttt atttctctcc acatcgggca gtgagcaagt
     8161 agtaaacaac gcctattcac taaatataca gggctatttt aagaaaccaa acagcgttaa
     8221 agaaattcag caaatactat caaggataat ttcttattgg gatacttcat atcgcccgtc
     8281 gattacgcaa taaataatcg tttaatagaa aggctgcaac gacgcggcca gtccgatttc
     8341 gtaacatgtt aaatggctcc ctcgaaaagc cgccaaacat aaaaacattt attgctgaat
     8401 tattcgataa tgcatatgcg ccggcgtttc actttgctct ccgtaagaaa tgatatccca
     8461 aaaaaccttt tttaaacctt gcgaagagtt ttttttataa agaagccgtg cgaagatagt
     8521 tcataggctc ttttcacctg ctgtttagtt gcagtaccgg accaaaagat aaaagggata
     8581 cttgcctggc gtatagatga atctttgatt attcgttctc gcagaataaa accgtccatc
     8641 ttgggtaagt ttacatcgca gataataagg aacggcgaag gtttgttgga attcaaataa
     8701 tcgattaatt gatcacctct tttaaaaaat aaaacgggca agccaacatt taattcgtcc
     8761 attatttcct ttacctataa ccatcatcgt cgtcatccac aattataata ggtgcagaag
     8821 aaaagtaggg gccatgtata aacataacta agccacgcaa cgcatggctt agttatacat
     8881 aggtaaaacg ttttattcta cttcctccgc ggcttggtag tttatacctg attcggctaa
     8941 ctgggtaagc aattcatcgg tttctttttc ttctgccaaa gtttgcgcta aaatatcggc
     9001 aacttcggtt aaccctaatg tggttgctag ttgggctaaa ccgccataag tagaaatttc
     9061 atagtgttct actttttggg cagatagtat gagtccgaca tctcttgttg cagttccctt
     9121 ttctgtctct tcaataatgc cttttccttc ttcaataata ccagccatag catcacattt
     9181 ttttgcctgt gctttttcac ctaatagttc aaacgcctgt tcaaggcgcg ctacgtgctc
     9241 ttgcgattgt tgtgtatgcg tttcaaaagc attctttaat tcttcagacg tggcagcctt
     9301 ctgcatttta ggtaacgtag ttacaatatg cttttctgcc cagtatatat ctttcaattc
     9361 atctataaag aattctttca gcatagaatc ttcagatgct atgccagcct tataattaga
     9421 gttgttgctt ttgcgtgtcg aagacttttt gtttgatgtt gccataagta tatattttca
     9481 acttatgata tgaatatcgt gccattaatt agacgcagcc aatttcttgt tacgtcagaa
     9541 aagagcaaac caatttgcat tgctcccggt cgcaaaagcg taagtaaaaa gtttcagctt
     9601 gtaataaccc tgcccagccg ttcatattta ctgtaaccgg ttatcaattt tgcgttgccg
     9661 gcctgagtct ttattacaag tgtaggaaat cgtgtaatgt gaaatgaggc tgtttcattc
     9721 aaatcttttc gcaaagcatc aagcgatctg ttgtttgcca tatccctttc gaactgggtg
     9781 taattaaact tgatcttttt atccttcgca agttcaaacg ctaactcaaa taaaacatct
     9841 ttttttgcaa tgtttttact ctctagcatg catgcgctgc gcaaaaattg caaatatttt
     9901 tcacctgcat cagcagattg agattccgca catttaaatg cgaagcacgc aggataagag
     9961 gaagcaggcg ggtcttttac ccatatatcg ttctgtattt tgatgccggt gacttctgca
    10021 gcatgcatcc atacaggccc catttgtacc gggcggctaa ctgaattaaa gacatcatga
    10081 taattcttcc atgaaggtaa aagcccgccc atgcaatagc ggtatttcaa cctttcacca
    10141 agcgccagct ttaacttttg ccactcaggt tcaaatgccc agctccagca gcaaagcgga
    10201 tctgtgtaat aggtaatttg cacattcccc actttctgta ataactcaat actatctttt
    10261 tttgcctgat ttttttgcgc tggcactgct agcttttgtt ttagttttta atatagtctt
    10321 ttgttttgtg ctgctgccgt tttcatttcc gttacctgaa aaagaatcag tccattgctg
    10381 cgctttattt ataggtgaag ccatatttat ttcttcacta cgcagttcac ttaatgcttt
    10441 atttgctttt tgtacagagt tttcatcacg gtctgtacct gttgcttcct ggtttagaag
    10501 accgtttgtt tgcatcacat gcgcaaccgg atcttctata aactggaatg tttcgttcag
    10561 tcttgaactt tgcccttcat tccaatcgcc acgaaaatca ttaccagtgc tcatattgaa
    10621 atataaattg ctgtatcgcg gatcgctttg caaaatgccg gggggaaagt ttggctgaat
    10681 tgtttccagt gctgcttcaa acatctgaaa atgcgctact tctcttgtca ttagaaaacg
    10741 tagtgtttcc tttacataag gatcgtctgt aaactgcagc aggtattcat aaactaattt
    10801 agcacgtgtt tctgcagcta catcagaacg aagatcagac gttagatcac cttgtccgtc
    10861 gccgtttatg tatgcagccg tccatggcac gccctggcta ttggtatagc acggagttcc
    10921 agcgcttccc accaaaaact gtggcgcaat catccctttg tgtatcatat cttctttcgc
    10981 agccttgccg ttaagcagtt gcataatttc agcattatct gctgcgtttt tcagatcgcc
    11041 attgataccc gttaataaca tttgaatagt agcgccaaca atttcaaggt gactaaattc
    11101 ttcagtagca atgtccataa gtaaatcata tttgtcagga tagggatttt ttgccccgaa
    11161 agcctgggcg aaataacgaa gcgccgccgc caattcccca tttgcgccgc caaattgctc
    11221 taataataat gttgcgaagg cagggtctgg ctttgaaacc cttgcattaa actgcaattc
    11281 ttttacatga taaaacatac aatggtgttt ttaaggttaa cagataccac gctaaggcag
    11341 aaaaattatg ccatgaaatt catcgcacgt ccgtattcag cagctcgcat tcagctcgag
    11401 ctcgtcgcac agtcttgcag tgctgtcaac ctgctgccaa tgtttgtgct cctctgcaaa
    11461 acctgcgcaa ggtgcggttt gtcctgctgt ttggcggcgc acaacgcgtg gtacctagaa
    11521 aaacacccgc agaagactcc cctgaataca ttcttgtctg tcgtctcgtt gtggcttcct
    11581 gagccaagag ttatggcagg aactggcgcg gagtgcatga ccagacaatc agagacacaa
    11641 gatcatcagt cagtattact ttactgacaa aaa
//
LOCUS       DASQJI010000760         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1496748,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000760 DASQJI010000000
VERSION     DASQJI010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496748"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..645)
                     /locus_tag="VEV83_20255"
     CDS             complement(202..645)
                     /locus_tag="VEV83_20255"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47526.1"
                     /translation="MKQNPVVHFEMPYEDSERLTKFYSEAFGWQMHKFGSEMGDYVTA
                     GTTETDENRMVKTPGAINGGFYPKKAPGAAPNPSVVIAVDDINDAMKRVRDAGGNVLG
                     EPVEIPGVGHYVSFTDTEGNREPFAAVKHVTIDRYRLRSKLTVDI"
     gene            complement(1300..>2266)
                     /locus_tag="VEV83_20260"
     CDS             complement(1300..>2266)
                     /locus_tag="VEV83_20260"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HYK47527.1"
                     /translation="IGVIKDPGEIDAVGHRVVHGGESFAATTIVTRKVKEEIKKLFPL
                     APLHNPANYLGIEVAEKIFSKAKQVAVFDTAFHQTLPEKAFRYAIPKSFYTDLHIRAY
                     GFHGTSHKYVSETAMEHLNNRAAKLVTLHLGNGCSMTAVKNGTSVDTSMGFAPLNGLI
                     MGTRSGDIDPSMIFHLIKLGYDPQEVNTLLNKKSGMLGLTGFSDMRDIDNAVQQGNKD
                     GDLALEMYAYRIKKYIGSYAAVLNGLDAIVFTGGVGENHVNTRHRVCSEMDFLGVRLD
                     EEKNNRRSTGVREINSDDSPVKILIVPTNEELEIAKQCYALLKKA"
BASE COUNT          535 a          550 c          501 g          680 t
ORIGIN      
        1 tgagacagaa aaagcttcaa aacacgtttt cactcgttct tgtcgccctt tttttcttgt
       61 tagggatact ctacttttta agttgatgtt ctcgttaatg atcaccgcga tgcgcgaaag
      121 ctagtactgc ctttcagcgc cggcaatggg agggtagatg cgcccaagca catgaagatt
      181 gaaaaattgg ttgctgaaaa tttagatgtc gaccgtcaat ttcgaacgca accgatatct
      241 gtctatcgtt acatgtttaa cggctgcaaa aggctcgcgg ttgccttcag tatcggtgaa
      301 tgaaacatag tggccgacac cggggatctc aaccggctcg ccgagaacat taccacccgc
      361 atcacgaact ctcttcatcg catcgttgat atcgtctaca gcaattacga ccgacggatt
      421 tggtgcagca cccggcgctt tcttaggata aaagcctccg ttaatagcgc ccggtgtttt
      481 taccatcctg ttctcgtctg tttccgttgt gccggcggtt acataatcgc ccatttcgga
      541 accgaatttg tgcatctgcc atccaaaggc ctctgaataa aattttgtaa ggcgctcgct
      601 gtcttcatat ggcatttcaa aatgcactac aggattttgt ttcattgatt ttaatttttg
      661 tgtggagtga attttcagca aaaaccttgc tgttttttgt gaccgataaa gttagaaatt
      721 tagtatgatg atcgtcgaag atgtcgttac cgatggcagt aaaatttaat atccaggcta
      781 tcgatgcgtc aagaaatttt tgtgggtcgc gaaggccata acgaagcgac ttacacaacg
      841 attcctgata gagtgaacgt tgtgttgttt tgtgttgcac aatttttgga cgcatctgcg
      901 caccttctgt aatgaactct tgtatgtgtc aattttttaa accacagagt tgcgcagagt
      961 ttatcacgca gttgcacaga gcatctccgc tttccgatac cttgcggctt gtcctcgcgt
     1021 tgtgttcttc gtgtatccat tgtgtccgtt gtgctccaac agccagcccc gaagggcgag
     1081 atttggttaa ccccggatga aatccgtcga ttaaccaatg ttgcacagag catctccgct
     1141 ttccgatact ttgcacgtcg tctcgcgccg tgaccttcgt gccaccattg tgtccgttgt
     1201 gctccaatta ccagccccga aggggcgaaa gctgattaac cccgcatgaa atccgcggat
     1261 tcaataaatc gacacccatt tgcaaaaggt cgcgaatttc taagcctttt tcaacaacgc
     1321 atagcattgt ttcgcgatct caagctcttc gtttgtgggg actatcaaaa tttttaccgg
     1381 ggaatcatcg ctgtttattt ccctgactcc tgttgatcgc cggttatttt tttcttcatc
     1441 caggcggaca cccaaaaaat ccatttcact gcacacccga tggcgagtat ttacgtggtt
     1501 ttcacctact cctcccgtaa acacgatcgc atcgagaccg ttaagtaccg cggcatagga
     1561 gccgatgtat ttttttatgc gatacgcata catctcgagg gcgaggtctc cgtccttgtt
     1621 cccttgctgc accgcgttat caatatcgcg catatcgcta aaaccggtta gccctaacat
     1681 gccgcttttt ttattaagca atgtgttcac ctcttgcggg tcgtagccaa gcttgatcaa
     1741 atggaaaatc atcgaagggt cgatatcgcc ggagcgggtt cccatgatca atccattcaa
     1801 tggcgcaaag cccatactcg tatccactga tgttccattc ttcacggcag tcatactgca
     1861 gccatttccg agatggagcg tgaccagttt tgcagcgcgg ttatttaaat gttccatcgc
     1921 cgtttcgctg acatatttgt ggctcgtgcc atggaaaccg tacgctcgta tatgaagatc
     1981 tgtataaaag gatttcggga tcgcataacg aaatgctttt tcaggcagtg tttgatgaaa
     2041 cgctgtatca aagacggcta cctgtttcgc ttttgaaaaa attttttcag ccacttctat
     2101 tccgagataa ttggcgggat tgtgtaacgg ggcaagagga aaaagttttt tgatctcttc
     2161 tttcactttt cttgtgacga tcgttgtagc tgcaaagctt tcgccgccat gtaccacgcg
     2221 gtgaccgaca gcatcgatct ctcccgggtc ttttataacg ccgatt
//
LOCUS       DASQJI010000761         5722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_267907,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000761 DASQJI010000000
VERSION     DASQJI010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5722
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267907"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VEV83_20265"
     CDS             complement(<1..413)
                     /locus_tag="VEV83_20265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47528.1"
                     /translation="MYTCSRKYLLYLACSVMLAAISCKKNDSSIVPDNDAIKYYPLAT
                     GKIWIYRLDSTTTPPFGTSLIVRSYHLKDSMGASFPDNAGRESWPVYRFITDTLEQNP
                     WRSLSTYYVTPVEKNIEVVDDNNLRFIKLVTPVKE"
     gene            complement(596..2560)
                     /locus_tag="VEV83_20270"
     CDS             complement(596..2560)
                     /locus_tag="VEV83_20270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HYK47529.1"
                     /translation="MNKSLNRVTAAGLLVALGIIYGDIGTSPLYVFDEIVKGRIINDN
                     LIIGSLSCIIWTLTLQTTIKYVILTLKADNRGEGGIFSLYALVRRQKKWLVLPAMLGG
                     AALLADGMITPPISVTSAIEGLRQIYQIPMLVHISGKTIVIIVVSILALLFFSQQFGT
                     ASIGKFFGPIMLIWFSMLAILGAFHLSDDLFILKALSPHYAFELLTVYPQGFWILGAV
                     FLCTTGAEALYSDLGHCGRGNIRISWIFVKTCLVLNYLGQGAYLLSHFKGQTFDTDTL
                     KVLYSLMPNWFRLIGIMIATTAAIIASQALISGSFTLISEAIRLNLWPKMKIKYPTEA
                     RGQLFIGGINVLLFLGCCGIVLFFKNSTNMAAAYGLAITICMISTSILFANFLVSRRI
                     RPWWIYLYLVVYLTIELSFLTANLQKFPHGGYVTLIIGGGLFSVMYIWYRSRKIKNRY
                     VEFVRIDDYISMIQELSNDRMVPKYSTHLVFMTSANNPREIEHKIIYSILNKKPKRAD
                     IYWFVHVDTLDDPYTSEYSVDHIIPNDIIRIEFRLGFRVQQRINLMFRKVVEELVAGN
                     EVNITSRYESLERNNIVGDFQFIVMEKYLSSDNELPFFERVIMKLHFWLKDASLSEER
                     GFGLDPSFVTLEKFPLMVSPVTDIKLKRVE"
     gene            complement(2709..3395)
                     /locus_tag="VEV83_20275"
     CDS             complement(2709..3395)
                     /locus_tag="VEV83_20275"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47530.1"
                     /translation="MNKAEILVVDDEPQIRKLLEITLQANDYKVSEAATANEGLIMAA
                     NHPPDLVLLDLGLPDENGHSVLQKLREWYNRPIIILSVQSSEEDIIKALDNSATDYLV
                     KPFRTGELLARIRSALRKAASEENNPVLIFDDLQIDLAARTVKRKNELIKLTSTEYHL
                     LALFAKNEGKVLTHHHILRQVWGPGFTLETQYLRVFIANLRKKIEDNPNQPKYIITES
                     GVGYRFIARE"
     gene            complement(3388..4530)
                     /locus_tag="VEV83_20280"
     CDS             complement(3388..4530)
                     /locus_tag="VEV83_20280"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47531.1"
                     /translation="MLNLFFKINKSLQYIIAIGLVCFVASVCYFLSVYIGYKVIALIL
                     LVAVSLIAMFFDIVPVLVSAILSALIWDFFFIPPRFNLTVAAGEDSLLLLMYFVIALV
                     NASLTFKIRQIEKKASEKEEKENAIKLYNTLLNSLSHELQTPIATIIGATDALRDRET
                     KLSNENKNELVNEISIASLRLNEQVKNLLNMSRLESGFLQLKKDWCDINELIYSAVNK
                     VHLKVCNRKIQIAVPENFPLFKLDFGIMEQVIYNLLTNAFQYTPCNSTISIAVNYSNI
                     VKGHFDVDENVSIVHRDSVSTKMTIIISDNGPGFPEKDINKVFDKFYRLDTSRTGGTG
                     LGLSIVKGFIEAHKGTIELTNNVHGGARFKIQLPAEVSYLNRLKNE"
     gene            4903..5115
                     /locus_tag="VEV83_20285"
     CDS             4903..5115
                     /locus_tag="VEV83_20285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47532.1"
                     /translation="MNQHHQILEADRLLTGTNEFGETDAVFSTVIGMINKENLFVAKI
                     TAFCCTGQEPSCIWVTQLKGSDSSYI"
     gene            complement(5086..>5722)
                     /locus_tag="VEV83_20290"
     CDS             complement(5086..>5722)
                     /locus_tag="VEV83_20290"
                     /inference="COORDINATES: protein motif:HMM:NF019237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1566 domain-containing protein"
                     /protein_id="HYK47533.1"
                     /translation="HPNLSLKNPLSCINFQTKNFIMKLSTKIGLAIMLSAFSCTKEGG
                     HISSRTSTQSLNNSVTTKVHVGDTLGGGIVFYVDSTRVHGLIAAVADQGRIRWYNGAF
                     TVTGAKGKKIGTGADNTQEIINSQGAGGYAATLCVTYRGGGYTDWFLPSKAELGQLYK
                     HKDVINGLSNFFYWSSTEVDSTKAWSMSFYSGTYSEKSKGGQLDVRAIRTF"
BASE COUNT         1700 a         1166 c         1125 g         1731 t
ORIGIN      
        1 ttttccttaa cgggagttac cagtttgata aaacgtaagt tgttatcatc aacaacttcg
       61 atgttttttt caactggcgt cacgtagtaa gtcgacaaac tgcgccacgg gttttgttcg
      121 agtgtatcgg taatgaagcg atacaccggc cacgattcgc gacctgcgtt gtccgggaaa
      181 gaagctccca tgctgtcctt taaatgatag ctacgaacga tgagtgatgt accaaaaggc
      241 ggtgtcgttg ttgagtccag tcgatagatc cagatctttc cggtagctaa aggataatat
      301 ttgatcgcgt cgttgtcggg tacgatcgat gaatcatttt ttttacagga aatagccgcg
      361 agcataactg aacacgccag gtacaaaaga tattttcggg aacaggtata catcaaaagg
      421 cgtaagctaa taagaatttg ttatatggct taaacgtttg gcggaagcat tttcttattt
      481 caggcgttat tttactccgt gcccggcttc ggtcatacca ggacgtgata tccgactaag
      541 ctttcatcgg caataaaaaa actaaaatta gaaccatgtc caatttcagt ttcaattatt
      601 caactctttt caatttgata tcggtgacag gagagaccat aagcggaaat ttttcgaggg
      661 tgacaaaact tgggtcgagt ccaaatccac gctcttcact taaacttgca tcctttaacc
      721 agaaatgcaa tttcataatc actctttcaa aaaagggcaa ttcattgtcg cttgacaaat
      781 atttttccat aactatgaac tggaaatctc ccactatatt attgcgctca aggctttcat
      841 accggctggt aatatttact tcattgcctg ctaccagttc ttcgacgact tttcgaaaca
      901 taagatttat tctctgttga actctaaaac ccagcctgaa ttcgattcgt atgatatcat
      961 tgggaataat atgatcgacg ctgtactctg aagtataagg atcgtctaat gtatcaacat
     1021 gtacgaacca ataaatatcg gcacgcttgg gttttttatt taagatcgaa taaatgatct
     1081 tatgttctat ttccctcgga ttattggcgc ttgtcataaa cacaagatga gttgaatatt
     1141 tcggtaccat ccggtcgtta cttaattcct ggatcattga tatatagtca tcaattcgaa
     1201 caaattccac atacctgttt ttgatcttcc tgcttctgta ccatatatac attactgaaa
     1261 acaagcctcc gccgatgatg agtgtaacgt aacctccatg cgggaacttt tgcagattgg
     1321 cagttaaaaa agacaattca attgtcaaat aaactaccag gtacaaatag atccaccacg
     1381 gtcgtattcg cctgctcacg agaaaatttg caaataaaat tgaggtactg atcatgcaaa
     1441 tagttatggc taagccgtat gctgccgcca tgttggttga gttcttaaaa aataacacga
     1501 tgccacaaca accaagaaat aataaaacgt ttatacctcc aataaacaac tgcccgcgcg
     1561 cttcagttgg atatttaatt ttcatctttg gccaaagatt caaacgaatc gcttccgaga
     1621 tcagtgtgaa tgaaccggat atcagcgcct ggctggcaat tattgctgct gtcgtcgcga
     1681 tcataattcc aatgagccgg aaccagtttg gcattaaact gtaaagcact ttcaatgtat
     1741 ccgtatcaaa agtttgcccc ttaaaatgag ataaaagata ggcgccctgg ccaagatagt
     1801 ttagcaccag gcacgttttt acaaaaatcc aggagatacg aatatttccc ctcccgcaat
     1861 gtccaagatc tgagtacagc gcttctgcgc cggtggtaca aagaaaaact gcgccaagta
     1921 tccagaaccc ctgtggataa acggtaagaa gttcaaaagc gtagtgcggg cttaatgctt
     1981 ttaaaataaa aagatcatcg gacaagtgaa acgctcctaa aattgcgagc atggaaaacc
     2041 agatcaacat gatgggacca aaaaactttc cgatggaagc ggtaccaaat tgctgcgaaa
     2101 aaaataaaag tgcgagaata gacacaacga taataactat cgtcttgccg gagatatgta
     2161 ccaacatcgg tatctggtag atctggcgta agccttctat tgccgacgta acagaaatcg
     2221 gtggtgtgat cattccatca gccagtaagg ccgcacctcc gagcatagcc ggaagaacga
     2281 gccatttttt ttgacgacgt accaatgcat ataaagaaaa tattccaccc tcacctctgt
     2341 tgtcagcttt taatgttagg atgacgtact ttatggttgt ttgcaatgtt agcgtccaaa
     2401 tgatgcagga caaactgccg attatcaggt tgtcattaat aattcttcct ttaactattt
     2461 catcaaaaac atacagcggc gatgtcccga tatcgccata gattattcca agtgcaacca
     2521 gtaagcctgc tgctgttacc ctgttaagac ttttattcac ggatgatctt tacaatttga
     2581 tctcaatttt gaaatgaccg cgtataccag gcgaatgcac ttcacgaagg caattactac
     2641 attgtctaaa atgagtggtc gtctcgccga tggcgaatca atatcatgtt tgctgcattt
     2701 ttttagagct attctcttgc aataaaccga tagccaacgc cggattcagt aataatatat
     2761 ttcggttgat ttggattgtc ttcaatcttt tttctcaggt tggcaatgaa tactctcagg
     2821 tactgtgttt ccagcgtaaa accaggcccc cagacttgcc ggagaatatg atgatgcgtt
     2881 aaaacttttc cttcgttttt tgcaaacaag gcaagcaggt gatattcggt tgacgtgagt
     2941 ttgatcagtt cattttttcg tttcactgtt cttgctgcca ggtcaatttg cagatcgtca
     3001 aaaatgagca ccgggttatt ttcttcggaa gctgctttgc gtagcgcaga acgaatgcgt
     3061 gcaagcagtt ctccagtgcg aaatggtttt acgaggtaat ccgttgcact attatccagt
     3121 gcttttataa tatcttcttc gctgctctgc acagaaagaa taattatggg cctgttatac
     3181 cactcgcgta atttttgtaa aacggaatga ccattttcat ccggcaagcc caaatcgagg
     3241 agaacaaggt caggcggatg attagcggcc attatcaaac cttcgttagc ggtagcggct
     3301 tcagatactt tgtaatcatt tgcctgcaaa gtaatttcta acaactttct gatctgcggc
     3361 tcatcatcga ctactaatat ttcggcctta ttcatttttt agcctgttta aataagacac
     3421 ttcagcagga agttgaattt taaacctggc acctccatgc acattattcg taagctctat
     3481 tgttccttta tgagcctcta taaaaccttt cacgatggac aggccaaggc cggtacctcc
     3541 ggttcgcgaa gtatccaggc gataaaattt atcaaacact ttgtttatgt ctttttccgg
     3601 gaagccaggc ccgttatcgg aaatgataat ggtcattttt gttgaaactg aatccctgtg
     3661 aacaatgctg acattctcgt ctacatcaaa gtggcccttg acaatattgc tataattaac
     3721 cgcaatggaa attgttgaat tgcatggagt atattgaaac gcattcgtga gtaggttata
     3781 aattacctgt tccatgatgc caaaatcaag tttgaagagt ggaaagtttt ccggcaccgc
     3841 aatctgaatt ttacgattac acaccttaag atgcactttg tttactgctg agtaaataag
     3901 ctcattaatg tcgcaccaat cttttttaag ctgcagaaag ccggattcga gtcttgacat
     3961 attcagcagg tttttcacct gttcattcag tcttaaagaa gctatcgaaa tttcatttac
     4021 cagctcattt ttattttcgt ttgaaagttt tgtttctctg tcccttaaag catctgtagc
     4081 tccgataatt gttgctatgg gtgtttgtaa ttcatgtgaa agtgaattaa gaagcgtatt
     4141 ataaagttta atagcgtttt ctttttcttc cttttcactt gccttcttct ctatttgccg
     4201 aattttaaac gtcagcgatg cattcaccag cgcaattaca aaatacatga gtaaaaggag
     4261 agaatcttcg ccggctgcga ctgttaagtt gaaacggggc ggaataaaga agaaatccca
     4321 aatcaaggcg cttaatatgg ccgagaccag tacaggcaca atatcaaaaa acatggcgat
     4381 caaagaaact gcgaccagaa gaataagcgc aatcacttta tagccgatat aaacagaaag
     4441 aaagtaacaa acagatgcta caaaacatac taaaccaata gcaataatgt attgtagcga
     4501 tttattgatc ttaaaaaata agtttagcaa ttattatctt aattgaacac gtaaaattag
     4561 tggggcgtgt ataaagattg tataaaactc tctatggact gcataaagat tttataaaga
     4621 cggtttttaa atgactgaaa tggttttcta tttgtcattt agtttttgaa agcagaaatt
     4681 cgggccgggt tgcgttggga tttttattga ctgatattat tcggccttat taattttttt
     4741 aggtgcactt ttcgaaacta tcgccgcgat taaacttaat cgctgacagt tgaaggtatg
     4801 ggaataaaga cggcagggtc gcgaatctgt cctcacattt atttcttcat acttaacaaa
     4861 tctcagaaat ataagcttga ttaaatagta agcttgatta agatgaatca gcatcatcaa
     4921 atattggagg cagatcggtt gttaacaggc accaatgaat tcggtgaaac cgatgcagtg
     4981 ttctcaacag tgatcggcat gataaacaaa gagaatttat ttgttgcgaa gatcacggcg
     5041 ttctgctgca ctggacagga accgtcatgt atttgggtaa cccaattaaa aggttctgat
     5101 agctcgtaca tctaactgcc cgcctttact tttctcgctg taagtcccac tatagaaaga
     5161 catactccat gctttagtgc tatcaacttc ggttgaactc caataaaaga aattacttaa
     5221 accgttgatc acatctttgt gcttatataa ttggccaagt tctgctttcg atggtaaaaa
     5281 ccaatcagta tagcctccgc ctcgataagt tacacacagc gttgcagcat atccgccggc
     5341 cccctgtgag tttattattt cttgtgtatt gtcagcacct gtgcctattt ttttcccttt
     5401 tgctccggtt acggtaaatg ctccattgta ccatcttatt cttccctggt ctgcaacagc
     5461 agcaatgaga ccgtgaaccc gggtagaatc aacatagaat acaatccctc ctccaagagt
     5521 atcgcccaca tgcactttag ttgttacaga attattaagg gattgcgtgc tagtacgaga
     5581 actaatatgg ccaccctctt tcgtgcaaga aaatgcagat agcatgatag ccagcccgat
     5641 tttagttgaa agtttcataa taaagttttt ggtttgaaag tttatacaag ataagggatt
     5701 ttttaaacta aggtttgggt gg
//
LOCUS       DASQJI010000762         2739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2877681,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000762 DASQJI010000000
VERSION     DASQJI010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2877681"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(497..1627)
                     /locus_tag="VEV83_20295"
     CDS             complement(497..1627)
                     /locus_tag="VEV83_20295"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYK47534.1"
                     /translation="MGTNTTTTNSKCSSNQIDIGGTCTSKAEVSKQIISITQGVMQKE
                     DAKGVLLRVDVDNGTVVKTGLGDSQEGVPATPDMKFRPGSMAIPMLTTLVLQLQEQGK
                     LSLDDTLSKWFPQYPNADKVTLRMLSSVTSGYPDYIQENPPFQAALLAEPFRHWTDDE
                     LLQYAFAQSIVCDPGACFHYAHTNFIILGNVVEKITGKSITELLQQKFLGPLGLTETN
                     ITKLPAIPSPALHAYTSERGVYEESTGWSPSWGLGDGLIMTSTLRDMTTLIKAVGTGK
                     LLSKESASEQVEDLSKGLPGAPGQIGYGLGVAVGNGWVLQNPVFNGYEGIAAYLPSQQ
                     LSIVIDNTHGPNAAEGTSIATDIFKALAAYLAPTLPSTVKDR"
     gene            complement(1742..2050)
                     /locus_tag="VEV83_20300"
     CDS             complement(1742..2050)
                     /locus_tag="VEV83_20300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47535.1"
                     /translation="MIGSVITVDSISELRAINGKIIQDSFKLNVTDIVKGHTSIGDGG
                     GGNFVWNPSSTKDNNGTVIEPTDRSVVIGGIPKELEVNQFSVSSMKAVGMFVTKLEYL
                     "
BASE COUNT          728 a          643 c          622 g          746 t
ORIGIN      
        1 acacgatgtt tgggaatcac ctcagaagat aggaacctaa tatcatgagt ctttgaagat
       61 atattttcaa gttctatatc aaagacgatg ataaaggcct attatctgaa acaaattcac
      121 cacatattca aacggatgtc ataaaactac tcagctcttc tgactgcaat aagttcgctg
      181 atgctattgg aaagggaaag attgatagaa agtcagaata gtaataatac aaaggttacc
      241 atttcttaca gcataattat aacaacacta ttattattta attaggcacc tgtatcataa
      301 ttagtcacaa cggatttgat ggccatacta ggatatccca tgggtggact aactgagtca
      361 aatttgtctc gccaccgaac ccgctactat ttatagtagc gatgtggggc tgtataagat
      421 gtagggaaat tcctaatctt catcttttta aaacaaatct ttttctgttt tcatattcac
      481 aattgagatc ctatgattaa cgatccttga ctgttgaggg taaagttggg gccaggtacg
      541 cagcgagtgc cttgaagatg tcggtggcga tgctcgtgcc ctccgcggcg ttcgggccgt
      601 gcgtgttgtc gatcacgatc gagagctgct gcgacggcag gtacgcggca atcccctcgt
      661 atccgttgaa gaccgggttc tgcaacaccc acccattgcc gacggcgacc ccaagtccgt
      721 agccgatctg cccaggcgca cccggcaggc ccttcgacag atcctcgacc tgctcgctcg
      781 ctgactcctt cgagagcagc ttgccggtgc cgaccgcctt gatgagcgtg gtcatgtcgc
      841 gcagcgtcga cgtcatgatg agtccgtcgc cgaggcccca cgacgggctc catccagtcg
      901 actcctcgta gacaccgcgc tccgacgtgt acgcgtggag tgcgggtgaa gggatggccg
      961 ggagcttcgt gatattcgtt tcggtgagcc cgagcggacc gaggaacttc tgctgcaaga
     1021 gctcggtgat cgatttcccg gtgatcttct cgacaacgtt gccgaggatg atgaagttgg
     1081 tgtgcgcgta gtggaaacat gcgcccgggt cgcagacgat cgactgcgcg aacgcgtact
     1141 gcagcagctc gtcgtccgtc cagtggcgga acggctccgc gagcagcgcc gcctggaagg
     1201 gcgggttctc ctggatgtag tcggggtagc cggaggtgac gctcgagagc atccgcagcg
     1261 tcaccttgtc ggcgttgggg tactgcggga accacttcga cagggtgtcg tcgaggctga
     1321 gcttgccctg ctcctgcagc tgcagcacca gagtcgtgag catggggatc gccatcgagc
     1381 cgggacggaa cttcatgtcc ggcgtcgccg gcactccctc ctgggaatcc ccgagacccg
     1441 tcttgacgac ggtgccgttg tcgacgtcga cgcgcaggag cacccccttg gcgtcctcct
     1501 tctgcatgac gccctgcgtg atcgagatga tctgcttcga cacctcggcc ttgctcgtgc
     1561 acgtgccgcc gatgtcgatc tggttcgacg agcacttcga gttggtcgtc gttgtattgg
     1621 tacccatagt agaattcgca agcgtattgt ttactgcagt catgttcaca acttgtccca
     1681 ttgctgtagt tggaacgagt atgaacgctg ccagcactaa gcctaagcaa aagggtttca
     1741 tttatagata ctccagtttc gtcacgaaca tacccacggc tttcattgaa ctaacactaa
     1801 attgattcac ttcaagttct ttaggaatcc caccaattac aacagatcga tccgtgggtt
     1861 caatgaccgt tccattatta tcttttgtag aagaaggatt ccacacaaaa ttacctccac
     1921 caccatctcc tatggaggta tgacctttta caatatctgt cacatttaat ttaaatgaat
     1981 cttgaattat ttttccattt atagcacgta attcacttat gctatctact gttattacgg
     2041 acccgatcat attttcaaat atgtagatta atatttaaat ttggtgttaa tagacaaaat
     2101 caagaattaa cggaaaatga ctatcaataa cgggtctaaa ctgctaaaac tagttaattc
     2161 atgcagcaat ttctgcattg agtttatatt aaaatatcca ttcaagaact tatccatgct
     2221 tggaagattc gaaagtcact gatgaatatt aagatattaa ctggtgcata agatagaaag
     2281 atttgtgaat catttatgga tatagaaatg cacctataat ccaaacttca gaaatgtcgt
     2341 gttttatgaa gatataaaat ttttatagaa attaggacat tctttcttac ggttatcgat
     2401 ctatcacgca tattttgttt gtatccatac taactttgcg ttaggattgg gccatttaaa
     2461 tagtcaaatt tgttattagt cccattgagc ccgcattaaa aatttattac ttcttattac
     2521 aaatagatta caaactgatt atgatatcaa aataaaaaaa tactttatca aacccatgtg
     2581 gatatcctca agagttccac cgaaccctta taccatacgg aacttaatcc caccgaaccc
     2641 gttccgatat cagtgctttt tagtggatcc tgcgaataca aggtgaaaac aaaaaatatt
     2701 gtcatcaata ataggaccgg aatcactgga agcagtaac
//
LOCUS       DASQJI010000763         5518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1648875,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000763 DASQJI010000000
VERSION     DASQJI010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5518
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648875"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VEV83_20305"
     CDS             <1..312
                     /locus_tag="VEV83_20305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47536.1"
                     /translation="RKDVHDAVIRNSVRILQQIKIPEALHGELMNYCFAFIESNSTPV
                     AIKAFALTTLFNLSTTYPEIRNELQLLIEERWNHETAAFKSRGGKILKELNAFCITDD
                     S"
     gene            complement(407..1513)
                     /locus_tag="VEV83_20310"
     CDS             complement(407..1513)
                     /locus_tag="VEV83_20310"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47537.1"
                     /translation="MKKMSRRSFLVNTSAATTAFALPSIASSVKGTRSYDGKKLNIAL
                     VGLGNYATILARGLLESQYCRLAGIVTGHPAKAEAWKKQYNIPDNSIYNYENFDSIAN
                     NTGIDVVYVVLPNSMHAEYTIRAAKAGKHVICEKPMATSVKDCEEMIRACKAANVQLA
                     IGYRLHYEPYNLEIKRLGQEKVFGQVRLIESSLGYKTGDPTEWRLHKALSGGGPLMNV
                     GIYCVQSARYCTGEEPVSVTAQFGPVTDRELFKEVEASIFWQLEFPSGAISNSSSMYN
                     CGVDRFFASADEGQFELSPGISYGPFQGKTSNGELHFPDINQQAAQMDGIGKLLLENK
                     PLPDHITGEEGLRDLKIMEAIYEAARTGKKVPLV"
     gene            1727..4924
                     /locus_tag="VEV83_20315"
     CDS             1727..4924
                     /locus_tag="VEV83_20315"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47538.1"
                     /translation="MKLLPPLVAVLFCLSAFSQEKSNPAAKNLNVYNDSLYNGLKWRC
                     IGPWRGGRSLAVTGVKGDLMTYYAGACGGGLWKTTDGGNTWNCISDGKIFHSSSVGAV
                     GVAQSDPNVVYAGMGEVEMRGNISFGDGVYKSIDAGKTWKHVGLEETNAIGTIVVHPQ
                     DPNLVYAAAQGKIWGPAPNKERGLFRSKDGGATWQKILYVDDTTGCADVKMDPTNPAI
                     LYASMWKAWRTPYSLSSGGKGSGLYKSTDGGDSWNLISENPGMPVGLKGKIICTVSPV
                     NHNKLWAIVENEQYGVYASQDGGDTWNRVSTMNDLTQRPWYFSQIFADTKSESTLYVL
                     NVEFFKSIDGGATWKAVPNQHGDNHDMWINPDDANNYIVGDDGGPQITFDNGKNFTKQ
                     HLPTAQFYHLNLDNDFPYNVYGPQQDNSSLKIKSRTAGVNISDKDWHPVAGGEAGYIV
                     PDPTNSDITYGGEYDGIMSTSNEKNDQYRFISVYPEQNYGIGAEKYKYRFQWTFPIAF
                     SPHNPKCLYATSNIVHRSLDGGQTWEDISPDLTRHDPKTLKPSGGPITLDITGTETYA
                     TVFAFAESPVTAGVLWAGSDDGLVHVSTDNGKTWNNVTPKNLPDWALISYVEPSHFDA
                     AVCYVSATRYKSGDNKPYILKTSDYGKSWTMITNGLDADVYNRCVREDPTHKGLLYAG
                     METGIMISFDDGAHWQSLQLNLPNTPVHDIQVAPREHDLVIATHGRSFWILDDITPLY
                     QISDAVAKANGWLFKPRDTYRFPGFNYEEESEDSHDGQNLPNGLLVRYYFKSKPDKEV
                     KLTFYTEGGDSIITYSSVKDNKGKLVPVPKEFHPNPKATASGLLKANAGVNQFVWDMR
                     YPSAKGDTSATFEASLLGPKLVPGNYKVKLFLGDGLVMEQPFNIITDPRNPATVSELR
                     EQFDLNKKICEELNELSKGTAQIKQVTEQINDFVATLTDSATAKSFKEKAKFITDTLD
                     AIKNELFNEKIQANEDNLRFPLKLEEKLATMNYLLQASDTRPTASMYVVYNSLSAQID
                     AQLRKLKNVIDTKIPEFNTMAAGLQKKAVDVKVSE"
BASE COUNT         1627 a         1195 c         1244 g         1452 t
ORIGIN      
        1 cggaaagatg tgcatgatgc ggtgatacga aacagcgttc gcatccttca gcaaattaaa
       61 atacccgaag cgctgcacgg cgaactcatg aattattgct ttgcatttat tgagtcaaac
      121 tccactcctg tcgcgataaa agcatttgct ctcaccacac ttttcaatct ttcaacaact
      181 tatcctgaga taagaaatga attgcaacta ctgatcgaag aaagatggaa tcacgaaacg
      241 gcagcgttca aaagccgcgg cggcaagatt ttaaaggagt tgaatgcttt ctgtataaca
      301 gatgacagtt gagagatccg agatccgaga tcaggatcat acatcacatc agagatcaga
      361 gatccgagat cagacatccg agatcagaca tccgagatcc gacatcctac acaagcggta
      421 ccttcttccc tgttcttgct gcttcataga tcgcttccat aattttcaaa tcccgcaagc
      481 cttcttcgcc ggtgatatga tctggcaacg gtttattttc cagtagcaac ttcccgatac
      541 cgtccatttg agcagcctgt tgattgatgt ccggaaaatg tagctcgcca ttgcttgtct
      601 ttccctggaa tgggccataa ctaatgccgg gacttaactc gaattgtcct tcatcggcag
      661 aagcaaaaaa acggtcaaca ccgcaattat acatactgga tgaattagat attgctccgc
      721 tcggaaattc gagctgccag aatatggaag cttccacttc tttgaataac tcacgatcag
      781 taacaggacc gaactgcgct gttacggaaa ccggttcttc gcctgtgcag taacgtgcgc
      841 tttgcacaca atagatgcct acgttcatca gcggtcctcc gcctgataat gctttatgca
      901 aacgccattc ggttgggtca ccggttttat agccaagcga agattctatt aatctcacct
      961 gcccaaaaac cttttcctgt cccagccgtt ttatttcaag attatatggt tcgtaatgca
     1021 aacggtaacc gatagctagc tgcacattag cagccttgca ggctcgtatc atttcttcac
     1081 aatctttcac gcttgttgcc attggctttt cacatatcac atgcttaccg gccttcgcag
     1141 ctctgatcgt gtattctgca tgcattgaat ttggcagcac cacatacact acgtcaatgc
     1201 cggtgttatt tgcaatcgaa tcaaagtttt cgtagttgta aatactgttg tctgggatgt
     1261 tgtattgctt cttccatgct tcggctttcg ccggatgacc cgttacaata cctgcaagcc
     1321 ggcaatactg cgactcaagt aatcccctgg caagtatagt ggcgtagttg cccagtccaa
     1381 ccaatgcaat gtttaatttc ttaccatcgt atgatcttgt gccttttacg gaagatgcaa
     1441 tcgaaggcaa ggcgaatgcc gtcgtcgcag cggacgtatt cactaaaaaa gaacggcgtg
     1501 acattttctt catacaattt atttgaactt aaacttagtt acacaatgtc taactatttt
     1561 caataagaag tatggatggt tttattgttg tataaatgag tgcgcaagca aaccgtgcga
     1621 ttacaatcag cataaaataa aaacgagcat taatttcata atttgctgct gcaaagagtt
     1681 cggggctttt aagcagttcg gaactctatt tataaaaatt ctctttatga aattactccc
     1741 accacttgtc gctgtactct tttgtttgtc tgctttctca caggaaaaaa gcaatcccgc
     1801 tgcgaaaaat ttaaatgttt ataatgacag cctgtacaac ggtttgaaat ggcgttgtat
     1861 tggtccttgg cgtggcggca gaagccttgc cgttacgggt gtgaagggcg acctgatgac
     1921 atactatgcc ggcgcatgcg gcggtggttt atggaaaaca accgatggtg gtaatacgtg
     1981 gaattgtata tcagacggaa aaatatttca cagctcatca gtgggtgcag tgggggtggc
     2041 gcaaagcgat ccaaacgttg tttatgcggg catgggtgaa gtagaaatgc gcggcaatat
     2101 ttcttttggc gatggtgttt acaaaagtat tgatgcaggt aaaacctgga agcatgttgg
     2161 actcgaagaa acgaatgcca tcggaactat cgtggtacat ccacaggatc caaaccttgt
     2221 gtatgccgca gcgcagggaa agatatgggg accggcaccg aataaagaaa gaggtttgtt
     2281 tcgcagtaaa gacggcggcg ctacgtggca gaaaatttta tacgtcgatg atacaactgg
     2341 ttgcgcggat gtgaaaatgg atcccacaaa cccagcgata ttatatgcca gcatgtggaa
     2401 ggcctggcgg acgccgtatt cgttgagcag tggcggcaaa gggagtggct tatataaatc
     2461 cactgacggc ggcgacagct ggaatttaat ttccgaaaat cccggcatgc ctgtcggttt
     2521 aaaaggaaaa attatttgca ctgtctcacc agtcaatcat aacaaattgt gggcaattgt
     2581 tgagaacgaa caatatggtg tatatgcgag ccaggatggt ggtgatacat ggaatcgtgt
     2641 aagcacgatg aatgatctta cgcaacgccc atggtacttc agccaaatat ttgctgacac
     2701 taaaagcgag agcactttgt atgtgttgaa cgttgaattt tttaaaagca ttgatggcgg
     2761 agcaacctgg aaggcggtgc ctaatcagca cggcgataac cacgatatgt ggatcaatcc
     2821 tgacgatgca aacaattata tcgtgggcga cgacggcggg ccgcaaatta cttttgataa
     2881 cggaaaaaat tttacgaagc aacatttacc aactgctcaa ttctatcacc taaatctcga
     2941 taacgatttt ccttataatg tttacggtcc gcaacaagac aacagcagcc tcaaaataaa
     3001 aagcaggacc gcaggtgtaa atatttctga taaagactgg cacccggttg cgggtggtga
     3061 agcaggctat atcgttccag atccaacaaa ttccgacatc acttacggcg gggagtatga
     3121 tggaatcatg agtacatcga atgaaaaaaa tgatcaatat cgattcattt ccgtttatcc
     3181 tgaacagaat tatggaatcg gtgctgaaaa atataaatac cgttttcaat ggacattccc
     3241 gatcgctttc tcccctcaca atccaaaatg tttatacgcg acttcaaaca ttgttcaccg
     3301 gagtttagat ggcgggcaaa cctgggaaga cattagtcct gacttaacgc ggcatgatcc
     3361 aaaaaccttg aagccaagcg gtgggccaat aacgcttgac atcaccggga cagaaacgta
     3421 tgcgactgtt tttgcttttg ctgaaagccc ggttaccgca ggtgttttat gggcgggtag
     3481 cgacgatgga cttgtgcatg taagcaccga caatggaaaa acatggaata atgtaacgcc
     3541 gaaaaatctt cccgactggg cgttgatcag ctatgtagag ccttcacatt ttgacgccgc
     3601 tgtttgttac gtctcagcaa cgcgctataa aagcggggac aataagcctt acattttgaa
     3661 aacgtcagac tatggtaagt cgtggacgat gatcactaat gggctcgatg cggatgtgta
     3721 caatcgttgc gtgcgcgaag atccaacgca taaaggtttg ttatatgccg gtatggaaac
     3781 agggattatg atatcatttg atgatggtgc acactggcaa agcctccaac tgaatttacc
     3841 gaacacgccc gtgcatgaca ttcaagttgc gccacgggaa catgatctcg tgattgccac
     3901 gcatggcaga agtttttgga tcttggatga cattacaccg ctttaccaga tcagcgatgc
     3961 agtggcaaaa gcgaatgggt ggttatttaa gccacgagat acatatcgct ttcccgggtt
     4021 taattacgaa gaggaatccg aggattcgca tgatgggcag aacttaccga acggcctcct
     4081 ggtgcgttat tatttcaaat caaaacccga caaagaagtt aaactgactt tttatacgga
     4141 aggcggtgat agcatcatca cttattcgag cgtgaaagac aacaaaggga aattggtgcc
     4201 ggtgccgaaa gaatttcatc cgaatccgaa ggccactgct tcaggattgc tgaaggcaaa
     4261 cgccggcgtc aaccagtttg tttgggatat gcgttatcct tctgcgaagg gagatacaag
     4321 tgcaacgttt gaagcatcgt tgcttgggcc aaaacttgtt ccgggtaatt acaaggtgaa
     4381 gctgtttttg ggcgatggcc tggtaatgga acaaccattt aacatcatca cagatccgcg
     4441 taatcctgca acagtgagtg agctgcgcga acaatttgac ctcaataaaa aaatttgtga
     4501 ggagttgaat gagctgtcaa aaggcaccgc tcaaataaaa caggtgactg agcagataaa
     4561 tgattttgtt gctacgctta cagattccgc aactgcaaag tcatttaaag aaaaagcaaa
     4621 attcatcaca gatacgctgg acgctataaa aaacgaatta ttcaatgaaa agatacaagc
     4681 caacgaagac aatctccgtt ttccgctgaa gctcgaagaa aaacttgcga cgatgaatta
     4741 tttattgcag gcatcagaca ctcgtccaac ggcgagcatg tatgtcgtat ataatagttt
     4801 gtcggctcaa atagacgcgc agttgcgaaa acttaaaaac gtcatcgaca caaaaattcc
     4861 tgaattcaat actatggcgg cgggcctgca gaaaaaggca gttgacgtga aggtgagtga
     4921 gtgatttatg gatgaaaaaa ttttcaatga tcaaatattc aattttcaat gcgcaacaat
     4981 cagtaacgtt gttcccattg agaattgagc gttgaaaatt gaacattgaa aattcaattg
     5041 attcggcatt cacctcccgt tccctcacaa ctcacaactg accactcaca actcaccatt
     5101 gaccatcgct tccggctcgc ctttgaagtg cagcagcgta tcctgaaagg gacgaagctc
     5161 tctaaataac gcatcgtcaa ctgcgaaaga ggatgccagg caaaaagttc aaaatataag
     5221 gtgaataagg ttgcaaaaat aggcagcgct tctactaagg tttataaggt cgcaaaggtt
     5281 cgtttttgaa aagcagtgac cgcgatgtga aaatatttta ctttttaatg ctcaataact
     5341 actaacgttg ttctcattga gaattgagcg ttgaaaattg agcattgaaa attcaaatca
     5401 tttagcattc cgcgttagca attcactcac cattcaccat taaccatcac ttccggctcg
     5461 tctgccggta acttcttcgt acaaactttg tatcagccca tctgccaaac cgatcttc
//
LOCUS       DASQJI010000764         2023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_728294,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000764 DASQJI010000000
VERSION     DASQJI010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728294"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2005
                     /locus_tag="VEV83_20320"
     CDS             <1..2005
                     /locus_tag="VEV83_20320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HYK47539.1"
                     /translation="WNNAKGFVDGLKRVRVAVSFNPKNDETTQLCKYVIPDHHYLESW
                     GDAEPKSGFVSLMQPTINPLFKTRQWQDSLLKWSGAATDYHTFFKTYWVGKAGNELAF
                     DKALQDGVVNNGSFSAVSASPVINNPTGPSDTARASVANSPGNQPPNGVPATVPNASP
                     ANGVATGSVASAISAINGANKSSGTELVLYKKVGIGTGEGSGNPWLQELPDPVSRATW
                     DNYVMISPSMAKSLLGIDIMNQQEADAYEVHPAKKVVKVTVNGKGSVSLPILIIPGVH
                     PNTVGIALGYGRTDKLGKVAAGVGQNVFPFTSFNGNSVVLSVTDVTVEKTGDTYDVGQ
                     IQTHNIYTTVTGSRQDVMKELTLAHFKKEPDEIIDDRERETTPYGGLPAFEKQGTIYP
                     YYDKPGIHWGMSVDLNSCIGCGACVVACHMENNVPIVGKSEVKRFHDMHWLRIDRYYS
                     GDMDNPQVVFQPMLCQHCDNAPCENVCPVSATNHSSEGINQMAYNRCIGTKYCANNCP
                     YKVRRFNWADYNGADSFPDNQDFGGVGKLDPAVHVMNEDLTRMVLNPDVTVRARGVME
                     KCTFCVQRCQEGKLQAKKESRPLKSGENNEWDVQTACQQACPTNAIVFGNANDKNSGV
                     TQMRVNNKLRLFHSLEQLHTLPNVNYLAKVRNRDEEITNIKEG"
BASE COUNT          597 a          441 c          518 g          467 t
ORIGIN      
        1 atggaataac gcgaagggat ttgttgatgg cttaaaaaga gttagggtag ctgtttcatt
       61 caatccaaaa aatgatgaaa cgacacagct ttgcaagtac gtgatccctg atcatcatta
      121 ccttgaaagc tggggcgatg cagaaccaaa atcggggttt gtgtcgttga tgcaaccaac
      181 tatcaacccc ctattcaaaa caaggcagtg gcaggatagt ctattaaagt ggagtggtgc
      241 tgcaactgat tatcatactt tctttaaaac ttattgggta ggaaaagcag gcaatgagtt
      301 agctttcgat aaagcattgc aggatggcgt cgtcaataat ggcagttttt cagcagtaag
      361 tgcttcaccc gtaataaata atccaaccgg accgtctgac actgcacgtg cgtctgtggc
      421 aaacagcccg ggcaatcaac cgccaaacgg cgttccggct acagtgccaa atgcttcgcc
      481 ggccaatgga gttgctactg gctccgtagc aagtgcgatc agtgctatca acggtgcaaa
      541 taaatccagc ggtactgaac ttgtgttgta taaaaaagtt ggaatcggca cgggtgaagg
      601 ctcaggcaat ccatggctgc aggaattacc ggatcctgtt tcaagggcca catgggataa
      661 ttacgtaatg atctcgccgt cgatggcaaa aagcctgctc ggtatcgaca ttatgaatca
      721 gcaggaagca gatgcttatg aagttcaccc tgcaaaaaag gtagtcaaag taaccgttaa
      781 tggaaagggc tcagtgtctc ttcctatatt aataatccct ggtgttcatc caaacactgt
      841 cggcattgca cttggctatg gccgcaccga taaattagga aaagtggctg ccggtgttgg
      901 acagaacgta ttcccgttca cttcatttaa cggaaacagc gttgtcctct ctgttactga
      961 cgttaccgtc gaaaagacgg gcgacactta tgatgtcggc cagatacaga cacacaatat
     1021 ttatacaaca gttacaggaa gccggcagga cgtgatgaaa gaacttacgc ttgcccattt
     1081 caaaaaggag cccgacgaaa taattgatga cagggagcgc gagacgacgc catacggtgg
     1141 cctcccggct tttgaaaaac agggaacgat ctatccgtat tacgacaagc ccggcattca
     1201 ctggggcatg agtgtggacc tgaacagttg catcggttgc ggtgcatgcg tagtggcctg
     1261 ccacatggaa aataatgttc cgatcgttgg caagagcgag gtcaaacgct tccacgacat
     1321 gcactggtta cgcattgacc ggtattacag cggcgacatg gataatccac aggtcgtatt
     1381 tcagcccatg ctttgccagc actgcgataa cgcaccctgc gaaaatgttt gcccggtgag
     1441 cgcaacgaat cacagcagtg aagggataaa tcaaatggcg tataaccgct gcattggtac
     1501 aaaatattgc gcgaataatt gtccgtacaa agtccgccgg ttcaactggg ccgattataa
     1561 tggggcggat agttttcccg ataaccagga ttttggtggc gtcggaaaac ttgaccctgc
     1621 tgttcacgtg atgaatgaag atcttaccag aatggtgttg aatcccgatg ttaccgtgcg
     1681 ggcgcgcggc gtgatggaga aatgtacttt ctgcgttcag cgttgccagg agggtaagct
     1741 acaggcgaaa aaggaaagcc gtccacttaa gagcggagaa aataatgagt gggatgtaca
     1801 aactgcttgt cagcaggcgt gtccaacaaa cgcgatagta tttggaaatg cgaacgataa
     1861 aaacagcggt gttacacaga tgcgtgtaaa taacaagctc agactgtttc attcactcga
     1921 acaactacat actttgccta acgtgaatta cctggcaaaa gttcggaacc gggacgaaga
     1981 gataacgaat attaaagaag gataaccagg aagcaaagga aaa
//
LOCUS       DASQJI010000765         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1804811,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000765 DASQJI010000000
VERSION     DASQJI010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804811"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..>1578)
                     /locus_tag="VEV83_20325"
     CDS             complement(121..>1578)
                     /locus_tag="VEV83_20325"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HYK47540.1"
                     /translation="SMNNELLNHGLNINRRRFLSRLSIGVGSVALGSLLIPGLFTGSD
                     EDETDFLPGVPNFAPHAKRVIYLFQNGAPSQLESFDHKPLLTKMMGQDLPASIRMGQR
                     LTGMTAQQKKFPLVGSFYKFNQYGNSGAWVSELFPETAKIVDDICIIKSMHTEAINHD
                     PALTFFQTGAQQGNRPSMGSWVSYGLGTENKNLPSFCVLLSRGKGNGQGVYSKLWSNG
                     FLDSVYQGVQFSSGENPILYLQDPDGMDRTQRRHMLDKIAELNEIELKNFGDPEIGAK
                     IQQYEMAYRMQTAVPEIMDVSKEPDDIVKLYGSDCLVPGTFAANCLLARKLSENGVRF
                     VQLYHQGWDQHGNLPNEMKGQAKDVDQASAALITDLKQRGLLDETLVIWGGEFGRTNY
                     CQGEMTPDNYGRDHHPRCFSIWMAGGGIKPGMVYGETDDFGYNITSNPVHVHDLQATI
                     LNRLGLDHEKLTYRYQGRRFRLTDVEGKVVRDILT"
BASE COUNT          407 a          403 c          341 g          427 t
ORIGIN      
        1 gcgacgcaac gaaagtttaa tagtagcaat gtagccgggc tcataaaaat tatcaagctg
       61 cgagcctcga gcggcgagct acgagcaggc tcgaagctcg tggctcatag ctcgcggctc
      121 ctacgttaaa atatctctca ctacttttcc ttccacgtca gttaacctga aacggcggcc
      181 ctggtaacga taggtaagtt tctcgtgatc caggccgagg cgattcagaa ttgtcgcctg
      241 caggtcatgc acgtgcacag gattgctcgt gatgttgtaa ccaaaatcat cagtctctcc
      301 atataccatt cccggcttta ttccaccacc tgccatccag atggaaaaac atctcggatg
      361 atgatctctt ccgtaattat cgggcgtcat ttctccctgg caataatttg ttcgcccaaa
      421 ctcgccgccc cagatcacca gtgtttcgtc aagcaaaccg cgttgtttta gatcagtgat
      481 cagtgcagca gaagcctggt caacatcttt cgcctgtcct ttcatttcgt ttggaagatt
      541 accatgctga tcccatccct ggtgatataa ctggacaaac cgcactccat tttcagaaag
      601 ttttcgcgcc agcaaacaat ttgcagcaaa agtgccgggc accaaacagt cggagccgta
      661 caactttaca atatcgtcgg gctcttttga aacgtccatg atttcaggaa cggcagtttg
      721 catgcgatat gccatttcat actgctggat cttggcgcca atttcaggat cgccaaaatt
      781 cttcaactcg atttcattta gttccgcaat tttatcgagc atgtggcggc gctgtgttct
      841 gtccattcca tcaggatcct gcagatacaa aatcggattt tcgccgctgc tgaattgtac
      901 accctggtac acggaatcta aaaatccatt cgaccacaat tttgagtaca cgccttgtcc
      961 gtttcctttg ccgcgcgaca acaacacaca aaaggatggc agatttttat tctctgtccc
     1021 tagtccataa ctcacccatg aacccatgct tggacgattg ccctgctgtg cacctgtttg
     1081 aaaaaatgtg agtgccgggt catgattgat cgcttccgta tgcattgatt tgatgatgca
     1141 gatgtcatca acaatttttg ctgtttcagg aaacagctcg ctcacccatg cacctgaatt
     1201 tccatactga ttgaatttgt agaacgaacc gactaacgga aatttttttt gctgcgccgt
     1261 cattcctgtt aaacgttggc ccatacgaat ggaagcaggg aggtcctggc ccatcatttt
     1321 tgttagcaag ggcttatgat caaatgactc gagctgcgag ggtgcaccat tttgaaaaag
     1381 ataaataacg cgtttcgcat gcggagcaaa attgggaaca ccgggcaaga agtctgtctc
     1441 atcttcgtct gaacccgtga ataagccagg aatcagcaaa gatcccaatg caacactgcc
     1501 aacaccaatg ctcaaacggg aaagaaaacg cctgcggttt atgttgagcc cgtggtttaa
     1561 taattcgttg ttcatgct
//
LOCUS       DASQJI010000766         3927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_422513,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000766 DASQJI010000000
VERSION     DASQJI010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3927
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422513"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VEV83_20330"
     CDS             <1..432
                     /locus_tag="VEV83_20330"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYK47541.1"
                     /translation="FYAVSEKLKAQSLPASPSRSFERSEAGQAGSKSDAEAARYVPQV
                     TLVTKKVNDKIQIIVKDNGTGIPQNIVDKIFQPFFTTKPTGDGTGLGLSLSYDIIKAH
                     GGEIKLETNAGEGLPGKASAKAGKEDEGTEFIIQLPLLFRS"
     gene            507..1997
                     /locus_tag="VEV83_20335"
     CDS             507..1997
                     /locus_tag="VEV83_20335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HYK47542.1"
                     /translation="MESIALAPISKEETDKHPKEMYRVAFTSMWDMFSFYGMKALLIA
                     YIVTQLRLGQPMGYAILGTYAALVFGFNFFGGMVADKFLGTRKAIIWGGYLQITGHLI
                     LAIPSDLPFFAGLALVATGAGFRNGPSGSFVGSFYSNDKSRKKDSGYALYYMIFNMGA
                     ALGGLICGYLGQNINWHLGFGAACIFMIIGQAQFMAGINNSHGLPPDIKKLKEKVFIK
                     LLDRETIIYLLSLVVVAMVTLLLQFPGFMNVIMLPLTIIAFLYIIVVSFRFSKNERWK
                     LFAAMTICLITSLFWAFYEQIGGSLSLFSLHNVNLNLYGAKLSGLSINSFTPSAWLVV
                     LTPISIRLWKWLDSKNANPRSYIKLMLSFMFMSFCFLLLWLGSFLNKGTGMLPVSYLI
                     AAYLLMEMGEICIGPVVYSLVSKLSPTKIASTLMGIMFLSISLGEYLSGKLGAFMTVP
                     EGVSSSIEMMPYFSSVFIKIGAGSLLIAALIAILIPVLRKWMQEVR"
     gene            2054..>3927
                     /locus_tag="VEV83_20340"
     CDS             2054..>3927
                     /locus_tag="VEV83_20340"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47543.1"
                     /translation="MRSLKNLLSLLFSPVFVTAQFQHDQLDSMHMVLQHATNDTIRMD
                     ACLKFGSYYDDVNLDSSVYYSEKGILIAKQLQLKLNEAEMLTNMSWPLVKMGNYPRSL
                     KVLDEALEIAGDPSNEKNTWHLLKGQTPRSYRIDLLGNVHSAFDYLYGYTGNYAKQIT
                     EAYEGIRLFESVSDTLLQAYTYTDIGNAYIKLNKLDSALYFEQKALRYYSAIPFKERK
                     YEAEAHSQIGQIYLQMGNIDLARENFEKAIRISEQQNNPAKQGDAHLQLASLYQSLSK
                     TDSCLFHAQKAVQAFSLVGKEKSKAAAYRKISDYYWDQNKPDSSFRYLRLATILNDSV
                     DKIEKEKLREFQLEGFNEALRLKELEKENIQTQSKIRTYVMLAGIAVFMLIAFLLYRN
                     NRNRKKANTVLQKQKEEVQSTLGELKATQAQLIQSEKMASLGELTAGIAHEIQNPLNF
                     VNNFSEVNGELISELVDEVDKGNYDEVKVIAVSIKDNEEKIKSHGQRADAIVKGMLQH
                     TRKSAGQTQPTDINALCEEYMRLSFHGLRAKDKDFNAQLETNFDGSIGKINVVPQDIG
                     RVLLNLYNNAFYAVSQKLAAQGSKLEANNKCYVPTVTIVTKKISDKILISVRDNGAGI
                     P"
BASE COUNT         1220 a          767 c          866 g         1074 t
ORIGIN      
        1 ttctacgctg taagcgaaaa gctgaaagct caaagcctgc ctgcatcgcc ttcgcgtagc
       61 ttcgagcgga gcgaggccgg acaggcaggc tcaaagtccg atgctgaagc cgcccgttac
      121 gtcccacaag tcacacttgt cacaaaaaaa gtaaatgata aaattcaaat aatcgtaaag
      181 gataacggaa caggcattcc tcaaaacatc gttgacaaga tctttcaacc attcttcacc
      241 acaaaaccaa ccggcgatgg aacaggattg ggcttaagct tgagttatga tattataaaa
      301 gcgcatggag gtgaaataaa actggaaaca aatgcaggag aaggcttgcc cggcaaagct
      361 tcggcgaagg caggaaagga agatgaggga accgagttta ttattcaatt acctcttctc
      421 ttcagaagtt aataacggga aagacaattt atcattctat cttacccccc aggctgaacg
      481 taccaatacc aaaacaaaca ctgaatatgg aatccattgc cctggcacca atatcaaagg
      541 aggagaccga caagcaccct aaagaaatgt accgggtagc attcactagc atgtgggata
      601 tgttttcatt ttacggaatg aaggcattgc tgatagctta tatcgttaca caactgcgac
      661 tcggacaacc gatggggtac gctattttgg gaacttatgc ggcattggtt tttggtttca
      721 attttttcgg gggcatggtg gcagataaat ttttaggaac gcgaaaagca attatttggg
      781 gtggctatct gcagataacc ggtcatctca tactcgctat tccatccgat ctgccttttt
      841 ttgctggcct tgcgctggta gctaccggtg caggtttcag gaacggcccg agcggttcat
      901 ttgttggaag cttttacagc aacgataaat caagaaaaaa agatagcggg tatgccctgt
      961 actatatgat ctttaatatg ggcgcagcac tcggcgggct gatctgtggt tatcttggac
     1021 aaaatattaa ctggcacctt ggctttggcg ctgcctgtat ttttatgatc attgggcagg
     1081 cgcaatttat ggcgggcatt aataattcgc atggactacc gcccgatata aaaaaattaa
     1141 aggaaaaggt ctttataaaa ctattagacc gggaaaccat catttatctt ttaagcctgg
     1201 ttgtagtggc catggtaacc ttattgcttc aatttccggg tttcatgaat gtcataatgc
     1261 tgccattaac cattattgcc ttcctttata tcatcgttgt ttctttcaga ttttcaaaga
     1321 acgagcgatg gaagttattt gcagcaatga cgatctgcct gatcacttct ttattctggg
     1381 cgttttatga acaaatcggt ggttctctaa gcctgttttc attacacaat gtaaacctta
     1441 acctgtacgg tgcgaagctt tccgggttat ccattaacag cttcacgccc tcggcctggc
     1501 ttgtagtgct cactccgatc tccataagac tctggaaatg gctcgatagt aaaaacgcca
     1561 atccaaggtc atacatcaaa ctgatgctat cgtttatgtt tatgtctttt tgttttttgc
     1621 ttttatggtt aggatcattt ttgaataaag gcaccggtat gctaccggtt agctatttga
     1681 tagcagcgta tcttttaatg gagatgggtg aaatatgtat cggcccggtg gtgtattcac
     1741 ttgtttctaa attgtcccca acaaaaattg cgagtacttt aatgggaata atgtttttat
     1801 caatttctct cggagaatac ctctccggta aactcggcgc ctttatgacg gtgcctgaag
     1861 gtgtttcgag ttccatagaa atgatgccat atttcagttc ggtgtttatt aaaataggtg
     1921 cgggttccct attgatcgct gcgctaattg cgattttaat tcctgtgtta agaaagtgga
     1981 tgcaagaggt gaggtgaaga gaaaaaataa aaatcatgag ctgtaattca atgaagaagg
     2041 ataaaatcac tacatgagat cattaaagaa tttactctcg cttttgttct cacctgtttt
     2101 tgttactgca cagtttcagc acgaccaatt agacagcatg cacatggtgc tccagcatgc
     2161 aacaaatgat acgatccgta tggatgcctg tttgaaattc ggttcttatt atgatgacgt
     2221 gaaccttgac agttccgtgt attattctga aaaaggaata ctcattgcca aacagctcca
     2281 attaaaattg aatgaggcgg agatgttaac caatatgagt tggccattgg tgaaaatggg
     2341 caattacccc cgatctctta aagtgctgga cgaggcattg gaaattgcag gtgacccttc
     2401 taatgaaaaa aatacctggc acttattaaa aggacaaacg ccgcgatcat acagaattga
     2461 tctgctaggt aatgttcatt ctgcttttga ctatttatat ggatatactg gtaattatgc
     2521 gaaacagatc actgaagcat atgagggaat aaggcttttc gaatccgtca gtgacacatt
     2581 gttacaggcg tacacgtata ccgatatagg caatgcttat atcaaattaa ataaattaga
     2641 ttcagcgctt tattttgaac agaaagcatt gcgctattat tcggcaatac catttaagga
     2701 gagaaaatac gaggcagagg cgcattcgca aattggtcaa atctatctgc aaatgggaaa
     2761 tattgatttg gccagggaaa attttgaaaa agccattcgg ataagtgagc agcagaataa
     2821 tcctgccaaa caaggagatg cgcaccttca attagccagt ctctaccaat cgttaagcaa
     2881 aacagattca tgcctttttc atgctcaaaa agctgtgcaa gctttcagcc tggttggtaa
     2941 ggaaaagtca aaggcggctg cttaccggaa gatatcggat tattattggg atcaaaataa
     3001 accagacagt tcttttaggt atttaagatt agcgacgata ttaaatgaca gtgtagacaa
     3061 gatagaaaag gagaaattgc gggaatttca gcttgaagga tttaacgagg cattgcgttt
     3121 gaaagaactg gaaaaagaaa acattcaaac gcaatcaaag atcaggactt atgtaatgct
     3181 tgctggcatt gcagttttta tgctgatagc attcctgctc tacagaaaca accgcaaccg
     3241 caagaaagca aacaccgttt tgcaaaaaca aaaagaagaa gttcagtcaa ctttaggtga
     3301 attaaaagcc acccaggcac agctcattca atcagaaaaa atggcctcgc ttggagagct
     3361 tactgcaggc attgcgcatg agatacaaaa ccctttaaac ttcgtaaaca atttttcaga
     3421 agtgaatgga gaattgataa gtgaactggt tgacgaagtt gacaagggaa attatgacga
     3481 agtgaaagtc attgcggtca gcataaaaga caatgaagaa aaaataaagt ctcacgggca
     3541 acgtgcggat gcgatcgtga aaggcatgct acagcacacg cgaaaaagcg caggacaaac
     3601 gcaaccgacc gatattaatg ctttgtgtga ggaatatatg cgcctgtctt ttcatggctt
     3661 gcgtgcaaag gataaagatt tcaatgccca gctcgaaaca aatttcgatg gcagcattgg
     3721 aaagatcaac gtcgttccgc aggatattgg aagagtgcta ttgaatttat acaacaatgc
     3781 attttacgcc gtaagccaaa agctcgcggc tcaaggctca aagctcgagg ctaataataa
     3841 gtgctacgtc cccaccgtca caattgtcac aaagaaaata agcgacaaaa tattaatttc
     3901 tgttagagac aacggcgccg gcattcc
//
LOCUS       DASQJI010000767         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3032324,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000767 DASQJI010000000
VERSION     DASQJI010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032324"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..844
                     /locus_tag="VEV83_20345"
     CDS             314..844
                     /locus_tag="VEV83_20345"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HYK47544.1"
                     /translation="MKNLFYIFAIAVTAVCCNTATNSGGGTNTEANKARVQAFYDQVI
                     NAHNVDAIDSFCNADFVDHNPDPGHSGKGIDDLKASFKEFFAGFPDIHAGTDFMVAEG
                     DTVVAHLTMTGTNSGPMGGMPATNKQSKVDLIDIIVLKDGKASERWGIFDARSMMQQL
                     GIMPQQGMAQDTTKKK"
     gene            1204..>1806
                     /locus_tag="VEV83_20350"
     CDS             1204..>1806
                     /locus_tag="VEV83_20350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HYK47545.1"
                     /translation="MLVKTFGSAVYGVEAITITTEVNVSAGQHYTIVGLPDNAVKESL
                     QRLESAIKTNDYYMPRIKIVVNLAPADIKKSGSSFDLPIAIGVLGASEQIEEPERLSQ
                     YVMMGELSLDGTVQPIKGALPIAIQARKEGFKGLIVPKANAREAGMVNNLDVYGVTHM
                     NEVVEFFKNENSLKPVVVNTREEFFDSQQQFDVDFNDVKGQ"
BASE COUNT          549 a          368 c          408 g          481 t
ORIGIN      
        1 aacctccata taatttattg aacacacgtc ttggcttcag ttcaaaacac ggggacttgt
       61 ttttctgggg aagaaacctg gcagataagg cctatatagc ttacgcctat gacttcggcg
      121 gcgtgcacct ggcagaccca agaacatatg gagtcacctt gacattgagg ttatagcttt
      181 tttgaactct tattagatga atgaagcata acggtctgac gctttggaag cgtctgaccg
      241 attttaatat ctggcacctt agattattct ttttacattt aatgcccatt ttctcactta
      301 aagcaaaatc aaaatgaaaa atctgtttta catttttgct attgcggtaa ccgccgtatg
      361 ctgcaataca gcaactaatt cgggcggagg tacaaacact gaagcgaata aggcaagagt
      421 ccaggccttt tacgaccagg tgatcaatgc gcacaacgta gacgccatcg attctttttg
      481 caatgcggat tttgttgatc ataatcccga ccccggacat tcaggcaaag gcatcgacga
      541 cctcaaagca agcttcaaag aattctttgc cggtttcccc gacattcatg cgggaaccga
      601 tttcatggta gcggagggcg atacggtggt ggctcacctt actatgactg gcactaattc
      661 tggaccgatg ggcggcatgc ctgcaacgaa caaacagtcg aaagtcgact taatagatat
      721 tattgtgttg aaagatggta aagccagtga acgatggggc attttcgatg cccgctcaat
      781 gatgcagcaa ctgggtataa tgccgcaaca aggcatggcg caggatacca caaagaaaaa
      841 atgattttaa catcggcaca ccttattaaa aaagttctgc ggtaatgcgg aacttttttg
      901 actaaatgcg atagtcagga tgtttagtct cagtttgaac cacattagga cacaagccac
      961 attagaaaac acatagacta atagactacg tgaaaatcta tgtagactat tgtgcctatg
     1021 tggttcaatt ctcgattgat atttttttgt ataaatggaa ttgaaacagt agcagatgta
     1081 aggcgattct ttctttgaaa acaacttttt tatttagctt agtcctaaat ttgaaattgc
     1141 ttttcgaacc ctgaacaata ttggcctgaa acaaaaactg ctttacagcc acaaactaaa
     1201 cccatgctcg tcaaaacttt tggaagtgca gtctacggag tagaagccat taccatcacc
     1261 acagaagtta atgtaagtgc aggacagcac tatacgatcg ttggcttgcc cgacaacgct
     1321 gtaaaagaaa gtttacagcg actcgagagc gcgatcaaga caaacgatta ctacatgccg
     1381 cgtattaaga tcgtcgtgaa tcttgctccg gcagatatta aaaagagcgg atcttctttt
     1441 gatcttccga ttgcgatcgg tgtactcggc gcgagcgaac agatcgaaga gcccgaacgg
     1501 ttgagccaat atgtaatgat gggcgaatta agtttggatg gaacggttca gccgataaag
     1561 ggcgcattac cgattgcaat acaggccagg aaagaaggat tcaaaggact tattgttcct
     1621 aaagcaaatg cgcgtgaggc gggcatggtg aacaacctcg atgtatacgg cgtcacgcat
     1681 atgaatgaag tggttgaatt ttttaaaaat gaaaattcgc ttaagccagt cgtcgtaaat
     1741 acgcgcgaag agttttttga ttcacagcag cagttcgatg tcgatttcaa tgatgtgaaa
     1801 ggacag
//
LOCUS       DASQJI010000768         5088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1341683,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000768 DASQJI010000000
VERSION     DASQJI010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5088
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1341683"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VEV83_20355"
     CDS             complement(<1..181)
                     /locus_tag="VEV83_20355"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK47546.1"
                     /translation="MKKILLPVAILLCGYSFAQVQLPQPSPTATVAQNFGLGKITLVY
                     SRPSIKGRTLFADNSD"
     gene            891..3299
                     /locus_tag="VEV83_20360"
     CDS             891..3299
                     /locus_tag="VEV83_20360"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47547.1"
                     /translation="MLKNYFTIAIRNLWKNKVLSFINIFGLAAGMACSLLIFLFVTDE
                     LSYDRFNKDADRVYRVVKDFVNDDGSKLPDATTPPAIAPAIQKEIPGIEHVTRVFPGW
                     GNNFLFTYKDKHIYEQKLYRVDSSFFDVFTFPFVEGAAKNAFKEVNSVVITQTTAKKY
                     FGAEDPMGKILHEGRLGDLIVTGVVKDVPHNAHFHFDFLIPIRKLAGDIDGNWGFYNF
                     YTYIKLRPNVNIKSVESSIQAIYKRNSENGKNIFYTQPLTGIHLDSNLKWELEPNSER
                     LYVFVFSAVALLILLIAAINYINLVTARSSLRAKEVGIRKVSGAYKSSLIKQFLLESV
                     VTCMLASAVALIIAQLLLPVVNSITQKQLSLFSSDNYFTIYFLGAALLIGVVAGLAPA
                     LYLSSFKPIVVLKGSKMNERNVFNLRKALVVIQFTISISLIAGACIIYQQVNYIQNAK
                     LGLNKDQVLLIRDYGAVSPPTANSFENALLQIPGVKDAATADGVVGGQNWTNSMSLKG
                     SKNSQLINFLSVGYDYLDVLGIQIKEGRNFSRDFPADTISYVSNHQLNEDIGSIILNE
                     KAVKDLGVPSPAVGQRILWSNDGDTNYYCKIIGVAKDFHFASFRSEIKPFAFVVIPRR
                     TDYLTIKLSTQNLPATIQKIESTWKAFVPDRPIQYSFLDETFAELYRSEANFQQVFIV
                     LVILSIVIACLGLFGLAAFTAEQRTKEIGIRKVLGATVTGIAAMLTKDFLKLVVISIL
                     VASPLAYWAMSKWLQDYAYRIQISWWVFFIAGVMAVIIAVMTISFQAIKAAVANPVRS
                     LRTE"
     gene            3406..>5088
                     /locus_tag="VEV83_20365"
     CDS             3406..>5088
                     /locus_tag="VEV83_20365"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47548.1"
                     /translation="MFENYLKSAWRNIKRSKGFFALNFIGLYISIAVCLLIGLIILHE
                     TSFDRSTNKNLVIYRVVKSATRSTGKTYSAITPYPLAAALRATTSMKLISQIHFQRED
                     VISFDNKKFKEENIVFADSVFPRLFPLTVKQGSIGRALTEPGFAIVTEETAHKFFGNE
                     NPIGKRVKIANLVDLQVAAVIANAPANSHLQYNMLISYPSLKPEFIGGFPLDQWGLNS
                     AGYTYIGLPDENQTGHVNAALASIANENLNNKKDGTITNFNLQPLPDIHYNQLYAGGN
                     PSYTINYSYLYLIGAIGLFLILAACINYTNLSTALAIRKSKEVGVRKTMGATREHLLR
                     QFLSETFVLTAFVFIAAALSVRFFLPPLNNFLDKNIPLNWLHVNSALFLIGLWILVSL
                     LSGLYPAFVLSGFNPVAALKNKGITPKASVVTLRKGLVVFQFLTAQILLIGAIVVAKQ
                     MNFIQSRPLGFTTNNVVDINLPENKHEQLKLLSDKLSAIPGVTGVSFSLGAPVADNNA
                     STSFNRKEKYASEKIDVEVKAADKNYLSTYGLQLTAGRWFDDNDEHSVNDAIP"
BASE COUNT         1484 a         1071 c         1131 g         1402 t
ORIGIN      
        1 ggtcgctgtt atcggcaaat aacgtccgtc ccttgatcga aggacgtgaa tatacaagcg
       61 taatttttcc aagcccaaag ttttgagcca ctgtagcggt cggactcggc tgtggcaatt
      121 gaacctgggc gaatgaataa ccacataata aaattgcaac tggtaataat atttttttca
      181 tggcaataat gttagagtgc gaatataatt gtgaattggt gaattgtcaa ttgtcaattg
      241 tgaaacttca gacgcttaaa ctttaacgca aaggcgcggc tgaatagagg aataaaccaa
      301 tgtaattgtg aattgtcaat tgtgaattat gaaacttcag gcgccaaaac tcaatgcaaa
      361 tgcttgatcc gccaatagac gaataaacca ataaaccgta actggtgaat tgtcaattgt
      421 caattgtgaa acttcagacg cttaaacttt aacgcaaagg cgcggctgat caatagagga
      481 ataaaccaat ataattgtga attgtcaatt gtgaattatg aaaggtgaga cgctcaacct
      541 tcaacgtgaa gacgcgatca tgaatcgacg aaaccaatag cccaataaac caataaccca
      601 ataaaccaac ctccacctca aacctcaaac cccaaacctc aaacttcaac ccgtacgcca
      661 ccgcacaaag actgttcggt ttcgtacagt cggttgcctg ccaatctttt gaaaccctta
      721 tctacaaagg atttgaacat tggcatacgc gttgaaaccc aatatttccg tgagcccgaa
      781 gtgtgtctga gagggtcagc gggaataatg agtgatgagg taatcagggg ttaggaataa
      841 gcgagtcatc aatctgaaat tgcaatcgta agtcgtaaat cacagcggtt atgctaaaga
      901 attatttcac aatcgcgatc cgcaatctat ggaagaacaa agtcctgtcg tttataaaca
      961 tatttggact tgcagcaggc atggcgtgca gccttctcat ctttctgttt gtaaccgatg
     1021 aattaagtta tgaccgtttt aataaagacg ctgaccgggt ataccgcgta gtaaaggatt
     1081 ttgtaaacga tgacggcagc aaattaccgg acgcaaccac gccacctgct attgcgcctg
     1141 ccattcaaaa agaaattccg ggcatcgaac atgttacaag ggtgtttcct ggttggggta
     1201 acaatttttt gttcacttat aaagacaaac acatttacga gcagaaactg taccgggtgg
     1261 acagcagttt cttcgacgtg tttacttttc cttttgttga aggcgcagct aagaacgcgt
     1321 tcaaagaggt aaactcagtt gtgatcacac aaaccaccgc gaaaaagtat tttggtgcgg
     1381 aagacccgat gggaaagatc ttacatgaag gcaggctcgg tgatcttatt gtaaccggag
     1441 tggtaaaaga tgtaccccac aacgcgcatt ttcattttga ttttttgatc cccatccgta
     1501 agctggccgg ggatatcgat ggcaactggg ggttctacaa cttctacact tatataaagc
     1561 tgaggccaaa cgtaaatatt aaatcggttg agtcaagtat ccaggcaatt tataaacgta
     1621 atagtgagaa cggtaaaaat attttttata ctcagccatt aaccggtatt catcttgatt
     1681 caaatttaaa atgggagctc gaaccgaata gcgaaagact gtatgtgttt gttttctcag
     1741 cggtggccct gttgatattg cttatcgccg ctatcaacta catcaatctt gtcactgccc
     1801 gatcgtcatt gcgcgcgaag gaggttggca tcaggaaagt ttccggtgcg tacaaaagct
     1861 ctttgataaa acagttcctt cttgagtcgg tggttacatg catgctggcg tcagccgttg
     1921 cgttgataat cgcccaatta ttactgcctg ttgtaaacag cataactcaa aagcaactta
     1981 gcttatttag ttcagacaat tacttcacga tatatttttt aggagccgcc ctgctgatag
     2041 gtgttgtggc cgggcttgcg ccggcactgt atctttcttc attcaaaccc attgttgtat
     2101 tgaaagggag taagatgaac gaacgaaatg tgttcaactt acgaaaggca ctcgtagtga
     2161 tacagtttac catctcgatc tcgctcattg ccggtgcatg tattatttac cagcaggtaa
     2221 attatataca gaatgcaaaa ttaggattga ataaagacca ggtgcttttg atcagggatt
     2281 atggcgctgt atcaccgcca accgcaaatt cttttgaaaa tgccttgctg caaattcccg
     2341 gtgtaaagga cgctgctacg gcagacggtg ttgttggggg tcaaaactgg acaaacagca
     2401 tgagcctgaa aggttcaaaa aacagccagc tcattaattt tttgagcgta ggatacgatt
     2461 acctggatgt gcttggcatc caaataaaag aaggcagaaa tttttctcgg gattttcctg
     2521 ctgacacaat atcctatgtc tccaatcacc agttaaatga agatataggc agcatcatac
     2581 tgaatgaaaa agcggtcaaa gaccttggcg ttccatcacc ggccgtcggt cagcgcattc
     2641 tgtggagcaa cgatggcgat acaaattatt attgtaagat aattggtgtt gcaaaggatt
     2701 tccattttgc gtcattcaga agcgaaataa aaccattcgc atttgttgtc attccaaggc
     2761 ggaccgatta tctcaccatc aaactttcaa cgcagaacct ccctgcaacc atacagaaga
     2821 tagaaagtac atggaaagca ttcgttcctg acaggcccat tcaatattct tttcttgatg
     2881 aaacatttgc ggaattgtac aggtcggaag caaacttcca gcaagtattc attgtacttg
     2941 tgatattgag tatcgttatc gcgtgtcttg gtctgtttgg tcttgccgct ttcaccgcgg
     3001 agcaaagaac aaaagaaata ggcattcgaa aagtattggg cgcaactgtt accggcatcg
     3061 ctgcgatgct caccaaagat tttctcaagc tcgtggtgat ctcaatttta gttgcatctc
     3121 cgttagcata ttgggcgatg agcaagtggc tgcaggatta cgcataccgg atccagatca
     3181 gctggtgggt atttttcatt gccggcgtga tggctgtgat aattgccgtg atgacgataa
     3241 gtttccaggc cataaaggcc gcggtggcga acccggtgag atcattaagg actgaatgag
     3301 tgaatgagta atgagtgatg agtgatgagt ttgtgaaagg tgaattgtga atctgcaatc
     3361 tgcaatcgta aatccgaaat cgtaaatcgt aaatgaagat cttcaatgtt tgaaaattat
     3421 ttaaaatccg cctggcggaa cataaaaaga agcaaagggt ttttcgcgct caattttatt
     3481 ggcttgtata taagcatcgc tgtttgttta ttgataggct tgatcattct gcacgaaacc
     3541 agctttgaca ggtcaacgaa taaaaacctg gtcatctata gggttgtgaa aagcgccaca
     3601 cgttccaccg gcaaaacata cagcgcaata actccttatc cgctcgcggc tgccctgcgt
     3661 gcaacgacca gcatgaagct gatttctcaa attcatttcc aaagagaaga cgttatttct
     3721 ttcgataata aaaaatttaa agaagagaat atcgtttttg cagattctgt tttcccccgg
     3781 ttgtttcctt tgacggttaa acaaggcagt attggaagag cattgaccga acctggcttt
     3841 gcaattgtta ctgaggagac cgcgcacaaa tttttcggca atgaaaaccc gatcgggaag
     3901 cgtgtgaaga tcgcaaacct ggtcgatctg caggtggcgg ccgtaattgc caatgcgcct
     3961 gctaattccc acctgcagta taacatgctc atttcatatc cttcgctcaa gcctgagttt
     4021 attggcggct ttccgcttga tcaatggggc ttaaattccg caggctatac gtacatcggt
     4081 ctgccagatg aaaaccagac aggacatgtc aacgcagcgc tcgcttcgat agccaacgaa
     4141 aatctcaata acaaaaagga cgggactata accaacttca atttgcagcc tctgcctgat
     4201 attcactaca accagttgta tgccggcggc aacccgtcct atacaattaa ttatagctac
     4261 ctgtatttaa taggcgcgat cggtttgttt ttgatcctcg ccgcgtgtat taattatacg
     4321 aacctgtcaa cagcgcttgc gataagaaag tcaaaagaag tcggtgttag aaaaacaatg
     4381 ggcgccacac gagaacatct tctcaggcaa tttctatctg aaacttttgt acttacggct
     4441 tttgttttta tcgcggcagc tttatcagta cggttcttcc tgccaccatt aaataatttt
     4501 ttggataaga atatcccgct caactggctg catgtgaaca gcgccctttt cttaattggt
     4561 ttgtggatcc tggtttccct gctgtccgga ctctatcctg catttgttct atcaggcttc
     4621 aacccggtag cggcgttaaa aaataaaggc ataacaccga aggcatccgt tgtaacgtta
     4681 agaaaaggtt tggttgtgtt ccagttcctg acggctcaga ttctacttat cggcgccatt
     4741 gtggttgcca agcaaatgaa ctttatacag tcgcggcctt tgggttttac taccaacaac
     4801 gtcgttgata ttaatctgcc ggaaaacaaa cacgagcaat taaagttgct gagtgataaa
     4861 ttgtctgcaa taccgggcgt tacgggcgtg agcttttctt tgggtgcacc ggtagcagat
     4921 aataatgcct ccacgagctt caaccggaag gagaaatacg cttcagaaaa aattgatgtt
     4981 gaggtgaaag ctgctgataa aaattatttg agcacctacg ggttgcagtt aacagccgga
     5041 agatggttcg acgacaatga tgagcacagt gtaaatgatg ccattccc
//
LOCUS       DASQJI010000769         4163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_114740,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000769 DASQJI010000000
VERSION     DASQJI010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4163
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114740"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..1905
                     /locus_tag="VEV83_20370"
     CDS             130..1905
                     /locus_tag="VEV83_20370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47549.1"
                     /translation="MLRPLKCFILLICFLQAGSLAFAQTASPPVAEWAKKLADPADKE
                     NKWFYELKPVLDKLDSSSVFSFLNQLGSNSAAKGNYFIARFNCIKAEMLHIKNLPGYP
                     NAFVFTNERVKKQIINLLEEAKVKSYECNDDYLAAFVSCFYGRHMADFGQTEAAVMYM
                     MNSADLYEKVHIPAEFGVYAVLGELLWKVREYEKCIKYTRKAIELLPTLDENRNKMYT
                     KFCRNTMGLAFHRLGQYDSAFAWYRQGLDAVEKNNDTLWTAIISGNMAQIYFAQEKYT
                     TALPLFELDYKMNNVRGYFDNAANALQWVARTNLALGKTEIALQQVREAFELLQKGPS
                     RNYLQNAYFTAAEIFKTLKNDDSSFYYSALYNKLHDSLEREIYQSSVSIIKLRLDDEK
                     NRYNIINLQREKQSQLFLRNIVIISILVLSVFALLVVNRQRLKEKLKTEKARQEKLRM
                     EQEVASAKDQLKVFTEHIIEKTNLIEKLESQVRGKEASVEQQTIISELSQQTILTEED
                     WERFKSAFEKIYPGFFGKLISKSFDITAAEQRMAALTRLNFTTKQIAPMLGISVDSVH
                     KTRQRLRQRLQLSPEANLKEFIANF"
     gene            2268..>4163
                     /locus_tag="VEV83_20375"
     CDS             2268..>4163
                     /locus_tag="VEV83_20375"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MopE-related protein"
                     /protein_id="HYK47550.1"
                     /translation="MKKILLLVLTTGFFARPILAQEITATASSQYICPTSGVILTYTG
                     GIPNSVWEFFNLETNEWESFASADQPVNPLGLVNMPQFEFCSFRVKSSDGNSYLYSNT
                     VDVENVSILNTPIINGRGYSGYKCSNETVTLELIRNEDGSDYVTEPDYTSLHWSTGET
                     TPSINVNAATTTEYSVTGIDNIGCPFTTEPFTVTVLPPTPPFIQTTSSGSVCSGASVT
                     LSFGGFSTAPPCTLSVNGQYPATAITPASDGSETYAVEYYSGHLGEYSIINVEKGKYY
                     SFFTRTDAGQNTSYSTITSADGSQVYTSGFLGNTIWMATYTGQVRFYSNSLDCITNNA
                     IGVNRYLQCFTDPPASFLWMPGGQTTPSITVNPQSTTNYTLTVSNVSTIQFTGCPGSA
                     TQQITVTANSVWYLDADGDGYYTGSGVSSCTSPGTGYKNSGLISGGDCKDDNPAVHPG
                     APEICGNNIDDNCDGQVDENCVVACGNATSLSTTNVTKSSATLNWTAPVNPVQWQVQY
                     KTTNLGSKWVDAPSVATSARSVTISGLKSNQGYNWHIRAKCGKTWTAYSNAAMFKTTS
                     TSNAIATSLTGNSPFRLYPNPNKGQFVIELNSADKINAAAKIQLIDMTGQVVQTENAM
                     INNGSLQK"
BASE COUNT         1268 a          898 c          887 g         1110 t
ORIGIN      
        1 tttttggtct cacgcccttt ggtggaggtc gggacgcggc atccataaac taaatgctca
       61 acaattgccc gtattaaggg accatttatt ctttactttt atattttgat ccgttaaacg
      121 cctaactgca tgttgcgccc gctaaaatgt tttattctac tcatctgctt tttacaggca
      181 ggtagtttag catttgcaca aacagcttca cctccggttg cagaatgggc gaaaaaattg
      241 gccgatcccg ccgacaaaga aaacaaatgg ttttacgagt taaaacctgt actggacaag
      301 cttgacagca gcagcgtttt tagtttttta aaccagcttg gcagtaattc tgcggcaaaa
      361 ggaaattatt ttattgcccg gtttaattgc atcaaggcgg aaatgctgca catcaaaaat
      421 cttcccggat atcccaatgc ttttgttttc acaaacgagc gggtaaaaaa gcagatcatc
      481 aatttactgg aagaagcaaa ggtaaaatct tacgagtgca atgatgatta tctcgcagca
      541 tttgtcagct gcttttatgg aaggcacatg gcagattttg gccaaacaga agctgctgtt
      601 atgtatatga tgaacagcgc tgatctatat gaaaaagtac atatccccgc tgaatttgga
      661 gtttatgcag tgctggggga actgctctgg aaagtgagag aatatgaaaa gtgcatcaag
      721 tatacccgca aagcaatcga gctattgcca actttggatg agaacagaaa caagatgtat
      781 accaaattct gcaggaatac gatgggattg gcgtttcacc ggctgggaca gtacgattcg
      841 gcctttgcct ggtaccggca gggattagac gctgttgaaa aaaataatga caccctgtgg
      901 acagcaatca tttccggcaa tatggcgcag atctattttg cacaggaaaa gtataccacg
      961 gcacttccat tgtttgaact ggattacaaa atgaataacg tacgagggta ctttgacaac
     1021 gctgccaatg ctttgcagtg ggttgcccgc accaaccttg cattgggcaa aactgagatt
     1081 gcgctgcaac aggttcggga agcttttgag ctgttgcaaa aagggccttc acgaaattac
     1141 ctgcagaatg cttatttcac tgcagcagaa atttttaaaa cactgaaaaa cgatgacagc
     1201 agtttttatt attcagcgct atataataaa ctccatgatt ctcttgaaag agaaatttat
     1261 caaagtagtg taagcatcat caaactgcgt ttagatgatg aaaagaacag gtacaatatt
     1321 ataaacctgc agcgggagaa acagtcgcag cttttcctcc ggaacattgt gataatatcc
     1381 atacttgttc tttcggtttt tgctttatta gtagtgaaca ggcagagact aaaagagaaa
     1441 ttaaagaccg aaaaagcaag gcaggaaaaa cttcggatgg agcaggaggt tgcctcagcg
     1501 aaagatcagc taaaagtgtt taccgagcac attattgaaa agactaacct aatcgaaaag
     1561 cttgaatccc aggttagggg caaagaggcc agcgtagagc agcaaacaat aatttcagag
     1621 cttagccagc aaacaatatt aaccgaagaa gattgggaga gatttaaatc tgcttttgaa
     1681 aaaatatatc ccggcttctt tggaaaactc atttcgaaat cttttgacat tacagccgcc
     1741 gaacaaagaa tggccgccct cacccggcta aatttcacta caaaacaaat agcacccatg
     1801 cttggtatat cggttgacag tgttcacaaa accaggcaac ggcttcgcca gcgtttgcaa
     1861 ctttccccgg aagccaacct taaagagttt attgcgaatt tttgagaaca gtgcgtggag
     1921 cgggctaact cattgctaat gaagcatgct cttagcatgt ccgttttttg tactaccccc
     1981 tgtcagcttt ttgtactccc cttgcatttg tttccggctg cttttgacta ttacattgtt
     2041 gcgccaattg aaaagtaagg cgtatgggaa aaaaatcaac tgttacaatt atcatcatcc
     2101 tggtggcact ttcccttatt gtgattgcaa tccgggtgtt tgataaaaga atggagataa
     2161 ttgaacagaa aatgaattca tcgacaaatt ttttcgaccc gacaaacttg gactctcatc
     2221 ttaaaaaaac atacttattc attttttaaa acaataaatc tgtctttatg aaaaaaattt
     2281 tactgcttgt attaacgacc gggttttttg caagaccaat tctggcgcag gaaataaccg
     2341 ccactgcctc atctcagtat atttgtccca caagcggtgt cattcttacc tacacaggcg
     2401 gtattccaaa ttcagtttgg gaatttttta atttggagac caatgaatgg gagagctttg
     2461 cctccgctga tcaacctgtg aaccctttgg gactggttaa tatgccccaa tttgaattct
     2521 gttcgttcag ggtgaaatca tctgatggaa acagttattt atactctaac acggtagatg
     2581 tagaaaatgt tagtatctta aatacgccca taataaacgg ccgtgggtat agtgggtata
     2641 aatgctcaaa cgaaacagta acattggaac ttatacgtaa tgaggatggc tccgattatg
     2701 taacagagcc ggactacacc agccttcact ggagcacagg ggaaacaacg ccttccataa
     2761 atgtaaatgc agctacaact actgaatatt cggtcaccgg cattgacaat atcggatgcc
     2821 cctttacaac cgagcctttc actgtaactg ttttgccacc cacaccaccg tttattcaaa
     2881 ccacttcatc aggctctgta tgcagtggcg cttcggtaac attaagcttt ggtggtttta
     2941 gcactgcacc accgtgtacc ttatcagtca acgggcaata ccctgccacg gccataacac
     3001 ctgcatcgga tggaagtgaa acctatgctg tggaatatta ttccggccac ctcggcgagt
     3061 acagcattat taatgtggaa aaaggaaagt attattcttt ttttacccga accgatgccg
     3121 gccaaaacac cagctatagt acaataacaa gtgccgacgg ctcgcaggta tatacaagtg
     3181 gttttcttgg taacacaata tggatggcaa cctatacagg gcaagttcgg ttttattcaa
     3241 acagcctcga ttgtataacc aataatgcta taggtgtaaa taggtattta cagtgtttta
     3301 ctgatccgcc tgcatcattc ctgtggatgc cagggggaca aaccactcca tccatcaccg
     3361 taaaccctca atcaacaacc aattatacgt taactgtatc aaatgtgtca acgatccaat
     3421 ttaccggttg tccgggcagc gcaacccaac aaataacagt aaccgccaat tcggtatggt
     3481 atcttgacgc agatggcgat ggttattaca cgggctccgg tgtttcctcc tgcacttcac
     3541 ccggcacggg gtataaaaat tctgggttaa ttagtggtgg ggattgtaaa gacgataatc
     3601 cggcggtcca tcccggcgca cctgaaattt gtggcaataa catcgacgac aactgcgacg
     3661 gccaggtgga tgaaaattgt gttgttgctt gtggcaatgc aacttcgctc agcacaacca
     3721 acgttaccaa aagcagtgca actcttaact ggactgcgcc agtaaacccg gttcaatggc
     3781 aggtgcagta taagaccacg aacctgggtt caaaatgggt agatgcacct tcagtggcta
     3841 cttcagcgcg ttcagtcacg atttccggct taaaatcaaa ccagggttat aactggcaca
     3901 tcagggcaaa atgcggaaag acgtggaccg cttattcaaa tgcggcaatg tttaaaacaa
     3961 catccacgtc caacgccatc gcaaccagct taacaggaaa ttcacccttt agattatatc
     4021 ctaatccaaa caaaggacag tttgttattg agctgaacag tgcagataag atcaatgccg
     4081 ctgcaaagat ccagttgata gatatgacag gccaggttgt tcaaacggaa aacgcaatga
     4141 tcaacaatgg tagtttacaa aag
//
LOCUS       DASQJI010000770        15956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1190181,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000770 DASQJI010000000
VERSION     DASQJI010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 15956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15956
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190181"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2183)
                     /locus_tag="VEV83_20380"
     CDS             complement(<1..2183)
                     /locus_tag="VEV83_20380"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYK47551.1"
                     /translation="MNMYAARKKIYNLLLFTLGSCVSVNAQQAGLENQNQYNIHIYKT
                     TDPIKVDGDLNEDVWKKAEAANHFTNWNPTDVGLPKRQTEFRLTYNDEYIFVGVILYD
                     TDYYVIKTLKRDKDVGQSDVWGVTIDPTNQHRNGYTFLVNAYNAQTEDVVPDGGNLDL
                     DLSWDNKWLSAIVRHKTFWSCEMAIPFKSLRYPKDKTVWGFNAGRGDLKNNQYSIWAK
                     LPVEKKFTDLGFTGKLIWDTFPPAAGPNIAIIPYGKTSLTQDKENGAPVKGDLDAGFD
                     LKAGVFKSMNLDLTVNPDFSQVEVDEQVTNLTRFDIFFPEKRTFFLENADLFSAYGAP
                     PIRPFYSRTIGLDKNGNPIPIIGGARLSGNVTQKLRVGLMNMQTQRKDDFAAQNYTAF
                     SFNQTVLKQSVIKGYFLNRQGFMNEEEKQDQPLDEFGRNAGMQFNYSDARGLWGAQAG
                     YHVSFKPGVSGNNSYYQLVGIYNGRTFATRVGWNAVGTNYYTDMGFIARINNYDAAKD
                     SVFRLGFKTLHNENSYTLFPSKGKIVTHVFSLTNDFVWNPNGSFNERDNEFDYTINFK
                     NTGAIEGSLLNQQQDLPYSVKFVTDSLAQPLPPGNYSFSTGGFKFNTDTRRVFSWEAG
                     LKAGGFYNGNIEQYTTTFNFRTQPWGNFSVNFEYDKLHFPEPYGSDNLFLIASRVEIC
                     FSTSVFWTTFIQYNTQQNNMNINSRFQWRFKPMSDIFLVYSDNYFT"
     gene            complement(2270..3172)
                     /locus_tag="VEV83_20385"
     CDS             complement(2270..3172)
                     /locus_tag="VEV83_20385"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HYK47552.1"
                     /translation="MQQKTYPQNESIQIFIKDRLYPRGEAKISVFDSAVQGGDAVWEG
                     LRVYNGKVFSFNEHVERLQASAHTLAFADIPSKEFVRDAVMQTLKANNFYTDAHIRLT
                     LTRGEKITSGMDPRLNQSGSCLIVLAEYKPPVYDNEKGIKLITSHIRRNSPMHLDSKI
                     HHNNLLNNILAKIEANYCGADDAIMLDNLGFVSETNACNIFMANKGSLFTPNADACLP
                     GITRSKVIRLAQQLNVPVFIKNISIAEFYNADEVFTTGTMGELTPVFEIDGRPITNRS
                     KSTIREQLYKAYKQLTETDGENIV"
     gene            complement(3283..5043)
                     /locus_tag="VEV83_20390"
     CDS             complement(3283..5043)
                     /locus_tag="VEV83_20390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012790234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HYK47553.1"
                     /translation="MSKFSVLICIILLASCNNNQTAMSDNNTDTSGLDRKWWKEAVVY
                     QIYPRSFKDSDGDGVGDLKGILSKLDYVKSLGIDVIWLNPIYASPNGDNGYDISDYQN
                     IMQQFGTMADFDALLKGMHDRGLKLVMDLVVNHSSDEHEWFKQSRSSRDNRYRDYYHW
                     WPAEKGKPAPRYSFFDVNNDAWKYDSATNAYYLHYFGGFQPDLNWENPKVRKEIFDMM
                     NFWFKKGVDGFRMDVIPFISKDTSFPVLPAEYNGDFVRYYAHGPHLHEYLQEMNKEAL
                     GKYDVMSVAEGIGLSTNDAHDFVDPDRHELNMLYHFEGMGLGYLPNQFKVPDPNGYSV
                     VEFKKIYSKWDSVFEDKGWGTVYLGNHDQPRMVTRWGNDSPEFRELSSKMLTTFLMTM
                     RATPYYYNGDELGMSNIKFDKIDDYQDVESINMYQQIKSKGGDLQAFLNAQKISARDN
                     SRTPFQWDSSGNAGFTTGTPWLKINPNHSSINAAAEENDPNSCLNYFRKIVKLRKDNL
                     VLVYGKYTLLDADNPQVYAYTRELNGKKILILLNFSSKTATANTGVDMSKATLLIGNY
                     TSQNNSTQLRPYEAAVYEIK"
     gene            complement(5161..5889)
                     /locus_tag="VEV83_20395"
     CDS             complement(5161..5889)
                     /locus_tag="VEV83_20395"
                     /inference="COORDINATES: protein motif:HMM:NF040370.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47554.1"
                     /translation="MPSINRICLWSSPRNISTAMMYSFAQRDDTIAVDEPLYAHYLRV
                     TGIDHPGREETLNSQENDGDKVVRNVIFGKYEKPIVFLKQMTHHLVDLDLRFMSHTRN
                     ILFIRDPKQIIASYAQVRPEVTMQDVGIEKQWWLFNYLTENNFSCIVLDSNEILRSPQ
                     NVLQQLCAAISIPFSEAMLHWPAGPKKEDGVWSKYWYENVHRSTGFEKQKTSERELPE
                     YLRPLYDDCKLYYDRLYPFSIKAE"
     gene            6007..7122
                     /locus_tag="VEV83_20400"
     CDS             6007..7122
                     /locus_tag="VEV83_20400"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK47555.1"
                     /translation="MTIPPIIWPTALGVVAAIQVFYYLYFFARLATYKLPKKTASQEH
                     AVSVVICARDEAPNLVKNLPGILVQEYPTTHEVIVVNDNSTDESKFILERFQKTFKNL
                     NVIPLKQEAKGIPGKKFPLSVGIKSAKHEIVLLTDADCIPASEHWIKIMQDTYVNGVE
                     VVLGYGAYKKYPGLLNKMIRFETFHTALQYFSYALAGKPYMGVGRNLSYRKDTFVRNK
                     GFSAINQIPSGDDDLFINMVANKENTAIVVDKDAHTLSDPHTTWKSWMRQKARHYTTA
                     KYYKESHKFLLTLYSLAHTLVYPLTLVTALFYSWQIAVGIFAFRLLIEAIVWFKSMKK
                     LNETDLFPMFLLFDLWIFIYNLLFFPSLRRKPSRRWE"
     gene            7199..7822
                     /gene="rsmG"
                     /locus_tag="VEV83_20405"
     CDS             7199..7822
                     /gene="rsmG"
                     /locus_tag="VEV83_20405"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HYK47556.1"
                     /translation="MKLIEKYFSDFTEKQIQQFDALDGLYKEWNEKINVISRKDIENL
                     YLKHVLHSLGIAAAFNFSEGTRIIDIGTGGGFPGIPLAIFFPAVSFHLVDSVGKKLKV
                     VEAIAKALELKNVTSQQIRAEEVKDRKFDFVVSRAVAPLKDLWKWSKPLLSKSNKNEF
                     GNGLICLKGGDLAQEISESNLRPRQIALDKIFAEDYFKEKYLLHIAI"
     gene            complement(7956..8726)
                     /locus_tag="VEV83_20410"
     CDS             complement(7956..8726)
                     /locus_tag="VEV83_20410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47557.1"
                     /translation="MKKALQNIKRYALVALPLTIIVICAWQDPKHQQQNGQKLLTKQT
                     DTVPKNKEADIDDFNTKDLDKAMDELNEHMKQLDIQLKDLDVNIDNTIKESLAKVDFD
                     QIGKQVEQSVKNINWNEIQMNVDNSIKQAQEHMKDINFDKINDQMKELKEKIQSDEFK
                     KQFDSDKLQKEIDEAMDKANEGMQKAKNELSQFKEFTNELEKDGLIDNKKGYEIEWKN
                     GNLFINGIQQSQEITNKYKKYYREDGKIKMNAHSSESF"
     gene            9032..12073
                     /locus_tag="VEV83_20415"
     CDS             9032..12073
                     /locus_tag="VEV83_20415"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47558.1"
                     /translation="MFQHITSKDGLASDKANCILQDSKGFYWVGTDNGLQRFDGKNFI
                     IIPSANGYKNEGVSSVAIFDPLLEDKEGNIWGCGDGLISVYHPLTGKWDNIKINDDAV
                     TSHVSQIDYFCKDEWGDMWIVTKMNLYKYDYSTHKVIFWLHLFSETVKQHWNKIVYDH
                     TKKGLWIAGGRTIILADITSKKIRFPFLDHGLQKPQVQRETVYESPVALFLDSRQNLW
                     FSVWNGLIYRYNTVTFRKDSYVIPVDEENRTQNRPIAYYFGEDYKGKIWIGSYEQGFF
                     YYDDKKDNIQPLSVNNKIPYPFHYERHIYDLYRDNEGNMLACTDMGISIFTKSSLEFN
                     ALDENNLLNSFPETSATSIFETTTGDLLVGTWGKGWLLYDNNFRLKKQFYNSDPPTYW
                     NKYRKNMAWCFAEDHNGKIWIGYQFGLIGIYDTTSQHIKFMDVHEFEKKTIRAMACDE
                     KGNIWFGLNSGSLGKWDGAVHKFFTYKNSLPFQNEDATLISDVLINKQKEIWVSTYGR
                     GFYRFDPLHEQIVESYVVRNSDSTVTSVNSLTQINDSIIGISTVSKGVLLFNEKQKNF
                     TSITIKDGLPVDAISGMAEDKQKNLWIATSSGLVRINIRDQKLVSFDEDDGLLEKNFG
                     HNITTLRDGRMAVPASAGFIYFSPDQIKRMVAPPKVQITNFKVFDKTLLIDSLLSRKT
                     IELKHQENFITISYASLSFSQRNTTQYFYRLEGVNKNWVAAGIQRFASYTNLRPGHYT
                     FKVKCENRDGIPSKKTTELSINISHPWWFTWWAYCLYALLVAGIVYTLYRNRISQLEK
                     KQAAQIKAMVATQEEERKRISRDLHDDIGTKLSALKLFLSSLSEKASETNNEEIKLLA
                     ESSEQFIKEAMQDVRQLLLNLSPTVLEEFGYTTAVEGLVNKINETKQIRFILVVFGMN
                     YRLQRDYELALFRITQELINNVLKHAEAKNVSLQIGQRDEKIILMMEDDGKGFDVTAH
                     KDGYGLHNLDARTRLMHGTITIDSHPGKGTSVLIEIPYGKS"
     gene            12133..12786
                     /locus_tag="VEV83_20420"
     CDS             12133..12786
                     /locus_tag="VEV83_20420"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47559.1"
                     /translation="MTSYELPVNLLIADDHQLITDGLSKILESEKTIGEIHTANNGRE
                     AVDKALINDIDCVIMDINMPVLNGLEATKLIKKEKPFIKIIVVSMLCDASIVNKMLKA
                     GADAFINKDTGKSELLKAIEKVILGEKYISPEISNNLFTHLTDRNVNASEKEKHLTTR
                     EIEIIRYIADGLTNIEIAAKLFLSIVTVDTHRKNMLAKLHLKNTASLVKYAAEHKLL"
     gene            12919..13413
                     /locus_tag="VEV83_20425"
     CDS             12919..13413
                     /locus_tag="VEV83_20425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47560.1"
                     /translation="MESIRYPTLRMKELAIIFLIFFSGSSYGQNCATLKNGALRTEVL
                     IPTTSIEPKSSGSPKGFITGISLCFAGSFNDTAIILLNNIQIYKGFFGADVSHDNEHT
                     EMQLPIDKNIKTNILQIELMLHNECMSAQINDRYKFIQVYRGNSWKINFTNYSSLIAK
                     REHN"
     gene            13583..13786
                     /locus_tag="VEV83_20430"
     CDS             13583..13786
                     /locus_tag="VEV83_20430"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HYK47561.1"
                     /translation="MEFKNEELVEREIEIGNYLLQNLSLKLISEKTGLSRKIIAAHIH
                     NMMKKLKAEDMVGLVKLLTLRKK"
     gene            13939..>15956
                     /locus_tag="VEV83_20435"
     CDS             13939..>15956
                     /locus_tag="VEV83_20435"
                     /inference="COORDINATES: protein motif:HMM:TIGR04534.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELWxxDGT repeat protein"
                     /protein_id="HYK47562.1"
                     /translation="MKTKFLLFTPVLLMLTALTVVGQDATNNKPSSENIPFGKKLPPP
                     DVLSSPENSSQQRMPPNLNTTLMQAIKSHDKNAIKKALNNYGQQLKNQRIEESLRIPE
                     NNANANSSQANSNSNFHLTKDINALAESNPHNLPSIRIDIHWNGGNDSSSYAVLNNVA
                     YFVANDGIHGDEFWRSDGTAAGTFMVKDIAPGGNSSRIFDITAANEKIYFTNYDYTAF
                     GYGAWVSDGTESGTQLLINCQEPTKYFAMANKVYFLTDDEYGDQWSVIWETDGTTAGT
                     KRLITLENFGAWISEPTVVNGLFFFTMYTYYNANGTDGWDVWRSDGTETGTYSIASFP
                     YYDDIPAQFTNYNNKLYFSANDGTGRKLWVSDGTDAGTTPAPGNHDVIINADKLETTF
                     PILNNVLYMPGEKASHGNGLYRYDAFNPSGLIKIKDFAPVGDTAFIVPLEMQVVNNTL
                     YFKVTNYTGGIHDELWSSKGTQASTQLVNKFLTGETIKNLCNGSGTFYFVKYDKFLGA
                     ELWTTHETSFGTLATPVSDIFKGAPGSYPSYLTAFNGKLIFAAADEQKGDELFITGGT
                     PFNTHPVKDINTVSTSTSDAGFNFFTAYGGMAGLGKDVLFNAYERVHGRELYKSDGTA
                     AGTELLNDLVSGEAGFFIHDFLSKNNAVYLVAVSSSNNSLYNSGNKYS"
BASE COUNT         4662 a         3159 c         3337 g         4798 t
ORIGIN      
        1 gtgaaataat tatcagaata cacaaggaaa atatcactca tgggtttgaa tctccattga
       61 aacctgctat tgatattcat attattttgc tgtgtgttgt attgaatgaa tgttgtccag
      121 aatacgctcg tagaaaaaca aatttctaca cgcgatgcta tgaggaataa attatcagat
      181 ccgtacggtt cgggaaagtg cagtttgtcg tattcaaagt ttacggaaaa gttgccccat
      241 ggttgcgtcc ggaaattaaa agtagtagtg tattgctcga tattgccgtt ataaaatccg
      301 ccggccttca aacctgcctc ccaggaaaaa actcttcttg tatcagtatt gaatttgaaa
      361 ccacctgtac taaatgaata gttgccaggt ggtaaaggct gcgcaagcga atcggtcacg
      421 aatttcactg agtaaggtaa atcctgttgc tggtttagga gcgatccttc tatagcaccg
      481 gtgtttttga aattaattgt ataatcaaat tcattgtccc gttcattgaa gctgccattt
      541 ggattccaaa cgaaatcgtt ggtgaggctg aaaacgtgcg ttacaatttt tcctttcgac
      601 ggaaataaag tgtaactatt ctcattatga agtgttttga aacccagcct gaaaaccgag
      661 tcttttgcgg catcataatt attaatgcgc gcaatgaagc ccatatctgt ataataattt
      721 gttccaacgg cattccatcc aacccgggtt gcgaatgtgc ggccattgta tattcccacc
      781 aattggtaat aactattgtt gccagatacg ccgggtttaa aggaaacatg gtaaccggcc
      841 tgcgcgcccc acaatcccct ggcgtcggaa tagttgaatt gcatgccggc atttctgccg
      901 aattcatcga gaggctgatc ttgtttttct tcttcattca taaagccttg cctgttcaaa
      961 aaatatccct tgatgacaga ctgttttaga acggtttgat taaacgaaaa tgcagtatag
     1021 ttttgtgcag cgaaatcatc tttcctttgt gtttgcatgt tcatcaggcc aaccctcagc
     1081 ttctgtgtaa cgttaccgct aagccttgca ccaccaatga taggaatcgg gttgccgttt
     1141 ttatcaagcc cgatagttct cgaataaaat ggacgtatcg gtggggcacc gtaagccgaa
     1201 aagaggtcgg cattctctag aaaaaaggtt cgtttttcgg ggaagaaaat atcgaacctt
     1261 gtaagattgg ttacttgttc atctacttcc acctgcgaga aatcgggatt cactgtcagg
     1321 tctaaattca tggacttaaa aacgccagct ttcagatcaa agcctgcatc caggtcgcct
     1381 ttcaccggtg caccattttc cttgtcctgc gtcaaggacg ttttgccata aggaatgata
     1441 gcgatgttcg ggccggccgc aggcggaaac gtgtcccata tcagtttacc ggtgaagccg
     1501 aggtcggtga attttttctc aacgggtaat ttcgcccata tcgaatattg gttatttttt
     1561 aagtcgcctc ttcccgcatt aaaaccccaa accgttttgt ctttcggata ccgaagcgat
     1621 ttgaacggga ttgccatctc acaactccaa aacgttttgt gccggactat agccgaaagc
     1681 cacttgttat cccaactcag gtccaggtcc aaattgccac catccgggac cacgtcttcc
     1741 gtttgtgcat tataagcatt tacgagaaat gtgtaaccat tcctgtgctg gtttgtagga
     1801 tcaattgtaa caccccaaac atcactttgc cccacatcct tgtcgcgctt caatgtcttt
     1861 atcacataat aatcggtgtc gtataagatg acaccgacaa agatgtattc atcattgtaa
     1921 gtgagccgga attcagtctg tcgttttgga aggccaacgt cagtgggatt ccagttggtg
     1981 aagtggttag cagcttcagc ctttttccag acatcttcat tgaggtcacc gtctactttt
     2041 atcgggtcgg ttgttttata aatgtggatg ttgtattgat tttggttttc cagcccagcc
     2101 tgctgcgcat tcacactcac gcaactgccc aaagtaaaaa gcagcaggtt ataaattttc
     2161 tttcgcgcgg catacatatt cataagcaca aaatctataa caaattatag cagttcttta
     2221 ttgataaaat agcactttag ttttaggcgg atatgaaatt cgcctggggt taaacgatgt
     2281 tttcgccatc ggtttcggtg agttgtttat acgctttata aagctgttcg cgaattgtcg
     2341 atttcgatct gttcgtgatt ggccgcccgt cgatctcaaa aaccggcgtt agctcaccca
     2401 tcgttcccgt cgtaaaaact tcgtccgcat tgtaaaattc agcgattgaa atatttttta
     2461 taaagaccgg gacgtttaat tgctgcgcta acctgataac ttttgatctt gttattcccg
     2521 gaagacatgc gtcagcattt ggcgtgaaca atgatccctt attcgccata aaaatattac
     2581 aggcgtttgt ttcagaaacg aagccaagat tgtcaagcat gatcgcatcg tcagcaccgc
     2641 aataattcgc ttcaattttt gcaaggatat tattgagcaa attattgtga tgaatttttg
     2701 aatcgaggtg catgggagag ttgcgccgga tgtgagatgt gatgagcttt ataccttttt
     2761 cgttatcata cactggtggt ttatattctg ccagcacgat caaacaactg ccgctttgat
     2821 ttaagcgggg atccattcct gacgttatct tttctccgcg tgtgagtgtt aagcgaatgt
     2881 gcgcatctgt gtaaaaattg tttgccttta acgtttgcat cacggcgtcc cgcacaaatt
     2941 ctttcgaagg aatatcggcg aatgcgagcg tatgcgctga cgcttgtaac cgctcaacat
     3001 gctcattgaa tgaaaacact tttccattat acactctcaa tccttcccac accgcatcac
     3061 caccttgtac cgcgctgtcg aacacagaaa tttttgcttc gccgcgggga tataacctgt
     3121 cttttataaa gatctgtatg ctttcgtttt gcggataagt tttttgctgc atgattgact
     3181 atttttttta gacgcataag tgaggaccgg caacatgtga tttggcattt gcgatttgga
     3241 aattgtgtcc gatctgacgt ttcacatctc agattcagtc tctcacttta tctcatacac
     3301 cgccgcctca taaggacgaa gctgcgttga gttattttgc gatgtataat tgccgatcag
     3361 taaagtggct ttgctcatat caacgcccgt atttgccgtg gcggtttttg aggagaaatt
     3421 cagcaggatc aagatctttt tgccgttcag ctctctggtg tatgcgtata cctgcggatt
     3481 atctgcgtcg agcagtgtgt attttccata aaccagcacc aggttgtctt ttctcaactt
     3541 cactattttt ctgaaataat tcaggcaact gttcggatca ttttcttccg ctgcagcatt
     3601 gatgctgcta tgattcggat tgatctttag ccacggcgtt ccggtagtaa aacctgcgtt
     3661 gccggagctg tcccattgaa aaggagtgcg gctattgtcc ctggctgaaa ttttttgcgc
     3721 gttcaaaaat gcctgcaggt cgccgccttt acttttgatc tgttggtaca tgttgatcga
     3781 ttccacatcc tggtagtcgt caattttgtc gaacttgata ttgctcatac cgagttcgtc
     3841 accattataa taatatggtg ttgcgcgcat tgtcatcagg aatgttgtaa gcatttttga
     3901 tgagagctcc cgaaactcgg gcgaatcatt gccccaacgc gtcaccatac gcggctggtc
     3961 atgattcccg agataaaccg tgccccatcc tttatcttca aatacgctgt cccattttga
     4021 gtagatcttt ttgaactcaa caacactgta tccgttcgga tcgggcactt tgaactggtt
     4081 tggaagatac ccaagtccca tcccttcaaa atgatacaac atatttagct cgtgccggtc
     4141 agggtctaca aaatcatgtg cgtcgttggt tgaaaggccg ataccttcag caacgctcat
     4201 cacatcatat ttgcccaggg cttctttgtt catctcctgc aaatattcgt gcaaatgtgg
     4261 accatgcgca taatagcgta caaagtcgcc gttgtactcc gcgggtaaaa cgggaaaact
     4321 ggtgtctttt gaaatgaaag ggatcacgtc catccggaaa ccatctacac cttttttaaa
     4381 ccagaagttc atcatatcga agatctcctt acgtactttc ggattctccc agttcaggtc
     4441 tggttgaaat cctccgaagt agtgcaggta ataagcgttc gttgctgaat cgtatttcca
     4501 tgcatcgttg ttcacatcaa aaaaactgta tcgcggtgcc ggctttccct tttctgccgg
     4561 ccaccaatga taataatccc ggtaacgatt atctcttgag ctgcgagatt gtttgaacca
     4621 ttcgtgctcg tcgctgctat gattgacgac aagatccatc accagcttta atccgcgatc
     4681 atgcatacct ttcagcaatg catcaaaatc agccattgtt ccaaactgct gcatgatgtt
     4741 ttgataatcg cttatatcgt aaccgttgtc gccgttgggt gaagcataaa tcgggttaag
     4801 ccatatcaca tcaatgccaa ggctttttac atagtcgagt tttgaaagga tgcctttgag
     4861 atcacccacg ccatctccgt cgctgtcttt gaaactacgc ggatagatct ggtagactac
     4921 tgcctctttc caccattttc tgtccaaacc cgaagtatca gtgttattat cgctcatagc
     4981 tgtttgattg ttattgcagg atgcaagaag gatgatgcaa ataagtacag aaaatttgct
     5041 cataaggaag ttttatgttg ctaaggtagt gtgaatagtg aatggtcaat ggtgaatggc
     5101 ggttgcggtt cagaggaaat atccaaaatc taaaatccgc aatcgccaat ctgcaatctc
     5161 ttactccgct ttgatcgaaa aaggatacaa ccggtcataa taaagtttgc aatcgtcata
     5221 taacggtcgc agatattcgg gcaactcgcg ctcactcgtc ttttgttttt caaaacctgt
     5281 tgaccggtgt acattttcat accaatattt cgaccaaacg ccgtcctcct ttttcggtcc
     5341 cgcaggccaa tgtaacattg cctcagaaaa cggaatgctg atcgccgcac acagttgttg
     5401 caaaacattt tgaggcgatc tcagtatctc atttgaatca agtacaatgc acgaaaaatt
     5461 attttcggtg agatagttga aaagccacca ttgtttttct atcccaacat cctgcatagt
     5521 tacttcgggg cgcacctgcg cgtacgatgc gatgatctgt tttggatcgc ggatgaaaag
     5581 tatgtttctt gtgtggctca tgaaccggag atcgaggtct accaggtgat gtgtcatttg
     5641 tttcaggaaa acaatcggct tctcatattt accgaagatg acgttgcgca caactttgtc
     5701 gccgtcattt tcctgagaat tcaaagtttc ttcgcgcccc ggatggtcaa tgccggtgac
     5761 acgcaggtaa tgtgcgtaaa gcggctcatc caccgcgatc gtgtcatcgc gctgtgcgaa
     5821 ggagtacatc atcgctgtcg aaatattcct ggggctactc cagaggcaga tgcggttaat
     5881 tgatggcatg tgaattatga agatagttat gtatgtgaat gcgggcaaaa ttctacctgg
     5941 gtcacagtta tccacatcaa taagcacggc tgttatcatt gaccacgcct gcctattttt
     6001 gtttgaatga ctattcctcc gattatctgg ccgactgcgt tgggagttgt ggcagctatt
     6061 caagtgtttt attatctcta ttttttcgca cggctggcta cttataagtt gccgaaaaaa
     6121 acagcttcgc aggagcatgc cgtttcggtg gttatctgcg caagggatga agcgccgaac
     6181 ctcgttaaaa atttgcccgg aattttggtg caggaatatc caacaacgca cgaagtgatc
     6241 gtggttaacg acaactcaac cgacgagtcg aaatttattc tcgaacgatt tcagaaaacg
     6301 tttaagaatt taaatgtgat cccgctgaag caggaagcga agggaattcc gggaaaaaaa
     6361 ttcccactgt ctgtcggtat taaatcggca aaacatgaaa ttgttttatt aacggatgct
     6421 gactgtattc ccgcgagtga gcactggata aagattatgc aggatacgta tgttaacgga
     6481 gttgaagtgg tgttgggtta tggcgcttat aaaaagtatc cgggactgct aaacaaaatg
     6541 atccgtttcg aaacatttca tacggcgctg caatattttt cttatgcgct ggccggcaag
     6601 ccgtacatgg gtgttggtcg aaatttatct taccgtaaag acacgttcgt tcgaaataaa
     6661 gggttttctg ctatcaatca aataccgagc ggcgacgacg acctttttat caatatggtt
     6721 gcaaacaaag aaaataccgc aatcgttgtt gataaggatg cgcacacttt gagcgacccg
     6781 catacaacct ggaaaagttg gatgcgccaa aaagcgcgtc actacacaac ggcaaaatat
     6841 tataaggaat cgcataaatt tttattgact ttatattccc ttgcacacac gctcgtttac
     6901 ccgcttaccc ttgtaaccgc tctcttttat agctggcaga tcgcggttgg tatctttgca
     6961 ttccggctgc taatagaagc aattgtttgg tttaagagca tgaaaaaatt gaatgaaact
     7021 gacttatttc cgatgtttct tcttttcgat ttatggatct tcatttataa cctcttattt
     7081 ttcccgtcgc ttcgcagaaa accatcaagg agatgggagt gaggcgccgg tcgttaacgt
     7141 tgaacgccag ttttccataa tgctccatgt catttcaaac gtttgatttt atttgcgcat
     7201 gaaattgatt gaaaagtatt tttcagactt cactgaaaaa caaattcagc aattcgatgc
     7261 actcgatggc ctgtataaag aatggaatga aaagatcaat gttatttcgc gcaaagacat
     7321 cgaaaatctt tatttaaaac atgtgctgca ttcgttgggt attgcagcag ctttcaattt
     7381 ttcagaaggg acacgtataa ttgatattgg taccggcggg ggatttccag ggataccgtt
     7441 ggcgatattt tttccggcgg tttcgtttca ccttgttgac agcgttggga aaaaattgaa
     7501 agtcgtggaa gcgattgcga aagcgctgga attaaaaaat gtcacttcgc agcagatccg
     7561 tgctgaagaa gtaaaggacc gcaaatttga tttcgtcgtc tcgcgtgcgg tcgctccgct
     7621 gaaagacctt tggaaatgga gcaaaccctt gctgagcaag agcaataaga atgaattcgg
     7681 aaacggctta atatgcttga agggtgggga ccttgcgcag gaaatttctg agagcaattt
     7741 gcgtccgagg caaattgcac tggacaaaat ttttgccgaa gattatttta aagaaaaata
     7801 tttgttgcat atagccattt gatgaggata aaaatatttt agcacacttc accgaaagct
     7861 attggaaaaa aaatagcgaa cctataaaaa cgcttttgac gcgcagagat agtagtttgc
     7921 gggtcggggc cgggcgcctt cacgaacgaa gtttcttaga atgactcgga actgtgcgcg
     7981 ttcatcttta ttttgccgtc ttccctgtaa tactttttgt acttgttcgt tatttcctgt
     8041 gactgctgaa tgccgttaat aaagagattc ccattcttcc attcgatctc gtatcctttc
     8101 ttgttatcga tgaggccatc tttttcaagc tcgttggtaa actctttgaa ttggcttagt
     8161 tcattttttg ccttttgcat cccttcgttt gccttgtcca ttgcttcgtc gatttccttt
     8221 tgcagtttat ctgaatcgaa ctgtttctta aactcgtcgc tctgaatttt ttccttgagt
     8281 tccttcattt gatcattgat cttatcaaaa ttgatgtctt tcatatgttc ctgcgcctgt
     8341 ttgatcgagt tatcaacatt catctgtatt tcgttccagt taatgttctt tactgattgt
     8401 tccacttgtt tcccgatttg atcaaaatca actttcgcta acgattcctt gatggtgttg
     8461 tcgatgttaa cgtcaaggtc ttttaactgg atatcgagct gcttcatgtg ctcgttcagt
     8521 tcgtccatgg ctttatcaag atctttcgtg ttgaagtcat caatatctgc ttctttattt
     8581 tttggaacag tgtcagtttg ctttgtcaat aatttttgtc cgttctgttg ctgatgtttc
     8641 gggtcttgcc aggcgcaaat aactattatg gtaagtggaa gggcgacgag cgcataacgc
     8701 tttatgtttt gcaatgcttt tttcatagct gaaaatttcg tgtgaagaat tattggccaa
     8761 atatacgatt gacttcgtag tatatcaaac cgagatggat tttaggaaaa tttaaacaaa
     8821 cgcgacctga tttgcaagga gaggccgacg agtggggcgg gccgaatgca gtgtatagta
     8881 aagttgatat aacccaaaac aaaatcgttc aaacaggttt taatgtttag atttataata
     8941 attcaaagtt cttttgttaa gacggcacct tataaattat tttctgctat tcttttttcc
     9001 gatcagaata tgtgcccaac aacagagcta tgtgtttcag cacatcactt caaaagatgg
     9061 tttagcgtca gataaagcaa attgtattct gcaggattca aaagggttct attgggtggg
     9121 gactgacaac ggtctgcaaa ggtttgatgg gaagaatttt attataattc catctgccaa
     9181 tggatataaa aatgaaggcg tttcatcggt ggctatcttc gatcctcttt tagaagacaa
     9241 ggaaggcaat atttggggtt gcggcgatgg cctgatttct gtttatcatc cgcttaccgg
     9301 gaaatgggac aatataaaaa tcaatgatga tgcagtcact tcgcacgtga gtcaaattga
     9361 ttacttctgt aaagatgaat ggggtgatat gtggatcgtt accaaaatga atttatataa
     9421 atatgactat tcaacccata aagttatatt ctggttacat cttttttccg aaactgttaa
     9481 gcaacattgg aacaaaattg tttatgatca tacgaaaaaa ggtttgtgga ttgcaggcgg
     9541 tcgtacgata atattggcgg atataacaag taaaaaaatc cggttcccgt tcttagatca
     9601 tggtctgcag aagccacaag tgcagcgcga gactgtctat gaatctccag tggcgctttt
     9661 tctggatagc agacaaaatc tttggttcag cgtatggaat gggttaatat atagatataa
     9721 caccgtcact tttcgaaaag acagctatgt tatacctgta gacgaggaaa atagaactca
     9781 aaacaggccg atagcttatt attttggaga agattacaaa ggcaaaatct ggattgggag
     9841 ttatgagcag ggtttttttt attatgatga caaaaaagat aacatccagc ccctttctgt
     9901 aaacaataaa ataccatatc cctttcacta tgaacgacac atttatgatt tgtataggga
     9961 caacgaaggt aatatgctcg cttgcactga tatgggcata agtattttca cgaaatcgtc
    10021 ccttgaattt aatgcccttg atgaaaataa tcttctgaat tctttccctg aaacatcggc
    10081 aacaagcata ttcgaaacaa ccaccgggga tcttctggta gggacctggg gaaaaggctg
    10141 gttattgtat gataacaact tccggttaaa aaagcagttt tataacagtg atccaccaac
    10201 ttactggaat aagtatagaa aaaatatggc ctggtgtttc gcggaagacc ataacggaaa
    10261 aatatggata ggttatcaat ttggactaat tggaatttat gatacaacta gccaacacat
    10321 taaatttatg gacgtgcatg agtttgaaaa gaaaacaata agagcaatgg catgtgatga
    10381 aaagggcaat atctggtttg gtttaaattc cggttctcta ggtaaatggg atggagcagt
    10441 gcataaattt tttacatata aaaattctct tcccttccag aatgaagatg ccacgttaat
    10501 aagcgatgtt ttgataaaca agcagaaaga aatatgggtc tccacatatg gcaggggctt
    10561 ttaccgtttt gatcctttac acgagcagat agttgaaagt tatgtcgtaa gaaattccga
    10621 ttcgactgtt actagcgtaa attctcttac acaaatcaat gattccatta taggtatttc
    10681 caccgtttca aaaggcgtat tgttatttaa tgaaaaacaa aaaaatttta catcgatcac
    10741 tataaaagat ggtttgccgg ttgatgctat ttcaggcatg gcagaggata agcaaaaaaa
    10801 tctatggata gctacctcga gcggattggt acgaataaat ataagagatc aaaaattggt
    10861 ttcatttgac gaagatgacg gcttgctgga aaaaaatttt ggtcacaata ttaccacgtt
    10921 gcgcgatgga agaatggctg tgccggcgtc tgctggcttt atatattttt ccccggatca
    10981 aatcaaaaga atggttgcgc cacccaaagt tcaaatcact aattttaaag tgtttgacaa
    11041 gacactactg atagattctc ttttatcacg caaaacaatt gaattaaagc accaggaaaa
    11101 ttttattacg atcagttatg cttcacttag cttttcacag agaaacacta cccaatattt
    11161 ttatcgatta gaaggtgtta ataagaattg ggtggccgct ggcatacagc gatttgccag
    11221 ttacaccaat ttaaggcccg ggcattatac attcaaagta aaatgcgaaa accgggatgg
    11281 tattccttca aaaaaaacca cagaactaag tattaatatc agtcatccgt ggtggtttac
    11341 gtggtgggct tattgtttat atgcattgct ggtggccggg atagtgtata ccttgtaccg
    11401 gaatcgcata agtcaattag aaaaaaagca agcagcacaa attaaagcga tggtcgccac
    11461 gcaggaagaa gaacgtaaac gcatttcaag agatttgcac gatgatatcg gcaccaagct
    11521 ttccgcatta aaattgttct tatcctctct tagtgaaaag gcctctgaaa caaataatga
    11581 agaaataaaa ttactcgcgg aaagttctga gcaattcatc aaagaagcca tgcaggatgt
    11641 tcgccagcta ttgttgaatt taagtccaac ggtactggaa gagtttggat atactacggc
    11701 agtggaaggg ctggtgaata agatcaacga aacaaaacaa attcgtttta ttcttgtggt
    11761 tttcggtatg aactaccgcc tgcaacgaga ttatgaactg gcattattcc gtatcacgca
    11821 ggagcttatc aataatgtat taaagcatgc tgaagcaaaa aatgtttcac tgcagatagg
    11881 acagcgcgac gaaaaaataa tcctgatgat ggaagatgac ggaaaagggt ttgatgtaac
    11941 tgctcataag gatggatatg gactacataa tttagacgcg cgcacccgac ttatgcatgg
    12001 aactataact attgattcgc acccgggaaa aggaaccagt gtattaattg aaataccgta
    12061 tggaaaaagt tgacagttga ctgatgatcg ttgacagatc acagttgacg gttggcaaat
    12121 aaaatattcg ctatgacatc ttatgaattg ccggtaaact tattaatcgc agatgatcat
    12181 cagcttatca ctgatggact ttccaaaata ctggaatctg aaaaaacaat cggtgaaata
    12241 cacacagcca ataacggtcg tgaagctgtt gataaagcat taataaatga tattgattgt
    12301 gtgataatgg atataaacat gccggtgtta aatggattgg aagccactaa actcatcaaa
    12361 aaagaaaaac ccttcataaa aataattgtg gtaagtatgt tatgtgatgc ttcaatagta
    12421 aataaaatgt tgaaggcagg cgcagatgca tttatcaata aagataccgg caagagtgaa
    12481 ttgcttaagg ccattgagaa ggtaatacta ggtgaaaaat atatcagccc ggaaatttct
    12541 aataatttat ttacccatct tacagatcga aatgtaaatg catctgaaaa agaaaaacat
    12601 cttacaacac gagaaattga aattatccgc tatatcgcag atggacttac caatattgaa
    12661 atagcagcta aactctttct aagcattgtt accgtagata cgcacaggaa aaacatgctt
    12721 gccaagctac atttaaaaaa tacagcttca cttgtgaaat atgcggccga acataagttg
    12781 ctgtagtgtt attattgttt tcacctttta accgttcaca tcttcatctt tcactctttc
    12841 acgtttacgt acaccaaaag gtgtatatga aaaatacacg taatggtgta ttgtggccag
    12901 gcttttcata catcagattt ggaaagtatc agatacccaa cgctaagaat gaaagaactg
    12961 gcgatcatat tcctaatatt tttttccggt agcagctatg gacaaaactg tgcaacgcta
    13021 aagaacggag cccttagaac agaagtgctt atacccacaa catctattga gccaaaatca
    13081 tccggctcac ccaaaggctt cattaccggg atctcgctct gttttgcagg gagctttaat
    13141 gatacggcta tcatattgtt gaataatatt caaatctata aaggcttttt tggcgcggat
    13201 gtttcccatg acaatgagca tacggaaatg cagcttccaa tagacaaaaa tattaaaacg
    13261 aatattttgc aaattgagtt aatgcttcat aatgaatgta tgagtgctca gataaacgat
    13321 aggtataaat ttatacaagt gtaccggggc aatagctgga aaatcaactt tacaaattat
    13381 tcatccctga ttgccaaacg agaacacaac taagtgctgc atgtcctttg ctttcctcaa
    13441 ttttttcttt ttttaaaatt cgtctacacc ataaggtgta tatgaaaatt acacttaatg
    13501 gtgtattgca ttcagcattc ataaacttca attttgtgtt tcagtaagag ccaactatct
    13561 cagcatattt accagccata ctatggaatt caaaaatgaa gagctcgtgg aacgggaaat
    13621 agaaatagga aattatctct tacagaatct ttcattaaaa ctcatttctg aaaaaaccgg
    13681 tttaagcaga aagattattg cggcgcatat ccataatatg atgaaaaaac taaaggcaga
    13741 agatatggtc gggctggtga aattgctaac gttaagaaaa aaataaaaaa tagccacctc
    13801 atgaaataag atttttacta atcaacaaaa acatatcgcg aatcaaaaaa ttttttacat
    13861 catagttcat aagccgttca tcaatataat tattatctcg cagatcaatt catttcatca
    13921 aaattttaaa acaaaatcat gaaaacaaaa tttttacttt ttacgccagt attgctaatg
    13981 cttactgcgc tcacagttgt tggccaggat gcaactaata acaagccctc atccgaaaat
    14041 ataccctttg gcaaaaagct gccgccgcct gatgttctga gcagccctga aaattcatcg
    14101 cagcaaagaa tgcctcctaa tctaaatacg actttaatgc aggccataaa atctcatgat
    14161 aaaaatgcga taaaaaaagc tctaaataat tatggtcagc agttgaaaaa tcagcgcatt
    14221 gaggaaagct tgcgtattcc ggaaaataac gctaatgcaa attcaagtca ggcaaattct
    14281 aattccaatt ttcatcttac caaagatatt aatgcgcttg cggaaagtaa cccccacaat
    14341 ttaccttcca ttcgtataga cattcattgg aatggtggca acgattcttc ctcgtatgcc
    14401 gttcttaata acgttgccta ttttgttgct aacgatggca ttcatggaga cgaattctgg
    14461 cgtagtgatg gtactgctgc gggcaccttt atggtaaaag atattgcgcc gggcggtaac
    14521 tccagtagga tatttgatat tacggctgca aatgaaaaaa tatatttcac taattatgac
    14581 tatacagctt tcggctatgg cgcatgggta tcggatggaa cagaaagcgg tacacaactg
    14641 cttataaatt gtcaagagcc aacaaaatat tttgcgatgg ctaataaggt ttattttctt
    14701 acagacgatg agtacggtga tcagtggtca gtaatctggg aaactgatgg aacaactgcc
    14761 ggtacaaaaa ggttaataac tcttgagaat ttcggggcct ggatttctga gccaacagtg
    14821 gtaaatgggc tgttcttttt tacgatgtac acttactaca acgctaacgg aaccgatggc
    14881 tgggatgttt ggagaagcga cggcaccgaa acaggcacct atagtatagc ttctttccct
    14941 tattatgatg atatacccgc acaatttaca aactacaaca ataaacttta cttctctgcc
    15001 aatgatggaa ctggtcgcaa gctttgggta tcagacggaa ctgatgcagg taccacacct
    15061 gcaccgggta atcatgatgt aataataaac gcggataaat tggaaacgac ttttccaatt
    15121 ttgaataatg ttttatacat gccaggtgag aaagcatccc atggaaacgg gctgtataga
    15181 tatgatgcat tcaatccgtc agggcttatt aagattaaag attttgcgcc tgttggtgat
    15241 actgctttta tcgtgcctct tgaaatgcag gtggtaaata atacactgta ttttaaggta
    15301 accaattata ccggcggcat tcatgatgaa ttgtggagct caaaaggaac gcaagcatca
    15361 acacagcttg taaataaatt tctgaccgga gaaacaataa agaatttatg taacggaagc
    15421 ggcacttttt attttgtaaa atatgataaa tttttggggg ccgaattatg gacaactcat
    15481 gaaacttctt ttggaacatt ggcaacgccg gtaagcgata tttttaaagg agcacccggt
    15541 tcttatccct cttatctaac ggcgttcaat ggaaaattga tatttgccgc tgccgatgag
    15601 caaaagggag atgagctgtt tataaccggt ggtacccctt tcaacacgca tccggtaaaa
    15661 gacatcaata cagtttccac gtcaacgtct gacgccggat ttaatttctt caccgcttat
    15721 ggcggtatgg ccggtttagg aaaagacgtg cttttcaacg cttatgaaag ggttcatggt
    15781 cgtgagttat ataagtctga tggaacggct gcaggaacgg agttgctgaa cgatctagta
    15841 tctggcgagg caggtttttt cattcatgat tttttatcaa aaaataacgc cgtctatttg
    15901 gttgctgtaa gcagcagtaa taattcactg tataattcgg gtaataaata ttccat
//
LOCUS       DASQJI010000771         3559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_115208,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000771 DASQJI010000000
VERSION     DASQJI010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115208"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VEV83_20440"
     CDS             <1..212
                     /locus_tag="VEV83_20440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /protein_id="HYK47563.1"
                     /translation="VGVMRSMSAHGDYKDLLHFLDCQKVNHVKKTFIVHGEYDVQQDF
                     REKLMQKGLREVYVPERHQQFVLNE"
     gene            556..1401
                     /locus_tag="VEV83_20445"
     CDS             556..1401
                     /locus_tag="VEV83_20445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK47564.1"
                     /translation="MKKLVLFSVLILTYAGSFAQSSMPSCCTKVATEKFALFATDVSF
                     VISHEAPLPFVYHSANGQDITFKAADGTDAHGWMVKASKPTDYYLFVIHEWWGLNDYI
                     KQESEKLGNELGVNVIAIDLYDKKVATTPDEASKMVQSVKTDRAVNIIKGAYGYVGNK
                     AKVFTIGWCFGGGWSLQTALLGGNQVAGCVMYYGMPEADVNKLKTLHCDVIGFFGNKD
                     GYITPKIVDEFKVHMKEAGKKLDVYQYDADHAFANPSNPHFDKDATADSHAKAIAFIK
                     ERMKS"
     gene            complement(1457..1771)
                     /locus_tag="VEV83_20450"
     CDS             complement(1457..1771)
                     /locus_tag="VEV83_20450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47565.1"
                     /translation="MNSVNVRIANSMGFSVDSAFLVYDESGFNYRAIAAGDTTGYHLY
                     ESLIDDPAVYFFKNGDQFLAGPILAPPLSAPTHLANGKYIVRIFVDSSFLTGYNVEFI
                     KE"
     gene            complement(1877..2677)
                     /gene="proC"
                     /locus_tag="VEV83_20455"
     CDS             complement(1877..2677)
                     /gene="proC"
                     /locus_tag="VEV83_20455"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HYK47566.1"
                     /translation="MNNKIAIIGGGNLGTAIAEGLISSRFAKPQHIIITKRNIATLRS
                     LEERGVMISNNNVEAIKYAKWIILAVKPFQVKDILEQLKPHLNPLQHQLISVMTGVWI
                     KDLQEILGHDFTLFRAMPNTAIAIQQSITCICKHGANDEQVQFVADLFSQLGKVVFIE
                     EKLMDAATVLGACGTAYAMRYIRANIQGGIEIGFDAATASLIAAQTVKGAADLLLTKH
                     THPEQEIDKVTTPKGCTIAGLNEMEHQGFSSSLIKGVVTSYNKIVNDM"
     gene            complement(2833..>3559)
                     /locus_tag="VEV83_20460"
     CDS             complement(2833..>3559)
                     /locus_tag="VEV83_20460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine synthetase type III"
                     /protein_id="HYK47567.1"
                     /translation="IALNTIMAETLKTFKKDVDALIDKGDKKEIAIMHVIQKYITESK
                     KILFEGDNYSEEWHHEAERRGLPNVRTTPLALDAMVTDKGKHLFESNKVYTHSELEAR
                     HEIELEKYIKKVQIEARVMGDLAINHILPAALEYQNVLVTNIRGLKEAGLPESSYCSQ
                     TKILQQISEHVQAVYTNVNEMVKQRKVANNMTDTRTKAIAYCTQVKEAYFDEIRYHAD
                     KLETLVNDEKWTLPKYRELLFLR"
BASE COUNT          966 a          755 c          817 g         1021 t
ORIGIN      
        1 gggttggcgt tatgagaagt atgagtgcgc atggcgatta taaagacctg ctgcattttc
       61 tggattgcca aaaagtaaat catgtgaaaa agacatttat cgtgcatgga gaatatgacg
      121 tgcagcagga ttttcgggaa aagttgatgc agaaaggatt gagggaagtt tatgttccgg
      181 agaggcatca gcaatttgtt ttgaatgagt gagcgtagaa actcaaaaag tatgctgcag
      241 ttcgtctccg tgtagtaaag ccttagcgtt tcgaaagatc aaaaaccacc aagggcctca
      301 ggcactaagt ttcacaatgg gtttcgcatt tcttctctca ctttcttttt ttgtagagct
      361 ggtttgtgaa ggcggaagtt gattgaagct gatattttga gccacatagg acatagagca
      421 caataggcac acacatagac tatgtgaaat ttctatgttt ctgtgtacct atgtggttca
      481 cattcttgat tcgcccgaat aatcaaaatc atttttatat ttacgacatt tctataacaa
      541 caaaaaatca atcacatgaa aaagcttgta ttattctctg tgttgattct aacctatgcc
      601 ggatcatttg cacagtcatc gatgccttca tgctgcacaa aagtcgccac agaaaaattt
      661 gccttgtttg cgactgatgt ttcattcgtc atcagccacg aggcgccgct gccgtttgtt
      721 tatcacagcg ccaacgggca ggatataaca tttaaagccg cagacggcac agatgcgcat
      781 ggctggatgg taaaagcatc aaagccgaca gattattatc tttttgtgat ccacgaatgg
      841 tggggattga atgactacat caagcaggaa agtgaaaagt tagggaatga gcttggtgtg
      901 aatgttattg cgatcgatct ctacgacaaa aaagttgcaa caactccgga tgaagccagc
      961 aaaatggtgc aaagcgtgaa aacagacagg gcagtaaata tcatcaaagg agcttatggc
     1021 tatgttggga ataaggcaaa agtttttact atcggctggt gtttcggtgg cggctggagt
     1081 ttacaaacgg cattattggg tgggaaccag gtggcaggat gcgtaatgta ttacggcatg
     1141 ccggaagcag acgtaaacaa attgaaaaca ttgcattgcg atgtgatagg tttcttcgga
     1201 aataaagatg gatatattac tccaaagatt gtcgacgaat tcaaagtaca catgaaagaa
     1261 gccggaaaaa aattggacgt gtatcagtac gacgctgatc atgcgtttgc gaatccgagc
     1321 aatccgcatt ttgacaaaga tgctacagcg gattcacacg cgaaggcgat tgcgtttatt
     1381 aaagagagga tgaagtcgtg agggaaaggg aggaaatgag aaatgagaag taagaagtaa
     1441 gaggaaactt agggtgtcat tccttgatga attcaacatt gtagcctgtg agaaagctgg
     1501 agtctacaaa tattctcaca atatattttc cattggccag gtgggtagga gcagataggg
     1561 gcggagccaa gataggaccc gccaaaaatt gatcgccatt tttgaagaaa tagactgccg
     1621 gatcatcgat caggctttca taaagatggt accctgttgt atcgccagca gcgatcgcac
     1681 gatagttgaa accgctttca tcataaacca ggaaagcact gtctacgcta aaccccatag
     1741 aattcgcgat tctcacattc acactattca cttggtcttt tttacagtcc gcaaagagta
     1801 agagacaaat ggctattgtt agagggcggc gcataggcag aggacattca aagctggcga
     1861 agcgttgctt tcaaactcac atatcgttca cgatcttatt atagcttgta accacgcctt
     1921 tgatcagcga agagctgaat ccctggtgct ccatttcgtt gaggccggcg atagtgcaac
     1981 cttttggggt tgttaccttg tcgatttcct gttccggatg tgtatgtttt gttagcagca
     2041 gatcggctgc gccctttact gtttgcgcgg cgatgagcga agcggttgca gcatcaaagc
     2101 caatttcaat tccgccctgt atgttcgcac gtatgtaacg catagcgtag gcggtgccgc
     2161 aagcaccaag caccgttgcg gcatccatca atttctcctc gataaaaacg accttgccta
     2221 attgactgaa caggtcggca acaaactgca cctgttcatc attggccccg tgtttgcaaa
     2281 tgcacgtgat gctttgttgg atcgcaatgg ccgtgttcgg catcgcacga aataaagtga
     2341 aatcgtgacc gaggatctcc tgcaggtcct tgatccacac tccggtcatc acgctgatca
     2401 gttggtgctg taagggattc aagtgcggct tcagttgctc aagaatatcc tttacctgga
     2461 atggcttcac cgcaaggatg atccactttg catactttat tgcttcaaca ttgttgttgc
     2521 tgatcataac gcctctttct tcgagcgaac gaagcgttgc gatgttccgc tttgtaatga
     2581 tgatatgctg cggtttggca aacctgctgc tgatgagtcc ctcagcgatc gcggttccta
     2641 aatttccgcc gccaatgatt gcgatcttgt tattcataaa ataaaataaa aagttcgaac
     2701 taatattaag acgctttcct gcatggaagc actcattcga aacgcgctgt gaagttactc
     2761 ccctttaggt gttgcaggca aaaaagccgc tcctataaaa gaaagcggct taaacgtgtc
     2821 tccgattgct tgctatctta aaaataaaag ttcacggtat ttcggcaacg tccatttctc
     2881 atcgttcacc aatgtttcca gcttatctgc gtggtagcgg atctcgtcaa aatacgcttc
     2941 cttaacctgc gtacaatatg cgatggcctt ggttcttgta tctgtcatat tgtttgccac
     3001 cttcctttgt ttcaccattt catttacgtt cgtgtaaacc gcctgtacat gttcagaaat
     3061 ttgctgcagg atcttcgttt ggctgcaata agaactttcc ggcaaaccgg cctcctttaa
     3121 tccgcgaata ttcgtcacca gcacattttg atattcgagc gctgccggaa gaatatgatt
     3181 gatcgccagg tctcccatca cccttgcttc tatctgaact ttcttaatat atttttcaag
     3241 ttctatttca tgacgtgctt ccagttcaga atgagtatac actttgttac tttcaaatag
     3301 gtgcttccct ttatcagtta ccattgcatc aagagcgagt ggcgtagtac gtacattagg
     3361 taagccgcga cgttctgctt cgtgatgcca ttcttcgctg tagttgtcgc cttcaaacag
     3421 gatcttcttg ctttctgtga tgtacttctg tatcacatgc atgatagcaa tttccttttt
     3481 atcgcccttg tcaataagcg cgtccacatc tttcttaaat gtcttcagcg tttctgccat
     3541 gatggtattc aacgcgatc
//
LOCUS       DASQJI010000772         1730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1959130,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000772 DASQJI010000000
VERSION     DASQJI010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959130"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..>1730)
                     /locus_tag="VEV83_20465"
     CDS             complement(51..>1730)
                     /locus_tag="VEV83_20465"
                     /inference="COORDINATES: protein motif:HMM:NF044618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M36 family metallopeptidase"
                     /protein_id="HYK47568.1"
                     /translation="MKLQPINPTFVEERDAILKADTLLYNGQHSCKIWAAFAKRGLGY
                     SAVSGTNGLGDETESFDVPFSCDPTQKRFHIVKTGPGKIQNNSLVNYMITVTNLYPQT
                     LRNLVVKDTLASSLTLMKATGKPAVSGRILTWTLNLKANETKTFTISANLNSSSASTA
                     LFGDDQEAGAGNWTADVSATANWTYTTDASQAYSGSHFWFVTDYDIGGSNTSLQTTNA
                     INIPAGAELVFIHKYAAEDAYDGGVVEISENGTTWTYLPPTKFVRGGYSGIIPTANNA
                     YIGTADKAAFTGVSDGYIVSIASLSDYAGKNIYIRFRMVSDVTGGSIENGGWWLDDVY
                     ILLNRTELVNTATGITSSKDRIMPNEGSNAYSSTSGFIMGSLAIAQNNILSASSNEKQ
                     VDLKWHSTIAMTDPVFDIERKAASESSFRKIGALELKGDFARNYSFTYTDQNAIGGKA
                     EYRIKVASSATNAVAYTNIALAQVGDRFNARLYPNPAKNMVNVSVNNPAASAVYINLF
                     DLKGKKVASFNAGKITKQIISLPLQQLAAGTYWLEVKTPDESTTLQLIVQQ"
BASE COUNT          425 a          414 c          369 g          522 t
ORIGIN      
        1 aaaaaagggc gaatagaatt cctattcgcc cttgaaggtt atatagctgc ctattgctga
       61 acgatcaatt gcagcgttgt cgattcatcg ggtgttttta cttccagcca gtaagttcct
      121 gctgcaagtt gttgcaacgg caaagaaatt atttgcttcg ttatttttcc tgcgttaaag
      181 cttgcgacct tttttccttt caggtcaaac aaattaatat acacggcgct cgccgctgga
      241 ttattgacag aaacgttcac catgttcttc gcgggattcg gatacagcct ggcattgaaa
      301 cgatcgccaa cctgtgccaa tgcaatgttt gtgtatgcaa ctgcattcgt agcgctactc
      361 gcaactttga tgcgatactc ggccttaccg ccaattgcat tttggtcagt gtacgtaaaa
      421 gaataattgc gggcgaaatc acctttcagc tctaacgctc ctattttccg gaaagaagat
      481 tcactcgccg cttttctttc gatgtcgaat accgggtcgg tcatcgcaat tgttgaatgc
      541 catttcagat ccacctgctt ttcgtttgag cttgctgata aaatattgtt ctgcgcaatt
      601 gccaacgagc ccatgataaa accacttgtc gatgagtaag cattcgagcc ttcatttggc
      661 ataatgcgat ccttgctgct tgttatgccg gttgctgtat tcaccaattc tgtgcgattg
      721 agcaagatat aaacgtcatc cagccaccat ccgccatttt cgatactgcc acccgtaaca
      781 tcagaaacca ttctgaatcg tatataaata tttttcccgg cataatcgct cagcgatgcg
      841 atcgaaacaa tatatccgtc agacacgccc gtaaaagcgg ccttgtcagc ggttccaatg
      901 tatgcattgt tagccgttgg aataatgccg gaataacctc ctcttacaaa ttttgtaggc
      961 ggcagataag tccatgttgt accgttctct gaaatttcaa ccacgcctcc atcatacgca
     1021 tcttcggccg cgtacttatg aataaaaaca agttcagctc ccgcaggaat atttatcgcg
     1081 ttggtagttt gcagcgatgt gttggaacct ccgatatcat aatctgtaac aaaccagaaa
     1141 tgagaaccgc tgtatgcctg cgaggcgtca gttgtgtaag tccagtttgc agttgcactt
     1201 acatctgcag tccagtttcc tgcacccgct tcctggtcgt cgccgaacag tgcggttgat
     1261 gctgatgaac tattcaggtt cgcgcttatg gtaaacgttt tcgtttcgtt tgcctttaag
     1321 ttcaacgtcc aggtgaggat ccgcccacta accgcaggct tgcctgtagc tttcatgagc
     1381 gtgagcgatg atgcgagcgt atcttttacg acgaggtttc tcaacgtttg cgggtacaag
     1441 tttgtaaccg tgatcatata attcacgaga gaattgttct gaatttttcc cggcccggtt
     1501 tttacgatat gaaatctctt ttgtgtcggg tcacaactga atggcacatc gaaagattca
     1561 gtttcgtcac ctaaaccatt cgttcctgaa acggctgaat aacctaaacc gcgtttcgca
     1621 aacgctgccc agatcttgca actgtgctga ccgttatata acaatgtgtc ggctttcaat
     1681 atagcatctc tttcttccac aaatgttggg ttgatgggtt gaagtttcat
//
LOCUS       DASQJI010000773         3628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2420939,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000773 DASQJI010000000
VERSION     DASQJI010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2420939"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(359..2923)
                     /locus_tag="VEV83_20470"
     CDS             complement(359..2923)
                     /locus_tag="VEV83_20470"
                     /inference="COORDINATES: protein motif:HMM:NF039873.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47569.1"
                     /translation="MKKFFGPLFFCLFSIPLVMNAQTNARQKDTVATANPSYDKAGGF
                     KRLFLGQHYRKEWATPVRMKILNLDSAGGGLTAIKAGGGHQTKSLRFHGEDGKEYVLR
                     SVNKDPTKALPPQFVGTFAADIVQDQISSSNPYAALAVASLAQTAGIYHSTPQIVFVP
                     PSPRLDTFINDFANTVCLFEERPTDNEQGDREFGNSKNIINSEKLSEKLYSDNNAHVD
                     QRSFLKARLFDLWIGDWDRHQDQWVWAEFNEGGKTIYKPIPRDRDQAFAKLDGILPSL
                     ASKPWAIRVTKNFDDRVRDVPGLAMSATVMDHFFLNELTLADWLAVAGELKQSLTDEK
                     IEEAFTFLPSNIYALHGKEVIEKLKRRRDELDETARDYYEFLAKTVSIGGTMLKEIFD
                     VTRMNGDSTNVVIHKADKKGGETGVIYHRTFLNNETKEIRLYGFGGDDKFNITGDDGG
                     GILIRIISGNGNDSVIDNSKANGGKTKLYDKNETTFSSGEVKRYITQDTLKTEFTPLS
                     FKYNWFAPKISIGYNPDDGVYLGGGIIMKKQQFGKAPWGSMQSIWGNYAFATGAYNFW
                     YEGIFREAVGKWDLHLDAKINAPNYVLNYYGQGNETVKIDSLHDYYRVRINQWIVAPS
                     LQRQFGEHNTFGFGLDYESIKVERSDNRYVTDSAYRKDSSIFDRRSFGSAMMNYQFNT
                     TDNPLYPRRGVKFNAAAEFIQNVDETDRNFGRLSSDFSFFLSAGSLTAAFRFGGATNL
                     GDKYEFYQANTLGGTTNLRGYGRTRFAGKSSFYQNTELRFKLQNLQGYFFRGNWGLLG
                     FVDNGRVWIPEEASDTWHFGYGGGIWFLPYNKLAFAATYGASKEDSFIYLKADFLF"
     gene            3375..>3628
                     /locus_tag="VEV83_20475"
     CDS             3375..>3628
                     /locus_tag="VEV83_20475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK47570.1"
                     /translation="MSSSRQLTAIMFADIAGYTSFMQEDEAMALELRNKFLQKIGEET
                     SAHNGRILDIKGDGALCSFASTIEAVKAAISLQLEMQAAPV"
BASE COUNT          966 a          832 c          754 g         1076 t
ORIGIN      
        1 tgaatagtta ataagtttaa tgggttattg gttaattggg gtatcagtta attagttaat
       61 taacgccttg tgctattaat aatcagagag cgtgtccagg ggaaaaggtc agactttgtg
      121 aaacttggtg ccttggcgtc ttcgtggttc ctcacttttt aaaccactaa gactcgaaga
      181 cacactaagc gaatgagccg cacactctga aaattaataa cacaacacgt tagttaatga
      241 gtttatcggg taagtggggt atttgtttat gcggtaatta gccaattaaa aattgtttta
      301 atacacgtcg tccgtgccaa tcaagtttgt tcgcagttca aacgtcgtgt gaacgatcct
      361 aaaacaggaa gtcagccttc agatatatga agctgtcttc tttcgaagca ccatatgtgg
      421 ctgcaaatgc aagtttgttg tacggcagga accaaatgcc accgccgtat ccaaaatgcc
      481 atgtatcgga agcttcttcc ggtatccaaa cacggccatt gtcgacaaac ccaagcaagc
      541 cccagttgcc gcggaagaaa tagccttgca ggttctgcag cttaaaacga agctcggtgt
      601 tttgataaaa actgctcttg cctgcgaacc tcgtgcgtcc atatccgcga agattcgtgg
      661 taccacctaa ggtattcgcc tggtagaact cgtacttatc tccaagattc gttgctcctc
      721 caaaccgaaa tgcggcagtt aaagatccgg ccgaaagaaa gaaagaaaaa tcggatgaca
      781 agcgtccaaa attcctgtct gtctcgtcca cgttttgtat gaattcagca gccgcattaa
      841 atttgacacc tcttcgtgga tacaagggat tatctgttgt gttgaactgg taattcatca
      901 ttgcacttcc aaaagatctc ctgtcaaaaa tcgacgaatc tttccgatac gctgaatcag
      961 taacatacct gttatctgac ctttccactt tgatcgattc ataatccaaa ccgaaaccga
     1021 acgtgttgtg ctcaccaaat tggcgctgaa gcgatggcgc aacgatccac tggtttattc
     1081 tgacccggta ataatcatgc agcgaatcta ttttcactgt ctcattgccc tggccatagt
     1141 aattcaatac ataattcgga gcgttgatct ttgcatcgag gtgcagatcc catttgccaa
     1201 ctgcctccct gaaaattcct tcataccaga aattataagc cccggttgca aacgcataat
     1261 ttccccagat cgactgcatg cttccccacg gagctttacc aaactgttgc ttcttcatga
     1321 ttatcccgcc gccgagataa acaccgtcgt ccggattata accgatagat attttggggg
     1381 caaaccaatt atatttaaac gacagaggcg tgaattccgt tttcaaagta tcctgcgtga
     1441 tatacctttt tacttcaccg gaactaaaag tagtttcatt cttatcgtac aattttgttt
     1501 taccaccatt cgctttcgaa ttatcgatca cgctgtcgtt gccgttaccg ctgatgattc
     1561 ttatcaaaat gcctccgcca tcatcgccgg taatattaaa cttgtcgtcg ccgccaaatc
     1621 catacagtct tatctctttt gtttcattgt tcaaaaaagt tcgatggtag ataacaccag
     1681 tctcccctcc ttttttatct gccttatgta tcacaacatt tgttgaatcg ccattcatcc
     1741 gcgtcacatc gaaaatttct tttagcatcg tgccgccaat cgacacggtt tttgcgagaa
     1801 attcgtagta gtcccgggca gtttcatcca gctcgtcgcg acgcctcttc aatttttcaa
     1861 tcacttcttt gccgtgcagc gcataaatgt tcgatggcaa aaaggtgaat gcttcttcga
     1921 tcttttcgtc ggttaaactt tgcttgagct cacctgcgac agcaagccaa tccgcgagcg
     1981 tgagctcatt taggaaaaaa tggtccatga cagtagcact catcgccagt cccggcacat
     2041 cacgaactct atcgtcaaaa ttctttgtta cacgtattgc ccatggtttt gatgccagcg
     2101 agggtaatat gccatcgagt ttagcaaagg cctggtcccg gtctcttggg atcggtttgt
     2161 aaattgtttt gccgccttca ttaaattcag cccaaaccca ctggtcctgg tgccggtccc
     2221 aatcgccgat ccatagatca aacaacctcg ctttcaaaaa agatctttga tccacatgag
     2281 cgttattgtc gctatataat ttttctgaaa gtttttcgga attgataatg ttttttgaat
     2341 taccgaactc gcgatcgcct tgctcgttat cggtcggtct ttcttcaaac aagcaaaccg
     2401 tatttgcaaa atcattaatg aacgtatcca gtcttggcga ggggggcaca aaaacgatct
     2461 gtggagttga atgataaatg ccggcggttt gggcaagtga tgcgacggca agagcggcat
     2521 atgggttgga cgacgatatc tgatcttgca cgatgtctgc agcaaatgtt ccgacaaatt
     2581 gcggtggcag ggctttcgtt ggatctttgt tcaccgaacg cagtacatat tctttcccat
     2641 cttctccatg aaagcgaaga gactttgttt ggtggccgcc acccgctttg atcgcagtta
     2701 aaccgcctcc ggctgaatcg agatttagaa ttttcattcg aacgggcgtc gcccactcct
     2761 tcctgtaatg ctggccgagg aataaacgct tgaagcctcc ggctttatca taagacgggt
     2821 ttgccgtggc gactgtatcc ttttgccttg catttgtttg cgcgttcatt acaaggggaa
     2881 ttgaaaacaa gcagaaaaaa agcggaccaa aaaacttttt catcgtttag tgtttttaga
     2941 ttttttaaac catgctcttt atgtggttcg actcgtccga agataaacta cgtcatttta
     3001 atgcattaaa taatcagtgc agtcatttct gcgcttttaa tatagaattt tttttgttta
     3061 cacgaaagtt tggaaaaagc tttttagaat tttccaataa ttcggatcag atgttccgat
     3121 acgatatctc gcggccagct gaaatatcgg aaggagcaaa attgatcttt ttataccacc
     3181 ttgattgaag tgaagattta attggcaaca caaatgttag gtggaaaact tcctgatgtt
     3241 tggatcattc gcggccattg ggcggaaact taatagttgt gatataatta ctagcggctc
     3301 cccactttaa aacaacactt tttcacgagg taagcctgag ctttttttat ttatctttcg
     3361 gctcgtacaa ttccatgtct tcgtcgcgac aactcacagc tattatgttt gcagatattg
     3421 ccggttatac ttctttcatg caagaagatg aggcgatggc gttagagcta agaaacaagt
     3481 tcctgcaaaa gatcggtgaa gaaacatccg ctcataacgg ccggatactg gatattaaag
     3541 gtgacggtgc attgtgcagc tttgccagca ccatcgaagc tgtaaaagca gcgatcagcc
     3601 tgcagcttga aatgcaggct gctcccgt
//
LOCUS       DASQJI010000774         7968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2881237,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000774 DASQJI010000000
VERSION     DASQJI010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7968
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2881237"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2475)
                     /locus_tag="VEV83_20480"
     CDS             complement(<1..2475)
                     /locus_tag="VEV83_20480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK47571.1"
                     /translation="MFRKLRGVLLATAFLLYSNILFAQKTITGRITSSNDQPVVGATI
                     TVKGTNVATLADTSGNFSVFIPAGSNILTISSLGYATREVKIDNRNMVSVSLEIAIAD
                     LDEVVVTGYVAEKKKEITGAVSVVNVKDMKQMPVGTGEEALQGRASGVTIISSGQPGG
                     ASEIRIRGLTTFGNNQPLIIVDGIRGDLHDINIQDIESIQVLKDAAASIYGVAGANGV
                     IIVTSRKGSGKPKVSFDAYYGVTTPGQGYEMANTQQHANAIWQQQRNSGIANPSSKQY
                     GDGVNPVIPDYIQTLAWLNSDSELVNYGYTLCNCSRDSVVNPMFYDINTAQITRASKT
                     GTNWYDVITRNAPTQSYNLSVSSGSEKNSYFFSVNYLDQEGIADFQYLKRYSIRANTQ
                     FNIKNVVRVGENAYIYYKQNPTYFNQSEGSPFLTAFVESAIIPVYDIMGNFAGTKSQD
                     LGHASNPYADIYRTKDNRTQDWVLTGNLYGEVDFLKHFTARTSFGGITDNSYYYNFGY
                     VGYENAEGNTGDNSFDEGAAYNTSWTFTNTLTYTNVFGNDHSVRVLVGTEAVDNYYRY
                     QHSTRSVYFSEDPDYWTVNSGTGTQSNEGGASETTIWSYIGKLEYGYRGKYLLNGSLR
                     RDGASVFAPDRRFGWFPGVSGAWRLSQENFFRNISFIDELKIRYSWGKLGTFGDVAPT
                     NSFNLYSSRLGKSAYDIYGNSTRPYAGFYKSYIGNPPTTWEGDIISNVGLDATLFKKK
                     LDFTIEWYKKKVTGLLFPAEGVTWDRIFTGDADLPYVNIASNDNTGLDFNATYHGTVS
                     NNFHFDITGIFTSYHNKIVDIPASIYF"
     gene            complement(2641..4572)
                     /locus_tag="VEV83_20485"
     CDS             complement(2641..4572)
                     /locus_tag="VEV83_20485"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47572.1"
                     /translation="MAAVKKYLLFVFLVASVEVSYGQPAAALTIQLSRKDLDSVRHLL
                     LIEKRDSARVDLLNTLARGSNHIGNIDSMAFYANQALRLAKKINYVNGQSEALNYLTR
                     FLWRIGNYPEALQTALKSLHLATLTRDTVAVFNALRSVSLTYDEMKDYRMVLVYAART
                     RELVHSGYQLFKGKSNQAFHSQAGYLTLMGDAFEGLNQMDSALYYRRLAYQAASFLNV
                     DQIIALTSEALGRNFLKTNRYDSAYFFYRICIAHAQKTKLRYDLAASSQLGLARMFER
                     SNRLDSALFYAKLSLKTFQRMSFIPEQLDAATFLNQLYAKLHRFDSAYAYQQITIALN
                     DSLYGKEKIKAADSIKYDEVLREEQVQQEKLRQQIKEANLQKQLQQVQAEKQSLVKNI
                     LLISIAIIIVFAVVLLRNIMLKRRNEKIESEKKQADLRQQKGEVEMQALRAQMNPHFI
                     FNSLNSINRFILKRQSGEASEYLTKFSRLIRMILNSSASASVTVAEDLEALKLYLELE
                     RLRCDDKFSFEIECEPDMDIDYIQIPPMLLQPFVENAIWHGLMNKESEGHLWINIDQE
                     DSALICTITDDGIGRKRAAELNGGSVKHKSMGMKITESRIQMMQKMNGDGKSVEITDL
                     VDADGNAAGTEVMLRIPVE"
     gene            complement(4823..7444)
                     /locus_tag="VEV83_20490"
     CDS             complement(4823..7444)
                     /locus_tag="VEV83_20490"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK47573.1"
                     /translation="MKQKNYLTSLIVLAFVCDQTVLAQTNVFPSTGPAGIGTTTPNVS
                     SLLDIVSTSKGVLIPRMTKNQRDLIGSPAIGLLIYQTNSTPGFYYYDGASWTAVSPAA
                     ANRSLSNLTAPTAINKNLLPGTTNSIDVGSSANSWRNVFAKSFNLDNNTAFFAPGNNN
                     LFAGGGNSLVTGFSNTGFGVNALPFLTSGLENTAVGLNTLFNDTSGSSNTAIGSLSMQ
                     SNTIGGFNTAVGVQALVSNTSGSYNVAVGVPSMYSNTTGSANTAVGLETMFTNTTGYS
                     NVAVGAYALFSNTQGHNLVAVGDSALYHQSLSSINAYYNTAVGSKALYANTSGYENTA
                     LGSSSLLSNTTGKFNTALGGFALQANTTGDENTAVGLGAMNVNTTGSFNTATGGDAMT
                     LNNTGSFNSAYGSGALHYNTTGAGNTSLGFNSNYFNSTGYSNVSVGTKALFNNTVGHN
                     LVAVGDSALYQSSSSQLNTAIGSKTLYSNTAGSSNTAVGSSSLYSNTTGTSNVAVGNA
                     ALASAQQNSYNVGVGDSVLYKYNDSGFPDYMVAVGKDALFNNTTGYLNTAVGGYALKT
                     NKFGYQNSALGTFADVNSNSLFNATAIGYNAIATASNQVMLGNTSVTSVIAGGSVVIV
                     SDKRFKKNIKENVPGLEFIKLLQPVTYNYDVHALNAHISGDATRGRDASSTRNQGNPD
                     EEAINRKEKKSYTGFIAQDVEAAANKLHYDFSGVYKPANDKDAYGLSYSDFVVPLVKA
                     VQQLSDENDTLKKELNDIKMMIANMQNSTTAGSSSQQTSVQVVELSMLAKLEQNVPNP
                     FKSSTTINYFLPINKGNAFINFYSSAGALLKSQKLDAEGKGLIELKTDALPSGTYQYS
                     LIVDGKIVDTKKMVMAK"
BASE COUNT         2114 a         1834 c         1699 g         2321 t
ORIGIN      
        1 aaaataaata ctagctggta tgtcaacaat tttgttatga taagacgtga aaatgccggt
       61 aatgtcaaaa tggaaattat tgcttaccgt accatgataa gtggcattaa agtcaagacc
      121 tgtgttatca ttgcttgcaa tgttcacata aggaagatca gcgtcaccgg tgaagatcct
      181 gtcccatgta acgccctctg ccgggaacaa caggccggta actttctttt tataccattc
      241 gatagtgaag tcgagttttt tcttgaaaag cgtggcgtct aacccaacat ttgaaataat
      301 atcgccttcc catgtcgtcg gaggatttcc tatgtagctc ttgtaaaaac ctgcatatgg
      361 cctggtactg tttccgtaga tatcgtaagc tgatttaccc agcctcgaag aatacagatt
      421 gaacgaattt gttggcgcca cgtccccgaa cgtacctaat ttaccccagc tataccggat
      481 ctttagctca tcaatgaaac ttatgtttct gaagaagttt tcctgggaaa gccgccatgc
      541 tccggaaacg cccgggaacc atccgaacct ccggtcgggt gcaaaaactg atgcgccgtc
      601 tctccgtaag ctgccattga gcaggtactt tccacgataa ccgtattcca gtttgccgat
      661 gtaagaccag atggtcgtct cactggcccc gccctcgttg gattgcgttc ctgtgccgct
      721 attgacagtc cagtaatcag gatcttctga aaaatagaca ctgcgggtgc tatgctggta
      781 cctgtaataa ttgtctacgg cttcggtacc tacaagcacc ctaacactgt ggtcgttgcc
      841 gaagacattg gtataagtta atgtgttagt gaaggtccag cttgtgttat aagctgctcc
      901 ttcatcaaat gaattgtcac ccgtatttcc ttcggcgttc tcatagccta catagccaaa
      961 gttgtaatag tagctattat cggttatacc accgaagctg gtgcgtgctg taaaatgctt
     1021 cagaaagtca acttctccat acaaattccc ggtcagaacc cagtcctgcg tgcggttgtc
     1081 tttagtacga tagatatctg cgtacggatt gcttgcgtgc ccaaggtcct gcgacttcgt
     1141 tccggcaaaa ttgcccatta tatcatacac cgggatgatg gcagattcga caaaggcggt
     1201 aagaaaagga cttccctcac tctggttaaa gtatgttgga ttttgtttgt agtagatgta
     1261 cgcattctcc cccacccgaa ctacattctt aatattgaat tgtgtattcg cccttataga
     1321 atatcgtttc aaatactgaa aatccgcgat accttcctgg tccaggtaat tcacagaaaa
     1381 gaagtacgaa tttttctctg aacctgagct taccgacaaa ttatagcttt gcgtgggagc
     1441 atttctcgtg ataacatcgt accaatttgt gccggtcttg cttgcccttg taatttgcgc
     1501 agtattgata tcatagaaca ttgggttaac cacagaatca cgcgagcaat tgcagagtgt
     1561 atagccataa ttcactaatt cgctatcgga atttagccag gcaagcgttt gtatgtaatc
     1621 ggggatcacg ggatttaccc cgtcaccata ttgcttacta cttggattag caatacctga
     1681 gttacgctgt tgttgccata ttgcatttgc atgctgctgt gtgttcgcca tctcgtatcc
     1741 ctggcctggc gtcgttaccc catagtaggc gtcgaaactt accttaggtt ttccggatcc
     1801 ttttctcgag gtaacgataa taactccatt tgcgccggct accccgtaga tagaggcggc
     1861 cgcatcttta agcacctgta tcgattcgat atcttgaata ttaatatcgt gcaggtcgcc
     1921 tcttatccca tcaacaataa taagtggttg gttgttgcca aatgtggtaa gaccacgtat
     1981 gcggatctcg ctcgctccac caggttgtcc tgaactgata atcgtaacac cggatgcgcg
     2041 tccttgcaag gcttcctcgc ctgttcctac cggcatctgc ttcatgtcct tcacattcac
     2101 caccgatact gctccggtaa tttccttttt cttttcagcc acatagccag taacgaccac
     2161 ttcgtctaaa tcagcgatcg caatttctaa agaaaccgaa accatattac gattatcaat
     2221 tttcacctcg cgggtggcat accccaaaga agaaattgtt agaatattac tgccggcagg
     2281 aataaaaacg gaaaagtttc ctgaagtatc cgcaagtgta gcaacgttag tcccttttac
     2341 cgtgatcgtt gcacccacaa cgggctggtc gtttgaactt gtgattctgc cggtaattgt
     2401 tttttgtgcg aatagaatat tagaatacag tagaaatgct gttgccaata aaactccgcg
     2461 tagctttcta aacatggcaa acgactttta aaatatagcg cacagtttta accgaaaagc
     2521 caaatacaaa gtaccaacaa attgaaactt gacaaaaagc cggtgagtaa gacgcgatgc
     2581 aacaaagtaa cctgcgaaaa cgagcgagta gtctgccgcc gatgatctgc ctgtgaattt
     2641 tcactcgact ggtatcctca acatcacttc ggtccccgcc gcatttccat cggcatccac
     2701 gagatctgtt atctcaactg atttgccatc tccattcatt ttttgcatca tctggatcct
     2761 gctctctgtg atcttcatgc ccatcgattt atgtttcacg gatccgccat tcaattccgc
     2821 tgctcttttt cttccgatgc catcatcggt gatcgtgcaa atgagcgctg aatcttcctg
     2881 gtcaatgttt atccataaat ggccttcact ttctttgttc atcagcccat gccatatcgc
     2941 attttcaacg aaaggctgaa gcaacatggg gggtatttgt atgtagtcaa tatccatgtc
     3001 cggttcacat tctatttcaa aactaaattt gtcgtcgcaa cgaagtcttt caagttcgag
     3061 gtacaatttc aacgcttcaa gatcttcagc aactgttacg gaagcacttg ccgagctgtt
     3121 caatatcatt cttatcaacc gtgaaaattt cgtcagatat tcagatgctt cgccgctctg
     3181 ccttttaaga ataaaccgat tgatggaatt aagagaattg aaaataaaat gaggattcat
     3241 ctgcgcgcgc aaagcctgca tttccacttc tcctttttgt tgccgcaggt ctgcttgttt
     3301 tttttcgctt tcgatctttt catttcttct cttgagcata atgttgcgga gtagcacaac
     3361 cgcaaagaca attataatcg caatgcttat cagcagaata ttcttaacca gtgattgttt
     3421 ctctgcctgc acctgctgta attgcttttg aagatttgct tcttttattt gttgcctgag
     3481 tttttcctgc tgcacttgct cctcacgcag tacttcatca tatttaatgc tgtcggcagc
     3541 ctttattttt tcctttccat acaagctatc atttagagcg atcgttattt gctgatatgc
     3601 atatgcactg tcgaagcgat gcagttttgc atataactgg tttaaaaaag tagccgcgtc
     3661 cagttgttcc ggaataaagc tcattcgctg aaaagttttt aaagaaagct ttgcatagaa
     3721 taaagccgaa tcaagccggt tgctgcgttc aaacatgcgc gcgagtccta attgcgagga
     3781 cgcggcgaga tcataccgga gttttgtttt ttgagcatgc gcgatacaaa tgcgataaaa
     3841 aaaataggcg ctgtcataac ggtttgtctt caaaaaattt cttccaaggg cttccgaagt
     3901 gagcgcgatg atctggtcga cgttcaaaaa tgaagcggcc tggtaagcca accgcctgta
     3961 ataaagtgca gaatccattt gattcaatcc ctcaaaggca tcccccatca gggtcaggta
     4021 cccggcctgg ctgtgaaacg cctggttaga tttgccttta aaaagttgat aacccgaatg
     4081 aacaagttcc cgggttcgcg ctgcataaac cagcaccatc cggtaatctt tcatttcatc
     4141 gtaggttaat gaaacgctcc tcaacgcatt aaaaaccgcg accgtatccc tcgtcaacgt
     4201 tgcgagatga agactcttta atgcggtctg cagcgcctcg gggtaattgc caatgcgcca
     4261 taaaaaccgc gttagataat ttaatgcttc actttgacca tttacataat tgatcttttt
     4321 tgcgagacgc agcgcctggt ttgcataaaa agccatcgaa tctatgttgc ctatgtgatt
     4381 ggatccgcgc gcgagtgtgt ttaacagatc aaccctcgca gaatctcttt tttcaattaa
     4441 gagcaaatgg cggacgctat ccaggtcctt acggcttaac tgaattgtga gcgccgcagc
     4501 aggttgccca tatgagactt caacggaagc aacgagaaag acgaagagca agtatttttt
     4561 tacagcagcc atagcgtacc ggtcgcaatg atctatttaa agttactcat taaattattg
     4621 aatacgcaca gcgcgtaaac tatgcaaacg tgacctttta acagacggca aatgagtaac
     4681 gttcggatat tgccggtaac ctgcggtact gggtaagcag caggtttacc gctaaaacca
     4741 attttacctt gattcagctc gaaataattc ctggacgcaa gtcgtttcag gaccgtcagc
     4801 ccggttcaca cgtcattctt aattattttg ccatgaccat tttcttcgta tcaacgatct
     4861 ttccatcaac aattaatgaa tattgatatg tgcccgatgg taatgcatcc gttttcaatt
     4921 caattaatcc tttgccttcg gcatccagct tttgcgactt tagcagcgcg cctgcagatg
     4981 agtagaaatt tataaacgca ttgcccttat ttatgggtaa gaaatagttg atcgtagtac
     5041 tgctcttgaa gggattcgga acattttgtt cgagttttgc caacatacta agttccacaa
     5101 cctgcactga tgtctgttgc gatgaagaac ctgcggtcgt tgaattctgc atgtttgcga
     5161 tcatcatttt tatatcgttc agttcttttt tgagcgtatc attttcatca gaaagttgct
     5221 gcaccgcttt gaccaatggc accacaaaat cagagtagct tagtccataa gcgtctttat
     5281 cgtttgcggg tttatatacg ccgctaaaat cataatgcag tttattcgcc gccgcttcca
     5341 cgtcctgcgc gataaaaccg gtgtaggatt tcttttcctt cctgttgatc gcttcttcat
     5401 ccggatttcc ctggttcctg gtagaagatg catcacggcc gcgcgttgca tcgcctgaaa
     5461 tatgtgcgtt cagcgcatgc acatcatagt tgtacgttac aggctgcaac aactttataa
     5521 actcaaggcc cggcacattt tctttgatat tttttttgaa acgtttatct gaaacaatta
     5581 ctacgctacc gccggcgatc acggaggtaa cagaagtgtt tccaagcatt acctggttac
     5641 ttgcagtagc gatcgcattg taaccaattg cggtggcatt gaacagtgag tttgaattca
     5701 cgtcggcgaa tgttccgagt gcggagtttt gatacccaaa cttattcgtt tttaaagcgt
     5761 atcctcctac cgccgtattt aaatagcccg tggtgttgtt gaacaacgca tcttttccaa
     5821 cagcgaccat ataatcgggg aaaccactat cattatattt atacagtact gaatcaccca
     5881 cgcccacatt ataactattt tgctgcgcgc ttgccagggc tgcatttcct accgcaacgt
     5941 ttgaagttcc ggttgtgttt gaatataacg atgatgatcc gacggcggtg tttgacgagc
     6001 ccgccgtatt cgagtacagg gtttttgaac ctattgcagt attgagctga cttgaagaag
     6061 attggtacaa cgcagaatct ccaaccgcaa cgaggttatg tccaaccgtg ttattaaaaa
     6121 gagccttcgt gcccacactc acattgctgt atcctgtcga attaaaatag tttgaattaa
     6181 aacccagcga ggtattgcct gcacctgtcg tattataatg caaggcaccg ctcccgtatg
     6241 cgctgttaaa tgaaccggtg ttattcaatg tcatggcgtc tccgcctgtt gcggtgttga
     6301 aagaaccggt tgtgtttaca ttcattgcac ccagtcctac ggctgtattt tcgtcgccag
     6361 ttgtgtttgc ctgtaatgca aatcctccga gagcagtatt aaattttcct gtggtattgg
     6421 acaatagtga cgatgatccc agcgccgtat tttcataacc tgacgtgttc gcgtacaatg
     6481 cttttgaccc cactgccgtg ttataatatg cattgataga gctaagcgac tggtggtata
     6541 acgcggagtc gccaacagcg acgaggttgt gcccttgtgt gttactgaaa agagcatacg
     6601 cacccaccgc gacattgctg taacctgtag tgtttgtaaa catcgtttct aaaccgactg
     6661 cggtatttgc tgaaccggtc gtattagaat acatcgatgg aactccgaca gcaacattat
     6721 aagacccgct ggtattgcta accaatgcct gcacgccgac tgcggtattg aaaccaccaa
     6781 tcgtattgct ttgcatgcta agtgaaccga ttgctgtgtt cgatgagccg gaggtatcat
     6841 tgaacaatgt gtttagacct acggcagtgt tttcaagtcc cgaagtaaga aaaggcaagg
     6901 cattaacgcc aaatccggtg tttgaaaaac ctgttaccaa agaattacct ccgcctgcaa
     6961 acaagttatt attgccggga gcaaaaaacg ccgtattgtt atcgagattg aaactcttcg
     7021 caaaaacatt ccgccagcta tttgccgatg atcctacatc aatagagttt gtggttccgg
     7081 gcagtagatt cttattgatc gcagtaggag cagtgaggtt agaaagcgac cggtttgcag
     7141 ccgcaggcga gactgcagtc cacgatgccc cgtcataata ataaaatccg ggggtactgt
     7201 ttgtttgata tatcagcaag cctatggcag gtgagccgat gaggtctcgt tggtttttcg
     7261 tcatgcgggg aataagaacg ccttttgacg ttgacacaat atccaaaagc gatgaaacat
     7321 tcggcgtggt agtgccaatg ccggccgggc cggttgaagg aaaaacgttt gtttgcgcaa
     7381 gcactgtttg atcacagacg aaagccagta caatgagact ggttaagtag tttttttgtt
     7441 tcataaaagt tgaagttttg aatcacagat gaaagttgat caaaattgaa attgatcaaa
     7501 tgcacacgtt ttattgccgc ggccgcatct taaaacggcg gctgttgttg tcaaactttt
     7561 ttcataagaa acaacaacgc ggtgtcacaa agaatttaca gaaatgacaa ctgaaacggt
     7621 aaaggcacgg cattgcacat aagcattgga tgatttcgcg cccaaactac aaaaaatcac
     7681 gaacaatgaa tgacaacaaa aaatcgggaa gaatttatga ttgtggaccc cattgttgag
     7741 ctaccatgtt gccagcagga atgccgtatc aatatgcgca tataataact aaaatggtac
     7801 agttataaga gggacgtcgt gaaaacgatt aatatgatca cgtttcattt aaattccgga
     7861 attcctgtca taaggtatga tttgatccca ttcgtcggcg gacgaacgcg cgacaaacgc
     7921 gacaaccggt tctgtgtcgc ttatattgaa tacttcgtga ggaacgcc
//
LOCUS       DASQJI010000775         8192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1342866,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000775 DASQJI010000000
VERSION     DASQJI010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8192
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342866"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1445
                     /locus_tag="VEV83_20495"
     CDS             <1..1445
                     /locus_tag="VEV83_20495"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK47574.1"
                     /translation="EWTFTSFLEVFALSELTTDEAIAPTRGNNWDDNGIWRVLHQQKY
                     DPNNSVIHDCFKSLSGVVYAATDMLQYKPTARQQAEARFLRAWAMYWLFDMYDQVPYR
                     DPGENTVQPARVRKGIEALQYIIDEVTAVEADLPPGPADRANRYAAMALLMKCYLNKA
                     VYVNRVNPPPPDKADLNKVIKFADSIIESGQFTFSENYFDNFSPTNSTDSHENIFTQA
                     SSFDGSFAIAGAWLTVLNYAQHGFNGFSTLSDFYNKFDSTDKRRGFAYDYSTSPPNPG
                     RRINVGFLINQQYDLCVDTPLTSSGTNQANPIPVIFTPDVHNTEPGPNIEMPGIRPIK
                     YPPDWLNCDAIVPPPSDAFRNPPSNEFVYLGFSDVLLMKAEAILRGGTPTNAGAYGIT
                     PTSIVNAIRTDTSRGALPLASVSLENLLDERGRELWWGNWRRQDMIRFGTFLKPFEEK
                     EYTSDSKYLLFPIPYEQLGVNPYLEQNPGY"
     gene            1506..4880
                     /locus_tag="VEV83_20500"
     CDS             1506..4880
                     /locus_tag="VEV83_20500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47575.1"
                     /translation="MTLVIRICLVSILLISAENVFAQETPLDFNLVTGASGITLGKIN
                     GITQDKWGYIWFADQTQQCLTRYDGYRMKTYRHNPTDPTSIEPGSMECIAVDSSGNIW
                     FPTEKGVDKFDPRTNIATHYHFDLRSSCKGGFIAQILVDHLGLIWLGTSEGLYNLDEK
                     TGNFTCYPHRDNDSTSLSYNVVRALYEDHEGIIWVGTGSPFDPSREGGLNKFDRKTGK
                     FTRFLHNDKDPHSLINNKVRAIFEDGKGVFWVGTQGDGLHIMDRKTGKFDRLTYDPSH
                     PEKLSRPPVKKGNDFDQITFITEDLSGAIWIGTFLEGITRYDPQTKQLTRYKGEKSKE
                     HGFTDSTTWCAFVSHDGSLWISTEATSVYRVDPLQINFLKTFLDETAWTFVEDSSHIV
                     WVGLLSNAIARIDRTDPVHETINKYIVDPSLYYDLAVGGIYPLSEDTFLLATDKGIYV
                     FDPKNKNPVKADWGREISKKPASPIFKDSRGIFISITNGNNGKIYVGGLGLYTLDTQT
                     GKLTQFKRNLADSTCLWIDTVTTIQKDIAGNMWVGGEHRGIDLLDTKTNKFSHYLRRL
                     TVYAIYQDQEGTVWAGTELGLYRKKKNETDFTLFTSEQDDLRSLSVSGLIGDEDGNIW
                     GASSSGIIKIDPLANEINFYGIRFGVNDLMPQTRQEAFRAHDGRIFLGCTNGYYSFDP
                     RKIVNHVAPQIILTDLKIDGHPVMTGKNGSIQNAIEEATQITLKHNQNIFSIDFAAIH
                     FSDPDNNVLQYKLEGYENTWRNVSLEKTAYYFNIPHGQYTFKIRAWSSYGMMTEKAVE
                     VTVLPPWWQTWWAYTVYTILFISAIWVFISWRTGRLKEEKIKLEEKVADRTKELKEEK
                     EIVESTLAELRSTQAQLVQSEKMASLGELTAGIAHEIQNPLNFVNNFSEINKELLAEM
                     NNEMKAGNFDEARTIAMNIEENEDKIIHHGKRADAIVKNMLQHSRQTKSIKEPTDINA
                     LCDEYLRLSYHGLRARDKEFNATLQTDFDATLGKINIIPQDIGRVLLNLFNNAFYATS
                     EKQKAEGEGYEPTVLVRTKKTDGKVEIRVKDNGNGIPQKVIDKIFQPFFTTKPTGQGT
                     GLGLSLSYDIIKAHGGEIKVESNEREGTRFTISLPT"
     gene            4954..>8192
                     /locus_tag="VEV83_20505"
     CDS             4954..>8192
                     /locus_tag="VEV83_20505"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47576.1"
                     /translation="MRRYIIIIFLSFFIVHTHAQNKSLRFEHIGIEEGLSHNRVLAIF
                     QDSKGYMWFGTEDGLNKYDGYSFTKYQFDPFDSSSLSSNGIYTIWEDKYGSIWVGTFE
                     GMCRFDRSTEKFTRFKPSPGAKFSDPNITSFNEDSDGMIWAGSFGGLCRFDRQNGIFL
                     PDDFEIKGVFCIYKDKAGTLWVGNSTGLHRINLTAKKAGTPAAVSFTPYHDPDNPNGL
                     IRSIFEDHDGMMWLATSNGLKSFDRKTKTFKRYLHDPKNIHSISTNNFEWLGTLIQED
                     KEGNLWIGTGEGLNKLSSDRRVFTVYRHNPKDTFTLNSDVVISLHIDKAGILFAGTWG
                     GKLSKVNLDPKPFGLRRRDPGNINSLSSNEVTSILEDSSGIIWIGTYDGGLNRWNRST
                     NEFTHFRHDSSNPATLTSDTIFALLNDQHGHIWVCNGDVLSKLKNQNGEFIHYYTNLR
                     DDKSEFQPIILSITQDREGFIWLGTGNGLKKFDERKGEFIEHYYYDPADSSGISDYGS
                     SAVFADSRDNIWVGYSSRATDRFDKKSGRFIHYKHDSRNSTSISSNIVKSFFEDSRRN
                     LWIGTLSGGACYFDYREGKFTTLTDKHGLPANNVYSLLTDNENNLWLGTSNGLSRYDP
                     ATNSFTNYYFKDGLQGNVFVSGDGGAEKSKGACFKGSDGTLYFGGNNGFNFFDPEQLK
                     TDSQKAPVVITQFKLFDSLVKGANELKKIILNYDENYFSFEFASLSYDNPAKNQYQYK
                     LEGADKDWISSGPRRYAEYTNIDPGTYTFKVKGTNNDGVWNEEGASITIIIKPPWWRS
                     WWAYSLYGLLIVAAVYAVYRYQRQRLIQRERDNARAKELAQAKEIEKAYTELKATQAQ
                     LIQSEKMASLGELTAGIAHEIQNPLNFVNNFCEVNGELIEELLDERLKVKTERDESLQ
                     DEIINDLKANLEKIHHHGRRADAIVKGMLQHSKQTKGVKEPTDINALVDEYLRLSYHG
                     LRAKDKNFNVTLQTDFDPDLSSVEGKINVVPQDIGRVLLNLYNNAFYATSEKLAAPGS
                     QLEANSAPYVPTVTIVTKKLQNKIQIIVSDNGSGISQNIIDKIFQPFFTT"
BASE COUNT         2657 a         1562 c         1778 g         2195 t
ORIGIN      
        1 tggaatggac tttcaccagc tttcttgaag tatttgcact ctccgaactt acgacagatg
       61 aagcgatagc accgacgcgc ggaaataatt gggatgacaa tggaatatgg cgggtgcttc
      121 atcagcaaaa atatgatccc aataattctg ttatacacga ttgttttaag agcctgagcg
      181 gcgttgttta tgccgcaaca gacatgcttc aatataagcc taccgccaga caacaagctg
      241 aagcaaggtt tctacgggca tgggccatgt attggttgtt cgatatgtac gaccaggtac
      301 cttaccggga tccgggcgag aataccgtac aaccggcaag agttagaaag ggaattgaag
      361 cattacaata cattatcgac gaagtgaccg ccgtggaggc tgaccttcca cccgggcctg
      421 cagatagggc aaatagatac gctgcaatgg cattgctgat gaaatgctat ttaaataaag
      481 cggtttatgt gaacagagtt aatcctccac ctcctgacaa ggctgatttg aacaaggtga
      541 tcaaatttgc tgattcaatt attgaaagtg gtcaatttac atttagtgag aattatttcg
      601 ataatttttc tccaacaaat agcaccgata gccacgaaaa tatttttacg caggcaagta
      661 gctttgatgg tagctttgca atagctggcg cttggctaac ggttttgaat tatgcgcaac
      721 atggctttaa cggcttctcc acgttatcgg atttttataa caagtttgat tcaacagata
      781 aacgcagagg atttgcgtat gattattcta cttctcctcc taatccgggc cgcaggatca
      841 acgtcggatt tttaattaac caacagtatg atctatgcgt agacacccct ctaactagtt
      901 ctggcacaaa tcaggcaaat ccaattcctg taatttttac gccggacgta cataacaccg
      961 aaccgggacc aaacatagaa atgccgggta tcaggcccat aaaatatccg ccagactggt
     1021 taaactgtga tgctattgtt cctcctccaa gcgatgcctt tcgcaatcct ccgagcaatg
     1081 aatttgtgta tttaggtttt tccgatgtat tactgatgaa agccgaagct attctaagag
     1141 gaggtacacc aacgaatgcg ggggcttatg gcattacacc aacttccata gttaatgcta
     1201 ttcgaaccga tacatcgcga ggtgcattac ccttagcttc ggtgagcctt gaaaatttat
     1261 tagatgaaag aggaagagaa ttatggtggg ggaattggcg aaggcaggac atgatccgct
     1321 ttggaacctt tcttaaaccg ttcgaggaaa aagagtatac aagcgattcg aaatatcttt
     1381 tgtttcctat tccatacgag caattaggag tcaaccccta cctggaacaa aatcccggct
     1441 attaagaagt tggacgcaca tttattaatc acaaacttta tcataaattc acttcaaatg
     1501 atttcatgac actggtcatt cgcatttgcc ttgtttcgat cctccttata tccgcagaga
     1561 atgtattcgc tcaggaaacg cctttagact ttaaccttgt aacaggtgct agtggaataa
     1621 cacttgggaa aattaatggc attacgcagg acaaatgggg atacatatgg tttgctgatc
     1681 aaactcagca atgcctgaca aggtatgatg gttaccgcat gaagacatat cgccacaatc
     1741 caacagaccc tacctcaatt gagccgggtt ccatggaatg tattgccgtc gattcatcag
     1801 gcaatatctg gtttcctact gaaaaaggag ttgataaatt tgatccccga acaaatattg
     1861 caactcatta tcattttgat ttaagaagtt cttgtaaggg tggctttata gcccagatcc
     1921 tggtcgatca tttaggctta atatggttag gcacaagtga aggtctttat aatcttgatg
     1981 aaaaaacggg aaattttact tgctatcctc atcgcgacaa tgattcaaca agtcttagtt
     2041 ataatgtagt aagggctttg tacgaagatc acgaaggaat tatatgggta ggaacgggta
     2101 gcccattcga tccgtcaaga gagggaggtt taaataagtt tgacaggaaa acaggaaaat
     2161 tcacccgctt tcttcacaac gataaagatc ctcacagcct gatcaataat aaggtcaggg
     2221 cgatctttga agatggcaaa ggcgtttttt gggtaggcac acaaggagat ggtttacaca
     2281 ttatggacag aaaaaccggg aaatttgaca ggcttactta tgatccttct catcctgaaa
     2341 agctcagcag gccacccgta aaaaaaggaa acgatttcga ccagatcact tttattacag
     2401 aggatctttc cggggcaata tggataggaa cttttttaga gggcattaca agatacgatc
     2461 cgcaaacaaa acaattaaca agatacaaag gagaaaaatc aaaagaacat gggtttacag
     2521 acagtactac atggtgtgcc tttgtttcac atgatggtag tttgtggatt tccacggaag
     2581 ccaccagtgt ttatcgtgtg gaccccctac aaattaattt tttgaaaact tttttagatg
     2641 aaactgcctg gacctttgtg gaagattcat ctcatatcgt gtgggttgga ttactttcaa
     2701 acgcaatagc gcgaattgac cggacagacc cggttcatga aactatcaac aagtatattg
     2761 ttgacccatc actttattat gatttagcgg tcggtggtat ctatccttta agcgaggata
     2821 ccttcctgct tgcaactgat aaaggaatat atgtttttga cccaaaaaat aaaaatcccg
     2881 taaaggctga ctggggtaga gaaattagta aaaaacctgc ttctcctatt tttaaagata
     2941 gcagaggaat ttttatatcg ataacaaatg gtaataacgg aaaaatttat gtaggtggct
     3001 tgggtcttta cacattggat actcaaacag gcaaattaac ccaatttaaa agaaacttag
     3061 cagacagtac atgtttgtgg atcgataccg taacgaccat acaaaaagat attgctggta
     3121 atatgtgggt tggcggtgag catcgtggca ttgacctgct tgacaccaaa acaaataagt
     3181 tcagtcatta ccttcggcga ttaacggtat atgccattta tcaggaccag gaaggaactg
     3241 tttgggcagg caccgaatta ggtctctatc gtaagaaaaa aaatgaaacc gactttactc
     3301 tctttacaag tgaacaagat gatctaagat ctttatctgt aagtggttta ataggcgatg
     3361 aagatggcaa tatttgggga gcctcatctt cgggtatcat taaaatagat cctttagcga
     3421 atgagatcaa tttttatgga ataagattcg gcgttaatga tttaatgcct caaacaaggc
     3481 aggaggcctt tcgggctcac gatggacgaa tatttttggg ttgtacaaac ggttattatt
     3541 ccttcgatcc gcgaaaaatt gtcaaccatg ttgcacctca aatcatactg actgatttaa
     3601 aaattgacgg gcatccggtt atgacaggaa agaatggttc aatacaaaat gcgattgaag
     3661 aagcaactca aataacatta aagcataatc aaaatatctt ttcaatagat tttgctgcaa
     3721 ttcatttcag tgatccggac aacaatgttt tgcagtataa gcttgaagga tatgaaaata
     3781 cgtggcgaaa tgtaagcctt gaaaaaacag cttattattt taacatccct catggtcaat
     3841 atacttttaa aataagggcg tggagcagct atggtatgat gacggaaaaa gcagttgaag
     3901 taactgtgtt acctccctgg tggcaaacat ggtgggctta cacggtatat accattttgt
     3961 tcataagtgc tatatgggtt tttatcagtt ggcgaacagg aagattaaaa gaagaaaaaa
     4021 taaaacttga agaaaaagtt gccgatcgta caaaggaatt aaaagaagaa aaagaaattg
     4081 ttgaatctac tttagccgaa ttaagatcaa cacaggctca acttgttcaa tctgaaaaaa
     4141 tggcttcgct cggcgaactt accgcaggta ttgcgcacga gattcaaaac ccgttgaact
     4201 tcgtgaataa tttctcagag atcaataaag aattattggc tgaaatgaat aatgaaatga
     4261 aggcagggaa ttttgatgaa gcgcgaacaa ttgctatgaa tatcgaagaa aatgaagata
     4321 agatcattca tcatggcaaa cgggcagacg caattgtaaa aaacatgttg cagcattcac
     4381 gacaaacaaa aagcataaaa gagccaacag acattaatgc cttgtgcgat gaatacctga
     4441 gattaagtta ccatggcctt cgtgcaagag acaaagagtt taatgccact ttgcaaaccg
     4501 attttgatgc aacgctcgga aagataaata taataccgca ggatataggg agggtgctgc
     4561 tgaatttgtt caacaatgca ttttacgcaa caagtgaaaa acaaaaggca gaaggcgaag
     4621 ggtatgaacc aactgtgttg gtgcgcacta aaaaaacgga tggcaaagtt gagatacgtg
     4681 taaaggataa cggcaatggc attcctcaaa aagtaataga taaaattttt caaccattct
     4741 ttaccacgaa gccaacagga cagggaacag gattgggatt gagtttgagt tatgatatta
     4801 ttaaggccca tggcggagaa ataaaagtgg aaagtaacga acgtgaagga acacggttca
     4861 ccattagttt gcccacatag ttactcccct ttaggtccgc ccggatgacg ggggtcgggg
     4921 gtaaacacta attttaagga acgaattttt aaaatgaggc gatacatcat aatcatattc
     4981 ctttcttttt tcatagttca tacgcatgcc caaaacaaaa gcctgcgttt tgaacatata
     5041 ggcatagaag aaggactctc acacaataga gtattggcca tattccagga tagtaaagga
     5101 tatatgtggt ttggtacgga ggatggttta aataagtatg atggctattc ttttaccaaa
     5161 taccagtttg atccgtttga ttccagttca ctttcttcaa atggcatata taccatctgg
     5221 gaagataaat atggttcgat ttgggtggga acatttgaag gaatgtgcag gttcgacaga
     5281 tccactgaaa agtttacccg ttttaaacct tctcccggtg caaaattttc tgacccgaat
     5341 ataacttctt ttaatgaaga cagtgatggt atgatatggg cggggagttt tggagggcta
     5401 tgccgtttcg atagacaaaa cggaattttt ttgcctgatg attttgaaat aaaaggtgta
     5461 ttctgcattt ataaagacaa ggccggtacc ttatgggtag gcaattcaac cgggctgcac
     5521 aggataaatt taactgcaaa aaaagctggc acacctgccg cagtaagttt cacaccatac
     5581 catgaccctg ataatccaaa tggcttaata agatccattt ttgaagacca cgatggcatg
     5641 atgtggctcg caacgagtaa tggattaaag agtttcgaca ggaagacaaa aacctttaag
     5701 cgttacctgc atgaccccaa aaatatccat tccataagca ctaacaattt cgaatggtta
     5761 ggaactctca tccaggagga caaggaggga aatttatgga tcggtaccgg cgaaggatta
     5821 aataaactta gcagcgaccg ccgtgttttt acggtttatc gccacaaccc aaaggatact
     5881 ttcaccttaa attccgatgt tgttatttcc ctgcatattg ataaggcggg cattttattt
     5941 gccggtacct ggggaggaaa actaagcaaa gtaaacctgg atcctaaacc ttttgggctg
     6001 agacgccggg atccgggcaa tataaattct ttgagcagta acgaagtcac atcgatactt
     6061 gaagattcgt caggcattat ttggataggc acatatgatg gagggttgaa tcgatggaac
     6121 aggagcacca atgagtttac ccatttcagg catgattcct caaaccctgc cacgctgacg
     6181 tccgatacta tttttgcgct cctgaacgat cagcatggac atatttgggt atgcaacggt
     6241 gatgtattgt cgaaattaaa aaatcaaaac ggcgaattca tccattatta taccaatctc
     6301 agggatgata agagcgaatt tcaaccaatt attctctcta tcacccagga ccgcgaagga
     6361 tttatttggc tggggaccgg gaatggcctt aaaaaattcg atgaaagaaa aggtgagttt
     6421 attgagcatt actattacga tcctgcagat tcgagtggta tcagtgatta cgggtcatca
     6481 gctgtttttg ctgattcaag ggacaatatc tgggtcggat atagtagtcg cgcaacagat
     6541 agatttgata agaaaagcgg ccggttcatt cattacaaac atgattcccg taattcaacc
     6601 agcattagtt ctaatatcgt aaaaagtttc ttcgaagact caagaagaaa tctttggatt
     6661 ggcactttat cgggcggagc atgttatttc gactacaggg aaggaaaatt tacaaccctt
     6721 accgacaaac atgggcttcc tgcaaataat gtgtattcac ttttaacaga caatgaaaac
     6781 aatctatggc taggtacttc taatggcctt tcacgatatg atcctgccac aaactccttt
     6841 acaaattatt atttcaaaga tggcctgcaa ggcaacgttt tcgtctccgg ggatgggggg
     6901 gctgaaaaaa gtaagggggc atgctttaag ggtagcgacg gtacgttata ttttgggggc
     6961 aacaatggat ttaatttttt cgatcccgaa caactcaaaa cggatagtca aaaagcacct
     7021 gttgttatca cccaattcaa actttttgac agcctcgtaa aaggcgctaa tgaattgaaa
     7081 aaaattattt tgaactatga cgagaattat ttttcatttg aattcgcttc tttaagttac
     7141 gacaatcccg ctaaaaatca ataccaatat aaactggaag gtgcggataa ggattggata
     7201 tctagtggac cacgacgata tgcggaatat actaatatag atccgggcac ctatacgttt
     7261 aaagtaaaag gaacgaacaa cgatggtgtc tggaatgaag aaggtgcttc cattaccatc
     7321 atcataaaac cgccgtggtg gcgcagctgg tgggcctatt ccctgtacgg gttattgatc
     7381 gtagcggcag tatatgcagt ttatcgttat cagcgacaga gactgatcca aagagagcgg
     7441 gataacgcaa gagcaaaaga gctcgcccag gcaaaagaga ttgaaaaagc gtatacagaa
     7501 ctcaaagcga cccaggcaca actcatccaa tcggaaaaaa tggcttcgct tggcgagctg
     7561 accgcaggca tcgcacacga aattcaaaac ccgttaaatt ttgtgaataa tttctgcgaa
     7621 gtaaatggag agttgattga agagttactg gatgaaaggt taaaggtgaa aactgagagg
     7681 gatgaatcac tgcaggacga aataataaat gatcttaaag caaatctcga aaaaatacac
     7741 catcacggca ggcgtgccga cgccattgta aaaggaatgt tacaacattc aaaacaaaca
     7801 aaaggtgtaa aagaaccaac agacatcaat gccctggtag atgaatacct gcgcctctcc
     7861 tatcatggcc tgcgtgcgaa ggataaaaat ttcaatgtaa cacttcaaac agattttgat
     7921 ccagacctct cctccgtcga gggaaaaata aatgtggtgc cgcaggatat tggaagggtg
     7981 ctgttgaatt tatacaacaa tgctttttac gcaacaagcg aaaagctcgc agctcccggc
     8041 tcacagctcg aagctaatag cgcgccctac gtcccaacag tcactatcgt cacaaaaaaa
     8101 ttgcaaaata aaattcaaat cattgtctca gacaacggct ccggcatttc gcaaaatata
     8161 attgataaaa tttttcaacc gttcttcacc ac
//
LOCUS       DASQJI010000776         6591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1959705,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000776 DASQJI010000000
VERSION     DASQJI010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6591
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959705"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VEV83_20510"
     CDS             <1..276
                     /locus_tag="VEV83_20510"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47577.1"
                     /translation="CTPATRELDTVAMKRSKLFTDCYESIFNEAGDFLIPKKHGDLTE
                     NDVHGEIGEVLEGMKTGREDDKQITIFKSLGIAAEDIFSAWHIYKKL"
     gene            379..1353
                     /locus_tag="VEV83_20515"
     CDS             379..1353
                     /locus_tag="VEV83_20515"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HYK47578.1"
                     /translation="MTTEHNHISVSFQDILDARQRLAGKVIRTPLLRLYYDNFPGEIY
                     LKAENLQPIGSFKLRGACNAMSLADQSLLGEGVYTASAGNMAQGVAWNAKMMNIPCTV
                     IVPDHAPQTKLDAISRLGAKYIKIPFDDWWQVLVTRKFEGIKGLFVHPVADPNVIAGN
                     GTIGLEILEDLPDVDAVIVPFGGGGLVSGIGTAIKSKRPEARIFTSEVETAAPLSPSL
                     AAGNPVKVNYTASFVDGMGSTMILSEMWPLLSKIVDASIVLTLKQIADAIKLLIERNR
                     LIAEGAGGSSLAAALTGKAGHGKIVCVISGGNIDAEKLIKILSGTMGL"
     gene            complement(1476..2549)
                     /gene="paaE"
                     /locus_tag="VEV83_20520"
     CDS             complement(1476..2549)
                     /gene="paaE"
                     /locus_tag="VEV83_20520"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaE"
                     /protein_id="HYK47579.1"
                     /translation="MSTHFEKVRIKEVRRETADCVSILFEIPDDLRENFSYLPGQHIT
                     LRTTINNEEVRRSYSLCSSPIHNEWRIAVKKVEGGIFSQLANERIKAGDTMEIMPPIG
                     HFTLPHSDLPKNYVCFAAGSGITPVLSIIKTGLIKQPHSNFTLVYGNRTRQSIIFKEE
                     IDALKNKYIERLQVIHILSREQTDAPLNEGRIDIKKCEQIFRTVASLGADDFFICGPE
                     EMIFSIREWLIEKGIDEKKIHFELFNTSSSVQTKTQKVASQTFGDAISHVTLKLDGRS
                     FDFDLPFESDSILNAALKQGADLPYACKSGVCTTCKAKLLEGKIEMDVNYGLEPEEVA
                     EGFILTCQSHPRTEKVVVDFDIK"
     gene            complement(2564..3154)
                     /locus_tag="VEV83_20525"
     CDS             complement(2564..3154)
                     /locus_tag="VEV83_20525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYK47580.1"
                     /translation="MARIRTAKDVSRKEVILKAAAGLFLEKGYKAASMRDLAERVGVE
                     AASLYNHIRSKTELLHDICFDVANLFWEHLNQVESSNATPIEKLETVLRFHIRQMLEN
                     FQEVYICDREWRYLADPYLSNFQNQRRTYRKRFAAIIEQGIVAGEINKIDASTAVLIV
                     LHAVSGIDSWHRSTHKISGEELEENMITILIDGLKK"
     gene            complement(3296..4447)
                     /locus_tag="VEV83_20530"
     CDS             complement(3296..4447)
                     /locus_tag="VEV83_20530"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK47581.1"
                     /translation="MQVLTYILYGTALLLCVYLLIVNLYLLWFSRLKSFQPNAHHVPQ
                     TGFSIVIPARNEEEKISACLQSVLKNNYPLSLYEIIVVDDFSTDSTAFIVQDLQKEFS
                     NIKLISLKELITESINSYKKRAIEIAIGKSKFEWIITTDADCVVQPDWLKYFDAYIQK
                     FQPVFVAAPVMFNDTGSFLSKFQCLDFVSLQGITAASVSAGFHSMCNGANLAYSKKAF
                     YDVGGFKDADDIASGDDMLLMHKIKLKYPPSIGYLFNRNVIVKTDPMGDWKSFLNQRI
                     RWASKATSYRDLNVLFVLLLVYFVNLCLGVIFILCFFYPRIFLFLVLLVLTKALFELP
                     FMYKVSRFFSLQKLMPWFVIMQPAHIVYTIISGWLGRFGTYQWKGRKVK"
     gene            complement(4460..5260)
                     /locus_tag="VEV83_20535"
     CDS             complement(4460..5260)
                     /locus_tag="VEV83_20535"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK47582.1"
                     /translation="MSQFTLHYKSSKINYYVYGRGPNVLFCLHGYGENGSSFQFLEKE
                     LGSLYTLYAVDFPFHGATEWAETEAFTAGDLLSVVSGIRSANSFSMLAYSMGGRAAMH
                     ILQEFPENIERVVLVAPDGLHVNFWYWLATQTFAGNKLFQATMNDPKWFFAFLDGAGK
                     MKLLDESIIKFVHHFLDNKEERILLYKRWSVMRKFKPRIAALRKACSEKNIPLHFVFG
                     RHDRIILSKRADVFKKEANIHVKLIDAGHQLLKPKYAHEIAALLSDSF"
     gene            5309..5809
                     /locus_tag="VEV83_20540"
     CDS             5309..5809
                     /locus_tag="VEV83_20540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HYK47583.1"
                     /translation="MVKIYNFEFSCINNYMSNSQFKRGELYSVINGMASTAVARRLQK
                     NFRNAGLDITIEQWTVLYHLWKEDSLNQQELCNRTYRDKPSITRLIDNLERQRLVKRA
                     SSKNDKRVNLVCLTDAGRSLQDATLALANQTMDEALTGVKKEEIEVVKSVLQRVYDNL
                     NGEPRS"
     gene            5840..>6591
                     /locus_tag="VEV83_20545"
     CDS             5840..>6591
                     /locus_tag="VEV83_20545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYK47584.1"
                     /translation="MLTSFNNKLQFAPVQETKSTVVLKGGEWLVKETNAFDTFIREDF
                     TEEQLMIMDMCRQYVRSEILPVLDRIDSLEPGLMRSLLTNAGTQGLLSTSFPEEYGGL
                     AKDFVTSTIINEGLGDGFSFSVAIAAHTGIGSLPILYFGTEEQKQKYIPKLGSGEWIG
                     AYGLTEPNSGSDALGARTSARLSDDGKYYLLNGQKCWITNGGFADVYTVFAKVDGDKF
                     TAFIVERGYEGFTQGPEEHKMGIKGSSTVQLY"
BASE COUNT         1924 a         1438 c         1488 g         1741 t
ORIGIN      
        1 tgtacgccgg cgacacggga attggatacg gtggcgatga agcgaagcaa attatttacc
       61 gattgttatg agtcgatttt taatgaagca ggagattttt tgattccaaa aaaacatggc
      121 gaccttacag aaaacgatgt acacggcgaa ataggtgaag tgctagaggg aatgaagaca
      181 ggaagagaag acgataaaca gatcaccatt tttaaatcgc ttggtattgc cgcggaagat
      241 attttttctg catggcatat ttataagaag ctgtgagctg agagctgaga gctgtgagct
      301 gcgagctgtg agcgatgagc ctcgggctat gagcttggct cgctgctcga agctcatagc
      361 tagcggctaa tagcgtatat gacaactgaa cataaccata tctccgtatc attccaggac
      421 attcttgatg cgaggcaacg tcttgccggt aaggtaatac gaacaccact tctccgttta
      481 tattatgaca attttcccgg cgaaatttat cttaaggcgg agaatcttca gccaatcgga
      541 tcttttaagt taagaggtgc gtgtaatgca atgagccttg cagatcaatc actgcttggc
      601 gaaggcgttt atactgcgag cgctggaaac atggcgcagg gagtagcgtg gaatgcaaaa
      661 atgatgaaca ttccctgcac tgttattgtt cccgatcacg caccacagac taagctcgat
      721 gcgatcagcc gcctcggcgc gaaatatatt aagataccgt tcgatgattg gtggcaggtg
      781 ttggtgacga gaaagtttga aggaatcaag ggattgttcg tgcatcccgt ggccgatcca
      841 aatgtgattg cgggaaatgg aacgattggt ttggaaattc ttgaagacct gccggatgtt
      901 gatgctgtga ttgttccgtt tggaggcggt ggcctcgtca gtggtattgg cactgcaata
      961 aaaagcaagc gcccggaggc gagaattttt acctctgaag ttgaaactgc ggcgccatta
     1021 agtccatcgc tggcggccgg aaacccggta aaggtcaact acacggcaag ttttgtggat
     1081 ggaatgggaa gcacaatgat actttccgaa atgtggccgc tgctaagcaa gatcgtggat
     1141 gcttcgattg tgctgacgtt gaaacaaatt gcagatgcca ttaagctgct catcgaacgc
     1201 aacaggctca ttgctgaagg agcaggcggt tcatctcttg cagccgccct caccggcaag
     1261 gctggtcatg gaaaaatagt ctgcgtgatc tcaggcggca atatcgatgc agagaaacta
     1321 attaaaatct tatcgggaac gatggggttg tgaatggtga atggtgaatt gtcaatagtg
     1381 aattgtcaat gagcatcaac ggctatcata caccatacat catacatcgt acatcataca
     1441 tcgtacatca tacatcagag atcatacatc acatcctact taatatcaaa atccacaaca
     1501 actttctccg ttcgcggatg actttgacag gtaagtataa atccttcggc tacttcttca
     1561 ggttccaatc cgtaattcac atccatttca attttgcctt caagcaattt cgctttgcag
     1621 gtagtgcaga caccgctttt acacgcgtaa ggaagatcgg cgccctgttt taatgctgca
     1681 tttagaatgc tgtcgctttc gaaaggaaga tcaaaatcaa agctgcggcc gtctaatttt
     1741 aatgtaacat gagatattgc atcgccgaat gtttgcgatg caactttttg tgttttcgtt
     1801 tgaacggaac tcgaagtgtt gaacagttca aaatgaattt tcttttcatc aattcctttt
     1861 tcaatcagcc attcgcggat cgagaatatc atctcttccg ggccgcatat aaaaaaatca
     1921 tcagcaccca gtgatgctac ggtcctaaag atctgttcgc actttttgat atcgatcctt
     1981 ccttcattta aaggagcatc cgtttgttcc cggctcagga tgtgtattac ctgcagccgt
     2041 tcgatgtatt tgttctttag tgcatcgatc tcttctttga aaattataga ttgcctcgtc
     2101 cgatttccgt aaacaagggt aaagttgctg tgcggctgtt ttatgaggcc cgttttaatg
     2161 atggaaagga ccggcgttat accactgcct gcggcaaaac agacataatt ttttggaagg
     2221 tccgaatgtg gcaacgtgaa gtgaccaatc ggtggcatga tctccatcgt gtcgccagct
     2281 ttaattcgct cgttggcgag ctgcgaaaaa atacctccct ccactttttt tactgctatc
     2341 ctccattcat tatggatggg cgaactgcaa agagaataag aacgtcgcac ttcctcatta
     2401 ttgatcgttg tgcgtaacgt tatatgctgg ccaggcaggt aggaaaaatt ttctcgcagg
     2461 tcatcaggga tctcaaacag gatagaaaca cagtcagccg tttccctccg cacttcctta
     2521 atgcgcacct tttcaaaatg tgttgacatg aaaaattgcc gggctatttt tttaatccgt
     2581 ctatgaggat ggtgatcatg ttttcttcga gctcctcacc gctgatctta tgtgtgcttc
     2641 gatgccagct gtcaataccg ctaaccgcat gcaaaacgat gagcacggcg gtagaagcgt
     2701 cgatcttgtt gatctcgccg gcgacgattc cctgttcgat aatagctgca aaacgtttgc
     2761 ggtaagtacg gcgctggttt tgaaaattcg aaagataagg gtcggctaaa tatcgccatt
     2821 cacggtcgca gatatagacc tcctggaaat tctcaagcat ttgcctgata tgaaatcgca
     2881 gaactgtttc cagtttttca atcggcgttg cattcgatga ttctacctgg tttaaatgct
     2941 cccaaaaaag gttagcgaca tcaaaacaga tgtcgtgcaa cagctctgtt ttcgaacgaa
     3001 tatggttgta caaactggca gcttccacgc ctacacgttc ggccaggtcg cgcatgctcg
     3061 ccgctttata tcccttttca aggaagagtc cggcggccgc tttcaagatc acttctttgc
     3121 gcgatacatc ttttgcagtt cttattcgtg ccatacggca aatgtactta atgctgccta
     3181 cttaacatca ctacgagttt tcagctaaga agcgtatgcg tgagccaaaa aatggaaaac
     3241 cccaaatctc aaataccaaa tcccaaatcc taattcctaa ttcccaaatc ctaaatcatt
     3301 tgaccttcct tcctttccac tgatacgttc caaacctccc gagccatccc gaaataatgg
     3361 tatatactat atgcgccggc tgcatgatga caaaccatgg catcagtttc tgcaaagaga
     3421 agaacctcga gactttgtac ataaaaggaa gttcaaacaa cgccttcgtc aaaacaagca
     3481 acaccaggaa caaaaatatc cgcggataaa aaaagcacag gatgaatatt acaccaaggc
     3541 aaagattcac gaaatacacc aacagtaaaa cgaagagaac atttaagtcg cggtaactgg
     3601 ttgccttact tgcccagcgt atgcgttgat tcaaaaaact tttccagtcg cccatcggat
     3661 cagttttgac gatcacgtta cggttgaaca aatagccgat cgacggagga tatttcagct
     3721 ttattttgtg catgagcaac atgtcgtcgc cactggcaat atcgtccgca tctttgaatc
     3781 cacccacatc ataaaaagct tttttgctat aagcaaggtt agcgccgtta cacatgctgt
     3841 gaaaacctgc ggacaccgac gcggccgtaa taccctggag gcttacaaaa tcgaggcatt
     3901 ggaacttcga caagaatgaa ccggtatcgt tgaacatcac cggtgctgca acaaataccg
     3961 gctgaaactt ttgaatgtag gcatcaaaat acttcaacca atcaggctga acaacgcaat
     4021 ccgcatcggt cgtgatgatc cattcaaatt tgcttttacc gatcgcaatt tcaatcgctc
     4081 tttttttgta ggaattaatg ctttcggtga tcagctcttt gaggctgatc aatttaatat
     4141 ttgaaaattc cttttgaaga tcttgaacga tgaaggcagt cgaatctgtt gagaaatcat
     4201 ctaccacgat tatttcgtaa agcgacaggg gataattatt cttcaatact gattgcaagc
     4261 atgcgctaat tttctcttct tcatttcgtg ctggaatgac gattgaaaaa ccggtttgag
     4321 gcacgtgatg agcgtttggc tgaaaacttt tcaacctgct aaaccacaat aaataaagat
     4381 tcacgatcag caaatacacg catagcaata acgcagttcc ataaagaatg taagtcaaaa
     4441 cctgcataag caaagaaaat cagaatgagt cagacagcaa tgcggcaatc tcgtgcgcat
     4501 attttggctt caatagctga tggcctgcat caattaattt tacgtgaata tttgcctcct
     4561 tcttaaaaac atcggcacgt ttactcagga tgatcctgtc gtgccggccg aatacaaagt
     4621 gcaatggaat attcttctcc gaacacgctt tcctgagtgc ggcgatacga ggcttgaatt
     4681 ttcgcataac agaccaacgt ttatacaata atattctttc ctctttgttg tcaagaaaat
     4741 ggtgcacgaa ctttatgatg ctttcatcca agagtttcat cttgccagcc ccatcaagga
     4801 aggcgaagaa ccattttgga tcgttcatgg ttgcctgaaa taatttgtta cctgcaaaag
     4861 tttgagttgc gagccaatac caaaaattca catgcaaacc atccggcgca accagcacaa
     4921 cgcgttcgat gttctccgga aattcctgga gaatatgcat cgctgcacgc ccacccatgc
     4981 tgtaagcgag catgctgaaa gaattggctg aacggatgcc ggaaacaaca gagagcagat
     5041 ctccggcggt gaaagcttct gtttcagccc attcggtagc accatgaaaa ggaaagtcta
     5101 ccgcatataa agtatacaac gaaccaagct ccttctcgag gaattgaaaa gagctgccgt
     5161 tctcgccata gccatgcaaa caaaataaaa cattcggacc gcggccatac acataataat
     5221 tgatcttcga gcttttataa tgcagggtaa actgagacat tgatgtcaca tcttaacaac
     5281 aaaaaatcta ttgcgaaaag ttggtaatgt ggtaaagata tataattttg aatttagttg
     5341 cataaacaac tatatgtcaa acagccagtt taaaagagga gaattataca gcgtcatcaa
     5401 cggaatggca agcactgcgg tcgcgcgacg actgcagaaa aattttcgca acgcaggcct
     5461 cgatatcacg attgaacaat ggactgtttt atatcacctg tggaaggaag atagcctgaa
     5521 tcagcaggaa ctttgtaatc gtacgtatcg cgacaaacca agcattacac gtttgatcga
     5581 caatttggaa agacaaagac tggtcaaacg cgcttcgtcg aaaaatgaca agagggtaaa
     5641 cctcgtttgc cttacggacg ccggccgttc tttacaggat gcgacactgg cgcttgccaa
     5701 tcaaactatg gacgaagcgt tgaccggcgt aaaaaaggaa gagatcgaag tggtgaaatc
     5761 cgttttacaa agagtgtatg ataatctcaa cggtgaaccg aggtcctaaa aaattttctc
     5821 aaaataaaat tcatgatgta tgctcacgtc atttaacaac aagctgcaat tcgcgcctgt
     5881 ccaggaaaca aaaagtactg tggtattaaa aggtggggaa tggttggtga aagaaacaaa
     5941 tgcgtttgac acgttcattc gcgaggattt tacagaagag cagctaatga taatggacat
     6001 gtgccggcag tatgttagaa gtgaaatact tcctgtgctt gaccggattg acagtcttga
     6061 gcctggatta atgcgctcgc tgcttacgaa tgcaggcacg caaggcttgt tgagcacttc
     6121 ctttccggaa gaatatgggg gacttgccaa agactttgtt acatcgacca ttataaatga
     6181 aggattagga gacgggtttt cgttttcggt cgctattgcc gcgcacaccg ggatcgggtc
     6241 gcttccaatt ttatacttcg gaaccgaaga acaaaaacaa aaatatatac cgaaactcgg
     6301 cagtggtgaa tggatcggcg cttatgggtt aacggaaccg aatagcggca gcgatgcgtt
     6361 gggtgcaaga acaagtgcgc gcctgagcga tgacggaaag tattatctgc ttaacggaca
     6421 aaaatgctgg ataacaaatg gcggattcgc cgacgtgtat acagtgttcg caaaagtgga
     6481 cggcgataaa tttaccgcat tcatcgtcga gcgtggatat gaaggcttca cgcagggacc
     6541 cgaagaacat aagatgggca tcaaaggttc ttcgactgta caactgtatt t
//
LOCUS       DASQJI010000777         1513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3034654,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000777 DASQJI010000000
VERSION     DASQJI010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3034654"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..>1513
                     /locus_tag="VEV83_20550"
     CDS             365..>1513
                     /locus_tag="VEV83_20550"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47585.1"
                     /translation="MLKNYFIIATRHLVRHKFFSVINILCLALGITFSLIIGVYVLNQ
                     YSINTSLKNVSNQYIIKSDWKVKEMGLDITTLGPLAKTLKDEYPGLVANYYRYNPVTN
                     VVSAGDKSFKEDIAIGDTTFISMYGFQLLHGNKQQPFIDNSSAVITETMAIKLFGNAN
                     AIGKVISVLTTANGAKQDYKVTAVLKDIPYNSVTNLVGDTYNVFVPTVGNNYYGSGDP
                     STSWSGAYEVGAIELKPGISPQDLAVPIRQVLAKYTNESIQKNLTVQLAPVKDYYLKE
                     HDSAALRMIMILSLAAAFILLMAVINFVNINIGTSSYRLKEIGLRKVFGGAKKQLIVQ
                     FITEAMLLTGIATVISLLLYEFSRNVFGEVLNTKFESVLHFKTNAVLYL"
BASE COUNT          459 a          291 c          346 g          417 t
ORIGIN      
        1 gacctcaaaa attttagcgg gtcaactgac gacaattcaa ttgaaggtaa aatttatggc
       61 ggcggcccga aggtgaatgt gcgcgccagc agcggaagga taaatgtgag ctttaagtga
      121 tagacacggt cggggcgctt cggcgacctg accgatggaa ctaaaagccg tcagaccgct
      181 ttcagcgttc cgatggtgta catcattgaa ttcacgattc acggatccca tgattatgta
      241 cagggtgctt ggtgagtaat gagtgatcag taatgagttt tgttgtgaat agtgaattgt
      301 gaattgtgaa tggcggccaa cgaagatgaa cagctaacaa aagacggcaa cataaaactt
      361 agtcatgcta aaaaattatt ttatcatcgc aaccaggcac ctggtaagac acaaattttt
      421 ttctgtcatc aatattctat gtcttgcgtt agggatcacc ttttccctga tcatcggtgt
      481 ttatgtgctg aatcaataca gcataaatac atcactaaaa aatgtgagca accagtatat
      541 cattaaaagc gactggaaag tgaaggagat gggattagac attacaaccc ttggcccgct
      601 ggcaaagaca ttgaaggatg agtatcccgg gctggtggcg aattactatc gctacaatcc
      661 tgtaaccaat gttgtttctg ccggcgataa aagttttaaa gaagatattg caataggtga
      721 tacaactttt atttcgatgt atggctttca gcttttacat ggaaacaagc aacaaccttt
      781 tattgacaac agctctgcgg tcatcaccga aacaatggcg ataaaactgt ttggtaacgc
      841 aaatgccatt ggcaaagtta tcagcgtgct taccactgca aacggggcaa aacaggatta
      901 taaagtaact gctgttttga aagacatacc ttataactct gttacaaacc tggtcggaga
      961 tacttacaat gtcttcgtac caactgttgg caacaattat tatgggagcg gcgatccatc
     1021 cacgagctgg agtggtgctt atgaggtagg tgcaatagaa cttaagccgg gcatatcgcc
     1081 gcaagatctt gcggtaccaa tcaggcaggt attggcaaaa tatacgaatg aaagcatcca
     1141 aaagaatctc actgttcagc ttgcgccggt gaaagattac tatctcaaag agcatgacag
     1201 cgctgcactt agaatgatca tgatactttc tttggccgcg gcgtttatcc tgcttatggc
     1261 agtgatcaat tttgtaaata tcaatatcgg cacatcttca taccggctaa aagaaatcgg
     1321 gttgcgcaaa gtatttggtg gagcaaaaaa gcagttgatc gttcagttca ttaccgaagc
     1381 aatgctgctt acaggtatcg ctactgtaat atcattgcta ttgtatgaat tttcgcgaaa
     1441 cgtttttggg gaagtgttga acacaaaatt tgagtcggtt cttcatttca aaacgaatgc
     1501 tgttctttat ttg
//
LOCUS       DASQJI010000778         2120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1343866,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000778 DASQJI010000000
VERSION     DASQJI010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343866"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VEV83_20555"
     CDS             <1..318
                     /locus_tag="VEV83_20555"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: protein motif:HMM:NF013019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase
                     domain-containing protein"
                     /protein_id="HYK47586.1"
                     /translation="FGENIRVLKWIINRINGKASSVECPVGWVPRYEEIDWNGLEFSR
                     EQFSKIMYIDSQLWKDELLSHEELFSKIYDRLPKEFFFMRVLLLSALWRSPQKWGLAP
                     EVE"
     gene            370..1146
                     /locus_tag="VEV83_20560"
     CDS             370..1146
                     /locus_tag="VEV83_20560"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HYK47587.1"
                     /translation="MLPHTEKEPKEFGALLLDVGVSLLNSGASCSRIRITMTRFALAY
                     DYVPHITIGPKSVSLTLDDNDGIPLFNGIRSTPAQGVNFKTISGIGRLSWEAARKKLQ
                     VPELKAALNEVRAAKHYPQIIVLIFVSVAGAAFCYTFGGGGVEMAITFGATFFGLLTK
                     QQLTKYSINPYMCTYCAALVASFFTATFHQAGLGISLEHAFSTCVLFLIPGVPLINAF
                     TDLLDGNILNGMVRGVNALLFALAIAFGLLTTIIIYNLNG"
     gene            1143..1670
                     /locus_tag="VEV83_20565"
     CDS             1143..1670
                     /locus_tag="VEV83_20565"
                     /inference="COORDINATES: protein motif:HMM:NF024230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HYK47588.1"
                     /translation="MIEDWANILFKAFWCGCAAVGFGILFNVPSKTLFMIWSGGAIAG
                     LVKFSALFLIPSAPVIQSSFYASLAVSIFCIPVAHSRHEAPMIFAIPSVIPLVPGVFA
                     YHTMFGIIKLTGKIGSDYALTLSDTVYNGVTTLFIIMAISLGVAIPIHIMRRDPAKKL
                     RETLSSSIVSNDSSD"
     gene            1805..>2120
                     /locus_tag="VEV83_20570"
     CDS             1805..>2120
                     /locus_tag="VEV83_20570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HYK47589.1"
                     /translation="MLEAMFQAKVGDDVFGEDPTINELETKVASMFQMEAAIFCPSGT
                     MTNQIAIKCHTQPGDEIICEKLSHIYQYEGGGIGFNSGCSVKLIDGNYGRINASQVED
                     SIN"
BASE COUNT          534 a          491 c          500 g          595 t
ORIGIN      
        1 tttggcgaaa atatcagggt tttaaaatgg ataatcaacc gcatcaatgg aaaggcttcg
       61 tcggttgaat gccccgttgg ctgggtgccg cgttatgagg agatcgactg gaacgggctt
      121 gagttttcca gggaacaatt cagcaagatc atgtacatcg attcgcagtt gtggaaggac
      181 gagctgcttt ctcatgaaga actgttttct aaaatatacg accggctgcc gaaagaattc
      241 ttctttatgc gggtgctgtt gttatctgcg ctttggcgtt caccgcaaaa atgggggctt
      301 gcacctgaag tagaataacc acgtcggccg cagatctcac cgtgcctccg gcgttcaaga
      361 acaacagtta tgctgcctca cacggaaaaa gaaccaaaag agtttggagc attgttgctc
      421 gacgtcggtg tttcgcttct aaattccggc gcgagttgta gccgcataag aattaccatg
      481 accaggttcg cattggcgta cgactatgta cctcatatca ccatcggacc caagtctgtt
      541 tctctcaccc tggatgacaa tgacggcatt cctcttttca acggaattcg aagcacccct
      601 gcacaaggag taaattttaa aaccatctcc ggtattggcc ggctgagctg ggaggccgcg
      661 cgaaaaaaac tgcaagtgcc cgaactcaaa gcagcattaa atgaggttcg cgcggctaag
      721 cattacccgc aaattatcgt actcattttt gtgagtgttg ccggagctgc tttttgctac
      781 acgtttggag gcggcggcgt tgaaatggcg attacgtttg gtgcaacatt tttcggacta
      841 cttacgaaac agcagttaac aaaatattcc atcaatccct acatgtgcac ctactgtgca
      901 gcattggttg cttctttttt taccgctacg tttcaccagg ctggcctggg tatttctctt
      961 gaacatgctt tttcaacctg cgtattgttt ctgatcccgg gtgtgccact catcaatgcc
     1021 ttcactgatt tgctggatgg aaatattttg aacggaatgg tgcgcggagt gaacgctctg
     1081 ctcttcgcac tggcaatagc ttttggtttg ctgacaacta ttatcatata taacctcaac
     1141 ggatgatcga agattgggcg aacatattgt tcaaagcttt ctggtgtggc tgtgctgctg
     1201 ttggttttgg cattcttttc aatgtgcctt caaaaacgct tttcatgatc tggtcaggag
     1261 gcgcgatcgc cggcctggta aaattctccg cgttgtttct aataccctca gccccggtaa
     1321 tacaaagttc gttttacgcg tcgctggctg ttagcatatt ttgcataccc gtggctcatt
     1381 cgcgtcatga agcgccgatg atcttcgcga ttccgtcggt gataccgctg gttcccggcg
     1441 tgtttgctta ccacactatg ttcggaatta tcaaactaac aggtaagatc ggttccgatt
     1501 acgccctcac actttcagac accgtgtata atggggtgac aacgcttttt attatcatgg
     1561 ctatatcgct gggcgttgct attccgatcc atattatgcg cagagatccg gcaaaaaaac
     1621 ttcgcgagac actttcttcc agcatcgttt ccaatgactc aagcgattga ttctatttgc
     1681 aaccccgtaa gataggatcg cattttacct tgccgacagc aatacaacgc ggaacatcta
     1741 tacgcttatc ttcgcaagca tgatcgattt tcgcagtgat accgtgacga aaccttcggc
     1801 cccgatgtta gaggcaatgt ttcaagcaaa ggtgggcgac gatgtatttg gtgaagatcc
     1861 aacgatcaat gaactggaaa caaaggttgc gagcatgttt caaatggaag cggcgatctt
     1921 ctgcccgagc ggcaccatga cgaatcagat cgctatcaaa tgtcacacac agcctggcga
     1981 tgagatcatt tgtgaaaaat tatcacacat ataccaatat gaaggcggag gaattggttt
     2041 taattccggt tgctcagtaa aattgatcga tggaaattat ggacgcatta atgcatcaca
     2101 agttgaagat tcaatcaata
//
LOCUS       DASQJI010000779         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_732173,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000779 DASQJI010000000
VERSION     DASQJI010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_732173"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VEV83_20575"
     CDS             <1..572
                     /locus_tag="VEV83_20575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYK47590.1"
                     /translation="AQLSIGDPLQATNHVGPLIDTKAVDDYLNAIETAKSQGGKMVVE
                     GGRIEGDGYESGCYVKPCIIEADNELGIVQQETFAPILYVMKYSTVEEAIAKQNGVPQ
                     GLSSSIFTNDLREMELFLSAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSD
                     AWKAYMRRQTNTINYSSELPLAQGIKFHI"
     gene            complement(616..1005)
                     /locus_tag="VEV83_20580"
     CDS             complement(616..1005)
                     /locus_tag="VEV83_20580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS/SEC14 domain-containing protein"
                     /protein_id="HYK47591.1"
                     /translation="MRPPADTEVFEGEIATYWMEDGILISLSKSPKRTVANIKENILL
                     VNRITNNQKVPLLIYLSNSPIPDKETREFSAQQLPNIYSAMAMVSKPGLAKLIMNLLF
                     KFKTPPIPMKNFTDDKDAKNWLKQFLT"
     gene            complement(1153..>2412)
                     /locus_tag="VEV83_20585"
     CDS             complement(1153..>2412)
                     /locus_tag="VEV83_20585"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK47592.1"
                     /translation="SRSNNHFLSSTPNIIVILGDDVGYEIPTYTGGQSYSTTNIDYLA
                     ANGMQFSQCHSTPLCSPSRFMLLTGKYGFRNYTEWGIMDTSQRTFANMLRDAGYATCV
                     VGKWQFNGGDQSIHKFGFDSYSIFDPQTSNTGDHDAIDPKRYKNAHVYQWKNSSIIDS
                     QSTGYGPDISFNYARDFIDSANQPFLLYYASELVHPPFSPTPDDPEYASWNPDLGISD
                     TSFYPSMVHYMDKLIGRLRDHLDSLGILNNTIILFVGDNGTSEMITSTFNGQSVRGGK
                     SEINERGTHVPLIAYWPGTISPAMNGDLIDFTDFLPTVAGIAKISLPNYGPLDGVNFY
                     PSLIGASGTPRSWIFTYYKIHPSATGYRIVQNSNTKEIQKIKKSGDTSIKYYFIPPYP
                     RLDSSIKKSAVPKQIRSTFDSVLSVER"
BASE COUNT          673 a          498 c          564 g          677 t
ORIGIN      
        1 atgcacaatt gagtatcgga gatccgttac aagcaacgaa tcatgtgggg ccgctcatcg
       61 atacaaaagc agtggacgat tatttgaacg cgatcgagac agcaaaatcg cagggcggaa
      121 agatggttgt ggaaggaggc aggattgaag gagacggata tgaaagcggc tgttatgtta
      181 aaccctgcat catcgaagca gataatgagc ttgggatcgt acagcaggaa acgtttgctc
      241 cgatcttgta tgtaatgaaa tattctactg tcgaagaggc catcgcaaaa cagaacggcg
      301 tgccccaggg cttatcatcg tccatattca caaacgattt gcgcgagatg gaactgtttc
      361 tttcagctgc ggggagtgac tgtggcattg ctaacgtaaa tatcggaacc agcggcgcag
      421 agattggcgg cgcatttgga ggtgaaaaag aaaccggcgg tggacgagag agtggcagcg
      481 atgcctggaa ggcctacatg cgcaggcaaa ccaacacaat aaattatagc agcgagttac
      541 cgttggcgca gggaataaag tttcacattt agcactctaa acatctaata tagttttgca
      601 cgcaaacttt tcgttctatg tgagaaattg ctttagccaa ttctttgcgt ctttatcatc
      661 ggtaaaattt ttcattggaa ttggcggcgt tttgaatttg aacaacaaat tcatgatgag
      721 ttttgccagg cctggttttg aaaccatcgc catagccgaa taaatgttgg gaagctgctg
      781 cgctgaaaat tcacgcgttt ctttgtcggg aatcggcgag ttgctcaaat agatcaacaa
      841 cggaactttt tggttgttcg tgatgcggtt taccagcaga atgttttctt taatgttagc
      901 gactgtgcgt ttaggacttt ttgaaagcga aatgagaatt ccgtcctcca tccaataagt
      961 cgcaatttct ccctcaaata cttctgtgtc ggcgggcggt ctcattgtgg taaagataga
     1021 acgcgattct attgctataa gatctttgta tacgatttcc gttcaacatt taaaaacaga
     1081 taactagttt aatcaagcac ctaaccgcaa aaagtgaacg catataaaag ttaccggctt
     1141 gcctcctgaa atttaacgtt caactgaaag tacggaatca aacgtgctcc taatttgttt
     1201 cggtacggcg ctcttcttga ttgaagaatc caacctggga tacggcggaa taaaataata
     1261 ttttatgctc gtatctccac ttttctttat tttctgtatc tctttcgtgt tgctattttg
     1321 cactattcgg tatcctgttg cagaaggatg aattttgtag taagtgaata tccaactcct
     1381 gggagttccc gacgctccaa tcaaactcgg ataaaaattt acgccgtcta atgggccgta
     1441 attgggcaaa gaaatttttg cgatcccggc aacagttggc agaaaatcag taaaatcgat
     1501 aagatcacca ttcatcgccg gtgagatcgt gccaggccag tatgcgatca gcggcacatg
     1561 cgtgcctcgt tcatttatct cgcttttccc tccccggact gactgtccat taaaagttga
     1621 cgtgatcatc tctgatgtac cattgtcacc gacaaacaaa atgatcgtat tattcagaat
     1681 tcctaaagag tccaagtgat ctcgtaagcg cccaatgagt ttatccatat agtggaccat
     1741 ggaaggataa aaactggtgt cgcttatgcc taaatctgga ttccacgatg catattcggg
     1801 gtcatcagga gtcggggaaa agggcggatg gaccagctcg cttgcatagt aaaggaggaa
     1861 cggttgattt gcactatcga taaaatcacg cgcataatta aaagaaatat ccgggccgta
     1921 cccggtggat tgactatcga ttatggaact attcttccat tggtacacat gcgcattttt
     1981 gtagcgtttg ggatctatcg catcatggtc gccggtgttc gatgtttgcg gatcgaaaat
     2041 agagtaactg tcaaatccaa acttgtggat cgactggtcg ccaccgttaa actgccattt
     2101 gcccactacg catgttgcat atcctgcgtc gcgtaacata tttgcgaatg tgcgttgcga
     2161 cgtatccatt ataccccatt cagtataatt tctgaagccg tattttcctg tgagaagcat
     2221 aaaccgcgat ggagaacaaa gtggcgtgga atgacattgg ctgaattgca tgccatttgc
     2281 cgccaggtaa tcaatattgg tagttgaata agattgccct cctgtatacg tcggaatttc
     2341 ataaccaaca tcgtctccca ggataacaat gatgtttggt gtgctgctta aaaaatggtt
     2401 attacttctt ga
//
LOCUS       DASQJI010000780         6525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1809221,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000780 DASQJI010000000
VERSION     DASQJI010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6525
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809221"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VEV83_20590"
     CDS             complement(<1..303)
                     /locus_tag="VEV83_20590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47593.1"
                     /translation="MLGELSIVSKKRCFNNHAAYPLPGSTDEKEIFRSLQQEFTSQFQ
                     NVFPDRLAEKTIIVVPSLTLDREILTKIRGYVYYEERMLCLLMLLRMPQTQIVYVSS"
     gene            504..1334
                     /locus_tag="VEV83_20595"
     CDS             504..1334
                     /locus_tag="VEV83_20595"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYK47594.1"
                     /translation="MRTIIAPTDFSNVSNNAAHYAAKMAEDVNAQLILLHVMELPITV
                     SEFPVTEAVFDEISMEDELKKLKSDLLKTTKGKIKIHVTNILGSVENELKEICNIEKP
                     FAVVMGTHTHGTLQRFLLGSTALYSTRHLEWPVLIVPEDDTYKPIRKIGLASDMKYIY
                     SVPLNQIASILDAFGASLDVFHVNRRARNIEKDSVESILLKQRLLALNPRFSTINDED
                     VEHGVEALAKKNDTDLIVVIPRSHGLFHKAQSAEFVFRSSLPVMAIHESKFVEEEIDA
                     "
     gene            1352..2182
                     /locus_tag="VEV83_20600"
     CDS             1352..2182
                     /locus_tag="VEV83_20600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47595.1"
                     /translation="MQKLLLALDAHDVNTSSVHFASYLANLTKSKLTGVFLENSIGKA
                     ALETQTSCDPFGCVQTTTLQSSATMPAVNIDKNVALFTKICTDNDARFSIHELKGKPV
                     KQMIRESRFADVIVTHGGLHFSDEKNYGWPSEFVAELLVYTQCPVIISPFYFNAVDEI
                     IFAYDGCDSSVFAIKQFTYLFPQFNETRTTLLEVLPEGENEITEKEKLQEWLMMHYDA
                     VHMETLHGKPETELFKNLLTKNNKMLVMGAYGRKVFFNHSTADLLLKTADVAFFITHR
                     "
     gene            complement(2649..3170)
                     /locus_tag="VEV83_20605"
     CDS             complement(2649..3170)
                     /locus_tag="VEV83_20605"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYK47596.1"
                     /translation="MKSKIVSLLAMLVALSFAASAKTSIDEGKAIFTTRCTSCHNVNK
                     QMVGPALANVDQRRNLDWIISFVHSPKSMIANNDKDAVALFNQFNKVTMPDHSDLTPD
                     NIKNIVAYIKTQVSTSTEKAPFATPYKVRPAYKPLTIDNYGFLISYLGLVFLLVGLLV
                     SAVYIKDLQRAKE"
     gene            complement(3160..3810)
                     /locus_tag="VEV83_20610"
     CDS             complement(3160..3810)
                     /locus_tag="VEV83_20610"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYK47597.1"
                     /translation="MKFLKPGRQTILIAAVIIVVPVLLAVSITGLKEKYKSLPVYGEA
                     GINTSKSTEHHVQPFTLEDQDGKTFTLADIKNKIVVVDFFFTSCTSVCPKMTMALKDV
                     ADAFRDDDNVALISFTVDPETDDPARLKWYIHQLNISSPHWTFLTGDKPEIYRLARRS
                     FFLTASDGDGGPNDFIHSDKLVLIDKEKRVRGYYTGTDEKAVKQLMTDIKKLKYEK"
     gene            complement(3824..5551)
                     /locus_tag="VEV83_20615"
     CDS             complement(3824..5551)
                     /locus_tag="VEV83_20615"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HYK47598.1"
                     /translation="MTSTKQQSGLNYFSLTNNGMSLSRSLKLIILIELMLPVVLLTLG
                     IYHGLMQTVYRSGLIHETSVAHLDYYQGLTLHGVINAIVLTSFFAVAFGHATMTFHLR
                     KEPNKKIAWLSLILMVVGTLMAAFAMLTGRASVLYTFYPPLKAAPEFYLGAALLIVGS
                     WVPLFDWARMYVQWRRENQNTKMPMAVLGTLVNFTIWFVCTLAVAYEVLVLLLPWSLG
                     ITKDVNVTLARTLFWFFGHALVYFWLLPAYIMYYTILPKIAGGKLYSDLAGRIAFFLF
                     LLLSIPVGVHHQFSDPNIDRDTKFFQSMLTFGVALPSFITAFTIAASLEYAGKQRGSK
                     GWFGWMKKLPYLDSNNYLFGYLICGLILFIFGGLTGIVNASYQLNNLVHNTAWLPGHF
                     HMTVAGPVFLGIIGMSLYLISKLKGRKVFLPRVNVVVPYLWLIGVLIFSTGLMWGGLI
                     GEPRRTNLGMTYTNPANSLYHPEWIPTTMLALAGGIIMTVSALLYFVVFFGTIFRKKT
                     EESMLEFPVTEAYHDERRVSFFDSFKPWLIIMIVIILIAYVPALIDVFKNSGPGAPTF
                     LPNNPTPGS"
     gene            complement(5589..6044)
                     /locus_tag="VEV83_20620"
     CDS             complement(5589..6044)
                     /locus_tag="VEV83_20620"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HYK47599.1"
                     /translation="MIDKSERTVFTITAIVIMLFVFSLVYAKTTRKIDLPECVPYDKA
                     YETPAVKQIDDSLYQVYVVARMWQFEPAQIYIPVGSTVDFFLTSKDVVHGFDIYEKNV
                     NMMAVYGGINKTTVKFDKPGVYKITCHEYCGIGHQNMQSEVIVNYTDAK"
     gene            6299..>6525
                     /locus_tag="VEV83_20625"
     CDS             6299..>6525
                     /locus_tag="VEV83_20625"
                     /inference="COORDINATES: protein motif:HMM:NF012995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HYK47600.1"
                     /translation="MDVDRYLRRINYEGTREPNLTLLAALQKQHLLHVPFENLDIHYK
                     TPIELNVPRIFEKVVHNKRGGFCYELNGLFY"
BASE COUNT         1911 a         1410 c         1420 g         1784 t
ORIGIN      
        1 actgctcaca tacacgatct gggtttgtgg cattcgcaat aacatcagca ggcaaagcat
       61 gcgctcttca taatacacgt aaccgcgaat cttcgtaaga atttcccggt caagcgtcaa
      121 cgatggaaca acaatgatcg ttttttccgc aagcctgtcg ggaaagacat tctggaattg
      181 cgacgtgaat tcctgttgta gcgatcgaaa tatttctttt tcatcggtgc ttcctggaag
      241 aggataagct gcgtgattat taaaacaccg tttcttactg acaatggata attctccaag
      301 catgatacgc aaattaaaat cgatgccggc cgaaaattat gatacccgtc atcacaaaac
      361 atgatatttc agcaggcgga aaaagactaa cggccggtcc tcccaactct tgacaacaat
      421 catttcatgt tttgaccatc atcacccgta accgcttggc atcttcttac tttcaccatc
      481 agtaaataat aaaataaatg gaagtgagaa cgataattgc ccccactgat ttttccaacg
      541 tttcgaataa tgcggcacat tacgcagcaa agatggctga agacgtaaac gctcagttga
      601 tcctgttgca cgtaatggag ctgccaataa ctgttagcga gtttccggta actgaagctg
      661 ttttcgacga aattagtatg gaggacgaac tgaaaaagct taagagtgat ctactgaaaa
      721 caacaaaagg caaaataaaa attcacgtaa caaatattct tggttcagtt gaaaatgaac
      781 tgaaagagat ctgcaatatc gagaaaccat tcgcagtcgt aatgggcaca catactcatg
      841 gtacgctcca acgtttctta ctgggaagca cggctctgta tagcacaaga cacctcgaat
      901 ggccggtgct gatcgtaccg gaagacgata cgtataagcc catcaggaag atcggtttgg
      961 cgtcagatat gaagtacatt tatagcgttc ctcttaacca gatcgcaagc attttggatg
     1021 cttttggtgc ttccctcgat gtttttcacg tcaacaggag agccaggaac attgagaaag
     1081 actcggtaga atcgatactg cttaaacaac ggctgctagc tctaaacccg cggttctcta
     1141 cgattaacga tgaagacgtg gagcatggtg tagaggcact cgcaaaaaag aacgataccg
     1201 atttaatagt ggtgatcccg agaagccacg ggctttttca caaggcacag tctgctgaat
     1261 tcgtttttcg ttcttcattg cctgtaatgg ccatccatga aagcaagttt gtcgaagagg
     1321 aaatcgatgc ttaatactaa aaacacgttg tatgcaaaaa cttttactcg cgctggatgc
     1381 acacgatgtg aacacttcga gcgttcattt tgcatcttac ctggctaatt tgacgaaatc
     1441 aaaattgaca ggtgtgttcc ttgaaaattc tatcggcaag gccgctcttg aaacgcaaac
     1501 atcctgcgat ccttttggct gtgtacagac tactacgctt cagtcaagtg caacaatgcc
     1561 cgcagtcaat attgataaaa atgtagcgtt gttcacgaaa atatgcacgg ataacgacgc
     1621 caggttctcg attcacgagc tcaagggcaa accggttaaa caaatgatcc gcgaaagcag
     1681 gtttgccgat gtgatcgtta cccacggcgg tttgcatttc agtgatgaaa aaaattacgg
     1741 atggccttcc gaatttgtgg cggaactgct agtgtacacc cagtgcccgg tgatcatatc
     1801 tcctttttat tttaatgcag tcgacgagat catattcgct tatgatggct gcgactcgtc
     1861 cgtgtttgcg ataaaacaat ttacgtacct gttcccgcag tttaatgaaa ccaggaccac
     1921 gttgctggaa gtgttgcctg aaggggaaaa tgaaataact gaaaaagaaa aattgcagga
     1981 gtggctgatg atgcattatg atgcggttca tatggaaacg ttgcatggca agccggaaac
     2041 cgaattattt aagaacctgc tgacaaagaa caataagatg ctggtgatgg gtgcttatgg
     2101 aagaaaagtt ttctttaatc acagcaccgc cgacctttta ttaaagacag cggatgtggc
     2161 gttttttatt acacatcgtt gaacgctgtt attcttgttt catacagtcg ccggcgggct
     2221 ttagcctgcc ggctttattt tgtttatgaa ccgttgatat acgtgaataa aagaggcatg
     2281 tgaacttgat caaaatcata cagccggcaa tctgcgatca tccggcggga tgtttattcg
     2341 tcgcagattt gcgatgggat gtatcggttg tcgcatacat ctcgtagcaa acgatggcag
     2401 tttgttagag tcctgttatt cataacggga ctcgtttatt aaagcctcag ccattcggat
     2461 tttgcagcat cgacaaagaa gtaatgaaag gaatatctaa caggtggaca ttaaacgcca
     2521 ttgcccagcg gcagcaatgg atatgcaaaa aaaaccgggt gctcgctttg tgagtattgg
     2581 ttttgcgaga cacccggtaa caaatcaaac caagtgtatg aagcctaaaa aattttgttc
     2641 ttgttgaact attcttttgc tctttgcagg tcttttatat acacagcaga cactaacaaa
     2701 ccgacaagaa gaaaaacgag accgagatag ctaataagaa atccatagtt atcaattgtc
     2761 aatggcttgt atgccggcct cactttatac ggtgttgcga aaggcgcctt ttctgttgat
     2821 gtggaaacct gtgttttaat ataagcaacg atatttttga tattgtcggg tgtaagatct
     2881 gaatggtctg gcatcgttac cttgttaaat tggttaaaga gcgcgacggc atccttgtca
     2941 ttatttgcga tcatggattt tggtgaatgc acaaaactta tgatccagtc taaattccgg
     3001 cgctgatcta cgttcgctaa tgctggtccg accatttgtt tgttcacgtt atggcacgag
     3061 gtgcaacgcg ttgtaaaaat cgctttgcct tcatctatcg aagtctttgc acttgccgcg
     3121 aaagaaagtg caacgagcat ggcaagcagc gatacaattt tacttttcat attttaattt
     3181 ttttatgtca gtcattagtt gtttcacggc cttttcatcg gtgcccgtgt aataaccgcg
     3241 aacacgcttt tccttatcga tgagcacgag cttgtcgctg tggatgaaat catttggccc
     3301 gccgtcaccg tcagacgctg taagaaaaaa acttcgccgt gcaagcctgt agatctccgg
     3361 tttgtctccg gtcaaaaaag tccagtgcgg gctgctaatg ttgagctgat gtatgtacca
     3421 tttcaaacga gctggatcat ccgtttccgg gtctacagta aacgagatga gggcaacgtt
     3481 atcatcgtct ctaaatgcat ctgccacatc tttaagagcc atcgtcattt tcggacatac
     3541 tgaagtgcag ctcgtaaaga aaaaatcgac cacaactatc ttgttcttaa tatcagcaag
     3601 cgtaaacgtc tttccatcct ggtcttccag ggtgaatggc tgaacgtgat gctccgtaga
     3661 tttagaagta tttatgcctg cttcgccata cacaggcaag cttttatact tttctttcaa
     3721 accagttatg ctcacggcca gcaacacggg cacaacaatg atcactgctg cgatcaatat
     3781 tgtttgcctg cctggtttca aaaatttcat cgcttaaaaa cttttatgag cccggtgttg
     3841 gattgttcgg caagaacgtc ggcgcacccg gtccgctatt tttgaacaca tcgatcagtg
     3901 ctggcacgta cgcgatcaga atgataacga tcattatgat gagccatggc ttaaagctgt
     3961 cgaaaaatga aacgcgtctt tcatcatgat atgcttcagt caccgggaac tccagcattg
     4021 attcttcggt cttctttctg aagatggttc caaaaaaaac aacgaaatat aataatgcag
     4081 acaccgtcat aataatgcca ccggccaagg cgagcatagt tgtgggtatc cattcaggat
     4141 gatataggga attagccgga tttgtgtacg tcatacctaa gttcgtacgc ctcggttcac
     4201 caatcaatcc gccccacatc aatccggtag aaaatattaa aacgccgatc agccataaat
     4261 aaggaaccac cacatttaca cgtggcagaa atacctttct tccttttagt tttgaaatca
     4321 aataaaggct catgccgatg atgccaagga ataccggccc tgcaacagtc atatgaaagt
     4381 ggcccggtaa ccatgcggtg ttgtgcacca ggttgttcag ttggtatgaa gcatttacaa
     4441 tcccggtcaa cccgccgaaa ataaaaagta tcaatccgca tatgagatac ccaaacaggt
     4501 agttgtttga atcgagataa ggcagctttt tcatccagcc aaaccatccc ttacttcctc
     4561 tttgtttgcc cgcgtactcg agagaagctg caatcgtaaa agctgtgata aagcttggca
     4621 gagcaacgcc gaacgttaac atggattgaa aaaatttcgt gtccctgtca atattcgggt
     4681 cgctgaattg gtgatgtacg ccaacgggga tcgataacaa taggaaaaga aagaacgcga
     4741 tgcggccggc caggtctgaa tacaatttcc ctccggcaat ttttggcagg atcgtatagt
     4801 acatgatata agctggcaat aaccagaagt acactaatgc atgtccaaaa aaccagaaca
     4861 gtgttcttgc gagtgttacg ttaacatctt ttgtaattcc taaagaccat ggcaacaaca
     4921 atacgagtac ttcatatgca acagcaagtg tacacacaaa ccaaattgtg aaattaacaa
     4981 gtgtgccgag cactgccatt ggcatcttgg tattttgatt ttcccttctc cattgtacgt
     5041 acatgcgcgc ccagtcgaac agcgggaccc atgaaccaac gatgagaagt gctgcaccta
     5101 aataaaactc cggagccgct ttaagaggcg gataaaaagt gtagaggaca gatgcgcgcc
     5161 cggtgagcat tgcgaatgca gccatcaatg ttccgaccac cattaagatc aacgacagcc
     5221 atgcaatctt tttgttcggc tcttttctta aatgaaaagt catggttgca tgcccgaatg
     5281 ccacagcgaa aaaagaagtg agcacgattg catttataac gccatgcagc gttagcccct
     5341 ggtaataatc gaggtgggcg accgaagttt catggataag accgctgcgg taaacagttt
     5401 gcatcaggcc gtggtaaata cctagtgtaa gcaacacaac cggcaacatg agttcgatca
     5461 gtatgatcaa cttcagtgag cggcttaagc tcatgccgtt gtttgtaaga gaaaagtaat
     5521 taagacctga ttgttgtttg gtagaagtca tacctggttt gtttgaaata ttttattgta
     5581 ggtttctttt acttcgcatc cgtgtaattc acgatcactt ccgattgcat gttctggtgg
     5641 ccgataccac agtactcgtg acaggtgatc ttgtaaacgc ccggtttatc aaactttact
     5701 gtggttttgt tgatgcctcc ataaactgcc atcatgttta cgttcttttc ataaatgtcg
     5761 aagccatgta ctacatcttt tgatgtaaga aaaaaatcaa ccgtgctgcc aacaggaata
     5821 tatatttgag ccggttcaaa ctgccacatc ctcgccacaa catacacctg gtaaaggctg
     5881 tcatcgatct gcttaacggc gggtgtctca tacgccttat cgtaaggcac acattcggga
     5941 agatcgatct tcctggtcgt ttttgcgtat accagtgaga acacaaaaag cattattaca
     6001 atcgctgtaa tggtaaagac agtcctttct gatttatcga tcataatatt aattttaact
     6061 gcgttgaagc attaaaaaat aaaggccgta ccaaattgta agacagagaa taataagcac
     6121 cacaaagaat gctatggcgc cagtaggtat aaatttacct tgttgaacgt cgctcataaa
     6181 tcacctggtt ttaatatttg aaagcaaaac tattgggaga cctatttctg aaacatgacg
     6241 cgaataatgc gaaaacatga tcttaatcat gttattttga gaagtaaacc ggcgcctcat
     6301 ggatgttgac agatacctgc gcagaataaa ttatgaaggt acccgcgagc caaacttgac
     6361 actgcttgcc gccttgcaga aacaacactt actgcacgtt ccttttgaga atctcgacat
     6421 ccattataaa acacccattg aattaaatgt gccgcggata tttgagaagg tggtccacaa
     6481 taaacggggc ggattctgtt acgaattgaa cgggctgttc tatga
//
LOCUS       DASQJI010000781         8415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1653668,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000781 DASQJI010000000
VERSION     DASQJI010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8415
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653668"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VEV83_20630"
     CDS             <1..562
                     /locus_tag="VEV83_20630"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK47601.1"
                     /translation="ISIEEYLEMENASPEKHEYYRGEVLAVSGAKVPHVIISGNIFAA
                     LKQKLRGKPCQPFGGDLRVHVESNTLFTYPDISVVCGEITTLNNDNYNVINPSVLIEV
                     LSKSTRNYDRGEKFKLYRDIPTLKEYVLVDSEVVAVEIFRLNANHHWELEEYKSTVEG
                     FAIQVINTPLLFSEVYDGTELADKLF"
     gene            888..1331
                     /gene="rplK"
                     /locus_tag="VEV83_20635"
     CDS             888..1331
                     /gene="rplK"
                     /locus_tag="VEV83_20635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HYK47602.1"
                     /translation="MAKEISGFVKLQVKGGQANPAPPVGPALGSKGVNIMEFCKQFNA
                     RTQDRMGKVLPVLITVYSDKSFDFIIKTPPASVQLLEAAKIQKGSKESNRNKVGKVSW
                     AQVEAIAKDKMPDLNCFTVESAMKMVAGTARSLGITVEGAAPWNN"
     gene            1353..2045
                     /gene="rplA"
                     /locus_tag="VEV83_20640"
     CDS             1353..2045
                     /gene="rplA"
                     /locus_tag="VEV83_20640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HYK47603.1"
                     /translation="MAKLPKKRKLAEAKIDKSKLYSLKEASTIVKDVNTAKFDASVDL
                     HIRLGVDPKKADQQVRGTVNLPHGTGKTKKVLVLCPPDKEADAKSAGADFVGLDEFVQ
                     KIEGGWTDVDVVIATPSVMPKIGKLGKILGPRNLMPNPKTGTVTNDVAAAVNEVKGGK
                     IAFKVDKAGIVHASIGRVSFTPEKIAANGQELINTIMKLKPSTAKGIYLKGVSMASSM
                     SPGITVDTKSVH"
     gene            2099..2626
                     /gene="rplJ"
                     /locus_tag="VEV83_20645"
     CDS             2099..2626
                     /gene="rplJ"
                     /locus_tag="VEV83_20645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HYK47604.1"
                     /translation="MHRDQKNEVIEVLKEKFSQYNNFYVTNTDALTVDQVNKLRRICF
                     NKKVEMKVAKNTLIRKALEAIDAEKYAGVYDSLHGVTALMFSENAKEPALIITDFRKA
                     SNSEKPVFKAAYIDSDVFVGNDQLETLKSLKSKHDLIGEIIGLLQSPAKNVISGLNAG
                     AKLASLVKALEERAN"
     gene            2831..3214
                     /gene="rplL"
                     /locus_tag="VEV83_20650"
     CDS             2831..3214
                     /gene="rplL"
                     /locus_tag="VEV83_20650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007654177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HYK47605.1"
                     /translation="MADLKAFAEQLVNLTVKEVNELAKILKEEYGIEPAAAAVAVAGP
                     AAGGGAAAPVAEEKTSFDVILKSGGANKLQVVKIVKDLTGLGLKEAKDLVDGAPKPVK
                     EGVAKAEAEEVATKLKDAGADVEVK"
     gene            complement(3314..4417)
                     /locus_tag="VEV83_20655"
     CDS             complement(3314..4417)
                     /locus_tag="VEV83_20655"
                     /inference="COORDINATES: protein motif:HMM:TIGR03118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03118 family protein"
                     /protein_id="HYK47606.1"
                     /translation="MKNILYRNLRICLLPVMLSSLIVSCKKMSDVAANQSNVSDMQIG
                     SDLKLTGFKTAVLNANKASYGPVHIDKNLHNAWGMSASDEGEIWVSAADAGLSFVYNV
                     VGDNLMPPVNIPSHKMNVPGNPTGNIYNESSDFVIPGTKDPAEFLFASEDGTISAWND
                     ATGSSAVVVIDKHKNASYKGIATAESGGNEYLYATNFETAKIDVFDGKFNRVHMDFTD
                     NDIPDGYAPFNIREVKEKLFVTYALRTKDGEEDSTGAGLGFVDVYSPDGSLVKRFASH
                     GTLNAPWGITTARPGLLGDDAILIGNFGDGHINVFDMDGNYKGQMMNGSEPIAIEGLW
                     AIDNNFQHTSARQLYFTAGPNDEEDGLFGFVFR"
     gene            complement(4616..5734)
                     /locus_tag="VEV83_20660"
     CDS             complement(4616..5734)
                     /locus_tag="VEV83_20660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03118 family protein"
                     /protein_id="HYK47607.1"
                     /translation="MKNMLCQVRQYMGFLVFLCTLLILGAGCNKMADVTANKPNNATT
                     QTDDIVSGVGYHYVLLTANKASYGAPHIDPDLHNAWGLSSGPSGILWVSAADAGLSYV
                     YNQAGEDVIPPVTIPSHEDGVPGNPTGNIYNPTTDFIIPGTGLPGKFIFASEDGTISA
                     WNGGPSAVIVADEHKHASYKGLAIANDDGQNFLYVTNFEKARIDIFDKNFNQVHGKPF
                     RDDNIPDGYAPFNIRNIDNMLYVTYALRTADGEEDSTGVGLGFVDVYKPDGHFSKRFA
                     TQGKLNAPWGITPTQHVSWRPDYILIGNFGDGRINAFYPDGTFVGQMQNMGQPLVVEG
                     LWAIETQITGVGPKQMYFTAGPNDEEDGVFGYIEKNPQ"
     gene            6005..>8415
                     /locus_tag="VEV83_20665"
     CDS             6005..>8415
                     /locus_tag="VEV83_20665"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HYK47608.1"
                     /translation="MKKFFISCLLLGNIVCLSAQNVLSPRQFLGYEIGEHYTPCSRVV
                     DYFNHVSQAIPSMVKVQKYGETNERRDLIVAFISSADNIKNLENIRKNNLRLAGLLND
                     GVNGDINAPVIVWLSYNVHGNEPSSSEAAMKVLYALADPNNAETKQWLQNTVVVIDPC
                     QNPDGRDRYINWFNTAVGNTFNADPQSREHDEPWPRGRTNHYNFDLNRDWAWQTQKES
                     QAKLKLYNDWMPQIHVDLHEQGYNEPYYFAPAAQPYHEVITQWQRDFQVQIGKNNAKY
                     FDENGWLYFTREVFDLFYPSYGDTYPTYNGAIGMTYEQGGIEGGLGIKTLSGDTVTLA
                     DRALHHYTASLSTIEISAANAPKLVSQFKKYFDDNISGGNFEYKTYVLTSPDKNKIEE
                     VKKLLDGCKISYGSLSNANFSGYNYFSNKTEIYTNEGYQIAITAMQPKGRLVKVLFEQ
                     QSRLVDSSTYDITAWSIPYSYGVNAWAVKEKLPVAPYSSATGISNIESSYGVLIPYTS
                     FNASKLLAYILKNKVRVRYATSSFKYNERTFERGTLIILKGNNVPDWTFVVNTGCNLY
                     NIQPYAVQTGFMETGADFGSDYVHIVKAPRVAVLTGDDVSASAAGEVWCLFDNELNYP
                     ISQLNTEHLQDINLEKYDVLIMPDGDYDAFDDKLVVSKLDNFVRNGGKLIATEGGAEK
                     LAEFTWSGFNLIKDTAQSSDSIIQRKYGNAARESLTRFIPGAIYKLQLDNTHPLAYGY
                     PGYYYTLKQDSRVYQNVKNGWNVGILPANAYVAGFVGSKLKTQLSTGVLIGERQYGEG
                     NIVVL"
BASE COUNT         2475 a         1841 c         1909 g         2190 t
ORIGIN      
        1 aatttctatt gaagaatatt tggagatgga aaatgcatct cccgaaaagc atgagtatta
       61 cagaggtgaa gtattagcag tgagcggtgc aaaggttccg catgtaatta tcagcggtaa
      121 catttttgct gcgctcaagc aaaaattaag gggtaaacca tgtcagccat ttggaggcga
      181 cctgcgggta catgttgaat cgaacacact tttcacgtac cccgacattt ccgttgtttg
      241 tggagagatc acaactttaa ataatgataa ctacaacgtg ataaacccgt ccgtgctgat
      301 agaagtactg tcaaaaagta caaggaacta tgatcgcggg gaaaagttta aactttatcg
      361 tgatattcca acactcaaag aatatgtgct cgtagattcg gaagttgtag cggttgaaat
      421 ttttcgtttg aacgccaacc atcattggga attggaagaa tataaaagca cggttgaagg
      481 ttttgcgata caagtcatta acacgccgtt attattttcc gaagtgtatg acggaacgga
      541 gctcgccgat aagttattct aatgtcgccc ggtacagagc tgccgatgca tatccctcac
      601 ttcggccgca gccccgattg aagtgaaaag cccacagctg aagcctctgc gccatgccag
      661 tgtggcgagg acttgaacga aaagcgggaa ccgaagttgc atagcatagt gaagcctgat
      721 gctgcccaca tgataaaaga attcttaatc ctttcctttt tccattgcct tcccctatct
      781 ttgccgcccc aaaagttctt tttcatcctc catagcttct gcaaaggagg gttaatcttg
      841 ggagttctga taaatatcgg aacgcttgaa ccaataaaat ttatacaatg gctaaagaaa
      901 tctccggctt tgttaagctg caggttaaag gcgggcaggc aaatcctgcg cctccggttg
      961 gacctgcact tggctccaag ggcgtgaaca tcatggaatt ctgcaaacag ttcaatgccc
     1021 gcacgcaaga caggatgggt aaagtactcc ctgttctcat cacagtttat tctgataagt
     1081 cttttgactt tatcatcaag acacctcccg cttctgttca attactggaa gctgccaaaa
     1141 tccagaaagg ttccaaagaa agcaaccgca acaaagtagg caaagtgagc tgggcacagg
     1201 tcgaagcaat tgctaaagac aaaatgcctg atctcaactg tttcactgtt gagagcgcca
     1261 tgaaaatggt cgcaggtact gcccgcagtc tgggaattac agtcgaagga gcggctccct
     1321 ggaacaatta atcacacgta aactttttaa aaatggcaaa gcttccaaag aagagaaaat
     1381 tagcagaagc taagatcgat aaaagcaaat tgtattcttt aaaagaggca tcgacgatcg
     1441 ttaaggatgt aaacacagcc aaattcgatg catctgtaga cctgcatatt cgccttggcg
     1501 ttgatccgaa aaaagcggat cagcaagtcc gtggcaccgt aaacctcccg catggcacgg
     1561 gcaaaacgaa aaaggtattg gttctttgtc cgccggacaa ggaagcggat gcaaaaagtg
     1621 cgggcgctga ttttgtaggg ctcgatgaat tcgttcagaa aattgaaggt ggctggaccg
     1681 acgtagatgt ggtgatcgca acaccttcgg tgatgccgaa gatcggtaaa cttggtaaaa
     1741 tacttggccc acgcaacctg atgccgaatc caaagaccgg cacggtgacg aatgatgttg
     1801 ctgcagcagt aaacgaggtg aaaggtggca agatcgcatt caaagttgac aaggcgggca
     1861 tcgttcatgc gtccatcggc cgcgtttctt ttacaccgga aaaaattgca gcaaacggcc
     1921 aggaactgat aaacacgatc atgaaattaa aaccatcaac agcaaaagga atttatctga
     1981 aaggggtgag catggctagt tctatgagcc ccggcatcac ggttgataca aaatcagttc
     2041 actaatccgc caccgctctt gtaagaaggg tgtcatttat aacattcaat catttgaaat
     2101 gcatagggat cagaaaaacg aagtaattga agttctcaaa gagaagttca gtcaatataa
     2161 taacttctac gtaacgaata ccgatgcttt gaccgttgac caggtcaata agcttcgccg
     2221 catttgtttc aataagaaag ttgaaatgaa ggttgccaag aacacgctca ttcgtaaagc
     2281 acttgaagcg atcgacgctg aaaaatatgc cggggtttac gacagtctcc acggtgtaac
     2341 ggcgctcatg ttcagcgaaa atgcaaaaga acccgcgctg atcattacag attttcgcaa
     2401 agcgtccaac agcgaaaagc ccgtttttaa agcagcgtat atcgacagtg atgtttttgt
     2461 tggcaacgac cagcttgaaa cattgaaatc actgaaaagc aaacacgacc ttattggtga
     2521 gatcatcggc ttactgcaat cgcccgcgaa gaatgtgatc agcggcctga atgccggagc
     2581 gaaactggca agcctggtga aagcgttaga agaaagagcg aattaattta cgatgtatga
     2641 ttttggattt acgatttgaa acttttttaa aaatcgtaaa tcgtaaatcg taaataatat
     2701 aaaatctctt gcctggagac tgacaaaaca ggcgtccacg tcttaggaca gttaagacaa
     2761 atttttttaa aactaccgcc ggagttccga tcggaatcgg gagcaatgaa ggcggcaaaa
     2821 atttgaaaac atggcagact taaaagcatt tgctgaacaa ctggtaaacc tcaccgtgaa
     2881 agaggtgaat gaactcgcaa aaattcttaa agaagagtac ggcatcgaac ctgcagccgc
     2941 tgcggttgca gtagctggtc cggctgccgg cggtggtgct gctgcgcctg ttgctgaaga
     3001 gaaaacttct ttcgacgtta ttcttaagag tggtggtgca aacaaactgc aggtagtgaa
     3061 gatcgttaaa gatctaactg gcctcggttt gaaagaagcc aaagacctgg ttgatggcgc
     3121 tccgaaacct gtaaaagaag gcgttgccaa agcagaagca gaagaagtag caacaaagct
     3181 gaaagatgca ggcgcggatg ttgaagtgaa ataatttggc gattaaggtt accagttcaa
     3241 ctactataaa aaacctcgtt ttacaacgag gtttttttat gtgcataaca ttagctaatc
     3301 ttaaagtatg cggctatcta aaaacaaatc cgaataaccc gtcttcttca tcgttaggcc
     3361 cggcggtgaa atacagttgc cgcgctgatg tgtgttgaaa attattgtcg atagcccata
     3421 atccttctat cgctattggt tcggaaccat tcatcatttg tcctttgtaa ttcccgtcca
     3481 tatcaaaaac atttatgtgg ccgtcgccaa aattgccaat aagaattgcg tcgtcgccaa
     3541 gaagtcccgg cctggccgtt gtaattcccc agggtgcatt taaagtcccg tgagaagcaa
     3601 aacgctttac cagggatccg tcaggcgaat acacgtcaac aaagccaagc cccgcgccgg
     3661 tggaatcttc ctcgccatct ttagttctca gtgcataagt cacaaacagc ttttccttta
     3721 cttctcttat attaaaaggt gcatacccgt caggaatgtc attgtctgta aaatccatgt
     3781 gcacgcgatt aaattttccg tcgaagacgt caattttggc ggtttcaaaa ttcgttgcgt
     3841 acaaatattc attaccgccg ctttccgcgg tagcaatgcc tttatatgat gcattcttat
     3901 gcttgtcaat cacgacaacg gcggagcttc ccgtagcatc attccacgcg gatattgttc
     3961 cgtcttcgct cgcaaaaaga aattctgccg gatcttttgt tcccggaatc acaaaatcgc
     4021 ttgattcgtt gtagatattt ccggtgggat tacccggcac attcatctta tgggaaggaa
     4081 tgttaaccgg tggcattaaa ttgtcaccaa caacattgta aacaaagcta agtccggcgt
     4141 cggcagcgga aacccaaatt tcaccttcat cgctcgcgga cattccccat gcgttatgaa
     4201 gatttttgtc gatatgcaca ggcccataag atgctttgtt cgcatttaga actgctgtct
     4261 tgaagccagt cagcttgaga tcactgccta tctgcatatc agaaacatta ctttgattcg
     4321 ctgcaacgtc agacattttc ttacaactaa cgatcaacga cgagagcatg acgggtagca
     4381 ggcagatacg gaggttgcgg tacaggatgt ttttcatacc atttaatttt ttagtgaata
     4441 attagtgggc accggtttgt acatgccggg tagcatgtat ctcggccagg tcgttaaatc
     4501 aaactgaatt ttcttctaaa tggttgctta ggcgtttcat tacgggcggc gaagttccca
     4561 tcttcaatta atgccgagat acatccggcc ggttcagcag ggatttatct ttaactcact
     4621 gcggattttt ttcaatatag ccgaacacac cgtcttcttc atcattaggc ccggcggtaa
     4681 aatacatctg ttttggaccc acaccagtta tctgtgtttc tattgcccag agtccttcga
     4741 ctaccagcgg ctgccccatg ttttgcattt gaccaacgaa cgttccgtca ggatagaatg
     4801 cattgatcct tccatctccg aaattgccga taaggatata atcggggcgc catgaaacat
     4861 gctgagttgg cgtgatcccc cacggggcat ttagctttcc ctgcgtagca aagcgttttg
     4921 aaaaatgacc atccggtttg taaacatcga caaaccccag gccaacgccc gtagaatctt
     4981 cctcgccatc cgcagttctg agtgcatagg ttacatacaa catgttgtcg atattccgta
     5041 tgttgaaggg agcatagcca tccggaatgt tatcatcgcg aaatggtttg ccatgcacct
     5101 ggttaaagtt cttgtcaaaa atgtcgatac gtgctttttc aaaattcgtg acatacaaaa
     5161 agttctggcc atcatcattt gcaattgcca atcctttata cgatgcatgt ttgtgctcat
     5221 cagctacgat aacagcgctg ggtccgccat tccatgcaga aatggtcccg tcttcgcttg
     5281 caaaaatgaa tttgcccggc aagcccgttc ccggaattat aaaatccgtt gtgggattat
     5341 aaatattgcc cgtgggattt ccagggacgc catcttcatg agaaggaatg gtgactggtg
     5401 gtattacatc ttctccagcc tggttgtata cgtaactcaa acccgcgtct gcagcggaga
     5461 cccacaggat gccagacggg cccgacgaca gaccccaggc gttgtgaaga tccggatcga
     5521 tatgcggtgc cccataagac gctttattag cagtaaggag aacatagtga tagcccacgc
     5581 ccgaaacaat gtcatctgtt tgtgttgtgg cattattcgg tttgtttgca gtaacatcag
     5641 ccattttgtt gcagcctgcg cctaagatca acaaagtgca taagaaaacc aggaagccca
     5701 tatactgacg aacctggcaa agcatgtttt tcataccatg tatgtttttg tggtgaataa
     5761 atgaagtgca tgcgtggaaa aatttacgcc cggttctctg cactccgttg gaatatttaa
     5821 gcaaacccgc tttttccgaa aacagttgct taagcgggta ttttttgccg aatgataagg
     5881 gcacacgaga atggcatagt ttaattaaaa ttttcttcgg gccgttgtca atacgaaaca
     5941 agtatttgct aattcttccg ctgaaaaaac attcattata gcaccaaacc cgatatttgc
     6001 gctcatgaaa aaatttttca tcagctgctt attgctcgga aatattgttt gcctgtctgc
     6061 acaaaatgtt ctttcgccgc gccagttcct gggctatgaa attggagagc attacactcc
     6121 ctgctcacgc gtggtcgatt atttcaacca tgtttcgcag gctattccct caatggtgaa
     6181 ggtgcagaag tatggggaaa caaatgagcg gagagatctc atcgttgcct ttatatcgtc
     6241 ggctgacaat atcaaaaatc ttgagaacat cagaaaaaat aatttgcgcc tggccggctt
     6301 gttaaatgat ggtgtaaatg gagacataaa tgcacccgtg atcgtgtggc ttagttacaa
     6361 tgttcacggc aatgaacctt ccagcagcga agcagccatg aaagtgttgt atgcgctggc
     6421 tgatccgaat aatgctgaaa caaaacaatg gctgcagaat acagttgtag taatcgatcc
     6481 atgtcaaaat cctgacggac gcgaccgtta cattaactgg tttaatactg ccgtcggtaa
     6541 tacatttaac gcagatccgc agagccgcga acatgatgaa ccgtggccac gcggccgcac
     6601 aaaccattat aatttcgact tgaacaggga ttgggcatgg caaacacaaa aagaatcgca
     6661 agcgaaatta aaattgtaca atgactggat gccgcagatc catgttgacc tgcatgaaca
     6721 gggctataat gaaccctatt attttgcgcc cgcagctcaa ccttatcatg aagtaattac
     6781 acaatggcag cgcgacttcc aggttcagat cggaaaaaat aacgcgaaat attttgatga
     6841 gaacgggtgg ttatatttca cgagggaagt gtttgatctt ttttatccgt catacggcga
     6901 cacatatcca acttataatg gtgcgattgg catgacgtat gagcaaggag gcattgaagg
     6961 tggcctcggc ataaagactt taagcggcga taccgttaca ctcgcagacc gcgccctgca
     7021 ccactatacg gccagtttat ccacgattga aataagcgct gcgaatgctc ccaagctggt
     7081 aagccagttc aaaaaatatt tcgatgataa tatcagtggc ggcaacttcg agtacaaaac
     7141 ttacgtgctc acatcaccag ataaaaacaa aatagaggag gtaaaaaaat tgcttgacgg
     7201 gtgcaaaata agttatggta gcttaagcaa cgcgaatttc agcggctaca attatttcag
     7261 caacaagacc gaaatttata cgaacgaagg ctatcaaatt gcaattaccg caatgcaacc
     7321 taaagggcgc ctcgtaaaag ttttatttga acaacaaagc cggcttgtcg attcgtcaac
     7381 atatgatatc actgcgtgga gcattcctta ttcttacgga gtgaacgcat gggccgtaaa
     7441 agaaaaatta cctgttgcgc catactcttc ggcaactggt atttcaaata tagaaagcag
     7501 ctacggtgta ttgatccctt atacctcttt taatgcttcg aagctgcttg cctacatttt
     7561 gaaaaacaag gttcgtgttc gttatgcaac aagttctttc aaatacaacg aaagaacatt
     7621 tgaacgaggc acgcttatca tcttaaaagg aaataatgtg cctgactgga ctttcgttgt
     7681 aaacaccgga tgcaacctct acaacatcca gccttacgcc gtgcagacag gcttcatgga
     7741 aacgggcgca gattttggtt ctgactacgt ccatatcgta aaagcaccgc gcgttgcagt
     7801 gcttacaggc gatgatgttt ctgcgtctgc cgcaggtgaa gtttggtgtc tatttgataa
     7861 tgaattgaat tatcccatct cgcagttgaa caccgagcac cttcaagata tcaatcttga
     7921 aaagtatgac gtactgataa tgccggatgg tgattacgat gcttttgatg ataagttggt
     7981 tgtttcgaag cttgacaatt tcgtgaggaa cggcggcaaa ttgattgcaa ccgaaggcgg
     8041 cgcagaaaag ctcgctgaat ttacctggag cggtttcaat ttgataaagg atactgcgca
     8101 gtcatcggac agcatcattc aaagaaaata tggtaacgct gcaagagaaa gcctcacacg
     8161 attcattcct ggtgcgatct acaaattaca attagacaac acacatccgc tggcatatgg
     8221 ttatcccggt tattattata cgctgaaaca agatagccgc gtttatcaga atgtaaaaaa
     8281 tggttggaat gttggcatac tgccggcgaa tgcatacgtc gctggcttcg taggcagtaa
     8341 gctaaaaact caattaagca caggtgtatt gatcggcgag cggcaatatg gagaaggcaa
     8401 cattgtggtc ttaaa
//
LOCUS       DASQJI010000782         2301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1653830,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000782 DASQJI010000000
VERSION     DASQJI010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653830"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2301)
                     /locus_tag="VEV83_20670"
     CDS             complement(<1..>2301)
                     /locus_tag="VEV83_20670"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HYK47609.1"
                     /translation="MRNYKHLNLLLAAFLLVVFSSPALAQTEKKITGTITKQSGEALS
                     NVSVTIKGTSHGAMSDSKGEFSMTVPENATLVISYVGYKTKEVSAKDQTSFNIILEEE
                     QNELSQVVVIGYGTVKKSDLTGSVSSVKEQDLKVVPVTSFDQALQGRAAGVQVTTLSG
                     KPGAETSIRIRGTTSINAGNEPLYVIDGMLVSSDAGDMSTGVTLGPRISALAAINPSD
                     IESIEILKDASATAIYGSRGANGVVIITTKRGKPGTGTVTFDSYYAMQDVAHKVEVLN
                     AAEFADFVNDAKLNANRTPIYVNPKNLGEGTDWQDELFRKAPMANFQVSFSGADDKTK
                     YNISGGYFDQDGIIINSNFKRYSFRANLDREVNKRLTVGNSITYARITSSGVLTNAGT
                     IVPGVVTGALLFNPVLPVYDSTVKGGYTFENDRGTILGNPIADAKEYNSYTTSSRILG
                     NIYARYKITKDLELKTSFGIDGFAQKENSFGPNFLKRTQASQGEAAIGTVQGLTWLNE
                     NTLTYNKSWNDKHSINAVAGFTLQQFNNESLFAYSFDFPDGRTGWHDISAGLQPQESV
                     NGESAWSLVSYLGRVNYTLSDKYLFTLTGRADGSSKFGEGQKYGFFPSGAFAWRVSKE
                     KFMDNVSSISDLKLRVSYGIIGNQAIPPYQSLALVGPYGQGVFNSSAGYEVYTGLEPL
                     SYVNPNLKWESTKQFDVGFDFGMLKQRITITADYYYKLTYDLLLSTPIPTTTGFQTTV
                     LNVGNISNHGFDLDIHSVNTTGKLKW"
BASE COUNT          569 a          557 c          507 g          668 t
ORIGIN      
        1 tccattttaa ttttcccgta gtattgacgg aatgaatatc aaggtcaaag ccatggttcg
       61 aaatatttcc aacattcagc actgttgtct ggaaccctgt tgtggtagga atgggcgtag
      121 aaagcaaaag atcgtaggta agtttataat aataatccgc ggtaatagta attcgctgtt
      181 taagcatgcc gaagtcgaaa cccacgtcga attgctttgt gctctcccat ttcaggtttg
      241 ggtttacata actgagtggt tcaaggcctg tatacacctc atatcctgcc gagctattga
      301 acacaccctg cccgtacgga ccgacaagtg caagtgattg atatggggga attgcctggt
      361 taccgatgat accataactc acacgcagtt taaggtcgga gatcgaagaa acattatcca
      421 tgaacttctc cttcgacaca cgccatgcaa aagcaccgga cgggaagaaa ccatatttct
      481 ggccttcccc aaacttggaa gaaccgtcag cgcgaccggt taacgtgaaa agatatttat
      541 cactcaaggt ataattcacg cgtcccaaat aagagacgag tgaccatgct gattcgccat
      601 tcaccgattc ctgcggttgc aacccggccg aaatatcatg ccagccggtt ctgccatccg
      661 ggaagtcgaa tgaataagcg aataaacttt cattattgaa ttgctgcagc gtaaaaccgg
      721 caaccgcgtt tatgctatgt ttatcattcc agctcttatt ataggttaat gtgttttcat
      781 tcaaccacgt caggccctgg acggttccga tagcagcttc cccctggctg gcctgtgtac
      841 gttttaaaaa gttcgggccg aacgaatttt ctttctgtgc gaatccatcg atgccgaaac
      901 ttgttttcaa ttccaggtct tttgtgatct tatatcgtgc ataaatattg cccagtatcc
      961 gcgagcttgt cgtgtaagaa ttgtattctt ttgcatccgc gatcgggttg ccgagaatgg
     1021 ttccccggtc gttctcaaaa gtataacctc cttttacagt tgaatcgtaa actggcagca
     1081 ccgggttaaa caagagcgct cctgttacaa cacccggaac aatagtgcct gcgttggtga
     1141 gcacaccaga ggatgtaatt ctcgcatagg ttatgctgtt acccacggtt aaacgcttgt
     1201 tcacttccct gtcgaggttt gcgcggaaac tatatctttt gaaattggaa ttgatgatga
     1261 tgccgtcctg gtcgaaataa ccaccggaga tgttgtactt tgttttatca tcagctcctg
     1321 aaaaggagac ctggaaattt gccatgggcg ctttcctgaa caattcatcc tgccagtctg
     1381 tgccttctcc taaatttttc ggattcacat atatcggcgt gcgattcgca ttcagcttgg
     1441 catcatttac aaaatctgcg aattctgctg cgttcaacac ttctacttta tgggcgacgt
     1501 cctgcattgc gtaatatgaa tcgaaagtta ccgtacccgt tcccggcttg ccgcgtttcg
     1561 tggtgatgat gaccacgcca ttcgcaccgc gtgatccata gatcgctgtc gccgatgcgt
     1621 ctttcaaaat ttctatcgac tcgatgtcgc ttgggttaat tgccgccaac gcgctgatgc
     1681 gcggaccgag tgttacgccg gtcgacatat cgccggcatc gctgcttaca agcattccgt
     1741 caatcacgta caatggttca ttacccgcgt tgatagaggt cgttcctctt atgcgtatgg
     1801 aagtttcggc gccgggtttg ccggacaaag ttgtgacctg cacaccggct gctcttccct
     1861 gcaaagcctg gtcgaaagaa gtaacaggta cgacttttaa atcctgctct ttcacggatg
     1921 aaacggagcc ggtaagatca cttttcttga ccgtaccgta gccgatcaca acaacctgtg
     1981 ataattcgtt ttgttcttct tcaagaatga tattgaatga tgtttgatct tttgcagaaa
     2041 cttcttttgt tttatatccc acatatgaaa ttacgagcgt tgcattttca gggacggtca
     2101 tgctgaattc tcccttacta tcagacatcg ctccatggct agtgcctttt atggtcacgc
     2161 tcacattact caacgcttct cccgattgct tcgtgatagt cccggttatc ttcttctcag
     2221 tctgcgctaa tgccggagac gagaacacga caagtaaaaa tgcagcaagc agtaagttca
     2281 gatgtttata gtttctcatt a
//
LOCUS       DASQJI010000783         3621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3037035,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000783 DASQJI010000000
VERSION     DASQJI010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037035"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(589..1302)
                     /locus_tag="VEV83_20675"
     CDS             complement(589..1302)
                     /locus_tag="VEV83_20675"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK47610.1"
                     /translation="MKYYALFACAMFLSAAGHTQKLINDANAVKRNASSFHAIDIGSG
                     IDLYLSQGSDEAVAVSASKPEYRDKIITEVKDGVLKIYYDHDYLHWGGGDRKMKAYVS
                     FRTLDELHAGGGSDVYTDGSIKSNNLSVGLSGGSDFHGSINATDLTMSASGGSDIYVT
                     GTTKSLNVDASGGSDFHGYDLITDNCDVDASGGSDIEITANKEMNIGASGGSDIRYKG
                     AGVIKNLDRSGSSDIRRVN"
     gene            1505..3004
                     /locus_tag="VEV83_20680"
     CDS             1505..3004
                     /locus_tag="VEV83_20680"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK47611.1"
                     /translation="MKKAFAFLLIIVCYKTIAQDKSGQISKRFDSYIQNALQLWKTPG
                     LSVTVVKDGQVVFKQGYGVTELGKNDPFTTSTVSICASTTKAMTAVCMGMLVDEGKIN
                     WTDKVSNVYPPFKLYDNYANSEITIEDLFTHNTGLGNADNLWAFDYPVDSIIHQMRLI
                     KPAYSFRSSFIYQNLMYLVAGEVIHKVSGKPWAEFIQQRLFSPLGMQHTYPGFKQSAA
                     EPSHITPHYMYEDSVIKPIPMIDYRSVGAAGGVWSCADDISKWMLFLLDSARVDGRPL
                     LKPETYREIFKPHSIVTESEFYPTARLTKPHFTTYGLGWFQEDYKGKALDFHTGSLDG
                     AVAIIGLVPDDDFGIYVFANMDHTEIRHALMYKAIDLWLLNDDKDDWSKNLYKLYVNL
                     DSAAKKEEQKMEAKRVLNTKASLALKGYTGKYSNEIYGSAEVLLQGDSLLLKLPNNIK
                     LDLGHWNYDTFMGKFEHDWWGKTLVRFDLDADGTVKQFDISGIVYAKDE"
     gene            3274..>3621
                     /locus_tag="VEV83_20685"
     CDS             3274..>3621
                     /locus_tag="VEV83_20685"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HYK47612.1"
                     /translation="MAVRIFITGGTFDKEYNELNGELFFKDSHLPEMLRLGRCKVNVD
                     IRTLMMIDSLEMTDEDRELIARHCETCEENQIVITHGTDTMTDTAKILADKIRDKTIV
                     LTGAMVPYKFGSSD"
BASE COUNT         1043 a          809 c          818 g          951 t
ORIGIN      
        1 caatctttta cattgtgagt cgttttaagc tgctcgagta agatcgattt taaagtaggc
       61 acggcgttgt tttgagcctg caatgcgcca acgttaaaga caagcagcgc agcgatgatc
      121 catttcataa ttcagtttta agaaaatttg tacacaaaga tgagctggtt tgaaattcaa
      181 caacctgaat ttttaggctt atttcatttc gtcggccatg aaatgcgcat tgattaagtt
      241 atctgatgaa aactgaatct gaaaaatata gtatggataa aactgttttt actaagtcaa
      301 cggctcagga gccggggacc attatagcta ttggaagagc aaatcatatc aagagcgctt
      361 cgatgcagga tgttacctca taaatcaaat ctatggtact acggcgcaga ctcccttaaa
      421 taaaaccgtt ttcagcaaac gcaggcatga gcatcgctga tctttttaat caaaattttc
      481 tggattttgc agcgtctaag acaatacagg ttgattatgt agcggttgaa gacagggtcg
      541 gcattttaga cctcgtacaa attttcgggt ttaaattaac aaggcttatt agttcacccg
      601 tctaatatct gatgaaccgc tgcggtccag gttctttata acaccagcac ccttatagcg
      661 tatgtcgcta ccaccgctgg cacctatatt catctcttta tttgccgtga tctctatatc
      721 acttccgccg ctcgcgtcca catcgcaatt atctgtgata agatcatacc catgaaagtc
      781 actgccgccc gacgcgtcga cattcaaact ttttgttgta cccgttacat aaatgtccga
      841 cccgccgctg gcactcattg taaggtctgt tgcgtttatc gacccatgaa aatcgctgcc
      901 gccagacaga ccgactgaaa ggttatttga ttttatgctc ccgtccgtat acacatcgga
      961 accgccgccg gcatgaagtt cgtcaagcgt cctaaatgaa acatacgctt tcattttgcg
     1021 atcgcctccg ccccaatgca agtagtcgtg gtcataataa atcttgagca caccatcttt
     1081 cacttcagtg atgatcttgt cacgatactc cggttttgag gcgcttactg caactgcttc
     1141 atcgctgccc tggcttagat acaaatcaat gccagaccct atgtcaatag catggaagga
     1201 gcttgcattg cgcttcacag cgttcgcatc attgatgagc ttttgcgtat ggccggccgc
     1261 ggaaagaaac atcgcgcagg caaataaggc atagtatttc atgatagaga agttggtatg
     1321 agacgacgga aggcagcaat aagttacagc gaaattcaaa aaaattgtat gatgctgcgc
     1381 tcacggtaag ctttcggtcg cgtgcagatc gatgccagtg ctgttttcaa aaacgcactt
     1441 tgcaatgagt aacaaaacaa gaaatcatca aacataatta tattgccggc gaaacatttt
     1501 gcttatgaag aaagctttcg ccttcctgct aataattgtg tgctacaaaa ccatcgcgca
     1561 ggacaagtcg ggccaaatct caaagcggtt tgacagttat atccaaaacg cgttgcagtt
     1621 atggaagacg ccaggccttt ctgttacggt ggtcaaagac ggccaggtgg ttttcaaaca
     1681 aggatatggc gtgacggaac ttggcaagaa tgatccattc acaacatcaa cggtatccat
     1741 ttgcgcttct accactaagg cgatgacggc cgtctgcatg ggaatgctgg tagatgaagg
     1801 aaagataaat tggacagata aagtaagcaa cgtgtatccg ccttttaaat tgtacgataa
     1861 ctatgcaaac agcgagatca ccattgaaga tctttttacg cataacaccg gtctcggcaa
     1921 tgctgataat ctttgggcgt ttgattaccc tgttgatagc attatccacc agatgcggct
     1981 gataaaaccg gcttattcgt ttcgatcttc attcatctat caaaacctca tgtacctggt
     2041 ggctggggaa gtgattcaca aggtgtcagg caagccatgg gctgagttca tacaacaaag
     2101 attgtttagt ccattgggaa tgcaacacac ctaccctggc tttaaacaat cggcggcgga
     2161 gccaagccac atcacaccac attatatgta cgaagacagc gtaataaaac cgatcccgat
     2221 gatagattac aggtcggtgg gcgctgcggg cggtgtttgg tcttgcgctg atgacatcag
     2281 caagtggatg ttgtttttac tcgacagtgc cagggtcgac ggccggccac ttctgaaacc
     2341 ggaaacatac agggaaatat ttaagccaca ctcaatagta acagaaagcg aattctatcc
     2401 tactgccagg ttaactaaac cacatttcac aacttatggg ctcggctggt tccaggaaga
     2461 ttataaagga aaggcactgg acttccacac cggcagtctt gacggcgcgg ttgctattat
     2521 tggtctcgtg cccgatgatg acttcggaat atatgtcttt gcgaatatgg accatacgga
     2581 aatacgccat gctcttatgt ataaggcgat cgacctgtgg cttttgaatg atgacaagga
     2641 tgattggagt aaaaatcttt ataaactcta cgtgaacctt gactcagccg caaaaaagga
     2701 agagcaaaag atggaagcta aacgtgtgct taacacaaaa gcttctcttg cgctgaaagg
     2761 atatacagga aagtattcga acgaaattta tggcagcgca gaagttctac tacaaggcga
     2821 ttcgcttttg ctaaaattgc caaacaatat caaacttgat ctcggtcatt ggaactacga
     2881 cacgttcatg ggaaagtttg aacacgactg gtggggcaag acgctggtac gatttgacct
     2941 cgatgcggac ggcaccgtga aacagtttga catttcagga atagtatacg caaaggatga
     3001 ataggctgtc acgataaaca cggtcagacg gctccgcgcc gtcagaccga taattaaatt
     3061 caattcaata ccattcttcc ttccgtccgc gaaaaaaact acacccgctt acttgcgagc
     3121 gaggttgttg cgctcagacg cttcaaaagc gttagaccgg tgcgcccgat ctgctgccgc
     3181 tcagcgcggt cagaccgata gcatctctgc gagcgcatat tagatgcttt tatgaattga
     3241 tagttacttt tacagcgtca aagcactttc tttatggccg ttcgcatttt tattacaggg
     3301 ggcactttcg ataaagaata taacgagctg aatggtgaac ttttttttaa agattcgcac
     3361 cttcctgaaa tgcttaggct tggacgctgc aaagtgaatg ttgatataag gacattgatg
     3421 atgattgaca gcctcgagat gaccgacgaa gaccgggaac ttattgcgcg gcattgcgaa
     3481 acatgcgagg aaaaccagat cgttattacg catggaaccg ataccatgac agacaccgca
     3541 aaaattcttg cagacaagat ccgtgacaaa acgatagtgc ttacaggcgc aatggtcccg
     3601 tataaattcg gcagctcgga c
//
LOCUS       DASQJI010000784         5606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1962908,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000784 DASQJI010000000
VERSION     DASQJI010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5606
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962908"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VEV83_20690"
     CDS             complement(<1..642)
                     /locus_tag="VEV83_20690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HYK47613.1"
                     /translation="MAQSNDKNFLKTERTLSEEIRDSHKALTDLWQGVTAFEKVKNCV
                     TVYGSARFKEGHPYYELARSMGKALAENGFTVMTGGGPGVMEAANRGAKEGGGTSLGC
                     NIILPFEQKLNPYIDTQVEFEFFFTRKVILRKNSVAYVLMPGGFGTMDEIFEVLTLIQ
                     TGKLPPRPVVCLGKSYWQHLGTFLRETMLEVGTISESDMDLALVTDKVHEAVDY"
     gene            complement(646..2043)
                     /locus_tag="VEV83_20695"
     CDS             complement(646..2043)
                     /locus_tag="VEV83_20695"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK47614.1"
                     /translation="MKVRLKFFGGAGEVTGSKYLLQIDDFNLLVDCGLFQGRKELRQL
                     NWDEFPIDPSAIDAVVLTHAHLDHTGYLPRLFRNGYSGDVYCTTATADLMNLILMDSA
                     RLQVEQANYARRTGYSQHKDPEPLYTPDDVTAINDHIKSYGFEETTNITDRIKLTFYN
                     AGHILGAAIVELTVYGEEQTKKIVFSGDLGRYNDPILLPPHIIQEADILFVESTYGNR
                     AVKQTDREDIIAMMNETFERDGNLVVPAFSIGRTQTLLMYLKNVLVSKEIPAVKIIVD
                     SPMAISATAFYRKHQDYHKLRGIDLDEDESFMTLRKNLTISRTPAESRSINDITHDSV
                     IIASSGMMTGGRVLHHLLHRLPDPDNVVLITGYQPEGSRGRQLQEGAKTIRIFGQDVP
                     VKAKVFTINGLSAHADKDELMRWLDGFVKPPKETFIVHGEAESANALASALMAKGWNA
                     TVPHYLENVELFKHI"
     gene            complement(2078..3757)
                     /locus_tag="VEV83_20700"
     CDS             complement(2078..3757)
                     /locus_tag="VEV83_20700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HYK47615.1"
                     /translation="MQKIRSYLPITEWLPRYKSANFRWDLVAGITLAFFVLPESMAYA
                     TLAGVPTYFGIYCCLAGGLLFALFTTSMQVVPGPTSAISLMVGTTVAVLSGGDLQRWA
                     AIAELTALVVACICFIAYIFKLSALVNFISDSILFGFKAGAALSIMVTQLPKLFGVEG
                     GGSNFFERLVTLFRHLPETNWVVLGFGVVALLVLIVGEKILPGKPVSLIVVIGSIVII
                     SVTRLSAQGIHVTGEIPKGLPSLGRPSLRLSDVDGVMGLAFACFLMGYIETISAARTF
                     ATKNNYTINPRQELLSLGFANFATAFSHAYVVSGGLSQSTVNDKSGAKTPLSLIICSA
                     TLGVILLYFTGFLKNLPEVILAVIVLHAVSGLIKVKELKNIYRLSKAEFGVAMIALAG
                     VLVLGILKGVMLAVVMSLIFLIRRTAQPTVAVLGRIGKSNHYSDVQRHPDNIVLKNLL
                     ILRIESAILYFNADYIREKILSSMRSYGADLRFLILDLSASTFVDVAGSKMLLQLSDE
                     LQKKNMSLKIVEALSNVREILRKQGMEDIIGHISRRTSIEDAVQQFETATV"
     gene            complement(3863..5200)
                     /locus_tag="VEV83_20705"
     CDS             complement(3863..5200)
                     /locus_tag="VEV83_20705"
                     /inference="COORDINATES: protein motif:HMM:NF009136.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter family
                     protein"
                     /protein_id="HYK47616.1"
                     /translation="MIWLQLAVLLAMILIGSRLKGIGLGLMGILGMFIFVQVFRMRPT
                     APPGDVMLIIISIVTTAAALQAAGGLDYLVYLAEKIIRKNPKQITFIAPVAVFVLCLF
                     AGTAHIVYSLLPVISEVSTKTRIRPERPLSISVIASHLALTGSPMSAATAAMAAVLMF
                     PGASLEIMKVCIPACFIGTLVGAVSVWKMGKDLDKDPEFLEKMKDPEFAKSLDAESVS
                     SGKDIKPQAKIAVLIFCVAIIMVLIGGAFPQFVPSMAPGTPNFSISADGSLKMVTIIE
                     IVTLSAAALIVLITKTSPAQVVKASLFSSMASAMISVFGVVWMSSTFMAHNEAAIKGA
                     LSGITTNHPWTFAIAIFIMGMLMFSQAATTKAMMPLGLTLGLPVATLVSIFPATNSVF
                     VLPGYPTLLAAINVDRTGTTKIGKYVINHSFMRPGLVAIIVSIVVGFLLSKIY"
BASE COUNT         1547 a         1354 c         1202 g         1503 t
ORIGIN      
        1 ataatctaca gcttcatgaa ctttatcggt taccaacgca aggtccatgt ctgattctga
       61 tatggtccca acttcgagca tcgtctctct caaaaaagta ccgaggtgct gccaatagct
      121 ttttcctaaa caaacaaccg gtcttggtgg aagtttgcct gtttggatca gggtgagtac
      181 ttcaaaaatt tcatccatag taccaaaccc tccgggcatc aatacatacg caacagaatt
      241 tttccttaag atcactttgc gtgtgaaaaa gaattcaaac tcgacctgcg tatcaatata
      301 aggatttaat ttttgttcga atggaagtat aatgttacaa ccaagggaag tgccacctcc
      361 ttcttttgcc ccgcgatttg cagcttccat tacgcccggt ccaccacctg tcattacggt
      421 gaagccattt tcagccaagg cctttcccat gctccgtgcg agctcgtaat atggatgacc
      481 ttccttaaac cgtgcggacc cgtagaccgt aacacagttt ttcacttttt caaaagcggt
      541 tacgccctgc caaagatcgg tgagcgcttt atgcgaatcg cgtatctctt cagaaagcgt
      601 tcgttcagtc tttaaaaagt tcttatcgtt gctttgtgcc atgttttata tatgtttaaa
      661 aagctcaacg ttctcaagat agtgcggtac agtcgcgttc catccttttg ccataagcgc
      721 agaagccaat gcattcgcgc tttctgcttc gccgtgaaca atgaaagtct ctttcggcgg
      781 tttgacaaac ccatcaagcc agcgcattaa ttcatcttta tctgcatgtg cggagagacc
      841 gttgatggtg aacacctttg cttttaccgg aacgtcctgc ccgaagattc gaattgtttt
      901 tgcgccctcc tgtaattgtc ttccgcgtga tccctccggt tgatagcccg taatgagaac
      961 tacattgtcg ggatcgggca gacgatgtaa aagatgatgc aacacgcggc cgccggtcat
     1021 cattccgctg gaagcgataa taacggagtc gtgtgtgatg tcgttgatgc tgcgcgattc
     1081 ggccggcgta cgtgagatcg ttaaattttt tctgagcgtc atgaatgact catcttcatc
     1141 aagatcgatc cccctcagct tatgataatc ctggtgttta cggtaaaagg ctgtagcgga
     1201 gatagccatc gggctatcga caataatttt aaccgccgga atttctttac tcaccaaaac
     1261 attcttcaga tacatcagca atgtttgtgt tctgccgatg gagaacgccg ggaccacgag
     1321 attgccgtcg cgttcgaacg tttcgttcat catggcaatg atgtcttccc tgtccgtttg
     1381 tttaaccgct ctgttcccgt acgttgattc gacaaaaagt atgtctgctt cctggatgat
     1441 gtgtggtggc aaaagtatcg gatcgttata ccggccaaga tcgccggaga aaacaatttt
     1501 ttttgtttgt tcctcgccgt acaccgtcaa ttcaacaatg gctgcaccca ggatatgccc
     1561 tgcgttgtaa aacgttagct ttatcctgtc agttatgttt gtggtttctt caaagccgta
     1621 tgatttaata tgatcgttga tcgccgttac atcatcgggt gtatataaag gttccgggtc
     1681 cttgtgttgc gaataacctg tccttctagc gtagttagct tgttcaacct gtaatcttgc
     1741 cgagtccatc aggatcaaat tcatcaggtc cgctgttgca gttgtgcaat atacatctcc
     1801 gctgtagccg ttacggaaca aacgcggaag ataaccggtg tgatcgagat gggcatgagt
     1861 taggaccacc gcatcaattg ccgacgggtc aatgggaaat tcatcccagt tcaattgcct
     1921 taattctttt cttccctgga agaggccgca atcaacaagc aaattgaagt catcaatttg
     1981 cagaagatat ttcgacccgg tgacctcacc ggcacctcca aaaaatttca gccgtacttt
     2041 catgaatggc gtttattttt tttgcgggct tagcgtttca aacagtagcc gtttcaaatt
     2101 gctgcacagc atcttcaatg gaagttctcc tgctgatgtg cccaataata tcttccatgc
     2161 cctgtttacg taaaatttcc cttacattag aaagcgcctc gacgatcttt aagctcatgt
     2221 tttttttctg caattcatct gataactgca acaacatttt tgagccggcc acatctacaa
     2281 aagttgaggc ggaaagatcc agtatcaaaa accggagatc agctccataa ctcctcatgc
     2341 tgctgaggat cttttccctg atataatctg cattgaaata aagaatggcc gattcgatcc
     2401 taaggatgag aaggttcttc aaaacgatat tgtcgggatg acgttgcaca tctgaatagt
     2461 gattgctctt gccgattctt ccaagcacag caaccgttgg ctgagcagta cgccttatca
     2521 ggaatatcaa tgacatcaca acggcaagca tcactccttt caagattcca agaacaagca
     2581 cacctgcaag tgcgatcatc gctacgccga attcagcctt gctgagccgg taaatatttt
     2641 tcagctcttt tacttttatc aaccctgaca ccgcatgcaa cacaatcact gccaggataa
     2701 cttcgggaag attcttaagg aacccggtga aataaagaag gatcacgcct aacgtggcag
     2761 agcaaataat gagtgacaag ggcgtcttag ctcccgactt gtcgttcact gttgattgtg
     2821 ataagccacc tgataccaca tatgcatgcg aaaaagctgt tgcaaaattt gcgaacccga
     2881 gagaaagcaa ttcctgccgc gggttgatcg tgtaattatt ttttgttgcg aacgttcgag
     2941 ccgcagaaat tgtttcaata taacccataa gaaagcaggc gaatgcaagt cccattacac
     3001 cgtccacgtc acttaatctc agtgatggcc ttcccagcga cggcaatcct tttggtatct
     3061 cccccgtaac atgaatgccc tgcgcagaaa gtcgtgtaac ggaaatgata acgatagaac
     3121 cgatcacgac gattaatgac accggtttgc cgggcagaat cttctcgcca acgatcagca
     3181 ccaaaagtgc cacgactcca aagccgagca caacccaatt tgtttccggt aaatgacgga
     3241 ataaagtgac caatcgttca aaaaaattac tcccccctcc ttctactcca aacagttttg
     3301 gcaattgcgt caccatgatc gataaggcgg caccagcttt gaatccaaag agaatactgt
     3361 cgctgatgaa gttgaccaac gcgcttaatt taaaaatata agcgatgaaa caaatacagg
     3421 caactacgag tgcggtgagc tcagcgatcg ccgcccagcg ctgaaggtct ccgccggaaa
     3481 gcacagcgac ggtagttcca accatcaatg aaattgctga agttggtccg ggaacaactt
     3541 gcatggaagt ggtaaaaagc gcaaaaagta atcctcctgc aaggcaacaa taaatgccaa
     3601 aatatgtggg cacgccagcc agcgttgcat acgccattga ttccggtaac acaaagaacg
     3661 caagtgttat tcctgcaaca agatcccatc tgaagtttgc tgacttgtat cgcggcagcc
     3721 attctgtaat cggcaggtac gatcttattt tttgcatgac ggaatcttcc ctctaattat
     3781 gagtaccatg ttttgcggcc acgtggtctt ctgctttttt ccagttgaat gatcgcattg
     3841 ctgaaacgtt gtgaaaacag gatcagtaaa tcttacttaa taaaaatcct actactatcg
     3901 agacaatgat cgcgacaagg cccggcctca tgaaactgtg attgatgaca tacttaccaa
     3961 ttttcgttgt gccggtgcgg tcaacattta ttgcagccag taatgttgga tatccgggta
     4021 aaacaaaaac gctgtttgtt gcgggaaaga tggataccaa tgttgcaacg ggcaaaccga
     4081 gtgttaatcc caacggcatc attgctttcg tagttgcggc ctggctgaac ataagcatac
     4141 ccatgataaa gatcgcgatc gcaaacgtcc acgggtggtt tgtggtgatg ccgctcagag
     4201 caccttttat cgctgcttca ttgtgcgcca taaatgtgct gctcatccat acaactccaa
     4261 acacgctgat cattgctgat gccattgagc tgaacaaact tgcttttacg acttgagcag
     4321 gcgaggtttt agtaatcaga actatgagtg cagccgcaga caaagtaacg atctcaataa
     4381 tcgtaaccat cttaagagaa ccatcggcac taatgctaaa gttcggagtg ccgggagcca
     4441 tactcgggac gaactgcgga aaagccccac cgatcagaac catgatgatc gcaacgcaaa
     4501 aaataagcac ggcgatcttc gcctgtggct tgatgtcctt gccgctgctt acgctttcgg
     4561 cgtccaatga cttcgcaaat tccgggtctt tcattttctc caaaaactca ggatctttat
     4621 caaggtcctt tcccatcttc cacactgata ccgcacccac gagcgtacca atgaagcatg
     4681 caggaataca aaccttcatg atctctaacg aggcaccggg aaacatcagc acagccgcca
     4741 ttgctgctgt cgcagcgctc ataggactac ccgtcaacgc aagatgagac gcgatcacag
     4801 aaatacttaa aggccgttcg ggccttattc tggttttagt tgatacctcg gagatcacag
     4861 gcagcaaaga ataaacaatg tgagctgttc cggcgaacaa gcaaagaacg aatacagcaa
     4921 cgggagcaat gaaagtaatt tgttttggat tttttcggat gatcttttcg gcgagataca
     4981 caaggtaatc aagcccgccc gcagcctgca atgccgccgc tgtagtaacg atcgaaataa
     5041 taatgagcat cacgtcgccc ggcggtgcgg tcggcctcat tcgaaaaact tgcacaaaga
     5101 tgaacatgcc caatatgccc atcaatccaa gaccgatccc ttttagtctt gacccgatca
     5161 atatcatcgc aagtagtacg gcaagctgaa gccagatcat aagcgaaaag tttttgaatt
     5221 aaagttttcg agctcaatga aaaatttcga atcctcgtaa caagcagttg aaaccagatc
     5281 attttattat ctcacgatca tcattctagt cagggatttt tttcatcttg tcctgacctg
     5341 cccttacatc ttactaaagt atttctttca ttcgactgaa ctggccagcg aaccaattta
     5401 accgtaaact gcttattgac tgaatgattt ttgagcgtga tgaagtacag cgtgggattg
     5461 attacataac gtttaaaaag aagctgtgag ctgtgagcgt cgagccgcga gcgcatactt
     5521 cagttaaaat caaaagttat tacttgctaa aagctcgtag ctaatagctc aaagcttaaa
     5581 aaaatgattc agcaggaaag ccgtct
//
LOCUS       DASQJI010000785         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_734289,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000785 DASQJI010000000
VERSION     DASQJI010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734289"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VEV83_20710"
     CDS             complement(<1..246)
                     /locus_tag="VEV83_20710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK47617.1"
                     /translation="MKIEQIYTGCLAQGAYYVESNGEAAMIDPLREVDTYIEKATADG
                     AKIKFVLETHFHADFVSGHLDLATKTGATIVYGPTAAP"
     gene            complement(336..1124)
                     /locus_tag="VEV83_20715"
     CDS             complement(336..1124)
                     /locus_tag="VEV83_20715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HYK47618.1"
                     /translation="MEIAGYIAAALIGISLGLVGGGGSIFTMPILVYLFGVSPPLATS
                     YSLFVVGSTSLVGAVSNYKKGLINIKAALHFGFASIATVFLTRKFVVPALPKQVVIGS
                     VTISESVIIMCLFAVLMVFASVSMITFKIRNQGDVPAESNHDVFKLFSYGVAIGIITG
                     LLGAGGGFLLIPTLVLLGHMPMKKAIGTSLLIIAMNSLIGFAGDIGHFNIDWLLLVKI
                     TSIAVAGIFVGGYIGKEIPGHKLKNAFGWFVLVVGIYIIIKEFF"
     gene            complement(1498..>1758)
                     /locus_tag="VEV83_20720"
     CDS             complement(1498..>1758)
                     /locus_tag="VEV83_20720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYK47619.1"
                     /translation="LQTIDHIAFRNMDERLMFYLKRQQQILNTRFLKLSNTEIAQELN
                     SSREVISRLMRKLSDKGFIKLKRTHVEIINVDMPDVTLVTAN"
BASE COUNT          511 a          387 c          374 g          486 t
ORIGIN      
        1 tggagcagcg gttggaccgt atacgattgt tgcgccggtt tttgtagcca ggtcgagatg
       61 acctgaaaca aagtctgcat gaaaatgtgt ctcaagaacg aatttgatct tcgcaccatc
      121 ggccgttgct ttttcaatat atgtgtctac ttcgcgtaaa ggatcgatca tagccgcttc
      181 tccgttactt tcaacataat aagcaccctg cgcaagacaa ccggtataga tctgttctat
      241 tttcatcggt tcaaatgtta gattgtgtaa aattgataat gtacagcgcg aattactgtg
      301 actaaaatca cagccacttg tttttatcat ttattttaaa aaaattcttt gatgattata
      361 taaatgccca caaccaggac aaaccagcca aaagcatttt ttaatttgtg tccggggatt
      421 tcttttccaa tatagcctcc gacaaaaatg cctgcgaccg cgatgctcgt tattttgacc
      481 aggagcaacc agtcgatatt gaaatgtcca atatcacctg caaagccgat caatgagttc
      541 atcgctatga tcaaaagcga ggtgccgatc gccttcttca taggcatatg cccgagcagc
      601 accaaggtgg gtatcaacaa aaatccaccg cctgcgccca ataaacccgt tatgatgcca
      661 atggcaactc cataagaaaa taatttaaag acgtcgtggt tgctttcggc aggaacatca
      721 ccttgatttc ttattttaaa agttatcatg gatactgacg caaaaaccat cagcacggca
      781 aaaaggcaca tgatgataac cgattcgctg atcgttaccg agccgatcac tacctgtttc
      841 ggcaaggcgg gtacaacaaa tttcctggtt aaaaacacag tggctatcga agcgaagcca
      901 aagtgcaacg cagctttaat attgatcagg ccttttttgt aattactaac agctccgacc
      961 aggctggttg atccaactac gaacagggaa taagatgttg ccagcggtgg ggaaacgccg
     1021 aagaggtaca ctaagatcgg catggtaaaa atagaaccac ctccaccaac caatcctaag
     1081 gaaattccaa tcaacgctgc cgcaatgtat cccgcgattt ccatgtgtcg ttttgtacaa
     1141 agttgagacg gcggctgcga gcaaagtgtg acttttggca caatttgaaa ggatgcgctg
     1201 ccaggaaaaa gttttaacgg tttatgttgt accgatgaag gtggaaagct gacgcacgtg
     1261 atttcaatag acacgttagc tattgcttag tgtggtaatt tgtttttaat agctccataa
     1321 acccatgtgc cggcaatagc gctcagtaca accacaatga tcacgaatgc gcctgtgccg
     1381 atgcgaacaa gggacccggg catgcgccgg ttaatgcgca ccggtgcctt caataatttg
     1441 cttactgaat tgctttttat gcttgctttt tcgaatgcaa agttcaggca gaagcgacta
     1501 gtttgccgtg actaaggtca catcaggcat gtcaacattg attatttcaa cgtgtgtacg
     1561 tttcagttta ataaatcctt tgtcagaaag ttttcgcatc aggcgcgaga tcacttcacg
     1621 cgaagaattt aattcctgcg ctatttcagt gtttgacagc ttaagaaatc ttgtattcaa
     1681 tatttgttgt tgccgcttca aataaaacat caatcgctca tccatattgc ggaaagcgat
     1741 atgatcgatt gtttgcaa
//
LOCUS       DASQJI010000786         3213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1504556,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000786 DASQJI010000000
VERSION     DASQJI010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504556"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VEV83_20725"
     CDS             complement(<1..546)
                     /locus_tag="VEV83_20725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYK47620.1"
                     /translation="MLPQEIQKVFPLFDTTLAEEIAGKAEPRDFKAGDLIMKTGQYMR
                     STILVVSGLIKVFREDEDGNEFFMYYLQPGQACALSMICATKHETSGIMAKAAEDTEV
                     LAIPIKYMDSLMLNYKNWYYFVLETYRSRFEELLQTIDHIAFRNMDERLMFYLKRQQQ
                     ILNTRFLKLSNTEIAQELNSSR"
     gene            745..2031
                     /locus_tag="VEV83_20730"
     CDS             745..2031
                     /locus_tag="VEV83_20730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HYK47621.1"
                     /translation="MKAPINYVTPEQALSIIQSNQRVFVHGSAHTPTYLLEHLAKESR
                     RLQNVEIVSITVLGDIHVDKPECRDNFHINSLFVSAPIRSDVNEGYADYVPVFLSEIP
                     ELIKRNVMPIDVALVHVSTPDKHGYCSLGVSVDIARSAVNHARYVIAQVNPNVPRTHG
                     DGMIHSSRFKAMVYCEDQLHTANFAEKTGPEARKIGEFVAGLVDDKCTLQMGIGAIPD
                     AVLNCLHNHKDLGVHTEMCSDGIIDLVEKDVINNRYKRIHPNKTVSSFAAGSKKLYDY
                     VDDNPSFAFLDIDYVNDPHIIRRNNKMIAINSAIEVDITGQVCSDSIGTYQYSGVGGQ
                     MDFMRGAALSENGKPIIAIPSRTNKGFPRIVPMLKPGADVVTSRAHVHYVVTEYGVAY
                     LWGKNLRQRAKSLIGIAHPDDREALEKACFERFKRF"
     gene            2224..2736
                     /locus_tag="VEV83_20735"
     CDS             2224..2736
                     /locus_tag="VEV83_20735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47622.1"
                     /translation="MDSLFAYIQRLELLAFFSGYALIYTVVVFIAGSAGNNFKTRITS
                     LLPFAYALVGILYLGLQLKNLYPDYSIENMHRAIQQPWLTIWGLLSILFWIPPLAKKP
                     LLSLLHSLVFFILLLKDLFSQISAPTKDMVRNDMNVYTVSLLLNLAAIAFMLLQSFLY
                     TRFKNRKLVK"
BASE COUNT          896 a          693 c          690 g          934 t
ORIGIN      
        1 acgcgaagaa tttaattcct gcgctatttc agtgtttgac agcttaagaa atcttgtatt
       61 caatatttgt tgttgccgct tcaaataaaa catcaatcgc tcatccatat tgcggaaagc
      121 gatatgatcg attgtttgca agagttcttc gaacctggag cgataggttt ccagcacgaa
      181 gtagtaccag ttcttataat tcagcattaa ggaatccata tacttaatgg gaattgcaag
      241 cacctccgtg tcctcggccg ctttcgccat gatgccgctt gtttcatgtt tcgtcgcaca
      301 gatcatcgac aaagcacatg cttgcccggg ctgcaggtaa tacataaaaa attcattccc
      361 gtcttcatct tccctaaaca ctttaataag tccgctcacc accagtattg ttgaacgcat
      421 gtactggccg gttttcatga tgagatcgcc ggctttgaaa tctctcggct ctgcttttcc
      481 ggcaatttct tctgcgaggg tcgtgtcgaa taacggaaag accttttgta tttcttgcgg
      541 tagcatgtag aacagttttt agtttgcgag gaaaggctga atttttcaag agccaaagta
      601 ccaacgcaaa accatccgaa tgttgaccgc tatcagataa caggcaaatt ttcgacatta
      661 caaaacgcca tcaacatcta aagtacctga ccatcatcag gtattgtgcg aaacgtatcg
      721 atagatttgc cgcaaaagtt ttcaatgaaa gctccgataa attatgtgac tccggaacag
      781 gcattgtcga tcatccaatc aaatcaacgc gtgtttgtcc atggcagtgc acacacaccg
      841 acataccttt tggagcacct ggcaaaagaa tcgcgccgtt tacagaatgt cgaaatcgtt
      901 tctatcacgg tgctcggcga catacatgtc gataaaccgg aatgcaggga taattttcat
      961 atcaattcgc ttttcgtgtc agctcccatt cgtagcgatg tgaacgaggg ctacgcggat
     1021 tatgtaccgg tttttttaag cgaaataccc gagctgataa agcgtaatgt tatgccgatc
     1081 gacgtggcac tcgtgcacgt atccacacct gataaacatg gatactgttc gcttggcgta
     1141 tcggttgata tagcgcgcag cgccgtaaat cacgcgcggt atgtgatcgc gcaggttaat
     1201 cctaatgtgc cgcgaaccca tggcgatgga atgatacaca gcagtcgctt taaagcaatg
     1261 gtctattgcg aagaccagtt gcacacggca aactttgcgg agaaaaccgg acccgaggct
     1321 agaaaaatag gcgagttcgt cgccggtttg gtcgatgata agtgtacgct gcaaatgggc
     1381 atcggggcga tccctgatgc agtgttgaat tgcctgcaca atcacaaaga cctcggtgta
     1441 cacaccgaaa tgtgttccga cggaatcatc gacctggttg aaaaagatgt gatcaataac
     1501 aggtacaaga gaatacaccc caacaaaact gtgtcatcat ttgcggcagg ctcaaaaaaa
     1561 ttatatgatt atgttgatga caatccatcg ttcgctttcc tggatataga ttacgtgaac
     1621 gatcctcaca tcattcggcg taataataaa atgattgcga tcaacagcgc catcgaagta
     1681 gatattacag ggcaagtctg cagcgattcc atcggcacgt atcaatattc cggcgtaggc
     1741 ggtcaaatgg attttatgcg cggcgctgca ctgagcgaga atgggaaacc aatcatcgca
     1801 attccgtcgc gtaccaataa aggctttccg cgcatcgtac ccatgttgaa acccggtgcg
     1861 gatgtagtta catcaagagc ccacgtacat tatgtagtta cggaatatgg cgtggcttat
     1921 ttatggggaa agaatttaag acagcgtgca aaatcattga tcggcatcgc tcaccccgac
     1981 gaccgggaag cattggagaa agcgtgcttt gaaaggttta agaggtttta gagtttggtt
     2041 gattggttaa tttgttaact ggtttattgg ggatgtttga agtttgaggt ttgaagtttg
     2101 agctgcgaac tatcgttccc aatgataact acccacttgc gatttggata ctttgatttt
     2161 gaaactcaga gtcgaattgg aaaagcattg acaattcacc attcacattc ttagcttgca
     2221 tctatggata gtcttttcgc ctacatccag cggcttgaat tgctggcttt tttttcaggt
     2281 tatgcattaa tatatactgt cgtcgtgttt atcgcgggca gtgcaggaaa caattttaag
     2341 accaggatca cttctctttt acccttcgca tatgccttgg tgggtatttt atacctgggg
     2401 cttcagctga aaaatttata tccagattat tccattgaaa atatgcaccg tgcaattcaa
     2461 cagccctggc taaccatttg ggggcttctc tcaattctct tctggatacc accacttgcc
     2521 aaaaagccat tgctcagttt attacatagt ctcgtctttt tcattttatt attaaaggac
     2581 ttattttccc aaatatctgc gcctaccaaa gacatggtac gaaacgatat gaacgtttat
     2641 acggtcagcc ttctcttaaa cctcgcagcg attgctttta tgttgctaca atcttttcta
     2701 tacacccgtt ttaaaaaccg taagctcgta aagtaatcgg gactagaact agatatcagg
     2761 gaagttgcca tttgcggaaa ggctctccat ttcatctgag tatcggatca caaaaagggc
     2821 ttcgatattc tctctcgcag ggaaattgta tgaattatat aattgtttgc aataattgta
     2881 taacatttaa aatgcccctg tggccgagct ttacactata aagaattgat cgttacttgt
     2941 agcttttacc tggccggcac tgctctatta ttatcaggaa tgtttaataa aaatcactca
     3001 atattcgcat gaaattattc aagttgagtt gcgggagcct atagcggtca agcatgtaca
     3061 aactccgcag aaatgaaaaa gaacgggcta cgcttaagaa caaacttctc tttaccgcgt
     3121 tattctttac gccttctata agggattatg attcgaatca gataacaggt tgatgatgat
     3181 caggaatttt tattttgtcc aattctattt tgc
//
LOCUS       DASQJI010000787         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1194953,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000787 DASQJI010000000
VERSION     DASQJI010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194953"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /gene="queA"
                     /locus_tag="VEV83_20740"
     CDS             complement(<1..800)
                     /gene="queA"
                     /locus_tag="VEV83_20740"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051075 - S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HYK47623.1"
                     /translation="MKLSQFRFDLPLNLIAQNPTKRREDSRMMVIHRKTGQIENKHFR
                     DILDYFNDKDVFVVNNTKVFPARMYGRKEKTGARIEVFLLRELNKPNRLWDVIVDPAR
                     KIRVGNKLYFGDNDELVAEVIDNTTSRGRTIRFLWEGDDLGFRNMLEFLGETPLPKYI
                     KRKPDEEDKERYQTVYAKYEGAVAAPTAGFHFSRELIKRCEIKGIRFAELTLHTGLGT
                     FRPIEVEDLSKHKMDAEYYRIDEECCRIVNKAKETEHRICSIGTTTMRG"
     gene            1028..1459
                     /locus_tag="VEV83_20745"
     CDS             1028..1459
                     /locus_tag="VEV83_20745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /protein_id="HYK47624.1"
                     /translation="MLKIVYPSYNFRIKKTLGKEFIFDEVRRRWVTLTPEEWVRQNFL
                     QYILRVKNYPGALLSVEKLVNVGELRKRCDIVVYKDSRPWMIVECKEMNVDLNLPVLE
                     QILRYNIGHDVQYLVITNGNNTLAFQLTADSFFEIDELPSF"
     gene            1536..>1783
                     /locus_tag="VEV83_20750"
     CDS             1536..>1783
                     /locus_tag="VEV83_20750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47625.1"
                     /translation="MRKFVRLACLLMLLTPTFIQGQTQPSVDYSWNLVRKNASVIGVS
                     LSDLSKWRISDSYFDKHANAIYVYLQQTYKGIDIDRAV"
BASE COUNT          473 a          402 c          374 g          534 t
ORIGIN      
        1 ccccgcattg tagttgtgcc gattgagcaa atgcgatgtt cggtttcttt cgctttgttc
       61 acgatcctgc agcattcctc gtctatccgg tagtactctg catccatctt atgcttgcta
      121 agatcttcaa cttcaatcgg gcggaatgtc cctaagcctg tgtgcaacgt cagctccgcg
      181 aaacgaatgc cttttatctc acagcgctta attaattcgc ggctaaaatg aaatcctgcg
      241 gtaggtgcgg caactgcgcc ttcatacttc gcgtaaaccg tttggtaacg ctccttatct
      301 tcctcatccg gtttgcgttt gatgtattta ggtaagggcg tttcgcccaa aaactccagc
      361 atgttcctga agccgaggtc atctccttcc cacaaaaaac ggatcgttcg gccccggctg
      421 gtggtgttgt cgataacttc cgcaacgagt tcgtcattat ctccaaaata caatttattg
      481 ccaaccctga tcttcctggc cgggtcaacg atcacatccc ataaacggtt cggcttattc
      541 aattcgcgca gcagaaatac ttcgatcctt gccccggtct tttccttgcg tccgtacatg
      601 cgggcgggaa aaacctttgt attgttaaca acgaatacat ctttatcgtt gaaataatct
      661 aaaatgtccc tgaaatgctt gttctctatt tgacccgtct tacggtgaat caccatcatc
      721 cggctatctt cgcgtctttt ggtggggttt tgggcaataa gattgagagg cagatcaaat
      781 cgaaattgtg aaagtttcat gtgtcggttc ctaatttaga atggcacatt caacccgcct
      841 tccgccttac ggggcggttg tgatgtgcgg cgtaaaaatt taaagtttgc aaaagtaggt
      901 caaaaaaaat tgaattgcat cttttagttg ttctttcttc aatcaagaca ttcccgcaaa
      961 gattgtgctg gcataagcag cacagcagga aaaagccaca aatattaaag atccgcaagt
     1021 attacacatg cttaagatcg tttatccttc atacaatttt cgaattaaaa aaacgctcgg
     1081 gaaggaattt atttttgatg aagttcggcg tcgatgggta acattgaccc ctgaagaatg
     1141 ggttcggcaa aattttttac aatacatcct gcgtgtgaaa aattatcccg gggcattgct
     1201 gtcagttgaa aaactggtca acgttggaga acttagaaag cggtgcgaca tcgtggtata
     1261 taaagatagc cggccctgga tgatcgttga atgtaaagaa atgaacgtcg atcttaattt
     1321 gcctgtgctt gagcaaatcc tgcgctacaa catcgggcac gatgtacagt atcttgttat
     1381 taccaatggc aacaataccc ttgcgtttca gctcacagca gattcttttt ttgaaattga
     1441 tgaattgccc tcattctaat tttttcatgc gtgcctgtgc catttcaatt atttctataa
     1501 attgctttgt cataagcacc cttttaaagt aaactatgag aaaatttgta cgcctggcct
     1561 gtttacttat gctgctaacg ccgaccttca ttcaaggcca aacccaaccc tcggttgact
     1621 actcatggaa cctggtaaga aaaaatgcat cggtgatcgg agtttccctg agcgatctaa
     1681 gcaaatggag aatttctgat tcatattttg ataaacacgc gaacgccata tacgtttatt
     1741 tgcagcagac ttataaagga attgatatag accgggcggt gag
//
LOCUS       DASQJI010000788         5163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_428668,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000788 DASQJI010000000
VERSION     DASQJI010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428668"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VEV83_20755"
     CDS             <1..522
                     /locus_tag="VEV83_20755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HYK47626.1"
                     /translation="SHPSEAIQYLQRVAGAYGIGRDIHIGDTIIGIKGRVGFVAAAPM
                     IILKSHHALEKHVLTKWQLSWKDTLANFYGNWLHEGQILDPVMRNIEAFFENSQQHVT
                     GKVFVELQPYRFQVNGIESDYDLMNSKFGKYGEMNNGWTGEDVRGFSKIFGNQTAIWN
                     QVHAPDQKTVDAF"
     gene            560..1591
                     /gene="argC"
                     /locus_tag="VEV83_20760"
     CDS             560..1591
                     /gene="argC"
                     /locus_tag="VEV83_20760"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HYK47627.1"
                     /translation="MKIQVGIVGGAGYTGGELIRLLINHPHADIAFVHSKSNAGKYVY
                     DAHKDLIGETELQFTGALDLEKLFSTSFHEGAGAALFLCSGHGESRKFLQQTQIPGDV
                     KIIDLSNDFRLAHSSQLAARSFVYGLPELNTQQIRSAKNIANPGCFATAIQLGLLPLA
                     KAGLLGDVYTTGITGSTGAGQSLTETSHFSWRSNNIQSYKTLSHQHVHEIHQSLHQLQ
                     SSFPLSINGTGPKLSFVPWRGDFTRGIYVSSTVNCDLSADEAKELYTEFYSDHPFTVV
                     SDVMIDMKQAVNTNKCLLHVEKHGNKLVIHSTLDNLLKGASGQAVQNMNLMFGIEETA
                     GLKLKANYF"
     gene            1623..2852
                     /locus_tag="VEV83_20765"
     CDS             1623..2852
                     /locus_tag="VEV83_20765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYK47628.1"
                     /translation="MNNSKYKQSETSRLGDGAVPAKGATLFDVYPLNNITITKAQGSY
                     VWDENGVQYLDMYGGHAVISIGHSHPHWIKRLTDQMEKISFYSNSVHIPLQHELADKL
                     GKLSGKENYQLFLCNSGAEANENALKLASFHNGKKKVVAFTKAFHGRTSLAVAATDNP
                     KIVAPVNETTNIEFLPFNDEDAVKKYFEENGETISAVIVEAIQGVGGINVATETFLQL
                     IRKLCDEHDAIFIADEVQCGYGRSGKFFALDHAGVNADVYTMAKGMGNGFAVGGLLIA
                     PYIKPKHGMLGTTFGGNHLACAAALAVLEVMEHENLIELGKQRGMYLINKLKNIDGIE
                     NVRGKGLMIGFDVPEDLKDLRTKLLNDHFIFTGEAKPNVIRLLPALNITRKQVDEFLD
                     VLQDAIAEIKKPALLEA"
     gene            2990..4018
                     /locus_tag="VEV83_20770"
     CDS             2990..4018
                     /locus_tag="VEV83_20770"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_function: GO:0043857 - N-acetylornithine
                     carbamoyltransferase activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HYK47629.1"
                     /translation="MKQFISVHDVPDINTLVAKALEYKADPFKHKTLGAKKRIGLLFL
                     NPSLRTRLSTQVAAANLGMDAIVFNVDKEGWALEFEEGAIMSGNTAEHIKDAAPVLGR
                     YFDILCIRTFPSLKNRDEDYSELYINQFVKYCGVPVISLESATLHPLQSLTDIVTITE
                     RMQNPKSQIPNPKIVLTWAPHVKPLPQCVANSFSQWVNAWGKAEFVITHPADYELAEQ
                     FTRGATITHNQDEALKDADFVYVKNWSTYNDYGRIYENDPRWMLTEEKLKLTNNAKVM
                     HCLPVRRNVELSDEILDGENSIVTQQAANRVWAAQAVIAHILRGGSMPPSPVRSGTGG
                     PEGENVHP"
     gene            4031..>5163
                     /locus_tag="VEV83_20775"
     CDS             4031..>5163
                     /locus_tag="VEV83_20775"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HYK47630.1"
                     /translation="MKFKFAHFFYYSPLEGKGMNMFYGANHTIFQRAQELRSTMTTAE
                     EILWNVLRINNWKLKFRRQHPVANYVVDFYCHRIRLVIELDGAIHEVEEVKRHDTHRE
                     RHLKEFGLTVLRFKNADVLNDTNGVLRTIEHAIEELSNSPLGDGGKRTASEMDGKKTR
                     LIVIKIGGNVIDDEKKLSLFLDSFSRIDTLKILVHGGGKIATSVGNKLGIESKYINGR
                     RITDDETIDLVTMVYGGLINKKIVAQLQSFGCNAIGLSGADGNLIPATKRGALAGVDY
                     GWAGDVSGSRLLVAGWQVLLQNAFVPVVAPLTHDERGHILNTNADTIASTLAAALSGL
                     YDVRLIYCFEKKGVLENVEDENSVIDSIDKKKYQQLLSEKKLFA"
BASE COUNT         1579 a         1044 c         1230 g         1310 t
ORIGIN      
        1 tcacatccgt ccgaagcgat ccaatattta caacgtgtag ccggggcgta tggtattggc
       61 agagacatcc acatcggcga cacgatcatc ggtattaagg gacgcgttgg ctttgtagct
      121 gccgcgccga tgatcatctt aaaatcccat cacgctttag aaaagcatgt gcttactaaa
      181 tggcaattga gctggaaaga caccctcgcg aatttttatg gcaactggtt gcatgaagga
      241 caaattctcg acccggtgat gagaaacata gaagcatttt ttgagaactc ccaacaacat
      301 gtcacaggaa aagtatttgt ggagttgcag ccgtatcgtt ttcaagtaaa cggtattgaa
      361 agtgattacg acctcatgaa cagcaagttt ggcaaatacg gagagatgaa caatggttgg
      421 actggagagg atgtacgagg attcagcaaa atttttggaa atcaaacagc gatttggaac
      481 caggttcatg ccccggacca aaagacagtt gacgcgtttt gagcattcgc gtctcattat
      541 aataaagcaa ggccttaaga tgaaaataca agttggcata gttggcggcg ctggttacac
      601 tggcggtgaa ttgatcaggt tgttgatcaa tcatccgcac gctgacattg catttgtaca
      661 tagcaaaagc aatgcaggca aatatgtcta tgacgcacac aaggatttaa ttggcgaaac
      721 ggaattacaa tttacaggcg ctcttgatct tgaaaagctg ttttctactt cgtttcatga
      781 aggagccggg gccgctttat ttttatgctc tggtcatgga gaatcaagaa aatttttgca
      841 gcagacgcaa attcccgggg atgttaaaat aattgatctg tccaacgact ttcgcctggc
      901 tcacagctcg cagctcgcag cccgcagctt cgtttatggt cttcctgaat taaacacaca
      961 acaaatcaga tcagcaaaaa acattgcgaa ccccggatgt tttgcaactg ctattcaact
     1021 tggactgctg ccgctggcaa aagctggttt gttaggcgac gtttacacaa ccggcatcac
     1081 cggatcaaca ggcgccggac aatcattgac cgaaacatct cattttagct ggaggtcgaa
     1141 caatatccag tcgtataaaa cattaagcca tcagcatgtg catgagatcc atcaaagttt
     1201 gcatcagttg cagagttctt ttcctctgtc aattaatgga actggaccga agctaagctt
     1261 cgttccctgg cgcggcgatt ttacaagagg gatttatgta agctcgactg tcaattgcga
     1321 cctgtctgct gacgaagcaa aagaacttta cacagaattt tacagcgatc atccttttac
     1381 agttgtatca gatgtaatga tcgacatgaa gcaagcagtg aacacaaaca aatgcctcct
     1441 tcacgtggaa aagcatggca ataaattggt gatccattca actttagata atttattaaa
     1501 gggcgcttca ggccaggcag ttcagaacat gaatttgatg ttcggaattg aggaaacggc
     1561 aggactaaaa ttaaaggcaa actattttta agaacgtaaa cctgaagaaa cgaagactta
     1621 ttatgaacaa ttcaaaatat aagcaaagtg agacctcccg tttaggggac ggagccgtac
     1681 cggccaaggg cgcgacgcta tttgatgtct atcctctcaa caacatcacc atcacaaagg
     1741 cgcaaggctc ttacgtatgg gatgaaaatg gtgtgcagta tctcgacatg tatggcggcc
     1801 acgcggtgat cagcattggc cattcacatc cgcattggat aaaaagactc accgatcaga
     1861 tggagaaaat ttctttttat tcaaactcgg tacacattcc tttgcaacat gagctcgctg
     1921 ataagttagg caaattatcg ggtaaagaaa attaccagct tttcttatgc aacagcggcg
     1981 ctgaggcgaa tgaaaatgcg ttgaagctcg catcatttca caacggtaaa aagaaagtgg
     2041 tggcgtttac aaaggccttt cacggaagaa catcgctcgc ggttgctgca acggacaatc
     2101 caaagattgt ggcacctgtt aacgagacaa caaacattga atttcttccc ttcaatgatg
     2161 aagacgcagt aaaaaaatat tttgaagaga atggagaaac cataagcgca gtcatcgttg
     2221 aagcgataca gggtgtcggc ggaattaatg ttgctacaga aacctttttg caactgataa
     2281 ggaagttgtg tgatgagcac gatgcaattt ttattgccga tgaagtgcag tgtggttatg
     2341 gccgcagcgg aaaatttttc gcgctggatc atgctggtgt gaatgctgac gtctacacga
     2401 tggcaaaagg aatgggtaat ggctttgctg tcggaggact tttgatcgcg ccttacatca
     2461 aaccgaaaca tggaatgctc ggcacaactt tcggcggcaa tcacctcgcc tgtgcggcgg
     2521 cgctggctgt gcttgaagta atggagcacg aaaatttgat cgaacttggc aaacagcgcg
     2581 gcatgtatct tatcaataaa ttaaaaaaca ttgacggcat cgaaaatgtg cgcggcaaag
     2641 gattaatgat cggctttgac gtgccagaag atttaaaaga cctgcgtaca aaactgttga
     2701 atgatcattt catttttaca ggcgaggcaa aacctaatgt gatacgtctt ttgccggcgc
     2761 tgaatattac gagaaagcag gtcgatgagt ttttggatgt gctgcaggac gcaattgctg
     2821 agatcaaaaa accggcgttg cttgaagcat agaatctcga accacattaa ctatgtcgat
     2881 gtcttttaag gtgagtattg ctgagtgaag aacaaggcgc agaagagtgc gacgcaacaa
     2941 cagtatcata cagttccaaa agctaagtac ataaataacg atctatatat tgaaacagtt
     3001 catttccgtt catgatgtgc ctgatataaa tactctcgtt gcaaaggcat tggagtataa
     3061 agcggatcct tttaaacata aaacactcgg cgcaaaaaag cgcatcgggc ttttattttt
     3121 gaacccaagc ctgcgcacaa ggttgagcac acaggttgct gctgccaacc ttggaatgga
     3181 cgcgatcgtt tttaatgttg acaaagaagg ctgggctttg gaatttgaag aaggcgctat
     3241 tatgagcggc aacaccgctg aacacataaa agacgcagcg ccggtcctgg gacgctattt
     3301 tgatattctt tgcataagaa cttttccctc actcaaaaat cgcgatgaag attacagcga
     3361 attatacatt aaccaatttg taaagtattg tggtgttccg gttatcagtt tggaaagtgc
     3421 aacactgcat ccgctgcaat cgctaacgga tattgtcacc ataaccgaac gaatgcaaaa
     3481 tcccaaatcc caaatcccaa atcctaaaat agttttgacc tgggctcccc acgtaaagcc
     3541 attgccacag tgtgtagcca acagtttttc tcaatgggta aacgcatggg gcaaagctga
     3601 gttcgtgatc acgcatcctg cggattatga gctggccgaa caattcacaa gaggcgcaac
     3661 catcacacat aaccaggatg aagctttaaa ggatgcagat tttgtgtatg taaaaaactg
     3721 gagcacctat aacgattatg gccgcatcta tgaaaacgac ccgcgctgga tgcttaccga
     3781 agaaaaattg aaactgacga ataatgcgaa ggtcatgcat tgtttgcccg taagaagaaa
     3841 tgttgaactg agtgatgaaa ttttagacgg cgagaacagt atcgtaacac aacaggcagc
     3901 caacagggtg tgggccgcgc aggccgtgat tgcacacatt ctgaggggcg ggtccatgcc
     3961 cccgtccccc gtccgatccg gcacgggcgg gcctgaaggg gagaatgtac atccgtaaaa
     4021 gttgatacag atgaaattca agtttgctca ttttttttat tattcgcctt tagaaggaaa
     4081 gggcatgaac atgttttatg gagcgaacca tactatattt caacgagcgc aagagttgag
     4141 aagcacaatg actacggctg aagagatttt atggaatgtc ttgcgtataa acaactggaa
     4201 gttgaaattc agacgacagc atcctgttgc caattatgtg gtggattttt attgccaccg
     4261 tattaggctg gtaattgagt tggatggcgc aatacatgaa gttgaggaag taaagcgtca
     4321 tgacacacac agagaacgtc atcttaaaga attcggccta acggttttac gatttaagaa
     4381 tgctgatgtt ttaaatgata cgaacggcgt attacgtaca attgagcatg ctatcgaaga
     4441 actgtcgaac tcccctttag gggacggggg aaaacgcacc gcaagtgaaa tggacgggaa
     4501 aaagacaagg ttaattgtaa taaagattgg tggaaacgta atcgatgatg aaaaaaagct
     4561 ttcattattt ctcgattctt tttcgcgcat tgatacactt aaaattctgg tgcatggagg
     4621 cggaaaaatt gcaacaagtg tcggaaacaa attgggcatc gaatcaaaat atataaatgg
     4681 acgacgaatc acagatgatg agacgatcga tcttgtaacc atggtttatg gcgggctgat
     4741 caataaaaaa atagttgctc aactgcaatc attcggttgt aatgccattg gattaagcgg
     4801 tgcggatgga aatttgattc cggcaacaaa acgcggcgcg ttagccggcg ttgattacgg
     4861 ttgggccgga gatgtttccg gttccaggtt gctggttgcc ggttggcagg tgctgcttca
     4921 aaacgctttt gtaccggtag tggccccgtt aacacacgat gaacgtgggc atatactaaa
     4981 caccaacgcg gacaccattg catcaacact tgcggcggct ttatcaggtt tgtatgatgt
     5041 tcggctgatc tattgctttg aaaaaaaagg cgtgcttgaa aatgtagagg atgagaattc
     5101 tgtcatcgat tcgatcgaca aaaaaaaata tcagcaactc ctttcagaaa aaaaattatt
     5161 tgc
//
LOCUS       DASQJI010000789        12821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_276249,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000789 DASQJI010000000
VERSION     DASQJI010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12821
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276249"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..396)
                     /locus_tag="VEV83_20780"
     CDS             complement(49..396)
                     /locus_tag="VEV83_20780"
                     /inference="COORDINATES: protein motif:HMM:NF039701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6249 domain-containing protein"
                     /protein_id="HYK47631.1"
                     /translation="MDAGIFVAILVPIAAMAMIFGIVYLFKKESLAMIEKGMNPRVHR
                     PAPYTSLKYGLLLTGSGIGLLLAYLIDVASTTIDGDENASIYFALIAVFGGIGLIVSY
                     MIEKKELLDKSLA"
     gene            554..1135
                     /locus_tag="VEV83_20785"
     CDS             554..1135
                     /locus_tag="VEV83_20785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYK47632.1"
                     /translation="MQGGMADKEIISRVLQGDRQFFAELVNRHQHFVFTIALRYARNR
                     QDAEEIAQDVFVKAYRSLADYKQTAKFSTWLYAITANTCSSFLRKKKLETRSLTDQQI
                     FDQANNYHAGSNDIVANTSGANLLNRAMRLLNAEDSTIITLFYKGDQSIEEIGKILGI
                     KPNNAKVKLHRARQRLKEKMELHFGNEVREMCG"
     gene            1191..1709
                     /locus_tag="VEV83_20790"
     CDS             1191..1709
                     /locus_tag="VEV83_20790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47633.1"
                     /translation="MNEQQIEIRLWNYIDGELSAEEKHEIEQKLNNDSKWRQTYDQLL
                     ELNESIHSDLKLEDPPMRFSSNVMEQLSKMQVAPGAKTYINKKIITALASFFVLLIGG
                     LLIYVTTQVNWATATTEKFGFDLRTVDITRHLNSQVINVLLSMLVVLMLMLVERYVST
                     NLAKLKRNQVSR"
     gene            1874..2299
                     /locus_tag="VEV83_20795"
     CDS             1874..2299
                     /locus_tag="VEV83_20795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47634.1"
                     /translation="MQEYRVLRPYGAYLWDRKKWYAQDSTSVDLTSTSFFAQPVTFLA
                     FDPFANSILVEVPSGFYIQPRYEMTFTDNGAGLYTLSGIVLSTDDIDLMAANGVDVID
                     GPNILMADSENQTFEFHHTTRIGSKEPYEYRYIVDKYYR"
     gene            2581..3579
                     /locus_tag="VEV83_20800"
     CDS             2581..3579
                     /locus_tag="VEV83_20800"
                     /inference="COORDINATES: protein motif:HMM:NF040322.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HYK47635.1"
                     /translation="MNTHFLAWWNLENLFDVETSADRIPWLQHELGSYLKGWDETVLN
                     KKVTNLSSIIAQLNGNHGPDIMGFCELENKRVVQLIAGKISVATGRSYDVVHVEMNDH
                     RGIDIAFMYDTSLYTPEPEIFSHEVMKRTGTRDLLQVNFTVNASGKKLFLIGNHWPSR
                     SGGQYESEPFRIMVGENLSYWIKRIMEIRGETEAIIVMGDLNDEPFNRSVSEYALGVA
                     DEHVIENAARPILPDTVHKPYLLNLMHQFLGQNRATFVFGNEKNVLDQFLVSRGLILN
                     AGYFSVQEVNIVDFLPELVTGEYKKPVSFGAPSSAHSYNPEGFSDHLPIYMVIEEK"
     gene            complement(3675..4394)
                     /locus_tag="VEV83_20805"
     CDS             complement(3675..4394)
                     /locus_tag="VEV83_20805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47636.1"
                     /translation="MRKILSILLLIPFIGISQTKTIVSVTRVFPKADKVAEFEKALTA
                     HAQKYHTGDFAWRVYEIQSGPDAGGYHLTEGPTSWDALDGRGDLGAEHTNDWNKNVAI
                     YLTDRSEQSYSEYDDSLSTVALGNYSNKIVINHMYPKPGMIVGATDLVRKLKKVWADG
                     NETVAVYNLVSSGDPQITTVNRLKNGLKELADGYRPPMASRYNAVYGAGAWDTYLADY
                     AKYVERRWSEILVYRSDLSSK"
     gene            4689..5681
                     /locus_tag="VEV83_20810"
     CDS             4689..5681
                     /locus_tag="VEV83_20810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HYK47637.1"
                     /translation="MENNINGHLLPVSSDKQLLDAYSTTVTGVVKHASHAVVHVRVAK
                     KVQHPRTKKIEEQSGSGSGFVISTDGFIVTNNHVIDDAISIKTGFADGIESNATLVGA
                     DPSTDIAVLKVYDGELKPLQFANSDMLEPGQIAIAIGNPMGLQHTVTTGVVSALGRTL
                     RANNGRLIDDVIQTDAALNPGNSGGPLVNSEGKVIGVNTAVISAAQGLCFAVSSNLAA
                     YVVGQLIIHGRVKRAQLGVAAQPVNLTARMIGANQLKTKTGVYVFEILPDGNFYNTQL
                     RLGDIIVEFEGKPVATVDSLHKYLNEDAVGKKISLGVLRGGRKEMLTVIPGEMK"
     gene            complement(5740..6576)
                     /locus_tag="VEV83_20815"
     CDS             complement(5740..6576)
                     /locus_tag="VEV83_20815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK47638.1"
                     /translation="MKTYVHLLVVLTALISAKPFAQTKQLALFNGKDLTGWDTYIGPP
                     LDDSGKKISNIPVGLNNDPNHVFTIINNAGENVIRISGENWGGISTKSEYSNFHLQLM
                     FKWGTLKWGQKKNKKRDSGLLYFCVGPHGADYGAWMRSQEFQIEEGNCGDYWGVAGGT
                     EDIPIIKRSDSEYVYDPSGNLTTFSATSAVGRHCVKRGDAENSSGEWNILDLYCNGDT
                     SVHVINGQVMMVLYHSAQMDSGNVSPLVKGKVQIQSEGAEVFYKRITIEPLKSIPVHL
                     LQ"
     gene            6687..8666
                     /locus_tag="VEV83_20820"
     CDS             6687..8666
                     /locus_tag="VEV83_20820"
                     /inference="COORDINATES: protein motif:HMM:NF025861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HYK47639.1"
                     /translation="MKVLVTATGLLFIAIISVAQKVASYSIASPNGFIQLKVETGPNI
                     SWTASYQSQVIIAPSSIAMRLENGEVLGDHVQIISNKQEKLNHKFPALFYKKDSIEDE
                     YTQLTINCKGDYGIVFRVYNDGVAYRFLTNRKDSLVIKSEDAEFNFPADENAFIPYSN
                     DPHNGDKYECSFENTYRHMKLSEFIKDTVAFAPVLVELPDNKKAVITEADLEDYPGMF
                     LTNGKTGNGLRGDFAPYVLDEKQGGHNKLQAYVTKRADYIAKTQGTRTFPWRIVIISA
                     DDKDLLNNDMVYRLASPARVEDVSWIKPGKVAWDWWNDWNISHVNFKAGINTETYKYY
                     IDFAAANHVEYILLDEGWADSLDIMHIVPEVDLQEIIDYGKQKNVGVWLWGGWLPLDK
                     KIDEALSKYSNMGIKGFKIDFMDRDDQKMVQFYYRMAKKAAQYHLMIDYHGAYKPTGL
                     QRTYPNVVNIEAVHGMEQLKWSNPDMPQFDVTIPFIRMIAGPMDYTPGAMRNANKENF
                     RPIFSMPMSQGTRCHQLAMYVMYEAPFEMLSDNPNIYMREQECTNFIASVPTTFDETV
                     ALSGKVSEYAALARRKGNEWYVGVMSNWTARDISIDLPFLKDGSYVAEIFKDGMNADR
                     DGTDYLKETVTVSSKDKLNIHLAPGGGWVARIYQK"
     gene            8733..9428
                     /gene="trmD"
                     /locus_tag="VEV83_20825"
     CDS             8733..9428
                     /gene="trmD"
                     /locus_tag="VEV83_20825"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HYK47640.1"
                     /translation="MKIDILTVLPELLESPLNHSIMKRAQEKGLLQVRCFNLRKWAIN
                     EYGQVDDYQYGGGAGMVMMCEPLANAIDELKAATSYNEIIYLTPDGDIFDQKSANKLS
                     LQENLLFICGHYKGIDQRIRDQYVTKEISVGNFVLSGGELAAAIVVDAVGRLIPGVLN
                     DETSALFDSFQDDLLAPPVYTRPANFRGWKVPDVLLSGNPKQIEEWRHQQSLAHTQSR
                     RPGLIHDEDDTVY"
     gene            complement(9425..10456)
                     /locus_tag="VEV83_20830"
     CDS             complement(9425..10456)
                     /locus_tag="VEV83_20830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PorP/SprF family type IX secretion system
                     membrane protein"
                     /protein_id="HYK47641.1"
                     /translation="MIKSTRPVFCVALLSLYFLAQNLQAQDLHFSQYFNAPLLTNPAN
                     TGFEPDADWRAGINYRDQWSGVLNNPYKTMSAWGDAQLFNDRFENGWMGIGTVILKDV
                     AGSGNLSSTKIYGSLAYHQLMGYRSLLSGGFGIGAVNKRIDATKLTFDNQWNGKFFDV
                     TIPNGEPFAKTSVWYFDLNAGLNYSIFPSDNVYLNAGVSVDHINMPEESFFSNSASDT
                     KVAPRYNAFLNGSFKVNEQWIVNPNAYFSMMSKATEIVAGMNAHYNLSGDGSLQLIGG
                     LYYRLQDAFIPVIGCTVSGISVTVNYDATNSSLGSYSQTRGAYELSLTKAGVFSVYGK
                     NVKCPSVKF"
     gene            complement(10470..>12821)
                     /locus_tag="VEV83_20835"
     CDS             complement(10470..>12821)
                     /locus_tag="VEV83_20835"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYK47642.1"
                     /translation="RSEVITDDRDNIYLASCTQSSDFPLTPNAFRNSLGGGQDGVFIK
                     ASSDLTNIFNCTYLGGSGDDAAFVLAISRTTGNIYVGGGTTSNDLAFNATDAPQGILH
                     KNFQGGACDGFISEISADGNTLLKTAYVGTGGNDMVYGVQTDKYGIPYVMGTTTSAFP
                     IYKSPFNSGPSPNQANGKQFITKLNADLTQIQYSANFGKGASTPDISPTAFLVDICGN
                     VYVSGWGGSGNDRYYANANVFGMVTTANAISRVTDGNDFYFFVLEKDATSQLFGSFFG
                     TNDPNAYGDHVDGGTSRFDRRGVIYQAVCANCGKVGFFPTTSGSWAPGNPAASGARCN
                     EAAVKIAFELSGVISSIRSSINGVIRDSTGCIPLTVDFADTIALGKKYIWNFGDGSGD
                     TTTIGPNASHTYVAIGDYRVRLISIDSSTCNISDTSYMTIHARANRADIAFTIQKLPP
                     CQSLTYQFNNTSKPPNGFAFAPDDFTWDFGDGTVIVSNAPTLTHTYAGTGTYNVKLYL
                     DDTTFCNSPDSVTVQLRVAAVLVAQFETPPVGCAPYNAFFNNTSLGGQNFVWDFGDGS
                     TSTDPSPTHLYANPGVYTVHLSATDNFTCNPTDDTTMTITVIDGPIASFTYSPTIPKE
                     NTPYDFTNTSIGGTSYKWNFGDGDTLRTTSMAPVSHLFNATGDYTVCLIAFNANGCSD
                     TSCQLVSAIVSPLVDVPNAFSPNNDGVNDIVTVKGYGISSMSWNIYNRWGQLVFRSTS
                     LFNGWDGRFKGQLQAEDVYAYILNVTFTDNTHFTKKGDITLLR"
BASE COUNT         3629 a         2887 c         2887 g         3418 t
ORIGIN      
        1 aaccaataga aatgcaagcc ggcaaataga aattcaagat gcgcggattc aggcaagact
       61 tttatcaagc aattccttct tctcgatcat gtaagaaacg ataagaccga tgcctccgaa
      121 aactgcaatg agtgcaaagt atatcgacgc gttttcatca ccatctatgg tagtggaagc
      181 aacgtcgata aggtaagcga gtaagaggcc aatgccgctg ccggtcaata gcaaaccata
      241 tttaaggctc gtatatggag cgggcctgtg cacacgcgga ttcattcctt tttcgatcat
      301 cgcaaggctc tcttttttaa acaggtatac aattccaaag atcattgcca tagccgcaat
      361 ggggacgagt atagctacaa aaatgccagc atccataaat tttaaatttt tgattattaa
      421 actaaccata tgactacaac cggctgaggc tggttacaaa accaaatgtt ttttttgaac
      481 tttgttgcag gcggtagaaa aactgggtca ggttgtaacc tttgttcgta atgcgtcgtc
      541 ctatttatca tatatgcaag gcggaatggc cgataaagag atcatcagca gggtactgca
      601 gggtgatcgg cagttttttg cagaattggt gaaccgtcac cagcatttcg tatttacaat
      661 cgctctccgg tatgcgcgta accggcaaga cgccgaagaa attgcacagg acgtttttgt
      721 gaaggcatac aggtcgcttg ccgattataa acagacggca aaattcagta cctggttata
      781 cgcaatcact gcaaacacgt gtagcagttt tttgaggaaa aaaaaattag aaacgcgctc
      841 gctaaccgat cagcagatct tcgaccaggc aaataactac catgcaggca gtaatgatat
      901 tgttgcaaac acatcaggag caaacctgtt gaaccgggcg atgcgtttat tgaatgccga
      961 ggattcgacc atcatcactt tattttataa gggcgaccaa agcatcgaag agatcggcaa
     1021 aatattggga ataaagccga acaatgccaa agtgaagttg caccgcgcac ggcaacgatt
     1081 gaaagaaaaa atggagttac acttcggcaa tgaagtaaga gaaatgtgtg gctgaatgtc
     1141 gaagcgcaga tatgcgcaag atgacaaggt gaacattaaa gtcagttact atgaatgaac
     1201 agcagatcga gatccgttta tggaattaca ttgacggtga gctaagcgct gaagaaaagc
     1261 atgagattga gcagaagctt aacaatgatt ctaaatggcg tcagacatac gatcaactat
     1321 tggaacttaa tgaatcaata cattctgacc tgaagctcga ggaccctcca atgcgtttca
     1381 gcagcaacgt tatggaacag ctttcgaaaa tgcaagttgc gccgggtgcg aaaacataca
     1441 tcaacaaaaa gatcataacc gctcttgcat cattttttgt gttgctgatc ggaggactgc
     1501 tcatttatgt aacaacgcag gtgaattggg caaccgccac caccgaaaaa ttcggctttg
     1561 accttcgaac ggttgatatt acaagacatt tgaacagcca ggtcatcaac gtcttacttt
     1621 ccatgctcgt tgttctgatg cttatgcttg tcgaacggta tgtttcaaca aaccttgcta
     1681 aacttaaaag aaatcaggtt agccggtagc aacagccgtc gtaaaaacaa cacacaccat
     1741 tcatccatcc gcgctttcgt gaactgcctg aatcgctgaa aacatttatt tatattacta
     1801 tttgaaatgc gagtgtctaa acttatcctc gtttgtctcg tgctatcgtg ctttggcttc
     1861 acatgccaga aggatgcaag agtacagagt cctgcgccca tatggcgcgt atctttggga
     1921 tcgtaagaag tggtatgccc aggatagtac gtcagtggat ctaaccagca cttctttttt
     1981 tgcgcaaccc gttacatttt tagcattcga tcctttcgct aactcaattc tcgttgaggt
     2041 tcccagcggc ttttatatac aaccccggta tgaaatgaca tttactgaca atggagcggg
     2101 tctgtataca ctttcgggta ttgttctgag tactgatgac atagacttaa tggcggccaa
     2161 cggcgttgac gttatcgatg gaccaaatat tctgatggcc gattctgaaa atcaaacttt
     2221 cgaatttcac cacacaacgc ggattgggtc caaggaacct tatgagtacc ggtacatcgt
     2281 tgataaatat tacaggtagc gaattttttc gaagccattt caaatcgtac ttatccgcca
     2341 ataactccgt caattgcaca cgcaaacaaa tttgcatttt tgatcaggga tgtgtatatt
     2401 tcatatcgaa cgtctttgga atgcagatgc aatagaacta acaacaaaac gaccgttcag
     2461 attattcact aaggaaatca cattcagttc tggtaaagtg ttttaagtcc aagctgcgat
     2521 tttgtaaagc tcgctgttaa aacacgcatc aaccctacta acttcttcaa aaaaaatctt
     2581 atgaacacac attttcttgc ctggtggaat cttgagaacc tcttcgacgt agaaacaagc
     2641 gcggaccgaa ttccatggct gcaacatgaa ttaggatctt acctgaaagg ctgggacgaa
     2701 accgtgctta acaaaaaggt cacaaacctt tcttccatta tagcgcaact taatggcaac
     2761 cacggacctg atatcatggg attctgcgaa cttgagaaca aaagagttgt tcaattgatc
     2821 gccggcaaaa tatctgtggc cacaggccgt agctatgatg tggtacatgt ggaaatgaac
     2881 gaccaccgcg gcattgacat tgccttcatg tacgatactt cgctttacac accggagccg
     2941 gaaatttttt cgcacgaagt gatgaaacgc acaggcaccc gcgatctgtt gcaggtaaat
     3001 tttacagtta acgccagcgg caaaaaatta ttcctgatag gcaaccattg gccttcccgt
     3061 tcaggcggac aatatgagtc tgagccgttc cgtataatgg tcggcgaaaa tctgagctac
     3121 tggatcaagc ggatcatgga gatacgcggc gaaacagaag caatcattgt gatgggagat
     3181 ttgaatgacg agccgtttaa tcgttccgtg tctgaatatg cattaggtgt tgctgatgaa
     3241 cacgtgatcg aaaacgctgc gcgtccaatc ctgcctgaca cggtacataa gccttacctg
     3301 cttaatttga tgcatcagtt tctcggccag aatcgcgcta cgttcgtatt tggcaacgaa
     3361 aaaaatgtac ttgaccaatt ccttgtgtca cgagggctga tcttgaatgc gggctatttt
     3421 agcgtgcagg aggtgaatat tgttgatttc ctgcctgaat tggtgacagg cgaatacaag
     3481 aaacccgtaa gctttggtgc gccttcgagt gcccactctt ataatcctga aggcttcagt
     3541 gatcacctgc ccatatatat ggtaatcgaa gaaaagtaat gcaattcctt cccaaaaaaa
     3601 cttcgaagcg taagaaattg aaaggcccgc cagtttgcac gctgacgggc cttcatgttc
     3661 tattaaacaa tctcctattt agaactcaga tcactccggt agacgaggat ctcgctccat
     3721 ctgcgttcaa catattttgc gtaatcggca agatatgtat cccacgcacc tgcgccgtag
     3781 accgcattat accttgaagc cattggcggc cggtatccgt ctgccagctc ttttaatcca
     3841 ttcttcagcc tgttgactgt tgttatttgc ggatcacctg aactaaccaa gttgtacact
     3901 gcaacggttt cattcccgtc tgcccaaact ttctttaatt ttctaacaag atctgtggcg
     3961 cccactatca tccccggttt tggatacatg tggttaatga cgatcttgtt tgagtaattc
     4021 ccaagcgcaa ccgtgctaag tgagtcgtca tactcggaat atgattgttc tgacctgtct
     4081 gtgagataaa tcgcgacatt tttgttccag tcattggtgt gttcagcgcc aagatcgccg
     4141 cggccatcca aggcatccca actcgtcggc ccttcagtga ggtgatagcc accggcatca
     4201 gggccagact gaatttcgta aaccctccag gcgaaatcac ctgtgtggta cttctgggca
     4261 tgtgcagtca aagccttttc aaattctgca accttgtccg ccttggggaa tactcgtgtt
     4321 acactaacaa tggtttttgt ttggcttatt ccaataaaag gaataagcag aagaatgctt
     4381 aagatttttc tcatttgtgc ttattgtttt gtttaagtaa tggtacttga agatgtacgg
     4441 taatcggggg aagataacct caatatgtga gacagactga tttcttttca aatgtgcaca
     4501 gaattaaaat ttaaaaggtt ccattatatt gatctccgct tcggcaacag ttggctgatg
     4561 aacgcttcaa acacgttgtc atgtgggatt acagctctcc tcccgggcaa atgtttcaat
     4621 cgtacctgat tgtctgacaa aatttctcct gttttcactt ggtttgattg ttgagttttt
     4681 aaacaaacat ggaaaacaat atcaatggac acttattgcc tgtgtcctca gacaagcaat
     4741 tactcgacgc ctattcaaca acggtcaccg gtgttgtaaa acatgcatcg catgcggttg
     4801 tacatgtgcg cgtggcaaaa aaggtgcaac atccgcgcac gaaaaagatc gaagaacaaa
     4861 gtggatcagg atccggattt gtgatatcga cggatggatt tattgtgaca aacaatcatg
     4921 tgatcgatga tgcgatatcg atcaagacgg gttttgccga cggtattgaa tcgaatgcaa
     4981 cgctggttgg cgccgatcct tcaacagaca tcgcagtttt gaaagtttat gacggcgaat
     5041 tgaagccttt gcaatttgca aattctgaca tgcttgaacc tggccaaatt gcaattgcaa
     5101 tcggtaaccc gatgggtttg cagcacacag taaccaccgg tgttgtaagc gcattgggaa
     5161 gaacgttaag agcaaataac ggaaggttga tcgatgatgt gatacaaacc gacgctgctt
     5221 taaatcccgg gaacagcggt ggcccattgg tgaattcgga aggcaaagtg attggtgtaa
     5281 atacagcagt aatttcggca gcgcagggtt tgtgctttgc cgtttcttca aatttggccg
     5341 cttatgttgt gggccaactg atcatacatg ggcgggtgaa gcgcgcgcaa ctgggtgtgg
     5401 ccgcacaacc ggtaaatctc accgcccgga tgatcggggc caaccaactt aaaacaaaaa
     5461 ccggtgtata tgttttcgaa atcttgccgg atggaaactt ttataatact caactaaggc
     5521 tcggtgatat tattgtcgag tttgaaggca agcctgttgc aacagttgac tcacttcata
     5581 aatatctgaa cgaagatgcg gttggaaaaa agatttcact gggtgttttg cgaggaggaa
     5641 gaaaagaaat gctaacggtt atccccgggg agatgaagta actataatta tgtgctgatc
     5701 accgacaatt aatttttctc ctcagcccaa atagaccgat cattgcagca aatgcacagg
     5761 aatagatttc agcggttcga ttgtgatacg cttataaaaa acttcggcac cctctgattg
     5821 tatttgaacc tttcctttta cgagtggcga aacgttcccg ctatccattt gagcagaatg
     5881 ataaagcacc atcattacct gtccatttat tacatgcaca ctggtatcac cattacaata
     5941 taagtcgaga atattccatt cgccggatga attttctgca tcgccacgtt ttacgcaatg
     6001 ccggccaacg gcactcgtag cgctaaacgt tgttaagttc cctgagggat cataaacata
     6061 ttcgctgtct gatcttttta tgatggggat gtcttcggtt cctcctgcca cgccccaata
     6121 atcgccgcag tttccttcct caatttgaaa ttcctgcgag cgcatccacg cgccataatc
     6181 tgcaccatga ggaccgacgc agaaatataa gagtccgctg tcgcgctttt tgtttttctt
     6241 ttgtccccat tttagcgtgc cccatttgaa catcaactgc agatgaaaat ttgaatattc
     6301 acttttagtt gatatgccgc cccagttttc accggaaatg cgaatcacgt tttcgcctgc
     6361 attatttata atagtgaaaa catgattcgg gtcgttattc aatccaacag gaatattgct
     6421 tatttttttc ccggaatcat ccagcggagg accgatgtat gtatcccagc cggttaaatc
     6481 tttgccatta aataaggcca gctgtttggt ttgtgcaaat ggttttgctg aaataagtgc
     6541 ggttaatact accagtaggt gcacgtaagt tttcatgaga tcttgtactt gattgagcaa
     6601 tcgaattcgg tcaattacag ctatcgctga tgttgccagg aatgaatata ccaaatcact
     6661 ttaattttag ccgaaatatt ctcctcatga aagttctggt aaccgcaact ggcttactgt
     6721 ttatcgcgat tatttcggtc gcgcaaaagg tcgcttcgta ttcaattgct tcaccaaatg
     6781 gttttataca acttaaagtt gaaacggggc ctaatatcag ctggaccgca tcgtaccaat
     6841 cgcaggtgat catcgcgcct tcttccatag caatgcgttt ggaaaatggc gaagtgctcg
     6901 gcgatcatgt gcaaatcatt tcaaacaaac aagaaaaact caatcataaa tttccagccc
     6961 tcttttacaa gaaagacagc attgaagacg agtacaccca acttacgatc aactgcaaag
     7021 gtgactatgg tattgtgttt agagtgtaca atgatggcgt cgcttatcgt tttctcacca
     7081 acaggaaaga cagtctcgta ataaaatcag aagatgccga gtttaatttt ccagcggatg
     7141 agaatgcttt tattccttat tcaaatgatc cgcataacgg cgacaaatat gaatgttcat
     7201 ttgagaatac ataccgccat atgaaactgt ctgaatttat aaaagatacg gtcgcgtttg
     7261 cccccgtgct tgttgaactg ccggacaata agaaagcagt catcacggag gcagacctcg
     7321 aagattatcc cggcatgttc ctcacgaatg gaaaaactgg taatggtttg cggggtgatt
     7381 ttgcgcctta cgttttggat gagaaacaag gagggcataa taagctgcag gcatatgtta
     7441 caaagcgcgc agattatatt gccaaaacac agggcacaag aacctttcca tggcgcatag
     7501 ttatcatcag cgcagatgat aaagaccttt tgaataatga tatggtatac cggctcgcat
     7561 cgcccgcacg agtggaagat gtttcctgga tcaaacctgg caaagttgca tgggactggt
     7621 ggaacgactg gaatatttcc cacgtgaatt tcaaagctgg catcaacact gaaacgtaca
     7681 agtattatat tgattttgcc gcggccaacc atgttgaata tattttattg gatgaaggct
     7741 gggctgatag tttggatata atgcacattg tgccggaggt tgatctgcag gagatcatcg
     7801 attacggcaa acaaaaaaat gttggtgtgt ggttgtgggg cggatggctg cccctcgata
     7861 aaaaaatcga tgaggcgttg tcaaaatatt caaacatggg catcaaagga tttaagatcg
     7921 atttcatgga ccgcgatgat caaaagatgg tacagttcta ttatcgcatg gcgaagaaag
     7981 cagcgcaata tcacttgatg atagactatc atggcgcata taagccgacg ggcctccagc
     8041 gtacttatcc aaatgtcgtg aacatcgaag ctgttcacgg catggagcaa ttgaaatgga
     8101 gcaacccgga tatgccgcag tttgatgtaa caattccatt catccggatg atcgcaggcc
     8161 caatggatta tacacccggc gcgatgagaa acgcaaataa agaaaatttc aggccgatat
     8221 tcagcatgcc gatgagccag ggaacgcgtt gtcatcaact cgcaatgtat gttatgtatg
     8281 aagcgccgtt cgaaatgctt tcagacaatc ccaatattta tatgcgcgaa caggaatgca
     8341 caaactttat tgcatctgtt ccaacaacat ttgatgagac ggttgcatta tctggcaaag
     8401 tgagcgaata cgcagcactc gccaggagaa aaggaaacga atggtatgtt ggggtgatga
     8461 gcaactggac tgcgagggat atcagcattg atcttccttt tttgaaagat ggaagttatg
     8521 tagcagagat atttaaagac ggaatgaatg cggatcgtga tgggacagat tatttgaaag
     8581 agaccgtcac ggtttcatcg aaagataagc tgaacattca tctcgcaccg ggtggtggat
     8641 gggttgcgag gatctatcag aaataaaccg gacaccgctt cgcgggtgca attcaatcac
     8701 cgaacaagaa atcaccaaac tatctttgcg tcatgaagat cgatattctg acggttctgc
     8761 ctgaactttt ggaaagcccg ctgaaccaca gcataatgaa acgtgcccag gaaaaaggat
     8821 tgcttcaggt acgttgcttc aacttacgga aatgggcgat caatgaatat gggcaggtgg
     8881 atgattacca gtatggcggc ggcgccggaa tggtgatgat gtgtgaaccg cttgcaaatg
     8941 cgatcgacga actaaaagca gcaacttcct acaatgaaat aatttattta acacctgacg
     9001 gcgacatctt cgatcaaaaa tctgcaaaca aactttcact ccaggaaaat cttcttttta
     9061 tttgcgggca ctataaaggc atagaccagc gcatccgcga tcagtatgtt acaaaagaga
     9121 tctcagtcgg caattttgta ttgagtggcg gagaactggc ggccgcgatt gttgtggatg
     9181 cggttggaag attgatcccc ggcgtattaa acgatgaaac ctctgcgctc ttcgattcat
     9241 tccaggatga tctgttagca ccgcctgtat atacaaggcc tgcaaatttc agaggctgga
     9301 aagttccgga tgttttatta agcggtaatc caaagcagat cgaagaatgg agacaccagc
     9361 aatctcttgc tcatacacaa tcaagaagac ccgggcttat tcacgatgag gatgacaccg
     9421 tatattaaaa tttcacagaa ggacatttca cattcttccc ataaacagag aagacccccg
     9481 ccttcgtcag tgacaactca tacgctccgc gcgtttgact gtatgaaccc aatgaagagt
     9541 ttgttgcgtc gtagttcacg gtaacggaaa tgccactgac cgtgcaaccg ataaccggta
     9601 taaacgcatc ctgcaggcga taatatagtc cgcctatcaa ctgcaaactt ccatcaccgc
     9661 tcagattgta atgtgcattc attccggcaa caatttctgt cgccttactc atcatgctga
     9721 aatacgcatt tggattcacg atccattgtt cgttcacttt aaaactgcca ttgagaaacg
     9781 cattataccg gggtgcaact tttgtatccg atgcactgtt ggaaaaaaaa gattcctccg
     9841 gcatattgat atggtccacg ctcacgccag cgttcaggta aacattgtcc gaagggaaga
     9901 tcgaataatt caagccggca ttcaggtcaa aataccaaac ggaagttttt gcgaagggct
     9961 caccattcgg aattgtaacg tcaaagaact ttccgttcca ttgattatcg aaagtgagtt
    10021 ttgttgcgtc tattctttta tttaccgcac cgattccgaa accgccactc aacaggctcc
    10081 tgtaacccat tagctggtga taagcaaggg agccatatat cttcgtgctg ctgagatttc
    10141 cgcttcctgc aacatccttc aaaataacgg tcccaattcc catccacccg ttttcgaaac
    10201 ggtcattgaa taactgcgca tctccccacg cactcattgt tttgtaagga ttgttcaaga
    10261 caccagacca ttggtcgcga taatttatgc ccgccctcca gtcggcgtcc ggttcaaagc
    10321 cggtatttgc cgggttggtt aacaagggcg cgttgaagta ttgcgaaaag tgcaggtcct
    10381 gcgcctgtaa attttgcgcc aaaaaataca ggcttagcag ggcaacacaa aaaaccggcc
    10441 tcgtactctt aatcataacc acctcctttc tatcttaaca aagtgatatc gcctttcttt
    10501 gtaaaatggg tgttgtctgt gaaagtcaca ttgagtatat acgcataaac atcctccgcc
    10561 tgtaattggc ccttaaaccg gccatcccat ccattaaaca aactggtaga acgaaataca
    10621 agttgtcccc agcgattata aatattccag ctcatgcttg aaattccata tcctttcacg
    10681 gtaacaatat cattcacacc gtcattgttc ggcgagaatg cattcggcac gtcaacaaga
    10741 ggcgatacta ttgcgctcac caactggcaa ctcgtatctg aacatccatt cgcgttgaaa
    10801 gcaatgagac aaacagtata atcacccgtt gcattaaaca agtgactgac gggcgccatg
    10861 cttgtcgtac gcaaggtgtc cccatcacca aagttccact tgtaacttgt tcctccaatc
    10921 gacgtatttg taaaatcata cggcgtgttt tccttaggga tcgtaggcga gtaagtaaac
    10981 gacgcgatag gtccatcaat aacggtgatc gtcattgtag tatcgtctgt cgggttgcag
    11041 gtgaaattat ccgtcgctga taaatgaacc gtgtagacgc ccggattcgc atacaagtgc
    11101 gttggactcg gatccgtcga cgtactgccg tccccgaaat cccagacaaa attttgtccg
    11161 ccaagcgaag tgttattgaa aaatgcatta tacggggcgc agccgacggg cggcgtttca
    11221 aattgcgcta ccagtacagc ggccaccctc aactgaacag tcaccgaatc cggagaatta
    11281 caaaatgtcg tatcgtccaa ataaagtttt acgttatacg tgccggtacc cgcataagta
    11341 tgtgtcaaag tgggtgcatt tgaaacgatg accgtaccat cgccaaagtc ccacgtgaaa
    11401 tcatcaggcg cgaacgcaaa tccgtttggc ggtttcgacg tgttattgaa ttggtatgtg
    11461 agcgattggc aaggaggaag cttttggatc gtgaaggcga tatcagccct attggctctc
    11521 gcatggatcg tcatgtatga agtatctgaa atattacatg tgcttgagtc gatgcttatt
    11581 aatcgcaccc tgtaatcgcc gatggcaaca tacgtgtggc ttgcgttggg cccgatcgtc
    11641 gttgtatcac ccgaaccgtc gccgaaattc caaatgtatt tttttccgag cgctatggtg
    11701 tctgcaaaat caaccgtcag cggaatacaa ccggtactgt cccgtataac tccatttatt
    11761 gacgagcgga tcgaagagat gacgccggat aattcgaaag cgatcttcac ggcagcctca
    11821 ttgcatcttg cccccgacgc ggccgggtta cccggcgccc atgagcccga cgttgttggg
    11881 aagaaaccca ctttgccgca gttcgcacaa acagcctggt agatcactcc tctccggtcg
    11941 aaacgactgg taccaccgtc aacgtggtct ccgtatgcat ttggatcatt agttccgaag
    12001 aagctgccaa acaattgact cgttgcgtcc ttttccaaaa cgaaaaagta aaaatcgttt
    12061 ccgtcggtta cccttgaaat tgcgttagcc gttgtaacca tgccaaacac attcgcattg
    12121 gcatagtacc tgtcgttccc cgaaccaccc caccctgaca cgtaaacatt gccacagata
    12181 tcgacaagaa aagcggttgg tgagatatcg ggcgtgctgg ccccttttcc aaaattcgcc
    12241 gagtattgaa tttgcgtgag atcagcattg agcttcgtta tgaactgctt accatttgcc
    12301 tggttaggac tgggccccga attaaaaggc gatttgtaaa taggaaatgc tgaagtggtg
    12361 gtgcccataa cataaggaat tccgtacttg tcggtctgaa ccccatatac catatcattt
    12421 ccgccggtgc ccacgtacgc ggtcttcaaa agcgtgttcc catcggcaga gatctcggaa
    12481 ataaatccat cgcatgcacc gccctggaaa tttttatgca atatgccctg cggtgcgtcc
    12541 gtagcattga atgcgagatc gttgctggtt gttccacctc caacataaat gttgccagtc
    12601 gttctgctga tcgcaagcac gaaggcggca tcgtcgccgc tgcctccaag atacgtgcag
    12661 ttgaaaatat tggttaggtc ggaactggct ttgatgaaca cgccatcctg gccaccgcca
    12721 aggctgtttc taaatgcgtt cggtgtcagg gggaaatcac tggattgggt acaactggct
    12781 agatagatat tgtcccggtc atcagtgatc acttcgcttc t
//
LOCUS       DASQJI010000790         7777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2425845,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000790 DASQJI010000000
VERSION     DASQJI010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7777
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2425845"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="VEV83_20840"
     CDS             complement(<1..366)
                     /locus_tag="VEV83_20840"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK47643.1"
                     /translation="MKIRWRIIALLFFATTVNYIDRQVMSFVMTDDTFKREMLGISTD
                     TVLTADLIAKFKEHMGLVDAAFKTVYAIGFLVAGWLVDKVGTKKGFSIGIIVWSVAGI
                     LTGFVRSFAQLKMVRALLGL"
     gene            complement(1020..2426)
                     /gene="uxaC"
                     /locus_tag="VEV83_20845"
     CDS             complement(1020..2426)
                     /gene="uxaC"
                     /locus_tag="VEV83_20845"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008880 - glucuronate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HYK47644.1"
                     /translation="MMHPFISENFLLQSDTARRLYFDHVHHLPIIDYHNHLSPEEIAT
                     DKKFESITEAWLKGDHYKWRAMRANGVPEYLITGGGDDISKFKAWAATVPFTMRNPLY
                     HWTHLELKRPFDVLELLNEESAERIYHYCNELLQSKYSVCEILKYHRVELLCTTDSPT
                     DDLQYHQKIASGEQQLRVLPTFRPDPLLDFFNKEQWLNQVDKLSESTQTGIHDLDSFL
                     SGLGNRVEFFHANGCRLADHGLEYMPLHNDKQGKAEKTFAKLFKKKKQPDRDELLALK
                     AHVLFELCKMYHSKQWAQQFHLGAMRNNNTRLFEMIGNDAGTDSIGDFSHARTLSIFL
                     NALDKEHRLAKTILYNLNPADNEVFATLAGNFNDGSSVGKMQWGSAWWFLDQKDGIGK
                     QLNILSNMSLLSRFIGMVTDSRSFLSFSRHDYFRRILCNLVGTDMDNGELPDDLEFTG
                     NMVANISYHNAKNYFGWT"
     gene            complement(2786..3955)
                     /gene="uxuA"
                     /locus_tag="VEV83_20850"
     CDS             complement(2786..3955)
                     /gene="uxuA"
                     /locus_tag="VEV83_20850"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HYK47645.1"
                     /translation="MQLKQTWRWFGPNDPVTLQDVLQTGASGIVNALHQIPHGDVWPV
                     EEIQKRKDIIEAAGLAWSVVESVTVHESIKTQTGNYKQYIELYKQTLRNLAKCDIKIV
                     TYNFMPVTDWTRTNLDYKMPDGSKALYFNWFDLAVFDIYVLKRKNAKNSYTDVILGEA
                     QKRYDQYSQSQVDELTKMILFGLPGEKKITPTEVTEKLDWYKDIDHAALRENLKYFLR
                     EISPVADELGIKLAIHPDDPPFDVLGLPRVVSTASDIDFILSSVPNESNGICFCTGSF
                     GARADNDLPNIVRRIDGRLHFVHLRNTKRDEFGNFYEADHLGGDTDMYGVVKEVLRIQ
                     QQKEHAIPFRPDHGHVMLDDMSKVTNPGYSCIGRMRGLAELRGLMLGISRSEGWE"
     gene            complement(4171..4986)
                     /locus_tag="VEV83_20855"
     CDS             complement(4171..4986)
                     /locus_tag="VEV83_20855"
                     /inference="COORDINATES: protein motif:HMM:NF006132.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47646.1"
                     /translation="MKQLFSLTNKVIIITGATGVLGEAFVHAIAEMGGKVVLVGRNEH
                     VGNARAKELNASGSEAIFLKADVLSKEDLVSARDTILEKWGTIDGLVNAAGGNVPEAV
                     IMPGEEIFDINIEGMRKAFELNLFGSILPVSVFGNALQQSGNASIVNISSMAAQTTLT
                     RILGYSMAKAAIDNYTRWMSVETANRYGGSVRVNAIAPGFFVTHQNRALLINPDGSYT
                     ERGQNVIRNTPFKRFGEPEELCGALIWLLSDASKFVTGEVICIDGGFHINSGV"
     gene            5038..6045
                     /locus_tag="VEV83_20860"
     CDS             5038..6045
                     /locus_tag="VEV83_20860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HYK47647.1"
                     /translation="MVLCFGELLLRLSAAPEGKWLEKNSFGVYVGGAEMNVAHALAHW
                     RVPVCYCTAVPKNFLTRHLVNSIKEKHIDTSTILYKGDKLGFYYLEDGLSVQHAEIIY
                     DRKHSAFADLKKGMFDWDRVLDGIRWFHFSAITPALSKNLVDVCEEALQACERKSIFV
                     SVDLNYRPKLWQYGRKPDEVMPKLMQYCDAAMGNVWSAETMLGVPLRPDLAQVNRKDA
                     YLQQARETSEKITEMFPKCKMVANTFRFGDDQVHYYGTLFSNRTFYASAEYKGHPVID
                     KVGSGDCFMAGLIYGMFNHLPFQQTINFSTAAAFTKLFIKGDCTNKTADDVRSFMMHY
                     E"
     gene            6038..6694
                     /locus_tag="VEV83_20865"
     CDS             6038..6694
                     /locus_tag="VEV83_20865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HYK47648.1"
                     /translation="MNKKYAIQQLICAEKILPLFYHDSADTSVEVLKVLYESGIKAVE
                     YTNRGDNALDNFTAMRKVVDDEMPGMHLGAGTIKTDADAELFVAAGADFIVCPVLNVD
                     VGIIVHKAGLLWIPGCMTSSEIFIAETNGASIVKIFPGNILGPSYIPAIKELFPELMF
                     MPTGGVEVNRENLQSWFKAGVCAVGLGSKLISKPDLDNKNYDKIAALSKEALEIVQGL
                     "
     gene            6771..7703
                     /locus_tag="VEV83_20870"
     CDS             6771..7703
                     /locus_tag="VEV83_20870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HYK47649.1"
                     /translation="MILTITLNPALDKSVSVQKLIPDKKLRCDEIAVEAGGGGINISK
                     AIKRLGGKSVALFPSGGANGKQLEDLLIKEGIDIKVIAIDGETRAGFAVTDLSTDSQY
                     RFVAPGPFMTEDVLETCLKEVENFKPAPDTVIFSGSLPPGLSPNVAAKFAAVCSRIGA
                     RFIADTSGECLKLALNEGIYLLKPNLSELSFLVGKDRLELFEVEDAAKSIIENGNSEV
                     IVVSMGPSGALLLTKDLCKRIPSPNVKKVSTIGAGDSMVAGMALMLSEGKPILEVVQF
                     GVACGTATIMTEGSQLFKKEDVMKLFEWIKLHDA"
BASE COUNT         2112 a         1751 c         1692 g         2222 t
ORIGIN      
        1 aaggccgagc aatgcccgca ccattttcaa ttgcgcaaat gaccgtacaa atcctgtaag
       61 tatgccggcg acgctccaga caataatgcc gatcgaaaat ccctttttcg ttccaacttt
      121 atccacaagc cagcccgcga ccaggaagcc aattgcatat accgttttga aggccgcatc
      181 aacaagaccc atgtgctctt taaattttgc tatcagatcc gcggtgagga cagtgtcagt
      241 tgagatgcca agcatttctc gtttgaacgt atcgtcggtc attacgaaag acatgacttg
      301 tcgatcaatg tagtttactg tcgtcgcaaa aaaaagcagt gcgataatac gccagcgaat
      361 tttcatttgt gaaaaatagt ttttttggtg atgtgaataa taaaagcagg attttacgtc
      421 aggatttatt tttcctctta tgcggaattc gggttcttaa aaatttctca acctctttga
      481 cgtcattccc gcgaagacgg gaacctgctc tctgcattaa aaaactttgt gaaatgattt
      541 cgttccggga gttttttgtt cgaacgacct tgctcttacc ttattaagct ttttggactt
      601 actctacctc tcctgcgtct ttccctcgaa ggcggaaatc tgctcttaaa atagcatcct
      661 ggtttgattc atctggacgc ttgatcacat gatacagaat ttcataattt ccagatgccc
      721 gatcagagac cttctggttt tattgatgag tacgttcggg catgacgccc gttgttgcat
      781 agtgctctta gccgcaaaat ggttataaat tttactcaac ctctcgcgcg tctttcccgt
      841 tccgccgccg cgggaggact gtgctctccg gaattataaa gcctccgctt tacaggacaa
      901 ccgatcggct tacagtctac atcggatctg ttgccttttc ttcttgcaat aaaataatgc
      961 aagaatttga tgtatctctc cagttcattt tccgctgtta acggaagtgt gaacgctaac
     1021 tacgtccacc cgaaataatt ctttgcattg tgatacgaaa tattagctac catattgcct
     1081 gtaaactcaa ggtcatcagg caattcgcca ttgtccatat cagtgccgac gagattgcag
     1141 aggatgcgac ggaaataatc atgacggcta aacgacagga agctgcgtga atcggtgacc
     1201 atcccgataa agcggcttaa caagctcata ttcgacaaaa tattaagctg cttcccgatc
     1261 ccgtctttct gatcgagaaa ccaccatgca cttccccatt gcatcttgcc cactgacgaa
     1321 ccatcattaa aatttccggc gagtgtggca aatacttcat tgtctgctgg gtttagattg
     1381 tataaaattg tttttgcaag acggtgttct ttgtcaagcg cattgaggaa gattgagagt
     1441 gttctcgcgt gcgaaaaatc tccgatcgag tctgtgcccg catcgttgcc aatcatctca
     1501 aataaccgcg tattgttgtt tctcattgcg cctaaatgaa attgctgcgc ccattgtttt
     1561 gaatgataca ttttgcagag ctcaaacaat acatgagctt ttaacgccag caactcgtcc
     1621 cggtctggtt gctttttctt tttaaacaat tttgcgaatg tcttttcggc cttgccttgc
     1681 ttgtcattat gcaacggcat gtactctaag ccgtgatccg ccaaccgaca accgttagca
     1741 tgaaaaaact ctacacggtt gcccagaccg gacagaaaag aatccaggtc atgaatgccg
     1801 gtttgagttg attcagacag cttgtccacc tggttcagcc attgttcctt attaaagaaa
     1861 tcaagcagtg ggtcggggcg aaatgttgga agtactctca gttgctgttc gccggatgcg
     1921 atcttctgat gatattgcag atcgtccgtc gggctatcgg ttgtgcaaag caattctacc
     1981 cggtgatatt tgagaatttc gcatacgctg tatttcgatt gaagcaattc attgcaataa
     2041 tgatagatcc tttcagcgct ttcttcattc agcagttcca aaacatcaaa tggacgtttt
     2101 aattccaggt gcgtccagtg atataatgga tttcgcatgg tgaagggaac ggtcgccgcc
     2161 cacgctttga atttagatat gtcatcgcca ccaccggtaa taagatattc gggaacgcca
     2221 ttagcccgca tcgcgcgcca tttataatgg tcgcctttga gccatgcttc ggtgatcgat
     2281 tcgaattttt tgtcggtcgc aatttcttct ggtgaaagat ggttgtgata atcgatgatc
     2341 ggcaaatggt gcacatgatc aaaatataat cgccttgccg tgtctgattg caacaagaaa
     2401 ttttcagaga taaatgggtg catcatgcaa ttttacaaaa agcggtgaat ctaacgaact
     2461 tccacgagac gtagattcgc gcaaggtgtc atctgccaga ctttcctata aaagataata
     2521 atagcagaac caggccgagg ccaaaagttg catatcttga ccacagtggc gctatttcgc
     2581 taatgaatcc gatcaagcca aggatgatca agatgaaagc tgcatacttt aagagttgtc
     2641 tgttcatttc tgcattttgt tgctcacaat cactccacaa ccaattaccc attttactaa
     2701 taaacaaatt cccacccgct aaaatctgaa atctgcaatc tgcaatcgta aatcgtaaat
     2761 cgtaaatcgt aaattgtaaa tcgtctcatt cccatccttc acttctgcta atgcccaaca
     2821 tcaatccgcg cagttcggcc aatccgcgca ttctccctat gcatgaataa ccaggattcg
     2881 tcactttgct catgtcgtcg agcatcacat gtccatggtc gggccggaat ggaatcgcat
     2941 gttctttctg ctgctggatc ctcaacactt ctttcactac gccgtacatg tcggtatcac
     3001 cgcccagatg atccgcttca taaaaattgc caaactcatc acgcttggta ttgcgcaggt
     3061 gaacaaaatg caagcgtccg tcaatcctgc ggacgatgtt cggtaagtcg ttgtctgctc
     3121 ttgccccgaa tgaaccggtg caaaagcaaa tgccgttgct ttcattaggc acagacgaaa
     3181 gaataaaatc aatatcgctt gcagtggaca caacacgtgg cagtcctaac acatcgaagg
     3241 gagggtcatc cgggtgaatg gcaagtttga tacccagttc atcagcaaca ggcgatatct
     3301 cccgtaaaaa atattttaaa ttttcgcgaa gcgccgcatg gtcaatatct ttataccagt
     3361 caagcttttc agtcacctcc gttggcgtga tctttttttc gcccggcaag ccaaacaaga
     3421 tcatttttgt taattcatct acctgcgatt gagaatattg gtcgtatctt ttttgcgctt
     3481 cgccgagaat cacatcggtg tatgaatttt ttgcattttt tcttttcagc acataaatat
     3541 caaacaccgc caggtcaaac cagttgaaat aaagtgcctt tgatccgtca ggcattttgt
     3601 aatcaagatt cgtacgcgtc cagtcggtca ccggcataaa attgtacgtg acgatcttga
     3661 tgtcgcactt agcgaggttt cgcaaagtct gtttgtacag ttcaatatac tgtttataat
     3721 ttcctgtttg cgttttgatg gactcatgca ccgttacact ttccactaca ctccatgcta
     3781 aacctgctgc ctcgattatg tcctttcgtt tttgaatttc ttccacaggc catacatcac
     3841 catggggaat ctggtgcaat gcatttacga taccagacgc accggtctgc aacacgtcct
     3901 gtaatgtgac cgggtcattc ggcccgaacc atctccatgt ttgtttcagt tgcatgtcct
     3961 aatccctaaa cggaattttt agtttgtaaa aaggcaatgt ttatcgtcat ttcgagtgaa
     4021 acgagaaatc tcaacgcata gccgtccatc atgcgatgct gatctagttc caattagtct
     4081 gaaattttcc gttagcctac ttatccgtct gacggttttt aaaccgtgtg accgtttttc
     4141 ccctggagtg aagcgaaaaa tctaattttt tcacacacca gaattaatat gaaatccgcc
     4201 atcaatacag atcacttcgc cggttacaaa tttagacgca tcactcaata accatattaa
     4261 agcgccgcat aattcttccg gctcgccaaa tctcttgaac ggtgtattcc ttattacatt
     4321 ttgtccgcgt tcagtatagc tgccatctgg gttgatcagc aaagccctgt tttgatgcgt
     4381 gacaaaaaat ccgggcgcga tcgcattcac cctgacggaa cctccgtatc gattagctgt
     4441 ctctacactc atccaccgcg tataattatc gatcgcagct ttcgccattg agtatcctaa
     4501 tatgcgcgtc agcgttgttt gagcagccat cgaagaaata tttacaatac tggcattgcc
     4561 cgattgttgt aatgcgtttc caaaaacgga gacaggaagt atgcttccaa acaaattcaa
     4621 ttcaaaggct tttctcatcc cttctatgtt gatgtcgaat atttcctctc ccggcatgat
     4681 caccgcttcg ggaacattgc cgccggcagc atttacgagc ccatcgatcg ttccccactt
     4741 ttccagaatt gtatctcttg cacttacaag gtcttctttg gacaacacat ccgcttttaa
     4801 aaagatcgct tcgctaccgc ttgcattcaa ttctttcgcc cttgcatttc ctacgtgttc
     4861 attgcgaccg accaaaacaa cttttccacc catttcggca atagcgtgaa caaacgcttc
     4921 ccctaaaacg cctgtggctc ctgttattat tataacttta tttgtaagac tgaataattg
     4981 cttcatgtac gctttcctga tttgatttga tgattaaaat tgcgaaacat ttttcttatg
     5041 gttctatgtt ttggagaatt attgctgaga ttatcggcag ccccggaggg caagtggctt
     5101 gagaaaaact ctttcggtgt ttatgtgggt ggcgcagaaa tgaatgtcgc acatgcgctc
     5161 gctcattgga gagtaccggt ttgttattgc acggcagttc cgaagaattt cctcaccagg
     5221 cacctggtaa acagcatcaa agaaaaacat atagatacgt caacgatact ttacaagggt
     5281 gataagcttg gcttctatta tttagaagat gggttaagcg ttcagcatgc tgaaataatt
     5341 tacgaccgaa aacattccgc ttttgctgac ttgaaaaaag gaatgtttga ttgggatcgc
     5401 gtgctggacg ggatccgatg gtttcatttc agcgcgatca cgccggcgct cagtaaaaat
     5461 cttgttgacg tttgtgaaga ggcactacaa gcctgtgagc ggaaaagtat ttttgtttct
     5521 gtcgacctta actacagacc gaagctctgg caatatggaa ggaaaccgga tgaagtgatg
     5581 ccaaagctga tgcaatattg cgatgccgca atgggcaacg tttggtccgc agaaacaatg
     5641 ttgggcgtac cgctacggcc ggatcttgct caggtcaaca ggaaggacgc gtatttacaa
     5701 caggcgaggg aaacgtccga aaaaataaca gagatgttcc cgaaatgtaa aatggtcgca
     5761 aatacttttc gtttcggtga cgaccaggta cattattatg gaacgctgtt ttcaaaccgt
     5821 acattttacg catcggccga atacaaagga cacccggtga ttgacaaagt aggaagtggt
     5881 gattgtttta tggcaggact gatatacggg atgtttaatc atttgccttt tcagcaaaca
     5941 attaattttt caacggcggc ggcgttcact aaactattca taaagggaga ttgcacgaac
     6001 aaaactgctg atgacgtgag gtcgttcatg atgcactatg aataaaaaat acgcgataca
     6061 acaactcatt tgtgcggaaa agatattgcc tttattttat catgacagcg cagacaccag
     6121 tgtggaagtg ttgaaggttt tgtatgagtc gggaatcaaa gctgttgaat acacaaatcg
     6181 tggcgataat gcgctggata attttacggc gatgcgaaaa gtggtcgacg atgaaatgcc
     6241 cggtatgcac ctcggagctg gcacaatcaa gaccgatgca gatgcggagt tgtttgtcgc
     6301 cgccggtgcc gactttattg tttgcccggt tttaaatgtt gatgtgggaa tcatcgttca
     6361 taaagcaggg ctgttatgga taccgggttg catgacttcc agtgaaatat ttattgcgga
     6421 gaccaacggg gccagtattg tgaagatctt tcccggaaat attttaggac cttcgtacat
     6481 cccggcaatt aaagaattat ttcctgagct catgtttatg ccaaccggtg gcgttgaagt
     6541 aaacagggaa aatttgcaga gctggtttaa agccggcgtt tgtgccgtag gtttgggaag
     6601 taaactcatc agcaaaccag atcttgataa taaaaactac gacaagatcg ctgcgctaag
     6661 caaagaagcg ttggagatcg tgcagggcct ttgaatgaaa tgatataaaa atttcgctga
     6721 tattttcctt cattatttat ttctctcttt ctttgaaaaa aattatataa atgattctca
     6781 ccattacttt aaatccggct ttggataaaa gtgtatccgt tcaaaaattg atccccgata
     6841 aaaagctgcg ctgtgatgaa atagctgtcg aggcaggcgg aggaggaatt aatataagta
     6901 aagccatcaa aaggctaggc ggaaagagcg tagccctttt tccctcgggc ggcgcaaatg
     6961 gaaaacaact ggaagacctg ctgatcaaag aaggaattga tataaaagtg attgcgattg
     7021 acggagaaac gagagctggc tttgccgtaa cggatctttc aacagattcc caatacaggt
     7081 ttgttgcgcc cggccctttt atgacggaag atgtactcga aacttgcctt aaagaggtcg
     7141 aaaacttcaa gcccgcgcct gacaccgtaa ttttcagcgg aagcctgccc ccgggtttgt
     7201 cgccgaatgt ggcagcaaaa tttgcagctg tctgcagccg catcggtgca aggttcattg
     7261 cagatacatc cggcgaatgc cttaagctgg ctttgaacga aggcatttac ctgctgaaac
     7321 caaacttgtc agaattgtcc tttctcgttg gtaaagacag gctggaatta tttgaagttg
     7381 aggacgccgc aaaatcaatt atcgaaaatg gaaacagcga agtgatcgtt gtgtctatgg
     7441 gcccttcagg agcattgctt ctcactaagg atctatgtaa gagaattcct tcaccgaacg
     7501 taaaaaaagt aagcacgatc ggggcggggg acagcatggt agcgggtatg gcgttaatgc
     7561 tttcggaagg caaaccgata cttgaagtgg tgcagtttgg cgtagcctgc ggcactgcga
     7621 cgatcatgac ggaaggaagc cagctattca agaaggaaga cgtgatgaaa ctttttgaat
     7681 ggatcaaact tcatgacgca tagcaggtcc gctaaccaaa aattagtgca atgaatgttg
     7741 ttctttacac tacgcgcctc tacgaaaaag attttct
//
LOCUS       DASQJI010000791         4103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_428994,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000791 DASQJI010000000
VERSION     DASQJI010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4103
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428994"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(524..1288)
                     /locus_tag="VEV83_20875"
     CDS             complement(524..1288)
                     /locus_tag="VEV83_20875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HYK47650.1"
                     /translation="MQSIDRKPFQGVLNVVKFNWQFYVLGFVSVVALTLVRPYVHGYW
                     QNVAVVLSAVVVLAVIVSVLSTFYAYDHSDFYSLNWLPLGIKKDARVINIHAGFDETS
                     EIISKKFGLVDLSVLDFYDQKKHTEISIKRARNQGAVFAGTRTTSTEKIELDANSADY
                     IFLILAAHEIRNEHERIGFFKQLGVALRNNGRIIVAEHLRNTPNFVAYNIGFFHFFSR
                     TAWRRTFALAGISLISELRINPFITAFILEKDGATT"
     gene            complement(1276..2013)
                     /locus_tag="VEV83_20880"
     CDS             complement(1276..2013)
                     /locus_tag="VEV83_20880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HYK47651.1"
                     /translation="MLSFIKNHPFRIKAFFNSSLVITHAVKSEELMNKIPSCVQLDTF
                     KDKWGFIAVAVVQTKHLRPAIFPQSCGMNFLLIGYRMFVTYQTSYGKRLRGLYILRSE
                     TDKTLMQLVGNFFTHYNYSKTDIILTEDVEKISISSNKSEIDITLLKTPDARLPQNSP
                     FESWKEARKFEGPLPFTFYVNQDEREVLIVEGVRQNWTPAPLEIGHCKIGFIEKMNLQ
                     TIVPANAFVIKNISYHWKKGVIDKCSQ"
     gene            complement(2037..2333)
                     /locus_tag="VEV83_20885"
     CDS             complement(2037..2333)
                     /locus_tag="VEV83_20885"
                     /inference="COORDINATES: protein motif:HMM:NF025154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX-like family protein"
                     /protein_id="HYK47652.1"
                     /translation="MCKLLNLVPRHQLIVGRILGHRHAFLFTKIIGALEVLMSAWIVS
                     GIFSPLCAIIQIAVITLMNVIEFVIASDLLLFRKGNIVIAMLLCAVIYINAFIL"
     gene            2271..2453
                     /locus_tag="VEV83_20890"
     CDS             2271..2453
                     /locus_tag="VEV83_20890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47653.1"
                     /translation="MPKYSANNQLVTRDEVKQFTHKTVYEPYEGDEYVCSGMHQQSNK
                     KATRLRMACQGFYRLL"
     gene            complement(2448..3377)
                     /gene="mdh"
                     /locus_tag="VEV83_20895"
     CDS             complement(2448..3377)
                     /gene="mdh"
                     /locus_tag="VEV83_20895"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HYK47654.1"
                     /translation="MKITVVGAGAVGATCADNIVRRELAHEVVLLDIKEGLSEGKAQD
                     MMQTATLLGFDTRITGSTNDYSKTAGSDVVVITSGLPRKPGMTREELIGTNAGIVKGV
                     VENILKHSPDAIIIIISNPMDTMTYLALTSSGLPKNRIIGMGGILDSARFKYQLSNHL
                     GCSPADLNAVVVGGHGDTTMIPLIRLATWNSVPVTNFLSADQQKQIVNDTMVGGATLT
                     KLIGTSAWYAPGAAGAALVEAIVRDEKKLFTCCVSLDGEYGQKDICMGVPVVIGKNGW
                     EKIVEFELNEEEQAAFNKSADAVRNMNDVLKTL"
     gene            3889..>4103
                     /locus_tag="VEV83_20900"
     CDS             3889..>4103
                     /locus_tag="VEV83_20900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018631016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HYK47655.1"
                     /translation="MAKYIFVTGGVTSSLGKGIIAASLAKLLQARGFRVTIQKFDPYI
                     NIDPGTLNPYEHGECYVTEDGAETDLDL"
BASE COUNT         1185 a          910 c          861 g         1147 t
ORIGIN      
        1 ccgttagagg cgtaaactat tgagcaaaca agcgtggcgg tataaaacgc aatgggaaaa
       61 gggacgatca tagggtgaac agggtggccg aataatctta ctttgctctg catgtaagaa
      121 atcggcgtaa aaaatgtgcc attctcaata tgtccagatg ataaaaaaga ttacggagaa
      181 ataagcccac aacaatgaga aaataacgtg gattgttgtt tcaagcttct tgcccttcca
      241 caatttgttt gaataaacaa aaaactggac tactaatcta acggaccaga aaacaaataa
      301 tccgaaggca agcctgtgcc cgagcggagt gtttattatt tcttccgcag aggagataca
      361 caaagcaccg agcaatagta gcataagcgc aataaaaaat gtgtgaacat aaaatatctg
      421 cctgtttatt aagctcaaca ctggcagttc gtccttccat ttaaaccgtt tcggaaagat
      481 aacgtgcaaa caggaaaggg cgattaaaag caatcctgtt atctcaagtt gtagcaccat
      541 ccttctctaa aataaaagct gtaataaatg gattgatcct gagttctgat attaagctta
      601 taccggctaa tgcaaaagta cgtctccagg ctgtccttga aaagaagtga aagaacccga
      661 tgttatatgc aacaaaattc ggcgtattcc ttagatgttc tgcaactata attctcccgt
      721 tgttcctcag agcgacaccc aattgtttaa agaaaccgat tctttcgtgc tcattcctga
      781 tttcatgagc agcgagtatc aaaaaaatat aatctgcgct attcgcatca agttcgattt
      841 tttccgtgct ggttgttctc gttccggcga aaactgcacc ctggttcctg gcacgcttta
      901 ttgaaatttc ggtatgcttt ttctgatcgt aaaagtcaag cactgacaga tcaacgagac
      961 caaatttttt ggaaatgatc tcgctcgttt cgtcaaagcc agcatgaatg tttattacac
     1021 gagcgtcttt ttttattccg agcggtaacc aattgagtga gtaaaaatcg gaatgatcgt
     1081 atgcataaaa tgttgaaagg acagaaacta tgacagcgag cacgacaact gcagaaagca
     1141 ccaccgcgac attttgccaa taaccatgta catatggccg gaccagggtc aaagcaacaa
     1201 ccgacacgaa gccgagcaca taaaattgcc agttgaattt tactacattt aaaacaccct
     1261 gaaatggttt gcgatctatt gactgcattt atctatgacg ccctttttcc agtgataact
     1321 gatgttttta attacgaacg cgtttgcagg tacaatggtc tgtaaattca ttttttctat
     1381 aaatccaatc ttgcagtgtc cgatctcaag cggcgcgggc gtccagtttt gtcgtactcc
     1441 ctccacaatc aaaacctcac gctcgtcctg gttcacataa aatgtaaacg gcaaaggtcc
     1501 ctcaaatttg cgggcttctt tccacgactc aaacggagag ttttggggca agcgcgcatc
     1561 gggtgttttt aaaagcgtta tgtctatttc agatttgttt gaagagatcg aaatcttctc
     1621 aacgtcttcc gttaggatta tgtccgtctt cgaataattg tagtgcgtaa agaaatttcc
     1681 cacaagctgc atcagcgtct tgtctgtctc tgacctcaaa atgtacaatc ctctcaaccg
     1741 tttgccgtaa cttgtttgat aggtgacaaa cattctatag ccgatcaaaa gaaagttcat
     1801 gccgcaagat tgtggaaata tggccggccg caagtgtttt gtttgtacta ctgcaacagc
     1861 gatgaagccc catttatctt taaaggtgtc cagctgaacg cacgatggaa tcttattcat
     1921 caactcttca ctctttaccg catgggttat tacaagggag ctgttgaaaa aggcttttat
     1981 cctgaacgga tgatttttga tgaatgataa caatgacttg ctatttggtg taacatttat
     2041 aaaataaagg catttatgta aataaccgcg caaagcaaca tggcaatcac aatattccct
     2101 ttcctaaata acagcaagtc gctggcgatg acaaattcga taacattcat aagggttatc
     2161 acagcaattt ggatgatggc acataaaggg gagaaaattc cgctaactat ccacgccgac
     2221 atcaaaactt caagcgctcc gataattttt gtaaataaga aagcgtggcg atgcccaagt
     2281 attctgccaa caatcaactg gtgacgaggg acgaggttaa gcagtttaca cacaaaaccg
     2341 tttatgagcc atacgagggc gatgaatatg tttgcagcgg tatgcatcag cagtcaaaca
     2401 aaaaagccac acgattgcgt atggcttgcc agggatttta tcgcttgtta taacgttttc
     2461 agcacatcgt tcatatttct cacggcgtcg gcgcttttgt taaacgcggc ttgctcttct
     2521 tcgttgagct caaattcaac aatcttttcc caaccattct tgccgataac aacgggaaca
     2581 cccatacaaa tatccttttg gccatattcc ccatccaggg acacgcagca ggtaaataat
     2641 tttttctcat ctctaacgat tgcctcaacg agtgcggcgc ctgcggcgcc gggagcatac
     2701 catgcagaag ttccgatcag tttcgtgagc gttgctccac ccaccattgt atcgtttaca
     2761 atttgttttt gctggtcggc gctcaagaag tttgtaaccg gaacactgtt ccaggtggca
     2821 agacgaatca atgggatcat cgttgtgtcg ccgtgcccac ccacgacaac ggcatttagg
     2881 tcggcaggac tgcagccaag atgattgctt aattgatatt tgaaccgggc actgtccaga
     2941 atgccgccca ttccaataat gcggttcttc ggcagcccgc tcgatgttaa tgcgaggtag
     3001 gtcatcgtgt ccatcgggtt gctgatgatg ataatgatcg catccggtga atgttttaat
     3061 atgttttcaa caacgccctt tacaatgccc gcattggtcc caataagttc ttccctcgtc
     3121 attccgggct tgcgcggtaa gccggaagta attacaacca catcacttcc tgcggttttt
     3181 gaataatcat ttgtacttcc cgtgatccgg gtatcgaagc cgagcaacgt tgcggtttgc
     3241 atcatgtcct gggccttccc ttcagaaagt ccttctttga tatcgagcaa tacaacttca
     3301 tgcgccaatt ctctgcgtac aatgttatcg gcgcaggttg ctcccacagc gcccgcacct
     3361 accacagtaa ttttcatgtg taaagttttt tgatttttta atagtcacat ggaattcgcc
     3421 cgctgcacaa gctaatttca tgtgtaaagc ttttgctggt taattctcca ggaaaatcgg
     3481 ttcgctacag cgaaaccgtt cattggatat attcggtgaa aaataatttg agcccgcaaa
     3541 ggtaataaag cacgcctctc attaatcatt tcataaaagg aataaaaaat ttcccacttt
     3601 aagcccacat ttcttttacg gatttcggca agaaaaaaat atcgtttagt tttgcatgac
     3661 cactgagatt tattcttctc gccggtcacc cggaattatc atagacaaga ttggaagccc
     3721 gtcgccaaag gaaagaatgg cattgtgccg ttttcatttg tttttggcaa cgttgtgatt
     3781 tcggagggtc cacagagttt ggttgtgccg ctgttcgggc ggcaattgaa ggtggagata
     3841 aaagcaaggc agctggttca taaaaaattg aaataaaaaa ccattcatat ggctaaatac
     3901 atttttgtta ccggcggtgt aaccagtagt ttaggcaaag gaattattgc cgcatccctt
     3961 gcaaaactgt tgcaggccag gggcttccgg gtgactatcc aaaagtttga tccgtacatc
     4021 aatatcgatc ccggaacatt gaacccttat gaacacggag aatgctatgt tacggaagac
     4081 ggcgcagaaa ccgaccttga cct
//
LOCUS       DASQJI010000792         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2119652,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000792 DASQJI010000000
VERSION     DASQJI010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119652"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VEV83_20905"
     CDS             <1..210
                     /locus_tag="VEV83_20905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HYK47656.1"
                     /translation="NEKDALQIISKRIDAVPGTHRVLYHSPVDDIEIVHTAHNRKGFA
                     EGAVEAARFILGKKGIFSMRDVLGL"
     gene            complement(498..1043)
                     /locus_tag="VEV83_20910"
     CDS             complement(498..1043)
                     /locus_tag="VEV83_20910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47657.1"
                     /translation="MKIKTMIILCTLAAIIFSNQASAQNQFPHVSIFAHALYANALDK
                     SSQKLYNNGFGGVAGVSYGKNNTYFVGSVGYTSFPSAFGPGSLENPNGDETYIPVKVG
                     IRQHLPVLLNFLFIQGNAGVGFISYKSAVDNDTRFAFDVGAGAQFGPFEAALVWDSFT
                     EKQPVGWSSWLTIQAGITIGL"
     gene            1176..>1673
                     /locus_tag="VEV83_20915"
     CDS             1176..>1673
                     /locus_tag="VEV83_20915"
                     /inference="COORDINATES: protein motif:HMM:NF022187.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HYK47658.1"
                     /translation="MKITIVGAGNVGTVLGRRLKEKGHAINEIYSRNHSHAVALSDEL
                     QARVCHDLKQINKQSDLYIVAVSDDALGRISASLQLDKQIILHTSGSISIGYLRNVSE
                     NYGVLYPVQSLRKETHDIPSMPFLVDGNNKDTLQQITNLAISISPQVIVANDETRFHY
                     HLTAVI"
BASE COUNT          522 a          350 c          375 g          426 t
ORIGIN      
        1 aatgaaaaag atgccttgca aataatcagc aaaaggattg atgcggtgcc gggcacgcac
       61 cgggtgcttt accactcgcc ggtcgatgat atcgaaatag tccatacggc gcacaacagg
      121 aagggttttg cggaaggtgc ggtcgaggcc gcaagattta ttctcggtaa aaaaggtatc
      181 ttcagtatgc gcgatgtgct tggcctctga tatgaaaaac ttattgctgt gttcgaatat
      241 aatgtgtcaa acgcaacttg acgaggtgca tttaacgcaa gctgagacgt ggatcatcct
      301 gtgatgaaag aaatgagcaa cagggagatt gctgacgcca tccatcagtc aacgtacggt
      361 tgaaacgcat tcgcaaaata ttttctggga aacaaaatta aatacgggac aggcccttaa
      421 atatgcctgt gagcgtgggc tcaataaaaa atggaaaaca aagaatctga agcgctgaaa
      481 aagagagctt tgcgacctca taaacctatc gtaattcccg cctggatcgt taaccacgag
      541 gaccagccca cgggttgctt ttccgtaaac gaatcccaaa ccagcgctgc ttcaaacgga
      601 ccaaattgtg cgccggcacc tacatcaaat gcaaaccttg tatcgttatc aacggcgctt
      661 ttataactga taaagccgac gcccgcattg ccttgaatga ataggaaatt tagtagaacc
      721 ggaagatgtt gcctgatacc aaccttgacc ggtatatagg tttcgtcacc gttaggattt
      781 tccaaagaac ccggtccaaa tgccgatgga aatgaagtat aaccaaccga accgacaaag
      841 tacgtattgt tctttccata ggaaacgccg gccaccccgc caaaaccatt gttatacaac
      901 ttttgactgc ttttatccag cgcgtttgca tagagcgcgt gtgcgaaaat agaaacgtgt
      961 ggaaactggt tctgtgccga tgcttggttc gaaaatatga ttgcagccag tgtacaaaga
     1021 atgatcatcg tctttatctt catatatggt tttatttaaa aacgtaaatt aaagacgaat
     1081 tcttttacac aacgaaataa ttattcagat ttagcagaca aatcacggag aaatgtgagt
     1141 gtccattatg tggttaaacc agtttacatt taaaaatgaa gatcacaatt gttggggcgg
     1201 gaaacgttgg caccgtattg ggaaggcggt tgaaagaaaa aggtcatgcc atcaacgaga
     1261 tatacagtag aaatcattcc catgctgtgg ccctatctga tgaactgcaa gcgcgggttt
     1321 gccatgatct gaaacagatc aataaacaaa gcgatctata tatcgttgca gtcagcgatg
     1381 acgcacttgg tagaataagt gcttccctgc agttggataa gcaaattatt ttacacacct
     1441 ccggaagtat ttcgatcggc tatttgcgaa atgtttccga aaattacgga gtgctgtatc
     1501 cggtccagtc gttaagaaag gaaacgcacg atattccttc tatgccattt ttggtggatg
     1561 gtaacaacaa agatactttg caacaaatca ctaacctcgc catatcgatt tcaccgcagg
     1621 taattgtcgc gaatgatgaa acacgtttcc attatcattt gacagcagta ata
//
LOCUS       DASQJI010000793         7085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_582508,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000793 DASQJI010000000
VERSION     DASQJI010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7085
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_582508"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1280
                     /locus_tag="VEV83_20920"
     CDS             <1..1280
                     /locus_tag="VEV83_20920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="D-arabinono-1,4-lactone oxidase"
                     /protein_id="HYK47659.1"
                     /translation="ETWAQDDKLKNWAGNLEYSTNKIDYATSVEHVQQLVKKYSKLKV
                     LGTKHCFNTIADTKYNFISLRDMNKVVALDKNAHTVTVEAGMKYGELCPWLNEQGFAL
                     HNLASLPHISVAGAITTATHGSGVKNGNLSTAVDALEIVNANGDVMHLSKKDGEKFYA
                     AVVGLGAIGVITKVTLNIQPAFEMRQYVYEYLPLQNLKEHFDAIVSAGYSVSLFTDWQ
                     NESINEVWIKSRTDDVKNATAMPDFFGAIPATKNLHPIKELDPVNCTDQMGVPGPWYE
                     RMPHFKMGFTPSSGKELQAEYFVPYDHAFEAIMAIQRMGKQISPHLFISEIRTIDADD
                     LWLSPCYKQKSVTIHFTWKQEWDAVSKLLPDIEKELAPFNAKPHWGKLFTMSPAALQS
                     RYKKMPEFKKMVADYDPKQKFRNEFLEKNVFGA"
     gene            complement(1333..3537)
                     /locus_tag="VEV83_20925"
     CDS             complement(1333..3537)
                     /locus_tag="VEV83_20925"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYK47660.1"
                     /translation="MKKRLTYLLFSLIVMKTGVFSQYKEDDYKKKADEIRSSIWAWNF
                     SSFQQRTVPAGYEGNSRVIVARREEVSFIVDPKVKLNLASGPFHGAIYTHTFRELVKI
                     NDAAAREDYSALKFEKFSQYFKNKRSTFLGVRIIKPNGVTEEVNPDEIVLTANEKKYK
                     VGKLAIPGLQIGDMIDYFIETVRSYNTNSYATSDEFVFASDDPLLHYSVHIELGDQMA
                     LEYESINKAPQFNIGNYNGSTTLDVAQDNLPLMPVDLWMSPYRQLPFLRVAMGPRYGA
                     QRVSVHRPGSANSENIPDYILNGWKNTIISYEDAARKSLNSKKGKIKALAESYLAHNG
                     GGDIKSNSLALYYAARHVFYLQPDTKQVSLPDLQSDNSLQQSVWFLSILSVLFDANKF
                     DGQVIILPSRYGPRAGDAMFISDLVPAIVTNDGHIYTAETAFDIPDHLPYDVEGQQAT
                     SLFAVVDLQPTGPGKRNYDLSYSSPDKNVHEEDLTVSFDPAEKGQLKIERRTVLTGDT
                     KLALQKWLLLPEDYYEEERQVMGTPGPFSNELNDAHNDESVAQEYKSLFDQARKEWKD
                     DCTDEIEWQFDTKAGTLSSCNVEQAGIFGSKPNFIYRSAFTVNDWVKSAGDNYILEAG
                     KLVALLKIKSEYRERKEDVYMKYATTFQYNIQIPVPAGFSVEGLDKLNNKLENSTGSF
                     MSTAELQSDTIKIKVVQIFKHNFERIAQWPQLLQIVDAGAAFQDVKVLLRKS"
     gene            complement(3831..5348)
                     /locus_tag="VEV83_20930"
     CDS             complement(3831..5348)
                     /locus_tag="VEV83_20930"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47661.1"
                     /translation="MYIRSVLPIICLCLFSQQLRSQKVDTILTEGSIQYNYVNFEKQI
                     NSYNQSCNIVTSLRLSWNFTLSKWMNFIITTYNYNGENVSTKLDQHWDTVLNAWQNDS
                     VATFNYNTSSQLTSTVRQIWNINAWRNLRRETNTYDAYGRLATMVVELWDTLANGWEN
                     FESDSLKYNADGLLSREFGYSWDTVASAWVTSGRATLTYDADKNLTETLSENWHNGWT
                     NAERYSYTYTTAGKRQTILDQWWYIVGNSGYWQNRWTSYYTYDLNNYLIYYLFQEWSF
                     TFNRWNNVTQLFYSNKPDGKIFQVFDQTWYVDEWLDEARYTYSYTTDCTLPLTLLDLT
                     ATNNNNSVKLNWRTVNEINTAYFTVQRSTNGRTFADIGRVTAIGNSSKLNNYTYLDNT
                     SQLNTNKVYYRLAMVDQDGKSTLSKVVSLEVHGNDFLITPNPAKHYFIIKSSAGGGFR
                     KATLLIADNGGRIVMKKDLNGFDEEKIDVSALARGVYLVYILDADGVRTQKLVVE"
     gene            5611..6378
                     /locus_tag="VEV83_20935"
     CDS             5611..6378
                     /locus_tag="VEV83_20935"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HYK47662.1"
                     /translation="MKHSDELKVEGKVALVTGAARGIGRACALALAEAGADIALGLRN
                     VNAENGLAKEIEAMGKKALPLQLDVSKMNEIKIAIEKIKAHFGRLDILVNNAGIAPEN
                     LIQNVTENDFDDTLAVNLKGTFFVSQAAGELMIQQKFGRIVNLSSQAGFIALPTESVY
                     CMTKAAIAHLTKCFAVEWAKYNINVNAVAPTFIYTPGTEEYLSTECNKEHVLSKIVLG
                     KIGEPKDVANAVLFLSSPAAALITGTTLLVDGGWTAV"
     gene            complement(6531..>7085)
                     /locus_tag="VEV83_20940"
     CDS             complement(6531..>7085)
                     /locus_tag="VEV83_20940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47663.1"
                     /translation="AILLGYCTSASAQAKPSDVASVLFKNVKTKLTIAEQNEIAKKLF
                     ILSSDKDHPFATDKDSKDYPFAALVMPTDMNKDGKEEIFISFGNSYTSGNAESSVSLF
                     IKNATGIYTLNLGFPGTTPDALATSNQGYLDLLVGGPGMEYPVYRWNGKEYAYLRDVK
                     DADYGKLKSTNVAELSKAYQATVQ"
BASE COUNT         2011 a         1521 c         1497 g         2056 t
ORIGIN      
        1 ttgaaacatg ggcgcaggac gacaagctaa agaactgggc cggcaatctc gaatacagca
       61 ccaacaaaat agattacgca acttctgttg agcatgtaca acagctagta aaaaagtaca
      121 gcaaactaaa agtgcttggc acaaagcatt gttttaacac gatcgctgat acgaaataca
      181 attttatttc tctcagagat atgaataaag tggttgccct tgataaaaat gcgcacacag
      241 ttaccgttga agccgggatg aaatatggag agctttgtcc atggctcaac gagcagggct
      301 ttgcgcttca caatcttgct tcgctgcctc atatttcggt tgcaggagcc atcactactg
      361 caacacatgg ctcgggtgta aaaaatggaa atctttcaac tgcggtcgac gcattagaaa
      421 ttgtcaacgc aaacggagac gtgatgcatc tttcaaaaaa agacggagaa aaattttatg
      481 cagcggtggt cggacttgga gcgatcggtg tgatcacaaa agttactttg aacatacaac
      541 ctgcgttcga aatgaggcag tatgtttatg aatatcttcc gctgcaaaac ttaaaggagc
      601 attttgacgc cattgtttct gcaggataca gtgtaagtct ttttaccgac tggcaaaacg
      661 aaagcatcaa tgaagtgtgg ataaaaagca ggaccgatga tgtgaaaaat gctacagcca
      721 tgcctgattt tttcggagca atacctgcga ccaaaaatct tcaccccata aaagaactcg
      781 atccggtaaa ctgtactgat caaatgggag tgcccggtcc atggtacgaa cgcatgcctc
      841 atttcaaaat gggtttcaca ccaagcagtg gcaaagagtt gcaggcagaa tattttgttc
      901 cctacgatca tgcgttcgaa gctataatgg ctattcagcg aatgggaaaa cagattagcc
      961 cgcatctttt catttcggag atccgaacca tcgacgcgga tgacctatgg ctcagcccgt
     1021 gttataaaca aaagtctgta acgattcatt ttacctggaa acaagagtgg gatgctgtaa
     1081 gtaaattgtt gcctgacatc gaaaaagaac ttgctccatt caatgcaaag ccacattggg
     1141 gaaagttgtt tacgatgtct cctgcagcac tgcaatcacg ttacaaaaaa atgccggagt
     1201 ttaaaaagat ggtagcggat tacgacccga aacaaaaatt caggaatgag tttttggaaa
     1261 aaaacgtttt tggagcgtaa tgaccgagtt tcgtttgggt aaagaagcgg cgatattctt
     1321 aaatgaaacc agctatgatt ttcgcaaaag gaccttcacg tcctggaacg cagcgccggc
     1381 atctacgatc tggagcagct gaggccattg cgcgatcctt tcaaaattgt gtttgaaaat
     1441 ttgtacaacc ttaattttaa tcgtgtcgga ttgcagttct gcagtgctca taaaactccc
     1501 tgtagaattt tcaagcttgt tattcagctt atctaaacct tccacagaaa aacctgccgg
     1561 cacagggatc tgaatattgt attgaaaagt tgtagcatat ttcatataga cgtcttcctt
     1621 cctttcacga tactcagatt ttattttaag aagggccacc aatttgcctg cttcgaggat
     1681 gtaattgtca cccgcactct ttacccagtc attcactgta aaagctgatc tataaataaa
     1741 atttggctta ctgccgaaga tcccggcctg ctcaacatta caacttgata atgtcccggc
     1801 ctttgtatca aattgccatt ctatttcatc cgtgcaatca tctttccatt ctttccgcgc
     1861 ttgatcgaaa agactcttgt attcctgggc aacactttcg tcgttgtgcg catcattcag
     1921 ttcattagaa aaaggcccgg gggtgcccat cacttgcctt tcttcttcat aataatcttc
     1981 aggtaaaagc aaccattttt gcagtgcgag ttttgtatcg cctgtcaaaa cggttctgcg
     2041 ttcaattttc aactgccctt tttcagccgg atcaaaagaa acagtgagat cttcttcatg
     2101 gacgttttta tctggcgaag aataactcaa atcataattc cgttttcccg gccctgtcgg
     2161 ttgcaagtct acgacggcaa atagtgacgt ggcttgttgt ccttccacat cataagggag
     2221 gtgatcaggt atatcgaatg cagtctctgc cgtataaata tggccgtcat tcgtaacaat
     2281 tgcgggtacc aggtcagata tgaacatcgc gtcgcccgcc cttggaccgt acctcgatgg
     2341 caatattata acctggccat caaatttatt ggcatcgaat agaacactca ggatcgaaag
     2401 aaaccaaaca ctttgctgca ggctattatc actctgcaga tctggcaggc taacttgttt
     2461 tgtatccggt tgcaaataaa atacgtgcct tgcggcgtaa taaagagcca aagaattact
     2521 ttttatatct ccccctccgt tatgtgccag ataggattct gccaatgctt tgatcttgcc
     2581 tttcttacta ttaaggcttt tcctggcagc atcttcatag cttatgatcg tattcttcca
     2641 accgtttaaa atatagtcag ggatattttc ggaattagcg ctgcccggcc tgtgcacgga
     2701 gacccgttgc gcaccatatc tcggacccat agcaacacgg agaaacggca attgcctgta
     2761 aggcgacatc cacagatcaa ccggcattaa gggcagattg tcttgagcaa cgtcaagagt
     2821 agtgctccca ttgtaattgc caatattaaa ctgcggagcc ttgtttatgc tctcgtattc
     2881 taatgccatt tgatcaccca attcgatgtg cactgaataa tgaagcaggg gatcatccga
     2941 ggcaaataca aattcatcag atgtcgcata gctgttggtg ttgtaagatc ggacggtctc
     3001 gataaagtag tcgatcatgt cgccaatttg taaacctggt atcgccaact tgcctacttt
     3061 atattttttc tcatttgctg ttaacactat ttcgtccgga tttacttctt cggttacacc
     3121 gtttggctta ataatgcgaa caccgagaaa agtggaacgt ttatttttaa aatactggct
     3181 gaatttttca aatttcaatg ctgaataatc ttcccgcgcc gccgcgtcat tgatttttac
     3241 gagttcccga aatgtgtgtg tatagatggc tccatggaat gggcctgaag ccaaattcaa
     3301 ttttaccttt gggtcaacga tgaaacttac ctcttcgcgg cgggcgacga tcacccgtga
     3361 gtttccctcg tagccggcgg gaacagttct ttgttgaaat gaagagaaat tccaggccca
     3421 aatagaactt cgaatttcat cagccttttt tttatagtca tcttctttat actgactgaa
     3481 gactccggtc ttcatgacga tgagtgagaa aagcaaatag gtcaaacgtt ttttcatcgt
     3541 ggctatcgtt taatttctta acccaaatgg gctgaatatg caacgcgctg tcggtttttt
     3601 ttatttcagc agttttatga atgtgtttga tgaaggtaat gtctcaacaa aaaagcgcaa
     3661 acaatggtta cttcggcagc tactgaagcg aaaaattatt tattggctgg ctattccctg
     3721 gcgttgtggt tccggatatc tcgatcagaa tcggtaatta aatataaaac aaaataggga
     3781 ctttcaattt ttaaaaatgt ggaggtaatt ggaaatttaa tttcaaaaac ttactcaacc
     3841 accagctttt gtgttcttac cccgtccgcg tcaaggatgt atactaaata cacacctctt
     3901 gcaagcgcgg atacgtcaat cttttcctca tcaaaaccgt tcagatcttt cttcatcaca
     3961 atcctgcctc cattatccgc tatcaacagc gtggccttgc gaaagccacc gccagcactt
     4021 gattttatta taaagtagtg ctttgcaggg ttgggtgtga tcagaaaatc attgccatga
     4081 acctcgagag aaacgacttt actcaaagta gattttccgt cctggtctac catggcgagg
     4141 cgataataaa ctttgttggt attgagctga ctggtattgt ccaggtaggt atagttatta
     4201 agtttcgaac tatttccgat ggccgttaca cgaccaatat cagcaaaggt tcttccgttg
     4261 gtgctgcgct gaacagtaaa atatgcagtg ttaatctcat tcacggttcg ccaattcaat
     4321 ttcacactgt tgttattgtt ggttgcggtt agatcaagca gcgtaagtgg cagggtgcaa
     4381 tcggttgtat atgagtacgt gtaccgcgcc tcatcaagcc attcatctac ataccaggtc
     4441 tggtcgaata cctggaaaat tttgccgtca ggtttgtttg aatagaataa ttgagtgaca
     4501 ttattccaac ggttgaaagt aaagctccac tcctggaata aataataaat gagataatta
     4561 ttaaggtcgt aggtataata tgaagtccac ctgttttgcc aatacccgct gttacccacg
     4621 atataccacc attgatcgag gatcgtttga cgtttacctg cggtagtata ggtgtagctg
     4681 tatctctccg cgttggtcca tccattgtgc caattttcag ataacgtttc ggttaaattt
     4741 ttatcagcat catatgttaa tgttgccctg ccactggtca cccatgcgga cgccaccgta
     4801 tcccaactgt aaccgaactc tctgcttaac agtccgtcgg cgttatattt taagctgtcc
     4861 gattcgaaat tttcccaacc gttagcaagc gtgtcccata gttcaacgac catcgttgca
     4921 aggcggccat atgcatcata tgtgtttgtc tcacgtcgca aatttcgcca tgcgttgatg
     4981 ttccatattt gccgtacagt tgaagtcagc tgcgaggaag tgttgtaatt aaacgtagct
     5041 accgaatcat tttgccatgc gtttaaaaca gtatcccagt gctgatcgag tttggtagaa
     5101 acattttcgc cattataatt gtaggtcgtt attataaaat tcatccactt cgacaatgta
     5161 aaattccatg aaagtcgtag cgaagtaaca atgttgcatg actggttata actgtttatc
     5221 tgtttttcaa agttgacata attgtactgt atcgatccct cggttaaaat agtgtcaact
     5281 ttttgcgagc gaagctgctg agaaaacaag cagagacaga taatgggcaa aacggatctt
     5341 atatacattt caaggcggtt gcattcttta aaaactgagc ggactatcgg gaaattaaaa
     5401 cagctagtcc gggatttggt tattgcaatg taagctattt tttcatgccc aaacggtttg
     5461 cttcactgca tgtacgccaa cataaaaaac gaagtcttat caaagcctgc agggaacatt
     5521 tcttttaatg tgatgaactg ccaaattttt tacctttcga aggggatcga aacacaaatc
     5581 cggatttatc acaaaaattt tcgcaacaat atgaaacatt cagacgagtt aaaagttgaa
     5641 ggaaaagtgg cgcttgtaac cggtgctgca agagggatcg gccgcgcgtg cgctctcgca
     5701 cttgccgaag caggagcgga tattgcactg ggtttaagaa atgtgaatgc cgagaatggc
     5761 ctcgcaaaag aaattgaagc aatgggaaag aaagcattgc cgttgcaatt ggacgtgagc
     5821 aaaatgaatg aaataaaaat cgcgatagaa aaaatcaaag cgcattttgg acggcttgac
     5881 atccttgtaa ataatgcggg tatcgccccg gaaaacctca ttcaaaatgt aacggaaaac
     5941 gattttgatg atacgcttgc tgtaaatctt aagggaactt tttttgtaag ccaggctgca
     6001 ggtgaactaa tgatacaaca aaaatttggt cgaatcgtca acctgagttc acaggccggg
     6061 ttcattgcgt tgccgacaga atcagtgtat tgcatgacaa aagctgccat cgctcatctt
     6121 acaaaatgtt ttgcagttga atgggcgaaa tacaatatca acgtaaatgc agttgcgcca
     6181 acttttatct acactccggg cacggaggaa tatctttcga ccgaatgcaa taaagaacat
     6241 gtcttatcca agatcgtgct tggtaaaatt ggagaaccaa aggatgtggc gaatgctgtt
     6301 ttatttctat catcaccggc tgctgcactg atcaccggca ctacgttgct cgtagatggc
     6361 ggttggactg cggtgtaaag atttaggaat taggatgtag gatttacgat tttctattgc
     6421 agattggcga ttgcagattg caggcttctg tttacagtgt tcgttctgca aacctcaaac
     6481 ctcaaaactc aaaacctcaa acttcaaact tcaaacctcg aacatcatca ttactgcacc
     6541 gttgcctggt atgctttact caactccgct acgttcgtcg attttagctt accgtaatca
     6601 gcatctttta catctcttaa ataagcatac tctttaccat tccacctgta aacgggatat
     6661 tccatacccg gtccgccaac caaaagatcc aaataaccct ggtttgaggt ggccaacgca
     6721 tccggagtcg tgccaggaaa tccaagattt agtgtatata tcccggtagc atttttaatg
     6781 aacagtgata cactcgactc cgcattcccc gatgtgtaag agttaccgaa ggagatgaat
     6841 atttcttctt tgccgtcctt attcatgtct gtcggcataa caagcgcagc aaacggataa
     6901 tccttgctat ccttgtctgt agcaaatggg tggtccttgt ccgatgataa tatgaagagc
     6961 tttttcgcta tttcattctg ttcggcgatc gtgagttttg tttttacgtt tttgaaaagc
     7021 acggacgcaa cgtcgctggg ttttgcctgc gcggatgctg aagtacaata acctaacaaa
     7081 attgc
//
LOCUS       DASQJI010000794         3385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_430454,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000794 DASQJI010000000
VERSION     DASQJI010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430454"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1243)
                     /locus_tag="VEV83_20945"
     CDS             complement(80..1243)
                     /locus_tag="VEV83_20945"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HYK47664.1"
                     /translation="MPKPVFEIVTHRGKSRIKVMFEPNAKWNARMMHVPGAKWSKTLK
                     CWHIPDTPENRKSCGLPGGEEDPAVGTTNHRVDRRAVLTTVVSQPQPAFPAHRSKRIS
                     PVNDEQRQRFLRQLQLKAYSDSTIRTYRNEFNIFLQTLGKVPAQDLTVERIKDYLVYC
                     QKTLKLSENTIHSRMNALKFYYENVLGREKFFFDIPRPKKPLLLPKILNESELKRMFS
                     AVKNIKHKAILFTAYGAGLRVSEVVRLRIHDIDSKRMEIFVERAKGKKDRVVNLSLLV
                     LDILRQYIQLERPRPVHYLFTGPDGREPYSERSAQKIFQRAKDMAGIKKDVGFHSLRH
                     SFATHLLEKGIDVKYIKELLGHFDIRTTERYLHISNDRLINIVSPLDSLYLDE"
     gene            2031..3152
                     /locus_tag="VEV83_20950"
     CDS             2031..3152
                     /locus_tag="VEV83_20950"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 18 protein"
                     /protein_id="HYK47665.1"
                     /translation="MNNKFYFPFFLIAMLLFLSFSGRKQKPVIIGYVGGFRGLINTDS
                     IDVDRLSHINYAFVDIKDNRAWLHFDSTDTINLKNLSQLKQKKPGLKILISIGGWTWS
                     KNFSDAVLSDTSTKNFANSAVAIVARFDLDGIDIDWEYPGMIGDSNRFRPQDREHYTL
                     LFKDLREGLDSLKKTTHKNYFITTAVGGSHDYIIHTEMDKVQQYTDYINVMSYDYADG
                     SDSISNHHTNLFVSSQDTAQYSADRSIREFIAAGVPEKKIVIGVAFYGKGWQMLSDSN
                     HGLYQRAIAPARGGGFTFLKDSLINKNGFTRYWDTLAAAPYLFNSEKRIFISYDDEES
                     VKRKCEYVKQHHLAGAMFWEYASDKKEYLLKVISEEFGY"
     gene            complement(3182..>3385)
                     /locus_tag="VEV83_20955"
     CDS             complement(3182..>3385)
                     /locus_tag="VEV83_20955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47666.1"
                     /translation="TISKSPSILNEPLLLTVMRVVAMLILRFTIFDLRFFRLQIADCR
                     LQIADCRLQIADCRLQIAAQDTS"
BASE COUNT          914 a          790 c          725 g          956 t
ORIGIN      
        1 tagcatgttt ggaaattaca tagcccgccg cacgcccgcc tgaccggacc ggcaggaatt
       61 ctgccatcgc aaatactttt cattcgtcca ggtataaact gtctaacgga cttacaatat
      121 tgatcagcct gtcattgctt atatgcaaat aacgctcagt tgttcttata tcaaaatgac
      181 ccagcaactc ctttatgtac ttcacatcaa ttcctttctc aagcaaatgc gtagcaaacg
      241 aatgccgcaa gctgtgaaat ccaacatcct tctttatacc agccatgtcc tttgcacgct
      301 gaaatatttt ttgtgcactc cgttcactgt aaggctcacg gccgtcagga ccggtaaata
      361 aataatgcac aggccgcggc ctctcaagct gaatatattg tctcaatatg tcaagcacaa
      421 gtaaactaag atttaccacc cggtccttct tgcccttcgc gcgctccacg aatatttcca
      481 tccgcttgct gtcgatgtcg tggatgcgaa gcctgaccac ctcgctcact ctcaggcctg
      541 ccccatacgc cgtaaacagg atcgctttat gttttatgtt cttgacagcg ctaaacattc
      601 ttttgagctc cgactcattc aggatctttg gaagcaacaa aggctttttc ggcctcggta
      661 tatcaaaaaa gaatttctcc cgtcccaaaa cattttcata ataaaactta agcgcattca
      721 tccgcgaatg gatcgtgttc tcactcagct ttaacgtctt ctgacaataa actaaatagt
      781 ctttaatacg ttccaccgtt aaatcttgtg caggtacttt tccaagcgtt tgcaaaaaaa
      841 tattaaactc gttccggtac gtgcggatcg tggaatcgct gtaagccttt aactgcaatt
      901 gccgcaaaaa tcgctgcctc tgctcatcgt ttaccggaga aatgcgtttt gaacgatgtg
      961 cgggaaatgc tggctgcggc tggctgacga cagttgtgag aacggccctt ctgtcaactc
     1021 tatgattcgt tgttccgaca gcaggatctt cctcgcctcc cggcaatcca cagctttttc
     1081 ggttctccgg cgtgtcaggt atgtgccagc acttgagcgt tttgctccac ttcgctcccg
     1141 gcacgtgcat catgcgcgca ttccattttg catttggctc gaacattacc ttgatgcggc
     1201 tttttccgcg atgagtgaca atttcaaaga caggtttagg catttgggtt cgggttttaa
     1261 tgctccgcca actcactcac acaaaaggca agaggcaggc aaaaattttt attcgtgagg
     1321 acacaaatgt tttcagcaaa aacaccggag gtaacacaag ggctgaactg cagttatgat
     1381 tcggtccggg ttaaggcttc gttgctttgt agcccgctct tcaaaattat atgaaaagcc
     1441 gacttgcgca gaaaaaataa agcgctttcg tatttttttt attatgggcc gaacttcaaa
     1501 tcttcaatga agcgttcgtt gcgtcgcact cttgtacgtt ctgttcatta ttcagcggaa
     1561 taatacacgg attaaacgga cttcgcaccg aatgtcgcgt atttatttca tcgcccgtgt
     1621 tccggctaaa ttgcaatttg ctgtagtacc tcatgaagaa caaattcaag ctaccggtct
     1681 gacgcttttt agaagcgtct gaccgaaacc atcgcgtgtg gttccagtca gacgggttcg
     1741 cgccgtgtac ttgcggtcag acggctccgg gccgtcagac cgataatgct gatatctcca
     1801 tcagttttct tccatcgaag tagtttgcat atttatttac tgtccttcct ataatgaaga
     1861 acagatggaa actaccggtc tgacgctttt ggagcgtctg gccaaaacat ttcgtgtagt
     1921 agcggtcaga cggcttcgcg ccgtcagacc gataatgatc atgtcttcat cagttttttt
     1981 gcttaaagta atttgcacat taatttgctg aacgttcctt acataccagg atgaacaata
     2041 aattttactt cccctttttc ttgatcgcga tgctgctgtt tctgtcattc tccggtcgaa
     2101 aacaaaaacc ggttattatc ggttacgtgg gcggtttcag gggactgata aacacagact
     2161 cgatcgacgt agatcgcctt tcgcatatca attatgcgtt cgtcgacata aaggataacc
     2221 gcgcctggct gcattttgat tcgacggata ctatcaatct gaaaaatctg agccagctca
     2281 aacaaaaaaa acccggcctg aaaattctca tctcaattgg cgggtggacg tggagcaaaa
     2341 atttttccga tgcggtatta agcgatacgt cgacaaaaaa tttcgcgaat agtgcggttg
     2401 ccattgtcgc aagatttgat ttggacggaa tagatatcga ctgggaatat ccaggtatga
     2461 tcggcgatag caataggttt cgcccgcaag acagagaaca ttatactttg ctttttaaag
     2521 atctccgcga aggtttggat agcctgaaaa agacgacaca caaaaactat tttattacaa
     2581 ccgccgttgg cggctcgcat gattatatca ttcacacgga aatggacaag gtgcagcaat
     2641 acacagatta tataaacgtg atgagttacg attatgccga tggcagcgat agcatctcta
     2701 atcatcacac caaccttttt gtgtcatcgc aagacactgc acaatattct gccgacaggt
     2761 cgatacggga gtttattgca gccggcgtgc ctgaaaaaaa gatcgtgatc ggtgttgcgt
     2821 tctatggaaa aggatggcag atgttaagcg attcaaatca tggcttgtat cagcgtgcca
     2881 tcgcacctgc gcgcggtggc gggtttactt tcttaaaaga cagtttgatc aacaaaaatg
     2941 gatttacgcg atactgggat acacttgcgg ccgcgccgta tctctttaac tcagaaaaga
     3001 gaatatttat ttcttatgat gatgaagaat cggtgaagcg aaagtgtgag tacgtaaagc
     3061 agcaccactt ggccggcgcc atgttttggg aatatgccag cgataagaaa gaatacttgt
     3121 tgaaggtcat atcggaggaa tttggatatt gatctctgat gtctgatctc cgatctctga
     3181 tctatgatgt atcttgcgct gcaatctgca atctgcaatc tgcaatctgc aatctgcaat
     3241 ctgcaatctg caatctgcaa tctgcaatct gcaatcgaaa aaatcgtaaa tcaaaaatcg
     3301 taaatcgtaa aatcaacatg gctaccacac gcataacagt caaaagcaac ggctcattaa
     3361 gaatagaagg tgattttgag atcgt
//
LOCUS       DASQJI010000795         4609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_278052,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000795 DASQJI010000000
VERSION     DASQJI010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4609
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278052"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VEV83_20960"
     CDS             complement(<1..977)
                     /locus_tag="VEV83_20960"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HYK47667.1"
                     /translation="MGRKYEIPLGAQHISLLEPLHFKFTTENEKVVDTKANLFYVHRG
                     IEKACCSKFKFRQVSFVVGRVCGLCSVSHTTAYSQVAEKLVKIEVPRRAKYLRMLVIE
                     LDRVHSHLLCLSHVAENSGFEALFMKTMQYREAFMELLEAVCGNRIQYDFSIVGGVSR
                     DLRPTVAEMITERMKTFEPQLDELTEIFQHNWSLSLKNKKAGAISRDDALRLDVVGPF
                     ARAAGVATDVRNETEDLLPWKEAGFEIVTETSGDAYARNMVRLREIGISMQIIQNVVN
                     GLPESALLTETKAFPDGEAVVRLEAPRGELFYYAKGNKTQILERLKIKAP"
     gene            complement(979..1320)
                     /locus_tag="VEV83_20965"
     CDS             complement(979..1320)
                     /locus_tag="VEV83_20965"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HYK47668.1"
                     /translation="MKRIDTTVEKVKDDIQNFYHYELNHFITMNAVDLGGKIEVQWFF
                     CDYLQPNEVVAFCAQITPDVEIPSITDLVPSAWVAESELADLMDLKIENTSKGFVLEP
                     DFERGPLRKKK"
     gene            complement(1325..1843)
                     /gene="nuoB"
                     /locus_tag="VEV83_20970"
     CDS             complement(1325..1843)
                     /gene="nuoB"
                     /locus_tag="VEV83_20970"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HYK47669.1"
                     /translation="MKLNSFRKKSPWILHYNAGSCNGCDIEILACLGPKYDIERFGMI
                     NTGNPKQSDILLVTGPVTKRSRERLVEIYAQMPEPKVVVSCGACACTGGVFRGMYNCE
                     GGVDQYIPVDVYVCGCGTRPEQIIDGVIQAIDILEKKTKDLEESVRLKRPAMKEGAQV
                     NRRNIAAEIETV"
     gene            complement(1840..2685)
                     /locus_tag="VEV83_20975"
     CDS             complement(1840..2685)
                     /locus_tag="VEV83_20975"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HYK47670.1"
                     /translation="MDVFLKILLIALAPVIGGFVYGFERIIKARMQRRIGPPLLQPFY
                     DFLKLADKRKMIVHSTHAFLGIVHFFSLWCALAVLLLGGDFILVIFLHLLSTSLLIVA
                     GYSTRSIFSHLGANRTAISILAYEPVLIMIAVAVFVQTGSFEISAIFRYDQPLLFSMP
                     LAFVALLLILPIKLKKSPFDVAEAHQEVTGGVELEFSGIFYEAVYTAKWLDQIFCYAL
                     VYLFAANDPLLGLALVAITFLYVNALDNSSARVNYKQMLRFSMMIALPVAFINLLLSV
                     LHVLK"
     gene            complement(2698..4563)
                     /locus_tag="VEV83_20980"
     CDS             complement(2698..4563)
                     /locus_tag="VEV83_20980"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HYK47671.1"
                     /translation="MNTLISSLFIIPAVVSGLILILPKLISRIVIISVAFTLSGISIY
                     LFVSIHEPYHLGVPKYFDQIVAVADIILLVFFAWIAVRRKSLLVGAMSVLQLGALLYV
                     TNDHTVESSLQFMVDKLTLFMFLLINIISSIICIFSLKYIDEEDCNNFRKKYFLSILF
                     WFIAVMNVIVCCDNLEYFFLFFELTTLASFLLIGFRKDETSTRNALTALWMNQIGGLA
                     ILAAIFFINYNGYGEGTFSNLLQHASSNTILLPVALLSIAALIKGAQMPFSKWLLGAM
                     VAPTPVSALLHSSTMVKLAPFIILRLSPVLKETSVAWVIVALTGFVFVASAIAALSQD
                     NFKRILAHSTISLLALMIMMAAIGTPATALAAITLILFHGLSKCMLFLDAGIMERVFH
                     VKETSDMDRLGERGPFAAFVITVGFMSLLLPPFGAFIGKWFSIETLGALAVNERVLGA
                     VVIVMIAFGGAVLSLLYFKVLGLSIARAGDKDKVEFETQSAFYFKPILVLLGLIIGGA
                     LTFPFLMMHCFAPVASQALHVPVGITTSGWSLYVGSMVLPVVPLMLAFLLLPATIVLA
                     MFIRFKNVDRAKEYACGEKIDYSFSALYFSTDKATPYFTAIGILFFVALIAVVVL"
BASE COUNT         1389 a         1095 c          919 g         1206 t
ORIGIN      
        1 ggcgctttaa ttttcaggcg ctcgagtatt tgggttttgt tgccttttgc ataataaaat
       61 aattctccgc gcggagcctc aagccgaact accgcttcac cgtcagggaa agcttttgtt
      121 tccgtaagca aggctgactc gggcaatccg ttaacgacat tttgtatgat ctgcatcgag
      181 atcccgatct cgcgcaaacg aaccatgttg cgcgcataag catcaccact tgtttccgtc
      241 acgatttcaa agcctgcctc cttccatggc agcaggtctt cggtttcatt gcgaacgtcg
      301 gtcgctactc cggcagcacg cgcaaacggt cccaccacat cgagtctcag cgcgtcgtcc
      361 cggcttatcg ctccggcctt tttatttttt aatgataagc tccagttgtg ttgaaatatt
      421 tctgtcagtt cgtcaagttg cggttcaaaa gttttcatcc gttccgtgat catctccgct
      481 acggtcggcc tcaaatcgcg tgaaacgcca cctacaattg agaaatcata ttgaattcga
      541 ttgccgcaca ccgcctccaa aagttccatg aaagcttcac ggtactgcat cgtcttcatg
      601 aacaacgctt cgaaaccaga attctcagcc acatggctta agcacaacaa atgagaatgg
      661 accctgtcta attctatcac aagcatccta agatatttcg ctcgtcttgg aacttcgatc
      721 ttcacgagtt tctcggcgac ctgcgaatat gcagtggtat gcgaaacgga gcacagcccg
      781 catacccgtc caaccacaaa acttacctgg cggaatttga attttgagca gcacgctttt
      841 tctattccgc gatgtacata gaacaggttt gcttttgtat cgacgacttt ctcgttctcc
      901 gtcgtaaact taaaatgaag cggctccagc aatgaaatat gctgcgcacc taatggtatt
      961 tcatatttcc tgcccatgct atttcttttt tcttaacgga ccacgttcaa aatcgggttc
     1021 taaaacaaag cctttcgaag tattttcaat tttcagatcc atgaggtcag cgagttcaga
     1081 ttcagcaacc cacgcagacg gtacgaggtc tgttatagat ggtatttcga catccggcgt
     1141 gatctgcgca caaaaagcaa cgacctcgtt tggttgcagg taatcgcaaa agaaccactg
     1201 cacttcgatc ttgccaccca ggtcaacagc attcatcgtg ataaaatgat tcaattcgta
     1261 gtgataaaaa ttttgaatat catctttcac cttttctaca gttgtatcga ttcgtttcat
     1321 tttgtcaaac tgtttcaatt tccgcagcaa tatttctccg gtttacctgc gctccttctt
     1381 tcattgctgg tctcttcaat ctcaccgatt cttcaaggtc ttttgttttc ttttcgagaa
     1441 tgtcaatggc ctgtatcaca ccgtcgataa tttgttccgg cctggtaccg catccgcaca
     1501 catacacatc tacagggatg tattgatcaa cgccgccttc gcagttatac atgccgcgaa
     1561 acacaccgcc cgtacatgca caggcgccac agctcaccac gactttcggc tccggcatct
     1621 gcgcataaat ttcaaccaat ctttcacgcg aacgtttggt cacaggtcct gtcaccagca
     1681 aaatatctga ttgctttggg ttgccggtgt tgatcattcc gaatctttca atatcgtatt
     1741 ttggcccaag gcacgcgagt atctcgatat cgcagccatt gcaacttcct gcattgtagt
     1801 gcagtatcca tggtgatttt tttctaaaag aattcagctt cattttagta catgtaaaac
     1861 agacaacaac aaattaataa aagctaccgg caatgctatc atcattgaaa aacgcagcat
     1921 ttgtttgtaa ttaactctcg ccgatgaatt gtcaagcgcg ttcacataga gaaaagttat
     1981 agccacaagc gctaatccca gcagcgggtc attagctgca aacaaataca cgagcgcata
     2041 gcaaaatatt tgatccagcc attttgcggt atacactgct tcataaaaaa tcccggaaaa
     2101 ttcaagttca actccgcctg ttacctcctg gtgcgcttct gccacatcga acggagattt
     2161 ttttagtttg atcggcagga tcaacagcaa agcgacaaat gctaacggca ttgaaaaaag
     2221 aagcggctga tcgtatctaa aaattgcaga aatttcgaaa ctgcccgtct gcacaaacac
     2281 cgcaacggct atcattatca atacaggctc gtacgcaaga atgctgatcg cggttctgtt
     2341 tgctcccaga tgactgaata tcgagcgggt gctgtatcca gcaacgatca ataacgacgt
     2401 tgatagaagg tgcaggaaga tgacgagtat aaagtcgccg ccgagaagca agacggcgag
     2461 cgcacaccac agagaaaaga aatgtacgat accaagaaag gcgtgcgttg aatgaacgat
     2521 catttttctt ttgtcggcca gttttagaaa atcatagaac ggctgcagta acggagggcc
     2581 gatcctcctt tgcatccgcg ctttaatgat cctttcaaac ccatatacaa acccaccaat
     2641 caccggcgcg agcgcgatca ataatatttt caggaacacg tccatatcaa aatcttgtta
     2701 caataccacc actgcgatca aagccacaaa aaacaaaata ccgatcgcgg tgaagtacgg
     2761 tgtcgctttg tccgttgaaa aatagagtgc ggagaatgaa taatcgatct tttcaccaca
     2821 agcatattcc tttgccctgt ccacattttt aaacctgata aacatcgcga ggacaatggt
     2881 tgcaggaagc aataaaaatg cgagcatcaa aggaacaacc ggtaatacca ttgatccaac
     2941 gtacaaactc catcctgatg tagttatgcc aacaggaaca tgcaaagcct gcgaagcaac
     3001 cggtgcaaaa caatgcatca tcaaaaaagg aaaagttaga gcgcctccaa ttatcaatcc
     3061 cagtaagacc aatattggtt taaaataaaa tgcgctttgc gtttcaaatt caactttgtc
     3121 cttatcaccc gcacgggcaa tcgacaggcc cagtacttta aaatacagga gcgataacac
     3181 tgccccgcca aaggcgatca taacgataac gacagcacct aaaactcttt cattgactgc
     3241 aagagctcct aatgtttcaa tactaaacca ttttccgatg aacgctccga aaggtggaag
     3301 cagcaacgac ataaatccaa ctgtaataac aaatgcagca aacggtcctc tttctccgag
     3361 cctgtccata tcggaagttt cctttacatg gaatactctt tccatgatac cggcatcaag
     3421 aaaaagcatg cattttgaaa gaccatggaa gagaataagt gtaatggccg ccaacgcagt
     3481 tgccggcgtt ccaattgcag ccatcatgat catcagtgca agcaaagaga tcgtggaatg
     3541 ggcgagtatt cgtttgaaat tatcctgcga taaagccgca atagcagatg ccacaaatac
     3601 aaaaccagtt agcgctacga taacccatgc aactgaagtt tcctttaata ccggtgataa
     3661 tcttagtatg atgaaaggag caagtttaac catggtggat gaatgcaata acgcacttac
     3721 gggtgtaggc gccaccattg cgcccaataa ccatttgctg aatggcatct gggcgccttt
     3781 tattaatgcg gctatactta ataaagcaac aggcaacaat attgtgttag aagaagcgtg
     3841 ttgcagtaag ttgctgaatg ttccttctcc gtaaccgtta taattaataa aaaatatggc
     3901 cgcaagaatt gcaagtccgc caatttgatt catccataac gcagttaaag cattcctcgt
     3961 ggaagtttcg tcttttctga aaccgatgag caggaatgag gcaagcgtgg ttaattcaaa
     4021 gaacaggaaa aagtattcca ggttatcgca gcaaacgata acgttcatta cagcgatgaa
     4081 ccaaaacagt attgaaagaa aatatttctt tctgaagttg ttacaatctt cttcgtcgat
     4141 atattttaaa gaaaaaatgc agatgatact gctgatgata tttatcagca ggaacataaa
     4201 aagagtcagc ttgtctacca tgaattgcaa agaactctca acagtatggt cattcgttac
     4261 atacagcaaa gcgcccagtt gcagaacaga catcgctccc accaaaaggc tttttctccg
     4321 aacggcgatc cacgcaaaaa agaccaggag aataatatcg gcaaccgcaa cgatttggtc
     4381 gaaatatttc ggaacaccca aatgatacgg ttcatgaata gaaacgaaca ggtaaatcga
     4441 aattccggat aaagtaaaag caacactgat gataactatt ctcgatatta atttagggag
     4501 gatcaaaatg agaccactga caactgcagg aattatgaat aaactgctaa tgagtgtatt
     4561 catgagattg attttctatt gatgcaatgt agaatgaaaa tgttcggcc
//
LOCUS       DASQJI010000796         5025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1044629,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000796 DASQJI010000000
VERSION     DASQJI010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044629"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VEV83_20985"
     CDS             complement(<1..372)
                     /locus_tag="VEV83_20985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47672.1"
                     /translation="MDLRKKILEEKVYSKEQALAVSEYACSSAERFAKLMQCFLSNEY
                     RLAQRAAWSVSWAAKQKPDLIEPYLKHLIAQLPRKDVHDAVIRNSVRILQQIKIPEAL
                     HGELMNYCFAFIESNSTPVAIK"
     gene            complement(421..1206)
                     /locus_tag="VEV83_20990"
     CDS             complement(421..1206)
                     /locus_tag="VEV83_20990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0055070 - copper ion homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HYK47673.1"
                     /translation="MRLNFCDAFRYSSDSTTTEPAARYLLEIAVFNIRSALIAAAAGA
                     DRIELCENVADGGTTPSYGNLKVAKENISIPVFPIIRPRGGDFFYTDDEFHIMQKDIQ
                     ACKQLGFDGVVIGLLNIDGSIDTNRTKLLVDLAYPMDVTFHRAFDRSKDAFKSLEDII
                     NCGCQRILTSGQVPNAFDGKDLIKKLIEQADERIIIMPGSGVRSNNIKQLAEYTKANE
                     LHSSARNNIPSPMEFRNEGMMEKLENISVDADEVKKMKDALNR"
     gene            complement(1240..2265)
                     /locus_tag="VEV83_20995"
     CDS             complement(1240..2265)
                     /locus_tag="VEV83_20995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HYK47674.1"
                     /translation="MIHRRRLLQLGTLGLSSIVAPKVFASSYKVAGKKPLVISTWDVG
                     VNANKAAWEILRKNGRALDAVEAGVMVTESENTCCVGLDAYPDRDGFVTLDASIMDEH
                     GNAGCVAFLQRIRHPISVARRVMEKTPHVMLVGSGAQQFAVEQGFPLEEEKLSDSAKK
                     AYEKWLQKSEYKPVINIENSKGENSFAPRKLNGGKYNHDTIGMLAIDAQGNLSGSCTT
                     SGMAFKMHGRVGDSPIPGAGLFVDNEVGAAVATGVGEEVIKICGTHMVVEALRHGVQP
                     QAACKLAVEKIMSRNTKEQLKDMQVAFIALDKQGNYGTYAIQKEFNYALCYSDDFNRL
                     IDSEHAL"
     gene            2425..3750
                     /locus_tag="VEV83_21000"
     CDS             2425..3750
                     /locus_tag="VEV83_21000"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYK47675.1"
                     /translation="MKVIIVGGGFAGLKLARRLAKQADIQVLLIDKNNYHQFQPLFYQ
                     VATAGLDASNISFPLRKIFQRTANIHFRLTSLTEIRSAENKIITDIGEFDYDVLVIAT
                     GADTNFFGNEMIRNTSFAMKTTAEALRLRHHIIENFEHALIAKDNDELQRRMTVVVVG
                     GGPTGVELSGAIAEMRKYILPRDYPELDFSMMKIYLVEGSPKTLGVMSKQSSDRSCKY
                     LNKLGVIVKTNSVVKSYDGVTVTLSSGETIGSNTVIWAAGVKGNVPAGLDPSLIVKGN
                     RIKVDRYNKVLGFENIYAIGDIAYMETPKYPHGHPQLANVAINQAKNLAINLRHQVNG
                     NKHLQSQFEYHDKGTMATVGRNLAVVDIPKPDLHFGGWIAWLIWMSLHLMLILGVKNK
                     LQIFINWLYKYFTYDQNLRLLIRGSYRPDAPPQSTPETNAAKPAAVANT"
     gene            3829..>5025
                     /locus_tag="VEV83_21005"
     CDS             3829..>5025
                     /locus_tag="VEV83_21005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HYK47676.1"
                     /translation="MNQEQIRLTKRSWKKWGPYVSDRQWGTVREDYSANGDAWNYTTH
                     DMARSRAYRWGEEGIGGICDKNQLLCFSIALWNKKDPILKEILFGLSNGQGNHGEDVK
                     ELYYYLDGTPTHSYMKMLYKYPQNEFPYKALADENEKRGKFDPEFELIDTGIFNNNEY
                     FDVFIEYAKASETDILIRITLYNRGEKDASLNILPTIWFRNTWAWGYDDYKPSLVSSN
                     GNNITISHKKLGDYTLYKRQQGEVLFCDNETNAERLFQISNNSSYAKDGINEYVVHQK
                     KEAVNNAGGTKAAINFDTIVKAQQSVTYDLRLSSTLHCNPFQDFENIFSLRISEANEF
                     YDNVQKAITDNDAKLVQRQAFAGMLWNKQFYYYDIPQWLDGDPAQPPPPQERTDGRNH
                     NWLHLNN"
BASE COUNT         1440 a         1139 c         1107 g         1339 t
ORIGIN      
        1 ttttatcgcg acaggagtgg agtttgactc aataaatgca aagcaataat tcatgagttc
       61 gccgtgcagc gcttcgggta ttttaatttg ctgaaggatg cgaacgctgt ttcgtatcac
      121 cgcatcatgc acatctttcc gcggcaattg tgcgatgaga tgtttgagat atggttcaat
      181 aagatccggt ttttgcttcg ctgcccagct aacgctccat gccgcgcgct gcgcgagcct
      241 gtattcgttt gaaagaaaac attgcatcaa ctttgcaaat cgttcagccg atgaacacgc
      301 atattcagaa acggccaacg cctgttcttt tgaataaact ttttcttcga gtattttttt
      361 acgcaagtcc acgtacaagg ttaaaagcaa aagttaggcc ctaagttgta aaagttgagg
      421 tcaacgattt aaagcgtctt tcattttctt tacttcatca gcatcaacgg aaatattttc
      481 caatttttcc atcatgcctt cattacgaaa ttccattgga gacggaatat tgtttctcgc
      541 agatgagtgc aattcgtttg ctttggtgta ttccgccagt tgtttaatgt tattgcttcg
      601 aacgccactt cccggcatga tgatgatcct ttcatccgcc tgttcaatta attttttgat
      661 caaatccttt ccgtcaaatg cattcggaac ctggccactg gtaagaatac gctggcaacc
      721 gcaattgatt atatcttcaa gtgacttaaa cgcatctttc gacctgtcaa acgcccgatg
      781 aaatgtaacg tccatcggat aagcgaggtc aaccagcagc ttcgttctat ttgtatcgat
      841 tgaaccgtcg atatttaata aaccaatcac aacaccatca aatcctaatt gtttgcaagc
      901 ctgaatgtct ttttgcatga tgtgaaactc atcgtctgtg taaaagaagt cgccaccgcg
      961 cggacggatg attgggaata caggaatcga aatgttttct tttgcgactt tgagatttcc
     1021 ataggacgga gttgtgcctc catccgcaac gttttcgcaa agttcaattc tatctgcgcc
     1081 tgcggccgct gcaattaaag cagatcgaat attgaagaca gctatttcaa gtaggtacct
     1141 ggcagccggc tcagtcgtcg ttgagtccga agagtaacga aacgcatcac aaaaatttaa
     1201 tctcataatt tttaggtcag tgctgcgaag tcacttcctt tataatgcat gttctgaatc
     1261 gatcaacctg ttgaagtcat ctgaataaca caatgcgtaa ttgaattctt tttgaattgc
     1321 atatgtgcca taatttccct gtttgtcgag cgcgatgaac gcaacctgca tgtctttcag
     1381 ttgttctttt gtgttgcggc tcatgatctt ttcgacagca agtttacatg cagcttgcgg
     1441 ttgtacgcca tgtcgcaagg cttcaacaac catatgcgta ccgcagatct ttatcacttc
     1501 ttcgcccaca ccggtagcaa cggctgcacc aacttcatta tcgacaaata aacccgcgcc
     1561 cggaatcggg gagtcgccaa cacgtccgtg cattttaaaa gccatcccgc tcgttgtgca
     1621 gctaccgctt aaatttccct gtgcatcgat ggcaagcatt ccaatggtgt cgtggttgta
     1681 ttttccgccg tttaacttcc ttggagcaaa tgaattttct ccctttgagt tttctatgtt
     1741 tatcacaggt ttgtactccg atttttgcag ccacttttca taagccttct tagcactatc
     1801 gctcaacttt tcttcttcca acggaaaacc ctgctcaacc gcaaattgtt gagcgccgct
     1861 gccaacgagc atcacgtgtg gcgttttttc catcacacgc cttgcgacgg agatcgggtg
     1921 ccgtatcctt tgcaaaaaag cgacacagcc tgcattacca tgttcgtcca tgatagaagc
     1981 gtcgagtgta acaaacccgt cgcggtcggg atatgcatct aagccaacgc aacatgtgtt
     2041 ctctgattcg gtaaccataa caccggcctc cacggcatcc aaagcgcggc cattttttcg
     2101 caagatctcc catgccgctt tattcgcatt cacaccaaca tcccatgtgg aaatgaccag
     2161 cggttttttg ccggcaactt tataagaaga tgcaaaaact ttgggcgcga cgatcgagct
     2221 caatcccagg gtgcctaatt gtagcaaccg acggcgatgg atcattatgg tatatttgat
     2281 ggtgaagaac tatcaaagaa aaatttactc aaatatacaa gcacgaaatt tggggatgaa
     2341 ataaacgtca acaacgcatg caggattgtc ttcttagccg acgaaggcgt tttaatttca
     2401 ggcatgctct aaaaaatatt tcccatgaaa gtgatcatcg tcggaggcgg atttgcaggt
     2461 ttgaaactgg cgaggagact cgcaaagcaa gccgacatac aggtgttgct gattgacaag
     2521 aataattatc accagtttca accgttgttt taccaggttg caaccgctgg tcttgatgcg
     2581 agcaatattt ctttcccgct tcgaaaaatc ttccaaagaa ctgcgaacat tcattttagg
     2641 ttaacatcgt tgaccgagat aagatcggct gaaaataaga tcataactga tattggcgaa
     2701 tttgattatg atgtgctcgt tatagcgacc ggcgccgaca cgaatttctt tggcaacgaa
     2761 atgatcagga atacctcttt cgcgatgaag acaaccgcag aagcattgcg gcttcgccat
     2821 catatcattg aaaatttcga acatgcattg atagcgaaag acaatgacga attgcaaaga
     2881 cggatgacgg ttgtggtggt cggcggcggg ccgacggggg ttgaactaag cggtgccatt
     2941 gccgaaatgc gcaaatacat tttaccaaga gattacccgg agctcgactt ctcgatgatg
     3001 aaaatttacc tcgttgaagg tagcccaaaa acattgggcg tgatgagcaa gcaaagcagc
     3061 gaccggagct gtaaatattt gaataaactg ggtgtcatcg tgaaaacaaa ttctgtcgtg
     3121 aaaagctacg acggtgtcac cgtgacatta tcaagcggcg aaaccatcgg cagcaacaca
     3181 gtgatctggg cagccggggt aaaaggaaat gttccggccg gccttgatcc ttcgttgatc
     3241 gtgaaaggca accgaatcaa agtagaccga tacaacaaag tattaggctt tgaaaatatt
     3301 tacgcgatcg gtgacattgc ctacatggaa acgccaaaat atccgcacgg tcacccgcaa
     3361 ttggcgaacg ttgctatcaa ccaggcaaaa aatcttgcga taaatctgag acaccaggtg
     3421 aatggaaata aacacctgca gtctcagttt gagtatcacg ataaaggcac gatggcaact
     3481 gtcggaagaa atcttgctgt cgtcgatata ccaaaaccgg acctgcattt cggcggatgg
     3541 atcgcctggt taatatggat gagcctgcac cttatgctga tacttggcgt gaaaaataaa
     3601 cttcaaattt ttatcaactg gttgtataaa tactttacct acgatcagaa cttacgtctt
     3661 ttgataagag ggagctaccg gccagacgcg ccgccgcaat cgacgccgga gacaaatgcc
     3721 gcaaagcctg ctgccgtggc gaatacttaa gcgcgatctc ttgcagattg cgtttatctt
     3781 tatttttctt tcttaaaata cgtaaatcac tcgcctgccg cagaaagcat gaatcaggaa
     3841 caaattcgcc tcacaaaaag atcgtggaag aaatggggtc cttatgttag cgacaggcaa
     3901 tggggcactg ttcgcgaaga ctacagcgcg aatggtgacg catggaatta cacaacgcac
     3961 gacatggcgc gcagcagggc atatcgctgg ggcgaagaag gcatcggcgg gatctgcgac
     4021 aaaaatcagc tcctgtgttt ttccattgcg ctttggaata aaaaggaccc gatcctgaaa
     4081 gagatcctat ttggcctgag caacggccag ggcaatcacg gtgaagatgt aaaagagttg
     4141 tattactatc ttgatggaac gcctacgcat tcttacatga agatgctcta caagtatccg
     4201 cagaacgagt ttccatacaa agcactggca gatgaaaatg aaaaacgcgg caagttcgat
     4261 ccggagttcg aattgatcga tacaggcata tttaacaaca atgaatattt tgatgtgttc
     4321 attgaatatg cgaaagcatc tgaaaccgat atactgatac gcattaccct ctataaccgc
     4381 ggagaaaaag acgcatcatt aaatatttta ccaacgattt ggtttcgcaa cacctgggcc
     4441 tggggatacg atgattataa accatcactg gtttcttcaa atggaaataa cattacgatc
     4501 agccacaaaa aactgggtga ttatacactg tacaaacgac aacaaggcga ggttttattt
     4561 tgcgacaacg aaacgaatgc cgaacgtctt tttcagatat caaacaattc atcgtatgca
     4621 aaggatggta tcaacgagta tgttgtccat caaaagaaag aagccgttaa taatgcgggc
     4681 ggaacaaaag cagcaatcaa ttttgatacg attgtgaagg ctcagcaaag tgtaacatac
     4741 gatctgcgct tatcatcaac tttacattgc aacccgtttc aggatttcga aaatatcttt
     4801 tcgttgcgca tcagtgaggc aaatgaattt tatgataatg tccagaaagc aattaccgac
     4861 aacgacgcaa aactcgtgca acgccaggct tttgcaggga tgttatggaa caaacagttt
     4921 tactattacg atattcctca gtggctcgac ggagatccgg cgcagccgcc gcctccgcag
     4981 gaaagaacgg atggacgcaa tcacaattgg ctccatctga acaat
//
LOCUS       DASQJI010000797         7736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_278438,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000797 DASQJI010000000
VERSION     DASQJI010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7736
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278438"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VEV83_21010"
     CDS             <1..498
                     /locus_tag="VEV83_21010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HYK47677.1"
                     /translation="KTYSRDDFHAHPQEYECLFLPFALETDVLMNGVYWDIHVPRLFE
                     MDDLKRSDFRIKTIADITDDTYGSVPCNMGDGTIDDPVYGVERATGKKTAPYLDGSID
                     LMAVGNLPNELPRDASRFFGEQLIKHVLTDLVTGGSAVIERATILKQGQLTPHFEYLE
                     DYAGH"
     gene            895..1740
                     /locus_tag="VEV83_21015"
     CDS             895..1740
                     /locus_tag="VEV83_21015"
                     /inference="COORDINATES: protein motif:HMM:NF018659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdiA-regulated domain-containing protein"
                     /protein_id="HYK47678.1"
                     /translation="MKSLKSFLNVIVVTTFILSCNNRPNYPTPPGYDLNHPTTVRLPT
                     QLDEISGIIYYPKDTGVFAISDATGSLYKIFPDRNTTVQKWKFGDNEDYEDVQLVDSV
                     FYVLSSKGNLVSIRFSGHDSLQTSSFKFPDKKNEFESLYYDSSLRKLVLICKDCHDDK
                     KNSVSSWSFDIDHQAFDKGPVTIDVDKIADDLNLKDVNFKPSGAAINPLTHELFIISS
                     VNKALVITDMNGHFKKVYPLSSRLYKQPEGIAFTPKGDLLISNESSDEGSANIQVIKY
                     KKIAQ"
     gene            1737..5408
                     /locus_tag="VEV83_21020"
     CDS             1737..5408
                     /locus_tag="VEV83_21020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HYK47679.1"
                     /translation="MIRSCIIMLAALFLSHPVFSQADSLQANTADSVEQRIVLIGDAG
                     SLHNGRHYVVNAVQKNIKLDSNTTIVYLGDNLYYTGLPDDAVPGYDVRRAVLDSQVTI
                     AKGTAAKVYFMPGNHDWNREGPGGWEAIVREGQYIDRLGDKNVKFWPEDGCPGPVEVP
                     LNKDVVLIIMDSQWWLHPYDKPGIESDCPYKTKEEVLAQLEDLLSRNSQKLVLFACHH
                     PMKSYGIHGGYFTWKQHIFPFTDMKPNLYIPLPVIGSIYPITRSVFGTPQDLHAPGYQ
                     NMIRDLQSVLKQHSNVIYVAGHEHNLQLIKDTSSYYIISGAGTNMSRVSKNKNELYGK
                     QQWGFATLEVSKNKNVNFNFYEVYGDSVVHAYDSTLVNFSKQEPEAIDTVKSVVVAGS
                     AFKDSVIAKAHPEYDSVNSVQRFFLGDNYRRIWATPVQLKVFDLTKQGYTIKSLGGGK
                     QTASLRLADKDGTEWTLRSINKNPEKAIPVNLRGTIAQDIVQDMISASHPYAALAIPD
                     LANAVNVPEAEPFFYYMPDDPALGSYRQKFSNQVVSLELREPTINGENAKSTAKIIEQ
                     FIEDNDDRIDEEEVLRARLLDMYIADFDRHFDQWKWGTSDTGEGKVYYAIPRDRDQAF
                     FNSNGLLLELASFRLLPFLKGFKSDYRSIVWFNYVERDFDRFFLNRLDRQTWERVLAD
                     FQKSLTDSVITVAVNKMPPEVAAINGESIIEKLKSRRSKLPQAALKYYDFLSKIVTVV
                     GSNKEEYFHISNANDSLKVNVYKKEKTTHDTSSLMYSRVFDPHVTKEIRLFGLNGQDM
                     FEVDSNVSSRIKLRMIGGKGFDTFDINGNVRNYVYDFTAEKNFIVHTSRTKDRTSADP
                     YVNAYSPTGFQYNIVHFPRLNLGYNVEDKFLVGAGFLRRTYGFRKEPFASEHRISTLF
                     AFFRHSYQLRYQGEFNHVFGKQDILVNAIHVDPTLNNFFGLGNETKIDPAKDISYYEA
                     RYRYNEADILLRRRLFSMVHVMAGPTVYHYWNKYSDNSDKILGNPSSIGLDSSSIYSQ
                     KTYVGGKLNLLINNLDNVLLPTRGINWLTEFTSVAGVGETSKPYTALTTDMSVHAALT
                     DPAKVVGVLRLGYGQIFSKHYEYFQMMNLGANNILRGFRKDRFSGTALAYTSLELRVK
                     LFQSRSYFLPGDVGIIGFNDLGRVWLRDQKSTLWHDSYGFGFYYTAYNYVLISATMAF
                     SKEEQLFNFSLGTKFNITF"
     gene            5418..6629
                     /locus_tag="VEV83_21025"
     CDS             5418..6629
                     /locus_tag="VEV83_21025"
                     /inference="COORDINATES: protein motif:HMM:NF040152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pycsar system effector family protein"
                     /protein_id="HYK47680.1"
                     /translation="MDYNLIYKKAEGYVTGLFEKFQNEKLVFHNLQHTRTVVERTKEI
                     AAHYSLSERDMLVLYVASWFHDTGHLYTPGLKNHEEKSVDVMRKFMADYASDTELISE
                     IEACIMSTKMPRNPASLIQHILCDADTYHFGTKEFKDTNKRMREEYQLREERVDKKVW
                     DENTLQMLNTHQFYTSYCKDLLDEKKKDNIRKLKKKTKEYEKEKDDLKINEASAFATK
                     GIQTMLRLTSENHLKLSDMADHKANILISVNAIIISVILGVLMRKLDEAPNLTIPTII
                     FLAVAVTTIVISILATRPKISGGTFSEQDVIDKKTNLLFFGNFYKAPYEQYDTAMRKM
                     MKDPDYLYGSLVKDIYFLAVVLGRKYRLIRIAYYIFMVGIIVSVVAFAIASLFFGMGT
                     ATSSSSSAMPL"
     gene            6642..>7736
                     /locus_tag="VEV83_21030"
     CDS             6642..>7736
                     /locus_tag="VEV83_21030"
                     /inference="COORDINATES: protein motif:HMM:NF014553.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HYK47681.1"
                     /translation="MFYNRDLSWLGFNLRVLQEAADKNVPLYERMKFLAIFSSNLDEF
                     FRVRYPYILAFSKLGRKTQLQLNTDPDDELPSRIQAEVGSQLKLFGNILEQDIIPELR
                     ENRIIFYYNTPIAEAHLPEVREIFLSEVLSFIQPIVLDESARQKFMPENNRLYFVVTI
                     KEPEKVTLTQAVVNIPTEKLPRFFVLSPQDGFEYVIFIDDIIRENLSRLFPGMEIHGA
                     YSFKLNRSAELALDLEYSQNLLQKIEKQLKKRDFGPPSRLLYEPGLPRNVQLFLASEF
                     DVKPDELFSGGRYHNIKDLADFPRFNKTLTYEKWKPLASSEIIDSGDVFNVLDRQDIL
                     LHIPYHSYNLVLAFFNQAAVDPKVTEMYITL"
BASE COUNT         2324 a         1660 c         1706 g         2046 t
ORIGIN      
        1 aagacatatt caagagatga ttttcatgca catccccagg agtacgagtg ccttttcctt
       61 ccttttgcgc tcgaaacgga tgttctcatg aatggtgttt attgggatat acacgtaccc
      121 cgtttatttg aaatggatga cttaaaaaga agcgatttca ggatcaaaac tatcgctgac
      181 attaccgacg atacgtatgg cagcgtgccc tgcaatatgg gcgatggtac catcgatgac
      241 ccagtgtatg gcgtagaaag ggccaccggg aaaaaaacag cgccgtacct tgatggcagc
      301 atcgacctga tggcagtagg caacttgcca aacgagttgc caagagacgc aagccggttt
      361 tttggtgagc aattaataaa acatgtgctg acggatcttg tcaccggcgg cagcgcagta
      421 attgaacgcg cgaccatttt aaaacaagga cagctcactc cgcatttcga ataccttgaa
      481 gactacgccg gtcattgatg tcattcgcga ccgcagtttt gtaattacgg ttagcggcgt
      541 gcaaccgttt cttatcctca aatacccttc cttgtccgat caaattttac cattagggca
      601 aaagcccgtt tcggaaagtt tccataggcg tcctgtaacg acggcgtaat aaatcgaaaa
      661 ctcatgcggt agggtttagc gcggtttgtc gcacaacaat gattccgaaa cattatttca
      721 cctttgccta aattcgtgga atacaattac aaaacgcaat atcgtggata gtcttcctca
      781 attcgcgaat gcaaaattgc ctggcagcaa aaaatctgtc cgaaatattt tcttaagaag
      841 cggcaaggga tttgacttct ttagtcagca attgaaaaaa caagcaggat tagtatgaaa
      901 agtcttaaat cgtttttaaa cgttatcgta gtcactacat ttattctttc ctgcaataat
      961 cgcccaaatt atccaacacc gcccggctat gatctgaacc acccgaccac ggtgcggctt
     1021 cctacccagc ttgacgagat atcgggcatt atctactatc caaaagacac cggggtcttt
     1081 gcgatcagcg atgcaaccgg ctctttatac aaaatctttc cggatcgaaa taccaccgtt
     1141 cagaaatgga aattcggcga caatgaagat tatgaagatg tgcaactggt tgacagtgtc
     1201 ttttacgttt tatcaagcaa aggaaatctt gtttcaataa gattttcggg acatgattct
     1261 cttcaaacct ccagctttaa atttcccgac aaaaagaacg agtttgaaag tttgtattat
     1321 gattcgtcat taaggaagct tgtgcttatc tgcaaagatt gccatgacga caaaaaaaat
     1381 agcgtgagct cctggtcgtt tgatattgat caccaggcct tcgataaagg gccagtgact
     1441 atcgacgtgg ataagattgc agacgatctg aatttgaagg acgtaaattt taaaccatca
     1501 ggcgcagcca tcaatccctt gacgcacgag ttgttcataa tttcctcggt gaataaagcc
     1561 ctcgtgatca cagatatgaa tggacatttt aaaaaagtgt atccattaag ttcccgcctg
     1621 tataaacaac cggaaggcat tgcctttact ccaaagggcg atctcctgat ctcaaacgaa
     1681 tcgtcagatg aaggctctgc aaatatccag gtgataaaat ataaaaagat agcgcaatga
     1741 tccggagctg cattataatg ctcgctgctt tatttctttc ccatcccgtt ttttcccagg
     1801 ctgattcttt gcaggctaac accgcagact cggttgagca acgcattgta ttgatcggag
     1861 atgccggttc tctccacaat ggcaggcact acgtagtgaa cgcggtgcag aagaatataa
     1921 agctggatag caatacaacg atcgtttacc tcggagacaa tttatactat acaggtctgc
     1981 cggatgatgc ggttccaggt tacgatgtaa gaagagctgt gctggattcg caggtaacaa
     2041 ttgcaaaagg cactgctgcg aaggtctatt ttatgcccgg caaccacgac tggaaccgcg
     2101 aggggcccgg aggatgggaa gcgatcgttc gcgaaggaca atatatagat cgtcttggcg
     2161 ataagaacgt gaagttttgg cccgaggacg gatgtcccgg tcccgttgaa gttcctctta
     2221 acaaggacgt ggtgcttatc atcatggaca gccaatggtg gctgcaccct tacgataaac
     2281 ccggaataga atcggattgt ccttacaaaa caaaagagga agtactggct caactggaag
     2341 acctgcttag caggaattcg caaaagcttg tgcttttcgc ctgtcatcac ccgatgaaga
     2401 gctatggaat tcatggcgga tattttacgt ggaagcaaca catattcccg ttcaccgaca
     2461 tgaagccaaa tctttatatc ccgctgccgg tgatcggctc catctatccc attacaagaa
     2521 gcgtattcgg tactccgcag gaccttcatg ctcccggtta tcaaaacatg atacgtgatt
     2581 tgcagagtgt actcaaacaa cattcaaacg tgatttatgt tgccggtcat gaacataacc
     2641 tgcagttaat aaaggacacc agttcatatt atattattag tggagcagga acaaacatga
     2701 gccgtgtctc aaaaaacaaa aatgagttgt acggaaaaca gcaatgggga tttgccacac
     2761 tggaagtatc aaaaaacaag aatgtaaact tcaattttta tgaagtgtat ggagattctg
     2821 tggtgcatgc atacgacagc acgttggtga atttttcgaa gcaggaaccc gaggcaattg
     2881 atacggtaaa atcggttgtc gtggcagggt cggcgttcaa agacagtgta attgcaaaag
     2941 cccatcctga atacgatagc gtaaacagtg tacaaaggtt ttttttgggt gataattacc
     3001 ggaggatatg ggccacgccg gtacagttaa aagtcttcga tctaaccaaa cagggataca
     3061 cgataaaaag tcttggcggg ggaaaacaaa ctgcttcact tcgcctcgca gataaagatg
     3121 gaacagaatg gacactgcgc agcattaata aaaaccctga aaaagcgata ccggtaaacc
     3181 tgcgcggcac gattgcacaa gacattgtac aggatatgat ctcagcatcg catccttatg
     3241 ctgcactcgc aatccccgat cttgcaaatg ccgtaaatgt acccgaagct gagccattct
     3301 tttattacat gcccgacgat ccggcgcttg gaagttatcg gcagaagttt agcaaccagg
     3361 tcgtgtctct tgagcttaga gagccgacga tcaatggtga aaacgcaaaa agcacggcta
     3421 aaataattga gcagtttatt gaagataatg atgaccgcat tgacgaggag gaagtactaa
     3481 gagcgcgctt gctcgacatg tacatcgctg acttcgacag gcatttcgat cagtggaaat
     3541 ggggaacttc tgataccggt gaaggcaaag tgtattacgc cattccccgc gacagggacc
     3601 aggcgttttt taattcaaac ggattactcc tggagctcgc atcatttcgt ttgctccctt
     3661 tcctgaaagg atttaaatct gactaccgtt ctatcgtttg gttcaattac gtcgaacgtg
     3721 attttgaccg gttttttctt aacaggcttg acaggcaaac ctgggaacgc gtgcttgcag
     3781 attttcaaaa gagcttaaca gacagcgtca taacggttgc ggtaaacaaa atgccgcctg
     3841 aggtcgcagc aatcaacggt gaatctatca ttgaaaaatt aaaaagcagg agaagcaaac
     3901 taccgcaggc agcgctcaaa tattacgact tcctgagtaa gattgttacg gttgtgggaa
     3961 gcaataaaga ggaatatttt catatttcaa acgccaatga cagcctgaaa gtgaatgtct
     4021 acaaaaagga aaaaactact catgatacca gctctctcat gtacagccgc gtctttgatc
     4081 cgcatgttac aaaagagatc aggttatttg gtttaaacgg ccaggatatg ttcgaagtag
     4141 attcaaatgt ttcttcccgc attaagctga gaatgattgg cggcaaagga tttgacacat
     4201 tcgacatcaa cggcaatgtg agaaattatg tttacgattt cactgcggaa aaaaatttca
     4261 ttgttcatac aagccggaca aaggatcgta cttctgctga tccatacgtc aacgcttatt
     4321 caccaacagg ctttcaatac aacatcgttc attttccaag gctgaacctc ggttataatg
     4381 ttgaagataa atttttggtg ggggctggct tcctgcggcg tacgtacggc ttcaggaagg
     4441 aaccgtttgc aagcgagcac cggatttcta cactgtttgc tttttttcgc cattcctacc
     4501 agctgagata ccagggagaa tttaatcatg tttttggcaa acaggatatc cttgtaaatg
     4561 ctatacacgt agatccaacg ctaaataatt tctttggtct tggtaacgag acaaaaatag
     4621 acccggcaaa agacatctcc tattatgaag cgagatacag gtataatgaa gcggatattc
     4681 tcttaaggag aagattgttt tcaatggtgc acgtaatggc cgggccaaca gtatatcatt
     4741 attggaacaa gtattcagac aacagtgata aaatcttagg aaatccatca tcaattgggt
     4801 tggactcgtc gagtatttac tcgcaaaaaa cttatgtggg tggaaaatta aatttactca
     4861 tcaataatct ggataacgtt ttattaccta cacggggcat caactggctc actgaattta
     4921 cttccgttgc cggagttggg gaaacaagta agccctatac cgcgctcacc acagatatgt
     4981 cggtgcacgc agccctgacg gatccggcaa aagtcgtcgg cgttttacgt ttaggctatg
     5041 gccagatctt cagcaagcat tatgagtatt ttcaaatgat gaacctggga gcaaataata
     5101 ttctcagagg ttttcgaaaa gaccgtttct cgggtacagc gctggcatac acaagccttg
     5161 aattacgcgt caaactgttt caatcgcgat cctacttttt accgggggat gttgggatca
     5221 ttggttttaa tgacctgggc cgtgtttggt tgagagatca aaaatcaaca ctctggcacg
     5281 attcgtacgg ttttgggttt tactacacag cgtataacta tgtacttatt tctgccacga
     5341 tggctttttc aaaggaagag caattattta atttttcttt gggcactaaa ttcaatataa
     5401 ctttctaaat aaaaagtatg gactataacc tcatttataa aaaagctgag ggctatgtta
     5461 cgggtttgtt tgaaaaattt caaaatgaaa aattagtttt tcataacctg cagcatacaa
     5521 gaacggtagt agaaaggacc aaagaaattg ctgctcatta cagtttaagc gagagggaca
     5581 tgctcgtgtt atacgtagcg tcatggtttc atgatacagg acatttatat acgccgggac
     5641 tgaaaaatca cgaagaaaaa agtgtggacg tgatgcgaaa atttatggca gactacgcat
     5701 cggacacgga attgatttct gaaatagagg cctgtataat gtcaacaaaa atgccccgca
     5761 acccggccag ccttatacaa cacatacttt gcgatgcaga cacctatcac tttggcacaa
     5821 aagaattcaa agacacaaac aaacgtatgc gcgaggaata ccagttacgg gaagagaggg
     5881 tggataaaaa ggtatgggat gagaacacac ttcaaatgct gaacacccac cagttttata
     5941 catcttattg caaagacctt cttgatgaaa agaaaaaaga caacatccgg aagctaaaaa
     6001 agaagaccaa agagtatgag aaggaaaaag atgacctgaa gataaacgaa gcaagtgctt
     6061 ttgcaacgaa agggatacaa actatgttaa gacttacttc cgaaaatcat ttgaagttaa
     6121 gcgacatggc agaccataaa gccaacattc ttatttctgt aaatgcgatc atcatttccg
     6181 tcatactcgg cgtcttgatg cgcaagctgg atgaagcacc gaacctcacc attcccacaa
     6241 taatcttttt ggcagtggct gtgactacga tcgttatctc catccttgca acgaggccaa
     6301 aaatttcggg tggcaccttc agcgagcagg atgtgataga taaaaagaca aatcttttat
     6361 tcttcgggaa tttttataag gcgccgtacg aacagtatga cactgccatg cggaaaatga
     6421 tgaaagaccc ggactatttg tacgggtcgc ttgttaaaga catctatttc ctggcagtag
     6481 tcctgggccg caaataccgg ctcattcgta ttgcatatta tattttcatg gtcggcatta
     6541 tcgtttccgt tgttgcattc gctattgcat cattgttttt tggaatgggt acggcaacct
     6601 catcttcgtc ctccgcgatg cccctttaat caggaataag catgttttac aaccgggatt
     6661 taagttggct tggatttaat ctacgcgtcc tgcaggaagc ggcagacaaa aatgtcccgt
     6721 tgtatgaacg catgaaattc ctcgcgatat tttcttcgaa cctcgacgaa tttttcagag
     6781 tacgctatcc ttatatcctc gccttttcaa aacttgggcg aaaaactcaa ttacaactca
     6841 atacagatcc ggacgacgaa ctgccttcga ggatacaagc tgaagttggc agccaactga
     6901 aattatttgg taatatcctg gaacaagata ttattccgga actgcgtgaa aaccgtatca
     6961 ttttttacta caacacgccg atcgccgagg cacatctgcc cgaggtccgg gaaatattct
     7021 tgtcagaggt cctctcgttc attcagccca tcgtgctcga tgaaagtgcg cggcagaaat
     7081 ttatgcctga aaacaacagg ctttattttg tcgtcactat taaagagcct gaaaaagtaa
     7141 cattgacgca agccgtcgta aacataccca ccgaaaaact gcccaggttt tttgtgttgt
     7201 cgcctcaaga tggatttgag tatgtaattt ttatcgacga tatcattcgc gaaaatttat
     7261 cgcgcctgtt tccaggcatg gaaatacatg gcgcttacag ttttaaattg aacaggagcg
     7321 ccgaactcgc actcgacctg gagtacagcc agaatctgtt gcaaaagatc gaaaagcaat
     7381 taaagaaaag agatttcgga ccgccgtcca ggctcctgta tgagcccggt ctgccacgaa
     7441 atgtgcaact ttttctcgca tctgaatttg acgttaaacc agacgaatta ttttcagggg
     7501 gccgctatca caatattaaa gaccttgccg attttccgag gttcaacaag acgcttactt
     7561 acgaaaaatg gaagccgcta gcatcatcgg aaattatcga tagtggagac gtttttaatg
     7621 tcctcgacag gcaggacata ctgttgcaca ttccctatca ttcatataac ctcgtgctcg
     7681 cttttttcaa ccaggccgcg gtagacccaa aggttactga gatgtatatt accctt
//
LOCUS       DASQJI010000798         3713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1814493,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000798 DASQJI010000000
VERSION     DASQJI010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814493"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VEV83_21035"
     CDS             <1..395
                     /locus_tag="VEV83_21035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYK47682.1"
                     /translation="LREELKLTGTKKGCDHGQCGACTVHVDGKRVLSCLTLAIMKEGK
                     KVTTIEGLANDDKLHPMQDAFIKHDGFQCGYCTPGQIMSGIACIREGHAGSDEEIREY
                     MSGNICRCGAYTNIVAAIADVKKGGHEV"
     gene            392..1375
                     /locus_tag="VEV83_21040"
     CDS             392..1375
                     /locus_tag="VEV83_21040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HYK47683.1"
                     /translation="MINFEYIRASTPKSAIDALTKDSAAQCIAGGTNLVDLMKKGIAT
                     PQKLIDITNLSLKEIKKDGDKLVIGALALNSEVAENELVLKEQPLLSLALKAGASQQI
                     RNMATVGGNMLQRTRCAYFYNTDMPCNKREPGSGCGALNGFNRMHAIFGASDKCIAVH
                     PSDMCIALVALNATVLVSGPEGDRRIPFQNFHRLPGDTPQKDNTLERGELIIAVEIPG
                     NQLQHHVHYLKVRDRTSYAFAVVSVAAALQMQGDIINDVRLAMGGVAHKPWRLTEAES
                     FLKGKNTSEANFQEAAKLAMADAKGYGQNNFKLKLAPNSIVETLKTATGKA"
     gene            1387..3624
                     /locus_tag="VEV83_21045"
     CDS             1387..3624
                     /locus_tag="VEV83_21045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HYK47684.1"
                     /translation="MKKHFNKSEKEAINRVDGKAKVTGAATYAADQKIQNVAYGFLVG
                     STIAKGRIKSIDTKSVEQAPGVLAVFTHLNAPKIPGYQTGNDPAKPPTGNQPLRIFYN
                     DEILYYDQPIALVIADTFERVLYAATLVKAQYEKASHQTDLEANLNKAKAPSSEWMRD
                     YNRREPDAYKNAPVKMEQQYYHPREVHSPMELANIIASWEGENKVTIYTKTQGVLDTQ
                     RSIKDAFQLPAENITVHAEYVGGAFGMGLRTWPYEIAAVMGAKKIGKPVKLVLHREQM
                     FTNVGYRPATLQKIGMGATADGKLVGITHEATGNTSSYEEFTEGSTGISRMLYACPNV
                     TTRYRIVPLDVCTPIWMRGPGETTGCYALESAMDEMAYALNLDPIEFRLRNHADADPE
                     SNQPWSSKYLKECYQIGAEKIGWKDRKLQPRVLQENGWLIGYGMGTGSFAAMRWNATV
                     KATLQPDGSLVLQCSVNDMGPGTATMMTAIASDAMGIPADKITVHIGNTTLPPGSTQG
                     GSATTSTVGGAVSDVCSAVKEEIATLAGKEGSPFRTANTLNLKAEDITFSDKGITSKN
                     DASLNISYADLFKQNNLPALEVTKEGRGEQLPYAMHSFSVHFVKLRVHPPTGRVKIDH
                     VVSCADAGTIVSPKTAESQMKGGAVGGIGMALMEEGIFDHRFGRVINNNLADYHVPVN
                     ADIPNIDVLFVNKKDPYINPVGSKGLGEIALIGMAAAVANAVFNATGKRIRDLPITLD
                     KLIEV"
BASE COUNT         1160 a          743 c          884 g          926 t
ORIGIN      
        1 tattgcggga ggaattaaag ttaaccggaa caaagaaagg atgcgaccat ggccagtgcg
       61 gtgcttgtac cgtacacgta gatggtaagc gcgtgctttc ctgcttaaca cttgccatta
      121 tgaaggaggg aaaaaaagtt accacgattg agggattagc aaacgatgac aaactgcatc
      181 cgatgcagga tgcatttatc aaacacgacg gatttcaatg cggctattgt acaccgggac
      241 aaatcatgtc gggtattgcc tgtatccgtg agggtcatgc cggttccgat gaagaaatac
      301 gtgaatatat gagcggcaat atttgccgtt gcggtgctta caccaatatt gttgcagcta
      361 tcgctgatgt aaaaaaagga gggcatgaag tatgattaat tttgaataca tacgcgcttc
      421 aacacccaag agtgcaatag atgcactaac caaagattct gctgcgcaat gcattgcagg
      481 cggtactaat ctcgttgacc tgatgaaaaa agggattgcc acaccacaga agttaattga
      541 catcacgaat ctttctctaa aagaaataaa aaaagatggt gataagttag taattggtgc
      601 attagcgtta aatagcgaag tagctgaaaa tgaattggtg cttaaggaac aaccactact
      661 ttccctggcg ctcaaagccg gtgcttctca acaaatacgc aacatggcta ccgttggcgg
      721 caacatgctg cagcgtaccc gttgcgctta tttttataat acggatatgc catgcaacaa
      781 aagagagccg ggcagtggtt gtggtgcttt gaatggcttt aatagaatgc atgcgatttt
      841 tggtgcttca gataaatgca tagctgtgca tcccagcgac atgtgtattg ctttagtggc
      901 tttgaatgcc actgtactcg taagcggacc cgaaggcgac cgtcgcattc cattccaaaa
      961 ttttcatcgc ttaccgggcg atacaccgca aaaggataat acattggaaa ggggcgaatt
     1021 gattattgct gtggaaatac cgggtaatca gttgcagcat catgtacatt atttaaaagt
     1081 cagagatcgt acatcgtatg cttttgccgt agtttctgtt gctgctgcat tacaaatgca
     1141 gggagatatt atcaatgacg ttcgactcgc tatggggggc gttgcgcata aaccctggcg
     1201 gcttacagaa gcggaaagtt ttttaaaagg gaaaaatacc tcagaagcaa actttcagga
     1261 ggctgcaaaa ttagctatgg ctgatgctaa agggtacggt caaaacaatt tcaaattaaa
     1321 gttagcacct aactctattg ttgaaacact taaaacggct actggtaaag cataaaaaat
     1381 attcagatga aaaagcattt caacaagagc gaaaaagaag ctattaaccg tgtagatggc
     1441 aaagcaaaag taaccggtgc agctacctat gcggctgacc aaaaaataca aaatgttgcg
     1501 tacggttttt tagtaggcag tactatagcc aaagggcgca ttaaaagtat cgatacaaag
     1561 agtgttgaac aagcaccggg agtactggct gtgtttacgc atttgaatgc gccgaaaatt
     1621 cccggttatc aaacaggcaa tgacccagcg aagccaccga caggcaatca gccgctgcgc
     1681 attttttaca atgatgaaat attgtattat gatcagccta ttgccttagt gatcgcagat
     1741 acctttgaac gggttttata tgctgcaaca ctggtgaaag cacaatatga aaaagcatca
     1801 caccaaacag atctggaagc caacttaaac aaggctaaag ctccttcatc ggaatggatg
     1861 agagattata accggagaga accagatgct tataaaaacg cgcctgttaa aatggaacag
     1921 cagtattatc atccaaggga agtgcacagc cctatggagt tggcaaacat catagcaagc
     1981 tgggagggag aaaataaagt aaccatttat accaagacgc aaggtgtgct tgacacgcaa
     2041 cgaagtatta aagacgcttt tcaattgcca gcggaaaaca tcaccgttca tgcagaatat
     2101 gttggcggcg cttttggcat gggtttgcgt acatggcctt atgaaattgc tgcagttatg
     2161 ggagcaaaga agattggcaa gccagtaaag ttggttttac acagagagca aatgtttacc
     2221 aatgtaggct atcgtcctgc cacgctgcaa aaaattggaa tgggtgcaac tgccgatggc
     2281 aagttggtag gaattacaca tgaagctacg ggtaatacat cttcatatga agaatttacc
     2341 gaaggctcga caggtatttc acgaatgttg tatgcttgcc ctaacgttac aacgcgctac
     2401 cgcattgttc cattggatgt gtgtacacca atctggatgc gtggtccagg tgaaacaaca
     2461 ggctgttatg ctttagaaag cgccatggat gaaatggcat atgcactaaa cttagacccg
     2521 attgaatttc gtttacgcaa tcatgcagat gctgaccctg aaagcaatca gccatggtca
     2581 agcaaatatt taaaagaatg ctaccaaata ggggctgaaa agattggatg gaaagaccga
     2641 aaactgcagc cacgagtttt gcaggaaaat ggctggctga ttggctacgg catgggcacc
     2701 ggttcatttg ctgctatgcg ctggaatgct acagtaaagg cgacactgca accagatggt
     2761 agtttggtgt tgcaatgttc ggtaaatgat atgggtcccg gtaccgcaac aatgatgaca
     2821 gccattgctt ctgacgccat gggaatacca gcagataaaa tcacagtgca catcggtaat
     2881 accacattgc cccccggttc aacacaaggc ggttctgcta caacctctac tgtaggcgga
     2941 gcggtaagcg atgtatgttc tgcagtaaaa gaggaaatag caacacttgc cggcaaagaa
     3001 ggttcacctt ttcgcactgc aaacacatta aatttaaaag ccgaagacat caccttttct
     3061 gataagggaa taacgtcaaa gaatgacgct tctcttaata taagttatgc cgacttgttt
     3121 aaacagaaca atttaccggc actggaagtt actaaggaag gaagagggga acaactacca
     3181 tacgctatgc actcattctc ggtgcatttt gttaagctgc gggttcaccc gcccactggc
     3241 cgagtgaaaa tagaccacgt agtttcctgc gctgatgcag gcacgatagt tagtccaaaa
     3301 acagcagaga gtcaaatgaa gggcggtgct gtaggcggta ttggtatggc gctaatggaa
     3361 gaaggaatat ttgatcatcg gtttggaaga gtaatcaata ataacctcgc tgattaccat
     3421 gtgccggtca acgcagacat tccaaatatt gatgtccttt ttgtcaacaa aaaagatccg
     3481 tatattaatc ctgtaggttc aaaaggctta ggggaaattg cgttaattgg catggctgct
     3541 gccgttgcca acgcggtatt taacgccact ggaaagcgaa tccgtgattt acctattaca
     3601 ctcgataagc ttattgaagt ataagaaaat gattgaacat ttgtttcgtt gcctccctgt
     3661 aaggaaaaag cgtcggactt aattacacaa cttgagttca ttcatgcctc tga
//
LOCUS       DASQJI010000799        11048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_122998,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000799 DASQJI010000000
VERSION     DASQJI010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 11048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11048
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122998"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2109
                     /locus_tag="VEV83_21050"
     CDS             <1..2109
                     /locus_tag="VEV83_21050"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel family protein"
                     /protein_id="HYK47685.1"
                     /translation="NLQDVTVTAKKQFIEQKIDKTVINVDASPTSVGLSALELLEKTP
                     GVTVDKDGNISLKGKQGVSVMIDGKPTYLSSADLVNLLKNMPSTTLEQIELMTNPPAK
                     YDAAGNAGIINFKTKKSKAKGFNGSVTLGAGMGKYPKANESVNLNYRTGKVNLFGNYS
                     YRYNEGYQSLDITRKFRDSAGNVQSIFNQHSDMYPNYQTHTFKAGMDFYASKKTTVGF
                     VINGNFNPGNFAVDNTTDIYNAGEKLQSQTITNNNSVDKWTNYGANLNMVTKLDTTGR
                     ELSANLDYIHYYSLSNQMFNNYFYDEHGNTSSPDEILRGYLPGTINIYSGKVDYTHPL
                     KKNARIEAGLKTSYVESDNIANYDTLSNGVWMPDASRTNHFLYKENINAAYVTASKQF
                     NSKWNAQIGLRLENTISNGNQLTTGETFKRNYTQLFPTAYISYSLNDKNQFGINYGRR
                     IQRPDYADLNPFYYFLDKYTYQVGNPYLKPQFSHNIELSHSYKGMLTTTLSYTAINDV
                     IQQQLQQIDSTHTTYVRQTNLAQQRSVALSVSAGVPIAKWWRANAYVQGSYNKYSGYI
                     NNGVLNVSGPALNINMQNQFTLPKGWSMELSGYYNSKAVYGTIVGLPQGGADFAVAKN
                     VLKDKGSVKVNFRDFLGIQEWSGYSKYQNLDVTIHNKWDSRVVNVSFTYRFNKGQTGE
                     QRRHGSGADEEQGRVKSGRG"
     gene            complement(2178..2906)
                     /locus_tag="VEV83_21055"
     CDS             complement(2178..2906)
                     /locus_tag="VEV83_21055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47686.1"
                     /translation="MATATASPKKPTVRKKSATATRISKTKKQEAKKELAATYNEFKD
                     FEGQRYMGMKVGRSHKWYYDKGEWKETKITPDLWEISYAVTKRRAGHAPEGSGVPVGT
                     EYHWYILAHQNVRKLNANDYTTSMTGLKYKLAHKRADKNKWSATAKTQRKRLIKLMQE
                     LIAQLEKDPVPLEVEYNGQVYIGEAVPVSQTCHDGVCDELDVSLNDQHLGVIKCTKSG
                     WKMDSADDQGLVDAIGEEIFYWYE"
     gene            complement(3044..3325)
                     /locus_tag="VEV83_21060"
     CDS             complement(3044..3325)
                     /locus_tag="VEV83_21060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HYK47687.1"
                     /translation="MSGVHIGDALRDFLNKSKLKSGIRAVQIESVWEEIMGKTIARYT
                     EKIQIIDKTLFIYTAVGPLKQELLYQKPKIIERVNEALQEQVIHEVIIK"
     gene            complement(3361..3939)
                     /gene="msrA"
                     /locus_tag="VEV83_21065"
     CDS             complement(3361..3939)
                     /gene="msrA"
                     /locus_tag="VEV83_21065"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HYK47688.1"
                     /translation="MSDDLIASTKTDTASFGTGCFWCTEAIFERLNGVLKVTSGYSGG
                     SVPNPTYEEVSTGTTGHAECCQIVYDPSKISYEELLEVFWKTHDPTTLNRQGNDVGTQ
                     YRSVIFYHTPEQKEKAQHYKAALDSAGAFNKPIVTAIEPYTNFYSAEGYHQKYYEYNP
                     GQMYCRLVIAPKVEKFEKVFKTKLKSSAKSEE"
     gene            4275..5015
                     /locus_tag="VEV83_21070"
     CDS             4275..5015
                     /locus_tag="VEV83_21070"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYK47689.1"
                     /translation="MEKYYSPSLEDNPGSPTRRIAIVTGASGNLGQAVIKKFLDEGFH
                     VIGTVIPNDPIPVDFTEDKFEKVIVDLMSEDDSQEFIDKTLSNHKRIDAAVLTVGGFG
                     MGNIAETKTSDIAKQYKLNFETAYNVARPVFLQMLKQNSGRIFIVGSKPGLDTRNGKG
                     MIAYSLAKSLIFRLAELMNDEAKGKNVVTCVVVPSTIDTPQNRKAMPGANFDNWVKAE
                     AIADVIYYNCTTNASVLRETVLKVYNNA"
     gene            complement(5028..6011)
                     /locus_tag="VEV83_21075"
     CDS             complement(5028..6011)
                     /locus_tag="VEV83_21075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HYK47690.1"
                     /translation="MTETIINLDTLNPIEFFGVNNRKLDILRKKFPLLKILSRGTQIK
                     LSGAPEQVESAKEKIDLIIQYMERNGDMSENYFEQILGGDDAETIDNFVDKNPNDILV
                     FGPNGKTVRARTVNQKKMVQAADTHDIVFALGPAGTGKTYTAVALAVRALKNKLVKKI
                     ILTRPAVEAGENLGFLPGDLKEKIDPYLRPLYDALDDMIPADKLGYYMSTRTIEIAPL
                     AYMRGRTLDNAFIILDEAQNSNDLQLKMFLTRIGPNAKAIITGDPTQIDLPKNQHSGL
                     HKAMRILKHINGIAHIELNEEDVVRHRLVKAIIRAYDLEHKKETSGSELKH"
     gene            complement(6455..7111)
                     /locus_tag="VEV83_21080"
     CDS             complement(6455..7111)
                     /locus_tag="VEV83_21080"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HYK47691.1"
                     /translation="MDRRKYLKTLGVTAVTAGVLVDACKTEKKEAPTATENANGVDRM
                     AEEKAYEDTIKNSAKFFTPEEFATITVLADIIIPKDEVSGSASDAKVADFIEFIVKDE
                     PDYQTPLRGGLRWLDIQCLDRYQKAFKGCSAEQQIEMVDQIAYPEKAKPEMAAGVSFF
                     NLMRKLTTTGFYSTEMGWKDIGYVGNKPNQWNGVPEEVLKQYNLAYSEKELKECVSFS
                     "
     gene            complement(7130..8872)
                     /locus_tag="VEV83_21085"
     CDS             complement(7130..8872)
                     /locus_tag="VEV83_21085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK47692.1"
                     /translation="MGTLQIKKNPKKYDAVIIGSGAGGGMATYVLAKAGLKVCLIEAG
                     PMYDPAKNSNQMQPPWASPRRGKSTKFRPFGDFDGCYWGWNIDGEPYTHVGDTKWEWW
                     RARMLGGRTNHWGRITLRFGPRDFKRKSIDGLGDDWPIGYEDVKPYYDKVESLIGVFG
                     TNEGLPNDPDGVFLPPPKPRLHELMIKKAATGINIPVIPSRLSILTKKINDERGQCFY
                     CAQCGRSCKVYADFSSSSVLVIPALKTGNVDLLTNCMAREVLTNREGLATGVSYVDKE
                     DMQEYQVEGKTVILAGSACESARLLLNSKSQRHPNGLANSSNVVGKYLHDSTGADMGG
                     VLPELFDRKRYNEDGVGGMHVYTPWWLDNAKLDFPRGYHIEYWGGMDQPAYGFGDGIE
                     GINGKFQVHGKTKEAGGYGKSLKEDLRFFYGAGVGMAGRGESIALETNYCEIDPTTVD
                     KYGIPVLRFNTKYTDYEIKQAKHMKETFKEILTAMGAVIMYGDDGPEDNYGLHAPGNI
                     IHEAGTVRMGSDPKRSALNPFSQAHDCKNVFCVDGGPFVSQADKNITHTILALSWRTS
                     DYIVDQLKRQNIPA"
     gene            9026..10528
                     /locus_tag="VEV83_21090"
     CDS             9026..10528
                     /locus_tag="VEV83_21090"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HYK47693.1"
                     /translation="MNLIAIDIGTTHCKAVIINEKARVLKTFQSTNKTITPRPGSNEQ
                     DAGAIFDDVAGLLCDSFAFCEQKNIGCVSFSAAMHSLIVVNKDGKPLTNMLTWADLRS
                     ASYAHELKVNPAAQKIYETTGVPLHAMSPLCKIIWLRNEAAEVFLNAFKFISIKEYVF
                     FRLFGKYIVDHSIAAATGLLDEKKLDWHDEALQLAGINRSQLSALCPVGHYETELLPP
                     VQKQLQIENTIPFVLGGSDGALANLGCGAIDAGSSAMTIGTSGAIRVITEKYSPDKKQ
                     RLFSYYLTDGMYLTGGAINNGGNVVKWFGENVLHENLDSEETFQSLLHDAMLLRAGAE
                     GLLFLPYISGERSPVWDENARGAFVGLTSAHTRAHLTRAVIEGISFALFDVLKAVEET
                     IGAIETIYLSGGVIKSDAWMQLLADITRKKVIVSDAADASALGAAFIGMKAIGILDDL
                     KNVRRFLHEVKTFLPNLEQADRYSKYFELYRTLYLQLKATFETITKIQDC"
     gene            complement(10548..>11048)
                     /gene="eno"
                     /locus_tag="VEV83_21095"
     CDS             complement(10548..>11048)
                     /gene="eno"
                     /locus_tag="VEV83_21095"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585660.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HYK47694.1"
                     /translation="KIISSDEMVEYWTNWVSKYPIISIEDGMAEEDWDGWKKLTDALG
                     HKVQLVGDDLFVTNTKILQRGITNGIANSILIKVNQIGTVTETINAVQLAQTNGYTTI
                     MSHRSGETEDTTIADLAVALNCGQIKTGSASRTDRVAKYNQLLRIEEALGKNGVYPKG
                     RIRFGR"
BASE COUNT         2977 a         2534 c         2408 g         3129 t
ORIGIN      
        1 aatttgcagg atgtgaccgt cactgcaaaa aagcagttca tcgagcaaaa aatcgataag
       61 acagtgataa acgtcgacgc ttcgccgacg agtgttgggc tttcagcttt agaactcctg
      121 gagaaaacac ccggtgttac cgtcgacaag gatgggaata ttagcctaaa gggtaaacag
      181 ggcgtttccg ttatgatcga cgggaaaccc acctacctga gcagcgctga cctggtgaat
      241 ctccttaaga atatgccgtc aaccacgctc gagcaaatcg aactgatgac aaacccgcct
      301 gctaaatatg atgccgcagg taacgctggg attatcaatt tcaaaactaa aaaatcaaag
      361 gcgaaaggtt ttaacggcag tgtaaccctc ggcgcgggca tgggtaaata tccaaaggca
      421 aatgaaagcg tgaacctaaa ttaccgaacc ggcaaagtga atttattcgg aaactatagt
      481 tacaggtata acgaaggata tcaaagcctt gacatcaccc gcaaattccg tgatagcgcc
      541 gggaatgtgc agtcgatctt caaccaacac tcagatatgt atccgaacta tcagacccat
      601 acgttcaagg cggggatgga cttttatgcc tccaagaaaa caactgttgg tttcgtcatt
      661 aatggaaatt tcaacccggg caattttgct gtcgacaaca cgacagatat ttataatgcc
      721 ggtgagaagc tacagagtca aacgatcaca aacaacaatt cggttgataa atggacgaac
      781 tatggcgcaa atttaaacat ggtgacaaaa cttgacacaa cgggcagaga attgagcgcc
      841 aacctcgact acattcacta ctactcgtta tcaaaccaaa tgttcaataa ctacttttat
      901 gatgagcacg gtaacacatc aagtcctgat gaaattttac ggggctacct gcccgggacg
      961 ataaatatct acagtggtaa agtcgattac actcatcctt tgaaaaagaa tgcgcgtatt
     1021 gaagcgggac tcaaaacgag ctacgttgaa agcgacaaca ttgccaacta tgacacgctt
     1081 tcaaacggcg tttggatgcc tgacgcaagc aggaccaatc atttcttata caaagagaat
     1141 atcaatgcag catatgtaac tgcaagcaaa cagtttaatt caaaatggaa cgcacagatt
     1201 ggtttacgtc tggaaaatac aatctcgaac ggcaaccagt taacgacggg cgaaactttc
     1261 aagcgtaatt acacccaact ttttccaacg gcgtatatca gttattcgct gaacgacaaa
     1321 aatcaattcg gtataaatta tggcagaagg atacagcgcc ctgattatgc cgatctaaat
     1381 cccttctact acttcctaga caaatacact taccaggttg ggaatccata cttaaaaccg
     1441 cagttcagcc acaacattga gttgagtcat tcgtataaag gaatgctcac aaccacttta
     1501 agttacactg cgattaatga cgtcattcaa cagcagctgc aacagatcga cagcacacac
     1561 acaacctacg tgcgtcaaac gaatcttgca caacaacgga gcgtcgcttt gagcgtaagc
     1621 gcaggtgtac cgatagcaaa atggtggaga gctaatgcat atgtgcaggg tagttacaac
     1681 aaatacagcg gttacatcaa taacggtgta ctgaatgtga gtgggcctgc tttgaacata
     1741 aatatgcaaa accagttcac gttaccaaaa ggctggagca tggaactgag tggatattac
     1801 aacagcaaag ctgtttatgg aacgatcgtt gggttacccc agggaggcgc ggattttgcc
     1861 gttgcaaaaa atgttttgaa agacaaagga agcgtcaagg ttaatttcag ggattttctt
     1921 ggcatccagg aatggagcgg atacagcaag tatcaaaatc ttgacgtaac aattcacaac
     1981 aagtgggata gtcgcgtcgt gaatgtcagc ttcacatacc ggttcaataa aggtcaaaca
     2041 ggtgagcagc gtcgccacgg cagcggagcc gacgaagaac aagggcgtgt gaaaagtggc
     2101 cgaggataaa ataaagaggg atataataga taagacaact gcctgcaatt cttgcgggca
     2161 gtttggtttt gggcagttca ctcgtaccaa taaaagatct cctccccaat agcatcaacc
     2221 aatccctggt catcagcgct atccattttc catccgcttt ttgtgcattt gatcacgccg
     2281 agatgctggt cattgaggct tacatccagt tcgtcgcaga ccccatcatg acacgtttgc
     2341 gatacgggga ctgcttcccc gatataaacc tggccattgt attcaacttc caaagggacc
     2401 gggtctttct ccaactgagc aatgagttcc tgcatgagtt ttatcaatct tttgcgctgt
     2461 gttttcgcgg tcgcgctcca tttgttttta tcggcacgct tatgcgcaag tttatatttc
     2521 aatccggtca tcgacgttgt ataatcatta gcattcagct tgcgtacatt ctggtgcgca
     2581 agaatgtacc aatgatattc ggtaccgacc ggcaccccgg agccttccgg cgcatgcccc
     2641 gcacgacgtt tcgtgaccgc atatgaaatt tcccacaggt cgggggtgat cttcgtttcc
     2701 ttccattctc ctttgtcgta ataccatttg tggcttcgac ctactttcat tcccatgtat
     2761 cgctggcctt caaaatcttt aaattcattg tatgtggccg caagctcttt ttttgcttcc
     2821 tgttttttgg tttttgagat acgagtggcc gtggccgatt tctttcgaac cgtaggtttt
     2881 ttcggagagg cggtagctgt tgccattatc catgttttga aagttagcgt tcataattta
     2941 tgccagttaa atcgcttgag gaagggtcag ctatagctgg gaagcacgcg tagcgagata
     3001 atgtttttgg ctggcataga cgtgcaagga atagttgaaa agatcactta attatgacct
     3061 cgtggatcac ttgttcctgc aaggcctcat tgacccgctc gatgatcttt ggcttttggt
     3121 aaagcagttc ctgttttaaa ggcccgaccg ctgtgtagat gaagagagtc ttgtcgatga
     3181 tctggatttt ctccgtgtac cttgcaattg tcttgcccat gatctcttcc catacgcttt
     3241 caatttgaac ggctcttatg ccgctcttca atttgctttt gttcagaaaa tcacgtaagg
     3301 catcgccgat atgtacccca gacatggagt aaaagtaaga agctgtttac aaccgtcaaa
     3361 ctattcctcg gatttggcgc tgctttttaa tttcgttttg aaaacttttt cgaatttttc
     3421 aaccttcggt gcaataacca aacggcaata catttggccc gggttgtatt cataatattt
     3481 ctggtgataa ccttcagccg aataaaagtt tgtatatggt tcgatggctg taacgattgg
     3541 cttgttgaac gcgcccgcac tatcgagggc ggccttatag tgttgggctt tttctttctg
     3601 ttccggtgta tgataaaaga tgacgctgcg atactgggta cccacgtcgt tgccttgcct
     3661 gtttaatgtt gtgggatcat gagttttcca aaacacttca agtaattctt cgtaagatat
     3721 ttttgaagga tcataaacga tctggcaaca ttctgcatgg ccggtagtac ctgtggaaac
     3781 ttcttcataa gttggatttg gtacagatcc tccgctgtaa ccactcgtta ctttcaacac
     3841 tccgttcaat ctttcaaaga tcgcttcagt gcaccaaaaa caaccggttc cgaaactggc
     3901 ggtatcggtc ttcgttgagg caattaagtc gtcgctcata tttgtagttt gtgtagtatg
     3961 ctccgcacag gagaataatg aaaaaattcc tgctaaaacc accatcggcc gcaaactcag
     4021 cagttcaaaa gaatttaatc gcatggtgca aataaccctg atgtttttaa ccgagacaag
     4081 ttaattaaca aataccacaa agcgtttccc gcctgtgatt gcgagccgca gtttaacttt
     4141 tttttcaaaa cggaaaaggc catcagggtt agcgatcaag tactgctgca cgttacattg
     4201 ttgcttccca attgatgtct caaaaagaag aaatatattt gaaaacaaag ggccagttca
     4261 tttaattaaa caccatggaa aaatattact ctccatccct tgaagataat cccggttcac
     4321 caaccaggcg tatcgcaatc gttaccggag cgtccggcaa tctcggccag gccgtaataa
     4381 aaaaattcct tgacgaaggt tttcacgtaa taggcacggt catccctaat gacccaatcc
     4441 cggttgattt tacagaagat aaattcgaaa aagttattgt agaccttatg agcgaagacg
     4501 actcccaaga gtttattgac aaaacgctct caaaccataa acgcattgac gcagccgttc
     4561 ttactgtcgg cgggttcggt atgggaaata ttgcagaaac gaagaccagc gatatagcga
     4621 aacaatacaa actaaatttt gaaaccgcct acaatgttgc aaggcccgta tttctgcaaa
     4681 tgctgaaaca aaacagtggc aggatattta ttgttggctc aaaacccgga cttgacacga
     4741 ggaatggtaa aggaatgatc gcttatagcc tcgctaaatc tttgattttt cgcctcgctg
     4801 aattgatgaa cgatgaagca aaagggaaga atgtagtcac ttgcgtagtt gtgccaagta
     4861 cgatcgacac gcctcagaat cgtaaagcaa tgcccggagc gaactttgat aattgggtga
     4921 aagctgaagc gatcgccgac gtgatctatt ataactgcac tacaaacgca tcggttttgc
     4981 gcgaaacggt gctgaaggtt tataacaatg cctaatggaa ctagcggtta gtgcttcaat
     5041 tctgaaccac tcgtttcctt cttgtgttcg aggtcataag ctctgataat agctttgacc
     5101 aagcggtggc gcacgacatc ttcttcgttt aattctatgt gcgctatgcc attgatgtgt
     5161 ttcaatatcc gcatggcttt atgtaaaccg ctgtgctgat tttttggcaa gtcaatttgt
     5221 gtgggatcgc cggtaatgat cgcctttgcg ttaggcccga tcctggtgag gaacatctta
     5281 agctggagat catttgaatt ttgcgcttca tctaaaatga taaatgcatt gtccaatgtt
     5341 cttccgcgca tatacgcgag cggtgcgatc tctatcgtgc gtgtactcat gtaatacccc
     5401 agtttgtcgg ccggtatcat atcgtccaat gcatcatata aaggccgcag gtatgggtcg
     5461 atcttctcct taaggtcgcc aggcaggaaa cccaggttct cgccggcttc taccgccggt
     5521 cgcgtaagaa ttattttctt gacgagctta ttctttaatg cccttaccgc aagggcaact
     5581 gcagtgtatg ttttacctgt gccggcagga ccaagcgcaa aaacaatatc atgtgtatcc
     5641 gctgcctgga ccatcttttt ttgattcacg gtacgggcac gaaccgtttt gccattcggt
     5701 ccgaagacca gtatatcatt tggattcttg tctacaaagt tgtcgatggt ttcagcatca
     5761 tcgccgccga ggatctgctc gaaataattc tcactcatgt ctccattgcg ttccatgtac
     5821 tggatgatga gatcaatttt ttcctttgct gattctactt gttcaggtgc gccactcagt
     5881 tttatctgtg tgccacggga aaggatctta agcagcggga attttttgcg gaggatatct
     5941 agcttcctgt tgttgacacc aaaaaattca attggattta aagtgtcaag gttaattatc
     6001 gtttctgtca aaggtgtctc tttttcgtaa aaaaatctta ttccgttctg ttaccaacgc
     6061 tcactcaaat gtattggcca gcttatgatt accaattttt tgttgttcac agaatgtgaa
     6121 ttgaagccag taaagttagt atgtaaattg aaaactattt cttaaatgga acagctccga
     6181 tcaagcggga gtgactaaaa atagattttc atgcagcgaa caactgctga ttgtaatctt
     6241 tggatgggat aaaccatcta tctgtcagta ccgtatttat agtataagtt tgcatttgat
     6301 aaaaccaagt tctatggaga ccaggaattt gaggcccttt ttggtcgtga taacaactgc
     6361 tttttctgct ttatttttta cgaggaaaag aatcagaaga gccaaccggc tcaaggcaac
     6421 acattcacga gggaatgaaa ataaataaga gaaattagga aaagctaacg cattccttca
     6481 attctttttc tgaataagcc aggttgtatt gttttaatac ttcctccgga acaccgttcc
     6541 attggttcgg cttattccct acatatccaa tgtctttcca gcccatttcc gtcgaataaa
     6601 aaccagtggt agtaagctta cgcatcaagt tgaaaaatga aacaccggcg gccatttccg
     6661 gctttgcttt ctcgggatac gctatctggt caaccatttc aatttgttgt tctgctgaac
     6721 aacctttgaa agctttttga taacggtcca gacattgtat atcaagccaa cgcaaaccgc
     6781 cgcgcagagg agtctggtag tccggctcgt cttttacaat gaattcaatg aaatccgcaa
     6841 ctttcgcatc actggcgctg ccactcactt catcttttgg aataatgata tcggccaaaa
     6901 cggttattgt cgcaaattct tccggcgtga aaaatttcgc cgaattctta attgtgtcct
     6961 catacgcttt ctcctccgcc attcggtcta caccatttgc attttcagtt gctgtgggcg
     7021 cctctttttt ttcagtctta cacgcgtcca ctaacacgcc ggctgttacg gctgtaacac
     7081 ccaaagtctt taaatattta cgtctgtcca ttttaattaa gttgaattat taggcaggta
     7141 tgttttgcct ttttagctga tccactatat aatcgctcgt tctccatgat aacgcaagga
     7201 tagtatgcgt gatatttttg tcagcctgcg aaacaaaagg accaccgtca acacaaaata
     7261 cgttcttgca atcgtgcgcc tggctaaacg gattcagcgc cgaacgcttt ggatcacttc
     7321 ccatccgcac agtgcccgct tcatgaatga tgttgccagg tgcgtgcaaa ccgtaattat
     7381 cttccggtcc atcatctcca tacatgatca cggcgcccat tgcggttaga atttccttga
     7441 acgtttcttt catgtgcttc gcctgcttta tctcatagtc ggtatatttt gtattgaatc
     7501 ggaggaccgg aattccatat ttgtcaaccg ttgttggatc gatctcgcag taatttgttt
     7561 ccagcgcgat cgattcgccc cgccctgcca taccaactcc agcgccataa aaaaatcgga
     7621 gatcttcctt caaagattta ccataaccgc cagcctcctt tgttttcccg tgcacttgaa
     7681 atttgccgtt gatgccctcg ataccgtcac caaatccata ggctggctga tccattccgc
     7741 cccagtactc gatgtgataa ccgcgcggaa aatcaagctt tgcattatcg agccaccatg
     7801 gtgtatacac atgcatgccg ccgacgccgt cttcattgta tcgtttccga tcaaacagtt
     7861 caggcaatac acctcccata tctgcacccg ttgaatcgtg aaggtatttc ccgactacat
     7921 tactcgaatt tgccagccca ttcggatgcc tttgcgattt tgagttcaac aaaagccttg
     7981 cgctttcgca tgcgctgccg gcaagtatca ccgtcttgcc ttcaacctgg tattcctgca
     8041 tgtcctcttt gtcgacatac gaaacgccgg tggccaggcc ttcccggttc gttagcactt
     8101 cgcgggccat gcaatttgtg agcaagtcga cattaccggt cttcaatgcg gggataacta
     8161 acacagatga cgaagaaaaa tctgcgtata ctttacaact tcgtccgcat tgcgcacagt
     8221 aaaaacactg gccgcgttcg tcgttgatct tttttgtcag gatagaaagt cgcgaaggga
     8281 tcacaggaat attaatacct gttgcagcct tcttgatcat taattcatgt aagcgcggtt
     8341 tcggtggcgg aagaaagaca ccatcgggat cattgggcaa accttcattc gttccgaata
     8401 caccgatcag gctttccact ttatcataat acggtttcac atcttcgtaa ccgatcggcc
     8461 agtcatcgcc gaggccatcg atactcttcc gtttaaaatc tcgtggccca aaacgaagtg
     8521 tgatccttcc ccaatgattt gtcctcccac cgagcattct tgcacgccac cattcccatt
     8581 tcgtatcgcc gacatgtgtg taaggttcgc cgtcaatatt ccatccccaa tagcatccgt
     8641 caaaatcgcc gaacggacga aattttgtgc tttttccacg ccgcggagat gcccatggtg
     8701 gttgcatctg gttggaattc ttagcgggat catacatcgg ccctgcttct atcaggcaga
     8761 cttttagacc ggctttcgcc aacacataag ttgccatgcc tccgcctgcg cctgaaccaa
     8821 taatgaccgc gtcgtacttc tttggatttt ttttgatctg aagtgtgccc atcctcgttt
     8881 ttgttgaacg gctaaaataa gaattatcaa tttggcatca gcagtttttt tgtcagtgca
     8941 ggtgagtgaa aaaagtgatc aatgcgctca attttgtctc tccttcatct tatcgggtcg
     9001 tatcttacaa cgaagttttt aagggatgaa tttaattgct attgatatag gcactacaca
     9061 ttgcaaggca gttattataa acgaaaaagc gcgcgtttta aaaacctttc aatcaaccaa
     9121 caaaacaatt acgccacgac ccggatcgaa cgaacaggat gcaggagcaa tatttgatga
     9181 tgtcgccgga ttgctttgtg actcatttgc attttgcgaa cagaaaaata ttggttgcgt
     9241 ttcattcagc gctgcgatgc atagtttgat cgtggttaac aaagatggta agccgttgac
     9301 gaacatgctt acatgggccg acctccgcag cgcttcttac gcacatgaat taaaagtaaa
     9361 ccctgcagca caaaagatat atgaaaccac cggtgtgccg ttgcatgcca tgtctccttt
     9421 gtgcaaaata atctggctgc gaaatgaagc ggcagaagtt ttcttgaacg ccttcaaatt
     9481 tatttccatc aaggaatatg ttttcttcag gcttttcgga aaatatattg ttgatcattc
     9541 gatcgctgca gcaacggggc tgttagatga aaaaaaatta gactggcatg atgaggcctt
     9601 gcaactggcc gggataaatc gctcacaact ttctgcattg tgcccggtag ggcactatga
     9661 aactgaattg ttgcctccag ttcaaaagca attacaaatt gaaaatacca ttccttttgt
     9721 attgggcgga agtgatggcg cgctggcgaa tttaggctgc ggcgcgattg atgcgggcag
     9781 ctcggcaatg accatcggca ccagcggagc gatccgtgtg atcactgaaa aatattcgcc
     9841 ggacaagaaa caaaggttgt tttcttatta tctcacggac ggtatgtatc tcaccggcgg
     9901 ggcaattaac aacggcggaa atgtggtgaa gtggtttgga gaaaatgtct tgcacgaaaa
     9961 tcttgacagc gaagaaacat ttcaatcgct gttgcacgat gcgatgcttc tcagagccgg
    10021 tgccgaaggg cttctttttt tgccgtacat atccggtgaa agatcgcccg tgtgggacga
    10081 gaatgcaaga ggagcgtttg tcggattgac ttccgcccat acgcgggctc acttaacgcg
    10141 ggctgtgatc gaaggaattt cgtttgcgtt gttcgatgtg cttaaagctg ttgaggaaac
    10201 aattggtgcg atagaaacga tctatttaag cggaggtgtt atcaagtcgg atgcatggat
    10261 gcagttgctt gccgatatta cccggaaaaa agtaattgtg agcgacgctg cggatgcatc
    10321 cgctttgggc gcagcgttta ttggcatgaa agcgattgga attttggacg atctcaaaaa
    10381 tgtaaggcga ttcttacatg aggtaaagac atttctgccc aatcttgaac aagccgatcg
    10441 ttacagcaaa tattttgaat tgtaccgcac gctgtacctg caactaaagg caacatttga
    10501 aacgataact aaaattcaag attgctaacc ccgagtttca acgcaactta tctgccgaac
    10561 cggatccttc cttttggata aacaccattt ttcccaagcg cttcttctat ccggagcaac
    10621 tgattgtatt tggccacgcg gtctgtgcgt gaagcagaac cggttttgat ctgtccgcaa
    10681 tttaatgcca ctgcgaggtc tgcaattgtt gtatcttctg tctcaccact gcggtggctc
    10741 atgattgttg tgtatccgtt cgtttgcgct aattgaacgg cgttgatggt ttcagttacg
    10801 gtgccgatct ggttcacctt gatcaaaatg ctgtttgcaa ttccattggt aataccacgc
    10861 tgcaaaattt ttgtattggt gacaaacaaa tcatctccta cgagctgcac tttatgtccg
    10921 agggcatcgg tcaatttttt ccagccgtcc caatcttctt ccgccatgcc gtcttcaatt
    10981 gaaatgatcg ggtatttgct cacccagttc gtccagtact caaccatttc atcgctgcta
    11041 atgatctt
//
LOCUS       DASQJI010000800         3439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1198803,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000800 DASQJI010000000
VERSION     DASQJI010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3439
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1198803"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..1998
                     /locus_tag="VEV83_21100"
     CDS             130..1998
                     /locus_tag="VEV83_21100"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47695.1"
                     /translation="MKKISTIPIAVFILFLVMHAAAQSPGSATSIKAGKVINLGELAK
                     KELLQPPAVVQRDYEEKDDELSGIPTKKLVPTDAKLYQVMADYVTNISASSQLPQTAS
                     PAPIRSFDGLLDNNAIIPPDLGGAAGPNHLFETLNSQYRIYNKTGGTVATISLNSFWS
                     GLSGTGFGPFSDPHVVFDSASGRWLACIMGAKTSSGPYAIFLAVSLTNDPTGSWYEYS
                     LATGSSAFLPDYPLLGYNKSWIVITTNDFKNSSFLRTRIIVYNKSKALAGTLTSATQF
                     FDSTGTFTLSPAETLDPLEKKEYFLTDYNGNSGGNGYVQVCTISGKAGSPVYKLGPIV
                     GVNSPWSETSLDAPQLGVSKKIYTGATKMRTVIVRNGSIWATHTVYLPAMTPTHSSTD
                     FWQIRTSDNAVLQYGLIDDPTAALWTSYPSLAVTPHNDVLIGSTMVGSAIYASAVYSY
                     RNGTDASNTFRSVYTYQAGGNSYYKTFGGTRNRWGDFSSTSLDPLNGTFWTLQEYALP
                     TVNTWGTTWANVDHPLTPVAINNSSVALNTGNNLTVMPNPGKGYFTLNYQSTRQGEAV
                     ITVYNLTGNIVYNNKVSVSQGLNRINMDISNAGNGTYKLTIQNGGQVKQTEFVISK"
     gene            2138..2803
                     /locus_tag="VEV83_21105"
     CDS             2138..2803
                     /locus_tag="VEV83_21105"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HYK47696.1"
                     /translation="MAQASTTQNELSQAEKDKGWKLLFDGKTLNGWRTYKNAAGSWEV
                     KDGALCSERSASNTHADLITNEMYGNFELSIDWKISPKGNSGIMYLVTEQHENTYESG
                     PEYQLIDDNGFPEKIEDYQKTGANYAMQAPAANAANPPGEWNHTVIIVNKGHVEHWLN
                     GKKLLEYQIGSDEWNKQKEAGKWKTESGYGAAASGHIALQAAHSEVDKTYICFRNIKI
                     KLL"
BASE COUNT         1062 a          754 c          756 g          867 t
ORIGIN      
        1 ggtttttgtt tttgcatacg gggactccac aaaatacgtc ttttgataca tgatcaattc
       61 gcaatgcctg tcgaaaaaaa actttgcatc tcgtaaaaag ccataaatta acaccataaa
      121 ttaaacacta tgaagaaaat ctctactatt ccaattgcag tatttatcct tttcctcgtt
      181 atgcatgcgg cggctcagag cccgggtagt gcaacaagca tcaaagcggg aaaagtcatc
      241 aatttgggtg agctcgcaaa aaaagaattg ctccagcctc cggcggtcgt tcagcgcgac
      301 tacgaagaaa aagatgatga gcttagcggc atcccaacga aaaaattagt gccaaccgat
      361 gcgaaattgt accaggtgat ggccgattat gttacaaaca tcagcgcatc ttcccaatta
      421 ccacaaactg cttcgcccgc acccattcga tctttcgacg gacttctcga caacaatgcg
      481 ataattccgc cagacctggg cggcgctgcg ggaccgaatc atttatttga aacactcaat
      541 tcgcaatacc gtatctataa caaaaccggg ggaactgtcg caacgatcag tttgaacagc
      601 ttttggtcgg gattaagtgg gacagggttt ggtccgtttt ccgatccgca tgttgtgttt
      661 gattctgcaa gcggcagatg gctggcttgt atcatggggg cgaaaacatc ctcaggtcct
      721 tacgcaattt ttttggcagt ttcacttact aatgacccca cgggaagttg gtatgaatat
      781 tctcttgcta ccgggtcttc tgctttttta cctgattacc ctctgcttgg atataataaa
      841 agctggatcg tgatcaccac gaatgatttt aaaaattcgt cattcctcag aacgagaata
      901 atcgtgtata ataagagcaa agccctggcc ggaactttaa cctcagcaac acaatttttt
      961 gattccaccg gcacattcac actttcccct gctgaaactc ttgatcccct cgaaaaaaaa
     1021 gaatatttct taactgatta caatggtaat tctgggggca acggttacgt gcaggtttgc
     1081 acgatttccg gtaaggcagg gagccctgta tataagctcg gcccgattgt cggggtgaac
     1141 agtccatggt cagaaacgag ccttgatgct ccccagctcg gagttagcaa aaaaatatac
     1201 actggtgcaa ctaaaatgag aactgtaata gtgagaaatg gctctatttg ggcgacccat
     1261 accgtatacc tgcccgcgat gacgcctacc cactcctcaa cagacttctg gcaaataaga
     1321 accagtgaca atgcggtgtt gcaatatggc ctgatcgatg atccgactgc tgcattgtgg
     1381 acgtcgtacc caagtttagc agtgacacct cataacgatg tgcttatcgg atcgacgatg
     1441 gtagggtctg cgatctatgc aagcgccgtt tattcatatc gtaatggaac tgatgcatcg
     1501 aatacattcc gcagcgtgta tacataccag gctggcggaa attcatacta taaaactttc
     1561 ggcggcacgc gtaatcgttg gggcgatttc tcatctacgt cgctcgaccc attaaacggc
     1621 acgttctgga cactgcagga atatgcgcta ccgaccgtaa acacatgggg aaccacctgg
     1681 gccaacgtcg accatcctct tactcctgtt gcaataaata attcgagcgt tgcattaaat
     1741 acaggtaaca acttaacggt gatgccaaat cccggaaagg gatacttcac gctgaactac
     1801 caatcaacaa gacaggggga agcggtgatc accgtatata atttgacagg aaacattgtt
     1861 tacaacaata aggtttcagt ctcacaagga ctgaacagga tcaacatgga tatttctaac
     1921 gcgggcaacg gcacttacaa actgacgatc caaaacggtg gtcaggtgaa gcaaacagaa
     1981 ttcgtcatct cgaaataagg acacccaatt gcggagcagc tctttcttga aaacgaatat
     2041 ctttaattaa acaagaaata acatgagaaa gaaggtttat ttggcaccct gttgcatttt
     2101 gattcttagt ttttctatcg gcgtcaaaaa ttctattatg gcacaagcgt ccacaacaca
     2161 aaatgaactt agccaggccg aaaaagacaa gggctggaaa ctattgtttg acggcaaaac
     2221 gctcaacggt tggagaacat ataagaacgc cgccggctca tgggaagtta aggatggtgc
     2281 attatgcagt gagcgttcag catctaacac acatgcggac cttattacaa acgagatgta
     2341 tggaaacttc gagttgtcga tcgattggaa aatatctcct aaagggaaca gcggcatcat
     2401 gtacctggta acagagcaac acgaaaacac gtatgagagc ggcccggaat accagttaat
     2461 tgacgacaat ggtttccccg aaaaaattga agactatcaa aagacggggg caaactatgc
     2521 gatgcaggcg ccggcagcaa atgcagcgaa tccacccggt gaatggaatc atacggtgat
     2581 cattgtgaac aaaggacacg ttgaacattg gttgaatggc aagaaacttt tggagtacca
     2641 gatcggaagc gacgagtgga acaaacaaaa agaagcgggt aaatggaaaa cggaatccgg
     2701 ctatggcgct gcagccagcg gtcacatagc gttgcaggct gcacacagcg aagttgataa
     2761 aacttacatc tgctttagaa atatcaagat taagctattg tagccgcgcg taatgcagca
     2821 cgaaattttc ggtagaaatt agtgtgtcaa ttatttttta ccaggttaaa tttttatgcc
     2881 cattttacct gtaagagcgg agaaaaaacc gctaagtttt gaggcaagca aaaagtttat
     2941 ttggtaagcg aaggcacagc cgcagcttct aatgactatg ccacaaaacc gaacgacttt
     3001 tgcggcgcag agtgtcgaaa tcccttttga gaaaaccgga ggttatgcag atcgaatcca
     3061 acaatttttg tgactgtaca agagttgcat aaccaagcca tcgataaatg aaagtcgtca
     3121 cccgaaaagg ccattatgct ttacacgatt tcattctgaa tctttgttat tgaaaatagt
     3181 ttttctaact tggtgtcaaa tttagacgtt aagctaacga cgcgagattt cgtgtgaaac
     3241 attttgccaa tttcactgtg aattgaaaaa cgtttctaac aagtcttaaa ttcaactgat
     3301 tacataactg acaaaaaaat taaccatgaa acatttatta ctcgcaatct tttgcttttc
     3361 attttcagca acgatctctg cacaaaaagt tgacacagtt ctggaggagc aatggaaaaa
     3421 taatgcctgg caaaatgct
//
LOCUS       DASQJI010000801         4319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3041991,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000801 DASQJI010000000
VERSION     DASQJI010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3041991"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VEV83_21110"
     CDS             complement(<1..575)
                     /locus_tag="VEV83_21110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47697.1"
                     /translation="MKQIFIALGLFACITSCKKDPVVNSTSSSPGIGALASGIITTPA
                     THFDSLFTRYNAGQWTGGDVASSYKLPDGRSFWLFGDSFVDTVYPDRHRPFDAFIHNS
                     IVLTDASANFITTLYGGTANKPKPFFDAVEPKQYWPNSAFSSKDQTQLFVLMSTIRAT
                     GEGGLFGFELTGNSVGVLSLPDCKLVKITDIS"
     gene            complement(602..1351)
                     /locus_tag="VEV83_21115"
     CDS             complement(602..1351)
                     /locus_tag="VEV83_21115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYK47698.1"
                     /translation="MKNVLFVFLVVTCIKTSAQSSFMDYQRNFPRVADALNRKADTLK
                     KQFAAAGLQWPAREIYIRSFKFDSQLEVWVRNNSNEAFKLFKTYSVCALAGTLGPKRF
                     QGDYQVPEGFYYINEFKPNSNYHMSLGINYPNPSDKILNADDPGGDIYIHGSCVTVGC
                     IPIQDPQIEELYILAMSAKSSGQDFIPVHIFPIRFNNPKSVAYFDRTTKDDTSVQQFA
                     AKLKIVYDYFEKEKKLPIISINSKGAYEIMN"
     gene            complement(1556..2686)
                     /gene="hppD"
                     /locus_tag="VEV83_21120"
     CDS             complement(1556..2686)
                     /gene="hppD"
                     /locus_tag="VEV83_21120"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HYK47699.1"
                     /translation="MDTIIANRQTTSASTDFLPLQGTDFIEFYVGNAKQAAHFYKSAF
                     GFQSLAYAGPETGIRDKASYAVRQNKATFVFTTPLRSNNKIAEHIYTHGDGVKALALR
                     VDDATDAWAQTTARGGTSCMKPITLHDEYGEVVVSGIRAYGDTVHLFVERKNYDGPFM
                     PGFREWESEYNPPSTGLLYVDHCVGNVGWHQMDRWVKFYEEVMGFKNILTFDDNDIST
                     EYSALMSKVMSNGNGFVKFPINEPAEGRKKSQVEEYLEFYDGEGCQHIAMATNDIVET
                     VTQLKSRGVEFLKVPPVYYDDLFSRVGSIDEDIEPLKDLGILVDRDDEGYLLQIFTKP
                     VEDRPTLFFEIIQRKGAKSFGKGNFKALFEAIEREQELRGNL"
     gene            2925..4043
                     /locus_tag="VEV83_21125"
     CDS             2925..4043
                     /locus_tag="VEV83_21125"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HYK47700.1"
                     /translation="MKVGVLGGGQLGRMLLQAAANYVAETFVLENDEHCPAAHLCHHF
                     TKGDIRDFDAVYNFGRSVDAITIEIESVNVEALEKLESEGIKIYPKPSAIRTIKNKIT
                     QKDFYKAGQVPTPEYIVTENLSELQGNVSFLPAVHKIGQGGYDGRGVQIVRSEQDIEK
                     GFDAPAVLEKLVDLKKEVALIVAMNDKNETAIYPPAEMVFDPDLNLLDYQISPAEMPQ
                     QVLWKAEAIARKVVKDLGSPGLFAIELFIDKNDEVFVNETAPRVHNSGHHTIEGNYCS
                     QYDMLWRIILNYPLGNTQAILPSSMVNIVGADGYSGEAKYEGLDEVLQMENVFVHLYG
                     KKQTRPGRKMGHVTILSKDRQDLTYKARKIKNTLKVVS"
BASE COUNT         1257 a          925 c          952 g         1185 t
ORIGIN      
        1 gaaatgtcgg tgatcttaac gagtttgcag tcgggcaaac ttagaacacc tacgctgttg
       61 ccggtaagct caaatccaaa taacccgccc tcaccggttg ccctgatcgt tgacattaac
      121 acaaataact gtgtttgatc tttactgctg aacgcggagt taggccaata ttgttttggt
      181 tctacggcat caaaaaaagg tttcggcttg ttagctgttc caccgtataa agtagtaatg
      241 aagttcgcac ttgcatccgt taacacgatg gaattatgaa tgaaagcatc gaaaggccgg
      301 tgccggtccg gataaaccgt atcaacgaaa gagtcgccaa ataaccagaa agagcgacca
      361 tcgggaagtt tgtacgagga agcaacatcg ccacccgtcc attgaccggc attgtaccgg
      421 gtaaataagc tgtcgaagtg agttgccggt gtcgtgatga tgccactggc aagcgcaccg
      481 attccaggtg aagaacttgt tgagttaacg acagggtctt ttttgcatga agtgatacaa
      541 gcgaacagac caagggcaat gaagatttgt ttcatgtaat gttaaatgtc gagcggatgg
      601 gttaattcat tatttcgtaa gcgcctttgg aattgatcga gatgataggc agcttttttt
      661 ctttttcgaa gtagtcataa actattttca gttttgcagc aaattgctga accgaagtat
      721 cgtctttcgt ggtccggtcg aagtaagcca cgctctttgg attgttaaac cggataggaa
      781 aaatatgcac tggaataaaa tcctgcccgc tgctcttagc gctcatcgca agaatataca
      841 gttcctcgat ctgcgggtcc tggatcggaa tgcaaccaac ggttacacaa ctaccgtgga
      901 tgtaaatatc gccgccggga tcatccgcat tcagaatttt gtcggatgga tttggataat
      961 tgatcccaag ggacatatgg taattactgt ttggcttaaa ctcattaata taataaaacc
     1021 cttccggcac ctggtaatcg ccctggaaac gttttggccc taaagttccg gccaatgcgc
     1081 aaacagaata agtcttaaaa agcttgaatg cttcgtttga attattacga acccatactt
     1141 caagctggct gtcaaatttg aacgaacgga tgtaaatttc tctcgcgggc cattgcaaac
     1201 cggctgctgc aaattgtttt tttagggtat ctgctttacg atttaatgca tctgccaccc
     1261 gcggaaaatt tcgttgataa tccatgaagg acgactgagc agaagtcttg atacatgtaa
     1321 ctaccaggaa aacgaagagc acatttttca ttcgcccgaa aatattaaat tctcgtaaac
     1381 ccataccgga gttgctgtta aattcaaaat aataaacgtg aatgaactac acttatttcg
     1441 cggcaaaaac caaaaactgt attcctgttt tggttaggaa catagcatgc gctcgtaatt
     1501 gtcgtgcaaa aaaacaatct tttcggttca gatgcccgga aaattataca caagatcaaa
     1561 gatttccacg caattcctgc tcgcgctcaa tggcctcgaa caaagctttg aaattacctt
     1621 ttccaaagct tttggcacct ttacgctgga tgatctcaaa aaacaaagta ggacggtcct
     1681 ccactggctt tgtgaatatt tgcagcaggt agccttcatc atcacggtcg actaaaattc
     1741 caagatcttt caaaggttcg atatcctcgt ctatgctgcc tacacggcta aataagtcat
     1801 cgtaataaac cggtggaact tttaagaact ccactcccct gcttttgagc tgcgtcacgg
     1861 tttcaacgat atcgtttgtt gccattgcga tatgctggca accttcgccg tcatagaatt
     1921 caaggtattc ctcaacctgc gatttctttc gtccttctgc aggttcattg ataggaaatt
     1981 tcacgaatcc atttccattg ctcataacct tgctcatcaa ggccgaatat tccgtagaaa
     2041 tatcgttatc atcaaacgtc agtatatttt tgaagcccat tacctcttca taaaatttca
     2101 cccaccggtc catctggtgc catcccacat tccccacgca atggtcaaca tataacaatc
     2161 ctgtagaagg cggattgtac tctgattccc attccctgaa tccgggcatg aatggaccgt
     2221 cataattttt tcgttctaca aaaagatgta cagtgtctcc ataagcacgg atgccactca
     2281 caaccacttc gccatactca tcatgaagtg tgatcggctt catgcagcta gtgcctccgc
     2341 gcgcagtagt ttgtgcccat gcatcagtgg cgtcgtctac acgcaaggca agcgccttaa
     2401 cgccatctcc atgcgtataa atatgttctg cgatcttgtt attactgcgg agtggcgttg
     2461 tgaaaacgaa ggtcgctttg ttttgccgca ctgcataact ggccttatcc cgaatgcctg
     2521 tttcgggccc ggcatatgcg aggctttgaa atccaaacgc actcttataa aaatgtgctg
     2581 cctgttttgc atttccaacg tagaattcta taaaatcagt tccctgcaga ggaagaaaat
     2641 cggttgaggc tgaggttgtt tgtcggttcg cgataatcgt atccataaaa aagatttttg
     2701 tcaattggta tttgatgacg tcagcatacg tcatcgataa gagaagtttg ggtgcgcatc
     2761 agttgcacca ggatagttac gctgcatcca ttgccagggc ttgcatcagg agagaataat
     2821 taacccgttt atcggaaaat attttatgcg gataatctgg caacatcgct gtacaaaaat
     2881 ataaaatgat tttcgattgt taacttcgcc gcaacttaac tgatatgaaa gttggcgttc
     2941 ttggcggtgg acaattgggc aggatgcttt tgcaggcagc agccaactat gttgcggaaa
     3001 cgtttgtatt ggaaaatgat gaacactgtc ccgcggcgca cttgtgccat cattttacaa
     3061 aaggtgacat aagagatttt gatgccgttt ataatttcgg cagatcggtt gatgctataa
     3121 ctatcgaaat cgaatctgtc aacgttgagg ctctcgaaaa attagagagt gaaggaatta
     3181 aaatttatcc aaagccgtcg gcaataagaa cgatcaagaa caagatcaca caaaaggatt
     3241 tttataaggc cgggcaagtt cccacacctg aatatatcgt gacggagaat ctttctgaac
     3301 tccagggaaa cgtttctttc ttacctgctg tccacaagat cggccagggt ggttatgacg
     3361 gcagaggtgt ccagatcgtg cgaagtgagc aggatattga aaaaggtttc gacgctcctg
     3421 ctgtccttga aaaattagtg gacttaaaaa aagaagtggc attgatcgtt gcgatgaatg
     3481 acaaaaatga aacggcaatt tatcctcctg cggaaatggt gttcgatccg gatctgaatt
     3541 tactcgatta tcaaatttcg cctgccgaaa tgccacaaca agtgctttgg aaagctgagg
     3601 ccattgcacg aaaggtcgtt aaagacctgg gaagccccgg cctctttgca attgaattat
     3661 tcattgataa aaacgatgag gtatttgtaa atgaaacagc gccgcgcgtg cataacagtg
     3721 gccatcatac gatcgagggg aattattgca gccagtatga tatgttgtgg cgaatcattc
     3781 ttaattatcc gcttggcaac acgcaggcaa ttcttccatc ttcgatggtc aatattgtgg
     3841 gtgccgatgg ctacagcggt gaggcaaaat atgaaggcct cgacgaagtg ctgcagatgg
     3901 aaaatgtttt cgtgcatttg tatggaaaaa aacaaacgag gccgggcaga aagatggggc
     3961 atgttaccat actcagcaaa gaccggcagg atcttacata caaagcgcga aaaataaaga
     4021 atacattaaa agtagttagt tagttttcgg tttgttgttt tcagtttatg gcgaccgtaa
     4081 ggaagtttaa agaccttgag gtttggaaga aggccagact tctggcccag aaaattatgc
     4141 tttaactttc aaaaaacgtc ggtcgcaata tctcagctaa aagatctatg tatgccccga
     4201 aacattttct caactttaca acaatacgga cgcgttgcaa ggatcattaa gggtaaccag
     4261 tttaaaagcc gaaataatgt caacaactga aaactcagaa actgaaaagt caaaactcg
//
LOCUS       DASQJI010000802         2789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_123761,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000802 DASQJI010000000
VERSION     DASQJI010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123761"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VEV83_21130"
     CDS             complement(<1..471)
                     /locus_tag="VEV83_21130"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HYK47701.1"
                     /translation="MDTVNLKVEGMSCTNCALTIHKYLEQQGLQNVKVNFAAGNVTFD
                     PNNHISVQQLEKGIARLGYHVVSDEQVSKKPRFLKNNFHRFLFCLVFFAPLILHMTGI
                     HIHWLMNPYAQLALTIPVYATGMFYFGTSAWRSVLKGIPNMNVLIALGATASFVY"
     gene            586..1623
                     /locus_tag="VEV83_21135"
     CDS             586..1623
                     /locus_tag="VEV83_21135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HYK47702.1"
                     /translation="MRYYLIMCLLLCAPILSHAQTNNPAAKKYVLVIHGGAGTILKSK
                     MTPEKEQLYKQGLQRALNAGSEVLKNGGNALDAVEATIRILEDDSLFNAGKGAVFTNE
                     GRNELDASIMDGKTLKAGAVAGITNIKNPITAARAVMDKSEHVMMAGKGAELFAAKNG
                     CTVVDPSYFFTTQRWLDLLDAKKEDSLKMLHEDSSKAFLKQPDNYDYKYGTVGAVALD
                     TYGNLAAATSTGGMTNKKFGRVGDSPIIGAGTYADNNTCAVSCTGWGEFFIRLSIAKS
                     VADRMELAHMSVQDAANEMIMKKLPALGGDGGLIAVDKNGNFVMSFNTEGMYRGYVRS
                     DGDSKIEIYKD"
     gene            complement(1670..2512)
                     /locus_tag="VEV83_21140"
     CDS             complement(1670..2512)
                     /locus_tag="VEV83_21140"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HYK47703.1"
                     /translation="MRNRIFHVSAAALLCLHVFSQPKGNLFIIGGGSRSDELMHSLVS
                     TAQLRTNDYIVVLPMATTEPDTSFYYISEDLEKVCSNKIVSFNFTQRDVNKKQWLDSV
                     QNAKLIFITGGDQIRFMNVVLNTPIQAAIQKAYDDGATVAGTSAGAAVMSYYMVTGNQ
                     LLGDTTYESTFPKLWYNNVEITQGLGLVDSAIIDQHFIARSRYNRMLSAVAQFPTLPC
                     IGIDEGTAVIIHANNVKVAGTSQVIVFSHPQNLRVTDKGYIKFDDIEMRIYTAGDEFA
                     IKAP"
     gene            complement(2523..>2789)
                     /locus_tag="VEV83_21145"
     CDS             complement(2523..>2789)
                     /locus_tag="VEV83_21145"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK47704.1"
                     /translation="VGATPFEDIETIRARSGLSTTQSYITLNNIIMERHLEIAHEGER
                     IHDVKRLRQSVDGYDYDANELVLPIPINQIIIVGKDILKQNDGY"
BASE COUNT          785 a          593 c          657 g          754 t
ORIGIN      
        1 gtaaacgaat gaagcggtcg cacctagcgc gatcagcaca ttcatgttcg gaattccctt
       61 tagcacgctt ctccacgcgc ttgttccaaa gtaaaacatg ccggtggcat aaaccgggat
      121 cgttaatgca agctgtgcat acgggttcat taaccaatga atgtggatgc ctgtcatgtg
      181 gaggatcagc ggtgcgaaaa acacaagaca gaaaaggaag cggtgaaaat tgttcttcaa
      241 gaaccgcggt ttctttgaca cttgttcatc gctgacgacg tgatatccta agcgtgcaat
      301 gcctttttcc agttgttgaa cggaaatatg gttgttggga tcaaatgtca cattgccggc
      361 tgcaaaattc acttttacat tttgcagtcc ctgttgttcg agatatttgt ggatcgttaa
      421 agcgcaattt gtgcaactca tcccttcaac ctttaaattc acagtatcca taataacacc
      481 gccgtatttt tttgcaaatt tacaagccct gcggctgtaa ataaagctca ttgacgccac
      541 accatacatt ttaacagcta actttagaac gtaaattttg ttgtcatgag atactatttg
      601 atcatgtgtc ttcttctctg tgcgccgata ttgagccatg cacaaacaaa caacccagcc
      661 gccaaaaaat atgtgctcgt gatccacggc ggtgcaggca ctattttgaa aagcaagatg
      721 acgccggaaa aagagcaatt gtataaacaa ggattgcaaa gggcgttaaa tgccggcagt
      781 gaagttttga aaaatggtgg caatgcactt gatgccgtgg aggcaacgat caggatactg
      841 gaagatgatt cgttatttaa tgcaggcaag ggcgcggtgt tcacaaacga agggcgtaac
      901 gaactggatg cgtctatcat ggatggaaag actttaaagg cgggcgccgt tgccgggata
      961 acaaatatta aaaacccgat cacagctgca agagcggtaa tggataaaag tgagcatgtg
     1021 atgatggccg gaaagggcgc ggaactgttt gctgcgaaaa atggttgcac ggtggtcgac
     1081 ccttcttatt tcttcaccac gcaacgttgg ctcgacctcc ttgacgcgaa aaaggaagac
     1141 tcgcttaaga tgttacatga agattcgtcg aaagcttttt taaagcaacc ggataattac
     1201 gattataaat acgggacggt tggagcggtg gcgttggaca cttacggaaa tcttgccgca
     1261 gcaacaagta ctggcggtat gacaaataaa aagtttggaa gggtaggaga ttcacccatt
     1321 attggcgcgg gaacatatgc agataacaac acgtgtgctg tcagttgcac agggtggggt
     1381 gaatttttta taagattatc gatcgcgaag agcgtagccg accgaatgga acttgcacac
     1441 atgagcgtgc aggatgccgc caacgaaatg atcatgaaaa aacttcctgc gctcggtggt
     1501 gacggtgggc tgatcgcagt tgataagaat ggaaatttcg taatgtcgtt taacaccgaa
     1561 ggaatgtatc gcgggtacgt aagatcagac ggagacagca agatcgagat atataaggat
     1621 tgacgacgtt tcttcataac ccaggatctt tcgcgacgct taaactcctt tagggggctt
     1681 taattgcaaa ctcatctcca gctgtataga tgcgcatctc aatatcatca aacttgatat
     1741 agcccttatc ggttacccgc aaattttgtg gatgtgagaa aacgatcacc tggctcgtgc
     1801 cggcaacttt tacattgttg gcgtggataa taaccgccgt tccttcatca atccctatgc
     1861 atggaagcgt tgggaactgc gcaactgccg agagcatacg attataacga cttctggcaa
     1921 taaaatgctg atcgatgata gcggaatcaa ccaggccaag cccttgtgtg atctcaacat
     1981 tgttgtacca aagtttcgga aaagttgatt cgtaagtcgt gtctccgagt agctggttgc
     2041 cggttaccat gtagtaactc atcacggcgg caccagcgct tgttccggca acggtggcac
     2101 catcatcata agctttttga atcgccgcct ggattggagt attcagcaca acattcatga
     2161 agcggatttg atcccctcct gtaataaaga tcagtttcgc attttgtacg gagtcaagcc
     2221 actgtttttt gttgacatcc cgttgggtaa aattgaaact tacgattttg ttgctgcaga
     2281 ctttttcgag gtcttcggaa atataataaa atgaagtgtc cggctctgtc gtagccattg
     2341 gtagtacaac tatataatca ttggtgcgca actgcgctgt gctcactaaa gaatgcatta
     2401 actcatcaga tcgtgagccc ccgcctatga taaacaaatt tcctttcggc tggctgaaaa
     2461 catgtaagca cagcaatgcc gctgcgctta catgaaaaat tctatttctc atcgaataat
     2521 ttttaatacc cgtcgttctg ttttaatatg tcctttccta cgataatgat ctggttaata
     2581 ggaataggta ataccaattc gtttgcatcg taatcgtaac catccacaga ttgtcttagc
     2641 ctttttacat catgaatgcg ttcgccttca tgcgcgatct cgagatgcct ctccatgata
     2701 atattgttca gcgtaatata agattgagtc gtggaaagtc cggaacgggc tctgatcgtt
     2761 tcaatatctt caaatggggt ggcacccac
//
LOCUS       DASQJI010000803         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_432817,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000803 DASQJI010000000
VERSION     DASQJI010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432817"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1978
                     /locus_tag="VEV83_21150"
     CDS             <1..1978
                     /locus_tag="VEV83_21150"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Plug domain-containing protein"
                     /protein_id="HYK47705.1"
                     /translation="ESLYLRKFQASIARNDKLRPMVQFFPERLTGIAGVISTGVIQIQ
                     NANGSPLSVKGELATANDSVITTFTTNTFGLARLTFVDDPKETYTAIFFLNNDTIRYQ
                     LPAINSSSIQLSLRNQTAKTIKAFVTVEDSLPVSTHTTVLALHRDSLLYAAIGMGSYG
                     ITIPIENFPTGIVQLLLFDDNKKVINERKFYIPPKNSTVTVITDKKTYAAKENVNVRV
                     KVSSTEGKPIMSVLNIAVEDESIQELSDSMEATSLPPLDGLLCETWLDRYHEKYSGEE
                     IDEFMATRRSASADTSETSSTNGYGDDKALENLTGTITNKKGNGISGRIITAFARNTR
                     QFFTDVDTTDANGRFSLSLPQGFDSLQLALQVTDKRLVQTIADSIKIDSFHFPHIPTP
                     LFLKQRFLADNMKALASLRAFHMDASTVFNGEGWLRPVTVSTVQKEQLNYDASRRLST
                     ISQILTSDKFRYGGYNALGNAILLVPGVTLSFGDIAIFGPNINFRGHFGQPLIIMDGC
                     EVPPGDLVINFLNGLNPADIDFIEVLRGAEAAQFGLRGGNGVISINTRHGDGNTTFRN
                     NKFPTFEPVTYHVSPRFQMPDYSVKEVKNASNPDPRTTIFWNANIVTDANGEANINFY
                     TADKAANYTITVTGLTENGQLVYKRITISNVGKK"
     gene            complement(2189..2344)
                     /locus_tag="VEV83_21155"
     CDS             complement(2189..2344)
                     /locus_tag="VEV83_21155"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HYK47706.1"
                     /translation="MNQLVKRTVYDTLPVTVEYSMTNYGKSLEKVIEELAKWGMQHRK
                     RILGKSK"
BASE COUNT          675 a          508 c          524 g          650 t
ORIGIN      
        1 cgaaagcttg tacttaagaa aattccaggc cagcatcgca aggaacgata agctgcggcc
       61 gatggttcaa ttttttccgg aacggttaac tggaattgcc ggagttattt ctaccggcgt
      121 cattcaaata cagaacgcta atggcagtcc cttgtctgtg aaaggcgagc ttgcaactgc
      181 gaatgactct gtgataacca cttttaccac gaacactttt gggcttgcgc gactaacatt
      241 tgtcgatgat ccgaaagaaa cttataccgc gattttcttt ttgaataatg atacgatcag
      301 gtatcaactg cccgcaataa attcatcgtc gattcagctt tcgctccgga atcaaaccgc
      361 taagacgatc aaagcatttg taaccgttga agattcttta ccggtttcca cgcacacaac
      421 tgttttggcg ctgcatcgcg acagcctttt gtatgcggct atagggatgg gcagctacgg
      481 aattacgata cctatcgaga attttccaac aggaatcgtt caattgctat tgtttgatga
      541 caataaaaag gtcattaacg agcgaaaatt ttatatccct ccgaaaaatt ccaccgtgac
      601 ggtgataact gataaaaaga catatgctgc aaaggaaaat gtaaacgttc gcgttaaggt
      661 atcatcgacg gaaggaaagc caattatgag tgtattgaac atcgccgtgg aagacgaatc
      721 gattcaggaa ctttcggaca gtatggaagc cacaagtctg ccgccgttag acggcttgct
      781 ttgtgaaaca tggttagatc gctatcatga aaaatatagc ggtgaggaaa ttgacgagtt
      841 tatggcaacc agaagatcag cttctgctga tacctcggaa acaagttcga ctaatggcta
      901 tggtgacgac aaagcacttg aaaacttaac aggaacaata acaaataaaa aaggcaacgg
      961 gatcagcggc cggatcataa ccgcatttgc gagaaacacc cgccagtttt ttacggatgt
     1021 ggatacaact gatgctaacg gaaggttcag cttatcacta ccgcagggat ttgacagttt
     1081 gcaacttgct ttgcaggtaa ctgataagcg gctggtgcaa acaattgcag atagtattaa
     1141 aattgacagc tttcattttc cgcatattcc aacacctctc tttctcaaac aacggtttct
     1201 tgcagataat atgaaagcgc tcgcttcgtt acgagcattt cacatggatg cttcgaccgt
     1261 attcaacgga gaaggatggt taaggcccgt aactgtaagc acagtacaaa aagaacaact
     1321 aaactatgat gcgtcccgcc gcttaagtac catctcccag atccttacga gtgataaatt
     1381 caggtatggg ggctacaatg cattagggaa tgcaattctg ctggtgccgg gcgtaacatt
     1441 gtcgtttgga gatattgcca tctttggacc gaacattaat tttcgcggac attttggaca
     1501 gccgctgata attatggacg ggtgcgaggt acctcccggc gacctcgtga taaatttttt
     1561 gaacggtttg aatcccgcgg atatagattt tattgaagtg ctgcgaggcg cggaggccgc
     1621 ccagtttgga ctgcgcggtg gcaatggtgt gatttcaatt aatacgcgcc acggtgacgg
     1681 aaataccact tttcgcaaca ataaatttcc aaccttcgag cccgtgactt atcacgtctc
     1741 tcctcgattt cagatgcccg actactcggt taaagaggta aagaatgcat cgaaccctga
     1801 cccacgaacc acaatttttt ggaacgcaaa tattgttact gatgcgaatg gcgaagcgaa
     1861 cataaatttt tacaccgcag ataaggccgc aaattatacg atcacggtca ccggcttgac
     1921 cgaaaacggt caactggttt ataagcgtat caccatcagc aatgtgggca aaaaatagtt
     1981 tcgggctgca tcaatctgat tcgtgttcct ggcagtgcat caataaaatt tttgcccatt
     2041 gcaaaggcct cttgtgttga gggctttttc ttttgtgtta tcagatgatg ttatgattca
     2101 acttctttaa attttgattt cagcaatggt tctgatacag gtggtcttct tcatttaaaa
     2161 agtgagaaga cttctcaatc agcaccattt attttgattt tccaagaatg cgtttacggt
     2221 gctgcatacc ccatttggcc aactcctcga tgactttttc aagcgattta ccatagttgg
     2281 tcatggaata ttctacagtt accggcagcg tgtcgtaaac tgttcgttta acgagctgat
     2341 tcatttcaag atctcta
//
LOCUS       DASQJI010000804        10759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_584997,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000804 DASQJI010000000
VERSION     DASQJI010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10759
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_584997"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VEV83_21160"
     CDS             complement(<1..965)
                     /locus_tag="VEV83_21160"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK47707.1"
                     /translation="MEQKIKVAHVIRVFSYGGAEILLREFFTNPIFQQAVSSHLYILD
                     HKKLGLVPEVQPHVRKVRHYKISSLIFPFEYIKFLRDITRGKYDIVHMHLPVAGWLTI
                     PAKMFTGKTKFVYSEHNLVTFYAKYNYYLSGLVYRFFDCVIYVSKEVGEVIKKVGNKW
                     FFHAERSVMILNGTDTDKFSNAHRASENILQQFTVGLVARFRPQKRVDRWVEVAYETH
                     KLNPDIKFLMVGDGPDDEMLREKIERLGMNDKIELPGMLSDTLSAFKRMDIFLLTSDF
                     EGLPLALMEAMSTGCVPVVSNVGGIKQLEFDGFGKKFDGFDPKQIA"
     gene            complement(1022..1984)
                     /locus_tag="VEV83_21165"
     CDS             complement(1022..1984)
                     /locus_tag="VEV83_21165"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK47708.1"
                     /translation="MSKAADERYLEKPIIIIGSGRSGTTIISEIIFQHEDLAWHSNYQ
                     ELIPFTPLVNLCRRIFDKSLGGIKRSYTYVGASKNTRQGKRAFAQLFLFNPIERYNFW
                     EHITGARIDFSRGFLLNERATEQEKKKIRSFLAKQVKYQGKKRLIMKFTGPARLEYLT
                     SIFPDAVIVNVIREPVATVRSWLEVGFWQRMGIDKLWWQGAYSPQEIEYAESIKTQPA
                     LITAFQYKKLMETTQYEIEKLGLNVYEGRYEDFVKDPKTFIINLMAFMQLPPSERVNA
                     YLEKMIVMNRNERGSQTSRSDITEEMKENILAITGPYKVDKFTH"
     gene            complement(2001..2915)
                     /locus_tag="VEV83_21170"
     CDS             complement(2001..2915)
                     /locus_tag="VEV83_21170"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK47709.1"
                     /translation="MTDLLKNNEALLKKPIIFIGTGRSGTTVISEIIFQHEDLAWHSN
                     YQELFPKFPAINYLRRAFDNRFWRFIGMNTQNNRSFTNYMLFRPIERYDFWEAVTGDR
                     IDFSRSFLLNEKATSEERNHIRTFFAKIVKFQKRKRLALKITGPARIEYLMSIFPDAQ
                     FVYIQREPVATIRSWMEIHWSENITGQLWWHGAYSKEELQKANELSSNQFLFAAFQYR
                     KLMQTTQQEIEKMHPDIYIGHYEDFVDDPNKFIANMLEYLHLSPSPLLDKFMKKLLIT
                     DRNQRKALSPKTEMSENTKKSIIEIVNS"
     gene            complement(2912..3898)
                     /locus_tag="VEV83_21175"
     CDS             complement(2912..3898)
                     /locus_tag="VEV83_21175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47710.1"
                     /translation="MTKEEIKHITRFAKKFFILLVVLFVCDRLIGTLIERAYNDAPEG
                     DVNTFAHSINNPKEDIYIYGSSRAVHGYDCKVFTDSLGYSCFNNGRENSTILYHNTIL
                     NEMLKKHAPQIVILDVSAKELTWRSAENSKLVLASMILPYVRRDTSFRNIAKELFPEE
                     LRKAEVSKIYAYNSLLLALLLGPDKADKSDIVNGYLPLHGVKEEGTPPELTDENDKTD
                     AMATQDFENFVRVLTQKHIKLYVIQSPLYVKPFTTSVSLEAMKAILKKYNVPFWDYAF
                     DTTFYKREYFYDNIHLNDKGATLFSARIAGDIKKDLEKDKALSVQQKNLANR"
     gene            complement(3917..5338)
                     /locus_tag="VEV83_21180"
     CDS             complement(3917..5338)
                     /locus_tag="VEV83_21180"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HYK47711.1"
                     /translation="MVFNSLQFVGFFIVVTSLFFVLPHKYRWLLLLMASCYFYMAFIP
                     VYILVLVFTIVVDYFAGLLIEKSEGKRRRLFLIMSIVANLGVLSFFKYFNFINDNISA
                     LLGLCNFTNPVPDTNFILPIGLSFHTFQAMSYTIEVYKGNQKAERKFGIYALYVMFYP
                     QLVAGPIERPQNIIHQFYEPKKFEYDRVVAGLKIMLWGYFKKLVVADRLAIYVNAVYA
                     NAYHHSGLTLFIATMFFCVQIYCDFSGYSDIAIGAAKVMGYNLVENFRRPFLSKNFSG
                     LANRWHISLYTWFRDYVYSPLAMKARRNRAKLFAYIGLIFLLSGLWHGANWTYICWGL
                     SLAFCIVVERLFENIVKPQRFLSRRWRGILGTIITFLACVIFSCFFRSQHIADALHIL
                     KAIFTFQPGNLFKGSPPINFYYCVIAMVTLYAVEFFQEYLPQVKLVNNKSVVIRYTGY
                     VLVIMMMLIMGVLNGSQFIYFQF"
     gene            5730..6368
                     /locus_tag="VEV83_21185"
     CDS             5730..6368
                     /locus_tag="VEV83_21185"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HYK47712.1"
                     /translation="MLQQSLREKTAQLAAKRLFDIVVASVLIILFMPFLLLITILIKL
                     TSRGPVLYSSERVGFGGDHFNCYKFRSMVIDHSSKQRDHKAAINGQRLGVLHKRKNDS
                     RITFIGRIIRKTSMDELPQLFNVLAGDMSIIGPRPLVPFMLVPYPEFRDVRSLVRPGI
                     TGLWQIRDREHNTSAEYMISHDTEYIANFSLLLDLKILCDTPLAVISGKGAY"
     gene            6410..7531
                     /locus_tag="VEV83_21190"
     CDS             6410..7531
                     /locus_tag="VEV83_21190"
                     /inference="COORDINATES: protein motif:HMM:NF015247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HYK47713.1"
                     /translation="MLRADFVIVGSGLTGSTIARLLADHEQDVLVIDRKDHIAGNVYD
                     YRHESGAMIHKYGPHYFRCGSEKIWNFLNRFSEFYDWAATLRSKVNGEYLNWPVSQDY
                     IEKIVGKEWDLFKGEASNFEEACLAKMPDKLYQLFIKGYTEKQWGVHAAELDKDLAVR
                     ITINKPNVNTLTPNHRWNALPNNGYTEMVKNMLEGIPVKLHFDYLKNRERVIADKMLI
                     FTGPIDEFFHYKFGKLKYRGQGRRIEYLENVDTFQPCVQVNYPNPDEPRIRTIEWKHL
                     LQPADRSSVTGTVITHETPFTPEEANQYEYPFPDKFNKQLYDEYRREADHLKNTLICG
                     RLGEYRYYDMDQAIGRAMKLTSAILERYNVPSVQYAKAI"
     gene            complement(7535..8569)
                     /locus_tag="VEV83_21195"
     CDS             complement(7535..8569)
                     /locus_tag="VEV83_21195"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK47714.1"
                     /translation="MRRRVKTLCVFISVLLIVFSFSGVNAQNVHDTTTNAENDDEDST
                     LKATALKNFTGVALRDVIYTTKKNVQDVQQPLGMDIYKPPEADGKKFPLVLLIHGGGF
                     KRGTKKPLGIVCAALAERGYVAATIDYRLGWGGTRKVCSADTVQLKQAIYRALQDAHS
                     ALHFLMEHADEYSIDRDSVFIGGGSAGAVTALFTAYLTQQEADVYFTGLSKTMGPLDD
                     STHDVNSAYKLQGIISMWGAYADPQLITSANALPTIFFHGKKDQTVPFNFGPIIPCPD
                     ASVIYGTYPLYNRLKELGITAIAHVDPEGGHGVFSLDFRVANILCFLSDVRAGNKKEI
                     YLEGEQSSCN"
     gene            complement(8631..9443)
                     /locus_tag="VEV83_21200"
     CDS             complement(8631..9443)
                     /locus_tag="VEV83_21200"
                     /inference="COORDINATES: protein motif:HMM:NF016952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminyl-peptide cyclotransferase"
                     /protein_id="HYK47715.1"
                     /translation="MKKIVFAVFLLLLFAACNNHKPTNPVVDSSNPAPPVLNYSVVKV
                     YPHDTSSYTQGLQWLDSSLYEGTGNYGSSKLIKEHITDGKAEKEISLDKSFFGEGITV
                     MNNKIYQLTWKENKVFVYDASTFKKINELTWPFEGWGLTNNGKEIIVSTGSSNLYFVD
                     PETFKIIRQVGVTDNYGPVALLNELEYANGSIYANQYETDYILKINATTGKVEGKMDC
                     SKLLAQSGLNFNPDEYSVNTGYVLNGIAYDSAKNSFYITGKMWPALFEIKLN"
     gene            9662..>10759
                     /locus_tag="VEV83_21205"
     CDS             9662..>10759
                     /locus_tag="VEV83_21205"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47716.1"
                     /translation="MRSQFILLLLLAVSITTTAQRKLSESPSQKLTTEDYDSSTLTTL
                     KWRSIGPWRGGRCLAVTGVLNDPYTYYMGATGGGIWKTTDGGNSWLPISDSAFHSASV
                     GSLAISASDPNIIFAGMGEYAIRNTAIMGDGIYKSIDAGKSWKHVLALDASAVGRILI
                     HPSNPNLVYAAVMGKMFGENKERGVYRSSDGGATWKQILFKNDSTGAIDMRFDPNNPS
                     IIYASLWQVYRNSWSLNDGGQGSGLYKSTDGGDTWQLLSNNPGLPKGILGKMTIAIAE
                     SNSNHVYAMVENKNGGLFSSTDAGKTWTRVSTQNDLTQRPWYFSGVWVDPKNENHVYV
                     MNVQFWQSIDGGKTFTAINQEHGDNHDMWINP"
BASE COUNT         2983 a         2396 c         2311 g         3069 t
ORIGIN      
        1 gcaatttgtt tcggatcaaa tccgtcaaac tttttaccga acccgtcaaa ttctaattgc
       61 ttaatgccgc ccacattgct cacaacgggt acgcagccgg tgctcattgc ttccatcagc
      121 gcaagaggaa gcccttcaaa gtcgctggtg agaagaaaaa tgtccatgcg cttaaaagca
      181 gaaagcgtat ccgataacat tccgggcaat tcgatcttat cgttcatgcc gagtcgctcg
      241 attttttcac gaagcatctc atcatccggg ccgtcgccca ccattaagaa ttttatatcg
      301 ggatttaatt tatgtgtttc gtatgcaact tcaacccatc tgtccacacg tttctgcgga
      361 cgaaaacgcg cgacaagacc tacggtgaat tgttgcaaaa tattttcgct tgcacgatga
      421 gcgttcgaaa atttatctgt gtcggtgcca ttcaatatca tcactgagcg ctcagcatga
      481 aagaaccatt tgttgccaac ttttttgatc acttcgccaa cttccttcga tacgtagatc
      541 acgcaatcaa agaaccggta gaccaggccg gacagataat aattgtattt cgcgtagaag
      601 gttacgaggt tgtgttccga ataaacaaat tttgtttttc ccgtgaacat ttttgccggt
      661 atggtcaacc atcctgcaac aggcaggtgc atatgaacaa tatcatattt acccctggtt
      721 atatcgcgga ggaatttgat gtactcaaag ggaaaaatga gagagctgat cttgtaatgc
      781 cgtactttcc gcacatgagg ctgcacttcc ggaacaagcc cgagcttttt atgatctaag
      841 atgtagaggt gagacgagac agcttgttgg aagatggggt tggtaaaaaa ctcacgcaat
      901 aagatctcag cgcctccata actgaacacg cggatcacat gcgcaacttt tattttttgt
      961 tccatcgttc tttttcgaaa gttgatctgt tgattaaaaa cttcccatga attgaggtac
     1021 tttaatgtgt gaacttatca accttatatg gacccgtaat tgcaaggata ttttctttca
     1081 tctcctctgt gatgtcagac cttgatgttt gtgatccacg ctcattcctg ttcatcacga
     1141 tcattttttc aagatacgcg ttcacgcgtt ccgatggggg cagttgcatg aatgccatca
     1201 ggtttataat aaacgttttt ggatctttta caaagtcttc atacctgccc tcgtacacat
     1261 tcaatccgag cttttcgatt tcgtattgcg ttgtctccat taatttttta tactggaatg
     1321 ctgtgatcaa tgcaggttgc gttttgatcg attcggcata ttcaatttcc tgcggagaat
     1381 acgctccctg ccaccacaat ttatcgatgc ccattcgctg ccagaatccg acttcgagcc
     1441 acgaacggac ggttgccact ggctcacgaa tgacgttcac gatgaccgcg tccggaaaaa
     1501 tgctggttag atattccaac ctcgcgggcc ccgtaaattt catgatgagc cgtttctttc
     1561 cctggtactt cacttgtttt gcgaggaaag agcggatctt ttttttctct tgttcagtgg
     1621 ccctttcatt gagcagaaat cccctggaga aatcaatacg cgcgccggta atgtgttccc
     1681 aaaagttata acgttcgata ggattgaaca ggaacaattg agcaaaagcc ctttttccct
     1741 gccttgtgtt cttactcgcg ccaacatacg tgtacgatct tttgattccc cccaagctct
     1801 tatcaaaaat ccttctgcac aagttgacaa gtggtgtaaa aggaattaac tcctggtagt
     1861 ttgaatgcca cgccaggtct tcatgctgaa agattatttc tgaaatgatc gttgtaccgg
     1921 agcggccgct gccaatgatg atgattggtt tctcgaggta tcgttcatca gccgctttgc
     1981 tcattacaat atttttacgt tcagctgttc acaatttcga tgatgctttt tttggtgttt
     2041 tcagacatct ctgtttttgg tgacaacgct tttcgctgat tgcggtctgt gatcaaaagt
     2101 tttttcatga atttgtcaag caggggagat ggcgacaaat gaagatactc gagcatgttg
     2161 gcgatgaatt tatttggatc gtcgacgaaa tcctcataat ggccaatata aatgtcaggg
     2221 tgcatttttt ctatttcctg ctgcgttgtc tgcatcagct tccggtattg aaacgctgcg
     2281 aacaaaaatt gatttgagga caattcattt gctttctgca attcttcttt tgaatatgcg
     2341 ccgtgccacc ataactggcc ggttatgttt tcgctccagt gaatttccat ccatgaacga
     2401 atggttgcaa ccggctcccg ctggatgtac acaaactggg cgtcggggaa tatgctcatc
     2461 aaatattcga tgcgggccgg gccggttatc ttgagcgcca atcgttttcg cttttgaaat
     2521 ttcacaattt tcgcgaagaa tgtacgaatg tggtttcttt cttcggacgt tgctttttcg
     2581 ttcaacaaaa agctccttga gaaatcgatc cggtcacctg ttactgcttc ccaaaaatca
     2641 tatctttcta taggccggaa caacatgtag ttggtgaatg agcggttgtt ttgagtattc
     2701 attccgatga aacgccagaa cctgttgtca aaagcgcggc gcaggtaatt tatcgcgggg
     2761 aacttaggaa aaagctcctg gtaattggaa tgccacgcaa ggtcttcatg ctgaaaaatg
     2821 atttcagata tcaccgtggt gccggagcgg ccggtgccga taaatatgat cggctttttt
     2881 agcagggctt cattattttt caaaagatct gtcatcggtt agcgaggttt ttttgctgaa
     2941 cagaaagcgc tttatctttt tcaagatctt tcttgatatc gccggcgatc ctggcggaaa
     3001 agagtgttgc gcctttgtca ttcaaatgaa tattatcata aaaatattcc cttttataaa
     3061 atgtggtgtc gaaagcataa tcccagaagg gaacattata tttttttagg atcgccttca
     3121 tcgcttccaa tgacaccgat gtagtaaacg gttttacata caatggcgac tggatcacat
     3181 acaacttgat atgcttttga gtaagaaccc tcacgaagtt ttcaaaatcc tgggttgcca
     3241 ttgcatcggt tttgtcgttt tcatctgtaa gttcaggcgg cgtaccttct tcctttacgc
     3301 cgtgtaatgg caaatagcca tttacgatgt ccgacttatc cgccttgtca ggacccaaaa
     3361 gtaaagccag tagcagcgag ttatatgcat aaatttttga gacctctgcc tttcttaatt
     3421 cttcgggaaa aagttccttc gcaatatttc tgaaactggt atcgcgccga acgtaaggta
     3481 agatcatgga ggctaaaaca agtttgctgt tttctgctga ccgccacgtt aattctttag
     3541 cagaaacgtc gagtatcacg atctgtggtg catgtttctt cagcatttca ttgagaatgg
     3601 tattgtgata caggatcgtg gaattctctc ttccgttatt gaagcatgaa tatcccagtg
     3661 agtcggtaaa gaccttgcaa tcgtagccat gcactgcacg cgaacttcca taaatgtaga
     3721 tgtcttcttt aggattgttg atgctgtgcg caaacgtgtt cacgtctcct tccggtgcat
     3781 cattgtacgc tctttcgatc aaggttccta ttaacctgtc gcaaacaaaa agaaccacga
     3841 gcaggataaa aaactttttt gcaaaccgtg ttatgtgctt tatctcttct tttgtcatta
     3901 tcagtacaac ggttaatcaa aactggaaat atatgaactg gctgccattt aatacaccca
     3961 ttatcagcat catcatgatc accagtacat agcctgtata acgaatcacc accgatttat
     4021 tgtttaccaa cttaacctgg ggcaggtatt cctggaagaa ttcgactgcg tacaacgtaa
     4081 ccatcgcgat cacgcagtaa taaaagttga tgggcggact tcctttaaac aaattccccg
     4141 gctgaaatgt aaagatagcc tttagaatat gcaaggcatc ggcgatgtgt tgggaccgga
     4201 agaaacaaga gaaaatgaca cacgccaaaa aagtgatgat cgtcccgaga attccccgcc
     4261 accgcctgct gagaaatctt tgaggcttca cgatattttc aaacaagcgt tccaccacaa
     4321 tgcaaaaggc gagcgataaa ccccagcaaa tgtatgtcca gttcgcaccg tgccataatc
     4381 cgctaagcag gaatattaat ccgatgtatg caaataattt tgcgcggttt cttcgcgctt
     4441 tcattgcgag gggcgaatac acgtaatcgc gaaaccaggt gtacagcgaa atatgccatc
     4501 ggtttgcgag gccggaaaaa tttttggata gaaaaggtct cctgaaattt tccacgaggt
     4561 tatagcccat cacctttgct gcgccgatcg caatatcaga gtagccggaa aaatcgcaat
     4621 atatctgcac gcaaaagaac atcgttgcaa tgaacaatgt gagcccactg tggtgatagg
     4681 catttgcata aactgcattc acataaattg ccagcctgtc tgccactacc agttttttga
     4741 agtatcccca taacatgatc tttaaaccag cgaccacccg gtcgtattca aacttttttg
     4801 gttcgtagaa ctggtgtatt atattttgcg gccgttctat cggcccggct acgagctggg
     4861 gataaaacat cacatacaac gcataaattc caaacttacg ctctgccttt tggttccctt
     4921 tataaacctc gatcgtataa ctcattgcct ggaacgtatg aaacgacaaa ccgatcggca
     4981 ggataaaatt tgtgtcggga acagggtttg taaaattgca aaggccgagc agggcgctta
     5041 tattgtcgtt tatgaaattg aaatatttga aaaaactcag aacccccagg ttcgcaacga
     5101 tactcatgat aagaaatagc ctccgccgct tgccttcgct cttttcgatg agaagaccgg
     5161 cgaaataatc taccactatc gtaaaaacga gcaccagtat gtaaaccggg ataaatgcca
     5221 tgtagaaata acaactggcc atcaacagaa ggagccagcg gtatttgtgc ggcaggacga
     5281 aaaacaaaga agttactacg atgaagaaac cgacaaactg cagtgaatta aaaaccatag
     5341 attagtccgt ttacacgggg cgcaatgata agattatttc cacaaatctt ctgtacgcca
     5401 gttgctttaa tttgacgccg ttgctacgtg cggtatagcg tgccaaataa gactgccgca
     5461 tgcatcgaag atttttatga gcgaaaaggt aaagtttaca tgtataatac gtataatgtt
     5521 aaaggaggtc gcgcataatt gttaagcgac agaaaatcaa tatttaagtt ctcaaaaaaa
     5581 ttaacgttta tcaaaaaact ctatctttga ttcctaacct ataaaacacg tcgaaccaat
     5641 ctatggaact aaaggcacaa aaccatgcga tcagcaacga ggcagttttg catgtccatg
     5701 ttcagaccga aatcctaaat caatgtgaca tgttacaaca gtcccttcgt gaaaaaactg
     5761 ctcaattagc cgcaaagcgg ttgtttgata ttgtggtcgc gtcggtactt attatcttgt
     5821 ttatgccctt tctgctctta atcactattc tgatcaaatt aacctcacgc ggacctgtgt
     5881 tgtacagcag tgagcgagtg gggtttggtg gtgatcattt caactgttac aagtttcgat
     5941 cgatggtgat cgatcattct tcgaagcaaa gggatcacaa agcggcgatc aatgggcagc
     6001 ggctcggagt tttgcataag cgaaaaaacg acagccgtat tacgtttatc ggcaggatca
     6061 ttcgtaagac aagtatggat gaattgcccc aattatttaa tgtgttggca ggagatatga
     6121 gcattattgg tccgaggccg cttgttcctt ttatgctggt tccgtatcct gaatttcgcg
     6181 atgttcgaag ccttgttcgt ccgggaataa ccggattatg gcagatccgt gaccgtgaac
     6241 ataataccag tgccgagtac atgatctccc acgacactga atacattgca aactttagtc
     6301 tcctgctgga tctaaaaatt ctttgcgata cgcccctggc cgtaatatca ggtaaaggag
     6361 cttattaatt ttgcacatca cgcttgaaat ttgaaataca actccgaata tgttgagagc
     6421 tgatttcgtt attgttggtt cagggctaac cggtagtaca attgcgcggc tgctggctga
     6481 tcacgaacag gatgtgttgg tgatcgatag aaaagatcat attgccggaa acgtatacga
     6541 ctaccggcat gaatcaggag caatgatcca caagtatggt cctcattact tcagatgcgg
     6601 gtctgaaaaa atatggaatt tcctgaatcg tttttcagaa ttttatgatt gggcagcaac
     6661 gcttcgttca aaagtgaacg gtgaatatct caactggccg gtaagccagg actacataga
     6721 aaagatcgtc ggcaaagaat gggatctttt caaaggcgag gcttcaaatt tcgaagaagc
     6781 ttgccttgca aaaatgccgg ataaattata tcagcttttt attaaaggct acaccgaaaa
     6841 gcaatggggc gtacatgcag ccgaactgga taaagacctt gccgttagga tcacgatcaa
     6901 taaacccaac gtaaacacac ttactccgaa tcatcgctgg aacgctttac cgaacaatgg
     6961 ttataccgaa atggtaaaga acatgctgga aggcataccg gtgaaattgc acttcgatta
     7021 tttgaaaaat cgcgaacggg ttatcgccga taaaatgctc atctttaccg gccccatcga
     7081 cgaattcttt cactataagt ttggcaaact aaaatacaga ggccagggcc gtagaattga
     7141 atacctggaa aatgttgaca cgtttcagcc atgcgtacag gtgaattacc cgaatccgga
     7201 tgaaccgcgc atcaggacaa ttgaatggaa acacttgttg cagcctgctg accggtccag
     7261 cgtgaccggt acagtgatca ctcacgaaac gcccttcact ccagaggaag ctaaccagta
     7321 tgaatatccc ttccctgaca aattcaataa acaattgtat gatgaatacc gccgcgaagc
     7381 ggatcatctg aaaaatacac ttatttgcgg aaggctgggt gaatacaggt attatgatat
     7441 ggaccaggcc atcggcagag cgatgaagct tacgtctgct atacttgaaa gatacaatgt
     7501 gccttcggtg caatacgcca aagcaatttg acaactagtt gcaactgctt tgttctcctt
     7561 caagatagat ctctttttta ttgcctgcgc gcacgtcgct cagaaagcac agaatattgg
     7621 ctaccctgaa atcaagcgaa aaaacgccgt ggccaccctc gggatctacg tgagctatcg
     7681 ccgttatgcc taattctttt aaacgattat acaacggata cgtgccgtaa ataacgcttg
     7741 cgtccgggca cggaatgatc gggccaaaat tgaacggaac tgtctggtct ttctttccgt
     7801 gaaaaaaaat tgtaggtaaa gcatttgcag aagttatcag ttgcgggtct gcgtatgcac
     7861 cccacatgct gataatgcct tgtaatttgt acgcggaatt cacatcatga gtggaatcat
     7921 cgagtggccc catcgtcttc gacaaaccgg tgaaatatac atcagcctct tgctgggtta
     7981 aataggctgt aaaaagggcg gtgacggctc cggcgctgcc gccgccaata aaaactgagt
     8041 ccctatcgat cgaatattca tccgcgtgtt ccatcaaaaa atgcaacgcc gaatgtgcat
     8101 cctgcaaagc ccggtaaatt gcctgcttca attgaacagt gtctgcgctg catactttac
     8161 gcgtgccgcc ccagcccaaa cgatagtcta tcgtcgccgc aacatatcca cgttcagcca
     8221 atgctgcaca tactatacct aatggttttt tagtacctct tttaaatccg ccgccatgga
     8281 tcaataacac caaaggaaat ttttttccat cggcctctgg tggcttatag atatccatgc
     8341 cgagtggttg ttgaacgtcc tgcacatttt ttttagttgt gtagataacg tctctgagcg
     8401 ccacaccggt aaaatttttc aacgccgtcg ctttcagcgt tgagtcttca tcatcatttt
     8461 ctgcatttgt tgttgtatcg tgcacatttt gcgcattaac accggaaaat gaaaagacga
     8521 tcaacagaac cgatatgaat acacaaaggg tctttactct tcgccgcata aattgcaatt
     8581 cgtttttttg gatatcaagt tctaagaagt aacaggttct gagaattttt tcaattcaat
     8641 tttatttcaa acaacgccgg ccacattttg ccggttatgt aaaagctgtt cttcgcagaa
     8701 tcataggcaa ttccatttag aacgtagcct gtgttcacag aatattcgtc agggttaaag
     8761 ttcagtccac tttgggccag caattttgag caatccatct tgccttccac cttgccagtt
     8821 gtggcgttta ttttcaggat gtaatccgtt tcgtattgat tcgcatagat agatccgttt
     8881 gcatattcca gctcatttaa taacgcaaca gggccatagt tatctgttac accaacctgc
     8941 ctgattattt tgaatgtttc ggggtcaaca aaataaagat tgctgctccc ggtgcttacg
     9001 attatttctt tcccgttatt cgtcagtccc caaccctcaa acggccaggt gagttcattt
     9061 atttttttaa acgttgacgc atcatacaca aaaactttat tttctttcca ggtaagctgg
     9121 taaatcttat tattcatcac tgtaatcccc tcaccgaaaa agctcttatc caggcttatt
     9181 tccttttctg ctttgccatc tgtaatatgc tcctttataa gtttactgct gccatagttg
     9241 cccgtgccct catacaagct gctgtcgagc cattgcaatc cctgcgtata agatgaagtg
     9301 tcgtgcgggt aaactttcac caccgaataa ttcagaactg gcggagccgg attgctgcta
     9361 tcaacaaccg ggttagttgg tttgtgatta ttacacgctg caaagagcag gagcagaaac
     9421 accgcaaaaa ctattttttt cattcgtcga tggaaattta tttcgctgtt ttggttcaaa
     9481 cgttctattc gcaaaagtag gtttacaaaa attaaataaa tggtaattaa gcagaggatg
     9541 cgcattgatg tttagccgct tcgatatatg aattgtcacc acatcatttg cgctacctgc
     9601 cggatacttt ttgtgtcaag ttaaaaacta gcattatttt tatcgtttca tgaaaaatca
     9661 tatgcgatca caatttatac tgctgctact gcttgctgta agcatcacca caactgcaca
     9721 aagaaaactg tcagaatcgc cttcgcaaaa attaacgaca gaagactacg attcctctac
     9781 gctcactacc ttaaagtggc gcagcattgg gccgtggcgc ggaggcaggt gtttggcggt
     9841 tactggcgtg ctgaatgacc cgtacacgta ctacatgggc gcaactggtg gcggcatctg
     9901 gaaaaccacg gacggcggta acagctggct accaatttcc gattctgctt ttcactcagc
     9961 gtcggttggt tctttagcaa tatccgcttc tgatccgaac atcattttcg ctggtatggg
    10021 cgaatacgca atacgcaata ctgctatcat gggcgacggg atatataagt caatcgatgc
    10081 cggaaaatca tggaaacatg tactggcgct tgatgcgtct gcggtcggac gaattcttat
    10141 tcatccgtca aatccaaatc ttgtttacgc tgcggtgatg ggcaaaatgt tcggcgaaaa
    10201 taaagaacgc ggcgtttatc gcagcagcga tggcggtgct acatggaaac aaattttatt
    10261 taagaatgac agtacaggcg ctattgatat gcggttcgat cccaacaacc cttccatcat
    10321 ttatgcatcg ctgtggcagg tatatcgcaa ttcctggagc ctgaacgacg gaggccaggg
    10381 aagtggttta tataaatcaa ctgatggagg cgacacatgg caactgctat ctaacaatcc
    10441 gggtctgccg aaaggcattt taggtaagat gacgatcgcg atcgccgaat ccaactccaa
    10501 tcatgtgtac gctatggtcg aaaacaagaa tggtggcctt ttcagtagca cggacgcggg
    10561 caaaacgtgg actcgtgtct cgacacaaaa tgatcttaca caacgcccgt ggtatttcag
    10621 cggcgtttgg gtcgatccaa aaaatgaaaa tcatgtgtat gtgatgaacg ttcagttttg
    10681 gcaatcgatc gacggaggaa aaacatttac cgcgataaac caggaacatg gagacaacca
    10741 cgacatgtgg atcaatcct
//
LOCUS       DASQJI010000805         1557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_432854,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000805 DASQJI010000000
VERSION     DASQJI010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432854"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VEV83_21210"
     CDS             <1..311
                     /locus_tag="VEV83_21210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47717.1"
                     /translation="HGDGNTTFRNNKFPTFEPVTYHVSPRFQMPDYSVKEVKNASNPD
                     PRTTIFWNANIVTDANGEANINFYTADKAANYTITVTGLTENGQLVYKRITISNAGKN
                     "
     gene            472..1365
                     /locus_tag="VEV83_21215"
     CDS             472..1365
                     /locus_tag="VEV83_21215"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HYK47718.1"
                     /translation="MTNYYEILEIEDFASLETIKDAHRRLALQYHPDRNKGDKSCEEK
                     FKVIQDAYEHLNTFEKKQTYDEQLTAVYAYEQAEPSYEFNSYPEPEPQRYNRRKRYSY
                     RFSWIIILAFSSLVYHTISNNSQVPDDYSIIYQNNSNSTQPLLRAENDQSRTAPGSEM
                     ISQDGRVLFTIGSSKQEVFVAQGRPFHVEVVDVFNKEVWSYNRSTISFEDGFVTGYNN
                     ADSNLNVTVKRADASAKVLSYSVGSSTDDVLTIEGVPEAVTKIMGSNEEIWTYGSAYI
                     TVRNHLVESYSDNANVLHVKR"
     gene            complement(1389..1544)
                     /locus_tag="VEV83_21220"
     CDS             complement(1389..1544)
                     /locus_tag="VEV83_21220"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HYK47719.1"
                     /translation="MNQLVKRTVYDTLPVTVEYSMTNYGKSLEKVIEELAKWGMQHRK
                     RILGKSK"
BASE COUNT          463 a          351 c          327 g          416 t
ORIGIN      
        1 gccacggtga cggaaatacc acttttcgca acaataaatt tccaaccttc gagcccgtga
       61 cttatcacgt ctctcctcga tttcaaatgc ccgactactc ggttaaagag gtaaagaatg
      121 catcgaaccc tgacccacga accacaattt tttggaacgc aaatattgtt actgatgcga
      181 atggcgaagc gaacataaat ttttacactg cagataaggc cgcaaattat acgatcacgg
      241 tcaccggctt gaccgaaaac ggtcaactgg tttataagcg tatcaccatc agcaatgccg
      301 gcaaaaatta ggttcgggcc gccatcaacc tgattcgtgt tggtgagtgg tgataaacca
      361 gtaaaaattt ttgccactgc aaaaagccgc tcccgttgag aggttttttg catcatcgca
      421 catgatgtta tcattcaaat tctttaaatt tgaagaccac ccattgtctg aatgaccaac
      481 tactatgaga tcctcgaaat agaagatttc gcgtcacttg aaacgatcaa agacgcacac
      541 aggaggctgg ccttgcagta tcatccggat cgcaacaaag gagataagtc gtgcgaagaa
      601 aaatttaaag tgatacagga tgcctacgag cacttgaata ccttcgaaaa aaaacaaacc
      661 tatgatgaac agttgacggc cgtgtatgcc tacgaacaag cagagccttc atacgaattc
      721 aattcttatc ccgagcccga acctcaacga tataatcgcc gaaaaagata cagctatcgt
      781 ttttcgtgga tcattatcct ggcattttct tcactcgtgt atcatacgat cagcaataat
      841 tcgcaggtcc ccgacgatta ttcgatcatc tatcaaaata actccaacag cacccaaccg
      901 ttgttgcgtg cggagaatga tcagtcacgg accgcacccg gttctgaaat gatttcgcag
      961 gacggtcgcg tcttatttac tattggttcg tcaaaacaag aagtctttgt tgcgcagggc
     1021 cgaccattcc acgtagaagt tgtggacgtt ttcaataaag aagtgtggtc atacaatcgc
     1081 agcaccatct cttttgaaga tggatttgta accggctata ataatgccga cagcaacctg
     1141 aatgttacag tgaaacgtgc agatgcatct gcaaaggtgc tatcgtactc tgttggttca
     1201 tcaacagacg acgtgttgac gatagaaggc gtgcccgaag ctgttacgaa gatcatgggt
     1261 tctaatgaag agatatggac gtatgggagc gcttacataa cagtcaggaa tcatttggta
     1321 gaaagttatt ctgataacgc caatgttctt cacgttaaga gatgataaga aagtatttct
     1381 aaccgcattt attttgattt tccaagaatg cgttttcggt gctgcatacc ccatttggcc
     1441 aactcctcga tgactttttc aagcgattta ccatagttgg tcatggaata ttctacagtt
     1501 accggcagcg tgtcgtaaac tgttcgttta acgagctgat tcatttcaag atctcta
//
LOCUS       DASQJI010000806         6832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_124199,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000806 DASQJI010000000
VERSION     DASQJI010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6832
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124199"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1239)
                     /gene="gldE"
                     /locus_tag="VEV83_21225"
     CDS             complement(<1..1239)
                     /gene="gldE"
                     /locus_tag="VEV83_21225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated protein GldE"
                     /protein_id="HYK47720.1"
                     /translation="MEIHALQFSFLQVHSPIDPQATTVLIFLLVAFVMLSFVVSGAEV
                     AFFSLTFKDINLLKTKEQSYFKRIVDLLEDPKGLLASLLIANSFSNIAIIIVSNLLLD
                     IFVDFQKLPAVWVEFLVKVVAVTSVLVLFCEVIPKIYANHNNIRFLKNFGIVTEGTYY
                     LFRGMGNWLVKYSDMIEKKLTKRSKTAYSLEELDHAIDLTTNNAASEKEKNILKGIVK
                     FGNITVKQVMRTRLDVSGIDYDTTLPELMKKIEDLHYSRLPVYKDDLDEVVGVLNTKD
                     VLPCVNETDQCDWHSLMRPPFFVHEQKLIEDLLREFQSKRKHFAIVVDEFGGTSGIVT
                     LEDVLEEVIGEIKDEFDDEDTGFKKIDDNNYLFDGSIMINDVCRLMNLPSDIFDHIKG
                     ESDSLAGLVLEIAGEIPQVNQ"
     gene            complement(1312..1761)
                     /locus_tag="VEV83_21230"
     CDS             complement(1312..1761)
                     /locus_tag="VEV83_21230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HYK47721.1"
                     /translation="MRGVNRVMLIGNLGKDPDIQYLEGNIGVAKFPLATTETYKDRGG
                     KLVSQTEWHTVVLWRGLAELAQKYLHKGSLIYVEGRLRTRSWEDREGNKKFATEIVAD
                     NLIMLDKRSDSQGTHFPPAPSAHENVEGFSSSDAPPLGDEPAGNLPF"
     gene            complement(1852..2925)
                     /gene="mutY"
                     /locus_tag="VEV83_21235"
     CDS             complement(1852..2925)
                     /gene="mutY"
                     /locus_tag="VEV83_21235"
                     /inference="COORDINATES: protein motif:HMM:TIGR01084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HYK47722.1"
                     /translation="MVKAQKIFTRTLLDWNRLQNTRAMPWKGEKDPYRVWLSEVILQQ
                     TRVEQGWSYYEKFIAKYPSIEKLAAAKDEQVFKLWEGLGYYSRCRNLLHTARMITDKY
                     HGKFPADRDDMMRLKGIGSYTASAIASFCFDLPYAVVDGNVLRVIARFFGIQTPIDTS
                     EGKKFFSSLAQACLDKVQPGPYNQAIMDFGATICKPLPLCDACMLRKNCRAIKLKKVS
                     DLPAKSSRLQKKTRWFSYFVFIADQRMFVHERNAKDIWQHLYEFHLVETAADPEWTSR
                     KVKAWLKKNLAIDSIVSIRIIRALTQALTHQMINGYFIETELHSVPASLQGNGSWMTK
                     KLIGRKPFPRFIHQYLSEKKSGQ"
     gene            3012..4910
                     /locus_tag="VEV83_21240"
     CDS             3012..4910
                     /locus_tag="VEV83_21240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HYK47723.1"
                     /translation="MHYVSAEGLTKSFGAEPLFRNISFNISEGDKIALIARNGFGKST
                     LLKILAGKETVDEGKLWVHKDVTVALFEQNPQFHEEKTALENIFHGEHPVMVAIKAYE
                     EAVDTGDAGALSKALIKVDELNAWDFESKVKQILGKLNIHDLNTEVRELSGGQRKRIA
                     LARTLIDIGFDHTHTFLIMDEPTNHLDIDMVEWLEYYLNKENVTLLLVTHDRYFLDAV
                     VDEIWEIDNGKIYSYKGDYENYLEKKAARLENEQANIDKAQNLYRHELEWIRKQPRAR
                     TTKSKSRIDAFAETEQKAKQKIQDAQLNISVKMSRLGGKIAEMKKVYKNYGEKIILKG
                     FDYTFNKGERIGIIGKNGTGKTTFINILQGLEKPDSGKINVGDTIVFGNFSQQGLDAK
                     EDMRLIEYVKTFAESFPLAKGGSLSASQFLELFLFPPEKQYTYLSALSGGEKKRLQLL
                     TILFRNPNFLILDEPTNDLDLPTLNVLENFLADFPGCIIIVSHDRYFMDKLVDHLFVF
                     EGNGVIKDFPGNYTQYRLEEKSVESLQMTDDSKQVNESANSQQSTVNSQQSSVNRKLS
                     YKEKREFEQLEKDIADLEAEKQSIEEQLSNPEAPFEKLNLLSHRINAITNELHQKEMR
                     WLELSELA"
     gene            complement(4971..5951)
                     /locus_tag="VEV83_21245"
     CDS             complement(4971..5951)
                     /locus_tag="VEV83_21245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HYK47724.1"
                     /translation="MSKYDVLIIGGGPIGLACGIAAQREDLNYIIIEKGCLVNSLFNY
                     PLNMTFFSTSERLEIGGVPFMSLNPKPHRPEALEYYRRVAKDFDLNIHLFEKVEAVTR
                     LEDQSFEIKTSKGNYQSINVIVATGFYDLPKMLNIPGEELSKTKHYYRDPFYYPFQKV
                     LVIGASNSAVDAALETWRKGAEVTMVVRQPEIGQRVKYWVRPDIQNRIKEGSIKAYFN
                     STVKEIRCNEVDIETPEGLITIENDFVLAMIGYQPDFDLLRRLGIILSDDEKQCPLYN
                     GDTMETNQRGIFLAGVVCGGFETHKLFIENSRKHADKIIATIVGRMTVES"
     gene            complement(6502..>6832)
                     /locus_tag="VEV83_21250"
     CDS             complement(6502..>6832)
                     /locus_tag="VEV83_21250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019514839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HYK47725.1"
                     /translation="TMEAEAAHGTVTRHYREHQKGKPTSTNPIASIFAWTRGLEFRGK
                     LDNNQPLIDFCHALEQVCVETVESGKMTKDLAITIKPKVEHGTDYLYTEEFLDALDEN
                     LKRKLAK"
BASE COUNT         1984 a         1502 c         1432 g         1914 t
ORIGIN      
        1 ctggttcacc tgcggaatct cgccggctat ttcaagcaca agtccggcca gcgagtcact
       61 ttctcctttg atgtgatcga aaatgtccga gggcaaattc attagcctgc atacatcgtt
      121 gatcatgata cttccatcga atagataatt attatcatcg atctttttga atccggtgtc
      181 ttcatcgtcg aattcatctt tgatctcacc gatcacttct tccaaaacgt cttcgagcgt
      241 tacaatgccg ctggtccccc cgaattcatc aaccacgatt gcgaaatgct ttcgttttga
      301 ctggaattct cttagcaggt cctcgataag tttttgttcg tgtacaaaaa aaggaggcct
      361 cattaatgaa tgccagtcac attgatcagt ttcattcaca caggggagca catctttggt
      421 attcaaaaca cctaccactt cgtcgaggtc gtctttataa accggcagcc tgctgtaatg
      481 gaggtcttcg atctttttca tgagttcggg caatgttgta tcatagtcaa ttccgcttac
      541 atcgagcctc gtccgcatta cctgctttac cgttatgttg ccaaacttga cgatcccttt
      601 tagaatattt ttttcttttt ctgatgctgc attgttggtg gtaagatcga tcgcgtggtc
      661 aagttcttca aggctgtagg cagtctttga acgcttcgtc agtttctttt ctatcatgtc
      721 tgaatactta acaagccagt ttcccattcc ccgaaacagg tagtaagtac cttctgttac
      781 gatcccaaaa tttttaagaa agcgaatatt gttgtgattc gcgtatattt ttgggatcac
      841 ctcgcaaaat aaaacaagca ccgacgttac agctacaacc ttcacaagga attcgaccca
      901 tacggccggt aatttttgaa agtcaacgaa aatatcgagc agcaggtttg aaacgataat
      961 aatggcaatg tttgaaaagc tatttgcgat aagcagcgaa gcgagtaatc cctttggatc
     1021 ttccagcagg tcgacgatcc ttttaaaata agattgctct ttcgttttta ataaattgat
     1081 gtctttaaat gtgagggaaa aaaaagctac ttcggcgccc gacactacaa acgaaagcat
     1141 aacaaaggcg accagcaaaa aaataagaac agttgttgcc tgcggatcaa tgggactatg
     1201 aacttgtaga aatgaaaact gcagcgcgtg aatttccaaa ttatttggtt ttcgttaaaa
     1261 cacttccgtc aaactttcaa acacgctcga aaggtataat aaaatccgga attagaacgg
     1321 aaggttgccc gcaggctcat ctccgagtgg gggcgcgtcc gagctgctga aaccttcaac
     1381 attttcatgg gcggaagggg ctggaggaaa gtgggtgccc tggctgtcgc tcctcttgtc
     1441 aagcatgatt aaattatcag caactatttc tgtagcaaat tttttatttc cctcgcggtc
     1501 ttcccaactg cgcgtgcgta aacgaccttc tacatagatc aggcttcctt tgtgcaggta
     1561 tttttgcgca agttcagcca gccctctcca taaaacaact gtgtgccatt cagtttgaga
     1621 aaccagcttg ccgccgcggt ctttgtacgt ttcagtggtg gccagcggga atttagccac
     1681 accaatattg ccttccaggt actgaatatc cgggtctttc ccgaggttgc cgatcagcat
     1741 caccctattt acgcctctca taaaatatat tttaaatcat caatgaagcc ataactgact
     1801 ttaaagttat ataaaaagat ttaatgtaaa ataacaatga gggcagaaaa gttattgccc
     1861 cgattttttc tcggaaaggt attgatgaat gaagcgagga aacggttttc tgccgatcaa
     1921 cttctttgtc atccagcttc cgttgccttg taatgatgcc ggaaccgaat gcaattctgt
     1981 ttcaataaaa tatccgttga tcatttggtg tgtcagcgct tgtgtcagtg cccgaattat
     2041 gcgaatggaa acgatggagt caatcgccaa attttttttc agccatgctt taacttttct
     2101 tgacgtccat tccggatcag cggccgtctc cacaagatga aactcataca aatgctgcca
     2161 aatgtctttt gcgttgcgtt cgtgaacaaa cattctttga tcggcgataa aaacgaaata
     2221 cgaaaaccag cgggtctttt tctgcaaccg gctgcttttc gcaggcagat ctgaaacttt
     2281 tttcaactta atggcccgac aattttttcg cagcatacat gcatcgcaga gtggcaacgg
     2341 tttgcatatc gttgctccaa aatccataat ggcctggtta tatggtcccg gttgaacttt
     2401 atcgagacat gcctgggcga gactgctgaa aaatttcttt ccttcggaag tatctatggg
     2461 tgtctgaatg ccaaaaaacc tcgcgatcac gcgtaataca tttccgtcta caactgcata
     2521 cggcaggtca aaacaaaagg aagcaatagc gctcgctgta tacgaaccaa ttcccttcag
     2581 tctcatcatg tcatcacgat cggctggaaa tttaccatgg tacttatcgg tgatcatcct
     2641 tgccgtgtgt aataagtttc tgcagcgcga ataataaccc aacccttccc ataatttgaa
     2701 aacctgttca tcttttgcgg cggctaattt ttcaatggac ggatattttg cgatgaactt
     2761 ttcgtaatag ctccagcctt gctctacccg ggtttgctgt agtatcactt cacttaacca
     2821 aaccctgtac gggtccttct ctcctttcca gggcattgcc ctagtattct gtagcctgtt
     2881 ccagtctaac aatgttcgtg taaatatttt ttgcgcctta accatatgcc catctaaaag
     2941 caatgcaacg taagccagaa attacaaaca gcaaacgatg aaagctactt accgggaact
     3001 aattttgcat aatgcattac gtatctgcag aagggttgac aaaaagtttt ggtgctgaac
     3061 cgttgttccg caatatttct ttcaatattt cggaaggcga taagatagcg ctgatagcgc
     3121 gcaatggttt tggcaagagc actctgctta aaattcttgc aggaaaggaa acggttgatg
     3181 aaggaaagct gtgggttcat aaggatgtaa ccgtagcatt gttcgagcag aacccgcagt
     3241 tccacgaaga aaaaaccgca cttgaaaata ttttccacgg cgagcatcct gtgatggtgg
     3301 cgataaaagc gtacgaggag gctgtagaca ccggtgatgc aggagctctc tcaaaagctt
     3361 taataaaagt ggacgagctt aatgcctggg actttgaaag taaagtaaaa cagatccttg
     3421 gcaaattgaa tatccatgat ttgaacacgg aggtgagaga attgagcggt ggacaaagaa
     3481 agcgcattgc gttggcacga acactcattg atatcggatt tgatcacacg cacacattcc
     3541 tgatcatgga tgaaccaacc aatcacctcg atatcgacat ggttgaatgg ctcgaatatt
     3601 atttgaacaa ggaaaatgta acgctgctgc tggtaacgca tgaccggtat tttctggacg
     3661 cggtagttga tgaaatatgg gaaattgata acggaaaaat ttacagttac aaaggtgatt
     3721 acgaaaatta cctggaaaag aaagcagcac gtttagaaaa cgaacaggcc aacatcgaca
     3781 aagcacaaaa tttatacagg cacgaactgg aatggatccg caaacagcca agagcgcgta
     3841 ccacaaaatc aaaaagccgg atagacgcat ttgctgaaac cgaacaaaaa gcgaaacaaa
     3901 agatccagga tgcgcaatta aatataagtg tgaagatgag caggcttggc ggcaagatcg
     3961 ctgaaatgaa aaaggtgtat aaaaattatg gagagaaaat tattttgaaa ggattcgatt
     4021 acaccttcaa taaaggtgaa cgcataggaa ttatcggaaa gaatggaacg ggaaaaacca
     4081 ctttcataaa tattttgcaa ggcctcgaaa aaccagacag cgggaagatc aacgttggtg
     4141 atacgatcgt atttggaaat ttttcgcaac aggggctgga cgcaaaagaa gatatgcgcc
     4201 tgatcgaata cgtaaaaact ttcgctgaaa gctttccttt ggcgaaaggt ggttcattga
     4261 gcgcttcaca atttcttgag ttgttccttt ttccgccgga aaaacaatat acttatctat
     4321 ctgcgctgag cggtggcgaa aaaaaacgtt tgcaattgct caccatcctg ttccgcaatc
     4381 caaatttttt gatcctcgat gaacccacca acgatctcga tctgccaacc ttgaacgtac
     4441 ttgaaaattt tttggctgat ttcccgggct gtatcataat tgtttctcat gaccggtatt
     4501 tcatggacaa actcgtagat catttatttg tgtttgaagg caacggcgtg ataaaggatt
     4561 tccctggaaa ttatacgcag tacaggttgg aagagaaatc agttgaaagt ttacagatga
     4621 cagatgacag taagcaagtc aacgaatctg ccaacagtca acagtcaact gtcaacagcc
     4681 agcagtcatc tgtcaaccgc aaactgagct acaaagagaa acgcgaattt gagcagttgg
     4741 aaaaagatat cgccgatctc gaggccgaaa agcaaagcat agaggagcaa ctgagtaatc
     4801 cggaggcgcc gttcgaaaag ttgaatttac tcagccatag gataaatgca atcacgaatg
     4861 aacttcacca gaaggaaatg cgctggcttg aattgagcga gctggcgtga ggttagttgc
     4921 cagttgacgg ttgacggatg acagaaagcg gtcgatcctt ccgtcaaccg tcaactctca
     4981 accgtcatcc ttcccacaat agtcgcaatg atcttatctg cgtgctttct cgagttttcg
     5041 ataaagagct tatgtgtttc aaatccgcca caaaccacac cggcgagaaa tattcctcgt
     5101 tgatttgtct ccatcgtatc accattgtac agcgggcact gcttttcatc atccgacaaa
     5161 ataattccaa ggcgtcttag caaatcgaaa tcaggttggt aaccgatcat tgcgagaaca
     5221 aaatcatttt cgatggtgat caatccttcg ggcgtttcaa tatcaacttc attgcaacgg
     5281 atctctttca ccgtcgaatt aaaatacgct ttgatgcttc cttctttgat ccggttttgt
     5341 atatcggggc gcacccaata cttcacgcgt tgtccaattt caggctgccg cacaaccatt
     5401 gtaacctccg ctccttttct ccacgtttcg agtgctgcgt cgactgctga attgcttgct
     5461 ccgatcacga gcactttttg aaacgggtaa taaaacggat cgcgataata gtgttttgtt
     5521 tttgacaact cctcgccggg aatgttgagc atcttcggca gatcgtaaaa tcccgttgca
     5581 acaatcacat ttatcgattg ataattcccc ttgctcgttt taatctcgaa cgactgatct
     5641 tccaaacgcg ttacggcctc tactttttcg aacaagtgaa tattaagatc gaaatccttt
     5701 gccacccggc ggtaatattc gagcgcttca gggcgatgtg gtttcgggtt caggctcatg
     5761 aacggaacac caccgatttc cagcctttcg gatgttgaga aaaaggtcat attcagcgga
     5821 taattgaaaa ggctatttac caaacaacct ttctcgataa taatgtaatt aagatcttcc
     5881 ctttgtgccg caatgccaca ggctaacccg atcggcccgc caccgattat caaaacatcg
     5941 tacttgctca tgcgcgcaaa actaaaacag aaacaaatag gtaagttttt tgaaacaagc
     6001 cagctacttt gtatttgaaa ccaccaaggc tggaacgtcg catttgaata agtttcaagt
     6061 aactttatga cagtcgaatt aaaatgttta taaaatctgc cgaaaaaaaa tatctgttag
     6121 agattcaaag agagggacat cttcatctga aaacattaag tcatttcgcc acaacagagg
     6181 aagcgagtac acgctgttaa tcaaaccaca tccattttta aagcggctaa aaagccgtct
     6241 ggccgatttg aagatttctt atcaatatgg cttggttgag tataaggatt tttccgcctt
     6301 tgcaggtgaa aaaaatccat ttcagaaacc tttaatatac aaaaacgaat atgagtttag
     6361 attgtttctt ccgatggaag aaaccaagga tcattatgac ttatatattg ggaattgcag
     6421 caaattctct tcgatccaag aaatttcaag taacccggca atttttatgc tggacaaatt
     6481 aagatcctaa tggcctaatt cctatttagc cagtttcctc ttcaaattct cgtcgagcgc
     6541 atcgagaaat tcctccgtat ataaataatc tgtgccgtgc tcaacttttg gtttgatcgt
     6601 tatggcaagg tcttttgtca ttttgccgct ctccacagtt tcaacgcaaa cctgttcaag
     6661 tgcatgacaa aaatcgatca gtggctggtt attatcgagc tttccacgaa actccaaacc
     6721 gcgcgtccat gcgaagatcg atgcgatagg attggttgaa gttggctttc ctttttggtg
     6781 ctcccggtaa tgccgcgtta cagtaccgtg tgcggcttct gcttccatcg tt
//
LOCUS       DASQJI010000807         3426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2583407,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000807 DASQJI010000000
VERSION     DASQJI010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2583407"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2254
                     /locus_tag="VEV83_21255"
     CDS             <1..2254
                     /locus_tag="VEV83_21255"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47726.1"
                     /translation="TGRKLWVSDGTDAGTTPAPNNNDIVIDADYLGTTFPVLNSVLYI
                     PGSSSSKGNGLFKYDASDAAGLVLVKDLAPGADPEFIVPSEMEVVYNTLYFKVTNYTG
                     GLHDELWNSKGTKLSTQPVKIFLAGETTYSLHAFSGNLYFVKYDIVYGTELWKTDGTD
                     AGTVLASDIFKGVTSSYPACLTNLHGKLLFSATDELKGTELFFTDNAGYTTDVVKDIN
                     TVSTSSSYAAYYGGTAVLGDHVFFSAYERVHDFELYRSNGSSHGTDLFDDISPGETGS
                     FPHELLSKNNEVYFITQIFTQSAASTAIYKTNNSKNGLRKITPDFDANQYYISSFKVA
                     DNGIVFFGVLNYYTYSYELWRSDGTAEGTFVLSSALYFDFTYYRFADYLNVVGNTALF
                     AAGNSDHGIELWKSDGSLAGTKMVKDINPGSYDALPGGMFAYNNEVYFGALDGTSPYY
                     SFWKSDGTKAGTVKLANIDPWWGFDADETKKYFCVSNNTIFFSAIDHSNEKGTKLWKT
                     NGTAGGTGPIKDLDGANDGGLLPAAYELTDVNGTVFFTATDFVYSKKLWKSDGTAEGT
                     QLIKDITNDPDGVSMTNLTSFGGRLFFANSGSLWSSDGTVEGTIPLDDEGISGVQVLN
                     IAATSDKLFITGYNNKYGVELYAGEIDDETGKFATVRTSNESAKTVSALNAFVYPNPA
                     VSNATLQLAGNMKNVSVTISDMRGNKLWQSSNISAPIISLPTEKFAAGIYLVTVVNGK
                     ESKTITLVKQ"
     gene            2421..>3426
                     /locus_tag="VEV83_21260"
     CDS             2421..>3426
                     /locus_tag="VEV83_21260"
                     /inference="COORDINATES: protein motif:HMM:NF026288.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47727.1"
                     /translation="MRKIIFLLLLITVCNRGELFSQKQRQAVIDSLLTELPKAKEDTN
                     KVNLLADLGQAALDNYEYDKALTYCKNCLSLSERLDFKKGKAAAYAIMAMAYDSRGNY
                     TEALVNYNAALKLQEESGDKKGVAGTYNNIGIVYAYQGNSAEALKMYLASAKINEAID
                     NKAWLANNYANMGLIYQGLGNYSEALKKSFAALKIYEALGDKQNIASSYNNIGLLYWG
                     QKEYTEALKIYYQALKIIGKGGDSMRMHHPYNNMAGIYSDIGNYAEALKNYSLSLKIR
                     ERIGDKNLIADSHTGIGIVYQKMNNYKKAIDNFNEALNLYTETSNTYALAGIHASFGE
                     I"
BASE COUNT         1082 a          649 c          745 g          950 t
ORIGIN      
        1 taccggtcgc aaactatggg tatccgacgg taccgatgcc ggcactacgc ctgcaccgaa
       61 caataatgat atagtaatag atgccgatta tttaggaaca acttttccgg ttctgaacag
      121 tgttttatat atacctggct cttcttcttc caagggcaat ggtttattta aatatgatgc
      181 atcagatgca gccggccttg tgttggttaa agaccttgca cctggtgccg atcctgagtt
      241 cattgtgcct tcagaaatgg aagttgtata taatacgctg tattttaaag taaccaatta
      301 tacaggtggc cttcatgatg aattgtggaa ttctaaaggc accaaattgt ccacacagcc
      361 cgtaaaaata tttcttgccg gcgaaacaac ttattcgtta catgccttca gcggcaattt
      421 atattttgta aaatatgaca tagtctacgg tactgaatta tggaaaactg acggtactga
      481 tgcgggaacg gtgcttgcaa gcgatatttt taaaggcgtt accagctctt atcccgcctg
      541 tcttaccaac ttacatggga aattattatt cagtgccaca gatgaattaa aggggaccga
      601 gctttttttc acagataatg caggttacac gacagacgtg gtaaaagata ttaataccgt
      661 ttctacttct agctcttacg cggcttatta tggcggtaca gcagttctgg gtgatcatgt
      721 tttcttcagt gcttatgaac gggtgcatga cttcgaactg tataggtcta acggatcgtc
      781 gcacggaaca gatttatttg atgatatttc gcccggcgaa acaggttctt ttccgcacga
      841 actactgtca aaaaataatg aagtctattt cataactcaa atttttaccc aaagcgctgc
      901 aagtactgcc atttataaaa caaataattc aaaaaatggc ctgcggaaga tcacaccaga
      961 tttcgacgcg aaccaatatt atatatcgag ctttaaggta gcggataatg ggattgtatt
     1021 ttttggtgta ctcaattact atacctattc gtacgaactc tggcgaagcg atggtactgc
     1081 tgaaggaacc tttgtattgt catcggcgct ttattttgac ttcacctatt atcgctttgc
     1141 cgattatctt aacgttgttg gtaacacagc tttgtttgct gcaggcaata gcgaccatgg
     1201 catcgaatta tggaagagtg atggcagcct cgcaggtacg aagatggtaa aagacattaa
     1261 ccccggttct tatgatgctc ttcccggtgg aatgtttgcc tataacaatg aagtctattt
     1321 cggcgctttg gatggtacaa gtccttacta ttccttctgg aaatctgatg gaacaaaagc
     1381 aggtacggtt aaactcgcga atattgatcc ctggtgggga tttgatgctg atgaaactaa
     1441 aaaatacttc tgcgtttcaa ataatacaat ttttttcagc gcaatagacc attccaacga
     1501 gaagggtacc aaactctgga aaactaacgg tacagcagga gggactggac cgataaaaga
     1561 tcttgatggt gctaatgacg ggggcttact tcctgcggct tacgaattaa ctgacgtgaa
     1621 cggcacagta tttttcactg caacagattt tgtttattcc aaaaagctgt ggaaaagcga
     1681 tggtactgcg gagggtaccc aacttataaa agatattaca aatgatccgg atggagtttc
     1741 tatgacaaat ctgaccagtt ttggaggaag attatttttt gccaactctg gctctctatg
     1801 gtcatcagat ggcactgtag aaggcacgat cccgcttgat gatgagggca tcagcggtgt
     1861 tcaggtttta aatatcgctg ccacatccga taagctgttc ataacgggtt ataataataa
     1921 atatggggtg gaactgtatg caggtgagat tgatgatgaa acaggcaagt ttgcaacggt
     1981 gaggacttcg aatgaatctg caaaaacagt aagcgcattg aacgcgtttg tgtatcccaa
     2041 tcctgcagtt tcaaatgcaa cgctgcaact agcgggcaat atgaaaaatg tatccgtaac
     2101 tattagtgat atgcgtggta ataaactatg gcagagcagc aatattagtg caccaataat
     2161 tagtttgccc acggagaaat ttgctgcggg aatttatctt gtaactgtag tgaatggcaa
     2221 ggaaagcaag actattacgc tggtaaaaca ataagagtat ccaccagtgg atcagatcat
     2281 aactgcgggg cgcaagcccc gtagttctat agagactcat ttgttaagcc ttccactaaa
     2341 tgacacaaag ggattgatgc gtagtgtgtc aacagaagat ttaacaaagg ttgattttgc
     2401 agaaacaaaa caattacagc atgagaaaaa tcattttcct gttactcctt atcacggttt
     2461 gtaatcgcgg agaattgttt tcacaaaaac aacggcaagc tgtcattgac tccctgctta
     2521 cggaattgcc caaagcaaaa gaagatacaa acaaagtaaa cctgctggct gatcttgggc
     2581 aggcagcgct tgataactac gaatatgaca aagcattgac gtattgcaaa aattgtttat
     2641 ccctttctga aagacttgat ttcaaaaaag gaaaggctgc agcatatgct atcatggcaa
     2701 tggcatatga tagccgcgga aattacacgg aagcattggt aaattataat gctgcgctga
     2761 aattacaaga agaatcaggt gataaaaaag gagtagccgg cacatacaat aacataggaa
     2821 ttgtgtatgc ttaccagggc aacagtgcgg aagcacttaa aatgtacctg gcctccgcga
     2881 agataaatga agcaatagac aacaaagcgt ggcttgcaaa taactacgcc aacatgggtc
     2941 ttatatatca gggcctgggc aattattccg aagcattaaa aaaatcgttt gccgctttga
     3001 agatctatga agcactaggt gacaaacaaa atattgcatc cagctataat aacattggtc
     3061 ttctttattg gggtcaaaaa gaatatacag aggcgttaaa gatttattac caagcactca
     3121 aaataatagg gaaaggagga gattcgatgc gtatgcatca tccatacaac aacatggcag
     3181 gaatatattc tgatataggc aattatgccg aagcattgaa aaactattcc ttatctctta
     3241 agatcagaga acgaatcggt gacaaaaatt tgatcgcaga ctcacataca ggtattggaa
     3301 ttgtttatca aaaaatgaat aattacaaga aagcaataga taattttaat gaggcactaa
     3361 atctttacac tgaaaccagt aatacttatg ctcttgcagg catacatgcc agctttgggg
     3421 aaatcg
//
LOCUS       DASQJI010000808         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2430372,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000808 DASQJI010000000
VERSION     DASQJI010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2430372"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2497
                     /locus_tag="VEV83_21265"
     CDS             <1..>2497
                     /locus_tag="VEV83_21265"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HYK47728.1"
                     /translation="AIAQQDVLTQHNDLSRTGWNNKETVLNKNNVKPASFGKLFARSV
                     DDQVYAQPLVKLNLDIPGKGPKNIVFVATVNNSVYAFDADSANVSLPYWHVNLTPANS
                     RVISRNDETGACGGFYHDFSGNMGIVGTPVIDSATNVMYLVARSVDTSGGLTKFRQYL
                     HALDITTGAEVTNSPVLISATINGTGDGSVGGQLSFNPLHQNQRGGLCLANGVVYIAW
                     ASHCDWGPYHGWVMGYDKTSLQQKYIYNSTPDGYNGGIWMSGAAPSADANGNVYVAVG
                     NGSVGKNGNASDLRNRSESALKLTPSLSVSSFFTPTNYQQLENADLDFGVTELMLLPN
                     TNLGMVGCKDGHIYVVNKDNMGGYSSTSNNAVQTIYLGNNAYLRSSFAYYQGTKEFAY
                     SWSENSLLNAYPFDRVGNKFNLANIISSGVQGPTGNNGALLAVSSNGSVDSTAILWTS
                     YAATGDANQSVRPGILRAFDATDVTKELWNSGTNPNDNPGNYAKFSCPTIANGKVYLA
                     TFSNQIVAYGLTGNNADTCGGTNIALNRPAYASSIEVAGFEAPKAFDGNLTTRWSSQY
                     SDPQYIYVDLGKKYDLCSVGLHWEYAMGRNFKLQVSDDAVSWTDVAKISNNISYDNYI
                     PVKATGRYVRMYGTQRATIYGYSLWEFDVYGKENNGCPIPSGLSTSDIYENSATLHWN
                     SNGASSYVIQYKNVDAGSWLQTTSATNSLVLNALACGTSFLYRIRSVCSPQDSSEFSI
                     SGAFTTLACNSNCNPLPTRWSTLDIGNVGVAGSACYNNAVFEIKGSGTDIWDTEDEFR
                     FAYQTLVGDGEIIAQVLDQDKTDPWNKAGIMAR"
BASE COUNT          715 a          536 c          610 g          636 t
ORIGIN      
        1 ccgcaattgc acaacaagat gttctcaccc aacacaacga tcttagccgt acaggctgga
       61 ataacaagga aacagtcctg aataaaaata atgtgaagcc ggcctcgttt ggaaaattat
      121 ttgcacgttc agttgacgac caggtgtatg cgcaaccttt ggtaaaattg aaccttgata
      181 ttccgggaaa aggaccaaag aatattgtat tcgtagcaac ggttaataac agcgtatacg
      241 cgtttgatgc cgattcagcg aacgtttcac ttccgtattg gcatgtgaat ctcacgccgg
      301 caaattcacg tgttataagc cggaatgatg agaccggggc atgcggcggt ttctatcatg
      361 atttctcggg gaacatgggg attgttggca ctcccgtcat cgattccgca accaatgtta
      421 tgtacctggt agcaagaagt gttgacacgt caggtggttt gacaaagttt cgtcaatatc
      481 tccacgcgct cgatattaca accggcgcag aagtaacaaa cagccccgtt ttaattagcg
      541 caacgatcaa tggaaccggt gacggcagcg tgggcggaca actttctttt aatccgcttc
      601 atcaaaatca acgcggcggg ttgtgccttg cgaacggagt tgtatatatc gcgtgggcat
      661 cacattgcga ctggggaccg tatcacggct gggtgatggg ttatgataaa acctcactcc
      721 aacagaaata catttacaat tcaacacccg atggatataa cggcggcatc tggatgagtg
      781 gcgctgcgcc gtcagcggat gcaaatggaa atgtttatgt cgctgttgga aatggatcag
      841 tgggtaaaaa tggcaatgca tccgatctgc gcaacaggtc tgaaagcgca ttaaaactaa
      901 caccgtcttt gtcggtaagt agttttttca cgccaacgaa ctatcagcag ttggagaacg
      961 ccgatcttga cttcggcgtg acagaactca tgcttctgcc gaatacaaac cttggaatgg
     1021 tgggctgcaa agacggacac atctatgtcg taaataagga caacatgggc ggctacagct
     1081 caacttcaaa taatgctgtg caaacgatct atcttggaaa taacgcttat ctccgttcat
     1141 cgttcgcgta ttaccagggc acaaaagaat ttgcatattc atggagtgag aactcattat
     1201 tgaatgcgta tccattcgat cgtgtcggca ataaatttaa cctggctaat attatcagta
     1261 gtggcgtgca gggacccaca ggaaataacg gtgctctgct tgcagtgtcg tcgaatggtt
     1321 ctgttgattc caccgcaatt ctgtggacaa gttatgctgc gaccggcgac gccaatcaat
     1381 cagtacgacc gggaattttg agagcttttg atgcaaccga tgtcacaaaa gaattatgga
     1441 actccggtac gaacccaaac gataatccgg gcaactatgc aaaattcagt tgtccgacaa
     1501 ttgcaaatgg aaaagtatat ctcgccacat tttcaaatca gatcgtggcg tacggtttaa
     1561 ccgggaataa tgcggataca tgtggcggaa ctaatatcgc cttaaatcga cctgcatatg
     1621 catcttcgat tgaagtagcg ggctttgagg cgccaaaagc gtttgacgga aatttaacca
     1681 cacgatggag cagtcaatac agcgatccgc agtacatcta tgttgatctt ggaaagaaat
     1741 acgatctgtg cagcgtgggg cttcattggg aatatgcgat ggggcgtaac ttcaagctcc
     1801 aggtgtctga cgacgctgtt tcgtggacgg atgttgcaaa gatcagcaat aacatttcgt
     1861 atgataatta cattccggtt aaagcaactg gtcgatatgt gagaatgtat ggaacacaac
     1921 gtgcaacaat ttatggttat tcgctttggg agttcgatgt atatggaaag gaaaacaatg
     1981 gctgccctat acccagcggc ttgtcgacat cggatattta tgagaattcc gcaacgctgc
     2041 actggaattc aaatggcgca tcctcatatg tcattcaata taaaaacgta gacgcgggca
     2101 gttggctgca aactacatcg gcgacaaatt ctcttgtgct caatgcgctg gcatgcggca
     2161 catcatttct ctacaggata agaagtgttt gctcaccaca ggactcaagc gaattttcaa
     2221 tttcgggcgc attcacaacg ttggcatgta atagtaattg taatcctttg cctacaagat
     2281 ggtcaacgct tgatatcggc aatgttggcg tggcaggttc agcatgttac aacaacgccg
     2341 tcttcgagat aaaaggatca gggactgata tatgggatac cgaagatgaa tttcgatttg
     2401 cttatcaaac tctcgttggt gacggagaaa ttattgcgca ggtgctcgac caggataaaa
     2461 ccgatccctg gaataaagca ggtattatgg cacgaga
//
LOCUS       DASQJI010000809         2260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_895453,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000809 DASQJI010000000
VERSION     DASQJI010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895453"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1162)
                     /locus_tag="VEV83_21270"
     CDS             complement(170..1162)
                     /locus_tag="VEV83_21270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HYK47729.1"
                     /translation="MTKILFIALLTCSLSCSEQNSSTPQPIIFDSDMGPDYDDVGAIT
                     MLHAYADSGYINVLATVASTRYEGVAAVMNVFNTYFNRPNIPIGIAKQNGLTLRDWQH
                     WTDTLIKNYPHQIKTNNDVPDAVEVYRKALASQPDTSVTIVTTGFLTNLANLLRSQPD
                     NYSSLDGAALVKQKVKQLVSMGGRFPEGKEFNLDQDAASSRYVFSNWPTKVLFSGFEI
                     GDKIKVGLPLIHNDQIHGSPVKDVFTICIPMAAEDSTGRKSWDETALLVAVKGSASFY
                     KLHHGSIVIAEDGSNTWDDNGAQSQSYLEEAVSPEIVQSYINNLIQHQPGGNKK"
     gene            complement(1390..1854)
                     /gene="tnpA"
                     /locus_tag="VEV83_21275"
     CDS             complement(1390..1854)
                     /gene="tnpA"
                     /locus_tag="VEV83_21275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYK47730.1"
                     /translation="MPNTFSQIYLQFVFAVQHRQSLIPKEHKEELQKYITGLVRNRGA
                     KMLAVNCMPDHAHIFVGFKPSILMCDFVKEIKVETNEFINNKMWTRFRFSWQVGYGVF
                     SYSHSHIDRVINYISNQELHHQKKTFEQEYVELLKKFEIPYDVKYLFDFVHC"
BASE COUNT          622 a          476 c          478 g          684 t
ORIGIN      
        1 cgtttgtcgt tttatgactt cgagacttgg tccgaaaaat tagaaaccac caagccacca
       61 cggcaccaag tttcaccaag ttgaatatcc atgcaatctt tggttttcaa gtagcgcacg
      121 atgtagaaat ttcacaaagc cgcgctcgaa ctttcttatt tcttatttct catttcttat
      181 ttcccccggg ctgatgttga attaaattat taatgtatga ttgaacaatc tccggagaaa
      241 cggcttcttc aagatatgat tgcgattgtg ctccattgtc gtcccaggta ttgctgccgt
      301 cttcagcgat cacaatactt ccatgatgta atttatagaa cgacgcagag cccttgacgg
      361 cgacaagcag tgcggtttca tcccagctct ttctgccggt gctgtcttcc gctgccatag
      421 gaatgcaaat ggtgaaaaca tcttttacag ggctaccgtg aatttgatca ttgtgtatta
      481 gcggcaggcc tactttgatc ttatcgccga tttcaaaacc gctgaataac accttcgttg
      541 gccagttaga aaagacatat cgggatgaag ccgcatcctg gtcgagattg aattctttac
      601 cttccggaaa cctgcctccc attgaaacca attgctttac tttttgtttc accagcgcgg
      661 cgccatctaa tgaagaatag ttgtccggtt gagaccgtaa aaggtttgca agattggtaa
      721 gaaaacctgt ggtcactata gtgacgcttg tatcgggttg tgaagccagt gcctttcgat
      781 acacttcaac ggcatcgggc acatcgttat ttgtttttat ttgatgcgga taattcttga
      841 tgagtgtatc cgtccagtgt tgccagtcgc gcagcgttaa accgttttgt ttggcaatgc
      901 cgatcgggat atttggcctg ttgaaatacg tattaaacac attcatcacg gcggctactc
      961 cttcatatct tgtactggca acggtcgcaa gaacatttat gtaaccactg tcggcgtatg
     1021 cgtgcagcat ggtaatggcg cctacgtcgt catagtcggg acccatatcg ctgtcgaaga
     1081 tgataggttg aggggttgat gaattttgtt cgctgcatga aagcgaacag gttaacaatg
     1141 cgatgaacag aattttcgtc atgatgattt tttacaaatt accagtttgc aacgttcccc
     1201 gcggcaaaat tcattttcaa tgaacaaaga cagcatcagc cgcaggaatt aatgaactta
     1261 actactgcgg ttgcgctata attttttcgg ccctgaatat actagtttca ttggagtctt
     1321 ttgctacaga tgatggaaca aattctaagc aatgtagacc gcaacagccg ttgaatggct
     1381 cttaccgctt tagcaatgta cgaagtcaaa taaatattta acgtcatatg gaatctcaaa
     1441 cttttttagc agctcaacat actcctgttc aaaagttttc ttttggtgat gtagctcctg
     1501 gttcgagata taatttatta cacgatcgat gtgtgaatga gagtacgaga acactccgta
     1561 gccgacctgc caactaaacc taaacctggt ccacatttta ttgttgatga attcattcgt
     1621 ttcaaccttt atttctttta caaaatcgca catcaaaatg cttggcttaa acccgacaaa
     1681 tatatgcgca tgatcaggca tgcaattaac cgctaacatt ttcgcacctc gatttctgac
     1741 aaggcccgtg atgtattttt gtaattcttc tttatgttct ttcgggataa gactttgccg
     1801 gtgttgaacg gcaaatacga actgaagata gatctgggaa aatgtgtttg gcataacaag
     1861 ggatttaggg ttaccaaaat taatttaagc agtgaagtga aattaaggat ttggaaggac
     1921 aattttcctt tattaaactg ccgcgttcga ggaggctgct aacggagcca gcataccgtg
     1981 actccaattc ttactataaa catgccgctc ctaacggggc ttcagaggag cttcatcttt
     2041 ataaaaacaa gaaagtgttt ccgttgcagc ctcatttata atgtgtgcaa aggaaacttg
     2101 atcaacccag gttaatacaa aaaaaaacgg tgcattcttg accggactga agaaacatta
     2161 cttcaaacaa aagacgcgtt tggcttaagg cagtgagtta ttcgcttgga aaattttttt
     2221 gtgtagcatc tgtcggctcc agaggagcca cgtgtttata
//
LOCUS       DASQJI010000810         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_740102,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000810 DASQJI010000000
VERSION     DASQJI010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_740102"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1257)
                     /gene="pepT"
                     /locus_tag="VEV83_21280"
     CDS             complement(10..1257)
                     /gene="pepT"
                     /locus_tag="VEV83_21280"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045148 - tripeptide aminopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HYK47731.1"
                     /translation="MIHGYQHTVAERFMRYVQIDTQSDPQSNSFPTTEKQKDLSNLLA
                     EELRTIGVADAHADEYGYVYASIASNSNKRVPVVCFCSHVDTAPDCSGTNVKPILHKN
                     YDGSDIILPDDATQIISATEYPYLRQHIGHDIITASGFTLLGADDKSGVAIIMDTVNY
                     LISHPEVKHGEIKILFTPDEEVGKGTVKVDLQKLNADVAYTMDGGEAGTFEDETFSAD
                     GVRITINGVISHPGYAKDKMVNALKIAGEILAALPKTELSPEVTAGREGFVHPVAVNG
                     IADKATIDFIVRDFQTANLAKHEERLRAIAEDVVKRYPKSTMQFNVTEQYRNMKEVLD
                     KNPQVVEKAKEAYQRSGLTVVNEPIRGGTDGSRLSFMGLPCPNIFTGMQAIHSRHEWI
                     GVKDMEKAVEVLVNLVQVWEESG"
     gene            1352..1903
                     /locus_tag="VEV83_21285"
     CDS             1352..1903
                     /locus_tag="VEV83_21285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47732.1"
                     /translation="MKKILVGSVVGGIIVFVLQFLSWVILDLQRPAQQYTPKQNEILS
                     YLSTQFDSSGGYFLPNNPPGASSDEQKKAMQDAMGKPWAQIYYHKTMDASMTMNMVRS
                     LITDIIIVMLFCWIISGYAANSFGKTFLAAIFTGLIVYLQASYTDHIWYETFDSGAHL
                     VNYLVTWAVLGIWLGWLLNRKKA"
     gene            complement(2001..2456)
                     /locus_tag="VEV83_21290"
     CDS             complement(2001..2456)
                     /locus_tag="VEV83_21290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK47733.1"
                     /translation="MLHAKQGDTVKVHYHGRLTDGSTFDSSEGRQPLEFEVGSGVVIK
                     GFDDGVTGMSVGEKKTVVIPADDAYGPRQEDMVIEFPRSNFPPDIEPEVGMTLNMHSE
                     DGNDLPVVITDISSDAIILDANHPLAGQDLVFDIELVDVKGKSPLIILP"
BASE COUNT          638 a          611 c          522 g          748 t
ORIGIN      
        1 gtgaaccttt taaccgcttt cttcccacac ctgcactaaa ttcacaagca cttcaaccgc
       61 tttttccata tccttcactc ctatccattc gtgcctgcta tgaatagctt gcataccggt
      121 gaaaatgttt ggacagggta aacccataaa acttaaacgg ctgccatctg tgcctccgcg
      181 aatgggttcg tttaccacgg taagccctga acgctgatac gcttctttgg ctttttcaac
      241 aacctgcgga tttttgtcaa gcacttcttt catattgcga tactgctcgg tgacgttaaa
      301 ttgcattgtc gattttggat accgttttac aacgtcttca gcgatcgcgc gcaatctctc
      361 ttcatgcttt gcaagattgg ccgtctgaaa atcacggacg ataaaatcaa ttgttgcttt
      421 gtctgcaatt ccattcacgg ccaccggatg cacaaaacct tcacgtcctg cagtgacttc
      481 cggactcaat tcggtcttgg gcaaagctgc taatatttcg cctgcgatct tcaacgcatt
      541 taccattttg tcttttgcat agccgggatg cgagatcact ccgtttatcg tgatacgaac
      601 gccatcggcg ctgaaagtct cgtcttcaaa tgtgcccgct tcaccaccgt ccattgtata
      661 tgccacatca gcatttagtt tttgaagatc gactttcacc gttccttttc caacttcttc
      721 gtcaggtgtg aacagtatct tgatctcacc atgcttaacc tcggggtgag agataagata
      781 atttactgtg tccattatta ttgcaacgcc acttttatcg tccgctccca ataaggtgaa
      841 accgcttgcc gtaatgatgt catggccaat atgctgcctg agatacggat actcggtggc
      901 agaaattatt tgggttgcat catcaggcag gatgatatcg ctgccatcat aatttttatg
      961 aaggatgggt ttcacattcg tgccgctgca gtccggtgcg gtatctacgt ggctgcagaa
     1021 acaaacaacc ggaactcgtt tattggaatt ggatgcgata cttgcgtaaa catagccgta
     1081 ctcgtctgca tgtgcatcgg cgacgccaat agttctcaat tcttcagcaa gcaagttgct
     1141 caggtccttt tgcttttctg ttgttggaaa tgaattgctc tgtggatcgc tttgcgtgtc
     1201 gatctgcaca tagcgcatga accgttcggc aaccgtatgc tgatatccgt gtatcatcac
     1261 ctttaatttt cggtaacaaa taaacagatt atccaaatca tttgtgcaga aataaattaa
     1321 tggctaattt ccatcgacca aaacagtcca aatgaaaaaa atacttgtag gttccgtcgt
     1381 aggagggatc attgttttcg tcttacaatt tctatcatgg gtaattcttg atcttcaacg
     1441 ccccgctcag cagtatacac cgaaacaaaa cgagatcttg tcttacttaa gcacacagtt
     1501 tgattcaagc ggcggatatt tcctgccaaa caacccgccc ggcgcatcga gtgacgaaca
     1561 gaaaaaggcg atgcaggacg cgatgggcaa gccttgggcg cagatctatt accacaaaac
     1621 catggacgct agtatgacaa tgaatatggt tcgcagtctt atcaccgata ttattatagt
     1681 aatgcttttc tgctggatca tttcaggata tgccgcaaat agttttggca aaacttttct
     1741 cgctgcgatc tttaccggtc ttatcgttta cttacaagcg tcatatacag atcacatctg
     1801 gtatgagacg tttgattccg gagcacacct tgtcaattac ctcgtaacct gggcagttct
     1861 tggaatatgg ctcggctggt tgttaaacag gaaaaaagct taaggatttt ctagggtcat
     1921 tgtttcggag ggtgattcat tcattcagta attgcaggta acattgaaac acctgaaatc
     1981 ggaatattgg aacatgacgc tcatggaaga atgatcagcg ggctcttacc ttttacatct
     2041 accagttcaa tgtcaaacac aagatcttgt cccgcgagcg gatgattggc atcaaggatg
     2101 atggcatctg agctgatatc tgtgatcacg acgggcaaat cattgccgtc ttcgctgtgc
     2161 atgttcaagg tcattccaac ttccggttcg atatccggag gaaaattact ccgcggaaat
     2221 tcgatgacca tatcttcctg gcggggaccg tatgcatcat ctgcggggat cacaacagtt
     2281 ttcttttctc ccacactcat acctgttacg ccgtcgtcaa agcctttgat caccacacca
     2341 ctgccgacct caaattcgag cggttgccgg ccttcactgc tatcaaatgt actcccatca
     2401 gtcagtcgtc cgtggtaatg aacttttact gtatcacctt gtttcgcgtg tagcatacat
     2461 tcttttttaa agattaattt atccgcgcaa aaaaagcacc aacattttgc agcgctgtc
//
LOCUS       DASQJI010000811         2660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2585155,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000811 DASQJI010000000
VERSION     DASQJI010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2585155"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VEV83_21295"
     CDS             <1..351
                     /locus_tag="VEV83_21295"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221729.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HYK47734.1"
                     /translation="CVSAGVHPRIMGIGPVAAVPKVLKQANMSLNDIDLIELNEAFAS
                     QSLAVIRELDFNPDIVNINGGAIALGHPLGCTGCKLTVQILNDMKRLNKKYGMVTACV
                     GGGQGIAGIIENIE"
     gene            518..763
                     /locus_tag="VEV83_21300"
     CDS             518..763
                     /locus_tag="VEV83_21300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47735.1"
                     /translation="MNCLLVKTWLLITLIIFSLARFGQNNLAPVFEIKNDTAVYQALD
                     NRYYEMLEDTTDKLTFEQVLREPVSSNFHYNKSSLND"
     gene            839..979
                     /locus_tag="VEV83_21305"
     CDS             839..979
                     /locus_tag="VEV83_21305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47736.1"
                     /translation="MRTSPAHSVRKNGNGIPQNIIDKIFQPFFTTKPTGQGTGLSLSY
                     VL"
     gene            1095..1214
                     /locus_tag="VEV83_21310"
     CDS             1095..1214
                     /locus_tag="VEV83_21310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HYK47737.1"
                     /translation="MVQTIYDITKAHGREIKTEPMEREGGKFIIYLPYLNKKY"
     gene            1224..>2660
                     /locus_tag="VEV83_21315"
     CDS             1224..>2660
                     /locus_tag="VEV83_21315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018625981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47738.1"
                     /translation="MKEKSLFIVFTFLLAYSIGWGQRNLTDSLRAVINLQKGDTAEVN
                     TLAYLANEQIQVDSVIKYAQQGSVLAKKLNYREGEADCLFVLGLKSTDFGLSIRNVLG
                     ALNIYEGLHDNQGTASSYLVLQAQYWNAARDYEKALNYAFLGEKIAEANNVIGGRFNF
                     PRHRLAPLFLAEIGQIYVLRNQLDSALIYTQKAIDYNELFNGAQWNFPVYLLATIQTM
                     QGNYNAALENYRSAIPLAVQNDFLRDTLQIFSGMSTLFKKTAQLDSAIYYAQIVATSW
                     NAESEIKNLLEAVTNLATVYKMKKEKDSAIKYIELSYFLKDSLLSVKNDREIQSISFN
                     EQLKQEKLASEQAKYENRIQLYATIAGLLIVLLIAGILWRNNIHRQKAYALLKKQKAE
                     TDHQKAKAENALEELKSTQAQLIHSEKMASLGELTAGIAHEIQNPLNFVNNFSEVNKE
                     LLAEMKNEMDNGNIEDAKAIANDVIDNQG"
BASE COUNT          919 a          471 c          559 g          711 t
ORIGIN      
        1 tgcgtatctg ccggcgtgca tccgaggatc atgggcatcg ggcctgttgc ggcggtacca
       61 aaagttttga agcaggcgaa tatgagtttg aatgatatcg atctcattga actgaacgag
      121 gcattcgcgt ctcaatcatt agcagtaata cgagagcttg actttaatcc agacatagtg
      181 aacattaacg gcggggccat tgcactcggt catccgctgg gttgcaccgg ctgcaaactc
      241 actgttcaaa tattgaacga catgaaacgc ctcaataaga aatacgggat ggttacagca
      301 tgtgtaggag gtggacaggg aattgcggga atcattgaga atattgagta actaaagcag
      361 gtcatcctcg acactgttgt cccagggaaa cagtgttagt agataaggca aaagtcaaaa
      421 taaacggtca ggcgctttcg gagcgtcaga ccgataacct atgaaagagt aaaagcaaac
      481 ggagtatatt tactcagcaa ttgccaatac gcatccaatg aactgcctgc tcgtaaaaac
      541 ctggctcctt attaccctta tcatattttc ccttgccagg tttggtcaaa ataatttagc
      601 tcctgttttc gaaataaaga atgataccgc ggtatatcaa gcgctggata acaggtatta
      661 tgaaatgctc gaagacacaa ctgataagtt aacttttgaa caggtgttgc gagaaccggt
      721 gtcgagcaac ttccattaca acaaatcgtc attgaatgat tgaacaacaa aaaattgagc
      781 ttgaaaagac cgttgaggaa aggacaagtg aattaaagca ttctttttac gaactcaaat
      841 gcgcacaagc ccagctcatt cagtcagaaa aaacggaaac ggcattcccc aaaatatcat
      901 tgataaaatc tttcagccat tctttactac caaaccaact ggtcagggta cgggtttgag
      961 tttgagttat gtattgtgaa ggcgcatgga ggtgagataa aagtagaaac gaaggaagga
     1021 aaaggcgcga attattattc aattaccggt tacataaagg ctctaatcat ggcaatcaat
     1081 aaatcttata aatcatggtt cagacaattt atgacattac aaaagcgcat ggccgtgaaa
     1141 taaagactga gccaatggaa agagaaggag gtaagtttat tatttaccta ccctatctga
     1201 acaaaaagta ttaaactgtt ttaatgaaag aaaaatcctt atttattgtt tttactttcc
     1261 tcttagctta tagcattggc tgggggcaaa ggaacctgac agatagtttg agggccgtta
     1321 taaacctcca aaagggcgat acagcggaag taaatacttt agcttattta gccaatgaac
     1381 aaatacaagt tgattcggta attaaatacg cacagcaggg atcagtgtta gcaaaaaaat
     1441 tgaattacag agaaggcgaa gctgattgcc tgtttgtttt aggactaaaa tctacggatt
     1501 tcggcctaag tatccgaaat gttttaggtg ctctaaatat ttatgaaggg cttcatgata
     1561 accagggtac cgcttcttca tatttagttt tgcaggctca atattggaac gctgcaagag
     1621 attatgaaaa agctttgaat tatgcctttt taggagagaa aatagcggaa gccaataacg
     1681 ttattggggg tagatttaat tttccacgtc atcggctggc acccttgttt ttagcggaga
     1741 ttggtcagat atatgtgctc aggaatcaac tggactctgc tttgatctat acacaaaaag
     1801 caatcgatta taatgaactt tttaatgggg cacaatggaa ttttcccgtt tatcttttag
     1861 ctactataca aactatgcag ggaaattata atgctgccct ggaaaattat cgttcagcta
     1921 taccattggc tgtacaaaat gattttctta gggatacgtt gcaaatattc agtggtatgt
     1981 ccacactctt taagaaaaca gctcagttag attcggctat ttattatgca caaatagttg
     2041 caacatcctg gaatgctgaa tctgagatca agaatttact tgaagctgta actaacctgg
     2101 caactgttta taaaatgaaa aaagagaaag acagtgctat taaatatatt gaattaagct
     2161 attttttaaa agacagcctg cttagtgtaa aaaatgatcg tgaaatacaa agtattagtt
     2221 tcaatgaaca gctaaagcaa gagaagcttg catcagaaca ggcaaaatat gaaaacagga
     2281 tacagttata tgcaactatt gcgggattac ttattgtctt gcttattgca ggtatacttt
     2341 ggcgcaataa cattcaccgg caaaaagcgt atgccttatt gaaaaaacaa aaagcagaaa
     2401 ctgatcatca aaaagcaaaa gccgaaaatg cactggaaga attaaaatca acccaggccc
     2461 aactcataca ttcagaaaaa atggcctcgc ttggagaact tactgcaggc attgcacatg
     2521 agatacaaaa cccgttaaat ttcgtgaata attttagtga agtgaacaaa gaattacttg
     2581 cagaaatgaa aaatgaaatg gacaacggaa acatcgaaga tgcaaaagca attgccaatg
     2641 acgtaataga caaccaggga
//
LOCUS       DASQJI010000812         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_587050,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000812 DASQJI010000000
VERSION     DASQJI010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587050"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VEV83_21320"
     CDS             complement(<1..1092)
                     /locus_tag="VEV83_21320"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HYK47739.1"
                     /translation="MSKIPVIAIFDVGKTNKKLFLFDEQYKLVQEESQAFEETKDEDG
                     FPCEDIEALSTWVLKKFREVSLMDDFKILGVNFSAYGASLVYLNDYRKPVTPLYNYLK
                     PFPEKLKKQFYDTYGGESVIAKQTASPVLGSLNSGLQFYRLKYEKPDIYHQVKYALHL
                     PQYLSFIISSRTASDITSVGCHTHLWDFKKHKYHQWVYKEEMRTKFPPIYRGDKTMSI
                     VNDARKIPIGIGLHDSSAALIPYLASFSEPFILLSTGTWCITLNPFNHSLLSDYELDQ
                     DCLCYLSYEGKPVKASRLFAGYEHEQEVKRLADHFNTSNDYYKKVTYDSRLVKNFQGV
                     SKSHRLSDDTAIVQQSAFKERDLADFSGYE"
     gene            complement(1308..>2305)
                     /locus_tag="VEV83_21325"
     CDS             complement(1308..>2305)
                     /locus_tag="VEV83_21325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HYK47740.1"
                     /translation="HIPWDIPEDAANIRSLAAQNGLKFDAMNSNTFQDQPGQQYSYKF
                     GSMQHVDKAVRQQAIEHNIEVIKYGVELGSESLTVWLSDGSSFPGQLNFRKAFQNTLD
                     SLQEVYAALPANWKIFIEYKASEPNFYSTTVGDWGQSLLYATKLGDKAYTLVDLGHHL
                     PNANIEQIVALLLMEKKLGGFHFNDSKYGDDDLTVGSIKPYQLFLIFNELVEGMDARQ
                     MNHATDLAWMIDASHNIKDPLEDLLQSVEAIMITYAQALLVGRKKLAEAQNNNDVVTA
                     QEILQNTFRTDVRPLVAEARLRAGGALDPLSVYRKEKVRQALIKERGSKTVATGL"
BASE COUNT          604 a          523 c          474 g          704 t
ORIGIN      
        1 ttcataaccg gagaaatcgg cgagatcacg ttccttgaat gccgattgct gaacgattgc
       61 cgtgtcatcg ctgagcctgt gagatttcga tacgccctga aaatttttaa cgagcctgct
      121 atcgtacgtt actttcttat aataatcatt tgaggtattg aaatgatcgg ccaaacgttt
      181 tacctcttgt tcatgttcat aaccagcaaa caatcgcgaa gcttttacag gtttgccttc
      241 gtaactcaaa tagcacaaac aatcctggtc cagttcatag tcgctaagca aagagtgatt
      301 gaagggattc agggtgatgc accaggtgcc tgttgatagt aaaataaacg gttcgctaaa
      361 ggaagccaga tacggtatta acgcagcgga gctgtcgtgc agaccgatac cgatgggaat
      421 ttttctggcg tcgttcacga tgctcatcgt tttatcccca cgatagatcg gaggaaattt
      481 cgtgcgcatc tcttccttgt atacccattg atgatatttg tgctttttga aatcccacag
      541 atgcgtgtgg catcctacac tcgtaatgtc tgacgctgtt cttgaagaaa tgatgaaact
      601 taaatattgc ggaaggtgca aagcgtattt gacctggtga taaatatccg gcttttcata
      661 tttcaacctg taaaattgca aacctgaatt caggctccca agcaccggtg aggcagtttg
      721 ttttgcgata acgctttcgc cgccgtatgt atcgtagaat tgttttttta atttttcggg
      781 aaaaggtttt agataattgt ataatggcgt aaccggcttt cgataatcgt tcaggtaaac
      841 gaggcttgcg ccgtaagcgg aaaagtttac gcccagaatt ttgaaatcgt ccattaaaga
      901 gacctcccga aacttcttca acacccaggt gctcaacgcc tcaatgtctt cacatggaaa
      961 gccatcttca tctttcgtct cttcaaatgc ctgcgactct tcttgcacca atttatactg
     1021 ttcatcaaac agaaataatt tcttattggt tttaccaaca tcaaaaattg ctatgacggg
     1081 aattttgctc atgagctcct gaagcccccg tcccctaaag gggagtaatt agatttcgct
     1141 aatagaattt tgtgtgctgc cccttcgatg tatcttaaag ccacgggatc aaattgttta
     1201 aagcgcccct ggcattctac gcgaaataaa ttttcaaaac caactctata catttttcgt
     1261 agaaataaaa attgagacga ggtttgcaac tccctttagg gtcggggcta caatccagtg
     1321 gctaccgttt tactgcctcg ctcctttatt aaagcctgtc tcactttttc ttttctgtaa
     1381 acggacaaag ggtctaatgc cccgcccgca cgtaaccttg cttctgccac aagtggacga
     1441 acatcagtgc gaaatgtatt ttgcaggatt tcctgtgcag ttaccacatc gttattgttt
     1501 tgtgcttcgg ccagtttttt tcggcccacc aataacgcct gcgcatatgt tatcatgatg
     1561 gcctcaaccg attgcaaaag atcttcgagc gggtccttta tattatgcga agcatcgatc
     1621 atccatgcaa ggtctgttgc gtgattcatt tgtcttgcgt ccatgccttc gaccagttca
     1681 ttaaaaatca ggaacaattg atacggtttt atactgccaa cagtgagatc atcatctccg
     1741 tatttagagt cgttaaagtg aaatccaccc agcttttttt ccattaataa caacgcaacg
     1801 atctgttcaa tatttgcgtt gggcaagtga tggccaagat cgacgagcgt gtatgcttta
     1861 tctccaagtt tggtcgcata caacaacgac tgtccccaat caccaactgt tgttgaatag
     1921 aaatttggtt cgctggcctt gtattcaata aatattttcc agtttgccgg aagcgccgca
     1981 taaacttcct gcaaactgtc caacgtattt tgaaacgctt ttctaaaatt cagttgccct
     2041 gggaaagaac tgccgtcact gagccaaact gtgagcgatt cagaacccaa ctccactccg
     2101 tatttaatta cttctatatt atgttcgatg gcttgttggc gaactgcttt gtcgacgtgc
     2161 tgcatagagc caaatttgta actgtactgc tgcccaggct ggtcctgaaa agtgttggag
     2221 ttcatcgcgt cgaacttcaa accattttgt gcggcaagtg atctaatgtt tgctgcgtct
     2281 tccggaatat cccatggaat atgta
//
LOCUS       DASQJI010000813         3678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2739075,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000813 DASQJI010000000
VERSION     DASQJI010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2739075"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /gene="hemE"
                     /locus_tag="VEV83_21330"
     CDS             <1..981
                     /gene="hemE"
                     /locus_tag="VEV83_21330"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HYK47741.1"
                     /translation="VQRPPVWMMRQAGRYLPDYIKLREKYDFFTRVQTPELAAQITLQ
                     PVDQVGVDAAIIFSDILVIPQAMGLEVLMEEGKGPSLPATIKTNSDIDALNTANAAEH
                     LNYVLEAIALTKKELNGRVPLIGFAGAPWTILCYMIEGKGSKTWDKAKQFAYTEPWLA
                     HTLLQKITDITIDYLKAQVEAGADTVQVFDSWAGSLSPADFKSFAQPYLIKIANALNG
                     TAPVILFPKGSWYALKELSQSSAAGIGIDWTITPACGRSLTNNNITLQGNFDPAKLLA
                     PIPLIKKWVKEMVAEFGTQNYIANLGHGITPNVPVDHAKAFVDAVKECEL"
     gene            1141..2115
                     /gene="hemF"
                     /locus_tag="VEV83_21335"
     CDS             1141..2115
                     /gene="hemF"
                     /locus_tag="VEV83_21335"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HYK47742.1"
                     /translation="MGTAIHNSQFTIHTVKQTWVNYIHDLQDRICHALEQADAKAKFI
                     EDAWNRPEGGGGKTRVIANGHVFEKGGVNTSVVYGKVTDAMRTALKLAPSGRTESGWF
                     ACGLSLVIHPVNPFVPTVHCNYRMFELYAENGDVTDRWFGGGTDLTPYYLFEEDAKHF
                     HRVYKNVCDQFDENFYPVFKKNCDDYFVNTHRNNERRGIGGIFYDYRKADENHDVDFW
                     VRFGKACGDAFITAYLPIVEKRKDNRYTPENKHWQEIRRGRYVEFNLIHDRGTLFGLK
                     TNGRTESILMSLPPTVRFEYDYQPARGSEEDKLLQVFLQPREWVEAEG"
     gene            2258..2563
                     /locus_tag="VEV83_21340"
     CDS             2258..2563
                     /locus_tag="VEV83_21340"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK47743.1"
                     /translation="MHRFSAGFETAKQLIRAAGSVGSNYRATARSKSDADFIHKIEIV
                     LEEADESHYWLQIVKEAKLRTGDEVDWLIDEANQLTAIFAAADKTAKANKRKNIGFK"
     gene            2710..>3678
                     /gene="hemB"
                     /locus_tag="VEV83_21345"
     CDS             2710..>3678
                     /gene="hemB"
                     /locus_tag="VEV83_21345"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HYK47744.1"
                     /translation="MFLPRRPRILRANPSIRRMVAETVLTPNDFIVPLFIDEGENVQM
                     EIASMPDYYRRSIDLTVKEVKEIWDLGIKSVLLFIKCKDELKDNTGKEAWNPDGLMQR
                     SIKAIKDAVPEMYVMTDVALDPYSSYGHDGIVENGEIVNDPTVEALVKMSISHAEAGA
                     DMVAPSDMMDGRIGAIRKGLEENNFTKVGIMAYSAKYASCFYGPFRDALDSAPGFGDK
                     KTYQMDYCNRLEAVKEALMDVEEGADIVMVKPGLPYLDIVREVKNAVNVPVSVYNISG
                     EYAMIKAAAKMGWIDESKAIMETLTSIKRAGASLIATYFAKEAASMM"
BASE COUNT         1078 a          728 c          959 g          913 t
ORIGIN      
        1 gttcagcgcc cgcctgtttg gatgatgcgg caggcaggca gatatttacc ggactatatt
       61 aagctgcgcg agaaatacga tttctttacg cgggttcaaa cgcctgagct cgcagcacag
      121 atcactttgc agccggttga ccaggtgggt gtagatgcgg ccattatttt ttcagatatt
      181 ttggtgatac cgcaggcaat gggtcttgag gttttgatgg aagaagggaa agggccttcg
      241 ctgcccgcca caataaagac aaatagcgac atcgatgcat taaacaccgc aaatgctgct
      301 gaacatctca actacgtttt agaagcgatt gcacttacaa aaaaggaatt gaatgggcgt
      361 gtgccactga tcggttttgc gggcgctccc tggacgatcc tttgttacat gatcgaaggg
      421 aaaggcagca agacctggga taaggccaaa caattcgcgt acacggagcc ttggttggcg
      481 cacacgcttt tacaaaagat cactgatatc acgatcgact atttgaaagc acaggttgaa
      541 gcaggggccg acacggtgca ggttttcgac agttgggctg gttctctatc cccggctgat
      601 ttcaaaagtt ttgctcagcc gtatctgatt aaaattgcca atgcgctaaa cggtaccgcg
      661 ccggtcatat tgtttccaaa gggaagctgg tatgcgttga aggagttgag tcaaagcagt
      721 gccgcaggaa ttggtatcga ctggacgatc acgcctgcat gcggaagatc actgacaaat
      781 aataatatca cgttgcaggg aaactttgat cctgcgaagt tgcttgcgcc aattccgttg
      841 ataaagaaat gggtaaaaga aatggtggca gaatttggta cgcagaatta catcgcgaat
      901 ctcgggcacg gcatcacgcc gaatgttcca gttgatcatg cgaaggcgtt tgtggatgcg
      961 gtgaaggagt gtgaattgtg aattgtgaat gagacgctgc ggcggtggcc ggtttttaat
     1021 ttgccggact gcggaggatt tttttacgct gataaagttc gtagggcaga ggcccagcaa
     1081 cccgttgatt atttcaaatt ttataaaact tacctgttcg atttaaagta aggtccttgt
     1141 atgggaacag ccattcacaa ttcacaattc accattcaca ccgtcaaaca aacgtgggtc
     1201 aactacatcc acgacctgca ggatcgcatc tgccacgcac tcgagcaggc tgacgcaaaa
     1261 gcaaagttta ttgaagacgc ctggaatcga ccagaaggcg gcggcggcaa aacacgagtg
     1321 atcgccaacg ggcatgtatt tgaaaaagga ggtgtgaaca cttcggttgt gtatggaaaa
     1381 gttactgatg caatgcgaac tgctcttaaa cttgctccca gcgggaggac agagagcggc
     1441 tggtttgcat gcgggctgtc gttggtcata catccggtca atccttttgt gccgactgtt
     1501 cactgcaatt atcggatgtt tgaactgtat gctgaaaatg gcgatgttac cgaccgctgg
     1561 tttggtggtg gaaccgatct aacgccttat tatttatttg aagaagacgc aaaacatttt
     1621 caccgcgttt ataaaaacgt gtgcgatcaa ttcgacgaaa atttttatcc cgtattcaaa
     1681 aagaattgcg atgattattt cgtcaacaca catcgcaaca atgaacgtcg tggtattggc
     1741 gggatttttt atgattatcg aaaagcggat gaaaaccatg atgtcgattt ttgggtcagg
     1801 ttcggaaagg catgtggcga tgcattcatc actgcttatc ttccgatagt cgaaaagaga
     1861 aaagacaata gatatacacc ggaaaacaag cattggcagg aaataagaag aggccggtac
     1921 gttgaattca atttgataca cgacaggggc acattgtttg ggctgaaaac aaatggaaga
     1981 accgaaagca ttttgatgag cctgccgccg acggtcagat ttgagtacga ctatcaacct
     2041 gcacgcggaa gtgaagaaga taaattgtta caagtttttt tgcagccgag ggaatgggtg
     2101 gaggccgagg gctgatctcg gatctctgat ctcggatctt tgatctctga tatacgttgt
     2161 actgatttcc gacatttttc aactctgaaa atataactat ggacagaaag gaattacaaa
     2221 aaagaacgcg tgattttcat gtggcaatca tcaaactgtg caccgatttt cagccggatt
     2281 tgaaaccgct aagcaactga tacgggccgc cggttctgtc gggtcaaact accgtgcaac
     2341 ggccaggtca aaatcagatg cggactttat tcacaagata gaaatcgtat tggaagaagc
     2401 cgacgagagt cattactggc ttcaaattgt aaaggaagcg aagttgagaa caggtgacga
     2461 ggtggattgg ttgattgatg aagcaaatca attaacagca atctttgccg cagcggacaa
     2521 aactgcaaaa gcaaacaaaa gaaaaaatat aggattcaaa tgaagagaat ctgtgatgta
     2581 tgatctctga tctctgatct ccgatctctg gcctgcctca ggaccatcaa agatcagcgg
     2641 agcagcagat cagacatctt tagatcagag atcagagatt ttcaagtttg catcattaaa
     2701 tcagaacaaa tgtttttacc acgacgtcct cgcatactac gggcgaatcc atctatccgc
     2761 cggatggttg ctgaaacggt gcttacgcca aatgatttta ttgttcctct gttcatcgat
     2821 gaaggtgaga atgtacaaat ggagattgca tcgatgccgg attattatcg aaggagtatc
     2881 gatctcaccg ttaaagaggt aaaagaaata tgggaccttg gcataaagag cgtgttgctt
     2941 tttatcaaat gcaaagatga attgaaggat aacactggca aggaagcatg gaatcctgat
     3001 ggactaatgc aacgaagcat taaagcaatt aaagacgccg ttccggaaat gtatgtgatg
     3061 accgatgtag ctcttgaccc ttattcgtcg tatggccatg acggaatagt agagaacggc
     3121 gaaattgtaa atgatcccac cgttgaagcg ttggtaaaga tgagcatctc acacgccgag
     3181 gccggcgctg acatggttgc tcccagcgat atgatggacg gacgcatcgg cgcgatcagg
     3241 aaaggccttg aagaaaataa ttttacgaag gttgggatca tggcatacag cgcaaaatat
     3301 gcgtcttgtt tttacggccc cttcagagat gcattggaca gcgcgccggg ttttggcgat
     3361 aaaaagacat atcaaatgga ttattgtaac agattagaag ctgtgaagga ggcgctgatg
     3421 gacgttgaag aaggagcaga tatagtaatg gtcaagccgg gtttacctta tctcgatatt
     3481 gtgcgggaag taaaaaatgc ggtgaatgtt ccggttagtg tctacaatat cagcggtgaa
     3541 tatgcgatga taaaagctgc ggcgaagatg ggctggattg atgagagcaa agcaattatg
     3601 gaaacactca catccataaa acgagccggc gcaagtttga tcgcaacgta ctttgcgaag
     3661 gaggcggcga gcatgatg
//
LOCUS       DASQJI010000814         6894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1970919,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000814 DASQJI010000000
VERSION     DASQJI010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6894
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1970919"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..691)
                     /locus_tag="VEV83_21350"
     CDS             complement(<1..691)
                     /locus_tag="VEV83_21350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HYK47745.1"
                     /translation="MLGLLSLIAAIVMAATENITAAGPFLIGFFLALAIGFRGSALLK
                     GLSFTVTIFAAVTTALYYPNYFVDINGFKLSSLITPLLQLIMFGMGTSMSFKDFAGVI
                     KMPRGVLIGVGSHFLIMPLIGFTLASFSHFPPEIAAGIVLVGCSPNGMASNVISYLAK
                     ANLALSVTITAISTSLAPFVTPLLMKLLAGAFIEIHPLAMMLDILKIVIIPVGAGLIF
                     NHFVSGKVKWLD"
     gene            926..998
                     /locus_tag="VEV83_21355"
     tRNA            926..998
                     /locus_tag="VEV83_21355"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:959..961,aa:Lys,seq:ctt)
     gene            1109..1837
                     /locus_tag="VEV83_21360"
     CDS             1109..1837
                     /locus_tag="VEV83_21360"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding family 9-like protein"
                     /protein_id="HYK47746.1"
                     /translation="MNTVNLQSTPQLCASSPTIISGIQRSFSDTIGEGIWKIKYSTDF
                     TITGDGSADNWSGTDWLTLPLCSGNAVTYQTKIKLLYSDSGIYCLYYCEDNKITATMK
                     EDFLDLWHEDVVEAFFWTDETAPVYFEYELSPLNYELPLLVPNMNGKFLGWRPWHYEG
                     DRRTKHATHISKNQTGVEAWTAEFFIPYTLLTPLMNVPPRNGTRWRANFYRIDHDSGE
                     ATWQWQKVPGTFHHYEKFGTIVFD"
     gene            complement(1948..2556)
                     /locus_tag="VEV83_21365"
     CDS             complement(1948..2556)
                     /locus_tag="VEV83_21365"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpW family outer membrane protein"
                     /protein_id="HYK47747.1"
                     /translation="MKKFIIASLIIALFSSPGFSQRNLFGVGWEVNFPNNDGYVTKTS
                     YSGGKLDYRHFIQHKNLSFGLAINWCTYEQHIPRQTFVSEDGNSALTSDFVAQVYQVP
                     MTATLHYYFSESKMLKPYVGVGLGAQYLDQSLYYNVYISDENNWGFVARPELGIYLTP
                     KNSHNWGIWLAANYSYATNEFGVLNNNSFQNFGLTLGAAFWQ"
     gene            complement(2578..3192)
                     /locus_tag="VEV83_21370"
     CDS             complement(2578..3192)
                     /locus_tag="VEV83_21370"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HYK47748.1"
                     /translation="MKKLFLFLPIISLAFFACRKLPDTGALSVSFAVSTAKNADADFG
                     SYKTYSMSDTIKLRSTNPKDTVWDDADAQRLINQVKQNLEARGYTFVGHSTIPDIGIG
                     FTAVKDLNVGVVYPGWWWGYWGCYWYYCGYPPYYGYGQIYSIPTGTLILDMIDLKNAN
                     ANQRLDVIWSSVMTGGLGYTNDDIDLGIEAVDQSFTQSPYIQTH"
     gene            complement(3312..4436)
                     /locus_tag="VEV83_21375"
     CDS             complement(3312..4436)
                     /locus_tag="VEV83_21375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47749.1"
                     /translation="MKRELILLLCCCSVVYSSAWSQYTTDKVVGQKNEALIDSLKTAD
                     YPYLLPIWGKKVAQKGFKLPKSAGLSVQYLWQQSQITINNLQVGFNNGPLYNLDEIVR
                     FDKAQTTTNGVNVRPDIWILPFLNVYAVFASSKTSTAINAGVWIPDSSTWNKIATIDT
                     KADFNATTFGFGMTPTVGVGGFFMALDMNLTWSDIAELEKPAFAFVFGPRIGKNITWA
                     NHPDKCLAIWAGGFRVKLNTGTTGSLSTAELFPTEEWGAKIDTGYMQVAESQQEVNEW
                     WEGLTPLEQQNPVNKAKYNTANAALETFGNVLDAASQAVTNAGSSTVQYSLDKKPKDM
                     WNFIIGSQFQLNRSWMIRAEYGFLGSRSQLIAGLQYRFNF"
     gene            4936..5961
                     /locus_tag="VEV83_21380"
     CDS             4936..5961
                     /locus_tag="VEV83_21380"
                     /inference="COORDINATES: protein motif:HMM:NF016241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HYK47750.1"
                     /translation="MKKLMLLSLVPVLMHKAFSQEQKDTIFFTNGTMVIGEVNKIKLG
                     VISFDPDDANDITVQLRKLKTIAATSKLFRIETVGNHVFHGKLIPYRINNYAQLVSDV
                     DTILLFLQDISVMYPYDKRFIQRFSGNVGLGYSYTRSSDFGRLNFDGTVRYVSDESEL
                     SLSTSGIYTMTDSSVTRDNESFALKDNYYFSPTWFGTAFLAYQRNLELGLDRRFQEGL
                     GAGNKFIRSKHVYAWARTGFVFNQEKSSEDIQTGTLTEIFGQLQFNLFRFTKPEINFD
                     MSQTFYYNLSQNGRFRNDGEMNLNWEIIDDLNLNLGFYNNYDNQPPVEGSRKLDFGVV
                     FGINYSF"
     gene            complement(6700..>6894)
                     /locus_tag="VEV83_21385"
     CDS             complement(6700..>6894)
                     /locus_tag="VEV83_21385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47751.1"
                     /translation="RYGSSGYYTEDKTYYVETNFYSLTEGKLLWSGTTSSLNPSKLDR
                     TLDDIINTLKAQLQSQGLVK"
BASE COUNT         1984 a         1489 c         1468 g         1953 t
ORIGIN      
        1 tgtcgagcca ttttacttta ccgctgacaa aatgattaaa gatcagtcct gcgcccacag
       61 ggatgatcac gatcttcaaa atatcaagca tcatagcaag cggatgtatt tcgatgaaag
      121 caccagccaa taatttcata agtaaaggcg taacaaaagg cgcgagcgat gttgatatgg
      181 ccgtgatcgt aacagaaagt gcaaggttcg ctttagccag gtaagagata acatttgatg
      241 ccattccgtt tggcgagcat ccaaccaaaa caattccggc ggcaatttcg ggcggaaagt
      301 ggctgaagct tgcgagcgta aagccaataa gcggcatgat cagaaagtgg ctgcctacac
      361 ctatcaaaac gccgcgcggc attttgatca cacctgcaaa atctttaaag ctcatcgatg
      421 ttcccatgcc aaacatgatc agttgcagca atggcgttat tagcgatgaa agtttgaaac
      481 cgtttatatc aacaaaataa tttggataat acagcgcggt cgtaactgcc gcaaaaatgg
      541 tgacggtgaa agacaatccc tttaacaaag cggaaccgcg aaagccgatc gccagtgcca
      601 gaaagaagcc gatcaaaaaa ggaccggctg cagtgatgtt ctcggtcgcc gccatcacga
      661 tcgcagcaat taaagacaat aatcccagca ataatattat tttataagca ttgattttca
      721 gcggtgaaaa atttagtccg caaaatacag taatcaatta tttttgcagc ccttattaat
      781 tgactctgta gctcagttgg tagagcatcc cgattctgat cgggagggtc cagggttcgg
      841 gaaaatatta attgactcta tagctcagtt ggtagagcat cccgattctg atcgggaggg
      901 tctagggttc gggaaaatat taattgactc tgtagctcag ttggtagagc agctgactct
      961 taatcagcgg gtctagggtt cgagtcccta cagggtcaca aaggttggca ataaaatgcc
     1021 aacctttgtg tttaatagtt gcaccagttt acatttcgtt ttccatatga gtaactattt
     1081 cttaccatgc ttccttttca gttgtttcat gaacactgtc aatttgcaat caacgcctca
     1141 actgtgcgca tcgtctccaa cgatcataag tggcatacaa cgatcattca gtgacacgat
     1201 tggtgaagga atatggaaga tcaaatattc tacggatttc acaattaccg gcgacggcag
     1261 cgctgacaac tggagtggca cggattggtt gacattgcct ttatgcagcg gcaatgctgt
     1321 cacttatcaa acaaaaataa aattgcttta ttccgattcc ggtatctact gcctgtacta
     1381 ttgtgaagac aacaaaataa cagctacaat gaaagaagac tttcttgacc tctggcatga
     1441 ggatgtagta gaagcttttt tttggacgga tgaaactgcg cctgtttact tcgaatatga
     1501 attgtcgccg ttgaattatg aattacctct tttggtgccc aacatgaacg gaaagttttt
     1561 aggatggcgg ccctggcatt acgaaggcga ccgcagaacg aaacatgcaa cacacataag
     1621 caagaaccaa actggcgtgg aggcctggac tgcagaattc tttattccat atacattgct
     1681 tactccactg atgaatgtac ctccccgaaa cggtacgcgc tggcgggcaa atttttaccg
     1741 aatcgatcat gacagcggcg aagccacctg gcaatggcaa aaagtaccgg gaacctttca
     1801 tcattatgag aaattcggca ctattgtttt tgattaaaag aatgtttcgc taaagattct
     1861 tcgtgaaaga aaaaaggctg gtgaactgca ccaaccttct cgctttcatt ctggtgagat
     1921 acttctttcc gttcttaacc aactcaacta ttgccaaaac gccgcaccca acgtaagccc
     1981 gaaattctgg aagctgttat tattaagaac gccgaactcg ttcgttgcat aactatagtt
     2041 ggcggccagc cagatgcccc aattgtgaga atttttaggc gtcaaataga tgcctaattc
     2101 cggccttgca acaaatcccc agttgttttc gtcgcttatg tacacattat aatataacga
     2161 ttggtcgagg tattgtgcgc caagtccaac acccacatac ggttttagca ttttcgattc
     2221 gctgaaataa taatggagag tagcggtcat cggcacctgg taaacctgtg ccacaaaatc
     2281 actggttagt gcgctgttac cgtcttcact tacgaaggtt tgccgcggaa tgtgctgttc
     2341 gtaggtacac cagttaattg ccagcccaaa cgagagattt ttgtgttgaa taaaatgccg
     2401 gtaatccaat ttgccaccag agtaactcgt cttcgttaca tacccatcat tgtttggaaa
     2461 atttacttcc cagccgacgc caaacaaatt gcgctgagaa aaaccaggag acgaaaagag
     2521 agcgattatt aaagaggcta tgataaattt tttcattggt aaaaatttag agttcgatta
     2581 atgtgtttga atgtaaggcg actgtgtgaa cgactggtca accgcttcga tgcccaggtc
     2641 aatgtcatca ttggtataac caagcccacc cgtcattact gaactccaga taacatctaa
     2701 tctttggtta gcattcgcat ttttcaaatc gatcatgtca agtataagcg ttcccgttgg
     2761 tatgctgtat atctggccat agccatagta tggaggataa ccgcaataat accaataaca
     2821 tccccagtag ccccaccacc agccgggata gactacaccg acgttcaagt ctttgaccgc
     2881 tgtaaaacca atgccaatgt cgggtatagt gctgtgcccg acaaacgtat aaccacgcgc
     2941 ttcgaggttt tgttttacct ggttgatcag gcgctgcgcg tcagcatcat cccatactgt
     3001 atcctttggg ttcgtgctcc tgagcttaat ggtatccgac atcgagtaag ttttgtagct
     3061 gccaaaatcc gcatcggcat ttttcgcagt tgacactgca aaactcacgg acaaagcacc
     3121 ggtgtcaggc aactttctgc acgcaaaaaa tgctaaggaa atgattggga ggaaaagaaa
     3181 tagttttttc atttgtgaga ttttgatgaa tgatcttttg gaaataagcc gcaattcgcc
     3241 aggtcaactt tttcgttaag actttcccga ttgcgaatat gctgcatata taaagtcgtt
     3301 ttaaattggt tttagaaatt gaacctgtat tggagaccgg ctatcagttg gctcctgctt
     3361 ccaaggaaac cgtattcagc acgtatcatc caactcctgt tgagctggaa ttgcgagcca
     3421 ataataaaat tccacatgtc tttcggcttc ttgtcgagtg aatattgaac ggtcgaactg
     3481 cccgcatttg ttacggcctg cgacgccgca tccagcacgt tcccgaaagt ttcaagtgca
     3541 gcgtttgccg tattatactt ggctttattc accgggtttt gctgttcaag tggcgtaagg
     3601 ccttcccacc attcattcac ctcctgctgg ctctcggcaa cctgcatata ccctgtgtca
     3661 atttttgcac cccattcttc tgttggaaat aactcagctg tgcttaaaga accagtcgtg
     3721 ccggtattca atttcaccct gaatccgccg gcccagatcg cgaggcactt gtcaggatga
     3781 tttgcccacg tgatattttt tccgatccgt gggccaaata caaacgcaaa agcaggtttc
     3841 tccagttcgg caatatcaga ccaggtaagg ttcatatcga gagccatgaa aaagccacca
     3901 acaccaactg ttggcgtcat accaaatcca aaggtcgtgg cattgaaatc agcctttgta
     3961 tcaatcgtcg ctattttatt ccacgtgctg ctatccggta tccaaacacc tgcattgatg
     4021 gcggtagaag tttttgaact tgcaaacacc gcatacacat tcaggaaggg aagtatccag
     4081 atatcaggcc ttacgtttac gccatttgtt gtcgtttgcg ctttatcaaa tcttactatt
     4141 tcatcgaggt tatacaacgg cccgttatta aatccaacct gcagattatt gatcgtgatt
     4201 tgtgattgct gccataagta ttggacgctc aaaccggcag acttaggaag tttgaaacct
     4261 ttttgcgcga ctttcttacc ccagatgggc agcaggtaag ggtaatcagc tgtttttaaa
     4321 ctgtcgatca gcgcttcatt cttttgcccg accactttat ccgtagtata ctgagaccag
     4381 gcagacgaat acacaacgct gcaacaacaa agtagtaaaa tcagttccct tttcatgctt
     4441 tcatctcttt agtattcgat gtcccgatat acaatgatcc cttttggaat ttgttttttt
     4501 ggtcctttaa cagccggtga aaatttatgc ctggaaaaca gctttgttat gccatgattt
     4561 cacaggtttc ttgaatgaac gatcaaaatt aagccgtttt ttcaaaccga taagggcaac
     4621 aaaaacgcta atgcaagacg ctggtcttaa attaagggac cgggttcatc cgcattaaac
     4681 aattatttat tttcaaactt cgaatgcttc gattgccagc ttttgaagtt aatgcggcaa
     4741 gataaattga aacatccaac gcagtgtatt tgaaaaaggc ctaactgtaa acatcgaggc
     4801 cgtttaaccg ttaactggaa cggaaaagca gcgattgcag ggtattacga tttacttgcg
     4861 atagcaccgc cggccaatta gtttgttgta gcaaaaaaat tgaacgacct gcatctgaaa
     4921 ttatgcgcca ttgacatgaa gaagcttatg ttactttctc ttgtaccagt gctcatgcac
     4981 aaggcctttt cgcaggaaca aaaagacaca atcttcttca ctaatgggac catggtcatc
     5041 ggcgaagtaa ataagataaa gcttggcgtg atcagttttg atcctgacga tgcgaacgat
     5101 attactgtcc agttgcgaaa gctaaaaacg atcgcagcca cgagcaagtt gttcagaatt
     5161 gaaacggtag gtaaccatgt ctttcatgga aaattaattc cttatcggat caacaactat
     5221 gcgcagctcg tgagcgatgt tgacacgatc cttttatttc tccaggatat ttcggtgatg
     5281 tatccgtatg acaagaggtt catacaacgc ttttcaggaa acgtgggact tggttacagt
     5341 tacacgcgat ccagtgattt tggaagattg aattttgatg gcacagtgcg ctatgtttct
     5401 gatgagtcgg aactttcatt atcaacctcg ggaatttaca ctatgacaga ctcgtcggta
     5461 acaagagaca atgaaagttt tgcattaaaa gacaattact atttcagtcc cacgtggttt
     5521 ggcaccgcct ttcttgccta tcagcgaaat cttgaattag gcctggacag gcgtttccag
     5581 gaaggtctgg gtgccggcaa caaattcatc aggagcaaac atgtgtatgc atgggcgaga
     5641 acaggttttg tttttaacca ggaaaaaagc agtgaagaca ttcaaaccgg aacgcttact
     5701 gaaatttttg gccaacttca atttaatctg ttcaggttta cgaaacctga gatcaatttc
     5761 gacatgtcgc aaacattcta ctataatctt tcgcaaaatg gccgtttccg taacgatggg
     5821 gaaatgaatc tcaactggga gatcattgac gatctcaacc tgaacttagg attttataat
     5881 aattacgaca atcaaccccc tgtagagggt agccgtaaac tggattttgg cgttgtgttt
     5941 gggatcaact atagctttta agatgagtaa tgagtgatga gtgatgagtt caagcctata
     6001 ataaaacgcg ggacttgtta gttttttgaa tcgaagagaa tgaagtaatc aatgacaggt
     6061 tcacactgta aacactgacc aactcatcac tcattactca ttactgattc ttttaaatga
     6121 gtgatgaatg atcagggatg agttgagacg ctgaaatgca gagcctcgtt actttttttg
     6181 aatgtaagta ttcaaggaca ggctcgcatt gtaactcatc actcattact cattactgat
     6241 tctttgaaat gagtgacgaa tgatcagtga tgagttggga cgctgaaatg cagagcctcg
     6301 ttactttttt ttgaatgtaa gtattcaagg acaggctcgc attgtaactc atcactcatt
     6361 agctcattac tcattttttg aagtgaatga taaatgacag tgatgagttc accctgaaac
     6421 gcaggactca ttaaatgaat gatgaataat cagtgatgag ttcagaccct gaaatgcagg
     6481 actcgttact tttttgaatg taagtattca aggaggttcg cattgtaact catcactcat
     6541 tactcattac tgattttctg aaatgaatga tgaatgatca gtaatcagtt cagacgctga
     6601 tatgcaggac tcgttacttt ttcgaatgta agtattcaag gacaggttcg cattgtaaac
     6661 gctgacccac tcattactca tcactcatta ctgatcttcc tacttcacca acccctgcga
     6721 ctgcaattgc gccttcaacg tattgatgat gtcatccaat gtgcggtcga gcttggatgg
     6781 attcaaagat gaggtcgtac ctgaccaaag cagtttgcct tcagtaagag aataaaaatt
     6841 tgtttccacg taatacgtct tgtcttccgt gtaataccct gaactgccat aacg
//
LOCUS       DASQJI010000815         3649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2125360,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000815 DASQJI010000000
VERSION     DASQJI010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3649
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125360"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..1581
                     /locus_tag="VEV83_21390"
     CDS             163..1581
                     /locus_tag="VEV83_21390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HYK47752.1"
                     /translation="MSKQSTYTISGIFSFIRQAIQGIEMDYTRGSIRKAVFMLAIPMI
                     LEMFMESIFAIVDLFFVGHLPNSEHTVQTVGLTESVLTIVYSLAIGISMAATAVVSRR
                     IGEKNKDEAAHSAMQAIWVAIAITVAISIIGFAFAPNILHAMGAEPETIEMGTTYARI
                     DMGGSMVIMMLFLINGVFRGAGDASMAMKSLWLANICNIILCPLLIRGLGPIPAFGLT
                     GAAMATTTGRGIGVCYQLYHLFNGKALIKIRRKHFKLDWPIIRSVVSIASPGTLQFII
                     GSCSWIVLARLIAETGHSAASAGYQTAIRIVIFFILPAWGMSNAAATLVGQNLGANQP
                     ERAAASVMKTAKYNAVFMGVVSIIFLAAAEPIISVFSSQPDVKVIAVQALRIITTGYI
                     FYGVGMVMTSAFNGAGDTWTPTWINFACFWLFQIPLAYVLVDYFHMGPQGAFISIPIA
                     ETAITVAAYVLFRKGKWKTVAV"
     gene            1772..2209
                     /locus_tag="VEV83_21395"
     CDS             1772..2209
                     /locus_tag="VEV83_21395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47753.1"
                     /translation="MGIRFLKRINANTGLFNGHFVDAKAFYVLRFNAIPCVTFIGDMD
                     VTKAFTYIAETFDAVITASYQHSYFDHCEKNILFNSTIIVLKRKRMIELADTYCQVLY
                     AANDYAFVNKLVNDLAQFRIDKNMTPAFRHTHVVGFARHAEMN"
     gene            2523..2595
                     /locus_tag="VEV83_21400"
     tRNA            2523..2595
                     /locus_tag="VEV83_21400"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2556..2558,aa:Met,seq:cat)
     gene            2796..>3649
                     /locus_tag="VEV83_21405"
     CDS             2796..>3649
                     /locus_tag="VEV83_21405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYK47754.1"
                     /translation="MDNLYSQKTTNNINVFDNRFLSARNLYMHYFSLLPNVNYIGSVD
                     GEKAYKGFKEKYGSSIHHVHQYHWYKHQGKKYQFEKTMVVLKTNFLIEFDEGYCYILH
                     DGEQNELLEAVTALAKQCKERQRRKPLEINLIVKGRQEMELKAMEIKRTKLDIDLFYE
                     DEFKAVDETIRGRLNKKKDKGIVLLHGLPGTGKTTYLRYLIGKIKKRVLFLSPNVAGN
                     LMDPDFIEILIDNPNTVVVIEDAENIIMDRRNSADSSVSNLLNISDGLLADFLNVQLI
                     CTFNSSLT"
BASE COUNT         1096 a          719 c          858 g          976 t
ORIGIN      
        1 tctctcgctg cgaatgactt tacatatgcg gggcatatgg atctgtagct aaccacgact
       61 gttactaact gatttatagc cccgccttcc agcggggttt ttgtttgcag catctcccgc
      121 tcattcaatc accagttttg aaattttttt aaacaagtaa caatgtcgaa acaatcaaca
      181 tatacgataa gcgggatatt ttccttcatc aggcaggcta ttcaaggaat tgaaatggac
      241 tacacacgcg gcagcattcg caaagctgtc tttatgctgg caatacccat gatacttgaa
      301 atgttcatgg aaagcatttt cgcgatcgtg gatcttttct ttgtcgggca cttacctaac
      361 agtgagcaca ccgtgcaaac agttggcctg acagaatcgg tacttactat cgtttattcg
      421 cttgccattg ggatcagcat ggctgcgact gcagtcgtgt caagacgaat aggcgaaaaa
      481 aataaagatg aagcagcgca ttcagcgatg caggcgatct gggttgccat agcgatcaca
      541 gttgcgatca gtatcatagg gttcgcattt gctccaaaca ttttacatgc aatgggcgcc
      601 gaacctgaaa cgatcgaaat gggaacaacg tacgcccgga tcgatatggg tggaagtatg
      661 gtgatcatga tgctctttct tattaacggg gtttttcgtg gtgcaggtga tgcgtcgatg
      721 gcgatgaaaa gtttatggct ggcaaatatt tgcaatatca ttctttgtcc gctgctcata
      781 cgaggtctcg gcccgatacc tgcgttcggg ttaacaggtg cagcgatggc aacaacaaca
      841 ggtcgtggta ttggagtgtg ttatcaactg tatcatttgt tcaatggcaa agcgctgatc
      901 aagatccggc gtaaacattt taagctcgac tggccgatca tcaggtctgt cgtgagtatt
      961 gcatctccgg gcactttgca attcatcatt ggttcctgca gctggatcgt gctcgctaga
     1021 ttgattgcag aaaccgggca cagcgcagca tcggcaggat atcagacagc gatccgcatc
     1081 gtaatctttt ttattctgcc tgcatggggc atgagtaatg ccgcggcaac gctggttgga
     1141 caaaatcttg gagcaaatca gccagagcgt gcggcagcgt cggtgatgaa gactgcgaaa
     1201 tataacgcag tattcatggg agttgtgtcg atcattttcc tggcagcagc ggagccgatc
     1261 atatcggtgt tcagcagcca acccgatgta aaagttatag cggtgcaggc gttgcgtatt
     1321 ataaccaccg gctacatctt ttatggtgtc gggatggtga tgacaagtgc attcaacggt
     1381 gcaggagata cgtggacacc cacatggata aatttcgcgt gcttctggtt attccagatc
     1441 ccgcttgcat atgtgctcgt agattatttc catatggggc cacaaggagc cttcatatcc
     1501 atacctatcg cagaaacagc gatcactgtt gctgcatatg tattgttccg aaaaggaaag
     1561 tggaagacgg tcgcggtgta acgaatgcgc atagagagaa ggttgcgttg cgttgcgtcc
     1621 tcgtgtcgca gtgacttcga tgctcgtcat tgtaaacgaa gtgacgaatc tcggatcagg
     1681 catccaaaaa aaaattactc aaaaaagata cttatgtaca attaacgcga ctaattgagg
     1741 ctgataataa aatcagggaa aggaggtaaa catgggaatc agatttttaa agagaataaa
     1801 tgcaaatacc ggattgttca acggacactt cgtggatgca aaggcttttt atgtgttgag
     1861 attcaatgcg attccatgtg taacgtttat cggtgatatg gatgtaacaa aggctttcac
     1921 atacatcgct gaaacgtttg acgcagtaat tacagcgtca tatcagcact cttatttcga
     1981 tcactgcgaa aagaacattc ttttcaacag taccattatc gtattgaaga ggaagagaat
     2041 gatcgaactc gccgatacct actgccaggt tttgtatgcg gcaaatgact atgcgttcgt
     2101 gaacaagttg gtaaatgacc tggcgcagtt caggatcgat aagaacatga cacctgcctt
     2161 caggcacact catgtagttg ggtttgcaag gcatgctgag atgaattgat aagaccgggc
     2221 gatgggaagt ttcaaaactt tggaacttct aaattgcaga tcggcgaact ataagctcaa
     2281 agatctctca atgtatatcg ctcagtcttt ttataagtag aaaaagtttc aatttatgta
     2341 tgcaatcgaa ccaaacttgc gtctaataaa aaaattgaaa atgcgaaagg aaatcttttt
     2401 aggaatgaca acaaattata taagcagaac cgaccgcggt tatcagaaat tttcttgagc
     2461 tgatcattca gccctggaaa agcccggtcg attatttcaa ccgggttttt tatttaatac
     2521 aatgcgactt ggtgtaacca gtaacacgcc actctcataa ggtggaggat ttcagttcaa
     2581 gtctgaaagt cgcaacaaaa atcagtgcgg aagctgcgtg gacgcggacg ccatgagcgt
     2641 gaatgctgtt caaactgttg tttgttaaac aacaatcgct gtcgtgaaaa atataaaaag
     2701 caacacaaat gcgtgttctc gtggaaaaat gaaaagatta atggtggatg tagcaacgga
     2761 tggattatgc atttactatt tcaaacgaaa attttatgga caatctatat agccagaaaa
     2821 cgacgaataa tatcaacgtg ttcgataacc gttttctcag tgcaagaaac ttatatatgc
     2881 attatttcag tttgctgcca aatgtaaatt acataggcag cgttgacggc gagaaggcat
     2941 ataaaggttt caaagaaaaa tacggtagca gcatacatca tgtacatcaa tatcactggt
     3001 acaaacatca aggcaagaaa taccagtttg aaaagaccat ggttgtgctg aaaacaaatt
     3061 ttcttatcga gtttgatgag gggtattgtt atatacttca tgatggagag caaaatgagt
     3121 tgctggaagc tgtgaccgca ttggcgaaac aatgtaaaga aaggcagcgc agaaaacctt
     3181 tagaaataaa cctgatcgta aaaggccgcc aggaaatgga gttaaaggca atggaaataa
     3241 aacgtaccaa actggatatc gatctctttt atgaagatga atttaaagcc gtggacgaaa
     3301 caatacgagg caggttaaat aagaaaaaag acaaaggcat tgttctctta cacggcctgc
     3361 ctggcacggg taagacgaca tacctgcgct atctcatcgg taagatcaaa aagcgtgttt
     3421 tatttctgtc accaaatgtt gcaggtaacc tgatggatcc ggattttata gaaatactca
     3481 ttgacaatcc gaacacggtt gtcgttatag aagacgccga gaacataata atggacaggc
     3541 gtaacagcgc ggattcatct gtcagcaacc tgttgaatat ttcagacggg ttactagccg
     3601 atttcctgaa cgtgcagctt atatgcactt tcaacagttc tttgacttt
//
LOCUS       DASQJI010000816         2554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2125388,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000816 DASQJI010000000
VERSION     DASQJI010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125388"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(916..2019)
                     /locus_tag="VEV83_21410"
     CDS             complement(916..2019)
                     /locus_tag="VEV83_21410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-TA family PLP-dependent enzyme"
                     /protein_id="HYK47755.1"
                     /translation="MNWYEIKNIETIDSPALVIYKERILENIRKIKSMKDVAHLRPHV
                     KTNKIAEVCEMMLGEGITKFKCATIAEAEMLGMIDAPDVLLAYQPVGPKVTRLLQLVK
                     QYPSTHFSCVIDEFENAKHISEIFDAENLVLDVYIDLNTGMNRTGVKPSEKAIELFNR
                     CNKLRAINIIGLHVYDGHIRDTDVATRTQKADEAFQAIVELSAKIKSEAGKEVRIVAG
                     GSPTFPIHAQRTNIECSPGTFVFWDWGYKSLTPDEPFDFAALVISRVISVVDANTICT
                     DLGHKSISAENPLEKRVHFLNVPDAEPIGQSEEHLVLKVPDASKFRVGDVLYGVPIHI
                     CPTVALYEKAVVVENNEAIDEWRVIARDKKITV"
     gene            2216..>2554
                     /locus_tag="VEV83_21415"
     CDS             2216..>2554
                     /locus_tag="VEV83_21415"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HYK47756.1"
                     /translation="MDVQEPAISHSQQKISIAEYLEMENAALEKHEYYRGEVFAMSAA
                     KVPHNIITRNLWIGLGNKLKGKKCQPYGSDQRIHIPSNTLFTYPDISIVCGEIITLNE
                     DEFNVLNPSVI"
BASE COUNT          675 a          583 c          513 g          783 t
ORIGIN      
        1 aaacggattc acgcagatcg cgattccatt ccatcgcgtt catgctaaga tccaggtgtg
       61 cgtcgattgt gaacatgttc tgctttgagt attttagata ccagctgttg tttttttatg
      121 gcatcgcctg ttgcgtcgca agtgggatag cgttctttga gactatttaa aatagattta
      181 tccacgaaaa aatcacttca tcgttccctt tttttatggg gttgttataa cgtcaccaac
      241 agtgccgtcc aaccgaaaga gggaggccaa acaattgcta tctttcaccg attgtgctaa
      301 catatcgact ataattaatt gccagcaatt tttttatgat cttttttacc atcgtcctca
      361 tcaacccttc aatcctgggt gtttctttgt tgatttgcgt tctaccaaag gtcgtccctg
      421 ccgggactca ttacctccta atttattttc taccagatgg tcgtcccagc cgggacttac
      481 aatttcacct cgctagttct ttccggaaga tggatatgac aaatcgatca catcattgga
      541 tcagtcttga aaggaccatt atgaagcaaa aaaattgcag agacataaat cttaccaaaa
      601 ggtcgtccct gccgggactc attacctcct aatttacttt ctaccagatg gctgtccctg
      661 ccgggactta caaatttgcc ctcactagtt ctttatttgt ccagttccaa agggacgaca
      721 ttccggttac caatgatcgt ccctgccggc acttacaaat tcacatgtcg ctcgttgtcc
      781 agtcctaaag ggacgacatt atggtagtaa aatggatgca tgtgaaaacc aagtcccgta
      841 gggacgagca tatttgaaaa attttcgaat cgcctcacag ccctgaatct cctatgtccg
      901 tttacggccc ggttcctata cagttatctt cttatctctt gcaatcaccc tccattcatc
      961 aatggcttca ttattttcaa caacaaccgc tttctcatac aacgcaacag tcggacagat
     1021 atgtatcggt actccgtaca atacatcgcc cactctaaat tttgatgcat ccggaacttt
     1081 caataccaaa tgctcttcgc tctgaccgat gggctcggcg tccggcacat tcagaaaatg
     1141 tacacgtttc tccaatgggt tttctgcaga gatagatttg tggccaaggt ctgtgcagat
     1201 tgtgtttgca tcaacaacag agatcaccct ggatattacg agtgcagcaa aatcgaaagg
     1261 ctcgtcgggt gtgaggctct tgtatcccca atcccaaaaa acgaatgtgc ccgggctgca
     1321 ttcaatgttt gttctttgtg catgtattgg aaaagtggga gagcctcccg cgacaatgcg
     1381 cacttctttt cctgcttccg atttgatctt tgcagataat tcaacaatag cctggaacgc
     1441 ctcgtctgcc ttctgcgttc ttgtggcaac atcggtatcg cgaatgtggc cgtcgtacac
     1501 atgtaaaccg ataatgttta ttgcgcgtag tttattgcag cggttgaaaa gctcaatcgc
     1561 tttttctgat ggtttaacgc cagtacgatt catgcctgta ttcaaatcaa tatacacatc
     1621 aagcaccagg ttttccgcgt caaagatttc agaaatgtgt tttgcgtttt caaattcatc
     1681 tatcacacat gaaaaatgtg ttgaaggata ttgcttaacc aactgcaaca aacgagtcac
     1741 tttcggtcca acgggctggt acgcgagcaa tacatcaggc gcgtcgatca tacccagcat
     1801 ttccgcttct gcgatggttg cgcatttgaa ttttgtgatg ccttcgccga gcatcatctc
     1861 acaaacttca gcgatcttat tcgtttttac atgaggacgc aggtgagcaa catctttcat
     1921 gctttttatt tttcgaatgt tttcgaggat cctctctttg tagatcacga gtgcgggtga
     1981 atctatggtt tcgatgtttt ttatttcata ccagttcatg cgatttgtga tttacgattt
     2041 acgatttacg atttacgatt gcagattgca gattgcagat tgcagattgc agattgcaga
     2101 ttgcagattg cagattgcag attgcagacg caatcaaccc ggaaagttat taagtaaatt
     2161 ttggttttag caaatccacc tgcaagtcgt cgccattaat ttgtattttt attgtatgga
     2221 tgtacaggaa cccgcaatct ctcacagtca acaaaaaata tcgattgcag agtatcttga
     2281 aatggagaat gccgctctcg aaaaacatga gtattatagg ggagaagtgt ttgccatgtc
     2341 tgcagcaaag gtgccgcaca atattattac caggaattta tggattggac ttggaaacaa
     2401 actgaagggc aaaaaatgcc aaccttatgg aagcgaccag cgtattcata tcccgtccaa
     2461 cacattattt acttatcccg atatttcgat tgtttgcggc gaaataataa cgctcaatga
     2521 agatgagttc aacgtcttaa acccatccgt aatt
//
LOCUS       DASQJI010000817         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3046160,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000817 DASQJI010000000
VERSION     DASQJI010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3046160"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1523
                     /locus_tag="VEV83_21420"
     CDS             <1..>1523
                     /locus_tag="VEV83_21420"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47757.1"
                     /translation="EKQLLVSKEDRKKNFEKAQRDYAEVNFSLGQTYYEQGKYKDAIN
                     AYQIAADLRPADSRTLSALANALEVTGNSARAEELLKKALAIDEKEMGATNPDLVNRV
                     WELGAYYANHNNFEQCELHFKRVITILEKNFGTDYPAIAFHLNNLAMLYMTKARNVDA
                     ELLIKRALAIQEKAYGPESPKIAYTLNTLGAFYSSQGKTADAEEVLKRSLNIISKFVQ
                     TSTDKEAKASELAVNYVTAAGYLAEIYRDQGKYAEAEKYLTTRAELEEKSLGPMHPRL
                     VSSLNALAYIYEQQKKYPDAQRIYERCLAIMENALGSESPQLASAIYNLVELHEEQKN
                     YALAEAGFKRVISIYEKAGSKASAVARGLINLADFYRRQEKYDEAESQYNRSLALMEN
                     SGEPAYPIVPAILTKLALSFSRQKKFDEAEKMFVRALDTIDKAQNPTFNDVVAAVSNL
                     SRFYWNQKKYSQAELLMRRLVSALESHKESGNRNVAVATLQLASVTREQNKYAEAKTL
                     "
BASE COUNT          478 a          348 c          361 g          336 t
ORIGIN      
        1 gaaaagcaat tgctcgtgtc gaaagaggat aggaagaaaa attttgaaaa agctcaaaga
       61 gactacgcgg aggtcaactt ctctctcggt cagacctact atgaacaagg aaaatacaaa
      121 gacgctatca acgcctatca aatagcagcg gacttgcggc ccgccgacag caggactttg
      181 tcggcgcttg ccaatgcgtt ggaagtcacc gggaactctg ccagagcgga ggaactactc
      241 aaaaaagcac tcgcgatcga tgaaaaagag atgggggcaa ccaatcctga tcttgtgaac
      301 cgcgtttggg agttgggagc ctattatgca aatcataaca acttcgagca atgtgaatta
      361 catttcaaac gcgtaattac tatcctcgag aaaaacttcg gaacagacta tcccgccatc
      421 gcatttcacc tgaataattt agcgatgctc tatatgacga aggccaggaa tgtcgatgcg
      481 gagcttctta taaaaagggc tctggctatt caagaaaagg cttatggccc tgaaagtccc
      541 aaaatagctt ataccctcaa caccttgggc gccttttatt cgtctcaagg aaagactgcg
      601 gacgcagaag aagttctcaa gagatccctg aatataattt cgaagtttgt ccaaaccagc
      661 actgataaag aagccaaggc ttcagaatta gcggtcaatt acgtcaccgc ggcaggttac
      721 ctcgctgaaa tctatagaga ccaaggcaag tatgcggaag cagaaaagta tctaacgacc
      781 cgagctgagt tggaagaaaa atcgttaggc ccaatgcacc cacgactggt tagtagtctg
      841 aacgccctgg cttatattta cgagcagcag aaaaagtatc cagatgccca gcgaatatac
      901 gagcgttgtt tggccattat ggagaacgca ctaggcagcg aatcacccca actcgcttcg
      961 gctatctaca acttagttga actccatgag gaacagaaaa actatgcatt agctgaagca
     1021 gggttcaagc gggtcatcag tatttatgag aaggcgggtt caaaagcatc ggcggtagct
     1081 cggggtctga tcaacttggc cgatttttat cgcagacagg aaaaatacga tgaggccgag
     1141 tctcaataca accgaagtct cgctttgatg gaaaattctg gagagcctgc gtatccgatc
     1201 gtgcctgcta tccttacaaa attggccctc tccttttccc gacaaaagaa attcgacgaa
     1261 gcggaaaaaa tgttcgtaag agccttggac actattgata aggcacaaaa tccaacgttt
     1321 aacgacgtgg tggcggcagt cagtaattta tccaggtttt attggaatca gaaaaaatat
     1381 tcgcaagccg aacttcttat gaggcgcttg gtaagtgcct tggaaagtca caaagaatcc
     1441 ggcaaccgaa atgtggctgt tgccacacta cagctagcat cagtcactcg cgagcagaac
     1501 aagtacgccg aagccaagac act
//
LOCUS       DASQJI010000818         3053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_589204,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000818 DASQJI010000000
VERSION     DASQJI010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589204"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VEV83_21425"
     CDS             <1..736
                     /locus_tag="VEV83_21425"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47758.1"
                     /translation="LQVMVFGNFDVVQQNATITFPSSGKWYNYLTTGTLNLASTSYNV
                     TLQPGEYYVYTNKDVKGLVLPVSWLSFSAQKSGAHSVLLNWSTENEVNIDHYEIERSS
                     SGTSFKTIGTTPASKNIGGVYKYSFTDQLPLNGINYYRIKQVDKDGHFQYSSVERIDL
                     NDIIKRWNIYPNPAKDNTGLYALDNFLKAQISVADLNGKTIYRTTLSNVGAGQKIQVP
                     LNVNKGVYVLKIVSDKGSDTEKIIVQ"
     gene            complement(940..1596)
                     /locus_tag="VEV83_21430"
     CDS             complement(940..1596)
                     /locus_tag="VEV83_21430"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HYK47759.1"
                     /translation="MPKFEDTYQHKGLRKKLVDQLRAKGITSERVLEAIYSVPRHFFL
                     DSAFDKIAYEDRAFPIGEGQTISQPYTVAYQTQLLNLHRNEKILEIGTGSAYQASILA
                     EMGAWVFTIERQKKLFEQNKNFVFKSKYPSIKFFYGDGFEGLPTYAPFDKILITAAAP
                     FIPPRLLEQLKTGGQMVLPKDEGELQRMLRITKKSDGSYEEELFDYFSFVPMLRGKNG
                     "
     gene            complement(1710..2246)
                     /locus_tag="VEV83_21435"
     CDS             complement(1710..2246)
                     /locus_tag="VEV83_21435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HYK47760.1"
                     /translation="MSALLRNIIRFVLFILVQVYIFNKVPPVHQFVKPYIYFLFILWL
                     PFNMGRAAQMLVAFIFGLTFDYFSGTPGLHAAPCVLIAYLRPFLLNLLIPQETTQLSF
                     AEPSVKSMGWGSYATYVLLLTFMHTALLVFIEWMEFGDFLYFIGKVTATTLLSLILIF
                     ITEMIFPRKGKYRTNAPI"
     gene            complement(2249..>3053)
                     /gene="mreC"
                     /locus_tag="VEV83_21440"
     CDS             complement(2249..>3053)
                     /gene="mreC"
                     /locus_tag="VEV83_21440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HYK47761.1"
                     /translation="FLFLVLLGASLIILINYNQTYQAVFSNIANETTGKVGSQYNKVE
                     YYFKLKRTNEALAAENAQLRDLLKQSFDSPDTSNVIKIDSLLKDTLGRVRRFSFLPAK
                     VVNNDVSDQNNYITLYRGSKQGVRTDMGVIGPEGVVGKVISVSDNYCLVMSLLNRNSK
                     VSAMMKKGFYTGLADWDGKDPRYIELHNIPKSAKIAVGDTVLTSSYSGSYPPGIIVGR
                     VAAVEADPASGFYELKIKTATDFFSLQYAYLVDNMMMVEQKELEAKKPK"
BASE COUNT          864 a          645 c          676 g          868 t
ORIGIN      
        1 tttacaggtg atggtgtttg ggaattttga tgttgttcag caaaacgcaa cgatcacttt
       61 tccttcaagc ggtaaatggt acaactattt aacgacgggc acattgaatc tcgcttcaac
      121 atcgtacaac gttacgctcc aacccggtga atattatgtg tacacaaata aagatgtgaa
      181 agggctcgtg ttaccggtga gttggctaag ctttagtgcg cagaaatcgg gagcgcattc
      241 tgttttgttg aattggtcaa ctgaaaacga ggtgaacatc gatcattacg agatcgaacg
      301 cagcagtagc ggtacttcat tcaaaactat tggcacaacg ccggcatcaa aaaatattgg
      361 cggcgtttac aaatactcat ttacagatca gcttccgctg aatggtataa attattaccg
      421 cattaaacaa gttgataaag acggacactt ccagtactcg agcgttgagc gtatagattt
      481 gaatgatatc atcaaacgtt ggaacattta tccgaatccg gcgaaagaca ataccggttt
      541 gtatgcactg gataattttt tgaaggcaca gatctctgtg gctgatctga acggaaaaac
      601 tatttatagg acaacactca gcaatgtcgg cgcaggtcag aagatacaag taccgctcaa
      661 cgtgaacaaa ggcgtttatg tgttgaagat agttagtgat aaagggagtg ataccgagaa
      721 gataattgtg cagtaggttt cacgcggagg cgggtagatc agcaaagacg caaagtgccc
      781 gtacaaactt tgccgctgta tgtgaaggct cattcagtat ttatggcttg ataaatgatc
      841 agaaaggaat cgatacgcgg aaatttaatt ctgcaacagc ttatttaagg gcgtggttta
      901 ctctgaattc tttgcaaact ttgttgcttt gcgtgacgat tatccattct ttccgcgcaa
      961 catgggcacg aaagaaaaat aatcgaaaag ttcttcctcg taactaccat cgcttttctt
     1021 ggtgatgcgt agcatgcgct ggagttcgcc ttcgtctttt ggtagaacca tttgtccgcc
     1081 tgtttttaac tgctctaaca acctcggcgg tataaagggc gcagctgcag taattaaaat
     1141 tttatcgaac ggtgcgtacg taggaaggcc ttcgaatccg tcgccgtaaa aaaattttat
     1201 actcgggtat ttcgacttaa agacgaaatt cttgttttgt tcaaaaagtt ttttttgccg
     1261 ctcgatcgta aagacccatg cacccatttc cgcgagtatg ctcgcctggt aagcgctgcc
     1321 agttccgatc tccaaaattt tttcattgcg atgcagattt aataactgag tttgataagc
     1381 gactgtgtaa ggttgtgaga tggtttggcc ttcgccgatc gggaatgccc ggtcttcata
     1441 tgcgatctta tcaaatgcag agtccagaaa aaaatggcgc ggcacgctgt agattgcctc
     1501 gagcacgcgc tctgaagtga tgcctttcgc cctcaactgg tcaaccaact tttttctcaa
     1561 tcctttgtgc tgatatgtgt cctcgaattt tggcattcgt gcaaagctat ggattgcgaa
     1621 tggtgaagtt gtgaattgtg aatggtcagt tgtgaatagt cgatagtcaa atcctaaatc
     1681 ctgatttcta aatcctaaat cacaaacgct caaatcggcg cattcgttct gtattttccc
     1741 ttgcgcggaa aaatcatttc ggtaatgaaa atcagtataa gacttagtaa tgtggtcgct
     1801 gttacttttc caataaaata taaaaagtcg ccgaactcca tccattcaat aaatacaagc
     1861 aaggctgtat gcatgaatgt aagaagaagc acataggtgg cgtaggaacc ccatcccatg
     1921 cttttcacag acggttctgc aaagctgagc tgtgttgttt cctgcggaat aagcaggttt
     1981 aacaggaatg gacggaggta ggcaatgagc acacatgggg cggcatgcaa acccggtgtg
     2041 ccgctaaagt agtcgaatgt caatccgaag atgaaagcga caagcatttg cgcggcgcgg
     2101 cccatgttga aaggcagcca taaaataaaa aggaaataaa tgtatggctt cacaaactgg
     2161 tgcaccggtg gcactttatt gaatatgtaa acctgcacca aaatgaagag cacaaaccgg
     2221 atgatatttc ttaacagagc gctcattgtt attttggctt tttggcctcc agttcttttt
     2281 gttctaccat catcatgtta tcaaccaggt aagcatactg caggctgaaa aaatcggttg
     2341 ctgtttttat tttcaattca taaaaaccac ttgcgggatc ggcttcgacg gcagcgaccc
     2401 ttcccactat aattcccggt ggatagctgc cggaataact acttgtaagc acggtatcgc
     2461 caaccgctat tttagccgat ttaggaatat tgtgcagctc gatataacgt ggatcctttc
     2521 catcccaatc ggcaagccct gtataaaatc ctttcttcat catcgcgcta actttgctgt
     2581 ttcgattcaa caaactcatc acgaggcaat aattgtcgct aacagaaatt actttaccga
     2641 caacaccctc agggcctatc acacccatgt cagtgcgaac gccttgttta cttccacgat
     2701 aaagtgtgat gtaattgttt tgatctgaca catcattgtt aaccactttt gccggcagga
     2761 agctaaatct tcgaacacga ccaagcgtat ccttcaacaa cgaatcaatt tttattacgt
     2821 tcgaagtgtc agggctgtca aaactttgct ttaaaagatc ccgcagctgc gcattctctg
     2881 ctgccagcgc ctcgttggtt ctttttagct tgaaatagta ttctactttg ttgtattgtg
     2941 atccgacctt accggtggtc tcattggcaa tgtttgaaaa cactgcctgg taagtttgat
     3001 tgtaattaat aaggatgatc agggacgctc ccagcaaaac gaggaacaga aag
//
LOCUS       DASQJI010000819         3630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1204498,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000819 DASQJI010000000
VERSION     DASQJI010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204498"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VEV83_21445"
     CDS             <1..399
                     /locus_tag="VEV83_21445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014219765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYK47762.1"
                     /translation="IGYIVSLAMVAWCFYTHASAVVLTSFLALFIAAHAIGQGAVIWV
                     FISEIFPNKVRAMGQSFGASTHWVFAALITLITPVFLDKDKGILRDHPGHIFLFFAFM
                     MVLQLIWVLTKVPETKGRALEQIQRDLGID"
     gene            complement(449..1258)
                     /locus_tag="VEV83_21450"
     CDS             complement(449..1258)
                     /locus_tag="VEV83_21450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HYK47763.1"
                     /translation="MPQKKAAKKPVKDAGKKTIPAKKAIAHKAKKSAPAKKSATKAAA
                     KPAKKVAAKPAKKVVPAKAAKKAPVPAHKPVSTHQKHTQPMAKHTKETQKPVNSNKQV
                     KKEEPVKEVKLPKISAKSRVPYQPAYKPLEQRQETVRPSEPLVRYNDSDLNEFRELIQ
                     KKLDSAKKELGYLQGLITRKDDMGGDESENRYMTMEDGSISMEREQLSQMASRQITYI
                     DHLEKALIRIENKTYGICRVTGRLIDKARLRAVPHATLSLEAKLGLVKAGE"
     gene            complement(1264..>3630)
                     /gene="ileS"
                     /locus_tag="VEV83_21455"
     CDS             complement(1264..>3630)
                     /gene="ileS"
                     /locus_tag="VEV83_21455"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HYK47764.1"
                     /translation="LEGISYEQLLPFEANKTDNPNAFNVLLGDFVTTEDGTGIVHTAP
                     AFGADDFKIGKKYNIGILTMVDRQGKFVDGLGEFSNRYVKNYKDDPNYEDVNVDICVK
                     LKKENRAFKVEKYEHSYPHCWRTDKPILYYPLDAWFIKTTALKERLVQLNKTINWKPK
                     STGEGRFGNWLENMVDWNLSRSRFWGTPLPVWRTKDGKEEICIGSIAELTAEAQKADD
                     ILNTMNARFIADGLDLHKPMVDEIVLVSPSGEPMKRVPDLIDVWFDSGAMPYAQWHFP
                     FENKDEFEKTFPADFIAEGVDQTRGWFYTLHAIAGLLFDSVAFKTCVSNGLVLDKNGN
                     KMSKRIGNVIDPFTTIQSFGADATRWYLVTNASPWENMKFDLDGIREVQRKFFGTLYN
                     TYQFFALYANVDGFSFKEPSLPLDERPEIDRWILSSLNTLIRKVTEAMDDYEPTIAGR
                     LIDEFADEHLSNWYVRLSRRRFWKGEYEHDKISAYQTLYECLETIVRLMAPISPFFSD
                     AIFQNLNAATGRFPVASVHHTDFPTANESAIDCALEERMQLAQDASSLILSLRKKINI
                     KVRQPLRRVLVPVLSAEMKSQFQKIEHLLKAEVNVKDIEYITDTESIIHKKVKPNFKL
                     LGAKLGAQMKEASVAIAKLSQPQIAELERAGSITLELSSGSIQISAGEVEVIAEDIPG
                     WSVASKANLTIALDTTVTNELKMEGHAREFVNRIQSIRKDRGFELTDRIFVDILDNTE
                     LKPSINTFKNYICAEILADSLNWVPQMQDGTEIEVNDILLKVSLNKKV"
BASE COUNT          821 a          879 c          821 g         1109 t
ORIGIN      
        1 atcggctaca ttgtgagcct cgctatggtg gcgtggtgct tttacacaca cgcaagcgcg
       61 gtggtgctta ccagcttcct tgcacttttt attgcggcgc atgcgattgg gcagggcgca
      121 gtaatttggg tttttatatc agagatattt ccgaacaaag tgcgggcaat gggtcaatca
      181 tttggcgcaa gtacacactg ggtgtttgcg gcgttgatca cgctcattac gccggtgttc
      241 ttagataaag acaagggcat tctgagggac catccgggcc atatcttttt attttttgcg
      301 ttcatgatgg tgttgcagct tatttgggtg ctcacaaaag taccggaaac aaaaggcaga
      361 gccctggagc aaatacaaag agatctgggc atagattaaa atagaaaagc catcgtcttg
      421 atggctttcc aaaaaaaatt cattgatgtt actctcccgc tttcacgagc ccaagttttg
      481 cctcgaggct taaagtggca tgaggcactg cacgtaacct cgccttatcg atcaaccggc
      541 cagtcacccg acaaatgcca taggtcttat tttcgatgcg gatcaacgcc ttttcaagat
      601 gatcaatgta cgttatttgc cggcttgcca tttgacttaa ctgttcacgc tccatgctga
      661 tgctgccatc ttccatagtc atataccgat tttcgctctc gtctccaccc atgtcatctt
      721 tacgggtgat taacccctgc aggtatccaa gctctttctt ggctgaatcc agctttttct
      781 gaataagctc tctgaattca ttcaagtcgg aatcattgta gcgtacgagg ggttcacttg
      841 gcctcacggt ttcctgccgc tgctcgagcg gcttataggc aggctgatag ggaactctgg
      901 attttgcgga gatcttggga agcttaactt cctttactgg ctcctctttc ttcacttgct
      961 tgttcgaatt aacgggcttt tgagtttctt ttgtgtgttt tgccataggt tgcgtatgtt
     1021 tttgatgcgt acttacgggt ttatgagccg gcacgggtgc ttttttagct gccttcgcag
     1081 gaacgacctt tttggcaggc ttagcggcta cttttttcgc cggtttagcc gccgctttag
     1141 tggcagattt ctttgccggg gcgctttttt tcgccttatg ggcaattgcc ttttttgcgg
     1201 ggatcgtttt cttgcccgcg tccttcactg gtttttttgc agcttttttc tgtggcatcg
     1261 tcgttatact tttttgttta gactcacttt caacagaatg tcattcactt cgatctctgt
     1321 accgtcttgc atttgaggca cccagttaag actatctgcc aaaatttcgg cgcaaatata
     1381 gtttttaaat gtatttatag agggctttag ctcggtattg tcaagtatat ccacgaaaat
     1441 tcggtcggtt agctcaaaac ccctgtcttt tcttatactt tggatgcgat ttacaaattc
     1501 cctcgcgtgg ccttccattt tcaattcatt ggtaactgtc gtatcgagtg cgatcgtgag
     1561 atttgctttc gaagcgacac tccagccggg aatgtcttcc gcaataacct caacttcacc
     1621 agccgaaatt tgaatgctgc ccgatgaaag ttccagggtg atcgatccag ctctttcaag
     1681 ctcagcgatc tgcggctgtg aaagttttgc gatcgcaact gatgcttcct tcatctgcgc
     1741 acccaatttc gcgcccagca gtttgaagtt gggtttcacc tttttatgta tgatgctctc
     1801 ggtgtccgtt atatattcaa tgtcttttac atttacctca gccttcaaca ggtgttcaat
     1861 cttttgaaac tgcgatttca tctccgcact taacaccgga accagcaccc tccggagcgg
     1921 ctgacgtacc ttgatattta tttttttacg gagcgacaag atcaatgacg aggcgtcctg
     1981 cgccaattgc attctttctt cgagcgcaca atcgatagct gattcattag cggtgggaaa
     2041 atccgtgtgg tgcacggacg caaccgggaa gcgcccggtg gcagcattga ggttttgaaa
     2101 aatcgcatcg ctaaaaaatg gtgagatggg agccatcaaa cgaacgatgg tttcgaggca
     2161 ttcgtacaat gtttggtaag ccgatatctt atcgtgttcg tactcgcctt tccaaaaccg
     2221 tctgcgtgat aatcttacat accaattgct caggtgctca tctgcgaatt catcgatgag
     2281 ccggccggcg atggtaggct cgtaatcgtc catcgcctcg gtcactttgc gaataagtgt
     2341 gttgagggat gaaagtatcc agcggtcaat ctcggggcgt tcatctaatg gcagggatgg
     2401 ttccttaaaa ctgaaaccat caacattcgc atacaaagca aaaaactggt acgtgttata
     2461 taatgttcca aaaaatttcc gctgcacttc cctgatgcca tcaagatcaa atttcatgtt
     2521 ctcccacggt gaggcattcg tgacaaggta ccagcgggtg gcatctgcgc caaagctttg
     2581 gatggtggtg aacggatcga taacattgcc aatgcgcttg ctcatcttgt tgccgttctt
     2641 gtcgagtaca agcccattcg aaacgcaggt tttgaaggcc acgctatcga acaaaagccc
     2701 ggcgatcgca tgcagtgtat aaaaccatcc gcgcgtttga tcaacgcctt cagcaataaa
     2761 atcggccgga aaagtttttt caaactcgtc cttgttttca aaaggaaagt gccattgtgc
     2821 atagggcatt gcaccgctgt caaaccaaac atcgatcagg tctggtacac gcttcatcgg
     2881 ttcgccggaa ggtgaaacca gcacgatctc gtccaccatt ggtttgtgca ggtccagccc
     2941 gtcggctatg aaccttgcat tcatcgtgtt caatatgtcg tcagcctttt gcgcttccgc
     3001 tgtcaattct gcgatagatc caatgcatat ttcttcctta ccatctttcg ttctccacac
     3061 cgggagcggc gtgccccaaa agcggctgcg gcttaggttc caatcaacca tattttccaa
     3121 ccagttcccg aatcttccct cgccggttga tttaggcttc caattgatgg tcttgttcag
     3181 ttgaacgagc ctttccttta atgcagtggt ttttatgaac cacgcatcaa gcgggtaata
     3241 caaaatgggc ttgtcggttc gccagcaatg cggatagcta tgctcatatt tttcaacttt
     3301 aaaagcgcga ttttcttttt ttagcttaac gcagatgtcg acgttcacat cttcgtagtt
     3361 cggatcatct ttataatttt ttacataccg gttactgaat tctccaagtc catccacaaa
     3421 ctttccctgc ctgtcgacca tggttaaaat gccgatattg tacttcttgc caattttaaa
     3481 atcatccgca ccgaatgccg gcgcggtatg aacgatgccc gttccgtctt cggtggttac
     3541 aaaatcaccg agaagaacgt tgaatgcatt cgggttgtct gttttgttgg cttcaaacgg
     3601 aagcaattgc tcatacgaaa ttccttccag
//
LOCUS       DASQJI010000820         3314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_286005,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000820 DASQJI010000000
VERSION     DASQJI010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286005"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VEV83_21460"
     CDS             <1..493
                     /locus_tag="VEV83_21460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47765.1"
                     /translation="EVLQDPNLHLNAEDWSEQQQFLARVEKNISEIHNAINDMRKVKK
                     QIGSYNDLLKNSTENKDLVDAGKQLIDKIDKWEAELVETRQKNFQDVINWPSKLSSGF
                     MNLKILADSHDPRITQGLKDVLSDLEKEWVKYKQVRTDELVKEVDAYNAKFKSKNLPA
                     VMM"
     gene            712..1302
                     /locus_tag="VEV83_21465"
     CDS             712..1302
                     /locus_tag="VEV83_21465"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYK47766.1"
                     /translation="MELDNIPGAYERFRKKMMSYAPITDGDFRHMAEMMHEKHCSKGE
                     VLLKEGQVCTKYYFVYKGCIRSFGLEDGREINVKFYFEDDTACDFASFRNELPSEFYL
                     VAMEDCIVFYATKAEAVPVLQAGSSFQMFLFRFFQQLFLTEEEHSNSFKLLSPEERYN
                     FLVESKPEYLQRIPLLHLAPYLGMSRETLTRIRKKF"
     gene            1712..2092
                     /locus_tag="VEV83_21470"
     CDS             1712..2092
                     /locus_tag="VEV83_21470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47767.1"
                     /translation="MVEIPLVKAKLVVVAEHGTLVRVKVLISNSLVHLELLENKEGNL
                     FLASSIQPEGIVYYGTTPALFCKFWEGQMTLQALFNETPSHFVEIVTETKTALYNRND
                     IEIVLVCGEKTFGDLADPDSIEVW"
     gene            complement(2322..>3314)
                     /locus_tag="VEV83_21475"
     CDS             complement(2322..>3314)
                     /locus_tag="VEV83_21475"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK47768.1"
                     /translation="FSRLLATAPLRWIEYFSTRNKLKDIVIEKPPIFILGYYRSGTTY
                     LQRMFMEDSRLGYMSLFQTVFPDLILCFEKRMTPLLESLSKLLRAENPFHNIPLSWYS
                     AGEEDVGMTNLISSYSIQWGYLFPQKMNAHLNKYVLLDGLSEPEKQAWLKTYLYLIRK
                     ISCANHQKQLVLKNPPNMARIRYILSMFPDAKFVYIQRDPFDTYASNKRMVQMIFKKY
                     ALGKSVDVDPAPLILDSYVLMLEHYHRDKLLIPPANLCEISYEKFVAHPVECMETIYE
                     QLRLGDFSLCRQAMCMLAKREKDHPVTEHTLEPHERAIIEERINQMSSVHPNVK"
BASE COUNT          957 a          671 c          725 g          961 t
ORIGIN      
        1 agaagtttta caagacccga atctgcattt gaacgctgaa gactggagtg agcaacaaca
       61 atttttagcg cgcgtggaaa aaaatataag cgagatccac aacgcaataa acgacatgcg
      121 taaagtaaaa aaacaaatag ggagctacaa tgatttgctg aagaactcta ctgagaacaa
      181 agaccttgtt gatgccggca aacagcttat cgataaaata gacaaatggg aagctgagct
      241 tgtcgaaaca agacaaaaga atttccagga cgtgatcaac tggccatcga aattgagttc
      301 cggttttatg aatttgaaaa ttttggctga cagtcatgat ccaagaataa cgcaggggct
      361 caaagatgtt ttatcagatc tcgaaaaaga atgggtgaaa tacaaacagg tgagaactga
      421 tgaactggta aaagaagtgg atgcatacaa tgcaaaattc aagagcaaaa atcttccggc
      481 ggtgatgatg tgaggcagtt acggcgttgt gttgacggga agatgttggt gcgcaagaaa
      541 ccttgaattt cttccgcgtt gcggaaaaag attgtgtccc atttatcatt ttgttccgtc
      601 ctttttgcgc atcagtttgc ttttttcata aattggaaga tgcattcaaa aaccagcaat
      661 ttgaacttcg gtgaagtgat ttaattttgg ctttcgtttg aatttcccgt tatggaatta
      721 gacaacatac ccggcgcata tgagcggttc aggaaaaaaa tgatgtccta tgcgcctata
      781 acagatggcg attttcgcca tatggctgaa atgatgcatg aaaaacattg cagcaaaggc
      841 gaagtgttgc tgaaagaggg gcaggtctgc actaaatatt atttcgtcta taaaggctgc
      901 atccggagct tcggcctgga ggatgggcgc gagatcaatg taaaatttta ttttgaagat
      961 gacacggcct gcgactttgc aagttttcgc aatgaactgc cttccgagtt ttacctggtt
     1021 gcgatggaag attgcattgt cttttacgct accaaagccg aagctgttcc ggtactccag
     1081 gcaggatcat cgttccagat gttcttattt cgttttttcc agcagctatt tttgacagaa
     1141 gaagaacatt ccaatagttt taaactcttg tctcctgaag aacgttacaa cttccttgtt
     1201 gaaagtaaac ctgaatacct gcaacggatc ccgttgctgc acctcgcacc gtacctcggc
     1261 atgagccgcg aaacgctaac gaggatacgg aagaaatttt agatggtgaa ttgtgagtgg
     1321 tgaattgtga atagtgaatg cactaatctc aagtgtggac gatgaatctt aaatcctaaa
     1381 tcctaaatcc taattcctaa atcggaaatc tgcaatcgcc aatctgcaat agcgaatctg
     1441 caatccgtta aatcacccgc cttatcactt ttgcgtcatt tgacgcacaa cgcccgcatg
     1501 ttacgcggct aattttgttc cgttgtttga gcgaagaaag aagggtattg aaaaaccgag
     1561 tattttccat tactcttaat gggcgaagtt tctacttcgc ctatttcatt tttcgatagc
     1621 ctggctggca tcatcagctt ctatcccttt cctggtcata tttttttact gctgcgcttc
     1681 cgtttgagtc atttgacgca acaaattttt tatggtggaa atacctttgg tgaaagcaaa
     1741 gctcgtggtg gttgcagaac acggcaccct tgtgcgtgtg aaagtattga tcagcaattc
     1801 gcttgttcac ctggaattac tggagaacaa ggaaggtaat ctatttcttg cttcatcgat
     1861 acaaccggaa ggaattgtat actacggaac gacgcctgca ttgttctgca aattttggga
     1921 aggccaaatg actttgcaag cgctgttcaa tgaaactccg tcgcattttg tggagatcgt
     1981 taccgaaacg aagacagcgt tgtacaatcg caatgatatc gaaatagtac tggtgtgtgg
     2041 ggaaaaaacg ttcggcgacc tggcggaccc ggactcaatc gaggtttggt aacgtgttga
     2101 ttggctcacg cgcgacaatt taaaaacatt aaaaaacgaa ctggttggaa tcttttgtaa
     2161 cggaaatatc tgaacattac ctggtcctcg tgtgcacatt agggtacttc atcacgatat
     2221 tttcagtgct taaagctttt cagtacaata aagacaaatt cgaagagtga gcttttcttg
     2281 accaaaacat tttcagccct taacccttct ttacattttc gttatttcac atttggatgc
     2341 actgacgaca tttgatttat gcgttcttct ataattgcgc gctcgtgtgg ctccagagtg
     2401 tgttcggtta ctggatgatc tttttcccgt ttcgctaaca tgcacatggc ttgcctgcaa
     2461 agcgaaaaat cacccaaccg gagttgttca taaatagtct ccatgcattc aaccggatgg
     2521 gcaacaaact tttcatagct gatctcacaa agattcgccg gcggaataag cagtttgtcg
     2581 cggtgataat gttccaacat taatacatag ctatctaaaa tcagaggagc cggatcaaca
     2641 tcaacgcttt ttccaagagc atatttttta aagatcatct gtaccattct tttattcgag
     2701 gcgtacgtgt caaatggatc ccgttgtata taaacaaatt tcgcatccgg aaacatggac
     2761 aggatatacc tgatcctcgc catattcggc ggatttttta gcacaagctg tttctgatga
     2821 tttgcgcagg aaatttttct gatcaaatac aaatatgttt tcagccatgc ctgtttttcc
     2881 ggctcactta atccatccaa taaaacatat ttgttcaaat gagcattcat cttttgcgga
     2941 aacagatagc cccactgtat actgtaagag cttatcaagt ttgtcatccc tacgtcttct
     3001 tcgcccgccg aataccacga tagcggaata ttgtgaaagg gattttccgc tcttagtaat
     3061 ttgcttagcg attctaataa cggcgtcatc cgcttttcga aacatagtat aaggtcgggg
     3121 aaaacagttt gaaagagcga catgtatcca agccggctgt cctccatgaa catccgttgt
     3181 aaataggtag ttccgctgcg gtaataacca agtatgaata tgggcggctt ttcaataacg
     3241 atgtctttta gtttgttgcg tgtggaaaaa tattcgatcc atcgtaaggg cgcagtggcc
     3301 agcaacctgg agaa
//
LOCUS       DASQJI010000821         8840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1666524,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000821 DASQJI010000000
VERSION     DASQJI010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8840
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666524"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VEV83_21480"
     CDS             <1..185
                     /locus_tag="VEV83_21480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47769.1"
                     /translation="RRGQGTYFSMPSWSKLSQFFRGRKNDAERYGKSAQENYQKEVIK
                     KQMKPIGCRRIIIYKI"
     gene            199..594
                     /locus_tag="VEV83_21485"
     CDS             199..594
                     /locus_tag="VEV83_21485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYK47770.1"
                     /translation="MYHNQSRALYGAAKLRHAHQFWQSHQRAAVNIYKTDASYQLLVF
                     APGRVKDNFSIKARGNELIISYQPPEGLPTPDWISREYSRGSFERSFTLDETVDATNI
                     KATYTDGVLQVSLPIIPGKQAPERDIEIN"
     gene            765..2120
                     /locus_tag="VEV83_21490"
     CDS             765..2120
                     /locus_tag="VEV83_21490"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47771.1"
                     /translation="MKKIFTIGVFLFLCNHAKAQSAGTDSLKILLATTTEDTSRVLLL
                     EDLSFSYQYSYPDTALHYAMQGLQLARRIGYPKGEGYCLNALGNVYLDIGNYPRALEL
                     YLDALKIREKLKGQREIAVTYSNIGTVYSEQGDHRQALNYISKTKQVDEAIKDSTGLM
                     IDLYNIGSLYQNLDMPDSALFYQEIAYHIAGLIHDHDYIGAIATAFGVAYKSMNNFPV
                     AIEFFRRGITYADIVSDRQVISKAYYGLAEIFRGQRSSDSAIANATQALSSARQASFL
                     KDVMQASLLLSDLFKEESRFDSALYYHELAMATKDSLFNVEKTKQIENLAYNEQLRQQ
                     ELSEEKIRAQKERADSLQLIGIAVFIVSFLFVLMLLGRREKHPRAVEFLALFALFLLF
                     EFVSFLVHPYLSRITHETPVYYLTVSVLLAASLTRLHERTTGLITRKVLHKPADPVHH
                     H"
     gene            2609..3286
                     /locus_tag="VEV83_21495"
     CDS             2609..3286
                     /locus_tag="VEV83_21495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47772.1"
                     /translation="MRILIVEDEPKVAAFLKHGLQELDYDVEVVYDGMMAKKIASSKS
                     FDIVIMDIIIPYINGIELCKHLKEIKPNVPVLMLTALGTTADKVAGFDAGADDYLLKP
                     FEFAELVARIKALTKRMHANGDPGNVLKAADLELDLNKKTALRAGKKIDLTAKEFSLL
                     EYFMLNKGRVLSRRSISEKVWDVSFDTQTNVVDVYVNILRKKIDRDFPVKLIHTRIGM
                     GYLFSEQ"
     gene            3289..4680
                     /locus_tag="VEV83_21500"
     CDS             3289..4680
                     /locus_tag="VEV83_21500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47773.1"
                     /translation="MQVREKLTYQFVAIVALILLAFSGAVYYFSADYREETLYDRLKS
                     RAVNVANLLINIDEVDSATLQKIEKNNPLSLPDEKIIVYNYKNQILFSTDHKNVFKIS
                     PKLLDDVRLNQEVRFEQKPYEMLGFLYTSKYDRFVVISGAIDVYGFKKLDNLSDILVA
                     SVAVCIIITFIAGSIYSRRALRPISGVINQVDNITASSMNLRVDEGNKKDEIAKLAET
                     FNKMLGRLEGAFLAQKNFIANASHELRTPLTVISGQLQVLLLRDRTAEDYKKNIASVL
                     DDVKNLNLIADRLLLLMQASVDTSVAGFTSVRVDEILWQAKKDITQMNDVYTVIITFD
                     PALDENHLTVSGNEQLIRSAVFNLLENGCKFSRDHKTEVHLTTHRNRLTMIFTDKGIG
                     IPAEELEFIFQPFRRGTNSTHIKGHGIGLSLVEKIIRLHKGSIDIKSEVNTGTVITIS
                     FSYDIFNSNLISA"
     gene            4733..5635
                     /locus_tag="VEV83_21505"
     CDS             4733..5635
                     /locus_tag="VEV83_21505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47774.1"
                     /translation="MFSTPKIIAAAATLLLAGAIITTLFFSKANNSLKEQLSTEKLNS
                     EKLLSEKLELKKNVDRANKDIDQFKTDINILQGTNTRLDLLLAASRKSLSEKLDEINR
                     LEQANADKKIIEKELADLRNMKKNYEGQITAMGSQLKTISSGDSALTEKNNALTEKIG
                     MLEMQNRELAANNELLKIMAADNYLVDGARGKMDKPTLIARRTNKLVLSFVVPEDLSP
                     NLRFNIIAPDGMVIDETDIHITTTLLTPEEDPKVIGTTKGGVKLGKSIRMEYNPRGKF
                     SRGIYKIEVFNSENYMGSCQVRLV"
     gene            6260..7189
                     /locus_tag="VEV83_21510"
     CDS             6260..7189
                     /locus_tag="VEV83_21510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47775.1"
                     /translation="MKKKTMIGGLAALFAITTVVFFACQKDATKSTSSSAVDNAKGGS
                     TAGAYDKPTITCGEATLSSIDIVVTAGGTGAPAGFSIQWMTLDDYDLYGWPACDGDIC
                     QSAPSFCKASFSGKANLSNYNLVAGQSVTVNIGDLLFDNGASTSCPGELQCGTSYVFR
                     CFAHGDSKKGQSKFGANLTCSTLPCDEACTHFGFGVWKQRCPDISGLTLGTHDYSPAQ
                     VCCILNNSPNPGNGLLIVAHQLIAALLNGVDPNNADVLNAQAYIGSAVLTQATNDDGS
                     CNDTNIGFKKAGDPESQFPGMIGRLKHANETCQ"
     gene            7414..7785
                     /locus_tag="VEV83_21515"
     CDS             7414..7785
                     /locus_tag="VEV83_21515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012793079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HYK47776.1"
                     /translation="MNKAAQTILFLFLSNTFMTFAWYGHLKFKQMNLFNNAGLAVIVL
                     ISWLIALPEYSFQVPANRIGFDENGGPFNIWQLKVLQEVITLIVFTLFSVIFFRSQPL
                     KLNYLIGFIFLILAVYFIFKK"
     gene            8107..>8840
                     /locus_tag="VEV83_21520"
     CDS             8107..>8840
                     /locus_tag="VEV83_21520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HYK47777.1"
                     /translation="MRQIAFREALREAMNEEMRRDDRVFLMGEEVAEYNGAYKVSQGM
                     LAEFGPKRIIDTPISELGFSGVAVGAAQNGLRPIVEYMTWNFAALALDQILNTASKML
                     AMSGGQIGCPIVFRGPNGSAGQLGAQHSTAFENIYANIPGLKVVSVSNGYDAKGLLKQ
                     SIRYEEDPVMFMESEVMYGDKSEVPDDEYYIELGKADIKRPGGDVTIVSFNKLMKVAL
                     GAAAELEKEDVSAEVIDLRTIRPLDW"
BASE COUNT         2588 a         1890 c         2047 g         2315 t
ORIGIN      
        1 cgcgcagagg gcagggaaca tattttagca tgccgtcctg gagcaaactg tcacagtttt
       61 tccgtgggcg caaaaatgat gctgaacggt atggaaaaag tgcgcaggaa aattatcaaa
      121 aggaggtaat taaaaaacaa atgaaaccga ttggatgtcg ccgcataatt atttataaga
      181 tttaaaaacg aaaacatcat gtatcacaat caatcacgcg cgctgtatgg cgctgctaag
      241 cttagacacg cgcatcaatt ctggcagtcg catcagagag ctgcagtgaa tatttacaaa
      301 acagatgcga gctatcaact tctcgtgttt gcacctggca gagttaaaga caacttcagt
      361 attaaggctc gcggtaacga gcttatcatc tcttatcaac cacccgaggg tttgccaacg
      421 ccggactgga tcagccgcga atacagcagg ggttcattcg agagaagctt tacgctggac
      481 gaaaccgtgg acgcgacaaa catcaaagcc acctacacag acggtgttct gcaggtgagc
      541 ctgccgatca ttccgggcaa gcaggcgccg gaacgcgata ttgagatcaa ctgaaatacg
      601 tttttcaaaa aaataaaaag ggtcttcatg tggaggcctt ttttagttgg tgatggcaac
      661 tgaatcgagg agaataacta gctttattgt acgtttaaca agcctcccaa atgctgccgc
      721 ctctcaatgt gaacgcgtct caccatgtct aactatccgt atacatgaaa aagattttta
      781 ccatcggcgt ctttttgttc ttatgcaacc acgcaaaggc gcaaagcgcc gggaccgaca
      841 gtctgaagat attactggca acaacaactg aagataccag ccgcgtgcta ttacttgagg
      901 atctgagttt ttcttaccag tattcatatc ctgatacagc attgcattat gcaatgcagg
      961 gcttgcaact ggcacggcgg atcggttatc caaaaggcga agggtattgt ctgaatgcac
     1021 ttggcaacgt ttatctcgac atcggcaatt atccccgtgc gcttgaacta tatctcgacg
     1081 cgttgaagat cagggagaaa ttaaagggtc aaagagagat cgcggtaaca tactcaaata
     1141 ttgggaccgt ttattccgaa cagggagacc accggcaggc gttaaattat atttcaaaaa
     1201 cgaagcaggt tgacgaagca attaaggata gcacaggttt aatgatagac ctgtacaaca
     1261 ttggcagcct ttatcaaaat ctggatatgc ccgattcagc tttattttac caggaaattg
     1321 cataccacat agccgggttg atccatgacc acgattatat aggcgcgatc gccacggcat
     1381 ttggcgtcgc atacaagtcg atgaataatt ttccggtggc catagaattt ttccggcgcg
     1441 gtattactta tgcggacatc gtgagcgacc ggcaagtaat ttcaaaagcc tattatggcc
     1501 tggccgaaat ttttcgcggg caacgctcga gcgattctgc gatcgctaat gctacacaag
     1561 ctttgtcgtc agcgcggcag gcttcatttt taaaagatgt tatgcaagcg tcgttgctgt
     1621 tatcggatct ttttaaagaa gagtccaggt tcgatagtgc tttatattac catgagttgg
     1681 ctatggcgac aaaagacagt ttgttcaacg tagaaaaaac aaagcagatc gaaaatcttg
     1741 catacaatga acaacttcgc cagcaggaac tttcggaaga aaaaatacga gcgcaaaaag
     1801 aacgggcgga tagccttcag cttatcggca tcgccgtgtt tattgtaagt tttttatttg
     1861 tcctgatgct gttgggtcgc agagaaaaac atccaagggc ggttgagttt ttagccctgt
     1921 ttgctttatt ccttttgttt gaattcgtga gttttcttgt tcatccgtat ttaagcagga
     1981 tcacccatga aacgccagtg tattatttaa ccgtttctgt gctgcttgcc gcgagcttaa
     2041 cgcggctgca cgagcgcaca accggactta tcacaagaaa agtattgcac aaaccagccg
     2101 atccagtgca tcatcattaa tatgcgatcg gtgaaatgtg atggcacgga tagaaaagca
     2161 ttcggaaacg cggctggcgc agcataaacg atgtcaataa aaagcccctg caaaaagcaa
     2221 ggggctcgat tgtcgtggag agattcccca cacggtcaat cgtaagttca aaggccaaaa
     2281 tgatctaagt attgactagt aacattcaat tgcgccggat gtccgcacct cgcaatggaa
     2341 taacctacat ttcggtttgt gcaattcata aacagaattg aattttgacg acttaataaa
     2401 aaacagctat ttaaataatg ggatttttgg cagaatcata ggtattgcaa taaaatcacc
     2461 ggcgtaaaga taatcgggaa ttaaataaca cgcaaaaaaa cgctgtcgaa tgcagccatc
     2521 tgtaataatc tgatcatcag ctccctttca accagttatt ttcggcatat cactaaaaaa
     2581 gctaattttg aaaggtccgt gcatctttat gagaattctg atagttgaag acgagccaaa
     2641 ggtagctgcc ttcctcaaac atggtttaca agaacttgat tacgatgttg aggtggtata
     2701 tgatggcatg atggcaaaga aaattgcgtc aagcaaatct ttcgacatcg tgatcatgga
     2761 tatcatcatc ccctacatca acggcattga gctttgcaag catctgaagg aaataaaacc
     2821 gaacgtacct gttttaatgc tcactgcact tggcactacc gcagataagg tggccggctt
     2881 tgatgcaggc gccgatgatt accttttaaa accttttgaa tttgcagaat tggtggcaag
     2941 gatcaaggcc ctcactaagc gaatgcacgc caacggtgat cctggaaatg tcctgaaagc
     3001 cgcagacctc gaattagatc ttaataaaaa aacggcgctt agagccggga aaaaaattga
     3061 cctgaccgcg aaagagttta gcctgcttga atacttcatg ttaaataaag gacgcgtgtt
     3121 atcacgcagg agcatttctg aaaaggtttg ggacgtttca tttgacacac aaacaaatgt
     3181 ggtggacgtt tacgtaaaca ttctgagaaa aaaaattgat cgcgatttcc ccgttaagtt
     3241 aattcacacc cgtattggaa tgggctacct cttcagtgag cagtaacgat gcaggtccgg
     3301 gagaaactta cataccagtt tgtggcaatt gttgcgttga tcctgctggc tttttcgggc
     3361 gccgtgtatt atttttctgc cgattatcgt gaggaaactt tgtatgaccg cctgaaaagc
     3421 agggccgtca acgtcgcgaa tttgctcatt aatatcgatg aagtagacag tgcaacttta
     3481 caaaagatcg aaaaaaataa tccgctgagc ttaccggacg aaaagattat tgtatacaac
     3541 tacaaaaatc aaatattgtt cagcacagac cacaaaaatg ttttcaagat aagcccaaag
     3601 ttgctcgatg acgttcggct caatcaagag gtacggtttg agcaaaagcc ctacgaaatg
     3661 ctggggtttc tgtatacaag caaatacgat cgtttcgtgg ttataagcgg agcgattgat
     3721 gtgtatggtt tcaaaaagct ggataacctg agcgacatcc tcgtcgccag tgttgcggtt
     3781 tgcatcatca tcacttttat cgcaggaagc atttactcga ggagagcgtt acggcccatt
     3841 tccggtgtaa ttaaccaggt ggacaacatc accgccagca gcatgaacct gagagttgat
     3901 gaaggaaaca aaaaagatga gatcgccaaa ttagctgaaa cattcaacaa aatgcttgga
     3961 aggctcgaag gtgctttcct tgcgcagaaa aattttatag caaatgcttc ccatgagttg
     4021 agaactccct taacagttat atccggtcag ttgcaggtat tattgttgcg cgaccgcact
     4081 gcggaagact acaaaaaaaa tattgcttcg gttttggacg acgtaaaaaa tttgaatctt
     4141 atcgcagacc ggctgttgct gttgatgcag gcaagcgttg acacctccgt cgctggtttt
     4201 acttccgtta gggttgacga aatattgtgg caggcaaaaa aggatataac acagatgaat
     4261 gatgtctaca ctgtaattat cacgtttgac cctgcgctgg acgagaatca ccttaccgtt
     4321 tcgggcaatg aacagctaat aaggtcggcc gtcttcaacc tgctcgagaa tggctgtaaa
     4381 ttttcccggg atcacaaaac ggaggtccac ctgacgacgc accgtaaccg gcttacaatg
     4441 atctttaccg ataaaggaat tggcatcccc gcagaagaac tggaatttat atttcaaccc
     4501 tttcgacgcg gcacaaacag cacacacata aaaggccatg ggatcggcct ttcacttgtt
     4561 gaaaaaatca tccgtctgca caagggttcg atcgacataa agtctgaagt aaatacaggg
     4621 actgttatta caatttcgtt ttcctatgac atttttaata gcaatttaat ctccgcttaa
     4681 ttccgtcttt aaccggtcgc attcatcttt gctttcgatt aaatacgggc atatgttttc
     4741 cacaccaaag atcattgcag cggccgccac tttgcttttg gccggcgcta tcatcacaac
     4801 cttgtttttt tccaaagcca ataatagcct taaagaacag ttgagcacag aaaaacttaa
     4861 ttctgaaaag ttgctgtcgg aaaagcttga attaaagaag aacgtcgaca gggccaataa
     4921 agacattgac cagttcaaga ccgatataaa tattttgcag ggcacaaata cgcgcttaga
     4981 cctgctgctt gcggcatcac gcaaaagcct ttccgaaaaa cttgatgaga tcaaccgcct
     5041 ggagcaggcc aatgcggata aaaagatcat cgaaaaagaa ctggctgatt taagaaatat
     5101 gaagaagaat tatgaaggac aaattacggc tatgggcagt cagttgaaaa caattagttc
     5161 aggtgattca gcattgacgg aaaaaaataa tgcgctcaca gaaaagatcg gcatgcttga
     5221 aatgcaaaac agggagttgg cggcgaacaa tgagctgctg aagatcatgg ctgccgataa
     5281 ttatcttgtc gacggcgccc gcggtaaaat ggacaaacca acgttgatcg cgaggcgaac
     5341 aaacaaactg gttttaagtt ttgtggtgcc tgaagatcta agcccgaatt tacggttcaa
     5401 tattattgcc ccggatggaa tggtgatcga tgaaacagac attcacatta cgaccaccct
     5461 gcttacgcca gaggaagatc caaaagtcat tggcacaacc aaaggcgggg tgaaactggg
     5521 caagtcaatt agaatggagt ataatccccg ggggaagttc agccgtggca tatacaaaat
     5581 agaagtattc aatagtgaga actatatggg tagttgccag gtaagactgg tgtaaagagt
     5641 ttcagatgtg tgtttaatag ccaggtagca tcgcccctgc gtggggcggt gtttactctg
     5701 cgtgcgaaat gatcaattgc ttgcgagggg ttcataaaac acaggggctc atgtagggaa
     5761 gcatcgttcc ggtcgggacg tcgccgggcc cctgtattat tttgtcgctg cccgttttta
     5821 atccgcctta tgaatttggg ctaataaatt ttaatcccat tttcatctcg ttttaatgtg
     5881 gtttttagaa gcaccaccca cctttgacgg ctattgaaaa ctgaaaccag tttgctaacg
     5941 cccaaaataa attgctaagt agacctggta tttagaacag gctcgcctgt agtccgcctt
     6001 taggggtgcg gcgttttaat ccgtggtatg acgtacaaaa tcgaaagctt attatttgta
     6061 cggatgtgtc gttcgcacat tccgatctca aacgtttttc ggcaacatcg acgtgagagt
     6121 tgcttattgc ctacacagcg accgtgtgtg tatcaaagaa gtcactcccc cccgcctgat
     6181 aattgacgtg aaaatcacga actaattgaa cacccaaaaa tcggatctca aacaaacatt
     6241 tcttaaaaca aaaagaatta tgaaaaagaa aacaatgatc ggcggtttag ccgccttatt
     6301 cgcaatcaca acggttgtgt tttttgcttg ccagaaagat gctacgaaat ctacaagcag
     6361 ctctgcagtt gacaatgcca aaggaggtag cacagcaggt gcttatgaca aacccacaat
     6421 tacgtgcgga gaagcaacac tctcatctat tgacatcgta gttaccgccg gcggaacagg
     6481 agctcctgca ggcttttcga ttcaatggat gacgttagac gattacgacc tttacggatg
     6541 gccggcttgc gatggagaca tttgtcaaag tgcaccaagt ttttgtaagg cctcgttttc
     6601 tggtaaagca aatttatcaa actacaattt ggtggctggt caatctgtga ccgtaaatat
     6661 tggcgattta ctttttgaca atggcgcaag cacatcttgt ccgggtgagt tgcagtgcgg
     6721 cacttcgtat gtgttcaggt gttttgcaca tggcgacagc aaaaaaggtc agagcaagtt
     6781 tggcgcaaac ctgacatgtt caacacttcc ttgcgatgaa gcctgcacgc actttggctt
     6841 cggtgtttgg aaacagcgtt gccctgacat ctcaggtctt acgttgggca cccacgatta
     6901 tagtcctgca caggtttgct gcatcctgaa taatagcccc aatcctggaa acggattatt
     6961 gatagtagct caccagttga tcgctgcatt attaaatgga gtggatccta acaacgcgga
     7021 tgtgttaaat gcgcaggctt atatcggcag cgctgttcta acgcaggcta ccaacgacga
     7081 cggaagctgt aacgatacaa atattggctt caagaaagct ggcgatccgg aaagtcagtt
     7141 ccccggtatg atcggcaggt tgaagcatgc taatgaaact tgtcagtaat actgatagat
     7201 tttaaatttt ctctctttac acggtcaatt tcagaaccgt tgctttctag caacggtttt
     7261 ttgttgcggt aacgcaacaa aatcgatagc agctaagaaa cgaacacgct cttaaagtga
     7321 ttaatcgccg ttagtcgacg tttaagcagg aaggtatatt ttttgaaaga cgatgcagac
     7381 gaaaataatt tcgcatagaa tcaaaatgct accatgaaca aagcggctca aacaattctt
     7441 ttcctctttc tctccaacac atttatgacg ttcgcttggt acggccacct gaagtttaag
     7501 caaatgaact tatttaataa tgcaggcctt gccgtgatcg tgcttattag ctggctgata
     7561 gcactacctg aatacagttt ccaggtgccc gccaacagga tcggctttga tgagaatggc
     7621 ggtcctttca acatctggca gcttaaagta ctgcaggaag taattacatt gatcgtgttt
     7681 acgctatttt ctgtcatctt cttcagaagc cagccgctta aactaaacta tttgatcggc
     7741 ttcatttttc tcatactggc tgtgtatttc atcttcaaaa agtaaacggt aattctcgtg
     7801 cggttcggcg aatccacccg gcaaactgcg ttacacccca ttagaaaatg aattctccgt
     7861 ttttcgcttt gcaggtttat ttttgctgcg aatttttttg tagggtcaga tgattccgtc
     7921 tatgagtgcg gtcagacgct tcaaaaagcg tcagaccggt ttccaatcgg atcgttttgc
     7981 gccacacgat tcggtctcga aatgagcgct gcatatgatc ggtttgacgg cgcgaagctg
     8041 tctgaccgca gcactcgtca agtcgagttt caaaagagcc tgaccgataa atcataaaac
     8101 cattctatgc gacaaattgc ttttcgcgaa gctttacgcg aagccatgaa cgaggaaatg
     8161 agaagagacg accgcgtttt tttgatgggt gaggaagttg ctgaatataa cggcgcttat
     8221 aaagtaagcc agggcatgct tgccgaattc gggcctaagc gaattattga tacgcctatt
     8281 tcagaactgg gattttcggg ggtcgctgtt ggagcagcgc aaaacgggtt acgcccgatc
     8341 gttgaataca tgacctggaa ttttgccgcg ctcgctctgg accagatttt gaataccgct
     8401 tcaaaaatgc tcgcaatgag cggcggacag atcggctgcc ctatcgtgtt ccgtggcccc
     8461 aatggaagtg caggtcaatt gggcgcacaa cattccactg catttgaaaa catttatgca
     8521 aatattcccg ggctaaaagt cgtttccgtt tctaacggct atgacgcgaa aggcttattg
     8581 aaacagtcta ttcgttacga agaagatcct gttatgttca tggaaagcga ggtgatgtat
     8641 ggagataaaa gcgaagtgcc cgatgacgaa tattatatcg aactcggtaa ggccgacata
     8701 aagaggccag gcggtgatgt aacgatcgtg tcatttaata aactgatgaa agttgcgctc
     8761 ggtgcggccg ccgagttgga aaaagaagac gtaagtgccg aagtgatcga tttgcgcact
     8821 atccgcccgc tggactggta
//
LOCUS       DASQJI010000822         3985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1515923,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000822 DASQJI010000000
VERSION     DASQJI010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515923"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            756..1214
                     /locus_tag="VEV83_21525"
     CDS             756..1214
                     /locus_tag="VEV83_21525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HYK47778.1"
                     /translation="MVVIKSHAEFESYLGKEIGVSPWHKITQEQINNFADATLDHQWI
                     HTDPERAQKESPFKTTIAHGYLTLSLVPFFWKQITDVQNLKMEVNYGIEELRFGQAVL
                     VNDEVRCRVSLKSIINLRGISKATLFIQLEIKDQAKHAFTADVLFLYHFK"
     gene            1535..2173
                     /locus_tag="VEV83_21530"
     CDS             1535..2173
                     /locus_tag="VEV83_21530"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HYK47779.1"
                     /translation="MITPSAIFLFSGVDIETIIRGGGLLIICLVVFAQTGLFFCFFVP
                     SGIFLFTGGMFVATGQLEHHLITVIICSVVACISGSVASYWFGWETGPLLYRKKDSKF
                     FRQKYLQAADIFYRKYGNIALTVGMLFPVTRTFAPIIAGIVKMNFSRFVLFAFLGSVL
                     WIPMFLVAGYLIGSLPGIKEYVGYVMVAIILLVTVPAVTRIVIGFKKAGKGY"
     gene            complement(2234..2836)
                     /locus_tag="VEV83_21535"
     CDS             complement(2234..2836)
                     /locus_tag="VEV83_21535"
                     /inference="COORDINATES: protein motif:HMM:NF040005.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6134 family protein"
                     /protein_id="HYK47780.1"
                     /translation="MVMLIKSARTFIVLCLFSFTSYGQVRTLEYDVSYKGKNIGTMQL
                     YQNQTGKNIFTKTVADVKTNLIFTIKVNTEEESMFQSGKLVYSNLIRRVNGKEKANKQ
                     TKAVADTYQTFSFGKPGPVNNEAIDYNFSLLYCMEPVNKQEIYSDNFQQFINIKKVSE
                     HQYKIELPDGNCNYYSFQNGICSNAELHHTFYTIHVTLKK"
     gene            complement(3132..3890)
                     /locus_tag="VEV83_21540"
     CDS             complement(3132..3890)
                     /locus_tag="VEV83_21540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HYK47781.1"
                     /translation="MDNSKDLRLAVLIDADNVPHRLINGILEEIAKYGVPTFKRIYAD
                     WTKPHVSGWKTVLLDHAITPVQQYSYTTGKNSSDSALIIDAMDILYTGRVDGFCVVSS
                     DSDFTRLATRLREAGMKVFGMGEQKTPSPFRAACDKFIYIEILETEAASTKQIKPSDV
                     QKKEKVISKTDKNLVNLVTSSINDIADENGWAFLGDLGNMLLKKRPDFDSRNYGFQKL
                     LQLIRSLGLFEIDERESGRRNIKLVYIRVIPSKI"
BASE COUNT         1189 a          818 c          790 g         1188 t
ORIGIN      
        1 acaaaagaga ttacagtata aatataaccg ccttcgcgga caatatgtgc tgcttcaggc
       61 ctattaattg gagcatctca tgttacagat ggtttacgaa tatgaggcgc tcaaagtgtc
      121 agtccgagaa tattgaggaa gctgaaccat ttattttttt taaaattgcg tacggcgatc
      181 agtaacaggt tttttatcat ctgacatctt tattatagtt catttaaagc gaagctctga
      241 tttcagtgag gtaagcgtca acaggtatcc caatgccaaa acgcttttta cacaaactag
      301 agaatgcttt gttgcaaact gttccaaact gaacggttca ccgtgcaaga gcgtacatcg
      361 gaggaggata tctgcagcac cgtgaaagca ctctcattta aaataagaaa taagaaacgc
      421 gaaagaagga attagaaagt gtgatagtac cgtccacgca acatttgctt gcatacaata
      481 gcgtaggcag gactacgatc ttttcaacaa aagatggcag atgttatagg caaacaattg
      541 gaccataaaa aacgatgctg gaaaatgctg taaaaatatt tatggaatca aagcgagttt
      601 tgtagctgtc cagtgcgaac gtccatatta aaacttatgc tgcggcatct gattcgctat
      661 accaataaaa aagacgtaaa aaaatattac gttccggcag aattgggcaa ccccaaaaat
      721 taaaaaaaac aaatcattct attatcttag ctgctatggt agttataaaa agtcatgccg
      781 aattcgaatc gtacctggga aaagagatcg gcgtatcacc ctggcataaa ataacgcagg
      841 aacagataaa caacttcgcc gatgcgaccc ttgatcacca gtggatacat accgacccgg
      901 aaagagcgca gaaagaaagc ccctttaaaa cgaccatagc gcacggttat ctcacactgt
      961 cccttgtacc ttttttttgg aaacagatca cagacgtaca aaatcttaag atggaagtaa
     1021 attacggcat agaagagctc aggttcggac aggcagtgct cgtaaacgac gaagtgcgtt
     1081 gcagggtttc gctcaaatcc ataatcaacc tcaggggcat cagcaaagca actttgttca
     1141 ttcaactgga aataaaggac caggcgaaac acgcctttac tgccgacgtt ttattcctat
     1201 accattttaa ataaaaggtg tcgtgctatt aacatcaaag atgctatgag tgggtaaggg
     1261 ccttaccttg tgaaatttgg tgccctgttc tgttcgtggc ttctgttctc tttgaaccac
     1321 taagcccgaa gacacaaaga cacactacaa attgagacgc gcacttttaa aaatcaatcg
     1381 cacgacacct ataaagatat ttgaccctga aatcgctcaa accgggtttt tccggatgcg
     1441 acgatcgtgg cacagccagc tgtaagataa aatcgcaact gcgcaagaaa caaggtaact
     1501 ttaattgctt ccttcacaaa cccgataatt aaagatgata acaccatctg ccatatttct
     1561 cttttctggc gttgacatag aaacaataat acgtggcgga ggactgctga tcatatgcct
     1621 cgtagttttt gcacaaacag gattattttt ttgcttcttt gtgcccagtg gcatattcct
     1681 gtttacagga ggaatgtttg ttgcaaccgg ccaactggaa catcatctta ttactgttat
     1741 catttgctca gtcgtggctt gtatatcagg atctgttgcc agttattggt ttggatggga
     1801 gacaggtccg ttgctctacc ggaaaaaaga ttccaaattc ttccggcaaa aatatctgca
     1861 ggctgctgat atcttctata gaaaatatgg aaacattgca ctgacggttg gaatgttatt
     1921 tccggttacc aggacttttg ccccaatcat tgcagggatt gtaaaaatga attttagccg
     1981 gtttgttcta tttgcatttc ttggttccgt gttatggata ccaatgttcc ttgtagctgg
     2041 ctatttaata ggcagccttc ctggtatcaa agaatatgtg ggctatgtta tggtagctat
     2101 tattctgctt gtaactgtac cggctgttac acgtattgtc atcgggttca aaaaagcagg
     2161 aaaaggttat tagcgcaaac gtaatcatac ctggcatgcg ctgaccctgc tttacgaaat
     2221 aattggaaca gggttatttt ttcaatgtta cgtggatagt atagaatgtg tgatgcagct
     2281 ccgcattact gcaaattcca ttttgaaatg aatagtaatt acaattgccg tcgggcaatt
     2341 ctattttata ttggtgttcg gagacctttt tgatgttgat gaattgctgg aaattgtccg
     2401 agtatatctc ttgtttattg acaggctcca tgcaatacag caaactgaag ttataatcta
     2461 tcgcttcatt gtttacaggt cccggttttc caaaagagaa tgtttggtat gtatctgcca
     2521 cagcttttgt ttgcttattg gccttttctt ttccgtttac tcttcggata agatttgagt
     2581 aaactaattt gccgctttga aacatggact cttcttcagt attcactttt atcgtgaaaa
     2641 tcaaattcgt tttcacatct gcaaccgtct tcgtaaaaat attcttgcct gtttggtttt
     2701 gatatagctg catagttcca atattttttc ccttgtagct tacatcatat tcaagcgttc
     2761 tcacctggcc gtaagaggtg aaggaaaaca agcaaagcac aataaacgtt cgggcgcttt
     2821 ttatgagcat caccatgaat gtagcgaata ttatttaata acagcagggt aaactaatga
     2881 ctaacagatc gcttagggca agcaacagag aggcaaaaac gcccaacgtc aggacaggaa
     2941 ctcacggctc gaaaacattt tcaaaggtag ttcaatggag ttctgaatgt acaagagggc
     3001 gacgcaacag acgctcaatg tagaaccgaa gctgggtaca taaaaatcaa atttcaaaca
     3061 ttgcacatgc tcaatcgttt acttcaccag actgcggcat cggggtgaaa ccattatccg
     3121 caacggatga atcaaatctt cgacgggata acccgtatat aaaccagctt tatatttctt
     3181 cttcctgatt cacgttcatc tatttcgaag aggcccaaac tccttatcag ttgtaataat
     3241 ttttgaaatc cataattgcg cgaatcaaaa tccggccgct tttttaataa catattcccg
     3301 aggtcaccta aaaacgccca gccattttca tccgcaatat catttatgct ggacgtaaca
     3361 agatttacta aattcttgtc ggttttgctg atcacttttt cctttttctg tacatcgctc
     3421 ggctttatct gttttgtact ggcggcctcc gtttccaata tttctatata aataaattta
     3481 tcacacgcgg ctctgaatgg cgaaggtgtt ttttgttctc ccatgccaaa gaccttcatg
     3541 cctgcttcac gcagtcttgt agcaagtctt gtaaaatcgc tgtcactgct caccacgcaa
     3601 aaaccatcaa ccctgccggt atataaaata tccattgcat caatgatcag cgcagaatca
     3661 gaagaatttt tacccgtggt ataactatat tgctgcaccg gtgtaattgc atgatcaagc
     3721 aatacagttt tccatcctga tacgtgtggc tttgtccagt cggcataaat gcgtttgaaa
     3781 gttggaactc catattttgc tatttcttct aatatgccat tgatcaggcg atgtggcaca
     3841 ttatcggcat caattaaaac agcaagccga aggtcttttg aattgtccat ttaagaaatc
     3901 tatttgcgga aagataataa taacgtgttg tgcttaacaa tttaagattt cttgaacttt
     3961 caacttcgtg aaccttagtg ccttg
//
LOCUS       DASQJI010000823         3149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1358475,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000823 DASQJI010000000
VERSION     DASQJI010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358475"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VEV83_21545"
     CDS             complement(<1..714)
                     /locus_tag="VEV83_21545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051604 - protein maturation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipase maturation factor family protein"
                     /protein_id="HYK47782.1"
                     /translation="MYKRRRTASLKGSAAFLCLARSSTGGQRNIRQKMDKESTMPHPV
                     PTYWLTRYVILRFLGIIYAIAFLVAINQIVPLIGSDGLLPVGTYLNQISDAMGPTAGF
                     FKLPSLFWFAHSDAALLIVAWLGFLLACIVVAGYANALMLFVLWFLYMSIVHVGQEWY
                     SYGWEIQLLETGFLAIFLCPLVDLRPFGKSAPPMPIIILFRWLIFRIMLGAGLIKVRW
                     DVNWRNGTALYYHFETQPIP"
     gene            complement(718..1035)
                     /locus_tag="VEV83_21550"
     CDS             complement(718..1035)
                     /locus_tag="VEV83_21550"
                     /inference="COORDINATES: protein motif:HMM:NF023174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3303 family protein"
                     /protein_id="HYK47783.1"
                     /translation="MVTWRLHPEKRDAAIEGFARMTAEDDKRDMGENIKLIGRWHDMS
                     EGTGVAICESDDPLAMATWALHWGTVLDLQTRVVLNDEEARAVGKKRIEELENLKATV
                     IQN"
     gene            complement(1208..>3149)
                     /locus_tag="VEV83_21555"
     CDS             complement(1208..>3149)
                     /locus_tag="VEV83_21555"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK47784.1"
                     /translation="TVDSLKTVLSTLGDSPQKVDLLLQLSQANQSTSLTDAVDYASSA
                     RDLAAKLNYQQGLGNSYRFLGNYYKRLGKYPESIDAYSQGLEVFTETKDLVGQSIMLN
                     NFGSLYTAQGQDAKALDYYFKALKLGEEAQDNKRIVTTLSNIGNIYLNNGATNKKALE
                     KALEYFLRALPIANELKDDQIIGTVTVNIGEVYMNDDKNDSALFYFRQSLNAFANTGD
                     VCYTLNDIGTLYEKTKKYDSALTYHKRALTIATNLGSQEDMAGSLLGIAQIYYGQHKI
                     RDALSAYQKAKDIATTLDLKYQLREAYKGLTACYEQLHDYANSFKYQSLLLAVKDSIY
                     SNETNEKLARIEFNSQIEKKQTEIDLLTKDKLLKDSELRRQTTARNAVSVGLILVFII
                     AFILLRGYRNKVKTNKILDQQKEEIENLVLNILPAEVAQELKENGHAEPKYFDFVSVL
                     FTDFRSFTKIADELSPQEVVTELNECFIAFDDIIEKYGLEKIKTIGDAYMCAGGIPTK
                     NEDHPIKIVKASFEIMEFVKARNNRRHAMGLPPWDLRIGIHVGPLVAGVVGRKKYAYD
                     IWGSTVNIASRMENNGEPGHVNVSSAIFELVKDRYQCTYRGKIYAKNIGEIDMYFIEK
                     ELSEKQDMRPLVDEPATVPTTA"
BASE COUNT          840 a          737 c          656 g          916 t
ORIGIN      
        1 gggaatcggt tgtgtttcga aatgataata taatgcagtg ccattacgcc aattcacatc
       61 ccagcgaact ttgataagtc cggcgccaag cataatgcga aatatgagcc aacgaaataa
      121 aataattatc ggcatgggtg gcgcgctttt gccgaatggg cgcagatcaa cgagcggaca
      181 tagaaaaata gccagaaagc ctgtttcaag aagttggatc tcccatccat acgaatacca
      241 ctcctgccca acatgcacta tcgacatgta aagaaaccac agaacaaaga gcattaaggc
      301 atttgcatac ccggcaacca caatacacgc aagtaaaaat ccaagccatg caacgatgag
      361 cagtgctgca tcggaatgcg caaaccaaaa gagtgaaggc agtttaaaaa agccagccgt
      421 tgggcccatg gcatcactta tttgatttaa gtatgtgcca acgggcagaa ggccatcaga
      481 gccgatcaac ggaacaattt gattgatggc aaccaggaaa gcgatcgcat aaattattcc
      541 caggaaacga agaattacat aacgtgtgag ccaataagtt gggaccgggt gaggcattgt
      601 agactcctta tccatctttt gccgaatatt tcgttgtccg cccgttgatg aacgggcaag
      661 acacaaaaat gccgcagagc ctttcaaaga agcagttctg cggcgtttgt acactgatca
      721 gttttgaata acagtcgctt taagattttc taactcttca attctttttt taccgaccgc
      781 tctcgcttcc tcgtcattga gcaccactct tgtttgaaga tcgagtacag tgccccagtg
      841 gagagcccac gttgccattg caagtggatc atcggattcg caaattgcta cgcccgtgcc
      901 ttcgctcatg tcatgccatc tgccaatgag cttaatgttt tcacccatgt ctctcttatc
      961 atcttcggca gtcatcctcg cgaatccttc aatcgctgcg tcgcgctttt ccggatgaag
     1021 acgccatgtt accataaatt tcacagttac ctccttgtgt tttgattttt aaaaaatgcg
     1081 gaaatatgta atgggaaagc ttaccaaata taaacttttg aaagcacgaa atgaaattaa
     1141 ttcagccaca tgtcaaagcc ggcgaattcc atcatacaag gctttgcaat ttttttgaag
     1201 ccgtccgtta tgccgtagtc ggaacggtag cgggctcatc aaccaacggc ctcatgtcct
     1261 gtttttcaga aagctctttt tcgataaaat acatatcgat ctcgccaata ttctttgcgt
     1321 agatcttgcc gcggtatgta cactggtacc gatctttcac caattcaaaa attgcggaag
     1381 aaacgttaac atgtccgggc tcaccgttat tttccatccg gcttgcaatg tttacggtgc
     1441 tgccccaaat atcgtaagcg tatttcttgc gtcccaccac accggcaacc aagggcccaa
     1501 cgtgaatgcc gatacgcagg tcccagggag gcaagcccat cgcgtgacgc cgattgtttc
     1561 tcgcctttac aaattccatg atctcgaagc ttgcctttac gatcttgatc gggtgatctt
     1621 cgttcttcgt cggtataccg cccgcacaca tatatgcatc tccgatcgtt tttatttttt
     1681 caagtccata cttctctatg atgtcatcga atgcgataaa acattcattc aattcagtaa
     1741 ccacttcctg cggggaaagc tcatccgcta tttttgtgaa gcttctgaaa tctgtgaaca
     1801 acaccgaaac aaaatcaaaa tattttggtt cggcatgacc attttctttc agctcctgcg
     1861 caacttctgc aggcagaata ttgagtacga ggttttcaat ttcttctttt tgctgatcga
     1921 ggatcttgtt cgtctttact ttatttctgt aacctctcaa caatatgaat gcgataatga
     1981 agacaagtat aagccctacc gaaacagcat ttctcgcagt cgtttgccgc ctgagctcag
     2041 aatctttcag gagtttatct tttgtaagca agtctatttc tgtttgcttc ttttcaattt
     2101 gagaattgaa ttcaatgcga gcaagctttt catttgtttc attgctgtaa atagaatcct
     2161 ttactgcaag caggagcgat tggtacttga aagagttagc gtaatcatgc agctgttcat
     2221 agcaggcagt aagtcctttg tacgcttccc gcaattgata cttaaggtca agagtggttg
     2281 cgatatcttt tgctttttga tacgccgata atgcatcgcg tattttgtgc tggccataat
     2341 agatctgcgc tattcccagc agcgaacctg ccatatcttc ctgtgatcca agatttgttg
     2401 cgatggtcaa tgcacgcttg tgataagtta atgcggaatc gtattttttt gttttttcat
     2461 acagggtgcc gatatcgtta agggtataac acacatctcc ggtgttcgca aaagcattca
     2521 acgattgcct gaaataaaaa agcgcagaat cgtttttgtc atcgttcatg tacacttcac
     2581 cgatattaac cgtgacagtg ccgatgatct ggtcgtcctt cagctcgttt gcgattggta
     2641 atgcacgcag gaagtattcg agcgcttttt caagcgcctt tttgttggta gcaccattgt
     2701 taagataaat gttcccaatg ttgctaaggg ttgtaacaat tcgcttattg tcctgcgcct
     2761 cctcacctaa cttgagcgcc ttgaaataat aatcaagcgc ttttgcgtcc tggccctggg
     2821 cagtatataa acttccaaaa ttgttcagca tgatcgattg cccaacaagg tccttcgttt
     2881 ccgtaaaaac ttccaggcct tgcgaataag cgtcaattga ctccggatat tttcccaatc
     2941 ttttgtaata gttaccgagg aaacgatagg aatttccgag gccctgctga tagttcaatt
     3001 tagccgccag atcccgggca gaacttgcat aatcaactgc atctgtaagt gaagtgctct
     3061 ggttcgcctg gcttaattgc aataacagat cgaccttttg aggggaatcg ccgagcgtgg
     3121 ataagactgt tttcaggctg tcaactgtc
//
LOCUS       DASQJI010000824         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3050036,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000824 DASQJI010000000
VERSION     DASQJI010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3050036"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1995)
                     /locus_tag="VEV83_21560"
     CDS             complement(<1..1995)
                     /locus_tag="VEV83_21560"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK47785.1"
                     /translation="MKKIYSFWQSFALSISLLFVSYYAQAQTNTFPSTGSAGIGTTTP
                     DALSILEMISTSKGLLIPRMTKTQRDNIAIVPPTGLLIYQTNSTPGFYYYNGSAWTAV
                     TPKAKGWSLTGNAGTNPATNFIGTTDGQALVFKINNQKAGYLDHLNGNSGFGYQTLNA
                     NPSGSYNTAIGFWALFSNTTGYYNTATGGYALQNNTGGIGNTANGISALRNNTSGSDN
                     TGAGANTLFHNTTGYSNVAVGSNALFNNSFSHNNVAVGDSALYNESGEIGAFGLITGN
                     NVAIGSKALYSNTLGGSNTANGHAALYTNHEGNYNTALGEAALYSNMNGYNNTATGVD
                     ALKYNVGGHDNTAFGTATFNANIAGSNNTVVGSGADANLDGYNNSSAFGSTSAITASN
                     QVRIGNSSVTSIGGYAGWTTLPSDKRVKKNIKENVPGLAFINKLKPVTYNLDITAIDK
                     IIQRPAIKDKDGKTIQPSAEELTATKKKEQIIYTGFVAQDVETAARSLNYDFSGVDAP
                     KNDKDLYGLRYSDFVMPLVKAVQELSKMNDEKDAAIQQQRIEIADVKSRLAKIEAIMS
                     VQQSTSTIKLPRLNNAVAQETSNISSASLEQNTPNPFSNTATINYSLPARFSSAQIII
                     TDNSGKVLKQVNVSGSGKGSVQINAATLSAGAYQYSLLVDG"
BASE COUNT          556 a          420 c          405 g          682 t
ORIGIN      
        1 tccatccacc aataatgaat attgataagc tcccgctgaa agtgttgcag catttatctg
       61 cacagaacct ttaccgctgc ctgaaacatt tacctgcttt aaaacctttc ctgaattatc
      121 agtgatgata atttgtgctg atgaaaacct tgccggcaaa ctgtagttga ttgttgctgt
      181 atttgaaaaa ggattagggg tattttgttc tagtgaagcg gaagaaatgt ttgatgtttc
      241 ctgcgcgact gcattattga ggcggggaag tttgatggtc gatgttgatt gctgaacact
      301 cattatggct tcaatctttg caagccgtga cttgacatct gcgatctcaa tcctctgctg
      361 ttgtattgct gcatctttct catcattcat cttactcaat tcctgcactg ctttcaccag
      421 cggcataaca aaatcggaat aacgcaaacc gtataagtct ttatcatttt tgggcgcatc
      481 aacaccgctg aaatcatagt ttaaagatct agcagcggtt tctacatcct gggcaacaaa
      541 tcctgtatat ataatttgtt ccttcttttt tgttgctgtc agttcttcag cagaaggctg
      601 aatggttttg ccgtctttat cttttatggc aggacgttgt ataattttat caattgcagt
      661 tatatcaaga ttataagtaa caggttttaa cttgttgatg aatgcaagcc cgggaacatt
      721 ttcttttata ttctttttta ctcgcttatc tgaaggaagt gtggtccagc ctgcataacc
      781 accaatagat gtgacagaag aattgcctat gcgtacctgg ttgctcgctg tgattgccga
      841 ggtactacca aatgcgctgc tattgttata tccatctaaa ttagcatcag cgcccgatcc
      901 tactactgta ttattgctgc ctgcaatgtt agcattgaac gttgcagtac caaaagctgt
      961 attatcgtgc ccaccaacat tatacttcag tgcatcaaca cctgtagctg tattattata
     1021 gccattcata ttggaatata aagcagcttc tcccagcgcg gtattataat ttccctcatg
     1081 gtttgtgtat aatgcggcgt gaccattagc tgtgttagaa cctccgagtg tgttactgta
     1141 taaagcttta gaaccaatag caacattatt tcccgtaata agtccaaacg ctccaatttc
     1201 tccactttca ttatataaag cggaatcacc tactgctaca ttattgtgac tgaaagaatt
     1261 attaaacaat gcgttcgagc ctacagccac attgctataa ccggttgtat tatgaaataa
     1321 agtattagct cctgcaccgg tattgtcgct gccgcttgta ttgttgcgaa gagcagagat
     1381 gccatttgct gtgttaccga ttccgccagt attattttgc aatgcatatc ctcctgttgc
     1441 ggtattatag taacctgtag tgtttgaaaa aagcgcccaa aatccaattg ctgtgttata
     1501 agatcctgac ggattagcat ttagagtttg atatccaaat ccggagttac cattaagatg
     1561 atcgagatac ccggccttct gattgtttat tttaaaaacc agcgcctggc catcagtagt
     1621 accaatgaag tttgttgccg gattagtacc cgcattgccg gttaatgacc aacctttcgc
     1681 cttcggtgtt actgctgtcc atgcgctgcc gttatagtaa taaaaaccag gcgtgctatt
     1741 ggtttgataa atcaataatc cggtcggtgg aactatcgct atattatcac gctgtgtttt
     1801 cgtcattctt ggtataagca gcccctttga agtagaaatc atttcaagaa tggataatgc
     1861 atcgggtgtt gtagtgccaa tacctgcact gcctgtagaa gggaaagtgt tcgtctgtgc
     1921 ctgagcataa taactcacaa ataaaagaga aatgcttaat gcgaagcttt gccagaatga
     1981 gtatattttt ttcataaatg atttttactt tttgaaagaa ttttatagaa attatatatg
     2041 cttatcgcag cagttccatt ttt
//
LOCUS       DASQJI010000825         4513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2130550,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000825 DASQJI010000000
VERSION     DASQJI010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2130550"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            393..836
                     /locus_tag="VEV83_21565"
     CDS             393..836
                     /locus_tag="VEV83_21565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HYK47786.1"
                     /translation="MKKTHIIALLLIAVAIAVLISFMGNVTTYETIASAKEKPGKFVN
                     IIVKVDKSKPMTYDPVKNPNFLEFTALDTLGNSMQVVYHNSKPTDMEKSERVVLKGRV
                     EGDHFECKDILLKCPSKYKDDPSAKKDVSAVMNRNVQPADKTHTD"
     gene            836..3286
                     /gene="ccsA"
                     /locus_tag="VEV83_21570"
     CDS             836..3286
                     /gene="ccsA"
                     /locus_tag="VEV83_21570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HYK47787.1"
                     /translation="MKYNGEHLFPGQLGHFLAVLSFVASIVATIAYFKAARTNILSET
                     SSWKRLARGAFAIETVAVFGIFATLYFIISNHYHEYYYAWNHSSRALEKKYLFASFWE
                     GQEGSFMLWNIWHCVLGWILIWRSKKWEPPVMMVVSLAQVCIATMLLGIYFFDAKIGS
                     NPFALLRNELQAPIFSNPDYLQLPKIYQGNDLNTLLQNYWMVIHPPILFLGFASTIVP
                     FAFAIAGLMKNDHSWTKVAIPWAAFSGAVLGTGIMMGAAWAYESLSFGGYWAWDPVEN
                     ASLVPWIVMIAGLHTNLVYKSSGYSLKSTYIFYIVSFSLVLYSTFLTRSGILGDTSVH
                     AFTGADMTIQLVCFVLLFFVPAMILYFYRRRSIPSIKKEESTYSREFWMFIGALVLFL
                     SALIITAKTSIPVYNKIFGTNVAMPEDPVFSYNQVQVFIAIIIGTLTAVTQYLKYKNT
                     PKEIFFRKLWFPTLMALVISLNISLFGGISYDKKGPGYMVAVHIAMFAAVYGVIANLS
                     YIWIGLKGKMKSAGASIAHIGFGLALVGILISSSKKTVLSQNTTGIALFQKTKDEDPA
                     ENITLFKGTPTDMGKYDVTYARDSVNPGERKKYFELAFKGKNDNEQFSVFPDVMENNK
                     GQEGFSANPDKKHYWDRDIFVYVSSWQQGKTDDTSQFRPVEMKAGDTAFYSNGMIVLN
                     AVDKDPEHLKKILLPGEVGVGMDMTVIAKDGRQYKAMPAVGLKENSLRNIPDTVLAQN
                     LIIRFNKLADANANKIELGIKEDKGIQDIITLKVYEFPFINVLWIGIVIMVLGFIVSI
                     VQRLKTYNLKQAAKNNIS"
     gene            3449..4003
                     /locus_tag="VEV83_21575"
     CDS             3449..4003
                     /locus_tag="VEV83_21575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018610876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4294 domain-containing protein"
                     /protein_id="HYK47788.1"
                     /translation="MGLRNFGPNDTIVVEACVEANGDTIPCSWLEDAYVTGKLRGVYK
                     KRYAEWTRLRNAVYVTYPYAIAASKVMNDINAQLVNVSDKQKRKAIIQSKEKELKTEF
                     ADKIQQLSVYQGRVLMKLIYRETGNNCYEIIEDYKGKFNAGFWQTIALVFGSNLRQTY
                     DPVVQDHDMEMIVQDVEKMYGRHG"
     gene            4183..>4513
                     /locus_tag="VEV83_21580"
     CDS             4183..>4513
                     /locus_tag="VEV83_21580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HYK47789.1"
                     /translation="MKVDILAFGAHPDDVELGCSGTLIAAKAQGKITAVVDITRGELG
                     TRGTAETRDCEAANAAKIMGVHARENLTMPDGFFHDNDTNVRKVIEVIRKYQPEIVLC
                     NAPEDRHP"
BASE COUNT         1308 a          986 c         1038 g         1181 t
ORIGIN      
        1 ataaaaatgg caaacatcca tccgaatcaa tacaagccac tagccacaat gtaccctgat
       61 ttgtttctct atctatgtgt ggcgtgcatc ttagtcaatg ggacgatgaa gttttttcgg
      121 aggtgaagcc tgctccaata agaattccgc tattagaatc tatcagcccg tgctgataag
      181 aaatcaaccg ctcaatggct acgggattgc agcgattacc cggctgaagg cttgcgcgca
      241 ggctagtggc ggagtaaaag cggaaagccc gaaccacaga ccacgattga gcgaatgccg
      301 aaagccccaa atctttctta acaaattctc taaggcgccc acatcctttc tcatgccgtt
      361 ttaagttaat ttcgcatcct taattcccgg tgatgaagaa aacgcacata attgcactgt
      421 tacttattgc agttgctatt gcagtattaa taagtttcat gggcaatgtt accacttacg
      481 aaaccattgc ttctgccaaa gaaaagccgg gcaaattcgt aaacatcatt gtgaaggttg
      541 ataagtcgaa gccgatgaca tacgatccgg ttaagaaccc aaacttccta gaatttactg
      601 cactcgatac cttaggcaac tcgatgcagg tcgtttatca caattcaaaa cctaccgata
      661 tggaaaaaag tgagcgggta gttttgaagg gaagagtgga aggcgaccat tttgagtgta
      721 aagacatctt gctcaaatgc ccatccaaat ataaagatga cccgtccgca aaaaaagacg
      781 ttagcgctgt gatgaaccgc aatgtccagc ctgcagataa aacgcatacc gactgatgaa
      841 gtataatggc gaacaccttt tcccgggaca gctcggtcat tttctcgcgg tactttcttt
      901 tgttgcttct atcgttgcca cgatagctta tttcaaagca gcgcgcacga atattttatc
      961 agaaacatcc agttggaagc ggcttgcacg cggcgcgttt gcgatagaga ctgtggcagt
     1021 attcggaatt tttgctacgc tgtattttat tatctccaat cactatcacg agtattatta
     1081 tgcatggaat cactcttcgc gtgcgttaga aaaaaaatat ttattcgcga gtttttggga
     1141 agggcaggaa ggaagcttta tgctctggaa catctggcat tgtgtgctgg gatggatcct
     1201 gatctggcgc agtaagaaat gggaaccacc ggtgatgatg gtcgtgagcc ttgcccaggt
     1261 ttgtatagcg accatgctcc ttgggattta tttttttgat gcgaaaattg gcagcaatcc
     1321 attcgcgctg ctgagaaatg aattacaggc tccgatcttt tcaaaccccg attacctgca
     1381 gttgccgaaa atctatcaag gcaacgacct gaatacatta ctgcagaatt actggatggt
     1441 gatccatccg cctatccttt ttctgggctt tgcatcaacc atcgtccctt ttgcattcgc
     1501 gatcgcagga ctgatgaaga atgaccatag ctggacgaaa gttgcgatac cctgggccgc
     1561 tttttcagga gcggtgttag gaacaggcat tatgatgggc gctgcatggg cttatgaaag
     1621 cctgagcttc ggtggttact gggcctggga cccggtggaa aatgcttctc ttgttccgtg
     1681 gattgtcatg atagccggtc tgcatactaa tctcgtgtac aaaagcagcg gctattcctt
     1741 aaagagtaca tacatttttt acatcgtgtc gttttcgctg gtattgtact caacgttctt
     1801 aacgcgcagc ggaattttag gcgatacgtc tgtgcatgca ttcacgggag ccgacatgac
     1861 gatacaactt gtttgctttg ttctgctgtt tttcgtgcct gcgatgatct tatatttcta
     1921 tcgcagaaga tcgatccctt cgatcaaaaa agaagaaagc acatacagcc gcgagttctg
     1981 gatgttcata ggcgcgctgg tgttgttctt atcggcgttg atcatcactg caaaaacgtc
     2041 aatacctgtt tataataaaa ttttcgggac gaatgtcgcc atgccggaag atcctgtttt
     2101 ctcttataac caggtgcagg tgtttattgc aatcatcatt ggcacactca ctgccgtcac
     2161 gcaatacctc aaatacaaaa acactccgaa agagatcttc tttcgtaaac tttggttccc
     2221 cacactcatg gcgctggtca taagcctgaa cataagtttg tttggtggca tcagctacga
     2281 taaaaaaggt cccgggtata tggtcgctgt tcacattgca atgttcgctg cggtatatgg
     2341 tgtgatcgct aacttatctt atatctggat cggcttaaaa ggcaaaatga aatccgcagg
     2401 cgcatcaata gcgcacatag gctttgggtt ggcattggtt gggatcctaa tttcatcgag
     2461 taagaaaacc gtgctcagtc aaaacacaac gggcatcgct ttgtttcaaa agacgaagga
     2521 cgaagacccg gctgaaaata ttactctatt caaaggcacg ccgacagaca tgggcaagta
     2581 cgatgttacc tatgcacggg actcggtgaa tcccggtgaa cgaaaaaaat attttgaact
     2641 ggcgtttaaa ggaaaaaatg acaacgaaca gttttccgtt tttccggatg tgatggaaaa
     2701 taataaaggc caggaaggat tctcagcaaa ccccgataaa aaacattatt gggaccgcga
     2761 catttttgtt tatgtctcat catggcaaca gggaaaaacg gatgatacgt cacaattcag
     2821 gccggttgaa atgaaggcag gcgacactgc attttattcg aatggaatga tcgttctgaa
     2881 tgctgtcgat aaagatccgg agcacttaaa gaaaatactg ctgcccggcg aagtaggtgt
     2941 cggaatggat atgacggtga ttgcaaaaga cggaaggcag tacaaagcga tgccggcagt
     3001 aggtttgaaa gaaaatagcc tcagaaatat tcccgatact gtccttgctc aaaacctcat
     3061 cattcgtttc aataagctcg ctgacgcgaa tgcaaataag atcgagttgg gcataaaaga
     3121 agataagggc atccaggata tcattacact gaaagtgtat gagtttcctt ttatcaacgt
     3181 gctttggatc ggcatcgtca tcatggtcct cgggtttatc gtaagcattg tgcagcgatt
     3241 gaaaacgtac aatctaaaac aggcagccaa aaataacatt tcataaaggt tacttttttt
     3301 ggggtttcac gataaatcat ggcaatcatt ctatatttac gtacccttta tgcaaccgca
     3361 acactttcat aaagttttcc tcaacgcact gctatgtctt tcatgcctgt gttttgcggc
     3421 gcattcttca gcacaaaata aaccgacggt gggcctcaga aattttgggc caaacgacac
     3481 gatcgtggtg gaggcttgtg tggaagccaa cggagatacc ataccttgtt cgtggcttga
     3541 agatgcctat gtaaccggca aacttcgcgg tgtttataag aaacgttatg cggaatggac
     3601 gaggttacgc aacgccgtgt atgtaaccta tccctatgct atcgcggctt caaaagtgat
     3661 gaatgacatc aacgcgcagc tcgtaaacgt gtctgacaag caaaaaagaa aagccatcat
     3721 tcaatcaaaa gaaaaagaac tgaaaacaga atttgccgac aagatccaac agctttcagt
     3781 ataccaggga agagttttga tgaaactcat ctatcgcgaa accggcaaca actgttacga
     3841 gatcatcgaa gattacaaag gaaaattcaa tgcgggtttc tggcagacga tcgcattagt
     3901 attcggttcc aaccttcgcc aaacctatga cccggtcgtg caggaccatg atatggaaat
     3961 gatcgtgcag gacgttgaaa agatgtacgg gcgccacgga tgaaatggtg aatggtcaat
     4021 tgtgaattgt caatgtcggt ttcatttcta atttccaaac taactttcgc gacaaaacat
     4081 cactccccca aataacgtca aagttgaaac atcccaataa ccgactaaac caataaacca
     4141 actaacccaa aacctcatac tttttctctt tatttttaac gcatgaaagt tgacatactc
     4201 gcctttggcg ctcatcccga cgatgtggaa ctcggatgtt ccggcacatt gatcgcggcg
     4261 aaggcacagg gaaaaataac agcggttgta gacattacac gcggcgaact cggaacgcgt
     4321 ggtaccgcgg aaacaaggga ctgcgaagct gccaatgcgg cgaaaataat gggcgttcac
     4381 gcacgtgaaa acctaacaat gccggatggg ttctttcacg acaatgacac gaatgtgaga
     4441 aaggtgatcg aggtgatcag gaaatatcag ccggaaatcg ttttgtgtaa tgcgcctgaa
     4501 gatcgtcacc cgg
//
LOCUS       DASQJI010000826        10885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1359179,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000826 DASQJI010000000
VERSION     DASQJI010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10885
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1359179"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..152
                     /locus_tag="VEV83_21585"
     CDS             9..152
                     /locus_tag="VEV83_21585"
                     /inference="COORDINATES: protein motif:HMM:NF013067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47790.1"
                     /translation="MDEEKNNRRSTGVRQINSDDSPVTILIVPTNEELEIAKQCYALL
                     KKV"
     gene            955..1353
                     /locus_tag="VEV83_21590"
     CDS             955..1353
                     /locus_tag="VEV83_21590"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47791.1"
                     /translation="MKQNPVVHFEMPYEDSERLTKFYSEAFGWQMHKFGPEMGDYVTA
                     GTTETDEHRMVKTPGAINGGFYPKKAPGAAPNPSVVIAVDDINDAMKRVRDAGGNILG
                     EPVEIPGVGHYVSFTDTEGNRASLLQPLKM"
     gene            complement(2071..10791)
                     /locus_tag="VEV83_21595"
     CDS             complement(2071..10791)
                     /locus_tag="VEV83_21595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HYK47792.1"
                     /translation="MKLKLIPSAHELISNMRAFFQIGEAKLSYSNEEPLREELFSFSQ
                     MERFGKTLAAKHKLSTKRANDRLLKRLADNEMILQEVRKLLTDSIKRKYQLTPAGEWL
                     IDNFYLIEEHIRIAKTHFPKDYSEGLPQLVDSAGTLRVYDIVLQIISHSDGRIDIESM
                     SSFVKAYQTVSNLQLGELWAIPLMLRLALIENIRRVSARIAIDRVDKNLADYWAEQMI
                     EVGEKDPKSLILIIADMVRSNPPMVSAFVSELIRQLRGKGPDLAMPLNWIELQLSESG
                     LTSTELVNAENQKQAADQVSISNSIGSLRLLGAMDWREFVETHSIVEQTLREDNGGIY
                     GLMDFATRDRYRHVVEAIAKKGALSEHEVASLAIRLAHENVSRIDKDEERTAHVGYYL
                     VGNGLPQTKKLAKLRTSGAEKMRQMIARHSFAVYLAFIFLITLTISAGILLRAYSDTK
                     NSSLLAVLAFLTLLCASQLAISIVNFFSTLLVKPNLLPRMDFSHEIPSGFRTLVVIPT
                     MLTTVDEIEKLVEALEVRFLANRRDNLHFGLLTDFTDAKHETLPADQLLLDVAQQRIE
                     DLNKKYKREKDDLFFLFHRPRKWNSRENVWMGYERKRGKLSELNSLLRGDRKDYFSHI
                     TGDQSILQNIKYVITLDADTEMPLGSACKLIGTMAHPLNRPWYDEKKKRVTKGYGILQ
                     PRVAVSLPDITGSLYARMHGNEPGMDPYTRASSDVYQDLFEEGSFIGKGIYEVDTFIK
                     GLEGRFLENRILSHDLLEGCYIRSGLVSDVQLFEKYPTTYSADMKRRSRWIRGDWQIF
                     YWLFPIVPGYGRHLHKNPVSGLSRWKIFDNIRRSLVPLALTALLLLGWLVLPSTLFWT
                     ITVSGIIVFPIFITSLWDTLRKPKDVILIHHIKNSIRSLGDIVQKTVFTLITLPYEAF
                     SNLVAIARSLWRMLVTRKNLLEWDPSYAGNANPRSLYASYSSMWIEPLLGLGLFMFLA
                     IYSPAKAFIAGPILLLWLITPFITWFISKPLKKQVTILSNQQNMFLQKLARKTWSFFE
                     RFVVVEDNWLPPDNFQEQPVEQIAHRTSPTNIGLSLLASLTACDFGFITPGQLIERIS
                     NTISTMEKMERYKGHFYNWYDTKSLNSLFPKYISTVDSGNLCGHLLVLKQGLLDIPSQ
                     KIPVAKLFEGLRDTLLLLTDTLKVNDIELLKQFTEELESACNADLVTGSDIKKHLESL
                     EKNFRVVYGKLNNDPQSETFRWKQLLNDQLEHAIEHAQIFTPWFLLMTAPDKYADLVS
                     MNANSSLIELEKTAQELQAEVNRKQTSTNTADENHWLELLQTALTNSIHKANELISAA
                     GDLAQRCNELADMEWDFLYEKSSHLFTIGYNVQERIKDASYYDLLASEARLCTYVCIA
                     QGKLTEESWFALGRLLTNINGNSVLLSWSGSMFEYLMPLLVMPTYENTLLDQTYKGVV
                     NCQIQYGKQTGLPWGISESGFNLINAESHYQYRAFGDHRLGLKRGLEEDSVIAPYASA
                     LALMVSPEKACENLTLLAEKGFEGRYGFYEAIDYTTSRLAPGQSSSTIYSFMAHHQGM
                     SLLSLAYLLLDKPMQKLFESDPQFKAILLLLQERIPKTSAFFAHTTDIADINYAASGQ
                     ETRIIVTPNTSMPAVQLLSNGRYHVMVTNSGAGYSRWKDLAVTRWREDVTCDNWGTFC
                     YIRDLKSETFWSNTYQPTLKKADKYEAAFSQGRVDYHSVNNEIETHTEIVVSPEDDIE
                     MRRVLITNRSGSRKTIEVTSYAEVVLASPASDVIQPAFSNLFVQTEILPLQHAIICTR
                     RPRSADEQSPWLFHLMTMQGKEVEEISYETDRMEFIGRGNTTVNPRAMRYSGPLSGRQ
                     GSVLDPIVAIRYKIKLDAEEKITIDLVTGVADTKSICKNLVGKYQDKHHKDRVFELAW
                     THSQVVLRQINASEADAQLYGRLAGSILFTNASLRADPAILITNRRGQSGLWGYSISG
                     DLPIVLLKIESQANMNLVKQMVQAHAYWRLKGLAVDLVIWNEEHNIYRQVFQNEIQAL
                     IPAELRDRPGGIFVRASDQISNEDRILFQTVARINISDSGGTLMDHVKRKIPAQAIVP
                     YISAKQTHLPSLTHVPLPNDLIFFNGTGGFSADGSEYIIAIDDKNKTPAPWVNVIANP
                     NFGTVVSESGTAYTWTENAHELRLTPWNNDPVCDTGGEAFYLRDEESGHFWSTTLLPA
                     AGQSTYITRHGFGYSLFEHIENGIYSEMSVYVDIQEAVKFCVLKISNQSGRPRTLSAT
                     GYTEWVLGDNRMKTAMHIHTEIDPDSGALFAKNPYNTEFSQRVAFFDVDYLKKSFTAD
                     RTEFIGRNGTLKNPDAMLRAKLSGKTGLALDPCAAIQVPFYVADGEEQEIIFRLGTGR
                     DFAHASALAKQSRGSMVAHESLEKVKTYWKNTVNALQVETPDTGINLITNGWLTYQTL
                     SSRLWGRSGFYQSGGAFGFRDQLQDVLSLLHAAPALARQQILRCATRQFKEGDIQHWW
                     HPPIGRGVRTRISDDFLWLPFVTSLYISHTEDFAILDEVSPFLEGRLLNEGEESYYDL
                     PVISSTSTTLYGHCVQALKHGFNFGKHGLPLIGTGDWNDGFDKVGIEGKGESVWMAFF
                     LYEILIRFAETARLYKDAAFADDCEREAQELKRNIDKYAWDGEWYKRAWFDNGTPLGS
                     SINEECKIDSITQSWSVLSGAGNKKRIYIAMESAYKNLVQKDAGIIQLLEPPFDKSDL
                     NPGYIKGYVPGVRENGGQYTHAAIWMIIAFAKLGDNKRVWELLNMINPINHGKTSNEI
                     GIYKVEPYVLAADVYALSPHAGRGGWTWYTGSAGWLYRLITESFLGLQREGNKLKIVP
                     CVPEEWESFKVHYRYKNTVYRILVTQQNNAGKMIVTVDGANQEDRSITLTDDGQEHNV
                     EIEIYAQRELPTTVEEQSRS"
BASE COUNT         2986 a         2420 c         2269 g         3210 t
ORIGIN      
        1 gtatccgcct ggatgaagaa aaaaataacc ggcgatcaac aggagtcagg caaataaaca
       61 gcgatgattc cccggtaaca attttaatag tccccacaaa cgaagagctt gagatcgcga
      121 aacaatgcta tgcgttgttg aaaaaggttt aaaaattcgc gacgttttgc aaatgaatat
      181 tgatttattg atccgcggat ttcatgcgcg gttaatcagc tttcgccact tcggggctgg
      241 taattggagc acaacggaca caatggtggc acgaaggtca cggcgcgaga cgacgtgcaa
      301 agtatcggaa agcggagatg ctctgtgcaa cattggttaa tcgacggatt tcatccccgg
      361 ttaatcagct ttcgtgcctt cggggctggt agttggagca catggataca cgaagaacac
      421 aacgcgagga cgagccgcaa ggtatcggaa agcggagatg ctctgtgcaa cattggttaa
      481 tcgacggatt tcatccgggg ttaatcagat ctcgcccctt cggcgctggc tgttggagca
      541 caacggacac aatggataca cgaagaacac aacgcgagga caagccgcaa ggtatcggaa
      601 agcgcagatg ctctgtgcaa ctccgtgata aactctgcgc aactctgtgg tttaaaaaat
      661 tcaccacaca catacaacag gtaattgcat agagtgcgca gatacttaca agaattatga
      721 gacacaaaca acacatcggt tactcttttc aacacacatt gtgtacgtcg tggcttcgtt
      781 atagccttcg tgacccacaa aaatttcttg acgcatccat agcctggata ttaaatttta
      841 ctgccatcgg taacgacatc ttcgacgatc atcatactaa atttctaact ttatcggtcg
      901 caaaaaacag caaggttttt gctgaaaatt cactccacac aaaaatcaaa atcaatgaaa
      961 caaaatcctg tagtgcattt tgaaatgcca tacgaagaca gcgagcgcct tacgaaattt
     1021 tattcagagg cctttggctg gcagatgcac aaattcgggc ccgaaatggg cgattatgta
     1081 accgccggca caacagaaac agacgagcac aggatggtaa aaacgccggg cgctattaat
     1141 ggaggcttct atcctaagaa agcgccaggt gctgcgccaa atccgtcagt cgttattgcc
     1201 gttgacgata tcaatgatgc catgaaaaga gttcgtgatg cgggtggtaa tattctcggt
     1261 gagccggttg agatccccgg tgtcggccac tatgtttcat tcaccgatac tgaaggcaac
     1321 cgcgcgagcc ttttgcagcc cttaaagatg taacgataga cagatatccg ttgtgttcga
     1381 aattgagcat cgaccgtcgg catctaaatt ttcagcaacc aatttttaaa tcttcatgtg
     1441 cttgggcgca tcgacctcgc atcgccgcgc tgaaaggcag tactagcttt cgtgcatctc
     1501 ggtgatcatt aacgagaaca tcaacttaaa aagtagagta tccctaacaa gaaaaaaagg
     1561 gcgaccagaa cgagtgaaaa cgtgttttga agctttttct gtctcacgct ttccgctgat
     1621 tttgacctga agacgctgtc cttgtcaaaa tacagccaac ggtatatctt tttccccctg
     1681 aatcgggcga tgaaatggac ggtttttatt attataacaa cagcagcagc tatgagaatg
     1741 atcgtttgaa atatagtgag ctctttcata gtggttacaa atcaatatac actttactga
     1801 cagtgcctga aaactaagtt tttgcgtggt ctcattttga agagattttg caaaggaaag
     1861 gtttctaact cgtatttgga ctgaggatta tcattgaccc ataaacctgg taccatccgc
     1921 atatggatgt ctgtatttta gtggtttgat acaaggtcag atgatcttta taaattcggc
     1981 agtgtgtaaa tgtgagtaat ttatttgatc atttattttg tcttatagaa atttcttcag
     2041 tataaagtat agtttgaaaa acaatgcagg ttaactgcgg gattgttctt caactgtggt
     2101 aggcaactcc cgttgtgcgt atatttcaat ttcaacattg tgctcctgcc catcatctgt
     2161 aagcgtaata ctcctgtctt cttggtttgc accatcaacc gttacgatca ttttccctgc
     2221 attattttgc tgtgtgacaa gaatccgata aaccgtgttt ttatagcgat aatgcacttt
     2281 aaatgactcc cattcttccg gaacacaagg aacaattttt aacttatttc cttcccgctg
     2341 cagaccaaga aaagattctg tgatcaaacg atatagccaa ccggcagaac ccgtgtacca
     2401 cgtccatcca ccgcggccgg cgtgcggtga taatgcataa acatctgctg caagcacata
     2461 aggctctact ttatatatgc caatttcatt tgaagttttg ccatgattaa ttggattaat
     2521 catattcaat aactcccaaa cgcgcttgtt atcgcccaat tttgcaaagg caatgatcat
     2581 ccaaatggcg gcgtgagtgt attggcctcc gttttctctt acgccgggca catacccttt
     2641 tatgtacccc gggtttaaat cagatttatc aaaaggtggt tctaataatt gaatgatgcc
     2701 tgcatctttt tgcaccaggt ttttgtatgc agattccatg gctatgtata tgcgcttttt
     2761 atttcctgct cctgataaaa cagaccagct ttgtgtgatt gaatcgatct tacactcttc
     2821 attaattgaa gaacccaatg gagttccgtt atcaaaccag gcgcgtttgt accattctcc
     2881 atcccaggca tacttatcaa tatttcgttt taactcttgt gcctctcttt cgcagtcatc
     2941 tgcaaatgct gcatctttat atagtcgcgc cgtttctgcg aaacgaatga gaatctcata
     3001 cagaaagaaa gccatccata cgctttctcc tttcccctcg atgcctactt tgtcgaatcc
     3061 gtcattccag tcgccggtgc ctatcaaagg cagcccatgt ttgccaaaat tgaagccgtg
     3121 tttgagagcc tgaacacagt ggccatacaa cgtcgtggat gtacttgaaa taaccgggag
     3181 atcataataa gattcttccc cctcgtttaa caagcggcct tcaaggaagg gagacacttc
     3241 atcaagtatt gcgaaatcct ctgtatggga aatataaaga gaggttacaa aaggcaacca
     3301 gagaaaatca tctgaaatgc gggtgcggac tccgcggccg attggcggat gccaccaatg
     3361 ctgtatatct ccttctttaa attgacgcgt tgcacaacgt aaaatttgtt gacgtgctag
     3421 tgccggtgct gcatgaagca gcgataatac atcctgcaac tgatctctga aaccaaaagc
     3481 gccacccgat tgataaaatc cactgcgtcc ccaaagccgt gacgataatg tttggtaagt
     3541 gagccaacca tttgttataa gattaattcc tgtatcaggc gtttccacct gcaaagcatt
     3601 gacggtattt ttccaatagg ttttcacttt ttcaagtgat tcatgtgcca ccatgcttcc
     3661 cctggattgt ttggccagcg cgcttgcatg agcaaaatct cttccggttc cgagcctgaa
     3721 aataatttcc tgttcttctc catcggctac atagaaagga acttgaatag ctgcgcatgg
     3781 atctaaagcg agcccggtct ttcctgaaag ttttgcgcgt aacatcgcat cagggttttt
     3841 caatgttcca tttcgtccaa taaattcagt gcgatcagca gtgaatgatt ttttcaaata
     3901 atccacatcg aaaaatgcaa cacgttgaga gaactcagtg ttgtatggat tttttgcaaa
     3961 cagcgctccg ctatcaggat caatttctgt atgaatatgc attgctgttt tcattctatt
     4021 atcgccaagc acccattctg tgtagccagt agccgatagc gtacgcggcc tgccggattg
     4081 attgctaatt tttaatacac agaacttaac agcttcctgt atatccacat agaccgacat
     4141 ttccgaataa attccatttt cgatatgttc aaaaaggctg taaccaaaac catggcgtgt
     4201 aatgtaagtt gattgacctg ctgcaggaag aagtgtggtt gaccaaaaat ggccactctc
     4261 ttcatcacgc aggtaaaatg cttctcctcc tgtgtcacat acaggatcat tattccaggg
     4321 tgttagccgt aattcgtgag cattttctgt ccaggtatat gcagttccgc tttctgaaac
     4381 tacagttccg aaattcggat tcgctatcac atttacccag ggagcaggcg ttttgttttt
     4441 atcatctatg gcaataatat actcgctgcc atccgcggaa aaaccaccgg ttccattaaa
     4501 aaagatcaga tcgtttggta gaggaacatg tgttagagaa ggtaaatgag tttgttttgc
     4561 gctgatataa ggaacgatcg cctgcgcagg tattttgcgt ttaacatgat ccatcaaggt
     4621 gccaccacta tctgaaatat taatacgggc tacggtttga aataatattc gatcctcatt
     4681 tgatatctgg tccgaagctc ttacaaaaat gcctcctggc cggtccctta attcggcggg
     4741 aattagtgcc tggatctcat tttgaaaaac ctgccggtaa atgttatgct cttcgttcca
     4801 tataaccagg tctactgcaa gtccctttag ccgccaataa gcatgcgcct gcaccatttg
     4861 ttttaccagg ttcatgttcg cctggctttc aatttttaaa agaacaatgg gcagatctcc
     4921 cgaaatagaa tatccccata aacccgattg tcccctgcgg ttagtgataa gaattgccgg
     4981 atcggcacgc aatgatgcat tggtgaataa tatagaacca gcgagacgtc catacaattg
     5041 cgcatcagct tctgaggcgt tgatttgtcg cagaactacc tggctgtgcg tccaggccag
     5101 ttcgaacaca cggtctttat gatgtttatc ctggtatttt ccaaccaggt ttttacaaat
     5161 gctttttgta tcggcaacac ccgtaaccaa atcgattgta attttttctt cggcgtcaag
     5221 ttttatttta tagcgaattg caacaatggg gtctaatacc gagccctggc gtccggacag
     5281 tgggcctgaa taacgcatgg cacgtggatt taccgttgtg tttcctctgc caataaattc
     5341 catccgatca gtttcatacg atatttcctc aacctctttt ccctgcatcg tcatcaaatg
     5401 aaataaccat ggtgattgtt catcagctga gcgtggcctc cgtgtacaga tgatggcatg
     5461 ttgaagtggt aggatctcgg tttgtacgaa aagattgctg aacgccggct gaatcacatc
     5521 cgaggcggga gaagcaagaa caacttccgc ataacttgtt acctcgatag ttttgcgact
     5581 gccggaacgg tttgtaatga gaacccttcg catttctata tcatcttccg gagacacaac
     5641 aatttcagta tgcgtttcta tttcgttatt gacggaatga taatcaaccc tgccctggga
     5701 aaatgcagct tcatatttat ctgctttttt aagagtcggc tgataagtat ttgaccagaa
     5761 agtttcactc tttaaatcac gtatataaca aaatgttccc cagttatcgc aggtaacatc
     5821 ctccctccaa cgcgtaacag ccaggtcttt ccaacgacta tacccggcgc ctgaattcgt
     5881 taccatcaca tggtatctgc cattcgataa taactgcact gcaggcatcg atgtattcgg
     5941 cgtcacgatt attcttgttt cctggccact tgctgcgtaa ttgatatctg ctatgtctgt
     6001 tgtgtgtgca aaaaaggctg atgttttcgg aattcgttcc tgcagcaaca gaagtatcgc
     6061 cttaaactgt ggatcagatt caaaaagttt ttgcattggt ttatcaagaa gcaaatacgc
     6121 caatgacaga aggctcattc cctggtgatg cgccatgaat gaataaattg tagaacttga
     6181 ttgtccgggc gctaacctcg acgttgtata atctatggct tcataaaatc cgtatcgtcc
     6241 ttcaaatcct ttttctgcaa gcagcgttag gttctcacat gctttttccg gtgataccat
     6301 caatgctaat gcggatgcgt atggagcgat aacggaatct tcttcaaggc cgcgtttcaa
     6361 tccaaggcga tgatcgccaa atgcgcgata ttgataatgg gattcggcgt ttatcaaatt
     6421 aaaaccggac tccgaaattc cccacggcag gccagtctgt ttaccatatt ggatctggca
     6481 gtttacaacg cctttatagg tttgatcaag caatgtattt tcgtaagtcg gcattactaa
     6541 aagtggcatc aagtattcga acatagaacc actccacgaa agaagaacag aattgccgtt
     6601 tatgtttgta agtaaacgtc caagtgcgaa ccaactttct tccgttagtt ttccctgtgc
     6661 aatgcacacg taggtgcaca accttgcttc ggatgcgagc aggtcataat aacttgcatc
     6721 cttaatccgt tcctgcacat tgtagccaat cgtaaacagg tggcttgatt tttcatacag
     6781 aaaatcccat tccatatcag cgagttcatt gcatcgttgt gcaagatctc cggctgcact
     6841 gattagctcg ttagccttgt ggattgaatt cgttaaagca gtttggagca gttcgagcca
     6901 atgattttca tccgcggtgt tggttgaagt ttgtttacga ttgacttcag cttgtaattc
     6961 ctgtgcggtt ttttctaatt cgatcaagga ggaatttgca ttcatcgaaa caagatctgc
     7021 gtacttatcc ggcgcagtca ttaacaaaaa ccatggagta aatatttgtg catgttcgat
     7081 tgcatgctct aattggtcat tcagaagttg cttccaccga aaggtttcac tctgcgggtc
     7141 attatttagt tttccataaa caacacgaaa gtttttctct aaagactcaa ggtgtttttt
     7201 tatgtcactg ccggtaacca aatcggcatt gcatgcggat tctaactcct ccgtgaattg
     7261 tttcagcaac tctatgtcat ttacctttag tgtatcggta agtaaaagca gcgtgtcgcg
     7321 gagtccttca aataattttg caaccggaat tttttgagac ggtatgtcaa gtaaaccttg
     7381 ctttaatacg agtaaatgac cacagagatt tccactgtct actgtagaaa tatatttcgg
     7441 aaataatgag tttagtgatt ttgtatcata ccagttgtag aaatggcctt tgtatcgctc
     7501 cattttctcc atggtgctta tggtatttga tatccgttca ataagttgac cgggagttat
     7561 gaaaccaaag tcgcatgctg ttaagctggc aagcagcgag aggccgatgt tcgtaggcga
     7621 ggtgcggtgt gcaatttgtt caaccggttg ttcctggaaa ttatccggtg gcagccagtt
     7681 atcttcaaca acaacaaaac gttcaaagaa actccatgtt tttcttgcga gtttctgaag
     7741 aaacatgttt tgttgattgc taagaatggt tacctgtttc tttaaaggtt tacttatgaa
     7801 ccatgtaata aacggggtaa taagccacag cagcagtatg gggccagcta taaatgcttt
     7861 cgccggggaa tagatcgcta aaaacataaa caaacccaaa cccagcaagg gttcaatcca
     7921 catggaagaa taagaggcat ataagcttct tggatttgcg tttcctgcat aggaaggatc
     7981 ccattcaagt aagttctttc ttgttacaag cattctccag agtgaacgtg ctattgccac
     8041 caggttggaa aatgcttcgt aaggcagggt gatcagtgtg aatacagttt tttgtacaat
     8101 atccccgaga cttcgaatag aatttttaat atgatgtatt aaaatgacat ctttcggttt
     8161 tctcaatgta tcccagaggg aagtaataaa aattggaaac acaataatcc ccgagactgt
     8221 tatggtccag aataaagttg atggcaacac caaccatccc agtagcaata gggctgtaag
     8281 ggccagcggt acaaggctac gccttatatt gtcaaatatt ttccatcgtg ataatcctga
     8341 aaccgggttc ttgtgcagat gccttccgta gcccggaaca atcgggaaca accagtagaa
     8401 gatctgccag tctccgcgaa tccagcgcga gcgccttttc atatcggcac tgtacgtggt
     8461 gggatatttc tcaaacaatt gcacgtcgct tactaacccg gagcggatat agcaaccttc
     8521 caaaagatca tgactgagaa tacggttttc caaaaatctt ccttcaagcc ctttgataaa
     8581 tgtgtctact tcgtaaatcc cctttccaat aaaagaaccc tcttcaaata gatcctggta
     8641 aacatctgaa gatgcacgtg tataaggatc catgcccggc tcatttccat gcatacgggc
     8701 gtataatgaa cccgtaatat ccggtaagct cactgctacc ctcggttgga gtatgccata
     8761 accttttgtg acccgtttct ttttttcatc ataccacgga cgattcagcg gatgagccat
     8821 cgttccgatt aatttacagg ctgaccccaa aggcatttcg gtatctgcat cgagcgtgat
     8881 cacgtatttt atattttgga gaatagactg atcacctgtg atatgcgaaa aataatcttt
     8941 tcgatctcca cgcaacagtg agtttaattc tgaaagtttg ccgcgctttc tttcgtaccc
     9001 catccataca ttttcgcgtg aattccattt gcgcggacga tgaaaaagaa aaaacagatc
     9061 atccttttct cttttatatt ttttattgag gtcctcaatt ctttgctgtg caacatctaa
     9121 gagtaattga tctgcaggca acgtttcgtg ctttgcatct gtgaaatcgg ttaataagcc
     9181 gaaatgtaaa ttgtctctcc tgtttgcgag aaaacgaacc tccagggcct caactaactt
     9241 ttctatttcg tcaaccgtag tgagcattgt tggaattaca acaagcgttc tgaaaccgga
     9301 cggaatctca tgtgagaaat ccatccttgg caacaaattt ggcttgacca ataatgtaga
     9361 gaaaaaattg acaatagaaa tcgcaagttg gcttgcgcat aataatgtaa gaaaagcaag
     9421 tactgctaat agcgaactat tttttgtatc cgaatatgct cttaataaaa tgcctgcact
     9481 aatcgtaagt gtgataagaa aaataaaagc taagtaaacc gcaaaagagt gccttgctat
     9541 catctggcgc atcttttcag ctccggacgt gcgcagtttc gcgagttttt ttgtttgagg
     9601 taagccattc ccgaccaggt agtaaccaac atgtgcggtg cgctcttcat ctttatcaat
     9661 cctggataca ttttcatgtg ctaaccgtat ggccaggctg gcaacttcat gctcgcttaa
     9721 tgcgcctttt ttggcaatag cctccacaac atgccggtaa cggtcacgcg tagcaaaatc
     9781 cattaaacca tagatgcctc cattgtcttc tcgtagcgtt tgctcaacga tgctatgtgt
     9841 ttcgacaaat tcacgccaat ccattgcacc cagcaagcga aggctgccga tgctgttact
     9901 tatagaaacc tggtctgcag cctgtttttg attttcagca tttacgagtt cagtgcttgt
     9961 taacccgctt tctgataatt gcagctctat ccagttaagt ggcatcgcca ggtcaggacc
    10021 ttttccccgc aattgacgta ttaattcaga tacgaatgcg ctcaccatgg gaggattgga
    10081 tcgcaccatg tccgcaatta tcaatatcag gcttttagga tccttctcac ccacttcaat
    10141 catttgttcc gcccagtaat ctgcaagatt tttgtcaacc ctgtcaatag cgatccttgc
    10201 tgaaacacgc cttatgtttt cgatcagtgc aagccgaagc ataaggggta ttgcccataa
    10261 ttctcctaat tgtaaattag aaacggtttg gtacgctttc acaaaactgc tcatgctttc
    10321 aatatctatc cttccatcgc tgtgagaaat tatctggagc acgatatcat atacacgcag
    10381 tgtgccggca gagtctacaa gttggggcag cccttcgcta taatcttttg gaaaatgtgt
    10441 ttttgcaata cgaatatgtt cttctatcag gtagaaatta tcaataagcc attcgcctgc
    10501 gggtgtaagc tggtactttc tttttattga atctgtgaga agtttgcgaa cctcctgtaa
    10561 gatcatttca ttgtccgcaa gccgtttaag caaacggtcg ttcgcgcgtt tcgtactcaa
    10621 tttatgtttt gctgccaggg ttttgccaaa acgttccatc tgcgaaaagc tgaataattc
    10681 ttccctgagg ggttcttcgt tcgaatagct gagcttagcc tcacctattt gaaagaatgc
    10741 cctcatattg gatatgagct cgtgcgctga tggtatcaat tttaatttca tccgttttat
    10801 ttaaaacctg gcaaccggca tgttttctta atattttatg cggcggactt tgataaaaaa
    10861 ttgcctaatg gatcttatta gaatc
//
LOCUS       DASQJI010000827         2721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1054730,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000827 DASQJI010000000
VERSION     DASQJI010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054730"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VEV83_21600"
     CDS             complement(<1..407)
                     /locus_tag="VEV83_21600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYK47793.1"
                     /translation="MKATCLHTSLLSCIIVLIGSAALQPTPAAAQNLLDPLSQPKFVN
                     PLPIPSVIDGRNGGTFTVSISQFKQDLGLRDPATGAPMLTKVWGYNGSYPGPTIVAKK
                     NVPLQFYWSNDLYDPSTLKPLHHLLPIDTTIEWA"
     gene            959..>2721
                     /locus_tag="VEV83_21605"
     CDS             959..>2721
                     /locus_tag="VEV83_21605"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK47794.1"
                     /translation="MKNIIILVFNFCLLGTTSAQNKNDISGEINDNRFNHVGGATVYL
                     LNTNYATVSNDSGRFTLKDVPLGDYTMQVRAIGFSSVSINIDLTEGAVKNLQITLPDE
                     ANQLDDVVVSAEKRDESLQKIAGSVTSLSSAQVQQYRLWNAKELTAIVPNMFSNNSGD
                     ERNVTSIRGITTTSYDPAVTTYVDGVNQFSLDTYIPQLTDVERIEVLRGPQGTLYGRN
                     AMGGVINIITKQPTNKMDAFVELTAGNYDLQRYSAGIRTPLIKDKLFFGGSVMFNKRD
                     GYYTNEFNNTSFDKQHGFNGNYYLKFIPVASWAFTINVKSQDTRNDGAFPLVFGVDEA
                     LSNPFKLAQNAVGTMADNTLDASLVANHSGTTFNFSSQTSWQHNRRIYESPLDADFSP
                     LDGITIANDFGDHWNNVKVFTEELRFTSPANRASAFKWTVGSYFFTQDNPAKQASHFG
                     TDALLFGAPDSNFSIINSSTGKNTGIAFYGQANYSINNKLELIAGMRYDYENKKLGVK
                     EEYQKDGEEAFTIQPDTSSSVHFSAISPKLGLAYHATDNNNFFATYSRGYRTGGLTQL
                     SLDPSQPPLYPYKPEYSDNIEA"
BASE COUNT          772 a          551 c          627 g          771 t
ORIGIN      
        1 gcccattcaa tggtggtgtc gatgggcaat aaatgatgca gcggttttaa tgttgaggga
       61 tcatacaaat cgtttgacca gtaaaattgc aacggtacat ttttctttgc aacaatggtt
      121 ggcccgggat aactgccatt atagccccac acttttgtaa gcattggagc acctgtggct
      181 ggatcgcgca acccaaggtc ttgcttgaat tgacttatag aaacggtgaa tgtacctcca
      241 ttgcggccat caattaccga tggaattggc agtggattta caaactttgg ttgtgaaagt
      301 ggatcaagca ggttttgtgc agcggccggc gttggttgca gggcggctga cccgattagc
      361 acaatgatgc atgataataa gctcgtatgt aaacatgtcg ctttcatgac tgtgaatttt
      421 gagtgtcgaa aagtttaaat gtatttaaga cgcttaggaa tttctgtgat ggaagtcaga
      481 gaagagaatg attgtggtca aaccgatgcg tgcggctttg atgccgctaa ctggcacata
      541 cgagatattt tcgttgcggc taaaagacgg cattatgcat attgaagtct gatcggcttt
      601 accggtgata tctcctggca ctccttgtgt ggatacgagt gtggacttgc gacaggtgca
      661 tggtttttgt tttggattga gttgacacat attcgattcg aatccttaag aaaataaatc
      721 ctatgatagt tccattaata gcgttcgttg ccgttgttgc aattgtggtt atatatcttg
      781 taaataatgc taaaaagaag gatcgcggta accggcctac ttagcgtttt aattttgctt
      841 tcgctatatt ttagaaacga gcaatttttt gttcagcccg atttcgtttg tgtaaatgca
      901 gcgtcgattc ttcgctccct gatgtagttt tgcgggcggc ttatatcgcc atccaaaaat
      961 gaagaatatc atcatactcg tattcaattt ttgcctgctc ggtacaactt cggctcaaaa
     1021 caaaaatgat atttccggtg agataaacga taacaggttc aaccatgttg gcggtgcgac
     1081 cgtgtacctg ctgaatacca actacgcgac ggtatcaaac gatagcggcc ggtttacttt
     1141 aaaagatgtg ccgcttggtg attataccat gcaagttcgc gccattggtt tttcaagtgt
     1201 tagcatcaat atagacttaa cggaaggcgc ggttaaaaac ttgcagataa cattgccaga
     1261 tgaagcaaac caactcgacg atgtggtagt ttctgcggaa aaaagagatg aatcgttgca
     1321 gaagatcgct ggtagtgtaa cgtcattatc ttcggcgcag gttcaacaat acaggttatg
     1381 gaacgccaaa gagttaaccg cgattgtgcc aaatatgttc tccaataatt cgggtgacga
     1441 gcgaaacgta acttcaataa gaggcatcac gacaacttca tatgatccgg cggtcacgac
     1501 ttacgtcgat ggcgtaaatc agttcagcct ggatacttat attccacagt tgaccgatgt
     1561 tgaaaggata gaagtacttc gtggtccgca gggtactcta tatgggcgta atgcgatggg
     1621 cggtgttatc aacatcatta caaaacaacc gacgaataag atggatgcat tcgtggaact
     1681 gacagcaggc aactacgatt tgcaacgata tagcgctggc atcagaacgc cgcttattaa
     1741 agacaaactt ttttttggcg gctcagttat gttcaacaaa cgggatggct attacacaaa
     1801 tgaatttaat aacacttctt tcgacaaaca gcatggattt aacggtaatt attatttgaa
     1861 gtttattcct gttgcgagct gggcgttcac aattaatgtc aaaagccagg acacaaggaa
     1921 tgatggtgct tttccgcttg tttttggggt tgatgaagcg ttgtcaaacc cattcaagct
     1981 cgcgcagaac gcggtgggaa caatggcgga caatacgctc gatgcctcac ttgtggcgaa
     2041 tcattctggt accacattta atttcagttc acagacttca tggcaacaca atcgtcgcat
     2101 ttacgaatcg cctctcgatg cggatttttc tccgttggat ggaattacga tcgcgaatga
     2161 ttttggcgat cactggaaca acgtaaaagt tttcactgaa gaacttcggt ttacatcgcc
     2221 tgccaatcgt gcatctgcat ttaaatggac tgttggcagt tatttcttta cgcaagacaa
     2281 tcctgcaaaa caggcatcac attttggaac tgacgcgctg ttattcggtg cgcctgacag
     2341 caacttttcc atcatcaatt cttctacagg aaaaaataca ggcatcgctt tttatgggca
     2401 ggcaaattat tcaatcaata ataaattaga attgattgca ggcatgaggt atgattacga
     2461 aaacaagaaa ctcggagtga aagaagaata tcaaaaagac ggcgaggaag cttttactat
     2521 tcaaccagac acgtcgtcat ccgttcattt cagcgctata tcgccgaagc ttgggctggc
     2581 gtatcatgca actgacaaca acaatttctt tgctacatat agccgcggct acagaacagg
     2641 cggactcaca caattgtcgc tagatccatc gcagccccca ttatatcctt ataaacctga
     2701 atacagcgat aacattgaag c
//
LOCUS       DASQJI010000828        23357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2438355,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000828 DASQJI010000000
VERSION     DASQJI010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 23357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23357
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2438355"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(493..2835)
                     /locus_tag="VEV83_21610"
     CDS             complement(493..2835)
                     /locus_tag="VEV83_21610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47795.1"
                     /translation="MFWKKLNILLFLFFASGILCYDYGQSQTVNAQEFSGLNNQPLRE
                     KIFAHTDKDFYLAGEILWFKLYDVSGDSLKPIDVSNVAYVEILNANQKPVLQATVALE
                     NGRGNGSFYLPSSITSGNYIFRVYTNWMKNFSADKYFQKDITIVNTLTKLAAPAKNDS
                     NSYEVGFFPEGGDLVENIESKVGVKVTDHYGHGINCSGNIVDGNNRTIASFSTFKFGM
                     GSFYFTPQNGQTYKAIIQADDSSFVRALPPVKAKGYVMHIAGSGEDNITVAVRSNVSE
                     QAPVYLVAYSNDGVHAAFMQPTTAGGDASFIMGKKQLPPGITHLVLFNSTKQPVCERL
                     VFLRPQALQLQFAADKNVYEKRSAVTLGISASDSADLSLGVYLLDSLQGVDHNSILSY
                     LWLTSELNGKIDSADYYFSDVNHASDSALDNLLLTQGWSRFKEQSTQPLLRFAPEREG
                     HLIEGTVINKNSGAPTANIRVYLSVPGQHFRFATSVSNDSGHVFFDIKDFYGSGELIV
                     QTGKEDSAYRVEIADPFSNQTSGWLTTPLSLRDDALRQLSQRNVGMQVENAYTINQLN
                     RFGSPALDTNAFYGVPDSKYFLDDYVRFNTMEEVLREYVVGVDVRIRQGNYSLIASNY
                     VDHTFFEKGPLVLIDGVPIFDMNKLIAYNPLKIKKAEVVLKKYYINSLVADGIVSYST
                     YKGDLDGFQFDPGTIELSYDGLQLQREFYSPQYATTEQKEIRVPDYRNVLYWAPQITT
                     KQDREVSFYTSDVKGKYIAVIQGIGINGKAGYATTEFEVK"
     gene            complement(2846..3955)
                     /locus_tag="VEV83_21615"
     CDS             complement(2846..3955)
                     /locus_tag="VEV83_21615"
                     /inference="COORDINATES: protein motif:HMM:NF025420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 domain-containing protein"
                     /protein_id="HYK47796.1"
                     /translation="MKKELLYIVVLLAGCKEVYNPPVKTSNPNYLVVEGNIVVGDSTF
                     IHLSRTIGIHDTSIIQPERNATVSVESEDGESYNLQNMFNGNYFSPPLPIISTKNYRL
                     HIFTTDQKEYVSEYVPVKTTPPIDSVSWKFDSTHGVNIYVTTHDATNSTQYYRWKTVS
                     CWEHRASDSSELIYENGALRFRTPQEEIYRCWNIDTTGEIFLASTAALSSDIVFEKKL
                     AYIPYRSTQIRWVYSLLATQYALTKDAFEYWQNLKKNTEQIGSIFDPQPFAEFGNIHC
                     VTNPAEPVLGFISCCSTSKERIYIFWSQVHFPYDLPDCKKIVVSPSDIDEVFSGYMYL
                     PLRYGDFGSVFADYVDCLDCRLQGGTNVKPPYMPR"
     gene            complement(3972..5099)
                     /locus_tag="VEV83_21620"
     CDS             complement(3972..5099)
                     /locus_tag="VEV83_21620"
                     /inference="COORDINATES: protein motif:HMM:NF025420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 domain-containing protein"
                     /protein_id="HYK47797.1"
                     /translation="MKKLFYILIFIAGCKEAYNPSLKSLNVGYLVAEGNIVAGNDSTV
                     IHLSRTTSISDSSNITNPVTNAAVQIESEDGQNYQLQDEFDGSYFAPPLNISTNKKYR
                     VHIFTVDGKEYASDYVPVKISPAIDSVSWKLDSTNGVNIYVNSHDAQGQTLYYQWKYV
                     ETWQHRATYTSAYVFENGTIRLRTPDEYITNCWTVLPASSINISSTTQLASDIVYEKR
                     LVNIPYGSEKLSIVYSILVEQYALTKEAFQFWENLKKNTEQIGTIFDPQPFADFGNIH
                     CITNPAEPVIGFISASSIEEQRIYIFKQDLSSWPYRPPLCEVDTLKPGDDITSVADGG
                     FIPLYEITIPGTPETGLLITEPECADCRVHGGSTIKPPYMP"
     gene            complement(5110..6228)
                     /locus_tag="VEV83_21625"
     CDS             complement(5110..6228)
                     /locus_tag="VEV83_21625"
                     /inference="COORDINATES: protein motif:HMM:NF025420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 domain-containing protein"
                     /protein_id="HYK47798.1"
                     /translation="MIKRFFYIVVLFAGCKDIYNPPLKNPGYNYLVVEGNIVVGDSTF
                     IRLSRTIAVSDTSRRQLETNAAVTVESEDGESYNLQNRFDGVYYSPLLPITSTKEYRL
                     HIFTADGKEYASDYVPVKLTPPIDSISWKLDPGKGVTIYANTHDPTNTSQYYRWEYVE
                     TWEHRPKYLSELIWDRTVQYLRGRTPEEQIYRCWNTDTSGEILLASTTGLAADVVHEK
                     PLIQIPYASEKIDKVYSILVKQYTLTKGGYEFWTNLKNNTEQLGGIFDPQPFADYGNI
                     HCISNLAEPVLGYITACSTAEQRIYVYWTDVTWPYSFPTCGDTTVTPDHVAEIFSGFD
                     YLPLHYVLSPPGGVFGVLNECADCRLHGGTTVKPPYMP"
     gene            complement(6244..7368)
                     /locus_tag="VEV83_21630"
     CDS             complement(6244..7368)
                     /locus_tag="VEV83_21630"
                     /inference="COORDINATES: protein motif:HMM:NF025420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 domain-containing protein"
                     /protein_id="HYK47799.1"
                     /translation="MKRIFYIVILLAGCKEVYNPTLDNHNLNYLVVEGNIFPGDSTYI
                     RLSRSVPVNDSSVVYPETYATVSVESEDGSETYTLEDQLNGFYFSPFLPLNSPKQYRL
                     HIFAADGKEYASDYVPVKVTPPIDSISWKLDASGGVTIYANSHDASNTTQYYRWEYVE
                     TWEHNPKYFSQLVYDASVGGVRQRRPDEQIYRCWNTNTSSDILLASTVGLSGDVVHEK
                     PLIAIPYGSEKIDNVYSILVTQYALTKGAYEFWNNLKKNTEQLGSIFDPQPFADYGNI
                     HCISNSSEPVLGYVTACTVVQQRIFIHWTDVQWPYSYPSCNDTLVTGSHISQLFSGTE
                     YLPVQYDPSYPPGTAVDGALKDCVDCRLHGGSTVKPPYMP"
     gene            complement(7368..10124)
                     /locus_tag="VEV83_21635"
     CDS             complement(7368..10124)
                     /locus_tag="VEV83_21635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK47800.1"
                     /translation="MKKVLLFILCATAIKASSQTLFNIDADSMRFETFTRLIESNSNY
                     FFYYDTAQTNKLLVTIHAKNQSLEEILQKVLVNADLHFAIDDDNHVFITGGFAIQTEL
                     PPDFLNKQQARSDTGRAPQIELTGNPAVKQKTKIALETKLFEIGDKSVENVPGRATIS
                     GYIRDAKSGEPVIGASILNLEQHTGVVTDQYGYYSLTLPKGRHVLKITSIGMTDTRRQ
                     VAVYSNGSLNIEMDEFIPTLKDVTVSADKTVNVRSTLMGTQQLNIKTIKQIPSVFGEA
                     DVLRAVLTLPGVTSVGESSTGFNVRGGAADQNLILFNDATVYNPAHFFGFFSAFNPDI
                     IKTAELYKSSIPEKYGGRLSSVLDVTAREGNKKDFHGSGGVGPITARVSFEGPIDSNR
                     TSFILSGRTTYSDWLLRSLQNEAYANSSAAFVDANLLISHEINSNNNLYLNAYISGDK
                     FRLNSDTLYEYSNRNANVKWKHLFTNRFSGVFTGGLDHYQFAISSTVNPVNAFKFDFD
                     LDQVYGRADFDYALNTKHDFDFGISTVHYKLQPGNLEPNSDKSLVIPSTVEKEQAIET
                     AIYAGDHINVSQKFSLNAGLRFSMFNYMGPHTTYTYPPGQPRQVDNVTDSTTYGNGDV
                     IKTYMVPEIRLTGRYTLTDNSSFKFSYNTQSQYIHTLSNTTAISPTDIFKLSDQNIKP
                     QQGDQFSVGYYHNFKSNTIETSVEVYYRNIRNYLDYKSGATLILNHHLETDVLNAKGK
                     AYGAEFFIKKTAGKLNGWMSYTYSRTWLKTDDPLAERPVNDGDWYPADYDKPNVVNFI
                     GNYRINHRFSISLNVVYSTGRPITLPIAEYYYGNSYRVLYSNRNEYRIPDYFRSDFSM
                     NIDGNHKVHQRIHNSWTIGVYNFTARKNAYSVFFQAQNGHIQGYKLSIFGTAIPFITY
                     NFRF"
     gene            complement(10121..10843)
                     /locus_tag="VEV83_21640"
     CDS             complement(10121..10843)
                     /locus_tag="VEV83_21640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47801.1"
                     /translation="MEKYKKLICPLFFVLICTTSSAQGPFDSSLQQAVSVYNTVAGVN
                     SHLYNGTAYTDYDHRIKGDPFFASTYFADGSIIYDGIFYAHVQMFYDLLHDDVVIKNY
                     NGLPLVLVKDKISSFNFAGARFVRLVADSAEAGSKINGFFQVLFDRDIKLFAKRKKEV
                     IEKINLQFSETYFNQSNAYFILNNGIFYPVSDKRSVLYAMKDKRSQVNKFLHDNKIKF
                     KTNTEADLVRACSYYASLTNSK"
     gene            complement(10985..12028)
                     /locus_tag="VEV83_21645"
     CDS             complement(10985..12028)
                     /locus_tag="VEV83_21645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK47802.1"
                     /translation="MTVKILVVDDEADLEMLIKQKFRQKIRERQYEFVFAGNGNQALD
                     KLKQQVDVEIVLSDINMPEMDGLTLLSRLSEVSPIIKAVIVSAYGDMDNIRTAMNRGA
                     FDFITKPVNFEDLQLTIEKTIKHVNQTKETLRAIKENNILRMYVDENVLKFMGSREYE
                     TALMANETIEATIVFIDICSFTTISENEPADTVVTLLNKYFEVMVKEIIAQGGYIDKF
                     IGDAVLAIFRGDYHLDRAIEASLKVREQIEQLPKESHHSVFSPKVSIGINSGDVISGN
                     IGSANLRRLDYTVIGDVVNVAQRLQSAAKEGQILITETCYEKVKEYFECLPMGDMKLK
                     NKREPVATYEVIK"
     gene            complement(12025..12399)
                     /locus_tag="VEV83_21650"
     CDS             complement(12025..12399)
                     /locus_tag="VEV83_21650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYK47803.1"
                     /translation="MKILVVDDEKDIQILFEQRFRKEIRTGEMEFAFAFSGEDALNYL
                     SDHDHEAVLILSDINMPGMSGLELLRRIKEKHSEPPPVVMMITAYGDSENYNAAMRLH
                     ADDFLTKPLEFNLLKEKLKSLQ"
     gene            complement(12466..13857)
                     /locus_tag="VEV83_21655"
     CDS             complement(12466..13857)
                     /locus_tag="VEV83_21655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47804.1"
                     /translation="MTAEPFIALVLIWQLRRINKRSFVRPEWDKPLRNAMFTVLGIMI
                     FQAVLPDILTTWLWHIAMVMFIIAIFKMEELQAIRNLAIAFLPLMAVALLKDIVGLLP
                     DSIEHKFDSYLNFAFPASAVWMIVMLIIFNKQRKALEKEHRKTEDEEQQKKIAEARKA
                     ELEVLVAERTSEILQQKNELEKTIEELRNTQSQLIQSEKMASLGALTAGIAHEIQNPL
                     NFVNNFSEVNTELIEELKAEHLKPRSDRSDQFEQQLLNDISENEHKIIHHGKRADAIV
                     KGMLLHSRISTGQKEPTDINAVVDEYLRLSYHGLRAKDKTFNAKYEANLDETIGEIKI
                     VPQDIGRVLLNLFNNAFYAVTEKKKQNIEGYDPTVTVTTKRIDTHIAANMGQREGGVL
                     VTVADNGNGIPDDVVQKIFQPFFTTKPPGEGTGLGLSLSYDIVRAHGGEIRVETSPGE
                     GSKFTIALPRDQT"
     gene            complement(14003..23320)
                     /locus_tag="VEV83_21660"
     CDS             complement(14003..23320)
                     /locus_tag="VEV83_21660"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYK47805.1"
                     /translation="MDDTQGELQSPDVELKEQLASKTIELERTQHELHIEAALENVRL
                     AAMRMRKPDELAGIATLIFKELGSLGFTDLRNSEIIINNEARQTIVSYYSDYGVTGNI
                     EIDYTTNGIVKKWAEQLRTASDAFAQVAIAENEMEAWRKYRESLGYLPDAKLNEAINV
                     YYYSYSIGLGALSISSFKPVSADQIIILKRFRNVFELCYQRYNDIALAEAQAKDAQIE
                     TALEKVRSRSMAMHNSSELHDVIKVVTEQLLTIGMRFEYALFCKVDEAGDWHIYVSTA
                     QQAYPAKIHFPYFDNAVFNRFNERAKTDVDFFTDLSSAEEKNIFFRRFFEITEARIIP
                     EERQKYILDNRGMARSFFRLTNIWFAMGKYDDHLFSDEENKIFKRFATVFDQSYTRFL
                     DLLRAEAQTREAEIELGLERVRAKTMAMQHQDDLLEVTDLFADQLIGLGVDLDIVNFS
                     NGLSYGDWDLWITGPKNETERVTYRVTVPWFDHPFFQKSKISLDNFKKGIDLSVEVFT
                     KDEKDRFLRHIFQRSVLNIYPDDAKEYLYSKPGFVWTTVVLKDTWVAICKYDTRPFTD
                     EQNAIIKRFANAFGQAYTRFLDLQKAEAQAREAQIQLSLERVRARAMAMHNTDELNEV
                     LSVLFDQFDALGIHPLTASLALIDLEKNSFTFRMTGKEGKRNIGAHEFRLDAVEQWQQ
                     AAERWKNSGPDAINCFEFPKEIMPQLWELFSEVFESMPEDARPTLADVPNGIYTTEGY
                     CKFGYLGFSHTRKATEEEKTIVLRFAREFGTVYQRFLDLQKAEAQAREAQIEAGLERV
                     RYSAMAMQSSEEVSAATAVVFHEISALGIETMRCGITILHSDGTADVWVATASPQGNQ
                     MSGIGSIPLSLHPLWTGMYNAWLEKKDDFNYALKGDDVKNYYKIVAHLTTYSATYTAN
                     TEWPAHDHYFYGSCFEQGALFTFSLQPHDEEKRKILRRFTSVFSFTFRRYLDLKHAEA
                     QAREAQIQLGLERVRARTMAMHNSAEINAITGTLFNELIRLDFVLTRCLILIIDPQTR
                     SSRWFMANPEEPLEPRDFFVPYHEHPGYLSFLKGWEDRASKWIYENEGALKKDWDEFF
                     FSETEMSLLPDSVKAGMRANKRAFVNSSFGNFGALVVGSLEALGDNQFEILVRFTKVF
                     QQSYTRFLDLQRSEAQAREAQIEAALERVRSSSLAMHHSDQLREVVKVVFEKLKELDF
                     AIDGAAFIGTHIPHSRDMNIWIGDDHGDYPGCFRTAFYETPIVTDIWNAYNAALDFYS
                     KTYSFEEKNTWFKFAFEHTDYRSLPEELKNWILGQQFLTQCFALARHSIIGIHFHHEK
                     TLSDKEIDILKRFSKVFEQGYIRFLDLQKAEAQAREAEIELALERVRARTMSMQVSGE
                     LEQVMHTVFERLKELNIDFYTAIIIVFQEGSKDVLWWLENRQHQHFGKILVPYTDIAY
                     LKDLANTRESGNDFFTKHYPFEEKNDLFRHLFNNTGLKHIPEEQKTVLLEAPFATMSV
                     GLAKNTAIHITSYSRKSFDERENDIVKRFAKVFDHGYTRFLDLQTAEAQARESQIQLA
                     LERVRARTMAMQRSDELSETAHLLFQQFTQLGVSAIQITIGIMKEAEGVMEFRVTDWG
                     GTGSKVNAGFEVSIDEPTVINKIYKAWKRKDTSIVIDLTSGELEAWLQYRNKVSGVEV
                     KSTETAGRRVISVALFSKGMLAFSTALPPSPETVSILEKFASVFDLTYTRFLDLQKAE
                     ASAREAQIEAALEKVRSSTMAMHKSEDLSKTAAVLFAQLSVLGNTPDRISIGVLDESA
                     GVADMWLTDQSGNQINVPYRVSLEEPTTVRKLFEGWKAGLKSTVVDLTGKQLKAWLKY
                     VRQIGLTINDEYFKNRRVHNIAFFSHGWLNISSLEPLPAEMMNVLERFAAVYSLTYRR
                     FIDLQKAEAQARESQIQLALERVRARTMAMHKSEELAETALLLDQQLNHLGVVPIRSM
                     IAIVNEQEQIFDWWMTQPGGKEIEKQVSTKISGHPALGKMFACWKEQKGSMILNFHEK
                     DLSGWLKYVREEMKLTVNEKLVEGRTTDTIIAPFKYGIIAFVVPAPNSDETVSVIERC
                     AGVFNLTYGRFLDLKKAESQAREAQIEASLERVRSKTMAMHNSSDVGETVAATFAEFV
                     HLNISTNRCGILIFGDDNIAEVWTARAMRGGPAKLITGKLDLDAHKMLRSVYDAWKAK
                     ESFHQYELANDDLKDYYHAINNEKYYPTKFDLNALPSKEFHTDFFFPDGAVFSFTNEP
                     IPGEHKKIIQRFASVFGQTYRRYLDLRTAEAQAREAQIEASLERVRSKTMAMHSSQDV
                     ADTVAAMFDELTRLNVETIRCGIGIMHEPNELEVWTAKPSANGKADLVVGNLDTRLHP
                     LLEEGLQGWKSKKKHFSYELKGDDLEKYFSAINNYPGYPVKYDIKLLPPRVVHNDFYF
                     SEGTLFAFSVQHLPHEASEILKRFASVFGQTYRRYLDLQRAEQNAREATIEAALEKVR
                     GKAMAMHNSNDLSATASMVFTELRKLGINPIRCGVGLLTKESFKAQLYSATSGADGDS
                     LSLVGWVMLAGHPVLQNIYHAWMKQEDYFPELTGEQLRSYYENLSAGLTLPEVPHFKK
                     QEREHGHFFSFSVGCLYAWSALRYNDDEIRILKRFATIIDLTFRRYIELQKSEANARE
                     AVKQAALDRIRADIASMRTVGDLDRITPLIWNELTILGLPFIRCGVFIMDDTQQMIHT
                     FLSTPDGKAIAAFHMPYSMPGKIIYVISHWRDRQHYVDHWETSDFAGLADLLVQQRSF
                     ASAEQYIKTLPPNGFYLHFLPFLQGMLYVGNTTRLSEEQIALIQSVADAFSTAYARYE
                     DFNKLEAAKQQVDKTLFNLKQAQQQLVQSEKMASLGELTAGIAHEIQNPLNFVNNFSE
                     VTNELIDEMKAALATGNLKPVTEIADDIKHNLEKIVHHGQRADAIVKGMLQHSRISGG
                     QKELIDINVLSDEYLRLAFHGLRAKDKSFNAKFETDFDHSIGKINIIPQDIGRVLLNL
                     INNAFYAVTEKRQENRAGFEPTIAVTTKKSGDKVLISVADNGNGIPQNIVDKIFQPFF
                     TTKPTGQGTGLGLSLSYDIVKAHGGDIKVETKEGEGSAFIIELPL"
BASE COUNT         5920 a         5486 c         5065 g         6886 t
ORIGIN      
        1 ggtcagcttt tactcttact ccaacgatag agatacaaat gcggtcgagg tatgtgagcg
       61 tcgtgagcga acacaatatg gcaagaatgc gataacgata tggaatggcc ttgagcattt
      121 tcattactgc aatcgcggtt gaaaaaatat gagttttctt cttagggaaa gatagtcaac
      181 atttcctctt actctaatgt agtaactgca gtatttcagt tagctgactt aactggcgca
      241 gatggtttcc cggacatcac aacaaatgca ggtcgtcatg cccgaacgaa atcatctatt
      301 caatgcaaaa tgcccatgat cgggcatcta ttatcaatcg gtcccacagg tcgcaccgtt
      361 cccttaagaa ggaaattccg cgttcgcgcg cttttgcgcg attgacgttc cggaagagag
      421 tgcccggtcg ggcccggaat aactatccgc aatgagcgtt ttgttgtcgc aagagatccg
      481 gcgtgcagaa acttacttta cctcaaactc tgttgtggcg taaccagctt tgccgttaat
      541 gccgatgccc tgtatgacgg cgatatattt gcccttcaca tccgaagtat aaaaagatac
      601 ttctctgtcc tgcttcgttg ttatttgcgg tgcccagtat aagacgttcc gataatcagg
      661 aacgcggatt tccttttgtt cagttgttgc atattgcgga gaataaaact cccgctgaag
      721 ttgcagcccg tcatatgaaa gttcgatagt gccgggatca aactggaaac catcaaggtc
      781 gcccttgtaa gtgctgtaac ttacaattcc atcggcaaca agtgaattga tataatattt
      841 tttcaaaacc acttccgctt tttttatttt cagcgggtta tatgcgatca atttattcat
      901 gtcgaatatt ggaactccgt cgatcaaaac cagtggccct ttttcaaaaa aagtgtgatc
      961 aacataattt gacgcgataa gtgaatagtt gccctggcgt atgcgcacgt caacaccgac
     1021 aacatattcc ctcaatacct cttccatagt gttgaatcgc acgtaatcat cgagaaaata
     1081 tttactgtcc ggaactccat agaaagcatt tgtatcaagt gccggggaac cgaacctgtt
     1141 taactggttt atggtgtaag cattctccac ctgcattccc acgttccgtt gcgacaattg
     1201 ccgcagcgcg tcatcacgca ggcttaatgg cgtcgtcagc cagccactcg tttggtttga
     1261 aaacgggtca gcaatttcaa cgcgatacgc gctatcttct tttcccgttt gcactattaa
     1321 ttcacccgat ccgtaaaagt ctttaatgtc aaaaaaaaca tgcccgctgt cgttgctcac
     1381 ggaagttgca aagcggaaat gctgaccagg aactgataag tagacgcgga tgtttgctgt
     1441 aggtgcgccg gaatttttat tgataacggt cccttcgatg aggtgacctt cgcgctcagg
     1501 agcaaagcgc aataaaggct gagtgctttg ctctttgaat ctcgaccagc cttgcgttag
     1561 caacaggtta tcaagggcag aatccgacgc atgattcacg tcgctgaaat aataatccgc
     1621 ggaatcgatc ttaccgttta gttcagacgt taaccataga taacttaaaa tagaattgtg
     1681 gtcgacgcct tgtaacgaat cgaggagata aacacccagc gacaaatctg cactatcgct
     1741 ggcgctgatg cccagggtta ctgcgctgcg tttctcgtat acatttttat cggcagcaaa
     1801 ctgtaactgc aatgcttgtg gacgcaaaaa taccaggcgc tcgcacaccg gctgtttggt
     1861 gctattaaaa agcacaagat gcgtaatgcc cggcggtaac tgcttcttgc ccatgatgaa
     1921 agacgcatcg cctcccgcgg tcgtcggttg cataaaagct gcatgaaccc catcatttga
     1981 atacgcgaca agataaaccg gtgcctgttc agacacattc gatcttactg caacggttat
     2041 gttgtcttct ccagagccgg caatatgcat tacataacct ttcgccttca ccggtggcaa
     2101 tgctcgaacg aaagagctat catccgcctg tataatagct ttgtaagttt gcccgttttg
     2161 cggagtaaaa taaaaagaac ccatcccaaa tttgaaggtt gaaaaactcg cgatagttct
     2221 gttgttacca tccacaatat ttccgctgca attgatacca tgaccataat ggtctgtcac
     2281 tttcacacca actttgcttt caatattttc aacaagatct cctccttcgg gaaaaaagcc
     2341 aacttcataa ctgttcgaat catttttcgc cggcgccgca agcttggtca acgtattgac
     2401 gatcgtgata tctttttgaa aatacttgtc ggcgctaaaa tttttcatcc agtttgtata
     2461 cacacggaaa atgtaattac cggatgtgat cgaagagggc aagtagaatg agccattgcc
     2521 tctgccgttt tctaaagcaa ctgttgcctg caataccggt ttttggtttg catttaatat
     2581 ctccacataa gccacgttac ttacatcaat tggcttcaaa gaatcgcctg aaacatcgta
     2641 caatttaaac cagagtattt cgcctgcgag ataaaaatct ttgtctgtgt gggcaaagat
     2701 cttttcacga agtggttggt tgttcagacc ggagaactct tgcgcattga cggtttgcga
     2761 ttggccataa tcgtaacaca aaataccgct cgcaaaaaat agaaacaaaa ggatatttaa
     2821 ttttttccaa aacatgcttt atattttatc gtggcatata aggtggctta acgtttgttc
     2881 ctccctgcag ccggcaatca aggcaatcca catagtcagc gaacacactt ccaaagtcac
     2941 catatcgcaa tggcaaatac atatagccgg aaaagacctc atctatgtcc gacggggaaa
     3001 ctactatctt tttgcaatca ggtaggtcgt agggaaaatg aacctgcgac cagaatatat
     3061 aaatcctctc ttttgacgtt gaacagcagc ttatgaatcc aagcaccggt tcggcgggat
     3121 ttgttacgca atgtatgttg ccaaattcag caaaaggttg cggatcgaaa atagatccta
     3181 tctgctcggt attttttttc aggttctgcc aatattcaaa cgcgtctttc gttaacgcgt
     3241 attgcgtagc gagtaaacta taaacccacc tgatctgcgt tgagcgatag ggtatgtatg
     3301 caagtttttt ttcgaataca atgtcagaag aaagtgcggc ggtcgaagcc agaaaaattt
     3361 cacccgtggt atcgatgttc cagcaccgat agatctcttc ctgcggagtg cgaaatcgaa
     3421 gcgctccgtt ttcatagatc agctccgacg aatctgatgc ccgatgctcc cagcatgaaa
     3481 cagttttcca gcgataatac tgagtgctgt tcgttgcgtc atgcgtagtc acataaatat
     3541 taactccgtg tgtactatcg aatttccatg agacactgtc gatgggcggt gtggtcttca
     3601 ccggcacata ctcagaaaca tattcctttt ggtctgtcgt aaaaatatgc aagcgatagt
     3661 tctttgtgga aatgatcggt aatggcggag aaaaatagtt gccgttgaac atgttctgca
     3721 aattataact ttcgccatcc tcgctttcta cgctaacggt tgcgtttctt tcaggttgaa
     3781 tgatgctggt atcgtgtatt ccgatcgtac gcgacaagtg aataaaagtg gaatcgccca
     3841 caacaatatt tccttcaacc actaaataat ttgggtttga agtttttacc ggcggattgt
     3901 aaacttcttt acaacccgca agcaaaacga cgatataaag taattccttt ttcaaagttc
     3961 catttaattt attacggcat gtaagggggt ttaatcgtag agcctccgtg cacccggcaa
     4021 tcagcacatt ccggctctgt gatcagtaaa ccggtctcag gcgttccggg tatagttatt
     4081 tcatacaggg ggataaaacc cccgtctgcc accgatgtaa tatcatcacc gggctttaaa
     4141 gtatctactt cgcataatgg cggccggtac ggccaggaag ataaatcttg tttaaaaata
     4201 tagatgcgct gctcttctat ggaacttgca ctaatgaatc cgattacagg ttcagcagga
     4261 tttgtaatgc aatgaatatt cccaaaatcc gcaaatggct gcggatcgaa aatcgttccg
     4321 atctgttcag tatttttctt gagattctcc caaaattgaa atgcttcttt cgtcagggcg
     4381 tattgttcta caagtatact gtaaacaata cttagtttct ccgagccgta tggaatgttc
     4441 accagccgtt tttcatatac tatatcggac gcaagctggg tggtagacga aatatttatt
     4501 gaagaagcag gaagaactgt ccaacaattg gtgatgtatt catctggcgt tcgaagccgg
     4561 atggttccgt tttcgaatac gtaagctgat gtgtatgtag cccgatgttg ccaggtctcg
     4621 acgtacttcc actggtaata taaagtttgg ccttgcgcat cgtggctatt aacgtaaata
     4681 tttacaccgt tcgtgctgtc aagcttccag gaaacactat cgatggctgg cgagattttt
     4741 acaggcacat agtctgatgc atattcctta ccgtcgacgg taaaaatatg tactctatat
     4801 tttttgttag tgctgatgtt taaaggcggt gcgaagtagg aaccgtcgaa ttcgtcttgc
     4861 agctggtaat tctgaccatc ttcactctct atttgtactg ctgcattcgt tacggggttg
     4921 gtgatgttac tgctgtcact tatggatgtg gttctcgata aatgaattac agttgagtca
     4981 ttacctgcta caatatttcc ttccgcgaca agataaccaa cgttcaaact ttttaaagac
     5041 ggattatatg cttctttaca cccggcaata aagatcagta tgtaaaaaag ctttttcatg
     5101 tgacaattgt taaggcatat aagggggttt aactgttgtg ccgccatgca accggcaatc
     5161 tgcacattcg ttcaaaacgc caaagacccc acccggtggc gagagaacat agtgaagggg
     5221 cagatagtca aatcctgaaa aaatctccgc aacatggtcc ggcgttacgg tcgtatctcc
     5281 acaagtcgga aaagaataag gccacgtcac atcagtccag tacacatata tcctttgttc
     5341 agcggttgag cacgcagtaa tgtatcccaa cacaggttca gccaggttgc ttatgcaatg
     5401 tatgtttccg taatctgcaa aaggctgcgg gtcaaaaatc cctcccagtt gctccgtgtt
     5461 atttttcagg ttggtccaaa attcatatcc tccttttgtg agcgtgtatt gtttaacaag
     5521 tatgctgtac accttgtcaa ttttttcgga ggcatagggt atctgtataa gcggtttctc
     5581 atgaaccaca tctgcagcaa gaccggtggt tgaagcaaga agaatttcgc ccgaagtatc
     5641 ggtattccag caccggtaga tctgttcttc cggagttctg cccctcaaat actgaacggt
     5701 ccggtcccaa attaattccg ataaatattt cggtcgatgc tcccaggtct ccacatattc
     5761 ccaccgataa tattgtgatg tgtttgttgg atcatgcgtg tttgcataaa tggtgactcc
     5821 cttgccagga tcaagtttcc atgaaatgct gtcgatcggg ggagttagtt ttacgggcac
     5881 ataatcggat gcatactctt ttccgtccgc agtaaaaatg tgcagccggt attcttttgt
     5941 tgaagtgatg ggcagcaagg gagaatagta aacgccgtcg aaccggttct gcaagttata
     6001 tgactcgcca tcttcgcttt ctacagtaac ggccgcattc gtttccagct gccgccggct
     6061 tgtatcgctc acagcaattg tcctggacaa acggataaat gtagaatctc cgacaacgat
     6121 attgccctcc actaccaggt aattatagcc agggtttttt agcggtggat tatatatgtc
     6181 cttgcagcca gcaaacagaa caacgatata aaaaaatctt tttatcaaaa ttcattcatt
     6241 tgatcatggc atataagggg gcttaacagt acttcctcca tgcaacctgc agtcaacaca
     6301 atctttcaag gcgccatcca cagcagtacc gggaggatac gaaggatcat attgcacggg
     6361 taaatattct gtccctgaga aaagttggct gatatggctt ccggtaacaa gtgtatcgtt
     6421 gcaagacgga taagaataag gccattgcac gtccgtccaa tgtatgaaga tcctttgctg
     6481 aacaaccgtg caggcagtta cgtatcccaa taccggttca ctgctgttac tgatgcagtg
     6541 tatgttcccg taatcggcga aaggttgcgg atcgaaaata cttcccaatt gttcagtatt
     6601 ttttttcagg ttattccaaa actcatatgc gccttttgtt aatgcatact gcgttacaag
     6661 tatactgtac acgttgtcga tcttttctga tccatacggt atcgcgataa gtggtttttc
     6721 gtgaacaaca tctccggaaa ggccgacagt tgatgcgagc aaaatgtcgc tggacgtgtt
     6781 tgtattccag caacgataaa tttgttcgtc gggccgtcgt tgcctcacgc cgccaacgct
     6841 ggcgtcgtat acgagctggg aaaaatattt tggattgtgc tcccacgttt caacatactc
     6901 ccatcgatag tactgtgtag tgttgcttgc atcatgcgag tttgcataaa tagtcactcc
     6961 tccgctggcg tccagtttcc atgaaatgct atctattggt ggcgttactt ttacaggcac
     7021 ataatcggat gcatattctt ttccgtctgc tgcaaaaatg tgcagccgat attgcttagg
     7081 ggaattaagc ggtaaaaatg gagagaagta aaacccattg agctgatctt ccaaagtgta
     7141 tgtttcgctg ccatcttccg attccacgct tacggttgca tacgtttcag gataaacaac
     7201 gctcgagtca tttacgggta ccgatcttga caagcggata taagtagaat cgcccggaaa
     7261 aatgtttccc tcgaccacta aataattcag gttgtgattg tctaacgttg gattatacac
     7321 ttctttacaa ccggccaaca ggataacgat ataaaaaatt cgcttcatca aaacctgaaa
     7381 ttatacgtga taaaagggat tgctgttcca aagattgaca gcttgtatcc ctgtatatgg
     7441 ccgttttgcg cctggaaaaa aacggaatac gcatttttcc tcgcagtgaa attgtacacg
     7501 ccgatggtcc acgagttgtg aatgcgctgg tggaccttat gattaccgtc gatgttcatt
     7561 gaaaagtctg accggaaata atcgggtatc cggtattcat tcctgtttga gtaaagcaca
     7621 cggtaagaat ttccgtaata atattcggcg atcggcaacg tgatcggcct gcctgtgcta
     7681 tacacaacgt tcagagagat gctgaaccgg tggttgatcc tgtaattgcc gatgaaatta
     7741 acgacgttgg gcttgtcata atcagccgga taccaatccc catcatttac cgggcgctct
     7801 gcaagcgggt catctgtttt taaccacgta cgcgaatatg tgtagctcat ccagccattc
     7861 aatttgcctg cagttttttt gataaaaaat tctgcgccgt aggctttgcc ttttgcattt
     7921 aaaacatcag tttccaggtg atgatttaat atcagtgtcg cgccgctttt ataatcgaga
     7981 taattcctga tgttcctgta atacacttcc accgatgttt cgatcgtgtt tgatttgaag
     8041 ttgtgatagt aacccactga aaactggtca ccctgctgcg gcttaatatt ctgatcactt
     8101 aatttaaaaa tatccgtggg cgaaatagcc gtagtgttgg atagcgtgtg aatgtattgc
     8161 gattgcgtgt tgtaactgaa tttgaaagat gaattatcgg ttaacgtata gcggcctgtg
     8221 agtcttattt ctggcaccat gtaagttttt ataacgtcac cattaccgta tgttgtgctg
     8281 tctgtaacgt tgtctacctg tcttggctgg ccgggcggat acgtgtatgt tgtgtgcggc
     8341 cccatataat taaacatgga aaatctcaac ccggcattca aagaaaactt ttgagacacg
     8401 ttaatgtgat cgcccgcgta tatggcggtt tcaatggcct gctccttttc aactgtgctt
     8461 ggtatcacca aagacttgtc actgtttggt tccaggtttc cgggttgcaa tttgtaatgt
     8521 accgtactga taccgaaatc aaagtcgtgc tttgtgttaa gtgcatagtc aaagtcggcg
     8581 cggccataga cctggtcaag gtcaaaatca aatttgaatg cattcaccgg gtttactgtg
     8641 ctgctgatgg cgaactggta atgatcaagt ccgcccgtaa agaccccgga aaatctattt
     8701 gtgaagagat gcttccattt aacattcgca ttgcggttgc tgtattcgta caaggtatcg
     8761 ctattgagcc tgaacttatc tccgctgatg tacgcgttca ggtaaagatt attatttgaa
     8821 ttgatctcat gactgatcaa caggttcgcg tcaacgaatg cggcactgct gttggcgtaa
     8881 gcctcatttt gaagcgaacg caacagccaa tcggagtaag tggtccttcc gctaagtatg
     8941 aacgaagttc tgttgctgtc gatcggtcct tcaaaactta cgcgtgctgt gatcggtcca
     9001 acacctccgg aaccgtggaa gtctttttta tttccctctc tcgcagttac atcgagcacg
     9061 gatgaaagtc tgccaccata tttctcgggg atactgcttt tatacaattc cgcagttttg
     9121 ataatatcag gattgaaggc agaaaagaat ccaaagaaat gcgcggggtt ataaactgtt
     9181 gcatcgttga ataagataag attctgatcg gctgcaccgc ctcgtacatt aaatcctgtg
     9241 ctgctttctc caacggaagt aacacccggc aaagtgagca ccgcgcgcag tacatccgct
     9301 tcgccaaaaa cagacggaat ttgctttatt gtttttatgt tcaattgctg tgtgcccatc
     9361 aacgtgcttc ttacattgac agttttgtcg gcgctcacag ttacatcttt caatgtggga
     9421 atgaattcat ccatttcgat gttaaggctg ccatttgaat atacagccac ctgccgtcgc
     9481 gtatctgtca taccgatgct tgtgatcttc aacacgtgcc tgccttttgg cagcgtgagg
     9541 ctataatacc catactggtc ggtgacaacg cccgtatgtt gttccaggtt taagatactc
     9601 gcgccgatca cgggctcacc agatttggca tccctgatgt acccggaaat ggttgccctg
     9661 cccggaacat tttcaaccga cttgtcgccg atctcgaaca atttggtttc cagggcaatc
     9721 tttgttttct gtttcaccgc gggattaccg gtcaattcaa tttgcggagc cctgcccgta
     9781 tcgctcctcg cctgctgttt attaagaaaa tccggcggca gttcggtttg tatcgcaaac
     9841 ccgccggtga taaaaacatg gttgtcgtca tcgatagcaa aatgcaggtc agcgtttact
     9901 aaaacttttt gcaggatctc ttccagggac tggttttttg catgaatagt aacgagaagt
     9961 ttatttgttt gagccgtatc gtaataaaaa aagtagttac tgtttgattc tatcaaacgc
    10021 gtaaatgttt cgaaccgcat gctgtccgca tcgatattaa aaagcgtttg tgatgacgct
    10081 tttatcgcag tggcgcaaag aatgaacagt aaaacttttt tcatttgcta ttcgttaagc
    10141 ttgcataata actgcatgcc cttaccaggt cggcttctgt gtttgtctta aattttattt
    10201 tgttgtcgtg cagaaattta tttacctggc tgcgtttatc cttcattgca tacagaaccg
    10261 acctcttatc gctcacaggg taaaaaatgc cgttgttcaa aatgaaatac gcattgcttt
    10321 ggttgaaata agtttcggag aactgcagat tgatcttctc aatcacctct ttttttcgct
    10381 ttgcaaaaag tttgatatct cggtcgaaca acacttgaaa aaacccattt atcttactgc
    10441 cggcctcagc gctgtcggca acaagcctta caaaccgggc gccagcaaaa ttgaatgaac
    10501 tgatcttgtc tttaacaagc accaatggca ggccgttata atttttgatc accacatcgt
    10561 catgcaggag gtcataaaac atttgcacgt gagcgtagaa tatgccgtcg taaattattg
    10621 aaccgtcagc gaaatatgtc gaggcaaaaa aaggatcgcc ttttatccga tggtcatagt
    10681 cagtgtatgc ggttccgttg tacaggtgcg agttcacgcc tgcaacagtg ttgtaaaccg
    10741 agaccgcttg ttgcaatgat gagtcaaagg gcccctgcgc acttgaagtt gtacaaataa
    10801 ggacaaagaa taaagggcaa ataagttttt tatatttttc catttccatt agcggagtgc
    10861 ctgccgtctt tcatttttaa tcagcaataa atatcaatcg gtttgcctga aaaattgtgc
    10921 gggagatcgt tgcaaaagaa caggcggtat atactcacac ggccatcgtc tgaaaaaaca
    10981 gcaatcattt gatcacctcg taagtagcta ctggttcccg tttatttttt agtttcatgt
    11041 cccccatagg aagacactca aaatactctt ttactttttc gtagcatgtt tcagtgatca
    11101 gtatctggcc ttcttttgcc gccgactgca gccgctgggc cacgttcacc acatcgccga
    11161 tcacagtata atccagtctc ctcaagttcg cggagccgat gtttccgctg atcacgtcgc
    11221 cgctattgat gccgatcgag actttgggag agaataccga atgatgcgat tctttgggca
    11281 gctgctcgat ctgttcgcgc accttaaggc ttgcttctat agcccggtcg agatgataat
    11341 cgccgcgaaa aattgcaagt accgcgtcgc cgataaactt gtcgatgtaa ccaccttgtg
    11401 cgattatttc cttcaccatg acctcaaaat atttattcag cagggtgacc accgtgtcgg
    11461 caggttcgtt ctcactgatg gtggtaaaac tgcaaatgtc aataaagact atcgttgctt
    11521 caatggtctc attagccatg agcgccgttt catattcccg gctgcccata aacttcaaaa
    11581 cattttcatc aacgtacatg cgcaggatgt tattctcttt tattgccctc agtgtttctt
    11641 ttgtttgatt tacgtgcttt atcgtttttt caatcgtgag ctggaggtcc tcgaaattca
    11701 ccggcttggt tataaaatca aaagcaccgc gattcatggc cgtgcgaata ttgtccatat
    11761 ccccataagc ggacacaatc accgctttaa tgatcgggct tacctcgctt agtctggaga
    11821 gtaacgtaag tccgtccatt tcgggcatat tgatatcgct aagcacgatc tcaacatcca
    11881 cctgctgctt cagtttatca agagcctggt ttccattccc ggcaaaaaca aattcatact
    11941 ggcgttcgcg aatcttctgc ctgaactttt gcttgatcaa catctccagg tcggcttcat
    12001 catctaccac aagaattttt actgtcattg aagggatttt agtttttctt tcagcaaatt
    12061 aaattcaagc ggcttggtaa gaaaatcatc tgcatgtaaa cgcatcgccg cattataatt
    12121 ctcactatca ccatacgcag tgatcatcat tactaccggt ggcggctcgc tgtgcttctc
    12181 cttgatgcgc ctcaacaact cgagcccgct catccccggc atattaatat ctgacaggat
    12241 caacacggcc tcatggtcgt gatcagacag gtaattgagt gcgtcttcgc ccgaaaaagc
    12301 gaaggcgaac tccatttcac cagttcttat ctctttcctg aaccgctgtt caaagagaat
    12361 ctgtatgtct ttttcgtcgt caactactaa aattttcatc gatgaattta gcattttaat
    12421 cctggttttg ataattggta ggttgcaaac ataagtatag ctaaattaag tttgatcgcg
    12481 cggcagtgca atagtgaact tcgatccttc acccggactg gtttccaccc gtatctcgcc
    12541 gccgtgtgct ctcacgatat cataactcaa actcaacccc agtcccgttc cttcccccgg
    12601 tggtttggtt gtaaagaaag gctgaaaaat tttctgcacc acatcatccg gtatgccgtt
    12661 cccattgtcg gcaactgtca caagaacgcc gccttctctt tggcccatgt ttgcagcaat
    12721 atgtgtgtcg atccgctttg tggtcactgt taccgttggg tcgtatccct caatattttg
    12781 ttttttcttt tcggtaacgg cgtaaaacgc attgttgaat aaattgagaa gtacccgacc
    12841 gatatcctgc ggcacaattt ttatttcacc gatcgtttca tcgaggtttg cttcatattt
    12901 tgcattgaac gttttgtctt ttgcccgaag gccgtgatac gaaaggcgca aatattcgtc
    12961 gacgacagcg ttaatatcgg taggctcttt ctggccggta ctgatccttg agtgcagcaa
    13021 catccccttt acgatcgcat ccgcgcgctt gccatggtga atgatcttat gctcgttctc
    13081 cgaaatatca tttaacaact gttgctcaaa ttgatcgctt ctgtctgatc tcggcttcaa
    13141 gtgttccgct ttcagttctt ctattagttc agtatttact tcggaaaaat tattaacgaa
    13201 gttcaatgga ttctggatct cgtgcgcgat acccgcagtg agcgctccca gtgaagccat
    13261 tttctctgac tggatgagtt gtgattgcgt gttgcgcagt tcttcaatgg ttttctccaa
    13321 ttcgtttttt tgctgcagga tctcggaggt tcgttcagcg accagcactt caagctcggc
    13381 tttacgcgcc tcagcgatct ttttctgttg ctcttcatcc tccgttttcc tgtgctcttt
    13441 ttcaagcgcc tttctttgct tgttgaaaat gatcagcatg acgatcatcc aaaccgccga
    13501 ggcaggaaaa gcgaaattga ggtaactgtc aaacttgtgc tctatactgt cgggtaacag
    13561 gccgacgata tcttttaaca aagcaacggc catcaaaggg aggaaggcga tcgccaggtt
    13621 cctgatggcc tgcaattctt ccattttaaa tatggcgatg atgaacatca ccatagcgat
    13681 atgccataac caggtagtca ggatgtcggg cagtaccgcc tggaagatca tgatgcctaa
    13741 aacggtaaac atggcattcc tcaatggctt gtcccattcc ggtcgaacaa acgacctttt
    13801 atttattctt cgaagctgcc agataagtac taaggcgatg aacggttcgg cggtcattga
    13861 atgaataata aattaatctt taaaagtaaa gttatctgcg catatggctc gcgcgagacg
    13921 tacaattagt tataacgcca ggttgtataa gcaaatgttg atgatatcat cacgtgtcaa
    13981 acagttttgt agtggcaggc acctacaggg gcaattcaat aataaatgcg ctcccttcac
    14041 cctctttcgt ctccaccttt atatctccac cgtgcgcttt tacaatgtca tagcttaaac
    14101 tcaaacccaa acctgttccc tgccccgttg gttttgtagt aaagaaaggc tggaagatct
    14161 tatcaacaat attttgagga ataccattgc cgttatccgc aactgagatc agcactttgt
    14221 caccgctttt tttggtggtc acagctatcg ttggttcaaa gcccgcccgg ttttcttgtc
    14281 gtttttccgt gactgcataa aatgcattgt tgatcaaatt aaggagcacc cggccgatat
    14341 cctgcggaat gatatttatc ttcccgatac tgtgatcgaa atccgtttca aacttggcat
    14401 tgaaagattt gtccttggct cgcaggccat gaaaagctag tctcaaatat tcatccgaaa
    14461 gcacattaat atcgatcaat tccttctggc caccgctgat gcgggagtgc tgcaacattc
    14521 cttttacgat agcgtcggca cgttgaccat gatgaacaat tttttccagg ttgtgtttga
    14581 tgtcatcagc gatttccgtt acaggtttca ggttgccggt tgcgagcgct gccttcatct
    14641 catcgatcaa ctcgttggtt acctctgaaa agttgttcac aaaattcaaa gggttctgta
    14701 tctcatgcgc gatacccgct gtgagctcac cgagagaagc cattttttct gattgcacca
    14761 gttgctgttg cgcctgcttt agattgaaca gtgttttgtc tacctgttgc ttggctgctt
    14821 caagtttatt aaagtcttca taccgggcat aggccgtcga aaatgcatct gctacagact
    14881 ggattaatgc gatctgttct tcgcttagcc gcgttgtatt tcccacatac aacatgccct
    14941 gcaggaatgg aaggaagtgc agataaaatc cgttaggagg cagcgtcttg atgtattgtt
    15001 cggcagaagc aaacgaacgt tgttgcacga gcagatctgc cagccctgca aagtcagatg
    15061 tctcccagtg gtccacgtaa tgttgacgat cgcgccagtg gcttattaca tatatgatct
    15121 tgcccggcat gctatatggc atatgaaatg cggcgatcgc ttttccatct ggtgtagaca
    15181 gaaatgtatg gatcatttgc tgtgtatcat ccattataaa aacaccgcaa cgaatgaatg
    15241 gtaagccgag tattgtaagt tcgttccata tcaatggagt gatcctgtca agatcaccga
    15301 ctgtgcgcat tgaggctata tctgcgcgta tgcgatccag tgcagcctgc ttcactgcct
    15361 ctcttgcatt tgcttccgac ttctgcaatt cgatataccg cctgaaggtg agatcgatga
    15421 tagtggcaaa acgctttaat attcttattt catcatcatt gtatcttagg gccgaccacg
    15481 catacaaaca tccaacacta aaactaaaaa agtgaccatg ttccctttcc tgtttcttaa
    15541 aatgaggaac ttccggtaac gtaagccctg cagaaagatt ttcatagtaa gacctgagtt
    15601 gttcgcccgt caactcggga aaataatctt cctgcttcat ccatgcatga taaatattct
    15661 gcagcaccgg atggcccgcg agcattaccc agcccaccaa tgaaagactg tcaccatcgg
    15721 caccggacgt cgcagaatac aattgcgctt tgaacgattc ttttgtgagc agcccaacac
    15781 cacaacgtat cggattaatg ccaagctttc ttaattcagt aaacaccatg ctggcggtag
    15841 cggaaagatc gttgctgttg tgcattgcca tcgccttgcc gcgtactttt tccaatgcgg
    15901 cttcaatggt ggcttccctt gcgttttgtt cagcgcgctg caggtcaaga taccgcctgt
    15961 aagtttgccc gaatacactg gcaaaacgtt ttaatatttc agatgcttcg tgaggcaggt
    16021 gctggacgga aaacgcaaac aatgttcctt cagagaaata aaaatcgtta tgaactaccc
    16081 ggggtggaag caattttata tcatacttca ccgggtagcc cggatagtta ttgatcgcag
    16141 aaaaatactt ttccagatca tcgcccttca attcgtatga aaaatgtttc ttcttacttt
    16201 tccatccctg caggccttct tcgagcaacg gatgcagcct ggtatccagg ttgcccacta
    16261 cgaggtctgc tttcccgtta gccgagggct ttgcggtcca aacttcaagc tcgtttggtt
    16321 catgcatgat gccaataccg caacgaatgg tttctacatt caacctcgtg agttcgtcga
    16381 acatagcggc aaccgtgtct gcaacatcct ggctgctgtg catcgccatc gttttgcttc
    16441 gcaccctttc cagtgatgct tcgatctgcg cttcacgggc ctgcgcttcg gctgttcgca
    16501 aatcaaggta acgtcggtat gtttgtccga ataccgatgc aaaacgttgt atgatcttct
    16561 tatgctctcc agggatcggt tcgtttgtga atgaaaacac agcaccgtcc gggaaaaaga
    16621 agtcggtgtg aaattcttta gatggaagcg cgttcaggtc aaacttagtc ggataatatt
    16681 tttcgttgtt gatagcatga taataatcct ttagatcatc gttagccagt tcgtactggt
    16741 gaaacgattc ttttgctttc catgcgtcat aaacagaccg cagcatttta tgcgcgtcta
    16801 ggtctaattt gcccgtaatg agtttcgcag gcccgccgcg cattgcccgc gcggtccaaa
    16861 cttcggcgat gttatcgtcc ccaaatatta atattccgca acggttcgtg ctgatgttaa
    16921 gatgcacaaa ctcggcaaag gtggccgcaa cggtttcacc cacatcgctg ctgttgtgca
    16981 tagccatggt tttactgcgc accctttcta acgacgcttc gatctgcgcc tcgcgcgctt
    17041 gtgattctgc ctttttcaga tccaggaagc gcccatacgt gagattgaac acgccggcac
    17101 atctttctat taccgacacc gtctcgtcgg aatttggggc aggcaccaca aacgcaatta
    17161 tgccatattt aaaaggcgcg atgatcgtat ccgtcgttct tccttcgacc aatttttcat
    17221 ttacggtcag tttcatctct tcccgcacat acttaagcca accagacaaa tctttttcat
    17281 gaaaattgag gatcattgat cccttttgtt ctttccagca tgcaaacatt tttccgagcg
    17341 cagggtgacc gctgatcttc gttgacacct gcttttcgat ctctttgccg cccggttgcg
    17401 tcatccacca atcgaagatc tgctcctgtt catttacaat tgcaatcata ctgcggatcg
    17461 gaacaactcc aagatgattc aactgctggt ccagtagcaa agcggtttca gcgagttcct
    17521 cgcttttgtg cattgccatt gttcgtgcgc ggacgcgttc gagggcgagt tgaatttgcg
    17581 attcccttgc ctgtgcctct gccttttgaa ggtcaataaa tcgacgatac gtcaagctgt
    17641 acacagcggc aaaacgttcc agcacattca tcatctctgc aggcaaaggt tcgagcgatg
    17701 aaatgttgag ccatccatgt gagaagaagg cgatattatg cactctcctg ttcttaaaat
    17761 attcgtcgtt gatggttaat ccaatttgcc ggacatattt cagccaggcc tttaattgtt
    17821 tgccggtaag atcaactaca gtagatttca aacctgcctt ccatccttca aagagtttcc
    17881 ttactgtcgt cggctcttca agactaactc tatagggaac atttatttga ttgcccgatt
    17941 ggtcggtaag ccacatatcg gcaacgcctg ccgattcgtc gagaacacca atgctgatgc
    18001 gatcgggcgt attgccgagt accgataatt gtgcaaataa aacagcggcg gtttttgaaa
    18061 ggtcttcgct cttgtgcatc gccattgtgc tgcttcgaac tttttcgagt gctgcctcga
    18121 tctgtgcttc tcttgcgctt gcttctgctt tttgaagatc aaggaagcgt gtataggtca
    18181 aatcaaaaac actggcaaat ttttccaaaa tggaaacggt ttccggagat ggtggcaatg
    18241 ccgtagaaaa agcaagcatg cctttggaaa acaacgcaac gctgatcact ctgcggcctg
    18301 cagtttctgt acttttcacc tcaacgccac tcaccttatt cctgtattga agccaggcct
    18361 ccagttcgcc ggatgtcagg tctatcacga tcgatgtatc tttcctcttc cacgccttat
    18421 aaattttgtt tatcacggtc ggctcatcaa tacttacttc gaatcctgcg tttacttttg
    18481 atccggttcc gccccagtca gtaactctaa attccatcac gccttcagct tccttcatga
    18541 tgccgatggt tatttggatc gcgcttactc ccaattgagt gaattgctga aaaagcaggt
    18601 gggcggtttc agataattca tcactgcgct gcattgccat ggtccttgcg cgaactcttt
    18661 cgagcgcaag ttgaatttgc gattctcttg cctgcgcttc tgctgtttgg aggtcgagaa
    18721 aacgggtgta gccgtgatcg aacacttttg caaatcgctt tacgatatca ttttcccgtt
    18781 catcaaaaga tttcctggaa taactggtga tgtgaattgc tgtgtttttt gccaatccca
    18841 ccgacatcgt ggcaaaaggc gcttcaagaa gaaccgtttt ttgctcttct ggaatatgct
    18901 tcaaaccggt attattaaac agatgccgga agagatcgtt cttttcttca aacggatagt
    18961 gttttgtaaa gaaatcgttg ccgctttctc ttgtgttcgc caggtctttg aggtacgcaa
    19021 tatcagtgta ggggaccaat attttaccaa aatgctgatg ctgcctgttt tcaagccacc
    19081 acaaaacatc ttttgaacct tcctggaaaa caattatgat ggcggtataa aaatcgatgt
    19141 tcagctcctt caatctttca aaaaccgtat gcatcacttg ctccaattcg ccacttacct
    19201 gcattgacat cgttcgtgca cgcacacgtt cgagcgctaa ttcaatctct gcttctcttg
    19261 cctgtgcctc cgctttctgc aggtcgagaa aacggatata gccctgttca aaaaccttag
    19321 agaatctttt gaggatatcg atctctttgt ctgaaagtgt tttctcgtga tgaaagtgga
    19381 tgccgatgat cgaatgtctt gccagggcaa aacactgcgt gagaaactgc tgtccaagga
    19441 tccagttctt tagttcttcc ggaaggctcc ggtaatcggt gtgttcaaaa gcaaatttga
    19501 accatgtatt tttttcttcg aaagaatagg tctttgaata aaaatccagc gcagcgttat
    19561 aggcgttcca gatatcggtt acgatcggtg tctcatagaa agcggttctg aagcaacccg
    19621 ggtaatcacc atgatcgtcg ccgatccaaa tattcatatc ccttgaatgg ggaatgtgtg
    19681 ttccaatgaa ggcggctcca tcgatggcaa agtcaagttc tttcagcttt tcaaacacaa
    19741 cctttaccac ttcgcgtaac tggtcgctgt gatgcatggc gagagatgaa gagcgcactc
    19801 tttccaatgc ggcttcgatc tgtgcttctc tagcctgcgc ttcggatctt tgcagatcga
    19861 gaaaacgtgt gtaggattgc tgaaagactt ttgtaaagcg caccaggatc tcaaattggt
    19921 tgtccccaag cgcctcaaga ctgccaacta caagcgcacc aaaatttcca aacgaggagt
    19981 tcacaaaggc acgcttattt gccctcatcc ctgccttaac cgaatcgggc aacaaagaca
    20041 tttctgtttc tgagaaaaag aattcatccc aatctttttt gagtgctcct tcattttcat
    20101 atatccattt tgaagctctg tcttcccatc cctttaagaa ggaaaggtag ccgggatgtt
    20161 catgataagg cacaaagaaa tcccttggtt ccaggggttc ttcgggattt gccatgaacc
    20221 aacgggaaga tcttgtttgg gggtcgatta tcaaaatgag gcatcgtgtg agaacgaaat
    20281 caagccggat caattcgtta aacagcgttc ccgtgatggc gtttatttcc gctgaattgt
    20341 gcatggccat tgtcctggct ctaactctct ctaatccgag ttgtatctgc gcttccctgg
    20401 cctgcgcttc cgcatgtttt agatcgaggt aacggcgaaa cgtgaatgag aacaccgagg
    20461 taaatcttcg gaggatcttt cttttttctt cgtcatgcgg ctgtagtgaa aaagtgaaca
    20521 gcgccccctg ttcaaagcaa ctgccataaa aataatggtc atgagcaggc cattctgtgt
    20581 tcgcggtata cgtagcagag tatgtggtta gatgtgcgac gatcttgtaa taatttttta
    20641 catcatcgcc ttttagtgca taattaaaat catccttttt ttccagccag gcattgtaca
    20701 tacccgtcca taaaggatgc agcgatagcg ggatgctccc aataccgctc atttggtttc
    20761 cctgcggcga tgcagtagcc acccacacat ccgctgtgcc gtcgctatgg agaatcgtaa
    20821 ttccgcaacg catcgtttct atccccagtg cggagatctc atgaaatacg acagcggttg
    20881 ccgcgctcac ctcttcgctt gactgcatgg ccatagcgct gtaccgaact ctttccaacc
    20941 ccgcctcaat ctgtgcttcc cttgcctgcg cttcagcttt ttgcaggtcg aggaaacgct
    21001 ggtatacggt gccgaattca cgcgcaaacc tgagaacaat agttttttct tcttctgttg
    21061 ccttacgtgt atgtgaaaaa ccgaggtatc cgaatttgca atatccctcg gtggtgtaga
    21121 tcccgtttgg aacatcagcg agcgttggcc tggcgtcttc aggcattgac tcaaatactt
    21181 cggaaaaaag ttcccataac tgcggcatta tttctttcgg aaattcaaaa cagttgatcg
    21241 catcgggtcc gctgttcttc catcgttcgg cagcttgttg ccattgctca acagcgtcca
    21301 gcctgaattc atgcgcaccg atatttcttt ttccctcttt gccagtcatg cggaatgtga
    21361 acgaattttt ttcaaggtct atcagcgcga gcgaggcggt cagagggtgt atgcccaggg
    21421 catcgaactg atcaaaaaga actgacaata cttcattcag ctcatcggtg ttatgcatgg
    21481 ccatcgccct ggcccgaaca cgttcgagcg aaagttggat ctgtgcttcc cgtgcctgcg
    21541 cttctgcttt ttgaagatcg aggaaacgtg tgtatgcctg cccgaatgca tttgcaaatc
    21601 gttttatgat cgcattctgt tcatcggtga acggccgggt gtcatactta cagatggcca
    21661 cccaggtgtc tttcagtacg actgtagtcc acacaaaccc gggcttgcta tagaggtact
    21721 ctttcgcgtc atcagggtat atgtttaaaa ccgatctttg aaaaatatgc cttagaaaac
    21781 gatctttctc atccttagta aaaacctcca cgctcaaatc aattcctttc ttaaaattat
    21841 cgaggctgat cttgcttttc tgaaaaaaag gatgatcgaa ccagggtact gtaacccggt
    21901 aggttaccct ttccgtctca tttttgggcc cggtgatcca gagatcccag tcgccgtagc
    21961 taagcccgtt gctgaagttt acaatgtcca ggtcgacacc aaggccgatc aattgatcag
    22021 caaacaggtc ggtaacctcc agcagatcgt cttgatgttg catcgccatt gtcttagcgc
    22081 gcactctttc cagtcccaat tcaatttcag cttctcttgt ttgcgcctct gctcttagga
    22141 gatcgaggaa acgagtgtat gattgatcaa atacagttgc gaaacgcttg aagatcttat
    22201 tctcctcatc agaaaataag tgatcatcat atttgcccat tgcaaaccag atattcgtca
    22261 gccggaaaaa cgaacgagcc atcccgcggt tatccaatat atatttttgt ctttcctcag
    22321 ggatgatgcg tgcttcggtg atctcaaaaa atcttcggaa aaaaatattt ttttcttctg
    22381 cgctgctgag atcggtaaag aagtcaacat cggttttagc gcgttcattg aaacggttaa
    22441 atactgcgtt atcaaaataa gggaagtgaa ttttcgccgg gtatgcctgc tgtgccgtcg
    22501 atacgtagat atgccaatcg ccagcctcat cgactttgca gaaaagtgca tattcgaatc
    22561 gcatcccgat agtcaacaat tgttccgtga ccacttttat tacatcatgc aactcgctgc
    22621 tgttgtgcat cgccatcgac cggcttctca ctttttcgag agccgtttct atttgcgcat
    22681 cctttgcttg tgcctctgca agcgcaatat cattatagcg ctgatagcac agctcaaaaa
    22741 catttcggaa tcgctttaat atgattattt gatccgcaga aacaggtttg aatgacgaga
    22801 tacttagtgc accgagccca atggaataag aatagtagta aacgttgatg gcttcattca
    22861 gtttcgcgtc aggtaaatat ccaaggcttt cccggtactt cctccacgcc tccatttcgt
    22921 tttcggcgat cgcaacttga gcaaaagcat cgctggccgt tcgcaactgc tcagcccatt
    22981 tctttactat tccgttcgtt gtataatcga tctcgatatt cccggtaaca ccataatcag
    23041 aatagtagct gacaatcgtt tggcgcgcct cgttgttgat gatgatctcg ctattcctga
    23101 gatccgtaaa accaagtgag ccaagctctt taaaaatcaa tgtggcgatg ccggctagct
    23161 cgtccggttt tctcatgcgc attgcagcca gccgaacatt ttccaaagcc gcttcaatat
    23221 gtagctcatg ttgcgttcgc tccagctcaa ttgttttact ggctagttgt tctttcagtt
    23281 cgacatcggg tgactgcagt tcgccttgtg tatcgtccat tttatcgatt ggaatgacga
    23341 aggtaaattt actgtgt
//
LOCUS       DASQJI010000829         8416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2438459,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000829 DASQJI010000000
VERSION     DASQJI010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8416
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2438459"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(334..1167)
                     /locus_tag="VEV83_21665"
     CDS             complement(334..1167)
                     /locus_tag="VEV83_21665"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYK47806.1"
                     /translation="MRTTIVVTNFSDSSRNALEYACEFLGGTGVRILLLNIFSFPAAL
                     TSDAICVAAMSETIADDERLLEDEYDWVKTKYPGVNIESEMVTGDFLEELEEKVGNED
                     VALIVMGAGGHYDDLLSWDANIIDTFVDLRTPVLVIPSNVKYHPVKKVAFACNYYRKD
                     LETPVSLIRRLIQFTKADLYVVHVVGSSAVVDEEALKSKELLQQNLADLAPVYYEPAF
                     PNVITAIDDFTAEQKIDLLVVIPGRHGIWDKIFQQQHAKGLVHLNHVPIMSLYTDAGF
                     I"
     gene            complement(1453..3033)
                     /locus_tag="VEV83_21670"
     CDS             complement(1453..3033)
                     /locus_tag="VEV83_21670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HYK47807.1"
                     /translation="MAEHNSLVEYGSRRAIITITAVFCALLEIIDTTIVNVALPNMRG
                     SLGATLSEVSWVITAYSIANVIIVPMTSWLSQQFGRRNYFAASVIIFTIASFLCGNST
                     SITELIIFRFIQGLGGGALLVTSQTIIIETYPPEKRAMGQAIYVIGVIIGPTLGPPLG
                     GYIVDHFSWPYIFYINIPVGIIAALLTLQYIRSPKYAEKRAARDVDWLGIFLLTIAVG
                     SLQYILEKGQEDDWFSSKLIITLTAAAILAFYCFIWRENVYKYPVVELKVFRNGNLRM
                     GVLLSFIQGFGLFGSTFIIPLYTQGILGWDAFQSGMLMIPSTLMVAFMMPIIGQMIQR
                     GVSQKYLIAIGMIIFFLYCLMTYKVMTPHTSAENFFWPLMVRGMGLGLLSVPISTMAL
                     STLKGVEIGQGAAFTGMMRQLGGSFGVAMISTYLTRDIVSHRGNLVTHLNMYDPAVQD
                     RVQAMAQGMQQKGMSPDVALKSAYEMLNGSVSLQATILSYMDIFLYVGCMFLVCVPIV
                     LIFIKKSRAKLSMAEAAH"
     gene            complement(3647..4750)
                     /locus_tag="VEV83_21675"
     CDS             complement(3647..4750)
                     /locus_tag="VEV83_21675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HYK47808.1"
                     /translation="MATTQKKAGDAPTKKKSKRFLIVLLLLLIAGGWFGISKYMYARH
                     HETTDDAQVESNINPVIPKISGYVTDVRVHENQRVRKGDTLLLLDDRELRLKVEEAEA
                     ALGTAESNLSSAKASTSASQANIATSQVAVGTIDAQIDAAKVNVWRTTQDYNRYANLI
                     QDHSVTQQQFEQAQAAKETAEKQLQVLQQQKLQAARQTNAVASQSAATSTQIGVVNST
                     IKQRQIDVENAKLYLSYAVITAPADGIVSKVNVQTGQLLQAGQATFSIVQDNDIWIVA
                     NFKETQFDDLKIGQKVTVEVDAFPGHEFEARLASFSPATGSRFALLPADNASGNFVKT
                     VQRLPVRIEFVNKQDPLVPQLKPGMNAYVDVHL"
     gene            complement(4769..6094)
                     /locus_tag="VEV83_21680"
     CDS             complement(4769..6094)
                     /locus_tag="VEV83_21680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK47809.1"
                     /translation="MRHERPKILLTGFLLCIAFHLEAQEVRTLTLKEAIELGIKNSKQ
                     LQLSKARIDEAVAATTEATQRRLPDASVSANYLRFSNAKVSSYAKDSTAIAPLGINQV
                     IYGTATVSLPIFSGFKIRFGIESARYLEKAATLDADNDKQEVILNTIGAYVNLYKANI
                     AAKLVEENLLQSRQRDTDFANLERNGLLARNDMLTAQLQTSQFELGLLDAQNQIQLAQ
                     VNMNLMLGLPESTKLTLDSASLQAPGAVRTIEEYEQVAEQNRYDVKALYNRRKAADAA
                     IAAAKGEYYPSVGISGGYMAADLPKFITITNAFNAGVGVKYSLSSLWKTDAKVQQAKA
                     RERQVEASEAMLRDDIHLAINRAYEDYLSGLKKIEVLNKEVDVSTENYRISQNKYNNS
                     LLTLTDLLGADVAQLRAKLNLTLAKADAYMSYQTLLQKSGLLDDQTISK"
     gene            complement(6157..6729)
                     /locus_tag="VEV83_21685"
     CDS             complement(6157..6729)
                     /locus_tag="VEV83_21685"
                     /inference="COORDINATES: protein motif:HMM:NF027619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYK47810.1"
                     /translation="MKVKDENKITDVYSATLKLVKETGVAGITMQAVAKEAGIATGTL
                     YIYFANKEELIAKLFDVSVRNTAAGIFRNYDPKDPFKVGFRKIWENMLRYRLSNFNES
                     IFIEQCFHSPFVDEDTRVSIKKMFDPMINLLQRGKEEHLIKNIDTFWLVAFMTGTINE
                     VAKRIIYFSKKPTNDILDANFQMCWDGIKS"
     gene            complement(7008..7898)
                     /locus_tag="VEV83_21690"
     CDS             complement(7008..7898)
                     /locus_tag="VEV83_21690"
                     /inference="COORDINATES: protein motif:HMM:NF027787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HYK47811.1"
                     /translation="MKRFAIAFAFLLFSKGAYLQTTNPEKILEKKDVEYAYPRWSKDG
                     KHILFQSNESGKWQIYVMDENGSNIRRITKDSSNNNFLDWSPDNKRIAFVSDRTGNEE
                     IFVMNADGSDQKQLTFTHARNIHPYWTPKGDKIFFNSTRDDPNAFEIYVMNADGSNVK
                     RITHSADDETCARLSPAGDELVYLKNNEHGLDDVFIMNLKDSSEQNITNTATTDGWPC
                     WLAGGNKILYSGREEGRYKVFMYDIQTKTTKRLTDPPPPSYDARATITADGKKIVFNR
                     QTDGIKNTIGIYVLDLHQQL"
     gene            complement(8082..>8416)
                     /locus_tag="VEV83_21695"
     CDS             complement(8082..>8416)
                     /locus_tag="VEV83_21695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fibronectin type III-like domain-contianing
                     protein"
                     /protein_id="HYK47812.1"
                     /translation="KLDKPAEELKGFAKTNLLQPGKSETITFTLNPRDLASFDTNSSS
                     WIGEARKYIVKLGASSLDIESKASFDLPSELVVEKDHKALAPQVAISEFKRYEYKFLR
                     FSWILSSR"
BASE COUNT         2119 a         1939 c         1791 g         2567 t
ORIGIN      
        1 cttcgatagg cgtgatcgaa aatgctgatt atttatcttt cgatcaaaaa cgcgacattc
       61 tttttaataa tgccatgcgg tttttcagat tggatgagag tacgtttaag tgaagtgagg
      121 tatttcgcac agagcacgca gagcaaacgg cgatccggtt tgcttgcatt gtgcgcatct
      181 gtgtatatct gtgagatatt cttttaataa cgcagttcgt tttttcatat tggatgagta
      241 ggtttacgaa atggtttagt tgtttcgcac agagcaaacg gagattctga ttacatcctg
      301 cgcattcgtg ttactatgtg agcgaatcct cgcttaaata aaacccgcgt cggtatataa
      361 cgacattata ggcacgtggt tcaaatgcac cagtcccttt gcatgttgtt gctgaaaaat
      421 tttatcccag atgccgtgcc tgccggggat cactacaagc agatcgatct tttgctcagc
      481 ggtaaagtca tcgattgcag taatgacgtt aggaaatgca ggttcataat aaaccggcgc
      541 aagatctgct aggttttgtt gcagcaattc tttacttttt aatgcttctt catcaacgac
      601 tgcagaggaa cccactacat gcactacgta aagatccgct tttgtaaatt ggatcaaacg
      661 ccttatcagc gataccggcg tttcaaggtc cttacgatag tagttacatg caaatgcaac
      721 ctttttgact ggatgatatt ttacgtttga aggaatgacg agcaccggtg tacgcaggtc
      781 gacgaacgta tcgataatat ttgcgtccca ggaaagcaga tcatcgtaat ggccaccggc
      841 gcccatcaca attagcgcca cgtcttcgtt gcctactttc tcttcaagct cttccaggaa
      901 atccccggtc accatttcgc tttcgatgtt gacgccagga tacttggttt tgacccaatc
      961 atactcatct tccagcaatc gttcgtcatc tgcaattgtt tcgctcattg ctgcgacgca
     1021 gatcgcatcg ctggttaacg cagcggggaa actgaaaatg ttcaggagca aaattctcac
     1081 gccggtgccg ccaagaaatt cgcacgcata ttcaagtgcg ttccttgatg aatcagaaaa
     1141 attggttact acgattgttg ttcgcatgtt attattctat ttcttgaaag catgtttttg
     1201 tcgttttcga aaattgtccg ttcaacctct ctaatatctc agtttgcgga tgaaaataag
     1261 gtgataaggt tgggatagtt gcaagtatgt cttttactaa ggtaataagg tttggaatcg
     1321 ttttcgatag ttcctcggca aatggagatt ttgcgcactt gggcaaacca acttattcct
     1381 tagtagctcc tcctcccaaa ataaaacaac cttaaaccat tacacatata tgtccattcg
     1441 actatagcaa catcaatgtg ctgcctccgc catgctgagt tttgctctcg actttttaat
     1501 aaatatcaat actatcggca cgcacacaag aaacatgcat cctacgtaga ggaatatatc
     1561 catataagat agtatggtcg cctggaggct taccgaaccg ttcaacattt cgtacgcaga
     1621 cttcaacgca acgtcgggcg acataccttt ttgctgcatt ccctgcgcca ttgcctgcac
     1681 gcggtcctgc acagcaggat cgtacatatt cagatgagta acaagattac cgcgatggga
     1741 aacgatatct ctcgttaaat acgtcgatat cattgctaca ccaaaagaac cacccagttg
     1801 cctcatcatc cctgtgaacg ccgcaccttg tccgatctca acgcctttca acgtcgaaag
     1861 cgccatcgtt gaaatcggta ccgatagcag tccgaggccc ataccgcgca ccatcaaagg
     1921 ccaaaagaaa ttttcggcac tggtgtgcgg ggtcatcacc ttatacgtca tcaggcaata
     1981 caagaagaaa atgatcatac ctatagctat caggtatttt tgcgatacgc cgcgttgtat
     2041 catttgtcca atgatcggca tcatgaaagc aaccatgagc gtgcttggta tcatcagcat
     2101 gcctgattga aacgcatccc atcccaaaat tccctgcgtg tataagggaa tgatgaacgt
     2161 ggacccgaac aatccaaagc cttgtataaa agaaagcaag acacccattc gcaaatttcc
     2221 gttgcgaaaa acttttaatt caacgacggg atatttataa acgttttccc gccagataaa
     2281 acaatagaaa gcaagtatgg cagcagcggt taatgtgatg atcagtttac tgctgaacca
     2341 atcgtcctcc tggcccttct ctaaaatata ttgcaaagag ccaacggcga tcgttaacag
     2401 gaatatccca agccagtcca catcccttgc cgctcttttt tctgcatatt tcggactcct
     2461 gatatattgc agtgtaagca atgcggcaat aatacctaca ggaatattga tataaaaaat
     2521 gtaaggccat gaaaaatgat caacgatata accgccgagc ggtggaccca atgtggggcc
     2581 aatgatcacg ccgatcacat aaatcgcttg tcccatcgct cttttttcag ggggataagt
     2641 ttcgatgatg atggtttgcg acgtaacgag caaggcaccc ccaccaaggc cctgtataaa
     2701 acgaaagata atgagttcgg taatgctcgt tgagtttccg cagagaaatg aggcgatcgt
     2761 aaaaattatg actgaggcgg caaaataatt tcggcggcca aattgttgcg atagccagct
     2821 cgtcatgggt acgatgatca cgttagcgat ggaataagca gtgatgaccc aactgacctc
     2881 gctgagcgtg gcgccgaggc ttccgcgcat gttgggcaaa gcaacattca cgatggttgt
     2941 gtcgatgatc tcgagcaatg cacaaaacac cgcggtgatt gtaatgatcg cccttcgcga
     3001 gccgtattct accagtgaat tgtgttctgc cataaattta tttctgatct ccgatgtctg
     3061 atctctgatt taatgatctc aattgacatc atgtttgcaa gatcaatgtg cacagatttt
     3121 tgggttgatt gaaccctttg ggttccgtcg tcattgtgtt cgcatagcaa ccggtttcac
     3181 cgattgctat tcagatttga ccctttcagg gtcgcatgat ttgataaccg accggtcctc
     3241 tccatttgaa cgcatcattt attaataagc ggctttctat tcacaattca caattcacaa
     3301 gtcacaattc acattgcacc gcatgttatt ctcgccaggc aaccgattgc tatttggatt
     3361 tgaccctttc agggtcgcat tcgattcgtc gcacagcagg tatttcacag gtcgcacaag
     3421 ttcttagccg ctcactcgtg tgttttgaac gttgtcattt attaattggc gacttcctat
     3481 tcacttttcg ctattcacaa ttgaccatca cctcagcacc ggttgccatt tgtgttcgac
     3541 ccatccgggt cgtacgtttt agtaaccgcg aaaacgtgtg tgttgaacgt tgtcattttt
     3601 taattagcga cttcctattc acaattcaca attcaccatt gacaattcac aaatgcacat
     3661 caacgtaagc gttcatcccg ggtttgagct gtggaacaag cgggtcttgc ttgttcacaa
     3721 attcgatgcg caccggtaag cgctgaacgg tctttacaaa gttgccgctg gcattatctg
     3781 caggcaagag tgcaaaacgg gaaccggttg ccggcgaaaa ggaagcgagc ctggcttcga
     3841 actcatgacc ggggaacgcg tcgacttcca ccgtaacttt ctgcccgatc tttaaatcgt
     3901 cgaattgcgt ttctttaaaa ttggctacta tccatatgtc attatcctgg acgatgctga
     3961 aagtcgcctg gcctgcctga agcaattgac ctgtttgcac attcactttt gaaacaattc
     4021 catcggctgg cgctgttatc acagcatatg ataagtacag tttcgcattc tcaacatcta
     4081 tctgtctttg ttttatggtt gaatttacca cgccaatctg cgttgatgtt gccgcgcttt
     4141 gtgaagcaac agcatttgtt tgtcgcgcag cctgtagttt ttgctgttgc aaaacttgta
     4201 attgcttttc cgcagtttct tttgcagcct gtgcctgctc gaactgttgc tgtgttacag
     4261 aatgatcctg gataagattt gcatacctgt tgtagtcctg cgtagtgcgc cacacgttca
     4321 cttttgctgc atctatctga gcatcgatgg tgccaacggc cacctgtgag gttgcaatgt
     4381 tcgcctgcga tgcgcttgtt gatgctttgg ctgacgacaa attactttca gcggtgccga
     4441 gtgccgcttc tgcctcctcg actttcaacc tgagctcccg atcgtcaagc aacaacaatg
     4501 tgtctccttt tcgtacacgc tggttctcat gcacccgcac atcagtaacg tagcccgata
     4561 tctttgggat aacggggtta atgtttgatt caacctgcgc atcatcggtg gtttcatgat
     4621 gacgggcata catatattta ctgatcccaa accatccgcc cgcaatgagc aggagtagca
     4681 ggacaataag aaatctcttg cttttctttt tggttggtgc atcaccagct tttttctgag
     4741 ttgtcgccat aagtttttta ttgctgagtt actttgaaat tgtttggtca tccagtaatc
     4801 ctgatttttg aaggagtgtc tggtaagaca tatacgcgtc tgctttcgcg agcgtaagat
     4861 ttagtttagc gcgcaactga gccacatctg caccaagaag gtccgtaaga gtcagcaggc
     4921 tgttgttata tttattttga ctgatcctgt agttttcagt tgacacgtct acttccttat
     4981 tcaacacttc gatctttttc aggcccgaca aataatcttc atacgctctg tttatcgcga
     5041 gatggatatc gtcgcgcaac attgcctcgc ttgcttccac ctgccgctct cttgcttttg
     5101 cctgttgcac tttggcgtct gttttccaga gcgacgacag ggagtatttg acgccaacac
     5161 cagcgttgaa ggcattggta atcgtgatga actttggcag gtctgcggcc atataccctc
     5221 ccgatattcc gacactggga taatactcgc ccttcgccgc tgcaatcgcc gcatcagccg
     5281 cctttctcct gttgtataac gcttttacat cgtacctgtt ctgttcggca acctgttcgt
     5341 actcctcaat cgttctcact gctcccggcg cctgcaatga agcagagtcg agcgtgagtt
     5401 ttgttgattc gggcaaacca agcatcaggt tcatgttcac ttgcgcgagc tggatctggt
     5461 tttgcgcgtc aagcaaaccg agttcaaatt gtgacgtttg cagttgtgct gtaagcatat
     5521 cattccttgc caacaaccca tttctttcaa ggttggcaaa atcagtatct ctttgtcttg
     5581 actgaagaag attttcttcc acgagttttg cggcaatgtt tgctttgtaa aggtttacat
     5641 atgcaccaat cgtatttaat atcacttcct gtttgtcgtt atccgcatcg agcgttgctg
     5701 ctttttcgag gtatctcgct gattcgatcc caaatcttat tttgaaaccc gagaaaatcg
     5761 gaagtgagac agtggcagtg ccgtagatca cctggtttat gccaagggga gctatcgccg
     5821 tgctgtcctt tgcatatgaa cttacttttg cgttactaaa ccttaggtag ttcgcagaca
     5881 cgctcgcgtc gggcaatctt ctttgggttg cttcggttgt tgcagccaca gcttcatcaa
     5941 tcctggcttt gctcaactga agctgtttgc tgtttttgat acccagctca attgcttctt
     6001 tgagcgtaag cgtccttact tcctgtgctt cgaggtgaaa agcgatgcac agtaaaaatc
     6061 cagttaataa gatctttggc cgttcgtgtc tcataacaaa acgatttatt ggaaaccgaa
     6121 acatgatgaa taaatattca tttgtattga aagaaatcag ctttttatac cgtcccagca
     6181 catctggaag tttgcatcga ggatatcgtt tgtcggtttt ttactgaagt atattatcct
     6241 cttcgctact tcgtttatcg tgcccgtcat gaacgccacc aaccaaaatg tgtctatatt
     6301 ttttataaga tgttcttctt ttccgcgttg caaaagattg atcatcggat caaacatttt
     6361 cttgatggag accctggtgt cttcatcaac aaacggcgaa tgaaaacact gctcaataaa
     6421 tatgctctca ttaaagtttg aaagcctgta ccgcagcata ttttcccata ttttccgaaa
     6481 gccgaccttg aaggggtcct tcgggtcata attcctgaaa atacccgctg cagtattcct
     6541 aacggaaaca tcaaacagct ttgcgatcag ttcctcctta ttcgcaaaat aaatatacag
     6601 ggtgccggtc gcgatacctg cttcttttgc aaccgcctgc attgttatac cggccacgcc
     6661 agtttccttt accagtttta aggttgccga ataaacgtct gttattttat tctcgtcttt
     6721 tactttcacg gtgcaaatat aaatgaatat ttattcattt atgaaataaa ttttgccggc
     6781 tttgtcattt gttgaaattt ttaaccgcgg cataggcaag gaattacctt gagtactttt
     6841 cataagacca cgaccacagg gcccggttgt aatgatcaat tttgttacca gaaatgagaa
     6901 ggtcttgaga ggttaaatgg ttatccgcag aattgacggc agtttatgca aatgcaaggg
     6961 cgccaatttt tcaccagcat actatgattc gggtcacgct ttccggctca cagttgttga
     7021 tgcagatcta acacgtaaat accaattgtg tttttgatcc catcggtctg cctgttgaaa
     7081 acgatctttt tgccatctgc agtaattgtg gcacgtgcat catacgaggg cggcggcggg
     7141 tcggtaagcc gtttggttgt tttagtttgt atatcgtaca taaagacctt gtacctgcct
     7201 tcctctctcc ctgaataaag aattttatta ccgcctgcca accagcatgg ccagccgtcg
     7261 gtagtggctg tattggtgat attttgttcg gaagaatctt ttaaattcat gatgaacaca
     7321 tcatcaagtc cgtgttcatt gttctttaaa tacaccagtt catcgcctgc aggtgaaagc
     7381 cgggcgcagg tctcatcatc agcggaatgt gtaatgcgtt tcacattact tccatctgcg
     7441 ttcatcacat agatctcaaa agcgttggga tcatcacgcg tggaattgaa aaatatttta
     7501 tctccttttg gcgtccagta aggatgaata ttccttgcat gcgtaaaggt gagttgtttt
     7561 tgatctgagc catcggcatt cattacgaat atttcttcgt tgccggtacg gtcagaaaca
     7621 aaggcaattc ttttattgtc gggcgaccag tcaagaaaat tattgtttga cgagtccttt
     7681 gtgatccgcc ggatgttgct tccgttttcg tccatcacat atatctgcca ttttccggat
     7741 tcgttgcttt gaaacaaaat atgtttcccg tctttcgacc aacgcgggta tgcgtattca
     7801 acatcttttt tctcaagaat tttttcagga tttgtcgttt gcaaataagc acccttgcta
     7861 aagagcagaa atgcaaaagc gatcgcgaaa cgtttcatgt aagatttttg ttcacctaat
     7921 ttaatccgat cgctcagtag tgacatatca gaaaatgata gttggtttat aagggtgaac
     7981 cgacggtcgg ggaaactggg atcttgataa tatccgctgt acttatttgg atagcaaact
     8041 ttgcattttc ttattgatca accgcgcagc gcgtgatgga tttaacggga ggataaaatc
     8101 catgaaaacc gtaaaaattt atattcgtat cttttgaact cactaattgc aacctgtggc
     8161 gccaaggctt tatgatcttt ctccactact aattcgctcg gtaaatcaaa tgaagccttg
     8221 ctttcgatat caagcgatga cgcgccgagc ttcactatat attttcttgc ttctcctatc
     8281 catgatgaag agttcgtatc aaacgatgcg agatctctcg ggttcaaggt gaaggtgatc
     8341 gtttccgatt ttccaggttg aagcaagttt gtttttgcga aacctttcag ttcttcggct
     8401 ggcttgtcga gctttg
//
LOCUS       DASQJI010000830         3195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2131425,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000830 DASQJI010000000
VERSION     DASQJI010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2131425"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1333
                     /locus_tag="VEV83_21700"
     CDS             <1..1333
                     /locus_tag="VEV83_21700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HYK47813.1"
                     /translation="PMASGVDRFDVPGKTVRPVWLSLNIPRDAEAGTYNGTVDVQSKN
                     AHAILNLKIIVQNQTLPPPHEWRYRLDLWQNPWIIADYFHVTPWSEEHKALLRKHLKL
                     YADAGGTYITTYGVHSPWGDNEYAIEHGMIEWIKRNDGSWKFNYDIFDQYVELAMGMG
                     IDKAITVYTPLPWGERFFYTDEKTGNHMQEQWRPVSDTFKKNWNIFLTDLRGHLEKKG
                     WFDKTYLGINENAIEQTLAAIRTVKANSTKWKITYAGDWDTKLDTLLNDYCSVYEHQP
                     SLDEVKTRAERGFTSTYYVCCHPGKPNNFLFSPPIEGRWMSWYVAAHNYNGFLRWAYD
                     SWPEDPLRDARYGSWAAGDSYLVYPGGNSCIRFEKLREGIVDHEKIMILRKLAAESND
                     ASIKALIASLNAHLQTLNGENTFNEQKLKADVSKGREILNELSEKLSGRRL"
     gene            complement(1355..>3195)
                     /locus_tag="VEV83_21705"
     CDS             complement(1355..>3195)
                     /locus_tag="VEV83_21705"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYK47814.1"
                     /translation="GGALLLFIIGSALTFYCEMKFNGKTSNAKITNITPETNYSSIIT
                     ASDQQNVVGRVTRFIMLNQDVIVLCWCLIILVKSIRLLSSLRTVQLLKRKHVFGAGEY
                     WDGQLKQLAQKIGVQTPVKLLKSAVAKVPMVAGHFKPIILVPATMLTTLPASEIEAIL
                     LHELAHIRRRDYLVNLLQSFADIIFFFNPAVLWLSSLIRDERENCCDDIAIGEVKNKK
                     QFIHALLSFQEYNLDSKYAATFPGRKKHLVERVKRIITNNNKTLTSMEKIFLASGILV
                     TCLAIAGFSNQQLPHQKPNVIPFANKPLAAIVDTVPASQKTDTNTSKSTINTSMNGKQ
                     YKIVEENGKVTELYVDNVRIPDDKISQYKETIDKIHSDVKKQVESLKVQQKQLAVQAE
                     LMQQKEVLMKQQLEKQAEQMKTEEKELKKQAEIMQEKQLSMKQALERQVAVMELQQKQ
                     VMIQADTMNEKEKIMNKEALEKQQELMKLTQKELDHSQQMGEKQEQLKKQMEQQTEEM
                     KIKSEQLMKQMEKMKEQQKSMEKKMLDSVEQFKSSLYRGKIKPVKANADDILLGLTND
                     PMIIKAVQQNTQVSEKLSIKYSKPNDQIIYNAVKAETQNAIKISAK"
BASE COUNT          787 a          703 c          700 g         1005 t
ORIGIN      
        1 gccgatggcg tccggtgtcg acaggtttga tgttcccggc aaaaccgttc gcccggtttg
       61 gctttcatta aatattccgc gtgatgcaga agcgggcaca tacaatggaa cggttgacgt
      121 gcagtcaaaa aacgcgcacg cgattttgaa tcttaaaatc atagtacaaa atcaaacgtt
      181 accaccaccg catgaatggc ggtaccggct cgacttgtgg cagaatcctt ggataattgc
      241 tgattacttt catgtgacgc catggagtga agaacacaag gcattattga gaaaacactt
      301 gaagttatat gctgatgccg gtggtactta cattacgact tacggtgtgc attcgccatg
      361 gggtgataat gaatacgcga tcgaacacgg catgatcgaa tggatcaagc gcaacgacgg
      421 ctcgtggaaa ttcaactatg atatttttga tcagtatgtt gaacttgcca tgggcatggg
      481 catagataaa gccatcactg tttatacacc gcttccgtgg ggcgaaagat ttttttatac
      541 ggatgaaaaa accggcaatc acatgcagga acaatggcgg cctgtttccg atacatttaa
      601 aaagaactgg aatatttttc tcacagacct gaggggacat cttgaaaaga aaggatggtt
      661 cgacaaaact tacctcggca tcaatgaaaa tgcgatcgag caaacgctgg cagcgataag
      721 aacggttaag gcaaattcaa caaagtggaa gatcacgtat gccggcgact gggacacaaa
      781 acttgacacc ttgttaaacg actattgtag cgtctatgaa caccaaccat cgttggatga
      841 agtaaaaact cgtgccgaga gaggttttac atcaacatat tatgtgtgct gtcatcccgg
      901 aaagccgaat aattttttgt tctctcctcc tatcgaagga agatggatga gctggtatgt
      961 tgccgcacac aactataatg gttttctgcg ctgggcttat gattcgtggc cggaggatcc
     1021 tttgcgcgat gcgcgatacg gttcatgggc cgccggtgat tcatacctcg tttatcccgg
     1081 tgggaatagc tgtattcgat ttgaaaagtt gcgggaaggg atcgtggatc atgaaaagat
     1141 catgatcctc cgaaagcttg ctgcggaatc aaacgatgcc tcgatcaaag ctttgattgc
     1201 ttctcttaat gctcatcttc aaactttgaa tggcgagaat acatttaatg aacagaaatt
     1261 aaaggcggat gtttccaaag gccgtgaaat tcttaacgag ttgagcgaaa aactttcagg
     1321 acggcggctt tgacggatat agctagtctc atgcttattt cgctgaaatt ttgatagcgt
     1381 tttgtgtttc ggcttttacg gcgttgtaga tgatctggtc attcggcttg ctgtatttta
     1441 tgctgagctt ttcagacact tgggtatttt gttgaactgc tttaatgatc atgggatcat
     1501 tggtcaagcc caacaaaata tcatcggcgt tcgccttaac cggctttatc tttccccggt
     1561 acaaacttga tttaaactgt tctacagaat ccagcatttt cttctccatt gacttttgtt
     1621 gttctttcat tttctccatc tgtttcatta gctgctcact tttgattttc atttcttcag
     1681 tttgctgctc catttgtttc tttagctgtt cttgtttttc tcccatttgc tgtgaatgat
     1741 ccaattcttt ctgagtcaat ttcattagct cttgctgctt ttcaagcgct tctttgttca
     1801 tgatcttttc cttttcattc atcgtatccg cttgaatcat tacttgtttt tgctgtagtt
     1861 ccattaccgc aacctgtctt tccagcgctt gtttcatcga caactgcttt tcctgcatta
     1921 tttctgcctg cttcttgagt tccttttctt ctgttttcat ctgttcagct tgcttttcca
     1981 attgctgttt catcaatacc tccttttgtt gcatcagttc cgcctggact gctaattgtt
     2041 tctgctgcac tttcaagctc tctacctgct ttttcacatc cgaatgaatc ttgtcgatcg
     2101 tctctttgta ttgcgaaatt ttatcatccg gtattctcac gttgtccaca tacagttcag
     2161 tcactttgcc gttctcttca acgatcttgt actgtttacc gttcattgat gtatttatcg
     2221 tgctcttcga tgtgttcgta tcagtttttt gagacgccgg gacggtatct acaatagcag
     2281 ctagcggttt gttcgcgaat ggtattacgt ttggtttttg atgaggcagt tgctggtttg
     2341 aaaatccggc gatggccaaa cacgttacaa gaatacccga tgctaagaag atcttttcca
     2401 tactcgtcaa agttttatta ttgttggtga tgatgcgctt tacccgttcg accaaatgtt
     2461 tttttctgcc gggaaatgtg gccgcgtatt ttgaatcaag gttgtattcc tggaacgaca
     2521 gcaacgcatg gatgaactgt ttcttattct tcacttcacc gatcgcgata tcgtcgcagc
     2581 agttttcccg ttcgtcgcgg atcaaagatg acaaccataa aacagcaggg ttaaagaaaa
     2641 agatgatgtc tgcaaaactt tgtaacaagt tcacgagata gtcccgccgg cgaatatgtg
     2701 caagctcatg caaaaggatc gcttcgatct cgctggctgg caatgtcgtt aacatcgtcg
     2761 ccggaacgag aatgatcggt ttgaaatgcc ctgcaaccat aggaaccttg gcaactgcgg
     2821 acttcaataa cttcaccggc gtttgcacgc caatcttttg cgcgagctgt ttcaattggc
     2881 cgtcccaata ctcgcctgcg ccgaacacat gctttcgctt cagaagttgt acagttcgaa
     2941 ggctgcttaa cagtcttatc gatttaacga ggataatgag acaccaacat aaaacgatca
     3001 cgtcttggtt gagcatgatg aacctggtga cccgcccgac cacgttttgt tggtcactcg
     3061 ctgtgataat cgaggagtaa ttcgtctcgg gtgtgatatt agtaattttt gcgttgctcg
     3121 ttttgccatt gaatttcatc tcacaataaa aagtcaacgc ggaccctatg ataaacagca
     3181 gcagtgcgcc accaa
//
LOCUS       DASQJI010000831         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3051246,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000831 DASQJI010000000
VERSION     DASQJI010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3051246"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1588
                     /locus_tag="VEV83_21710"
     CDS             <1..1588
                     /locus_tag="VEV83_21710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47815.1"
                     /translation="KKLYLVATMQQNLVYMAGVDLSQSFVTGGSIPVSELPSGILQVT
                     LFDANWVAIAERITFINHQEYYFQPEVGFSQLGTGKRKQNTLVINVPDSAGANLSVAV
                     TDAGIGTDSSDDIVSHLLLTSELRGNIYHPYYYFTDSTDTLQQQLDLVMLTNGWRRIN
                     WQDVVKGKMPTIKYKNDTDYLTLSGKLYGATPDDLKHGAFLLTILDNSDDTARRLEQL
                     PIEPTGNFSNPDIILYDTTTAYYKLMGSETIAGSSAISFNSSMPSPATVRIDTAATVL
                     FSDSATENYKRKLAQRQMLALKMQQGTTLAEVTVHARVKSAAQILDEKYTSPLFSSDD
                     AYKFDALNDPLANNSQSVLEYVRGRVAGLQIVVGGGGQASARWRGGTPTFYLNEMPVT
                     IDQLASTSMADVAYVKVFRPPFMGSIGGGASGAVAAYTRKGGDDKPKTAKGLPYKIII
                     GYTAEKEFYSPDYATFNNRNELDDLRTTLYWNPMVLTTKENHTIRIRFYNNDVTQSFR
                     VVLEGMTTDGRIAHVEKVVE"
BASE COUNT          451 a          363 c          398 g          381 t
ORIGIN      
        1 taaaaaatta tacctcgttg ctacgatgca gcaaaacctc gtgtacatgg ccggagtcga
       61 cttatcgcaa tcatttgtta caggtggatc gatcccggtt tccgaactac cgtcgggtat
      121 tttacaggtg actttgttcg atgcaaactg ggtagcgata gcggagcgga tcactttcat
      181 caatcaccag gaatattatt tccagccgga agtaggattc tcgcagctag gcacaggaaa
      241 aagaaagcaa aacacgcttg ttataaacgt accagactct gcaggtgcaa acttgtctgt
      301 cgcagtcact gacgctggca tcggcaccga tagcagcgac gatattgttt cgcacttatt
      361 gttgacgtcc gagctgagag gaaatattta tcacccttat tattatttca cagacagtac
      421 tgacacgctg caacagcaac ttgacctcgt gatgctcact aacggctggc gccgcatcaa
      481 ctggcaggat gttgtaaaag ggaagatgcc aacgatcaaa tataaaaacg atacagatta
      541 tttgacgctt tccggaaagc tttatggcgc cactcccgat gacctgaagc atggtgcatt
      601 cctgcttacg atactcgata acagcgatga cactgcaaga aggctcgaac agcttccgat
      661 tgaaccaact ggaaattttt caaaccccga tatcatttta tacgatacaa caactgcata
      721 ctataagctg atgggcagtg aaacaatagc cggctcatcc gcgatcagct tcaacagcag
      781 catgccttct cccgccaccg tgcgaataga taccgctgcg accgttttat tttctgatag
      841 cgccaccgaa aattataaac ggaaacttgc gcaacgacaa atgcttgcat tgaaaatgca
      901 gcagggtaca acgctcgccg aagtaaccgt tcacgcgcgg gtaaaaagtg ctgcgcagat
      961 tttggacgaa aaatatacct cgccgctttt cagcagcgac gatgcttaca agtttgatgc
     1021 cctgaatgac ccgctcgcga ataattcaca gagcgtgctc gaatatgtgc ggggacgggt
     1081 ggccgggttg cagatcgtag ttggtggtgg cggacaagct tcggcgagat ggcgaggagg
     1141 tacgccgacg ttttatttga atgaaatgcc ggttacgatc gatcagctcg catctacaag
     1201 catggcagac gtggcatatg taaaagtttt tcgtccgccg tttatgggct caattggtgg
     1261 cggcgctagt ggggcggtgg ccgcatacac acggaaaggc ggcgacgata agccaaaaac
     1321 tgcgaaaggg ttgccgtata agatcattat tggatacact gctgaaaaag aattttattc
     1381 acctgattac gcaacgttca acaatcgcaa tgagctggat gatcttcgta ccactttgta
     1441 ttggaatcca atggtgctga ctacaaaaga gaatcacacg atcaggatcc ggttttacaa
     1501 caatgatgtc acccaaagct ttcgtgtggt tttagagggg atgacaacag atggcaggat
     1561 tgcgcatgtg gagaaggtgg tggaataaga gaa
//
LOCUS       DASQJI010000832         8905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1518034,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000832 DASQJI010000000
VERSION     DASQJI010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8905
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518034"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VEV83_21715"
     CDS             complement(<1..644)
                     /locus_tag="VEV83_21715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47816.1"
                     /translation="MRTRSFRMILAAALIVLFSNCSKKDTPPQGVLIAYYQLLNDAAD
                     STGLNGPMTLQNTPFENGGIYCNGIYSHSPDPNYCTAQTPAINSLKFQSFSISMDFLV
                     TEKKRQPVWIIGTSCRWLGFYLEADGTVALLYNNWDFLATSKAYSLNEWHNAKISFDG
                     TTANIFLDSSLAGSLKFGNGYVPLNYDVCGTSDTEIGVTNFSNGEVLEGYVRNL"
     gene            complement(990..1277)
                     /locus_tag="VEV83_21720"
     CDS             complement(990..1277)
                     /locus_tag="VEV83_21720"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HYK47817.1"
                     /translation="MAKTIVVSSKAAVEIRKAATWYDEQSSGLSLRFMAELDYHFRGM
                     IKYPDSYKRVDRDIQRCLMKVFPYIIYFSVTIDEIVIIRVRHTKRKPLKRF"
     gene            complement(1270..1503)
                     /locus_tag="VEV83_21725"
     CDS             complement(1270..1503)
                     /locus_tag="VEV83_21725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HYK47818.1"
                     /translation="MAITKDEIDAMSSREKLDLLDMLWRSIEGEEYIDDAEDETEAEK
                     QILRERLDDYQQNRSSGIKWDELKDELTNRSNG"
     gene            complement(2045..2554)
                     /locus_tag="VEV83_21730"
     CDS             complement(2045..2554)
                     /locus_tag="VEV83_21730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47819.1"
                     /translation="MKTIFLKPSVLMVATATLFSSCASIMSKTAYDVSINTTPDSANI
                     VVTDKKGKQVYEGQSPAEVSLKSGAGFFAKAEYQVKLSAPGYAEKTIPITYQLNGWYL
                     GNIIFGGAIGLLIVDPATGAMWKIADPKINATLTKTTNTSGMTTPTLNVVDIKDVSQE
                     LKSQLVRIN"
     gene            3794..4906
                     /locus_tag="VEV83_21735"
     CDS             3794..4906
                     /locus_tag="VEV83_21735"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK47820.1"
                     /translation="MKTKTGFRKKIRTVLIITLFWTLFACISFISQYFFIYDLVALKR
                     LSGSFPFGDEFIATVIFGIVGGLLAGYVLVFKMSSRYRGKSFVFGVINSGVVFILTYV
                     GLAGIGLFIIDLVYFSITGGISSAPSKSIDNVLFNILSPSFFINVFLFGLLVSCTQFM
                     LQVSDKFGPGILWKFITGKYYHPRQEERIFMFLDLKSSTTIGEKMNSKKFFGLMKEIF
                     SDITEPILDSHGEIYQYVGDEVVVSWPSGKGLADNNCLLCFYGIQEALEERREHYTHE
                     YSLFPSFKAGLHIGEATVGEIGVVKKDIVYSGDVLNTTSRIEGQCNNYDVNILLSSRL
                     LERMQLNGEYEHTALGEIALKGKNEKVVLYTINKGR"
     gene            complement(4938..5189)
                     /locus_tag="VEV83_21740"
     CDS             complement(4938..5189)
                     /locus_tag="VEV83_21740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HYK47821.1"
                     /translation="MTNEQIEKFLGADMKGSSLVRISFKTRNSIVGIFIRTPDFNELK
                     SKNFWRIVSEKNFEQWEKSKDFNLVRMFNGAEFTKLAIA"
     gene            complement(5265..5711)
                     /locus_tag="VEV83_21745"
     CDS             complement(5265..5711)
                     /locus_tag="VEV83_21745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HYK47822.1"
                     /translation="MAKSKETFGKKEKEKKRLKQRQDKLEKMEERKANAKKGKTLDEM
                     MAYIDENGNLSSTPPDPKKKIVFKQEDMNTGVPKHEEEEIVREGIISFFNDAKGYGFI
                     KDLKSHESIFVHANQLSEPVKENMKVNFEVERTAKGLSALNVKKSI"
     gene            complement(5761..6147)
                     /locus_tag="VEV83_21750"
     CDS             complement(5761..6147)
                     /locus_tag="VEV83_21750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47823.1"
                     /translation="MLDFQDIRAGNQVLVNSSGAKVTIVKVENNEILLNTIPHSSLFS
                     NEDISGIPLTTAMLRKLSFENEDANVWAGEGITIRLKEDGIFYGLRISKSRAKLQYLH
                     QLQNYISDYYALFRQEEYSLDVTLIN"
     gene            complement(6267..6545)
                     /locus_tag="VEV83_21755"
     CDS             complement(6267..6545)
                     /locus_tag="VEV83_21755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYK47824.1"
                     /translation="MNIYVSNLSFQLADEDLRALFAGYGEVSSAKVIMDRETNRSRGF
                     GFVEMPNDAEGQEAIKKLNGAPVAGKSISVNIARPKEKSDFKKRKNFW"
     gene            complement(6927..8213)
                     /locus_tag="VEV83_21760"
     CDS             complement(6927..8213)
                     /locus_tag="VEV83_21760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK47825.1"
                     /translation="MKNIGCFLLILIVTKTYSQPNVLPAVPQSGTIALTHATIHVGNG
                     DVIDDATIIFSNGKITSVGKNVATGDAKTIDCTGKQIYPGLILSDSNLGLTEIQAIRS
                     ERDEYELGDLNPDVRSLVAYNTDSKIINTVRSNGVLLANVVPNGGVISGSSSVMQLDG
                     WNWEDAAYKTDIGIHFRMPRLVPYSKENTETDILKRAYEQIDDVRNFFRDAKSYFNES
                     SHVQRNIKIESVKGLFDHTQTFFVHCNLVNEMMIAVEFAKEFGFKTVIVGGAESNKIT
                     DYLKDNNIAVILNEMHNLPIMQDDDVDMYAKLPYQLQQAGVSYCINDFDQMNRGRNIM
                     FNAGVAVGYGLTKEQALQAITLSPAKILGIDKQTGSLEVGKDANVIVSDGDLLDIRTN
                     NIIYAFIQGKQINLDNKQKQLYQRYATKYGFDTSGQ"
     gene            complement(8257..8655)
                     /locus_tag="VEV83_21765"
     CDS             complement(8257..8655)
                     /locus_tag="VEV83_21765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK47826.1"
                     /translation="MATIKRFEDILSWQKGRELNRIIGGYIDAGKFKRSFKLIDQVEG
                     SAGSIMDNIAEGFERAGNKEFIQFLYISKGSCGEFRSQLYRALDRKFIEQDEFELLYN
                     LAKEVIVLLQKLIDYLQKTELKGSKFKTNA"
BASE COUNT         2518 a         1940 c         1760 g         2687 t
ORIGIN      
        1 ttcaaatttc ttacataccc ttccaatact tcaccattac tgaaattagt aactccaatt
       61 tcagtatcag acgtgccgca cacatcataa ttcaagggaa catagccatt gccaaatttc
      121 agtgaaccgg ctaaactgct atccaggaaa atgtttgcgg tagtaccatc aaacgaaatt
      181 ttcgcattgt gccattcatt caaagaatag gctttggagg ttgctaagaa gtcccaatta
      241 ttatataaca atgctaccgt accgtcagct tccaggtaga aacccagcca tcggcaactt
      301 gttccaatga tccagacagg ctgacgtttt ttttctgtta ctaaaaaatc catgctgatc
      361 gaaaatgatt ggaatttcaa tgaatttatc gctggagttt gtgcggtaca atagtttgga
      421 tctggtgagt gactataaat tccgttgcag taaattcctc cgttttcaaa cggggtattt
      481 tgcaaagtca taggtccgtt aagaccggta gagtcagcgg catcgtttag cagctgataa
      541 tacgcaatta agacaccttg cggcggcgtg tctttctttg agcagttgga gaacagtaca
      601 attagtgctg ctgcaaggat catcctgaag gacctggttc tcattgcgtc ttaggtttgg
      661 taaaatacat tagcattaaa acaagtgcta tagcgaatat aagtgtttaa gcctattcat
      721 gcaagaatgg cgtagggcgg atagccgttc tgcgttgcag atggctcctt aggacatgac
      781 agacatcgtg cgcaagaccg ccatcgtgtt ttccaaaatc tccgacgtaa aaaattaagg
      841 gtcacagcac acgacgaacc acaatggaca ctacggcgaa ccaaaaaaaa tattgtggcc
      901 tttgtgtatc gttcggttcg ttgtggccaa agaaaatcca atggaatgtt atgccctgaa
      961 accaagaaaa aaggcgaaga tctatatgct taaaagcgct tgagaggttt tcgtttcgtg
     1021 tgtcgcactc gaataattac aatttcatct atcgtgacgg aaaaataaat gatgtaagga
     1081 aacactttca tcagacatct ttgaatatcc ctatcgactc tcttataaga atccggatat
     1141 ttaatcattc ccctaaaatg ataatccaat tccgccatga atcgcaggct caatcctgat
     1201 gattgttcat cgtaccaagt tgctgctttc cgtatttcaa cagcagcttt acttgataca
     1261 acgatagttt tagccattag aacgattcgt tagttcatct ttgagttcat cccattttat
     1321 gccgctcgag cgattttgtt gataatcatc gagcctctcc cgaagaattt gcttttctgc
     1381 ttcagtttca tcttctgcat catctatata ttcttcaccc tcaatcgatc tccaaagcat
     1441 atcgagaaga tcgagttttt cgcgcgacga cattgcatca atttcgtctt tcgtgatagc
     1501 catcgagatt ttttataaaa ttaaaaatat tattcgttct gacccactta aatgaaactg
     1561 agttgtttac aagtgcagat taacttgaga ataagggttc cattttcgcg aggatgatgt
     1621 gtaacgggtt gagtaactgt aaacagcttg atcaatgcaa gaccggcaca tgttccgttc
     1681 cccgttgcag atgcctcctt aggtcggcat gacaaggcat cgtgctcaag accgccattg
     1741 tgttttcaaa aatctcaaag cacacgacga actacaatgg acactacggt gaaccaaaaa
     1801 aaaatattgt ggcctttgtg tctccttcgg ttcgttgtgg ccaaagaaaa aacaacaaat
     1861 tgttcgtgca agaggttgag taatcgtaaa gagccatcgg ttccagatct gcgttgcaga
     1921 tgcctcgtta ggtcggcatg acaggcatcg tgtgcaagac cgtcatcgtg ttttccaaaa
     1981 tcataaaagc tcggccatcg ttcatcaagc gataaaaatt cataaagacg ctgcgaaact
     2041 atctttaatt tatccgtaca agctgcgatt tcaactcttg cgacacatct ttgatatcca
     2101 cgacgttcaa tgtaggcgtc gtcatgcccg atgtgttggt tgttttagtc aacgttgcat
     2161 taattttagg atctgctatt ttccacattg cgccagtagc aggatcaaca atcaacaacc
     2221 cgattgcacc accaaatatt atgttcccaa gataccagcc atttaattgg taggtaattg
     2281 gaattgtctt ttcagcatag cccggcgctg ataatttcac ctggtattcc gctttagcaa
     2341 agaatccggc gccggatttc agacttacct cggcaggact ttgcccttca taaacttgtt
     2401 ttcctttttt gtcagttacg acgatgtttg cgctatccgg agtcgtgtta atagaaacgt
     2461 cataagctgt tttgctcata attgaagcac agcttgaaaa taatgtggca gttgccacca
     2521 ttaaaacaga tggtttcaaa aaaatcgttt tcataattgg tttaattttt tttgccgatt
     2581 cttcaaatgt ggttttcggc atatggcttt ttgtcgtaga attagcgccc agggtaacta
     2641 taaaacgcac ttaaaaaagc gtcaataccg tcacccaatt ggctatgttg aaacgccggc
     2701 ggccacggat gagggttgaa aggctctgat gcaagaagtg tcacaaagca caccacgaac
     2761 cacaaggggc actacggcga accgaaacaa atattgtggc ctttttatgt ccttcggcca
     2821 aagaaaaaca acaaattgtt ggtgcgagag gttgagtaat cgtaaagaag tgatccgttc
     2881 gcgttctgcg ttgcagatgc ctccttaggt cggcatgaga ggcatcgtgc acgagaccgc
     2941 catcgtgttt tttagaaatc tgcgaggtaa aaattaattc gactcttcga attaacgatc
     3001 agggctcaac tgctgttcac cacagtagta caaaagctta atcaaggcgt acggacaaat
     3061 gtgcagtata tcatttgtcc ttgatttttc tttggttacc tatgaaggag aagtaaaaga
     3121 aagcgatcgg ttaagtaaga aagaaaaaat gcaagcagtt taagaatgag atccccgcat
     3181 ccgagaatga cgtgcgaggg atcgagtaat cttacgacac tgcttaggca agaaggatca
     3241 caaagtttcc aacgctgctt aggcaaaaag gatcacaaag cacactacga accacaaccg
     3301 acacgacggt taacgaaaac caaccttgtg gtctttgtgt attcttcgcg ttcgttgtgg
     3361 ccaaagaaaa agcaatggaa tattatgccg tgagagcacg aaaaaaggcg aagacccata
     3421 tgcttagttc ggcttcggct cctccaacgg atcaacccta gcaactgcag cagagcaccg
     3481 tagtcagaag gatcaccatc gaaataagaa taagctgttt cataatttgt tgtttttata
     3541 tagaagttat atttcgcaga tttgaatctt tcacaagaat atttcataaa tgtgtatgct
     3601 aaacgcggtt gtcaatgaac tccggactac ggtcaacgaa caacagtttg tgagagtact
     3661 acaacccgac cggcgtccaa ccttggccgg acagctaaca agggccgcgc aaagagattg
     3721 ctgcagcacc atcataaaaa cctcatctat ttattttcac ttatcttgtt ttcatagttg
     3781 aatcagaaag ttcatgaaaa ccaaaacagg ctttagaaaa aaaatacgga cagtgctcat
     3841 cataacttta ttctggacgc tgttcgcctg tatttctttt atcagccaat attttttcat
     3901 ttatgacctc gttgcgttga aaagattatc aggttcattc ccgttcggcg acgaatttat
     3961 tgccaccgtt atttttggaa tcgtaggggg cctgttagca gggtacgttt tggtattcaa
     4021 aatgagctca cgataccgcg gcaagtcgtt tgtattcggg gtgatcaact caggagtcgt
     4081 gtttattctt acttacgtgg gtcttgcggg gatcgggttg tttattatcg atctcgtcta
     4141 tttttccatc accggcggca tttcttctgc cccatcgaag tcaatagaca atgtactttt
     4201 caatattttg tctccttctt tttttataaa tgtttttctt ttcgggttgc tggtttcatg
     4261 cacgcaattc atgctgcagg tgagcgacaa atttgggcca ggtatattat ggaaattcat
     4321 tacaggtaaa tactatcatc cacggcagga agaaaggatc tttatgttcc ttgatcttaa
     4381 gtcttcaaca accatcggcg aaaaaatgaa cagcaaaaaa tttttcggac tgatgaaaga
     4441 gatcttcagc gatatcacag aaccgatcct ggacagccac ggtgagatat accaatatgt
     4501 tggagatgaa gtggtggtga gctggccctc gggaaaagga ttggctgaca ataattgttt
     4561 gctatgtttc tacgggatcc aggaagcgct ggaagaaaga agagaacatt acacgcatga
     4621 atatagcctg ttcccatctt tcaaagccgg gttgcacatc ggtgaggcta cagtaggtga
     4681 gataggcgtt gtaaaaaaag atatcgttta ctcaggagac gtattgaata ccacttcaag
     4741 gattgaaggg caatgtaata attatgacgt aaacatcctg ctatcctcac ggctgcttga
     4801 acgcatgcag ctaaatggtg agtacgagca cacagcactg ggagaaattg cgctaaaagg
     4861 gaaaaacgaa aaagttgtac tctataccat taataaaggc agataaattt tccgctcgtt
     4921 gcaaccagga caaccgatca ggcaattgcg agtttggtaa actcagcacc attaaacatc
     4981 cggaccaggt taaagtcctt cgatttttcc cattgttcaa aattcttttc agaaacgatc
     5041 cgccagaaat tttttgactt cagctcatta aaatcagggg tacggataaa aataccaaca
     5101 atcgaattac gggttttaaa actgatccgc acgagtgaac ttcctttcat gtccgcgcct
     5161 aaaaactttt cgatctgttc atttgtcatg ataaaataat tcttttttaa agtaatgctt
     5221 tacaaaaatc gtatcggtgc aacgacacgg gatacgctga tgatctaaat actctttttt
     5281 acattcagcg cgcttaatcc ttttgcggtc cgctccacct cgaaattaac tttcatgttc
     5341 tcctttacag gttctgaaag ctggttcgca tgaacaaaaa tgctttcgtg cgacttaagg
     5401 tcttttataa agccataacc ttttgcgtca ttgaagaaac ttatgatccc ctccctgaca
     5461 atttcctcct cctcatgttt ggggacaccc gtgttcatgt cttcctgttt aaaaacaatt
     5521 tttttctttg gatccggtgg cgttgacgaa aggtttccgt tctcgtcaat gtaggccatc
     5581 atttcatcaa gcgtttttcc tttttttgca ttggccttac gctcttccat tttttccagc
     5641 ttatcctgcc gctgttttaa tctttttttc tctttttctt ttttaccaaa agtctctttc
     5701 gattttgcca taaatatgtg tgtttagatt ctgcttacct aacaaacggc aagcagtaaa
     5761 ttagtttatt aacgtaacat ctaacgaata ctcttcctgc ctgaaaagag cataataatc
     5821 gctaatgtaa ttttgtaatt gatgcaggta ttgcaattta gccctgcttt ttgaaattct
     5881 taagccataa aaaatcccgt cctccttcaa acgaatggtg atcccttcac cagcccatac
     5941 gttggcatct tcgttttcaa atgacaattt tcttaacatc gccgtagtaa gcgggatccc
     6001 cgaaatatct tcattcgaaa aaaggctgct gtgcgggatc gtgtttaaca gtatttcatt
     6061 gttttcaacc tttacgatcg taacttttgc acccgaagaa ttaaccaata cctggttacc
     6121 tgctctaatg tcctgaaagt ctaacacctt tttattttac gttattgtat atcagcctcg
     6181 ttataaaaaa tgcaacctct aagcgacgaa caaacatcta aaggctgcaa gcttaagaga
     6241 tatttacgct cttattgaaa acctcattac caaaagtttt tccttttctt aaagtccgat
     6301 ttttcctttg gcctggcaat gttaacactg atcgactttc ctgctaccgg agctccattt
     6361 aattttttga tagcttcctg cccttctgcg tcattaggca tttcaacaaa gccaaagccc
     6421 ctgctgcggt tcgtttccct gtccatgatc accttcgctg aacttacttc gccatagccc
     6481 gcaaacagtg ctctcaaatc ttcgtctgca agctggaagc tcaggtttga aacatagata
     6541 ttcatttttt taatttgatg aattaaaaaa ttatttgaga aaacgcaagg taaaaaaaag
     6601 aagctgtgtg cagaatatct gtcggcagga attcaatcaa tacttttgta actcaaacat
     6661 gagcggcgaa gatacgtctt taagttgtaa gatttcgagc aattttaagg taacgcatca
     6721 cgcccggctg caaacgaaca ttgcaaatag atcgttaacc agttatgcac tgtttgagca
     6781 aacctcgagc ggaaagggtg cggggcattc ttcttggcat gaccccaacc agaagataga
     6841 cagattaaaa aaaacgtgca attcaacagc gaccaacaac taagaccaat ggtattttgg
     6901 aaccaatttt cgtggttccg tcgtctttac tgacccgatg tatcaaaacc atatttcgtt
     6961 gcgtagcgct gatatagttg tttttgctta ttatcgagat taatttgctt gccctggata
     7021 aacgcgtaga taatattatt cgtgcgtata tcaagcaagt ccccatcgct tacaataaca
     7081 tttgcgtctt ttcccacctc cagcgagccg gtttgtttat cgataccaag aatttttgcc
     7141 ggacttaatg taattgcctg cagggcctgc tcttttgtaa gaccgtatcc aaccgcgacg
     7201 cccgcgttga acatgatatt cctgccccgg ttcatctggt cgaaatcatt gatgcaatat
     7261 gacacgcctg cctgctgtaa ttgatacgga agctttgcat acatatccac gtcatcgtcc
     7321 tgcataatag gcaggttatg catttcgttc aaaataacgg cgatgttatt atctttcaaa
     7381 tagtctgtga tcttattgct ttccgcacca ccaacaatca ccgtcttgaa accaaattcc
     7441 tttgcgaact caaccgcgat catcatttcg ttcaccaggt tgcagtgcac aaaaaaagtt
     7501 tgtgtatgat caaacaaacc tttgacagat tcgatcttaa tatttctttg aacatgtgag
     7561 ctttcattga aatacgattt ggcatcacga aaaaaattac ggacatcgtc gatctgctcg
     7621 tatgcacgtt tcaaaatatc cgtctcggta ttttcttttg aataaggcac caggcgtggc
     7681 atgcgaaagt ggattcctat atccgttttg taagcagcat cttcccaatt ccatccgtcc
     7741 agttgcatca ccgaagaaga gccgcttatc acgcctccgt ttggaacaac attcgccagt
     7801 aatacgccat tactgcgaac ggtgttgatt attttcgaat cggtgttata cgcgacgagt
     7861 gaacgcacat cggggttgag atcacccaac tcgtattcat cgcgttccga ccggatcgcc
     7921 tggatctcag ttaggccgag gtttgaatct gagaggatca agcccggata gatctgtttt
     7981 ccggtgcagt cgatcgtctt tgcatcacct gttgccacat tttttcctac gctggtgatc
     8041 tttccatttg aaaaaatgat cgttgcatca tcgatcacgt caccattacc aacatgtatt
     8101 gttgcatgcg ttaatgcaat agttcccgat tgcggaaccg cgggtaaaac atttggctgg
     8161 gaataggttt ttgtaacgat tagtatcaag agaaagcaac caatattttt catgtttcta
     8221 agtttgaaat gttcaccagt tcacgtgttc accagttcac gcgttcgtct taaattttga
     8281 accctttaat tctgtttttt gcaagtaatc gattaatttt tgcagcagca cgataacttc
     8341 ttttgcaaga ttataaagaa gctcgaattc atcctgttca ataaattttc tatccaatgc
     8401 ccgatataat tgagatctga attctccaca tgagccctta gagatgtata agaattgaat
     8461 aaactctttg ttgccagcgc gttcgaaacc ctctgcaata ttgtccatga ttgagcctgc
     8521 tgagccttcg acctgatcaa tcagtttgaa acttcttttg aacttaccag catcaatata
     8581 cccgccgata attcgattta gttctcttcc tttttgccag gaaaggatgt cttcaaaacg
     8641 tttgattgtg gccataaata ttatttgtct agttgataac gatttaaaaa aaagcctcgc
     8701 gacctcgtta acccgcgaac tcgtgaacta ctgaacttct tcctccgcat caaacgtgat
     8761 caatgctggc gtcgttttgg caccgctctt ttttgcagcg agcatttttt gaataagacg
     8821 atttcgctcc gccgcgatct gtacacgcaa tgttgaatcc cgttgcctgt cgtaataaac
     8881 aataccatca acaattgtct tttct
//
LOCUS       DASQJI010000833         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1208467,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000833 DASQJI010000000
VERSION     DASQJI010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208467"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1700)
                     /gene="rpoB"
                     /locus_tag="VEV83_21770"
     CDS             complement(<1..>1700)
                     /gene="rpoB"
                     /locus_tag="VEV83_21770"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HYK47827.1"
                     /translation="EYVDAKEIHVRYNRNDVDRLVSFEDDLQVYKLTKFIKTNQSTSI
                     ILRPGVRKGQVVKDGDFLTEGYATKDGELALGRNLQVAFMPWKGYNFEDAIVISERVV
                     RDDIFTSIHIDEFELEVRDTKLGEEELTPDIPNVSEEATKDLDEYGIIRIGAQVREGD
                     ILIGKITPKGESDPTPEEKLLRAIFGDKAGDAKDASLKAPNGTEGVVIDKKLFQRAKK
                     DKNGKVREKALLEKVEKVHDRNVEELKEVLLEKLQTLLKDRSSIGVTNNFGEMLIGKT
                     AKFNAKNLGSIDYQNVNPLGWTGDAQTDDRINTLLHNYNIKYNEELGRYKREKFNISI
                     GDELPAGVLKLAKVYLAVKRKLKVGDKMAGRHGNKGIVAKIVREEDMPFMEDGTPVDI
                     VLNPLGVPSRMNLGQIYETILGWVGKKMNVKFATPIFDGATTDEIAEYCDKASIPAMG
                     HTFLYDGETGERFHQKATVGVIYMIKLHHMVDDKMHARSIGPYSLITQQPLGGKAQFG
                     GQRFGEMEVWALEAYGAANILQELLTIKSDDIIGRAKTYEAIVKGDNISKAGVPESFN
                     V"
BASE COUNT          406 a          427 c          326 g          541 t
ORIGIN      
        1 acattgaagg actcgggcac acctgctttt gaaatattat caccctttac aatagcctca
       61 taagtttttg cgcggccgat aatatcatct gattttattg tcagcaattc ctgcagaatg
      121 tttgctgcac catacgcttc gagtgcccaa acttccattt caccgaagcg ctgtccaccg
      181 aactgagctt taccgcccaa aggttgttgt gtgatcaaac tgtaaggacc tatcgaacgt
      241 gcatgcatct tgtcatcaac catgtggtgg agcttgatca tatagatgac gccaacagtc
      301 gctttctgat ggaagcgttc gcctgtttcg ccatcataga gaaacgtgtg ccccatggca
      361 gggatgcttg ctttgtcgca atattcagcg atctcatcgg ttgtggcgcc atcaaagatt
      421 ggcgttgcaa atttcacatt catcttttta ccaacccaac caagaattgt ctcatagatc
      481 tgcccaagat tcatacggct tggtacaccc aacgggttca gcacgatatc aaccggcgtt
      541 ccatcttcca tgaaaggcat atcttcttca cgaacgatct ttgcaacgat gcctttgttt
      601 ccatggcgtc cggccatctt atcaccgact ttcagtttac gcttaacagc caggtaaacc
      661 tttgcgagtt tcaacacacc cgctggtaat tcatcaccaa tagagatatt gaatttttct
      721 cttttatacc ggccgagctc ttcgttatac ttaatgttat agttgtgaag cagcgtattg
      781 atgcgatcat cagtttgtgc atcgcctgtc catccaagtg gatttacatt ttgatagtcg
      841 atagagccga gattctttgc gttgaacttc gcggttttcc cgatcagcat ctcaccgaag
      901 ttattcgtaa caccaattga agacctgtct ttcaaaagtg tttgaagttt ttcaagcaaa
      961 acttctttta attcttcaac attacggtca tgtacttttt caaccttttc gagcaatgct
     1021 ttttcacgaa cttttccatt cttatctttc ttcgcgcgct ggaataactt tttatctatc
     1081 acgacgcctt cagttccgtt cggtgctttt agtgaagcat cttttgcatc acctgcttta
     1141 tcaccgaaga tcgcgcgtag caatttttct tccggcgtag gatcactttc tcctttcggt
     1201 gtgatcttcc cgatcaaaat atcaccttca cgaacctgcg caccgatgcg aataattcca
     1261 tattcgtcaa ggtctttcgt tgcttcctcg gaaacatttg gaatgtcagg cgttaactct
     1321 tcttcaccga gttttgtatc gcgaacttcc agttcaaatt catcgatgtg aatcgaagtg
     1381 aaaatatcat ctctcaccac cctttcactg ataacgatcg catcttcgaa gttgtaacct
     1441 ttccacggca tgaatgctac ctggaggtta cggccgagcg cgagttcccc gtctttcgtg
     1501 gcatagcctt cggttaagaa atcgccgtct tttacaacct gtccttttct aacaccagga
     1561 cgtaaaatga tcgaggtcga ttggttcgtt ttgatgaact tggttagctt gtaaacctgg
     1621 agatcatctt caaagctcac cagcctgtca acatcgttac gattgtagcg aacgtgaatt
     1681 tcttttgcat ccacgtattc
//
LOCUS       DASQJI010000834         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_594808,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000834 DASQJI010000000
VERSION     DASQJI010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594808"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VEV83_21775"
     CDS             <1..691
                     /locus_tag="VEV83_21775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47828.1"
                     /translation="IAFPLTFSLGAAFKRRERALQYISLFKASLQSVYYVFKDAKLDQ
                     EKKDEFENVARGMSEKLLDYLLTGAGSSSVQDLSHAVYNFVQANKEHLKRTFASKLFF
                     FLFRLNESIEFLIATKRHRTPWGVRTIVLVVIYSFVIMYPASLLHDVGFNVPLWYVVL
                     QTGVKGLIIISLYNVQTLLEDPFNQAGPDAIRVDDFRFSPVYTPEVATASAPIVETEA
                     GFEVDPLSDEE"
     gene            688..1707
                     /locus_tag="VEV83_21780"
     CDS             688..1707
                     /locus_tag="VEV83_21780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47829.1"
                     /translation="MKNIIVTLLYSLTSSCLLGQKDQLFIDRTPLNLALTMSIKEIAG
                     SKEDSTYISHMLYLKKADGSLDSIRCGLKGRGNYRLQNCFFPPLWIKMKKGDIKGTIF
                     EGNKKLKLVMPCDNAESHNDLILRESLCYRLYEVLTPYSFRTRLVNIDLTELRGKRRK
                     NFQVKGILIEDLDEVADRFDAKELKEARINSLAMNDTGALRFDLFQFMIANTDWSKSY
                     QHNSKLILHKTGYVSIPYDFDMSGLVDAPYAVVSVIGNEPLPISHVTERFYRGHCRSD
                     NVTAFVRNEFIAKEEAFLAVPAELKGELPDKELAGIVEFLSEFFVIAKDDKQFHDEVI
                     RNCRE"
BASE COUNT          546 a          419 c          486 g          540 t
ORIGIN      
        1 gatagcgttc ccgctaactt tctcgctcgg ggcagcgttt aaaaggagag aacgcgcttt
       61 gcagtacatc agtctcttca aagcgtcgct gcagtcggtg tattatgttt tcaaggatgc
      121 gaagctggac caggagaaaa aagatgagtt cgaaaatgtc gcaagaggca tgtcggaaaa
      181 actgctcgac tatcttctca cgggagcagg ctcgtcttca gttcaggatt tgtcgcacgc
      241 tgtttacaac ttcgtacaag ccaacaaaga gcatttgaaa cgaacgttcg cttcgaagct
      301 tttcttcttt ctcttccgct taaacgagag catcgaattt ttgatcgcca caaaaagaca
      361 ccgaactccg tggggtgtta ggactattgt cctggttgtg atctattcgt ttgtgatcat
      421 gtacccggcc tctttgcttc acgacgttgg gtttaatgtt ccgctgtggt atgttgttct
      481 gcaaacaggg gtgaagggtc ttatcatcat ctctctctac aatgttcaaa cattgctgga
      541 agatccgttc aaccaggccg gcccggatgc cattcgagtg gatgatttcc ggttctcgcc
      601 ggtgtacact ccggaggttg caaccgcatc tgcgcccatc gttgaaacgg aggccggttt
      661 cgaagttgac ccattaagcg atgaagaatg aaaaatatca tcgtcacact tctgtattcg
      721 cttaccagtt cttgcctgct cgggcaaaag gatcaattat tcattgacag gacgcctctc
      781 aatttggcac tgacgatgtc gatcaaagaa attgcgggta gtaaagagga ctctacctac
      841 atcagccata tgctttattt aaagaaagcg gatggtagtc ttgattcgat ccggtgcggt
      901 ttgaaaggca ggggcaatta caggctccaa aattgtttct tcccgccgtt gtggatcaaa
      961 atgaaaaaag gcgatatcaa agggacaatc tttgaaggga acaaaaagct gaagcttgtt
     1021 atgccatgcg ataatgccga aagccataac gatctcatct taagagagtc gctgtgctac
     1081 cggctttacg aagttttgac tccttactca ttcagaacac gtttggtgaa tatcgatctc
     1141 actgagctgc gcggcaaaag acgcaaaaat ttccaggtga agggtatatt gatcgaggac
     1201 cttgatgaag tcgccgatcg ttttgacgca aaggaattaa aagaggcacg gataaattcg
     1261 ctggctatga atgacacggg cgcattgcgt ttcgatcttt tccagttcat gatagcaaat
     1321 actgattggt cgaaaagcta ccagcacaac agcaagttga tccttcataa aaccggttat
     1381 gtttccattc cttacgattt tgatatgagt ggattggtag atgcgcccta cgcagtagtt
     1441 tctgtgatcg gcaatgagcc gctcccgatc tcgcatgtta cggaacgttt ttaccgtggg
     1501 cattgccgca gcgataacgt tacagccttt gtgagaaacg aattcattgc gaaagaagag
     1561 gcctttttag ctgtgcctgc tgaattaaaa ggagaactgc cggacaaaga acttgcgggt
     1621 atcgtggaat ttctcagtga attttttgtg atagcaaaag atgataagca gttccatgac
     1681 gaggtgataa gaaattgccg cgaataatta gcagaacagg tgttgagggt taatctaaat
     1741 gagaggggcc tttatcaaat ttgatgttca ccctgcataa actttcttac cgtcgcccct
     1801 gttaaatgaa gcgacaaaaa aatggagagc gaaaaatcgt gcgtcagcgc acgatgttgc
     1861 aaccggaatt ttgaattgaa tataatagtt tcggagtttg caacttgcag ccaaaacaat
     1921 ctccgtttaa cggttacatg gtgagaatgg gcaatctaat gcgccacgag gcggtttcat
     1981 ggtaaataac t
//
LOCUS       DASQJI010000835         6197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1209663,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000835 DASQJI010000000
VERSION     DASQJI010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6197
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209663"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VEV83_21785"
     CDS             complement(<1..383)
                     /locus_tag="VEV83_21785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK47830.1"
                     /translation="MQTIYCLSGLGANEKVFQFLDLSFAKPVFIQWLPPRQNETLRQY
                     ALRLKEEFITEPEPVIFGLSLGGMMAVEIAKVIPSATAILISSAKTRKEIPFYLRMLL
                     STPVYKMVPEKVVRRSKKIQSYFLGA"
     gene            complement(461..976)
                     /locus_tag="VEV83_21790"
     CDS             complement(461..976)
                     /locus_tag="VEV83_21790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47831.1"
                     /translation="MKKFITVSMIAFVLLCSINGHTQRTPEDLAIITFYCFQEHNLDS
                     FYRLIPTVNEIRDAGATAGVDTNSASFKEFVTQYPSFVDQFKQQCAAIENDSTRLHFS
                     WTNSNLDSIEISERNIPLDNKDPNSKTVVVTVLDIYFRSNSHLLRLTLGDANKYNGLW
                     KPGNRIALSKL"
     gene            complement(987..2264)
                     /gene="tyrS"
                     /locus_tag="VEV83_21795"
     CDS             complement(987..2264)
                     /gene="tyrS"
                     /locus_tag="VEV83_21795"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HYK47832.1"
                     /translation="MNLIEELRWRGLIQDIMPGTEEQLNKEMTSAYIGFDPTADSLHI
                     GSLVPILLLVHLQRAGHKPYALVGGATGMVGDPSGKSEERNLLSEEVLQHNQAGVKKQ
                     LERFLDFDPAKLNHAVMVNNYDWFKNMFFLEFIRDVGKHITVNYMMAKDSVKRRIEGE
                     TGLSFTEFTYQLVQGYDFYWLYTHHNCKMQMGGSDQWGNITTGTELIRRKAGGEAFAF
                     TCPLLTKADGGKFGKTEQGNIWLDAARTSPYQFYQFWLNASDDDAKKWILIFTFLPAN
                     EIEQLIAGHDADPSKRILQKTLAKEITSFVHGEEALRQALQTTEKLFADQQGAVENLS
                     EQDLESMEGVVKMNYPLSKLDPAVDVVSFLAETNIFPSKGEARKMIQNGGVSINRKKV
                     PGFEFPVSAELLLHDKYILVQKGKKNYYLVKVN"
     gene            complement(2351..3148)
                     /locus_tag="VEV83_21800"
     CDS             complement(2351..3148)
                     /locus_tag="VEV83_21800"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HYK47833.1"
                     /translation="MTTIQAIVLAVVEGITEFLPISSTGHMIIASSLMGIASDDFTKL
                     FEVAIQLGAIVSVIVLYWRRFFPLNKWNFYFKLIVAVIPALILGFLFKDKIDELLEKP
                     TPVAISFLVGGIVLLFIDNIFRRNTIDREKEISYGKGFIIGIWQCLSLMPGVSRSAAS
                     IIGGMQQKLTRRLAAEFSFFLAVPTMTAATAAKFWDTYQLNPAIITDTNNIKLLLIGA
                     FIAFIVAMLAIKFFISYLQRYGFKLFGVYRILAGIVLLILIWRGILV"
     gene            complement(3223..3543)
                     /locus_tag="VEV83_21805"
     CDS             complement(3223..3543)
                     /locus_tag="VEV83_21805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014223070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3098 domain-containing protein"
                     /protein_id="HYK47834.1"
                     /translation="MAEIKKQVAPVKQTAPARPAGPVRKQAEPAPAIFTKDNYKWMAI
                     GGAIIILGLVLMSGGKNTDPNTFDPKVVYSTTRITVAPILIVAGLLVEIYAIFRKTKT
                     QSNA"
     gene            complement(3790..4662)
                     /locus_tag="VEV83_21810"
     CDS             complement(3790..4662)
                     /locus_tag="VEV83_21810"
                     /inference="COORDINATES: protein motif:HMM:NF037183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HYK47835.1"
                     /translation="MAVKTKSLRRSKPNYIYSIVGVALVLLILGIMGWLFLNLAQAGN
                     AFKEDIRISAYLRTRNKDSVAQIQQYIASQPYAKNVEYVDKSKAKEIWNKDNNEDWNK
                     ILDFNPLPESIDFYARANYVNKDSLDKISANIMTLYGNQITDLQYPSSLVNNLNERAS
                     KLGLIFLVVAVVLCVIVIVSIDTTIRLAMFSNRFLIKTMQMVGATRGFISRPMDFRAV
                     VNGIISAGIAIAILFTLIEWAESQFPQLKAIHNNALTVTLFGGLLLIGVSISVFSTHR
                     SVIKYLRMKLDDLY"
     gene            complement(4831..4968)
                     /locus_tag="VEV83_21815"
     CDS             complement(4831..4968)
                     /locus_tag="VEV83_21815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47836.1"
                     /translation="MKNSQLDATGYAAQVCDARNDAQRIFAGYKKNFHIAAILSLPYN
                     R"
     gene            5037..>6197
                     /locus_tag="VEV83_21820"
     CDS             5037..>6197
                     /locus_tag="VEV83_21820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HYK47837.1"
                     /translation="MEYNFREIEKKWQDWWKANEVYKVSNPPGTDKPKYYVLDMFPYP
                     SGAGLHVGHPLGYIASDIYARFKRLKGFNVLHPMGYDAFGLPAEQYAIEHGIHPAIST
                     EQNINNFRSQLEKIGFCFDWDREVRTNDPSFYKWTQWIFLQLFKSYFNRQTKKAESID
                     SLVAAFEREGNQYYPIPDASYRLPVTGDRQPVTGNTFTSDEWSAFDFFTQQSILMEYR
                     LAYCGFGEVNWCEALGTVLANDEVINGVSERGGFPVVKKKLRQWYLRITEYADRLLEG
                     LETVDFSEAMKEMQTNWIGKSYGAEIDFKIVDAEEILRVFTTRPDTIFGVDFMVIAPE
                     HELVEKITTEEHKEEVEKYLTWVNSRSERERMAEKQISGVFTGAYAMNPFDHR"
BASE COUNT         1688 a         1387 c         1391 g         1731 t
ORIGIN      
        1 gctcccagga aatacgattg aatttttttc gatcggcgaa ccactttctc aggaaccatt
       61 ttgtataccg gcgtggacaa cagcattcgc aagtaaaaag gaatttcctt tcttgttttc
      121 gcgcttgaga tgaggatagc ggtggcagat gggatcactt ttgcaatttc aacggccatc
      181 ataccgccca gggataaacc aaaaatgacc ggctcaggct cggtaataaa ttcttctttt
      241 aagcgcaatg catattggcg aagcgtttcg ttttggcgcg gtggaagcca ttggatgaag
      301 acgggttttg caaaagaaag gtcaaggaat tgaaacactt tttcattcgc tccaaggccg
      361 gataaacaat agatagtttg cattctcaat tctgtttatc attcaacaca acacgcaatg
      421 taggcaatct ttttaagagg caatgctgct tgctggccgt tcacagtttc gaaagcgcaa
      481 tcctgtttcc gggtttccaa agaccgttgt atttattcgc atcacccagc gtaagtctca
      541 gcaagtgact gttcgatcta aagtatatgt cgaggaccgt aaccacaacc gttttgctgt
      601 taggatcttt gttatccagc gggatgttcc tttccgatat ttcaatactg tcgaggttgg
      661 aatttgtcca gctaaaatgc agtctcgtgg agtcattttc gattgccgca cattgctgtt
      721 taaattgatc gacaaaagac gggtattgtg ttacaaactc tttgaagctg gcggagtttg
      781 tgtcaactcc tgctgtggcg cccgcatccc ggatctcgtt aacggtgggg atgagccgat
      841 aaaagctgtc gaggttatgt tcctggaaac agtagaaagt gatgatggca agatcttccg
      901 gagttcgctg cgtatgacca ttgatagagc acaataacac gaaagcgatc atcgatactg
      961 taataaactt cttcataaca gtgggcttaa ttaactttca ccaaatagta attctttttc
     1021 cccttttgca caaggatgta tttgtcatgc aagagcaact cagcggagac cgggaactcg
     1081 aaaccaggca cctttttcct gttaatgctt acgcctccat tttgtatcat ctttcttgct
     1141 tcgcctttac taggaaaaat atttgtttcc gcaagaaaag agaccacatc gactgcagga
     1201 tcgagcttcg ataacggata attcattttt actacgccct ccattgattc aaggtcctgt
     1261 tcactcaaat tttcgacggc gccctgttga tcggcgaata atttctctgt tgtttggagg
     1321 gcttgccgca acgcttcttc tccatgcacg aacgacgtaa tttcttttgc cagcgttttc
     1381 tgcaatatcc gctttgacgg gtccgcatcg tgcccggcta tcaattgctc aatctcgttt
     1441 gcaggtaaga acgtaaatat caggatccat ttcttcgcat catcgtccga agcatttagc
     1501 cagaactggt agaattggta aggcgaggtt cgcgcggcat ccagccaaat attaccctgt
     1561 tccgtcttac caaacttgcc tccgtcagct ttcgttaaca acgggcacgt aaatgcaaag
     1621 gcttcgccgc ccgctttcct gcgaatcagt tctgttcctg ttgtaatgtt accccattga
     1681 tcactgccgc ccatttgcat tttgcagtta tgatgagtat acagccaata gaagtcatag
     1741 ccctgtacca gttggtatgt gaattcggta aaactgaggc ccgtctcgcc ttcgatcctt
     1801 cttttcacgc tgtctttcgc catcatataa tttacggtga tgtgcttgcc cacatctcga
     1861 ataaattcta gaaaaaacat attcttaaac cagtcataat tgttcaccat cactgcatgg
     1921 ttcagtttcg cgggatcaaa atccaggaat cgttcaagct gcttctttac acctgcctgg
     1981 ttatgttgca gcacttcttc actcaaaaga ttacgttctt cacttttgcc gctcgggtca
     2041 ccaaccatcc ccgtcgctcc gccgacaagt gcatacggtt tgtgaccagc cctttgcaaa
     2101 tggactaaca ataatatagg aacgaggctt ccaatgtgga ggctgtcggc tgtgggatca
     2161 aaaccaatat atgctgacgt catttccttg ttcaattgct cttccgttcc cggcattata
     2221 tcttgtatca gtccgcgcca gcgtagctct tcgatcaggt tcattcgatc agatttttgc
     2281 aaaagtaaga ggatgtcagt ttcaggttgc aggttgcagg ctgcaggctg cgaagaactg
     2341 cgctattcat ttaaaccaaa attcctctcc agataagaat gagcaaaacg atccctgcaa
     2401 gaatgcgata gactccaaac aacttaaacc cgtatcgctg taagtaggaa ataaagaatt
     2461 ttatggcaag catggcgaca atgaaagcaa tgaaggcgcc gatcaaaagc aatttgatat
     2521 tattcgtgtc agtaatgatc gcgggattca gctgataagt atcccaaaat ttagcagcag
     2581 tggcagccgt catcgttgga acagccagga agaaagaaaa ttccgcggcg agcctacggg
     2641 taagtttttg ctgcatgccc ccaataatgc ttgcagcgct tctgcttacg ccgggcatca
     2701 gcgaaaggca ttgccatatc ccgatgataa aacctttgcc ataagagatt tccttttcac
     2761 gatcgattgt attacgacgg aaaatattgt cgataaacaa caatacgatg ccaccaacta
     2821 agaaactgat agcaactggt gttggctttt ccagcagttc atcaattttg tctttgaaca
     2881 gaaagcctaa aatgagtgca ggtattacag caacgataag cttaaaataa aaattccatt
     2941 tattgagagg gaaaaacctt ctccagtaca atacaatcac cgaaacaata gcaccgagct
     3001 ggatagctac ttcaaaaagt tttgtaaagt catcggaggc gatgcccatc agcgaacttg
     3061 caatgatcat atggccagtg gacgatattg gaagaaattc agtgatgcct tctacaactg
     3121 caagaacgat cgcctggata gtggtcatta aactcgtatt agtttacgtc aatcagtatt
     3181 tggtataaaa agaaaagcgg cgctgtgcac cgctaaaatt tcttatgcgt tcgattgcgt
     3241 ctttgtcttc cgaaagatcg cgtagatctc taccagcaaa ccagctacga tcaggatcgg
     3301 tgcaaccgta atgcgggttg tgctgtacac caccttggga tcaaaagtgt ttggatcagt
     3361 atttttccct ccactcatta ataccagtcc caaaatgatg atcgctccgc cgatcgccat
     3421 ccatttgtag ttatcttttg taaatatagc cggcgcaggt tcagcttgtt ttcttacagg
     3481 gcctgcgggc ctggcgggcg ccgtttgttt aaccggagca acttgttttt tgatttcagc
     3541 catagttttt ataaaaagtg gtgcaagata gggaaattgt gaatccttgt gaattgtcaa
     3601 ttgtgaattg tgaatgagca tttgaaattc agggcgtcct agcagtccga acggcggaat
     3661 tatgaaagag tcttaagcac tttataggat tagtaattaa tctcttcccg attgatccgg
     3721 ccactcgcac catgtatacg tcgcagcaat taattaaacg tcaattcacc attcacaatt
     3781 gaccattcac taatacaagt catccagctt catcctcaag tactttatta cgctgcggtg
     3841 tgtactgaag accgaaatgc ttactccaat cagcaagagc ccgccaaata aagtaactgt
     3901 cagcgcattg ttgtgtatag ccttcaactg cgggaactgg ctttcggccc attcgatcag
     3961 cgtaaataaa atggcgatcg caatgccagc gctgatgata ccgtttacaa ccgccctgaa
     4021 atccatgggc cgggagataa aaccgcgcgt cgctccaacc atttgcatcg tcttgataag
     4081 gaacctgttg ctgaacattg ccaaacggat cgtggtatca atactcacga tgacgataac
     4141 gcaaagcaca accgcaacta caagaaatat caatccaagc tttgaagcac gctcattcag
     4201 attatttacc aggcttgacg ggtattgaag gtcggttatc tggttgccgt acaaagtcat
     4261 gatgttcgcc gagatcttgt caaggctgtc tttgttcaca taattagcac gcgcataaaa
     4321 atcgatgctc tccggcagcg ggttgaagtc gaggatctta ttccagtctt cattgttgtc
     4381 tttgttccat atttcttttg cctttgactt gtccacatat tcgacatttt ttgcgtaagg
     4441 ttgcgaagcg atatactgtt ggatctgcgc cacactgtcc ttattcctgg tacggagata
     4501 agcgctgatg cggatgtctt ctttaaaagc gttccccgcc tgcgcaaggt ttagaaatag
     4561 ccaacccatt atcccgagga tcagcagaac gagcgcaaca ccaacgatgc tgtatatata
     4621 atttggtttg ctgcgtcgaa gcgatttggt tttaactgcc ataataataa acgcgtttca
     4681 gcgcgaacaa atttagaggt ttcgtttaca atatttattg tgtgcccggg attttaaaag
     4741 gccttctgcg aactttgcat cactataaca ttttcgcagc ggctcggcat tcatcgcagt
     4801 ttggcttttt cccgtaggtt tgcaatcctt ctaacgatta tatggcaggc taagtatggc
     4861 tgctatgtga aaattttttt tgtagccggc aaagatcctt tgggcatcgt tccttgcgtc
     4921 gcacacttgt gctgcataac ctgtggcatc cagttgtgaa tttttcaaca cttcgtgttc
     4981 agagtttcat tgcccgcgga aatcgtaaat caaaaatcgt aaccgtaaat tgagtcatgg
     5041 aatataattt cagagagata gaaaagaaat ggcaggattg gtggaaggca aatgaagttt
     5101 ataaagtcag caatccgccc gggaccgaca aaccgaaata ttatgtgctg gatatgttcc
     5161 cctatccaag cggcgccggt ttgcatgtag gccatccgct gggttatatc gcaagtgata
     5221 tttatgcgcg cttcaaacgg ttaaagggtt tcaatgtgct gcacccgatg ggttatgatg
     5281 cgtttgggtt acctgcagaa caatatgcta tcgaacatgg tattcacccg gccatttcca
     5341 ccgaacaaaa cataaataac tttcgcagcc agctagaaaa gattggtttc tgtttcgact
     5401 gggaccgcga agtaagaaca aacgatcctt ccttttacaa atggacgcag tggatattcc
     5461 ttcaactatt caagtcatat ttcaacaggc aaacaaaaaa ggcggaaagt attgactcgt
     5521 tggttgcagc gtttgaaaga gaaggaaatc agtattaccc aataccagat gccagttaca
     5581 ggttgccagt taccggtgat cggcaaccgg tgaccggcaa cactttcacc tcggacgaat
     5641 ggagcgcatt cgactttttt acgcagcaaa gtatcctcat ggaataccgt ctcgcctatt
     5701 gcggattcgg agaagtgaat tggtgtgaag cacttggtac cgttcttgcc aatgacgaag
     5761 taattaatgg cgttagtgaa cgtggcggtt tccctgtggt gaaaaagaaa ttgcgtcaat
     5821 ggtacctccg tatcactgaa tatgccgaca ggctgctgga aggtttggag acggtggact
     5881 ttagcgaggc gatgaaggaa atgcaaacga actggatcgg caaaagttat ggagccgaaa
     5941 ttgattttaa aattgtagat gccgaagaaa tattaagagt attcacgacg cggccggaca
     6001 cgatttttgg cgtcgacttc atggtgatcg cgcccgagca tgagttggtt gaaaagatca
     6061 cgacggaaga acataaagaa gaagtggaaa aatatttgac gtgggtaaac agccgcagtg
     6121 agcgcgagcg gatggcagaa aagcagatca gtggagtttt caccggcgcc tacgctatga
     6181 acccgtttga ccacagg
//
LOCUS       DASQJI010000836         4994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1519431,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000836 DASQJI010000000
VERSION     DASQJI010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4994
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1519431"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..3189
                     /locus_tag="VEV83_21825"
     CDS             151..3189
                     /locus_tag="VEV83_21825"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK47838.1"
                     /translation="MRILCSMVALFLVVNVYAQNRTITGRVTDQGTLPVPNASVIAKG
                     TTLGVTTDSAGSFSITVPASVTTLLISSLNFTQKEVNISGTTTVTVSLQPSTSNLAEV
                     VVVAYGVQRKTNVTGSIATVKGSQLAGKPFTSIDKTLQGLAPGVQTTSASGAPGSATN
                     VRIRGIGSINASAAPLWVIDGAIATIGDLTSNTTTANALSGLNPDDIESISILKDAAA
                     TSIYGSRAANGVIIVTTKKGKPGKTVLNVSAETGSNNIAYFNDKNKSLNSVQNQELLR
                     ESLINAGYAADNDEADYLIENALGIPKDYTKTNTDWYNVVTQTGNQSQFNVSLSGGNE
                     KTQFYTSAGYLDQVGTVITSDFKRYNGSISLTHKPNTKFTLTTGINGSYSRQHTPTNS
                     GNFSNPVIGSYFLVPWYSPYNDDGSLRYGDNDPDGQFPANGGPYNPVAVAELDNSVAK
                     QIQLRGYLSGEYSIIPELKFTSRYSAEYLTIPEDSYLNPFYGDGYNYNGLAFATNRRV
                     FDWTWTNLLDFRHALNQEKDFYFDVMGGYESQYYNNFFMQAGGQNFPGDLRLKYLASA
                     AKPITATSVPNENSTVSYLSNLTVNYEDRFVLTGSFRRDGSSVFGSNNRWGNFFSVGG
                     TWNLSEEKFLKDNSLISLLKIRASYGENGNALGFGDYQSLATYGFGFNYAGSPGSAPN
                     NIGDSNLTWEKNKITNVGFDFALLNNRIYGSFDFYDRKTSNLLVNVPLSGTSGFTSQL
                     LNVGSIQNRGYEITVGGKPFANRDFSWDVQFMLAHNKNKVLDLYNDAPIANGLFNITE
                     GHDVQEFYLPLWAGVDPDNGDPLWYTDGSSKESTNDINKAPYTLTGKSASPTYFGSFT
                     NTVTYKGISLSAMLYYNFGNYVYDIWDTYAMSDGAYLGFLNQFTNELNRWQKPGDITQ
                     VPKIIFGGNLSSNSPSTRYLYNGDYIRLRDIQLGYTLPSSLIQRWNIASVSVYLRGTN
                     LFTWVKDDLLPLDPETGIQSTNDFDVFIPKTITAGIKVGF"
     gene            3215..4621
                     /locus_tag="VEV83_21830"
     CDS             3215..4621
                     /locus_tag="VEV83_21830"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HYK47839.1"
                     /translation="MKKQMNKIALLFSILSLIFFSCSKSFTDRDPFDRVPTPTAITDE
                     ASMQTALNGAYAGLRDIGVYGRDWPVIGDLQADNAFLEVQNSGRYIPQYQYNFTATDA
                     TYTEMWNAAYTVILRANTIIDADIPGDNVNALKAQAYALRALMYFKLVTTYARPYTDD
                     PSLPGVPIVLHYDPYIQPARNTVAQVYDQIVSDFTTAFNNAPDYTNSVTLSKYAIEGL
                     LARTYLYMGNNAAAKQAAEDVINNSEFSLVSAKDYADFWAEPGIHTDAVEVMFEVDVD
                     IINNLGSDDFGGFYAGIYQDLYASEDLYNLYSPTDVRTSVLIPYYTKAGTPAVIVYKY
                     QNANNTADRDNIKVIRLSEVYLIAAEASWPDDEDAARLYLNAVAEARDPSFGGYNSSG
                     AALLEDIITERRKELAFEGDRYYDLNRLKRDVNRFDNPGAIPGPLLIPYTDYHRIAPI
                     PQSELQANPNIEQNPGYQ"
BASE COUNT         1390 a         1166 c         1138 g         1300 t
ORIGIN      
        1 ttgcgaatcc tgttcgaggc attcaatttc cggcttcggt ttttacgatg gttactcaaa
       61 tcagctaata caattttctg cttgtccata acaatggcct ttcattgcac ggccacgcat
      121 tctccgtttt taaacccatc aaacgttttt atgagaatac tatgttcaat ggttgcattg
      181 tttttggttg taaatgtgta cgcgcaaaac cgtaccatca ccgggagagt aactgatcaa
      241 ggcacattgc ctgtaccgaa cgccagtgtg atcgccaaag gcacgacact tggtgttacc
      301 accgattcgg ctggatcatt ctctatcacc gttcccgctt cggtaaccac cctcctgata
      361 tcgtccttaa actttacgca aaaggaagtg aatatctcag gcacgaccac cgtgacggta
      421 agcctgcagc catcaacgag taaccttgcc gaagttgttg tggtagctta cggcgtccaa
      481 agaaaaacaa atgttaccgg ctcgatagct accgttaaag gcagccaact tgcaggcaaa
      541 ccgttcactt cgatcgacaa gaccttgcag gggctggcgc cgggtgtaca aaccacatca
      601 gcgtcgggcg cgcccggttc tgccaccaac gtacgcatac gcggcatcgg ttccatcaac
      661 gcgagtgcag cgcctttatg ggtgattgat ggtgctattg caaccatcgg cgaccttacg
      721 tccaatacca ccaccgcaaa tgctttaagc ggtttgaacc ctgatgacat tgaaagcata
      781 agtatattga aagatgcggc cgccacttct atatacgggt caagagccgc aaacggtgtg
      841 atcatcgtaa cgactaaaaa aggcaagccc ggtaaaactg ttttgaatgt ttctgcggaa
      901 accggttcga ataatatcgc ttatttcaac gacaaaaaca aaagcctcaa cagtgttcaa
      961 aaccaggaat tgcttcgcga atcgctgatc aatgcaggat atgctgccga taatgacgaa
     1021 gcagattatc ttatcgaaaa tgcattgggc attccgaaag attacacaaa aacaaatacc
     1081 gactggtata atgtggttac acaaacaggc aaccagtcgc agttcaatgt tagcctgagc
     1141 ggtggaaatg agaaaacgca attttatact tcagccggct atctcgacca ggttggcacc
     1201 gtgataacgt ctgactttaa gcgttataac ggaagtattt cattaacgca taagcctaac
     1261 acaaaattca ccctcaccac cggcatcaat ggaagctaca gcaggcagca cacgccaacc
     1321 aacagtggca atttcagcaa ccccgtgatc gggtcttatt tcctggtgcc ctggtatagt
     1381 ccttataacg atgacggctc attaaggtat ggcgataacg acccggatgg acagttccca
     1441 gccaacggag gaccttataa tcccgttgcc gttgcggaac tcgacaacag tgttgcaaag
     1501 cagatccagt tgcgcggcta tctttccggc gaatattcca ttatccccga attaaagttt
     1561 acaagccgtt acagcgctga gtatttaacc atacctgaag attcttacct gaaccctttt
     1621 tacggtgatg gctacaacta caacgggctt gcttttgcaa caaaccggcg tgtgttcgac
     1681 tggacttgga ctaacctgct tgacttcagg catgcgctga accaggagaa ggatttttat
     1741 tttgatgtga tgggtggtta cgaatcgcag tactataaca acttctttat gcaggccggc
     1801 ggacaaaatt ttcctggcga tctccgctta aaatatctgg cgtccgcagc caaaccgatc
     1861 accgcaacat cggtgcccaa tgaaaactct accgtttctt atctctcgaa tcttactgta
     1921 aattatgaag acaggtttgt gcttacaggg agttttcgca gagacggttc atctgtgttt
     1981 ggatcgaata accgctgggg caactttttc tccgttggtg gcacatggaa cctgagtgaa
     2041 gaaaagtttt tgaaggataa cagccttatc agcctgctca agataagggc atcgtatgga
     2101 gaaaacggca acgcacttgg ttttggagat tatcaatccc tcgctactta tggtttcggc
     2161 tttaattacg caggctctcc gggcagcgca cccaataata tcggcgacag caatctcacc
     2221 tgggaaaaaa ataaaataac caacgttggg ttcgattttg cattgctcaa taacaggatc
     2281 tatggcagct ttgattttta cgacaggaaa acttctaacc tcctggtgaa tgtacctctt
     2341 tcggggactt caggctttac aagccagttg ctgaatgtgg gaagtattca gaacaggggt
     2401 tatgaaatta cagtcggcgg aaagcccttt gcgaacaggg atttttcatg ggacgtacag
     2461 tttatgctgg cgcacaataa gaataaagtg ctggacctgt acaatgatgc tcctattgca
     2521 aacgggttat tcaatattac ggaaggccat gacgtgcagg aattttacct gcctttgtgg
     2581 gcgggcgtag atccggataa cggtgacccg ctttggtaca ccgacggatc atcgaaggaa
     2641 tctacaaacg acatcaacaa ggctccatac acattaacag ggaagtcggc atcgccaacc
     2701 tactttggat cgtttacaaa cacggtcact tataaaggca tttccctttc agcgatgttg
     2761 tattacaact ttggaaatta tgtatacgac atctgggata catacgcaat gagcgacggt
     2821 gcgtacctcg gtttcttaaa ccagttcact aatgagttga accgctggca aaaacccggt
     2881 gatatcacac aggtcccgaa gatcatcttc ggcggtaacc tgagttcaaa ttcgccgtca
     2941 acacgttacc tgtataacgg agattacata aggttgcgtg atatacagtt aggatataca
     3001 ctgccttcat cacttataca aagatggaat attgcaagcg tttctgttta cctgcgtggc
     3061 accaacctgt ttacctgggt gaaagatgac ctgttgccgc tcgaccccga aacaggcatt
     3121 caaagcacaa acgactttga tgtgtttatc ccgaaaacaa taacagcagg tattaaagtt
     3181 ggtttttaat ctaacccaaa caaaaaatta ccagatgaaa aagcaaatga ataagatcgc
     3241 gcttcttttc agtattcttt ctcttatatt tttttcgtgt tctaaaagtt ttacagacag
     3301 agacccgttc gaccgtgtgc cgacgcccac agccatcacc gatgaagctt ccatgcaaac
     3361 tgcattgaat ggcgcttatg ccggtctccg ggacataggc gtatatggtc gcgactggcc
     3421 ggtcatcggc gacctgcagg cagataacgc ttttctcgaa gtacaaaatt ccggacgata
     3481 cattccgcaa tatcaataca acttcacggc caccgatgcc acttacactg aaatgtggaa
     3541 cgccgcgtat accgtgatcc tgcgcgctaa tacgatcatt gatgcggaca ttccgggcga
     3601 taatgtaaac gcactgaaag cgcaggcgta tgccttaaga gcgctgatgt attttaaact
     3661 ggttaccacg tatgcccggc cttataccga tgacccaagc ctgcccggcg ttcctatcgt
     3721 tttacattat gacccttata ttcagccggc ccgtaatacg gtggcgcagg tatatgacca
     3781 gatcgtaagc gatttcacca ctgcatttaa taatgccccg gattacacga actctgttac
     3841 cttaagcaaa tacgcgatcg aaggattgct ggcaagaact tacctgtaca tgggcaataa
     3901 cgctgccgca aaacaagcag cagaagatgt aataaataac agcgaatttt cgctggtaag
     3961 tgcaaaagac tacgctgatt tctgggcaga accgggtatt catactgatg cggtggaagt
     4021 gatgtttgaa gtggacgttg atatcatcaa taatcttggc agtgacgatt ttggtggctt
     4081 ctatgcaggc atttaccagg acctgtatgc atctgaagac ctgtataatt tgtatagccc
     4141 caccgatgtg cgtacatctg tgctgatacc ttattataca aaggcaggca cgcccgccgt
     4201 aatagtttat aaataccaga atgcgaacaa cacagcggac agggacaata taaaagtcat
     4261 ccggctttca gaagtgtatt tgatcgcggc cgaagcatcg tggcctgatg acgaggatgc
     4321 tgcacgttta tacctgaacg ctgttgccga ggcaagagac ccttcttttg gtggttacaa
     4381 ctccagtggt gcggcgttgc tggaagatat tattactgaa agaagaaagg agcttgcgtt
     4441 tgaaggcgac cgctattatg acctcaaccg tctgaaaaga gatgttaacc ggttcgacaa
     4501 ccccggcgcc attcccggtc cgttgttgat accttataca gattatcaca ggatcgcccc
     4561 gataccgcaa tcagagttgc aggccaatcc gaatattgaa caaaacccgg gctatcaata
     4621 aaaaatttag ttgtttgatc attgaaccgc ccgtgttata agcaggcggt tttttttatg
     4681 gcatgttacc ggtaaatgaa acgaaacggt gacgctgtaa aatttttttt gaaaggaatg
     4741 gcaagtcggc aattatttta atttattttt tcaccgtcat acccgaacgg tggcttaata
     4801 gatccggaat gccaatgatc gggtatctct tagaatttcg gatgttggat tgtggattgc
     4861 aacagttgct aaatacaatg tcgcctatta caagaaattc tttcgttata taatgctccg
     4921 tagacgggga tttccgcttt ccccgttaag gagggacaag ctgcgggaat gacgttgcga
     4981 gggttcagtt ttga
//
LOCUS       DASQJI010000837         6027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3053127,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000837 DASQJI010000000
VERSION     DASQJI010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3053127"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1947)
                     /locus_tag="VEV83_21835"
     CDS             complement(<1..1947)
                     /locus_tag="VEV83_21835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HYK47840.1"
                     /translation="MHDYLKGLNEPQREAATHINGPLMIVAGAGSGKTKVLTTRIAHL
                     MANGVDSFNILALTFTNKAAAEMKERVERTLGNTEARNLYIGTFHSVFARILRSEAPR
                     LGYPNNFTIYDTDDSRSVIKTVVHELLLDDKLYKANVVHNRISAAKNALVGPDEYAND
                     YYIQQEDMRTNRPALAQVYKAYQARCFKNGAMDFDDLLFKMYELLRDFPAVLHKYQHK
                     FKYILIDEYQDTNPVQYQITKLLAAVHENICVVGDDAQSIYSFRGATIENILQFQKDY
                     DDVKVIKLEQNYRSTQSILNVANEVIKNNKGQLPKVLWTENAQGEKIKLVRTMTDNDE
                     GKYIADTIKEQKLRNHFYNKDFAVLYRTNAQSRAFEENLRRMGIGYRIFGGVSFYQRK
                     EIKDFLGYLRVIVNTRDEEALRRIINYPGRGIGKTSVEKIVIAANEQRITFWEVLTRA
                     GEFGFKAGTLEAIQNFVTMIRYFQSMLQEKNAYDVAVQVGKHTNFIKELFNDKSTEGL
                     ARYENVQELLNSIKEWTESPSNEEGEVGDKRLGAYLQQITLLTDADEGDDRADVVKMM
                     TIHSAKGLEFPVVFVAGLEETLFPNAMSINTREELEEERRLFYVAVTRAQKHLHLTYA
                     NARYRFGSLVQNEPSRFLEELPEAF"
     gene            2090..2407
                     /locus_tag="VEV83_21840"
     CDS             2090..2407
                     /locus_tag="VEV83_21840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47841.1"
                     /translation="MKTNSTQQEILLMTNTSFAQRQWCEKDNERKNLTPQEQFEEACA
                     NGLIQELLPEVFEAPDNKRLYLWQMRPGFSFVQLEVGEFPIAPEKEFSIDPHNFLPAT
                     WYN"
     gene            complement(2490..3272)
                     /locus_tag="VEV83_21845"
     CDS             complement(2490..3272)
                     /locus_tag="VEV83_21845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47842.1"
                     /translation="MRKAFTAVALLLFACNQPTEKKFLQMPDLEQQNLKGNITRIETT
                     TYTVDSTGKMGAMDTCCNYVQEFDANGFSSRYESKDSKGKVTSEQLYTHSDDGLFTGM
                     TTMENNKTASSMTVDIDKDRKYSVAKMLDSTGKITSYFDSITTNEFGQITGGTEHRPD
                     GSFKGSFASTYQSHFFVGNESKDSTGKVAYRSNAKLNDKNEQEQLTETNFGKDSATTT
                     VTTYKYSDWDDHGNWLQQTTYNDKGKATKIIRRTIAYAADKK"
     gene            3430..5898
                     /locus_tag="VEV83_21850"
     CDS             3430..5898
                     /locus_tag="VEV83_21850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HYK47843.1"
                     /translation="MNASGENLLVVPASDKTLEESALEYLQFKYFPAYARFLLENNVQ
                     QLVEEQLRLSRILNLPLLKFFESSGEAEMIKLGTETLTELLEYCADNRAKEYITLSLK
                     RWIANQLPVVTRHQVVAEDITTLSLVRRRSFRHMLPLYTSDLDLYINVMDELDRFTAE
                     LDSLSFKTLLSINKDISEQVQALGHIGNWQWDLRTHRLSWSNELYRIYELEPESSITS
                     EKIASYNHPEDGERVNNIMQLSQETCSPHDFYYRIILKDQKIKILHARGQVRLDDNGE
                     PFEMFGTLQDVTSQKLNEEELSEKTKFIQKITDVTPCLIAVYNVKTGKYAFINNALQT
                     LLGYDSRIALEKGIEFFLEIIHPDDLQTITEKNSRALQAADNQAPGSPEPVVDFKYRL
                     RHANGEYRWFHTFGTIFGRGSENEVEDLINISIDVTEEYFLSQQLAEKNAQLKRSEER
                     YHRMISEVEDYAILLLDKDGFVQNWNKGAEKIKGYRADEIIGKNFRVFYRKQDQRRKL
                     PEKLISEAVTTGKASHEGWRVRKDGTKFWGSIVITALHNEAGDIIGFSKVTRDLTERK
                     FHDDRLKEYANRIEKNNEELQKINKELDSFAYVASHDLQEPLRKIRTFCNFILSKGKE
                     QLPRDTVDYFDRITAAAERMQRLIEALLNYSRTNTMQIIYEATDLNVTISQVQRNLAE
                     MIAEKNATIEFSNLPTIQAVPLQFQQLFSNIIENSLKYSRENVPPVIKISATLVPGKN
                     HPFTKSKQCYEITVADNGIGFEQEYAENIFKLFQRLHGRNEYYGTGIGLAICKKIVEN
                     HKGTIKATGFPGAGAIFTIILPAN"
BASE COUNT         1634 a         1336 c         1326 g         1731 t
ORIGIN      
        1 aaaagcttct ggcaattctt ccaaaaatcg gctcggctca ttttgaacaa ggctgccgaa
       61 acggtaacgc gcattggcat aagtcaagtg caaatgtttt tgcgccctcg taacagcaac
      121 ataaaataaa cggcgttctt cctccaactc ttcgcgcgtg tttatactca ttgcatttgg
      181 aaaaagggtt tcttccaaac cagcgacaaa cacaaccgga aattccagtc ccttagccga
      241 atggatggtc atcattttta ctacatccgc acgatcatcg ccttcatcag cgtcggttaa
      301 taaagttatc tgctggagat atgcacctaa gcgcttatca cccacttctc cttcttcatt
      361 tgaaggactc tccgtccact ctttgatgga gttcaacaat tcctgtacgt tctcatatcg
      421 cgccagccct tccgtgcttt tgtcgttgaa taattcttta atgaagtttg tgtgtttgcc
      481 tacctgtacg gctacgtcat aagcattctt ctcctgcagc atgctttgga aataccggat
      541 cattgtgacg aaattttgga tagcctcgag ggttcctgcc ttaaatccaa actcgccagc
      601 tctcgtgagc acttcccaaa acgtgatccg ttgttcattt gctgcgatca caattttttc
      661 aacggaggtc ttgcctattc cgcgaccagg ataattgatg atgcgcctta gtgcttcttc
      721 atcccttgta ttcacgatta ctctcaagta cccgagaaag tcttttattt cttttctctg
      781 gtaaaagctg acacctccaa agatcctgta accgatcccc attcttctca ggttttcttc
      841 gaatgcgcgg ctttgcgcat ttgtgcggta gagcaccgca aaatctttat tgtaaaaatg
      901 gttacgaagt ttttgttcct tgatcgtatc cgcaatatac tttccttcat cattgtcggt
      961 catcgtgcga accagtttga tcttttcgcc ttgcgcgttt tcagtccaca atacttttgg
     1021 caattgccct ttattatttt tgatcacttc attcgcaacg ttcaaaatgc tttgcgtgct
     1081 ccgataattt tgctcgagct tgatcacctt tacatcgtca taatcttttt gaaactggag
     1141 gatattttcg atcgtggcgc cgcggaaact gtaaatgctc tgcgcatcat cacccactac
     1201 acaaatgttc tcgtgtactg ctgccagtag ctttgtgatt tgatattgca ccgggtttgt
     1261 atcctggtat tcatcgatca aaatatattt aaacttatgc tggtacttgt gtagtaccgc
     1321 cgggaagtcg cgcaacagtt catacatttt aaaaagcagg tcgtcaaaat ccatcgctcc
     1381 gttcttgaaa catcgcgcct ggtaggcttt atacacctgc gcaagcgcgg gtcggttggt
     1441 gcgcatatct tcttgctgga tgtaataatc gtttgcatat tcgtctggtc ccaccagcgc
     1501 attttttgca gccgatatgc ggttatgaac aacatttgct ttgtataact tatcatccaa
     1561 aagcaattca tgtacgaccg tttttatcac ggaccggctg tcgtctgtgt cgtagatcgt
     1621 aaaattattt ggatagccaa gtcgcggagc ttcacttctg agtatgcgcg caaaaacgct
     1681 gtgaaaggtg ccgatatata aatttcttgc ttccgtgttt cccagggttc gttcaaccct
     1741 ttccttcatc tctgcagccg ccttgttagt gaatgtaagt gcgagtatgt tgaaggagtc
     1801 gacgccattt gccatcaggt gggcaattcg ggttgtcagg actttcgtct tgccgctgcc
     1861 ggcgcctgct acgatcatga ggggcccatt tatgtgggtt gccgcttcgc gctggggttc
     1921 attcagtccc ttcaaataat catgcattgc cgcaagttaa acaatatgga agtcgcaatt
     1981 ggctacaccg caagggtggt gaaaaaatta ttttaacgca atttttttct ttgcaaatgt
     2041 ttcctttagc tatcgttttg catctaataa ttagaataaa ttttgagaaa tgaaaacaaa
     2101 ttctacacaa caggagatct tgctgatgac gaacacttct tttgctcaga ggcagtggtg
     2161 cgaaaaagac aatgagagga aaaatcttac tccgcaggaa caattcgaag aagcttgtgc
     2221 aaatggtttg atccaggaat tattgcctga ggtcttcgag gcgccagata acaaaagatt
     2281 atacttatgg caaatgagac ccggcttttc cttcgtgcaa ctggaagtag gcgaatttcc
     2341 gatcgctcct gaaaaagagt tctcgatcga cccgcataac ttcctgcccg caacgtggta
     2401 taattaactt ttaatcaact atacattctc tttttatcaa acggtcccgg ccaatatgcg
     2461 ccgggatttt ttttataaag cccggacagt tattttttgt cggcggcata tgctatagta
     2521 cgccttatga tctttgtagc ctttccttta tcattataag ttgtctgctg aagccagttg
     2581 ccatgatcgt cccagtcgga gtatttatac gtcgtaacgg ttgtcgttgc tgagtccttt
     2641 ccaaaatttg tttcggtcaa ttgctcctgt tcatttttat cgttgagttt cgcgttgctg
     2701 cgatatgcta ccttacctgt gctatccttc gattcatttc caacaaaaaa gtggctctga
     2761 tatgtacttg caaaagaccc tttgaaactg ccgtcaggac ggtgttctgt tccacctgta
     2821 atttgcccga attcgtttgt tgtgatgctg tcaaaataag aggtgatttt gccggttgaa
     2881 tcaagcattt tcgcgacgct gtatttccgg tctttgtcga tgtccaccgt catcgaggaa
     2941 gcggtcttat tattttccat cgtcgtcatt ccggtaaaga gaccatcgtc gctgtgcgta
     3001 tataattgct cgcttgtgac ctttccttta ctgtctttcg attcatacct gcttgaaaag
     3061 ccattcgcat cgaactcctg cacatagttg caacaggtat ccatcgcacc catcttccct
     3121 gtactgtcta ctgtgtaagt ggttgtttca atccgcgtga tattgccctt taaattctgt
     3181 tgttcaagat cgggcatctg caaaaatttt ttttcggttg gttgattaca ggcgaacaac
     3241 aacagcgcta cggctgtgaa agcttttctc atgtacgaat ttttggttta attctgaatg
     3301 atttcttttt aaaggtaagt atctttgacc tctgccatgt gaaaagattg actcgcttgt
     3361 ctcaggtgtt caaagtagat ttatgaactt tagcacttat tctgtcggta aaattttgat
     3421 ttcttcgata tgaatgcatc aggtgagaac cttctggtag tcccggcctc agacaagacc
     3481 cttgaagaaa gcgcccttga gtatttgcaa ttcaagtatt ttcctgcata tgcaaggttt
     3541 cttttggaaa ataacgttca acaactcgtt gaagagcagt tgcggctgtc gcgcatttta
     3601 aacttgccat tgctgaaatt ttttgaatca tcaggtgaag cggaaatgat caaattaggc
     3661 acagagacgc tgactgaact tcttgagtat tgcgctgata atcgtgcgaa ggaatacatc
     3721 acgttgtcgc tgaaaagatg gatagcgaat caattgccgg tcgttacgcg tcaccaggta
     3781 gtagccgaag acatcacgac cctgagcctt gtgcgacgtc gtagctttcg gcatatgttg
     3841 ccgttgtaca cgtctgacct tgacctgtac ataaatgtga tggacgaatt agacaggttt
     3901 accgctgaac tcgattcgct ttcgttcaaa acacttttaa gcataaacaa ggacatcagt
     3961 gagcaggtgc aggcgcttgg tcatattggt aactggcagt gggaccttcg cacgcatcgg
     4021 ctgagctggt cgaacgaact ttatcgcatc tatgaactgg agccagaaag cagcatcaca
     4081 tctgaaaaga tcgcttcata caaccatccc gaagacggtg agcgagtcaa taacatcatg
     4141 caattgtcgc aggaaacttg cagcccgcac gatttctatt acaggataat cctgaaagat
     4201 cagaagataa agatcctgca cgccagagga caggtgcgac ttgacgataa tggggaaccg
     4261 tttgagatgt tcggaacatt gcaggatgtt acaagccaaa agttaaacga agaagagctc
     4321 agtgagaaaa caaagtttat tcaaaaaatt acagacgtaa cgccatgcct gatcgctgtt
     4381 tacaatgtaa aaaccggcaa atacgcattc atcaataatg cgcttcagac tttactcggt
     4441 tatgacagtc gcatcgcgct ggagaaagga atagaatttt tccttgagat aattcatccc
     4501 gacgatctgc aaacgatcac ggaaaaaaat tcccgtgcgc ttcaggctgc ggataaccag
     4561 gcgccgggtt cgccggaacc ggtggttgac ttcaagtacc ggctcaggca tgcaaacgga
     4621 gaatatcgat ggttccatac attcggaaca atattcggtc gcgggagcga gaatgaagtt
     4681 gaagatctga tcaatatttc gatcgacgta acggaagaat atttcttgtc gcaacagctg
     4741 gccgaaaaaa acgcgcagct gaaacgaagc gaagagcgct atcatcgtat gatcagtgaa
     4801 gtggaagatt atgcaatcct gttgcttgat aaagatggat ttgttcagaa ctggaacaaa
     4861 ggcgctgaga aaataaaggg ttacagggcg gacgaaatta tcggcaaaaa tttccgcgta
     4921 ttttaccgaa agcaagacca acgacgtaag cttccggaaa aactgatctc cgaagcggta
     4981 acgaccggca aagcaagcca tgaaggatgg cgcgtgcgaa aagacggtac taagttttgg
     5041 gggagtatag taataaccgc tttgcataat gaagccggtg acatcattgg cttttcgaaa
     5101 gtgacccgtg atcttaccga aaggaaattt catgacgaca ggctgaaaga atatgcgaac
     5161 cgaatagaga aaaataatga agaacttcaa aaaataaata aggagcttga ttcatttgca
     5221 tatgtcgcaa gccacgatct gcaggagcct ttgcgtaaga tcagaacgtt ctgcaatttc
     5281 attttgtcga aaggaaagga gcaactgcca cgagacacgg ttgattattt cgaccggatc
     5341 actgcagcgg ctgagcgaat gcaaaggttg atagaggcgc ttctaaatta ttcgcgcact
     5401 aatacaatgc aaataattta tgaggcaacc gatctgaatg tgacaataag ccaggtacaa
     5461 aggaatctcg ccgaaatgat cgctgaaaaa aatgcaacga tcgagttcag caatttgcca
     5521 acgatacagg cagtgccttt gcagtttcag caattgtttt caaacatcat cgaaaactct
     5581 ctaaaatata gccgcgaaaa tgtaccacct gtgataaaga tctcggccac gctcgtgccg
     5641 ggaaaaaacc atccgtttac aaaatctaag cagtgttatg aaataacggt cgccgataac
     5701 ggaattggat tcgaacagga gtatgcggaa aatatcttta agctttttca gcggctgcat
     5761 ggaagaaatg aatactacgg taccggcatt ggcctggcga tttgtaaaaa gatcgtcgaa
     5821 aatcataaag gaactatcaa ggcgaccggg tttccgggtg caggagcgat ctttacgatc
     5881 atactgccgg ctaattagtc ttactgcaaa aacgatcgta acaaacatta ttcagcaaca
     5941 agcgcagcgg cgccaaaaac acctgcgctg tctccgagca tcggcttaaa cagaggcact
     6001 tcgacgcggt cgttgaaaat atatttt
//
LOCUS       DASQJI010000838         2825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1362044,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000838 DASQJI010000000
VERSION     DASQJI010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362044"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VEV83_21855"
     CDS             <1..300
                     /locus_tag="VEV83_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HYK47844.1"
                     /translation="AWRNDRPRPIQLLPVPHAVEVMAPIPDYPPMTFRYKGRLHKVEK
                     ADGPERIEPEWWIEKGSLRDYYTVEDEEGKRFWIFREGQYDADKIPSWFIHGFFA"
     gene            312..>2825
                     /locus_tag="VEV83_21860"
     CDS             312..>2825
                     /locus_tag="VEV83_21860"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HYK47845.1"
                     /translation="MSYTELQVTTNFSFLRGASHAEELVQQALAYGYGEIAITDRNTL
                     AGIVRAYAAAKGKDIRVITGCRLDLVDGASLLAYPTSKEAYEQLCTLLTKGNLRTEKG
                     KCDLYKTDVYEHSKGLKFIVIPPSALDPMFDFDDSFKKILAEYCEAFGNEIYLAAVRS
                     YQGDDFKKLFRLSQLAKQFDIPLIATNDVHYHNRERRELQDVLTCIREKCTIYTAGFL
                     LHENAERYLKPEDEMVRLFRQYPDAINRTRELAEACNFSLDSLKYLYPEELTTEGRTP
                     QQELTMLTWLGATEQFGDDIPQKTKETIIHELDFIEKMNYASYFLTVYDIVRYARQQG
                     ILCQGRGSAANSTVCYCLGITSVNPTKFDLLFERFLSSARNEPPDIDVDFEHERREEV
                     MQYIYNKYGRDRAAIVATVTQQHQKGAVRDVAKAMGLSVDAVNRLSKSVWEFTEEWFE
                     ENRLAEQGIDPRDDHLKKVLELTEQYMGFPRQLGQHTGGFVITQEKLSNLCPILNARM
                     ENRTCIEWNKDDIDALGFLKIDVLALGMLTCIRKCFDLAKEHYDLNLTLANIPQDDRA
                     VYEMVSRADTIGVFQIESRAQQSMLPRLKPKDFYDLVIEVAIVRPGPIQGDMVHPYLR
                     RRNNEEAVEYPSKELEQILGRTLGVPLFQEQAMRIAIVAAGFTATEADQLRRSMATFK
                     VKGLVTQFQEKLITGMLKNGYTKEYAFRVFKQLEGFGSYGFPESHAVSFALLVYVSAW
                     IKCYYPDVFACGLLNSQPMGFYAPAQIVSDARKHGVEIRPIDVNYSSWDNTLEERSGD
                     YCALRLGFRQIKGMRHEDAEVLVSARKNIFSTINELLDAG"
BASE COUNT          857 a          550 c          669 g          749 t
ORIGIN      
        1 gcatggcgta acgacaggcc gcgtcctata caacttttac cagtgcccca tgcagttgaa
       61 gtaatggcac cgattcctga ttatcctcca atgaccttcc ggtataaagg caggctgcat
      121 aaggttgaaa aagcggatgg cccggaacgg atcgaacccg aatggtggat agaaaaagga
      181 tcgctgagag actattacac cgtagaagat gaagaaggca aacgcttttg gatctttcgg
      241 gaaggtcagt atgacgcaga taaaattcct tcatggttca tacatgggtt ttttgcataa
      301 aaaaatgaac gatgagctat actgaattac aggtaacaac aaattttagt tttttaagag
      361 gtgcttctca cgctgaggaa ttggttcagc aggcattggc ttatggttat ggtgagatcg
      421 cgatcacgga cagaaacaca cttgctggta ttgtacgcgc atacgctgct gcaaaaggaa
      481 aagatataag agttattaca ggctgccggt tggacctggt tgatggcgca agtttgttag
      541 cttatccaac aagcaaagag gcttacgaac aactatgcac attactcaca aaaggtaatc
      601 tgcgaacgga aaaaggaaaa tgtgatctgt acaaaaccga tgtgtacgag cattcgaaag
      661 gattgaagtt tattgttatt ccgccttctg cgttagaccc aatgttcgat ttcgatgact
      721 catttaaaaa aattcttgcg gaatattgcg aggcttttgg taatgaaatt tacctggctg
      781 cggtacgttc gtaccagggt gatgatttta aaaaattgtt tcgtctttct cagctcgcta
      841 aacagtttga tattccgctt atcgctacca atgatgtgca ttatcataat cgtgaaagac
      901 gtgagttgca ggatgtgtta acatgcatcc gcgaaaaatg tacgatctat acagcaggtt
      961 ttcttctgca tgaaaacgca gaaagatatt tgaagccgga agatgaaatg gtacggttat
     1021 tcaggcaata tcctgatgcg atcaaccgaa cccgggaact tgctgaagct tgtaacttca
     1081 gtctcgatag tttgaaatat ctataccctg aagaacttac aactgaaggc agaacgccac
     1141 agcaggaatt aaccatgctt acgtggctgg gtgcaacaga acaatttggt gatgatatcc
     1201 ctcaaaagac aaaagaaact attatccacg agctggattt cattgaaaaa atgaattatg
     1261 cttcttattt ccttaccgta tatgatattg ttcgctacgc caggcaacag ggcattctgt
     1321 gccagggccg tggatcggca gcgaattcca ccgtttgcta ttgcctcggc ataacatctg
     1381 tcaatccaac aaaatttgac ttattattcg aacggtttct ctcttcagca cgaaatgagc
     1441 cgcctgatat tgatgttgat tttgaacatg agcgccgcga agaggtcatg caatatatct
     1501 acaataaata tggccgcgac agggcagcta ttgtagcgac agtgactcaa cagcaccaga
     1561 aaggcgccgt acgcgatgta gcaaaagcga tgggtttatc cgttgatgca gttaatcgcc
     1621 tgtctaaatc ggtgtgggaa tttacagaag aatggtttga agaaaatcgc cttgcggagc
     1681 agggaatcga tccacgtgat gatcatttga aaaaagtgct cgaactcacc gaacaataca
     1741 tgggttttcc gcgacaactt ggccagcata caggaggttt tgtcatcacg caggaaaagc
     1801 tttcgaattt atgccctata ctgaatgcac gaatggaaaa cagaacgtgt attgaatgga
     1861 acaaggatga tatcgatgca ctcggatttt tgaaaataga tgtacttgct ttaggtatgc
     1921 tcacatgcat acgcaaatgc tttgacctgg cgaaagaaca ttatgatctc aatttaacgc
     1981 tcgcaaatat tccgcaggat gatcgtgcag tatatgaaat ggtaagtcgc gctgatacca
     2041 taggtgtatt tcagatagaa agccgtgcgc agcaatcgat gttgccaaga ttaaagccaa
     2101 aagattttta tgatcttgtg attgaagtgg cgatcgtgag accaggtcct atacaaggtg
     2161 atatggtaca tccgtattta cgtcgcagaa ataatgagga agcggttgaa tacccctcaa
     2221 aagaattaga acaaattttg gggcgtacgc ttggcgttcc gcttttccag gaacaggcaa
     2281 tgcgcattgc aattgtagca gcaggattca cagcaacaga agcagaccag ttgcggagaa
     2341 gcatggccac atttaaagta aaaggattgg tgactcaatt ccaggaaaaa ttaattaccg
     2401 gcatgttgaa gaacgggtat acaaaagaat atgcgtttcg tgtttttaaa caactggaag
     2461 gatttggcag ctatgggttt cccgaaagcc atgccgtaag ttttgcactt cttgtgtatg
     2521 tatccgcatg gatcaaatgt tattatcccg atgtctttgc ctgtggctta ctcaacagtc
     2581 agccgatggg tttttatgca ccggcgcaaa tcgttagtga tgcccgtaaa catggtgttg
     2641 aaataagacc catcgatgta aattattctt cctgggataa cacgctcgaa gaaaggtcag
     2701 gagactattg cgcattgcga cttggtttca ggcaaataaa aggaatgcgc cacgaggatg
     2761 cagaagtgtt ggtatccgct agaaaaaata tcttcagcac aattaatgaa ctactcgatg
     2821 caggc
//
LOCUS       DASQJI010000839         5362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1670331,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000839 DASQJI010000000
VERSION     DASQJI010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5362
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670331"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..749)
                     /locus_tag="VEV83_21865"
     CDS             complement(69..749)
                     /locus_tag="VEV83_21865"
                     /inference="COORDINATES: protein motif:HMM:NF036807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK47846.1"
                     /translation="MSIKIIGAGFPRTGTNTLRESLEMLGFNKTYHMKQLLVHPENLH
                     YWTTLRETHTTDWDGLYDGYEATVDFPCYPWYKEHMKRYPDAKVILSLRPFEDWYTSF
                     SSTIWKAQNPPPEHQAAMAERVGSDPRLQKVMKVMDFAKVAIIHDHFHDRFADKEYME
                     KVFNDHNEEVKNYVPADKLLVYDVREGWEPLCKFLDVEVPGEPLPHTNKKEDFQAMVA
                     ELMQGHLV"
     gene            894..2468
                     /locus_tag="VEV83_21870"
     CDS             894..2468
                     /locus_tag="VEV83_21870"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HYK47847.1"
                     /translation="MKKMCVFSFFLFYSIVSFSQGNPNDSAANKQAPPKDRNMFGIGI
                     PRGLIQTTDGLADGYVLFAVPNSASIYLINRKGEVVHEWKGNYASMSTVAYLQNDGSI
                     IQNAADPDFPIFAGGGEAGRIEKITWDSKVIWDFEYANEEHLHHHDFTVMPNGHILAI
                     AWEARSANEVLAAGRKPELIPKAGLWPDQIVEIEPLDERHGRVVWEWHVWDHLVQDTD
                     PKKAHYGKPADHPELLDVNIGEPLPPRISQDSFDILKKQGRIIWRNQTLDNEGSDVYH
                     FNAIKYNPDLDQIVFSSPHLSEIYIIDHSTTSKEAAGHTGGRWGKGGDFLYRWGNPQN
                     YKRGDSTDERLFGQHDVRWIEKGCPGEGHLTVFNNNHYGPSRDSINYSSVFELVPPTD
                     SKGNYVMEKGKPFGPDKPVWMFKAADSLSFWSSFISGAQRMKNGNTFINEGAKGRFFE
                     VTSDGKVVWQYINPYRGDARKVNGDPIPPMPLAFITFRSNFIPADHPGLANKKLEPLD
                     PQPKVFVMPQPAGNRQ"
     gene            2513..4042
                     /locus_tag="VEV83_21875"
     CDS             2513..4042
                     /locus_tag="VEV83_21875"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HYK47848.1"
                     /translation="MRKNFLFFYIFTCLSIWAVGQPASPPGRNMFGLHVPRGLKVNNE
                     GLADGYVMFAVPNSPYVYLINRRGDVVHQWKCSYGAFNAYLQNDGSIVVGVFDPDFPT
                     FGFGGPYGRLQKVSWDNKILWNFEYADDTEIIHHDFAVMPNGHILAIAYEATNYDKAI
                     AMGRMPDKTPKDGPWLEKIIEIVPDGKKGGKVVWQWHLKDHLIQDFDAKKSNYGKPAD
                     HPELLDVNMGPKLPPAITQDSVEILQSKGMEGPNATAGNLGADIFHFNAIKYNADLDQ
                     IVFSSPALSEVFIIDHSTSTQQAATHKGGRWGKGGDFLYRWGNPKNYQRGDSTNEQLF
                     GQHDVRWVQKGYPGEGDLTIYDNDIPYRDSMNYSMIVEIKPPTDTKGNYFLQENKTFG
                     PEKPSWTYIAPDTISFWGSFISGAERLKSGNTFINEGPKARFFEVTPDRKIVWEYLNP
                     YRGNISEPNGDPSPLMPMTYFAFRANFIAADHPGLANKKLEPIVPQPSPFILPPPGDK
                     H"
     gene            4257..4484
                     /locus_tag="VEV83_21880"
     CDS             4257..4484
                     /locus_tag="VEV83_21880"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HYK47849.1"
                     /translation="MTSDLFTRIPELITKVYPNSFTAEYNCNKLVYYETFGKIEDAIA
                     REKQLKKWNRSLKKKLISDFNPGWKDLYIGL"
     gene            4409..4561
                     /locus_tag="VEV83_21885"
     CDS             4409..4561
                     /locus_tag="VEV83_21885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47850.1"
                     /translation="MESIIEEEIDFGFQSRVERFIYWSLMLLRADARSGPGMTALWLP
                     YVPAAN"
     gene            complement(4634..>5362)
                     /locus_tag="VEV83_21890"
     CDS             complement(4634..>5362)
                     /locus_tag="VEV83_21890"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK47851.1"
                     /translation="RKMEIYAGMIDNLDHNIGRLIQYLKEIGEYDNTFFVFLSDNGPS
                     SADANLTPDDHDPYPYMGTANSFVAYGSQWAHASSAVNSFYKGYSAEGGIHGPMLIKM
                     PKQQKGNIIDTAFTTIMDLAPTFLELAHAKYPADYDGKKLVPYKGTSLLPLLNNEKTL
                     VHDGDYVMGWELFGRCAIRKGKWKITKIEPPFGKGVFQLYDIKNDPTESHDLSAQYPD
                     KYEELLNAWKVYVNENGVILPGGK"
BASE COUNT         1542 a         1164 c         1204 g         1452 t
ORIGIN      
        1 ctaaatgaat tcgccgcccc atgcggagcg gcgaaaaatt attaaagccg tttgaaaaca
       61 taatcgcgtc aaaccaaatg tccttgcatc aactctgcta ccatcgcctg gaaatcctct
      121 ttcttgttgg tatgcggtaa cggttcgccc ggcacttcta catctaagaa tttacaaagc
      181 ggttcccaac cttcgcgaac atcatacacg agtaatttat ctgcaggaac ataattcttc
      241 acttcttcat tgtgatcgtt aaaaaccttt tccatatact ctttatctgc aaaccgatcg
      301 tgaaaatgat cgtggataat agccaccttt gcaaagtcca taaccttcat cactttctgg
      361 agccgcggat ctgaccccac tcgttctgcc atcgccgcct ggtgttccgg cggcggattt
      421 tgtgctttcc atattgtgct ggaaaagctc gtgtaccaat cctcaaacgg tctcaaacta
      481 agaataactt tagcatcggg ataccttttc atatgctctt tataccatgg ataacatgga
      541 aaatctactg tggcctcata gccgtcgtaa agtccgtccc agtccgtggt gtgcgtttct
      601 cttaatgtcg tccaataatg cagattctca gggtgaacaa gcaattgctt catatggtac
      661 gtcttattga aaccaagcat ctcgagagat tctctaagtg tatttgtgcc ggtcctgggg
      721 aacccggcgc cgataatttt aattgacatt gaagtttgtt ttgatttact tgaaaaaagg
      781 ttttaaagat acctgtaaaa atatcaaatt cagtttttta tttcgaggtt taaaaaataa
      841 tttagcaagc ttcaggtacc aaatcacaac tgatcaaatt taactactcc gatatgaaaa
      901 agatgtgcgt tttctctttt ttcctatttt attcgatagt gtccttttca caaggcaacc
      961 cgaacgacag cgccgccaac aaacaagctc ctccgaaaga caggaacatg ttcggcatcg
     1021 gtattccgcg cggcctcatt cagacaactg acggacttgc tgatggttat gttctatttg
     1081 cagttccaaa ttctgcatcc atttatctca ttaatcgtaa aggtgaggtt gtacacgaat
     1141 ggaaaggaaa ttatgcctcg atgtctaccg ttgcctacct gcagaacgac ggttcgatca
     1201 tacaaaatgc agcggacccc gattttccaa tctttgccgg tggcggcgaa gctggaagaa
     1261 tagaaaaaat tacatgggac agcaaagtga tttgggattt tgaatatgct aatgaagagc
     1321 atcttcatca ccacgatttt accgtgatgc ctaacggaca tatccttgcc attgcctggg
     1381 aagcgaggtc tgcgaacgag gtgctggcag cgggcagaaa gcccgaattg ataccgaaag
     1441 ccggcctttg gcctgaccag atcgttgaaa tagaaccact ggatgagcgt cacggaaggg
     1501 ttgtttggga atggcatgtt tgggatcatt tggtacagga caccgatcca aaaaaagcgc
     1561 actacggaaa accggcagac catcccgaac tgttagatgt gaacattggc gaacctttgc
     1621 cgccccgaat ttcgcaggat agttttgaca tattgaaaaa gcagggacga ataatttggc
     1681 gaaatcaaac gctcgacaac gaaggttctg atgtttatca tttcaatgcg atcaaataca
     1741 acccggacct ggaccagatc gtattcagtt ctccgcatct gagcgaaatt tacattatag
     1801 accatagcac gaccagcaag gaggccgctg gtcacacagg aggccggtgg ggaaaaggtg
     1861 gcgacttttt gtatcgctgg ggtaatccgc agaattataa aagaggagat tcaaccgatg
     1921 agcgattatt cggacagcac gatgttagat ggatcgaaaa gggatgcccg ggtgaaggac
     1981 acttaacggt attcaacaat aaccattacg gcccttcacg cgacagcata aattactcga
     2041 gcgtgtttga acttgttccg cctacagata gcaaaggcaa ttatgtgatg gaaaaaggga
     2101 aaccgtttgg gcccgacaaa ccggtctgga tgttcaaagc agcggattcg ctttcattct
     2161 ggagcagctt tatttccggt gcacagcgca tgaagaatgg taatacgttt atcaacgaag
     2221 gcgctaaagg gagatttttt gaagtaacga gtgatggtaa agtcgtttgg caatatatca
     2281 atccctaccg cggagacgcg cgaaaggtga acggcgatcc cattccgccg atgccgttag
     2341 cgttcattac attcaggtcg aattttattc ctgcagatca cccgggactt gcaaataaaa
     2401 aactcgaacc cttagatcca caacctaaag tattcgttat gccacagcct gcaggcaaca
     2461 gacaataatc aaatagacaa taatcatctt atcacttata aactactgtt caatgagaaa
     2521 aaattttttg tttttttaca tatttacgtg cttgtcgatt tgggccgtgg gccaaccagc
     2581 gtcgcctcca ggaagaaaca tgttcggctt gcatgttccg cgcggcctta aagtgaacaa
     2641 cgagggactt gcggacggat atgtaatgtt tgccgtacca aattctcctt atgtgtatct
     2701 cattaaccga cgaggcgatg ttgtgcacca atggaaatgc agttacggag catttaatgc
     2761 ctacctgcaa aatgacggat ccatcgttgt cggtgtgttt gatcccgatt ttccaacatt
     2821 tggttttggt gggccgtacg gcaggttaca aaaagttagc tgggacaata agatactctg
     2881 gaattttgaa tatgctgatg atactgagat catacatcat gacttcgcag taatgcccaa
     2941 tggtcatata cttgccatag cgtatgaagc aacaaactat gataaagcga tcgcgatggg
     3001 cagaatgccc gacaaaacac cgaaagatgg gccatggtta gagaagatca ttgagatcgt
     3061 gcctgacggc aagaagggag gaaaggttgt gtggcaatgg catttaaaag atcacctgat
     3121 ccaggatttt gatgcaaaga aatcgaatta tggaaagcct gcagatcatc ctgaattgct
     3181 ggatgtgaat atgggcccga aattgcctcc ggccatcacg caggacagcg tagaaatttt
     3241 gcagtcaaaa ggaatggaag ggccgaatgc cacagcagga aatcttggag ccgacatctt
     3301 tcatttcaat gctatcaagt ataacgcaga tcttgatcaa attgttttca gttcacctgc
     3361 cttgagtgag gtctttatca ttgatcacag cacgtcaacg caacaggccg caactcataa
     3421 aggtgggcgc tggggcaagg gcggagattt tctttatcgc tggggaaatc caaagaatta
     3481 tcaaagaggt gattcaacaa acgaacaact ctttggccag cacgatgtac ggtgggtaca
     3541 aaaaggatac ccaggagaag gcgacctaac tatttatgac aacgatattc cttacagaga
     3601 cagcatgaat tactccatga tcgtagagat caaacctccg actgatacta agggcaatta
     3661 ttttttacaa gaaaacaaaa cgtttggacc tgaaaaacca tcctggactt atatagctcc
     3721 ggatactatt tctttttggg gcagttttat ctcaggagcg gagcggttaa aaagcggcaa
     3781 cacgtttatc aacgaagggc caaaagcgcg tttctttgaa gttacgccag acagaaaaat
     3841 tgtttgggag tatttgaacc cgtatcgcgg aaacatctcg gagccaaacg gagatccaag
     3901 tccgctgatg ccgatgacat attttgcatt cagagcaaac tttatagcgg cagatcaccc
     3961 ggggctcgcc aataaaaaac tggaaccaat tgttccgcag ccatcaccgt ttattctacc
     4021 accacccggc gataaacatt aaaagatctt tttcgtcaag catcaaactt aacgcattgt
     4081 gctattaaag tcgagtcaaa tgatcgcgat ccttgcagta aaatagtgtt caagtttcat
     4141 gaacgggacc gcacgtcttt cccgcgaagg cgggaatctg ctaactttag tttatgcaat
     4201 atggagggac agtctatatc taaacaaatg tgcatcacga agtcttgtac gttagcgtga
     4261 cttctgacct ttttacaaga attccagagc ttattacgaa ggtttatcca aattcattca
     4321 ccgcagaata taattgtaac aagcttgttt attatgagac atttggcaaa atagaggatg
     4381 caatcgcaag agaaaagcaa ctgaaaaaat ggaatcgatc attgaagaag aaattgattt
     4441 cggatttcaa tcccgggtgg aaagatttat atattggtct ctaatgttac ttagagcaga
     4501 tgcccggtcg gggccgggca tgacggcgct gtggttgcca tatgtgccgg cagcaaacta
     4561 gctttagaga atttttctga tccatcttaa tggcacgaca ggtttaaact taatcaacag
     4621 agtttgatgc tttttatttt ccgcccggca agatcactcc attttcgttt acgtacactt
     4681 tccaggcgtt taagagttcc tcgtatttgt ccggatattg tgcagacaga tcgtgcgatt
     4741 cagtcgggtc gtttttgata tcatagagtt gaaaaacacc tttcccgaat ggcggttcta
     4801 tttttgtgat cttccatttt ccttttctga tcgcacatct gccaaacagt tcccatccca
     4861 taacataatc gccgtcgtgc acaagagttt tttcgttgtt caataaaggc agtaatgaag
     4921 tgcctttgta aggaaccaat tttttcccat cgtaatctgc cgggtatttt gcatgtgcga
     4981 gttcaagaaa cgtgggcgcc aggtccatga tagttgtgaa tgcggtatcg ataatattac
     5041 ctttctgttg cttcggcatt ttaatgagca tcgggccgtg aataccacct tcggcactat
     5101 agcctttgta aaaactattc actgcgcttg aagcgtgcgc ccattgcgag ccatatgcaa
     5161 cgaatgaatt cgcggtaccc atgtatggat aaggatcgtg atcatcgggc gtgaggtttg
     5221 catccgctga agacggcccg ttatcagaaa gaaaaacaaa aaaagtatta tcgtactctc
     5281 ctatttcttt tagatattgg atcagcctgc cgatattatg atcgaggttg tcgatcatgc
     5341 ccgcataaat ttccattttc ct
//
LOCUS       DASQJI010000840         6428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1670557,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000840 DASQJI010000000
VERSION     DASQJI010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6428
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670557"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1405
                     /locus_tag="VEV83_21895"
     CDS             <1..1405
                     /locus_tag="VEV83_21895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HYK47852.1"
                     /translation="SLVKTAKNTEFGKEHKFESIQSYENFTQQIPVRDYEDIKPYIDR
                     IKEGKHNVLWKGKPIYFAKTSGTTSGIKYIPITKDSIPNHIDTARDALLCYMAQTGNT
                     GFSNGKLIFLSGSPELERVGGIPTGRLSGIVNHHVPRYLRSNQLPSYETNCIEDWETK
                     LDKIVEETIDQDMTLISGIPPWIQMYFDRIMSLTGKKIGEVFKNLSVLVYGGVSFEPY
                     RSRLAESVGRPVDSIEVFPASEGFFAFQDTQDAAGLLLNTDSGVFYEFVPANEIHGPS
                     PTRITLKDVELNENYALIVSNNAGLWGYNVGDTVKFISKNPYRILITGRTKHFISAFG
                     EHVIAEEVEQALMNAASEEGVKVVEFSVAPMVAQSEGKSYHEWLIEFEELPKDLDGLA
                     LKIDDNLRKKNIYYDDLVSGNILSRLKIIPVRKNGFIDYMKSIGRLGGQNKLARLSND
                     RKIAEDLLEYTIRMKEA"
     gene            complement(1441..2136)
                     /locus_tag="VEV83_21900"
     CDS             complement(1441..2136)
                     /locus_tag="VEV83_21900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HYK47853.1"
                     /translation="MNSYSNARRHFVRTGLIAASGLTALQLFSGCSSEEDEGQKVSPP
                     EDLMQEHGLLNRILLIYDTCKSHLTNKTSFPIAALSSAANIIRKFVEDYHEKQEENYL
                     FPRFQKANQLTDLVNVLLQQHQAGRKLTDQILQLTKSQTAADAESEKLIELISSFNAM
                     YRPHEAREDTVLFPAFRKLVSKHEYDSLGEEFENNEHKLFGSDGFETMVNKVAEIEKG
                     LGIYELSKFTPQL"
     gene            complement(2267..3691)
                     /locus_tag="VEV83_21905"
     CDS             complement(2267..3691)
                     /locus_tag="VEV83_21905"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HYK47854.1"
                     /translation="MKNYSRVRALLNSVCLVFLAIIFFSLSACQKTPDLLPDNPYDNP
                     PDTNPPVFAGSHYNIIFILSDDIGYEVPTYSGGQSYSTPSLDFMAANGTQFTECHGNA
                     LCSPSRFMLATGKYNFRNYDHWGIMDTSQRTFANLLKDAGYTTCVSGKWQFDGGDASI
                     RKFGFDKYMVNNAYNLHADNEEEDSYYKDPQIYVDGDYMPAYKTYGKYGEDFFRQYVF
                     DFIDSNAHKKPFFVYWAMNLCHAPFSPTPDDPEFASWDPKKPREYADTLFFPSMVKYM
                     DKEVGLLLDKLRAANVEDSTIVIFTGDNGTTNILHSLWNGEVIPGGKSYPSETGTHMP
                     LVAYCPGTVPAGATDTSLISFVDFLATFGEVANTKIPGSYGITDGLSFAPQLKGEHYA
                     LRDWIFCHYTGSEKFYGNPQHLKRWIQDYTYKQYDVLVGPKSQKFYNFVLDPGERHPI
                     SPQHMTPEQQAISQKFMSTMSGLH"
     gene            3830..5029
                     /locus_tag="VEV83_21910"
     CDS             3830..5029
                     /locus_tag="VEV83_21910"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HYK47855.1"
                     /translation="MTFINLSLQISTAADMVKRIAIFGSTGSIGRQTLEVIAAHPDKF
                     TAEILTAYTNEKLLIEQALAFNPSVVVIADEKKYKTVKDALSDTMIKVFAGESALCEV
                     ALMDCYDLMLAAIVGYAGFKPTLNAIDTGKTVALANKETLVVAGELVMQKAYEKRVPV
                     IPVDSEHSAIFQCLVGEGRNKIEKIILTASGGPFLGKKPNFLVNVKRDHALQHPNWKM
                     GAKITIDSATLMNKGLEMIEARWLFSLHPEQIQVVIHPQSIIHSMVQFEDGSIKAQMG
                     LPDMKLPIQYALAFPQRIQSNYPRYDFKKPSTLSFEEPDMRTFRNLTLAIEALFKGGN
                     MPCVLNAANEIAVFAFLRNRIGFLDITAMVEQTMSKVPFIERPSLEEYFDSDAEARNF
                     AASLIQL"
     gene            5238..>6428
                     /gene="rseP"
                     /locus_tag="VEV83_21915"
     CDS             5238..>6428
                     /gene="rseP"
                     /locus_tag="VEV83_21915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HYK47856.1"
                     /translation="MTLLSIDWPGIGIKTLQLIFSLSILVTLHELGHFLTARWFKCRV
                     EKFYLFFDPWFSVWKKKIGETIYGIGWVPFGGYVKISGMIDESMDKEQLKQPPKPYEF
                     RSKPAWQRLIIMVAGVIMNVLLALFLFIMITYKWGDEFLPPQNLTYGVYADSLARTIG
                     IQNGDLLLAVDDKPFNNFFTIPADIILSKGKTLQIKRNGQPQNLTIPDDFKNALNHNK
                     LAGFVEVQFPVIVDSVITSQAKFLEGRLQKGDTVIAVNNKPFRYFHEFDSLKKSFANK
                     VISLTIRRGQDTLVVKAQLNENTQVGFQSVSPSELFGTIHRSYSLGESIPVGIDKCFS
                     TLDKNIKGLQLIITGQVKASESLGSVISIGKLFASQWDWRSFWSLTAILSIILAFMNI
                     LPIPA"
BASE COUNT         1883 a         1369 c         1439 g         1737 t
ORIGIN      
        1 atcgctcgta aaaacggcaa aaaatacgga gtttggcaag gaacataagt tcgaatctat
       61 ccagtcgtac gaaaatttta cgcagcagat cccggtccgg gattatgaag acattaagcc
      121 ctatattgac cggataaagg aagggaagca taatgttttg tggaaaggca aaccgatcta
      181 ttttgccaaa acgagcggca ctaccagcgg aataaaatat ataccgatca caaaagattc
      241 gatcccaaat catattgaca ccgcacgaga tgcgctgctt tgctatatgg ctcaaacggg
      301 caacacagga ttttcaaatg gaaaattgat atttctcagc ggttcacccg aactcgaacg
      361 agtcggtggc attccaaccg gcaggctaag cggtatagtg aaccatcacg ttccgcgata
      421 tctccgcagc aatcagctcc cctcctatga aacaaactgc atagaagact gggaaacgaa
      481 gcttgataag atcgttgaag aaacgattga ccaggacatg acacttatca gcggcatccc
      541 gccctggata caaatgtatt tcgaccgaat aatgtcgctg actggaaaga aaattggtga
      601 ggttttcaaa aatttgtctg tgcttgtata tggcggtgtg agttttgaac cttatcgatc
      661 gcgcctggcg gaaagtgtgg gacggcccgt tgactcgatt gaagtatttc ctgcgagcga
      721 aggctttttt gcattccagg atacacagga tgcagcaggc cttttattga acacagactc
      781 aggcgtattt tacgaatttg ttccggcaaa tgaaattcat ggccccagcc caacacgcat
      841 tactttgaag gacgttgagt tgaatgaaaa ttatgcactg atcgtgagca acaacgcggg
      901 gttgtggggt tataatgttg gagatacggt aaagttcatc agtaagaatc cgtaccgcat
      961 cctcattacg ggaagaacaa aacatttcat ctcggctttt ggtgagcatg taattgcaga
     1021 agaagttgag caggctttga tgaatgccgc cagcgaagaa ggagttaagg ttgttgaatt
     1081 cagcgttgcg ccaatggtgg cgcagtcaga agggaaaagt tatcatgaat ggttgataga
     1141 attcgaggaa ctcccgaaag accttgatgg gcttgcgttg aaaatcgatg ataacctccg
     1201 caaaaaaaat atttactacg atgaccttgt aagcggaaat atcttaagcc gcttaaaaat
     1261 aatccctgta agaaaaaatg gtttcattga ctatatgaaa tcgatcggca ggctcggcgg
     1321 acaaaacaaa ttagcccgtc taagcaacga tagaaagatc gcggaggacc tgctcgaata
     1381 tacgatccgc atgaaagaag cttagcaaca gttcaaaaac caaccgccct accgacgcaa
     1441 ctatagctgc ggagtgaatt tagacaattc ataaatgccc aatccctttt cgatttcggc
     1501 aactttattt accattgttt caaagccatc gctgccaaac aatttgtgct cattgttttc
     1561 aaattcctct cccaaactgt cgtattcatg tttggaaacg agctttcgaa atgcaggaaa
     1621 caatacagta tcttctcttg cttcgtgcgg acgatacatt gcgttaaacg agctaattaa
     1681 ttcaattagc ttttcacttt cagcgtctgc cgctgtttgt gatttggtaa gttgaagaat
     1741 ctggtcggtc aattttcttc ccgcctggtg ttgttgtaaa agcacgttta ctaaatcggt
     1801 taactggttt gctttctgaa aacgcgggaa caaataattt tcctcctgct tttcgtgata
     1861 gtcttcaaca aatttcctga tgatatttgc agcactgctt aatgctgcta tgggaaaaga
     1921 tgttttgttg gtaagatgtg atttacacgt atcgtaaatc aaaagtatcc ggttgagcag
     1981 tccatgttcc tgcataagat cttccggtgg agaaactttc tgcccctcgt cttcttcgct
     2041 gctgcagccg gagaataact ggagggcggt cagtcccgat gccgcaatta atccagtcct
     2101 aacaaaatgt cttcgcgcat ttgaatagct gttcatacga cgtttgctta ctgaaaaaat
     2161 gtttgtccat gattcgaatt gaaacaattt ttgcgtcgca aacttcatac aagaaatcag
     2221 gcgcagcaga aaaatgaagg ctccgcaaaa aagcggacaa acaggatcaa tgcaaaccgg
     2281 acatcgtgct catgaacttc tggctgatcg cctgctgttc aggcgtcata tgctgaggag
     2341 atatagggtg ccgttcaccc gggtccaaaa cgaaattgta aaacttttga ctcttcgggc
     2401 cgactaatac gtcatattgt ttgtaggtgt agtcctggat ccaccgttta agatgctgag
     2461 ggttgccata aaatttttct gagccggtgt aatgacaaaa tatccaatcg cgcagggcat
     2521 aatgttcccc tttcagttgt ggtgcaaaac taaggccgtc tgtgatgcca taactgcctg
     2581 ggatttttgt attcgctact tctccaaacg tggcaagaaa atcaacgaag ctgatcaggc
     2641 tcgtgtcagt agcaccagcg ggaaccgttc caggacaata ggccacgagc ggcatgtgcg
     2701 ttccggtttc tgaaggataa gattttccgc ccggaataac ttctccgttc caaaggctat
     2761 gcagaatatt tgtcgtgcca ttatcaccag tgaaaattac gattgtactg tcttcaacgt
     2821 ttgcagctct taacttatca agcaacaagc cgacttcttt atccatgtat ttaaccatag
     2881 aagggaaaaa caaagtatct gcgtattccc tcggtttttt cgggtcccag ctcgcaaatt
     2941 ccggatcatc cggcgttgga gaaaaaggcg cgtggcaaag attcattgcc caataaacaa
     3001 agaagggctt tttatgcgcg ttgctgtcaa taaaatcaaa cacgtactgc ctgaaaaaat
     3061 cttctccgta tttgccgtat gttttataag caggcatata atcaccatcc acatatatct
     3121 gcggatcttt gtaatagctg tcttcctcct cattgtcagc atgcagattg tatgcattat
     3181 tcaccatgta tttgtcgaaa ccgaatttgc gtatagaagc atctccgccg tcgaactgcc
     3241 atttacccga aacacaagtt gtgtagccgg catccttcag caggtttgcg aacgtacgtt
     3301 gcgacgtgtc cattatgccc caatgatcat aattgcgaaa gttgtattta cctgttgcca
     3361 gcataaaacg cgacggtgaa caaagcgcat tgccgtgaca ttcggtgaac tgggtgccgt
     3421 ttgcagccat aaaatcaagg ctcggcgtag agtaagattg accgccggag taagttggta
     3481 cttcataccc gatgtcgtct gacaatataa aaatgatatt gtaatgagaa ccggcaaaga
     3541 ccggtggatt cgtatcaggc ggattatcgt aaggattgtc aggcaaaagg tccggcgttt
     3601 tttggcaggc actcaaacta aaaaatatga tcgctaaaaa aacgaggcag acagagttta
     3661 gtaaggcacg aacacgagag taattcttca cagatatcag ttatgaatta ggatatgttg
     3721 taagtgatca gggtgcaaat ataaatggta ttctaaaatc tccccgatcg gataacgatt
     3781 taactatttt gaaaataaat acatacggat caaaatgcct tcgcgttgta tgacttttat
     3841 taatttatct ttacagattt caacggctgc tgatatggtg aaacgcattg caatttttgg
     3901 ctctaccggt tcaataggaa gacagactct tgaagtgatc gcagcgcatc ccgacaaatt
     3961 cactgcagaa attcttaccg cttataccaa cgaaaaattg ttgatcgagc aggcgctcgc
     4021 ttttaatcca tctgttgttg tgattgcaga cgagaagaaa tataaaacgg taaaagatgc
     4081 gctttcagac acgatgataa aagttttcgc cggcgaaagc gcattatgtg aagtggcgtt
     4141 gatggattgc tacgacctta tgctagcagc tattgtcggt tatgccggtt tcaaacctac
     4201 gctcaacgca atcgacacgg gaaaaacagt ggcgctggcc aacaaagaaa ctttggtggt
     4261 tgccggtgag cttgtgatgc aaaaggcgta tgaaaagaga gtcccggtta ttccggttga
     4321 cagcgaacac tccgcgatct ttcaatgcct ggttggcgag gggcgtaata agatcgaaaa
     4381 gatcattttg accgctagtg gcggaccgtt ccttggtaaa aaacccaatt ttctcgtgaa
     4441 tgtaaaacgc gaccatgctc ttcagcatcc caactggaaa atgggtgcaa agatcacgat
     4501 agattcggcc acgttgatga acaagggcct ggaaatgatc gaggcaagat ggttatttag
     4561 tcttcacccg gaacaaatac aggtggtcat tcatccacaa agtatcatac atagcatggt
     4621 gcaatttgaa gatggcagca ttaaagcgca aatgggcttg cctgacatga agttgccgat
     4681 acaatatgca cttgcttttc ctcagcgtat tcaaagtaat tatccgcgtt atgacttcaa
     4741 aaaaccatcc accctttcgt ttgaagagcc tgacatgcga acgtttcgaa atttaacgct
     4801 cgctatcgag gccttgttca agggcggcaa catgccgtgt gtgctgaacg ctgcgaacga
     4861 aattgcagtt tttgcgtttt tgcgaaaccg tataggcttc ctcgatataa ctgctatggt
     4921 agaacaaact atgagtaagg taccgttcat cgaacggcca agccttgaag aatactttga
     4981 cagtgacgca gaggcacgta attttgccgc ctctttgata cagttataaa gtgttctccg
     5041 tcaaacgtag tttgtgaaaa cataatcgtc cggacatcat acaacaaaac atcagcacac
     5101 gagaagcaaa ttacctttgg tcagagtata ttgtttgatt aacaaatgaa gtgttatcat
     5161 tgcaccccga aaagtgggaa tgatgatcac ggagatatat ttatcacata aaagatcctg
     5221 aaggaattga tttaaacatg accttattat ctatagactg gccgggcata ggtattaaaa
     5281 ctttacagct aattttttcc ctttcgatac ttgttacttt gcatgaactc ggccattttt
     5341 tgaccgcacg ctggttcaag tgccgtgtcg aaaagttcta cctgtttttt gacccatggt
     5401 tcagtgtctg gaaaaaaaag ataggggaaa ccatttatgg aattggatgg gtgccctttg
     5461 gcggctatgt gaaaatttcg gggatgatcg atgaaagcat ggacaaagag caactaaaac
     5521 aacccccgaa accttatgaa ttcaggagca aacccgcatg gcagcgattg atcattatgg
     5581 tggcgggtgt tataatgaat gttttgcttg ccttatttct gttcattatg atcacctaca
     5641 aatggggcga cgaatttctg ccgccgcaaa atttaacata cggagtatat gctgattcac
     5701 tggcgagaac gataggtatt caaaacggtg atctgctgct tgccgttgac gataaacctt
     5761 tcaataattt ttttactata cctgccgaca taatcctttc aaaaggcaaa actctccaga
     5821 taaaacgaaa cgggcaacca caaaatctta cgatccctga tgattttaag aacgctctaa
     5881 atcacaacaa actggccggt tttgtggagg tgcaattccc cgtaattgtg gattccgtta
     5941 ttacatccca ggcaaagttt cttgaaggac gtttgcaaaa aggggatacc gtgatcgcgg
     6001 tgaacaataa gccattccgg tattttcacg aattcgacag cctgaaaaaa tcttttgcca
     6061 ataaagttat atccctgacg atccggcgcg gccaggatac tttagttgtg aaagcacaac
     6121 ttaacgaaaa tacccaggtc ggttttcagt cagtcagccc gagcgagttg ttcggtacta
     6181 tccatcgttc ttactcgctt ggcgaatcaa tcccagttgg gatcgataaa tgcttctcaa
     6241 cattagataa gaacatcaaa ggcctccaac tgataataac cggccaggta aaagcgagcg
     6301 agtctctagg cagtgtcatc agcataggaa agctttttgc cagccaatgg gactggcgtt
     6361 cattctggtc actcacagct attctatcca tcatacttgc attcatgaac attttgccga
     6421 tccctgca
//
LOCUS       DASQJI010000841         2803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_596427,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000841 DASQJI010000000
VERSION     DASQJI010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596427"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VEV83_21920"
     CDS             complement(<1..1061)
                     /locus_tag="VEV83_21920"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYK47857.1"
                     /translation="MDTSLNPLSQPDTTAVTNFNQDTVPPVTSLSPDLLNIFNQPVPK
                     KYRISDIKVTGNNYFDQNLLLSIASLSVGDEVTLPGGDNFSKAITKLWSQNYFSDVAI
                     YITSLKDDAITVEVNVTERPRLSKFEFKGIKKSEVDDLSPKTGLVVNRVITENLKRTS
                     SDAIKKFYADKGYRNVDVSIQEIPDSSAQNSSKLVFVVDKGDKVKISQIHFVNNTVSE
                     EKLKSQLKGTKEKSHVTLYPSKDETVFNDTLKYNFHDYVHEWGFLSYTKTRELLEPYI
                     KIKPFSSAKFDQKKYTEDKEKVLDYYNSLGYRDAAIVQDTQYVAAKSNNMHIEIQLDE
                     GHKYYFGNISWSGATKYSDS"
     gene            complement(1270..2043)
                     /locus_tag="VEV83_21925"
     CDS             complement(1270..2043)
                     /locus_tag="VEV83_21925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HYK47858.1"
                     /translation="MTDGLKDMIDPTRLPQHIAIIMDGNGRWAKEKGHDRLYGHFHGV
                     ESVRNILEGCAELKIRYLTLYAFSTENWDRPKDEVDGLMELLVDTIRKEVATLNKNNI
                     KLHVIGDMNTLPVYARRELEEALIETSHNDKFNLILALSYSSRWELVNAVKNIAVDVK
                     AGKLLPQNITQDTLQGYLATSEFPDPELMIRTSGEYRISNFLLYQLAYAELYFTTTRW
                     PDFRKEHLFEAILDFQHRRRRFGKTDEQLIGQKQEPLLH"
     gene            complement(2114..>2803)
                     /locus_tag="VEV83_21930"
     CDS             complement(2114..>2803)
                     /locus_tag="VEV83_21930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6089 family protein"
                     /protein_id="HYK47859.1"
                     /translation="FIKQFNNYIGVRISGDYAFLGYSDIYSDNETQRRRNLSFNTNVW
                     EVSLSGYFNFFKFMPGVQGYKFTPYLALGVGILSYDPYAYLDGTKYYLRPLGTEGQDN
                     PNFPDRKEYSTMAISFPFTFGAKYSLNQNINVFGELGYRFTNTDYLDDVSTTYAGPEA
                     FPPDANGNPSVAFLLQDRSYETGEAIGIKGRQRGNSAQKDAYVLFHVGVSFNLSSYRC
                     PKVQNAPSNIQ"
BASE COUNT          714 a          608 c          635 g          846 t
ORIGIN      
        1 gagtctgaat acttggtcgc gccactccag ctaatatttc cgaaataata tttatggcct
       61 tcgtcgagct gtatctctat gtgcatgttg ttcgactttg cagccacata ttgagtgtcc
      121 tgcacgatcg ctgcgtcgcg ataaccaaga gagttataat aatcgagaac tttctcttta
      181 tcttctgtat atttcttttg atcgaatttg gctgaagaga aaggcttgat cttgatatag
      241 ggctctaaca attcgcgggt tttcgtataa gacaaaaatc cccattcatg cacgtagtcg
      301 tgaaagttat atttgagcgt gtcattgaaa actgtttcat cttttgaagg gtaaagcgtc
      361 acgtggcttt tttctttcgt gcccttaagc tggcttttca gtttttcttc gctaactgtg
      421 ttgtttacga agtgtatctg gctgatcttt actttgtctc ccttatcgac gacgaaaacc
      481 agcttcgaag aattttgtgc ggacgaatcg gggatctcct ggatcgacac gtcaacatta
      541 cggtatccct tgtcagcata gaatttcttt atcgcatctg atgaagttct cttgaggttt
      601 tctgtgatca ccctgtttac aacgagacct gtcttcggtg acaggtcatc aacttccgac
      661 ttctttatgc ctttaaattc aaatttcgaa agacggggcc gctccgttac gttcacttcc
      721 accgtgatgg cgtcatcctt taaagacgtt atgtagatag ctacgtcact gaaataattt
      781 tgggaccaca gttttgtaat tgctttcgaa aaattatcac ctccgggaag tgttacttca
      841 tcgcctacac ttagactcgc gattgacaat agaagatttt gatcgaaata attattgccc
      901 gtgactttta tatccgagat acggtacttc ttgggaacag gttgattgaa aatattcaac
      961 aggtcggggc tcaaagaagt tacgggcgga actgtatcct ggttaaaatt cgtaacggcg
     1021 gtagtgtctg gctgtgataa tgggttgagg cttgtatcca agcgcggttg cgtctcattt
     1081 tgtcctaatc ctatctgtgc tgacacaagg cagaaaaaaa acaggaaaca atttctgaac
     1141 gaatcgcgca tccgggtagt tggttatttc tttgaattta gtgtcaacat gatctggaat
     1201 aagctgccgg caaagctgcg gcaaattagc cggaattatt aaaagtgttt gttaaatcaa
     1261 aactgataat cagtgcaaga gcggctcctg tttttggccg atcaattgtt cgtcggtctt
     1321 accaaaacga cggcggcgat gctggaaatc caatatcgct tcaaaaaggt gctcttttct
     1381 gaaatctggc cagcgagtag tggtgaaata caattctgca tatgccagtt ggtatagtaa
     1441 gaagttgcta atgcggtact cgccactcgt gcgtatcatt aattcgggat ccggaaactc
     1501 acttgtggcc aggtaacctt gcagggtgtc ctgggtgata ttttgcggaa gcaatttgcc
     1561 tgccttcaca tcgacggcga tattcttaac agcattcacg agttcccacc tgctactgta
     1621 gctgagggca agaatgagat taaatttatc attgtggctg gtctcgataa gcgcctcttc
     1681 aagctcgcgg cgtgcataca ccggtaaggt attcatatcg ccgatcacat ggagcttgat
     1741 gttattcttg ttgagtgtgg caacttcttt ccggatggtg tcaaccaaca actccatcag
     1801 gccgtcgacc tcatctttcg gcctgtccca attttcggtg ctaaaggcat aaagggtaag
     1861 atagcggatc tttaattctg cgcagccctc aaggatgttt cgaacacttt ccactccatg
     1921 gaaatggccg tatagccggt cgtgcccttt ttcttttgcc cagcgcccgt tgccatccat
     1981 tatgatcgct atgtgctgtg gcaatctcgt tgggtcgatc atgtccttta aaccatccgt
     2041 cataactctc aaaacgccaa agttaataaa ttaagacggt ggctgaatta ttaaatcgct
     2101 aaagaatgaa tggctattga atgtttgaag gtgcgttctg cactttcggg caacgatagg
     2161 agctgaggtt gaacgacaca cctacatgga ataaaacgta tgcgtccttc tgtgcactgt
     2221 tgcctctttg cctgcccttg ataccgatcg cttcaccggt ttcataactg cgatcctgca
     2281 aaagaaatgc aacgctcgga ttgccgttcg catcaggcgg aaatgcttca ggcccggcgt
     2341 aagttgtact tacatcgtcg aggtaatcgg tattggtaaa gcgatagccg agttccccaa
     2401 acacgtttat gttttgatta aggctatact tagctccaaa ggtgaacgga aaagatattg
     2461 ccatcgtgct gtactctttt ctgtccggaa agttgggatt gtcctggcct tcggtgccca
     2521 atggccgtaa ataatatttt gttccgtcga gataagcgta aggatcatac gacaaaatac
     2581 caacaccaag cgcaaggtat ggtgtgaatt tatagccctg cactccaggc atgaatttga
     2641 agaaattaaa gtagccgctc agagaaactt cccaaacatt ggtgttgaag ctgagattgc
     2701 gtcttctctg tgtttcatta tcgctataga tgtcactgta accgagaaat gcataatcgc
     2761 ccgagatccg cacgccgata taattattaa attgtttgat gaa
//
LOCUS       DASQJI010000842         2434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2748065,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000842 DASQJI010000000
VERSION     DASQJI010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2748065"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VEV83_21935"
     CDS             <1..338
                     /locus_tag="VEV83_21935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47860.1"
                     /translation="MKEVTLPTSKFPFVDRGEWGHQTQWVNACKQGYGAYTSSSFDKS
                     GPLTETVLMGNLAVRSYNYSENDSKGKATYPGRKQLLWDGENMRVTNFEPANQFVKRK
                     YRGNYQLQI"
     gene            complement(370..1158)
                     /locus_tag="VEV83_21940"
     CDS             complement(370..1158)
                     /locus_tag="VEV83_21940"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HYK47861.1"
                     /translation="MLKKEQQYEYIDKRCENATLAVKNFGENKDHEELHKLRVEIKKL
                     KACAAFTSKLAGEHYKKKLRPVSEIFKKAGEIRTARLNLATLKKYRIRATAFRQGQLA
                     IGENVAQQFNTSSGRYTQVIKSTCDELRDDCGDISNKKIREFYSKKIELLSMFFTEKF
                     DEGKLHERRKIIKRLVYVDSLLPDKLKAELAINIPYLDTLQDIIGKWHDALVIIDLLN
                     KAGTGEQKTALLLREKEGLLQAVKLLANHFEKNISIKKTLYTGP"
     gene            1339..2235
                     /locus_tag="VEV83_21945"
     CDS             1339..2235
                     /locus_tag="VEV83_21945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HYK47862.1"
                     /translation="MDFVDYYKTLGLDKNANEEEIKKAYRKLARKYHPDLNPNDKEAN
                     RKFQQINEANEVLSDPEKRKKYDQYGKDWKHAEEFEKARQSQARSHDWEDYTYSGGQH
                     EGDFSDFFESLFGKRRSARSDVKFRGSDYQSELHLALSDVFHTHKQVLTVNGKNIRIT
                     IPAGVEDGQVIKLKGHGGPGVNGGPNGDLFITFVIAPDAKFKRLGNDLYTTVELDLYT
                     AVLGGEVTMDTLSGKIKLKVNPGTQNGSTIRLKGKGFPVYKKEGEFGDLFVTWQVKLP
                     TRLNEKQKELFRQLAESENRTQ"
BASE COUNT          720 a          490 c          553 g          671 t
ORIGIN      
        1 tgatgaaaga ggttaccctt ccaacatcta aatttccctt cgttgatcgc ggcgaatggg
       61 gccatcaaac gcaatgggta aatgcatgca agcaaggtta cggcgcctac accagctcgt
      121 cgtttgacaa gagcggcccg cttaccgaaa cagtgctcat gggcaatctt gctgtgcgca
      181 gttataatta cagcgaaaac gattccaagg gcaaggcgac ttacccgggt cgtaaacaat
      241 tgttatggga cggagagaat atgcgcgtta cgaattttga gccggcaaac cagtttgtaa
      301 aaagaaaata cagagggaat tatcaacttc aaatatgatc atctgatggt tgcagattcg
      361 aatcgtatgt caggggccag tgtacaaagt ttttttgatc gatatgtttt tttcaaaatg
      421 gtttgcgagt aatttgaccg cttgcaacaa cccttctttt tcacggagca gtaatgccgt
      481 tttttgttca ccagttccgg ctttgttcag caggtcgatt attacaagag catcatgcca
      541 cttgccgata atatcctgga gcgtgtccag gtaaggaata tttatcgcta attccgcttt
      601 caatttatca ggcagcaagc tgtctacata aacaagcctc tttatgatct ttcttctttc
      661 atgcagcttc ccctcatcga atttttctgt aaaaaacata gaaagcagtt cgatcttttt
      721 tgaatagaac tcgcgtattt ttttattgct gatatcacca cagtcatcgc gcaactcatc
      781 gcacgtagat ttgataactt gtgtatatcg cccggaggaa gtgttgaatt gttgagccac
      841 attttcgcct atcgcgagct gtccctgcct gaacgcagtt gcgcgaatac ggtatttttt
      901 taacgttgcc aggttcaggc gtgcggtgcg aatctctccc gccttcttaa agatctcgct
      961 gacgggtcga agtttttttt tgtaatgctc gcccgccagt tttgaggtaa aagcggcaca
     1021 tgcttttagc ttctttatct ccaccctgag cttgtgtaat tcttcatgat ccttattttc
     1081 accaaaattc tttacagcga gcgtcgcgtt ctcgcagcgc ttatctatgt attcatattg
     1141 ctgttctttc ttgagcattc gcttgataaa attagtttct tggagtttct tctttgctgc
     1201 ctttgggccg gtaaatttaa cgagttaaaa atcgtgtttc attgaaatcg aaattgaagg
     1261 aggagcaggg gtataaaaat tgtatatctt catttgtaac acaaaatttc gttgccgcac
     1321 ggcgcgcaaa acacaattat ggatttcgta gactattata aaacgttggg ccttgataag
     1381 aatgcaaatg aagaggaaat aaagaaggct taccgtaaac tggcgcggaa atatcatcct
     1441 gacctcaatc caaacgataa ggaagcgaac cggaaatttc agcaaataaa tgaagcgaat
     1501 gaagtattga gtgatccgga aaaacgaaag aaatatgatc agtacgggaa agactggaaa
     1561 catgctgaag agtttgaaaa agctcgccaa tcgcaggcac gatcgcatga ttgggaagac
     1621 tatacttatt ccggcgggca gcatgaaggc gacttttcgg atttttttga atcattgttt
     1681 ggaaaaagaa gatcagccag gagcgatgta aaattccgtg gcagcgacta ccaaagcgaa
     1741 ctgcatttgg cattgagcga tgtttttcat acgcacaaac aggttttgac ggtaaacgga
     1801 aagaacatcc gcatcaccat tcctgcgggt gtagaagatg gccaggtgat caaattgaaa
     1861 ggccacggcg gcccgggtgt aaatggcgga ccaaacggtg atctctttat cacatttgta
     1921 attgcacccg atgcaaaatt taagaggctg ggcaatgacc tttacacaac ggtggaactg
     1981 gatttgtaca cagcagtgtt gggcggtgag gtcaccatgg atacactgag tggaaaaata
     2041 aaattgaaag tgaatccggg cacgcagaac ggaagtacga tacgcctgaa gggaaaaggt
     2101 tttcctgtct acaaaaaaga aggagaattt ggggacttgt ttgtgacctg gcaggtaaag
     2161 ctgccaacaa ggcttaatga aaaacaaaaa gaattgttca ggcagttagc cgaatcggaa
     2221 aatagaaccc agtaaaaaac acacgttttg gaaactaaaa gatcatggta tgctcgaaga
     2281 aaatatgata cctgcaaatg aatgttgtct tcattacaat atagaattat cattcatcaa
     2341 tcaccttagt gactacggcc tgatagagct tgctttcata gaacagcagc aattcattcc
     2401 tgcagaccag ttgcaacaac tggaaaaatt catc
//
LOCUS       DASQJI010000843         6699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1981034,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000843 DASQJI010000000
VERSION     DASQJI010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6699
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1981034"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2247)
                     /locus_tag="VEV83_21950"
     CDS             complement(<1..2247)
                     /locus_tag="VEV83_21950"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47863.1"
                     /translation="MFSNYFKIAWRNLFRNKGFSVTNILGLTIGMTCTALILLWMQDE
                     LTYNKFHQNYNNIYHLMANRDFNNQVFTDENMVLPFAQSIQQQVPQVKYAVVTTHRQP
                     HILTYGEKKLKEQGYTAGDHFFDMFSWKFIKGNAATALPDPYALVLTKSTAKALFGNA
                     DPINKVVRIDDDYDAKVTAIVADVPGNSTLQFDFVNAFNYDNDYLKQAMTNWQNSSWD
                     VYVQTVPGANMQSVDKKINEIKQQHDPSDKKISTYFNFPMSKWRLYSDFKDGKNVGGM
                     IEYVRLFGIIALIILLIACVNFMNLSTARSEKRAKEVGVRKTLGSDKKQLVLQFFFES
                     MILALIAFVFSMVATYSLLPAFNTLVDKHLALDFGQPAFWVGSIAVIIFTGVVAGSYP
                     ALYLSSFSPARVLKGTILQGKAAALPRRVLVVAQFVISILLISATIIVSQQIQHIRNR
                     DIGYDPNNLIMISSTQDIQKNFAVIKQDLLKTGLISSVTRTFSPITEIWWKMPGPDWD
                     GKPANANIIFAGFSGDVDLSKTLGVKMLRGRDFSGMPSDSNAVLLNKAAVEVMGLKNP
                     IGTQLRYGRHLTVIGVTDNVIMESPFKPVDPMIVFFDPNGANSISIRLNASVQPQKAL
                     TSIEPIFKRYNPAYPFDYQFADAEFGKKFLTEELISKLTNIFAGLAIFICCIGLAGLA
                     SFTIEKRIREIGIRKVLGASVQQLLMLISKEFLKLVLIAFIIAVPLTWWLMNDWLQKY
                     TYRIDISLW"
     gene            complement(2322..4775)
                     /locus_tag="VEV83_21955"
     CDS             complement(2322..4775)
                     /locus_tag="VEV83_21955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYK47864.1"
                     /translation="MLKTYFKIAWRNFKHNKIFSFINIIGLSVGLACCMLITLYILNE
                     LDYDKYQNNADNIYQIGTTFIQQGKEESMPNTPAPMGSTMKMEFPEVQRSARLMGLFA
                     EDKTLLQYRDQSGTPKSFYETKGALADSTFFRIFTYNFTEGNPATALDDPNTIVLSEE
                     IARKFFGGQPALNKVIHISSSTNGDHDFRVTGVFKPINKPSHIDARFFMSLMGGSIEQ
                     YMREHANDLATNNMFFTYLELKPGSDAKKLQAKFPAFMDKYAGKDLKAMGFDKRQFLV
                     ALKDIHLHSGMDQNVTPPGSMTYLYILASIAFFTLMIACINFMNLSTARSSKRSAEVG
                     IRKVLGAEKNSLVQQFLGESIFMSLIAFVIALIIAEIMLPAFNTVSGKNLTLSFPGDL
                     LVIAAFLLLSVITGLFAGSYPAFYLSSFKPIKVLKGRFSNSLAAVSLRKGLVIFQFII
                     SVVLIIASVVIANQMHYLRTADLGFDKDQQIVIPLRSETAKNSYTALRTELRKQSQVR
                     DAGASLYYPGIFNPSDNLFYKEGGNMNTGVRTRMNWIDPSFLQTLNIKPLAGRLFRDD
                     FPADTNFRIILNESAIKSIGFKSPQEAVGKKVFFDWQGTHYGFEVIGVVKDFHYENLH
                     MPITPYGFQLNNVPQYNYLVVHAKAGDIKPLLTSIGSIWHNLNPTEPFEYSFLDEDFQ
                     KNYQAETRLSAIVGYFTCIAILISCLGLFGLATFSAEQRTKEIGVRKVLGASVTSIVA
                     LLSKDFLKLVGIAVLIASPLAWYVMNKWLQDFAYRVNINWAVFVITTLAAMFIALFTI
                     SFQAIRAAIANPVQSLRTE"
     gene            complement(5087..6193)
                     /locus_tag="VEV83_21960"
     CDS             complement(5087..6193)
                     /locus_tag="VEV83_21960"
                     /inference="COORDINATES: protein motif:HMM:NF033679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNRLRE domain-containing protein"
                     /protein_id="HYK47865.1"
                     /translation="MKRFNTPILCCVVISFVVCSCQKTPDSQPGSDNMASSNSAGKLS
                     VASQTLSIRPGPGMGQDVYVYKEAGVKASNWNNVPELNASVWVTNGVEGRSSSFIRFD
                     GLSKIPIAATVISAKLYLYGLPSSVSISQGNYGDNACFIRRVIDPWNEATLKYSKDGL
                     PKSTTDGQAILPASTSQWNYNGVVDVTAMVAHMVGYPTENFGFSMSLVTPKKYRAIVF
                     GSSEQSDRSLRPKLVVVYDSVSNPLAGTYLWNFHRWDAPDSASGYRADLSFDGESTVF
                     SPLSASQIEVASGYYIQPRYEITFTNNGGLLTNFHVSLNADDLALMASAGVVVTAGPS
                     IVWADPITKNFEFVYSVTAGGASYRYILDNYYNP"
BASE COUNT         1847 a         1507 c         1470 g         1875 t
ORIGIN      
        1 ccataagctg atatctatcc tgtaagtata cttctgcagc cagtcgttca tgagccacca
       61 ggtaagcggc accgctatta taaaagctat taaaaccaac tttagaaatt ctttggagat
      121 aagcattagc aactgctgca cggatgcgcc caacactttc cgaataccga tctcacgaat
      181 acgtttttca atagtaaatg aagccaaacc tgcaaggccg atgcaacaaa tgaagatcgc
      241 cagtcccgca aaaatatttg tgagtttgct gatgagttct tcagtcaaaa atttcttgcc
      301 gaattccgcg tccgcgaact gataatcgaa tggataagca ggattgtatc ttttaaagat
      361 cggttcaata gaggtcaaag ccttttgtgg ctgaacggat gcgtttaacc tgatgctaat
      421 tgaattggct ccgttaggat cgaaaaatac gatcattggg tccacaggtt tgaaaggcga
      481 ctccataata acattatccg ttaccccgat cactgttaaa tgtcgtccgt agcgcaattg
      541 tgttccaatc ggatttttca gacccatgac ttcaacggcc gccttgttca atagcacggc
      601 gtttgagtca gacggcatcc ccgagaaatc tcttccccgc agcattttca ctccaagtgt
      661 ctttgaaaga tcaacgtcgc cgctgaaacc tgcaaaaata atatttgcat ttgccggctt
      721 gccgtcccag tcagggccgg gcatcttcca ccagatctcc gtaatgggcg aaaaagttct
      781 cgttacgctg cttatcaagc cagtcttcaa cagatcctgt ttgatcaccg caaagttttt
      841 ctggatgtct tgtgttgaag atatcatgat caggttattc ggatcatacc cgatgtcgcg
      901 gttcctgata tgttgtattt gctgagagac gatgatcgtt gcggaaatca gcaagatcga
      961 gatcacgaac tgcgctacca ctaaaacgcg ccgcggaagt gcagcagctt tgccttgcag
     1021 gatcgttcct tttaaaactc tggccgggct aaacgatgaa aggtataggg cgggataact
     1081 gcccgcaaca acgccggtaa aaattatgac agcaatagaa cccacccaaa atgccggctg
     1141 accaaagtct agcgcaaggt gtttatcgac aagcgtgttg aaggcgggaa gcagtgaata
     1201 agttgcaacc atcgaaaaaa caaacgcaat taatgccagt atcatcgatt caaaaaagaa
     1261 ctgtagtacc agttgctttt tgtcggaccc caaagttttt cgaacgccaa cttcttttgc
     1321 tcttttttcc gaacgcgcgg ttgaaaggtt catgaagttc acgcaagcta tcagcagtat
     1381 gatcagcgcg atgatgccga acagcctaac atactctatc atgccaccca cattctttcc
     1441 atccttgaaa tcgctgtaca gtctccattt gctcatgggg aaattgaagt atgtgctgat
     1501 ctttttatca cttggatcat gttgttgctt tatctcattg atttttttat ctactgattg
     1561 catgttggcg cccggcactg tttgaacata aacatcccac gacgaatttt gccagttcgt
     1621 catcgcctgc ttcaggtagt cattgtcata attaaaagca ttaacgaaat cgaattgtaa
     1681 cgtcgagttg cccggcacgt cggcaacgat agctgtcact tttgcatcat agtcatcgtc
     1741 gatgcgcact actttgttga tcgggtcggc gtttccaaac aaagcttttg cagttgactt
     1801 agtcagaacc agggcataag gatcaggcaa cgctgtggct gcattgccct ttatgaattt
     1861 ccatgagaac atgtcgaaga agtgatcacc cgcagtgtag ccctgctcct tcagtttctt
     1921 ttccccgtag gtaagaatat gcggttgcct gtgtgtggta accacggcat attttacctg
     1981 cggaacttgc tgttgtatgg attgtgcaaa tggcagaacc atattctcat cagtgaacac
     2041 ctggttgttg aaatcgcggt ttgccatcag gtgataaata ttattataat tctgatggaa
     2101 tttgttatag gttaattcat cctgcatcca caacaggatg agtgctgtgc aggtcatgcc
     2161 aatggtgagt cctaaaatat ttgtgacgga aaatccctta ttcctgaata gatttctcca
     2221 cgcgatcttg aaatagttgc tgaacatctt tcgatttacg atttacgatt ttagattaca
     2281 atttgcgatt gcagatttta gattgcagat tttccaatcc tttattctgt tcttaatgat
     2341 tgtaccgggt tggctatcgc tgcgcgaatt gcctggaagc ttatcgtgaa caaggcaatg
     2401 aacatagctg ccaacgtggt tatcacgaac acagcccagt tgatgtttac gcggtatgcg
     2461 aaatcctgca accatttgtt catcacgtac caggccagcg gcgacgcgat gagcactgca
     2521 ataccaacca gcttcaaaaa atcttttgat aacagcgcaa cgatgcttgt aacacttgcg
     2581 cccaacacct ttctaacccc gatctctttt gtgcgttgct cagcactgaa tgttgccaag
     2641 ccaaacaatc ccaaacatga aatgaggata gcaatgcagg taaagtatcc aacgatcgct
     2701 gacaaacggg tctccgcctg gtaatttttt tgaaaatctt catcgaggaa actgtattca
     2761 aaaggttccg ttgggttgag gttgtgccag atacttccga ttgacgtaag cagcggcttt
     2821 atatcgcctg cctttgcatg cacaacgaga taattgtatt gcggtacatt gtttaattgg
     2881 aaaccatagg gtgtgatcgg catgtgcaga ttttcataat gaaaatcttt aacaacgccg
     2941 atcacctcaa agccgtaatg tgtcccctgc cagtcgaaaa atactttttt tccaacagcc
     3001 tcctgcggcg acttgaaccc aatacttttg atagcactct cattcaaaat gatgcgaaag
     3061 tttgtgtcag ccgggaagtc atcgcggaac aagcgtcccg caagaggttt aatgttgagc
     3121 gtttgcagaa agctcggatc tatccaattc atccgggtac gtacaccagt attcatattt
     3181 ccgccttctt tataaaaaag gttatcactt ggattgaaaa tgccggggta ataaagtgaa
     3241 gcgccggcat cacgaacctg ggattgtttc cgtaattcgg tccttaatgc agtgtatgaa
     3301 tttttcgcgg tttcgctgcg cagcggaata actatctgct ggtctttatc aaagccgaga
     3361 tccgccgtgc gcaaatagtg catctggttc gcgataacaa cggaagcaat gatcagcacg
     3421 accgaaataa tgaattgaaa aatcaccagc ccttttctta atgaaaccgc ggcgagcgaa
     3481 tttgaaaacc tgccttttaa aactttaatc ggtttaaatg atgataaata gaatgccggg
     3541 tagcttccgg cgaacaaacc tgtaatgaca gacagaagca gaaacgccgc gatcaccaaa
     3601 agatcaccag gaaaagagag cgtaaggttt tttcccgaca cagtgttgaa tgccggtaac
     3661 atgatttctg caatgataag cgctattaca aaagctatca ggctcatgaa gatggattcg
     3721 cccaaaaatt gttgcacgag cgaatttttt tctgcaccca atacttttcg aataccaact
     3781 tccgccgagc gttttgaaga acgtgcggtt gacaggttca tgaaattgat gcacgcgatc
     3841 atcaacgtga agaatgcaat ggaggcaaga atgtacaaat aggtcatgct tcccggcggt
     3901 gtcacgtttt gatccatgcc cgaatgcagg tgaatgtctt tcaatgcaac gaggaactgt
     3961 ctcttatcaa accccattgc tttcagatct ttgccggcat atttatccat gaaagccgga
     4021 aattttgcct gaagtttttt tgcatcgctg cccggtttca attccaggta agtgaaaaac
     4081 atgttgtttg tcgccaggtc gttcgcgtgt tcccgcatgt actgctcaat gcttccgccc
     4141 atcagcgaca taaaaaatcg tgcgtcgata tggctgggtt tgttgatcgg tttaaacacg
     4201 cctgttaccc ggaaatcgtg atcgccattt gtgctgctgc ttatatgaat cactttattc
     4261 agcgcaggct gaccaccaaa gaattttctt gcgatctctt ctgataaaac aattgtgttc
     4321 ggatcgtcga gtgcggtagc tggattgcct tcggtgaaat tgtaggtaaa tattctgaag
     4381 aacgtggaat cagccagggc gccttttgtt tcgtagaacg attttggggt gccgctttga
     4441 tcgcggtact gtaataaagt cttgtcttca gcaaacaatc ccattaatct tgctgaacgc
     4501 tgaacttccg gaaattccat tttcatcgtg gagcccatgg gcgcgggtgt attgggcatc
     4561 gattcctctt tcccctgctg tatgaaggtt gtcccgattt gataaatatt gtctgcgttg
     4621 ttttgatatt tatcataatc gagctcattt aaaatataca gcgttatcag catgcagcag
     4681 gcaagtccca ccgacaggcc aatgatgttt ataaacgaga atatcttgtt gtgcttaaaa
     4741 tttcgccacg cgatcttaaa ataggttttc agcatataaa ttcagattaa cgaacatagt
     4801 tctacagagc gtttaaaggc tttcaacgtt tatgccattg ttggaacccg ttgtacataa
     4861 ggattttaga tggtaaacgg cggtataggt gtacggattc gtacagtgcc tgttgcgtcg
     4921 ccggacatgt tatagtttga ggtttgaagt ttgaggtttg aggttacctt cggcgttgac
     4981 caaaacaagc ttctaccagc agcgtttttg ttttctccgg aaaggttctt ctaaaaaaac
     5041 gatcctggag gttttcgaga aggtttgatt catcaaaaaa ttgcggctat gggttgtaat
     5101 aattatcgag gatataccta taactggcgc caccggcagt aacactataa acgaactcaa
     5161 aatttttcgt aataggatcg gcccacacga tactcgggcc tgcagttact actacacccg
     5221 cacttgccat caaagcaaga tcgtcagcgt ttaggctaac atgaaagttg gttaataagc
     5281 cgccattatt ggtaaacgtt atttcatatc tgggctgaat atagtatccg cttgcaactt
     5341 caatttgcga tgctgataac ggcgaaaaaa cggtcgattc accatcgaaa gacaaatcgg
     5401 ctctgtaacc ggaagcactg tccggcgcat cccatcgatg gaaattccag aggtaggtac
     5461 ctgccaaagg attacttaca ctgtcataaa ccactacaag tttgggtcga aggcttctat
     5521 ccgattgctc tgaactgcca aacactattg cgcgatattt ttttggggtg actaaactca
     5581 ttgaaaagcc aaaattttcg gttggatatc caaccatatg cgcaaccatt gcagtaacat
     5641 caacaacacc gttgtaattc cattgactcg tggatgccgg caagatcgcc tgcccgtcag
     5701 ttgtagactt tggcagacca tcttttgagt acttcaaggt agcttcattc cacggatcta
     5761 taactctccg aatgaaacaa gcgttatcgc cataattacc ctgggaaata cttactgaag
     5821 aaggcaagcc atacaaatac aattttgcac ttataaccgt cgccgcaatc ggtattttgg
     5881 agaggccgtc gaatcttata aacgagctcg agcgaccctc gaccccgtta gttacccaca
     5941 cgcttgcatt taattcagga acattattcc aattacttgc tttaacgccg gcttctttat
     6001 atacgtatac gtcctgtccc ataccagggc cgggacgaat gcttaatgtt tggcttgcaa
     6061 cggagagttt accggctgaa ttcgaagaag ccatgttatc agaaccaggc tgagagtcag
     6121 gagttttttg gcaactgcac acaacaaatg agatcacgac gcagcaaaga atgggtgtgt
     6181 tgaaacgctt cataaaaatc gtttttgagg atgcacattg ggtacgagtg cttgacaaat
     6241 ctaaataaac gaaattgaga atgcggggtt ttctttctga ttctccaaaa gatctttgca
     6301 ctatgttacc gggatcacaa tgaaagaaaa ctgtagggca atgattgcgt aagaaacgat
     6361 ctgataagat ttgaacgttt ggaagcaatt acttttccca agcgacttct tttgcacggg
     6421 ttgttgaccg cgccgtcgaa cgatttaaaa aaaattgatt gaagctaaag caagtaggaa
     6481 atggctatgc atgcaaacag ccaaagatcc tgtcctccta caagcgtttt cgcaggctat
     6541 tccgtcctca gcgaccgtac gggatttgca attgctgcgc gaatcgcctg ggtacttacc
     6601 gttatcagcg caatgcacaa tgctgcaaca ccggccgcga caaacatcca ccattcaacg
     6661 ttgatgcgat acgcgaaatc ctgtaaccaa ctgcgcatg
//
LOCUS       DASQJI010000844         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2289799,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000844 DASQJI010000000
VERSION     DASQJI010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2289799"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VEV83_21965"
     CDS             complement(<1..316)
                     /locus_tag="VEV83_21965"
                     /inference="COORDINATES: protein motif:HMM:NF016207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HYK47866.1"
                     /translation="MYDLPHFKAENFQEVLAFMHAHPFITLCGCGQDNHPVATQVPVI
                     IEEKDEKIFLHAHVMRKQDHTVAFSHNPNVLAIFSGAHTYVSAGWYENKQTASTWNYQ
                     AVH"
     gene            complement(399..>1801)
                     /locus_tag="VEV83_21970"
     CDS             complement(399..>1801)
                     /locus_tag="VEV83_21970"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYK47867.1"
                     /translation="VKENNLINNPGVAIAPLRFLASDELMGRDPFRPEINIAARYISE
                     QFRSFGLKQVSGTNDYFQTFSMNVVVPGSKGSISINGTNYEVAKDFVQAKGAGDVSLT
                     APAIFVGDETEIDFDKVDVKGKIVVTNRGAGGSTGNAKRTENRKALHDRGALALIERY
                     SPSLPAWGQLQRYVTKPRVQAPDDVMPMFIIKDDGAQLETLAPGTEATIGVTGNMTRD
                     VPAKNVMGWVEGTDPKLKNQFVVLSAHYDHLGVAPKPKVEEGKLDSIYNGARDNAIGT
                     TAVIDAARYFAQHPPKRSVLFIAYTAEELGLVGSQYFSENPPIPFNQLVYNLNIDNAS
                     YNDTTIVSVVGLGRTSADNDIKNACAAYGLTAMPDPAPEQGLFDRSDNVSLAIKGIPA
                     PTFGLGVRKFDSTITNRYHQLSDEVGNFNLSYAMKYINAFILAAKNIADNKTQPTWVA
                     GDKYEAAWKELFKKDL"
BASE COUNT          444 a          455 c          376 g          526 t
ORIGIN      
        1 catgtactgc ctggtaattc caggtacttg ctgtctgctt attttcatac cagcccgcac
       61 tcacatatgt atgtgctccc gaaaatatcg ccagcacgtt tggattatgg ctaaacgcca
      121 ccgtgtggtc ctgtttacgc attacatgcg catgcaaaaa gatcttctca tccttttcct
      181 caattataac agggacctgt gttgcaaccg ggtgattgtc ctggccgcac ccgcacagag
      241 ttatgaaagg atgtgcatgc atgaatgcaa gcacttcttg aaaattttca gctttgaaat
      301 gagggagatc gtacatgcaa ccgttttgct tttataaaga aaaaatttat cgcatctaat
      361 gtaaacaatc atgcacaact aaagttatta cattgatcct acaggtcttt cttgaacaac
      421 tctttccacg cagcctcata tttatcgccg gctacccatg taggctgtgt tttgttatca
      481 gcaatatttt ttgccgcgag gataaaagcg ttgatatact tcatcgcgta gctcaagttg
      541 aaattaccta cttcgtcgct aagttgatgg taacgattcg tgatcgttga atcaaacttt
      601 ctcacgccta aaccgaaggt gggtgcaggt atccctttga tggcaaggct tacattgtcg
      661 cttctatcaa acaagccttg ttccggtgcc ggatcgggca tcgcagttaa tccgtacgca
      721 gcacacgcat tcttaatatc attatcggcc gacgtcctgc cgaggccgac gactgatacg
      781 atcgttgtgt cattataact cgcattatcg atgttcagat tatacacaag ttgattgaaa
      841 ggaataggcg gattctccga aaaatactgg ctgcctacca aaccgagttc ctcggcagtg
      901 tatgcaataa aaagcaccga ccttttcggc ggatgctgcg caaaatatct cgcagcatca
      961 atcactgctg ttgttccgat cgcattatcc cttgctccat tatagatgct gtcgagtttc
     1021 ccttcttcca ctttgggttt cggtgccacg cctaaatgat cataatgcgc agataataca
     1081 acaaactggt tttttaattt aggatctgtg ccttctaccc atcccatcac attttttgca
     1141 gggacatccc ttgtcatgtt acctgttacg ccgatcgtgg cttcagtgcc gggagcgagc
     1201 gtctccaatt gtgcgccgtc gtcttttata atgaacatgg gcataacgtc atcaggcgcc
     1261 tgaactcttg gcttcgttac ataacgctgt aactgacccc atgcaggcaa cgaaggcgaa
     1321 tagcgctcta tcagcgccaa cgcacccctg tcatgcagcg cttttctatt ttcggttcgc
     1381 tttgcatttc ccgttgaacc gcccgcgccc ctgttagtaa ccactatttt tcctttgaca
     1441 tcaaccttat caaaatcaat ttccgtttca tctccaacaa agatcgcggg cgcagttaaa
     1501 gagacgtcgc cagcaccttt tgcctgcacg aaatctttgg caacttcgta attggtgccg
     1561 ttgatcgaga tagatccttt cgaacctggt acgaccacat tcatactgaa ggtttggaaa
     1621 taatcgtttg taccactcac ttgtttgaga ccgaaactgc ggaattgttc actgatgtac
     1681 cgggcggcta tgttgatctc cggccgaaaa ggatcgcgac ccattaactc atctgatgca
     1741 agaaacctta gcggcgcaat ggccacaccg ggattgttga tcaggttgtt ttctttaacc
     1801 g
//
LOCUS       DASQJI010000845         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_294454,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000845 DASQJI010000000
VERSION     DASQJI010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294454"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..1686)
                     /gene="recN"
                     /locus_tag="VEV83_21975"
     CDS             complement(4..1686)
                     /gene="recN"
                     /locus_tag="VEV83_21975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HYK47868.1"
                     /translation="MLKRLVIQNYAIINSIEIDFSSHFNIITGETGAGKSILVGALSL
                     VLGERADSSVLLQKDKKCFVEGFFSAENRPDVLQFLEANDFSGDDEIVLRREIAANGK
                     SRGFINDMPANLQQLKTLTSLLVDLHQQFDTLELGDSDFQREVLDALAGNEVLVAEYA
                     GTYKHWRQSEIELQKLLSQKNNFQKELDYNQFLFDELNDASLKEDELEDLDAELQVLS
                     NAEEIKNALSAAVYDLKESEQPILQLIKQMITRLHGFSSINKDLSQLVDRLQSSQIEL
                     QDITHELEALNDAVNYDAQRINFINERLMLGYRLQKKHGVKSTSELLAIKDELERKLQ
                     AVLSIDEAIISTEKKFSDQKTQLEKIANELSARRSKAIPLFEKNVNSLLHKVGMPNAA
                     IKVSLTPSEFNPYGSDTIEFLFDANLPATGAKSSHWEPLKKIASGGELSRLMLCIKSL
                     VAEKINLPTLIFDEIDTGISGEAAKQVGIILKQISAKRQVISITHQPQIAGKADTHFY
                     VYKHVKNDAIQTQIRLLKKDERIQAIAQMLAGEPPTAAAIENAKEMIASSGS"
     gene            1928..>2638
                     /locus_tag="VEV83_21980"
     CDS             1928..>2638
                     /locus_tag="VEV83_21980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47869.1"
                     /translation="MRKALFFLSLIAGILQMSCNTGDAGRKQTVNAILGDVSFIRKFG
                     HQPDARTDEDLRIRTHLEYVEDLLRHKDVSNLSPELRQKRKHSLDLLHDYLTTGVFPR
                     NYDYKDRRKPCFIDKDNRICAVGYLIEHTAGRRFAEDINNKHKYDAILAMNDDMVDSW
                     ISSSGLSKEECAMIQPTYGPPPASSYNYISPAYGISSSLLGGVNLSLNTLNAVQLSKG
                     ANNKTIAIVGLITGAGQTI"
BASE COUNT          691 a          581 c          566 g          800 t
ORIGIN      
        1 cttttacgat ccagagcttg ctatcatctc ctttgcattt tctattgctg ccgctgtggg
       61 cggctcgcca gccagcattt gggcaatggc ctggatgcgt tcgtcttttt tcaaaaggcg
      121 gatctgtgtt tgtatcgcat cattctttac gtgtttatac acgtagaaat gtgtatctgc
      181 tttgcccgcg atctgcggtt gatgcgttat cgagatcact tgcctctttg ccgatatctg
      241 ctttaagatg attccaactt gttttgcagc ctcaccggaa atacctgtat cgatctcgtc
      301 aaagatgagc gtaggtaaat tgatcttttc tgccacaagc gatttaatgc aaagcatgag
      361 cctgcttaat tctccgccgc tcgcgatttt cttgagaggt tcccagtggc tgctttttgc
      421 gcctgttgca ggtaagttgg cgtcaaacaa aaattcgatc gtatcactgc catacggatt
      481 aaattctgat ggtgtcaacg aaacttttat tgccgcatta ggcattccta ccttgtgcag
      541 taatgaattt acattttttt caaacagcgg aattgcctta ctgcgtcgtg cagaaagttc
      601 gttcgcgatc ttttccagtt gtgtcttttg gtcactgaat tttttttcgg ttgaaataat
      661 agcttcgtca atgcttaaca ctgcctgtag ttttcgctca agctcatctt ttatcgcaag
      721 tagttctgac gtgcttttta cgccgtgttt tttttgaagc cgataaccca gcattaagcg
      781 ctcattaata aaattgatgc gctgcgcatc gtaattcacc gcgtcgttca gtgcctcgag
      841 ttcatgagtg atatcctgca actcgatttg actactctgc aaacggtcaa ccagttgaga
      901 aagatccttg ttgatggagc tgaaaccgtg caggcgggtt atcatttgtt tgatgagttg
      961 cagtattggt tgctcacttt ctttcagatc atacacagcg gcactcaatg cgttttttat
     1021 ttcctcagca ttactcagta cctgcaactc cgcatcgaga tcttccaact cgtcttcctt
     1081 caatgaagca tcgttgagtt cgtcaaataa gaactggtta taatcaagct ctttttgaaa
     1141 attatttttt tgcgacaaaa gcttttgaag ttcaatttca gattgccgcc aatgtttgta
     1201 cgtgccagcg tattctgcaa cgagtacttc gttgccggcc aacgcatcga gtacctcgcg
     1261 ttgaaaatct gaatcgccca actcaagcgt atcgaattgt tgatgcagat ccaccagcaa
     1321 tgaagtcaac gttttcaatt gttgcaggtt ggcaggcata tcgtttataa atcctctcga
     1381 ctttccgtta gcagcgatct ctcttctcaa tacgatttca tcgtcgcctg aaaaatcatt
     1441 tgcttcgaga aactgcaata cgtccggcct gttttccgct gaaaaaaatc cttcgacgaa
     1501 acattttttg tctttttgaa gaagcactga gctatcagct cgttcgccga ggaccaggct
     1561 gagggctcct accaaaatac ttttgccggc acctgtttcg ccggttataa tattaaagtg
     1621 ggaagagaag tctatttcaa tggaattaat gatcgcatag ttctgtatga cgagccgctt
     1681 gagcattgag gcaaattaaa taaataaaaa gctccggcag cctcattttt gtcacctggt
     1741 ttgcggccat gaaaaggtgg ccttagcggc gcgaaacttg aaggtcaaaa aaaatcaaat
     1801 cctccggatt tcacgaacgg ctcgctattt tgcgacactc actttttgaa ggttttaccg
     1861 gatgtaaaaa atgacggtgc ctatgtgcaa cggaaatgtt ttaataaatg tcaaagcaaa
     1921 aaaacgaatg agaaaagctc tgttcttctt atcgctgata gctgggattt tacagatgag
     1981 ttgcaacaca ggcgatgctg gccggaagca aacagtaaac gcaattctcg gtgacgtgag
     2041 cttcattcgc aaatttgggc accaaccgga tgcacgtacc gacgaagatc tgcgaatacg
     2101 aactcatctt gagtatgtag aggatctttt gcgacacaag gatgtatcta acctgtctcc
     2161 tgagcttcga cagaagcgca aacattcgct ggacctgttg cacgattatt tgacaacagg
     2221 agtttttcca cgcaattacg attacaaaga ccgtcgtaag ccttgcttta ttgacaaaga
     2281 caatagaatt tgtgcggttg gttacttaat tgagcacacg gccgggagac gattcgcaga
     2341 agatattaat aacaaacaca aatacgacgc tattttagca atgaatgatg acatggttga
     2401 tagctggatt tcatcaagcg gattgtctaa agaagagtgt gctatgatac aaccaacgta
     2461 cggtccgcct ccagcgagtt cctacaacta tatttcgcca gcgtatggaa tttcatcttc
     2521 ccttttaggg ggagtgaatc tttccttaaa cacattaaat gcagttcaac tgtcaaaggg
     2581 agcgaacaat aaaacaattg ccatagttgg gctaatcacg ggtgcaggac aaactatt
//
LOCUS       DASQJI010000846         2914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_294589,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000846 DASQJI010000000
VERSION     DASQJI010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294589"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..925
                     /locus_tag="VEV83_21985"
     CDS             <1..925
                     /locus_tag="VEV83_21985"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HYK47870.1"
                     /translation="KHVYHKEMFRIANELWSKYCADQQKPNDSLMLIKAVLDKISLNH
                     ASPQHVVDTAKELVHHLEHFIISKHLFNYDTTHALKVRIMPAYMAGVSLANAQFIPPY
                     QKSGTTYYNIMDLSKMPAPDAESELREYNTYSLQFLSIHEAMPGHCMQGVYNNRNAGS
                     KIKSVFGNGAMIEGWAVYCEQMMMENGWGNNAPELWLTLYKWRLRECSNVLIDYGIQC
                     LHYSEDDVKKLLKTETFQEDGQIKEKYHRATVSQVQLCSYFTGCSDILALREAYKNKM
                     GGKFSLEDFHEQFLSYGSAPVKYIREVMLKD"
     gene            1042..1566
                     /locus_tag="VEV83_21990"
     CDS             1042..1566
                     /locus_tag="VEV83_21990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYK47871.1"
                     /translation="MKKFLSIALLSGILLMTVNAHAQEDKSKRPSPPATASATTSKGV
                     TIKIDYSQPSVKGREIGKDVEPMKGKVWRTGANEATVFEVNKDVTIDGKPLKAGKYGL
                     FSIWNGDSWTVVFNKTWNQWGAFDYKEADDALRVNVKNMPPSKPAEKMTFTVDKAGKV
                     MLAWGNVGFDFTVN"
     gene            complement(1669..2433)
                     /locus_tag="VEV83_21995"
     CDS             complement(1669..2433)
                     /locus_tag="VEV83_21995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008587923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family containing protein"
                     /protein_id="HYK47872.1"
                     /translation="MRKFLVIILFIPAIGFAKTQTEYYTITAYHFKEAQQEVALDTYL
                     QTAYLPALHRKGKTAVGVFKPIANDTATDKLIYIIIPFKSLDEMQALQNALMQDATYM
                     LAGKDYINASYQSPPYSRMETIVLEAFELSPQMNLPKLSSNKQDHIYELRSYESPTES
                     YYHNKVKMFNAGGEIGIFSRLNFNAVFYGNVIAGCRMPNLMYMTSFENMTERDAHWKS
                     FTDDPATKKLFAMDEYKNNVSKADIILMHAASYSDY"
     gene            2565..>2914
                     /locus_tag="VEV83_22000"
     CDS             2565..>2914
                     /locus_tag="VEV83_22000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HYK47873.1"
                     /translation="MMTVKVAGVQMSCTADKEANVEKAMQRIREATAKGAQIVCTQEL
                     FASLYFCDEENYDNFKLAELIPAETSETLSTLAAELNIVIVASLFEKRTKGIYHNTTV
                     VIDADGTLLGKYRK"
BASE COUNT          898 a          569 c          670 g          777 t
ORIGIN      
        1 aaaacatgtt tatcacaagg aaatgttccg cattgccaat gaactgtggt cgaaatattg
       61 cgccgatcag cagaaaccaa atgattcgtt gatgctgata aaggctgtgc tggacaaaat
      121 ttcattaaat catgcttcac cgcagcacgt cgttgacacc gcaaaagaac ttgtccacca
      181 ccttgaacac ttcatcataa gtaaacatct ttttaattac gacacaaccc atgctttaaa
      241 agtacgaatc atgcctgcgt acatggctgg agtttcatta gcgaacgcac agtttatccc
      301 gccttatcaa aaatcaggaa caacatatta caacattatg gacttgtcaa aaatgcctgc
      361 gcctgatgct gaaagcgagc taagggagta caatacgtac tcactgcagt ttctttcgat
      421 ccatgaagca atgcccggcc attgtatgca aggggtatat aacaacagga acgcaggtag
      481 taaaataaaa tctgtatttg gtaacggagc tatgatagaa ggctgggcag tgtattgcga
      541 acaaatgatg atggaaaacg gctggggcaa taatgctcct gagctttggc ttacattgta
      601 caaatggcgg ttgcgcgaat gcagcaacgt tttgatcgat tatggaattc aatgtttgca
      661 ttacagtgaa gatgacgtga agaaattatt gaagaccgag actttccagg aagacggaca
      721 gataaaggaa aaatatcatc gtgcaaccgt atcgcaggta cagctctgct cctactttac
      781 agggtgctcc gatattttag cgctacgtga agcgtataag aacaaaatgg gcggcaaatt
      841 cagcctcgaa gattttcatg agcaatttct gagttatgga agtgcgccgg taaagtatat
      901 aagagaggtg atgttgaagg attagagtcc gaaagtccga aagtcagaaa gacgggaaag
      961 acggaagacg taaattttaa aatagattta aaatctgtaa caacattttt tgttcaactt
     1021 tggcgcaata aaaaactcat catgaaaaaa ttcttatcga ttgccttgtt atcaggcatt
     1081 ctattaatga ccgtaaatgc acatgcgcag gaagacaaat ccaagcgtcc aagcccgccg
     1141 gctacagcgt cggcaaccac atcaaagggt gtaaccatta agatagatta tagccagcct
     1201 tctgtgaaag gcagagagat tggaaaggac gttgagccaa tgaaaggaaa agtttggcgt
     1261 accggcgcaa acgaagcaac cgtttttgaa gtgaacaaag acgtaacaat cgacggcaag
     1321 ccgctaaagg ccggaaagta tggcttgttt agcatttgga atggcgatag ctggacggtg
     1381 gtctttaaca agacctggaa ccagtggggt gcgtttgact acaaagaagc ggacgatgct
     1441 ttgcgcgtaa atgtaaaaaa tatgcctccg tcaaaaccgg cggagaaaat gacgtttact
     1501 gtggacaagg caggtaaagt aatgcttgca tggggtaatg tgggttttga ttttaccgtg
     1561 aactaaggtc cggggtacga gccttccgtt tttgttgtct ctgaggaaaa agaggtgtgc
     1621 aatgaaactt ccaacctggc acgttgataa aacgtgccag gttgtttatt agtagtctga
     1681 ataagatgca gcatgcatca aaataatatc tgctttagaa acattattct tgtactcgtc
     1741 catggcgaac aatttttttg tagccggatc atcggtgaag cttttccagt gtgcatcccg
     1801 ttccgtcatg ttttcgaaac ttgtcatgta cattaagttt ggcatccggc aaccggcgat
     1861 aacgtttcca taaaacaccg cattgaagtt taaccttgaa aatatgccaa tctctccgcc
     1921 cgcattaaac atttttactt tgttgtgata atagctctcg gtcggacttt catagctgcg
     1981 cagctcgtaa atatgatctt gtttatttga actaagtttc ggcaaattca tttgtggtga
     2041 taattcaaac gcttcaagaa cgatcgtttc catcctgctg taaggcggag actgatagga
     2101 agcgttgata taatcttttc ctgccagcat gtatgtcgcg tcctgcataa gtgcgttttg
     2161 cagtgcctgc atttcgtcaa gggatttgaa tggaattatg atatagatca atttatcagt
     2221 cgctgtgtcg ttggctattg gcttaaacac gccaactgct gtcttgccct tgcgatgcaa
     2281 tgctggtaaa tacgccgttt gcaaatacgt atcgagcgca acttcctgtt gcgcctcttt
     2341 gaaatgatat gcagtgatcg tgtaatattc agtttgcgtt tttgcaaaac cgatcgcagg
     2401 aataaataaa atgataacca ggaattttct catgacacac ttattaaatg atggtagatc
     2461 gcaaagttac ccattagacc attaacgggg gaatgctatc aattgatttt aaaactcaga
     2521 actaaagtga agaaacaatt atttttgcgc acaaaatttt tttaatgatg acagttaagg
     2581 tagcaggcgt gcagatgagt tgtaccgcag ataaagaagc gaacgttgag aaagcaatgc
     2641 agcgcatacg cgaagcgaca gcgaaaggcg cgcaaatcgt ttgtacgcaa gaactgtttg
     2701 catcattata tttctgcgac gaagaaaact atgacaactt caagctcgct gagctgatcc
     2761 ccgccgagac gagcgaaacc ttaagcaccc tggcggctga actaaacatt gtgatcgtag
     2821 catcgctatt tgaaaaaaga acgaagggca tatatcataa caccaccgtg gtcattgatg
     2881 cggatggcac tttactgggt aagtatcgta aaat
//
LOCUS       DASQJI010000847         3703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_908722,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000847 DASQJI010000000
VERSION     DASQJI010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908722"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VEV83_22005"
     CDS             complement(<1..586)
                     /locus_tag="VEV83_22005"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYK47874.1"
                     /translation="MHDEKSIAIIGAGLVGSLLSIFLARRGYKIKIYERRADMRKKQV
                     DAGRSINLALSDRGLLALEEVGLAQEIKAISIPMHGRYIHHIDGSTAFQPYGKEGQYI
                     NSVSRATLNMKLMDISEEHGVEMFFNHRCSSIDWKKNEIKFDLTSDSSNLEPQTSNFK
                     LLLAADGAFSAARLQHQIQHDKFDYQQYYIDCGYK"
     gene            628..2913
                     /locus_tag="VEV83_22010"
     CDS             628..2913
                     /locus_tag="VEV83_22010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK47875.1"
                     /translation="MLLSFTAFMHAHTDDIKKPKHCYWQNTKCIRVFTTLLSALSVNS
                     ISAQQNYEGADSIHTLLFLNKAQIFTDQGKFDSAIQICNAVITSGTHSGYPAGEAQAY
                     LRLGDIAYQQTNIAAMGRYDSLALRSAQNIPDKDLTAASLNSLGLYFAEQGKKNEAET
                     LFRSALKMQADEESALAADVFNNLGYMHGLQGEPEQAADWHMRSLTVYEKLNDKTGQA
                     KTLDNIASLYYNLSKFEQAIYYQQRSISIRKNTNDHYGLAIAYSNISQMYLAIDSADD
                     ALNYQQLGMRNAQSSGSKKLIAQSHIALSLMYSKQGDSKKALEEELKAIVLLEEIGDK
                     EMLSRRYIAAGISYGILEDSLAAIENFNKAIALSEQLHNRENLRDVYAGINIFYRERK
                     DYHKAYDNYRKYIKYRDSIVNEETFAKINEIETRYETEKKDAQIKQLTDEQLIQQLQL
                     EKQKAIINGNLLAAKEKENEIDLLVKTRTLQNLEIKKQDLDLETQTALAKINEQKRKL
                     AEQDGQLKEKKLQREKLLRNIMIGGFLLSGIIIFGLFNRYQLKKKLEQQKAMIDERNR
                     ISSELHDEVGSTLSAINILSHGAKNNLQKNVDKSGEFILKIGESSQRMMLAMKDIVWS
                     IHPGNDTMQSVIVRMKEYAAEILEAKNIDYHFVHTDEASSQPVAEQLRRDIYLVFKEA
                     VNNLAKYANASAADIDLYSDKNIIHLIVKDNGKGFDAAGITNSNGLRNMQMRAASHKG
                     SLSITSNLHEGTSIHATFAIA"
     gene            2957..3589
                     /locus_tag="VEV83_22015"
     CDS             2957..3589
                     /locus_tag="VEV83_22015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47876.1"
                     /translation="MIKVAVFEDRPELREGLADLLTSADEIKFCGAWENCNHVQRIMQ
                     QHQPDVVLMDIEMPGVNGLEGLQIIKKTSPQINVIILTVFENTENLFSALCLGANGYL
                     LKSTPPLKIIEAVKEVYAGGAPMTASIAAKVLRSFASHTQRANSDYSLSPREKDILSS
                     LVKGNSYKMIAAELSIAIDTVRTHIRKIYDKLHVHSMNEAVAKAIHNRIV"
BASE COUNT         1180 a          749 c          808 g          966 t
ORIGIN      
        1 ctttatatcc gcagtcgatg taatactgct gataatcgaa tttatcatgc tggatttgat
       61 gctgcagacg tgctgcagaa aaagcgccgt ctgcggccaa tagcagtttg aagtttgatg
      121 tttgaggttc gaggttggac gaatcgcttg tcaggtcgaa tttgatttca ttttttttcc
      181 aatcgattga tgaacatcta tgattgaaaa acatctcgac gccgtgctct tccgatatgt
      241 ccattagttt catattcaac gttgcgcgcg aaaccgaatt tatgtattgt ccttctttac
      301 cataaggctg aaatgccgtg ctgccatcaa tgtgatgaat ataacgccca tgcattggga
      361 tcgatattgc ttttatctct tgtgcaagac cgacttcttc taacgcaagc aatccgcgat
      421 cgcttaatgc aagattgatg gaccggcccg cgtcaacttg ttttttgcgc atatcggcgc
      481 ggcgctcgta tatttttatt ttgtatccgc gcctggctaa aaaaatagac agcaacgagc
      541 caacgagacc ggcgccaatt attgctatgc ttttttcgtc gtgcatagat attaccatgc
      601 ctgcttactc aggattgtcg ttactttatg ttgttatcgt ttactgcttt catgcatgca
      661 catacagatg atataaaaaa accaaaacat tgctattggc aaaacacgaa gtgtatccgc
      721 gtttttacaa cattgctttc ggcgctatcg gtaaattcaa tttctgctca gcaaaattat
      781 gagggcgcag actcaataca tacattactt tttttaaata aggcgcagat ttttacggat
      841 cagggtaaat tcgactccgc gatacaaata tgcaatgcgg taattacatc tggcactcat
      901 tctggatatc cggccggaga agcgcaagcg tatctgagac tgggcgatat tgcctatcaa
      961 cagaccaaca tcgctgcgat gggccgctac gattcgctcg ctctgcgatc tgcacagaat
     1021 attccggata aagatcttac tgccgcttca cttaattcac tgggcttgta ttttgctgaa
     1081 caaggcaaga aaaacgaggc ggaaacatta tttcggagtg cacttaaaat gcaggctgat
     1141 gaagaatctg cgcttgctgc agatgtgttt aataatctgg gctatatgca tggcctgcaa
     1201 ggcgaaccgg aacaggctgc tgactggcac atgagatctt tgacggtgta tgaaaagtta
     1261 aacgacaaaa ccgggcaggc aaaaacctta gacaacattg cttcattgta ttacaacctc
     1321 agcaaatttg agcaggcaat ttattatcaa caaagatcta tcagtatcag aaaaaatacc
     1381 aatgaccatt atggtttagc tatcgcttat tcaaatatct cgcaaatgta tcttgcgatc
     1441 gactctgctg atgatgctct caattaccag cagctaggca tgcgaaatgc tcaatcttcc
     1501 ggttcaaaaa aattaattgc gcaatcgcac atagcattga gcttgatgta tagcaaacaa
     1561 ggcgatagca aaaaggcact ggaagaagag ctaaaagcca tagttctgct ggaggagatt
     1621 ggcgataagg aaatgctttc ccggcggtat attgccgctg gcattagtta cggtattctg
     1681 gaggattcgc tggctgcgat cgagaatttt aataaagcga tcgctttatc agagcagctg
     1741 cataatcgtg aaaacctgag ggatgtgtac gcgggtataa acatttttta cagggaaaga
     1801 aaagattatc ataaagctta cgataactat aggaaatata taaaataccg ggacagcatt
     1861 gtaaatgagg aaacctttgc caaaatcaac gaaatagaaa cccgttatga aacggaaaaa
     1921 aaagatgcac agatcaaaca gcttacagac gaacaattaa ttcagcaact acaactggaa
     1981 aagcaaaagg caatcatcaa tggaaacctg ctggcagcga aggaaaagga aaatgaaata
     2041 gacctgctgg tgaagacccg tacgttacag aatctcgaaa taaaaaaaca ggacctcgac
     2101 cttgaaacac aaacggcact cgcaaagatc aatgagcaaa aaagaaaact tgcggagcag
     2161 gacgggcaac tgaaggaaaa aaaattgcaa agagaaaagc tgctgcgcaa tataatgata
     2221 ggcggcttcc tcttaagcgg gatcatcatt tttggtttgt ttaaccgtta ccagttgaag
     2281 aaaaaactcg agcagcaaaa agctatgata gatgaacgca accgcatatc ttctgagctg
     2341 catgatgaag ttggaagcac gctgagcgcg ataaacatcc tttcacatgg cgcaaaaaac
     2401 aatttgcaga aaaacgttga caaatcaggc gagtttattc tgaagatcgg tgaaagttcg
     2461 cagcgcatga tgcttgcgat gaaggatatt gtatggagta tacatcccgg gaacgacacc
     2521 atgcaaagtg taattgtccg catgaaagaa tatgcggcag aaatactgga agcaaaaaat
     2581 atcgactatc attttgtgca caccgacgag gcttcgtctc aacctgtggc tgaacaactg
     2641 cgccgcgata tttatcttgt ttttaaggaa gcggtaaaca acctcgcaaa gtatgcgaac
     2701 gcctccgccg cagatataga cctttattca gataaaaata taattcatct gatagtaaaa
     2761 gataatggaa agggcttcga tgctgcggga attacaaata gtaatgggtt acgaaatatg
     2821 caaatgagag ctgcttcgca caaaggatca ctgtccataa cgagcaatct gcatgaagga
     2881 acaagcattc atgctacgtt tgccatcgca tgatgatgtg agcagaaata aaaatcgatc
     2941 gttgaatttt gtatctatga tcaaagtagc ggtatttgaa gacaggcctg agttgaggga
     3001 agggcttgcc gacctgctta cgtctgcaga tgagataaaa ttctgcggtg cctgggaaaa
     3061 ttgtaaccat gtacaacgca ttatgcagca acatcagcct gatgttgtat taatggatat
     3121 tgaaatgccg ggcgtaaacg gtttagaggg tctacagatc ataaaaaaaa cgtcgcccca
     3181 aataaatgtc atcatactta ctgtttttga aaacaccgaa aatcttttta gcgcactttg
     3241 ccttggggcg aacgggtatc tactaaagag cacaccgcct ttaaaaataa tcgaggctgt
     3301 taaggaagtg tatgcaggcg gcgcaccgat gaccgcatcg atcgcagcca aagttttacg
     3361 atcatttgcg tcacatactc aaagggcaaa ttctgattat agtctttcgc caagagaaaa
     3421 agatattctt agctcgctcg taaaaggcaa tagttataaa atgatagctg ccgaattaag
     3481 tatcgctatt gatactgtac gtacccatat tcgcaagatc tacgataagc tgcatgttca
     3541 ctccatgaac gaagcagtag caaaggctat tcacaaccgc attgtatagc gcacacatcg
     3601 catcatcatg cgattgccca aacctttttc ttagcgcagc tttacatgat aattaaatcc
     3661 aaaaagaatt atcatgaaaa aatttacttt tttggttgcg ctg
//
LOCUS       DASQJI010000848         4118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2750687,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000848 DASQJI010000000
VERSION     DASQJI010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4118
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2750687"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /locus_tag="VEV83_22020"
     CDS             complement(<1..860)
                     /locus_tag="VEV83_22020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYK47877.1"
                     /translation="MKPLLFLCLSIFAARGLTFAQNEGAVPGKASMYTSPPNVTSDAK
                     ANEHPDLKFTKTPTATEGISLLNGSFELNSGQCIINGSNDVITSNVVATTAFGCAGEI
                     DLMNNLCGWGLAKSGTYFLCLANGNRHCGDACNLELTANLIAGNTYTVSYFDRGYDVE
                     KCCKPSVALEVGISTDAAKQGTIVYTSPKPTLNVWSQRTFTFTAPNNGKYVSFHAKDS
                     AGRWTHIDSVTISANACSAPFNLRVRNVTSTSAELTWDVPADPVSFLKIIGGEKGSAT
                     VIRKQLESTDT"
     gene            1107..1964
                     /locus_tag="VEV83_22025"
     CDS             1107..1964
                     /locus_tag="VEV83_22025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside 6-adenylyltransferase"
                     /protein_id="HYK47878.1"
                     /translation="MRSQDEVMELILRVASADDRIRAVFLGGSRANSNAPQDILQDFD
                     VTYVVSQIDSFLRDHSWIDVFGERLIVQMPEEMTIGEKDKYSFHYLMLFKDGVRIDLT
                     LLPLSAFETGYKHDSLTILLLDKDAFFEKLPPETRADYYIKRPTEKEFNDCCNEFWWV
                     STYVAKGLWRHELIYAKTMLDNVVRSMFLKMIEWYIGTQTDFKVSFGKSGRNVKQHVS
                     PELYAKILSTYQDSDINNTWRSLFTMTSIFSELANEVAADQQFKYNVAEQENVTAYLK
                     SIYKMQAEK"
     gene            complement(2031..2930)
                     /locus_tag="VEV83_22030"
     CDS             complement(2031..2930)
                     /locus_tag="VEV83_22030"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HYK47879.1"
                     /translation="METIAFPVKTRELHNHHFDSTIWNDFKFRNDDIVIATYAKSGTT
                     WLQQIVSQLIFNGQEDMEVAEMSPWLDLRVPPKEVKLPAVEQQQHRRFLKTHLPVDAL
                     VFSPKAKYIYIGRDGRDVVWSMYNHHANANNFWYEALNDTPGLVGPRIEKPVGDIVQY
                     FRDWLDKDGFPFWPFWENVRSWWEIRSLANVHLIHFEKLKQDMPAEIKKVAEFLDIEI
                     DAAKWNAILEHCSFEYMKKHSVKSVPLGGAFWDGGSEVFINKGVNGRWKDVLPKEDSE
                     RYERMCIEELGEECARWLNTGEM"
     gene            3048..3566
                     /locus_tag="VEV83_22035"
     CDS             3048..3566
                     /locus_tag="VEV83_22035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HYK47880.1"
                     /translation="MRKIILTVAVSLDGFIEGPNGEYDWCMTDQDYGLSDFFKRVDAR
                     FLGRKSYELSLAVADEIPAGFPEFQDYVFSTTLNSVKNGAILIKENIKNEVQKIKAQD
                     GKDIWLFGGASLTTSLMNLGLIDEMWLAVHPIVLGAGKLLFQDIQGRVGLTLTDVKTY
                     STGLVSLMYTLQ"
     gene            complement(3572..>4118)
                     /locus_tag="VEV83_22040"
     CDS             complement(3572..>4118)
                     /locus_tag="VEV83_22040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYK47881.1"
                     /translation="FRNPHRITWTSSREMITCNIGHANIESIDVIKKGNDYGWPIREG
                     SFVLNPYGDLKKVYALSPGDSTYKITYPVAEYDHDEGKAICGGYEYSAAIPQLKGKFL
                     FGDIPTGRLFYINTKDIKHGSEAPIHEWQISINGSLKKLSDLCGDERVDLHFGKDSAG
                     EIYILTKADGKIYRIVGAALK"
BASE COUNT         1145 a          929 c          872 g         1172 t
ORIGIN      
        1 gtgtcggtgc tttccagttg tttacggatc accgtggcac tgcctttttc cccgccgatt
       61 atcttaagaa acgagacagg atccgccgga acatcccacg ttaattccgc actggtcgat
      121 gttacgttgc gaactcttaa gttgaacgga gcactgcatg cattggcaga aatagttacc
      181 gaatcaatgt gcgtccaccg gccggcactg tcctttgcat gaaagcttac atatttgcca
      241 ttgtttggcg cagtgaaagt gaacgtacgc tgcgaccaaa catttaatgt cggtttcggg
      301 cttgtatata caatagtgcc ctgtttagcc gcgtcagtag aaatacctac ttctaatgca
      361 actgatggct tacagcattt ctctacgtca tatcccctgt cgaagtaact taccgtgtat
      421 gtgtttccag caataaggtt cgcggttaac tccaaattgc aagcgtcacc gcaatgccgg
      481 ttcccgttag caaggcaaag gaaatacgtg cctgatttgg caaggcccca tccgcaaaga
      541 ttattcatca gatcaatttc accggcgcaa ccaaatgcag tggtcgcaac tacattggaa
      601 gtaattacat cgttgctacc gttgatgata cattgaccac tattcaattc aaaggatccg
      661 ttgagcaggc tgataccctc tgtggccgtt ggcgtcttag taaatttcaa atcaggatgc
      721 tcattcgctt ttgcatcaga agtaacattt ggtgggctag tgtacatgct cgcctttcct
      781 ggaacggcgc cctcattttg cgcaaacgtc aatccccttg cggcgaaaat cgaaaggcaa
      841 agaaacaaca gaggcttcat acacttttag gttttgagat taagaactat caaattgaat
      901 tgttcacatg acagcagtta aagcaatatc acaaattcga tcggtcatta aatttagaac
      961 aaaaaaatta caaccatccg aatcattttc gcagttgtga atgggaacac gtttatcctg
     1021 atttaccttt ggcataatag catcctcttt catgtaaacg tggatacaat tagaaatgca
     1081 aatattccta accacagtgc agcctgatga gaagtcaaga tgaagtaatg gagttaattc
     1141 tccgtgtcgc cagcgcggat gaccgaataa gggctgtatt cctcggcggc tcaagggcga
     1201 acagcaatgc gccgcaagat attctgcagg atttcgacgt tacttatgtt gtgtcacaaa
     1261 tcgattcttt tttgagagat catagttgga tagacgtttt tggtgaacgg ctcatcgtgc
     1321 aaatgcccga agaaatgacg attggcgaaa aggacaagta cagctttcat tatttaatgc
     1381 tctttaaaga tggagtcaga atcgatttga ccttgttacc tctgagcgcg tttgaaaccg
     1441 gctataaaca tgacagccta acaattttgt tgttggataa agacgccttt tttgaaaaat
     1501 tgccaccgga aacgcgtgcg gattactata tcaagcgccc gacggaaaaa gaattcaacg
     1561 attgttgtaa tgaattctgg tgggtaagta cgtacgtggc gaaaggtttg tggagacacg
     1621 aattgattta tgctaaaacg atgctcgata atgttgttcg atccatgttt ttaaaaatga
     1681 tcgaatggta tatcggcact caaactgact ttaaagtttc gtttggaaaa agcggacgaa
     1741 acgtaaagca acatgtttca ccggaactat atgctaagat cttatctacc taccaggata
     1801 gtgatattaa caatacctgg cgttcattat tcacgatgac gagcattttt agcgagcttg
     1861 caaatgaggt cgccgcggat cagcagttta agtataacgt ggctgaacaa gaaaatgtga
     1921 ccgcctattt aaaatcgatt tataaaatgc aggcggagaa atagcactgc acgcataaaa
     1981 gcaatgcgtt gaccagcttc gatcaatttt ttccttagcc cgttatggct ctacatctct
     2041 ccggtattca accagcgtgc acattcttcg ccaagttctt caatgcacat tctttcgtag
     2101 cgctcgctat cctctttcgg aagaacgtct ttccatcggc cattcacgcc tttattgata
     2161 aatacttccg agcccccatc ccagaacgca ccgccaagtg gaaccgattt cacggaatgt
     2221 tttttcatgt actcgaagct gcaatgctca agtatggcat tccattttgc cgcatcgatt
     2281 tcgatatcga gaaattcggc aacttttttt atttcagccg gcatgtcctg tttcaacttt
     2341 tcaaaatgga tcaaatgaac gttcgccaaa ctgcgaattt cccaccatga tcttacattc
     2401 tcccaaaaag gccaaaaagg aaatccatct ttatccagcc aatcgcggaa atattgcaca
     2461 atatcaccaa caggtttttc aatacgcggc cccacgaggc caggagtgtc gtttaaagcc
     2521 tcgtaccaaa aattatttgc attcgcatgg tgattgtaca tgctccacac cacatctctc
     2581 ccatcgcgcc caatgtagat gtactttgct tttggagaaa aaacgagcgc gtcaaccggc
     2641 aagtgtgttt ttagaaaacg cctgtgttgc tgttgttcca ccgcaggtag ttttacttcc
     2701 ttaggcggca ctctcaggtc gagccacggc gacatttcag cgacctccat atcttcctgc
     2761 ccgttaaaga tcaactgcga cacaatttgc tgcaaccagg tggttccaga ttttgcatac
     2821 gtcgcgataa caatgtcgtc gttgcgaaac ttgaaatcat tccagatcgt tgaatcgaaa
     2881 tggtggttat gcaattcacg tgtcttcaca gggaatgcaa tcgtttccat attatacatg
     2941 ttttaggtgt gcatggaaga taacaaaaaa tgtcaaacgc ttttgccggc tctcaatttt
     3001 tgtattttag cgatagctgc ccgaatcttt cacataaaac tcgttccatg cgaaaaataa
     3061 tattaaccgt tgctgttagc cttgatggct tcatcgaagg acctaacgga gaatacgatt
     3121 ggtgtatgac ggaccaggac tatggacttt cagatttctt taaacgcgtc gatgcacgat
     3181 ttttaggaag aaaaagttac gaattaagcc tcgcagtagc tgatgaaata cctgcaggct
     3241 ttccggaatt ccaggattat gttttttcaa cgactctcaa ttcggtgaag aacggtgcga
     3301 tcctgataaa agaaaatatc aaaaatgaag tgcagaaaat aaaagcgcag gacggaaaag
     3361 atatttggct gtttggaggc gctagcctga caacgtcgct gatgaacctg ggcctgatag
     3421 atgaaatgtg gctggctgtt catcccatcg tgctcggcgc aggcaagctt ttgttccagg
     3481 acattcaagg cagggtcggt cttaccctca ctgacgtaaa aacctattcg acaggattgg
     3541 tatcccttat gtatacgctt cagtgaaata actatttcaa tgcagcgcca acaatccggt
     3601 atatttttcc atcggccttt gtcagtatgt aaatttcgcc cgcgctgtct ttaccaaagt
     3661 gaagatctac tcgttcatca ccgcagagat cagaaagctt tttcagcgaa ccgtttattg
     3721 aaatttgcca ttcatgaatg ggagcttcgc ttccatgttt gatgtctttt gtgtttatat
     3781 aaaacaacct cccagtcgga atatcgccga acaaaaactt cccctttagt tgagggatcg
     3841 cagctgaata ttcatatccc ccgcagatcg ccttgccttc atcatgatca tattcggcaa
     3901 cagggtacgt gatcttatat gtgctgtcac caggcgaaag tgcatacact tttttcagat
     3961 caccgtaagg attcaggaca aaacttcctt ccctgatagg ccatccgtaa tcgttccctt
     4021 ttttgatgac atcgatggat tcaatatttg catgaccaat gttacatgtt atcatctcgc
     4081 gtgagctggt ccatgtaatg cgatgcggat ttctgaaa
//
LOCUS       DASQJI010000849         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1673762,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000849 DASQJI010000000
VERSION     DASQJI010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673762"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1474
                     /locus_tag="VEV83_22045"
     CDS             <1..1474
                     /locus_tag="VEV83_22045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HYK47882.1"
                     /translation="AQKEITLSKDALKDKIMGGWAGQTIGVTFGGPYEFRFQGTFIQD
                     YQPLMWNDSLLKINMINNPGLYDDLYMDLTFVNVFEEYGLDAPVDSFANAFAHAGYML
                     WHANQAARYNILNGIKAPASGYWMNNPHADDIDYQIESDFAGLMSPAMPNTASAISDK
                     IGHIMNYGDGWYGGVFIGAMYTQAFLSNDIHFIIDEALKTIPAQSSFYKCIADVIRWH
                     KKYPDDWHQTWFELQRNWSDDIACGEGVFSSFDIDSKLNSAYVVLGLLYGEGDYSKSL
                     EITARAGQDADCNPSTVGGILGTMMGYKKIPAYWKQGLKDIEDINFKYTTMSLNKVYE
                     IGFKQALENIQRNGGKVEGDNVHIVVQSPEAVKLEQGFPNIYPVENISFYHNDIKEAG
                     FEFKGTGFILRGEAKKIKDDFRENDFNAELYIDGAKVETAKLPTDFTTRRYELFWKYG
                     LRNTNHTVRIKVLNPTNEAQVNTWEYIVYSDKKVTGTNHN"
     gene            1479..>2106
                     /locus_tag="VEV83_22050"
     CDS             1479..>2106
                     /locus_tag="VEV83_22050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47883.1"
                     /translation="MQQKRLTRFVRIFPAIMFVLAVACAGKSPANNGSYDSASAALSP
                     VKDSFPGGKITTVVCLNDASQSYDIYVPVNGMNAHSSLVFFFDPHADGSLPVKKYQSL
                     ADKYDFIFIGSNNSKNGNDFQMSENIWRNLFNDAQSRFTFNHDRMYTCGFSGGAKVAG
                     YVALNHAEIKGVIANGAGLPDGTPAGNFNFSFTAVTGEGDMNMTELVSV"
BASE COUNT          615 a          412 c          516 g          563 t
ORIGIN      
        1 agcgcagaaa gaaatcacct taagtaaaga cgcattgaaa gataagataa tgggcggatg
       61 ggcgggccaa acgatcggtg ttacgtttgg tggcccatat gaatttcgtt tccagggaac
      121 ttttatccag gattaccagc ccctgatgtg gaacgatagc ctcttaaaaa ttaacatgat
      181 caacaacccg ggtctttatg atgatctgta tatggatctc acttttgtga atgtgttcga
      241 agagtatgga ctcgatgctc ctgttgattc tttcgcaaat gcgtttgcac atgcagggta
      301 tatgttgtgg catgcgaacc aggcagctcg ttacaatatc ctgaacggca tcaaagcgcc
      361 tgccagcggc tactggatga ataatccgca cgccgatgat atcgattacc agattgaaag
      421 cgatttcgcc gggttaatga gccccgctat gccaaacacc gcttctgcga tcagcgataa
      481 aattgggcac ataatgaact acggagacgg atggtacggt ggtgtattta ttggcgcgat
      541 gtatacgcag gcttttcttt caaacgatat tcattttatc atcgacgaag cattgaaaac
      601 aattccggca caaagcagtt tctataaatg tattgctgat gtgatcaggt ggcataaaaa
      661 atacccggat gactggcatc aaacatggtt tgagttacaa aggaactgga gtgatgacat
      721 cgcttgcggc gaaggtgtat tcagcagttt cgacattgat tcaaaattaa attccgcata
      781 cgttgtgctt ggcttgctgt atggcgaagg agactacagc aaatcacttg agatcacggc
      841 cagagcgggg caggatgcag attgcaaccc ttcaaccgta ggcggcattt taggaacgat
      901 gatgggctat aaaaaaattc ccgcttactg gaaacaggga ttgaaagata ttgaagacat
      961 aaattttaaa tacacgacca tgtcgttgaa taaagtttac gagatcggtt ttaagcaggc
     1021 gttggaaaat atccagcgca atggcggaaa agttgagggg gataatgtgc acatagtagt
     1081 gcaatcgccg gaagctgtaa aattggagca gggctttccg aatatttatc ccgttgagaa
     1141 tatcagcttc tatcataatg acatcaaaga agccggcttt gaattcaaag gcaccggttt
     1201 tattttaagg ggcgaggcga aaaaaattaa ggacgatttt cgggagaatg attttaatgc
     1261 ggagctatac attgacggcg ccaaagtcga aactgcaaag ttgccgactg attttaccac
     1321 gcgccgatat gagttgtttt ggaaatatgg attgcgcaac acgaaccaca cggtaaggat
     1381 caaggtgctt aacccaacca atgaagcaca ggtcaacacg tgggagtata ttgtttatag
     1441 tgacaaaaag gtgaccggta caaaccacaa ttaattgtat gcaacaaaaa cgtctcacga
     1501 gatttgttcg catttttccc gccatcatgt ttgtgttagc ggttgcttgc gcaggcaaat
     1561 cgcctgcaaa caatggttca tatgactcag ccagcgcggc gttgtcacct gtaaaagatt
     1621 cgtttccggg aggaaaaata acaacggtag tttgcctaaa tgatgcttcg caatcttacg
     1681 atatttatgt tcctgttaat ggaatgaatg cacattcttc tcttgtattt tttttcgatc
     1741 cgcatgctga cggttcactg ccggtaaaaa aatatcaatc actcgcagat aagtatgatt
     1801 tcattttcat cggcagcaat aattcgaaga atgggaatga cttccaaatg agcgaaaata
     1861 tctggcgtaa tctgtttaac gatgcacaga gccgttttac atttaaccat gaccgaatgt
     1921 atacgtgcgg tttttctggt ggtgctaagg ttgccgggta tgtggcgctg aatcacgcgg
     1981 agataaaggg agttatagcg aatggcgccg gcttgcctga tggaacccca gccggaaatt
     2041 ttaattttag cttcactgct gttaccggcg aaggcgatat gaatatgacg gagcttgtct
     2101 cagtca
//
LOCUS       DASQJI010000850         2786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2444524,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000850 DASQJI010000000
VERSION     DASQJI010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2444524"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VEV83_22055"
     CDS             <1..539
                     /locus_tag="VEV83_22055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /protein_id="HYK47884.1"
                     /translation="MPVIEALEGQLITNKIFTAPVFENDQLLSDPANDILKIVVVNRY
                     SNARVAKAFIKNFGLKKGAIASSVAHDSHNVVAVGVDDDNITRAANLVIKETGGVSCV
                     DGETEKTLPLPVAGLMSADDGYRVAESYTDIDKMAKALGSKLLAPFMTLSFMALLVIP
                     HLKLSDKGLFDGDEFKLI"
     gene            complement(726..1679)
                     /locus_tag="VEV83_22060"
     CDS             complement(726..1679)
                     /locus_tag="VEV83_22060"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HYK47885.1"
                     /translation="MKVTEHIRNAQGTLISFEILPPLKGRSISSIYDHLDPLMEFNPS
                     WINVTYHRSETAFKKRVDGSFEKVEVRKRPGTVGICAAIMNHYKVDAIPHIICGGFSK
                     RETEDALIDLNFLGIDNVLVIRGDAEKNAAFFEAEPDGHKYASELLQQVVNLNNGIYI
                     DEDIRDGGKTSFCIGVAGYPEKHFEAPNLQIDMQRLKEKVCCGADYIMTQMFFDNQKY
                     FDFVKLCRDHEITVPIIPGLKPITSRKQLAVLPRTFHVDIPTDLSEAIMRCKTDEDCE
                     KIGTEWLTQQSKELKAFGVPVLHYYTLGKPRAIKNVVKELV"
     gene            1814..2614
                     /gene="lptB"
                     /locus_tag="VEV83_22065"
     CDS             1814..2614
                     /gene="lptB"
                     /locus_tag="VEV83_22065"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HYK47886.1"
                     /translation="MSITIRTQNLFKSYGQRMVVNDVSIEVHQGEIVGLLGPNGAGKT
                     TTFYMVVGLIKADEGEVFLDEGNITKLPMYKRAQMGIGYLPQEASVFRKLSVEDNLLA
                     VLEMTDLTRAERMKKLETLLDEFNVRHVRKNNGDSLSGGERRRTEIARALAVDPKFIL
                     LDEPFAGVDPIAVEDIQGVVARLKYKNIGILITDHNVNETLSICDRAYLLIEGKIFKQ
                     GTAEELAADEQVRRLYLGTNFELRRKDWILDLGRKSHMEAEAEAGHQP"
BASE COUNT          773 a          633 c          621 g          759 t
ORIGIN      
        1 agatgccggt gattgaagca ttggaggggc agctcatcac aaataaaata tttaccgcgc
       61 ccgtcttcga gaacgatcag cttctttccg atcctgcaaa cgatatttta aagatcgtgg
      121 ttgttaaccg gtattcaaat gcgcgtgttg caaaagcatt cattaagaat tttgggttga
      181 aaaaaggcgc catcgcttcg tcggtggcgc acgatagtca taacgtggtc gcggtgggtg
      241 tggatgacga taatatcacg agagctgcga accttgttat taaagaaacc ggcggtgtga
      301 gttgtgttga tggcgaaacc gaaaaaactc ttccattgcc ggttgccggt ttaatgagtg
      361 ctgatgatgg ctacagggtc gctgagtctt acaccgacat tgacaagatg gccaaggccc
      421 ttggctcgaa attattagca ccctttatga cgctcagttt tatggcgctg ttggtgatcc
      481 cgcatttgaa gcttagcgac aaaggcttgt ttgatggaga tgagtttaag ttgatttagg
      541 atttggaatt tacgatttac aatgtacgat ttacgatttg cttccagaca gaagacgttg
      601 cgcaatagct ataacctcga aatttgtttt caggttttga aaacttgcgc atcctcacaa
      661 acagcgaatt tgaacagcca ttcaccatcg accattcaca attcacaaca aggcttcgcc
      721 atgaatcaaa ccagctcctt caccacattc tttatcgctc tcggcttgcc tagtgtatag
      781 taatgcagca ccggaacacc gaacgctttt aattctttgc tttgttgcgt gagccattcg
      841 gttcctattt tctcacagtc ctcgtccgtt ttacagcgca tgatcgcctc agaaagatcc
      901 gttggtatat caacatgaaa ggttcttggc aacaccgcca gttgcttgcg cgacgtgatc
      961 ggcttcagtc cggggatgat gggaacggtt atctcatgat cgcggcacaa tttcacaaaa
     1021 tcaaaatatt tctggttgtc gaaaaacatt tgcgtcataa tataatctgc tccgcaacaa
     1081 actttttctt tcagcctttg catatctatt tgcagattcg gcgcctcaaa atgtttttcc
     1141 gggtagccgg caacaccgat acaaaatgac gtttttcctc catcgcgaat atcttcatca
     1201 atataaatac cgttgttaag attaaccact tgttgcaata attcgctggc atatttatgt
     1261 ccgtccggct ctgcttcaaa gaaggctgcg ttcttctccg catcgccgcg aatcaccagc
     1321 acattatcta tcccgagaaa attgaggtcg atcaatgcgt cttcggtttc ccttttcgaa
     1381 aaaccgccac aaatgatgtg aggtatcgca tccactttat aatggttcat gatggccgca
     1441 caaataccta ccgtacccgg acgtttgcgc acttctactt tttcaaagct gccgtcgact
     1501 ctctttttga atgcggtctc gctgcgatga taggtcacgt ttatccacga cggattaaat
     1561 tccatcaacg ggtcaaggtg gtcatagatt gaactaatgc ttctgccttt taagggcggc
     1621 aagatttcaa acgagataag tgtgccctgc gcattccgga tatgttcggt tactttcatc
     1681 caaaaaaatt ggtgcaatat acagcagcac ggcaatataa agacaaagcc gcatcgcctg
     1741 ccaaattgtt aagatgctgc ttagattgcc gcatttatac tgcttcgttt atttttgttc
     1801 aaatcattgc gcattgagta ttactattcg cacacaaaat ctttttaaaa gttacggcca
     1861 acgcatggtg gtaaatgatg tttccattga ggttcaccag ggagaaattg tcggcttgct
     1921 tggaccaaac ggtgcgggga agacgacaac gttttatatg gtggttggct tgatcaaagc
     1981 cgacgaaggc gaagttttcc tcgatgaagg caacatcacg aaactgccga tgtataaacg
     2041 cgcgcaaatg ggcatcggct acctgccaca ggaggcatcg gtgttcagaa agttgagcgt
     2101 agaagataac ctgcttgccg tgctcgaaat gactgatctt accagggcgg aacgcatgaa
     2161 aaaactggaa acactgctcg atgaattcaa cgtgaggcac gttagaaaaa ataacggcga
     2221 cagcttaagc gggggcgaac gccgcagaac cgaaatagcg cgggctttag cagttgaccc
     2281 aaaatttatt ttattggacg aaccgtttgc gggtgttgac ccgatcgctg tagaggacat
     2341 acagggcgta gttgcacggc taaaatataa gaatatcggc atcctcatca ccgatcacaa
     2401 cgtaaatgaa acactttcta tttgcgaccg cgcatatctt ttgatcgaag gaaagatctt
     2461 taaacaaggc accgctgaag aacttgctgc tgatgaacag gtgcggcgtc tgtatcttgg
     2521 caccaacttc gaattacgcc gcaaggattg gatacttgac cttggcagaa agtctcacat
     2581 ggaggcagag gcagaagctg gccatcaacc gtagctcttg aaaaacattc gactgtaaaa
     2641 cttcgaacca actaaagcga atacaactgc aacacaataa tgagtaaatt tttatattta
     2701 cctgccggca ttactcgaca accaaaaaca tcagcaaaaa aatttaaatg cactactctc
     2761 ttttcttccg aacagatgca tccatt
//
LOCUS       DASQJI010000851         5337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1213906,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000851 DASQJI010000000
VERSION     DASQJI010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213906"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VEV83_22070"
     CDS             <1..216
                     /locus_tag="VEV83_22070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47887.1"
                     /translation="TFLLQAGNDPIDTIQNSLVYYIALKKAGVPVEYHIYAEGGHAFG
                     LKKTDLPIADWPKLVETWLHTIKMISN"
     gene            496..1587
                     /locus_tag="VEV83_22075"
     CDS             496..1587
                     /locus_tag="VEV83_22075"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK47888.1"
                     /translation="MLSPGIKRYIYRIIPFGLIWLIFGSVCSLLVWGLLGLEPYSSKG
                     NPFDFGGGIFVAAVISLLSGLLIGAMEVLYLSKLFSQKSFTVKVIYKPIIYQVLINLF
                     LLISAAITIAVDLETNVFSKQVWVNVWAYFLSYAFLGTTVYMVLVIIVSLFYAEVSEY
                     LGPGVLANFFKGKYHTPIEEERIYMFLDMKSSSTLAEILGHVRYFEMLREYYADVSNP
                     IIKYSGEIYQYVGDEVIVSWTLKKGLQNNSCIQCFFAMKDPLEKEARKYKHRFGVLPG
                     FKGGFHVGKVTTGEIGVIKKDIMFTGDVLNTTARIQGLCNTYNVDILLSDDLRKMLSA
                     DKQWQMKSMGENELRGRDERIELFTILPS"
     gene            1852..2289
                     /locus_tag="VEV83_22080"
     CDS             1852..2289
                     /locus_tag="VEV83_22080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47889.1"
                     /translation="MEENLLSTPPNFKVYNDRAIYVGTFLGGPLVAGYLAAENFKQLG
                     QQDKVKITWTIAIGVTIAIFAAVFLVPAIQKVPNYIIPLIYALIAQFLVKRFQGTEIK
                     THIENGGQAYSVWRAVWIGLIGAVVLVAVIFMIILFLDKNYLQ"
     gene            2600..3265
                     /locus_tag="VEV83_22085"
     CDS             2600..3265
                     /locus_tag="VEV83_22085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47890.1"
                     /translation="MTLLINSCRKDQPTCHGNCAAISITGNTYIKTNNAALPNVPVEV
                     NWFRKGYCIVCTSYKVASGETDDNGRFDLNVTIDTTFFHDYFLSVRVPIDTNYITVSG
                     GGGVNYNEVRFDAFHSNELQNLKFEFYPKTYLTITLHRTLSDSFNYFSVNHNFTNEFD
                     YADYIITGPQYANDTTFRVTTSADIYTRIVWRKTVVAGQSNEQIDSLICTRNGTNVFD
                     INY"
     gene            3454..4242
                     /locus_tag="VEV83_22090"
     CDS             3454..4242
                     /locus_tag="VEV83_22090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47891.1"
                     /translation="MKSQKRRLTSTDIEKFVHEGFVRIDDAFPVEIANECRAILWKAT
                     GCDPHNPASWTQPVIRIGELALEPFVKAANTAILHNAYDQLVGKDNWHPKTTLGSFAI
                     RFPSMKPSPDTGWHVDASFPGEDINNYLEWRINFYSRGRGLLMLFLFSDVSDKDAPTI
                     IRQGSHLDVAKILKPEGESGLSFMKLAKRLDDLPKRQEVLATGEAGTVYLCHPFMVHA
                     AQHHRGVTPKFMAQPPLFTKHDFNIKKPEKELCPVERAIWMGLQ"
     gene            4398..5006
                     /locus_tag="VEV83_22095"
     CDS             4398..5006
                     /locus_tag="VEV83_22095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HYK47892.1"
                     /translation="MRKIIVLSMISLDGVMQAPGGPKEDRSGGFKYGGWTAPYSDEVY
                     GKVVQEELRPADYLLGRKTFEIWADYWPAHGDFWPGINEGTKYVFSKRMKKRDPLITG
                     WKNSVVLKRVADIKRIKNSNGVDIQVWGSSELVQLLLKNDLVDELKLKIHPVTLGKGK
                     KLFGNGAIPAAFKLTESIVTTTGVIIAHYKRAGKVKTGTVGA"
     gene            5069..>5337
                     /locus_tag="VEV83_22100"
     CDS             5069..>5337
                     /locus_tag="VEV83_22100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HYK47893.1"
                     /translation="MRKVIAAINMTLDGFCDHTAMIADDEIHQHYTELLSSTDTLLYG
                     RITYQLMESYWPTVVANPTGNTPIDEFAEIIDNISKVVFSHTLKNV"
BASE COUNT         1639 a         1044 c         1150 g         1504 t
ORIGIN      
        1 accttcttgt tgcaagcggg taatgatccg atagacacta tccaaaattc attggtatac
       61 tatatagctt tgaagaaagc aggtgttccg gtcgaatatc atatttatgc agaaggtgga
      121 catgcgtttg gtttaaagaa aaccgatctt ccgattgcag attggcctaa attggttgaa
      181 acatggctgc atacaattaa aatgatttct aattaatctg aactccgaac cgctaacatg
      241 ggtatttgct acagtacgac ggacgacgat caatcgctac ccatcttgag ctctggctga
      301 tagcctgccc tcaatttgat tgcgcgttaa ataattaagc tgcaaatatt atcttcaaca
      361 aaatattttc aatacaccat ttgttcgggc tggacgttca atgaatatcc ttccgccggc
      421 aataagaaaa ccaaacacaa ttgatcttaa ttaatccatt cgagcatccg gagcaattcc
      481 tcctaaacct ttaatatgtt atcgcctgga atcaaaagat atatctaccg gattattcct
      541 tttggcctga tctggttaat atttggtagt gtttgttcgc tactcgtttg ggggcttctt
      601 ggccttgagc cctattcgtc caaaggaaat ccgttcgatt ttggcggagg catttttgtc
      661 gccgctgtta tttcgctgct atcgggatta ttgatcggag ctatggaagt actttatctc
      721 tcaaagctat tcagtcaaaa gagctttaca gtgaaggtta tatacaagcc gatcatttac
      781 caggtgctca ttaatttgtt tcttttgatc agtgccgcta ttaccattgc cgttgatctt
      841 gaaacgaatg tttttagtaa acaggtatgg gttaacgttt gggcatattt cttaagttat
      901 gcatttttgg gcactaccgt gtacatggtt ttggtaatca ttgtttcgct tttttacgca
      961 gaagtaagcg agtaccttgg cccaggcgtg ttggctaatt tttttaaggg caaataccat
     1021 acgcctatcg aagaggaacg gatctacatg tttttagaca tgaaatcgtc ctccacgttg
     1081 gctgaaattt tagggcacgt caggtacttt gaaatgctca gggagtatta cgccgatgtt
     1141 tcaaacccca ttattaaata ttccggtgaa atttatcaat acgtgggtga tgaagtcatc
     1201 gtgtcgtgga cactcaaaaa ggggctacaa aacaacagtt gcattcaatg tttttttgcc
     1261 atgaaagacc cccttgaaaa ggaagcgcgc aaatacaagc accgctttgg tgtattgccg
     1321 ggatttaaag gcggctttca tgtgggaaag gtgaccaccg gcgaaattgg tgtcatcaaa
     1381 aaagatatca tgtttacagg cgatgtactc aacacaacgg cccgaataca agggctttgc
     1441 aatacgtaca atgttgacat acttttatcg gatgacctga gaaaaatgct gtccgctgac
     1501 aaacaatggc aaatgaaatc aatgggtgaa aatgagttga gaggaagaga cgaaagaata
     1561 gaattgttca ctattctacc gtcataaatt tgacaatgct gtttgataat catcggtgat
     1621 tttgccatag cgttagcgtc gcagaaacac gagccgctac tatggtattt ttgcaacagc
     1681 agggcaccac aaaccgcaat tcagcagtgt aattatactc aacttcggtt atcatcgcgc
     1741 tattatagtt atctttggca gaaattttat gaggactgca ttcgagaatt gcatcacacc
     1801 taaaactcga tgaacaatac catattcagt actgcttatt aaaggaataa aatggaagaa
     1861 aacctactgt cgacgccacc gaattttaag gtgtacaacg accgtgcaat ttacgttgga
     1921 acgtttttag gaggcccgtt agtggctggc tatttagccg cagaaaattt taaacaactc
     1981 ggacaacaag acaaagtaaa aataacctgg acaatcgcca ttggagtgac gattgcaata
     2041 tttgccgctg tatttctagt tcccgccata cagaaggtgc caaactatat aataccctta
     2101 atctatgcgc taatagcgca atttttggtg aaacgatttc aggggacaga aattaagacg
     2161 cacattgaaa acggcggaca agcttactca gtttggcgag cggtgtggat cggattaatt
     2221 ggcgcagtgg tattagtagc agtcattttt atgatcatcc tcttcttaga taaaaattat
     2281 ttacaataaa cttctgccaa catgcgtatt gcgacagcaa ggcaaggtag aacaacaatc
     2341 ggtagccaat cttcattcgg caacggttca gggctgatag ccgccgtcaa cttgattggg
     2401 gttaaataat taagctgcaa atgttatctt cagctgaata tttttttgac catttgttgc
     2461 gggtggacgt tgctgaatat cctcccatcg catggttccc ttaccagcaa ccctaatgca
     2521 gcgtttcgaa aacttaccat gcctatagta tatgaatttt aatttaaaat attttagagt
     2581 aattgtttct gtcattatct tgacattgct cataaattct tgcagaaaag accaaccaac
     2641 ttgtcatggt aactgtgccg ctattagcat aacaggaaat acctacataa agacaaataa
     2701 tgccgcgttg ccaaatgttc cggtagaagt aaattggttc cggaaaggat attgcatcgt
     2761 gtgtacgtca tataaagtcg cttcaggcga aacggatgat aatggaagat ttgatttgaa
     2821 tgtaacaatt gacacaactt tttttcacga ctatttccta agtgtcaggg ttccgatcga
     2881 tacaaactat ataacagtat caggtggtgg tggcgtaaac tacaatgaag tgcggttcga
     2941 tgcgttccac tcaaatgaac tacagaattt aaaatttgag ttttatccaa aaacttattt
     3001 aactatcacc cttcatcgga cactttccga cagttttaat tacttttccg ttaaccataa
     3061 ttttacaaac gagtttgatt acgccgacta tattattaca ggaccgcaat atgcaaatga
     3121 cacaacattt agagttacaa cttcagccga tatctacacg agaatagttt ggaggaaaac
     3181 tgttgttgcc ggacaatcaa acgaacaaat agattcgtta atatgcactc gcaatggaac
     3241 aaatgtcttt gatataaact attagcaaaa aacaaggcaa ccgctatccg gtgtatttgc
     3301 aaatccttta tcagcttttg ttctggcaac agtttaagcc taagctatta tcttccatgt
     3361 tagcttttca atctgcgcct aacgcaccgg caggaatatc cggtcatcgg aaataacttt
     3421 tcatgcggtg caaggaaaac gaaaattatc atcatgaaaa gtcaaaaaag acgattgacc
     3481 agtacagaca ttgaaaagtt cgttcatgag ggctttgtaa gaattgatga tgcatttcct
     3541 gtagagattg caaatgaatg tcgagctatt ttatggaaag caacaggatg tgaccctcac
     3601 aaccctgcaa gttggactca accagttatc agaattggtg aactggcact tgaaccattt
     3661 gtgaaagcag cgaatacggc catactgcat aacgcttatg atcaactagt aggcaaagac
     3721 aattggcacc ccaaaacaac tttgggttca tttgcaattc gcttcccgag tatgaaacct
     3781 tcacctgata caggatggca cgtcgatgca agttttcccg gcgaagacat caataattat
     3841 ttggaatggc gcataaattt ttattccagg ggccgtggat tgctgatgct ttttcttttt
     3901 tcagacgtat ccgacaaaga tgcaccaacc attataagac agggttcaca cctggacgtt
     3961 gcgaaaattt tgaaacccga aggagaaagt ggtctttcgt ttatgaagtt agctaaacga
     4021 cttgacgact tgccaaaacg acaagaggtg ctcgcaactg gtgaagctgg aacggtctat
     4081 ctatgtcatc cctttatggt ccatgctgcc cagcaccatc gtggtgttac gcccaaattt
     4141 atggcacaac ctcctttatt tactaagcat gatttcaata tcaaaaaacc agagaaggag
     4201 ctttgtccgg tagaaagggc gatatggatg ggactacaat gatgcgtgac cgctgacatt
     4261 aagattcccg tatttacttg catcagcaca caatttttaa cgagttttac ctttccgacc
     4321 gggctggtca ggcggtatcg cacaagacga gcttgatgag gtttaaaaaa atacattatg
     4381 aaaggaggta agatagcatg agaaaaataa ttgtcttatc aatgatctca ttggacggag
     4441 ttatgcaggc gcccggtgga ccgaaggaag atagatcagg cggtttcaaa tatggcggct
     4501 ggactgcacc ctacagtgat gaggtttatg gaaaggtggt gcaagaagaa ctcagacctg
     4561 cagattatct gttgggtaga aaaacatttg agatctgggc cgactactgg cctgcacacg
     4621 gtgacttttg gcccggtatt aatgaaggca caaaatacgt gttttccaaa aggatgaaaa
     4681 agcgggaccc gctaatcacc ggttggaaaa actcggtagt attaaaacgt gtggcagata
     4741 tcaaaaggat caaaaattca aacggtgttg acattcaagt ttgggggagc agtgagcttg
     4801 tgcagttgtt acttaaaaat gatcttgtag atgaactcaa actcaagatc cacccggtga
     4861 ctttaggtaa ggggaaaaaa ctttttggaa atggagcaat cccggcagca tttaaattaa
     4921 cagagagtat tgttacaaca acaggagtta taattgctca ctacaagcga gctggaaaag
     4981 tgaagacagg tactgtggga gcttaatgag atttcaggaa ccattcgttt cggttttgaa
     5041 gacaaacgaa ggtcgtaaac aaaaggggat gcgaaaggta atcgcagcaa tcaatatgac
     5101 acttgacggg ttttgcgacc acacggcgat gattgcagac gatgaaatac atcaacatta
     5161 cactgagctg ttgagtagca ccgacaccct tttgtacgga agaataacat accaacttat
     5221 ggaaagttat tggccaacgg tagtagcaaa tcctactggc aacacgccaa tcgatgaatt
     5281 tgcggaaata atagacaaca tttccaaagt tgtgttctcg cacacgctga agaatgt
//
LOCUS       DASQJI010000852         3828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2904490,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000852 DASQJI010000000
VERSION     DASQJI010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2904490"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..1227
                     /locus_tag="VEV83_22105"
     CDS             58..1227
                     /locus_tag="VEV83_22105"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYK47894.1"
                     /translation="MEFDNDRPVKRPYKIEILYWILLGLMNPLVSSLTIFLHDAKMWA
                     VVLLINLLVLPAYLFYSMTIVPRFLFQRKYIQFFALSVLFLISLQLVLFSIYSLILKF
                     SLSPPEQSYFTYTDGTIIRENLWSVINMSMAIGIYFIKKALDEKETLENLEKDNANFK
                     LKYLRSQLNPHFLFNTLNSIYALSMQKSDKAPEVVVKLSDLMRYLIYDCNEERVPLSK
                     EIEFIQNYIEIEKIRYKADVRFSVEGETEGIMIEPFLFISFIENGFKHAFDSAYTNAF
                     IYITIKVLPDQIELSVVNNTSIDLETQAKRVNGTGLKNSKGILDLLYPTTHALNIIQT
                     EKEENRTSELRIRNAKKRLESLYPDSHTLDVILSNNAFTVSLIIKPGLLDKVHHS"
     gene            1205..1912
                     /locus_tag="VEV83_22110"
     CDS             1205..1912
                     /locus_tag="VEV83_22110"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYK47895.1"
                     /translation="MIRCIIVEDETLAQNVIQSHLQRTPGFELVGICNNALEATETLS
                     KHDVDLIFLDVQLPGMTGLNFLRTLQDPPLVVLTTAHAEYALESYEFNVIDYLLKPIS
                     FERFSKTVNKIVDGKLFTQAAKEKQTWPHDHIFIKSSGKFFKVNFSEIVYVESMKDYL
                     KIYTADYRLITHQTMNEMEKMLPAKQFMRVHKSYIVSLAHIKTIQTNNIEVGKAFIPI
                     GSNYKEKVMSLTGRRTQ"
     gene            2319..3341
                     /locus_tag="VEV83_22115"
     CDS             2319..3341
                     /locus_tag="VEV83_22115"
                     /inference="COORDINATES: protein motif:HMM:NF022732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3089 domain-containing protein"
                     /protein_id="HYK47896.1"
                     /translation="MTNRVVLFLVFLSNISCYNMFAQPHFVTSASTASASVVDYSLLD
                     NWAAHPWKKDPSDSVPLPLQRNYHPDSTVDIFFLHPTTYTGEKKFGWNAPVDDEALNK
                     KTDGSSILYQASIFNEAGRVFAPRYRQAHYDVFFTSDTATARAALDTAYADVKAAFEY
                     YLQHYNNGRPIVIASHSQGTTHAKRLLKEFFEGKPLQNQFVVAYLVGMQVEPDYFTTI
                     PVCKTPAETGCICSWRTFKEDYEPPYVQHETFKAVVTNPLTWDSKLLSAPRDSNMGAV
                     LLKFNKVLPGAVNAEVHDGVLWTEKPHFSGNIFLTTRNYHIADFNLFYTNVRANVRQR
                     VQCFYR"
     gene            complement(3355..3753)
                     /locus_tag="VEV83_22120"
     CDS             complement(3355..3753)
                     /locus_tag="VEV83_22120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47897.1"
                     /translation="MPLNIKLEDLVTRGKQAESDEDPEQAAKFYEQALKEQPVDPYPY
                     ERLMIIYRKLKRSRDELRVINTGLKNLRASNKQRQQKTVGRNSTIKTLSQALMKSSGL
                     IDKKGNLLYEPEPIPKWEKRKSVVEKKLKK"
BASE COUNT         1110 a          789 c          817 g         1112 t
ORIGIN      
        1 gaaatgatgt atgcaagtga attgaagcga gtagtttagt cctcacaaac gccgataatg
       61 gaatttgata atgacaggcc ggtcaagcga ccatacaaga ttgagatact ctattggata
      121 ctgcttggtt taatgaatcc acttgtaagc agcctcacca ttttcctgca cgatgcgaaa
      181 atgtgggctg tggtgttgct catcaaccta cttgtcctgc ccgcttatct gttctactcg
      241 atgacgattg tgccaaggtt tttgtttcaa agaaagtaca ttcagttttt cgcgttaagt
      301 gtactgtttt tgatcagtct gcagcttgta ttattttcaa tttactcgct tatactgaag
      361 ttttcgctgt cgccgccaga gcaatcatac tttacgtata cggacggtac catcatcagg
      421 gagaatttgt ggagtgtgat taacatgtcg atggccattg gcatttattt tatcaaaaag
      481 gcgctggatg aaaaagaaac acttgaaaat ttggagaagg ataatgcgaa tttcaaattg
      541 aaatacctgc gctcgcaact gaatccacat tttcttttca acacattgaa cagtatttat
      601 gcgcttagca tgcagaaatc agacaaagcg ccggaggttg tggttaaatt atcagacctg
      661 atgcggtatc ttatttatga ctgtaatgaa gagagagtgc cgctgagtaa agaaattgaa
      721 tttattcaaa actacattga gatcgaaaag atcaggtata aagctgatgt gcgttttagt
      781 gtagaaggcg aaacagaggg aatcatgatc gagccgtttc tctttatttc atttattgaa
      841 aatggattca agcacgcgtt cgatagcgct tatacaaatg catttattta tatcacgata
      901 aaagttctgc cagaccaaat agaattgtcg gttgtaaaca acaccagcat cgacctggaa
      961 acacaggcaa aacgggtgaa tggcaccggg ctgaaaaaca gtaaaggcat actcgatcta
     1021 ttgtacccta ctactcatgc tctcaatatc attcaaacgg agaaggaaga aaacaggacc
     1081 agcgaactgc ggatccgcaa cgccaaaaaa cgactggaga gcctctatcc ggattcccac
     1141 acacttgacg taattttaag caacaatgct tttacggtat cgttaataat aaaacccggc
     1201 ttacttgata aggtgcatca tagttgaaga cgagacgctc gcgcagaatg taattcaatc
     1261 gcatttacag agaacaccag gattcgagct ggttggtatt tgcaacaatg ctttggaagc
     1321 aacggaaacg ctcagtaagc atgatgtgga tcttattttc ctcgatgtac agttgccggg
     1381 aatgacgggc ctcaattttt tgcgaacgtt gcaagatcct ccgcttgttg tgctaacgac
     1441 cgctcacgcg gaatatgcgt tggaaagtta tgagttcaat gtcattgact acttgctaaa
     1501 gccgatctcg ttcgaacgat tttcgaaaac ggtcaacaaa attgttgacg gaaaattatt
     1561 cactcaagct gcgaaagaaa agcaaacctg gcctcacgat catatattca taaagagcag
     1621 tggcaaattt ttcaaagtca atttctccga gatcgtttac gtggaaagca tgaaagacta
     1681 tttgaagata tatactgcgg attacaggct gataactcat caaaccatga acgagatgga
     1741 aaagatgttg cctgcaaaac aattcatgcg cgttcacaaa tcatatattg tttcgctggc
     1801 tcatataaaa accatccaaa cgaataacat tgaagtgggt aaagctttta tccccatcgg
     1861 cagcaactat aaagaaaagg tgatgagttt aacggggaga agaactcaat gaaaatcttg
     1921 aaggggttcg tgcataggtt caactccatt tctgttcttc cagacttctc tttcgaacaa
     1981 ttctaacttt attgccagta acgcgtcgtg ttattacaat taaagattcg atgaacgttc
     2041 aacttagtga aacttcgtgc cttggccccc ttactggttt ctgatgttct gaaccacaaa
     2101 ggctgcaagg cagaaagaca cacgaagaag aataagctgg cactttagaa tcatagcaca
     2161 acaggtaaaa agtaatttct tttctcccga ttaataatcc caataacgaa tgagcatgtt
     2221 gaccatgcct cagcataaaa aataatttat aagttaatta actcccgaag tggaacggta
     2281 ataaatttca agcgaaagcg ttatgataga tttgatctat gacaaatcgc gttgtattgt
     2341 tccttgtatt tttgtctaat atttcgtgtt acaacatgtt tgcgcaacca cattttgtaa
     2401 cctctgcgtc aactgcttcg gcatctgtcg tggactacag tctactggac aattgggccg
     2461 cccatccatg gaaaaaggat ccatccgaca gcgtgccttt gccgcttcag cgaaattatc
     2521 atccggattc aacagtcgat attttttttc ttcacccaac aacttataca ggagaaaaaa
     2581 agtttggctg gaacgcgcct gttgatgacg aagcattgaa taaaaaaacc gatggctcgt
     2641 cgatcttata ccaggcaagt atcttcaatg aagccgggcg tgtgtttgct ccacgttatc
     2701 gacaagctca ttatgacgtt ttttttacga gcgacacagc gaccgcccgt gctgcgttgg
     2761 atactgccta tgcagatgta aaagctgcat ttgaatatta cctgcagcat tacaataacg
     2821 gacggcctat tgtgattgcg tcccacagcc agggaacgac acacgcaaaa cgtttgctca
     2881 aagagttttt tgagggcaaa ccgttgcaaa accagttcgt ggttgcttac ctggtcggca
     2941 tgcaggttga accggattat tttactacga ttccggtttg caaaacaccg gcagagacag
     3001 gttgtatctg cagttggcga accttcaaag aagattatga gccgccgtat gttcaacatg
     3061 aaacgttcaa ggctgtcgtt acgaacccgc ttacctggga tagtaaattg ctttcggctc
     3121 caagagattc aaacatggga gcggttctgc tcaagtttaa taaggtgctt cccggtgcag
     3181 taaacgcaga agtgcatgat ggcgtcttat ggactgaaaa gcctcacttc tccggtaata
     3241 tttttttaac gacgagaaat tatcatatcg cggattttaa tttgttttat accaacgtga
     3301 gagcgaatgt gaggcagcgg gttcagtgct tctatcgata gaagtttcgt ccggtcattt
     3361 ttttaatttc ttttctacga ctgattttct tttctcccat ttaggtatag gttccggttc
     3421 atacaaaaga tttcccttct tgtcgatcaa gcctgagctt ttcatgagcg cctggcttaa
     3481 ggttttgatc gtgctatttc tgccaaccgt tttttgttgg cgttgtttat tgctcgcgcg
     3541 cagatttttt aacccggtat tgatcacacg cagctcatcc ctggatcgtt ttagcttgcg
     3601 atagattatc atcagccgct catacgggta tgggtcaacc ggctgttcct ttaaagcctg
     3661 ctcgtaaaat ttcgcagctt gctcagggtc ttcatcagac tcggcctgct ttcccctggt
     3721 tacaagatcc tctagtttta tatttaatgg catagtacgg atgggtgtgt aacgcgataa
     3781 aaaattgaca acaatttacg tacgtttttt aaatataagt accttcac
//
LOCUS       DASQJI010000853         6952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1984162,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000853 DASQJI010000000
VERSION     DASQJI010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6952
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1984162"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..3305
                     /locus_tag="VEV83_22125"
     CDS             282..3305
                     /locus_tag="VEV83_22125"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HYK47898.1"
                     /translation="MRARFQNILLYSLLLISVYARSEKIPYKRCSVKTLNYEQGLLNN
                     SITDIITDPNGFTWVSTYTGLQRYNGYSLETINPVVNKKTIIINYPVHFFGLADGHIW
                     ISYKQGIVEYSSDSNSFRNLLKVPAKSFFAIVPLMETATGIWCLQQDKGIVLYNRLGS
                     LVKNIPMPGPAFFNDLLFSSTILFSNVISSNDRFIYIRQDENNIIQIDTKTERYQIVP
                     FNGFVRAVGCSKNNLYVISDKGLFSRNIYTAGPFKNILGRKLPDENIGNGSILVDSTG
                     RIFFSVNRHFYEIDTPGSNLQEFTQLNKELILSTGTIQKIYVDKFKRIWLLTNNDIKR
                     IQDVNVPFDEFSYPNEKNNFIRSIYFDEDRHIIVAGAYNGTLQLYDTTANQLLETPLV
                     NTAAGYILSIQKLSPDEYLLYTYGNGFFIFNLKQKTIRSLPEFKTLFENNNFENNTLR
                     INDSTILISTSKDVYRCVIINGRIASVTPLFPAHAAANERLGCFICNSKNTIWVGTLQ
                     GSVVKVDASGNYKKFAVPEGFVVRSITQTNENRIWVGTEQALYVFDTTGKLIRSFTRE
                     TGLLNDCIYALLPAGTDEVYASTNFGLSYVREDGTIRNFTKELGLQENEFNTGAAMKT
                     RAGKFFFGGVNGITAFYPAKLSNAGDLPVINITRFIVNDSLVVQSSKVSKQDTVVLRY
                     DQNRLQLDFAALGVFNNTDYEYDYRLKGFEESWQHTHQPTGIKYNLAPGTYTLEIICR
                     PMLSFNSSFTKNMTIIITPPFWKTWWFELAAVLIFSTLLFVSIRYYNRRKYVAKIREL
                     QSQQEMQRERERISRELHDNIGSQLSFISSNIDWLIDRDQKLKADEKADQMKAINKTA
                     KNIMMNLRETIWALNKETISVSEFSDKLKAYIIHVIELRPEIKFTSEEHISENIGFTS
                     AETLNIFRICQEIVTNVMKHANASVLKLSISSDENRFFIQIEDNGSGFDTDEKKNGHY
                     GLENIRFRAKELGADLVIESEQSKGTSVSIARVGK"
     gene            3358..4032
                     /locus_tag="VEV83_22130"
     CDS             3358..4032
                     /locus_tag="VEV83_22130"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYK47899.1"
                     /translation="MKIPIAIVDDRSQNRLSLAERINVSDDISVNFTASNGADFLDQM
                     KRTSPLQLPQVVLMDIEMPVMDGIEAVRLGKQLYPDVKFLMLTVFDDDDKIFEAIKAG
                     ASGYLLKDEKVSTIIEYVHQLSEMDAAPMSPSIARKALNMLVRRPEIQQPMNEELPSM
                     QSNLSQRETEILRLLVDGYDYRSTAEKLFLSTHTVRKHIANIYEKLHVNSKAKAISVA
                     TKNKLL"
     gene            complement(4057..5010)
                     /locus_tag="VEV83_22135"
     CDS             complement(4057..5010)
                     /locus_tag="VEV83_22135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYK47900.1"
                     /translation="MQTRNYSRRKFLQTTAGLLPVTLAGLSFNSKKYKPLLSFSTLAV
                     PDWPFEKIVEFAAANNYDGIEFRGIQRELDLTKCSAFSSPQSIETSKNLLKQKNIKFV
                     DLNASAEMHHPEGDERQKNLAEARRFIDLAQQLGCPYIRVYPNEVLKEPETETSIELI
                     VQGLLELGDYAKDKNVIVLMETHCLHPQTNPSSLYIANLQNIMKRAEHPHVGLVWDPY
                     NMWTVTKESVTEMYTALKKYIRHAHIKDAKSVDGKYQFVLLGEGDTPILQAVDLLAKD
                     HYSGYYSFEWEKLWHPEIADGEIALADYAKTMQRHFEGLKL"
     gene            complement(5222..5626)
                     /locus_tag="VEV83_22140"
     CDS             complement(5222..5626)
                     /locus_tag="VEV83_22140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47901.1"
                     /translation="MPFLMITMNSQVASLFVLAIPVACIAWTVTHEEIFSELKKYCVR
                     CSEKSTNILARKFFYLFTCEYCFSHYVTALMLVITKYHLLYDDWKGYLVSFFSVVWIA
                     NIYMSLYGRIRVTLKKERIEAEIIEEEKKNTV"
     gene            5706..6173
                     /locus_tag="VEV83_22145"
     CDS             5706..6173
                     /locus_tag="VEV83_22145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2169 family four-helix-bundle protein"
                     /protein_id="HYK47902.1"
                     /translation="MENNNKTTEVLNDLIQINNDRINGYERALNELKDEDNDLRALFT
                     NFIDQSRQIKMALGKEVQVLGKDMDTGTTASGKIYRAWMDVKALFSGHSRHAVLENCE
                     FGEDAAQKAYKTALETEGLPAYIFALLNKQKAELKTAHDEVKALRDQEKYTEA"
     gene            complement(6175..>6952)
                     /locus_tag="VEV83_22150"
     CDS             complement(6175..>6952)
                     /locus_tag="VEV83_22150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HYK47903.1"
                     /translation="KALQTIAKNLDRQISKGAVTEEQKKEALSNISTFTDLQEGVQDA
                     DLVVEAATENTELKLKIFKEIDDSAPGSAILATNTSSISITKIASVTKRAEKVIGMHF
                     MNPVPVMKLVEVINGFATDASVTETVVELSKQLGKVPCVVNDYPGFIANKILMPMINE
                     AISSLYEGIAGVEEIDTIMKLGMAHPMGPLQLADFIGLDVCLSILNVLHDGFGNPKYA
                     PCALLVNMVTAGRLGVKTGEGFYTYTPGSKELAVSGRFLK"
BASE COUNT         2070 a         1538 c         1476 g         1868 t
ORIGIN      
        1 gtagtaactt tccaccagtc ctggtcgccg gccggattga tgacgccggt gttgttgccg
       61 ttcaatgcaa gcgtatttgc agatgccctg tcattgttcg gttcggtctc agcggctctt
      121 gaagcgctta tgagaatgaa gaaaaaagca gttagtaaaa gtttctgttt catgatttac
      181 acgtttatgt acaaacacac cgggaatcag aacccaaatc tggaatattc catcagccgg
      241 aacaataacg catttgtatt atttttagaa agtaatttgc tatgagagca cgctttcaaa
      301 acatactgct atactccctg ctgcttataa gcgtctatgc gcgcagcgaa aagattccgt
      361 acaaaagatg ttcggtaaaa acgctgaatt atgagcaggg attattaaat aacagcatca
      421 ccgatatcat caccgatcca aatggattca catgggtttc aacatatacc ggccttcagc
      481 gatacaacgg ctattcgctg gaaacgataa accctgtggt caataaaaag acgatcataa
      541 taaattatcc cgtccatttt tttgggctcg cggatggcca tatctggatc agttataaac
      601 agggaattgt tgagtattcc tctgactcga attctttcag gaatcttttg aaagttcctg
      661 caaaatcttt tttcgcgatc gttccgctaa tggaaaccgc gactggcatc tggtgcctgc
      721 aacaggataa gggaattgtc ctttataaca ggttgggctc gctcgtaaaa aatattccaa
      781 tgcccggtcc tgcatttttt aacgacctgc tcttttcatc aacaattttg ttcagcaacg
      841 tgataagctc gaatgatcgg ttcatctata tccgccagga tgaaaacaac atcattcaaa
      901 ttgacacgaa aactgaacgt tatcaaattg ttcctttcaa cgggtttgtt cgggcggttg
      961 ggtgcagcaa gaataacctg tatgtaatat ccgacaaagg cttattcagt cgaaatattt
     1021 atacagccgg acctttcaaa aatattttag gcagaaaact tccggatgaa aatattggca
     1081 atggatcgat acttgtcgat tcaactggaa gaattttctt tagtgtcaac aggcattttt
     1141 acgagataga tacgcctgga agtaacctgc aggaattcac acaacttaat aaagagctga
     1201 tcctgtcgac cggaacgata caaaaaattt acgttgacaa attcaagcgt atctggctgc
     1261 tcacgaataa tgacattaag cggatacagg atgtaaatgt gccgttcgat gaattcagtt
     1321 atccaaatga aaaaaataat tttatacgca gcatttattt cgacgaggac cggcacatca
     1381 ttgttgcggg tgcttataat ggaacactac aactatacga tacaaccgcg aatcagctcc
     1441 ttgaaacacc gctcgtgaat accgccgccg gttacattct ttcaatacaa aaattatcac
     1501 ccgacgaata cttattgtac acatacggca acgggttctt tattttcaat ctgaaacaaa
     1561 aaacgatacg ctcgttgccg gagtttaaga cgctgtttga aaacaacaat ttcgaaaata
     1621 atacactgcg cataaatgac agtacgatcc ttatatccac ttcgaaggat gtttatcgct
     1681 gtgtaattat taatggccgc attgcatcag tcaccccgct atttcccgct catgccgcag
     1741 cgaatgaaag gctcggttgt tttatctgca attctaaaaa cacgatctgg gtgggaacgc
     1801 tgcagggaag tgttgtaaag gtggacgcgt ccgggaatta caaaaagttc gcagttccgg
     1861 agggcttcgt tgtccgaagt attacgcaaa caaatgagaa ccggatctgg gttggcaccg
     1921 aacaagccct ttatgttttc gacacaaccg gaaaactgat acggtccttc acgcgtgaaa
     1981 ccgggctgct gaacgattgt atttatgccc tgttgcccgc cggcacggat gaagtgtacg
     2041 caagcaccaa ctttgggttg tcgtatgtac gggaggacgg aacgatcagg aatttcacaa
     2101 aagaacttgg cctgcaggaa aatgaattta atacaggcgc cgccatgaaa acaagagctg
     2161 gtaaattttt cttcggcggt gtgaatggca ttactgcttt ttatcccgcg aaactttcca
     2221 acgccggcga cttgcccgta ataaacatca cgcggtttat tgtaaatgat tccctggttg
     2281 tgcaatcttc aaaagtatcg aagcaagaca ccgtcgtgct tcgatacgat caaaaccgtt
     2341 tgcaactgga ttttgccgca ttaggagttt ttaataacac cgactatgag tacgattatc
     2401 gtttgaaggg ttttgaagaa agctggcaac atacgcatca accgactggt attaaatata
     2461 acctggcgcc cggaacatat actctcgaaa ttatttgcag accgatgctc tccttcaaca
     2521 gttcgtttac aaagaatatg acgatcatta tcacaccgcc tttctggaaa acctggtggt
     2581 ttgagcttgc cgctgttttg attttcagca cactgctgtt cgtcagcata cgctattaca
     2641 accggcgcaa gtatgttgct aagatcaggg agctgcagtc acaacaggag atgcaacggg
     2701 aaagagaacg cataagccgc gagttgcacg ataatatcgg ctctcaactc agtttcatca
     2761 gcagcaatat tgattggttg atcgacaggg atcaaaagtt aaaagccgac gaaaaagccg
     2821 accaaatgaa ggcgatcaac aaaacggcga aaaatataat gatgaacctg cgggaaacaa
     2881 tttgggcgct caacaaagaa acgatctcag taagtgaatt ctctgacaaa ttgaaggcat
     2941 acatcatcca cgtgattgag ctgagaccag aaataaaatt tacctccgaa gagcatatat
     3001 cagaaaacat tggtttcacg tcagcggaaa cgctcaacat ttttcgcatc tgccaggaaa
     3061 ttgtaaccaa tgtgatgaag catgcgaacg cgtctgtttt aaagttgtct atctcttccg
     3121 acgaaaacag gtttttcata caaatagaag ataacgggag cggatttgac acggacgaaa
     3181 agaagaacgg gcactacggg cttgaaaata ttcggtttcg tgcgaaagag ttgggtgcag
     3241 acctcgttat agaaagcgaa cagtcgaaag gcacttctgt ttcaatcgcc cgcgtgggca
     3301 aataatacaa atgagttatt gaaaacggat attaaataaa ccacttttga cggttgtatg
     3361 aaaattccca ttgccattgt tgatgatcgt tcgcaaaacc gtttatcgct tgcagagcga
     3421 ataaatgttt cagacgacat atctgtgaac ttcactgcat caaatggcgc cgattttttg
     3481 gaccagatga aaagaacgtc gccgttgcag cttccgcagg tcgtgctaat ggacatcgag
     3541 atgccggtaa tggacgggat cgaggctgtc cggctcggca aacagttata cccagacgta
     3601 aaatttctga tgctgactgt ttttgacgat gacgacaaaa tattcgaagc gataaaagcc
     3661 ggagcaagcg ggtatttact gaaggatgaa aaggtgtcga cgatcattga gtatgttcat
     3721 cagctcagtg aaatggacgc agcgccaatg agtcccagca ttgcgcgaaa agcactcaat
     3781 atgctcgtgc ggagaccgga aattcagcag ccgatgaacg aagaattgcc atcgatgcaa
     3841 agtaacctca gccagcgcga aacggaaata cttcgtcttc tcgtcgacgg atacgattac
     3901 cggtccactg ccgaaaaatt attcttaagc acgcacacgg taagaaaaca tatcgcgaac
     3961 atttacgaga agctccacgt taattcgaaa gcgaaagcaa taagtgtggc gacaaaaaac
     4021 aagttgctgt aatttaatgt ggaaccattt gcgtagctac aatttcaacc cctcgaaatg
     4081 ccgttgcata gttttcgcat aatctgcaag tgcaatttcc ccgtcggcaa tttccggatg
     4141 ccataacttt tcccattcga agctgtaata accactgtag tgatctttcg ccaataaatc
     4201 cacggcttgc aaaatcggtg tatctccttc gcccagtaat acaaattggt atttcccgtc
     4261 gacggacttt gcatctttta tgtgtgcatg tcgaatgtat ttctttaaag cagtatacat
     4321 ttcggtcacc gattctttgg tgaccgtcca catgttatag ggatcccaaa ccaaaccgac
     4381 atgaggatgt tccgcacgct tcatgatgtt ttgcaggttc gctatataca atgagctggg
     4441 attcgtttga ggatgcaggc aatgcgtttc cataagcacg atcacgttct tgtctttggc
     4501 ataatctcct aactccagca ggccttgaac aatgagctca atgctcgttt ctgtctccgg
     4561 ctcttttaaa acttcatttg gatacaccct gatataagga caaccaagtt gctgcgcgag
     4621 gtcaataaag cgcctggctt cggcaagatt tttctgtcgt tcgtcgcctt cagggtgatg
     4681 catttcagca gacgcattca agtcaacgaa ctttatgttt ttctgcttca gtaaattttt
     4741 cgatgtttca atgctctgcg gactgctgaa cgcggaacat ttagtaagat cgagctcgcg
     4801 ctgaatgccc cggaattcta ttccatcata attattggct gccgcaaact caacaatttt
     4861 ttcaaacggc cagtctggaa ccgctaaagt ggaaaatgat aacagaggtt tatatttttt
     4921 actgttgaat gaaagcccag ccaacgtgac tggcaataaa ccggctgttg tttgtaagaa
     4981 ctttctgcgt gaataattcc ttgtctgcat gaactaaaag taggaaattc cggaagagga
     5041 agataccaaa ttcacttttg attagtttcc aaacgtaaac ccgagaactt gttgaaattt
     5101 ttaatgtggt tcaaacataa aacctccatg aatactgcta attggatact ggcttcttca
     5161 gagatttctc ctggcgtcga aatggcggtt gctgaaatct tcaaacatca aacatcaaac
     5221 ttcaaacggt atttttcttt tcttcttcaa tgatctccgc ttcgatcctt tccttcttca
     5281 acgtcacccg gatcctgcca tacaaactca tgtaaatatt cgcgatccat acaacggaaa
     5341 aaaacgaaac caggtatcct ttccagtcat cgtaaagcaa atgatatttt gtgataacaa
     5401 gcatcagcgc agttacatag tgactaaaac aatactcaca cgtgaacaaa taaaaaaact
     5461 ttcgggccag tatatttgtg cttttttcgc tgcaccgcac acaatatttt ttcagttctg
     5521 aaaatatttc ttcgtgtgta accgtccacg caatgcatgc tacgggaatt gctaatacaa
     5581 ataacgaagc aacctggcta ttcatggtga tcatgagaaa aggcatgcaa atactattct
     5641 taaatttttt tggcacacgc gccgcattgc tggcacgaaa ttttatctac atacaaaaac
     5701 tttttatgga aaataacaac aagaccaccg aagtgttgaa tgacctcatt caaatcaata
     5761 atgaccggat aaacggttat gaacgcgcac tcaatgaatt gaaagacgaa gacaatgatc
     5821 tgcgcgcttt atttaccaac ttcatcgatc aaagccgtca aataaagatg gcgttaggaa
     5881 aagaggtgca ggtgttagga aaagacatgg acacgggcac aacggccagc ggtaagatat
     5941 acagggcatg gatggatgtc aaagctctat tttcaggcca tagccgccat gccgttcttg
     6001 aaaattgtga atttggggaa gatgctgctc aaaaagcata taaaactgcc ctcgaaacag
     6061 aaggccttcc cgcatatatt ttcgcattgc ttaacaagca aaaagcagaa ttgaaaaccg
     6121 cgcatgatga agtaaaagcc ctgcgcgacc aggaaaaata tacagaggca taagttattt
     6181 caaaaaacgg ccactgaccg caagctcttt actgccgggt gtatatgtgt aaaaaccttc
     6241 gccagttttt acgccaagtc gcccggcagt aaccatgttt accaacaagg cgcatggggc
     6301 gtattttgga ttgccaaaac cgtcgtggag cacattcaaa atagaaagac acacgtcgag
     6361 cccgataaaa tcagcaagct gcagcggccc catcgggtgt gccataccca gtttcattat
     6421 agtgtctatt tcttccacac cggcaatgcc ctcgtacaaa ctggagatcg cttcgttgat
     6481 catcggcata agaattttgt tcgcaataaa gcccgggtaa tcattcacca cgcatggcac
     6541 ctttcccaat tgtttgctca gctcaaccac cgtttctgta actgacgcat cggtggcaaa
     6601 tccattgatc acctcgacga gcttcatcac tggcaccggg ttcataaaat gcataccgat
     6661 aactttttct gcacgtttcg taacggaggc aattttggtt atcgagatgg acgaagtatt
     6721 ggtcgcgagg atcgctgagc cgggggcgct atcatcaatc tctttaaaaa tttttaactt
     6781 aagctcagtg ttctcggtcg ctgcttctac aaccaggtca gcatcctgca ctccttcctg
     6841 caaatcggta aacgtagaga tatttgacaa tgcctctttt ttctgttctt ccgtaacagc
     6901 acccttgctg atctgacggt caagattttt tgcgatcgtt tgcaatgctt tc
//
LOCUS       DASQJI010000854         9809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1062991,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000854 DASQJI010000000
VERSION     DASQJI010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 9809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9809
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1062991"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VEV83_22155"
     CDS             <1..416
                     /locus_tag="VEV83_22155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47904.1"
                     /translation="AGNNFKTRITSLLPFAYALVGILYLGLQLKNLYPDYSIENMHRT
                     IQQPWVTIWGLLSILFWIPALAKKPLLSLSHSLIFFILLLKDLFSQISAPTTDMVRND
                     MNVYTVSLLVNLAAIAFMLLQSFLYTRFKNRKLVK"
     gene            955..1806
                     /locus_tag="VEV83_22160"
     CDS             955..1806
                     /locus_tag="VEV83_22160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47905.1"
                     /translation="MKLISNKTLMVLLILASGYGYIASCTHDDIVPPAQATQTPIITR
                     GNVVLLPGDMTPGDTTEWKLDKVHSSVLWSTAYVGAAGLLTGRFNQFGMHQVTEPEML
                     QYTITGQPLKDTSWAFYENDPSKTYINGYVQINTSNTGEPGRDAGCNVSGLSTIPIIT
                     GVQNLQPVNLAKIKSTKVEFDPLSNDYIVTLDLTWHSHNDTLANSSPDYTYDPNLPAS
                     SMITKSIVGRLKYIPKATVVPTTGTPYSVFGLQLTFQFNCRDFQISSTSIADVIDIEC
                     NMNFNNK"
     gene            1824..2207
                     /locus_tag="VEV83_22165"
     CDS             1824..2207
                     /locus_tag="VEV83_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47906.1"
                     /translation="MKKLIIIAGLIVIAGITITGCYTDVIMPQAPTDPNGPPQAVSYK
                     NDLSPMFATKCALAGCHVSGGHHPYMTPDVSYYQIVNGGYVNTEIPDQSILMIMLRGE
                     MGQYMPSSSDQQKVYDWIRNGAPNN"
     gene            2229..3239
                     /locus_tag="VEV83_22170"
     CDS             2229..3239
                     /locus_tag="VEV83_22170"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HYK47907.1"
                     /translation="MKLKIYRPVCRFTIKLSLVSVLFLSFVTLNAQDSSAVNEPPAAP
                     AKVKPVKNTFQSIWIIDNQTVMVPIKGTLEFDFQHRMGVIDWDDHPSRDLFGLYGSAN
                     IRLGVNYTPKEKLSVGIGITKTKMLLDLNAKYAIIKQTNGQYPVSVTWYGNAAVDTRP
                     KEDVTLYNGEPIKHNSDRYTYFNEIIIARKINDKLSIQVSPSWSHQNAVWGYYTSYDT
                     ATKLYGDKYKSMNHEHFAVAVSGRYKFSNLCSILFNYDQPLTEHNQYNPNPNLSLGLE
                     VNTSSHSFQVFFTNYKLLNPQQNNMYNQNNPFDSYTDANGKEHGKYQYLIGFNITRLW
                     NY"
     gene            3335..3877
                     /locus_tag="VEV83_22175"
     CDS             3335..3877
                     /locus_tag="VEV83_22175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47908.1"
                     /translation="MQKKMTTLNHQLIAIAFLPVLLLGIASCKDNKPAAKRITNDADS
                     GSEKIKAVFHKPRSSFQDTMKIQGEAAVFYAPDEQQLEKIKRQTNNPGAFGASNSEYV
                     HMMENARKVIRNTWPGLQIVDAKNYRYILFIKKDGGKECIDLDKYDDMDGLFVFDGKK
                     SAMLIDAMNVETEVGSYLNP"
     gene            4013..4429
                     /locus_tag="VEV83_22180"
     CDS             4013..4429
                     /locus_tag="VEV83_22180"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYK47909.1"
                     /translation="MKRKLIATVTIMFAGLFTYVMISGFRPAQNKPWAVPDNYKSMKN
                     PVASNAESIAEGKELYATHCKSCHGSKGLGDGSKAAQLKTEPGDFAKADFQAQSDGAL
                     FYKTSEGRDDMPSFKKKIPDADERWSLVNYLRTLKK"
     gene            4525..4782
                     /locus_tag="VEV83_22185"
     CDS             4525..4782
                     /locus_tag="VEV83_22185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47910.1"
                     /translation="MEQPKKTSTRKQFLLWSATVLSSLTLLKFTPGNKRKKTDTVKML
                     TQDGKLVEVDIEKLSGSKGSKITDDQLKNWVNKTQEQTKLL"
     gene            4792..5733
                     /locus_tag="VEV83_22190"
     CDS             4792..5733
                     /locus_tag="VEV83_22190"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HYK47911.1"
                     /translation="MENDNRSRRQFLTAGVVAAVAAGCSSKKNPFAGYAADDAKASGE
                     KVKLLSVDGEIIEIDKAFLKPVPDLPPVSNKEERRGIAGKKFVMVIDLSRCKNVGACK
                     KACNHAHELTPGENWIKVLAMQDAEHTAPYWQPTTCMHCDEPPCVKVCPVDATFKRQD
                     GIVLIDSDRCIGCRFCMAACPYTTRVFNWGEPDLPKEVAEKPYSCETSLPQKKGTVGK
                     CDFCADMTRMGELPHCVSACPNGVFFFGDMNEDSVTNGAETFRFSDLIRDKAGYRLME
                     DLGTKPRVYYLPPVNRNFPFESGEENESDDDKKKDVK"
     gene            5739..7115
                     /gene="nrfD"
                     /locus_tag="VEV83_22195"
     CDS             5739..7115
                     /gene="nrfD"
                     /locus_tag="VEV83_22195"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HYK47912.1"
                     /translation="MKNLTALTGEQITRDLLPQKFGKRGLIWTGVLVLIALIGAFAYY
                     RQLRYGLVVTNMRDYVSWGIYISNFVFFVAISLVGSLITAILRLANVEWSTPLTRIAE
                     IIAVSAIVFASIIIIVDMGRPERFLNLFIHGRLQSPIMWDVIVIGTYFFISLLLLYFP
                     LLPDLKILIQFKEKTGKALNKLYRFQGSFWKGTKAQFKISNRAINILCVLIIPVAFSI
                     HTVTSWLFATTYRPGWDSTNFGAYFISGAFLVGAGGVVVAMYVFRRYYHLEKYITEKH
                     FEKMGRVVVLLALLYLYFNINEYLVPAFKMKKPEEAHLTQLFAGQYALLFWFCILVGM
                     ILPMAILLFRKGRKPLPAFIAGVMVVVGAWFKRYLIVTPTLLHPFLPMRDVPESYHHY
                     FPSWEEWAIAMGSLAGALLVITFFARIYPIIPIQETITEQNESERIFSIIHSEESTTE
                     QYEKEEQK"
     gene            7093..7992
                     /locus_tag="VEV83_22200"
     CDS             7093..7992
                     /locus_tag="VEV83_22200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47913.1"
                     /translation="MRRKNKNKMMVVAVALLIAGPFRVFAQDSTKSELVMTVSYFMNN
                     NKLAYLTVNTKTKIEKKFQPVQGVIVDLYLDSDSAANVVGKVTTNEKGLAKAIMPPAL
                     KNVWDSAASHTFIGVSEPTKQFDATRAEAAMTKTKITIDTATDAETKNITVTVLALQD
                     GEWVPAKDVEMKVGIARSGGSILSAGDEETYTTDSTGTVTAEFKRDSLPGDEKGNIIL
                     AAKVEDNDQYGNLFVEKTVPWGVALKPETNFFDQRTLWTTRFRTPFWLLFMAYSIVIA
                     VWGTMIYLVWQIVKIKKLGTQEG"
     gene            complement(8201..9019)
                     /locus_tag="VEV83_22205"
     CDS             complement(8201..9019)
                     /locus_tag="VEV83_22205"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK47914.1"
                     /translation="MKNDFYRDKVVVVTGGSSGIGLALAKQFAQQHARLILIARDEEK
                     LQAAKIIAEKNGAASVFPISIDITDNAAVIATIKKIAEQFEKIDVVINCAGIMTCGRF
                     KDQPVKNLERCLLTNYLGAVYISKAAWPWLKKSEGQLSFVSSVAGYMGLIGHSSYAPS
                     KFAIVGLAECLRMEAKDDNIRVSVIYPPDTDTPMLRYERKHTLPESTALSKSIKEKSP
                     DKVAEIYLKGLQQNKFEIYCDIDSRAVRLLKNNFPGLVFSVTQRIIRKARKKAG"
     gene            complement(9021..>9809)
                     /locus_tag="VEV83_22210"
     CDS             complement(9021..>9809)
                     /locus_tag="VEV83_22210"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HYK47915.1"
                     /translation="DPTPFNLPAWVPMSAKEKLNKAIKNIDNIIIGMMNERCSTDKYE
                     GKLLANVMDQKDDDGRAISREDALAEIKNVFISSFFSTSDLLAWLVYSLAQYPCWADK
                     IYYNCKFFEEQPDPRSLENSVDMQFFIHEVLRFYSPAWASSHRTIDALELGDYIIPKH
                     VTVLVSIYNLHRHPAFWDQPKTFNPERFRSFHEQREKAMFVPFGLGPRKCVGMGLATL
                     VINIVCAKIVCNFNLSVNQKVVPAVQSRVSLGSKDDLEVFISPR"
BASE COUNT         2931 a         2027 c         2140 g         2711 t
ORIGIN      
        1 gtgcaggaaa caattttaag accaggatca cttctctttt acccttcgca tatgccttgg
       61 tgggtatttt atacctgggg cttcagctga aaaatttata tccagattat tccattgaaa
      121 atatgcatcg tacaattcaa cagccatggg taacgatctg gggccttctc tcaattcttt
      181 tctggatacc agcacttgcc aaaaagccac tgctcagttt atcacacagt ctcatctttt
      241 tcattctatt gttaaaggac ttattttccc aaatatctgc gcctacgaca gacatggtac
      301 gaaatgatat gaacgtttat acggtcagcc ttctcgtaaa cctcgcagcg attgctttta
      361 tgttgctaca atcttttcta tatacccgtt ttaaaaaccg taagctcgta aagtaatcgg
      421 gactagaact acatatcagg caagttgcca tttgcggaaa ggctcttcat ttcatctgag
      481 tatcggatga caaaaagggc ttcaatcttc tctctcgcaa aggaaattgt atgaattata
      541 taattctttg caataattgt ataacattta aaatacgcct gtcgccgagc tttacactat
      601 aaagatttga tcgttacttg tagcttttac ctggctggca ctgctctatt attatcagga
      661 atgtttaata aaaatcactc aatattcgca tgaaattatt caagtttagc tgcgggagcc
      721 tatagcggtc aaccatgtac aaactccgca gaaatgaaaa aggacgggct acgcttaaga
      781 acaaacttct ctttaccccg ttattcttta cgccttctat aagggattat gattcgaatc
      841 agataacagg ttgatgatga tcaggaattt ttattttgtc caattctatt ttgcaaccat
      901 caaaaaacaa atctcaatct gctcaaaaaa ttaattcact aaaaaaataa tgttatgaaa
      961 cttattagca ataaaacgtt gatggttctg ctgatcctcg cgagtgggta cggttacatt
     1021 gccagctgta cacatgatga tattgttccg cctgcacaag ccacccaaac accgataata
     1081 acacgcggta atgtggttct tcttcctggc gacatgacgc cgggcgacac aacggagtgg
     1141 aaactcgaca aagttcactc gagtgttttg tggtcaactg cgtatgttgg cgctgcgggc
     1201 ttacttaccg gtcgttttaa ccagtttggc atgcaccagg tgaccgaacc tgaaatgctg
     1261 cagtatacaa ttacaggcca accattaaaa gatacttcat gggcatttta cgaaaatgat
     1321 ccatccaaaa catatattaa cggatatgtg cagatcaata cgtctaacac cggtgaaccg
     1381 ggccgcgatg ccgggtgcaa tgtgtcaggt ctgagcacca ttccaataat aaccggagtt
     1441 caaaatctgc aaccagtaaa ccttgcaaag atcaaatcaa ccaaggtcga atttgatccg
     1501 ttaagcaatg attacatagt caccctcgat ctaacatggc attctcataa tgatactctg
     1561 gcaaatagtt ctccggacta tacgtatgat cccaacctgc ctgcaagcag catgatcact
     1621 aaatcaattg ttggaaggct gaaatatatt ccgaaagcga cagttgtacc aaccaccgga
     1681 actccgtata gtgtttttgg tctacaactt acgttccaat tcaattgccg cgattttcaa
     1741 atatcaagca caagtatcgc tgatgtgata gacattgaat gtaacatgaa cttcaacaat
     1801 aagtaacctc taaaagaagt acaatgaaaa agttaatcat aattgcaggg cttattgtta
     1861 ttgccggaat aacaataacc ggatgctaca cagatgtgat catgccgcaa gcgcctaccg
     1921 atcctaatgg accaccgcag gcagtgagtt acaaaaatga tctgtcccca atgttcgcaa
     1981 caaaatgcgc tttggccggt tgccacgttt cgggcggcca ccatccatac atgacgccgg
     2041 atgtttctta ctaccaaatt gtaaatggag gttatgtgaa tactgaaatt ccggatcaaa
     2101 gcatattaat gataatgctt agaggcgaaa tgggtcagta catgccgtct tcatcagacc
     2161 agcaaaaagt ttacgactgg ataagaaatg gtgcaccaaa caattaatga cctcaaaaag
     2221 caaaaaacat gaaactaaaa atatatcgac cggtttgccg ctttaccatt aagcttagtt
     2281 tggtaagtgt actgttccta tcattcgtaa cgcttaatgc gcaggacagc agtgctgtaa
     2341 atgaaccgcc tgcagcgcct gcaaaagtta aaccggtaaa aaatactttc cagagtattt
     2401 ggatcatcga taatcaaacc gtaatggttc ctataaaagg cacacttgaa ttcgatttcc
     2461 agcataggat gggtgttatt gattgggatg accacccgtc ccgcgatctg tttggacttt
     2521 atggctcggc taatatcagg ctgggcgtaa attatactcc taaagagaag ctgagtgttg
     2581 gaatcggcat tactaagacc aagatgctgc tcgacttaaa tgccaaatat gcgattataa
     2641 aacaaacgaa tggacagtat ccggttagtg taacatggta cggtaatgcg gcagtagata
     2701 cgaggccgaa ggaggacgtt accctttata atggcgaacc tatcaagcat aattcggacc
     2761 gctatactta tttcaacgaa ataatcattg cgaggaaaat aaatgataag ttgtcgatac
     2821 aggtttcgcc gagttggtct catcaaaacg cagtgtgggg ttattataca tcgtacgata
     2881 ctgcaacaaa gttatacggc gacaagtata agagtatgaa ccatgagcat tttgcagtgg
     2941 ctgtatcagg caggtacaaa ttctcaaacc tgtgctcaat acttttcaat tacgatcaac
     3001 cattgaccga gcacaaccag tacaatccca atccgaattt gtcactgggc ctcgaagtga
     3061 ataccagcag tcactcgttc caggtatttt ttaccaacta caaattgctg aacccgcaac
     3121 agaacaatat gtacaatcaa aacaatcctt tcgacagtta taccgatgca aatggaaagg
     3181 agcatgggaa gtaccagtac ctgatcggct ttaatattac aagactgtgg aattattaat
     3241 taacgtgata gcataagttg aataacataa aaaacctggg ttgcatttaa attcaggttt
     3301 tttgttccct caaggtgagc atcgattatc agaaatgcag aagaaaatga caacgctcaa
     3361 tcatcaatta attgctatcg cttttttgcc ggtcttgctt ttgggtattg cttcctgcaa
     3421 agacaataaa ccggcggcga aaagaataac taacgatgct gattccggca gcgaaaagat
     3481 aaaggcagtt tttcataaac cacggagcag tttccaggac acaatgaaaa ttcaggggga
     3541 agcggcggtg ttttacgcgc cggatgagca acagttagaa aaaataaaac gacaaaccaa
     3601 taatcccggc gcgttcggtg cctcaaacag cgagtatgta cacatgatgg agaatgcgcg
     3661 taaggtgatc aggaatacgt ggccgggttt gcagatcgtg gacgcaaaga attacaggta
     3721 tatccttttt ataaaaaaag atggcggtaa agaatgtatc gacctggata aatatgacga
     3781 tatggatggt ctcttcgttt ttgatgggaa aaaatctgca atgctcattg atgcgatgaa
     3841 tgtggaaacc gaggtgggat cttatttgaa tccttaaaat tatttcaaga aaaaacctga
     3901 tgaaaatcat ataaaccaaa gcccggcgtc aacaagtgat gcgcatgtat catgtaattt
     3961 gctcgtgacg ctttaaaaag ttcaaattat tattaacaaa aaaactgatc aaatgaaaag
     4021 gaagcttatt gcaaccgtca caatcatgtt cgccggctta ttcacatatg ttatgatttc
     4081 cggcttcagg cctgcgcaga acaaaccgtg ggcagtacct gataattata aaagcatgaa
     4141 aaaccctgtt gcctccaatg cagaatcgat cgcagaagga aaagaattat atgccactca
     4201 ttgcaagtca tgccacggta gcaagggtct cggcgatggc tccaaagccg cccagttaaa
     4261 aacggagcca ggtgattttg ccaaagctga cttccaggcc cagagtgatg gagcgctttt
     4321 ttataaaaca tctgaaggcc gtgatgacat gccaagcttc aagaagaaaa tacccgatgc
     4381 tgatgaaaga tggagcctcg tgaattattt aagaacgctt aaaaaataat tgttctttaa
     4441 aggcttcctc acttagcata gttattctgt gctgataagt ccctcggata ttttgcatat
     4501 aaaataattt gtttaaacat ttttatggaa caacccaaaa aaacgtccac gcgcaaacag
     4561 ttcctgctat ggagcgccac cgttctttca tctttaacgt tattgaaatt tacgccgggg
     4621 aataaaagaa aaaagaccga cacggtaaaa atgctgacgc aggatggaaa attagttgag
     4681 gtggatatag aaaaactttc cggcagcaaa ggatcaaaaa tcaccgacga tcagttgaaa
     4741 aactgggtaa acaaaacgca ggagcaaacg aagcttcttt aaaattatat tatggaaaat
     4801 gacaacagat cacgaagaca attcctcacc gccggtgtag ttgctgctgt tgccgcaggt
     4861 tgttcttcca aaaaaaatcc atttgctggt tacgcagctg acgatgcaaa agcatcaggt
     4921 gaaaaggtga agttgttatc ggtggatgga gagatcatcg aaattgacaa agcctttctg
     4981 aaacctgtgc ctgatcttcc gcctgtatca aacaaggaag agagaagagg aattgcaggt
     5041 aagaaatttg tgatggtcat cgatctttcc cggtgtaaga atgtaggagc ttgtaaaaag
     5101 gcttgtaacc atgcgcatga gttaactcca ggcgagaact ggataaaggt gctcgccatg
     5161 caggatgcgg aacacacagc tccttactgg cagcccacga cgtgcatgca ttgcgatgag
     5221 cctccttgtg taaaggtttg tcctgttgat gcaacgttca agcgccagga tggaattgtt
     5281 ttgatcgaca gtgatcgctg cataggttgc cgtttttgta tggctgcttg tccttacaca
     5341 acccgtgtat ttaactgggg agagccggat cttccgaaag aagtcgcaga aaaaccttac
     5401 tcctgcgaaa ctagtttgcc gcaaaagaaa ggaacagtgg gtaaatgcga tttctgtgcg
     5461 gatatgacaa gaatgggcga attgccacac tgcgtttcgg cgtgtccgaa tggtgttttc
     5521 ttttttggtg atatgaatga agattctgtt acaaacggcg ctgaaacttt tcgcttcagt
     5581 gacctgatcc gggacaaagc agggtataga ttaatggaag accttggtac aaagccccgc
     5641 gtgtattacc tgccgcccgt caaccggaat ttcccttttg aatcaggcga ggaaaatgaa
     5701 agtgatgatg ataaaaagaa ggacgtaaaa taattgacat gaaaaattta actgctctaa
     5761 caggtgaaca aattacacgg gaccttctgc cgcagaaatt tggtaagcgg ggattgatct
     5821 ggacgggcgt actcgtattg atcgctctta tcggcgcctt tgcttattac cgccagttga
     5881 gatatggact cgtggtcaca aacatgcgcg actacgtttc gtggggtatt tatatttcta
     5941 atttcgtgtt ttttgttgcc atcagcctcg ttggctctct tatcaccgct attttacgac
     6001 tggcgaatgt agagtggagc actcctctca caagaattgc agagatcatc gcggtctctg
     6061 ccatcgtatt cgcttctatc attatcatcg tagatatggg gagacctgaa aggtttttga
     6121 acctttttat tcacgggcgc ctgcaatcgc ctatcatgtg ggacgtgatc gtgatcggaa
     6181 cttatttttt catcagcctc ttactactat attttccttt gttgcccgac cttaaaattc
     6241 ttattcaatt caaagaaaaa acaggtaagg cgttaaataa attataccgc ttccagggtt
     6301 cattttggaa aggcacaaag gcgcaattca aaatcagtaa cagggcaatt aatattctgt
     6361 gcgttttaat tatcccggtt gcttttagta ttcacaccgt cacttcctgg ttgtttgcca
     6421 caacgtacag gccagggtgg gacagtacga actttggcgc ctactttata tcaggagctt
     6481 tcctggtagg agcaggcgga gtggtagttg ccatgtatgt attccgcagg tattatcatc
     6541 tcgaaaaata tattaccgaa aagcatttcg aaaaaatggg aagagtggtg gtattgctgg
     6601 ctcttttgta cctgtatttt aatatcaatg aatatttagt tcctgcattt aaaatgaaaa
     6661 aaccggagga agctcatttg acccaattat ttgcgggtca atatgcgctg ctgttttggt
     6721 tttgcatatt agtcggcatg atcttgccca tggccatttt gctttttaga aaaggaagga
     6781 agccacttcc ggcgtttatt gcaggagtaa tggtagttgt gggagcgtgg ttcaaacgct
     6841 acctcatcgt aacgccaact ttacttcatc cttttttacc gatgcgcgac gttcccgaaa
     6901 gttatcatca ctactttcca agttgggaag agtgggcaat tgctatgggt tcgctggcag
     6961 gtgctttact tgtgatcaca ttttttgcaa gaatatatcc gatcattccg attcaggaaa
     7021 ctataacaga acagaatgag agtgaaagaa tattttctat tatccacagt gaagaaagta
     7081 caaccgaaca atatgagaag gaagaacaaa aataagatga tggttgtggc ggtggcttta
     7141 ttgatcgccg gtccattccg tgtttttgcg caagactcga cgaagagcga gttggtgatg
     7201 actgtaagtt atttcatgaa taataacaaa cttgcatacc tgacggtaaa cacgaagaca
     7261 aagatcgaga agaaattcca gccggtacag ggcgtgattg tagaccttta cctcgacagt
     7321 gattcggccg caaacgtcgt tggaaaagta actacgaatg aaaagggatt ggcgaaggcg
     7381 atcatgccgc ctgctttgaa aaatgtttgg gatagcgcgg cttcgcacac gttcatcggc
     7441 gtgtcagaac caacaaaaca gtttgacgca acaagggcgg aggccgcgat gacgaagacc
     7501 aaaattacca ttgacacggc gacagatgct gaaacaaaaa atatcacggt caccgtattg
     7561 gcattgcagg atggtgaatg ggtgccggca aaggatgtgg aaatgaaagt aggtattgcc
     7621 cgctcaggtg gaagcattct ttctgccggc gatgaagaaa cgtatacgac cgattcaacc
     7681 gggactgtaa ctgcagaatt taaaagagac agcctgccgg gggatgagaa ggggaatatt
     7741 atactggcag caaaagtcga agacaatgat cagtatggaa atttgtttgt tgaaaaaacg
     7801 gtgccctggg gcgtagcttt aaaaccggaa acaaatttct ttgatcaaag aacgttatgg
     7861 acaacgcggt tcagaacacc attttggttg ctgttcatgg cttattcaat tgtgatcgct
     7921 gtatggggca cgatgattta tcttgtgtgg caaattgtga agattaagaa gctggggacg
     7981 caggaagggt gagtttagaa aacgttccaa atctcaaatt acaaggctga tcacgtgcga
     8041 gagtagtttt gtatctagtt tgaatttgcg atttatttgg gatttgattt ttgtgatttg
     8101 ctttttgatg cttcatgaaa gaaatcccaa atttcaaaat acaagatcca aaaaaattaa
     8161 aaatctaaaa gataaaactg atcacgtccg tgattattgt tcatccagct ttcttccttg
     8221 cctttcgtat aatgcgctgc gttacagaaa aaaccaaacc gggaaaatta tttttcaaaa
     8281 gtcttacagc gcgactatcg atgtcacaat atatttcaaa cttgttttgt tgtaaacctt
     8341 tgagataaat ttcggccact ttatcgggtg atttctcctt gatgctttta ctcagggccg
     8401 tgctttcagg caaggtgtgc tttcgctcgt accgcaacat aggggtatcc gtgtccggcg
     8461 gatagataac tgacacccgg atgttatcat ccttcgcttc catccttaaa cattctgcaa
     8521 gaccgacgat cgcgaacttt gaaggggcat agctgctgtg cccgatcagg cccatatatc
     8581 ctgccacact gcttacgaaa cttaattgtc cctccgactt tttcaaccat ggccaggcag
     8641 ccttggaaat gtacacagcg ccaagataat ttgtgagcaa acatcgttcg aggtttttga
     8701 ctggctggtc tttgaagcgg ccgcacgtca tgatgccggc gcaattaata accacatcga
     8761 tcttttcaaa ctgttccgcg attttcttaa ttgtagcaat aacagcagca ttgtccgtga
     8821 tatctattga tatcggaaat acacttgcag cgccattttt ttcggcgatg atttttgccg
     8881 cttgaagttt ttcttcatcg cgcgcaatca gtataagacg tgcgtgttgc tgcgcaaatt
     8941 gttttgccaa tgctaagccg ataccggaag agccgccggt taccacaaca actttgtccc
     9001 tatagaaatc gttcttcata ttaacgcggt gaaataaaaa cttcgaggtc atcttttgat
     9061 ccaagcgaaa ctcttgattg aactgccgga actacctttt gatttacgct caaattaaaa
     9121 ttgcaaacaa tttttgcgca gacaatattt atcacgagtg ttgctaatcc catccccaca
     9181 cacttgcgtg gcccaagccc gaacggaacg aacatcgctt tctcacgctg ttcatgaaac
     9241 gacctgaatc tttccgggtt gaatgtcttt ggttggtccc aaaatgcggg atgacggtgg
     9301 agattataaa tacttaccag tactgttaca tgtttgggaa taatgtaatc gcccaattcc
     9361 agcgcgtcga tcgttctgtg agatgatgcc catgcaggcg aatagaaacg cagcacttca
     9421 tgtatgaaga actgcatgtc gacagaattc tccaatgacc gtggatctgg ctgctcttca
     9481 aaaaatttac agttgtaata tatcttatcc gcccagcacg gatattgcgc cagtgaatac
     9541 accaaccacg caagaaggtc agacgttgag aaaaaactgg aaatgaaaac gttctttatt
     9601 tccgcgagcg cgtcttcacg actaatggcg cgtccatcgt catctttctg atccatgacg
     9661 tttgccaaca gttttccctc atacttgtcc gtgctgcagc gttcattcat catgccgatt
     9721 attatattgt cgatgttctt tattgctttg ttcaactttt cttttgctga catcggtacc
     9781 caggcaggca agttgaaagg agttggatc
//
LOCUS       DASQJI010000855         5730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_601300,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000855 DASQJI010000000
VERSION     DASQJI010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5730
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601300"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="VEV83_22215"
     CDS             <1..627
                     /locus_tag="VEV83_22215"
                     /inference="COORDINATES: protein motif:HMM:NF036807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HYK47916.1"
                     /translation="EQLGFGKCYHMIELFIHPEDLVYFEKAERGEAVDWDKLFEGYNS
                     AVDYPVARYYKELIAKYPNAKIIHTVRDPESWYQSAKETIFWASKPSLARMLSLMLKL
                     PFSATLRRRFPILKHNGRMLDQIFGKDLGNKQDIIKKYNEINTETLNFIPKDRSLVYD
                     IKTGWEPLCNFLNVPVPATPFPKSNVRDEFKVRVAAISSGKPVETGGA"
     gene            complement(701..1561)
                     /locus_tag="VEV83_22220"
     CDS             complement(701..1561)
                     /locus_tag="VEV83_22220"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK47917.1"
                     /translation="MPVSRRKFLRTGTLLTAAGLINVDQLFARPKLKDYGIQLWTVKK
                     DLPHDPKGVLKQLAGFGYTQIESFEDKKMGMFWGMSPSEFKSYVDGLGMKAVSSHFDD
                     VYKDSFNQKAADAATAGLKFLILPSEAGSKTIDDYKKLANRFNECGEICKKNGLLFGY
                     HNHDAIFKPIDNQVPMDILLENTDKENVIFEIDLYWAVTAGVDALAYMKKYEGRFKLC
                     HVKDRIKNTNQHDASCILGQGSIDYSKMLPEAKQLGIEYFIVEQERYDNTTPMESAKA
                     DAQYMSKLNV"
     gene            complement(1588..2232)
                     /locus_tag="VEV83_22225"
     CDS             complement(1588..2232)
                     /locus_tag="VEV83_22225"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HYK47918.1"
                     /translation="MDRREALSRVALIMGGTIIGAEAFITGCKPTPKKEGLFSADDIS
                     LLDEIGETILPNTPSSPGAKEAKIGEFMKTIVTDCYDENDQKIFTDGIGKLNEASKKK
                     FDNSFMQLTPDQRTQLLTDMDKEAKDKQKEIGERYAKLSDEEKHKRALEQDAGTYKRD
                     AQDDPHYFSMMKQLTVWGYFTSEPGATKALRYVAVPGRYEGCIPYTKGEKAWAT"
     gene            complement(2337..4043)
                     /locus_tag="VEV83_22230"
     CDS             complement(2337..4043)
                     /locus_tag="VEV83_22230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014220914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK47919.1"
                     /translation="MGDSLNINNKAAAQNTFDAIVVGSGISGGWAAKELTEKGLRVLM
                     LERGRNFEHIKDYKSATQNIWEFPHHGRVTQEELKRHPIIKRTWGTYEPIIDYWANDA
                     EAPYVEIKPFKWWRSYQLGGRSILWGRQSYRWSDLDFEANAKDGWAIDWPIRYKDVEP
                     WYDHVEQFIGVSGSKEGLPQLPDGHFVPPMQLNCVEVDVAARLKEKFNRHMIIGRSAN
                     TTEAREGRTQCQFRNRCWEGCPFGGYFSTQSSTLPAAMKTGKLTVRPWSIVTKVIYDK
                     NTQRAKGVEVLDAENNQTYQYFSKIVFLNASALNSAWVLMNSATDVWPDGLGSSSGEL
                     GHNVMDHHYNVGASGDVEGYEDKYYYGRRPNGFYIVRFANLLDDKRDFLRGFGYQGSA
                     SRQGWSRDVAELSVGGKFKEALTEPGRWTIGMTGFGELLPYHENKISLDKDKKDKWGL
                     PALAMDAEIKENELKMRKAIVEESKAMMEAAGVKNVITWDRGHEIGDGIHEMGTARMG
                     DDPKTSVLNKWNQVWDAPNVFVTDGACMVSSACQNPSLTYMALTARAADYAVQELGKR
                     NL"
     gene            complement(4138..>5730)
                     /locus_tag="VEV83_22235"
     CDS             complement(4138..>5730)
                     /locus_tag="VEV83_22235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HYK47920.1"
                     /translation="LERGRDVKHIKDYPTANLAPWEFRHHGQMTLKAQKENPVASKCY
                     AFDETAAHFFVKDKEHPYIQEKPFDWIRGYQVGGKSLTWGRCTQRWSDFEFTGPQRFG
                     YGWDWPIRYADVAPWYSHVEKFIGVCGNKDGLEAMPDGEFLPPFELNCVEQHLKESIL
                     KNYGNRYLVHARWAHLTQPNQIHLDQGRGQCQARNVCQRGCPFGGYFSSNSSTLPWAA
                     KTGNLTVRPFSVAHSIIYDEQKQKAIGVRVIDSETKKATEFFSKIIFVNGSALNSILV
                     LLNSTSPRFPNGLGNDSGLLGKYVCFQNYRGFMIGHIDGFDDKYYYGRNPTDAIIANY
                     RNLHKQDADFVGGYTTYLSARRERVDGETCPQQIGAAYKESMTEPGSWIVYSYLQGET
                     IPKENNHVRLSADQKDDWGIPLLVTSVDYDDNDEKLLKDFFVQTEEMLSKGGVKNIDH
                     RDSKQAPGLDIHEMGGCRMGTDPQTSMLDKWNALHHCKNVFVTDGACMTSTGNQSPSI
                     LYMTLTARAANHAVDELKKGNL"
BASE COUNT         1424 a         1416 c         1137 g         1753 t
ORIGIN      
        1 gaacaattag ggttcggaaa atgttaccac atgattgaac tctttataca cccggaagac
       61 ctcgtgtatt ttgagaaagc ggaaagagga gaagcagttg attgggataa attgtttgaa
      121 ggatataact ctgccgtcga ttatcccgtc gccagatatt ataaagagct gatcgcaaaa
      181 tatcctaatg caaaaattat tcatacagtg cgtgatccgg aaagctggta ccaaagcgct
      241 aaagaaacaa tattctgggc cagcaaacct tcactcgcaa gaatgttgag cttgatgctc
      301 aagttgccgt tttctgcaac actacgaaga agatttccta tcttaaaaca taacgggagg
      361 atgttggacc agatatttgg aaaagattta ggcaacaagc aggacattat taagaagtat
      421 aacgaaataa atactgaaac gttgaacttt attccaaaag accgatccct tgtatacgat
      481 ataaaaactg gttgggaacc actatgtaat tttttgaacg tgcccgtgcc ggcgacgccg
      541 ttccccaaat caaatgtgcg ggatgaattt aaagttagag tagcggcaat ttcttccggt
      601 aagcctgttg agacaggagg tgcataataa cttttcaact caattgaata cgcaaaaaag
      661 cccgtcttac aaaaccggta tagttattaa acagtgttat ttacacattc agtttgctca
      721 tgtattgtgc gtctgcctta gcactttcca tgggcgtcgt gttgtcgtac cgttcctgct
      781 caacgataaa atattcgatt cccagttgct ttgcttccgg caacatcttt gaatagtcga
      841 tcgaaccctg gcctaagatg caggaagcat cgtgctggtt tgtatttttg atcctgtcct
      901 taacatggca caacttaaaa cggccttcgt attttttcat gtaagccagg gcatctacgc
      961 cggcggtaac tgcccaataa agatcaattt caaatatcac gttctctttg tctgtatttt
     1021 ctaacaggat gtccatgggc acctggttat ctattggttt gaagatcgcg tcgtgattgt
     1081 gataaccgaa aagcaatcca ttctttttac agatctcgcc gcattcgttg aatctgtttg
     1141 cgagcttttt gtagtcatcg atggtcttcg atcccgcttc cgatggaagg atcaaaaatt
     1201 tcaggcctgc agtcgcggcg tctgcagctt tttgattgaa gctgtctttg tacacatcgt
     1261 caaagtgact tgacacggcc ttcattccca aaccgtcaac ataactttta aattcggaag
     1321 gactcattcc ccaaaacatt cccattttct tgtcctcaaa actttcaatt tgcgtgtagc
     1381 cgaacccggc tagttgcttg agcacacctt tcggatcgtg tggaagatct tttttcaccg
     1441 tccataattg tatgccgtag tccttcaatt tcggacgcgc gaataactgg tcgacattta
     1501 ttaaccctgc agcggtgagc agtgttcctg tcctcaaaaa tttccttctt gatactggca
     1561 tgatgaaatg tttcagctaa aaaatattta cgtcgcccag gccttttccc cttttgtgta
     1621 aggaatacaa ccttcgtaac ggcctggtac agctacatag cgtaaggctt ttgtagctcc
     1681 tggttcagaa gtgaaataac cccaaacggt aagttgcttc atcatgctga aataatgcgg
     1741 atcgtcctgc gcatcccttt tataagtacc cgcatcctgc tctaaggcgc gtttgtgctt
     1801 ttcttcatcg ctgagctttg catatcgttc gccgatctct ttttgtttgt ccttcgcttc
     1861 tttgtccata tccgtgagca gttgtgttct ttgatcagga gttaactgca taaagctgtt
     1921 gtcgaatttt ttcttgcttg cttcgttcag cttgccaatg ccatcggtaa atattttctg
     1981 atcgttctcg tcgtaacaat cggttacgat cgttttcatg aactcgccga tcttcgcttc
     2041 tttagcgccc ggcgaagagg gagtattcgg caaaatcgtt tcccctattt catcgagcag
     2101 agaaatgtca tcggcgctga acaatccttc ttttttcggc gtgggtttgc atcctgtaat
     2161 gaatgcttct gcgccaatga tggtgccacc catgatcaac gctactcttg ataaggcttc
     2221 tcgtctatcc ataaaatttg atttacagtt tgtaaagttt aatatgatct ctgatgtctg
     2281 atctctgatc tcatttgact agtagatcag agatcagaca tctttagatc agagatttat
     2341 aaattccgtt ttcccagctc ctgcacggca tagtctgctg ctcttgcggt taatgccata
     2401 taagttaaag atggattctg acacgcgctc gacaccatgc atgctccatc tgtaacaaaa
     2461 acatttggtg cgtcccaaac ctggttccat ttattgagca ccgatgtttt tggatcatcg
     2521 cccattctcg ccgtgcccat ttcatggatg ccgtctccga tctcatgacc gcgatcccac
     2581 gttattacgt ttttaacccc ggcagcctcc atcatcgctt tcgattcttc aacgatggcc
     2641 ttccgcatct ttaattcatt ttctttgatc tctgcatcca tagcgagtgc gggcaaaccc
     2701 catttatctt ttttatcttt atcaagcgag atcttgtttt cgtgataagg aagcaactcg
     2761 ccaaatccgg tcatgcctat tgtccaccga ccgggctccg tcagcgcctc tttaaatttt
     2821 ccaccaacac ttagctctgc aacatcacgg ctccagcctt gtcgactcgc gctgccctgg
     2881 tatccaaagc cgcgtaaaaa atcacgttta tcatccaata agtttgcaaa acgaacaata
     2941 taaaaaccat ttggccttct cccataataa tatttgtctt catatccttc cacgtcgccg
     3001 gaggcgccga cgttgtaatg atgatccatg acgttgtgcc cgagttctcc gctgctgctt
     3061 cctaatccat cgggccatac atccgttgca gaattcatca gcacccatgc gctgttgagg
     3121 gcggaggcgt ttaagaaaac tatttttgaa aaatactggt acgtttgatt gttctctgca
     3181 tctagcacct cgacgccttt cgctcgttgt gtgttcttgt cgtaaataac ctttgtaacg
     3241 atgctccatg gccgcaccgt tagcttaccc gttttcatcg cagcaggcaa agtagatgac
     3301 tgtgtactga aatatccacc aaacgggcaa ccttcccagc aacgatttct aaactggcat
     3361 tgcgttcttc cttccctcgc ctcagtagta ttagcgcttc ggccgatgat catgtgcctg
     3421 ttgaattttt cttttagcct ggctgccaca tccacttcaa cgcaattcaa ctgcattggc
     3481 ggtacaaaat gaccatccgg taattgcggc aatccttctt tcgaaccact cacgccgata
     3541 aattgctcaa catgatcata ccatggctca acatctttat aacggatcgg ccagtcgatc
     3601 gcccatccat cttttgcatt tgcttcgaaa tccagatcgc tccagcgata gctttgcctt
     3661 ccccacaata tcgagcgtcc gcctaattgg taagacctcc accatttgaa cggctttatt
     3721 tcaacataag gcgcttccgc gtcattcgcc caataatcga tgataggttc ataagttccc
     3781 catgtgcgtt taatgatcgg gtgccgtttc aattcttcct gcgttacccg tccgtgatgc
     3841 ggaaactccc atatattttg cgtcgccgat ttataatctt taatgtgctc aaaatttctt
     3901 ccacgttcaa gcatcaaaac cctcagtcct ttttctgtca actcctttgc tgcccaaccg
     3961 ccactaatgc ccgatccaac aacgatcgca tcaaaagtgt tttgcgctgc tgccttgtta
     4021 ttgatattta aagaatctcc catggttaat ttgaaaataa atcatttgaa aatttgaaaa
     4081 tgtttgaatg agaaagctaa ttttcgaatt agcacacttt caaatttcca aattgtatta
     4141 caagtttcct ttcttcaact catccaccgc atgattcgcc gcacgggccg ttaacgtcat
     4201 gtacaaaata ctcggacttt gattgcccgt gctcgtcatg caagcaccgt ctgttacaaa
     4261 aacatttttg cagtgatgta aggcgttcca tttgtcaagc atcgacgttt gtgggtcggt
     4321 tcccatgcgg catccgccca tctcatgtat gtcaagaccc ggtgcctgtt tgctgtcgcg
     4381 atgatcgata ttttttacgc ccccttttga aagcatttct tcagtctgaa caaaaaaatc
     4441 ctttaaaagt ttttcatcgt tgtcgtcata atcaaccgac gtcacgagca acggaattcc
     4501 ccaatcatct ttttgatctg cgctaaggcg gacatgattg ttttccttgg gaattgtttc
     4561 gccctgtaaa taggaataca cgatccagga gccgggctct gtcatcgatt ccttatatgc
     4621 ggcgccaatt tgctgtggac atgtttcgcc atcaactctt tctcgacgtg cgcttaaata
     4681 cgttgtatag ccacccacaa aatccgcatc ctgcttatgt aaattgcgat agttcgctat
     4741 gatggcgtca gttgggttgc gcccataata atatttgtcg tcaaagccat caatgtgacc
     4801 aatcataaaa ccgcggtaat tctgaaagca gacatatttg ccgagaagcc cgctgtcgtt
     4861 ccccaggcca ttcggaaaac gaggcgacgt agaattaagc agcacaagaa tgctgttcaa
     4921 ggcagagcca ttcacaaaaa ttatttttga aaaaaactcg gtagcttttt ttgtttcgga
     4981 atctatcact cttacaccaa tggccttttg tttttgctca tcgtaaataa ttgagtgtgc
     5041 cactgagaac ggccgcaccg ttaggttccc tgtcttggca gcccatggca atgttgatga
     5101 attggagctg aaatatccgc cgaacgggca tccccgctgg catacattcc ttgcctggca
     5161 ttgtcctctt ccctggtcaa gatgaatttg atttggttgc gtcaaatggg cccaccttgc
     5221 atgcaccaaa tagcgattgc cgtaattttt taagatgctt tctttcaaat gttgctctac
     5281 gcaattcaat tcaaatggcg gcagaaactc gccgtcgggc attgcttcca aaccatcttt
     5341 gttcccgcaa acgccgataa atttttctac gtgcgagtac catggcgcta catccgcata
     5401 acgaatcggc caatcccatc catatccgaa acgttgagga ccggtgaatt cgaaatcgct
     5461 ccatcgttgt gtgcatctgc cccaagttaa agatttccct cctacctggt aaccccggat
     5521 ccagtcaaaa ggtttttcct gtatgtacgg atgctctttg tcttttacaa aaaaatgcgc
     5581 agcggtttca tcaaaagcgt agcattttga tgcaacagga ttttcctttt gggcttttaa
     5641 agtcatttgt ccgtgatgcc tgaattccca cggtgccaag ttcgccgttg gataatcttt
     5701 tatgtgcttc acatctctgc cgcgttccag
//
LOCUS       DASQJI010000856         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_450390,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000856 DASQJI010000000
VERSION     DASQJI010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450390"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="VEV83_22240"
     CDS             complement(<1..855)
                     /locus_tag="VEV83_22240"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HYK47921.1"
                     /translation="MRSYINFTRLILLFVFLVILAGSIVRTTQSGMGCPDWPHCFGMW
                     IPPLNEKQLPANYRDYLNKQDIDQVYKPAHAWTEYINRLITGVLGILILVHVVWSFKK
                     FFRIKPMVFWLSCLFLVATVFEAWLGKLVVETNLQVVKITAHMLAALFLAIIPLLILR
                     KLNSPIIVHDKGLRILTSIALIVLLLQIMIGTDVREQVDIVSKSLGYQQRETWLIQLN
                     QIFSLHKIVAVITSVLVIVVFWRSLSYASLQRKGAFLLVIVLALMAAGVSLAALNMPA
                     FIQPIHLLL"
     gene            1014..2321
                     /locus_tag="VEV83_22245"
     CDS             1014..2321
                     /locus_tag="VEV83_22245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47922.1"
                     /translation="MKRRHFIQSTSTYMAGAALLPKTLSAKKKIAAGDKINVGAIGIN
                     GMGWSDLQAMIKNPQAQCIALCDVDKNVLDKRVGELAKRNITVTSYSDYRKLLDNKEI
                     DAVIIGTPDHWHCKIMVDACEAGKHVYCEKPVGNSIAECEVMVAAQKKYNRVVQVGQW
                     QHSNQHYRDAMEFAHSGKLGNVRLVKAWAYQGWMKPVPVQPDSDPPPGVDYDMWLGPA
                     QKRPFNPNRFHFNFRWYWDYAGGLMTDWGVHMIDYALLGANAMIPKTIMASGGKFAYP
                     DDAEETPDTLTTVFEFNGFNIQWEHATGINDGPYQRDHGVALIGNNGTLIVDRGGWEV
                     IPEVINGNKKMDEVKRQRAVDNGLDLHTKNFLEVIQSQKVEDLHCPVHVAAHVATVCQ
                     MGNIAFRTGRKVYWDEEKRKFTDDDANKLLAAQYHNGYSMPKV"
     gene            complement(2329..>2519)
                     /locus_tag="VEV83_22250"
     CDS             complement(2329..>2519)
                     /locus_tag="VEV83_22250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47923.1"
                     /translation="TGDSCKEFFIHVVFIVLFFQGFDISASQILNTSHSFPPFIGARR
                     SNCTRVRRNEAARRSCRR"
BASE COUNT          762 a          559 c          607 g          591 t
ORIGIN      
        1 gagcaataag tgtatcggtt gaataaacgc cggcatgttt aaagccgcca acgaaacacc
       61 cgcggccatc aacgcaagaa caatcaccag caggaaggcg ccctttcttt gcaggcttgc
      121 atacgaaagc gaacgccaaa aaacaactat caccaaaacc gatgtgatca ccgcaacgat
      181 cttatgcaac gaaaaaattt gattcaattg aatgagccac gtttctcgtt gctgatagcc
      241 caggctcttc gatacaatat ctacttgttc ccgcacatcc gtcccgatca tgatctgcaa
      301 cagtaaaacg atcaacgcta ttgaagtaag aatgcgcaac cccttatcat gaacgatgat
      361 cggactgttg agcttacgaa ggatcagcag cggtatgatg gcaagaaaaa gagccgcgag
      421 catatgggca gttattttca ccacctggag gttcgtctcc acaaccagct tgccaagcca
      481 cgcctcaaag accgttgcca ccaggaagag gcacgatagc caaaatacca tcggttttat
      541 tctgaaaaat tttttaaagc tccaaaccac gtggacaaga attaaaatac caagcacgcc
      601 ggtaattaac cggttgatgt attcggtcca ggcatgagcg ggcttgtaca cttgatcgat
      661 atcctgtttg tttaaataat cccgataatt cgcgggcagt tgtttttcgt tcaaaggggg
      721 tatccacata ccgaaacaat gcggccagtc ggggcaaccc ataccacttt gggtagtacg
      781 cacgatactc cctgcaagaa ttactaaaaa cacaaacagc aatatcagcc gcgtgaagtt
      841 tatgtatgat ctcattgaaa ctttaagccg tgcaaaacta atggcgttta tcacatggac
      901 aagattttta ctgttttgcg ttgcggcgat taaaaaggcc tcaaaaattc gaatggcaaa
      961 ttttaatttt cactccgtac ttttagtttt aatttttaca gcaaataacc aatatgaagc
     1021 gtcgtcattt tattcaatca acgtccacgt atatggcagg cgcggcgttg ctcccaaaaa
     1081 cattatcagc gaaaaaaaag atagctgcgg gcgacaagat caacgttggc gccatcggca
     1141 tcaatggaat gggctggagt gacctgcaag ctatgatcaa aaatccgcag gcacaatgca
     1201 tcgctttatg tgatgtagac aaaaatgtgc ttgacaaacg tgttggtgag ctcgccaaac
     1261 gaaacatcac ggtaacgtcg tacagcgatt acagaaaact cctcgacaac aaagagatcg
     1321 atgcggtgat catcggcacg cctgatcact ggcattgtaa aataatggtg gatgcgtgtg
     1381 aggctggcaa gcacgtgtat tgcgagaagc ccgttggcaa ttcaattgct gaatgtgaag
     1441 tgatggttgc tgctcaaaaa aaatataacc gggtggtgca agtgggccag tggcaacata
     1501 gcaatcaaca ttatcgtgat gcaatggagt ttgctcattc cggaaaactc ggcaatgtgc
     1561 gccttgtaaa agcctgggct taccagggat ggatgaaacc ggttcctgtg caacccgata
     1621 gtgatccgcc gccgggcgtc gactacgaca tgtggttggg ccctgcgcaa aaaaggcctt
     1681 tcaatccaaa tcggttccat ttcaattttc ggtggtactg ggattacgcg ggcgggctca
     1741 tgacagactg gggcgtgcac atgatcgatt atgctttgct tggtgccaat gcgatgatcc
     1801 cgaaaacgat catggcaagt ggtggaaaat ttgcatatcc ggatgatgcc gaggaaacgc
     1861 cggacacgct cacaacagtt tttgaattta atggcttcaa catacaatgg gaacacgcga
     1921 ccggcatcaa tgacggaccg tatcaacgag atcatggcgt tgcgctgata ggcaataatg
     1981 gaacgctcat tgttgatcgc ggcggatggg aagttattcc tgaggtgatc aatggcaata
     2041 aaaaaatgga tgaagtaaaa cgccagcgcg cagttgacaa tggtctcgat ctgcatacga
     2101 agaatttcct ggaggtgata caatcacaaa aagtggaaga cctgcattgc ccggtgcacg
     2161 ttgctgcgca tgttgcaacg gtttgccaga tgggtaatat tgcattcaga acgggaagaa
     2221 aagtttactg ggacgaggag aaaagaaaat ttacagatga tgacgcgaat aaacttttag
     2281 cggcacagta tcataacgga tactcgatgc caaaagtgta gcattatgtt accggcggca
     2341 ggaccttcgg gcggcctcgt tgcgtcgcac tcttgtacaa ttggaacgcc tggcaccaat
     2401 gaacggcgga aaagaatgac tcgtgttcag gatttgagat gcggatatat caaatccctg
     2461 gaagaataat acaataaaaa cgacatgaat aaaaaactct ttgcaactat cacctgtgt
//
LOCUS       DASQJI010000857         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1987461,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000857 DASQJI010000000
VERSION     DASQJI010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987461"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1861)
                     /locus_tag="VEV83_22255"
     CDS             complement(<1..1861)
                     /locus_tag="VEV83_22255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47924.1"
                     /translation="MHSKTNYLLFSFLIFSYACLSQVGKADTSAFRTVVGGPEYEKSK
                     FYQWLWGPNRRAEWTTPVRARVLWLNNEKGGLTPYKTGGGNESKTLRLQTSSGKQYTL
                     RSINKSRADVVLPAYKNTFIEDIINDGVSMSHPYAAMAVTIMEQYAGIYHTDPEIVYL
                     PHQPALDTFDHKFGNDLYILEERLDGDWSDAAHLGNLKNFTSTDDVIDSLLEKNTFKA
                     DQVAFAKARLFDMLIADWDRHEDNWQWGLVDTSATLTYKAVPRDRDQAFYTHNGVLID
                     RLLPASGLGFMQNFDYKVGDMKTLNTEERNLDRFFTNQLSLDDWLAVARSLQQALTDS
                     VIELSIRQLPPEIFAISGPELVAKMRSRRDQLTTFTTAYYLFLAQEVEITGSKGVEDF
                     DVKAMNGNDLSVTVLRLNKDRKRTDTIYARTFKPSETKEIRIYGIAGEDKYVIDNPGK
                     AIGLRIIGGTDKDSILQVARGSKVNVYDDDDNFFRVASARLHLSRDTTIHKFKYAAYE
                     YDKRGFAPSVFYNLEDRLYVGLGYGFTNYKWRKEPFATRQFVDLHYSISQTAFSASYG
                     GLFPRLIGGWDLALSAYYDAERWTNFFGLGNETVVTTRNKEYNRTRSEQWFGSV"
     gene            2030..>2655
                     /locus_tag="VEV83_22260"
     CDS             2030..>2655
                     /locus_tag="VEV83_22260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47925.1"
                     /translation="MKRCICWLIFFFHTATLIHAQCKTYKLDSKHDTLNCTDFKDLKQ
                     GKWFVRVENNHGEPGYQEQGVYKDGKKQGPWTTYNLMGDVIAEENYKWGFKDGVCRYY
                     NLLGLLREESWRAIDPANPYDTVRVYDLNNPDRYDLKIIKVESSSVKHGTWNYYDPER
                     QTITKTEEYVIDQLVTNKKKTPLQLYTDSLATAQQKPTDSLSTSSKNKP"
BASE COUNT          719 a          606 c          591 g          739 t
ORIGIN      
        1 caacacttcc gaaccattgt tcgcttctcg tcctgttgta ttctttattt cttgttgtaa
       61 caacggtctc gttgccaagg ccgaaaaaat ttgtccatcg ttccgcatca tagtaggctg
      121 acaaagcaag atcccaaccg ccgattaacc ggggaaacaa gccgccatag cttgcactaa
      181 aagcagtttg ggaaatggag taatgcaggt caacaaattg tctggttgca aacggttctt
      241 ttctccattt gtaattagtg aagccatatc ctaagcctac atataaacga tcttccaggt
      301 tgtaaaacac agacggcgca aaacctcgtt tatcatattc gtaagccgcg tatttaaatt
      361 tgtgaattgt ggtgtcacgt gaaagatgca gtcgtgcgga tgctacgcgg aaaaaattat
      421 cgtcgtcatc gtatacatta accttacttc cgcgcgcaac ttgtagtatc gaatctttgt
      481 cagtgccgcc gataattcgg agtccaattg ccttgcccgg gttatcgatc acatatttat
      541 cttctccggc aataccatag atccggatct cttttgtctc cgaaggttta aacgttcgcg
      601 cataaatcgt gtcagttcgc ttcctgtctt tgttcagtcg caaaacagta accgaaagat
      661 cgttcccatt catggctttc acgtcaaaat cctctacgcc tttactgccg gtaatttcta
      721 cctcttgcgc cagaaacaaa taatacgctg tcgtgaaagt tgtcagctga tcgcggcgcg
      781 atctcatttt tgcaacgagt tccggccccg atatagcaaa tatttccgga ggtaattggc
      841 gtatcgaaag ttcaatcacc gaatcagtaa gtgcctgctg caatgatctt gcgacagcga
      901 gccagtcatc gaggctaagc tggtttgtga agaatctgtc caggtttctt tcttctgtgt
      961 ttaaggtttt catgtcacca accttataat cgaagttttg catgaagcca agaccggatg
     1021 ccggtagcag gcggtcaata agcacgccgt tgtgtgtata aaaagcctgg tcgcgatcgc
     1081 gtggaactgc cttataggtt aatgtagcag atgtatccac aagtccccat tgccagttat
     1141 cttcatgccg gtcccagtcg gctatcagca tatcaaacaa ccttgctttt gcaaaagcta
     1201 cctggtctgc cttaaacgta tttttttcaa gcagactgtc gatcacgtca tcggtgctgg
     1261 taaaattttt caagtttccg aggtgtgcgg cgtcgctcca gtcaccatcg agcctttctt
     1321 ccaggatgta aagatcgttg ccaaatttgt gatcgaaggt atccagcgcc ggctggtgtg
     1381 gcagataaac gatctccgga tctgtatgat aaattcctgc gtactgttcc atgatggtta
     1441 ccgccatagc agcgtaagga tgcgacatgg ataccccgtc gttgattata tcttcgataa
     1501 aagtattctt gtaagcaggc agcaccacat cggccctgga tttattgatt gaacgaagtg
     1561 tgtattgttt tccgctgctc gtttgaagac gtagcgtttt tgattcatta ccgccgcccg
     1621 ttttgtatgg cgttaagccg cctttttcgt tattaagcca caatacacga gcccggacag
     1681 gcgtggtcca ttccgcgcga cggtttgggc cccatagcca ttggtaaaat ttcgattttt
     1741 cgtattcagg tccaccgaca acagttctaa atgcggaagt gtccgcctta ccgacttgcg
     1801 ataagcaggc ataactgaat atgagaaacg aaaagagtaa ataattggtt ttggaatgca
     1861 tttgaaggca gcaagattgc aaagctaatg ccagacgaca gtcgtaccgc ggcacaacgc
     1921 cgatttgatt aacacgatga tataatcgtg cggtcggcct tattttattt tttgtaactt
     1981 gtaacactga ccttgtataa gaaaaaccgt tttaaatcgt tcttagatca tgaagcgctg
     2041 catttgttgg ttgatatttt ttttccacac cgcgaccctg atccacgcac aatgtaagac
     2101 ctacaaactg gattcgaagc atgatactct caattgcacc gattttaaag acctgaaaca
     2161 aggcaaatgg tttgtgcggg ttgaaaacaa tcatggcgag cctggttacc aggaacaagg
     2221 cgtgtataaa gatggtaaga aacagggacc atggacgaca tataatttga tgggtgatgt
     2281 gatagcggag gaaaattata aatggggttt caaggacgga gtctgccgct attacaattt
     2341 gttgggactg ctgcgcgaag aaagctggag agcaattgat cccgcaaatc catatgatac
     2401 cgtgcgggtt tacgatctca acaatcccga caggtatgac ctcaaaatca tcaaggttga
     2461 atcgtcatct gttaagcatg gcacatggaa ctattatgat cccgagcggc aaacgatcac
     2521 aaaaaccgaa gagtacgtta ttgatcaact ggtaaccaac aaaaagaaaa cgccgttgca
     2581 gttatatacc gattcattgg ctactgccca gcaaaaacca acggattcac tttccacttc
     2641 cagcaagaat aagcc
//
LOCUS       DASQJI010000858         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1987525,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000858 DASQJI010000000
VERSION     DASQJI010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987525"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VEV83_22265"
     CDS             <1..511
                     /locus_tag="VEV83_22265"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018630757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HYK47926.1"
                     /translation="NCSNNYGPNQFPEKLIPLFINNIIQKKPLPVYGKGQNTRDWLYV
                     IDHARAIDVIFHKGRNKEKYNIGGFNEWKNIDLVKLLCKLADEKLDRIAGESEKLITY
                     VKDRPGHDLRYAIDANKINKEFGWKPSVTFEEGLSATIDWYLENQEWLKHVTSGEYQN
                     YYIEQYSNR"
     gene            511..1062
                     /gene="rfbC"
                     /locus_tag="VEV83_22270"
     CDS             511..1062
                     /gene="rfbC"
                     /locus_tag="VEV83_22270"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008581998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HYK47927.1"
                     /translation="MKIERTPLQDCYIIHDTVIADSRGYFFESFNAKKFFELTGLEIF
                     FVQDNQSSSTYGVLRGLHFQTGEYAQAKLVRVLQGRVLDVAVDLRRSSPTFAKAFVLE
                     LSADNHKQLYIPRGFAHGFVVTSSTAVFFYKCDNYYNKSSELGIMYDDPDLKIDWQLP
                     ANDLILSEKDKKNPYLADILHLL"
     gene            1066..>1586
                     /locus_tag="VEV83_22275"
     CDS             1066..>1586
                     /locus_tag="VEV83_22275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016283109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HYK47928.1"
                     /translation="MKGIILAGGSGTRLYPITKGISKQIMPVYDKPMIYYPLSVLMLA
                     GIRDILIITTAEDATQFKRLLADGTDIGCSFSYAIQEKPNGLAQAFVIGENFIGAEKV
                     ALILGDNIFYGSGFSKLVQSFTDVDGAAIFAYEVSDPKRYGVVEFNEEFKALSIEEKP
                     EDPRSSYAVPGLY"
BASE COUNT          475 a          321 c          363 g          427 t
ORIGIN      
        1 aaactgttca aataattatg ggcccaacca atttcccgaa aaattgatcc cgcttttcat
       61 taataacatt attcaaaaga aaccactgcc tgtttacgga aagggccaga atacaaggga
      121 ttggctttat gtgatcgatc atgcaagggc aatcgacgtg atctttcata aggggcgtaa
      181 caaagagaaa tataacatcg gtggcttcaa tgaatggaaa aacattgacc tggtaaaact
      241 gctgtgcaaa ctagccgatg aaaaattaga tcgtattgca ggagaaagcg agaagctcat
      301 tacgtatgtg aaagaccggc cggggcacga cctgcgttat gcgattgacg caaacaagat
      361 caacaaggaa tttggatgga agccctcagt cacatttgaa gaaggcttaa gcgccacgat
      421 tgactggtac ctggaaaacc aggaatggtt gaaacacgta acaagcggag agtatcaaaa
      481 ctattatata gaacaatata gtaatcgcta atgaagatcg agcgtacgcc tttacaggat
      541 tgttatataa ttcatgatac ggtgattgcc gatagccgcg gatatttttt tgaaagtttc
      601 aatgcaaaaa aatttttcga attgaccggg ctcgaaatat ttttcgtcca ggataatcaa
      661 tcttcatcaa cgtatggtgt tttgcgtgga ttgcattttc aaacaggcga atacgcacag
      721 gcaaagctgg tgcgtgtttt acaagggagg gtgctggacg ttgcagtcga cctgcgaaga
      781 tcttctccca catttgccaa agctttcgtc cttgaattga gcgcagacaa ccacaaacaa
      841 ctgtacattc cacgcggctt tgcgcatggg tttgtggtta caagcagcac ggctgttttc
      901 ttttacaagt gcgacaatta ttacaacaag tcatcagagc ttgggatcat gtatgatgat
      961 cctgatctga aaattgactg gcagctaccg gcgaacgatc ttatcttatc agaaaaagat
     1021 aaaaaaaatc cttacctcgc agatatttta catcttttat aaatcatgaa gggcattatt
     1081 ctcgcaggag gttcgggcac gcgcttatat ccaatcacga agggcatcag caaacagatc
     1141 atgccggtgt atgataaacc catgatctat tatcccttgt cggtcctcat gcttgcaggt
     1201 attcgcgaca ttcttattat tactactgcc gaagatgcta cgcaattcaa gcgtcttctt
     1261 gctgacggca ccgacatagg ctgtagtttc tcgtacgcta tccaggaaaa gcccaatgga
     1321 cttgcgcagg catttgtgat cggagagaat tttattggtg cagagaaagt tgcattgata
     1381 cttggtgaca atatttttta tggctccggc ttcagcaagc ttgtgcagtc gttcactgat
     1441 gttgacggtg cagccatatt tgcgtatgaa gtgagcgatc caaaacggta cggtgtcgtg
     1501 gaattcaacg aagaatttaa agcgttgtcc attgaagaaa aacccgaaga cccgagatca
     1561 tcgtatgcag ttccgggcct ttattt
//
LOCUS       DASQJI010000859         5355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1370221,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000859 DASQJI010000000
VERSION     DASQJI010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370221"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1130
                     /locus_tag="VEV83_22280"
     CDS             <1..1130
                     /locus_tag="VEV83_22280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47929.1"
                     /translation="LVMSNGKRVKDTTDWYAVQRPYIYHLFEQNVYGRYPTQPVTVHF
                     KIRESSNNALNGVATRKQVRVYLHPTDTTVFTDVLIYLPNLYKTSAPIFLSLNFNGNE
                     TVNKDPAILPSQKETEINRAHTDSMRGSDRYWQIEDLIARGYGVATAYYGDIEPDNKD
                     GWKTGIRTTLKDVLKIQPEEWSALGAWAWGMSRIMDYIEQDPSIDRNRVVLMGHSRLG
                     KASLWAGASDPRFAIVISNESGEGGAALSKRWFGETIKQINDQFPHWFVAAYKKYNDN
                     ADSLPVDQHMLLALIAPRPLYVASAAGDLWADPKGEFLSAVHAGEVYALFGKKGLGTD
                     TMPAVDQPVGNTIRYHIRSGGHAVTLYDWQQYLAFADMQWK"
     gene            complement(1246..1998)
                     /locus_tag="VEV83_22285"
     CDS             complement(1246..1998)
                     /locus_tag="VEV83_22285"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYK47930.1"
                     /translation="MEKIPDNWYESFFTGINCEMWEKAGTKEWTDAEVAFIIDVLNVP
                     EGSHILDVPCGTGRHSIELAKQGYALTAVDISEEFINGLRRKVEEHHFNIDVIHANIV
                     KHEITGCFDGAICLGNSFGYFQFEDMRAFVKKVASVLKPGAKWIINSGLAAESFLAKF
                     KKDGRYELGDLTMEINNEYDEWNSCLLTTLTYTKNDNQEIHRFKHHVYTIAEIIRLLN
                     SYQLKTSALYSGTNKAEFRLGDPQVYLIAEKY"
     gene            complement(2075..4528)
                     /locus_tag="VEV83_22290"
     CDS             complement(2075..4528)
                     /locus_tag="VEV83_22290"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel family protein"
                     /protein_id="HYK47931.1"
                     /translation="MQPKNVGQKALRLLLLFAACSFITSVCGGQSAIRGKIFNSKKEP
                     AASASVLLLRSKDSSLMKAMVSDVNGTYAFHDIPAGNYLVQGSALGYKQTYSNIVTIN
                     KTNEEATVELTMSEAEAASLTSVTVSTRKPLLEQKIDRLVINVANSITSAGNTALEVL
                     ERSPGVLVSRQNNTIAVNGKDGVVIMINGKINHMPASAVIQMLNGMSANNIEKIELIT
                     TPPANFDAEGNAGYINIVLKQNSSFGTNGSLSGTLGYGQGWVTEAGMTINHRKGNMNW
                     YGDISYSRTKKPFTATAYNEISNNGKITRTDFEADRTDTTRNINGRFGFDWQASKKTI
                     VGVLLSGFDNKYTQSENNVSNISTNAVLDTVIRHANSEMNHWYNYGANINFQHNFNEE
                     DKLVINADYIYYGNNQPVNYHSSYYDNEGKFAHEELFRSGKKTPINFWVFAADYSKKI
                     NKNLSFEAGAKQTVSAFHNNISFERFVQNMWVKDDSLSAEYDLNEDYSAAYASLNVAI
                     NETTQLKGGLRYEHTNSNLGTQDVKNIVDRHYGDFFPSFFISHKLSEKSSIAFSYSRR
                     ITRPTFDDLAPFTYYANANTLLTGNPSLQPALSNNFKADYTLKQYLFSLSYSKEDDAI
                     AQFQPHTDSVTNKVTWSAENMINQKTASLMVAVPVTITKWWNAQLSVTGVWQETNAVY
                     KGEPLSAQQTNVSVNANMRFTLPRNFSAEATGQYQSAQLFGVYRVSPTGTLDIGLKKK
                     LPARWGSLIFNASNILNTSAFTFSTDLPQQNLVGSTSLHFSVPTYKLTYTRNFGNDKL
                     KEKRERMTGAEDEKQRVQH"
BASE COUNT         1437 a         1174 c         1129 g         1615 t
ORIGIN      
        1 cactggtaat gtcaaatggc aaacgggtaa aagacacgac cgattggtac gctgttcagc
       61 gaccatacat ttatcacctg tttgaacaaa atgtgtatgg aagatatcca acacagcctg
      121 ttactgttca ttttaaaata agagaaagta gtaataatgc attaaacgga gtcgcaacac
      181 gtaagcaggt gcgcgtctat cttcatccga ccgatacaac cgtgttcact gatgtgctta
      241 tctatctgcc caatttatat aaaacatcag cgccaatttt tctgagcctg aattttaatg
      301 gcaacgaaac tgtgaataaa gatccggcga tcttgccgtc acaaaaagaa accgagataa
      361 accgcgcaca tacagattcc atgcgcggca gcgatcgtta ttggcagata gaagatctaa
      421 ttgcgcgtgg ctatggtgta gcaacagcat attatggcga catagaacct gataataaag
      481 atggatggaa aacagggatt cggaccactt tgaaagacgt attgaaaatt caaccggaag
      541 aatggagtgc attgggtgca tgggcgtggg gaatgagtcg cataatggat tacatagaac
      601 aagatccttc catcgatcgg aacagggttg tattgatggg tcattcgagg cttggcaaag
      661 caagtttatg ggctggcgct tctgatcccc gttttgccat tgttatttca aacgaatctg
      721 gggaaggcgg agcagctctt tcaaaaagat ggtttggaga aacgataaaa caaatcaatg
      781 atcagtttcc gcattggttc gttgctgctt ataaaaaata taacgacaat gcagattcac
      841 ttccagtcga ccagcatatg ttactggcat taatagcacc gcggccatta tacgttgcaa
      901 gtgcggccgg tgacttgtgg gcagacccaa agggagaatt tttgagtgcg gtgcatgcag
      961 gtgaggtgta cgctttgttt ggaaagaaag gtttgggaac cgatacaatg ccggcggtag
     1021 atcagccggt gggtaatacg atccggtatc atattcgttc gggcgggcac gccgttacat
     1081 tgtacgactg gcaacaatat ttagcgtttg cggacatgca atggaaatga gatcagggta
     1141 aaaatatact gttatgatct gcgtcttcat ttcaaagcac tgactcccct ctattccggc
     1201 gagctgatca cgatttttcg ctgcgatcga gaatggctca ccgaattaat acttttccgc
     1261 tatgaggtaa acctgcggat cacctaaacg aaattctgcc ttgttcgtgc cgctgtacag
     1321 cgcgcttgtt ttcagctggt atgaattcaa caatcgtatg atttcggcaa ttgtataaac
     1381 atgatgtttg aaccgatgga tttcctggtt atcattcttc gtataagtta gcgtagtaag
     1441 taaacaactg ttccattcat catactcatt gtttatttcc attgttaggt cgcccagttc
     1501 ataccttcca tctttcttaa atttagcaag aaaactttcc gccgcaagtc ctgaattaat
     1561 gatccattta gcgcctggct ttaacacact ggcgactttc tttacgaaag cccgcatgtc
     1621 ttcaaactga aaatatccaa agctgttgcc aagacaaatt gctccgtcaa aacaacccgt
     1681 gatctcatgc ttcacaatgt tcgcgtgaat cacgtcaata ttaaaatgat gctcctcaac
     1741 ctttcttctc agtccattta tgaattcttc tgaaatatca acagccgtga gagcgtatcc
     1801 ctgtttcgcg agttcaatag aatgcctgcc tgttccgcag ggcacatcta aaatatggct
     1861 gccctcaggt acattcaata cgtcaatgat gaaagcaact tccgcatcgg tccattcttt
     1921 tgttcctgct ttttcccaca tttcacaatt gatgcctgtg aaaaaacttt cataccagtt
     1981 atccggtatc ttttccatgt tcatccaaac tataattatt caaaaactga cagctcaccg
     2041 catatatttg gagagtcgga tgcattttcg cagctcagtg ttgcaccctt tgcttttcgt
     2101 cttcagcccc ggtcattctt tcgcgcttct ccttcaattt gtcgttgccg aaattacgtg
     2161 tataagtaag tttataagta ggaacactaa aatgcaaact ggtcgacccg acaagatttt
     2221 gttgcggtag gtcggtactg aaagtaaaag cacttgtgtt caggatatta cttgcattga
     2281 atattaacga gccccatctt gcggggagtt ttttcttcag gccgatatcg agagtgcccg
     2341 tcggcgatac acggtatacg ccaaataact gggcagattg atattgacct gttgcttcag
     2401 ccgaaaagtt tcgcggcagt gtaaatcgca tattcgcgtt tacacttacg ttcgtttgtt
     2461 gagcgcttaa tggttctcct ttgtagacag cattggtttc ctgccaaaca ccagtcacac
     2521 tcaactgtgc attccaccac ttcgtaattg taaccggcac tgcaaccatt agagaagctg
     2581 ttttttgatt gatcatgttt tccgccgacc aggtcacctt attggtgacg gaatctgtat
     2641 gaggctgaaa ttgagcaatg gcatcatctt cctttgaata cgacaaagaa aacaggtatt
     2701 gttttagtgt gtaatccgct ttaaaattgt ttgataatgc cggttgtaac gaagggtttc
     2761 ctgttaataa tgtattagca tttgcgtagt aagtaaacgg agccaggtcg tcgaaagttg
     2821 ggcgtgtgat gcggcggctg tatgagaagg cgatcgagct tttttcactg agcttgtgcg
     2881 aaataaaaaa gcttggaaag aaatcaccat agtgccggtc aacaatgttt ttcacgtcct
     2941 gcgtacccag gtttgaattt gtgtgttcat aacgcagccc tcctttaagc tgcgtggtct
     3001 cgttgatggc aacattcagc gaagcatatg ctgcgctgta gtcttcattc aaatcgtatt
     3061 ctgcagacaa tgaatcgtcc ttgacccaca tattctggac aaagcgctca aagcttatgt
     3121 tattgtgaaa agcagacaca gtttgtttag cgccggcttc aaaactgaga ttcttattga
     3181 tctttttaga ataatcagcc gcaaacaccc aaaaatttat gggcgtcttt ttgccactcc
     3241 tgaacagctc ttcgtgcgcg aatttgcctt cattatcata ataagaacta tgatagttta
     3301 caggttgatt gttgccgtaa taaatataat cagcatttat tacgagttta tcctcttcat
     3361 taaaattgtg ctggaagttg atgtttgcgc cgtaattata ccagtgattc atctcgctgt
     3421 tggcatgacg aattaccgtg tccagaacgg cattcgtaga tatgttgctg acattatttt
     3481 ctgactgagt atacttattg tcgaatcctg acaataaaac cccaacgatc gtctttttgc
     3541 ttgcctgcca gtcaaaccca aacctcccgt ttatattgcg tgtagtgtct gttctgtctg
     3601 cttcaaaatc ggttcgcgtg atcttgccgt tgttcgaaat ttcgttgtat gcagtcgctg
     3661 tgaacggctt tttggtcctc gaatatgaaa tgtcgccata ccagttcatg tttcctttcc
     3721 ggtggttgat ggtcataccc gcttcagtca cccagccctg gccatatcct aatgttccgg
     3781 aaagcgaacc attggtgccg aaagagctat tttgtttgag gacaatattt atataacccg
     3841 cattgccttc ggcatcaaag tttgcgggag gcgttgtgat cagctcgatc ttttctatat
     3901 tattcgcgct cattccattc aacatctgta taactgccga agcaggcatg tgattgatct
     3961 ttccattgat cattataaca acaccatcct ttccgttcac agcaattgtg ttgttttgac
     4021 gacttacaag gacaccaggt gatcgttcga gcacttcgag cgctgtgtta cctgccgagg
     4081 tgatactgtt ggcaacattg ataacaagcc gatcgatctt ttgttctaac aatggtttcc
     4141 tcgttgaaac cgttacgctt gtgagcgacg ccgcttctgc ttcggacata gtgagttcaa
     4201 cagtagcttc ttcgttcgtt ttattgatcg ttacaatgtt gctgtaggtt tgtttgtacc
     4261 ccaacgcgct gccttgaacc aaataatttc ctgcaggaat atcatggaag gcgtaggtgc
     4321 cgttaacatc agataccatc gccttcatta aagaagaatc ttttgaccgc aacaataaca
     4381 cagaagcgct tgcagccggt tcttttttcg aattaaaaat tttgccgcga atggcagact
     4441 gaccaccaca gacagatgtg atgaaagaac aagcggcaaa aagtaacagc agccgaagtg
     4501 ccttttgtcc tacatttttt ggttgcatat tgacgaaatt gggtacgtta atttatcttg
     4561 ttagtcgaaa aaaaaatttc aaacgataat cgagacagtt agttattttg tacgaaactc
     4621 cctgctttgt tgcatttctc cattgcgctc atttcgagtt aactactgct caccgatgtt
     4681 tccaccagag agcgcaaata ccaacttgtg atgtcttatt ggctaaatgc cgccgctttc
     4741 gcaatctcac atttggattg cccggcaacc atttgtttat tgggagaatt ctcctgacga
     4801 gtgcttaaaa ttagctaatc tattttcgaa aaccaagttt cttatttcga aaaccaagtt
     4861 tcttacttct ggttcttcga ttttggccga ttgacgacga cagttatcaa gggcgatagg
     4921 ttttttcgat ggttactttg tggtatgaaa atatctgccg gaaaactcca aataacgccg
     4981 ccgtccgcgg catgcgaaat tccaaactgt gaatcgcttt ctcgcctctc tttgtgactg
     5041 aaaagtttga tacagggaca caaagtccac taagaagcac gacgaacaca acggcttaac
     5101 atcacacccg gcaatacttt ttcgtcatgc gaacacgccg caaaatccta aatccgaaat
     5161 cctgaatccg aaatcgtaaa tcccaaattg taaatcgtaa atcctgatca cggtgttatc
     5221 gtctgtatcg ttccatcatc attatacttc agttcggtaa ccttcacgtt tcgcaaatga
     5281 gttttgccgc ttagttgcgt atcgtgataa aacaaatacc actttccgtt gatctcaacg
     5341 attgaatgat gattt
//
LOCUS       DASQJI010000860        16795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_603900,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000860 DASQJI010000000
VERSION     DASQJI010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 16795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16795
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603900"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VEV83_22295"
     CDS             complement(<1..950)
                     /locus_tag="VEV83_22295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 glycosyl transferase"
                     /protein_id="HYK47932.1"
                     /translation="MKHIVFTVTNDLDYDQRMQRICTSLANAGYNVLLVGRKLNTSVP
                     LQQQVFQQKRLRCVFNKKFLFYTEYNLRLFFFLLFTRMDAVCAIDLDTIIPCYFVSRL
                     RNKLRIYDAHELFSEMKEVITRPRIKKMWSGIEKYSVPKFADGYTVSESIAEEFRRRY
                     GVRYSVIRNVPVEKQLAAKQSIENKIFLYQGAINEARGLEALVEVMNYVDAELHLYGD
                     GNIDEQIRKLIRGNRLEKKVIMKGKILPAELYDVTQHAYAGINLVEPAGLNQLYSLSN
                     KFFDYIQAGIPQLTMDFQEYKKINDEYQVAVLTSTINVME"
     gene            complement(976..1341)
                     /locus_tag="VEV83_22300"
     CDS             complement(976..1341)
                     /locus_tag="VEV83_22300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HYK47933.1"
                     /translation="MTKNLRTLLLLVLLVFAASCSRYVTETGTASYYGSQFNNRETAS
                     GSKYNPKRRTAAHKTLPFGTKVIVTNLSNHQRVKVRITDRGPFVKGRIIDLSQKAAQK
                     IDMITQGITQVELRYKKKK"
     gene            complement(1345..1935)
                     /locus_tag="VEV83_22305"
     CDS             complement(1345..1935)
                     /locus_tag="VEV83_22305"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HYK47934.1"
                     /translation="MEAGCDEAGRGCFAGPVVAAAVILPKNFYHPELNDSKQVLPEQR
                     EILRDYIHENALHYAVAMVDNDEIDVINILRASFKAMHLALEQLPVEPALILIDGNRF
                     TSWRNVRHHCIIKGDGIYASIAAASILAKTYRDDFMRKMHEEFPQYNWAQNKGYGTPE
                     HRKAIEEFGLCKYHRKSFNILSAQLELDFDFAEELA"
     gene            2339..6988
                     /locus_tag="VEV83_22310"
     CDS             2339..6988
                     /locus_tag="VEV83_22310"
                     /inference="COORDINATES: protein motif:HMM:NF039936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47935.1"
                     /translation="MRNQLLLAIVLLGVTTAVAAQNADSTTKLYGVRQSWGGIPLTRS
                     QYPEIHGLVGNFKWKDIEPFPNVWNWQQLDSDIASHEAGLPFQLMIFTKDNAPDWLYT
                     TGGVPKVIEYNSTNDSIGISPYYPDPNYKFFFKRMIDTVAKHVKAWPANLKLYLSIQA
                     CLGEELDYIGYRNVDQARATGLDQESIHVDPQYKLSSNQLAVLFKEFTRYYYYAYVGS
                     GIGFLCNPSCADANSQSNIKWVLDSLPGANLRYAVPGKSFQINDEFDRMPWLLPVLNA
                     KYNGAYIRANSDLANNDANVGWFKIHPTRNMFSLFTSMLHYGLELSDQMPTYIKNPAY
                     RPAFDFFNRYAGEKDTATAAHAMCGLHDGLDASDSTRFPSAIYGKAVRSNVLRYMNIQ
                     NAFASKGALLMDTSRVYVKNNGTAGATGTNDVGWRIITGNYERYIHQINPNGTSVGYW
                     NVNALNDTNSIYGRFGRGFDVAHGKNALFFDVDNGFLHYAPLNSQSRVMISVTYLDSG
                     NGSWQLFYDAQDTINKPSIAVNCANTGKWKTTSVTLADGYFGNRNDSMSDFYIRNTGA
                     ENVIFSLVEFERPNVFVNNNGLFCSNALSFDTVCVNTVSRSKFVVVSGAFLNSSDVTV
                     GPFNGYQFSFFADSAFKESLSISNYGTSFQDTIYVRFQPTDSVSYTGNCLITGGGVND
                     GTLSLKGAGINTRPELSATVKNVSCNGAKDGAIDLNLSGGIQPFTYFWTNTGSLKDSN
                     EDIRNLSPSTYTVTVGSYMGCSTASSYVITEPNALTMILTQDSMVCKGGTTSVHVSAS
                     GGTAPYTGVGDFAVSYGKQTFTVVDAHGCIDTASIYVFNGTGVPPAKPAAIICTLADA
                     VGLCGGGKFSYAIDPVPGATSYTWLPPAGCSISSISTDGTQILLSAPLNFTADSLSVT
                     ANNACGSSPALKKSLSALPGKPGAISGPTTVVPLQSGIAFSVTQTGALGYTWTVAPGA
                     TITSGQGTSAITVNWGNTSGNINVRAVNACGSSAGSSMLSITVANYTLVSSVPSLPPY
                     DTICINGLSAYKFFNLAGSGLDGSNVIVKALPGFKVSTTGGGTYTDSLTITNYGTSIK
                     QNIYVKFNPVIPDSYNGNIKIGGGGSSPAYVSVTGVAVNSSPALSANITNISCRGAAN
                     GGIDLSLSGGMAPFAYRWTGPGSYDSSAQDISGLNPSTYTVTVTSYVGCKTSSSYLVT
                     QPDALTMTLTADSVICKDATTIVHVRASGGTAPYVGTGDFNVAPGKQTYTVTDAHGCT
                     QTQSIWIANGSLIAPAKPAPITGAYADSVGLCGGGNFQYRTDLVSTATSYKWIAPSGC
                     SIRSISSDGTQIVLTVPSGFTVDTLRVAASNVCGASVPQAKTLYAVPGRPGPVSGPTS
                     VKSSQTGVVYKTTAVSGLNYTWSVPGSVTIVSGQGSGTLKVNWGTKSGTISVLAKNNC
                     GTSTYGSSLNVSVGTALVPVQQATYASAATNKLIVQPNPAKDIAHISFSATETQNFSI
                     LLTDMNGKLLQSKKGIAVKGENTVSIYIRNYASGIYLVSILTGDGKSTRVKLLKD"
     gene            7221..8321
                     /gene="corA"
                     /locus_tag="VEV83_22315"
     CDS             7221..8321
                     /gene="corA"
                     /locus_tag="VEV83_22315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HYK47936.1"
                     /translation="MIQPNEYLKALVPIFNVKRTKDIFQVNPTIVPLRGEAAEVKVDV
                     YDYNAETVSHHEFTGVQKCERFKDNGKVTWINIDGLRKTDVETICNAFGIHPLLIEDI
                     LSVGQRPKMDELENVLFSLLHMLYFNEETAAVEQEQISILLGQDYVLSFQEEADRDVF
                     NPIREKINTAGSKLRTAGADYLCYSMIDIIVDNYYTVLEQLGEHIETLEENIVRYGNA
                     HSLAHIINLRKELIVLKRTVNPVREVVNGFLRSESDLVADRVTKYFKDVYDHIVQAND
                     LVENYRDIMTSIQDLYLNKVNLRMNEVMKVMAIVTCLMAPATVIGGIFGMNFQSIPYI
                     HNQYGFWIAVSLMVAIPLFMIYVFKRRGWFKN"
     gene            8348..8719
                     /locus_tag="VEV83_22320"
     CDS             8348..8719
                     /locus_tag="VEV83_22320"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 domain-containing protein"
                     /protein_id="HYK47937.1"
                     /translation="MLHVLDFLLTLLHLVIILFNLFGWIFPPTRKANLICIGATAFCW
                     FVLGIWFGWGYCPVTDWQWRVKEQLGETNLPPSFITYYADKVTGRHFSDTFIDSATLI
                     CFALAIFFSLYFNFFKRTKTT"
     gene            8815..9576
                     /locus_tag="VEV83_22325"
     CDS             8815..9576
                     /locus_tag="VEV83_22325"
                     /inference="COORDINATES: protein motif:HMM:NF027464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4846 domain-containing protein"
                     /protein_id="HYK47938.1"
                     /translation="MPIVTALFLCCNGRATECISTSTLAQQFIALDFPRDSWQYFLQH
                     LPLKIAPILDYTGTPVLDQGKHVAIINYDVGNSDLQQCADALMRLRAEYLFAQHRYDE
                     IGFHFCNGEYYAWKMYCDGSRPILNGNKMHWLSAHPCELTHESLRRYLNVVYAYANTI
                     SLAKELTPADKFEVGTVIITAGSPGHACIIIDEVSTSNGGKLYKLAEGYMPAQSIYVL
                     SNTIDRSIDPWYRLQSGVISTSSYQFVHYQLGKFE"
     gene            complement(9647..10897)
                     /locus_tag="VEV83_22330"
     CDS             complement(9647..10897)
                     /locus_tag="VEV83_22330"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HYK47939.1"
                     /translation="MKNKLHFFGLAVLCLSATISRAQTDQVMAKNYADILVWSVGVTN
                     PKHAVDADHTNYAVMQADIGIANSATLKLGWSQLGSAGDNVSVQFQNDNGALSLDVLQ
                     SMTIAVFDSNDQLVGRKQGFDFSDATAVQGTSRYTISIKSRSGALNIAAVRIRISGLL
                     STQNRIRVYYASEGAPCPPIRGGSVNAQHNVTNANNAVSADPNDYAILTPPLALDDSY
                     LDLAFSTTAPGGHLVGFKLGEGNVVLSAQLLQNITLTVYDTDGGVVASQSGFALSDAD
                     VLGGGRFNLTLPTPAGSYQVARGRVRLAGLLNVLTTMNVYDIVAHVPCNTQPVALNNA
                     SQGKIDLHVYPNPFHDYATLNFKGVANNSYRITITDKTGAIVEERIITGSTSTRILEK
                     APVGVYFVKISSGDVTETRKVMKL"
     gene            11297..11917
                     /locus_tag="VEV83_22335"
     CDS             11297..11917
                     /locus_tag="VEV83_22335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HYK47940.1"
                     /translation="MSTTIEAIVFDLGGVLIDWNPRYVYRTIFDSEEKIDWFFDNICT
                     HDWNEKQDAGYSLSTATEELVAQHPEWEPEIRAYYDRWIEMLGGPMHETVNILRDLRQ
                     QEHLSLYALTNWSHETFPVALERFDFLQWFDGILVSGEEKTRKPFPEFYQKLLDRYNI
                     DPARAIFIDDNLRNVRAAEDAGINGIHFLNAKQLREELRKFHVEVK"
     gene            complement(12396..12902)
                     /locus_tag="VEV83_22340"
     CDS             complement(12396..12902)
                     /locus_tag="VEV83_22340"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK47941.1"
                     /translation="MNDVILRPWRREDARQLVNIANNRKIWDNLRDSIPFPYTLKDAE
                     QWIAHCSKQKPVLNFAVLYKSALAGSIGCVPKTDVYRKGMEIGYFIGEQYWNLGIGTA
                     AIHALVNYIEKQFDVVRIYAEVYAHNTASMHVLRKNGFYLEGIRRKNAMKNNLLLDDY
                     VWVKLMER"
     gene            13133..14104
                     /locus_tag="VEV83_22345"
     CDS             13133..14104
                     /locus_tag="VEV83_22345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYK47942.1"
                     /translation="MSNSSRRKFLTEIAGATAFGFLYHACAPHKKATVTPGAKNALAG
                     FFEISLAEWSFHKALFAKKMTNLDFPVVAKQQYNISVVEYVNQFFKDKAKDTNYLSEL
                     LKRCTDNGVRNHLIMCDGEGNLGDPDKAKRMQAVENHYKWVDAAKYLGCLTIRVNAFG
                     QGSAEDVEKASIESLSKLGEYAGQQNINVIVENHGGYTSNGEWMVGVMKGVGRKNVGV
                     LPDFNNFCVKREGGQQWTGKCVEEYDRYKGVSEMMPYAKGASAKTIDFDANGNCVETD
                     YYKMLKIIKDSGFHGYIGIEYEGEKASEEDGVRKTKALLEKVAATMS"
     gene            14302..15510
                     /locus_tag="VEV83_22350"
     CDS             14302..15510
                     /locus_tag="VEV83_22350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018614664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HYK47943.1"
                     /translation="MAEASVAVAQPTYTLKQLVLYFLKLGYSGFGGPVALVGYMHRDL
                     VEKRKWISEEDYKEGLTLAQLAPGPLAAQLGIYLGFVHYRYLGATLVAIAFVLPSFLM
                     VLALGILYKMYNGLPWMQAVFYGVGAAVIGIITMSSYKLTTKSIGKFNAESFRTKWLL
                     WLFYLIAITITFISQTEVLALFLAAGLIYMFYKAPPSWSKKNAVKSSFFLLTGIGFWE
                     YDSKTLGQIAVFFTKAGAFVFGSGLAIIPFLHGAVTDYHWIDEHEFLDAVAVAMITPG
                     PVVITVGFIGYLVAGFPGACVAAACTFLPCYLFTVIPAPYFKKYAKNTSIKAFVDGIT
                     SAVIGALTGAVVIIAINTFTQNHTVAIDIPSVLIAVGTVFALLYIKKIQEPYIILVAA
                     VIGLLLKSFL"
     gene            15545..15856
                     /locus_tag="VEV83_22355"
     CDS             15545..15856
                     /locus_tag="VEV83_22355"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYK47944.1"
                     /translation="MKKPISKQELEALRKTSKVHLLDVRSQQEFEKQHIPVAINVPAD
                     DLPNALQQFSSDDTFVCVCNHGGQRSQKSAEYLHSHGFANAFYLEGGTAGWFDNDHHT
                     D"
     gene            15939..16469
                     /locus_tag="VEV83_22360"
     CDS             15939..16469
                     /locus_tag="VEV83_22360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012788595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'(3')-deoxyribonucleotidase"
                     /protein_id="HYK47945.1"
                     /translation="MRILIDMDDVMADAVARFLEWYERDFGVRYTTAQLHGTKLSEVV
                     PPEHKMIVQNYPHQKGFFRDLPVIQDSKEIIEALNNKYEVFVVSAAMEFKHSLFDKFE
                     WLDQHFPFIHWKRRVFCGEKTIAKGDVLIDDHEFNLSSFAGRPIVFTAPHNVHYTKYE
                     RMDKWLDAKNFFADLP"
     gene            16532..>16795
                     /locus_tag="VEV83_22365"
     CDS             16532..>16795
                     /locus_tag="VEV83_22365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47946.1"
                     /translation="MKRIMALVLLLFAAICLRAQTPKYYRVQIFTDDAGLRELAIKGV
                     GIDHGDYQRGKYFIGEFSQRELELIKQSKYPFKVLISDMSAYYV"
BASE COUNT         4519 a         3694 c         3900 g         4682 t
ORIGIN      
        1 atttccatta cgttaatggt gctcgtcagc acggcaactt gatactcgtc gtttattttt
       61 ttgtattcct gaaagtccat cgttaactgc ggtataccag cttgtatgta atcaaagaat
      121 ttattggaga gtgagtacaa ttgatttaag ccggccggtt cgacaagatt aattcctgca
      181 taagcatgct gtgtaacgtc atataattcg gcggggagga tctttccttt catgatcact
      241 tttttctcaa gccggtttcc gcggatgagc ttcctgatct gctcatcaat atttccgtcg
      301 ccatacaaat gcaattccgc gtcaacataa ttcatcactt caacaagagc ctcaagtcct
      361 ctcgcttcat tgatcgctcc ctggtataaa aatattttgt tttcgatcga ctgcttagcg
      421 gccaactgct tttctaccgg cacgtttctt atcacgctgt accgaacgcc gtaccggcga
      481 cgaaattctt ctgcgatcga ctcactcact gtatatccat cagcgaattt gggcacggaa
      541 tatttttcaa ttcctgacca catctttttt atacgcggcc tcgtgatcac ttctttcatc
      601 tctgaaaata actcgtgcgc atcataaatc cttaatttat tgcggagccg tgaaacaaag
      661 taacagggga ttatcgtgtc gagatcgata gcgcaaactg catccatcct ggtaaacaac
      721 aaaaagaaaa agagccgcag gttatattca gtgtaaaaca agaacttttt attgaacaca
      781 caccgcagcc ttttttgttg aaatacttgc tgctgcaagg gaactgacgt attcaacttt
      841 cttccgacga gcaaaacatt gtatcctgca tttgccaaac ttgtgcagat gcgttgcatg
      901 cgttgatcgt agtccaggtc attggtgacc gtaaagacaa tgtgtttcaa aaaagcatat
      961 tagtaagcag ctaatttatt tcttcttttt gtatcgcagc tccacttgtg tgataccctg
     1021 cgttatcatg tctatcttct gcgcagcttt ttggctgagg tcgatgatgc gtccctttac
     1081 aaatggtccg cggtctgtta ttcgaacttt aacccgttga tggtttgaga gatttgtcac
     1141 aatcactttt gtgccgaaag gaagtgtttt gtgtgcggct gtgcggcgtt ttggattgta
     1201 cttgcttccg ctggcggttt cgcggttatt gaactggctg ccataataag aagcagtgcc
     1261 ggtttcggta acgtatctcg aacaggaagc agcaaacaca aggagcacaa gcagcagcaa
     1321 cgttcggaga tttttcgtca tgaattacgc cagttcctct gcaaagtcga aatcgagttc
     1381 gagttgcgcc gaaaggatat taaaactttt cctgtgatac ttgcacaaac caaattcttc
     1441 tatggctttc cggtgttcgg gtgttccgta tcctttattt tgagcccaat tgtattgcgg
     1501 aaattcttcg tgcatctttc gcataaaatc gtcgcggtaa gtttttgcaa gtatgctggc
     1561 tgcggcgatg ctcgcataaa tgccatcgcc ttttatgatg caatgatggc gcacatttcg
     1621 ccacgatgta aagcgattgc cgtcgatcaa tattaatgca ggctccactg gcaattgctc
     1681 aagcgcaaga tgcatcgctt tgaacgacgc ccggagaata ttgatgacat cgatctcatc
     1741 attgtcaacc atcgcaacgg catagtgcaa cgcattttcg tggatatagt ctcgtaatat
     1801 ttcgcgttgc tcaggcaaca cttgcttgct gtcgttcaat tcaggatgat aaaaattttt
     1861 cgggaggatc acagcggctg ccaccaccgg tccggcaaaa catccacgac ctgcttcatc
     1921 gcagcctgct tccattcttc ttttcctatg gtagggtttt agcaagaaag gttttgtttg
     1981 aaatcaaaat aaaatcattc aggctattta atcgctgctt tttcaacgac tgttaataat
     2041 tttttattct ggtagtcctg gtaaatattt ttccgataac gatatattag gctcaacaaa
     2101 aaaaattaat cgtggcgtat actgtttaga aacggtttac agcatgatca ttttagagtg
     2161 atcgtgcact ttcgtgcgat atgaaacgag attatacgat tgtctgtttt ggctacacag
     2221 taaccgcaat ctttgcagtt gttcttccag agcaagtatt tttaccgccc aattctaaaa
     2281 ctgaagctgc tgcttaagta aaccaaacag cttctatctg taggtccaat atctgtttat
     2341 gagaaaccaa ttattgctgg caatagtatt gcttggcgtc actactgccg ttgctgcgca
     2401 aaacgcagat tccactacga aactttatgg cgttcgccaa agttggggag gtattccatt
     2461 aacacgctcc cagtatcccg agatccacgg acttgttggc aatttcaaat ggaaagatat
     2521 tgagcctttc cctaacgtat ggaactggca gcaacttgat agtgacatag cgagccatga
     2581 agcaggcttg ccctttcagc taatgatatt tacaaaggat aacgcacctg attggttata
     2641 cacaacagga ggagtgccga aagttatcga atacaacagt acgaatgatt cgatcggcat
     2701 ttcgccttac tatcctgacc cgaattataa gttcttcttt aaaagaatga tcgatactgt
     2761 tgcgaaacat gtaaaagcct ggcccgctaa tcttaaactt tacttaagca tccaggcatg
     2821 cctcggcgag gaattagatt atatcggtta cagaaacgta gaccaggcca gggccacagg
     2881 tttagaccag gaaagcatcc atgtagatcc acagtataaa ttaagctcga accagttggc
     2941 tgtgttattt aaagaattta cgcggtacta ttattacgct tatgttggca gcggtattgg
     3001 gtttttgtgt aacccctcgt gcgctgacgc caacagccag tctaacatca aatgggtgct
     3061 cgactcgtta ccgggcgcta atcttaggta tgccgtgccc ggaaagtcgt ttcagatcaa
     3121 cgatgaattt gacagaatgc catggttact tccggtgctg aatgcaaaat ataacggcgc
     3181 ctacatcagg gcaaattctg atctcgcgaa caacgatgca aacgttggct ggtttaaaat
     3241 tcatccgacc aggaatatgt tttcgttgtt tacatcgatg ttgcattatg gtttagaact
     3301 ctcagaccag atgccgacct atatcaaaaa tccggcttat cggcccgcct ttgatttctt
     3361 caatagatat gcgggagaaa aagacactgc gaccgctgca catgctatgt gtggattgca
     3421 tgatggactt gatgcgtctg attctactcg ttttccttcg gcaatttatg gtaaggcggt
     3481 tcgctcgaat gttctgaggt atatgaatat tcaaaatgct tttgcgtcaa agggcgcact
     3541 actaatggat accagccgcg tttatgtaaa gaacaatggt acggccggcg caacaggcac
     3601 aaatgacgtc ggatggcgga tcatcactgg taattacgag cggtatattc atcaaataaa
     3661 tccgaacggc acgagcgttg gctattggaa tgtcaacgct ttgaatgaca cgaattcaat
     3721 ttacgggagg ttcggccgcg gctttgatgt tgctcatgga aagaacgctt tatttttcga
     3781 cgtcgacaac gggtttctgc attatgctcc gctaaacagt cagtcgcgtg tgatgatctc
     3841 cgtaacttat ctcgattcag gaaacggaag ctggcaatta ttttatgacg cgcaagacac
     3901 tatcaacaag ccttctattg cggtcaactg cgcgaatacc ggtaaatgga agacgacttc
     3961 cgtaacatta gccgacggtt attttggaaa tcggaatgat agcatgtctg atttttatat
     4021 ccggaacaca ggtgcggaaa atgtgatctt ttcgttggtg gagtttgagc gtcccaatgt
     4081 attcgtcaac aataatggtt tattttgctc caacgcttta tcattcgaca ccgtttgtgt
     4141 taacactgta agccgatcta agtttgttgt agtttcaggg gcctttttaa attcttctga
     4201 tgtaaccgtt ggcccattca atggctatca attttcgttt tttgccgaca gcgcgttcaa
     4261 agagtcactc tccatttcta attatggcac ttcattccag gatacgatat acgtccgttt
     4321 tcagccgacg gatagcgttt cttatacagg aaactgcctg atcaccggag gtggggtgaa
     4381 cgatggcacg cttagcctga aaggtgcagg tatcaacaca agaccggaac tctctgcaac
     4441 tgtaaaaaac gttagttgca atggagcaaa agatggagcc atcgacctga atctaagcgg
     4501 tggcattcag ccctttacct acttttggac gaataccggt tcgctcaaag attccaacga
     4561 ggatattaga aatcttagcc catccactta tacagtaaca gtcggctcgt acatgggatg
     4621 cagtaccgct tcgagctatg taattacaga acctaacgcg cttaccatga tcctcactca
     4681 ggatagcatg gtttgcaaag gcggtacaac tagtgtgcat gtttcggcat cgggcggaac
     4741 tgcgccgtat acgggggttg gagatttcgc ggttagttac ggtaagcaaa cctttaccgt
     4801 agttgatgca catgggtgta ttgacacagc gtcgatatat gtttttaatg gcactggggt
     4861 gccccccgcc aagcctgcgg ctatcatatg cacgcttgca gatgctgtag gtttatgcgg
     4921 aggtggcaag ttttcatacg caatagatcc ggttcccggc gccacatcgt acacttggct
     4981 tccaccagca ggctgcagca tcagctcaat cagcaccgat ggcacgcaaa tcctgttatc
     5041 agccccgttg aatttcaccg ctgattctct ttccgtaacc gcgaacaatg cctgcggaag
     5101 cagcccggca ctgaaaaagt ctctgagcgc gcttcccggc aaaccgggcg ctatttcagg
     5161 cccaactacg gtcgtgccat tacaatcagg aattgcattc tcggtcacgc agaccggagc
     5221 gctcggttat acctggacgg tagctcccgg agcaacgatc acgtcgggcc agggcacatc
     5281 ggcgattact gtgaattggg gcaacacgtc aggtaacata aatgtgaggg ccgtgaatgc
     5341 atgtggcagt agtgcgggca gctcaatgtt aagcataacc gttgccaact ataccctcgt
     5401 ttcttccgtt ccttcccttc cgccgtatga taccatttgc attaacggac tgagcgcata
     5461 caaattcttc aatcttgccg gctcaggttt ggacgggtcg aacgttattg tgaaggcttt
     5521 acctggtttc aaagtttcaa ccaccggtgg tggtacgtat acagattcgc ttacaataac
     5581 gaattacggc acctcgatca agcaaaatat ttatgtgaag ttcaatcctg tgattcctga
     5641 ctcttacaat ggcaatataa aaataggcgg gggcggcagt agcccagcgt atgtcagtgt
     5701 aaccggcgta gctgtcaaca gtagccctgc cctgtcggcg aatatcacga atatcagttg
     5761 tagaggcgcc gccaacggag gaatcgatct ttctctcagc ggtggcatgg ctccattcgc
     5821 atatcgctgg accggcccgg gttcttatga ttcgtctgcg caggacatca gcggcctgaa
     5881 tccatcgact tataccgtga ctgttacctc ttacgtgggg tgcaaaacct cctcgagcta
     5941 tttggttacg cagccggatg ctctaacgat gactcttacg gccgatagcg tgatctgcaa
     6001 agacgctact accatcgttc atgtgcgggc ctcaggcgga accgcgcctt atgtgggtac
     6061 aggcgatttt aatgtggcgc caggaaagca aacttatacc gttactgatg cccacggatg
     6121 tacgcagacg caatcaattt ggatcgcaaa tggatctttg atcgcgccgg ccaaaccagc
     6181 acccatcacc ggtgcatatg cagattccgt tggtttatgc ggcggtggaa atttccaata
     6241 taggaccgac ctggtatcca ctgcgacctc atataaatgg atcgcgccgt cgggctgcag
     6301 cattcgttca ataagtagcg atggaacaca gatcgttttg acggtaccca gtggtttcac
     6361 cgtcgacaca ttgagggttg cagcaagtaa tgtgtgtggt gccagcgttc cgcaggcgaa
     6421 aacgctttat gcggttcccg gtcggccggg gccggtttcc ggtccaacat cggtgaagtc
     6481 gtctcaaacc ggagtcgtat ataaaacaac tgccgttagt ggcctgaatt acacgtggtc
     6541 agtccccggc agtgttacga ttgttagcgg gcaggggtcg ggaacgctca aggtaaattg
     6601 gggaaccaaa tcgggcacca taagtgtatt agccaaaaat aattgcggta cgtccacata
     6661 tggttcttcc ctgaacgtct ctgtgggtac agcgctggtg ccggtacaac aggccacgta
     6721 tgcttctgcc gcaaccaaca aactgatcgt gcagccaaat ccagcaaagg acattgccca
     6781 tatttcattc agtgccacgg aaacacagaa cttcagcatc cttttaactg atatgaatgg
     6841 aaagctgttg cagagcaaaa aaggaattgc ggtgaaaggt gagaatacgg tcagcattta
     6901 cattagaaat tatgccagtg ggatttatct cgtctctatt cttaccggtg atggcaaatc
     6961 aacaagggtt aagttactta aagattaatt tgattaggag aagcgaatcc attaaaaatg
     7021 ggtgcaaaga attaagcaat aaaagatttc cttccgcctc tggcattcta aacctggtat
     7081 cgtaacgaaa aaccaagctt cccgcttaac ctgtaaccgc ttgctgtatt tgtcatcaag
     7141 cggtttttat ttcattattt tgtccctggt tcagacataa ttccttgttc tatttcgttt
     7201 ctattgaatc gttttagcgg atgatacagc ctaacgagta tttaaaagca ctggtaccga
     7261 tctttaatgt gaagcgcacg aaggatattt tccaggtgaa tccaaccatc gtacccctgc
     7321 gcggtgaagc agccgaggtt aaggttgatg tgtatgacta caatgcagaa acagtcagcc
     7381 atcatgaatt taccggcgtt caaaaatgtg aacgatttaa agacaatggc aaagtcacat
     7441 ggataaatat cgacgggctg cgcaaaaccg acgttgaaac tatctgtaat gcgttcggca
     7501 tccatccgct gctcattgaa gacattctaa gcgtggggca gcgtccaaaa atggatgaac
     7561 tcgagaacgt gcttttctcg ctgttgcata tgttatactt taatgaagag acagctgcag
     7621 tagaacaaga acaaataagc atcctgctcg gacaagatta cgtactaagt ttccaggagg
     7681 aagcagatcg cgatgtgttc aaccccattc gcgaaaaaat aaacactgcc gggagtaaat
     7741 tacgaacagc cggcgctgat tatctctgtt actcgatgat cgatattatt gttgacaatt
     7801 actacacggt gcttgagcag ctgggggaac atattgaaac gctggaagaa aatattgtac
     7861 gatatggtaa cgcacattct ctcgctcata taatcaacct gcgaaaagaa ctcatcgttt
     7921 taaaacgcac cgtgaacccg gtgcgtgagg tggtaaacgg gttcctgcgc agcgaaagcg
     7981 atcttgtagc agaccgtgtg acaaaatatt tcaaagatgt ttatgatcac attgtgcagg
     8041 ctaatgacct tgtagaaaac taccgcgata tcatgacaag catccaggat ctgtacctga
     8101 acaaagtgaa tcttcgcatg aacgaggtta tgaaagtaat ggccattgtt acctgcctca
     8161 tggcgcctgc cacggtgatt ggcggcatct tcgggatgaa ctttcaaagt attccgtaca
     8221 ttcataacca gtatggtttc tggatcgccg tttccctgat ggtggcgata ccattgttca
     8281 tgatctatgt ctttaagaga agaggttggt tcaagaatta atatacttgt tcaccgccca
     8341 attaccaatg cttcacgttc tcgatttcct ccttacactc ctgcatctcg tcattatatt
     8401 atttaatttg ttcggttgga tttttccgcc cacgcggaaa gcgaacttga tttgcatcgg
     8461 cgcgactgca ttttgctggt tcgtgctcgg aatatggttt ggctggggat attgcccggt
     8521 gaccgattgg caatggcgtg tgaaggagca actgggagaa acaaatttgc caccttcatt
     8581 tattacctat tacgcggaca aagtaacagg caggcacttc agcgatactt tcatcgattc
     8641 tgctacattg atatgttttg ctctcgcgat cttcttttct ctgtacttta attttttcaa
     8701 aaggacaaag acgacctgat gaaacattga tcttaccaat ttattattcg tttgttgtgt
     8761 ggaaacaagt actcgtagca tctcatgtga aaaattttca tgcgactgct tgcgatgcca
     8821 attgtaacag ctttattcct ctgttgtaat gggcgtgcga ctgaatgcat ttcaacgagc
     8881 acgctggctc aacaatttat cgccctagat tttcccagag attcgtggca atattttctt
     8941 caacatttgc ctttgaaaat cgctccgata ctggactata ccggcacgcc tgttttagac
     9001 cagggcaaac acgttgccat cataaattac gatgttggaa attcagacct gcagcaatgc
     9061 gccgatgcgc tcatgcgttt gcgggcggaa tatttatttg ctcagcacag gtacgatgaa
     9121 atcggcttcc atttttgcaa tggcgagtat tatgcgtgga aaatgtattg cgatggatca
     9181 aggccaatat tgaacggcaa taaaatgcat tggctatccg cgcacccgtg cgaattaaca
     9241 cacgagtcat tgcgacgtta tttgaacgtg gtgtatgctt atgccaacac gatctctctt
     9301 gccaaagaac ttacacctgc ggataaattt gaggttggta cggtgatcat caccgcgggc
     9361 agtcctggtc atgcgtgtat cattattgac gaagtatcaa caagtaatgg cggtaaactt
     9421 tataagcttg ccgaaggtta tatgccggcg cagtcgattt atgttttaag caatacgatc
     9481 gatcggagta tcgatccatg gtaccgtttg caatcgggcg taatatctac gtcaagctac
     9541 caattcgtgc actaccaact gggcaaattt gaatgatgtg cagcttcatt aaaaagaaaa
     9601 gccatcgaaa aaaatccgat ggcttttcgg tttctaaaag ctgctcttac agtttcatta
     9661 cttttcttgt ttcggttacg tcaccggaac tgatctttac gaaataaact cccacgggtg
     9721 ctttttccag tattcttgtt gaagtggaac ctgtaatgat gcgctcttcc acaatggctc
     9781 ctgttttatc tgttatcgtg atccgatagc tgttgtttgc gacgccctta aagttaagtg
     9841 ttgcataatc atggaatgga ttcggataca catgcagatc tatcttgccc tgtgaagcat
     9901 tattaagcgc aacaggttgt gtattacatg gtacatgcgc aacgatatca tacacgttca
     9961 tggtggtgag gacatttaag aggccagcca gtctcacgcg gcctcgggca acctgataac
    10021 tgccagcagg tgttggaagg gttaagttga accgtccacc acccaaaaca tccgcatccg
    10081 acaatgcaaa acctgattgc gatgctacta ctccgccgtc cgtgtcgtat actgttagtg
    10141 taatgttttg aagaagctgt gcactcagca ccacatttcc ctcgcctaat ttgaaaccta
    10201 caaggtgacc tcctggcgcg gttgtggaaa acgcaaggtc gagatatgaa tcgtcaaggg
    10261 ctaaaggtgg agtaaggata gcataatcat ttggatctgc cgaaactgca ttgtttgcat
    10321 ttgttacatt gtgttgggca tttacgctgc cgccacgaat ggggggacaa ggtgctccct
    10381 cggaagcata atatactctg atcctgtttt gtgtactaag cagtcctgag attcttattc
    10441 ggacagcggc gatgttcaga gcgccactcc gtgacttgat gctaatcgtg tatcgtgatg
    10501 ttccttgtac ggctgtagcg tctgaaaaat caaacccttg ctttcttccg acgagttggt
    10561 cgttactgtc aaacacggcg atggtcattg attgcagtac atccaaactt aaggctccat
    10621 tgtcattttg aaattgcacg ctaacgttat ctccggccga acccaattga gaccacccaa
    10681 gtttcagtgt agcagaatta gcgataccga tgtctgcctg cataaccgca taattggtgt
    10741 ggtcagcatc tacagcatgt ttggggttgg tgacacccac agaccaaacg aggatatctg
    10801 catagttctt tgccattacc tggtcagttt gtgcgcggga gattgttgcg gaaaggcaca
    10861 ggaccgccag tccgaaaaag tgtaatttgt ttttcatttc gtgattttta gaaattagaa
    10921 aatccgatgt tttataagag gggattgttc gaattcgttt tttggtctgc agaatacgga
    10981 tcagaacttg agatgaagag tggttgaatt tgcaaggcgg ggaatgatta aatgattcca
    11041 ttttaatatg tagattataa acgttgttgc ataatgaaca aacgtcatca actccacagt
    11101 gcaggtacta cattcttccc gatgtagcac aattgcttca aatttcctgc cggttgttag
    11161 cagggcactt atccttaatg cagatgtcat tttcccgccg gttaaaggtg aaaggctgcg
    11221 ttttgtcggg aaaaccgggg actatgaatc gaaaacgccg gtttacattt gcggctcaca
    11281 ttaaagctgt gtataaatgt caacaacaat tgaggcaatc gtgtttgatt tgggaggagt
    11341 gcttatcgac tggaatccgc gttatgtcta caggaccatc tttgattccg aagagaaaat
    11401 cgattggttc tttgataata tctgcacgca cgactggaat gaaaaacagg atgcgggtta
    11461 ttccttaagc acggccactg aagagcttgt tgcccaacat ccggaatggg aacccgagat
    11521 acgagcttac tatgatcgat ggatcgaaat gttgggtggc ccgatgcacg agacagtcaa
    11581 cattcttcgc gacctgagac agcaagagca tttatcgttg tatgcgctta ccaactggag
    11641 ccatgaaacg ttccctgttg ctcttgaacg tttcgatttt cttcaatggt ttgacggaat
    11701 cctggtaagc ggtgaagaaa aaacaagaaa gccgttccct gaattttatc aaaaactttt
    11761 ggaccgctac aatatcgatc ctgccagggc gatctttatc gatgacaact taagaaatgt
    11821 aagggccgcg gaagacgcag gtatcaacgg cattcatttc ctaaacgcaa agcaactgag
    11881 ggaagaactg agaaagtttc atgttgaagt gaaataactt tattacccgt gcgtgtcgtc
    11941 actaacgatg ctaagaaacc ccaaagtgtt gcaagcggag atgctctgtg caagtcggtg
    12001 ataaactctg cgcaactctg tggttttaca aaattttaca acagaggtac aggagttaat
    12061 tgcacagagt gcgcagatgc gtctaaaatt tcgggacacg aagtccacga cgaaaacaca
    12121 aaggtcacaa cgggaggagg accgcaaagt atcgagaagg ggatatgctc tgtgcagctc
    12181 ggtgataaac tctgcgcaac tctgtggttt tacaaatttt acaagagagg cacaggggtt
    12241 aattgcacac agcgcgcaga tgcgtccaaa aatttccggg acacaaagtc cacgacgaga
    12301 acacgacggt cgcaacgcgg gccattaaac tactgactgc agacgggtga cgccgccttc
    12361 gagcacggat ggcatgggca aatgaatttt tcgtatcagc gctccattaa tttcacccac
    12421 acataatcgt cgagcaggag attgtttttc atcgcgttct ttctgcgaat cccttccagg
    12481 taaaagccat tctttcgcag tacatgcatc gaagcggtgt tgtgcgcata tacctcagcg
    12541 taaatacgta ccacatcgaa ttgcttttct atataattta ccaacgcatg aatggctgct
    12601 gtgccgatgc cgaggttcca gtattgttcg ccgatgaaat aaccgatctc catgcccttc
    12661 cggtaaacat ctgttttagg cacgcagcca atgctgccgg ccagtgccga tttgtacagg
    12721 actgcaaaat tcaaaacagg tttttgttta ctgcaatgcg cgatccattg ttcagcatct
    12781 tttaaagtgt aagggaatgg aatactgtcg cgcaggttgt cccaaatctt tctgttgttt
    12841 gcaatgttca caagctgtcg ggcgtcctct cttctccatg gccgtaagat cacatcgttc
    12901 atggttatcg tttgtagtaa gcagttattt acctcgtgcc ggccgaacaa ttttttcagc
    12961 cggttcaaaa aacaacaatc ggaataattt cgcagtcttt aaaattaagt tctgcgcatc
    13021 actggcgcca tacttgcagt gtgagtaacg tcaggataac aagtttaaaa gagtcagact
    13081 tttgcacgtg ctatccggaa aatcaaaagc tatccaattt aaaacgaacg ttatgtcaaa
    13141 cagctcacgc cgaaaatttt taactgagat tgctggcgca accgcatttg gatttttgta
    13201 tcatgcctgt gctccgcata agaaagcaac agttacgcca ggcgccaaaa acgcattggc
    13261 aggttttttt gagatatccc tcgccgaatg gagttttcac aaagcattgt ttgcaaaaaa
    13321 aatgaccaac cttgattttc cggttgtcgc aaaacagcaa tacaacataa gtgttgttga
    13381 gtatgtgaac cagtttttta aagacaaggc aaaggacacc aattatttga gcgagttact
    13441 gaaaaggtgc actgacaatg gtgtaagaaa tcatttgatc atgtgcgatg gcgaaggtaa
    13501 cctcggcgat ccggacaagg cgaagagaat gcaggctgta gagaaccact ataaatgggt
    13561 cgacgctgca aaatatcttg gatgtcttac gatccgcgtt aatgcttttg ggcagggtag
    13621 cgctgaagat gtagaaaagg cttcgattga aagtttgagt aagctgggcg aatatgctgg
    13681 tcaacaaaat attaatgtga tcgtcgaaaa tcacggcggc tatacttcta atggcgaatg
    13741 gatggttggc gtaatgaaag gcgttggccg gaagaacgtt ggtgttttac cggatttcaa
    13801 caatttctgc gtgaaaagag aaggcgggca acagtggacc ggtaaatgcg tagaagaata
    13861 cgaccgttat aagggcgtgt ccgaaatgat gccgtatgca aaaggagcca gtgcaaaaac
    13921 gattgacttc gatgctaacg gcaactgtgt tgagaccgac tattacaaaa tgttgaagat
    13981 aattaaggac tctggctttc acggatacat agggattgaa tacgaaggtg aaaaagcaag
    14041 cgaggaggac ggcgttcgca aaacgaaagc gttgcttgag aaagtcgcag caacgatgag
    14101 ctagcgctaa taaaaatgtc gcataaacct ttcagctgat tgacacaaca ccaggagctc
    14161 gatacaaaaa ttttgctgac tgatcaatga acgccactgt gacgtgttgt tcgaaattca
    14221 accaattaat ttgatcaaaa agattcattg catttatttt cagtcgtggt taaatcctac
    14281 gtttgcgaat aaagaaaagt tatggctgaa gcaagtgtgg cggtggcaca acccacatac
    14341 acattgaaac aacttgtgct ttactttttg aagcttggct attccggctt tggaggcccg
    14401 gttgctcttg ttggatacat gcatcgcgac cttgtcgaaa aaagaaagtg gatcagcgaa
    14461 gaagattaca aagaaggact gacattggct caattggcac cgggcccgct ggcagcgcag
    14521 ttaggtattt atcttgggtt cgtccactac cgctacttag gggctacgct ggtcgcaatc
    14581 gcatttgtgc ttccatcctt cttaatggtt ttggcgctcg gtatccttta caaaatgtat
    14641 aacgggcttc cgtggatgca ggcggtattt tacggagttg gagccgcagt cattggaatt
    14701 atcacgatga gctcatacaa gctcacaacg aaatcgattg ggaagttcaa tgccgaatcg
    14761 ttcagaacga aatggttgtt atggttattt tatttgatcg ccattacgat cacttttatt
    14821 tcgcagacgg aagtgctcgc tttgtttctt gctgcgggac tgatttatat gttttataaa
    14881 gcgccgcctt catggtcgaa aaagaacgct gtaaaatcgt cattctttct tttgaccgga
    14941 atcgggtttt gggaatatga ttcgaagaca ttgggacaga tcgccgtgtt ctttaccaaa
    15001 gccggcgcat ttgtgtttgg cagcggactc gctatcatcc catttctgca tggagctgtg
    15061 acagactatc attggatcga cgagcatgaa ttcctcgatg ccgttgctgt tgctatgatc
    15121 acgcccggcc ctgtagtgat aactgtggga ttcatagggt atctcgttgc aggattcccc
    15181 ggcgcatgcg ttgcagcagc ctgcacgttt cttccatgtt atcttttcac ggtaattccc
    15241 gcgccttatt tcaagaagta tgcgaagaac acttccatca aggcgtttgt ggatggaata
    15301 acgtcggcgg tcatcggtgc attgacgggc gctgtagtga tcattgccat aaatacattt
    15361 acacaaaatc atacggtggc aatagatatt ccctcggtac tgatcgccgt tggaactgtg
    15421 tttgctttat tgtacatcaa aaagatccag gagccgtaca taattttagt ggcagcggtt
    15481 atcggacttc ttcttaaatc atttttgtag aagaaaatgc aataaaaaag aactttaaat
    15541 acaaatgaag aagcctatct ctaaacagga actcgaagca ttaaggaaaa cttccaaagt
    15601 gcatttgctt gacgtccgct cgcaacaaga atttgaaaag cagcatatcc cggttgcgat
    15661 taacgtaccg gcagacgact taccgaatgc attgcagcaa ttttcaagcg acgatacttt
    15721 tgtatgtgtc tgtaaccacg gaggacaacg ttcacaaaag agcgcagaat atttgcacag
    15781 ccatggtttc gcaaatgcgt tttacctgga aggaggtacc gctggttggt ttgataacga
    15841 tcatcacacc gactgaccgc attatctttc tcactttctc gcggccgaaa aaagacgttc
    15901 cgccttttac ttaatttcgc ccattcaaca aacacaaaat gcgcattctt attgacatgg
    15961 acgatgtgat ggccgatgca gttgcacgct ttctcgaatg gtacgaaaga gattttggcg
    16021 tccgctatac aacagcgcaa ttgcacggca ccaagctgag cgaagttgta ccgccggaac
    16081 ataaaatgat cgtccagaac tatccgcatc aaaaaggttt tttcagagac ctgccggtga
    16141 tacaggacag caaagagatc attgaagcgc tgaataataa atatgaagtg ttcgtggttt
    16201 ctgcggcaat ggaatttaaa cattctttat tcgataagtt cgaatggctt gatcagcact
    16261 tccctttcat tcactggaag cgaagggttt tttgcggtga aaaaacaata gcaaagggag
    16321 atgtgctgat cgacgaccac gaattcaacc tttcttcttt tgctggtcgc ccgatcgttt
    16381 ttactgcgcc acataatgtg cactatacca agtatgagcg aatggataaa tggctggatg
    16441 caaaaaactt cttcgccgac cttccgtgaa taaagaatta attgctgcta ttttttattt
    16501 cttttaattt ccattattct aatgcatgct tatgaaaaga ataatggcgc tcgttctgct
    16561 gctgtttgca gcgatatgtt tgcgggcgca aactccaaaa tactaccgcg tccaaatatt
    16621 tactgatgat gccggccttc gggagttggc gattaaaggc gtcggcattg atcacggcga
    16681 ctatcaacgc ggaaaatatt tcattggcga attctcgcaa cgcgagctgg agcttattaa
    16741 acaaagtaaa tatccgttta aagttctcat cagcgatatg tcggcttatt atgtt
//
LOCUS       DASQJI010000861         7410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1065770,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000861 DASQJI010000000
VERSION     DASQJI010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7410
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065770"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..4056)
                     /locus_tag="VEV83_22370"
     CDS             complement(<1..4056)
                     /locus_tag="VEV83_22370"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HYK47947.1"
                     /translation="MKHSFFSTAASRIAVILPFILFLSCNKKTKLIDVDPAFSQYIDA
                     YTSGVISKKNTIRLVLAADASTTHTLNENVKETLFEFSPAVAGEAYWIDARTIEFKPE
                     KDLTPQQLYEVNFKLGKVLHVPSKFSDFKFNVQVVKPSFEVNEYGLRSNNKEAMSLSG
                     VLLTADVEESTKIEQLLTASLNGTAMKINWQHNESNKEHQFVINNVPRANNAQKLLLQ
                     WKGEALNIDENGEKEIQVPAKGDFTLLDVRASEEDEQYALVQFSDPISSAQSLDGLLM
                     ISDVDNPAYTIIGSEIKLYASEPLDGNYTVTVQPGVENQWGDKLKKSYTSNVFFENRM
                     PSVKIQGSGNILPNSTGRLVLPFEAINLKSIDVSIIKIYENNIAQFLQMNNMNGGQDL
                     RRVGNPIKEATVRLDDDKTLNLHHKNSFSLDLDKFIRAEPGAIYRVTIGFRPDYSLYS
                     CDSLVNDKEDNDWYYYNTSDENVLDEDEDFWNRYDTYYPYGYNWDERDNPCYSSYYNK
                     EKFATRNILASNIGLTAKFSTNKNLFVAVNDLISTDPMKDVSLEVLDYQQQVIAKGSS
                     DGDGLAMFDLKRKPYLLIAQQGNQFGYLKLDDGSSLPLSRFDVSGDEVKNGIKGYIFG
                     ERGVWRPGDSLFLSCIINDKNNPLPKDYPLEMELTSPRGQLYKKIVQTNAEDGFNVFR
                     TATDADVPTGNWTCRVKAGGAVFEKKLKIETVMPNRLKINLDFAGLDALGQNANINGT
                     LTARWLFGATAQNLKAKVDAQLYKKKTKFPKLDRFVFDDPTSDFSSQSKTIFDGTLND
                     QGTAVVNPNFESGENAPGQLLANIVVKVFEPGGNFSIDNFSMPFNPYSSYAGVAVPPG
                     DKTWGFLQSGKSHKFDIVDVDTKGKYVPGNSTMQVEIYRIQWRWWWDEDDDLSNFTES
                     DYNKFIRKDTVRLTNGQGYYNVKMDEDDWGRYLILVKDLRSGHKTGATFFVDDYSWQA
                     RAGTSDPSAAAMLSFTSDKEKYNVGDNINLSIPSSKGGRALISIESGSKVMKTYWVNT
                     VQGQTKFSFKADKEMSPNIYVNVSLIQPHAQTVNDLPIRMYGVIPIMVDDKNTILTPV
                     IKVADVIRPETNNGITVSETNNKHMTYVIALVDDGLLDLTHFKTPNPHDAFYAREALG
                     VKSWDLYDDVIGAFASEIQRILTIGGDAEADVASNTRRANRFKPVVQFMGPFTLNGGS
                     RTHNFTLPPYMGSVRAMVIAAGDDAYGMAEKDVTVKKPLMILPTLPRVVGPGEEVKIP
                     VTIFATENIIRNVSLSIQTNPFISAGGTQTISFSKPGEQQAYFSAKVNNATGIGKVKI
                     VASSGKEQTVYETEIDVRNPNPYTTQVTEATL"
     gene            4598..5086
                     /locus_tag="VEV83_22375"
     CDS             4598..5086
                     /locus_tag="VEV83_22375"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HYK47948.1"
                     /translation="MNEHFQQFRKQITKPSAFKLYTLRHLPAAYFAGLRIELLEETKA
                     IVSVKQKWFNKNPFHSIYFAVLSMAAELSTGVLCMGNIYKRKPSVSMLITEQKGVFHK
                     KATGTIIFVCDDGNKIATAVEDAMSTKMPVTVSCYSRGLNSKEELVSEFWITWSLKVR
                     NV"
     gene            complement(5136..5525)
                     /locus_tag="VEV83_22380"
     CDS             complement(5136..5525)
                     /locus_tag="VEV83_22380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47949.1"
                     /translation="MNEPIMSRIAIILLALVMAVFGVYHFIAPQNLLAYVPSFLPNAG
                     NLWVYLPGAAFIFTAIALITRKAVKVACYLLTIMLLIFVITIHVPNYLNAGDADVRTA
                     EFMNMLKDTAIAAFAMHVAANTGTEMI"
     gene            5635..7041
                     /locus_tag="VEV83_22385"
     CDS             5635..7041
                     /locus_tag="VEV83_22385"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYK47950.1"
                     /translation="MKLSFHGAARTVTGSKHLITLNNGKNILLDCGMFQGLGRDTFPL
                     NSSFGFDPGSISYLLLSHAHIDHCGLIPKLVKEGFAGKIFCTPATKDLASVLLMDSAE
                     IQRDDIKFSNKRRLKKGLPPYDVLYDVSNVQSSLPLFSTIQYDNWFTIEEGVQVLYTD
                     AGHITGSAAVHVRISENGNTTQISFSGDVGRYNDIILRSPNTFPQADYIIIESTYGNS
                     LHESVSNTPEELDRWIESTCRQKQGKLIIPAFSVGRTQELLYFLNELSTDRKLNGIPV
                     FVDSPLSYEATEVVKHHPENFNFHIKDLLKVDDDPFQFPELKFIESVDESKRLNDMHE
                     PMIIISASGMADAGRIKHHIMNNINDAKNTILIVGYCEPHSLGGFLMRGEKEVRIFGE
                     QYRVVAGVGVMRSMSAHGDYKDLLHFLDCQKVNAVKKTFIVHGEYDVQQDFREKLMQK
                     GLREVYVPERHQQFVLNE"
BASE COUNT         1981 a         1621 c         1642 g         2166 t
ORIGIN      
        1 caaagtagcc tctgttactt gtgttgtata tggatttgga tttcgtacat cgatctccgt
       61 ttcataaaca gtctgttctt tgccgctcga tgcaacgatc ttcactttgc cgatgcccgt
      121 tgcattattg acctttgcgg agaaataagc ctgttgttca cccggttttg aaaagctgat
      181 cgtttgcgtt ccccctgcac tgatgaatgg atttgtttgt atgctgaggg aaacgttccg
      241 aatgatattt tcggttgcaa agatggtaac aggaattttt acttcttcac ccgggccaac
      301 tacacgcggc aatgtgggta gtatcattaa aggctttttc actgttacat ctttttccgc
      361 cattccgtag gcatcgtcac cggcagcaat taccatcgct cgcacactgc ccatgtaagg
      421 cggcaatgtg aaattgtgtg tgcgacttcc tccattcaat gtaaacggtc ccataaactg
      481 cacgacaggt ttgaaacggt ttgctcttcg cgtgttgctc gcaacatcag cttccgcgtc
      541 gccaccgatc gtgaggatgc gctggatctc cgacgcaaac gcgccaatca catcgtcgta
      601 cagatcccaa ctctttacgc ctaacgcttc acgcgcataa aatgcgtcgt gcggatttgg
      661 tgttttgaaa tgtgtgagat cgaggaggcc gtcatcgact aacgcgatca catacgtcat
      721 atgtttatta ttggtttctg aaacggtgat gccgttattc gtctcaggcc tgatcacatc
      781 tgcgactttg atcactggcg ttaagatggt gttcttgtca tcaaccatga tcggaataac
      841 gccgtacatt cttatcggca gatcattcac tgtttgcgcg tgcggctgga tcaaactcac
      901 attcacataa atgttcgggc tcatctcttt gtctgcctta aaagagaatt ttgtttgccc
      961 ctgcactgta ttcacccagt atgttttcat caccttactt ccgctttcaa tgctgatcag
     1021 tgctcgtcct cctttactgc ttgggatcga aagattaatg ttgtcgccga cgttgtattt
     1081 ctctttatct gacgtaaatg atagcattgc cgctgcggaa ggatcactcg ttcctgccct
     1141 ggcttgccaa ctgtagtcat ccacaaaaaa tgtcgcaccc gttttatggc cactgcgcag
     1201 atcctttacc aaaatgaggt atcgacccca atcatcttcg tccatcttta cgttgtagta
     1261 tccctgccca ttcgttaatc gaacagtgtc ttttcggatg aacttattgt agtcgctttc
     1321 tgtgaaattg ctgaggtcat catcttcatc ccaccaccag cgccattgga tcctgtatat
     1381 ctcaacctgc attgttgaat tgccgggaac atacttacct tttgtatcca catcaacgat
     1441 atcgaatttg tgcgacttgc cagattgcag aaatccccag gtcttatcac cgggcggtac
     1501 cgctacgcct gcataagatg aatatgggtt gaaaggcatt gagaaattat cgatgctgaa
     1561 attcccaccc ggctcaaaaa ctttcacaac aatgttcgcc agcaactgcc cgggcgcatt
     1621 ttcgccagac tcaaagtttg gattaacgac ggcagttccc tggtcattaa gtgtgccatc
     1681 aaaaattgtt tttgattgtg atgagaaatc ggaagtcggg tcatcgaaaa caaaacggtc
     1741 aagtttggga aatttcgttt tctttttata tagctgcgca tccacctttg cttttaggtt
     1801 ttgcgcggtt gctccgaaca accaccgtgc tgtaagagta ccattgatgt tggcgttttg
     1861 tccgagcgca tccaatccgg cgaaatcaag atttatcttc aaacggtttg gcatcaccgt
     1921 ttctattttt aatttctttt cgaacacggc gccgccagct ttcacccgac aggtccagtt
     1981 gccagtcggt acgtcggcat ctgttgcagt tcggaataca ttgaagccat cttctgcgtt
     2041 cgtctgcaca atttttttat agagctggcc acgaggagaa gtaagttcca tttccaaagg
     2101 gtaatctttt ggaagcggat tatttttatc gttgataatg cagcttaaaa acaagctgtc
     2161 gccgggccgc catacgccgc gctcaccaaa gatgtacccc tttatcccgt tctttacttc
     2221 gtcgccgcta acatcaaagc ggctgagagg taaactgctt ccgtcatcta atttcaaata
     2281 gccgaattgg ttgccctgtt gtgcgatgag aagataaggt ttgcgcttta gatcgaacat
     2341 cgctaatcca tctccgtcgc ttgatccttt tgcaattacc tgttgctggt aatcgagcac
     2401 ttccaatgaa acgtccttca ttggatccgt cgagataaga tcattcactg caacaaataa
     2461 atttttgttg gtagaaaatt ttgcagtcag cccgatgttg cttgcaagaa tgtttctcgt
     2521 tgcgaatttt tctttattgt agtaagaact gtagcaggga ttgtctcttt catcccagtt
     2581 gtaaccgtac ggataatacg tatcgtagcg gttccagaaa tcttcgtcct catcaagtac
     2641 attttcatca ctggtgttgt aatagtacca gtcgttatct tctttgtcat tcaccaggct
     2701 gtcgcagcta tacaaagaat aatccggacg aaagccgatc gttacacgat agatcgctcc
     2761 gggctctgcg cggatgaatt tatcgaggtc taaagagaac gaatttttat ggtgaaggtt
     2821 cagcgtctta tcatcgtcta aacgaacggt ggcttcttta attggattgc cgacgcgccg
     2881 gagatcctgg ccgccgttca tgttgttcat ctgcaggaac tgcgcaatat tattttcata
     2941 gatcttgatg atcgaaacat cgatagattt aagattgatc gcttcgaaag gcaaaacaag
     3001 acgaccggtg ctgttcggta aaatatttcc cgagccctgt atcttgacgg aaggcattcg
     3061 gttttcaaaa aacacattcg acgtataaga ttttttaagc ttatcgcccc attggttttc
     3121 tacgccgggc tgaacggtga ctgtataatt tccatcgagc ggttcggatg catataattt
     3181 tatttcgctt ccgattattg tgtaagctgg attgtcaacg tcactgatca tgagaagccc
     3241 gtccaggctt tgtgcggaag aaatgggatc gctgaattga acgagcgcat actgttcgtc
     3301 ttcttcggat gcgcgcacgt ctagcaaggt aaaatctcct tttgcaggaa cctggatctc
     3361 cttttcaccg ttctcatcga tgttcaaagc ttcgcccttc cattgcagca atagcttttg
     3421 tgcattgttt gcacggggaa cattattgat gacgaactgg tgttctttgt ttgattcatt
     3481 gtgctgccag tttattttca tcgcagtgcc attcaaagaa gctgtgagca gttgttcgat
     3541 ctttgttgat tcttccacat ctgccgtgag cagcacgccc gacaaactca ttgcttcttt
     3601 gttgttgctg cgcaggccgt attcattaac ttcaaatgaa ggtttcacca cctggacatt
     3661 aaacttgaag tctgaaaatt tcgaaggcac atgaagcact ttcccgagtt tgaaattcac
     3721 ttcatacaat tgttgaggcg taagatcttt ttccggtttg aactcgatcg tgcgtgcatc
     3781 gatccaatat gcttctccag caaccgctgg cgagaactca aagagcgttt ctttgacatt
     3841 ttcgttgagc gtatgcgtag tcgacgcatc tgctgctaac acgaggcgga tcgtgttctt
     3901 ttttgaaata acgcctgagg tataggcgtc gatgtactgg ctaaaggccg gatcaacatc
     3961 gatgagcttt gttttcttgt tacaagaaag gaaaaggata aaaggcaata tgacagcaat
     4021 gcggctggca gccgtgctga aaaaactgtg tttcatataa aaggggaatt tactaaagac
     4081 ggttctgtaa tggctcatct aaattaagac agggtttttg atccggaaaa gtaaatattt
     4141 gttaagtgtt gtgatattct ttttgcttgc ccaagaaaag ttatcaaatt ttctgaaagc
     4201 tggtactatc gaaccttggt ggtttttgat ttttgaaaca cgaactcttc acggcgcaaa
     4261 gacgaatctg tgctggaaaa tctggctgcg gtgaaaagtt caaacttgaa attatcttcc
     4321 tgttcatagt gctgctttgt ggccgtcgtg gttcattgtg ttcgtcgtgc tccggaattt
     4381 ttggagcaca atcaacacga agtcttagaa tacacgaaga aatttctaaa atcattcgct
     4441 ctggctactg gagtccgttt aaacttgcaa tatccgaaaa atggttcggt gtgctttaaa
     4501 ggtaattgtg tttctcaacc tcaagcaaat ccgtattcaa cagccattgc agcgacaacc
     4561 cgaccatgtc gatgaggtgt tttaactttc cggttagatg aacgagcact tccaacaatt
     4621 cagaaagcag attacaaagc catcagcttt caaactttat acactgcggc atcttcctgc
     4681 tgcatacttc gccgggctga gaatagaatt actcgaggag acaaaagcga tcgtgtctgt
     4741 caaacaaaaa tggttcaaca aaaatccttt ccattcgatc tacttcgccg tgctgtcaat
     4801 ggctgctgaa ttaagcaccg gcgtgctatg tatggggaat atttataagc gcaaaccttc
     4861 agtaagcatg ctcataacgg aacaaaaagg agtattccat aagaaggcga cagggacaat
     4921 aattttcgtt tgcgacgatg gcaacaaaat agcgaccgca gttgaagacg cgatgtcaac
     4981 gaagatgcct gttactgtta gctgttattc gagggggtta aacagcaaag aggagcttgt
     5041 ctctgaattt tggataacgt ggagtttaaa agtcagaaac gtgtagcgac aaagattttt
     5101 cctccttgtc attacaacac tcgctgcgat ctttttcaga tcatttccgt ccccgtatta
     5161 gcggcgacat gcatagcaaa agctgcgatt gctgtgtcct tcagcatgtt cataaattct
     5221 gcagtacgca catctgcgtc gccggcatta agatagttcg gaacatgaat agtgatcaca
     5281 aagatgagca gcatgatcgt cagcagataa caagcaactt taaccgcttt acgcgtgatc
     5341 aaagcaattg ccgtgaagat aaatgcggcc cccggcaggt acacccacaa attgcccgcg
     5401 ttaggcagga aagagggtac ataagccaaa agattttgtg gcgcgataaa atgataaact
     5461 ccaaatactg ccattaccaa tgccaataaa ataatggcga tacgtgacat aattggttcg
     5521 ttcattgggg aagttttaga ctattaagtt acggctattc tcatttagta aaaaaatatt
     5581 tacccccacc tttatcaccg cttatcttta atcaacaaag caaaacaaat cgcaatgaaa
     5641 ctttcctttc acggtgcagc acgaacagta actggttcaa aacatctcat cacgttgaac
     5701 aatggtaaaa atatcctcct cgattgcggt atgttccagg ggttgggccg agatacattt
     5761 ccgttgaata gcagttttgg attcgatcct ggttcgatca gctatttgct tttgtcgcac
     5821 gcacacatcg atcactgcgg actgatacca aaactcgtga aagagggatt cgccggcaag
     5881 atattttgca cgcccgcaac gaaagacctg gcttcagtct tgctgatgga cagtgctgag
     5941 atccagagag acgatattaa attcagcaac aagcggcgat taaaaaaagg gcttcctcct
     6001 tatgatgtgt tgtatgatgt gagtaacgtt caaagctcgt tgccgttatt ttccacaatt
     6061 caatacgaca actggtttac gatcgaagaa ggcgtgcagg tattgtacac agatgcggga
     6121 catataaccg gcagtgcggc cgttcatgtg cgcatttccg aaaacggcaa cacaacgcaa
     6181 atctcattta gcggcgatgt gggaagatat aatgatatca ttctccggtc gccaaacact
     6241 tttccgcagg ctgactatat catcatcgaa agcacctacg gtaacagcct tcatgaatcg
     6301 gtttccaaca ctccggaaga gcttgataga tggatcgaat caacctgtcg gcaaaagcag
     6361 ggcaaactga tcattcctgc ctttagtgtt ggcagaacac aggaactgtt gtatttcctc
     6421 aatgagctga gtacggatcg caaattgaat ggcattcctg tatttgttga cagtccgctg
     6481 agctatgaag caacggaggt tgtaaagcat catccggaga attttaattt tcacattaag
     6541 gacctgttga aggttgatga cgacccgttt caattcccgg aattaaaatt tattgaatca
     6601 gtcgatgaaa gtaagaggct gaatgatatg catgaaccga tgatcatcat ttcagcaagc
     6661 ggaatggcag atgcgggccg tattaagcat catatcatga acaatataaa tgatgcgaaa
     6721 aacaccatat tgatcgttgg atattgtgag ccgcattctt taggcggatt tttgatgagg
     6781 ggcgaaaagg aggtgcggat ctttggagag caataccgcg tagtggccgg ggttggcgtt
     6841 atgagaagta tgagtgcgca tggcgattat aaagacctgt tgcattttct ggattgccaa
     6901 aaagtaaatg ctgtgaaaaa gacatttatc gtgcatggag aatatgacgt gcagcaggat
     6961 tttcgggaaa agctgatgca gaaaggattg agggaagttt atgttccgga gaggcatcag
     7021 caatttgttt tgaatgagtg agcagtaatg agtaagtcaa aagtcaaaaa gtatgctgca
     7081 gttcgtctcc gtgtagtaaa gccttagcgt ttcgaaagat caaaaaccac caagacccca
     7141 aggcactaag tttcacagag ggtttctgtc tcacttcttg tttttgcaca gctggtgctg
     7201 aacctgaaag ttgatcgaag ctgatatttt gaaccacata ggacatagag cacaataggc
     7261 acaacacata gactatgtga aatttccatg tttctatgtg gttcacattc ttgattcacc
     7321 cgaaataatc aaaatcattt ttatatttac gacatttcta taacaacaaa aaatcaatca
     7381 catgaaaaag cttgtattat tctctgtgtt
//
LOCUS       DASQJI010000862         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1370479,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000862 DASQJI010000000
VERSION     DASQJI010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370479"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1670
                     /locus_tag="VEV83_22390"
     CDS             186..1670
                     /locus_tag="VEV83_22390"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK47951.1"
                     /translation="MKKNFYISISIILLQAFLQQALSQADVQLSNLVAPTKVNVPLLP
                     DKDNLRSLGNLNKGWKDLYMRGIVWREGYTWLAGVYYSGNTLVGQSAGHTLITTGEST
                     NQNNTFVGTNAGFNDSTGGYNTFIGTSAGYSNTTGGSNTFVGQGAGNDNTTGQSNTFL
                     GVQAGTRNTSGISNVMIGEVAGGFNTIGHNNVYIGNEAGYLNNAGTYNTFVGDSAGRA
                     VTSTNNTMIGSKSGASTGSATGNTFLGSQSGVYNTTGSYNTAIGYFSLNNNNAATGNT
                     ALGYSTGTLYTNGAYNTFIGRDADASAASLTNSTAIGNTSRITASHQVRIGNSAITSI
                     GGYADWSNISDGRFKKNIKENVPGLSFINKLKPITYNLDVSGLQKKLSANEEDANDKD
                     AGVQQAIAAKEKLLQTGFVAQQVEKAAKEIGYEFSGVDAPKNDNDLYSLRYAEFVVPL
                     VKAVQELSKMNDEKDKLIAQQQQQITDILKRLEAVEMRGSVSQK"
BASE COUNT          651 a          486 c          532 g          576 t
ORIGIN      
        1 atcaagggac tatggcgcca cgtgcgactc aggggcgttt agttacggga gtgtctattg
       61 ttgcacaagg atagtttgca aattttgtga atcgccgatg gcgatgccac caacaacacc
      121 gctttcaatt taatagcaga cctcacataa aatttcctat tttcagttac taaacttttc
      181 acgctatgaa aaagaacttt tacatttcta tcagtatcat cttattgcag gctttcttgc
      241 agcaggcgtt atcgcaggca gatgttcagt tatcaaacct cgttgctcct actaaagtta
      301 atgtgccgct gcttccggat aaagacaacc tgagaagtct tggcaatttg aataaaggat
      361 ggaaagatct ttacatgcgc ggcattgttt ggcgcgaagg ctatacatgg ctcgccggcg
      421 tttattattc aggtaacaca ttggttggcc agagtgccgg tcacacgctc atcaccaccg
      481 gcgaatcaac caaccagaat aacacattcg ttggtaccaa tgcgggcttt aacgatagta
      541 ccggtgggta caatactttc atcggtacat ctgccgggta cagcaacacg acaggaggca
      601 gcaacacgtt tgttggccag ggcgcgggca acgataatac cacaggacaa tcaaatacat
      661 tcctgggcgt gcaggcggga acacgaaata catcaggcat atctaatgtg atgattggtg
      721 aagtggcggg cggttttaat acgataggcc acaataatgt ttatataggc aacgaagctg
      781 gttacctgaa caacgccggc acctacaata cgtttgtagg cgattctgca ggccgagctg
      841 ttacttcgac caataatact atgatcggca gtaaaagcgg tgcttccacc ggttcagcta
      901 ccggcaatac atttttaggt tctcaatcag gtgtatataa tacgaccggt tcgtataata
      961 ctgcgattgg ctatttcagc ctgaataata ataatgcggc tacaggaaat acggcattgg
     1021 gatatagcac cggaacactg tatacgaacg gtgcttacaa tacatttatt ggccgggatg
     1081 cagatgcatc cgccgcgagc cttaccaaca gcactgcgat cggcaatact tcgcggataa
     1141 ccgcaagcca ccaggtgcgc ataggcaaca gtgccataac aagcatcggc ggatatgctg
     1201 actggagtaa tatttcagac ggccggttca aaaaaaatat aaaagagaat gtgccgggtt
     1261 tgagctttat caataaacta aaacctatta cttacaatct cgatgtaagc ggcctgcaaa
     1321 aaaagttatc ggcgaacgaa gaagatgcca acgataaaga tgcgggcgtc caacaagcga
     1381 tcgctgcaaa agaaaaatta ttacaaaccg ggtttgtcgc gcagcaagta gaaaaagcag
     1441 ctaaagaaat tggctatgaa ttttccggtg tggatgcacc caagaacgat aatgatcttt
     1501 acagcctgcg ttatgcagaa tttgtggtgc cgcttgtaaa agctgtgcag gaactttcaa
     1561 aaatgaatga tgaaaaagat aaactaattg cgcagcaaca gcaacagatt actgatattc
     1621 taaaaagact ggaggcggtg gaaatgcgcg ggagtgtttc tcagaaatag agaaacttag
     1681 tgggacacgt gggacgtagg ggacgccagg gcgcgcggtt agttgcaggg gcggctaatg
     1741 tgcgagggag atggaggagg cggtagtgaa tgggccatta aaacagataa agaaagcaat
     1801 atcaaaacac aattgtcaca ttcccttcta atagtttctt cgttttgtcg gacgttggcc
     1861 actcgtacga caagtgctga tttgttaccg cagccaccac caggcctaac ccaaaaaatg
     1921 ctctaatgcc cgaaaataat acatccggtt gtttgggtta cgtagatatg attagacact
     1981 cggaacgacg aaccacttcc tcatttctta tttctcattt cttatttctc attcgcgttc
     2041 cctgcaggtt cctcgttagg aacgtttggg ttacagagat atgattagac actcggaatg
     2101 acgaaccact ttctcattcc ttattttcgg tttcttattc tcatttgagt gcgttgcaga
     2161 ttcctcgtta ggaacgctca ggcttcgtag tgctgattag tcactcggaa tgacgaacca
     2221 ctttctcatt ccttatttca ggttt
//
LOCUS       DASQJI010000863         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_913938,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000863 DASQJI010000000
VERSION     DASQJI010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913938"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VEV83_22395"
     CDS             complement(<1..220)
                     /locus_tag="VEV83_22395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47952.1"
                     /translation="MQQVQDNLENIHPTRKKPIFPVQESLRVYLKKYAREVKLPADYS
                     DLMQFRYAVPLFDKTGKDTNWEIVKYDMR"
     gene            463..1122
                     /locus_tag="VEV83_22400"
     CDS             463..1122
                     /locus_tag="VEV83_22400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HYK47953.1"
                     /translation="MQTQSFTFQVSEFIGNVSAEYIIPDNYVAVMTLAHGAGAGMNHS
                     FMISLARSLAERGITTLRFNFPFTENKKGRPDFPPVAHKTIEVGLAHASETFPSLPLF
                     ASGKSFGGRMSSQYLSTLPDTKVKGIIFYGFPLHPPKKPSIERAEHLKNVSIPMLFLQ
                     GTRDELAKWDLIESVCGSLSSATLVKIDGADHSFKAGKQNVMQILTDETSNWIQNIIK
                     T"
     gene            1122..>1637
                     /locus_tag="VEV83_22405"
     CDS             1122..>1637
                     /locus_tag="VEV83_22405"
                     /inference="COORDINATES: protein motif:HMM:NF014147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47954.1"
                     /translation="MKYRHDKLMIVCFGFSLISCLSAHAQNTNRSSVPNEPSPVSVSV
                     YVSSLAGDRLAKKPDIHFSRRENVSLPVIKVDDKIRYQKIEGFGATFNEAGMICLNAL
                     RVEDRAKVLQSLFDSVAGAGFSVMKSPIAACDFASAGPWYSYDETKDDTLMKHFSIER
                     DLAPNGLITFIN"
BASE COUNT          446 a          360 c          371 g          460 t
ORIGIN      
        1 cacgcatgtc gtactttaca atttcccaat tggtgtcttt tcctgtttta tcgaacaggg
       61 gaacggcata ccggaattgc atgagatcgc tataatcggc aggcagtttt acttctcttg
      121 catatttttt tagatagacg cgcagagatt cctgtaccgg gaagatgggt ttcttccggg
      181 ttggatggat attctcaaga ttatcctgca cttgttgcat gtgaatagta ttgcaaatta
      241 gtacttaaaa ggctcgactg ccgctctgga acacaacgaa cacaaagtgc gcacaacggg
      301 caccaaggtt gtgtttactt ctcgccgaat gaatttgtgt ctccgtagaa ggagactccc
      361 gttttcacgg gaatgacgtt ccgaggatgg gcggttgctc tttgtagcag gatggtgccc
      421 attcataaca atgcagtaaa ttgaaacgaa aattggaaac gcatgcaaac gcaatctttc
      481 acgttccagg tttccgaatt tattggtaat gtctctgctg agtacatcat tccggacaac
      541 tatgttgctg tcatgacgct tgcgcatggc gccggcgccg gcatgaacca ttcgtttatg
      601 atctcacttg cgagatcatt agcagaacga gggatcacta ctttgcgatt taattttcca
      661 tttactgaaa acaaaaaagg aagacccgat ttcccgccgg ttgcgcataa aactattgag
      721 gtaggtcttg cgcatgctag cgaaacgttt ccgtcattgc cgctttttgc ttctggcaaa
      781 tcattcggtg gacgcatgag ctcgcaatat ttatcgacac taccagacac gaaagttaag
      841 ggcataattt tttatggctt tccgcttcat cctccgaaaa aaccttccat tgagcgcgcg
      901 gaacatttga agaacgtatc gatcccaatg ctttttttgc agggaacgcg tgatgaatta
      961 gccaaatggg acctgattga atctgtttgt ggatcgcttt catccgcaac gcttgtgaag
     1021 atagacggcg ccgatcattc gtttaaggca ggcaagcaaa acgtaatgca gatacttaca
     1081 gacgaaacca gcaactggat tcaaaacatc atcaaaactt aatgaaatat cgccatgata
     1141 agttgatgat cgtttgtttt ggcttttcat tgatcagttg cctaagtgca catgcccaaa
     1201 atacgaaccg ttcttctgtt ccaaacgaac catcaccagt ctcggtatct gtgtacgtgt
     1261 catcgttagc cggagacagg cttgcaaaaa aaccagacat acactttagt cggcgtgaaa
     1321 acgtgtctct tcccgttatc aaagttgatg acaaaatccg ctatcaaaaa attgaaggat
     1381 tcggagcaac gttcaacgaa gcgggaatga tctgcctgaa cgcgcttcgc gtggaagacc
     1441 gcgctaaagt attgcagtcg ttatttgatt ctgtcgccgg tgctggattc agcgtaatga
     1501 agtcaccgat cgccgcctgc gattttgcat cagcaggtcc gtggtattct tatgacgaaa
     1561 cgaaagatga tactttaatg aaacatttca gtatcgaaag agatttggct ccaaatggat
     1621 tgatcacttt tataaac
//
LOCUS       DASQJI010000864         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1370829,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000864 DASQJI010000000
VERSION     DASQJI010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370829"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VEV83_22410"
     CDS             <1..297
                     /locus_tag="VEV83_22410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HYK47955.1"
                     /translation="ANECCLHYNIELSFINHLSDYGLIELAFIEQQQFIPADQLQQLE
                     KFIRMHYDLNINLEGIEAITHLLARMEQLQQQVTTLRNKMDLFSATGDLYSQFK"
     gene            547..>1852
                     /locus_tag="VEV83_22415"
     CDS             547..>1852
                     /locus_tag="VEV83_22415"
                     /inference="COORDINATES: protein motif:HMM:NF024810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HYK47956.1"
                     /translation="MTSQLRSLNQSKTSFAQKKARCKNSFLLPIMTAVVLMFQGTAFA
                     QGIWTPIATVSPHTNGGGMLLLSDGSVLCKSFGGGGDGIGNIYDKLTPNKNGSYVNGT
                     WSSIAPMKKTRLYYSSQVLKDGRVYVCGGEYGTGDSLGETYDPLTNVWTMAGIIGTRI
                     SDANSEIFEDGKIMQAYVAGNLKGTKIYDPATNLYSDGPSCLGIHNESTWLKLAGGSW
                     LMVDRGTRNSERFIPSLNKWVADAMLPADLYDGCGFESGTAILLPDGRSYWVGATGKT
                     AVYTPSGNNNPGSWAATADLPHNQGQPDAAGALMIDGKILLATSPKPNGCNVFQTPTS
                     YYVYDYIANSYTRINAPSGDTTDPVPCYYSGMLCLPNGQILYSLQYSNQYYVFTPSGS
                     QLNKSRPTIQSLQKITNKKYMLTGTGFNGNSEGAVYGDDWQMN"
BASE COUNT          530 a          422 c          428 g          472 t
ORIGIN      
        1 gcaaatgaat gttgtcttca ttacaatata gaattatcat tcatcaatca ccttagtgac
       61 tacggcctga tagagcttgc tttcatagaa cagcagcaat tcattcctgc agaccagttg
      121 caacaactgg aaaaattcat caggatgcat tacgacttaa acataaatct tgaagggatc
      181 gaagcgatca ctcatttact tgcgcgaatg gaacaattgc agcagcaagt aacaacgctc
      241 agaaacaaaa tggatttgtt ttctgcaacc ggcgatctgt attctcagtt caaataaatt
      301 ctgtccgcgg ttacatcggg tatatattca aaagcaagct ttcgcataaa gtgcagcttt
      361 tttattttga aacgagagcc gcgtaaaaaa tatttcctat atcttaggcc gcatatgctc
      421 agctagtcgg gcatagcatg cgtttacgca gccttgtttt ttcccgctta agattgttca
      481 agttccaggt cgtttatgtt gcgctcaaca tgaaagggcc attttgtaat agtaaagtca
      541 aaaccaatga catcacaact acgctcgctc aaccagtcaa aaacatcgtt cgctcagaaa
      601 aaggccaggt gcaaaaatag tttcctctta ccgatcatga ctgcggtcgt tctcatgttt
      661 cagggtactg catttgcgca gggaatatgg acgccgatcg cgacggtatc gccgcataca
      721 aatggcggag gcatgctgct actttcggat ggctccgtat tatgcaaaag ttttggcggc
      781 ggtggagacg gtatcggaaa catttacgat aagcttacac cgaacaaaaa cggaagctat
      841 gtaaatggca cctggtcgtc aattgcaccc atgaagaaaa cgcgactata ttattcttcg
      901 caagtattga aagatggccg cgtttatgtt tgcggtggtg agtacggcac tggcgattcc
      961 ctcggcgaaa cgtatgaccc gctcacaaat gtttggacta tggccgggat catcggcact
     1021 cgcatcagcg acgcaaattc tgaaattttt gaggacggaa agatcatgca ggcgtatgtc
     1081 gcgggaaatt tgaaaggcac taagatctat gatcccgcaa ccaacctata ttcagacgga
     1141 ccatcgtgtc ttggtatcca taacgaatcc acatggttga aactggccgg tggcagttgg
     1201 ctcatggtgg acaggggaac aagaaattcg gaaaggttta ttccctcact taacaagtgg
     1261 gttgcagatg cgatgctgcc tgcagatctg tacgatggtt gcggtttcga atccggcact
     1321 gctattttgc ttccggatgg aaggtcttat tgggttggag cgactggtaa aactgcggtc
     1381 tacacacctt caggcaacaa caatccgggc agttgggctg ccaccgccga tctgccacac
     1441 aaccagggtc agccagatgc agccggcgct ctcatgatcg acggaaaaat tcttcttgca
     1501 acttcaccaa aaccaaatgg ctgtaacgtg ttccagacac ctacatcgta ttatgtgtac
     1561 gattacatcg caaactcata tacccggata aacgctccta gcggggatac taccgatccg
     1621 gttccgtgtt attattccgg tatgttgtgc ctgccgaacg gacagatatt atacagcctg
     1681 caatattcaa atcaatatta cgtgttcacg ccaagtgggt cacagctcaa taaaagcaga
     1741 ccgacgattc aatcgcttca aaagatcacc aataaaaaat atatgctaac gggcacggga
     1801 ttcaacggga attctgaagg ggcggtttac ggagacgact ggcaaatgaa ta
//
LOCUS       DASQJI010000865         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_758970,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000865 DASQJI010000000
VERSION     DASQJI010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758970"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VEV83_22420"
     CDS             complement(<1..547)
                     /locus_tag="VEV83_22420"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYK47957.1"
                     /translation="MRNYKHLNLLLAAFLLVVFSSPALAQTEKKITGTITKQSGEALS
                     NVSVTIKGSSHGAMSDSKGEFSMTVPENATLVISYVGYKTKEVSAKDQTSLNIVLEEE
                     QNELSQVVVIGYGTVKKSDLTGSVSSVKEQDLKVVPVTSFDQALQGRAAGVQVTTLSG
                     KPGAETSIRIRGTTSINAGNEP"
     gene            complement(615..1349)
                     /locus_tag="VEV83_22425"
     CDS             complement(615..1349)
                     /locus_tag="VEV83_22425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HYK47958.1"
                     /translation="MDIITIDHKSALPLHMQVEEMLRKMIEQPEYQNGKLLPNEVLIA
                     NKLGISRNTVRQAANKLVHERLLIRKKGVGTKVAKNNITTRLNKWTSFTHEMDEKGVV
                     FKNHSLKVSRVSPDKDVKQFFNIGDDAKVIKLERLRGLNKGPVVYFISYFHPRVGLTE
                     NEDFSKPLYETLEKDHHVTVAVSKESISAILANKRLAEKLGIDEGDPILFRKRLVCDP
                     GDRPIEYNLGYYRADSFTYTIDIARD"
     gene            1501..>2207
                     /locus_tag="VEV83_22430"
     CDS             1501..>2207
                     /locus_tag="VEV83_22430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47959.1"
                     /translation="MKKILVYFLAVVIAIPAPGQDTTKPTSSFKFTAEAAPEWTRLFE
                     RTSGWFGADGIFSIPLSGVDKNNNEGNDSTLLLFSDTYIGEVQDGKPLPGNTMVNNTV
                     AIIKGNEPVLSKIHFYYKRSADGKPETFFVPQTSTEGKPQLFWLGDGFVNREMNNTLY
                     IFGYKVERTGAGVFDFTEPGVSIIAIPKGSPPFNGQRQIETSLHINNKTLGEGNMGAG
                     LLVNTKWAGAPAPDGYV"
BASE COUNT          585 a          504 c          469 g          649 t
ORIGIN      
        1 atggttcatt acccgcgttg atagaggtag ttcctctgat gcgtatggaa gtttcggcgc
       61 cgggtttgcc cgacaaagtt gtgacctgca caccggctgc tcttccctgc aaagcctggt
      121 cgaaagaggt aacaggcaca acttttaaat cctgctcttt cacagatgaa acggagccgg
      181 tgagatcact tttcttcacc gtaccatagc cgatcacgac aacctgcgac aattcgtttt
      241 gttcttcttc aagaacgatg ttcaatgacg tttgatcttt cgcagaaact tcttttgttt
      301 tataaccgac atatgaaatc accagcgttg cattttcagg gacggtcatg ctgaattctc
      361 ccttactatc agacatcgct ccatggctac tgccttttat ggtcacgctc acattactca
      421 acgcttctcc cgattgcttc gtgatagtcc cggttatctt cttctcagtc tgcgctaatg
      481 ccggagacga gaacacgaca agtaaaaatg cggcaagcag taagttcaga tgtttatagt
      541 ttctcattag tcaagattat tcgtcagaaa aaattcgttt caaaaactca ttattcatca
      601 ctcattactc atcttcagtc tcttgctata tcgatcgtat atgtaaagct gtcggcgcga
      661 tagtaaccaa gattatattc gatcggcctg tcgcccggat cgcataccaa tcttttacga
      721 aacaaaatgg gatcgccttc atcaataccg agcttttccg ccagcctctt gtttgcaagt
      781 attgcgctga tgctttcttt ggaaacggca accgtcacgt gatgatcttt ttcgagcgtt
      841 tcatacaaag gctttgaaaa atcctcattt tccgtaagcc caacgcgcgg atggaagtaa
      901 gaaataaaat acaccacggg acctttgttc aatccgcgca gtctctcgag cttgatgact
      961 ttcgcatcgt ctccaatatt aaaaaattgt tttacgtcct tatcaggaga cacgcggctc
     1021 actttgagtg aatggttttt aaacacgacc cccttctcat ccatctcatg cgtgaagctg
     1081 gtccatttgt tgagccgtgt agtgatgttg tttttcgcga ctttagtgcc tacccctttt
     1141 tttcgtatga gcaatcgttc gtgaacaagt ttgttggccg cctggcgtac ggtatttcgg
     1201 gaaattccaa gcttgttcgc gataagcact tcgtttggca acagttttcc attctggtat
     1261 tccggctgct cgatcatttt ccggagcatc tcctcaacct gcatgtgaag cggcaaagca
     1321 cttttatggt ctatcgttat aatatccatc aggcaagtag tatgtctata tgttcagaca
     1381 aagtgcaaag aaaaagaagt tttgttcata tgttcaaaca aactctgaaa atattttttt
     1441 agatcgccaa aacaattgat ttttacgcac tccggtccat aagcgtcaaa attttttgtc
     1501 atgaaaaaaa tccttgtata ctttctggct gttgttattg cgattcctgc tcctgggcag
     1561 gacacaacga agccgacatc atctttcaag ttcactgcag aggcagcgcc ggaatggaca
     1621 cgattgttcg aacgaacgtc tggatggttt ggggctgatg gaatattctc tatcccattg
     1681 agcggcgtag ataaaaataa caatgaggga aatgattcga cgcttctcct cttcagcgac
     1741 acgtatattg gcgaagtaca agacggcaaa ccattaccgg gaaatacaat ggtgaataac
     1801 actgttgcca tcataaaagg caatgaacct gttctttcaa aaattcattt ttattacaaa
     1861 cgatctgctg atggaaagcc ggaaacattt tttgttccgc agacgtcaac cgagggaaag
     1921 ccgcaactgt tttggcttgg cgatggtttt gtgaatcggg aaatgaataa cacactttat
     1981 attttcggat ataaagtaga gaggaccggc gccggtgttt ttgattttac tgagccgggt
     2041 gtttcgatca ttgccattcc gaaaggaagc cctccgttta acgggcaaag gcaaattgaa
     2101 acctcgttac atatcaacaa caaaacactt ggcgaaggaa acatgggggc aggtcttttg
     2161 gtaaacacaa aatgggcagg cgctcccgcg cccgacggat atgtata
//
LOCUS       DASQJI010000866         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1528786,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000866 DASQJI010000000
VERSION     DASQJI010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528786"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..1155
                     /locus_tag="VEV83_22435"
     CDS             46..1155
                     /locus_tag="VEV83_22435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
                     /protein_id="HYK47960.1"
                     /translation="MRIDELHNDALQLLKRLIATPSFSKEEDKTAGLIETFLQARNIE
                     SARLLNNVWAKNKFFDKEKPTIFLNSHHDTVRPNKAYTQDPFLPLEKDGKLFGLGSND
                     AGGGLVSLIAAFVYFYDQPDLKYNLVLAATAEEEISGTNGVEALLDDPQFISETNLHS
                     FEGWSAIVGEPTQMNMAIAEKGLLVLDCIAHGKAGHAAREEGVNAIYKAIRDIAWFSS
                     YKFDKVSKLLGPVKMSVTIINAGSQHNVVPHECRFTVDVRVNELYDFEELLEIIRKNV
                     ECDVIPRSMRLRSTNIALDHPLVQAGIRLGKCYYGSPTTSDKALMPFPALKIGPGDSA
                     RSHTADEFISVNEIAEGIEMYIELLNSVILVAGYR"
     gene            1196..1564
                     /locus_tag="VEV83_22440"
     CDS             1196..1564
                     /locus_tag="VEV83_22440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HYK47961.1"
                     /translation="MKSYRDLEIYKESKRLAIEIHRVSLSLPKFEMYEEGGQIRRSSK
                     SVTAAIVEGYGRRRYKGDYIRHLIYALSECDETIEHLDFLFETESLRDLEKYTALRKS
                     YDSLSKKINKFLQWVEDNLQ"
     gene            1607..>2017
                     /locus_tag="VEV83_22445"
     CDS             1607..>2017
                     /locus_tag="VEV83_22445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HYK47962.1"
                     /translation="MKLWQKHTTSLREVEKFTVGNDREFDLLLAPFDIIGNIAHAKML
                     ASVGLLTNEEANALVQELREIYKRTQPHDSPLEVGGFTIDKNIEDIHSQIEFLLTEKL
                     GDVGKKIHSARSRNDQVLLDIKLFLRSEIEKLVNS"
BASE COUNT          621 a          408 c          477 g          511 t
ORIGIN      
        1 tcaaaacact ggcgcgcacg tctccggcac gctgataact aactaatgag aattgacgaa
       61 ctacataatg atgcgttgca gttattaaaa aggctgatcg ccacgccgtc attttcaaaa
      121 gaggaagaca aaactgcggg cctcattgaa acttttctgc aagcaagaaa tatcgagtcg
      181 gcacgcttgc tcaacaacgt ttgggcaaaa aataaatttt tcgataaaga gaagccgacc
      241 atttttttaa actctcatca cgatacggta aggccaaata aagcgtacac acaggatcca
      301 tttttacctc ttgagaaaga tggaaaatta tttggcctcg gcagcaatga tgccggcgga
      361 ggtttggttt cgctgatcgc ggcgttcgtt tatttttatg atcagccgga tctgaaatat
      421 aatcttgtgc ttgctgctac tgcagaagaa gaaatctctg gtaccaatgg tgtagaagcg
      481 ctgttggatg atccgcaatt catttccgaa acaaatctcc acagttttga aggatggagt
      541 gcaattgttg gcgaacctac acaaatgaat atggccattg cagaaaaagg tttgcttgtg
      601 cttgactgca tcgcgcacgg aaaagccggc cacgccgcgc gcgaagaagg tgtgaacgcg
      661 atctataaag cgatccggga tattgcctgg ttcagcagtt acaagtttga caaggtatcc
      721 aaactcctcg gcccggtgaa gatgagcgta accatcatca atgcgggctc gcagcataat
      781 gttgtgccgc acgaatgcag gttcacagta gatgtgcgcg taaatgaatt atacgatttt
      841 gaagaattgc ttgaaataat caggaaaaat gttgagtgtg atgtgatacc gcgcagcatg
      901 cgtcttcgat cgacaaatat tgcgttggac catcctcttg tgcaggcagg tataaggttg
      961 ggtaaatgtt attatggttc accaacaaca agcgacaaag cgctgatgcc gttccctgcg
     1021 ttgaagatcg gtccgggcga cagcgcgaga agtcatacgg cagatgagtt tatttccgta
     1081 aacgaaatag ctgaaggaat tgaaatgtac atagagttgt tgaacagcgt aattttagtc
     1141 gccggctacc ggtagccagt tgccggtttt gttatttaac cttaaaccat gatttatgaa
     1201 aagttatcgg gatctagaaa tttacaaaga gtctaaacgg cttgcgatag aaatacaccg
     1261 ggtaagctta tcgctcccga agtttgaaat gtacgaggag ggtggtcaaa taaggcgctc
     1321 atcaaaatcc gtaactgcgg caattgttga agggtacgga aggcgacggt ataaaggtga
     1381 ttatataaga catcttatat acgctctttc ggaatgtgat gaaacaatcg agcatcttga
     1441 tttcttattt gaaactgaat ctttaagaga tctggagaaa tacactgccc tgcggaaaag
     1501 ttacgattcg ttaagtaaaa agataaataa gtttcttcaa tgggtcgaag ataatttaca
     1561 ataaccgaat gtaccggcga ctggtaaccg gcaactggca actcacatga aactttggca
     1621 aaaacataca acgtcgcttc gcgaagtgga aaaattcacc gtcggcaacg accgtgagtt
     1681 tgatttgctg cttgcaccgt tcgatataat cggcaacatc gcgcatgcaa aaatgctcgc
     1741 ttcagttgga ttgcttacta acgaagaagc aaatgcgctc gtacaagaat tgagagaaat
     1801 ttacaaaaga acgcaaccac atgactcccc tttagaggtt gggggcttca ccattgacaa
     1861 aaacatcgaa gacatccatt cgcagatcga atttctcctc accgaaaaac tcggcgacgt
     1921 tggaaaaaaa attcattctg cacgaagtcg caatgaccag gtgctgctcg atataaaatt
     1981 gtttttgcga agcgagattg aaaagctcgt caatagt
//
LOCUS       DASQJI010000867         6029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1988539,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000867 DASQJI010000000
VERSION     DASQJI010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6029
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988539"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1541)
                     /locus_tag="VEV83_22450"
     CDS             complement(<1..1541)
                     /locus_tag="VEV83_22450"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HYK47963.1"
                     /translation="MQRRKFLKSTSAAGVTLTSLFTVTTSTYAKNKIQDTPPDTFELN
                     EATIDMLQQYMQSGKYTSRTITDLYLTRIAAIDKSGPKLNGVIELNPDALSIADAMDA
                     ERKAGKLRGPMHGIPVLIKDNINTGDKMMTTAGASALQGNHASKDAFIIKQLRASGAV
                     LLGKTNLSEWANFRSTHSTSGWSSRGGQTRNPYILDRNTSGSSSGSGAAAAANLCAVA
                     IGTETDGSVVSPASVNGLVGIKPTVGLLSRSGIIPISATQDTAGPMTRTVKDAAILLG
                     ALTGADDDDAVTNNSKGKSFTDYTTYLDANGLHGKRIGVEKGFLDGVKQIVDVYKEAI
                     DLLKSKGATIVEIELQKALSDMGNAEFLVLQYEFKDGVNRYLASANAKVKTLKDVIEY
                     NKQNEAAAMPFFKQEILEMCEAKGDLNSSEYKEALSKTLRTRLIIDDIIADNKLDAIC
                     GVTNGLSWCIDLINGDYDTGFSYSTPAAMAGYPHITVPMGLVHGLPIGLSFVGTAYAE
                     PQLLTL"
     gene            1536..1709
                     /locus_tag="VEV83_22455"
     CDS             1536..1709
                     /locus_tag="VEV83_22455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47964.1"
                     /translation="MHVVSSLWVKIHFIEKDLMRESGTINVMPLTFAWLLPKDAQAET
                     FMSWNVITKKLFI"
     gene            1734..2987
                     /locus_tag="VEV83_22460"
     CDS             1734..2987
                     /locus_tag="VEV83_22460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HYK47965.1"
                     /translation="MTKTVIVCPSCRTEFEPTEAIREEVQKELRQQMRDWLQKKEETY
                     KQKEFEFHKQLQTKDEEVSMRLAEERKKLQADLENSIRRSLAADFDNQLKMLQRSAAD
                     SEEKLKEARRKELEFLQKEQQFKNKEAELEIEMQKKLLDERNRISEDVRRLEEQKNQQ
                     RLTEFQLRLAESEKKMKDQERLIDEMKRKAEQGSMQLQGEVQEVLLETILQSTFPHDK
                     ITPVGKGVRGADCIQTICNPFGNECGKIIYESKRTANFSIDWIDKLKADMRSQGADIA
                     VIVTQTLPRDMERFGERDGVYICSFHEVRSLATVLRNSILKVFALTKSQEGKGDKMHM
                     LYDYLTGQEFSEQWKSIREGFLSLKINIQRERDAMEKLWKAREKQLEKVLLSAAQIAG
                     SVEGIAGQDAVNLNLLEDDLTNLFD"
     gene            3101..3679
                     /locus_tag="VEV83_22465"
     CDS             3101..3679
                     /locus_tag="VEV83_22465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47966.1"
                     /translation="MKKTITLFALLCLFCIERATAQLERGNVIVGADLANLNFGLNKG
                     SVTSISLTPSAQWLIKNNLAIGAYVNFGIITSKDYTNTDYGVGVLGRYYIVDQNVNML
                     KRGNWFLEANAGFQGENIKDGNSTNGLGLGFGPGYAYFITHNIALESLLKFDLNVGFG
                     NTTTTSDLNLHFGFQMYLSGKETVHDVKENER"
     gene            3913..4347
                     /locus_tag="VEV83_22470"
     CDS             3913..4347
                     /locus_tag="VEV83_22470"
                     /inference="COORDINATES: protein motif:HMM:NF013814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HYK47967.1"
                     /translation="MKKTLSHLLLSIVFSAVLVPSFAMTIAPPASDESSVPTRDSAAS
                     LTREQFDKAMMEFKSLSRHDRKQRVSEAKKTLKQYKADKRAGKAEPSTNTVLLVILAI
                     LLPPLAVYLHEGTINGKFWLSILLTLLFWIPGVIYALIVVLS"
     gene            complement(4472..5551)
                     /locus_tag="VEV83_22475"
     CDS             complement(4472..5551)
                     /locus_tag="VEV83_22475"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HYK47968.1"
                     /translation="MNFFIDPDIAKARTIDTDFYTDPKFYEEAKEKIFARSWQFVGDA
                     DKLRHVGDAIPFVLLENYLDEPLLITKDKDNNIHCLSNVCTHRGNLVVYEPCKLNQLK
                     CRYHGRLFSLDGTFISMPEFKEVENFPTADDDLHHLPLFKWGQLLFTSLHPEADAELF
                     LGEMMQRMNWFPIDELEFRAELSKDYFVDANWALYCENYLEGFHIPFVHAGLNQVLDF
                     GEYTTEILKYSNLQIGVGKKGDVCFELPSTSPDFGKDIAAYYFWAFPNMMFNFYPWGL
                     SINIVEPLDVGKCRVRFLTYVSDDSKLNRGAGSGLHTVELEDEEVVQNVQKGIRSRFY
                     KHGRYSVKREQGTHHFHSLISDFMK"
     gene            5770..>6029
                     /locus_tag="VEV83_22480"
     CDS             5770..>6029
                     /locus_tag="VEV83_22480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HYK47969.1"
                     /translation="MGYNLSEQEIIRRSKLEKLRALKIDPYPAALFPVTHYSSEIKNI
                     YSEETKDQLSNVCVAGRIMSLNDKGKVFFVKIQDSKGIIQLYV"
BASE COUNT         1718 a         1278 c         1394 g         1639 t
ORIGIN      
        1 agagtcagta actgcggctc ggcgtatgcc gttccaacaa atgataaacc gatgggcaat
       61 ccgtgcacga ggcccatggg aaccgttatg tgcggatagc cggccattgc cgccggcgtt
      121 gaataagaaa atccggtgtc ataatccccg ttaataagat caatgcacca cgatagtcca
      181 tttgttacgc cgcaaatagc atcaagttta ttatcggcaa ttatatcgtc gattatcaaa
      241 cgtgttcgca gtgttttgct gagagcttct ttgtattcgc tgctattcaa atctcctttt
      301 gcctcgcaca tttctaatat ttcctgttta aaaaagggca tggcagctgc ttcattttgt
      361 ttgttgtatt caatcacatc tttgagtgtt tttactttcg catttgcaga tgccaggtag
      421 cgatttactc cgtctttaaa ctcatattgc agtacaagaa attctgcgtt gcccatatcg
      481 cttaacgcct tttgcaattc tatttctacg atcgttgcac ccttgctttt caaaaggtcg
      541 atcgcttctt tatacacatc tacgatctgc ttaacaccgt cgagaaagcc tttctctact
      601 ccgatgcgtt tgccatgtaa accattcgca tcaaggtacg tggtgtaatc tgtgaaggac
      661 tttcctttac tattatttgt cacagcgtca tcatcatccg cgccggtcaa agcgcccaat
      721 aatattgccg cgtcttttac tgtcctcgtc atcggaccgg ctgtgtcctg cgtcgcagaa
      781 attggaataa ttccgctacg gcttaacaat cccaccgttg gtttaattcc gacaagcccg
      841 tttaccgacg caggcgatac aacggaacca tctgtttccg taccgatcgc tactgcacag
      901 agattcgccg ccgcagcagc gcccgacccg gaacttgaac ccgacgtatt tcggtcgagt
      961 atgtatggat tgcgcgtttg ccctccgcgg ctgctccagc cactggttga atgcgtggaa
     1021 cggaagttgg cccattcgct caagttcgtt ttgcctaaca gcacagcgcc tgatgcccgc
     1081 aattgtttta tgatgaatgc gtcctttgag gcatgatttc cctggagggc acttgcgccg
     1141 gccgtcgtca tcatcttatc gcccgtattg atattgtcct ttatcagcac tgggatcccg
     1201 tgcataggtc cgcgcagttt tccggctttt ctttctgcat ccatcgcgtc ggcaatacta
     1261 agtgcatccg gatttagttc aataaccccg ttcagtttcg gtccgctttt atcgatggca
     1321 gcgatgcgtg ttaagtacag gtccgttata gtgcgtgaag tatatttccc cgactgcata
     1381 tactgttgaa gcatatcgat ggttgcttca tttaattcaa aagtatcggg aggtgtatct
     1441 tgaattttat ttttggcata cgttgaagta gttacagtaa aaagagatgt caaagtgact
     1501 ccggcggcgg aggtactctt taaaaatttt cttctttgca tgtagtttca agtttatggg
     1561 tgaagataca ttttattgaa aaagatttga tgcgggaaag tggcaccata aacgtaatgc
     1621 cgctcacctt tgcatggctg ctgccgaaag acgcgcaagc agagactttc atgagctgga
     1681 atgtcattac aaaaaaatta tttatttagc tctatcttgt aaaaaagaat gtcatgacga
     1741 agaccgtgat cgtttgccct tcgtgccgga ccgagtttga gccgacagag gcaattcgtg
     1801 aagaagtgca gaaagaatta agacaacaaa tgagggactg gctgcaaaag aaggaagaaa
     1861 cctataagca aaaagaattc gagttccaca aacaacttca aacaaaagat gaagaagtga
     1921 gtatgcggct tgccgaagaa agaaaaaaac tacaggctga ccttgagaac tctatacgaa
     1981 gatcgctggc tgctgatttt gacaaccagt taaaaatgct gcagcggtcc gctgccgaca
     2041 gtgaggaaaa attgaaagag gcccgcagga aagaacttga gttcttacag aaagaacaac
     2101 aattcaaaaa taaagaggca gaactcgaga tcgaaatgca aaagaaatta ctcgacgaac
     2161 gcaatcgcat ttcagaagat gtgcgccgcc tcgaagaaca aaaaaatcag caaaggttga
     2221 ccgagtttca actgcggctt gccgaatcgg aaaaaaagat gaaagaccag gaaaggttga
     2281 tcgacgagat gaagcggaaa gcggagcagg gaagtatgca gttgcagggt gaggtgcagg
     2341 aagtattgct ggaaacgatt ctgcaaagca cttttccaca tgataagatt actcctgtgg
     2401 gaaagggtgt gcggggtgca gattgtatcc aaacaatttg caatcctttc ggtaatgaat
     2461 gcggcaagat aatttacgag agcaagcgta cggcaaattt ttcgattgac tggatagata
     2521 aattaaaggc cgatatgcgg agccagggtg ctgacattgc ggtaatagtg acgcaaactt
     2581 tgccgaggga catggagcgg tttggtgaaa gagatggcgt ttacatctgc tcgttccacg
     2641 aggtgagaag ccttgccacc gttttaagaa atagcatttt gaaagtgttt gcattaacga
     2701 aaagccagga aggtaaaggg gataaaatgc acatgcttta tgattattta accggccagg
     2761 aatttagcga gcaatggaag tcgatccgtg aaggatttct aagtcttaaa attaatattc
     2821 aacgcgaacg ggatgcgatg gaaaaattat ggaaggcaag agaaaaacaa cttgagaagg
     2881 ttctcctgag tgcagcgcag atcgcgggtt cggtggaagg cattgcaggg caggatgccg
     2941 tgaatctgaa tttgcttgag gacgatctta cgaacctgtt tgattagtgg aaatgtattt
     3001 ttgtatgcac ttgcgagttc gtcaagtgat caggtacctg atcaacggtg aaacatgtct
     3061 ttttgaacgg caattgattt aatagctaaa cttacaaatc atgaagaaaa caattacgct
     3121 atttgcatta ctatgccttt tctgcattga aagagcaact gcccagctcg agcgaggcaa
     3181 cgttattgtg ggcgctgatc tcgctaacct aaatttcggg ctaaacaagg ggtcggttac
     3241 cagtattagt ttaacgccct cggcgcagtg gctcatcaaa aacaacctgg caatcggtgc
     3301 ctacgtcaat tttggcatta taacgtcaaa agactacacg aatacagatt acggtgtagg
     3361 cgttcttggc cggtactata tcgtcgatca aaatgtaaac atgctgaaac gtggtaactg
     3421 gtttcttgag gcaaacgcag gattccaggg cgaaaacata aaagacggaa actcaacaaa
     3481 tggattaggt ctcggatttg ggcccggcta tgcgtatttt ataacgcata acattgcact
     3541 cgagtcgctc ctgaaattcg atttgaatgt aggtttcgga aatacgacca ctacaagtga
     3601 tctaaatttg cattttgggt tccagatgta cctgtccggc aaggaaacag tgcatgacgt
     3661 aaaagagaac gagcgatagg ttttgaagga ggcagctttc atggcttgaa atagagacag
     3721 tctaaactca atcaaattgt tgaaaaagga aaatttgaaa agctggccag ggatacgaat
     3781 tctgattagt tgaattgaaa attgtaaccg gaaatttgcc attctttcgc gcgacattaa
     3841 gtaatttcgg gtgaaatagg aacactatta actatgcaaa acactttatc tcaaaccaca
     3901 aaaatctagt acatgaaaaa gactttatca cacctcctgt tgtcaatcgt attcagtgcc
     3961 gtactggtgc cttcctttgc aatgactatt gcaccgcccg caagcgatga atcttcagtt
     4021 cccaccaggg attcagctgc ttcattaacc agggaacaat tcgataaggc catgatggaa
     4081 tttaagtcac tttcccggca tgacaggaag cagagggtct cggaagcgaa gaagacatta
     4141 aaacagtaca aggctgacaa gcgcgctgga aaggcagagc cgagcactaa tacggttttg
     4201 ctggtgatcc tggcgatcct gcttcctccg ctggctgtat atcttcacga agggacgata
     4261 aatggaaagt tttggttaag catattgctg acgctcttat tctggatacc gggcgtaatt
     4321 tatgcgctca tagttgtatt gtcgtaacct gtttcggcga aatttttact aatctccttt
     4381 tcatcccgcg aaacggcagc acgttgattc gcgggatttt ttatttcaat gtaccagaga
     4441 cgggacttgt caatttcttt aatcgtaaga tctatttcat aaagtccgag atcagcgaat
     4501 gaaaatggtg cgtaccctgt tcccgtttca ccgagtatct tccatgttta taaaaccgtg
     4561 aacgaattcc cttttgcaca ttttgtacaa cttcttcgtc ctccagttcc acggtatgca
     4621 gaccgctgcc ggcgccacgg ttcaatttgc tgtcatcgct cacgtaagta agaaaacgca
     4681 cccggcattt gcctacgtca agcggctcta caatatttat cgataaaccc cagggataaa
     4741 aattgaacat catgtttgga aaggcccaga agtaataggc agcgatatct tttccaaaat
     4801 caggcgaagt ggaaggcagt tcaaaacaaa catctccttt tttcccgacg ccaatttgca
     4861 ggttcgaata ttttaagatc tcggtcgtgt attccccgaa gtcgagcacc tggttcaaac
     4921 ctgcatgcac aaaaggtata tgaaaaccct caagataatt ttcacaatac aacgcccagt
     4981 tcgcatctac gaagtaatct ttcgacagct cagctctgaa ttcgagttcg tcaatcggga
     5041 accaattcat gcgctgcatc atttcaccca ggaacaattc ggcatctgct tccggatgca
     5101 agctcgtgaa tagcaattga ccccacttaa atagcggcaa gtggtgaaga tcatcatcgg
     5161 cggtgggaaa attttcgacc tctttgaatt ccggcatcga aataaacgtt ccgtcgagcg
     5221 aaaacaaacg tccatgatac cggcatttca gctggtttag cttgcagggc tcatacacga
     5281 ccaggttgcc ccggtgggtg cacacattgc tcaggcagtg aatattgtta tccttgtctt
     5341 ttgtaatcaa tagcggttcg tccaggtagt tttccaggag gacaaatggg atcgcgtcgc
     5401 cgacatgcct caacttatca gcgtccccaa caaattgcca ggatcgtgca aaaatttttt
     5461 ctttagcttc ctcataaaac ttcggatcag tataaaaatc tgtgtctatt gttctggctt
     5521 ttgcgatatc tggatcgata aagaaattca tcacgaatcg attttgctct aagataagcg
     5581 gatttgttat tcaccgggat gcggcttttt gtattgctta tatttgcgca ccttaatagt
     5641 ttgaagtttg aggtttgaag tttgaggttt gagcttgaat tcagagttgg tgttaagttt
     5701 caagcaaatc tgcaatctga aatctgcaat tgtaaatcgt aaatcgcaaa tcgtaaatcg
     5761 taaattgtaa tgggttataa tttatcggag caggaaataa ttcggcgaag taaactggag
     5821 aaactgagag cgctgaagat agatccatac ccggcagcgc tgttcccggt cacacattat
     5881 tcgtcagaga taaaaaacat ttatagtgag gaaacgaagg accagctcag caacgtttgc
     5941 gtggctggca ggatcatgag cctgaatgac aaaggcaaag ttttttttgt caagatacag
     6001 gacagcaaag ggattatcca gctttatgt
//
LOCUS       DASQJI010000868         3202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_604776,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000868 DASQJI010000000
VERSION     DASQJI010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604776"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..715
                     /locus_tag="VEV83_22485"
     CDS             56..715
                     /locus_tag="VEV83_22485"
                     /inference="COORDINATES: protein motif:HMM:NF016277.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47970.1"
                     /translation="MIDDIHFPENLTGRQLDEYLSRGWFRMGQTIFTTDVVPLNDSVY
                     AVYWLRIDLRRLKYGKTQKKLFVLNKNFTVTIQPLSINSELEDLFTLYRTAVDFTPPQ
                     SVEEYLFLGINQNIYDTYLIQIRDHGQLIAAGIFDNGETSIAGILNFYDPSYKKYSLG
                     KYLMLIKAEHAIKMGKAWYYPGYIASGFSKFNYKLFPDKHATEMYDKDSKTWLPVRLF
                     P"
     gene            complement(789..1235)
                     /locus_tag="VEV83_22490"
     CDS             complement(789..1235)
                     /locus_tag="VEV83_22490"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HYK47971.1"
                     /translation="MRNKLLVAACLLFTLAILNACNKDDENASPTITNFSGTLSGANE
                     TPANASTATGTANFSYNSSTRILSGTVTYSGMTAIAAHIHKGEVGVPGDVVFALGESP
                     LTSPINFTSPPLDATQEADLMNNLYYVNIHSDAFPGGEIRAQLTKQ"
     gene            1702..2253
                     /locus_tag="VEV83_22495"
     CDS             1702..2253
                     /locus_tag="VEV83_22495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47972.1"
                     /translation="MNQKLTGALALISVFVFDAVTAQIPAGNFHVVTGYDQIHSRSNF
                     YMPSFSLKSKPRLNDINLNAVRDFIRRYKMEATDAMWQITSHNDYVARFSVDSIDVIV
                     VYGKSGNWVSSVKRYSENRLPRDVRSVIKRLYADYSIAHADEVNVSEGKNTVYVITIE
                     NEQQIQILNFCNGEIEVKNSFSK"
     gene            2446..>3202
                     /locus_tag="VEV83_22500"
     CDS             2446..>3202
                     /locus_tag="VEV83_22500"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYK47973.1"
                     /translation="MTEQITKDDIKQEVFDLYDDYAHSRVSRRDFVEKLSLYAVGGLT
                     VASLMSFLMPDYKDAIQIKNDDPRLKSEYINYDSSKGGGNIKALLSMPSDAKEKLGGI
                     VVVHENRGLNPHIEDVARRAALAGFISLAPDALTPLGGYPGNDDAGRELQSKRDRNEM
                     LEDFTAGYQYLKNRKECNGKVGVVGFCFGGWIANMMAVRIPDLAAAVPFYGGQPASED
                     VPNIQAPLLLHYAGLDSNVNKGWPAYDSALKANG"
BASE COUNT          935 a          667 c          749 g          851 t
ORIGIN      
        1 tgaataaaac attcataaat ttgattagct gcaagcgcaa tgaagtttat gcaagatgat
       61 agatgatata catttccccg aaaaccttac cggccggcaa cttgatgaat atttaagcag
      121 aggatggttt cgcatgggtc aaaccatctt tacaacagat gtagttcctc taaacgatag
      181 cgtgtatgca gtgtactggt tgcgtatcga tctgcgccgg ttgaagtatg ggaaaaccca
      241 gaaaaaatta ttcgttctaa ataaaaactt tacggtcacc attcaaccgt taagtataaa
      301 ctccgagctg gaagatctct ttacattata ccggaccgcc gttgatttta ccccgcctca
      361 gtcagtggaa gaatatttgt tcctgggcat caatcaaaat atctacgaca cgtatttgat
      421 ccaaataaga gatcatggtc aattgatagc tgccggcatt ttcgacaacg gcgaaaccag
      481 cattgcgggt atcctgaact tttatgatcc ctcatacaag aaatatagtt taggtaaata
      541 cctgatgctg atcaaagcgg agcatgcaat aaaaatgggc aaggcctggt attatcctgg
      601 atacatagcg agcgggttca gtaaattcaa ctacaaactt tttccggata agcacgcgac
      661 cgaaatgtat gataaggatt caaaaacatg gttgcccgta aggttatttc cataagttaa
      721 gcgccccgaa aacggggcgc tccacacagc acaaaaactg gaactctcaa cattatcggc
      781 ggcaggcttt attgtttcgt tagctgagcc ctgatctctc cgccgggaaa agcgtcgctg
      841 tgtatgttta cgtaataaag attattcatc aggtcggcct cttgtgttgc gtctaaagga
      901 ggcgaagtga aattgatcgg cgaggtcaag gggctttcac cgagcgcaaa aacaacgtcg
      961 cccggaacgc caacctcacc tttatgaata tgtgcagcaa tggccgtcat accgctgtaa
     1021 gtcactgtgc cgcttaatat ccgcgtgctg ctgttataag aaaaatttgc ggttcccgtg
     1081 gctgtggagg cattggctgg cgtttcattt gcgccggata aagtgccgga gaaattggta
     1141 atcgtcggac ttgcattctc atcatccttg ttgcatgcat taaggatcgc aagggtgaac
     1201 aagagacatg cagcaaccaa aagtttgttt cgcatagtga tgttatttgt aggtttataa
     1261 aacaccaaac taaaaacgaa agaccactta tgctaacaga ggttgccaaa caggttcttt
     1321 tagctgccgg gcaggaaaaa attggggctg aaatttttcg cctcgatttt aaaggtgctc
     1381 aagctcttta aaagtgattg tacctgagac gcaaccttac cactgaatga gcgcccgtga
     1441 ataaaaaacc aatgcggctg ctctcaaaaa agccgttcat gagcatgaac taccccttat
     1501 gtagtttgtt tttgagttat cgcatccctg agcaaatttt gacaacttaa cgacatcgga
     1561 aattttgtat agatcctgcc cttagagatc cacgccgcag aaaaattaag ctcacagaga
     1621 ctatcgcaag aggtgctaaa tgaaaccagc aattgcagtt gcctgaaggc tcgttgctgc
     1681 caaaaatgaa aaaagaaaac tatgaatcag aagctaaccg gcgcgttggc attaatttca
     1741 gtatttgttt ttgatgctgt tactgcgcaa atacccgccg gcaattttca cgtggtgact
     1801 ggctacgatc aaattcacag tcgttccaat ttttacatgc cgtcgttctc cttgaaaagc
     1861 aagccccgat tgaatgatat aaatttaaac gcggtaagag attttatccg acgatataaa
     1921 atggaagcga ctgacgcgat gtggcaaata acgtcacata atgattacgt tgcccggttc
     1981 agtgtcgact caattgatgt catcgtcgtg tatggcaaaa gcggaaactg ggtttcgtcc
     2041 gtaaagcggt attctgaaaa tcgactgcca cgtgatgtaa gatcagttat caaacgatta
     2101 tatgctgact actcgattgc gcacgctgat gaggtgaacg tttctgaagg aaaaaatact
     2161 gtgtacgtta tcactattga aaacgaacag caaatacaaa ttttgaattt ttgtaatgga
     2221 gagatcgagg tgaaaaatag tttttcgaaa tgatggggtg agcaaataga ttcacgctta
     2281 cagacgccgg tactgaacga cgatcggcta attaacctgt caactgtctt acaaaatacg
     2341 tgtcgtctaa atgccgcccg cacaaagttg cggtcgggtt tttctgtttg ctcttaccac
     2401 tgttgtcttt cggaattgct atttttatgc cacaaagcga cttatatgac agagcagatc
     2461 acaaaagacg atatcaagca ggaagtgttt gatctatatg atgactatgc gcatagtcgc
     2521 gtaagccggc gagactttgt agagaaactg tcgctgtatg ctgtgggtgg actcaccgtt
     2581 gcttcgctga tgagttttct tatgccggat tacaaagacg cgattcaaat taagaacgac
     2641 gatccacgtt tgaaatcgga gtatatcaat tacgattctt caaagggcgg tggaaacatc
     2701 aaggccttgt tgtcaatgcc gtcagatgca aaagaaaagc ttggtggcat tgtagtcgtt
     2761 catgaaaatc gcggcttgaa tccgcatatt gaagacgttg cacggcgtgc tgcacttgcc
     2821 ggatttattt cacttgcgcc ggatgcattg accccgttag gaggctatcc gggtaatgat
     2881 gacgccgggc gtgaactgca aagcaaacgt gacaggaacg aaatgctgga agactttaca
     2941 gcgggatatc aatatctcaa aaacaggaaa gagtgcaacg gaaaagtagg tgttgttgga
     3001 ttttgctttg gcggatggat cgcgaatatg atggccgtac gcattcccga tcttgcggct
     3061 gctgtgcctt tttacggagg acaaccagct tccgaagatg ttcctaacat tcaagctccg
     3121 ctgctgcttc actatgcggg gctcgactca aatgtcaaca aaggctggcc ggcgtatgac
     3181 agtgctttaa aggcaaatgg ca
//
LOCUS       DASQJI010000869         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1530570,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000869 DASQJI010000000
VERSION     DASQJI010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530570"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VEV83_22505"
     CDS             <1..526
                     /locus_tag="VEV83_22505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47974.1"
                     /translation="GTPLTATGRGNATGRPNFGDAFSNFQVIYQYPNNVDVSIHTAKV
                     GPQFGDVCCRFIGTKGSAEAHYSGGVFIIGDNKWDSGIARTDAELTPQQQASGVFNSS
                     LHDADANKEQAFINSIETGNYLNETRSGAESTLTAILGRESATTKREMTWDEVYFSGE
                     RLDPKLNLSQFDKA"
     gene            622..1779
                     /locus_tag="VEV83_22510"
     CDS             622..1779
                     /locus_tag="VEV83_22510"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYK47975.1"
                     /translation="MRKTIHIKLLLFFFFHANAALVLCQQLYFPDSVWQTKEPGEVNM
                     NARLLDSAVTFAIQNESTTDYDLRIADLKAYANEPNYRILGPTKPRGKSAGIILKNGY
                     IVAQWGDVERVDMTFSVTKSYLSSIAGLAVDQRLIRSIDDPVNKYVWDDKFEGDHNKK
                     ITWRHLLTQSSDWSGCLFDICDWADRPPKEGNIDDWRNRKLVEPGTQFEYNDVRVNLL
                     AFSLLQVWRKALPVVLKEKIMDPIGASTTWRWYGYDNSFVNVDGTMIQSVSGGGHFGG
                     GLFISTLDQARYGLLYLRNGRWKDQQLISQQWVNAAHQPSAANRSYGLLWWTNDDNHL
                     KDISNRIYYADGFGGNFIVIDNEHDLVIAVRWLEPGKLNDFVKLVLSSIRK"
     gene            1952..>2119
                     /locus_tag="VEV83_22515"
     CDS             1952..>2119
                     /locus_tag="VEV83_22515"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HYK47976.1"
                     /translation="MNSIYSAVIAAFVFSATSWQTDFETAKTQARSENKLILLNFSGS
                     DWCGPCIRLHKE"
BASE COUNT          614 a          447 c          513 g          545 t
ORIGIN      
        1 gggaactccg ctcactgcga ccggaagagg caacgccacc gggcgtccga actttggtga
       61 tgcattcagc aatttccagg tgatctatca atacccaaac aacgttgatg ttagcataca
      121 cacagccaaa gtaggaccgc agttcggaga cgtgtgttgc aggttcattg gtacaaaggg
      181 cagcgctgaa gcgcactata gcggcggtgt gtttattatt ggcgacaaca aatgggattc
      241 aggtattgca agaacggatg ctgaactcac accgcaacaa caagcgtccg gtgttttcaa
      301 ttcatcgctg catgatgctg atgcgaataa agagcaggcc tttatcaaca gcatagaaac
      361 aggtaattac ctgaatgaga cgcggtcagg agcggagtca acacttaccg caatactggg
      421 acgagaatca gcaacgacga aaagggagat gacgtgggac gaagtttatt tttccggtga
      481 aagattagat ccgaagttga atctttctca atttgataaa gcttgaagag acgaaccgac
      541 gggcgaggtg ttttaaatcg gtcagacgct tcgaaagcgt cagacggatc ccgcaaactt
      601 tttcctgtta aacacattac gatgagaaag acgattcata tcaaactgct gttgttcttt
      661 tttttccacg caaatgcagc actcgttctc tgccagcaac tttacttccc cgactccgtt
      721 tggcaaacca aagaaccagg cgaggtaaac atgaatgctc ggctacttga cagtgctgta
      781 acatttgcga ttcaaaatga aagcacgaca gactacgatc tgcgaatagc cgatttgaag
      841 gcgtatgcaa acgaaccaaa ctacaggatc ctcggaccaa caaaaccgcg cggaaaatct
      901 gcaggaatta ttttgaagaa tggttacatc gtcgcgcaat ggggagatgt ggagcgtgtg
      961 gacatgacgt tcagcgttac gaaaagttac ttgtcttcaa ttgctggcct cgcggttgat
     1021 cagcgtctga tcagaagtat tgatgatcct gtgaacaaat atgtgtggga cgataagttt
     1081 gaaggagatc acaataagaa gatcacgtgg aggcatttgc tgacgcaatc atccgattgg
     1141 tccggatgtc tttttgatat ttgcgactgg gctgatcgtc ctccgaaaga aggcaacatt
     1201 gatgattgga gaaaccgaaa acttgttgaa ccgggaacac aatttgaata caatgatgta
     1261 cgcgtaaacc tgcttgcatt ttctttattg caggtttggc gaaaagctct tcccgttgtt
     1321 ttaaaagaaa agatcatgga cccgatcggc gcatcgacaa catggcgctg gtatggttac
     1381 gacaattctt tcgtaaacgt cgacggaaca atgatccaat ccgtaagcgg cggaggtcat
     1441 ttcggcggcg gattgttcat cagcacgctt gaccaggcga gatatgggct tctttactta
     1501 aggaatggca gatggaaaga tcaacaactt atttcgcagc aatgggtgaa cgcagcgcat
     1561 cagccctcag cggcgaacag atcgtacgga ttgttgtggt ggacgaatga tgacaaccat
     1621 ttgaaagata tttctaacag gatctattat gcagatggtt ttggtggcaa ctttattgtg
     1681 atagataatg aacatgacct tgtgatagct gtaagatggc tcgaacctgg aaaactcaac
     1741 gactttgtga aacttgtgct cagctcgatc cgtaaatagc tgattccctt gtagcagcac
     1801 ccatgacgtt tggaaggttt taactttaat caacggaaat tgctaagatt aaactaaaag
     1861 agcggcattt ccagtgccgg tcactcttta aaacaatctc tcttcataag ttgcgttctt
     1921 aatattcccc cggaattttt tatccatgtt tatgaactca atttattcgg cagtaatagc
     1981 tgccttcgta ttttctgcca cgagctggca aactgatttt gaaacagcaa aaacacaggc
     2041 acgatcagaa aataaattga tccttttgaa tttttccggg tctgactggt gcggtccgtg
     2101 catccgcctg cataaagaa
//
LOCUS       DASQJI010000870         4949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1220860,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000870 DASQJI010000000
VERSION     DASQJI010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220860"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VEV83_22520"
     CDS             <1..378
                     /locus_tag="VEV83_22520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HYK47977.1"
                     /translation="LELHGDSFTIKRSKMPKAPGIGGWDSLDTYPKAMQKELLDAYNQ
                     KWSPAQQQAPTLKDITYAAPENYNEHYEHLLNFFNSVRTGAPVVEDATFGFRAAGPCL
                     ACNESYFQNKVIYWDPEKIRTVG"
     gene            744..1073
                     /locus_tag="VEV83_22525"
     CDS             744..1073
                     /locus_tag="VEV83_22525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47978.1"
                     /translation="MWSTGTLWFEVAIVSIIYAAGNILFGHFEERTPKWRRMGKYILT
                     LIIIITLSVYFGRAVAMLLLAAFLPPLLYIHGYYLPKKKGINGWTGEPKSRYYDLRKW
                     DKNIFKE"
     gene            1160..2620
                     /locus_tag="VEV83_22530"
     CDS             1160..2620
                     /locus_tag="VEV83_22530"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYK47979.1"
                     /translation="MKKAIFTLLILLIKASCLPQKVPARFDLQKLHWCTPNGISDSVL
                     CGFCPVPENRQTNKGRTINLNIVVIPAARSDSLLAPIFDIDGGPGAADTKSVWFYADP
                     KNPYHQHHDIVLVDVRGTGQSNPLNCYSLQYKASLDEQFDDMYPPDKVKQCYDELSKI
                     ADLTQYTTTNIVKDFEDVRQWLGYKKIELFSLSYGTRVALVYMKLFPASIRACVLWSP
                     IPTYGKMPMYHAVTAQKTLERLFAACKNDPDCDATFPDFEKEFYTLMNAWFGRSVVVK
                     HIDSFNIVHEIPISWDGFETGLRQLMYSPAGLRQIPYIIHQCYLNNFEPVLSYYPQGS
                     DTSKFIAEGLYLCVTCAEDVPFIKSPKKKGLDSLTHHTFMGSYRIDQQKAACKNWVQG
                     EIPGNFLDTIHSEIPTLIFSGSYDPVTPTWMAAEIASHLPHSTLVTIPEMSHIFDGLN
                     NIDCFDHIAVDFLNNPFSSVNYDCVKTMTPPPFKLK"
     gene            complement(2757..3677)
                     /locus_tag="VEV83_22535"
     CDS             complement(2757..3677)
                     /locus_tag="VEV83_22535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018617266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYK47980.1"
                     /translation="MIQTLDILQAAHSNTIDSRISLLGMKEHYIPGSARYVMRRYEMP
                     ASWNAEDKGMLVYHFNKTNPEENFFELRFCISGNKYCSEENCGICKEMPGDTCKTHDS
                     LDVFSFHFTSTFLYQFVHNVKLTDRKDEVLAFKHPFSFHKIFPVCSRKRMVLDALLNH
                     GYGGATENIYTNAKVHELLLYSIECLIDEKVDGFACKFLADESGRDRIYQAREILLEN
                     IGSPITIKALSRKVAMNECYLKKGFKEIFGTTIFDFYQQQRMEHAKYLLYEKNLSVTD
                     VSDILGYSSISHFSAAFKKHTGLKPCELLR"
     gene            complement(3748..4341)
                     /gene="hisIE"
                     /locus_tag="VEV83_22540"
     CDS             complement(3748..4341)
                     /gene="hisIE"
                     /locus_tag="VEV83_22540"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HYK47981.1"
                     /translation="MRPDFDKYADKLVPAIIQDAATSTVLMLGYMNDEAYDRTIANNK
                     VTFYSRSKNRLWEKGETSGNYLFVKEILLDCDHDCLLIKAEPAGPVCHTGADTCFNET
                     NQGNFLTYLQKVIEQRKAGNDPKSHVSSLFKKGINKIAQKVGEEAVELVIEAKDENDE
                     LFKNEAADLLFHYLILLRAKGFWLADIEDVLKQRHKK"
     gene            complement(4338..>4949)
                     /locus_tag="VEV83_22545"
     CDS             complement(4338..>4949)
                     /locus_tag="VEV83_22545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase cyclase
                     subunit"
                     /protein_id="HYK47982.1"
                     /translation="VFLDITATHEKRKTLTELVTRVAERINIPFTVGGGISSSDDVKA
                     LLDAGADKISVNTAAVKNPGLIEELAAQFGSQCIVLAVDAKLENNTWFVYLNGGRIPT
                     DLPAIDWIKRAIEAGAGEILLTSIDHDGTKQGFANELIKEVESFSSVPVIASGGAGTM
                     QHFADVFEAGADAALAASLFHFKEMDIIDLKRFLKTKNIHVRL"
BASE COUNT         1339 a         1126 c         1092 g         1392 t
ORIGIN      
        1 ctggaacttc atggcgatag tttcacaatt aaaagaagta aaatgccaaa ggctccgggt
       61 attggcggat gggattctct tgatacttat ccaaaggcga tgcaaaaaga attactggat
      121 gcttacaatc aaaagtggtc accggcgcag cagcaggcgc ccacattaaa agatattact
      181 tatgctgccc cggaaaatta caacgagcac tatgagcacc tcttaaattt tttcaacagc
      241 gtcaggacag gcgcgccggt tgtagaagac gcgacgtttg gctttcgtgc ggcagggcca
      301 tgtttagcgt gcaacgaaag ttattttcaa aacaaggtta tttactggga tccggaaaaa
      361 ataagaacag tcggctgagg aaggaaatgg ggaattggca attaggattt aggatttagg
      421 attgagatct tccgtgatta taaagagcca acaacttcaa aacgatttgg gggctttcgg
      481 gttcggcatt cttgatcggc ttcggtcccg gctgctacgg gcttcgctcg cgctccggtg
      541 ctgcgtttta ctgcgcacca ggcccttcgc atccggcagc cattcagcga tagaattcag
      601 tcagcatttg cagtcgttac agccatcaca cactactcaa tatgcttgct taatttcgca
      661 agggtgtttg ccttcgcgcg ccatgcggaa atcaagaaac tgcctaatta tttttacctt
      721 caacataaca aaagctttgc gctatgtggt caaccggaac actttggttt gaagtggcca
      781 tcgtaagcat aatttatgcg gccggaaata ttttgtttgg ccactttgaa gaaagaacac
      841 caaagtggag gcggatgggt aaatatattc ttaccctgat catcataata acactttcgg
      901 tctacttcgg gcgcgcagtg gccatgctcc tcctcgccgc atttttgccg ccgcttctgt
      961 atattcacgg atactatttg ccgaagaaaa aaggtataaa tggatggact ggcgagccga
     1021 agagcaggta ttacgatctc cgcaaatggg ataaaaacat tttcaaggaa taggcatccc
     1081 gggcggagta aggaaacgac agctgagaat tgacttttga catcagtcaa tttcattaaa
     1141 cgcttaattc catcagcata tgaaaaaggc gatcttcacc ctgcttattt tgctgatcaa
     1201 agcatcatgt ctgccgcaaa aggttcctgc aagatttgat cttcaaaaac tgcactggtg
     1261 cacaccgaat ggcatctcag attctgtgtt atgcggcttt tgcccggtgc cggaaaaccg
     1321 gcaaacaaat aaaggcagga caattaattt gaatatagtt gtaattcctg ctgcccgttc
     1381 tgattcttta ctcgcaccaa tattcgatat tgatggcggc cccggcgctg ccgacacaaa
     1441 gagcgtctgg ttttatgcag atcctaaaaa tccgtatcac cagcaccacg acattgtttt
     1501 ggttgatgtg cgcggtactg ggcaatcaaa tcctttgaat tgctattcgc tgcaatataa
     1561 ggcttcgctc gacgaacagt ttgatgacat gtatccgcct gacaaggtaa agcagtgcta
     1621 tgatgaactc tccaagatcg ccgacctcac acagtacacc actacaaata ttgtaaaaga
     1681 tttcgaagat gtgcggcaat ggcttggcta caaaaagatc gaattattta gtttatctta
     1741 tggcacccgg gtcgcgcttg tctacatgaa attgtttcct gcgtcaatac gggcatgtgt
     1801 gttatggtcg cccataccaa catatggcaa gatgcccatg taccatgcag taacggcgca
     1861 aaaaacactc gagcgtttgt ttgcagcgtg taaaaatgat ccggactgcg atgcaacgtt
     1921 cccggatttc gagaaagaat tttatacgct gatgaacgct tggtttggca gatcggtagt
     1981 tgtaaagcat atcgattcat tcaacattgt gcatgaaatt ccaatttcct gggatggatt
     2041 tgaaacaggg ttaaggcagc tgatgtattc gcccgcaggc ttaaggcaaa tcccttatat
     2101 tattcatcaa tgttacctga acaatttcga acctgttcta tcgtattatc cgcagggaag
     2161 tgatacaagc aagttcattg ctgaaggact ctatttgtgc gttacatgcg ctgaagatgt
     2221 tccatttatt aaaagcccta aaaagaaagg actcgattcg ctaactcacc atacattcat
     2281 gggctcatac cgcatcgatc agcaaaaggc cgcatgcaaa aactgggtgc agggagagat
     2341 ccccggtaac ttcctcgaca caattcattc tgaaattcct acgttgatct tttcaggcag
     2401 ctatgacccc gttacgccga catggatggc ggcggagatt gcaagccatc tgccacacag
     2461 cacgctggtg accattcctg agatgtccca cattttcgac gggctgaaca atatcgattg
     2521 cttcgaccac attgccgttg attttttgaa taatccgttt agtagtgtaa actacgattg
     2581 cgtaaagacg atgacaccgc cgccatttaa gttgaaataa ttaagaatgg atgcgattga
     2641 agatttgtta gcgaaaaacc gcgggggtga ctttcaccgg ttaggacgat actacacctt
     2701 ttagacacaa accttgaatt gctgacaaca tcaaacctca aacttcaaac gattttttat
     2761 cgaagtaatt cacacggttt caaacctgtg tgtttcttga acgctgcaga aaagtgagag
     2821 atggaggaat aacctagtat atctgagaca tcggttacgc ttaggttttt ttcgtacaaa
     2881 agatattttg catgctccat cctttgctgc tggtagaaat caaagatggt ggtcccgaat
     2941 atttctttaa atcctttctt caaatagcac tcattcatcg cgaccttacg gctaagtgct
     3001 tttatggtaa tagggctacc gatgttttcc agtaagatct cgcgcgcctg gtagatgcgg
     3061 tcgcggccgg attcatcggc caaaaattta cacgcaaagc cgtcgacttt ttcatcgatc
     3121 aagcattcaa tactgtacaa cagcagttca tgcacttttg cgttggtgta aatattttcg
     3181 gtggcgccac catagccgtg attcaacagc gcgtcaagca ccattcgttt ccggctgcaa
     3241 accgggaata ttttatggaa tgaaaaagga tgtttaaatg caagcacttc gtctttgcga
     3301 tccgtaagtt ttacattatg aacaaactgg taaagaaacg tggaggtgaa atgaaatgaa
     3361 aaaacatcga gtgaatcgtg ggttttgcac gtatccccgg gcatttcttt gcagatcccg
     3421 caattttcct ctgaacaata cttattaccg gaaatgcaga aacggagttc aaagaaattt
     3481 tcctccgggt tggttttatt aaagtgataa accaacatcc ctttatcttc cgcattccac
     3541 gacgccggca tttcgtacct gcgcatcaca tagcgcgccg aaccgggaat gtagtgctct
     3601 ttcatcccga gcaatgatat cctggaatca atggtgtttg aatgcgcagc ttgtaatatg
     3661 tccaacgttt ggatcatcac cggcaaatgt acgcggaaat gaggcaatga tctatatgga
     3721 ccggggtgcc ggggaacagc tttaagatta ttttttatgt cgttgtttca aaacgtcttc
     3781 aatatctgcg agccaaaagc cttttgcgcg taacaaaatg aggtaatgga acaacaggtc
     3841 agcagcttcg tttttaaaaa gttcgtcgtt ttcatctttt gcttcgatca ccagttcaac
     3901 cgcctcttcc cctactttct gcgcgatctt gttgattcct tttttgaata aagagcttac
     3961 atgggatttc ggatcattgc ctgcctttcg ttgctcgatc actttttgca ggtaagtgag
     4021 gaagttgcct tgatttgttt cattaaagca cgtatcggcg ccggtatggc aaacaggacc
     4081 cgccggttcc gctttaatta aaaggcagtc gtggtcgcaa tccaataaga tctctttcac
     4141 aaagagataa tttcctgaag tttcaccttt ttcccataac ctgtttttcg agcgactata
     4201 aaacgtgact ttattattgg cgattgttct atcgtaagct tcatcattca tataaccaag
     4261 catcagaacc gtagatgtgg ccgcatcctg gatgatcgcc ggaacaagct tatcggcata
     4321 tttgtcaaaa tctggtctca taacctcaca tgaatattct ttgtttttaa aaatcttttc
     4381 agatcgatta tatccatttc tttgaaatga aacaaactgg cggccaacgc cgcatctgcg
     4441 cccgcttcaa aaacatctgc gaagtgctgc atcgttccgg ccccaccact ggcaataacg
     4501 ggtacagatg agaatgattc aacttctttg atcaactcgt ttgcaaagcc ctgttttgtc
     4561 ccatcgtgat cgatggaggt aagcaggatc tctcctgcgc ctgcctctat ggcccttttg
     4621 atccagtcga ttgccgggag gtcagtcgga attcgtccgc cgtttagata gacaaaccaa
     4681 gtgttgtttt cgagttttgc atcaacggcc aaaacgatgc attgacttcc aaattgtgcc
     4741 gccagctctt cgatcaggcc tgggtttttt acagccgcag tgttcacgga aatcttatca
     4801 gcacctgcat cgagcaacgc ctttacatcg tctgaactgc tgatgccgcc accgaccgta
     4861 aacggaatat tgatgcgctc cgcaactctc gtcacaagct ctgtcagcgt ttttcttttt
     4921 tcgtgcgttg cagttatatc aagaaatac
//
LOCUS       DASQJI010000871         4897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_760926,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000871 DASQJI010000000
VERSION     DASQJI010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4897
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760926"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(543..1277)
                     /locus_tag="VEV83_22550"
     CDS             complement(543..1277)
                     /locus_tag="VEV83_22550"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HYK47983.1"
                     /translation="MRTLKLFAIMLLGSLAGTAQTTTVDHFTKVIVSPYIQVTLVEGE
                     EESVTINDIRVDENKLHIEVNNETLRIYLEGAKDIPKYETDYSSGHRDSHALYDNTSV
                     VATVTYKRLTALSFRGAEKHLCESPINASKFSLTIYGESEVTFNELNAQEMETTIYGE
                     ASLNIKAGAVQEQRYTCYGESHVNTLAIAGNTSRIVAFGEADLRINVSDRIKITAYGE
                     AKLHYKGEPEIVKGLHFGEMQIDKID"
     gene            1554..1856
                     /locus_tag="VEV83_22555"
     CDS             1554..1856
                     /locus_tag="VEV83_22555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47984.1"
                     /translation="MDFQLVAGKPDATDHLVFTTTFMHNNIFYKAALAETIRWDGQLT
                     GTYDVLLQSDKGTQRLTLVKNWDGQDWRAGDEIEQIGIVSQDVVNLLAAVIKEVRR"
     gene            complement(1902..2681)
                     /locus_tag="VEV83_22560"
     CDS             complement(1902..2681)
                     /locus_tag="VEV83_22560"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYK47985.1"
                     /translation="MKLQRSFIIFFVISLTCVHIAFSQASSSRFSSNVYVTSKGDSLR
                     YRLLYPDSDTLRKYPLVIFLHGSGERGNDNEAQLKWGVMNFATDQMMAMHPALVVAPQ
                     CPEKMSWSNLSRSKITSDTRLLPDASKPMQLVIELIHALEKSMPVDTNRIYITGLSMG
                     GFGTYDAIERYPDLFAAAMPVCGGGDVSKASVIAHIPIWNFHGAEDPAVDPQYSVDML
                     NALFKAGAHPAFTFYPETGHFSWIAAYSDPLAMEWLFRQHK"
     gene            2924..4108
                     /locus_tag="VEV83_22565"
     CDS             2924..4108
                     /locus_tag="VEV83_22565"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008583024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HYK47986.1"
                     /translation="MDQSSSAFKDSKKHYQILDGLRGVAAVMVVMLHILETFTNGDHS
                     KQIINHGYLAVDFFFVLSGFVIGYAYDDRWHKMTLKDFFKRRLIRLHPMIIAGMVIGA
                     ITFYFQAGPVWPGISEVPAWKFFVVMLIGFTLLPVPLSMDIRGWGEMHPLNGPAWTLF
                     FEYIANISYALFVRKFSNTLLAILVFIAGCALIQLAVTSPQGDLIGGWSIEPHQLRIG
                     FTRLLYPFFAGLLLSRVVKPTQLKHAFLLCSLLLIIVFAIPRIGDSDHLWMNGLYDSL
                     SIVLVFPVIVYLGASGEMTGGFVSKICKFLGDISYPLYIIHYPFIYLFMTWVSKNQDF
                     LTGPSTAAPIVLVLVAVSVLAVAISVAYACLKLYDEPVRKWLTKRFMPVTKNRAKEKT
                     NA"
     gene            4211..>4897
                     /locus_tag="VEV83_22570"
     CDS             4211..>4897
                     /locus_tag="VEV83_22570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HYK47987.1"
                     /translation="MQFDPKDLQNEQLVHFYRSLLLPRMIEEKMLVLLRQGRISKWFS
                     GIGQEAIAVGATLALQDDEWIMPLHRNLGVFTTRNMPLHKLFMQWQGSKDGYSKGRER
                     SFHFGNRQHHICGMISHLGPQLAIADGVALAHKLKRENKISLAFTGEGGTSEGDFHEA
                     LNVAAVWDLPVVFLIENNGYGLSTPVNEQYRCENLTDRAKGYGMDGVQIDGNNILAVY
                     DTIKGVREYCI"
BASE COUNT         1321 a         1064 c         1136 g         1376 t
ORIGIN      
        1 ttaaactggc tcttctacag aatggttgca tcgaaagaag ggaaattcgg caagcatgaa
       61 tttgttgtgc taaaaccgga aaaaggcgta ctgaaatcga tatgatacca tcataccggg
      121 aaggttggat acctgcgaaa cggtgcgact gttagctcac cttggctctc gtcttgggca
      181 tagaaactat ttgcggcgtg ttttggaata aaagacatgg agcacgaagt tcacaatgaa
      241 ccacgaagaa ccaacgactg ctcggtgttt tcaaaattaa tttctcccaa tcatgcataa
      301 gagttgtgaa aggaagagac gtcttataaa attataggcg agctctgatt attgtgtatt
      361 ttcgaacggg aagtaagtgt atggcacacg gatgacacag atgccacgga tttcgatgga
      421 tatttttcag tttttcaaag actattttag ggctactaat tcaagcaaca gagaaaatcc
      481 cgtgtcgatc cgtgcccgaa ggccgtgtga tccgtgttct aactattcat gcaggtcatc
      541 agttaatcaa ttttatcaat ttgcatttcg ccaaaatgaa ggccttttac aatttcaggt
      601 tctcctttgt aatgcagttt tgcttcgcca taagcggtga tcttgatcct gtctgaaaca
      661 ttgatgcgca gatctgcttc gccaaaagca actatgcggc tggtattgcc tgcgatcgcc
      721 agcgtattta catgactttc gccataacag gtgtatcgtt gttcttgtac agctccggct
      781 tttatgttca gcgacgcctc gccgtaaata gtcgtttcca tttcctgtgc attcaactca
      841 ttaaaagtta cctctgattc gccgtatata gtgagcgaga atttcgaagc attgataggc
      901 gattcacaaa ggtgcttctc tgcgccgcga aatgaaagag ctgtcaatct cttatatgtg
      961 actgtggcaa cgacagaagt attgtcgtac agcgcgtgcg agtccctatg cccgcttgag
     1021 taatctgttt cgtatttcgg tatgtctttc gctccttcga ggtagatgcg cagcgtttcg
     1081 ttatttactt ctatatgcag tttgttctcg tcaactcgaa tatcgttgat agttacgctc
     1141 tcttcttcac cttcaacaag tgtaacctgt atataaggac ttacaattac tttggtgaaa
     1201 tggtcgactg ttgtggtttg agcggttcca gcaaggctgc caagcagcat aattgcaaaa
     1261 agtttcagcg ttcgcatgtg caaaatttga ataatgaaat agatagtgta aaagctttgc
     1321 cttgtaatac gacggacgtg tgtttatgtt acaggccttt cccggtttat tttttcgaat
     1381 gacgagcggc gaattcggcg caggctccga tgcaacaatt cgctgcaagc gatgacatca
     1441 attttttacg tcgaaaaaaa agaactattg aacacggata ttaaaatgta cgtcgaatac
     1501 ttacccaaag gcaaaaatgt tttttgtaaa ttactatcca aacgaagacc aatatggact
     1561 ttcaacttgt cgctggcaag ccagacgcaa cggaccacct ggtttttacc acaactttca
     1621 tgcataacaa tattttttac aaagctgctc ttgccgaaac gattcgttgg gatggccagc
     1681 tcaccggaac ttacgacgta ctgcttcagt cagataaagg cacgcagcgt cttaccctcg
     1741 taaaaaactg ggatggacaa gattggagag cgggagacga gatcgagcag attggaatcg
     1801 tatcgcaaga cgtagtgaac ttgcttgctg ccgttattaa agaagtgcgc agataagttg
     1861 caatacttga tcaacaccag accgtgctga tcgatcacaa atcatttgtg ttgccgaaac
     1921 agccattcca ttgcaagcgg atcgctgtac gcagctatcc atgaaaagtg tccagtctcg
     1981 ggatagaatg taaacgctgg atgagcgccc gctttgaata acgcattcag catatcgacc
     2041 gaatattgcg gatcgactgc cggatcttct gctccatgaa aattccagat gggaatatgc
     2101 gcaataaccg aagcttttga tacgtcgcct ccaccgcaaa caggcatagc cgctgcaaac
     2161 aggtcgggat aacgttctat cgcatcgtaa gtgccaaagc cacccatcga aagaccggtg
     2221 atatagatcc tgttcgtatc aacgggcata cttttttcta atgcatgaat tagttcaata
     2281 acaagttgca tgggctttga tgcatcaggc aacaaccggg tatcgctggt gatcttgctg
     2341 cgtgaaagat ttgaccagct cattttttcg gggcattgcg gcgctacaac gagcgcggga
     2401 tgcatagcca tcatttgatc agttgcaaaa ttcatcactc cccattttaa ctgtgcttca
     2461 ttgtcgtttc ccctttcacc cgagccatgc aaaaaaatga ccagcggata ttttcgcaga
     2521 gtgtcggaat caggataaag caagcgatac ctgagcgaat cacccttgct ggttacgtat
     2581 acattggaac tgaaacggga agacgatgct tgtgaaaacg cgatgtggac acaagtaaga
     2641 gatattacaa agaagataat gaacgaacgt tgcaatttca taatggctga ttttattagt
     2701 acacttttta atgaatgaaa ataaggtaaa agatgaacta attcttgaac gcgaaaaaca
     2761 aagtgcagac aggctgctac ttcgctggtt cttcattcgc tatcgacgcg caagagtgct
     2821 aaccacatcc cggcagtggc ccgtggtgct aagaaatatt aataaatgtc acgacgctgg
     2881 aaccgcatca cattacattt gcacggaatt ttaaaagccg acgatggatc aaagctcttc
     2941 tgcattcaaa gacagtaaaa aacattatca aatattggat ggattacgtg gcgtggctgc
     3001 tgtaatggtc gttatgttgc atattctgga gacattcacc aacggcgatc attcaaagca
     3061 gatcataaac catggatacc tggctgtgga ttttttcttt gttctgtccg gctttgttat
     3121 cggttatgct tatgatgacc gctggcacaa aatgacattg aaggatttct ttaagcgaag
     3181 gttgattcga ctgcacccga tgatcatcgc aggcatggtg atcggcgcaa tcactttcta
     3241 tttccaggcc ggacccgttt ggccgggaat cagtgaagtg ccggcgtgga aattttttgt
     3301 cgtgatgctg atcggcttca ccttgcttcc ggttccgttg tctatggaca ttaggggttg
     3361 gggcgagatg cacccgctta atggtccggc atggactctt ttttttgaat acattgccaa
     3421 catttcttat gcactgttcg ttcggaaatt ttcgaacact ttgttggcaa tccttgtctt
     3481 cattgccggc tgcgctctta tacaacttgc cgttacaagc ccgcagggag atctcatcgg
     3541 cggctggtct atagaaccac accaattacg tattggtttt acgcgattgc tgtatccttt
     3601 cttcgccggc ctgttgcttt cgcgcgttgt aaaaccgact caactgaagc atgcgtttct
     3661 gttatgcagc ctgttattaa ttattgtctt cgccatacca agaatcggag acagcgatca
     3721 tttgtggatg aatgggcttt acgattcttt atcgatcgta ctcgtttttc cagtcattgt
     3781 ttacctgggt gccagtggcg aaatgacagg cggatttgtt tcgaaaatat gtaaattcct
     3841 cggcgatatc tcctacccgt tatacattat tcactacccg ttcatctacc tgttcatgac
     3901 atgggtttca aagaaccagg atttcttgac cgggccttca actgccgcgc ctatcgttct
     3961 cgtacttgtt gcggtaagtg ttctcgccgt agcgatttcg gtggcttatg catgtttgaa
     4021 actatacgat gagcccgtga gaaagtggtt gacaaaacgt tttatgccgg taacaaaaaa
     4081 tcgggcaaaa gaaaaaacta atgcatgacc agcagagctt tcgcgttttg aaaccgtcaa
     4141 ccgtcatctg tcaacttcag acgtcaaacc tcaaacctca aacaaacttt gctgcttacc
     4201 ttcgcgccgt atgcaatttg atccgaagga tttacaaaac gaacagcttg tacattttta
     4261 ccgcagcttg ctattgccgc ggatgatcga agaaaaaatg ctggtgcttt tgcggcaggg
     4321 acgcatttca aaatggttta gcgggatagg gcaggaggcg atcgccgtgg gtgcaacact
     4381 tgctttgcag gacgatgaat ggattatgcc gctccaccga aatctcggcg tatttacgac
     4441 gcgcaacatg ccgttacaca aattattcat gcaatggcaa ggcagcaaag acggttatag
     4501 caaaggccgg gaacgcagct ttcattttgg gaacaggcag catcatatct gcggaatgat
     4561 ctctcatttg ggtccgcagt tggcaatcgc ggatggagtt gcccttgcac ataaattaaa
     4621 aagagaaaat aagatctcgc ttgcatttac cggcgaaggt ggtaccagcg aaggtgattt
     4681 tcatgaagcg ctcaacgtgg ctgccgtgtg ggatctgcct gttgtatttt taattgagaa
     4741 taatggctat ggattaagca caccggtaaa tgaacaatac cgttgtgaaa atctgactga
     4801 tcgcgcaaag ggatatggta tggacggcgt gcagatcgat gggaacaaca tacttgccgt
     4861 ttacgatacc atcaagggcg ttcgcgaata ctgtatc
//
LOCUS       DASQJI010000872         3539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1837826,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000872 DASQJI010000000
VERSION     DASQJI010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837826"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            236..628
                     /locus_tag="VEV83_22575"
     CDS             236..628
                     /locus_tag="VEV83_22575"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYK47988.1"
                     /translation="MKTKKFIRSNAQLPVKSLRETLDYYRDTLGFVDEWTYKDAHGEI
                     KDGGIRRDELRLLFAEDPEFASAINNEKHRLPLMWFVEDVEEVYSEFRRRGIQIADPL
                     GTHPYGLKEFAFIDINGYYVRVAQGKAE"
     gene            complement(651..1286)
                     /locus_tag="VEV83_22580"
     CDS             complement(651..1286)
                     /locus_tag="VEV83_22580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HYK47989.1"
                     /translation="MAKQKKPKHIAVAGNIGAGKTTLTELLSKHYRWIPQFEDIDHNP
                     YLMDFYEDMPRWSFNLQIYFLNGRLNQLLDIQRGSETVIQDRTIYEDAHIFAPNLHDM
                     GLMNKRDYDNYFSLFQTLQSMVQPPDLVIYLKASVPTLVGQIQKRGREYEENIRLDYL
                     KKLNELYNRWIDHYKEGPVLVVDIDKNKFPENEEDLGEIIGKIDAMLFGLF"
     gene            complement(1387..2388)
                     /gene="trpS"
                     /locus_tag="VEV83_22585"
     CDS             complement(1387..2388)
                     /gene="trpS"
                     /locus_tag="VEV83_22585"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HYK47990.1"
                     /translation="MAKEIVLSGIRPTGFLHLGNYFGAVKNWARMQDEYDCYFCVVDW
                     HSLTTHPDTKELRQNVHRMISELLAAGLDPDRSVIYVQSDIPEIAELYLYFNTLAYKG
                     ELEKTSTFKEKVRQQPDNANAGLLTYPVLQAADILIHRAVKVPVGKDQEQHLEMSRNF
                     AQRFNYRYGDIFPLPYAFNYGSELTKILSLDGNGKMSKSQNQMATIYLVDDDDMIRKK
                     IMKAKTDSGPTEKGTPKPDYIENLFLLMQLVSDYTVVAKYETDYENCSIRYGDMKKQL
                     AEDMVAFIAPLREKAAAIQSDKAYLSNVIRQGREKGRASAAKTIKLVREAMQFDFDK"
     gene            complement(2455..3210)
                     /locus_tag="VEV83_22590"
     CDS             complement(2455..3210)
                     /locus_tag="VEV83_22590"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HYK47991.1"
                     /translation="MAKYILILGVLLFAQSNLFSQNISPIDTDRPDQTESPVTLPKHY
                     FQMETGFSFEQTNAETKTFAHPSVLFKYGVTGRFDLRLVTEFITVKNSIEDATGFNPV
                     AVGFKMNIVKEKGILPTTSLLGLLALPRFASKDFIGSRYAPGFRLAMQNTISEKVDLG
                     YNVGAEWDDESGKPEFIYTVTTGYSASEKVSAFVEIFGFAPQYAPAYHSFDCGLTYLI
                     KQNMSADISGGFGITENAPGYFLALGFSFRLPR"
     gene            complement(3253..>3539)
                     /locus_tag="VEV83_22595"
     CDS             complement(3253..>3539)
                     /locus_tag="VEV83_22595"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014218839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HYK47992.1"
                     /translation="LEESGCFAVVLEKIPAQLAKEVTESLSIPTIGIGAGKYCDGQVL
                     VMHDMLGINTEFKPRFLRQYLNIYEQVTEAVHRYVSDVKSKDFPTDRESY"
BASE COUNT          946 a          769 c          769 g         1055 t
ORIGIN      
        1 tgaagctcac agataatcat ttttacttta tgcttctcgg agaactctat accggtattg
       61 ataatgaaaa ggcaagagac catttcgaag cagctttgtc attagcaaaa acaaatacgg
      121 acaggcaaac gatcatgaaa acattgaccc gatttgagtg agggaataat tggcgttcta
      181 cccaactgat acgattttta tttctttgct tattatttga cagttatcag cagtcatgaa
      241 aacgaaaaaa tttatcagga gtaacgcgca actcccagtc aaaagcttgc gagagacatt
      301 ggattactat cgggacacat taggcttcgt tgatgagtgg acttataaag acgctcatgg
      361 cgagatcaaa gacggaggca taaggcgcga tgaactacgg ctcctttttg cagaagatcc
      421 ggaatttgca agcgcaatta acaatgaaaa gcatcgcttg ccattaatgt ggttcgtcga
      481 agatgtagaa gaagtgtatt cggaattccg acgaagggga attcaaattg cagatccatt
      541 aggcactcat ccgtatggtc tgaaggagtt tgcgtttatt gacattaacg gctactatgt
      601 gcgggtggcg caaggaaagg cggaatgatt atttcacaag aaagcgaagg ctaaaaaagg
      661 ccaaacaaca tcgcgtcaat tttaccgatg atctctccaa ggtcttcttc gttctcagga
      721 aatttatttt tatcaatgtc aaccacaaga acagggcctt ctttataatg gtcgatccac
      781 cggttgtaca gctcgttcaa tttttttaaa taatcaagcc gaatattttc ttcgtattcc
      841 cttccacgtt tttgaatttg tccgacaagc gtaggaaccg aagctttcag gtagatcaca
      901 aggtcgggtg gttgaaccat cgactgtagt gtttgaaaca aactaaaata attgtcgtag
      961 tcgcgtttgt tcattaaacc catgtcgtgc aaattcggtg cgaagatgtg ggcgtcttcg
     1021 tagatcgttc tgtcttgtat tacggtttcg cttccgcgtt gaatgtcgag cagttgattc
     1081 aggcgtccat tcaaaaagta aatttgaaga ttgaagctcc agcgcggcat gtcttcatag
     1141 aaatccatca ggtaaggatt gtgatcaata tcttcaaact gtgggatcca gcgatagtgc
     1201 ttgctcagta actccgttaa cgtggtttta cctgcaccta tatttcctgc aaccgctata
     1261 tgttttggtt ttttctgttt cgccatgacg cgctgattat atgagagttt acgattgcaa
     1321 ttctttcggc taaaaatata gaattaagtt gaaacctccg caatagttag atgctttaag
     1381 caagttctat ttgtcaaagt caaactgcat agcctctcta accagtttga tcgttttcgc
     1441 ggcacttgcg cggcccttct ccctgccctg ccttataacg tttgaaaggt atgctttatc
     1501 gctttgaata gccgcagcct tttcacgcag cggcgcgatg aacgcaacca tatcctcggc
     1561 caattgcttt ttcatatctc cataacgaat actgcagttt tcataatcag tttcatattt
     1621 tgcaacaacg gtgtaatcac tcaccaactg catcaacaaa aaaaggtttt caatgtaatc
     1681 gggtttcggc gttccttttt ctgttggccc gctgtctgtt tttgctttca tgatcttttt
     1741 acggatcata tcgtcatcgt ccaccaggta gatcgtcgcc atctggttct ggctcttgct
     1801 catttttccg ttcccgtcga ggcttaaaat ttttgtgagc tcgctgccat agttgaaagc
     1861 gtatggcaat ggaaatatat cgccataccg gtaattaaaa cgttgcgcaa aatttctcga
     1921 catttcgaga tgctgttcct ggtcttttcc aaccggaact tttactgcgc ggtggatcag
     1981 gatatccgcg gcctgcaata ccggataagt taacaggccg gcattcgcat tgtcaggttg
     2041 ttgccttact ttttccttga aagtcgaagt tttttccagc tcccctttat acgcaagcgt
     2101 attaaaatac aggtacagtt cggcgatctc gggtatgtcg ctttgaacat agataactga
     2161 cctgtcaggg tcgagtccgg cagccaataa ttcactgatc atcctgtgca cgttttgccg
     2221 cagttcttta gtgtccggat gcgttgtaag gctgtgccaa tccaccacgc agaaatagca
     2281 atcatattca tcttgcattc ttgcccagtt cttcacagca ccaaaataat taccgagatg
     2341 taagaaacca gtgggcctta tcccgcttag aacaatttcc tttgccatcg ggcgaagata
     2401 gggattggga attgagattt tagatttagg atttgggatt caggatttag gatttcacct
     2461 tggtaaccgg aatgaaaaac caagcgcaag aaaatagcca ggtgcatttt ccgtgatgcc
     2521 gaacccaccg gaaatatctg cggacatgtt ttgcttaatc aaataggtta atccgcaatc
     2581 gaaactatga tacgctggcg cgtattgcgg cgcgaaccca aaaatttcta caaaggcgct
     2641 tactttttct gaagcagagt agcccgttgt gacagtgtat ataaattcag gttttccgct
     2701 ttcatcatcc cattcagcgc ccacgttata tcccaggtca actttttcag atattgtatt
     2761 ttgcatagcg agcctgaaac cgggagcata cctggagccg atgaaatcct tacttgcaaa
     2821 acgcggaagc gctaacaagc cgagtagaga tgttgtaggc aaaatgcctt tctcttttac
     2881 aatgttcatt ttaaagccaa ctgctaccgg gttaaaacca gtcgcatctt ctatcgaatt
     2941 ttttacagtg atgaattccg tcactagccg aagatcgaaa cggccggtca ccccgtattt
     3001 aaaaaggacg gatgggtgcg caaaggtttt cgtttctgcg tttgtctgct caaaagaaaa
     3061 gccggtctcc atctgaaagt aatgttttgg aagtgtgacg gggctttcag tttgatctgg
     3121 cctgtcggtg tcaatagggc ttatattttg agagaacagg tttgactgag cgaaaagcag
     3181 tacaccaagt atcaaaatat atttcgccat gatctttttt gcaactcaga acatcggcta
     3241 agaaaattgg ttttagtacg actcgcggtc ggtgggaaaa tcttttgatt tcacatcact
     3301 cacataccgg tgcacagctt ctgtcacctg ttcatatatg ttcaggtatt gccgtagaaa
     3361 gcgcggcttg aattctgtgt ttataccaag catgtcatgc atcaccaaca cctggccgtc
     3421 gcaatatttt cctgcaccga tcccgatagt tggaatgctt aggctttccg ttacttcctt
     3481 cgcaagttgg gctggaattt tttccaggac aacagcaaag cagccggatt cttcaagca
//
LOCUS       DASQJI010000873         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1221881,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000873 DASQJI010000000
VERSION     DASQJI010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221881"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VEV83_22600"
     CDS             complement(<1..701)
                     /locus_tag="VEV83_22600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47993.1"
                     /translation="MRRIAARKILLALISLFVYLHFTAAQSSGDYINAIMAGISNNGL
                     SNDKEYLTAGDRTYIVGTQSGNFPDLGGHVKGEMGGLWMPPVKLLDGFWMKISDVDEK
                     SDAWMKEAKQFINYPYGNKFIYAPVLNGIEVERFQFCPQARAGIVIEYELKNESHQQR
                     NLQLEFVVKTDVSPVWFSTENNIIDAPDTVQWLRDKHLFAASDTKHAWFALWGSKLAA
                     STHNTNAIAPVETIG"
     gene            1041..>1822
                     /locus_tag="VEV83_22605"
     CDS             1041..>1822
                     /locus_tag="VEV83_22605"
                     /inference="COORDINATES: protein motif:HMM:NF024810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HYK47994.1"
                     /translation="MKSLLPFSLLCFIASASFSQTGTWTAVSTLAPHASGGGMLLLSD
                     GTVLVKSSSGGGSYGNTYDKLTPNSSGSYVNGTWSSIAPMISTRLYYSSQVLKDGRVY
                     VAGGEYGTGGSSGEVYNPLTNTWTAAPAPGATLSDANSEILEDGRVLQALVSGSLTGT
                     KIYDPSTNTYSNGPTALGIHNESAWIKLPDNSILYVNRLSTNSERYIPATNTWINDAM
                     VPVQLYDPYGDETGGALLLPDGRALFLGSSGHNAYYTPSGSTA"
BASE COUNT          521 a          428 c          384 g          489 t
ORIGIN      
        1 aatccaatcg tttcaacagg agcaattgca ttggtattgt gagtcgatgc agcaagctta
       61 gacccccaca aagcaaacca cgcatgtttg gtatcacttg ctgcaaacaa atgcttatca
      121 cggagccatt gcacggtatc gggcgcatcg ataatgttgt tctccgtcga aaaccaaacc
      181 gggctcacat cagtcttcac cacgaattct aattgcaggt tgcgctgttg atgcgattca
      241 ttttttaatt catattcaat cactattcca gcccgcgctt gcggacaaaa ctgaaaacgt
      301 tccacttcga tgccgtttag aacaggagca taaatgaatt tattgccata cggataattg
      361 ataaactgtt tcgcttcttt catccaggca tcagacttct cgtccacatc ggaaatcttc
      421 atccagaaac catccagcaa tttaaccggc ggcatccaca agccgcccat ctctccttta
      481 acgtgccctc cgaggtcggg aaaatttccg ctctgcgttc caacaatgta agtcctgtct
      541 cctgcagtaa gatattcttt gtcattactg agcccattgt ttgaaatgcc agccatgatt
      601 gcatttatgt aatcgccgct gctttgtgct gcggtgaaat gcaggtatac aaacagtgat
      661 attaatgcca gcaggatctt acgcgccgca attcgtctca tgtttttagc tcaatgatga
      721 tttgaaggtg tatcgaagtt aatgtgcact acaattaagt gcggataaag attgaacagt
      781 aaaagatgtt tttatcccta aacatttaga aatagtttgt aagtgagaaa caattatcat
      841 tattttcgtc gtgtttaaca gcgatttccc aaaacctacg tctgtaatcc ggagatgttt
      901 attaaaaatg tgaaacgaaa ctgacttcaa ttagtcggtt gtgtgtaaga tttcccaccc
      961 aaactgaaga ccacgaactt gctttaatat gcaaccaaaa aaagtgcaga gtcagcacta
     1021 taaacacttt cacaccaaga atgaaatcac ttttaccatt ttcattgcta tgtttcatcg
     1081 cctccgcttc attttcccaa acgggcacat ggacagccgt ttccacacta gctccgcatg
     1141 caagcggtgg tggaatgttg cttctttctg atggaaccgt tttagtaaaa tcgtcatcgg
     1201 gtggcgggtc ctacggtaat acctatgata agctcacacc caacagcagc ggtagctatg
     1261 tgaacggcac atggtcttca attgctccga tgataagcac gcgcctttac tattcatcgc
     1321 aggttctgaa ggacggaaga gtttatgtag cgggcggaga atatggaacg ggcggatctt
     1381 cgggcgaggt ctataatccg ttaacgaata catggactgc cgccccagcg cccggcgcaa
     1441 cgctaagcga tgcgaactcg gaaattctgg aagatggaag agtgctgcaa gctcttgtgt
     1501 caggcagctt aacaggaaca aaaatttatg atccgtcaac caacacttac agcaacggac
     1561 caacagcgct tggaattcat aatgaatcag cgtggataaa acttcctgat aacagcattc
     1621 tctatgttaa caggctgagc acaaattctg aaagatatat acccgcaaca aatacgtgga
     1681 tcaatgatgc aatggtaccg gtgcaattat atgatccgta tggagacgaa acaggtggag
     1741 cacttttatt gcctgatggg cgcgctttgt ttctcggttc atccggccac aacgcatact
     1801 acacaccatc aggcagcaca gc
//
LOCUS       DASQJI010000874        12897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1681932,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000874 DASQJI010000000
VERSION     DASQJI010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 12897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12897
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681932"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VEV83_22610"
     CDS             <1..493
                     /locus_tag="VEV83_22610"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HYK47995.1"
                     /translation="NQGYTLEQLQKFIKDAGKQVELIEQPVKAGADNLLRQLDMNKRK
                     LLAADESLLDATNASFLSHPPQPYGIYNIKLMKCGGIKAARDIASIAMHAGINLFWGC
                     NDESIISITAALHAAYSCSNTKYLDLDGSFDLSKDLVDGGFIVKDGYMYPTNEPGFGF
                     AKL"
     gene            complement(550..1290)
                     /locus_tag="VEV83_22615"
     CDS             complement(550..1290)
                     /locus_tag="VEV83_22615"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYK47996.1"
                     /translation="MEKIKIPTSFNIELEFETPEFHKRLFAWLIDLCILVAYYLIANK
                     LLSQISSNHTASGDDMPFIYNLSAVYLLCYVPLLVYHLVCEISMNGQSIGKKLLGIKV
                     ISENGGQPALHQYLIRWLLRPFDFYFFGLVGLLTVVNSKRNQRLGDMAAGTLVIKTKM
                     ETDINDTVFFELSDGYKPRFKEVMRLSDRDMNVIKGILDNSRKYNNFDIAARTSDKIR
                     SLLNITDYEEPVEFLETLLKDYNYFSNQ"
     gene            1398..2354
                     /locus_tag="VEV83_22620"
     CDS             1398..2354
                     /locus_tag="VEV83_22620"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HYK47997.1"
                     /translation="MREALFIKRNRERWRQIQDNPSHHPDEMAKEFTQLVEDLGYSKT
                     FYPVSKTTQYLNASAARKYLAIYQNRKEKSNRVVNFFKYTLPLIIAKHHRVLLITFSL
                     FVVFVTIGFFSAKNDQSFVRQVLGDYYVDMTEQNIKDGHPFGVYGFGNQFLSFIYIFI
                     NNMYVSLIEFGGGIFLAYPTITSLMYNSVTVGAFEFMFYSNGLLKDSLLTIMIHGTIE
                     LSTFVVSAASGIILAKSWLFPGTIKRIDALKQGAKEGLIIALSNFPMLFIAAFFEGFL
                     TRHTDMPLWLKLFIIILSLTIVVGYFIVYPIRLKRKLNSQNQ"
     gene            2560..3420
                     /locus_tag="VEV83_22625"
     CDS             2560..3420
                     /locus_tag="VEV83_22625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK47998.1"
                     /translation="MISLLTYFLAADANTQTLDTTVVDTTSFSTYDPQTGSSGEDDYA
                     DTPERHIYDTSQYFFTWKKDSSDRFAYTKIQQRLLPDSAIQRLKNSKDFWYIPAIEKL
                     ERRIKDDPAFRDSLLKAANKEITNEESNFTQQPWFNQMLWLIIISIFIAAIIYFLVQN
                     KINLFAKESLARTTETFGDDENGDIFRLQYSELLRRAEHEQNYRSAVRLLYLQTLKLL
                     AETGHIQYQQDYTNLQYVQQLSKSSLYGNFFTVTRHYEFVWYGKFEISKALYEKVKND
                     FLTLQNKVAA"
     gene            3417..4652
                     /locus_tag="VEV83_22630"
     CDS             3417..4652
                     /locus_tag="VEV83_22630"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HYK47999.1"
                     /translation="MRKALPYLAVILLIGSVAFLLVYKKPPKFDGRITLSRRDKIPYG
                     TYAAYNLLPGEFPNATIESNRYSPVLWKSLSSDSTKQVLLIVTKFFNPSETELDYLTS
                     FVQKGNYVLISSLQMNSTARKFFKLKERSSFNPYSPFLETEHPFDPFDTSIVRLDTGM
                     FSLPASFQYPGADYSNQFEKTDSNFTYPLGYAYPENQNLIAVNAMAGTFFIHTSPYAF
                     TNFFLLYEQNRKYFEKVMSLFPGDARKIVWDEYFLYKRSDDQPAMESHGVLSVILKYE
                     NFRWAFWLTLALLFIYILTEVKRRQRIIPPYEKPVNDSLEFVTTIGKLYYEKGDHKNL
                     AEKLTQYFLDYVRNKFKISTTEINPSFVQQLAGKSNRDIAEINAITETIHTINLSETI
                     TQKQLMDYYELLENFYKKS"
     gene            4654..5631
                     /locus_tag="VEV83_22635"
     CDS             4654..5631
                     /locus_tag="VEV83_22635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HYK48000.1"
                     /translation="MSEQIFEQRIDLDELNKAMLDLQSEIKKIIVGQDEMVRLIMVAL
                     LANGHVLIEGVPGVAKTLTARLVAKGLKVGFSRIQFTPDLMPSDVLGTSIFNPGTGKF
                     EFKRGPVFSNIVLIDEVNRAPAKTQAALFEVMQEQQVTMDGITHPMSNPFMVLATQNP
                     IEHEGTYRLPEAQLDRFLFKIIVPYPSEAEEIAILQRFHNLAEENVVSLVQPVITDEQ
                     IIHLRQLIKTVVVEEKLIQFIAKISVATRNEKAIYLGASPRATLAVLNASKALAALLG
                     RDFVIPDDIITVAKPVLRHRIILTPEKEMEGIPEDEVIEKIIHGLEVPR"
     gene            5631..6974
                     /locus_tag="VEV83_22640"
     CDS             5631..6974
                     /locus_tag="VEV83_22640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018629683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HYK48001.1"
                     /translation="MLKRFLYRLRFYLTRLFYISGSVIVGLFVLAFFFAGLQQIAMIG
                     LLCLGISVLLDFIIVFAGPQPVKAERLCADRFSNGDENKVIIQITNYRSYKISAKLID
                     ELPVQFQARNWQHDLHVNGRETFSYEYFLKPVERGEYFFGRINIFMRGPLNLVIRQIT
                     TGEEKKVAVYPSYLQMRKFELMAQTDQLQFAGSRRLRKLGSSLEFEQIKEYVPGDDYR
                     TVNWKATARKNALMVNSYIDERSQQIICVIDKGRSMKMPFEGMTLLDYAINSTLVLSN
                     IVLMKQDKAGVLTFGKKPGQFLQPDKKPAQINLILETLYMQQTDFTDSDFEALYVSIR
                     YQVKQRSLLVLFTNFESLYSLERQLPYLQQLSSHHPLLIVFFENTELAELQQQKADTV
                     EQVYLTTIANKFALEKRQMVKELQKHGIMSLLTPPQKLTANTINKYLELKERQVI"
     gene            complement(7028..7318)
                     /locus_tag="VEV83_22645"
     CDS             complement(7028..7318)
                     /locus_tag="VEV83_22645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012791198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48002.1"
                     /translation="MITKNKRLAAIVLTVAILLLIPFVAMQFTSDVKWDLTDFITAAI
                     LLLGSGLLCELVMRKVKTSKYRFALIGAVLLTLVLIWLELAVGIFGTPFAGS"
     gene            7689..8336
                     /locus_tag="VEV83_22650"
     CDS             7689..8336
                     /locus_tag="VEV83_22650"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HYK48003.1"
                     /translation="MKKLFWLCGILVFVACNKDKITGSGNTISEERNVTGFNGLIVNG
                     STKAFVNIDTGFAVTVKGYENLLPYFETNVVSGVLEAGFSNDITVSNDNTEIHVTAPT
                     LDLLETNGTGDINVTGEITGSDHLNATVNGLASINVEGGNANNFEAEITGDGNISALA
                     FQCKDATVNISGDGDVEISVSDSLDVTITGNGNVYYHGTPAITTHITGNGQVIPK"
     gene            8792..11149
                     /locus_tag="VEV83_22655"
     CDS             8792..11149
                     /locus_tag="VEV83_22655"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014216456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HYK48004.1"
                     /translation="MAMQTKELHKQQALEYHAKGRPGKIEVVPTKETKTQRDLSLAYS
                     PGVAEPCLKIAATKEDVYKYTSKGNLVAVISNGTAVLGLGDIGPEAGKPVMEGKGVLF
                     KIFADIDVFDIEINEKDPEKFVQIVKALEPTFGGINLEDIKSPECFYIEKRLKEEMSI
                     PVMHDDQHGTAIISAAALINALQIQKKKIDKVKFVVNGAGAAAMACILLYEALGAKHE
                     NFRVFDSKGLLHQGRTELDDFKKRFATPKSELTLQQAMKDADVFIGLSVANTVTPDMV
                     RSMAKNPIVFAMANPDPEISWEDATSVRKDIIMATGRSDYPNQVNNVLGFPFIFRGAL
                     DVRATRINEAMKLAAVKALAELATTRVPDIVNLAYSEQNISFGPNYIIPKPLDPRLLS
                     TVAPAVAKAAMESGVAQHPITDWDAYAADLNNRLGQDNQVIRVIGSKARRDPKRIVFA
                     EADNAKILKAAQILFEDGIGYPILLGEESRIKNIAGKNGIDIYGFPIFDTRSDATKEK
                     RLQYAELFFKKRGRKGFNAYESRKIMRDRNYFGCMMVECDDADCMISGLTKNYPDTIR
                     PALHTIGTEEGTKKIAGMYLMLTKKGPLFLADTTVNFNPTAEELADITLMTAKEIRQF
                     NIVPRIAMLSYSNFGSSNSPEARLVSDARQIIKERMPSLIVDGEMQASVAFNQELMKE
                     NYPFCELIDKDVNTLIFPNLASGNIAYNLLKELDTADAIGPILLGLKKPVHILQLGSS
                     VRSIVNMALIAVVDAQIKSKSATEEIIKRSPWWKRFKKSNKELQQ"
     gene            11215..11658
                     /locus_tag="VEV83_22660"
     CDS             11215..11658
                     /locus_tag="VEV83_22660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYK48005.1"
                     /translation="MYIFVTDQLHFMRRDVFQAIADPTRREIINMIAHRPLNLNSVAE
                     QFHISRPAVSKHIKILTECGLITIKQHGRERYCEAELQKLNEVAEWVEQYRTLWTKKL
                     DALEKFLLKDAPGAKRSNAAKVKKKKTTKQLSHKKSSNAKRIIRN"
     gene            11633..12073
                     /locus_tag="VEV83_22665"
     CDS             11633..12073
                     /locus_tag="VEV83_22665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HYK48006.1"
                     /translation="MQNESFVIERTFDAPIEKVWSAITTKEQMKQWYFDLQEFRPEVG
                     FEFRFEAGDKNTKYLHICRITEVMPGKKLVHSWKYDGQDEETYVTWELFDEGNKTRLK
                     LTHEGLERIAKYGRAFAKENFVAGWTDIVGRSLKEFLEKLPVEN"
     gene            complement(12250..>12897)
                     /locus_tag="VEV83_22670"
     CDS             complement(12250..>12897)
                     /locus_tag="VEV83_22670"
                     /inference="COORDINATES: protein motif:HMM:NF013377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004555 - alpha,alpha-trehalase activity
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase family glycosidase"
                     /protein_id="HYK48007.1"
                     /translation="GKNFYTIDTTNIIPVDLNCLLFHLETSLALSYRQTENIIHADVY
                     ARKASMRRDAINKYFYNPDDGWYYDFNINKKSLNDQKTLAGITPFFFNLPPAEYITRA
                     AAIIRSEFLQPGGVVTTVTETEQQWDWPNGWAPLQWMAIKGLDNYGEKELATEIAKRW
                     AQLNIKVYRNTGKLMEKYNVVDTNLTAGGGEYPSQDGFGWTNGVLLKILKTYPVN"
BASE COUNT         3848 a         2818 c         2867 g         3364 t
ORIGIN      
        1 aaaccagggc tacactctgg aacagctgca gaaatttatc aaagacgcag gtaagcaagt
       61 tgaactcatc gaacaaccgg tgaaagcagg agccgataat ctattgcgac aactggatat
      121 gaataaaaga aaactattag ctgcagacga atcgctcctc gacgcgacga atgcatcttt
      181 cctaagtcat ccgccgcagc cttatggcat ttataacatc aagctgatga aatgcggtgg
      241 tattaaagcg gcaagagata tcgcttccat agcaatgcat gcaggtataa atttattttg
      301 gggttgcaac gacgagagca tcataagcat taccgcagcg ctgcatgcgg catattcatg
      361 ttcgaacaca aaatatcttg acctcgatgg aagttttgat ctcagcaaag accttgttga
      421 cggaggattc atcgtgaagg acgggtatat gtatccaaca aacgaaccag gatttggctt
      481 cgcaaaactt tagtgctacc tcacggctat ttacttttca tcggtgtcaa gacttggaag
      541 cgctttttac tattggttcg agaaataatt gtaatccttc agcagcgttt ctaaaaattc
      601 aactggttct tcataatccg tgatgtttaa tagtgagcgg atcttgtcgc tagtccttgc
      661 cgcaatgtcg aagttgttat acttcctgct gttgtccaaa atccctttga tcacattcat
      721 gtcgcgatcg cttaaacgca tcacttcttt aaatctcggt ttgtatccgt ctgacaattc
      781 aaagaacacc gtgtcgttga tatcggtctc cattttcgtt ttaatcacca gcgtgccggc
      841 tgccatatcg ccgagtcgct ggttcctctt gctgttgacg acggttaaca gtccaaccaa
      901 tccgaaaaaa taaaaatcga atgggcgcaa aagccaccgg ataagatatt gatgcaacgc
      961 gggctggcca ccattctcgc tgatcacctt gatgccaagc agttttttgc caatgctttg
     1021 gccgttcata cttatttcgc aaacaagatg gtacacgagc aaaggaacat agcacaacaa
     1081 atacaccgcc gacaggttat aaatgaaggg catatcatct cccgatgccg tgtggttgct
     1141 ggatatttgt gacaacagct tattggcgat caggtagtag gcaaccagta tacaaagatc
     1201 aatcagccac gcaaaaagac gcttatgaaa ttcgggtgtt tcaaactcca gttcgatgtt
     1261 aaaactggta gggattttta ttttttccat tcacaagaaa caattggctg aaaggtaaac
     1321 taattataat ttcccgccga aatcccgcta tagcccccaa cgggttatgt attcggttat
     1381 tcggtaaaac agttacgttg agagaagccc tttttattaa acggaaccgc gaacgatgga
     1441 ggcagataca ggacaacccg agccaccatc cggatgaaat ggcgaaagaa tttacgcagc
     1501 ttgttgaaga cctgggttac agcaagactt tttaccctgt cagcaaaacc actcaatacc
     1561 ttaatgcgtc agcggcaaga aaatatttgg ctatttatca aaatcgaaaa gaaaaaagca
     1621 atcgtgttgt caacttcttt aagtacacac tgcctctgat catcgcaaaa catcaccgcg
     1681 tactcctgat cacattttcc ctttttgtgg tgttcgtcac cattggcttt ttttccgcaa
     1741 agaatgacca gtcttttgtt cgtcaggtac tcggcgacta ttatgttgat atgaccgaac
     1801 aaaatattaa agacgggcat cctttcggcg tgtatggctt tgggaatcaa tttctctcct
     1861 ttatttatat tttcatcaat aacatgtacg tttcgctgat cgaatttggg ggcggcatat
     1921 tcctggcgta cccaactatc accagcctta tgtataattc ggtgactgtt ggtgcatttg
     1981 aatttatgtt ttacagcaat ggccttttaa aagacagcct gcttacgatc atgattcatg
     2041 gtacaattga gctttcaact ttcgttgtct cggcggcttc ggggatcatc ctcgcaaaaa
     2101 gctggctgtt cccgggcacg attaaacgca tcgatgcatt gaagcagggc gcgaaagaag
     2161 gtttgatcat cgcactatcc aattttccaa tgctcttcat cgcagcgttc tttgaaggat
     2221 ttctcacacg ccacaccgat atgccgcttt ggctaaaact gtttataatt atactttctc
     2281 tcaccatcgt tgtaggatat ttcattgttt atcccattcg cttgaaaaga aaactcaact
     2341 ctcaaaacca atagcatgcc tcgtaaatgt ttaaatagtc ttttcggggt acgaggttcc
     2401 gttttttatg gcctgcccga acgtgccgtt ttcgtttctt tatttttcgg aagccggcat
     2461 tcggtacggg cggggatcgc cggttgtgtc actcacttgt acgttccggt ttcatggcgg
     2521 cccttccgtc ttcgcacaaa tcaattgtcg aaaacaattg tgatatcact cttaacttat
     2581 tttctcgccg ccgatgcaaa cactcaaacg ttagatacca cagtcgtcga cacaacaagc
     2641 ttctccactt atgatccgca aacggggagt tctggtgagg acgattatgc cgataccccc
     2701 gaaaggcaca tttatgacac atcacaatat ttttttacct ggaaaaaaga ttccagcgat
     2761 cgtttcgctt acacaaaaat tcaacaacgg ctgttgccgg acagcgccat tcagcggtta
     2821 aagaactcaa aagatttttg gtacatccct gcaattgaaa aattggagag gcgcataaaa
     2881 gatgatccgg cattcagaga cagtctgctt aaagcggcca acaaagaaat aaccaacgaa
     2941 gaaagcaact ttacgcaaca accctggttc aatcaaatgt tgtggcttat catcatatcc
     3001 attttcattg cagcaattat ttatttcctt gtgcaaaaca agatcaacct ctttgcaaaa
     3061 gagtccctgg caagaaccac tgaaacgttc ggcgatgatg agaacggcga catctttcga
     3121 ctacaataca gcgaactgct gcgcagggca gagcatgagc agaattaccg cagcgcagtt
     3181 cggttgctgt acctgcaaac acttaagctc ttagcggaga ccggccatat tcaatatcag
     3241 caagattata cgaacctgca atatgtgcag cagttatcga aaagcagcct gtatggaaat
     3301 ttctttaccg ttacacggca ctatgaattt gtgtggtacg gaaagtttga aatctcaaag
     3361 gctctttatg aaaaagtaaa aaatgatttt ctcacacttc aaaataaagt tgcagcatga
     3421 gaaaggcgtt accatacctc gccgttatct tgctgatcgg gtctgtcgct ttcctgttgg
     3481 tatacaaaaa gcctcccaaa ttcgacggca ggataacctt gagccgcaga gataagatcc
     3541 cgtatggaac ttatgcggca tacaacttgc tgcctggaga attcccaaat gcaacgatcg
     3601 agtctaatcg ttattcacct gttctttgga agtcgctttc ttcagattca accaaacagg
     3661 ttctattgat cgtgacaaaa tttttcaatc cctccgaaac ggaactggac tatctcacaa
     3721 gcttcgtgca aaaaggaaat tatgtgctta tatcttcgtt gcaaatgaat tcaacggccc
     3781 ggaaattttt caagctgaaa gaacggagct cctttaaccc atattcgcct ttcctggaaa
     3841 cagaacatcc gtttgatcct ttcgacactt cgatcgtgcg cctcgatacc ggcatgttct
     3901 cgctgcccgc atcgtttcaa tatcccggtg ctgactattc gaatcaattt gaaaaaaccg
     3961 acagcaactt cacttacccg ttaggttatg cttacccgga aaatcaaaac ctgattgcgg
     4021 taaatgccat ggccggcact tttttcatac atacatcgcc atatgcgttc accaattttt
     4081 ttcttttgta cgaacagaat cgcaaatatt ttgaaaaagt aatgagcctc tttcctggtg
     4141 acgcaaggaa gatcgtgtgg gacgagtact tcctgtataa acgcagcgat gaccagcctg
     4201 ccatggaaag tcatggcgta ttgtctgtca tattgaagta tgagaatttt cgatgggcgt
     4261 tttggctcac gcttgcgtta ctgtttattt acatactgac ggaggtgaag cgcaggcagc
     4321 gaattatccc gccttacgaa aaacctgtga acgattcgtt ggaatttgta acaacgatag
     4381 ggaaactgta ttatgagaaa ggcgaccaca aaaacctcgc tgaaaagttg acgcagtatt
     4441 ttttggacta cgttcgaaac aagttcaaga tctcaaccac agagatcaat ccgtcatttg
     4501 tacaacaact tgccggtaaa tcgaaccggg acatcgcaga aataaatgca attactgaaa
     4561 ccatacacac gataaacctg agcgaaacca ttacccaaaa gcaattaatg gactactacg
     4621 aactactcga aaatttttac aaaaaaagtt aacatgagtg aacaaatatt tgagcaaagg
     4681 atagacctgg acgagttgaa taaggcgatg ttggatcttc agtcggagat aaaaaagatc
     4741 attgtcggac aggacgaaat ggtaaggctg atcatggtgg ctttgcttgc aaacggccac
     4801 gtgttgatcg aaggcgttcc cggcgttgcc aaaacactta ctgcccgact agtcgcgaag
     4861 ggtttgaaag ttggttttag ccgcatacaa ttcacaccgg atttgatgcc cagcgacgtg
     4921 cttggcacaa gcatctttaa cccgggcacc ggaaaatttg aatttaaacg aggacccgtt
     4981 ttcagcaata ttgtactgat cgacgaggta aaccgcgcgc cggcaaaaac gcaagctgcc
     5041 ttgtttgagg tgatgcagga acaacaggtc acgatggatg gtataacgca cccgatgagt
     5101 aatcctttta tggtgctggc aacacaaaac ccgatcgaac acgaagggac gtatcgttta
     5161 cctgaagctc aactggaccg ttttcttttt aagatcatag taccttatcc gagtgaagcg
     5221 gaggagatcg caattctcca acgattccat aacctcgcgg aagaaaacgt ggtgagcctt
     5281 gtgcagcctg tgataacaga tgaacagatc atccatttaa gacaactgat aaaaaccgta
     5341 gtggttgaag aaaagcttat tcagttcatt gcaaaaattt cggttgccac gcgcaacgag
     5401 aaagccatct atcttggtgc gtcgccgcga gcaacactcg ctgtcctcaa cgcatctaaa
     5461 gctttggctg cactgcttgg gagggatttc gtaattcctg acgatatcat aactgtggca
     5521 aaaccggttt tgcgtcaccg gatcattctc actccggaaa aagaaatgga aggcattcca
     5581 gaagatgaag taattgaaaa aattattcac ggactcgaag tgccgaggta atgctgaaac
     5641 gattcttgta ccgcctgcga ttttatttga cccgcttgtt ttacatcagc ggcagcgtca
     5701 tcgttggctt gtttgtgctc gcatttttct ttgccggctt gcagcaaatt gcgatgatag
     5761 gattgctgtg cctcggtatt tcggtattac ttgattttat tatcgtgttt gccgggccac
     5821 agccggtaaa ggccgaacgc ctgtgtgcag acaggttcag caatggtgac gaaaacaagg
     5881 tcatcattca aataacaaat tatcgctcat ataagatttc cgcaaaactg atcgacgaac
     5941 tgccggtaca attccaggcg cggaactggc aacatgatct ccacgtgaac ggccgcgaaa
     6001 ctttctctta cgaatatttt ttgaagccgg ttgaacgcgg tgaatatttt tttgggcgga
     6061 taaatatttt tatgcgcggg ccgctgaatt tggtgatacg gcaaatcaca accggcgaag
     6121 aaaaaaaagt tgcagtgtac ccctcctatc tgcaaatgcg caagtttgaa ttgatggccc
     6181 aaactgacca gttacaattt gcaggttcga gacggctgag aaaacttggc agcagccttg
     6241 agttcgaaca gataaaagaa tatgtaccgg gagatgatta ccgaacggta aactggaaag
     6301 ccaccgcgcg gaagaatgca ttaatggtga acagctacat tgatgaacga agccagcaga
     6361 taatatgtgt gatcgataaa ggccgcagca tgaagatgcc gtttgaagga atgacgctgc
     6421 ttgattacgc tatcaattca acacttgtat taagcaatat tgttttaatg aagcaggata
     6481 aggctggcgt gctaactttt ggaaaaaaac ccggccagtt tctgcagccc gataaaaaac
     6541 ctgcacaaat aaacctgata ctcgaaacat tgtatatgca gcaaaccgat tttaccgaca
     6601 gtgatttcga ggcattatat gtgagcattc gttaccaggt taaacaacgc agcctcctcg
     6661 ttttgttcac caattttgag agcctgtata gcctcgaacg acagttgcct tatttacaac
     6721 agttgtcgtc gcatcatcct ttattgattg tatttttcga aaacacggag ctcgccgaat
     6781 tacagcaaca gaaggcggat actgtcgagc aggtgtatct tacgacgatc gccaacaaat
     6841 ttgctcttga aaaaagacaa atggtgaaag aactccagaa gcatggcatc atgagcctgc
     6901 tcacaccacc gcaaaagctt accgcaaata cgatcaataa atacctggag ttgaaggaac
     6961 ggcaggtgat ttgacccttg cgccaccggc ggtctttcct ggcgcccgcc aacatcaatt
     7021 tcagctttta actgcccgca aatggcgtcc cgaagatgcc gaccgcaagt tctaaccaaa
     7081 taagcaccag tgttaaaaga accgcgccga tcaaagcaaa tcggtattta cttgttttca
     7141 ctttcctcat caccaactca cataacaaac cgctgcccag caacagaatg gcagccgtga
     7201 taaaatcggt gaggtcccac ttcacgtcgc tcgtgaattg catggcgacg aatggtatca
     7261 acaataggat tgctacggtg agcacgatcg cggcaagtct tttgttcttt gtgatcatag
     7321 tgttttattt atgatacaaa gattataaaa gtactttgaa tttcaaagtc actttataaa
     7381 aaaacttttt tgtgcggatt atgctggttg cgggtgaatt tagcatgccg ccggtaagaa
     7441 cttcgggtga agacacccga attgcctcac actgaattgc gtttcataag catcttgttt
     7501 cgtgaaacta atttaacgac aaaaattaca acattgactg ttgggaaatc gtttggtttc
     7561 cgggagagtt tgccgggtaa actgatcttc atcagcatga taagccgtaa atcataaaaa
     7621 gacaaaacac ctttcgtgcg agagatcgtt tcatttcctt atttgtactt tcgcacgaaa
     7681 caatgaaggt gaaaaaatta ttttggcttt gtggaattct ggttttcgtc gcgtgtaaca
     7741 aagataagat aaccggaagc ggcaacacta tttcagagga aagaaacgtt accggtttta
     7801 atggccttat agtaaacggt tcaacaaaag catttgtgaa tattgacacc gggtttgccg
     7861 ttacggtaaa aggttatgaa aacttactac cttattttga gacaaacgta gtaagcggtg
     7921 ttctggaagc gggttttagt aatgacataa cggtaagtaa tgataacacg gaaattcacg
     7981 taaccgcacc aacgcttgat ctcctcgaaa cgaatggaac aggcgatatc aatgtaaccg
     8041 gagaaataac cggcagcgat catctcaacg caacagtgaa cggtttagca agcataaacg
     8101 tggagggtgg gaatgcaaac aacttcgaag ctgagatcac cggcgatgga aatatttctg
     8161 cattggcttt tcagtgtaaa gatgcgacgg taaatatctc aggagacggc gacgttgaga
     8221 taagcgttag cgatagcctt gatgtaacca tcacaggaaa cggaaacgtt tattatcacg
     8281 gcacccccgc gatcactaca cacattacag gcaacggaca agtaattcca aagtaaacct
     8341 ggttggatta ctcgtcgacc aactgttcat cttctcatac gcctttctaa gatccacaat
     8401 gaattagaaa ttggcagcat gacactgcca aaactcaaag tagaaacgct tgctgacatc
     8461 gtcgaagatc taaaggacac aggaaatgtt caggccattg tttaggcggt tctcatgcga
     8521 ttgggaaagc gactgcaaca tccgacctgg atatcggcat ttactattat gaagagaggc
     8581 cttttaaatt agaggacata acactccatc gcaaaaaagc atgctatcaa tgagccgaca
     8641 gtgaccggct tttatgaatg gggacgatga cgtagagggt caaagcacaa aaaacgattt
     8701 tgtacattgc atgtgaattc acattcatgc ttaaggacaa ttgtgaatgg acatgattct
     8761 gataaggtgt tgaaccgtaa actttgaaac gatggctatg caaacgaaag aactacataa
     8821 acaacaggcg ctggaatatc atgcgaaggg aagacctgga aagatcgaag tggttcccac
     8881 aaaagaaaca aaaacacaac gtgatctttc attggcatat agtcctggag ttgctgagcc
     8941 ctgtttaaag atcgcggcga caaaagagga tgtttacaag tacacatcaa aaggaaattt
     9001 ggttgctgtt atcagcaatg gcaccgcggt tttaggcctg ggcgatatcg gtcctgaggc
     9061 tggcaaaccg gtaatggaag gcaagggagt gctgttcaaa attttcgcag atatcgacgt
     9121 attcgatatt gagattaatg aaaaagatcc tgaaaaattt gtacaaatcg ttaaagcgct
     9181 cgaaccaact tttggtggca tcaacctgga agacatcaag tctccggaat gtttttacat
     9241 agaaaaaaga ttaaaggaag aaatgagcat cccggtgatg cacgacgatc agcacggcac
     9301 tgcgatcata agcgcagcgg ccctgataaa tgcattgcag atacagaaaa aaaagatcga
     9361 taaagtaaag tttgtcgtga acggtgcggg cgcagcggcc atggcctgca tcttattgta
     9421 tgaagcactc ggggcaaaac acgaaaactt tcgggtattc gacagcaaag gtttattaca
     9481 ccagggtcgc acagaactcg acgatttcaa gaaacgattt gcaacgccga aatctgaatt
     9541 aacgctgcaa caggcaatga aagatgcaga cgtattcatt gggctaagtg tcgcaaacac
     9601 cgtaacgccg gatatggtgc ggtcaatggc aaaaaacccg atcgtttttg caatggctaa
     9661 tcccgaccct gagatcagtt gggaagatgc aacgtcagtg aggaaagata tcatcatggc
     9721 taccggtcgt agcgattatc ctaaccaggt gaataatgtg ctgggcttcc catttatttt
     9781 tcgcggcgct ttggatgtgc gtgcgacacg tataaacgaa gcaatgaaac tcgctgccgt
     9841 gaaggccctt gccgaacttg ccacaacgcg agtgcccgac attgtgaacc ttgcttacag
     9901 cgaacagaac atttcctttg gccctaatta cataattcca aaacccctcg atcccagatt
     9961 gctctcaacg gtagcacctg cagtcgcaaa agctgcaatg gaaagtggtg tggcacaaca
    10021 tccgatcact gattgggatg cgtatgcggc cgatttgaat aatcgtcttg gccaggataa
    10081 ccaggtgatc cgtgtgatcg gcagcaaagc gcgtcgcgat cccaagcgaa tcgtttttgc
    10141 agaagcagac aatgctaaaa ttctgaaagc agcgcaaata ctgtttgaag atggcattgg
    10201 gtacccgatc ctgctgggtg aagagagccg tattaaaaac attgcaggaa aaaatggtat
    10261 cgacatttat ggttttccaa tatttgatac gagaagtgat gcgactaaag aaaagcgcct
    10321 tcagtatgcg gagctgttct ttaagaaaag aggccgcaag ggtttcaatg cttacgaatc
    10381 gcgaaagatc atgcgcgacc gcaattattt cggatgtatg atggtcgagt gtgatgatgc
    10441 agattgtatg atctctggcc tcacaaaaaa ttatcctgat acaatacgac cggccttgca
    10501 taccataggc actgaagaag gcacaaagaa gatcgccggc atgtacctga tgctgacgaa
    10561 aaaaggaccc ttgttcctgg ctgatacgac ggtaaatttc aatccgactg ccgaggaact
    10621 ggcagatatc acattgatga ccgcaaaaga gatccggcag tttaatattg ttccgcgcat
    10681 tgccatgctg agttattcaa actttggcag cagcaattcc ccggaagcca gattggtgtc
    10741 agatgcacgg caaattataa aagaacgaat gccctcactg atcgtcgatg gtgaaatgca
    10801 ggcgagcgtt gcgttcaacc aggaattgat gaaagagaat tatccttttt gcgaattgat
    10861 cgacaaagat gtaaacacgc tcatttttcc aaatcttgca tcaggtaata tcgcctacaa
    10921 cctgctaaag gagctggaca ctgccgatgc catcggtcct atcctgctcg gtctgaaaaa
    10981 acctgtccac attttacaat taggaagttc tgttcgcagt attgtaaata tggcattgat
    11041 cgcagtggtg gacgcgcaaa ttaaaagtaa aagcgccacg gaagagatca tcaaaaggtc
    11101 gccgtggtgg aaacgattca aaaaatccaa taaagaattg cagcaatagg ccctctgtcc
    11161 taccctgcct ctcaaaaata tttttttgtc taaaatttgt aaccgaatgg tttcatgtat
    11221 atatttgtaa ccgatcagtt acattttatg aggcgggacg tattccaggc gattgccgat
    11281 ccaacacggc gcgagatcat caatatgatc gcacaccggc cactcaatct gaattcggtg
    11341 gctgagcagt ttcatatcag cagacctgcc gtttcaaaac atataaagat ccttacagaa
    11401 tgcggtttga taacgatcaa acaacatggc cgtgaacggt actgcgaagc tgaacttcaa
    11461 aagctgaatg aagtagctga atgggttgaa cagtatcgca cgttatggac aaagaaactt
    11521 gacgctcttg aaaaatttct tttgaaggac gcacctggtg cgaagagatc aaacgccgca
    11581 aaagtgaaaa agaaaaaaac aactaaacaa ctttcacaca aaaaatcatc caatgcaaaa
    11641 cgaatcattc gtaattgagc gcacatttga tgcaccaatc gaaaaagttt ggagtgccat
    11701 taccaccaaa gaacaaatga aacaatggta tttcgacctg caagaattca gacctgaagt
    11761 cggttttgaa ttccgctttg aggctggcga caagaacaca aaatatttgc acatctgcag
    11821 gataacagag gtcatgcccg gcaaaaagct tgttcacagc tggaagtacg acgggcagga
    11881 tgaagaaact tacgtaacat gggaactttt cgatgaaggg aataaaacaa gactcaagct
    11941 tacacatgaa ggacttgaaa ggatcgcgaa atatgggcga gcttttgcga aagaaaattt
    12001 tgtcgcaggg tggacggata ttgttggcag atctttaaag gaatttttgg aaaaactacc
    12061 ggtagaaaat tgaaaaagcg ttttctcaag cttcatcaat tatgaccctc gccgagcact
    12121 gtgctccatg accaggacaa agcaagcgct gggtcaatca aaacctggca gttttgattg
    12181 ttctatttct gagcctgaat atttgcaaaa tgtgtcaggt ttgagggaca tctttatgtt
    12241 gactcagtat tagttcaccg ggtaggtttt aaggatcttc aggagcacgc cattggtcca
    12301 tccaaaacca tcttgtgagg gatattcgcc accacctgct gtaaggttcg tgtcaacgac
    12361 gttatatttc tccataagct tgccggtatt gcgatacact tttatattca gttgcgccca
    12421 acgctttgcg atctcagtcg cgagttcttt ttcgccgtag ttatccagcc cttttatcgc
    12481 catccattgc aaaggcgccc agccgttagg ccagtcccac tgctgttccg tttccgttac
    12541 cgttgtgaca acgccgccag gttgtaaaaa ttcactgcga ataatggcag ctgctctggt
    12601 tatgtattct gccggcggca ggttaaagaa aaacggcgtg attcctgcga gtgttttttg
    12661 atcattcaaa ctttttttgt tgatgttgaa atcataatac catccgtcgt cagggttata
    12721 aaaatatttg ttgatcgcat ccctgcgcat ggaggccttc ctggcatata catccgcatg
    12781 tattatgttt tccgtttgac ggtatgacaa agccaatgaa gtttccaggt gaaacagaag
    12841 gcaattcaga tcgacaggaa ttatgttcgt agtatcgatc gtataaaaat ttttccc
//
LOCUS       DASQJI010000875         2495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1991880,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000875 DASQJI010000000
VERSION     DASQJI010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991880"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VEV83_22675"
     CDS             complement(<1..224)
                     /locus_tag="VEV83_22675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HYK48008.1"
                     /translation="MEYAERFTKLVDIMDELREKCAWDRKQTIQTLRPLTIEETYELA
                     DAITEQNWDELKEELGDLLLHILFYSRIAK"
     gene            457..1287
                     /locus_tag="VEV83_22680"
     CDS             457..1287
                     /locus_tag="VEV83_22680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48009.1"
                     /translation="MQKVILIGVLLATLNHVCAQYYYNDILSLKESNRMYLTLKKNNI
                     KEVSATSIESDNSPTEGFSYNRVIQNNGSLLITHISLATAGSSVTYEYYTGDRLMKSI
                     DSSFRVATTVQYQYNDRDNVVASIETQTDDTSMNVFSTELHKWFYTNGVPDSMLRVKE
                     RTDTTIVTFKKDDRQNVTEEIWTKKGKTLEHYYYYYNDQSQLTDIVRYNNKARQMLPD
                     FLFQYDGGGIISQMTQVSQGSSDYVIWQYVYDQRGLKIKDVLFDKRQELLGTVTYTYQ
                     "
     gene            complement(1335..1679)
                     /locus_tag="VEV83_22685"
     CDS             complement(1335..1679)
                     /locus_tag="VEV83_22685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48010.1"
                     /translation="MEDLTNIWSADDELNEEQLMNYVKGKLTGEGAHAVERNMARSSF
                     VKDAVEGLQEFSSAEKINAYQKDINDQLHKNLTEKRSERKKVIGNLSWEIIAVIVVIL
                     LCLLAFVIVEMM"
     gene            complement(1679..2245)
                     /locus_tag="VEV83_22690"
     CDS             complement(1679..2245)
                     /locus_tag="VEV83_22690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008585872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYK48011.1"
                     /translation="MNEKDFHHLTDQEILENYYTTGNARLLGVLLQRYTLLLLGVCMK
                     YLKNEEAAKDATQQVFLKVIGELRRYRVQYFKSWLYMIARNHCLMQLRNHTHKHARSL
                     NEDMAIEDDSPLQYHTRKEKVLSLLESSLDELNAEQKTCVTLFYLEKRSYQQISEQTG
                     FTLMQVKSHIQNGKRNLKLLVERKLKEK"
BASE COUNT          723 a          547 c          482 g          743 t
ORIGIN      
        1 tcctttgcta tgcgtgaata aaaaagaata tgcaacaaaa ggtctcccag ctcttctttc
       61 aactcgtccc agttttgttc tgtgatcgcg tctgccagtt cgtacgtttc ctcgatcgtt
      121 agcggccgca acgtctggat agtttgtttt ctatcccatg cacatttttc acgcaattca
      181 tccatgatgt cgacaagttt cgtaaaacgt tcagcgtatt ccatactaga gcccggttaa
      241 agagtgagcg gaaaatatga caatcaatat tacaggaaca aaagcataag aaaataacaa
      301 aaatctaaat tgcttaccct gttcgcgggg taaatatcac gtattcgtgc gttcggttaa
      361 taaaaccaga atttcactaa aatacacacg acaatttaag aagcaatata taccttgccg
      421 ccgttttttc gttagaggat attcaaatcg agttccatgc agaaggtaat tttgattggt
      481 gttttattgg caacccttaa tcatgtttgt gcccagtatt attataacga catcctgtcg
      541 ttgaaggagt caaacaggat gtaccttact ttgaaaaaga acaatattaa agaagtttca
      601 gcaacgagca tagagagcga caacagcccg acggaaggat tttcttataa ccgtgtaatt
      661 caaaacaatg gttccctgct gatcacgcac atcagcctgg cgactgcagg cagctccgta
      721 acctacgaat attataccgg ggatcggctt atgaaatcga tcgacagctc attccgtgtg
      781 gcgaccaccg tacaatacca gtacaatgac cgcgacaacg tcgtcgcctc catcgaaaca
      841 caaacggacg atacttcaat gaatgtgttt agtactgaat tgcacaagtg gttttacact
      901 aatggtgtgc ccgattctat gttgcgcgta aaggaacgta cggatacaac gattgtgacc
      961 tttaaaaaag acgacaggca gaatgtgacc gaagaaatat ggaccaagaa gggaaaaacg
     1021 cttgagcatt attactacta ctataacgat cagtcgcagc tcaccgacat tgtccgctat
     1081 aacaacaaag ccaggcaaat gctgcctgac tttctgtttc agtatgatgg cggtgggatc
     1141 atttcgcaaa tgacacaagt gtcgcaggga tcatcggatt acgtgatctg gcagtatgtt
     1201 tatgaccaac gcggcctaaa gatcaaagat gttttgtttg ataaacggca ggaactcctc
     1261 ggcacggtca cttatacata tcaatagagt tggttactcg caacgaaatc cgaatcatgc
     1321 gttcctcaga caagtcacat catttccacg atcacaaagg cgagcaggca gagaagtata
     1381 acgacgatca ctgctatgat ctcccatgag agatttccga taaccttttt tcgctccgat
     1441 cttttttcgg tgagattctt atggagttga tcgtttatat ctttttgata agcatttatc
     1501 ttttcggctg atgaaaattc ctgtaaccct tctactgcat ccttgacaaa agacgatcgc
     1561 gccatatttc tttcaacggc atgcgcccct tccccggtta attttccttt tacataattc
     1621 atcagttgct cttcattcaa ctcatcatcc gcgctccata tgttggtaag gtcttccatt
     1681 atttttcttt caattttctt tccacaagca gtttaaggtt tcgtttaccg ttctgaatat
     1741 ggctttttac ctgcatcagc gtaaagcccg tttgttcgct gatctgctgg taagatctct
     1801 tttcaagata aaataaagtt acacaggttt tttgctctgc gttcaattcg tcgagcgagc
     1861 tttccagcag cgacaatact ttttctttcc tcgtatgata ttgtaacggt gagtcgtctt
     1921 caatagccat gtcttcgttt aatgacctgg catgtttatg ggtgtgattt cgcaactgca
     1981 tcaggcagtg attacgtgcg atcatgtaca accaactctt aaagtattgt accctgtagc
     2041 gtcttagctc gccgatcact ttcaggaaaa cctgttgggt ggcatccttt gctgcttctt
     2101 cattctttaa atacttcatg cacactccca gcaataaaag cgtgtaacgc tgcagtagca
     2161 caccaagcag gcgcgcattg ccagtcgtgt aataattttc caggatctcc tggtcagtaa
     2221 ggtgatgaaa atctttttcg ttcacatagc aaaacttatt caaaggatgc agagatagga
     2281 aatttccata aaattttcat ccaagcaaaa gcatcgcatc ggtgatccga aaaaaattaa
     2341 cggaaacaat ttttaaaaac cgtttgttta aaaagcaatc atcttagcga ttttcaaaac
     2401 ggagctataa atagcctgta ttaaatgtta ttttacatta aaaccagcaa tcttatgcag
     2461 ttgcagagga tcataaatat ttccatcttt tatta
//
LOCUS       DASQJI010000876         8570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2146100,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000876 DASQJI010000000
VERSION     DASQJI010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8570
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2146100"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VEV83_22695"
     CDS             complement(<1..327)
                     /locus_tag="VEV83_22695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48012.1"
                     /translation="MFRRISLFLAFMSVGSLYAQTHLYDSYKNDGEFGAAIGLAHYFG
                     DLNTQASLNRPKFSGGIFFIKQFNNYIGVRISGDYAFLGYSDIYSDNETQRRRNLSFN
                     TNVWEVS"
     gene            complement(408..1280)
                     /locus_tag="VEV83_22700"
     CDS             complement(408..1280)
                     /locus_tag="VEV83_22700"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HYK48013.1"
                     /translation="MKVAIYSRGHEQELKEELSQLVSELTRNNIRVLLHFSLERFIHE
                     DRHHAFSFFSSHEELNETVDFLISLGGDGTILDTVTLVRNKNIPILGINYGRLGFLAG
                     ISKHEMSTAVDALVNRTFVVDKRTLIHLDANVSLFGDAPFGLNEFSIHKRDISPMIKI
                     NTYLNGEFLNNYWCDGLIVATPTGSTGYNMSCNGPIVFPESASIVITPVAPHNLNVRP
                     IVVPDNYVISFEVESRNEQFICAMDARREIVHKDVQLAVKKEAFTISLVRLNENNFLS
                     TLHTKLTWGLDKRN"
     gene            complement(1356..2801)
                     /locus_tag="VEV83_22705"
     CDS             complement(1356..2801)
                     /locus_tag="VEV83_22705"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYK48014.1"
                     /translation="MKCIHLIVIFLVFFGITNDAVAQDDSAKYVPVSPDSLKISDTSS
                     KPLYIASISIYGNKKTKPFIIEREIPFKQGDYLTAADLEKQLVVAKQQLVNTSLFLDV
                     SVFIQNKFGELVFITVSVRERWYLFPLPYFKLADRNFNTWWVTYDHSFQRVNYGVKFL
                     HNNISGRNDKFTVWLITGYSRQFALKYERPFVDRNLHYGYNVYVSYTQQRELNYGTSE
                     NIQKFFKPDSLFFVRRAFNVEADYVYRPALHTKHVFRFQYAGEKVADTIIALNPNYFP
                     EGKTEISYPEIGYNIQYQHADYNMYPTKGFLGEARLLHRGFNSDVNVTQLQLLSTYTI
                     PLFTKTQLQLKEGASISVPFNQPFYNKRLFGYGQIFMRGLEYYVIDGVAGGVGRATLQ
                     HQFLQFNTRLAAGTKKEVNLPFRFFAKLYTDVGYAYDENPSNSMLNNKFLHSWGFGLD
                     VVAVYDIIFKFDYSFNQFGESGLYIHVRTDF"
     gene            complement(2893..3552)
                     /locus_tag="VEV83_22710"
     CDS             complement(2893..3552)
                     /locus_tag="VEV83_22710"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYK48015.1"
                     /translation="MLVSEITHSTIPALHYDDTVEEAIELLEQNNVRHLPVLNEDKYE
                     GLLSLDELLEANSHDQVNTLQNKFIHVSVPANQHFLTALKVMAAADVSVLPVLSQNNE
                     YTGTVSQQELLHTLYTYLNCDEPGGIFVVEMYKQKFSVGELCRLVETNDAFVTQLNTY
                     TEHLSGLLIVTFKINKTEVSDVLATLQRYEYTVRYYFGEEYYENALKENFENLMSYLN
                     V"
     gene            complement(3588..4367)
                     /locus_tag="VEV83_22715"
     CDS             complement(3588..4367)
                     /locus_tag="VEV83_22715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYK48016.1"
                     /translation="MQHEIKHLDKFRFIEEGEGEPLILLHGLFGALSNFESLIAHFRQ
                     THKVVVPMLPLFELDLLHTSVGGFAKYMHKFIEKRGYTDYHLLGNSLGGHIALVHVLK
                     HPEKVKSLILTGSSGLYESGMGDSYPRRKDYEYIRKKTELTFYDPATATTQLIDEVYE
                     ICNNRLQLVRILALAKSAIRNNLGEELGQIKQPTLLVWGNQDSVTPPFVAQEFQRLIP
                     NSELRFIDKCGHAPMMEQPEEFNRVLEEFLTKIKKTAATLA"
     gene            complement(4452..4988)
                     /locus_tag="VEV83_22720"
     CDS             complement(4452..4988)
                     /locus_tag="VEV83_22720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008586414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HYK48017.1"
                     /translation="MIIDIIFLLLLAIAVIKGISRGFVVAVFSFLAIIIGIAAAMKLS
                     YIVANWLQGSFNTGKAWLPFISFLIVFIGVIILVRWVANLIQAALNVTMLGWLNKLGG
                     VVLYVLLFVAVYSIVLFYLTKINLIKAETISSSHAYSFIEPFGPKVVDLLGAVIPIFK
                     NLFQQLSDFFGKVASGSA"
     gene            complement(5045..5497)
                     /locus_tag="VEV83_22725"
     CDS             complement(5045..5497)
                     /locus_tag="VEV83_22725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HYK48018.1"
                     /translation="MNLEQKVMAEMKDAMKAKDEAALRGLRAIKAEIIKAKAEPGAGG
                     EISAETENKMLQKMLKQRKDSLDIYRNQNRADLAKKEEEEIAIIEKFLPAQLTEDQLK
                     DELRKIIAEMGASSPADMGKVMGAASKQLAGKADGKTISSAVRELLNG"
     gene            complement(5579..5938)
                     /gene="gldC"
                     /locus_tag="VEV83_22730"
     CDS             complement(5579..5938)
                     /gene="gldC"
                     /locus_tag="VEV83_22730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldC"
                     /protein_id="HYK48019.1"
                     /translation="MEKQTISIQVKLDEDKVPQQIEWNTTGTTVEHTQQAKGLMLAFW
                     DGEEKTAMRIDLWTKEMMVDEMADFFYQTLMTMADTYNRATHQQELTDELKEFAKNFY
                     KKFRDLQLKETNESKTF"
     gene            complement(5972..7063)
                     /locus_tag="VEV83_22735"
     CDS             complement(5972..7063)
                     /locus_tag="VEV83_22735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYK48020.1"
                     /translation="MRIAVVHHIKAGDYAEYLSALVNSQAMQKDFAVKVWSYSIPASQ
                     QYIPDDAVVYIIMEANSRFAVSWWYAVKLPAILKKIGAKAVLDLNGITPVKTILPKIT
                     AFPETVFAGDKQRGIIDFAKQQLPHSVSKASKMIVHSADKATAFKNVPENKIEVIPFT
                     PPSAFRTFEWHEKIMIKAQQADNKEYFIAVLEDEAEEVFVRLLKAFTKFKAWQQSSMQ
                     LLILPKFESFSPGIRQKHETYKYREDVRLLEDLEESQVASVLASAYGMVLLWASHPDL
                     VVLTAGLQCALPVISLNNPDVLEYAGDAAVYVQDETVDALSATMIQLYKDEDLHARLK
                     EAGKNMSALLNRNEYEMRFWRILETAACS"
     gene            complement(7126..8136)
                     /gene="holA"
                     /locus_tag="VEV83_22740"
     CDS             complement(7126..8136)
                     /gene="holA"
                     /locus_tag="VEV83_22740"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HYK48021.1"
                     /translation="MSAEKIISDWKQKKFKPVYWLEGEEPFFIDEVVDYAEHHLLSET
                     EAAFNLTVFYGKDSEWPDVVNACMRYPMFSDRQVVLLKEGQQMKDIEKLENYIHRPLS
                     STLFVVSYKDKKLDARTKLSKFLKQNGEVLATKKIYDNQLPEWTSQMVESKGLTINHN
                     ALLLLVDHIGNDLSRLKNEVDKLSINLASKKNITEADIEKYIGISKDYNVFELQDAIS
                     QKNLPKAIRIIQYFQANPKAGPLQLILPTLYNYFSKIYMAASTPDVSEKFLKPLFYNN
                     PFAVKQAMVAINNYGFSGAEKIILLLHEYNLKGIGINNAYSGSAGDGEILKELAVKII
                     AA"
     gene            8217..>8570
                     /locus_tag="VEV83_22745"
     CDS             8217..>8570
                     /locus_tag="VEV83_22745"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HYK48022.1"
                     /translation="MKRFFAVLACAFFLIDGQGQSYKKIHFKSILCDTHNDIISTCLE
                     KNYRFDEDLTGKTHSDLNRMFKGGIDVQVFSVWCDETRQQPYQFANREIDTLYAWIAR
                     NPTKMMLVTNSDELSR"
BASE COUNT         2284 a         1956 c         1787 g         2543 t
ORIGIN      
        1 agaaacttcc caaacattgg tgttgaagct gagattgcgt cttctctgtg tttcattatc
       61 gctatagatg tcactgtaac cgagaaatgc ataatcgccc gagatccgca cgccgatata
      121 attattaaat tgtttgatga aaaagatgcc gcccgaaaac tttggccggt tgagcgatgc
      181 ttgtgtgttg aggtcgccaa aataatgggc aagccctatt gcggctccaa actcgccatc
      241 gtttttgtag ctgtcatata agtgagtttg tgcgtacaaa ctgcccacac tcatgaaagc
      301 caaaaaaaga gaaatcctcc tgaacatgct gccaattaaa ggttgtaatg tattaacgaa
      361 cgattgataa atttcgtgtg tccccatcga agttatcgat tgcctgctta atttcttttg
      421 tccagtcccc acgtaagttt tgtatgcaag gtcgacagaa aattgttctc gttcagccgc
      481 acgaggctta tagtgaacgc ctcttttttt accgcgagct gcacatcctt atgcacgatc
      541 tctcttcggg cgtccatggc gcagataaat tgctcattgc ggctctccac ttcaaacgat
      601 attacataat tatcaggtac aacgatcggc cttacattca aattatgcgg tgctaccggc
      661 gttatcacaa tgctggctga ttcgggaaat acgataggcc cattgcagct catgttgtaa
      721 ccagttgaac ccgtaggcgt ggctactatc aatccatcac accagtagtt attcaaaaat
      781 tctccgttga gataagtatt tattttgatc atcggagaaa tgtccctttt atgaattgaa
      841 aattcattca agccgaaagg ggcgtcgccg aataagctca catttgcatc caaatgaata
      901 agtgttcgtt tatcaaccac gaaggttctg ttcacgagcg catcaacagc cgttgacatt
      961 tcgtgcttac taatgccggc caaaaaaccg agccggccat aattgatgcc aagtattgga
     1021 atgttcttat ttcggaccag cgtgactgta tcaagaatag taccgtcgcc cccaagactg
     1081 atgagaaaat ctacagtttc atttaattct tcatggctcg agaaaaaact gaacgcatga
     1141 tgcctgtcct catgaatgaa ccgctctaat gaaaaatgca ggagaacacg aatgttgttt
     1201 cttgtgagct cgcttaccaa ttgcgacaac tcttccttta attcctgttc atgaccccgg
     1261 ctgtagatcg ctactttcat ctggcgattt ttattctctg tgctttcggc aacgtttcgg
     1321 gcttgaagat accatgtaaa ttttttgtag agaggctaaa aatctgttct aacatgaata
     1381 tacaagccgc tctcaccaaa ctggttgaag ctgtaatcga atttaaaaat aatatcgtat
     1441 acagcaacta cgtcgagtcc aaatccccag gagtgcaaaa atttattgtt cagcatgcta
     1501 ttggacgggt tctcatcata tgcatatcca acgtcggtgt atagttttgc gaaaaatctg
     1561 aacggaagat ttacttcttt tttcgttccg gccgcaagcc gcgtattgaa ttgcagaaat
     1621 tggtgttgca gcgtcgccct tccaacgccg cccgcaacgc catcgatcac gtagtattcg
     1681 agccctcgca tgaagatctg tccatatcca aacaaacgtt tattgtagaa cggctgatta
     1741 aaaggcacgc tgatactagc cccttctttt aactgaagtt gggtcttggt aaaaagcggg
     1801 atcgtgtaag tgctcaagag ttgcaactgc gtaacgttga cgtctgaatt aaacccgcga
     1861 tgcaataagc gcgcttcgcc taaaaaaccc ttcgttgggt acatgttata atccgcatgc
     1921 tggtattgaa tgttataacc gatctccggg tacgagatct cggtttttcc ctccggaaaa
     1981 taattcggat tcagcgcgat gatagtgtcg gctacttttt cgcccgcata ttgaaatctg
     2041 aatacgtgtt ttgtatgcag tgccggccgg taaacataat ccgcttccac attgaaagcc
     2101 cttctgacga agaacaggct atcaggcttg aagaattttt gaatgttctc actcgtccca
     2161 taatttaatt cgcgttgctg tgtatagctc acgtagacat tatagccgta gtgcaaattc
     2221 ctgtcgacga atggcctttc atatttcaat gcaaattgtc gcgaataccc ggtgatgagc
     2281 cagacggtaa acttgtcatt cctgcccgaa atgttattgt gcaggaactt aacgccgtaa
     2341 ttcaccctct ggaaactgtg atcatatgta acccaccacg tgttgaaatt gcgatcggcc
     2401 aatttaaaat aaggtagggg aaaaagatac catcgctccc ttacggagac cgtgataaaa
     2461 acaagctcac caaatttgtt ttggatgaaa accgagacgt ctaagaagag gcttgtgttt
     2521 accagttgct gcttcgccac cacgagctgt ttttcaaggt ctgcagccgt aagataatct
     2581 ccctgtttga aaggaatttc acgctcgata atgaacggct tcgtcttctt attaccataa
     2641 atcgaaatgc tggcgatgta caatggcttt gacgatgtat cggaaatctt tagcgagtcg
     2701 ggacttacag gaacgtactt cgcggaatcg tcctgagcta cagcatcatt tgtaatgccg
     2761 aagaaaacga gaaatataac aatgagatgg atacacttca tccgaggttc acgctgccgg
     2821 ttaagccggg taaaaatatg gtatcgcagt cagaagaggt cagtatctgt aaatttttaa
     2881 cacccggaag aattaaacat tcaggtatga catcaggttt tcaaaatttt ccttcaaggc
     2941 attttcgtag tactcttccc cgaaataata tcggaccgtg tattcataac gctgcaatgt
     3001 tgcaagcacg tcagacacct cggtcttgtt tattttaaac gttacgatca acaagccaga
     3061 cagatgttcg gtgtaggtat ttagctgagt tacaaaggca tcgtttgtct ccaccaggcg
     3121 gcaaagctca ccgacagaaa atttttgctt gtacatttcc accacaaaaa ttcccccggg
     3181 ctcatcgcag tttaagtatg tgtaaagcgt gtgcagtaat tcctgttgtg acacggtgcc
     3241 tgtatactcg ttgttttgag aaagcaccgg caacaccgag acgtcggcag cagccatcac
     3301 ttttagtgca gtgagaaagt gctgatttgc gggtacgctt acatggataa atttgttttg
     3361 cagggtattc acctggtcat ggctgttggc ctccaggagc tcgtccaggc ttaacaggcc
     3421 ttcatatttg tcttcattta ataccggcag atgccgcaca ttgttttgct ccaatagctc
     3481 tattgcctct tctacggtat catcataatg tagtgcaggg atcgttgagt gagtaatttc
     3541 tgataccaac attttttgtt tctcccttaa gcgttagaca aagaaaccta tgccaaagtt
     3601 gcagcagtct ttttaatttt tgtgagaaac tcttccagta cacggttaaa ctcttccggc
     3661 tgttccatca tcggggcatg gccgcattta tcaatgaagc gcaattcgct gttcggaatt
     3721 aaacgctgaa attcctgtgc gacaaacggt ggtgtaactg aatcctggtt tccccaaacg
     3781 agtaatgtgg gttgcttgat ttgccccaac tcttccccga gattgtttct tatcgcgctt
     3841 tttgcaagcg ccaaaatgcg gaccaattgt aacctgttgt tgcagatctc gtacacttca
     3901 tcaattaact gtgttgtagc cgtcgcagga tcgtaaaaag tcagttcggt ttttttgcga
     3961 atgtattcgt aatctttccg gcgtggatat gaatcaccca tgccgctttc atacaacccg
     4021 gaacttcctg taagaattaa actctttact ttttccgggt gttttaaaac gtgcaccagc
     4081 gcgatgtgcc cgcccagcga attccccaaa agatgatagt cagtgtagcc tcttttctcg
     4141 atgaacttgt gcatatattt tgcaaagcca ccgactgatg tgtgcaacaa gtcgagctca
     4201 aacaaaggaa gcatcggcac cactacttta tgagtttgcc tgaaatgagc gatgagagat
     4261 tcgaaattac ttagcgctcc aaaaaggccg tgcagcaata tcaatggctc gccctctcct
     4321 tcctcaataa atctaaactt gtccaggtgt ttgatttcgt gttgcatgag ctccttgcgt
     4381 acttctgaaa atggttaacc cgatacgcta aaataatatt atttcaatta ctaattgaat
     4441 attaacataa actaagcaga gccggatgca acttttccga aaaaatccga gagctgctga
     4501 aacagatttt tgaaaattgg gatcacagct ccgagcaggt ctaccacttt aggaccgaat
     4561 ggttcaatga atgaatatgc gtgtgaactt gaaatcgttt ctgctttgat caggtttatt
     4621 ttggtaagat aaaaaagcac aatgctgtaa acggccacga acaataatac gtataacacc
     4681 acccctccca atttgttcaa ccagcccaac atggtaacat ttaacgccgc ctggatcagg
     4741 ttcgctaccc atcgcaccag gatgatcacg ccgataaaga caatcaaaaa agagataaat
     4801 ggcagccacg ccttgccggt attgaatgat ccctgcaacc agtttgctac tatataagaa
     4861 agtttcatcg ccgcggcaat accgatgatt atcgcaagaa aggaaaatac ggcaacgacg
     4921 aaaccacggg aaattccttt tattacagct attgcaagta acagcagaaa aattatatca
     4981 attatcattt aataaataca acggtatagt attaaacgat acaagcccgg ttttgttata
     5041 acgatcagcc gttcagtaat tcccggactg ccgaagagat cgtttttccg tcagcttttc
     5101 cggcaagttg cttcgaagcc gcccccatca ccttgcccat atcggccggc gacgacgcgc
     5161 ccatctcagc tataattttt ctcagttcat ctttcagttg atcttcggtt aactgcgccg
     5221 gcaggaattt ttctatgatg gcgatctctt cttcttcttt ttttgcgagg tcagcgcggt
     5281 tttggttgcg atagatgtca agagaatcct ttcgctgctt taacatcttt tgcaacattt
     5341 tgttttccgt ctcggctgag atctcgcccc cagctccggg ctccgctttt gcctttatga
     5401 tctctgcttt aatggcacga agaccgcgta acgccgcttc gtcctttgct ttcatggcgt
     5461 ctttcatttc ggccattacc ttttgttcca ggttcatgtt tcttttttta tacagccacg
     5521 cgaagttgaa gatttttcac cacaaggcaa ttgcaacaac acgcaccaac aatgatggtt
     5581 agaatgtttt gctttcattc gtttccttaa gttgaaggtc ccgaaatttt ttatagaagt
     5641 ttttggcgaa ctccttcaat tcatctgtta gctcctgctg atgggtagcg cggttatacg
     5701 tatctgccat agtcatgagt gtttggtaaa aaaaatctgc catttcatcc accatcattt
     5761 cttttgtcca caggtcgata cgcatggcgg ttttttcttc accatcccaa aaagcgagca
     5821 ttagtccctt cgcctgctgc gtgtgttcaa ctgtagtgcc cgtggtattc cattcaattt
     5881 gctggggcac cttgtcttca tcgagcttta cctgtatcga gatcgtttgt ttttccataa
     5941 ctgtataaat agagttttaa tcgacacgat gctaagaaca tgccgcagtt tccaatattc
     6001 tccagaaccg catttcgtat tcattcctgt taagcaaagc agacatgttt tttcctgcct
     6061 cctttaatcg tgcatgcaga tcttcgtctt tgtaaagttg gatcatcgta gcagataaag
     6121 catcaacagt ttcatcctga acatacaccg cagcatcacc tgcatattca agtacatccg
     6181 gattatttag cgaaattaca ggcaaagcgc attgcagacc tgccgttaaa actacaagat
     6241 cgggatgcga tgcccacaat agcaccattc catacgccga ggcaagcacc gatgctacct
     6301 gggattcctc gaggtcttcg agcagccgaa catcctccct gtatttgtag gtctcgtgtt
     6361 tctggcggat gcccggacta aacgattcaa attttggcag tatcagcaat tgcatactgc
     6421 tttgctgcca cgctttgaat tttgtaaatg ctttgagcag cctcacaaaa acttcttccg
     6481 cttcgtcctc aagcacagca ataaaatact ctttgttatc cgcttgttgc gctttgatca
     6541 ttatcttttc gtgccactca aaagttctga atgccgacgg cggagtaaac gggatcactt
     6601 cgattttatt ttcgggtaca ttcttaaatg cagtggcctt atcagcagaa tgcacaatca
     6661 tcttcgacgc cttagaaacg gagtggggta attgctgttt tgcaaaatca attatacctc
     6721 tttgtttatc gccggcgaac accgtttcgg ggaaagcagt gatctttggc aaaattgttt
     6781 tcacaggcgt tataccgttc aaatcgagta ctgcttttgc gccgatcttt tttaggatcg
     6841 ctggcagctt aaccgcgtac caccagctca cggcaaaccg cgaatttgct tccatgataa
     6901 tataaacgac agcatcgtcg gggatgtatt gctgcgatgc cggtatagaa tagctccaca
     6961 cctttaccgc gaaatccttt tgcatagcct ggctgttgac cagggcagaa agatattccg
     7021 catagtcacc cgcctttata tgatgaacaa cggcaatgcg catggtgcgc aaaagtaatt
     7081 tgattaacca atcgctgtat atgaaaaacg gccgggtgag ctcagttaag cggcgattat
     7141 ttttacagca agttctttca ggatctcacc gtcgccggca ctgcctgaat atgcgttgtt
     7201 gatgccgatt cccttcaggt tgtattcatg aagcagtaga atgatctttt ccgcacctga
     7261 aaacccgtaa ttgttgatgg cgaccatcgc ttgttttact gcaaacggat tattataaaa
     7321 aagcggtttt aaaaattttt ctgatacatc gggcgtggaa gcagccatgt aaattttact
     7381 gaaatagttg tacaacgtag gcagtattaa ttgtaatggc cctgctttcg gattcgcctg
     7441 gaagtattgg atgatacgta ttgcctttgg aagatttttt tgactgatgg catcctgcaa
     7501 ttcaaaaaca ttgtagtctt tactgatgcc tatatatttt tcgatatccg cttccgtaat
     7561 attttttttg ctcgcgagat tgatcgaaag tttatccact tcatttttta gccggctcag
     7621 gtcgttgccg atgtgatcca cgagcaaaag cagcgcattg tgatttatgg tcagcccttt
     7681 tgattccacc atctgggatg tccattccgg caactggtta tcatagatct tttttgtggc
     7741 aagtacttcg ccattttgtt tgaggaactt tgaaagtttt gtcctggcat caagcttttt
     7801 gtccttataa ctcaccacaa aaagtgttga agacaagggg cgatgtatgt agttttccag
     7861 cttttcgatg tctttcattt gctgcccttc tttcagcagg accacctggc ggtcagaaaa
     7921 catgggatat cgcatgcagg catttacaac gtcaggccat tcgctgtcct tgccgtaaaa
     7981 aacggttagg ttaaaagctg cctctgtttc ggagagcaaa tgatgttccg cgtaatcaac
     8041 aacctcgtct atgaaaaaag gttcttcacc ttccagccaa taaacgggtt tgaatttttt
     8101 ctgtttccag tctgaaatta tcttctccgc agacatgctt caaagataag ggtcaggccc
     8161 cgcgctaaag agagaatttg tatcatctga aaagggaatt atttactttc atgcgcatga
     8221 aacgcttttt cgcagtactg gcctgtgcat tttttctgat cgatggacaa ggtcaatcat
     8281 ataaaaaaat tcattttaaa tctatccttt gcgatacgca caatgatatc ataagcacgt
     8341 gccttgaaaa aaattatcgg ttcgacgaag acctgaccgg caaaacgcat agcgatctca
     8401 atcgcatgtt caagggaggt atcgatgtac aggttttttc tgtttggtgc gacgaaacgc
     8461 ggcagcaacc atatcaattt gcaaatcgcg aaatagacac attatatgcc tggatcgctc
     8521 gtaatccaac caaaatgatg ctggttacca acagcgacga attatcgcgg
//
LOCUS       DASQJI010000877         2639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2914328,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000877 DASQJI010000000
VERSION     DASQJI010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2914328"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VEV83_22750"
     CDS             complement(<1..313)
                     /locus_tag="VEV83_22750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HYK48023.1"
                     /translation="MKLIRFGNVGNEKPGIMDSDNNRRDASHLFKDWDREFFQNKGLQ
                     ELRGVFKNVSSFPLVDQKERWAAPVARPGKVICIGLNYSDHAAESGMKLPTEPIVFQK
                     GA"
     gene            complement(444..1331)
                     /locus_tag="VEV83_22755"
     CDS             complement(444..1331)
                     /locus_tag="VEV83_22755"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HYK48024.1"
                     /translation="MGNSQTNIQTVLPYACMLGEGPVWDAEHKRILWLDITEGDIHQY
                     TLAQDAHKVFNVGEMIGSIALREGGGLVGGLEHGFAFIDPENEKVDHIADPEQGLSNR
                     FNDGKCDAAGRFWAGTMAISEEENKGNLYVLEADLSVKKKIENVSISNGIAWSADSSV
                     MYYINTPTNYVFAFDYNIEDATIDNQRVVLDLTHENGYADGMTIDEEGMLWVAYYGGW
                     RVARYDPNNGKLLRQIELPVANVTSCTFGGVDLTDLYITTAMKGLSEEELSSQPLAGC
                     LFVVKDCGYKGTATQKFKG"
     gene            complement(1334..2098)
                     /locus_tag="VEV83_22760"
     CDS             complement(1334..2098)
                     /locus_tag="VEV83_22760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK48025.1"
                     /translation="MFRLDRKVAIVTGGASGIGKAIANLFVQQGAVVYVLDLDDGGTS
                     LDEGVVDGRAHFLKCNVSNQAEVIDAVAEIYGKYKRIDILINNAGIAHIGTAETTSEE
                     DFDRLMSVNVKGVYNCLHAAIPYMQEQGGSIVNMASVAALVGLPDRFAYSTTKGAVIS
                     MTLSVAKDFLEYKIRCNSISPGRVHTPFVDGYLAKNYPGKEAEMFEKLSKTQPIGRMG
                     KPEEIAQLALYLCSDEASFITGCDYPIDGGFVKLNT"
     gene            complement(2226..>2639)
                     /locus_tag="VEV83_22765"
     CDS             complement(2226..>2639)
                     /locus_tag="VEV83_22765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYK48026.1"
                     /translation="GSFFLAQAAAKKIKAQEGGGSILLMSSVTGHQAHKNLAAYGMTK
                     AALEMLAKALVVELSEFNISINTIAPGATVTERTSQDQAYMDTWKRITPMGRAATVED
                     IANAALFMVSPASRHITGQSLVIDGGWTSVSPSPY"
BASE COUNT          678 a          713 c          494 g          754 t
ORIGIN      
        1 tagcgccttt ttgaaaaacg atcggctccg ttggaagctt catccctgat tctgcagcgt
       61 gatcggagta attcaaacca atgcatatca ccttaccggg ccgcgctacc ggtgcagccc
      121 aacgctcctt ttgatcaacg agcggaaatg aggaaacatt cttaaacact ccacgtaatt
      181 cctgcaaacc cttgttttgg aaaaattccc tgtcccagtc tttaaacaaa tgagatgcat
      241 ctctgcgatt attgtcacta tccattatac caggtttctc attaccaacg ttaccaaatc
      301 ttataagctt catatattat tttaaaatgt ttaaaaaaaa tttatgcgat caatatgccg
      361 tggttaattt accacagagt tacaggaggt ttgcacagat tttcgcagag ttttagatcc
      421 ccgtctattt ctattagcac atgctaaccc ttgaactttt gtgtggctgt tcctttgtaa
      481 ccgcaatctt tcacaacaaa taaacaccct gccagcggtt gcgatgaaag ctcttcttca
      541 ctcaaccctt tcattgcagt cgttatataa agatcggtca ggtcaacacc gccaaatgta
      601 caagacgtaa cattcgcgac cggcaattcg atttgtcgta aaagttttcc gttattcgga
      661 tcataccttg ctactctcca gccaccgtaa taggcaaccc ataacatgcc ttcttcatcg
      721 atcgtcattc cgtctgcata accattctca tgcgtaagat caagaaccac gcgctgatta
      781 tctatcgtcg catcctcaat attgtagtcg aaggcaaaca catagttcgt tggcgtgtta
      841 atgtaataca tcacggagct gtccgcgctc caggcaatgc cgtttgatat gcttacattt
      901 tcaattttct ttttaacgga aagatctgct tccagcacat acagattgcc tttgttctct
      961 tcttcggaga ttgccatcgt gcctgcccaa aaccgtcccg ccgcgtcaca tttaccatca
     1021 ttgaaccggt ttgacaaacc ctgctccggg tcagcgatgt gatcaacttt ttcattttcc
     1081 ggatcgataa atgcaaaccc atgttcaagc ccgccaacaa gtcctcctcc ttcacgcaat
     1141 gcgatcgaac cgatcatctc acccacatta aaaactttat gggcatcttg tgcgagagtg
     1201 tattgatgaa tgtcaccttc cgtgatatcg agccacaaga tccttttatg ctctgcgtcc
     1261 cacacgggcc cttcgccgag catgcatgca tacggcaaaa cagtttgaat atttgtttgt
     1321 gagttcccca cgtttacgta ttcaacttta caaatccgcc gtcaattggg taatcgcagc
     1381 ctgtgatgaa tgaagcctca tccgaacaca aatacaaagc caattgggca atttcctccg
     1441 gctttcccat gcggccgatc ggctgcgttt tcgaaagttt ctcaaacatt tctgcttctt
     1501 tgcccggata gtttttcgca agataaccgt ccacaaacgg cgtatgcact cgtcctggcg
     1561 aaatactgtt acaacgaatt ttgtattcca ggaaatcttt ggcgacagat aacgtcatcg
     1621 agatcactgc gccttttgtt gtgctgtatg caaaccggtc aggcaaacca acgagtgctg
     1681 caacggatgc catgttcaca atacttccac cctgctcctg catataaggt atcgcggcat
     1741 gcaaacaatt gtatacacct tttacgttca cactcatgag cctgtcaaag tcttcttccg
     1801 aagtagtttc agcggtgccg atgtgtgcga tcccggcatt gtttatcaaa atgtcgattc
     1861 gcttatactt gccgtaaatt tctgcaacgg catctatcac ttcagcctgg tttgaaacgt
     1921 tgcacttcaa aaaatgtgct ctcccatcaa caacaccttc atccagcgaa gtaccgccgt
     1981 cgtcgaggtc gagaacataa accacagcgc cctgttgtac gaacaaattt gctatggcct
     2041 ttccaattcc gctggcgccg cctgttacga tcgcaacttt tctatctaat ctaaacatgt
     2101 tgttggttta tctctgatct aaagatctcg gatctctgat taacgtttca aacatcatac
     2161 atcctacatc ctacatcata catcatagat cagacatcat acatcagaga tcctacatct
     2221 ggacatcaat acggcgacgg actcaccgat gtccacccgc cgtcaataac aaggctttga
     2281 cccgtgatgt gtcttgatgc cggcgaaacc atgaacaacg ctgcattagc aatatcttca
     2341 acggtcgcag ccctgcccat cggggtgata cgtttccacg tgtccatata cgcctggtcc
     2401 tggctcgttc tttccgtgac agttgcgccc ggcgcaatgg tattgatcga aatattgaat
     2461 tcagacaatt ccaccacgag tgcttttgcc aacatttcaa gcgcggcctt ggtcataccg
     2521 tatgccgcaa gatttttatg agcctggtgc cccgtcaccg acgacatcaa taaaatgctt
     2581 ccaccgcctt cctgcgcttt tatttttttc gccgcagcct gtgcaagaaa aaaacttcc
//
LOCUS       DASQJI010000878         8618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1993248,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000878 DASQJI010000000
VERSION     DASQJI010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8618
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993248"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VEV83_22770"
     CDS             complement(<1..192)
                     /locus_tag="VEV83_22770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008584341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase"
                     /protein_id="HYK48027.1"
                     /translation="METYGKILLIAMPIFLVLVLFEKWYGWYKGNDTVRGMDMLSSLS
                     SGVTNVTKDVLGLSITILTY"
     gene            complement(342..818)
                     /locus_tag="VEV83_22775"
     CDS             complement(342..818)
                     /locus_tag="VEV83_22775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012794729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYK48028.1"
                     /translation="MNKQHAYKATITWTGNKGTGTSGYRAYDRSHTISAENKADIAAS
                     SDPVFRGDKTRYNPEELLVASLSACHLLTYLHLCADSGVVVTDYFDNATGVMVETEGG
                     GGHFTEVILNPVVTVADASMIDKANELHEKAGELCFVAKSVNFPVRHNPVAQVGKV"
     gene            998..2938
                     /locus_tag="VEV83_22780"
     CDS             998..2938
                     /locus_tag="VEV83_22780"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK48029.1"
                     /translation="MPQTRQLAAIMFTDIVGYTSLMGADERKAFDILRKNRQLQKQII
                     ADFSGSWIKELGDGVLASFNTATNAVACAKNIQAACDDIADFKLRIGIHLGEVVFEDN
                     DVFGDGVNIAARLQALAPIGGIYMSETVFRNIENKEGMDTEFVKEVNLKNVKHPVKVY
                     ELRTNGKHAEESHHEAEFAKAASAVSEKSIAVLPFVNMSNDVEQEYFSDGISEEIINS
                     LVQVPELKVTGRTSAFSFKGKNEDLRLIGEKLGVSKILEGSVRRSGSRIRITAQLIEA
                     SNGFHLWSQKFDREFSDIFAVQDEISQAIAEQLRLKLIKPETVSVKNPAPDMESYNLF
                     LKGRFFWSKRTREGLKKSIEYFEAAIEKDPGYAPAYAAMSDSYSLLCAYHILAPEDSI
                     LKARSIAKKAAEIDPFLAEAYEAMGHVEFLYDWNWKKATEYYEKAIKLNSHYPTALQR
                     HALLLTLFNKVPQALEQIMQAVNNDPLSLVINTDVALIYFIQKNYQLAIEKCTTVLDI
                     DPNFILALFVTGLAHEQLNDLDVAITYFQRACDVYGENTIVKGALIHALGMAGRKAEA
                     EKLFEELMNLPGSLYISPYTVATAYLGLSKTNDALEWLEKAVDTRSVWLIHLHMKFDP
                     RLNVVRNHERFRTLLEKMSLDD"
     gene            3064..4263
                     /locus_tag="VEV83_22785"
     CDS             3064..4263
                     /locus_tag="VEV83_22785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HYK48030.1"
                     /translation="MRYQIFKICNVIIAFLFSCRSFAQEELLPPPAKFIATVPFTQLT
                     GGIMILHATFDDFKDTLNFVLDTGSGGISLDSLTCDYYHIPTVPSDKIVRGIAGMKYV
                     SFANDHTLHLQGMTVSGLDFHINDYEILTAAYGMRIDGIIGYSFFRRYIVAIDYDNMD
                     MKVYEPGTYKYPRGGYLLKPKFSNLAKQMVQVRDKADVTSQYYFDSGAGLCLLMTEDF
                     MNDNSIFSTKRKFFATQAEGLGGKAPMTLSLVKDVKVGPYRFHNVPVYILKDRFSVIS
                     YPDVSGLLGNDLMRRFNTVFNYPLQEIYIKPNKHYLDSFDYSYTGLGFYLINGAITVT
                     DIIKDSPAEKAGFKEGDIIIGVEANFSNNIQAYKVLLQAAKSKVRIVIMRNGQPLVIE
                     LKVRSIR"
     gene            complement(4594..5865)
                     /locus_tag="VEV83_22790"
     CDS             complement(4594..5865)
                     /locus_tag="VEV83_22790"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HYK48031.1"
                     /translation="MKTLIHRLHNYFIPVQYRIDEELFRKTRIFINATLITGAFAFFF
                     LLNTIAFEMPYHKWSMIVCFIVFFLLAFLLRWNVPLIFCANVFIGVAVAATFWDGFFL
                     GGLQSYDFVWICLAPVLAVMIIDKQAGWKWLIVAILVAIVMGVLQLTGYPFQTAINPA
                     DYHIHGLNALISLIVAMFAVVLVMQNAFEMSLIKLDQKNKIIEQEKERSDELILNILP
                     AEVVEELKETGHTKARNYDLVTVLFADFVNFTSIIEDLPPDELVSGIDEYFKMIDSIV
                     TRYDVEKIKTVGDAYICAAGLGTDTSDNPVKMIEVALEIVDAIHELNQERRAAQQVCF
                     EMRIGVHSGPVVAGVVGVKKFAYDIWGDTVNVAARMQQNGEPGKINISGMTRELIKHR
                     FNCFYRGKMQAKHKGLIDMYFVESRKIALEV"
     gene            complement(5865..6569)
                     /locus_tag="VEV83_22795"
     CDS             complement(5865..6569)
                     /locus_tag="VEV83_22795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48032.1"
                     /translation="MTIFEYLKEPHPWVDLNNYTWWQVAMFFTGSVLWLVCYIDTIRD
                     IRKKKTINIPIGCVVTNYGWEIAASTVFVPNMGKLLVVAYWAWMILDTYIFASTFRYG
                     YKQCLIPFFKNKIRFYLAIGIVVSFITQATFMVKYDIPMAPVSGDIINLYMSVAFLYL
                     LTIPGYEGNSLVTGWSKFLGTGIINLMFALKYPDNYFLISIGISCAVFDILYIVLLHR
                     KKAQPQAAMKLEMQMV"
     gene            complement(6566..8482)
                     /locus_tag="VEV83_22800"
     CDS             complement(6566..8482)
                     /locus_tag="VEV83_22800"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYK48033.1"
                     /translation="MSKKKVIIIGGGVAGMSAAHELIERGFDVQVFEKKIQLPGGKAR
                     SVNVPDPDAGDHYNPLPGEHGFRFFPGFYKHVTNTMSRIPFPGNKNGVLDNLVAAPHV
                     MLARSGAEPIVMLDSFPKTWDDFKVLLNSLHAHTGLTAEDEQFFATRVWQLMTSCRAR
                     RENDYERMGWWQYTDGEHRDKAYQDLLARGLTRTLVAARAATASTKTGGDIFLQLLFN
                     MGNPKIPTDRILNGPTNQQWLFPWHKFLVDKGVDYRFLSNVKKIDCENGMITGVWVEK
                     IKAEPDIFSEALPEKPEKYTADYYICAVPVEVAAPLFLSDILKPGETIHSFVNDVIKT
                     ADLSDPAVSIIDVLTDAIQKASIMKADPTLTGIVELSNDVSWMTGVQFYLNEAVTLNK
                     GHIIFSDSPWAITAIAQQQFWTGFPMSKYADGKTKSVLSCDVSDWDEPGVLYNKPAKE
                     CKAEEIKNEVWEQMKRSLVVNGKSLLNDEMIHTWFIDRDIEFTTPQLYKGDYLSKNTE
                     PLLVNKVDTWRLRPESYCAIPNLFLAADYVRTHTDLATMEGANEAARRAVNNIIEASG
                     SDAELCEIWDLHEPWEFAYYRYHDQRRYRKGLKWQQDFPWWVKLIQKLIAMFREGAKK
                     SSITKPALQTKKLP"
BASE COUNT         2369 a         1989 c         1915 g         2345 t
ORIGIN      
        1 ataggtgagt atcgtaatgc tcaggcccaa aacatccttt gtaacattcg taactccact
       61 gctcaggctg ctgagcatgt ccattccacg cacggtatcg tttcctttgt accagccata
      121 ccatttttca aaaagcacca acacaagaaa tatcggcatc gcgatcaaca gaatcttccc
      181 gtaggtctcc ataaaaaaac taagtggttt aacagcaagc aataagcgag caaaattaac
      241 gataactttc aagaagttgg atatcggtct gacgattgca aagcgtccca ccgtaatgac
      301 cttttcaatc gcgactgtca ggaccgtgca acatctgacc atcacacttt tccgacttga
      361 gcaaccgggt tgtgacgcac cggaaaattt accgatttgg caacgaagca gagttcccca
      421 gccttctcat gcagttcatt agccttgtcg atcatcgacg catcagcgac ggtaacgaca
      481 ggattgagga tcacttcagt aaagtgtcct ccgccacctt cagtttcaac cataacgccg
      541 gttgcgttgt cgaaataatc agttacgacc acaccggaat ctgcacaaag atgcaggtag
      601 gttagtaagt ggcaggcgga cagcgaggcc accagcagtt cctcgggatt gtatcttgtt
      661 ttgtcgccgc gaaaaacggg gtcagatgaa gcggcaatgt cagctttatt ctcagcggaa
      721 atcgtatggc ttctgtcata agccctgtac ccggatgtac ccgttccttt atttcctgtc
      781 catgtgatag ttgctttgta tgcgtgttgc ttgttcatgc gattagattt ggaagattgc
      841 gtttgataat gcaatttaat caaacgcctg tagctattta ccatctgcac gcctgggcga
      901 attttgcact taactcatta ttcatcactc atcattcatc ctcatcattc atcccaccat
      961 tctgcccagt ttcattatct ttagtcgcct gaattttatg ccgcaaacac gacagctagc
     1021 agcaattatg tttaccgata ttgtcggcta cacatcttta atgggtgctg acgaaagaaa
     1081 ggcatttgat atccttcgca aaaaccggca actgcaaaaa cagatcatcg ctgattttag
     1141 cgggtcgtgg atcaaagaat tgggtgacgg agtattagcc agctttaata ctgcgacgaa
     1201 tgcggttgca tgcgcaaaga acatacaggc cgcatgtgac gacatcgctg atttcaaatt
     1261 gcgcatagga attcatcttg gggaagttgt gtttgaggac aacgacgtgt ttggcgacgg
     1321 cgtgaacatc gccgcccgtt tacaggctct tgcgccgatt ggcggtattt acatgtctga
     1381 gacagttttc agaaatattg aaaacaagga aggcatggat actgagtttg tcaaagaagt
     1441 aaacctgaaa aatgtaaagc acccggtaaa agtttacgag ctcagaacga atggcaaaca
     1501 tgctgaagaa agtcatcatg aagcagaatt cgcaaaggca gccagcgcag ttagtgaaaa
     1561 gtcgatcgct gtacttccgt ttgtgaatat gagcaatgat gttgaacagg aatattttag
     1621 cgatggcatc tccgaagaga tcattaattc tttggtacag gtgcccgagt taaaagtcac
     1681 cggccgtaca tccgcttttt ctttcaaagg caagaatgaa gatttgcgac tgatcggcga
     1741 aaagctcggc gtgagcaaga tcctggaagg gagtgtaagg cggtccggaa gtcgcattcg
     1801 tatcacggct cagcttatcg aagcgtcaaa tggctttcat ttgtggtcac aaaaatttga
     1861 ccgcgagttc agcgacatat tcgcagtaca ggacgaaata tcccaggcga ttgcagaaca
     1921 gttaaggctt aagttgataa agcctgaaac cgtatcggta aaaaatcctg cacccgatat
     1981 ggagtcgtac aatcttttcc taaaaggccg ttttttctgg agcaagcgca cacgcgaagg
     2041 cctgaagaag agcatcgaat attttgaagc agccattgaa aaagatccgg ggtatgcgcc
     2101 ggcatacgct gctatgtcgg acagttattc tttgttatgc gcgtatcaca tattagcgcc
     2161 tgaagactcg atattgaagg cccgttcgat cgcaaaaaaa gctgcggaga tcgatccgtt
     2221 tcttgctgaa gcttatgagg cgatgggaca cgtggaattt ctttacgact ggaactggaa
     2281 aaaagcaact gaatattacg aaaaagcgat caagctcaac tcacattatc cgactgcctt
     2341 gcagcggcat gctttgttgc tgacgctttt caataaagtg ccgcaggcgc ttgaacaaat
     2401 tatgcaggct gttaataatg accctctttc gctggtgatc aatacagacg tggcccttat
     2461 ttattttatt caaaaaaatt atcagctcgc aattgaaaag tgcacaactg tactcgacat
     2521 cgatccaaat tttatactcg ccttgtttgt aaccggctta gcgcatgaac aattgaatga
     2581 tcttgatgtt gcgattacat attttcagcg ggcttgcgat gtttacggtg agaacacgat
     2641 cgtaaagggc gcgctcattc atgcacttgg aatggctggg cgtaaagcgg aagctgagaa
     2701 gttatttgag gaattaatga accttcccgg ttcgctttat atttcgcctt acaccgttgc
     2761 gaccgcatac ctcggtttaa gcaaaacgaa tgatgctctc gaatggcttg aaaaagcggt
     2821 tgacacgcgc tccgtttggc tgattcacct ccacatgaaa tttgatcccc gcttaaatgt
     2881 agttcgcaac cacgaaaggt ttagaaccct tcttgaaaag atgagcttag acgactaggt
     2941 atgttccaca aaaagtataa cagctagcgc tcatcaattt atatttgtcc tcagtaagaa
     3001 acgattgcat tttttcagcg aatggatgta tactgcagcc ggataagaac ttaaaaattg
     3061 aacgtgcgat accaaatatt caagatttgt aacgtcatca ttgcattttt gtttagctgc
     3121 agatccttcg cacaggaaga gctgctgcct ccaccggcaa aattcatagc gacggttccc
     3181 ttcacacagc tcactggcgg catcatgatc ctgcatgcaa cgttcgacga ttttaaagac
     3241 acgctcaact tcgtgcttga caccgggagt ggtggcattt cactcgattc cttaacgtgt
     3301 gattattacc acataccgac agtcccgagc gacaagatcg tgcgcggcat cgcaggcatg
     3361 aaatacgttt cgttcgccaa cgaccacacg ctgcaccttc aggggatgac ggtttcagga
     3421 cttgattttc atatcaacga ttatgagata ctcaccgcgg cttacggcat gaggatcgat
     3481 ggcattattg gctacagctt ttttcggaga tatatcgtag ctatcgatta cgacaacatg
     3541 gacatgaaag tttatgaacc gggcacttac aaatatccca ggggcggtta tcttctaaag
     3601 ccgaaatttt ccaacctggc taaacaaatg gtgcaggttc gcgacaaggc tgatgttacg
     3661 agtcagtact acttcgacag tggcgctggt ctgtgcctgc taatgaccga ggatttcatg
     3721 aatgacaatt cgatattcag cacaaaaaga aaatttttcg ccacgcaggc ggaaggactg
     3781 ggaggcaaag cgccaatgac tctttcgctt gtgaaagatg ttaaggtagg tccgtatcgt
     3841 tttcacaatg ttccggttta cattctgaaa gaccgcttta gcgtgatctc gtacccggac
     3901 gtgagtggcc ttttgggaaa cgaccttatg cgccgtttca atacagtttt taattatccc
     3961 ctacaggaaa tatacatcaa gccgaacaag cattatctcg actctttcga ttattcttat
     4021 acaggtcttg gattttacct catcaatggc gcgataactg tcaccgatat catcaaagat
     4081 tctccggcag aaaaggcggg ttttaaagag ggcgatatca tcatcggcgt ggaagcaaac
     4141 ttttcaaata acatccaggc ttataaggtg ctgctccagg cggcgaagag caaggtgcgt
     4201 atcgttatca tgcgcaatgg gcaaccgctg gtcatagagc tgaaagtgcg aagtatacga
     4261 tagatacatt tatccaattc gagctcggag taacaccagc aaatttttat tattgactga
     4321 ggtcgacctc gctttctatt gtgtttaaat atcgcacaaa gggaattgtc acttgcccgg
     4381 ttaatctgtg gcattaaaaa ttaaaggtcc gtgaatgttc aacttagtga aacttcgtgg
     4441 cttcgggcct tcgtggtttc tatttttaaa ccacaagtcc caaacaatac acaaagaagg
     4501 cagaacgaag aaaaataagc tggcacttta ggataaaaca acacaacact taaagctact
     4561 tcctggaacc accggaattc acttgatcca acttcaaact tcaagcgcaa tttttctgct
     4621 ttctacgaag tacatatcga taagcccttt gtgtttcgcc tgcatcttac cacggtaaaa
     4681 acaattgaag cggtgcttta taagttcgcg ggtcattcct gaaatattta tttttcctgg
     4741 ttcgccattt tgctgcatgc gtgctgcgac gtttaccgta tcgccccaaa tgtcgtaagc
     4801 aaacttcttc acacccacaa cccccgcaac caccgggccg gaatgcacgc ctatgcgcat
     4861 ttcaaaacac acttgctgag ccgctcttct ttcctggtta agttcatgaa tggcgtcaac
     4921 gatttcgagg gcaacttcga tcatcttaac cgggttatcg cttgtatcgg tgccaagccc
     4981 ggccgcgcag atataagcat ccccgacggt cttgattttt tcaacgtcat atcttgttac
     5041 aatgctgtcg atcatcttaa agtattcatc gatgcccgac accagctcgt cgggagggag
     5101 gtcttcaatg atgcttgtaa aatttacaaa atctgcaaac agcactgtta caaggtcata
     5161 gtttcttgcc ttcgtatgcc ccgtttcttt tagttcttcc actacttccg ccggaagaat
     5221 attcagtatc agctcatcgc ttcgttcttt ttcctgttcg attattttat ttttctgatc
     5281 gagttttatg agcgacatct caaaagcgtt ttgcataacc aggacaactg cgaacatggc
     5341 tactatcaat gagatgagcg cattcagtcc atgaatatga taatcggcgg gatttatcgc
     5401 cgtctggaac gggtacccgg ttaattgcag aacacccata acgatcgcga ccaggatggc
     5461 cacgataagc cacttccagc ctgcttgttt atcgatgatc atcaccgcga gtaccggtgc
     5521 aagacatatc cacacgaaat cataactctg caagccgccg agaaaaaatc catcccagaa
     5581 tgtggcagcg acagctactc cgataaatac gttggcacaa aaaataagcg gcacgttcca
     5641 tcgaagcagg aaggccagga gaaaaaaaac gataaaacaa acgatcatgg accatttgtg
     5701 ataaggcatt tcaaaagcta tcgtgtttaa caagaagaag aacgcgaatg cgccggtgat
     5761 cagggtggca tttatgaaga tgcgtgtctt gcgaaagagc tcttcatcga tacggtattg
     5821 aactggaatg aagtaattat gcagcctgtg tataagtgtc ttcattatac catttgcatt
     5881 tcaagtttca ttgctgcctg cggctgtgcc tttttcctgt gtaacaaaac gatgtacagt
     5941 atatcaaaca ccgcacaaga gattccaatc gaaattagga aataattgtc cgggtatttt
     6001 aaagcgaaca taaggttgat gatgccggtg ccgagaaatt tgctccatcc tgttacaagt
     6061 gaatttcctt catatccagg tatcgtaagt agataaagga acgcgacgga catataaagg
     6121 ttgataatgt ctcccgaaac cggggccatg ggaatgtcat acttcaccat gaaggttgct
     6181 tgagtaatga atgagaccac tatgccgata gcgagataga agcgaatttt gtttttgaag
     6241 aacgggatca aacattgttt atatccatac ctgaatgtgg aagcaaaaat gtacgtgtca
     6301 agtatcatcc atgcccagta ggccacgaca agcagtttgc ccatattcgg cacaaaaaca
     6361 gttgacgctg ctatttccca tccataattg gtaacgacgc agccgatagg tatgttgatc
     6421 gttttctttt tcctgatatc ccttattgta tcgatataac aaacaagcca aagcacagag
     6481 ccggtaaaaa acatggcgac ctgccaccag gtgtaattgt tcaggtcgac ccacgggtga
     6541 ggctccttca ggtactcgaa tattgtcatg gtaatttttt tgtttgcaac gcaggttttg
     6601 taatagatga tttttttgca ccctctctaa acatcgcgat cagcttttgg atcagcttca
     6661 cccaccatgg aaaatcctgt tgccatttaa gtcccttcct gtatcggcgc tgatcatgat
     6721 aacgataata agcaaattcc cacggttcat gcagatccca gatctcgcaa agttccgcat
     6781 cgctacctga cgcctcaatg atattgttta ctgcccggcg cgctgcttca ttcgcccctt
     6841 ccatggtggc gaggtcagtg tgtgtgcgga cataatctgc tgcgaggaac aaatttggaa
     6901 tagcgcaata agattccggc ctcaaccgcc acgtatcaac tttattcacc agcaaaggct
     6961 cggtgttctt gctcaaataa tcgcccttgt ataactgcgg ggtggtaaat tcaatgtcgc
     7021 ggtcgatgaa ccatgtgtgt atcatctcat cattgagcaa actttttcca ttcaccacca
     7081 acgacctttt catctgttcc cacacttcat tttttatttc ctcagcttta cattctttcg
     7141 caggcttgtt gtataaaacg cctggttcat cccaatcaga aacatcgcag gacaaaacag
     7201 attttgtctt gccatctgca tacttgctca ttggaaagcc tgtccagaat tgctgctgcg
     7261 cgatagcagt gatcgcccag ggactatcag aaaaaatgat gtgtccttta ttcagagtca
     7321 cggcttcatt caaataaaat tgcacgccgg tcatccacga tacatcattt gataattcca
     7381 caatgcctgt gagtgtagga tctgctttca tgatggaggc tttctgaatc gcgtcggtga
     7441 gcacatcaat gatcgacacg gcagggtcag aaagatcagc tgttttgatc acatcgttca
     7501 caaaactgtg aatcgtttca cctggtttca aaatgtcaga caaaaataaa ggagcggcta
     7561 cttcaaccgg cacagcgcat atataataat cagcagtata cttttcaggt ttttcgggaa
     7621 gcgcttctga gaagatatca ggttcagctt ttattttttc aacccaaacg ccggtgatca
     7681 ttccgttctc gcagtctatc ttttttacat tcgagagaaa gcggtaatcg acgcctttgt
     7741 cgacgagaaa cttatgccag ggaaaaagcc attgctggtt agtagggcca ttcaaaatgc
     7801 ggtctgttgg tattttggga ttgcccatgt taaacaacaa ttgcaaaaaa atatcgccgc
     7861 cagtctttgt acttgcagtt gccgcgcgtg ccgcaacgag cgtgcgtgtg aggccgcgcg
     7921 cgagcaagtc ctggtaggct ttgtcgcgat gttccccatc tgtatattgc caccagccca
     7981 tgcgttcgta atcgttctcg cgtcgtgcac ggcaactcgt cattagttgc cagacgcgcg
     8041 tggcaaaaaa ttgttcatcc tctgcggtca ggccggtgtg cgcatgcaac gaatttagca
     8101 gcactttaaa atcatcccag gtttttggaa agctgtcaag catcacgata ggctcagcgc
     8161 ctgagcgtgc gagcatcacg tgcggtgccg caaccaaatt gtcgagcaca ccatttttgt
     8221 tccccgggaa ggggatacgg ctcatcgtat ttgtgacgtg tttataaaat cccggaaaaa
     8281 atctgaaccc atgttcacca ggcaacggat tataatggtc gcccgcgtca ggatcgggaa
     8341 cgttgacact tcttgctttc ccgccgggaa gctggatctt tttttcaaaa acctgcacgt
     8401 caaagccgcg ctcaataagt tcgtgggcag cgctcattcc ggcaacgccg ccgccgatga
     8461 tgataacttt ctttttcgac attgatgttt ggtcgtttcg ctaagtaatt agtggtgtat
     8521 cacggacaac gagtcaaatt taataaaaca aaaactgctt caacaaagaa gattcgtttg
     8581 caaattttat cgtgcgtatt ggttatgtgc cggatttt
//
LOCUS       DASQJI010000879         7117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_609466,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000879 DASQJI010000000
VERSION     DASQJI010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 7117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7117
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609466"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1398
                     /locus_tag="VEV83_22805"
     CDS             <1..1398
                     /locus_tag="VEV83_22805"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYK48034.1"
                     /translation="AWMSILRKGYESWADTLFSLQERADKDFYTAQMKKFSSDVPAHV
                     LIMHARLFESSTATVKNDMSVEIGGGKIIAVYPSAKDKTLPAGQVIDAKGKFLMPGLW
                     DMHAHYSKDEGAWYLAGGVTHVRDMGNANIIFTYKQEIAANEMLGPDVSYISGFIDKQ
                     DYYQGPTGKIVASLDEAIKAVDEYHELGCGQIKLYSSIKPEWVAPIAAHAHSLGMRVA
                     GHIPAFMTAEEAIKAGYDEITHINFVFLNFMGDTIDTRGPTRFRVVGDRAGKIDLNSD
                     DVKHFISLMKQKKISFDPTMNVFAGMFAEFKGDTSGSMKPVISWLPDRVKSDLSIQTP
                     FGNDEQKPAYQLTFNNMQKMLKLLYDNGVLLVAGTDGGEAIALHHELEIYVQSGIPAN
                     EALKIATYNAALDCGLQDKYGQILPGRDADLILIDGDPAQNISDVRRVEWVIKNGKMY
                     SPKQLLASQGWKYYY"
     gene            1566..2717
                     /locus_tag="VEV83_22810"
     CDS             1566..2717
                     /locus_tag="VEV83_22810"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014221178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HYK48035.1"
                     /translation="MRPIQMVDLKKQYHELKNEIDSAVLDVFESSAFINGKPVQQFCD
                     ALAAYLGVKHVVPCANGTDALQIAMMALDLQPGDEVITPSFTYIATTEVVALLRLKPV
                     FVEVDKETFNIDADALQKAITPKTKAIVPVHLYGQSCDMESIMRIANENNLFVIEDNA
                     QSIGGDFYFKDGTSKKTGTIGTIGTTSFYPAKNLGCYGDGGAIFTDDDALADHMKMIA
                     NHGQSKRYYHDVVGCNSRLDTVQAAILNIRLKHLDENITGRRKAADHYDKAFAEHTII
                     KPPYRAANNKHVFHQYTITLDSEQGASLRDGLSNYLSEKKIPNMIYYPVPGHRQKMFE
                     AFGGLEYDLPITDWLTERVISLPMHPDLDEEQLEFITTAILEYFQVAYK"
     gene            2747..5425
                     /locus_tag="VEV83_22815"
     CDS             2747..5425
                     /locus_tag="VEV83_22815"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018628667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HYK48036.1"
                     /translation="MEPGKNFNHRDAEGKWYAHWLDKKYFNSYPDDREPYTIVMPPPN
                     VTGVLHMGHCLNNTIQDILIRHARTHGKNACWVPGTDHASIATEAKVVQMLRERGISK
                     SSIGREEFLKYAWEWRETYGGIILEQLKKLGCSADWNRTTFTMDDHYYRSVMKVFVDL
                     YDKGCIYRGQRMIHWDVKAKTALSDEEVIYREVQSKLYYVRYTVLQETNIGLHDISPS
                     ASRDITIATVRPETILGDTAICVNPKDERYKDFIGKFALVPLINRRIPIIADEYVSMD
                     FGTGALKVTPAHDMNDYQLGKKHNLEIVDVLNDDGTMSEAAQLFIGEDRFEARRKMVV
                     ELKAANHLVRVDDYTNQIGFSERSDAVVEPRLSMQWWLSMKKLSEPALKAVVEESIKF
                     FPSKYKNTYSYWMENIRDWCISRQLWWGQRIPAWYDEGGNIYVAESLDDLHRRQPSTV
                     NLQLRQDDDVLDTWFSSWLWPIEVFRGISNPASADLKYYYPTQTLVTAPEIIFFWVAR
                     MIMSGFEYENEKPFSNVYFTGIVRDEQGRKMSKQLGNSPDLLGLIDKYGADAVRFGII
                     ISSPAGNDLLFDVRAESTLKQGSFFINKIWNAMKLVKMWEKRQEQVSFQSPVAGDRQL
                     ATGNFPVTWFENRLNEVKTEIERLYEQFRLSEVLKTVYSLIWDDFCSWYLEWIKPGFE
                     EDIDRNVYSTTIEFFEELMQLLHPLMPFITEEVYHLLGEHDDDICVKQSSGIVDPDRE
                     VLNQGELLKRVITSIRDARNKNNIKPKEIITLHIQAEDATPYKLFERILQKQVNAEQI
                     NYAGESVSGCIVVAIEKDKFFIAAEQLADTSALKADLEKDLAYQKNFLQSIEKKLSNE
                     RFVQNAKPEVVEFERKKKADTEARIRTIEESLQNLN"
     gene            5518..6135
                     /locus_tag="VEV83_22820"
     CDS             5518..6135
                     /locus_tag="VEV83_22820"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYK48037.1"
                     /translation="MKPVFSSLKGILLIGCFFIFKPCSAQNWDIDLLRSINPENPGSG
                     VWKAATNSAYPISIATPLVIWTDAKLKHNKANEYSAYTVAGSIIIAAAATEAMKIIFD
                     RARPYEKYTGVYPYKVEEGKSFPSGHASLAFANATSLSLQYKKWYVVVPAYVWAAGVG
                     YSRLYLGAHYPTDIIGSAVTGAGSALLSNWISKKIFHAPKLKAAN"
     gene            6157..6660
                     /locus_tag="VEV83_22825"
     CDS             6157..6660
                     /locus_tag="VEV83_22825"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYK48038.1"
                     /translation="MKEHSDIKVREATKSDIAAIRSLANDTWPVTYKDILSDGQLRYM
                     MELIYGEESLNKQFDLGHRFLIAEESQNQLAFASYNMLKPGVYKLQKIYVLPSEQGRG
                     LGKLLINHIIESIKQEGATSLLLNVNRYNTAKHVYEHLGFTVIGEEDIDIGEGYFMND
                     YVMEKKL"
     gene            complement(6798..>7117)
                     /locus_tag="VEV83_22830"
     CDS             complement(6798..>7117)
                     /locus_tag="VEV83_22830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HYK48039.1"
                     /translation="SAGALEQLQVCRVSSLLKAVDDLHLNGIKIFSSEMHAKQRLHEL
                     DLCEPCCIIMGNEEKGVQGYLSKAADAHFSIPMKGQFDSFNVSVAAGIILYEAMKQRM
                     FEV"
BASE COUNT         2110 a         1461 c         1742 g         1804 t
ORIGIN      
        1 gcgtggatgt cgatactgag gaaaggatac gaatcatggg ctgatacttt attttctttg
       61 caggagcggg ctgataaaga tttttatacc gcgcagatga agaagttttc ttctgatgtt
      121 cctgcacatg ttttgatcat gcatgccagg ctttttgagt cgtcgactgc aacggtgaag
      181 aacgacatga gtgttgaaat aggtggcggg aaaataattg ctgtatatcc atcggcgaaa
      241 gacaagactc tgccggccgg ccaggtaatt gacgcgaaag gaaaattttt aatgcccggc
      301 ttgtgggata tgcatgcaca ttacagcaaa gacgaaggcg cgtggtatct cgccggcggt
      361 gttacgcatg ttcgtgatat gggtaatgcg aacatcatct tcacttacaa acaggagata
      421 gccgcaaatg aaatgctggg tccagacgtt agttatatct caggctttat tgataaacag
      481 gattattacc agggacccac cggcaaaatt gtagcctctc ttgatgaggc gataaaggcc
      541 gtggatgaat atcacgaatt gggttgcgga caaatcaaac tgtatagttc gatcaaaccc
      601 gaatgggttg cgccgatcgc tgcgcatgca catagtttag gcatgcgcgt ggccggacat
      661 atccctgcgt tcatgacggc tgaagaggcg atcaaggcgg gctatgatga gatcacacac
      721 atcaatttcg tcttcctaaa cttcatgggt gatacgatcg atacaagagg ccctacgcgt
      781 tttcgggttg ttggggacag ggctggaaaa atcgatttga attccgatga cgtgaaacat
      841 ttcatatcgt taatgaaaca aaagaaaatt tcttttgatc cgacgatgaa tgtttttgcc
      901 gggatgtttg ccgagtttaa aggcgataca agcggtagta tgaagccggt catcagttgg
      961 ttgccggatc gtgtgaaaag cgatctttct attcaaacgc catttggcaa tgacgaacag
     1021 aagcctgcgt atcagttaac atttaacaac atgcaaaaga tgctaaagct tttatatgat
     1081 aacggtgtct tgctggttgc aggtacggat ggcggcgagg caatcgcgct gcatcatgag
     1141 ctcgagatct atgttcaatc cggaattccg gcaaatgagg ctttgaagat cgcaacttat
     1201 aacgccgcgc ttgattgcgg cctgcaagac aaatatgggc agatattacc gggacgcgac
     1261 gctgatctta ttttgatcga cggagatcct gcgcaaaaca tcagcgatgt acggcgggtt
     1321 gagtgggtga tcaagaacgg taaaatgtat tcgcccaaac aattgcttgc atcgcaggga
     1381 tggaagtact attattgaga atgagaaata agaagtaaga aataagaagt aagaaataag
     1441 aaataaggga gtgaggcgcc tctgtgagca tgtctccgcc tggaaattgc aatctgcaat
     1501 ctaaaatctg caatctgcaa taggaatcct ccatctttcg ctacttttgc ccgcaaattt
     1561 tttccatgcg gccaatacaa atggttgatc tgaaaaagca gtatcacgaa ttaaaaaatg
     1621 agatcgacag tgcggtttta gatgtgtttg aaagttctgc tttcatcaat ggcaaaccgg
     1681 tgcagcaatt ctgcgacgcg cttgctgcgt accttggtgt aaagcacgtt gttccatgtg
     1741 cgaatggcac tgatgcacta cagatcgcca tgatggccct cgatcttcaa cccggcgatg
     1801 aagtaattac tccatcattt acttacatcg caacaacaga ggtggttgcc ttgctgcgat
     1861 tgaagccggt ctttgttgaa gtagataaag aaacattcaa tatagacgct gacgctcttc
     1921 aaaaagcgat cactccaaaa acaaaagcga tcgtgcctgt gcatctgtat ggtcagagtt
     1981 gcgatatgga atcgataatg cggatcgcaa acgagaacaa tttgtttgtg atagaagaca
     2041 atgctcaatc aataggcggt gatttttatt ttaaagatgg cacatcaaaa aaaaccggaa
     2101 ccattggcac gatcggcaca acgtctttct accccgcaaa aaacctgggt tgttatggcg
     2161 atggcggcgc catattcacc gacgatgatg cgcttgcaga tcatatgaag atgatcgcaa
     2221 accatgggca gagtaaaaga tattatcatg atgtggttgg atgcaattca agacttgaca
     2281 ctgtgcaggc agccattctc aatatcaggc tgaaacatct cgatgaaaat attaccggca
     2341 gaaggaaagc ggctgatcat tatgataagg cttttgcaga acatacgatc attaaacctc
     2401 cgtatcgcgc tgcgaataac aagcatgttt ttcatcaata cacgatcaca ctcgattctg
     2461 aacagggtgc ttcgttgcgc gacgggctga gcaattattt gtcggagaaa aaaattccga
     2521 acatgatcta ttatccggtg ccgggccacc ggcaaaaaat gtttgaagca tttggcggcc
     2581 tcgaatatga tctgccgatc acagactggc tcaccgaaag agttatctca ttgcccatgc
     2641 atcccgacct ggatgaagag cagttggaat ttattaccac ggccatactc gagtatttcc
     2701 aggtcgcata caagtgaatt gttggattta attttgaaat ttaagcatgg aaccgggaaa
     2761 gaattttaat cacagggacg cagaagggaa atggtacgca cattggcttg acaaaaaata
     2821 tttcaacagc tatcccgacg atcgcgaacc ttacacgatc gtaatgcccc ctccgaatgt
     2881 tactggcgtg ctgcatatgg ggcactgcct gaacaatacc atccaggata ttttgatacg
     2941 acatgcgcgt acgcacggca aaaatgcgtg ctgggttccg ggtacagatc acgcttcgat
     3001 tgcaactgag gcgaaagtgg tacaaatgct tcgcgaacga ggcatttcaa agtcatcgat
     3061 tggacgtgaa gaatttttga aatacgcatg ggaatggcgc gagacttatg gcggaatcat
     3121 tttagagcag ttaaaaaaat taggatgctc cgccgattgg aaccgcacaa ctttcaccat
     3181 ggatgaccat tactatcggt cagtgatgaa agttttcgtg gacctttatg ataaaggctg
     3241 catatatcgt ggtcaacgca tgatccattg ggatgtaaaa gcaaagacag cattaagcga
     3301 cgaagaggtg atctaccggg aagttcaaag taagctgtat tatgtgcgtt acacggtcct
     3361 gcaagaaacg aatattgggt tgcatgacat ttcgccctcg gcgtcaagag acattacgat
     3421 tgcaactgta cgccccgaga cgatcctcgg agatactgca atttgcgtta atccaaaaga
     3481 cgaacgttac aaagacttca tcggaaaatt tgcgctggtg cctttgatca accgccgtat
     3541 tcctattatc gcagatgaat atgtgtccat ggactttggt actggcgcat tgaaggttac
     3601 gccggcgcac gacatgaacg attaccagct cggcaaaaaa cacaatcttg aaatagttga
     3661 tgtcttgaat gacgatggca cgatgagtga agctgcgcaa ctatttattg gcgaagacag
     3721 gtttgaagcg agaaggaaaa tggttgttga actaaaggcg gcaaatcacc tcgtgcgtgt
     3781 ggacgattac acaaaccaga ttggctttag tgaaagatca gatgcagttg ttgaaccgag
     3841 gctcagcatg caatggtggc taagcatgaa aaaattaagc gagcctgcac tcaaagcggt
     3901 agtcgaagag tcgataaaat ttttcccttc aaaatacaaa aacacgtaca gctactggat
     3961 ggaaaacatc agggactggt gcatcagccg ccagctctgg tgggggcaac gaattcctgc
     4021 atggtacgac gaaggaggta acatctacgt ggcagaatcg ctggacgatc tgcatcgccg
     4081 tcaaccgtca actgtcaacc ttcagctcag acaggatgac gacgttctcg acacgtggtt
     4141 ctcttcgtgg ctttggccaa tagaagtttt ccggggcatc tcaaatcccg caagtgcaga
     4201 tcttaaatat tattatccaa cacaaacgct ggtcaccgcg cctgaaatta tttttttctg
     4261 ggtcgcgaga atgatcatga gcggattcga atacgagaac gagaagcctt tcagcaatgt
     4321 ttattttaca ggtattgtac gagatgaaca gggaagaaaa atgagcaagc agttgggtaa
     4381 ttctccggat ctgcttggac tgatagacaa atatggagcg gacgctgttc gttttggaat
     4441 aattatttca tcgcccgcgg gaaatgacct gctgtttgat gtaagagcag aaagcacatt
     4501 gaagcaggga agttttttta tcaataagat ttggaacgcg atgaagctgg taaagatgtg
     4561 ggagaagagg caagaacagg tcagtttcca gtcgccggtc gccggtgacc ggcaactggc
     4621 aaccggcaac tttccggtca cctggtttga gaacaggtta aatgaagtga agacggaaat
     4681 tgaaaggttg tacgaacagt tccggttgag cgaagtgttg aagacagtat actcattgat
     4741 atgggacgat ttctgtagct ggtatcttga atggatcaaa ccgggttttg aagaagatat
     4801 tgacaggaac gtttattcaa caacaatcga gttttttgaa gagctgatgc agttgctgca
     4861 tccattgatg ccattcatta cggaggaagt ttatcacctg ttgggcgaac acgatgatga
     4921 tatctgcgtg aagcaatctt ccggcatcgt tgaccccgat cgggaagtgc taaaccaggg
     4981 agaattgcta aagcgcgtga tcacatctat tcgcgacgca agaaataaaa acaacatcaa
     5041 gccgaaagaa atcataacac tccacatcca ggccgaagat gcgacaccgt ataaattatt
     5101 cgaacggatt ttgcaaaaac aggtaaatgc cgaacaaata aactatgccg gcgaaagtgt
     5161 gagtggctgt attgtagtgg caatagaaaa ggataaattt tttatagcag cagaacaact
     5221 ggctgacacc tctgcattaa aagctgatct cgaaaaagac ctggcttatc agaaaaattt
     5281 tcttcagtcg atagaaaaaa aactgagcaa cgagcggttc gttcaaaatg caaagcctga
     5341 ggttgttgaa ttcgaaagaa agaaaaaagc cgatacggag gcccgcataa gaacaatcga
     5401 agaaagtttg caaaatttga attaaagtaa agttagttat tcagagaggt ctcactggcg
     5461 ttcgacatga cgctcgtcgt catttcgagt gaaacgagaa atctcaaacg ggtgcatatg
     5521 aaaccagttt tcagttctct aaaaggcatt cttcttatcg gatgcttttt tattttcaag
     5581 ccgtgctccg ctcaaaactg ggatattgac ctgttgagaa gtatcaaccc tgagaatccg
     5641 ggttcaggtg tatggaaggc tgcgacaaac tcagcctatc caataagcat agcaactccg
     5701 ctcgtgatct ggacagatgc taagctcaaa cacaataagg cgaatgaata cagcgcttat
     5761 acagttgcag gcagcataat cattgcagca gccgcaacag aagcgatgaa aatcattttt
     5821 gatcgtgcgc gcccttatga aaaatacacc ggcgtatatc cgtacaaggt ggaagaagga
     5881 aagtcgtttc cttccggcca cgcgtcgctt gcctttgcaa acgcgaccag cttatcgctt
     5941 caatacaaga agtggtatgt ggtagtgccc gcatatgttt gggctgccgg cgttggatat
     6001 tccagactgt atttaggcgc gcattatcca acggatatta ttggctctgc tgtcaccggt
     6061 gcaggaagcg ctttgctgag caattggatc agcaaaaaaa tatttcatgc gccgaagctc
     6121 aaagccgcga attaagcgac catgtaattt tgtttgatga aagagcactc cgatatcaag
     6181 gtgcgtgaag caacaaagag tgacattgca gcaattcgct cgttggccaa tgacacctgg
     6241 ccggtgacct ataaagatat tttatccgac ggtcagttgc gatatatgat ggaactcatc
     6301 tacggtgaag aatctcttaa taaacagttt gatcttggtc accgtttcct gattgccgaa
     6361 gaaagccaaa accagcttgc ttttgcatcc tacaatatgt tgaagccggg cgtttacaaa
     6421 ctgcaaaaga tctatgtcct gccgtctgag caggggcgag gccttggaaa attgctcatc
     6481 aaccacatta tcgaaagcat aaaacaggaa ggcgcgactt cgctattatt aaatgtaaac
     6541 cgttacaaca ctgcaaagca cgtgtatgag catcttggtt ttacggtgat cggtgaggaa
     6601 gatattgata ttggcgaggg atattttatg aacgattatg ttatggagaa gaagctgtga
     6661 gttgtgagtt gatagatgac gatgagagtt tggcagatga cttggctggc cgcgagatgt
     6721 gttttgaaat tttcaatgtt caacgatcaa ttctcaattt tcgatttatg gaaacattga
     6781 acctgaaaca tcaaacctca aacctcaaac attctctgct tcatcgcctc gtataaaata
     6841 atgccggcgg ccaccgacac gttgaatgaa tcaaactggc ctttcatcgg tatggaaaaa
     6901 tgcgcatcgg cagctttcga caaatagcct tgtacacctt tttcctcatt gcccataatg
     6961 atgcagcacg gttcgcagag atctaattcg tgcaatcgtt gttttgcatg catttcgctt
     7021 gagaaaattt ttatgccgtt caaatgcaaa tcgtcaacag ctttcaacaa actgcttacg
     7081 cgacaaacct gcaattgttc gagtgcgccg gcgctgc
//
LOCUS       DASQJI010000880         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_457192,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000880 DASQJI010000000
VERSION     DASQJI010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457192"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2192
                     /locus_tag="VEV83_22835"
     CDS             <1..>2192
                     /locus_tag="VEV83_22835"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48040.1"
                     /translation="AQAVDPSLFNCMQWRMIGPHRAGRTVGACGVPQQPNTFYIGVNN
                     GGVWKTTDYGRTWLPIFDDQPTGSVGDVVVAPSNPDVIYVGSGEGLQRPDLSVGDGIY
                     RSGDGGKTWTNTGLHDAQQIGGLAIDPKNENRVFVAALGHPYGPNEERGVFRTLDGGK
                     TWERVLYKDENTGAVQVAIDPQDPNIIFADMWAGRQGPWENGAWNGPQSGLYKSTDGG
                     NTWKQITNGLPTTQQGLGRIGFCIAPNDHNRMYATVDAGQFGGIYRSDDSGESWTRIQ
                     TDERLWGRGSDFAELKVDPKNPDVVYSANVVTWKSVDGGKTWNAFRGAPGGDDYHRIW
                     INPGDPNIILIASDQGAIITVNGGETFSSWYNQPTAQFYHVSTDNDFPYNVYGGQQES
                     GSVGIVSRGNDGQITFHEWHPVGVEEYGYVAADPLDPNIIYGGKISKFDKRTGQIQNI
                     APEAVRSGKYRFLRTAPVLFSPIDPKTLYFAGNVLFKTTNGGHTWDVISPDLSRETWD
                     VPASVGIYTTDSLKTKMQRRGVIYTVAPSPKNINTIWCGTDDGLIQVTKDGGRSWKNV
                     TPKEITSWSKVSLIEASHFDVNTAYAAVNRIRCDDMRPHIYKTTDGGNSWAEIVSGLP
                     NDPINTIREDPQTKGLLFAGSERAVYVSFDDGANWQSLRLNMPATSIRDLVIKDDDIV
                     VGTHGRSFWVLDNITALRQLTSLVVHPGTILYKPQTAIRVRWNMWPDTP"
BASE COUNT          620 a          461 c          597 g          514 t
ORIGIN      
        1 gcacaggccg tcgatccatc tttgttcaac tgcatgcaat ggagaatgat cggtccgcat
       61 cgtgccggaa ggaccgttgg ggcttgtggt gtaccgcagc aaccaaacac attctacatc
      121 ggcgttaata atggtggggt atggaagacc actgattatg gcagaacatg gctgccgatc
      181 tttgatgatc aacccaccgg ttctgtcggt gatgttgtcg ttgcgccttc gaacccggat
      241 gtgatctatg ttggaagcgg tgaaggtctt caacggcctg acctttcagt gggtgatggc
      301 atttatagat caggcgacgg cggaaaaacg tggacgaaca caggcctgca tgatgcacaa
      361 caaatcggcg gtcttgcaat tgatccgaag aatgagaaca gagtttttgt agcagcgctc
      421 ggccatccat atgggccgaa tgaagaacgc ggcgtattca ggacacttga cggaggaaag
      481 acatgggaaa gggttttata taaagatgaa aacacgggtg cagtacaagt ggcgatcgat
      541 ccgcaggatc caaatatcat cttcgctgac atgtgggccg gaagacaagg gccgtgggaa
      601 aacggcgcat ggaatggacc gcaaagtggt ttgtacaaat cgaccgacgg aggcaacaca
      661 tggaagcaga tcacaaacgg tttgcccaca acgcagcaag gtttgggacg aattggtttt
      721 tgcattgcgc caaatgatca taaccgaatg tatgcgacgg tggacgccgg gcaattcggt
      781 ggaatatatc gcagtgatga ttcgggcgaa tcatggacga gaattcaaac cgatgaaaga
      841 ttatggggcc gcggttctga ttttgctgaa ttgaaagttg atccaaaaaa tccggatgtc
      901 gtttacagcg caaatgtcgt tacatggaaa tcggttgatg gaggtaaaac atggaatgcg
      961 tttcgtggtg cccccggcgg ggatgactac catcgcatct ggataaatcc tggcgatcca
     1021 aacatcattt tgattgcaag cgaccagggc gcgatcatta cggtcaacgg cggtgaaaca
     1081 ttttcatcgt ggtacaatca acctacggca cagttttatc atgtgagcac tgacaatgat
     1141 tttccatata atgtatatgg tggccaacag gaaagcggtt ccgttggtat tgtcagccgc
     1201 ggaaacgacg gacaaataac ttttcatgaa tggcacccgg ttggcgttga agagtatggt
     1261 tatgtagctg ctgatccgct cgatccaaat attatttacg gaggaaagat ttcgaagttc
     1321 gacaaacgta ccgggcaaat tcagaacatt gcacccgaag cagtgcgtag tggcaagtac
     1381 agatttttgc gaaccgcgcc agttttattt tcacccatcg atccgaagac attatacttc
     1441 gcaggaaatg ttttattcaa aacaacaaac ggcgggcata cgtgggatgt gatcagtccc
     1501 gatctttcaa gggaaacatg ggatgttcct gcaagcgtcg gcatctatac aacagattcg
     1561 ctaaaaacga aaatgcagcg gcgtggcgtg atatatacgg tggcgccatc gccgaaaaat
     1621 atcaatacga tctggtgcgg taccgacgat ggcctgatac aagtaacaaa agatggaggc
     1681 aggtcgtgga agaatgtgac gccaaaagaa atcacgtcat ggagtaaagt atcattgata
     1741 gaagcaagtc attttgatgt gaacacggca tacgcagcag tgaacaggat acgctgcgac
     1801 gacatgcgtc cgcatattta taaaacgact gacggaggta atagctgggc cgaaatcgta
     1861 agcggattgc caaacgatcc cattaatact attcgggaag acccgcaaac aaaaggatta
     1921 ctatttgccg gatcagaaag agcggtgtat gtttctttcg atgatggcgc taactggcaa
     1981 tcgctgcgct taaatatgcc cgcaacttcg atccgcgatc ttgtgataaa ggatgacgat
     2041 attgttgtgg gaacacatgg aaggagtttt tgggtcctcg ataatatcac agcgttgcgg
     2101 cagttaacga gtctcgtcgt tcatccgggt accattcttt ataagcctca aactgcaatt
     2161 cgtgtgcgat ggaatatgtg gccggatacg cc
//
LOCUS       DASQJI010000881         6059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_2455363,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000881 DASQJI010000000
VERSION     DASQJI010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6059
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2455363"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VEV83_22840"
     CDS             complement(<1..227)
                     /locus_tag="VEV83_22840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014222342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HYK48041.1"
                     /translation="MQTENFESLFHDKIDAEIKIEPKDWMPEAYRKTLVRQISQHAHS
                     EIVGMLPEGNWISRAPSLKRKAILIAKVQDEA"
     gene            354..956
                     /locus_tag="VEV83_22845"
     CDS             354..956
                     /locus_tag="VEV83_22845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HYK48042.1"
                     /translation="MENLDLRLIQERLSVSDESALIGLYQTCYKKLFHFAKAIVRTNE
                     LAEEAVEDVFINLWCRRNSVSGINDLNVYLYTSVKNASLNILSKKARELVAAPFDFLN
                     IELQDEFLSPDEMMITEEIMRKMQRAVEALPPRCKMIFKLIREDGLKYKDVADILNIS
                     VNTIDAQMAIAVKKLCLALNVEKPFRHSRNPAAQKNPEIF"
     gene            1011..2126
                     /locus_tag="VEV83_22850"
     CDS             1011..2126
                     /locus_tag="VEV83_22850"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HYK48043.1"
                     /translation="MPSENYIWKLFARCLNGEASAEESARLHELLRGDESLQQRYDIL
                     KQFWCSSPTNSFENIDEAKIQRIIRKAQEADGLSSRQQKERRKVRTRRKAQLFMGLAV
                     LITCTLIYISFEKRNNSNTSSVVQPEKQQQLVAQRGSRSKTILPDGSVVWLNAGSFLS
                     YAGKFTASNREVFLNGEAFFDVVKDATHPFIVHANGIDIRVLGTTFDVKSYSEERKVE
                     ATLIRGLIQITRPGKRDQKPLYLHPNEKLVIDLAPAESPANEPTQNTTPTLPAFTLVR
                     LDINLKTENRVETAWVYDRLQFRGENFEDLARKLERWYNVTIIFEDEDVKQLSFNGSF
                     ENETVEQAFAALKAAVPFDYSINEHEIFIRSAKKAVP"
     gene            2227..5571
                     /locus_tag="VEV83_22855"
     CDS             2227..5571
                     /locus_tag="VEV83_22855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYK48044.1"
                     /translation="MKFFGAAQKKTSITKLLHVMKLTIILLFFFVVNAAASGFGQQKI
                     TLNANAEIASILTQIEKQTNYRFLYNNALPELKKQVSLEVQNTELKDVLDQVFKGTGL
                     SYQFMENNLVVIKDAASPSNDVKAVVTGRVTGENGAALTGVSVQIKGTTKGTLTNVEG
                     QYSINTSESDVLVFSYVGYTTQEQPVNGRTEINVTMVTANAELTQVVVIGYGTQKKRD
                     LTGSIAVVSGDAVSKMPSTNPVASLQGKVAGLTIVNSGQAGSSPTVRIRGVNSTNNAD
                     PLYVVDGILQTNIDYLNQADIESMEVLKDPSSISIYGLQGGNGVIIITTKRAKKGQTT
                     INFQSNTGIQHITHKIDLVDATGFQKLYQQQRENVSGVPFDFSGYDSLGGNPNWQDEI
                     FRDALMTSNSISVSNSSEKSTTYFNIGYSNQEGVERFDQYQKYIGRLNQDVRLTNSIR
                     IGGEISGFYFKQDPPIGGIENEALWAAPIIPIKADPTYYYSTPSFQRAQVANPVAVID
                     GGNGHNLNSGYRFNGNIFAEIKFLKDFTWRSTFYADLGFNQSRGYSPLPFNYINVGEN
                     GNPTDTTFSNETHTHTSVYQSSATYKTYQQDHTLTFDKNFEGGHHVTALAGFSTLYHY
                     NEFINGYREDTALNIPDNSMFWYLNIAQERNPGNFAGGGGEDASMSFIGRVNYSFKNR
                     YLLNVTYRRDGTSKFSPSHQWGNFGSVGAGWVVSDEAFMENMRWINFLKLKASWGTVG
                     NGLNIGNYLSYPVLNNSNVAVFGNNVYAAVTPEYIPDPKLHWEVVEGKDAGIELRTLK
                     NRLSLDVDFYDRKTRDILTFITIPNVEKLYFTNLGTIDNKGIEITAGWRDNITRDITY
                     SINANFSSNKNEVVSIGNTFDFSIDNIVNNQVVNRTTSGYSIGYFYGYEQTGIYQDEN
                     EIAKGPHVSFQQQPKPGDISYRDIDGNDTINEKDRTYLGTPFPKYNFGISISFSYKNF
                     DLSIDGQGVSGNKIFLQRRTYTFADLNYETNRLDAWRKKGSGEIEPILDPGRSNNYKF
                     STYWLESGAYFRLRTVQIGYTFKPDQLKFVRTLRVYISGQNIKTFTNATGYSPEVPIS
                     NPTSAGADNGTYPVPAIYSFGINLTL"
     gene            5581..>6059
                     /locus_tag="VEV83_22860"
     CDS             5581..>6059
                     /locus_tag="VEV83_22860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018626877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48045.1"
                     /translation="MKKKFMNQQHTYKAFTYLALIALVTTFGLASCKKDFLDRQPLGR
                     YTSDNYPYPTGGGPYDQYVYAAYSALRDYYVTSYGFIGAVSIRSDDADKGSSLFDGST
                     YGLIAADNFPVFTDALFCNELWKGYYGSLIYKCNVVLREVAHDSSGTSDDVKSLATA"
BASE COUNT         1839 a         1311 c         1386 g         1523 t
ORIGIN      
        1 gcctcatcct gcacttttgc gatcaggatc gctttccgtt tcaaagaagg agcgcggctg
       61 atccagttcc cctccggcaa catgcccacg atctcactgt gcgcatgctg actgatctgc
      121 cgaaccagcg ttttgcgata agcctccggc atccagtcct tcggctcgat ctttatttcc
      181 gcgtcaattt tgtcgtgaaa gagcgactca aaattttcag tttgcatagc ctgacttcaa
      241 tcagcaaaaa tagagacttt tttttcgggc taacacgcgt taggttcatt ttctcatttt
      301 atttcgatac tttgctcatc tttttcacaa cctaagaaaa ggtttgctgc tgaatggaaa
      361 atttggacct tcggcttata caggaaaggc tatccgtaag cgatgaaagc gcattgatcg
      421 gactatatca aacgtgctac aaaaaattat ttcatttcgc aaaggcaata gtcagaacga
      481 atgaactcgc cgaagaagca gtagaagacg tttttataaa tttatggtgc aggaggaatt
      541 cggtctctgg catcaatgac ctgaatgttt atttgtatac ttcggttaaa aatgcgagcc
      601 tcaacatcct gtcgaaaaaa gcaagagaac ttgttgcagc acctttcgat ttcctgaaca
      661 tagaactgca ggatgaattt ttgtcgccgg atgagatgat gatcaccgaa gagatcatgc
      721 gaaaaatgca gcgggcggtg gaagcgttgc caccaaggtg caaaatgatc tttaaactga
      781 tccgtgaaga cggactgaag tacaaagacg tcgcagacat attgaacatt tccgtaaata
      841 cgatcgacgc tcaaatggcg atcgctgtaa aaaaattatg ccttgccctc aatgtagaga
      901 aacccttccg ccattcaaga aatcctgctg ctcaaaaaaa tccagaaatt ttttagcacc
      961 aattagtaga accgggaaaa aacgctgtct tatgttttgg cgctaactgc atgccatctg
     1021 aaaattacat atggaaattg tttgcccgct gtttgaacgg cgaggcttct gctgaggaat
     1081 cggcgcggct acatgaatta ttgagaggcg acgaatcact ccaacaacga tatgatatcc
     1141 taaaacagtt ttggtgttcg tctccaacca attctttcga aaacatcgac gaagccaaaa
     1201 tccagcgcat aatcagaaaa gcacaggagg ctgacggctt gtcgtcccgg caacaaaaag
     1261 agcgcaggaa agtacgcaca cgcagaaagg cgcagctttt tatggggctt gcagttttga
     1321 taacatgcac attaatttat atttcgtttg aaaagcgaaa caatagcaat acctcgtccg
     1381 tagtacagcc ggaaaaacaa cagcaactgg tagcgcaaag aggaagccgc agcaaaacga
     1441 tcctacccga cggctccgta gtttggctga atgctggatc atttctgtct tacgcgggaa
     1501 aattcaccgc ttcaaaccgg gaagtatttt taaatggcga agcatttttt gacgtcgtaa
     1561 aagatgcgac acaccctttc attgtacatg cgaacgggat cgatatccgt gtacttggga
     1621 cgacgttcga cgtgaaatct tattcagagg aaagaaaagt tgaggcaaca cttataagag
     1681 gattgataca gatcacgcgg ccgggcaaac gcgatcagaa gccgctatac cttcatccaa
     1741 acgagaaact ggtgatcgac ctggcgcctg ctgaatcgcc tgcaaatgaa ccaacgcaga
     1801 ataccacccc gacgcttcct gcattcacat tggttcgcct cgacatcaat ctgaaaacgg
     1861 agaaccgtgt ggaaactgcc tgggtgtatg accggttaca attcagagga gaaaattttg
     1921 aagaccttgc gcggaaactt gagcgctggt ataatgtgac gatcatcttt gaggacgaag
     1981 acgtgaaaca actaagcttt aatggatctt ttgaaaacga aaccgtagag caggcatttg
     2041 ctgcattgaa ggctgctgta ccatttgact attcaatcaa cgaacatgaa atatttatca
     2101 gatcggcaaa gaaagcggtg ccctgattag gagacaacgc aggggatgct gaaatcatcc
     2161 cccgctatac agattaatca catgcatcac cttaatgatt gtttcttaac ctataatatc
     2221 taaagtatga aattttttgg agctgcgcaa aaaaaaacaa gtattaccaa gttattgcat
     2281 gttatgaaac tcacgatcat cctgcttttc ttttttgtgg ttaacgctgc tgcgtcgggc
     2341 ttcggccagc aaaaaattac gctgaacgca aatgcggaga tagcaagtat tttaacgcag
     2401 atagaaaagc aaaccaatta caggtttctt tacaacaacg ccttgcctga actaaaaaaa
     2461 caagtttctc tggaggttca gaatacagag ctgaaagatg tgcttgacca ggtgtttaag
     2521 ggaaccggcc tttcttacca gttcatggaa aataatctcg tggtcataaa agatgcggcc
     2581 tcgccgtcaa acgatgtaaa ggcggttgtt acgggccggg tgaccggtga gaatggagct
     2641 gcgctgacgg gagtttccgt acaaataaaa gggaccacca aaggaacact cacaaacgtt
     2701 gaagggcaat attcgatcaa tacatcggaa agcgatgtgc tggtgttttc gtacgttggt
     2761 tatacaacgc aggagcagcc ggtgaacgga agaactgaga tcaatgttac gatggtcacc
     2821 gccaatgcgg aattgacaca ggtggttgtg ataggttatg gcacgcagaa aaaaagagac
     2881 cttaccggtt cgatcgcggt ggtgagtggt gatgcggttt cgaagatgcc gtcaacaaat
     2941 cccgtggctt ctttacaggg aaaggttgca ggtttaacga tcgtgaattc aggccaggcc
     3001 ggttcttcac caaccgtgag gattcgcgga gtgaattcga cgaacaatgc tgatccgttg
     3061 tatgtagtgg atggaatact gcaaacgaat atcgattacc tgaatcaggc agacatcgaa
     3121 tcaatggaag ttttgaagga tccttcttca atttccattt acggattgca gggtggtaac
     3181 ggcgtgatca tcattaccac aaaacgggca aagaaaggac aaacgacaat taactttcaa
     3241 tccaacaccg gcatacagca tatcacgcac aagattgacc tggtggatgc gactggtttt
     3301 caaaagttat atcagcagca gcgagaaaat gtgtctggtg tgccgtttga tttttcggga
     3361 tacgattcgc ttggaggaaa tcctaactgg caggacgaaa ttttccgcga tgcacttatg
     3421 acgagtaaca gtatcagcgt gtcaaacagc agtgaaaaaa gcactacata tttcaacatc
     3481 ggttattcaa accaggaagg cgttgaacga ttcgatcagt atcaaaaata cattggaagg
     3541 ctgaatcaag atgtaaggct aacaaatagc attcgcattg gcggcgagat aagcggattc
     3601 tatttcaagc aagatcctcc tataggagga atagagaatg aggctctttg ggctgcgccg
     3661 ataataccaa taaaggcgga tccgacctat tattattcaa cgccttcatt tcaacgggcg
     3721 caggttgcaa acccggtcgc cgttattgat ggcggcaacg gacataacct gaacagcggc
     3781 taccggttca atggtaatat ttttgccgag atcaaattcc taaaggattt tacctggaga
     3841 tctactttct atgccgatct tggattcaac cagtcgagag gctattcgcc gctacctttc
     3901 aactacatca atgtaggcga aaacggaaat ccgaccgata ctactttctc taacgaaacg
     3961 catacccaca catccgtgta ccagtcgtcg gctacttata aaacttatca gcaagatcat
     4021 acgcttacat tcgacaaaaa ttttgaaggc ggtcatcatg ttaccgcatt ggcaggattt
     4081 agcaccctct accactacaa tgaatttatc aatgggtacc gggaagatac cgccttaaac
     4141 attccggaca actccatgtt ttggtattta aatattgcgc aggaacgaaa tccgggaaat
     4201 ttcgcaggtg gcggaggaga agatgcttcg atgtcattca tcggcagagt aaattattcg
     4261 tttaaaaacc gttatttatt gaatgttaca tatcgccggg acggaacttc taaattttcg
     4321 ccttcacatc aatggggcaa tttcggaagt gtgggtgccg gatgggtggt cagcgacgaa
     4381 gcctttatgg aaaatatgag gtggatcaac tttctaaaat taaaagcttc ctggggaacc
     4441 gtaggaaacg gattgaatat tggaaattat ctttcgtacc cggtgctgaa taattcaaat
     4501 gtcgccgtgt ttggaaataa tgtgtacgca gccgtaaccc ccgagtacat cccggatccg
     4561 aagttgcact gggaggttgt tgaaggcaag gatgcaggca ttgaactgcg tacactcaag
     4621 aacaggctaa gcctggacgt agatttttac gacaggaaga ctagggatat ccttacattt
     4681 ataacgatac cgaacgttga aaaactatac ttcacaaacc tgggcaccat cgataataaa
     4741 ggcatagaaa taaccgccgg atggcgtgat aacatcacaa gggatataac ctactcaata
     4801 aacgcaaatt ttagcagcaa caaaaatgaa gtggtatcga tcggtaatac ttttgatttc
     4861 tctatcgaca acatcgtgaa caaccaggtt gtaaacagga caacttcggg atattcaatt
     4921 ggctattttt acggatacga gcaaacgggt atttaccagg atgaaaatga aattgccaaa
     4981 gggccccatg tatcttttca acaacagcca aagcccggag acatctctta ccgcgatatt
     5041 gatggtaatg acacaataaa tgaaaaagac cgcacctacc tgggaacacc atttccaaaa
     5101 tacaattttg ggatctctat ttcgtttagc tacaaaaatt ttgatttgtc aatcgacggg
     5161 cagggcgtga gcggtaacaa aattttcctc caacgacgaa cttacacgtt tgcagacctg
     5221 aactatgaaa ccaaccggct tgatgcctgg cgtaaaaaag gatcaggcga aattgaaccc
     5281 atcctcgatc cgggtcgctc aaataactac aagttttcta cttattggct tgaatcggga
     5341 gcatatttca ggctacgcac cgtgcaaatt ggctacacat tcaaacctga ccagttgaaa
     5401 ttcgtgcgaa cacttagagt ctacataagc ggacaaaata tcaaaacatt tacaaacgca
     5461 accggttaca gcccggaggt gccgatcagc aatcccacga gtgcgggagc agataatgga
     5521 acgtatcctg tcccggcgat ctattcattt ggaatcaatc taaccttgta atcgcgtgat
     5581 atgaaaaaaa aatttatgaa ccagcagcat acatacaaag ctttcacata cctcgccctg
     5641 atcgcgttgg taacaacatt tggcctcgca agctgcaaaa aagattttct tgatcgccaa
     5701 cctttgggcc ggtacacatc agacaattat ccatatccta ccgggggcgg cccgtatgat
     5761 cagtatgtct acgcagcgta ttcggccttg cgggattact atgtaactag ttatggattt
     5821 atcggtgccg taagtataag aagcgacgat gctgataagg gcagcagcct atttgatggt
     5881 tccacctatg ggctaatagc ggcagacaac tttcctgtat ttaccgatgc gctcttttgt
     5941 aacgaattgt ggaaaggcta ttatggaagt ttaatttaca aatgcaatgt ggtgttgcgc
     6001 gaagtggctc acgattcgag cgggacctcc gacgatgtaa aaagtttggc caccgctga
//
LOCUS       DASQJI010000882         4194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1224982,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000882 DASQJI010000000
VERSION     DASQJI010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4194
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224982"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VEV83_22865"
     CDS             complement(<1..265)
                     /locus_tag="VEV83_22865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48046.1"
                     /translation="MKIKTMIILCTLAAIIFSKQASAQNQFPHVSIFAHALYANALDK
                     SSQKLYNNGFGGVAGVSYGKNNTYFVGSVGYTSFPSAFGPGSLE"
     gene            398..1159
                     /locus_tag="VEV83_22870"
     CDS             398..1159
                     /locus_tag="VEV83_22870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014217796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2520 domain-containing protein"
                     /protein_id="HYK48047.1"
                     /translation="MKITIVGAGNVGTVLGRVLKEKGHSINEVFSRKHFHAITLADEL
                     QARVCHDLKQINTESDLYIVAISDDAVGTISASLQLEKQIILHTSGSIPIQYLKNVSE
                     NYGVLYPLQSLRKETHDIPSMPFLVDGNNKDTLQQITNLAISISPQVIVANDETRFHY
                     HLTAVIVSNFTNHLYALGKQYADQNEIDFKLLMPLIEEIVRRLYHYEPAKMQTGPAVR
                     GDKNTIDKHLALLEQFPQLRDVYAVMSESISGFRN"
     gene            complement(1266..1763)
                     /locus_tag="VEV83_22875"
     CDS             complement(1266..1763)
                     /locus_tag="VEV83_22875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018627012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYK48048.1"
                     /translation="MTFIEFFKNQFIAEGETTRKMLSRVPDDKFDYKPHAKSMDMKRL
                     VTHIADLPGWIHMTLTTDGIDFAQPYEQPQVTNNAELMAYFEKRYNDGLSTLIPEYEA
                     TLDQPWTLRNGDKIYSSDPKIDILRMSFSQQIHHRAQLGVYLRLLDVPIPGSYGPSAD
                     ENNFG"
     gene            complement(1812..2780)
                     /locus_tag="VEV83_22880"
     CDS             complement(1812..2780)
                     /locus_tag="VEV83_22880"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HYK48049.1"
                     /translation="MNRIDRLAAIVLQLQSRRLVRAQDIADKFSISLRTVYRDIRGLQ
                     EGGIPIIGEAGLGYSLMEGYKLPPVMFNQDEASALLTAAKLVQSKTDQHTATHYNSAL
                     DKIKAVLRFAEKEHIEEIDEHIAVMSHPAIVQQPRAELHLQPLLKSIAEKKVLEINYT
                     SIEKNETLRRKIEPVGIYNLGSHWYLVAFCRLRNDYRNFRTDKIGQLKFTDELVPQIH
                     PPLQSFINQMSAERQVQKVVIEIERDIEKYFGEQKYYNGFVKQEEVADHIRMTFLSGS
                     LTGFARWFIMFGDKATIIEPAELNELVATIAENILKKIEEQQMLLT"
     gene            3064..3867
                     /gene="speB"
                     /locus_tag="VEV83_22885"
     CDS             3064..3867
                     /gene="speB"
                     /locus_tag="VEV83_22885"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HYK48050.1"
                     /translation="MIKLIGIPYDANSSFLRGPALAPARIRLMEQEGSANCFSETGVE
                     IIDGTTYDDTGDISFGDISAASAFQLIKEPILKTISGGQKTLCLGGDHSVSFPIIDAF
                     TEKFNDLNVLHLDAHCDLYQSFDNNPFSHASPFARIMEKGRVRSLTQVGIRTLNTHQR
                     EQAKRFNVSIVEMKSFSFNFIKALRSPLYISLDMDVLDPAFAPGVSHHEPGGLSVRDL
                     ISIIQNINAEVVGADIVEYNPNRDVNNVTAMAAYKLFKEMIALMTDQLK"
BASE COUNT         1163 a          882 c          904 g         1245 t
ORIGIN      
        1 tttccaaaga acccggtcca aatgccgatg gaaatgaagt ataaccaacc gaaccgacaa
       61 agtacgtatt gttctttcca taggaaacgc cggccacccc gccaaaaccg ttgttataca
      121 acttttgact gcttttatcc agcgcgtttg catagagcgc gtgtgcgaaa atagaaacgt
      181 gtggaaactg gttctgtgcc gatgcttgtt tcgaaaatat gattgcagcc agtgtacaaa
      241 gaatgatcat cgtctttatc ttcatatatg gttttattta aaaacgtaaa ttaaagacga
      301 attcttttac acaacgaaat aattattcag atttagtaga caaatcacgg agaaatttga
      361 gtgtccgtta tgtggttaaa ccagtttaca tttaaaaatg aagatcacaa ttgttggcgc
      421 gggaaacgtc ggcaccgtat tgggaagggt gttgaaagaa aaaggtcatt ccattaacga
      481 ggtattcagc agaaagcatt ttcatgctat tacccttgct gatgaactgc aagcgcgggt
      541 ttgccatgat ctgaaacaga tcaatacaga aagcgatcta tatatcgttg caatcagcga
      601 tgacgcagtt ggtacaataa gtgcttccct gcagttggag aagcaaatta ttttacacac
      661 gtcgggaagt attccgatcc agtatttgaa aaatgtttcc gaaaattacg gagtgctgta
      721 tccgctccag tcgttaagaa aggaaacgca cgatattcct tcgatgccat ttttggtcga
      781 tggtaacaac aaagatactt tgcaacaaat cactaacctc gccatatcga tttcaccgca
      841 ggtaattgtc gcgaatgatg aaacacgttt ccattatcat ttgacagcag taatagtttc
      901 aaattttacc aaccatcttt atgcactcgg aaagcaatat gctgatcaga atgaaatcga
      961 tttcaaatta ctgatgccat taattgaaga aattgttcgc aggctttatc attatgaacc
     1021 tgcaaaaatg caaacgggtc cagccgtaag aggtgataaa aataccattg acaagcatct
     1081 tgcgttgctt gagcaatttc cgcagctgag agacgtgtac gcagtgatga gtgaaagcat
     1141 tagtggattt cgcaactaat atctgctctc ggttttccta atttatagac gattgattgt
     1201 tgagtcgtga taaacaatca acactcaata atcaataatc ataatcaatt ctcaataacc
     1261 tgctcctatc caaaattatt ttcatctgcg ctggggccgt aactgccagg aatcggcaca
     1321 tcaagcaaac gcaaataaac acccagttga gcacgatgat gtatctgctg gctgaacgac
     1381 attcttaata tatcgatctt cgggtcgctg ctgtatattt tgtcgccatt tcgtaatgtc
     1441 cacggctggt ccaatgtggc ttcatattcg ggaatgagcg tggacagccc gtcgttgtat
     1501 cttttttcaa aataggccat gagttccgca ttgttggtca cctgcggctg ctcatacggt
     1561 tgagcaaaat caattccgtc agtggtgagc gtcatgtgta tccaaccggg caggtctgca
     1621 atatgcgtaa ccagccgttt catatccata ctttttgcat gcggcttata atcaaatttg
     1681 tcgtccggaa cgcgggaaag cattttccgg gtggtttcac cttcagcgat aaactggttc
     1741 ttaaaaaatt caatgaatgt catgatcttt tttatttagt tatacaaaga aacaaacgcc
     1801 tattgacaac cctatgtcag cagcatctgt tgttcttcaa tttttttcaa aatattttct
     1861 gctattgttg cgacgagctc gttcagttct gccggctcga ttatggtcgc tttgtcgcca
     1921 aacataatga accaccgggc aaagccggtt aatgacccgc tcagaaatgt catgcggata
     1981 tgatcggcga cttcttcctg cttcacgaag ccgttataat atttctgttc accgaaatat
     2041 ttttcgatat ctctttcgat ctcgatcacc actttctgta cttgtcgttc tgctgacatc
     2101 tggttgatga aactttgcag cggcgggtgt atctgaggta caagttcatc tgtaaatttc
     2161 agttgcccga ttttatcggt ccggaaatta cgatagtcat ttctcaagcg gcaaaacgcc
     2221 acgagatacc aatggctgcc aaggttgtaa atgccaaccg gttcaatttt gcgccgcagt
     2281 gtttcatttt tttcaatgga ggtgtagttg atctctaaga ctttcttttc ggcaatgctt
     2341 ttcaacaatg gctgcaagtg caattcagct ctcggctgtt gcacgattgc gggatgcgac
     2401 attacagcga tatgttcgtc aatttcttcg atgtgttctt tttctgcaaa tctcaatacg
     2461 gcttttattt tgtcgagtgc tgaattgtaa tgcgtagctg tgtgctggtc ggttttcgat
     2521 tgaacgagtt ttgcggccgt cagcaacgca gatgcctcgt cctggttgaa catcactggc
     2581 ggcagtttat aaccttccat gaggctgtag ccaaggcccg cctcccctat tatcggtatt
     2641 ccgccttcct gcaggccacg aatatcccgg taaacggtgc gcaagcttat cgagaattta
     2701 tccgcaatat cctgcgccct tacaagacgc cttgactgaa gttgtaaaac gatggccgct
     2761 aaacggtcta tgcgattcat agattcaggt tcgctgtaaa gatatgatgt acggctcaac
     2821 agggttgatg agtttgatca tcatggtttt gatgtttgag ttttttgttt cgatagaact
     2881 acagttcagg caagaccacg cgtaaatttg ttctttcccg gaccggcagg attgattcat
     2941 gggcagaaca tcaaaaacaa aaacaagggg aaaattgggg aattgaaact aacagtgcga
     3001 ctttgttaac cagttgcgga ttcgaataac cctgataaac cgatgaacta ataaactaaa
     3061 ttgatgataa aacttatcgg cattccttac gatgcaaatt catcttttct gcgagggccc
     3121 gcgcttgctc cggcgaggat acgtttgatg gagcaggaag gatcagcaaa ttgcttctcg
     3181 gagaccggcg tcgaaattat tgacggaacg acgtacgacg ataccggcga catttcgttt
     3241 ggtgatatca gcgccgcatc cgcatttcag ttaataaagg aacctattct aaagacaatc
     3301 tcgggcggtc aaaaaacact ttgtctcggt ggggatcatt cggtaagttt tccaatcatt
     3361 gatgcattta ccgaaaaatt caatgatctg aatgttttgc atcttgatgc gcactgcgat
     3421 ctgtatcaga gtttcgacaa caatcccttt tcacacgctt ctcctttcgc caggatcatg
     3481 gaaaaaggaa gagtcagatc attgacacaa gttggaatca gaacattgaa tactcatcag
     3541 agagagcagg cgaaaagatt taatgtttcg atcgttgaaa tgaaaagttt cagttttaat
     3601 ttcatcaaag cgctgagatc acctttgtat atttctttag atatggatgt tcttgatcca
     3661 gcctttgctc ccggagtttc tcatcatgag ccgggcggac tatctgtgag agatctgatc
     3721 agcatcattc aaaatatcaa tgcagaagtt gtgggcgcgg acattgttga atataatcca
     3781 aaccgcgatg tgaataatgt aactgcgatg gccgcttaca aactattcaa ggagatgata
     3841 gcgttgatga cagatcaact aaaatagata acctggcatg cttaatgagt tttatcagcc
     3901 agcatgtgat tttctgccaa agcgcaaata accgcctcaa tgttatcgtt gtgttctttg
     3961 tgtccccctt agtgttcgtt gtgcttcaac cgaacttgat gtgcatgtaa atgaccatgt
     4021 aaaaaaaatc ccgaaggttt tacgaaatac gcagatggca gtttcgttaa ccccgggatt
     4081 ttctcatagc gaacggacat acttagtttg cttctttcgt cgctttgttt ccaaacatgt
     4141 agccgagcct tatcccgaga taagcattgt tgaattgtgt tcccggttcg ttgg
//
LOCUS       DASQJI010000883         3967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_149287,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000883 DASQJI010000000
VERSION     DASQJI010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149287"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VEV83_22890"
     CDS             <1..292
                     /locus_tag="VEV83_22890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYK48051.1"
                     /translation="DSLSFRSFIVPGLDNEPQFIGAAFNKQIQGKVSSPIAGMKGVFV
                     LKGEGISGVANMGQTAEMMRTQMEQALKQQMAQEVTALRKAADVKDYRSKFY"
     gene            385..900
                     /locus_tag="VEV83_22895"
     CDS             385..900
                     /locus_tag="VEV83_22895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2480 family protein"
                     /protein_id="HYK48052.1"
                     /translation="MQIGDEIVNRVAESGLVTIDLEDFYPKEELKIFDLKEYLFRGLI
                     IKEKDFREALKNVDWNRYANANVALTCTADAIIPVWAYMLATSYLQPFAKNIVLGDEK
                     KVVETLLLKNMSQLDPKEFADKRVVIKGCGEIQIPESAYVQITATLLSNAKTIMYGEP
                     CSTVPIYKRKN"
     gene            1346..2665
                     /locus_tag="VEV83_22900"
     CDS             1346..2665
                     /locus_tag="VEV83_22900"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYK48053.1"
                     /translation="MSKKPPGLFLFCIFLTSIIAAQQSDSVLTNADLQQCVQYALEHQ
                     PTVKQSLIDEEIVETYIKTRLADWYPQLNLDYSIQHYFEVQKSVFNGSTVNLSAKNYS
                     SANFSLNQTIFNPDVLLARNTRSDVRSQVKQFTANNKIYTVLNVSKAFYDVLLTQQQA
                     VLTDEDILRLDRSVKDAYNQYKAGIVDKTDYKRAQISLNNARAQKKQYEELLTAKYSV
                     LKLLMGYPQQAPLDLVYDSVQLHNEIYVDTLQQVNYAARVEFRILQTQRSLLEANVKY
                     YKWNYLPSVSAFVNYNINFFDNSFSKLFRQGFPFSYAGLALNFSIFEGGKRSQQIKGA
                     NLQLERLTYNYTSLRDSIQTEYTEALSAYKSNLNEYYVQRENVELAEDVYNTIQLQYR
                     AGIKTYLDVIIAESDLRSTQVNYLNALYQVLSSKLDVQKALGEISYQ"
     gene            2677..3816
                     /locus_tag="VEV83_22905"
     CDS             2677..3816
                     /locus_tag="VEV83_22905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018613567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYK48054.1"
                     /translation="MNRINKTGNHSFTLLLLSLITLASCGSKTSQQQMQGPPPAVPVT
                     VQKVTTGNAVYYDEYPATINALNEIELRPQVSGYITGIYFKDGDRVKKGQKLYSIDQQ
                     QYQANYQQAVANLGVTQTNLLKAQKDADRYHELEKQDAIAKQQVDYADAALAAAEKQV
                     EAAQANVRSVQTSVRYTSIFAPWAGTIGISQVKIGAPVTAGQTVLNTVSSDDPVAVDF
                     AVDQSQIYRFTQLQQQGAKANDSTFRLAFANDLYPYPGKIYLMDRAVNRQTGTIIIRL
                     VFPNSNSMLKAGMSGTVRVQNNSGHASILIPYKAITEQLGEFFVYVVGDSNKVSQRRV
                     VLGPQIGTNVIVRDSLREGETVVVQGVQNLREGAVIKIDSSAEKK"
BASE COUNT         1184 a          835 c          948 g         1000 t
ORIGIN      
        1 tgacagtctc agcttcaggt cttttatcgt tccgggattg gacaatgagc cgcagttcat
       61 tggagcagcg ttcaacaaac aaatacaggg aaaggtaagc agcccgatcg ccggtatgaa
      121 gggtgtcttt gttttgaaag gggaaggaat atcgggcgtg gccaacatgg ggcaaacggc
      181 agaaatgatg agaacgcaaa tggaacaagc actcaaacaa caaatggcac aggaagttac
      241 tgcattacga aaggctgccg atgtaaaaga ttatcgttcg aaattctatt agaaaaatta
      301 agggcacaga gaaaaggttg tcggttggca accttttttt gtttgacttg ctacagcgta
      361 aatttgctgt aaataattta gcacatgcaa atcggcgatg aaatcgtgaa cagggttgca
      421 gaaagcggtc ttgttacaat agatcttgag gatttttacc ctaaagaaga attgaaaatt
      481 ttcgatctca aagaatattt gtttcgcgga ttgatcataa aagaaaaaga tttcagagaa
      541 gcgcttaaaa acgttgactg gaatcgttat gcaaacgcaa acgttgcgct cacatgcaca
      601 gcggacgcca ttattccggt gtgggcatac atgctggcga cctcttatct tcagccgttt
      661 gcgaagaaca tcgttttggg cgatgaaaag aaagtcgtcg aaacgttgct actgaaaaat
      721 atgtcgcaac tagatccgaa ggaattcgct gacaaacggg tggtcatcaa gggttgcggc
      781 gagatccaga tcccggaaag cgcatatgtg caaataaccg ctacactgct ttcaaatgca
      841 aaaaccatta tgtatggtga gccctgcagc acggtcccca tatacaaaag gaaaaattaa
      901 tttctcattt agttgtatat tctgtttgaa gcaaccgcgc caaatgttcc gcctggtgtt
      961 tcgacggccg gcaaagttgt tgtgctgttt gcggctcgat gtaatgctca cgcgaattct
     1021 ctacgcaaaa gctggctgtc accacgagaa caagataaag aagtaataca aataatgagc
     1081 gaatttttgg cgcggtgaat acggatgatg aatttccatg tctgttgctc ttatctcttc
     1141 ctggaccggg cggctcagct cgacgagagc tgctgacgga tggcaggaca tcaatcgttc
     1201 tcaaaagcgt ttgtcggcag cacgtgtgaa cgagtaaggg tcgaaggtta aaagatgtcc
     1261 gctcgatttt cattcttatt tttgccgcgc cgtttggatt cgtggcacac gttatgtttt
     1321 gaagggatgg cgtagaacct atggtatgag caagaaaccc cctggtcttt ttttgttttg
     1381 tatcttcctc acgagcatta ttgcggcgca gcagtctgac tcggtgctta ccaacgcgga
     1441 cctgcagcag tgcgtacaat atgcgctcga acaccaacct acagttaagc aatctctcat
     1501 tgatgaggag attgtcgaga catatattaa gacaaggctg gcagattggt atccgcaatt
     1561 gaatcttgat tattcgattc aacattactt cgaggtgcag aaatctgtct tcaacggatc
     1621 gacggtaaat ttgagtgcaa aaaattattc gtctgcaaac ttctcactca atcaaacgat
     1681 ttttaacccg gatgttttat tggcccgcaa tacacggtcc gatgtgcgat cacaggtgaa
     1741 acaattcaca gcaaataata agatttacac agtgctaaac gtaagcaaag cattttacga
     1801 tgtacttcta acgcaacagc aagctgtgct aaccgatgaa gatatcttac gtttagacag
     1861 aagcgtaaag gatgcatata atcaatacaa ggccggcatc gtggacaaaa ccgattacaa
     1921 gagagcgcag atctctctga acaatgcccg tgcacaaaag aagcagtacg aggaattgct
     1981 caccgcgaaa tattcggttt tgaaattgct gatgggttat ccgcagcagg caccgctgga
     2041 cctcgtttat gacagtgtgc agcttcataa cgagatatat gtcgacacgc tccaacaggt
     2101 aaactatgcc gcaagagtgg agttccgcat cctgcaaaca cagagaagtt tgcttgaagc
     2161 gaatgtgaaa tattataaat ggaattattt gccgtcggta tcggcgtttg taaattataa
     2221 catcaatttt tttgacaaca gcttttcaaa gctttttcgg caagggtttc ctttttctta
     2281 tgcggggctc gcattgaatt tttcaatttt tgaaggtggc aagcggtcgc aacaaataaa
     2341 gggtgcaaac ttgcagttgg agcggctcac gtacaactat acatcattgc gggactcaat
     2401 tcaaacagag tatacggagg cactgagcgc ttacaagtcg aatctaaacg agtattatgt
     2461 gcagcgcgaa aatgtggagc tggctgaaga cgtctataac acgattcagc ttcaatacag
     2521 agccggtata aagacctatt tggatgtgat catcgctgag agtgatctgc gcagcacgca
     2581 agtaaattat ctgaacgcat tataccaggt tctcagcagc aagctcgatg tacaaaaagc
     2641 tttgggagag atcagctatc aataaaaatg ccctgtatga atcggatcaa caaaaccggc
     2701 aatcattcat tcaccctttt actgctctca ctgattacgc tcgcttcatg tgggagcaag
     2761 acatcgcaac agcaaatgca gggtccaccc cctgcggttc ccgttaccgt ccagaaggta
     2821 acaacgggaa acgctgttta ttatgatgag tatcccgcta caataaatgc cctgaacgaa
     2881 attgagctac gtccgcaggt aagtggatac attaccggta tttattttaa agatggagac
     2941 cgggttaaga agggacaaaa attatattca atcgaccaac aacaatacca ggcaaattat
     3001 cagcaggcgg ttgcgaacct tggtgtgacg caaacaaatt tattaaaggc ccaaaaagat
     3061 gctgaccgtt atcacgagct ggagaagcaa gatgccattg caaaacagca agtagattat
     3121 gcggatgccg cacttgctgc tgccgaaaag caagttgagg ctgcgcaggc taatgtgcgc
     3181 tctgttcaaa cgagcgttcg gtacaccagt atattcgcgc cctgggccgg caccatcggg
     3241 atatcccagg taaagattgg cgccccggtt acggccggcc aaacggtgtt gaataccgtg
     3301 tcttcggatg acccggtggc agtggatttc gctgttgacc aatcgcagat ctatcgcttc
     3361 acacaattac aacagcaggg cgcaaaagca aatgattcaa cttttcgcct tgcatttgca
     3421 aatgacctgt atccatatcc cggaaaaatt tatctgatgg accgcgcagt taaccgtcaa
     3481 actgggacca tcattatacg cctcgttttt ccaaacagta acagcatgct caaagcaggt
     3541 atgagcggca ctgtccgtgt acaaaacaat tcaggacacg cgtccatctt aataccgtac
     3601 aaagcgataa ctgagcagct tggtgagttc tttgtgtacg tggtgggcga cagcaacaaa
     3661 gtgtcgcaac gaagagttgt tcttggtccg caaataggca caaatgttat tgtccgcgac
     3721 agcttaagag aaggagaaac cgttgtggtc cagggagtgc aaaatttaag agagggtgct
     3781 gtgataaaaa ttgattcgag cgccgagaaa aaatgaactc actaacagat agactcagag
     3841 agggtagatt aagaacattt gtaaagagat gtcgatatga tcgcagatac ttttattaaa
     3901 cgtcctgtta cagcaatggt ggtatccatt gtgatcgtac ttgtcggact aatcgcgatg
     3961 acaacgt
//
LOCUS       DASQJI010000884         8400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1994550,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000884 DASQJI010000000
VERSION     DASQJI010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 8400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8400
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994550"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..281)
                     /locus_tag="VEV83_22910"
     tRNA            complement(198..281)
                     /locus_tag="VEV83_22910"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(245..247),aa:Ser,seq:tga)
     gene            complement(1120..1845)
                     /locus_tag="VEV83_22915"
     CDS             complement(1120..1845)
                     /locus_tag="VEV83_22915"
                     /inference="COORDINATES: protein motif:HMM:NF023178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HYK48055.1"
                     /translation="MLVLLFQWFAAHFFADFLLQSKKLVQNKKVYKQGSWFLYVHALI
                     HAALIYLLSPDKSIWLIPVIVFVSHYCLDLWKLYRKDTIAAFILDQAMHIITLIILWL
                     VFYQAPGWAATHFQQLMNDYNFWLIATGYLVTIFPLAFIVGYATQRWRKDIEGSFDRT
                     GTSLSEAGKWIGMFERILVFTFVINNHFEGIGFLIAAKSILRFNDIKGSEARKEAEYV
                     LIGTLMSFAASIITGIVTLNLMK"
     gene            complement(1858..2487)
                     /locus_tag="VEV83_22920"
     CDS             complement(1858..2487)
                     /locus_tag="VEV83_22920"
                     /inference="COORDINATES: protein motif:HMM:NF027589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SatD family protein"
                     /protein_id="HYK48056.1"
                     /translation="MAKTAKAIVITGDIIASSKLSPLKRKKLQDRLNVFIKKTNKAYP
                     DFKAQQFRGDSLQALLTKNKVAALRLALSTYCFLAIEGFKIRQSIGIGDVSFTSDNVI
                     TSDGTAFRLSGQHIDEIKRRNELMSITAEDTSFNEEWEVHSASLNFLLERLSSAQADA
                     LYFQLQNTRQEDIAKALHISQPSVHQRLQAAGWSVINPMLQRFESIIAL"
     gene            complement(2620..3510)
                     /locus_tag="VEV83_22925"
     CDS             complement(2620..3510)
                     /locus_tag="VEV83_22925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HYK48057.1"
                     /translation="MRATLIRLHVAVFLWGFTGVLGRAITLNEAWLVWWRMLITIITL
                     WLLFYFSKRIQEISLKDFFKIAAIGTMLSIHWLFFYGSIKYADVSIALTCLSTTGLLS
                     AVIEPLSFRRRINPYEIALGLLALVGIAVIYMTNLAYSVGICIGLLSALFLVIVSIMN
                     KKLVTSHDAERIALYQFTGGFLGLTVLMPLYDFLFPPTHMMPYQWDWLWLFVLSWCCT
                     ILTFMLYIRALKHISAFTLNLTLTLEPVYGILLAFLLYHENKTLSKSFFIGLGLILLA
                     VFLQMFRLVKEHRKLPVNTL"
     gene            3753..4943
                     /locus_tag="VEV83_22930"
     CDS             3753..4943
                     /locus_tag="VEV83_22930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PorV/PorQ family protein"
                     /protein_id="HYK48058.1"
                     /translation="MKTCGRLILVMILTTGTLCGNSQFRKYSNEFLNIGAGARGLAMG
                     GAQVASAEDGNAGYWNPAGLVNVVAYPSISLMHAEYFAGIGKYDYISSAIPIGNGYRT
                     LGFSLLRFGVDDIPNTLFLVEPDGSLNYNNIQSFSSADYAFLISYAQVIRDDDKAQFS
                     WGANTKIIYRDVGSFATAWGFGFDAGLLYRTATWRFGIAARDVTTTFNAWSFSFTDEE
                     KQILYLTNNDIPVRSTEITSPRLVPAVGYNFRFADKLHLLTEADFDVTFDGKRNTLIS
                     SNPISIDPKFGMEANISNVVFVRAGVSNFQRALADGDTLNQKKVWIFQPSIGAGFKAG
                     NVAIDYAFTNLANQSNPLYTNVFSLRIDLAPKSKEKKTRGSIPEVQRPAKSKKKEKGS
                     YPVQ"
     gene            4940..>8400
                     /locus_tag="VEV83_22935"
     CDS             4940..>8400
                     /locus_tag="VEV83_22935"
                     /inference="COORDINATES: protein motif:HMM:NF013524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C25 family cysteine peptidase"
                     /protein_id="HYK48059.1"
                     /translation="MRKYLLILSICFVCCRLAAQQYYNEWIDYSKTYYKFKLGSTGLY
                     RINQPNLPAPLQSVPAEQFQLWRNGKEVPIYTSVSSGPLPSSGYIEFWGERNDGKPDK
                     NLYKNPADQLSDKLSLETDTASYFLTVNAGVNLRLVDAPNNVNGNILPAEQSFTYHYR
                     YDFQTMINRGRAVSWGTNVYSSTYDMGEWWSSRDISPDSSLSVHAGNLYASNSGSGQL
                     NISVAGNSAVLGSRTVNVDINGANVINYSGLAGMSAAVLTTNVTSSQIGSADTKFTVS
                     MINGNPEGENDRIVVGFIDLSYPRQFNFGGASQFAFSMPATGQGYFLKITNFNSGLAT
                     PVLYDLTNNKRYAANTNVPGVLQFVLPASASNMDLVLVSENSLSLITNFLQRTFQNFS
                     VAANQGTYLIISNKILIGNNGPVQAYAAYRNSGAGGSFTSRIYDIDELVDQFAYGIKM
                     HPLSVKNFLKYARNNFPVAPKFAFLIGKAVTYDEARIHESSPYIDRLNLVPTFGWPAS
                     DNILASNDLGPVPATPIGRLAAVTPAEVDIYLKKITDYEKAQADSTHTIEAKAWMKNI
                     VHVIGADDPGLNAVLTADMNSYRRIVTDTASFGANVTTFNKTTSGSGGTISDALMSQL
                     FSDGISLINYFGHSSASVLDYNLNKPQNYNNPGKYPVFFVNGCDAGNIYSFDTTRFSV
                     YNSLSEAWVFAQNRGSIAYIASTHFGVESYLDAYITGFYNSFDHQNYNKPVSYNIRDA
                     ASYLVTTAGDFTGILHAEENVLHGDPALKINAHPKPDFVVEEPGVIITPTFVSVADNS
                     FKVKCYFYNIGKATGDSVSVLIQRKYPDNSTAVLFSARIPSVRFIDSVEVTVPIVATR
                     DKGLNAIIVTIDNTGQYDELSELNNTVTKQFFIYEDELKPVYPYDFSIVNKSNIKVYA
                     STANPVVAMRSYVMEMDTTELFNSAIKSTQTINSVGGVLEFNSTIPFTDSTVYYWRVA
                     PVPTSGAYHWNTSSFVYLPNAGFGFNQSHLYQHLKSVGDRIYIDSFSRRWTYNDIVSI
                     LTMYNAVYGHSGQYDADFQVQINGKTITSSACLGHSIIFNLFDPVTLKPYYNQNAPST
                     NPNGPFGGFMQSFGGSCTEQGHEYNFEFHYWDTTSRRQMRDFMDWIPDGLLVTVRLIY
                     DQPYDQTA"
BASE COUNT         2409 a         1844 c         1859 g         2288 t
ORIGIN      
        1 tcagtagcga gacaagttga ttgtgagcgt gttacccagt gttcagtgag tgattttttt
       61 gttacatttt gccactcact gaatcactca ctgaaagttt gaaatcagtt gatatttttt
      121 gatactgtca aagagcaaaa aagcccgcaa acatcagaat tttgcgagcc tttgacagat
      181 tttgatatcg ttctcagcgg agagagaggg attcgaaccc ccggaccttt tgggtcaacg
      241 gttttcaaga ccgccgcttt aaaccgctca gccatctctc cggcgcaaaa ataggcgcaa
      301 aaaataagca gccaaaaaac cgtcagatta tattatttca tttgagccat cttcgtccag
      361 ctaatgattt gaaaaataat tcgcgcttgt aggcatcaga tttcgtttca aacttttcaa
      421 gatagtggat gccatggaca attatgtttt gttgacctta cttttccagc gttgtgattt
      481 gcaattcttt tctgaaggtc cttgcaatgc tcgaaataat aacttgtgga ggttcggctc
      541 cttaaaatac atgtgtaata ggacataaaa aaatcacact tgagtgtgat catgtttatg
      601 attcgaaccg ccggaccatt tgggtcaacc gttttcgcag catttgcaaa caaaaccgcc
      661 gcttttcgtg gaaaaccgtt gggccatcta tgcggcgcaa agtagcacgc aaacgatatt
      721 cttccaaact caaaattatg tcctgataag cgctgacgtg caattggaat cgtgcacgtt
      781 tgttcggacg ggtgaccttt aacgctgatc caccaatttt cttgggggaa ttgcaaaatg
      841 tgcttcttga aattgtcatc tatcagataa cgcaacaggc ccgcgcgcat aaaaggcacc
      901 ggtatgttcg tgtctcgggt tcgcgtacaa gaaatgcacc ttttttgatg cttctgagaa
      961 tgaaaagaga ttcgatcacg ccttcatctt ctttgcccaa aacaaccatg gtttcaaatt
     1021 agaccagtag aacgtctaca tgctacgcgt gaataatcga aatcaattcg cagcgaagaa
     1081 aggtatcagg gaaaaccgga ttttgtttcc cttacgctgt tacttcatca ggttaagggt
     1141 aactattcct gtgatgatag aagcggcaaa actcataagc gtaccgatca agacatattc
     1201 cgcttctttg cgtgcctcac ttcctttaat atcattaaac cgcaagatcg actttgcggc
     1261 gatgaggaaa cctattcctt caaaatggtt attgataaca aacgtgaaca caagtattct
     1321 ttcaaacatg ccgatccatt ttcctgcttc actcaaactt gtaccagtgc ggtcaaacga
     1381 tccctcaatg tcttttctcc accgttgtgt ggcatatcca acaataaatg ccagcggaaa
     1441 aattgttacc aggtaacccg tcgcgatgag ccagaaatta taatcgttca tcaattgctg
     1501 aaaatgggtc gcagcccaac ccggcgcctg gtaaaagaca agccaaagaa taatcaacgt
     1561 aataatatgc atcgcctggt cgagtatgaa tgcggcgata gtgtcttttc ggtataactt
     1621 ccatagatca aggcaatagt ggcttacaaa cacaataacc ggtatcagcc aaatcgattt
     1681 atcgggagac aagagataga tgagtgctgc atgaatgaga gcgtgaacgt ataagaacca
     1741 ggaaccttgt ttatatactt ttttattctg aactaatttt ttgctttgca acaaaaaatc
     1801 tgcgaagaag tgagctgcaa accattggaa gagcaataca agcatgaggc aatataatta
     1861 aagtgctatt attgattcaa atctctgcag cataggattg atcacgctcc accctgctgc
     1921 ctggagccgc tgatgcacag aaggctggga gatatgtaac gctttcgcga tatcttcctg
     1981 ccgggtattc tgcagttgga aatacagtgc gtcggcctgg gcactgctca ggcgttccag
     2041 cagaaaattc aaagacgcac tgtgcacctc ccattcttcg ttgaaagatg tgtcttcggc
     2101 ggtgatggac atcagctcat tgcgcctttt gatttcatca atatgctggc cggatagcct
     2161 gaaagccgtc ccgtcagaag tgatcacgtt atcactggtg aaacttacat ccccgatacc
     2221 tatcgactgc cttattttaa aaccttcaat agctaaaaag caatacgtag agagcgcgag
     2281 acggagagct gcaactttat tcttggtaag cagtgcctgg aggctgtcgc ccctgaactg
     2341 ctgcgcctta aagtcgggat aagctttgtt cgtcttttta ataaaaacgt tcagcctgtc
     2401 ttgcagcttc ttccttttta aaggtgaaag ctttgacgag gctatgatat caccggttat
     2461 tacaatagcc tttgccgttt tcgccactgg acaattttta caaatatagt gctataatac
     2521 tataaacata aaatatagta tttaaatact ataatgcatt tatatagtga tatgacacta
     2581 taatagttgt caatgagccg gcagtagtat agcagcatct taaagtgtat taaccggaag
     2641 cttacgatgt tctttaacta agcgaaacat ttgcagaaac acggcgagta gtataaggcc
     2701 caaaccaata aagaaacttt tactgagtgt cttgttctca tgatagagaa gaaacgcgag
     2761 taaaatacca tacacaggtt caagtgtgag ggtaaggttt aaggtgaagg cgctgatgtg
     2821 ttttaatgcc cttatataca acatgaaagt taagatggtg cagcaccagc tcaggacgaa
     2881 aagccaaagc cagtcccact gatacggcat catatgtgtt ggcggaaata aaaaatcata
     2941 tagcggcatt aaaacagtta accctaagaa cccgccggta aattggtata atgctattct
     3001 ttcggcatca tggctggtta cgagtttttt attcattatc gacacgatca ccagaaataa
     3061 cgcggaaaga aggccaatgc agatcccaac agagtaggcg agattcgtca tataaataac
     3121 tgcaatgccc acaagagcca acaagcccag ggcaatttca tagggattga tcctccgcct
     3181 gaaagacaaa ggctctatca cggcactcaa aaggccagtg gtacttaagc acgttaaagc
     3241 gatagagacg tctgcgtatt tgatactgcc ataaaagaac agccaatgaa tagagagcat
     3301 cgttccgatc gctgcgatct taaaaaagtc ttttagcgaa atttcctgaa ttcgtttcga
     3361 aaaataaaac aggagccata aagttattat tgtgatgagc atccgccacc aaacgagcca
     3421 tgcttcgttg agggtgatgg cacgtcccag cacgccggta aatccccaca gaaaaactgc
     3481 aacgtgtaaa cgaatcagtg tggctctcat cggcgcaaag aaaaactaaa tcaccgattg
     3541 tagattagat cgaagatttc agatcatgca tttcagcaat cttcaacgag cgacgaaatc
     3601 gtaaatctaa aatcctggat cgtaaatcca gctgcgagcc cgacatcaac ataaacacac
     3661 gttcggccga aataaaagca gcgttttatc gtattaagat caatcaaaaa ctaagttgta
     3721 tcttgttcgc ctgtaaagac tactttttca gaatgaaaac ctgcggacgg ctgattcttg
     3781 tgatgatcct gaccaccggc accctttgcg gaaacagtca attccgtaaa tattccaatg
     3841 aatttttgaa catcggcgca ggagcgcgag gacttgcaat gggcggtgct caagtggcaa
     3901 gtgcagaaga cggcaatgcc ggctattgga accctgccgg ccttgtgaat gtggtcgctt
     3961 atccaagcat atcactcatg catgctgaat attttgcagg gattggtaaa tacgattata
     4021 tatcctctgc aattccgata ggaaatggtt accgcacact cggattttct cttttgagat
     4081 ttggtgtgga cgacatacca aatacattgt ttttggttga accggatggc tcgcttaatt
     4141 acaataacat tcaaagtttt tcttctgctg actatgcttt cttgatctcg tatgcgcagg
     4201 tgatacggga tgatgacaag gcgcaattca gttggggcgc caacacaaag atcatttacc
     4261 gcgatgtggg cagctttgcc acagcctggg gctttggctt tgacgctggt ttattgtaca
     4321 ggaccgcaac atggcgtttc gggatcgccg cacgcgacgt aacaaccact ttcaatgcgt
     4381 ggtctttttc attcaccgat gaagaaaaac aaatactata tttaacgaat aacgacatcc
     4441 cggtgcggtc tacggaaatc acatcgccaa ggcttgtgcc ggctgtcgga tataattttc
     4501 gatttgccga caaactgcat ttgcttaccg aggctgactt tgatgtgacg ttcgatggca
     4561 aacgcaatac gctgatcagc tcaaacccca tcagtatcga tccgaaattt gggatggaag
     4621 cgaacattag caacgtcgtt tttgtgagag cgggtgtttc aaattttcaa cgggctcttg
     4681 cggatggaga tacgctgaat caaaagaaag tctggatatt ccagccttcg atcggggccg
     4741 gatttaaagc aggaaatgtg gcgatcgatt acgctttcac gaatcttgcg aatcaaagca
     4801 acccgcttta tactaatgtg ttttctcttc gcattgacct ggcgccgaaa agcaaagaga
     4861 aaaaaacaag gggcagcatt ccggaagtgc aacggccggc gaaatctaaa aagaaagaaa
     4921 aaggaagcta tcctgttcaa tgagaaaata tttattgata ctgtccatct gctttgtttg
     4981 ttgccgtctt gctgcacaac aatactataa tgaatggatc gactactcca aaacgtatta
     5041 caaattcaag cttggctcaa cgggattgta ccgcatcaat cagccaaatc ttccggcgcc
     5101 tctgcagtcc gttccggctg agcaatttca attatggaga aatggaaagg aagttccgat
     5161 ctacacaagt gtttcatccg ggccgttacc ctcaagtggc tacattgaat tttggggaga
     5221 aaggaacgac ggcaaaccag ataagaatct atataaaaat cctgctgatc agctttcaga
     5281 caagttaagc ctggaaactg acaccgccag ttatttctta acagtgaacg cgggcgtaaa
     5341 ccttcgactt gtcgatgcac caaataatgt gaacggaaat atcttacccg ccgagcaatc
     5401 attcacatat cattatcgct acgactttca aacgatgatc aaccgtggcc gggcggtgag
     5461 ctggggcacc aatgtttatt cgtcaactta tgacatggga gaatggtgga gtagtcgcga
     5521 catatcgccg gacagttctt tatctgtgca tgccggaaat ttgtatgcat ctaattcggg
     5581 gtccgggcaa ttaaatattt cagttgccgg aaattctgct gttttgggaa gcaggacggt
     5641 gaatgtagat ataaacggag cgaatgttat caactattcg ggcctggccg ggatgagcgc
     5701 tgcagtacta actactaacg ttacctcttc gcagataggc tctgctgata caaaattcac
     5761 tgtctccatg atcaatggga acccggaggg tgagaatgac aggatcgttg tgggctttat
     5821 cgatcttagt tatccgcgcc agtttaattt cggcggtgct tcgcaatttg ctttttcaat
     5881 gccggctaca ggtcagggat attttttgaa gatcacaaat tttaatagcg gccttgcaac
     5941 gcctgttttg tacgatctca caaataataa gcgctacgct gcgaatacaa acgtacccgg
     6001 cgttttgcaa tttgtgctgc cggcttcggc gtcgaacatg gatcttgtgt tagtgagcga
     6061 aaacagccta tcgcttatta caaattttct gcaacgtact ttccagaatt tttctgtggc
     6121 tgcaaaccag ggcacctatc ttattatttc aaataaaatt ctcatcggca ataacggtcc
     6181 cgtgcaggcc tatgctgctt accgcaacag cggagcgggc ggttcattca cttccaggat
     6241 ctatgatatt gatgagctcg tggaccagtt cgcctacgga ataaaaatgc atccgctttc
     6301 tgtaaagaac tttttgaagt atgcgcggaa taattttccg gtcgctccga agtttgcctt
     6361 tcttatcggt aaggccgtaa cgtatgacga ggcaagaata catgaatctt caccttatat
     6421 agaccggttg aatctcgttc cgacatttgg ctggcctgcg tcggataata ttcttgcgtc
     6481 gaatgacctt ggcccggtgc ctgcaacccc tattggtcgg cttgcagctg taacaccagc
     6541 tgaagtagac atctatctta aaaagatcac agattatgaa aaagcgcagg cagacagtac
     6601 acatacgatt gaggcaaaag cctggatgaa aaacatcgtg catgtgatcg gcgcagacga
     6661 tcccgggtta aacgccgtgc ttactgccga tatgaacagt tatcgccgta ttgttactga
     6721 cacagcatca ttcggcgcga acgttaccac tttcaacaaa acaacgagtg gcagtggcgg
     6781 aacaatatca gacgcgctga tgagccaact gttcagcgat ggcatctcgc tgatcaatta
     6841 ttttggccat tcttcggcaa gtgttctcga ttataatttg aataagccgc agaactataa
     6901 caatcccgga aagtatcctg tcttttttgt aaatggttgc gacgccggaa acatttattc
     6961 ttttgataca acgcgtttca gcgtgtacaa ttctttgtca gaggcatggg tatttgcgca
     7021 aaaccgtggc agtatagctt atatcgcaag cacgcatttt ggtgtagaat catacctcga
     7081 tgcatatatc accggcttct ataattcttt cgatcatcaa aattataata aaccggtttc
     7141 gtacaacata cgagatgcgg cttcttatct cgtcactacc gccggcgatt ttacgggcat
     7201 tttgcacgcc gaggaaaatg tgcttcacgg agatcctgct ttaaaaataa atgcccatcc
     7261 caaaccggat tttgttgtgg aagaaccggg cgttatcatc acgccaacgt ttgtctcggt
     7321 cgccgataac agtttcaaag taaaatgcta tttctataac atcggcaaag caaccggtga
     7381 ttcggtttcg gtgctcattc aacgcaagta cccggataat agtacggctg ttttgttttc
     7441 ggcgcggata ccttcggtgc gttttatcga ttccgttgag gtgactgttc ccattgttgc
     7501 aacaagagac aaagggttaa atgcgatcat cgttacaatt gacaacaccg gccaatatga
     7561 tgagctgagt gaattgaaca acacggttac aaaacaattt ttcatttacg aagatgaact
     7621 gaagcccgtt tatccttacg atttttctat tgtaaataaa tcgaacatca aagtttacgc
     7681 gtcaacggca aatcctgtgg tggcgatgcg ttcatatgtg atggaaatgg atacgaccga
     7741 gttattcaac tcagcgatca aatcaacaca aacgataaac tcggtggggg gagtgcttga
     7801 atttaattcc accattccct ttaccgatag caccgtttat tattggcggg tggctcctgt
     7861 tccaacgagc ggcgcgtatc attggaacac ttccagcttt gtttacttgc cgaacgcagg
     7921 ttttggattt aaccagtcgc acctgtatca gcatttaaaa tctgtcggcg acagaattta
     7981 catagatagt ttcagtcgca gatggactta taatgatatc gtttcaatac ttacgatgta
     8041 taacgctgtg tatggccaca gcgggcagta cgacgcagat ttccaggtgc aaataaacgg
     8101 gaaaacgatc acgtcgtccg cgtgcctggg ccactcgatt atatttaacc tgtttgaccc
     8161 ggtaacactg aagccttact ataaccaaaa tgcaccttca acaaatccga atggtccttt
     8221 tggaggattc atgcaaagct tcggcggaag ttgtactgaa caagggcacg aatacaattt
     8281 tgaatttcat tactgggaca ccacaagtcg tcggcaaatg cgcgatttta tggattggat
     8341 cccggatggt ttgcttgtta cggttcgatt gatctatgat cagccctacg accaaactgc
//
LOCUS       DASQJI010000885        10735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_150007,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000885 DASQJI010000000
VERSION     DASQJI010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 10735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10735
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150007"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..707)
                     /gene="hisB"
                     /locus_tag="VEV83_22940"
     CDS             complement(132..707)
                     /gene="hisB"
                     /locus_tag="VEV83_22940"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HYK48060.1"
                     /translation="MSTAKRILFIDRDGTLIHEPVLGNIDDWSKLEFYPHVFKYMNLI
                     ATEFNYELAMVTNQDGLGTAYFPSEHFWPIHNFVIHAFENEDVFFSGVYIDPSLKEEK
                     SPNRKPRIGMVKHYVDNPEYDLQRSFIIGDRITDVQFAKNLGCKALWLNNHPGLGLKE
                     IENTEEELRATALALETTQWKHVYEFLKGQE"
     gene            841..1749
                     /locus_tag="VEV83_22945"
     CDS             841..1749
                     /locus_tag="VEV83_22945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018611134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HYK48061.1"
                     /translation="MKTSRRTFIKQAGITFAGTALLPRKILATGNATDFIVGIQLYSV
                     RDAMKKDPAGTLKKIAALGYTHVEYAGYENGKFYGYSPNEFKSLLSDLGLKMLSGHNG
                     LDATKWDKSQNEFTEEWVQTIQDAAAVGLQYMISPGVDESLCKNESDFKWYMELHNKT
                     GELCQKAGIKFAFHNESYEFDHYLNNVRLYDILLDTTDKSLVAQQIDIGNMYAPGGRA
                     MDYLKRYPGRFFSMHVKDVVKTNKQDNTYENTILGKGVVGVKEILEYARKTGTKHFII
                     EQEDYQDKTPLECAKEDLAAMKNWGF"
     gene            1803..2720
                     /locus_tag="VEV83_22950"
     CDS             1803..2720
                     /locus_tag="VEV83_22950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYK48062.1"
                     /translation="MRSSRRKFLRQTSTVLAGSALLSNNIFANEKATDHILAIQLYSV
                     RDDMKADPPGTLKKISAMGYRYVEHANYKERKFYGYSAADFKKFLADLGIKMYSGHTE
                     LKLEYWDDSKNDFTDVWKYTVEDAVTAGQQYVISPSLNEKVRTDQELLKKFMEVFNRS
                     GELCKKNSVKFGYHNHDFEFATKINDQLLFDYILQNTDRSLVAQQLDIGNMYGVGGRA
                     IEIMKQNPGRFELMHVKDEIASEKGEMNGKFESTVLGKGVLNVKEIVDYARKNGGTKH
                     FIIEQESYQGKTPLECVKEDFDVMKSWGY"
     gene            complement(2818..3210)
                     /locus_tag="VEV83_22955"
     CDS             complement(2818..3210)
                     /locus_tag="VEV83_22955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48063.1"
                     /translation="MQRIIAFITTLICVSCSKENSAPENPSTATTQWMIENVQGPDTG
                     KINDSIAFLVSWPFASGCDVLDSFVQTQQDYEVYVKALGHTNYGFCSDNAGIKTATFY
                     FFATSPGTYKLKFLNPDNSYLLHTIRIQ"
     gene            complement(3261..4184)
                     /locus_tag="VEV83_22960"
     CDS             complement(3261..4184)
                     /locus_tag="VEV83_22960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosylase"
                     /protein_id="HYK48064.1"
                     /translation="MKKLIFILLLATGLTRCSDPKKLTGSSGKEFPAELVHFIPYKSN
                     PVFAATGASTWDNQIRERGWIIREGRDWYMWYTGYTNIDSVKFLGLATSNDGYAWTRY
                     HQNPIYNSGWVEDVCVVRSGDIYYMFAEGKGDTAHMLTSTDRIHWTEKGNLDIRLTNG
                     SAINKGPYGTPAVLNQNNTWYLFYERDDKGVWLATSQDLKVWTNVQDEPVLKCGPEAY
                     DQFAVAMDQVIKYKGYYYGYYHASAFKDWHEWSSDVAVSNDLIHWKKYPGNPIVSNDK
                     SSPMIVNDGVRFRLYTMHPEVNVYLPENTGQ"
     gene            4296..6647
                     /locus_tag="VEV83_22965"
     CDS             4296..6647
                     /locus_tag="VEV83_22965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HYK48065.1"
                     /translation="MQNKLLDIEQELSQHFVGHTHLSFKKFIEYLKHRIQTEQSVRTK
                     FYRFALKKFDLHPELSSIVNVDQIENYGELFELIYASLLPLTFDENCNFWGLSLPMMP
                     RIFYGTNALYDVLVDRRTGKPKPAAISPMDDDGTHRQRFEMMYSFLLEKLYKIPSTRR
                     LEMVHSLFDHETNFQKFYRVHIDPRFIDIRHDKPLPEINFEILQTHVQEGTTADFLRE
                     QLPLSLFSFEGFSVLTITEITDEYAIESIKDSILNRRAHNDRFYYNRVIQSLKTFSGR
                     NDVEFGLLPMLRINNKLVFNDDNCLHSMLSEKIRMHSIAESTYLAAAENYSKNPRLVF
                     FKTITEEDQQRQPFLKILKKSGIQSYAMVPVFYGNNLAGMLEVYTTGENLLDEKILPK
                     LDSVLPLLSQLMQNSIDEFDTAVDNIIKEKFTSLQPAVYWKFNEAAWRYLKETSSKKE
                     KTEIETVFFEDVYPLYGAVDIRNSTAERNEAMHADLKIQFDLLVQTLTALKRQFNLGL
                     IDEKIFECREWINSIAHHLTANDEISLNTFLTQDIDPFLMHLKKNHPSSANLIESYFG
                     AIDPATGAACANKRALEESMQAINTAINNRLDQFKEELQRSYPCYFEKFRTDGIEYDI
                     YIGQSIAPEVPFDLLYLSNLRLWQLTSMAEIGRITNSLAPQLAKPLYITQLIFVHGNT
                     IDISFRNDERRFDVEGTYNIGYQVIKKRIDKVLIRNTTERLTQPGKIALVYFNRTDAD
                     EYLRYIYYLQEQNVLNDDLEQLDLEELQGVSGLKALRVGVNFD"
     gene            6766..7527
                     /locus_tag="VEV83_22970"
     CDS             6766..7527
                     /locus_tag="VEV83_22970"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008582087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYK48066.1"
                     /translation="MPIPIGDDDSGRRTTPVVNYLLIAINIIVFFYWQRWGNNVPFTF
                     AYATVPGEILSGHDVVTNSQIMTDPYTGDQFEMPGLQPTPIPVFLTLITSQFLHGGIA
                     HLFGNMLFLWIFGDNIEDAMGHIKYLVFYLLCGVLAGLSHVFSTWIFGQNLLIPSLGA
                     SGAISGVLGAYIFLHPTKGVHVWFYLFVVTLPAFLVVGLWFIFQVMSGLGTLGGEQAG
                     DVAYAAHIGGFIFGLLLVKLFVRRIPQPRQRVTWR"
     gene            7701..10130
                     /locus_tag="VEV83_22975"
     CDS             7701..10130
                     /locus_tag="VEV83_22975"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HYK48067.1"
                     /translation="MKRVFFLLLIAPFFAPAQKLPTIEDRTRGMKKYEGFFNFYWDED
                     RGQIWFEIPHLDSEVLYQTSLPAGLGSNDIGLDRGLLGSTRIVKFTRVGRKIFMLQPN
                     YDYRAITNDPNEKRTVQESFAQSTLWGFNEEAESNGSVLVNATALLLSDALHVANRLR
                     EQNQGSYRIDTSRSAIYLPYTKNFPLNTEFEATITLVNNDGNTGNLVEAVTPSPQAIT
                     LRMHHSFVQLPDKNYTPRVFDPRSSFGDISYYDYGTPISEPIIKYFICRHRLQKKEPN
                     ALMSEPVKPIIYYVDNGAPEPIRSALVEGASWWNQAFEAAGYKNAFEVKILPDSADPM
                     DLRYNMINWVHRSTRGWSYGAAVVDPRTGEIIKGNVTLGSLRVRQDYLIAQGLLAPFE
                     NGIPADDKMLKMALARIRQLAAHEVGHTLGLMHNYSASTVDRSSVMDYPHPLVRVNNA
                     GEIDLSNAYDNKIGEWDKVAIMWGYADLSAAANENDSLNAILTNAFKKGLRFLTDQDA
                     RPAGALSPYAHLWDNGGNAIDELKEVMKVREEALKQFGENNIRAGMPMAMLEDVLVPV
                     YFYHRYQLEAVTKLVGGMDYNYALRGDGQLVTKPLSKEEQLKALNAVVSCIDPKVLML
                     PESIVSIIPPRPAGYAASGELFKKRTGLAFDALSPAETAADFPLSFLFNAERLSRMEQ
                     YAVDGGLGVGEMIDSLINKTWKAPRQTGMKKLIQQQTEQVLLTYLLSTSINADVSFQA
                     RADAKNALSELKTFIESKKKISKDASYTAHLILALDRMNSPGDAKPTLHKEIPPGAPI
                     GCDFDDDDMSY"
     gene            10235..>10735
                     /locus_tag="VEV83_22980"
     CDS             10235..>10735
                     /locus_tag="VEV83_22980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48068.1"
                     /translation="MKNLHALLLTASLLWFADSAIAQAKQQTTTSQENEITISISGIE
                     YDDADFAAFKENLKANQHVKNVKSSYAQGTARINCTFNGSADELWDEVPVKIKQAFKV
                     TAVDKNTITLASKNLAASNAPATNANSASNQIDTAGCNCCVYFPLCKYDETRSFQGVV
                     YKGLTFD"
BASE COUNT         3178 a         2323 c         2399 g         2835 t
ORIGIN      
        1 gctttcgcgt tgaagtagca gtttattttc tgatcacatt ttccgtgatg ttgattgccg
       61 tgtcctggtt gctgcctcca tttctccgcg gttagcaata aaccatttac ccaattaacc
      121 agttaaccac ttcactcctg ccctttcaaa aattcataca cgtgcttcca ttgtgttgtt
      181 tcaagcgcca gcgccgttgc gcgtaattcc tcttcagtgt tctcaatttc cttcaggcca
      241 agtcccggat gattgttcaa ccaaagggcc ttacatccaa gattttttgc aaactgcaca
      301 tccgttatac gatctccaat aataaacgaa cgctgaagat catactcagg attatcgacg
      361 taatgtttga ccataccaat gcgcggtttc ctgtttggtg acttttcttc ctttagagat
      421 gggtcaatat aaactcctga aaaaaacaca tcttcatttt caaaagcatg tatcacaaaa
      481 ttgtggatcg gccaaaaatg ttctgatggg aaatatgctg taccaaggcc atcctggttg
      541 gtcaccatcg cgagctcata attgaattcc gtcgcgatca aattcatgta cttaaaaaca
      601 tgcgggtaga actcgagctt gctccagtca tcgatattac ccaaaacagg ttcatggatc
      661 aaagtcccgt cccggtcgat aaaaagaata cgttttgctg tgctcataac ggcgcaatgt
      721 taggaaaaat aattttcccg ggccttaaaa cgatcgttgc tactgttacg aaattatttt
      781 tatctcattg tacaactatt ccctattttt aaaacctgtt gttctaccta acgatcgatt
      841 atgaaaacat caagacgtac attcatcaaa caggctggaa ttacatttgc cggcaccgca
      901 ttacttccgc gcaaaatatt agccacaggc aatgcaaccg actttatcgt cggtattcaa
      961 ttgtattcgg tgagagacgc catgaagaaa gatcctgcag ggacgctcaa aaaaattgct
     1021 gcgctcggct acacgcatgt tgagtatgcc ggatacgaga acggcaaatt ctacggctac
     1081 tcacccaatg aattcaagag cctgttgagt gacctgggtt taaaaatgct cagcggtcac
     1141 aatgggttgg acgcaacaaa atgggataag tcgcaaaatg aatttaccga ggaatgggtg
     1201 caaacgatcc aggacgccgc tgctgttgga ttgcagtata tgataagccc gggtgttgac
     1261 gaaagccttt gtaaaaatga aagcgatttc aaatggtata tggagctgca taataaaaca
     1321 ggagaacttt gccagaaagc cggtatcaaa ttcgcatttc acaatgaaag ctacgagttc
     1381 gatcactatc tcaacaacgt tagattatac gatatccttt tagatacaac agacaaatcc
     1441 ctggtcgcgc aacaaataga tatcggtaac atgtatgcac cgggaggcag ggcaatggat
     1501 tatttaaaac gctatcctgg ccggttcttt tcgatgcatg taaaagacgt agtaaaaacc
     1561 aataagcaag acaacactta tgaaaacacg attctcggca aaggtgtagt tggcgtaaaa
     1621 gagatactgg aatacgcgcg aaaaacgggc accaaacatt tcatcatcga gcaggaggat
     1681 taccaggaca agacgccact cgaatgcgcc aaagaagatc ttgctgccat gaagaactgg
     1741 ggattttaga aactaatttc cgcgaagcga ggcacttaat cttttcagca ataagaaaaa
     1801 ttatgagatc gtcaagaaga aaatttctaa gacaaacttc aacagtattg gctggctcag
     1861 ccctgctttc gaacaacata tttgccaatg aaaaggcgac cgatcacatc ctggccattc
     1921 aattgtattc agtgcgtgat gacatgaaag cggatccacc aggcacattg aagaaaattt
     1981 cggcgatggg ttaccggtat gttgaacatg caaattataa ggaaagaaaa ttttacggtt
     2041 atagcgcagc agatttcaaa aaatttcttg cggatctcgg catcaagatg tacagcggcc
     2101 acacagaatt gaagttggaa tactgggatg actcgaaaaa tgatttcacg gatgtttgga
     2161 aatataccgt tgaagatgct gtaacggccg ggcaacagta tgtcataagt ccgtccctaa
     2221 acgaaaaagt gagaacagac caggaactgc ttaagaaatt tatggaagtg tttaaccgga
     2281 gcggggaatt gtgcaaaaaa aatagcgtca aatttggtta tcataaccat gattttgaat
     2341 ttgcaacaaa gatcaatgat cagctattgt tcgattacat tttgcagaac acagatcgat
     2401 ctttggtagc tcagcaatta gacattggca acatgtatgg agttggcggc agggcgatcg
     2461 agatcatgaa acaaaacccg ggacgatttg aactaatgca tgtaaaagac gagatcgcaa
     2521 gtgaaaaggg tgagatgaac ggtaaatttg aaagtaccgt gttaggcaaa ggcgttttga
     2581 acgtaaaaga aattgttgat tacgcgcgca aaaacggagg cacaaaacat tttattattg
     2641 aacaggaatc ttaccaggga aaaacgccac tcgaatgcgt taaagaagat tttgatgtga
     2701 tgaaaagttg gggctactag cccaaaattt tttggcttac tactgcttat ataaaagaat
     2761 cccgcaccgg gctcaggcgg gatttttgtt tttaaggcac tatatccatc agcatgacta
     2821 ctgaattcta attgtgtgga gcaaataaga attgtcggga ttcagaaatt tcagtttgta
     2881 tgtgcctggt gatgtggcaa aaaagtaaaa cgtcgctgtt tttattcctg cattgtccga
     2941 gcaaaaacca tagttcgtgt gacccagtgc tttcacgtac acttcataat cctgctgcgt
     3001 ttgtacaaag ctgtcgagca catcgcagcc actggcaaat ggccacgaca ctaagaaagc
     3061 gatgctatca tttatcttac cggtgtccgg cccctgaacg ttttcgatca tccactgagt
     3121 agttgcagtg gaaggattct ccggcgcact attttctttc gaacacgaga cgcatataag
     3181 cgtcgttatg aaggctatga tcctttgcat tgattatatc gactattctt gtcagcaaat
     3241 cgttgcatgc gtccgtgctt tcactgaccg gtattttccg gcaggtaaac atttacttcg
     3301 ggatgcatag tatagaggcg aaagcgaact ccgtcgttta cgatcatcgg gctcgattta
     3361 tcattgctga ctatcgggtt gcccggatat tttttccagt ggatgagatc atttgaaacg
     3421 gcgacgtcag acgaccactc gtgccaatct ttgaacgccg atgcatgata gtatccatag
     3481 taataacctt tatacttaat cacctggtcc atcgcgacag caaattggtc gtacgcttcc
     3541 ggcccgcatt ttaacacagg ttcatcctgc acgttcgtcc aaaccttaag gtcttgcgaa
     3601 gtagcaagcc acacgccttt atcatctcgt tcgtagaaaa gataccaggt attattttga
     3661 tttaagactg caggcgttcc ataaggccct ttatttattg cgcttccgtt tgtaagacga
     3721 atatcgagat tgcctttttc cgtccagtga atccgatctg tagatgtgag catatgagcg
     3781 gtgtcacctt tgccttcagc gaacatataa taaatgtctc ctgatcttac cacgcataca
     3841 tcctctaccc aaccactgtt ataaattggg ttctggtgat atcttgtcca tgcatagcca
     3901 tcatttgaag tggcaaggcc gagaaatttt acgctgtcta tatttgtata gccggtgtac
     3961 cacatatacc aatcgcggcc ctcgcggatt atccagcctc tttcacgtat ttgattatcc
     4021 cacgttgaag ctccagttgc tgcaaacacc gggttacttt tatatggaat aaaatgaaca
     4081 agctctgcag gaaattcttt gccagaacta ccggttagtt tttttggatc tgagcatcgt
     4141 gtaaggccgg tcgccaataa taaaatgaaa attaattttt tcatgaatcg gttacaggca
     4201 cgaatataaa aatgtttgcg tcatttgctc tcactgtgac agaaaggttg tcttgcgtcg
     4261 attagttatt tttgtggtct attcgtttct ttcttatgca aaacaagttg cttgatattg
     4321 aacaggagtt gtcgcagcac ttcgtgggcc atacgcattt atcattcaaa aaatttattg
     4381 aatacttaaa acacagaatt cagaccgagc agagcgtacg cacgaagttc tacaggtttg
     4441 cacttaaaaa atttgacctt catcctgagt tatcatcgat cgtaaacgtt gatcaaatcg
     4501 aaaattacgg tgaacttttt gagctcatat atgcttccct tctgccattg acgtttgacg
     4561 agaactgtaa tttctggggt ttgagcttac cgatgatgcc gaggatcttt tatggcacga
     4621 atgccttgta cgacgttctg gtagacaggc gtacgggcaa gccaaagcct gccgctatca
     4681 gccctatgga cgacgacggc acgcatcgcc aaaggttcga gatgatgtat tcgtttctgc
     4741 tcgaaaaatt atataaaatt ccatcgacaa gaaggctgga gatggttcat tcgttattcg
     4801 atcacgaaac aaatttccaa aaattttacc gggtacatat cgatccgcga tttattgaca
     4861 tcaggcacga caaaccattg cccgaaataa actttgaaat attacaaaca catgtacagg
     4921 agggcactac ggccgatttc ctaagagaac agcttccgct ttccctgttt tcgtttgaag
     4981 gattttcggt tcttactatt accgagatca cggatgagta tgccattgaa agcatcaaag
     5041 attcaatact gaaccggcgc gctcataacg atagatttta ttacaaccgt gttatccagt
     5101 cattaaaaac attttccggc cgcaacgatg tagaatttgg tttgctgcca atgctacgta
     5161 taaataacaa acttgttttc aatgacgaca attgtttgca tagcatgttg agcgaaaaga
     5221 tcaggatgca cagcatcgcg gaatccacgt acctcgcagc cgcagaaaat tattcgaaaa
     5281 atccaagact cgtttttttt aaaacgatca cagaagaaga tcagcaacgg cagccatttc
     5341 taaagatcct gaagaaatcg ggtatacaat cgtacgcgat ggtgcccgta ttttatggga
     5401 ataacctggc tgggatgctt gaagtttata cgacgggcga gaacttactc gacgaaaaaa
     5461 tactcccgaa acttgactcg gtgcttccat tgctttcaca actgatgcaa aattcgatcg
     5521 atgaattcga caccgcggta gacaacatta tcaaagaaaa atttacctca ctgcaacccg
     5581 ccgtttactg gaaattcaat gaagcggcct ggcgttactt aaaagagacc tcttcaaaaa
     5641 aagagaagac agaaatagaa actgtatttt ttgaggatgt ttatccttta tacggcgcgg
     5701 tcgatatacg aaactcaaca gccgaaagaa atgaagcaat gcatgctgat ttgaagatcc
     5761 aattcgactt gctggtacag acgttaacag cgctgaaacg gcaatttaat ttggggttga
     5821 tagatgaaaa aatattcgag tgcagggaat ggatcaatag cattgcgcac cacttaaccg
     5881 ccaacgatga aataagcctg aacacgtttc ttacccagga catagatcct tttttgatgc
     5941 acctgaaaaa aaatcatccg tcatcagcaa acttgatcga gtcttatttt ggcgccattg
     6001 atccggcgac cggcgccgct tgtgcaaata aacgcgctct cgaagaatcg atgcaggcga
     6061 tcaacacggc aattaataac cggcttgacc agttcaaaga agagctgcaa agatcttatc
     6121 catgttactt cgaaaaattc aggaccgatg gaattgaata cgatatttat attggccaat
     6181 cgatcgcgcc ggaagtccct ttcgatctcc tttacctcag caatctccgc ctttggcaat
     6241 tgacatctat ggcagagatc ggcaggataa cgaattcgct ggcaccgcaa ttggcaaagc
     6301 cgttgtacat cacgcagctc atttttgtgc acggcaacac gatcgacatc agctttcgaa
     6361 atgatgagag aagattcgat gtggaaggca cttacaacat aggataccag gtgatcaaaa
     6421 agcgcataga taaagtgctt attcgaaata caacggagcg attaacacaa cccggtaaga
     6481 tcgcgcttgt ttatttcaac cgaactgatg ctgatgaata cctgcgctat atttattacc
     6541 tgcaggaaca gaatgttttg aatgatgatc tcgaacaact tgacctcgaa gaactgcagg
     6601 gagtgagtgg tttgaaagct ctgagagtgg gtgtaaattt tgactaagcg aaaaatgcgg
     6661 caatatttat ggcctgattt ttcatcatat aatgaaccaa atggaagatc agttaagaga
     6721 ctcggaccac ggaacaacat ttgcatcatc aacatctaaa aatttatgcc cattcctatt
     6781 ggagacgacg actccggcag gcgaaccaca cctgttgtaa actatttgtt gatcgcaatc
     6841 aacatcattg tattttttta ttggcagcga tggggaaata atgtgccctt tactttcgca
     6901 tacgctaccg ttccgggcga gatcctgtct ggtcatgatg ttgtcaccaa cagccagatc
     6961 atgacggacc cttacacagg ggatcagttt gagatgcccg gcttgcagcc aacgccgatc
     7021 cctgtcttcc ttacactgat cacatcccaa ttcctgcatg gaggcatcgc acacctgttt
     7081 ggcaacatgc ttttcctgtg gatatttggc gataacatcg aagatgcgat ggggcatata
     7141 aaatatttgg tcttctattt attatgcgga gtgctcgcag gacttagtca tgtattcagc
     7201 acatggatct tcggccaaaa tttactcatt ccttcgctgg gcgcatcggg cgcgatctca
     7261 ggtgtgttgg gggcatacat attcctgcat ccaacaaaag gcgttcacgt ttggttttat
     7321 ctcttcgttg tcacgcttcc tgcatttctt gtcgttgggc tatggttcat cttccaggtg
     7381 atgagtggtt taggcactct tggtggagaa caggcagggg atgtagcata cgcagctcat
     7441 atcggaggtt tcatctttgg gctcttgctt gtaaagctct tcgtgaggcg catccctcaa
     7501 ccaagacaac gagtcacgtg gagatgaaat gctgtaagct ttcggagtta tcatgtccag
     7561 tatcaaacgc cgcagctgaa taaaaaattc agaggcaagg cgatctcaat catattacgg
     7621 atccgaaatc taagatccgc agtcaaccat tatctgcaag cgatgaagtt ttttcataac
     7681 cttgtagaaa atcactgctc atgaaaaggg tctttttcct gctgctgatc gcgccatttt
     7741 tcgcaccggc tcaaaaactt ccaacgatcg aagaccggac ccgcggcatg aaaaagtatg
     7801 agggtttttt caatttttac tgggatgaag acaggggaca gatttggttc gagatacctc
     7861 acctcgactc tgaagtttta tatcagacat ctttgccagc aggtttagga tcaaatgata
     7921 tcggccttga tcgcggcctg ctgggtagca cccgcatagt gaaattcacg agggtcggaa
     7981 ggaagatctt catgctgcag ccgaactacg attatcgcgc catcacgaac gatccaaacg
     8041 agaagcgaac agtgcaagaa tccttcgctc aatccacttt gtggggcttc aatgaagagg
     8101 cagaatctaa cgggtcagtg ctggtgaatg caacagcgct tttattaagc gatgcgctcc
     8161 acgtagcaaa caggctccgt gaacaaaacc agggcagcta tcgcattgat acttcacggt
     8221 cagcaatata tcttccctac acaaaaaatt ttccgctgaa cactgaattt gaggccacga
     8281 taacgctcgt caataatgat ggcaataccg gcaatttggt agaggcagta acgccatcgc
     8341 cgcaagcgat cacactgcga atgcatcatt cgttcgtcca attgcccgat aaaaattata
     8401 cgccgagggt tttcgacccg cgttcaagct tcggtgatat ttcgtattat gattatggta
     8461 cgccgatatc agagccgatc ataaaatatt ttatttgccg tcaccgactg caaaaaaaag
     8521 agccgaatgc tttaatgagt gagccggtaa aaccaatcat ctattacgtg gacaacggag
     8581 cacctgaacc aatacgatcc gcgttggttg aaggtgcaag ctggtggaac caggcatttg
     8641 aagcggccgg atataagaat gctttcgagg tgaaaatttt gcctgacagc gcggacccga
     8701 tggacctacg gtataacatg atcaattggg tacaccgcag cacgcgcgga tggagctacg
     8761 gcgctgcggt ggtcgatccg agaacgggtg aaataataaa aggaaatgta acactcggat
     8821 cgcttcgtgt gaggcaggac tacttaattg cgcaaggctt gttagctccg tttgaaaatg
     8881 ggatccctgc cgacgataaa atgttgaaga tggcgctcgc gcgcataaga caattggctg
     8941 cgcatgaagt aggacacacc ctcggcttaa tgcataatta ctccgccagc actgtcgatc
     9001 gcagcagcgt aatggattat cctcatccat tggtgagggt gaataacgcg ggcgagatcg
     9061 accttagcaa tgcatatgat aataagatcg gcgaatggga taaagtagct atcatgtggg
     9121 gatatgctga cctttctgca gcagcaaatg aaaatgattc tctcaatgcg attcttacaa
     9181 acgctttcaa aaaaggattg cgatttttaa ccgaccagga tgcgaggccc gcaggcgcac
     9241 ttagtccata tgcacatctc tgggacaatg gcggcaacgc gatagatgaa ttgaaagaag
     9301 taatgaaagt gagagaagag gcgctaaaac aatttggcga gaataacatc agggccggca
     9361 tgcccatggc aatgctcgag gatgttctgg tacccgttta tttttatcat cgttaccagc
     9421 tcgaagcagt aactaagttg gttggtggaa tggattataa ttatgcgctg cgcggagacg
     9481 gtcaacttgt aacaaagccc ttatcaaagg aagagcagct aaaagcgcta aacgcagttg
     9541 tgagttgcat tgatccaaaa gttttgatgc tgcccgaaag cattgtctct atcattcctc
     9601 cgcgccccgc aggttatgct gcatcaggag aattattcaa aaaacgaact ggcctcgcgt
     9661 tcgacgcatt gtcgcctgcg gaaactgctg ctgactttcc attgtcgttt ttattcaatg
     9721 cggaacgttt aagccgcatg gaacagtacg cggtggacgg tggtttgggt gtcggcgaaa
     9781 tgattgactc attgatcaac aaaacgtgga aagcgccaag acaaacggga atgaagaaac
     9841 tcattcaaca acaaacagag caagtgcttc tgacatacct gttgagcacg agtataaacg
     9901 cagacgtttc tttccaggcc agggccgatg caaaaaacgc attgagcgaa ctaaaaacgt
     9961 ttatcgaatc aaaaaagaag atttcgaaag atgcgtctta caccgcacat ttgatccttg
    10021 cgcttgacag aatgaattcg ccgggtgatg ccaaaccgac tttacataag gagattccgc
    10081 ccggtgcgcc tataggttgc gattttgacg acgacgatat gagttattag aatccttcag
    10141 cagaaaaaaa atacgttgaa tatcttttga aaacttttaa attaatttag ctgcaggaac
    10201 ttttgttaca aaatatccga cttgatagac tgctatgaaa aatttacacg cactgctgct
    10261 tacggcgtca ctcctatggt tcgctgattc cgcaattgcg caggcaaagc aacaaacaac
    10321 aacgagccag gaaaacgaaa taacaatttc aatctccggc attgaatacg acgatgctga
    10381 ttttgctgcg ttcaaagaaa atctgaaagc gaatcagcat gtaaagaatg tgaagtcatc
    10441 ttatgcgcag ggaacagcaa ggattaactg tactttcaac ggtagtgccg acgaattatg
    10501 ggacgaagtg ccggtaaaaa taaagcaagc gttcaaagtg acggcggtag ataaaaatac
    10561 aattacgctc gcttctaaaa acctggcagc tagtaatgca cctgcaacaa acgcgaacag
    10621 cgccagtaat caaattgaca cggcgggatg taactgctgc gtgtattttc ctttgtgtaa
    10681 atatgacgag acaagaagtt tccagggcgt tgtgtacaag ggcctcacat tcgac
//
LOCUS       DASQJI010000886         5596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_3068984,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000886 DASQJI010000000
VERSION     DASQJI010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 5596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5596
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3068984"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(322..2024)
                     /locus_tag="VEV83_22985"
     rRNA            complement(322..2024)
                     /locus_tag="VEV83_22985"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(2635..5522)
                     /locus_tag="VEV83_22990"
     rRNA            complement(2635..5522)
                     /locus_tag="VEV83_22990"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1605 a         1341 c         1008 g         1642 t
ORIGIN      
        1 atccagcgag atatcctgct aatactcggg taaaattaaa aaaatcgatc atactaaaga
       61 ttattctcat taagtagtga acccacttaa ttgacatacg tttaaaaatg tcaatttata
      121 aaataatcta caccgagttt aacatactgg tccagcaacc atgtattcag aaaccttggg
      181 atactggaat tacaaatcac cccgattttc gcagataatt gcatcctttc tcgtaattag
      241 aatcgagcca tccattggct aggatttttt taataatttc ctatatcacc aatcaactaa
      301 cgattcgaat tttgtttttt taagtggaat gatccatccg caggttcacc tacggatacc
      361 gtgttacgac ttcttcatcc tctaaatgat aaggctcaaa acactttcaa caaaaaatat
      421 cgttgtccat gtattttgcc ggaccatcca atcggttgaa gcgacgggcg gtgtgtacaa
      481 agggcaggga cataatcagc acaagataat gacttgtcct tactaggaat tccttgttca
      541 cgactgaaat tgcaacaggc gatccctacc acgagtatat ttcaggatta ctgatttctt
      601 tcgaaacaaa aacctgctat tatactcatt gtagcacacg tgcagcccag gccatctaag
      661 ggcatcacag acctgttata ggctcggact tccctgagat agaaactcag tgtcccaata
      721 agtaatcaaa accaagaaaa tcttagtctg attatttaat acgtcgaggt ctcgtccgtt
      781 atcggaatta accagacaag tcaccccacc gactaagaac ggccatgcac caccacccat
      841 agaatcgaga aagaaatatt catctgtcaa tcataaaaat gtctgggcct ggtaaggttt
      901 cccgcgttga gtcaaattaa gccgcaggct ccactcctgg tggtgccctt ccgtcaattc
      961 ctttaagttt cagccttgcg accatactcc ccccagaacc cagatactta gatttctcct
     1021 gaagtgccga cggcgaaagt atagattgca gccgaccctt agtcggcatc gtttacagtt
     1081 gggactacga cggtatctaa tcgtcttcga tcccccaact ttcgtccttg attaacaggc
     1141 aagtactagg taaatgcttt cgcattagat cgtctttgct gggtcttaga atttcacctc
     1201 tctccagcaa gtccggatac ccccgtatat ccatatcaat cattactcag cctcaaatac
     1261 caacaaatga agttgagcca tatattgtta tcccatgcta agctgtaaaa gcgcaagccc
     1321 ggttggaaca cctcaattca ctcaaagtaa catgaagcaa ctaaaaaagc agcttcaacc
     1381 aaggatcatc tgactatgag ccatttgaac cttgggaaat tcaactacgg acgtttcaac
     1441 tgcaacagac ttaatatatg ctactggagc tggaattacc gcggctgctg gcaccagact
     1501 tgccctccag ttgttttacg aggcaccact ttaaatacct ccctttacaa tcacaaggca
     1561 attgccttgc gctgttattt ctggtcacta cctcaccatt tcggcattgg gtaatttgcg
     1621 cgcctgctgc catccttaga tgtggtagcc atttctcagg ctccctctcc ggaatcaaac
     1681 cctaattccc cgttacccgt cacagccgcg gtaggccaat accctaccgt cacgagctga
     1741 taggtcagaa gctgatacga gacgtcgtaa acaatccgag aatttgtctt gatccttttg
     1801 aggcattact gcctctggaa aaccaatagc aaagacacta caaaagtaga atgtattagc
     1861 tccagaatta ccaaggatat ccatccaaaa agattctcgt gaacattaca actgttctaa
     1921 tgagcttttc gcagtttcgt tgtatgaaaa cttatacttg cacttgcatg gcttaatctt
     1981 tgagacaagc atatcactac tggcaggatc aaccaggttg gtagaacatt acaaaagttt
     2041 gatttttatc taatatctta actattagca gttcatcaat caaattatgc aaagacagca
     2101 gaaatttcaa aacactatca cactatcatt aatctacaaa agcaactcat aaaaattaca
     2161 acaacagact tatgcttgta ttttccaaat ctcaccattt cattaagaat atttcttaat
     2221 gctggtctac gaatatgctg atttcttggg ggaaaaaaag atacgatatt ttgttggtcc
     2281 acaaaattgt gaaagtcagg cggggattat ttctgaacca taaatcagat ccattataag
     2341 attagtggca tgatcaatgg ctttaccctc gcagcgcgca gcgtaatgat cagtgaagaa
     2401 tctcaaaaag aatgaattat atgtaaaagg acacaaatcc ggatccaggt tcatttttgg
     2461 ctgcctatgg cgaattgaag atcccgatta tatttatacc agtgcatttt acttccaata
     2521 tctctcagcg gattgcaagg ctttgctcac tctcacgctt acaagattca gaagcaatct
     2581 gatcgtctat cagtaatgct atacacattg gaaatgagat taatctttta accgcaagaa
     2641 taattttaac attatttgat attcttccta tgtgttgaca tggattacca gactggattc
     2701 tgatttagag gcgttcaatc attatccagg aagcgtagct ttccagcact gttgtctcca
     2761 acaactgggt taccagaggc ttcgcccaac agttcctctc gtactacgct ggactactgt
     2821 ctccgtgtca ttcataagta gggtaaaact aacctgtctc acgacggtct aaacccagct
     2881 cacgttccct attaacgggt gaacaatccg acattttgag acttctgcgt cccaatgata
     2941 ggaagagccg acatcgaagg atcaaaaagc aacgtcgcta tgaacgcttg gctgccacaa
     3001 gccagttatc cctgtggtaa cttttctgtc acctctagct agaactttcc tagatctaaa
     3061 ggatcgatag gccatgcttt cgcagttcgt attcgcactg aaaatctgaa tcaagctgac
     3121 ttttctcctt tcagtctacg agagatttct gttctctttg agtcaacctt agggcatctg
     3181 cgttgcagtt tagcagatgt gccgccccag ccaaactccc catctgaata tttcctccaa
     3241 gaacctgcca caaggggata cttgaccact attagtgtta tgtttgccac agagtaagtt
     3301 gaacaacgtc ggcagtagtg gtgtttcatt gacgccaaag ctcccactta ctctacaccc
     3361 accaagtcat tcgacaattc agactagagt caagctcaac agggtcttct ttccccgctt
     3421 attttgccaa gcccgttccc ttggctgtgg tttcgctaga tcccagacgg ggacagtagg
     3481 aatctcgtta atccattcat gcgcgtcgta aattacacga cgaggcattt ggctacctta
     3541 agagagtcat agttactccc gccgtttacc cgcgcttaag cgtatctctt cgcaataaca
     3601 ttcagagcac tgggcagaaa tcacattgcg tgaaaaacta gtgtgtttat cgcaatgctt
     3661 tgttttaatt aaacagtcag attcctcatg tctgtaccag ttctggaata actgattata
     3721 atgcacaata gcaaaaaagc tatctacctg caacataagt tgaggcagat atttgcgcaa
     3781 acagtttcca gagccaatcc tttttccaaa gttacagatc taatttgccg acttccctcg
     3841 tctgcgttac tctatcgacc agaggtttct aacctaggac acctgctgcg gtttatggta
     3901 cggatgcatg atgtgtatga ttccctggat tttcaaagac cgctaaaacg tactgaacct
     3961 gaaaacaggc ttttcccagc cgttcaacca tttctccagt caacctgatt cgatggtgtc
     4021 atgctgttaa aaagtgatta gtacacttct cagtagctca tgcagcgtcc aggctcataa
     4081 tgttaccaca acccactatg cagaaaagga attttagccc ttttcccttt cgaacgagaa
     4141 ctgaatgttc tttattttcg aaacgtgaat gattccttag gaccgtctaa cccattgaca
     4201 agtgatgttc caatggaacc cttatccact tcggtcgtca aaggttttat ttgactagtt
     4261 gctactacca ccaagatctg cactagggac agctcacaac ggccttacgg cgaattttca
     4321 cagctgtccc cacgcctccc tacacatcag catattacgc tgatggctca atattggcca
     4381 atggtttaag cgccatcaat tttcagggct gtttcattcg gtaggtgagt tgttacacag
     4441 tcctcagcgg atttcgactt ccatgaccac cgccctactg tctccatgaa acaacacctt
     4501 ttatggtatc tgatcagcca ttgtttggcg ccttaatcga gcgttaggag catccctcat
     4561 cgccagtact gcttaccagg actggcccac tatgggacag tattcatttg taatctgttg
     4621 ttattccaga aaaacaatca tatcggttta gagtttgaga ataggttaag ggctttatgc
     4681 ccccaattcc tctaatcatt gactttacca gatataacta aattgtcacc aagctatcct
     4741 gagggaaact tcgggaggaa ccagctacta gatggttcga ttagtctttc gcccctatac
     4801 gctggtctag caaacgattt gcacgtcagt attgctacga gcttccatca gggtttccct
     4861 tgacttcgcc ctgcccacgc ataggtcacc atctttcggg tctgaacata catactccta
     4921 ctcaaacgtt tagtcggtag ttactgaacc gtaaaattgc tttcacttcg acaagaattt
     4981 aattattctt tatctcgcat gcatattcaa ctccttggtc cgtgtttcaa gacgggcctg
     5041 aatactattt atagcaaaat attcatttaa tattttgcaa aacagaaatt cagattccgc
     5101 ctagccaatt tcagatttct atttctcctt tcgaagtaca tcaacgttcc ctcatggtac
     5161 ttgtttacta tcgatttcta atttatattt tgccttggat gaaagttacc acccattcac
     5221 attctacctc caaagaatgc tactcagttt cgttagccat tgttctcttt gaatactagt
     5281 catgaactat attttgagag ctgtttcaaa ctcttcatca tattgagaac aaattacggc
     5341 cagcggtgca cactacgaca aacgtcgttt aacaccaagg gctgattcct tttcgttcgc
     5401 cactattaag gaaatccttg ttagttttta gtacttcgct taattatatg cttaaatcca
     5461 gcgagatatc ctgctaatac tcgggtaaaa ttaaaaaaat cgatcatact aaagattatt
     5521 ctcattaagt agtgaaccca cttaattgac atacgtttaa aaatgtcaat ttataaaata
     5581 atctacaccg agttta
//
LOCUS       DASQJI010000887         6930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1686189,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000887 DASQJI010000000
VERSION     DASQJI010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 6930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6930
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1686189"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..2950
                     /locus_tag="VEV83_22995"
     CDS             77..2950
                     /locus_tag="VEV83_22995"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYK48069.1"
                     /translation="MQKMKKLLHLIFFILTFFLSHAQKTYWQQQVNYHIDVKLNDTDN
                     SLTAFEKMQYINNSPDTLFYIWFHLWPNAYKNDRTAFSEQLLKNGSTDFYFSKEEDRG
                     YINQLSFQVNSVAAVLEIDSFEIDIAKLILPRPLPPHSSISITTPFHEKLPYNFSRGG
                     HVGQTYQLTQWFPKPAVYDRKGWHPIPYLDQGEFYSEFGNWEVNITVPDNYIVAASGD
                     LQDRSELEHLKEIGKQKPSSQNNYKLFQQLVTSVEKKERPAPEKLMPPSSKNLKTLTY
                     VLNDAHDFAWFASKLFLVQHDTLQIKDHTIDVLSYYNPWDEEYWRNSLKYMKDAVRFY
                     SKKIGAYPYNNVSAVAGNDAMNSGGMEYPTITLITMTGSQQDLDATLAHEIGHNWFYG
                     ILGTNERDHAWMDEGINEFYQQEYENEKYGTNSDMYVSKGRFLEHRVPPNYNEVQIAT
                     LEKMRKDQPIDTTSLAFTETNYGLIVYDKTPVWMRQLRHQLGTSGFDSSVKYYYEQWK
                     FKHPYPEDFKHAIEQASGVKIDSLYSRIFTTGPIRKYPQPKSVKPATFFNFTKTDKYN
                     YISFLPAVGYNNYDKFMIGAMVHNYQLPLNRFAFIGSALYATGSNRLNGFGRLSFNTF
                     QRRYWLETSVSAATFSFDSYADEKNGPVYLRVQKMVPSVKLVLYNKDLRSTQRTILQA
                     RTFLLNEDELLFKTVTYPQDTFDVVTTEPVHSYINQLNVTLLDCRVLYPYSANLTVDQ
                     GKQFIRAGFTGKYFFNYSDNNDGLNIRFFAGKFFYLESKTSISAFETDRYHLTLTGPR
                     GYEDYTYSNYFVGRSEFEGLKSQQLMARDGFFKVGTDLLNEKIGKTDDWLMALNFAAD
                     IPKLHGVSLLPFKLPIKIFADIGTYSDAWQDNTSARFLYDAGIQVSILRSFVNVYVPI
                     LYSKVYSDYFKSTLGDSYFWKTIAFDINLDFFKINNLSNKIPL"
     gene            2952..3845
                     /locus_tag="VEV83_23000"
     CDS             2952..3845
                     /locus_tag="VEV83_23000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48070.1"
                     /translation="MELEILSSTQINREKWDACISMSTNTLVYATSAYLDTMADNWDG
                     FIADDYRLVMPVPWRKKFGVKYYYDVPFVQQLGVFGGSPGAEEIDLFKTQLQRSYRYG
                     DYSFNYGNAIDAKRCNNYILPLSSRYEVSKQFYSSNLSGSLSRINEDKLQYLPADSQE
                     AIAIFRQLYGKRFAHVTENDYNNFASLCKLKEQENKLIVRKVCAGSEVLSIALFIKDE
                     RRIYNLMPSTTENGRQQLAGHFLFDSVIREFSHTGMMLDFEGSDIPGIENFYAGFGAV
                     NQPYFKLHFNRLPILLRVFKR"
     gene            complement(3825..4562)
                     /locus_tag="VEV83_23005"
     CDS             complement(3825..4562)
                     /locus_tag="VEV83_23005"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012789203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HYK48071.1"
                     /translation="MQKHIVQAPEKLLSLFPMKKFAVIVAGGTGSRMGNTVPKQFLLL
                     KDKPVLWYTLDTFLRAYDDMEIILVLPAPFVENGKAIAASFAEHDRIKIVTGGDTRFH
                     SVQCGLRHVAENSVVFVHDAVRCLISVPLIHRCYKQAIEKGSAIPAVPATDSIRILNG
                     THHHVAEREQVRIIQTPQTFLSDIILPAFQQEYNDVFTDEATVVEADGTNVFLTEGEY
                     ENIKITRPVDMMIAERILEERSALKDT"
     gene            4771..>6930
                     /locus_tag="VEV83_23010"
     CDS             4771..>6930
                     /locus_tag="VEV83_23010"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HYK48072.1"
                     /translation="MKKIFALVFSCVLGFIYLHAQTNTFPSTGSVGIGTVSPDASSVL
                     DITSTTKGVLISRMTKAERDLITSPASGLLIYQTNSTPGFYYYDGTSWTAVSPKGVNK
                     SLSNLTAPTAVNQSLVPGASGSIDLGSAVNQWRNAYFSADALINGLTVGRGAGNGFQS
                     TAVGFQALYSNTSGQYNAATGNQALNKNSTGSYNTANGYRSLLANTQGNYNTATGGLS
                     LYFNTTGNQNTSNGVQSLYSNIGGNNNTAIGVQSLYSNTSGSNNTASGFGALTLNTTG
                     PGNTANGVSALYYNTTGSNNVAIGIGALYLNETSSNLVAVGDSALYNNAGSYNTALGS
                     KVLNKNTTGGYNTATGFQALRANTTGSYNTADGFIALSSNTTGTDNSAFGWSALSGNT
                     TGNYNVAIGETSAFHNTTGSHNVGIGYYALSTNTTGIYNTAVGDGADVSAGNLNTATA
                     IGVGAIVNASNKVVIGQNIAGIVIGGYANWSNLSDGRFKENIKEDVPGLKFITKLRPV
                     TYTINSQKLEEHIMQNMPDNIKAARKQTPEQYAKAKSKIQTGFVAQEVEKTAKEIGYN
                     FDGVNVPQNETDNYSIAYSQFVVPLVKAVQELSKMNDDKDARISDLEARLTKLETMMN
                     TQSSSSDQTTSNVKLETSNITLSQNTPNPFHGATTIIYSLPQQYSSAKMIVTDKAGRV
                     IKEVNLSGSGKGILTVDASAISSGTYQYSLYVDGRLID"
BASE COUNT         2134 a         1476 c         1491 g         1829 t
ORIGIN      
        1 tggaaaaaag tttaaacatg ggcgttgacg atttgttcgc gctgctgcag catgaaggga
       61 actttaaata gcaattatgc agaagatgaa aaaactactg catttaattt tttttatcct
      121 tacttttttt ctttcacacg cacaaaaaac ctattggcaa caacaggtaa attatcacat
      181 tgacgttaag cttaatgata ccgataacag tttgacggca tttgaaaaaa tgcaatacat
      241 caacaactcg cccgatactt tattttatat ctggtttcat ctttggccaa atgcatataa
      301 gaatgaccgc acggccttta gcgaacagtt gttaaaaaac ggatcgaccg atttttattt
      361 ttctaaagaa gaggatagag gttatatcaa ccaactgagt tttcaagtga acagtgttgc
      421 ggcagttttg gaaatcgatt cgtttgaaat cgatatagct aagctgatcc tgccacgccc
      481 tttgccgcca cacagctcca tcagtatcac gactccattt catgaaaaac tgccttacaa
      541 tttttcaaga ggcggacatg tagggcagac ttaccaatta acgcaatggt ttccgaagcc
      601 ggcggtttat gatcgcaaag ggtggcatcc aatcccttat ttagaccagg gcgaatttta
      661 tagtgaattc ggaaactggg aagtaaacat cacggttccg gacaactaca ttgtagctgc
      721 atcgggcgac ttacaggaca gatcagaatt agagcatctg aaagaaatcg gaaaacaaaa
      781 gccatcgtct cagaacaact acaaattatt ccagcagcta gtaaccagcg tggaaaaaaa
      841 agaaagacca gcgccggaaa agctgatgcc gccatcgtca aaaaatctaa aaacgcttac
      901 gtacgtttta aacgatgcgc acgattttgc ctggttcgcc agcaaactgt ttttggtgca
      961 acatgatact ttgcagataa aggatcatac tatcgacgta ctctcttatt ataacccgtg
     1021 ggacgaagaa tattggagaa acagccttaa gtacatgaaa gacgcagtgc gcttttattc
     1081 aaaaaaaatc ggtgcatatc catacaataa tgtaagcgcg gttgccggga acgatgcgat
     1141 gaacagcggt ggcatggagt atccgaccat caccttgatt actatgactg gaagccaaca
     1201 ggacctggac gcaacactgg ctcatgagat cgggcataat tggttttacg gaattttagg
     1261 aacgaacgaa agggatcatg cctggatgga tgaagggatc aacgaatttt atcaacaaga
     1321 atacgaaaac gaaaagtacg gaacaaattc tgacatgtat gtgagcaaag gtcgatttct
     1381 ggaacatcgg gttccgccaa actacaatga ggttcagatt gccacgcttg aaaaaatgag
     1441 aaaggaccag ccgatcgaca caacgtcgct tgcattcaca gaaaccaact atggtttgat
     1501 cgtttacgac aaaacgccgg tgtggatgcg gcaattaaga catcagctcg gaacgtctgg
     1561 gtttgacagt agtgtgaagt attattatga gcaatggaaa ttcaaacatc cgtatcctga
     1621 agatttcaaa catgcaatag agcaggcaag tggtgtgaaa attgattctc tttacagcag
     1681 gatttttaca accggaccaa taagaaaata tccgcaacca aaatcagtta agccggcaac
     1741 gtttttcaat tttacaaaaa ctgacaagta taattatatt tcatttcttc cggctgttgg
     1801 atataacaac tatgataaat tcatgatagg cgcgatggtt cacaactacc agttaccgct
     1861 aaatcgtttt gctttcatcg gtagcgcttt gtatgcaacc ggatcgaata gactgaacgg
     1921 attcggccgg ttatcattca acacatttca gaggcgatac tggcttgaaa catctgtaag
     1981 cgcagcaaca ttttctttcg acagctacgc cgatgaaaag aatgggccag tttacctgcg
     2041 tgttcaaaag atggttccat ccgtaaaatt ggttttgtat aataaagacc tgaggtcaac
     2101 acaaagaaca attttgcagg cacgaacttt tttgttgaat gaggatgagc tactgtttaa
     2161 aactgtgact tatccgcagg acacatttga tgtggttaca acggaaccgg tgcattcata
     2221 catcaaccag ttgaatgtta ctttgcttga ttgccgcgtg ttgtacccct atagcgcaaa
     2281 ccttactgtc gaccagggaa aacaatttat tcgtgccggc ttcacgggaa aatatttttt
     2341 caactatagt gacaataacg atggattgaa tatccggttt ttcgccggta aattttttta
     2401 cctggaatcg aaaaccagca tctcagcgtt tgaaacagat cggtatcatc taactttaac
     2461 cggcccgaga ggatatgaag attatacgta cagcaattac tttgtggggc ggagtgaatt
     2521 tgaaggttta aaaagccagc agctcatggc aagggatggg tttttcaaag taggcaccga
     2581 tctgctgaac gaaaagattg gcaaaacaga cgactggtta atggcgttaa attttgctgc
     2641 ggacatcccg aaattgcatg gagtaagcct gctgccgttt aagctaccta tcaagatctt
     2701 tgcagatata ggaacgtata gcgatgcatg gcaggacaat accagtgcaa gatttttata
     2761 tgatgcgggg attcaggttt ccatattgcg atcgttcgta aatgtgtacg tacccattct
     2821 ttacagtaaa gtttatagcg attactttaa atcaacactt ggagacagtt acttttggaa
     2881 aacaattgcg ttcgatatta accttgattt tttcaaaata aataacttaa gtaacaagat
     2941 acccttataa aatggaatta gaaatccttt catccacaca gatcaacagg gagaaatggg
     3001 acgcatgcat ttcgatgagc acgaacacgc ttgtttatgc gacctccgca tatctcgaca
     3061 ctatggctga taactgggac ggatttattg ccgacgacta caggttggtg atgccggtac
     3121 catggcggaa aaaatttggc gttaaatatt attatgatgt tccttttgtg cagcaattgg
     3181 gtgtgtttgg aggaagtccc ggcgcagaag agatcgatct ctttaagacg cagttacaaa
     3241 gatcgtatcg gtatggcgac tattctttca actacggcaa tgcgatcgat gcaaagcgtt
     3301 gcaacaatta cattttgccg ctttcctccc gctatgaagt gagcaaacaa ttttattcat
     3361 cgaatctcag cggaagcctt tccaggatca acgaagataa attgcaatat ctgcctgccg
     3421 attcacagga ggcaattgcg attttcaggc aactctatgg aaaaagattt gctcacgtta
     3481 cagaaaacga ctacaacaat tttgcaagcc tttgcaagct aaaagagcag gaaaacaagt
     3541 tgatcgtaag gaaagtttgt gcaggcagtg aggtgctttc gattgccttg ttcataaagg
     3601 acgagcggag aatttacaac ctgatgccct caactaccga aaacgggagg caacagttgg
     3661 ccgggcattt tctttttgat tcggtaataa gagaattttc tcataccggg atgatgctcg
     3721 attttgaagg ttcggacata cccggcatcg aaaattttta tgctggtttc ggagcagtga
     3781 atcagccata tttcaaactt cattttaaca ggctgccgat cttattacgt gtctttaagc
     3841 gctgaacgct cttcgagaat tctttcggcg atcatcatgt ccacaggccg cgtgatcttt
     3901 atgttctcat attcaccttc agtcaaaaaa acatttgttc catcggcctc gacaacagtg
     3961 gcctcatcgg tgaaaacgtc gttatattcc tgttgaaaag caggtaaaat gatatcgctc
     4021 aaaaaagtct gaggcgtttg aataatgcgc acctgctctc tttcggcaac atggtgatgt
     4081 gtgccattca aaattcgaat gctatctgtc gccggaactg cagggatggc gcttcctttt
     4141 tcaatagctt gtttatagca tcgatgaatt aatggaacgg agatgaggca tcgcactgcg
     4201 tcgtgtacaa aaaccacaga attttcagca acatgccgca aaccacattg caccgaatga
     4261 aacctggtat cgccgccggt aactatcttg attcgatcgt gctccgcaaa ggaagcggcg
     4321 atcgccttcc cattttctac aaacggtgcc ggcaacacga ggattatttc catatcgtca
     4381 taagcgcgca gaaaagtatc gagcgtatac cataacacgg gcttatcttt caacaacagg
     4441 aattgtttag gaacagtgtt gcccattctt gatcccgtac cgcctgctac tattactgca
     4501 aactttttca tcggaaacaa agaaagcaat ttttcgggtg cttgtacaat atgcttctgc
     4561 aagccggcgc aggaattttt ttgtaacgtc gttcgtaatt ctcaataagc tccagtggat
     4621 tttcgcaaaa gccacttaat aagataatac cgccagttac tcatgccttt tgttttcagg
     4681 gctgcttcat aactattttt cctctggttt tatttattca caaaaaatca tcagatcaaa
     4741 acaaaatttt tacaaccaaa cattacaacg atgaaaaaga tatttgctct tgtgttttca
     4801 tgcgtgctgg gtttcatata cctccatgct caaacaaata catttccttc cacaggttcg
     4861 gtaggtattg gcacggtttc gcctgatgca tcgtcggtgc ttgatattac atcaacaaca
     4921 aaaggcgttt tgatttcccg aatgaccaaa gcagagcgcg accttattac atcacctgca
     4981 tcgggtttat tgatctacca aaccaatagc acgcccggct tttattatta cgatggcacc
     5041 tcatggacag ccgtttcgcc aaaaggtgtg aacaaatcac tttccaacct cactgcaccc
     5101 accgcagtaa atcagagtct cgttccggga gctagtggtt caatcgacct tgggtcggct
     5161 gtaaaccaat ggagaaatgc ttatttcagc gcggatgcac tgatcaatgg tcttaccgta
     5221 ggccgcggcg ccggtaacgg atttcaaagt acagctgttg ggttccaggc actttatagt
     5281 aacaccagtg gacaatataa cgctgctacg ggaaaccagg cactcaataa aaacagtact
     5341 ggtagctaca atactgcgaa tggttaccgc tcattgttgg cgaacacaca agggaattat
     5401 aacaccgcta ccggaggcct gtcgctttat ttcaacacga ctggtaatca gaatacaagt
     5461 aatggcgtgc agtcgctgta ttctaatatt ggaggaaata acaatactgc catcggcgta
     5521 cagtcgcttt atagcaacac tagcgggagt aacaacactg cgagcgggtt tggggcgtta
     5581 acgctcaaca ctaccggccc aggcaacacg gcaaacggcg tctcggcgct ttactacaat
     5641 actactggtt ccaataatgt agctatcggt atcggtgcgc tttatttaaa tgagacttca
     5701 tcgaatcttg tagccgtagg tgattctgct ttgtacaaca acgccggttc ttataacaca
     5761 gccttaggta gcaaagtgct taataagaac acgaccggtg gttataatac agccacagga
     5821 ttccaggccc ttcgtgcaaa cactacgggt tcttataaca cagctgacgg atttattgct
     5881 cttagcagca ataccactgg caccgataac tcagcgtttg gatggtcggc gctttcggga
     5941 aacaccacag gcaattataa tgttgcaatt ggtgagactt ctgcatttca caatacaact
     6001 ggaagccata atgttggcat cggctattat gcactatcca caaacacgac cggcatttac
     6061 aacacggccg ttggtgacgg agcagatgtt agcgctggca atttaaacac tgcaacggca
     6121 atcggcgtcg gtgctatcgt taacgccagt aataaagttg ttattggtca gaacatcgca
     6181 ggcatagtaa taggtgggta tgctaactgg agtaacttaa gcgatggcag gttcaaagaa
     6241 aatataaaag aagatgtgcc cggcctgaag ttcattacta agctgcgccc ggttacttac
     6301 accataaata gtcaaaaatt agaagagcat attatgcaga acatgcctga taatattaaa
     6361 gccgcgagaa agcaaacacc cgaacaatat gcgaaagcaa aatctaaaat acaaaccggc
     6421 tttgtagcac aggaagtaga aaaaacagcc aaagagatcg gctacaattt tgatggagtg
     6481 aacgtaccgc aaaacgaaac agacaattac agcattgctt acagccaatt tgtggtgccc
     6541 cttgtaaaag cagtacagga actttcaaaa atgaacgatg ataaagatgc aaggatcagc
     6601 gacctggaag cgagattaac aaagctcgaa acaatgatga atacacaatc ctcttcatca
     6661 gaccaaacga cctcaaacgt caaactcgaa acgtcaaaca ttactctgtc acagaacaca
     6721 cccaatccat tccatggcgc cacgacaata atttacagct taccgcaaca atattcatca
     6781 gcaaaaatga ttgtcactga taaagcagga agagttataa aagaagtaaa cctttcagga
     6841 agcgggaagg gaattttgac ggttgatgca tctgcgattt catcgggcac ttaccagtat
     6901 tcattatacg tagacggcag attgatcgat
//
LOCUS       DASQJI010000888         4224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Parafilimonas sp. isolate SMAG_U11882 k141_1688383,
            whole genome shotgun sequence.
ACCESSION   DASQJI010000888 DASQJI010000000
VERSION     DASQJI010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945605
            Sequence Read Archive: SRR6831646
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Parafilimonas sp. (soil metagenome)
  ORGANISM  Parafilimonas sp.
            Bacteria; Bacteroidota; Chitinophagia; Chitinophagales;
            Chitinophagaceae; Parafilimonas.
REFERENCE   1  (bases 1 to 4224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 08:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 40
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 35
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4224
                     /organism="Parafilimonas sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688383"
                     /isolate="SMAG_U11882"
                     /isolation_source="soil"
                     /db_xref="taxon:1969739"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.1613 N 96.6752 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VEV83_23015"
     CDS             <1..444
                     /locus_tag="VEV83_23015"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HYK48073.1"
                     /translation="LAAGKPFVNNFLPNGGDMLRVNMAVPATPRNDPKFNSLGLVQAA
                     VLGLTDPEYDTSTALQFIPNMDGFPNGRRLEDDVTRIELQAVGGVVLAAIGLPYDDYV
                     QGGSLVTPDLVSVLNYSTGVNHNDTSFRAYFPFIQQPWRGTLVKN"
     gene            457..2526
                     /locus_tag="VEV83_23020"
     CDS             457..2526
                     /locus_tag="VEV83_23020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018615332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HYK48074.1"
                     /translation="MKKLLYQILFIAMFCGSTLPGIASSHREAPLISNDPLADNTDLY
                     AFRDPRNANMVTIIACYVPFQLPQGGPNYYNFGENIRYEIHIDNNVATAGDDIIYRFT
                     FKKVNEDPTTFFDIRLGLENNKTFYRVERSIDGGKSFQTIVDKGVVPPPNIGPRSISS
                     PVGLNVPNYRHLMAKAEMIATTGENIFCGSADDPFFVDLGGIFDLGNAPRRGENSNPP
                     YDGLKCKNVSAIAIQVDISTLQKDHKSVSMAANILDPDFVIGVWASASRQSTRVLGEN
                     GRQKYSGDWVQVSRLGMPLTNEAVVPVGYKDLWNSLTPYQDLAYLGTFGNFFYNPELA
                     LYMDDTQFGSAVPAFEPLRVQRNSLGTYGFGDGQNGLYPLKGTQAVAGTALDDAIFGT
                     LLLPGPNEPRSVDLWPAFHTGVPNLAPYQLATGKNGNPLAAGKPFVNNFLPNGGDMLR
                     LNMAVPTTPRNNPDFSSEGLISAAVLGLTDPRFNTTTALQFIPNMDGFPNGRRLEDDV
                     TRIELQAVAGVVLAAIGLPYDDYDGSSLVTQDLLDVLTYSTGINANDTTFRHEFPYVQ
                     TPWSGSDACCGLGVSQEGNKPVIQSSPQQMSNLGISTPLSVASASPNPFVNNLVIRYH
                     LETTSNTTVAIYDASGRMVKSLVNQKQNAGTYSVTWNASGQPGGIYFVYTVINGKPTQ
                     SLRIVKQ"
     gene            2614..3960
                     /locus_tag="VEV83_23025"
     CDS             2614..3960
                     /locus_tag="VEV83_23025"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYK48075.1"
                     /translation="MKKKFLYATFSGIFAITVIAILFSYRSKQDKEANVNYPLLKRAG
                     SSAETDEWKATYTKGTQLYNAILQNSTDNKSRITLAGLFIKEARATGNYAYYDKAALK
                     YVNDVLKNDSLDFDATVLKSYLYISQHHFADGLSIAEKARRINPYNSFVYGLLVDGNV
                     EMGNYDSAVSMAQHMVDLRPDIRSYSRVSYLREIYGDYPGSIAAMKMAVEAGVPGDEG
                     TEWARIQLAHLYENTGEIKNAEMQYQIALAERPGYAYALAGLAKLDTYKKDYAGAIAL
                     YTKADSLITDASIQESLAEVYALSGNTAKAEELTRKVIDEMNETAQSGQSDENIGHYV
                     DKELAYAYIKIKDYDKAIEHATLEYNRRPMNIDVNEALAWAYYNKGYCATALSYIEAA
                     LKTNSKNPTLLCYAGLIYAKNGNLSKAKSLLQEGLHNHPLIAADLLIQSEDVLKSM"
     gene            4005..>4224
                     /locus_tag="VEV83_23030"
     CDS             4005..>4224
                     /locus_tag="VEV83_23030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYK48076.1"
                     /translation="MRTLFSIMTKYKPRISLLVTCLLLGSLTSVNAHPVVNYALANAP
                     VGQVAWYYIKMGITHIIPNGFDHILFIVS"
BASE COUNT         1248 a          929 c          980 g         1067 t
ORIGIN      
        1 cttgcagccg ggaaaccatt tgtaaataat tttttaccca atggtggaga catgctgcgt
       61 gtgaatatgg ctgtaccggc aacgccacga aacgatccga aattcaattc tcttggactt
      121 gtgcaggcgg ccgtgttagg attaactgat cccgaatacg acacaagcac cgcattgcaa
      181 tttattccaa acatggacgg atttccgaac ggaagaagat tagaggatga cgttacaaga
      241 attgaattgc aggcagtggg tggagtggtg ttggcagcca tcggtttgcc gtacgacgat
      301 tatgtgcaag gcggatctct cgttacgcct gaccttgtca gcgttctaaa ctattcaacc
      361 ggcgttaacc acaacgacac aagttttcgc gcttattttc cttttatcca gcaaccgtgg
      421 agaggaacgc ttgtgaaaaa ttaaaaagaa aaaatcatga aaaaactatt atatcaaatc
      481 ttattcatcg cgatgttctg cgggtcgaca ttgccgggta tcgcatcaag ccacagggaa
      541 gctccgctta tttcgaacga tccgctggcg gacaacacag acctgtatgc atttcgtgat
      601 ccacgcaacg cgaacatggt tacgatcatc gcgtgttatg tgccgttcca gttgccacag
      661 ggcggtccta actattacaa tttcggtgag aacatccggt acgaaatcca catcgataac
      721 aacgttgcaa cagccggaga cgatatcatc tacaggttca cgttcaagaa agtaaatgaa
      781 gacccgacaa ctttctttga tatccggctc gggcttgaaa acaacaaaac tttttacagg
      841 gtcgaaagaa gtatcgatgg aggaaaaagt tttcaaacga tcgttgacaa aggtgtggtg
      901 cctccgccca acatcgggcc acgctccata agctcacccg taggattaaa tgttccgaat
      961 tatcggcacc tgatggcaaa agccgaaatg atcgcaacta ccggggaaaa cattttttgt
     1021 ggctctgcag atgatccttt tttcgttgat cttggaggaa tatttgattt aggtaatgcg
     1081 ccacggcgcg gcgaaaattc gaatcctccc tacgatgggt tgaaatgcaa aaatgtttct
     1141 gcgatcgcca tccaggttga tatttcgact ctgcagaaag atcataaatc tgtgagtatg
     1201 gctgcgaaca tcctggaccc cgattttgtt attggcgttt gggcttctgc aagccgtcaa
     1261 tcaacgcggg tacttggaga aaacggaaga caaaaatata gcggcgattg ggtgcaggtt
     1321 tcacgtcttg gcatgccttt aaccaacgaa gcggttgttc cggttggata taaggactta
     1381 tggaattcat tgacccctta ccaggacctt gcttacctcg gtacttttgg aaatttcttt
     1441 tacaatcctg agttggcctt atacatggat gacacgcagt ttggcagcgc ggttccggct
     1501 ttcgagcctt tgcgtgttca gagaaattct ttgggaacat atggctttgg cgatgggcaa
     1561 aatggtttgt acccgttaaa aggaacacaa gctgtggcag gcacggcatt agatgacgcg
     1621 atatttggga cactgttact gcccggtccg aatgagcctc gttctgtaga tctatggccg
     1681 gcatttcata ccggtgttcc gaatctcgcc ccttatcaac tggcaaccgg gaaaaatgga
     1741 aacccgttgg cagcaggaaa accattcgta aacaatttcc ttccgaatgg cggggatatg
     1801 ctgcgactaa acatggctgt tccgacaacg ccaagaaaca atcctgattt tagttcagag
     1861 ggattgatat cggcagcagt attaggattg acagatccaa gatttaatac aacaacggct
     1921 cttcaattca taccaaacat ggatggattt ccgaacggaa gaaggcttga agatgatgta
     1981 acgcggatag aattgcaagc tgttgccggc gtagtactcg ctgctatagg gttgccatat
     2041 gatgactatg atggcagtag tttggtcaca caagatctgt tggatgtgct tacttactca
     2101 acgggcatca atgcgaatga cacaactttc cggcatgagt ttccttacgt gcaaacaccc
     2161 tggtccgggt ctgatgcatg ctgcggctta ggtgtttcgc aggaaggtaa taaaccggtc
     2221 attcaatcgt cgccgcaaca gatgagcaac ctcggtataa gcactccgct gtcagttgca
     2281 agtgcatcac caaatccatt cgtgaacaac ctggtcattc gatatcatct tgagacaaca
     2341 tccaacacca ctgttgcgat ctatgatgca agcggaagaa tggttaagtc gctcgtaaat
     2401 cagaaacaga acgcgggcac ttattcggta acatggaatg cgtccgggca gcccggtgga
     2461 atttattttg tgtataccgt catcaacggc aaaccgactc aaagcttgcg cattgtaaag
     2521 caatagctcg caaaagcaaa gcaggcaaat tcctgctttg cttttttaaa aaaccgcgcg
     2581 acaaaaaatt tacttcgttt tcaatttttc agcatgaaaa agaaattcct ttacgcaaca
     2641 ttctcgggca tctttgcaat tacagtcatt gcgatcttgt tctcatacag aagcaagcag
     2701 gacaaagaag ccaatgtgaa ttacccattg cttaaacgtg ccggctcttc agcagaaacc
     2761 gacgagtgga aagccactta cactaaaggc acacaattat ataatgccat cttgcaaaac
     2821 tccacggaca acaaatcgag gatcacactt gctggtttat tcattaagga agcacgcgca
     2881 acaggcaatt atgcttacta tgataaggca gcgctaaaat atgtaaacga tgttctgaag
     2941 aatgacagtc ttgatttcga tgccacggtt ttaaaatcat atctatacat atcacaacac
     3001 cattttgcgg atggactttc gattgcagaa aaagcgcgca ggatcaatcc ctataattct
     3061 tttgtgtatg gattattggt tgatggaaat gttgaaatgg gaaattatga ttccgcagtc
     3121 tccatggctc aacacatggt tgacctgcgg cctgacattc gatcatattc gcgcgtttca
     3181 tatttacgcg agatatatgg agattatcca ggctctattg cggctatgaa aatggcagtg
     3241 gaagccggcg tgccgggcga cgaaggaacg gaatgggcgc gaattcaact ggcacatctt
     3301 tatgagaaca ccggggaaat aaagaatgcg gaaatgcaat atcaaatcgc cttagcagaa
     3361 cgacctggtt atgcatatgc gctcgccggc ctggcaaagc tggatacgta taagaaagat
     3421 tatgccgggg caatagcgtt atacactaaa gcagattcat tgataacaga cgcttctata
     3481 caggaatcac ttgctgaagt ttatgcttta tcaggcaaca ccgcaaaagc agaagagctt
     3541 accaggaaag tgatagacga aatgaatgaa acggctcaaa gcggacagag cgatgagaac
     3601 attggccatt atgtagacaa agaactggcg tatgcttata tcaaaataaa agattatgat
     3661 aaggcaatcg aacatgcaac acttgagtac aaccgccggc caatgaatat cgacgtgaac
     3721 gaagccctgg cgtgggcgta ctacaacaaa gggtattgcg caacagcatt atcttatata
     3781 gaggctgcgt taaaaacgaa cagcaagaat ccaaccctgc tttgctatgc agggctgatc
     3841 tacgcaaaaa acggaaacct ctcaaaggcg aaatcgttat tacaggaggg attgcacaat
     3901 cacccgctca tcgctgcaga tttattaatt caaagcgaag atgttttgaa gagtatgtga
     3961 atttaataat gacagccaaa cggaatgcaa tatcaaatca caacatgcga accctctttt
     4021 caatcatgac aaaatataaa ccgcggatct cgctgttggt aacgtgcttg ctacttggta
     4081 gtctcacgag cgtaaacgcg cacccggtgg taaactatgc tctcgcaaat gcacctgttg
     4141 gccaggtagc atggtactac ataaaaatgg gtatcaccca tataattcct aatggatttg
     4201 atcacatact ttttatagtt agcc
//
